Query 044095
Match_columns 308
No_of_seqs 198 out of 767
Neff 5.3
Searched_HMMs 29240
Date Mon Mar 25 19:52:14 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/044095.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/044095hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3tt9_A Plakophilin-2; cell adh 99.7 9.5E-18 3.3E-22 153.2 6.4 168 136-305 7-194 (233)
2 3nmw_A APC variant protein; AR 99.7 3.2E-17 1.1E-21 157.1 8.2 176 116-295 145-337 (354)
3 3nmw_A APC variant protein; AR 99.7 2.2E-16 7.6E-21 151.3 10.4 155 136-292 126-292 (354)
4 3tt9_A Plakophilin-2; cell adh 99.6 6.9E-16 2.4E-20 140.9 10.7 155 136-292 51-229 (233)
5 3nmz_A APC variant protein; pr 99.6 2.7E-16 9.2E-21 155.9 8.3 175 116-294 261-452 (458)
6 1xm9_A Plakophilin 1; armadill 99.6 1.3E-15 4.5E-20 148.5 10.9 153 136-291 43-219 (457)
7 4db6_A Armadillo repeat protei 99.6 2.8E-15 9.4E-20 128.2 11.6 173 117-292 31-209 (210)
8 3l6x_A Catenin delta-1; cateni 99.6 7.9E-16 2.7E-20 157.0 8.7 159 135-295 46-224 (584)
9 3nmz_A APC variant protein; pr 99.6 1.3E-15 4.4E-20 151.0 9.7 174 117-292 219-408 (458)
10 1xm9_A Plakophilin 1; armadill 99.6 1.8E-15 6.1E-20 147.6 9.9 156 138-295 3-175 (457)
11 4db6_A Armadillo repeat protei 99.5 3.3E-14 1.1E-18 121.5 11.9 156 135-293 10-168 (210)
12 4db8_A Armadillo-repeat protei 99.5 3.6E-14 1.2E-18 124.3 10.9 154 136-292 53-209 (252)
13 4db8_A Armadillo-repeat protei 99.5 3.1E-14 1E-18 124.7 8.4 174 116-292 72-251 (252)
14 4hxt_A De novo protein OR329; 99.5 1.1E-13 3.9E-18 119.6 11.7 179 116-297 62-246 (252)
15 3l6x_A Catenin delta-1; cateni 99.5 1.1E-13 3.7E-18 141.2 13.2 156 136-293 89-271 (584)
16 4hxt_A De novo protein OR329; 99.5 1.8E-13 6.1E-18 118.4 11.8 174 116-292 20-199 (252)
17 1xqr_A HSPBP1 protein; armadil 99.4 7.8E-13 2.7E-17 123.9 10.1 174 116-293 58-239 (296)
18 3now_A UNC-45 protein, SD10334 99.4 1E-12 3.5E-17 138.5 11.6 177 116-294 397-612 (810)
19 3ul1_B Importin subunit alpha- 99.3 2.6E-12 9.1E-17 126.5 9.2 157 136-295 99-264 (510)
20 3ul1_B Importin subunit alpha- 99.3 8.9E-12 3.1E-16 122.7 11.9 164 137-301 57-228 (510)
21 3now_A UNC-45 protein, SD10334 99.3 1.7E-11 5.9E-16 129.2 13.9 153 138-294 378-567 (810)
22 1jdh_A Beta-catenin; beta-cate 99.3 7.6E-12 2.6E-16 120.1 9.8 154 136-292 16-172 (529)
23 1jdh_A Beta-catenin; beta-cate 99.3 7.3E-12 2.5E-16 120.2 8.8 158 136-295 58-218 (529)
24 2z6g_A B-catenin; FULL-length, 99.3 1.2E-11 4E-16 128.6 10.3 156 136-295 233-392 (780)
25 3tpo_A Importin subunit alpha- 99.3 4.2E-11 1.4E-15 118.1 13.4 174 117-293 228-407 (529)
26 2z6h_A Catenin beta-1, beta-ca 99.2 2.3E-11 7.9E-16 122.4 10.2 159 136-296 55-216 (644)
27 4b8j_A Importin subunit alpha- 99.2 7E-11 2.4E-15 114.9 13.1 156 136-294 116-275 (528)
28 2z6h_A Catenin beta-1, beta-ca 99.2 3.1E-11 1.1E-15 121.4 10.6 154 136-292 13-169 (644)
29 3tpo_A Importin subunit alpha- 99.2 2E-11 6.9E-16 120.4 8.9 157 136-295 118-283 (529)
30 4b8j_A Importin subunit alpha- 99.2 2.1E-10 7.1E-15 111.6 15.7 175 116-293 221-401 (528)
31 2z6g_A B-catenin; FULL-length, 99.2 5.6E-11 1.9E-15 123.5 10.3 159 136-296 191-352 (780)
32 2jdq_A Importin alpha-1 subuni 99.1 8.7E-10 3E-14 103.3 15.7 176 115-293 167-348 (450)
33 1xqr_A HSPBP1 protein; armadil 99.1 1.6E-10 5.4E-15 108.2 10.6 132 159-293 62-197 (296)
34 2jdq_A Importin alpha-1 subuni 99.1 4.7E-10 1.6E-14 105.1 13.4 154 137-293 64-222 (450)
35 1wa5_B Importin alpha subunit; 99.1 4.7E-10 1.6E-14 109.5 12.7 155 136-293 129-287 (530)
36 1wa5_B Importin alpha subunit; 99.0 2.2E-09 7.6E-14 104.8 14.5 175 116-293 233-413 (530)
37 3opb_A SWI5-dependent HO expre 99.0 4.2E-10 1.4E-14 118.1 8.7 159 136-296 456-639 (778)
38 3opb_A SWI5-dependent HO expre 99.0 5.6E-09 1.9E-13 109.6 14.2 179 115-293 518-729 (778)
39 4gmo_A Putative uncharacterize 98.2 2.4E-06 8.4E-11 87.6 9.3 156 137-293 34-215 (684)
40 3grl_A General vesicular trans 97.7 3.4E-05 1.1E-09 79.7 6.6 118 135-252 120-244 (651)
41 3grl_A General vesicular trans 97.6 0.00024 8.2E-09 73.4 11.0 156 137-293 60-242 (651)
42 3ltm_A Alpha-REP4; protein eng 97.6 0.00069 2.4E-08 57.5 11.8 150 115-295 36-206 (211)
43 3ltj_A Alpharep-4; protein eng 97.5 0.0013 4.5E-08 55.3 12.4 104 115-247 31-134 (201)
44 3ltm_A Alpha-REP4; protein eng 97.4 0.0014 4.9E-08 55.5 11.5 92 135-247 17-108 (211)
45 3ltj_A Alpharep-4; protein eng 97.3 0.0031 1.1E-07 52.9 12.5 123 136-291 75-197 (201)
46 1te4_A Conserved protein MTH18 96.6 0.0013 4.3E-08 52.7 3.2 120 135-288 10-129 (131)
47 1oyz_A Hypothetical protein YI 96.3 0.025 8.4E-07 49.9 10.5 93 137-248 128-220 (280)
48 4gmo_A Putative uncharacterize 96.2 0.0078 2.7E-07 61.6 7.7 99 171-270 27-128 (684)
49 2qk2_A LP04448P; mini spindles 95.9 0.033 1.1E-06 48.5 9.2 108 178-294 98-207 (242)
50 1oyz_A Hypothetical protein YI 95.9 0.022 7.6E-07 50.2 7.9 62 136-207 22-83 (280)
51 1te4_A Conserved protein MTH18 95.7 0.0094 3.2E-07 47.5 4.5 88 138-246 43-130 (131)
52 3dad_A FH1/FH2 domain-containi 95.5 0.093 3.2E-06 50.3 11.2 135 158-292 136-286 (339)
53 4fdd_A Transportin-1; heat rep 95.5 0.011 3.9E-07 60.6 5.2 150 137-290 359-510 (852)
54 1b3u_A Protein (protein phosph 94.6 0.1 3.6E-06 49.8 8.8 112 176-294 201-312 (588)
55 1b3u_A Protein (protein phosph 94.2 0.12 4.1E-06 49.3 8.2 108 178-292 164-271 (588)
56 2qk1_A Protein STU2; STU2P, XM 93.6 0.093 3.2E-06 47.0 5.8 114 179-295 105-223 (249)
57 2vgl_B AP-2 complex subunit be 93.6 0.063 2.2E-06 53.5 5.1 71 179-252 122-192 (591)
58 4fdd_A Transportin-1; heat rep 93.1 0.12 4.2E-06 53.0 6.4 173 116-292 108-285 (852)
59 2qk2_A LP04448P; mini spindles 92.9 0.47 1.6E-05 41.0 9.0 102 180-291 58-161 (242)
60 3dad_A FH1/FH2 domain-containi 92.2 1 3.5E-05 43.1 11.0 112 180-295 120-234 (339)
61 1ibr_B P95, importin beta-1 su 91.9 0.63 2.2E-05 42.8 9.0 157 134-293 125-289 (462)
62 1qgr_A Protein (importin beta 91.7 0.59 2E-05 47.1 9.3 111 178-293 366-480 (876)
63 1ibr_B P95, importin beta-1 su 90.8 0.85 2.9E-05 41.9 8.7 112 178-295 321-440 (462)
64 2bpt_A Importin beta-1 subunit 90.4 0.9 3.1E-05 45.6 9.1 113 178-294 411-531 (861)
65 1u6g_C TIP120 protein, CAND1; 88.1 0.72 2.4E-05 49.3 6.8 151 137-294 48-206 (1230)
66 2f31_A Diaphanous protein homo 87.6 1.1 3.7E-05 39.9 6.6 76 177-252 42-128 (233)
67 2qk1_A Protein STU2; STU2P, XM 87.1 1.8 6.1E-05 38.5 7.8 111 180-294 62-177 (249)
68 1qgr_A Protein (importin beta 86.4 1.1 3.8E-05 45.0 6.7 70 177-250 407-480 (876)
69 3eg5_B Protein diaphanous homo 85.4 2.9 0.0001 40.0 8.8 76 177-252 108-194 (383)
70 2vgl_B AP-2 complex subunit be 84.8 0.76 2.6E-05 45.6 4.6 169 116-292 139-311 (591)
71 3b2a_A TON_1937, putative unch 84.3 3.3 0.00011 38.3 8.1 72 178-249 33-104 (265)
72 1w63_A Adapter-related protein 82.6 5.6 0.00019 39.7 9.8 103 137-250 313-415 (618)
73 2vgl_A Adaptor protein complex 82.3 1.6 5.4E-05 44.1 5.7 89 158-252 129-219 (621)
74 2bnx_A Diaphanous protein homo 79.4 4.1 0.00014 39.0 7.3 76 177-252 46-132 (386)
75 1u6g_C TIP120 protein, CAND1; 79.2 1.4 4.9E-05 47.0 4.4 110 179-294 176-286 (1230)
76 2bpt_A Importin beta-1 subunit 77.3 7 0.00024 39.1 8.5 110 180-292 599-711 (861)
77 1w63_A Adapter-related protein 71.4 26 0.0009 34.8 11.0 69 178-251 313-381 (618)
78 4ffb_C Protein STU2; tubulin f 71.1 8.4 0.00029 34.0 6.6 116 172-295 96-215 (278)
79 2vgl_A Adaptor protein complex 69.9 26 0.00087 35.2 10.6 100 180-291 113-215 (621)
80 3b2a_A TON_1937, putative unch 69.3 45 0.0015 30.7 11.0 143 137-294 33-181 (265)
81 1ho8_A Vacuolar ATP synthase s 67.3 19 0.00066 35.8 8.9 136 159-295 190-353 (480)
82 4ffb_C Protein STU2; tubulin f 63.7 33 0.0011 30.0 9.0 71 180-250 57-133 (278)
83 1jer_A Cucumber stellacyanin; 63.3 1.3 4.5E-05 37.0 -0.4 14 13-26 85-98 (138)
84 1vdy_A Hypothetical protein (R 60.7 14 0.00046 30.9 5.4 74 221-295 50-133 (140)
85 3ebb_A Phospholipase A2-activa 57.6 1.2E+02 0.004 28.0 14.0 112 137-250 103-221 (304)
86 2fv2_A RCD1 required for cell 56.3 38 0.0013 31.3 8.1 93 159-252 78-177 (268)
87 3ebb_A Phospholipase A2-activa 55.6 9.9 0.00034 35.3 4.2 123 163-290 174-304 (304)
88 2fv2_A RCD1 required for cell 55.2 1E+02 0.0035 28.4 10.8 126 160-290 125-266 (268)
89 4ady_A RPN2, 26S proteasome re 52.6 1E+02 0.0035 33.2 11.8 63 180-251 579-643 (963)
90 3u0r_A Apoptosis inhibitor 5; 48.8 96 0.0033 31.1 10.2 93 179-287 66-158 (507)
91 2iw3_A Elongation factor 3A; a 48.5 1.8E+02 0.0063 31.3 13.0 130 160-297 75-209 (986)
92 2iw3_A Elongation factor 3A; a 47.5 44 0.0015 36.1 8.1 129 159-296 197-328 (986)
93 1juq_A ADP-ribosylation factor 46.0 45 0.0015 28.2 6.5 70 179-249 51-128 (171)
94 3ldz_A STAM-1, signal transduc 45.3 51 0.0018 26.8 6.6 68 180-248 44-113 (140)
95 1x5b_A Signal transducing adap 44.5 93 0.0032 26.0 8.2 75 221-296 53-129 (163)
96 2of3_A ZYG-9; multifunctional 44.3 75 0.0026 28.9 8.1 64 179-249 133-196 (266)
97 1x5b_A Signal transducing adap 41.0 56 0.0019 27.4 6.3 69 179-248 53-124 (163)
98 3zyq_A Hepatocyte growth facto 39.4 67 0.0023 28.2 6.8 95 196-297 27-123 (226)
99 3zyq_A Hepatocyte growth facto 39.0 49 0.0017 29.1 5.8 70 179-249 46-118 (226)
100 1juq_A ADP-ribosylation factor 37.4 52 0.0018 27.8 5.5 75 221-295 51-131 (171)
101 3g2s_A C-terminal fragment of 37.0 74 0.0025 26.4 6.3 70 179-249 49-126 (149)
102 1mhq_A ADP-ribosylation factor 36.7 63 0.0022 26.7 5.8 71 178-249 38-116 (148)
103 1dvp_A HRS, hepatocyte growth 36.5 1E+02 0.0036 26.6 7.5 74 221-295 43-118 (220)
104 3ldz_A STAM-1, signal transduc 36.0 1E+02 0.0034 25.0 6.9 92 197-296 25-118 (140)
105 4ady_A RPN2, 26S proteasome re 36.0 2.2E+02 0.0076 30.7 11.2 32 221-252 578-610 (963)
106 3g2s_A C-terminal fragment of 35.1 70 0.0024 26.5 5.9 76 221-296 49-130 (149)
107 1dvp_A HRS, hepatocyte growth 33.2 63 0.0022 28.0 5.6 69 179-248 43-114 (220)
108 3u0r_A Apoptosis inhibitor 5; 33.1 57 0.0019 32.7 5.7 48 137-190 65-112 (507)
109 2knp_A Mcocc-1; disulfide-rich 31.6 11 0.00038 23.6 0.2 19 17-35 6-25 (33)
110 1mhq_A ADP-ribosylation factor 28.8 73 0.0025 26.3 4.9 76 221-296 39-120 (148)
111 3tjz_B Coatomer subunit gamma; 27.4 3.6E+02 0.012 25.2 10.1 68 180-252 141-208 (355)
112 2of3_A ZYG-9; multifunctional 26.5 56 0.0019 29.8 4.1 64 187-255 176-242 (266)
113 4f52_E Glomulin; cullin-ring E 26.4 88 0.003 31.7 5.9 63 170-251 34-99 (596)
114 3tjz_B Coatomer subunit gamma; 25.4 4.2E+02 0.014 24.8 10.9 69 179-254 105-173 (355)
115 1ho8_A Vacuolar ATP synthase s 23.0 1.9E+02 0.0064 28.7 7.4 68 179-247 396-474 (480)
116 2h5n_A Hypothetical protein PG 22.6 2.9E+02 0.0099 21.9 9.2 85 167-253 11-100 (133)
117 2x19_B Importin-13; nuclear tr 20.3 3.4E+02 0.012 27.6 9.0 68 180-252 488-559 (963)
118 2x19_B Importin-13; nuclear tr 20.0 3.2E+02 0.011 27.8 8.7 111 177-291 528-645 (963)
No 1
>3tt9_A Plakophilin-2; cell adhesion; 1.55A {Homo sapiens}
Probab=99.70 E-value=9.5e-18 Score=153.18 Aligned_cols=168 Identities=12% Similarity=0.079 Sum_probs=134.1
Q ss_pred cchHHHHHHHhCCCCC--CCCCcHHHHHHHhcC-CCCcHHHHHHhCcHHHHHHHHhccChhHHHHHHHHHHHHhc-Chhh
Q 044095 136 LAALYLLERSLLPNPP--SDQACQPELMRALCL-AESNRRVAVEAGAVGAVIEVVAELDAAAGERALAALELMCT-VAEG 211 (308)
Q Consensus 136 ~~AI~lLV~LL~~g~~--~~k~~a~a~l~aL~~-~~~Nr~~iV~aGAVp~LVeLL~~~s~~~~E~ALAiL~~La~-~~eG 211 (308)
.-.|+.||++|..+.. ..+..+...+.+||. .++||..|+++|+||.||++|.+.+.+..+.|+.+|.+|+. ++++
T Consensus 7 ~~~i~~lV~lL~s~~~~~~~q~~Aa~~l~~L~~~~~~~r~~I~~~G~Ip~LV~lL~s~~~~vq~~Aa~aL~nLa~~~~~n 86 (233)
T 3tt9_A 7 EMTLERAVSMLEADHMLPSRISAAATFIQHECFQKSEARKRVNQLRGILKLLQLLKVQNEDVQRAVCGALRNLVFEDNDN 86 (233)
T ss_dssp CCCHHHHHHTCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHTTHHHHHHHGGGCCCHHHHHHHHHHHHHHHTTCHHH
T ss_pred hccHHHHHHHhCCCCchHHHHHHHHHHHHHHHcCCcHHHHHHHHcCCHHHHHHHHcCCCHHHHHHHHHHHHHHHhCCHHH
Confidence 4579999999998765 333344567788994 57899999999999999999999899999999999999998 5899
Q ss_pred HHHHHhccCcHHHHHHHhcC-CCHHHHHHHHHHHHHHhcCCcchhhccCCccHHHHHHHHH---hCC-----------CC
Q 044095 212 AEETRAHALAVPVMVTMMGQ-MAGRGKEYAISVLAVIYGGGDQLVVAAPPEEVARAVELAL---QGN-----------CT 276 (308)
Q Consensus 212 r~aI~~~~gaIp~LV~lLr~-gS~~~KE~AVa~L~sLC~~~~~~v~~a~~~gv~~Ll~Lll---qg~-----------cS 276 (308)
|.+|.+ .|+|+.||++|++ ++...+|+|+++||+|+..+..+.. +..+|++.|+.++. .|- .+
T Consensus 87 k~~I~~-~GaI~~Lv~lL~~~~~~~~~e~a~~aL~nLS~~~~~k~~-i~~~~i~~Lv~ll~~p~sG~~~~~~~~~~~~~~ 164 (233)
T 3tt9_A 87 KLEVAE-LNGVPRLLQVLKQTRDLETKKQITGLLWNLSSNDKLKNL-MITEALLTLTENIIIPFSGWPEGDYPKANGLLD 164 (233)
T ss_dssp HHHHHH-TTHHHHHHHHHHHCCCHHHHHHHHHHHHHHHTSGGGHHH-HHHHHHHHHCCCCCHHHHCCCGGGCCCCCTTCC
T ss_pred HHHHHH-cCCHHHHHHHHccCCCHHHHHHHHHHHHHHHcChhhHHH-HHhccHHHHHHHHhccccCCcccccccccccch
Confidence 999998 7899999999984 7899999999999999988766653 44567777765442 231 14
Q ss_pred HHHHHHHHHHHHHHHhcC-CCCCccccccC
Q 044095 277 PRGRRKGTQLLKSLKEYG-QPDTTQDEMNG 305 (308)
Q Consensus 277 ~raKrKA~~LLklL~~~~-e~~~~~~~~~g 305 (308)
...+++|...|+.|.... +++-.+.+..|
T Consensus 165 ~~v~~na~~~L~nLss~~~~~R~~~r~~~G 194 (233)
T 3tt9_A 165 FDIFYNVTGCLRNMSSAGADGRKAMRRCDG 194 (233)
T ss_dssp HHHHHHHHHHHHHHTTSCHHHHHHHHTSTT
T ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHCCC
Confidence 589999999999998754 44444444333
No 2
>3nmw_A APC variant protein; ARMADIILO repeats domain, cell adhesion-cell cycle complex; 1.60A {Homo sapiens} PDB: 3nmx_A 3t7u_A 3au3_A 3qhe_A
Probab=99.68 E-value=3.2e-17 Score=157.14 Aligned_cols=176 Identities=11% Similarity=-0.018 Sum_probs=135.7
Q ss_pred hHHHHHHHHhHhccC-----CCCcccchHHHHHHHhC-CCCCCCCCcHHHHHHHhcC-CCCcHHHHH-HhCcHHHHHHHH
Q 044095 116 LQELFHLAELQLSSG-----SDSDRLAALYLLERSLL-PNPPSDQACQPELMRALCL-AESNRRVAV-EAGAVGAVIEVV 187 (308)
Q Consensus 116 ~~~~f~l~~l~lss~-----~i~~~~~AI~lLV~LL~-~g~~~~k~~a~a~l~aL~~-~~~Nr~~iV-~aGAVp~LVeLL 187 (308)
.++.++|..|...+. .+. ..++|+.||++|. .+....+..+..++++|+. +++||..|+ .+|+|+.|+++|
T Consensus 145 ~~A~~aL~nLs~~~~~~~k~~i~-~~G~Ip~Lv~lL~~~~~~~~~~~A~~aL~nLs~~~~~nk~~i~~~~Gai~~Lv~lL 223 (354)
T 3nmw_A 145 QVIASVLRNLSWRADVNSKKTLR-EVGSVKALMECALEVKKESTLKSVLSALWNLSAHCTENKADICAVDGALAFLVGTL 223 (354)
T ss_dssp HHHHHHHHHHHTTCCHHHHHHHH-HTTHHHHHHHHHHHCCCHHHHHHHHHHHHHHHTTCHHHHHHHHHSTTHHHHHHHHT
T ss_pred HHHHHHHHHHhccCCHHHHHHHH-HCCCHHHHHHHHhcCCCHHHHHHHHHHHHHHHccChhhhHHHHHhcCcHHHHHHHh
Confidence 345566666654311 122 2589999999864 4433233223468889998 678999999 799999999999
Q ss_pred hccCh----hHHHHHHHHHHHHhc----ChhhHHHHHhccCcHHHHHHHhcCCCHHHHHHHHHHHHHHhcCCcchhhccC
Q 044095 188 AELDA----AAGERALAALELMCT----VAEGAEETRAHALAVPVMVTMMGQMAGRGKEYAISVLAVIYGGGDQLVVAAP 259 (308)
Q Consensus 188 ~~~s~----~~~E~ALAiL~~La~----~~eGr~aI~~~~gaIp~LV~lLr~gS~~~KE~AVa~L~sLC~~~~~~v~~a~ 259 (308)
...+. +.++.|+.+|.+|+. ++++|.+|.+ .|+|+.||++|++++.+.+++|+.+|++|+..+.+....+.
T Consensus 224 ~~~~~~~~~~v~~~A~~aL~nLs~~~a~~~~~~~~i~~-~g~i~~Lv~lL~~~~~~v~~~A~~aL~nLa~~~~~~~~~i~ 302 (354)
T 3nmw_A 224 TYRSQTNTLAIIESGGGILRNVSSLIATNEDHRQILRE-NNCLQTLLQHLKSHSLTIVSNACGTLWNLSARNPKDQEALW 302 (354)
T ss_dssp TCCCSSSCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHT-TTHHHHHHHHTTCSCHHHHHHHHHHHHHHTSSCHHHHHHHH
T ss_pred ccCCCcccHHHHHHHHHHHHHHHhhccCCHHHHHHHHH-cCCHHHHHHHHcCCChHHHHHHHHHHHHHhCCCHHHHHHHH
Confidence 86543 489999999999995 8999999988 78999999999999999999999999999976654444455
Q ss_pred Ccc-HHHHHHHHHhCCCCHHHHHHHHHHHHHHHhcCC
Q 044095 260 PEE-VARAVELALQGNCTPRGRRKGTQLLKSLKEYGQ 295 (308)
Q Consensus 260 ~~g-v~~Ll~Lllqg~cS~raKrKA~~LLklL~~~~e 295 (308)
+.| ++.|+.|+..+ +.+.|+.|...|+.|.....
T Consensus 303 ~~G~i~~Lv~LL~s~--~~~i~~~A~~aL~nL~~~~~ 337 (354)
T 3nmw_A 303 DMGAVSMLKNLIHSK--HKMIAMGSAAALRNLMANRP 337 (354)
T ss_dssp HTTHHHHHHTTTTCS--SHHHHHHHHHHHHHHHTTCC
T ss_pred HCCCHHHHHHHHhCC--CHHHHHHHHHHHHHHHcCCH
Confidence 555 67787766556 89999999999998887644
No 3
>3nmw_A APC variant protein; ARMADIILO repeats domain, cell adhesion-cell cycle complex; 1.60A {Homo sapiens} PDB: 3nmx_A 3t7u_A 3au3_A 3qhe_A
Probab=99.66 E-value=2.2e-16 Score=151.27 Aligned_cols=155 Identities=14% Similarity=0.078 Sum_probs=126.5
Q ss_pred cchHHHHHHHhCCCCCCCCCcHHHHHHHhcCC--CCcHHHHHHhCcHHHHHHHH-hccChhHHHHHHHHHHHHhc-Chhh
Q 044095 136 LAALYLLERSLLPNPPSDQACQPELMRALCLA--ESNRRVAVEAGAVGAVIEVV-AELDAAAGERALAALELMCT-VAEG 211 (308)
Q Consensus 136 ~~AI~lLV~LL~~g~~~~k~~a~a~l~aL~~~--~~Nr~~iV~aGAVp~LVeLL-~~~s~~~~E~ALAiL~~La~-~~eG 211 (308)
.++|+.||+||+.+....+..+..++++|+.. ++||..|+++|+|+.||++| ...+.+..+.|+.+|.+|+. ++++
T Consensus 126 ~GaIp~LV~LL~s~~~~v~~~A~~aL~nLs~~~~~~~k~~i~~~G~Ip~Lv~lL~~~~~~~~~~~A~~aL~nLs~~~~~n 205 (354)
T 3nmw_A 126 KGCMRALVAQLKSESEDLQQVIASVLRNLSWRADVNSKKTLREVGSVKALMECALEVKKESTLKSVLSALWNLSAHCTEN 205 (354)
T ss_dssp HHHHHHHHHGGGCSCHHHHHHHHHHHHHHHTTCCHHHHHHHHHTTHHHHHHHHHHHCCCHHHHHHHHHHHHHHHTTCHHH
T ss_pred CCcHHHHHHHHCCCCHHHHHHHHHHHHHHhccCCHHHHHHHHHCCCHHHHHHHHhcCCCHHHHHHHHHHHHHHHccChhh
Confidence 46799999999977644444455788899874 57999999999999999986 55678899999999999999 7899
Q ss_pred HHHHHhccCcHHHHHHHhcCCCH----HHHHHHHHHHHHHhc---CCcchhhccCCcc-HHHHHHHHHhCCCCHHHHHHH
Q 044095 212 AEETRAHALAVPVMVTMMGQMAG----RGKEYAISVLAVIYG---GGDQLVVAAPPEE-VARAVELALQGNCTPRGRRKG 283 (308)
Q Consensus 212 r~aI~~~~gaIp~LV~lLr~gS~----~~KE~AVa~L~sLC~---~~~~~v~~a~~~g-v~~Ll~Lllqg~cS~raKrKA 283 (308)
|..|....|+|+.||++|+.+++ .-+|+|+.+|++|+. .+.+.+..+...| ++.|+.++..+ +...++.|
T Consensus 206 k~~i~~~~Gai~~Lv~lL~~~~~~~~~~v~~~A~~aL~nLs~~~a~~~~~~~~i~~~g~i~~Lv~lL~~~--~~~v~~~A 283 (354)
T 3nmw_A 206 KADICAVDGALAFLVGTLTYRSQTNTLAIIESGGGILRNVSSLIATNEDHRQILRENNCLQTLLQHLKSH--SLTIVSNA 283 (354)
T ss_dssp HHHHHHSTTHHHHHHHHTTCCCSSSCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHTTTHHHHHHHHTTCS--CHHHHHHH
T ss_pred hHHHHHhcCcHHHHHHHhccCCCcccHHHHHHHHHHHHHHHhhccCCHHHHHHHHHcCCHHHHHHHHcCC--ChHHHHHH
Confidence 99998668999999999998765 479999999999996 3444333444444 67888777766 89999999
Q ss_pred HHHHHHHHh
Q 044095 284 TQLLKSLKE 292 (308)
Q Consensus 284 ~~LLklL~~ 292 (308)
...|..|..
T Consensus 284 ~~aL~nLa~ 292 (354)
T 3nmw_A 284 CGTLWNLSA 292 (354)
T ss_dssp HHHHHHHTS
T ss_pred HHHHHHHhC
Confidence 999998873
No 4
>3tt9_A Plakophilin-2; cell adhesion; 1.55A {Homo sapiens}
Probab=99.64 E-value=6.9e-16 Score=140.88 Aligned_cols=155 Identities=12% Similarity=0.015 Sum_probs=125.9
Q ss_pred cchHHHHHHHhCCCCCCCCCcHHHHHHHhcC-CCCcHHHHHHhCcHHHHHHHHh-ccChhHHHHHHHHHHHHhcChhhHH
Q 044095 136 LAALYLLERSLLPNPPSDQACQPELMRALCL-AESNRRVAVEAGAVGAVIEVVA-ELDAAAGERALAALELMCTVAEGAE 213 (308)
Q Consensus 136 ~~AI~lLV~LL~~g~~~~k~~a~a~l~aL~~-~~~Nr~~iV~aGAVp~LVeLL~-~~s~~~~E~ALAiL~~La~~~eGr~ 213 (308)
.|+|+.||++|+.++...+..+..++++|+. +++||..|+++|+|+.||++|. ..+.+..|.|+.+|.+|+.++++|.
T Consensus 51 ~G~Ip~LV~lL~s~~~~vq~~Aa~aL~nLa~~~~~nk~~I~~~GaI~~Lv~lL~~~~~~~~~e~a~~aL~nLS~~~~~k~ 130 (233)
T 3tt9_A 51 LRGILKLLQLLKVQNEDVQRAVCGALRNLVFEDNDNKLEVAELNGVPRLLQVLKQTRDLETKKQITGLLWNLSSNDKLKN 130 (233)
T ss_dssp TTHHHHHHHGGGCCCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHHHCCCHHHHHHHHHHHHHHHTSGGGHH
T ss_pred cCCHHHHHHHHcCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHcCCHHHHHHHHccCCCHHHHHHHHHHHHHHHcChhhHH
Confidence 4899999999998765555445678889997 5789999999999999999998 4688999999999999999999999
Q ss_pred HHHhccCcHHHHHHHhc---CC-------------CHHHHHHHHHHHHHHhcCCcc-hhhccCCcc-HHHHHHHHHh---
Q 044095 214 ETRAHALAVPVMVTMMG---QM-------------AGRGKEYAISVLAVIYGGGDQ-LVVAAPPEE-VARAVELALQ--- 272 (308)
Q Consensus 214 aI~~~~gaIp~LV~lLr---~g-------------S~~~KE~AVa~L~sLC~~~~~-~v~~a~~~g-v~~Ll~Lllq--- 272 (308)
.|.+ ++|+.||++|. .| ....+++|+++|.+|+..+.+ +..+...+| |..|+.++..
T Consensus 131 ~i~~--~~i~~Lv~ll~~p~sG~~~~~~~~~~~~~~~~v~~na~~~L~nLss~~~~~R~~~r~~~Gli~~Lv~~l~~~~~ 208 (233)
T 3tt9_A 131 LMIT--EALLTLTENIIIPFSGWPEGDYPKANGLLDFDIFYNVTGCLRNMSSAGADGRKAMRRCDGLIDSLVHYVRGTIA 208 (233)
T ss_dssp HHHH--HHHHHHCCCCCHHHHCCCGGGCCCCCTTCCHHHHHHHHHHHHHHTTSCHHHHHHHHTSTTHHHHHHHHHHHHHH
T ss_pred HHHh--ccHHHHHHHHhccccCCcccccccccccchHHHHHHHHHHHHHHhcCCHHHHHHHHHCCCcHHHHHHHHHhhhh
Confidence 9987 37999999764 12 348899999999999987633 332333455 6788776654
Q ss_pred -CCCCHHHHHHHHHHHHHHHh
Q 044095 273 -GNCTPRGRRKGTQLLKSLKE 292 (308)
Q Consensus 273 -g~cS~raKrKA~~LLklL~~ 292 (308)
++.+.+.+|.|...|+.|..
T Consensus 209 ~~~~~~k~~En~v~~L~nLs~ 229 (233)
T 3tt9_A 209 DYQPDDKATENCVCILHNLSY 229 (233)
T ss_dssp TTCTTCHHHHHHHHHHHHHCC
T ss_pred cccchhHHHHHHHHHHHHHHh
Confidence 44577899999999998864
No 5
>3nmz_A APC variant protein; protein-protein complex, armadillo repeats, cell adhesion-CE complex; 3.01A {Homo sapiens}
Probab=99.63 E-value=2.7e-16 Score=155.93 Aligned_cols=175 Identities=11% Similarity=-0.011 Sum_probs=134.4
Q ss_pred hHHHHHHHHhHhccC-----CCCcccchHHHHHHHhCC-CCCCCCCcHHHHHHHhcC-CCCcHHHHH-HhCcHHHHHHHH
Q 044095 116 LQELFHLAELQLSSG-----SDSDRLAALYLLERSLLP-NPPSDQACQPELMRALCL-AESNRRVAV-EAGAVGAVIEVV 187 (308)
Q Consensus 116 ~~~~f~l~~l~lss~-----~i~~~~~AI~lLV~LL~~-g~~~~k~~a~a~l~aL~~-~~~Nr~~iV-~aGAVp~LVeLL 187 (308)
.++.++|..|...+. .+.+ .++|+.||++|.. +....+..+..++++|+. +++||..|+ .+|+|+.|+++|
T Consensus 261 ~~A~~aL~nLs~~~~~~~k~~I~~-~GaI~~LV~lLl~s~~~~v~~~A~~aL~nLs~~~~~nk~~I~~~~Gal~~Lv~LL 339 (458)
T 3nmz_A 261 QVIASVLRNLSWRADVNSKKTLRE-VGSVKALMECALEVKKESTLKSVLSALWNLSAHCTENKADICAVDGALAFLVGTL 339 (458)
T ss_dssp HHHHHHHHHHTSSCCHHHHHHHHH-TTHHHHHHHHHTTCCSHHHHHHHHHHHHHHHHHCHHHHHHHHHSTTHHHHHHHHT
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHH-cCCHHHHHHHHhcCCCHHHHHHHHHHHHHHccCCHHHHHHHHHhcCcHHHHHHHh
Confidence 345556665544211 1222 4899999998654 332233223468889998 779999999 799999999999
Q ss_pred hccCh----hHHHHHHHHHHHHhc----ChhhHHHHHhccCcHHHHHHHhcCCCHHHHHHHHHHHHHHhcCCcchhhccC
Q 044095 188 AELDA----AAGERALAALELMCT----VAEGAEETRAHALAVPVMVTMMGQMAGRGKEYAISVLAVIYGGGDQLVVAAP 259 (308)
Q Consensus 188 ~~~s~----~~~E~ALAiL~~La~----~~eGr~aI~~~~gaIp~LV~lLr~gS~~~KE~AVa~L~sLC~~~~~~v~~a~ 259 (308)
...+. +.++.|+.+|.+|+. +++++.+|.+ .|+|+.||++|+.++...+++|+.+|++|+..+.+....++
T Consensus 340 ~~~~~~~~~~v~~~A~~aL~nLs~~~a~~~~~~~~i~~-~G~i~~Lv~LL~~~~~~v~~~A~~aL~nLa~~~~~~~~~i~ 418 (458)
T 3nmz_A 340 TYRSQTNTLAIIESGGGILRNVSSLIATNEDHRQILRE-NNCLQTLLQHLKSHSLTIVSNACGTLWNLSARNPKDQEALW 418 (458)
T ss_dssp TCCCSSSTTHHHHHHHHHHHHHHHHHTTCHHHHHHHHH-TTHHHHHHHHSSCSCHHHHHHHHHHHHHHHSSCHHHHHHHH
T ss_pred cCCCCcchHHHHHHHHHHHHHHHhcccCCHHHHHHHHH-cccHHHHHHHHcCCChHHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 86543 489999999999995 8999999988 68999999999999999999999999999976654444455
Q ss_pred Ccc-HHHHHHHHHhCCCCHHHHHHHHHHHHHHHhcC
Q 044095 260 PEE-VARAVELALQGNCTPRGRRKGTQLLKSLKEYG 294 (308)
Q Consensus 260 ~~g-v~~Ll~Lllqg~cS~raKrKA~~LLklL~~~~ 294 (308)
+.| ++.|+.++..+ +.+.|+.|...|+.|....
T Consensus 419 ~~G~I~~Lv~LL~s~--~~~v~~~Aa~AL~nL~~~~ 452 (458)
T 3nmz_A 419 DMGAVSMLKNLIHSK--HKMIAMGSAAALRNLMANR 452 (458)
T ss_dssp HHTHHHHHHTTTTCS--SHHHHHHHHHHHHHHHTCC
T ss_pred HCCCHHHHHHHHhCC--CHHHHHHHHHHHHHHHcCC
Confidence 555 67777766555 8999999999998887654
No 6
>1xm9_A Plakophilin 1; armadillo repeat, cell adhesion; 2.80A {Homo sapiens} SCOP: a.118.1.24
Probab=99.61 E-value=1.3e-15 Score=148.55 Aligned_cols=153 Identities=15% Similarity=0.148 Sum_probs=119.2
Q ss_pred cchHHHHHHHhCCCCCCCCCcHHHHHHHhcCC-CCcHHHHHHhCcHHHHHHHHh-ccChhHHHHHHHHHHHHhcChhhHH
Q 044095 136 LAALYLLERSLLPNPPSDQACQPELMRALCLA-ESNRRVAVEAGAVGAVIEVVA-ELDAAAGERALAALELMCTVAEGAE 213 (308)
Q Consensus 136 ~~AI~lLV~LL~~g~~~~k~~a~a~l~aL~~~-~~Nr~~iV~aGAVp~LVeLL~-~~s~~~~E~ALAiL~~La~~~eGr~ 213 (308)
.|+|+.||++|+.++...+..+..++++|+.. ++||..|+++|+|+.||++|. +++.+..+.|+.+|.+|+.++++|.
T Consensus 43 ~g~i~~Lv~lL~s~~~~~~~~A~~aL~nLa~~~~~~k~~i~~~G~i~~Lv~lL~~~~~~~~~~~a~~aL~nLa~~~~~~~ 122 (457)
T 1xm9_A 43 LGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLETRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDELKE 122 (457)
T ss_dssp TTHHHHHHHHTTSSCHHHHHHHHHHHHHHHSSCHHHHHHHHHTTCHHHHHHHHTTCCCHHHHHHHHHHHHHHHTSSSTHH
T ss_pred cCCHHHHHHHHcCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHcCCHHHHHHHHhhCCCHHHHHHHHHHHHHHhcCHHhHH
Confidence 58999999999977644444455788899976 899999999999999999998 7789999999999999999999999
Q ss_pred HHHhccCcHHHHHHHh--------cCCCHHHHH--------HHHHHHHHHhcCCcchhhccCCc-c-HHHHHHHHHh---
Q 044095 214 ETRAHALAVPVMVTMM--------GQMAGRGKE--------YAISVLAVIYGGGDQLVVAAPPE-E-VARAVELALQ--- 272 (308)
Q Consensus 214 aI~~~~gaIp~LV~lL--------r~gS~~~KE--------~AVa~L~sLC~~~~~~v~~a~~~-g-v~~Ll~Lllq--- 272 (308)
.|.+ |+|+.||++| +..+.+.+| +|+.+|++||.+ .+.+..+... | +..|+.++..
T Consensus 123 ~i~~--g~i~~Lv~ll~~~~s~~~~~~~~~~~e~~~~~v~~~a~~aL~nLs~~-~~~~~~i~~~~g~i~~Lv~lL~~~~~ 199 (457)
T 1xm9_A 123 ELIA--DALPVLADRVIIPFSGWCDGNSNMSREVVDPEVFFNATGCLRNLSSA-DAGRQTMRNYSGLIDSLMAYVQNCVA 199 (457)
T ss_dssp HHHH--HHHHHHHHHTTHHHHTCC---------CCCHHHHHHHHHHHHHHTTS-HHHHHHHTTSTTHHHHHHHHHHHHHH
T ss_pred HHHh--ccHHHHHHHHhccccccccCccchhcccccHHHHHHHHHHHHHHccC-HHHHHHHHHcCCCHHHHHHHHHhhcc
Confidence 9987 8999999999 334556666 999999999987 4333344442 5 6777766664
Q ss_pred -CCCCHHHHHHHHHHHHHHH
Q 044095 273 -GNCTPRGRRKGTQLLKSLK 291 (308)
Q Consensus 273 -g~cS~raKrKA~~LLklL~ 291 (308)
++...+.+++|..+|+.|.
T Consensus 200 ~~~~~~~~~e~a~~~L~nLs 219 (457)
T 1xm9_A 200 ASRCDDKSVENCMCVLHNLS 219 (457)
T ss_dssp HTCTTCTTHHHHHHHHHHHT
T ss_pred ccCCchHHHHHHHHHHHhcc
Confidence 2345678899998888875
No 7
>4db6_A Armadillo repeat protein; solenoid repeat, armadillo repeat motif, de novo protein; 1.80A {Synthetic construct} PDB: 4db9_A 4dba_A
Probab=99.61 E-value=2.8e-15 Score=128.23 Aligned_cols=173 Identities=16% Similarity=0.163 Sum_probs=133.1
Q ss_pred HHHHHHHHhHhccCC-CC--cccchHHHHHHHhCCCCCCCCCcHHHHHHHhcC-CCCcHHHHHHhCcHHHHHHHHhccCh
Q 044095 117 QELFHLAELQLSSGS-DS--DRLAALYLLERSLLPNPPSDQACQPELMRALCL-AESNRRVAVEAGAVGAVIEVVAELDA 192 (308)
Q Consensus 117 ~~~f~l~~l~lss~~-i~--~~~~AI~lLV~LL~~g~~~~k~~a~a~l~aL~~-~~~Nr~~iV~aGAVp~LVeLL~~~s~ 192 (308)
.++.+|+.+...... .. ...++|+.|+++|+.+...-+..+..++.+|+. .++|+..+++.|+|+.|+++|.+.+.
T Consensus 31 ~a~~~L~~l~~~~~~~~~~i~~~g~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~L~~lL~~~~~ 110 (210)
T 4db6_A 31 SALRKLSQIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSPNE 110 (210)
T ss_dssp HHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTCHHHHHHHTTCSCH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHcCCHHHHHHHHcCCCHHHHHHHHHHHHHHhcCCcHHHHHHHHCCCHHHHHHHHcCCcH
Confidence 455556655432211 00 123799999999998754333333467778884 56899999999999999999999899
Q ss_pred hHHHHHHHHHHHHhcC-hhhHHHHHhccCcHHHHHHHhcCCCHHHHHHHHHHHHHHhcCCcchhhccCCcc-HHHHHHHH
Q 044095 193 AAGERALAALELMCTV-AEGAEETRAHALAVPVMVTMMGQMAGRGKEYAISVLAVIYGGGDQLVVAAPPEE-VARAVELA 270 (308)
Q Consensus 193 ~~~E~ALAiL~~La~~-~eGr~aI~~~~gaIp~LV~lLr~gS~~~KE~AVa~L~sLC~~~~~~v~~a~~~g-v~~Ll~Ll 270 (308)
..++.|+.+|.+|+.. ++.+..+.+ .|+|+.|+++|++.+.+.+++|+.+|++||..+.+....+...| +..|+.++
T Consensus 111 ~v~~~a~~~L~~l~~~~~~~~~~~~~-~~~i~~L~~ll~~~~~~v~~~a~~aL~~l~~~~~~~~~~~~~~g~i~~L~~ll 189 (210)
T 4db6_A 111 QILQEALWALSNIASGGNEQIQAVID-AGALPALVQLLSSPNEQILQEALWALSNIASGGNEQKQAVKEAGALEKLEQLQ 189 (210)
T ss_dssp HHHHHHHHHHHHHTTSCHHHHHHHHH-TTHHHHHHHHTTCSCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHGG
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHH-cCcHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCcHHHHHHHHCCCHHHHHHHH
Confidence 9999999999999964 566677776 78999999999999999999999999999998655444444555 56666555
Q ss_pred HhCCCCHHHHHHHHHHHHHHHh
Q 044095 271 LQGNCTPRGRRKGTQLLKSLKE 292 (308)
Q Consensus 271 lqg~cS~raKrKA~~LLklL~~ 292 (308)
..+ +.+.|++|...|+.|.+
T Consensus 190 ~~~--~~~v~~~a~~aL~~l~~ 209 (210)
T 4db6_A 190 SHE--NEKIQKEAQEALEKLQS 209 (210)
T ss_dssp GCS--CHHHHHHHHHHHHHHCC
T ss_pred hCC--CHHHHHHHHHHHHHHhc
Confidence 544 89999999999998864
No 8
>3l6x_A Catenin delta-1; catenin, armadillo, ARM, JMD, CE adhesion, complex, cell-CELL adhesion, ARVCF, delta-catenin DP120, JAC-1, cell membrane, membrane; 2.40A {Homo sapiens} PDB: 3l6y_A
Probab=99.61 E-value=7.9e-16 Score=156.97 Aligned_cols=159 Identities=9% Similarity=0.036 Sum_probs=132.0
Q ss_pred ccchHHHHHHHhCCCCCCCCCcHHHHHHHhcC-CCCcHHHHHHhCcHHHHHHHHhccChhHHHHHHHHHHHHhcC--hhh
Q 044095 135 RLAALYLLERSLLPNPPSDQACQPELMRALCL-AESNRRVAVEAGAVGAVIEVVAELDAAAGERALAALELMCTV--AEG 211 (308)
Q Consensus 135 ~~~AI~lLV~LL~~g~~~~k~~a~a~l~aL~~-~~~Nr~~iV~aGAVp~LVeLL~~~s~~~~E~ALAiL~~La~~--~eG 211 (308)
....|+.||++|..+....+..+...+.+||. ..+||..|+++|+|+.||++|.+.+.++.+.|+.+|.+|+.. +++
T Consensus 46 ~~~~i~~LV~~L~s~~~~~q~~Aa~~L~~La~~~~~~k~~V~~~G~Ip~LV~LL~s~~~~vq~~Aa~AL~nLa~~~~~~n 125 (584)
T 3l6x_A 46 RQPELPEVIAMLGFRLDAVKSNAAAYLQHLCYRNDKVKTDVRKLKGIPVLVGLLDHPKKEVHLGACGALKNISFGRDQDN 125 (584)
T ss_dssp CCCCHHHHHHHTTCSCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHGGGCSSHHHHHHHHHHHHHHTSSSCHHH
T ss_pred ccccHHHHHHHHCCCCHHHHHHHHHHHHHHHcCChHHHHHHHHcCCcHHHHHHHCCCCHHHHHHHHHHHHHHHccCCHHH
Confidence 35799999999998765445445567889996 678999999999999999999999999999999999999984 899
Q ss_pred HHHHHhccCcHHHHHHHhcC-CCHHHHHHHHHHHHHHhcCCcchhhccCCccHHHHHHHHH---hC-------------C
Q 044095 212 AEETRAHALAVPVMVTMMGQ-MAGRGKEYAISVLAVIYGGGDQLVVAAPPEEVARAVELAL---QG-------------N 274 (308)
Q Consensus 212 r~aI~~~~gaIp~LV~lLr~-gS~~~KE~AVa~L~sLC~~~~~~v~~a~~~gv~~Ll~Lll---qg-------------~ 274 (308)
|.+|.+ .|+|+.||++|+. .+...+|+|+.+||+|+.++..+..++ .+|++.|+.+++ .| .
T Consensus 126 k~~I~~-~GaIp~LV~LL~s~~~~~~~e~aa~aL~nLS~~~~~k~~I~-~~alp~Lv~LL~~p~sg~~~~~~~~~k~~~~ 203 (584)
T 3l6x_A 126 KIAIKN-CDGVPALVRLLRKARDMDLTEVITGTLWNLSSHDSIKMEIV-DHALHALTDEVIIPHSGWEREPNEDCKPRHI 203 (584)
T ss_dssp HHHHHH-TTHHHHHHHHHHHCCSHHHHHHHHHHHHHHTTSGGGHHHHH-HHTHHHHHHHTHHHHHCCC----------CC
T ss_pred HHHHHH-cCCHHHHHHHHcCCCCHHHHHHHHHHHHHHhCCchhhHHHH-hccHHHHHHHHhccccccccccccccccccc
Confidence 999999 6899999999997 577889999999999998766665444 667888877663 12 0
Q ss_pred CCHHHHHHHHHHHHHHHhcCC
Q 044095 275 CTPRGRRKGTQLLKSLKEYGQ 295 (308)
Q Consensus 275 cS~raKrKA~~LLklL~~~~e 295 (308)
.....++.|...|+.|....+
T Consensus 204 ~d~~V~~nAa~~L~NLs~~~~ 224 (584)
T 3l6x_A 204 EWESVLTNTAGCLRNVSSERS 224 (584)
T ss_dssp CCHHHHHHHHHHHHHHTSSCH
T ss_pred ccHHHHHHHHHHHHHHhcCCH
Confidence 135788999999999987653
No 9
>3nmz_A APC variant protein; protein-protein complex, armadillo repeats, cell adhesion-CE complex; 3.01A {Homo sapiens}
Probab=99.60 E-value=1.3e-15 Score=151.01 Aligned_cols=174 Identities=13% Similarity=0.070 Sum_probs=135.0
Q ss_pred HHHHHHHHhHhccCC----CCcccchHHHHHHHhCCCCCCCCCcHHHHHHHhcCC--CCcHHHHHHhCcHHHHHHHH-hc
Q 044095 117 QELFHLAELQLSSGS----DSDRLAALYLLERSLLPNPPSDQACQPELMRALCLA--ESNRRVAVEAGAVGAVIEVV-AE 189 (308)
Q Consensus 117 ~~~f~l~~l~lss~~----i~~~~~AI~lLV~LL~~g~~~~k~~a~a~l~aL~~~--~~Nr~~iV~aGAVp~LVeLL-~~ 189 (308)
.+.++|..|..++.. +.+..++|+.||+||..+....+..+..++++|+.. ++||..|+++|+|+.||++| ..
T Consensus 219 ~Aa~aL~nLa~~~~~~k~~i~~~~GaIp~LV~LL~s~~~~v~~~A~~aL~nLs~~~~~~~k~~I~~~GaI~~LV~lLl~s 298 (458)
T 3nmz_A 219 YAGMALTNLTFGDVANKATLCSMKGCMRALVAQLKSESEDLQQVIASVLRNLSWRADVNSKKTLREVGSVKALMECALEV 298 (458)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHCHHHHHHHHHGGGCSCHHHHHHHHHHHHHHTSSCCHHHHHHHHHTTHHHHHHHHHTTC
T ss_pred HHHHHHHHHhCCCcccHHHHHHcCCcHHHHHHHHhCCCHHHHHHHHHHHHHHhcCCCHHHHHHHHHcCCHHHHHHHHhcC
Confidence 445566666654431 212346799999999976644444455788899874 57999999999999999986 45
Q ss_pred cChhHHHHHHHHHHHHhc-ChhhHHHHHhccCcHHHHHHHhcCCCH----HHHHHHHHHHHHHhc---CCcchhhccCCc
Q 044095 190 LDAAAGERALAALELMCT-VAEGAEETRAHALAVPVMVTMMGQMAG----RGKEYAISVLAVIYG---GGDQLVVAAPPE 261 (308)
Q Consensus 190 ~s~~~~E~ALAiL~~La~-~~eGr~aI~~~~gaIp~LV~lLr~gS~----~~KE~AVa~L~sLC~---~~~~~v~~a~~~ 261 (308)
.+....+.|+.+|.+|+. +++++..|....|+|+.||++|+.+++ .-+++|+.+|++|+. .+.+.+..+...
T Consensus 299 ~~~~v~~~A~~aL~nLs~~~~~nk~~I~~~~Gal~~Lv~LL~~~~~~~~~~v~~~A~~aL~nLs~~~a~~~~~~~~i~~~ 378 (458)
T 3nmz_A 299 KKESTLKSVLSALWNLSAHCTENKADICAVDGALAFLVGTLTYRSQTNTLAIIESGGGILRNVSSLIATNEDHRQILREN 378 (458)
T ss_dssp CSHHHHHHHHHHHHHHHHHCHHHHHHHHHSTTHHHHHHHHTTCCCSSSTTHHHHHHHHHHHHHHHHHTTCHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHHccCCHHHHHHHHHhcCcHHHHHHHhcCCCCcchHHHHHHHHHHHHHHHhcccCCHHHHHHHHHc
Confidence 678899999999999999 889999998668999999999998765 479999999999996 444433334444
Q ss_pred c-HHHHHHHHHhCCCCHHHHHHHHHHHHHHHh
Q 044095 262 E-VARAVELALQGNCTPRGRRKGTQLLKSLKE 292 (308)
Q Consensus 262 g-v~~Ll~Lllqg~cS~raKrKA~~LLklL~~ 292 (308)
| ++.|+.++..+ +...++.|...|..|..
T Consensus 379 G~i~~Lv~LL~~~--~~~v~~~A~~aL~nLa~ 408 (458)
T 3nmz_A 379 NCLQTLLQHLKSH--SLTIVSNACGTLWNLSA 408 (458)
T ss_dssp THHHHHHHHSSCS--CHHHHHHHHHHHHHHHS
T ss_pred ccHHHHHHHHcCC--ChHHHHHHHHHHHHHHc
Confidence 4 67888777666 89999999999998873
No 10
>1xm9_A Plakophilin 1; armadillo repeat, cell adhesion; 2.80A {Homo sapiens} SCOP: a.118.1.24
Probab=99.60 E-value=1.8e-15 Score=147.65 Aligned_cols=156 Identities=11% Similarity=0.086 Sum_probs=124.0
Q ss_pred hHHHHHHHhCCCCCCCCCcHHHHHHHhcCCC-CcHHHHHHhCcHHHHHHHHhccChhHHHHHHHHHHHHhcC-hhhHHHH
Q 044095 138 ALYLLERSLLPNPPSDQACQPELMRALCLAE-SNRRVAVEAGAVGAVIEVVAELDAAAGERALAALELMCTV-AEGAEET 215 (308)
Q Consensus 138 AI~lLV~LL~~g~~~~k~~a~a~l~aL~~~~-~Nr~~iV~aGAVp~LVeLL~~~s~~~~E~ALAiL~~La~~-~eGr~aI 215 (308)
.|+.||++|..+....+..+..++++||... +||..++++|+|+.||++|.+.+.+..+.|+.+|.+|+.. +++|.+|
T Consensus 3 ~l~~lv~~L~s~~~~~q~~A~~~L~~l~~~~~~~~~~i~~~g~i~~Lv~lL~s~~~~~~~~A~~aL~nLa~~~~~~k~~i 82 (457)
T 1xm9_A 3 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLET 82 (457)
T ss_dssp CHHHHHHHHHSSCTHHHHHHHHHHHHHTSSCSSHHHHHHHTTHHHHHHHHTTSSCHHHHHHHHHHHHHHHSSCHHHHHHH
T ss_pred CHHHHHHHHCCCCHHHHHHHHHHHHHHHcCChHHHHHHHHcCCHHHHHHHHcCCCHHHHHHHHHHHHHHhcCCHHHHHHH
Confidence 5899999999887655555567888999664 5688999999999999999988899999999999999987 9999999
Q ss_pred HhccCcHHHHHHHhc-CCCHHHHHHHHHHHHHHhcCCcchhhccCCccHHHHHHHHHh------CCCCHH--------HH
Q 044095 216 RAHALAVPVMVTMMG-QMAGRGKEYAISVLAVIYGGGDQLVVAAPPEEVARAVELALQ------GNCTPR--------GR 280 (308)
Q Consensus 216 ~~~~gaIp~LV~lLr-~gS~~~KE~AVa~L~sLC~~~~~~v~~a~~~gv~~Ll~Lllq------g~cS~r--------aK 280 (308)
.+ .|+|+.||++|+ .++.+.+|+|+.+|++||.++..+.. ++.++++.|+.++.. ++.+.+ ..
T Consensus 83 ~~-~G~i~~Lv~lL~~~~~~~~~~~a~~aL~nLa~~~~~~~~-i~~g~i~~Lv~ll~~~~s~~~~~~~~~~~e~~~~~v~ 160 (457)
T 1xm9_A 83 RR-QNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDELKEE-LIADALPVLADRVIIPFSGWCDGNSNMSREVVDPEVF 160 (457)
T ss_dssp HH-TTCHHHHHHHHTTCCCHHHHHHHHHHHHHHHTSSSTHHH-HHHHHHHHHHHHTTHHHHTCC---------CCCHHHH
T ss_pred HH-cCCHHHHHHHHhhCCCHHHHHHHHHHHHHHhcCHHhHHH-HHhccHHHHHHHHhccccccccCccchhcccccHHHH
Confidence 98 689999999999 78999999999999999998554443 334557788776631 211333 34
Q ss_pred HHHHHHHHHHHhcCC
Q 044095 281 RKGTQLLKSLKEYGQ 295 (308)
Q Consensus 281 rKA~~LLklL~~~~e 295 (308)
+.|...|..|....+
T Consensus 161 ~~a~~aL~nLs~~~~ 175 (457)
T 1xm9_A 161 FNATGCLRNLSSADA 175 (457)
T ss_dssp HHHHHHHHHHTTSHH
T ss_pred HHHHHHHHHHccCHH
Confidence 489999998887643
No 11
>4db6_A Armadillo repeat protein; solenoid repeat, armadillo repeat motif, de novo protein; 1.80A {Synthetic construct} PDB: 4db9_A 4dba_A
Probab=99.55 E-value=3.3e-14 Score=121.49 Aligned_cols=156 Identities=15% Similarity=0.154 Sum_probs=127.1
Q ss_pred ccchHHHHHHHhCCCCCCCCCcHHHHHHHhc-CCCCcHHHHHHhCcHHHHHHHHhccChhHHHHHHHHHHHHhc-ChhhH
Q 044095 135 RLAALYLLERSLLPNPPSDQACQPELMRALC-LAESNRRVAVEAGAVGAVIEVVAELDAAAGERALAALELMCT-VAEGA 212 (308)
Q Consensus 135 ~~~AI~lLV~LL~~g~~~~k~~a~a~l~aL~-~~~~Nr~~iV~aGAVp~LVeLL~~~s~~~~E~ALAiL~~La~-~~eGr 212 (308)
..+..+.|++||..+...-+..+..++++|+ ..++++..+++.|+|+.|+++|.+.+.+..+.|+.+|.+|+. .++.+
T Consensus 10 ~~~~~~~l~~LL~s~~~~v~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~~~~ 89 (210)
T 4db6_A 10 HGSELPQMVQQLNSPDQQELQSALRKLSQIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQI 89 (210)
T ss_dssp ---CHHHHHHHTTCSCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHH
T ss_pred ccchhHHHHHHhcCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHcCCHHHHHHHHcCCCHHHHHHHHHHHHHHhcCCcHHH
Confidence 3478899999998776444433446777888 557889999999999999999998889999999999999995 67888
Q ss_pred HHHHhccCcHHHHHHHhcCCCHHHHHHHHHHHHHHhcCCcchhhccCCcc-HHHHHHHHHhCCCCHHHHHHHHHHHHHHH
Q 044095 213 EETRAHALAVPVMVTMMGQMAGRGKEYAISVLAVIYGGGDQLVVAAPPEE-VARAVELALQGNCTPRGRRKGTQLLKSLK 291 (308)
Q Consensus 213 ~aI~~~~gaIp~LV~lLr~gS~~~KE~AVa~L~sLC~~~~~~v~~a~~~g-v~~Ll~Lllqg~cS~raKrKA~~LLklL~ 291 (308)
..|.+ .|+|+.|+++|.+.+...+++|+.+|.+||.++.+....+...| +..|+.++..+ +.+.++.|...|..|.
T Consensus 90 ~~i~~-~g~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~ll~~~--~~~v~~~a~~aL~~l~ 166 (210)
T 4db6_A 90 QAVID-AGALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSP--NEQILQEALWALSNIA 166 (210)
T ss_dssp HHHHH-TTCHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTTCS--CHHHHHHHHHHHHHHH
T ss_pred HHHHH-CCCHHHHHHHHcCCcHHHHHHHHHHHHHHHcCCHHHHHHHHHcCcHHHHHHHHcCC--CHHHHHHHHHHHHHHH
Confidence 99987 68999999999999999999999999999987765443444455 56777666555 8999999999888887
Q ss_pred hc
Q 044095 292 EY 293 (308)
Q Consensus 292 ~~ 293 (308)
..
T Consensus 167 ~~ 168 (210)
T 4db6_A 167 SG 168 (210)
T ss_dssp TS
T ss_pred cC
Confidence 65
No 12
>4db8_A Armadillo-repeat protein; solenoid repeat, de novo protein; 2.50A {Synthetic construct}
Probab=99.53 E-value=3.6e-14 Score=124.29 Aligned_cols=154 Identities=16% Similarity=0.147 Sum_probs=128.0
Q ss_pred cchHHHHHHHhCCCCCCCCCcHHHHHHHhcC-CCCcHHHHHHhCcHHHHHHHHhccChhHHHHHHHHHHHHhcChhhH-H
Q 044095 136 LAALYLLERSLLPNPPSDQACQPELMRALCL-AESNRRVAVEAGAVGAVIEVVAELDAAAGERALAALELMCTVAEGA-E 213 (308)
Q Consensus 136 ~~AI~lLV~LL~~g~~~~k~~a~a~l~aL~~-~~~Nr~~iV~aGAVp~LVeLL~~~s~~~~E~ALAiL~~La~~~eGr-~ 213 (308)
.++|+.|+++|+.+...-+..+..++.+|+. .++|+..+++.|+|+.|+++|.+.+....+.|+.+|.+|+...+.+ .
T Consensus 53 ~g~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~ 132 (252)
T 4db8_A 53 AGALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQ 132 (252)
T ss_dssp TTHHHHHHHGGGCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHGGGCSCHHHHHHHHHHHHHHTTSCHHHHH
T ss_pred cCcHHHHHHHHcCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHcCCHHHHHHHHcCCCHHHHHHHHHHHHHhhcCCchHHH
Confidence 4899999999998763333333467778886 6789999999999999999999988999999999999999999988 7
Q ss_pred HHHhccCcHHHHHHHhcCCCHHHHHHHHHHHHHHhcCCcchhhccCCcc-HHHHHHHHHhCCCCHHHHHHHHHHHHHHHh
Q 044095 214 ETRAHALAVPVMVTMMGQMAGRGKEYAISVLAVIYGGGDQLVVAAPPEE-VARAVELALQGNCTPRGRRKGTQLLKSLKE 292 (308)
Q Consensus 214 aI~~~~gaIp~LV~lLr~gS~~~KE~AVa~L~sLC~~~~~~v~~a~~~g-v~~Ll~Lllqg~cS~raKrKA~~LLklL~~ 292 (308)
.+.+ .|+|+.|+++|.+.+.+.++.|+.+|.+||.++.+....+...| +..|+.++..+ +...++.|...|..|..
T Consensus 133 ~~~~-~~~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~ll~~~--~~~v~~~a~~~L~~l~~ 209 (252)
T 4db8_A 133 AVID-AGALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSP--NEQILQEALWALSNIAS 209 (252)
T ss_dssp HHHH-TTHHHHHHHGGGCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTCHHHHHHGGGCS--SHHHHHHHHHHHHHHTT
T ss_pred HHHH-CCCHHHHHHHHhCCCHHHHHHHHHHHHHHHcCChHHHHHHHHCCCHHHHHHHHCCC--CHHHHHHHHHHHHHHhc
Confidence 7766 78999999999999999999999999999987755443444444 67777666555 88999999999988864
No 13
>4db8_A Armadillo-repeat protein; solenoid repeat, de novo protein; 2.50A {Synthetic construct}
Probab=99.50 E-value=3.1e-14 Score=124.70 Aligned_cols=174 Identities=16% Similarity=0.177 Sum_probs=133.5
Q ss_pred hHHHHHHHHhHhccCC-CC--cccchHHHHHHHhCCCCCCCCCcHHHHHHHhcCCCCcH-HHHHHhCcHHHHHHHHhccC
Q 044095 116 LQELFHLAELQLSSGS-DS--DRLAALYLLERSLLPNPPSDQACQPELMRALCLAESNR-RVAVEAGAVGAVIEVVAELD 191 (308)
Q Consensus 116 ~~~~f~l~~l~lss~~-i~--~~~~AI~lLV~LL~~g~~~~k~~a~a~l~aL~~~~~Nr-~~iV~aGAVp~LVeLL~~~s 191 (308)
.+++.+|+.+...... .. ...++|+.|+++|+.+....+..+..++++|+...+++ ..+++.|+|+.|+++|.+.+
T Consensus 72 ~~a~~~L~~l~~~~~~~~~~i~~~g~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~lL~~~~ 151 (252)
T 4db8_A 72 QEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSPN 151 (252)
T ss_dssp HHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHGGGCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHGGGCSC
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHcCCHHHHHHHHcCCCHHHHHHHHHHHHHhhcCCchHHHHHHHCCCHHHHHHHHhCCC
Confidence 4555666655542111 00 12479999999999865433433446788999998998 89999999999999999888
Q ss_pred hhHHHHHHHHHHHHhcC-hhhHHHHHhccCcHHHHHHHhcCCCHHHHHHHHHHHHHHhcCCcchhhccCCcc-HHHHHHH
Q 044095 192 AAAGERALAALELMCTV-AEGAEETRAHALAVPVMVTMMGQMAGRGKEYAISVLAVIYGGGDQLVVAAPPEE-VARAVEL 269 (308)
Q Consensus 192 ~~~~E~ALAiL~~La~~-~eGr~aI~~~~gaIp~LV~lLr~gS~~~KE~AVa~L~sLC~~~~~~v~~a~~~g-v~~Ll~L 269 (308)
....+.|+.+|.+|+.. ++.+..+.+ .|+|+.|+++|.+.+..-++.|+.+|.+||..+.+....+...| +..++.+
T Consensus 152 ~~v~~~a~~~L~~l~~~~~~~~~~~~~-~~~i~~L~~ll~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~g~i~~L~~l 230 (252)
T 4db8_A 152 EQILQEALWALSNIASGGNEQIQAVID-AGALPALVQLLSSPNEQILQEALWALSNIASGGNEQKQAVKEAGALEKLEQL 230 (252)
T ss_dssp HHHHHHHHHHHHHHTTSCHHHHHHHHH-TTCHHHHHHGGGCSSHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHcCChHHHHHHHH-CCCHHHHHHHHCCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHCCcHHHHHHH
Confidence 99999999999999985 566667766 78999999999999999999999999999987655443444555 5566655
Q ss_pred HHhCCCCHHHHHHHHHHHHHHHh
Q 044095 270 ALQGNCTPRGRRKGTQLLKSLKE 292 (308)
Q Consensus 270 llqg~cS~raKrKA~~LLklL~~ 292 (308)
+..+ +++.|+.|...|..|..
T Consensus 231 l~~~--~~~v~~~A~~~L~~l~~ 251 (252)
T 4db8_A 231 QSHE--NEKIQKEAQEALEKLQS 251 (252)
T ss_dssp TTCS--SSHHHHTHHHHHHTTC-
T ss_pred hCCC--CHHHHHHHHHHHHHHhc
Confidence 5444 88999999999887653
No 14
>4hxt_A De novo protein OR329; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.95A {Artificial gene}
Probab=99.50 E-value=1.1e-13 Score=119.64 Aligned_cols=179 Identities=16% Similarity=0.162 Sum_probs=137.5
Q ss_pred hHHHHHHHHhHhccCCCC---cccchHHHHHHHhCCCCCCCCCcHHHHHHHhc-CCCCcHHHHHHhCcHHHHHHHHhccC
Q 044095 116 LQELFHLAELQLSSGSDS---DRLAALYLLERSLLPNPPSDQACQPELMRALC-LAESNRRVAVEAGAVGAVIEVVAELD 191 (308)
Q Consensus 116 ~~~~f~l~~l~lss~~i~---~~~~AI~lLV~LL~~g~~~~k~~a~a~l~aL~-~~~~Nr~~iV~aGAVp~LVeLL~~~s 191 (308)
.+++.+|+.+..+....- ...++|+.|+++|+.+...-+..+..++.+|+ ..++++..+++.|+|+.|+++|.+.+
T Consensus 62 ~~a~~~L~~l~~~~~~~~~~~~~~~~i~~l~~ll~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~~l~~~~ 141 (252)
T 4hxt_A 62 KEAARALANIASGPDEAIKAIVDAGGVEVLVKLLTSTDSEVQKEAARALANIASGPDEAIKAIVDAGGVEVLVKLLTSTD 141 (252)
T ss_dssp HHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTTCSSHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTTCSC
T ss_pred HHHHHHHHHHHcCChHHHHHHHHCCCHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHCCCHHHHHHHHcCCC
Confidence 455566666554321100 12379999999999765333333446777899 56789999999999999999999988
Q ss_pred hhHHHHHHHHHHHHhcCh-hhHHHHHhccCcHHHHHHHhcCCCHHHHHHHHHHHHHHhcCCcchhhccCCcc-HHHHHHH
Q 044095 192 AAAGERALAALELMCTVA-EGAEETRAHALAVPVMVTMMGQMAGRGKEYAISVLAVIYGGGDQLVVAAPPEE-VARAVEL 269 (308)
Q Consensus 192 ~~~~E~ALAiL~~La~~~-eGr~aI~~~~gaIp~LV~lLr~gS~~~KE~AVa~L~sLC~~~~~~v~~a~~~g-v~~Ll~L 269 (308)
....+.|+.+|.+|+... +.+..+.+ .|+|+.|+++|.+....-++.|+.+|.+||..+.+....+...| +..++.+
T Consensus 142 ~~~~~~a~~~L~~l~~~~~~~~~~~~~-~~~i~~L~~ll~~~~~~v~~~a~~~L~~l~~~~~~~~~~l~~~~~i~~L~~l 220 (252)
T 4hxt_A 142 SEVQKEAARALANIASGPDEAIKAIVD-AGGVEVLVKLLTSTDSEVQKEAARALANIASGPTSAIKAIVDAGGVEVLQKL 220 (252)
T ss_dssp HHHHHHHHHHHHHHTTSCHHHHHHHHH-TTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTSBHHHHHHHHHTTHHHHHHHG
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHH-CcCHHHHHHHHCCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHCCCHHHHHHH
Confidence 999999999999999854 55567766 78999999999999999999999999999986655444444555 5566665
Q ss_pred HHhCCCCHHHHHHHHHHHHHHHhcCCCC
Q 044095 270 ALQGNCTPRGRRKGTQLLKSLKEYGQPD 297 (308)
Q Consensus 270 llqg~cS~raKrKA~~LLklL~~~~e~~ 297 (308)
+..+ +++.|+.|...|..|.....+.
T Consensus 221 l~~~--~~~v~~~a~~~L~~l~~~~~~~ 246 (252)
T 4hxt_A 221 LTST--DSEVQKEAQRALENIKSGGWLE 246 (252)
T ss_dssp GGCS--CHHHHHHHHHHHHHHHHTCBCC
T ss_pred HCCC--cHHHHHHHHHHHHHHHcCCCcc
Confidence 5544 8899999999999998876543
No 15
>3l6x_A Catenin delta-1; catenin, armadillo, ARM, JMD, CE adhesion, complex, cell-CELL adhesion, ARVCF, delta-catenin DP120, JAC-1, cell membrane, membrane; 2.40A {Homo sapiens} PDB: 3l6y_A
Probab=99.50 E-value=1.1e-13 Score=141.25 Aligned_cols=156 Identities=10% Similarity=0.006 Sum_probs=126.0
Q ss_pred cchHHHHHHHhCCCCCCCCCcHHHHHHHhcCC--CCcHHHHHHhCcHHHHHHHHhc-cChhHHHHHHHHHHHHhcChhhH
Q 044095 136 LAALYLLERSLLPNPPSDQACQPELMRALCLA--ESNRRVAVEAGAVGAVIEVVAE-LDAAAGERALAALELMCTVAEGA 212 (308)
Q Consensus 136 ~~AI~lLV~LL~~g~~~~k~~a~a~l~aL~~~--~~Nr~~iV~aGAVp~LVeLL~~-~s~~~~E~ALAiL~~La~~~eGr 212 (308)
.++|+.||+||+.+....+..+..++++|+.. .+||..|+++|+|+.||++|.+ .+.++.|.|+.+|.+|+.++++|
T Consensus 89 ~G~Ip~LV~LL~s~~~~vq~~Aa~AL~nLa~~~~~~nk~~I~~~GaIp~LV~LL~s~~~~~~~e~aa~aL~nLS~~~~~k 168 (584)
T 3l6x_A 89 LKGIPVLVGLLDHPKKEVHLGACGALKNISFGRDQDNKIAIKNCDGVPALVRLLRKARDMDLTEVITGTLWNLSSHDSIK 168 (584)
T ss_dssp TTHHHHHHHGGGCSSHHHHHHHHHHHHHHTSSSCHHHHHHHHHTTHHHHHHHHHHHCCSHHHHHHHHHHHHHHTTSGGGH
T ss_pred cCCcHHHHHHHCCCCHHHHHHHHHHHHHHHccCCHHHHHHHHHcCCHHHHHHHHcCCCCHHHHHHHHHHHHHHhCCchhh
Confidence 48999999999987755554456788899974 7999999999999999999986 56788999999999999999999
Q ss_pred HHHHhccCcHHHHHHHhc-------C-----------CCHHHHHHHHHHHHHHhcCCcc-hhhccCCccH-HHHHHHHHh
Q 044095 213 EETRAHALAVPVMVTMMG-------Q-----------MAGRGKEYAISVLAVIYGGGDQ-LVVAAPPEEV-ARAVELALQ 272 (308)
Q Consensus 213 ~aI~~~~gaIp~LV~lLr-------~-----------gS~~~KE~AVa~L~sLC~~~~~-~v~~a~~~gv-~~Ll~Lllq 272 (308)
.+|++ ++|+.||++|. . .....+++|+.+|.+|+..+.+ +..+...+|+ ..|+.++..
T Consensus 169 ~~I~~--~alp~Lv~LL~~p~sg~~~~~~~~~k~~~~~d~~V~~nAa~~L~NLs~~~~~~R~~i~~~~Gli~~LV~~L~~ 246 (584)
T 3l6x_A 169 MEIVD--HALHALTDEVIIPHSGWEREPNEDCKPRHIEWESVLTNTAGCLRNVSSERSEARRKLRECDGLVDALIFIVQA 246 (584)
T ss_dssp HHHHH--HTHHHHHHHTHHHHHCCC----------CCCCHHHHHHHHHHHHHHTSSCHHHHHHHHHSTTHHHHHHHHHHH
T ss_pred HHHHh--ccHHHHHHHHhcccccccccccccccccccccHHHHHHHHHHHHHHhcCCHHHHHHHHHcCCcHHHHHHHHHH
Confidence 99996 47999999882 1 1357889999999999998754 3323334554 577766653
Q ss_pred ----CCCCHHHHHHHHHHHHHHHhc
Q 044095 273 ----GNCTPRGRRKGTQLLKSLKEY 293 (308)
Q Consensus 273 ----g~cS~raKrKA~~LLklL~~~ 293 (308)
++.+.+.++.|...|+.|...
T Consensus 247 ~~~~~~~~~~~~enav~aL~NLs~~ 271 (584)
T 3l6x_A 247 EIGQKDSDSKLVENCVCLLRNLSYQ 271 (584)
T ss_dssp HHHTTCCSCHHHHHHHHHHHHHHTT
T ss_pred hhcccCccHHHHHHHHHHHHHhhcc
Confidence 345788999999999998865
No 16
>4hxt_A De novo protein OR329; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.95A {Artificial gene}
Probab=99.49 E-value=1.8e-13 Score=118.37 Aligned_cols=174 Identities=18% Similarity=0.189 Sum_probs=137.1
Q ss_pred hHHHHHHHHhHhccCC-CC--cccchHHHHHHHhCCCCCCCCCcHHHHHHHhcCC-CCcHHHHHHhCcHHHHHHHHhccC
Q 044095 116 LQELFHLAELQLSSGS-DS--DRLAALYLLERSLLPNPPSDQACQPELMRALCLA-ESNRRVAVEAGAVGAVIEVVAELD 191 (308)
Q Consensus 116 ~~~~f~l~~l~lss~~-i~--~~~~AI~lLV~LL~~g~~~~k~~a~a~l~aL~~~-~~Nr~~iV~aGAVp~LVeLL~~~s 191 (308)
.+++++|..+...... .. ...++|+.|+++|+.+....+..+..++.+|+.. ++|+..+++.|+|+.|+++|.+.+
T Consensus 20 ~~a~~~L~~l~~~~~~~~~~~~~~g~i~~L~~ll~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~l~~ll~~~~ 99 (252)
T 4hxt_A 20 KEAARDLAEIASGPASAIKAIVDAGGVEVLVKLLTSTDSEVQKEAARALANIASGPDEAIKAIVDAGGVEVLVKLLTSTD 99 (252)
T ss_dssp HHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTTCSS
T ss_pred HHHHHHHHHHhcCCcHHHHHHHHCCCHHHHHHHHhCCCHHHHHHHHHHHHHHHcCChHHHHHHHHCCCHHHHHHHHcCCC
Confidence 4566666666554321 00 1247999999999987533333334677788877 889999999999999999999989
Q ss_pred hhHHHHHHHHHHHHh-cChhhHHHHHhccCcHHHHHHHhcCCCHHHHHHHHHHHHHHhcCCcchhhccCCcc-HHHHHHH
Q 044095 192 AAAGERALAALELMC-TVAEGAEETRAHALAVPVMVTMMGQMAGRGKEYAISVLAVIYGGGDQLVVAAPPEE-VARAVEL 269 (308)
Q Consensus 192 ~~~~E~ALAiL~~La-~~~eGr~aI~~~~gaIp~LV~lLr~gS~~~KE~AVa~L~sLC~~~~~~v~~a~~~g-v~~Ll~L 269 (308)
.+..+.|+.+|.+|+ ..++.+..+.+ .|+|+.|+++|++.+...++.|+.+|.+|+....+........| +..|+.+
T Consensus 100 ~~v~~~a~~~L~~l~~~~~~~~~~~~~-~~~i~~L~~~l~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~l 178 (252)
T 4hxt_A 100 SEVQKEAARALANIASGPDEAIKAIVD-AGGVEVLVKLLTSTDSEVQKEAARALANIASGPDEAIKAIVDAGGVEVLVKL 178 (252)
T ss_dssp HHHHHHHHHHHHHHTTSCHHHHHHHHH-TTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHH-CCCHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHCcCHHHHHHH
Confidence 999999999999999 57889999988 78999999999999999999999999999987765443344455 5667665
Q ss_pred HHhCCCCHHHHHHHHHHHHHHHh
Q 044095 270 ALQGNCTPRGRRKGTQLLKSLKE 292 (308)
Q Consensus 270 llqg~cS~raKrKA~~LLklL~~ 292 (308)
+.+. ++..++.|...|..|..
T Consensus 179 l~~~--~~~v~~~a~~~L~~l~~ 199 (252)
T 4hxt_A 179 LTST--DSEVQKEAARALANIAS 199 (252)
T ss_dssp TTCS--CHHHHHHHHHHHHHHTT
T ss_pred HCCC--CHHHHHHHHHHHHHHHc
Confidence 5544 78999999998888875
No 17
>1xqr_A HSPBP1 protein; armadillo repeat, superhelical twist, chaperone; 2.10A {Homo sapiens} SCOP: a.118.1.21 PDB: 1xqs_A*
Probab=99.40 E-value=7.8e-13 Score=123.91 Aligned_cols=174 Identities=16% Similarity=0.052 Sum_probs=134.5
Q ss_pred hHHHHHHHHhHhc---cCCCCcccchHHHHHH-HhCCCCCCCCCcHHHHHHHhcCC-CCcHHHHHHhCcHHHHHHHHhc-
Q 044095 116 LQELFHLAELQLS---SGSDSDRLAALYLLER-SLLPNPPSDQACQPELMRALCLA-ESNRRVAVEAGAVGAVIEVVAE- 189 (308)
Q Consensus 116 ~~~~f~l~~l~ls---s~~i~~~~~AI~lLV~-LL~~g~~~~k~~a~a~l~aL~~~-~~Nr~~iV~aGAVp~LVeLL~~- 189 (308)
..+++.|..|.-+ +..+ ...|+++.||. +|..+...-+..+..++++++.. +.+|..+++.|+|+.|+.+|.+
T Consensus 58 ~~Al~~L~~lv~~~dna~~~-~~~G~l~~Lv~~lL~s~~~~vr~~Aa~~Lg~ia~~n~~~~~~vv~~g~l~~Ll~LL~~~ 136 (296)
T 1xqr_A 58 EGALELLADLCENMDNAADF-CQLSGMHLLVGRYLEAGAAGLRWRAAQLIGTCSQNVAAIQEQVLGLGALRKLLRLLDRD 136 (296)
T ss_dssp HHHHHHHHHHHTSHHHHHHH-HHTTHHHHHHHTTTTCSSHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhChhhHHHH-HHcCCHHHHHHHHHcCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHCCCHHHHHHHHccC
Confidence 3456666665442 2222 23589999999 99876543443344677788765 5688999999999999999985
Q ss_pred cChhHHHHHHHHHHHHhc-ChhhHHHHHhccCcHHHHHHHhcCCCHHHHHHHHHHHHHHhcCCcchhhccCCcc-HHHHH
Q 044095 190 LDAAAGERALAALELMCT-VAEGAEETRAHALAVPVMVTMMGQMAGRGKEYAISVLAVIYGGGDQLVVAAPPEE-VARAV 267 (308)
Q Consensus 190 ~s~~~~E~ALAiL~~La~-~~eGr~aI~~~~gaIp~LV~lLr~gS~~~KE~AVa~L~sLC~~~~~~v~~a~~~g-v~~Ll 267 (308)
.+....+.|+.+|.+|+. ++++..++.+ .|+|+.|+++|+++..+-+..|+.+|.+||.++.+....++..| +..|+
T Consensus 137 ~~~~v~~~A~~ALsnl~~~~~~~~~~~~~-~ggi~~L~~lL~~~d~~v~~~A~~aLs~L~~~~~~~~~~vv~~g~i~~Lv 215 (296)
T 1xqr_A 137 ACDTVRVKALFAISCLVREQEAGLLQFLR-LDGFSVLMRAMQQQVQKLKVKSAFLLQNLLVGHPEHKGTLCSMGMVQQLV 215 (296)
T ss_dssp SCHHHHHHHHHHHHHHHTTCHHHHHHHHH-TTHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGGHHHHHHTTHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHcCCcHHHHHHHH-CCCHHHHHHHHcCCCHHHHHHHHHHHHHHHhCChHHHHHHHHcCCHHHHH
Confidence 467889999999999996 5678888888 67999999999999999999999999999987665554555666 56777
Q ss_pred HHHHhCCCCHHHHHHHHHHHHHHHhc
Q 044095 268 ELALQGNCTPRGRRKGTQLLKSLKEY 293 (308)
Q Consensus 268 ~Lllqg~cS~raKrKA~~LLklL~~~ 293 (308)
.|+... +...+++|...|..|...
T Consensus 216 ~LL~~~--d~~v~~~al~aL~~l~~~ 239 (296)
T 1xqr_A 216 ALVRTE--HSPFHEHVLGALCSLVTD 239 (296)
T ss_dssp HHHTSC--CSTHHHHHHHHHHHHHTT
T ss_pred HHHcCC--ChhHHHHHHHHHHHHHhC
Confidence 776655 788999999888777655
No 18
>3now_A UNC-45 protein, SD10334P; armadillo repeat, HSP90, myosin, tetra-tricopeptide repeat, binding protein required for myosin function; 2.99A {Drosophila melanogaster}
Probab=99.39 E-value=1e-12 Score=138.46 Aligned_cols=177 Identities=18% Similarity=0.073 Sum_probs=131.6
Q ss_pred hHHHHHHHHhHhccC---CCCcccchHHHHHHHhCCCCCCCCCcHHHHHHHhcCCCC-----------------------
Q 044095 116 LQELFHLAELQLSSG---SDSDRLAALYLLERSLLPNPPSDQACQPELMRALCLAES----------------------- 169 (308)
Q Consensus 116 ~~~~f~l~~l~lss~---~i~~~~~AI~lLV~LL~~g~~~~k~~a~a~l~aL~~~~~----------------------- 169 (308)
-.++.+|+.|..... .+....++|+.||+||+.+....+..+..++.||+...+
T Consensus 397 ~~AveaLayLS~~~~vk~~lv~d~g~Ip~LV~LL~s~d~~i~~~al~~L~NLt~~~d~q~~~~~l~~la~~s~~~v~~~~ 476 (810)
T 3now_A 397 RWAADGLAYLTLDAECKEKLIEDKASIHALMDLARGGNQSCLYGVVTTFVNLCNAYEKQEMLPEMIELAKFAKQHIPEEH 476 (810)
T ss_dssp HHHHHHHHHHTTSHHHHHHHHHCHHHHHHHHHHHHTTCGGGHHHHHHHHHHHTTCSCCCCCCCSCGGGTTTTCCSCCCSS
T ss_pred HHHHHHHHHHhCCcHHHHHHHHccchHHHHHHHhCCCChHHHHHHHHHHHHHcCCchhhhhhHHHHHHHHHhhccCcccc
Confidence 345555555544322 133446899999999997543333223467778987432
Q ss_pred -------cH---HHHHHhCcHHHHHHHHhccChhHHHHHHHHHHHHhcChhhHHHHHhccCcHHHHHHHhcCCCHHHHHH
Q 044095 170 -------NR---RVAVEAGAVGAVIEVVAELDAAAGERALAALELMCTVAEGAEETRAHALAVPVMVTMMGQMAGRGKEY 239 (308)
Q Consensus 170 -------Nr---~~iV~aGAVp~LVeLL~~~s~~~~E~ALAiL~~La~~~eGr~aI~~~~gaIp~LV~lLr~gS~~~KE~ 239 (308)
++ ..++++|+|+.|+++|.+++.+.+|.|+.+|.+|+.++++|..|.+ .|+|+.||++|++++...|++
T Consensus 477 ~ld~~~~v~~r~~~VveaGaVp~LV~LL~s~s~~vqe~Aa~aL~NLA~d~~~r~~Vv~-~Gaip~Lv~LL~s~~~~~k~~ 555 (810)
T 3now_A 477 ELDDVDFINKRITVLANEGITTALCALAKTESHNSQELIARVLNAVCGLKELRGKVVQ-EGGVKALLRMALEGTEKGKRH 555 (810)
T ss_dssp CHHHHHHHHHHHHHHHHTTHHHHHHHHHTCCCHHHHHHHHHHHHHHHTSHHHHHHHHH-TTHHHHHHHHHHSSCHHHHHH
T ss_pred ccccHHHHHHHHHHHHHCcCHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHHHHHHH-CCCHHHHHHHHccCCHHHHHH
Confidence 33 6789999999999999999999999999999999999999999999 689999999999999999999
Q ss_pred HHHHHHHHhcCCcchhhc---cCCccHHHHHHHHHhCCCCHHHHHHHHHHHHHHHhcC
Q 044095 240 AISVLAVIYGGGDQLVVA---APPEEVARAVELALQGNCTPRGRRKGTQLLKSLKEYG 294 (308)
Q Consensus 240 AVa~L~sLC~~~~~~v~~---a~~~gv~~Ll~Lllqg~cS~raKrKA~~LLklL~~~~ 294 (308)
|+.+|.+||.+.+..... ...+++++|+.|+. .+.+...+..|...|..|....
T Consensus 556 Aa~AL~nL~~~~~p~~~~~~~~~~~aIppLv~LL~-~~~~~l~~~eAl~AL~NLa~~~ 612 (810)
T 3now_A 556 ATQALARIGITINPEVSFSGQRSLDVIRPLLNLLQ-QDCTALENFESLMALTNLASMN 612 (810)
T ss_dssp HHHHHHHHHHHSCHHHHTTTHHHHHTHHHHHHTTS-TTSCHHHHHHHHHHHHHHTTSC
T ss_pred HHHHHHHHhcCCChhhhhcchhhhcHHHHHHHHhC-CCCcHHHHHHHHHHHHHHhcCC
Confidence 999999999865433211 11345788877554 4445566666777777776653
No 19
>3ul1_B Importin subunit alpha-2; arm repeat, armadillo repeat, nuclear transport, nuclear LOC signal binding, importin beta binding; 1.90A {Mus musculus} PDB: 3ukx_B 3uky_B 3ukz_B 3ukw_B 3ul0_B 3oqs_A 3rz9_A 3rzx_A 3uvu_A 1q1s_C 1q1t_C 3knd_A 1ejy_I 1iq1_C 1ejl_I 1pjn_B 1pjm_B 3q5u_A 3fey_C 3fex_C ...
Probab=99.32 E-value=2.6e-12 Score=126.51 Aligned_cols=157 Identities=13% Similarity=0.038 Sum_probs=122.9
Q ss_pred cchHHHHHHHhCCCC-CCCCCcHHHHHHHhcC-CCCcHHHHHHhCcHHHHHHHHhccChhHHHHHHHHHHHHhcC-hhhH
Q 044095 136 LAALYLLERSLLPNP-PSDQACQPELMRALCL-AESNRRVAVEAGAVGAVIEVVAELDAAAGERALAALELMCTV-AEGA 212 (308)
Q Consensus 136 ~~AI~lLV~LL~~g~-~~~k~~a~a~l~aL~~-~~~Nr~~iV~aGAVp~LVeLL~~~s~~~~E~ALAiL~~La~~-~eGr 212 (308)
.|+||.||++|+.+. ..-+..+..++.+|+. ..+|+..+|++|+|+.|+++|.+.+.++++.|+.+|.+|+.+ ++.|
T Consensus 99 ~G~ip~LV~lL~~~~~~~lq~~Aa~aL~nias~~~e~~~~vv~~GaIp~Lv~lL~s~~~~v~e~A~~aL~nLa~d~~~~r 178 (510)
T 3ul1_B 99 AGLIPKFVSFLGKTDCSPIQFESAWALTNIASGTSEQTKAVVDGGAIPAFISLLASPHAHISEQAVWALGNIAGDGSAFR 178 (510)
T ss_dssp TTHHHHHHHHTTCTTCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHTTCHHHH
T ss_pred CCCHHHHHHHHCCCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHCCCHHHHHHHHcCCCHHHHHHHHHHHHHHHhCCHHHH
Confidence 489999999998654 3334345567888875 467899999999999999999999999999999999999986 6778
Q ss_pred HHHHhccCcHHHHHHHhcCC-----CHHHHHHHHHHHHHHhcCCcchhhccC-CccHHHHHHHHHhCCCCHHHHHHHHHH
Q 044095 213 EETRAHALAVPVMVTMMGQM-----AGRGKEYAISVLAVIYGGGDQLVVAAP-PEEVARAVELALQGNCTPRGRRKGTQL 286 (308)
Q Consensus 213 ~aI~~~~gaIp~LV~lLr~g-----S~~~KE~AVa~L~sLC~~~~~~v~~a~-~~gv~~Ll~Lllqg~cS~raKrKA~~L 286 (308)
..+.+ .|+|+.|+.+|... ....+++|+.+|.++|.+......... .+.++.|+.++... +...++.|...
T Consensus 179 ~~v~~-~G~i~~Ll~lL~~~~~~~~~~~~~~~a~~~L~nl~~~~~~~~~~~~~~~~lp~L~~LL~~~--~~~v~~~A~~a 255 (510)
T 3ul1_B 179 DLVIK-HGAIDPLLALLAVPDLSTLACGYLRNLTWTLSNLCRNKNPAPPLDAVEQILPTLVRLLHHN--DPEVLADSCWA 255 (510)
T ss_dssp HHHHH-TTCHHHHHHHTCSSCGGGSCHHHHHHHHHHHHHHHCCCSSCCCHHHHHHHHHHHHHHTTCS--CHHHHHHHHHH
T ss_pred HHHHH-cCChHHHHHHHHhccchhhhHHHHHHHHHHHHHHhhcccchhHHHHHHhHHHHHHHHHhcC--CHHHHHHHHHH
Confidence 88877 78999999999863 345678999999999997654332222 33355666555555 78899999999
Q ss_pred HHHHHhcCC
Q 044095 287 LKSLKEYGQ 295 (308)
Q Consensus 287 LklL~~~~e 295 (308)
|..|.+...
T Consensus 256 L~~L~~~~~ 264 (510)
T 3ul1_B 256 ISYLTDGPN 264 (510)
T ss_dssp HHHHTSSCH
T ss_pred HHHHhhchh
Confidence 988876543
No 20
>3ul1_B Importin subunit alpha-2; arm repeat, armadillo repeat, nuclear transport, nuclear LOC signal binding, importin beta binding; 1.90A {Mus musculus} PDB: 3ukx_B 3uky_B 3ukz_B 3ukw_B 3ul0_B 3oqs_A 3rz9_A 3rzx_A 3uvu_A 1q1s_C 1q1t_C 3knd_A 1ejy_I 1iq1_C 1ejl_I 1pjn_B 1pjm_B 3q5u_A 3fey_C 3fex_C ...
Probab=99.30 E-value=8.9e-12 Score=122.74 Aligned_cols=164 Identities=15% Similarity=0.108 Sum_probs=123.9
Q ss_pred chHHHHHHHhCCCCCCCCCcHHHHHHHhcCCCCc--HHHHHHhCcHHHHHHHHhc-cChhHHHHHHHHHHHHhc-ChhhH
Q 044095 137 AALYLLERSLLPNPPSDQACQPELMRALCLAESN--RRVAVEAGAVGAVIEVVAE-LDAAAGERALAALELMCT-VAEGA 212 (308)
Q Consensus 137 ~AI~lLV~LL~~g~~~~k~~a~a~l~aL~~~~~N--r~~iV~aGAVp~LVeLL~~-~s~~~~E~ALAiL~~La~-~~eGr 212 (308)
-+|+-||+-|..+....+..+...+|.|...++| ...|+++|+||.||++|.. .+..+..+|+.+|.+||+ .++.+
T Consensus 57 ~~i~~~v~~l~s~d~~~q~~a~~~~rklls~e~~ppi~~ii~~G~ip~LV~lL~~~~~~~lq~~Aa~aL~nias~~~e~~ 136 (510)
T 3ul1_B 57 WSVEDIVKGINSNNLESQLQATQAARKLLSREKQPPIDNIIRAGLIPKFVSFLGKTDCSPIQFESAWALTNIASGTSEQT 136 (510)
T ss_dssp CCHHHHHHHHTSSCHHHHHHHHHHHHHHHTCSSCCCHHHHHHTTHHHHHHHHTTCTTCHHHHHHHHHHHHHHHTSCHHHH
T ss_pred hhHHHHHHHhcCCCHHHHHHHHHHHHHHhcCCCCchHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHhcCCHHHH
Confidence 3689999999877644443334455655555555 6899999999999999974 457888999999999987 57889
Q ss_pred HHHHhccCcHHHHHHHhcCCCHHHHHHHHHHHHHHhcCCcchhhccCCcc-HHHHHHHHHhCC---CCHHHHHHHHHHHH
Q 044095 213 EETRAHALAVPVMVTMMGQMAGRGKEYAISVLAVIYGGGDQLVVAAPPEE-VARAVELALQGN---CTPRGRRKGTQLLK 288 (308)
Q Consensus 213 ~aI~~~~gaIp~LV~lLr~gS~~~KE~AVa~L~sLC~~~~~~v~~a~~~g-v~~Ll~Lllqg~---cS~raKrKA~~LLk 288 (308)
.+|.+ .|+|+.||++|++.+..-||+|+.+|++|+.++.+....++..| +..|+.++...+ .....++.|...|.
T Consensus 137 ~~vv~-~GaIp~Lv~lL~s~~~~v~e~A~~aL~nLa~d~~~~r~~v~~~G~i~~Ll~lL~~~~~~~~~~~~~~~a~~~L~ 215 (510)
T 3ul1_B 137 KAVVD-GGAIPAFISLLASPHAHISEQAVWALGNIAGDGSAFRDLVIKHGAIDPLLALLAVPDLSTLACGYLRNLTWTLS 215 (510)
T ss_dssp HHHHH-TTHHHHHHHHTTCSCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTCHHHHHHHTCSSCGGGSCHHHHHHHHHHHH
T ss_pred HHHHH-CCCHHHHHHHHcCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHcCChHHHHHHHHhccchhhhHHHHHHHHHHHH
Confidence 99988 78999999999999999999999999999988765444444555 667766554332 13456778888888
Q ss_pred HHHhcCCCCCccc
Q 044095 289 SLKEYGQPDTTQD 301 (308)
Q Consensus 289 lL~~~~e~~~~~~ 301 (308)
.+.+.......++
T Consensus 216 nl~~~~~~~~~~~ 228 (510)
T 3ul1_B 216 NLCRNKNPAPPLD 228 (510)
T ss_dssp HHHCCCSSCCCHH
T ss_pred HHhhcccchhHHH
Confidence 8877665544433
No 21
>3now_A UNC-45 protein, SD10334P; armadillo repeat, HSP90, myosin, tetra-tricopeptide repeat, binding protein required for myosin function; 2.99A {Drosophila melanogaster}
Probab=99.29 E-value=1.7e-11 Score=129.17 Aligned_cols=153 Identities=15% Similarity=0.146 Sum_probs=120.9
Q ss_pred hHHHHHHHhCCC--CCCCCCcHHHHHHHhcCCCCcHHHHHH-hCcHHHHHHHHhccChhHHHHHHHHHHHHhcChh----
Q 044095 138 ALYLLERSLLPN--PPSDQACQPELMRALCLAESNRRVAVE-AGAVGAVIEVVAELDAAAGERALAALELMCTVAE---- 210 (308)
Q Consensus 138 AI~lLV~LL~~g--~~~~k~~a~a~l~aL~~~~~Nr~~iV~-aGAVp~LVeLL~~~s~~~~E~ALAiL~~La~~~e---- 210 (308)
.++.|+++|..+ ....+..+...++.|+...++|..++. .|+|+.||++|.+.+......|+.+|.+|+...|
T Consensus 378 Lv~~l~~lL~~~~~d~~v~~~AveaLayLS~~~~vk~~lv~d~g~Ip~LV~LL~s~d~~i~~~al~~L~NLt~~~d~q~~ 457 (810)
T 3now_A 378 LAEACRRFLIKPGKDKDIRRWAADGLAYLTLDAECKEKLIEDKASIHALMDLARGGNQSCLYGVVTTFVNLCNAYEKQEM 457 (810)
T ss_dssp HHHHHHHHHHCSSCCSSHHHHHHHHHHHHTTSHHHHHHHHHCHHHHHHHHHHHHTTCGGGHHHHHHHHHHHTTCSCCCCC
T ss_pred HHHHHHHHhcCCCCCHHHHHHHHHHHHHHhCCcHHHHHHHHccchHHHHHHHhCCCChHHHHHHHHHHHHHcCCchhhhh
Confidence 466788888876 232333344678889999999999986 7999999999998888899999999999998432
Q ss_pred --------------------------hH---HHHHhccCcHHHHHHHhcCCCHHHHHHHHHHHHHHhcCCcchhhccCCc
Q 044095 211 --------------------------GA---EETRAHALAVPVMVTMMGQMAGRGKEYAISVLAVIYGGGDQLVVAAPPE 261 (308)
Q Consensus 211 --------------------------Gr---~aI~~~~gaIp~LV~lLr~gS~~~KE~AVa~L~sLC~~~~~~v~~a~~~ 261 (308)
.+ .+|.+ .|+|+.||++|+++++..||+|+.+|.+|+.+...+ ..++..
T Consensus 458 ~~~l~~la~~s~~~v~~~~~ld~~~~v~~r~~~Vve-aGaVp~LV~LL~s~s~~vqe~Aa~aL~NLA~d~~~r-~~Vv~~ 535 (810)
T 3now_A 458 LPEMIELAKFAKQHIPEEHELDDVDFINKRITVLAN-EGITTALCALAKTESHNSQELIARVLNAVCGLKELR-GKVVQE 535 (810)
T ss_dssp CCSCGGGTTTTCCSCCCSSCHHHHHHHHHHHHHHHH-TTHHHHHHHHHTCCCHHHHHHHHHHHHHHHTSHHHH-HHHHHT
T ss_pred hHHHHHHHHHhhccCccccccccHHHHHHHHHHHHH-CcCHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHH-HHHHHC
Confidence 12 56777 689999999999999999999999999999754433 334445
Q ss_pred c-HHHHHHHHHhCCCCHHHHHHHHHHHHHHHhcC
Q 044095 262 E-VARAVELALQGNCTPRGRRKGTQLLKSLKEYG 294 (308)
Q Consensus 262 g-v~~Ll~Lllqg~cS~raKrKA~~LLklL~~~~ 294 (308)
| ++.|+.++..| +...|+.|+..|..|....
T Consensus 536 Gaip~Lv~LL~s~--~~~~k~~Aa~AL~nL~~~~ 567 (810)
T 3now_A 536 GGVKALLRMALEG--TEKGKRHATQALARIGITI 567 (810)
T ss_dssp THHHHHHHHHHSS--CHHHHHHHHHHHHHHHHHS
T ss_pred CCHHHHHHHHccC--CHHHHHHHHHHHHHHhcCC
Confidence 5 67888887777 8999999998777766543
No 22
>1jdh_A Beta-catenin; beta-catenin, protein-protein complex, transcription; 1.90A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qz7_A 1g3j_A 1th1_A* 1i7w_A* 1i7x_A 1jpp_A 1m1e_A 1v18_A* 3oux_A 3ouw_A 1jpw_A 3tx7_A* 2gl7_A 1t08_A 1luj_A 2bct_A 3bct_A* 3ifq_A* 3sla_A 3sl9_A
Probab=99.28 E-value=7.6e-12 Score=120.08 Aligned_cols=154 Identities=17% Similarity=0.140 Sum_probs=123.4
Q ss_pred cchHHHHHHHhCCCCCCCCCcHHHHHHHhcCCCCcHHHHHHh-CcHHHHHHHHhcc-ChhHHHHHHHHHHHHhcChhhHH
Q 044095 136 LAALYLLERSLLPNPPSDQACQPELMRALCLAESNRRVAVEA-GAVGAVIEVVAEL-DAAAGERALAALELMCTVAEGAE 213 (308)
Q Consensus 136 ~~AI~lLV~LL~~g~~~~k~~a~a~l~aL~~~~~Nr~~iV~a-GAVp~LVeLL~~~-s~~~~E~ALAiL~~La~~~eGr~ 213 (308)
.++|+.|+++|..+....+..+..++.+|+..++||..+++. |+|+.|+++|.+. +.+..+.|+.+|.+|+..++++.
T Consensus 16 ~~~i~~Lv~lL~~~~~~v~~~A~~~L~~l~~~~~~~~~~~~~~~~i~~Lv~~L~~~~~~~~~~~a~~~L~~ls~~~~~~~ 95 (529)
T 1jdh_A 16 TRAIPELTKLLNDEDQVVVNKAAVMVHQLSKKEASRHAIMRSPQMVSAIVRTMQNTNDVETARCTAGTLHNLSHHREGLL 95 (529)
T ss_dssp -CHHHHHHHHHTCSCHHHHHHHHHHHHHHHTSHHHHHHHHTCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHTTSHHHHH
T ss_pred HhhHHHHHHHhCCCCHHHHHHHHHHHHHHHcCCccHHHHHhCcchHHHHHHHHhcCCCHHHHHHHHHHHHHHHcCchhHH
Confidence 479999999999665434433456777899888899888865 9999999999755 77889999999999999999999
Q ss_pred HHHhccCcHHHHHHHhcCCCHHHHHHHHHHHHHHhcCCcchhhccCCcc-HHHHHHHHHhCCCCHHHHHHHHHHHHHHHh
Q 044095 214 ETRAHALAVPVMVTMMGQMAGRGKEYAISVLAVIYGGGDQLVVAAPPEE-VARAVELALQGNCTPRGRRKGTQLLKSLKE 292 (308)
Q Consensus 214 aI~~~~gaIp~LV~lLr~gS~~~KE~AVa~L~sLC~~~~~~v~~a~~~g-v~~Ll~Lllqg~cS~raKrKA~~LLklL~~ 292 (308)
.|.+ .|+|+.|+++|++.....+++|+.+|++||.++++....+...| ++.|+.++.++ +.+.+..+...|..|..
T Consensus 96 ~i~~-~g~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~L~~ll~~~--~~~~~~~~~~~L~~la~ 172 (529)
T 1jdh_A 96 AIFK-SGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNKT--NVKFLAITTDCLQILAY 172 (529)
T ss_dssp HHHH-TTHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHCTTHHHHHHHHTHHHHHHHGGGCC--CHHHHHHHHHHHHHHHT
T ss_pred HHHH-cCCHHHHHHHHcCCCHHHHHHHHHHHHHHhcCCcchHHHHHHcCCHHHHHHHHhcC--CHHHHHHHHHHHHHHHh
Confidence 9998 58999999999999999999999999999987654333333344 66777666554 77777777777766654
No 23
>1jdh_A Beta-catenin; beta-catenin, protein-protein complex, transcription; 1.90A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qz7_A 1g3j_A 1th1_A* 1i7w_A* 1i7x_A 1jpp_A 1m1e_A 1v18_A* 3oux_A 3ouw_A 1jpw_A 3tx7_A* 2gl7_A 1t08_A 1luj_A 2bct_A 3bct_A* 3ifq_A* 3sla_A 3sl9_A
Probab=99.27 E-value=7.3e-12 Score=120.19 Aligned_cols=158 Identities=11% Similarity=0.088 Sum_probs=124.7
Q ss_pred cchHHHHHHHhCCCC-CCCCCcHHHHHHHhcCCCCcHHHHHHhCcHHHHHHHHhccChhHHHHHHHHHHHHhcC-hhhHH
Q 044095 136 LAALYLLERSLLPNP-PSDQACQPELMRALCLAESNRRVAVEAGAVGAVIEVVAELDAAAGERALAALELMCTV-AEGAE 213 (308)
Q Consensus 136 ~~AI~lLV~LL~~g~-~~~k~~a~a~l~aL~~~~~Nr~~iV~aGAVp~LVeLL~~~s~~~~E~ALAiL~~La~~-~eGr~ 213 (308)
.++|+.|+++|..+. ...+..+..++++|+..++||..+++.|+|+.|+++|.+.+....+.|+.+|.+|+.. ++.+.
T Consensus 58 ~~~i~~Lv~~L~~~~~~~~~~~a~~~L~~ls~~~~~~~~i~~~g~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~ 137 (529)
T 1jdh_A 58 PQMVSAIVRTMQNTNDVETARCTAGTLHNLSHHREGLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKM 137 (529)
T ss_dssp HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHTTSHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHCTTHHH
T ss_pred cchHHHHHHHHhcCCCHHHHHHHHHHHHHHHcCchhHHHHHHcCCHHHHHHHHcCCCHHHHHHHHHHHHHHhcCCcchHH
Confidence 479999999998653 2223334467788998888999999999999999999988899999999999999997 46677
Q ss_pred HHHhccCcHHHHHHHhcCCCHHHHHHHHHHHHHHhcCCcchhhc-cCCccHHHHHHHHHhCCCCHHHHHHHHHHHHHHHh
Q 044095 214 ETRAHALAVPVMVTMMGQMAGRGKEYAISVLAVIYGGGDQLVVA-APPEEVARAVELALQGNCTPRGRRKGTQLLKSLKE 292 (308)
Q Consensus 214 aI~~~~gaIp~LV~lLr~gS~~~KE~AVa~L~sLC~~~~~~v~~-a~~~gv~~Ll~Lllqg~cS~raKrKA~~LLklL~~ 292 (308)
.|.+ .|+|+.|+++|++.+.+.++.++.+|.+|+..+.+.... ...+++..++.++..++ ....++.+..+|..|..
T Consensus 138 ~i~~-~g~i~~L~~ll~~~~~~~~~~~~~~L~~la~~~~~~~~~i~~~~~i~~L~~ll~~~~-~~~~~~~a~~~L~~l~~ 215 (529)
T 1jdh_A 138 AVRL-AGGLQKMVALLNKTNVKFLAITTDCLQILAYGNQESKLIILASGGPQALVNIMRTYT-YEKLLWTTSRVLKVLSV 215 (529)
T ss_dssp HHHH-HTHHHHHHHGGGCCCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHHHCC-CHHHHHHHHHHHHHHTT
T ss_pred HHHH-cCCHHHHHHHHhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHCCCHHHHHHHHHhCC-hHHHHHHHHHHHHHHhc
Confidence 7766 689999999999999999999999999999865433322 33455777877776663 45556667788888876
Q ss_pred cCC
Q 044095 293 YGQ 295 (308)
Q Consensus 293 ~~e 295 (308)
+.+
T Consensus 216 ~~~ 218 (529)
T 1jdh_A 216 CSS 218 (529)
T ss_dssp STT
T ss_pred Ccc
Confidence 554
No 24
>2z6g_A B-catenin; FULL-length, beta-catenin, cell adhesion; 3.40A {Danio rerio}
Probab=99.26 E-value=1.2e-11 Score=128.60 Aligned_cols=156 Identities=13% Similarity=0.009 Sum_probs=122.2
Q ss_pred cchHHHHHHHhCCCCCCCCCcHHHHHHHhcCC-CCcHHHHHHhCcHHHHHHHHhccChhHHHHHHHHHHHHhc-ChhhHH
Q 044095 136 LAALYLLERSLLPNPPSDQACQPELMRALCLA-ESNRRVAVEAGAVGAVIEVVAELDAAAGERALAALELMCT-VAEGAE 213 (308)
Q Consensus 136 ~~AI~lLV~LL~~g~~~~k~~a~a~l~aL~~~-~~Nr~~iV~aGAVp~LVeLL~~~s~~~~E~ALAiL~~La~-~~eGr~ 213 (308)
.++|+.|+++|+.+....+..+..++.+||.. ++++..+++.|+|+.|+++|.+.+....+.++.+|.+|+. +++++.
T Consensus 233 ~g~I~~Lv~lL~~~~~~v~~~A~~aL~nLa~~~~~~~~~v~~~g~v~~Lv~lL~~~~~~v~~~a~~aL~~La~~~~e~~~ 312 (780)
T 2z6g_A 233 SGGIPALVNMLGSPVDSVLFHAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNKTNVKFLAITTDCLQILAYGNQESKL 312 (780)
T ss_dssp TTHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHSTTHHHHHHHTTHHHHHHHGGGCCCHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred cCCHHHHHHHHcCCCHHHHHHHHHHHHHHhCCChhhHHHHHHcCCHHHHHHHHhcCCHHHHHHHHHHHHHHhcCChHHHH
Confidence 48999999999987644454455678889876 4567777789999999999998778888899999999996 689999
Q ss_pred HHHhccCcHHHHHHHhcCCC-HHHHHHHHHHHHHHhcCCcchhhccCCcc-HHHHHHHHHhCCCCHHHHHHHHHHHHHHH
Q 044095 214 ETRAHALAVPVMVTMMGQMA-GRGKEYAISVLAVIYGGGDQLVVAAPPEE-VARAVELALQGNCTPRGRRKGTQLLKSLK 291 (308)
Q Consensus 214 aI~~~~gaIp~LV~lLr~gS-~~~KE~AVa~L~sLC~~~~~~v~~a~~~g-v~~Ll~Lllqg~cS~raKrKA~~LLklL~ 291 (308)
+|.+ .++|+.||++|++++ ...+++|+.+|++||.....+. .++..| +..|+.++..+ +...+++|...|..|.
T Consensus 313 ~i~~-~~~i~~Lv~lL~~~~~~~~~~~a~~aL~~Ls~~~~~~~-~i~~~g~l~~Ll~lL~~~--~~~~~~~a~~~L~~L~ 388 (780)
T 2z6g_A 313 IILA-SGGPQALVNIMRTYTYEKLLWTTSRVLKVLSVCSSNKP-AIVEAGGMQALGLHLTDP--SQRLVQNCLWTLRNLS 388 (780)
T ss_dssp HHHT-TTHHHHHHHHHTTCCCHHHHHHHHHHHHHHHTSTTHHH-HHHHTTHHHHHGGGTTCS--CHHHHHHHHHHHHHHH
T ss_pred HHHH-cCCHHHHHHHHhcCCHHHHHHHHHHHHHHhhcChHHHH-HHHHhchHHHHHHHHcCC--chHHHHHHHHHHHHHh
Confidence 9988 589999999999874 5566789999999998665443 233444 56666555444 7888899988888887
Q ss_pred hcCC
Q 044095 292 EYGQ 295 (308)
Q Consensus 292 ~~~e 295 (308)
+...
T Consensus 389 ~~~~ 392 (780)
T 2z6g_A 389 DAAT 392 (780)
T ss_dssp TTCT
T ss_pred ccch
Confidence 6543
No 25
>3tpo_A Importin subunit alpha-2; nuclear import, protein transport; 2.10A {Mus musculus} PDB: 1qgk_B 1qgr_B
Probab=99.25 E-value=4.2e-11 Score=118.12 Aligned_cols=174 Identities=15% Similarity=0.092 Sum_probs=134.2
Q ss_pred HHHHHHHHhHhccCCCC---cccchHHHHHHHhCCCCCCCCCcHHHHHHHhcCCCC-cHHHHHHhCcHHHHHHHHhccCh
Q 044095 117 QELFHLAELQLSSGSDS---DRLAALYLLERSLLPNPPSDQACQPELMRALCLAES-NRRVAVEAGAVGAVIEVVAELDA 192 (308)
Q Consensus 117 ~~~f~l~~l~lss~~i~---~~~~AI~lLV~LL~~g~~~~k~~a~a~l~aL~~~~~-Nr~~iV~aGAVp~LVeLL~~~s~ 192 (308)
...++|+.+..++.... ...++|+.|++||..+....+..+..++++|+.... ++..++++|+|+.|+++|.+.+.
T Consensus 228 ~a~~~L~nl~~~~~~~~~~~~~~~~lp~L~~LL~~~~~~v~~~a~~aL~~l~~~~~~~~~~v~~~g~i~~Lv~lL~~~~~ 307 (529)
T 3tpo_A 228 NLTWTLSNLCRNKNPAPPLDAVEQILPTLVRLLHHNDPEVLADSCWAISYLTDGPNERIEMVVKKGVVPQLVKLLGATEL 307 (529)
T ss_dssp HHHHHHHHHHCCCTTCCCHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHSSCHHHHHHHHTTTCHHHHHHHHTCSCH
T ss_pred HHHHHHHHHHhcccchhhHHHHhhHHHHHHHHhcCCcHHHHHHHHHHHHHhhhhhhhhHHHHHhccchHHHHHHhcCCCh
Confidence 35667777766654322 234799999999987664334333356667776654 45667889999999999999889
Q ss_pred hHHHHHHHHHHHHhcC-hhhHHHHHhccCcHHHHHHHhcCCCHHHHHHHHHHHHHHhcCCcchhhccCCcc-HHHHHHHH
Q 044095 193 AAGERALAALELMCTV-AEGAEETRAHALAVPVMVTMMGQMAGRGKEYAISVLAVIYGGGDQLVVAAPPEE-VARAVELA 270 (308)
Q Consensus 193 ~~~E~ALAiL~~La~~-~eGr~aI~~~~gaIp~LV~lLr~gS~~~KE~AVa~L~sLC~~~~~~v~~a~~~g-v~~Ll~Ll 270 (308)
.+.+.|+.+|.+|+.. ++.+..|.+ .|+++.|+.+|.......|+.|+.+|.+||.+..+....+...| ++.|+.++
T Consensus 308 ~v~~~a~~aL~nl~~~~~~~~~~i~~-~g~l~~L~~LL~~~~~~i~~~a~~aL~nl~~~~~~~~~~v~~~g~i~~Lv~lL 386 (529)
T 3tpo_A 308 PIVTPALRAIGNIVTGTDEQTQKVID-AGALAVFPSLLTNPKTNIQKEATWTMSNITAGRQDQIQQVVNHGLVPFLVGVL 386 (529)
T ss_dssp HHHHHHHHHHHHHTTSCHHHHHHHHH-TTGGGGHHHHTTCSSHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHccchHHHHHHhh-cccHHHHHHHHcCCCHHHHHHHHHHHHHHhcccHHHHHHHHhcCcHHHHHHHh
Confidence 9999999999999875 567777777 78999999999999999999999999999998766554455566 56777666
Q ss_pred HhCCCCHHHHHHHHHHHHHHHhc
Q 044095 271 LQGNCTPRGRRKGTQLLKSLKEY 293 (308)
Q Consensus 271 lqg~cS~raKrKA~~LLklL~~~ 293 (308)
..+ +.+.|+.|...|..|...
T Consensus 387 ~~~--~~~v~~~A~~aL~nl~~~ 407 (529)
T 3tpo_A 387 SKA--DFKTQKAAAWAITNYTSG 407 (529)
T ss_dssp HSS--CHHHHHHHHHHHHHHHHH
T ss_pred cCC--CHHHHHHHHHHHHHHHcC
Confidence 666 889999999888777643
No 26
>2z6h_A Catenin beta-1, beta-catenin; C-terminal domain, activator, alternative splicing, cell adhesion, cytoplasm, cytoskeleton, disease mutation, nucleus; 2.20A {Homo sapiens}
Probab=99.23 E-value=2.3e-11 Score=122.36 Aligned_cols=159 Identities=11% Similarity=0.096 Sum_probs=125.4
Q ss_pred cchHHHHHHHhCCCC-CCCCCcHHHHHHHhcCCCCcHHHHHHhCcHHHHHHHHhccChhHHHHHHHHHHHHhcC-hhhHH
Q 044095 136 LAALYLLERSLLPNP-PSDQACQPELMRALCLAESNRRVAVEAGAVGAVIEVVAELDAAAGERALAALELMCTV-AEGAE 213 (308)
Q Consensus 136 ~~AI~lLV~LL~~g~-~~~k~~a~a~l~aL~~~~~Nr~~iV~aGAVp~LVeLL~~~s~~~~E~ALAiL~~La~~-~eGr~ 213 (308)
.++|+.|+++|..+. ...+..+..++++|+...+||..+++.|+|+.|+++|.+.+...++.|+.+|.+|+.. ++.+.
T Consensus 55 ~~~i~~Lv~~L~~~~~~~~~~~A~~~L~~Ls~~~~~~~~i~~~g~i~~Lv~lL~~~~~~v~~~A~~aL~nL~~~~~~~~~ 134 (644)
T 2z6h_A 55 PQMVSAIVRTMQNTNDVETARCTAGTLHNLSHHREGLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKM 134 (644)
T ss_dssp HHHHHHHHHHHHSCCCHHHHHHHHHHHHHHTTSHHHHHHHHTTTHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHSTTHHH
T ss_pred cChHHHHHHHHhcCCCHHHHHHHHHHHHHHhcChhhHHHHHHcCCHHHHHHHHhCCCHHHHHHHHHHHHHHHhCcchhHH
Confidence 478999999998753 2233334467778998888999999999999999999988899999999999999987 46677
Q ss_pred HHHhccCcHHHHHHHhcCCCHHHHHHHHHHHHHHhcCCcc-hhhccCCccHHHHHHHHHhCCCCHHHHHHHHHHHHHHHh
Q 044095 214 ETRAHALAVPVMVTMMGQMAGRGKEYAISVLAVIYGGGDQ-LVVAAPPEEVARAVELALQGNCTPRGRRKGTQLLKSLKE 292 (308)
Q Consensus 214 aI~~~~gaIp~LV~lLr~gS~~~KE~AVa~L~sLC~~~~~-~v~~a~~~gv~~Ll~Lllqg~cS~raKrKA~~LLklL~~ 292 (308)
.|.+ .|+|+.||++|++.+.+.+..|+.+|.+|+..+.+ +......+++..|+.++..++ ....++.|..+|..|..
T Consensus 135 ~v~~-~g~i~~Lv~lL~~~~~~~~~~a~~~L~~La~~~~~~~~~i~~~g~v~~Lv~lL~~~~-~~~~~~~a~~~L~nLs~ 212 (644)
T 2z6h_A 135 AVRL-AGGLQKMVALLNKTNVKFLAITTDCLQILAYGNQESKLIILASGGPQALVNIMRTYT-YEKLLWTTSRVLKVLSV 212 (644)
T ss_dssp HHHH-TTHHHHHHHGGGCCCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHTTCC-CHHHHHHHHHHHHHHTT
T ss_pred HHHH-CCChHHHHHHHCcCCHHHHHHHHHHHHHHHhcCcHHHHHHHHcCChHHHHHHHHcCC-hHHHHHHHHHHHHHHhc
Confidence 7766 68999999999999888888888999999985543 332233455677777665553 56777888899988877
Q ss_pred cCCC
Q 044095 293 YGQP 296 (308)
Q Consensus 293 ~~e~ 296 (308)
+.++
T Consensus 213 ~~~~ 216 (644)
T 2z6h_A 213 CSSN 216 (644)
T ss_dssp CTTH
T ss_pred Cccc
Confidence 6553
No 27
>4b8j_A Importin subunit alpha-1A; transport protein, nuclear localization signal; 2.00A {Oryza sativa japonica group} PDB: 4b8o_A 2yns_A 4b8p_A
Probab=99.22 E-value=7e-11 Score=114.92 Aligned_cols=156 Identities=13% Similarity=0.055 Sum_probs=124.6
Q ss_pred cchHHHHHHHhCCCC-CCCCCcHHHHHHHhcCC-CCcHHHHHHhCcHHHHHHHHhccChhHHHHHHHHHHHHhcC-hhhH
Q 044095 136 LAALYLLERSLLPNP-PSDQACQPELMRALCLA-ESNRRVAVEAGAVGAVIEVVAELDAAAGERALAALELMCTV-AEGA 212 (308)
Q Consensus 136 ~~AI~lLV~LL~~g~-~~~k~~a~a~l~aL~~~-~~Nr~~iV~aGAVp~LVeLL~~~s~~~~E~ALAiL~~La~~-~eGr 212 (308)
.++|+.|+++|..+. ...+..+..++.+|+.. .+|+..+++.|+|+.|+++|.+.+..+.+.|+.+|.+|+.. ++.+
T Consensus 116 ~g~v~~Lv~lL~~~~~~~v~~~A~~~L~~l~~~~~~~~~~~~~~g~i~~L~~lL~~~~~~v~~~a~~aL~~l~~~~~~~~ 195 (528)
T 4b8j_A 116 SGVVPRFVQFLTREDFPQLQFEAAWALTNIASGTSENTKVVIDHGAVPIFVKLLGSSSDDVREQAVWALGNVAGDSPKCR 195 (528)
T ss_dssp TTCHHHHHHHHTCTTCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHHTCHHHH
T ss_pred CCCHHHHHHHhCCCCCHHHHHHHHHHHHHHhCCCHHHHHHHHhCCcHHHHHHHhcCCCHHHHHHHHHHHHHHhCCChhhH
Confidence 479999999998764 32333334567788865 78999999999999999999988899999999999999976 5678
Q ss_pred HHHHhccCcHHHHHHHhc-CCCHHHHHHHHHHHHHHhcCCcchhhccCCccHHHHHHHHHhCCCCHHHHHHHHHHHHHHH
Q 044095 213 EETRAHALAVPVMVTMMG-QMAGRGKEYAISVLAVIYGGGDQLVVAAPPEEVARAVELALQGNCTPRGRRKGTQLLKSLK 291 (308)
Q Consensus 213 ~aI~~~~gaIp~LV~lLr-~gS~~~KE~AVa~L~sLC~~~~~~v~~a~~~gv~~Ll~Lllqg~cS~raKrKA~~LLklL~ 291 (308)
..+.. .|+|+.|+++|. ..+...+++|+.+|++||.+..........+++..|+.++..+ +...+..|...|..|.
T Consensus 196 ~~i~~-~g~l~~Ll~lL~~~~~~~v~~~a~~~L~~L~~~~~~~~~~~~~~~l~~L~~lL~~~--~~~v~~~a~~aL~~l~ 272 (528)
T 4b8j_A 196 DLVLA-NGALLPLLAQLNEHTKLSMLRNATWTLSNFCRGKPQPSFEQTRPALPALARLIHSN--DEEVLTDACWALSYLS 272 (528)
T ss_dssp HHHHH-TTCHHHHHHTCCTTCCHHHHHHHHHHHHHHHCSSSCCCHHHHTTHHHHHHHHTTCC--CHHHHHHHHHHHHHHT
T ss_pred HHHHH-CCcHHHHHHHHhcCCCHHHHHHHHHHHHHHHcCCCCCcHHHHHHHHHHHHHHHCCC--CHHHHHHHHHHHHHHH
Confidence 88877 689999999995 5688999999999999998764333234455567777666555 7889999998888887
Q ss_pred hcC
Q 044095 292 EYG 294 (308)
Q Consensus 292 ~~~ 294 (308)
...
T Consensus 273 ~~~ 275 (528)
T 4b8j_A 273 DGT 275 (528)
T ss_dssp SSC
T ss_pred cCC
Confidence 543
No 28
>2z6h_A Catenin beta-1, beta-catenin; C-terminal domain, activator, alternative splicing, cell adhesion, cytoplasm, cytoskeleton, disease mutation, nucleus; 2.20A {Homo sapiens}
Probab=99.22 E-value=3.1e-11 Score=121.40 Aligned_cols=154 Identities=17% Similarity=0.138 Sum_probs=124.4
Q ss_pred cchHHHHHHHhCCCCCCCCCcHHHHHHHhcCCCCcHHHHHHh-CcHHHHHHHHhcc-ChhHHHHHHHHHHHHhcChhhHH
Q 044095 136 LAALYLLERSLLPNPPSDQACQPELMRALCLAESNRRVAVEA-GAVGAVIEVVAEL-DAAAGERALAALELMCTVAEGAE 213 (308)
Q Consensus 136 ~~AI~lLV~LL~~g~~~~k~~a~a~l~aL~~~~~Nr~~iV~a-GAVp~LVeLL~~~-s~~~~E~ALAiL~~La~~~eGr~ 213 (308)
.++|+.|+++|..+....+..+..++.+|+...+||..+++. |+|+.|+++|.+. +.+....|+.+|..|+...+++.
T Consensus 13 ~g~i~~Lv~lL~~~~~~vr~~A~~~L~~La~~~~~~~~i~~~~~~i~~Lv~~L~~~~~~~~~~~A~~~L~~Ls~~~~~~~ 92 (644)
T 2z6h_A 13 TRAIPELTKLLNDEDQVVVNKAAVMVHQLSKKEASRHAIMRSPQMVSAIVRTMQNTNDVETARCTAGTLHNLSHHREGLL 92 (644)
T ss_dssp TTTHHHHHHHHTCSCHHHHHHHHHHHHHHHTSTTHHHHHTTCHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHTTSHHHHH
T ss_pred hchHHHHHHHHcCCCHHHHHHHHHHHHHHHCCChhHHHHHhccChHHHHHHHHhcCCCHHHHHHHHHHHHHHhcChhhHH
Confidence 479999999999665434433446777899988999888865 9999999999865 77889999999999999999999
Q ss_pred HHHhccCcHHHHHHHhcCCCHHHHHHHHHHHHHHhcCCcchhhccCC-ccHHHHHHHHHhCCCCHHHHHHHHHHHHHHHh
Q 044095 214 ETRAHALAVPVMVTMMGQMAGRGKEYAISVLAVIYGGGDQLVVAAPP-EEVARAVELALQGNCTPRGRRKGTQLLKSLKE 292 (308)
Q Consensus 214 aI~~~~gaIp~LV~lLr~gS~~~KE~AVa~L~sLC~~~~~~v~~a~~-~gv~~Ll~Lllqg~cS~raKrKA~~LLklL~~ 292 (308)
.|.+ .|+|+.||++|++.....+++|+.+|.+||....+....+.. +++..|+.++..+ +.+.+..|...|..|..
T Consensus 93 ~i~~-~g~i~~Lv~lL~~~~~~v~~~A~~aL~nL~~~~~~~~~~v~~~g~i~~Lv~lL~~~--~~~~~~~a~~~L~~La~ 169 (644)
T 2z6h_A 93 AIFK-SGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNKT--NVKFLAITTDCLQILAY 169 (644)
T ss_dssp HHHT-TTHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHSTTHHHHHHHTTHHHHHHHGGGCC--CHHHHHHHHHHHHHHHT
T ss_pred HHHH-cCCHHHHHHHHhCCCHHHHHHHHHHHHHHHhCcchhHHHHHHCCChHHHHHHHCcC--CHHHHHHHHHHHHHHHh
Confidence 9998 589999999999999999999999999999876444333443 4467777666555 67777777777777764
No 29
>3tpo_A Importin subunit alpha-2; nuclear import, protein transport; 2.10A {Mus musculus} PDB: 1qgk_B 1qgr_B
Probab=99.21 E-value=2e-11 Score=120.39 Aligned_cols=157 Identities=13% Similarity=0.038 Sum_probs=122.3
Q ss_pred cchHHHHHHHhCCCCC-CCCCcHHHHHHHhcCC-CCcHHHHHHhCcHHHHHHHHhccChhHHHHHHHHHHHHhcC-hhhH
Q 044095 136 LAALYLLERSLLPNPP-SDQACQPELMRALCLA-ESNRRVAVEAGAVGAVIEVVAELDAAAGERALAALELMCTV-AEGA 212 (308)
Q Consensus 136 ~~AI~lLV~LL~~g~~-~~k~~a~a~l~aL~~~-~~Nr~~iV~aGAVp~LVeLL~~~s~~~~E~ALAiL~~La~~-~eGr 212 (308)
.|+|+.||++|..+.. ..+..+..++.+|+.. .+++..++++|+|+.|+++|.+.+.++++.|+.+|.+|+.+ ++.|
T Consensus 118 ~G~ip~Lv~lL~~~~~~~~q~~Aa~aL~nia~~~~~~~~~vv~~Gaip~Lv~LL~s~~~~v~e~A~~aL~nLa~~~~~~r 197 (529)
T 3tpo_A 118 AGLIPKFVSFLGKTDCSPIQFESAWALTNIASGTSEQTKAVVDGGAIPAFISLLASPHAHISEQAVWALGNIAGAGSAFR 197 (529)
T ss_dssp TTHHHHHHHHHTCTTCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHTTCHHHH
T ss_pred CCCHHHHHHHHcCCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHCCCHHHHHHHHcCCCHHHHHHHHHHHHHHhccCHHHH
Confidence 4899999999986542 2333345677888865 56788999999999999999999999999999999999985 6889
Q ss_pred HHHHhccCcHHHHHHHhcCC-----CHHHHHHHHHHHHHHhcCCcchhhc-cCCccHHHHHHHHHhCCCCHHHHHHHHHH
Q 044095 213 EETRAHALAVPVMVTMMGQM-----AGRGKEYAISVLAVIYGGGDQLVVA-APPEEVARAVELALQGNCTPRGRRKGTQL 286 (308)
Q Consensus 213 ~aI~~~~gaIp~LV~lLr~g-----S~~~KE~AVa~L~sLC~~~~~~v~~-a~~~gv~~Ll~Lllqg~cS~raKrKA~~L 286 (308)
..|.+ .|+|+.|+.+|... ....+++|+.+|.++|.+....... ...+.++.|+.++..+ ++..+..|...
T Consensus 198 ~~i~~-~g~i~~Ll~lL~~~~~~~~~~~~~~~a~~~L~nl~~~~~~~~~~~~~~~~lp~L~~LL~~~--~~~v~~~a~~a 274 (529)
T 3tpo_A 198 DLVIK-HGAIDPLLALLAVPDLSTLACGYLRNLTWTLSNLCRNKNPAPPLDAVEQILPTLVRLLHHN--DPEVLADSCWA 274 (529)
T ss_dssp HHHHH-TTCHHHHHHTTCSSCGGGSCHHHHHHHHHHHHHHHCCCTTCCCHHHHHHHHHHHHHHTTSS--CHHHHHHHHHH
T ss_pred HHHHH-cCCcHHHHHHHhccchhHhHHHHHHHHHHHHHHHHhcccchhhHHHHhhHHHHHHHHhcCC--cHHHHHHHHHH
Confidence 99988 68999999999863 3456789999999999976543322 2233356666655555 78899999988
Q ss_pred HHHHHhcCC
Q 044095 287 LKSLKEYGQ 295 (308)
Q Consensus 287 LklL~~~~e 295 (308)
|..|.....
T Consensus 275 L~~l~~~~~ 283 (529)
T 3tpo_A 275 ISYLTDGPN 283 (529)
T ss_dssp HHHHHSSCH
T ss_pred HHHhhhhhh
Confidence 888876543
No 30
>4b8j_A Importin subunit alpha-1A; transport protein, nuclear localization signal; 2.00A {Oryza sativa japonica group} PDB: 4b8o_A 2yns_A 4b8p_A
Probab=99.21 E-value=2.1e-10 Score=111.61 Aligned_cols=175 Identities=14% Similarity=0.103 Sum_probs=134.6
Q ss_pred hHHHHHHHHhHhccCCCC--cccchHHHHHHHhCCCCCCCCCcHHHHHHHhcCCCCcH-HHHHHhCcHHHHHHHHhccCh
Q 044095 116 LQELFHLAELQLSSGSDS--DRLAALYLLERSLLPNPPSDQACQPELMRALCLAESNR-RVAVEAGAVGAVIEVVAELDA 192 (308)
Q Consensus 116 ~~~~f~l~~l~lss~~i~--~~~~AI~lLV~LL~~g~~~~k~~a~a~l~aL~~~~~Nr-~~iV~aGAVp~LVeLL~~~s~ 192 (308)
..++++|+.|..++.... ...++|+.|+++|..+....+..+..++.+|+....++ ..+++.|+|+.|+++|.+.+.
T Consensus 221 ~~a~~~L~~L~~~~~~~~~~~~~~~l~~L~~lL~~~~~~v~~~a~~aL~~l~~~~~~~~~~~~~~g~v~~Lv~lL~~~~~ 300 (528)
T 4b8j_A 221 RNATWTLSNFCRGKPQPSFEQTRPALPALARLIHSNDEEVLTDACWALSYLSDGTNDKIQAVIEAGVCPRLVELLLHPSP 300 (528)
T ss_dssp HHHHHHHHHHHCSSSCCCHHHHTTHHHHHHHHTTCCCHHHHHHHHHHHHHHTSSCHHHHHHHHHTTCHHHHHHHTTCSCH
T ss_pred HHHHHHHHHHHcCCCCCcHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHcCHHHHHHHHHcCCCh
Confidence 456677777766542211 22479999999998765333322335666788665554 577889999999999998889
Q ss_pred hHHHHHHHHHHHHhc-ChhhHHHHHhccCcHHHHHHHhcCC-CHHHHHHHHHHHHHHhcCCcchhhccCCcc-HHHHHHH
Q 044095 193 AAGERALAALELMCT-VAEGAEETRAHALAVPVMVTMMGQM-AGRGKEYAISVLAVIYGGGDQLVVAAPPEE-VARAVEL 269 (308)
Q Consensus 193 ~~~E~ALAiL~~La~-~~eGr~aI~~~~gaIp~LV~lLr~g-S~~~KE~AVa~L~sLC~~~~~~v~~a~~~g-v~~Ll~L 269 (308)
...+.|+.+|.+|+. .++.+..+.+ .|+|+.|+++|... ...-++.|+.+|.+|+.+..+.+......| ++.|+.+
T Consensus 301 ~v~~~a~~~L~nl~~~~~~~~~~~~~-~~~l~~L~~lL~~~~~~~v~~~A~~~L~nl~~~~~~~~~~~~~~~~i~~L~~l 379 (528)
T 4b8j_A 301 SVLIPALRTVGNIVTGDDAQTQCIID-HQALPCLLSLLTQNLKKSIKKEACWTISNITAGNKDQIQAVINAGIIGPLVNL 379 (528)
T ss_dssp HHHHHHHHHHHHHTTSCHHHHHHHHT-TTHHHHHHHHHHSCCCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTCHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHH-hhhHHHHHHHHcCCCcHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHH
Confidence 999999999999998 4667777777 78999999999998 999999999999999986654443334444 6778777
Q ss_pred HHhCCCCHHHHHHHHHHHHHHHhc
Q 044095 270 ALQGNCTPRGRRKGTQLLKSLKEY 293 (308)
Q Consensus 270 llqg~cS~raKrKA~~LLklL~~~ 293 (308)
+..+ +.+.|+.|...|..|...
T Consensus 380 L~~~--~~~v~~~a~~aL~nl~~~ 401 (528)
T 4b8j_A 380 LQTA--EFDIKKEAAWAISNATSG 401 (528)
T ss_dssp HHHS--CHHHHHHHHHHHHHHHHH
T ss_pred HhcC--CHHHHHHHHHHHHHHHcC
Confidence 7766 899999999998888765
No 31
>2z6g_A B-catenin; FULL-length, beta-catenin, cell adhesion; 3.40A {Danio rerio}
Probab=99.17 E-value=5.6e-11 Score=123.51 Aligned_cols=159 Identities=11% Similarity=0.088 Sum_probs=125.4
Q ss_pred cchHHHHHHHhCCCC-CCCCCcHHHHHHHhcCCCCcHHHHHHhCcHHHHHHHHhccChhHHHHHHHHHHHHhcC-hhhHH
Q 044095 136 LAALYLLERSLLPNP-PSDQACQPELMRALCLAESNRRVAVEAGAVGAVIEVVAELDAAAGERALAALELMCTV-AEGAE 213 (308)
Q Consensus 136 ~~AI~lLV~LL~~g~-~~~k~~a~a~l~aL~~~~~Nr~~iV~aGAVp~LVeLL~~~s~~~~E~ALAiL~~La~~-~eGr~ 213 (308)
.++|+.|+++|+.+. ...+..+..++++|+...+|+..+++.|+|+.|+++|.+.+..+++.|+.+|.+|+.. ++.+.
T Consensus 191 ~~~i~~Lv~~L~~~~d~~vr~~Aa~aL~~Ls~~~~~~~~i~~~g~I~~Lv~lL~~~~~~v~~~A~~aL~nLa~~~~~~~~ 270 (780)
T 2z6g_A 191 PQMVSAIVRTMQNTNDVETARCTSGTLHNLSHHREGLLAIFKSGGIPALVNMLGSPVDSVLFHAITTLHNLLLHQEGAKM 270 (780)
T ss_dssp HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHTSHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHSTTHHH
T ss_pred cChHHHHHHHHcCCCCHHHHHHHHHHHHHHhCCchhHHHHHHcCCHHHHHHHHcCCCHHHHHHHHHHHHHHhCCChhhHH
Confidence 479999999998653 2233334567788999899999999999999999999988899999999999999987 46676
Q ss_pred HHHhccCcHHHHHHHhcCCCHHHHHHHHHHHHHHhcCCcchhhc-cCCccHHHHHHHHHhCCCCHHHHHHHHHHHHHHHh
Q 044095 214 ETRAHALAVPVMVTMMGQMAGRGKEYAISVLAVIYGGGDQLVVA-APPEEVARAVELALQGNCTPRGRRKGTQLLKSLKE 292 (308)
Q Consensus 214 aI~~~~gaIp~LV~lLr~gS~~~KE~AVa~L~sLC~~~~~~v~~-a~~~gv~~Ll~Lllqg~cS~raKrKA~~LLklL~~ 292 (308)
.+.+ .|+|+.||++|.+.+.+.++.|+.+|..|+..+.+.... +..+++..|+.++..+ .....++.|..+|..|..
T Consensus 271 ~v~~-~g~v~~Lv~lL~~~~~~v~~~a~~aL~~La~~~~e~~~~i~~~~~i~~Lv~lL~~~-~~~~~~~~a~~aL~~Ls~ 348 (780)
T 2z6g_A 271 AVRL-AGGLQKMVALLNKTNVKFLAITTDCLQILAYGNQESKLIILASGGPQALVNIMRTY-TYEKLLWTTSRVLKVLSV 348 (780)
T ss_dssp HHHH-TTHHHHHHHGGGCCCHHHHHHHHHHHHHHHTTCHHHHHHHHTTTHHHHHHHHHTTC-CCHHHHHHHHHHHHHHHT
T ss_pred HHHH-cCCHHHHHHHHhcCCHHHHHHHHHHHHHHhcCChHHHHHHHHcCCHHHHHHHHhcC-CHHHHHHHHHHHHHHhhc
Confidence 7766 689999999999988899999999999999865433322 3345567777766655 245566778899998887
Q ss_pred cCCC
Q 044095 293 YGQP 296 (308)
Q Consensus 293 ~~e~ 296 (308)
+.++
T Consensus 349 ~~~~ 352 (780)
T 2z6g_A 349 CSSN 352 (780)
T ss_dssp STTH
T ss_pred ChHH
Confidence 6554
No 32
>2jdq_A Importin alpha-1 subunit; transport, PB2 subunit, nuclear protein, protein transport, armadillo repeats; 2.2A {Homo sapiens} PDB: 3tj3_A
Probab=99.14 E-value=8.7e-10 Score=103.30 Aligned_cols=176 Identities=13% Similarity=0.096 Sum_probs=132.8
Q ss_pred ChHHHHHHHHhHhccC-C--CCcccchHHHHHHHhCCCCCCCCCcHHHHHHHhcCC-CCcHHHHHHhCcHHHHHHHHhcc
Q 044095 115 SLQELFHLAELQLSSG-S--DSDRLAALYLLERSLLPNPPSDQACQPELMRALCLA-ESNRRVAVEAGAVGAVIEVVAEL 190 (308)
Q Consensus 115 ~~~~~f~l~~l~lss~-~--i~~~~~AI~lLV~LL~~g~~~~k~~a~a~l~aL~~~-~~Nr~~iV~aGAVp~LVeLL~~~ 190 (308)
...++++|+.|...+. . .....++|+.|+++|..+....+..+..++++|+.. .+++..+++.|+|+.|+++|.+.
T Consensus 167 ~~~a~~~L~~l~~~~~~~~~~~~~~~~l~~L~~~l~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~ll~~~ 246 (450)
T 2jdq_A 167 TRNAVWALSNLCRGKSPPPEFAKVSPCLNVLSWLLFVSDTDVLADACWALSYLSDGPNDKIQAVIDAGVCRRLVELLMHN 246 (450)
T ss_dssp HHHHHHHHHHHHCCSSSCCCGGGTGGGHHHHHHHTTCCCHHHHHHHHHHHHHHTSSSHHHHHHHHHTTTHHHHHHHTTCS
T ss_pred HHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHCCCcHHHHHHHHcCcHHHHHHHHCCC
Confidence 4567778887775441 1 112258999999999865432222233566788865 46788889999999999999988
Q ss_pred ChhHHHHHHHHHHHHhcChh-hHHHHHhccCcHHHHHHHhcCCCHHHHHHHHHHHHHHhcCCcchhhccCCcc-HHHHHH
Q 044095 191 DAAAGERALAALELMCTVAE-GAEETRAHALAVPVMVTMMGQMAGRGKEYAISVLAVIYGGGDQLVVAAPPEE-VARAVE 268 (308)
Q Consensus 191 s~~~~E~ALAiL~~La~~~e-Gr~aI~~~~gaIp~LV~lLr~gS~~~KE~AVa~L~sLC~~~~~~v~~a~~~g-v~~Ll~ 268 (308)
+....+.|+.+|.+|+...+ .+..+.+ .|+|+.|+++|.+.+..-|+.|+.+|.+|+.+..+....+...| +..++.
T Consensus 247 ~~~v~~~a~~~L~~l~~~~~~~~~~~~~-~~~l~~L~~ll~~~~~~vr~~a~~~L~~l~~~~~~~~~~~~~~~~l~~L~~ 325 (450)
T 2jdq_A 247 DYKVVSPALRAVGNIVTGDDIQTQVILN-CSALQSLLHLLSSPKESIKKEACWTISNITAGNRAQIQTVIDANIFPALIS 325 (450)
T ss_dssp CHHHHHHHHHHHHHHTTSCHHHHHHHHT-TTHHHHHHHHTTCSSHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHH
T ss_pred chhHHHHHHHHHHHHhhCChHHHHHHHH-CccHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHCCCHHHHHH
Confidence 89999999999999998654 4455655 68999999999999999999999999999986654433334344 567777
Q ss_pred HHHhCCCCHHHHHHHHHHHHHHHhc
Q 044095 269 LALQGNCTPRGRRKGTQLLKSLKEY 293 (308)
Q Consensus 269 Lllqg~cS~raKrKA~~LLklL~~~ 293 (308)
++..+ +.+.|+.|...|..|...
T Consensus 326 ~l~~~--~~~v~~~a~~~L~~l~~~ 348 (450)
T 2jdq_A 326 ILQTA--EFRTRKEAAWAITNATSG 348 (450)
T ss_dssp HHHHS--CHHHHHHHHHHHHHHHHH
T ss_pred HHhcC--CHHHHHHHHHHHHHHHcC
Confidence 77666 889999999888887654
No 33
>1xqr_A HSPBP1 protein; armadillo repeat, superhelical twist, chaperone; 2.10A {Homo sapiens} SCOP: a.118.1.21 PDB: 1xqs_A*
Probab=99.14 E-value=1.6e-10 Score=108.23 Aligned_cols=132 Identities=13% Similarity=0.066 Sum_probs=110.2
Q ss_pred HHHHHhcCCCCcHHHHHHhCcHHHHHH-HHhccChhHHHHHHHHHHHHhcC-hhhHHHHHhccCcHHHHHHHhcCC-CHH
Q 044095 159 ELMRALCLAESNRRVAVEAGAVGAVIE-VVAELDAAAGERALAALELMCTV-AEGAEETRAHALAVPVMVTMMGQM-AGR 235 (308)
Q Consensus 159 a~l~aL~~~~~Nr~~iV~aGAVp~LVe-LL~~~s~~~~E~ALAiL~~La~~-~eGr~aI~~~~gaIp~LV~lLr~g-S~~ 235 (308)
..+..|+...+|...+++.|+|+.||+ +|.+.+.+.++.|+.+|.+++.. ++.+..|.+ .|+|+.|+++|+.. +..
T Consensus 62 ~~L~~lv~~~dna~~~~~~G~l~~Lv~~lL~s~~~~vr~~Aa~~Lg~ia~~n~~~~~~vv~-~g~l~~Ll~LL~~~~~~~ 140 (296)
T 1xqr_A 62 ELLADLCENMDNAADFCQLSGMHLLVGRYLEAGAAGLRWRAAQLIGTCSQNVAAIQEQVLG-LGALRKLLRLLDRDACDT 140 (296)
T ss_dssp HHHHHHHTSHHHHHHHHHTTHHHHHHHTTTTCSSHHHHHHHHHHHHHHHTTCHHHHHHHHH-TTHHHHHHHHHHHCSCHH
T ss_pred HHHHHHHhChhhHHHHHHcCCHHHHHHHHHcCCCHHHHHHHHHHHHHHHhCCHHHHHHHHH-CCCHHHHHHHHccCCCHH
Confidence 445567777789999999999999999 99988999999999999999985 678888888 68999999999964 788
Q ss_pred HHHHHHHHHHHHhcCCcchhhccC-CccHHHHHHHHHhCCCCHHHHHHHHHHHHHHHhc
Q 044095 236 GKEYAISVLAVIYGGGDQLVVAAP-PEEVARAVELALQGNCTPRGRRKGTQLLKSLKEY 293 (308)
Q Consensus 236 ~KE~AVa~L~sLC~~~~~~v~~a~-~~gv~~Ll~Lllqg~cS~raKrKA~~LLklL~~~ 293 (308)
.++.|+.+|.+||.+.......+. .+|++.|+.++..+ +.+.|++|..+|..|...
T Consensus 141 v~~~A~~ALsnl~~~~~~~~~~~~~~ggi~~L~~lL~~~--d~~v~~~A~~aLs~L~~~ 197 (296)
T 1xqr_A 141 VRVKALFAISCLVREQEAGLLQFLRLDGFSVLMRAMQQQ--VQKLKVKSAFLLQNLLVG 197 (296)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHHSS--CHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCcHHHHHHHHCCCHHHHHHHHcCC--CHHHHHHHHHHHHHHHhC
Confidence 999999999999987754332222 45677887777666 899999999999988765
No 34
>2jdq_A Importin alpha-1 subunit; transport, PB2 subunit, nuclear protein, protein transport, armadillo repeats; 2.2A {Homo sapiens} PDB: 3tj3_A
Probab=99.13 E-value=4.7e-10 Score=105.11 Aligned_cols=154 Identities=14% Similarity=0.042 Sum_probs=122.4
Q ss_pred chHHHHHHHhCCC-CCCCCCcHHHHHHHhcCC-CCcHHHHHHhCcHHHHHHHHhccChhHHHHHHHHHHHHhcC-hhhHH
Q 044095 137 AALYLLERSLLPN-PPSDQACQPELMRALCLA-ESNRRVAVEAGAVGAVIEVVAELDAAAGERALAALELMCTV-AEGAE 213 (308)
Q Consensus 137 ~AI~lLV~LL~~g-~~~~k~~a~a~l~aL~~~-~~Nr~~iV~aGAVp~LVeLL~~~s~~~~E~ALAiL~~La~~-~eGr~ 213 (308)
+.++.|+++|..+ ....+..+..++.+|+.. .+++..+++.|+|+.|+++|.+.+.+..+.|+.+|.+|+.. ++.+.
T Consensus 64 ~~i~~L~~~L~~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~lL~~~~~~vr~~a~~~L~~l~~~~~~~~~ 143 (450)
T 2jdq_A 64 GVVARFVEFLKRKENCTLQFESAWVLTNIASGNSLQTRIVIQAGAVPIFIELLSSEFEDVQEQAVWALGNIAGDSTMCRD 143 (450)
T ss_dssp THHHHHHHHHTCTTCHHHHHHHHHHHHHHHSSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred CcHHHHHHHHCCCCCHHHHHHHHHHHHHHhcCCHHHHHHHHhCCCHHHHHHHHcCCCHHHHHHHHHHHHHHccCCHHHHH
Confidence 7899999999877 333333344677778764 57788889999999999999988899999999999999986 47888
Q ss_pred HHHhccCcHHHHHHHhcC-CCHHHHHHHHHHHHHHhcCC-cchhhccCCccHHHHHHHHHhCCCCHHHHHHHHHHHHHHH
Q 044095 214 ETRAHALAVPVMVTMMGQ-MAGRGKEYAISVLAVIYGGG-DQLVVAAPPEEVARAVELALQGNCTPRGRRKGTQLLKSLK 291 (308)
Q Consensus 214 aI~~~~gaIp~LV~lLr~-gS~~~KE~AVa~L~sLC~~~-~~~v~~a~~~gv~~Ll~Lllqg~cS~raKrKA~~LLklL~ 291 (308)
.+.+ .|+|+.|+++|.+ .+..-++.|+.+|.+||.+. .........+.++.++.++..+ +...++.|...|..|.
T Consensus 144 ~~~~-~~~i~~L~~~l~~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~l~~L~~~l~~~--~~~v~~~a~~~L~~l~ 220 (450)
T 2jdq_A 144 YVLD-CNILPPLLQLFSKQNRLTMTRNAVWALSNLCRGKSPPPEFAKVSPCLNVLSWLLFVS--DTDVLADACWALSYLS 220 (450)
T ss_dssp HHHH-TTCHHHHHHHTTSCCCHHHHHHHHHHHHHHHCCSSSCCCGGGTGGGHHHHHHHTTCC--CHHHHHHHHHHHHHHT
T ss_pred HHHH-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHccC--CHHHHHHHHHHHHHHH
Confidence 8877 6899999999996 68999999999999999865 2222223445567777666554 7888899998888887
Q ss_pred hc
Q 044095 292 EY 293 (308)
Q Consensus 292 ~~ 293 (308)
..
T Consensus 221 ~~ 222 (450)
T 2jdq_A 221 DG 222 (450)
T ss_dssp SS
T ss_pred CC
Confidence 64
No 35
>1wa5_B Importin alpha subunit; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1un0_A 2c1t_A 1bk5_A 1ee5_A 1bk6_A 1ee4_A
Probab=99.10 E-value=4.7e-10 Score=109.51 Aligned_cols=155 Identities=14% Similarity=0.046 Sum_probs=123.4
Q ss_pred cchHHHHHHHhCCC-CCCCCCcHHHHHHHhcCC-CCcHHHHHHhCcHHHHHHHHhccChhHHHHHHHHHHHHhcC-hhhH
Q 044095 136 LAALYLLERSLLPN-PPSDQACQPELMRALCLA-ESNRRVAVEAGAVGAVIEVVAELDAAAGERALAALELMCTV-AEGA 212 (308)
Q Consensus 136 ~~AI~lLV~LL~~g-~~~~k~~a~a~l~aL~~~-~~Nr~~iV~aGAVp~LVeLL~~~s~~~~E~ALAiL~~La~~-~eGr 212 (308)
.++|+.|+++|..+ ...-+..+..++.+|+.. .+++..+++.|+|+.|+++|.+.+..+.+.|+.+|.+|+.. ++.+
T Consensus 129 ~g~i~~Lv~~L~~~~~~~v~~~A~~~L~~l~~~~~~~~~~~~~~g~i~~Lv~lL~~~~~~vr~~A~~aL~~l~~~~~~~~ 208 (530)
T 1wa5_B 129 AGVVPRLVEFMRENQPEMLQLEAAWALTNIASGTSAQTKVVVDADAVPLFIQLLYTGSVEVKEQAIWALGNVAGDSTDYR 208 (530)
T ss_dssp TTCHHHHHHTTSTTSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTCHHHHHHHHHHCCHHHHHHHHHHHHHHHTTCHHHH
T ss_pred CCCHHHHHHHhCCCCCHHHHHHHHHHHHHHhCCCHHHHHHHHHCCCHHHHHHHHcCCCHHHHHHHHHHHHHHhCCCccch
Confidence 47999999999876 333333344567788865 56888899999999999999988899999999999999986 6788
Q ss_pred HHHHhccCcHHHHHHHhcCCCHHHHHHHHHHHHHHhcCC-cchhhccCCccHHHHHHHHHhCCCCHHHHHHHHHHHHHHH
Q 044095 213 EETRAHALAVPVMVTMMGQMAGRGKEYAISVLAVIYGGG-DQLVVAAPPEEVARAVELALQGNCTPRGRRKGTQLLKSLK 291 (308)
Q Consensus 213 ~aI~~~~gaIp~LV~lLr~gS~~~KE~AVa~L~sLC~~~-~~~v~~a~~~gv~~Ll~Lllqg~cS~raKrKA~~LLklL~ 291 (308)
..+.. .|+|+.|+++|.+.....+++|+.+|.+||.+. .........+.+..|+.++..+ +...+..|...|..|.
T Consensus 209 ~~~~~-~~~l~~L~~ll~~~~~~v~~~a~~~L~~L~~~~~~~~~~~~~~~~l~~L~~lL~~~--d~~v~~~a~~~L~~L~ 285 (530)
T 1wa5_B 209 DYVLQ-CNAMEPILGLFNSNKPSLIRTATWTLSNLCRGKKPQPDWSVVSQALPTLAKLIYSM--DTETLVDACWAISYLS 285 (530)
T ss_dssp HHHHH-TTCHHHHHHGGGSCCHHHHHHHHHHHHHHHCCSSSCCCHHHHGGGHHHHHHHTTCC--CHHHHHHHHHHHHHHH
T ss_pred HHHHH-cCcHHHHHHHhccCCHHHHHHHHHHHHHHhCCCCCCCcHHHHHhHHHHHHHHHcCC--CHHHHHHHHHHHHHHh
Confidence 88877 689999999999988999999999999999876 2222223344466776655544 7888999999998887
Q ss_pred hc
Q 044095 292 EY 293 (308)
Q Consensus 292 ~~ 293 (308)
..
T Consensus 286 ~~ 287 (530)
T 1wa5_B 286 DG 287 (530)
T ss_dssp SS
T ss_pred CC
Confidence 54
No 36
>1wa5_B Importin alpha subunit; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1un0_A 2c1t_A 1bk5_A 1ee5_A 1bk6_A 1ee4_A
Probab=99.04 E-value=2.2e-09 Score=104.76 Aligned_cols=175 Identities=11% Similarity=0.053 Sum_probs=132.7
Q ss_pred hHHHHHHHHhHhccC-CCC--cccchHHHHHHHhCCCCCCCCCcHHHHHHHhcCC-CCcHHHHHHhCcHHHHHHHHhccC
Q 044095 116 LQELFHLAELQLSSG-SDS--DRLAALYLLERSLLPNPPSDQACQPELMRALCLA-ESNRRVAVEAGAVGAVIEVVAELD 191 (308)
Q Consensus 116 ~~~~f~l~~l~lss~-~i~--~~~~AI~lLV~LL~~g~~~~k~~a~a~l~aL~~~-~~Nr~~iV~aGAVp~LVeLL~~~s 191 (308)
..++++|+.|...+. ... ...++++.|+++|..+....+..+..++.+|+.. .+++..+++.|+|+.|+++|.+.+
T Consensus 233 ~~a~~~L~~L~~~~~~~~~~~~~~~~l~~L~~lL~~~d~~v~~~a~~~L~~L~~~~~~~~~~~~~~~~v~~Lv~lL~~~~ 312 (530)
T 1wa5_B 233 RTATWTLSNLCRGKKPQPDWSVVSQALPTLAKLIYSMDTETLVDACWAISYLSDGPQEAIQAVIDVRIPKRLVELLSHES 312 (530)
T ss_dssp HHHHHHHHHHHCCSSSCCCHHHHGGGHHHHHHHTTCCCHHHHHHHHHHHHHHHSSCHHHHHHHHHTTCHHHHHHGGGCSC
T ss_pred HHHHHHHHHHhCCCCCCCcHHHHHhHHHHHHHHHcCCCHHHHHHHHHHHHHHhCCCHHHHHHHHhcCcHHHHHHHHCCCC
Confidence 456777777776542 211 2247999999999865432222233566677755 456788899999999999999888
Q ss_pred hhHHHHHHHHHHHHhcC-hhhHHHHHhccCcHHHHHHHhcCCCHHHHHHHHHHHHHHhcCCcchhhccCCcc-HHHHHHH
Q 044095 192 AAAGERALAALELMCTV-AEGAEETRAHALAVPVMVTMMGQMAGRGKEYAISVLAVIYGGGDQLVVAAPPEE-VARAVEL 269 (308)
Q Consensus 192 ~~~~E~ALAiL~~La~~-~eGr~aI~~~~gaIp~LV~lLr~gS~~~KE~AVa~L~sLC~~~~~~v~~a~~~g-v~~Ll~L 269 (308)
....+.|+.+|.+|+.. ++....+.+ .|+++.|+++|......-++.|+.+|.+|+.++.+.+...+..| +..|+.+
T Consensus 313 ~~v~~~a~~~L~~l~~~~~~~~~~~~~-~~~l~~L~~lL~~~~~~vr~~A~~aL~~l~~~~~~~~~~~~~~~~l~~L~~l 391 (530)
T 1wa5_B 313 TLVQTPALRAVGNIVTGNDLQTQVVIN-AGVLPALRLLLSSPKENIKKEACWTISNITAGNTEQIQAVIDANLIPPLVKL 391 (530)
T ss_dssp HHHHHHHHHHHHHHTTSCHHHHHHHHH-TTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTCHHHHHHH
T ss_pred hhhHHHHHHHHHHHHcCCHHHHHHHHH-cchHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHCCCHHHHHHH
Confidence 99999999999999975 566666666 68999999999999999999999999999986654443333344 6777777
Q ss_pred HHhCCCCHHHHHHHHHHHHHHHhc
Q 044095 270 ALQGNCTPRGRRKGTQLLKSLKEY 293 (308)
Q Consensus 270 llqg~cS~raKrKA~~LLklL~~~ 293 (308)
+..+ +.+.|+.|...|..|...
T Consensus 392 L~~~--~~~v~~~a~~aL~~l~~~ 413 (530)
T 1wa5_B 392 LEVA--EYKTKKEACWAISNASSG 413 (530)
T ss_dssp HHHS--CHHHHHHHHHHHHHHHHH
T ss_pred HhcC--CHHHHHHHHHHHHHHHhc
Confidence 7666 899999999888888765
No 37
>3opb_A SWI5-dependent HO expression protein 4; heat and arm fold, myosin folding and function, myosin bindi protein, protein binding; 2.90A {Saccharomyces cerevisiae}
Probab=99.02 E-value=4.2e-10 Score=118.05 Aligned_cols=159 Identities=12% Similarity=0.079 Sum_probs=121.9
Q ss_pred cchHHHHHHHhCCCCCCCCCcHHHHHHHhcCCCCcHHHHHHhCcHHHHHHHHhccChh---HHHHHHHHHHHHhcChhhH
Q 044095 136 LAALYLLERSLLPNPPSDQACQPELMRALCLAESNRRVAVEAGAVGAVIEVVAELDAA---AGERALAALELMCTVAEGA 212 (308)
Q Consensus 136 ~~AI~lLV~LL~~g~~~~k~~a~a~l~aL~~~~~Nr~~iV~aGAVp~LVeLL~~~s~~---~~E~ALAiL~~La~~~eGr 212 (308)
.|+|+.|+.+++.+....+..+..++.+|+.+.+||..+++.|+++.|+++|.+++.. ..+.|+.+|++|....+-.
T Consensus 456 aGvIp~Lv~Ll~S~s~~~re~A~~aL~nLS~d~~~R~~lvqqGal~~LL~lL~s~~~~~~~~k~~AA~ALArLlis~np~ 535 (778)
T 3opb_A 456 TELISFLKREMHNLSPNCKQQVVRIIYNITRSKNFIPQLAQQGAVKIILEYLANKQDIGEPIRILGCRALTRMLIFTNPG 535 (778)
T ss_dssp TTHHHHHHHHGGGSCHHHHHHHHHHHHHHHTSGGGHHHHHHTTHHHHHHHHTTCC---CCHHHHHHHHHHHHHHHTSCHH
T ss_pred CcCHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHHHHHHHCCCHHHHHHHHhcCCCcchHHHHHHHHHHHHHHhcCCHH
Confidence 4899999999988765555445578889999999999999999999999999876543 7889999999999766655
Q ss_pred HHHHh--ccCcHHHHHHHhcC--CCH------------HHHHHHHHHHHHHhcCCcc---h-hhccCCc-c-HHHHHHHH
Q 044095 213 EETRA--HALAVPVMVTMMGQ--MAG------------RGKEYAISVLAVIYGGGDQ---L-VVAAPPE-E-VARAVELA 270 (308)
Q Consensus 213 ~aI~~--~~gaIp~LV~lLr~--gS~------------~~KE~AVa~L~sLC~~~~~---~-v~~a~~~-g-v~~Ll~Ll 270 (308)
..+.. .-++|+.||++|.. ++. ..+-.|+.+|.+|+...++ . ...++.+ | +..+..++
T Consensus 536 ~~f~~~~~~~aI~pLv~LL~~~~~~~~~~l~~~~~~~~l~~feAL~ALTNLAs~~~n~~E~~r~~Ii~~~ga~~~L~~LL 615 (778)
T 3opb_A 536 LIFKKYSALNAIPFLFELLPRSTPVDDNPLHNDEQIKLTDNYEALLALTNLASSETSDGEEVCKHIVSTKVYWSTIENLM 615 (778)
T ss_dssp HHSSSSCSTTHHHHHHHTSCCSSSCSSCC---CCCCCHHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHSHHHHHHHHHGG
T ss_pred HHcCCCccccchHHHHHHcCCCCCcccccccccccccHHHHHHHHHHHHHHhcCCcccchHHHHHHHHhcCHHHHHHHHH
Confidence 55532 23899999999983 221 4588999999999998632 1 2234443 4 56776666
Q ss_pred HhCCCCHHHHHHHHHHHHHHHhcCCC
Q 044095 271 LQGNCTPRGRRKGTQLLKSLKEYGQP 296 (308)
Q Consensus 271 lqg~cS~raKrKA~~LLklL~~~~e~ 296 (308)
.+. +...|+.|.+++-.|..+.+.
T Consensus 616 ~s~--n~~VrrAA~elI~NL~~~~e~ 639 (778)
T 3opb_A 616 LDE--NVPLQRSTLELISNMMSHPLT 639 (778)
T ss_dssp GCS--SHHHHHHHHHHHHHHHTSGGG
T ss_pred hCC--CHHHHHHHHHHHHHHhCCcHH
Confidence 655 889999999999999986654
No 38
>3opb_A SWI5-dependent HO expression protein 4; heat and arm fold, myosin folding and function, myosin bindi protein, protein binding; 2.90A {Saccharomyces cerevisiae}
Probab=98.95 E-value=5.6e-09 Score=109.59 Aligned_cols=179 Identities=12% Similarity=0.039 Sum_probs=132.8
Q ss_pred ChHHHHHHHHhHhccCC---CC--cccchHHHHHHHhCCCCCCC--------------CCcHHHHHHHhcCCCCc-----
Q 044095 115 SLQELFHLAELQLSSGS---DS--DRLAALYLLERSLLPNPPSD--------------QACQPELMRALCLAESN----- 170 (308)
Q Consensus 115 ~~~~~f~l~~l~lss~~---i~--~~~~AI~lLV~LL~~g~~~~--------------k~~a~a~l~aL~~~~~N----- 170 (308)
+..+..+|+.+..+... ++ ...+||++|++||..+.... +..+.-++.||+..++|
T Consensus 518 k~~AA~ALArLlis~np~~~f~~~~~~~aI~pLv~LL~~~~~~~~~~l~~~~~~~~l~~feAL~ALTNLAs~~~n~~E~~ 597 (778)
T 3opb_A 518 RILGCRALTRMLIFTNPGLIFKKYSALNAIPFLFELLPRSTPVDDNPLHNDEQIKLTDNYEALLALTNLASSETSDGEEV 597 (778)
T ss_dssp HHHHHHHHHHHHHTSCHHHHSSSSCSTTHHHHHHHTSCCSSSCSSCC---CCCCCHHHHHHHHHHHHHHHHCCSHHHHHH
T ss_pred HHHHHHHHHHHHhcCCHHHHcCCCccccchHHHHHHcCCCCCcccccccccccccHHHHHHHHHHHHHHhcCCcccchHH
Confidence 46677888887765431 22 22499999999998543221 11122355589988755
Q ss_pred HHHHHHh-CcHHHHHHHHhccChhHHHHHHHHHHHHhcChhhH-HHHHhcc-----CcHHHHHHHhcCCCHHHHHHHHHH
Q 044095 171 RRVAVEA-GAVGAVIEVVAELDAAAGERALAALELMCTVAEGA-EETRAHA-----LAVPVMVTMMGQMAGRGKEYAISV 243 (308)
Q Consensus 171 r~~iV~a-GAVp~LVeLL~~~s~~~~E~ALAiL~~La~~~eGr-~aI~~~~-----gaIp~LV~lLr~gS~~~KE~AVa~ 243 (308)
|.+|++. |+++.|+++|.+.+..+...|+.+|.+|+.+++++ ..+.+.. +.+..||.+++....+.|+.|.++
T Consensus 598 r~~Ii~~~ga~~~L~~LL~s~n~~VrrAA~elI~NL~~~~e~i~~k~~~~~~~~~~~rL~lLV~Ll~s~D~~~r~AAagA 677 (778)
T 3opb_A 598 CKHIVSTKVYWSTIENLMLDENVPLQRSTLELISNMMSHPLTIAAKFFNLENPQSLRNFNILVKLLQLSDVESQRAVAAI 677 (778)
T ss_dssp HHHHHHSHHHHHHHHHGGGCSSHHHHHHHHHHHHHHHTSGGGTGGGTSCCSSHHHHHHHHHHHHGGGCSCHHHHHHHHHH
T ss_pred HHHHHHhcCHHHHHHHHHhCCCHHHHHHHHHHHHHHhCCcHHHHHHHHhhcCchhhccHHHHHHHHcCCCHHHHHHHHHH
Confidence 8899996 99999999999888889999999999999999986 3564322 238899999999999999999999
Q ss_pred HHHHhcCCcchhhccCC--ccHHHHHHHHHhCCCCHHHHHHHHHHHHHHHhc
Q 044095 244 LAVIYGGGDQLVVAAPP--EEVARAVELALQGNCTPRGRRKGTQLLKSLKEY 293 (308)
Q Consensus 244 L~sLC~~~~~~v~~a~~--~gv~~Ll~Lllqg~cS~raKrKA~~LLklL~~~ 293 (308)
|.+++..+...+..++. +|+..++.++.........+.++..+|..|.+.
T Consensus 678 LAnLts~~~~ia~~ll~~~~gi~~Ll~lL~~~~~~~~l~~R~~~~l~NL~~~ 729 (778)
T 3opb_A 678 FANIATTIPLIAKELLTKKELIENAIQVFADQIDDIELRQRLLMLFFGLFEV 729 (778)
T ss_dssp HHHHHHHCHHHHHHHTTCHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTT
T ss_pred HHHhcCCChHHHHHHHHccccHHHHHHHHhccCCCHHHHHHHHHHHHHHHHh
Confidence 99997655433333333 467777776665212899999999999988863
No 39
>4gmo_A Putative uncharacterized protein; ARM, heat, solenoid, nuclear transport, chaperone, RPL5, RPL KAP104, nucleus; 2.10A {Chaetomium thermophilum var} PDB: 4gmn_A
Probab=98.24 E-value=2.4e-06 Score=87.60 Aligned_cols=156 Identities=8% Similarity=0.077 Sum_probs=112.9
Q ss_pred chHHHHHHHhCCCCCCCCCcHHHHHHHhcCCCCcHHHHHHhCcHHHHHH-HHhccChhHHHHHHHHHHHHhcC--hhhHH
Q 044095 137 AALYLLERSLLPNPPSDQACQPELMRALCLAESNRRVAVEAGAVGAVIE-VVAELDAAAGERALAALELMCTV--AEGAE 213 (308)
Q Consensus 137 ~AI~lLV~LL~~g~~~~k~~a~a~l~aL~~~~~Nr~~iV~aGAVp~LVe-LL~~~s~~~~E~ALAiL~~La~~--~eGr~ 213 (308)
+.|.+|++.|+......|..+..++++|+....+|..+++.|+|..++. +|.|.+.++++.|+.+|.+|+.+ .+-+.
T Consensus 34 ~~i~Pll~~L~S~~~~~r~~A~~al~~l~~~~~~~~l~~~~~~v~~ll~~lL~D~~~~Vr~~A~gaLrnL~~~~g~d~~~ 113 (684)
T 4gmo_A 34 DKILPVLKDLKSPDAKSRTTAAGAIANIVQDAKCRKLLLREQVVHIVLTETLTDNNIDSRAAGWEILKVLAQEEEADFCV 113 (684)
T ss_dssp HTTHHHHHHHSSSCCSHHHHHHHHHHHHTTSHHHHHHHHHTTHHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHSCHHHHH
T ss_pred hhHHHHHHHcCCCCHHHHHHHHHHHHHHHcCcHHHHHHHHcCCHHHHHHHHcCCCCHHHHHHHHHHHHHHHhhcCchHHH
Confidence 4556666778866655665555788899988889999999999987655 68888999999999999999975 35566
Q ss_pred HHHhccCcHHHHHHHhcCCCH---------------------HHHHHHHHHHHHHhcCCcchhhccC-CccHHHHHHHHH
Q 044095 214 ETRAHALAVPVMVTMMGQMAG---------------------RGKEYAISVLAVIYGGGDQLVVAAP-PEEVARAVELAL 271 (308)
Q Consensus 214 aI~~~~gaIp~LV~lLr~gS~---------------------~~KE~AVa~L~sLC~~~~~~v~~a~-~~gv~~Ll~Lll 271 (308)
.+.+ .+.++.|..+|+.... .-.++++.+||+||..+.+.+..+. .+++..++.++.
T Consensus 114 ~l~~-~~il~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lL~~L~e~s~~~~~~v~~~~~l~~l~~~L~ 192 (684)
T 4gmo_A 114 HLYR-LDVLTAIEHAAKAVLETLTTSEPPFSKLLKAQQRLVWDITGSLLVLIGLLALARDEIHEAVATKQTILRLLFRLI 192 (684)
T ss_dssp HHHH-TTHHHHHHHHHHHHHHHHHCBTTBGGGSCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHTCHHHHHHHHHHH
T ss_pred HHHH-cChHHHHHHHHHhhHHHHhhhccccccccHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhcccHHHHHHHHH
Confidence 7777 6789999998864211 1236788999999987765443333 344677777666
Q ss_pred hCC-CCHHHHHHHHHHHHHHHhc
Q 044095 272 QGN-CTPRGRRKGTQLLKSLKEY 293 (308)
Q Consensus 272 qg~-cS~raKrKA~~LLklL~~~ 293 (308)
..+ .....+..|.+.|..|.+.
T Consensus 193 ~~~~~~~~v~~~a~~~L~~ls~d 215 (684)
T 4gmo_A 193 SADIAPQDIYEEAISCLTTLSED 215 (684)
T ss_dssp HHCCSCHHHHHHHHHHHHHHHTT
T ss_pred hcCCCcHHHHHHHHHHHHHHhcc
Confidence 543 2456667777777776553
No 40
>3grl_A General vesicular transport factor P115; vesicle transport, membrane trafficking, membrane tethering, fusion, snare, RAB GTPase, armadillo repeats; 2.00A {Bos taurus} PDB: 3gq2_A 2w3c_A
Probab=97.73 E-value=3.4e-05 Score=79.67 Aligned_cols=118 Identities=11% Similarity=0.081 Sum_probs=97.8
Q ss_pred ccchHHHHHHHhCCCCCCCCCcHHHHHHHhcCCC--CcHHHHHHh-CcHHHHHHHHhccChhHHHHHHHHHHHHhcChhh
Q 044095 135 RLAALYLLERSLLPNPPSDQACQPELMRALCLAE--SNRRVAVEA-GAVGAVIEVVAELDAAAGERALAALELMCTVAEG 211 (308)
Q Consensus 135 ~~~AI~lLV~LL~~g~~~~k~~a~a~l~aL~~~~--~Nr~~iV~a-GAVp~LVeLL~~~s~~~~E~ALAiL~~La~~~eG 211 (308)
..+.|.+|+++|+.+..-.+..+--++..||... ++...|..+ |+|+.||++|.|..+....+|+.+|..|+.....
T Consensus 120 ~~~~i~~Ll~lL~~~df~vR~~alqlL~~L~~~r~~~~Q~~Il~~p~gi~~Lv~lL~d~rE~iRneallLL~~Lt~~n~~ 199 (651)
T 3grl_A 120 QQENVTLLLSLLEEFDFHVRWPGVKLLTSLLKQLGPQVQQIILVSPMGVSRLMDLLADSREVIRNDGVLLLQALTRSNGA 199 (651)
T ss_dssp STHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHSHHHHHHHHHHSTTHHHHHHGGGGCSSHHHHHHHHHHHHHHHTTCHH
T ss_pred CCccHHHHHHHhcCccHHHHHHHHHHHHHHHhcCcHHHHHHHHhCcccHHHHHHHHhCchHHHHHHHHHHHHHHhcCCHH
Confidence 3689999999998876434433446777888654 367888877 9999999999998999999999999999998877
Q ss_pred HHHHHhccCcHHHHHHHhcC-C---CHHHHHHHHHHHHHHhcCCc
Q 044095 212 AEETRAHALAVPVMVTMMGQ-M---AGRGKEYAISVLAVIYGGGD 252 (308)
Q Consensus 212 r~aI~~~~gaIp~LV~lLr~-g---S~~~KE~AVa~L~sLC~~~~ 252 (308)
...|.+.+|+++.|+++++. | ....-++|+.+|.+|.+++.
T Consensus 200 iQklVAFEnaFe~Lf~Ii~~Eg~~~Ggivv~DCL~ll~nLLr~N~ 244 (651)
T 3grl_A 200 IQKIVAFENAFERLLDIITEEGNSDGGIVVEDCLILLQNLLKNNN 244 (651)
T ss_dssp HHHHHHHTTHHHHHHHHHHHHTGGGSHHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHhccHHHHHHHHHhcCCCccchhHHHHHHHHHHHHhcCH
Confidence 88888889999999999986 3 23566899999999998874
No 41
>3grl_A General vesicular transport factor P115; vesicle transport, membrane trafficking, membrane tethering, fusion, snare, RAB GTPase, armadillo repeats; 2.00A {Bos taurus} PDB: 3gq2_A 2w3c_A
Probab=97.62 E-value=0.00024 Score=73.38 Aligned_cols=156 Identities=10% Similarity=0.057 Sum_probs=110.8
Q ss_pred chHHHHHHHhCCCCCCCCCcHHHHHH---H-hcCCCC-----------------cH-HHHHHhCcHHHHHHHHhccChhH
Q 044095 137 AALYLLERSLLPNPPSDQACQPELMR---A-LCLAES-----------------NR-RVAVEAGAVGAVIEVVAELDAAA 194 (308)
Q Consensus 137 ~AI~lLV~LL~~g~~~~k~~a~a~l~---a-L~~~~~-----------------Nr-~~iV~aGAVp~LVeLL~~~s~~~ 194 (308)
.+++.|++.|++|..... ..+.++- + ++..++ |- .-+-+.+.|+.|+++|.+.+-..
T Consensus 60 ~~l~~li~~L~~d~~D~e-~v~~~LetL~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~f~~~~~~i~~Ll~lL~~~df~v 138 (651)
T 3grl_A 60 QAMEHLIHVLQTDRSDSE-IIGYALDTLYNIISNDEEEEVEENSTRQSEDLGSQFTEIFIKQQENVTLLLSLLEEFDFHV 138 (651)
T ss_dssp HTHHHHHHHHHSCTTCHH-HHHHHHHHHHHHHCCC--------------CHHHHHHHHHHHSTHHHHHHHHHTTCCCHHH
T ss_pred hhHHHHHHHHhcccccHH-HHHHHHHHHHHHhCCCCcccccccccccchHHHHHHHHHHHcCCccHHHHHHHhcCccHHH
Confidence 589999999998862211 1122333 2 333322 11 11234688999999998877888
Q ss_pred HHHHHHHHHHHhcCh--hhHHHHHhccCcHHHHHHHhcCCCHHHHHHHHHHHHHHhcCCcchhhccCCccH-HHHHHHHH
Q 044095 195 GERALAALELMCTVA--EGAEETRAHALAVPVMVTMMGQMAGRGKEYAISVLAVIYGGGDQLVVAAPPEEV-ARAVELAL 271 (308)
Q Consensus 195 ~E~ALAiL~~La~~~--eGr~aI~~~~gaIp~LV~lLr~gS~~~KE~AVa~L~sLC~~~~~~v~~a~~~gv-~~Ll~Lll 271 (308)
.-.++.+|..|+.+. +..++|....+||+.||++|.+..+--|..|+.+|.+|+.++.+.-..+..+|+ ..|+.++.
T Consensus 139 R~~alqlL~~L~~~r~~~~Q~~Il~~p~gi~~Lv~lL~d~rE~iRneallLL~~Lt~~n~~iQklVAFEnaFe~Lf~Ii~ 218 (651)
T 3grl_A 139 RWPGVKLLTSLLKQLGPQVQQIILVSPMGVSRLMDLLADSREVIRNDGVLLLQALTRSNGAIQKIVAFENAFERLLDIIT 218 (651)
T ss_dssp HHHHHHHHHHHHHHSHHHHHHHHHHSTTHHHHHHGGGGCSSHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCcHHHHHHHHhCcccHHHHHHHHhCchHHHHHHHHHHHHHHhcCCHHHHHHHHHhccHHHHHHHHH
Confidence 889999999999864 368899988899999999999999999999999999999988654333445564 56766665
Q ss_pred hCCC--CHHHHHHHHHHHHHHHhc
Q 044095 272 QGNC--TPRGRRKGTQLLKSLKEY 293 (308)
Q Consensus 272 qg~c--S~raKrKA~~LLklL~~~ 293 (308)
..|+ ....-+.+..||..|-+.
T Consensus 219 ~Eg~~~Ggivv~DCL~ll~nLLr~ 242 (651)
T 3grl_A 219 EEGNSDGGIVVEDCLILLQNLLKN 242 (651)
T ss_dssp HHTGGGSHHHHHHHHHHHHHHHTT
T ss_pred hcCCCccchhHHHHHHHHHHHHhc
Confidence 4322 345667777777776655
No 42
>3ltm_A Alpha-REP4; protein engineering, heat-like repeat, protein binding; HET: 1PE 12P; 2.15A {Synthetic}
Probab=97.59 E-value=0.00069 Score=57.51 Aligned_cols=150 Identities=19% Similarity=0.156 Sum_probs=69.4
Q ss_pred ChHHHHHHHHhHhccCCCCcccchHHHHHHHhCCCCCCCCCcHHHHHHHhcCCCCcHHHHHHhCcHHHHHHHHhccChhH
Q 044095 115 SLQELFHLAELQLSSGSDSDRLAALYLLERSLLPNPPSDQACQPELMRALCLAESNRRVAVEAGAVGAVIEVVAELDAAA 194 (308)
Q Consensus 115 ~~~~~f~l~~l~lss~~i~~~~~AI~lLV~LL~~g~~~~k~~a~a~l~aL~~~~~Nr~~iV~aGAVp~LVeLL~~~s~~~ 194 (308)
..+++..|+.+. ..++++.|+++|..+...-+ ..++..|.... ..++++.|+++|.+.+..+
T Consensus 36 R~~A~~~L~~~~--------~~~~~~~L~~~l~~~~~~vr---~~a~~aL~~~~-------~~~~~~~L~~~l~~~~~~v 97 (211)
T 3ltm_A 36 RRAAAYALGKIG--------DERAVEPLIKALKDEDAWVR---RAAADALGQIG-------DERAVEPLIKALKDEDGWV 97 (211)
T ss_dssp HHHHHHHHHHHC--------CGGGHHHHHHHTTCSCHHHH---HHHHHHHHHHC-------CGGGHHHHHHHTTCSSHHH
T ss_pred HHHHHHHHHHhC--------CccHHHHHHHHHcCCCHHHH---HHHHHHHHhhC-------CHHHHHHHHHHHcCCCHHH
Confidence 355666666542 14788888888875432222 22333332111 1345566666665555555
Q ss_pred HHHHHHHHHHHhcChhh---------------H----HHHH--hccCcHHHHHHHhcCCCHHHHHHHHHHHHHHhcCCcc
Q 044095 195 GERALAALELMCTVAEG---------------A----EETR--AHALAVPVMVTMMGQMAGRGKEYAISVLAVIYGGGDQ 253 (308)
Q Consensus 195 ~E~ALAiL~~La~~~eG---------------r----~aI~--~~~gaIp~LV~lLr~gS~~~KE~AVa~L~sLC~~~~~ 253 (308)
...|+.+|..+... +. | .+++ ....+++.|+++|.+.+..-|..|+.+|..+..
T Consensus 98 r~~a~~aL~~~~~~-~~~~~L~~~l~d~~~~vr~~a~~aL~~~~~~~~~~~L~~~l~d~~~~vr~~a~~aL~~~~~---- 172 (211)
T 3ltm_A 98 RQSAAVALGQIGDE-RAVEPLIKALKDEDWFVRIAAAFALGEIGDERAVEPLIKALKDEDGWVRQSAADALGEIGG---- 172 (211)
T ss_dssp HHHHHHHHHHHCCG-GGHHHHHHHTTCSSHHHHHHHHHHHHHHCCGGGHHHHHHHTTCSSHHHHHHHHHHHHHHCS----
T ss_pred HHHHHHHHHHhCcH-HHHHHHHHHHhCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHhCc----
Confidence 55555555554320 00 0 0000 001234445555544444444444444444411
Q ss_pred hhhccCCccHHHHHHHHHhCCCCHHHHHHHHHHHHHHHhcCC
Q 044095 254 LVVAAPPEEVARAVELALQGNCTPRGRRKGTQLLKSLKEYGQ 295 (308)
Q Consensus 254 ~v~~a~~~gv~~Ll~Lllqg~cS~raKrKA~~LLklL~~~~e 295 (308)
.+.+..|..++.+. ++..|+.|.+.|..+.....
T Consensus 173 ------~~~~~~L~~~l~d~--~~~vr~~A~~aL~~~~~~~~ 206 (211)
T 3ltm_A 173 ------ERVRAAMEKLAETG--TGFARKVAVNYLETHKSFNH 206 (211)
T ss_dssp ------HHHHHHHHHHHHHC--CHHHHHHHHHHHHC------
T ss_pred ------hhHHHHHHHHHhCC--CHHHHHHHHHHHHhcCCCCC
Confidence 11133444444444 78888888888777665543
No 43
>3ltj_A Alpharep-4; protein engineering, heat-like repeat, protein binding; 1.80A {Synthetic}
Probab=97.51 E-value=0.0013 Score=55.29 Aligned_cols=104 Identities=17% Similarity=0.088 Sum_probs=55.2
Q ss_pred ChHHHHHHHHhHhccCCCCcccchHHHHHHHhCCCCCCCCCcHHHHHHHhcCCCCcHHHHHHhCcHHHHHHHHhccChhH
Q 044095 115 SLQELFHLAELQLSSGSDSDRLAALYLLERSLLPNPPSDQACQPELMRALCLAESNRRVAVEAGAVGAVIEVVAELDAAA 194 (308)
Q Consensus 115 ~~~~~f~l~~l~lss~~i~~~~~AI~lLV~LL~~g~~~~k~~a~a~l~aL~~~~~Nr~~iV~aGAVp~LVeLL~~~s~~~ 194 (308)
..+++.+|+.+. ...+++.|+++|..+....+ ..++..|.... ...+++.|+++|.+.+...
T Consensus 31 r~~A~~~L~~~~--------~~~~~~~L~~~l~~~~~~vr---~~a~~~L~~~~-------~~~~~~~L~~~l~d~~~~v 92 (201)
T 3ltj_A 31 RRAAAYALGKIG--------DERAVEPLIKALKDEDAWVR---RAAADALGQIG-------DERAVEPLIKALKDEDGWV 92 (201)
T ss_dssp HHHHHHHHHHHC--------CGGGHHHHHHHTTCSSHHHH---HHHHHHHHHHC-------CGGGHHHHHHHTTCSSHHH
T ss_pred HHHHHHHHHhcC--------ChhHHHHHHHHHcCCCHHHH---HHHHHHHHhhC-------CHHHHHHHHHHHcCCCHHH
Confidence 355666666532 14788889988875432222 22333332111 1245666666666666666
Q ss_pred HHHHHHHHHHHhcChhhHHHHHhccCcHHHHHHHhcCCCHHHHHHHHHHHHHH
Q 044095 195 GERALAALELMCTVAEGAEETRAHALAVPVMVTMMGQMAGRGKEYAISVLAVI 247 (308)
Q Consensus 195 ~E~ALAiL~~La~~~eGr~aI~~~~gaIp~LV~lLr~gS~~~KE~AVa~L~sL 247 (308)
...|+.+|..+.. ..+++.|+++|.+.+..-|..|+.+|..+
T Consensus 93 r~~a~~aL~~~~~-----------~~~~~~L~~~l~d~~~~vr~~a~~aL~~~ 134 (201)
T 3ltj_A 93 RQSAAVALGQIGD-----------ERAVEPLIKALKDEDWFVRIAAAFALGEI 134 (201)
T ss_dssp HHHHHHHHHHHCC-----------GGGHHHHHHHTTCSSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCc-----------HHHHHHHHHHHcCCCHHHHHHHHHHHHHh
Confidence 6666666655432 12455555555555555555555555444
No 44
>3ltm_A Alpha-REP4; protein engineering, heat-like repeat, protein binding; HET: 1PE 12P; 2.15A {Synthetic}
Probab=97.42 E-value=0.0014 Score=55.51 Aligned_cols=92 Identities=18% Similarity=0.124 Sum_probs=61.8
Q ss_pred ccchHHHHHHHhCCCCCCCCCcHHHHHHHhcCCCCcHHHHHHhCcHHHHHHHHhccChhHHHHHHHHHHHHhcChhhHHH
Q 044095 135 RLAALYLLERSLLPNPPSDQACQPELMRALCLAESNRRVAVEAGAVGAVIEVVAELDAAAGERALAALELMCTVAEGAEE 214 (308)
Q Consensus 135 ~~~AI~lLV~LL~~g~~~~k~~a~a~l~aL~~~~~Nr~~iV~aGAVp~LVeLL~~~s~~~~E~ALAiL~~La~~~eGr~a 214 (308)
..++++.|+++|..+....+ ..++..|..... ..+++.|+++|.+.+......|+.+|..+..
T Consensus 17 ~~~~~~~L~~~L~~~~~~vR---~~A~~~L~~~~~-------~~~~~~L~~~l~~~~~~vr~~a~~aL~~~~~------- 79 (211)
T 3ltm_A 17 DPEKVEMYIKNLQDDSYYVR---RAAAYALGKIGD-------ERAVEPLIKALKDEDAWVRRAAADALGQIGD------- 79 (211)
T ss_dssp CGGGHHHHHHHTTCSSHHHH---HHHHHHHHHHCC-------GGGHHHHHHHTTCSCHHHHHHHHHHHHHHCC-------
T ss_pred CHhHHHHHHHHHcCCCHHHH---HHHHHHHHHhCC-------ccHHHHHHHHHcCCCHHHHHHHHHHHHhhCC-------
Confidence 46899999999986543222 234444442221 4789999999998888888888888887753
Q ss_pred HHhccCcHHHHHHHhcCCCHHHHHHHHHHHHHH
Q 044095 215 TRAHALAVPVMVTMMGQMAGRGKEYAISVLAVI 247 (308)
Q Consensus 215 I~~~~gaIp~LV~lLr~gS~~~KE~AVa~L~sL 247 (308)
..+++.|+++|.+....-|..|+.+|..+
T Consensus 80 ----~~~~~~L~~~l~~~~~~vr~~a~~aL~~~ 108 (211)
T 3ltm_A 80 ----ERAVEPLIKALKDEDGWVRQSAAVALGQI 108 (211)
T ss_dssp ----GGGHHHHHHHTTCSSHHHHHHHHHHHHHH
T ss_pred ----HHHHHHHHHHHcCCCHHHHHHHHHHHHHh
Confidence 23556666666655566666666666555
No 45
>3ltj_A Alpharep-4; protein engineering, heat-like repeat, protein binding; 1.80A {Synthetic}
Probab=97.33 E-value=0.0031 Score=52.95 Aligned_cols=123 Identities=22% Similarity=0.131 Sum_probs=80.9
Q ss_pred cchHHHHHHHhCCCCCCCCCcHHHHHHHhcCCCCcHHHHHHhCcHHHHHHHHhccChhHHHHHHHHHHHHhcChhhHHHH
Q 044095 136 LAALYLLERSLLPNPPSDQACQPELMRALCLAESNRRVAVEAGAVGAVIEVVAELDAAAGERALAALELMCTVAEGAEET 215 (308)
Q Consensus 136 ~~AI~lLV~LL~~g~~~~k~~a~a~l~aL~~~~~Nr~~iV~aGAVp~LVeLL~~~s~~~~E~ALAiL~~La~~~eGr~aI 215 (308)
.++++.|+++|.......+ ..++.+|.... ...+++.|+++|.+.+..+...|+.+|..+..
T Consensus 75 ~~~~~~L~~~l~d~~~~vr---~~a~~aL~~~~-------~~~~~~~L~~~l~d~~~~vr~~a~~aL~~~~~-------- 136 (201)
T 3ltj_A 75 ERAVEPLIKALKDEDGWVR---QSAAVALGQIG-------DERAVEPLIKALKDEDWFVRIAAAFALGEIGD-------- 136 (201)
T ss_dssp GGGHHHHHHHTTCSSHHHH---HHHHHHHHHHC-------CGGGHHHHHHHTTCSSHHHHHHHHHHHHHHTC--------
T ss_pred HHHHHHHHHHHcCCCHHHH---HHHHHHHHHhC-------cHHHHHHHHHHHcCCCHHHHHHHHHHHHHhCC--------
Confidence 4678888888865432222 23333443221 13578888888888777888888888877642
Q ss_pred HhccCcHHHHHHHhcCCCHHHHHHHHHHHHHHhcCCcchhhccCCccHHHHHHHHHhCCCCHHHHHHHHHHHHHHH
Q 044095 216 RAHALAVPVMVTMMGQMAGRGKEYAISVLAVIYGGGDQLVVAAPPEEVARAVELALQGNCTPRGRRKGTQLLKSLK 291 (308)
Q Consensus 216 ~~~~gaIp~LV~lLr~gS~~~KE~AVa~L~sLC~~~~~~v~~a~~~gv~~Ll~Lllqg~cS~raKrKA~~LLklL~ 291 (308)
..+++.|+++|.+.+..-|..|+.+|..+. + .+.+..|..++.+. ++..|+.|.+.|..+.
T Consensus 137 ---~~~~~~L~~~l~d~~~~vr~~A~~aL~~~~--~--------~~~~~~L~~~l~d~--~~~vr~~A~~aL~~l~ 197 (201)
T 3ltj_A 137 ---ERAVEPLIKALKDEDGWVRQSAADALGEIG--G--------ERVRAAMEKLAETG--TGFARKVAVNYLETHK 197 (201)
T ss_dssp ---GGGHHHHHHHTTCSSHHHHHHHHHHHHHHC--S--------HHHHHHHHHHHHHC--CHHHHHHHHHHHHHCC
T ss_pred ---HHHHHHHHHHHcCCCHHHHHHHHHHHHHhC--c--------hhHHHHHHHHHhCC--CHHHHHHHHHHHHHHH
Confidence 357888888888888888888888888772 1 12234455555444 7888888887776654
No 46
>1te4_A Conserved protein MTH187; methanobacterium thermoautotrophicum, structural proteomics, heat-like repeat; NMR {Methanothermobacterthermautotrophicus} SCOP: a.118.1.16
Probab=96.55 E-value=0.0013 Score=52.66 Aligned_cols=120 Identities=17% Similarity=0.070 Sum_probs=72.5
Q ss_pred ccchHHHHHHHhCCCCCCCCCcHHHHHHHhcCCCCcHHHHHHhCcHHHHHHHHhccChhHHHHHHHHHHHHhcChhhHHH
Q 044095 135 RLAALYLLERSLLPNPPSDQACQPELMRALCLAESNRRVAVEAGAVGAVIEVVAELDAAAGERALAALELMCTVAEGAEE 214 (308)
Q Consensus 135 ~~~AI~lLV~LL~~g~~~~k~~a~a~l~aL~~~~~Nr~~iV~aGAVp~LVeLL~~~s~~~~E~ALAiL~~La~~~eGr~a 214 (308)
....++.|+.+|.......+.. ++..|....+. +++.|+++|.+.+......|+.+|..+..
T Consensus 10 ~~~~~~~l~~~L~~~~~~vR~~---A~~~L~~~~~~--------~~~~L~~~L~d~~~~vR~~A~~aL~~~~~------- 71 (131)
T 1te4_A 10 HSSGLVPRGSHMADENKWVRRD---VSTALSRMGDE--------AFEPLLESLSNEDWRIRGAAAWIIGNFQD------- 71 (131)
T ss_dssp -----------CCSSCCCSSSS---CCSSTTSCSST--------THHHHHHGGGCSCHHHHHHHHHHHGGGCS-------
T ss_pred ccccHHHHHHHhcCCCHHHHHH---HHHHHHHhCch--------HHHHHHHHHcCCCHHHHHHHHHHHHhcCC-------
Confidence 4567888999998665444422 22234433221 37899999998888888888888877653
Q ss_pred HHhccCcHHHHHHHhcCCCHHHHHHHHHHHHHHhcCCcchhhccCCccHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 044095 215 TRAHALAVPVMVTMMGQMAGRGKEYAISVLAVIYGGGDQLVVAAPPEEVARAVELALQGNCTPRGRRKGTQLLK 288 (308)
Q Consensus 215 I~~~~gaIp~LV~lLr~gS~~~KE~AVa~L~sLC~~~~~~v~~a~~~gv~~Ll~Lllqg~cS~raKrKA~~LLk 288 (308)
..+++.|++.|.+.+..-|..|+.+|..+.. .+.+..|+.++. +.+...|+.|...|.
T Consensus 72 ----~~a~~~L~~~L~d~~~~VR~~A~~aL~~~~~----------~~a~~~L~~~l~--d~~~~vr~~A~~aL~ 129 (131)
T 1te4_A 72 ----ERAVEPLIKLLEDDSGFVRSGAARSLEQIGG----------ERVRAAMEKLAE--TGTGFARKVAVNYLE 129 (131)
T ss_dssp ----HHHHHHHHHHHHHCCTHHHHHHHHHHHHHCS----------HHHHHHHHHHTT--SCCTHHHHHHHHHGG
T ss_pred ----HHHHHHHHHHHcCCCHHHHHHHHHHHHHhCc----------HHHHHHHHHHHh--CCCHHHHHHHHHHHH
Confidence 2358899999988888999999999988741 122445554443 336777777776553
No 47
>1oyz_A Hypothetical protein YIBA; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.10A {Escherichia coli} SCOP: a.118.1.16
Probab=96.34 E-value=0.025 Score=49.89 Aligned_cols=93 Identities=10% Similarity=0.028 Sum_probs=64.2
Q ss_pred chHHHHHHHhCCCCCCCCCcHHHHHHHhcCCCCcHHHHHHhCcHHHHHHHHhccChhHHHHHHHHHHHHhcChhhHHHHH
Q 044095 137 AALYLLERSLLPNPPSDQACQPELMRALCLAESNRRVAVEAGAVGAVIEVVAELDAAAGERALAALELMCTVAEGAEETR 216 (308)
Q Consensus 137 ~AI~lLV~LL~~g~~~~k~~a~a~l~aL~~~~~Nr~~iV~aGAVp~LVeLL~~~s~~~~E~ALAiL~~La~~~eGr~aI~ 216 (308)
.+++.|+.+|......-+ ..++.+|..... .++++.|+++|.+.+..+...|+..|..+...
T Consensus 128 ~~~~~L~~~l~d~~~~vR---~~a~~aL~~~~~-------~~~~~~L~~~l~d~~~~vr~~a~~aL~~~~~~-------- 189 (280)
T 1oyz_A 128 KIVEQSQITAFDKSTNVR---RATAFAISVIND-------KATIPLLINLLKDPNGDVRNWAAFAININKYD-------- 189 (280)
T ss_dssp HHHHHHHHHTTCSCHHHH---HHHHHHHHTC----------CCHHHHHHHHTCSSHHHHHHHHHHHHHHTCC--------
T ss_pred HHHHHHHHHhhCCCHHHH---HHHHHHHHhcCC-------HHHHHHHHHHHcCCCHHHHHHHHHHHHhhccC--------
Confidence 577777777765432222 233444443221 35899999999988888888888888887432
Q ss_pred hccCcHHHHHHHhcCCCHHHHHHHHHHHHHHh
Q 044095 217 AHALAVPVMVTMMGQMAGRGKEYAISVLAVIY 248 (308)
Q Consensus 217 ~~~gaIp~LV~lLr~gS~~~KE~AVa~L~sLC 248 (308)
...+++.|+++|.+....-|..|+.+|..+.
T Consensus 190 -~~~~~~~L~~~l~d~~~~vR~~A~~aL~~~~ 220 (280)
T 1oyz_A 190 -NSDIRDCFVEMLQDKNEEVRIEAIIGLSYRK 220 (280)
T ss_dssp -CHHHHHHHHHHTTCSCHHHHHHHHHHHHHTT
T ss_pred -cHHHHHHHHHHhcCCCHHHHHHHHHHHHHhC
Confidence 1246788889998888888899998888775
No 48
>4gmo_A Putative uncharacterized protein; ARM, heat, solenoid, nuclear transport, chaperone, RPL5, RPL KAP104, nucleus; 2.10A {Chaetomium thermophilum var} PDB: 4gmn_A
Probab=96.25 E-value=0.0078 Score=61.60 Aligned_cols=99 Identities=13% Similarity=0.065 Sum_probs=76.1
Q ss_pred HHHHHHhCcHHHHHHHHhccChhHHHHHHHHHHHHhcChhhHHHHHhccCcHHHHHH-HhcCCCHHHHHHHHHHHHHHhc
Q 044095 171 RRVAVEAGAVGAVIEVVAELDAAAGERALAALELMCTVAEGAEETRAHALAVPVMVT-MMGQMAGRGKEYAISVLAVIYG 249 (308)
Q Consensus 171 r~~iV~aGAVp~LVeLL~~~s~~~~E~ALAiL~~La~~~eGr~aI~~~~gaIp~LV~-lLr~gS~~~KE~AVa~L~sLC~ 249 (308)
.....+...|.+|++.|.+.+.+.++.|+.+|.+|+..++.|..+.. .++|..++. +|.+.+..-++.|+++|-+||.
T Consensus 27 ~~~~~~~~~i~Pll~~L~S~~~~~r~~A~~al~~l~~~~~~~~l~~~-~~~v~~ll~~lL~D~~~~Vr~~A~gaLrnL~~ 105 (684)
T 4gmo_A 27 ELAKLREDKILPVLKDLKSPDAKSRTTAAGAIANIVQDAKCRKLLLR-EQVVHIVLTETLTDNNIDSRAAGWEILKVLAQ 105 (684)
T ss_dssp HHHHHHHHTTHHHHHHHSSSCCSHHHHHHHHHHHHTTSHHHHHHHHH-TTHHHHHHHTTTTCSCHHHHHHHHHHHHHHHH
T ss_pred cccccchhhHHHHHHHcCCCCHHHHHHHHHHHHHHHcCcHHHHHHHH-cCCHHHHHHHHcCCCCHHHHHHHHHHHHHHHh
Confidence 33445566778888999988889999999999999999898998877 677877655 5677899999999999999998
Q ss_pred CCcchh-hccCCccH-HHHHHHH
Q 044095 250 GGDQLV-VAAPPEEV-ARAVELA 270 (308)
Q Consensus 250 ~~~~~v-~~a~~~gv-~~Ll~Ll 270 (308)
..+..+ ....+.|| .+|+.++
T Consensus 106 ~~g~d~~~~l~~~~il~~L~~~l 128 (684)
T 4gmo_A 106 EEEADFCVHLYRLDVLTAIEHAA 128 (684)
T ss_dssp HSCHHHHHHHHHTTHHHHHHHHH
T ss_pred hcCchHHHHHHHcChHHHHHHHH
Confidence 765433 33445554 4555544
No 49
>2qk2_A LP04448P; mini spindles, MSPS, XMAP215, DIS1, STU2, heat repeat, micro plus END, +TIP, protein binding; 2.10A {Drosophila melanogaster}
Probab=95.94 E-value=0.033 Score=48.49 Aligned_cols=108 Identities=11% Similarity=0.019 Sum_probs=74.1
Q ss_pred CcHHHHHHHHhccChhHHHHHHHHHHHHhcChhhHHHHHhccCcHHHHHHHhcCCCHHHHHHHHHHHHHHhcC-Ccch-h
Q 044095 178 GAVGAVIEVVAELDAAAGERALAALELMCTVAEGAEETRAHALAVPVMVTMMGQMAGRGKEYAISVLAVIYGG-GDQL-V 255 (308)
Q Consensus 178 GAVp~LVeLL~~~s~~~~E~ALAiL~~La~~~eGr~aI~~~~gaIp~LV~lLr~gS~~~KE~AVa~L~sLC~~-~~~~-v 255 (308)
-.++.|++.+.|.+..+.+.|..+|..+..+-. + ...++.|.+.|.+.+.+.|+.++..|..+... +.+. .
T Consensus 98 ~ilp~ll~~l~d~~~~vr~~a~~aL~~~~~~~~----~---~~ll~~l~~~l~~~~~~vr~~~l~~l~~~l~~~~~~~~~ 170 (242)
T 2qk2_A 98 ACVPSLLEKFKEKKPNVVTALREAIDAIYASTS----L---EAQQESIVESLSNKNPSVKSETALFIARALTRTQPTALN 170 (242)
T ss_dssp HHHHHHHHGGGCCCHHHHHHHHHHHHHHHTTSC----H---HHHHHHHHHHTTCSCHHHHHHHHHHHHHHHTTCCGGGCC
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHcCC----H---HHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHcCCCCcc
Confidence 367888888888888899999999999887532 1 13577788888888999999999999996543 2221 1
Q ss_pred hccCCccHHHHHHHHHhCCCCHHHHHHHHHHHHHHHhcC
Q 044095 256 VAAPPEEVARAVELALQGNCTPRGRRKGTQLLKSLKEYG 294 (308)
Q Consensus 256 ~~a~~~gv~~Ll~Lllqg~cS~raKrKA~~LLklL~~~~ 294 (308)
...+..-++.++.++ .|...+.|+.|.+.|..|...-
T Consensus 171 ~~~l~~l~p~l~~~l--~D~~~~VR~~A~~~l~~l~~~v 207 (242)
T 2qk2_A 171 KKLLKLLTTSLVKTL--NEPDPTVRDSSAEALGTLIKLM 207 (242)
T ss_dssp HHHHHHHHHHHHHHH--TSSCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHh--cCCChHHHHHHHHHHHHHHHHc
Confidence 111112234444444 3348899999998877776543
No 50
>1oyz_A Hypothetical protein YIBA; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.10A {Escherichia coli} SCOP: a.118.1.16
Probab=95.87 E-value=0.022 Score=50.19 Aligned_cols=62 Identities=18% Similarity=0.004 Sum_probs=38.1
Q ss_pred cchHHHHHHHhCCCCCCCCCcHHHHHHHhcCCCCcHHHHHHhCcHHHHHHHHhccChhHHHHHHHHHHHHhc
Q 044095 136 LAALYLLERSLLPNPPSDQACQPELMRALCLAESNRRVAVEAGAVGAVIEVVAELDAAAGERALAALELMCT 207 (308)
Q Consensus 136 ~~AI~lLV~LL~~g~~~~k~~a~a~l~aL~~~~~Nr~~iV~aGAVp~LVeLL~~~s~~~~E~ALAiL~~La~ 207 (308)
..+++.|+++|..+....+ ..++..|.... ..++++.|+++|.+.+......|+.+|..+..
T Consensus 22 ~~~i~~L~~~L~~~~~~vr---~~A~~~L~~~~-------~~~~~~~L~~~l~d~~~~vR~~A~~aL~~l~~ 83 (280)
T 1oyz_A 22 KLNDDELFRLLDDHNSLKR---ISSARVLQLRG-------GQDAVRLAIEFCSDKNYIRRDIGAFILGQIKI 83 (280)
T ss_dssp TSCHHHHHHHTTCSSHHHH---HHHHHHHHHHC-------CHHHHHHHHHHHTCSSHHHHHHHHHHHHHSCC
T ss_pred HhhHHHHHHHHHcCCHHHH---HHHHHHHHccC-------CchHHHHHHHHHcCCCHHHHHHHHHHHHHhcc
Confidence 4688999999976543222 12333333111 23567788888877777777777777766653
No 51
>1te4_A Conserved protein MTH187; methanobacterium thermoautotrophicum, structural proteomics, heat-like repeat; NMR {Methanothermobacterthermautotrophicus} SCOP: a.118.1.16
Probab=95.74 E-value=0.0094 Score=47.47 Aligned_cols=88 Identities=16% Similarity=0.077 Sum_probs=65.1
Q ss_pred hHHHHHHHhCCCCCCCCCcHHHHHHHhcCCCCcHHHHHHhCcHHHHHHHHhccChhHHHHHHHHHHHHhcChhhHHHHHh
Q 044095 138 ALYLLERSLLPNPPSDQACQPELMRALCLAESNRRVAVEAGAVGAVIEVVAELDAAAGERALAALELMCTVAEGAEETRA 217 (308)
Q Consensus 138 AI~lLV~LL~~g~~~~k~~a~a~l~aL~~~~~Nr~~iV~aGAVp~LVeLL~~~s~~~~E~ALAiL~~La~~~eGr~aI~~ 217 (308)
+++.|+++|+.....-+ ..++.+|....+ ..+|+.|+++|.+.+..+...|+.+|..+..
T Consensus 43 ~~~~L~~~L~d~~~~vR---~~A~~aL~~~~~-------~~a~~~L~~~L~d~~~~VR~~A~~aL~~~~~---------- 102 (131)
T 1te4_A 43 AFEPLLESLSNEDWRIR---GAAAWIIGNFQD-------ERAVEPLIKLLEDDSGFVRSGAARSLEQIGG---------- 102 (131)
T ss_dssp THHHHHHGGGCSCHHHH---HHHHHHHGGGCS-------HHHHHHHHHHHHHCCTHHHHHHHHHHHHHCS----------
T ss_pred HHHHHHHHHcCCCHHHH---HHHHHHHHhcCC-------HHHHHHHHHHHcCCCHHHHHHHHHHHHHhCc----------
Confidence 57999999985432222 345555554432 2469999999999889999999999988752
Q ss_pred ccCcHHHHHHHhcCCCHHHHHHHHHHHHH
Q 044095 218 HALAVPVMVTMMGQMAGRGKEYAISVLAV 246 (308)
Q Consensus 218 ~~gaIp~LV~lLr~gS~~~KE~AVa~L~s 246 (308)
..+++.|+++|++....-|..|+.+|..
T Consensus 103 -~~a~~~L~~~l~d~~~~vr~~A~~aL~~ 130 (131)
T 1te4_A 103 -ERVRAAMEKLAETGTGFARKVAVNYLET 130 (131)
T ss_dssp -HHHHHHHHHHTTSCCTHHHHHHHHHGGG
T ss_pred -HHHHHHHHHHHhCCCHHHHHHHHHHHHh
Confidence 2468999999988888888888887753
No 52
>3dad_A FH1/FH2 domain-containing protein 1; formin, FHOD1, GTPase-binding domain, ubiquitin-superfold, armadillo repeats, actin-binding, coiled coil; 2.30A {Homo sapiens}
Probab=95.54 E-value=0.093 Score=50.29 Aligned_cols=135 Identities=16% Similarity=0.092 Sum_probs=100.7
Q ss_pred HHHHHHhc----CCCCcHHHHHHhCcHHHHHHHHhccChhHHHHHHHHHHHHhcChhhHHHHHhccCcHHHHHHHhcCCC
Q 044095 158 PELMRALC----LAESNRRVAVEAGAVGAVIEVVAELDAAAGERALAALELMCTVAEGAEETRAHALAVPVMVTMMGQMA 233 (308)
Q Consensus 158 ~a~l~aL~----~~~~Nr~~iV~aGAVp~LVeLL~~~s~~~~E~ALAiL~~La~~~eGr~aI~~~~gaIp~LV~lLr~gS 233 (308)
..+|..|. .+..=-...|+.+.+..|+.++.+++.+....+|.+|..|-.+.+|...|..+...|.-|+.++....
T Consensus 136 r~aLfsLk~~~q~D~~Fa~EFI~~~GL~~Li~vi~~~~gN~q~Y~L~AL~~LM~~v~Gm~gvvs~~~fI~~lyslv~s~~ 215 (339)
T 3dad_A 136 RRSLFSLKQIFQEDKDLVPEFVHSEGLSCLIRVGAAADHNYQSYILRALGQLMLFVDGMLGVVAHSDTIQWLYTLCASLS 215 (339)
T ss_dssp HHHHHHHHHHHHTCTTHHHHHHHTTHHHHHHHHHTTSCHHHHHHHHHHHHHHTTSHHHHHHHHHCHHHHHHHHHGGGCSC
T ss_pred HHHHHHHHHHhhcchHHHHHHHHhccHHHHHHHHHhcChHHHHHHHHHHHHHHhccccccchhCCHHHHHHHHHHHcCcc
Confidence 35555555 34445677888899999999999999999999999999999999999999988889999999999766
Q ss_pred HHHHHHHHHHHHHHhcCCcchh---hccC-----Ccc---HHHHHHHHHh-CCCCHHHHHHHHHHHHHHHh
Q 044095 234 GRGKEYAISVLAVIYGGGDQLV---VAAP-----PEE---VARAVELALQ-GNCTPRGRRKGTQLLKSLKE 292 (308)
Q Consensus 234 ~~~KE~AVa~L~sLC~~~~~~v---~~a~-----~~g---v~~Ll~Lllq-g~cS~raKrKA~~LLklL~~ 292 (308)
..--+-|+.+|..+|.++.... ..++ ..| ...++.++.+ ++.+...+-+|-.|++.+-.
T Consensus 216 ~~V~k~AL~LL~v~V~~se~~~~lv~~av~~v~~~~~~~p~~~Lv~~L~~~~~~D~elq~~amtLIN~lL~ 286 (339)
T 3dad_A 216 RLVVKTALKLLLVFVEYSENNAPLFIRAVNSVASTTGAPPWANLVSILEEKNGADPELLVYTVTLINKTLA 286 (339)
T ss_dssp HHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCCCTTHHHHHHHTTTTSCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHccCcccchHHHHHHHHhhhccCCCcHHHHHHHHhccCCCCHHHHHHHHHHHHHHHh
Confidence 7777889999999998875221 1111 112 2345544431 22377888888888875543
No 53
>4fdd_A Transportin-1; heat repeats, karyopherin, nuclear import, protein transport importin, transportin, transport protein; 2.30A {Homo sapiens} PDB: 2ot8_A 2h4m_A 2z5k_A 2z5j_A 2qmr_A 2z5m_A 2z5n_A 2z5o_A 1qbk_B*
Probab=95.51 E-value=0.011 Score=60.64 Aligned_cols=150 Identities=11% Similarity=-0.032 Sum_probs=87.6
Q ss_pred chHHHHHHHhCCCCCCCCCcHHHHHHHhcCCCCcHHHHHHhCcHHHHHHHHhccChhHHHHHHHHHHHHhcChhh--HHH
Q 044095 137 AALYLLERSLLPNPPSDQACQPELMRALCLAESNRRVAVEAGAVGAVIEVVAELDAAAGERALAALELMCTVAEG--AEE 214 (308)
Q Consensus 137 ~AI~lLV~LL~~g~~~~k~~a~a~l~aL~~~~~Nr~~iV~aGAVp~LVeLL~~~s~~~~E~ALAiL~~La~~~eG--r~a 214 (308)
..++.|..+|.....+.+..+..++..++........-.-.+.++.|+.+|.|.+..++..|+.+|..++..-.. ...
T Consensus 359 ~l~~~l~~~l~~~~~~~R~aa~~alg~i~~~~~~~~~~~l~~~l~~l~~~l~d~~~~Vr~~a~~~l~~l~~~~~~~~~~~ 438 (852)
T 4fdd_A 359 HILPLLKELLFHHEWVVKESGILVLGAIAEGCMQGMIPYLPELIPHLIQCLSDKKALVRSITCWTLSRYAHWVVSQPPDT 438 (852)
T ss_dssp HHHHHHHHHHTCSSHHHHHHHHHHHHHTTTTTHHHHGGGHHHHHHHHHHHTTCSSHHHHHHHHHHHHHTHHHHHHSCTTT
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhccchHHH
Confidence 466777777765433233111123334443322111122356789999999988899999999999998863211 011
Q ss_pred HHhccCcHHHHHHHhcCCCHHHHHHHHHHHHHHhcCCcchhhccCCccHHHHHHHHHhCCCCHHHHHHHHHHHHHH
Q 044095 215 TRAHALAVPVMVTMMGQMAGRGKEYAISVLAVIYGGGDQLVVAAPPEEVARAVELALQGNCTPRGRRKGTQLLKSL 290 (308)
Q Consensus 215 I~~~~gaIp~LV~lLr~gS~~~KE~AVa~L~sLC~~~~~~v~~a~~~gv~~Ll~Lllqg~cS~raKrKA~~LLklL 290 (308)
. ....++.|++.|.+.+.+-|++|+.+|.++|...+.........-+..|+.++.+. ..+.++.+.+.+..+
T Consensus 439 ~--~~~ll~~L~~~L~d~~~~vr~~a~~aL~~l~~~~~~~l~~~l~~ll~~L~~~l~~~--~~~~~~~~~~ai~~l 510 (852)
T 4fdd_A 439 Y--LKPLMTELLKRILDSNKRVQEAACSAFATLEEEACTELVPYLAYILDTLVFAFSKY--QHKNLLILYDAIGTL 510 (852)
T ss_dssp T--HHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHGGGGGGGHHHHHHHHHHHHHHC--CHHHHHHHHHHHHHH
T ss_pred H--HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhhHhhHhHHHHHHHHHHHHHHHh--ChHHHHHHHHHHHHH
Confidence 1 12478889999988899999999999999997554433222211133444444333 344443333444433
No 54
>1b3u_A Protein (protein phosphatase PP2A); scaffold protein, phosphorylation, heat repeat; 2.30A {Homo sapiens} SCOP: a.118.1.2 PDB: 2ie4_A* 2ie3_A* 2npp_A* 3k7v_A* 3k7w_A* 3fga_A* 2pf4_A 2iae_A 2nym_A* 2nyl_A* 3dw8_A* 2pkg_A 3c5w_A
Probab=94.65 E-value=0.1 Score=49.77 Aligned_cols=112 Identities=12% Similarity=0.108 Sum_probs=72.9
Q ss_pred HhCcHHHHHHHHhccChhHHHHHHHHHHHHhcChhhHHHHHhccCcHHHHHHHhcCCCHHHHHHHHHHHHHHhcCCcchh
Q 044095 176 EAGAVGAVIEVVAELDAAAGERALAALELMCTVAEGAEETRAHALAVPVMVTMMGQMAGRGKEYAISVLAVIYGGGDQLV 255 (308)
Q Consensus 176 ~aGAVp~LVeLL~~~s~~~~E~ALAiL~~La~~~eGr~aI~~~~gaIp~LV~lLr~gS~~~KE~AVa~L~sLC~~~~~~v 255 (308)
....++.|++++.+.+....+.|+..|..++..-. ...+.. ..++.+.+++.+.+.+-|+.|+.+|..|+...+...
T Consensus 201 ~~~l~~~l~~~~~d~~~~vr~~a~~~l~~l~~~~~-~~~~~~--~~~~~l~~~~~d~~~~vR~~a~~~l~~l~~~~~~~~ 277 (588)
T 1b3u_A 201 KSEIIPMFSNLASDEQDSVRLLAVEACVNIAQLLP-QEDLEA--LVMPTLRQAAEDKSWRVRYMVADKFTELQKAVGPEI 277 (588)
T ss_dssp HHTHHHHHHHHHTCSCHHHHTTHHHHHHHHHHHSC-HHHHHH--HTHHHHHHHHTCSSHHHHHHHHHTHHHHHHHHCHHH
T ss_pred HHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHhCC-HHHHHH--HHHHHHHHHccCCCHHHHHHHHHHHHHHHHHhCccc
Confidence 35667888888887777888888888888876321 222222 367888888888888999999999999986422211
Q ss_pred hccCCccHHHHHHHHHhCCCCHHHHHHHHHHHHHHHhcC
Q 044095 256 VAAPPEEVARAVELALQGNCTPRGRRKGTQLLKSLKEYG 294 (308)
Q Consensus 256 ~~a~~~gv~~Ll~Lllqg~cS~raKrKA~~LLklL~~~~ 294 (308)
....-+..++.++. |.++..|+.|..-|..+.+..
T Consensus 278 --~~~~l~~~l~~~l~--d~~~~vr~~a~~~l~~~~~~~ 312 (588)
T 1b3u_A 278 --TKTDLVPAFQNLMK--DCEAEVRAAASHKVKEFCENL 312 (588)
T ss_dssp --HHHTHHHHHHHHHT--CSSHHHHHHHHHHHHHHHHTS
T ss_pred --chhHHHHHHHHHhC--CCcHHHHHHHHHHHHHHHHHh
Confidence 01111334433333 337888888887776665543
No 55
>1b3u_A Protein (protein phosphatase PP2A); scaffold protein, phosphorylation, heat repeat; 2.30A {Homo sapiens} SCOP: a.118.1.2 PDB: 2ie4_A* 2ie3_A* 2npp_A* 3k7v_A* 3k7w_A* 3fga_A* 2pf4_A 2iae_A 2nym_A* 2nyl_A* 3dw8_A* 2pkg_A 3c5w_A
Probab=94.20 E-value=0.12 Score=49.33 Aligned_cols=108 Identities=12% Similarity=0.007 Sum_probs=73.0
Q ss_pred CcHHHHHHHHhccChhHHHHHHHHHHHHhcChhhHHHHHhccCcHHHHHHHhcCCCHHHHHHHHHHHHHHhcCCcchhhc
Q 044095 178 GAVGAVIEVVAELDAAAGERALAALELMCTVAEGAEETRAHALAVPVMVTMMGQMAGRGKEYAISVLAVIYGGGDQLVVA 257 (308)
Q Consensus 178 GAVp~LVeLL~~~s~~~~E~ALAiL~~La~~~eGr~aI~~~~gaIp~LV~lLr~gS~~~KE~AVa~L~sLC~~~~~~v~~ 257 (308)
..++.|.+++.|.+......|+..|..++..-.+.. .. ...++.|.+++.+....-|+.|+.+|..++...+...
T Consensus 164 ~l~~~l~~l~~d~~~~VR~~a~~~l~~l~~~~~~~~-~~--~~l~~~l~~~~~d~~~~vr~~a~~~l~~l~~~~~~~~-- 238 (588)
T 1b3u_A 164 ELRQYFRNLCSDDTPMVRRAAASKLGEFAKVLELDN-VK--SEIIPMFSNLASDEQDSVRLLAVEACVNIAQLLPQED-- 238 (588)
T ss_dssp HHHHHHHHHHTCSCHHHHHHHHHHHHHHHHTSCHHH-HH--HTHHHHHHHHHTCSCHHHHTTHHHHHHHHHHHSCHHH--
T ss_pred HHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhcHHh-HH--HHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHhCCHHH--
Confidence 346667777778888889999999999987543322 22 3478899999988889999999999999986433211
Q ss_pred cCCccHHHHHHHHHhCCCCHHHHHHHHHHHHHHHh
Q 044095 258 APPEEVARAVELALQGNCTPRGRRKGTQLLKSLKE 292 (308)
Q Consensus 258 a~~~gv~~Ll~Lllqg~cS~raKrKA~~LLklL~~ 292 (308)
....+.+++.-+. .+.+++.|+.|...|..+..
T Consensus 239 -~~~~~~~~l~~~~-~d~~~~vR~~a~~~l~~l~~ 271 (588)
T 1b3u_A 239 -LEALVMPTLRQAA-EDKSWRVRYMVADKFTELQK 271 (588)
T ss_dssp -HHHHTHHHHHHHH-TCSSHHHHHHHHHTHHHHHH
T ss_pred -HHHHHHHHHHHHc-cCCCHHHHHHHHHHHHHHHH
Confidence 0112222222222 33478888888877776654
No 56
>2qk1_A Protein STU2; STU2P, XMAP215, DIS1, TOG, CH-TOG, heat repeat, microtubule plus END, +TIP, protein binding; 1.70A {Saccharomyces cerevisiae}
Probab=93.61 E-value=0.093 Score=46.98 Aligned_cols=114 Identities=11% Similarity=0.052 Sum_probs=77.0
Q ss_pred cHHHHHHHHhccChhHHHHHHHHHHHHhcChhhHHHHHh-ccCcHHHHHHHhcCCCHHHHHHHHHHHHHHhcCCcc---h
Q 044095 179 AVGAVIEVVAELDAAAGERALAALELMCTVAEGAEETRA-HALAVPVMVTMMGQMAGRGKEYAISVLAVIYGGGDQ---L 254 (308)
Q Consensus 179 AVp~LVeLL~~~s~~~~E~ALAiL~~La~~~eGr~aI~~-~~gaIp~LV~lLr~gS~~~KE~AVa~L~sLC~~~~~---~ 254 (308)
.++.|++.+.+....+++.+.++|..++..-+- .++.. -...++.|...|.....+.|+.++..|..++..... .
T Consensus 105 llp~ll~~l~dkk~~V~~aa~~al~~i~~~~~~-~~~~~~l~~ll~~l~~~l~~k~~~vk~~al~~l~~~~~~~~~~~~~ 183 (249)
T 2qk1_A 105 VFTPLLDRTKEKKPSVIEAIRKALLTICKYYDP-LASSGRNEDMLKDILEHMKHKTPQIRMECTQLFNASMKEEKDGYST 183 (249)
T ss_dssp HHHHHHHGGGCCCHHHHHHHHHHHHHHHHHSCT-TCTTCTTHHHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHCCSCSHH
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHccc-cccCCcHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHcCCcchh
Confidence 588899999888788888888888888863210 11110 123677888888888899999999999999865432 2
Q ss_pred hhccC-CccHHHHHHHHHhCCCCHHHHHHHHHHHHHHHhcCC
Q 044095 255 VVAAP-PEEVARAVELALQGNCTPRGRRKGTQLLKSLKEYGQ 295 (308)
Q Consensus 255 v~~a~-~~gv~~Ll~Lllqg~cS~raKrKA~~LLklL~~~~e 295 (308)
....+ ..-++.+..++-+. ....|+.|.+.|..+.+.-.
T Consensus 184 l~~~l~~~iip~l~~~l~D~--~~~VR~aA~~~l~~i~~~vG 223 (249)
T 2qk1_A 184 LQRYLKDEVVPIVIQIVNDT--QPAIRTIGFESFAILIKIFG 223 (249)
T ss_dssp HHHHHTTTHHHHHHHHHTCS--SHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHhcCC--CHHHHHHHHHHHHHHHHHhC
Confidence 21122 33345555444333 78899999988887776543
No 57
>2vgl_B AP-2 complex subunit beta-1; cytoplasmic vesicle, alternative splicing, endocytosis, lipid-binding, golgi apparatus, adaptor, membrane, transport; HET: IHP; 2.59A {Homo sapiens} SCOP: i.23.1.1 PDB: 2jkt_B 2jkr_B* 2xa7_B 1w63_B
Probab=93.60 E-value=0.063 Score=53.48 Aligned_cols=71 Identities=7% Similarity=0.025 Sum_probs=57.0
Q ss_pred cHHHHHHHHhccChhHHHHHHHHHHHHhcChhhHHHHHhccCcHHHHHHHhcCCCHHHHHHHHHHHHHHhcCCc
Q 044095 179 AVGAVIEVVAELDAAAGERALAALELMCTVAEGAEETRAHALAVPVMVTMMGQMAGRGKEYAISVLAVIYGGGD 252 (308)
Q Consensus 179 AVp~LVeLL~~~s~~~~E~ALAiL~~La~~~eGr~aI~~~~gaIp~LV~lLr~gS~~~KE~AVa~L~sLC~~~~ 252 (308)
.++.|.++|.+.+..+...|+..|..+...... .+-. .+.++.|.++|.+.....+.+|+.+|..+|..+.
T Consensus 122 l~~~l~~~L~d~~~~VRk~A~~al~~i~~~~p~--~~~~-~~~~~~l~~lL~d~d~~V~~~A~~aL~~i~~~~~ 192 (591)
T 2vgl_B 122 LCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQ--MVED-QGFLDSLRDLIADSNPMVVANAVAALSEISESHP 192 (591)
T ss_dssp HHHHHHHHSSCSCHHHHHHHHHHHHHHHHSSCC--CHHH-HHHHHHHHHTTSCSCHHHHHHHHHHHHHHTTSCC
T ss_pred HHHHHHHHcCCCChHHHHHHHHHHHHHHhhChh--hccc-ccHHHHHHHHhCCCChhHHHHHHHHHHHHHhhCC
Confidence 456788888888899999999999998874221 2222 4678999999998899999999999999998764
No 58
>4fdd_A Transportin-1; heat repeats, karyopherin, nuclear import, protein transport importin, transportin, transport protein; 2.30A {Homo sapiens} PDB: 2ot8_A 2h4m_A 2z5k_A 2z5j_A 2qmr_A 2z5m_A 2z5n_A 2z5o_A 1qbk_B*
Probab=93.07 E-value=0.12 Score=52.98 Aligned_cols=173 Identities=6% Similarity=-0.037 Sum_probs=98.7
Q ss_pred hHHHHHHHHhHhccCCCCcccchHHHHHHHhCCCCCCCCCcHHHHHHHhcCC-CCcHHHH----HHhCcHHHHHHHHhcc
Q 044095 116 LQELFHLAELQLSSGSDSDRLAALYLLERSLLPNPPSDQACQPELMRALCLA-ESNRRVA----VEAGAVGAVIEVVAEL 190 (308)
Q Consensus 116 ~~~~f~l~~l~lss~~i~~~~~AI~lLV~LL~~g~~~~k~~a~a~l~aL~~~-~~Nr~~i----V~aGAVp~LVeLL~~~ 190 (308)
.+....++.+.... ..+.-++.++.|++++..+....+..+-.+++.++.. .+.-..- .-.+.++.|++++.+.
T Consensus 108 ~~~a~~i~~ia~~~-~~~~wp~ll~~L~~~l~~~~~~~r~~al~~L~~i~~~~~~~~~~~~~~~~~~~il~~l~~~l~~~ 186 (852)
T 4fdd_A 108 ATVGILITTIASKG-ELQNWPDLLPKLCSLLDSEDYNTCEGAFGALQKICEDSAEILDSDVLDRPLNIMIPKFLQFFKHS 186 (852)
T ss_dssp HHHHHHHHHHHHHT-TTTTCTTHHHHHHHHHSCSSHHHHHHHHHHHHHHHHHHTTHHHHCSSSSCHHHHHHHHTTTTTCS
T ss_pred HHHHHHHHHHHHhc-CccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhHHHhchhhhcchHHHHHHHHHHHhcCC
Confidence 34444444444332 2345568999999999875432221111233344422 1110000 0134577777777777
Q ss_pred ChhHHHHHHHHHHHHhcChhhHHHHHhccCcHHHHHHHhcCCCHHHHHHHHHHHHHHhcCCcchhhccCCccHHHHHHHH
Q 044095 191 DAAAGERALAALELMCTVAEGAEETRAHALAVPVMVTMMGQMAGRGKEYAISVLAVIYGGGDQLVVAAPPEEVARAVELA 270 (308)
Q Consensus 191 s~~~~E~ALAiL~~La~~~eGr~aI~~~~gaIp~LV~lLr~gS~~~KE~AVa~L~sLC~~~~~~v~~a~~~gv~~Ll~Ll 270 (308)
+.++...|+.+|..+.....+ .........++.|++++.+....-|+.|+.+|..|+..........+..-+..++. +
T Consensus 187 ~~~vR~~A~~aL~~~~~~~~~-~~~~~~~~~l~~l~~~~~d~~~~vr~~a~~~L~~l~~~~~~~~~~~l~~l~~~l~~-~ 264 (852)
T 4fdd_A 187 SPKIRSHAVACVNQFIISRTQ-ALMLHIDSFIENLFALAGDEEPEVRKNVCRALVMLLEVRMDRLLPHMHNIVEYMLQ-R 264 (852)
T ss_dssp SHHHHHHHHHHHHTTTTTTCH-HHHTSHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHCHHHHGGGHHHHHHHHHH-H
T ss_pred CHHHHHHHHHHHHHHHhcccH-HHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHH-H
Confidence 888888899888877754332 11111224678888888888999999999999999876544332221211223322 2
Q ss_pred HhCCCCHHHHHHHHHHHHHHHh
Q 044095 271 LQGNCTPRGRRKGTQLLKSLKE 292 (308)
Q Consensus 271 lqg~cS~raKrKA~~LLklL~~ 292 (308)
+ .+..+..|..|.+.+..+.+
T Consensus 265 ~-~~~~~~vr~~a~e~l~~l~~ 285 (852)
T 4fdd_A 265 T-QDQDENVALEACEFWLTLAE 285 (852)
T ss_dssp H-TCSSHHHHHHHHHHHHHHTT
T ss_pred c-cCCcHHHHHHHHHHHHHHhc
Confidence 2 23367778888766655543
No 59
>2qk2_A LP04448P; mini spindles, MSPS, XMAP215, DIS1, STU2, heat repeat, micro plus END, +TIP, protein binding; 2.10A {Drosophila melanogaster}
Probab=92.89 E-value=0.47 Score=41.05 Aligned_cols=102 Identities=13% Similarity=0.122 Sum_probs=71.0
Q ss_pred HHHHHHHHh-ccChhHHHHHHHHHHHHhcChhhHHHHHh-ccCcHHHHHHHhcCCCHHHHHHHHHHHHHHhcCCcchhhc
Q 044095 180 VGAVIEVVA-ELDAAAGERALAALELMCTVAEGAEETRA-HALAVPVMVTMMGQMAGRGKEYAISVLAVIYGGGDQLVVA 257 (308)
Q Consensus 180 Vp~LVeLL~-~~s~~~~E~ALAiL~~La~~~eGr~aI~~-~~gaIp~LV~lLr~gS~~~KE~AVa~L~sLC~~~~~~v~~ 257 (308)
++.|..+|. |.+..+.+.|+.+|..|+..- |. .+.. ....++.|++.+++....-|+.|..+|.+++.... .
T Consensus 58 ~~~L~~~l~kd~~~~V~~~a~~~l~~la~~l-~~-~~~~~~~~ilp~ll~~l~d~~~~vr~~a~~aL~~~~~~~~--~-- 131 (242)
T 2qk2_A 58 VSALKKVITKDSNVVLVAMAGKCLALLAKGL-AK-RFSNYASACVPSLLEKFKEKKPNVVTALREAIDAIYASTS--L-- 131 (242)
T ss_dssp HHHHHHHHHHCSCHHHHHHHHHHHHHHHHHH-GG-GGHHHHHHHHHHHHHGGGCCCHHHHHHHHHHHHHHHTTSC--H--
T ss_pred HHHHHHHhccCCCHHHHHHHHHHHHHHHHHH-hh-hHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHcCC--H--
Confidence 566888885 888888999999999999632 11 1111 12478999999999999999999999999987432 1
Q ss_pred cCCccHHHHHHHHHhCCCCHHHHHHHHHHHHHHH
Q 044095 258 APPEEVARAVELALQGNCTPRGRRKGTQLLKSLK 291 (308)
Q Consensus 258 a~~~gv~~Ll~Lllqg~cS~raKrKA~~LLklL~ 291 (308)
..-+..++..+.+ .+++.|+.+..+|..+-
T Consensus 132 --~~ll~~l~~~l~~--~~~~vr~~~l~~l~~~l 161 (242)
T 2qk2_A 132 --EAQQESIVESLSN--KNPSVKSETALFIARAL 161 (242)
T ss_dssp --HHHHHHHHHHTTC--SCHHHHHHHHHHHHHHH
T ss_pred --HHHHHHHHHHHcC--CChHHHHHHHHHHHHHH
Confidence 1112333332323 38899999888887743
No 60
>3dad_A FH1/FH2 domain-containing protein 1; formin, FHOD1, GTPase-binding domain, ubiquitin-superfold, armadillo repeats, actin-binding, coiled coil; 2.30A {Homo sapiens}
Probab=92.24 E-value=1 Score=43.14 Aligned_cols=112 Identities=16% Similarity=0.122 Sum_probs=82.0
Q ss_pred HHHHHHHHhccChhHHHHHHHHHHH-HhcChhhHHHHHhccCcHHHHHHHhcCCCHHHHHHHHHHHHHHhcCCcc--hhh
Q 044095 180 VGAVIEVVAELDAAAGERALAALEL-MCTVAEGAEETRAHALAVPVMVTMMGQMAGRGKEYAISVLAVIYGGGDQ--LVV 256 (308)
Q Consensus 180 Vp~LVeLL~~~s~~~~E~ALAiL~~-La~~~eGr~aI~~~~gaIp~LV~lLr~gS~~~KE~AVa~L~sLC~~~~~--~v~ 256 (308)
|..+++.|.+++....-++|.-|.. +..+.+=..++++ .+|+..|++++.++...-.-|++.+|.+|-.+.+. -+.
T Consensus 120 a~~iiekL~~~~~~~lr~aLfsLk~~~q~D~~Fa~EFI~-~~GL~~Li~vi~~~~gN~q~Y~L~AL~~LM~~v~Gm~gvv 198 (339)
T 3dad_A 120 VNAILEKLYSSSGPELRRSLFSLKQIFQEDKDLVPEFVH-SEGLSCLIRVGAAADHNYQSYILRALGQLMLFVDGMLGVV 198 (339)
T ss_dssp HHHHHHHHHHCCHHHHHHHHHHHHHHHHTCTTHHHHHHH-TTHHHHHHHHHTTSCHHHHHHHHHHHHHHTTSHHHHHHHH
T ss_pred HHHHHHHHhcCCcHHHHHHHHHHHHHhhcchHHHHHHHH-hccHHHHHHHHHhcChHHHHHHHHHHHHHHhccccccchh
Confidence 4467788887777778889999998 7778888999998 56899999999999999999999999999765322 111
Q ss_pred ccCCccHHHHHHHHHhCCCCHHHHHHHHHHHHHHHhcCC
Q 044095 257 AAPPEEVARAVELALQGNCTPRGRRKGTQLLKSLKEYGQ 295 (308)
Q Consensus 257 ~a~~~gv~~Ll~Lllqg~cS~raKrKA~~LLklL~~~~e 295 (308)
. -..-|-.++.++-.. ....-+.|.+||..+..+.+
T Consensus 199 s-~~~fI~~lyslv~s~--~~~V~k~AL~LL~v~V~~se 234 (339)
T 3dad_A 199 A-HSDTIQWLYTLCASL--SRLVVKTALKLLLVFVEYSE 234 (339)
T ss_dssp H-CHHHHHHHHHGGGCS--CHHHHHHHHHHHHHHHHHCG
T ss_pred C-CHHHHHHHHHHHcCc--cHHHHHHHHHHHHHHHccCc
Confidence 1 111234444444322 56666778888888887765
No 61
>1ibr_B P95, importin beta-1 subunit, nuclear factor; small GTPase, nuclear transport receptor, cell cycle, translation; HET: GNP; 2.30A {Homo sapiens} SCOP: a.118.1.1 PDB: 1m5n_S 1gcj_A 1f59_A 1o6o_A 1o6p_A
Probab=91.89 E-value=0.63 Score=42.82 Aligned_cols=157 Identities=11% Similarity=0.006 Sum_probs=90.3
Q ss_pred cccchHHHHHHHhCCC--CCCCCCcHHHHHHHhcCCC-CcHHHHHHhCcHHHHHHHHhcc--ChhHHHHHHHHHHHHhcC
Q 044095 134 DRLAALYLLERSLLPN--PPSDQACQPELMRALCLAE-SNRRVAVEAGAVGAVIEVVAEL--DAAAGERALAALELMCTV 208 (308)
Q Consensus 134 ~~~~AI~lLV~LL~~g--~~~~k~~a~a~l~aL~~~~-~Nr~~iV~aGAVp~LVeLL~~~--s~~~~E~ALAiL~~La~~ 208 (308)
.-++.++.|++.+..+ ....+..+-.++..|+..- ...-...-...++.|+.+|.+. +..+...|+.+|..+...
T Consensus 125 ~w~~ll~~L~~~l~~~~~~~~~r~~al~~l~~l~~~~~~~~~~~~~~~ll~~l~~~l~~~~~~~~vr~~a~~~l~~~~~~ 204 (462)
T 1ibr_B 125 QWPELIPQLVANVTNPNSTEHMKESTLEAIGYICQDIDPEQLQDKSNEILTAIIQGMRKEEPSNNVKLAATNALLNSLEF 204 (462)
T ss_dssp CCTTHHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHHSCGGGTGGGHHHHHHHHHHHHSTTCCCHHHHHHHHHHHHHHTTT
T ss_pred ccHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHhCCchhhHhHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHH
Confidence 3468999999999765 3212211123444555321 1100111123677888888776 577888899999887653
Q ss_pred hh-hHH-HHHhccCcHHHHHHHhcCCCHHHHHHHHHHHHHHhcCCcchhhccCCccHH-HHHHHHHhCCCCHHHHHHHHH
Q 044095 209 AE-GAE-ETRAHALAVPVMVTMMGQMAGRGKEYAISVLAVIYGGGDQLVVAAPPEEVA-RAVELALQGNCTPRGRRKGTQ 285 (308)
Q Consensus 209 ~e-Gr~-aI~~~~gaIp~LV~lLr~gS~~~KE~AVa~L~sLC~~~~~~v~~a~~~gv~-~Ll~Lllqg~cS~raKrKA~~ 285 (308)
-+ .-. .... .-.++.|.+.+.+....-|+.++.+|..++..........+...+. .++..+. +..+..+..|.+
T Consensus 205 ~~~~~~~~~~~-~~l~~~l~~~~~~~~~~vr~~~~~~l~~l~~~~~~~~~~~~~~~l~~~~~~~~~--~~~~~v~~~a~~ 281 (462)
T 1ibr_B 205 TKANFDKESER-HFIMQVVCEATQCPDTRVRVAALQNLVKIMSLYYQYMETYMGPALFAITIEAMK--SDIDEVALQGIE 281 (462)
T ss_dssp THHHHTSHHHH-HHHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHCGGGCTTTTTTTHHHHHHHHHH--CSSHHHHHHHHH
T ss_pred HHHhhhhhHHH-HHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc--CCchHHHHHHHH
Confidence 21 110 0001 1135666666666788899999999999987654433223331433 3322222 237888888888
Q ss_pred HHHHHHhc
Q 044095 286 LLKSLKEY 293 (308)
Q Consensus 286 LLklL~~~ 293 (308)
.+..+.+.
T Consensus 282 ~l~~~~~~ 289 (462)
T 1ibr_B 282 FWSNVCDE 289 (462)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 77777654
No 62
>1qgr_A Protein (importin beta subunit); transport receptor, nuclear import, heat motif, NLS-binding; 2.30A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qgk_A 2p8q_A 2q5d_A 3lww_A 1ukl_A 2qna_A
Probab=91.75 E-value=0.59 Score=47.06 Aligned_cols=111 Identities=14% Similarity=0.039 Sum_probs=72.4
Q ss_pred CcHHHHHHHHhccChhHHHHHHHHHHHHhcCh--hhHHHHHhccCcHHHHHHHhcCCCHHHHHHHHHHHHHHhcCCcchh
Q 044095 178 GAVGAVIEVVAELDAAAGERALAALELMCTVA--EGAEETRAHALAVPVMVTMMGQMAGRGKEYAISVLAVIYGGGDQLV 255 (308)
Q Consensus 178 GAVp~LVeLL~~~s~~~~E~ALAiL~~La~~~--eGr~aI~~~~gaIp~LV~lLr~gS~~~KE~AVa~L~sLC~~~~~~v 255 (308)
..++.|.+.|.+.+...++.|+.+|..++..- +...... ...++.|++.|.+....-|+.|+.+|..+|.......
T Consensus 366 ~~l~~l~~~l~~~~~~~r~~a~~~l~~i~~~~~~~~~~~~~--~~~l~~l~~~l~d~~~~vr~~a~~~l~~~~~~~~~~~ 443 (876)
T 1qgr_A 366 HVLPFIKEHIKNPDWRYRDAAVMAFGCILEGPEPSQLKPLV--IQAMPTLIELMKDPSVVVRDTAAWTVGRICELLPEAA 443 (876)
T ss_dssp HHHHHHHHHTTCSSHHHHHHHHHHHHHTSSSSCHHHHHHHH--HHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHCGGGT
T ss_pred HHHHHHHHHccCCChHHHHHHHHHHHHHHcCCCHHHHHHHH--HHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHhCchhc
Confidence 34556666666777888999999999998742 2222222 3478999999998899999999999999987543321
Q ss_pred --hccCCccHHHHHHHHHhCCCCHHHHHHHHHHHHHHHhc
Q 044095 256 --VAAPPEEVARAVELALQGNCTPRGRRKGTQLLKSLKEY 293 (308)
Q Consensus 256 --~~a~~~gv~~Ll~Lllqg~cS~raKrKA~~LLklL~~~ 293 (308)
......-+..++.. ++. ..+.|+.|...|..+.+.
T Consensus 444 ~~~~~l~~~l~~l~~~-l~~--~~~v~~~a~~al~~l~~~ 480 (876)
T 1qgr_A 444 INDVYLAPLLQCLIEG-LSA--EPRVASNVCWAFSSLAEA 480 (876)
T ss_dssp SSTTTHHHHHHHHHHH-TTS--CHHHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHH-HcC--CHHHHHHHHHHHHHHHHH
Confidence 01111112333332 333 478888887766666543
No 63
>1ibr_B P95, importin beta-1 subunit, nuclear factor; small GTPase, nuclear transport receptor, cell cycle, translation; HET: GNP; 2.30A {Homo sapiens} SCOP: a.118.1.1 PDB: 1m5n_S 1gcj_A 1f59_A 1o6o_A 1o6p_A
Probab=90.75 E-value=0.85 Score=41.94 Aligned_cols=112 Identities=14% Similarity=0.113 Sum_probs=73.4
Q ss_pred CcHHHHHHHHhcc-------ChhHHHHHHHHHHHHhcChhhHHHHHhccCcHHHHHHHhcCCCHHHHHHHHHHHHHHhcC
Q 044095 178 GAVGAVIEVVAEL-------DAAAGERALAALELMCTVAEGAEETRAHALAVPVMVTMMGQMAGRGKEYAISVLAVIYGG 250 (308)
Q Consensus 178 GAVp~LVeLL~~~-------s~~~~E~ALAiL~~La~~~eGr~aI~~~~gaIp~LV~lLr~gS~~~KE~AVa~L~sLC~~ 250 (308)
..++.|++.|.+. +......|+..|..|+..-. . .+.. ..++.+.+.|.+...+.|+.|+.+|..|+.+
T Consensus 321 ~l~p~l~~~l~~~d~d~~~~~~~~r~~a~~~L~~l~~~~~-~-~~~~--~~~~~l~~~l~~~~~~~r~aal~~l~~l~~~ 396 (462)
T 1ibr_B 321 YLVPILTQTLTKQDENDDDDDWNPCKAAGVCLMLLATCCE-D-DIVP--HVLPFIKEHIKNPDWRYRDAAVMAFGCILEG 396 (462)
T ss_dssp HHHHHHHHHTTCCCSSCCTTCCSHHHHHHHHHHHHHHHTT-T-THHH--HHHHHHHHHTTCSSHHHHHHHHHHHHHTSSS
T ss_pred hccHHHHHHHHhcccccccccchHHHHHHHHHHHHHHhcc-H-HHHH--HHHHHHHHHhcCCChHHHHHHHHHHHHHhcC
Confidence 3566666666532 23466778888888887433 2 2323 3678888888888899999999999999875
Q ss_pred Cc-chhhccCCccHHHHHHHHHhCCCCHHHHHHHHHHHHHHHhcCC
Q 044095 251 GD-QLVVAAPPEEVARAVELALQGNCTPRGRRKGTQLLKSLKEYGQ 295 (308)
Q Consensus 251 ~~-~~v~~a~~~gv~~Ll~Lllqg~cS~raKrKA~~LLklL~~~~e 295 (308)
.. +.....+..-++.++.++... .++.|..|...|..+.+.-.
T Consensus 397 ~~~~~~~~~l~~~~~~l~~~l~d~--~~~Vr~~a~~~l~~~~~~~~ 440 (462)
T 1ibr_B 397 PEPSQLKPLVIQAMPTLIELMKDP--SVVVRDTAAWTVGRICELLP 440 (462)
T ss_dssp SCTTTTCTTTTTHHHHHHHGGGCS--CHHHHHHHHHHHHHHHHHGG
T ss_pred CcHHHHHHHHHHHHHHHHHHhcCC--CHHHHHHHHHHHHHHHHhcc
Confidence 54 222223333344454433333 79999999988888876543
No 64
>2bpt_A Importin beta-1 subunit; nuclear transport, nucleocytoplasmic transport, nuclear trafficking, importin- beta, complex; 1.99A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 2bku_B 3ea5_B* 3nd2_A
Probab=90.40 E-value=0.9 Score=45.58 Aligned_cols=113 Identities=9% Similarity=0.037 Sum_probs=69.7
Q ss_pred CcHHHHHHHHhccChhHHHHHHHHHHHHhcChhh----HHHHHhccCcHHHHHHHhcCCCHHHHHHHHHHHHHHhcCCc-
Q 044095 178 GAVGAVIEVVAELDAAAGERALAALELMCTVAEG----AEETRAHALAVPVMVTMMGQMAGRGKEYAISVLAVIYGGGD- 252 (308)
Q Consensus 178 GAVp~LVeLL~~~s~~~~E~ALAiL~~La~~~eG----r~aI~~~~gaIp~LV~lLr~gS~~~KE~AVa~L~sLC~~~~- 252 (308)
..++.|+..+.+.+....+.++.+|..++..-.. ...+ ...++.|++.|.+. .+-++.|..+|..+|...+
T Consensus 411 ~il~~l~~~l~d~~~~vr~~a~~~l~~l~~~~~~~~~~~~~~---~~~l~~l~~~l~~~-~~v~~~a~~al~~l~~~~~~ 486 (861)
T 2bpt_A 411 QALPSILNLMNDQSLQVKETTAWCIGRIADSVAESIDPQQHL---PGVVQACLIGLQDH-PKVATNCSWTIINLVEQLAE 486 (861)
T ss_dssp HHHHHHHHGGGCSCHHHHHHHHHHHHHHHHHHGGGSCTTTTH---HHHHHHHHHHHTSC-HHHHHHHHHHHHHHHHHHSS
T ss_pred HHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHhhhhcCCHHHH---HHHHHHHHHHhccC-hHHHHHHHHHHHHHHHhccc
Confidence 4778888888888888888888889888864211 1111 23678888888765 7888999999999886422
Q ss_pred ---chhhccCCccHHHHHHHHHhCCCCHHHHHHHHHHHHHHHhcC
Q 044095 253 ---QLVVAAPPEEVARAVELALQGNCTPRGRRKGTQLLKSLKEYG 294 (308)
Q Consensus 253 ---~~v~~a~~~gv~~Ll~Lllqg~cS~raKrKA~~LLklL~~~~ 294 (308)
+.+......-+..++.++.+.+.++..|..|...|..+.+..
T Consensus 487 ~~~~~l~~~~~~il~~L~~~l~~~d~~~~vr~~a~~al~~l~~~~ 531 (861)
T 2bpt_A 487 ATPSPIYNFYPALVDGLIGAANRIDNEFNARASAFSALTTMVEYA 531 (861)
T ss_dssp SSSCGGGGGHHHHHHHHHHHHTCSCCGGGHHHHHHHHHHHHHHHC
T ss_pred ccchhhHHHHHHHHHHHHHHHhCcCcchHHHHHHHHHHHHHHHHc
Confidence 111111111123444333333323667777776666665543
No 65
>1u6g_C TIP120 protein, CAND1; cullin repeat, heat repeat, ring finger, ligase; 3.10A {Homo sapiens} SCOP: a.118.1.2 PDB: 4a0c_A
Probab=88.14 E-value=0.72 Score=49.29 Aligned_cols=151 Identities=9% Similarity=-0.015 Sum_probs=84.8
Q ss_pred chHHHHHHHhCCCCCCCCCcHHHHHHHhcCCCCcHHHHHHhCcHHHHHHHHhccChhHHHHHHHHHHHHhcChhhH----
Q 044095 137 AALYLLERSLLPNPPSDQACQPELMRALCLAESNRRVAVEAGAVGAVIEVVAELDAAAGERALAALELMCTVAEGA---- 212 (308)
Q Consensus 137 ~AI~lLV~LL~~g~~~~k~~a~a~l~aL~~~~~Nr~~iV~aGAVp~LVeLL~~~s~~~~E~ALAiL~~La~~~eGr---- 212 (308)
..++.|++.|...+...+..+...+..|+..-.. . .-.-.++.|++.|.+.+....+.|+.+|..++..-...
T Consensus 48 ~il~~Ll~~L~d~~~~vR~~A~~~L~~l~~~~~~--~-~~~~i~~~Ll~~l~d~~~~vR~~a~~~L~~i~~~l~~~~~~~ 124 (1230)
T 1u6g_C 48 KVVKMILKLLEDKNGEVQNLAVKCLGPLVSKVKE--Y-QVETIVDTLCTNMLSDKEQLRDISSIGLKTVIGELPPASSGS 124 (1230)
T ss_dssp HHHHHHHHHTTCSSHHHHHHHHHHHHHHHTTSCH--H-HHHHHHHHHHHHTTCSSSHHHHHHHHHHHHHHHHCC-----C
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHHHhCCH--H-HHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHhCCCccccc
Confidence 4677788877633222221112233344432111 1 11235667777777777777888888888887632111
Q ss_pred ---HHHHhccCcHHHHHHHhcC-CCHHHHHHHHHHHHHHhcCCcchhhccCCccHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 044095 213 ---EETRAHALAVPVMVTMMGQ-MAGRGKEYAISVLAVIYGGGDQLVVAAPPEEVARAVELALQGNCTPRGRRKGTQLLK 288 (308)
Q Consensus 213 ---~aI~~~~gaIp~LV~lLr~-gS~~~KE~AVa~L~sLC~~~~~~v~~a~~~gv~~Ll~Lllqg~cS~raKrKA~~LLk 288 (308)
... ....++.|++.+.+ ...+.++.|+.+|..+|...+..+......-+..++..+. +.+...|++|...|.
T Consensus 125 ~~~~~~--~~~llp~L~~~l~~~~~~~~~~~al~~l~~~~~~~~~~l~~~~~~ll~~l~~~L~--~~~~~vR~~a~~al~ 200 (1230)
T 1u6g_C 125 ALAANV--CKKITGRLTSAIAKQEDVSVQLEALDIMADMLSRQGGLLVNFHPSILTCLLPQLT--SPRLAVRKRTIIALG 200 (1230)
T ss_dssp CTHHHH--HHHHHHHHHHHHSCCSCHHHHHHHHHHHHHHHHHTCSSCTTTHHHHHHHHGGGGG--CSSHHHHHHHHHHHH
T ss_pred chHHHH--HHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHc--CCcHHHHHHHHHHHH
Confidence 112 23478999999984 7889999999999999964332221111111222322222 236778888877776
Q ss_pred HHHhcC
Q 044095 289 SLKEYG 294 (308)
Q Consensus 289 lL~~~~ 294 (308)
.+....
T Consensus 201 ~l~~~~ 206 (1230)
T 1u6g_C 201 HLVMSC 206 (1230)
T ss_dssp HHTTTC
T ss_pred HHHHhc
Confidence 665543
No 66
>2f31_A Diaphanous protein homolog 1; formin,MDIA1, protein-protein complex, armadillo repeats, structural protein; 2.10A {Mus musculus}
Probab=87.61 E-value=1.1 Score=39.85 Aligned_cols=76 Identities=12% Similarity=0.132 Sum_probs=63.3
Q ss_pred hCcHHHHHHHHhcc-----------ChhHHHHHHHHHHHHhcChhhHHHHHhccCcHHHHHHHhcCCCHHHHHHHHHHHH
Q 044095 177 AGAVGAVIEVVAEL-----------DAAAGERALAALELMCTVAEGAEETRAHALAVPVMVTMMGQMAGRGKEYAISVLA 245 (308)
Q Consensus 177 aGAVp~LVeLL~~~-----------s~~~~E~ALAiL~~La~~~eGr~aI~~~~gaIp~LV~lLr~gS~~~KE~AVa~L~ 245 (308)
.|++..|+++|... +.+....++.-|..|.....|...|.++..+|..|+..|.....+.|..|+.+|.
T Consensus 42 ~~Gl~~L~~~L~~~~~~~~~~~~~~~~~~~~~~l~CLkalmn~~~G~~~vl~~~~~i~~l~~~L~s~~~~~r~~~leLL~ 121 (233)
T 2f31_A 42 AEGLASLLDILKRLHDEKEETSGNYDSRNQHEIIRCLKAFMNNKFGIKTMLETEEGILLLVRAMDPAVPNMMIDAAKLLS 121 (233)
T ss_dssp HHHHHHHHHHHHHHHTCC-----CCHHHHHHHHHHHHHHHTSSHHHHHHHHTSSSHHHHHHTTCCTTSHHHHHHHHHHHH
T ss_pred HhHHHHHHHHHHHHHhcccccchhhhHHHHHHHHHHHHHHhCChHHHHHHHcCcHHHHHHHHHhCCCCchHHHHHHHHHH
Confidence 57788888888521 1234457888999999999999999999999999999998888999999999999
Q ss_pred HHhcCCc
Q 044095 246 VIYGGGD 252 (308)
Q Consensus 246 sLC~~~~ 252 (308)
.||...+
T Consensus 122 ~lc~~~~ 128 (233)
T 2f31_A 122 ALCILPQ 128 (233)
T ss_dssp HHHTCSS
T ss_pred HHHhCCC
Confidence 9998653
No 67
>2qk1_A Protein STU2; STU2P, XMAP215, DIS1, TOG, CH-TOG, heat repeat, microtubule plus END, +TIP, protein binding; 1.70A {Saccharomyces cerevisiae}
Probab=87.11 E-value=1.8 Score=38.51 Aligned_cols=111 Identities=16% Similarity=0.131 Sum_probs=71.4
Q ss_pred HHHHHHHH-hccChhHHHHHHHHHHHHhcChhhHHHHH-hc-cCcHHHHHHHhcCCCHHHHHHHHHHHHHHhcCCcchhh
Q 044095 180 VGAVIEVV-AELDAAAGERALAALELMCTVAEGAEETR-AH-ALAVPVMVTMMGQMAGRGKEYAISVLAVIYGGGDQLVV 256 (308)
Q Consensus 180 Vp~LVeLL-~~~s~~~~E~ALAiL~~La~~~eGr~aI~-~~-~gaIp~LV~lLr~gS~~~KE~AVa~L~sLC~~~~~~v~ 256 (308)
+..|...| .|.+..+++.|+.+|..|+..-.+ ..+. .+ ...++.|++.+.+....-++.|..+|.++|..-.. ..
T Consensus 62 ~~~L~~~l~~D~n~~v~~~A~~al~~la~~l~~-~~f~~~y~~~llp~ll~~l~dkk~~V~~aa~~al~~i~~~~~~-~~ 139 (249)
T 2qk1_A 62 LGIYGHIIQKDANIQAVALAAQSVELICDKLKT-PGFSKDYVSLVFTPLLDRTKEKKPSVIEAIRKALLTICKYYDP-LA 139 (249)
T ss_dssp HHHHHHHHHHCSCHHHHHHHHHHHHHHHHHHCT-TTSCHHHHHHHHHHHHHGGGCCCHHHHHHHHHHHHHHHHHSCT-TC
T ss_pred HHHHHHHhccCCCHHHHHHHHHHHHHHHHhccc-ccccHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHccc-cc
Confidence 55677777 577778889999999999952210 1222 11 23688999999888888999999999999875322 10
Q ss_pred cc--CCccHHHHHHHHHhCCCCHHHHHHHHHHHHHHHhcC
Q 044095 257 AA--PPEEVARAVELALQGNCTPRGRRKGTQLLKSLKEYG 294 (308)
Q Consensus 257 ~a--~~~gv~~Ll~Lllqg~cS~raKrKA~~LLklL~~~~ 294 (308)
.. +..-+..++..+.+. +++.|+-+...|..+.+..
T Consensus 140 ~~~~l~~ll~~l~~~l~~k--~~~vk~~al~~l~~~~~~~ 177 (249)
T 2qk1_A 140 SSGRNEDMLKDILEHMKHK--TPQIRMECTQLFNASMKEE 177 (249)
T ss_dssp TTCTTHHHHHHHHHHTTCS--SHHHHHHHHHHHHHHHHHC
T ss_pred cCCcHHHHHHHHHHHHcCC--ChHHHHHHHHHHHHHHHHc
Confidence 11 112233454433333 7888888876666555443
No 68
>1qgr_A Protein (importin beta subunit); transport receptor, nuclear import, heat motif, NLS-binding; 2.30A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qgk_A 2p8q_A 2q5d_A 3lww_A 1ukl_A 2qna_A
Probab=86.35 E-value=1.1 Score=45.03 Aligned_cols=70 Identities=10% Similarity=0.100 Sum_probs=54.3
Q ss_pred hCcHHHHHHHHhccChhHHHHHHHHHHHHhcChhh----HHHHHhccCcHHHHHHHhcCCCHHHHHHHHHHHHHHhcC
Q 044095 177 AGAVGAVIEVVAELDAAAGERALAALELMCTVAEG----AEETRAHALAVPVMVTMMGQMAGRGKEYAISVLAVIYGG 250 (308)
Q Consensus 177 aGAVp~LVeLL~~~s~~~~E~ALAiL~~La~~~eG----r~aI~~~~gaIp~LV~lLr~gS~~~KE~AVa~L~sLC~~ 250 (308)
...++.|+..|.+.+..+.+.|+.+|..++..-.. ...+ ...++.|++.|.+. .+-|+.|+.+|..++..
T Consensus 407 ~~~l~~l~~~l~d~~~~vr~~a~~~l~~~~~~~~~~~~~~~~l---~~~l~~l~~~l~~~-~~v~~~a~~al~~l~~~ 480 (876)
T 1qgr_A 407 IQAMPTLIELMKDPSVVVRDTAAWTVGRICELLPEAAINDVYL---APLLQCLIEGLSAE-PRVASNVCWAFSSLAEA 480 (876)
T ss_dssp HHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHCGGGTSSTTTH---HHHHHHHHHHTTSC-HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHhCchhcccHHHH---HHHHHHHHHHHcCC-HHHHHHHHHHHHHHHHH
Confidence 45889999999988888999999999999974221 1112 23678888888774 78899999999999864
No 69
>3eg5_B Protein diaphanous homolog 1; protein-protein complex, RHO proteins, formins, armadillo repeat, G-protein, GTPase, alternative splicing; HET: GNP; 2.70A {Mus musculus} SCOP: a.118.1.23 PDB: 1z2c_B*
Probab=85.37 E-value=2.9 Score=40.02 Aligned_cols=76 Identities=12% Similarity=0.132 Sum_probs=64.2
Q ss_pred hCcHHHHHHHHhcc-----------ChhHHHHHHHHHHHHhcChhhHHHHHhccCcHHHHHHHhcCCCHHHHHHHHHHHH
Q 044095 177 AGAVGAVIEVVAEL-----------DAAAGERALAALELMCTVAEGAEETRAHALAVPVMVTMMGQMAGRGKEYAISVLA 245 (308)
Q Consensus 177 aGAVp~LVeLL~~~-----------s~~~~E~ALAiL~~La~~~eGr~aI~~~~gaIp~LV~lLr~gS~~~KE~AVa~L~ 245 (308)
.+.+..|+++|..- +......++.-|..|.....|...|.++..+|..|+..|.....+.|..|+-+|.
T Consensus 108 ~~Gl~~Ll~iL~~~~~~~~~~~~~~d~~~q~~~l~CLkalmN~~~G~~~vl~~~~~i~~l~~~L~s~~~~~~~~aleLL~ 187 (383)
T 3eg5_B 108 AEGLASLLDILKRLHDEKEETSGNYDSRNQHEIIRCLKAFMNNKFGIKTMLETEEGILLLVRAMDPAVPNMMIDAAKLLS 187 (383)
T ss_dssp HHHHHHHHHHHHHHHTCC-------CHHHHHHHHHHHHHHTSSHHHHHHHHTCSSHHHHHHHTCCTTSHHHHHHHHHHHH
T ss_pred HccHHHHHHHHHHHhhccccccchhhHHHHHHHHHHHHHHhcchhhHHHHHcChHHHHHHHHHhCCCchHHHHHHHHHHH
Confidence 56789999998521 1244456888899999999999999999999999999999889999999999999
Q ss_pred HHhcCCc
Q 044095 246 VIYGGGD 252 (308)
Q Consensus 246 sLC~~~~ 252 (308)
.+|...+
T Consensus 188 ~lc~~~~ 194 (383)
T 3eg5_B 188 ALCILPQ 194 (383)
T ss_dssp HHHTCCS
T ss_pred HHHhCcC
Confidence 9998653
No 70
>2vgl_B AP-2 complex subunit beta-1; cytoplasmic vesicle, alternative splicing, endocytosis, lipid-binding, golgi apparatus, adaptor, membrane, transport; HET: IHP; 2.59A {Homo sapiens} SCOP: i.23.1.1 PDB: 2jkt_B 2jkr_B* 2xa7_B 1w63_B
Probab=84.82 E-value=0.76 Score=45.61 Aligned_cols=169 Identities=10% Similarity=0.034 Sum_probs=89.0
Q ss_pred hHHHHHHHHhHhccCCCCcccchHHHHHHHhCCCCCCCCCcHHHHHHHhcCCCC-cHHHHHHhCcHHHHHHHHhccChhH
Q 044095 116 LQELFHLAELQLSSGSDSDRLAALYLLERSLLPNPPSDQACQPELMRALCLAES-NRRVAVEAGAVGAVIEVVAELDAAA 194 (308)
Q Consensus 116 ~~~~f~l~~l~lss~~i~~~~~AI~lLV~LL~~g~~~~k~~a~a~l~aL~~~~~-Nr~~iV~aGAVp~LVeLL~~~s~~~ 194 (308)
-.+..++..++......-+..+.++.|..+|.+..+.-+..+..++..++.... ++...+..+++..|+..|.+.+.-.
T Consensus 139 k~A~~al~~i~~~~p~~~~~~~~~~~l~~lL~d~d~~V~~~A~~aL~~i~~~~~~~~~~~l~~~~~~~Ll~~l~~~~~~~ 218 (591)
T 2vgl_B 139 KTAAVCVAKLHDINAQMVEDQGFLDSLRDLIADSNPMVVANAVAALSEISESHPNSNLLDLNPQNINKLLTALNECTEWG 218 (591)
T ss_dssp HHHHHHHHHHHHSSCCCHHHHHHHHHHHHTTSCSCHHHHHHHHHHHHHHTTSCCSCCSCCCHHHHHHHHHHHHHHCCHHH
T ss_pred HHHHHHHHHHHhhChhhcccccHHHHHHHHhCCCChhHHHHHHHHHHHHHhhCCCccchhccHHHHHHHHHcCCCCCchH
Confidence 556777777766322211223578899999975442222112234445554432 2111122345677777777665555
Q ss_pred HHHHHHHHHHHhcChhhHHHHHhccCcHHHHHHHhcCCCHHHHHHHHHHHHHHhcC---CcchhhccCCccHHHHHHHHH
Q 044095 195 GERALAALELMCTVAEGAEETRAHALAVPVMVTMMGQMAGRGKEYAISVLAVIYGG---GDQLVVAAPPEEVARAVELAL 271 (308)
Q Consensus 195 ~E~ALAiL~~La~~~eGr~aI~~~~gaIp~LV~lLr~gS~~~KE~AVa~L~sLC~~---~~~~v~~a~~~gv~~Ll~Lll 271 (308)
.-..+.+|..++..++ ... ...++.+..+|++.+..-+-.|+.++..+... +.+....+....+..|+. ++
T Consensus 219 q~~il~~l~~l~~~~~--~~~---~~~l~~l~~~l~~~~~~V~~ea~~~i~~l~~~~~~~~~~~~~~~~~~~~~L~~-L~ 292 (591)
T 2vgl_B 219 QIFILDCLSNYNPKDD--REA---QSICERVTPRLSHANSAVVLSAVKVLMKFLELLPKDSDYYNMLLKKLAPPLVT-LL 292 (591)
T ss_dssp HHHHHHHHHTSCCCSH--HHH---HHHHHHHTTCSCSSTTHHHHHHHHHHHHSCCSCCBTTBSHHHHHHHTHHHHHH-HT
T ss_pred HHHHHHHHHHhCCCCh--HHH---HHHHHHHHHHHcCCChHHHHHHHHHHHHHhhccCCCHHHHHHHHHHHHHHHHH-Hh
Confidence 5556666665554322 111 23567777777777778888888888887642 222221111122334442 33
Q ss_pred hCCCCHHHHHHHHHHHHHHHh
Q 044095 272 QGNCTPRGRRKGTQLLKSLKE 292 (308)
Q Consensus 272 qg~cS~raKrKA~~LLklL~~ 292 (308)
.. ....|.-|..-|..+..
T Consensus 293 ~~--d~~vr~~aL~~l~~i~~ 311 (591)
T 2vgl_B 293 SG--EPEVQYVALRNINLIVQ 311 (591)
T ss_dssp TS--CHHHHHHHHHHHHHHHH
T ss_pred cC--CccHHHHHHHHHHHHHH
Confidence 33 56666666655554443
No 71
>3b2a_A TON_1937, putative uncharacterized protein; heat-repeats, hypothetical, unknown function; 2.20A {Thermococcus onnurineus}
Probab=84.31 E-value=3.3 Score=38.28 Aligned_cols=72 Identities=18% Similarity=0.154 Sum_probs=43.7
Q ss_pred CcHHHHHHHHhccChhHHHHHHHHHHHHhcChhhHHHHHhccCcHHHHHHHhcCCCHHHHHHHHHHHHHHhc
Q 044095 178 GAVGAVIEVVAELDAAAGERALAALELMCTVAEGAEETRAHALAVPVMVTMMGQMAGRGKEYAISVLAVIYG 249 (308)
Q Consensus 178 GAVp~LVeLL~~~s~~~~E~ALAiL~~La~~~eGr~aI~~~~gaIp~LV~lLr~gS~~~KE~AVa~L~sLC~ 249 (308)
+++..|++||.+.++.++.+++.+|+.+-...++..........++.+++++++-.++-.=+|+.+|-.|-.
T Consensus 33 ~~l~~L~~LL~dkD~~vk~raL~~LeellK~~~~~l~~~~~e~~Ld~iI~llk~~dEkval~A~r~L~~LLe 104 (265)
T 3b2a_A 33 RALFLILELAGEDDETTRLRAFVALGEILKRADSDLRMMVLERHLDVFINALSQENEKVTIKALRALGYLVK 104 (265)
T ss_dssp HHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTCCSTTHHHHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHhccchHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHc
Confidence 467777788877777778888888877776533322222222356666666665555555555555555543
No 72
>1w63_A Adapter-related protein complex 1 gamma 1 subunit; endocytosis, clathrin adaptor, transport, coated PITS; 4.0A {Mus musculus} SCOP: i.23.1.1
Probab=82.56 E-value=5.6 Score=39.74 Aligned_cols=103 Identities=15% Similarity=0.121 Sum_probs=67.2
Q ss_pred chHHHHHHHhCCCCCCCCCcHHHHHHHhcCCCCcHHHHHHhCcHHHHHHHHhccChhHHHHHHHHHHHHhcChhhHHHHH
Q 044095 137 AALYLLERSLLPNPPSDQACQPELMRALCLAESNRRVAVEAGAVGAVIEVVAELDAAAGERALAALELMCTVAEGAEETR 216 (308)
Q Consensus 137 ~AI~lLV~LL~~g~~~~k~~a~a~l~aL~~~~~Nr~~iV~aGAVp~LVeLL~~~s~~~~E~ALAiL~~La~~~eGr~aI~ 216 (308)
.++..|.++|......-+ -.++.+|...-.....+++ .....++..|.+.+...+.+|+.+|..|+.. ++...
T Consensus 313 ~a~~~L~~~L~~~d~~vr---~~aL~~L~~i~~~~p~~~~-~~~~~i~~~l~d~d~~Ir~~alelL~~l~~~-~nv~~-- 385 (618)
T 1w63_A 313 LAINILGRFLLNNDKNIR---YVALTSLLKTVQTDHNAVQ-RHRSTIVDCLKDLDVSIKRRAMELSFALVNG-NNIRG-- 385 (618)
T ss_dssp HHHHHHHHHHTCSSTTTH---HHHHHHHHHHHHHHHHHHG-GGHHHHHHGGGSSCHHHHHHHHHHHHHHCCS-SSTHH--
T ss_pred HHHHHHHHHHhCCCCchH---HHHHHHHHHHHhhCHHHHH-HHHHHHHHHccCCChhHHHHHHHHHHHHccc-ccHHH--
Confidence 467777787765433222 2444444422223333443 2556777778888888999999999999874 33222
Q ss_pred hccCcHHHHHHHhcCCCHHHHHHHHHHHHHHhcC
Q 044095 217 AHALAVPVMVTMMGQMAGRGKEYAISVLAVIYGG 250 (308)
Q Consensus 217 ~~~gaIp~LV~lLr~gS~~~KE~AVa~L~sLC~~ 250 (308)
.+..|.+.+.+....-|+.++..+..+|..
T Consensus 386 ----iv~eL~~~l~~~d~e~r~~~v~~I~~la~k 415 (618)
T 1w63_A 386 ----MMKELLYFLDSCEPEFKADCASGIFLAAEK 415 (618)
T ss_dssp ----HHHHHHHHHHHCCHHHHHHHHHHHHHHHHS
T ss_pred ----HHHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Confidence 245677777777888889999999999874
No 73
>2vgl_A Adaptor protein complex AP-2, alpha 2 subunit; cytoplasmic vesicle, alternative splicing, endocytosis, lipid-binding, golgi apparatus, adaptor, membrane, transport; HET: IHP; 2.59A {Rattus norvegicus} PDB: 2xa7_A 2jkr_A 2jkt_A
Probab=82.27 E-value=1.6 Score=44.10 Aligned_cols=89 Identities=8% Similarity=0.038 Sum_probs=64.3
Q ss_pred HHHHHHhcCCCCcHHHHHHhCcHHHHHHHH--hccChhHHHHHHHHHHHHhcChhhHHHHHhccCcHHHHHHHhcCCCHH
Q 044095 158 PELMRALCLAESNRRVAVEAGAVGAVIEVV--AELDAAAGERALAALELMCTVAEGAEETRAHALAVPVMVTMMGQMAGR 235 (308)
Q Consensus 158 ~a~l~aL~~~~~Nr~~iV~aGAVp~LVeLL--~~~s~~~~E~ALAiL~~La~~~eGr~aI~~~~gaIp~LV~lLr~gS~~ 235 (308)
+.+++.||... + ..++ .-.++.+.++| .+.+......|+-.+..+..... +.+ ...+.+..|.++|.+....
T Consensus 129 ~lALr~L~~i~-~-~e~~-~~l~~~v~~~l~~~d~~~~VRK~A~~al~kl~~~~p--~~~-~~~~~~~~l~~lL~d~d~~ 202 (621)
T 2vgl_A 129 GLALHCIANVG-S-REMA-EAFAGEIPKILVAGDTMDSVKQSAALCLLRLYRTSP--DLV-PMGDWTSRVVHLLNDQHLG 202 (621)
T ss_dssp HHHHHHHHHHC-C-HHHH-HHHTTHHHHHHHCSSSCHHHHHHHHHHHHHHHHHCG--GGC-CCCSCHHHHHHHTTCSCHH
T ss_pred HHHHHHhhccC-C-HHHH-HHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhCh--hhc-CchhHHHHHHHHhCCCCcc
Confidence 45666666432 1 1233 35677888888 77888888888888888876322 222 2247899999999888899
Q ss_pred HHHHHHHHHHHHhcCCc
Q 044095 236 GKEYAISVLAVIYGGGD 252 (308)
Q Consensus 236 ~KE~AVa~L~sLC~~~~ 252 (308)
.+.+|+.+|..+|..+.
T Consensus 203 V~~~a~~~l~~i~~~~~ 219 (621)
T 2vgl_A 203 VVTAATSLITTLAQKNP 219 (621)
T ss_dssp HHHHHHHHHHHHHHHCH
T ss_pred HHHHHHHHHHHHHHhCh
Confidence 99999999999998664
No 74
>2bnx_A Diaphanous protein homolog 1; autoinhibition, actin, nucleation, cytoskeleton, structural; 2.4A {Mus musculus} SCOP: a.118.1.23 PDB: 3o4x_A 3obv_A* 2bap_B
Probab=79.41 E-value=4.1 Score=38.98 Aligned_cols=76 Identities=12% Similarity=0.132 Sum_probs=62.5
Q ss_pred hCcHHHHHHHHhcc-----------ChhHHHHHHHHHHHHhcChhhHHHHHhccCcHHHHHHHhcCCCHHHHHHHHHHHH
Q 044095 177 AGAVGAVIEVVAEL-----------DAAAGERALAALELMCTVAEGAEETRAHALAVPVMVTMMGQMAGRGKEYAISVLA 245 (308)
Q Consensus 177 aGAVp~LVeLL~~~-----------s~~~~E~ALAiL~~La~~~eGr~aI~~~~gaIp~LV~lLr~gS~~~KE~AVa~L~ 245 (308)
.|++..|+++|... +....-.++.-|..|.....|...|..+..+|..|+..|.....+.|..++.+|.
T Consensus 46 ~~Gl~~Ll~~L~~~~~~~~~~~~~~d~~~~~~~l~CLkalmN~~~Gl~~vl~~~~~i~~l~~sL~s~~~~~r~~vleLL~ 125 (386)
T 2bnx_A 46 AEGLASLLDILKRLHDEKEETSGNYDSRNQHEIIRCLKAFMNNKFGIKTMLETEEGILLLVRAMDPAVPNMMIDAAKLLS 125 (386)
T ss_dssp HHHHHHHHHHHHHHHTCCTTTCCTTHHHHHHHHHHHHHHHTSSHHHHHHHHHSSSHHHHHHHTCCTTSHHHHHHHHHHHH
T ss_pred HhHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHhCCHHHHHHHHcCcHHHHHHHHHhCCCCchHHHHHHHHHH
Confidence 56788888888521 1233456888899999999999999999999999999998888899999999999
Q ss_pred HHhcCCc
Q 044095 246 VIYGGGD 252 (308)
Q Consensus 246 sLC~~~~ 252 (308)
.||...+
T Consensus 126 alc~~~~ 132 (386)
T 2bnx_A 126 ALCILPQ 132 (386)
T ss_dssp HHHTCCS
T ss_pred HHHcCCC
Confidence 9998653
No 75
>1u6g_C TIP120 protein, CAND1; cullin repeat, heat repeat, ring finger, ligase; 3.10A {Homo sapiens} SCOP: a.118.1.2 PDB: 4a0c_A
Probab=79.23 E-value=1.4 Score=46.97 Aligned_cols=110 Identities=10% Similarity=0.042 Sum_probs=67.2
Q ss_pred cHHHHHHHHhccChhHHHHHHHHHHHHhcChhhHHHHHhccCcHHHHHHHhcCCC-HHHHHHHHHHHHHHhcCCcchhhc
Q 044095 179 AVGAVIEVVAELDAAAGERALAALELMCTVAEGAEETRAHALAVPVMVTMMGQMA-GRGKEYAISVLAVIYGGGDQLVVA 257 (308)
Q Consensus 179 AVp~LVeLL~~~s~~~~E~ALAiL~~La~~~eGr~aI~~~~gaIp~LV~lLr~gS-~~~KE~AVa~L~sLC~~~~~~v~~ 257 (308)
.++.|+..|.+.+....+.|+..|..++...+.. + ....|+.|++.|.... ...|..|+.+|..|+...+.....
T Consensus 176 ll~~l~~~L~~~~~~vR~~a~~al~~l~~~~~~~--~--~~~~l~~l~~~L~~~~~~~~r~~a~~~l~~l~~~~~~~~~~ 251 (1230)
T 1u6g_C 176 ILTCLLPQLTSPRLAVRKRTIIALGHLVMSCGNI--V--FVDLIEHLLSELSKNDSMSTTRTYIQCIAAISRQAGHRIGE 251 (1230)
T ss_dssp HHHHHGGGGGCSSHHHHHHHHHHHHHHTTTC--------CTTHHHHHHHHHHHTCSSCSCTTHHHHHHHHHHHSSGGGTT
T ss_pred HHHHHHHHHcCCcHHHHHHHHHHHHHHHHhcCHH--H--HHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHhHHHHHH
Confidence 4455666666667788999999999999754322 2 2346888988887542 345566788888887654433322
Q ss_pred cCCccHHHHHHHHHhCCCCHHHHHHHHHHHHHHHhcC
Q 044095 258 APPEEVARAVELALQGNCTPRGRRKGTQLLKSLKEYG 294 (308)
Q Consensus 258 a~~~gv~~Ll~Lllqg~cS~raKrKA~~LLklL~~~~ 294 (308)
.+..-+..++.. ++ +..+..|+.|...|..+.+..
T Consensus 252 ~l~~l~~~ll~~-l~-d~~~~vR~~a~~~l~~l~~~~ 286 (1230)
T 1u6g_C 252 YLEKIIPLVVKF-CN-VDDDELREYCIQAFESFVRRC 286 (1230)
T ss_dssp SCTTHHHHHHHH-HS-SCCTTTHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHH-hc-CCCHHHHHHHHHHHHHHHHHC
Confidence 223323444333 32 336777788887777766643
No 76
>2bpt_A Importin beta-1 subunit; nuclear transport, nucleocytoplasmic transport, nuclear trafficking, importin- beta, complex; 1.99A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 2bku_B 3ea5_B* 3nd2_A
Probab=77.26 E-value=7 Score=39.08 Aligned_cols=110 Identities=8% Similarity=0.071 Sum_probs=62.2
Q ss_pred HHHHHHHHhccCh-hHHHHHHHHHHHHhcChhh--HHHHHhccCcHHHHHHHhcCCCHHHHHHHHHHHHHHhcCCcchhh
Q 044095 180 VGAVIEVVAELDA-AAGERALAALELMCTVAEG--AEETRAHALAVPVMVTMMGQMAGRGKEYAISVLAVIYGGGDQLVV 256 (308)
Q Consensus 180 Vp~LVeLL~~~s~-~~~E~ALAiL~~La~~~eG--r~aI~~~~gaIp~LV~lLr~gS~~~KE~AVa~L~sLC~~~~~~v~ 256 (308)
++.+++++.+.+. ...+.++..+..|+..-+. ...+ ...++.|++.|.....+-+..|+.+|-.|+...++...
T Consensus 599 ~~~l~~~l~~~~~~~v~~~~~~~l~~l~~~~~~~~~~~l---~~i~~~l~~~l~~~~~~vr~~a~~~l~~l~~~~~~~~~ 675 (861)
T 2bpt_A 599 MGLFFRLLEKKDSAFIEDDVFYAISALAASLGKGFEKYL---ETFSPYLLKALNQVDSPVSITAVGFIADISNSLEEDFR 675 (861)
T ss_dssp HHHHHHHHHSTTGGGTHHHHHHHHHHHHHHHGGGGHHHH---HHHHHHHHHHHHCTTSHHHHHHHHHHHHHHHHTGGGGH
T ss_pred HHHHHHHHccCCCCcHHHHHHHHHHHHHHHHhhhHHHHH---HHHHHHHHHHhccccHHHHHHHHHHHHHHHHHhchhcc
Confidence 3444555555444 6778888888888764221 1112 23678888888766677888899999888875443221
Q ss_pred ccCCccHHHHHHHHHhCCCCHHHHHHHHHHHHHHHh
Q 044095 257 AAPPEEVARAVELALQGNCTPRGRRKGTQLLKSLKE 292 (308)
Q Consensus 257 ~a~~~gv~~Ll~Lllqg~cS~raKrKA~~LLklL~~ 292 (308)
.....-+..++..+...+.....|+.|...|..+..
T Consensus 676 ~~~~~l~~~l~~~l~~~~~~~~vr~~~~~~l~~l~~ 711 (861)
T 2bpt_A 676 RYSDAMMNVLAQMISNPNARRELKPAVLSVFGDIAS 711 (861)
T ss_dssp HHHHHHHHHHHHHHHCTTCCTTHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHhCCccccHhhhHHHHHHHHHHHH
Confidence 111111233333333321125667777666655443
No 77
>1w63_A Adapter-related protein complex 1 gamma 1 subunit; endocytosis, clathrin adaptor, transport, coated PITS; 4.0A {Mus musculus} SCOP: i.23.1.1
Probab=71.43 E-value=26 Score=34.81 Aligned_cols=69 Identities=13% Similarity=0.059 Sum_probs=54.2
Q ss_pred CcHHHHHHHHhccChhHHHHHHHHHHHHhcChhhHHHHHhccCcHHHHHHHhcCCCHHHHHHHHHHHHHHhcCC
Q 044095 178 GAVGAVIEVVAELDAAAGERALAALELMCTVAEGAEETRAHALAVPVMVTMMGQMAGRGKEYAISVLAVIYGGG 251 (308)
Q Consensus 178 GAVp~LVeLL~~~s~~~~E~ALAiL~~La~~~eGr~aI~~~~gaIp~LV~lLr~gS~~~KE~AVa~L~sLC~~~ 251 (308)
.++..|..+|.+.+.+.+.-|+..|..++... ...+ . .....++..|.+....-|..|+.+|+.||...
T Consensus 313 ~a~~~L~~~L~~~d~~vr~~aL~~L~~i~~~~--p~~~-~--~~~~~i~~~l~d~d~~Ir~~alelL~~l~~~~ 381 (618)
T 1w63_A 313 LAINILGRFLLNNDKNIRYVALTSLLKTVQTD--HNAV-Q--RHRSTIVDCLKDLDVSIKRRAMELSFALVNGN 381 (618)
T ss_dssp HHHHHHHHHHTCSSTTTHHHHHHHHHHHHHHH--HHHH-G--GGHHHHHHGGGSSCHHHHHHHHHHHHHHCCSS
T ss_pred HHHHHHHHHHhCCCCchHHHHHHHHHHHHhhC--HHHH-H--HHHHHHHHHccCCChhHHHHHHHHHHHHcccc
Confidence 57888999988878888888999998888642 2233 2 24678888888888889999999999998753
No 78
>4ffb_C Protein STU2; tubulin fold, heat repeats, cytoskeleton, microtubule, tubul domain, hydrolase; HET: GTP; 2.88A {Saccharomyces cerevisiae}
Probab=71.08 E-value=8.4 Score=33.98 Aligned_cols=116 Identities=11% Similarity=0.148 Sum_probs=68.1
Q ss_pred HHHHHhCcHHHHHHH-HhccChhHHHHHHHHHHHHhcChhhHHHHHhccCcHHHHHHHhcCCCHHHHHHHHHHHHHHhcC
Q 044095 172 RVAVEAGAVGAVIEV-VAELDAAAGERALAALELMCTVAEGAEETRAHALAVPVMVTMMGQMAGRGKEYAISVLAVIYGG 250 (308)
Q Consensus 172 ~~iV~aGAVp~LVeL-L~~~s~~~~E~ALAiL~~La~~~eGr~aI~~~~gaIp~LV~lLr~gS~~~KE~AVa~L~sLC~~ 250 (308)
....-...++.|++- |.+.....++.|+.+|..++........ .+..|+..+..-+++.+..++..|..+-..
T Consensus 96 ~~~~~~~~l~~lveK~l~~~k~~~~~~a~~~l~~~~~~~~~~~~------~~e~l~~~l~~Knpkv~~~~l~~l~~~l~~ 169 (278)
T 4ffb_C 96 NITLISTWTPLLVEKGLTSSRATTKTQSMSCILSLCGLDTSITQ------SVELVIPFFEKKLPKLIAAAANCVYELMAA 169 (278)
T ss_dssp HHHHHHHHHHHHHHHTSSCCCHHHHHHHHHHHHHHHHTSSSSHH------HHHHHGGGGGCSCHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHhcCcHHH------HHHHHHHHHhccCHHHHHHHHHHHHHHHHH
Confidence 334456678888886 6677777888888888777643221111 234445556667899999999888877543
Q ss_pred Ccchhhc---cCCccHHHHHHHHHhCCCCHHHHHHHHHHHHHHHhcCC
Q 044095 251 GDQLVVA---APPEEVARAVELALQGNCTPRGRRKGTQLLKSLKEYGQ 295 (308)
Q Consensus 251 ~~~~v~~---a~~~gv~~Ll~Lllqg~cS~raKrKA~~LLklL~~~~e 295 (308)
-+..... .+..-+..+..++ ++.+...|+.|..++-.|.++-.
T Consensus 170 fg~~~~~~k~~l~~i~~~l~k~l--~d~~~~VR~aA~~l~~~ly~~~G 215 (278)
T 4ffb_C 170 FGLTNVNVQTFLPELLKHVPQLA--GHGDRNVRSQTMNLIVEIYKVTG 215 (278)
T ss_dssp HTTTTCCHHHHHHHHGGGHHHHH--TCSSHHHHHHHHHHHHHHHTC--
T ss_pred hCCCcCCchhHHHHHHHHHHHHH--hCCcHHHHHHHHHHHHHHHHHhC
Confidence 2211100 0000111222223 34478888888888888877654
No 79
>2vgl_A Adaptor protein complex AP-2, alpha 2 subunit; cytoplasmic vesicle, alternative splicing, endocytosis, lipid-binding, golgi apparatus, adaptor, membrane, transport; HET: IHP; 2.59A {Rattus norvegicus} PDB: 2xa7_A 2jkr_A 2jkt_A
Probab=69.93 E-value=26 Score=35.18 Aligned_cols=100 Identities=18% Similarity=0.145 Sum_probs=64.2
Q ss_pred HHHHHHHHhccChhHHHHHHHHHHHHhcChhhHHHHHhccCcHHHHHHHh--cCCCHHHHHHHHHHHHHHhcCCcchhhc
Q 044095 180 VGAVIEVVAELDAAAGERALAALELMCTVAEGAEETRAHALAVPVMVTMM--GQMAGRGKEYAISVLAVIYGGGDQLVVA 257 (308)
Q Consensus 180 Vp~LVeLL~~~s~~~~E~ALAiL~~La~~~eGr~aI~~~~gaIp~LV~lL--r~gS~~~KE~AVa~L~sLC~~~~~~v~~ 257 (308)
|..|..=|.+.+...+..||..|..+.. + ++.+ ..++.+.+.| .+.++--|+.|+.+|+.++..+.+.+.
T Consensus 113 iN~l~kDl~~~n~~ir~lALr~L~~i~~-~----e~~~--~l~~~v~~~l~~~d~~~~VRK~A~~al~kl~~~~p~~~~- 184 (621)
T 2vgl_A 113 NNAIKNDLASRNPTFMGLALHCIANVGS-R----EMAE--AFAGEIPKILVAGDTMDSVKQSAALCLLRLYRTSPDLVP- 184 (621)
T ss_dssp HHHHHHHHHSCCHHHHHHHHHHHHHHCC-H----HHHH--HHTTHHHHHHHCSSSCHHHHHHHHHHHHHHHHHCGGGCC-
T ss_pred HHHHHHhcCCCCHHHHHHHHHHhhccCC-H----HHHH--HHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhChhhcC-
Confidence 4444445556677778889999999865 2 2444 3578889999 778999999999999999986654331
Q ss_pred cCCcc-HHHHHHHHHhCCCCHHHHHHHHHHHHHHH
Q 044095 258 APPEE-VARAVELALQGNCTPRGRRKGTQLLKSLK 291 (308)
Q Consensus 258 a~~~g-v~~Ll~Lllqg~cS~raKrKA~~LLklL~ 291 (308)
.++ +..+..++ .|.+...+.-|..+|.-+.
T Consensus 185 --~~~~~~~l~~lL--~d~d~~V~~~a~~~l~~i~ 215 (621)
T 2vgl_A 185 --MGDWTSRVVHLL--NDQHLGVVTAATSLITTLA 215 (621)
T ss_dssp --CCSCHHHHHHHT--TCSCHHHHHHHHHHHHHHH
T ss_pred --chhHHHHHHHHh--CCCCccHHHHHHHHHHHHH
Confidence 123 33443333 2225555555555544443
No 80
>3b2a_A TON_1937, putative uncharacterized protein; heat-repeats, hypothetical, unknown function; 2.20A {Thermococcus onnurineus}
Probab=69.32 E-value=45 Score=30.72 Aligned_cols=143 Identities=17% Similarity=0.135 Sum_probs=75.5
Q ss_pred chHHHHHHHhCCCCCCCCCcHHHHHHH---hc-CCCCcHHHHHHhCcHHHHHHHHhccChhHHHHHHHHHHHHhcC-hhh
Q 044095 137 AALYLLERSLLPNPPSDQACQPELMRA---LC-LAESNRRVAVEAGAVGAVIEVVAELDAAAGERALAALELMCTV-AEG 211 (308)
Q Consensus 137 ~AI~lLV~LL~~g~~~~k~~a~a~l~a---L~-~~~~Nr~~iV~aGAVp~LVeLL~~~s~~~~E~ALAiL~~La~~-~eG 211 (308)
+++..|..||.+....-+ -.++.. +- ..++-..+..=....+.+++++.+.++...=+|+.+|..|-.. +=.
T Consensus 33 ~~l~~L~~LL~dkD~~vk---~raL~~LeellK~~~~~l~~~~~e~~Ld~iI~llk~~dEkval~A~r~L~~LLe~vpL~ 109 (265)
T 3b2a_A 33 RALFLILELAGEDDETTR---LRAFVALGEILKRADSDLRMMVLERHLDVFINALSQENEKVTIKALRALGYLVKDVPMG 109 (265)
T ss_dssp HHHHHHHHHTTSSCHHHH---HHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTCCSTTHHHHHHHHHHHHHHHTTCCBC
T ss_pred hHHHHHHHHHhccchHHH---HHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHcCCCCC
Confidence 577788888865432222 122222 21 2222222333334567777777777777777777777777664 223
Q ss_pred HHHHHhccCcHHHHHHHhcCCCHHHHHHHHHHHHHHhcCCcchhhccCCccHH-HHHHHHHhCCCCHHHHHHHHHHHHHH
Q 044095 212 AEETRAHALAVPVMVTMMGQMAGRGKEYAISVLAVIYGGGDQLVVAAPPEEVA-RAVELALQGNCTPRGRRKGTQLLKSL 290 (308)
Q Consensus 212 r~aI~~~~gaIp~LV~lLr~gS~~~KE~AVa~L~sLC~~~~~~v~~a~~~gv~-~Ll~Lllqg~cS~raKrKA~~LLklL 290 (308)
...... .+.+|++++.++.+--.|+|+-+|-.|-.- .....+. -+..|+ .+ .+.+.|-.|-.+|-.+
T Consensus 110 ~~~y~K---l~~aL~dlik~~~~il~~eaae~Lgklkv~-------~~~~~V~~~l~sLl-~S-kd~~vK~agl~~L~ei 177 (265)
T 3b2a_A 110 SKTFLK---AAKTLVSLLESPDDMMRIETIDVLSKLQPL-------EDSKLVRTYINELV-VS-PDLYTKVAGFCLFLNM 177 (265)
T ss_dssp HHHHHH---HHHHHHHHTTSCCHHHHHHHHHHHHHCCBS-------CCCHHHHHHHHHHH-TC-SSHHHHHHHHHHHHHH
T ss_pred HHHHHH---HHHHHHHHhcCCCchHHHHHHHHhCcCCcc-------cchHHHHHHHHHHH-hC-CChhHHHHHHHHHHHh
Confidence 333323 356677777777777777777777766111 1112222 333333 22 2566666665555444
Q ss_pred HhcC
Q 044095 291 KEYG 294 (308)
Q Consensus 291 ~~~~ 294 (308)
....
T Consensus 178 a~~S 181 (265)
T 3b2a_A 178 LNSS 181 (265)
T ss_dssp GGGC
T ss_pred hccc
Confidence 4433
No 81
>1ho8_A Vacuolar ATP synthase subunit H; heat repeat, hydrolase; 2.95A {Saccharomyces cerevisiae} SCOP: a.118.1.9
Probab=67.31 E-value=19 Score=35.82 Aligned_cols=136 Identities=11% Similarity=0.036 Sum_probs=88.0
Q ss_pred HHHHHhcCCCCcHHHHHHhC--cHHHHHHHHhcc-----------------ChhHHHHHHHHHHHHhcChhhHHHHHhcc
Q 044095 159 ELMRALCLAESNRRVAVEAG--AVGAVIEVVAEL-----------------DAAAGERALAALELMCTVAEGAEETRAHA 219 (308)
Q Consensus 159 a~l~aL~~~~~Nr~~iV~aG--AVp~LVeLL~~~-----------------s~~~~E~ALAiL~~La~~~eGr~aI~~~~ 219 (308)
..+..|...++.|..+++++ .|+.|++++... .-.+.-+++-.+..|+-.++..+.+.. .
T Consensus 190 ~~L~~Ll~~~~~R~~f~~~~~~~~~~l~~il~~~~~~~~~~~~~~~~~~~~~~Ql~Y~~ll~iWlLSF~~~~~~~l~~-~ 268 (480)
T 1ho8_A 190 RLLQELAVIPEYRDVIWLHEKKFMPTLFKILQRATDSQLATRIVATNSNHLGIQLQYHSLLLIWLLTFNPVFANELVQ-K 268 (480)
T ss_dssp HHHHHHHTSHHHHHHHHTTHHHHHHHHHHHHHHHHC-------------CCHHHHHHHHHHHHHHHTTSHHHHHHHHT-T
T ss_pred HHHHHHhcchhHHHHHHHcccchhHHHHHHHHHhhccccccccccccCCCccHHHHHHHHHHHHHHHcCHHHHHHHHh-c
Confidence 34456778888999888754 478887766521 122356788899999999888888865 3
Q ss_pred CcH--HHHHHHhcCC-CHHHHHHHHHHHHHHhcCCc----chhh-ccCCccHHHHHHHHHhCCC-CHHHHHHHHHHHHHH
Q 044095 220 LAV--PVMVTMMGQM-AGRGKEYAISVLAVIYGGGD----QLVV-AAPPEEVARAVELALQGNC-TPRGRRKGTQLLKSL 290 (308)
Q Consensus 220 gaI--p~LV~lLr~g-S~~~KE~AVa~L~sLC~~~~----~~v~-~a~~~gv~~Ll~Lllqg~c-S~raKrKA~~LLklL 290 (308)
+.+ ..|+++++.. -++-..-++++|.||...+. ..+. .++.+.+...+..+.+... .+...+.-..|.+.|
T Consensus 269 ~i~~~~~L~~i~k~s~KEKvvRv~la~l~Nll~~~~~~~~~~~~~~~~~~~~l~~l~~L~~rk~~Dedl~edl~~L~e~L 348 (480)
T 1ho8_A 269 YLSDFLDLLKLVKITIKEKVSRLCISIILQCCSTRVKQHKKVIKQLLLLGNALPTVQSLSERKYSDEELRQDISNLKEIL 348 (480)
T ss_dssp SHHHHHHHHHHHHHCCSHHHHHHHHHHHHHTTSSSSTTHHHHHHHHHHHHCHHHHHHHHHSSCCSSHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHhhccchhHHHHHHHHHHHhcccchhhhhHHHHHHHHccchHHHHHHhhCCCCcHHHHHHHHHHHHHH
Confidence 433 6788888874 67777888899999876542 1122 1222334444444544332 466677777777777
Q ss_pred HhcCC
Q 044095 291 KEYGQ 295 (308)
Q Consensus 291 ~~~~e 295 (308)
.+..+
T Consensus 349 ~~~~~ 353 (480)
T 1ho8_A 349 ENEYQ 353 (480)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 76544
No 82
>4ffb_C Protein STU2; tubulin fold, heat repeats, cytoskeleton, microtubule, tubul domain, hydrolase; HET: GTP; 2.88A {Saccharomyces cerevisiae}
Probab=63.66 E-value=33 Score=30.02 Aligned_cols=71 Identities=14% Similarity=0.159 Sum_probs=48.3
Q ss_pred HHHHHHHHhccChhHHHHHHHHHHHHhcCh---hh-HHHH-HhccCcHHHHHHH-hcCCCHHHHHHHHHHHHHHhcC
Q 044095 180 VGAVIEVVAELDAAAGERALAALELMCTVA---EG-AEET-RAHALAVPVMVTM-MGQMAGRGKEYAISVLAVIYGG 250 (308)
Q Consensus 180 Vp~LVeLL~~~s~~~~E~ALAiL~~La~~~---eG-r~aI-~~~~gaIp~LV~l-Lr~gS~~~KE~AVa~L~sLC~~ 250 (308)
++.+-..+.|.+-.+.+.++.+|..++..- .+ +... .-....++.|++. |.+...+.++.|+.+|..++..
T Consensus 57 ~~~lkk~l~DsN~~v~~~al~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~lveK~l~~~k~~~~~~a~~~l~~~~~~ 133 (278)
T 4ffb_C 57 PTLFAQYITDSNVVAQEQAIVALNSLIDAFASSSLKNAHNITLISTWTPLLVEKGLTSSRATTKTQSMSCILSLCGL 133 (278)
T ss_dssp THHHHHHTTCSSHHHHHHHHHHHHHHHTTCC---CCHHHHHHHHHHHHHHHHHHTSSCCCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHhccchHHHHHHHHHHHHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHh
Confidence 344555667888888899999999887631 11 1111 1113467888876 6677888999999999888754
No 83
>1jer_A Cucumber stellacyanin; electron transport, copper, glycoprotein, hydroxylation; 1.60A {Cucumis sativus} SCOP: b.6.1.1
Probab=63.25 E-value=1.3 Score=37.01 Aligned_cols=14 Identities=29% Similarity=0.660 Sum_probs=12.0
Q ss_pred CCcccccccccccc
Q 044095 13 RPLFSCGFFCHCTQ 26 (308)
Q Consensus 13 ~~~~~~~~~~~~~~ 26 (308)
.-.|-||+=.||.+
T Consensus 85 ~~YFicg~~gHC~~ 98 (138)
T 1jer_A 85 MHYFVCTVGTHCSN 98 (138)
T ss_dssp EEEEECCSTTTGGG
T ss_pred CEEEEcCCCCcccc
Confidence 45799999999976
No 84
>1vdy_A Hypothetical protein (RAFL09-17-B18); structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Arabidopsis thaliana} PDB: 2dcp_A
Probab=60.69 E-value=14 Score=30.93 Aligned_cols=74 Identities=7% Similarity=0.056 Sum_probs=49.7
Q ss_pred cHHHHHHHhcCCCHHHHHHHHHHHHHHhcCCcchhhccCCccHHHHHHHHH--h-------CC-CCHHHHHHHHHHHHHH
Q 044095 221 AVPVMVTMMGQMAGRGKEYAISVLAVIYGGGDQLVVAAPPEEVARAVELAL--Q-------GN-CTPRGRRKGTQLLKSL 290 (308)
Q Consensus 221 aIp~LV~lLr~gS~~~KE~AVa~L~sLC~~~~~~v~~a~~~gv~~Ll~Lll--q-------g~-cS~raKrKA~~LLklL 290 (308)
.+..|.+.|.+.+...|-.|+.+|-.||.++.+.++..++..+..+ ..+. + |+ -....|++|.+|+++|
T Consensus 50 im~~L~kRL~~k~~~vk~KaL~lL~yL~~~Gs~~f~~~~r~~~~~I-k~l~~F~g~~dp~~G~d~g~~VR~~AkEl~~ll 128 (140)
T 1vdy_A 50 FSEFILKRLDNKSPIVKQKALRLIKYAVGKSGSEFRREMQRNSVAV-RNLFHYKGHPDPLKGDALNKAVRETAHETISAI 128 (140)
T ss_dssp HHHHHHHHHTSSSHHHHHHHHHHHHHHTTTSCHHHHHHHHHTTHHH-HTTTTCCCCCCTTTSSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCcceeehHHHHHHHHHHhCCHHHHHHHHHhHHHH-HHHHhcCCCCCcccccchhHHHHHHHHHHHHHH
Confidence 4567777888888888999999999999888765544333333222 1122 1 21 1256789999999999
Q ss_pred HhcCC
Q 044095 291 KEYGQ 295 (308)
Q Consensus 291 ~~~~e 295 (308)
.+..+
T Consensus 129 ~d~~~ 133 (140)
T 1vdy_A 129 FSEEN 133 (140)
T ss_dssp TCCSS
T ss_pred hCcCC
Confidence 87654
No 85
>3ebb_A Phospholipase A2-activating protein; armadillo repeat, structural genomics consortium, SGC, WD repeat, acetylation, ATP-binding; 1.90A {Homo sapiens}
Probab=57.57 E-value=1.2e+02 Score=27.96 Aligned_cols=112 Identities=9% Similarity=-0.040 Sum_probs=59.9
Q ss_pred chHHHHHHHhCCCCCCCCCcHH-HHHHHhcCCCCcHHHHHHhCcHHHHHH-H---Hhc-cChhHHHHHHHHHHHHhcChh
Q 044095 137 AALYLLERSLLPNPPSDQACQP-ELMRALCLAESNRRVAVEAGAVGAVIE-V---VAE-LDAAAGERALAALELMCTVAE 210 (308)
Q Consensus 137 ~AI~lLV~LL~~g~~~~k~~a~-a~l~aL~~~~~Nr~~iV~aGAVp~LVe-L---L~~-~s~~~~E~ALAiL~~La~~~e 210 (308)
..|..|.+++. =+.+...+. +++|-+..+++--....+...-..++. + +.+ ......=.++.+|.||-.+..
T Consensus 103 ~~l~~l~kil~--WP~~~~fPvLDLlRl~~l~p~~~~~~~~~~~~~~l~~~l~~~~~~~~~p~n~ml~lR~l~NlF~~~~ 180 (304)
T 3ebb_A 103 QQLQILWKAIN--CPEDIVFPALDILRLSIKHPSVNENFCNEKEGAQFSSHLINLLNPKGKPANQLLALRTFCNCFVGQA 180 (304)
T ss_dssp HHHHHHHHHHT--SCTTTCHHHHHHHHHHTTSHHHHHHHHSTTTHHHHHHHHHHTTCTTSCHHHHHHHHHHHHHGGGSHH
T ss_pred HHHHHHHHHHc--CCHHhHHHHHHHHHHHHcCccHHHHhhccccchHHHHHHHHhcCCCCChHHHHHHHHHHHHccCCch
Confidence 35677777762 222333333 777765554433333323222233332 2 221 223344568888899989999
Q ss_pred hHHHHHhcc-CcHHHHHHHhcCCCHHHHHHHHHHHHHHhcC
Q 044095 211 GAEETRAHA-LAVPVMVTMMGQMAGRGKEYAISVLAVIYGG 250 (308)
Q Consensus 211 Gr~aI~~~~-gaIp~LV~lLr~gS~~~KE~AVa~L~sLC~~ 250 (308)
||..|..+. ..+..++..+......-+--++.+++|++..
T Consensus 181 g~~~l~~~~~~il~~~~~~~~~~nknl~iA~ATl~~NlAv~ 221 (304)
T 3ebb_A 181 GQKLMMSQRESLMSHAIELKSGSNKNIHIALATLALNYSVC 221 (304)
T ss_dssp HHHHHHHTHHHHHHHHHGGGSSCCHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHH
Confidence 999887632 1233333333223445555666788888763
No 86
>2fv2_A RCD1 required for cell differentiation1 homolog; armadillo-repeat, transcription; 2.20A {Homo sapiens}
Probab=56.28 E-value=38 Score=31.30 Aligned_cols=93 Identities=12% Similarity=0.085 Sum_probs=71.0
Q ss_pred HHHHHhcCCCCcHHHHHHhCcHHHHHHHHhccC-----hhHHHHHHHHHHHHhcChhh--HHHHHhccCcHHHHHHHhcC
Q 044095 159 ELMRALCLAESNRRVAVEAGAVGAVIEVVAELD-----AAAGERALAALELMCTVAEG--AEETRAHALAVPVMVTMMGQ 231 (308)
Q Consensus 159 a~l~aL~~~~~Nr~~iV~aGAVp~LVeLL~~~s-----~~~~E~ALAiL~~La~~~eG--r~aI~~~~gaIp~LV~lLr~ 231 (308)
+++-.++.+++-|...+++...--|--+|...+ +.+.=.+|.|...|...+++ -.-+.. .+.||..+++|+.
T Consensus 78 aLlQcvAshpetr~~Fl~a~iplyLyPfL~t~sk~r~fE~LRLtsLGVIgaLvK~dd~eVi~fLL~-tEiiplCLrime~ 156 (268)
T 2fv2_A 78 ALLQCVASHPETRSAFLAAHIPLFLYPFLHTVSKTRPFEYLRLTSLGVIGALVKTDEQEVINFLLT-TEIIPLCLRIMES 156 (268)
T ss_dssp HHHHHHHHCTTTHHHHHHTTGGGGTHHHHHCCCCSHHHHHHHHHHHHHHHHHGGGCCHHHHHHHHH-TTHHHHHHHHHHH
T ss_pred HHHHHHHcCcchhhHHHHccchHHhhhhhccccCCCcchhhhhhHHHHHHHHhccCcHHHHHHHHh-hhHHHHHHHHHhh
Confidence 444567899999999999999999999987432 23334588888888876443 222224 4689999999999
Q ss_pred CCHHHHHHHHHHHHHHhcCCc
Q 044095 232 MAGRGKEYAISVLAVIYGGGD 252 (308)
Q Consensus 232 gS~~~KE~AVa~L~sLC~~~~ 252 (308)
||+-.|--|..||..|-.++.
T Consensus 157 GselSKtvAtfIlqKIL~dd~ 177 (268)
T 2fv2_A 157 GSELSKTVATFILQKILLDDT 177 (268)
T ss_dssp SCHHHHHHHHHHHHHHHHSHH
T ss_pred ccHHHHHHHHHHHHHHhccch
Confidence 999999999999998865543
No 87
>3ebb_A Phospholipase A2-activating protein; armadillo repeat, structural genomics consortium, SGC, WD repeat, acetylation, ATP-binding; 1.90A {Homo sapiens}
Probab=55.58 E-value=9.9 Score=35.31 Aligned_cols=123 Identities=7% Similarity=0.002 Sum_probs=65.7
Q ss_pred HhcCCCCcHHHHHHhCcHHHHHHHHh----ccChhHHHHHHHHHHHHhcCh---hhHHHHHhccCcHHHHHHHhcC-CCH
Q 044095 163 ALCLAESNRRVAVEAGAVGAVIEVVA----ELDAAAGERALAALELMCTVA---EGAEETRAHALAVPVMVTMMGQ-MAG 234 (308)
Q Consensus 163 aL~~~~~Nr~~iV~aGAVp~LVeLL~----~~s~~~~E~ALAiL~~La~~~---eGr~aI~~~~gaIp~LV~lLr~-gS~ 234 (308)
|+-.+...|..+.+. ...+++.+. +.+..+.-.+..++.|++... .+.+.. ...+..+..++++ .+.
T Consensus 174 NlF~~~~g~~~l~~~--~~~il~~~~~~~~~~nknl~iA~ATl~~NlAv~~~~~~~~~~~---~~ll~~l~~il~~~~d~ 248 (304)
T 3ebb_A 174 NCFVGQAGQKLMMSQ--RESLMSHAIELKSGSNKNIHIALATLALNYSVCFHKDHNIEGK---AQCLSLISTILEVVQDL 248 (304)
T ss_dssp HGGGSHHHHHHHHHT--HHHHHHHHHGGGSSCCHHHHHHHHHHHHHHHHHHHHSCCHHHH---HHHHHHHHHHHTTCCCH
T ss_pred HccCCchhHHHHHHH--HHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHhhcCCchHH---HHHHHHHHHHHhccCCH
Confidence 444555556655542 244444443 335667777778888888741 011111 1133444555554 366
Q ss_pred HHHHHHHHHHHHHhcCCcchhhccCCccHHHHHHHHHhCCCCHHHHHHHHHHHHHH
Q 044095 235 RGKEYAISVLAVIYGGGDQLVVAAPPEEVARAVELALQGNCTPRGRRKGTQLLKSL 290 (308)
Q Consensus 235 ~~KE~AVa~L~sLC~~~~~~v~~a~~~gv~~Ll~Lllqg~cS~raKrKA~~LLklL 290 (308)
+..-.++.+|.+|...+++....+..-++...+.-+..+....|.++-|+.||++|
T Consensus 249 EalyR~LvALGtL~~~~~~~~~lak~l~~~~~v~~~~~~~~~~kv~~~~~~~~~~l 304 (304)
T 3ebb_A 249 EATFRLLVALGTLISDDSNAVQLAKSLGVDSQIKKYSSVSEPAKVSECCRFILNLL 304 (304)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHGGGGGGCCSSHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHhCChhHHHHHHHcCHHHHHHHHHhCCCchhHHHHHHHHHHhC
Confidence 67777777777777665443322222233332222334433677778888887654
No 88
>2fv2_A RCD1 required for cell differentiation1 homolog; armadillo-repeat, transcription; 2.20A {Homo sapiens}
Probab=55.19 E-value=1e+02 Score=28.43 Aligned_cols=126 Identities=11% Similarity=0.037 Sum_probs=84.8
Q ss_pred HHHHhcCC--CCcHHHHHHhCcHHHHHHHHhccChhHHHHHHHHHHHHhcChhhHHHHHhccCcH-------HHHHHHh-
Q 044095 160 LMRALCLA--ESNRRVAVEAGAVGAVIEVVAELDAAAGERALAALELMCTVAEGAEETRAHALAV-------PVMVTMM- 229 (308)
Q Consensus 160 ~l~aL~~~--~~Nr~~iV~aGAVp~LVeLL~~~s~~~~E~ALAiL~~La~~~eGr~aI~~~~gaI-------p~LV~lL- 229 (308)
+..+|... .+-..-..+...||..+..+..|++--+--|..||..+-.+++|..-|.....=+ ..+|.-|
T Consensus 125 VIgaLvK~dd~eVi~fLL~tEiiplCLrime~GselSKtvAtfIlqKIL~dd~GL~YiC~t~eRF~av~~vL~~mV~~l~ 204 (268)
T 2fv2_A 125 VIGALVKTDEQEVINFLLTTEIIPLCLRIMESGSELSKTVATFILQKILLDDTGLAYICQTYERFSHVAMILGKMVLQLS 204 (268)
T ss_dssp HHHHHGGGCCHHHHHHHHHTTHHHHHHHHHHHSCHHHHHHHHHHHHHHHHSHHHHHHHTSSHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHhccCcHHHHHHHHhhhHHHHHHHHHhhccHHHHHHHHHHHHHHhccchhHHHHHccHHHHHHHHHHHHHHHHHHh
Confidence 33456643 3345566788999999999988888888889999999999999988877544322 2233333
Q ss_pred cCCCHHHHHHHHHHHHHHhcCCcch--hh----ccCCccHHHHHHHHHhCCCCHHHHHHHHHHHHHH
Q 044095 230 GQMAGRGKEYAISVLAVIYGGGDQL--VV----AAPPEEVARAVELALQGNCTPRGRRKGTQLLKSL 290 (308)
Q Consensus 230 r~gS~~~KE~AVa~L~sLC~~~~~~--v~----~a~~~gv~~Ll~Lllqg~cS~raKrKA~~LLklL 290 (308)
+..|.|=-+|-+.+-..||.+.+.+ .+ +.++.|.+. -.+.+ ...+|+-=.+||..+
T Consensus 205 ~~ps~RLLKhiircYlRLsdn~rar~aL~~~LP~~Lrd~tf~---~~l~~--D~~~k~~l~qLl~n~ 266 (268)
T 2fv2_A 205 KEPSARLLKHVVRCYLRLSDNPRAREALRQCLPDQLKDTTFA---QVLKD--DTTTKRWLAQLVKNL 266 (268)
T ss_dssp TSCCHHHHHHHHHHHHHHTTSHHHHHHHHHHSCGGGTSSTTH---HHHTS--CHHHHHHHHHHHHHS
T ss_pred cCCChHHHHHHHHHHHHHhcCHHHHHHHHHhCcHHhhChHHH---HHHhc--CHHHHHHHHHHHHhc
Confidence 3468899999999999998876432 11 223333322 22345 677777777776554
No 89
>4ady_A RPN2, 26S proteasome regulatory subunit RPN2; protein binding, PC repeat; 2.70A {Saccharomyces cerevisiae} PDB: 4b4t_N
Probab=52.61 E-value=1e+02 Score=33.24 Aligned_cols=63 Identities=16% Similarity=0.212 Sum_probs=35.8
Q ss_pred HHHHHHHHh-ccChhHHHHHHHHHHHHhcChhhHHHHHhccCcHHHHHHHhcC-CCHHHHHHHHHHHHHHhcCC
Q 044095 180 VGAVIEVVA-ELDAAAGERALAALELMCTVAEGAEETRAHALAVPVMVTMMGQ-MAGRGKEYAISVLAVIYGGG 251 (308)
Q Consensus 180 Vp~LVeLL~-~~s~~~~E~ALAiL~~La~~~eGr~aI~~~~gaIp~LV~lLr~-gS~~~KE~AVa~L~sLC~~~ 251 (308)
|..|+..+. +.++++...|+..|+.++..+ ...++.++++|.+ +....|-.|+-+|-.+|-+.
T Consensus 579 Iq~LL~~~~~d~~d~VRraAViaLGlI~~g~---------~e~v~rlv~~L~~~~d~~VR~gAalALGli~aGn 643 (963)
T 4ady_A 579 VKRLLHVAVSDSNDDVRRAAVIALGFVLLRD---------YTTVPRIVQLLSKSHNAHVRCGTAFALGIACAGK 643 (963)
T ss_dssp HHHHHHHHHHCSCHHHHHHHHHHHHHHTSSS---------CSSHHHHTTTGGGCSCHHHHHHHHHHHHHHTSSS
T ss_pred HHHHHHHhccCCcHHHHHHHHHHHHhhccCC---------HHHHHHHHHHHHhcCCHHHHHHHHHHHHHhccCC
Confidence 444555543 344555555666666554422 2356667765543 56666766777777776544
No 90
>3u0r_A Apoptosis inhibitor 5; heat repeat, armadillo repeat, lysine acetylation; 2.50A {Homo sapiens} PDB: 3v6a_A
Probab=48.82 E-value=96 Score=31.10 Aligned_cols=93 Identities=15% Similarity=0.201 Sum_probs=49.9
Q ss_pred cHHHHHHHHhccChhHHHHHHHHHHHHhcChhhHHHHHhccCcHHHHHHHhcCCCHHHHHHHHHHHHHHhcCCcchhhcc
Q 044095 179 AVGAVIEVVAELDAAAGERALAALELMCTVAEGAEETRAHALAVPVMVTMMGQMAGRGKEYAISVLAVIYGGGDQLVVAA 258 (308)
Q Consensus 179 AVp~LVeLL~~~s~~~~E~ALAiL~~La~~~eGr~aI~~~~gaIp~LV~lLr~gS~~~KE~AVa~L~sLC~~~~~~v~~a 258 (308)
||..+++|..|.+....-.|+.-|-.+|.. +.... .+-.|+++|........+..=..|..|-+.+...+
T Consensus 66 Ai~a~lDLcEDed~~IR~qaik~Lp~~ck~-~~i~k------iaDvL~QlLqtdd~~E~~~V~~sL~sllk~Dpk~t--- 135 (507)
T 3u0r_A 66 AINAQLDLCEDEDVSIRRQAIKELPQFATG-ENLPR------VADILTQLLQTDDSAEFNLVNNALLSIFKMDAKGT--- 135 (507)
T ss_dssp HHHHHHHHHTCSSHHHHHHHHHHGGGGCCT-TCHHH------HHHHHHHHTTCCCHHHHHHHHHHHHHHHHHCHHHH---
T ss_pred HHHHHHHHHhcccHHHHHHHHHhhHHHhhh-hhhhh------HHHHHHHHHhccchHHHHHHHHHHHHHHhcChHHH---
Confidence 345566666555555555566666666654 33222 23456777775554444444466666655442211
Q ss_pred CCccHHHHHHHHHhCCCCHHHHHHHHHHH
Q 044095 259 PPEEVARAVELALQGNCTPRGRRKGTQLL 287 (308)
Q Consensus 259 ~~~gv~~Ll~Lllqg~cS~raKrKA~~LL 287 (308)
...+...+.+| .+..|+|+-..|
T Consensus 136 ----l~~lf~~i~~~--~e~~Rer~lkFi 158 (507)
T 3u0r_A 136 ----LGGLFSQILQG--EDIVRERAIKFL 158 (507)
T ss_dssp ----HHHHHHHHHHS--CHHHHHHHHHHH
T ss_pred ----HHHHHHHHccc--chHHHHHHHHHH
Confidence 12344455566 677777765544
No 91
>2iw3_A Elongation factor 3A; acetylation, ATP-binding, protein biosynthesis, nucleotide-binding, phosphorylation, RNA- binding, rRNA-binding; HET: ADP; 2.4A {Saccharomyces cerevisiae} PDB: 2iwh_A* 2ix3_A 2ix8_A
Probab=48.52 E-value=1.8e+02 Score=31.33 Aligned_cols=130 Identities=9% Similarity=0.025 Sum_probs=80.2
Q ss_pred HHHHhcCCCCc--HHHHHHhCcHHHHHHHHhccChhHHHHHHHHHHHHhcC--hhhHHHHHhccCcHHHHHHHhcCC-CH
Q 044095 160 LMRALCLAESN--RRVAVEAGAVGAVIEVVAELDAAAGERALAALELMCTV--AEGAEETRAHALAVPVMVTMMGQM-AG 234 (308)
Q Consensus 160 ~l~aL~~~~~N--r~~iV~aGAVp~LVeLL~~~s~~~~E~ALAiL~~La~~--~eGr~aI~~~~gaIp~LV~lLr~g-S~ 234 (308)
++.+||..... .....=.+.++.+++.+.|....+++.|-+++..|... +++. ...+|.|++.|... -=
T Consensus 75 ~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~dk~~~v~~aa~~~~~~~~~~~~~~a~------~~~~~~~~~~~~~~~kw 148 (986)
T 2iw3_A 75 AVAHIANQSNLSPSVEPYIVQLVPAICTNAGNKDKEIQSVASETLISIVNAVNPVAI------KALLPHLTNAIVETNKW 148 (986)
T ss_dssp HHHHHTCTTTCCTTTHHHHHTTHHHHHHHTTCSSHHHHHHHHHHHHHHHHHSCGGGH------HHHHHHHHHHHHHCCCH
T ss_pred HHHHHHHhcCCCCCcccchHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHhCCHHHH------HHHHHHHHHHhccccch
Confidence 34467743221 22223336788888888887777777777666666652 3332 12578899988765 46
Q ss_pred HHHHHHHHHHHHHhcCCcchhhccCCccHHHHHHHHHhCCCCHHHHHHHHHHHHHHHhcCCCC
Q 044095 235 RGKEYAISVLAVIYGGGDQLVVAAPPEEVARAVELALQGNCTPRGRRKGTQLLKSLKEYGQPD 297 (308)
Q Consensus 235 ~~KE~AVa~L~sLC~~~~~~v~~a~~~gv~~Ll~Lllqg~cS~raKrKA~~LLklL~~~~e~~ 297 (308)
+.|.-|+.+|-.|.....+.+...+.+-|+.+- -.+.. --+..|+.|..-|..++.+-.|.
T Consensus 149 ~~k~~~l~~~~~~~~~~~~~~~~~~~~~~p~~~-~~~~d-~k~~v~~~~~~~~~~~~~~~~n~ 209 (986)
T 2iw3_A 149 QEKIAILAAFSAMVDAAKDQVALRMPELIPVLS-ETMWD-TKKEVKAAATAAMTKATETVDNK 209 (986)
T ss_dssp HHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHH-HHTTC-SSHHHHHHHHHHHHHHGGGCCCT
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHhccchhcchH-hhccc-CcHHHHHHHHHHHHHHHhcCCCc
Confidence 899999999999986544333223333344443 33322 24677788888888888765553
No 92
>2iw3_A Elongation factor 3A; acetylation, ATP-binding, protein biosynthesis, nucleotide-binding, phosphorylation, RNA- binding, rRNA-binding; HET: ADP; 2.4A {Saccharomyces cerevisiae} PDB: 2iwh_A* 2ix3_A 2ix8_A
Probab=47.51 E-value=44 Score=36.06 Aligned_cols=129 Identities=14% Similarity=0.143 Sum_probs=78.2
Q ss_pred HHHHHhcCCCCcHHHHHHhCcHHHHHHHHhccChhHHHHHHHHHHHHhcChhh-HHHHHhccCcHHHHHHHhcCCCHHHH
Q 044095 159 ELMRALCLAESNRRVAVEAGAVGAVIEVVAELDAAAGERALAALELMCTVAEG-AEETRAHALAVPVMVTMMGQMAGRGK 237 (308)
Q Consensus 159 a~l~aL~~~~~Nr~~iV~aGAVp~LVeLL~~~s~~~~E~ALAiL~~La~~~eG-r~aI~~~~gaIp~LV~lLr~gS~~~K 237 (308)
.+|..+|..-+|+.- +.-||.||+-+.+. +.+.+++..|..---..+= ..++ +-.+|.|.+-|++.+...|
T Consensus 197 ~~~~~~~~~~~n~d~---~~~~~~~~~~~~~p--~~~~~~~~~l~~~tfv~~v~~~~l---~~~~p~l~r~l~~~~~~~~ 268 (986)
T 2iw3_A 197 AAMTKATETVDNKDI---ERFIPSLIQCIADP--TEVPETVHLLGATTFVAEVTPATL---SIMVPLLSRGLNERETGIK 268 (986)
T ss_dssp HHHHHHGGGCCCTTT---GGGHHHHHHHHHCT--THHHHHHHHHTTCCCCSCCCHHHH---HHHHHHHHHHHTSSSHHHH
T ss_pred HHHHHHHhcCCCcch---hhhHHHHHHHhcCh--hhhHHHHHHhhcCeeEeeecchhH---HHHHHHHHhhhccCcchhh
Confidence 556678866667643 35678888888764 3355555544332212221 1111 1246777788877788888
Q ss_pred HHHHHHHHHHhcCCcchhh--ccCCccHHHHHHHHHhCCCCHHHHHHHHHHHHHHHhcCCC
Q 044095 238 EYAISVLAVIYGGGDQLVV--AAPPEEVARAVELALQGNCTPRGRRKGTQLLKSLKEYGQP 296 (308)
Q Consensus 238 E~AVa~L~sLC~~~~~~v~--~a~~~gv~~Ll~Lllqg~cS~raKrKA~~LLklL~~~~e~ 296 (308)
..++.|.=|||+.-++-.. .-+..=.+. +.-..++=..+.+|+.|..-++.|.+....
T Consensus 269 r~~~~~~~n~~~lv~~~~~~~~f~~~l~p~-~~~~~~~~~~pe~r~~~~~a~~~l~~~~~~ 328 (986)
T 2iw3_A 269 RKSAVIIDNMCKLVEDPQVIAPFLGKLLPG-LKSNFATIADPEAREVTLRALKTLRRVGNV 328 (986)
T ss_dssp HHHHHHHHHHHTTCCCHHHHHHHHTTTHHH-HHHHTTTCCSHHHHHHHHHHHHHHHHHHTC
T ss_pred eeeEEEEcchhhhcCCHHHHhhhhhhhhhH-HHHHhhccCCHHHHHHHHHHHHHHHHhhcc
Confidence 9999999999996554321 111111222 233344434799999999999988876443
No 93
>1juq_A ADP-ribosylation factor binding protein GGA3; protein-peptide compelx, VHS domain, DXXLL sorting signal, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.9.2 PDB: 1jpl_A 1lf8_A*
Probab=45.95 E-value=45 Score=28.24 Aligned_cols=70 Identities=14% Similarity=0.053 Sum_probs=51.5
Q ss_pred cHHHHHHHHhccChhHHHHHHHHHHHHhcC--hhhHHHHHhccCcHHHHHHHhcC------CCHHHHHHHHHHHHHHhc
Q 044095 179 AVGAVIEVVAELDAAAGERALAALELMCTV--AEGAEETRAHALAVPVMVTMMGQ------MAGRGKEYAISVLAVIYG 249 (308)
Q Consensus 179 AVp~LVeLL~~~s~~~~E~ALAiL~~La~~--~eGr~aI~~~~gaIp~LV~lLr~------gS~~~KE~AVa~L~sLC~ 249 (308)
|+..|..-|...+...+-.||.+|+.+..+ ..=..+|+. ...+..|++++.. ...+-|+.++.++..-..
T Consensus 51 A~ral~krl~~~n~~vql~AL~LLd~~vkNCG~~Fh~evas-~~Fl~eL~kl~~~k~~~~~~~~~Vk~kil~li~~W~~ 128 (171)
T 1juq_A 51 AVRLLAHKIQSPQEWEALQALTVLEACMKNCGRRFHNEVGK-FRFLNELIKVVSPKYLGDRVSEKVKTKVIELLYSWTM 128 (171)
T ss_dssp HHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSHHHHHHHHTS-HHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHHHcCHHHHHHHhh-HHHHHHHHHHhccccCCCCCCHHHHHHHHHHHHHHHH
Confidence 455677777777788888899999999884 234556765 5578889999863 357888888888866653
No 94
>3ldz_A STAM-1, signal transducing adapter molecule 1; ubiquitin-binding, cytoplasm, UBL conjugation, endosome, membrane, protein transport, SH3 domain; 2.60A {Homo sapiens} SCOP: a.118.9.0
Probab=45.30 E-value=51 Score=26.83 Aligned_cols=68 Identities=10% Similarity=-0.010 Sum_probs=45.7
Q ss_pred HHHHHHHHhccChhHHHHHHHHHHHHhcCh--hhHHHHHhccCcHHHHHHHhcCCCHHHHHHHHHHHHHHh
Q 044095 180 VGAVIEVVAELDAAAGERALAALELMCTVA--EGAEETRAHALAVPVMVTMMGQMAGRGKEYAISVLAVIY 248 (308)
Q Consensus 180 Vp~LVeLL~~~s~~~~E~ALAiL~~La~~~--eGr~aI~~~~gaIp~LV~lLr~gS~~~KE~AVa~L~sLC 248 (308)
+..|..-|...+...+-.||.+|+.+..+- .=..+|+. ...+..|++++.+....-|+..+.++....
T Consensus 44 ~rai~Krl~~~n~~~ql~AL~LLe~~vkNcG~~f~~evas-~~Fl~el~~l~~~~~~~Vk~kil~li~~W~ 113 (140)
T 3ldz_A 44 LRSIMRRVNHKDPHVAMQALTLLGACVSNCGKIFHLEVCS-RDFASEVSNVLNKGHPKVCEKLKALMVEWT 113 (140)
T ss_dssp HHHHHHHHTCSSHHHHHHHHHHHHHHHHHSCHHHHHHHSS-HHHHHHHHHHHHHSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCChHHHHHHHHHHHHHHHhcCHHHHHHHhh-HHHHHHHHHHhccCCHHHHHHHHHHHHHHH
Confidence 344455555555566667888888887732 22445654 347778888887777888888888887664
No 95
>1x5b_A Signal transducing adaptor molecule 2; VHS domain, ubiquitin binding, STAM2, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2l0t_B
Probab=44.49 E-value=93 Score=26.01 Aligned_cols=75 Identities=9% Similarity=0.074 Sum_probs=51.2
Q ss_pred cHHHHHHHhcCCCHHHHHHHHHHHHHHhcCCcchhh-ccCCccH-HHHHHHHHhCCCCHHHHHHHHHHHHHHHhcCCC
Q 044095 221 AVPVMVTMMGQMAGRGKEYAISVLAVIYGGGDQLVV-AAPPEEV-ARAVELALQGNCTPRGRRKGTQLLKSLKEYGQP 296 (308)
Q Consensus 221 aIp~LV~lLr~gS~~~KE~AVa~L~sLC~~~~~~v~-~a~~~gv-~~Ll~Lllqg~cS~raKrKA~~LLklL~~~~e~ 296 (308)
++..|.+.|..+.....-+|+.+|=.+-.+++.... ++..... -.++.++. .....+.|+|+.+|++.....-++
T Consensus 53 A~ral~krl~~~n~~vql~AL~LLd~~vkNcG~~Fh~evas~~Fl~el~~l~~-~~~~~~Vk~kil~li~~W~~~f~~ 129 (163)
T 1x5b_A 53 CLKAIMKRVNHKVPHVALQALTLLGACVANCGKIFHLEVCSRDFATEVRAVIK-NKAHPKVCEKLKSLMVEWSEEFQK 129 (163)
T ss_dssp HHHHHHHHHTCSSHHHHHHHHHHHHHHHHHTCHHHHHHHTSHHHHHHHHHHHH-TTCCHHHHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhHHHHHHHhhHHHHHHHHHHHc-cCCCHHHHHHHHHHHHHHHHHhcC
Confidence 566788888888888888888888777777765443 4444443 34444443 323689999999998877765443
No 96
>2of3_A ZYG-9; multifunctional macromolecule, kinetochore, microtubule, XMAP215, STU2, DIS1, microtubule associated protein, structural protein; 1.90A {Caenorhabditis elegans}
Probab=44.25 E-value=75 Score=28.91 Aligned_cols=64 Identities=9% Similarity=0.110 Sum_probs=44.5
Q ss_pred cHHHHHHHHhccChhHHHHHHHHHHHHhcChhhHHHHHhccCcHHHHHHHhcCCCHHHHHHHHHHHHHHhc
Q 044095 179 AVGAVIEVVAELDAAAGERALAALELMCTVAEGAEETRAHALAVPVMVTMMGQMAGRGKEYAISVLAVIYG 249 (308)
Q Consensus 179 AVp~LVeLL~~~s~~~~E~ALAiL~~La~~~eGr~aI~~~~gaIp~LV~lLr~gS~~~KE~AVa~L~sLC~ 249 (308)
.+|.||+-+.|..+...+.+-.+|..|+.. ......++.+++-++.-+.|.|+-++..|..+-.
T Consensus 133 ~lP~LveKlGd~k~~vR~~~r~il~~l~~v-------~~~~~v~~~l~~g~ksKN~R~R~e~l~~l~~li~ 196 (266)
T 2of3_A 133 FVPYLLLKTGEAKDNMRTSVRDIVNVLSDV-------VGPLKMTPMLLDALKSKNARQRSECLLVIEYYIT 196 (266)
T ss_dssp HHHHHHHGGGCSSHHHHHHHHHHHHHHHHH-------HCHHHHHHHHHHGGGCSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCChHHHHHHHHHHHHHHHHH-------CCHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHH
Confidence 567777777777777777777777776531 2212245566676777789999999988888743
No 97
>1x5b_A Signal transducing adaptor molecule 2; VHS domain, ubiquitin binding, STAM2, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2l0t_B
Probab=40.96 E-value=56 Score=27.38 Aligned_cols=69 Identities=12% Similarity=-0.046 Sum_probs=46.9
Q ss_pred cHHHHHHHHhccChhHHHHHHHHHHHHhcC--hhhHHHHHhccCcHHHHHHHhcC-CCHHHHHHHHHHHHHHh
Q 044095 179 AVGAVIEVVAELDAAAGERALAALELMCTV--AEGAEETRAHALAVPVMVTMMGQ-MAGRGKEYAISVLAVIY 248 (308)
Q Consensus 179 AVp~LVeLL~~~s~~~~E~ALAiL~~La~~--~eGr~aI~~~~gaIp~LV~lLr~-gS~~~KE~AVa~L~sLC 248 (308)
||..|..-|...+...+-.||.+|+.+..+ ..=..+|+. ...+..|++++.. ....-|+.++.++..-.
T Consensus 53 A~ral~krl~~~n~~vql~AL~LLd~~vkNcG~~Fh~evas-~~Fl~el~~l~~~~~~~~Vk~kil~li~~W~ 124 (163)
T 1x5b_A 53 CLKAIMKRVNHKVPHVALQALTLLGACVANCGKIFHLEVCS-RDFATEVRAVIKNKAHPKVCEKLKSLMVEWS 124 (163)
T ss_dssp HHHHHHHHHTCSSHHHHHHHHHHHHHHHHHTCHHHHHHHTS-HHHHHHHHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhHHHHHHHhh-HHHHHHHHHHHccCCCHHHHHHHHHHHHHHH
Confidence 344556666666667777799999998874 233556654 4577888888875 46678888877765554
No 98
>3zyq_A Hepatocyte growth factor-regulated tyrosine kinas substrate; signaling; 1.48A {Homo sapiens} PDB: 4avx_A*
Probab=39.43 E-value=67 Score=28.20 Aligned_cols=95 Identities=16% Similarity=0.114 Sum_probs=60.3
Q ss_pred HHHHHHHHHHhcChhhHHHHHhccCcHHHHHHHhcCCCHHHHHHHHHHHHHHhcCCcchh-hccCCcc-HHHHHHHHHhC
Q 044095 196 ERALAALELMCTVAEGAEETRAHALAVPVMVTMMGQMAGRGKEYAISVLAVIYGGGDQLV-VAAPPEE-VARAVELALQG 273 (308)
Q Consensus 196 E~ALAiL~~La~~~eGr~aI~~~~gaIp~LV~lLr~gS~~~KE~AVa~L~sLC~~~~~~v-~~a~~~g-v~~Ll~Lllqg 273 (308)
+..+.|-+.+-..++|-. .+|..|.+.|...+....-+|+.+|=.+-.+.+... .++.... +-.|+.++- .
T Consensus 27 ~~ileicD~I~~~~~~~k------~a~ral~krl~~~n~~v~l~aL~LLe~~vkNcG~~f~~eias~~fl~~l~~l~~-~ 99 (226)
T 3zyq_A 27 ESILQICDLIRQGDTQAK------YAVNSIKKKVNDKNPHVALYALEVMESVVKNCGQTVHDEVANKQTMEELKDLLK-R 99 (226)
T ss_dssp HHHHHHHHHHHTTSSCHH------HHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHCHHHHHHHSSHHHHHHHHHHHH-H
T ss_pred HHHHHHHHHHhCCCccHH------HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHhcchHHHHhhccHHHHHHHHHHhc-c
Confidence 344555555554444321 256778888888899999999998888877776543 3344444 334444442 2
Q ss_pred CCCHHHHHHHHHHHHHHHhcCCCC
Q 044095 274 NCTPRGRRKGTQLLKSLKEYGQPD 297 (308)
Q Consensus 274 ~cS~raKrKA~~LLklL~~~~e~~ 297 (308)
.-....|+|+.+|++.....-+++
T Consensus 100 ~~~~~Vk~kil~li~~W~~~f~~~ 123 (226)
T 3zyq_A 100 QVEVNVRNKILYLIQAWAHAFRNE 123 (226)
T ss_dssp CCCHHHHHHHHHHHHHHHHHTTTC
T ss_pred CCCHHHHHHHHHHHHHHHHHhCCC
Confidence 236789999999998877654443
No 99
>3zyq_A Hepatocyte growth factor-regulated tyrosine kinas substrate; signaling; 1.48A {Homo sapiens} PDB: 4avx_A*
Probab=39.02 E-value=49 Score=29.10 Aligned_cols=70 Identities=10% Similarity=0.104 Sum_probs=49.8
Q ss_pred cHHHHHHHHhccChhHHHHHHHHHHHHhcChh--hHHHHHhccCcHHHHHHHhcC-CCHHHHHHHHHHHHHHhc
Q 044095 179 AVGAVIEVVAELDAAAGERALAALELMCTVAE--GAEETRAHALAVPVMVTMMGQ-MAGRGKEYAISVLAVIYG 249 (308)
Q Consensus 179 AVp~LVeLL~~~s~~~~E~ALAiL~~La~~~e--Gr~aI~~~~gaIp~LV~lLr~-gS~~~KE~AVa~L~sLC~ 249 (308)
||.+|..-|...+...+-.||.+|+.+..+-+ -..+|+. ...+..|++++.. ....-|+..+.+|.....
T Consensus 46 a~ral~krl~~~n~~v~l~aL~LLe~~vkNcG~~f~~eias-~~fl~~l~~l~~~~~~~~Vk~kil~li~~W~~ 118 (226)
T 3zyq_A 46 AVNSIKKKVNDKNPHVALYALEVMESVVKNCGQTVHDEVAN-KQTMEELKDLLKRQVEVNVRNKILYLIQAWAH 118 (226)
T ss_dssp HHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHCHHHHHHHSS-HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHhcchHHHHhhcc-HHHHHHHHHHhccCCCHHHHHHHHHHHHHHHH
Confidence 34556666777777788889999999987422 2556655 4577788888865 467888888888776653
No 100
>1juq_A ADP-ribosylation factor binding protein GGA3; protein-peptide compelx, VHS domain, DXXLL sorting signal, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.9.2 PDB: 1jpl_A 1lf8_A*
Probab=37.38 E-value=52 Score=27.85 Aligned_cols=75 Identities=13% Similarity=0.062 Sum_probs=51.9
Q ss_pred cHHHHHHHhcCCCHHHHHHHHHHHHHHhcCCcchhh-ccCCccH-HHHHHHHHh---C-CCCHHHHHHHHHHHHHHHhcC
Q 044095 221 AVPVMVTMMGQMAGRGKEYAISVLAVIYGGGDQLVV-AAPPEEV-ARAVELALQ---G-NCTPRGRRKGTQLLKSLKEYG 294 (308)
Q Consensus 221 aIp~LV~lLr~gS~~~KE~AVa~L~sLC~~~~~~v~-~a~~~gv-~~Ll~Lllq---g-~cS~raKrKA~~LLklL~~~~ 294 (308)
++..|.+.|..+.....-+|+.+|=.+-.+++.... ++..... -.|+.++.. | .-..+.|+|+.+|++.....-
T Consensus 51 A~ral~krl~~~n~~vql~AL~LLd~~vkNCG~~Fh~evas~~Fl~eL~kl~~~k~~~~~~~~~Vk~kil~li~~W~~~f 130 (171)
T 1juq_A 51 AVRLLAHKIQSPQEWEALQALTVLEACMKNCGRRFHNEVGKFRFLNELIKVVSPKYLGDRVSEKVKTKVIELLYSWTMAL 130 (171)
T ss_dssp HHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSHHHHHHHHTSHHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHHHcCHHHHHHHhhHHHHHHHHHHhccccCCCCCCHHHHHHHHHHHHHHHHHc
Confidence 467788888888898889999988888888775543 4444443 355544431 1 125788999999988776554
Q ss_pred C
Q 044095 295 Q 295 (308)
Q Consensus 295 e 295 (308)
.
T Consensus 131 ~ 131 (171)
T 1juq_A 131 P 131 (171)
T ss_dssp T
T ss_pred C
Confidence 3
No 101
>3g2s_A C-terminal fragment of sortilin-related receptor; ADP-ribosylation factor binding protein GGA1, VHS, acidic- cluster dileucine signal, sorla; 1.70A {Homo sapiens} SCOP: a.118.9.2 PDB: 3g2t_A* 3g2u_A 3g2v_A* 3g2w_A 1ujk_A* 1jwf_A 1ujj_A 1jwg_A* 1py1_A*
Probab=37.01 E-value=74 Score=26.38 Aligned_cols=70 Identities=11% Similarity=0.038 Sum_probs=49.4
Q ss_pred cHHHHHHHHhccChhHHHHHHHHHHHHhcC--hhhHHHHHhccCcHHHHHHHhcC------CCHHHHHHHHHHHHHHhc
Q 044095 179 AVGAVIEVVAELDAAAGERALAALELMCTV--AEGAEETRAHALAVPVMVTMMGQ------MAGRGKEYAISVLAVIYG 249 (308)
Q Consensus 179 AVp~LVeLL~~~s~~~~E~ALAiL~~La~~--~eGr~aI~~~~gaIp~LV~lLr~------gS~~~KE~AVa~L~sLC~ 249 (308)
|+..|..-|...+...+-.||.+|+.+..+ ..-..+|+. ...+..|++++.. ....-|+..+.++..-..
T Consensus 49 a~ral~krl~~~n~~v~l~AL~LLe~cvkNCG~~fh~eias-~~Fl~eL~kl~~~k~~~~~~~~~Vk~kil~li~~W~~ 126 (149)
T 3g2s_A 49 ATRLLAHKIQSPQEWEAIQALTVLETCMKSCGKRFHDEVGK-FRFLNELIKVVSPKYLGSRTSEKVKNKILELLYSWTV 126 (149)
T ss_dssp HHHHHHHHHTCSSHHHHHHHHHHHHHHHHHCCHHHHHHHTS-HHHHHHHHHHHCTTTTGGGSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHhcCHHHHHHHhh-HHHHHHHHHHHcccccCCCCCHHHHHHHHHHHHHHHH
Confidence 345566666666677777899999998873 222566665 4578889999963 467888888888876653
No 102
>1mhq_A ADP-ribosylation factor binding protein GGA2; super helix, protein transport; 2.20A {Homo sapiens} SCOP: a.118.9.2
Probab=36.72 E-value=63 Score=26.65 Aligned_cols=71 Identities=14% Similarity=0.066 Sum_probs=50.9
Q ss_pred CcHHHHHHHHhccChhHHHHHHHHHHHHhcC--hhhHHHHHhccCcHHHHHHHhcC------CCHHHHHHHHHHHHHHhc
Q 044095 178 GAVGAVIEVVAELDAAAGERALAALELMCTV--AEGAEETRAHALAVPVMVTMMGQ------MAGRGKEYAISVLAVIYG 249 (308)
Q Consensus 178 GAVp~LVeLL~~~s~~~~E~ALAiL~~La~~--~eGr~aI~~~~gaIp~LV~lLr~------gS~~~KE~AVa~L~sLC~ 249 (308)
.|+..|..-|...+...+-.||.+|+.+..+ ..=..+|+. ...+..|++++.. ....-|+.++.++..-..
T Consensus 38 ~a~rai~krl~~~n~~vql~AL~LLe~~vkNCG~~fh~evas-~~Fl~eL~kl~~~k~~~~~~~~~Vk~kil~li~~W~~ 116 (148)
T 1mhq_A 38 HAPWLLAHKIQSPQEKEALYALTVLEMCMNHCGEKFHSEVAK-FRFLNELIKVLSPKYLGSWATGKVKGRVIEILFSWTV 116 (148)
T ss_dssp HHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSCHHHHHHHTS-HHHHHHHHHTTCCSTTSCCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHcCHHHHHHHhh-HHHHHHHHHHHccccCCCCCCHHHHHHHHHHHHHHHH
Confidence 3456666677777788888899999999874 234566765 4578888988863 356788888877766543
No 103
>1dvp_A HRS, hepatocyte growth factor-regulated tyrosine kinase substrate; VHS, FYVE, zinc finger, superhelix, transferase; HET: CIT; 2.00A {Drosophila melanogaster} SCOP: a.118.9.2 g.50.1.1
Probab=36.49 E-value=1e+02 Score=26.61 Aligned_cols=74 Identities=15% Similarity=0.038 Sum_probs=51.6
Q ss_pred cHHHHHHHhcCCCHHHHHHHHHHHHHHhcCCcchh-hccCCccH-HHHHHHHHhCCCCHHHHHHHHHHHHHHHhcCC
Q 044095 221 AVPVMVTMMGQMAGRGKEYAISVLAVIYGGGDQLV-VAAPPEEV-ARAVELALQGNCTPRGRRKGTQLLKSLKEYGQ 295 (308)
Q Consensus 221 aIp~LV~lLr~gS~~~KE~AVa~L~sLC~~~~~~v-~~a~~~gv-~~Ll~Lllqg~cS~raKrKA~~LLklL~~~~e 295 (308)
++..|.+.|........-+|+.+|=.+-.+.+... .++..... -.++.++.. .-....|+|+.+|++.....-+
T Consensus 43 a~r~l~krl~~~n~~~~l~aL~Lle~~vkNcG~~f~~eva~~~fl~~l~~l~~~-~~~~~Vk~kil~li~~W~~~f~ 118 (220)
T 1dvp_A 43 AFAAIKKKMNSPNPHSSCYSLLVLESIVKNCGAPVHEEVFTKENCEMFSSFLES-TPHENVRQKMLELVQTWAYAFR 118 (220)
T ss_dssp HHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSHHHHHHHHSSHHHHHHHHHHHHH-CSCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHhccCHHHHHHHHhHHHHHHHHHHhcC-CCcHHHHHHHHHHHHHHHHHhc
Confidence 56677888888889999999999988888877654 34444443 344444432 3368889999988887765433
No 104
>3ldz_A STAM-1, signal transducing adapter molecule 1; ubiquitin-binding, cytoplasm, UBL conjugation, endosome, membrane, protein transport, SH3 domain; 2.60A {Homo sapiens} SCOP: a.118.9.0
Probab=35.99 E-value=1e+02 Score=25.04 Aligned_cols=92 Identities=9% Similarity=0.076 Sum_probs=58.2
Q ss_pred HHHHHHHHHhcChhhHHHHHhccCcHHHHHHHhcCCCHHHHHHHHHHHHHHhcCCcchhh-ccCCcc-HHHHHHHHHhCC
Q 044095 197 RALAALELMCTVAEGAEETRAHALAVPVMVTMMGQMAGRGKEYAISVLAVIYGGGDQLVV-AAPPEE-VARAVELALQGN 274 (308)
Q Consensus 197 ~ALAiL~~La~~~eGr~aI~~~~gaIp~LV~lLr~gS~~~KE~AVa~L~sLC~~~~~~v~-~a~~~g-v~~Ll~Lllqg~ 274 (308)
..+.+-+.+-..++|-. .++..|.+.|..+.....-+|+.+|=.+..+++.... ++.... +-.++.++-..
T Consensus 25 ~ileicD~I~~~~~~~k------~a~rai~Krl~~~n~~~ql~AL~LLe~~vkNcG~~f~~evas~~Fl~el~~l~~~~- 97 (140)
T 3ldz_A 25 LILDICDKVGQSRTGPK------DCLRSIMRRVNHKDPHVAMQALTLLGACVSNCGKIFHLEVCSRDFASEVSNVLNKG- 97 (140)
T ss_dssp HHHHHHHHHTTSTTHHH------HHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSCHHHHHHHSSHHHHHHHHHHHHHS-
T ss_pred HHHHHHHHHHCCCcCHH------HHHHHHHHHHcCCChHHHHHHHHHHHHHHHhcCHHHHHHHhhHHHHHHHHHHhccC-
Confidence 34444444444444321 2567788888888888888898877777677765432 343444 33454444444
Q ss_pred CCHHHHHHHHHHHHHHHhcCCC
Q 044095 275 CTPRGRRKGTQLLKSLKEYGQP 296 (308)
Q Consensus 275 cS~raKrKA~~LLklL~~~~e~ 296 (308)
..+.|+|..+|+......-++
T Consensus 98 -~~~Vk~kil~li~~W~~~f~~ 118 (140)
T 3ldz_A 98 -HPKVCEKLKALMVEWTDEFKN 118 (140)
T ss_dssp -CHHHHHHHHHHHHHHHHHHTT
T ss_pred -CHHHHHHHHHHHHHHHHHhCC
Confidence 788999999999877654333
No 105
>4ady_A RPN2, 26S proteasome regulatory subunit RPN2; protein binding, PC repeat; 2.70A {Saccharomyces cerevisiae} PDB: 4b4t_N
Probab=35.99 E-value=2.2e+02 Score=30.67 Aligned_cols=32 Identities=13% Similarity=0.048 Sum_probs=20.3
Q ss_pred cHHHHHHHhcC-CCHHHHHHHHHHHHHHhcCCc
Q 044095 221 AVPVMVTMMGQ-MAGRGKEYAISVLAVIYGGGD 252 (308)
Q Consensus 221 aIp~LV~lLr~-gS~~~KE~AVa~L~sLC~~~~ 252 (308)
+|..|++.+.+ ..+.-|..||..|..|.....
T Consensus 578 aIq~LL~~~~~d~~d~VRraAViaLGlI~~g~~ 610 (963)
T 4ady_A 578 AVKRLLHVAVSDSNDDVRRAAVIALGFVLLRDY 610 (963)
T ss_dssp HHHHHHHHHHHCSCHHHHHHHHHHHHHHTSSSC
T ss_pred HHHHHHHHhccCCcHHHHHHHHHHHHhhccCCH
Confidence 45555555543 466677778888877765543
No 106
>3g2s_A C-terminal fragment of sortilin-related receptor; ADP-ribosylation factor binding protein GGA1, VHS, acidic- cluster dileucine signal, sorla; 1.70A {Homo sapiens} SCOP: a.118.9.2 PDB: 3g2t_A* 3g2u_A 3g2v_A* 3g2w_A 1ujk_A* 1jwf_A 1ujj_A 1jwg_A* 1py1_A*
Probab=35.06 E-value=70 Score=26.51 Aligned_cols=76 Identities=12% Similarity=0.032 Sum_probs=52.4
Q ss_pred cHHHHHHHhcCCCHHHHHHHHHHHHHHhcCCcchh-hccCCcc-HHHHHHHHHh---C-CCCHHHHHHHHHHHHHHHhcC
Q 044095 221 AVPVMVTMMGQMAGRGKEYAISVLAVIYGGGDQLV-VAAPPEE-VARAVELALQ---G-NCTPRGRRKGTQLLKSLKEYG 294 (308)
Q Consensus 221 aIp~LV~lLr~gS~~~KE~AVa~L~sLC~~~~~~v-~~a~~~g-v~~Ll~Lllq---g-~cS~raKrKA~~LLklL~~~~ 294 (308)
++..|.+.|........-+|+.+|=.+..+++... .++.... +-.|+.++.. | .-....|+|..+|++.....-
T Consensus 49 a~ral~krl~~~n~~v~l~AL~LLe~cvkNCG~~fh~eias~~Fl~eL~kl~~~k~~~~~~~~~Vk~kil~li~~W~~~f 128 (149)
T 3g2s_A 49 ATRLLAHKIQSPQEWEAIQALTVLETCMKSCGKRFHDEVGKFRFLNELIKVVSPKYLGSRTSEKVKNKILELLYSWTVGL 128 (149)
T ss_dssp HHHHHHHHHTCSSHHHHHHHHHHHHHHHHHCCHHHHHHHTSHHHHHHHHHHHCTTTTGGGSCHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHhcCHHHHHHHhhHHHHHHHHHHHcccccCCCCCHHHHHHHHHHHHHHHHHh
Confidence 56778888888889998999998888878887654 3444444 3355544431 1 126788999998888777654
Q ss_pred CC
Q 044095 295 QP 296 (308)
Q Consensus 295 e~ 296 (308)
.+
T Consensus 129 ~~ 130 (149)
T 3g2s_A 129 PE 130 (149)
T ss_dssp TT
T ss_pred CC
Confidence 43
No 107
>1dvp_A HRS, hepatocyte growth factor-regulated tyrosine kinase substrate; VHS, FYVE, zinc finger, superhelix, transferase; HET: CIT; 2.00A {Drosophila melanogaster} SCOP: a.118.9.2 g.50.1.1
Probab=33.24 E-value=63 Score=28.01 Aligned_cols=69 Identities=12% Similarity=0.081 Sum_probs=48.1
Q ss_pred cHHHHHHHHhccChhHHHHHHHHHHHHhcC--hhhHHHHHhccCcHHHHHHHhcC-CCHHHHHHHHHHHHHHh
Q 044095 179 AVGAVIEVVAELDAAAGERALAALELMCTV--AEGAEETRAHALAVPVMVTMMGQ-MAGRGKEYAISVLAVIY 248 (308)
Q Consensus 179 AVp~LVeLL~~~s~~~~E~ALAiL~~La~~--~eGr~aI~~~~gaIp~LV~lLr~-gS~~~KE~AVa~L~sLC 248 (308)
||..|..-|...+...+-.||.+|+.+..+ ..=..+|+. ...+..|++++.+ ....-|+.++.++..-.
T Consensus 43 a~r~l~krl~~~n~~~~l~aL~Lle~~vkNcG~~f~~eva~-~~fl~~l~~l~~~~~~~~Vk~kil~li~~W~ 114 (220)
T 1dvp_A 43 AFAAIKKKMNSPNPHSSCYSLLVLESIVKNCGAPVHEEVFT-KENCEMFSSFLESTPHENVRQKMLELVQTWA 114 (220)
T ss_dssp HHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSHHHHHHHHSS-HHHHHHHHHHHHHCSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHhccCHHHHHHHHh-HHHHHHHHHHhcCCCcHHHHHHHHHHHHHHH
Confidence 344555666666777788899999999874 223456665 4478888888865 46778888877776654
No 108
>3u0r_A Apoptosis inhibitor 5; heat repeat, armadillo repeat, lysine acetylation; 2.50A {Homo sapiens} PDB: 3v6a_A
Probab=33.12 E-value=57 Score=32.73 Aligned_cols=48 Identities=6% Similarity=-0.089 Sum_probs=30.9
Q ss_pred chHHHHHHHhCCCCCCCCCcHHHHHHHhcCCCCcHHHHHHhCcHHHHHHHHhcc
Q 044095 137 AALYLLERSLLPNPPSDQACQPELMRALCLAESNRRVAVEAGAVGAVIEVVAEL 190 (308)
Q Consensus 137 ~AI~lLV~LL~~g~~~~k~~a~a~l~aL~~~~~Nr~~iV~aGAVp~LVeLL~~~ 190 (308)
.||..+.+|.+++....++.+-.-+-.||.. +|..+++ .+|++||...
T Consensus 65 ~Ai~a~lDLcEDed~~IR~qaik~Lp~~ck~-~~i~kia-----DvL~QlLqtd 112 (507)
T 3u0r_A 65 SAINAQLDLCEDEDVSIRRQAIKELPQFATG-ENLPRVA-----DILTQLLQTD 112 (507)
T ss_dssp HHHHHHHHHHTCSSHHHHHHHHHHGGGGCCT-TCHHHHH-----HHHHHHTTCC
T ss_pred HHHHHHHHHHhcccHHHHHHHHHhhHHHhhh-hhhhhHH-----HHHHHHHhcc
Confidence 6888889998877643342111222256776 7777765 5888888743
No 109
>2knp_A Mcocc-1; disulfide-rich peptides, cystine knot motif, cytotoxic, melanoma cell LINE, non-hemolytic, seeds extract, unknown function; NMR {Momordica cochinchinensis}
Probab=31.64 E-value=11 Score=23.56 Aligned_cols=19 Identities=32% Similarity=0.670 Sum_probs=12.4
Q ss_pred cccccccccccc-cCCCCCC
Q 044095 17 SCGFFCHCTQSV-LSPTNSH 35 (308)
Q Consensus 17 ~~~~~~~~~~~~-~~~~~~~ 35 (308)
-||+|+.|..-. --||+||
T Consensus 6 qcglfrscgggcrcwptvtp 25 (33)
T 2knp_A 6 QCGLFRSCGGGCRCWPTVTP 25 (33)
T ss_dssp EEETTCCCCSSCCEEECSST
T ss_pred ccceeeccCCceeeccccCC
Confidence 489999887643 2355554
No 110
>1mhq_A ADP-ribosylation factor binding protein GGA2; super helix, protein transport; 2.20A {Homo sapiens} SCOP: a.118.9.2
Probab=28.76 E-value=73 Score=26.27 Aligned_cols=76 Identities=12% Similarity=0.105 Sum_probs=51.7
Q ss_pred cHHHHHHHhcCCCHHHHHHHHHHHHHHhcCCcchh-hccCCccH-HHHHHHHHh---CC-CCHHHHHHHHHHHHHHHhcC
Q 044095 221 AVPVMVTMMGQMAGRGKEYAISVLAVIYGGGDQLV-VAAPPEEV-ARAVELALQ---GN-CTPRGRRKGTQLLKSLKEYG 294 (308)
Q Consensus 221 aIp~LV~lLr~gS~~~KE~AVa~L~sLC~~~~~~v-~~a~~~gv-~~Ll~Lllq---g~-cS~raKrKA~~LLklL~~~~ 294 (308)
++..|.+.|..+.....-+|+.+|=.+-.+++... .++..... -.|+.++.. |. -....|+|+.+|++.....-
T Consensus 39 a~rai~krl~~~n~~vql~AL~LLe~~vkNCG~~fh~evas~~Fl~eL~kl~~~k~~~~~~~~~Vk~kil~li~~W~~~f 118 (148)
T 1mhq_A 39 APWLLAHKIQSPQEKEALYALTVLEMCMNHCGEKFHSEVAKFRFLNELIKVLSPKYLGSWATGKVKGRVIEILFSWTVWF 118 (148)
T ss_dssp HHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSCHHHHHHHTSHHHHHHHHHTTCCSTTSCCCCHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHHHcCHHHHHHHhhHHHHHHHHHHHccccCCCCCCHHHHHHHHHHHHHHHHHc
Confidence 56778888988899999999998888888877554 34444443 344433321 11 25788999988888776554
Q ss_pred CC
Q 044095 295 QP 296 (308)
Q Consensus 295 e~ 296 (308)
.+
T Consensus 119 ~~ 120 (148)
T 1mhq_A 119 PE 120 (148)
T ss_dssp TT
T ss_pred CC
Confidence 43
No 111
>3tjz_B Coatomer subunit gamma; protein trafficking, golgi membrane, protein transport-prote binding complex; HET: GNP; 2.90A {Bos taurus}
Probab=27.35 E-value=3.6e+02 Score=25.23 Aligned_cols=68 Identities=7% Similarity=-0.081 Sum_probs=47.5
Q ss_pred HHHHHHHHhccChhHHHHHHHHHHHHhcChhhHHHHHhccCcHHHHHHHhcCCCHHHHHHHHHHHHHHhcCCc
Q 044095 180 VGAVIEVVAELDAAAGERALAALELMCTVAEGAEETRAHALAVPVMVTMMGQMAGRGKEYAISVLAVIYGGGD 252 (308)
Q Consensus 180 Vp~LVeLL~~~s~~~~E~ALAiL~~La~~~eGr~aI~~~~gaIp~LV~lLr~gS~~~KE~AVa~L~sLC~~~~ 252 (308)
++.+.+.|.|.+......|+-....|... ..+.+ + +.+..+-+++.+.+.--.-+|+++|+.++..++
T Consensus 141 ~~~lk~~L~d~~pyVRk~A~l~~~kL~~~--~pe~v-~--~~~~~l~~ll~d~n~~V~~~Al~lL~ei~~~d~ 208 (355)
T 3tjz_B 141 ERYMKQAIVDKVPSVSSSALVSSLHLLKC--SFDVV-K--RWVNEAQEAASSDNIMVQYHALGLLYHVRKNDR 208 (355)
T ss_dssp HHHHHHHHTCSSHHHHHHHHHHHHHHTTT--CHHHH-H--TTHHHHHHHTTCSSHHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHcCCCCHHHHHHHHHHHHHHhcc--CHHHH-H--HHHHHHHHHhcCCCccHHHHHHHHHHHHHhhch
Confidence 34455556677777777776666666543 33333 3 478888888888777777899999999988764
No 112
>2of3_A ZYG-9; multifunctional macromolecule, kinetochore, microtubule, XMAP215, STU2, DIS1, microtubule associated protein, structural protein; 1.90A {Caenorhabditis elegans}
Probab=26.50 E-value=56 Score=29.76 Aligned_cols=64 Identities=16% Similarity=0.188 Sum_probs=48.7
Q ss_pred HhccChhHHHHHHHHHHHHhcChhhHHHHHhccCcH---HHHHHHhcCCCHHHHHHHHHHHHHHhcCCcchh
Q 044095 187 VAELDAAAGERALAALELMCTVAEGAEETRAHALAV---PVMVTMMGQMAGRGKEYAISVLAVIYGGGDQLV 255 (308)
Q Consensus 187 L~~~s~~~~E~ALAiL~~La~~~eGr~aI~~~~gaI---p~LV~lLr~gS~~~KE~AVa~L~sLC~~~~~~v 255 (308)
+.+.+..+.++++..|..|-.. -|.. . ..++ +.+.++|.+....-|+.|+.+|..++...++++
T Consensus 176 ~ksKN~R~R~e~l~~l~~li~~-~G~~---~-~~~l~~~~~ia~ll~D~d~~VR~aAl~~lve~y~~~Gd~v 242 (266)
T 2of3_A 176 LKSKNARQRSECLLVIEYYITN-AGIS---P-LKSLSVEKTVAPFVGDKDVNVRNAAINVLVACFKFEGDQM 242 (266)
T ss_dssp GGCSCHHHHHHHHHHHHHHHHH-HCSG---G-GGGGCHHHHHGGGGGCSSHHHHHHHHHHHHHHHHHHTTHH
T ss_pred HccCCHHHHHHHHHHHHHHHHh-cCCC---c-cccccchHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhHHH
Confidence 3445778888888888888653 2333 1 3478 999999999899999999999999987665554
No 113
>4f52_E Glomulin; cullin-ring E3 ligase, inhibitor, cell cycle-ligase-signalin complex; 3.00A {Homo sapiens}
Probab=26.45 E-value=88 Score=31.70 Aligned_cols=63 Identities=8% Similarity=0.074 Sum_probs=43.0
Q ss_pred cHHHHHHhCcHHHHHHHHhccChhHHHHHHHHHHHHhcChhhHHHHHhc-cCcHHHHHHHhc--CCCHHHHHHHHHHHHH
Q 044095 170 NRRVAVEAGAVGAVIEVVAELDAAAGERALAALELMCTVAEGAEETRAH-ALAVPVMVTMMG--QMAGRGKEYAISVLAV 246 (308)
Q Consensus 170 Nr~~iV~aGAVp~LVeLL~~~s~~~~E~ALAiL~~La~~~eGr~aI~~~-~gaIp~LV~lLr--~gS~~~KE~AVa~L~s 246 (308)
+..+-++.|.++.|+++|.|. .|+..+.+. -..|..||..|- +.++..++++-.+|-.
T Consensus 34 ~~~~~l~~g~~~~l~eilqDe-------------------~n~~l~~~igWdLv~~lv~~l~~~~~~~~~~~~s~~iL~~ 94 (596)
T 4f52_E 34 AGQRCIEEGHTDQLLEIIQNE-------------------KNKVIIKNMGWNLVGPVVRCLLCKDKEDSKRKVYFLIFDL 94 (596)
T ss_dssp HHHHHHSSSCSHHHHHHHTTC-------------------TTHHHHHHTGGGGHHHHHHHHHTSCCCSSSTHHHHHHHHH
T ss_pred HHHHHcCcccHHHHHHHHhCc-------------------chhHHHHHcCcccHHHHHHHHhhccccccchhHHHHHHHH
Confidence 456677889999999999763 222333322 258899999773 4577777788888777
Q ss_pred HhcCC
Q 044095 247 IYGGG 251 (308)
Q Consensus 247 LC~~~ 251 (308)
|+..+
T Consensus 95 la~lc 99 (596)
T 4f52_E 95 LVKLC 99 (596)
T ss_dssp HHHHS
T ss_pred HHHhC
Confidence 77644
No 114
>3tjz_B Coatomer subunit gamma; protein trafficking, golgi membrane, protein transport-prote binding complex; HET: GNP; 2.90A {Bos taurus}
Probab=25.38 E-value=4.2e+02 Score=24.77 Aligned_cols=69 Identities=7% Similarity=-0.059 Sum_probs=48.6
Q ss_pred cHHHHHHHHhccChhHHHHHHHHHHHHhcChhhHHHHHhccCcHHHHHHHhcCCCHHHHHHHHHHHHHHhcCCcch
Q 044095 179 AVGAVIEVVAELDAAAGERALAALELMCTVAEGAEETRAHALAVPVMVTMMGQMAGRGKEYAISVLAVIYGGGDQL 254 (308)
Q Consensus 179 AVp~LVeLL~~~s~~~~E~ALAiL~~La~~~eGr~aI~~~~gaIp~LV~lLr~gS~~~KE~AVa~L~sLC~~~~~~ 254 (308)
++..|..=+.+.++-.+-.|+..|..+...+ |.+ ..++.+.+.|.+..+--|..|+-..+.|+....+.
T Consensus 105 v~Nsl~kDl~~~N~~iR~lALRtL~~I~~~~-----m~~--~l~~~lk~~L~d~~pyVRk~A~l~~~kL~~~~pe~ 173 (355)
T 3tjz_B 105 VTSSLTKDMTGKEDSYRGPAVRALCQITDST-----MLQ--AIERYMKQAIVDKVPSVSSSALVSSLHLLKCSFDV 173 (355)
T ss_dssp GHHHHHHHHHSSCHHHHHHHHHHHHHHCCTT-----THH--HHHHHHHHHHTCSSHHHHHHHHHHHHHHTTTCHHH
T ss_pred HHHHHHhhcCCCcHhHHHHHHHHHhcCCCHH-----HHH--HHHHHHHHHcCCCCHHHHHHHHHHHHHHhccCHHH
Confidence 3555555556667777888888888887632 222 23455667777788889999999999998776543
No 115
>1ho8_A Vacuolar ATP synthase subunit H; heat repeat, hydrolase; 2.95A {Saccharomyces cerevisiae} SCOP: a.118.1.9
Probab=23.02 E-value=1.9e+02 Score=28.75 Aligned_cols=68 Identities=13% Similarity=0.134 Sum_probs=49.4
Q ss_pred cHHHHHHHHhc----------cChhHHHHHHHHHHHHhc-ChhhHHHHHhccCcHHHHHHHhcCCCHHHHHHHHHHHHHH
Q 044095 179 AVGAVIEVVAE----------LDAAAGERALAALELMCT-VAEGAEETRAHALAVPVMVTMMGQMAGRGKEYAISVLAVI 247 (308)
Q Consensus 179 AVp~LVeLL~~----------~s~~~~E~ALAiL~~La~-~~eGr~aI~~~~gaIp~LV~lLr~gS~~~KE~AVa~L~sL 247 (308)
.+..|+++|.+ .+..+..-|+.=+..++. +++||..+.+ -|+=..++++|....++-|.+|+-++..+
T Consensus 396 llk~L~~iL~~~~~~~~~~~s~d~~~laVAc~Digefvr~~P~gr~i~~~-lg~K~~VM~Lm~h~d~~Vr~~AL~avQkl 474 (480)
T 1ho8_A 396 IFRQLIELLQAKVRNGDVNAKQEKIIIQVALNDITHVVELLPESIDVLDK-TGGKADIMELLNHSDSRVKYEALKATQAI 474 (480)
T ss_dssp HHHHHHHHHHHHHHTTCCCSHHHHHHHHHHHHHHHHHHHHCTTHHHHHHH-HSHHHHHHHHTSCSSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhhccccccccCCCcceEEeecccHHHHHHHCcchhHHHHH-cCcHHHHHHHhcCCCHHHHHHHHHHHHHH
Confidence 45689999963 133344445555666666 5899987766 57788888899888899999998877665
No 116
>2h5n_A Hypothetical protein PG_1108; SAD, MCSG,PSI, structural genomics, PR structure initiative; 2.01A {Porphyromonas gingivalis} SCOP: a.287.1.2
Probab=22.61 E-value=2.9e+02 Score=21.87 Aligned_cols=85 Identities=12% Similarity=0.112 Sum_probs=52.2
Q ss_pred CCCcHHHHHHhCcHHHHHHHHh-ccC--hhHHHHHHHHHHHHhcChhhHHHHHhcc--CcHHHHHHHhcCCCHHHHHHHH
Q 044095 167 AESNRRVAVEAGAVGAVIEVVA-ELD--AAAGERALAALELMCTVAEGAEETRAHA--LAVPVMVTMMGQMAGRGKEYAI 241 (308)
Q Consensus 167 ~~~Nr~~iV~aGAVp~LVeLL~-~~s--~~~~E~ALAiL~~La~~~eGr~aI~~~~--gaIp~LV~lLr~gS~~~KE~AV 241 (308)
-+.|+..++. .+..++.+.. |+. ..-.+....++..+--.++-..++.+.. -.....+++++..+...|..-+
T Consensus 11 ~~~~~~~l~a--~~aLl~~VA~ADG~v~~~E~~~l~~~l~~lgl~~~e~~~l~~~~~~~~~~~~~~~~~~~~~e~r~~ll 88 (133)
T 2h5n_A 11 MTFSGQELTA--IIKMAKSMVMADGKIKPAEIAVMTREFMRFGILQDQVDLLLKASDSIEASQAVALIARMDEERKKYVA 88 (133)
T ss_dssp CCCCHHHHHH--HHHHHHHHHHTTSCCCHHHHHHHHHHHGGGTCCHHHHHHHHHHHTTSCHHHHHHHHHTSCHHHHHHHH
T ss_pred CCCccHHHHH--HHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCcCHHHHHHHHHHHHhccHHHHHHHHHcCCHHHHHHHH
Confidence 3577777776 5666666654 442 3333334444444433443333333322 2456667778888899999999
Q ss_pred HHHHHHhcCCcc
Q 044095 242 SVLAVIYGGGDQ 253 (308)
Q Consensus 242 a~L~sLC~~~~~ 253 (308)
.+||.++..|+.
T Consensus 89 ~~L~~IA~ADG~ 100 (133)
T 2h5n_A 89 SYLGVIMASDGD 100 (133)
T ss_dssp HHHHHHSCBTTB
T ss_pred HHHHHHhhcCCC
Confidence 999999987763
No 117
>2x19_B Importin-13; nuclear transport, protein transport; HET: GTP; 2.80A {Homo sapiens} PDB: 2xwu_B
Probab=20.34 E-value=3.4e+02 Score=27.59 Aligned_cols=68 Identities=12% Similarity=0.166 Sum_probs=45.5
Q ss_pred HHHHHHHHh---ccChhHHHHHHHHHHHHhcC-hhhHHHHHhccCcHHHHHHHhcCCCHHHHHHHHHHHHHHhcCCc
Q 044095 180 VGAVIEVVA---ELDAAAGERALAALELMCTV-AEGAEETRAHALAVPVMVTMMGQMAGRGKEYAISVLAVIYGGGD 252 (308)
Q Consensus 180 Vp~LVeLL~---~~s~~~~E~ALAiL~~La~~-~eGr~aI~~~~gaIp~LV~lLr~gS~~~KE~AVa~L~sLC~~~~ 252 (308)
++.++.+|. +....+...++.+|..++.. .+.. ... ...++.|++.|.+ .+-+.+|+.+|..+|...+
T Consensus 488 l~~l~~~l~~l~~~~~~vr~~~~~~l~~~~~~l~~~~-~~l--~~vl~~l~~~l~~--~~V~~~A~~al~~l~~~~~ 559 (963)
T 2x19_B 488 VPGLIGLIPRISISNVQLADTVMFTIGALSEWLADHP-VMI--NSVLPLVLHALGN--PELSVSSVSTLKKICRECK 559 (963)
T ss_dssp HHHHHHHGGGSCCCSHHHHHHHHHHHHHTHHHHHHCH-HHH--TTTHHHHHHHTTC--GGGHHHHHHHHHHHHHHTG
T ss_pred HHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHHhCH-HHH--HHHHHHHHHHhCC--chHHHHHHHHHHHHHHHHH
Confidence 344555442 23456777888888887764 2222 222 3578888888865 7788999999999997544
No 118
>2x19_B Importin-13; nuclear transport, protein transport; HET: GTP; 2.80A {Homo sapiens} PDB: 2xwu_B
Probab=20.04 E-value=3.2e+02 Score=27.84 Aligned_cols=111 Identities=10% Similarity=0.117 Sum_probs=62.9
Q ss_pred hCcHHHHHHHHhccChhHHHHHHHHHHHHhcChhhHHHHHhc-cCcHHHHHHHhcC--CCHHHHHHHHHHHHHHhcCCc-
Q 044095 177 AGAVGAVIEVVAELDAAAGERALAALELMCTVAEGAEETRAH-ALAVPVMVTMMGQ--MAGRGKEYAISVLAVIYGGGD- 252 (308)
Q Consensus 177 aGAVp~LVeLL~~~s~~~~E~ALAiL~~La~~~eGr~aI~~~-~gaIp~LV~lLr~--gS~~~KE~AVa~L~sLC~~~~- 252 (308)
..+++.|++.|.+ ..+...|..+|..|+. +.+..+..+ ...+..|.+++.+ ...+.++.++.++..+....+
T Consensus 528 ~~vl~~l~~~l~~--~~V~~~A~~al~~l~~--~~~~~l~p~~~~il~~l~~~l~~~~~~~~~~~~~~eai~~i~~~~~~ 603 (963)
T 2x19_B 528 NSVLPLVLHALGN--PELSVSSVSTLKKICR--ECKYDLPPYAANIVAVSQDVLMKQIHKTSQCMWLMQALGFLLSALQV 603 (963)
T ss_dssp TTTHHHHHHHTTC--GGGHHHHHHHHHHHHH--HTGGGCTTTHHHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHHTTSCH
T ss_pred HHHHHHHHHHhCC--chHHHHHHHHHHHHHH--HHHHHHHhhHHHHHHHHHHHhccCCCChHHHHHHHHHHHHHHhcCCH
Confidence 4677778877754 6788999999999984 233333221 1234444555664 367889999999988875432
Q ss_pred chhhccCCccHHHHHH---HHHhCCCCHHHHHHHHHHHHHHH
Q 044095 253 QLVVAAPPEEVARAVE---LALQGNCTPRGRRKGTQLLKSLK 291 (308)
Q Consensus 253 ~~v~~a~~~gv~~Ll~---Lllqg~cS~raKrKA~~LLklL~ 291 (308)
+........-+..+.. .+.+...++..++....+|+.|.
T Consensus 604 ~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~l~~l~ 645 (963)
T 2x19_B 604 EEILKNLHSLISPYIQQLEKLAEEIPNPSNKLAIVHILGLLS 645 (963)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSSCSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHH
Confidence 2221111111222222 22223236777776666666553
Done!