Query 044091
Match_columns 275
No_of_seqs 141 out of 1103
Neff 5.6
Searched_HMMs 29240
Date Mon Mar 25 19:48:27 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/044091.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/044091hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4h8e_A Undecaprenyl pyrophosph 100.0 2.3E-68 8E-73 485.2 20.0 189 85-275 15-203 (256)
2 3sgv_B Undecaprenyl pyrophosph 100.0 5.8E-68 2E-72 481.9 17.8 184 90-275 13-196 (253)
3 3ugs_B Undecaprenyl pyrophosph 100.0 4.9E-65 1.7E-69 455.9 20.1 173 92-275 4-176 (225)
4 1f75_A Undecaprenyl pyrophosph 100.0 2.2E-65 7.4E-70 465.3 16.7 185 89-275 15-199 (249)
5 2vg3_A Undecaprenyl pyrophosph 100.0 7.5E-65 2.6E-69 468.5 19.6 190 84-275 45-234 (284)
6 3qas_B Undecaprenyl pyrophosph 100.0 1.3E-64 4.4E-69 460.9 17.6 187 87-275 6-196 (253)
7 2d2r_A Undecaprenyl pyrophosph 100.0 1E-64 3.4E-69 459.9 16.6 181 92-275 13-193 (245)
8 2vg0_A Short-chain Z-isoprenyl 100.0 5E-64 1.7E-68 451.0 17.4 179 93-275 1-184 (227)
9 2zds_A Putative DNA-binding pr 77.5 7.3 0.00025 34.2 7.9 68 121-188 107-180 (340)
10 3dx5_A Uncharacterized protein 76.2 11 0.00038 32.2 8.5 113 120-237 79-192 (286)
11 3tc3_A UV damage endonuclease; 74.6 16 0.00055 33.7 9.5 105 122-230 57-175 (310)
12 1tz9_A Mannonate dehydratase; 74.1 7.1 0.00024 35.6 7.0 35 119-154 89-124 (367)
13 2hk0_A D-psicose 3-epimerase; 73.6 7.4 0.00025 34.0 6.9 69 120-188 102-171 (309)
14 3cny_A Inositol catabolism pro 73.5 18 0.00062 30.9 9.3 69 120-188 85-161 (301)
15 2wkj_A N-acetylneuraminate lya 73.2 44 0.0015 30.0 12.1 106 122-240 29-137 (303)
16 3bdk_A D-mannonate dehydratase 71.5 14 0.00048 34.8 8.6 117 118-236 97-277 (386)
17 3s5o_A 4-hydroxy-2-oxoglutarat 70.3 42 0.0014 30.2 11.2 106 122-239 32-141 (307)
18 2ehh_A DHDPS, dihydrodipicolin 70.0 55 0.0019 29.1 11.9 106 122-239 18-125 (294)
19 3qc0_A Sugar isomerase; TIM ba 70.0 31 0.0011 28.9 9.8 112 119-236 77-195 (275)
20 1f6k_A N-acetylneuraminate lya 69.3 61 0.0021 28.8 12.2 106 122-239 21-129 (293)
21 2yxg_A DHDPS, dihydrodipicolin 68.7 54 0.0019 29.1 11.5 106 122-239 18-125 (289)
22 3cpr_A Dihydrodipicolinate syn 68.1 67 0.0023 28.7 13.1 106 122-239 34-141 (304)
23 3b4u_A Dihydrodipicolinate syn 67.9 26 0.00089 31.3 9.3 105 122-239 21-129 (294)
24 3vni_A Xylose isomerase domain 67.3 9.2 0.00031 32.9 5.9 67 119-188 82-152 (294)
25 2qul_A D-tagatose 3-epimerase; 66.4 29 0.001 29.4 9.0 68 120-187 83-152 (290)
26 2j6v_A UV endonuclease, UVDE; 64.6 36 0.0012 30.6 9.5 59 122-188 58-123 (301)
27 1ydo_A HMG-COA lyase; TIM-barr 64.2 72 0.0025 28.7 11.5 96 131-237 87-197 (307)
28 2vc6_A MOSA, dihydrodipicolina 64.1 20 0.00068 32.0 7.7 106 122-239 18-125 (292)
29 3m5v_A DHDPS, dihydrodipicolin 63.5 76 0.0026 28.3 11.5 107 122-239 25-133 (301)
30 3l23_A Sugar phosphate isomera 63.2 16 0.00055 32.1 6.8 60 120-186 103-164 (303)
31 1xky_A Dihydrodipicolinate syn 63.1 70 0.0024 28.6 11.2 106 122-239 30-137 (301)
32 2v9d_A YAGE; dihydrodipicolini 62.7 51 0.0017 30.2 10.4 106 122-239 49-156 (343)
33 2ojp_A DHDPS, dihydrodipicolin 61.9 70 0.0024 28.4 10.9 105 122-238 19-125 (292)
34 1i60_A IOLI protein; beta barr 61.1 61 0.0021 27.0 9.9 65 120-188 79-143 (278)
35 2r91_A 2-keto-3-deoxy-(6-phosp 61.0 53 0.0018 29.1 9.9 103 122-239 16-121 (286)
36 1o5k_A DHDPS, dihydrodipicolin 60.7 59 0.002 29.1 10.2 105 122-238 30-136 (306)
37 3na8_A Putative dihydrodipicol 60.5 27 0.00094 31.6 8.0 106 122-239 42-149 (315)
38 3qxb_A Putative xylose isomera 60.1 18 0.00063 31.6 6.6 67 119-186 108-177 (316)
39 1w3i_A EDA, 2-keto-3-deoxy glu 60.1 62 0.0021 28.8 10.2 103 122-239 17-122 (293)
40 3d0c_A Dihydrodipicolinate syn 59.9 61 0.0021 29.2 10.2 104 122-239 30-136 (314)
41 2ftp_A Hydroxymethylglutaryl-C 59.5 67 0.0023 28.6 10.3 97 129-236 87-198 (302)
42 2rfg_A Dihydrodipicolinate syn 59.4 21 0.00072 32.0 7.0 106 122-239 18-125 (297)
43 2cw6_A Hydroxymethylglutaryl-C 59.1 94 0.0032 27.5 11.2 98 131-239 86-198 (298)
44 2r8w_A AGR_C_1641P; APC7498, d 59.1 78 0.0027 28.8 10.9 105 122-239 52-159 (332)
45 3u0h_A Xylose isomerase domain 58.8 32 0.0011 29.0 7.7 63 120-187 79-141 (281)
46 3fkr_A L-2-keto-3-deoxyarabona 58.8 80 0.0027 28.3 10.8 122 122-256 26-159 (309)
47 2ksn_A Ubiquitin domain-contai 58.4 8.9 0.0003 31.4 3.8 24 220-243 50-73 (137)
48 3aam_A Endonuclease IV, endoiv 58.2 83 0.0028 26.4 11.7 103 126-240 15-129 (270)
49 3si9_A DHDPS, dihydrodipicolin 57.9 38 0.0013 30.7 8.4 106 122-239 40-147 (315)
50 3qze_A DHDPS, dihydrodipicolin 57.8 1.1E+02 0.0037 27.6 11.6 106 122-239 41-148 (314)
51 3qfe_A Putative dihydrodipicol 57.7 74 0.0025 28.7 10.4 106 122-239 29-138 (318)
52 2q02_A Putative cytoplasmic pr 57.5 83 0.0028 26.2 10.9 20 127-146 21-40 (272)
53 3q71_A Poly [ADP-ribose] polym 57.2 96 0.0033 26.8 11.2 39 125-163 135-173 (221)
54 3obe_A Sugar phosphate isomera 56.8 36 0.0012 29.9 7.9 59 121-186 110-168 (305)
55 3dz1_A Dihydrodipicolinate syn 55.8 1.1E+02 0.0036 27.5 11.1 107 122-240 26-132 (313)
56 3flu_A DHDPS, dihydrodipicolin 55.3 1.1E+02 0.0039 27.1 12.1 106 122-239 25-132 (297)
57 2nuw_A 2-keto-3-deoxygluconate 54.3 59 0.002 28.8 9.0 103 122-239 17-122 (288)
58 3ayv_A Putative uncharacterize 54.3 91 0.0031 25.9 9.9 68 119-188 70-137 (254)
59 3tva_A Xylose isomerase domain 54.2 40 0.0014 28.7 7.6 66 117-189 94-160 (290)
60 3a5f_A Dihydrodipicolinate syn 54.0 47 0.0016 29.5 8.3 105 122-238 19-125 (291)
61 3e96_A Dihydrodipicolinate syn 53.3 30 0.001 31.3 6.9 121 122-256 30-156 (316)
62 3oqv_A ALBC; rossman fold, cyc 52.3 22 0.00074 31.8 5.7 117 123-257 44-175 (247)
63 3eb2_A Putative dihydrodipicol 52.2 30 0.001 31.1 6.7 122 122-256 22-153 (300)
64 3ngf_A AP endonuclease, family 51.3 68 0.0023 27.1 8.6 64 119-187 87-150 (269)
65 3cqj_A L-ribulose-5-phosphate 51.0 17 0.00058 31.3 4.7 64 120-188 103-167 (295)
66 1olt_A Oxygen-independent copr 50.9 41 0.0014 31.7 7.8 46 107-152 196-247 (457)
67 3tak_A DHDPS, dihydrodipicolin 50.6 1.3E+02 0.0045 26.5 11.2 106 122-239 19-126 (291)
68 2q02_A Putative cytoplasmic pr 47.8 24 0.00082 29.6 5.1 57 123-187 83-139 (272)
69 3guv_A Site-specific recombina 47.7 77 0.0026 25.2 8.0 74 125-211 26-105 (167)
70 3daq_A DHDPS, dihydrodipicolin 47.1 1.5E+02 0.0052 26.2 12.3 106 122-239 20-127 (292)
71 3gqe_A Non-structural protein 46.9 37 0.0012 28.3 5.9 72 125-207 89-160 (168)
72 3hq1_A 2-isopropylmalate synth 46.8 1.7E+02 0.0059 29.5 11.8 113 127-239 151-274 (644)
73 1ydn_A Hydroxymethylglutaryl-C 46.7 1.5E+02 0.005 26.0 10.3 96 131-237 85-195 (295)
74 3pzj_A Probable acetyltransfer 46.6 41 0.0014 26.8 6.2 36 115-151 129-164 (209)
75 3kws_A Putative sugar isomeras 46.1 1.2E+02 0.0042 25.5 9.5 63 120-187 99-165 (287)
76 4dpp_A DHDPS 2, dihydrodipicol 45.0 1.5E+02 0.0051 27.6 10.4 105 122-238 77-183 (360)
77 3l21_A DHDPS, dihydrodipicolin 44.9 1.7E+02 0.0058 26.1 11.3 124 122-257 33-165 (304)
78 1k77_A EC1530, hypothetical pr 44.6 1.3E+02 0.0045 24.8 9.6 65 119-187 79-143 (260)
79 2eee_A Uncharacterized protein 43.4 62 0.0021 25.9 6.7 41 124-164 94-134 (149)
80 3ble_A Citramalate synthase fr 43.1 77 0.0026 28.8 8.1 99 130-239 101-211 (337)
81 3kh6_A Poly [ADP-ribose] polym 42.4 61 0.0021 27.6 6.8 48 124-171 114-162 (199)
82 3sig_A PArg, poly(ADP-ribose) 42.4 33 0.0011 31.0 5.3 41 124-164 197-237 (277)
83 3can_A Pyruvate-formate lyase- 42.2 46 0.0016 26.6 5.8 25 124-148 109-135 (182)
84 1bxb_A Xylose isomerase; xylos 42.1 25 0.00085 32.2 4.6 67 120-187 111-180 (387)
85 3h5d_A DHDPS, dihydrodipicolin 41.4 1.9E+02 0.0064 25.9 10.3 105 123-239 26-133 (311)
86 2jyc_A Uncharacterized protein 41.4 91 0.0031 25.4 7.5 41 124-164 105-145 (160)
87 1q1v_A DEK protein; winged-hel 41.3 23 0.00079 25.5 3.3 40 223-270 12-51 (70)
88 4abl_A Poly [ADP-ribose] polym 41.3 59 0.002 27.2 6.5 48 124-171 103-151 (183)
89 2hmc_A AGR_L_411P, dihydrodipi 40.8 2E+02 0.007 26.2 10.6 101 122-237 44-147 (344)
90 3rmj_A 2-isopropylmalate synth 39.8 2.3E+02 0.0078 26.2 10.8 104 125-239 87-199 (370)
91 3ivs_A Homocitrate synthase, m 39.0 2.2E+02 0.0074 27.0 10.7 97 131-238 116-221 (423)
92 3g8r_A Probable spore coat pol 38.6 2.1E+02 0.0072 26.5 10.3 85 122-237 75-159 (350)
93 1exn_A 5'-exonuclease, 5'-nucl 38.4 30 0.001 31.4 4.4 66 94-169 58-138 (290)
94 2qw5_A Xylose isomerase-like T 38.1 74 0.0025 27.9 6.9 69 119-187 103-183 (335)
95 1xim_A D-xylose isomerase; iso 36.9 53 0.0018 30.1 6.0 66 120-188 111-181 (393)
96 1xla_A D-xylose isomerase; iso 36.0 45 0.0015 30.6 5.3 65 119-186 110-179 (394)
97 1xho_A Chorismate mutase; sout 35.7 25 0.00085 29.1 3.1 33 217-249 38-71 (148)
98 4grd_A N5-CAIR mutase, phospho 34.7 1.9E+02 0.0066 24.3 8.5 69 97-196 14-84 (173)
99 2xd7_A Core histone macro-H2A. 34.5 1.1E+02 0.0038 25.5 7.2 46 125-170 116-162 (193)
100 3ors_A N5-carboxyaminoimidazol 34.4 2E+02 0.0068 24.0 8.5 68 97-195 5-74 (163)
101 1spv_A Putative polyprotein/ph 34.2 1E+02 0.0035 25.6 6.8 46 125-170 99-145 (184)
102 1xmp_A PURE, phosphoribosylami 33.4 2.1E+02 0.0072 24.0 8.5 68 97-195 13-82 (170)
103 2x7v_A Probable endonuclease 4 33.1 1.3E+02 0.0044 25.2 7.5 62 120-188 84-145 (287)
104 3aam_A Endonuclease IV, endoiv 32.9 1.2E+02 0.0041 25.4 7.2 58 119-188 82-140 (270)
105 2wqp_A Polysialic acid capsule 32.6 1.7E+02 0.0058 27.1 8.6 85 122-237 88-172 (349)
106 3tva_A Xylose isomerase domain 31.9 1.8E+02 0.0063 24.4 8.3 38 107-144 28-70 (290)
107 3g13_A Putative conjugative tr 31.8 68 0.0023 25.6 5.2 77 122-211 23-105 (169)
108 4b4k_A N5-carboxyaminoimidazol 31.6 2.3E+02 0.0079 24.0 8.5 67 98-195 25-93 (181)
109 3fbu_A Acetyltransferase, GNAT 31.3 79 0.0027 23.4 5.3 32 118-149 95-127 (168)
110 1u11_A PURE (N5-carboxyaminoim 30.4 2.5E+02 0.0086 23.8 8.6 68 97-195 23-92 (182)
111 3hst_B Protein RV2228C/MT2287; 30.4 1.7E+02 0.0059 21.9 7.3 29 120-148 47-75 (141)
112 2j8m_A Acetyltransferase PA486 30.3 65 0.0022 24.5 4.6 33 117-149 94-126 (172)
113 3bvp_A INT, TP901-1 integrase; 30.2 83 0.0029 24.3 5.3 67 125-204 25-94 (138)
114 1r4g_A RNA polymerase alpha su 29.9 39 0.0013 23.0 2.7 18 154-171 32-49 (53)
115 2d73_A Alpha-glucosidase SUSB; 29.0 78 0.0027 32.5 6.1 99 108-218 379-506 (738)
116 1dbf_A Protein (chorismate mut 28.9 30 0.001 27.9 2.4 32 218-249 10-42 (127)
117 2vzy_A RV0802C; transferase, G 28.9 94 0.0032 24.6 5.6 33 118-151 118-151 (218)
118 2ge3_A Probable acetyltransfer 28.8 50 0.0017 25.0 3.7 33 118-151 98-130 (170)
119 3lmz_A Putative sugar isomeras 28.7 60 0.002 27.2 4.5 24 122-145 86-109 (257)
120 2r7h_A Putative D-alanine N-ac 28.4 1.3E+02 0.0045 22.3 6.1 33 116-148 105-137 (177)
121 1o4v_A Phosphoribosylaminoimid 28.4 2.7E+02 0.0091 23.6 8.4 68 97-195 15-84 (183)
122 3trh_A Phosphoribosylaminoimid 28.2 2.6E+02 0.0091 23.4 8.9 68 97-195 8-77 (169)
123 1muw_A Xylose isomerase; atomi 28.0 74 0.0025 28.9 5.3 64 120-186 111-179 (386)
124 3eo4_A Uncharacterized protein 27.9 78 0.0027 23.6 4.7 33 117-149 102-134 (164)
125 3f8k_A Protein acetyltransfera 27.8 91 0.0031 22.9 5.0 30 119-148 87-116 (160)
126 1qtw_A Endonuclease IV; DNA re 27.3 2.1E+02 0.0072 23.8 7.8 63 119-188 83-146 (285)
127 2bei_A Diamine acetyltransfera 27.2 62 0.0021 24.9 4.0 32 118-149 101-132 (170)
128 3igr_A Ribosomal-protein-S5-al 26.9 95 0.0033 23.3 5.1 32 118-149 108-140 (184)
129 2ae6_A Acetyltransferase, GNAT 26.0 62 0.0021 24.6 3.8 32 118-149 94-125 (166)
130 1vhs_A Similar to phosphinothr 25.9 74 0.0025 24.5 4.3 33 118-151 94-126 (175)
131 2i79_A Acetyltransferase, GNAT 25.9 1.1E+02 0.0036 23.2 5.2 33 118-151 99-132 (172)
132 3h7i_A Ribonuclease H, RNAse H 25.8 1.3E+02 0.0045 27.5 6.4 82 93-192 61-158 (305)
133 4e0a_A BH1408 protein; structu 25.7 75 0.0026 23.1 4.2 31 118-148 101-131 (164)
134 3oqi_A YVMC, putative uncharac 25.7 1.2E+02 0.0042 27.1 6.1 115 123-257 44-177 (257)
135 1ufy_A Chorismate mutase; shik 25.5 40 0.0014 27.0 2.5 32 218-249 9-42 (122)
136 2x47_A Macro domain-containing 25.3 1.7E+02 0.0058 25.4 6.9 47 125-171 155-202 (235)
137 2g0w_A LMO2234 protein; putati 25.1 3.2E+02 0.011 23.2 8.7 76 127-208 70-146 (296)
138 3owc_A Probable acetyltransfer 25.0 1.2E+02 0.004 22.8 5.3 32 118-149 106-138 (188)
139 1is8_A GTP cyclohydrolase I; e 24.8 42 0.0014 29.7 2.8 26 96-136 132-157 (230)
140 1wur_A GTP cyclohydrolase I; b 24.7 41 0.0014 29.5 2.7 26 96-136 119-144 (220)
141 1s7k_A Acetyl transferase; GNA 24.6 1.3E+02 0.0046 22.2 5.5 31 118-148 108-139 (182)
142 2dx6_A Hypothetical protein TT 24.6 1.2E+02 0.004 24.4 5.3 41 124-164 90-130 (159)
143 1qsm_A HPA2 histone acetyltran 24.5 1.3E+02 0.0043 21.5 5.2 33 118-151 96-128 (152)
144 1muw_A Xylose isomerase; atomi 24.4 2.6E+02 0.009 25.2 8.4 29 127-155 35-63 (386)
145 3r9f_A MCCE protein; microcin 24.3 1.2E+02 0.004 23.1 5.2 34 117-151 115-149 (188)
146 1bo4_A Protein (serratia marce 23.9 83 0.0028 23.2 4.1 33 116-148 116-148 (168)
147 3pdi_A Nitrogenase MOFE cofact 23.7 4.7E+02 0.016 24.7 11.3 152 101-273 235-407 (483)
148 3jvn_A Acetyltransferase; alph 23.6 74 0.0025 23.5 3.8 33 117-149 100-132 (166)
149 1yr0_A AGR_C_1654P, phosphinot 23.2 99 0.0034 23.5 4.5 32 117-148 95-126 (175)
150 3tth_A Spermidine N1-acetyltra 22.8 1.8E+02 0.0061 21.4 5.9 34 117-151 95-129 (170)
151 3tcv_A GCN5-related N-acetyltr 22.8 1.7E+02 0.0057 24.4 6.2 36 115-151 136-172 (246)
152 1ydn_A Hydroxymethylglutaryl-C 22.8 99 0.0034 27.2 5.0 22 124-145 154-175 (295)
153 3lod_A Putative acyl-COA N-acy 22.6 1.1E+02 0.0036 22.5 4.5 33 117-149 86-118 (162)
154 2dxq_A AGR_C_4057P, acetyltran 22.4 88 0.003 23.3 4.0 33 116-148 92-124 (150)
155 2h7b_A Core-binding factor, ML 22.3 67 0.0023 25.1 3.2 40 226-270 25-64 (105)
156 1yre_A Hypothetical protein PA 22.2 1.6E+02 0.0055 22.5 5.7 33 118-151 109-142 (197)
157 1yd9_A Core histone macro-H2A. 22.2 1.3E+02 0.0045 25.1 5.4 40 125-164 113-152 (193)
158 3v32_B Ribonuclease ZC3H12A; r 22.2 66 0.0023 27.3 3.5 47 93-147 22-69 (185)
159 2cw6_A Hydroxymethylglutaryl-C 22.1 1.7E+02 0.0059 25.7 6.5 43 123-168 154-196 (298)
160 1xla_A D-xylose isomerase; iso 22.0 4.4E+02 0.015 23.8 9.7 22 127-148 35-56 (394)
161 1mio_A Nitrogenase molybdenum 22.0 2E+02 0.0069 27.9 7.4 47 98-145 236-284 (533)
162 1tiq_A Protease synthase and s 21.9 92 0.0032 24.1 4.2 32 118-149 103-134 (180)
163 1s3z_A Aminoglycoside 6'-N-ace 21.9 87 0.003 23.3 3.9 31 118-148 108-138 (165)
164 3g8w_A Lactococcal prophage PS 21.6 1.1E+02 0.0039 22.6 4.5 32 118-149 94-125 (169)
165 3t7v_A Methylornithine synthas 21.5 71 0.0024 28.5 3.8 17 124-140 187-203 (350)
166 2jvf_A De novo protein M7; tet 21.4 2.5E+02 0.0084 20.6 7.8 56 125-189 33-88 (96)
167 3gpg_A NSP3, non-structural pr 21.4 1.2E+02 0.0042 25.0 4.9 38 125-162 95-132 (168)
168 3fix_A N-acetyltransferase; te 21.2 94 0.0032 23.7 4.0 34 116-149 121-154 (183)
169 2fsr_A Acetyltransferase; alph 21.1 1.7E+02 0.0057 22.9 5.6 35 116-151 122-157 (195)
170 3aal_A Probable endonuclease 4 21.1 1.8E+02 0.0062 24.8 6.3 62 119-187 88-149 (303)
171 3q6z_A Poly [ADP-ribose] polym 21.1 1.4E+02 0.0047 25.6 5.3 46 125-170 134-180 (214)
172 2fe7_A Probable N-acetyltransf 21.0 1.1E+02 0.0036 22.4 4.2 32 118-149 101-132 (166)
173 2fck_A Ribosomal-protein-serin 21.0 1E+02 0.0035 23.0 4.1 30 119-148 111-141 (181)
174 3u7q_B Nitrogenase molybdenum- 20.8 5.7E+02 0.019 24.6 14.3 81 180-274 363-445 (523)
175 2oh1_A Acetyltransferase, GNAT 20.8 99 0.0034 23.1 4.0 31 118-148 116-146 (179)
176 1vhu_A Hypothetical protein AF 20.6 1.3E+02 0.0043 25.6 5.0 39 125-163 127-165 (211)
177 2jlm_A Putative phosphinothric 20.6 1.2E+02 0.0042 23.4 4.7 34 117-151 102-135 (182)
178 1wn9_A The hypothetical protei 20.5 1.2E+02 0.0041 24.4 4.4 65 83-149 15-96 (131)
179 2pdo_A Acetyltransferase YPEA; 20.4 1.1E+02 0.0038 22.4 4.2 32 118-149 82-113 (144)
180 3d8p_A Acetyltransferase of GN 20.3 1.1E+02 0.0036 22.3 4.0 31 118-148 91-121 (163)
181 3qb8_A A654L protein; GNAT N-a 20.2 1.2E+02 0.004 23.2 4.4 28 119-146 121-148 (197)
182 4h89_A GCN5-related N-acetyltr 20.2 1.3E+02 0.0044 23.1 4.7 34 118-151 101-134 (173)
183 2cy2_A TTHA1209, probable acet 20.2 1.1E+02 0.0038 22.3 4.1 32 118-149 101-132 (174)
184 2p6v_A Transcription initiatio 20.1 76 0.0026 25.1 3.1 44 222-270 36-79 (114)
185 2qgq_A Protein TM_1862; alpha- 20.1 3E+02 0.01 24.0 7.6 28 122-149 168-195 (304)
186 2b5g_A Diamine acetyltransfera 20.1 95 0.0033 23.0 3.8 32 118-149 101-132 (171)
187 1nsl_A Probable acetyltransfer 20.1 1.7E+02 0.0058 21.7 5.3 33 117-149 105-138 (184)
No 1
>4h8e_A Undecaprenyl pyrophosphate synthase; alpha-helix, prenyl transferase, cell WALL biosynthesis, FAR diphosphate binding; HET: FPP; 1.30A {Staphylococcus aureus subsp}
Probab=100.00 E-value=2.3e-68 Score=485.23 Aligned_cols=189 Identities=37% Similarity=0.646 Sum_probs=182.7
Q ss_pred HHHhccCCCCCCEEEEEecCCchHHHHcCCCCCcchhhhHHHHHHHHHHHHHcCCCeEEEEeeecCCCCCCHHHHHHHHH
Q 044091 85 LAEELQRESMPRHVAVIMDGNRRWAHLRGLPVGSGYEAGVKSLKTLVELCCKWGIRVLTVFAFSSDNWFRPEVEVEFLMS 164 (275)
Q Consensus 85 l~~~l~~~~iPrHIAiImDGNRRwAk~~gl~~~~Gh~~G~~~l~eiv~wc~~~GI~~lTvYaFSteN~kRp~~EV~~Lm~ 164 (275)
+..+++.+++|+||||||||||||||++|+++.+||++|++++.++++||.++||++|||||||+|||+||++||++||+
T Consensus 15 ~~~~~~~~~iP~HVAiIMDGN~RwAk~rgl~r~~GH~~G~~~~~~iv~~c~~lGI~~lTlYaFStENwkRp~~EV~~Lm~ 94 (256)
T 4h8e_A 15 YNEELDSSNIPEHIAIIMDGNGRWAKKRKMPRIKGHYEGMQTIKKITRIASDIGVKYLTLYAFSTENWSRPESEVNYIMN 94 (256)
T ss_dssp ----CCTTCCCSEEEEECCCHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHTCSEEEEEEEETTGGGSCHHHHHHHHH
T ss_pred hHHhccCCCCCCEEEEEcCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEEEchhhhCCCHHHHHHHHH
Confidence 34568889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhHHHHHHHhhcCCcEEEEecCCCCCCHHHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHHHhcCCC
Q 044091 165 LLESGVKEEKESFIRERIRISVIGDTSKLPKCLEELVINVVETTKNNTRFQLIVAVSYSGQYDLVQACQRIAMKVKDGLI 244 (275)
Q Consensus 165 l~~~~l~~~~~~~~~~~irvr~iGd~~~LP~~l~~~i~~~e~~T~~~~~~~lniai~YgGR~EIv~A~r~l~~~v~~g~l 244 (275)
|+.++|.+..+.+.++|||||++||++.||+++++.++++|+.|++|++++||||++||||+||++|+|+++++|++|.+
T Consensus 95 L~~~~l~~~~~~l~~~~vrvr~iGd~~~Lp~~~~~~i~~ae~~T~~n~~~~lnia~~YggR~EI~~Avr~i~~~v~~g~l 174 (256)
T 4h8e_A 95 LPVNFLKTFLPELIEKNVKVETIGFTDKLPKSTIEAINNAKEKTANNTGLKLIFAINYGGRAELVHSIKNMFDELHQQGL 174 (256)
T ss_dssp HHHHHHHHHHHHHHHTTCEEEEESCGGGSCHHHHHHHHHHHHHTTTCCSCEEEEEEEECHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHcCeEEEEecCcccCCHHHHHHHHHHHHHhcCCCCeEEEEEeCCCCHHHHHHHHHHHHHHHHcCCC
Confidence 99999999888999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCHHHHHhhhhcCCCCCCCCcEEEecC
Q 044091 245 EPNDVSESLIEQELETNCTEFPYPDLLIRTS 275 (275)
Q Consensus 245 ~~edI~e~~i~~~L~t~~~~~PdPDLLIRTs 275 (275)
+++||||+.|+++||++ ++||||||||||
T Consensus 175 ~~~~I~e~~i~~~L~t~--~~PdpDLlIRTs 203 (256)
T 4h8e_A 175 NSDIIDETYINNHLMTK--DYPDPELLIRTS 203 (256)
T ss_dssp CGGGCCHHHHHTTSTTT--TSCCCSEEEECS
T ss_pred ChhhCCHHHHHHhCCCC--CCCCCcEEEEcC
Confidence 99999999999999998 999999999998
No 2
>3sgv_B Undecaprenyl pyrophosphate synthase; alpha/beta, transferase; HET: 2BJ; 1.61A {Escherichia coli} PDB: 1jp3_A* 1v7u_A* 1x06_A* 1x07_A* 2e98_A* 2e99_A* 2e9a_A* 2e9c_A* 2e9d_A* 1ueh_A 3sgt_B* 3qas_B* 3sgx_A* 3sh0_B* 3th8_A* 4h2j_A* 4h2m_A* 4h2o_B* 4h38_A* 4h3a_A* ...
Probab=100.00 E-value=5.8e-68 Score=481.91 Aligned_cols=184 Identities=38% Similarity=0.613 Sum_probs=169.7
Q ss_pred cCCCCCCEEEEEecCCchHHHHcCCCCCcchhhhHHHHHHHHHHHHHcCCCeEEEEeeecCCCCCCHHHHHHHHHHHHHh
Q 044091 90 QRESMPRHVAVIMDGNRRWAHLRGLPVGSGYEAGVKSLKTLVELCCKWGIRVLTVFAFSSDNWFRPEVEVEFLMSLLESG 169 (275)
Q Consensus 90 ~~~~iPrHIAiImDGNRRwAk~~gl~~~~Gh~~G~~~l~eiv~wc~~~GI~~lTvYaFSteN~kRp~~EV~~Lm~l~~~~ 169 (275)
.+.++|+||||||||||||||++|+++.+||++|++++.++++||.++||++|||||||+||||||++||++||+|+.++
T Consensus 13 ~~~~iP~HVAiIMDGNrRwAk~rgl~r~~GH~~G~~~l~~i~~~c~~lGI~~lTlYaFStENwkRp~~EV~~Lm~L~~~~ 92 (253)
T 3sgv_B 13 LPAHGCRHVAIIMDGNGRWAKKQGKIRAFGHKAGAKSVRRAVSFAANNGIEALTLYAFSSENWNRPAQEVSALMELFVWA 92 (253)
T ss_dssp CCTTCCSEEEEEECCHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECC-----------CHHHHHHHHTT
T ss_pred cCCCCCCEEEEEecCcHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEEEchhccCCCHHHHHHHHHHHHHH
Confidence 45789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcCCcEEEEecCCCCCCHHHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCCCCC
Q 044091 170 VKEEKESFIRERIRISVIGDTSKLPKCLEELVINVVETTKNNTRFQLIVAVSYSGQYDLVQACQRIAMKVKDGLIEPNDV 249 (275)
Q Consensus 170 l~~~~~~~~~~~irvr~iGd~~~LP~~l~~~i~~~e~~T~~~~~~~lniai~YgGR~EIv~A~r~l~~~v~~g~l~~edI 249 (275)
|.++.+.++++|||||++||++.||+++++.++++|+.|++|++++||||++||||+||++|+|+++++|++|.+++++|
T Consensus 93 l~~~~~~l~~~~vrvr~iGd~~~Lp~~l~~~i~~ae~~T~~n~~~~lnia~~YggR~EI~~Avr~ia~~v~~g~l~~~~I 172 (253)
T 3sgv_B 93 LDSEVKSLHRHNVRLRIIGDTSRFNSRLQERIRKSEALTAGNTGLTLNIAANYGGRWDIVQGVRQLAEKVQQGNLQPDQI 172 (253)
T ss_dssp HHHHHHHHHHTTCEEEEESCGGGSCHHHHHHHHHHHHHHTTCCSCEEEEESSCCHHHHHHHHHHHHHHHHHHTSSCGGGC
T ss_pred HHHHHHHHHHCCeEEEEEeehhhCCHHHHHHHHHHHHHhccCCCeEEEEEecCCCHHHHHHHHHHHHHHHHcCCCChhhC
Confidence 99988899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHhhhhcCCCCCCCCcEEEecC
Q 044091 250 SESLIEQELETNCTEFPYPDLLIRTS 275 (275)
Q Consensus 250 ~e~~i~~~L~t~~~~~PdPDLLIRTs 275 (275)
||+.|+++||++ ++||||||||||
T Consensus 173 ~e~~i~~~L~t~--~~PdpDLlIRTs 196 (253)
T 3sgv_B 173 DEEMLNQHVCMH--ELAPVDLVIRTG 196 (253)
T ss_dssp CHHHHHTTSTTT--TSCCCCEEEEES
T ss_pred CHHHHHHhhccc--CCCCCcEEEEec
Confidence 999999999998 999999999998
No 3
>3ugs_B Undecaprenyl pyrophosphate synthase; niaid, csgid, structural genomics, center for structural GEN infectious diseases; HET: FFT; 2.46A {Campylobacter jejuni} SCOP: c.101.1.0
Probab=100.00 E-value=4.9e-65 Score=455.86 Aligned_cols=173 Identities=34% Similarity=0.638 Sum_probs=154.1
Q ss_pred CCCCCEEEEEecCCchHHHHcCCCCCcchhhhHHHHHHHHHHHHHcCCCeEEEEeeecCCCCCCHHHHHHHHHHHHHhHH
Q 044091 92 ESMPRHVAVIMDGNRRWAHLRGLPVGSGYEAGVKSLKTLVELCCKWGIRVLTVFAFSSDNWFRPEVEVEFLMSLLESGVK 171 (275)
Q Consensus 92 ~~iPrHIAiImDGNRRwAk~~gl~~~~Gh~~G~~~l~eiv~wc~~~GI~~lTvYaFSteN~kRp~~EV~~Lm~l~~~~l~ 171 (275)
..+|+||||||||||||||++|+++.+||++|++++.++++||.++||++|||||||||||+||++||++||+|+.++|.
T Consensus 4 m~~P~HVAiIMDGNrRwAk~rgl~r~~GH~~G~~~~~~i~~~c~~lGI~~lTlYaFStENw~Rp~~EV~~Lm~L~~~~l~ 83 (225)
T 3ugs_B 4 MNELKHLAVVMDGNRRWARAKGFLAKLGYSQGVKTMQKLMEVCMEENISNLSLFAFSTENWKRPKDEIDFIFELLDRCLD 83 (225)
T ss_dssp CCCCCEEEEEECCCC--------------CHHHHHHHHHHHHHHHTTCCEEEEEEEESGGGGSCHHHHHHHHHHHHHHHH
T ss_pred CCCCCeEEEeccCcHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEEEcccccCCCHHHHHHHHHHHHHHHH
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcCCcEEEEecCCCCCCHHHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCCCCCCH
Q 044091 172 EEKESFIRERIRISVIGDTSKLPKCLEELVINVVETTKNNTRFQLIVAVSYSGQYDLVQACQRIAMKVKDGLIEPNDVSE 251 (275)
Q Consensus 172 ~~~~~~~~~~irvr~iGd~~~LP~~l~~~i~~~e~~T~~~~~~~lniai~YgGR~EIv~A~r~l~~~v~~g~l~~edI~e 251 (275)
++.+.++++|||||++||+++||+++++.++++|+.|++|++++||||++||||+||++|+|++ |++| ++|||
T Consensus 84 ~~~~~l~~~~vrvr~iGd~~~Lp~~~~~~i~~ae~~T~~n~~~~lnia~~YggR~EI~~A~~~i---v~~g----~~I~e 156 (225)
T 3ugs_B 84 EALEKFEKNNVRLRAIGDLSRLEDKVREKITLVEEKTKHCDALCVNLAISYGARDEIIRAAKRV---IEKK----LELNE 156 (225)
T ss_dssp HHHHHSTTTTEEEEEESCGGGSCHHHHHHHHHHHHHHTTCCSEEEEEEEEECHHHHHHHHHHHH---HHTT----CCCSH
T ss_pred HHHHHHHHCCcEEEEEeChHhCCHHHHHHHHHHHHHhcCCCCcEEEEeeCCCCHHHHHHHHHHH---HHhc----CcCCH
Confidence 9888999999999999999999999999999999999999999999999999999999999999 5566 89999
Q ss_pred HHHHhhhhcCCCCCCCCcEEEecC
Q 044091 252 SLIEQELETNCTEFPYPDLLIRTS 275 (275)
Q Consensus 252 ~~i~~~L~t~~~~~PdPDLLIRTs 275 (275)
+.|+++||++ ||||||||||
T Consensus 157 ~~i~~~L~t~----PdpDLlIRTs 176 (225)
T 3ugs_B 157 ENLTQNLDLP----LDVDLMLRVG 176 (225)
T ss_dssp HHHHHTSSSC----SCCSEEEEES
T ss_pred HHHHHhcCCC----CCCCEEEEeC
Confidence 9999999983 9999999998
No 4
>1f75_A Undecaprenyl pyrophosphate synthetase; parallel beta sheet, NEW fold for isoprenoid synthase, peptidoglycan synthesis, transferase; 2.20A {Micrococcus luteus} SCOP: c.101.1.1
Probab=100.00 E-value=2.2e-65 Score=465.26 Aligned_cols=185 Identities=34% Similarity=0.625 Sum_probs=169.1
Q ss_pred ccCCCCCCEEEEEecCCchHHHHcCCCCCcchhhhHHHHHHHHHHHHHcCCCeEEEEeeecCCCCCCHHHHHHHHHHHHH
Q 044091 89 LQRESMPRHVAVIMDGNRRWAHLRGLPVGSGYEAGVKSLKTLVELCCKWGIRVLTVFAFSSDNWFRPEVEVEFLMSLLES 168 (275)
Q Consensus 89 l~~~~iPrHIAiImDGNRRwAk~~gl~~~~Gh~~G~~~l~eiv~wc~~~GI~~lTvYaFSteN~kRp~~EV~~Lm~l~~~ 168 (275)
++.+++|+||||||||||||||++|+++.+||.+|++++.++++||.++||++|||||||+|||+||++||+.||+++.+
T Consensus 15 ~~~~~iP~HVAiImDGN~RwA~~~gl~~~~GH~~G~~~l~~iv~~c~~~GI~~lTlYaFSteNwkRp~~EV~~Lm~l~~~ 94 (249)
T 1f75_A 15 INAAQIPKHIAIIMDGNGRWAKQKKMPRIKGHYEGMQTVRKITRYASDLGVKYLTLYAFSTENWSRPKDEVNYLMKLPGD 94 (249)
T ss_dssp CCSTTSCSEEEEEECCHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEC------------CGGGTHHHH
T ss_pred cccCCCCCEEEEEecCCcHHHHHCCCChhhhHHHHHHHHHHHHHHHHHcCCCEEEEEEecccccCCCHHHHHHHHHHHHH
Confidence 55678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHhhcCCcEEEEecCCCCCCHHHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCCCC
Q 044091 169 GVKEEKESFIRERIRISVIGDTSKLPKCLEELVINVVETTKNNTRFQLIVAVSYSGQYDLVQACQRIAMKVKDGLIEPND 248 (275)
Q Consensus 169 ~l~~~~~~~~~~~irvr~iGd~~~LP~~l~~~i~~~e~~T~~~~~~~lniai~YgGR~EIv~A~r~l~~~v~~g~l~~ed 248 (275)
++.+..+.+.++||||+++||++.||+++++.++++++.|++|++++||||++||||+||++|+|+++++|++|.++++|
T Consensus 95 ~l~~~~~~l~~~~vr~~~iG~~~~lp~~~~~~i~~~~~~T~~n~~l~lnia~~YggR~eIv~A~r~l~~~v~~g~l~~~~ 174 (249)
T 1f75_A 95 FLNTFLPELIEKNVKVETIGFIDDLPDHTKKAVLEAKEKTKHNTGLTLVFALNYGGRKEIISAVQLIAERYKSGEISLDE 174 (249)
T ss_dssp HHHHHHHHHHHTTCEEEEESCGGGSCHHHHHHHHHHHHTTTTCCSCEEEEECSCCHHHHHHHHHHHHHHHHHTTSSCGGG
T ss_pred HHHHHHHHHHHcCeEEEEeCChhhCCHHHHHHHHHHHHhhcCCCceEEEEEecCCCHHHHHHHHHHHHHHHHcCCCChHh
Confidence 99988888999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHhhhhcCCCCCCCCcEEEecC
Q 044091 249 VSESLIEQELETNCTEFPYPDLLIRTS 275 (275)
Q Consensus 249 I~e~~i~~~L~t~~~~~PdPDLLIRTs 275 (275)
|||++|+++|++. ++||||||||||
T Consensus 175 I~e~~i~~~L~t~--~~PdpDLlIRTs 199 (249)
T 1f75_A 175 ISETHFNEYLFTA--NMPDPELLIRTS 199 (249)
T ss_dssp CSHHHHGGGSTTT--TSCCCSEEEECT
T ss_pred CCHHHHHHhhccC--CCCCCcEEEEcC
Confidence 9999999999998 899999999998
No 5
>2vg3_A Undecaprenyl pyrophosphate synthetase; transferase, cell WALL biogenesis/degradation, cell cycle, P transferase; HET: GPP; 1.8A {Mycobacterium tuberculosis} PDB: 2vg2_A* 2vg4_A
Probab=100.00 E-value=7.5e-65 Score=468.53 Aligned_cols=190 Identities=32% Similarity=0.549 Sum_probs=184.0
Q ss_pred HHHHhccCCCCCCEEEEEecCCchHHHHcCCCCCcchhhhHHHHHHHHHHHHHcCCCeEEEEeeecCCCCCCHHHHHHHH
Q 044091 84 ALAEELQRESMPRHVAVIMDGNRRWAHLRGLPVGSGYEAGVKSLKTLVELCCKWGIRVLTVFAFSSDNWFRPEVEVEFLM 163 (275)
Q Consensus 84 ~l~~~l~~~~iPrHIAiImDGNRRwAk~~gl~~~~Gh~~G~~~l~eiv~wc~~~GI~~lTvYaFSteN~kRp~~EV~~Lm 163 (275)
.+...++.+++|+||||||||||||||++|+++.+||++|++++.++++||.++||++||||+||+||||||++||+.||
T Consensus 45 ~~~~~~~~~~iP~HVAIIMDGN~RwAk~rgl~r~~GH~~G~~~l~~iv~~c~~lGI~~LTlYaFStENwkRp~~EV~~Lm 124 (284)
T 2vg3_A 45 AAAPRIPADRLPNHVAIVMDGNGRWATQRGLARTEGHKMGEAVVIDIACGAIELGIKWLSLYAFSTENWKRSPEEVRFLM 124 (284)
T ss_dssp CCCCCCCTTTSCSEEEEECCCHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEETTGGGSCHHHHHHHH
T ss_pred hhhhhcccCCCCCEEEEEecCChHHHHHcCCchhHHHHHHHHHHHHHHHHHHHcCCCEEEEEeccCcccCCCHHHHHHHH
Confidence 34455667789999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhHHHHHHHhhcCCcEEEEecCCCCCCHHHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHHHhcCC
Q 044091 164 SLLESGVKEEKESFIRERIRISVIGDTSKLPKCLEELVINVVETTKNNTRFQLIVAVSYSGQYDLVQACQRIAMKVKDGL 243 (275)
Q Consensus 164 ~l~~~~l~~~~~~~~~~~irvr~iGd~~~LP~~l~~~i~~~e~~T~~~~~~~lniai~YgGR~EIv~A~r~l~~~v~~g~ 243 (275)
+++.++|.++.+.+.+++||||++||++.||+++++.++++++.|++|++++||||++||||+||++|+|+++++|++|.
T Consensus 125 ~L~~~~l~~~~~~l~~~~vrvrviG~~~~lp~~~~~~i~~ae~~T~~n~~l~Lnia~~YgGR~EIv~A~r~la~~v~~g~ 204 (284)
T 2vg3_A 125 GFNRDVVRRRRDTLKKLGVRIRWVGSRPRLWRSVINELAVAEEMTKSNDVITINYCVNYGGRTEITEATREIAREVAAGR 204 (284)
T ss_dssp HHHHHHHHHHHHHHHHTTEEEEEESCCTTSCHHHHHHHHHHHHHHTTCCSEEEEEEEEECHHHHHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHHHHcCeEEEEeCChhhCCHHHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHHHHcCC
Confidence 99999999888889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCHHHHHhhhhcCCCCCCCCcEEEecC
Q 044091 244 IEPNDVSESLIEQELETNCTEFPYPDLLIRTS 275 (275)
Q Consensus 244 l~~edI~e~~i~~~L~t~~~~~PdPDLLIRTs 275 (275)
++++||||++|+++|++. ++||||||||||
T Consensus 205 l~~~dI~e~~i~~~L~t~--~~PdPDLlIRTs 234 (284)
T 2vg3_A 205 LNPERITESTIARHLQRP--DIPDVDLFLRTS 234 (284)
T ss_dssp SCGGGCCHHHHHHHSSST--TCCCCSEEEECT
T ss_pred CChHHCCHHHHHHHhccC--CCCCCcEEEeCC
Confidence 999999999999999998 999999999998
No 6
>3qas_B Undecaprenyl pyrophosphate synthase; alpha-helix, isoprenoid biosynthesis, transferase; 1.70A {Escherichia coli} PDB: 1jp3_A* 1v7u_A* 1x06_A* 1x07_A* 2e98_A* 2e99_A* 2e9a_A* 2e9c_A* 2e9d_A* 1ueh_A 1x09_A* 1x08_A*
Probab=100.00 E-value=1.3e-64 Score=460.86 Aligned_cols=187 Identities=39% Similarity=0.640 Sum_probs=160.7
Q ss_pred HhccCCCCC----CEEEEEecCCchHHHHcCCCCCcchhhhHHHHHHHHHHHHHcCCCeEEEEeeecCCCCCCHHHHHHH
Q 044091 87 EELQRESMP----RHVAVIMDGNRRWAHLRGLPVGSGYEAGVKSLKTLVELCCKWGIRVLTVFAFSSDNWFRPEVEVEFL 162 (275)
Q Consensus 87 ~~l~~~~iP----rHIAiImDGNRRwAk~~gl~~~~Gh~~G~~~l~eiv~wc~~~GI~~lTvYaFSteN~kRp~~EV~~L 162 (275)
..++.+++| +||||||||||||||++|+++.+||.+|++++.++++||.++||++|||||||+||||||++||+.|
T Consensus 6 ~~l~~~~iP~~~~~HVAiImDGN~RwAk~~gl~r~~GH~~G~~~l~~iv~~c~~~GI~~lTlYaFStENwkRp~~EV~~L 85 (253)
T 3qas_B 6 TQPLSEKLPAHGCRHVAIIMDGNGRWAKKQGKIRAFGHKAGAKSVRRAVSFAANNGIEALTLYAFSSENWNRPAQEVSAL 85 (253)
T ss_dssp -------CCTTCCSEEEEECCCHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCCC-------------
T ss_pred cccccCCCCCCCCCEEEEEecCCHHHHHHcCCChhhhHHHHHHHHHHHHHHHHHCCCCEEEEEEecCcccCCCHHHHHHH
Confidence 345667899 9999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhHHHHHHHhhcCCcEEEEecCCCCCCHHHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHHHhcC
Q 044091 163 MSLLESGVKEEKESFIRERIRISVIGDTSKLPKCLEELVINVVETTKNNTRFQLIVAVSYSGQYDLVQACQRIAMKVKDG 242 (275)
Q Consensus 163 m~l~~~~l~~~~~~~~~~~irvr~iGd~~~LP~~l~~~i~~~e~~T~~~~~~~lniai~YgGR~EIv~A~r~l~~~v~~g 242 (275)
|+++.++|.+..+.+.+++||||++||++.||+++++.++++++.|++|++++||||++||||+||++|+|+++++|++|
T Consensus 86 m~l~~~~l~~~~~~l~~~~vrlr~iG~~~~lp~~~~~~i~~a~~~T~~n~~l~lnia~~YgGR~EIv~A~r~l~~~v~~g 165 (253)
T 3qas_B 86 MELFVWALDSEVKSLHRHNVRLRIIGDTSRFNSRLQERIRKSEALTAGNTGLTLNIAANYGGRWDIVQGVRQLAEKVQQG 165 (253)
T ss_dssp ----CTHHHHHHHHHHHTTCEEEEESCCTTSCHHHHHHHHHHHHHHTTCCSCEEEEESSCCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHCCeEEEEeCChHhCCHHHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHHHHcC
Confidence 99999999998888999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCHHHHHhhhhcCCCCCCCCcEEEecC
Q 044091 243 LIEPNDVSESLIEQELETNCTEFPYPDLLIRTS 275 (275)
Q Consensus 243 ~l~~edI~e~~i~~~L~t~~~~~PdPDLLIRTs 275 (275)
.++++||||+.|+++|++. ++||||||||||
T Consensus 166 ~l~~~~I~e~~i~~~L~t~--~~PdpDLlIRTs 196 (253)
T 3qas_B 166 NLQPDQIDEEMLNQHVCMH--ELAPVDLVIRTG 196 (253)
T ss_dssp SCCGGGCCHHHHHTTSTTT--TSCCCCEEEECS
T ss_pred CCChHHCCHHHHHHhhccC--CCCCCcEEEEcC
Confidence 9999999999999999998 899999999998
No 7
>2d2r_A Undecaprenyl pyrophosphate synthase; prenyltransferase, transferase; 1.88A {Helicobacter pylori} PDB: 2dtn_A
Probab=100.00 E-value=1e-64 Score=459.86 Aligned_cols=181 Identities=33% Similarity=0.607 Sum_probs=167.1
Q ss_pred CCCCCEEEEEecCCchHHHHcCCCCCcchhhhHHHHHHHHHHHHHcCCCeEEEEeeecCCCCCCHHHHHHHHHHHHHhHH
Q 044091 92 ESMPRHVAVIMDGNRRWAHLRGLPVGSGYEAGVKSLKTLVELCCKWGIRVLTVFAFSSDNWFRPEVEVEFLMSLLESGVK 171 (275)
Q Consensus 92 ~~iPrHIAiImDGNRRwAk~~gl~~~~Gh~~G~~~l~eiv~wc~~~GI~~lTvYaFSteN~kRp~~EV~~Lm~l~~~~l~ 171 (275)
+++|+||||||||||||||++|+++.+||.+|++++.++++||.++||++|||||||+||||||++||+.||+++.+++.
T Consensus 13 ~~iP~HVAiImDGN~RwAk~~gl~~~~GH~~G~~~l~~iv~~c~~~GI~~lTlYaFSteNwkRp~~EV~~Lm~l~~~~l~ 92 (245)
T 2d2r_A 13 DSTLKHLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENWKRPKSEVDFLMKMLKKYLK 92 (245)
T ss_dssp -CCCCEEEEECCCHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTTCSEEEEECC----------CHHHHHHHHHHHHH
T ss_pred CCCCCEEEEEecCchHHHHHCCCChhhhHHHHHHHHHHHHHHHHHcCCCEEEEEeccCcccCCCHHHHHHHHHHHHHHHH
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcCCcEEEEecCCCCCCHHHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCCCCCCH
Q 044091 172 EEKESFIRERIRISVIGDTSKLPKCLEELVINVVETTKNNTRFQLIVAVSYSGQYDLVQACQRIAMKVKDGLIEPNDVSE 251 (275)
Q Consensus 172 ~~~~~~~~~~irvr~iGd~~~LP~~l~~~i~~~e~~T~~~~~~~lniai~YgGR~EIv~A~r~l~~~v~~g~l~~edI~e 251 (275)
+..+.+.++||||+++||++.||+++++.+.++++.|++|++++||||++||||+||++|+|+++++|++ .++|+||||
T Consensus 93 ~~~~~l~~~~vrl~~iG~~~~lp~~~~~~i~~a~~~T~~n~~l~lnia~~YggR~EIv~A~r~i~~~v~~-~l~~~~I~e 171 (245)
T 2d2r_A 93 DERSTYLDNNIRFRAIGDLEGFSKELRDTILQLENDTRHFKDFTQVLALNYGSKNELSRAFKSLLESPPS-NISLLESLE 171 (245)
T ss_dssp HHHHHHHHTTCEEEEESCGGGSCHHHHHHHHHHHHHHTTCCSCEEEEECSCCHHHHHHHHHHHHHHSCCT-TGGGCSCCH
T ss_pred HHHHHHHHcCeEEEEecChhhCCHHHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHHHHh-cCChhhCCH
Confidence 9888899999999999999999999999999999999999999999999999999999999999999988 999999999
Q ss_pred HHHHhhhhcCCCCCCCCcEEEecC
Q 044091 252 SLIEQELETNCTEFPYPDLLIRTS 275 (275)
Q Consensus 252 ~~i~~~L~t~~~~~PdPDLLIRTs 275 (275)
+.|+++|++. ++||||||||||
T Consensus 172 ~~i~~~L~t~--~~PdpDLlIRTs 193 (245)
T 2d2r_A 172 NEISNRLDTR--NLPEVDLLLRTG 193 (245)
T ss_dssp HHHHTTSTTT--TSCCCSEEEECS
T ss_pred HHHHHHhccC--CCCCCcEEEEcC
Confidence 9999999998 999999999998
No 8
>2vg0_A Short-chain Z-isoprenyl diphosphate synthetase; peptidoglycan synthesis, cell WALL biogenesis/degradation, secreted, cell shape; HET: GPP; 1.7A {Mycobacterium tuberculosis} PDB: 2vfw_A* 2vg1_A*
Probab=100.00 E-value=5e-64 Score=451.00 Aligned_cols=179 Identities=31% Similarity=0.485 Sum_probs=174.2
Q ss_pred CCCCEEEEEecCCchHHHHcC-CCCCcchhhhHHHHHHHHHHHHHcCCCeEEEEeeecCCCCCCHHHHHHHHHHHHHhHH
Q 044091 93 SMPRHVAVIMDGNRRWAHLRG-LPVGSGYEAGVKSLKTLVELCCKWGIRVLTVFAFSSDNWFRPEVEVEFLMSLLESGVK 171 (275)
Q Consensus 93 ~iPrHIAiImDGNRRwAk~~g-l~~~~Gh~~G~~~l~eiv~wc~~~GI~~lTvYaFSteN~kRp~~EV~~Lm~l~~~~l~ 171 (275)
++|+||||||||||||||++| +++.+||.+|++++.++++||.++||++||||+||+||||||++||+.||+++.+++.
T Consensus 1 ~iP~HvAiImDGN~RwA~~~g~l~~~~GH~~G~~~l~~i~~~c~~~GI~~lTlYaFSteN~kRp~~Ev~~Lm~l~~~~l~ 80 (227)
T 2vg0_A 1 DLPRHIAVLCDGNRRWARSAGYDDVSYGYRMGAAKIAEMLRWCHEAGIELATVYLLSTENLQRDPDELAALIEIITDVVE 80 (227)
T ss_dssp CCCSEEEEECCCHHHHHHHTTCSCTHHHHHHHHHHHHHHHHHHHHHTCSEEEEEEEETGGGGSCHHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEEecCChHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHcCCCEEEEEeecccccCCCHHHHHHHHHHHHHHHH
Confidence 589999999999999999999 9999999999999999999999999999999999999999999999999999999998
Q ss_pred HHHHHhhcCCcEEEEecCCCCCCHHHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCCCC---
Q 044091 172 EEKESFIRERIRISVIGDTSKLPKCLEELVINVVETTKNNTRFQLIVAVSYSGQYDLVQACQRIAMKVKDGLIEPND--- 248 (275)
Q Consensus 172 ~~~~~~~~~~irvr~iGd~~~LP~~l~~~i~~~e~~T~~~~~~~lniai~YgGR~EIv~A~r~l~~~v~~g~l~~ed--- 248 (275)
+..+. +++|||+++||++.||+++++.++++++.|++|++++||||++||||+||++|+|+++++|++|.++++|
T Consensus 81 ~~~~~--~~~vrv~~iG~~~~lp~~~~~~i~~~~~~T~~n~~l~lnia~~YggR~eI~~A~r~l~~~v~~g~l~~~~~~~ 158 (227)
T 2vg0_A 81 EICAP--ANHWSVRTVGDLGLIGEEPARRLRGAVESTPEVASFHVNVAVGYGGRREIVDAVRALLSKELANGATAEELVD 158 (227)
T ss_dssp HHTCT--TTCCEEEEESCGGGSCHHHHHHHHHHHHTSCSSCSCEEEEEEEECHHHHHHHHHHHHHHHHHHTTCCHHHHHH
T ss_pred HHhcc--ccCeEEEecCChhhCCHHHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHHHHcCCCChhHhhc
Confidence 76543 7899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred -CCHHHHHhhhhcCCCCCCCCcEEEecC
Q 044091 249 -VSESLIEQELETNCTEFPYPDLLIRTS 275 (275)
Q Consensus 249 -I~e~~i~~~L~t~~~~~PdPDLLIRTs 275 (275)
|||+.|+++|++. ++||||||||||
T Consensus 159 ~I~e~~i~~~L~t~--~~pdpDLlIRTs 184 (227)
T 2vg0_A 159 AVTVEGISENLYTS--GQPDPDLVIRTS 184 (227)
T ss_dssp HCCHHHHHHHSTTT--TSCCCSEEEECT
T ss_pred cCCHHHHHHhhccC--CCCCCcEEEEcC
Confidence 9999999999997 999999999998
No 9
>2zds_A Putative DNA-binding protein; TIM-barrel fold, structural genomics, NPPSFA; 2.30A {Streptomyces coelicolor}
Probab=77.50 E-value=7.3 Score=34.23 Aligned_cols=68 Identities=15% Similarity=0.106 Sum_probs=46.4
Q ss_pred hhhHHHHHHHHHHHHHcCCCeEEEEeeecC-----CCC-CCHHHHHHHHHHHHHhHHHHHHHhhcCCcEEEEec
Q 044091 121 EAGVKSLKTLVELCCKWGIRVLTVFAFSSD-----NWF-RPEVEVEFLMSLLESGVKEEKESFIRERIRISVIG 188 (275)
Q Consensus 121 ~~G~~~l~eiv~wc~~~GI~~lTvYaFSte-----N~k-Rp~~EV~~Lm~l~~~~l~~~~~~~~~~~irvr~iG 188 (275)
.+.++.+.+.++.|.++|++.|.+..-+.. .|. |+....+.-++.+.+.|++..+...+.||++-+--
T Consensus 107 ~~~~~~~~~~i~~A~~lGa~~v~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lEn 180 (340)
T 2zds_A 107 QRAAAEIKDTARAAARLGVDTVIGFTGSAIWHLVAMFPPAPESMIERGYQDFADRWNPILDVFDAEGVRFAHEV 180 (340)
T ss_dssp HHHHHHHHHHHHHHHHHTCSEEEECCCCSSGGGTTCCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEC
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEEecCCcCcccccccCCCcccchHHHHHHHHHHHHHHHHHHHHcCCEEEEEc
Confidence 455788999999999999999998653321 121 44333344455666667666667777899987754
No 10
>3dx5_A Uncharacterized protein ASBF; beta-alpha barrel, petrobactin synthesis, ASB locus, structu genomics, PSI-2, protein structure initiative; HET: MSE DHB TRS; 2.12A {Bacillus anthracis}
Probab=76.15 E-value=11 Score=32.21 Aligned_cols=113 Identities=13% Similarity=0.135 Sum_probs=60.5
Q ss_pred hhhhHHHHHHHHHHHHHcCCCeEEEEeeecCCCCCCHHHHHHHHHHHHHhHHHHHHHhhcCCcEEEEecCCCCCCHHHHH
Q 044091 120 YEAGVKSLKTLVELCCKWGIRVLTVFAFSSDNWFRPEVEVEFLMSLLESGVKEEKESFIRERIRISVIGDTSKLPKCLEE 199 (275)
Q Consensus 120 h~~G~~~l~eiv~wc~~~GI~~lTvYaFSteN~kRp~~EV~~Lm~l~~~~l~~~~~~~~~~~irvr~iGd~~~LP~~l~~ 199 (275)
..+..+.+.+.++.|..+|++.|.++......-..+.+. ++.+.+.|+...+...+.||++-+--....+-.....
T Consensus 79 ~~~~~~~~~~~i~~A~~lG~~~v~~~~g~~~~~~~~~~~----~~~~~~~l~~l~~~a~~~Gv~l~lE~~~~~~~~~~~~ 154 (286)
T 3dx5_A 79 FEKTIEKCEQLAILANWFKTNKIRTFAGQKGSADFSQQE----RQEYVNRIRMICELFAQHNMYVLLETHPNTLTDTLPS 154 (286)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCEEEECSCSSCGGGSCHHH----HHHHHHHHHHHHHHHHHTTCEEEEECCTTSTTSSHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCCEEEEcCCCCCcccCcHHH----HHHHHHHHHHHHHHHHHhCCEEEEecCCCcCcCCHHH
Confidence 456688999999999999999999866432111112222 2444555555556677889998775432222112222
Q ss_pred HHHHHHHHh-cCCCceEEEEEecCCCHHHHHHHHHHHHH
Q 044091 200 LVINVVETT-KNNTRFQLIVAVSYSGQYDLVQACQRIAM 237 (275)
Q Consensus 200 ~i~~~e~~T-~~~~~~~lniai~YgGR~EIv~A~r~l~~ 237 (275)
+..+-+.+ ..+-++.+.++=.+-.-.++.++++.+..
T Consensus 155 -~~~l~~~~~~~~vg~~~D~~h~~~~g~d~~~~l~~~~~ 192 (286)
T 3dx5_A 155 -TLELLGEVDHPNLKINLDFLHIWESGADPVDSFQQLRP 192 (286)
T ss_dssp -HHHHHHHHCCTTEEEEEEHHHHHHTTCCHHHHHHHHGG
T ss_pred -HHHHHHhcCCCCeEEEeccccHhhcCCCHHHHHHHHHh
Confidence 22323332 23333333332222222356666666643
No 11
>3tc3_A UV damage endonuclease; TIM-barrel, hydrolase; 1.50A {Sulfolobus acidocaldarius}
Probab=74.63 E-value=16 Score=33.67 Aligned_cols=105 Identities=19% Similarity=0.220 Sum_probs=63.1
Q ss_pred hhHHHHHHHHHHHHHcCCCeEEEEeeecCCC---CCCHHHHHHHHHHHHHhHHHHHHHhhcCCcEEEEec-CCCCC----
Q 044091 122 AGVKSLKTLVELCCKWGIRVLTVFAFSSDNW---FRPEVEVEFLMSLLESGVKEEKESFIRERIRISVIG-DTSKL---- 193 (275)
Q Consensus 122 ~G~~~l~eiv~wc~~~GI~~lTvYaFSteN~---kRp~~EV~~Lm~l~~~~l~~~~~~~~~~~irvr~iG-d~~~L---- 193 (275)
.-++.+.++++||.+.||+ +|-+|.+-| ..|.-.. .+.+.+.+.|.+--+.+.++|+|+-+-- ....|
T Consensus 57 ~Nl~~l~~il~~n~~~~I~---~yRiSS~l~P~~thp~~~~-~~~~~~~~~l~~iG~~a~~~~iRLS~HPgqF~vL~S~~ 132 (310)
T 3tc3_A 57 SNLLCLKNILEWNLKHEIL---FFRISSNTIPLASHPKFHV-NWKDKLSHILGDIGDFIKENSIRISMHPGQYVVLNSVR 132 (310)
T ss_dssp HHHHHHHHHHHHHHHTTCC---EEECCTTSSTTTTSTTCCC-CHHHHTHHHHHHHHHHHHHTTCEEEECCCTTCCTTCSS
T ss_pred HHHHHHHHHHHHHHHcCCE---EEEeCcccCCCcccccccc-chHHHHHHHHHHHHHHHHHcCcEEEecCCCCccCCCCC
Confidence 5578899999999999996 678776442 1221110 1123344455554566788999998843 33333
Q ss_pred CHHHHHHHHHHHHHhc-----CC-CceEEEEEecCCCHHHHHH
Q 044091 194 PKCLEELVINVVETTK-----NN-TRFQLIVAVSYSGQYDLVQ 230 (275)
Q Consensus 194 P~~l~~~i~~~e~~T~-----~~-~~~~lniai~YgGR~EIv~ 230 (275)
|+-+.+.+++++-... +. ..+.+.++-.||+|++-++
T Consensus 133 ~~Vv~~SI~dL~yHa~~ld~mG~~~~i~IH~Gg~yGdK~~al~ 175 (310)
T 3tc3_A 133 EEVVRSSIMELKYHADLLDSMGIEGKIQIHVGSSMNGKEESLN 175 (310)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCCCEEEEECCCCTTCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCcCceeecCCcCCCHHHHHH
Confidence 3334556666544311 22 2466667778999976543
No 12
>1tz9_A Mannonate dehydratase; alpha-beta protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium; 2.90A {Enterococcus faecalis} SCOP: c.1.15.6
Probab=74.07 E-value=7.1 Score=35.61 Aligned_cols=35 Identities=14% Similarity=0.270 Sum_probs=26.3
Q ss_pred chhhhHHHHHHHHHHHHHcCCCeEEEEeee-cCCCCC
Q 044091 119 GYEAGVKSLKTLVELCCKWGIRVLTVFAFS-SDNWFR 154 (275)
Q Consensus 119 Gh~~G~~~l~eiv~wc~~~GI~~lTvYaFS-teN~kR 154 (275)
...+.++.+.++++.|.++|++.|.+ .|. ..+|.|
T Consensus 89 ~r~~~i~~~~~~i~~a~~lG~~~v~~-n~~p~~~w~~ 124 (367)
T 1tz9_A 89 QRDHYIDNYRQTLRNLGKCGISLVCY-SFKPIFGWAK 124 (367)
T ss_dssp THHHHHHHHHHHHHHHHHTTCCEEEE-CCCSSCSCCC
T ss_pred CHHHHHHHHHHHHHHHHHcCCCEEEE-eCCCcCCccC
Confidence 45667899999999999999999876 333 245543
No 13
>2hk0_A D-psicose 3-epimerase; TIM-barrel, isomerase; 2.00A {Agrobacterium tumefaciens} PDB: 2hk1_A*
Probab=73.62 E-value=7.4 Score=34.04 Aligned_cols=69 Identities=10% Similarity=-0.104 Sum_probs=43.2
Q ss_pred hhhhHHHHHHHHHHHHHcCCCeEEEEeeecCCCCCCHH-HHHHHHHHHHHhHHHHHHHhhcCCcEEEEec
Q 044091 120 YEAGVKSLKTLVELCCKWGIRVLTVFAFSSDNWFRPEV-EVEFLMSLLESGVKEEKESFIRERIRISVIG 188 (275)
Q Consensus 120 h~~G~~~l~eiv~wc~~~GI~~lTvYaFSteN~kRp~~-EV~~Lm~l~~~~l~~~~~~~~~~~irvr~iG 188 (275)
.....+.+.+.++.|.++|++.|.+..++......+.. ..+.-++.+.+.|++..+...+.||++-+--
T Consensus 102 r~~~~~~~~~~i~~A~~lG~~~v~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~lEn 171 (309)
T 2hk0_A 102 RAAGKAFFERTLSNVAKLDIHTIGGALHSYWPIDYSQPVDKAGDYARGVEGINGIADFANDLGINLCIEV 171 (309)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCEEEECTTSCSSCCTTSCCCHHHHHHHHHHHHHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEeeccccccccCCCcCChHHHHHHHHHHHHHHHHHHHHcCCEEEEee
Confidence 45667899999999999999999865432211110000 1122334455566666666778899987743
No 14
>3cny_A Inositol catabolism protein IOLE; xylose isomerase-like TIM barrel, structural genomics, joint for structural genomics, JCSG; 1.85A {Lactobacillus plantarum WCFS1}
Probab=73.52 E-value=18 Score=30.94 Aligned_cols=69 Identities=10% Similarity=0.015 Sum_probs=42.6
Q ss_pred hhhhHHHHHHHHHHHHHcCCCeEEEEee--ec-----CCCC-CCHHHHHHHHHHHHHhHHHHHHHhhcCCcEEEEec
Q 044091 120 YEAGVKSLKTLVELCCKWGIRVLTVFAF--SS-----DNWF-RPEVEVEFLMSLLESGVKEEKESFIRERIRISVIG 188 (275)
Q Consensus 120 h~~G~~~l~eiv~wc~~~GI~~lTvYaF--St-----eN~k-Rp~~EV~~Lm~l~~~~l~~~~~~~~~~~irvr~iG 188 (275)
.....+.+.+.++.|.++|++.|.+... +. +.|. |+...-+.-++.+.+.|++..+...++||++-+--
T Consensus 85 ~~~~~~~~~~~i~~a~~lG~~~v~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~lE~ 161 (301)
T 3cny_A 85 IEKASEAFEKHCQYLKAINAPVAVVSEQTYTIQRSDTANIFKDKPYFTDKEWDEVCKGLNHYGEIAAKYGLKVAYHH 161 (301)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCEEEEEECTTCCTTCSSCCTTTCCCCCCHHHHHHHHHHHHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEecCCCccccCcccCCcccccccCcHHHHHHHHHHHHHHHHHHHHcCCEEEEec
Confidence 3456788999999999999999988752 11 1121 11000112234445555555566778899987754
No 15
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=73.20 E-value=44 Score=29.96 Aligned_cols=106 Identities=17% Similarity=0.146 Sum_probs=73.8
Q ss_pred hhHHHHHHHHHHHHHcCCCeEEEEeeecCCCCCCHHHHHHHHHHHHHhHHHHHHHhhcCCcEEEE-ecCCCCCCHHHHHH
Q 044091 122 AGVKSLKTLVELCCKWGIRVLTVFAFSSDNWFRPEVEVEFLMSLLESGVKEEKESFIRERIRISV-IGDTSKLPKCLEEL 200 (275)
Q Consensus 122 ~G~~~l~eiv~wc~~~GI~~lTvYaFSteN~kRp~~EV~~Lm~l~~~~l~~~~~~~~~~~irvr~-iGd~~~LP~~l~~~ 200 (275)
--.+.+.++++|..+.||.-|.+..-+.|.+.=+.+|...+++...+... ..+.|-+ +|..+ +.+.
T Consensus 29 iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~--------grvpViaGvg~~~-----t~~a 95 (303)
T 2wkj_A 29 LDKASLRRLVQFNIQQGIDGLYVGGSTGEAFVQSLSEREQVLEIVAEEAK--------GKIKLIAHVGCVS-----TAES 95 (303)
T ss_dssp BCHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHT--------TTSEEEEECCCSS-----HHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECeeccChhhCCHHHHHHHHHHHHHHhC--------CCCcEEEecCCCC-----HHHH
Confidence 34788999999999999999999888889999999999998887766442 2344322 33332 3444
Q ss_pred HHHHHHHhcCCCceEEEEEecC--CCHHHHHHHHHHHHHHHh
Q 044091 201 VINVVETTKNNTRFQLIVAVSY--SGQYDLVQACQRIAMKVK 240 (275)
Q Consensus 201 i~~~e~~T~~~~~~~lniai~Y--gGR~EIv~A~r~l~~~v~ 240 (275)
++.+....+-.-+..+-+.=.| .+.++|++-.+.+++.+.
T Consensus 96 i~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~ 137 (303)
T 2wkj_A 96 QQLAASAKRYGFDAVSAVTPFYYPFSFEEHCDHYRAIIDSAD 137 (303)
T ss_dssp HHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHhCCCCEEEecCCCCCCCCHHHHHHHHHHHHHhCC
Confidence 4444433333445555555555 488999999999998764
No 16
>3bdk_A D-mannonate dehydratase; xylose isomerase-like TIM barrel, lyase; HET: DNO; 2.50A {Streptococcus suis} PDB: 3ban_A* 3dbn_A* 3fvm_A
Probab=71.54 E-value=14 Score=34.79 Aligned_cols=117 Identities=18% Similarity=0.211 Sum_probs=73.2
Q ss_pred cchhhhHHHHHHHHHHHHHcCCCeEEEEeeec-CCCCCC----------------------------------------H
Q 044091 118 SGYEAGVKSLKTLVELCCKWGIRVLTVFAFSS-DNWFRP----------------------------------------E 156 (275)
Q Consensus 118 ~Gh~~G~~~l~eiv~wc~~~GI~~lTvYaFSt-eN~kRp----------------------------------------~ 156 (275)
....+.++.+++.++.+.++||+.|. |.|+. -.|.|. .
T Consensus 97 ~~r~~~ie~~k~~i~~aa~lGi~~v~-~nf~p~~~w~rt~~~~~~~~G~~~~~f~~~~~~~~d~~~~~~~~pg~~~~~~~ 175 (386)
T 3bdk_A 97 PNRDALIENYKTSIRNVGAAGIPVVC-YNFMPVFDWTRSDLHHPLPDGSTSLAFLKSDLAGVDPVADDLNLPGWDSSYSK 175 (386)
T ss_dssp TTHHHHHHHHHHHHHHHHTTTCCEEE-ECCCSSCSCCCSEEEEECTTSCEEEEEEGGGGSSCCC--------------CC
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCEEE-EcCcccccccccccccccCCCccccccchhhhhcccchhhccCCCCccccccH
Confidence 34678899999999999999999884 45552 123221 0
Q ss_pred H-------------HHHHHHHHHHHhHHHHHHHhhcCCcEEEEecCCCC-----CCH--HHHHHHHHHHHHhcCCCceEE
Q 044091 157 V-------------EVEFLMSLLESGVKEEKESFIRERIRISVIGDTSK-----LPK--CLEELVINVVETTKNNTRFQL 216 (275)
Q Consensus 157 ~-------------EV~~Lm~l~~~~l~~~~~~~~~~~irvr~iGd~~~-----LP~--~l~~~i~~~e~~T~~~~~~~l 216 (275)
+ .-+.+.+.+.++|++..+...+.||++-+--+-.. +|. ...+.+..+.+.+. ...+.|
T Consensus 176 ~~~~~~~~~y~~~~~~e~~w~~l~~~L~~i~~~Aee~GV~Laiep~dpp~~~~Gl~riv~t~e~~~rll~~vd-sp~~gl 254 (386)
T 3bdk_A 176 EEMKAIIENYRQNISEEDLWANLEYFIKAILPTAEEAGVKMAIHPDDPPYGIFGLPRIITGQEAVERFLNLYD-SEHNGI 254 (386)
T ss_dssp HHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHSSSCEEEECCCSSSSCCTTCCCCCCSHHHHHHHHHTTC-STTEEE
T ss_pred HHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHHhCCEEEEeeCCcccccccCCceeCCHHHHHHHHHhcC-CCCEEE
Confidence 0 12456667777788777888888999988654211 111 01233333343332 344677
Q ss_pred EEEec---CCCHHHHHHHHHHHH
Q 044091 217 IVAVS---YSGQYDLVQACQRIA 236 (275)
Q Consensus 217 niai~---YgGR~EIv~A~r~l~ 236 (275)
++|.+ +....++++++++..
T Consensus 255 ~lDtG~l~~~~~~D~~~~i~~~~ 277 (386)
T 3bdk_A 255 TMCVGSYASDPKNDVLAMTEYAL 277 (386)
T ss_dssp EEEHHHHHTSTTCCHHHHHHHHH
T ss_pred EEccCchhhcCCCCHHHHHHHhC
Confidence 77753 333577888888876
No 17
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=70.28 E-value=42 Score=30.19 Aligned_cols=106 Identities=12% Similarity=0.103 Sum_probs=74.6
Q ss_pred hhHHHHHHHHHHHHHcCCCeEEEEeeecCCCCCCHHHHHHHHHHHHHhHHHHHHHhhcCCcEEEEecCCCCCCHHHHHHH
Q 044091 122 AGVKSLKTLVELCCKWGIRVLTVFAFSSDNWFRPEVEVEFLMSLLESGVKEEKESFIRERIRISVIGDTSKLPKCLEELV 201 (275)
Q Consensus 122 ~G~~~l~eiv~wc~~~GI~~lTvYaFSteN~kRp~~EV~~Lm~l~~~~l~~~~~~~~~~~irvr~iGd~~~LP~~l~~~i 201 (275)
--.+.+.++++|..+.||.-+.+..-+.|.+.=+.+|...+++...+... ..+.| +.|--+. .+.+.+
T Consensus 32 iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~--------gr~pv-iaGvg~~---~t~~ai 99 (307)
T 3s5o_A 32 VDYGKLEENLHKLGTFPFRGFVVQGSNGEFPFLTSSERLEVVSRVRQAMP--------KNRLL-LAGSGCE---STQATV 99 (307)
T ss_dssp BCHHHHHHHHHHHTTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHTSC--------TTSEE-EEECCCS---SHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHcC--------CCCcE-EEecCCC---CHHHHH
Confidence 44688999999999999999999998899999999999998887665432 23433 2343322 234455
Q ss_pred HHHHHHhcCCCceEEEEEecCC----CHHHHHHHHHHHHHHH
Q 044091 202 INVVETTKNNTRFQLIVAVSYS----GQYDLVQACQRIAMKV 239 (275)
Q Consensus 202 ~~~e~~T~~~~~~~lniai~Yg----GR~EIv~A~r~l~~~v 239 (275)
+.+....+-.-+..+-+.=.|- +.++|++-.+++++.+
T Consensus 100 ~la~~A~~~Gadavlv~~P~y~~~~~s~~~l~~~f~~ia~a~ 141 (307)
T 3s5o_A 100 EMTVSMAQVGADAAMVVTPCYYRGRMSSAALIHHYTKVADLS 141 (307)
T ss_dssp HHHHHHHHTTCSEEEEECCCTTGGGCCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHcCCCEEEEcCCCcCCCCCCHHHHHHHHHHHHhhc
Confidence 5444444445555565555563 7899999999998764
No 18
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=70.03 E-value=55 Score=29.07 Aligned_cols=106 Identities=18% Similarity=0.183 Sum_probs=74.2
Q ss_pred hhHHHHHHHHHHHHHcCCCeEEEEeeecCCCCCCHHHHHHHHHHHHHhHHHHHHHhhcCCcEEEEecCCCCCCHHHHHHH
Q 044091 122 AGVKSLKTLVELCCKWGIRVLTVFAFSSDNWFRPEVEVEFLMSLLESGVKEEKESFIRERIRISVIGDTSKLPKCLEELV 201 (275)
Q Consensus 122 ~G~~~l~eiv~wc~~~GI~~lTvYaFSteN~kRp~~EV~~Lm~l~~~~l~~~~~~~~~~~irvr~iGd~~~LP~~l~~~i 201 (275)
--.+.+.++++|..+.||.-+.+..-+.|.+.=+.+|-..+++...+... ..+.|- .|-.+. .+.+.+
T Consensus 18 iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~--------grvpvi-aGvg~~---~t~~ai 85 (294)
T 2ehh_A 18 VDYEALGNLIEFHVDNGTDAILVCGTTGESPTLTFEEHEKVIEFAVKRAA--------GRIKVI-AGTGGN---ATHEAV 85 (294)
T ss_dssp ECHHHHHHHHHHHHTTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHT--------TSSEEE-EECCCS---CHHHHH
T ss_pred cCHHHHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhC--------CCCcEE-EecCCC---CHHHHH
Confidence 34688999999999999999999888889999999999998887765432 234332 343321 234455
Q ss_pred HHHHHHhcCCCceEEEEEecC--CCHHHHHHHHHHHHHHH
Q 044091 202 INVVETTKNNTRFQLIVAVSY--SGQYDLVQACQRIAMKV 239 (275)
Q Consensus 202 ~~~e~~T~~~~~~~lniai~Y--gGR~EIv~A~r~l~~~v 239 (275)
+.+....+..-+..+-+.=.| -+.++|++-.+++++.+
T Consensus 86 ~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~ 125 (294)
T 2ehh_A 86 HLTAHAKEVGADGALVVVPYYNKPTQRGLYEHFKTVAQEV 125 (294)
T ss_dssp HHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhc
Confidence 544444444555555555555 48899999999998764
No 19
>3qc0_A Sugar isomerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-biology,; HET: UNL PG4; 1.45A {Sinorhizobium meliloti} PDB: 3ju2_A
Probab=70.00 E-value=31 Score=28.92 Aligned_cols=112 Identities=13% Similarity=0.086 Sum_probs=61.8
Q ss_pred chhhhHHHHHHHHHHHHHcCCCeEEEEeeecCCCCCCHHHHHHHHHHHHHhHHHHHHHhhcCCcEEEEecCC-------C
Q 044091 119 GYEAGVKSLKTLVELCCKWGIRVLTVFAFSSDNWFRPEVEVEFLMSLLESGVKEEKESFIRERIRISVIGDT-------S 191 (275)
Q Consensus 119 Gh~~G~~~l~eiv~wc~~~GI~~lTvYaFSteN~kRp~~EV~~Lm~l~~~~l~~~~~~~~~~~irvr~iGd~-------~ 191 (275)
......+.+.+.+++|..+|++.|.+..-....-..+.+ .-++.+.+.|++..+...+.||++-+---. .
T Consensus 77 ~r~~~~~~~~~~i~~a~~lG~~~v~~~~g~~~~~~~~~~---~~~~~~~~~l~~l~~~a~~~gv~l~lE~~~~~~~~~~~ 153 (275)
T 3qc0_A 77 GREKAIDDNRRAVDEAAELGADCLVLVAGGLPGGSKNID---AARRMVVEGIAAVLPHARAAGVPLAIEPLHPMYAADRA 153 (275)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCSCEEEECBCCCTTCCCHH---HHHHHHHHHHHHHHHHHHHHTCCEEECCCCGGGTTTTB
T ss_pred HHHHHHHHHHHHHHHHHHhCCCEEEEeeCCCCCCCcCHH---HHHHHHHHHHHHHHHHHHHcCCEEEEeECCCcccCCcc
Confidence 345677899999999999999999987521111112222 233455556666666677789888775311 1
Q ss_pred CCCHHHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHH
Q 044091 192 KLPKCLEELVINVVETTKNNTRFQLIVAVSYSGQYDLVQACQRIA 236 (275)
Q Consensus 192 ~LP~~l~~~i~~~e~~T~~~~~~~lniai~YgGR~EIv~A~r~l~ 236 (275)
.+. ..... .++-+.+..+-++.+.++=.+-+ .++.++++.+.
T Consensus 154 ~~~-~~~~~-~~l~~~~~~~vg~~~D~~h~~~~-~d~~~~l~~~~ 195 (275)
T 3qc0_A 154 CVN-TLGQA-LDICETLGPGVGVAIDVYHVWWD-PDLANQIARAG 195 (275)
T ss_dssp SCC-CHHHH-HHHHHHHCTTEEEEEEHHHHTTC-TTHHHHHHHHH
T ss_pred ccC-CHHHH-HHHHHHhCcccEEEEEhhhheeC-CCHHHHHHHcC
Confidence 111 12222 22233332244444433323333 46777777776
No 20
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=69.33 E-value=61 Score=28.75 Aligned_cols=106 Identities=15% Similarity=0.076 Sum_probs=73.0
Q ss_pred hhHHHHHHHHHHHHH-cCCCeEEEEeeecCCCCCCHHHHHHHHHHHHHhHHHHHHHhhcCCcEEEEecCCCCCCHHHHHH
Q 044091 122 AGVKSLKTLVELCCK-WGIRVLTVFAFSSDNWFRPEVEVEFLMSLLESGVKEEKESFIRERIRISVIGDTSKLPKCLEEL 200 (275)
Q Consensus 122 ~G~~~l~eiv~wc~~-~GI~~lTvYaFSteN~kRp~~EV~~Lm~l~~~~l~~~~~~~~~~~irvr~iGd~~~LP~~l~~~ 200 (275)
--.+.+.++++|..+ .||.-|.+..-+.|.+.=+.+|-..+++...+... ..+.|- .|-.+. .+.+.
T Consensus 21 iD~~~l~~lv~~li~~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~--------grvpvi-aGvg~~---~t~~a 88 (293)
T 1f6k_A 21 INEKGLRQIIRHNIDKMKVDGLYVGGSTGENFMLSTEEKKEIFRIAKDEAK--------DQIALI-AQVGSV---NLKEA 88 (293)
T ss_dssp BCHHHHHHHHHHHHHTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHT--------TSSEEE-EECCCS---CHHHH
T ss_pred cCHHHHHHHHHHHHhhCCCcEEEeCccccchhhCCHHHHHHHHHHHHHHhC--------CCCeEE-EecCCC---CHHHH
Confidence 447889999999999 99999999888889999999999998887766432 234332 333321 13344
Q ss_pred HHHHHHHhcCCCceEEEEEecC--CCHHHHHHHHHHHHHHH
Q 044091 201 VINVVETTKNNTRFQLIVAVSY--SGQYDLVQACQRIAMKV 239 (275)
Q Consensus 201 i~~~e~~T~~~~~~~lniai~Y--gGR~EIv~A~r~l~~~v 239 (275)
++.+....+-.-+..+-+.=.| .+.++|++-.+.+++.+
T Consensus 89 i~la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~va~a~ 129 (293)
T 1f6k_A 89 VELGKYATELGYDCLSAVTPFYYKFSFPEIKHYYDTIIAET 129 (293)
T ss_dssp HHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhC
Confidence 4444433333444455554445 47899999999999875
No 21
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=68.66 E-value=54 Score=29.06 Aligned_cols=106 Identities=15% Similarity=0.174 Sum_probs=72.9
Q ss_pred hhHHHHHHHHHHHHHcCCCeEEEEeeecCCCCCCHHHHHHHHHHHHHhHHHHHHHhhcCCcEEEEecCCCCCCHHHHHHH
Q 044091 122 AGVKSLKTLVELCCKWGIRVLTVFAFSSDNWFRPEVEVEFLMSLLESGVKEEKESFIRERIRISVIGDTSKLPKCLEELV 201 (275)
Q Consensus 122 ~G~~~l~eiv~wc~~~GI~~lTvYaFSteN~kRp~~EV~~Lm~l~~~~l~~~~~~~~~~~irvr~iGd~~~LP~~l~~~i 201 (275)
--.+.+.++++|..+.||.-+.+..-+.|...=+.+|-..+++...+... ..+.|- .|--+. .+.+.+
T Consensus 18 iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~--------gr~pvi-aGvg~~---~t~~ai 85 (289)
T 2yxg_A 18 VDFDGLEENINFLIENGVSGIVAVGTTGESPTLSHEEHKKVIEKVVDVVN--------GRVQVI-AGAGSN---CTEEAI 85 (289)
T ss_dssp ECHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHT--------TSSEEE-EECCCS---SHHHHH
T ss_pred cCHHHHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhC--------CCCcEE-EeCCCC---CHHHHH
Confidence 34688999999999999999999888889999999999998887665432 234432 343321 234444
Q ss_pred HHHHHHhcCCCceEEEEEecC--CCHHHHHHHHHHHHHHH
Q 044091 202 INVVETTKNNTRFQLIVAVSY--SGQYDLVQACQRIAMKV 239 (275)
Q Consensus 202 ~~~e~~T~~~~~~~lniai~Y--gGR~EIv~A~r~l~~~v 239 (275)
+.+....+-.-+..+-+.=.| -+.++|.+-.+++++.+
T Consensus 86 ~la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~ia~a~ 125 (289)
T 2yxg_A 86 ELSVFAEDVGADAVLSITPYYNKPTQEGLRKHFGKVAESI 125 (289)
T ss_dssp HHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhc
Confidence 444433333444555555455 48899999999998764
No 22
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=68.08 E-value=67 Score=28.73 Aligned_cols=106 Identities=14% Similarity=0.115 Sum_probs=74.7
Q ss_pred hhHHHHHHHHHHHHHcCCCeEEEEeeecCCCCCCHHHHHHHHHHHHHhHHHHHHHhhcCCcEEEEecCCCCCCHHHHHHH
Q 044091 122 AGVKSLKTLVELCCKWGIRVLTVFAFSSDNWFRPEVEVEFLMSLLESGVKEEKESFIRERIRISVIGDTSKLPKCLEELV 201 (275)
Q Consensus 122 ~G~~~l~eiv~wc~~~GI~~lTvYaFSteN~kRp~~EV~~Lm~l~~~~l~~~~~~~~~~~irvr~iGd~~~LP~~l~~~i 201 (275)
--.+.+.++++|..+.||.-|.+..-+.|.+.=+.+|-..+++...+... ..+.|- .|--+. .+.+.+
T Consensus 34 iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~--------grvpvi-aGvg~~---st~~ai 101 (304)
T 3cpr_A 34 IDIAAGREVAAYLVDKGLDSLVLAGTTGESPTTTAAEKLELLKAVREEVG--------DRAKLI-AGVGTN---NTRTSV 101 (304)
T ss_dssp BCHHHHHHHHHHHHHTTCCEEEESSTTTTTTTSCHHHHHHHHHHHHHHHT--------TTSEEE-EECCCS---CHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhC--------CCCcEE-ecCCCC---CHHHHH
Confidence 44788999999999999999999988899999999999998887766442 234432 343321 234444
Q ss_pred HHHHHHhcCCCceEEEEEecC--CCHHHHHHHHHHHHHHH
Q 044091 202 INVVETTKNNTRFQLIVAVSY--SGQYDLVQACQRIAMKV 239 (275)
Q Consensus 202 ~~~e~~T~~~~~~~lniai~Y--gGR~EIv~A~r~l~~~v 239 (275)
+.+....+-.-+..+.+.=.| .+.++|++-.+.+++.+
T Consensus 102 ~la~~A~~~Gadavlv~~P~y~~~~~~~l~~~f~~ia~a~ 141 (304)
T 3cpr_A 102 ELAEAAASAGADGLLVVTPYYSKPSQEGLLAHFGAIAAAT 141 (304)
T ss_dssp HHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhc
Confidence 444444444455555555445 47899999999998764
No 23
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=67.93 E-value=26 Score=31.30 Aligned_cols=105 Identities=16% Similarity=0.155 Sum_probs=72.6
Q ss_pred hhHHHHHHHHHHHHHcCCCeEEEEeeecCCCCCCHHHHHHHHHHHHHhHHHHHHHhhcCCcEEE-EecCCCCCCHHHHHH
Q 044091 122 AGVKSLKTLVELCCKWGIRVLTVFAFSSDNWFRPEVEVEFLMSLLESGVKEEKESFIRERIRIS-VIGDTSKLPKCLEEL 200 (275)
Q Consensus 122 ~G~~~l~eiv~wc~~~GI~~lTvYaFSteN~kRp~~EV~~Lm~l~~~~l~~~~~~~~~~~irvr-~iGd~~~LP~~l~~~ 200 (275)
--.+.+.++++|..+.||.-+.+..-+.|.+.=+.+|-..+++...+.... .+.|- -+|..+ +.+.
T Consensus 21 iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~g--------r~pviaGvg~~~-----t~~a 87 (294)
T 3b4u_A 21 VDIDAMIAHARRCLSNGCDSVTLFGTTGEGCSVGSRERQAILSSFIAAGIA--------PSRIVTGVLVDS-----IEDA 87 (294)
T ss_dssp BCHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHTTCC--------GGGEEEEECCSS-----HHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC--------CCcEEEeCCCcc-----HHHH
Confidence 447889999999999999999998888899999999999988877665431 23322 134332 3444
Q ss_pred HHHHHHHhcCCCceEEEEEecC---CCHHHHHHHHHHHHHHH
Q 044091 201 VINVVETTKNNTRFQLIVAVSY---SGQYDLVQACQRIAMKV 239 (275)
Q Consensus 201 i~~~e~~T~~~~~~~lniai~Y---gGR~EIv~A~r~l~~~v 239 (275)
++.+....+-.-+..+-+.=.| -+.++|++-.+.+++.+
T Consensus 88 i~la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~va~a~ 129 (294)
T 3b4u_A 88 ADQSAEALNAGARNILLAPPSYFKNVSDDGLFAWFSAVFSKI 129 (294)
T ss_dssp HHHHHHHHHTTCSEEEECCCCSSCSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCEEEEcCCcCCCCCCHHHHHHHHHHHHHhc
Confidence 4444444333444444444334 36799999999999876
No 24
>3vni_A Xylose isomerase domain protein TIM barrel; D-psicose 3-epimerase, ketohexose; 1.98A {Clostridium cellulolyticum} PDB: 3vnj_A* 3vnl_A* 3vnk_A* 3vnm_A*
Probab=67.33 E-value=9.2 Score=32.89 Aligned_cols=67 Identities=7% Similarity=-0.102 Sum_probs=43.6
Q ss_pred chhhhHHHHHHHHHHHHHcCCCeEEEEeeecC--CCC--CCHHHHHHHHHHHHHhHHHHHHHhhcCCcEEEEec
Q 044091 119 GYEAGVKSLKTLVELCCKWGIRVLTVFAFSSD--NWF--RPEVEVEFLMSLLESGVKEEKESFIRERIRISVIG 188 (275)
Q Consensus 119 Gh~~G~~~l~eiv~wc~~~GI~~lTvYaFSte--N~k--Rp~~EV~~Lm~l~~~~l~~~~~~~~~~~irvr~iG 188 (275)
......+.+.+.++.|.++|++.+.+...+.- .+. .+.+ .-++.+.+.|++..+...+.||++-+--
T Consensus 82 ~r~~~~~~~~~~i~~a~~lG~~~v~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~l~~~a~~~Gv~l~lEn 152 (294)
T 3vni_A 82 IRKNAKAFYTDLLKRLYKLDVHLIGGALYSYWPIDYTKTIDKK---GDWERSVESVREVAKVAEACGVDFCLEV 152 (294)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCEEEESTTSCSSCCTTSCCCHH---HHHHHHHHHHHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHhCCCeeeccccCCCCCcCCCCCCHH---HHHHHHHHHHHHHHHHHHHcCCEEEEEe
Confidence 34567889999999999999999985222211 222 1222 2344455566666667778899987753
No 25
>2qul_A D-tagatose 3-epimerase; beta/alpha barrel, isomerase; 1.79A {Pseudomonas cichorii} PDB: 2ou4_A 2qum_A* 2qun_A*
Probab=66.40 E-value=29 Score=29.39 Aligned_cols=68 Identities=15% Similarity=0.099 Sum_probs=42.1
Q ss_pred hhhhHHHHHHHHHHHHHcCCCeEEEEeeec--CCCCCCHHHHHHHHHHHHHhHHHHHHHhhcCCcEEEEe
Q 044091 120 YEAGVKSLKTLVELCCKWGIRVLTVFAFSS--DNWFRPEVEVEFLMSLLESGVKEEKESFIRERIRISVI 187 (275)
Q Consensus 120 h~~G~~~l~eiv~wc~~~GI~~lTvYaFSt--eN~kRp~~EV~~Lm~l~~~~l~~~~~~~~~~~irvr~i 187 (275)
..+..+.+.+.++.|.++|++.+.+..++. .+|..+....+.-++.+.+.|++..+...+.||++-+-
T Consensus 83 r~~~~~~~~~~i~~a~~lG~~~v~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~lE 152 (290)
T 2qul_A 83 RDAGTEYVKRLLDDCHLLGAPVFAGLTFCAWPQSPPLDMKDKRPYVDRAIESVRRVIKVAEDYGIIYALE 152 (290)
T ss_dssp HHHHHHHHHHHHHHHHHHTCSEEEEEEEEESSCCCCTTCCCCHHHHHHHHHHHHTTHHHHHHHTCEEEEE
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEeeccccCCcccCCCcccHHHHHHHHHHHHHHHHHHHHHcCCEEEEE
Confidence 456678999999999999999999755442 11111100011223444555555556667789988775
No 26
>2j6v_A UV endonuclease, UVDE; plasmid, TIM barrel, DNA repair, DNA binding protein, lyase; HET: KCX ALY; 1.55A {Thermus thermophilus} PDB: 3bzg_A 3c0s_A* 3c0l_A 3c0q_A* 3bzj_A
Probab=64.63 E-value=36 Score=30.59 Aligned_cols=59 Identities=12% Similarity=0.173 Sum_probs=36.9
Q ss_pred hhHHHHHHHHHHHHHcCCCeEEE----EeeecCC---CCCCHHHHHHHHHHHHHhHHHHHHHhhcCCcEEEEec
Q 044091 122 AGVKSLKTLVELCCKWGIRVLTV----FAFSSDN---WFRPEVEVEFLMSLLESGVKEEKESFIRERIRISVIG 188 (275)
Q Consensus 122 ~G~~~l~eiv~wc~~~GI~~lTv----YaFSteN---~kRp~~EV~~Lm~l~~~~l~~~~~~~~~~~irvr~iG 188 (275)
.-++.+.++++||.+.||+..-+ |.|-+.| |+..+ +....+.+..+.+.++|+++-+-+
T Consensus 58 ~nl~~l~~~l~~~~~~gi~~~ri~s~~f~~ft~~~~~w~~~~--------~~~~~~~~~~~~~~~~gi~i~~H~ 123 (301)
T 2j6v_A 58 ENLRDLERILRFNADHGFALFRIGQHLIPFASHPLFPYDWEG--------AYEEELARLGALARAFGQRLSMHP 123 (301)
T ss_dssp HHHHHHHHHHHHHHHHTCCEEECCGGGSTTTTSTTCCSCHHH--------HHHHHHHHHHHHHHHTTCEEEECC
T ss_pred HHHHHHHHHHHHHHHcCCCEEEeccCcccccCCCcccCCcCC--------CCHHHHHHHHHHHHHcCCeEEEeC
Confidence 44788999999999999888776 4444443 54432 112223333344667788876654
No 27
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=64.16 E-value=72 Score=28.69 Aligned_cols=96 Identities=11% Similarity=0.125 Sum_probs=60.3
Q ss_pred HHHHHHcCCCeEEEEeee-----cCCCCCCHHHHHHHHHHHHHhHHHHHHHhhcCCcEEEE-----ecCC--CCC-CHHH
Q 044091 131 VELCCKWGIRVLTVFAFS-----SDNWFRPEVEVEFLMSLLESGVKEEKESFIRERIRISV-----IGDT--SKL-PKCL 197 (275)
Q Consensus 131 v~wc~~~GI~~lTvYaFS-----teN~kRp~~EV~~Lm~l~~~~l~~~~~~~~~~~irvr~-----iGd~--~~L-P~~l 197 (275)
++.+.+.|++.+.+|.-. ..|++++.+|+-..+.-..+ ...+.|..|++ .|.. ... |+.+
T Consensus 87 i~~a~~~g~~~v~i~~~~sd~~~~~~l~~s~~e~l~~~~~~v~-------~ak~~G~~v~~~i~~~~~~~~~~~~~~~~~ 159 (307)
T 1ydo_A 87 LENALEGGINEACVFMSASETHNRKNINKSTSESLHILKQVNN-------DAQKANLTTRAYLSTVFGCPYEKDVPIEQV 159 (307)
T ss_dssp HHHHHHHTCSEEEEEEESSHHHHHTTTCSCHHHHHHHHHHHHH-------HHHHTTCEEEEEEECTTCBTTTBCCCHHHH
T ss_pred HHHHHhCCcCEEEEEeecCHHHHHHHhCCCHHHHHHHHHHHHH-------HHHHCCCEEEEEEEEEecCCcCCCCCHHHH
Confidence 555667899999998743 36999999886554443333 34456777763 2211 122 4555
Q ss_pred HHHHHHHHHHhcCCCceEEEEE--ecCCCHHHHHHHHHHHHH
Q 044091 198 EELVINVVETTKNNTRFQLIVA--VSYSGQYDLVQACQRIAM 237 (275)
Q Consensus 198 ~~~i~~~e~~T~~~~~~~lnia--i~YgGR~EIv~A~r~l~~ 237 (275)
.+.++.+.+.-.+ .|+|| +++.-=+++.+.++.+.+
T Consensus 160 ~~~~~~~~~~Ga~----~i~l~DT~G~~~P~~v~~lv~~l~~ 197 (307)
T 1ydo_A 160 IRLSEALFEFGIS----ELSLGDTIGAANPAQVETVLEALLA 197 (307)
T ss_dssp HHHHHHHHHHTCS----CEEEECSSCCCCHHHHHHHHHHHHT
T ss_pred HHHHHHHHhcCCC----EEEEcCCCCCcCHHHHHHHHHHHHH
Confidence 6666666665332 57777 677777777777776654
No 28
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=64.07 E-value=20 Score=32.01 Aligned_cols=106 Identities=19% Similarity=0.124 Sum_probs=73.5
Q ss_pred hhHHHHHHHHHHHHHcCCCeEEEEeeecCCCCCCHHHHHHHHHHHHHhHHHHHHHhhcCCcEEEEecCCCCCCHHHHHHH
Q 044091 122 AGVKSLKTLVELCCKWGIRVLTVFAFSSDNWFRPEVEVEFLMSLLESGVKEEKESFIRERIRISVIGDTSKLPKCLEELV 201 (275)
Q Consensus 122 ~G~~~l~eiv~wc~~~GI~~lTvYaFSteN~kRp~~EV~~Lm~l~~~~l~~~~~~~~~~~irvr~iGd~~~LP~~l~~~i 201 (275)
--.+.+.++++|..+.||.-+.+..-+.|.+.=+.+|-..+++...+... ..+.|- .|--+. .+.+.+
T Consensus 18 iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~--------gr~pvi-aGvg~~---~t~~ai 85 (292)
T 2vc6_A 18 IDEVALHDLVEWQIEEGSFGLVPCGTTGESPTLSKSEHEQVVEITIKTAN--------GRVPVI-AGAGSN---STAEAI 85 (292)
T ss_dssp ECHHHHHHHHHHHHHTTCSEEETTSGGGTGGGSCHHHHHHHHHHHHHHHT--------TSSCBE-EECCCS---SHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhC--------CCCcEE-EecCCc---cHHHHH
Confidence 34688999999999999999999888889999999999998887766543 123322 232221 234445
Q ss_pred HHHHHHhcCCCceEEEEEecCC--CHHHHHHHHHHHHHHH
Q 044091 202 INVVETTKNNTRFQLIVAVSYS--GQYDLVQACQRIAMKV 239 (275)
Q Consensus 202 ~~~e~~T~~~~~~~lniai~Yg--GR~EIv~A~r~l~~~v 239 (275)
+.+....+...+..+-+.=.|. +.++|++-.+.+++.+
T Consensus 86 ~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~ia~a~ 125 (292)
T 2vc6_A 86 AFVRHAQNAGADGVLIVSPYYNKPTQEGIYQHFKAIDAAS 125 (292)
T ss_dssp HHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhC
Confidence 4444444444555555555553 8899999999998764
No 29
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=63.51 E-value=76 Score=28.29 Aligned_cols=107 Identities=18% Similarity=0.127 Sum_probs=74.2
Q ss_pred hhHHHHHHHHHHHHHcCCCeEEEEeeecCCCCCCHHHHHHHHHHHHHhHHHHHHHhhcCCcEEEEecCCCCCCHHHHHHH
Q 044091 122 AGVKSLKTLVELCCKWGIRVLTVFAFSSDNWFRPEVEVEFLMSLLESGVKEEKESFIRERIRISVIGDTSKLPKCLEELV 201 (275)
Q Consensus 122 ~G~~~l~eiv~wc~~~GI~~lTvYaFSteN~kRp~~EV~~Lm~l~~~~l~~~~~~~~~~~irvr~iGd~~~LP~~l~~~i 201 (275)
--.+.+.++++|..+.||.-+.+..-+.|.+.=+.+|...+++...+.... ..+.|- .|--+. .+.+.+
T Consensus 25 iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g-------~rvpvi-aGvg~~---~t~~ai 93 (301)
T 3m5v_A 25 VDEQSYARLIKRQIENGIDAVVPVGTTGESATLTHEEHRTCIEIAVETCKG-------TKVKVL-AGAGSN---ATHEAV 93 (301)
T ss_dssp ECHHHHHHHHHHHHHTTCCEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTT-------SSCEEE-EECCCS---SHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC-------CCCeEE-EeCCCC---CHHHHH
Confidence 347889999999999999999998888899999999999988877664421 134442 243322 234455
Q ss_pred HHHHHHhcCCCceEEEEEecC--CCHHHHHHHHHHHHHHH
Q 044091 202 INVVETTKNNTRFQLIVAVSY--SGQYDLVQACQRIAMKV 239 (275)
Q Consensus 202 ~~~e~~T~~~~~~~lniai~Y--gGR~EIv~A~r~l~~~v 239 (275)
+.+....+-.-+..+-+.=.| -+.++|++-.+++++.+
T Consensus 94 ~la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~ 133 (301)
T 3m5v_A 94 GLAKFAKEHGADGILSVAPYYNKPTQQGLYEHYKAIAQSV 133 (301)
T ss_dssp HHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhC
Confidence 544444444455555554444 46799999999999874
No 30
>3l23_A Sugar phosphate isomerase/epimerase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=63.17 E-value=16 Score=32.12 Aligned_cols=60 Identities=13% Similarity=0.065 Sum_probs=41.5
Q ss_pred hhhhHHHHHHHHHHHHHcCCCeEEEEeeecCCCCCCHHHHHHHHHHHHHhHHHHHHHhhcCCcE--EEE
Q 044091 120 YEAGVKSLKTLVELCCKWGIRVLTVFAFSSDNWFRPEVEVEFLMSLLESGVKEEKESFIRERIR--ISV 186 (275)
Q Consensus 120 h~~G~~~l~eiv~wc~~~GI~~lTvYaFSteN~kRp~~EV~~Lm~l~~~~l~~~~~~~~~~~ir--vr~ 186 (275)
..+..+.+.+.++.|.++|++.|.+..... ....+.. +.+.+.|++..+...+.||+ +-+
T Consensus 103 ~~~~~~~~~~~i~~A~~lG~~~v~~~~~~~---~~~~~~~----~~~~~~l~~l~~~a~~~Gv~~~l~~ 164 (303)
T 3l23_A 103 TPKIMEYWKATAADHAKLGCKYLIQPMMPT---ITTHDEA----KLVCDIFNQASDVIKAEGIATGFGY 164 (303)
T ss_dssp HHHHHHHHHHHHHHHHHTTCSEEEECSCCC---CCSHHHH----HHHHHHHHHHHHHHHHTTCTTCEEE
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEECCCCC---CCCHHHH----HHHHHHHHHHHHHHHHCCCcceEEE
Confidence 356688999999999999999998843221 1223333 44555666666677888998 754
No 31
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=63.11 E-value=70 Score=28.60 Aligned_cols=106 Identities=18% Similarity=0.108 Sum_probs=73.0
Q ss_pred hhHHHHHHHHHHHHHcCCCeEEEEeeecCCCCCCHHHHHHHHHHHHHhHHHHHHHhhcCCcEEEEecCCCCCCHHHHHHH
Q 044091 122 AGVKSLKTLVELCCKWGIRVLTVFAFSSDNWFRPEVEVEFLMSLLESGVKEEKESFIRERIRISVIGDTSKLPKCLEELV 201 (275)
Q Consensus 122 ~G~~~l~eiv~wc~~~GI~~lTvYaFSteN~kRp~~EV~~Lm~l~~~~l~~~~~~~~~~~irvr~iGd~~~LP~~l~~~i 201 (275)
--.+.+.++++|..+.||.-|.+..-+.|.+.=+.+|-..+++...+... ..+.|- .|--+. .+.+.+
T Consensus 30 iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~--------grvpVi-aGvg~~---~t~~ai 97 (301)
T 1xky_A 30 IDFAKTTKLVNYLIDNGTTAIVVGGTTGESPTLTSEEKVALYRHVVSVVD--------KRVPVI-AGTGSN---NTHASI 97 (301)
T ss_dssp BCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHT--------TSSCEE-EECCCS---CHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhC--------CCceEE-eCCCCC---CHHHHH
Confidence 34788999999999999999999888889999999999998887766542 123332 233221 234444
Q ss_pred HHHHHHhcCCCceEEEEEecC--CCHHHHHHHHHHHHHHH
Q 044091 202 INVVETTKNNTRFQLIVAVSY--SGQYDLVQACQRIAMKV 239 (275)
Q Consensus 202 ~~~e~~T~~~~~~~lniai~Y--gGR~EIv~A~r~l~~~v 239 (275)
+.+....+-.-+..+.+.=.| .+.++|++-.+++++.+
T Consensus 98 ~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~ 137 (301)
T 1xky_A 98 DLTKKATEVGVDAVMLVAPYYNKPSQEGMYQHFKAIAEST 137 (301)
T ss_dssp HHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHTC
T ss_pred HHHHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhc
Confidence 444444444445555554444 37899999999998753
No 32
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=62.73 E-value=51 Score=30.23 Aligned_cols=106 Identities=13% Similarity=0.113 Sum_probs=72.8
Q ss_pred hhHHHHHHHHHHHHHcCCCeEEEEeeecCCCCCCHHHHHHHHHHHHHhHHHHHHHhhcCCcEEEEecCCCCCCHHHHHHH
Q 044091 122 AGVKSLKTLVELCCKWGIRVLTVFAFSSDNWFRPEVEVEFLMSLLESGVKEEKESFIRERIRISVIGDTSKLPKCLEELV 201 (275)
Q Consensus 122 ~G~~~l~eiv~wc~~~GI~~lTvYaFSteN~kRp~~EV~~Lm~l~~~~l~~~~~~~~~~~irvr~iGd~~~LP~~l~~~i 201 (275)
--++.+.++++|..+.||.-|.+..-+.|.+.=+.+|-..+++...+... ..+.|- +|--+. .+.+.+
T Consensus 49 ID~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~--------grvpVi-aGvg~~---st~eai 116 (343)
T 2v9d_A 49 LDKPGTAALIDDLIKAGVDGLFFLGSGGEFSQLGAEERKAIARFAIDHVD--------RRVPVL-IGTGGT---NARETI 116 (343)
T ss_dssp BCHHHHHHHHHHHHHTTCSCEEESSTTTTGGGSCHHHHHHHHHHHHHHHT--------TSSCEE-EECCSS---CHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhC--------CCCcEE-EecCCC---CHHHHH
Confidence 44788999999999999999999888889999999999998887766542 223332 333221 134444
Q ss_pred HHHHHHhcCCCceEEEEEecC--CCHHHHHHHHHHHHHHH
Q 044091 202 INVVETTKNNTRFQLIVAVSY--SGQYDLVQACQRIAMKV 239 (275)
Q Consensus 202 ~~~e~~T~~~~~~~lniai~Y--gGR~EIv~A~r~l~~~v 239 (275)
+.+....+-..+..+.+.=.| .+.++|++-.+++++.+
T Consensus 117 ~la~~A~~~Gadavlv~~P~Y~~~s~~~l~~~f~~VA~a~ 156 (343)
T 2v9d_A 117 ELSQHAQQAGADGIVVINPYYWKVSEANLIRYFEQVADSV 156 (343)
T ss_dssp HHHHHHHHHTCSEEEEECCSSSCCCHHHHHHHHHHHHHTC
T ss_pred HHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhc
Confidence 444443333445555555445 48899999999998753
No 33
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=61.91 E-value=70 Score=28.37 Aligned_cols=105 Identities=17% Similarity=0.099 Sum_probs=75.5
Q ss_pred hhHHHHHHHHHHHHHcCCCeEEEEeeecCCCCCCHHHHHHHHHHHHHhHHHHHHHhhcCCcEEEEecCCCCCCHHHHHHH
Q 044091 122 AGVKSLKTLVELCCKWGIRVLTVFAFSSDNWFRPEVEVEFLMSLLESGVKEEKESFIRERIRISVIGDTSKLPKCLEELV 201 (275)
Q Consensus 122 ~G~~~l~eiv~wc~~~GI~~lTvYaFSteN~kRp~~EV~~Lm~l~~~~l~~~~~~~~~~~irvr~iGd~~~LP~~l~~~i 201 (275)
--.+.+.++++|..+.||.-+.+..-+.|.+.=+.+|-..+++...+... ..+.|- .|--+ ..+.+.+
T Consensus 19 iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~--------gr~pvi-aGvg~---~~t~~ai 86 (292)
T 2ojp_A 19 VCRASLKKLIDYHVASGTSAIVSVGTTGESATLNHDEHADVVMMTLDLAD--------GRIPVI-AGTGA---NATAEAI 86 (292)
T ss_dssp BCHHHHHHHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHT--------TSSCEE-EECCC---SSHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhC--------CCCcEE-EecCC---ccHHHHH
Confidence 44788999999999999999999888889999999999998887766542 123332 23322 1345666
Q ss_pred HHHHHHhcCCCceEEEEEecC--CCHHHHHHHHHHHHHH
Q 044091 202 INVVETTKNNTRFQLIVAVSY--SGQYDLVQACQRIAMK 238 (275)
Q Consensus 202 ~~~e~~T~~~~~~~lniai~Y--gGR~EIv~A~r~l~~~ 238 (275)
+.+....+-.-+..+-+.=.| .+.++|++-.+.+++.
T Consensus 87 ~la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~ia~a 125 (292)
T 2ojp_A 87 SLTQRFNDSGIVGCLTVTPYYNRPSQEGLYQHFKAIAEH 125 (292)
T ss_dssp HHHHHTTTSSCSEEEEECCCSSCCCHHHHHHHHHHHHTT
T ss_pred HHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHh
Confidence 666665555555566665555 4889999999999865
No 34
>1i60_A IOLI protein; beta barrel, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: c.1.15.4 PDB: 1i6n_A
Probab=61.10 E-value=61 Score=27.00 Aligned_cols=65 Identities=9% Similarity=0.064 Sum_probs=42.4
Q ss_pred hhhhHHHHHHHHHHHHHcCCCeEEEEeeecCCCCCCHHHHHHHHHHHHHhHHHHHHHhhcCCcEEEEec
Q 044091 120 YEAGVKSLKTLVELCCKWGIRVLTVFAFSSDNWFRPEVEVEFLMSLLESGVKEEKESFIRERIRISVIG 188 (275)
Q Consensus 120 h~~G~~~l~eiv~wc~~~GI~~lTvYaFSteN~kRp~~EV~~Lm~l~~~~l~~~~~~~~~~~irvr~iG 188 (275)
.....+.+.+.++.|.++|++.|.+...... ...+.+ .-++.+.+.|++..+...+.||++-+--
T Consensus 79 ~~~~~~~~~~~i~~a~~lG~~~v~~~~g~~~-~~~~~~---~~~~~~~~~l~~l~~~a~~~gv~l~lEn 143 (278)
T 1i60_A 79 HNEIITEFKGMMETCKTLGVKYVVAVPLVTE-QKIVKE---EIKKSSVDVLTELSDIAEPYGVKIALEF 143 (278)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCEEEEECCBCS-SCCCHH---HHHHHHHHHHHHHHHHHGGGTCEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEEecCCCC-CCCCHH---HHHHHHHHHHHHHHHHHHhcCCEEEEEe
Confidence 3466889999999999999999998543211 112322 2234445555555566778899887744
No 35
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=61.05 E-value=53 Score=29.09 Aligned_cols=103 Identities=12% Similarity=0.018 Sum_probs=71.4
Q ss_pred hhHHHHHHHHHHHHHcCCCeEEEEeeecCCCCCCHHHHHHHHHHHHHhHHHHHHHhhcCCcEEEEecCCCCCCHHHHHHH
Q 044091 122 AGVKSLKTLVELCCKWGIRVLTVFAFSSDNWFRPEVEVEFLMSLLESGVKEEKESFIRERIRISVIGDTSKLPKCLEELV 201 (275)
Q Consensus 122 ~G~~~l~eiv~wc~~~GI~~lTvYaFSteN~kRp~~EV~~Lm~l~~~~l~~~~~~~~~~~irvr~iGd~~~LP~~l~~~i 201 (275)
--.+.+.++++|..+.||.-+.+..-+.|.+.=+.+|-..+++...+... | -+.|--+. .+.+.+
T Consensus 16 iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~---------g---vi~Gvg~~---~t~~ai 80 (286)
T 2r91_A 16 LDPELFANHVKNITSKGVDVVFVAGTTGLGPALSLQEKMELTDAATSAAR---------R---VIVQVASL---NADEAI 80 (286)
T ss_dssp ECHHHHHHHHHHHHHTTCCEEEETSTTTTGGGSCHHHHHHHHHHHHHHCS---------S---EEEECCCS---SHHHHH
T ss_pred cCHHHHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhC---------C---EEEeeCCC---CHHHHH
Confidence 34688999999999999999999888889999999999998887665432 3 23443322 234444
Q ss_pred HHHHHHhcCCCceEEEEEecC---CCHHHHHHHHHHHHHHH
Q 044091 202 INVVETTKNNTRFQLIVAVSY---SGQYDLVQACQRIAMKV 239 (275)
Q Consensus 202 ~~~e~~T~~~~~~~lniai~Y---gGR~EIv~A~r~l~~~v 239 (275)
+.+....+-.-+..+-+.=.| -+.++|++-.+.+++.+
T Consensus 81 ~la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~va~a~ 121 (286)
T 2r91_A 81 ALAKYAESRGAEAVASLPPYYFPRLSERQIAKYFRDLCSAV 121 (286)
T ss_dssp HHHHHHHHTTCSEEEECCSCSSTTCCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHhcCCCEEEEcCCcCCCCCCHHHHHHHHHHHHHhc
Confidence 444444333445455554444 36799999999998764
No 36
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=60.70 E-value=59 Score=29.14 Aligned_cols=105 Identities=22% Similarity=0.181 Sum_probs=71.3
Q ss_pred hhHHHHHHHHHHHHHcCCCeEEEEeeecCCCCCCHHHHHHHHHHHHHhHHHHHHHhhcCCcEEEEecCCCCCCHHHHHHH
Q 044091 122 AGVKSLKTLVELCCKWGIRVLTVFAFSSDNWFRPEVEVEFLMSLLESGVKEEKESFIRERIRISVIGDTSKLPKCLEELV 201 (275)
Q Consensus 122 ~G~~~l~eiv~wc~~~GI~~lTvYaFSteN~kRp~~EV~~Lm~l~~~~l~~~~~~~~~~~irvr~iGd~~~LP~~l~~~i 201 (275)
--.+.+.++++|..+.||.-|.+..-+.|.+.=+.+|-..+++...+... ..+.|- .|--+.=-.+..+..
T Consensus 30 iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~--------grvpVi-aGvg~~st~~ai~la 100 (306)
T 1o5k_A 30 LDLESYERLVRYQLENGVNALIVLGTTGESPTVNEDEREKLVSRTLEIVD--------GKIPVI-VGAGTNSTEKTLKLV 100 (306)
T ss_dssp ECHHHHHHHHHHHHHTTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHT--------TSSCEE-EECCCSCHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhC--------CCCeEE-EcCCCccHHHHHHHH
Confidence 34688999999999999999999988899999999999999887776543 123332 333221123333444
Q ss_pred HHHHHHhcCCCceEEEEEecC--CCHHHHHHHHHHHHHH
Q 044091 202 INVVETTKNNTRFQLIVAVSY--SGQYDLVQACQRIAMK 238 (275)
Q Consensus 202 ~~~e~~T~~~~~~~lniai~Y--gGR~EIv~A~r~l~~~ 238 (275)
+.+++. ..+..+-+.=.| .+.++|++-.+++++.
T Consensus 101 ~~A~~~---Gadavlv~~P~y~~~s~~~l~~~f~~va~a 136 (306)
T 1o5k_A 101 KQAEKL---GANGVLVVTPYYNKPTQEGLYQHYKYISER 136 (306)
T ss_dssp HHHHHH---TCSEEEEECCCSSCCCHHHHHHHHHHHHTT
T ss_pred HHHHhc---CCCEEEECCCCCCCCCHHHHHHHHHHHHHh
Confidence 444433 444455554444 3789999999999864
No 37
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=60.53 E-value=27 Score=31.60 Aligned_cols=106 Identities=9% Similarity=0.146 Sum_probs=72.3
Q ss_pred hhHHHHHHHHHHHHHcCCCeEEEEeeecCCCCCCHHHHHHHHHHHHHhHHHHHHHhhcCCcEEEEecCCCCCCHHHHHHH
Q 044091 122 AGVKSLKTLVELCCKWGIRVLTVFAFSSDNWFRPEVEVEFLMSLLESGVKEEKESFIRERIRISVIGDTSKLPKCLEELV 201 (275)
Q Consensus 122 ~G~~~l~eiv~wc~~~GI~~lTvYaFSteN~kRp~~EV~~Lm~l~~~~l~~~~~~~~~~~irvr~iGd~~~LP~~l~~~i 201 (275)
--++.+.++++|..+.||.-|.+..-+.|.+.=+.+|...+++...+... ..+.|- .|--+. .+.+.+
T Consensus 42 iD~~~l~~lv~~li~~Gv~Gi~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~--------grvpVi-aGvg~~---~t~~ai 109 (315)
T 3na8_A 42 LDLPALGRSIERLIDGGVHAIAPLGSTGEGAYLSDPEWDEVVDFTLKTVA--------HRVPTI-VSVSDL---TTAKTV 109 (315)
T ss_dssp BCHHHHHHHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHT--------TSSCBE-EECCCS---SHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhC--------CCCcEE-EecCCC---CHHHHH
Confidence 44788999999999999999999998889999999999999887776543 123332 232221 234444
Q ss_pred HHHHHHhcCCCceEEEEEecC--CCHHHHHHHHHHHHHHH
Q 044091 202 INVVETTKNNTRFQLIVAVSY--SGQYDLVQACQRIAMKV 239 (275)
Q Consensus 202 ~~~e~~T~~~~~~~lniai~Y--gGR~EIv~A~r~l~~~v 239 (275)
+.+....+-.-+..+-+.=.| -+.++|++-.+++++.+
T Consensus 110 ~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~ 149 (315)
T 3na8_A 110 RRAQFAESLGAEAVMVLPISYWKLNEAEVFQHYRAVGEAI 149 (315)
T ss_dssp HHHHHHHHTTCSEEEECCCCSSCCCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhC
Confidence 444443333444444444434 36899999999999864
No 38
>3qxb_A Putative xylose isomerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; 1.90A {Rhodospirillum rubrum}
Probab=60.12 E-value=18 Score=31.63 Aligned_cols=67 Identities=12% Similarity=0.037 Sum_probs=43.8
Q ss_pred chhhhHHHHHHHHHHHHHcCCCeEEEEeee--cCCCCCCHHHHHHHHHHHHHhHHHHHHHhhcCCcE-EEE
Q 044091 119 GYEAGVKSLKTLVELCCKWGIRVLTVFAFS--SDNWFRPEVEVEFLMSLLESGVKEEKESFIRERIR-ISV 186 (275)
Q Consensus 119 Gh~~G~~~l~eiv~wc~~~GI~~lTvYaFS--teN~kRp~~EV~~Lm~l~~~~l~~~~~~~~~~~ir-vr~ 186 (275)
...+.++.+.+.++.|.++|++.|.+..-+ ...+. .+...+.-++.+.+.|++..+...+.||+ +-+
T Consensus 108 ~r~~~~~~~~~~i~~A~~lGa~~v~~~~g~~~~~~~~-~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~~l~l 177 (316)
T 3qxb_A 108 LQSLGYQHLKRAIDMTAAMEVPATGMPFGSYSAADAL-NPARREEIYAIARDMWIELAAYAKRQGLSMLYV 177 (316)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCEEEECCBBCCHHHHT-CHHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHHHHHHHHHHHcCCCEEEecCCCcCccccC-CcccHHHHHHHHHHHHHHHHHHHHhcCCeEEEE
Confidence 445778899999999999999999753222 11111 12223334556666676666777788998 765
No 39
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=60.12 E-value=62 Score=28.77 Aligned_cols=103 Identities=13% Similarity=-0.049 Sum_probs=73.7
Q ss_pred hhHHHHHHHHHHHHHcCCCeEEEEeeecCCCCCCHHHHHHHHHHHHHhHHHHHHHhhcCCcEEEEecCCCCCCHHHHHHH
Q 044091 122 AGVKSLKTLVELCCKWGIRVLTVFAFSSDNWFRPEVEVEFLMSLLESGVKEEKESFIRERIRISVIGDTSKLPKCLEELV 201 (275)
Q Consensus 122 ~G~~~l~eiv~wc~~~GI~~lTvYaFSteN~kRp~~EV~~Lm~l~~~~l~~~~~~~~~~~irvr~iGd~~~LP~~l~~~i 201 (275)
--.+.+.++++|..+.||.-+.+..-+.|.+.=+.+|-..+++...+.. .+ -+.|--+ ..+.+.+
T Consensus 17 iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~eEr~~v~~~~~~~~---------~g---viaGvg~---~~t~~ai 81 (293)
T 1w3i_A 17 IDKEKLKIHAENLIRKGIDKLFVNGTTGLGPSLSPEEKLENLKAVYDVT---------NK---IIFQVGG---LNLDDAI 81 (293)
T ss_dssp BCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHTTC---------SC---EEEECCC---SCHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHc---------CC---EEEecCC---CCHHHHH
Confidence 4478899999999999999999988888999999999988888665432 23 2334332 1245666
Q ss_pred HHHHHHhcCCCceEEEEEecC---CCHHHHHHHHHHHHHHH
Q 044091 202 INVVETTKNNTRFQLIVAVSY---SGQYDLVQACQRIAMKV 239 (275)
Q Consensus 202 ~~~e~~T~~~~~~~lniai~Y---gGR~EIv~A~r~l~~~v 239 (275)
+.+....+-.-+..+-+.=.| -+.++|++-.+.+++.+
T Consensus 82 ~la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~va~a~ 122 (293)
T 1w3i_A 82 RLAKLSKDFDIVGIASYAPYYYPRMSEKHLVKYFKTLCEVS 122 (293)
T ss_dssp HHHHHGGGSCCSEEEEECCCSCSSCCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHhcCCCEEEEcCCCCCCCCCHHHHHHHHHHHHhhC
Confidence 666665555555555555445 36799999999998764
No 40
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=59.93 E-value=61 Score=29.21 Aligned_cols=104 Identities=15% Similarity=0.093 Sum_probs=72.8
Q ss_pred hhHHHHHHHHHHHHHcCCCeEEEEeeecCCCCCCHHHHHHHHHHHHHhHHHHHHHhhcCCcEEEE-ecCCCCCCHHHHHH
Q 044091 122 AGVKSLKTLVELCCKWGIRVLTVFAFSSDNWFRPEVEVEFLMSLLESGVKEEKESFIRERIRISV-IGDTSKLPKCLEEL 200 (275)
Q Consensus 122 ~G~~~l~eiv~wc~~~GI~~lTvYaFSteN~kRp~~EV~~Lm~l~~~~l~~~~~~~~~~~irvr~-iGd~~~LP~~l~~~ 200 (275)
--++.+.++++|..+.||.-|.+..-+.|.+.=+.+|-..+++...+... ..+.|-+ +|. + +.+.
T Consensus 30 iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~--------grvpViaGvg~-s-----t~~a 95 (314)
T 3d0c_A 30 IDWKGLDDNVEFLLQNGIEVIVPNGNTGEFYALTIEEAKQVATRVTELVN--------GRATVVAGIGY-S-----VDTA 95 (314)
T ss_dssp BCHHHHHHHHHHHHHTTCSEECTTSGGGTGGGSCHHHHHHHHHHHHHHHT--------TSSEEEEEECS-S-----HHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEECcccCChhhCCHHHHHHHHHHHHHHhC--------CCCeEEecCCc-C-----HHHH
Confidence 44788999999999999999888878889989999999998887766442 2344332 344 3 3444
Q ss_pred HHHHHHHhcCCCceEEEEEecC--CCHHHHHHHHHHHHHHH
Q 044091 201 VINVVETTKNNTRFQLIVAVSY--SGQYDLVQACQRIAMKV 239 (275)
Q Consensus 201 i~~~e~~T~~~~~~~lniai~Y--gGR~EIv~A~r~l~~~v 239 (275)
++.+....+-..+..+-+.=.| -+.++|++-.+.+++.+
T Consensus 96 i~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~ 136 (314)
T 3d0c_A 96 IELGKSAIDSGADCVMIHQPVHPYITDAGAVEYYRNIIEAL 136 (314)
T ss_dssp HHHHHHHHHTTCSEEEECCCCCSCCCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhC
Confidence 4444444333445555554445 47899999999999864
No 41
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=59.51 E-value=67 Score=28.59 Aligned_cols=97 Identities=11% Similarity=0.115 Sum_probs=58.0
Q ss_pred HHHHHHHHcCCCeEEEEeeec-----CCCCCCHHHHHHHHHHHHHhHHHHHHHhhcCCcEEEE-----ecC--CCCC-CH
Q 044091 129 TLVELCCKWGIRVLTVFAFSS-----DNWFRPEVEVEFLMSLLESGVKEEKESFIRERIRISV-----IGD--TSKL-PK 195 (275)
Q Consensus 129 eiv~wc~~~GI~~lTvYaFSt-----eN~kRp~~EV~~Lm~l~~~~l~~~~~~~~~~~irvr~-----iGd--~~~L-P~ 195 (275)
+-++.+.+.|++.|.+|.-+. .|++++.+|.-..+.-+.+ ..++.|+.|+. .|. -..- |+
T Consensus 87 ~~i~~a~~aG~~~v~i~~~~s~~~~~~~~~~s~ee~l~~~~~~v~-------~a~~~G~~V~~~l~~~~~~e~~~~~~~~ 159 (302)
T 2ftp_A 87 KGFEAALESGVKEVAVFAAASEAFSQRNINCSIKDSLERFVPVLE-------AARQHQVRVRGYISCVLGCPYDGDVDPR 159 (302)
T ss_dssp HHHHHHHHTTCCEEEEEEESCHHHHHHHHSSCHHHHHHHHHHHHH-------HHHHTTCEEEEEEECTTCBTTTBCCCHH
T ss_pred HHHHHHHhCCcCEEEEEEecCHHHHHHHhCCCHHHHHHHHHHHHH-------HHHHCCCeEEEEEEEEeeCCcCCCCCHH
Confidence 456678889999999987554 4788898886555443333 34567888763 221 1122 34
Q ss_pred HHHHHHHHHHHHhcCCCceEEEEE--ecCCCHHHHHHHHHHHH
Q 044091 196 CLEELVINVVETTKNNTRFQLIVA--VSYSGQYDLVQACQRIA 236 (275)
Q Consensus 196 ~l~~~i~~~e~~T~~~~~~~lnia--i~YgGR~EIv~A~r~l~ 236 (275)
.+.+.++.+++.-. -.|+|| .++.-=+++.+.++.+.
T Consensus 160 ~~~~~~~~~~~~G~----d~i~l~DT~G~~~P~~~~~lv~~l~ 198 (302)
T 2ftp_A 160 QVAWVARELQQMGC----YEVSLGDTIGVGTAGATRRLIEAVA 198 (302)
T ss_dssp HHHHHHHHHHHTTC----SEEEEEESSSCCCHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHcCC----CEEEEeCCCCCcCHHHHHHHHHHHH
Confidence 55555555555422 267777 55555556666555554
No 42
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=59.43 E-value=21 Score=32.00 Aligned_cols=106 Identities=21% Similarity=0.166 Sum_probs=72.4
Q ss_pred hhHHHHHHHHHHHHHcCCCeEEEEeeecCCCCCCHHHHHHHHHHHHHhHHHHHHHhhcCCcEEEEecCCCCCCHHHHHHH
Q 044091 122 AGVKSLKTLVELCCKWGIRVLTVFAFSSDNWFRPEVEVEFLMSLLESGVKEEKESFIRERIRISVIGDTSKLPKCLEELV 201 (275)
Q Consensus 122 ~G~~~l~eiv~wc~~~GI~~lTvYaFSteN~kRp~~EV~~Lm~l~~~~l~~~~~~~~~~~irvr~iGd~~~LP~~l~~~i 201 (275)
--.+.+.++++|..+.||.-+.+..-+.|.+.=+.+|-..+++...+... ..+.|- .|-.+. .+.+.+
T Consensus 18 iD~~~l~~lv~~li~~Gv~gi~v~GttGE~~~Ls~~Er~~v~~~~~~~~~--------grvpvi-aGvg~~---~t~~ai 85 (297)
T 2rfg_A 18 VDEKALAGLVDWQIKHGAHGLVPVGTTGESPTLTEEEHKRVVALVAEQAQ--------GRVPVI-AGAGSN---NPVEAV 85 (297)
T ss_dssp ECHHHHHHHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHT--------TSSCBE-EECCCS---SHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhC--------CCCeEE-EccCCC---CHHHHH
Confidence 34688999999999999999999888889999999999999887766543 123332 233221 234444
Q ss_pred HHHHHHhcCCCceEEEEEecC--CCHHHHHHHHHHHHHHH
Q 044091 202 INVVETTKNNTRFQLIVAVSY--SGQYDLVQACQRIAMKV 239 (275)
Q Consensus 202 ~~~e~~T~~~~~~~lniai~Y--gGR~EIv~A~r~l~~~v 239 (275)
+.+....+-.-+..+-+.=.| -+.++|++-.+++++.+
T Consensus 86 ~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~ 125 (297)
T 2rfg_A 86 RYAQHAQQAGADAVLCVAGYYNRPSQEGLYQHFKMVHDAI 125 (297)
T ss_dssp HHHHHHHHHTCSEEEECCCTTTCCCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhc
Confidence 444433333444455554445 48899999999998764
No 43
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=59.13 E-value=94 Score=27.49 Aligned_cols=98 Identities=12% Similarity=0.122 Sum_probs=59.0
Q ss_pred HHHHHHcCCCeEEEEeeec-----CCCCCCHHHHHHHHHHHHHhHHHHHHHhhcCCcEEEE-----ecCC--CCC-CHHH
Q 044091 131 VELCCKWGIRVLTVFAFSS-----DNWFRPEVEVEFLMSLLESGVKEEKESFIRERIRISV-----IGDT--SKL-PKCL 197 (275)
Q Consensus 131 v~wc~~~GI~~lTvYaFSt-----eN~kRp~~EV~~Lm~l~~~~l~~~~~~~~~~~irvr~-----iGd~--~~L-P~~l 197 (275)
++.+.+.|++.+.+|.-.. .|++++.+|.-..+.-.. +...+.|..+++ +|.. ... |+.+
T Consensus 86 i~~a~~ag~~~v~i~~~~sd~~~~~~~~~~~~e~l~~~~~~i-------~~a~~~G~~v~~~l~~~~~~~~~~~~~~~~~ 158 (298)
T 2cw6_A 86 FEAAVAAGAKEVVIFGAASELFTKKNINCSIEESFQRFDAIL-------KAAQSANISVRGYVSCALGCPYEGKISPAKV 158 (298)
T ss_dssp HHHHHHTTCSEEEEEEESCHHHHHHHHSCCHHHHHHHHHHHH-------HHHHHTTCEEEEEEETTTCBTTTBSCCHHHH
T ss_pred HHHHHHCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHH-------HHHHHCCCeEEEEEEEEeeCCcCCCCCHHHH
Confidence 6667789999999987443 567888776444333222 234566777763 2211 122 4555
Q ss_pred HHHHHHHHHHhcCCCceEEEEE--ecCCCHHHHHHHHHHHHHHH
Q 044091 198 EELVINVVETTKNNTRFQLIVA--VSYSGQYDLVQACQRIAMKV 239 (275)
Q Consensus 198 ~~~i~~~e~~T~~~~~~~lnia--i~YgGR~EIv~A~r~l~~~v 239 (275)
.+.++.+++.-. -.++|+ +++..=+++.+.++.+.+.+
T Consensus 159 ~~~~~~~~~~Ga----~~i~l~DT~G~~~P~~~~~lv~~l~~~~ 198 (298)
T 2cw6_A 159 AEVTKKFYSMGC----YEISLGDTIGVGTPGIMKDMLSAVMQEV 198 (298)
T ss_dssp HHHHHHHHHTTC----SEEEEEETTSCCCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHcCC----CEEEecCCCCCcCHHHHHHHHHHHHHhC
Confidence 566666665432 256666 66777778777777776543
No 44
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=59.06 E-value=78 Score=28.78 Aligned_cols=105 Identities=11% Similarity=0.096 Sum_probs=72.5
Q ss_pred hhHHHHHHHHHHHHHcCCCeEEEEeeecCCCCCCHHHHHHHHHHHHHhHHHHHHHhhcCCcEEEE-ecCCCCCCHHHHHH
Q 044091 122 AGVKSLKTLVELCCKWGIRVLTVFAFSSDNWFRPEVEVEFLMSLLESGVKEEKESFIRERIRISV-IGDTSKLPKCLEEL 200 (275)
Q Consensus 122 ~G~~~l~eiv~wc~~~GI~~lTvYaFSteN~kRp~~EV~~Lm~l~~~~l~~~~~~~~~~~irvr~-iGd~~~LP~~l~~~ 200 (275)
--++.+.++++|..+.||.-|.+..-+.|.+.=+.+|-..+++...+... ..+.|-+ +|..+ -.+..+.
T Consensus 52 iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~--------grvpViaGvg~~s--t~eai~l 121 (332)
T 2r8w_A 52 VDIEAFSALIARLDAAEVDSVGILGSTGIYMYLTREERRRAIEAAATILR--------GRRTLMAGIGALR--TDEAVAL 121 (332)
T ss_dssp BCHHHHHHHHHHHHHHTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHT--------TSSEEEEEECCSS--HHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhC--------CCCcEEEecCCCC--HHHHHHH
Confidence 44788999999999999999999888889999999999998887766542 2344432 34332 2333444
Q ss_pred HHHHHHHhcCCCceEEEEEecC--CCHHHHHHHHHHHHHHH
Q 044091 201 VINVVETTKNNTRFQLIVAVSY--SGQYDLVQACQRIAMKV 239 (275)
Q Consensus 201 i~~~e~~T~~~~~~~lniai~Y--gGR~EIv~A~r~l~~~v 239 (275)
.+.+++. .-+..+.+.=.| -+.++|++-.+.+++.+
T Consensus 122 a~~A~~~---Gadavlv~~P~Y~~~s~~~l~~~f~~VA~a~ 159 (332)
T 2r8w_A 122 AKDAEAA---GADALLLAPVSYTPLTQEEAYHHFAAVAGAT 159 (332)
T ss_dssp HHHHHHH---TCSEEEECCCCSSCCCHHHHHHHHHHHHHHC
T ss_pred HHHHHhc---CCCEEEECCCCCCCCCHHHHHHHHHHHHHhc
Confidence 4444443 344444444444 37899999999999864
No 45
>3u0h_A Xylose isomerase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM barrel; 2.30A {Alicyclobacillus acidocaldarius subsp}
Probab=58.80 E-value=32 Score=28.96 Aligned_cols=63 Identities=19% Similarity=0.326 Sum_probs=43.0
Q ss_pred hhhhHHHHHHHHHHHHHcCCCeEEEEeeecCCCCCCHHHHHHHHHHHHHhHHHHHHHhhcCCcEEEEe
Q 044091 120 YEAGVKSLKTLVELCCKWGIRVLTVFAFSSDNWFRPEVEVEFLMSLLESGVKEEKESFIRERIRISVI 187 (275)
Q Consensus 120 h~~G~~~l~eiv~wc~~~GI~~lTvYaFSteN~kRp~~EV~~Lm~l~~~~l~~~~~~~~~~~irvr~i 187 (275)
.++.++.+.+.++.|.++|++.|.+...... .++.++ -++.+.+.|.+..+...+.||++-+-
T Consensus 79 ~~~~~~~~~~~i~~A~~lG~~~v~~~~~p~~--~~~~~~---~~~~~~~~l~~l~~~a~~~Gv~l~lE 141 (281)
T 3u0h_A 79 FLRELSLLPDRARLCARLGARSVTAFLWPSM--DEEPVR---YISQLARRIRQVAVELLPLGMRVGLE 141 (281)
T ss_dssp HHHHHHTHHHHHHHHHHTTCCEEEEECCSEE--SSCHHH---HHHHHHHHHHHHHHHHGGGTCEEEEE
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEEeecCCC--CCcchh---hHHHHHHHHHHHHHHHHHcCCEEEEE
Confidence 4566788999999999999999996543221 233332 33445555666666677889998775
No 46
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=58.78 E-value=80 Score=28.34 Aligned_cols=122 Identities=12% Similarity=0.125 Sum_probs=80.3
Q ss_pred hhHHHHHHHHHHHHHcCCCeEEEEeeecCCCCCCHHHHHHHHHHHHHhHHHHHHHhhcCCcEEEE-ecCCCCCCHHHHHH
Q 044091 122 AGVKSLKTLVELCCKWGIRVLTVFAFSSDNWFRPEVEVEFLMSLLESGVKEEKESFIRERIRISV-IGDTSKLPKCLEEL 200 (275)
Q Consensus 122 ~G~~~l~eiv~wc~~~GI~~lTvYaFSteN~kRp~~EV~~Lm~l~~~~l~~~~~~~~~~~irvr~-iGd~~~LP~~l~~~ 200 (275)
--.+.+.++++|..+.||.-|.+..-+.|...=+.+|...+++...+... ..+.|-+ +|..+ +.+.
T Consensus 26 iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~--------grvpviaGvg~~~-----t~~a 92 (309)
T 3fkr_A 26 LDLASQKRAVDFMIDAGSDGLCILANFSEQFAITDDERDVLTRTILEHVA--------GRVPVIVTTSHYS-----TQVC 92 (309)
T ss_dssp BCHHHHHHHHHHHHHTTCSCEEESSGGGTGGGSCHHHHHHHHHHHHHHHT--------TSSCEEEECCCSS-----HHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECccccCcccCCHHHHHHHHHHHHHHhC--------CCCcEEEecCCch-----HHHH
Confidence 44788999999999999999999988889999999999998887665432 2344422 34332 3444
Q ss_pred HHHHHHHhcCCCceEEEEEecC-----CCHHHHHHHHHHHHHHHhcCC------CCCCCCCHHHHHh
Q 044091 201 VINVVETTKNNTRFQLIVAVSY-----SGQYDLVQACQRIAMKVKDGL------IEPNDVSESLIEQ 256 (275)
Q Consensus 201 i~~~e~~T~~~~~~~lniai~Y-----gGR~EIv~A~r~l~~~v~~g~------l~~edI~e~~i~~ 256 (275)
++.+....+-.-+..+.+.=-| -+.++|++-.+.+++.+.--- .+--+++.+++.+
T Consensus 93 i~la~~A~~~Gadavlv~~Pyy~~~~~~s~~~l~~~f~~va~a~~lPiilYn~P~tg~~l~~~~~~~ 159 (309)
T 3fkr_A 93 AARSLRAQQLGAAMVMAMPPYHGATFRVPEAQIFEFYARVSDAIAIPIMVQDAPASGTALSAPFLAR 159 (309)
T ss_dssp HHHHHHHHHTTCSEEEECCSCBTTTBCCCHHHHHHHHHHHHHHCSSCEEEEECGGGCCCCCHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEcCCCCccCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCCCHHHHHH
Confidence 4444444344445555554334 278999999999998742100 0123567776654
No 47
>2ksn_A Ubiquitin domain-containing protein 2; UBTD2, DC-UBP, signaling protein; NMR {Homo sapiens}
Probab=58.36 E-value=8.9 Score=31.41 Aligned_cols=24 Identities=13% Similarity=0.200 Sum_probs=19.9
Q ss_pred ecCCCHHHHHHHHHHHHHHHhcCC
Q 044091 220 VSYSGQYDLVQACQRIAMKVKDGL 243 (275)
Q Consensus 220 i~YgGR~EIv~A~r~l~~~v~~g~ 243 (275)
-.||||.||=+|.|..++.++.|.
T Consensus 50 p~~~Gr~EIW~ALraA~~~~e~~D 73 (137)
T 2ksn_A 50 PAFEGRKEIWDALKAAAHAFESND 73 (137)
T ss_dssp STTCCCHHHHHHHHHHHHHHHTTC
T ss_pred CccCCCHHHHHHHHHHHHHHhcCC
Confidence 359999999999999987766653
No 48
>3aam_A Endonuclease IV, endoiv; DNA repair, base excision repair, BER, TIM barrel, endonucle hydrolase, structural genomics, NPPSFA; 1.58A {Thermus thermophilus}
Probab=58.25 E-value=83 Score=26.42 Aligned_cols=103 Identities=14% Similarity=0.056 Sum_probs=54.1
Q ss_pred HHHHHHHHHHHcCCCeEEEEeeecCCCCCC---HHHHHHHHHHHHHhHHHHHHHhhcCCc-EEEEecC----CCCCCHHH
Q 044091 126 SLKTLVELCCKWGIRVLTVFAFSSDNWFRP---EVEVEFLMSLLESGVKEEKESFIRERI-RISVIGD----TSKLPKCL 197 (275)
Q Consensus 126 ~l~eiv~wc~~~GI~~lTvYaFSteN~kRp---~~EV~~Lm~l~~~~l~~~~~~~~~~~i-rvr~iGd----~~~LP~~l 197 (275)
.+.+.++++.++|+..+=+|..+...|..+ .++++.+.++ +.+.|+ .+-+.+. +.. .++.
T Consensus 15 ~~~~~~~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~gl~~~~~h~~~~~~l~s-~~~~ 82 (270)
T 3aam_A 15 GVAGAVEEATALGLTAFQIFAKSPRSWRPRALSPAEVEAFRAL-----------REASGGLPAVIHASYLVNLGA-EGEL 82 (270)
T ss_dssp HHHHHHHHHHHHTCSCEEEESSCTTCCSCCCCCHHHHHHHHHH-----------HHHTTCCCEEEECCTTCCTTC-SSTH
T ss_pred cHHHHHHHHHHcCCCEEEEeCCCCCcCcCCCCCHHHHHHHHHH-----------HHHcCCceEEEecCcccCCCC-CHHH
Confidence 577888888899999888876655556543 3444443332 344566 5544442 211 2222
Q ss_pred H----HHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHHHh
Q 044091 198 E----ELVINVVETTKNNTRFQLIVAVSYSGQYDLVQACQRIAMKVK 240 (275)
Q Consensus 198 ~----~~i~~~e~~T~~~~~~~lniai~YgGR~EIv~A~r~l~~~v~ 240 (275)
+ +.+...-+..+.-..-.+++..++.|.+.++++.+++++..+
T Consensus 83 r~~~~~~~~~~i~~a~~lGa~~vv~h~g~~~~~~~~~~l~~l~~~a~ 129 (270)
T 3aam_A 83 WEKSVASLADDLEKAALLGVEYVVVHPGSGRPERVKEGALKALRLAG 129 (270)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCEEEECCCBSCHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEECCCCCCHHHHHHHHHHHHHhhc
Confidence 1 222222222221111234444444466777788888877664
No 49
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=57.90 E-value=38 Score=30.71 Aligned_cols=106 Identities=20% Similarity=0.176 Sum_probs=73.1
Q ss_pred hhHHHHHHHHHHHHHcCCCeEEEEeeecCCCCCCHHHHHHHHHHHHHhHHHHHHHhhcCCcEEEEecCCCCCCHHHHHHH
Q 044091 122 AGVKSLKTLVELCCKWGIRVLTVFAFSSDNWFRPEVEVEFLMSLLESGVKEEKESFIRERIRISVIGDTSKLPKCLEELV 201 (275)
Q Consensus 122 ~G~~~l~eiv~wc~~~GI~~lTvYaFSteN~kRp~~EV~~Lm~l~~~~l~~~~~~~~~~~irvr~iGd~~~LP~~l~~~i 201 (275)
--++.+.++++|..+.||.-|.+..-+.|.+.=+.+|...+++...+... ..+.|- .|--+. .+.+.+
T Consensus 40 iD~~~l~~li~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~--------grvpVi-aGvg~~---st~~ai 107 (315)
T 3si9_A 40 IDEKAFCNFVEWQITQGINGVSPVGTTGESPTLTHEEHKRIIELCVEQVA--------KRVPVV-AGAGSN---STSEAV 107 (315)
T ss_dssp BCHHHHHHHHHHHHHTTCSEEECSSTTTTGGGSCHHHHHHHHHHHHHHHT--------TSSCBE-EECCCS---SHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEeCccccCccccCHHHHHHHHHHHHHHhC--------CCCcEE-EeCCCC---CHHHHH
Confidence 44788999999999999999999888889988899999999887776543 123332 233222 234444
Q ss_pred HHHHHHhcCCCceEEEEEecC--CCHHHHHHHHHHHHHHH
Q 044091 202 INVVETTKNNTRFQLIVAVSY--SGQYDLVQACQRIAMKV 239 (275)
Q Consensus 202 ~~~e~~T~~~~~~~lniai~Y--gGR~EIv~A~r~l~~~v 239 (275)
+.+....+-..+..+-+.=.| -+.++|++-.+.+++.+
T Consensus 108 ~la~~A~~~Gadavlv~~P~y~~~~~~~l~~~f~~va~a~ 147 (315)
T 3si9_A 108 ELAKHAEKAGADAVLVVTPYYNRPNQRGLYTHFSSIAKAI 147 (315)
T ss_dssp HHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHcC
Confidence 444444343445455554444 47889999999999874
No 50
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=57.77 E-value=1.1e+02 Score=27.58 Aligned_cols=106 Identities=20% Similarity=0.166 Sum_probs=72.9
Q ss_pred hhHHHHHHHHHHHHHcCCCeEEEEeeecCCCCCCHHHHHHHHHHHHHhHHHHHHHhhcCCcEEEEecCCCCCCHHHHHHH
Q 044091 122 AGVKSLKTLVELCCKWGIRVLTVFAFSSDNWFRPEVEVEFLMSLLESGVKEEKESFIRERIRISVIGDTSKLPKCLEELV 201 (275)
Q Consensus 122 ~G~~~l~eiv~wc~~~GI~~lTvYaFSteN~kRp~~EV~~Lm~l~~~~l~~~~~~~~~~~irvr~iGd~~~LP~~l~~~i 201 (275)
--++.+.++++|..+.||.-+.+..-+.|.+.=+.+|...+++...+... ..+.|- +|--+. .+.+.+
T Consensus 41 iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~--------grvpVi-aGvg~~---st~eai 108 (314)
T 3qze_A 41 LDWDSLAKLVDFHLQEGTNAIVAVGTTGESATLDVEEHIQVIRRVVDQVK--------GRIPVI-AGTGAN---STREAV 108 (314)
T ss_dssp BCHHHHHHHHHHHHHHTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHT--------TSSCEE-EECCCS---SHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhC--------CCCcEE-EeCCCc---CHHHHH
Confidence 34788999999999999999999888889999999999999887766542 223432 243322 234444
Q ss_pred HHHHHHhcCCCceEEEEEecC--CCHHHHHHHHHHHHHHH
Q 044091 202 INVVETTKNNTRFQLIVAVSY--SGQYDLVQACQRIAMKV 239 (275)
Q Consensus 202 ~~~e~~T~~~~~~~lniai~Y--gGR~EIv~A~r~l~~~v 239 (275)
+.+....+-..+..+-+.=.| -+.+++++-.+++++.+
T Consensus 109 ~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~ 148 (314)
T 3qze_A 109 ALTEAAKSGGADACLLVTPYYNKPTQEGMYQHFRHIAEAV 148 (314)
T ss_dssp HHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhc
Confidence 444443333445455554334 46789999999999864
No 51
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=57.67 E-value=74 Score=28.73 Aligned_cols=106 Identities=10% Similarity=0.156 Sum_probs=73.1
Q ss_pred hhHHHHHHHHHHHHHcCCCeEEEEeeecCCCCCCHHHHHHHHHHHHHhHHHHHHHhhcCCcEEEEecCCCCCCHHHHHHH
Q 044091 122 AGVKSLKTLVELCCKWGIRVLTVFAFSSDNWFRPEVEVEFLMSLLESGVKEEKESFIRERIRISVIGDTSKLPKCLEELV 201 (275)
Q Consensus 122 ~G~~~l~eiv~wc~~~GI~~lTvYaFSteN~kRp~~EV~~Lm~l~~~~l~~~~~~~~~~~irvr~iGd~~~LP~~l~~~i 201 (275)
--++.+.++++|..+.||.-|.+..-+.|.+.=+.+|...+++...+... ..+.|- .|--+.=-.+..+..
T Consensus 29 iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~--------grvpvi-aGvg~~~t~~ai~la 99 (318)
T 3qfe_A 29 LDLASQERYYAYLARSGLTGLVILGTNAEAFLLTREERAQLIATARKAVG--------PDFPIM-AGVGAHSTRQVLEHI 99 (318)
T ss_dssp ECHHHHHHHHHHHHTTTCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHC--------TTSCEE-EECCCSSHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhC--------CCCcEE-EeCCCCCHHHHHHHH
Confidence 44788999999999999999999998899999999999998887766442 234442 243322233344444
Q ss_pred HHHHHHhcCCCceEEEEEecC----CCHHHHHHHHHHHHHHH
Q 044091 202 INVVETTKNNTRFQLIVAVSY----SGQYDLVQACQRIAMKV 239 (275)
Q Consensus 202 ~~~e~~T~~~~~~~lniai~Y----gGR~EIv~A~r~l~~~v 239 (275)
+.+++. .-+..+.+.=.| .+.++|++-.+.+++.+
T Consensus 100 ~~a~~~---Gadavlv~~P~y~~kp~~~~~l~~~f~~ia~a~ 138 (318)
T 3qfe_A 100 NDASVA---GANYVLVLPPAYFGKATTPPVIKSFFDDVSCQS 138 (318)
T ss_dssp HHHHHH---TCSEEEECCCCC---CCCHHHHHHHHHHHHHHC
T ss_pred HHHHHc---CCCEEEEeCCcccCCCCCHHHHHHHHHHHHhhC
Confidence 444443 344444454435 25789999999999864
No 52
>2q02_A Putative cytoplasmic protein; structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; 2.40A {Salmonella typhimurium LT2} SCOP: c.1.15.4
Probab=57.49 E-value=83 Score=26.20 Aligned_cols=20 Identities=5% Similarity=0.154 Sum_probs=14.8
Q ss_pred HHHHHHHHHHcCCCeEEEEe
Q 044091 127 LKTLVELCCKWGIRVLTVFA 146 (275)
Q Consensus 127 l~eiv~wc~~~GI~~lTvYa 146 (275)
+.+.++.+.++|.+.|-++.
T Consensus 21 ~~~~l~~~~~~G~~~vEl~~ 40 (272)
T 2q02_A 21 IEAFFRLVKRLEFNKVELRN 40 (272)
T ss_dssp HHHHHHHHHHTTCCEEEEET
T ss_pred HHHHHHHHHHcCCCEEEeec
Confidence 56777777788888877764
No 53
>3q71_A Poly [ADP-ribose] polymerase 14; structural genomics, structural genomics consortium, SGC, transferase, PARP14 macro 2; HET: AR6; 2.20A {Homo sapiens}
Probab=57.16 E-value=96 Score=26.84 Aligned_cols=39 Identities=13% Similarity=0.154 Sum_probs=33.1
Q ss_pred HHHHHHHHHHHHcCCCeEEEEeeecCCCCCCHHHHHHHH
Q 044091 125 KSLKTLVELCCKWGIRVLTVFAFSSDNWFRPEVEVEFLM 163 (275)
Q Consensus 125 ~~l~eiv~wc~~~GI~~lTvYaFSteN~kRp~~EV~~Lm 163 (275)
+...+.++.|.+.|++.|.|=+.|+.++.=|.++...+|
T Consensus 135 ~~y~~~L~~A~e~~i~SIAfPaIsTG~~G~P~~~aA~i~ 173 (221)
T 3q71_A 135 DIIRECMEITESLSLKSIAFPAIGTGNLGFPKNIFAELI 173 (221)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECTTSSTTCCCHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCceEeeccccCCCCCCCHHHHHHHH
Confidence 445556777888999999999999999999999988765
No 54
>3obe_A Sugar phosphate isomerase/epimerase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=56.76 E-value=36 Score=29.91 Aligned_cols=59 Identities=8% Similarity=0.050 Sum_probs=40.6
Q ss_pred hhhHHHHHHHHHHHHHcCCCeEEEEeeecCCCCCCHHHHHHHHHHHHHhHHHHHHHhhcCCcEEEE
Q 044091 121 EAGVKSLKTLVELCCKWGIRVLTVFAFSSDNWFRPEVEVEFLMSLLESGVKEEKESFIRERIRISV 186 (275)
Q Consensus 121 ~~G~~~l~eiv~wc~~~GI~~lTvYaFSteN~kRp~~EV~~Lm~l~~~~l~~~~~~~~~~~irvr~ 186 (275)
....+.+.+.++.|.++|++.|.+-.. .. ....++. +.+.+.|++..+...++||++-+
T Consensus 110 ~~~~~~~~~~i~~A~~lG~~~v~~~~~-~~--~~~~~~~----~~~~~~l~~l~~~a~~~Gv~l~l 168 (305)
T 3obe_A 110 PKFDEFWKKATDIHAELGVSCMVQPSL-PR--IENEDDA----KVVSEIFNRAGEITKKAGILWGY 168 (305)
T ss_dssp HHHHHHHHHHHHHHHHHTCSEEEECCC-CC--CSSHHHH----HHHHHHHHHHHHHHHTTTCEEEE
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEeCCC-CC--CCCHHHH----HHHHHHHHHHHHHHHHcCCEEEE
Confidence 456788999999999999999997322 11 1223332 44555666666677888999876
No 55
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=55.84 E-value=1.1e+02 Score=27.54 Aligned_cols=107 Identities=9% Similarity=0.088 Sum_probs=72.4
Q ss_pred hhHHHHHHHHHHHHHcCCCeEEEEeeecCCCCCCHHHHHHHHHHHHHhHHHHHHHhhcCCcEEEEecCCCCCCHHHHHHH
Q 044091 122 AGVKSLKTLVELCCKWGIRVLTVFAFSSDNWFRPEVEVEFLMSLLESGVKEEKESFIRERIRISVIGDTSKLPKCLEELV 201 (275)
Q Consensus 122 ~G~~~l~eiv~wc~~~GI~~lTvYaFSteN~kRp~~EV~~Lm~l~~~~l~~~~~~~~~~~irvr~iGd~~~LP~~l~~~i 201 (275)
--++.+.++++|..+.||.-|.+..-+.|.+.=+.+|-..+++...+.. ..+.|- .|-.+.=-.+..+..
T Consensus 26 iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Lt~~Er~~v~~~~v~~~---------grvpVi-aGvg~~~t~~ai~la 95 (313)
T 3dz1_A 26 IDDVSIDRLTDFYAEVGCEGVTVLGILGEAPKLDAAEAEAVATRFIKRA---------KSMQVI-VGVSAPGFAAMRRLA 95 (313)
T ss_dssp BCHHHHHHHHHHHHHTTCSEEEESTGGGTGGGSCHHHHHHHHHHHHHHC---------TTSEEE-EECCCSSHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHCCCCEEEeCccCcChhhCCHHHHHHHHHHHHHHc---------CCCcEE-EecCCCCHHHHHHHH
Confidence 4478899999999999999999988888999999999999888765532 234443 344332233444444
Q ss_pred HHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHHHh
Q 044091 202 INVVETTKNNTRFQLIVAVSYSGQYDLVQACQRIAMKVK 240 (275)
Q Consensus 202 ~~~e~~T~~~~~~~lniai~YgGR~EIv~A~r~l~~~v~ 240 (275)
+.+++. +-+.+.+.--..+-+.++|++-.+.+++.+.
T Consensus 96 ~~A~~~--Gadavlv~~P~~~~s~~~l~~~f~~va~a~~ 132 (313)
T 3dz1_A 96 RLSMDA--GAAGVMIAPPPSLRTDEQITTYFRQATEAIG 132 (313)
T ss_dssp HHHHHH--TCSEEEECCCTTCCSHHHHHHHHHHHHHHHC
T ss_pred HHHHHc--CCCEEEECCCCCCCCHHHHHHHHHHHHHhCC
Confidence 555543 2333322212234578999999999998764
No 56
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=55.31 E-value=1.1e+02 Score=27.08 Aligned_cols=106 Identities=15% Similarity=0.157 Sum_probs=73.7
Q ss_pred hhHHHHHHHHHHHHHcCCCeEEEEeeecCCCCCCHHHHHHHHHHHHHhHHHHHHHhhcCCcEEEEecCCCCCCHHHHHHH
Q 044091 122 AGVKSLKTLVELCCKWGIRVLTVFAFSSDNWFRPEVEVEFLMSLLESGVKEEKESFIRERIRISVIGDTSKLPKCLEELV 201 (275)
Q Consensus 122 ~G~~~l~eiv~wc~~~GI~~lTvYaFSteN~kRp~~EV~~Lm~l~~~~l~~~~~~~~~~~irvr~iGd~~~LP~~l~~~i 201 (275)
--++.+.++++|..+.||.-+.+..-+.|.+.=+.+|...+++...+... ..+.|- .|--+. .+.+.+
T Consensus 25 iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~--------grvpvi-aGvg~~---~t~~ai 92 (297)
T 3flu_A 25 IHYEQLRDLIDWHIENGTDGIVAVGTTGESATLSVEEHTAVIEAVVKHVA--------KRVPVI-AGTGAN---NTVEAI 92 (297)
T ss_dssp BCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHT--------TSSCEE-EECCCS---SHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhC--------CCCcEE-EeCCCc---CHHHHH
Confidence 44788999999999999999999998899999999999998887766543 223332 243322 234444
Q ss_pred HHHHHHhcCCCceEEEEEecC--CCHHHHHHHHHHHHHHH
Q 044091 202 INVVETTKNNTRFQLIVAVSY--SGQYDLVQACQRIAMKV 239 (275)
Q Consensus 202 ~~~e~~T~~~~~~~lniai~Y--gGR~EIv~A~r~l~~~v 239 (275)
+.+....+-..+..+-+.=.| -+.+++++-.+.+++.+
T Consensus 93 ~la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~va~a~ 132 (297)
T 3flu_A 93 ALSQAAEKAGADYTLSVVPYYNKPSQEGIYQHFKTIAEAT 132 (297)
T ss_dssp HHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhC
Confidence 444444444445555554444 46889999999999864
No 57
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=54.31 E-value=59 Score=28.84 Aligned_cols=103 Identities=16% Similarity=-0.018 Sum_probs=72.4
Q ss_pred hhHHHHHHHHHHHHHcCCCeEEEEeeecCCCCCCHHHHHHHHHHHHHhHHHHHHHhhcCCcEEEEecCCCCCCHHHHHHH
Q 044091 122 AGVKSLKTLVELCCKWGIRVLTVFAFSSDNWFRPEVEVEFLMSLLESGVKEEKESFIRERIRISVIGDTSKLPKCLEELV 201 (275)
Q Consensus 122 ~G~~~l~eiv~wc~~~GI~~lTvYaFSteN~kRp~~EV~~Lm~l~~~~l~~~~~~~~~~~irvr~iGd~~~LP~~l~~~i 201 (275)
--.+.+.++++|..+.||.-+.+..-+.|.+.=+.+|...+++...+.. .| -+.|-.+. .+.+.+
T Consensus 17 iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~---------~g---ViaGvg~~---~t~~ai 81 (288)
T 2nuw_A 17 VNVDALKTHAKNLLEKGIDAIFVNGTTGLGPALSKDEKRQNLNALYDVT---------HK---LIFQVGSL---NLNDVM 81 (288)
T ss_dssp BCHHHHHHHHHHHHHTTCCEEEETSTTTTGGGSCHHHHHHHHHHHTTTC---------SC---EEEECCCS---CHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHh---------CC---eEEeeCCC---CHHHHH
Confidence 4478899999999999999999988888999999999988887655432 23 23343321 245555
Q ss_pred HHHHHHhcCCCceEEEEEecC---CCHHHHHHHHHHHHHHH
Q 044091 202 INVVETTKNNTRFQLIVAVSY---SGQYDLVQACQRIAMKV 239 (275)
Q Consensus 202 ~~~e~~T~~~~~~~lniai~Y---gGR~EIv~A~r~l~~~v 239 (275)
+.+....+-.-+..+-+.=.| -+.++|++-.+++++.+
T Consensus 82 ~la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~va~a~ 122 (288)
T 2nuw_A 82 ELVKFSNEMDILGVSSHSPYYFPRLPEKFLAKYYEEIARIS 122 (288)
T ss_dssp HHHHHHHTSCCSEEEECCCCSSCSCCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHhcCCCEEEEcCCcCCCCCCHHHHHHHHHHHHHhc
Confidence 555555444555555554444 36799999999998764
No 58
>3ayv_A Putative uncharacterized protein TTHB071; structural genomics, riken structural genomics/proteomics in RSGI, TIM barrel, unknown function; 1.85A {Thermus thermophilus} PDB: 3ayt_A
Probab=54.28 E-value=91 Score=25.88 Aligned_cols=68 Identities=9% Similarity=-0.101 Sum_probs=43.2
Q ss_pred chhhhHHHHHHHHHHHHHcCCCeEEEEeeecCCCCCCHHHHHHHHHHHHHhHHHHHHHhhcCCcEEEEec
Q 044091 119 GYEAGVKSLKTLVELCCKWGIRVLTVFAFSSDNWFRPEVEVEFLMSLLESGVKEEKESFIRERIRISVIG 188 (275)
Q Consensus 119 Gh~~G~~~l~eiv~wc~~~GI~~lTvYaFSteN~kRp~~EV~~Lm~l~~~~l~~~~~~~~~~~irvr~iG 188 (275)
-.....+.+.+.++.|..+|++.+.+..-... ...+ ...+.-++.+.+.+++..+...+.|+++-+--
T Consensus 70 ~r~~~~~~~~~~i~~A~~lGa~~v~~~~g~~~-~~~~-~~~~~~~~~~~~~l~~l~~~a~~~gv~l~lEn 137 (254)
T 3ayv_A 70 VRGLTLRRLLFGLDRAAELGADRAVFHSGIPH-GRTP-EEALERALPLAEALGLVVRRARTLGVRLLLEN 137 (254)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCSEEEEECCCCT-TCCH-HHHHHTHHHHHHHTHHHHHHHHHHTCEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHhCCCEEEECCCCCc-cccc-ccHHHHHHHHHHHHHHHHHHHhhcCCEEEEcC
Confidence 34567889999999999999999988643221 1111 11222334455555555566667788887743
No 59
>3tva_A Xylose isomerase domain protein TIM barrel; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.15A {Planctomyces limnophilus}
Probab=54.16 E-value=40 Score=28.74 Aligned_cols=66 Identities=9% Similarity=0.072 Sum_probs=44.9
Q ss_pred CcchhhhHHHHHHHHHHHHHcCCCeEEEEe-eecCCCCCCHHHHHHHHHHHHHhHHHHHHHhhcCCcEEEEecC
Q 044091 117 GSGYEAGVKSLKTLVELCCKWGIRVLTVFA-FSSDNWFRPEVEVEFLMSLLESGVKEEKESFIRERIRISVIGD 189 (275)
Q Consensus 117 ~~Gh~~G~~~l~eiv~wc~~~GI~~lTvYa-FSteN~kRp~~EV~~Lm~l~~~~l~~~~~~~~~~~irvr~iGd 189 (275)
.+...+..+.+.+.++.|.++|++.|.+.. +..++ ..+. .+.+.+.|++..+...++||++-+--.
T Consensus 94 ~~~r~~~~~~~~~~i~~a~~lG~~~v~~~~G~~~~~---~~~~----~~~~~~~l~~l~~~a~~~Gv~l~lE~~ 160 (290)
T 3tva_A 94 LETRASRVAEMKEISDFASWVGCPAIGLHIGFVPES---SSPD----YSELVRVTQDLLTHAANHGQAVHLETG 160 (290)
T ss_dssp TTTHHHHHHHHHHHHHHHHHHTCSEEEECCCCCCCT---TSHH----HHHHHHHHHHHHHHHHTTTCEEEEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCEEEEcCCCCccc---chHH----HHHHHHHHHHHHHHHHHcCCEEEEecC
Confidence 344567789999999999999999999854 22222 2222 334445555556667788999877543
No 60
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=53.96 E-value=47 Score=29.49 Aligned_cols=105 Identities=16% Similarity=0.133 Sum_probs=72.5
Q ss_pred hhHHHHHHHHHHHHHcCCCeEEEEeeecCCCCCCHHHHHHHHHHHHHhHHHHHHHhhcCCcEEEEecCCCCCCHHHHHHH
Q 044091 122 AGVKSLKTLVELCCKWGIRVLTVFAFSSDNWFRPEVEVEFLMSLLESGVKEEKESFIRERIRISVIGDTSKLPKCLEELV 201 (275)
Q Consensus 122 ~G~~~l~eiv~wc~~~GI~~lTvYaFSteN~kRp~~EV~~Lm~l~~~~l~~~~~~~~~~~irvr~iGd~~~LP~~l~~~i 201 (275)
--.+.+.++++|..+.||.-+.+..-+.|.+.=+.+|-..+++...+... ..+.|- .|--+. .+.+.+
T Consensus 19 iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~--------gr~pvi-~Gvg~~---~t~~ai 86 (291)
T 3a5f_A 19 VDFDKLSELIEWHIKSKTDAIIVCGTTGEATTMTETERKETIKFVIDKVN--------KRIPVI-AGTGSN---NTAASI 86 (291)
T ss_dssp BCHHHHHHHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHT--------TSSCEE-EECCCS---SHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhC--------CCCcEE-EeCCcc---cHHHHH
Confidence 55788999999999999999999888889999999999998887766542 123332 233221 234555
Q ss_pred HHHHHHhcCCCceEEEEEecC--CCHHHHHHHHHHHHHH
Q 044091 202 INVVETTKNNTRFQLIVAVSY--SGQYDLVQACQRIAMK 238 (275)
Q Consensus 202 ~~~e~~T~~~~~~~lniai~Y--gGR~EIv~A~r~l~~~ 238 (275)
+.+....+-.-+..+-+.=.| -+.++|.+-.+++++.
T Consensus 87 ~la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~ia~a 125 (291)
T 3a5f_A 87 AMSKWAESIGVDGLLVITPYYNKTTQKGLVKHFKAVSDA 125 (291)
T ss_dssp HHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHC-CTGGG
T ss_pred HHHHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHh
Confidence 555544444555555555555 4889999998888764
No 61
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=53.29 E-value=30 Score=31.31 Aligned_cols=121 Identities=13% Similarity=0.022 Sum_probs=77.7
Q ss_pred hhHHHHHHHHHHHHHcCCCeEEEEeeecCCCCCCHHHHHHHHHHHHHhHHHHHHHhhcCCcEEEE-ecCCCCCCHHHHHH
Q 044091 122 AGVKSLKTLVELCCKWGIRVLTVFAFSSDNWFRPEVEVEFLMSLLESGVKEEKESFIRERIRISV-IGDTSKLPKCLEEL 200 (275)
Q Consensus 122 ~G~~~l~eiv~wc~~~GI~~lTvYaFSteN~kRp~~EV~~Lm~l~~~~l~~~~~~~~~~~irvr~-iGd~~~LP~~l~~~ 200 (275)
--++.+.++++|..+.||.-|.+-.-+.|.+.=+.+|-..+++...+... ..+.|-+ +|. + -.+..+.
T Consensus 30 iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~v~~~~--------grvpViaGvg~-~--t~~ai~l 98 (316)
T 3e96_A 30 IDWHHYKETVDRIVDNGIDVIVPCGNTSEFYALSLEEAKEEVRRTVEYVH--------GRALVVAGIGY-A--TSTAIEL 98 (316)
T ss_dssp BCHHHHHHHHHHHHTTTCCEECTTSGGGTGGGSCHHHHHHHHHHHHHHHT--------TSSEEEEEECS-S--HHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhC--------CCCcEEEEeCc-C--HHHHHHH
Confidence 44788999999999999999988888889999999999998887766543 2344322 342 2 2333344
Q ss_pred HHHHHHHhcCCCceEEEEEecC--CCHHHHHHHHHHHHHHHhcCCCC---CCCCCHHHHHh
Q 044091 201 VINVVETTKNNTRFQLIVAVSY--SGQYDLVQACQRIAMKVKDGLIE---PNDVSESLIEQ 256 (275)
Q Consensus 201 i~~~e~~T~~~~~~~lniai~Y--gGR~EIv~A~r~l~~~v~~g~l~---~edI~e~~i~~ 256 (275)
.+.+++. ..+..+.+.=-| -+.++|++-.+.+++.+.---+- .-+++.+++.+
T Consensus 99 a~~A~~~---Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~g~~l~~~~~~~ 156 (316)
T 3e96_A 99 GNAAKAA---GADAVMIHMPIHPYVTAGGVYAYFRDIIEALDFPSLVYFKDPEISDRVLVD 156 (316)
T ss_dssp HHHHHHH---TCSEEEECCCCCSCCCHHHHHHHHHHHHHHHTSCEEEEECCTTSCTHHHHH
T ss_pred HHHHHhc---CCCEEEEcCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEeCCCCCCHHHHHH
Confidence 4444443 334344332223 37899999999999875311000 23566666654
No 62
>3oqv_A ALBC; rossman fold, cyclodipeptide synthase, aminoacyl-tRNA, prote binding; 1.90A {Streptomyces noursei}
Probab=52.34 E-value=22 Score=31.81 Aligned_cols=117 Identities=10% Similarity=0.072 Sum_probs=77.1
Q ss_pred hHHHHHHHHHHHHHcCCCeEEEEeeec--------------CCCCCCHHHHHHHHHHHHHhHHHHHHHhhcCCcEEEEec
Q 044091 123 GVKSLKTLVELCCKWGIRVLTVFAFSS--------------DNWFRPEVEVEFLMSLLESGVKEEKESFIRERIRISVIG 188 (275)
Q Consensus 123 G~~~l~eiv~wc~~~GI~~lTvYaFSt--------------eN~kRp~~EV~~Lm~l~~~~l~~~~~~~~~~~irvr~iG 188 (275)
.-+.+.++++|+ ..+.+.+.|..-.+ +.-++-..|++.+++-+++.+.+.. ....+++|+-.-
T Consensus 44 s~drl~~li~Wa-~~~F~~vdVli~D~~~~~tl~A~G~~~~~A~rKarr~~~~~r~~i~ral~~~~--~~~~~~rv~~~S 120 (247)
T 3oqv_A 44 SQKNTVMLLQWA-GQRFERTDVVYVDTHIDEMLIADGRSAQEAERSVKRTLKDLRRRLRRSLESVG--DHAERFRVRSLS 120 (247)
T ss_dssp CHHHHHHHHHHH-HHHEEEEEEEEECSSHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHHHHC--TTGGGEEEEEHH
T ss_pred CHHHHHHHHHHH-HccCCceEEEeCChHHhhhhhhcCCChHHHHHHHHHHHHHHHHHHHHHHHHhC--CCccCceeeeHH
Confidence 347899999999 67888888877654 1223344666677766666665422 223356666666
Q ss_pred CCCCCCHHHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHHHhcCCC-CCCCCCHHHHHhh
Q 044091 189 DTSKLPKCLEELVINVVETTKNNTRFQLIVAVSYSGQYDLVQACQRIAMKVKDGLI-EPNDVSESLIEQE 257 (275)
Q Consensus 189 d~~~LP~~l~~~i~~~e~~T~~~~~~~lniai~YgGR~EIv~A~r~l~~~v~~g~l-~~edI~e~~i~~~ 257 (275)
|.. .-+..++....++.. |...++.-+||.++...+..+++ .-..++++.++..
T Consensus 121 d~~-~~~~Y~~l~~~ve~a--------------~~~d~~fR~ac~~ms~~~l~~rl~~g~~~~e~~l~~a 175 (247)
T 3oqv_A 121 ELQ-ETPEYRAVRERTDRA--------------FEEDAEFATACEDMVRAVVMNRPGDGVGISAEHLRAG 175 (247)
T ss_dssp HHT-TSHHHHHHHHHHHHH--------------HHHCHHHHHHHHHHHHHHHHTCSSSCCCCCHHHHHHH
T ss_pred Hhh-CCHHHHHHHHHHHHH--------------HhcCHHHHHHHHHHHHHHHHcccCCCCCCCHHHHHHH
Confidence 764 456678888888876 33446677778877777767776 3345778777644
No 63
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=52.20 E-value=30 Score=31.07 Aligned_cols=122 Identities=12% Similarity=0.068 Sum_probs=80.6
Q ss_pred hhHHHHHHHHHHHHHcCCCeEEEEeeecCCCCCCHHHHHHHHHHHHHhHHHHHHHhhcCCcEEE-EecCCCCCCHHHHHH
Q 044091 122 AGVKSLKTLVELCCKWGIRVLTVFAFSSDNWFRPEVEVEFLMSLLESGVKEEKESFIRERIRIS-VIGDTSKLPKCLEEL 200 (275)
Q Consensus 122 ~G~~~l~eiv~wc~~~GI~~lTvYaFSteN~kRp~~EV~~Lm~l~~~~l~~~~~~~~~~~irvr-~iGd~~~LP~~l~~~ 200 (275)
--++.+.++++|..+.||.-|.+..-+.|.+.=+.+|...+++...+... ..+.|- -+|..+ -.+..+.
T Consensus 22 iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~--------grvpviaGvg~~~--t~~ai~l 91 (300)
T 3eb2_A 22 VRADVMGRLCDDLIQAGVHGLTPLGSTGEFAYLGTAQREAVVRATIEAAQ--------RRVPVVAGVASTS--VADAVAQ 91 (300)
T ss_dssp BCHHHHHHHHHHHHHTTCSCBBTTSGGGTGGGCCHHHHHHHHHHHHHHHT--------TSSCBEEEEEESS--HHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECccccCccccCHHHHHHHHHHHHHHhC--------CCCcEEEeCCCCC--HHHHHHH
Confidence 44788999999999999999998888889999999999999887766543 122222 234432 2333444
Q ss_pred HHHHHHHhcCCCceEEEEEecC--CCHHHHHHHHHHHHHHHhcC-------CCCCCCCCHHHHHh
Q 044091 201 VINVVETTKNNTRFQLIVAVSY--SGQYDLVQACQRIAMKVKDG-------LIEPNDVSESLIEQ 256 (275)
Q Consensus 201 i~~~e~~T~~~~~~~lniai~Y--gGR~EIv~A~r~l~~~v~~g-------~l~~edI~e~~i~~ 256 (275)
.+.+++. .-+..+-+.=.| -+.+++++-.+.+++.+.-- ..+--+++.+++.+
T Consensus 92 a~~a~~~---Gadavlv~~P~y~~~~~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~ 153 (300)
T 3eb2_A 92 AKLYEKL---GADGILAILEAYFPLKDAQIESYFRAIADAVEIPVVIYTNPQFQRSDLTLDVIAR 153 (300)
T ss_dssp HHHHHHH---TCSEEEEEECCSSCCCHHHHHHHHHHHHHHCSSCEEEEECTTTCSSCCCHHHHHH
T ss_pred HHHHHHc---CCCEEEEcCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECccccCCCCCHHHHHH
Confidence 4444443 444455555555 37899999999999874210 01123677777654
No 64
>3ngf_A AP endonuclease, family 2; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 1.80A {Brucella melitensis biovar abortus} SCOP: c.1.15.0
Probab=51.32 E-value=68 Score=27.08 Aligned_cols=64 Identities=6% Similarity=-0.042 Sum_probs=43.3
Q ss_pred chhhhHHHHHHHHHHHHHcCCCeEEEEeeecCCCCCCHHHHHHHHHHHHHhHHHHHHHhhcCCcEEEEe
Q 044091 119 GYEAGVKSLKTLVELCCKWGIRVLTVFAFSSDNWFRPEVEVEFLMSLLESGVKEEKESFIRERIRISVI 187 (275)
Q Consensus 119 Gh~~G~~~l~eiv~wc~~~GI~~lTvYaFSteN~kRp~~EV~~Lm~l~~~~l~~~~~~~~~~~irvr~i 187 (275)
-..+..+.+.+.++.|.++|++.|.+..-..+ ..+.+ .-++.+.+.|++..+...+.||++-+-
T Consensus 87 ~r~~~~~~~~~~i~~A~~lGa~~v~~~~g~~~--~~~~~---~~~~~~~~~l~~l~~~a~~~Gv~l~lE 150 (269)
T 3ngf_A 87 REQEFRDNVDIALHYALALDCRTLHAMSGITE--GLDRK---ACEETFIENFRYAADKLAPHGITVLVE 150 (269)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCCEEECCBCBCT--TSCHH---HHHHHHHHHHHHHHHHHGGGTCEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHcCCCEEEEccCCCC--CCCHH---HHHHHHHHHHHHHHHHHHHcCCEEEEe
Confidence 34567889999999999999999988543111 12222 223445555666666677889998875
No 65
>3cqj_A L-ribulose-5-phosphate 3-epimerase ULAE; TIM-barrel, isomerase, phosphate-binding motif; 2.04A {Escherichia coli} PDB: 3cqi_A 3cqh_A 3cqk_A
Probab=51.03 E-value=17 Score=31.30 Aligned_cols=64 Identities=17% Similarity=0.349 Sum_probs=41.4
Q ss_pred hhhhHHHHHHHHHHHHHcCCCeEEEEeeecCCCC-CCHHHHHHHHHHHHHhHHHHHHHhhcCCcEEEEec
Q 044091 120 YEAGVKSLKTLVELCCKWGIRVLTVFAFSSDNWF-RPEVEVEFLMSLLESGVKEEKESFIRERIRISVIG 188 (275)
Q Consensus 120 h~~G~~~l~eiv~wc~~~GI~~lTvYaFSteN~k-Rp~~EV~~Lm~l~~~~l~~~~~~~~~~~irvr~iG 188 (275)
.....+.+.+.++.|.++|++.|.+..+. .|. .+.++ -++.+.+.|++..+...+.||++-+--
T Consensus 103 r~~~~~~~~~~i~~A~~lG~~~v~~~~~~--~~~~~~~~~---~~~~~~~~l~~l~~~a~~~Gv~l~lEn 167 (295)
T 3cqj_A 103 RAQGLEIMRKAIQFAQDVGIRVIQLAGYD--VYYQEANNE---TRRRFRDGLKESVEMASRAQVTLAMEI 167 (295)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCEEEECCCS--CSSSCCCHH---HHHHHHHHHHHHHHHHHHHTCEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEECCCC--CCcCcCHHH---HHHHHHHHHHHHHHHHHHhCCEEEEee
Confidence 34567889999999999999999875332 221 12121 233444555555566677889887744
No 66
>1olt_A Oxygen-independent coproporphyrinogen III oxidase; heme biosynthesis, decarboxylase, radical SAM enzyme, 4Fe- 4 cluster; HET: SAM; 2.07A {Escherichia coli} SCOP: c.1.28.2
Probab=50.91 E-value=41 Score=31.70 Aligned_cols=46 Identities=15% Similarity=0.138 Sum_probs=34.5
Q ss_pred hHHHHcCCCCC-----cch-hhhHHHHHHHHHHHHHcCCCeEEEEeeecCCC
Q 044091 107 RWAHLRGLPVG-----SGY-EAGVKSLKTLVELCCKWGIRVLTVFAFSSDNW 152 (275)
Q Consensus 107 RwAk~~gl~~~-----~Gh-~~G~~~l~eiv~wc~~~GI~~lTvYaFSteN~ 152 (275)
++|++.|+... -|. .+..+.+.+.++++.++|+.++++|.|+..-+
T Consensus 196 ~~~r~~G~~~v~~dlI~GlPget~e~~~~tl~~~~~l~~~~i~~y~l~~~p~ 247 (457)
T 1olt_A 196 NHAREIGFTSTNIDLIYGLPKQTPESFAFTLKRVAELNPDRLSVFNYAHLPT 247 (457)
T ss_dssp HHHHHTTCCSCEEEEEESCTTCCHHHHHHHHHHHHHHCCSEEEEEECCCCTT
T ss_pred HHHHHcCCCcEEEEEEcCCCCCCHHHHHHHHHHHHhcCcCEEEeecCcCCcC
Confidence 36777777622 232 34578999999999999999999999985444
No 67
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=50.55 E-value=1.3e+02 Score=26.49 Aligned_cols=106 Identities=22% Similarity=0.172 Sum_probs=71.9
Q ss_pred hhHHHHHHHHHHHHHcCCCeEEEEeeecCCCCCCHHHHHHHHHHHHHhHHHHHHHhhcCCcEEEEecCCCCCCHHHHHHH
Q 044091 122 AGVKSLKTLVELCCKWGIRVLTVFAFSSDNWFRPEVEVEFLMSLLESGVKEEKESFIRERIRISVIGDTSKLPKCLEELV 201 (275)
Q Consensus 122 ~G~~~l~eiv~wc~~~GI~~lTvYaFSteN~kRp~~EV~~Lm~l~~~~l~~~~~~~~~~~irvr~iGd~~~LP~~l~~~i 201 (275)
--.+.+.++++|..+.||.-+.+..-+.|.+.=+.+|...+++...+... ..+.|- .|--+.=-.+..+..
T Consensus 19 iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~--------gr~pvi-aGvg~~~t~~ai~la 89 (291)
T 3tak_A 19 VDWKSLEKLVEWHIEQGTNSIVAVGTTGEASTLSMEEHTQVIKEIIRVAN--------KRIPII-AGTGANSTREAIELT 89 (291)
T ss_dssp BCHHHHHHHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHT--------TSSCEE-EECCCSSHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHCCCCEEEECccccccccCCHHHHHHHHHHHHHHhC--------CCCeEE-EeCCCCCHHHHHHHH
Confidence 44788999999999999999998888889888899999998887766543 223332 243322133334444
Q ss_pred HHHHHHhcCCCceEEEEEecC--CCHHHHHHHHHHHHHHH
Q 044091 202 INVVETTKNNTRFQLIVAVSY--SGQYDLVQACQRIAMKV 239 (275)
Q Consensus 202 ~~~e~~T~~~~~~~lniai~Y--gGR~EIv~A~r~l~~~v 239 (275)
+.+++. .-+..+-+.=.| -+.+++++-.+.+++.+
T Consensus 90 ~~a~~~---Gadavlv~~P~y~~~~~~~l~~~f~~ia~a~ 126 (291)
T 3tak_A 90 KAAKDL---GADAALLVTPYYNKPTQEGLYQHYKAIAEAV 126 (291)
T ss_dssp HHHHHH---TCSEEEEECCCSSCCCHHHHHHHHHHHHHHC
T ss_pred HHHHhc---CCCEEEEcCCCCCCCCHHHHHHHHHHHHHhc
Confidence 444443 344444444334 47899999999999864
No 68
>2q02_A Putative cytoplasmic protein; structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; 2.40A {Salmonella typhimurium LT2} SCOP: c.1.15.4
Probab=47.77 E-value=24 Score=29.64 Aligned_cols=57 Identities=19% Similarity=0.140 Sum_probs=36.1
Q ss_pred hHHHHHHHHHHHHHcCCCeEEEEeeecCCCCCCHHHHHHHHHHHHHhHHHHHHHhhcCCcEEEEe
Q 044091 123 GVKSLKTLVELCCKWGIRVLTVFAFSSDNWFRPEVEVEFLMSLLESGVKEEKESFIRERIRISVI 187 (275)
Q Consensus 123 G~~~l~eiv~wc~~~GI~~lTvYaFSteN~kRp~~EV~~Lm~l~~~~l~~~~~~~~~~~irvr~i 187 (275)
-.+.+.+.++.|.++|++.|.+..... .+ +..+.+ ..+.|++..+...++||++-+-
T Consensus 83 ~~~~~~~~i~~a~~lG~~~v~~~~g~~----~~-~~~~~~---~~~~l~~l~~~a~~~gv~l~~E 139 (272)
T 2q02_A 83 VVKKTEGLLRDAQGVGARALVLCPLND----GT-IVPPEV---TVEAIKRLSDLFARYDIQGLVE 139 (272)
T ss_dssp HHHHHHHHHHHHHHHTCSEEEECCCCS----SB-CCCHHH---HHHHHHHHHHHHHTTTCEEEEC
T ss_pred HHHHHHHHHHHHHHhCCCEEEEccCCC----ch-hHHHHH---HHHHHHHHHHHHHHcCCEEEEE
Confidence 457889999999999999999854321 11 112221 1344444445567789988774
No 69
>3guv_A Site-specific recombinase, resolvase family prote; structural genomics, PSI-2, protein structure initiative; 2.20A {Streptococcus pneumoniae}
Probab=47.66 E-value=77 Score=25.22 Aligned_cols=74 Identities=5% Similarity=0.050 Sum_probs=48.2
Q ss_pred HHHHHHHHHHHHcCCCeEEEEe---eecCCC-CCCHHHHHHHHHHHHHhHHHHHHHhhcCC--cEEEEecCCCCCCHHHH
Q 044091 125 KSLKTLVELCCKWGIRVLTVFA---FSSDNW-FRPEVEVEFLMSLLESGVKEEKESFIRER--IRISVIGDTSKLPKCLE 198 (275)
Q Consensus 125 ~~l~eiv~wc~~~GI~~lTvYa---FSteN~-kRp~~EV~~Lm~l~~~~l~~~~~~~~~~~--irvr~iGd~~~LP~~l~ 198 (275)
.....+-+||.+.|+..+-+|. .|..++ +||. ...|++. +.+.. +.+-++-++++|..+..
T Consensus 26 ~Q~~~l~~~a~~~g~~i~~~~~D~g~Sg~~~~~Rp~--l~~ll~~-----------~~~g~~~~d~lvv~~ldRl~R~~~ 92 (167)
T 3guv_A 26 AQKSRMKAFAIYNDYEIVGEYEDAGKSGKSIEGRIQ--FNRMMED-----------IKSGKDGVSFVLVFKLSRFARNAA 92 (167)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEEECCCSSSSSCCCHH--HHHHHHH-----------HHTCTTCCSEEEESCGGGTCSSHH
T ss_pred HHHHHHHHHHHhCCCEEEEEEeecCCCCCCcccCHH--HHHHHHH-----------HHcCCCCccEEEEEeCchhcCCHH
Confidence 4456677789999998888885 577775 5653 3344432 22222 67778888888888777
Q ss_pred HHHHHHHHHhcCC
Q 044091 199 ELVINVVETTKNN 211 (275)
Q Consensus 199 ~~i~~~e~~T~~~ 211 (275)
..+.-++.....+
T Consensus 93 ~~~~~~~~l~~~g 105 (167)
T 3guv_A 93 DVLSTLQIMQDYG 105 (167)
T ss_dssp HHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHCC
Confidence 7666666554443
No 70
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=47.14 E-value=1.5e+02 Score=26.16 Aligned_cols=106 Identities=16% Similarity=0.170 Sum_probs=72.2
Q ss_pred hhHHHHHHHHHHHHHcCCCeEEEEeeecCCCCCCHHHHHHHHHHHHHhHHHHHHHhhcCCcEEEEecCCCCCCHHHHHHH
Q 044091 122 AGVKSLKTLVELCCKWGIRVLTVFAFSSDNWFRPEVEVEFLMSLLESGVKEEKESFIRERIRISVIGDTSKLPKCLEELV 201 (275)
Q Consensus 122 ~G~~~l~eiv~wc~~~GI~~lTvYaFSteN~kRp~~EV~~Lm~l~~~~l~~~~~~~~~~~irvr~iGd~~~LP~~l~~~i 201 (275)
--.+.+.++++|..+.||.-|.+..-+.|.+.=+.+|...+++...+... ..+.|- .|--+.=-.+..+..
T Consensus 20 iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Lt~~Er~~v~~~~~~~~~--------grvpvi-aGvg~~~t~~ai~la 90 (292)
T 3daq_A 20 VNLEALKAHVNFLLENNAQAIIVNGTTAESPTLTTDEKELILKTVIDLVD--------KRVPVI-AGTGTNDTEKSIQAS 90 (292)
T ss_dssp ECHHHHHHHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHT--------TSSCEE-EECCCSCHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECccccccccCCHHHHHHHHHHHHHHhC--------CCCcEE-EeCCcccHHHHHHHH
Confidence 44688999999999999999999998899999999999998887766442 233332 243222123334444
Q ss_pred HHHHHHhcCCCceEEEEEecC--CCHHHHHHHHHHHHHHH
Q 044091 202 INVVETTKNNTRFQLIVAVSY--SGQYDLVQACQRIAMKV 239 (275)
Q Consensus 202 ~~~e~~T~~~~~~~lniai~Y--gGR~EIv~A~r~l~~~v 239 (275)
+.+++. .-+..+-+.=.| -+.++|++-.+.+++.+
T Consensus 91 ~~a~~~---Gadavlv~~P~y~~~~~~~l~~~f~~ia~a~ 127 (292)
T 3daq_A 91 IQAKAL---GADAIMLITPYYNKTNQRGLVKHFEAIADAV 127 (292)
T ss_dssp HHHHHH---TCSEEEEECCCSSCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHc---CCCEEEECCCCCCCCCHHHHHHHHHHHHHhC
Confidence 444443 344444443333 46799999999999875
No 71
>3gqe_A Non-structural protein 3; macro domain, X domain, venezuelan equine encephalitis virus alphavirus; HET: BCN; 2.30A {Venezuelan equine encephalitis virus} PDB: 3gqo_A*
Probab=46.90 E-value=37 Score=28.27 Aligned_cols=72 Identities=6% Similarity=0.047 Sum_probs=49.3
Q ss_pred HHHHHHHHHHHHcCCCeEEEEeeecCCCCCCHHHHHHHHHHHHHhHHHHHHHhhcCCcEEEEecCCCCCCHHHHHHHHHH
Q 044091 125 KSLKTLVELCCKWGIRVLTVFAFSSDNWFRPEVEVEFLMSLLESGVKEEKESFIRERIRISVIGDTSKLPKCLEELVINV 204 (275)
Q Consensus 125 ~~l~eiv~wc~~~GI~~lTvYaFSteN~kRp~~EV~~Lm~l~~~~l~~~~~~~~~~~irvr~iGd~~~LP~~l~~~i~~~ 204 (275)
+...+.++.|.+.|++.|.|=+.|+.++.=|.+++...|. ++|+. +......|.++- +.++..++++++
T Consensus 89 ~~y~~~L~~a~~~~~~SIAfP~IstG~~g~p~~~aa~~i~---~~l~~----~~~~~~~V~iv~----fd~~~~~~~~~~ 157 (168)
T 3gqe_A 89 EAYESIAKIVNDNNYKSVAIPLLSTGIFSGNKDRLTQSLN---HLLTA----LDTTDADVAIYC----RDKKWEMTLKEA 157 (168)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECTTSSTTSCSSCCHHHHHH---HHHHH----HTTSCCEEEEEE----SCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEECCcccCCCCCCHHHHHHHHH---HHHHH----CCCCCCeEEEEE----cCHHHHHHHHHH
Confidence 3455677777889999999999999999999999888554 44432 222234555553 455666666665
Q ss_pred HHH
Q 044091 205 VET 207 (275)
Q Consensus 205 e~~ 207 (275)
-..
T Consensus 158 ~~~ 160 (168)
T 3gqe_A 158 VAR 160 (168)
T ss_dssp HHH
T ss_pred HHh
Confidence 554
No 72
>3hq1_A 2-isopropylmalate synthase; LEUA, mycobacterium tuberculosis inhibition, bromopyruvate, amino-acid biosynthesis; HET: FLC; 1.70A {Mycobacterium tuberculosis} PDB: 1sr9_A 3hpz_A 3hps_A* 3fig_A 3u6w_A 3hpx_A
Probab=46.83 E-value=1.7e+02 Score=29.47 Aligned_cols=113 Identities=7% Similarity=0.046 Sum_probs=69.8
Q ss_pred HHHHHHHHHHcCCCeEEEEe-----eecCCCCCCHHHHHHHHHHHHHhHHHHHHHhhcCCcEEEEec-CCCCC-CHHHHH
Q 044091 127 LKTLVELCCKWGIRVLTVFA-----FSSDNWFRPEVEVEFLMSLLESGVKEEKESFIRERIRISVIG-DTSKL-PKCLEE 199 (275)
Q Consensus 127 l~eiv~wc~~~GI~~lTvYa-----FSteN~kRp~~EV~~Lm~l~~~~l~~~~~~~~~~~irvr~iG-d~~~L-P~~l~~ 199 (275)
+...++.+...|+..|.+|. |...|++.+.+|+-....-...++.+....+..-++.+.+-+ |...- |+.+.+
T Consensus 151 id~a~eal~~a~~~~Vhif~stSd~h~~~~l~~s~eevle~~~~~v~~a~~~~~~~~~~~~~v~fs~Edasrtd~dfl~e 230 (644)
T 3hq1_A 151 IERTFQACSGAPRAIVHFYNSTSILQRRVVFRANRAEVQAIATDGARKCVEQAAKYPGTQWRFEYSPESYTGTELEYAKQ 230 (644)
T ss_dssp HHHHHHHHTTCSEEEEEEEEECCHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHSCSSEEEEEEEEETGGGSCHHHHHH
T ss_pred HHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhccCceEEEEEcCcccCCCCHHHHHH
Confidence 45566666778999999986 445789999999877665544444443322222246677766 22223 344455
Q ss_pred HHHHHHHHhcCCC--ceEEEEE--ecCCCHHHHHHHHHHHHHHH
Q 044091 200 LVINVVETTKNNT--RFQLIVA--VSYSGQYDLVQACQRIAMKV 239 (275)
Q Consensus 200 ~i~~~e~~T~~~~--~~~lnia--i~YgGR~EIv~A~r~l~~~v 239 (275)
.++.+.+.-.... ...|||+ ++|.--.++.+.++.|.+.+
T Consensus 231 v~~aa~eaG~~Gad~~~~I~LpDTvG~~tP~~~~~li~~l~~~v 274 (644)
T 3hq1_A 231 VCDAVGEVIAPTPERPIIFNLPATVEMTTPNVYADSIEWMSRNL 274 (644)
T ss_dssp HHHHHHHHHCCCSSSCEEEEEEESSCCSCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHhcCCCCCceeEEEecCCCcccCHHHHHHHHHHHHHhc
Confidence 5665665432222 2467777 77888888877777776554
No 73
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=46.69 E-value=1.5e+02 Score=26.05 Aligned_cols=96 Identities=11% Similarity=0.077 Sum_probs=54.7
Q ss_pred HHHHHHcCCCeEEEEee-----ecCCCCCCHHHHHHHHHHHHHhHHHHHHHhhcCCcEEE--E---ec--CCCCC-CHHH
Q 044091 131 VELCCKWGIRVLTVFAF-----SSDNWFRPEVEVEFLMSLLESGVKEEKESFIRERIRIS--V---IG--DTSKL-PKCL 197 (275)
Q Consensus 131 v~wc~~~GI~~lTvYaF-----SteN~kRp~~EV~~Lm~l~~~~l~~~~~~~~~~~irvr--~---iG--d~~~L-P~~l 197 (275)
++.+.+.|++.|.++.- ...|++++.+|.-..+.-.. +..++.|+.|+ + .| |-..- |+.+
T Consensus 85 i~~a~~~G~~~V~i~~~~S~~h~~~~~~~~~~e~~~~~~~~v-------~~a~~~G~~V~~~l~~~~~~e~~~~~~~~~~ 157 (295)
T 1ydn_A 85 YEAAAAAHADEIAVFISASEGFSKANINCTIAESIERLSPVI-------GAAINDGLAIRGYVSCVVECPYDGPVTPQAV 157 (295)
T ss_dssp HHHHHHTTCSEEEEEEESCHHHHHHHTSSCHHHHHHHHHHHH-------HHHHHTTCEEEEEEECSSEETTTEECCHHHH
T ss_pred HHHHHHCCCCEEEEEEecCHHHHHHHcCCCHHHHHHHHHHHH-------HHHHHcCCeEEEEEEEEecCCcCCCCCHHHH
Confidence 45677899999999752 23467788877544333222 23456788877 1 11 11122 4555
Q ss_pred HHHHHHHHHHhcCCCceEEEEE--ecCCCHHHHHHHHHHHHH
Q 044091 198 EELVINVVETTKNNTRFQLIVA--VSYSGQYDLVQACQRIAM 237 (275)
Q Consensus 198 ~~~i~~~e~~T~~~~~~~lnia--i~YgGR~EIv~A~r~l~~ 237 (275)
.+.++.+.+.-. + .|+|+ .++..=+++.+.++.+.+
T Consensus 158 ~~~~~~~~~~G~--d--~i~l~Dt~G~~~P~~~~~lv~~l~~ 195 (295)
T 1ydn_A 158 ASVTEQLFSLGC--H--EVSLGDTIGRGTPDTVAAMLDAVLA 195 (295)
T ss_dssp HHHHHHHHHHTC--S--EEEEEETTSCCCHHHHHHHHHHHHT
T ss_pred HHHHHHHHhcCC--C--EEEecCCCCCcCHHHHHHHHHHHHH
Confidence 555555555432 2 56666 555555666666666543
No 74
>3pzj_A Probable acetyltransferases; MCSG, PSI-2, structural genomics, protein structure initiati midwest center for structural genomics; HET: MSE; 1.85A {Chromobacterium violaceum}
Probab=46.63 E-value=41 Score=26.81 Aligned_cols=36 Identities=17% Similarity=0.078 Sum_probs=29.6
Q ss_pred CCCcchhhhHHHHHHHHHHHHHcCCCeEEEEeeecCC
Q 044091 115 PVGSGYEAGVKSLKTLVELCCKWGIRVLTVFAFSSDN 151 (275)
Q Consensus 115 ~~~~Gh~~G~~~l~eiv~wc~~~GI~~lTvYaFSteN 151 (275)
+...|.--|-+.+..+++|+.+.|++.|.++.+. +|
T Consensus 129 ~~~~g~Gig~~ll~~l~~~a~~~g~~~i~l~v~~-~N 164 (209)
T 3pzj_A 129 PALRRTRLATEAVFLLLKTAFELGYRRCEWRCDS-RN 164 (209)
T ss_dssp TTTTTSHHHHHHHHHHHHHHHHTTCSEEEEEEET-TC
T ss_pred HHHhcCCHHHHHHHHHHHHHHHcCCcEEEEeecC-CC
Confidence 3455666778889999999999999999999875 45
No 75
>3kws_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 1.68A {Parabacteroides distasonis atcc 8503}
Probab=46.07 E-value=1.2e+02 Score=25.55 Aligned_cols=63 Identities=6% Similarity=0.021 Sum_probs=42.4
Q ss_pred hhhhHHHHHHHHHHHHHcCCCeEEEEeeecCCCC----CCHHHHHHHHHHHHHhHHHHHHHhhcCCcEEEEe
Q 044091 120 YEAGVKSLKTLVELCCKWGIRVLTVFAFSSDNWF----RPEVEVEFLMSLLESGVKEEKESFIRERIRISVI 187 (275)
Q Consensus 120 h~~G~~~l~eiv~wc~~~GI~~lTvYaFSteN~k----Rp~~EV~~Lm~l~~~~l~~~~~~~~~~~irvr~i 187 (275)
..+..+.+.+.+++|..+|++.|.+..-. ..+. ...+. ++.+.+.|++..+...++||++-+-
T Consensus 99 r~~~~~~~~~~i~~a~~lGa~~v~~~~g~-~~~~~~~p~~~~~----~~~~~~~l~~l~~~a~~~Gv~l~lE 165 (287)
T 3kws_A 99 RKECMDTMKEIIAAAGELGSTGVIIVPAF-NGQVPALPHTMET----RDFLCEQFNEMGTFAAQHGTSVIFE 165 (287)
T ss_dssp HHHHHHHHHHHHHHHHHTTCSEEEECSCC-TTCCSBCCSSHHH----HHHHHHHHHHHHHHHHHTTCCEEEC
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEEecCc-CCcCCCCCCHHHH----HHHHHHHHHHHHHHHHHcCCEEEEE
Confidence 45667899999999999999999885311 1222 12232 3444555555566677889998886
No 76
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=45.01 E-value=1.5e+02 Score=27.55 Aligned_cols=105 Identities=12% Similarity=0.058 Sum_probs=71.9
Q ss_pred hhHHHHHHHHHHHHHcCCCeEEEEeeecCCCCCCHHHHHHHHHHHHHhHHHHHHHhhcCCcEEEEecCCCCCCHHHHHHH
Q 044091 122 AGVKSLKTLVELCCKWGIRVLTVFAFSSDNWFRPEVEVEFLMSLLESGVKEEKESFIRERIRISVIGDTSKLPKCLEELV 201 (275)
Q Consensus 122 ~G~~~l~eiv~wc~~~GI~~lTvYaFSteN~kRp~~EV~~Lm~l~~~~l~~~~~~~~~~~irvr~iGd~~~LP~~l~~~i 201 (275)
--.+.+.++++|..+.||.-+.+..-+.|...=+.+|-..+++...+... ..+.|-+ |--+. .+.+.+
T Consensus 77 ID~~al~~lv~~li~~Gv~Gl~v~GTTGE~~~Ls~eEr~~vi~~~ve~~~--------grvpVia-Gvg~~---st~eai 144 (360)
T 4dpp_A 77 FDLEAYDDLVNIQIQNGAEGVIVGGTTGEGQLMSWDEHIMLIGHTVNCFG--------GSIKVIG-NTGSN---STREAI 144 (360)
T ss_dssp BCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHT--------TTSEEEE-ECCCS---SHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEecccccChhhCCHHHHHHHHHHHHHHhC--------CCCeEEE-ecCCC---CHHHHH
Confidence 44788999999999999999999888889888899999988887665432 2344433 33221 244555
Q ss_pred HHHHHHhcCCCceEEEEEecC--CCHHHHHHHHHHHHHH
Q 044091 202 INVVETTKNNTRFQLIVAVSY--SGQYDLVQACQRIAMK 238 (275)
Q Consensus 202 ~~~e~~T~~~~~~~lniai~Y--gGR~EIv~A~r~l~~~ 238 (275)
+.+....+-..+..+.+.=-| -+.++|++-.+.+++.
T Consensus 145 ~la~~A~~~Gadavlvv~PyY~k~sq~gl~~hf~~IA~a 183 (360)
T 4dpp_A 145 HATEQGFAVGMHAALHINPYYGKTSIEGLIAHFQSVLHM 183 (360)
T ss_dssp HHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHTTGGG
T ss_pred HHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHh
Confidence 544444444445555554444 3678999999988763
No 77
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=44.86 E-value=1.7e+02 Score=26.08 Aligned_cols=124 Identities=15% Similarity=0.070 Sum_probs=80.2
Q ss_pred hhHHHHHHHHHHHHHcCCCeEEEEeeecCCCCCCHHHHHHHHHHHHHhHHHHHHHhhcCCcEEEEecCCCCCCHHHHHHH
Q 044091 122 AGVKSLKTLVELCCKWGIRVLTVFAFSSDNWFRPEVEVEFLMSLLESGVKEEKESFIRERIRISVIGDTSKLPKCLEELV 201 (275)
Q Consensus 122 ~G~~~l~eiv~wc~~~GI~~lTvYaFSteN~kRp~~EV~~Lm~l~~~~l~~~~~~~~~~~irvr~iGd~~~LP~~l~~~i 201 (275)
--.+.+.++++|..+.||.-+.+..-+.|.+.=+.+|...+++...+... ..+.|- +|--+.=-.+..+..
T Consensus 33 iD~~~l~~lv~~li~~Gv~gi~v~GttGE~~~Lt~~Er~~v~~~~~~~~~--------grvpvi-aGvg~~~t~~ai~la 103 (304)
T 3l21_A 33 LDTATAARLANHLVDQGCDGLVVSGTTGESPTTTDGEKIELLRAVLEAVG--------DRARVI-AGAGTYDTAHSIRLA 103 (304)
T ss_dssp BCHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHT--------TTSEEE-EECCCSCHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhC--------CCCeEE-EeCCCCCHHHHHHHH
Confidence 44788999999999999999999888889999999999998887766543 234443 243222234444444
Q ss_pred HHHHHHhcCCCceEEEEEecC--CCHHHHHHHHHHHHHHHhcCCC-------CCCCCCHHHHHhh
Q 044091 202 INVVETTKNNTRFQLIVAVSY--SGQYDLVQACQRIAMKVKDGLI-------EPNDVSESLIEQE 257 (275)
Q Consensus 202 ~~~e~~T~~~~~~~lniai~Y--gGR~EIv~A~r~l~~~v~~g~l-------~~edI~e~~i~~~ 257 (275)
+.+++. .-+..+-+.=.| .+.++|++-.+++++.+.---+ +--+++.+++.+-
T Consensus 104 ~~a~~~---Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~L 165 (304)
T 3l21_A 104 KACAAE---GAHGLLVVTPYYSKPPQRGLQAHFTAVADATELPMLLYDIPGRSAVPIEPDTIRAL 165 (304)
T ss_dssp HHHHHH---TCSEEEEECCCSSCCCHHHHHHHHHHHHTSCSSCEEEEECHHHHSSCCCHHHHHHH
T ss_pred HHHHHc---CCCEEEECCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCCCCHHHHHHH
Confidence 555543 334444443333 3679999999999865310000 0136777777643
No 78
>1k77_A EC1530, hypothetical protein YGBM; TIM barrel, structural genomics, PSI, structure initiative; 1.63A {Escherichia coli} SCOP: c.1.15.5
Probab=44.57 E-value=1.3e+02 Score=24.76 Aligned_cols=65 Identities=11% Similarity=0.006 Sum_probs=42.8
Q ss_pred chhhhHHHHHHHHHHHHHcCCCeEEEEeeecCCCCCCHHHHHHHHHHHHHhHHHHHHHhhcCCcEEEEe
Q 044091 119 GYEAGVKSLKTLVELCCKWGIRVLTVFAFSSDNWFRPEVEVEFLMSLLESGVKEEKESFIRERIRISVI 187 (275)
Q Consensus 119 Gh~~G~~~l~eiv~wc~~~GI~~lTvYaFSteN~kRp~~EV~~Lm~l~~~~l~~~~~~~~~~~irvr~i 187 (275)
-.....+.+.+.++.|.++|++.|.+..-.. ....+.+ .-++.+.+.|++..+...+.||++-+-
T Consensus 79 ~~~~~~~~~~~~i~~a~~lG~~~v~~~~g~~-~~~~~~~---~~~~~~~~~l~~l~~~a~~~gv~l~~E 143 (260)
T 1k77_A 79 REHEAHADIDLALEYALALNCEQVHVMAGVV-PAGEDAE---RYRAVFIDNIRYAADRFAPHGKRILVE 143 (260)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCSEEECCCCBC-CTTSCHH---HHHHHHHHHHHHHHHHHGGGTCEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHcCCCEEEECcCCC-CCCCCHH---HHHHHHHHHHHHHHHHHHHcCCEEEEE
Confidence 3456789999999999999999997743211 0111222 233445556665566677889998773
No 79
>2eee_A Uncharacterized protein C6ORF130; macro domain, A1PP domain, ADP-ribose binding, rossmann fold, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2l8r_A*
Probab=43.40 E-value=62 Score=25.88 Aligned_cols=41 Identities=20% Similarity=0.143 Sum_probs=35.3
Q ss_pred HHHHHHHHHHHHHcCCCeEEEEeeecCCCCCCHHHHHHHHH
Q 044091 124 VKSLKTLVELCCKWGIRVLTVFAFSSDNWFRPEVEVEFLMS 164 (275)
Q Consensus 124 ~~~l~eiv~wc~~~GI~~lTvYaFSteN~kRp~~EV~~Lm~ 164 (275)
.+.+.++++.|.+.|++.|.+=+.|+.++.=|.+++..+|.
T Consensus 94 ~~~l~~~l~~a~~~~~~sIa~P~IgtG~~G~~~~~v~~ii~ 134 (149)
T 2eee_A 94 QKSLEAMKSHCLKNGVTDLSMPRIGCGLDRLQWENVSAMIE 134 (149)
T ss_dssp HHHHHHHHHHHHHHTCCEEECCCCCCTTTTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCHHHHHHHHH
Confidence 35566777788889999999999999999999999988764
No 80
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=43.10 E-value=77 Score=28.81 Aligned_cols=99 Identities=15% Similarity=0.166 Sum_probs=56.8
Q ss_pred HHHHHHHcCCCeEEEEe-----eecCCCCCCHHHHHHHHHHHHHhHHHHHHHhhcCCcEEEEecCC----CCC-CHHHHH
Q 044091 130 LVELCCKWGIRVLTVFA-----FSSDNWFRPEVEVEFLMSLLESGVKEEKESFIRERIRISVIGDT----SKL-PKCLEE 199 (275)
Q Consensus 130 iv~wc~~~GI~~lTvYa-----FSteN~kRp~~EV~~Lm~l~~~~l~~~~~~~~~~~irvr~iGd~----~~L-P~~l~~ 199 (275)
-++.+.+.|++.+.+|. |...|++++.+|.-..+.-+. +...+.|..|++.-.. ..- |+.+.+
T Consensus 101 ~i~~a~~~g~~~v~i~~~~s~~~~~~~~~~s~~e~l~~~~~~v-------~~ak~~G~~v~~~~~~~~~~~~~~~~~~~~ 173 (337)
T 3ble_A 101 TVDWIKDSGAKVLNLLTKGSLHHLEKQLGKTPKEFFTDVSFVI-------EYAIKSGLKINVYLEDWSNGFRNSPDYVKS 173 (337)
T ss_dssp HHHHHHHHTCCEEEEEEECSHHHHHHHTCCCHHHHHHHHHHHH-------HHHHHTTCEEEEEEETHHHHHHHCHHHHHH
T ss_pred hHHHHHHCCCCEEEEEEecCHHHHHHHhCCCHHHHHHHHHHHH-------HHHHHCCCEEEEEEEECCCCCcCCHHHHHH
Confidence 46677889999999998 556788998887543333222 2345567777754211 011 233334
Q ss_pred HHHHHHHHhcCCCceEEEEE--ecCCCHHHHHHHHHHHHHHH
Q 044091 200 LVINVVETTKNNTRFQLIVA--VSYSGQYDLVQACQRIAMKV 239 (275)
Q Consensus 200 ~i~~~e~~T~~~~~~~lnia--i~YgGR~EIv~A~r~l~~~v 239 (275)
.++.+++.- --.|+|| +++.-=+++.+.++.+.+.+
T Consensus 174 ~~~~~~~~G----a~~i~l~DT~G~~~P~~v~~lv~~l~~~~ 211 (337)
T 3ble_A 174 LVEHLSKEH----IERIFLPDTLGVLSPEETFQGVDSLIQKY 211 (337)
T ss_dssp HHHHHHTSC----CSEEEEECTTCCCCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHcC----CCEEEEecCCCCcCHHHHHHHHHHHHHhc
Confidence 444343321 1255664 55666777777777666543
No 81
>3kh6_A Poly [ADP-ribose] polymerase 15; macro, PARP, BAL3, B-aggressive lymphoma protein 3, SGC, structural genomics consortium, alternative splicing; HET: APR; 2.20A {Homo sapiens} PDB: 3v2b_A*
Probab=42.40 E-value=61 Score=27.65 Aligned_cols=48 Identities=13% Similarity=0.090 Sum_probs=38.1
Q ss_pred HHHHHHHHHHHHHcCCCeEEEEeeecCCCCCCHHHHHHHHH-HHHHhHH
Q 044091 124 VKSLKTLVELCCKWGIRVLTVFAFSSDNWFRPEVEVEFLMS-LLESGVK 171 (275)
Q Consensus 124 ~~~l~eiv~wc~~~GI~~lTvYaFSteN~kRp~~EV~~Lm~-l~~~~l~ 171 (275)
.+.+.+.++.|.+.|++.|.+=+.|+.++.=|.+++..+|- .+.+++.
T Consensus 114 ~~~y~~~L~~a~~~~i~SIAfP~IgtG~~G~p~~~aa~i~~~~v~~fl~ 162 (199)
T 3kh6_A 114 RKTVTSVLEECEQRKYTSVSLPAIGTGNAGKNPITVADNIIDAIVDFSS 162 (199)
T ss_dssp HHHHHHHHHHHHHTTCCEEEECCTTSSTTCCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEeecccccCCCCcCHHHHHHHHHHHHHHHHH
Confidence 34566777888899999999999999999999999888763 3444443
No 82
>3sig_A PArg, poly(ADP-ribose) glycohydrolase; HET: AR6; 1.28A {Thermomonospora curvata} PDB: 3sih_A 3sii_A* 3sij_A
Probab=42.36 E-value=33 Score=31.00 Aligned_cols=41 Identities=12% Similarity=0.067 Sum_probs=38.0
Q ss_pred HHHHHHHHHHHHHcCCCeEEEEeeecCCCCCCHHHHHHHHH
Q 044091 124 VKSLKTLVELCCKWGIRVLTVFAFSSDNWFRPEVEVEFLMS 164 (275)
Q Consensus 124 ~~~l~eiv~wc~~~GI~~lTvYaFSteN~kRp~~EV~~Lm~ 164 (275)
.++++.+++.|.+.|++.|-+=||+...|.-|++||..++.
T Consensus 197 ~~rir~vL~iA~~~g~~~LVLGA~GCGvfgnpp~~VA~~~~ 237 (277)
T 3sig_A 197 RGRAAKVLAAARHHGHRRLVLGAWGCGVFGNDPAQVAETFA 237 (277)
T ss_dssp HHHHHHHHHHHHHTTCCEEEECCTTSSTTCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEECCcccCcCCCCHHHHHHHHH
Confidence 47788899999999999999999999999999999999775
No 83
>3can_A Pyruvate-formate lyase-activating enzyme; structural genomics, pyruvate-formate lyase-activating enzym MCSG, APC20359.1; 1.80A {Bacteroides vulgatus atcc 8482}
Probab=42.18 E-value=46 Score=26.63 Aligned_cols=25 Identities=12% Similarity=0.288 Sum_probs=15.8
Q ss_pred HHHHHHHHHHHHHc-CC-CeEEEEeee
Q 044091 124 VKSLKTLVELCCKW-GI-RVLTVFAFS 148 (275)
Q Consensus 124 ~~~l~eiv~wc~~~-GI-~~lTvYaFS 148 (275)
.+.+.++++|+.++ |+ ..+.+..|.
T Consensus 109 ~~~~~~~~~~~~~~~g~~~~~~l~~~~ 135 (182)
T 3can_A 109 EKNIKLSAEFLASLPRHPEIINLLPYH 135 (182)
T ss_dssp HHHHHHHHHHHHHSSSCCSEEEEEECC
T ss_pred HHHHHHHHHHHHhCcCccceEEEecCc
Confidence 45666667777776 66 666665553
No 84
>1bxb_A Xylose isomerase; xylose metabolism; 2.20A {Thermus thermophilus} SCOP: c.1.15.3 PDB: 1bxc_A
Probab=42.06 E-value=25 Score=32.25 Aligned_cols=67 Identities=6% Similarity=0.006 Sum_probs=38.2
Q ss_pred hhhhHHHHHHHHHHHHHcCCCeEEEEeeecCCCCCC-HHHHHHHHHHHHHhHHHHHHHhhcC--CcEEEEe
Q 044091 120 YEAGVKSLKTLVELCCKWGIRVLTVFAFSSDNWFRP-EVEVEFLMSLLESGVKEEKESFIRE--RIRISVI 187 (275)
Q Consensus 120 h~~G~~~l~eiv~wc~~~GI~~lTvYaFSteN~kRp-~~EV~~Lm~l~~~~l~~~~~~~~~~--~irvr~i 187 (275)
....++.+.+.++.|.++|++.+.++.-+ +-++.+ ......-++.+.+.|++..+...+. |+++-+-
T Consensus 111 r~~~i~~~~~~i~~A~~LGa~~vv~~~G~-~g~~~~~~~~~~~~~~~~~e~L~~l~~~a~~~g~gv~l~lE 180 (387)
T 1bxb_A 111 RAYALRKSLETMDLGAELGAEIYVVWPGR-EGAEVEATGKARKVWDWVREALNFMAAYAEDQGYGYRFALE 180 (387)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCEEEECCTT-CEESCGGGCGGGTHHHHHHHHHHHHHHHHHHHTCCCEEEEC
T ss_pred HHHHHHHHHHHHHHHHHhCCCEEEECCCC-CCccCCccCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEe
Confidence 45677899999999999999999886411 101111 0001112233344444444445555 7887663
No 85
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=41.42 E-value=1.9e+02 Score=25.91 Aligned_cols=105 Identities=14% Similarity=0.082 Sum_probs=71.0
Q ss_pred hHHHHHHHHHHHHHcCCCeEEEEeeecCCCCCCHHHHHHHHHHHHHhHHHHHHHhhcCCcEEEEecCCCCCCHHHHHHHH
Q 044091 123 GVKSLKTLVELCCKWGIRVLTVFAFSSDNWFRPEVEVEFLMSLLESGVKEEKESFIRERIRISVIGDTSKLPKCLEELVI 202 (275)
Q Consensus 123 G~~~l~eiv~wc~~~GI~~lTvYaFSteN~kRp~~EV~~Lm~l~~~~l~~~~~~~~~~~irvr~iGd~~~LP~~l~~~i~ 202 (275)
-.+.+.++++|..+.||.-+.+..-+.|.+.=+.+|...+++...+... ..+.|-+ |--+. .+.+.++
T Consensus 26 D~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~--------grvpVia-Gvg~~---~t~~ai~ 93 (311)
T 3h5d_A 26 NFDAIPALIEHLLAHHTDGILLAGTTAESPTLTHDEELELFAAVQKVVN--------GRVPLIA-GVGTN---DTRDSIE 93 (311)
T ss_dssp CTTHHHHHHHHHHHTTCCCEEESSTTTTGGGSCHHHHHHHHHHHHHHSC--------SSSCEEE-ECCCS---SHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhC--------CCCcEEE-eCCCc---CHHHHHH
Confidence 3577899999999999999999999999999999999998887665432 2334322 33221 2445555
Q ss_pred HHHHHhcCCC-ceEEEEEecC--CCHHHHHHHHHHHHHHH
Q 044091 203 NVVETTKNNT-RFQLIVAVSY--SGQYDLVQACQRIAMKV 239 (275)
Q Consensus 203 ~~e~~T~~~~-~~~lniai~Y--gGR~EIv~A~r~l~~~v 239 (275)
.+....+-.. +..+-+.=.| -+.+++++-.+.+++.+
T Consensus 94 la~~A~~~Ga~davlv~~P~y~~~s~~~l~~~f~~va~a~ 133 (311)
T 3h5d_A 94 FVKEVAEFGGFAAGLAIVPYYNKPSQEGMYQHFKAIADAS 133 (311)
T ss_dssp HHHHHHHSCCCSEEEEECCCSSCCCHHHHHHHHHHHHHSC
T ss_pred HHHHHHhcCCCcEEEEcCCCCCCCCHHHHHHHHHHHHHhC
Confidence 5554444332 4444443333 46799999999998753
No 86
>2jyc_A Uncharacterized protein C6ORF130; macro domain, A1PP domain, BC011709, protein structure initiative, PSI-2; NMR {Homo sapiens} PDB: 2lgr_A
Probab=41.41 E-value=91 Score=25.37 Aligned_cols=41 Identities=20% Similarity=0.143 Sum_probs=35.0
Q ss_pred HHHHHHHHHHHHHcCCCeEEEEeeecCCCCCCHHHHHHHHH
Q 044091 124 VKSLKTLVELCCKWGIRVLTVFAFSSDNWFRPEVEVEFLMS 164 (275)
Q Consensus 124 ~~~l~eiv~wc~~~GI~~lTvYaFSteN~kRp~~EV~~Lm~ 164 (275)
...+.++++.|.+.|++.|.+=+.|+.++.=|.+++..+|.
T Consensus 105 ~~~l~~~l~~a~~~~~~sIa~P~IgtGi~G~p~~~v~~ii~ 145 (160)
T 2jyc_A 105 QKSLEAMKSHCLKNGVTDLSMPRIGCGLDRLQWENVSAMIE 145 (160)
T ss_dssp HHHHHHHHHHHHHHTCCEEEEESCCSSCSSSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCHHHHHHHHH
Confidence 35566677778889999999999999999999999988765
No 87
>1q1v_A DEK protein; winged-helix motif, DNA binding protein; NMR {Homo sapiens} SCOP: a.159.4.1
Probab=41.33 E-value=23 Score=25.48 Aligned_cols=40 Identities=15% Similarity=0.266 Sum_probs=31.7
Q ss_pred CCHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHhhhhcCCCCCCCCcE
Q 044091 223 SGQYDLVQACQRIAMKVKDGLIEPNDVSESLIEQELETNCTEFPYPDL 270 (275)
Q Consensus 223 gGR~EIv~A~r~l~~~v~~g~l~~edI~e~~i~~~L~t~~~~~PdPDL 270 (275)
-+.+||..+++.+... .+.+.+|...|.+.|.. .+|..||
T Consensus 12 Psd~ei~~~I~~IL~~-----aDL~tvT~K~VR~~Le~---~~pg~dL 51 (70)
T 1q1v_A 12 PTDEELKETIKKLLAS-----ANLEEVTMKQICKKVYE---NYPTYDL 51 (70)
T ss_dssp CCHHHHHHHHHHHHTT-----SCGGGCCHHHHHHHHHH---HCSSSCC
T ss_pred cCHHHHHHHHHHHHHh-----CCHHHHhHHHHHHHHHH---HccCCCC
Confidence 3578999999998753 46788999999999976 4566776
No 88
>4abl_A Poly [ADP-ribose] polymerase 14; transferase, PARP14; 1.15A {Homo sapiens} PDB: 4abk_A
Probab=41.26 E-value=59 Score=27.24 Aligned_cols=48 Identities=17% Similarity=0.146 Sum_probs=38.1
Q ss_pred HHHHHHHHHHHHHcCCCeEEEEeeecCCCCCCHHHHHHHH-HHHHHhHH
Q 044091 124 VKSLKTLVELCCKWGIRVLTVFAFSSDNWFRPEVEVEFLM-SLLESGVK 171 (275)
Q Consensus 124 ~~~l~eiv~wc~~~GI~~lTvYaFSteN~kRp~~EV~~Lm-~l~~~~l~ 171 (275)
.+...+.++.|.+.|++.|.+=+.|+.++.=|.+++..+| +.+.+++.
T Consensus 103 ~~~y~~~L~~a~~~~~~SIAfP~IstG~~g~p~~~aa~i~~~~v~~fl~ 151 (183)
T 4abl_A 103 KSSVSSVLQECEKKNYSSICLPAIGTGNAKQHPDKVAEAIIDAIEDFVQ 151 (183)
T ss_dssp HHHHHHHHHHHHHTTCCEEEECCTTSSTTCCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCeEeeccccCCCCCcCHHHHHHHHHHHHHHHHH
Confidence 3556677888899999999999999999999999988765 33444443
No 89
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=40.78 E-value=2e+02 Score=26.18 Aligned_cols=101 Identities=8% Similarity=-0.049 Sum_probs=67.7
Q ss_pred hhHHHHHHHHHHHHHcCCCeEEEEeeecCCCCCCHHHHHHHHHHHHHhHHHHHHHhhcCCcEEEEecCCCCCCHHHHHHH
Q 044091 122 AGVKSLKTLVELCCKWGIRVLTVFAFSSDNWFRPEVEVEFLMSLLESGVKEEKESFIRERIRISVIGDTSKLPKCLEELV 201 (275)
Q Consensus 122 ~G~~~l~eiv~wc~~~GI~~lTvYaFSteN~kRp~~EV~~Lm~l~~~~l~~~~~~~~~~~irvr~iGd~~~LP~~l~~~i 201 (275)
--.+.+.++++|..+.||.-|.+..-+.|.+.-+.+|...+++. .. ...+.|- +|-.+.=-.+..+..
T Consensus 44 ID~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~---~~--------~grvpVi-aGvg~~st~eai~la 111 (344)
T 2hmc_A 44 PDFDALVRKGKELIADGMSAVVYCGSMGDWPLLTDEQRMEGVER---LV--------KAGIPVI-VGTGAVNTASAVAHA 111 (344)
T ss_dssp BCHHHHHHHHHHHHHTTCCCEEESSGGGTGGGSCHHHHHHHHHH---HH--------HTTCCEE-EECCCSSHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEeCccCcChhhCCHHHHHHHHHH---Hh--------CCCCcEE-EecCCCCHHHHHHHH
Confidence 34688999999999999999999998899999999999998886 11 1233332 333322123334444
Q ss_pred HHHHHHhcCCCceEEEEEecC---CCHHHHHHHHHHHHH
Q 044091 202 INVVETTKNNTRFQLIVAVSY---SGQYDLVQACQRIAM 237 (275)
Q Consensus 202 ~~~e~~T~~~~~~~lniai~Y---gGR~EIv~A~r~l~~ 237 (275)
+.+++. .-+..+.+.=.| -+.++|++-.+.+++
T Consensus 112 ~~A~~~---Gadavlv~~P~y~~~~s~~~l~~~f~~IA~ 147 (344)
T 2hmc_A 112 VHAQKV---GAKGLMVIPRVLSRGSVIAAQKAHFKAILS 147 (344)
T ss_dssp HHHHHH---TCSEEEECCCCSSSTTCHHHHHHHHHHHHH
T ss_pred HHHHhc---CCCEEEECCCccCCCCCHHHHHHHHHHHHh
Confidence 444443 344444444344 367999999999987
No 90
>3rmj_A 2-isopropylmalate synthase; LEUA, truncation, neisseria MENI TIM barrel, catalytic domain, dimer, leucine biosynthesis, ketoisovalerate; 1.95A {Neisseria meningitidis}
Probab=39.77 E-value=2.3e+02 Score=26.19 Aligned_cols=104 Identities=13% Similarity=0.032 Sum_probs=63.4
Q ss_pred HHHHHHHHHHHHcCCCeEEEEe-----eecCCCCCCHHHHHHHHHHHHHhHHHHHHHhhcCCcEEEEec-CCCCCC-HHH
Q 044091 125 KSLKTLVELCCKWGIRVLTVFA-----FSSDNWFRPEVEVEFLMSLLESGVKEEKESFIRERIRISVIG-DTSKLP-KCL 197 (275)
Q Consensus 125 ~~l~eiv~wc~~~GI~~lTvYa-----FSteN~kRp~~EV~~Lm~l~~~~l~~~~~~~~~~~irvr~iG-d~~~LP-~~l 197 (275)
+.+...+++....|++.+.+|. |...|++++.+|+-..+.-..++ ..+.+..+.+-. |...-+ +.+
T Consensus 87 ~di~~a~~al~~ag~~~v~if~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~-------a~~~g~~v~~~~ed~~r~~~~~~ 159 (370)
T 3rmj_A 87 RDIRQAGEAVAPAPKKRIHTFIATSPIHMEYKLKMKPKQVIEAAVKAVKI-------AREYTDDVEFSCEDALRSEIDFL 159 (370)
T ss_dssp HHHHHHHHHHTTSSSEEEEEEEECSHHHHHHTTCCCHHHHHHHHHHHHHH-------HTTTCSCEEEEEETGGGSCHHHH
T ss_pred HHHHHHHHHHhhCCCCEEEEEecCcHHHHHHHhCCCHHHHHHHHHHHHHH-------HHHcCCEEEEecCCCCccCHHHH
Confidence 3345566677779999999997 33468999999866554433332 344566665533 222333 444
Q ss_pred HHHHHHHHHHhcCCCceEEEEE--ecCCCHHHHHHHHHHHHHHH
Q 044091 198 EELVINVVETTKNNTRFQLIVA--VSYSGQYDLVQACQRIAMKV 239 (275)
Q Consensus 198 ~~~i~~~e~~T~~~~~~~lnia--i~YgGR~EIv~A~r~l~~~v 239 (275)
.+.++.+++.-. -.|+|| ++|.-=.++.+.++.+.+.+
T Consensus 160 ~~~~~~~~~~Ga----~~i~l~DT~G~~~P~~~~~lv~~l~~~~ 199 (370)
T 3rmj_A 160 AEICGAVIEAGA----TTINIPDTVGYSIPYKTEEFFRELIAKT 199 (370)
T ss_dssp HHHHHHHHHHTC----CEEEEECSSSCCCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHcCC----CEEEecCccCCcCHHHHHHHHHHHHHhC
Confidence 555555555533 256776 56666777777777776543
No 91
>3ivs_A Homocitrate synthase, mitochondrial; TIM barrel, metalloprotein, transferase, claisen condensatio acid biosynthesis; 2.24A {Schizosaccharomyces pombe} PDB: 3ivt_A* 3ivu_A* 3mi3_A*
Probab=39.01 E-value=2.2e+02 Score=27.04 Aligned_cols=97 Identities=10% Similarity=-0.016 Sum_probs=53.2
Q ss_pred HHHHHHcCCCeEEEEee-----ecCCCCCCHHHHHHHHHHHHHhHHHHHHHhhcCCcEEEEec-CCCCCC-HHHHHHHHH
Q 044091 131 VELCCKWGIRVLTVFAF-----SSDNWFRPEVEVEFLMSLLESGVKEEKESFIRERIRISVIG-DTSKLP-KCLEELVIN 203 (275)
Q Consensus 131 v~wc~~~GI~~lTvYaF-----SteN~kRp~~EV~~Lm~l~~~~l~~~~~~~~~~~irvr~iG-d~~~LP-~~l~~~i~~ 203 (275)
++++.+.|++.|.+|.= ...|++++.+|+-..+.-.. ....+.|..|++.. |-..-+ +.+.+.++.
T Consensus 116 i~~A~~aG~~~V~i~~s~Sd~~~~~~l~~s~~e~l~~~~~~v-------~~ak~~G~~V~~~~eda~r~d~~~~~~v~~~ 188 (423)
T 3ivs_A 116 ARVAVETGVDGVDVVIGTSQYLRKYSHGKDMTYIIDSATEVI-------NFVKSKGIEVRFSSEDSFRSDLVDLLSLYKA 188 (423)
T ss_dssp HHHHHHTTCSEEEEEEEC-------------CHHHHHHHHHH-------HHHHTTTCEEEEEEESGGGSCHHHHHHHHHH
T ss_pred HHHHHHcCCCEEEEEeeccHHHHHHHcCCCHHHHHHHHHHHH-------HHHHHCCCEEEEEEccCcCCCHHHHHHHHHH
Confidence 36677889999999953 33467777776554333222 23456788888753 333333 444555555
Q ss_pred HHHHhcCCCceEEEEE--ecCCCHHHHHHHHHHHHHH
Q 044091 204 VVETTKNNTRFQLIVA--VSYSGQYDLVQACQRIAMK 238 (275)
Q Consensus 204 ~e~~T~~~~~~~lnia--i~YgGR~EIv~A~r~l~~~ 238 (275)
+.+...+ .|+|| +++.-=.++.+.++.+.+.
T Consensus 189 ~~~~Ga~----~i~l~DTvG~~~P~~v~~lv~~l~~~ 221 (423)
T 3ivs_A 189 VDKIGVN----RVGIADTVGCATPRQVYDLIRTLRGV 221 (423)
T ss_dssp HHHHCCS----EEEEEETTSCCCHHHHHHHHHHHHHH
T ss_pred HHHhCCC----ccccCCccCcCCHHHHHHHHHHHHhh
Confidence 6654332 57777 5666667777777776543
No 92
>3g8r_A Probable spore coat polysaccharide biosynthesis P; structural genomics, protein structure initiative; 2.49A {Chromobacterium violaceum atcc 12472}
Probab=38.64 E-value=2.1e+02 Score=26.54 Aligned_cols=85 Identities=14% Similarity=0.123 Sum_probs=57.9
Q ss_pred hhHHHHHHHHHHHHHcCCCeEEEEeeecCCCCCCHHHHHHHHHHHHHhHHHHHHHhhcCCcEEEEecCCCCCCHHHHHHH
Q 044091 122 AGVKSLKTLVELCCKWGIRVLTVFAFSSDNWFRPEVEVEFLMSLLESGVKEEKESFIRERIRISVIGDTSKLPKCLEELV 201 (275)
Q Consensus 122 ~G~~~l~eiv~wc~~~GI~~lTvYaFSteN~kRp~~EV~~Lm~l~~~~l~~~~~~~~~~~irvr~iGd~~~LP~~l~~~i 201 (275)
-|.+.+.++.++|.+.||..+|- .|+. +-|+. +.+.++.+-=||..+.---.+.+.+
T Consensus 75 l~~e~~~~L~~~~~~~Gi~~~st-~fD~-------~svd~---------------l~~~~v~~~KI~S~~~~N~pLL~~v 131 (350)
T 3g8r_A 75 LQPEQMQKLVAEMKANGFKAICT-PFDE-------ESVDL---------------IEAHGIEIIKIASCSFTDWPLLERI 131 (350)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEE-ECSH-------HHHHH---------------HHHTTCCEEEECSSSTTCHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCcEEec-cCCH-------HHHHH---------------HHHcCCCEEEECcccccCHHHHHHH
Confidence 57788999999999999999885 4532 22332 3345666666787776665565554
Q ss_pred HHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHH
Q 044091 202 INVVETTKNNTRFQLIVAVSYSGQYDLVQACQRIAM 237 (275)
Q Consensus 202 ~~~e~~T~~~~~~~lniai~YgGR~EIv~A~r~l~~ 237 (275)
. .++.-|.+.-+-+.-+||..|+.-+.+
T Consensus 132 a--------~~gKPviLstGmstl~Ei~~Ave~i~~ 159 (350)
T 3g8r_A 132 A--------RSDKPVVASTAGARREDIDKVVSFMLH 159 (350)
T ss_dssp H--------TSCSCEEEECTTCCHHHHHHHHHHHHT
T ss_pred H--------hhCCcEEEECCCCCHHHHHHHHHHHHH
Confidence 4 234455566666799999999887753
No 93
>1exn_A 5'-exonuclease, 5'-nuclease; hydrolase; 2.50A {Enterobacteria phage T5} SCOP: a.60.7.1 c.120.1.2 PDB: 1ut5_A 1ut8_A 1xo1_A
Probab=38.41 E-value=30 Score=31.37 Aligned_cols=66 Identities=17% Similarity=0.112 Sum_probs=41.3
Q ss_pred CCCEEEEEecCCchHHHHcCCCCCcchhhhHH------------H-HHHHHHHHHH--cCCCeEEEEeeecCCCCCCHHH
Q 044091 94 MPRHVAVIMDGNRRWAHLRGLPVGSGYEAGVK------------S-LKTLVELCCK--WGIRVLTVFAFSSDNWFRPEVE 158 (275)
Q Consensus 94 iPrHIAiImDGNRRwAk~~gl~~~~Gh~~G~~------------~-l~eiv~wc~~--~GI~~lTvYaFSteN~kRp~~E 158 (275)
-|.|++++.||.+.-=|..-.+...+++.... . +..+-+++.. +||+.+..-. -|
T Consensus 58 ~p~~~vvvFD~~~~tfR~~~~~~YKa~R~~~p~~~~~~~e~L~~q~~~~ikell~~~~~gip~i~~~g----------~E 127 (290)
T 1exn_A 58 SARTTIVLGDKGKSVFRLEHLPEYKGNRDEKYAQRTEEEKALDEQFFEYLKDAFELCKTTFPTFTIRG----------VE 127 (290)
T ss_dssp TEEEEEEECCBSCCHHHHHHCTTTTHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHTTTSCEECCTT----------BC
T ss_pred CCCeEEEEEcCCCchhhhhCcHHHHcCCCCCCccccccchhHHHhhHHHHHHHHHhhCCCCcEEEECC----------cC
Confidence 38999999996544333434666777777654 2 4445555555 8999876522 25
Q ss_pred HHHHHHHHHHh
Q 044091 159 VEFLMSLLESG 169 (275)
Q Consensus 159 V~~Lm~l~~~~ 169 (275)
=++++.-+...
T Consensus 128 ADDviatLa~~ 138 (290)
T 1exn_A 128 ADDMAAYIVKL 138 (290)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 66666655543
No 94
>2qw5_A Xylose isomerase-like TIM barrel; putative sugar phosphate isomerase/epimerase; 1.78A {Anabaena variabilis atcc 29413}
Probab=38.06 E-value=74 Score=27.87 Aligned_cols=69 Identities=9% Similarity=0.055 Sum_probs=41.8
Q ss_pred chhhhHHHHHHHHHHHHHcCCCeEEEEeeecCC-CC-C-C-----HHH----HHHHHHHHHHhHHHHHHHhhcCCcEEEE
Q 044091 119 GYEAGVKSLKTLVELCCKWGIRVLTVFAFSSDN-WF-R-P-----EVE----VEFLMSLLESGVKEEKESFIRERIRISV 186 (275)
Q Consensus 119 Gh~~G~~~l~eiv~wc~~~GI~~lTvYaFSteN-~k-R-p-----~~E----V~~Lm~l~~~~l~~~~~~~~~~~irvr~ 186 (275)
.....++.+.+.++.|.++|++.|....+|.-. +. . + ..+ .+.-++.+.+.|++..+...+.||++-+
T Consensus 103 ~r~~~~~~~~~~i~~A~~lG~~~v~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~l 182 (335)
T 2qw5_A 103 QRQEALEYLKSRVDITAALGGEIMMGPIVIPYGVFPTTDFNEPIWSDELQEHLKVRYANAQPILDKLGEYAEIKKVKLAI 182 (335)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCSEEEECCSSCTTCCCBCTTCCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHHHHHHHHHHHHcCCCEEeccccCccccccCCcccccccccchhhhHHHHHHHHHHHHHHHHHHHHHcCCEEEE
Confidence 345678899999999999999999321122111 11 1 1 011 2233445555666656667778998877
Q ss_pred e
Q 044091 187 I 187 (275)
Q Consensus 187 i 187 (275)
-
T Consensus 183 E 183 (335)
T 2qw5_A 183 E 183 (335)
T ss_dssp C
T ss_pred e
Confidence 3
No 95
>1xim_A D-xylose isomerase; isomerase(intramolecular oxidoreductse); HET: XYL; 2.20A {Actinoplanes missouriensis} SCOP: c.1.15.3 PDB: 4xim_A 5xim_A* 6xim_A* 7xim_A 8xim_A* 9xim_A* 3xin_A 2xim_A* 5xin_A* 1xin_A* 1bhw_A* 2xin_A* 3xim_A*
Probab=36.89 E-value=53 Score=30.05 Aligned_cols=66 Identities=6% Similarity=0.071 Sum_probs=40.7
Q ss_pred hhhhHHHHHHHHHHHHHcCCCeEEEEeeec-CC--CCCCHHHHHHHHHHHHHhHHHHHHHhhcC--CcEEEEec
Q 044091 120 YEAGVKSLKTLVELCCKWGIRVLTVFAFSS-DN--WFRPEVEVEFLMSLLESGVKEEKESFIRE--RIRISVIG 188 (275)
Q Consensus 120 h~~G~~~l~eiv~wc~~~GI~~lTvYaFSt-eN--~kRp~~EV~~Lm~l~~~~l~~~~~~~~~~--~irvr~iG 188 (275)
....++.+.+.++.|.++|++.|.++.=+. -+ ...+. ..-++.+.+.|++..+...+. |+++-+--
T Consensus 111 r~~~i~~~~~~i~~A~~LGa~~vv~~~G~~g~~~~~~~~~---~~~~~~~~e~L~~l~~~A~~~g~gv~l~lE~ 181 (393)
T 1xim_A 111 RRYAIRKVLRQMDLGAELGAKTLVLWGGREGAEYDSAKDV---SAALDRYREALNLLAQYSEDRGYGLRFAIEP 181 (393)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCEEEEECTTSEESSGGGCCH---HHHHHHHHHHHHHHHHHHHHHTCCCEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHhCCCEEEECCCCCCCcCCccCCH---HHHHHHHHHHHHHHHHHHHhcCCCcEEEEec
Confidence 456778999999999999999998865110 00 11122 222344455555555555555 78877643
No 96
>1xla_A D-xylose isomerase; isomerase(intramolecular oxidoreductase); 2.30A {Arthrobacter SP} SCOP: c.1.15.3 PDB: 1die_A* 1did_A 1xlb_A 1xlc_A* 1xld_A* 1xle_A 1xlf_A* 1xlg_A* 1xlh_A 1xli_A* 1xlj_A* 1xlk_A 1xll_A 1xlm_A* 4xia_A* 5xia_A*
Probab=36.03 E-value=45 Score=30.57 Aligned_cols=65 Identities=9% Similarity=0.155 Sum_probs=42.3
Q ss_pred chhhhHHHHHHHHHHHHHcCCCeEEEEeeec-CC--CCCCHHHHHHHHHHHHHhHHHHHHHhhcCC--cEEEE
Q 044091 119 GYEAGVKSLKTLVELCCKWGIRVLTVFAFSS-DN--WFRPEVEVEFLMSLLESGVKEEKESFIRER--IRISV 186 (275)
Q Consensus 119 Gh~~G~~~l~eiv~wc~~~GI~~lTvYaFSt-eN--~kRp~~EV~~Lm~l~~~~l~~~~~~~~~~~--irvr~ 186 (275)
-....++.+.+.++.|.++|++.+.++.-+. .+ ...+ .+.-++.+.+.|++..+...+.| |+|-+
T Consensus 110 ~r~~~i~~~~~~i~~A~~LGa~~vvv~~G~~g~~~~~~~~---~~~~~~~~~e~L~~l~~~A~~~G~~v~l~l 179 (394)
T 1xla_A 110 IRRFALAKVLHNIDLAAEMGAETFVMWGGREGSEYDGSKD---LAAALDRMREGVDTAAGYIKDKGYNLRIAL 179 (394)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCSEEEECCTTCEESSGGGCC---HHHHHHHHHHHHHHHHHHHHHHTCCCEEEE
T ss_pred HHHHHHHHHHHHHHHHHHhCCCEEEECCCCCccccccccC---HHHHHHHHHHHHHHHHHHHHhcCCCeEEEE
Confidence 3456788999999999999999999864211 00 0122 22334555666666566666778 87765
No 97
>1xho_A Chorismate mutase; southeast collaboratory for structural genomics, secsg, protein structure initiative, PSI, structural genomics; 2.20A {Clostridium thermocellum} SCOP: d.79.1.2
Probab=35.69 E-value=25 Score=29.11 Aligned_cols=33 Identities=18% Similarity=0.301 Sum_probs=26.5
Q ss_pred EEEecCCCHHHHHHHHHHHHHHH-hcCCCCCCCC
Q 044091 217 IVAVSYSGQYDLVQACQRIAMKV-KDGLIEPNDV 249 (275)
Q Consensus 217 niai~YgGR~EIv~A~r~l~~~v-~~g~l~~edI 249 (275)
=+.+.-+.+++|.+|+++|.+++ +.+.++++||
T Consensus 38 AtTve~Nt~e~I~~At~ELl~eii~~N~l~~eDI 71 (148)
T 1xho_A 38 ATTVSDNTADEIVAETQKLLKEMAEKNGLEEDDI 71 (148)
T ss_dssp EEECSSSSHHHHHHHHHHHHHHHHHHTTCCGGGE
T ss_pred eeEcCCCCHHHHHHHHHHHHHHHHHHcCCCHHHE
Confidence 35567899999999999997664 5688888775
No 98
>4grd_A N5-CAIR mutase, phosphoribosylaminoimidazole carboxylase catalyti; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures; 1.85A {Burkholderia cenocepacia}
Probab=34.72 E-value=1.9e+02 Score=24.34 Aligned_cols=69 Identities=17% Similarity=0.218 Sum_probs=44.6
Q ss_pred EEEEEecCCchHHHHcCCCCCcchhhhHHHHHHHHHHHHHcCCCeEEEEeeecCCCCCCHHHHHHHHHHHHHhHHHHHHH
Q 044091 97 HVAVIMDGNRRWAHLRGLPVGSGYEAGVKSLKTLVELCCKWGIRVLTVFAFSSDNWFRPEVEVEFLMSLLESGVKEEKES 176 (275)
Q Consensus 97 HIAiImDGNRRwAk~~gl~~~~Gh~~G~~~l~eiv~wc~~~GI~~lTvYaFSteN~kRp~~EV~~Lm~l~~~~l~~~~~~ 176 (275)
-|||||-+. --+..+.+....+.++||+ |..-.----|.++++..+.+ .
T Consensus 14 ~V~IimGS~----------------SD~~v~~~a~~~l~~~gi~----~ev~V~saHR~p~~l~~~~~-----------~ 62 (173)
T 4grd_A 14 LVGVLMGSS----------------SDWDVMKHAVAILQEFGVP----YEAKVVSAHRMPDEMFDYAE-----------K 62 (173)
T ss_dssp SEEEEESSG----------------GGHHHHHHHHHHHHHTTCC----EEEEECCTTTSHHHHHHHHH-----------H
T ss_pred eEEEEeCcH----------------hHHHHHHHHHHHHHHcCCC----EEEEEEccccCHHHHHHHHH-----------H
Confidence 499999863 3367788888888999999 44444445788876554332 2
Q ss_pred hhcCCcEEEE--ecCCCCCCHH
Q 044091 177 FIRERIRISV--IGDTSKLPKC 196 (275)
Q Consensus 177 ~~~~~irvr~--iGd~~~LP~~ 196 (275)
...+|++|-+ -|--..||.-
T Consensus 63 a~~~g~~ViIa~AG~aahLpgv 84 (173)
T 4grd_A 63 ARERGLRAIIAGAGGAAHLPGM 84 (173)
T ss_dssp HTTTTCSEEEEEEESSCCHHHH
T ss_pred HHhcCCeEEEEeccccccchhh
Confidence 3445555544 4566666653
No 99
>2xd7_A Core histone macro-H2A.2; chromosomal protein, nucleosome core, chromatin regulator, nucleus, DNA-binding protein, phosphoprotein; 2.09A {Homo sapiens}
Probab=34.48 E-value=1.1e+02 Score=25.55 Aligned_cols=46 Identities=9% Similarity=0.114 Sum_probs=35.8
Q ss_pred HHHHHHHHHHHHcCCCeEEEEeeecCCCCCCHHHHHHHH-HHHHHhH
Q 044091 125 KSLKTLVELCCKWGIRVLTVFAFSSDNWFRPEVEVEFLM-SLLESGV 170 (275)
Q Consensus 125 ~~l~eiv~wc~~~GI~~lTvYaFSteN~kRp~~EV~~Lm-~l~~~~l 170 (275)
+...+.++.+.+.|++.|.+=++|+.++.=|.+++..+| +.+.+++
T Consensus 116 ~~y~~~L~~a~~~~~~SIAfP~IstG~~g~p~~~aa~i~~~~v~~~l 162 (193)
T 2xd7_A 116 ETIKNCLSAAEDKKLKSVAFPPFPSGRNCFPKQTAAQVTLKAISAHF 162 (193)
T ss_dssp HHHHHHHHHHHHTTCSEEEECCCCCSTTCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEeccccCCCCCCCHHHHHHHHHHHHHHHH
Confidence 445566677778899999999999999999999988766 3334443
No 100
>3ors_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase, isomerase,biosynthetic protein; 1.45A {Staphylococcus aureus subsp}
Probab=34.37 E-value=2e+02 Score=23.95 Aligned_cols=68 Identities=21% Similarity=0.220 Sum_probs=44.6
Q ss_pred EEEEEecCCchHHHHcCCCCCcchhhhHHHHHHHHHHHHHcCCCeEEEEeeecCCCCCCHHHHHHHHHHHHHhHHHHHHH
Q 044091 97 HVAVIMDGNRRWAHLRGLPVGSGYEAGVKSLKTLVELCCKWGIRVLTVFAFSSDNWFRPEVEVEFLMSLLESGVKEEKES 176 (275)
Q Consensus 97 HIAiImDGNRRwAk~~gl~~~~Gh~~G~~~l~eiv~wc~~~GI~~lTvYaFSteN~kRp~~EV~~Lm~l~~~~l~~~~~~ 176 (275)
.|+|||-+- --+..+.+....+.++||+ |..-.----|.++++..+.+ .
T Consensus 5 ~V~Iimgs~----------------SD~~v~~~a~~~l~~~gi~----~ev~V~SaHR~p~~~~~~~~-----------~ 53 (163)
T 3ors_A 5 KVAVIMGSS----------------SDWKIMQESCNMLDYFEIP----YEKQVVSAHRTPKMMVQFAS-----------E 53 (163)
T ss_dssp CEEEEESCG----------------GGHHHHHHHHHHHHHTTCC----EEEEECCTTTSHHHHHHHHH-----------H
T ss_pred eEEEEECcH----------------HHHHHHHHHHHHHHHcCCC----EEEEEECCcCCHHHHHHHHH-----------H
Confidence 499999863 3367788888889999999 55544456788887655433 2
Q ss_pred hhcCCcEEEE--ecCCCCCCH
Q 044091 177 FIRERIRISV--IGDTSKLPK 195 (275)
Q Consensus 177 ~~~~~irvr~--iGd~~~LP~ 195 (275)
+.+++++|-+ -|--..||.
T Consensus 54 a~~~g~~ViIa~AG~aa~Lpg 74 (163)
T 3ors_A 54 ARERGINIIIAGAGGAAHLPG 74 (163)
T ss_dssp TTTTTCCEEEEEEESSCCHHH
T ss_pred HHhCCCcEEEEECCchhhhHH
Confidence 3445555444 455566665
No 101
>1spv_A Putative polyprotein/phosphatase; structural genomoics, alpha/beta monomeric protein, structural genomics, PSI, protein structure initiative; HET: MES; 2.00A {Escherichia coli} SCOP: c.50.1.2
Probab=34.24 E-value=1e+02 Score=25.56 Aligned_cols=46 Identities=9% Similarity=0.040 Sum_probs=36.0
Q ss_pred HHHHHHHHHHHHcCCCeEEEEeeecCCCCCCHHHHHHHH-HHHHHhH
Q 044091 125 KSLKTLVELCCKWGIRVLTVFAFSSDNWFRPEVEVEFLM-SLLESGV 170 (275)
Q Consensus 125 ~~l~eiv~wc~~~GI~~lTvYaFSteN~kRp~~EV~~Lm-~l~~~~l 170 (275)
+...+.++.+.+.|++.|.+=+.|+.++.=|.+++..+| +.+.+++
T Consensus 99 ~~y~~~L~~a~~~~~~SIAfP~IstG~~g~p~~~aa~i~~~~v~~~l 145 (184)
T 1spv_A 99 DAYLNSLRLVAANSYTSVAFPAISTGVYGYPRAAAAEIAVKTVSEFI 145 (184)
T ss_dssp HHHHHHHHHHHHTTCSEEEECCTTSSTTCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCceEEeccccCCCCCCCHHHHHHHHHHHHHHHH
Confidence 445667777778899999999999999999999988765 3334433
No 102
>1xmp_A PURE, phosphoribosylaminoimidazole carboxylase; purine biosynthesis, spine, lyase; 1.80A {Bacillus anthracis} SCOP: c.23.8.1
Probab=33.43 E-value=2.1e+02 Score=24.00 Aligned_cols=68 Identities=15% Similarity=0.179 Sum_probs=44.1
Q ss_pred EEEEEecCCchHHHHcCCCCCcchhhhHHHHHHHHHHHHHcCCCeEEEEeeecCCCCCCHHHHHHHHHHHHHhHHHHHHH
Q 044091 97 HVAVIMDGNRRWAHLRGLPVGSGYEAGVKSLKTLVELCCKWGIRVLTVFAFSSDNWFRPEVEVEFLMSLLESGVKEEKES 176 (275)
Q Consensus 97 HIAiImDGNRRwAk~~gl~~~~Gh~~G~~~l~eiv~wc~~~GI~~lTvYaFSteN~kRp~~EV~~Lm~l~~~~l~~~~~~ 176 (275)
.|+|||-+. --+..+.+....+.++||+ |..-.----|.++++..+.+ .
T Consensus 13 ~V~IimGS~----------------SD~~v~~~a~~~L~~~Gi~----~dv~V~SaHR~p~~l~~~~~-----------~ 61 (170)
T 1xmp_A 13 LVGVIMGST----------------SDWETMKYACDILDELNIP----YEKKVVSAHRTPDYMFEYAE-----------T 61 (170)
T ss_dssp SEEEEESSG----------------GGHHHHHHHHHHHHHTTCC----EEEEECCTTTSHHHHHHHHH-----------H
T ss_pred cEEEEECcH----------------HHHHHHHHHHHHHHHcCCC----EEEEEEeccCCHHHHHHHHH-----------H
Confidence 499999863 3357788888888999999 55544456788887644332 2
Q ss_pred hhcCCcEEEE--ecCCCCCCH
Q 044091 177 FIRERIRISV--IGDTSKLPK 195 (275)
Q Consensus 177 ~~~~~irvr~--iGd~~~LP~ 195 (275)
+.++|++|-+ -|--..||.
T Consensus 62 a~~~g~~ViIa~AG~aa~Lpg 82 (170)
T 1xmp_A 62 ARERGLKVIIAGAGGAAHLPG 82 (170)
T ss_dssp TTTTTCCEEEEEEESSCCHHH
T ss_pred HHhCCCcEEEEECCchhhhHH
Confidence 3445555544 455555664
No 103
>2x7v_A Probable endonuclease 4; DNA repair protein, metal-binding, hydrolase, DNA damage, DN; 2.30A {Thermotoga maritima MSB8} PDB: 2x7w_A*
Probab=33.10 E-value=1.3e+02 Score=25.18 Aligned_cols=62 Identities=29% Similarity=0.305 Sum_probs=37.7
Q ss_pred hhhhHHHHHHHHHHHHHcCCCeEEEEeeecCCCCCCHHHHHHHHHHHHHhHHHHHHHhhcCCcEEEEec
Q 044091 120 YEAGVKSLKTLVELCCKWGIRVLTVFAFSSDNWFRPEVEVEFLMSLLESGVKEEKESFIRERIRISVIG 188 (275)
Q Consensus 120 h~~G~~~l~eiv~wc~~~GI~~lTvYaFSteN~kRp~~EV~~Lm~l~~~~l~~~~~~~~~~~irvr~iG 188 (275)
..+..+.+.+.++.|.++|++.|.+..-+.. ..+.+| -++.+.+.|++..+ ...|+++-+--
T Consensus 84 r~~~~~~~~~~i~~A~~lG~~~v~~~~g~~~--~~~~~~---~~~~~~~~l~~l~~--~~~gv~l~lEn 145 (287)
T 2x7v_A 84 WQKSVELLKKEVEICRKLGIRYLNIHPGSHL--GTGEEE---GIDRIVRGLNEVLN--NTEGVVILLEN 145 (287)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCEEEECCEECT--TSCHHH---HHHHHHHHHHHHHT--TCCSCEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEEecCCCC--CCCHHH---HHHHHHHHHHHHHc--ccCCCEEEEeC
Confidence 3566889999999999999999988654332 223332 12233333333222 12688887743
No 104
>3aam_A Endonuclease IV, endoiv; DNA repair, base excision repair, BER, TIM barrel, endonucle hydrolase, structural genomics, NPPSFA; 1.58A {Thermus thermophilus}
Probab=32.86 E-value=1.2e+02 Score=25.37 Aligned_cols=58 Identities=21% Similarity=0.135 Sum_probs=39.8
Q ss_pred chhhhHHHHHHHHHHHHHcCCCeEEEEeeecCCCCCCHHHHHHHHHHHHHhHHHHHHHhh-cCCcEEEEec
Q 044091 119 GYEAGVKSLKTLVELCCKWGIRVLTVFAFSSDNWFRPEVEVEFLMSLLESGVKEEKESFI-RERIRISVIG 188 (275)
Q Consensus 119 Gh~~G~~~l~eiv~wc~~~GI~~lTvYaFSteN~kRp~~EV~~Lm~l~~~~l~~~~~~~~-~~~irvr~iG 188 (275)
-....++.+.+.++.|.++|++.+.+..-+. .. +.+.+.+++..+... +.|+++-+--
T Consensus 82 ~r~~~~~~~~~~i~~a~~lGa~~vv~h~g~~-----~~-------~~~~~~l~~l~~~a~~~~gv~l~lEn 140 (270)
T 3aam_A 82 LWEKSVASLADDLEKAALLGVEYVVVHPGSG-----RP-------ERVKEGALKALRLAGVRSRPVLLVEN 140 (270)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCEEEECCCBS-----CH-------HHHHHHHHHHHHHHTCCSSSEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHcCCCEEEECCCCC-----CH-------HHHHHHHHHHHHhhcccCCCEEEEec
Confidence 3467789999999999999999998765332 11 334444444445555 6789887743
No 105
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=32.60 E-value=1.7e+02 Score=27.14 Aligned_cols=85 Identities=16% Similarity=0.077 Sum_probs=54.3
Q ss_pred hhHHHHHHHHHHHHHcCCCeEEEEeeecCCCCCCHHHHHHHHHHHHHhHHHHHHHhhcCCcEEEEecCCCCCCHHHHHHH
Q 044091 122 AGVKSLKTLVELCCKWGIRVLTVFAFSSDNWFRPEVEVEFLMSLLESGVKEEKESFIRERIRISVIGDTSKLPKCLEELV 201 (275)
Q Consensus 122 ~G~~~l~eiv~wc~~~GI~~lTvYaFSteN~kRp~~EV~~Lm~l~~~~l~~~~~~~~~~~irvr~iGd~~~LP~~l~~~i 201 (275)
-|.+.+..+.++|.+.||..+|= .|+. +.|+.|.+ .++.+-=||-.+.---.+.+.+
T Consensus 88 l~~e~~~~L~~~~~~~Gi~~~st-~~d~-------~svd~l~~---------------~~v~~~KI~S~~~~n~~LL~~v 144 (349)
T 2wqp_A 88 LNEEDEIKLKEYVESKGMIFIST-LFSR-------AAALRLQR---------------MDIPAYKIGSGECNNYPLIKLV 144 (349)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEE-ECSH-------HHHHHHHH---------------HTCSCEEECGGGTTCHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCeEEEe-eCCH-------HHHHHHHh---------------cCCCEEEECcccccCHHHHHHH
Confidence 45788899999999999999875 4533 33444322 2333333565555554455443
Q ss_pred HHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHH
Q 044091 202 INVVETTKNNTRFQLIVAVSYSGQYDLVQACQRIAM 237 (275)
Q Consensus 202 ~~~e~~T~~~~~~~lniai~YgGR~EIv~A~r~l~~ 237 (275)
. .++.-|.+.-+-..-+||..|+.-+.+
T Consensus 145 a--------~~gkPviLstGmat~~Ei~~Ave~i~~ 172 (349)
T 2wqp_A 145 A--------SFGKPIILSTGMNSIESIKKSVEIIRE 172 (349)
T ss_dssp H--------TTCSCEEEECTTCCHHHHHHHHHHHHH
T ss_pred H--------hcCCeEEEECCCCCHHHHHHHHHHHHH
Confidence 3 134456666667789999999988764
No 106
>3tva_A Xylose isomerase domain protein TIM barrel; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.15A {Planctomyces limnophilus}
Probab=31.92 E-value=1.8e+02 Score=24.40 Aligned_cols=38 Identities=16% Similarity=0.127 Sum_probs=23.6
Q ss_pred hHHHHcCCCCCc-----chhhhHHHHHHHHHHHHHcCCCeEEE
Q 044091 107 RWAHLRGLPVGS-----GYEAGVKSLKTLVELCCKWGIRVLTV 144 (275)
Q Consensus 107 RwAk~~gl~~~~-----Gh~~G~~~l~eiv~wc~~~GI~~lTv 144 (275)
+.|++.|..-.+ .+......+.++.+++.+.|++..++
T Consensus 28 ~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~ 70 (290)
T 3tva_A 28 EVAQDLKVPTVQVHAPHPHTRTREHAQAFRAKCDAAGIQVTVI 70 (290)
T ss_dssp HHHHHTTCSEEEEECCCGGGCSHHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHcCCCEEEecCCCCCcCCHHHHHHHHHHHHHcCCEEEEE
Confidence 567777766433 12122456777777888888876655
No 107
>3g13_A Putative conjugative transposon recombinase; resolvase, PSI-II, target 11223F, structural genomics, prote structure initiative; 2.00A {Clostridium difficile}
Probab=31.78 E-value=68 Score=25.55 Aligned_cols=77 Identities=12% Similarity=0.138 Sum_probs=42.8
Q ss_pred hhHHH-HHHHHHHHHH-cCCCeEEEEe---eecCCC-CCCHHHHHHHHHHHHHhHHHHHHHhhcCCcEEEEecCCCCCCH
Q 044091 122 AGVKS-LKTLVELCCK-WGIRVLTVFA---FSSDNW-FRPEVEVEFLMSLLESGVKEEKESFIRERIRISVIGDTSKLPK 195 (275)
Q Consensus 122 ~G~~~-l~eiv~wc~~-~GI~~lTvYa---FSteN~-kRp~~EV~~Lm~l~~~~l~~~~~~~~~~~irvr~iGd~~~LP~ 195 (275)
.+++. ...+-+||.+ .|+..+.+|. .|..|+ +||. ...|++. +.+..+.+-++=++++|..
T Consensus 23 ~sl~~Q~~~~~~~a~~~~g~~~~~~~~D~g~Sg~~~~~Rp~--l~~ll~~-----------~~~g~id~vvv~~ldRl~R 89 (169)
T 3g13_A 23 NSYKSQVQYYTDMIKKNKEWVLADIYADEAITGTQVTKRED--FQRMIND-----------CMNGEIDMVFTKSISRFAR 89 (169)
T ss_dssp GSHHHHHHHHHHHHHTCTTEEEEEEEEEEC------CCSHH--HHHHHHH-----------HHTTCCSEEEESCHHHHCS
T ss_pred cCHHHHHHHHHHHHHHCCCCeEEEEEeeCCccCCCcCCCHH--HHHHHHH-----------HHcCCCcEEEEEecccccc
Confidence 34544 5556678887 4988888885 577775 6663 3344432 3344455666677777776
Q ss_pred HHHHHHHHHHHHhcCC
Q 044091 196 CLEELVINVVETTKNN 211 (275)
Q Consensus 196 ~l~~~i~~~e~~T~~~ 211 (275)
+..+.+.-++.....+
T Consensus 90 ~~~~~~~~~~~l~~~g 105 (169)
T 3g13_A 90 NTLDTLKYVRMLKERN 105 (169)
T ss_dssp SHHHHHHHHHHHHTTT
T ss_pred ChHHHHHHHHHHHHcC
Confidence 6666666666554443
No 108
>4b4k_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase; 2.50A {Bacillus anthracis}
Probab=31.62 E-value=2.3e+02 Score=24.02 Aligned_cols=67 Identities=16% Similarity=0.178 Sum_probs=42.0
Q ss_pred EEEEecCCchHHHHcCCCCCcchhhhHHHHHHHHHHHHHcCCCeEEEEeeecCCCCCCHHHHHHHHHHHHHhHHHHHHHh
Q 044091 98 VAVIMDGNRRWAHLRGLPVGSGYEAGVKSLKTLVELCCKWGIRVLTVFAFSSDNWFRPEVEVEFLMSLLESGVKEEKESF 177 (275)
Q Consensus 98 IAiImDGNRRwAk~~gl~~~~Gh~~G~~~l~eiv~wc~~~GI~~lTvYaFSteN~kRp~~EV~~Lm~l~~~~l~~~~~~~ 177 (275)
|||||-+. --+..+.+..+.+.++||++ -+..-| --|.++++..+.+ ..
T Consensus 25 V~IimGS~----------------SD~~v~~~a~~~L~~~gI~~-e~~V~S---AHRtp~~l~~~~~-----------~a 73 (181)
T 4b4k_A 25 VGVIMGST----------------SDWETMKYACDILDELNIPY-EKKVVS---AHRTPDYMFEYAE-----------TA 73 (181)
T ss_dssp EEEEESSG----------------GGHHHHHHHHHHHHHTTCCE-EEEECC---TTTSHHHHHHHHH-----------HT
T ss_pred EEEEECCH----------------hHHHHHHHHHHHHHHcCCCe-eEEEEc---cccChHHHHHHHH-----------HH
Confidence 99999863 23577888888899999994 233333 4677776443322 24
Q ss_pred hcCCcEEEEec--CCCCCCH
Q 044091 178 IRERIRISVIG--DTSKLPK 195 (275)
Q Consensus 178 ~~~~irvr~iG--d~~~LP~ 195 (275)
.++|++|-+.| --..||.
T Consensus 74 ~~~g~~ViIa~AG~aahLpG 93 (181)
T 4b4k_A 74 RERGLKVIIAGAGGAAHLPG 93 (181)
T ss_dssp TTTTCCEEEEEECSSCCHHH
T ss_pred HhcCceEEEEeccccccchh
Confidence 45666665554 4445554
No 109
>3fbu_A Acetyltransferase, GNAT family; structur genomics, PSI2, MCSG, protein structure initiative, midwest for structural genomics; HET: COA; 1.80A {Bacillus anthracis str}
Probab=31.35 E-value=79 Score=23.43 Aligned_cols=32 Identities=3% Similarity=-0.081 Sum_probs=26.0
Q ss_pred cchhhhHHHHHHHHHHHHHc-CCCeEEEEeeec
Q 044091 118 SGYEAGVKSLKTLVELCCKW-GIRVLTVFAFSS 149 (275)
Q Consensus 118 ~Gh~~G~~~l~eiv~wc~~~-GI~~lTvYaFSt 149 (275)
.|.--|-+.+..+++|+.+. |++.|.+...+.
T Consensus 95 rg~Gig~~ll~~~~~~a~~~~~~~~i~l~v~~~ 127 (168)
T 3fbu_A 95 FNKGYASEAAQATLKYGFKEMKLHRIIATCQPE 127 (168)
T ss_dssp TTSSHHHHHHHHHHHHHHHTSCCSEEEEEECTT
T ss_pred hcCCHHHHHHHHHHHHHHhhCCceEEEEEeccC
Confidence 45556778899999999876 999999988753
No 110
>1u11_A PURE (N5-carboxyaminoimidazole ribonucleotide MUT; acidophIle, protein stability, lyase; HET: CIT; 1.55A {Acetobacter aceti} SCOP: c.23.8.1 PDB: 2fwj_A* 2fw1_A* 2fwb_A 2fwa_A 2fw9_A 2fw7_A 2fw6_A 2fwp_A* 2fwi_A* 2fw8_A
Probab=30.44 E-value=2.5e+02 Score=23.80 Aligned_cols=68 Identities=13% Similarity=0.161 Sum_probs=44.2
Q ss_pred EEEEEecCCchHHHHcCCCCCcchhhhHHHHHHHHHHHHHcCCCeEEEEeeecCCCCCCHHHHHHHHHHHHHhHHHHHHH
Q 044091 97 HVAVIMDGNRRWAHLRGLPVGSGYEAGVKSLKTLVELCCKWGIRVLTVFAFSSDNWFRPEVEVEFLMSLLESGVKEEKES 176 (275)
Q Consensus 97 HIAiImDGNRRwAk~~gl~~~~Gh~~G~~~l~eiv~wc~~~GI~~lTvYaFSteN~kRp~~EV~~Lm~l~~~~l~~~~~~ 176 (275)
.|+|||-|. --+..+.+....+.++||+ |..-.----|.++++..+.+ .
T Consensus 23 ~V~IimGS~----------------SD~~v~~~a~~~L~~~Gi~----~dv~V~SaHR~p~~l~~~~~-----------~ 71 (182)
T 1u11_A 23 VVGIIMGSQ----------------SDWETMRHADALLTELEIP----HETLIVSAHRTPDRLADYAR-----------T 71 (182)
T ss_dssp SEEEEESSG----------------GGHHHHHHHHHHHHHTTCC----EEEEECCTTTCHHHHHHHHH-----------H
T ss_pred EEEEEECcH----------------HHHHHHHHHHHHHHHcCCC----eEEEEEcccCCHHHHHHHHH-----------H
Confidence 499999863 3357788888888999999 55544456788886644332 2
Q ss_pred hhcCCcEEEE--ecCCCCCCH
Q 044091 177 FIRERIRISV--IGDTSKLPK 195 (275)
Q Consensus 177 ~~~~~irvr~--iGd~~~LP~ 195 (275)
+.++|++|-+ -|--..||.
T Consensus 72 a~~~g~~ViIa~AG~aa~Lpg 92 (182)
T 1u11_A 72 AAERGLNVIIAGAGGAAHLPG 92 (182)
T ss_dssp TTTTTCCEEEEEEESSCCHHH
T ss_pred HHhCCCcEEEEecCchhhhHH
Confidence 3445555544 455556665
No 111
>3hst_B Protein RV2228C/MT2287; ribonuclease H1, RV2228C N-terminal domain, fusion protein, maltose binding protein, HYDR; HET: MLR TAR; 2.25A {Mycobacterium tuberculosis}
Probab=30.42 E-value=1.7e+02 Score=21.92 Aligned_cols=29 Identities=21% Similarity=0.087 Sum_probs=24.8
Q ss_pred hhhhHHHHHHHHHHHHHcCCCeEEEEeee
Q 044091 120 YEAGVKSLKTLVELCCKWGIRVLTVFAFS 148 (275)
Q Consensus 120 h~~G~~~l~eiv~wc~~~GI~~lTvYaFS 148 (275)
+.+-+..+..-++++.+.|++.|++|.-|
T Consensus 47 ~~aEl~A~~~aL~~a~~~~~~~v~i~tDS 75 (141)
T 3hst_B 47 NVAEYRGLIAGLDDAVKLGATEAAVLMDS 75 (141)
T ss_dssp HHHHHHHHHHHHHHHHHHTCSEEEEEESC
T ss_pred HHHHHHHHHHHHHHHHHCCCceEEEEeCh
Confidence 44567888889999999999999999877
No 112
>2j8m_A Acetyltransferase PA4866 from P. aeruginosa; GCN5 family, phosphinothricin, methionine sulfone, methionine sulfoximine; 1.44A {Pseudomonas aeruginosa} PDB: 2bl1_A 2j8n_A 2j8r_A* 1yvo_A
Probab=30.27 E-value=65 Score=24.51 Aligned_cols=33 Identities=27% Similarity=0.329 Sum_probs=27.4
Q ss_pred CcchhhhHHHHHHHHHHHHHcCCCeEEEEeeec
Q 044091 117 GSGYEAGVKSLKTLVELCCKWGIRVLTVFAFSS 149 (275)
Q Consensus 117 ~~Gh~~G~~~l~eiv~wc~~~GI~~lTvYaFSt 149 (275)
..|.--|-+-+..+++||.+.|+..|.++.++.
T Consensus 94 ~rg~Gig~~ll~~~~~~a~~~g~~~i~l~v~~~ 126 (172)
T 2j8m_A 94 QRGKGLGVQLLQALIERARAQGLHVMVAAIESG 126 (172)
T ss_dssp CTTSSHHHHHHHHHHHHHHHTTCCEEEEEEETT
T ss_pred hcCCCHHHHHHHHHHHHHHHCCccEEEEEEcCC
Confidence 345556788899999999999999999988753
No 113
>3bvp_A INT, TP901-1 integrase; DNA recombinase, recombination; 2.10A {Lactococcus phage tp901-1}
Probab=30.23 E-value=83 Score=24.26 Aligned_cols=67 Identities=15% Similarity=0.272 Sum_probs=43.8
Q ss_pred HHHHHHHHHHHHcCCCeEEEEe---eecCCCCCCHHHHHHHHHHHHHhHHHHHHHhhcCCcEEEEecCCCCCCHHHHHHH
Q 044091 125 KSLKTLVELCCKWGIRVLTVFA---FSSDNWFRPEVEVEFLMSLLESGVKEEKESFIRERIRISVIGDTSKLPKCLEELV 201 (275)
Q Consensus 125 ~~l~eiv~wc~~~GI~~lTvYa---FSteN~kRp~~EV~~Lm~l~~~~l~~~~~~~~~~~irvr~iGd~~~LP~~l~~~i 201 (275)
.....+-+||.+.|+..+-+|. .|..|++||. ...|++. +.+..+.+-++-++++|..+....+
T Consensus 25 ~Q~~~l~~~a~~~g~~~~~~~~D~g~Sg~~~~Rp~--l~~ll~~-----------~~~g~~d~lvv~~ldRl~R~~~~~~ 91 (138)
T 3bvp_A 25 EQIDRLTKYAEAMGWQVSDTYTDAGFSGAKLERPA--MQRLIND-----------IENKAFDTVLVYKLDRLSRSVRDTL 91 (138)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEEEETCCSSSSCCHH--HHHHHHG-----------GGGTSCSEEEESSHHHHCSCHHHHH
T ss_pred HHHHHHHHHHHHCCCEEEEEEEeCCCcCCCCCCHH--HHHHHHH-----------HHhCCCCEEEEEeCCcccccHHHHH
Confidence 4456677899999998888885 6888888763 3344332 3344566667777777776665533
Q ss_pred HHH
Q 044091 202 INV 204 (275)
Q Consensus 202 ~~~ 204 (275)
..+
T Consensus 92 ~~~ 94 (138)
T 3bvp_A 92 YLV 94 (138)
T ss_dssp HHH
T ss_pred HHH
Confidence 333
No 114
>1r4g_A RNA polymerase alpha subunit; three helix-bundle, viral protein, transferase; NMR {Sendai virus} SCOP: a.8.5.1
Probab=29.92 E-value=39 Score=22.97 Aligned_cols=18 Identities=28% Similarity=0.560 Sum_probs=14.8
Q ss_pred CCHHHHHHHHHHHHHhHH
Q 044091 154 RPEVEVEFLMSLLESGVK 171 (275)
Q Consensus 154 Rp~~EV~~Lm~l~~~~l~ 171 (275)
+..+||..+|+++.+-+.
T Consensus 32 ktdqEV~~~Memf~EDi~ 49 (53)
T 1r4g_A 32 KTDQEVKAVMELVEEDIE 49 (53)
T ss_dssp CSSHHHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHH
Confidence 456999999999987664
No 115
>2d73_A Alpha-glucosidase SUSB; glycoside hydrolase family 97, TIM barrel; 1.60A {Bacteroides thetaiotaomicron vpi-5482} PDB: 2zq0_A* 2jke_A* 2jka_A* 2jkp_A*
Probab=29.04 E-value=78 Score=32.49 Aligned_cols=99 Identities=12% Similarity=0.249 Sum_probs=0.0
Q ss_pred HHHHcCCCC--CcchhhhHHH--------------------HHHHHHHHHHcCCCeEEEEeeecCCCCCCHHHHHHHHHH
Q 044091 108 WAHLRGLPV--GSGYEAGVKS--------------------LKTLVELCCKWGIRVLTVFAFSSDNWFRPEVEVEFLMSL 165 (275)
Q Consensus 108 wAk~~gl~~--~~Gh~~G~~~--------------------l~eiv~wc~~~GI~~lTvYaFSteN~kRp~~EV~~Lm~l 165 (275)
||.++|++- .||.-+|.+. +.++++++.+-||+ |-+|.-+..|+.--..+.+..|++
T Consensus 379 FAA~~G~eyvLveGwD~GW~~~~~~~~~~~fd~~~p~pd~Dl~eL~~YA~sKGV~-iilw~~t~~~~~n~e~~~d~~f~~ 457 (738)
T 2d73_A 379 FAAAHGFDAVLVEGWNEGWEDWFGNSKDYVFDFVTPYPDFDVKEIHRYAARKGIK-MMMHHETSASVRNYERHMDKAYQF 457 (738)
T ss_dssp HHHHTTCSEEEECSCBTTGGGCSSSCCSSCCCSSCBCTTCCHHHHHHHHHHTTCE-EEEEEECTTBHHHHHHHHHHHHHH
T ss_pred HHHHcCCCEEEEEeccCCcccccCccccccccccccCCCCCHHHHHHHHHhCCCE-EEEEEcCCCchhhHHHHHHHHHHH
Q ss_pred HHHhHHHHHHHhhcCCcEEEEecCCCCCC-------HHHHHHHHHHHHHhcCCCceEEEE
Q 044091 166 LESGVKEEKESFIRERIRISVIGDTSKLP-------KCLEELVINVVETTKNNTRFQLIV 218 (275)
Q Consensus 166 ~~~~l~~~~~~~~~~~irvr~iGd~~~LP-------~~l~~~i~~~e~~T~~~~~~~lni 218 (275)
+.+ +-=.||++=++|| .+| ....+...++.+..+ .-++.||+
T Consensus 458 ~~~--------~Gv~GVKvdF~g~--~~~r~~~h~~Q~~v~~Y~~i~~~AA-~~~LmVnf 506 (738)
T 2d73_A 458 MAD--------NGYNSVKSGYVGN--IIPRGEHHYGQWMNNHYLYAVKKAA-DYKIMVNA 506 (738)
T ss_dssp HHH--------TTCCEEEEECCSS--CBSTTCCTTSHHHHHHHHHHHHHHH-HTTCEEEE
T ss_pred HHH--------cCCCEEEeCcccc--CcCCcccccchHHHHHHHHHHHHHH-HcCcEEEc
No 116
>1dbf_A Protein (chorismate mutase); shikimate pathway, isomerase; 1.30A {Bacillus subtilis} SCOP: d.79.1.2 PDB: 1com_A 2chs_A 2cht_A* 1fnj_A 1fnk_A
Probab=28.91 E-value=30 Score=27.94 Aligned_cols=32 Identities=19% Similarity=0.401 Sum_probs=25.3
Q ss_pred EEecCCCHHHHHHHHHHHHHHH-hcCCCCCCCC
Q 044091 218 VAVSYSGQYDLVQACQRIAMKV-KDGLIEPNDV 249 (275)
Q Consensus 218 iai~YgGR~EIv~A~r~l~~~v-~~g~l~~edI 249 (275)
+.+.-+.+++|.+|+++|.+++ +.+.++++||
T Consensus 10 ttv~~Nt~e~I~~at~eLl~~i~~~N~l~~~dI 42 (127)
T 1dbf_A 10 TTVERDTEEEILQKTKQLLEKIIEENHTKPEDV 42 (127)
T ss_dssp EECSSCCHHHHHHHHHHHHHHHHHHHCCCGGGE
T ss_pred eecCCCCHHHHHHHHHHHHHHHHHHcCCCHHHE
Confidence 3466789999999999997664 5677888765
No 117
>2vzy_A RV0802C; transferase, GCN5-related N-acetyltransferase, succinyltransferase; HET: FLC; 2.00A {Mycobacterium tuberculosis} PDB: 2vzz_A*
Probab=28.86 E-value=94 Score=24.59 Aligned_cols=33 Identities=18% Similarity=0.197 Sum_probs=26.9
Q ss_pred cchhhhHHHHHHHHHHHHH-cCCCeEEEEeeecCC
Q 044091 118 SGYEAGVKSLKTLVELCCK-WGIRVLTVFAFSSDN 151 (275)
Q Consensus 118 ~Gh~~G~~~l~eiv~wc~~-~GI~~lTvYaFSteN 151 (275)
.|.--|-+.+..+++|+.+ .|++.|.+++++. |
T Consensus 118 rgkGig~~ll~~l~~~a~~~~g~~~i~~~v~~~-N 151 (218)
T 2vzy_A 118 QGHGYGTEMRAAVLYFAFAELEAQVATSRSFVD-N 151 (218)
T ss_dssp TTSSHHHHHHHHHHHHHHHTSCCSEEEEEEETT-C
T ss_pred cCCCHHHHHHHHHHHHHHhhCCceEEEEEeccC-C
Confidence 3445677889999999998 8999999998753 5
No 118
>2ge3_A Probable acetyltransferase; structural GEN PSI, protein structure initiative, midwest center for struc genomics, MCSG; HET: ACO; 2.25A {Agrobacterium tumefaciens} SCOP: d.108.1.1
Probab=28.85 E-value=50 Score=24.98 Aligned_cols=33 Identities=12% Similarity=0.345 Sum_probs=27.5
Q ss_pred cchhhhHHHHHHHHHHHHHcCCCeEEEEeeecCC
Q 044091 118 SGYEAGVKSLKTLVELCCKWGIRVLTVFAFSSDN 151 (275)
Q Consensus 118 ~Gh~~G~~~l~eiv~wc~~~GI~~lTvYaFSteN 151 (275)
.|.--|-+-+..+++|+.+.|++.|.+++++ +|
T Consensus 98 rg~Gig~~ll~~~~~~a~~~g~~~i~l~v~~-~N 130 (170)
T 2ge3_A 98 RNKGLGARLMRRTLDAAHEFGLHRIELSVHA-DN 130 (170)
T ss_dssp TTSSHHHHHHHHHHHHHHHHTCCEEEEEEET-TC
T ss_pred hCCCHHHHHHHHHHHHHHHCCceEEEEEEEc-CC
Confidence 4555677889999999999999999999875 35
No 119
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=28.67 E-value=60 Score=27.23 Aligned_cols=24 Identities=4% Similarity=0.221 Sum_probs=20.8
Q ss_pred hhHHHHHHHHHHHHHcCCCeEEEE
Q 044091 122 AGVKSLKTLVELCCKWGIRVLTVF 145 (275)
Q Consensus 122 ~G~~~l~eiv~wc~~~GI~~lTvY 145 (275)
...+.+.+.++.|.++|++.|.+.
T Consensus 86 ~~~~~~~~~i~~A~~lGa~~v~~~ 109 (257)
T 3lmz_A 86 KSEEEIDRAFDYAKRVGVKLIVGV 109 (257)
T ss_dssp CSHHHHHHHHHHHHHHTCSEEEEE
T ss_pred CCHHHHHHHHHHHHHhCCCEEEec
Confidence 357889999999999999999974
No 120
>2r7h_A Putative D-alanine N-acetyltransferase of GNAT FA; putative acetyltransferase of the GNAT family; 1.85A {Desulfovibrio desulfuricans subsp}
Probab=28.43 E-value=1.3e+02 Score=22.29 Aligned_cols=33 Identities=18% Similarity=-0.037 Sum_probs=27.1
Q ss_pred CCcchhhhHHHHHHHHHHHHHcCCCeEEEEeee
Q 044091 116 VGSGYEAGVKSLKTLVELCCKWGIRVLTVFAFS 148 (275)
Q Consensus 116 ~~~Gh~~G~~~l~eiv~wc~~~GI~~lTvYaFS 148 (275)
...|.--|-.-+..+++|+.+.|++.+.+.+++
T Consensus 105 ~~rg~Gig~~ll~~~~~~~~~~g~~~i~l~~~~ 137 (177)
T 2r7h_A 105 HRQHSGLGRALLAEVVHDVRLTGGRLLFAETSG 137 (177)
T ss_dssp TTTTTTHHHHHHHHHHHHHHHTTCCEEEEEEEC
T ss_pred HHhCCCHHHHHHHHHHHHHHhcCCCEEEEEecc
Confidence 344555677889999999999999999998864
No 121
>1o4v_A Phosphoribosylaminoimidazole mutase PURE; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 1.77A {Thermotoga maritima} SCOP: c.23.8.1
Probab=28.36 E-value=2.7e+02 Score=23.64 Aligned_cols=68 Identities=18% Similarity=0.297 Sum_probs=44.6
Q ss_pred EEEEEecCCchHHHHcCCCCCcchhhhHHHHHHHHHHHHHcCCCeEEEEeeecCCCCCCHHHHHHHHHHHHHhHHHHHHH
Q 044091 97 HVAVIMDGNRRWAHLRGLPVGSGYEAGVKSLKTLVELCCKWGIRVLTVFAFSSDNWFRPEVEVEFLMSLLESGVKEEKES 176 (275)
Q Consensus 97 HIAiImDGNRRwAk~~gl~~~~Gh~~G~~~l~eiv~wc~~~GI~~lTvYaFSteN~kRp~~EV~~Lm~l~~~~l~~~~~~ 176 (275)
.|+|||-|. --+..+.+....+.++||+ |..-.----|.++++..+.+ .
T Consensus 15 ~V~IimGS~----------------SD~~v~~~a~~~L~~~Gi~----~dv~V~SaHR~p~~l~~~~~-----------~ 63 (183)
T 1o4v_A 15 RVGIIMGSD----------------SDLPVMKQAAEILEEFGID----YEITIVSAHRTPDRMFEYAK-----------N 63 (183)
T ss_dssp EEEEEESCG----------------GGHHHHHHHHHHHHHTTCE----EEEEECCTTTCHHHHHHHHH-----------H
T ss_pred eEEEEeccH----------------HHHHHHHHHHHHHHHcCCC----eEEEEEcccCCHHHHHHHHH-----------H
Confidence 699999863 3357788888888899999 56555556788887654433 2
Q ss_pred hhcCCcEEEE--ecCCCCCCH
Q 044091 177 FIRERIRISV--IGDTSKLPK 195 (275)
Q Consensus 177 ~~~~~irvr~--iGd~~~LP~ 195 (275)
+.+++++|-+ -|--..||.
T Consensus 64 a~~~g~~ViIa~AG~aa~Lpg 84 (183)
T 1o4v_A 64 AEERGIEVIIAGAGGAAHLPG 84 (183)
T ss_dssp TTTTTCCEEEEEEESSCCHHH
T ss_pred HHhCCCcEEEEecCcccccHH
Confidence 3344444444 455555665
No 122
>3trh_A Phosphoribosylaminoimidazole carboxylase carboxyltransferase subunit; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.20A {Coxiella burnetii}
Probab=28.16 E-value=2.6e+02 Score=23.35 Aligned_cols=68 Identities=15% Similarity=0.135 Sum_probs=43.8
Q ss_pred EEEEEecCCchHHHHcCCCCCcchhhhHHHHHHHHHHHHHcCCCeEEEEeeecCCCCCCHHHHHHHHHHHHHhHHHHHHH
Q 044091 97 HVAVIMDGNRRWAHLRGLPVGSGYEAGVKSLKTLVELCCKWGIRVLTVFAFSSDNWFRPEVEVEFLMSLLESGVKEEKES 176 (275)
Q Consensus 97 HIAiImDGNRRwAk~~gl~~~~Gh~~G~~~l~eiv~wc~~~GI~~lTvYaFSteN~kRp~~EV~~Lm~l~~~~l~~~~~~ 176 (275)
.|+|||-+- --+....+....+.++||++ ..-.----|.++++..+.+ .
T Consensus 8 ~V~IimgS~----------------SD~~v~~~a~~~l~~~gi~~----ev~V~SaHR~p~~~~~~~~-----------~ 56 (169)
T 3trh_A 8 FVAILMGSD----------------SDLSTMETAFTELKSLGIPF----EAHILSAHRTPKETVEFVE-----------N 56 (169)
T ss_dssp EEEEEESCG----------------GGHHHHHHHHHHHHHTTCCE----EEEECCTTTSHHHHHHHHH-----------H
T ss_pred cEEEEECcH----------------HhHHHHHHHHHHHHHcCCCE----EEEEEcccCCHHHHHHHHH-----------H
Confidence 699999863 33577888888889999994 4433345788886655433 2
Q ss_pred hhcCCcEEEEe--cCCCCCCH
Q 044091 177 FIRERIRISVI--GDTSKLPK 195 (275)
Q Consensus 177 ~~~~~irvr~i--Gd~~~LP~ 195 (275)
+.+++++|-+. |--..||.
T Consensus 57 a~~~g~~ViIa~AG~aa~Lpg 77 (169)
T 3trh_A 57 ADNRGCAVFIAAAGLAAHLAG 77 (169)
T ss_dssp HHHTTEEEEEEEECSSCCHHH
T ss_pred HHhCCCcEEEEECChhhhhHH
Confidence 34456665554 44455664
No 123
>1muw_A Xylose isomerase; atomic resolution, disorder; 0.86A {Streptomyces olivochromogenes} SCOP: c.1.15.3 PDB: 1s5m_A* 1s5n_A* 2gyi_A* 1xyb_A* 1xyc_A* 1xya_A* 1xyl_A 1xym_A* 1dxi_A 3gnx_A* 1gw9_A* 1xib_A 1xic_A* 1xid_A* 1xie_A* 1xif_A* 1xig_A* 1xih_A* 1xii_A* 1xij_A ...
Probab=27.99 E-value=74 Score=28.94 Aligned_cols=64 Identities=8% Similarity=0.107 Sum_probs=41.2
Q ss_pred hhhhHHHHHHHHHHHHHcCCCeEEEEeeec-CC--CCCCHHHHHHHHHHHHHhHHHHHHHhhcCC--cEEEE
Q 044091 120 YEAGVKSLKTLVELCCKWGIRVLTVFAFSS-DN--WFRPEVEVEFLMSLLESGVKEEKESFIRER--IRISV 186 (275)
Q Consensus 120 h~~G~~~l~eiv~wc~~~GI~~lTvYaFSt-eN--~kRp~~EV~~Lm~l~~~~l~~~~~~~~~~~--irvr~ 186 (275)
..+.++.+.+.++.|.++|++.+.++.-.. .+ +..+.+ .-++.+.+.|++..+...+.| |++-+
T Consensus 111 r~~~i~~~~~~i~~A~~LGa~~vvv~~g~~~~~~~~~~~~~---~~~~~~~e~L~~l~~~A~~~G~~v~l~l 179 (386)
T 1muw_A 111 RRYALRKTIRNIDLAVELGAKTYVAWGGREGAESGAAKDVR---VALDRMKEAFDLLGEYVTSQGYDIRFAI 179 (386)
T ss_dssp HHHHHHHHHHHHHHHHHHTCSEEEECCTTCEESSTTSCCHH---HHHHHHHHHHHHHHHHHHHHTCCCEEEE
T ss_pred HHHHHHHHHHHHHHHHHhCCCEEEECCCCCcccccccCCHH---HHHHHHHHHHHHHHHHHHhcCCCeEEEE
Confidence 566789999999999999999999864211 00 112222 233445555555556666777 77766
No 124
>3eo4_A Uncharacterized protein MJ1062; APC60792.2,MJ_1062,methanocaldococcus jannaschii DSM 2661, S genomics, PSI-2; HET: MES PG6; 2.19A {Methanocaldococcus jannaschii}
Probab=27.91 E-value=78 Score=23.60 Aligned_cols=33 Identities=12% Similarity=0.081 Sum_probs=27.2
Q ss_pred CcchhhhHHHHHHHHHHHHHcCCCeEEEEeeec
Q 044091 117 GSGYEAGVKSLKTLVELCCKWGIRVLTVFAFSS 149 (275)
Q Consensus 117 ~~Gh~~G~~~l~eiv~wc~~~GI~~lTvYaFSt 149 (275)
..|.--|-+.+..+++|+.+.|++.|.+..++.
T Consensus 102 ~rg~Gig~~ll~~~~~~a~~~g~~~i~l~v~~~ 134 (164)
T 3eo4_A 102 LWGKHIGRHSVSLVLKWLKNIGYKKAHARILEN 134 (164)
T ss_dssp STTSSHHHHHHHHHHHHHHHTTCCEEEEEEETT
T ss_pred HcCccHHHHHHHHHHHHHHhCCCcEEEEEeCCC
Confidence 345556778899999999999999999998753
No 125
>3f8k_A Protein acetyltransferase; GCN5-related N-acetyltransferase; HET: COA; 1.84A {Sulfolobus solfataricus P2}
Probab=27.77 E-value=91 Score=22.85 Aligned_cols=30 Identities=23% Similarity=0.357 Sum_probs=25.1
Q ss_pred chhhhHHHHHHHHHHHHHcCCCeEEEEeee
Q 044091 119 GYEAGVKSLKTLVELCCKWGIRVLTVFAFS 148 (275)
Q Consensus 119 Gh~~G~~~l~eiv~wc~~~GI~~lTvYaFS 148 (275)
|.--|-.-+..+++|+.+.|++.+.++...
T Consensus 87 g~Gig~~ll~~~~~~~~~~g~~~i~l~~~~ 116 (160)
T 3f8k_A 87 TLGIGTLLVKTLIEEAKKSGLSTVKFYTLP 116 (160)
T ss_dssp TSSHHHHHHHHHHHHHHHTTCSEEEEEECT
T ss_pred CCCHHHHHHHHHHHHHHHcCceEEEEEEcc
Confidence 444677889999999999999999998764
No 126
>1qtw_A Endonuclease IV; DNA repair enzyme, TIM barrel, trinuclear Zn cluster, hydrolase; 1.02A {Escherichia coli} SCOP: c.1.15.1 PDB: 1qum_A* 2nqh_A 2nqj_A* 2nq9_A*
Probab=27.32 E-value=2.1e+02 Score=23.76 Aligned_cols=63 Identities=10% Similarity=0.122 Sum_probs=38.1
Q ss_pred chhhhHHHHHHHHHHHHHcCCCeEEEEeeecCCCCCCHHH-HHHHHHHHHHhHHHHHHHhhcCCcEEEEec
Q 044091 119 GYEAGVKSLKTLVELCCKWGIRVLTVFAFSSDNWFRPEVE-VEFLMSLLESGVKEEKESFIRERIRISVIG 188 (275)
Q Consensus 119 Gh~~G~~~l~eiv~wc~~~GI~~lTvYaFSteN~kRp~~E-V~~Lm~l~~~~l~~~~~~~~~~~irvr~iG 188 (275)
-..+.++.+.+.++.|.++|++.+.+..-+.. ...+.++ .+.+ .+.+++... .+.|+++-+--
T Consensus 83 ~r~~~~~~~~~~i~~A~~lGa~~v~~~~g~~~-~~~~~~~~~~~~----~~~l~~l~a--~~~gv~l~lEn 146 (285)
T 1qtw_A 83 ALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHL-MQISEEDCLARI----AESINIALD--KTQGVTAVIEN 146 (285)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCEEEECCCBCT-TTSCHHHHHHHH----HHHHHHHHH--HCSSCEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHcCCCEEEECcCCCC-CCCCHHHHHHHH----HHHHHHHHh--ccCCCEEEEec
Confidence 34567889999999999999999988653321 1213332 3333 333333222 34688887743
No 127
>2bei_A Diamine acetyltransferase 2; SSAT2, BC011751, AAH11751, thialysine N-acetyltransferase, structural genomics, protein structure initiative, PSI; HET: ACO; 1.84A {Homo sapiens} SCOP: d.108.1.1 PDB: 2q4v_A*
Probab=27.22 E-value=62 Score=24.93 Aligned_cols=32 Identities=19% Similarity=0.251 Sum_probs=26.7
Q ss_pred cchhhhHHHHHHHHHHHHHcCCCeEEEEeeec
Q 044091 118 SGYEAGVKSLKTLVELCCKWGIRVLTVFAFSS 149 (275)
Q Consensus 118 ~Gh~~G~~~l~eiv~wc~~~GI~~lTvYaFSt 149 (275)
.|.-.|-.-+..+++||.+.|++.|.+..++.
T Consensus 101 rg~GiG~~Ll~~~~~~a~~~g~~~i~L~v~~~ 132 (170)
T 2bei_A 101 RGQGIGSKIIKKVAEVALDKGCSQFRLAVLDW 132 (170)
T ss_dssp CSSSHHHHHHHHHHHHHHHTTCCEEEEEEETT
T ss_pred cCCCHHHHHHHHHHHHHHHCCCCEEEEEEecc
Confidence 45557778899999999999999999988753
No 128
>3igr_A Ribosomal-protein-S5-alanine N-acetyltransferase; fisch MCSG, structural genomics, midwest center for structural GE protein structure initiative; HET: MSE; 2.00A {Vibrio fischeri} SCOP: d.108.1.0
Probab=26.93 E-value=95 Score=23.30 Aligned_cols=32 Identities=3% Similarity=0.021 Sum_probs=26.1
Q ss_pred cchhhhHHHHHHHHHHH-HHcCCCeEEEEeeec
Q 044091 118 SGYEAGVKSLKTLVELC-CKWGIRVLTVFAFSS 149 (275)
Q Consensus 118 ~Gh~~G~~~l~eiv~wc-~~~GI~~lTvYaFSt 149 (275)
.|.--|-+-+..+++|+ .+.|++.|.+...+.
T Consensus 108 rg~Gig~~ll~~~~~~a~~~~g~~~i~~~v~~~ 140 (184)
T 3igr_A 108 QGKGIMRRAVNVTIDWMFKAQNLHRIMAAYIPR 140 (184)
T ss_dssp TTSSHHHHHHHHHHHHHHHTSCCSEEEEEECTT
T ss_pred ccCcHHHHHHHHHHHHHHhhCCceEEEEEecCC
Confidence 45556788899999999 678999999988753
No 129
>2ae6_A Acetyltransferase, GNAT family; GCN5-related N-acetyltransferase (GNAT), alpha-beta, structu genomics, PSI, protein structure initiative; HET: GOL; 2.19A {Enterococcus faecalis} SCOP: d.108.1.1
Probab=25.98 E-value=62 Score=24.61 Aligned_cols=32 Identities=16% Similarity=0.180 Sum_probs=26.7
Q ss_pred cchhhhHHHHHHHHHHHHHcCCCeEEEEeeec
Q 044091 118 SGYEAGVKSLKTLVELCCKWGIRVLTVFAFSS 149 (275)
Q Consensus 118 ~Gh~~G~~~l~eiv~wc~~~GI~~lTvYaFSt 149 (275)
.|.--|-.-+..+++|+.+.|++.|.+.+++.
T Consensus 94 rg~GiG~~ll~~~~~~a~~~g~~~i~l~v~~~ 125 (166)
T 2ae6_A 94 QDQGIGGSLLSYIKDMAEISGIHKLSLRVMAT 125 (166)
T ss_dssp TTSSHHHHHHHHHHHHHHHHTCCEEEEEEETT
T ss_pred hCCCHHHHHHHHHHHHHHHCCCCEEEEEeecC
Confidence 35456778899999999999999999998753
No 130
>1vhs_A Similar to phosphinothricin acetyltransferase; structural genomics, unknown function; 1.80A {Bacillus subtilis} SCOP: d.108.1.1
Probab=25.94 E-value=74 Score=24.50 Aligned_cols=33 Identities=30% Similarity=0.479 Sum_probs=27.1
Q ss_pred cchhhhHHHHHHHHHHHHHcCCCeEEEEeeecCC
Q 044091 118 SGYEAGVKSLKTLVELCCKWGIRVLTVFAFSSDN 151 (275)
Q Consensus 118 ~Gh~~G~~~l~eiv~wc~~~GI~~lTvYaFSteN 151 (275)
.|.--|-+-+..+++||.+.|++.|.+..+. +|
T Consensus 94 rg~GiG~~ll~~~~~~a~~~g~~~i~l~v~~-~N 126 (175)
T 1vhs_A 94 RGKGVGSYLLQEALRIAPNLGIRSLMAFIFG-HN 126 (175)
T ss_dssp CSSSHHHHHHHHHHHHGGGGTCSEEEEEEET-TC
T ss_pred cCCCHHHHHHHHHHHHHHhCCceEEEEEEec-CC
Confidence 3445677889999999999999999998875 35
No 131
>2i79_A Acetyltransferase, GNAT family; acetyl coenzyme *A, structur genomics, PSI-2, protein structure initiative; HET: ACO; 2.10A {Streptococcus pneumoniae}
Probab=25.94 E-value=1.1e+02 Score=23.24 Aligned_cols=33 Identities=21% Similarity=0.180 Sum_probs=27.4
Q ss_pred cchhhhHHHHHHHHHHHHHcC-CCeEEEEeeecCC
Q 044091 118 SGYEAGVKSLKTLVELCCKWG-IRVLTVFAFSSDN 151 (275)
Q Consensus 118 ~Gh~~G~~~l~eiv~wc~~~G-I~~lTvYaFSteN 151 (275)
.|.--|-+-+..+++||.+.| ++.|.+.+++ +|
T Consensus 99 ~g~Gig~~ll~~~~~~a~~~~~~~~i~l~v~~-~N 132 (172)
T 2i79_A 99 WNNGLGSLLLEEAIEWAQASGILRRLQLTVQT-RN 132 (172)
T ss_dssp TTSSHHHHHHHHHHHHHHHTSSCCEEEEEEET-TC
T ss_pred cCCCHHHHHHHHHHHHHHhcCCeEEEEEEEEC-CC
Confidence 455567788999999999998 9999999886 45
No 132
>3h7i_A Ribonuclease H, RNAse H; BPT4 RNAse H, 5'-3' exonuclease, hydrolase, endonuclease; 1.50A {Enterobacteria phage T4} PDB: 2ihn_A 3h8w_A 3h8j_A 1tfr_A 3h8s_A
Probab=25.82 E-value=1.3e+02 Score=27.52 Aligned_cols=82 Identities=13% Similarity=0.036 Sum_probs=49.3
Q ss_pred CCCCEEEEEecCC--chHHHHcCCCCCcchhhhHHH-H------------HHHHHHHHHcCCCeEEEEeeecCCCCCCHH
Q 044091 93 SMPRHVAVIMDGN--RRWAHLRGLPVGSGYEAGVKS-L------------KTLVELCCKWGIRVLTVFAFSSDNWFRPEV 157 (275)
Q Consensus 93 ~iPrHIAiImDGN--RRwAk~~gl~~~~Gh~~G~~~-l------------~eiv~wc~~~GI~~lTvYaFSteN~kRp~~ 157 (275)
.-|.||||+.|+. .-|=++. .+...+++..... + .-+-+++..+||+.+.+=. -
T Consensus 61 ~~P~~iavaFD~~~~~tfR~el-yp~YKanR~~~PeeL~~Q~~~l~~Qi~p~ike~l~a~gi~~l~~~G----------~ 129 (305)
T 3h7i_A 61 LGYTKIVLCIDNAKSGYWRRDF-AYYYKKNRGKAREESTWDWEGYFESSHKVIDELKAYMPYIVMDIDK----------Y 129 (305)
T ss_dssp TTCCEEEEECCCCTTCCHHHHH-STTTTHHHHHHHHHCSSCHHHHHHHHHHHHHHHHHHSSSEEECCTT----------C
T ss_pred cCCCEEEEEecCCCCcchHhhh-CHHhccCCCCCCHHHHHHHHHhhhhhHHHHHHHHHHCCCCEEccCC----------c
Confidence 3589999999965 2454444 4556666666432 1 2244556668998776522 3
Q ss_pred HHHHHHHHHHHhHHHHHHHhhcCCcEEE-EecCCCC
Q 044091 158 EVEFLMSLLESGVKEEKESFIRERIRIS-VIGDTSK 192 (275)
Q Consensus 158 EV~~Lm~l~~~~l~~~~~~~~~~~irvr-~iGd~~~ 192 (275)
|-++++.-+.... .+.|.+|. +.||.+.
T Consensus 130 EADDiIgTLA~~a-------~~~g~~V~IvSgDKDl 158 (305)
T 3h7i_A 130 EANDHIAVLVKKF-------SLEGHKILIISSDGDF 158 (305)
T ss_dssp CHHHHHHHHHHHH-------HHTTCCEEEECSSCCC
T ss_pred cHHHHHHHHHHHH-------HHCCCcEEEEeCCCCc
Confidence 6677776555433 23455554 4678876
No 133
>4e0a_A BH1408 protein; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG, transferase; 1.80A {Bacillus halodurans} PDB: 4f6a_A*
Probab=25.73 E-value=75 Score=23.15 Aligned_cols=31 Identities=6% Similarity=0.142 Sum_probs=26.0
Q ss_pred cchhhhHHHHHHHHHHHHHcCCCeEEEEeee
Q 044091 118 SGYEAGVKSLKTLVELCCKWGIRVLTVFAFS 148 (275)
Q Consensus 118 ~Gh~~G~~~l~eiv~wc~~~GI~~lTvYaFS 148 (275)
.|.--|-.-+..+++|+.+.|++.+.+...+
T Consensus 101 rg~Gig~~ll~~~~~~~~~~g~~~i~l~~~~ 131 (164)
T 4e0a_A 101 RGGGIGRLIFEAIISYGKAHQVDAIELDVYD 131 (164)
T ss_dssp CSSSHHHHHHHHHHHHHHHTTCSEEEEEEET
T ss_pred hcCChHHHHHHHHHHHHHHcCCCEEEEEEEc
Confidence 3545677889999999999999999998764
No 134
>3oqi_A YVMC, putative uncharacterized protein YVMC; tRNA, rossmann fold, ligase; HET: NHE; 1.70A {Bacillus licheniformis} PDB: 3oqh_A* 3oqj_A* 3s7t_A* 3oqi_B*
Probab=25.69 E-value=1.2e+02 Score=27.10 Aligned_cols=115 Identities=13% Similarity=0.145 Sum_probs=69.3
Q ss_pred hHHHHHHHHHHHHHcCCCeEEEEeeec---CC-----------CCCCHHHHHHHHHHHHHhHHHHHHHhhcCCcEEEEec
Q 044091 123 GVKSLKTLVELCCKWGIRVLTVFAFSS---DN-----------WFRPEVEVEFLMSLLESGVKEEKESFIRERIRISVIG 188 (275)
Q Consensus 123 G~~~l~eiv~wc~~~GI~~lTvYaFSt---eN-----------~kRp~~EV~~Lm~l~~~~l~~~~~~~~~~~irvr~iG 188 (275)
.-+.+.++++|+ ..+.+.++|..-.+ .| -++-..|++.+++-++..+++... ..+ +|+-.-
T Consensus 44 s~d~L~~Li~Wa-~~~F~~vdVli~D~~~~~~l~A~G~~~~~A~rKArre~~~~r~~i~ral~~~g~---~~~-~v~~~S 118 (257)
T 3oqi_A 44 SEDYIHRLIAWA-VREFQSVSVLLAGKEAANLLEALGTPHGKAERKVRKEVSRNRRFAEKALEAHGG---NPE-DIHTFS 118 (257)
T ss_dssp CHHHHHHHHHHH-HHHCSEEEEEECCTTHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTC---CTT-CEEETT
T ss_pred CHHHHHHHHHHH-HccCCceEEEeCCHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHHHHcCC---Ccc-cceeHH
Confidence 347799999999 77899999877543 11 123335666666666666553211 122 677777
Q ss_pred CCCCCCHHHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHHHhcCC-----CCCCCCCHHHHHhh
Q 044091 189 DTSKLPKCLEELVINVVETTKNNTRFQLIVAVSYSGQYDLVQACQRIAMKVKDGL-----IEPNDVSESLIEQE 257 (275)
Q Consensus 189 d~~~LP~~l~~~i~~~e~~T~~~~~~~lniai~YgGR~EIv~A~r~l~~~v~~g~-----l~~edI~e~~i~~~ 257 (275)
|.. .-+..++....++..-..+ ++.-+||.++...+..+. ...+.++++.++..
T Consensus 119 d~~-~~~~Y~~l~~~ve~af~~d--------------~~fR~ac~~ms~~~L~~r~~g~~~~~~~~se~~l~~a 177 (257)
T 3oqi_A 119 DFA-NQTAYRNLRMEVEAAFFDQ--------------THFRNACLEMSHAAILGRARGTRMDVVEVSADMLELA 177 (257)
T ss_dssp TTT-TCHHHHHHHHHHHHHHHHC--------------HHHHHHHHHHHHHHHHHHHHHSCSSCCCCCHHHHHHH
T ss_pred Hhh-cCHHHHHHHHHHHHHHhcC--------------HHHHHHHHHHHHHHHHcccCCCCCCcCCCCHHHHHHH
Confidence 774 4667888888888764444 444455544444333322 23356888888743
No 135
>1ufy_A Chorismate mutase; shikimate pathway, mutant, riken structur genomics/proteomics initiative, RSGI, structural genomics,; HET: MES; 0.96A {Thermus thermophilus} SCOP: d.79.1.2 PDB: 1ode_A* 1ui9_A*
Probab=25.51 E-value=40 Score=27.04 Aligned_cols=32 Identities=16% Similarity=0.269 Sum_probs=25.2
Q ss_pred EEecCCCHHHHHHHHHHHHHHH-hcCCCCC-CCC
Q 044091 218 VAVSYSGQYDLVQACQRIAMKV-KDGLIEP-NDV 249 (275)
Q Consensus 218 iai~YgGR~EIv~A~r~l~~~v-~~g~l~~-edI 249 (275)
+.+.-+.+++|.+|+++|.+++ +.+.+++ +||
T Consensus 9 ttv~~n~~e~I~~at~eLl~~i~~~N~l~~~~di 42 (122)
T 1ufy_A 9 ITVEEDTPEAIHQATRELLLKMLEANGIQSYEEL 42 (122)
T ss_dssp EECSSSSHHHHHHHHHHHHHHHHHHHTCCCGGGE
T ss_pred eecCCCCHHHHHHHHHHHHHHHHHhcCCCChHhE
Confidence 3466789999999999997664 5677888 765
No 136
>2x47_A Macro domain-containing protein 1; signaling protein, signal transduction, estrogen signaling; 1.70A {Homo sapiens}
Probab=25.30 E-value=1.7e+02 Score=25.38 Aligned_cols=47 Identities=11% Similarity=0.101 Sum_probs=36.1
Q ss_pred HHHHHHHHHHHHcCCCeEEEEeeecCCCCCCHHHHHHHH-HHHHHhHH
Q 044091 125 KSLKTLVELCCKWGIRVLTVFAFSSDNWFRPEVEVEFLM-SLLESGVK 171 (275)
Q Consensus 125 ~~l~eiv~wc~~~GI~~lTvYaFSteN~kRp~~EV~~Lm-~l~~~~l~ 171 (275)
+...+.++.+.+.|++.|.+=++|+.++.=|.+++..+| +.+.+++.
T Consensus 155 ~~y~~~L~~A~e~~i~SIAfP~IstG~~g~p~~~aa~i~~~~v~~fl~ 202 (235)
T 2x47_A 155 SCYLSSLDLLLEHRLRSVAFPCISTGVFGYPCEAAAEIVLATLREWLE 202 (235)
T ss_dssp HHHHHHHHHHHHTTCCEEEECCTTCSTTSCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCceEEeccccCCCCCCCHHHHHHHHHHHHHHHHH
Confidence 445566666778899999999999999999999988765 33444443
No 137
>2g0w_A LMO2234 protein; putative sugar isomerase, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE PG4; 1.70A {Listeria monocytogenes} SCOP: c.1.15.4
Probab=25.12 E-value=3.2e+02 Score=23.23 Aligned_cols=76 Identities=9% Similarity=0.028 Sum_probs=36.0
Q ss_pred HHHHHHHHHHcCCCeEEEEeeecCCCCCCHHHHHHHHHHHHHhHHHHHHHhhcCCcEEEEecCCCCCC-HHHHHHHHHHH
Q 044091 127 LKTLVELCCKWGIRVLTVFAFSSDNWFRPEVEVEFLMSLLESGVKEEKESFIRERIRISVIGDTSKLP-KCLEELVINVV 205 (275)
Q Consensus 127 l~eiv~wc~~~GI~~lTvYaFSteN~kRp~~EV~~Lm~l~~~~l~~~~~~~~~~~irvr~iGd~~~LP-~~l~~~i~~~e 205 (275)
+.++.+++.+.|++..++..+ .||.-+.++...-.+ .+.+.++.....|++.-++|-....+ +.+.+.++++.
T Consensus 70 ~~~~~~~l~~~gl~i~~~~~~--~~~~~~~~~~~~~~~----~~~~~i~~A~~lGa~~v~~g~~~~~~~~~~~~~l~~l~ 143 (296)
T 2g0w_A 70 DEDMLRILDEHNMKVTEVEYI--TQWGTAEDRTAEQQK----KEQTTFHMARLFGVKHINCGLLEKIPEEQIIVALGELC 143 (296)
T ss_dssp HHHHHHHHHHTTCEEEEEECB--CCCSSTTTCCHHHHH----HHHHHHHHHHHHTCCEEEECCCSCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCceEeehhh--hccccCChHHHHHHH----HHHHHHHHHHHcCCCEEEEcCCCCCCHHHHHHHHHHHH
Confidence 556777778888887776553 455222111111112 22233333444555544455332222 33445555555
Q ss_pred HHh
Q 044091 206 ETT 208 (275)
Q Consensus 206 ~~T 208 (275)
+..
T Consensus 144 ~~a 146 (296)
T 2g0w_A 144 DRA 146 (296)
T ss_dssp HHH
T ss_pred HHh
Confidence 544
No 138
>3owc_A Probable acetyltransferase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; HET: COA; 1.90A {Pseudomonas aeruginosa}
Probab=25.03 E-value=1.2e+02 Score=22.76 Aligned_cols=32 Identities=16% Similarity=0.199 Sum_probs=26.2
Q ss_pred cchhhhHHHHHHHHHHHHH-cCCCeEEEEeeec
Q 044091 118 SGYEAGVKSLKTLVELCCK-WGIRVLTVFAFSS 149 (275)
Q Consensus 118 ~Gh~~G~~~l~eiv~wc~~-~GI~~lTvYaFSt 149 (275)
.|.--|-.-+..+++|+.+ .|++.+.++....
T Consensus 106 rg~Gig~~ll~~~~~~a~~~~g~~~i~~~~~~~ 138 (188)
T 3owc_A 106 RGQGLGLPMLEALLAEAFADADIERVELNVYDW 138 (188)
T ss_dssp TTSSCHHHHHHHHHHHHHHSTTCCEEEEEEETT
T ss_pred hCCChhHHHHHHHHHHHHHhhCceEEEEEEecC
Confidence 3445677889999999999 6999999988753
No 139
>1is8_A GTP cyclohydrolase I; enzyme-regulatory protein complex, hydrolase/protein binding complex; HET: PHE; 2.70A {Rattus norvegicus} SCOP: d.96.1.1 PDB: 1is7_A* 1wpl_A* 1fb1_A
Probab=24.78 E-value=42 Score=29.69 Aligned_cols=26 Identities=19% Similarity=0.387 Sum_probs=21.5
Q ss_pred CEEEEEecCCchHHHHcCCCCCcchhhhHHHHHHHHHHHHH
Q 044091 96 RHVAVIMDGNRRWAHLRGLPVGSGYEAGVKSLKTLVELCCK 136 (275)
Q Consensus 96 rHIAiImDGNRRwAk~~gl~~~~Gh~~G~~~l~eiv~wc~~ 136 (275)
-|||.|+|| .-.|+.++..+++|...
T Consensus 132 ahVaYiP~g---------------kViGLSKlaRiVd~far 157 (230)
T 1is8_A 132 VHIGYLPNK---------------QVLGLSKLARIVEIYSR 157 (230)
T ss_dssp EEEEEECSE---------------ECCCHHHHHHHHHHHHS
T ss_pred EEEEEcCCC---------------eeccHHHHHHHHHHHhc
Confidence 399999974 46889999999998654
No 140
>1wur_A GTP cyclohydrolase I; beta barrel, protein-inhibitor complex, pteridine tetrahydrobiopterin, structural genomics, NPPSFA; HET: 8DG; 1.82A {Thermus thermophilus} SCOP: d.96.1.1 PDB: 1wm9_A* 1wuq_A*
Probab=24.70 E-value=41 Score=29.53 Aligned_cols=26 Identities=23% Similarity=0.482 Sum_probs=21.7
Q ss_pred CEEEEEecCCchHHHHcCCCCCcchhhhHHHHHHHHHHHHH
Q 044091 96 RHVAVIMDGNRRWAHLRGLPVGSGYEAGVKSLKTLVELCCK 136 (275)
Q Consensus 96 rHIAiImDGNRRwAk~~gl~~~~Gh~~G~~~l~eiv~wc~~ 136 (275)
-|||.|+|| .-.|+.++..+++|...
T Consensus 119 ahVaYiP~~---------------kVvGLSKlaRiV~~far 144 (220)
T 1wur_A 119 VHIGYIPDG---------------KILGLSKFARIVDMFAR 144 (220)
T ss_dssp EEEEEECSS---------------EEECHHHHHHHHHHHHS
T ss_pred EEEEEeCCC---------------eeecHHHHHHHHHHHHc
Confidence 499999974 46899999999998654
No 141
>1s7k_A Acetyl transferase; GNAT; 1.80A {Salmonella typhimurium} SCOP: d.108.1.1 PDB: 1s7l_A* 1s7n_A* 1s7f_A 1z9u_A
Probab=24.61 E-value=1.3e+02 Score=22.22 Aligned_cols=31 Identities=19% Similarity=0.174 Sum_probs=25.7
Q ss_pred cchhhhHHHHHHHHHHHHH-cCCCeEEEEeee
Q 044091 118 SGYEAGVKSLKTLVELCCK-WGIRVLTVFAFS 148 (275)
Q Consensus 118 ~Gh~~G~~~l~eiv~wc~~-~GI~~lTvYaFS 148 (275)
.|.-.|-.-+..+++|+.+ .|++.+.++...
T Consensus 108 rg~Gig~~ll~~~~~~a~~~~~~~~i~~~~~~ 139 (182)
T 1s7k_A 108 QGQGIMSQSLQALMTHYARRGDIRRFVIKCRV 139 (182)
T ss_dssp CSSSHHHHHHHHHHHHHHHHCSCCEEEEEEET
T ss_pred cCCCHHHHHHHHHHHHHHhhCCccEEEEEecC
Confidence 4555678889999999997 899999998764
No 142
>2dx6_A Hypothetical protein TTHA0132; conserved hypothetical protein, structural genomics, NPPSFA; 1.78A {Thermus thermophilus} PDB: 3v45_A
Probab=24.57 E-value=1.2e+02 Score=24.36 Aligned_cols=41 Identities=17% Similarity=0.139 Sum_probs=35.3
Q ss_pred HHHHHHHHHHHHHcCCCeEEEEeeecCCCCCCHHHHHHHHH
Q 044091 124 VKSLKTLVELCCKWGIRVLTVFAFSSDNWFRPEVEVEFLMS 164 (275)
Q Consensus 124 ~~~l~eiv~wc~~~GI~~lTvYaFSteN~kRp~~EV~~Lm~ 164 (275)
.+.+.+.++.+.+.|++.|.+=++|+.++.=|.+++..+|-
T Consensus 90 ~~~~~~~L~~a~~~~~~sIa~P~igtG~~g~p~~~~a~i~~ 130 (159)
T 2dx6_A 90 RKATKSALEKAVELGLKTVAFPLLGTGVGGLPVEAVARVML 130 (159)
T ss_dssp HHHHHHHHHHHHHTTCSEEEECCTTSSTTCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCcEEEECCccCCCCCCCHHHHHHHHH
Confidence 45566777778889999999999999999999999888764
No 143
>1qsm_A HPA2 histone acetyltransferase; protein-acetyl coenzyme A complex; HET: ACO; 2.40A {Saccharomyces cerevisiae} SCOP: d.108.1.1 PDB: 1qso_A
Probab=24.52 E-value=1.3e+02 Score=21.54 Aligned_cols=33 Identities=18% Similarity=0.044 Sum_probs=26.2
Q ss_pred cchhhhHHHHHHHHHHHHHcCCCeEEEEeeecCC
Q 044091 118 SGYEAGVKSLKTLVELCCKWGIRVLTVFAFSSDN 151 (275)
Q Consensus 118 ~Gh~~G~~~l~eiv~wc~~~GI~~lTvYaFSteN 151 (275)
.|.-.|-.-+..+++|+.+.|++.+.+...+ +|
T Consensus 96 rg~Gig~~ll~~~~~~~~~~g~~~i~l~~~~-~n 128 (152)
T 1qsm_A 96 RVKGAGGKLIQFVYDEADKLGTPSVYWCTDE-SN 128 (152)
T ss_dssp CSSSHHHHHHHHHHHHHHHTTCCCEEEEEET-TC
T ss_pred ccCCHHHHHHHHHHHHHHHcCCCeEEEEeeC-CC
Confidence 3444677888999999999999999998764 34
No 144
>1muw_A Xylose isomerase; atomic resolution, disorder; 0.86A {Streptomyces olivochromogenes} SCOP: c.1.15.3 PDB: 1s5m_A* 1s5n_A* 2gyi_A* 1xyb_A* 1xyc_A* 1xya_A* 1xyl_A 1xym_A* 1dxi_A 3gnx_A* 1gw9_A* 1xib_A 1xic_A* 1xid_A* 1xie_A* 1xif_A* 1xig_A* 1xih_A* 1xii_A* 1xij_A ...
Probab=24.43 E-value=2.6e+02 Score=25.16 Aligned_cols=29 Identities=10% Similarity=-0.090 Sum_probs=21.9
Q ss_pred HHHHHHHHHHcCCCeEEEEeeecCCCCCC
Q 044091 127 LKTLVELCCKWGIRVLTVFAFSSDNWFRP 155 (275)
Q Consensus 127 l~eiv~wc~~~GI~~lTvYaFSteN~kRp 155 (275)
+.+.++.+.++|...|-++......|...
T Consensus 35 ~~e~l~~aa~~G~~~VEl~~~~~~p~~~~ 63 (386)
T 1muw_A 35 PVETVQRLAELGAHGVTFHDDDLIPFGSS 63 (386)
T ss_dssp HHHHHHHHHHHTCCEEEEEHHHHSCTTCC
T ss_pred HHHHHHHHHHcCCCEEEeeCCCCCcccCc
Confidence 78889999999999999876443344443
No 145
>3r9f_A MCCE protein; microcin C7, acetyltransferase, SELF immunity, resistance, A coenzyme A, transferase; HET: COA GSU; 1.20A {Escherichia coli} PDB: 3r95_A* 3r96_A* 3r9e_A* 3r9g_A*
Probab=24.29 E-value=1.2e+02 Score=23.06 Aligned_cols=34 Identities=15% Similarity=0.131 Sum_probs=27.1
Q ss_pred CcchhhhHHHHHHHHHHHHHc-CCCeEEEEeeecCC
Q 044091 117 GSGYEAGVKSLKTLVELCCKW-GIRVLTVFAFSSDN 151 (275)
Q Consensus 117 ~~Gh~~G~~~l~eiv~wc~~~-GI~~lTvYaFSteN 151 (275)
..|.--|.+.+..+++|+.+. |++.|.+..++ +|
T Consensus 115 ~~g~Gig~~ll~~~~~~a~~~~~~~~i~~~v~~-~N 149 (188)
T 3r9f_A 115 FQGKGIVTNAINKLIQEYGDSGVIKRFVIKCIV-DN 149 (188)
T ss_dssp GTTSSHHHHHHHHHHHHHHTTTSCSEEEEEEET-TC
T ss_pred hcCCCHHHHHHHHHHHHHHHhcCeEEEEEEecC-CC
Confidence 345556778899999999876 99999998875 45
No 146
>1bo4_A Protein (serratia marcescens aminoglycoside-3-N- acetyltransferase); eubacterial aminoglyco resistance, GCN5-related N-acetyltransferase; HET: SPD COA; 2.30A {Serratia marcescens} SCOP: d.108.1.1
Probab=23.93 E-value=83 Score=23.18 Aligned_cols=33 Identities=15% Similarity=-0.047 Sum_probs=26.9
Q ss_pred CCcchhhhHHHHHHHHHHHHHcCCCeEEEEeee
Q 044091 116 VGSGYEAGVKSLKTLVELCCKWGIRVLTVFAFS 148 (275)
Q Consensus 116 ~~~Gh~~G~~~l~eiv~wc~~~GI~~lTvYaFS 148 (275)
...|.--|-.-+..+++|+.+.|++.+.++..+
T Consensus 116 ~~rg~Gig~~ll~~~~~~a~~~g~~~i~l~~~~ 148 (168)
T 1bo4_A 116 EHRRQGIATALINLLKHEANALGAYVIYVQADY 148 (168)
T ss_dssp TSTTSSHHHHHHHHHHHHHHHHTCCEEEEECCC
T ss_pred HHhcCCHHHHHHHHHHHHHHhCCCCEEEEEecC
Confidence 344555677889999999999999999998764
No 147
>3pdi_A Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=23.66 E-value=4.7e+02 Score=24.74 Aligned_cols=152 Identities=10% Similarity=0.104 Sum_probs=75.4
Q ss_pred EecCCchHHHHcCCCCCc-----chhhhHHHHHHHHHHH-HHcCCCeEEEEeeecCCCCCCHHHHHHHHH------HHHH
Q 044091 101 IMDGNRRWAHLRGLPVGS-----GYEAGVKSLKTLVELC-CKWGIRVLTVFAFSSDNWFRPEVEVEFLMS------LLES 168 (275)
Q Consensus 101 ImDGNRRwAk~~gl~~~~-----Gh~~G~~~l~eiv~wc-~~~GI~~lTvYaFSteN~kRp~~EV~~Lm~------l~~~ 168 (275)
.+-|+.+|+.-+.++... ++..| ..+.+|. ..+||+++..--+-.++-.+--.++..++. ..+.
T Consensus 235 ~~~gg~~~~el~~~~~A~~niv~~~~~~----~~~A~~Le~~~GiP~i~~~p~Gi~~T~~~L~~ia~~~g~~~i~~~~e~ 310 (483)
T 3pdi_A 235 TLAGDARYREVQTMHRAEVNMMVCSKAM----LNVARKLQETYGTPWFEGSFYGITDTSQALRDFARLLDDPDLTARTEA 310 (483)
T ss_dssp EETSSBCHHHHTTGGGCSEEEEESCCTT----HHHHHHHHHHHCCCEEEECSSSHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred ECCCcCCHHHHHhhhcCCEEEEEchhhH----HHHHHHHHHHhCCCEeecCCCCHHHHHHHHHHHHHHhCCcchhhhHHH
Confidence 456788999998886542 22222 3345554 457999986421221111111111111111 0011
Q ss_pred hHHHH-------HHHhh--cCCcEEEEecCCCCCCHHHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHHH
Q 044091 169 GVKEE-------KESFI--RERIRISVIGDTSKLPKCLEELVINVVETTKNNTRFQLIVAVSYSGQYDLVQACQRIAMKV 239 (275)
Q Consensus 169 ~l~~~-------~~~~~--~~~irvr~iGd~~~LP~~l~~~i~~~e~~T~~~~~~~lniai~YgGR~EIv~A~r~l~~~v 239 (275)
++.++ +..++ -.|.|+-+.|+-+. +-.+...+ .+ -++.+..+..+.+..+-.+..+++.
T Consensus 311 ~i~~er~~~~~al~~~~~~l~GKrv~i~~~~~~-~~~l~~~L---~E-----lGmevv~~gt~~~~~~d~~~~~~~l--- 378 (483)
T 3pdi_A 311 LIAREEAKVRAALEPWRARLEGKRVLLYTGGVK-SWSVVSAL---QD-----LGMKVVATGTKKSTEEDKARIRELM--- 378 (483)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCEEEEECSSSC-HHHHHHHH---HH-----HTCEEEEECBSSSCHHHHHHHHHHS---
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCEEEEECCCch-HHHHHHHH---HH-----CCCEEEEEecCCCCHHHHHHHHHhc---
Confidence 22211 11122 24889999998653 33333333 22 2445555545544444444444332
Q ss_pred hcCCCCCCCCCHHHHHhhhhcCCCCCCCCcEEEe
Q 044091 240 KDGLIEPNDVSESLIEQELETNCTEFPYPDLLIR 273 (275)
Q Consensus 240 ~~g~l~~edI~e~~i~~~L~t~~~~~PdPDLLIR 273 (275)
..+.+-.+|.|...+.+.+... +|||+|=
T Consensus 379 ~~~~~i~~d~d~~el~~~i~~~-----~pDL~ig 407 (483)
T 3pdi_A 379 GDDVKMLDEGNARVLLKTVDEY-----QADILIA 407 (483)
T ss_dssp CSSCCBCCSCSHHHHHHHHHHT-----TCSEEEC
T ss_pred CCCCEEEeCCCHHHHHHHHHhc-----CCCEEEE
Confidence 2344445667788888888653 6999984
No 148
>3jvn_A Acetyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; 2.61A {Vibrio fischeri}
Probab=23.59 E-value=74 Score=23.47 Aligned_cols=33 Identities=6% Similarity=0.030 Sum_probs=26.0
Q ss_pred CcchhhhHHHHHHHHHHHHHcCCCeEEEEeeec
Q 044091 117 GSGYEAGVKSLKTLVELCCKWGIRVLTVFAFSS 149 (275)
Q Consensus 117 ~~Gh~~G~~~l~eiv~wc~~~GI~~lTvYaFSt 149 (275)
..|.--|-.-+..+++|+.+.|++.+.++.+..
T Consensus 100 ~rg~Gig~~ll~~~~~~a~~~g~~~i~l~v~~~ 132 (166)
T 3jvn_A 100 YRREGVAEQLMMRIEQELKDYGVKEIFVEVWDF 132 (166)
T ss_dssp TCSSSHHHHHHHHHHHHHHTTTCSEEEECCC--
T ss_pred HhccCHHHHHHHHHHHHHHHcCCCEEEEEEecC
Confidence 345556778899999999999999999987653
No 149
>1yr0_A AGR_C_1654P, phosphinothricin acetyltransferase; structural genomics, protein structure initiative, NYSGXRC, PSI; 2.00A {Agrobacterium tumefaciens str} SCOP: d.108.1.1
Probab=23.18 E-value=99 Score=23.48 Aligned_cols=32 Identities=16% Similarity=0.210 Sum_probs=26.7
Q ss_pred CcchhhhHHHHHHHHHHHHHcCCCeEEEEeee
Q 044091 117 GSGYEAGVKSLKTLVELCCKWGIRVLTVFAFS 148 (275)
Q Consensus 117 ~~Gh~~G~~~l~eiv~wc~~~GI~~lTvYaFS 148 (275)
..|.--|-+-+..+++|+.+.|++.|.++..+
T Consensus 95 ~rg~Gig~~ll~~~~~~a~~~g~~~i~l~v~~ 126 (175)
T 1yr0_A 95 ARGHGIGKRLMQALIDHAGGNDVHVLIAAIEA 126 (175)
T ss_dssp STTSSHHHHHHHHHHHHHHTTTCCEEEEEEET
T ss_pred ccCCCHHHHHHHHHHHHHHhCCccEEEEEecC
Confidence 44555677889999999999999999998875
No 150
>3tth_A Spermidine N1-acetyltransferase; central intermediary metabolism; 3.30A {Coxiella burnetii}
Probab=22.81 E-value=1.8e+02 Score=21.42 Aligned_cols=34 Identities=15% Similarity=0.174 Sum_probs=26.8
Q ss_pred CcchhhhHHHHHHHHHHHHH-cCCCeEEEEeeecCC
Q 044091 117 GSGYEAGVKSLKTLVELCCK-WGIRVLTVFAFSSDN 151 (275)
Q Consensus 117 ~~Gh~~G~~~l~eiv~wc~~-~GI~~lTvYaFSteN 151 (275)
..|.--|-+-+..+++||.+ +|++.+.+.... +|
T Consensus 95 ~rg~Gig~~ll~~~~~~a~~~~~~~~i~~~~~~-~N 129 (170)
T 3tth_A 95 EEGKGYATEATDLTVEYAFSILNLHKIYLLVDE-DN 129 (170)
T ss_dssp SCSSCSHHHHHHHHHHHHHHTSCCCEEEEEEET-TC
T ss_pred ccCCCHHHHHHHHHHHHHHhhCCceEEEEEecC-CC
Confidence 34555678889999999976 599999998865 35
No 151
>3tcv_A GCN5-related N-acetyltransferase; GRAM negative coccobacillus, brucellosis, acyl CO-A, arylami transferase; 1.75A {Brucella melitensis biovar abortus 230ORGANISM_TAXID}
Probab=22.81 E-value=1.7e+02 Score=24.37 Aligned_cols=36 Identities=17% Similarity=0.158 Sum_probs=29.2
Q ss_pred CCCcchhhhHHHHHHHHHHHHH-cCCCeEEEEeeecCC
Q 044091 115 PVGSGYEAGVKSLKTLVELCCK-WGIRVLTVFAFSSDN 151 (275)
Q Consensus 115 ~~~~Gh~~G~~~l~eiv~wc~~-~GI~~lTvYaFSteN 151 (275)
+...|.-.|-+.+..+++||.+ +|+..|.+..++ +|
T Consensus 136 p~~rgkGig~~ll~~ll~~a~~~~g~~~i~l~v~~-~N 172 (246)
T 3tcv_A 136 PLISRRPAATEAQFLFMQYVFDVLGYRRYEWECHN-EN 172 (246)
T ss_dssp TTTTTSHHHHHHHHHHHHHHHHTSCCSEEEEEEET-TC
T ss_pred HHHcCCCHHHHHHHHHHHHHHHhcCcEEEEEEccC-CC
Confidence 3455666778899999999988 699999999875 35
No 152
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=22.76 E-value=99 Score=27.16 Aligned_cols=22 Identities=9% Similarity=0.134 Sum_probs=11.7
Q ss_pred HHHHHHHHHHHHHcCCCeEEEE
Q 044091 124 VKSLKTLVELCCKWGIRVLTVF 145 (275)
Q Consensus 124 ~~~l~eiv~wc~~~GI~~lTvY 145 (275)
.+.+.++++.+.+.|+..|.+.
T Consensus 154 ~~~~~~~~~~~~~~G~d~i~l~ 175 (295)
T 1ydn_A 154 PQAVASVTEQLFSLGCHEVSLG 175 (295)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEE
T ss_pred HHHHHHHHHHHHhcCCCEEEec
Confidence 4455555555555555555554
No 153
>3lod_A Putative acyl-COA N-acyltransferase; structural genomics, PSI2, MCSG, structure initiative; 2.50A {Klebsiella pneumoniae subsp}
Probab=22.56 E-value=1.1e+02 Score=22.46 Aligned_cols=33 Identities=18% Similarity=0.070 Sum_probs=27.2
Q ss_pred CcchhhhHHHHHHHHHHHHHcCCCeEEEEeeec
Q 044091 117 GSGYEAGVKSLKTLVELCCKWGIRVLTVFAFSS 149 (275)
Q Consensus 117 ~~Gh~~G~~~l~eiv~wc~~~GI~~lTvYaFSt 149 (275)
..|.--|-.-+..+++|+.+.|++.+.+.....
T Consensus 86 ~rg~Gig~~ll~~~~~~~~~~g~~~i~l~~~~~ 118 (162)
T 3lod_A 86 HRGQQLGEKLLAALEAKARQRDCHTLRLETGIH 118 (162)
T ss_dssp SCSSSHHHHHHHHHHHHHHTTTCCEEEEEEETT
T ss_pred HcCCCHHHHHHHHHHHHHHHCCCcEEEEEecCC
Confidence 445557788899999999999999999987653
No 154
>2dxq_A AGR_C_4057P, acetyltransferase; structural genomics, PSI-2, protein struc initiative, midwest center for structural genomics, MCSG; 1.80A {Agrobacterium tumefaciens str}
Probab=22.36 E-value=88 Score=23.31 Aligned_cols=33 Identities=9% Similarity=0.041 Sum_probs=27.2
Q ss_pred CCcchhhhHHHHHHHHHHHHHcCCCeEEEEeee
Q 044091 116 VGSGYEAGVKSLKTLVELCCKWGIRVLTVFAFS 148 (275)
Q Consensus 116 ~~~Gh~~G~~~l~eiv~wc~~~GI~~lTvYaFS 148 (275)
...|.-.|-.-+..+++||.+.|+..|.+..+.
T Consensus 92 ~~rg~GiG~~Ll~~~~~~a~~~g~~~i~l~v~~ 124 (150)
T 2dxq_A 92 ARRGRGYGRTVVRHAIETAFGANCYKVMLLTGR 124 (150)
T ss_dssp GGTTSSHHHHHHHHHHHHHHHTTCSEEEEEECC
T ss_pred HHhCCCHHHHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 344656777889999999999999999998765
No 155
>2h7b_A Core-binding factor, ML1-ETO; helix bundle, transcription; NMR {Homo sapiens} SCOP: a.277.1.1 PDB: 2pp4_A 2knh_A
Probab=22.28 E-value=67 Score=25.06 Aligned_cols=40 Identities=5% Similarity=0.054 Sum_probs=25.8
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCCCHHHHHhhhhcCCCCCCCCcE
Q 044091 226 YDLVQACQRIAMKVKDGLIEPNDVSESLIEQELETNCTEFPYPDL 270 (275)
Q Consensus 226 ~EIv~A~r~l~~~v~~g~l~~edI~e~~i~~~L~t~~~~~PdPDL 270 (275)
.|+.+-+|+|+..+.+|++++ |.|...|+....--|.|.|
T Consensus 25 pev~~~Vr~LVq~Ll~~~i~~-----EeFt~~Lq~~lns~pqP~l 64 (105)
T 2h7b_A 25 PEIGERVRTLVLGLVNSTLTI-----EEFHSKLQEATNFPLRPFV 64 (105)
T ss_dssp HHHHHHHHHHHHHHHTSSCCH-----HHHHHHHHHHSSSSCCSSS
T ss_pred hHHHHHHHHHHHHHHhCCCCH-----HHHHHHHHHHhcCCCCcch
Confidence 578888999999988887654 5555555542112245654
No 156
>1yre_A Hypothetical protein PA3270; APC5563, midwest center for structural genomics, MSC protein structure initiative, PSI, MCSG; HET: COA; 2.15A {Pseudomonas aeruginosa} SCOP: d.108.1.1
Probab=22.24 E-value=1.6e+02 Score=22.51 Aligned_cols=33 Identities=6% Similarity=-0.022 Sum_probs=26.6
Q ss_pred cchhhhHHHHHHHHHHHHH-cCCCeEEEEeeecCC
Q 044091 118 SGYEAGVKSLKTLVELCCK-WGIRVLTVFAFSSDN 151 (275)
Q Consensus 118 ~Gh~~G~~~l~eiv~wc~~-~GI~~lTvYaFSteN 151 (275)
.|.--|-+.+..+++|+.+ .|++.|.+..+. +|
T Consensus 109 rg~Gig~~ll~~~~~~a~~~~g~~~i~~~v~~-~N 142 (197)
T 1yre_A 109 HGSGLNRMIKYLMLKHAFDNLRMVRVQLSTAA-SN 142 (197)
T ss_dssp TTTTHHHHHHHHHHHHHHHTSCCSEEEEEEET-TC
T ss_pred hcCCHHHHHHHHHHHHHHhhcCccEEEEEEcC-CC
Confidence 4545677889999999999 899999998764 35
No 157
>1yd9_A Core histone macro-H2A.1; alpha-beta structure, A1PP domain, macro-domain, structural protein; 1.60A {Rattus norvegicus} SCOP: c.50.1.2 PDB: 1zr3_A* 2fxk_A 3iid_A* 3iif_A* 1zr5_A
Probab=22.20 E-value=1.3e+02 Score=25.12 Aligned_cols=40 Identities=15% Similarity=0.135 Sum_probs=32.9
Q ss_pred HHHHHHHHHHHHcCCCeEEEEeeecCCCCCCHHHHHHHHH
Q 044091 125 KSLKTLVELCCKWGIRVLTVFAFSSDNWFRPEVEVEFLMS 164 (275)
Q Consensus 125 ~~l~eiv~wc~~~GI~~lTvYaFSteN~kRp~~EV~~Lm~ 164 (275)
+...+.++.+.+.|++.|.+=+.|+.++.=|.+++..+|-
T Consensus 113 ~~y~~~L~~a~~~~~~SIAfP~IstG~~g~p~~~aa~i~~ 152 (193)
T 1yd9_A 113 KTVKNCLALADDRKLKSIAFPSIGSGRNGFPKQTAAQLIL 152 (193)
T ss_dssp HHHHHHHHHHHHTTCSEEEECCCSBSTTCBCHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCceEeecccccCCCCCCHHHHHHHHH
Confidence 4455566666778999999999999999999999887663
No 158
>3v32_B Ribonuclease ZC3H12A; rossmann-like sandwich fold, RNAse, cytoplastic, hydrolase; 2.00A {Homo sapiens} PDB: 3v34_A
Probab=22.17 E-value=66 Score=27.31 Aligned_cols=47 Identities=26% Similarity=0.228 Sum_probs=33.2
Q ss_pred CCCCEEEEEecC-CchHHHHcCCCCCcchhhhHHHHHHHHHHHHHcCCCeEEEEee
Q 044091 93 SMPRHVAVIMDG-NRRWAHLRGLPVGSGYEAGVKSLKTLVELCCKWGIRVLTVFAF 147 (275)
Q Consensus 93 ~iPrHIAiImDG-NRRwAk~~gl~~~~Gh~~G~~~l~eiv~wc~~~GI~~lTvYaF 147 (275)
...|+| |+|| |=-|+...+ ....+..+..+++|..+.|.+.++||.=
T Consensus 22 ~~lR~I--VIDGsNVA~~~g~~------~~Fs~rgI~~aV~yf~~rGh~~v~VfvP 69 (185)
T 3v32_B 22 SDLRPV--VIDGSNVAMSHGNK------EVFSCRGILLAVNWFLERGHTDITVFVP 69 (185)
T ss_dssp -CBCCE--EEEHHHHHHHHTTT------TSEEHHHHHHHHHHHHHTTCCCEEEEEE
T ss_pred CCCCeE--EEeCHHHHhhhCCC------CCcCHHHHHHHHHHHHHcCCCceEEEec
Confidence 344666 7898 544444321 2346788999999999999999999863
No 159
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=22.15 E-value=1.7e+02 Score=25.72 Aligned_cols=43 Identities=5% Similarity=-0.038 Sum_probs=22.0
Q ss_pred hHHHHHHHHHHHHHcCCCeEEEEeeecCCCCCCHHHHHHHHHHHHH
Q 044091 123 GVKSLKTLVELCCKWGIRVLTVFAFSSDNWFRPEVEVEFLMSLLES 168 (275)
Q Consensus 123 G~~~l~eiv~wc~~~GI~~lTvYaFSteN~kRp~~EV~~Lm~l~~~ 168 (275)
-.+.+.++++...++|+..+.+.+-.. -=.+.++..+++.+.+
T Consensus 154 ~~~~~~~~~~~~~~~Ga~~i~l~DT~G---~~~P~~~~~lv~~l~~ 196 (298)
T 2cw6_A 154 SPAKVAEVTKKFYSMGCYEISLGDTIG---VGTPGIMKDMLSAVMQ 196 (298)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEEETTS---CCCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEecCCCC---CcCHHHHHHHHHHHHH
Confidence 345566666666666666655543211 1234555555554443
No 160
>1xla_A D-xylose isomerase; isomerase(intramolecular oxidoreductase); 2.30A {Arthrobacter SP} SCOP: c.1.15.3 PDB: 1die_A* 1did_A 1xlb_A 1xlc_A* 1xld_A* 1xle_A 1xlf_A* 1xlg_A* 1xlh_A 1xli_A* 1xlj_A* 1xlk_A 1xll_A 1xlm_A* 4xia_A* 5xia_A*
Probab=22.04 E-value=4.4e+02 Score=23.75 Aligned_cols=22 Identities=14% Similarity=-0.013 Sum_probs=18.9
Q ss_pred HHHHHHHHHHcCCCeEEEEeee
Q 044091 127 LKTLVELCCKWGIRVLTVFAFS 148 (275)
Q Consensus 127 l~eiv~wc~~~GI~~lTvYaFS 148 (275)
+.+.++++.++|+..|-++...
T Consensus 35 l~e~l~~aa~~G~d~VEl~~~~ 56 (394)
T 1xla_A 35 PVEAVHKLAELGAYGITFHDND 56 (394)
T ss_dssp HHHHHHHHHHHTCCEEEEEHHH
T ss_pred HHHHHHHHHHcCCCEEEecCCc
Confidence 7888999999999999987643
No 161
>1mio_A Nitrogenase molybdenum iron protein (alpha chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=22.01 E-value=2e+02 Score=27.89 Aligned_cols=47 Identities=15% Similarity=0.212 Sum_probs=28.3
Q ss_pred EEEEecCCchHHHHcCCCCCcchh-hhHHHHHHHHHHHH-HcCCCeEEEE
Q 044091 98 VAVIMDGNRRWAHLRGLPVGSGYE-AGVKSLKTLVELCC-KWGIRVLTVF 145 (275)
Q Consensus 98 IAiImDGNRRwAk~~gl~~~~Gh~-~G~~~l~eiv~wc~-~~GI~~lTvY 145 (275)
+++++ |+.+|+.-+.++....=. .+......+.++.. .+||+++.+-
T Consensus 236 ~~~~~-gg~t~~ei~~~~~A~~niv~~~~~~~~~A~~Leer~GiP~i~~~ 284 (533)
T 1mio_A 236 NATLT-GDATYEKVQNADKADLNLVQCHRSINYIAEMMETKYGIPWIKCN 284 (533)
T ss_dssp EEEEE-TTCCHHHHHBTTSCSEEEESCHHHHHHHHHHHHHHHCCCEEECC
T ss_pred EEEeC-CCCCHHHHHhhhcCCEEEEECHHHHHHHHHHHHHHhCCCeEEec
Confidence 44444 888999988887643111 11122344566654 4799999963
No 162
>1tiq_A Protease synthase and sporulation negative regulatory protein PAI 1; alpha-beta protein, structural genomics, PSI; HET: COA; 1.90A {Bacillus subtilis} SCOP: d.108.1.1
Probab=21.91 E-value=92 Score=24.06 Aligned_cols=32 Identities=9% Similarity=0.094 Sum_probs=26.3
Q ss_pred cchhhhHHHHHHHHHHHHHcCCCeEEEEeeec
Q 044091 118 SGYEAGVKSLKTLVELCCKWGIRVLTVFAFSS 149 (275)
Q Consensus 118 ~Gh~~G~~~l~eiv~wc~~~GI~~lTvYaFSt 149 (275)
.|.--|-.-+..+++||.+.|++.|.+.+++.
T Consensus 103 rg~GiG~~Ll~~~~~~a~~~g~~~i~L~v~~~ 134 (180)
T 1tiq_A 103 QKHGLGKHLLNKAIEIALERNKKNIWLGVWEK 134 (180)
T ss_dssp CSSSHHHHHHHHHHHHHHHTTCSEEEEEEETT
T ss_pred hCCCHHHHHHHHHHHHHHHCCCCEEEEEehhc
Confidence 45556778888999999999999999988753
No 163
>1s3z_A Aminoglycoside 6'-N-acetyltransferase; GNAT, aminoglycoside ribostamycin; HET: COA RIO; 2.00A {Salmonella enteritidis} SCOP: d.108.1.1 PDB: 1s5k_A* 1s60_A* 2vbq_A*
Probab=21.86 E-value=87 Score=23.28 Aligned_cols=31 Identities=6% Similarity=-0.033 Sum_probs=26.0
Q ss_pred cchhhhHHHHHHHHHHHHHcCCCeEEEEeee
Q 044091 118 SGYEAGVKSLKTLVELCCKWGIRVLTVFAFS 148 (275)
Q Consensus 118 ~Gh~~G~~~l~eiv~wc~~~GI~~lTvYaFS 148 (275)
.|.-.|-.-+..+++|+.+.|++.+.++.+.
T Consensus 108 rg~Gig~~ll~~~~~~~~~~g~~~i~l~~~~ 138 (165)
T 1s3z_A 108 RQRGVAKQLIAAVQRWGTNKGCREMASDTSP 138 (165)
T ss_dssp CSSSHHHHHHHHHHHHHHHTTCSEEEEEECT
T ss_pred cCCcHHHHHHHHHHHHHHHCCCCEEEEecCc
Confidence 4555677889999999999999999998764
No 164
>3g8w_A Lactococcal prophage PS3 protein 05; APC61042, acetyltransferase, staphylococcus epidermidis ATCC structural genomics; HET: NHE FLC; 2.70A {Staphylococcus epidermidis atcc 12228}
Probab=21.63 E-value=1.1e+02 Score=22.56 Aligned_cols=32 Identities=9% Similarity=0.099 Sum_probs=26.3
Q ss_pred cchhhhHHHHHHHHHHHHHcCCCeEEEEeeec
Q 044091 118 SGYEAGVKSLKTLVELCCKWGIRVLTVFAFSS 149 (275)
Q Consensus 118 ~Gh~~G~~~l~eiv~wc~~~GI~~lTvYaFSt 149 (275)
.|.--|-.-+..+++||.+.|++.|.+..++.
T Consensus 94 rg~Gig~~ll~~~~~~a~~~g~~~i~l~v~~~ 125 (169)
T 3g8w_A 94 NDEIVNRELINHIIQYAKEQNIETLMIAIASN 125 (169)
T ss_dssp GCHHHHHHHHHHHHHHHHHTTCCEEEEEEETT
T ss_pred CCCcHHHHHHHHHHHHHHHCCCCEEEEEEecC
Confidence 34456778899999999999999999888753
No 165
>3t7v_A Methylornithine synthase PYLB; TIM-barrel fold, mutase, [4Fe-4S]-cluster, SAM, lysine, transferase; HET: SAM MD0; 1.50A {Methanosarcina barkeri}
Probab=21.47 E-value=71 Score=28.54 Aligned_cols=17 Identities=6% Similarity=-0.056 Sum_probs=9.5
Q ss_pred HHHHHHHHHHHHHcCCC
Q 044091 124 VKSLKTLVELCCKWGIR 140 (275)
Q Consensus 124 ~~~l~eiv~wc~~~GI~ 140 (275)
++...+.++++.+.|++
T Consensus 187 ~~~~l~~i~~a~~~Gi~ 203 (350)
T 3t7v_A 187 FDGRVNARRFAKQQGYC 203 (350)
T ss_dssp HHHHHHHHHHHHHHTCE
T ss_pred HHHHHHHHHHHHHcCCe
Confidence 45555555555555554
No 166
>2jvf_A De novo protein M7; tetrapeptide fragment-based protein design, artificial fold; NMR {Unidentified} SCOP: k.41.1.1
Probab=21.45 E-value=2.5e+02 Score=20.62 Aligned_cols=56 Identities=20% Similarity=0.350 Sum_probs=39.2
Q ss_pred HHHHHHHHHHHHcCCCeEEEEeeecCCCCCCHHHHHHHHHHHHHhHHHHHHHhhcCCcEEEEecC
Q 044091 125 KSLKTLVELCCKWGIRVLTVFAFSSDNWFRPEVEVEFLMSLLESGVKEEKESFIRERIRISVIGD 189 (275)
Q Consensus 125 ~~l~eiv~wc~~~GI~~lTvYaFSteN~kRp~~EV~~Lm~l~~~~l~~~~~~~~~~~irvr~iGd 189 (275)
+.+.++-......|-+.+-+ ..|.|| .++-..|++++.+.+.+ +--.+|.+|+-|.
T Consensus 33 ralqelekalaragarnvqi-tisaen----deqakelleliarllqk----lgykdinvrvngt 88 (96)
T 2jvf_A 33 RALQELEKALARAGARNVQI-TISAEN----DEQAKELLELIARLLQK----LGYKDINVRVNGT 88 (96)
T ss_dssp HHHHHHHHHHHHHTCSEEEE-EEECSS----HHHHHHHHHHHHHHHHH----HTCSEEEEEEETT
T ss_pred HHHHHHHHHHHhccccceEE-EEEecC----hHHHHHHHHHHHHHHHH----hCCCceEEEEcCE
Confidence 45666666777789999887 668888 45566788887776653 3445677887774
No 167
>3gpg_A NSP3, non-structural protein 3; macro domain, X domain, alphavirus, VIZI enzymes involved in replication, ATP-binding, cell membrane endosome; 1.65A {Chikungunya virus} PDB: 3gpo_A* 3gpq_A
Probab=21.36 E-value=1.2e+02 Score=25.03 Aligned_cols=38 Identities=5% Similarity=0.113 Sum_probs=31.7
Q ss_pred HHHHHHHHHHHHcCCCeEEEEeeecCCCCCCHHHHHHH
Q 044091 125 KSLKTLVELCCKWGIRVLTVFAFSSDNWFRPEVEVEFL 162 (275)
Q Consensus 125 ~~l~eiv~wc~~~GI~~lTvYaFSteN~kRp~~EV~~L 162 (275)
+..++.++.|.+.|++.|.|=+.|+..+.=|.+++...
T Consensus 95 ~~y~~~L~~A~~~~~~SIAfP~IstGi~g~P~~~aa~a 132 (168)
T 3gpg_A 95 AAYREVAKEVTRLGVNSVAIPLLSTGVYSGGKDRLTQS 132 (168)
T ss_dssp HHHHHHHHHHHHHTCSEEEEECTTSSTTSTTSCCHHHH
T ss_pred HHHHHHHHHHHHhCCcEEEECccccCCCCCCHHHHHHH
Confidence 34556677777899999999999999999999988773
No 168
>3fix_A N-acetyltransferase; termoplasma acidophilum, structural GEN PSI-2, protein structure initiative, midwest center for STR genomics, MCSG; 2.30A {Thermoplasma acidophilum} PDB: 3f0a_A* 3k9u_A* 3ne7_A*
Probab=21.23 E-value=94 Score=23.67 Aligned_cols=34 Identities=15% Similarity=0.059 Sum_probs=27.9
Q ss_pred CCcchhhhHHHHHHHHHHHHHcCCCeEEEEeeec
Q 044091 116 VGSGYEAGVKSLKTLVELCCKWGIRVLTVFAFSS 149 (275)
Q Consensus 116 ~~~Gh~~G~~~l~eiv~wc~~~GI~~lTvYaFSt 149 (275)
...|.--|-.-+..+++||.+.|++.+.++....
T Consensus 121 ~~rg~Gig~~Ll~~~~~~a~~~g~~~i~l~v~~~ 154 (183)
T 3fix_A 121 EYTHKKIGKTLLLEAEKIMKKKGILECRLYVHRQ 154 (183)
T ss_dssp GGCCHHHHHHHHHHHHHHHHHHTCCEEEEEEETT
T ss_pred HHcCCCHHHHHHHHHHHHHHHcCCceEEEEEecC
Confidence 3456667788899999999999999999988653
No 169
>2fsr_A Acetyltransferase; alpha-beta-sandwich, structural genomics, PSI, protein struc initiative, midwest center for structural genomics; HET: PEG; 1.52A {Agrobacterium tumefaciens str} SCOP: d.108.1.1
Probab=21.12 E-value=1.7e+02 Score=22.92 Aligned_cols=35 Identities=11% Similarity=0.144 Sum_probs=27.5
Q ss_pred CCcchhhhHHHHHHHHHHHHH-cCCCeEEEEeeecCC
Q 044091 116 VGSGYEAGVKSLKTLVELCCK-WGIRVLTVFAFSSDN 151 (275)
Q Consensus 116 ~~~Gh~~G~~~l~eiv~wc~~-~GI~~lTvYaFSteN 151 (275)
...|.-.|-+.+..+++|+.+ .|++.|.++... +|
T Consensus 122 ~~rg~Gig~~ll~~~~~~a~~~~g~~~i~l~v~~-~N 157 (195)
T 2fsr_A 122 GHEGRGYAAEAAVALRDWAFETLNLPTLVSYVSP-QN 157 (195)
T ss_dssp TCTTSSHHHHHHHHHHHHHHHHSCCSCEEEEECT-TC
T ss_pred hHcCCChHHHHHHHHHHHHHhhCCccEEEEEECC-CC
Confidence 344555677889999999998 799999998864 35
No 170
>3aal_A Probable endonuclease 4; endoiv, DNA repair, base excision repair, TIM barrel, DNA DA endonuclease, hydrolase, metal-binding; 1.60A {Geobacillus kaustophilus} PDB: 1xp3_A
Probab=21.10 E-value=1.8e+02 Score=24.85 Aligned_cols=62 Identities=15% Similarity=0.112 Sum_probs=39.4
Q ss_pred chhhhHHHHHHHHHHHHHcCCCeEEEEeeecCCCCCCHHHHHHHHHHHHHhHHHHHHHhhcCCcEEEEe
Q 044091 119 GYEAGVKSLKTLVELCCKWGIRVLTVFAFSSDNWFRPEVEVEFLMSLLESGVKEEKESFIRERIRISVI 187 (275)
Q Consensus 119 Gh~~G~~~l~eiv~wc~~~GI~~lTvYaFSteN~kRp~~EV~~Lm~l~~~~l~~~~~~~~~~~irvr~i 187 (275)
-..+..+.+.+.+++|..+|++.+.++.-+.. .++.+| -++.+.+.|++..+.. .||++-+-
T Consensus 88 ~r~~~~~~~~~~i~~A~~lGa~~vv~h~g~~~--~~~~~~---~~~~~~~~l~~l~~~a--~gv~l~lE 149 (303)
T 3aal_A 88 TFSLGVDFLRAEIERTEAIGAKQLVLHPGAHV--GAGVEA---GLRQIIRGLNEVLTRE--QNVQIALE 149 (303)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCSEEEECCEECT--TSCHHH---HHHHHHHHHHHHCCSS--CSCEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHcCCCEEEECCCcCC--CCCHHH---HHHHHHHHHHHHHHhC--CCCEEEEe
Confidence 34667899999999999999999988654331 223332 2334444454333323 68888663
No 171
>3q6z_A Poly [ADP-ribose] polymerase 14; structural genomics consortium, SGC, ADP-ribose binding, TRA; HET: APR; 2.23A {Homo sapiens}
Probab=21.07 E-value=1.4e+02 Score=25.62 Aligned_cols=46 Identities=17% Similarity=0.145 Sum_probs=35.9
Q ss_pred HHHHHHHHHHHHcCCCeEEEEeeecCCCCCCHHHHHHHH-HHHHHhH
Q 044091 125 KSLKTLVELCCKWGIRVLTVFAFSSDNWFRPEVEVEFLM-SLLESGV 170 (275)
Q Consensus 125 ~~l~eiv~wc~~~GI~~lTvYaFSteN~kRp~~EV~~Lm-~l~~~~l 170 (275)
+...+.++.|.+.|++.|.+=+.|+.++.=|.++...+| +.+.+++
T Consensus 134 ~~y~~~L~~A~~~~i~SIAfP~IstG~~g~P~~~aA~i~~~av~~fl 180 (214)
T 3q6z_A 134 RAVQLSLCLAEKYKYRSIAIPAISSGVFGFPLGRCVETIVSAIKENF 180 (214)
T ss_dssp HHHHHHHHHHHHTTCSEEEECCTTSSTTCCCHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHcCCcEEEECcccCCCCCCCHHHHHHHHHHHHHHHH
Confidence 445567777788999999999999999999999987765 3344444
No 172
>2fe7_A Probable N-acetyltransferase; structural genomics, pseudomonas aerugi PSI, protein structure initiative; 2.00A {Pseudomonas aeruginosa ucbpp-pa14} SCOP: d.108.1.1
Probab=21.01 E-value=1.1e+02 Score=22.41 Aligned_cols=32 Identities=19% Similarity=0.114 Sum_probs=25.3
Q ss_pred cchhhhHHHHHHHHHHHHHcCCCeEEEEeeec
Q 044091 118 SGYEAGVKSLKTLVELCCKWGIRVLTVFAFSS 149 (275)
Q Consensus 118 ~Gh~~G~~~l~eiv~wc~~~GI~~lTvYaFSt 149 (275)
.|.--|-.-+..+++++.+.|++.+.++.++.
T Consensus 101 rg~Gig~~ll~~~~~~~~~~g~~~i~l~~~~~ 132 (166)
T 2fe7_A 101 RGVGAGRRLLRELAREAVANDCGRLEWSVLDW 132 (166)
T ss_dssp CC--HHHHHHHHHHHHHHHTTCSEEEEEEETT
T ss_pred cCccHHHHHHHHHHHHHHHCCCCEEEEEEccC
Confidence 45556778889999999999999999988753
No 173
>2fck_A Ribosomal-protein-serine acetyltransferase, putat; ribosomal-protein structural genomics, PSI, protein structure initiative; HET: MSE; 1.70A {Vibrio cholerae o1 biovar eltor} SCOP: d.108.1.1
Probab=20.96 E-value=1e+02 Score=23.00 Aligned_cols=30 Identities=17% Similarity=0.301 Sum_probs=24.7
Q ss_pred chhhhHHHHHHHHHHHHH-cCCCeEEEEeee
Q 044091 119 GYEAGVKSLKTLVELCCK-WGIRVLTVFAFS 148 (275)
Q Consensus 119 Gh~~G~~~l~eiv~wc~~-~GI~~lTvYaFS 148 (275)
|.--|-.-+..+++|+.+ +|++.|.++..+
T Consensus 111 g~Gig~~ll~~~~~~a~~~~g~~~i~~~~~~ 141 (181)
T 2fck_A 111 RQGYGKEALTALILFCFERLELTRLEIVCDP 141 (181)
T ss_dssp TTTHHHHHHHHHHHHHHHTSCCSEEEEEECT
T ss_pred CCChHHHHHHHHHHHHHHhcCceEEEEEEcc
Confidence 444677889999999999 599999998764
No 174
>3u7q_B Nitrogenase molybdenum-iron protein beta chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1fp4_B* 1g21_B* 1g20_B* 1m1n_B* 1l5h_B* 1m1y_B* 1m34_B* 1n2c_B* 2afh_B* 2afi_B* 2afk_B* 2min_B* 3k1a_B* 3min_B*
Probab=20.78 E-value=5.7e+02 Score=24.58 Aligned_cols=81 Identities=17% Similarity=0.144 Sum_probs=42.5
Q ss_pred CCcEEEEecCCCCCCHHHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHHHhcC--CCCCCCCCHHHHHhh
Q 044091 180 ERIRISVIGDTSKLPKCLEELVINVVETTKNNTRFQLIVAVSYSGQYDLVQACQRIAMKVKDG--LIEPNDVSESLIEQE 257 (275)
Q Consensus 180 ~~irvr~iGd~~~LP~~l~~~i~~~e~~T~~~~~~~lniai~YgGR~EIv~A~r~l~~~v~~g--~l~~edI~e~~i~~~ 257 (275)
.|.|+-+.|+.+ ......+-+.+ -++.+..++.-.+..+..+.++.++++...| ..-.++-|...+.+.
T Consensus 363 ~GKrvaI~gd~~----~~~~la~fL~e-----lGm~vv~v~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~~~D~~~l~~~ 433 (523)
T 3u7q_B 363 HGKRFALWGDPD----FVMGLVKFLLE-----LGCEPVHILCHNGNKRWKKAVDAILAASPYGKNATVYIGKDLWHLRSL 433 (523)
T ss_dssp TTCEEEEECSHH----HHHHHHHHHHH-----TTCEEEEEEETTCCHHHHHHHHHHHHTSGGGTTCEEEESCCHHHHHHH
T ss_pred CCCEEEEECCch----HHHHHHHHHHH-----cCCEEEEEEeCCCCHHHHHHHHHHHhhccCCCCcEEEECCCHHHHHHH
Confidence 478999999742 22222222332 3555444443333344455566555432111 111124477778888
Q ss_pred hhcCCCCCCCCcEEEec
Q 044091 258 LETNCTEFPYPDLLIRT 274 (275)
Q Consensus 258 L~t~~~~~PdPDLLIRT 274 (275)
+... +|||+|=.
T Consensus 434 i~~~-----~pDLlig~ 445 (523)
T 3u7q_B 434 VFTD-----KPDFMIGN 445 (523)
T ss_dssp HHHT-----CCSEEEEC
T ss_pred HHhc-----CCCEEEEC
Confidence 7653 59999844
No 175
>2oh1_A Acetyltransferase, GNAT family; YP_013287.1, structural genom joint center for structural genomics, JCSG, protein structu initiative; HET: MSE UNL; 1.46A {Listeria monocytogenes str}
Probab=20.76 E-value=99 Score=23.09 Aligned_cols=31 Identities=10% Similarity=0.087 Sum_probs=25.7
Q ss_pred cchhhhHHHHHHHHHHHHHcCCCeEEEEeee
Q 044091 118 SGYEAGVKSLKTLVELCCKWGIRVLTVFAFS 148 (275)
Q Consensus 118 ~Gh~~G~~~l~eiv~wc~~~GI~~lTvYaFS 148 (275)
.|.--|-.-+..+++||.+.|++.+.+.++.
T Consensus 116 rg~Gig~~ll~~~~~~a~~~g~~~i~l~~~~ 146 (179)
T 2oh1_A 116 SGISLSKQMIYFAEKLGIEMSVPFIRLDCIE 146 (179)
T ss_dssp TTSCHHHHHHHHHHHHHHHTTCCEEEEEEET
T ss_pred cCCCHHHHHHHHHHHHHHHcCCCEEEEEecC
Confidence 3444677889999999999999999998874
No 176
>1vhu_A Hypothetical protein AF1521; structural genomics, unknown function; HET: MSE MES; 1.34A {Archaeoglobus fulgidus} SCOP: c.50.1.2 PDB: 2bfq_A* 1hjz_A* 2bfr_A*
Probab=20.58 E-value=1.3e+02 Score=25.64 Aligned_cols=39 Identities=15% Similarity=0.037 Sum_probs=33.6
Q ss_pred HHHHHHHHHHHHcCCCeEEEEeeecCCCCCCHHHHHHHH
Q 044091 125 KSLKTLVELCCKWGIRVLTVFAFSSDNWFRPEVEVEFLM 163 (275)
Q Consensus 125 ~~l~eiv~wc~~~GI~~lTvYaFSteN~kRp~~EV~~Lm 163 (275)
+...+.++.|.+.|++.|.+=++|+.++.=|.+++..+|
T Consensus 127 ~~y~~~L~~A~~~~i~SIAfP~IstG~~G~p~~~aa~i~ 165 (211)
T 1vhu_A 127 KAFLGPLEKAEEMGVESIAFPAVSAGIYGCDLEKVVETF 165 (211)
T ss_dssp HHHHHHHHHHHHHTCCEEEECCTTSSTTCCCHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEeccccCCCCCCCHHHHHHHH
Confidence 456667777788899999999999999999999988865
No 177
>2jlm_A Putative phosphinothricin N-acetyltransferase; methionine sulfoximine; 2.35A {Acinetobacter baylyi}
Probab=20.56 E-value=1.2e+02 Score=23.40 Aligned_cols=34 Identities=12% Similarity=0.117 Sum_probs=27.6
Q ss_pred CcchhhhHHHHHHHHHHHHHcCCCeEEEEeeecCC
Q 044091 117 GSGYEAGVKSLKTLVELCCKWGIRVLTVFAFSSDN 151 (275)
Q Consensus 117 ~~Gh~~G~~~l~eiv~wc~~~GI~~lTvYaFSteN 151 (275)
..|.--|-+.+..+++|+.+.|+..|.+..++. |
T Consensus 102 ~rg~Gig~~ll~~~~~~a~~~g~~~i~l~v~~~-N 135 (182)
T 2jlm_A 102 YRGLGLSKHLMNELIKRAVESEVHVMVGCIDAT-N 135 (182)
T ss_dssp STTSSHHHHHHHHHHHHHHHTTCCEEEEEEETT-C
T ss_pred hcCCCHHHHHHHHHHHHHHHCCceEEEEEEeCC-C
Confidence 345556778899999999999999999988753 5
No 178
>1wn9_A The hypothetical protein (TT1805); thermus thermophillus, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.58A {Thermus thermophilus} SCOP: d.319.1.1 PDB: 1wna_A
Probab=20.52 E-value=1.2e+02 Score=24.41 Aligned_cols=65 Identities=26% Similarity=0.203 Sum_probs=43.4
Q ss_pred hHHHHhccCCCCCCE-EEEEec--CCchHHHHcCC--------------CCCcchhhhHHHHHHHHHHHHHcCCCeEEEE
Q 044091 83 PALAEELQRESMPRH-VAVIMD--GNRRWAHLRGL--------------PVGSGYEAGVKSLKTLVELCCKWGIRVLTVF 145 (275)
Q Consensus 83 ~~l~~~l~~~~iPrH-IAiImD--GNRRwAk~~gl--------------~~~~Gh~~G~~~l~eiv~wc~~~GI~~lTvY 145 (275)
+.+...++.-.+|.- |-+|-| |.|-||+-.-+ -...| .|.+.+.|++.|..+.|++...==
T Consensus 15 ~Al~~aLk~~~fp~~~v~liTDwQd~R~~ARYa~ll~~gk~~llt~dAFGPafg--~G~~ALaELv~wl~~~G~~~f~Ea 92 (131)
T 1wn9_A 15 EALKAALGGLKLSEAKVYLITDWQDKRDQARYALLLHTGKKDLLVPDAFGPAFP--GGEEALSELVGLLLAQGARRFYEA 92 (131)
T ss_dssp HHHHHHHTTCCCTTCEEEEEEECCSSGGGCCEEEEEECSSCEEEEEEEESTTST--THHHHHHHHHHHHHHTTCCEEEEE
T ss_pred HHHHHHHccCCCCCceEEEEecccccchhhhhhheeecCCcccccccccCCCcc--cHHHHHHHHHHHHHHcCCchhhhh
Confidence 345555666777764 556666 56666653311 12344 889999999999999999966555
Q ss_pred eeec
Q 044091 146 AFSS 149 (275)
Q Consensus 146 aFSt 149 (275)
..|.
T Consensus 93 Vl~p 96 (131)
T 1wn9_A 93 VVSP 96 (131)
T ss_dssp EECG
T ss_pred ccCH
Confidence 5554
No 179
>2pdo_A Acetyltransferase YPEA; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; HET: MSE; 2.00A {Shigella flexneri 2A}
Probab=20.39 E-value=1.1e+02 Score=22.43 Aligned_cols=32 Identities=13% Similarity=0.031 Sum_probs=25.7
Q ss_pred cchhhhHHHHHHHHHHHHHcCCCeEEEEeeec
Q 044091 118 SGYEAGVKSLKTLVELCCKWGIRVLTVFAFSS 149 (275)
Q Consensus 118 ~Gh~~G~~~l~eiv~wc~~~GI~~lTvYaFSt 149 (275)
.|.--|-.-+..+.+++.+.|++.+.++.++.
T Consensus 82 rg~GiG~~Ll~~~~~~~~~~g~~~i~l~v~~~ 113 (144)
T 2pdo_A 82 RGRGIANALLNRLEKKLIARGCPKIQINVPED 113 (144)
T ss_dssp TTSCHHHHHHHHHHHHHHHTTCCEEEEEEESS
T ss_pred cCCcHHHHHHHHHHHHHHHcCCCEEEEEEeCC
Confidence 34446777788899999999999999988753
No 180
>3d8p_A Acetyltransferase of GNAT family; NP_373092.1, structural GE joint center for structural genomics, JCSG, protein structu initiative; 2.20A {Staphylococcus aureus subsp}
Probab=20.32 E-value=1.1e+02 Score=22.35 Aligned_cols=31 Identities=16% Similarity=0.221 Sum_probs=25.5
Q ss_pred cchhhhHHHHHHHHHHHHHcCCCeEEEEeee
Q 044091 118 SGYEAGVKSLKTLVELCCKWGIRVLTVFAFS 148 (275)
Q Consensus 118 ~Gh~~G~~~l~eiv~wc~~~GI~~lTvYaFS 148 (275)
.|.--|-.-+..+++|+.+.|++.+.+...+
T Consensus 91 rg~Gig~~ll~~~~~~a~~~g~~~i~l~~~~ 121 (163)
T 3d8p_A 91 RNLKIGKKLLDKVIMTCKEQNIDGIYLGTID 121 (163)
T ss_dssp TTTTHHHHHHHHHHHHHHHTTCCEEEEEECT
T ss_pred ccCCHHHHHHHHHHHHHHHCCCeEEEEEecC
Confidence 3444677889999999999999999998764
No 181
>3qb8_A A654L protein; GNAT N-acetyltransferase, acetyltransferase, COA, spermine, spermidine, transferase; HET: COA; 1.50A {Paramecium bursaria chlorella virus 1}
Probab=20.23 E-value=1.2e+02 Score=23.17 Aligned_cols=28 Identities=21% Similarity=0.196 Sum_probs=23.7
Q ss_pred chhhhHHHHHHHHHHHHHcCCCeEEEEe
Q 044091 119 GYEAGVKSLKTLVELCCKWGIRVLTVFA 146 (275)
Q Consensus 119 Gh~~G~~~l~eiv~wc~~~GI~~lTvYa 146 (275)
|.--|-.-+..+++||.+.|++.+.+..
T Consensus 121 g~Gig~~Ll~~~~~~a~~~g~~~i~l~~ 148 (197)
T 3qb8_A 121 GKGLATKLLKKTIEESSSHGFKYIYGDC 148 (197)
T ss_dssp SSSHHHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred CCCHHHHHHHHHHHHHHHcCCCEEEEEc
Confidence 4446778899999999999999999864
No 182
>4h89_A GCN5-related N-acetyltransferase; N-acyltransferase superfamily, structural genomics, PSI-BIOL midwest center for structural genomics, MCSG; 1.37A {Kribbella flavida}
Probab=20.21 E-value=1.3e+02 Score=23.05 Aligned_cols=34 Identities=18% Similarity=0.281 Sum_probs=25.2
Q ss_pred cchhhhHHHHHHHHHHHHHcCCCeEEEEeeecCC
Q 044091 118 SGYEAGVKSLKTLVELCCKWGIRVLTVFAFSSDN 151 (275)
Q Consensus 118 ~Gh~~G~~~l~eiv~wc~~~GI~~lTvYaFSteN 151 (275)
.|.--|-.-+..+++||.+.|++.+.+=.....|
T Consensus 101 rg~GiG~~Ll~~~~~~a~~~g~~~~~l~~~~~~N 134 (173)
T 4h89_A 101 RGRGVGRALCQDMIDWAGREGFRAIQFNAVVETN 134 (173)
T ss_dssp TTSSHHHHHHHHHHHHHHHTTCSEEEEEEEETTC
T ss_pred ccchHHHHHHHHHHHHHHHCCCcEEEEeeecccC
Confidence 3555677889999999999999998763222345
No 183
>2cy2_A TTHA1209, probable acetyltransferase; structural genomics, unknown function, NPPSFA; HET: ACO; 2.00A {Thermus thermophilus} SCOP: d.108.1.1 PDB: 1wk4_A*
Probab=20.21 E-value=1.1e+02 Score=22.28 Aligned_cols=32 Identities=13% Similarity=0.055 Sum_probs=25.9
Q ss_pred cchhhhHHHHHHHHHHHHHcCCCeEEEEeeec
Q 044091 118 SGYEAGVKSLKTLVELCCKWGIRVLTVFAFSS 149 (275)
Q Consensus 118 ~Gh~~G~~~l~eiv~wc~~~GI~~lTvYaFSt 149 (275)
.|.-.|-.-+..+++++.+.|++.+.+...+.
T Consensus 101 rg~Gig~~ll~~~~~~~~~~g~~~i~l~~~~~ 132 (174)
T 2cy2_A 101 QRKGLGRALFHEGARLLQAEGYGRMLVWVLKE 132 (174)
T ss_dssp CSSSHHHHHHHHHHHHHHHTTCCEEEEEEETT
T ss_pred hCcCHHHHHHHHHHHHHHhCCCceEEEEEECC
Confidence 34446778899999999999999999987653
No 184
>2p6v_A Transcription initiation factor TFIID subunit 4; alpha helix; HET: MLY; 2.00A {Homo sapiens} SCOP: a.277.1.1
Probab=20.13 E-value=76 Score=25.09 Aligned_cols=44 Identities=18% Similarity=0.209 Sum_probs=28.8
Q ss_pred CCCHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHhhhhcCCCCCCCCcE
Q 044091 222 YSGQYDLVQACQRIAMKVKDGLIEPNDVSESLIEQELETNCTEFPYPDL 270 (275)
Q Consensus 222 YgGR~EIv~A~r~l~~~v~~g~l~~edI~e~~i~~~L~t~~~~~PdPDL 270 (275)
+..-.|+.+-+|+|+..+.+|++++ |.|...|+....--|.|.|
T Consensus 36 ~~~spev~~~Vr~LVq~Ll~~~i~~-----EeFt~~Lq~~lns~pqP~L 79 (114)
T 2p6v_A 36 GXQSTETAANVXELVQNLLDGXIEA-----EDFTSRLYRELNSSPQPYL 79 (114)
T ss_dssp SSSCHHHHHHHHHHHHHHHTTSSCH-----HHHHHHHHHHTTCCCCTTH
T ss_pred cccChHHHHHHHHHHHHHHHccCCH-----HHHHHHHHHHHcCCCCcch
Confidence 4456789999999999988887655 4555555532112256655
No 185
>2qgq_A Protein TM_1862; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; HET: CXS; 2.00A {Thermotoga maritima MSB8}
Probab=20.12 E-value=3e+02 Score=23.98 Aligned_cols=28 Identities=14% Similarity=0.241 Sum_probs=22.3
Q ss_pred hhHHHHHHHHHHHHHcCCCeEEEEeeec
Q 044091 122 AGVKSLKTLVELCCKWGIRVLTVFAFSS 149 (275)
Q Consensus 122 ~G~~~l~eiv~wc~~~GI~~lTvYaFSt 149 (275)
+..+.+.+.++++.++|+..+++|.||.
T Consensus 168 Et~ed~~~t~~~l~~l~~~~v~~~~~~p 195 (304)
T 2qgq_A 168 ETEEDFEELKQFVEEIQFDKLGAFVYSD 195 (304)
T ss_dssp CCHHHHHHHHHHHHHHCCSEEEEEECCC
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEEEeeC
Confidence 3467788888888888888888888885
No 186
>2b5g_A Diamine acetyltransferase 1; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: ALY; 1.70A {Homo sapiens} SCOP: d.108.1.1 PDB: 2b4d_A* 2jev_A* 2g3t_A 2f5i_A 2b3u_A 2b3v_A* 2b4b_A* 2b58_A* 2fxf_A* 3bj7_A* 3bj8_A*
Probab=20.12 E-value=95 Score=22.98 Aligned_cols=32 Identities=16% Similarity=0.276 Sum_probs=26.4
Q ss_pred cchhhhHHHHHHHHHHHHHcCCCeEEEEeeec
Q 044091 118 SGYEAGVKSLKTLVELCCKWGIRVLTVFAFSS 149 (275)
Q Consensus 118 ~Gh~~G~~~l~eiv~wc~~~GI~~lTvYaFSt 149 (275)
.|.--|-.-+..+++|+.+.|++.+.+..++.
T Consensus 101 rg~Gig~~ll~~~~~~~~~~g~~~i~l~~~~~ 132 (171)
T 2b5g_A 101 RGFGIGSEILKNLSQVAMRCRCSSMHFLVAEW 132 (171)
T ss_dssp CSSSHHHHHHHHHHHHHHHHTCSEEEEEEETT
T ss_pred hCCCHHHHHHHHHHHHHHHCCCCEEEEEEccc
Confidence 34456778899999999999999999988753
No 187
>1nsl_A Probable acetyltransferase; structural genomics, hexamer, alpha-beta, PSI, protein struc initiative, midwest center for structural genomics; 2.70A {Bacillus subtilis} SCOP: d.108.1.1
Probab=20.06 E-value=1.7e+02 Score=21.73 Aligned_cols=33 Identities=9% Similarity=0.074 Sum_probs=25.9
Q ss_pred CcchhhhHHHHHHHHHHHH-HcCCCeEEEEeeec
Q 044091 117 GSGYEAGVKSLKTLVELCC-KWGIRVLTVFAFSS 149 (275)
Q Consensus 117 ~~Gh~~G~~~l~eiv~wc~-~~GI~~lTvYaFSt 149 (275)
..|.--|-+-+..+++|+. +.|++.|.++..+.
T Consensus 105 ~rg~Gig~~ll~~~~~~a~~~~g~~~i~~~~~~~ 138 (184)
T 1nsl_A 105 FEGKGIITAACRKLITYAFEELELNRVAICAAVG 138 (184)
T ss_dssp GTTSSHHHHHHHHHHHHHHHTSCCSEEEEEEETT
T ss_pred hcCCCHHHHHHHHHHHHHHHhcCcEEEEEEEecC
Confidence 3455567788999999995 58999999987653
Done!