BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 044097
(439 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225427562|ref|XP_002266662.1| PREDICTED: uncharacterized protein LOC100242504 [Vitis vinifera]
gi|296085502|emb|CBI29234.3| unnamed protein product [Vitis vinifera]
Length = 553
Score = 481 bits (1238), Expect = e-133, Method: Compositional matrix adjust.
Identities = 261/486 (53%), Positives = 315/486 (64%), Gaps = 54/486 (11%)
Query: 7 SSPLLLTPDLNRSDSLSRLSYPTPRLRVSDKQCSIKTIRLSRTHINPTAHNDRQPLHLHY 66
S PL + DL + +L L + + R ++ S R PT+ P
Sbjct: 11 SHPLHRSQDLKPNPNLPFLQHRSLRFSLNFSCVSGPRYRPPCLPALPTSGVSPPPPEQPS 70
Query: 67 KLP---LQLASSSVLLFLGFGARICSAGPTQLPLTPAVN----QQDQLLD-------QDT 112
+LP LQ+AS S +LFLGF R CSA + P A Q+ ++ D +DT
Sbjct: 71 RLPPDLLQIASVSAILFLGFSVRACSATSGRFPAVVAAECRTVQEQRIQDSDGVGKSEDT 130
Query: 113 EQKEDEKLNQEFENWKWKTYALTVPLRVVSLQNSVPQSWVKDFMRSQGKRLKFQMNLCAS 172
E ED++L + F+ WK K YALTVPLR+V+L+ S+P SWVKDFM+SQG+RL+ N S
Sbjct: 131 ENLEDKELKEAFKRWKSKPYALTVPLRIVTLRGSLPPSWVKDFMQSQGRRLRLLSNFRGS 190
Query: 173 IDGIVNNLSTPFNK--------------------LSFAIKKRFIEPIAEAEDQDWFKRLS 212
+ I + L P +K L AI K IEPI EDQDWF+ LS
Sbjct: 191 LQDIFSELCRPLSKGKIEPKSALAADIVTVGDSWLDLAINKGIIEPIQGVEDQDWFRGLS 250
Query: 213 HKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELA 272
+KWKVYLR N GE+D GKIWAAPYRWG+M I YKKSKF+ H LAPIEDW D W PELA
Sbjct: 251 YKWKVYLRRNSKGELDAEGKIWAAPYRWGSMVIAYKKSKFEKHKLAPIEDWADLWRPELA 310
Query: 273 GRISMVNSPREVI-------------------VAGGKIAVQQNLALLANQVRLFDSTHYL 313
GRISM++SPREV+ V GG+ AVQQNL LLA QVR FDSTHY+
Sbjct: 311 GRISMIDSPREVVGAVLKYMGASYNTDNIELQVNGGRNAVQQNLMLLAKQVRCFDSTHYI 370
Query: 314 KAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLE-TKQIGG 372
KA +GDVWVAVGWSSDVLPA KRMSNVAV+VPKSGASLWADLWAIP+ S+LE ++QIGG
Sbjct: 371 KALSVGDVWVAVGWSSDVLPAAKRMSNVAVIVPKSGASLWADLWAIPSTSKLERSRQIGG 430
Query: 373 QVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALESTLVKLPEELLKGKPSVDTNL 432
+VRGPSP+IHQWIEFCLQ ARA PF +EVIPGASPSA+E V+ P EL KGKP ++TNL
Sbjct: 431 RVRGPSPVIHQWIEFCLQAARAFPFTEEVIPGASPSAIECASVEAPRELTKGKPKLETNL 490
Query: 433 IAGVPP 438
IAG+PP
Sbjct: 491 IAGMPP 496
>gi|224074577|ref|XP_002304393.1| predicted protein [Populus trichocarpa]
gi|222841825|gb|EEE79372.1| predicted protein [Populus trichocarpa]
Length = 424
Score = 478 bits (1229), Expect = e-132, Method: Compositional matrix adjust.
Identities = 236/363 (65%), Positives = 277/363 (76%), Gaps = 40/363 (11%)
Query: 116 EDEKLNQ-EFENWKWKTYALTVPLRVVSLQNSVPQSWVKDFMRSQGKRLKFQMNLCASID 174
ED++LN EFENWK KT+AL+VPLR+V+L+ SVP SW+KDF++SQG+RL+F++ S++
Sbjct: 3 EDKELNAAEFENWKLKTFALSVPLRIVALRGSVPPSWIKDFIQSQGRRLRFRVKYLGSLE 62
Query: 175 GIVNNLSTPFNK--------------------LSFAIKKRFIEPIAEAEDQDWFKRLSHK 214
I +++S FNK LSFAIK IEP+ E+QDWFK LS K
Sbjct: 63 NIFSDISASFNKRNIGPMSTVASDIVSVGDSWLSFAIKNAIIEPVRGVEEQDWFKGLSDK 122
Query: 215 WKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGR 274
WKVYLR N GEIDP G+IWAAPYRWG+M I YKKSKFQ H LAPIEDW D W PELAGR
Sbjct: 123 WKVYLRRNHEGEIDPEGEIWAAPYRWGSMVIAYKKSKFQEHKLAPIEDWADLWRPELAGR 182
Query: 275 ISMVNSPREVI-------------------VAGGKIAVQQNLALLANQVRLFDSTHYLKA 315
ISMV+SPREV+ V GGK AVQQNLALL QVRLFDS +YLK
Sbjct: 183 ISMVDSPREVVGSVLKYMGASYNTKNIDLQVPGGKNAVQQNLALLGKQVRLFDSMYYLKT 242
Query: 316 FGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGQVR 375
F +GD WVAVGWSSDVLP KRMSNVAVVVPKSG SLWADLWAIPAA++LET QIGG++R
Sbjct: 243 FSMGDAWVAVGWSSDVLPIAKRMSNVAVVVPKSGTSLWADLWAIPAATKLETNQIGGRIR 302
Query: 376 GPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALESTLVKLPEELLKGKPSVDTNLIAG 435
GPSPLIHQWIEFCLQ ARALPFKQEVIPGA+PSA+E++++++P+EL KGKP +DTNLIAG
Sbjct: 303 GPSPLIHQWIEFCLQAARALPFKQEVIPGATPSAIENSVIEVPKELTKGKPKLDTNLIAG 362
Query: 436 VPP 438
VPP
Sbjct: 363 VPP 365
>gi|449455671|ref|XP_004145575.1| PREDICTED: uncharacterized protein LOC101211357 [Cucumis sativus]
gi|449485058|ref|XP_004157059.1| PREDICTED: uncharacterized protein LOC101230567 [Cucumis sativus]
Length = 549
Score = 474 bits (1220), Expect = e-131, Method: Compositional matrix adjust.
Identities = 240/418 (57%), Positives = 296/418 (70%), Gaps = 49/418 (11%)
Query: 69 PLQLASSSVLLF-----LGFGARICSAGPTQLPLTPAVN----QQDQLLDQDTEQKEDEK 119
PL+LA+S+VL G GAR A + LP + A + ++++++ E+ E++K
Sbjct: 70 PLRLAASAVLFLSFSIGFGIGARSSFAASSPLPPSLASDNYNLEEEKVVPSGDEKVEEKK 129
Query: 120 LNQEFENWKWKTYALTVPLRVVSLQNSVPQSWVKDFMRSQGKRLKFQMNLCASIDGIVNN 179
+++ FE WK K +ALTVPL VV+L++S+P SW+K+F++SQGKRLKF + S++ I +
Sbjct: 130 MDEAFEEWKSKKFALTVPLNVVALRDSIPPSWIKEFIQSQGKRLKFTVKFNGSLESIFSE 189
Query: 180 LSTPFNK--------------------LSFAIKKRFIEPIAEAEDQDWFKRLSHKWKVYL 219
LS P K L+FAIKK IEPI + EDQDW+ LS KWKV L
Sbjct: 190 LSVPVGKSKVKPSSIMVADVVSIGDSWLNFAIKKALIEPIQDVEDQDWYNNLSTKWKVLL 249
Query: 220 RSNDAGEIDPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVN 279
R N GEIDP GKIW+APYRWG M I Y K KF+ +NLAP+EDW D W PEL GRISMV+
Sbjct: 250 RRNSEGEIDPEGKIWSAPYRWGCMVIAYNKVKFRKNNLAPMEDWSDLWCPELRGRISMVD 309
Query: 280 SPREVI-------------------VAGGKIAVQQNLALLANQVRLFDSTHYLKAFGIGD 320
SPREVI + GG+ A+ QNL LLA QVRLFDS HYLKAF +GD
Sbjct: 310 SPREVIGAVLKYMGASYNTENISSQIPGGRDAIHQNLTLLAKQVRLFDSAHYLKAFAVGD 369
Query: 321 VWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGQVRGPSPL 380
VWVAVGWSSDVLP VKRMSN+AVVVPKSG+SLWADLWAIPA SR+ET+ IGG+VRGPSPL
Sbjct: 370 VWVAVGWSSDVLPVVKRMSNIAVVVPKSGSSLWADLWAIPATSRIETEPIGGRVRGPSPL 429
Query: 381 IHQWIEFCLQTARALPFKQEVIPGASPSALESTLVKLPEELLKGKPSVDTNLIAGVPP 438
HQWIEFCLQTARALPFKQEV+PGASP+A+E +V +P+EL +GKP +DTNLI GVPP
Sbjct: 430 FHQWIEFCLQTARALPFKQEVVPGASPAAIEGPVV-VPKELFEGKPKLDTNLIGGVPP 486
>gi|356559069|ref|XP_003547824.1| PREDICTED: uncharacterized protein LOC100781794 [Glycine max]
Length = 552
Score = 473 bits (1218), Expect = e-131, Method: Compositional matrix adjust.
Identities = 238/412 (57%), Positives = 287/412 (69%), Gaps = 46/412 (11%)
Query: 73 ASSSVLLFLGFGARICSAGPTQLPLTPAVNQQDQLLDQ-------DTEQKEDEKLNQEFE 125
A+ S LLFL FG R+C A P P V ++ + D D E D++L + F
Sbjct: 83 AAVSALLFLCFGVRMCLASSPPAPALPTVQEEQTVQDDHDGIKQDDKETVVDKELEEAFN 142
Query: 126 NWKWKTYALTVPLRVVSLQNSVPQSWVKDFMRSQGKRLKFQMNLCASIDGIVNNLSTPFN 185
WK KT+ALTVPL+VV+L+ S+P SW+KDF+ SQG+R+KF + AS++ I ++LS PF
Sbjct: 143 AWKSKTFALTVPLKVVALRGSIPPSWIKDFINSQGRRMKFNVKYYASLENIFSDLSIPFT 202
Query: 186 K--------------------LSFAIKKRFIEPIAEAEDQDWFKRLSHKWKVYLRSNDAG 225
K + FAI K IEPI + EDQ+WFK L KWKVYLR N G
Sbjct: 203 KGKIGPASALAADIVGIGDSWVKFAINKAIIEPIRDVEDQEWFKSLDDKWKVYLRRNREG 262
Query: 226 EIDPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVI 285
E+DP+G IWAAPYRWG M I YK +KFQ H LAP+EDW D W P+LAGRISMV+SPREVI
Sbjct: 263 EMDPKGDIWAAPYRWGCMVIAYKTNKFQKHKLAPVEDWADLWRPDLAGRISMVDSPREVI 322
Query: 286 -------------------VAGGKIAVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVG 326
V GG+ AV+ NLALLA QVRLFDS++YLKAFG+GDVWVAVG
Sbjct: 323 GAVLKYMGASYNTNDINMEVNGGRDAVKHNLALLAKQVRLFDSSNYLKAFGVGDVWVAVG 382
Query: 327 WSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGQVRGPSPLIHQWIE 386
WSSD++PA KRMSNVAVVVPKSGASLWADLWAIPAASR++T +IGG++RGPSPLIHQWIE
Sbjct: 383 WSSDIIPAAKRMSNVAVVVPKSGASLWADLWAIPAASRIQTNRIGGRIRGPSPLIHQWIE 442
Query: 387 FCLQTARALPFKQEVIPGASPSALESTLVKLPEELLKGKPSVDTNLIAGVPP 438
FCLQ+ARALPFKQEVIPGASPS L+ +P EL KG P ++ NL+ G PP
Sbjct: 443 FCLQSARALPFKQEVIPGASPSHLQGHSANVPVELTKGGPRLNGNLVDGAPP 494
>gi|147822062|emb|CAN68081.1| hypothetical protein VITISV_021806 [Vitis vinifera]
Length = 875
Score = 473 bits (1216), Expect = e-130, Method: Compositional matrix adjust.
Identities = 243/434 (55%), Positives = 289/434 (66%), Gaps = 65/434 (14%)
Query: 70 LQLASSSVLLFLGFGARICSAGPTQLPLTPAVN----QQDQLLD-------QDTEQKEDE 118
LQ+AS S +LFLGF R CSA + P A Q+ ++ D +DTE ED+
Sbjct: 385 LQIASVSAILFLGFSVRACSATSGRFPAVVAAECRTVQEQRIQDSDGVGKSEDTENLEDK 444
Query: 119 KLNQEFENWKWKTYALTVPLRVVSLQNSVPQSWVKDFMRSQGKRLKFQMNLCASIDGIVN 178
+L + F+ WK K YALTVPLR+V+L+ S+P SWVKDFM+SQG+RL+ N S+ I +
Sbjct: 445 ELKEAFKRWKSKPYALTVPLRIVTLRGSLPPSWVKDFMQSQGRRLRLLSNFRGSLQDIFS 504
Query: 179 NLSTPFNK--------------------LSFAIKKRFIEPIAEAEDQDWFKRLSHKWKVY 218
L P +K L AI K IEPI EDQDWF+ LS+KWK Y
Sbjct: 505 ELCRPLSKGKIEPKSALAADIVTVGDSWLDLAINKGIIEPIQGVEDQDWFRGLSYKWKGY 564
Query: 219 LR--------------SNDAGEIDPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWK 264
+ N GE+D GKIWAAPYRWG+M I YKKSKF+ H LAPIEDW
Sbjct: 565 FKFDTDWFRSFYVIFKRNSKGELDAEGKIWAAPYRWGSMVIAYKKSKFEKHKLAPIEDWA 624
Query: 265 DPWWPELAGRISMVNSPREVI-------------------VAGGKIAVQQNLALLANQVR 305
D W PELAGRISM++SPREV+ V GG+ AVQQNL LLA QVR
Sbjct: 625 DLWRPELAGRISMIDSPREVVGAVLKYMGASYNTDNIELQVNGGRNAVQQNLMLLAKQVR 684
Query: 306 LFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRL 365
FDSTHY+KA +GDVWVAVGWSSDVLPA KRMSNVAV+VPKSGASLWADLWAIP+ S+L
Sbjct: 685 CFDSTHYIKALSVGDVWVAVGWSSDVLPAAKRMSNVAVIVPKSGASLWADLWAIPSTSKL 744
Query: 366 E-TKQIGGQVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALESTLVKLPEELLKG 424
E ++QIGG+VRGPSP+IHQWIEFCLQ ARA PF +EVIPGASPSA+E V+ P EL KG
Sbjct: 745 ERSRQIGGRVRGPSPVIHQWIEFCLQAARAFPFTEEVIPGASPSAIECASVEAPRELTKG 804
Query: 425 KPSVDTNLIAGVPP 438
KP ++TNLIAG+PP
Sbjct: 805 KPKLETNLIAGMPP 818
>gi|255557729|ref|XP_002519894.1| transporter, putative [Ricinus communis]
gi|223540940|gb|EEF42498.1| transporter, putative [Ricinus communis]
Length = 507
Score = 469 bits (1207), Expect = e-129, Method: Compositional matrix adjust.
Identities = 244/417 (58%), Positives = 285/417 (68%), Gaps = 53/417 (12%)
Query: 68 LPLQLASSSVLLFLGFG-ARICSAGPTQLPLTPAVNQQDQLLDQDTEQKEDEKLNQEFEN 126
L + AS+S+ L G +R A P P+ Q+ + + FEN
Sbjct: 39 LGVAAASASLFFTLTIGVSRSSLAAPVSTPIAKIAPIQEDDCNDVDDD-------DAFEN 91
Query: 127 WKWKTYALTVPLRVVSLQNSVPQSWVKDFMRSQGKRLKFQMNLCASIDGIVNNLSTPFNK 186
WK KT+AL+VPLR+V+L+ S+P SW+KDFM+SQGKRL+ + L +D I ++LS F+
Sbjct: 92 WKSKTFALSVPLRIVALRGSIPPSWIKDFMQSQGKRLRLRSKLVGGLDNIFSDLSMSFSN 151
Query: 187 --------------------------LSFAIKKRFIEPIAEAEDQDWFKRLSHKWKVYLR 220
LSFAI+K IEPI EDQDWFK LS KWKVYLR
Sbjct: 152 NNIKRKVNIGSSSVAAADIVSIGDSWLSFAIQKALIEPIRGVEDQDWFKGLSDKWKVYLR 211
Query: 221 SNDAGEIDPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNS 280
N G IDP G+IW APYRWG+M I YKKSKFQ + LAPIEDW D W P+L GRISM++S
Sbjct: 212 RNCEGSIDPNGEIWGAPYRWGSMVIAYKKSKFQKNKLAPIEDWADLWRPDLKGRISMIDS 271
Query: 281 PREVI-------------------VAGGKIAVQQNLALLANQVRLFDSTHYLKAFGIGDV 321
PREV+ V GGK AVQ+NLAL QVRLFDS HYLKAFG+GDV
Sbjct: 272 PREVVGAVLKYMGASYNAKDIELEVHGGKSAVQENLALFGKQVRLFDSMHYLKAFGVGDV 331
Query: 322 WVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGQVRGPSPLI 381
WVAVGWSSDVLP KRMSN+AVVVPKSG+SLWADLWAIPAASRL T +IGG+VRGPSPLI
Sbjct: 332 WVAVGWSSDVLPVAKRMSNIAVVVPKSGSSLWADLWAIPAASRLATNRIGGRVRGPSPLI 391
Query: 382 HQWIEFCLQTARALPFKQEVIPGASPSALESTLVKLPEELLKGKPSVDTNLIAGVPP 438
HQWIEFCLQ ARA+PFKQEVIPGASPSALEST V++PEEL +GKP +DTNLIAGVPP
Sbjct: 392 HQWIEFCLQAARAMPFKQEVIPGASPSALESTPVEVPEELTRGKPRLDTNLIAGVPP 448
>gi|357517389|ref|XP_003628983.1| RING-H2 finger protein ATL5F [Medicago truncatula]
gi|355523005|gb|AET03459.1| RING-H2 finger protein ATL5F [Medicago truncatula]
Length = 786
Score = 464 bits (1195), Expect = e-128, Method: Compositional matrix adjust.
Identities = 241/442 (54%), Positives = 296/442 (66%), Gaps = 54/442 (12%)
Query: 48 RTHINPTAHNDRQPLHL-HYKLPLQLA--SSSVLLFLGFGARICSAGPTQLPLTPAVNQQ 104
R+ +P + + R+P KLP L + S+ LFL G R CSA LP V QQ
Sbjct: 56 RSPASPVSASRREPSETTSLKLPRALVRVTVSIALFLCCGIRACSAS---LPPLTNVVQQ 112
Query: 105 DQLLDQDTEQKE---------DEKLNQEFENWKWKTYALTVPLRVVSLQNSVPQSWVKDF 155
+Q + D + ++ D++L F WK KTYALTVPL+VV+L+ S+P SW+KDF
Sbjct: 113 EQTIQDDNDARKHDANENIDVDKELEASFNAWKSKTYALTVPLKVVALRGSIPPSWIKDF 172
Query: 156 MRSQGKRLKFQMNLCASIDGIVNNLSTPFNK--------------------LSFAIKKRF 195
+ SQG R+KF++ A+++ I ++LS PF K L FA++K
Sbjct: 173 INSQGNRMKFKVKYYATLESIFSDLSIPFTKGDHVPTTALAADIVGIGDSWLKFAVEKAI 232
Query: 196 IEPIAEAEDQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIGYKKSKFQNH 255
IEPI + E Q+WFK L+ KWKVYLR N GE+DP G IWAAPYRWG M I YK + FQ H
Sbjct: 233 IEPIKDVEGQEWFKNLAEKWKVYLRRNCEGEVDPEGDIWAAPYRWGCMVIAYKTNSFQKH 292
Query: 256 NLAPIEDWKDPWWPELAGRISMVNSPREVI-------------------VAGGKIAVQQN 296
LAPIEDW D W P+LAGRISMV+SPREV+ V GG+ AV+ N
Sbjct: 293 KLAPIEDWADLWRPDLAGRISMVDSPREVVGAVLKYMGASYNANDINLEVNGGRDAVKHN 352
Query: 297 LALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADL 356
LALLA QVRLFDS +YLKAFG+GDVWVAVGWSSD++P KRMSNVAV+VPKSGASLWADL
Sbjct: 353 LALLAKQVRLFDSENYLKAFGVGDVWVAVGWSSDIIPVAKRMSNVAVIVPKSGASLWADL 412
Query: 357 WAIPAASRLETKQIGGQVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALESTLVK 416
WAIPAAS+++T +IGG+VRGPSPLIHQWIEFCLQ+ARALPFKQEVIPGASP L+
Sbjct: 413 WAIPAASKIQTSRIGGRVRGPSPLIHQWIEFCLQSARALPFKQEVIPGASPPLLQGHSTN 472
Query: 417 LPEELLKGKPSVDTNLIAGVPP 438
+ EL KG+P + TNLI G PP
Sbjct: 473 VALELTKGRPRLVTNLIDGAPP 494
>gi|356560607|ref|XP_003548582.1| PREDICTED: uncharacterized protein LOC100809061 [Glycine max]
Length = 508
Score = 456 bits (1172), Expect = e-125, Method: Compositional matrix adjust.
Identities = 240/434 (55%), Positives = 295/434 (67%), Gaps = 51/434 (11%)
Query: 53 PTAHNDR-QPLHLHYKLPLQLASSSVLLFLGFGARICSAGPTQLPLTPAVNQQDQLL--D 109
PTA R QPL L K+ ++A S+VL FL FG R+C A Q +Q + D
Sbjct: 20 PTATRFRNQPLPL--KVFTRVAVSTVL-FLCFGVRMCLASSPPAAAALPTVQDEQTVQDD 76
Query: 110 QDTEQKE------DEKLNQEFENWKWKTYALTVPLRVVSLQNSVPQSWVKDFMRSQGKRL 163
QD +++ D++L + F WK KT+ALTVPL+VV+L+ S+P SW+KDF+ SQG+R+
Sbjct: 77 QDGRKQDNKETVVDKELEEAFNAWKSKTFALTVPLKVVALRGSIPPSWIKDFINSQGRRM 136
Query: 164 KFQMNLCASIDGIVNNLSTPFNK--------------------LSFAIKKRFIEPIAEAE 203
KF + AS++ + ++ S PF K L FAI K IEPI + E
Sbjct: 137 KFNVKYYASLENMFSDPSIPFTKGKIGPASALAADIVGIGDSWLKFAINKGIIEPIRDVE 196
Query: 204 DQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDW 263
DQ+WFK L KWKVYLR N GEIDP+G IWA+PYRWG M I YK +KFQ H LAP+EDW
Sbjct: 197 DQEWFKSLDDKWKVYLRRNCEGEIDPKGDIWASPYRWGCMVIAYKTNKFQKHKLAPVEDW 256
Query: 264 KDPWWPELAGRISMVNSPREVI-------------------VAGGKIAVQQNLALLANQV 304
D W P+LAGRI MV+SPREV+ V GG+ V+ NLALLA QV
Sbjct: 257 ADLWRPDLAGRILMVDSPREVVGAVLKYMGASYNTNDINAEVNGGRDVVKHNLALLAKQV 316
Query: 305 RLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 364
RLFDS++YLKAFG+GD WVAVGWSSD++PA KRMSNVAVVVPKSG SLWADLWAIPAASR
Sbjct: 317 RLFDSSNYLKAFGVGDAWVAVGWSSDIIPAAKRMSNVAVVVPKSGVSLWADLWAIPAASR 376
Query: 365 LETKQIGGQVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALESTLVKLPEELLKG 424
++T +IGG++RGPSPLIHQWIEFCLQ+ARALPFKQEVIPGASPS L+ +P EL KG
Sbjct: 377 IQTNRIGGRIRGPSPLIHQWIEFCLQSARALPFKQEVIPGASPSHLQGHSANVPVELTKG 436
Query: 425 KPSVDTNLIAGVPP 438
P ++ NL+ G PP
Sbjct: 437 GPRINGNLVDGAPP 450
>gi|297846532|ref|XP_002891147.1| hypothetical protein ARALYDRAFT_473635 [Arabidopsis lyrata subsp.
lyrata]
gi|297336989|gb|EFH67406.1| hypothetical protein ARALYDRAFT_473635 [Arabidopsis lyrata subsp.
lyrata]
Length = 522
Score = 430 bits (1106), Expect = e-118, Method: Compositional matrix adjust.
Identities = 222/412 (53%), Positives = 281/412 (68%), Gaps = 48/412 (11%)
Query: 74 SSSVLLFLGFGA-RICSAGPTQLPLTPAVNQQDQL------LDQDTEQKEDEKLNQEFEN 126
S+S +LFLG + R+CS +L P V ++++ +++ + EDEKL +FE
Sbjct: 47 SASTVLFLGLSSLRVCSPASARLLPPPIVVTENEINTETVAGEENLIEVEDEKLEADFEA 106
Query: 127 WKWKTYALTVPLRVVSLQNSVPQSWVKDFMRSQGKRLKFQMNLCASIDGIVNNLSTPFNK 186
+K K Y+LTVPL++V+L+ SVP SW+K+FM SQGKR++ + A+++ I +LS P K
Sbjct: 107 YKSKVYSLTVPLKLVALRGSVPPSWIKEFMSSQGKRVRLKTRFRANLEEIFFDLSKPTRK 166
Query: 187 --------------------LSFAIKKRFIEPIAEAEDQDWFKRLSHKWKVYLRSNDAGE 226
L AI+++ IEP+ EDQDW+K LS KWK+YL N AGE
Sbjct: 167 GQKGSASTAAADMISIGDSWLCHAIREKLIEPMKGIEDQDWYKGLSEKWKIYLCRNYAGE 226
Query: 227 IDPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVI- 285
P G+ WA PYRWGTM I YKKSKFQN+ LAPIEDW D W PELAGRI+MVNSPREV+
Sbjct: 227 KAPDGETWAVPYRWGTMVIAYKKSKFQNYKLAPIEDWADLWRPELAGRIAMVNSPREVVG 286
Query: 286 ------------------VAGGKIAVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGW 327
V GG+IAV++NLA L Q+RLFDS +YLKAF +GDVWV VGW
Sbjct: 287 AVLKYMGASYNTTDLDSQVPGGRIAVEKNLASLMKQIRLFDSNNYLKAFNVGDVWVTVGW 346
Query: 328 SSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR--LETKQIGGQVRGPSPLIHQWI 385
SSDV+P KRMSNV V+VPKSGA+LWADLWAIPA S E +QIGG+VRGPSPLI+QWI
Sbjct: 347 SSDVIPVAKRMSNVTVIVPKSGATLWADLWAIPAVSDSGKEAEQIGGRVRGPSPLINQWI 406
Query: 386 EFCLQTARALPFKQEVIPGASPSALESTLVKLPEELLKGKPSVDTNLIAGVP 437
EFCLQ AR+LPF +EVIPGASPSAL+ LV+ PE+ K + +DTNL+ GVP
Sbjct: 407 EFCLQPARSLPFTREVIPGASPSALDGPLVREPEKTKKDRTKLDTNLVTGVP 458
>gi|30692516|ref|NP_174426.2| putrescine-binding periplasmic protein-like protein [Arabidopsis
thaliana]
gi|51536594|gb|AAU05535.1| At1g31410 [Arabidopsis thaliana]
gi|332193231|gb|AEE31352.1| putrescine-binding periplasmic protein-like protein [Arabidopsis
thaliana]
Length = 524
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 220/414 (53%), Positives = 280/414 (67%), Gaps = 49/414 (11%)
Query: 74 SSSVLLFLGFGA-RICSAGPTQLPLTPAVNQQDQLLDQDT-------EQKEDEKLNQEFE 125
S+S +LF+G + R+CS ++ P V ++++ + E +++EKL +FE
Sbjct: 47 SASTVLFIGLSSLRVCSPASARILPPPIVVTENEINTETVAGEENLNEVEDEEKLEADFE 106
Query: 126 NWKWKTYALTVPLRVVSLQNSVPQSWVKDFMRSQGKRLKFQMNLCASIDGIVNNLSTPFN 185
+K K Y+LTVPL++V+L+ SVP SW+K+FM SQGKR++ + +++ I +LS P
Sbjct: 107 AYKSKVYSLTVPLKLVALRGSVPPSWIKEFMSSQGKRVRLKTQFRGNLEEIFFDLSKPSK 166
Query: 186 K--------------------LSFAIKKRFIEPIAEAEDQDWFKRLSHKWKVYLRSNDAG 225
LSFAIK++ IEP+ EDQDW+K LS KWK+YLR N AG
Sbjct: 167 NGKKGAASTAAADMISIGDSWLSFAIKEKLIEPMKGIEDQDWYKGLSDKWKIYLRRNYAG 226
Query: 226 EIDPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVI 285
E P G+ WA PYRWGTM I YKKSKFQN+ LAPIEDW D W PELAGRI+MVNSPREV+
Sbjct: 227 EKAPDGETWAVPYRWGTMVIAYKKSKFQNYKLAPIEDWADLWRPELAGRIAMVNSPREVV 286
Query: 286 -------------------VAGGKIAVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVG 326
V GG++AV++NLA L Q+RLFDS +YLKAF +GDVWV VG
Sbjct: 287 GAVLKYMRASYNTTDLDSQVPGGRLAVEKNLASLMKQIRLFDSNNYLKAFNVGDVWVTVG 346
Query: 327 WSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR--LETKQIGGQVRGPSPLIHQW 384
WSSDV+P KRMSNV V+VPKSGA+LWADLWAIPA S E +Q GG+VRGPSPLI+QW
Sbjct: 347 WSSDVIPVAKRMSNVTVIVPKSGATLWADLWAIPAVSDSGKEAEQRGGRVRGPSPLINQW 406
Query: 385 IEFCLQTARALPFKQEVIPGASPSALESTLVKLPEELLKGKPSVDTNLIAGVPP 438
IEFCLQ AR+LPF +EVIPGASPSAL+ LV PE+ K + +DTNL+ GVPP
Sbjct: 407 IEFCLQPARSLPFTREVIPGASPSALDGPLVTEPEKTKKDRTKLDTNLVTGVPP 460
>gi|28393765|gb|AAO42292.1| unknown protein [Arabidopsis thaliana]
Length = 524
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 220/414 (53%), Positives = 279/414 (67%), Gaps = 49/414 (11%)
Query: 74 SSSVLLFLGFGA-RICSAGPTQLPLTPAVNQQDQLLDQDT-------EQKEDEKLNQEFE 125
S+S +LF+G + R+CS + P V ++++ + E +++EKL +FE
Sbjct: 47 SASTVLFIGLSSLRVCSPASARTLQPPIVVTENEINTETVAGEENLNEVEDEEKLEADFE 106
Query: 126 NWKWKTYALTVPLRVVSLQNSVPQSWVKDFMRSQGKRLKFQMNLCASIDGIVNNLSTPFN 185
+K K Y+LTVPL++V+L+ SVP SW+K+FM SQGKR++ + +++ I +LS P
Sbjct: 107 AYKSKVYSLTVPLKLVALRGSVPPSWIKEFMSSQGKRVRLKTQFRGNLEEIFFDLSKPSK 166
Query: 186 K--------------------LSFAIKKRFIEPIAEAEDQDWFKRLSHKWKVYLRSNDAG 225
LSFAIK++ IEP+ EDQDW+K LS KWK+YLR N AG
Sbjct: 167 NGKKGAASTAAADMISIGDSWLSFAIKEKLIEPMKGIEDQDWYKGLSDKWKIYLRRNYAG 226
Query: 226 EIDPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVI 285
E P G+ WA PYRWGTM I YKKSKFQN+ LAPIEDW D W PELAGRI+MVNSPREV+
Sbjct: 227 EKAPDGETWAVPYRWGTMVIAYKKSKFQNYKLAPIEDWADLWRPELAGRIAMVNSPREVV 286
Query: 286 -------------------VAGGKIAVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVG 326
V GG++AV++NLA L Q+RLFDS +YLKAF +GDVWV VG
Sbjct: 287 GAVLKYMRASYNTTDLDSQVPGGRLAVEENLASLMKQIRLFDSNNYLKAFNVGDVWVTVG 346
Query: 327 WSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR--LETKQIGGQVRGPSPLIHQW 384
WSSDV+P KRMSNV V+VPKSGA+LWADLWAIPA S E +Q GG+VRGPSPLI+QW
Sbjct: 347 WSSDVIPVAKRMSNVTVIVPKSGATLWADLWAIPAVSDSGKEAEQRGGRVRGPSPLINQW 406
Query: 385 IEFCLQTARALPFKQEVIPGASPSALESTLVKLPEELLKGKPSVDTNLIAGVPP 438
IEFCLQ AR+LPF +EVIPGASPSAL+ LV PE+ K + +DTNL+ GVPP
Sbjct: 407 IEFCLQPARSLPFTREVIPGASPSALDGPLVTEPEKTKKDRTKLDTNLVTGVPP 460
>gi|12322546|gb|AAG51275.1|AC027135_16 hypothetical protein [Arabidopsis thaliana]
Length = 526
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 220/416 (52%), Positives = 280/416 (67%), Gaps = 51/416 (12%)
Query: 74 SSSVLLFLGFGA-RICSAGPTQLPLTPAVNQQDQLLDQDT-------EQKEDEKLNQEFE 125
S+S +LF+G + R+CS ++ P V ++++ + E +++EKL +FE
Sbjct: 47 SASTVLFIGLSSLRVCSPASARILPPPIVVTENEINTETVAGEENLNEVEDEEKLEADFE 106
Query: 126 NWKWKTYALTVPLRVVSLQNSVPQSWVKDFMRSQGKRLKFQMNLCASIDGIVNNLSTPFN 185
+K K Y+LTVPL++V+L+ SVP SW+K+FM SQGKR++ + +++ I +LS P
Sbjct: 107 AYKSKVYSLTVPLKLVALRGSVPPSWIKEFMSSQGKRVRLKTQFRGNLEEIFFDLSKPSK 166
Query: 186 K--------------------LSFAIKKRFIEPIAEAEDQDWFKRLSHKWK--VYLRSND 223
LSFAIK++ IEP+ EDQDW+K LS KWK +YLR N
Sbjct: 167 NGKKGAASTAAADMISIGDSWLSFAIKEKLIEPMKGIEDQDWYKGLSDKWKSQIYLRRNY 226
Query: 224 AGEIDPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPRE 283
AGE P G+ WA PYRWGTM I YKKSKFQN+ LAPIEDW D W PELAGRI+MVNSPRE
Sbjct: 227 AGEKAPDGETWAVPYRWGTMVIAYKKSKFQNYKLAPIEDWADLWRPELAGRIAMVNSPRE 286
Query: 284 VI-------------------VAGGKIAVQQNLALLANQVRLFDSTHYLKAFGIGDVWVA 324
V+ V GG++AV++NLA L Q+RLFDS +YLKAF +GDVWV
Sbjct: 287 VVGAVLKYMRASYNTTDLDSQVPGGRLAVEKNLASLMKQIRLFDSNNYLKAFNVGDVWVT 346
Query: 325 VGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR--LETKQIGGQVRGPSPLIH 382
VGWSSDV+P KRMSNV V+VPKSGA+LWADLWAIPA S E +Q GG+VRGPSPLI+
Sbjct: 347 VGWSSDVIPVAKRMSNVTVIVPKSGATLWADLWAIPAVSDSGKEAEQRGGRVRGPSPLIN 406
Query: 383 QWIEFCLQTARALPFKQEVIPGASPSALESTLVKLPEELLKGKPSVDTNLIAGVPP 438
QWIEFCLQ AR+LPF +EVIPGASPSAL+ LV PE+ K + +DTNL+ GVPP
Sbjct: 407 QWIEFCLQPARSLPFTREVIPGASPSALDGPLVTEPEKTKKDRTKLDTNLVTGVPP 462
>gi|226510377|ref|NP_001146059.1| uncharacterized protein LOC100279590 [Zea mays]
gi|219885513|gb|ACL53131.1| unknown [Zea mays]
gi|413919418|gb|AFW59350.1| putative putrescine-binding domain family protein [Zea mays]
Length = 530
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 202/354 (57%), Positives = 248/354 (70%), Gaps = 39/354 (11%)
Query: 124 FENWKWKTYALTVPLRVVSLQNSVPQSWVKDFMRSQGKRLKFQMNLCASIDGIVNNLSTP 183
+ WK KTYAL+VPLRVV+L+ S P SW+KDF+ +QGKRLKF L A++DGI + +S
Sbjct: 124 LQKWKTKTYALSVPLRVVALRGSFPPSWIKDFVEAQGKRLKFSPELRANLDGIFSEMSQC 183
Query: 184 FNK--------------------LSFAIKKRFIEPIAEAEDQDWFKRLSHKWKVYLRSND 223
+K L +AI+K +EPI AE+QDWF LS +WKV+L N
Sbjct: 184 MDKGQVQPKSAMAADVVSLGDSWLGYAIRKGLLEPIKNAEEQDWFHSLSDRWKVHLCRNQ 243
Query: 224 AGEIDPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPRE 283
GE DP G IW PYRWGTM I YKK KF+ HNL PI+DW+D W PELAGRISMV+SPRE
Sbjct: 244 NGEADPNGTIWGVPYRWGTMVIAYKKDKFKRHNLKPIQDWEDLWRPELAGRISMVDSPRE 303
Query: 284 VI-------------------VAGGKIAVQQNLALLANQVRLFDSTHYLKAFGIGDVWVA 324
VI V GG+ AV + L QV+LFDS +YLK+F +GDVWVA
Sbjct: 304 VIGAVLKHLGSSYNTVDMEMDVNGGRAAVLNSFTQLQKQVQLFDSMNYLKSFSVGDVWVA 363
Query: 325 VGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGQVRGPSPLIHQW 384
VGWSSDV+PA KRMSNVAVVVPKSG+SLWADLWAIP A+R +T QIG + RGPSPL+HQW
Sbjct: 364 VGWSSDVIPAAKRMSNVAVVVPKSGSSLWADLWAIPCATRFQTDQIGSRARGPSPLVHQW 423
Query: 385 IEFCLQTARALPFKQEVIPGASPSALESTLVKLPEELLKGKPSVDTNLIAGVPP 438
+FCLQ+AR+LPF+Q+VIPGASP LES + ++P++ K KP +DTNL+ GVPP
Sbjct: 424 FDFCLQSARSLPFRQDVIPGASPLHLESPVPEVPQDKNKRKPKLDTNLVRGVPP 477
>gi|242077052|ref|XP_002448462.1| hypothetical protein SORBIDRAFT_06g027530 [Sorghum bicolor]
gi|241939645|gb|EES12790.1| hypothetical protein SORBIDRAFT_06g027530 [Sorghum bicolor]
Length = 531
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 200/366 (54%), Positives = 256/366 (69%), Gaps = 39/366 (10%)
Query: 112 TEQKEDEKLNQEFENWKWKTYALTVPLRVVSLQNSVPQSWVKDFMRSQGKRLKFQMNLCA 171
T+++ED++ + WK KTYAL+VPLRVV+L+ S P SW+KDF+ QGKRLKF L A
Sbjct: 113 TQEEEDKEWEAALQKWKTKTYALSVPLRVVALRGSFPPSWIKDFVEVQGKRLKFSPELRA 172
Query: 172 SIDGIVNNLSTPFNK--------------------LSFAIKKRFIEPIAEAEDQDWFKRL 211
++DGI + +S +K L +AI++ +EP+ AE+QDWF+ L
Sbjct: 173 NLDGIFSEMSQCMDKGQVQPKSAMAADAVTLGDSWLGYAIRQGLLEPVKNAEEQDWFRSL 232
Query: 212 SHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPEL 271
S +WKV+L N GE DP G IW PYRWGTM I YKK+KF+ HNL PI+DW+D W PEL
Sbjct: 233 SDRWKVHLCRNQNGEADPNGTIWGVPYRWGTMVIAYKKNKFKRHNLKPIQDWEDLWRPEL 292
Query: 272 AGRISMVNSPREVI-------------------VAGGKIAVQQNLALLANQVRLFDSTHY 312
AGRISMV+SPRE+I V GG+ AV + L QV+LFDS Y
Sbjct: 293 AGRISMVDSPREIIGAVLKHLGSSYNTVDMEIDVNGGREAVLNSFTQLQKQVQLFDSMDY 352
Query: 313 LKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGG 372
LK+F +GDVWVAVGWSSDV+PA KRMSNVAVVVPKSG+S+WADLWAIP A+R +T QIG
Sbjct: 353 LKSFSVGDVWVAVGWSSDVIPAAKRMSNVAVVVPKSGSSIWADLWAIPCATRFQTDQIGS 412
Query: 373 QVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALESTLVKLPEELLKGKPSVDTNL 432
+ RGPSPLIHQW +FCLQ+AR+LPF+Q+VIPGASP LE+ + ++P++ K KP ++TNL
Sbjct: 413 RTRGPSPLIHQWFDFCLQSARSLPFRQDVIPGASPLYLENPVPEVPQDKNKRKPKLETNL 472
Query: 433 IAGVPP 438
+ GVPP
Sbjct: 473 VRGVPP 478
>gi|357165613|ref|XP_003580439.1| PREDICTED: uncharacterized protein LOC100830894 [Brachypodium
distachyon]
Length = 526
Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust.
Identities = 196/354 (55%), Positives = 247/354 (69%), Gaps = 39/354 (11%)
Query: 124 FENWKWKTYALTVPLRVVSLQNSVPQSWVKDFMRSQGKRLKFQMNLCASIDGIVNNLSTP 183
+ WK KTYAL+VPLRVV+L+ S P +WVKDF+ +QG RLKF SID + LS
Sbjct: 120 LQQWKSKTYALSVPLRVVALRGSFPPTWVKDFVEAQGNRLKFSPEFRTSIDTLFTELSQC 179
Query: 184 FNK--------------------LSFAIKKRFIEPIAEAEDQDWFKRLSHKWKVYLRSND 223
K L +AI+K +EPI AE+QDW++ LS +WKV+LR N
Sbjct: 180 VEKGEVQSKSAMAADVVSIGDSWLGYAIRKGLVEPIKNAEEQDWYRSLSDRWKVHLRRNQ 239
Query: 224 AGEIDPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPRE 283
GE D G +W APYRWGT+ I YKKSKF+ HNL PI+DW+D W PELAG+ISMV+SPRE
Sbjct: 240 NGEADSNGSVWGAPYRWGTVVIAYKKSKFKQHNLKPIQDWEDLWRPELAGKISMVDSPRE 299
Query: 284 VI-------------------VAGGKIAVQQNLALLANQVRLFDSTHYLKAFGIGDVWVA 324
VI V+GG+ A+ + L QV+LFDS +YLK+FG+GDVWV
Sbjct: 300 VIGAVLKRLGSSYNTIDMETEVSGGREAILNSFVQLQKQVQLFDSMNYLKSFGVGDVWVT 359
Query: 325 VGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGQVRGPSPLIHQW 384
VGWSSDV+PA KRMSNVAVVVPKSG+SLWADLWAIP A+R +T +IGG+ RGPSPLIHQW
Sbjct: 360 VGWSSDVIPAAKRMSNVAVVVPKSGSSLWADLWAIPCATRFQTDRIGGRTRGPSPLIHQW 419
Query: 385 IEFCLQTARALPFKQEVIPGASPSALESTLVKLPEELLKGKPSVDTNLIAGVPP 438
+FCLQ+AR+LPF+QE+IPGASP LE+ ++P+++ K KP ++TNL+ GVPP
Sbjct: 420 FDFCLQSARSLPFRQEIIPGASPLFLENPAPEVPQDVNKRKPKLETNLVRGVPP 473
>gi|38344144|emb|CAE01823.2| OSJNBa0041A02.11 [Oryza sativa Japonica Group]
Length = 422
Score = 396 bits (1018), Expect = e-108, Method: Compositional matrix adjust.
Identities = 191/354 (53%), Positives = 253/354 (71%), Gaps = 39/354 (11%)
Query: 124 FENWKWKTYALTVPLRVVSLQNSVPQSWVKDFMRSQGKRLKFQMNLCASIDGIVNNLSTP 183
+ WK KTY+L+VPLRVV+L+ S P +W+KDF+ +QGKRLKF ++D + + +S
Sbjct: 16 LQQWKSKTYSLSVPLRVVALRGSFPPAWIKDFVEAQGKRLKFSPEFRTNLDVLYSEMSQC 75
Query: 184 FNK--------------------LSFAIKKRFIEPIAEAEDQDWFKRLSHKWKVYLRSND 223
+K L +AI+K +EP+ AE+QDWF+ LS++WK++L N
Sbjct: 76 LDKGQLKQKSAMAADVVSIGDSWLGYAIRKGLVEPVKNAEEQDWFQSLSNRWKIHLCRNR 135
Query: 224 AGEIDPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPRE 283
GE+DP G IWA PYRWGT+ I YKK+KF+ HNL PI+DW D W PELAG+ISMV+SPRE
Sbjct: 136 NGEVDPNGSIWAVPYRWGTVVIAYKKNKFKRHNLKPIQDWGDLWRPELAGKISMVDSPRE 195
Query: 284 VI-------------------VAGGKIAVQQNLALLANQVRLFDSTHYLKAFGIGDVWVA 324
VI + GG+ V ++L L NQV+LFDST+YLK+FG+GDVWVA
Sbjct: 196 VIGAVLKHLGSSYNTNDMESEITGGRETVLESLTQLQNQVQLFDSTNYLKSFGVGDVWVA 255
Query: 325 VGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGQVRGPSPLIHQW 384
VGWSSDV+PA KRMS+VAVVVPKSG+SLWADLWAIP+A++ +T +IGG+ RGPSPLI+QW
Sbjct: 256 VGWSSDVIPAAKRMSDVAVVVPKSGSSLWADLWAIPSATKFQTDRIGGRTRGPSPLINQW 315
Query: 385 IEFCLQTARALPFKQEVIPGASPSALESTLVKLPEELLKGKPSVDTNLIAGVPP 438
+FCLQ+AR+LPF+Q+VIPGASP LE + ++P+E K KP ++TNL+ G PP
Sbjct: 316 FDFCLQSARSLPFRQDVIPGASPLFLEKPVPEVPQERNKRKPKLETNLVRGAPP 369
>gi|218195504|gb|EEC77931.1| hypothetical protein OsI_17268 [Oryza sativa Indica Group]
gi|222629488|gb|EEE61620.1| hypothetical protein OsJ_16044 [Oryza sativa Japonica Group]
Length = 537
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 191/354 (53%), Positives = 253/354 (71%), Gaps = 39/354 (11%)
Query: 124 FENWKWKTYALTVPLRVVSLQNSVPQSWVKDFMRSQGKRLKFQMNLCASIDGIVNNLSTP 183
+ WK KTY+L+VPLRVV+L+ S P +W+KDF+ +QGKRLKF ++D + + +S
Sbjct: 131 LQQWKSKTYSLSVPLRVVALRGSFPPAWIKDFVEAQGKRLKFSPEFRTNLDVLYSEMSQC 190
Query: 184 FNK--------------------LSFAIKKRFIEPIAEAEDQDWFKRLSHKWKVYLRSND 223
+K L +AI+K +EP+ AE+QDWF+ LS++WK++L N
Sbjct: 191 LDKGQLKQKSAMAADVVSIGDSWLGYAIRKGLVEPVKNAEEQDWFQSLSNRWKIHLCRNR 250
Query: 224 AGEIDPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPRE 283
GE+DP G IWA PYRWGT+ I YKK+KF+ HNL PI+DW D W PELAG+ISMV+SPRE
Sbjct: 251 NGEVDPNGSIWAVPYRWGTVVIAYKKNKFKRHNLKPIQDWGDLWRPELAGKISMVDSPRE 310
Query: 284 VI-------------------VAGGKIAVQQNLALLANQVRLFDSTHYLKAFGIGDVWVA 324
VI + GG+ V ++L L NQV+LFDST+YLK+FG+GDVWVA
Sbjct: 311 VIGAVLKHLGSSYNTNDMESEITGGRETVLESLTQLQNQVQLFDSTNYLKSFGVGDVWVA 370
Query: 325 VGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGQVRGPSPLIHQW 384
VGWSSDV+PA KRMS+VAVVVPKSG+SLWADLWAIP+A++ +T +IGG+ RGPSPLI+QW
Sbjct: 371 VGWSSDVIPAAKRMSDVAVVVPKSGSSLWADLWAIPSATKFQTDRIGGRTRGPSPLINQW 430
Query: 385 IEFCLQTARALPFKQEVIPGASPSALESTLVKLPEELLKGKPSVDTNLIAGVPP 438
+FCLQ+AR+LPF+Q+VIPGASP LE + ++P+E K KP ++TNL+ G PP
Sbjct: 431 FDFCLQSARSLPFRQDVIPGASPLFLEKPVPEVPQERNKRKPKLETNLVRGAPP 484
>gi|116310926|emb|CAH67864.1| B0403H10-OSIGBa0105A11.16 [Oryza sativa Indica Group]
Length = 537
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 191/354 (53%), Positives = 253/354 (71%), Gaps = 39/354 (11%)
Query: 124 FENWKWKTYALTVPLRVVSLQNSVPQSWVKDFMRSQGKRLKFQMNLCASIDGIVNNLSTP 183
+ WK KTY+L+VPLRVV+L+ S P +W+KDF+ +QGKRLKF ++D + + +S
Sbjct: 131 LQQWKSKTYSLSVPLRVVALRGSFPPAWIKDFVEAQGKRLKFSPEFRTNLDVLYSEMSQC 190
Query: 184 FNK--------------------LSFAIKKRFIEPIAEAEDQDWFKRLSHKWKVYLRSND 223
+K L +AI+K +EP+ AE+QDWF+ LS++WK++L N
Sbjct: 191 LDKGQLKQKSAMAADVVSIGDSWLGYAIRKGLVEPVKNAEEQDWFQSLSNRWKIHLCRNR 250
Query: 224 AGEIDPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPRE 283
GE+DP G IWA PYRWGT+ I YKK+KF+ HNL PI+DW D W PELAG+ISMV+SPRE
Sbjct: 251 NGEVDPNGSIWAVPYRWGTVVIAYKKNKFKRHNLKPIQDWGDLWRPELAGKISMVDSPRE 310
Query: 284 VI-------------------VAGGKIAVQQNLALLANQVRLFDSTHYLKAFGIGDVWVA 324
VI + GG+ V ++L L NQV+LFDST+YLK+FG+GDVWVA
Sbjct: 311 VIGAVLKHLGSSYNTNDMESEITGGRETVLESLTQLQNQVQLFDSTNYLKSFGVGDVWVA 370
Query: 325 VGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGQVRGPSPLIHQW 384
VGWSSDV+PA KRMS+VAVVVPKSG+SLWADLWAIP+A++ +T +IGG+ RGPSPLI+QW
Sbjct: 371 VGWSSDVIPAAKRMSDVAVVVPKSGSSLWADLWAIPSATKFQTDRIGGRTRGPSPLINQW 430
Query: 385 IEFCLQTARALPFKQEVIPGASPSALESTLVKLPEELLKGKPSVDTNLIAGVPP 438
+FCLQ+AR+LPF+Q+VIPGASP LE + ++P+E K KP ++TNL+ G PP
Sbjct: 431 FDFCLQSARSLPFRQDVIPGASPLFLEKPVPEVPQERNKRKPKLETNLVRGAPP 484
>gi|326516630|dbj|BAJ92470.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518394|dbj|BAJ88226.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326519014|dbj|BAJ92667.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326520335|dbj|BAK07426.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326524998|dbj|BAK04435.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 531
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 193/354 (54%), Positives = 244/354 (68%), Gaps = 39/354 (11%)
Query: 124 FENWKWKTYALTVPLRVVSLQNSVPQSWVKDFMRSQGKRLKFQMNLCASIDGIVNNLSTP 183
WK KTYAL+VPLRVV+L+ S P +W+KDF+ ++GKRLKF SID + + LS
Sbjct: 125 LRQWKSKTYALSVPLRVVALRGSFPPAWIKDFVEAEGKRLKFSPEFRPSIDALFSELSKC 184
Query: 184 FNK--------------------LSFAIKKRFIEPIAEAEDQDWFKRLSHKWKVYLRSND 223
+K L +AI+K +EPI+ AE+QDW++ LS +WKV+L N
Sbjct: 185 VDKGQVQPKSAMAADLVSIGDSWLGYAIRKGLVEPISNAEEQDWYRSLSDRWKVHLCRNQ 244
Query: 224 AGEIDPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPRE 283
GE D G +W PYRWGT+ I YKKSKF+ HNL PI+DW+D W PELAG+ISMV+SPRE
Sbjct: 245 NGEADSSGSVWGVPYRWGTVVIAYKKSKFKQHNLKPIQDWEDLWRPELAGKISMVDSPRE 304
Query: 284 VI-------------------VAGGKIAVQQNLALLANQVRLFDSTHYLKAFGIGDVWVA 324
VI V GG+ AV + L QV+LFDS +YLK+FG+GDVWV
Sbjct: 305 VIGAVLKQLGSSYNTIDMETEVNGGREAVLNSFTQLQKQVQLFDSMNYLKSFGVGDVWVT 364
Query: 325 VGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGQVRGPSPLIHQW 384
VGWSSDV+PA KRMSNVAVVVPKSG+SLWADLWAIP A+R +T +IGG+ RGPSPLIHQW
Sbjct: 365 VGWSSDVIPAAKRMSNVAVVVPKSGSSLWADLWAIPCATRFQTDRIGGRTRGPSPLIHQW 424
Query: 385 IEFCLQTARALPFKQEVIPGASPSALESTLVKLPEELLKGKPSVDTNLIAGVPP 438
+FCLQ+AR+LPF+QE+IPGASP LE +P++ K +P ++TNL+ GVPP
Sbjct: 425 FDFCLQSARSLPFRQEIIPGASPLFLEHPAPDVPQDRNKKQPKLETNLVRGVPP 478
>gi|115460340|ref|NP_001053770.1| Os04g0602200 [Oryza sativa Japonica Group]
gi|113565341|dbj|BAF15684.1| Os04g0602200, partial [Oryza sativa Japonica Group]
Length = 367
Score = 348 bits (893), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 162/271 (59%), Positives = 209/271 (77%), Gaps = 19/271 (7%)
Query: 187 LSFAIKKRFIEPIAEAEDQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIG 246
L +AI+K +EP+ AE+QDWF+ LS++WK++L N GE+DP G IWA PYRWGT+ I
Sbjct: 44 LGYAIRKGLVEPVKNAEEQDWFQSLSNRWKIHLCRNRNGEVDPNGSIWAVPYRWGTVVIA 103
Query: 247 YKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVI-------------------VA 287
YKK+KF+ HNL PI+DW D W PELAG+ISMV+SPREVI +
Sbjct: 104 YKKNKFKRHNLKPIQDWGDLWRPELAGKISMVDSPREVIGAVLKHLGSSYNTNDMESEIT 163
Query: 288 GGKIAVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPK 347
GG+ V ++L L NQV+LFDST+YLK+FG+GDVWVAVGWSSDV+PA KRMS+VAVVVPK
Sbjct: 164 GGRETVLESLTQLQNQVQLFDSTNYLKSFGVGDVWVAVGWSSDVIPAAKRMSDVAVVVPK 223
Query: 348 SGASLWADLWAIPAASRLETKQIGGQVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASP 407
SG+SLWADLWAIP+A++ +T +IGG+ RGPSPLI+QW +FCLQ+AR+LPF+Q+VIPGASP
Sbjct: 224 SGSSLWADLWAIPSATKFQTDRIGGRTRGPSPLINQWFDFCLQSARSLPFRQDVIPGASP 283
Query: 408 SALESTLVKLPEELLKGKPSVDTNLIAGVPP 438
LE + ++P+E K KP ++TNL+ G PP
Sbjct: 284 LFLEKPVPEVPQERNKRKPKLETNLVRGAPP 314
>gi|168015953|ref|XP_001760514.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162688211|gb|EDQ74589.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 438
Score = 308 bits (790), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 161/376 (42%), Positives = 221/376 (58%), Gaps = 53/376 (14%)
Query: 116 EDEKLNQEFENWKWKTYALTVPLRVVSLQNSVPQSWVKDFMRSQGKRLKFQMNLCASIDG 175
EDE+L + FE WK K YALTVPLR+V L+ SVP +W+K+F+ SQGK K S+
Sbjct: 3 EDEELKKAFEEWKAKPYALTVPLRIVGLRGSVPPAWLKEFLMSQGKNAKLSAEFKGSLSD 62
Query: 176 IVNNLSTPFNK--------------------LSFAIKKRFIEPIAEAEDQDWFKRLSHKW 215
I+ L+ L+ A++ ++PI AE DWF RL KW
Sbjct: 63 ILAELAVSMENSQITPKSAMAADLVTVGDSWLATAVQGGLLDPIRNAEQFDWFNRLHPKW 122
Query: 216 KVYLRSNDAGEIDPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRI 275
+ ++R + G I+P+G +W PYRWG++ +KK K + + ++PI DWKD + P+LAGRI
Sbjct: 123 QNFIRRDPEGIINPQGLVWGVPYRWGSLVFAFKKDKLERNGISPIRDWKDLFQPQLAGRI 182
Query: 276 SMVNSPREVI-------------------VAGGKIAVQQNLALLANQVRLFDSTHYLKAF 316
+MV+SPREV+ V GG+ AV++ L QVRLFD YLKA
Sbjct: 183 AMVDSPREVVGAVLKSLGASYNTNDFDADVPGGREAVKERFLALQKQVRLFDDNDYLKAM 242
Query: 317 GIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLE-TKQIGGQVR 375
GDVWVAVGWSSD++P KR SN++V P+SG SLWADLWAIPA + E + +GG+VR
Sbjct: 243 SAGDVWVAVGWSSDIIPYSKRASNISVYAPESGTSLWADLWAIPATTTFEKAENVGGRVR 302
Query: 376 GPSPLIHQWIEFCLQTARALPFKQEVIPGASP---------SALESTLVKLPEELLKGKP 426
GPSPL+ QW++FCLQ ARA F +V GASP E+T ++ KP
Sbjct: 303 GPSPLVFQWLDFCLQPARATTFANDVFVGASPLTWSEKSETEISENTFLETGASQSGKKP 362
Query: 427 ----SVDTNLIAGVPP 438
++D+N++ G+PP
Sbjct: 363 KTVVTLDSNIVQGMPP 378
>gi|302820071|ref|XP_002991704.1| hypothetical protein SELMODRAFT_133925 [Selaginella moellendorffii]
gi|300140553|gb|EFJ07275.1| hypothetical protein SELMODRAFT_133925 [Selaginella moellendorffii]
Length = 387
Score = 295 bits (756), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 152/361 (42%), Positives = 208/361 (57%), Gaps = 42/361 (11%)
Query: 118 EKLNQEFENWKWKTYALTVPLRVVSLQNSVPQSWVKDFMRSQGKRLKFQMNLCASIDGIV 177
E++ + +E WK Y+++ PLR+V L+ SVP W+KDFM SQGK++K S+D I
Sbjct: 3 EEMRRAYEQWKTVPYSISFPLRIVGLRGSVPPVWIKDFMVSQGKQMKLGAEFLGSLDTIY 62
Query: 178 NNLSTPFNK--------------------LSFAIKKRFIEPIAEAEDQDWFKRLSHKWKV 217
L + N L AI+ + I + + ++ +WF+ L KW+
Sbjct: 63 TQLVSAKNSGQLTSKSTMAADVVTLGDSWLGVAIRNKLIASVGKPQELEWFQHLDPKWQA 122
Query: 218 YLRSNDAGEIDPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISM 277
LR + G D G++W APYR G M I Y+K K L I+DW D W PELAGRISM
Sbjct: 123 ILRRDAQGRPDETGQVWGAPYRCGCMVIAYRKDKLAKAGLQDIKDWDDLWKPELAGRISM 182
Query: 278 VNSPREVI-------------------VAGGKIAVQQNLALLANQVRLFDSTHYLKAFGI 318
+ S REV+ V GG+ AV++ L Q +FD+ +YL+A G
Sbjct: 183 IESTREVVGLVLKSLGASYNARNLDAEVHGGQEAVKERFLRLRKQA-MFDNINYLRALGA 241
Query: 319 GDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGQVRGPS 378
GDVW+AVGWS+DVLP KR SNV V+ P SG SLWAD+WAIPAA ++++ + GG++RGPS
Sbjct: 242 GDVWIAVGWSNDVLPFAKRQSNVGVIAPASGTSLWADVWAIPAAIKIKSDKAGGRIRGPS 301
Query: 379 PLIHQWIEFCLQTARALPFKQEVIPGASPSALESTLVKLPEELLKGKPSVDTNLIAGVPP 438
PL+ QW+EFCLQ AR+L F QE GASP E P +DTNL++G+PP
Sbjct: 302 PLVSQWLEFCLQPARSLAFHQEAFCGASPLRFADVADNGSSE--PAGPRLDTNLVSGLPP 359
Query: 439 R 439
+
Sbjct: 360 K 360
>gi|302818713|ref|XP_002991029.1| hypothetical protein SELMODRAFT_132900 [Selaginella moellendorffii]
gi|300141123|gb|EFJ07837.1| hypothetical protein SELMODRAFT_132900 [Selaginella moellendorffii]
Length = 387
Score = 293 bits (749), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 150/361 (41%), Positives = 208/361 (57%), Gaps = 42/361 (11%)
Query: 118 EKLNQEFENWKWKTYALTVPLRVVSLQNSVPQSWVKDFMRSQGKRLKFQMNLCASIDGIV 177
E++ + +E WK Y+++ PLR+V L+ SVP W+KDFM SQGK++K S+D I
Sbjct: 3 EEMQRAYEQWKTVPYSISFPLRIVGLRGSVPPVWIKDFMVSQGKQMKLGAEFLGSLDTIY 62
Query: 178 NNLSTPFNK--------------------LSFAIKKRFIEPIAEAEDQDWFKRLSHKWKV 217
L + N L AI+ + I + + ++ +WF+ L KW+
Sbjct: 63 TQLVSAKNSGQLTSKSTMAADVVTLGDSWLGAAIRNKLIASVGKPQELEWFQHLDPKWQA 122
Query: 218 YLRSNDAGEIDPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISM 277
LR + G D G++W APYR G M I Y+K K L I+DW D W PELAG+ISM
Sbjct: 123 ILRRDAQGRPDETGQVWGAPYRCGCMVIAYRKDKLAKAGLQDIKDWDDLWKPELAGKISM 182
Query: 278 VNSPREVI-------------------VAGGKIAVQQNLALLANQVRLFDSTHYLKAFGI 318
+ S REV+ V GG+ AV++ L Q +F++ +YL+A G
Sbjct: 183 IESTREVVGLVLKSLGASYNARNLDAEVHGGQEAVKERFLRLRKQA-MFENINYLRALGA 241
Query: 319 GDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGQVRGPS 378
GDVW+AVGWS+DVLP KR SNV V+ P SG SLWAD+WAIPAA+ +++ + GG++RGPS
Sbjct: 242 GDVWIAVGWSNDVLPFAKRQSNVGVIAPASGTSLWADVWAIPAATTIKSDKAGGRIRGPS 301
Query: 379 PLIHQWIEFCLQTARALPFKQEVIPGASPSALESTLVKLPEELLKGKPSVDTNLIAGVPP 438
PL+ QW+EFCLQ AR+L F QE GASP E P +DTNL++G+PP
Sbjct: 302 PLVSQWLEFCLQPARSLAFHQEAFCGASPLRFADVADNGSSE--PAGPRLDTNLVSGLPP 359
Query: 439 R 439
+
Sbjct: 360 K 360
>gi|384250495|gb|EIE23974.1| periplasmic binding protein-like II, partial [Coccomyxa
subellipsoidea C-169]
Length = 310
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 109/315 (34%), Positives = 160/315 (50%), Gaps = 45/315 (14%)
Query: 132 YALTVPLRVVSLQNSVPQSWVKDFMRSQGKRLKFQMNLCASIDGIVNNLSTPFNK----- 186
Y L + L++V+L+ SVP + +F + K +FQ+ I I L P +
Sbjct: 1 YELEIALKIVALRGSVPSDAILEFRHALSKYGRFQLAQKPQIADIFEELGQPRSISLNSA 60
Query: 187 ------------LSFAIKKRFIEPIAEAEDQDWFKRLSHKWKVYLRSNDAGEIDPRGKIW 234
L AI+ I+PI EAE W+ L +W+ ++ G +DP+G +W
Sbjct: 61 ARADAVTLGDVWLGPAIRAGLIQPIPEAESNRWWGNLPPRWRELVKRGADGSVDPKGLVW 120
Query: 235 AAPYRWGTMAIGYKKSKFQNHNLA--PIEDWKDPWWPELAGRISMVNSPREVIVA----- 287
A P+RWG I Y+KS PI DW D P L R++ V+SPRE + A
Sbjct: 121 ACPHRWGCTLIAYRKSARARSAAGAHPIRDWGDLLQPCLRQRVAWVDSPREFVGAALKTL 180
Query: 288 GGKIA---------------VQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVL 332
GG + Q + L QVR+F S ++KA G DVW VGWS D++
Sbjct: 181 GGGFNTGAAELASLGLSDQDLAQQVDRLRQQVRVFSSKEHIKALGAKDVWAVVGWSGDLV 240
Query: 333 PAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGQVRGPSPLIHQWIEFCLQTA 392
PA +R +V +V P SG SLWAD+WA+P+ + Q G ++RGPSPL+ W+++ LQ +
Sbjct: 241 PAAERSGDVVLVAPASGTSLWADMWAVPSHA-----QHGSRMRGPSPLLPAWLDYWLQPS 295
Query: 393 RALPFKQEVIPGASP 407
RA + + + GASP
Sbjct: 296 RA-AWNRGLKSGASP 309
>gi|434391078|ref|YP_007126025.1| periplasmic polyamine-binding protein of ABC transporter
[Gloeocapsa sp. PCC 7428]
gi|428262919|gb|AFZ28865.1| periplasmic polyamine-binding protein of ABC transporter
[Gloeocapsa sp. PCC 7428]
Length = 378
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 94/218 (43%), Positives = 126/218 (57%), Gaps = 28/218 (12%)
Query: 187 LSFAIKKRFIEPIAEAEDQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIG 246
LS AI+++ I+P+ + Q+W L +W+ +R N+ GE DP+G+IWAAPYRWG+ I
Sbjct: 108 LSTAIQQQLIQPLNITQLQNW-NALPSRWQELVRRNNQGESDPQGQIWAAPYRWGSTVIL 166
Query: 247 YKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVIVAG----GKIAVQQNLALLAN 302
Y + KF + P DW D W PEL RIS+V+ REVI G+ QNL + N
Sbjct: 167 YNREKFNSLGWTP-NDWSDLWRPELRSRISIVDQSREVIGLTLKRLGQSYNAQNLDQIPN 225
Query: 303 ----------QVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASL 352
QVRL+ S Y++ IGD WVAVGWS+DVLP ++R +AVVVP+SG +L
Sbjct: 226 LEEQLQALHQQVRLYSSNRYIEPLIIGDTWVAVGWSTDVLPILRRYREIAVVVPRSGTAL 285
Query: 353 WADLWAIPAASRLETKQIGGQVRGPSPLIHQWIEFCLQ 390
WAD+W P + L T L QWI+FC Q
Sbjct: 286 WADVWVNPINAALPT------------LASQWIDFCWQ 311
>gi|209522903|ref|ZP_03271460.1| extracellular solute-binding protein family 1 [Arthrospira maxima
CS-328]
gi|376001837|ref|ZP_09779691.1| polyamine transporter subunit ; periplasmic-binding component of
ABC superfamily [Arthrospira sp. PCC 8005]
gi|423062300|ref|ZP_17051090.1| extracellular solute-binding protein family 1 [Arthrospira
platensis C1]
gi|209496490|gb|EDZ96788.1| extracellular solute-binding protein family 1 [Arthrospira maxima
CS-328]
gi|375329748|emb|CCE15444.1| polyamine transporter subunit ; periplasmic-binding component of
ABC superfamily [Arthrospira sp. PCC 8005]
gi|406716208|gb|EKD11359.1| extracellular solute-binding protein family 1 [Arthrospira
platensis C1]
Length = 371
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 109/313 (34%), Positives = 156/313 (49%), Gaps = 43/313 (13%)
Query: 138 LRVVSLQNSVPQSWVKDFMRSQGKRLKFQMNLCASIDGIVNNL-----STPFNK------ 186
RV L SVP V F R Q +R +++ + L S P +
Sbjct: 30 FRVELLNGSVPVQLVNRFRRQQPQRPGLSFVPKFNLEDLYQELQAEATSNPADLVMIGDY 89
Query: 187 -LSFAIKKRFIEPIAEAEDQDWFKRLSHKWKVYLRSNDAGEID--PRGKIWAAPYRWGTM 243
LS AI++ IEP+ ED +++L W+ +R N GE+ P G+IW APYRWGT
Sbjct: 90 WLSAAIREELIEPL-NPEDLSQWQQLPENWQNLVRRNPNGELSNSPEGQIWGAPYRWGTT 148
Query: 244 AIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVI-VAGGKIAVQQN------ 296
AI Y+ +F+ P DW+D W E GRIS+++ REVI + K+ N
Sbjct: 149 AIAYRVDRFEKLGWTPT-DWQDLWRSECQGRISLLDQAREVIGLTLKKLGYSYNTPDLDL 207
Query: 297 -------LALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSG 349
L L VRL+DS +YLK +GD W+AVGWS D+ P V+R N+A+ +PKSG
Sbjct: 208 VPDLKAELEQLHQNVRLYDSNNYLKPLILGDTWLAVGWSGDISPQVQRQHNIAIAIPKSG 267
Query: 350 ASLWADLWAIPAASRLETKQIGGQVRGPSPLIHQWIEFCLQTARALPFKQEVIPGA-SPS 408
+LW+D+W P A+ +PL+ WI+FC Q A + ++ GA SP
Sbjct: 268 TALWSDVWVKPIATSATN----------NPLVQAWIDFCWQPEIAT--QMSLLTGATSPI 315
Query: 409 ALESTLVKLPEEL 421
+ LP++L
Sbjct: 316 VWGMSRADLPKDL 328
>gi|145355770|ref|XP_001422123.1| ABC(binding protein) family transporter: polyamine [Ostreococcus
lucimarinus CCE9901]
gi|144582363|gb|ABP00440.1| ABC(binding protein) family transporter: polyamine [Ostreococcus
lucimarinus CCE9901]
Length = 388
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 97/299 (32%), Positives = 142/299 (47%), Gaps = 36/299 (12%)
Query: 124 FENWKWKTYALTVPLRVVSLQNSVPQSWVKDFMRSQGKRLKFQMNLCASIDGIVNNLSTP 183
+E YA LRV +L+ S P + +F R+Q R+KF+M AS+ I +L+
Sbjct: 16 YEGRTRPAYAFDAALRVATLRRSAPPNAANEFSRTQTNRVKFKMTAVASVGEIYGSLARG 75
Query: 184 FNK-------------LSFAIKKRFIEPIAEAEDQDWFKRLSHKWKVYLRSN-DAGEIDP 229
K L+ AI I PI AE WF RLS W+ +R + G +
Sbjct: 76 GKKTRGADATTLGDEWLAPAIANGLIRPIPGAESSAWFARLSPVWRTLVRRDARTGRVSA 135
Query: 230 RGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVI---- 285
G+I+ APY +G I Y+K K + P DW+D + P L G I M N+PR V+
Sbjct: 136 GGEIYGAPYGFGCAVIAYRKDKLP-KGVKPPRDWEDLFDPRLKGLIGMPNAPRLVLSAAL 194
Query: 286 -----------VAGGKIAVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPA 334
+ G V + L V++FD Y +A GD V +G S DV
Sbjct: 195 KAEGMSANASDIGGADGRVSARVRALRENVKVFDDLQYTQAIACGDCAVVIGPSEDVFSV 254
Query: 335 VKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGQVRGPSPLIHQWIEFCLQTAR 393
+R + + + VP SG +LW+D W +P A+ + + GPSP++ QWI++ LQ AR
Sbjct: 255 ARRSTLIGLAVPSSGTTLWSDCWVVPTAT------VANKGGGPSPVLEQWIDYTLQPAR 307
>gi|113476419|ref|YP_722480.1| periplasmic polyamine-binding protein of ABC transporter
[Trichodesmium erythraeum IMS101]
gi|110167467|gb|ABG52007.1| periplasmic polyamine-binding protein of ABC transporter
[Trichodesmium erythraeum IMS101]
Length = 382
Score = 161 bits (407), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 97/262 (37%), Positives = 142/262 (54%), Gaps = 39/262 (14%)
Query: 187 LSFAIKKRFIEPIAEAEDQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIG 246
L+ AIK+ I+P +W +L KW ++ N+ G +DP+GKIWAAPY+WGT I
Sbjct: 105 LANAIKQELIQPFNSQSLANW-NKLPEKWLELVKRNNQGYVDPQGKIWAAPYQWGTTLIA 163
Query: 247 YKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVI-VAGGKIAVQQN--------- 296
Y+ KF+ P +DW D W PEL G IS++N REVI + K+ N
Sbjct: 164 YRVDKFKALGWEP-KDWSDLWRPELKGNISLLNQAREVIGLTLKKLGKSYNTKNIDQVEK 222
Query: 297 ----LALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASL 352
L L QV+ + S +YL+ IGD W+AVGWS+D+LP +K+ +A VVP+SG +L
Sbjct: 223 LKAELVKLNQQVKFYSSNNYLQPLIIGDTWLAVGWSNDILPLLKKRKKIAAVVPQSGTAL 282
Query: 353 WADLWAIPAASRLETKQIGGQVRGPSPLIHQWIEFCL--QTARALPFKQE----VIPGAS 406
WA+LW PAAS + L +WI FC Q A+ + + ++P +
Sbjct: 283 WANLWVKPAAS------------PENSLTEKWINFCWQPQVAQQMSIITQTSSPIMPKIN 330
Query: 407 PSALEST-----LVKLPEELLK 423
P+ L S L+ LP+E+++
Sbjct: 331 PNELISDIKNNPLLLLPQEIIE 352
>gi|427734714|ref|YP_007054258.1| spermidine/putrescine-binding periplasmic protein [Rivularia sp.
PCC 7116]
gi|427369755|gb|AFY53711.1| spermidine/putrescine-binding periplasmic protein [Rivularia sp.
PCC 7116]
Length = 388
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 93/257 (36%), Positives = 139/257 (54%), Gaps = 33/257 (12%)
Query: 187 LSFAIKKRFIEPIAEAEDQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIG 246
L AI+K I+ ++ + Q+W LS KW+ + N+ G +D +G+IWAAPYRWG+ I
Sbjct: 112 LQEAIEKELIQSLSREDLQNW-SNLSPKWQDLVTRNNQGLVDKQGQIWAAPYRWGSTVII 170
Query: 247 YKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVIVAGGKI--------------A 292
Y+K K + + IEDW D W EL GRIS++N PREVI K +
Sbjct: 171 YRKDKLKKFDWK-IEDWSDLWREELKGRISLLNQPREVIGLTLKKLGKSYNSENLQSIKS 229
Query: 293 VQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASL 352
+++ L +L QV+ ++ST+Y++ +GD W+AVGWS+D++ V R + VVVP SG +L
Sbjct: 230 LKEELQVLNQQVKFYNSTNYIEPLILGDTWLAVGWSNDIVSLVSRYPQLGVVVPNSGTAL 289
Query: 353 WADLWAIPAASRLETKQIGGQVRGPSPLIHQWIEFCL--QTARAL--------PFKQEVI 402
WADLW P + G + L ++WI+FC Q A+ + P E+
Sbjct: 290 WADLWVQPKVT-------GKKDETQESLSNKWIDFCWKPQIAKQIAVLTKANSPIDTEIP 342
Query: 403 PGASPSALESTLVKLPE 419
P L++ L PE
Sbjct: 343 ASEIPKPLQNLLSANPE 359
>gi|334121096|ref|ZP_08495171.1| extracellular solute-binding protein family 1 [Microcoleus
vaginatus FGP-2]
gi|333455585|gb|EGK84231.1| extracellular solute-binding protein family 1 [Microcoleus
vaginatus FGP-2]
Length = 369
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 105/312 (33%), Positives = 157/312 (50%), Gaps = 45/312 (14%)
Query: 138 LRVVSLQNSVPQSWVKDFMRSQGKRLKFQMNLCASIDGIVNNLS----TPFNK------- 186
L++ SL+N +P V F R Q+ + + L P +K
Sbjct: 28 LKIRSLKNGIPAQLVSKFSRDVQPSPLLQVTQEGQLKELFALLQEWKQVPQSKNQANLVM 87
Query: 187 -----LSFAIKKRFIEPIAEAEDQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWG 241
L+ AI+++ I+PI A+ +W +L +W+ +R ND G++DP+GK+WAAPYRWG
Sbjct: 88 LGDYWLTLAIRQKLIKPIDPAKFANW-PQLPERWQKLVRRNDEGKLDPQGKVWAAPYRWG 146
Query: 242 TMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVI-VAGGKIA-------- 292
+ I Y+ KF+ P DWKD W EL RIS+ +S REVI + K+
Sbjct: 147 STVIAYRTDKFKALGWTPT-DWKDLWRSELRDRISLPDSAREVIGLTLKKLGKSYNTQQL 205
Query: 293 -----VQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPK 347
V++ L L QV+L+ S YL+ +GD W+AVG S D+LP ++ ++A+V+P
Sbjct: 206 DQVPNVKKELENLHQQVKLYSSDAYLQPLILGDTWLAVGSSGDLLPLLQTQKDIALVIPV 265
Query: 348 SGASLWADLWAIPAASRLETKQIGGQVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASP 407
SG +LW DLW PA+ P L+ +WI+FCLQ R P + +SP
Sbjct: 266 SGTALWTDLWVEPASG------------NPVSLVEEWIDFCLQ-PRVAPQLSLLAKASSP 312
Query: 408 SALESTLVKLPE 419
+ LPE
Sbjct: 313 IIIGMKPEDLPE 324
>gi|428207943|ref|YP_007092296.1| extracellular solute-binding protein [Chroococcidiopsis thermalis
PCC 7203]
gi|428009864|gb|AFY88427.1| extracellular solute-binding protein family 1 [Chroococcidiopsis
thermalis PCC 7203]
Length = 398
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 87/218 (39%), Positives = 122/218 (55%), Gaps = 27/218 (12%)
Query: 187 LSFAIKKRFIEPIAEAEDQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIG 246
L+ AI++ I+P+ + W +L ++W+ +R N AG+ D +G +WAAPYRWG I
Sbjct: 115 LAAAIRQNLIQPLDPTQLSQW-SQLPNRWQELVRRNQAGQFDAKGDVWAAPYRWGYTVIA 173
Query: 247 YKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVIVAG----GKIAVQQN------ 296
Y + KFQ+ N P +DW D W EL RIS+ N PREVI GK +N
Sbjct: 174 YNRDKFQSLNWKP-QDWGDLWREELRDRISLPNHPREVIGLTLKYLGKSYNTENPSQVPD 232
Query: 297 ----LALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASL 352
L L QV+L+ S YL+ +GD W+AVGWS+D++P ++R +A ++P+SG SL
Sbjct: 233 LTVQLNRLQPQVKLYSSDTYLQPLILGDTWLAVGWSNDIIPVMQRHRQIAAIIPQSGTSL 292
Query: 353 WADLWAIPAASRLETKQIGGQVRGPSPLIHQWIEFCLQ 390
WADLWA P Q L +QWI+FC Q
Sbjct: 293 WADLWANPI-----------QANSDRALEYQWIDFCWQ 319
>gi|428317919|ref|YP_007115801.1| extracellular solute-binding protein family 1 [Oscillatoria
nigro-viridis PCC 7112]
gi|428241599|gb|AFZ07385.1| extracellular solute-binding protein family 1 [Oscillatoria
nigro-viridis PCC 7112]
Length = 369
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 87/218 (39%), Positives = 124/218 (56%), Gaps = 28/218 (12%)
Query: 187 LSFAIKKRFIEPIAEAEDQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIG 246
L+ AI+++ I+PI A+ +W +L +W+ +R ND G++DP+GK+WAAPYRWG+ I
Sbjct: 93 LTLAIRQKLIQPIDPAKFANW-SQLPERWQKLVRRNDEGKLDPQGKVWAAPYRWGSTVIA 151
Query: 247 YKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVI-----VAGGKIAVQQ------ 295
Y+ KF+ P DWKD W EL RIS+ +S REVI G QQ
Sbjct: 152 YRTDKFKALGWTPT-DWKDLWRSELRDRISLPDSAREVIGLTLKKLGKSYNTQQLDRVPN 210
Query: 296 ---NLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASL 352
LA L QV+ + S YL+ +GD W+AVG S D+LP ++ ++A+V+P SG +L
Sbjct: 211 LKKELANLHRQVKFYSSDAYLQPLILGDTWLAVGSSGDLLPLLQTQKDIALVIPVSGTAL 270
Query: 353 WADLWAIPAASRLETKQIGGQVRGPSPLIHQWIEFCLQ 390
W DLW PA+ P L+ +WI+FCLQ
Sbjct: 271 WTDLWVEPASG------------NPVSLVDKWIDFCLQ 296
>gi|254413480|ref|ZP_05027250.1| hypothetical protein MC7420_6059 [Coleofasciculus chthonoplastes
PCC 7420]
gi|196179587|gb|EDX74581.1| hypothetical protein MC7420_6059 [Coleofasciculus chthonoplastes
PCC 7420]
Length = 397
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 106/341 (31%), Positives = 160/341 (46%), Gaps = 60/341 (17%)
Query: 135 TVPLRVVSLQNSVPQSWVKDFMRSQGKRLKFQMNLCASIDGIVNNL-----------STP 183
+ L V LQNS+P + +F R+ ++ + + A + I NL S+P
Sbjct: 27 STALNVGLLQNSIPVQLLAEFRRTLESPVRLKFDPQAQLKDIYQNLRVWKRQSENPESSP 86
Query: 184 FNKLSF---------------------AIKKRFIEPIAEAEDQDWFKRLSHKWKVYLRSN 222
L AI ++ I+P+ + W ++L +W+ +R N
Sbjct: 87 GFSLPLISRKPPAIANLVTLGDYWLESAIGEQLIQPLELSTLPGW-QQLPPRWQGIVRRN 145
Query: 223 DAGEIDPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPR 282
G++D G IW APYRWGT+ I Y++ KF+ P DW D W PEL RIS+++SPR
Sbjct: 146 RQGQLDESGLIWGAPYRWGTVVIAYRRDKFEELGWTPT-DWSDLWRPELRDRISLLDSPR 204
Query: 283 EVI-VAGGKIAVQQNLALLAN-------------QVRLFDSTHYLKAFGIGDVWVAVGWS 328
EVI + K+ + A L+ QV+L+ S HYL+ +GD W+AVGWS
Sbjct: 205 EVIGLTLKKLGFSYDTANLSQVPNLKTELLDLHKQVKLYSSDHYLEPLVLGDTWLAVGWS 264
Query: 329 SDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGQVRGPSPLIHQWIEFC 388
+D+L R + V+P+SG SLWAD+W PA + T + L QWI+FC
Sbjct: 265 TDILSLRGRDRQIQAVIPRSGTSLWADVWVQPAVQK--TAAESPEPETSQSLTQQWIDFC 322
Query: 389 LQTARAL----------PFKQEVIPGASPSALESTLVKLPE 419
+ A+ P + P P +L + + LPE
Sbjct: 323 WRQQSAIDISLLSHAASPILVTMNPATLPDSLRQSEILLPE 363
>gi|354567783|ref|ZP_08986951.1| extracellular solute-binding protein family 1 [Fischerella sp.
JSC-11]
gi|353542241|gb|EHC11705.1| extracellular solute-binding protein family 1 [Fischerella sp.
JSC-11]
Length = 382
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 95/257 (36%), Positives = 134/257 (52%), Gaps = 29/257 (11%)
Query: 149 QSWVKDFMRSQGKRLKFQMNLCASIDGIVNNLSTPFNK-LSFAIKKRFIEPIAEAEDQDW 207
QSW + K L+F + +S + +L T + L +I+K+ I+P+ + + W
Sbjct: 73 QSWYNQPQANHQKGLRFNLPFGSSQKPNIADLVTLGDYWLKTSIEKKLIQPLEVEQLKQW 132
Query: 208 FKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPW 267
L +W+ + N+ G +D +GK+WAAPYRWG+ I Y++ KFQ P DW D W
Sbjct: 133 -AVLPQRWRELVTRNEQGFLDTQGKVWAAPYRWGSTVIVYRRDKFQQLGWTPT-DWSDLW 190
Query: 268 WPELAGRISMVNSPREVI-VAGGKIAVQQN-------------LALLANQVRLFDSTHYL 313
EL RIS++N PREVI + K+ N L L QV+ +DST YL
Sbjct: 191 RTELRDRISLLNHPREVIGLVLKKLGKSYNTENLDAIPGLEAELRALNQQVKFYDSTRYL 250
Query: 314 KAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGQ 373
+ IGD W+AVGWS DVLP V R +AVV P SG +LWAD+W P
Sbjct: 251 EPLIIGDTWLAVGWSDDVLPVVTRYPQLAVVTPLSGTALWADVWVKPMGI---------- 300
Query: 374 VRGPSPLIHQWIEFCLQ 390
+ L ++WI+FC Q
Sbjct: 301 --NQANLAYKWIDFCWQ 315
>gi|434397206|ref|YP_007131210.1| extracellular solute-binding protein family 1 [Stanieria
cyanosphaera PCC 7437]
gi|428268303|gb|AFZ34244.1| extracellular solute-binding protein family 1 [Stanieria
cyanosphaera PCC 7437]
Length = 383
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 94/252 (37%), Positives = 139/252 (55%), Gaps = 32/252 (12%)
Query: 187 LSFAIKKRFIEPIAEAEDQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIG 246
L+ AI+K+ I+P+ + W K L +W+ ++ + G++ G+IW APYRWG I
Sbjct: 109 LTTAIQKQLIQPLDLTQLTAW-KSLDSRWQNLVKRDRNGQLAENGQIWGAPYRWGNTIIV 167
Query: 247 YKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVI-VAGGKIAVQQN--------- 296
Y++ KF++ + P +DW+D W +L RIS+V+ PREVI + K+ N
Sbjct: 168 YRRDKFKDLDWQP-KDWQDLWHQDLRDRISIVDQPREVIGLTLKKLGYSYNTNDLNKIPN 226
Query: 297 ----LALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASL 352
LA L Q++ + S HYL+ IGD W+AVGWS+D+LP KR SN+ VVP+SG S+
Sbjct: 227 LSSELAALHQQIKFYSSDHYLEPLIIGDTWLAVGWSTDILPLSKRYSNLGFVVPQSGTSI 286
Query: 353 WADLWAIPAASRLETKQIGGQVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALES 412
WADLW P RL G + QWI FC R L Q + + S + +
Sbjct: 287 WADLWVQP---RLAESNFGE--------LSQWINFCW---RPLAANQISLFTNAISPVTN 332
Query: 413 TL--VKLPEELL 422
T+ +LP++LL
Sbjct: 333 TMKPTELPQDLL 344
>gi|75909270|ref|YP_323566.1| periplasmic polyamine-binding protein of ABC transporter [Anabaena
variabilis ATCC 29413]
gi|75702995|gb|ABA22671.1| periplasmic polyamine-binding protein of ABC transporter [Anabaena
variabilis ATCC 29413]
Length = 388
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 89/218 (40%), Positives = 124/218 (56%), Gaps = 28/218 (12%)
Query: 187 LSFAIKKRFIEPIAEAEDQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIG 246
L+ AI+++ I+PI A+ + W L +W+ + N+ G DP+GK+WAAPYRWG+ I
Sbjct: 118 LTTAIERKLIQPIETAQLKQW-SGLDSRWRELVTRNEQGIPDPQGKVWAAPYRWGSTVIV 176
Query: 247 YKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVI----VAGGKIAVQQNLAL--- 299
Y + KF+ P +DW D W EL RIS+++ PREVI GK +NLA
Sbjct: 177 YDREKFKKLGWTP-QDWSDLWRNELRSRISLLDQPREVIGLVLKKLGKSYNIENLATVPD 235
Query: 300 -------LANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASL 352
L QV+ + S YL+ IGD W+AVGWSSDV+P + R +++V+P+SG S+
Sbjct: 236 LEKELQTLNQQVKFYSSNTYLEPLIIGDTWLAVGWSSDVIPVLARYPQLSLVIPRSGTSI 295
Query: 353 WADLWAIPAASRLETKQIGGQVRGPSPLIHQWIEFCLQ 390
WADLW P K+I L QWI+FCLQ
Sbjct: 296 WADLWVSP-------KEITQDA-----LSSQWIDFCLQ 321
>gi|443657684|ref|ZP_21131934.1| tat (twin-arginine translocation) pathway signal sequence domain
protein [Microcystis aeruginosa DIANCHI905]
gi|159027984|emb|CAO87944.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
gi|443333157|gb|ELS47731.1| tat (twin-arginine translocation) pathway signal sequence domain
protein [Microcystis aeruginosa DIANCHI905]
Length = 382
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 87/249 (34%), Positives = 129/249 (51%), Gaps = 29/249 (11%)
Query: 187 LSFAIKKRFIEPIAEAEDQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIG 246
L AI I+P+ ++ +W K L +W+ + N G++ GK+W APYRWG I
Sbjct: 109 LGKAISNGLIQPLDTSQLSNWSK-LPPRWQENMTRNAQGQLQTEGKVWGAPYRWGMTVIA 167
Query: 247 YKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVIVAGGK--------------IA 292
Y + KF + P +DW D W PEL G+I+++++ REVI K
Sbjct: 168 YNEEKFAQFDWRP-QDWSDLWRPELTGKIALIDNRREVIGLTLKKLGYSYNASDLKQVTG 226
Query: 293 VQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASL 352
++ L L QVR + S +YL+ +GDVW++VGWS+D+LP R + + VVVPKSG SL
Sbjct: 227 LKDQLFALQKQVRFYSSQYYLQPLILGDVWLSVGWSNDILPVSDRYNKIKVVVPKSGTSL 286
Query: 353 WADLWAIPAASRLETKQIGGQVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALES 412
W+D+W P + P+ L+ QWI+FC Q A G SP L
Sbjct: 287 WSDVWVKPVLTT------------PNSLVQQWIDFCWQPESATKISL-FTSGLSPLILTE 333
Query: 413 TLVKLPEEL 421
L ++P ++
Sbjct: 334 NLDQIPPDI 342
>gi|425459716|ref|ZP_18839202.1| Genome sequencing data, contig C304 [Microcystis aeruginosa PCC
9808]
gi|389827779|emb|CCI20808.1| Genome sequencing data, contig C304 [Microcystis aeruginosa PCC
9808]
Length = 382
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 82/222 (36%), Positives = 120/222 (54%), Gaps = 28/222 (12%)
Query: 187 LSFAIKKRFIEPIAEAEDQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIG 246
L AI I+P+ ++ +W K L +W+ + N G+++ GK+W APYRWG I
Sbjct: 109 LGKAISNGLIQPLDTSQLSNWSK-LPPRWQENMTRNAQGQLETEGKVWGAPYRWGMTVIA 167
Query: 247 YKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVIVAGGK--------------IA 292
Y + KF + P +DW D W PEL G+I+++++ REVI K
Sbjct: 168 YNEKKFAQFDWRP-QDWSDLWRPELTGKIALIDNRREVIGLTLKKLGYSYNSSDLKQVTG 226
Query: 293 VQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASL 352
++ L L QVR + S HYL+ +GDVW++VGWS+D+LP R + + VVVPKSG SL
Sbjct: 227 LKDQLFALQKQVRFYSSQHYLQPLILGDVWLSVGWSNDILPVSDRYNKIKVVVPKSGTSL 286
Query: 353 WADLWAIPAASRLETKQIGGQVRGPSPLIHQWIEFCLQTARA 394
W+D+W P + P+ L+ QWI+FC Q A
Sbjct: 287 WSDVWVKPVLTT------------PNSLVQQWIDFCWQPESA 316
>gi|300869610|ref|ZP_07114190.1| Periplasmic polyamine-binding protein of ABC transporter
[Oscillatoria sp. PCC 6506]
gi|300332388|emb|CBN59390.1| Periplasmic polyamine-binding protein of ABC transporter
[Oscillatoria sp. PCC 6506]
Length = 349
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 91/249 (36%), Positives = 133/249 (53%), Gaps = 26/249 (10%)
Query: 187 LSFAIKKRFIEPIAEAEDQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIG 246
L+ AI+++ I+P+ A+ +W +L W+ +R ND+G D +GKIWAAPYRWGT I
Sbjct: 70 LAKAIQQKLIQPLDPAKLTNW-SQLPPAWQTLVRRNDSGIADEKGKIWAAPYRWGTTVIV 128
Query: 247 YKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVIVAG-------------GKIA- 292
Y+ KF++ L P DW D W EL RIS++++PREVI K+A
Sbjct: 129 YRIDKFKSLGLKPPTDWSDLWREELRDRISLLDNPREVIGLTLKKLGKSYNTRDLNKVAN 188
Query: 293 VQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASL 352
+++ L+ L Q +L+ S YL+ +GD W AVGWS DVL ++ + VVP SG S+
Sbjct: 189 LKEELSNLHRQTKLYSSNSYLQPLVLGDTWAAVGWSGDVLRLMQNQKEIGAVVPISGTSM 248
Query: 353 WADLWAIPAASRLETKQIGGQVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALES 412
W DLW P +++ L+ QWI+FC Q A + +SP +
Sbjct: 249 WVDLWVQPVSNQ----------SSNLSLVEQWIDFCWQPQIATQMSL-LTQASSPVIISM 297
Query: 413 TLVKLPEEL 421
LPE+L
Sbjct: 298 KREDLPEQL 306
>gi|298492009|ref|YP_003722186.1| family 1 extracellular solute-binding protein ['Nostoc azollae'
0708]
gi|298233927|gb|ADI65063.1| extracellular solute-binding protein family 1 ['Nostoc azollae'
0708]
Length = 383
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 86/218 (39%), Positives = 117/218 (53%), Gaps = 28/218 (12%)
Query: 187 LSFAIKKRFIEPIAEAEDQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIG 246
L AI+++ I+P+ + + W L+ +W+ +R +D G IDP+GKIWAAPY WG I
Sbjct: 111 LKAAIEQKLIQPLETEKIKQWLS-LNLRWQQLVRRDDQGNIDPQGKIWAAPYHWGNTVII 169
Query: 247 YKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVI-VAGGKIAVQQN--------- 296
Y KFQ + P +DW D W EL RIS++N PREVI + K+ N
Sbjct: 170 YNGEKFQKFDWQP-KDWSDLWRSELRSRISLLNHPREVIGLVLKKLGESYNTENITQIPD 228
Query: 297 ----LALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASL 352
L L QV+ +DST YL+ GD W+AVGWS+DV+P + R + V+P+SG ++
Sbjct: 229 LKAELLALHQQVKFYDSTTYLEPLLTGDTWLAVGWSNDVMPILSRYPKLTAVIPQSGTAM 288
Query: 353 WADLWAIPAASRLETKQIGGQVRGPSPLIHQWIEFCLQ 390
WADLW PA T L WI FC Q
Sbjct: 289 WADLWVSPAEVEQNT------------LASDWINFCWQ 314
>gi|425434255|ref|ZP_18814726.1| Genome sequencing data, contig C304 [Microcystis aeruginosa PCC
9432]
gi|389676326|emb|CCH94643.1| Genome sequencing data, contig C304 [Microcystis aeruginosa PCC
9432]
Length = 382
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 82/222 (36%), Positives = 120/222 (54%), Gaps = 28/222 (12%)
Query: 187 LSFAIKKRFIEPIAEAEDQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIG 246
L AI I+P+ ++ +W K L +W+ + N G+++ GK+W APYRWG I
Sbjct: 109 LGKAISNGLIQPLDTSQLSNWSK-LPPRWQENMTRNAQGQLETEGKVWGAPYRWGMTVIA 167
Query: 247 YKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVIVAGGK--------------IA 292
Y + KF + P +DW D W PEL G+I+++++ REVI K
Sbjct: 168 YNEKKFAQFDWRP-QDWSDLWRPELTGKIALIDNRREVIGLTLKKLGYSYNYSDLKQVTG 226
Query: 293 VQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASL 352
++ L L QVR + S HYL+ +GDVW++VGWS+D+LP R + + VVVPKSG SL
Sbjct: 227 LKDQLFALQKQVRFYSSQHYLQPLILGDVWLSVGWSNDILPVSDRHNKIKVVVPKSGTSL 286
Query: 353 WADLWAIPAASRLETKQIGGQVRGPSPLIHQWIEFCLQTARA 394
W+D+W P + P+ L+ QWI+FC Q A
Sbjct: 287 WSDVWVKPVLTT------------PNSLVQQWIDFCWQPESA 316
>gi|428211975|ref|YP_007085119.1| spermidine/putrescine-binding periplasmic protein [Oscillatoria
acuminata PCC 6304]
gi|428000356|gb|AFY81199.1| spermidine/putrescine-binding periplasmic protein [Oscillatoria
acuminata PCC 6304]
Length = 417
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 92/250 (36%), Positives = 128/250 (51%), Gaps = 22/250 (8%)
Query: 187 LSFAIKKRFIEPIAEAEDQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIG 246
L AI + I P+ W L +W+ +R N G++DP G++W APYRWGT I
Sbjct: 135 LERAIAQELILPLDPTPLDQW-DNLPSQWQTLVRRNAEGQLDPEGQVWGAPYRWGTTVIA 193
Query: 247 YKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVIVAGGKI--------------A 292
Y+ +F+N P +DW D W PEL R+S+++SPREVI K
Sbjct: 194 YRVDRFRNLGWTP-QDWSDLWRPELRDRLSLLDSPREVIGLTLKTLGHSYNRDRLDDLPE 252
Query: 293 VQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASL 352
+Q+ L L Q RL+ S YL+ +GD WVAVGWS+D+L ++R + VVP SG +L
Sbjct: 253 LQEQLLALHRQARLYSSDAYLQPLLLGDTWVAVGWSTDILATMQRNPQIRAVVPPSGTAL 312
Query: 353 WADLWAIPAASRLETKQIGGQVRGP-SPLIHQWIEFCLQTARALPFKQEVIPGASPSALE 411
W++LW PA + + P S L +QWI FC A+ Q + ASP L
Sbjct: 313 WSELWVRPAGP----NPVNPETPTPASSLANQWINFCWNPEMAVQLSQ-LSKAASPMLLN 367
Query: 412 STLVKLPEEL 421
+LP L
Sbjct: 368 RDRGELPNAL 377
>gi|428769711|ref|YP_007161501.1| periplasmic polyamine-binding protein [Cyanobacterium aponinum PCC
10605]
gi|428683990|gb|AFZ53457.1| periplasmic polyamine-binding protein [Cyanobacterium aponinum PCC
10605]
Length = 380
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 83/222 (37%), Positives = 124/222 (55%), Gaps = 27/222 (12%)
Query: 187 LSFAIKKRFIEPIAEAEDQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIG 246
L FAI+ I+P+ ++W K LS ++ + N+ G++D +G+IW APYRWG I
Sbjct: 116 LPFAIENELIDPLDLKILENWSK-LSPLFQKLVIRNNQGKLDNQGQIWGAPYRWGYTMIA 174
Query: 247 YKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVI-VAGGKIAVQQN--------- 296
Y++ K QN P +DW+D W PE+ R S++N PREVI + K+ N
Sbjct: 175 YREDKLQNLGWQP-QDWEDLWKPEIKHRFSLLNQPREVIGLVLKKLGYSYNTKNLKQINN 233
Query: 297 ----LALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASL 352
L L QV+ +DS +YL+ +GD W+AVGWS+D++P ++R N+ V+P SG SL
Sbjct: 234 LLPELKTLNQQVKFYDSRNYLQPLILGDTWLAVGWSTDIIPLIERYHNIKAVIPLSGTSL 293
Query: 353 WADLWAIPAASRLETKQIGGQVRGPSPLIHQWIEFCLQTARA 394
WAD+W P E ++ I+ WI+FC Q+ A
Sbjct: 294 WADIWVKPRNQSSELEK-----------IYNWIDFCWQSKSA 324
>gi|170076941|ref|YP_001733579.1| periplasmic binding protein of ABC transporter [Synechococcus sp.
PCC 7002]
gi|169884610|gb|ACA98323.1| periplasmic binding protein of ABC transporter [Synechococcus sp.
PCC 7002]
Length = 377
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 88/238 (36%), Positives = 127/238 (53%), Gaps = 28/238 (11%)
Query: 190 AIKKRFIEPIAEAEDQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIGYKK 249
AI F++P++ E W + L W+ +LR N GEIDP+G++W PYRWGT + Y+K
Sbjct: 108 AIALGFVQPLSLEELTRW-EELGEPWQRFLRRNVQGEIDPQGQLWGQPYRWGTTMLVYRK 166
Query: 250 SKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVI----VAGGK---------IA-VQQ 295
K +N P DW D W PEL G+IS++N REV+ GK IA ++
Sbjct: 167 DKLKNLGWTPT-DWADLWRPELQGKISLLNQSREVLGLLLKKQGKSYNETDPEAIANLES 225
Query: 296 NLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWAD 355
+ L QV+ + STHYL+ +GD W+A GWS D+LP ++R N+ V+P SG +LW D
Sbjct: 226 DFQTLHRQVKFYSSTHYLQPLNMGDTWIAQGWSQDILPLLQRYRNLGAVIPASGTALWCD 285
Query: 356 LWAIPAASRLETKQIGGQVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALEST 413
LW P S+ + + W++FC + A A+ GASP +T
Sbjct: 286 LWVQPQRSQTSFE-----------TLKTWLDFCWEPA-AIQQISRSSHGASPLIYAAT 331
>gi|409993345|ref|ZP_11276490.1| periplasmic polyamine-binding protein of ABC transporter
[Arthrospira platensis str. Paraca]
gi|291567216|dbj|BAI89488.1| putative ABC transporter substrate-binding protein [Arthrospira
platensis NIES-39]
gi|409935824|gb|EKN77343.1| periplasmic polyamine-binding protein of ABC transporter
[Arthrospira platensis str. Paraca]
Length = 389
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 95/252 (37%), Positives = 133/252 (52%), Gaps = 31/252 (12%)
Query: 187 LSFAIKKRFIEPIAEAEDQDWFKRLSHKWKVYLRSNDAGEIDP--RGKIWAAPYRWGTMA 244
LS AI++ IEP+ ED +++L W+ +R N GE+ G IW APYRWGT A
Sbjct: 109 LSAAIREELIEPL-NPEDLSQWQQLPQNWQNLVRRNQNGELSDSLEGNIWGAPYRWGTTA 167
Query: 245 IGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVI-VAGGKIAVQQN------- 296
I Y+ KF+ P DW+D W E GRIS++N REVI + K+ N
Sbjct: 168 IAYRVDKFEKLGWTPT-DWEDLWRSECKGRISLLNQGREVIGLTLKKLGYSYNTPDLDLV 226
Query: 297 ------LALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGA 350
L L VRL+DS +YLK +GD W+AVGWS D+ P ++R N+A+ +PKSG
Sbjct: 227 PDLKAQLEQLHQNVRLYDSDNYLKPLILGDTWLAVGWSGDISPQLQRQHNIAIAIPKSGT 286
Query: 351 SLWADLWAIPAASRLETKQIGGQVRGPSPLIHQWIEFCLQTARALPFKQEVIPGA-SPSA 409
+LW+D+W P A+ +PL+ WI+FC Q A + ++ GA SP
Sbjct: 287 ALWSDVWVKPKATSATN----------NPLVQAWIDFCWQPEIAT--QMSLLTGATSPIV 334
Query: 410 LESTLVKLPEEL 421
LP++L
Sbjct: 335 WGMPRADLPKDL 346
>gi|434405536|ref|YP_007148421.1| spermidine/putrescine-binding periplasmic protein [Cylindrospermum
stagnale PCC 7417]
gi|428259791|gb|AFZ25741.1| spermidine/putrescine-binding periplasmic protein [Cylindrospermum
stagnale PCC 7417]
Length = 382
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 82/218 (37%), Positives = 122/218 (55%), Gaps = 28/218 (12%)
Query: 187 LSFAIKKRFIEPIAEAEDQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIG 246
L AI+++ I+P+ + + W L KW+ ++ +D G ++P+GK+W APYRWG+ I
Sbjct: 112 LKAAIEQKLIQPLEVEQVKQW-SVLDQKWQKLVQRDDLGNLNPQGKVWGAPYRWGSTVIV 170
Query: 247 YKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVI-VAGGKIA------------- 292
Y + KF+ + P DW D W EL RIS++N PREVI + K+
Sbjct: 171 YNREKFEKLDWRP-RDWNDLWRDELQQRISLLNQPREVIGLVLKKLGKSYNTENLDQIPE 229
Query: 293 VQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASL 352
+Q L L QV+ + S +YL+ IGD W+AVGWSSD++P + R + VV+P+SG ++
Sbjct: 230 LQTELQKLNQQVKFYSSNNYLEPLIIGDTWLAVGWSSDIVPLLGRYPQLTVVIPQSGTAI 289
Query: 353 WADLWAIPAASRLETKQIGGQVRGPSPLIHQWIEFCLQ 390
WADLW P G + L +QWI+FC Q
Sbjct: 290 WADLWVRPTGV------------GKASLPYQWIDFCWQ 315
>gi|440756421|ref|ZP_20935622.1| twin-arginine translocation pathway signal sequence domain protein
[Microcystis aeruginosa TAIHU98]
gi|440173643|gb|ELP53101.1| twin-arginine translocation pathway signal sequence domain protein
[Microcystis aeruginosa TAIHU98]
Length = 382
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 81/222 (36%), Positives = 121/222 (54%), Gaps = 28/222 (12%)
Query: 187 LSFAIKKRFIEPIAEAEDQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIG 246
L AI I+P+ ++ +W K L +W+ + N G+++ GK+W APYRWG I
Sbjct: 109 LGKAISNGLIQPLDTSQLSNWSK-LPPRWQENMTRNAQGQLETEGKVWGAPYRWGMTVIA 167
Query: 247 YKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVIVAGGK--------------IA 292
Y + KF + P +DW D W PEL G+I+++++ REVI K +
Sbjct: 168 YNEKKFAQFDWRP-QDWSDLWRPELTGKIALIDNRREVIGLTLKKLGYSYNSSDLKQVMG 226
Query: 293 VQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASL 352
++ L L QVR + S +YL+ +GDVW++VGWS+D+LP R + + VVVPKSG SL
Sbjct: 227 LKDQLFALQKQVRFYSSQYYLQPLILGDVWLSVGWSNDILPVSDRYNKIKVVVPKSGTSL 286
Query: 353 WADLWAIPAASRLETKQIGGQVRGPSPLIHQWIEFCLQTARA 394
W+D+W P + P+ L+ QWI+FC Q A
Sbjct: 287 WSDVWVKPVLTT------------PNSLVQQWIDFCWQPESA 316
>gi|425472395|ref|ZP_18851246.1| Periplasmic polyamine-binding protein [Microcystis aeruginosa PCC
9701]
gi|389881535|emb|CCI37923.1| Periplasmic polyamine-binding protein [Microcystis aeruginosa PCC
9701]
Length = 382
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 82/222 (36%), Positives = 119/222 (53%), Gaps = 28/222 (12%)
Query: 187 LSFAIKKRFIEPIAEAEDQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIG 246
L AI I+P+ ++ +W K L +W+ + N G+ GK+W APYRWG I
Sbjct: 109 LGKAISNGLIQPLDTSQLSNWSK-LPPRWQENMTRNAQGQPQTEGKVWGAPYRWGMTVIA 167
Query: 247 YKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVIVAGGK--------------IA 292
Y + KF + P +DW D W PEL G+I+++++ REVI K +
Sbjct: 168 YNEEKFAQFDWRP-QDWSDLWRPELTGKIALIDNRREVIGLTLKKLGYSYNSSDLKQVMG 226
Query: 293 VQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASL 352
++ L L QV+ + S HYL+ +GDVWV+VGWS+D+LP R + + VVVPKSG SL
Sbjct: 227 LKDQLFALQKQVKFYSSQHYLQPLILGDVWVSVGWSNDILPVSNRYNKIKVVVPKSGTSL 286
Query: 353 WADLWAIPAASRLETKQIGGQVRGPSPLIHQWIEFCLQTARA 394
W+D+W P + P+ L+ QWI+FC Q A
Sbjct: 287 WSDVWVKPVLTT------------PNSLVQQWIDFCWQPESA 316
>gi|425451461|ref|ZP_18831282.1| Genome sequencing data, contig C304 [Microcystis aeruginosa PCC
7941]
gi|389767205|emb|CCI07314.1| Genome sequencing data, contig C304 [Microcystis aeruginosa PCC
7941]
Length = 392
Score = 154 bits (390), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 81/222 (36%), Positives = 120/222 (54%), Gaps = 28/222 (12%)
Query: 187 LSFAIKKRFIEPIAEAEDQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIG 246
L AI I+P+ ++ +W K L +W+ + N G+++ GK+W APYRWG I
Sbjct: 109 LGKAISNGLIQPLDTSQLSNWSK-LPPRWQENMTRNAQGQLETEGKVWGAPYRWGMTVIA 167
Query: 247 YKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVIVAGGK--------------IA 292
Y + KF + P +DW D W PEL G+I+++++ REVI K
Sbjct: 168 YNEKKFAQFDWRP-QDWSDLWRPELTGKIALIDNRREVIGLTLKKLGYSYNYSDLKQVTG 226
Query: 293 VQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASL 352
++ L L QVR + S +YL+ +GDVW++VGWS+D+LP R + + VVVPKSG SL
Sbjct: 227 LKDQLFALQKQVRFYSSQYYLQPLILGDVWLSVGWSNDILPVSDRYNKIKVVVPKSGTSL 286
Query: 353 WADLWAIPAASRLETKQIGGQVRGPSPLIHQWIEFCLQTARA 394
W+D+W P + P+ L+ QWI+FC Q A
Sbjct: 287 WSDVWVKPVLTT------------PNSLVEQWIDFCWQPESA 316
>gi|422303925|ref|ZP_16391274.1| Genome sequencing data, contig C304 [Microcystis aeruginosa PCC
9806]
gi|389791060|emb|CCI13120.1| Genome sequencing data, contig C304 [Microcystis aeruginosa PCC
9806]
Length = 382
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 82/222 (36%), Positives = 120/222 (54%), Gaps = 28/222 (12%)
Query: 187 LSFAIKKRFIEPIAEAEDQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIG 246
L I I+P+ ++ +W K L +W+ + N G+ GK+WAAPYRWG I
Sbjct: 109 LGKVITNGLIQPLDTSQLSNWSK-LPPRWQENMTRNAQGQPQTEGKVWAAPYRWGMTVIA 167
Query: 247 YKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVIVAGGK--------------IA 292
Y + KF + P +DW D W PEL+G+I+++++ REVI K +
Sbjct: 168 YNEEKFAQFDWRP-QDWSDLWRPELSGKIALIDNRREVIGLTLKKLGYSYNSSNLKQVTS 226
Query: 293 VQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASL 352
++ L L QVR + S HYL+ +GDVW++VGWS+D+LP R + + VVVPKSG SL
Sbjct: 227 LKDQLFALQKQVRFYSSQHYLQPLILGDVWLSVGWSNDILPVSDRYNKIKVVVPKSGTSL 286
Query: 353 WADLWAIPAASRLETKQIGGQVRGPSPLIHQWIEFCLQTARA 394
W+D+W P + P+ L+ QWI FC Q+ A
Sbjct: 287 WSDVWVKPVLTT------------PNSLVDQWINFCWQSESA 316
>gi|428223996|ref|YP_007108093.1| extracellular solute-binding protein [Geitlerinema sp. PCC 7407]
gi|427983897|gb|AFY65041.1| extracellular solute-binding protein family 1 [Geitlerinema sp. PCC
7407]
Length = 388
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 85/222 (38%), Positives = 124/222 (55%), Gaps = 24/222 (10%)
Query: 190 AIKKRFIEPIAEAEDQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIGYKK 249
AI++ I+P+ Q+W + W+ + N+ G + P G +W APYRWGT I Y+K
Sbjct: 114 AIQQGLIQPLRPETWQNW-ASIPEAWRRISQRNEQGLVSPAGSVWGAPYRWGTTVIAYRK 172
Query: 250 SKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVI-VAGGKIAVQQNLA---------- 298
KF+ + L P +DW D W P L GR+S+++ REVI + K+ N+A
Sbjct: 173 DKFERNGLRPPQDWADLWQPGLRGRLSLLDQEREVIGLVLKKLGQSYNVADPTTVTGLVE 232
Query: 299 ---LLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWAD 355
L QV+ ++ST YL+ +GD W AVGWS+DVLP ++ ++AVVVP+SG +LWAD
Sbjct: 233 EARSLHQQVKFYNSTAYLEPLLLGDTWAAVGWSTDVLPLLESQRHLAVVVPQSGTALWAD 292
Query: 356 LWAIPAASRLETKQIGGQVRGPSPLIHQWIEFCLQTARALPF 397
+W AA E Q L+++WI+FC A A F
Sbjct: 293 VWVQAAAPASEAVQ---------DLMNEWIDFCWNPAIAGQF 325
>gi|425443832|ref|ZP_18823896.1| Genome sequencing data, contig C304 [Microcystis aeruginosa PCC
9443]
gi|389733602|emb|CCI02643.1| Genome sequencing data, contig C304 [Microcystis aeruginosa PCC
9443]
Length = 382
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 82/222 (36%), Positives = 120/222 (54%), Gaps = 28/222 (12%)
Query: 187 LSFAIKKRFIEPIAEAEDQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIG 246
L AI I+P+ ++ +W K L +W+ + N G+ GK+WAAPYRWG I
Sbjct: 109 LGKAISNGLIQPLDTSQLSNWSK-LPPRWQENMTRNAQGQPQTEGKVWAAPYRWGMTVIA 167
Query: 247 YKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVIVAGGK--------------IA 292
Y + KF + P +DW D W PEL G+I+++++ REVI K +
Sbjct: 168 YNEEKFAQFDWRP-QDWSDLWRPELTGKIALIDNRREVIGLTLKKLGYSYNSSDLKQVMG 226
Query: 293 VQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASL 352
++ L L QVR + S +YL+ +GDVW++VGWS+D+LP R + + VVVPKSG SL
Sbjct: 227 LKDQLFALQKQVRFYSSQYYLQPLILGDVWLSVGWSNDILPVGDRYNKIKVVVPKSGTSL 286
Query: 353 WADLWAIPAASRLETKQIGGQVRGPSPLIHQWIEFCLQTARA 394
W+D+W P + P+ L+ QWI+FC Q A
Sbjct: 287 WSDVWVKPVLTT------------PNSLVQQWIDFCWQPESA 316
>gi|166363771|ref|YP_001656044.1| periplasmic polyamine-binding protein [Microcystis aeruginosa
NIES-843]
gi|166086144|dbj|BAG00852.1| periplasmic polyamine-binding protein [Microcystis aeruginosa
NIES-843]
Length = 382
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 81/222 (36%), Positives = 119/222 (53%), Gaps = 28/222 (12%)
Query: 187 LSFAIKKRFIEPIAEAEDQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIG 246
L AI I+P+ ++ +W K L +W+ + N G+ GK+W APYRWG I
Sbjct: 109 LGKAITNGLIQPLDTSQLSNWSK-LPPRWQENMTRNAQGQPQTEGKVWGAPYRWGMTVIA 167
Query: 247 YKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVIVAGGK--------------IA 292
Y + KF + P +DW D W PEL G+I+++++ REVI K +
Sbjct: 168 YNEEKFAQFDWRP-QDWSDLWRPELTGKIALIDNRREVIGLTLKKMGYSYNSSDLKQVMG 226
Query: 293 VQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASL 352
++ L L QV+ + S HYL+ +GDVW++VGWS+D+LP R + + VVVPKSG SL
Sbjct: 227 LKDQLFALQKQVKFYSSQHYLQPLILGDVWLSVGWSNDILPVSDRYNKIKVVVPKSGTSL 286
Query: 353 WADLWAIPAASRLETKQIGGQVRGPSPLIHQWIEFCLQTARA 394
W+D+W P + P+ L+ QWI+FC Q A
Sbjct: 287 WSDVWVKPVLTT------------PNSLVEQWIDFCWQPESA 316
>gi|428304513|ref|YP_007141338.1| extracellular solute-binding protein [Crinalium epipsammum PCC
9333]
gi|428246048|gb|AFZ11828.1| extracellular solute-binding protein family 1 [Crinalium epipsammum
PCC 9333]
Length = 391
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 89/255 (34%), Positives = 140/255 (54%), Gaps = 24/255 (9%)
Query: 187 LSFAIKKRFIEPIAEAEDQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIG 246
L AI+++ I+PIA + ++W +++ +W+ ++ N+ G++D GKIW APYRWG+ I
Sbjct: 109 LESAIQQQLIQPIALDKLKNW-QQMPKQWQELVQRNEQGQLDAAGKIWGAPYRWGSTVIA 167
Query: 247 YKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVIVAGGK--------------IA 292
Y+K KF++ P +W D W E GRIS+++ PRE+I K
Sbjct: 168 YRKDKFKSLGWTPT-NWSDLWREECKGRISLLDQPREIIGLTLKHLGYSYNTTNLDEIKN 226
Query: 293 VQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASL 352
++ L L V+L+ S YL+ +GD W+AVGWS+DVL A+K +A VVP+SG +L
Sbjct: 227 LKDALKKLHQNVKLYSSDTYLQPLILGDTWLAVGWSTDVLKAIKSEPKIAAVVPQSGTAL 286
Query: 353 WADLWAIPAASRLETKQIGGQVRGPSPLIHQWIEFCLQ--TARALPFKQEVIPGASPSAL 410
WAD+W P +L + L QWI+FC Q +A A+ E + SP +
Sbjct: 287 WADVWVRP---KLASANSTSDTPNLQTLADQWIDFCWQPKSASAISIFTEAV---SPVLI 340
Query: 411 ESTLVKLPEELLKGK 425
+P++L+K +
Sbjct: 341 NMDGNDIPKDLVKNQ 355
>gi|425456329|ref|ZP_18836040.1| Genome sequencing data, contig C304 [Microcystis aeruginosa PCC
9807]
gi|389802604|emb|CCI18362.1| Genome sequencing data, contig C304 [Microcystis aeruginosa PCC
9807]
Length = 382
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 86/249 (34%), Positives = 129/249 (51%), Gaps = 29/249 (11%)
Query: 187 LSFAIKKRFIEPIAEAEDQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIG 246
L AI I+P+ ++ +W K L +W+ + N G+ GK+WAAPYRWG I
Sbjct: 109 LGKAISNGLIQPLDTSQLSNWSK-LPPRWQENMTRNAQGQPQTEGKVWAAPYRWGMTVIA 167
Query: 247 YKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVIVAGGK--------------IA 292
Y + KF + P +DW D W PEL G+I+++++ REVI K +
Sbjct: 168 YNEEKFAQFDWRP-QDWSDLWRPELTGKIALIDNRREVIGLTLKKLGYSYNYSDLKQVMG 226
Query: 293 VQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASL 352
++ L L +VR + S +YL+ +GDVW++VGWS+D+LP R + + VVVPKSG SL
Sbjct: 227 LKDQLFALQKRVRFYSSQYYLQPLILGDVWLSVGWSNDILPVSDRYNKIKVVVPKSGTSL 286
Query: 353 WADLWAIPAASRLETKQIGGQVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALES 412
W+D+W P + P+ L+ QWI+FC Q A G SP L
Sbjct: 287 WSDVWVKPVLTT------------PNSLVEQWIDFCWQPESATKISL-FTSGLSPLVLTE 333
Query: 413 TLVKLPEEL 421
++P ++
Sbjct: 334 NPDQIPSDI 342
>gi|17227795|ref|NP_484343.1| periplasmic polyamine-binding protein of ABC transporter [Nostoc
sp. PCC 7120]
gi|17135277|dbj|BAB77823.1| periplasmic polyamine-binding protein of ABC transporter [Nostoc
sp. PCC 7120]
Length = 388
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 85/218 (38%), Positives = 125/218 (57%), Gaps = 28/218 (12%)
Query: 187 LSFAIKKRFIEPIAEAEDQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIG 246
L+ AI+++ I+ I + + W L +W+ + N+ G DP+GK+WAAPYRWG+ I
Sbjct: 118 LTTAIERKLIQAIETEQLKQW-SGLDSRWRELVTRNEQGVPDPQGKVWAAPYRWGSTVIV 176
Query: 247 YKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVI----VAGGKIAVQQNLALLAN 302
Y + KF+ P +DW D W EL RIS+++ PRE+I GK +NLA + +
Sbjct: 177 YDREKFKKLGWIP-QDWSDLWRSELRSRISVLDQPREIIGLVLKKLGKSYNTENLATVPD 235
Query: 303 ----------QVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASL 352
QV+++ S YL+ +GD W+AVGWSSD++P + R ++VV+P+SG S+
Sbjct: 236 LEKELQTFNQQVKIYSSNTYLEPLILGDTWLAVGWSSDLIPVLARYPQLSVVIPRSGTSI 295
Query: 353 WADLWAIPAASRLETKQIGGQVRGPSPLIHQWIEFCLQ 390
WADLW P ET + G L QWI+FCLQ
Sbjct: 296 WADLWVSPK----ETAKDG--------LSSQWIDFCLQ 321
>gi|443313248|ref|ZP_21042860.1| spermidine/putrescine-binding periplasmic protein [Synechocystis
sp. PCC 7509]
gi|442776653|gb|ELR86934.1| spermidine/putrescine-binding periplasmic protein [Synechocystis
sp. PCC 7509]
Length = 383
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 81/217 (37%), Positives = 118/217 (54%), Gaps = 27/217 (12%)
Query: 186 KLSFAIKKRFIEPIAEAEDQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAI 245
+L AI ++ I+P+ E D ++ L +W+ +R N GE+D G+IWAAPYRWG I
Sbjct: 111 RLKEAIAQKLIQPL-EITDLSQWQNLPSRWQELVRRNAQGEVDINGQIWAAPYRWGNTVI 169
Query: 246 GYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVI-VAGGKIAVQQN-------- 296
Y + KF++ P +W D W EL RIS+ N PREVI + K+ N
Sbjct: 170 AYNRKKFESLGWTPT-NWSDLWREELRSRISLPNQPREVIGLTLKKLGYSYNSQNLQQVS 228
Query: 297 -----LALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGAS 351
L L QV+ + S Y++ +GD W+AVGWSSDV+P ++R +A +VP+SG++
Sbjct: 229 QLADQLKTLHQQVKFYSSDRYMEPLILGDTWLAVGWSSDVIPVIQRYQEIAAIVPQSGSA 288
Query: 352 LWADLWAIPAASRLETKQIGGQVRGPSPLIHQWIEFC 388
+WAD+W P S + L QWI+FC
Sbjct: 289 IWADVWVSPTKSPVNKL-----------LAKQWIDFC 314
>gi|428774536|ref|YP_007166324.1| extracellular solute-binding protein [Cyanobacterium stanieri PCC
7202]
gi|428688815|gb|AFZ48675.1| extracellular solute-binding protein family 1 [Cyanobacterium
stanieri PCC 7202]
Length = 378
Score = 151 bits (382), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 80/222 (36%), Positives = 124/222 (55%), Gaps = 24/222 (10%)
Query: 187 LSFAIKKRFIEPIAEAEDQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIG 246
LS AI++ I+P+ + E +W + ++ + N+ G+ID G+IW APYRWG I
Sbjct: 111 LSLAIQENLIQPLNQNELNNW-ANIPPVFQNLVMRNNQGDIDGNGQIWGAPYRWGYTMIA 169
Query: 247 YKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVI-VAGGKIAVQQN--------- 296
Y++ K P +DW D W EL +IS+++ PRE+I + K+ N
Sbjct: 170 YREDKIAPLGFTP-KDWSDLWRVELMNQISLLSQPREIIGLILKKLGYSYNTNNIQEIED 228
Query: 297 ----LALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASL 352
L L NQV+ +DST+YL+ GD W+AVGWS+D+LP +++ N+ V+P+SG SL
Sbjct: 229 VYRELTTLNNQVKFYDSTNYLQPLINGDTWLAVGWSTDILPVLEQHRNIRAVIPESGTSL 288
Query: 353 WADLWAIPAASRLETKQIGGQVRGPSPLIHQWIEFCLQTARA 394
WAD+W P + L +++G I++WI +C Q A
Sbjct: 289 WADIWVQPYENNLSEEKLGE--------IYRWINYCWQEDSA 322
>gi|427731993|ref|YP_007078230.1| spermidine/putrescine-binding periplasmic protein [Nostoc sp. PCC
7524]
gi|427367912|gb|AFY50633.1| spermidine/putrescine-binding periplasmic protein [Nostoc sp. PCC
7524]
Length = 382
Score = 151 bits (382), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 85/242 (35%), Positives = 130/242 (53%), Gaps = 30/242 (12%)
Query: 187 LSFAIKKRFIEPIAEAEDQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIG 246
L I++R I+P+ A+ + W L +W+ +R ND G DP+GK+WAAPYRWG+ I
Sbjct: 111 LKTVIEQRLIQPLEPAQLKQW-TELDARWQQLVRRNDQGFPDPQGKVWAAPYRWGSTVIV 169
Query: 247 YKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVI-VAGGKIA------------- 292
Y + KF++ P +DW D W E+ R S+++ PREVI + K+
Sbjct: 170 YNQDKFKDLGWMP-QDWSDLWREEMRSRFSLLDHPREVIGLVLKKLGKSYNTENLDAVPQ 228
Query: 293 VQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASL 352
++Q L L Q + + S YL+ IGD W+AVGWS+DV+P + R + +++P+SG ++
Sbjct: 229 LEQELRTLNQQAKFYSSNTYLQPLIIGDTWLAVGWSNDVVPILSRYPQMKMIIPRSGTAI 288
Query: 353 WADLWAIPAASRLETKQIGGQVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALES 412
WADLW P + + L QWI+FC Q A KQ V+ S S + +
Sbjct: 289 WADLWVSPKGANQDDN-----------LSSQWIDFCWQPNIA---KQIVVRTKSNSPIPT 334
Query: 413 TL 414
+
Sbjct: 335 NI 336
>gi|425467732|ref|ZP_18847011.1| Periplasmic polyamine-binding protein [Microcystis aeruginosa PCC
9809]
gi|389829411|emb|CCI29285.1| Periplasmic polyamine-binding protein [Microcystis aeruginosa PCC
9809]
Length = 382
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 81/222 (36%), Positives = 118/222 (53%), Gaps = 28/222 (12%)
Query: 187 LSFAIKKRFIEPIAEAEDQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIG 246
L AI I+P+ ++ +W K L +W+ + N G+ GK+W APYRWG I
Sbjct: 109 LGKAITNGLIQPLDTSQLSNWSK-LPPRWQENMTRNAQGQPQTEGKVWGAPYRWGMTVIA 167
Query: 247 YKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVIVAGGK--------------IA 292
Y + KF + P +DW D W PEL G+I+++++ REVI K A
Sbjct: 168 YNEEKFAQFDWRP-QDWSDLWRPELTGKIALIDNRREVIGLTLKKLGYSYNYSDLKQVTA 226
Query: 293 VQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASL 352
++ L L QV+ + S +YL+ +GDVW++VGWS+D+LP R + VVVPKSG SL
Sbjct: 227 LKDQLFALQKQVKFYSSQYYLQPLILGDVWLSVGWSNDILPVSDRYKKIKVVVPKSGTSL 286
Query: 353 WADLWAIPAASRLETKQIGGQVRGPSPLIHQWIEFCLQTARA 394
W+D+W P + P+ L+ QWI+FC Q A
Sbjct: 287 WSDVWVKPVLTT------------PNSLVEQWIDFCWQPESA 316
>gi|428204536|ref|YP_007083125.1| spermidine/putrescine-binding periplasmic protein [Pleurocapsa sp.
PCC 7327]
gi|427981968|gb|AFY79568.1| spermidine/putrescine-binding periplasmic protein [Pleurocapsa sp.
PCC 7327]
Length = 399
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 82/222 (36%), Positives = 119/222 (53%), Gaps = 24/222 (10%)
Query: 187 LSFAIKKRFIEPIAEAEDQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIG 246
L AI ++ I P+ + W +RL +W+ +R N+ G D RG+IW APYRWG+ I
Sbjct: 110 LEKAIVEQLIRPLNVNDLTGW-QRLPTRWQALVRRNEQGMPDERGQIWGAPYRWGSTLIA 168
Query: 247 YKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVIVAGGKIA-------------- 292
Y++ +F+ P DW D W EL RIS+++ PREVI K
Sbjct: 169 YRQEEFEKLGWLPT-DWGDLWREELRDRISLLDQPREVIGLTLKKLKHSYNSQDLNKIPN 227
Query: 293 VQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASL 352
++ L L QV+ + S YL+ +GD W+AVGWSSD+L +R + V+P+SG SL
Sbjct: 228 LKSELLSLHRQVKFYSSDRYLQPLILGDTWLAVGWSSDILALTERYRTIKAVIPRSGTSL 287
Query: 353 WADLWAIPAASRLETKQIGGQVRGPSPLIHQWIEFCLQTARA 394
WAD+W PA+ + + + L+ QWI+FC QT A
Sbjct: 288 WADIWVQPASVQ--------ETSDRTSLLKQWIDFCWQTQSA 321
>gi|308813680|ref|XP_003084146.1| putrescine-binding periplasmic protein-related (ISS) [Ostreococcus
tauri]
gi|116056029|emb|CAL58562.1| putrescine-binding periplasmic protein-related (ISS) [Ostreococcus
tauri]
Length = 429
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 106/349 (30%), Positives = 160/349 (45%), Gaps = 55/349 (15%)
Query: 123 EFENWKWKTYALTVPLRVVSLQNSVPQSWVKDFMRSQGKRLKFQMNLCASIDGIVNNLST 182
E++ YA VPL+V +L+ S Q+ ++F ++Q +R+K +++ SI L
Sbjct: 58 EYDRRLVDAYAFDVPLKVRALRGSTAQNASREFAQTQTRRVKLELSTTPSIARSYEELLR 117
Query: 183 PFNK---------------LSFAIKKRFIEPIAEAEDQDWFKRLSHKWKVYLRSN-DAGE 226
P + L AI++ I PI AE W+ + W+ +R + +G
Sbjct: 118 PGKRIGKKGIDCATLGDEWLRPAIERGLILPIPNAERSAWWNAIPPVWRQLVRRDPRSGL 177
Query: 227 IDPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVI- 285
+ G I+ APYR+G + I Y+K K + P DW D + P L G I M N+PR V+
Sbjct: 178 LSSSGDIFGAPYRFGCVTIAYRKDKLP-KGVKPPTDWSDLFDPRLQGMIGMPNAPRLVLS 236
Query: 286 --------------VAGGKIAVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDV 331
V G V + L V++FD YL+A GD V VG S DV
Sbjct: 237 AALKAEGMSVNVGDVGGVDGRVSARVRQLRESVKVFDDLQYLQALACGDCAVVVGPSEDV 296
Query: 332 LPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGQVRGPSPLIHQWIEFCLQT 391
+R + + VVP+SG +LW+D W +P S +GG GPSP + QWI + L
Sbjct: 297 FSVARRSTLIVPVVPRSGTTLWSDCWVVPTTS---VTNVGG---GPSPALEQWINYTLSP 350
Query: 392 ARALPFKQEVIPGASP-----SALESTLVKLP-----------EELLKG 424
AR + + + G SP +ES + P E++LKG
Sbjct: 351 AR-VNMRVGLKGGISPLMFDGRGIESGYARYPNVARPVLGTSDEDMLKG 398
>gi|425439720|ref|ZP_18820036.1| Periplasmic polyamine-binding protein [Microcystis aeruginosa PCC
9717]
gi|389720001|emb|CCH96242.1| Periplasmic polyamine-binding protein [Microcystis aeruginosa PCC
9717]
Length = 382
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 80/222 (36%), Positives = 118/222 (53%), Gaps = 28/222 (12%)
Query: 187 LSFAIKKRFIEPIAEAEDQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIG 246
L AI I+P+ ++ +W K L +W+ + N G+ GK+W APYRWG I
Sbjct: 109 LGKAITNGLIQPLDTSQLSNWSK-LPPRWQENMARNAQGQPQTEGKVWGAPYRWGMTVIA 167
Query: 247 YKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVIVAGGK--------------IA 292
Y + KF + P +DW D W PEL G+I+++++ REVI K A
Sbjct: 168 YNEEKFAQFDWRP-QDWSDLWRPELTGKIALIDNRREVIGLTLKKLGYSYNSSDLKQVTA 226
Query: 293 VQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASL 352
++ L L QV+ + +YL+ +GDVW++VGWS+D+LP R + + VVVPKSG SL
Sbjct: 227 LKDQLFALQKQVKFYSYQYYLQPLILGDVWLSVGWSNDILPVSDRYNKIKVVVPKSGTSL 286
Query: 353 WADLWAIPAASRLETKQIGGQVRGPSPLIHQWIEFCLQTARA 394
W+D+W P + P+ L+ QWI+FC Q A
Sbjct: 287 WSDVWVKPVLTT------------PNSLVEQWIDFCWQPESA 316
>gi|440681216|ref|YP_007156011.1| extracellular solute-binding protein family 1 [Anabaena cylindrica
PCC 7122]
gi|428678335|gb|AFZ57101.1| extracellular solute-binding protein family 1 [Anabaena cylindrica
PCC 7122]
Length = 383
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 88/257 (34%), Positives = 129/257 (50%), Gaps = 38/257 (14%)
Query: 187 LSFAIKKRFIEPIAEAEDQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIG 246
L AI+++ I+P+ + + W L KW+ + + G ++P+G++W APYRWG I
Sbjct: 111 LKAAIEQKLIQPLQTEKIKQW-PVLEQKWQQLVTRDKQGNVNPQGQVWGAPYRWGNTVIV 169
Query: 247 YKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVI-VAGGKIAVQQN--------- 296
Y + KFQ + P +DW D W EL IS++N PRE+I + K+ N
Sbjct: 170 YNREKFQKLDWQP-KDWSDLWRSELRSHISLLNHPREIIGLVLKKLGQSYNTENLDQIPS 228
Query: 297 ----LALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASL 352
L L QV+ +DST YL+ GD W+AVGWS+DV+P + R + V+P+SG ++
Sbjct: 229 LEAELKALNQQVKFYDSTTYLEPLITGDTWLAVGWSNDVIPLLSRYPKLTAVIPQSGTAI 288
Query: 353 WADLWAIPAASRLETKQIGGQVRGPSPLIHQWIEFCLQ----------TARALPFKQEVI 402
WADLW PA G R L QWI+FC Q T P + ++
Sbjct: 289 WADLWVSPA---------GVDKRA---LASQWIDFCWQPNIAKKIAVLTKTNSPIAKNIV 336
Query: 403 PGASPSALESTLVKLPE 419
LE+ L+ PE
Sbjct: 337 AADIQKQLENLLLTNPE 353
>gi|411118674|ref|ZP_11391054.1| spermidine/putrescine-binding periplasmic protein [Oscillatoriales
cyanobacterium JSC-12]
gi|410710537|gb|EKQ68044.1| spermidine/putrescine-binding periplasmic protein [Oscillatoriales
cyanobacterium JSC-12]
Length = 407
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 93/259 (35%), Positives = 132/259 (50%), Gaps = 34/259 (13%)
Query: 151 WVKDFMRSQGKRLKFQMNLCASIDGIVNNLSTPFNKLSFAIKKRFIEPIAEAEDQDWFKR 210
W+ D++ G R K + + N ++ L AI + I PI + W K
Sbjct: 103 WIPDWVPFLGNRTK---------NKVPNLMTLGDFWLGMAIAQGLISPIDVSSLPTWTKL 153
Query: 211 LSH-KWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWP 269
++K + N G++DP G+IWA PYR GT I Y++ F+ NL P DW D W
Sbjct: 154 AQFPQFKQLVTRNQQGQLDPDGQIWALPYRIGTTVIAYRRDIFEQRNLQPPTDWSDLWRK 213
Query: 270 ELAGRISMVNSPREVIVAGGKI--------------AVQQNLALLANQVRLFDSTHYLKA 315
+L RI+++N+PREVI K +QQ L LL QV+ + ST YL+
Sbjct: 214 DLRRRIALLNNPREVIGLTLKKLGKSYNTEDLASVPTLQQELNLLQEQVKYYSSTSYLQP 273
Query: 316 FGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGQVR 375
+ DVW+AVGWS+DVLP ++R +A + P+SG +L ADLW PA +
Sbjct: 274 LLLDDVWLAVGWSTDVLPLMQRSRQIAAIAPRSGTALSADLWVHPAMTSTAL-------- 325
Query: 376 GPSPLIHQWIEFCLQTARA 394
P+ + QWIEFC QT A
Sbjct: 326 -PAAAL-QWIEFCWQTKIA 342
>gi|282898041|ref|ZP_06306036.1| periplasmic polyamine-binding protein of ABC transporter
[Raphidiopsis brookii D9]
gi|281197185|gb|EFA72086.1| periplasmic polyamine-binding protein of ABC transporter
[Raphidiopsis brookii D9]
Length = 275
Score = 148 bits (373), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 80/215 (37%), Positives = 119/215 (55%), Gaps = 24/215 (11%)
Query: 191 IKKRFIEPIAEAEDQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIGYKKS 250
+ K+ I+P+ + + W L KW+ ++ +D G D +GK+W APYRWG + Y +
Sbjct: 1 MSKKLIQPLPIKKSKQW-SSLQEKWQQLVKRDDQGNWDSQGKVWGAPYRWGNTVLVYNQK 59
Query: 251 KFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVI-VAGGKIAVQQN------------- 296
+ QN N PI DW D W +L RIS+ N PREVI + K+ N
Sbjct: 60 QLQNFNWQPI-DWSDLWRSDLRSRISLPNHPREVIGLVLKKLGRSYNTVNPVEIPNLKIE 118
Query: 297 LALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADL 356
L L QV+ ++ST+YL+ GD W+AVGWS+D++P + R + V+P+SG ++WAD+
Sbjct: 119 LESLNQQVKFYESTNYLEPLITGDTWLAVGWSNDIIPILSRYPQLRAVIPQSGTAIWADI 178
Query: 357 WAIPAASRL-ETKQIGGQVRGPSPLIHQWIEFCLQ 390
W PA + + ET + LI QWI+FC Q
Sbjct: 179 WVQPANTLITETDKTDN-------LILQWIDFCWQ 206
>gi|427706446|ref|YP_007048823.1| extracellular solute-binding protein [Nostoc sp. PCC 7107]
gi|427358951|gb|AFY41673.1| extracellular solute-binding protein [Nostoc sp. PCC 7107]
Length = 386
Score = 148 bits (373), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 81/220 (36%), Positives = 120/220 (54%), Gaps = 29/220 (13%)
Query: 187 LSFAIKKRFIEPIAEAEDQ--DWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMA 244
L AI+++ I+P+ AE Q ++ +L +W+ + ND G +DP+GK+WAAPYRWG+
Sbjct: 112 LKSAIEQKLIQPLEAAEVQKLQYWSKLDERWRQLVTRNDQGILDPQGKVWAAPYRWGSTV 171
Query: 245 IGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVI----VAGGKIAVQQNLALL 300
I Y + KF+ P +DW D W L IS++++PREVI GK +NL +
Sbjct: 172 IVYDRHKFRELGWQP-QDWSDLWRDGLRSHISLLDNPREVIGLVLKKFGKSYNTENLDTV 230
Query: 301 AN----------QVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGA 350
N QV+ + S YL+ GD W+AVGWSSDVLP + R + V+P+SG
Sbjct: 231 PNLEKELQTLNQQVKFYSSNTYLEPLVTGDTWLAVGWSSDVLPLLSRYPQLNAVIPQSGT 290
Query: 351 SLWADLWAIPAASRLETKQIGGQVRGPSPLIHQWIEFCLQ 390
++WADLW P + + + +WI+FC Q
Sbjct: 291 AIWADLWVRPTKA------------SKNDISSKWIDFCWQ 318
>gi|390439185|ref|ZP_10227598.1| Genome sequencing data, contig C304 [Microcystis sp. T1-4]
gi|389837404|emb|CCI31722.1| Genome sequencing data, contig C304 [Microcystis sp. T1-4]
Length = 382
Score = 148 bits (373), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 116/222 (52%), Gaps = 28/222 (12%)
Query: 187 LSFAIKKRFIEPIAEAEDQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIG 246
L AI I+P+ ++ +W K L +W+ + N G+ GK+W APYRWG I
Sbjct: 109 LGKAITNGLIQPLDTSQLSNWSK-LPPRWQENMTRNAQGQPQTEGKVWGAPYRWGMTVIA 167
Query: 247 YKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVIVAGGK--------------IA 292
Y + KF + P +DW D W PEL G+I+++++ REVI K
Sbjct: 168 YNEEKFAQFDWRP-QDWSDLWRPELTGKIALIDNRREVIGLTLKKLGYSYNSSDLKQVTG 226
Query: 293 VQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASL 352
++ L L QV+ + S +YL+ +GD+W++VGWS+D+LP R + VVVP SG SL
Sbjct: 227 LKDELFALQKQVKFYSSQYYLQPLILGDIWLSVGWSNDILPVSDRYKKIKVVVPNSGTSL 286
Query: 353 WADLWAIPAASRLETKQIGGQVRGPSPLIHQWIEFCLQTARA 394
W+D+W P + P+ L+ QWI+FC Q A
Sbjct: 287 WSDVWVKPVLTT------------PNSLVQQWIDFCWQPESA 316
>gi|218248017|ref|YP_002373388.1| periplasmic polyamine-binding protein [Cyanothece sp. PCC 8801]
gi|218168495|gb|ACK67232.1| periplasmic polyamine-binding protein [Cyanothece sp. PCC 8801]
Length = 391
Score = 148 bits (373), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 82/218 (37%), Positives = 116/218 (53%), Gaps = 24/218 (11%)
Query: 187 LSFAIKKRFIEPIAEAEDQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIG 246
L+ AI+ IEP+ W K L +W+ ++ + G + P+G+IW APYRWGT I
Sbjct: 113 LAQAIQAELIEPLPLEVIPTWSK-LPSRWQGLVKRDSKGNLSPQGQIWGAPYRWGTTLIA 171
Query: 247 YKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVI-VAGGKIAVQQN--------- 296
Y +F+ P +DW D W EL RI++V+ PREVI + K+ N
Sbjct: 172 YDSHRFEKLGWTP-KDWSDLWREELRDRIALVDQPREVIGLTLKKLGYSYNTTDLSQVSS 230
Query: 297 ----LALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASL 352
L L QV+ + S HYL+ +GD W++VGWSSD++P V N+ VVP SG +L
Sbjct: 231 LTSELLALHKQVKYYSSDHYLQPLVVGDAWLSVGWSSDIIPLVNSNRNIKAVVPASGTAL 290
Query: 353 WADLWAIPAASRLETKQIGGQVRGPSPLIHQWIEFCLQ 390
W+D+W P + ETK S L QW++FC Q
Sbjct: 291 WSDVWVNPKVKQGETKL--------SELTKQWLDFCWQ 320
>gi|257060659|ref|YP_003138547.1| hypothetical protein Cyan8802_2862 [Cyanothece sp. PCC 8802]
gi|256590825|gb|ACV01712.1| conserved hypothetical protein [Cyanothece sp. PCC 8802]
Length = 391
Score = 147 bits (372), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 82/218 (37%), Positives = 116/218 (53%), Gaps = 24/218 (11%)
Query: 187 LSFAIKKRFIEPIAEAEDQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIG 246
LS AI+ IEP+ W K L +W+ ++ + G + P+G+IW APYRWGT I
Sbjct: 113 LSQAIQAELIEPLPLEVIPTWSK-LPSRWQGLVKRDSKGNLSPQGQIWGAPYRWGTTLIA 171
Query: 247 YKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVI-VAGGKIAVQQN--------- 296
Y +F+ P +DW D W EL RI++V+ PREVI + K+ N
Sbjct: 172 YDSHRFEKLGWTP-KDWSDLWREELRDRIALVDQPREVIGLTLKKLGYSYNTTDLSQVSS 230
Query: 297 ----LALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASL 352
L L QV+ + S HYL+ +GD W++VGWSSD++P V N+ VVP SG +L
Sbjct: 231 LTSELLALHKQVKYYSSDHYLQPLVVGDAWLSVGWSSDIIPLVNSNRNIKAVVPASGTAL 290
Query: 353 WADLWAIPAASRLETKQIGGQVRGPSPLIHQWIEFCLQ 390
W+D+W P + +TK S L QW++FC Q
Sbjct: 291 WSDVWVNPKVKQGDTKL--------SELTKQWLDFCWQ 320
>gi|428775058|ref|YP_007166845.1| periplasmic polyamine-binding protein [Halothece sp. PCC 7418]
gi|428689337|gb|AFZ42631.1| periplasmic polyamine-binding protein [Halothece sp. PCC 7418]
Length = 372
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 87/249 (34%), Positives = 120/249 (48%), Gaps = 27/249 (10%)
Query: 187 LSFAIKKRFIEPIAEAEDQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIG 246
L AI + I+P+ +W ++L W+ ++ + G + P GKIW APYRWG I
Sbjct: 94 LEEAIAENLIQPLDLTSVDNW-RKLPSVWQRLVQRDAQGNLAPNGKIWGAPYRWGNTVIA 152
Query: 247 YKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVI-VAGGKIAVQQN--------- 296
Y+ +F+ PI DWKD W EL R+S++N PREVI K+ N
Sbjct: 153 YRADQFREAGYEPITDWKDLWREELRDRVSLLNQPREVIGFTLKKLGQSYNTSDLEQVPN 212
Query: 297 ----LALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASL 352
LA L QV+ + S YL+ + D WVAVGWSSD+L R ++ V+P+SG SL
Sbjct: 213 LKTELATLHQQVKFYSSQAYLQPLVLEDTWVAVGWSSDILQLQTRYPDLTTVIPESGTSL 272
Query: 353 WADLWAIPAASRLETKQIGGQVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALES 412
WAD+W P S + QWI FC + A +SP L +
Sbjct: 273 WADVWVQPTGK-----------PSLSEAMLQWINFCWEEQAATQIGL-FTNASSPILLNT 320
Query: 413 TLVKLPEEL 421
+LPE L
Sbjct: 321 KTDQLPESL 329
>gi|282899638|ref|ZP_06307602.1| periplasmic polyamine-binding protein of ABC transporter
[Cylindrospermopsis raciborskii CS-505]
gi|281195517|gb|EFA70450.1| periplasmic polyamine-binding protein of ABC transporter
[Cylindrospermopsis raciborskii CS-505]
Length = 394
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 79/215 (36%), Positives = 117/215 (54%), Gaps = 24/215 (11%)
Query: 190 AIKKRFIEPIAEAEDQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIGYKK 249
AI+++ I P+ + + W L KW+ ++ +D G D +G++W APYRWG + Y +
Sbjct: 121 AIEQKLIRPLPIKKSKQW-SSLQEKWQQLVKRDDQGNWDSQGEVWGAPYRWGNTVLVYNQ 179
Query: 250 SKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVI-------------VAGGKIA-VQQ 295
+ Q N P DW D W +L RIS+ N PREVI V KI+ +
Sbjct: 180 KQLQKFNWQP-RDWGDLWRSDLRSRISLPNHPREVIGLVLKKLGRSYNTVNPVKISNLNI 238
Query: 296 NLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWAD 355
L L QV+ +DST+YL+ GD W+AVGWS+D++P + R + V+P+SG ++WAD
Sbjct: 239 ELESLNQQVKFYDSTNYLEPLITGDTWLAVGWSNDIIPILSRYPQLRAVIPQSGTAIWAD 298
Query: 356 LWAIPAASRLETKQIGGQVRGPSPLIHQWIEFCLQ 390
LW PA + + + LI QWI+FC Q
Sbjct: 299 LWVQPANTLMTEE--------TDNLISQWIDFCWQ 325
>gi|119490051|ref|ZP_01622675.1| periplasmic polyamine-binding protein of ABC transporter [Lyngbya
sp. PCC 8106]
gi|119454203|gb|EAW35355.1| periplasmic polyamine-binding protein of ABC transporter [Lyngbya
sp. PCC 8106]
Length = 357
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 81/257 (31%), Positives = 130/257 (50%), Gaps = 35/257 (13%)
Query: 187 LSFAIKKRFIEPIAEAEDQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIG 246
L+ AI+++ ++P+ Q W +L +W+ + N G +DP+G++WAAPYRWGT AI
Sbjct: 77 LTQAIQQQLVQPLDPQVWQRW-NQLPPQWQALVTRNSQGMLDPQGQVWAAPYRWGTTAIA 135
Query: 247 YKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVIVAGGK--------------IA 292
Y++ +F+ P +DW D W ++ +IS++N+PRE I K +
Sbjct: 136 YRREQFETLGWTP-QDWGDLWREDIRNQISVLNNPRETIGLILKKLGSSYNITDLDLVVD 194
Query: 293 VQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASL 352
++ L ++L+DS YLK GD W+AVGWS+D R N+ VV+P SG +L
Sbjct: 195 LEDEFRQLHRNIKLYDSNTYLKPLITGDTWLAVGWSTDFSEKFCRQHNIGVVIPTSGTAL 254
Query: 353 WADLWAIPAASRLETKQIGGQVRGPSPLIHQWIEFC----------LQTARALPFKQEVI 402
WAD+W P + + + PL QWI+FC + T P ++
Sbjct: 255 WADVWVQPTSEKPISN---------LPLAQQWIDFCWKPEIATQMSILTGTTSPIVNQLQ 305
Query: 403 PGASPSALESTLVKLPE 419
P P L++ + P+
Sbjct: 306 PSELPETLQNNPLLFPK 322
>gi|186683650|ref|YP_001866846.1| extracellular solute-binding protein [Nostoc punctiforme PCC 73102]
gi|186466102|gb|ACC81903.1| extracellular solute-binding protein, family 1 [Nostoc punctiforme
PCC 73102]
Length = 385
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 82/224 (36%), Positives = 118/224 (52%), Gaps = 29/224 (12%)
Query: 187 LSFAIKKRFIEPIAEAEDQDW--FKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMA 244
L AI ++ I+P+ E + + L KWK + +D G +D +GK+W APYRWGT
Sbjct: 112 LKAAIGQKLIQPLQELQGNQLKQWSTLDEKWKKLVTRDDQGNLDTQGKVWGAPYRWGTTV 171
Query: 245 IGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVI-VAGGKIA----------- 292
I Y + KF+ P +DW D W + RIS++N PREVI + K+
Sbjct: 172 IVYNRDKFRELGWTP-KDWSDLWRDGMQQRISLLNQPREVIGLVLKKLGKSYNTENLDQV 230
Query: 293 --VQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGA 350
+++ L L QV+ + S +YL+ +GD W+AVGWSSDVL + R + V+P+SG
Sbjct: 231 PNLEKELQTLNQQVKFYSSNNYLEPLIMGDTWLAVGWSSDVLQVLGRYPQLGAVIPQSGT 290
Query: 351 SLWADLWAIPAASRLETKQIGGQVRGPSPLIHQWIEFCLQTARA 394
++WADLW PA T L QWI+FC Q + A
Sbjct: 291 AMWADLWVRPAGINKGT------------LSDQWIDFCWQPSIA 322
>gi|414075874|ref|YP_006995192.1| solute-binding protein [Anabaena sp. 90]
gi|413969290|gb|AFW93379.1| solute-binding protein [Anabaena sp. 90]
Length = 376
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 99/300 (33%), Positives = 141/300 (47%), Gaps = 66/300 (22%)
Query: 137 PLRVVSLQNSVPQSWVKDFMRS--QGKRLKFQ-MNLCASIDGIV--------NNLST--- 182
PL V L+NS+P V F ++ QG +LKF +N + ++ NN
Sbjct: 29 PLNVQLLKNSIPGQVVNQFRKTVTQGGKLKFTPVNQLQELFKLLQTWQQPPTNNQQEWTR 88
Query: 183 --PFNK----------------LSFAIKKRFIEPIAEAEDQDWFKRLSHKWKVYLRSNDA 224
PFN+ L AI ++ I+P+A ++ L+ KW+ ++
Sbjct: 89 YLPFNQNQKSPTANLVTLGDYWLQAAIDQKLIQPLATTNIKN-LANLNEKWQQLIKR--- 144
Query: 225 GEIDPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREV 284
D GKIW PYRWG I Y + KFQ P DW D W EL RIS++N PREV
Sbjct: 145 ---DQEGKIWGVPYRWGNTVIIYNQEKFQELGWKPT-DWSDLWRSELQNRISLLNHPREV 200
Query: 285 I-VAGGKI-------------AVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSD 330
I + K+ A++ L L QV+ +DS +YL+ GD W+AVGWS D
Sbjct: 201 IGLVLKKLGKSYNTENIKQISALKPELQALNQQVKFYDSQNYLEPLITGDTWLAVGWSHD 260
Query: 331 VLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGQVRGPSPLIHQWIEFCLQ 390
++P + R A VVP+SG ++W DLW P + L +QW++FCLQ
Sbjct: 261 IIPVISRYQKFAAVVPQSGTAIWTDLWVSPTGVSNDG------------LAYQWLDFCLQ 308
>gi|307153205|ref|YP_003888589.1| extracellular solute-binding protein [Cyanothece sp. PCC 7822]
gi|306983433|gb|ADN15314.1| extracellular solute-binding protein family 1 [Cyanothece sp. PCC
7822]
Length = 383
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 101/327 (30%), Positives = 149/327 (45%), Gaps = 59/327 (18%)
Query: 138 LRVVSLQNSVPQSWVKDFMRSQGKRLKFQMN-------------LCASIDGIVNNLSTPF 184
RV+ L NS+P + DF S + F + + N PF
Sbjct: 30 FRVLLLDNSIPSQLIGDFRSSISSKSIFTLESQLKTLLKLLQTWQAKDLSKPNKNSGLPF 89
Query: 185 -NK---------------LSFAIKKRFIEPIAEAEDQDWFKRLSHKWKVYLRSNDAGEID 228
NK L+ AI+++ I P+ D W ++L +W+ +R ++ G +
Sbjct: 90 INKKPAPVPDLVTLGDSWLATAIEQKLISPLEG--DLKW-QQLPPRWQEIVRRDEQGMVS 146
Query: 229 PRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVI-VA 287
+GKIW APYRWGT I Y+K + P +DW D W ++ RIS+++ PREVI +
Sbjct: 147 QQGKIWGAPYRWGTTMIAYRKDNLKKLGWEP-KDWGDLWREDVRNRISLLDQPREVIGLT 205
Query: 288 GGKIAVQQN-------------LALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPA 334
K+ N L L Q + + S HYL+ +GD W+AVGWS +++P
Sbjct: 206 LKKLGYSYNSDNINQIPNLKSDLVALNKQAKFYSSDHYLEPLILGDTWLAVGWSHEIIPL 265
Query: 335 VKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGQVRGPSPLIHQWIEFCLQTARA 394
+K ++A VVP+SG +LWAD+W PAA V PS + WI FC Q+ A
Sbjct: 266 LKNYRDIAAVVPQSGTALWADIWVKPAA-----------VIKPSKFVQDWINFCWQSKSA 314
Query: 395 LPFKQEVIPGASPSALESTLVKLPEEL 421
SP LE LP+ +
Sbjct: 315 KEISL-FTDAVSPVILELAPENLPQAI 340
>gi|428778824|ref|YP_007170610.1| spermidine/putrescine-binding periplasmic protein [Dactylococcopsis
salina PCC 8305]
gi|428693103|gb|AFZ49253.1| spermidine/putrescine-binding periplasmic protein [Dactylococcopsis
salina PCC 8305]
Length = 369
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 78/217 (35%), Positives = 112/217 (51%), Gaps = 26/217 (11%)
Query: 187 LSFAIKKRFIEPIAEAEDQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIG 246
L AIKK I+P+ ++W + L W+ ++ + G +D RGK+W PYRWG+ I
Sbjct: 94 LEKAIKKELIQPLTVNSLRNW-EMLPASWQKLVQRDRNGNLDARGKVWGIPYRWGSTVIA 152
Query: 247 YKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVI-VAGGKIAVQQN--------- 296
Y++ +F+ P DW D W EL RIS++N PREVI + K+ N
Sbjct: 153 YREDRFRQAGYDPPTDWGDLWREELRDRISLLNQPREVIGLTLKKLGFSYNTPDLDSISD 212
Query: 297 ----LALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASL 352
L L QV+ + S YL+ + D WVAVGWS+D+L R ++ ++P+SG +L
Sbjct: 213 LKTALKTLNQQVKFYSSQSYLQPLILEDTWVAVGWSNDLLQLRTRYPDIKTIIPRSGTAL 272
Query: 353 WADLWAIPAASRLETKQIGGQVRGPSPLIHQWIEFCL 389
WADLW P + S I QWI+FCL
Sbjct: 273 WADLWVNPTGN-----------EAISEAILQWIDFCL 298
>gi|427711348|ref|YP_007059972.1| spermidine/putrescine-binding periplasmic protein [Synechococcus
sp. PCC 6312]
gi|427375477|gb|AFY59429.1| spermidine/putrescine-binding periplasmic protein [Synechococcus
sp. PCC 6312]
Length = 354
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 86/248 (34%), Positives = 129/248 (52%), Gaps = 37/248 (14%)
Query: 138 LRVVSLQNSVPQSWVKDFMRSQGKRLKFQMNLCASIDGIVNNLS--TPFNK--------L 187
L V +L+N++P + F R + ++ + + I N L TP + L
Sbjct: 30 LTVTALRNTLPPQLINRF-RQEFPAQALRLQIKTTPQDIFNQLEADTPTTQWLSLGDAWL 88
Query: 188 SFAIKKRFIEPIAEAEDQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIGY 247
AI+ + IEP+ + L +W+ ++ N+ GE DP+GKIW PYRWGT + Y
Sbjct: 89 KLAIETKTIEPLRTLPH---WANLEPRWQQLVQRNERGEPDPQGKIWGLPYRWGTTVMAY 145
Query: 248 KKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVI------------------VAGG 289
+ Q P +DW+D W PEL ++S++N PREVI V+G
Sbjct: 146 RADLIQPTGWWP-QDWEDLWKPELTQKLSLLNQPREVIGLVLKKLGQSYNTADINQVSGL 204
Query: 290 KIAVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSG 349
K A+++ L Q R F ST YL++ +GD W+A WS+D+LP + R SN+ +VPKSG
Sbjct: 205 KPALEE----LRQQTRFFASTDYLQSLIMGDTWIAQAWSTDILPILNRYSNIKAIVPKSG 260
Query: 350 ASLWADLW 357
+LWAD W
Sbjct: 261 TALWADCW 268
>gi|218438983|ref|YP_002377312.1| periplasmic polyamine-binding protein [Cyanothece sp. PCC 7424]
gi|218171711|gb|ACK70444.1| periplasmic polyamine-binding protein [Cyanothece sp. PCC 7424]
Length = 384
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 85/250 (34%), Positives = 130/250 (52%), Gaps = 28/250 (11%)
Query: 187 LSFAIKKRFIEPIAEAEDQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIG 246
L AI+++ I P+ E W +L +W+ ++ N G +D +G+IW APYRWGT I
Sbjct: 108 LKGAIEQQLISPLDINELSQW-PQLPPRWQEIVQRNQLGMVDKQGQIWGAPYRWGTTMIV 166
Query: 247 YKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVIVAG----GKIAVQQNLALLAN 302
Y+ + + P DW D W EL GRIS++N PREVI G QN++L+ N
Sbjct: 167 YRSDILKKFDWQPT-DWSDLWREELQGRISLLNQPREVIGLTLKKLGYSYNTQNISLIPN 225
Query: 303 ----------QVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASL 352
Q +++ S +YL+ +GD+W+AVGWS++++P + R ++ +VP+SG +L
Sbjct: 226 LKSELFALNKQTKIYSSNYYLQPLILGDIWLAVGWSNEIIPLLSRRRDLKAIVPQSGTAL 285
Query: 353 WADLWAIPAASRLETKQIGGQVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALES 412
WAD+W P + S L +WI FC Q A+ SP L+
Sbjct: 286 WADVWVKPTSD-----------VKLSNLAQEWINFCWQPT-AVQQISLYTDAVSPLILDQ 333
Query: 413 TLVKLPEELL 422
KLP+ +L
Sbjct: 334 NSEKLPKPIL 343
>gi|427717210|ref|YP_007065204.1| extracellular solute-binding protein [Calothrix sp. PCC 7507]
gi|427349646|gb|AFY32370.1| extracellular solute-binding protein family 1 [Calothrix sp. PCC
7507]
Length = 376
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 78/218 (35%), Positives = 116/218 (53%), Gaps = 28/218 (12%)
Query: 187 LSFAIKKRFIEPIAEAEDQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIG 246
L AI+++ I+P+ + + W L +W + ND G +D +GK+WAAPYRWG+ I
Sbjct: 106 LKAAIEQKLIQPLEVKQVKQW-SALDERWHKLVTRNDQGILDAQGKVWAAPYRWGSTVIV 164
Query: 247 YKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVI-VAGGKIA------------- 292
Y + KF+ P DW D W E+ RIS++N PREVI + K+
Sbjct: 165 YNRDKFKELGWTP-SDWGDLWREEVRSRISLLNQPREVIGLTLKKLGKSYNTENLDQVPD 223
Query: 293 VQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASL 352
+++ L L QV+ + ST YL+ D W+AV WS DV+P + R +A ++P+SG ++
Sbjct: 224 LEKELRRLNQQVKFYASTTYLEPLITEDTWLAVAWSDDVMPVLARYPQLAAIIPQSGTAV 283
Query: 353 WADLWAIPAASRLETKQIGGQVRGPSPLIHQWIEFCLQ 390
W DLW PA+ +T L QWI+FC Q
Sbjct: 284 WVDLWVRPASVSKDT------------LSDQWIDFCWQ 309
>gi|67921536|ref|ZP_00515054.1| Twin-arginine translocation pathway signal [Crocosphaera watsonii
WH 8501]
gi|416384741|ref|ZP_11684684.1| periplasmic polyamine-binding protein of ABC transporter
[Crocosphaera watsonii WH 0003]
gi|67856648|gb|EAM51889.1| Twin-arginine translocation pathway signal [Crocosphaera watsonii
WH 8501]
gi|357264996|gb|EHJ13812.1| periplasmic polyamine-binding protein of ABC transporter
[Crocosphaera watsonii WH 0003]
Length = 387
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 81/222 (36%), Positives = 118/222 (53%), Gaps = 27/222 (12%)
Query: 187 LSFAIKKRFIEPIAEAEDQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIG 246
L AI+K I+P+ AE ++W + L +WK ++ + G + G IW APYRWGT I
Sbjct: 113 LGEAIEKELIDPLDIAEIENW-QTLPSRWKNLVKRDRQGNLQENGLIWGAPYRWGTTLIA 171
Query: 247 YKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVIVAG----GKIAVQQNLAL--- 299
Y+ K + P +DW D W L+ RISMVN PRE+I GK +NL
Sbjct: 172 YRSDKL---DWQP-QDWSDLWDERLSDRISMVNQPREIIGLTLKQLGKSYNTENLEEVPE 227
Query: 300 -------LANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASL 352
L +V+ + HYL+ +GDVWV+VGWS++++P + + N+ VVP SG ++
Sbjct: 228 LKSELLNLNKRVKYYSDQHYLQPLVVGDVWVSVGWSNEIIPLMAKSPNIKAVVPTSGTAI 287
Query: 353 WADLWAIPAASRLETKQIGGQVRGPSPLIHQWIEFCLQTARA 394
W+D+W P A ET+ S + QW+ FC Q A
Sbjct: 288 WSDIWVKPKAKETETEL--------SEIAKQWLNFCWQPQAA 321
>gi|428311092|ref|YP_007122069.1| spermidine/putrescine-binding periplasmic protein [Microcoleus sp.
PCC 7113]
gi|428252704|gb|AFZ18663.1| spermidine/putrescine-binding periplasmic protein [Microcoleus sp.
PCC 7113]
Length = 432
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 92/263 (34%), Positives = 131/263 (49%), Gaps = 29/263 (11%)
Query: 187 LSFAIKKRFIEPIAEAEDQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIG 246
L AI + I+P+ E + W K L +W+ + N G + G++W APYRWGT I
Sbjct: 136 LESAIGQGLIKPLEVQELEGW-KNLPSRWQEIVTRNQQGLLAKNGQVWGAPYRWGTTVIV 194
Query: 247 YKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVI-VAGGKIAVQQN--------- 296
Y++ KF+ P +DW D W PEL RIS+++ PREVI + K+ N
Sbjct: 195 YRRDKFEELGWTP-KDWSDLWRPELRDRISLLDQPREVIGLTLKKLGFSYNHKNLSQVPN 253
Query: 297 ----LALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASL 352
L L QV+ + S YL+ +GD W+A+GWS+DVL + +VP SG +L
Sbjct: 254 LKEELLKLHQQVKYYSSNQYLEPLLLGDTWLALGWSTDVLSVQSGYRQIDSIVPLSGTAL 313
Query: 353 WADLWAIPA--ASRLETKQIGGQVRGPS------PLIHQWIEFCLQTARALPFKQEVI-- 402
WAD+W PA A+R T + PL QWIEFC + LP +Q +
Sbjct: 314 WADVWVQPAPIAARSNTVKTSASSTPQQDSSVNMPLTKQWIEFCW---KPLPAQQISVLS 370
Query: 403 PGASPSALESTLVKLPEELLKGK 425
ASP + KLP+ L + +
Sbjct: 371 HAASPMFADVEPTKLPKTLRENR 393
>gi|434384916|ref|YP_007095527.1| spermidine/putrescine-binding periplasmic protein [Chamaesiphon
minutus PCC 6605]
gi|428015906|gb|AFY92000.1| spermidine/putrescine-binding periplasmic protein [Chamaesiphon
minutus PCC 6605]
Length = 403
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 97/342 (28%), Positives = 153/342 (44%), Gaps = 60/342 (17%)
Query: 138 LRVVSLQNSVPQSWVKDFMRS-QGKRLKFQMNLCASIDGIVNNLSTPFNK---------- 186
LR+++L+NS+PQ V +F +S + + L I+ L +N
Sbjct: 30 LRLLALKNSLPQQLVNEFNKSIESTNASVEFVLETQFKDILTQLQEWYNSGAAEAKGLKI 89
Query: 187 ----------------------LSFAIKKRFIEPIAEAEDQDWFKRLSHKWKVYLRSNDA 224
LS AI+++ I+PI +W ++L +W+ + ++
Sbjct: 90 PLVPPAQGAEYIPNLTSLGDAWLSRAIEQKLIQPIDTNNLTNW-RKLDSRWRELAQRDER 148
Query: 225 GEIDPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREV 284
G G+IW PYRWGT I Y++ K N+ +DW D W P+L RIS+++ REV
Sbjct: 149 GNSSSTGQIWGVPYRWGTTVIIYRRDKLTEANIPLPQDWADLWNPQLRQRISLLDRSREV 208
Query: 285 IVAGGK--------------IAVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSD 330
I K + +Q LA L QV+ + + HYL+ IGD WVAVGWS D
Sbjct: 209 IGLTLKKLGYSYNAADLDRVLNLQTELAKLHQQVKFYSADHYLQPLVIGDTWVAVGWSLD 268
Query: 331 VLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGQVRGPS--PLIHQWIEFC 388
+++ + VVP+SG ++ ADLW P+ S + + + L ++WI+ C
Sbjct: 269 ASELIQKNPQIGAVVPRSGTAISADLWVQPSLSPKLSPANRALLSNSNRLKLSNKWIDHC 328
Query: 389 LQ----------TARALPFKQEVIPGASPSALESTLVKLPEE 420
LQ T A P + P P + L+ LP +
Sbjct: 329 LQPQSSNQISVLTPGAAPLLTNLNPNDIPPDVRKNLLTLPSK 370
>gi|443329204|ref|ZP_21057792.1| spermidine/putrescine-binding periplasmic protein [Xenococcus sp.
PCC 7305]
gi|442791149|gb|ELS00648.1| spermidine/putrescine-binding periplasmic protein [Xenococcus sp.
PCC 7305]
Length = 393
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 87/234 (37%), Positives = 120/234 (51%), Gaps = 36/234 (15%)
Query: 227 IDPR--------GKIWAAPYRWGTMAIGYKKSKFQNHNLAPIE-----DWKDPWWPELAG 273
+DPR GKI+AAPYRWG I Y+K K Q N +E DW D W PELAG
Sbjct: 133 LDPRFQKLVTKDGKIYAAPYRWGNTVIAYRKDKLQEFNKDRVEKLEITDWADLWRPELAG 192
Query: 274 RISMVNSPREVIVAGGK--------------IAVQQNLALLANQVRLFDSTHYLKAFGIG 319
+IS++++ RE+I K ++ LA L QV+ + ST YL+ +G
Sbjct: 193 QISLLDNYREIIGLTLKKLGHSYNSSNLTAITNLESELATLHQQVKFYSSTKYLQPLALG 252
Query: 320 DVWVAVGWSSDVLPAVKRM-SNVAVVVPKSGASLWADLWAIPAASRLETKQIGGQVRGPS 378
D+W AVGWS+D+LP V+R + +VVP SG SLWADLW P IG +V
Sbjct: 253 DLWAAVGWSTDILPLVRRYPDKIGMVVPASGTSLWADLWVQPTVD----GSIGDRVERR- 307
Query: 379 PLIHQWIEFCLQTARALPFKQEVIPGASPSALESTLVKLPEELLKGKPSVDTNL 432
+ WI+FC Q + A G SP + V+L +EL + + ++L
Sbjct: 308 --LASWIDFCWQDSSASTL-MLFTNGISPILNQENQVELTKELKNNQDFIQSSL 358
>gi|172036028|ref|YP_001802529.1| periplasmic polyamine-binding protein of ABC transporter
[Cyanothece sp. ATCC 51142]
gi|354552834|ref|ZP_08972141.1| periplasmic polyamine-binding protein of ABC transporter
[Cyanothece sp. ATCC 51472]
gi|171697482|gb|ACB50463.1| periplasmic polyamine-binding protein of ABC transporter
[Cyanothece sp. ATCC 51142]
gi|353554664|gb|EHC24053.1| periplasmic polyamine-binding protein of ABC transporter
[Cyanothece sp. ATCC 51472]
Length = 390
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 79/222 (35%), Positives = 117/222 (52%), Gaps = 27/222 (12%)
Query: 187 LSFAIKKRFIEPIAEAEDQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIG 246
L+ AIKK IEP+ + ++W +L +W+ ++ + G++ G IW APYRWGT I
Sbjct: 113 LADAIKKELIEPLNLTQIENW-NQLPSRWQTLVKRDQQGQLQDNGLIWGAPYRWGTTLIA 171
Query: 247 YKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVI-VAGGKIAVQQN--------- 296
Y+ K + P +DW D W L+ RIS+V+ REV+ + K+ N
Sbjct: 172 YRSDKL---DWQP-QDWSDLWDQRLSDRISVVDQYREVMGLTLKKLGQSYNTEKLDQVPQ 227
Query: 297 ----LALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASL 352
L L QV+ + S HYL+ +GDVWV+VGWS++++P V + N+ VVP SG S+
Sbjct: 228 LKTELLALNQQVKYYSSDHYLQPLVVGDVWVSVGWSNEIIPLVTKNRNIKAVVPTSGTSI 287
Query: 353 WADLWAIPAASRLETKQIGGQVRGPSPLIHQWIEFCLQTARA 394
W+D+W P A + K S QW+ FC Q A
Sbjct: 288 WSDVWVKPKAKESQNKL--------SETAKQWLNFCWQPQAA 321
>gi|332706228|ref|ZP_08426297.1| spermidine/putrescine-binding periplasmic protein [Moorea producens
3L]
gi|332355065|gb|EGJ34536.1| spermidine/putrescine-binding periplasmic protein [Moorea producens
3L]
Length = 396
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 88/249 (35%), Positives = 127/249 (51%), Gaps = 19/249 (7%)
Query: 187 LSFAIKKRFIEPIAEAEDQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIG 246
L AI++ I+P+ W K+L +++ ++ + G++D GK+W APYRWG I
Sbjct: 113 LKSAIEQELIQPLNIETLPGW-KQLPPEYQKLVKRDQTGQLDNSGKVWGAPYRWGATVIA 171
Query: 247 YKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVIVAG----GKIAVQQNL----- 297
Y++ KF+ P DW D W L RIS++N PREVI G QQ+L
Sbjct: 172 YRRDKFKALGWTPT-DWSDLWRESLRDRISVLNHPREVIGLTLKNLGLSYNQQDLNQVKD 230
Query: 298 ---AL--LANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASL 352
AL LA QV+ + S HYLK +GD WVAVGWS+D+L R + VVP+SG +L
Sbjct: 231 LKPALRQLAKQVKFYSSDHYLKPLVLGDTWVAVGWSTDILALRTRDRQIEAVVPQSGTAL 290
Query: 353 WADLWAIPAASRLETKQIGGQVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALES 412
W+D+W P + + +WIEFC + A + ASP L+
Sbjct: 291 WSDVWVKPVSVSSASDSSESNSESDL--SKKWIEFCWDSKSAKQISL-LTNAASPILLKI 347
Query: 413 TLVKLPEEL 421
KLP+++
Sbjct: 348 PRNKLPQDI 356
>gi|443323260|ref|ZP_21052268.1| spermidine/putrescine-binding periplasmic protein [Gloeocapsa sp.
PCC 73106]
gi|442786998|gb|ELR96723.1| spermidine/putrescine-binding periplasmic protein [Gloeocapsa sp.
PCC 73106]
Length = 374
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 78/218 (35%), Positives = 112/218 (51%), Gaps = 24/218 (11%)
Query: 187 LSFAIKKRFIEPIAEAEDQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIG 246
L AI ++ I+P+ E +W ++L ++ ++ N G +DP+G+IW APYRWGT I
Sbjct: 87 LEQAIPQKLIQPLVIEELSNW-QQLPSAYQELVKRNSQGYVDPQGEIWGAPYRWGTTMIA 145
Query: 247 YKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVIVAG----GKIAVQQNLAL--- 299
Y+ + + + P +DW D W L RIS+ REVI G Q NLA
Sbjct: 146 YRSDRLKEVGIVP-QDWSDLWQSALKERISLPAHSREVIGLTLKKLGYSYNQTNLAAIPE 204
Query: 300 -------LANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASL 352
L QV+ + S YL+ GD W+AVGWS+D++P SN+ V+P SG SL
Sbjct: 205 LPKELERLNQQVKFYSSDAYLQPLIKGDTWLAVGWSTDIIPVANNYSNIEAVIPPSGTSL 264
Query: 353 WADLWAIPAASRLETKQIGGQVRGPSPLIHQWIEFCLQ 390
W DLW A ++ ++ LI WI+FC Q
Sbjct: 265 WVDLWVKSALTQPTAPEV--------ELIKGWIDFCWQ 294
>gi|284929800|ref|YP_003422322.1| spermidine/putrescine-binding periplasmic protein [cyanobacterium
UCYN-A]
gi|284810244|gb|ADB95941.1| spermidine/putrescine-binding periplasmic protein [cyanobacterium
UCYN-A]
Length = 385
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 76/216 (35%), Positives = 114/216 (52%), Gaps = 28/216 (12%)
Query: 187 LSFAIKKRFIEPIAEAEDQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIG 246
L+ AI+K I+PI + +W K S+ W+ + + G + G +W APYRWGT I
Sbjct: 111 LTQAIQKDLIQPITISSWHNWHKLPSY-WQNLVIRDQNGIPNKNGFVWGAPYRWGTTLIA 169
Query: 247 YKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVI-VAGGKIAVQQNLALLAN--- 302
Y+ K I+DW D W P+L RIS+V+ PREVI + K+ N L N
Sbjct: 170 YRADKLD----GEIKDWSDLWDPKLENRISLVDQPREVIGLTLKKLNKSYNTKNLKNIPQ 225
Query: 303 ----------QVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASL 352
QV+ ++S +YL+ +G+VW +VGWS+D++P + R N+ V+P SG SL
Sbjct: 226 LRSELQAFNKQVKYYNSQYYLQPLLMGEVWASVGWSNDIIPILSRNRNIKAVIPSSGTSL 285
Query: 353 WADLWAIPAASRLETKQIGGQVRGPSPLIHQWIEFC 388
W+D+W P + + T S + +WI FC
Sbjct: 286 WSDIWVAPKNNNISTL---------SEIAQRWINFC 312
>gi|16331125|ref|NP_441853.1| spermidine/putrescine-binding periplasmic protein [Synechocystis
sp. PCC 6803]
gi|383322868|ref|YP_005383721.1| spermidine/putrescine-binding periplasmic protein [Synechocystis
sp. PCC 6803 substr. GT-I]
gi|383326037|ref|YP_005386890.1| spermidine/putrescine-binding periplasmic protein [Synechocystis
sp. PCC 6803 substr. PCC-P]
gi|383491921|ref|YP_005409597.1| spermidine/putrescine-binding periplasmic protein [Synechocystis
sp. PCC 6803 substr. PCC-N]
gi|384437189|ref|YP_005651913.1| spermidine/putrescine-binding periplasmic protein [Synechocystis
sp. PCC 6803]
gi|451815282|ref|YP_007451734.1| spermidine/putrescine-binding periplasmic protein [Synechocystis
sp. PCC 6803]
gi|1653619|dbj|BAA18531.1| spermidine/putrescine-binding periplasmic protein [Synechocystis
sp. PCC 6803]
gi|339274221|dbj|BAK50708.1| spermidine/putrescine-binding periplasmic protein [Synechocystis
sp. PCC 6803]
gi|359272187|dbj|BAL29706.1| spermidine/putrescine-binding periplasmic protein [Synechocystis
sp. PCC 6803 substr. GT-I]
gi|359275357|dbj|BAL32875.1| spermidine/putrescine-binding periplasmic protein [Synechocystis
sp. PCC 6803 substr. PCC-N]
gi|359278527|dbj|BAL36044.1| spermidine/putrescine-binding periplasmic protein [Synechocystis
sp. PCC 6803 substr. PCC-P]
gi|407961501|dbj|BAM54741.1| spermidine/putrescine-binding periplasmicprotein [Bacillus subtilis
BEST7613]
gi|451781251|gb|AGF52220.1| spermidine/putrescine-binding periplasmic protein [Synechocystis
sp. PCC 6803]
Length = 384
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 79/218 (36%), Positives = 114/218 (52%), Gaps = 28/218 (12%)
Query: 187 LSFAIKKRFIEPIAEAEDQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIG 246
L IK++ I+P + W L +W++ + ND G D GKIWA PYRWG I
Sbjct: 115 LERVIKEKLIQPFVPDQLSQW-SSLPPRWQLLGQRNDQGLPDQSGKIWAVPYRWGPTMII 173
Query: 247 YKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVI-VAGGKIAVQQN--------- 296
Y++ F + P DW D W PEL RI++V+ PRE I + K+ N
Sbjct: 174 YRQQPFADLGWQPT-DWSDLWRPELKQRIALVDDPREAIGLTLKKLGYSYNVTNPKAVNA 232
Query: 297 ----LALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASL 352
L LA QV+ ++S +YL+A DVW+AVGWS+ ++P ++ S + V+P SG SL
Sbjct: 233 LPSALQELATQVKFYNSKYYLQALLNKDVWLAVGWSNQIIPLLRNQSELRAVIPSSGTSL 292
Query: 353 WADLWAIPAASRLETKQIGGQVRGPSPLIHQWIEFCLQ 390
WADLW +PA +E +I ++W+ F Q
Sbjct: 293 WADLWTMPA--EMEAAEI----------TYEWLNFSAQ 318
>gi|307111783|gb|EFN60017.1| hypothetical protein CHLNCDRAFT_9420, partial [Chlorella
variabilis]
Length = 204
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 74/195 (37%), Positives = 106/195 (54%), Gaps = 20/195 (10%)
Query: 187 LSFAIKKRFIEPIAEAEDQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIG 246
L AI + I+PI +A W+ L +W+ + + AG+ DPRG++WAAPYRWG +
Sbjct: 10 LQRAIAEGLIQPIPDARQYRWWAALYPRWQQLVCRDGAGQPDPRGEVWAAPYRWGATLVA 69
Query: 247 YKKSKF---QNHNLAPIEDWKDPWWPELAGRISMVNSPREVIVAGGK------------- 290
Y++ K API DW D P+L GR++ ++SPR+V+ A K
Sbjct: 70 YRRDKLGRADGGGGAPIRDWSDLLQPQLKGRVAFMDSPRDVVGAALKTLGLGYNSSAADI 129
Query: 291 ----IAVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVP 346
++ Q + VR+F S+ +L+A G GDV VGWS D+LP V R +N+ P
Sbjct: 130 RRCGLSEQDVRTRVQRLVRVFSSSDHLRALGAGDVDAVVGWSDDLLPLVLRTNNLEAAAP 189
Query: 347 KSGASLWADLWAIPA 361
SG SL+AD W IPA
Sbjct: 190 LSGTSLFADCWCIPA 204
>gi|126660470|ref|ZP_01731578.1| periplasmic polyamine-binding protein of ABC transporter
[Cyanothece sp. CCY0110]
gi|126618229|gb|EAZ88990.1| periplasmic polyamine-binding protein of ABC transporter
[Cyanothece sp. CCY0110]
Length = 387
Score = 134 bits (338), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 82/222 (36%), Positives = 117/222 (52%), Gaps = 27/222 (12%)
Query: 187 LSFAIKKRFIEPIAEAEDQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIG 246
L+ AIKK IEP+ + ++W +L +W+ ++ N G++ G IW APYRWGT I
Sbjct: 113 LADAIKKDLIEPLNLTQVENW-DKLPSRWQTLVKRNKQGQLQDNGLIWGAPYRWGTTLIA 171
Query: 247 YKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVIVAG----GKIAVQQNLA---- 298
Y+ K + P +DW D W L+ RISMV+ REVI G +NLA
Sbjct: 172 YRSDKL---DWQP-QDWSDLWDQRLSDRISMVDQYREVIGLTLKYLGHSYNTENLAQVPQ 227
Query: 299 ----LLA--NQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASL 352
LLA QV+ + S HYL+ +GDV V+VGWS++++P + + N+ VVP SG SL
Sbjct: 228 LKTELLALNEQVKYYSSDHYLQPLLVGDVDVSVGWSNEIIPLITKNRNIKAVVPTSGTSL 287
Query: 353 WADLWAIPAASRLETKQIGGQVRGPSPLIHQWIEFCLQTARA 394
W+D+W P + + S QW+ FC Q A
Sbjct: 288 WSDIWVKPKVKEGQNEL--------SETAKQWLNFCWQPQAA 321
>gi|359457473|ref|ZP_09246036.1| ABC transporter periplasmic solute-binding protein [Acaryochloris
sp. CCMEE 5410]
Length = 371
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 79/212 (37%), Positives = 113/212 (53%), Gaps = 31/212 (14%)
Query: 190 AIKKRFIEPIAEAEDQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIGYKK 249
AI++ I+P++ +D + + L+ +W+ +R + G GKIW APYRWG I ++K
Sbjct: 108 AIQQNLIQPLS-VDDLNRWSALAPQWQQLVRRDLQGNPSTEGKIWGAPYRWGATMIAFRK 166
Query: 250 SKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVIVAGGKIAVQ--------------Q 295
KF++ P +DW D W EL G IS+ + PREVI K Q Q
Sbjct: 167 DKFRDLGWQP-QDWSDLWRSELKGHISLPDQPREVIGLTLKKLGQSYNLEDLDTISELPQ 225
Query: 296 NLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWAD 355
L L Q + S+ YL+ +GD W AVGWSSD+LPA+ R ++ V+P SG++LWAD
Sbjct: 226 TLKELNEQTLFYASSQYLEPLILGDTWAAVGWSSDILPALAREPDLDAVLPASGSALWAD 285
Query: 356 LWAIPAASRLETKQIGGQVRGPSPLIHQWIEF 387
LW QV+ PS I+QWI +
Sbjct: 286 LWV--------------QVQ-PSETINQWINY 302
>gi|427419007|ref|ZP_18909190.1| spermidine/putrescine-binding periplasmic protein [Leptolyngbya sp.
PCC 7375]
gi|425761720|gb|EKV02573.1| spermidine/putrescine-binding periplasmic protein [Leptolyngbya sp.
PCC 7375]
Length = 380
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 96/261 (36%), Positives = 124/261 (47%), Gaps = 40/261 (15%)
Query: 179 NLSTPFNKLSFAIKKRFIEPIAEAEDQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPY 238
LS P+ L AI++ I+P+ D L W+ LR + G RGK+WA PY
Sbjct: 107 TLSDPW--LEHAIRQDLIQPLP---DFPLAYALPEPWQKLLRRDREGYSSERGKLWAVPY 161
Query: 239 RWGTMAIGYKKSKFQ-NHNLAPIEDWKDPWWPELAGRISMVNSPREVIVAGGKIA----- 292
R + I Y+K FQ N N PI W D W PELAGRI+M N PR I K
Sbjct: 162 RTQGLMIAYQKPIFQTNTNNKPITKWADLWRPELAGRIAMPNQPRLAIAIVLKALGYSVN 221
Query: 293 ---------VQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAV 343
VQ+ L L QV++FDS YLKA DVW+AVGWS D+L + R +
Sbjct: 222 DEAVLLQDDVQEQLLALYRQVKVFDSQAYLKALVNEDVWLAVGWSGDILATLVRYRRLGA 281
Query: 344 VVPKSGASLWADLWAIPAASRLETKQIGGQVRGPSPLIHQWIEFCLQTARALPFKQEVIP 403
V P+ G L +DLW P ++L + W+EFC Q +P E+
Sbjct: 282 VHPQEGTVLTSDLWVAPTDAKLTEEA------------QAWMEFCWQ----MPIATEISV 325
Query: 404 ---GASPSALESTLVKLPEEL 421
G SPS VK+PE+L
Sbjct: 326 SSYGVSPSFFLPD-VKVPEQL 345
>gi|158338236|ref|YP_001519413.1| ABC transporter periplasmic solute-binding protein [Acaryochloris
marina MBIC11017]
gi|158308477|gb|ABW30094.1| ABC transporter, periplasmic solute-binding protein [Acaryochloris
marina MBIC11017]
Length = 371
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 78/212 (36%), Positives = 112/212 (52%), Gaps = 31/212 (14%)
Query: 190 AIKKRFIEPIAEAEDQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIGYKK 249
AI++ I+P++ A+D + + L+ +W+ +R + G GKIW APYRWG I ++K
Sbjct: 108 AIQQNLIQPLS-ADDLNRWSALAPQWQQLVRRDLQGNPSAEGKIWGAPYRWGATMIAFRK 166
Query: 250 SKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVIVAGGKIAVQ--------------Q 295
KF++ P +DW D W EL IS+++ PREVI K Q Q
Sbjct: 167 DKFRDLGWQP-QDWSDLWRSELKEHISLLDQPREVIGLTLKKLGQSYNLEDLDTISELPQ 225
Query: 296 NLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWAD 355
L L Q + S+ YL+ +GD W AVGWSSD+LP + R ++ V P SG++LWAD
Sbjct: 226 TLKELNEQTLFYASSQYLEPLILGDTWAAVGWSSDILPTLAREPDLEAVFPASGSALWAD 285
Query: 356 LWAIPAASRLETKQIGGQVRGPSPLIHQWIEF 387
LW QV+ PS I+QWI +
Sbjct: 286 LWV--------------QVQ-PSETINQWINY 302
>gi|428297544|ref|YP_007135850.1| extracellular solute-binding protein [Calothrix sp. PCC 6303]
gi|428234088|gb|AFY99877.1| extracellular solute-binding protein family 1 [Calothrix sp. PCC
6303]
Length = 387
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/218 (32%), Positives = 113/218 (51%), Gaps = 26/218 (11%)
Query: 187 LSFAIKKRFIEPIAEAEDQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIG 246
L AI +R I P+ + W L +W+ + +D G +GK+WAAPYRWG+ +
Sbjct: 114 LQDAIARRLIRPLDVGKLPQW-SSLPSRWQELVTRDDRGFPSSQGKVWAAPYRWGSTMMI 172
Query: 247 YKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVIVAG----GKIAVQQNLAL--- 299
Y++ KF + L +DW D W +L R+S+++ PRE+I GK Q+L+
Sbjct: 173 YRRDKFADLGLKAPQDWSDLWRDDLRNRVSLLDHPREIIGLTLKKLGKSYNTQDLSTVPQ 232
Query: 300 -------LANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASL 352
L V+ +DS+ YL+ +GD ++ GWS D+LP + R ++ +VP+SG ++
Sbjct: 233 LEAELQSLNKNVKFYDSSKYLEPLLLGDTLISTGWSHDILPVMTRYPQLSAIVPESGTAI 292
Query: 353 WADLWAIPAASRLETKQIGGQVRGPSPLIHQWIEFCLQ 390
WAD+W P S+ + L+ QWI F Q
Sbjct: 293 WADMWVNPINSQNQVD-----------LLSQWINFYWQ 319
>gi|302829761|ref|XP_002946447.1| hypothetical protein VOLCADRAFT_103032 [Volvox carteri f.
nagariensis]
gi|300268193|gb|EFJ52374.1| hypothetical protein VOLCADRAFT_103032 [Volvox carteri f.
nagariensis]
Length = 561
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 92/334 (27%), Positives = 145/334 (43%), Gaps = 79/334 (23%)
Query: 138 LRVVSLQNSVPQSWVKDFMRSQGKRLKFQMNLCASIDGIVNNLSTPFNK----------- 186
L +V+L+ S+P W DF + GK F ++ + I LS +
Sbjct: 91 LAIVALRGSIPAQWTLDFQTAIGKYCGFSLDQRMQLADIFKELSDTSGENKRSAGLADVI 150
Query: 187 ------LSFAIKKRFIEPIAEAEDQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRW 240
+ AI++ ++PI A W++ L + + N AG DP G+++A
Sbjct: 151 TLGDIWMGAAIQRGLLQPIPGATSSRWYRMLPQRLRQLGHRNAAGMPDPTGEVYA----- 205
Query: 241 GTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVIVAGGKIAVQQN---- 296
Y++ + PI DW D P LAGR++M++SPRE++ A + +N
Sbjct: 206 ------YRRDRLLRRGGRPILDWCDLLQPALAGRVAMLDSPRELLAAAVRSLAAENAGLG 259
Query: 297 ---------------------------------------LALLANQVRLFDSTHYLKAFG 317
+A QVRLF S +++A
Sbjct: 260 DGGGRGVDGGKSGRAWVSVNASARELAAAGISEEVLQGRVAAFRRQVRLFSSQDHVRALQ 319
Query: 318 IGDVWVAVGWSSDVLPAVKRM-SNVAVVVPKSGASLWADLWAIPAASRLETKQIGGQVRG 376
GDVW VG+S +++ +R S++ ++ P SG LWAD+WA+PA +R G + G
Sbjct: 320 AGDVWAVVGYSQELVQLAERSGSSIELLAPLSGTQLWADVWAVPAGAR-----GGHRHSG 374
Query: 377 PSPLIHQWIEFCLQTARALPFKQEVIPGASPSAL 410
PSPL+ WIEF L R Q + G +P+AL
Sbjct: 375 PSPLLPVWIEFTLSPGRIT--GQPSLKGGAPAAL 406
>gi|81301075|ref|YP_401283.1| periplasmic polyamine-binding protein of ABC transporter
[Synechococcus elongatus PCC 7942]
gi|81169956|gb|ABB58296.1| periplasmic polyamine-binding protein of ABC transporter
[Synechococcus elongatus PCC 7942]
Length = 354
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 78/219 (35%), Positives = 114/219 (52%), Gaps = 31/219 (14%)
Query: 211 LSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPE 270
L +W+ LR + G G+IWAAPYRWGT I +++ + + P++DW D W PE
Sbjct: 110 LPQRWRQQLRRDRQGVPSEAGEIWAAPYRWGTTMIAFRRDRLTS----PLQDWTDLWRPE 165
Query: 271 LAGRISMVNSPREVI-VAGGKIAVQQN-------------LALLANQVRLFDSTHYLKAF 316
L G++ + + PREVI + ++ N LA L QV+L+ S +YL+
Sbjct: 166 LRGQLILPDDPREVIGLTLKRLGWSYNQANLAEIPQLEPLLAALQQQVKLYSSRNYLQPL 225
Query: 317 GIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGQVRG 376
+GD AVGWS+D+L A++R S +A VVP+SG ++W DLW P Q R
Sbjct: 226 LLGDALAAVGWSADILAALRRDSRLAAVVPRSGTAIWLDLWVQP------------QGRV 273
Query: 377 PSPLIHQWIEFCLQTARALPFKQEVIPGASPSALESTLV 415
+WI+F A F Q + P ASP+ L + V
Sbjct: 274 SEVFSDRWIDFGWAPTIATQFSQ-LGPAASPAILTAAAV 311
>gi|56751841|ref|YP_172542.1| polyamine ABC transporter periplasmic polyamine-binding protein
[Synechococcus elongatus PCC 6301]
gi|56686800|dbj|BAD80022.1| periplasmic polyamine-binding protein of ABC transporter
[Synechococcus elongatus PCC 6301]
Length = 342
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/219 (35%), Positives = 114/219 (52%), Gaps = 31/219 (14%)
Query: 211 LSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPE 270
L +W+ LR + G G+IWAAPYRWGT I +++ + + P++DW D W PE
Sbjct: 98 LPQRWRQQLRRDRQGVPSEAGEIWAAPYRWGTTMIAFRRDRLTS----PLQDWTDLWRPE 153
Query: 271 LAGRISMVNSPREVI-VAGGKIAVQQN-------------LALLANQVRLFDSTHYLKAF 316
L G++ + + PREVI + ++ N LA L QV+L+ S +YL+
Sbjct: 154 LRGQLILPDDPREVIGLTLKRLGWSYNQANLAEIPQLEPLLAALQQQVKLYSSRNYLQPL 213
Query: 317 GIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGQVRG 376
+GD AVGWS+D+L A++R S +A VVP+SG ++W DLW P Q R
Sbjct: 214 LLGDALAAVGWSADILAALRRDSRLAAVVPRSGTAIWLDLWVQP------------QGRV 261
Query: 377 PSPLIHQWIEFCLQTARALPFKQEVIPGASPSALESTLV 415
+WI+F A F Q + P ASP+ L + V
Sbjct: 262 SEVFSDRWIDFGWAPTIATQFSQ-LGPAASPAILTAAAV 299
>gi|220909337|ref|YP_002484648.1| ABC transporter periplasmic solute-binding protein [Cyanothece sp.
PCC 7425]
gi|219865948|gb|ACL46287.1| ABC transporter, periplasmic solute-binding protein [Cyanothece sp.
PCC 7425]
Length = 377
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 70/192 (36%), Positives = 107/192 (55%), Gaps = 22/192 (11%)
Query: 190 AIKKRFIEPIAEAEDQDWFKRLSHKWKVYL-RSNDAGEIDP-----RGKIWAAPYRWGTM 243
A +++ I+P+ A+ + W ++L +W+ + R + P + ++W APYRWG
Sbjct: 99 AQQQKLIQPLDPAQLRHW-QQLPERWQQLVQRGSQQTPAQPARTAIKQEVWGAPYRWGMT 157
Query: 244 AIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVIV-------------AGGK 290
I Y+K KF+ P DW+D W L R+S+++ PREVI A K
Sbjct: 158 VIAYRKDKFEQLGWLP-ADWQDLWRSPLRHRLSLLDHPREVIGLTLKKLGYSYNTNAPAK 216
Query: 291 IA-VQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSG 349
IA +++ LA L Q + S YL+ +GD W AVGWS+DVLP ++R + V+VP+SG
Sbjct: 217 IADLERELAQLNRQALFYSSDTYLQPLVLGDTWAAVGWSTDVLPLMRRNDKIGVIVPRSG 276
Query: 350 ASLWADLWAIPA 361
+LWAD+W PA
Sbjct: 277 TALWADVWVRPA 288
>gi|427724862|ref|YP_007072139.1| extracellular solute-binding protein [Leptolyngbya sp. PCC 7376]
gi|427356582|gb|AFY39305.1| extracellular solute-binding protein family 1 [Leptolyngbya sp. PCC
7376]
Length = 374
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 81/272 (29%), Positives = 122/272 (44%), Gaps = 48/272 (17%)
Query: 190 AIKKRFIEPIAEAEDQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIGYKK 249
AI ++P+A + + W + L W+ ++ GK + PYRWGT + Y+K
Sbjct: 112 AIAAELLQPLAVDQLETW-QDLDEPWRTFIEEQS-------GKTYGIPYRWGTTLLLYRK 163
Query: 250 SKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVI------------------VAGGKI 291
K + + + DW+D W EL +IS+++ REVI +AG
Sbjct: 164 DKLKKFDWQ-LTDWEDLWREELKNKISLLDHSREVIGFVLKNFGFSYNDKDPEAIAG--- 219
Query: 292 AVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGAS 351
+ + L LL V+ + STHYL+ GD WVA WS D L +KR N+ VVPKSG +
Sbjct: 220 -LSEELGLLHRNVKFYSSTHYLQPLITGDTWVAQAWSQDALSLMKRYRNLGAVVPKSGTA 278
Query: 352 LWADLWAIPAASRLETKQIGGQVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASP---- 407
LW DLW P S E + W+EFC F Q ASP
Sbjct: 279 LWCDLWVQPKKSEREFAD-----------LKPWLEFCANERAINQFAQSTF-AASPLIYQ 326
Query: 408 -SALESTLVKLPEELLKGKPSVDTNLIAGVPP 438
L++ + + P + + ++ +I +PP
Sbjct: 327 TENLDAKVTENPLIFVNPETYQNSEIIETLPP 358
>gi|428220899|ref|YP_007105069.1| spermidine/putrescine-binding periplasmic protein [Synechococcus
sp. PCC 7502]
gi|427994239|gb|AFY72934.1| spermidine/putrescine-binding periplasmic protein [Synechococcus
sp. PCC 7502]
Length = 357
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 85/260 (32%), Positives = 116/260 (44%), Gaps = 43/260 (16%)
Query: 187 LSFAIKKRFIEPIAEAEDQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIG 246
L AI + I P+ W + LS WK + N GK+W PYRWG AI
Sbjct: 95 LDLAIAQHLISPLTITSIPQW-QNLSPLWKQAVTRN--------GKVWGIPYRWGLTAIA 145
Query: 247 YKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVI-VAGGKIAVQQN--------- 296
Y+ K PI W D W EL G+I++ N PREVI + K+ N
Sbjct: 146 YRSDKLD----IPINGWADLWRTELKGKITLPNDPREVIGLTLKKLGYSYNTANIKAIAP 201
Query: 297 ----LALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASL 352
L L QV + S YL+ IGD W+AVGWS D++ ++ S++ VV+P G +L
Sbjct: 202 LTPALQALNQQVLTYTSDSYLQPLLIGDSWLAVGWSQDIVNTAEQNSDIKVVIPAEGTAL 261
Query: 353 WADLWAIPAASRLETKQIGGQVRGPSPLIHQWIEFCLQTA-----RALPFKQEVIP--GA 405
W+DLW P QI GQ W++ CL A AL P G
Sbjct: 262 WSDLWVFPQRVNRPENQIFGQ---------DWLDLCLTPAIANQITALTDATATNPDLGK 312
Query: 406 SPSALESTLVKLPEELLKGK 425
P ++ S ++K P + + K
Sbjct: 313 LPKSVTSNILKFPPDQILAK 332
>gi|86609220|ref|YP_477982.1| polyamine ABC transporter periplasmic polyamine-binding protein
[Synechococcus sp. JA-2-3B'a(2-13)]
gi|86557762|gb|ABD02719.1| polyamine ABC transporter, periplasmic polyamine-binding protein
[Synechococcus sp. JA-2-3B'a(2-13)]
Length = 383
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 125/285 (43%), Gaps = 39/285 (13%)
Query: 140 VVSLQNSVPQSWVKDFMRSQGKRLKFQM-----NLCASIDGIVNNLSTPFNKLSFAIKKR 194
VV+L+ +P S + +F R R + Q+ L A + V + ++R
Sbjct: 34 VVALKQGIPASLLNEFRRRTQARFRLQLLDERDQLLAYLQQSVQPADAAWWDPGGWFRRR 93
Query: 195 FIEPIAEAEDQDWFKR-LSHKWKVYLRSNDAGE----IDPR--------GKIWAAPYRWG 241
D R ++ W L ++ GE +DPR G+IW P+RWG
Sbjct: 94 LPVAALSLLGADALDRAIAAGWLAPLPASLLGERWQNLDPRWQAAALREGQIWGVPWRWG 153
Query: 242 TMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVIVAGGK----------- 290
AI Y++ + + PI DW D W PELAG++++ + PREVI K
Sbjct: 154 VTAIAYRRDRVRE----PIRDWADLWRPELAGKLTLPDHPREVIGLTLKKMGRSYNDPLN 209
Query: 291 ---IAVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPK 347
+ ++Q L L QV + S+ YL + D WVAVGWS D+ +AVV+P
Sbjct: 210 PEDVELRQELGSLHRQVLTYTSSDYLPILRLADSWVAVGWSQDLYATQANYPELAVVIPA 269
Query: 348 SGASLWADLWAIPAA---SRLETKQIGGQVRGPSPLIHQWIEFCL 389
SG+++W D+W P + + L+ W++F L
Sbjct: 270 SGSAIWWDVWVRPHVEDHAHEDNAHTESTQTDSGSLLADWLDFVL 314
>gi|255073983|ref|XP_002500666.1| ATP-binding cassette superfamily [Micromonas sp. RCC299]
gi|226515929|gb|ACO61924.1| ATP-binding cassette superfamily [Micromonas sp. RCC299]
Length = 580
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 65/177 (36%), Positives = 94/177 (53%), Gaps = 23/177 (12%)
Query: 233 IWAAPYRWGTMAIGYKKSKF-QNHNLAPIEDWKDPWWPELAGRISMVNSPREVIVA---- 287
++ PYRWG I Y+K K + P DW D W PE R+ M + PR+++ A
Sbjct: 289 MYGVPYRWGCTLIAYRKDKLPASLRERPPRDWDDLWRPEFKRRVGMGSGPRQMLTAALRA 348
Query: 288 ----------GGKIAVQQNL-ALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVK 336
GG V+ L +L Q+ + D YL+A G GD W+AVG S DVL +
Sbjct: 349 EGMSANADGWGGGGNVRARLESLRREQLLIQDDVQYLQALGNGDAWIAVGNSDDVLSMAR 408
Query: 337 RMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGQVRGPSPLIHQWIEFCLQTAR 393
+ S + VVVP SG +L+AD+W +PA++ ++ GG SPL +QW ++ Q AR
Sbjct: 409 KSSLIGVVVPMSGTTLFADVWCVPASA---ARKPGGV----SPLTNQWFDYTTQPAR 458
>gi|443316967|ref|ZP_21046392.1| spermidine/putrescine-binding periplasmic protein [Leptolyngbya sp.
PCC 6406]
gi|442783430|gb|ELR93345.1| spermidine/putrescine-binding periplasmic protein [Leptolyngbya sp.
PCC 6406]
Length = 393
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 91/339 (26%), Positives = 145/339 (42%), Gaps = 77/339 (22%)
Query: 138 LRVVSLQNSVPQSWVKDFMRSQGKRLKFQMNLCASIDGIVNNLS------------TPFN 185
LR L++S+P V+DF R+Q + L F+ + ++ + L P+
Sbjct: 28 LRASILKDSLPPQLVQDFQRTQSQSLGFKSEVQGNLADLYRQLQRLQTGIPSPRIRLPWT 87
Query: 186 K----------------LSFAIKKRFIEPIAEAEDQDWFKRLSHKWKVYLRSNDAGEIDP 229
+ L+ AI+++ I+P A+ W LS +W + + G
Sbjct: 88 EPPDQRVPNWVSLGNDWLAGAIQQKLIQPFGVADLPHW-PALSERWHTLVTRDIQGFPAA 146
Query: 230 RGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVIVAGG 289
G +WAAPYRWG + + Y ++ F+ P + W D W ELAGR+ + PR ++
Sbjct: 147 NGSVWAAPYRWGALVMLYNRAPFEALGWQP-QSWTDLWRSELAGRVILPRHPRLLLG--- 202
Query: 290 KIAVQQNLALLANQ----------------------------VRLFDSTHYLKAFGIGDV 321
+ ++L AN F THY++ G+
Sbjct: 203 --IILKSLEESANHPDPTQVAELGARMAAMAGAKPNPAGTSPALTFADTHYIEPLIRGEA 260
Query: 322 WVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGQVRGPSPLI 381
WVAVGWS+++ P ++ +A VVP+ G L ADLW PA Q G ++ +P
Sbjct: 261 WVAVGWSTEIRPVLEGYRQLAAVVPEPGTLLSADLWVHPA------PQQGARMPLSAP-E 313
Query: 382 HQWIEFCLQTARALP---FKQEVIPGASPSALESTLVKL 417
WI++ Q ALP F Q G +P L+ T+ L
Sbjct: 314 QAWIDYWWQENTALPLTLFSQ----GLAPQLLDGTIGDL 348
>gi|86605920|ref|YP_474683.1| polyamine ABC transporter polyamine-binding protein [Synechococcus
sp. JA-3-3Ab]
gi|86554462|gb|ABC99420.1| polyamine ABC transporter, polyamine-binding protein [Synechococcus
sp. JA-3-3Ab]
Length = 374
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 129/295 (43%), Gaps = 59/295 (20%)
Query: 135 TVPLRVVSLQNSVPQSWVKDFMRSQGKRLKFQM-----NLCASIDGIVN----------- 178
++PL +++L+ +P S V +F R R + Q+ L A + V
Sbjct: 30 SLPL-ILALKQGIPASLVNEFRRRTQVRFRLQLLDERAQLLAYLQQSVQPPELAWWEPGR 88
Query: 179 --NLSTPFNKLSF--------AIKKRFIEPIAEAEDQDWFKRLSHKWKVYLRSNDAGEID 228
P LS AI +++P+ + ++ L +W+ R
Sbjct: 89 WFRRQPPAAALSLLGADVLDRAIAAGWLDPLPPDLLGERWQHLDRRWQAAARRE------ 142
Query: 229 PRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVI--- 285
G+IW P+RWG AI Y++ + + PI DW D W PELAG++++ + PREVI
Sbjct: 143 --GQIWGVPWRWGVTAIAYRRDRVSD----PIRDWADLWRPELAGKLTLPDHPREVIGLV 196
Query: 286 -----------VAGGKIAVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPA 334
+ + +++ L L QV + S YL + D WVAVGWS D+
Sbjct: 197 LKKLGRSYNDPLDPEEAELRRELGSLHRQVLAYTSADYLPMLRLADSWVAVGWSQDLYAT 256
Query: 335 VKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGQVRGPSPLIHQWIEFCL 389
+ V +P SG+++W D+W P + + ++ G L+ WI+F L
Sbjct: 257 QANYPELEVAIPASGSAIWWDVWVRPHRAHNASPELEGS------LLADWIDFVL 305
>gi|428217472|ref|YP_007101937.1| extracellular solute-binding protein [Pseudanabaena sp. PCC 7367]
gi|427989254|gb|AFY69509.1| extracellular solute-binding protein family 1 [Pseudanabaena sp.
PCC 7367]
Length = 419
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 71/226 (31%), Positives = 101/226 (44%), Gaps = 41/226 (18%)
Query: 187 LSFAIKKRFIEPIAEAE--DQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMA 244
L AI + I PI A+ + +L W+ + N G++W PYRWG+
Sbjct: 152 LDAAIAQDLIRPIPAADLAKISQWPKLEPNWQASVTRN--------GQVWGVPYRWGSTV 203
Query: 245 IGYK--KSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVIVAGGK------------ 290
I Y+ ++KF+ I+ W D W PEL RI + +SPREVI K
Sbjct: 204 IAYRPDRTKFE------IKSWADLWRPELKRRIVLPDSPREVIGLVLKKLGDSYNNENLN 257
Query: 291 --IAVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKS 348
A+ L L QV + S YL+ I D W VGWS D+ + R + VVVP+
Sbjct: 258 AIAALPTELEQLHQQVLFYSSDRYLQPLIIEDAWAVVGWSHDIEAQIDRQPKLRVVVPEE 317
Query: 349 GASLWADLWAIPAASRLETKQIGGQVRGPSPLIHQWIEFCLQTARA 394
G +LW+D+W +P T S ++WI + L A A
Sbjct: 318 GTALWSDIWVLPKQQPRPTN---------SQAAYKWINYTLSPAIA 354
>gi|303290100|ref|XP_003064337.1| ATP-binding cassette superfamily [Micromonas pusilla CCMP1545]
gi|226453935|gb|EEH51242.1| ATP-binding cassette superfamily [Micromonas pusilla CCMP1545]
Length = 647
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/177 (34%), Positives = 88/177 (49%), Gaps = 23/177 (12%)
Query: 231 GKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVIV---- 286
GK++ PYRWG I Y+K K L P DW D + P+ ++ + + R ++
Sbjct: 340 GKLYGVPYRWGCYLIAYRKDKIP-RGLRPPTDWPDLFRPQYKKKVGIASGSRFMLTVALR 398
Query: 287 AGGKIAVQQNLALLANQVRLFD----------STHYLKAFGIGDVWVAVGWSSDVLPAVK 336
AGG+ A ++ A + RL+D L+ GDVW+ G S DVL
Sbjct: 399 AGGRSANATDVDD-ATRNRLYDLRTTQLATQVDLDALQGLSNGDVWIIAGNSDDVLKTAA 457
Query: 337 RMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGQVRGPSPLIHQWIEFCLQTAR 393
+ SN+ VVVP SG +L+AD W +PAA+ + G SPL+ QW +F Q AR
Sbjct: 458 KSSNIGVVVPSSGTTLYADAWCVPAAALDKPG-------GVSPLVDQWFDFTTQPAR 507
>gi|414585609|tpg|DAA36180.1| TPA: hypothetical protein ZEAMMB73_943866 [Zea mays]
Length = 232
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 50/114 (43%), Positives = 68/114 (59%), Gaps = 20/114 (17%)
Query: 124 FENWKWKTYALTVPLRVVSLQNSVPQSWVKDFMRSQGKRLKFQMNLCASIDGIVNNLSTP 183
+ WK KTYAL+VPLR +L+ S P SW+KDF+ QGK+LKF L A++DGI + +S
Sbjct: 112 LQKWKTKTYALSVPLRKGALRGSFPPSWIKDFVEVQGKKLKFSAELRANLDGIFSEMSRC 171
Query: 184 FNK--------------------LSFAIKKRFIEPIAEAEDQDWFKRLSHKWKV 217
+K L +AI K +EP+ AE+QDWF+RLS +WKV
Sbjct: 172 MDKGQVQPKSAMAADVVSLGDSWLGYAICKELLEPVKNAEEQDWFRRLSDRWKV 225
>gi|443476073|ref|ZP_21065996.1| extracellular solute-binding protein family 1 [Pseudanabaena biceps
PCC 7429]
gi|443018979|gb|ELS33141.1| extracellular solute-binding protein family 1 [Pseudanabaena biceps
PCC 7429]
Length = 361
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/252 (29%), Positives = 118/252 (46%), Gaps = 49/252 (19%)
Query: 190 AIKKRFIEPIAE--AEDQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIGY 247
AI + ++PIA + +++LS W+ + N+ ++W PYRWG AI Y
Sbjct: 97 AIAQSLVQPIAPNLLDKIPQWQKLSPFWQQSVTRNN--------QVWGVPYRWGATAIAY 148
Query: 248 KKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVI---------------VAGGK-- 290
+ K + I W D W PEL ++S+ + REVI +A K
Sbjct: 149 RSDKLKFD----ITQWSDLWRPELKQKLSLPDDAREVIGLVLKKMGQSYQVDNLAERKDI 204
Query: 291 -IAVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSG 349
A+ Q+L L++QV + S +YL++ D AVGW+SD+ K+ N+ VV+P+ G
Sbjct: 205 FTALIQDLKSLSSQVLTYSSDNYLQSLLNTDTLAAVGWTSDMYKTAKQNPNLKVVIPQDG 264
Query: 350 ASLWADLWAIPAASRLETKQIGGQVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSA 409
+LW+D+W IP G+V + W+ FCL A+ + SPS
Sbjct: 265 TALWSDIWVIPK----------GEVAIAA---TAWMNFCLTPEIAIQLT-SLTDAVSPS- 309
Query: 410 LESTLVKLPEEL 421
S L K+P +
Sbjct: 310 --SALDKVPNSV 319
>gi|224139138|ref|XP_002326777.1| predicted protein [Populus trichocarpa]
gi|222834099|gb|EEE72576.1| predicted protein [Populus trichocarpa]
Length = 108
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/108 (53%), Positives = 71/108 (65%), Gaps = 8/108 (7%)
Query: 332 LPAVKRMSNVAVVVPKSGASLWADLWA-IPAASRLETKQIGGQVRGPSPLIHQWIEFCLQ 390
P KRMSNVAVV P +G SLWADL + +P L+ + G ++ LIH+WIE LQ
Sbjct: 3 FPLPKRMSNVAVVSPNTGTSLWADLQSQLP--RDLKLIRSGAKLEDHPSLIHEWIEIRLQ 60
Query: 391 TARALPFKQEVIPGASPSALESTLVKLPEELLKGKPSVDTNLIAGVPP 438
ARALPFKQEVIPGA+PS + +P+EL K KP + TNLIA V P
Sbjct: 61 AARALPFKQEVIPGATPSD-----IGVPKELAKCKPKLGTNLIAEVHP 103
>gi|254421830|ref|ZP_05035548.1| hypothetical protein S7335_1980 [Synechococcus sp. PCC 7335]
gi|196189319|gb|EDX84283.1| hypothetical protein S7335_1980 [Synechococcus sp. PCC 7335]
Length = 393
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 104/236 (44%), Gaps = 42/236 (17%)
Query: 187 LSFAIKKRFIEPIAEAEDQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIG 246
L+ AI + IEP++ L KW+ + R + G+I G++W+ PY+ + +
Sbjct: 101 LTEAIVQDLIEPLSIPTTS--LDLLPSKWQAFGRRDHTGQITSDGELWSVPYKLQPLVVV 158
Query: 247 YKKSKF---QNHNLAPIEDWKDPWWPELAGRISMVNSPREVI------------------ 285
Y+ S+F P W+D P+L+ I++ + PR +I
Sbjct: 159 YRHSQFLAKSRTGKQPFSSWQDLLAPDLSRSIALPSHPRILISLLQKLQTGSFNPVSTDN 218
Query: 286 -VAGGKIAVQQN------LALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRM 338
V+ ++ Q N A L QV+ +DS LKA DV V VGWSSDV A+KR
Sbjct: 219 PVSSEQLLSQLNDQLAAPFAKLTAQVKTYDSNTALKALINEDVKVVVGWSSDVAVALKRY 278
Query: 339 SNVAVVVPKSGASLWADLWAIPAASRLETKQIGGQVRGPSPLIHQWIEFCLQTARA 394
++ VVP G+ L AD+W P + L + WI FC Q A
Sbjct: 279 RDLRAVVPDEGSLLSADMWVQPKGATLTSA------------AKTWISFCWQQGPA 322
>gi|22298258|ref|NP_681505.1| hypothetical protein tll0716 [Thermosynechococcus elongatus BP-1]
gi|22294437|dbj|BAC08267.1| tll0716 [Thermosynechococcus elongatus BP-1]
Length = 352
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 88/315 (27%), Positives = 136/315 (43%), Gaps = 50/315 (15%)
Query: 138 LRVVSLQNSVPQSWVKDFMRSQGK--RLKFQMNLCASIDGIVNN------LSTPFNKLSF 189
L V L+ S+P ++ F + G L+ Q A D + LS L+
Sbjct: 33 LTVHLLRKSLPPQLIQRFRQQAGVGIHLRLQETPQALADTLAAGNLGSAVLSLGDAWLNQ 92
Query: 190 AIKKRFIEPIAEAEDQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIGYKK 249
A+ + I PI + Q+ F + W+ L++ G+ +W PYRWG A+ Y++
Sbjct: 93 AMSQHQIAPIPKTRIQNRFD-WAEPWQPLLQAISQGD-----TLWGLPYRWGATALIYRR 146
Query: 250 SKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVIVAGGKI------------AVQQNL 297
F + P DW W P + G S++N+PREVI K +++ L
Sbjct: 147 DFFADLGWEPT-DWDVLWHPAVQGHYSLLNTPREVIGLTLKSLGLSYNSPAPHPELRERL 205
Query: 298 ALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKR-MSNVAVVVPKSGASLWADL 356
L R S YL+ +G +AVGWS+D+LP +++ V P SG +LW DL
Sbjct: 206 QHLRQGCRFLSSDAYLQPLMLGSTQLAVGWSTDLLPLLQQDPQTYGAVFPASGTALWVDL 265
Query: 357 WAIPA---ASRLE----------TKQIGGQVRGPSPLIHQWIEFCLQTARALPFKQEVIP 403
W P A+ L +++ PSPL+ E L +R +PF
Sbjct: 266 WVCPREPNAAALAWLNYWWQPQVAERLSQFSPAPSPLVRNLRETLL--SRYIPF------ 317
Query: 404 GASPSALESTLVKLP 418
A+P+A + V LP
Sbjct: 318 -ATPTAFAKSEVLLP 331
>gi|424513096|emb|CCO66680.1| periplasmic polyamine-binding protein of ABC transporter
[Bathycoccus prasinos]
Length = 572
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 103/232 (44%), Gaps = 26/232 (11%)
Query: 187 LSFAIKKRFIEPIAEAEDQDWFKRLSHKWK-VYLRSNDAGEI----DPRGKIWAAPYRWG 241
L AI+++ I P + WF+ L +K + R G+I DP G+++A PYR
Sbjct: 273 LKAAIREKLILPFEITGKERWFRALPDVYKNLCFRDYRTGDIVRSTDPNGRLFAVPYRVT 332
Query: 242 TMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGR--ISMVNSPREVIVAGGKIAVQQN--- 296
+ Y+ K + I DW D + P + + ++PREV+ A K+ +N
Sbjct: 333 ATLLAYRADKLP-RGVEAITDWTDVFDPRFGNKTFVGCADAPREVLSAALKMGDPRNTIN 391
Query: 297 -------------LALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAV 343
L L ++++ D YL+A GD+ VA G S DVL +R S V
Sbjct: 392 PKTIDNERSQRDALRRLRAKIKVSDDETYLRALQNGDISVAFGGSDDVLALCRRSSLVKP 451
Query: 344 VVPKSGASLWADLWAIPAASRLE--TKQIGGQVRGPSPLIHQWIEFCLQTAR 393
V P SG +L D++ P + T + SP I W++F L + R
Sbjct: 452 VFPPSGTALHCDVFVRPVLNEGGGYTSSVPHSAPSSSPGIDAWLDFMLDSGR 503
>gi|357385895|ref|YP_004900619.1| putrescine ABC transporter putrescine-binding protein PotF
[Pelagibacterium halotolerans B2]
gi|351594532|gb|AEQ52869.1| putrescine ABC transporter putrescine-binding protein PotF
[Pelagibacterium halotolerans B2]
Length = 363
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 80/161 (49%), Gaps = 28/161 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQNH--NLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP G ++ PY WGT IGY P++ W + PE+A + IS++++
Sbjct: 118 DP-GAQYSVPYMWGTTGIGYNVGAITERLGEDGPLQSWDLLFDPEIAAQLADCGISVLDA 176
Query: 281 PREVIVAGGKI--------------AVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVG 326
P E++ A A +Q +A + +R+F+S+ Y+ G++ +AVG
Sbjct: 177 PVEMVAAALNYLGLDPNSETPEDLEAAEQLIASIRPHIRMFNSSQYISDLANGEICLAVG 236
Query: 327 WSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPA 361
+S DV A R + +A V+P+ GASLW D+ AIPA
Sbjct: 237 YSGDVFIAADRAAEAGQGVEIAYVIPEEGASLWFDMMAIPA 277
>gi|149187665|ref|ZP_01865962.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Vibrio shilonii AK1]
gi|148838545|gb|EDL55485.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Vibrio shilonii AK1]
Length = 369
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 81/169 (47%), Gaps = 29/169 (17%)
Query: 224 AGEIDPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGRIS----- 276
A +DP ++ PY WGT IGY +K + AP++ W + PE ++S
Sbjct: 120 ADTVDPDNA-YSVPYLWGTTGIGYNVAKVKEVLGEDAPVDSWDLVFKPENMEKLSKCGVG 178
Query: 277 MVNSPREVIVAG----GKI-------AVQQNLALLANQVR----LFDSTHYLKAFGIGDV 321
+N+P E++ A GK A +++ L QVR F S+ Y+ GDV
Sbjct: 179 FLNAPTEIMAAALNYIGKDPNSTDPNAYKKDALALLKQVRPYVTYFHSSQYINDLANGDV 238
Query: 322 WVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
VA+GWS DVL A R + VA +PK GA W DL AIP ++
Sbjct: 239 CVAIGWSGDVLQAADRAAEADNGVEVAYSIPKEGALAWFDLMAIPKEAK 287
>gi|119512455|ref|ZP_01631537.1| periplasmic polyamine-binding protein of ABC transporter [Nodularia
spumigena CCY9414]
gi|119462921|gb|EAW43876.1| periplasmic polyamine-binding protein of ABC transporter [Nodularia
spumigena CCY9414]
Length = 244
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 60/105 (57%), Gaps = 11/105 (10%)
Query: 187 LSFAIKKRFIEPIAEAEDQDWFKRLSH------KWKVYLRSNDAGEIDPRGKIWAAPYRW 240
L AI+++ I+P+ EAE K+L H W+ + ++ G +D +G +WAAPYRW
Sbjct: 125 LKAAIEQKLIQPLEEAE----IKQLKHWSALDKTWQQLVTRDNQGNLDTQGNVWAAPYRW 180
Query: 241 GTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVI 285
G+ I Y + K Q+ P +DW D W L RIS+V+ REVI
Sbjct: 181 GSTVIVYNRQKLQSLGWTP-QDWSDLWRDGLQERISIVDQSREVI 224
>gi|261253386|ref|ZP_05945959.1| putrescine ABC transporter putrescine-binding protein PotF [Vibrio
orientalis CIP 102891 = ATCC 33934]
gi|417953143|ref|ZP_12596191.1| extracellular solute-binding protein family 1 [Vibrio orientalis
CIP 102891 = ATCC 33934]
gi|260936777|gb|EEX92766.1| putrescine ABC transporter putrescine-binding protein PotF [Vibrio
orientalis CIP 102891 = ATCC 33934]
gi|342817675|gb|EGU52552.1| extracellular solute-binding protein family 1 [Vibrio orientalis
CIP 102891 = ATCC 33934]
Length = 369
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 78/169 (46%), Gaps = 29/169 (17%)
Query: 224 AGEIDPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----IS 276
A +DP ++ PY WGT IGY K AP++ W+ + PE + +
Sbjct: 120 ADTVDPNND-YSIPYLWGTTGIGYNVEKVAAVLGKDAPVDSWELVFKPENMEKLAQCGVG 178
Query: 277 MVNSPREVIVAG----GK-------IAVQQNLALLANQVR----LFDSTHYLKAFGIGDV 321
+N+P E++ A GK +Q+ L QVR F S+ Y+ GD+
Sbjct: 179 FLNAPSEIMAASLNYLGKDPNSTKTSDYKQDALALLKQVRPYVTYFHSSQYINDLANGDI 238
Query: 322 WVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
VA+GWS DVL A R + +A +PK GA W DL AIP ++
Sbjct: 239 CVAIGWSGDVLQAADRAAEADNGVEIAYSIPKEGALAWFDLMAIPKEAK 287
>gi|90021014|ref|YP_526841.1| transcription factor jumonji, jmjC [Saccharophagus degradans 2-40]
gi|89950614|gb|ABD80629.1| extracellular solute-binding protein, family 1 [Saccharophagus
degradans 2-40]
Length = 365
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 77/164 (46%), Gaps = 30/164 (18%)
Query: 225 GEIDPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISM 277
++DP+ PY WGT IGY K ++ P+ W + PE+AG+ IS+
Sbjct: 117 ADLDPQNN-HMVPYMWGTTGIGYNVDKIKSLLGKDVPVNTWALIFNPEIAGKLASCGISL 175
Query: 278 VNSPREVIVAGGKI-----------AVQQNLALLA----NQVRLFDSTHYLKAFGIGDVW 322
++ EV A KI A Q+ +A L +R F S+ Y+ GD+
Sbjct: 176 MDDATEVF-AAAKIYLGIDASDFSKATQEAVAALVAKTRKNIRYFHSSQYINDLANGDLC 234
Query: 323 VAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIP 360
VA G+S DVL A R NVA VP+ GA +W+D+ IP
Sbjct: 235 VAHGYSGDVLQARARAEEAEKGVNVAYTVPQEGAVVWSDVMVIP 278
>gi|374853292|dbj|BAL56204.1| extracellular solute-binding protein [uncultured candidate division
OP1 bacterium]
gi|374857069|dbj|BAL59922.1| extracellular solute-binding protein [uncultured candidate division
OP1 bacterium]
Length = 352
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 83/182 (45%), Gaps = 37/182 (20%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPE----LAGRISMVNSPRE 283
DP+ + ++ PY WGT IGY K + P W D + P+ R+SM++ PRE
Sbjct: 122 DPQNR-YSIPYLWGTTGIGYNAQKLE----TPPTSWADLFEPDRLERYKNRVSMLDDPRE 176
Query: 284 VIVAGGK-------------IAVQQNLALLAN-QVRLFDSTHYLKAFGIGDVWVAVGWSS 329
I A K + +NL L+ + +DS Y GD+ +A GWS
Sbjct: 177 AIGAALKYLGYSVNSTDPQQLEAAKNLLLVQKPYLARYDSETYDDFLLTGDLVLAHGWSG 236
Query: 330 DVLPAVKRMSNVAVVVPKSGASLWADLWAIPAAS-RLETKQIGGQVRGPSPLIHQWIEFC 388
+ A SN+ V+P+ G +WAD AIP +S R++ L H +I+F
Sbjct: 237 EFAKAHVENSNIRYVIPREGGVIWADNLAIPKSSQRID-------------LAHTFIDFL 283
Query: 389 LQ 390
L+
Sbjct: 284 LR 285
>gi|323494348|ref|ZP_08099460.1| extracellular solute-binding protein family 1 [Vibrio brasiliensis
LMG 20546]
gi|323311511|gb|EGA64663.1| extracellular solute-binding protein family 1 [Vibrio brasiliensis
LMG 20546]
Length = 369
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 78/169 (46%), Gaps = 29/169 (17%)
Query: 224 AGEIDPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----IS 276
A +DP ++ PY WGT IGY K + AP++ W + PE + +
Sbjct: 120 ADTVDPNND-YSIPYLWGTTGIGYNIEKVEAILGKDAPVDSWDLVFKPENMEKLAQCGVG 178
Query: 277 MVNSPREVIVAG----GKI--------AVQQNLALLAN---QVRLFDSTHYLKAFGIGDV 321
+N+P E++ A GK + LALL + V F S+ Y+ GD+
Sbjct: 179 FLNAPSEIMAASLNYLGKDPNSTKTSDYKKDALALLKDIRPYVTYFHSSQYINDLANGDI 238
Query: 322 WVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
VA+GWS DVL A R + +A +PK GA W DL AIP ++
Sbjct: 239 CVAIGWSGDVLQAADRAAEADNGVEIAYSIPKEGALAWFDLMAIPKEAK 287
>gi|407771361|ref|ZP_11118719.1| extracellular solute-binding protein [Thalassospira xiamenensis M-5
= DSM 17429]
gi|407285580|gb|EKF11078.1| extracellular solute-binding protein [Thalassospira xiamenensis M-5
= DSM 17429]
Length = 367
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 76/323 (23%), Positives = 132/323 (40%), Gaps = 52/323 (16%)
Query: 138 LRVVSLQNSVPQSWVKDFMRSQGKRLKFQM---NLCASIDGIVNNLSTPFNKLSFAIKKR 194
L V + + + + V +F + G ++ + + N + N + A +R
Sbjct: 30 LNVYNWSDYIGEETVANFEKEYGVKVNYDVYDSNQVVEAKLLAGNSGYDLVVPTLADAQR 89
Query: 195 FIEP-IAEAEDQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIGYKKSKFQ 253
I+ I + D+ + + KV L N + DP +A PY WGT IGY +K Q
Sbjct: 90 LIQAGIFQKVDKSKLENFGNLDKVIL--NQTAKYDPNND-YAVPYLWGTNGIGYNVAKVQ 146
Query: 254 N--HNLAPIEDWKDPWWPELAGRIS-----MVNSPREVI--------------VAGGKIA 292
+ AP++ W + P+ A ++S M++ P E++ A
Sbjct: 147 EALGDDAPLDSWALVFDPQYAEKLSKCGLTMLDDPGEIVPLVNFYLDKPDSKQSTADIEA 206
Query: 293 VQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRM------SNVAVVVP 346
L + + F S+ Y+ G+V V++GWS DV A R + + V+P
Sbjct: 207 AMAELEKIRPYITYFHSSQYINDLANGNVCVSIGWSGDVGQAALRAEEAGNGNEIKYVIP 266
Query: 347 KSGASLWADLWAIPAASRLETKQIGGQVRGPSP-LIHQWIEFCLQTARALPFKQEVIPGA 405
K G +W D+ IPA + P+P L H++I++ L+ + A
Sbjct: 267 KEGTLIWFDVMMIPADA-------------PNPDLAHKFIDYILRADVGADLAN-YVEYA 312
Query: 406 SPSALESTLVKLPEELLKGKPSV 428
SP+ ++ +E LK P V
Sbjct: 313 SPN---EAAMEFIDEDLKADPGV 332
>gi|386826294|ref|ZP_10113401.1| spermidine/putrescine-binding periplasmic protein [Beggiatoa alba
B18LD]
gi|386427178|gb|EIJ41006.1| spermidine/putrescine-binding periplasmic protein [Beggiatoa alba
B18LD]
Length = 369
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 85/176 (48%), Gaps = 31/176 (17%)
Query: 217 VYLRSNDAGEIDPRGKIWAAPYRWGTMAIGY--KKSKFQNHNLAPIEDWKDPWWPELAGR 274
V L+S +A +DP K +A PY WGT IGY +K K AP++ W + PE +
Sbjct: 114 VVLKSLEA--VDPENK-FAIPYLWGTTGIGYNPEKVKAALGENAPVDSWDLVFKPENLEK 170
Query: 275 IS-----MVNSPREV--IVAG--GKIAVQQN-----------LALLANQVRLFDSTHYLK 314
+S +++P EV IV GK + +N + L + F S+ Y+
Sbjct: 171 LSKCGVYFLDTPTEVFPIVLNYLGKEPLSENSDDYTKIVQPFMLKLRPFITNFHSSEYIN 230
Query: 315 AFGIGDVWVAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIPAASR 364
A GD+ VAVGWS DVL A R + V VPK G +W D+ AIP ++
Sbjct: 231 ALANGDICVAVGWSGDVLQAADRAAEANKGVKVEYSVPKEGTIMWVDMMAIPKDAK 286
>gi|167630347|ref|YP_001680846.1| spermidine/putrescine abc transporter spermidine/putrescine-binding
protein [Heliobacterium modesticaldum Ice1]
gi|167593087|gb|ABZ84835.1| spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Heliobacterium
modesticaldum Ice1]
Length = 369
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 68/156 (43%), Gaps = 27/156 (17%)
Query: 227 IDPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVIV 286
DP G + Y WG I Y + PI W+D W P+ GR+ ++N REV+
Sbjct: 141 FDP-GNKHSVVYTWGITGIAYNTKYVK----EPISSWQDLWNPKYKGRLVLLNDSREVL- 194
Query: 287 AGGKIAVQQN------------------LALLANQVRLFDSTHYLKAFGIGDVWVAVGWS 328
+A+++N L LA V FD+ + F + W+ WS
Sbjct: 195 ---GMALKKNGFSNSTKDQKELDKAFNDLKTLAPNVLAFDTDDIKQKFITEEAWIGTMWS 251
Query: 329 SDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 364
D K +VA V+PK G ++WAD AIP ++
Sbjct: 252 GDAAFVYKDNKDVAFVIPKEGTTIWADTLAIPKGAK 287
>gi|418293170|ref|ZP_12905089.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas stutzeri ATCC 14405 = CCUG 16156]
gi|379064572|gb|EHY77315.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas stutzeri ATCC 14405 = CCUG 16156]
Length = 361
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 73/162 (45%), Gaps = 27/162 (16%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQNH-NLAPIEDWKDPWWPELAGR-----ISMVNSP 281
DP G AAPY WGT IGY K + + IE W + PE A + I+ ++S
Sbjct: 117 DP-GNAHAAPYLWGTNGIGYNVEKVKAALGVDEIESWSVIFEPENAAKLASCGIAFLDSA 175
Query: 282 REVI--------------VAGGKIAVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGW 327
E+I A ++ L + VR F S+ Y+ G++ VA G+
Sbjct: 176 DEMIPAMLNYLGLDPNSQNAADYQKAEEKLLAVRPHVRYFHSSKYISDLANGNICVAAGF 235
Query: 328 SSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIPAAS 363
S DV A R +A +PK GA+LW D+ AIPA S
Sbjct: 236 SGDVFQAAARAEEAGKGIEIAYAIPKEGANLWFDMLAIPADS 277
>gi|372269532|ref|ZP_09505580.1| transcription factor jumonji, jmjC [Marinobacterium stanieri S30]
Length = 363
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 71/152 (46%), Gaps = 27/152 (17%)
Query: 237 PYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNSPREVIVAG- 288
PY WG+ IGY K + + P + W+ + PE+ + +++++ P EV+VA
Sbjct: 126 PYMWGSSGIGYNVEKVREVLGDDMPKDTWRLLFDPEIVAKLASCGVTLMDDPTEVLVAAN 185
Query: 289 -------------GKIAVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAV 335
G + +A + +R F S+ Y+ GD+ VA G+S DVL A
Sbjct: 186 IYRGANADDFSKAGIAGASETVAAVRPHIRYFHSSQYINDLANGDICVAHGYSGDVLQAR 245
Query: 336 KRMS------NVAVVVPKSGASLWADLWAIPA 361
R + +A VP GA +W D+ AIPA
Sbjct: 246 DRAAEAGNGVEIAYAVPSEGALVWTDVMAIPA 277
>gi|374308426|ref|YP_005054857.1| spermidine/putrescine ABC transporter spermidine/putrescine-binding
protein [Filifactor alocis ATCC 35896]
gi|291166751|gb|EFE28797.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Filifactor alocis
ATCC 35896]
Length = 354
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 79/177 (44%), Gaps = 33/177 (18%)
Query: 206 DWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKD 265
D FK LS+ DP GK ++ PY WG++ I Y K+K P++ W
Sbjct: 120 DRFKNLSY--------------DPNGK-YSVPYLWGSLGILYNKTKVTE----PVDSWNI 160
Query: 266 PWWPELAGRISMVNSPREVIVA-----GGKIAVQQNLAL------LANQ---VRLFDSTH 311
W + G I M++S R+ I G I Q L L Q VR ++ +
Sbjct: 161 LWNEKYKGDIVMLDSSRDTIAVALLKLGYSINTQNEEELQKAKEELIKQKPLVRSYEVDN 220
Query: 312 YLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETK 368
Y + G++ + V W+ D + + ++ +PK G +LW D AIP S+ +T+
Sbjct: 221 YKNSMASGELAMVVTWAGDAMNLMAENEDLEYALPKEGTNLWFDAIAIPVTSKHKTE 277
>gi|409396641|ref|ZP_11247621.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas sp. Chol1]
gi|409118823|gb|EKM95214.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas sp. Chol1]
Length = 365
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 96/218 (44%), Gaps = 36/218 (16%)
Query: 227 IDPR--GKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPE-----LAGRISM 277
+DP G +A PY WGT+ IGY K + + AP++ W + PE A +S
Sbjct: 116 LDPSDPGNQYAIPYMWGTIGIGYNVDKVKAVLGDNAPVDSWDLVFKPENIEKLKACGVSF 175
Query: 278 VNSPREVIVAG----------GKIAVQQNLALLANQVR----LFDSTHYLKAFGIGDVWV 323
++SP E++ A GK + L Q+R F S+ Y+ G+ V
Sbjct: 176 LDSPTEILPAALHYLGYAPDSGKADELKKAEELFMQIRPHVAYFHSSKYISDLANGETCV 235
Query: 324 AVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPA-ASRLETKQIG-GQVR 375
A+G+S D+ A R NV +PK GA + D+ AIPA A +E + +
Sbjct: 236 AIGYSGDIYQAKARAEEAKNGVNVGYKIPKEGAGSFFDMVAIPADAKNVENAHVFINYLM 295
Query: 376 GPSPL--IHQWIEFCLQTARALPFKQEVI---PGASPS 408
P + I +++F A + P E I PG PS
Sbjct: 296 KPEVMASITDYVQFPNANAASTPLVAEAIRTDPGIYPS 333
>gi|300869344|ref|ZP_07113934.1| extracellular solute-binding protein [Oscillatoria sp. PCC 6506]
gi|300332643|emb|CBN59132.1| extracellular solute-binding protein [Oscillatoria sp. PCC 6506]
Length = 376
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 98/221 (44%), Gaps = 44/221 (19%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPE--LAGRISMVNSPREVI 285
DP G ++ P WGT + Y K + PIEDW D W + L+ R++++N REV+
Sbjct: 148 DP-GNRYSVPLAWGTTGLIYNTEKIK----YPIEDWDDLWKNQKALSKRMTLLNDLREVM 202
Query: 286 VAGGKI--------------AVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDV 331
A ++ + L+ L + F + + +GD+ VA+ +SSD
Sbjct: 203 GAALRMLGYSLNTTNPNEIREAYERLSELKPDLASFTTDAWRPQMLVGDLMVAMCYSSDA 262
Query: 332 LPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGQVRGPSP-LIHQWIEFCLQ 390
+ +N+ +VP+SG+SLW D IP + P+P ++WI F LQ
Sbjct: 263 NEVIPENTNLQYIVPRSGSSLWTDTLVIPKFA-------------PNPEAAYKWINFMLQ 309
Query: 391 TARA------LPF---KQEVIPGASPSALESTLVKLPEELL 422
A L F +E P E+ ++ PEE+L
Sbjct: 310 GDVAASLVDRLSFSTPSEEAFNLLEPEVRENKILFPPEEIL 350
>gi|313884789|ref|ZP_07818543.1| putative spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD [Eremococcus
coleocola ACS-139-V-Col8]
gi|312619988|gb|EFR31423.1| putative spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD [Eremococcus
coleocola ACS-139-V-Col8]
Length = 358
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 97/220 (44%), Gaps = 49/220 (22%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVIVA 287
DP+ + ++ PY WGT+ I Y S + I DW D W P G+I M++ RE+I
Sbjct: 127 DPQNQ-YSVPYFWGTLGIIYNTSMIEE---GSIRDWADLWNPAYQGKILMIDGAREMIGI 182
Query: 288 GGKIAVQQNLALLANQVRLFDSTHYLKA----------------------FGIGDVWVAV 325
G Q+L N + DS+H A G+V +AV
Sbjct: 183 G-----LQSLGYSLNDI---DSSHIRAAADKMKTLMPNVVGLITDEIKMHIAEGEVPLAV 234
Query: 326 GWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGQVRGPSPLIHQWI 385
+S + A+ + ++A VVP+ G++LW D +AIP +I V G LI+ I
Sbjct: 235 TFSGEAATAMDQNEDLAYVVPEKGSNLWLDTFAIP--------KIADNVEGAYALINFLI 286
Query: 386 EFCLQTARALPFKQEVIPGASPSALESTLVKLPEELLKGK 425
A A E + A+P+ +E+ LP+E+ K
Sbjct: 287 SKEASIANA-----EYVGYATPN-MEAK-AALPKEITDDK 319
>gi|374331995|ref|YP_005082179.1| putrescine-binding periplasmic protein [Pseudovibrio sp. FO-BEG1]
gi|359344783|gb|AEV38157.1| Putrescine-binding periplasmic protein [Pseudovibrio sp. FO-BEG1]
Length = 368
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 112/258 (43%), Gaps = 43/258 (16%)
Query: 138 LRVVSLQNSVPQSWVKDFMRSQGKRLKF---------QMNLCASIDGIVNNLSTPFNKLS 188
+ V + + + +S +KDF G ++ + + L A G ++ P
Sbjct: 32 VNVYNWSDYIDESVLKDFEAETGIKVNYDVFDSNEVLETKLLAGTTGY--DIVVPTGSF- 88
Query: 189 FAIKKRFIEPIAEAEDQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIGYK 248
+ ++ + + D+D L + W V S+ DP ++ Y WGT IGY
Sbjct: 89 --LSRQIQAGVFQKLDKDTLPNLKNMWSVV--SDRTSIYDPDNA-YSINYMWGTTGIGYN 143
Query: 249 -KSKFQNHNLAPIEDWKDPWWPELAGR-----ISMVNSPREVIVAG-----------GKI 291
++ + + P++ W+ + PE+ + I M+++P E+I A K
Sbjct: 144 VEAAAKRLDGKPVDSWEIIFNPEILAKFQDCGIHMLDAPTELIPAALNHLGLNPDSHDKA 203
Query: 292 AVQQNLALLAN---QVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVA 342
+++ LL V+ F S+ Y+ A GD+ +A+GWS DV A R + V
Sbjct: 204 EIEKAAELLKTIRPYVQKFHSSEYINALANGDICLAIGWSGDVFQARDRAAEADNGVTVN 263
Query: 343 VVVPKSGASLWADLWAIP 360
++PK GA +W D AIP
Sbjct: 264 YIIPKEGALMWFDQMAIP 281
>gi|397688815|ref|YP_006526134.1| putrescine ABC transporter substrate-binding protein [Pseudomonas
stutzeri DSM 10701]
gi|395810371|gb|AFN79776.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas stutzeri DSM 10701]
Length = 365
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 98/218 (44%), Gaps = 41/218 (18%)
Query: 228 DPRGKIWAAPYRWGTMAIGY--KKSKFQNHNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP G ++ PY WGT+ IGY +K K + AP++ W + PE + ++ ++S
Sbjct: 120 DP-GNQYSVPYMWGTIGIGYNPEKVKAALGDNAPVDSWDLVFKPENIEKLKSCGVAFLDS 178
Query: 281 PREVIVAG----------GKIAVQQNLALLANQVR----LFDSTHYLKAFGIGDVWVAVG 326
P E++ A GK + L Q+R F S+ Y+ G++ VA+G
Sbjct: 179 PTEMLPAALHYLGYASDSGKADELKKAEELFLQIRPHVAYFHSSKYISDLANGNICVAIG 238
Query: 327 WSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPA-ASRLETKQ------IGGQ 373
+S D+ A R NV+ +PK GA + D+ AIPA A +E + +
Sbjct: 239 YSGDIYQAKSRAEDAQNGVNVSYNIPKEGAGSFFDMLAIPADAKNVENAHAFLNYLLKPE 298
Query: 374 VRGPSPLIHQWIEFCLQTARALPFKQEVI---PGASPS 408
V P I +++F A A P E I PG PS
Sbjct: 299 VMAP---IVDYVQFPSANAAATPLVDEAIRTDPGIYPS 333
>gi|228920100|ref|ZP_04083449.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis serovar huazhongensis BGSC 4BD1]
gi|423579582|ref|ZP_17555693.1| hypothetical protein IIA_01097 [Bacillus cereus VD014]
gi|423637961|ref|ZP_17613614.1| hypothetical protein IK7_04370 [Bacillus cereus VD156]
gi|228839556|gb|EEM84848.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis serovar huazhongensis BGSC 4BD1]
gi|401218044|gb|EJR24729.1| hypothetical protein IIA_01097 [Bacillus cereus VD014]
gi|401272763|gb|EJR78754.1| hypothetical protein IK7_04370 [Bacillus cereus VD156]
Length = 349
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 65/152 (42%), Gaps = 19/152 (12%)
Query: 227 IDPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVIV 286
DP K ++ Y WG I Y K + AP W D W + GR++++N REV+
Sbjct: 120 FDPENK-YSLVYTWGVTGIAYNKKYVKE---APTS-WADLWNEKYKGRVTLLNDSREVLG 174
Query: 287 AGGKI--------------AVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVL 332
G K +L L + FD+ + + F D W+ WS D
Sbjct: 175 MGLKKHGFSNSTKDDAQLKTAADDLKKLLPNLLAFDTDNIKQKFITEDAWIGTVWSGDAA 234
Query: 333 PAVKRMSNVAVVVPKSGASLWADLWAIPAASR 364
K +V VVPK G ++WAD AIP ++
Sbjct: 235 FIAKDNKDVEYVVPKEGGTIWADTLAIPKGAK 266
>gi|375264908|ref|YP_005022351.1| extracellular solute-binding protein [Vibrio sp. EJY3]
gi|369840232|gb|AEX21376.1| extracellular solute-binding protein [Vibrio sp. EJY3]
Length = 369
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 74/166 (44%), Gaps = 29/166 (17%)
Query: 227 IDPRGKIWAAPYRWGTMAIGY--KKSKFQNHNLAPIEDWKDPWWPELAGR-----ISMVN 279
+DP ++ PY WGT IGY +K K AP+ W + PE + + +N
Sbjct: 123 VDPENA-YSVPYLWGTTGIGYNVEKVKAALGEDAPVNSWDLVFKPENMEKLAKCGVGFLN 181
Query: 280 SPREVIVAG-GKIAVQQN-----------LALLAN---QVRLFDSTHYLKAFGIGDVWVA 324
+P E++ A I N L LL V F S+ Y+ GD+ VA
Sbjct: 182 APSEIMAASLNYIGKDPNSTDPNDYKKDALELLKTVRPYVTYFHSSQYINDLANGDICVA 241
Query: 325 VGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
+GWS DVL A R + +A +PK GA W DL AIP ++
Sbjct: 242 IGWSGDVLQAADRAAEADNGVEIAYSIPKEGALAWFDLMAIPKDAK 287
>gi|374336217|ref|YP_005092904.1| putrescine ABC transporter periplasmic-binding protein [Oceanimonas
sp. GK1]
gi|372985904|gb|AEY02154.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Oceanimonas sp. GK1]
Length = 368
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 74/178 (41%), Gaps = 38/178 (21%)
Query: 225 GEIDPR----------GKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELA 272
G +DPR G + PY WGT IGY K + AP++ W PE
Sbjct: 108 GNLDPRIMTLLAEKDPGNQYGVPYLWGTTGIGYNVDKVKEVLGEDAPVDSWDLVMKPENL 167
Query: 273 GRIS-----MVNSPREVIVAG---------GKIAVQQN------LALLANQVRLFDSTHY 312
++S +++P E+ A A N + L + F S+ Y
Sbjct: 168 AKLSQCGVAFLDAPTEIFAAALNYQGLDPNSTNASDYNGPATELMMQLRPHITYFHSSKY 227
Query: 313 LKAFGIGDVWVAVGWSSDVLPA------VKRMSNVAVVVPKSGASLWADLWAIPAASR 364
+ GD+ VAVGWS D+L A +R VA +PK GA +W D+ IP +R
Sbjct: 228 INDLANGDICVAVGWSGDILQARDRADEAERGVKVAYRIPKEGALMWVDMLTIPKDAR 285
>gi|110632525|ref|YP_672733.1| extracellular solute-binding protein [Chelativorans sp. BNC1]
gi|110283509|gb|ABG61568.1| extracellular solute-binding protein, family 1 [Chelativorans sp.
BNC1]
Length = 365
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 104/249 (41%), Gaps = 51/249 (20%)
Query: 204 DQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIGYKKSKFQNH-NLAPIED 262
D+ LS+ W S DP G ++ Y WGT IGY K+K + I
Sbjct: 99 DKSKLPNLSNMWD--FVSERTAVYDP-GNEYSVNYMWGTTGIGYNKAKVKEALGTDRINS 155
Query: 263 WKDPWWPELAGR-----ISMVNSPREVIVAGGKI-----------AVQQNLALLAN---Q 303
W + PE+A + I ++++ E+ A +Q+ ALL +
Sbjct: 156 WDVVFKPEVASKLAGCGIHVLDASSEITHAALNYLGLDPNSDNPDDLQKVEALLLSVRPN 215
Query: 304 VRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLW 357
+R F S+ Y+ A GD+ VAVG+S DV A R + +A +PK GA +W D
Sbjct: 216 IRKFHSSEYINALANGDICVAVGYSGDVFQARDRAAEAGQGVEIAYAIPKEGAQMWFDQM 275
Query: 358 AIPA-ASRLETKQIGGQVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALESTLVK 416
AIPA A +E H++I + + + EVI AS + K
Sbjct: 276 AIPADAPHVEEA-------------HEFINYMM--------RPEVIAKASNYVFYANGNK 314
Query: 417 LPEELLKGK 425
+ELL +
Sbjct: 315 ASQELLDAE 323
>gi|389876148|ref|YP_006369713.1| PotF [Tistrella mobilis KA081020-065]
gi|388526932|gb|AFK52129.1| PotF [Tistrella mobilis KA081020-065]
Length = 379
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 103/237 (43%), Gaps = 46/237 (19%)
Query: 225 GEIDPR----------GKIWAAPYRWGTMAIGY--KKSKFQNHNLAPIEDWKDPWWPELA 272
G +DP+ G PY WGT IGY K K + AP++ W+ + PE+
Sbjct: 118 GNLDPKLMARVAKYDPGNEHLVPYMWGTTGIGYNVKMVKERLGENAPLDSWRLIFDPEVV 177
Query: 273 GR-----ISMVNSPREVIVA----------GGKIA----VQQNLALLANQVRLFDSTHYL 313
+ +S+++SP E A G K+ V + + +R F ++ Y+
Sbjct: 178 SKLADCGVSVMDSPDETFPAMLNYLGLDPDGHKVEDVDKVAEAYMKIRPHIRKFHNSQYI 237
Query: 314 KAFGIGDVWVAVGWSSDVLPAVKRM------SNVAVVVPKSGASLWADLWAIPA-ASRLE 366
G+V VA+G+S D+L A R + + V+P GA LW D+ AIPA A E
Sbjct: 238 NDLANGEVCVAMGYSGDILQARDRAQEADNGNEIVYVIPSEGAQLWFDMLAIPADAPHPE 297
Query: 367 TKQIG-GQVRGP--SPLIHQWIEFCLQTARALPFKQEVI---PGASPSALESTLVKL 417
+ P + I ++ + A+A P E + PG PS E T+ +L
Sbjct: 298 NAHTFINYILEPKVTAAISDYVAYANANAKATPLVSEDVRNDPGIYPS--EETMNRL 352
>gi|328545139|ref|YP_004305248.1| ABC transporter polyamine transport protein, periplasmic protein
[Polymorphum gilvum SL003B-26A1]
gi|326414881|gb|ADZ71944.1| ABC transporter, polyamine transport protein, periplasmic protein
[Polymorphum gilvum SL003B-26A1]
Length = 362
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 114/263 (43%), Gaps = 44/263 (16%)
Query: 139 RVVSLQN---SVPQSWVKDFMRSQGKRLKFQMNLCASI-------DGIVNNLSTPFNKLS 188
RVV++ N + +S ++DF + G R+ + + I G ++ P
Sbjct: 24 RVVNVYNWSDYIDESILEDFTKETGIRVVYDVFDSNEILETKLLAGGTGYDIVVPTGTF- 82
Query: 189 FAIKKRFIEPIAEAEDQDWFKRLSHKWK-VYLRSNDAGEIDPRGKIWAAPYRWGTMAIGY 247
+ ++ + + D+ L H W + R + DP G +A Y WGT IGY
Sbjct: 83 --LGRQIQAGVFQKLDKSKLPNLVHMWDDIEARLQ---KYDP-GNEYAINYMWGTTGIGY 136
Query: 248 KKSKFQN-HNLAPIEDWKDPWWPELAGR-----ISMVNSPREVIVAG------------- 288
K AP+ W + ++ + I ++++P E+I A
Sbjct: 137 NVEKITAIMPDAPVGSWDMVFNKDIVSKFAECGIFVLDTPEEMIPAALNYLGLDPDSNET 196
Query: 289 GKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS----NVAV 343
G I L L + +R F S+ Y+ A GD+ +AVGWS D+L A R + NV V
Sbjct: 197 GDIEKAGELLLSIRPHIRKFHSSEYINALANGDICLAVGWSGDILQARDRAAEAGNNVTV 256
Query: 344 --VVPKSGASLWADLWAIPAASR 364
V+PK GA +W D AIPA +R
Sbjct: 257 EYVIPKEGALMWFDNMAIPADAR 279
>gi|423509201|ref|ZP_17485732.1| hypothetical protein IG3_00698 [Bacillus cereus HuA2-1]
gi|402456492|gb|EJV88265.1| hypothetical protein IG3_00698 [Bacillus cereus HuA2-1]
Length = 349
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 64/152 (42%), Gaps = 19/152 (12%)
Query: 227 IDPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVIV 286
DP K ++ Y WG I Y K + AP W D W + G ++++N REV+
Sbjct: 120 FDPENK-YSLVYTWGVTGIAYNKKYVKE---APTS-WNDLWNDKYKGHVTLLNDSREVLG 174
Query: 287 AGGKI--------------AVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVL 332
G K +L L + FD+ + + F D W+ WS D
Sbjct: 175 MGLKKNGFSNSTKEDAQLKTASNDLQKLLPNLLAFDTDNIKQKFITADAWIGTVWSGDAA 234
Query: 333 PAVKRMSNVAVVVPKSGASLWADLWAIPAASR 364
K +V VVPK G ++WAD AIP ++
Sbjct: 235 FIAKDNKDVGYVVPKEGGTIWADTLAIPKGAK 266
>gi|419955798|ref|ZP_14471920.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas stutzeri TS44]
gi|387967394|gb|EIK51697.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas stutzeri TS44]
Length = 365
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 95/218 (43%), Gaps = 41/218 (18%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPE-----LAGRISMVNS 280
DP G +A PY WGT+ IGY K + + AP++ W + PE A +S ++S
Sbjct: 120 DP-GNQYAIPYMWGTIGIGYNVDKVKAVLGDNAPVDSWDLVFKPENIEKLKACGVSFLDS 178
Query: 281 PREVIVAG----------GKIAVQQNLALLANQVR----LFDSTHYLKAFGIGDVWVAVG 326
P E++ A K A + L Q+R F S+ Y+ G+V VA+G
Sbjct: 179 PTEILPAALHYLGYAPDSDKTAELKKAEELFLQIRPHVAYFHSSKYISDLANGNVCVAIG 238
Query: 327 WSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIPA-ASRLETKQI------GGQ 373
+S D+ A R V +PK GA + D+ AIPA A ++ + +
Sbjct: 239 YSGDIYQAKARAEEAKNGVKVGYKIPKEGAGSFFDMVAIPADAKNVDNAHVFINYLLKPE 298
Query: 374 VRGPSPLIHQWIEFCLQTARALPFKQEVI---PGASPS 408
V P I +++F A A P E I PG PS
Sbjct: 299 VMAP---IVNYVQFPSANAAATPLVDEAIRTDPGIYPS 333
>gi|310659049|ref|YP_003936770.1| polyamine transporter subunit ; periplasmic-binding component of
ABC superfamily [[Clostridium] sticklandii]
gi|308825827|emb|CBH21865.1| polyamine transporter subunit ; periplasmic-binding component of
ABC superfamily [[Clostridium] sticklandii]
Length = 345
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 99/221 (44%), Gaps = 38/221 (17%)
Query: 234 WAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVI-VAGGKIA 292
++ PY WGTM I Y K+K + ++ W W P+ G+I M++SPR+ I + K+
Sbjct: 124 YSVPYLWGTMGIVYNKTKVSD----SVDSWDILWNPKYEGQIIMLDSPRDTIGITLKKLG 179
Query: 293 VQQNL-----------ALLANQ--VRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS 339
N AL+ + VR ++ Y G+ +++ WS D + +
Sbjct: 180 YSLNTKNPAELEEAKQALIEQKKLVRSYEVDTYKGQMIAGEAAMSLAWSGDAMLLMSENE 239
Query: 340 NVAVVVPKSGASLWADLWAIP-AASRLETKQIGGQVRGPSPLIHQWIEFCLQTARALPFK 398
++A +PK G +LW D AIP A+ E +I +I F ++ A
Sbjct: 240 DLAYAIPKEGTNLWFDCMAIPTTAAHKEEAEI-------------FINFMMRPDIAAR-N 285
Query: 399 QEVIPGASPSALESTLVKLPEELLKGK---PSVDTNLIAGV 436
E I ++P+ E+ L LPEE + + P D N + V
Sbjct: 286 SEYIKYSTPN--EAALELLPEEEVNNEYLYPKGDLNKLGEV 324
>gi|393765753|ref|ZP_10354314.1| extracellular solute-binding protein [Methylobacterium sp. GXF4]
gi|392728989|gb|EIZ86293.1| extracellular solute-binding protein [Methylobacterium sp. GXF4]
Length = 394
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 74/160 (46%), Gaps = 28/160 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQNH--NLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP G +A Y WGT IGY + + A + W P A + I M++S
Sbjct: 149 DP-GNTYAVDYMWGTTGIGYNVAAVRERLGANAALNSWTVVLNPASANKLKDCGIMMLDS 207
Query: 281 PREVI-----VAGGK---------IAVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVG 326
P ++I V G K V L + VR F ++ Y++A GD+ VAVG
Sbjct: 208 PEDLIPSMLPVFGAKADSKRWDDLTLVTDALYKVRGSVRKFHASEYIQALANGDICVAVG 267
Query: 327 WSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIP 360
+S DV+ A +R +A VVPK GA +W D +AIP
Sbjct: 268 YSGDVMQAKRRAEEAKNGIEIAYVVPKEGALMWFDTFAIP 307
>gi|398904320|ref|ZP_10652192.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM50]
gi|398175972|gb|EJM63708.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM50]
Length = 365
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 91/327 (27%), Positives = 140/327 (42%), Gaps = 54/327 (16%)
Query: 138 LRVVSLQNSVPQSWVKDFMRSQGKRLKF---------QMNLCASIDGIVNNLSTPFNK-L 187
LRV + + + VK F G R+ + + L A G ++ P N L
Sbjct: 28 LRVYNWSDYIAPDTVKKFEDETGIRVTYDVFDSNETLEARLLAGKSGY--DIVVPSNSFL 85
Query: 188 SFAIKKRFIEPIAEAEDQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIGY 247
+ IK +P+ +++ +W K L+ V L++ A DP G A PY WG++ IGY
Sbjct: 86 AKQIKAGVYQPLDKSKLPNW-KNLN---PVLLKNASAS--DP-GNSHAFPYMWGSIGIGY 138
Query: 248 KKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNSPREVIVAG----GKIAVQQN 296
+K + AP+ W + PE A + IS ++SP E++ A G Q+
Sbjct: 139 NPAKVKEVLGTDAPVNSWDLLFKPENAAKLKACGISFLDSPTEMLPAALHYLGYPVNSQD 198
Query: 297 LALLAN----------QVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSN------ 340
A +A V F S+ Y+ G++ VAVG+S DVL A R
Sbjct: 199 KAQIAEAEALFMKIRPSVAYFHSSKYISDLANGNICVAVGYSGDVLQAKARAKEAGDKVK 258
Query: 341 VAVVVPKSGASLWADLWAIP--AASRLETKQIGGQVRGPSPL--IHQWIEFCLQTARALP 396
V +PK GA + D+ AIP AA+ + P + + I + A A P
Sbjct: 259 VEYSIPKEGAGSFYDMVAIPRDAANVDNAYLFMNFLMRPDIIAEVTNNIGYSNANAAATP 318
Query: 397 FKQEVI---PGAS-PSALESTLVKLPE 419
E I PG+ P A+ +TL +P+
Sbjct: 319 LVDEAIRDDPGSYPPQAVMATLYAIPD 345
>gi|357026312|ref|ZP_09088415.1| family 1 extracellular solute-binding protein [Mesorhizobium
amorphae CCNWGS0123]
gi|355541823|gb|EHH10996.1| family 1 extracellular solute-binding protein [Mesorhizobium
amorphae CCNWGS0123]
Length = 365
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 80/184 (43%), Gaps = 29/184 (15%)
Query: 204 DQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIGYKKSKFQNH-NLAPIED 262
D+ +S+ W L + DP G ++ Y WGT+ IGY K Q I+
Sbjct: 99 DKSKLPNISNMWDTVLERT--AKYDP-GNEYSINYMWGTVGIGYNIKKVQAALGTDKIDS 155
Query: 263 WKDPWWPELAGR-----ISMVNSPREVIVAGGKI--------------AVQQNLALLANQ 303
W + PE + + +++SP ++I A K ++ L +
Sbjct: 156 WDAFFNPESLAKLKDCGVYVLDSPADIIPAALKYLGLDPNSTSPDDIAKAEETLLKIRPY 215
Query: 304 VRLFDSTHYLKAFGIGDVWVAVGWSSDVLPA------VKRMSNVAVVVPKSGASLWADLW 357
+R F S+ Y+ A GD+ +AVGWS DV A K+ + VPK GA +W D
Sbjct: 216 IRKFHSSEYINALANGDICLAVGWSGDVFQARNRAVEAKQGVEIGYAVPKEGAQMWFDQM 275
Query: 358 AIPA 361
AIPA
Sbjct: 276 AIPA 279
>gi|254469276|ref|ZP_05082681.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudovibrio sp. JE062]
gi|211961111|gb|EEA96306.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudovibrio sp. JE062]
Length = 368
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 113/258 (43%), Gaps = 43/258 (16%)
Query: 138 LRVVSLQNSVPQSWVKDFMRSQGKRLKF---------QMNLCASIDGIVNNLSTPFNKLS 188
+ V + + + +S +KDF G ++ + + L A G ++ P
Sbjct: 32 VNVYNWSDYIDESVLKDFEAETGIKVNYDVFDSNEVLETKLLAGTTGY--DIVVPTGSF- 88
Query: 189 FAIKKRFIEPIAEAEDQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIGYK 248
+ ++ + + D++ L + W V S+ DP G ++ Y WGT IGY
Sbjct: 89 --LSRQIQAGVFQKLDKNALPNLKNMWSVV--SDRTSIYDP-GNDYSINYMWGTTGIGYN 143
Query: 249 -KSKFQNHNLAPIEDWKDPWWPELAGR-----ISMVNSPREVIVAG-----------GKI 291
++ + + P++ W+ + P++ + I M+++P E+I A K
Sbjct: 144 VEAAAKRLDGKPVDSWEIIFNPDILAKFQDCGIHMLDAPTELIPAALNHLGLNPDSHDKA 203
Query: 292 AVQQNLALLAN---QVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVA 342
+++ LL V+ F S+ Y+ A GD+ +A+GWS DV A R + V
Sbjct: 204 DIEKAAELLKTIRPYVQKFHSSEYINALANGDICLAIGWSGDVFQARDRAAEADNGVTVN 263
Query: 343 VVVPKSGASLWADLWAIP 360
++PK GA +W D AIP
Sbjct: 264 YIIPKEGALMWFDQMAIP 281
>gi|426409667|ref|YP_007029766.1| putrescine ABC transporter substrate-binding protein [Pseudomonas
sp. UW4]
gi|426267884|gb|AFY19961.1| putrescine ABC transporter substrate-binding protein [Pseudomonas
sp. UW4]
Length = 362
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 74/180 (41%), Gaps = 32/180 (17%)
Query: 208 FKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIGYKKSKFQN-HNLAPIEDWKDP 266
FK L K L ND G + PY WGT IGY K + + I+ W
Sbjct: 103 FKNLDPKLLALLEKNDPGNAH------SVPYLWGTNGIGYNVDKVKAVLGIDKIDSWAVL 156
Query: 267 WWPE-----LAGRISMVNSPREVIVAGGKIA--------------VQQNLALLANQVRLF 307
+ PE A +SM++S EV A + L + + F
Sbjct: 157 FEPENIKKLSACGVSMMDSADEVFPAVLNYMGMDPRSENPEDFKKAEAKLLQIRPYITYF 216
Query: 308 DSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPA 361
S+ Y+ GD+ VA G+S DV A R N+A +PK GA+LW DL AIPA
Sbjct: 217 HSSKYVSDLANGDICVAFGYSGDVFQAANRAKEANNGVNIAYAIPKEGANLWFDLLAIPA 276
>gi|398952723|ref|ZP_10674961.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM33]
gi|398154781|gb|EJM43245.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM33]
Length = 362
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 76/180 (42%), Gaps = 32/180 (17%)
Query: 208 FKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIGYKKSKFQN-HNLAPIEDWKDP 266
FK L K L ND G + PY WGT IGY K + + I+ W
Sbjct: 103 FKNLDPKLLALLEKNDPGNAH------SVPYLWGTNGIGYNVDKVKAVLGIDKIDSWAVL 156
Query: 267 WWPE-----LAGRISMVNSPREVIVA----GGKIAVQQN----------LALLANQVRLF 307
+ PE A +SM++S EV A G +N L + + F
Sbjct: 157 FEPENIKKLSACGVSMMDSADEVFPAILNYMGMDPRSENPEDFKKAEAKLLQIRPYITYF 216
Query: 308 DSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPA 361
S+ Y+ GD+ VA G+S DV A R N+A +PK GA+LW DL AIPA
Sbjct: 217 HSSKYVSDLANGDICVAFGYSGDVFQAANRAKEANNGVNIAYAIPKEGANLWFDLLAIPA 276
>gi|13475822|ref|NP_107392.1| ABC transporter substrate-binding protein [Mesorhizobium loti
MAFF303099]
gi|14026581|dbj|BAB53178.1| ABC transporter, periplasmic binding-protein [Mesorhizobium loti
MAFF303099]
Length = 365
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 75/168 (44%), Gaps = 37/168 (22%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQNH-NLAPIEDWKDPWWPELAGR-----ISMVNSP 281
DP G +A Y WGT IGY K + I+ W + PE A + I++V++P
Sbjct: 121 DP-GNEYAVNYMWGTTGIGYNVDKVKAALGDVQIDSWDVLFKPENAAKLKDCGINIVDAP 179
Query: 282 REVIV-------------------AGGKIAVQQNLALLANQVRLFDSTHYLKAFGIGDVW 322
E + AGG I + + + VR F+S+ Y+ GD
Sbjct: 180 EETVAVAMNYLGKDGDSKKKEDLEAGGDIYTK-----IRSYVRTFNSSSYINDLANGDKC 234
Query: 323 VAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
+++GWS DVL A R NV ++P+ G +W D AIPA ++
Sbjct: 235 ISIGWSGDVLQAKNRAKEAKNGVNVEYLIPREGTYMWFDNLAIPADAK 282
>gi|398925198|ref|ZP_10661743.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM48]
gi|398172395|gb|EJM60261.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM48]
Length = 362
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 76/180 (42%), Gaps = 32/180 (17%)
Query: 208 FKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIGYKKSKF-QNHNLAPIEDWKDP 266
FK L K L ND G + PY WGT IGY K Q + I+ W
Sbjct: 103 FKNLDPKLLALLEKNDPGNSH------SVPYLWGTNGIGYNVDKVKQVLGIDHIDSWAVL 156
Query: 267 WWPE-----LAGRISMVNSPREVIVA----GGKIAVQQN----------LALLANQVRLF 307
+ PE A +SM++S EV A G +N L + + F
Sbjct: 157 FEPENIKKLSACGVSMMDSADEVFPAILNYMGMDPRSENPEDFKKAEAKLLAIRPYITYF 216
Query: 308 DSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPA 361
S+ Y+ GD+ VA G+S DV A R N+A +PK GA+LW DL A+PA
Sbjct: 217 HSSKYVSDLANGDICVAFGYSGDVFQAANRAKEAKNGVNIAYAIPKEGANLWFDLLAVPA 276
>gi|407789271|ref|ZP_11136373.1| polyamine transport protein [Gallaecimonas xiamenensis 3-C-1]
gi|407207249|gb|EKE77192.1| polyamine transport protein [Gallaecimonas xiamenensis 3-C-1]
Length = 416
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 97/216 (44%), Gaps = 35/216 (16%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP G A PY WGT IG+ K + AP + W + P+ + +S +++
Sbjct: 171 DP-GNEHAFPYMWGTTGIGFNPDKVKAVLGADAPTDTWALVFDPKYMSKLSQCGVSFLDA 229
Query: 281 PREVIVAG-GKIAVQQN-------------LALLANQVRLFDSTHYLKAFGIGDVWVAVG 326
P E++ A + + N L+ +A V + S+ Y+ GD+ +A+G
Sbjct: 230 PSEILPAALNYLGLNPNSEDPADYAKAEAMLSKVAPYVTYYHSSKYIDDLANGDICIAIG 289
Query: 327 WSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIP--AASRLETKQIGGQVRGPS 378
+S DVL A R V+ V+PK GA +W D+ AIP A + E + + P+
Sbjct: 290 FSGDVLQAATRADEAKNGVQVSYVIPKEGAGMWFDMMAIPVDANNADEAYKFLNYMLEPA 349
Query: 379 PL--IHQWIEFCLQTARALPFKQEVI---PGASPSA 409
+ + ++ + A A P ++ I PG P+A
Sbjct: 350 NIARVSNFVSYANGNAAATPLVEDAIRNNPGVYPTA 385
>gi|423408761|ref|ZP_17385910.1| hypothetical protein ICY_03446 [Bacillus cereus BAG2X1-3]
gi|401657031|gb|EJS74543.1| hypothetical protein ICY_03446 [Bacillus cereus BAG2X1-3]
Length = 349
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 66/152 (43%), Gaps = 19/152 (12%)
Query: 227 IDPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVIV 286
DP K ++ Y WG I Y K + P W+D W + G ++++N REV+
Sbjct: 120 FDPENK-YSLVYTWGVTGIAYNKKYVKE---TPTS-WEDLWNEKYKGHVTLLNDSREVLG 174
Query: 287 AGGKIAVQQN-------LALLANQVR-------LFDSTHYLKAFGIGDVWVAVGWSSDVL 332
G K N L AN ++ FD+ + + F D W+ WS D
Sbjct: 175 MGLKKNGFSNSTKEDAELKTAANDLQKLLPNLLAFDTDNIKQKFITEDAWIGTVWSGDAA 234
Query: 333 PAVKRMSNVAVVVPKSGASLWADLWAIPAASR 364
K +V VVPK G ++WAD AIP ++
Sbjct: 235 FIAKDNKDVGYVVPKEGGTIWADTLAIPKGAK 266
>gi|423460733|ref|ZP_17437530.1| hypothetical protein IEI_03873 [Bacillus cereus BAG5X2-1]
gi|401140786|gb|EJQ48342.1| hypothetical protein IEI_03873 [Bacillus cereus BAG5X2-1]
Length = 349
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 66/152 (43%), Gaps = 19/152 (12%)
Query: 227 IDPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVIV 286
DP K ++ Y WG I Y K + AP W D W + G ++++N REV+
Sbjct: 120 FDPENK-YSLVYTWGVTGIAYNKKYVKE---APTS-WADLWNEKYKGHVTLLNDSREVLG 174
Query: 287 AGGKIAVQQN-------LALLANQVR-------LFDSTHYLKAFGIGDVWVAVGWSSDVL 332
G K N L AN ++ FD+ + + F D W+ WS D
Sbjct: 175 MGLKKHGFSNSTKDDAQLKTAANDLQKLLPNLLAFDTDNIKQKFITEDAWIGTVWSGDAA 234
Query: 333 PAVKRMSNVAVVVPKSGASLWADLWAIPAASR 364
K +V VVPK G ++WAD AIP ++
Sbjct: 235 FIAKDNKDVEYVVPKEGGTIWADTLAIPKGAK 266
>gi|423397904|ref|ZP_17375105.1| hypothetical protein ICU_03598 [Bacillus cereus BAG2X1-1]
gi|401649212|gb|EJS66798.1| hypothetical protein ICU_03598 [Bacillus cereus BAG2X1-1]
Length = 349
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 66/152 (43%), Gaps = 19/152 (12%)
Query: 227 IDPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVIV 286
DP K ++ Y WG I Y K + P W+D W + G ++++N REV+
Sbjct: 120 FDPENK-YSLVYTWGVTGIAYNKKYVKE---TPTS-WEDLWNEKYKGHVTLLNDSREVLG 174
Query: 287 AGGKIAVQQN-------LALLANQVR-------LFDSTHYLKAFGIGDVWVAVGWSSDVL 332
G K N L AN ++ FD+ + + F D W+ WS D
Sbjct: 175 MGLKKNGFSNSTKEDAELKTAANDLQKLLPNLLAFDTDNIKQKFITEDAWIGTVWSGDAA 234
Query: 333 PAVKRMSNVAVVVPKSGASLWADLWAIPAASR 364
K +V VVPK G ++WAD AIP ++
Sbjct: 235 FIAKDNKDVGYVVPKEGGTIWADTLAIPKGAK 266
>gi|299133628|ref|ZP_07026822.1| extracellular solute-binding protein family 1 [Afipia sp. 1NLS2]
gi|298591464|gb|EFI51665.1| extracellular solute-binding protein family 1 [Afipia sp. 1NLS2]
Length = 363
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 118/267 (44%), Gaps = 51/267 (19%)
Query: 139 RVVSLQN---SVPQSWVKDFMRSQGKRLKF---------QMNLCASIDGIVNNLSTPFNK 186
RVV+ N + ++DF R G ++ + + L A G +L P
Sbjct: 24 RVVNFYNWSSYMAPGVLEDFTRETGIKVVYDTFDANETLETRLLAGKSGY--DLVVP--- 78
Query: 187 LSFAIKKRFIEPIAEAEDQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIG 246
++ ++++ + + + D+ L + W + N + DP G ++AA Y WGT IG
Sbjct: 79 TAYFLQRQIVAGVFQKLDKSKLPNLKNAWPEVM--NHLAQYDP-GNLYAANYMWGTTGIG 135
Query: 247 YKKSKFQNHNL----APIEDWKDPWWPELAGR-----ISMVNSPREVIVAGGK-IAVQQN 296
Y S H + A I+ W + PE + I M++S +++ A + + N
Sbjct: 136 YNVSAV--HKILGPNAVIDSWDTIFNPEKIAKFKDCGIHMLDSADDILPAALNWLGLDPN 193
Query: 297 -------------LALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS---- 339
+A + VR F S+ YL A G++ +AVGWS D+ A KR +
Sbjct: 194 STRREDLEKAAEVVAKIRPYVRKFHSSEYLSALATGEICLAVGWSGDIKQAQKRAAESNN 253
Query: 340 --NVAVVVPKSGASLWADLWAIPAASR 364
+A +PK GA ++ D AIP+ ++
Sbjct: 254 GVEIAYAIPKEGAQMFFDNLAIPSDAK 280
>gi|27378917|ref|NP_770446.1| substrate-binding protein [Bradyrhizobium japonicum USDA 110]
gi|27352067|dbj|BAC49071.1| blr3806 [Bradyrhizobium japonicum USDA 110]
Length = 374
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 93/205 (45%), Gaps = 32/205 (15%)
Query: 188 SFAIKKRFIEPIAEAEDQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIGY 247
++ ++++ I + D+ LSH W V + G DP G ++AA Y WGT IGY
Sbjct: 91 AYFLQRQIKANIFQKLDKSRLPNLSHAWPVVTQR--LGIYDP-GNVYAANYMWGTTGIGY 147
Query: 248 KKSKFQNHNLAP---IEDWKDPWWPELAGR-----ISMVNSPREVIVAG-GKIAVQQN-- 296
+K + L P I+ W + PE + + M++S ++ A + + N
Sbjct: 148 NVAKVK-QILGPDAKIDSWDIVFKPENLAKFKDCGVHMLDSADDIFPAALSYLGLDPNST 206
Query: 297 -----------LALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------ 339
+A + VR F S+ YL A G++ VGWS D++ A R +
Sbjct: 207 KQADLEKAADAVAKVRPSVRKFHSSEYLSALATGEICFVVGWSGDIMQARARAAEAKSGV 266
Query: 340 NVAVVVPKSGASLWADLWAIPAASR 364
+ +PK GA ++ D AIPA ++
Sbjct: 267 EIGYTIPKEGAQMFFDNLAIPADAK 291
>gi|149377228|ref|ZP_01894976.1| extracellular solute-binding protein, family 1 [Marinobacter
algicola DG893]
gi|149358527|gb|EDM47001.1| extracellular solute-binding protein, family 1 [Marinobacter
algicola DG893]
Length = 368
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 78/171 (45%), Gaps = 30/171 (17%)
Query: 222 NDAGEIDPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR----- 274
+D ++DP G ++ PY WGT GY + + Q+ + AP + W + PE+ G+
Sbjct: 115 DDLEKVDP-GSQFSLPYLWGTNGYGYNEGRIQDILGDSAPTDSWALVFDPEVTGKLSAGG 173
Query: 275 --ISMVNSPREVIVAG-GKIAVQQN-------------LALLANQVRLFDSTHYLKAFGI 318
I+M++S E++ A I + N + + F S+ Y+
Sbjct: 174 CGIAMLDSGEEMVRAAMAYIGLNPNSNNAEDIKKGGEVIKATRPNITYFHSSRYIADLAN 233
Query: 319 GDVWVAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIPAAS 363
GD+ VA G+S D+L A R + +PK GA LW D+ IPA +
Sbjct: 234 GDLCVAAGYSGDILQAAARAEEAGNGNVIRYTIPKEGAVLWFDMMTIPAGA 284
>gi|398873539|ref|ZP_10628794.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM74]
gi|398199204|gb|EJM86149.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM74]
Length = 362
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 74/180 (41%), Gaps = 32/180 (17%)
Query: 208 FKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIGYKKSKFQN-HNLAPIEDWKDP 266
FK L K L ND G + PY WGT IGY K + + I+ W
Sbjct: 103 FKNLDPKLLALLEKNDPGNSH------SVPYLWGTNGIGYNVDKVKAVLGIDKIDSWAVL 156
Query: 267 WWPE-----LAGRISMVNSPREVIVAGGKIA--------------VQQNLALLANQVRLF 307
+ PE A +SM++S EV A + L + + F
Sbjct: 157 FEPENIKKLSACGVSMMDSADEVFPAMLNYMGMDPRSENPEDFKKAEAKLLQIRPYITYF 216
Query: 308 DSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPA 361
S+ Y+ GD+ VA G+S DV A R N+A +PK GA+LW DL AIPA
Sbjct: 217 HSSKYVSDLANGDICVAFGYSGDVFQAANRAKEANNGVNIAYAIPKEGANLWFDLLAIPA 276
>gi|374703154|ref|ZP_09710024.1| extracellular solute-binding protein [Pseudomonas sp. S9]
Length = 364
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 93/214 (43%), Gaps = 34/214 (15%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQNH-NLAPIEDWKDPWWPELAGR-----ISMVNSP 281
DP G +A PY WGT IGY K + + I+ W + PE + +SM+++P
Sbjct: 120 DP-GNQYAFPYLWGTTGIGYNPEKVKAALGIDKIDSWDIIFKPENMDKLKSCGVSMLDAP 178
Query: 282 REVIVAG----GKIAVQQNLALLAN----------QVRLFDSTHYLKAFGIGDVWVAVGW 327
EV A G + Q++ + V F S+ Y+ G++ VA+GW
Sbjct: 179 EEVYAAALHYLGLNPIAQSVEDVKKAEELLLKVRPDVTYFHSSKYISDLANGNICVALGW 238
Query: 328 SSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIPAASRL--ETKQIGGQVRGPSP 379
S DV A R V+ V+PK GA+ + D+ AIPA ++ E + P
Sbjct: 239 SGDVFQAEARAEEAKNGVPVSYVIPKEGAAAFFDMMAIPADAKNADEAYTFLNYILKPEV 298
Query: 380 L--IHQWIEFCLQTARALPFKQEVI---PGASPS 408
+ I ++ + A A P E I PG P+
Sbjct: 299 IAPISDYVAYPNGNAAATPLVSEEIRNNPGIYPT 332
>gi|392423252|ref|YP_006459856.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas stutzeri CCUG 29243]
gi|390985440|gb|AFM35433.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas stutzeri CCUG 29243]
Length = 365
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 97/218 (44%), Gaps = 36/218 (16%)
Query: 227 IDPR--GKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISM 277
+DP G ++ PY WGT+ IGY K + + AP++ W + PE + +S
Sbjct: 116 LDPSDPGNQYSIPYMWGTIGIGYNVDKVKAVLGDNAPVDSWDLVFKPENIEKLKSCGVSF 175
Query: 278 VNSPREVIVAG----------GKIAVQQNLALLANQVR----LFDSTHYLKAFGIGDVWV 323
++SP E++ A GK + L Q+R F S+ Y+ G+ V
Sbjct: 176 LDSPTEILPAALHYLGYAPDSGKADELKKAEELFMQIRPHVAYFHSSKYISDLANGESCV 235
Query: 324 AVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPA-ASRLETKQIG-GQVR 375
A+G+S D+ A R NV +PK GA + D+ A+PA A +E+ + +
Sbjct: 236 AIGYSGDIYQAKARAEEAGNGVNVGYKIPKEGAGSFFDMLAVPADAKNVESAHVFINYLM 295
Query: 376 GPSPL--IHQWIEFCLQTARALPFKQEVI---PGASPS 408
P + I +++F A A P E I PG P+
Sbjct: 296 KPEVMASITDYVQFPNGNAAATPLVDEAIRTDPGIYPN 333
>gi|229160340|ref|ZP_04288338.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
R309803]
gi|228623064|gb|EEK79892.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
R309803]
Length = 349
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 65/152 (42%), Gaps = 19/152 (12%)
Query: 227 IDPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVIV 286
DP K ++ Y WG I Y K + P W D W + G ++++N REV+
Sbjct: 120 FDPENK-YSLVYTWGVTGIAYNKKYVKE---VPTS-WADLWNEKYKGHVTLLNDSREVLG 174
Query: 287 AGGK-------IAVQQNLALLANQVR-------LFDSTHYLKAFGIGDVWVAVGWSSDVL 332
G K V L +N ++ FD+ + + F D W+ WS D
Sbjct: 175 MGLKKNGFSNSTKVDAELKTASNDLQKLLPNLLAFDTDNIKQKFITEDAWIGTVWSGDAA 234
Query: 333 PAVKRMSNVAVVVPKSGASLWADLWAIPAASR 364
K +V VVPK G ++WAD AIP ++
Sbjct: 235 FIAKDNKDVGYVVPKEGGTIWADTLAIPKGAK 266
>gi|154246279|ref|YP_001417237.1| extracellular solute-binding protein [Xanthobacter autotrophicus
Py2]
gi|154160364|gb|ABS67580.1| extracellular solute-binding protein family 1 [Xanthobacter
autotrophicus Py2]
Length = 368
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 72/161 (44%), Gaps = 31/161 (19%)
Query: 235 AAPYRWGTMAIGYKKSKFQNH-NLAPIEDWKDPWWPELAGR-----ISMVNSPREVIVAG 288
A Y WGT IGY K + P+ W + PE+ + + ++ P EVI +
Sbjct: 125 AVNYMWGTTGIGYNVDKVKERLGDIPMNTWDIVFKPEILSKLKDCGVYFLDGPEEVIPSA 184
Query: 289 GK-------------IAVQQNLALLAN-QVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPA 334
K IA L + ++ FDS+ Y+ A GD+ +AVGWS DV A
Sbjct: 185 MKYLGLDPNSKNPDDIAKAGELLMSVRPYIKKFDSSGYINALARGDICLAVGWSGDVFQA 244
Query: 335 VKRMS-----------NVAVVVPKSGASLWADLWAIPAASR 364
R + NVA V+PK GA +W D +AIP ++
Sbjct: 245 KTRAAEAAKKTKKPPVNVAYVIPKQGALMWFDNFAIPKDAK 285
>gi|386814709|ref|ZP_10101927.1| extracellular solute-binding protein family 1 [Thiothrix nivea DSM
5205]
gi|386419285|gb|EIJ33120.1| extracellular solute-binding protein family 1 [Thiothrix nivea DSM
5205]
Length = 344
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 109/245 (44%), Gaps = 43/245 (17%)
Query: 147 VPQSWVKDFMRSQGKRLKFQMNLCASIDGIVNNLSTPFNKLSFAIKKRF--IEP----IA 200
+P+S ++DF + G ++++ +N T ++KL K + + P ++
Sbjct: 34 IPESTLEDFTQETGIKVEYS---------TYDNNETMYSKLKLQKGKGYDIVVPSTYLVS 84
Query: 201 EAEDQDWFKRLSHKWKVYLRSNDAGEI-------DPRGKIWAAPYRWGTMAIGYKKSKFQ 253
+ D+ +++ H L++ D I DPR + ++ PY WG+ IG +
Sbjct: 85 KMRDEGLLQKIDH---TKLKNVDNLSISLMNKPYDPRNE-YSIPYLWGSTGIGVNAKEI- 139
Query: 254 NHNLAPIEDWKDPWWPELAGRISMVNSPREVIVAGGKI--------------AVQQNLAL 299
+ A I W D W P+ G++ + + REV K A ++L
Sbjct: 140 --DPATITAWADLWDPKWEGKLLLTDDVREVFHMALKKNGFSTNSTNPDEIKAAYEDLQK 197
Query: 300 LANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAI 359
L V +F++ + F GDV + + WS +V+ A + ++ + PK GA W D +AI
Sbjct: 198 LMPNVLVFNADAPREPFLAGDVNLGMIWSGEVVMAQEENPDIQYIFPKEGAGFWVDSFAI 257
Query: 360 PAASR 364
PA +
Sbjct: 258 PAGAE 262
>gi|94499306|ref|ZP_01305844.1| polyamine ABC transporter, periplasmic polyamine-binding protein
[Bermanella marisrubri]
gi|94428938|gb|EAT13910.1| polyamine ABC transporter, periplasmic polyamine-binding protein
[Oceanobacter sp. RED65]
Length = 361
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 83/187 (44%), Gaps = 39/187 (20%)
Query: 231 GKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNSPRE 283
G + PY+WGT IGY +K + AP + W + P+ + + IS+++S E
Sbjct: 120 GNEYGVPYQWGTTGIGYNVAKVEAILGEKAPTDSWDLIFDPKYSSKLKECGISVLDSAGE 179
Query: 284 VI--------------VAGGKIAVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSS 329
V+ G ++ + + + +R F S+ Y+ GD+ VA+GWS
Sbjct: 180 VLPLVLNYLGLDPNSKNKGDYDKAEEKMLSIRDNIRYFHSSRYISDLANGDLCVAIGWSG 239
Query: 330 DVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASRLETKQIGGQVRGPSPLIHQ 383
DV A R +A +PK G ++W+D+ AIP ++ +Q H+
Sbjct: 240 DVFQAAARAEEAENGVEIAYYIPKEGTAMWSDMMAIPKDAK-NVEQ-----------AHK 287
Query: 384 WIEFCLQ 390
WI + L
Sbjct: 288 WINYILD 294
>gi|374855306|dbj|BAL58166.1| extracellular solute-binding protein [uncultured candidate division
OP1 bacterium]
Length = 352
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 81/182 (44%), Gaps = 37/182 (20%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPE----LAGRISMVNSPRE 283
DP+ + ++ PY WGT IGY K + P W D + P+ R+SM++ PRE
Sbjct: 122 DPQNR-YSIPYLWGTTGIGYNAQKLE----TPPTSWADLFEPDRLERYKNRVSMLDDPRE 176
Query: 284 VIVAGGK-------------IAVQQNLALLAN-QVRLFDSTHYLKAFGIGDVWVAVGWSS 329
I A K + +NL L+ + +DS Y GD+ VA GWS
Sbjct: 177 AIGAALKYLGYSVNSTDPQQLEAAKNLLLVQKPYLARYDSETYDDFLLTGDLVVAHGWSG 236
Query: 330 DVLPAVKRMSNVAVVVPKSGASLWADLWAIPAAS-RLETKQIGGQVRGPSPLIHQWIEFC 388
+ A N+ V+P+ G +WAD AI +S R++ L H +I+F
Sbjct: 237 EFAKAHVENPNIRYVIPREGGVIWADNLAILKSSQRID-------------LAHTFIDFL 283
Query: 389 LQ 390
L+
Sbjct: 284 LR 285
>gi|423366876|ref|ZP_17344309.1| hypothetical protein IC3_01978 [Bacillus cereus VD142]
gi|401086856|gb|EJP95075.1| hypothetical protein IC3_01978 [Bacillus cereus VD142]
Length = 349
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 64/152 (42%), Gaps = 19/152 (12%)
Query: 227 IDPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVIV 286
DP K ++ Y WG I Y K + AP W D W + G ++++N REV+
Sbjct: 120 FDPENK-YSLVYTWGVTGIAYNKKYVKE---APTS-WNDLWNEKYKGHVTLLNDSREVLG 174
Query: 287 AGGKI--------------AVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVL 332
G K +L L + FD+ + + F D W+ WS D
Sbjct: 175 MGLKKNGFSNSTKEDAQLKTASADLQKLLPNLLAFDTDNIKQKFITADAWIGTVWSGDAA 234
Query: 333 PAVKRMSNVAVVVPKSGASLWADLWAIPAASR 364
K ++ VVPK G ++WAD AIP ++
Sbjct: 235 FIAKDNKDIEYVVPKEGGTIWADTLAIPKGAK 266
>gi|339492154|ref|YP_004712447.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas stutzeri ATCC 17588 = LMG 11199]
gi|338799526|gb|AEJ03358.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas stutzeri ATCC 17588 = LMG 11199]
Length = 361
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 76/166 (45%), Gaps = 28/166 (16%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQNH-NLAPIEDWKDPWWPELAGR-----ISMVNSP 281
DP G AAPY WGT IGY K + ++ I+ W + PE A + I+ ++S
Sbjct: 117 DP-GNAHAAPYLWGTNGIGYNVEKVKAALSVDKIDSWSVLFEPENAQKLASCGIAFLDSA 175
Query: 282 REVI--------------VAGGKIAVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGW 327
E+I A ++ L + VR F S+ Y+ G++ VA G+
Sbjct: 176 DEMIPAMLNYLGLDPNSENAADYQKAEEKLLAVRPHVRYFHSSKYISDLANGNICVAAGF 235
Query: 328 SSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIPA-ASRLE 366
S DV A R +A +PK G +LW D+ AIPA AS +E
Sbjct: 236 SGDVFQAAARAEEAGKGIEIAYAIPKEGGNLWFDMLAIPADASNVE 281
>gi|383190431|ref|YP_005200559.1| spermidine/putrescine-binding periplasmic protein [Rahnella
aquatilis CIP 78.65 = ATCC 33071]
gi|371588689|gb|AEX52419.1| spermidine/putrescine-binding periplasmic protein [Rahnella
aquatilis CIP 78.65 = ATCC 33071]
Length = 369
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 74/165 (44%), Gaps = 29/165 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP G +A PY W T IGY K + AP++ W PE + +S +++
Sbjct: 123 DP-GNKYAIPYLWATTGIGYNVDKVKAVLGKDAPVDSWDLVLKPENLEKLKSCGVSFLDA 181
Query: 281 PREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAV 325
P E+ A +L L L +R F S+ Y+ GD+ VA+
Sbjct: 182 PAEIYATVLNYLHLDPNSTKASDYTGAANDLLLKLRPNIRYFHSSQYINDLANGDICVAI 241
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
GW+ DV+ A R NVA +PK GA + D++AIPA ++
Sbjct: 242 GWAGDVMQAANRAKEAKNGVNVAYSIPKEGALAFFDVFAIPADAK 286
>gi|284047717|ref|YP_003398056.1| extracellular solute-binding protein [Acidaminococcus fermentans
DSM 20731]
gi|283951938|gb|ADB46741.1| extracellular solute-binding protein family 1 [Acidaminococcus
fermentans DSM 20731]
Length = 353
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 65/153 (42%), Gaps = 19/153 (12%)
Query: 226 EIDPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVI 285
+ DPRG+ ++ Y WG I Y K + P W D W P GR+ ++N REV
Sbjct: 124 QFDPRGE-YSVVYTWGMTGIIYNKKYVK----TPPTSWNDLWDPAYKGRVILLNDSREVF 178
Query: 286 VAGGK--------------IAVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDV 331
K Q+L LA V +D+ + F + W+ WS D
Sbjct: 179 GMALKKNGWSNNSTDPDQLAKAFQDLKELAPSVLAYDTDSLKQKFIAEEGWIGTMWSGDA 238
Query: 332 LPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 364
+ + N+ V+PK G +WAD AIP ++
Sbjct: 239 SFSYRENPNLGFVIPKEGTLVWADTLAIPKGAK 271
>gi|423420670|ref|ZP_17397759.1| hypothetical protein IE3_04142 [Bacillus cereus BAG3X2-1]
gi|401101237|gb|EJQ09228.1| hypothetical protein IE3_04142 [Bacillus cereus BAG3X2-1]
Length = 349
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 64/152 (42%), Gaps = 19/152 (12%)
Query: 227 IDPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVIV 286
DP K ++ Y WG I Y K + AP W D W + G ++++N REV+
Sbjct: 120 FDPENK-YSLVYTWGVTGIAYNKKYVKE---APTS-WNDLWNEKYKGHVTLLNDSREVLG 174
Query: 287 AGGKI--------------AVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVL 332
G K +L L + FD+ + + F D W+ WS D
Sbjct: 175 MGLKKNGFSNSTKEDAQLKTASADLQKLLPNLLAFDTDNIKQKFITEDAWIGTVWSGDAA 234
Query: 333 PAVKRMSNVAVVVPKSGASLWADLWAIPAASR 364
K +V VVPK G ++WAD AIP ++
Sbjct: 235 FIAKDNKDVEYVVPKEGGTIWADTLAIPKGAK 266
>gi|170747368|ref|YP_001753628.1| extracellular solute-binding protein [Methylobacterium
radiotolerans JCM 2831]
gi|170653890|gb|ACB22945.1| extracellular solute-binding protein family 1 [Methylobacterium
radiotolerans JCM 2831]
Length = 375
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 74/160 (46%), Gaps = 28/160 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQNH--NLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP G +A Y WGT IGY + + A + W P A + I M++S
Sbjct: 130 DP-GNTYAVDYMWGTTGIGYNVAAVRERLGANATVNSWSVVLNPASANKLKECGIMMLDS 188
Query: 281 PREVI-----VAGGK---------IAVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVG 326
P ++I G K V L + VR F S+ Y++A GD+ +AVG
Sbjct: 189 PEDLIPSMLPAFGAKADSKRWDDMTLVTDALYKVRGAVRKFHSSEYIQALANGDICLAVG 248
Query: 327 WSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIP 360
+S D++ A +R ++A VVPK GA +W D +AIP
Sbjct: 249 YSGDIMQAKRRAEEAKNGIDIAYVVPKEGALMWFDTFAIP 288
>gi|153011248|ref|YP_001372462.1| extracellular solute-binding protein [Ochrobactrum anthropi ATCC
49188]
gi|404318174|ref|ZP_10966107.1| extracellular solute-binding protein [Ochrobactrum anthropi
CTS-325]
gi|151563136|gb|ABS16633.1| extracellular solute-binding protein family 1 [Ochrobactrum
anthropi ATCC 49188]
Length = 367
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 115/270 (42%), Gaps = 42/270 (15%)
Query: 131 TYALTVPLRVVSLQN---SVPQSWVKDFMRSQGKRLKFQMNLCASI-------DGIVNNL 180
T++ + RVV++ N + S +KDF + G ++ + + I G +L
Sbjct: 21 TFSASAQERVVNIYNWSDYIDDSILKDFTKETGIKVVYDVYDSNEILETKLLAGGSGYDL 80
Query: 181 STPFNKLSFAIKKRFIEPIAEAEDQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRW 240
P + + ++ + D+D L + W SN A DP G ++ Y W
Sbjct: 81 VVPSGEF---LGRQIPAGVFLKLDKDKLPNLKNMWDEI--SNRAATYDP-GNEYSVNYMW 134
Query: 241 GTMAIGYKKSKFQNH-NLAPIEDWKDPWWPELAGR-----ISMVNSPREVIVAG------ 288
GT IGY K+K + I+ W + PE + + I +++S E++
Sbjct: 135 GTTGIGYNKAKIKEALGTDTIDSWDVLFDPEKSAKLKGCGIYLLDSASEMLRPALNYLGL 194
Query: 289 -------GKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS- 339
+ Q+L L + +R F S+ Y+ A GD+ +A+G+S D+ A R
Sbjct: 195 DPNSPSPDDLQKAQDLYLKIRPNIRKFHSSEYINALANGDICMAIGYSGDIFQARDRAEK 254
Query: 340 -----NVAVVVPKSGASLWADLWAIPAASR 364
+ +PK GA +W D AIPA ++
Sbjct: 255 AKQGVEIGYSIPKEGALIWFDQMAIPADAK 284
>gi|423203722|ref|ZP_17190290.1| hypothetical protein HMPREF1167_03873 [Aeromonas veronii AER39]
gi|404612500|gb|EKB09561.1| hypothetical protein HMPREF1167_03873 [Aeromonas veronii AER39]
Length = 361
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 90/207 (43%), Gaps = 31/207 (14%)
Query: 226 EIDPRGKIWAAPYRWGTMAIGYKKSKFQN-HNLAPIEDWKDPWWPELAGRIS-----MVN 279
++DP G +A PY WGT IGY K + + I+ W + PE ++S ++
Sbjct: 115 KVDP-GHQYAVPYLWGTNGIGYNVDKIKAVLGVDKIDSWATIFEPENMAKLSRCGVAFLD 173
Query: 280 SPREVIVAG-----------GKIAVQQNLALLAN---QVRLFDSTHYLKAFGIGDVWVAV 325
S E+I A ++Q ALL V F S+ Y+ GD+ VA
Sbjct: 174 SADEMIPAALNYLGLDPNSHATGDIKQAEALLLKVRPYVAYFHSSKYIGDLANGDICVAA 233
Query: 326 GWSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIP--AASRLETKQIGGQVRGP 377
G+S D+L A R +A +PK G +LW D+ AIP A + E + V P
Sbjct: 234 GFSGDILQAAARADEAGKGVKIAYSIPKEGGNLWFDMMAIPSDATNVKEAHALINYVLQP 293
Query: 378 SPL--IHQWIEFCLQTARALPFKQEVI 402
+ + ++ + +RA F E +
Sbjct: 294 EVIAKVSDYVGYANPNSRAGEFMDEAV 320
>gi|423414921|ref|ZP_17392041.1| hypothetical protein IE1_04225 [Bacillus cereus BAG3O-2]
gi|423429297|ref|ZP_17406301.1| hypothetical protein IE7_01113 [Bacillus cereus BAG4O-1]
gi|401097841|gb|EJQ05863.1| hypothetical protein IE1_04225 [Bacillus cereus BAG3O-2]
gi|401121603|gb|EJQ29392.1| hypothetical protein IE7_01113 [Bacillus cereus BAG4O-1]
Length = 349
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 64/152 (42%), Gaps = 19/152 (12%)
Query: 227 IDPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVIV 286
DP K ++ Y WG I Y K + AP W D W + G ++++N REV+
Sbjct: 120 FDPENK-YSLVYTWGVTGIAYNKKYVKE---APTS-WADLWNEKYKGHVTLLNDSREVLG 174
Query: 287 AGGKI--------------AVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVL 332
G K +L L + FD+ + + F D W+ WS D
Sbjct: 175 VGLKKHGFSNSTKDDAQLKTAADDLKKLLPNLLAFDTDNIKQKFITEDAWIGTVWSGDAA 234
Query: 333 PAVKRMSNVAVVVPKSGASLWADLWAIPAASR 364
K +V VVPK G ++WAD AIP ++
Sbjct: 235 FIAKDNKDVEYVVPKEGGTIWADTLAIPKGAK 266
>gi|228990391|ref|ZP_04150356.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
pseudomycoides DSM 12442]
gi|228996492|ref|ZP_04156131.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus mycoides
Rock3-17]
gi|229004143|ref|ZP_04161944.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus mycoides
Rock1-4]
gi|228757004|gb|EEM06248.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus mycoides
Rock1-4]
gi|228763124|gb|EEM12032.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus mycoides
Rock3-17]
gi|228768917|gb|EEM17515.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
pseudomycoides DSM 12442]
Length = 349
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 68/152 (44%), Gaps = 19/152 (12%)
Query: 227 IDPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVIV 286
DP K ++ Y WG I Y K + AP W D W + G ++++N REV+
Sbjct: 120 FDPENK-YSLVYTWGVTGIAYNKKYVKE---APTS-WSDLWNEKYKGHVTLLNDSREVLG 174
Query: 287 AG----GKIAVQQNLALL----ANQVRL------FDSTHYLKAFGIGDVWVAVGWSSDVL 332
G G QN A L A+ +L FD+ + + F D W+ WS D
Sbjct: 175 VGLKKNGFSNSTQNDAELKTAAADLQKLLPNLLAFDTDNIKQKFITEDAWIGTVWSGDAA 234
Query: 333 PAVKRMSNVAVVVPKSGASLWADLWAIPAASR 364
K +V VVPK G ++WAD AIP ++
Sbjct: 235 FIAKDNKDVEYVVPKEGGTIWADTLAIPKGAK 266
>gi|30019440|ref|NP_831071.1| spermidine/putrescine-binding protein [Bacillus cereus ATCC 14579]
gi|206968033|ref|ZP_03228989.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus cereus
AH1134]
gi|218231222|ref|YP_002366071.1| spermidine/putrescine ABC transporter substrate-binding protein
[Bacillus cereus B4264]
gi|228951768|ref|ZP_04113867.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis serovar kurstaki str. T03a001]
gi|229043127|ref|ZP_04190854.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
AH676]
gi|229068938|ref|ZP_04202232.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
F65185]
gi|229078572|ref|ZP_04211130.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
Rock4-2]
gi|229108843|ref|ZP_04238448.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
Rock1-15]
gi|229126703|ref|ZP_04255715.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
BDRD-Cer4]
gi|229149588|ref|ZP_04277820.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
m1550]
gi|229177795|ref|ZP_04305168.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
172560W]
gi|229189469|ref|ZP_04316486.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
ATCC 10876]
gi|365162078|ref|ZP_09358213.1| hypothetical protein HMPREF1014_03676 [Bacillus sp. 7_6_55CFAA_CT2]
gi|423423468|ref|ZP_17400499.1| hypothetical protein IE5_01157 [Bacillus cereus BAG3X2-2]
gi|423434878|ref|ZP_17411859.1| hypothetical protein IE9_01059 [Bacillus cereus BAG4X12-1]
gi|423505017|ref|ZP_17481608.1| hypothetical protein IG1_02582 [Bacillus cereus HD73]
gi|423647316|ref|ZP_17622886.1| hypothetical protein IKA_01103 [Bacillus cereus VD169]
gi|449088176|ref|YP_007420617.1| spermidine/putrescine-binding protein [Bacillus thuringiensis
serovar kurstaki str. HD73]
gi|29894984|gb|AAP08272.1| Spermidine/putrescine-binding protein [Bacillus cereus ATCC 14579]
gi|206736953|gb|EDZ54100.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus cereus
AH1134]
gi|218159179|gb|ACK59171.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus cereus
B4264]
gi|228594060|gb|EEK51862.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
ATCC 10876]
gi|228605586|gb|EEK63034.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
172560W]
gi|228633934|gb|EEK90531.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
m1550]
gi|228656643|gb|EEL12469.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
BDRD-Cer4]
gi|228674612|gb|EEL29851.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
Rock1-15]
gi|228704716|gb|EEL57144.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
Rock4-2]
gi|228714222|gb|EEL66103.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
F65185]
gi|228726219|gb|EEL77449.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
AH676]
gi|228807890|gb|EEM54410.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis serovar kurstaki str. T03a001]
gi|363619395|gb|EHL70714.1| hypothetical protein HMPREF1014_03676 [Bacillus sp. 7_6_55CFAA_CT2]
gi|401115158|gb|EJQ23011.1| hypothetical protein IE5_01157 [Bacillus cereus BAG3X2-2]
gi|401125116|gb|EJQ32876.1| hypothetical protein IE9_01059 [Bacillus cereus BAG4X12-1]
gi|401286134|gb|EJR91967.1| hypothetical protein IKA_01103 [Bacillus cereus VD169]
gi|402454883|gb|EJV86671.1| hypothetical protein IG1_02582 [Bacillus cereus HD73]
gi|449021933|gb|AGE77096.1| spermidine/putrescine-binding protein [Bacillus thuringiensis
serovar kurstaki str. HD73]
Length = 349
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 64/152 (42%), Gaps = 19/152 (12%)
Query: 227 IDPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVIV 286
DP K ++ Y WG I Y K + AP W D W + G ++++N REV+
Sbjct: 120 FDPENK-YSLVYTWGVTGIAYNKKYVKE---APTS-WADLWNEKYKGHVTLLNDSREVLG 174
Query: 287 AGGKI--------------AVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVL 332
G K +L L + FD+ + + F D W+ WS D
Sbjct: 175 VGLKKHGFSNSTKDDAQLKTAADDLKKLLPNLLAFDTDNIKQKFITEDAWIGTVWSGDAA 234
Query: 333 PAVKRMSNVAVVVPKSGASLWADLWAIPAASR 364
K +V VVPK G ++WAD AIP ++
Sbjct: 235 FIAKDNKDVEYVVPKEGGTIWADTLAIPKGAK 266
>gi|431929348|ref|YP_007242382.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas
stutzeri RCH2]
gi|431827635|gb|AGA88752.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas
stutzeri RCH2]
Length = 361
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 75/166 (45%), Gaps = 28/166 (16%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQNH-NLAPIEDWKDPWWPELAGR-----ISMVNSP 281
DP G AAPY WGT IGY K + + I+ W + PE A + I+ ++S
Sbjct: 117 DP-GNAHAAPYLWGTNGIGYNVEKVKAALGVDEIDSWSVIFEPENAAKLASCGIAFLDSA 175
Query: 282 REVI--------------VAGGKIAVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGW 327
E+I A ++ L + VR F S+ Y+ G++ VA G+
Sbjct: 176 DEMIPAMLNYLGLDPNSENAADYQKAEEKLLAVRPHVRYFHSSKYISDLANGNICVAAGF 235
Query: 328 SSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIPA-ASRLE 366
S DV A R +A +P GA+LW D+ AIPA AS +E
Sbjct: 236 SGDVFQAAARAEEAGKGIEIAYAIPAEGANLWFDMLAIPADASNVE 281
>gi|330827832|ref|YP_004390784.1| spermidine/putrescine ABC transporter substrate-binding protein
[Aeromonas veronii B565]
gi|423211496|ref|ZP_17198029.1| hypothetical protein HMPREF1169_03547 [Aeromonas veronii AER397]
gi|328802968|gb|AEB48167.1| Spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Aeromonas veronii
B565]
gi|404613576|gb|EKB10597.1| hypothetical protein HMPREF1169_03547 [Aeromonas veronii AER397]
Length = 361
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 90/207 (43%), Gaps = 31/207 (14%)
Query: 226 EIDPRGKIWAAPYRWGTMAIGYKKSKFQN-HNLAPIEDWKDPWWPELAGRIS-----MVN 279
++DP G +A PY WGT IGY K + + I+ W + PE ++S ++
Sbjct: 115 KVDP-GHQYAVPYLWGTNGIGYNVDKIKAVLGVDKIDSWATIFEPENMAKLSRCGVAFLD 173
Query: 280 SPREVIVAG-----------GKIAVQQNLALLAN---QVRLFDSTHYLKAFGIGDVWVAV 325
S E+I A ++Q ALL V F S+ Y+ GD+ VA
Sbjct: 174 SADEMIPAALNYLGLDPNSHATGDIKQAEALLLKVRPYVAYFHSSKYIGDLANGDICVAA 233
Query: 326 GWSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIP--AASRLETKQIGGQVRGP 377
G+S D+L A R +A +PK G +LW D+ AIP A + E + V P
Sbjct: 234 GFSGDILQAAARADEAGKGVKIAYSIPKEGGNLWFDMMAIPSDATNVKEAHALINYVLQP 293
Query: 378 SPL--IHQWIEFCLQTARALPFKQEVI 402
+ + ++ + +RA F E +
Sbjct: 294 EVIAKVSDYVGYANPNSRAGEFMDEAV 320
>gi|228938503|ref|ZP_04101112.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis serovar berliner ATCC 10792]
gi|228971382|ref|ZP_04132008.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis serovar thuringiensis str. T01001]
gi|228977994|ref|ZP_04138374.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis Bt407]
gi|384185302|ref|YP_005571198.1| spermidine/putrescine-binding protein [Bacillus thuringiensis
serovar chinensis CT-43]
gi|410673593|ref|YP_006925964.1| spermidine/putrescine-binding periplasmic protein 2 [Bacillus
thuringiensis Bt407]
gi|423382787|ref|ZP_17360043.1| hypothetical protein ICE_00533 [Bacillus cereus BAG1X1-2]
gi|423530753|ref|ZP_17507198.1| hypothetical protein IGE_04305 [Bacillus cereus HuB1-1]
gi|452197614|ref|YP_007477695.1| ABC transporter, periplasmic spermidine putrescine-binding protein
PotD [Bacillus thuringiensis serovar thuringiensis str.
IS5056]
gi|228781782|gb|EEM29980.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis Bt407]
gi|228788249|gb|EEM36202.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis serovar thuringiensis str. T01001]
gi|228821240|gb|EEM67256.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis serovar berliner ATCC 10792]
gi|326939011|gb|AEA14907.1| spermidine/putrescine-binding protein [Bacillus thuringiensis
serovar chinensis CT-43]
gi|401643647|gb|EJS61341.1| hypothetical protein ICE_00533 [Bacillus cereus BAG1X1-2]
gi|402446087|gb|EJV77951.1| hypothetical protein IGE_04305 [Bacillus cereus HuB1-1]
gi|409172722|gb|AFV17027.1| spermidine/putrescine-binding periplasmic protein 2 [Bacillus
thuringiensis Bt407]
gi|452103007|gb|AGF99946.1| ABC transporter, periplasmic spermidine putrescine-binding protein
PotD [Bacillus thuringiensis serovar thuringiensis str.
IS5056]
Length = 349
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 64/152 (42%), Gaps = 19/152 (12%)
Query: 227 IDPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVIV 286
DP K ++ Y WG I Y K + AP W D W + G ++++N REV+
Sbjct: 120 FDPENK-YSLVYTWGVTGIAYNKKYVKE---APTS-WADLWNEKYKGHVTLLNDSREVLG 174
Query: 287 AGGKI--------------AVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVL 332
G K +L L + FD+ + + F D W+ WS D
Sbjct: 175 VGLKKHGFSNSTKEDAELKTAADDLKKLLPNLLAFDTDNIKQKFITEDAWIGTVWSGDAA 234
Query: 333 PAVKRMSNVAVVVPKSGASLWADLWAIPAASR 364
K +V VVPK G ++WAD AIP ++
Sbjct: 235 FIAKDNKDVEYVVPKEGGTIWADTLAIPKGAK 266
>gi|148652871|ref|YP_001279964.1| extracellular solute-binding protein [Psychrobacter sp. PRwf-1]
gi|148571955|gb|ABQ94014.1| extracellular solute-binding protein, family 1 [Psychrobacter sp.
PRwf-1]
Length = 374
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 70/153 (45%), Gaps = 19/153 (12%)
Query: 227 IDPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVIV 286
DP+ K ++ PY WG+ I KS+ ++ I W D W PE GR+ ++N R+V
Sbjct: 143 FDPQNK-FSVPYLWGSSGIAVNKSRI---DINSITSWNDLWRPEFEGRVMLMNDLRDVFT 198
Query: 287 AGGKI--------------AVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVL 332
G A Q L+ L VR F+S F G+ ++ + W+ +V+
Sbjct: 199 MGLLTLGYPATTHDPKHIEAAYQKLSKLMPNVRTFNSDAPRMPFMEGETYLGLAWNGEVI 258
Query: 333 PAVKR-MSNVAVVVPKSGASLWADLWAIPAASR 364
A + M + V PK G +W D +IP ++
Sbjct: 259 MAQDQGMPELDFVYPKEGVIMWMDNMSIPKNAK 291
>gi|406674913|ref|ZP_11082105.1| hypothetical protein HMPREF1170_00313 [Aeromonas veronii AMC35]
gi|404628421|gb|EKB25203.1| hypothetical protein HMPREF1170_00313 [Aeromonas veronii AMC35]
Length = 361
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 90/207 (43%), Gaps = 31/207 (14%)
Query: 226 EIDPRGKIWAAPYRWGTMAIGYKKSKFQN-HNLAPIEDWKDPWWPELAGRIS-----MVN 279
++DP G +A PY WGT IGY K + + I+ W + PE ++S ++
Sbjct: 115 KVDP-GHQYAVPYLWGTNGIGYNVDKIKAVLGVDKIDSWATIFEPENMAKLSRCGVAFLD 173
Query: 280 SPREVIVAG-----------GKIAVQQNLALLAN---QVRLFDSTHYLKAFGIGDVWVAV 325
S E+I A ++Q ALL V F S+ Y+ GD+ VA
Sbjct: 174 SADEMIPAALNYLGLDPNSHATGDIKQAEALLLKVRPYVAYFHSSKYIGDLANGDICVAA 233
Query: 326 GWSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIP--AASRLETKQIGGQVRGP 377
G+S D+L A R +A +PK G +LW D+ AIP A + E + V P
Sbjct: 234 GFSGDILQAAARADEAGKGVKIAYSIPKEGGNLWFDMMAIPSDATNVKEAHALINYVLQP 293
Query: 378 SPL--IHQWIEFCLQTARALPFKQEVI 402
+ + ++ + +RA F E +
Sbjct: 294 EVIAKVSDYVGYANPNSRAGEFMDEAV 320
>gi|229172027|ref|ZP_04299592.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
MM3]
gi|423404099|ref|ZP_17381272.1| hypothetical protein ICW_04497 [Bacillus cereus BAG2X1-2]
gi|423475271|ref|ZP_17451986.1| hypothetical protein IEO_00729 [Bacillus cereus BAG6X1-1]
gi|228611370|gb|EEK68627.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
MM3]
gi|401647306|gb|EJS64915.1| hypothetical protein ICW_04497 [Bacillus cereus BAG2X1-2]
gi|402436373|gb|EJV68404.1| hypothetical protein IEO_00729 [Bacillus cereus BAG6X1-1]
Length = 349
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 64/152 (42%), Gaps = 19/152 (12%)
Query: 227 IDPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVIV 286
DP K ++ Y WG I Y K + AP W D W + G ++++N REV+
Sbjct: 120 FDPENK-YSLVYTWGVTGIAYNKKYVKE---APTS-WADLWNEKYKGHVTLLNDSREVLG 174
Query: 287 AGGKI--------------AVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVL 332
G K +L L + FD+ + + F D W+ WS D
Sbjct: 175 MGLKKHGFSNSTKDDTQLKTAADDLKKLLPNLLAFDTDNIKQKFITEDAWIGTVWSGDAA 234
Query: 333 PAVKRMSNVAVVVPKSGASLWADLWAIPAASR 364
K +V VVPK G ++WAD AIP ++
Sbjct: 235 FIAKDNKDVEYVVPKEGGTIWADTLAIPKGAK 266
>gi|229016632|ref|ZP_04173570.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
AH1273]
gi|229022847|ref|ZP_04179368.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
AH1272]
gi|228738458|gb|EEL88933.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
AH1272]
gi|228744663|gb|EEL94727.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
AH1273]
Length = 349
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 64/152 (42%), Gaps = 19/152 (12%)
Query: 227 IDPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVIV 286
DP K ++ Y WG I Y K + AP W D W + G ++++N REV+
Sbjct: 120 FDPENK-YSLVYTWGVTGIAYNKKYVKE---APTS-WNDLWNEKYKGHVTLLNDSREVLG 174
Query: 287 AGGKI--------------AVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVL 332
G K +L L + FD+ + + F D W+ WS D
Sbjct: 175 MGLKKNGFSNSTKEDAQLKTASADLQKLLPNLLAFDTDNIKQKFITEDAWIGTVWSGDAA 234
Query: 333 PAVKRMSNVAVVVPKSGASLWADLWAIPAASR 364
K +V VVPK G ++WAD AIP ++
Sbjct: 235 FIAKDNKDVEYVVPKEGGTIWADTLAIPKGAK 266
>gi|418056504|ref|ZP_12694557.1| extracellular solute-binding protein family 1 [Hyphomicrobium
denitrificans 1NES1]
gi|353209723|gb|EHB75126.1| extracellular solute-binding protein family 1 [Hyphomicrobium
denitrificans 1NES1]
Length = 370
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 79/163 (48%), Gaps = 27/163 (16%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQNHNL-APIEDWKDPWWPELAGR-----ISMVNSP 281
DP + +A Y WGT IGY +K + AP++ W + PE+ + + M+++P
Sbjct: 126 DPDNQ-YAINYMWGTTGIGYNVAKVKERMADAPVDSWDLVFKPEILAKFKDCGVMMLDAP 184
Query: 282 REVIVAGGKI-----------AVQQNLALLAN---QVRLFDSTHYLKAFGIGDVWVAVGW 327
+++ A +++ ALL ++ F S+ Y+ A GD+ +AVG+
Sbjct: 185 DDILPAALNYLGLDPNSNKPEDIEKAGALLEKVRPYIQKFHSSEYINALANGDICIAVGY 244
Query: 328 SSDVLPA------VKRMSNVAVVVPKSGASLWADLWAIPAASR 364
S D+L A K +A +PK GA +W D AIPA ++
Sbjct: 245 SGDILQARSRAEEAKNGQEIAYSLPKQGAQMWFDEMAIPADAK 287
>gi|333367327|ref|ZP_08459603.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Psychrobacter sp.
1501(2011)]
gi|332978832|gb|EGK15515.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Psychrobacter sp.
1501(2011)]
Length = 386
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 87/200 (43%), Gaps = 34/200 (17%)
Query: 225 GEIDPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREV 284
E DP K ++ PY WG+ I + +L+ I W D W P+ GR+ ++N R+V
Sbjct: 153 AEFDPENK-YSVPYLWGSSGIAVNTKRI---DLSSINSWDDLWLPQYKGRVMLMNDLRDV 208
Query: 285 -----IVAGGKIAVQ---------QNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSD 330
+ G + Q + LA L VR F+S F G+ ++ + W+ +
Sbjct: 209 FSMSLLTLGYPTSTQDPNHIKAAYEKLATLMPNVRTFNSDAPRMPFMEGETYLGLAWNGE 268
Query: 331 VLPAVKR-MSNVAVVVPKSGASLWADLWAIPA-ASRLETKQIGGQVRGPSPLIHQWIEFC 388
V+ A + M + V PK G +W D AIP A LE + +I+F
Sbjct: 269 VIMAQDQGMPELDFVYPKEGVIMWMDNMAIPKNAKNLENA-------------YTFIDFL 315
Query: 389 LQTARALPFKQEVIPGASPS 408
++ + +E+ G SPS
Sbjct: 316 MRPENSAIISEEIGYG-SPS 334
>gi|398857198|ref|ZP_10612900.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM79]
gi|398241245|gb|EJN26901.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM79]
Length = 365
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 87/327 (26%), Positives = 139/327 (42%), Gaps = 54/327 (16%)
Query: 138 LRVVSLQNSVPQSWVKDFMRSQGKRLKF---------QMNLCASIDGIVNNLSTPFNK-L 187
LRV + + + VK F G R+ + + L A G ++ P N L
Sbjct: 28 LRVYNWSDYIAPDTVKKFEDETGIRVTYDVFDSNETLEARLLAGKSGY--DIVVPSNSFL 85
Query: 188 SFAIKKRFIEPIAEAEDQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIGY 247
+ IK +P+ +++ +W K L+ V L++ A + D A PY WG++ IGY
Sbjct: 86 AKQIKAGVYQPLDKSKLPNW-KNLN---PVLLKNASASDPD---NGHAFPYMWGSIGIGY 138
Query: 248 KKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNSPREVIVAG-----------G 289
+K + AP+ W + PE A + IS ++SP E++ A
Sbjct: 139 NPAKVKEVLGTDAPVNSWDLLFKPENAAKLKACGISFLDSPTEMLPAALHYLSYPVNSQD 198
Query: 290 KIAVQQNLALLAN---QVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSN------ 340
K+ + + AL V F S+ Y+ G++ VAVG+S DVL A R
Sbjct: 199 KVQIAEAEALFMKIRPSVAYFHSSKYISDLANGNICVAVGYSGDVLQAKARAKEAGDKVK 258
Query: 341 VAVVVPKSGASLWADLWAIP--AASRLETKQIGGQVRGPSPL--IHQWIEFCLQTARALP 396
+ +PK GA + D+ AIP AA+ + P + + I + A A P
Sbjct: 259 IEYSIPKEGAGSFYDMVAIPRDAANVDNAYLFMNFLMRPDIIAEVTNNIGYSNANAAATP 318
Query: 397 FKQEVI---PGAS-PSALESTLVKLPE 419
E I PG+ P A+ +TL +P+
Sbjct: 319 LVDEAIRDDPGSYPPQAVMATLYAIPD 345
>gi|146280465|ref|YP_001170618.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas stutzeri A1501]
gi|386018710|ref|YP_005936734.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas stutzeri DSM 4166]
gi|145568670|gb|ABP77776.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas stutzeri A1501]
gi|327478682|gb|AEA81992.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas stutzeri DSM 4166]
Length = 361
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 75/166 (45%), Gaps = 28/166 (16%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQNH-NLAPIEDWKDPWWPELAGR-----ISMVNSP 281
DP G AAPY WGT IGY K + + I+ W + PE A + I+ ++S
Sbjct: 117 DP-GNAHAAPYLWGTNGIGYNVEKVKAALGVDKIDSWSVLFEPENAQKLASCGIAFLDSA 175
Query: 282 REVI--------------VAGGKIAVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGW 327
E+I A ++ L + VR F S+ Y+ G++ VA G+
Sbjct: 176 DEMIPAMLNYLGLDPNSENAADYQKAEEKLLAVRPHVRYFHSSKYISDLANGNICVAAGF 235
Query: 328 SSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIPA-ASRLE 366
S DV A R +A +PK G +LW D+ AIPA AS +E
Sbjct: 236 SGDVFQAAARAEEAGKGIEIAYAIPKEGGNLWFDMLAIPADASNVE 281
>gi|390450397|ref|ZP_10235990.1| extracellular solute-binding protein family 1 [Nitratireductor
aquibiodomus RA22]
gi|389662745|gb|EIM74302.1| extracellular solute-binding protein family 1 [Nitratireductor
aquibiodomus RA22]
Length = 365
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 83/187 (44%), Gaps = 29/187 (15%)
Query: 204 DQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIGYKKSKFQN-HNLAPIED 262
D+D +S+ W + S+ DP G + Y WGT +GY K + A ++
Sbjct: 99 DKDKLPNISNMWD--MISDRVAVYDP-GNEHSINYMWGTTGVGYNVGKAEEILGTAKVDT 155
Query: 263 WKDPWWPELAGR-----ISMVNSPREVIVAG-------------GKIAVQQNLALLAN-Q 303
W + PELA + I M++S EV+ + +A + L L
Sbjct: 156 WDVMFTPELAAKFKDCGIYMLDSASEVVRSALIYLGLDPNTPSSDDLAKAEELLLSVRPY 215
Query: 304 VRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLW 357
VR F S+ Y+ GD+ +A+G+S D+ A R + V +PK GA LW D
Sbjct: 216 VRKFHSSEYINGLANGDICLALGYSGDIFQARDRAAEADQGVTVGYAIPKEGAMLWFDQM 275
Query: 358 AIPAASR 364
AIPA ++
Sbjct: 276 AIPADAK 282
>gi|399911594|ref|ZP_10779908.1| extracellular solute-binding protein [Halomonas sp. KM-1]
Length = 367
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 84/202 (41%), Gaps = 43/202 (21%)
Query: 231 GKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-------ISMVNSP 281
G ++ PY WGT IGY + + AP++ W + PE+ ISM++S
Sbjct: 122 GSRYSIPYMWGTNGIGYNVERVTEILGDDAPLDSWALLFDPEITTALRQGGCGISMLDSG 181
Query: 282 REVIVAGGKI--------------AVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGW 327
E++ A +A + + + F S+ Y+ GD+ VA G+
Sbjct: 182 DEMLSPAMAYLGLSPLSEETADLEAAGDLIAAVRDNITYFHSSRYISDLANGDICVAAGY 241
Query: 328 SSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASRLETKQIGGQVRGPSPL- 380
S D+ A R + ++PK GA+LW D+ AIPA + P+P
Sbjct: 242 SGDIFQAADRAEEAGRDFTIDYIIPKEGAALWFDMMAIPADA-------------PNPDN 288
Query: 381 IHQWIEFCLQTARALPFKQEVI 402
H +I F L+ A + V+
Sbjct: 289 AHAFINFILEPEVAAAITEYVV 310
>gi|227825012|ref|ZP_03989844.1| conserved hypothetical protein [Acidaminococcus sp. D21]
gi|352683976|ref|YP_004895960.1| hypothetical protein Acin_0580 [Acidaminococcus intestini RyC-MR95]
gi|226905511|gb|EEH91429.1| conserved hypothetical protein [Acidaminococcus sp. D21]
gi|350278630|gb|AEQ21820.1| conserved hypothetical protein [Acidaminococcus intestini RyC-MR95]
Length = 353
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 69/152 (45%), Gaps = 19/152 (12%)
Query: 227 IDPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVIV 286
DP G+ ++ Y WG I Y K + AP W+D W P GR+ ++N REVI
Sbjct: 125 FDPNGE-YSVVYTWGMTGIIYNKKYVKT---APTS-WQDLWNPVYKGRVILLNDSREVIG 179
Query: 287 AG-------------GKIAVQ-QNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVL 332
G+I + ++L LA V +D+ + F + W+ + WS D
Sbjct: 180 MALKKHGFSNNATDPGQIDIAFKDLKTLAPNVLAYDTDSIKQKFIAEEAWIGMMWSGDAH 239
Query: 333 PAVKRMSNVAVVVPKSGASLWADLWAIPAASR 364
+V V+PK G ++WAD AIP ++
Sbjct: 240 FVHNDNPDVGFVIPKEGTTVWADTLAIPKGAK 271
>gi|338997731|ref|ZP_08636423.1| extracellular solute-binding protein [Halomonas sp. TD01]
gi|338765360|gb|EGP20300.1| extracellular solute-binding protein [Halomonas sp. TD01]
Length = 367
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 100/234 (42%), Gaps = 57/234 (24%)
Query: 230 RGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGRIS-------MVNS 280
+G ++ PY WGT +GY + + AP++ W + PE+ ++S M++S
Sbjct: 121 KGSEYSVPYMWGTNGLGYNVDRVTEILGDDAPVDSWALLFDPEITKQLSDAGCGLAMLDS 180
Query: 281 PREVIV-------------------AGGKIAVQQNLALLANQVRLFDSTHYLKAFGIGDV 321
E++ AGG++ +A + + + F S+ Y+ GD+
Sbjct: 181 GDEMLSPAMAYLGLSPLSENIEDLEAGGEL-----IANIRDNITYFHSSRYVSDLANGDI 235
Query: 322 WVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPA-ASRLETKQIGGQV 374
VA G+S D+ A R + +PK GA+LW D+ A+PA A E
Sbjct: 236 CVAAGYSGDIFQAADRAEEAGRDFTIGYSIPKEGAALWFDMMAVPADAPNTENA------ 289
Query: 375 RGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALESTLVKLPEELLKGKPSV 428
H +I F L+ A E + A+P+A + L +ELL P+V
Sbjct: 290 -------HAFINFILEPEIAAEIS-EYVRYANPNAAANEY--LSDELLN-DPAV 332
>gi|228984460|ref|ZP_04144638.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis serovar tochigiensis BGSC 4Y1]
gi|228775326|gb|EEM23714.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis serovar tochigiensis BGSC 4Y1]
Length = 349
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 64/152 (42%), Gaps = 19/152 (12%)
Query: 227 IDPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVIV 286
DP K ++ Y WG I Y K + AP W D W + G ++++N REV+
Sbjct: 120 FDPENK-YSLVYTWGVTGIAYNKKYVKE---APTS-WADLWNEKYKGHVTLLNDSREVVG 174
Query: 287 AGGKI--------------AVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVL 332
G K +L L + FD+ + + F D W+ WS D
Sbjct: 175 MGLKKHGFSNSTKDDAQLKTAATDLQKLLPNLLAFDTDNIKQKFITEDAWIGTVWSGDAA 234
Query: 333 PAVKRMSNVAVVVPKSGASLWADLWAIPAASR 364
K +V VVPK G ++WAD AIP ++
Sbjct: 235 FIAKDNKDVEYVVPKEGGTIWADTLAIPKGAK 266
>gi|398984257|ref|ZP_10690526.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM24]
gi|399011979|ref|ZP_10714307.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM16]
gi|398116585|gb|EJM06344.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM16]
gi|398155956|gb|EJM44383.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM24]
Length = 362
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 75/180 (41%), Gaps = 32/180 (17%)
Query: 208 FKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIGYKKSKF-QNHNLAPIEDWKDP 266
FK L K L+ ND G + PY WGT IGY K Q + I+ W
Sbjct: 103 FKNLDPKLLELLQKNDPGNEH------SVPYLWGTNGIGYNVDKVKQVLGIDHIDSWAVL 156
Query: 267 WWPELAGR-----ISMVNSPREVIVA--------------GGKIAVQQNLALLANQVRLF 307
+ PE + +SM++S EV A + L + + F
Sbjct: 157 FEPENLKKLTQCGVSMMDSADEVFPAVLNYMGMDPRSENPEDYKKAEAKLLSIRPYITYF 216
Query: 308 DSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPA 361
S+ Y+ GD+ VA G+S DV A R N+A +PK GA+LW DL AIPA
Sbjct: 217 HSSKYVSDLANGDICVAFGYSGDVFQAANRAKEAKNGVNIAYAIPKEGANLWFDLLAIPA 276
>gi|167634382|ref|ZP_02392703.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. A0442]
gi|170686738|ref|ZP_02877958.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. A0465]
gi|254682552|ref|ZP_05146413.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. CNEVA-9066]
gi|254726214|ref|ZP_05187996.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. A1055]
gi|254740343|ref|ZP_05198034.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. Kruger B]
gi|421637888|ref|ZP_16078485.1| spermidine/putrescine ABC transporter substrate-binding protein
[Bacillus anthracis str. BF1]
gi|167530270|gb|EDR92996.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. A0442]
gi|170669261|gb|EDT20004.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. A0465]
gi|403395447|gb|EJY92686.1| spermidine/putrescine ABC transporter substrate-binding protein
[Bacillus anthracis str. BF1]
Length = 345
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 64/152 (42%), Gaps = 19/152 (12%)
Query: 227 IDPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVIV 286
DP K ++ Y WG I Y K + AP W D W + G ++++N REV+
Sbjct: 116 FDPENK-YSLVYTWGVTGIAYNKKYVKE---APTS-WTDLWNEKYKGHVTLLNDSREVLG 170
Query: 287 AGGKI--------------AVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVL 332
G K +L L + FD+ + + F D W+ WS D
Sbjct: 171 MGLKKNGFSNSTKDDAQLKTAATDLQKLLPNLLAFDTDNIKQKFITEDAWIGTVWSGDAA 230
Query: 333 PAVKRMSNVAVVVPKSGASLWADLWAIPAASR 364
K +V VVPK G ++WAD AIP ++
Sbjct: 231 FIAKDNKDVEYVVPKEGGTIWADTLAIPKGAK 262
>gi|30261391|ref|NP_843768.1| spermidine/putrescine ABC transporter substrate-binding protein
[Bacillus anthracis str. Ames]
gi|47526566|ref|YP_017915.1| spermidine/putrescine ABC transporter substrate-binding protein
[Bacillus anthracis str. 'Ames Ancestor']
gi|49184220|ref|YP_027472.1| spermidine/putrescine ABC transporter substrate-binding protein
[Bacillus anthracis str. Sterne]
gi|65318655|ref|ZP_00391614.1| COG0687: Spermidine/putrescine-binding periplasmic protein
[Bacillus anthracis str. A2012]
gi|165870372|ref|ZP_02215027.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. A0488]
gi|167639331|ref|ZP_02397603.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. A0193]
gi|170706266|ref|ZP_02896727.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. A0389]
gi|177651500|ref|ZP_02934289.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. A0174]
gi|190568736|ref|ZP_03021640.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. Tsiankovskii-I]
gi|227815871|ref|YP_002815880.1| spermidine/putrescine ABC transporter spermidine/putrescine-binding
protein [Bacillus anthracis str. CDC 684]
gi|229602179|ref|YP_002865806.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. A0248]
gi|254733970|ref|ZP_05191684.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. Western North America USA6153]
gi|254753730|ref|ZP_05205765.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. Vollum]
gi|254758826|ref|ZP_05210853.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. Australia 94]
gi|386735088|ref|YP_006208269.1| Extracellular solute-binding protein family 1 precursor [Bacillus
anthracis str. H9401]
gi|421507071|ref|ZP_15953992.1| spermidine/putrescine ABC transporter substrate-binding protein
[Bacillus anthracis str. UR-1]
gi|30255245|gb|AAP25254.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. Ames]
gi|47501714|gb|AAT30390.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. 'Ames Ancestor']
gi|49178147|gb|AAT53523.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. Sterne]
gi|164713867|gb|EDR19389.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. A0488]
gi|167512770|gb|EDR88144.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. A0193]
gi|170128800|gb|EDS97666.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. A0389]
gi|172082778|gb|EDT67841.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. A0174]
gi|190560152|gb|EDV14133.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. Tsiankovskii-I]
gi|227005570|gb|ACP15313.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. CDC 684]
gi|229266587|gb|ACQ48224.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. A0248]
gi|384384940|gb|AFH82601.1| Extracellular solute-binding protein family 1 precursor [Bacillus
anthracis str. H9401]
gi|401822723|gb|EJT21872.1| spermidine/putrescine ABC transporter substrate-binding protein
[Bacillus anthracis str. UR-1]
Length = 345
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 64/152 (42%), Gaps = 19/152 (12%)
Query: 227 IDPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVIV 286
DP K ++ Y WG I Y K + AP W D W + G ++++N REV+
Sbjct: 116 FDPENK-YSLVYTWGVTGIAYNKKYVKE---APTS-WTDLWNEKYKGHVTLLNDSREVLG 170
Query: 287 AGGKI--------------AVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVL 332
G K +L L + FD+ + + F D W+ WS D
Sbjct: 171 MGLKKNGFSNSTKDDAQLKTAATDLQKLLPNLLAFDTDNIKQKFITEDAWIGTVWSGDAA 230
Query: 333 PAVKRMSNVAVVVPKSGASLWADLWAIPAASR 364
K +V VVPK G ++WAD AIP ++
Sbjct: 231 FIAKDNKDVEYVVPKEGGTIWADTLAIPKGAK 262
>gi|407776772|ref|ZP_11124044.1| extracellular solute-binding protein [Nitratireductor pacificus
pht-3B]
gi|407301468|gb|EKF20588.1| extracellular solute-binding protein [Nitratireductor pacificus
pht-3B]
Length = 365
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 112/259 (43%), Gaps = 42/259 (16%)
Query: 139 RVVSLQN---SVPQSWVKDFMRSQGKRLKFQMNLCASI-------DGIVNNLSTPFNKLS 188
RVV++ N + +S ++DF + G ++ + + I G ++ P +
Sbjct: 27 RVVNVYNWSDYIDESILEDFTKETGIKVVYDVYDSNEILETKLLAGGSGYDVVVPSGEF- 85
Query: 189 FAIKKRFIEPIAEAEDQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIGYK 248
+ ++ + + D+ L++ W + S DP G ++ Y WGT IGY
Sbjct: 86 --LGRQISAGVFQKLDKSKLPNLANMWD--MISERTATYDP-GNEYSINYMWGTTGIGYN 140
Query: 249 KSKFQNHNLAP-IEDWKDPWWPELAGR-----ISMVNSPREVIVAG-------------G 289
+K + P I+ W + PE+A + I M++S EV+ A
Sbjct: 141 AAKAEEILGTPKIDTWDVLFQPEVAAKFKDCGIHMLDSASEVVRAALIYQGLNPNTPSAD 200
Query: 290 KIA-VQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSN------VA 342
+A ++ L + VR F S+ Y+ GD+ +A+G+S D+ A R + V
Sbjct: 201 DLARAEELLTAVRPNVRKFHSSEYINGLANGDICLALGYSGDIFQARDRAAEADQGVAVG 260
Query: 343 VVVPKSGASLWADLWAIPA 361
+PK GA LW D AIPA
Sbjct: 261 YAIPKEGALLWFDQMAIPA 279
>gi|229143992|ref|ZP_04272408.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
BDRD-ST24]
gi|296501969|ref|YP_003663669.1| spermidine/putrescine-binding protein [Bacillus thuringiensis
BMB171]
gi|423643567|ref|ZP_17619185.1| hypothetical protein IK9_03512 [Bacillus cereus VD166]
gi|423654168|ref|ZP_17629467.1| hypothetical protein IKG_01156 [Bacillus cereus VD200]
gi|228639389|gb|EEK95803.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
BDRD-ST24]
gi|296323021|gb|ADH05949.1| spermidine/putrescine-binding protein [Bacillus thuringiensis
BMB171]
gi|401274147|gb|EJR80125.1| hypothetical protein IK9_03512 [Bacillus cereus VD166]
gi|401296635|gb|EJS02252.1| hypothetical protein IKG_01156 [Bacillus cereus VD200]
Length = 349
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 64/152 (42%), Gaps = 19/152 (12%)
Query: 227 IDPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVIV 286
DP K ++ Y WG I Y K + AP W D W + G ++++N REV+
Sbjct: 120 FDPENK-YSLVYTWGVTGIAYNKKYVKE---APTS-WADLWNEKYKGHVTLLNDSREVLG 174
Query: 287 AGGKI--------------AVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVL 332
G K +L L + FD+ + + F D W+ WS D
Sbjct: 175 MGLKKHGFSNSTKDDAQLKTAADDLKKLLPNLLAFDTDNIKQKFITEDAWIGTVWSGDAA 234
Query: 333 PAVKRMSNVAVVVPKSGASLWADLWAIPAASR 364
K +V VVPK G ++WAD AIP ++
Sbjct: 235 FIAKDNKDVEYVVPKEGGTIWADTLAIPKGAK 266
>gi|228932668|ref|ZP_04095542.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis serovar andalousiensis BGSC 4AW1]
gi|228826986|gb|EEM72746.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis serovar andalousiensis BGSC 4AW1]
Length = 349
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 64/152 (42%), Gaps = 19/152 (12%)
Query: 227 IDPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVIV 286
DP K ++ Y WG I Y K + AP W D W + G ++++N REV+
Sbjct: 120 FDPENK-YSLVYTWGVTGIAYNKKYVKE---APTS-WTDLWNEKYKGHVTLLNDSREVLG 174
Query: 287 AGGKI--------------AVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVL 332
G K +L L + FD+ + + F D W+ WS D
Sbjct: 175 MGLKKNGFSNSTKDDAQLKTAATDLQKLLPNLLAFDTDNIKQKFITEDAWIGTVWSGDAA 234
Query: 333 PAVKRMSNVAVVVPKSGASLWADLWAIPAASR 364
K +V VVPK G ++WAD AIP ++
Sbjct: 235 FIAKDNKDVEYVVPKEGGTIWADTLAIPKGAK 266
>gi|75760662|ref|ZP_00740689.1| Spermidine/putrescine-binding protein [Bacillus thuringiensis
serovar israelensis ATCC 35646]
gi|218896320|ref|YP_002444731.1| spermidine/putrescine ABC transporter substrate-binding protein
[Bacillus cereus G9842]
gi|228899966|ref|ZP_04064205.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis IBL 4222]
gi|228964344|ref|ZP_04125462.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis serovar sotto str. T04001]
gi|402561620|ref|YP_006604344.1| spermidine/putrescine ABC transporter substrate-binding protein
[Bacillus thuringiensis HD-771]
gi|423361349|ref|ZP_17338851.1| hypothetical protein IC1_03328 [Bacillus cereus VD022]
gi|423564315|ref|ZP_17540591.1| hypothetical protein II5_03719 [Bacillus cereus MSX-A1]
gi|434374327|ref|YP_006608971.1| spermidine/putrescine ABC transporter substrate-binding protein
[Bacillus thuringiensis HD-789]
gi|74491843|gb|EAO55032.1| Spermidine/putrescine-binding protein [Bacillus thuringiensis
serovar israelensis ATCC 35646]
gi|218543320|gb|ACK95714.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus cereus
G9842]
gi|228795353|gb|EEM42842.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis serovar sotto str. T04001]
gi|228859677|gb|EEN04098.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis IBL 4222]
gi|401079797|gb|EJP88091.1| hypothetical protein IC1_03328 [Bacillus cereus VD022]
gi|401197346|gb|EJR04279.1| hypothetical protein II5_03719 [Bacillus cereus MSX-A1]
gi|401790272|gb|AFQ16311.1| spermidine/putrescine ABC transporter substrate-binding protein
[Bacillus thuringiensis HD-771]
gi|401872884|gb|AFQ25051.1| spermidine/putrescine ABC transporter substrate-binding protein
[Bacillus thuringiensis HD-789]
Length = 349
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 64/152 (42%), Gaps = 19/152 (12%)
Query: 227 IDPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVIV 286
DP K ++ Y WG I Y K + AP W D W + G ++++N REV+
Sbjct: 120 FDPENK-YSLVYTWGVTGIAYNKKYVKE---APTS-WADLWNEKYKGHVTLLNDSREVLG 174
Query: 287 AGGKI--------------AVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVL 332
G K +L L + FD+ + + F D W+ WS D
Sbjct: 175 MGLKKHGFSNSTKEDAELKTAADDLKKLLPNLLAFDTDNIKQKFITEDAWIGTVWSGDAA 234
Query: 333 PAVKRMSNVAVVVPKSGASLWADLWAIPAASR 364
K +V VVPK G ++WAD AIP ++
Sbjct: 235 FIAKDNKDVEYVVPKEGGTIWADTLAIPKGAK 266
>gi|228907017|ref|ZP_04070883.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis IBL 200]
gi|228852631|gb|EEM97419.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis IBL 200]
Length = 349
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 64/152 (42%), Gaps = 19/152 (12%)
Query: 227 IDPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVIV 286
DP K ++ Y WG I Y K + AP W D W + G ++++N REV+
Sbjct: 120 FDPENK-YSLVYTWGVTGIAYNKKYVKE---APTS-WADLWNEKYKGHVTLLNDSREVLG 174
Query: 287 AGGKI--------------AVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVL 332
G K +L L + FD+ + + F D W+ WS D
Sbjct: 175 MGLKKHGFSNSTKEDAELKTAADDLKKLLPNLLAFDTDNIKQKFITEDAWIGTVWSGDAA 234
Query: 333 PAVKRMSNVAVVVPKSGASLWADLWAIPAASR 364
K +V VVPK G ++WAD AIP ++
Sbjct: 235 FIAKDNKDVEYVVPKEGGTIWADTLAIPKGAK 266
>gi|228957658|ref|ZP_04119405.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis serovar pakistani str. T13001]
gi|423629753|ref|ZP_17605501.1| hypothetical protein IK5_02604 [Bacillus cereus VD154]
gi|228802000|gb|EEM48870.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis serovar pakistani str. T13001]
gi|401266887|gb|EJR72956.1| hypothetical protein IK5_02604 [Bacillus cereus VD154]
Length = 349
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 64/152 (42%), Gaps = 19/152 (12%)
Query: 227 IDPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVIV 286
DP K ++ Y WG I Y K + AP W D W + G ++++N REV+
Sbjct: 120 FDPENK-YSLVYTWGVTGIAYNKKYVKE---APTS-WADLWNEKYKGHVTLLNDSREVLG 174
Query: 287 AGGKI--------------AVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVL 332
G K +L L + FD+ + + F D W+ WS D
Sbjct: 175 MGLKKHGFSNSTKDDAQLKTAADDLKKLLPNLLAFDTDNIKQKFITEDAWIGTVWSGDAA 234
Query: 333 PAVKRMSNVAVVVPKSGASLWADLWAIPAASR 364
K +V VVPK G ++WAD AIP ++
Sbjct: 235 FIAKDNKDVEYVVPKEGGTIWADTLAIPKGAK 266
>gi|229138074|ref|ZP_04266672.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
BDRD-ST26]
gi|229195584|ref|ZP_04322350.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
m1293]
gi|228587833|gb|EEK45885.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
m1293]
gi|228645419|gb|EEL01653.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
BDRD-ST26]
Length = 306
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 64/152 (42%), Gaps = 19/152 (12%)
Query: 227 IDPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVIV 286
DP K ++ Y WG I Y K + AP W D W + G ++++N REV+
Sbjct: 77 FDPENK-YSLVYTWGVTGIAYNKKYVKE---APTS-WADLWNEKYKGHVTLLNDSREVLG 131
Query: 287 AGGKI--------------AVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVL 332
G K +L L + FD+ + + F D W+ WS D
Sbjct: 132 MGLKKHGFSNSTKDDAQLKTAATDLQKLLPNLLAFDTDNIKQKFITEDAWIGTVWSGDAA 191
Query: 333 PAVKRMSNVAVVVPKSGASLWADLWAIPAASR 364
K +V VVPK G ++WAD AIP ++
Sbjct: 192 FIAKDNKDVEYVVPKEGGTIWADTLAIPKGAK 223
>gi|423481266|ref|ZP_17457956.1| hypothetical protein IEQ_01044 [Bacillus cereus BAG6X1-2]
gi|401146026|gb|EJQ53546.1| hypothetical protein IEQ_01044 [Bacillus cereus BAG6X1-2]
Length = 349
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 63/152 (41%), Gaps = 19/152 (12%)
Query: 227 IDPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVIV 286
DP K ++ Y WG I Y K + P W D W + G ++++N REV+
Sbjct: 120 FDPENK-YSLVYTWGVTGIAYNKKYVKE---TPTS-WNDLWNEKYKGHVTLLNDSREVLG 174
Query: 287 AGGKI--------------AVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVL 332
G K +L L + FD+ + + F D W+ WS D
Sbjct: 175 MGLKKNGFSNSTKEDAQLKTASNDLQKLLPNLLAFDTDNIKQKFITEDAWIGTVWSGDAA 234
Query: 333 PAVKRMSNVAVVVPKSGASLWADLWAIPAASR 364
K +V VVPK G ++WAD AIP ++
Sbjct: 235 FIAKDNKDVGYVVPKEGGTIWADTLAIPKGAK 266
>gi|229084376|ref|ZP_04216656.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
Rock3-44]
gi|228698916|gb|EEL51621.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
Rock3-44]
Length = 360
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 64/152 (42%), Gaps = 19/152 (12%)
Query: 227 IDPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVIV 286
DP K ++ Y WG I Y K + AP W D W + G ++++N REV+
Sbjct: 131 FDPENK-YSLVYTWGVTGIAYNKKYVKE---APTS-WSDLWNEKYKGHVTLLNDSREVLG 185
Query: 287 AGGKI--------------AVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVL 332
G K +L L + FD+ + + F D W+ WS D
Sbjct: 186 MGLKKNGFSNSTKDDAQLKTAATDLQKLLPNLLAFDTDNIKQKFITEDAWIGTVWSGDAA 245
Query: 333 PAVKRMSNVAVVVPKSGASLWADLWAIPAASR 364
K +V VVPK G ++WAD AIP ++
Sbjct: 246 FIAKDNKDVGYVVPKEGGTIWADTLAIPKGAK 277
>gi|398895172|ref|ZP_10647050.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM55]
gi|398181368|gb|EJM68937.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM55]
Length = 362
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 75/180 (41%), Gaps = 32/180 (17%)
Query: 208 FKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIGYKKSKF-QNHNLAPIEDWKDP 266
F L K L ND G + PY WGT IGY K Q + I+ W
Sbjct: 103 FTNLDPKLLTLLEKNDPGNAH------SVPYLWGTNGIGYNVDKVKQVLGIDHIDSWAVL 156
Query: 267 WWPE-----LAGRISMVNSPREVIVA----GGKIAVQQN----------LALLANQVRLF 307
+ PE A +SM++S EV A G +N L + + F
Sbjct: 157 FEPENIKKLSACGVSMMDSADEVFPAILNYMGMDPRSENPEDFKKAEAKLLQIRPYITYF 216
Query: 308 DSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPA 361
S+ Y+ GD+ VA G+S DV A R N+A +PK GA+LW DL AIPA
Sbjct: 217 HSSKYVSDLANGDICVAFGYSGDVFQAANRAKEANNGVNIAYAIPKEGANLWFDLLAIPA 276
>gi|392957073|ref|ZP_10322598.1| family 1 extracellular solute-binding protein [Bacillus macauensis
ZFHKF-1]
gi|391876975|gb|EIT85570.1| family 1 extracellular solute-binding protein [Bacillus macauensis
ZFHKF-1]
Length = 357
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 67/151 (44%), Gaps = 21/151 (13%)
Query: 230 RGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVIVAGG 289
RG ++ PY WGT+ I Y K N N I W+D W +L +I +V+ RE++ G
Sbjct: 128 RGNTYSVPYFWGTVGIVYNKKLLGNKN---ITSWQDLWDKDLRNKIFLVDGVREIMGIGL 184
Query: 290 KIA--------------VQQNLALLANQVRLF--DSTHYLKAFGIGDVWVAVGWSSDVLP 333
++ L L VR D T L A G D + +GWS +
Sbjct: 185 TTTGYSLNDTNHQHLQKAKRKLDTLIPNVRAIVGDETKLLLANG--DASIGIGWSGNAAE 242
Query: 334 AVKRMSNVAVVVPKSGASLWADLWAIPAASR 364
+ ++ V+PK G++LW D IP ++
Sbjct: 243 IIDENPDLDYVIPKEGSNLWFDNMVIPKTAK 273
>gi|196040686|ref|ZP_03107985.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus cereus
NVH0597-99]
gi|229090340|ref|ZP_04221584.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
Rock3-42]
gi|196028476|gb|EDX67084.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus cereus
NVH0597-99]
gi|228693034|gb|EEL46751.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
Rock3-42]
Length = 349
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 64/152 (42%), Gaps = 19/152 (12%)
Query: 227 IDPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVIV 286
DP K ++ Y WG I Y K + AP W D W + G ++++N REV+
Sbjct: 120 FDPENK-YSLVYTWGVTGIAYNKKYVKE---APTS-WTDLWNEKYKGHVTLLNDSREVLG 174
Query: 287 AGGKI--------------AVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVL 332
G K +L L + FD+ + + F D W+ WS D
Sbjct: 175 MGLKKNGFSNSTKDDAQLKTAATDLQKLLPNLLAFDTDNIKQKFITEDAWIGTVWSGDAA 234
Query: 333 PAVKRMSNVAVVVPKSGASLWADLWAIPAASR 364
K +V VVPK G ++WAD AIP ++
Sbjct: 235 FIAKDNKDVEYVVPKEGGTIWADTLAIPKGAK 266
>gi|49480039|ref|YP_035515.1| spermidine/putrescine ABC transporter spermidine/putrescine-binding
protein [Bacillus thuringiensis serovar konkukian str.
97-27]
gi|52144048|ref|YP_082781.1| spermidine/putrescine ABC transporter spermidine/putrescine-binding
protein [Bacillus cereus E33L]
gi|118476862|ref|YP_894013.1| spermidine/putrescine ABC transporter substrate-binding protein
[Bacillus thuringiensis str. Al Hakam]
gi|196035369|ref|ZP_03102774.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus cereus
W]
gi|196046554|ref|ZP_03113779.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus cereus
03BB108]
gi|218902495|ref|YP_002450329.1| spermidine/putrescine ABC transporter substrate-binding protein
[Bacillus cereus AH820]
gi|225863250|ref|YP_002748628.1| spermidine/putrescine ABC transporter spermidine/putrescine-binding
protein [Bacillus cereus 03BB102]
gi|228913957|ref|ZP_04077581.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis serovar pulsiensis BGSC 4CC1]
gi|228926418|ref|ZP_04089490.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis serovar pondicheriensis BGSC 4BA1]
gi|228944986|ref|ZP_04107347.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis serovar monterrey BGSC 4AJ1]
gi|229120927|ref|ZP_04250169.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
95/8201]
gi|229183580|ref|ZP_04310804.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
BGSC 6E1]
gi|301052926|ref|YP_003791137.1| spermidine/putrescine ABC transporter substrate-binding protein
[Bacillus cereus biovar anthracis str. CI]
gi|376265229|ref|YP_005117941.1| ABC transporter, periplasmic spermidine putrescine-binding protein
PotD [Bacillus cereus F837/76]
gi|423552877|ref|ZP_17529204.1| hypothetical protein IGW_03508 [Bacillus cereus ISP3191]
gi|49331595|gb|AAT62241.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis serovar konkukian str. 97-27]
gi|51977517|gb|AAU19067.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus cereus
E33L]
gi|118416087|gb|ABK84506.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis str. Al Hakam]
gi|195992046|gb|EDX56009.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus cereus
W]
gi|196022738|gb|EDX61420.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus cereus
03BB108]
gi|218536733|gb|ACK89131.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus cereus
AH820]
gi|225787506|gb|ACO27723.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus cereus
03BB102]
gi|228599990|gb|EEK57586.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
BGSC 6E1]
gi|228662587|gb|EEL18185.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
95/8201]
gi|228814655|gb|EEM60915.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis serovar monterrey BGSC 4AJ1]
gi|228833242|gb|EEM78807.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis serovar pondicheriensis BGSC 4BA1]
gi|228845679|gb|EEM90706.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis serovar pulsiensis BGSC 4CC1]
gi|300375095|gb|ADK03999.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus cereus
biovar anthracis str. CI]
gi|364511029|gb|AEW54428.1| ABC transporter, periplasmic spermidine putrescine-binding protein
PotD [Bacillus cereus F837/76]
gi|401185490|gb|EJQ92584.1| hypothetical protein IGW_03508 [Bacillus cereus ISP3191]
Length = 349
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 64/152 (42%), Gaps = 19/152 (12%)
Query: 227 IDPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVIV 286
DP K ++ Y WG I Y K + AP W D W + G ++++N REV+
Sbjct: 120 FDPENK-YSLVYTWGVTGIAYNKKYVKE---APTS-WTDLWNEKYKGHVTLLNDSREVLG 174
Query: 287 AGGKI--------------AVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVL 332
G K +L L + FD+ + + F D W+ WS D
Sbjct: 175 MGLKKNGFSNSTKDDAQLKTAATDLQKLLPNLLAFDTDNIKQKFITEDAWIGTVWSGDAA 234
Query: 333 PAVKRMSNVAVVVPKSGASLWADLWAIPAASR 364
K +V VVPK G ++WAD AIP ++
Sbjct: 235 FIAKDNKDVEYVVPKEGGTIWADTLAIPKGAK 266
>gi|398854217|ref|ZP_10610791.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM80]
gi|398236715|gb|EJN22488.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM80]
Length = 362
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 75/180 (41%), Gaps = 32/180 (17%)
Query: 208 FKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIGYKKSKF-QNHNLAPIEDWKDP 266
FK L K L+ ND G + PY WGT IGY K Q + I+ W
Sbjct: 103 FKNLDPKLLELLQKNDPGNEH------SVPYLWGTNGIGYNVDKVKQVLGIDHIDSWAVL 156
Query: 267 WWPELAGR-----ISMVNSPREVIVA--------------GGKIAVQQNLALLANQVRLF 307
+ PE + +SM++S EV A + L + + F
Sbjct: 157 FEPENLKKLTQCGVSMMDSADEVFPAVLNYMGMDPRSENPEDYKKAEAKLLSIRPYITYF 216
Query: 308 DSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPA 361
S+ Y+ GD+ VA G+S DV A R N+A +PK GA+LW DL AIPA
Sbjct: 217 HSSKYVSDLANGDICVAFGYSGDVFQAANRAKEAKNGVNIAYAIPKEGANLWFDLLAIPA 276
>gi|359792822|ref|ZP_09295616.1| family 1 extracellular solute-binding protein [Mesorhizobium alhagi
CCNWXJ12-2]
gi|359251015|gb|EHK54425.1| family 1 extracellular solute-binding protein [Mesorhizobium alhagi
CCNWXJ12-2]
Length = 366
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 76/157 (48%), Gaps = 26/157 (16%)
Query: 234 WAAPYRWGTMAIGYKKSKFQNH-NLAPIEDWKDPWWPE----LAG-RISMVNSPREVI-- 285
++ + WGT+ IGY K + + ++ W + PE LAG + +++SP ++I
Sbjct: 127 YSVNWMWGTVGIGYNVDKVKEALGVDKVDSWDVFYKPENLAKLAGCGVYVLDSPSDIIPT 186
Query: 286 -----------VAGGKIA-VQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLP 333
+ A V++ L L +R F S+ Y+ A GD+ +A+GWS DV
Sbjct: 187 TLNYLGLSPESTSSEDFAKVEETLLALRPHIRKFHSSEYINALANGDICLAIGWSGDVFQ 246
Query: 334 AVKRMSN------VAVVVPKSGASLWADLWAIPAASR 364
A R + V V+PK GA +W D AIPA ++
Sbjct: 247 ARDRAAEADQGVVVDYVIPKEGAEMWFDQMAIPADAK 283
>gi|448747704|ref|ZP_21729359.1| Bacterial periplasmic spermidine/putrescine-binding protein
[Halomonas titanicae BH1]
gi|445564647|gb|ELY20764.1| Bacterial periplasmic spermidine/putrescine-binding protein
[Halomonas titanicae BH1]
Length = 369
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 74/160 (46%), Gaps = 29/160 (18%)
Query: 231 GKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGRIS-------MVNSP 281
G ++ PY WGT IGY + + + AP++ W + PE+ +S M++S
Sbjct: 124 GSEYSVPYMWGTNGIGYNVDRVKEILGDDAPVDSWALLFDPEITSALSEAGCGLSMLDSA 183
Query: 282 REVIVAG----GKIAVQQNL----------ALLANQVRLFDSTHYLKAFGIGDVWVAVGW 327
E++ G + +NL A + + + F S+ Y+ GD+ VA G+
Sbjct: 184 DEMLSPAMAYLGFDPLSENLDDIEAAGELIAEVRDDMTYFHSSRYVSDLANGDICVAAGY 243
Query: 328 SSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPA 361
S D+ A R +A +PK GA+LW D+ A+PA
Sbjct: 244 SGDIFQAADRAEEAGRDFTIAYSIPKEGAALWFDMMAVPA 283
>gi|402553230|ref|YP_006594501.1| spermidine/putrescine ABC transporter substrate-binding protein
[Bacillus cereus FRI-35]
gi|401794440|gb|AFQ08299.1| spermidine/putrescine ABC transporter substrate-binding protein
[Bacillus cereus FRI-35]
Length = 349
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 64/152 (42%), Gaps = 19/152 (12%)
Query: 227 IDPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVIV 286
DP K ++ Y WG I Y K + AP W D W + G ++++N REV+
Sbjct: 120 FDPENK-YSLVYTWGVTGIAYNKKYVKE---APTS-WADLWNEKYKGHVTLLNDSREVLG 174
Query: 287 AGGKI--------------AVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVL 332
G K +L L + FD+ + + F D W+ WS D
Sbjct: 175 MGLKKHGFSNSTKDDAQLKTAATDLQKLLPNLLAFDTDNIKQKFITEDAWIGTVWSGDAA 234
Query: 333 PAVKRMSNVAVVVPKSGASLWADLWAIPAASR 364
K +V VVPK G ++WAD AIP ++
Sbjct: 235 FIAKDNKDVEYVVPKEGGTIWADTLAIPKGAK 266
>gi|338738412|ref|YP_004675374.1| putrescine ABC transporter periplasmic-binding protein
[Hyphomicrobium sp. MC1]
gi|337758975|emb|CCB64800.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Hyphomicrobium sp. MC1]
Length = 372
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 86/182 (47%), Gaps = 31/182 (17%)
Query: 210 RLSHKW-KVYLRSNDAGEIDPRGKIWAAPYRWGTMAIGYKKSKFQNHNL-APIEDWKDPW 267
L + W +VY N + DP G +A + WGT +GY + K + AP+ +
Sbjct: 112 NLKYAWPEVY---NRIAQYDP-GNEYAVNWMWGTTGVGYNEGKIKERMADAPVNSLDMIF 167
Query: 268 WPELAGR-----ISMVNSPREVI-VAGGKIAVQQN-------------LALLANQVRLFD 308
PE+A + I M++SP ++I VA + + N L + ++ F
Sbjct: 168 KPEIAAKFKDCGIYMLDSPEDIIPVALNYLGLDPNTKNPEDFQKVEDMLLKIRPYIKKFH 227
Query: 309 STHYLKAFGIGDVWVAVGWSSDVLPAVKRMS---NVAVV---VPKSGASLWADLWAIPAA 362
S+ Y+ A GD +A+GWS D+L A R N V+ +PK G +W D+ AIPA
Sbjct: 228 SSEYINALANGDACMALGWSGDILQAASRAEEAKNGQVIKYNIPKEGTQMWFDMMAIPAD 287
Query: 363 SR 364
++
Sbjct: 288 AK 289
>gi|344341161|ref|ZP_08772083.1| extracellular solute-binding protein family 1 [Thiocapsa marina
5811]
gi|343799041|gb|EGV16993.1| extracellular solute-binding protein family 1 [Thiocapsa marina
5811]
Length = 367
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 80/193 (41%), Gaps = 41/193 (21%)
Query: 237 PYRWGTMAIGYKKSKFQNH--NLAPIEDWKDPWWPELAGR-----ISMVNSPREVIVAG- 288
PY WGT +G + K Q A ++ W + PE A + IS+++ P EV A
Sbjct: 130 PYMWGTSGLGINRDKIQAALGETADLDTWALVFDPETASKLGDCGISLLDDPTEVYSAAL 189
Query: 289 ---GKI----------AVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAV 335
GK A + + VR F S+ Y+ GD+ VA+G+S DV A
Sbjct: 190 AYLGKDPNSLDKDDLDAASALIKAIHPHVRYFHSSQYMSDLANGDLCVAMGYSGDVFQAQ 249
Query: 336 KRMSN------VAVVVPKSGASLWADLWAIPAASRLETKQIGGQVRGPSP-LIHQWIEFC 388
R + V+P+ GA++W D+ AIP P+P H +I +
Sbjct: 250 SRAEEAGKGVVIDYVIPREGAAVWTDVMAIPK-------------DAPNPAAAHAFIAYM 296
Query: 389 LQTARALPFKQEV 401
LQ A EV
Sbjct: 297 LQPAAIAAVSNEV 309
>gi|423472737|ref|ZP_17449480.1| hypothetical protein IEM_04042 [Bacillus cereus BAG6O-2]
gi|402427298|gb|EJV59407.1| hypothetical protein IEM_04042 [Bacillus cereus BAG6O-2]
Length = 349
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 63/152 (41%), Gaps = 19/152 (12%)
Query: 227 IDPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVIV 286
DP K ++ Y WG I Y K + P W D W + G ++++N REV+
Sbjct: 120 FDPENK-YSLVYTWGVTGIAYNKKYVKE---TPTS-WNDLWNEKYKGHVTLLNDSREVLG 174
Query: 287 AGGKI--------------AVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVL 332
G K +L L + FD+ + + F D W+ WS D
Sbjct: 175 MGLKKNGFSNSTKEDAQLKTASNDLQKLLPNLLAFDTDNIKQKFITEDAWIGTVWSGDAA 234
Query: 333 PAVKRMSNVAVVVPKSGASLWADLWAIPAASR 364
K +V VVPK G ++WAD AIP ++
Sbjct: 235 FIAKDNKDVGYVVPKEGGTIWADTLAIPKGAK 266
>gi|229074647|ref|ZP_04207670.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
Rock4-18]
gi|229095872|ref|ZP_04226851.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
Rock3-29]
gi|229101987|ref|ZP_04232701.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
Rock3-28]
gi|229114826|ref|ZP_04244240.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
Rock1-3]
gi|407703754|ref|YP_006827339.1| glycolate oxidase [Bacillus thuringiensis MC28]
gi|423380811|ref|ZP_17358095.1| hypothetical protein IC9_04164 [Bacillus cereus BAG1O-2]
gi|423443843|ref|ZP_17420749.1| hypothetical protein IEA_04173 [Bacillus cereus BAG4X2-1]
gi|423445901|ref|ZP_17422780.1| hypothetical protein IEC_00509 [Bacillus cereus BAG5O-1]
gi|423466935|ref|ZP_17443703.1| hypothetical protein IEK_04122 [Bacillus cereus BAG6O-1]
gi|423536331|ref|ZP_17512749.1| hypothetical protein IGI_04163 [Bacillus cereus HuB2-9]
gi|423538424|ref|ZP_17514815.1| hypothetical protein IGK_00516 [Bacillus cereus HuB4-10]
gi|423544663|ref|ZP_17521021.1| hypothetical protein IGO_01098 [Bacillus cereus HuB5-5]
gi|423625631|ref|ZP_17601409.1| hypothetical protein IK3_04229 [Bacillus cereus VD148]
gi|228668891|gb|EEL24319.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
Rock1-3]
gi|228681570|gb|EEL35733.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
Rock3-28]
gi|228687705|gb|EEL41604.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
Rock3-29]
gi|228708529|gb|EEL60679.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
Rock4-18]
gi|401132994|gb|EJQ40627.1| hypothetical protein IEC_00509 [Bacillus cereus BAG5O-1]
gi|401177008|gb|EJQ84200.1| hypothetical protein IGK_00516 [Bacillus cereus HuB4-10]
gi|401183638|gb|EJQ90750.1| hypothetical protein IGO_01098 [Bacillus cereus HuB5-5]
gi|401254469|gb|EJR60698.1| hypothetical protein IK3_04229 [Bacillus cereus VD148]
gi|401631563|gb|EJS49360.1| hypothetical protein IC9_04164 [Bacillus cereus BAG1O-2]
gi|402411975|gb|EJV44337.1| hypothetical protein IEA_04173 [Bacillus cereus BAG4X2-1]
gi|402414739|gb|EJV47066.1| hypothetical protein IEK_04122 [Bacillus cereus BAG6O-1]
gi|402461168|gb|EJV92882.1| hypothetical protein IGI_04163 [Bacillus cereus HuB2-9]
gi|407381439|gb|AFU11940.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis MC28]
Length = 349
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 64/152 (42%), Gaps = 19/152 (12%)
Query: 227 IDPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVIV 286
DP K ++ Y WG I Y K + AP W D W + G ++++N REV+
Sbjct: 120 FDPENK-YSLVYTWGVTGIAYNKKYVKE---APTS-WADLWNEKYKGHVTLLNDSREVLG 174
Query: 287 AGGKI--------------AVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVL 332
G K +L L + FD+ + + F D W+ WS D
Sbjct: 175 MGLKKHGFSNSTKDDAELKTAATDLQKLLPNLLAFDTDNIKQKFITEDAWIGTVWSGDAA 234
Query: 333 PAVKRMSNVAVVVPKSGASLWADLWAIPAASR 364
K +V VVPK G ++WAD AIP ++
Sbjct: 235 FIAKDNKDVEYVVPKEGGTIWADTLAIPKGAK 266
>gi|423618467|ref|ZP_17594301.1| hypothetical protein IIO_03793 [Bacillus cereus VD115]
gi|401254198|gb|EJR60434.1| hypothetical protein IIO_03793 [Bacillus cereus VD115]
Length = 349
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 64/152 (42%), Gaps = 19/152 (12%)
Query: 227 IDPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVIV 286
DP K ++ Y WG I Y K + AP W D W + G ++++N REV+
Sbjct: 120 FDPENK-YSLVYTWGVTGIAYNKKYVKE---APTS-WADLWNEKYKGHVTLLNDSREVLG 174
Query: 287 AGGKI--------------AVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVL 332
G K +L L + FD+ + + F D W+ WS D
Sbjct: 175 MGLKKHGFSNSTKDDAELKTAATDLQKLLPNLLAFDTDNIKQKFITEDAWIGTVWSGDAA 234
Query: 333 PAVKRMSNVAVVVPKSGASLWADLWAIPAASR 364
K +V VVPK G ++WAD AIP ++
Sbjct: 235 FIAKDNKDVEYVVPKEGGTIWADTLAIPKGAK 266
>gi|372269533|ref|ZP_09505581.1| transcription factor jumonji, jmjC [Marinobacterium stanieri S30]
Length = 366
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 79/182 (43%), Gaps = 41/182 (22%)
Query: 237 PYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNSPREVIVAGG 289
PY WGT IGY K + + P++ W+ + PE+ + +S+++ EV +A
Sbjct: 129 PYMWGTTGIGYNVKKVREILGDEMPLDTWRLVFDPEIVAKLEGCGVSLMDDATEVFIAAS 188
Query: 290 KIAVQQN-------LALLANQV-------RLFDSTHYLKAFGIGDVWVAVGWSSDVLPAV 335
Q + + AN V R F S+ Y+ GD+ VA G+S DVL A
Sbjct: 189 AYRGQDTADFSKAAIEVAANTVQAVRPYIRYFHSSQYINDLANGDLCVAHGYSGDVLQAR 248
Query: 336 KRMS------NVAVVVPKSGASLWADLWAIPAASRLETKQIGGQVRGPSP-LIHQWIEFC 388
R + VA VP GA +W D+ IP + P+P H++I +
Sbjct: 249 DRAAEAGNGVEVAYAVPSEGAVVWTDVMVIPKDA-------------PNPDAAHRFINYL 295
Query: 389 LQ 390
+Q
Sbjct: 296 MQ 297
>gi|406671762|ref|ZP_11079001.1| hypothetical protein HMPREF9706_01261 [Facklamia hominis CCUG
36813]
gi|405581012|gb|EKB55071.1| hypothetical protein HMPREF9706_01261 [Facklamia hominis CCUG
36813]
Length = 357
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 76/160 (47%), Gaps = 34/160 (21%)
Query: 227 IDPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVIV 286
DP G ++ PY WGT+ I Y SKF + I+ W D W PEL G++ M++ REV+
Sbjct: 126 FDP-GNHYSIPYFWGTLGIVYN-SKFIDE--GDIQSWDDLWKPELRGKVMMIDGAREVLG 181
Query: 287 AG----------------------GKIAVQQNLALLANQVRLFDSTHYLKAFGIGDVWVA 324
G K + ALLA++++++ + + +A
Sbjct: 182 IGLQSQGWSLNETDSQRLQKSADKMKTLMPNIQALLADEIKMY--------LAMEESPIA 233
Query: 325 VGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 364
V +S + A++ N+ +VP+ G+++W D AIP ++
Sbjct: 234 VTYSGEAAMAMEENENLCYLVPQEGSNIWFDNLAIPKGAK 273
>gi|146305165|ref|YP_001185630.1| extracellular solute-binding protein [Pseudomonas mendocina ymp]
gi|145573366|gb|ABP82898.1| extracellular solute-binding protein, family 1 [Pseudomonas
mendocina ymp]
Length = 364
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 110/262 (41%), Gaps = 42/262 (16%)
Query: 138 LRVVSLQNSVPQSWVKDFMRSQGKRLK---FQMNLCASIDGIVNN----LSTPFNK-LSF 189
LRV + + + KDF R G R+ F+ N + N L P N+ L
Sbjct: 27 LRVYNWADYILPEVPKDFQRESGIRITWDTFETNEALEAKLLTGNSGYDLVIPSNQFLET 86
Query: 190 AIKKRFIEPIAEAEDQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIGYKK 249
IK P+ +++ +W K L L ND G + PY +GT+ IGY
Sbjct: 87 QIKAGVFAPLDKSKLPNW-KNLDPVLLGLLEKNDPG------NQYGVPYMYGTVLIGYNP 139
Query: 250 SKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNSPREVI-VAGGKIAVQQNLALLA 301
K + + AP+ W + PE + ++M++SP E+I +A + + N + A
Sbjct: 140 DKVKAALGDDAPVNSWDLVFKPEYMEKLKSCGVAMLDSPTEIIPIALHYLGLDPNSSNPA 199
Query: 302 NQ-------------VRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRM---SNVAVV- 344
+ V F S Y+ GD+ VA+G+S R N V+
Sbjct: 200 DYDKVTELLLKVRPYVAYFHSAKYMTDIANGDICVAIGYSGSFYQFANRAKEAGNGVVIN 259
Query: 345 --VPKSGASLWADLWAIPAASR 364
+PK GA +W D WAIP +++
Sbjct: 260 WRLPKEGAPIWFDTWAIPKSAQ 281
>gi|423455165|ref|ZP_17432018.1| hypothetical protein IEE_03909 [Bacillus cereus BAG5X1-1]
gi|401134948|gb|EJQ42555.1| hypothetical protein IEE_03909 [Bacillus cereus BAG5X1-1]
Length = 349
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 63/152 (41%), Gaps = 19/152 (12%)
Query: 227 IDPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVIV 286
DP K ++ Y WG I Y K + P W D W + G ++++N REV+
Sbjct: 120 FDPENK-YSLVYTWGVTGIAYNKKYVKE---TPTS-WNDLWNEKYKGHVTLLNDSREVLG 174
Query: 287 AGGKI--------------AVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVL 332
G K +L L + FD+ + + F D W+ WS D
Sbjct: 175 MGLKKNGFSNSTKEDAQLKTASNDLQKLLPNLLAFDTDNIKQKFITEDAWIGTVWSGDAA 234
Query: 333 PAVKRMSNVAVVVPKSGASLWADLWAIPAASR 364
K +V VVPK G ++WAD AIP ++
Sbjct: 235 FIAKDNKDVGYVVPKEGGTIWADTLAIPKGAK 266
>gi|42780475|ref|NP_977722.1| spermidine/putrescine ABC transporter substrate-binding protein
[Bacillus cereus ATCC 10987]
gi|42736394|gb|AAS40330.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus cereus
ATCC 10987]
Length = 349
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 64/152 (42%), Gaps = 19/152 (12%)
Query: 227 IDPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVIV 286
DP K ++ Y WG I Y K + AP W D W + G ++++N REV+
Sbjct: 120 FDPENK-YSLVYTWGVTGIAYNKKYVKE---APTS-WADLWNEKYKGHVTLLNDSREVLG 174
Query: 287 AGGKI--------------AVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVL 332
G K +L L + FD+ + + F D W+ WS D
Sbjct: 175 MGLKKHGFSNSTKDDAQLKTAATDLQKLLPNLLAFDTDNIKQKFITEDAWIGTVWSGDAA 234
Query: 333 PAVKRMSNVAVVVPKSGASLWADLWAIPAASR 364
K +V VVPK G ++WAD AIP ++
Sbjct: 235 FIAKDNKDVEYVVPKEGGTIWADTLAIPKGAK 266
>gi|384179321|ref|YP_005565083.1| spermidine/putrescine ABC transporter spermidine/putrescine-binding
protein [Bacillus thuringiensis serovar finitimus
YBT-020]
gi|324325405|gb|ADY20665.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis serovar finitimus YBT-020]
Length = 349
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 64/152 (42%), Gaps = 19/152 (12%)
Query: 227 IDPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVIV 286
DP K ++ Y WG I Y K + AP W D W + G ++++N REV+
Sbjct: 120 FDPENK-YSLVYTWGVTGIAYNKKYVKE---APTS-WADLWNEKYKGHVTLLNDSREVLG 174
Query: 287 AGGKI--------------AVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVL 332
G K +L L + FD+ + + F D W+ WS D
Sbjct: 175 MGLKKHGFSNSTKDDAQLKTAATDLQKLLPNLLAFDTDNIKQKFITEDAWIGTVWSGDAA 234
Query: 333 PAVKRMSNVAVVVPKSGASLWADLWAIPAASR 364
K +V VVPK G ++WAD AIP ++
Sbjct: 235 FIAKDNKDVEYVVPKEGGTIWADTLAIPKGAK 266
>gi|423609801|ref|ZP_17585662.1| hypothetical protein IIM_00516 [Bacillus cereus VD107]
gi|401250283|gb|EJR56584.1| hypothetical protein IIM_00516 [Bacillus cereus VD107]
Length = 349
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 64/152 (42%), Gaps = 19/152 (12%)
Query: 227 IDPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVIV 286
DP K ++ Y WG I Y K + AP W D W + G ++++N REV+
Sbjct: 120 FDPENK-YSLVYTWGVTGIAYNKKYVKE---APTS-WADLWNDKYKGHVTLLNDSREVLG 174
Query: 287 AGGKI--------------AVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVL 332
G K +L L + FD+ + + F D W+ WS D
Sbjct: 175 MGLKKNGFSNSTKDDAQLKTAATDLQKLLPNLLAFDTDNIKQKFITEDAWIGTVWSGDAA 234
Query: 333 PAVKRMSNVAVVVPKSGASLWADLWAIPAASR 364
K +V VVPK G ++WAD AIP ++
Sbjct: 235 FIAKDNKDVEYVVPKEGGTIWADTLAIPKGAK 266
>gi|423576894|ref|ZP_17553013.1| hypothetical protein II9_04115 [Bacillus cereus MSX-D12]
gi|423606908|ref|ZP_17582801.1| hypothetical protein IIK_03489 [Bacillus cereus VD102]
gi|401206644|gb|EJR13432.1| hypothetical protein II9_04115 [Bacillus cereus MSX-D12]
gi|401241098|gb|EJR47490.1| hypothetical protein IIK_03489 [Bacillus cereus VD102]
Length = 349
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 64/152 (42%), Gaps = 19/152 (12%)
Query: 227 IDPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVIV 286
DP K ++ Y WG I Y K + AP W D W + G ++++N REV+
Sbjct: 120 FDPENK-YSLVYTWGVTGIAYNKKYVKE---APTS-WADLWNEKYKGHVTLLNDSREVLG 174
Query: 287 AGGKI--------------AVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVL 332
G K +L L + FD+ + + F D W+ WS D
Sbjct: 175 MGLKKHGFSNSTKDDAQLKTAATDLQKLLPNLLAFDTDNIKQKFITEDAWIGTVWSGDAA 234
Query: 333 PAVKRMSNVAVVVPKSGASLWADLWAIPAASR 364
K +V VVPK G ++WAD AIP ++
Sbjct: 235 FIAKDNKDVEYVVPKEGGTIWADTLAIPKGAK 266
>gi|206977547|ref|ZP_03238441.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus cereus
H3081.97]
gi|217958863|ref|YP_002337411.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus cereus
AH187]
gi|222095022|ref|YP_002529082.1| spermidine/putrescine ABC transporter substrate-binding protein
[Bacillus cereus Q1]
gi|375283358|ref|YP_005103796.1| spermidine/putrescine ABC transporter substrate-binding protein
[Bacillus cereus NC7401]
gi|423354129|ref|ZP_17331755.1| hypothetical protein IAU_02204 [Bacillus cereus IS075]
gi|423371369|ref|ZP_17348709.1| hypothetical protein IC5_00425 [Bacillus cereus AND1407]
gi|423569696|ref|ZP_17545942.1| hypothetical protein II7_02918 [Bacillus cereus MSX-A12]
gi|206744265|gb|EDZ55678.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus cereus
H3081.97]
gi|217065950|gb|ACJ80200.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus cereus
AH187]
gi|221239080|gb|ACM11790.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus cereus
Q1]
gi|358351884|dbj|BAL17056.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus cereus
NC7401]
gi|401087330|gb|EJP95534.1| hypothetical protein IAU_02204 [Bacillus cereus IS075]
gi|401103195|gb|EJQ11180.1| hypothetical protein IC5_00425 [Bacillus cereus AND1407]
gi|401205915|gb|EJR12713.1| hypothetical protein II7_02918 [Bacillus cereus MSX-A12]
Length = 349
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 64/152 (42%), Gaps = 19/152 (12%)
Query: 227 IDPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVIV 286
DP K ++ Y WG I Y K + AP W D W + G ++++N REV+
Sbjct: 120 FDPENK-YSLVYTWGVTGIAYNKKYVKE---APTS-WADLWNEKYKGHVTLLNDSREVLG 174
Query: 287 AGGKI--------------AVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVL 332
G K +L L + FD+ + + F D W+ WS D
Sbjct: 175 MGLKKHGFSNSTKDDAQLKTAATDLQKLLPNLLAFDTDNIKQKFITEDAWIGTVWSGDAA 234
Query: 333 PAVKRMSNVAVVVPKSGASLWADLWAIPAASR 364
K +V VVPK G ++WAD AIP ++
Sbjct: 235 FIAKDNKDVEYVVPKEGGTIWADTLAIPKGAK 266
>gi|423392318|ref|ZP_17369544.1| hypothetical protein ICG_04166 [Bacillus cereus BAG1X1-3]
gi|401634965|gb|EJS52727.1| hypothetical protein ICG_04166 [Bacillus cereus BAG1X1-3]
Length = 349
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 64/152 (42%), Gaps = 19/152 (12%)
Query: 227 IDPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVIV 286
DP K ++ Y WG I Y K + AP W D W + G ++++N REV+
Sbjct: 120 FDPENK-YSLVYTWGVTGIAYNKKYVKE---APTS-WNDLWNEKYKGHVTLLNDSREVLG 174
Query: 287 AGGKI--------------AVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVL 332
G K +L L + FD+ + + F D W+ WS D
Sbjct: 175 MGLKKNGFSNSTKEDAQLKTASADLQKLLPNLLAFDTDNIKQKFITEDAWIGTVWSGDAA 234
Query: 333 PAVKRMSNVAVVVPKSGASLWADLWAIPAASR 364
K +V +VPK G ++WAD AIP ++
Sbjct: 235 FIAKDNKDVEYIVPKEGGTIWADTLAIPKGAK 266
>gi|359786979|ref|ZP_09290052.1| extracellular solute-binding protein [Halomonas sp. GFAJ-1]
gi|359295745|gb|EHK60007.1| extracellular solute-binding protein [Halomonas sp. GFAJ-1]
Length = 367
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 95/229 (41%), Gaps = 47/229 (20%)
Query: 230 RGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGRISMVNSPREVIVA 287
+G ++ PY WGT +GY + + AP++ W + PE+ +++ ++ +
Sbjct: 121 QGSEYSVPYMWGTNGLGYNVDRVTEILGDDAPLDSWALLFDPEITTQLNDAGCGLAMLDS 180
Query: 288 GGKI---------------------AVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVG 326
G ++ A + +A + + F S+ Y+ GD+ VA G
Sbjct: 181 GDEMLSPAMAYLGLSPLSENIEDLEAAGELIAAIRGNITYFHSSRYVSDLANGDICVAAG 240
Query: 327 WSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPA-ASRLETKQIGGQVRGPSP 379
+S D+ A R + +PK GA+LW D+ AIPA A E
Sbjct: 241 YSGDIFQAADRAEEAGRDFTIGYSIPKEGAALWFDMMAIPADAPNTENA----------- 289
Query: 380 LIHQWIEFCLQTARALPFKQEVIPGASPSALESTLVKLPEELLKGKPSV 428
H +I F L+ A E + A+P+A + V EELL P+V
Sbjct: 290 --HAFINFILEPEIAAEIS-EYVRYANPNAAANEFVS--EELLN-DPAV 332
>gi|333900395|ref|YP_004474268.1| extracellular solute-binding protein [Pseudomonas fulva 12-X]
gi|333115660|gb|AEF22174.1| extracellular solute-binding protein family 1 [Pseudomonas fulva
12-X]
Length = 361
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 80/164 (48%), Gaps = 28/164 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPW----WPELAG-RISMVNS 280
DP G +A PY WGT+ +GY K + AP++ W+ + +L G ++ +++
Sbjct: 116 DP-GNKYAVPYMWGTVGVGYNAEKVRAALGEGAPVDSWELVFNAGNLAKLKGCGVAFLDA 174
Query: 281 PREVI-VAGGKIAVQQN-------------LALLANQVRLFDSTHYLKAFGIGDVWVAVG 326
P ++I A + + N L LA V F S+ Y+ GD+ VAVG
Sbjct: 175 PVKIIPQALHYLGMDPNSHDPDDYTKASALLQKLAPSVTYFHSSRYISDLANGDICVAVG 234
Query: 327 WSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
+S DV+ A R ++ V+PK GA+LW D+ AIP +R
Sbjct: 235 YSGDVMQAQSRAKDAGKSVDIRYVIPKEGANLWFDMLAIPCDAR 278
>gi|229029058|ref|ZP_04185157.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
AH1271]
gi|228732338|gb|EEL83221.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
AH1271]
Length = 349
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 64/152 (42%), Gaps = 19/152 (12%)
Query: 227 IDPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVIV 286
DP K ++ Y WG I Y K + AP W D W + G ++++N REV+
Sbjct: 120 FDPENK-YSLVYTWGVTGIAYNKKYVKE---APTS-WADLWNEKYKGHVTLLNDSREVLG 174
Query: 287 AGGKI--------------AVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVL 332
G K +L L + FD+ + + F D W+ WS D
Sbjct: 175 MGLKKHGFSNSTKDDAQLKTAATDLQKLLPNLLAFDTDNIKQKFITEDAWIGTVWSGDAA 234
Query: 333 PAVKRMSNVAVVVPKSGASLWADLWAIPAASR 364
K +V VVPK G ++WAD AIP ++
Sbjct: 235 FIAKDNKDVEYVVPKEGGTIWADTLAIPKGAK 266
>gi|229154954|ref|ZP_04283068.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
ATCC 4342]
gi|228628512|gb|EEK85225.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
ATCC 4342]
Length = 349
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 64/152 (42%), Gaps = 19/152 (12%)
Query: 227 IDPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVIV 286
DP K ++ Y WG I Y K + AP W D W + G ++++N REV+
Sbjct: 120 FDPENK-YSLVYTWGVTGIAYNKKYVKE---APTS-WADLWNEKYKGHVTLLNDSREVLG 174
Query: 287 AGGKI--------------AVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVL 332
G K +L L + FD+ + + F D W+ WS D
Sbjct: 175 MGLKKHGFSNSTKDDAQLKTAATDLQKLLPNLLAFDTDNIKQKFITEDAWIGTVWSGDAA 234
Query: 333 PAVKRMSNVAVVVPKSGASLWADLWAIPAASR 364
K +V VVPK G ++WAD AIP ++
Sbjct: 235 FIAKDNKDVEYVVPKEGGTIWADTLAIPKGAK 266
>gi|423555852|ref|ZP_17532155.1| hypothetical protein II3_01057 [Bacillus cereus MC67]
gi|401196194|gb|EJR03140.1| hypothetical protein II3_01057 [Bacillus cereus MC67]
Length = 349
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 63/152 (41%), Gaps = 19/152 (12%)
Query: 227 IDPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVIV 286
DP K ++ Y WG I Y K + P W D W + G ++++N REV+
Sbjct: 120 FDPENK-YSLVYTWGVTGIAYNKKYVKE---TPTS-WNDLWNEKYKGHVTLLNDSREVLG 174
Query: 287 AGGKI--------------AVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVL 332
G K +L L + FD+ + + F D W+ WS D
Sbjct: 175 MGLKKNGFSNSTKEDAQLKTASNDLQKLLPNLLAFDTDNIKQKFITEDAWIGTVWSGDAA 234
Query: 333 PAVKRMSNVAVVVPKSGASLWADLWAIPAASR 364
K +V VVPK G ++WAD AIP ++
Sbjct: 235 FIAKDNKDVGYVVPKEGGTIWADTLAIPKGAK 266
>gi|398921988|ref|ZP_10660067.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM49]
gi|398163704|gb|EJM51855.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM49]
Length = 362
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 76/180 (42%), Gaps = 32/180 (17%)
Query: 208 FKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIGYKKSKF-QNHNLAPIEDWKDP 266
FK L K L ND G + PY WGT IGY K Q + I+ W
Sbjct: 103 FKNLDPKLLALLEKNDPGNEH------SVPYLWGTNGIGYNVDKVKQVLGIDHIDSWAVL 156
Query: 267 WWPE-----LAGRISMVNSPREVIVA----GGKIAVQQN----------LALLANQVRLF 307
+ PE A +SM++S EV + G +N L + + F
Sbjct: 157 FEPENIKKLSACGVSMMDSADEVFPSILNYMGMDPRSENPEDFKKAEARLLAIRPYITYF 216
Query: 308 DSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPA 361
S+ Y+ GD+ VA G+S DV A R N+A +PK GA+LW DL A+PA
Sbjct: 217 HSSKYVSDLANGDICVAFGYSGDVFQAANRAKEAKNGVNIAYAIPKEGANLWFDLLAVPA 276
>gi|357417210|ref|YP_004930230.1| family 1 extracellular solute-binding protein [Pseudoxanthomonas
spadix BD-a59]
gi|355334788|gb|AER56189.1| family 1 extracellular solute-binding protein [Pseudoxanthomonas
spadix BD-a59]
Length = 381
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 77/166 (46%), Gaps = 32/166 (19%)
Query: 228 DPRGKIWAAPYRWGTMAIGYK----KSKFQNHNLAPIEDWKDPWWPELAGR-----ISMV 278
DP G +A PY WGT IGY K+ F N ++A W + PE + ++ +
Sbjct: 136 DP-GNRYAVPYMWGTTGIGYNVDKVKAAFGNTDVA--NSWDLVFKPENLAKLKDCGVTFL 192
Query: 279 NSPREVI-VAGGKIA----------VQQNLALLAN---QVRLFDSTHYLKAFGIGDVWVA 324
++P E++ +A + + + ALL + F S+ Y+ A GD +
Sbjct: 193 DTPSEIVPIALNYLGEDPNSTDPKVIDKAAALLKTIRPSISQFHSSSYIDAMANGDTCLV 252
Query: 325 VGWSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIPAASR 364
VGWS DV+ A R +A +PK GA LW D+ AIP +R
Sbjct: 253 VGWSGDVIQARDRAEEAGNGVKIAYSIPKEGAPLWFDMLAIPKDAR 298
>gi|421615517|ref|ZP_16056541.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas stutzeri KOS6]
gi|409782590|gb|EKN62145.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas stutzeri KOS6]
Length = 361
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 71/160 (44%), Gaps = 27/160 (16%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQNH-NLAPIEDWKDPWWPELAGR-----ISMVNSP 281
DP G AAPY WGT IGY K + + I+ W + PE A + I+ ++S
Sbjct: 117 DP-GNAHAAPYLWGTNGIGYNVEKVKAALGVDKIDSWAVIFEPENAAKLASCGIAFLDSA 175
Query: 282 REVI--------------VAGGKIAVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGW 327
E+I A ++ L + VR F S+ Y+ G++ VA G+
Sbjct: 176 DEMIPAMLNYLGLDPNSENAADYRKAEEKLLAVRPHVRYFHSSKYISDLANGNICVAAGF 235
Query: 328 SSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIPA 361
S DV A R +A +PK G +LW D+ AIPA
Sbjct: 236 SGDVFQAAARAEEAGKGVEIAYAIPKEGGNLWFDMLAIPA 275
>gi|398865909|ref|ZP_10621415.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM78]
gi|398242096|gb|EJN27723.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM78]
Length = 362
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 74/180 (41%), Gaps = 32/180 (17%)
Query: 208 FKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIGYKKSKF-QNHNLAPIEDWKDP 266
FK L K L ND G + PY WGT IGY K Q + I+ W
Sbjct: 103 FKNLDPKLLALLEKNDPGNEH------SVPYLWGTNGIGYNVDKVKQVLGIDHIDSWAVL 156
Query: 267 WWPELAGR-----ISMVNSPREVIVAGGKIA--------------VQQNLALLANQVRLF 307
+ PE + +SM++S EV A + L + + F
Sbjct: 157 FEPENIKKLSQCGVSMMDSADEVFPAVLNYMGMDPRSENPEDFKKAEAKLLSIRPYITYF 216
Query: 308 DSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPA 361
S+ Y+ GD+ VA G+S DV A R N+A +PK G++LW DL AIPA
Sbjct: 217 HSSKYVSDLANGDICVAFGYSGDVFQAANRAKEARNGVNIAYAIPKEGSNLWFDLLAIPA 276
>gi|238751802|ref|ZP_04613289.1| Putrescine-binding periplasmic protein [Yersinia rohdei ATCC 43380]
gi|238709931|gb|EEQ02162.1| Putrescine-binding periplasmic protein [Yersinia rohdei ATCC 43380]
Length = 369
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 76/168 (45%), Gaps = 29/168 (17%)
Query: 225 GEIDPRGKIWAAPYRWGTMAIGY--KKSKFQNHNLAPIEDWKDPWWPELAGR-----ISM 277
G+ DP K +A PY W T IGY +K K AP+ W PE + +S
Sbjct: 120 GKHDPENK-FAVPYLWATTGIGYNVEKVKAALGTDAPVNSWDLVLKPENLEKLKSCGVSF 178
Query: 278 VNSPREV--------------IVAGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVW 322
+++P E+ I A L L L +R F S+ Y+ GD+
Sbjct: 179 LDAPSEIFATVLNYLGKDPNSIQATDYTGPATELLLKLRPNIRYFHSSQYINDLANGDIC 238
Query: 323 VAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
VAVGW+ D+L A R NVA +PK GA + D++A+PA ++
Sbjct: 239 VAVGWAGDILQASNRAKEANNGVNVAYSIPKEGALAFFDVFAMPADAK 286
>gi|407364788|ref|ZP_11111320.1| extracellular solute-binding protein [Pseudomonas mandelii JR-1]
Length = 362
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 77/180 (42%), Gaps = 32/180 (17%)
Query: 208 FKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIGYKKSKF-QNHNLAPIEDWKDP 266
FK L K L ND G + PY WGT IGY K Q + I+ W+
Sbjct: 103 FKNLDPKLLALLEKNDPGNEH------SVPYLWGTNGIGYNVDKVKQVLGIDRIDSWEVL 156
Query: 267 WWPELAGR-----ISMVNSPREVIVA----GGKIAVQQN----------LALLANQVRLF 307
+ PE + +SM++S EV A G +N L + + F
Sbjct: 157 FEPENIKKLSQCGVSMMDSADEVFPAILNYMGMDPRSENPEDFKKAEAKLLSIRPYITYF 216
Query: 308 DSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPA 361
S+ Y+ GD+ VA G+S DV A R N+A +PK G++LW DL AIPA
Sbjct: 217 HSSKYVSDLANGDICVAFGYSGDVFQAANRAKEAKNGVNIAYAIPKEGSNLWFDLLAIPA 276
>gi|392423251|ref|YP_006459855.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas stutzeri CCUG 29243]
gi|390985439|gb|AFM35432.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas stutzeri CCUG 29243]
Length = 361
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 73/159 (45%), Gaps = 27/159 (16%)
Query: 235 AAPYRWGTMAIGYKKSKFQNH-NLAPIEDWKDPWWPELAGR-----ISMVNSPREVI--- 285
AAPY WGT IGY K + + I+ W + PE A + I+ ++S E+I
Sbjct: 123 AAPYLWGTNGIGYNVEKVKAALGVDTIDSWAVIFEPENAEKLASCGIAFLDSADEMIPAM 182
Query: 286 -----------VAGGKIAVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPA 334
A ++ L + VR F S+ Y+ G++ VA G+S DV A
Sbjct: 183 LNYLGLDPNSENAADYQKAEEKLLAVRPHVRYFHSSKYISDLANGNICVAAGFSGDVFQA 242
Query: 335 VKRMSN------VAVVVPKSGASLWADLWAIPA-ASRLE 366
R +A +PK GA+LW D+ AIPA AS +E
Sbjct: 243 AARAEEAGKGVEIAYAIPKEGANLWFDMLAIPADASNVE 281
>gi|409396642|ref|ZP_11247622.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas sp. Chol1]
gi|409118824|gb|EKM95215.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas sp. Chol1]
Length = 361
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 72/160 (45%), Gaps = 27/160 (16%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQNH-NLAPIEDWKDPWWPELAGR-----ISMVNSP 281
DP G AAPY WGT IGY K + + I+ W + P+ A + I+M++S
Sbjct: 117 DP-GNAHAAPYLWGTNGIGYNVEKVKAALGVDTIDSWAVLFEPQNAEKLASCGIAMLDSA 175
Query: 282 REVIVA--------------GGKIAVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGW 327
E+I A ++ L + VR F S+ Y+ G++ VA G+
Sbjct: 176 DEMIPAMLNYLGLDPNSENPADYRKAEEKLLAVRPHVRYFHSSKYISDLANGNICVAAGF 235
Query: 328 SSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIPA 361
S DV A R +A +PK G +LW D+ AIPA
Sbjct: 236 SGDVFQAAARAEEAGKGIEIAYAIPKEGGNLWFDMLAIPA 275
>gi|239834302|ref|ZP_04682630.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301]
gi|239822365|gb|EEQ93934.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301]
Length = 381
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 114/270 (42%), Gaps = 42/270 (15%)
Query: 131 TYALTVPLRVVSLQN---SVPQSWVKDFMRSQGKRLKFQMNLCASI-------DGIVNNL 180
T++ + RVV++ N + S +KDF + G ++ + + I G +L
Sbjct: 35 TFSASAQERVVNIYNWSDYIDDSILKDFTKETGIKVVYDVYDSNEILETKLLAGGSGYDL 94
Query: 181 STPFNKLSFAIKKRFIEPIAEAEDQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRW 240
P + + ++ + D+D L + W S A DP G ++ Y W
Sbjct: 95 VVPSGEF---LGRQIPAGVFLKLDKDKLPNLKNMWDEI--STRAATYDP-GNEYSVNYMW 148
Query: 241 GTMAIGYKKSKFQNH-NLAPIEDWKDPWWPELAGR-----ISMVNSPREVIVAG------ 288
GT IGY K+K + I+ W + PE + + I +++S E++
Sbjct: 149 GTTGIGYNKAKIKEALGTDTIDSWAVLFDPEQSAKLKDCGIYLLDSASEMLRPALNYLGL 208
Query: 289 -------GKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS- 339
+ Q+L L + +R F S+ Y+ A GD+ +AVG+S D+ A R
Sbjct: 209 DPNSPSPDDLQKAQDLYLKIRPNIRKFHSSEYINALANGDICMAVGYSGDIFQARDRAEK 268
Query: 340 -----NVAVVVPKSGASLWADLWAIPAASR 364
+ +PK GA +W D AIPA ++
Sbjct: 269 AKQGVEIGYSIPKEGALMWFDQMAIPADAK 298
>gi|157961031|ref|YP_001501065.1| extracellular solute-binding protein [Shewanella pealeana ATCC
700345]
gi|157846031|gb|ABV86530.1| extracellular solute-binding protein family 1 [Shewanella pealeana
ATCC 700345]
Length = 361
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 72/157 (45%), Gaps = 26/157 (16%)
Query: 234 WAAPYRWGTMAIGYKKSKF-QNHNLAPIEDWKDPWWPELAGRIS-----MVNSPREVIVA 287
+A PY WGT IGY K Q P+ W+ + E + S MV++P EV+ A
Sbjct: 122 YAVPYMWGTTGIGYNIDKAAQILGEQPLNTWELLFQAETVSKFSECGVAMVDAPSEVVSA 181
Query: 288 G----GKIAVQQNLA--------LLANQ--VRLFDSTHYLKAFGIGDVWVAVGWSSDVLP 333
GK QNL LLA + + F S+ Y+ G++ +A+GWS DV
Sbjct: 182 MLKYLGKNPNSQNLDDLKLVEERLLAIRPYITYFHSSSYVTDLASGNICLAMGWSGDVFM 241
Query: 334 AVKRM------SNVAVVVPKSGASLWADLWAIPAASR 364
A R NV V+PK GA WAD + I S+
Sbjct: 242 AANRALEANNGVNVDYVIPKEGAQGWADTFNITNDSK 278
>gi|423204840|ref|ZP_17191396.1| hypothetical protein HMPREF1168_01031 [Aeromonas veronii AMC34]
gi|404625716|gb|EKB22531.1| hypothetical protein HMPREF1168_01031 [Aeromonas veronii AMC34]
Length = 361
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 90/207 (43%), Gaps = 31/207 (14%)
Query: 226 EIDPRGKIWAAPYRWGTMAIGYKKSKFQN-HNLAPIEDWKDPWWPELAGRIS-----MVN 279
++DP G +A PY WGT IGY K + + I+ W + PE ++S ++
Sbjct: 115 KVDP-GHQYAVPYLWGTNGIGYNVDKIKAVLGVDKIDSWATIFEPENMEKLSRCGVAFLD 173
Query: 280 SPREVIVAG-----------GKIAVQQNLALLAN---QVRLFDSTHYLKAFGIGDVWVAV 325
S E+I A ++Q ALL V F S+ Y+ GD+ VA
Sbjct: 174 SADEMIPAALNYLGLDPNSHATGDIKQAEALLLKVRPYVAYFHSSKYIGDLANGDICVAA 233
Query: 326 GWSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIP--AASRLETKQIGGQVRGP 377
G+S D+L A R +A +PK G +LW D+ AIP A + E + V P
Sbjct: 234 GFSGDILQAAARADEAGKGVKIAYSIPKEGGNLWFDMMAIPSDATNVKEAHALINYVLQP 293
Query: 378 SPL--IHQWIEFCLQTARALPFKQEVI 402
+ + ++ + +RA F E +
Sbjct: 294 EVIAKVSDYVGYANPNSRAGEFMDEAV 320
>gi|398882696|ref|ZP_10637662.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM60]
gi|398198363|gb|EJM85321.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM60]
Length = 362
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 74/180 (41%), Gaps = 32/180 (17%)
Query: 208 FKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIGYKKSKF-QNHNLAPIEDWKDP 266
FK L K L ND G + PY WGT IGY K Q + I+ W
Sbjct: 103 FKNLDPKLLALLEKNDPGNEH------SVPYLWGTNGIGYNVDKVKQVLGIDHIDSWAVL 156
Query: 267 WWPELAGR-----ISMVNSPREVIVA--------------GGKIAVQQNLALLANQVRLF 307
+ PE + +SM++S EV A + L + + F
Sbjct: 157 FEPENIKKLSQCGVSMMDSADEVFPAILNYMGMDPRSENPEDYKKAEAKLLSIRPYITYF 216
Query: 308 DSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPA 361
S+ Y+ GD+ VA G+S DV A R N+A +PK G++LW DL AIPA
Sbjct: 217 HSSKYVSDLANGDICVAFGYSGDVFQAANRAKEAKNGVNIAYAIPKEGSNLWFDLLAIPA 276
>gi|260565904|ref|ZP_05836374.1| extracellular solute-binding protein family 1 [Brucella suis bv. 4
str. 40]
gi|260155422|gb|EEW90502.1| extracellular solute-binding protein family 1 [Brucella suis bv. 4
str. 40]
Length = 374
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 113/270 (41%), Gaps = 42/270 (15%)
Query: 131 TYALTVPLRVVSLQN---SVPQSWVKDFMRSQGKRLKFQMNLCASI-------DGIVNNL 180
T++ RVV++ N + S +KDF + G ++ + + I G +L
Sbjct: 28 TFSAGAQERVVNIYNWSDYIDDSILKDFTKETGIKVVYDVYDSNEILETKLLAGGSGYDL 87
Query: 181 STPFNKLSFAIKKRFIEPIAEAEDQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRW 240
P + + ++ + D+D L + W S A DP G ++A Y W
Sbjct: 88 VVPSGEF---LGRQIPAGVFLKLDKDKLPNLKNMWDEI--STRAATYDP-GNEYSANYMW 141
Query: 241 GTMAIGYKKSKFQNH-NLAPIEDWKDPWWPELAGR-----ISMVNSPREVIVAG------ 288
GT IGY K+K + I+ W + PE + I +++S E++
Sbjct: 142 GTTGIGYNKAKIKEALGTDTIDSWDVLFDPEKTAKLKDCGIYLLDSASEMLRPALNYLGL 201
Query: 289 -------GKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS- 339
+ Q+L L + +R F S+ Y+ A GD+ +AVG+S D+ A R
Sbjct: 202 DPNSPSPDDLQKAQDLYLKIRPNIRKFHSSEYINALANGDICMAVGYSGDIFQARDRAEK 261
Query: 340 -----NVAVVVPKSGASLWADLWAIPAASR 364
+ +PK GA +W D AIPA ++
Sbjct: 262 AKQGVEIGYSIPKEGALIWFDQMAIPADAK 291
>gi|443700412|gb|ELT99374.1| hypothetical protein CAPTEDRAFT_95386, partial [Capitella teleta]
Length = 329
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 75/163 (46%), Gaps = 29/163 (17%)
Query: 230 RGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNSPR 282
G + PY WGT IGY K+ + AP++ W PE + ++ +++P
Sbjct: 85 EGNTYGIPYLWGTTGIGYNKAAVEKVLGKDAPVDSWALILEPENMKKLQKCGVAFLDAPS 144
Query: 283 EVI---------------VAGGKIAVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGW 327
EV+ + K AV++ + +A + ++S L GD+ VA+GW
Sbjct: 145 EVLPSVMTYLGIPGDSLKMGDYKKAVER-MKAVAPYITYYNSVRSLSDLANGDICVALGW 203
Query: 328 SSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
S D++ A R ++ VVPK GA +W D+ AIP S+
Sbjct: 204 SGDMMMARDRAKEANNGLDIRYVVPKEGAPMWFDMLAIPKDSK 246
>gi|398879044|ref|ZP_10634147.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM67]
gi|398197590|gb|EJM84567.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM67]
Length = 362
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 74/180 (41%), Gaps = 32/180 (17%)
Query: 208 FKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIGYKKSKF-QNHNLAPIEDWKDP 266
FK L K L ND G + PY WGT IGY K Q + I+ W
Sbjct: 103 FKNLDPKLLALLEKNDPGNEH------SVPYLWGTNGIGYNVDKVKQVLGIDRIDSWAVL 156
Query: 267 WWPELAGR-----ISMVNSPREVIVA--------------GGKIAVQQNLALLANQVRLF 307
+ PE + +SM++S EV A + L + + F
Sbjct: 157 FEPENIKKLSQCGVSMMDSADEVFPAILNYMGMDPRSENPEDYKKAEAKLLSIRPYITYF 216
Query: 308 DSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPA 361
S+ Y+ GD+ VA G+S DV A R N+A +PK G++LW DL AIPA
Sbjct: 217 HSSKYVSDLANGDICVAFGYSGDVFQAANRAKEAKNGVNIAYAIPKEGSNLWFDLLAIPA 276
>gi|163939195|ref|YP_001644079.1| extracellular solute-binding protein [Bacillus weihenstephanensis
KBAB4]
gi|229010675|ref|ZP_04167875.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus mycoides
DSM 2048]
gi|229057017|ref|ZP_04196411.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
AH603]
gi|229166221|ref|ZP_04293981.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
AH621]
gi|423486501|ref|ZP_17463183.1| hypothetical protein IEU_01124 [Bacillus cereus BtB2-4]
gi|423492225|ref|ZP_17468869.1| hypothetical protein IEW_01123 [Bacillus cereus CER057]
gi|423500984|ref|ZP_17477601.1| hypothetical protein IEY_04211 [Bacillus cereus CER074]
gi|423516040|ref|ZP_17492521.1| hypothetical protein IG7_01110 [Bacillus cereus HuA2-4]
gi|423594690|ref|ZP_17570721.1| hypothetical protein IIG_03558 [Bacillus cereus VD048]
gi|423601276|ref|ZP_17577276.1| hypothetical protein III_04078 [Bacillus cereus VD078]
gi|423663736|ref|ZP_17638905.1| hypothetical protein IKM_04133 [Bacillus cereus VDM022]
gi|423667066|ref|ZP_17642095.1| hypothetical protein IKO_00763 [Bacillus cereus VDM034]
gi|423676900|ref|ZP_17651839.1| hypothetical protein IKS_04443 [Bacillus cereus VDM062]
gi|163861392|gb|ABY42451.1| extracellular solute-binding protein family 1 [Bacillus
weihenstephanensis KBAB4]
gi|228617319|gb|EEK74384.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
AH621]
gi|228720294|gb|EEL71870.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
AH603]
gi|228750640|gb|EEM00466.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus mycoides
DSM 2048]
gi|401154308|gb|EJQ61726.1| hypothetical protein IEY_04211 [Bacillus cereus CER074]
gi|401156509|gb|EJQ63913.1| hypothetical protein IEW_01123 [Bacillus cereus CER057]
gi|401165883|gb|EJQ73193.1| hypothetical protein IG7_01110 [Bacillus cereus HuA2-4]
gi|401223642|gb|EJR30210.1| hypothetical protein IIG_03558 [Bacillus cereus VD048]
gi|401230703|gb|EJR37209.1| hypothetical protein III_04078 [Bacillus cereus VD078]
gi|401295636|gb|EJS01260.1| hypothetical protein IKM_04133 [Bacillus cereus VDM022]
gi|401304510|gb|EJS10062.1| hypothetical protein IKO_00763 [Bacillus cereus VDM034]
gi|401307161|gb|EJS12618.1| hypothetical protein IKS_04443 [Bacillus cereus VDM062]
gi|402439282|gb|EJV71289.1| hypothetical protein IEU_01124 [Bacillus cereus BtB2-4]
Length = 349
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 63/152 (41%), Gaps = 19/152 (12%)
Query: 227 IDPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVIV 286
DP K ++ Y WG I Y K + P W D W + G ++++N REV+
Sbjct: 120 FDPENK-YSLVYTWGVTGIAYNKKYVKE---TPTS-WNDLWNEKYKGHVTLLNDSREVLG 174
Query: 287 AGGKI--------------AVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVL 332
G K +L L + FD+ + + F D W+ WS D
Sbjct: 175 MGLKKNGFSNSTKEDAQLKTASADLQKLLPNLLAFDTDNIKQKFITEDAWIGTVWSGDAA 234
Query: 333 PAVKRMSNVAVVVPKSGASLWADLWAIPAASR 364
K +V VVPK G ++WAD AIP ++
Sbjct: 235 FIAKDNKDVGYVVPKEGGTIWADTLAIPKGAK 266
>gi|322833214|ref|YP_004213241.1| extracellular solute-binding protein [Rahnella sp. Y9602]
gi|384258392|ref|YP_005402326.1| putrescine ABC transporter periplasmic-binding protein [Rahnella
aquatilis HX2]
gi|321168415|gb|ADW74114.1| extracellular solute-binding protein family 1 [Rahnella sp. Y9602]
gi|380754368|gb|AFE58759.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Rahnella aquatilis HX2]
Length = 369
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 74/165 (44%), Gaps = 29/165 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP G +A PY W T IGY K + AP++ W PE + +S +++
Sbjct: 123 DP-GNKYAIPYLWATTGIGYNVDKVKAVLGKDAPVDSWDLVLKPENLEKLKSCGVSFLDA 181
Query: 281 PREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAV 325
P E+ A +L L L +R F S+ Y+ GD+ VA+
Sbjct: 182 PAEIYATVLNYLHLDPNSTKASDYTGAANDLLLKLRPNIRYFHSSQYINDLANGDICVAI 241
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
GW+ DV+ A R NVA +PK GA + D++AIPA ++
Sbjct: 242 GWAGDVMQAGNRAKEAKNGVNVAYSIPKEGALAFFDVFAIPADAK 286
>gi|229132181|ref|ZP_04261039.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
BDRD-ST196]
gi|228651328|gb|EEL07305.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
BDRD-ST196]
Length = 349
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 63/152 (41%), Gaps = 19/152 (12%)
Query: 227 IDPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVIV 286
DP K ++ Y WG I Y K + P W D W + G ++++N REV+
Sbjct: 120 FDPENK-YSLVYTWGVTGIAYNKKYVKE---TPTS-WNDLWNEKYKGHVTLLNDSREVLG 174
Query: 287 AGGKI--------------AVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVL 332
G K +L L + FD+ + + F D W+ WS D
Sbjct: 175 MGLKKNGFSNSTKEDAQLKTASADLQKLLPNLLAFDTDNIKQKFITEDAWIGTVWSGDAA 234
Query: 333 PAVKRMSNVAVVVPKSGASLWADLWAIPAASR 364
K +V VVPK G ++WAD AIP ++
Sbjct: 235 FIAKDNKDVGYVVPKEGGTIWADTLAIPKGAK 266
>gi|440682704|ref|YP_007157499.1| extracellular solute-binding protein family 1 [Anabaena cylindrica
PCC 7122]
gi|428679823|gb|AFZ58589.1| extracellular solute-binding protein family 1 [Anabaena cylindrica
PCC 7122]
Length = 363
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 79/179 (44%), Gaps = 33/179 (18%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPE--LAGRISMVNSPREVI 285
DP + ++ P+ WGT + Y K +N P EDW+ W + L R++++N REV+
Sbjct: 136 DPNNR-YSIPFNWGTTGLLYNSEKLEN----PPEDWEYLWQNQDKLYKRMTLLNDVREVM 190
Query: 286 VAGGKI--------------AVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDV 331
A K+ + L +L + FD+ + GD+ +A+ +S+D
Sbjct: 191 GAALKMLGYSYNSQNETEVKQAYEKLKILKPAIAAFDTDAWQNQLLAGDLLLAMCYSTDA 250
Query: 332 LPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGQVRGPSPLIHQWIEFCLQ 390
+ K V+P+SG+SLW D IP +I + G + WI LQ
Sbjct: 251 VNISKENPKFKYVIPRSGSSLWTDTIVIP--------KIAANLAGA----YAWINLILQ 297
>gi|23502475|ref|NP_698602.1| spermidine/putrescine ABC transporter periplasmic
spermidine/putrescine-binding protein [Brucella suis
1330]
gi|161619552|ref|YP_001593439.1| hypothetical protein BCAN_A1649 [Brucella canis ATCC 23365]
gi|261755552|ref|ZP_05999261.1| extracellular solute-binding protein family 1 [Brucella suis bv. 3
str. 686]
gi|376275777|ref|YP_005116216.1| extracellular solute-binding protein [Brucella canis HSK A52141]
gi|376281267|ref|YP_005155273.1| spermidine/putrescine ABC transporter periplasmic
spermidine/putrescine-binding protein [Brucella suis
VBI22]
gi|384225261|ref|YP_005616425.1| spermidine/putrescine ABC transporter periplasmic
spermidine/putrescine-binding protein [Brucella suis
1330]
gi|23348468|gb|AAN30517.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein, putative
[Brucella suis 1330]
gi|161336363|gb|ABX62668.1| Hypothetical protein BCAN_A1649 [Brucella canis ATCC 23365]
gi|261745305|gb|EEY33231.1| extracellular solute-binding protein family 1 [Brucella suis bv. 3
str. 686]
gi|343383441|gb|AEM18933.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein, putative
[Brucella suis 1330]
gi|358258866|gb|AEU06601.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein, putative
[Brucella suis VBI22]
gi|363404343|gb|AEW14638.1| extracellular solute-binding protein family 1 [Brucella canis HSK
A52141]
Length = 367
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 113/270 (41%), Gaps = 42/270 (15%)
Query: 131 TYALTVPLRVVSLQN---SVPQSWVKDFMRSQGKRLKFQMNLCASI-------DGIVNNL 180
T++ RVV++ N + S +KDF + G ++ + + I G +L
Sbjct: 21 TFSAGAQERVVNIYNWSDYIDDSILKDFTKETGIKVVYDVYDSNEILETKLLAGGSGYDL 80
Query: 181 STPFNKLSFAIKKRFIEPIAEAEDQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRW 240
P + + ++ + D+D L + W S A DP G ++A Y W
Sbjct: 81 VVPSGEF---LGRQIPAGVFLKLDKDKLPNLKNMWDEI--STRAATYDP-GNEYSANYMW 134
Query: 241 GTMAIGYKKSKFQNH-NLAPIEDWKDPWWPELAGR-----ISMVNSPREVIVAG------ 288
GT IGY K+K + I+ W + PE + I +++S E++
Sbjct: 135 GTTGIGYNKAKIKEALGTDTIDSWDVLFDPEKTAKLKDCGIYLLDSASEMLRPALNYLGL 194
Query: 289 -------GKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS- 339
+ Q+L L + +R F S+ Y+ A GD+ +AVG+S D+ A R
Sbjct: 195 DPNSPSPDDLQKAQDLYLKIRPNIRKFHSSEYINALANGDICMAVGYSGDIFQARDRAEK 254
Query: 340 -----NVAVVVPKSGASLWADLWAIPAASR 364
+ +PK GA +W D AIPA ++
Sbjct: 255 AKQGVEIGYSIPKEGALIWFDQMAIPADAK 284
>gi|260432277|ref|ZP_05786248.1| putrescine-binding periplasmic protein [Silicibacter
lacuscaerulensis ITI-1157]
gi|260416105|gb|EEX09364.1| putrescine-binding periplasmic protein [Silicibacter
lacuscaerulensis ITI-1157]
Length = 361
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 81/184 (44%), Gaps = 30/184 (16%)
Query: 204 DQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIE 261
D+ L++ W V + DP G ++ Y WGT IG K Q API+
Sbjct: 94 DKSKLPNLANMWDVIEERT--AQYDP-GNEYSINYMWGTTGIGVNVGKVQEALGEDAPID 150
Query: 262 DWKDPWWPE----LAG-RISMVNSPREVIVAGGK-------------IAVQQNLALLAN- 302
W + PE LAG + +++P E+I A K IA + + +
Sbjct: 151 SWDLVFNPENMEKLAGCGVHFLDAPAEMIPAALKYIGEDPDSHDPDVIAKAEGVFMAVRP 210
Query: 303 QVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADL 356
++ F S+ Y+ A GD+ VAVGWS DVL A R +A PK GA +W D
Sbjct: 211 YIQKFHSSEYINALANGDICVAVGWSGDVLQARDRADEADNGVTIAYHAPKEGAQMWFDQ 270
Query: 357 WAIP 360
AIP
Sbjct: 271 MAIP 274
>gi|152974814|ref|YP_001374331.1| extracellular solute-binding protein [Bacillus cytotoxicus NVH
391-98]
gi|152023566|gb|ABS21336.1| extracellular solute-binding protein family 1 [Bacillus cytotoxicus
NVH 391-98]
Length = 350
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 65/153 (42%), Gaps = 21/153 (13%)
Query: 227 IDPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVIV 286
DP K ++ Y WG I Y K + P W D W + GR++++N REV+
Sbjct: 121 FDPENK-YSLVYTWGVTGIAYNKKYVKE---TPTS-WNDLWNEKYKGRVTLLNDSREVLG 175
Query: 287 ---------------AGGKIAVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDV 331
A K A LL N + FD+ + + F D W+ WS D
Sbjct: 176 MALKKNGFSNSTKDDAQLKTAATDLQKLLPN-LLAFDTDNIKQKFITEDTWIGTVWSGDA 234
Query: 332 LPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 364
K +V VVPK G ++WAD AIP ++
Sbjct: 235 AFIAKDNKDVGYVVPKEGGTIWADTLAIPKGAK 267
>gi|452750133|ref|ZP_21949885.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas stutzeri NF13]
gi|452005783|gb|EMD98063.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas stutzeri NF13]
Length = 361
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 73/159 (45%), Gaps = 27/159 (16%)
Query: 235 AAPYRWGTMAIGYKKSKFQNH-NLAPIEDWKDPWWPELAGR-----ISMVNSPREVI--- 285
AAPY WGT IGY K + + I+ W + PE A + I+ ++S E+I
Sbjct: 123 AAPYLWGTNGIGYNVEKVKAALGVDRIDSWAVIFEPENAEKLASCGIAFLDSADEMIPAM 182
Query: 286 -----------VAGGKIAVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPA 334
A ++ L + VR F S+ Y+ G++ VA G+S DV A
Sbjct: 183 LNYLGLDPNSENAADYQKAEEKLLAVRPHVRYFHSSKYISDLANGNICVAAGFSGDVFQA 242
Query: 335 VKRMSN------VAVVVPKSGASLWADLWAIPA-ASRLE 366
R +A +PK GA+LW D+ AIPA AS +E
Sbjct: 243 AARAEEAGKGVEIAYAIPKEGANLWFDMLAIPADASNVE 281
>gi|374703156|ref|ZP_09710026.1| extracellular solute-binding protein [Pseudomonas sp. S9]
Length = 365
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 86/207 (41%), Gaps = 46/207 (22%)
Query: 226 EIDPRGKIWAAPYRWGTMAIGYKKSKFQN-HNLAPIEDWKDPWWPE-----LAGRISMVN 279
E + G ++A PY WGT IGY K + + I+ W + PE +S ++
Sbjct: 118 ETNDPGNMYAVPYLWGTNGIGYNVEKVKEVLGVDHIDSWAVLFEPENMKNLTTCGVSFLD 177
Query: 280 SPREVIVA--------------GGKIAVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAV 325
S E+I A ++ L + V F S+ ++ G++ VA
Sbjct: 178 SADEMIPAVLNYMGLDPNSKNPDDYKKAEEKLLAVRPYVTYFHSSKFISDLANGNICVAA 237
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASRLETKQIGGQVRGPSP 379
G+S DVL A R ++A +PK G +LW D+ AIPA S+ KQ
Sbjct: 238 GFSGDVLQAADRAEEAGKGIDIAYAIPKEGGNLWFDMMAIPADSK-NVKQ---------- 286
Query: 380 LIHQWIEFCLQTARALPFKQEVIPGAS 406
H +I + LQ EVI G S
Sbjct: 287 -AHAFINYLLQP--------EVIAGVS 304
>gi|423524813|ref|ZP_17501286.1| hypothetical protein IGC_04196 [Bacillus cereus HuA4-10]
gi|401169039|gb|EJQ76286.1| hypothetical protein IGC_04196 [Bacillus cereus HuA4-10]
Length = 349
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 63/152 (41%), Gaps = 19/152 (12%)
Query: 227 IDPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVIV 286
DP K ++ Y WG I Y K + P W D W + G ++++N REV+
Sbjct: 120 FDPENK-YSLVYTWGVTGIAYNKKYVKE---VPTS-WADLWNDKYKGHVTLLNDSREVLG 174
Query: 287 AGGKI--------------AVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVL 332
G K +L L + FD+ + + F D W+ WS D
Sbjct: 175 MGLKKNGFSNSTKEDAQLKTASNDLQKLLPNLLAFDTDNIKQKFITEDAWIGTVWSGDAA 234
Query: 333 PAVKRMSNVAVVVPKSGASLWADLWAIPAASR 364
K +V VVPK G ++WAD AIP ++
Sbjct: 235 FIAKDNKDVGYVVPKEGGTIWADTLAIPKGAK 266
>gi|398944508|ref|ZP_10671287.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM41(2012)]
gi|398158081|gb|EJM46442.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM41(2012)]
Length = 362
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 76/180 (42%), Gaps = 32/180 (17%)
Query: 208 FKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIGYKKSKF-QNHNLAPIEDWKDP 266
FK L K L ND G + PY WGT IGY K Q + I+ W
Sbjct: 103 FKNLDPKLLALLEKNDPGNEH------SVPYLWGTNGIGYNVDKVKQVLGIDRIDSWAVF 156
Query: 267 WWPELAGR-----ISMVNSPREVIVA----GGKIAVQQN----------LALLANQVRLF 307
+ PE + +SM++S EV A G +N L + + F
Sbjct: 157 FEPENLKKLSQCGVSMMDSADEVFPAVLNYMGMDPRSENPEDFKKAEAKLLTIRPYITYF 216
Query: 308 DSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPA 361
S+ Y+ GD+ VA G+S DV A R N+A +PK G++LW DL A+PA
Sbjct: 217 HSSKYVSDLANGDICVAFGYSGDVFQAANRAKEAKNGVNIAYAIPKEGSNLWFDLLAVPA 276
>gi|444312665|ref|ZP_21148242.1| extracellular solute-binding protein [Ochrobactrum intermedium M86]
gi|443483958|gb|ELT46783.1| extracellular solute-binding protein [Ochrobactrum intermedium M86]
Length = 367
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 114/270 (42%), Gaps = 42/270 (15%)
Query: 131 TYALTVPLRVVSLQN---SVPQSWVKDFMRSQGKRLKFQMNLCASI-------DGIVNNL 180
T++ + RVV++ N + S +KDF + G ++ + + I G +L
Sbjct: 21 TFSASAQERVVNIYNWSDYIDDSILKDFTKETGIKVVYDVYDSNEILETKLLAGGSGYDL 80
Query: 181 STPFNKLSFAIKKRFIEPIAEAEDQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRW 240
P + + ++ + D+D L + W S A DP G ++ Y W
Sbjct: 81 VVPSGEF---LGRQIPAGVFLKLDKDKLPNLKNMWDEI--STRAATYDP-GNEYSVNYMW 134
Query: 241 GTMAIGYKKSKFQNH-NLAPIEDWKDPWWPELAGR-----ISMVNSPREVIVAG------ 288
GT IGY K+K + I+ W + PE + + I +++S E++
Sbjct: 135 GTTGIGYNKAKIKEALGTDTIDSWAVLFDPEQSAKLKDCGIYLLDSASEMLRPALNYLGL 194
Query: 289 -------GKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS- 339
+ Q+L L + +R F S+ Y+ A GD+ +AVG+S D+ A R
Sbjct: 195 DPNSPSPDDLQKAQDLYLKIRPNIRKFHSSEYINALANGDICMAVGYSGDIFQARDRAEK 254
Query: 340 -----NVAVVVPKSGASLWADLWAIPAASR 364
+ +PK GA +W D AIPA ++
Sbjct: 255 AKQGVEIGYSIPKEGALMWFDQMAIPADAK 284
>gi|238753457|ref|ZP_04614820.1| Putrescine-binding periplasmic protein [Yersinia ruckeri ATCC
29473]
gi|238708410|gb|EEQ00765.1| Putrescine-binding periplasmic protein [Yersinia ruckeri ATCC
29473]
Length = 369
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 74/165 (44%), Gaps = 29/165 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGY--KKSKFQNHNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP+ + +A PY W T IGY +K K API W PE + +S +++
Sbjct: 123 DPQNQ-YAIPYLWATTGIGYNVEKVKAALGTDAPINSWDLVLKPENLEKLKSCGVSFLDA 181
Query: 281 PREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAV 325
P E+ AG L L L +R F S+ Y+ GD+ VAV
Sbjct: 182 PSEIFATVLNYQGKDPNSSNAGDYTGSATELLLKLRPNIRYFHSSQYINDLANGDICVAV 241
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
GW+ DV+ A R NVA +PK GA + D++A+P ++
Sbjct: 242 GWAGDVMQASNRAKEAKNGVNVAYSIPKEGALAFFDVFAMPTDAK 286
>gi|119719819|ref|YP_920314.1| extracellular solute-binding protein [Thermofilum pendens Hrk 5]
gi|119524939|gb|ABL78311.1| extracellular solute-binding protein, family 1 [Thermofilum pendens
Hrk 5]
Length = 360
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 100/243 (41%), Gaps = 50/243 (20%)
Query: 190 AIKKRFIEPIAEAEDQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIGYKK 249
A+KK + + D+ L + +V+ +N DP G +A PY WGT IG +
Sbjct: 96 AVKKGLVAQL----DKTRIPNLGNVDRVFFENN----FDP-GLRYAVPYAWGTTGIGVNR 146
Query: 250 SKFQNHNLAPIEDWKDP--WWPELAGRISMVNSPREVIVAG-----------GKIAVQQN 296
+ E D + P G++SM+ EV+ A + + Q+
Sbjct: 147 DYVAEGEIEGYEQLFDTKVFLPRHKGKVSMLEEFLEVVNAAKLYLGIPLNDWSEESKQRI 206
Query: 297 LALLANQ----VRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASL 352
+ LL Q + ++ Y+ A GD+ A WS DV+ A +V V+PK GA +
Sbjct: 207 IELLREQRDFLAGYYGASVYIPALAKGDLHAAHAWSGDVVQAQSENKSVEYVLPKEGAFV 266
Query: 353 WADLWAIPAASRLETKQIGGQVRGPSP-LIHQWIEFCLQTARAL----------PFKQEV 401
W D IP +R SP L ++WI F L A A P K+E+
Sbjct: 267 WIDFMVIPVNAR-------------SPDLAYEWINFLLDPAVAAKNSSYTYYPSPVKREL 313
Query: 402 IPG 404
+ G
Sbjct: 314 LEG 316
>gi|359395656|ref|ZP_09188708.1| Putrescine-binding periplasmic protein [Halomonas boliviensis LC1]
gi|357969921|gb|EHJ92368.1| Putrescine-binding periplasmic protein [Halomonas boliviensis LC1]
Length = 367
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 84/188 (44%), Gaps = 45/188 (23%)
Query: 208 FKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKD 265
F L+ + L + DAG ++ PY WGT IGY + + + AP++ W
Sbjct: 105 FDNLNPELMTRLETIDAG------SEYSVPYMWGTNGIGYNVDRVKEILGDDAPVDSWAL 158
Query: 266 PWWPELAGRIS-------MVNSPREVIV-------------------AGGKIAVQQNLAL 299
+ PE+ +S M++S E++ AGG++ +A
Sbjct: 159 LFDPEITAALSEAGCGLSMLDSGDEMLSPAMAYLGLDPLSENIDDLEAGGEL-----IAG 213
Query: 300 LANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLW 353
+ + + F S+ Y+ GD+ V+ G+S D+ A +R ++ +PK GA+LW
Sbjct: 214 VRDNMTYFHSSRYVSDLANGDICVSAGYSGDIFQAAERAEEAGRDFSIGYSIPKEGAALW 273
Query: 354 ADLWAIPA 361
D+ A+PA
Sbjct: 274 FDMMAVPA 281
>gi|423588228|ref|ZP_17564315.1| hypothetical protein IIE_03640 [Bacillus cereus VD045]
gi|401226736|gb|EJR33270.1| hypothetical protein IIE_03640 [Bacillus cereus VD045]
Length = 349
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 63/152 (41%), Gaps = 19/152 (12%)
Query: 227 IDPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVIV 286
DP K ++ Y WG I Y K + AP W D W + G ++++N REV+
Sbjct: 120 FDPENK-YSLVYTWGVTGIAYNKKYVKE---APTS-WADLWNEKYKGHVTLLNDSREVLG 174
Query: 287 AGGKI--------------AVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVL 332
G K +L L + FD+ + + F D W+ WS D
Sbjct: 175 VGLKKHGFSNSTKDDAQLKTAADDLKKLLPNLLAFDTDNIKQKFITEDAWIGTVWSGDAA 234
Query: 333 PAVKRMSNVAVVVPKSGASLWADLWAIPAASR 364
K +V VVPK G ++W D AIP ++
Sbjct: 235 FIAKDNKDVEYVVPKEGGTIWTDTLAIPKGAK 266
>gi|300022947|ref|YP_003755558.1| family 1 extracellular solute-binding protein [Hyphomicrobium
denitrificans ATCC 51888]
gi|299524768|gb|ADJ23237.1| extracellular solute-binding protein family 1 [Hyphomicrobium
denitrificans ATCC 51888]
Length = 370
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 75/163 (46%), Gaps = 27/163 (16%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQNHNL-APIEDWKDPWWPELAGR-----ISMVNSP 281
DP G +A Y WGT IGY K + AP++ W + PE+ + + M+++P
Sbjct: 126 DP-GNDYAINYMWGTTGIGYNIGKVKERMADAPVDSWDLIFKPEILAKFKDCGVMMLDAP 184
Query: 282 REVIVAG----------GKIAVQQNLALLANQVR----LFDSTHYLKAFGIGDVWVAVGW 327
+++ A K + L +VR F S+ Y+ A GD+ +AVG+
Sbjct: 185 DDILPAALNYLGLDPNSSKPEDIEKAGALMEKVRPFVQKFHSSEYINALANGDICIAVGY 244
Query: 328 SSDVLPA------VKRMSNVAVVVPKSGASLWADLWAIPAASR 364
S D+L A K + +PK GA +W D AIPA ++
Sbjct: 245 SGDILQARTRAQEAKNGQEIGYSLPKQGAQMWFDEMAIPADAK 287
>gi|258646316|ref|ZP_05733785.1| spermidine/putrescine-binding periplasmic protein PotD [Dialister
invisus DSM 15470]
gi|260403707|gb|EEW97254.1| spermidine/putrescine-binding periplasmic protein PotD [Dialister
invisus DSM 15470]
Length = 353
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 67/156 (42%), Gaps = 29/156 (18%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIED----WKDPWWPELAGRISMVNSPRE 283
DP G ++ Y WG I Y N I+D W D W E GR+ ++N RE
Sbjct: 126 DPSGD-YSVVYTWGVTGIAY--------NTKYIKDTPSSWNDLWKDEYKGRVILLNDNRE 176
Query: 284 VIVAGGKI---------------AVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWS 328
VI G K AV Q L L + FD+ + F + W+ WS
Sbjct: 177 VIGMGLKKNGHSVNSKDPNEVTQAVDQ-LRKLTPNLLAFDTDTIKQKFIAEEAWIGTMWS 235
Query: 329 SDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 364
D K ++A ++PK GA +WAD +AIP ++
Sbjct: 236 GDASFTHKDNPDIAFIIPKEGAVIWADTFAIPKGAK 271
>gi|354566674|ref|ZP_08985845.1| extracellular solute-binding protein family 1 [Fischerella sp.
JSC-11]
gi|353544333|gb|EHC13787.1| extracellular solute-binding protein family 1 [Fischerella sp.
JSC-11]
Length = 361
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 86/201 (42%), Gaps = 34/201 (16%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWW--PELAGRISMVNSPREVI 285
DP + ++ P+ WGT + Y +N P EDW+ W +L +I+++N REV+
Sbjct: 133 DPNNR-YSLPFNWGTTGLIYNSEILKN----PPEDWEYLWQNQQQLNNKITLLNDVREVM 187
Query: 286 VAGGKI--------------AVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDV 331
A K+ + L L + FD+ + GD+ +++ +SSD
Sbjct: 188 GAVLKMLGYSYNSKNETEVKQAYEKLQALKGAIAAFDTDAWRNQIVAGDLLLSMCYSSDA 247
Query: 332 LPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGQVRGPSPLIHQWIEFCLQT 391
+ + VVPKSG+SLW D IP +R I G + WI F Q
Sbjct: 248 VKITQENPKFKYVVPKSGSSLWTDTVVIPTTAR----NIDGA--------YAWINFIFQP 295
Query: 392 ARALPFKQEV-IPGASPSALE 411
A Q + + +S +A E
Sbjct: 296 EVAAQISQRLWVTTSSRAAFE 316
>gi|398838150|ref|ZP_10595432.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM102]
gi|398116712|gb|EJM06470.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM102]
Length = 365
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 87/327 (26%), Positives = 139/327 (42%), Gaps = 54/327 (16%)
Query: 138 LRVVSLQNSVPQSWVKDFMRSQGKRLKF---------QMNLCASIDGIVNNLSTPFNK-L 187
LRV + + + VK F G R+ + + L A G ++ P N L
Sbjct: 28 LRVYNWSDYIAPDTVKKFEDETGIRVTYDVFDSNETLEARLLAGKSGY--DIVVPSNSFL 85
Query: 188 SFAIKKRFIEPIAEAEDQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIGY 247
+ IK +P+ +++ +W K L+ V L++ A + D A PY WG++ IGY
Sbjct: 86 AKQIKAGVYQPLDKSKLPNW-KNLN---PVLLKNASASDPD---NGHAFPYMWGSIGIGY 138
Query: 248 KKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNSPREVIVAG----GKIAVQQN 296
+K + AP+ W + PE A + IS ++SP E++ A G Q+
Sbjct: 139 NPAKVKEVLGTNAPVNSWDLLFKPENAAKLKACGISFLDSPTEMLPAALHYLGYPVNSQD 198
Query: 297 LALLAN----------QVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSN------ 340
A +A V F S+ Y+ G++ VAVG+S DVL A R
Sbjct: 199 KAQIAEAEALFMKIRPSVAYFHSSKYISDLANGNICVAVGYSGDVLQAKARAKEAGDKVK 258
Query: 341 VAVVVPKSGASLWADLWAIP--AASRLETKQIGGQVRGPSPL--IHQWIEFCLQTARALP 396
+ +PK GA + D+ AIP AA+ + P + + + + A A P
Sbjct: 259 IEYSIPKEGAGSFYDMVAIPRDAANVDNAYLFMNFLMRPDIIAEVTNSVGYSNANAAATP 318
Query: 397 FKQEVI---PGAS-PSALESTLVKLPE 419
E I PG+ P A+ +TL +P+
Sbjct: 319 LVDEAIRDDPGSYPPQAVMATLYAIPD 345
>gi|398350258|ref|YP_006395722.1| putrescine-binding periplasmic protein PotF [Sinorhizobium fredii
USDA 257]
gi|390125584|gb|AFL48965.1| putrescine-binding periplasmic protein PotF [Sinorhizobium fredii
USDA 257]
Length = 364
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 115/262 (43%), Gaps = 48/262 (18%)
Query: 139 RVVSLQN---SVPQSWVKDFMRSQGKRLKF---------QMNLCASIDGIVNNLSTPFNK 186
RVV++ N + S + DF + G ++ + + L A G ++ P
Sbjct: 26 RVVNVYNWSDYIDDSILADFTKETGIKVVYDVFDSNEILETKLLAGGSGY--DVVVP--- 80
Query: 187 LSFAIKKRFIEPIAEAEDQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIG 246
++ ++++ + + D+ LS+ W V + + DP G +A Y WGT IG
Sbjct: 81 TAYFLQRQIAAGVFQKLDKSKLPNLSNMWNVIMERT--AQYDP-GNEYAVDYMWGTTGIG 137
Query: 247 YKKSKFQNHNLAPIE--DWKDPWWPELAGR-----ISMVNSPREVI-VAGGKIAV----- 293
Y K + L E +W + PE+A + I +++SP ++I A + +
Sbjct: 138 YNVEKMK-EILGSDEKPNWDVVFNPEIAAKFKDCGIHLLDSPTDIIPSALAYLGLNPDSH 196
Query: 294 -QQNLALLAN-------QVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------ 339
Q +L A +R F S+ Y+ A GD+ +AVG+S D+ A R +
Sbjct: 197 EQADLDKAAELLLKVRPYIRKFHSSEYINALANGDICLAVGFSGDIFQARDRAAEAKSGV 256
Query: 340 NVAVVVPKSGASLWADLWAIPA 361
V +P GA +W D+ AIPA
Sbjct: 257 TVDYSIPAQGAQMWFDMLAIPA 278
>gi|227499864|ref|ZP_03929957.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Anaerococcus tetradius
ATCC 35098]
gi|227217973|gb|EEI83246.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Anaerococcus tetradius
ATCC 35098]
Length = 362
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 96/231 (41%), Gaps = 51/231 (22%)
Query: 204 DQDWFKRLSHKWKVYLRSNDAGEI----DPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAP 259
DQ K+L HK V L + D + DP + ++ PY WG+ I Y K++ + +
Sbjct: 99 DQGLLKKLDHKKIVGLDNIDKRFLNLAYDPENE-YSIPYLWGSFGIIYNTKKYKAEDFSS 157
Query: 260 IEDWKDPWWPELAGRISMVNSPREVI---------------------VAGGKIAVQQNL- 297
WK+ W P+ G I + RE + V+ + N+
Sbjct: 158 ---WKNLWDPKFKGEILSFDGARETLGIGLLADNLSLNTCDKDKLVRVSNELVGYMANVR 214
Query: 298 ALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLW 357
A+LA+++R++ +G+ V + +S D A+ ++A +PK G+++W D
Sbjct: 215 AILADEIRMY--------MALGEANVGITFSGDAASAIDSNPDLAYAIPKEGSNIWFDSM 266
Query: 358 AIPAASRLETKQIGGQVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPS 408
IP S+ + + +I F L+ A E I A+P+
Sbjct: 267 VIPKTSK------------NTEAAYAFINFMLRAENAAQ-NAEYISYATPN 304
>gi|145297278|ref|YP_001140119.1| ABC-type putrescine transporter periplasmic binding protein
[Aeromonas salmonicida subsp. salmonicida A449]
gi|142850050|gb|ABO88371.1| ABC-type putrescine transporter, periplasmic binding protein
[Aeromonas salmonicida subsp. salmonicida A449]
Length = 361
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 74/167 (44%), Gaps = 37/167 (22%)
Query: 226 EIDPRGKIWAAPYRWGTMAIGYKKSKFQN-HNLAPIEDWKDPWWPELAGRIS-----MVN 279
++DP G +A PY WGT IGY K ++ + I+ W + PE ++S ++
Sbjct: 115 KVDP-GHQYAVPYLWGTNGIGYNVDKIKDVLGVDKIDSWAVIFEPENMQKLSRCGVAFLD 173
Query: 280 SPREVIVAGGKIAVQQNLALLANQ-------------------VRLFDSTHYLKAFGIGD 320
S E+I A V L L N V F S+ Y+ GD
Sbjct: 174 SADEMIPA-----VLNYLGLDPNSHKPEDIKRAEEQLLKVRPYVTYFHSSKYIGDLANGD 228
Query: 321 VWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPA 361
+ VA G+S D+L A R N+A +PK G +LW D+ AIPA
Sbjct: 229 ICVAAGFSGDILQAAARADEAGKGINIAYSIPKEGGNLWFDMMAIPA 275
>gi|395236033|ref|ZP_10414233.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Enterobacter sp. Ag1]
gi|394729339|gb|EJF29335.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Enterobacter sp. Ag1]
Length = 370
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 86/211 (40%), Gaps = 35/211 (16%)
Query: 234 WAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNSPREVIV 286
+ PY T IGY K + AP++ W + PE + +S +++P E+
Sbjct: 129 YGIPYMMVTTGIGYNVDKVKAVLGKDAPVDSWDLIFKPENLEKLKSCGVSFLDAPSEIYA 188
Query: 287 ---------------AGGKIAVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDV 331
A A L L +R F S+ Y+ GD+ VA+GWS D+
Sbjct: 189 TVLHYLGKDPNSTNAADYTGAANDLLMKLRPNIRYFHSSQYINDLANGDICVAIGWSGDI 248
Query: 332 LPAVKRMS------NVAVVVPKSGASLWADLWAIP--AASRLETKQIGGQVRGPSPL--I 381
L A R NVA +PK GA ++ D++A+P A ++ E Q + P + I
Sbjct: 249 LQAANRAKEAKNGVNVAYSIPKEGAMVYFDMFALPVDAKNKDEAYQFLNYLMKPDVIANI 308
Query: 382 HQWIEFCLQTARALPFKQEVI---PGASPSA 409
I + A P E + PG P A
Sbjct: 309 SNHIYYANANKEATPLLSEEVRSNPGIYPPA 339
>gi|70730318|ref|YP_260057.1| periplasmic putrescine-binding protein [Pseudomonas protegens Pf-5]
gi|68344617|gb|AAY92223.1| periplasmic putrescine-binding protein [Pseudomonas protegens Pf-5]
Length = 362
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 95/241 (39%), Gaps = 48/241 (19%)
Query: 209 KRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIGYKKSKF-QNHNLAPIEDWKDPW 267
K L K L ND G ++ PY WGT IGY K Q + I+ W
Sbjct: 104 KNLDPKLLALLEQNDPGNQ------YSVPYLWGTNGIGYNVDKVKQVLGIDHIDSWAVLL 157
Query: 268 WPELAGR-----ISMVNSPREVIVA--------------GGKIAVQQNLALLANQVRLFD 308
P + +SM++SP EV A + L L + F
Sbjct: 158 EPANLKKLQQCGVSMMDSPDEVFPAVLNYLGLDPRSENPEDYKKAEAKLLTLRPYITYFH 217
Query: 309 STHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAA 362
S+ Y+ GD+ +A G+S DV A R N+A +PK G++LW DL AIPA
Sbjct: 218 SSKYVSDLANGDICIAFGYSGDVFQAANRAREAKNGVNIAYSIPKEGSNLWFDLLAIPAD 277
Query: 363 SRLETKQIGGQVRGPSPLIHQWIEFCLQ---TARALPFKQEVIPG-ASPSALESTLVKLP 418
+ G V+ H +I + L A+ + P AS +E+ LV P
Sbjct: 278 A--------GNVKEA----HAFINYLLDPQVIAKVSAYVGYANPNPASQQYMEADLVNNP 325
Query: 419 E 419
E
Sbjct: 326 E 326
>gi|407976320|ref|ZP_11157220.1| extracellular solute-binding protein family 1 [Nitratireductor
indicus C115]
gi|407428218|gb|EKF40902.1| extracellular solute-binding protein family 1 [Nitratireductor
indicus C115]
Length = 365
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 110/262 (41%), Gaps = 48/262 (18%)
Query: 139 RVVSLQN---SVPQSWVKDFMRSQGKRLKFQMNLCASI-------DGIVNNLSTPFNKLS 188
RVV++ N + S ++DF + G ++ + + I G ++ P +
Sbjct: 27 RVVNVYNWSDYIDDSILEDFTKETGIKVVYDVYDSNEILETKLLAGGSGYDVVVPSGEF- 85
Query: 189 FAIKKRFIEPIAEAEDQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIGYK 248
+ ++ + + D+ LS+ W + S DP G ++ Y WGT +GY
Sbjct: 86 --LGRQINAGVFQKLDKSKLPNLSNMWN--MISERVAVYDP-GNEYSINYMWGTTGVGYN 140
Query: 249 KSKFQN-HNLAPIEDWKDPWWPELAGR-----ISMVNSPREVIVAGGKIAVQQNL----- 297
K + + I+ W + PELA + I M++S EVI A + Q L
Sbjct: 141 VGKAEEILGTSKIDTWDVLFKPELAAKFKDCGIHMLDSASEVIRAA---LIYQGLDPNTP 197
Query: 298 ---------ALLAN---QVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------ 339
ALL VR F S+ Y+ GDV +A+G+S D+ A R +
Sbjct: 198 SAEDLAKAEALLVAVRPYVRKFHSSEYINGLANGDVCLALGYSGDIFQARDRAAEADQGV 257
Query: 340 NVAVVVPKSGASLWADLWAIPA 361
V +PK GA LW D AIPA
Sbjct: 258 EVGYSIPKEGALLWFDQMAIPA 279
>gi|345887621|ref|ZP_08838790.1| hypothetical protein HMPREF0178_01564 [Bilophila sp. 4_1_30]
gi|345041620|gb|EGW45761.1| hypothetical protein HMPREF0178_01564 [Bilophila sp. 4_1_30]
Length = 345
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 100/230 (43%), Gaps = 31/230 (13%)
Query: 225 GEIDP--------RGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRIS 276
G +DP RG PY WGT+ + K +++ I+ WKD PE GR+
Sbjct: 105 GNLDPASLNQPFDRGNALTIPYMWGTVGLLVNKKAV---DVSTIKSWKDLARPEFKGRVL 161
Query: 277 MVNSPREVIVAGGKI--------------AVQQNLALLANQVRLFDSTHYLKAFGIGDVW 322
+ + R+ G K A + L L VR+FD T +AF +V
Sbjct: 162 LSDDLRDTFGVGLKACGYSINSTNPDEIKAAYEWLKALKPSVRVFDVTATKQAFISEEVV 221
Query: 323 VAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGQVRGPSPLIH 382
+ W+ D A++ ++ +VP+ G +W D +AIPA + E K+ + S L+
Sbjct: 222 AGLAWNGDAFIAMQENPDLEFIVPEEGMLIWLDNFAIPAGA--EHKE--NAYKFISYLMR 277
Query: 383 -QWIEFCLQTARALPFKQEVIPGASPSALESTLVKL-PEELLKGKPSVDT 430
+ + C++ + P ES ++ L PEEL KG+ +V+
Sbjct: 278 PEVAKLCVEEFNYSTPNKAAEKILEPEYAESKVIVLDPEELAKGEVTVNV 327
>gi|418362030|ref|ZP_12962674.1| ABC-type putrescine transporter, periplasmic binding protein
[Aeromonas salmonicida subsp. salmonicida 01-B526]
gi|356686665|gb|EHI51258.1| ABC-type putrescine transporter, periplasmic binding protein
[Aeromonas salmonicida subsp. salmonicida 01-B526]
Length = 353
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 74/167 (44%), Gaps = 37/167 (22%)
Query: 226 EIDPRGKIWAAPYRWGTMAIGYKKSKFQN-HNLAPIEDWKDPWWPELAGRIS-----MVN 279
++DP G +A PY WGT IGY K ++ + I+ W + PE ++S ++
Sbjct: 107 KVDP-GHQYAVPYLWGTNGIGYNVDKIKDVLGVDKIDSWAVIFEPENMQKLSRCGVAFLD 165
Query: 280 SPREVIVAGGKIAVQQNLALLANQ-------------------VRLFDSTHYLKAFGIGD 320
S E+I A V L L N V F S+ Y+ GD
Sbjct: 166 SADEMIPA-----VLNYLGLDPNSHKPEDIKRAEEQLLKVRPYVTYFHSSKYIGDLANGD 220
Query: 321 VWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPA 361
+ VA G+S D+L A R N+A +PK G +LW D+ AIPA
Sbjct: 221 ICVAAGFSGDILQAAARADEAGKGINIAYSIPKEGGNLWFDMMAIPA 267
>gi|317491403|ref|ZP_07949839.1| extracellular solute-binding protein [Enterobacteriaceae bacterium
9_2_54FAA]
gi|316920950|gb|EFV42273.1| extracellular solute-binding protein [Enterobacteriaceae bacterium
9_2_54FAA]
Length = 368
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 77/169 (45%), Gaps = 29/169 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGY--KKSKFQNHNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP K +A PY + T IGY +K K AP+ W PE + +S +++
Sbjct: 122 DPDNK-YAIPYTFATTGIGYNVEKVKAALGKDAPVNSWDLVLKPENLEKLKSCGVSFLDA 180
Query: 281 PREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAV 325
P E+ A +L L L +R F S+ Y+ GD+ VAV
Sbjct: 181 PAEIYATVLNYIGKDPNSSDANDYNGAANDLLLKLRPNIRYFHSSQYINDLANGDICVAV 240
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASRLETK 368
GWS DV+ A R N+A +PK GA ++ D++A+PA ++ T+
Sbjct: 241 GWSGDVMQAANRAKEAKNGVNIAYSIPKEGALVFFDVFAMPADAKNTTE 289
>gi|419299149|ref|ZP_13841162.1| putrescine-binding periplasmic protein [Escherichia coli DEC11C]
gi|419873077|ref|ZP_14395081.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O103:H2 str. CVM9450]
gi|378155103|gb|EHX16163.1| putrescine-binding periplasmic protein [Escherichia coli DEC11C]
gi|388332378|gb|EIK99049.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O103:H2 str. CVM9450]
Length = 295
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 78/172 (45%), Gaps = 31/172 (18%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQ---NHNLAPIEDWKDPWWPELAGR-----ISMVN 279
DP K +A PY W T IGY K + N AP++ W PE + +S ++
Sbjct: 124 DPDNK-FAMPYMWATTGIGYNVDKVKAVLGEN-APVDSWDLILKPENLEKLKSCGVSFLD 181
Query: 280 SPREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVA 324
+P EV A +L L L +R F S+ Y+ GD+ VA
Sbjct: 182 APEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVA 241
Query: 325 VGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASRLETKQI 370
+GW+ DV A R NV+ +PK GA + D++A+PA ++ +TK I
Sbjct: 242 IGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAKKKTKPI 293
>gi|374574738|ref|ZP_09647834.1| spermidine/putrescine-binding periplasmic protein [Bradyrhizobium
sp. WSM471]
gi|374423059|gb|EHR02592.1| spermidine/putrescine-binding periplasmic protein [Bradyrhizobium
sp. WSM471]
Length = 368
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 75/164 (45%), Gaps = 28/164 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP G ++AA Y WGT IGY +K + A IE W + PE + + M++S
Sbjct: 123 DP-GNVYAANYMWGTTGIGYNVAKLKQILGADAKIESWDIVFKPENLAKFKDCGVHMLDS 181
Query: 281 PREVIVAG-GKIAVQQN-------------LALLANQVRLFDSTHYLKAFGIGDVWVAVG 326
++ A + + N +A + VR F S+ YL A G++ VG
Sbjct: 182 ADDIFPAALNYLGLDPNSTKQADLDKAADVVAKVRPSVRKFHSSEYLSALATGEICFVVG 241
Query: 327 WSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
WS D++ A R + + +PK GA ++ D AIPA +R
Sbjct: 242 WSGDIMQARARAAEAKSGIEIGYAIPKEGAQMFFDNLAIPADAR 285
>gi|421502860|ref|ZP_15949812.1| extracellular solute-binding protein [Pseudomonas mendocina DLHK]
gi|400346317|gb|EJO94675.1| extracellular solute-binding protein [Pseudomonas mendocina DLHK]
Length = 364
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 110/262 (41%), Gaps = 42/262 (16%)
Query: 138 LRVVSLQNSVPQSWVKDFMRSQGKRLK---FQMNLCASIDGIVNN----LSTPFNK-LSF 189
LRV + + + KDF + G R+ F+ N + N L P N+ L
Sbjct: 27 LRVYNWADYILPEVPKDFQKESGIRITWDTFETNEALEAKLLTGNSGYDLVIPSNQFLET 86
Query: 190 AIKKRFIEPIAEAEDQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIGYKK 249
IK P+ +++ +W K L L ND G + PY +GT+ IGY
Sbjct: 87 QIKAGVFAPLDKSKLPNW-KNLDPVLLGLLEKNDPG------NQYGVPYMYGTVLIGYNP 139
Query: 250 SKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNSPREVI-VAGGKIAVQQNLALLA 301
K + + AP+ W + PE + ++M++SP E+I +A + + N + A
Sbjct: 140 DKVKAALGDDAPVNSWDLVFKPEYMEKLKSCGVAMLDSPTEIIPIALHYLGLDPNSSNPA 199
Query: 302 NQ-------------VRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRM---SNVAVV- 344
+ V F S Y+ GD+ VA+G+S R N V+
Sbjct: 200 DYDKVTELLLKVRPYVAYFHSAKYMTDIANGDICVAIGYSGSFYQFANRAKEAGNGVVIN 259
Query: 345 --VPKSGASLWADLWAIPAASR 364
+PK GA +W D WAIP +++
Sbjct: 260 WRLPKEGAPIWFDTWAIPKSAQ 281
>gi|354597990|ref|ZP_09016007.1| extracellular solute-binding protein family 1 [Brenneria sp.
EniD312]
gi|353675925|gb|EHD21958.1| extracellular solute-binding protein family 1 [Brenneria sp.
EniD312]
Length = 369
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 73/165 (44%), Gaps = 29/165 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQNH--NLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP K +A PY W T IGY K + AP++ W PE + +S +++
Sbjct: 123 DPDNK-YALPYLWATTGIGYNVDKVKAALGADAPLDSWDLVLKPENLEKLKSCGVSFLDA 181
Query: 281 PREVIV---------AGGKIAVQQN------LALLANQVRLFDSTHYLKAFGIGDVWVAV 325
P E+ A A N L L +R F S+ Y+ GD+ VA+
Sbjct: 182 PEEIFATVLNYQGKDANSSKAADYNGSATELLLKLRPSIRYFHSSQYINDLANGDICVAI 241
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
GW+ DV+ A R NV +PK GA + D++A+PA ++
Sbjct: 242 GWAGDVMQAANRAKEAKNGVNVHYSIPKEGALAFFDVFAVPADAK 286
>gi|365837890|ref|ZP_09379247.1| putrescine-binding periplasmic protein [Hafnia alvei ATCC 51873]
gi|364561081|gb|EHM38995.1| putrescine-binding periplasmic protein [Hafnia alvei ATCC 51873]
Length = 368
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 77/169 (45%), Gaps = 29/169 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGY--KKSKFQNHNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP K +A PY + T IGY +K K AP+ W PE + +S +++
Sbjct: 122 DPDNK-YAIPYTFATTGIGYNVEKVKAALGKDAPVNSWDLVLKPENLEKLKSCGVSFLDA 180
Query: 281 PREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAV 325
P E+ A +L L L +R F S+ Y+ GD+ VAV
Sbjct: 181 PAEIYATVLNYIGKDPNSSDANDYNGAANDLLLKLRPNIRYFHSSQYINDLANGDICVAV 240
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASRLETK 368
GWS DV+ A R N+A +PK GA ++ D++A+PA ++ T+
Sbjct: 241 GWSGDVMQAANRAKEAKNGVNIAYSIPKEGALVFFDVFAMPADAKNTTE 289
>gi|123441805|ref|YP_001005789.1| putrescine ABC transporter periplasmic-binding protein [Yersinia
enterocolitica subsp. enterocolitica 8081]
gi|420259064|ref|ZP_14761782.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Yersinia enterocolitica subsp.
enterocolitica WA-314]
gi|122088766|emb|CAL11571.1| putrescine-binding periplasmic protein precursor [Yersinia
enterocolitica subsp. enterocolitica 8081]
gi|404513431|gb|EKA27248.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Yersinia enterocolitica subsp.
enterocolitica WA-314]
Length = 369
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 76/168 (45%), Gaps = 29/168 (17%)
Query: 225 GEIDPRGKIWAAPYRWGTMAIGY--KKSKFQNHNLAPIEDWKDPWWPELAGR-----ISM 277
G+ DP K +A PY W T IGY +K K AP+ W PE + +S
Sbjct: 120 GKHDPDNK-YAIPYLWATTGIGYNVEKVKAALGKDAPVNSWDLVLKPENLEKLKSCGVSF 178
Query: 278 VNSPREV--------------IVAGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVW 322
+++P E+ I A L L L +R F S+ Y+ GD+
Sbjct: 179 LDAPSEIFATVLNYLGKDPNSIQATDYTGPATELLLKLRPNIRYFHSSQYINDLANGDIC 238
Query: 323 VAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
VAVGW+ D++ A R NVA +PK GA + D++A+PA ++
Sbjct: 239 VAVGWAGDIMQASNRAKEAKNGVNVAYSIPKEGALAFFDVFAMPADAK 286
>gi|330501318|ref|YP_004378187.1| extracellular solute-binding protein [Pseudomonas mendocina NK-01]
gi|328915604|gb|AEB56435.1| extracellular solute-binding protein [Pseudomonas mendocina NK-01]
Length = 365
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 97/218 (44%), Gaps = 36/218 (16%)
Query: 227 IDPR--GKIWAAPYRWGTMAIGY--KKSKFQNHNLAPIEDWKDPWWPELAGR-----ISM 277
+DP G ++ PY WGT+ IGY +K K AP++ W + PE + +S
Sbjct: 116 LDPSDPGNQYSVPYMWGTIGIGYNVEKVKAALGEDAPVDSWDLVFKPENMEKLKSCGVSF 175
Query: 278 VNSPREVIVAG-------------GKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWV 323
++SP E++ A G++ + L + + V F S+ Y+ G++ V
Sbjct: 176 LDSPTEILPAALHYLGYAPDSSDKGELQKAEELFMKIRPSVAYFHSSKYISDLANGNICV 235
Query: 324 AVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPA-ASRLETKQIG-GQVR 375
A+G+S D+ + R V +PK GA + D+ A+PA A +E + +
Sbjct: 236 AIGYSGDIYQSKARAEEAKNGVEVGYNIPKEGAGSFFDMLAVPADAKNVEAAHVFLNYLM 295
Query: 376 GPSPL--IHQWIEFCLQTARALPFKQEVI---PGASPS 408
P + I +++F A A P E + PG PS
Sbjct: 296 KPEVMASITNYVQFPNGNAAATPLVDEALRTDPGVYPS 333
>gi|157374200|ref|YP_001472800.1| extracellular solute-binding protein [Shewanella sediminis HAW-EB3]
gi|157316574|gb|ABV35672.1| extracellular solute-binding protein, family 1 [Shewanella
sediminis HAW-EB3]
Length = 366
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 77/161 (47%), Gaps = 28/161 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGRIS-----MVNS 280
DP G +A PY WGT IGY ++K + AP++ + + P+ A ++S ++S
Sbjct: 121 DP-GNQYAVPYLWGTNGIGYNEAKVKEVLGEDAPVDSLELIFNPKYASKLSKCGLSFLDS 179
Query: 281 PREVI-VAGGKIAVQQN-------------LALLANQVRLFDSTHYLKAFGIGDVWVAVG 326
E++ +A + + N L + + F S+ Y+ GD+ VAVG
Sbjct: 180 ADEMVPMALIYLGLDPNSSKKDDFKRAGEVLEAIRPHITYFHSSRYITDLANGDLCVAVG 239
Query: 327 WSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIPA 361
+S D+L A R + +PK GA+LW D+ AIPA
Sbjct: 240 YSGDILQAATRAEEAENGHVIGYSIPKEGANLWFDMLAIPA 280
>gi|238762095|ref|ZP_04623068.1| Putrescine-binding periplasmic protein [Yersinia kristensenii ATCC
33638]
gi|238699823|gb|EEP92567.1| Putrescine-binding periplasmic protein [Yersinia kristensenii ATCC
33638]
Length = 369
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 76/168 (45%), Gaps = 29/168 (17%)
Query: 225 GEIDPRGKIWAAPYRWGTMAIGY--KKSKFQNHNLAPIEDWKDPWWPELAGR-----ISM 277
G+ DP K +A PY W T IGY +K K AP+ W PE + +S
Sbjct: 120 GKHDPDNK-YAIPYLWATTGIGYNVEKVKAALGKDAPVNSWDLVLKPENLEKLKSCGVSF 178
Query: 278 VNSPREV--------------IVAGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVW 322
+++P E+ I A L L L +R F S+ Y+ GD+
Sbjct: 179 LDAPSEIFATVLNYLGKDPNSIQATDYTGPATELLLKLRPNIRYFHSSQYINDLANGDIC 238
Query: 323 VAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
VAVGW+ D++ A R NVA +PK GA + D++A+PA ++
Sbjct: 239 VAVGWAGDIMQASNRAKEAKNGVNVAYSIPKEGALAFFDVFAMPADAK 286
>gi|402701746|ref|ZP_10849725.1| putrescine ABC transporter substrate-binding protein [Pseudomonas
fragi A22]
Length = 362
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 76/166 (45%), Gaps = 28/166 (16%)
Query: 226 EIDPRGKIWAAPYRWGTMAIGYKKSKF-QNHNLAPIEDWKDPWWPELAGR-----ISMVN 279
E + G +A PY WGT IGY K Q + I+ W + PE + ++ ++
Sbjct: 115 EANDPGNEYAVPYLWGTNGIGYNVDKVKQVLGIDKIDSWSVLFEPENLKKLKSCGVAFMD 174
Query: 280 SPREVIVA---------------GGKIAVQQNLALLANQVRLFDSTHYLKAFGIGDVWVA 324
S EV+ + K+A ++ L L + F S+ Y+ GD+ +A
Sbjct: 175 SADEVMPSMLNYLGLDARSLKPEDYKVA-EKKLQPLRPYISYFHSSKYVTDLANGDICIA 233
Query: 325 VGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
G+S DV A+ R N+A VVPK G +LW D+ IPA ++
Sbjct: 234 FGYSGDVYQAIHRAQEAGNGVNIAYVVPKEGGNLWFDMLTIPADAK 279
>gi|452750134|ref|ZP_21949886.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas stutzeri NF13]
gi|452005784|gb|EMD98064.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas stutzeri NF13]
Length = 365
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 94/215 (43%), Gaps = 35/215 (16%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP G ++ PY WGT+ IGY K + AP++ W + PE + +S ++S
Sbjct: 120 DP-GNQYSIPYMWGTIGIGYNVDKVKAVLGENAPVDSWDLVFKPENIEKLKSCGVSFLDS 178
Query: 281 PREVIVAG----------GKIAVQQNLALLANQVR----LFDSTHYLKAFGIGDVWVAVG 326
P E++ A GK + L Q+R F S+ Y+ G+ VA+G
Sbjct: 179 PTEILPAALHYLGYAPDSGKADELKKAEELFMQIRPHVAYFHSSKYISDLANGESCVAIG 238
Query: 327 WSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPA-ASRLETKQ-IGGQVRGPS 378
+S D+ A R NV +PK GA + D+ A+PA A +++ + P
Sbjct: 239 YSGDIYQAKARAEEAGNGVNVGYKIPKEGAGSFFDMLAVPADAKNVDSAHAFINYLMKPE 298
Query: 379 PL--IHQWIEFCLQTARALPFKQEVI---PGASPS 408
+ I +++F A A P E I PG PS
Sbjct: 299 VMASITDYVQFPNGNAAATPLVDEAIRTDPGIYPS 333
>gi|384219733|ref|YP_005610899.1| hypothetical protein BJ6T_60570 [Bradyrhizobium japonicum USDA 6]
gi|354958632|dbj|BAL11311.1| hypothetical protein BJ6T_60570 [Bradyrhizobium japonicum USDA 6]
Length = 375
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 92/204 (45%), Gaps = 30/204 (14%)
Query: 188 SFAIKKRFIEPIAEAEDQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIGY 247
++ ++++ I + D+ LS+ W V + G DP G ++AA Y WGT IGY
Sbjct: 92 AYFLQRQIKANIFQKLDKSKLPNLSNAWPVV--TERLGIYDP-GNVYAANYMWGTTGIGY 148
Query: 248 KKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNSPREVIVAG-GKIAVQQN--- 296
+K + A I+ W + PE + + M++S ++ A + + N
Sbjct: 149 NVAKVKQILGADAKIDSWDIVFKPENLAKFKDCGVHMLDSADDIFPAALNYLGLDPNSTK 208
Query: 297 ----------LALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------N 340
+A + VR F S+ YL A G++ VGWS D++ A R +
Sbjct: 209 PADLEKAADVVAKVRPSVRKFHSSEYLSALATGEICFVVGWSGDIMQARARAAEAKSGIE 268
Query: 341 VAVVVPKSGASLWADLWAIPAASR 364
+ +PK GA ++ D AIPA ++
Sbjct: 269 IGYTIPKEGAQMFFDNLAIPADAK 292
>gi|398973895|ref|ZP_10684687.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM25]
gi|398142322|gb|EJM31222.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM25]
Length = 362
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 74/179 (41%), Gaps = 32/179 (17%)
Query: 209 KRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIGYKKSKF-QNHNLAPIEDWKDPW 267
K L K L ND G + PY WGT IGY K Q + I+ W +
Sbjct: 104 KNLDPKLLALLEKNDPGNEH------SVPYLWGTNGIGYNVDKVKQVLGIDHIDSWAVLF 157
Query: 268 WPELAGR-----ISMVNSPREVIVA--------------GGKIAVQQNLALLANQVRLFD 308
PE + +SM++S EV A ++ L + + F
Sbjct: 158 EPENLKKLTQCGVSMMDSADEVFPAILNYMGMDPRSEKPEDYKKAEEKLLSIRPYITYFH 217
Query: 309 STHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPA 361
S+ Y+ GD+ VA G+S DV A R N+A +PK GA+LW DL AIPA
Sbjct: 218 SSKYVSDLANGDICVAFGYSGDVFQAANRAKEAKNGVNIAYSIPKEGANLWFDLLAIPA 276
>gi|399518688|ref|ZP_10759642.1| extracellular solute-binding protein [Pseudomonas pseudoalcaligenes
CECT 5344]
gi|399113182|emb|CCH36200.1| extracellular solute-binding protein [Pseudomonas pseudoalcaligenes
CECT 5344]
Length = 364
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 110/262 (41%), Gaps = 42/262 (16%)
Query: 138 LRVVSLQNSVPQSWVKDFMRSQGKRLK---FQMNLCASIDGIVNN----LSTPFNK-LSF 189
LRV + + + KDF + G ++ F+ N + N L P N+ L
Sbjct: 27 LRVYNWADYILPEVPKDFQKESGIQITWDTFETNEALEAKLLTGNSGYDLVIPSNQFLET 86
Query: 190 AIKKRFIEPIAEAEDQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIGYKK 249
IK P+ +++ +W K L L ND G + PY +GT+ IGY
Sbjct: 87 QIKAGVFAPLDKSKLPNW-KNLDPVLLGLLEKNDPG------NQYGVPYMYGTVLIGYNP 139
Query: 250 SKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNSPREVI-VAGGKIAVQQNLALLA 301
K + + AP+ W + PE + ++M++SP E+I +A + + N A A
Sbjct: 140 DKVKAALGDDAPVNSWDLVFKPEYMEKLKSCGVAMLDSPTEIIPIALHYLGLDPNSANPA 199
Query: 302 NQ-------------VRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRM---SNVAVV- 344
+ V F S Y+ GD+ VA+G+S R N V+
Sbjct: 200 DYDKVTELLLKVRPYVAYFHSAKYMTDIANGDICVAIGYSGSFYQFANRAKEAGNGVVIN 259
Query: 345 --VPKSGASLWADLWAIPAASR 364
+PK GA +W D WAIP +++
Sbjct: 260 WRLPKEGAPIWFDTWAIPKSAQ 281
>gi|229590032|ref|YP_002872151.1| putrescine ABC transporter substrate-binding protein [Pseudomonas
fluorescens SBW25]
gi|229361898|emb|CAY48798.1| putrescine ABC transporter, substrate-binding protein [Pseudomonas
fluorescens SBW25]
Length = 362
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 76/180 (42%), Gaps = 32/180 (17%)
Query: 208 FKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIGYKKSKF-QNHNLAPIEDWKDP 266
FK L K L ND G + PY WGT IGY K Q + I+ W
Sbjct: 103 FKNLDPKLLALLEKNDPGNAH------SVPYLWGTNGIGYNVDKVKQVLGVDRIDSWAVL 156
Query: 267 WWPELAGR-----ISMVNSPREVIVAG----GKIAVQQN----------LALLANQVRLF 307
+ PE + ++ ++S E+ A GK +N L L + F
Sbjct: 157 FEPENIKKLNQCGVAFLDSADELFPAILNYLGKDPRSENPEDYKQAEAKLLTLRPYITYF 216
Query: 308 DSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPA 361
S+ Y+ GD+ VA G+S DV A R N+A +PK G++LW DL AIPA
Sbjct: 217 HSSKYISDLANGDICVAFGYSGDVFQAANRAKEAKNGVNIAYSIPKEGSNLWFDLLAIPA 276
>gi|293396880|ref|ZP_06641154.1| putrescine ABC superfamily ATP binding cassette transporter,
binding protein [Serratia odorifera DSM 4582]
gi|291420351|gb|EFE93606.1| putrescine ABC superfamily ATP binding cassette transporter,
binding protein [Serratia odorifera DSM 4582]
Length = 369
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 74/165 (44%), Gaps = 29/165 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQNH--NLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP K +A PY W T IGY K + AP++ W PE + +S +++
Sbjct: 123 DPENK-YAIPYLWATTGIGYNVDKVKAALGKDAPVDSWDLVLKPENLEKLKSCGVSFLDA 181
Query: 281 PREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAV 325
P E+ A +L L L VR F S+ Y+ GD+ VA+
Sbjct: 182 PSEIFATVLNYLGKDPNSSDAKDYTGPATDLLLKLRPSVRYFHSSQYINDLANGDICVAI 241
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
GW+ DV+ A R NVA +PK GA + D++A+PA ++
Sbjct: 242 GWAGDVMQASNRAKDAKNGVNVAYSIPKEGALAFFDVFAMPADAK 286
>gi|260547020|ref|ZP_05822759.1| extracellular solute-binding protein family 1 [Brucella abortus
NCTC 8038]
gi|260096070|gb|EEW79947.1| extracellular solute-binding protein family 1 [Brucella abortus
NCTC 8038]
Length = 374
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 114/272 (41%), Gaps = 46/272 (16%)
Query: 131 TYALTVPLRVVSLQN---SVPQSWVKDFMRSQGKRLKF---------QMNLCASIDGIVN 178
T++ RVV++ N + S +KDF + G ++ + + L A +G
Sbjct: 28 TFSAGAQERVVNIYNWSDYIDDSILKDFTKETGIKVVYDVYDSNEILETKLLAGGNGY-- 85
Query: 179 NLSTPFNKLSFAIKKRFIEPIAEAEDQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPY 238
+L P + + ++ + D+D L + W S A DP G ++ Y
Sbjct: 86 DLVVPSGEF---LGRQIPAGVFLKLDKDKLPNLKNMWDEI--STRAATYDP-GNEYSVNY 139
Query: 239 RWGTMAIGYKKSKFQNH-NLAPIEDWKDPWWPELAGR-----ISMVNSPREVIVAG---- 288
WGT IGY K+K + I+ W + PE + I +++S E++
Sbjct: 140 MWGTTGIGYNKAKIKEALGTDTIDSWDVLFDPEKTAKLKDCGIYLLDSASEMLRPALNYL 199
Query: 289 ---------GKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRM 338
+ Q+L L + +R F S+ Y+ A GD+ +AVG+S D+ A R
Sbjct: 200 GLDPNSPSPDDLQKAQDLYLKIRPNIRKFHSSEYINALANGDICMAVGYSGDIFQARDRA 259
Query: 339 S------NVAVVVPKSGASLWADLWAIPAASR 364
+ +PK GA +W D AIPA ++
Sbjct: 260 EKAKQGVEIGYSIPKEGALIWFDQMAIPADAK 291
>gi|47566174|ref|ZP_00237202.1| PotD [Bacillus cereus G9241]
gi|47556727|gb|EAL15058.1| PotD [Bacillus cereus G9241]
Length = 349
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 63/152 (41%), Gaps = 19/152 (12%)
Query: 227 IDPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVIV 286
DP K ++ Y WG I Y K + P W D W + G ++++N REV+
Sbjct: 120 FDPENK-YSLVYTWGVTGIAYNKKYVKE---VPTS-WADLWNEKYKGHVTLLNDSREVLG 174
Query: 287 AGGKI--------------AVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVL 332
G K +L L + FD+ + + F D W+ WS D
Sbjct: 175 MGLKKHGFSNSTKDDAQLKTAATDLQKLLPNLLAFDTDNIKQKFITEDAWIGTVWSGDAA 234
Query: 333 PAVKRMSNVAVVVPKSGASLWADLWAIPAASR 364
K +V VVPK G ++WAD AIP ++
Sbjct: 235 FIAKDNKDVEYVVPKEGGTIWADTLAIPKGAK 266
>gi|433773782|ref|YP_007304249.1| spermidine/putrescine-binding periplasmic protein [Mesorhizobium
australicum WSM2073]
gi|433665797|gb|AGB44873.1| spermidine/putrescine-binding periplasmic protein [Mesorhizobium
australicum WSM2073]
Length = 365
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 80/184 (43%), Gaps = 29/184 (15%)
Query: 204 DQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIGYKKSKFQNH-NLAPIED 262
D+ LS+ W + + DP G ++ Y WGT+ IGY K Q I+
Sbjct: 99 DKSKLPNLSNMWDTV--TERTAKYDP-GNEYSVNYMWGTVGIGYNTKKVQAALGTDKIDS 155
Query: 263 WKDPWWPELAGR-----ISMVNSPREVIVAGGKI--------------AVQQNLALLANQ 303
W + P+ + + +++SP +++ A K ++ L +
Sbjct: 156 WDTFFNPDSLAKLKHCGVYVLDSPSDILPAALKYLGLDPNSTSPDDIAKAEEALLKVRPY 215
Query: 304 VRLFDSTHYLKAFGIGDVWVAVGWSSDVLPA------VKRMSNVAVVVPKSGASLWADLW 357
+R F S+ Y+ A GD+ +AVGWS DV A K+ + VPK GA +W D
Sbjct: 216 IRKFHSSEYINALANGDICLAVGWSGDVFQARNRAVEAKQGVEIGYSVPKEGAQMWFDQM 275
Query: 358 AIPA 361
AIPA
Sbjct: 276 AIPA 279
>gi|146305384|ref|YP_001185849.1| extracellular solute-binding protein [Pseudomonas mendocina ymp]
gi|421505532|ref|ZP_15952470.1| extracellular solute-binding protein [Pseudomonas mendocina DLHK]
gi|145573585|gb|ABP83117.1| extracellular solute-binding protein, family 1 [Pseudomonas
mendocina ymp]
gi|400343941|gb|EJO92313.1| extracellular solute-binding protein [Pseudomonas mendocina DLHK]
Length = 365
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 98/218 (44%), Gaps = 36/218 (16%)
Query: 227 IDPR--GKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISM 277
+DP G ++ PY WGT+ IGY K + + AP++ W + PE + +S
Sbjct: 116 LDPSDPGNQYSIPYMWGTIGIGYNVDKVKAVLGDDAPVDSWDLVFKPENMEKLKSCGVSF 175
Query: 278 VNSPREVIVA-------------GGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWV 323
++SP E++ A ++ + L L + V F S+ Y+ G++ V
Sbjct: 176 LDSPTEILPAALHYLGYAPDSSKADELKKAEELFLSIRPSVAYFHSSKYISDLANGNICV 235
Query: 324 AVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPA-ASRLETKQIG-GQVR 375
A+G+S D+ + R NV +PK GA + D+ A+PA A +E + +
Sbjct: 236 AIGYSGDIYQSKARAEEAKNGVNVGYNIPKEGAGSFFDMLAVPADAKNVEAAHVFLNYLM 295
Query: 376 GPSPL--IHQWIEFCLQTARALPFKQEVI---PGASPS 408
P+ + I +++F A A P E + PG P+
Sbjct: 296 EPAVMANITNYVQFPNGNAAATPLVDEALRTDPGVYPT 333
>gi|24372851|ref|NP_716893.1| ABC-type putrescine uptake system substrate-binding component PotF
[Shewanella oneidensis MR-1]
gi|24346959|gb|AAN54338.1| ABC-type putrescine uptake system substrate-binding component PotF
[Shewanella oneidensis MR-1]
Length = 367
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 100/230 (43%), Gaps = 47/230 (20%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQ---NHNLAPIEDWKDPWWPELAGRIS-----MVN 279
DP G +A PY WGT IGY +K + + P + + P+ A +IS M++
Sbjct: 121 DP-GNQYAVPYLWGTNGIGYNINKVKAAVGEDAPPFNSMELIFNPKYAEKISKCGFAMLD 179
Query: 280 S-----PREVIVAG-----GKIAVQQNLALLANQVR----LFDSTHYLKAFGIGDVWVAV 325
S P+ +I G K + L ++R F S+ Y+ GD+ VA
Sbjct: 180 SADDMVPQAMIYLGLDPNSTKAEDYEKAGELLEKIRPYVTYFHSSRYISDLANGDICVAY 239
Query: 326 GWSSDVLPAVKRM------SNVAVVVPKSGASLWADLWAIPA-ASRLETKQIGGQVRGPS 378
G+S DV A R + + +PK GA+LW D+ AIPA A+ +E
Sbjct: 240 GFSGDVFQAAARADEAGNGNKIGYSIPKEGANLWFDMLAIPADATNVENA---------- 289
Query: 379 PLIHQWIEFCLQTARALPFKQEVIPGASPSALESTLVKLPEELLKGKPSV 428
H+ I + L+ P V A+P+ L LV +E ++ P++
Sbjct: 290 ---HKLINYLLRPEVIAPISNYV-AYANPNDLAQPLV---DEAIRNDPAI 332
>gi|374705415|ref|ZP_09712285.1| ABC transporter substrate-binding protein [Pseudomonas sp. S9]
Length = 358
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 76/167 (45%), Gaps = 28/167 (16%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGRIS------MVN 279
DP G + PY WGT IGY K + + P++ W + PE ++S + N
Sbjct: 113 DP-GNQYGFPYLWGTTGIGYNVDKVRAVLGDDVPLDSWDIIFKPENMKKLSKCGVAILDN 171
Query: 280 SPREVIVAGGKIAVQQN-------------LALLANQVRLFDSTHYLKAFGIGDVWVAVG 326
P + +A + + + L + V F S+ Y+ GD+ VAVG
Sbjct: 172 GPELLPIALHYLGLPHHSKDPADYKKAEALLLQMRENVLYFHSSKYVSDLANGDICVAVG 231
Query: 327 WSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIPAASRLET 367
+S D+L + R ++ + VVPK GA LW D+ A+PA S+ E
Sbjct: 232 FSGDILQSATRAADANNGVHIDYVVPKEGAPLWFDMVAMPADSKNEA 278
>gi|189024715|ref|YP_001935483.1| spermidine/putrescine ABC transporter periplasmic protein [Brucella
abortus S19]
gi|237815998|ref|ZP_04594995.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A]
gi|189020287|gb|ACD73009.1| hypothetical spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Brucella abortus
S19]
gi|237789296|gb|EEP63507.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A]
Length = 381
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 114/272 (41%), Gaps = 46/272 (16%)
Query: 131 TYALTVPLRVVSLQN---SVPQSWVKDFMRSQGKRLKF---------QMNLCASIDGIVN 178
T++ RVV++ N + S +KDF + G ++ + + L A +G
Sbjct: 35 TFSAGAQERVVNIYNWSDYIDDSILKDFTKETGIKVVYDVYDSNEILETKLLAGGNGY-- 92
Query: 179 NLSTPFNKLSFAIKKRFIEPIAEAEDQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPY 238
+L P + + ++ + D+D L + W S A DP G ++ Y
Sbjct: 93 DLVVPSGEF---LGRQIPAGVFLKLDKDKLPNLKNMWDEI--STRAATYDP-GNEYSVNY 146
Query: 239 RWGTMAIGYKKSKFQNH-NLAPIEDWKDPWWPELAGR-----ISMVNSPREVIVAG---- 288
WGT IGY K+K + I+ W + PE + I +++S E++
Sbjct: 147 MWGTTGIGYNKAKIKEALGTDTIDSWDVLFDPEKTAKLKDCGIYLLDSASEMLRPALNYL 206
Query: 289 ---------GKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRM 338
+ Q+L L + +R F S+ Y+ A GD+ +AVG+S D+ A R
Sbjct: 207 GLDPNSPSPDDLQKAQDLYLKIRPNIRKFHSSEYINALANGDICMAVGYSGDIFQARDRA 266
Query: 339 S------NVAVVVPKSGASLWADLWAIPAASR 364
+ +PK GA +W D AIPA ++
Sbjct: 267 EKAKQGVEIGYSIPKEGALIWFDQMAIPADAK 298
>gi|238794852|ref|ZP_04638452.1| Putrescine-binding periplasmic protein [Yersinia intermedia ATCC
29909]
gi|238725795|gb|EEQ17349.1| Putrescine-binding periplasmic protein [Yersinia intermedia ATCC
29909]
Length = 369
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 94/221 (42%), Gaps = 38/221 (17%)
Query: 225 GEIDPRGKIWAAPYRWGTMAIGY--KKSKFQNHNLAPIEDWKDPWWPELAGR-----ISM 277
G+ DP K +A PY W T IGY +K K AP+ W PE + +S
Sbjct: 120 GKHDPENK-YAIPYLWATTGIGYNVEKVKAALGKDAPVNSWDLVLKPENLEKLKSCGVSF 178
Query: 278 VNSPREVIVAG----GKI------------AVQQNLALLANQVRLFDSTHYLKAFGIGDV 321
+++P E+ GK A + L L N +R F S+ Y+ GD+
Sbjct: 179 LDAPAEIFATVLNYLGKDPNSLQATDYTGPATELLLKLRPN-IRYFHSSQYINDLANGDI 237
Query: 322 WVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIP--AASRLETKQIGGQ 373
VAVGW+ D++ A R NVA +PK GA + D++A+P A ++ E Q
Sbjct: 238 CVAVGWAGDIMQASNRAKEAKNGVNVAYSIPKEGALAFFDVFAMPSDAKNQDEAYQFLNY 297
Query: 374 VRGPSPL--IHQWIEFCLQTARALPFKQEVI---PGASPSA 409
+ P + I + + A P E + PG P A
Sbjct: 298 LMRPDVIANISNHVFYANANKAATPLVNEAVRDNPGIYPPA 338
>gi|84683820|ref|ZP_01011723.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Maritimibacter alkaliphilus HTCC2654]
gi|84668563|gb|EAQ15030.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Maritimibacter alkaliphilus HTCC2654]
Length = 361
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 83/184 (45%), Gaps = 30/184 (16%)
Query: 204 DQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIE 261
D+ + + W V D + DP G+ +A Y WGT IG K + AP +
Sbjct: 94 DKAQLPNIENMWDVVSTRTD--KYDPGGE-YAINYMWGTTGIGINTGKVAEVLGDDAPTD 150
Query: 262 DWK---DPWWPELAGR--ISMVNSPREVIVAG-------------GKIA-VQQNLALLAN 302
W DP E + +++P E+I A IA V++ + +A
Sbjct: 151 SWALVFDPANMEKLAECGVHFLDAPAEMIPAALNYIGEDPDSHDPDVIAKVEEVYSGIAP 210
Query: 303 QVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWADL 356
++ F S+ Y++A GD+ VAVGWS D+L A R + + VVPK GA +W D
Sbjct: 211 YIQKFHSSEYIEALANGDICVAVGWSGDILQARDRAAEADNGNVIEYVVPKEGAQMWFDQ 270
Query: 357 WAIP 360
AIP
Sbjct: 271 MAIP 274
>gi|372267549|ref|ZP_09503597.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Alteromonas sp. S89]
Length = 365
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 78/167 (46%), Gaps = 30/167 (17%)
Query: 226 EIDPRGKIWAAPYRWGTMAIGYKKSKFQNH--NLAPIEDWKDPWWPELAGRISMVN---- 279
+ DP G +A PY WGT+ IGY + P + W + PE G++ N
Sbjct: 116 QFDP-GNQYAFPYLWGTVGIGYNVQAVEKAFGGTLPEDSWDLLFAPEYLGKLHHCNATLM 174
Query: 280 -SPREVIVAGGK----------IAVQQNLALLANQVRL----FDSTHYLKAFGIGDVWVA 324
SP E+ K IA Q +A L ++VRL FDS Y++ G+ +A
Sbjct: 175 RSPEEIFDVALKYLEKDPNSMSIAHQYMVANLLSRVRLHINDFDSGEYVEELASGERCIA 234
Query: 325 VGWSSDVLPAVKRMSNVA-------VVVPKSGASLWADLWAIPAASR 364
WS DVL A ++M+ A V+P+ G LW D+ +IP+ +R
Sbjct: 235 HAWSGDVLVA-QQMAEEAGKDFEIRYVMPREGFPLWIDVLSIPSNAR 280
>gi|77459054|ref|YP_348560.1| extracellular solute-binding protein [Pseudomonas fluorescens
Pf0-1]
gi|77383057|gb|ABA74570.1| putrescine ABC transporter, substrate-binding protein [Pseudomonas
fluorescens Pf0-1]
Length = 362
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 74/179 (41%), Gaps = 32/179 (17%)
Query: 209 KRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIGYKKSKF-QNHNLAPIEDWKDPW 267
K L K L ND G + PY WGT IGY K Q + I+ W +
Sbjct: 104 KNLDPKLLALLEKNDPGNEH------SVPYLWGTNGIGYNVDKVKQVLGIDHIDSWAVLF 157
Query: 268 WPELAGR-----ISMVNSPREVIVA--------------GGKIAVQQNLALLANQVRLFD 308
PE + +SM++S EV A ++ L + + F
Sbjct: 158 EPENLKKLTQCGVSMMDSADEVFPAILNYMGMDPRSEKPEDYKKAEEKLLSIRPYITYFH 217
Query: 309 STHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPA 361
S+ Y+ GD+ VA G+S DV A R N+A +PK GA+LW DL AIPA
Sbjct: 218 SSKYVSDLANGDICVAFGYSGDVFRAANRAKEAKNGVNIAYSIPKEGANLWFDLLAIPA 276
>gi|150395537|ref|YP_001326004.1| extracellular solute-binding protein [Sinorhizobium medicae WSM419]
gi|150027052|gb|ABR59169.1| extracellular solute-binding protein family 1 [Sinorhizobium
medicae WSM419]
Length = 364
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 118/262 (45%), Gaps = 48/262 (18%)
Query: 139 RVVSLQN---SVPQSWVKDFMRSQGKRLKF---------QMNLCASIDGIVNNLSTPFNK 186
RVV++ N + S + DF + G ++ + + L A G ++ P
Sbjct: 26 RVVNVYNWSDYIDDSILADFTKETGIKVVYDVFDSNEILETKLLAGGSGY--DVVVP--- 80
Query: 187 LSFAIKKRFIEPIAEAEDQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIG 246
++ ++++ + + D+ LS+ W + + + DP G +A Y WGT IG
Sbjct: 81 TAYFLQRQIAAGVFQKLDKSKLPNLSNMWDMVMERT--AQYDP-GNEYAVDYMWGTTGIG 137
Query: 247 YKKSKFQNHNLAPIE--DWKDPWWPELAGR-----ISMVNSPREVI-VAGGKIAV----- 293
Y K + L E +W + PE++ + I +++SP +++ A + +
Sbjct: 138 YNVDKMK-EILGTDEKPNWDVIFDPEISAKFKDCGIHLLDSPTDIMPSALAYLGLNPDSH 196
Query: 294 -QQNLALLAN-------QVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRM--SNVAV 343
Q +L A+ +R F S+ Y+ A GD+ +AVG+S D+ A R +N V
Sbjct: 197 EQADLEKAADLLMKVRPNIRKFHSSEYINALANGDICLAVGFSGDIFQARDRAAEANAGV 256
Query: 344 VV----PKSGASLWADLWAIPA 361
V P+ GA +W D+ AIPA
Sbjct: 257 TVDYSIPEQGAQMWFDMLAIPA 278
>gi|62290491|ref|YP_222284.1| spermidine/putrescine ABC transporter periplasmic
spermidine/putrescine-binding protein [Brucella abortus
bv. 1 str. 9-941]
gi|82700414|ref|YP_414988.1| solute-binding family 1 protein [Brucella melitensis biovar Abortus
2308]
gi|260758545|ref|ZP_05870893.1| extracellular solute-binding protein family 1 [Brucella abortus bv.
4 str. 292]
gi|260762368|ref|ZP_05874711.1| extracellular solute-binding protein family 1 [Brucella abortus bv.
2 str. 86/8/59]
gi|376272658|ref|YP_005151236.1| Spermidine/putrescine-binding periplasmic protein [Brucella abortus
A13334]
gi|423166335|ref|ZP_17153038.1| hypothetical protein M17_00025 [Brucella abortus bv. 1 str. NI435a]
gi|423171291|ref|ZP_17157966.1| hypothetical protein M19_01824 [Brucella abortus bv. 1 str. NI474]
gi|423172627|ref|ZP_17159298.1| hypothetical protein M1A_00025 [Brucella abortus bv. 1 str. NI486]
gi|423178680|ref|ZP_17165324.1| hypothetical protein M1E_02920 [Brucella abortus bv. 1 str. NI488]
gi|423180722|ref|ZP_17167363.1| hypothetical protein M1G_01822 [Brucella abortus bv. 1 str. NI010]
gi|423183853|ref|ZP_17170490.1| hypothetical protein M1I_01822 [Brucella abortus bv. 1 str. NI016]
gi|423185207|ref|ZP_17171821.1| hypothetical protein M1K_00025 [Brucella abortus bv. 1 str. NI021]
gi|423188342|ref|ZP_17174952.1| hypothetical protein M1M_00024 [Brucella abortus bv. 1 str. NI259]
gi|62196623|gb|AAX74923.1| hypothetical spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Brucella abortus
bv. 1 str. 9-941]
gi|82616515|emb|CAJ11584.1| Bacterial periplasmic spermidine/putrescine-binding
protein:Bacterial extracellular solute-binding protein,
family 1 [Brucella melitensis biovar Abortus 2308]
gi|260668863|gb|EEX55803.1| extracellular solute-binding protein family 1 [Brucella abortus bv.
4 str. 292]
gi|260672800|gb|EEX59621.1| extracellular solute-binding protein family 1 [Brucella abortus bv.
2 str. 86/8/59]
gi|363400263|gb|AEW17233.1| Spermidine/putrescine-binding periplasmic protein [Brucella abortus
A13334]
gi|374538625|gb|EHR10133.1| hypothetical protein M19_01824 [Brucella abortus bv. 1 str. NI474]
gi|374543819|gb|EHR15297.1| hypothetical protein M17_00025 [Brucella abortus bv. 1 str. NI435a]
gi|374544146|gb|EHR15623.1| hypothetical protein M1A_00025 [Brucella abortus bv. 1 str. NI486]
gi|374544734|gb|EHR16200.1| hypothetical protein M1E_02920 [Brucella abortus bv. 1 str. NI488]
gi|374548253|gb|EHR19705.1| hypothetical protein M1G_01822 [Brucella abortus bv. 1 str. NI010]
gi|374548681|gb|EHR20129.1| hypothetical protein M1I_01822 [Brucella abortus bv. 1 str. NI016]
gi|374558904|gb|EHR30293.1| hypothetical protein M1M_00024 [Brucella abortus bv. 1 str. NI259]
gi|374559917|gb|EHR31300.1| hypothetical protein M1K_00025 [Brucella abortus bv. 1 str. NI021]
Length = 367
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 114/272 (41%), Gaps = 46/272 (16%)
Query: 131 TYALTVPLRVVSLQN---SVPQSWVKDFMRSQGKRLKF---------QMNLCASIDGIVN 178
T++ RVV++ N + S +KDF + G ++ + + L A +G
Sbjct: 21 TFSAGAQERVVNIYNWSDYIDDSILKDFTKETGIKVVYDVYDSNEILETKLLAGGNGY-- 78
Query: 179 NLSTPFNKLSFAIKKRFIEPIAEAEDQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPY 238
+L P + + ++ + D+D L + W S A DP G ++ Y
Sbjct: 79 DLVVPSGEF---LGRQIPAGVFLKLDKDKLPNLKNMWDEI--STRAATYDP-GNEYSVNY 132
Query: 239 RWGTMAIGYKKSKFQNH-NLAPIEDWKDPWWPELAGR-----ISMVNSPREVIVAG---- 288
WGT IGY K+K + I+ W + PE + I +++S E++
Sbjct: 133 MWGTTGIGYNKAKIKEALGTDTIDSWDVLFDPEKTAKLKDCGIYLLDSASEMLRPALNYL 192
Query: 289 ---------GKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRM 338
+ Q+L L + +R F S+ Y+ A GD+ +AVG+S D+ A R
Sbjct: 193 GLDPNSPSPDDLQKAQDLYLKIRPNIRKFHSSEYINALANGDICMAVGYSGDIFQARDRA 252
Query: 339 S------NVAVVVPKSGASLWADLWAIPAASR 364
+ +PK GA +W D AIPA ++
Sbjct: 253 EKAKQGVEIGYSIPKEGALIWFDQMAIPADAK 284
>gi|319782139|ref|YP_004141615.1| family 1 extracellular solute-binding protein [Mesorhizobium ciceri
biovar biserrulae WSM1271]
gi|317168027|gb|ADV11565.1| extracellular solute-binding protein family 1 [Mesorhizobium ciceri
biovar biserrulae WSM1271]
Length = 365
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 80/184 (43%), Gaps = 29/184 (15%)
Query: 204 DQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIGYKKSKFQNH-NLAPIED 262
D+ +S+ W S + DP G ++ Y WGT+ IGY K Q I+
Sbjct: 99 DKSKLPNISNMWDTV--SERTAKYDP-GNEYSVNYMWGTVGIGYNIKKVQAALGTDKIDS 155
Query: 263 WKDPWWPELAGR-----ISMVNSPREVIVAGGKI--------------AVQQNLALLANQ 303
W + P+ + + +++SP ++I A K ++ L +
Sbjct: 156 WDVFFNPDSLAKLKDCGVYVLDSPADIIPAALKYLGLDPNSTSPDDIAKAEETLLKVRPY 215
Query: 304 VRLFDSTHYLKAFGIGDVWVAVGWSSDVLPA------VKRMSNVAVVVPKSGASLWADLW 357
+R F S+ Y+ A GD+ +AVGWS DV A K+ + VPK GA +W D
Sbjct: 216 IRKFHSSEYINALANGDICLAVGWSGDVFQARNRAVEAKQGVEIGYSVPKEGAQMWFDQM 275
Query: 358 AIPA 361
AIPA
Sbjct: 276 AIPA 279
>gi|419955797|ref|ZP_14471919.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas stutzeri TS44]
gi|387967393|gb|EIK51696.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas stutzeri TS44]
Length = 361
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 81/191 (42%), Gaps = 39/191 (20%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQNH-NLAPIEDWKDPWWPELAGR-----ISMVNSP 281
DP G A PY WGT IGY K + + I+ W + P+ A + I+M++S
Sbjct: 117 DP-GNAHAVPYLWGTNGIGYNVEKVKAALGVDSIDSWAVLFEPQNAEKLASCGIAMLDSA 175
Query: 282 REVIVA--------------GGKIAVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGW 327
E+I A ++ L + VR F S+ Y+ G++ VA G+
Sbjct: 176 DEMIPAVLNYLGLDPNSENPADYRKAEEKLLAVRPHVRYFHSSKYISDLANGNICVAAGF 235
Query: 328 SSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIPAASRLETKQIGGQVRGPSPLI 381
S DV A R +A +PK G +LW D+ AIPA + G
Sbjct: 236 SGDVFQAAARAEEAGKGIEIAYAIPKEGGNLWFDMLAIPADA------------GNVEQA 283
Query: 382 HQWIEFCLQTA 392
H +I++ L+ A
Sbjct: 284 HAFIDYLLRPA 294
>gi|265984646|ref|ZP_06097381.1| extracellular solute-binding protein family 1 [Brucella sp. 83/13]
gi|306837729|ref|ZP_07470597.1| putrescine-binding periplasmic protein [Brucella sp. NF 2653]
gi|306844613|ref|ZP_07477200.1| putrescine-binding periplasmic protein [Brucella inopinata BO1]
gi|264663238|gb|EEZ33499.1| extracellular solute-binding protein family 1 [Brucella sp. 83/13]
gi|306275057|gb|EFM56820.1| putrescine-binding periplasmic protein [Brucella inopinata BO1]
gi|306407185|gb|EFM63396.1| putrescine-binding periplasmic protein [Brucella sp. NF 2653]
Length = 367
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 113/270 (41%), Gaps = 42/270 (15%)
Query: 131 TYALTVPLRVVSLQN---SVPQSWVKDFMRSQGKRLKFQMNLCASI-------DGIVNNL 180
T++ RVV++ N + S +KDF + G ++ + + I G +L
Sbjct: 21 TFSAGAQERVVNIYNWSDYIDDSILKDFTKETGIKVVYDVYDSNEILETKLLAGGSGYDL 80
Query: 181 STPFNKLSFAIKKRFIEPIAEAEDQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRW 240
P + + ++ + D+D L + W S A DP G ++ Y W
Sbjct: 81 VVPSGEF---LGRQIPAGVFLKLDKDKLPNLKNMWDEI--STRAATYDP-GNEYSVNYMW 134
Query: 241 GTMAIGYKKSKFQNH-NLAPIEDWKDPWWPELAGR-----ISMVNSPREVIVAG------ 288
GT IGY K+K + I+ W + PE + + I +++S E++
Sbjct: 135 GTTGIGYNKAKIKEALGTDTIDSWDVLFDPEKSAKLKDCGIYLLDSASEMLRPALNYLGL 194
Query: 289 -------GKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS- 339
+ Q+L L + +R F S+ Y+ A GD+ +AVG+S D+ A R
Sbjct: 195 DPNSPSPDDLQKAQDLYLKIRPNIRKFHSSEYINALANGDICMAVGYSGDIFQARDRAEK 254
Query: 340 -----NVAVVVPKSGASLWADLWAIPAASR 364
+ +PK GA +W D AIPA ++
Sbjct: 255 AKQGVEIGYSIPKEGALIWFDQMAIPADAK 284
>gi|260565177|ref|ZP_05835661.1| extracellular solute-binding protein family 1 [Brucella melitensis
bv. 1 str. 16M]
gi|261758783|ref|ZP_06002492.1| extracellular solute-binding protein family 1 [Brucella sp. F5/99]
gi|265999360|ref|ZP_06111663.1| extracellular solute-binding protein [Brucella melitensis bv. 2
str. 63/9]
gi|297248873|ref|ZP_06932591.1| putrescine transport system substrate-binding protein [Brucella
abortus bv. 5 str. B3196]
gi|260151245|gb|EEW86339.1| extracellular solute-binding protein family 1 [Brucella melitensis
bv. 1 str. 16M]
gi|261738767|gb|EEY26763.1| extracellular solute-binding protein family 1 [Brucella sp. F5/99]
gi|263093442|gb|EEZ17492.1| extracellular solute-binding protein [Brucella melitensis bv. 2
str. 63/9]
gi|297176042|gb|EFH35389.1| putrescine transport system substrate-binding protein [Brucella
abortus bv. 5 str. B3196]
Length = 374
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 112/270 (41%), Gaps = 42/270 (15%)
Query: 131 TYALTVPLRVVSLQN---SVPQSWVKDFMRSQGKRLKFQMNLCASI-------DGIVNNL 180
T++ RVV++ N + S +KDF + G ++ + + I G +L
Sbjct: 28 TFSAGAQERVVNIYNWSDYIDDSILKDFTKETGIKVVYDVYDSNEILETKLLAGGSGYDL 87
Query: 181 STPFNKLSFAIKKRFIEPIAEAEDQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRW 240
P + + ++ + D+D L + W S A DP G ++ Y W
Sbjct: 88 VVPSGEF---LGRQIPAGVFLKLDKDKLPNLKNMWDEI--STRAATYDP-GNEYSVNYMW 141
Query: 241 GTMAIGYKKSKFQNH-NLAPIEDWKDPWWPELAGR-----ISMVNSPREVIVAG------ 288
GT IGY K+K + I+ W + PE + I +++S E++
Sbjct: 142 GTTGIGYNKAKIKEALGTDTIDSWDVLFDPEKTAKLKDCGIYLLDSASEMLRPALNYLGL 201
Query: 289 -------GKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS- 339
+ Q+L L + +R F S+ Y+ A GD+ +AVG+S D+ A R
Sbjct: 202 DPNSPSPDDLQKAQDLYLKIRPNIRKFHSSEYINALANGDICMAVGYSGDIFQARDRAEK 261
Query: 340 -----NVAVVVPKSGASLWADLWAIPAASR 364
+ +PK GA +W D AIPA ++
Sbjct: 262 AKQGVEIGYSIPKEGALIWFDQMAIPADAK 291
>gi|421615516|ref|ZP_16056540.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas stutzeri KOS6]
gi|409782589|gb|EKN62144.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas stutzeri KOS6]
Length = 365
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 76/164 (46%), Gaps = 28/164 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP G ++ PY WGT+ IGY K + + AP+ W + PE + +S ++S
Sbjct: 120 DP-GNQYSIPYMWGTIGIGYNVEKVKAVLGDNAPVSSWDLVFKPENIEKLKSCGVSFLDS 178
Query: 281 PREVIVAG----------GKIAVQQNLALLANQVR----LFDSTHYLKAFGIGDVWVAVG 326
P E++ A GK + L Q+R F S+ Y+ G++ VA+G
Sbjct: 179 PTEILPAALHYLGYAPDSGKSGELKKAEELFMQIRPHVAYFHSSKYISDLANGNICVAIG 238
Query: 327 WSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
+S D+ A R NV +PK GA + D+ A+PA ++
Sbjct: 239 YSGDIYQAKARAEEAANGVNVGYKIPKEGAGSFFDMLAVPADAK 282
>gi|334315175|ref|YP_004547794.1| family 1 extracellular solute-binding protein [Sinorhizobium
meliloti AK83]
gi|384534820|ref|YP_005718905.1| putrescine-binding periplasmic protein [Sinorhizobium meliloti
SM11]
gi|407719548|ref|YP_006839210.1| putrescine-binding periplasmic protein [Sinorhizobium meliloti
Rm41]
gi|418399937|ref|ZP_12973482.1| family 1 extracellular solute-binding protein [Sinorhizobium
meliloti CCNWSX0020]
gi|334094169|gb|AEG52180.1| extracellular solute-binding protein family 1 [Sinorhizobium
meliloti AK83]
gi|336031712|gb|AEH77644.1| putrescine-binding periplasmic protein [Sinorhizobium meliloti
SM11]
gi|359506054|gb|EHK78571.1| family 1 extracellular solute-binding protein [Sinorhizobium
meliloti CCNWSX0020]
gi|407317780|emb|CCM66384.1| Putrescine-binding periplasmic protein [Sinorhizobium meliloti
Rm41]
Length = 364
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 93/201 (46%), Gaps = 31/201 (15%)
Query: 188 SFAIKKRFIEPIAEAEDQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIGY 247
++ ++++ + + D+ +S+ W + + + DP G +A Y WGT IGY
Sbjct: 82 AYFLQRQIAAGVFQKLDKSKLPNISNMWDMVMERT--AQYDP-GNEYAVDYMWGTTGIGY 138
Query: 248 KKSKFQNHNLAPIE--DWKDPWWPELAGR-----ISMVNSPREVIVAG-----------G 289
K + L E +W + PE+A + I +++SP +++ +
Sbjct: 139 NVEKMK-EILGTDEKPNWDVIFDPEIAAKFKDCGIHLLDSPTDIMPSALAYLGLNPDSHD 197
Query: 290 KIAVQQNLALLAN---QVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------N 340
+ +++ LL +R F S+ Y+ A GD+ +AVG+S DV A R +
Sbjct: 198 QADLEKAADLLMKVRPNIRKFHSSEYINALANGDICLAVGFSGDVFQARDRAAEAKAGVT 257
Query: 341 VAVVVPKSGASLWADLWAIPA 361
V +P+ GA +W D+ AIPA
Sbjct: 258 VDYSIPEQGAQMWFDMLAIPA 278
>gi|358451127|ref|ZP_09161561.1| extracellular solute-binding protein [Marinobacter manganoxydans
MnI7-9]
gi|357224360|gb|EHJ02891.1| extracellular solute-binding protein [Marinobacter manganoxydans
MnI7-9]
Length = 368
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 78/171 (45%), Gaps = 30/171 (17%)
Query: 222 NDAGEIDPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR----- 274
+D ++DP G +A PY WGT GY + + Q + AP + W + PE+ G+
Sbjct: 115 DDLEKVDP-GSQFALPYLWGTNGYGYNEGRIQEILGDSAPTDSWALVFDPEVTGKLAAGG 173
Query: 275 --ISMVNSPREVIVAG-GKIAVQQN-------------LALLANQVRLFDSTHYLKAFGI 318
I+M++S E++ A I + N + + + F S+ Y+
Sbjct: 174 CGIAMLDSGEEMVRAAMAYIGLDPNSNNADDIRKGGEVIKAIRPNITYFHSSRYIADLAN 233
Query: 319 GDVWVAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIPAAS 363
GD+ VA G+S D+L A R + +PK GA LW D+ IPA +
Sbjct: 234 GDLCVAAGYSGDILQAAARAEEAENGNVIRYTIPKEGAVLWFDMMTIPAGA 284
>gi|385330681|ref|YP_005884632.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Marinobacter adhaerens HP15]
gi|311693831|gb|ADP96704.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Marinobacter adhaerens HP15]
Length = 368
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 78/171 (45%), Gaps = 30/171 (17%)
Query: 222 NDAGEIDPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR----- 274
+D ++DP G +A PY WGT GY + + Q + AP + W + PE+ G+
Sbjct: 115 DDLEKVDP-GSQFALPYLWGTNGYGYNEGRIQEILGDSAPTDSWALVFDPEVTGKLATGG 173
Query: 275 --ISMVNSPREVIVAG-GKIAVQQN-------------LALLANQVRLFDSTHYLKAFGI 318
I+M++S E++ A I + N + + + F S+ Y+
Sbjct: 174 CGIAMLDSGEEMVRAAMAYIGLDPNSNNADDIKKGGEVIKAIRPNITYFHSSRYIGDLAN 233
Query: 319 GDVWVAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIPAAS 363
GD+ VA G+S D+L A R + +PK GA LW D+ IPA +
Sbjct: 234 GDLCVAAGYSGDILQAAARAEEAENGNVIRYTIPKEGAVLWFDMMTIPAGA 284
>gi|225628044|ref|ZP_03786080.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
gi|225617207|gb|EEH14253.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
Length = 381
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 112/270 (41%), Gaps = 42/270 (15%)
Query: 131 TYALTVPLRVVSLQN---SVPQSWVKDFMRSQGKRLKFQMNLCASI-------DGIVNNL 180
T++ RVV++ N + S +KDF + G ++ + + I G +L
Sbjct: 35 TFSAGAQERVVNIYNWSDYIDDSILKDFTKETGIKVVYDVYDSNEILETKLLAGGSGYDL 94
Query: 181 STPFNKLSFAIKKRFIEPIAEAEDQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRW 240
P + + ++ + D+D L + W S A DP G ++ Y W
Sbjct: 95 VVPSGEF---LGRQIPAGVFLKLDKDKLPNLKNMWDEI--STRAATYDP-GNEYSVNYMW 148
Query: 241 GTMAIGYKKSKFQNH-NLAPIEDWKDPWWPELAGR-----ISMVNSPREVIVAG------ 288
GT IGY K+K + I+ W + PE + I +++S E++
Sbjct: 149 GTTGIGYNKAKIKEALGTDTIDSWDVLFDPEKTAKLKDCGIYLLDSASEMLRPALNYLGL 208
Query: 289 -------GKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS- 339
+ Q+L L + +R F S+ Y+ A GD+ +AVG+S D+ A R
Sbjct: 209 DPNSPSPDDLQKAQDLYLKIRPNIRKFHSSEYINALANGDICMAVGYSGDIFQARDRAEK 268
Query: 340 -----NVAVVVPKSGASLWADLWAIPAASR 364
+ +PK GA +W D AIPA ++
Sbjct: 269 AKQGVEIGYSIPKEGALIWFDQMAIPADAK 298
>gi|383814371|ref|ZP_09969792.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Serratia sp. M24T3]
gi|383296781|gb|EIC85094.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Serratia sp. M24T3]
Length = 368
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 89/216 (41%), Gaps = 35/216 (16%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP G +A PY W T IGY K + AP+ W P+ + +S +++
Sbjct: 123 DP-GNKYAIPYLWATTGIGYNVDKVKAALGKDAPVNSWDLVLNPDNLAKLKGCGVSFLDA 181
Query: 281 PREVIVA--------------GGKIAVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVG 326
P E+ A L L +R F S+ Y+ GD+ VAVG
Sbjct: 182 PAEIYATVLNYLHLDPNSTKPEDYTAATDLLLKLRPSIRYFHSSQYINDLANGDICVAVG 241
Query: 327 WSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASRL--ETKQIGGQVRGPS 378
W+ DV+ A R N+A +PK GA + D++A+PA ++ E Q + P
Sbjct: 242 WAGDVIQASNRAKEAKNGVNIAYSIPKEGALAFFDVFAMPADAKNTDEAYQFLNYLMRPE 301
Query: 379 PL--IHQWIEFCLQTARALPFKQEVI---PGASPSA 409
+ I + + A A P + I PG PSA
Sbjct: 302 VMAGISNAVFYASGNAAATPLVKPEIRNNPGIYPSA 337
>gi|15964467|ref|NP_384820.1| putrescine-binding periplasmic protein [Sinorhizobium meliloti
1021]
gi|384528421|ref|YP_005712509.1| extracellular solute-binding protein [Sinorhizobium meliloti
BL225C]
gi|433612474|ref|YP_007189272.1| Spermidine/putrescine-binding periplasmic protein [Sinorhizobium
meliloti GR4]
gi|15073644|emb|CAC45286.1| Probable putrescine-binding periplasmic protein [Sinorhizobium
meliloti 1021]
gi|333810597|gb|AEG03266.1| extracellular solute-binding protein family 1 [Sinorhizobium
meliloti BL225C]
gi|429550664|gb|AGA05673.1| Spermidine/putrescine-binding periplasmic protein [Sinorhizobium
meliloti GR4]
Length = 364
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 93/201 (46%), Gaps = 31/201 (15%)
Query: 188 SFAIKKRFIEPIAEAEDQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIGY 247
++ ++++ + + D+ +S+ W + + + DP G +A Y WGT IGY
Sbjct: 82 AYFLQRQIAAGVFQKLDKSKLPNISNMWDMVMERT--AQYDP-GNEYAVDYMWGTTGIGY 138
Query: 248 KKSKFQNHNLAPIE--DWKDPWWPELAGR-----ISMVNSPREVIVAG-----------G 289
K + L E +W + PE+A + I +++SP +++ +
Sbjct: 139 NVEKMK-EILGTDEKPNWDVIFDPEIAAKFKDCGIHLLDSPTDIMPSALAYLGLNPDSHD 197
Query: 290 KIAVQQNLALLAN---QVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------N 340
+ +++ LL +R F S+ Y+ A GD+ +AVG+S DV A R +
Sbjct: 198 QADLEKAADLLMKVRPNIRKFHSSEYINALANGDICLAVGFSGDVFQARDRAAEAKAGVT 257
Query: 341 VAVVVPKSGASLWADLWAIPA 361
V +P+ GA +W D+ AIPA
Sbjct: 258 VDYSIPEQGAQMWFDMLAIPA 278
>gi|420241083|ref|ZP_14745247.1| spermidine/putrescine-binding periplasmic protein [Rhizobium sp.
CF080]
gi|398072841|gb|EJL64038.1| spermidine/putrescine-binding periplasmic protein [Rhizobium sp.
CF080]
Length = 365
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 112/268 (41%), Gaps = 55/268 (20%)
Query: 138 LRVVSLQNSVPQSWVKDFMRSQGKRLKF---------QMNLCASIDGIVNNLST-PFNKL 187
+RV + + + ++ + DF + G ++ + + L A G + T PF L
Sbjct: 29 VRVYNWSDYIDETILADFTKETGIKVIYDVFDSNEMLETKLLAGGSGYDVVVPTGPF--L 86
Query: 188 SFAIKKRFIEPIAEAEDQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIGY 247
+ I+ + + + D+ LS+ W V S + DP G +A Y WGT IGY
Sbjct: 87 ARQIQAKVFQKL----DKSKLPNLSNLWPVV--SERLAKYDP-GNQYAVNYMWGTTGIGY 139
Query: 248 KKSKFQNH-NLAPIEDWKDPWWPELAGR-----ISMVNSPREVIV--------------- 286
K + PI+ W + PE A + I+++++ E
Sbjct: 140 NVDKVKAALGNVPIDSWSVLFKPENAAKLKSCGINILDASDETFAIALNYLGKNPDSKDT 199
Query: 287 ----AGGKIAVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS--- 339
AGG + + + V+ F+S+ Y+ GD + +GWS DVL A R
Sbjct: 200 KDLEAGGAVYNK-----IRKSVKTFNSSAYIDELANGDSCITIGWSGDVLQAKTRAEEAK 254
Query: 340 ---NVAVVVPKSGASLWADLWAIPAASR 364
N+ ++PK G +W D AIPA ++
Sbjct: 255 NGVNIEFIIPKEGTYMWFDNLAIPADAK 282
>gi|17986694|ref|NP_539328.1| putrescine-binding periplasmic protein [Brucella melitensis bv. 1
str. 16M]
gi|148559615|ref|YP_001259475.1| putative spermidine/putrescine ABC transporter periplasmic
spermidine/putrescine-binding protein [Brucella ovis
ATCC 25840]
gi|163843860|ref|YP_001628264.1| hypothetical protein BSUIS_A1668 [Brucella suis ATCC 23445]
gi|225853084|ref|YP_002733317.1| hypothetical protein BMEA_A1665 [Brucella melitensis ATCC 23457]
gi|256370025|ref|YP_003107536.1| spermidine/putrescine ABC transporter substrate-binding protein
[Brucella microti CCM 4915]
gi|260884340|ref|ZP_05895954.1| extracellular solute-binding protein [Brucella abortus bv. 9 str.
C68]
gi|261214589|ref|ZP_05928870.1| extracellular solute-binding protein family 1 [Brucella abortus bv.
3 str. Tulya]
gi|261222745|ref|ZP_05937026.1| extracellular solute-binding protein [Brucella ceti B1/94]
gi|261315771|ref|ZP_05954968.1| extracellular solute-binding protein family 1 [Brucella
pinnipedialis M163/99/10]
gi|261318214|ref|ZP_05957411.1| extracellular solute-binding protein family 1 [Brucella
pinnipedialis B2/94]
gi|261325666|ref|ZP_05964863.1| extracellular solute-binding protein [Brucella neotomae 5K33]
gi|261752893|ref|ZP_05996602.1| extracellular solute-binding protein family 1 [Brucella suis bv. 5
str. 513]
gi|265989246|ref|ZP_06101803.1| extracellular solute-binding protein family 1 [Brucella
pinnipedialis M292/94/1]
gi|265991659|ref|ZP_06104216.1| extracellular solute-binding protein family 1 [Brucella melitensis
bv. 1 str. Rev.1]
gi|265998707|ref|ZP_06111264.1| extracellular solute-binding protein family 1 [Brucella ceti
M490/95/1]
gi|340791218|ref|YP_004756683.1| spermidine/putrescine ABC transporter periplasmic
spermidine/putrescine-binding protein [Brucella
pinnipedialis B2/94]
gi|384409079|ref|YP_005597700.1| extracellular solute-binding protein family 1 [Brucella melitensis
M28]
gi|17982315|gb|AAL51592.1| putrescine-binding periplasmic protein [Brucella melitensis bv. 1
str. 16M]
gi|148370872|gb|ABQ60851.1| putative spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Brucella ovis
ATCC 25840]
gi|163674583|gb|ABY38694.1| Hypothetical protein BSUIS_A1668 [Brucella suis ATCC 23445]
gi|225641449|gb|ACO01363.1| Hypothetical protein, conserved [Brucella melitensis ATCC 23457]
gi|256000188|gb|ACU48587.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein, putative
[Brucella microti CCM 4915]
gi|260873868|gb|EEX80937.1| extracellular solute-binding protein [Brucella abortus bv. 9 str.
C68]
gi|260916196|gb|EEX83057.1| extracellular solute-binding protein family 1 [Brucella abortus bv.
3 str. Tulya]
gi|260921329|gb|EEX87982.1| extracellular solute-binding protein [Brucella ceti B1/94]
gi|261297437|gb|EEY00934.1| extracellular solute-binding protein family 1 [Brucella
pinnipedialis B2/94]
gi|261301646|gb|EEY05143.1| extracellular solute-binding protein [Brucella neotomae 5K33]
gi|261304797|gb|EEY08294.1| extracellular solute-binding protein family 1 [Brucella
pinnipedialis M163/99/10]
gi|261742646|gb|EEY30572.1| extracellular solute-binding protein family 1 [Brucella suis bv. 5
str. 513]
gi|262553331|gb|EEZ09165.1| extracellular solute-binding protein family 1 [Brucella ceti
M490/95/1]
gi|263002443|gb|EEZ15018.1| extracellular solute-binding protein family 1 [Brucella melitensis
bv. 1 str. Rev.1]
gi|264661443|gb|EEZ31704.1| extracellular solute-binding protein family 1 [Brucella
pinnipedialis M292/94/1]
gi|326409626|gb|ADZ66691.1| extracellular solute-binding protein family 1 [Brucella melitensis
M28]
gi|340559677|gb|AEK54915.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Brucella
pinnipedialis B2/94]
Length = 367
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 112/270 (41%), Gaps = 42/270 (15%)
Query: 131 TYALTVPLRVVSLQN---SVPQSWVKDFMRSQGKRLKFQMNLCASI-------DGIVNNL 180
T++ RVV++ N + S +KDF + G ++ + + I G +L
Sbjct: 21 TFSAGAQERVVNIYNWSDYIDDSILKDFTKETGIKVVYDVYDSNEILETKLLAGGSGYDL 80
Query: 181 STPFNKLSFAIKKRFIEPIAEAEDQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRW 240
P + + ++ + D+D L + W S A DP G ++ Y W
Sbjct: 81 VVPSGEF---LGRQIPAGVFLKLDKDKLPNLKNMWDEI--STRAATYDP-GNEYSVNYMW 134
Query: 241 GTMAIGYKKSKFQNH-NLAPIEDWKDPWWPELAGR-----ISMVNSPREVIVAG------ 288
GT IGY K+K + I+ W + PE + I +++S E++
Sbjct: 135 GTTGIGYNKAKIKEALGTDTIDSWDVLFDPEKTAKLKDCGIYLLDSASEMLRPALNYLGL 194
Query: 289 -------GKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS- 339
+ Q+L L + +R F S+ Y+ A GD+ +AVG+S D+ A R
Sbjct: 195 DPNSPSPDDLQKAQDLYLKIRPNIRKFHSSEYINALANGDICMAVGYSGDIFQARDRAEK 254
Query: 340 -----NVAVVVPKSGASLWADLWAIPAASR 364
+ +PK GA +W D AIPA ++
Sbjct: 255 AKQGVEIGYSIPKEGALIWFDQMAIPADAK 284
>gi|261219731|ref|ZP_05934012.1| extracellular solute-binding protein family 1 [Brucella ceti
M13/05/1]
gi|261322621|ref|ZP_05961818.1| extracellular solute-binding protein family 1 [Brucella ceti
M644/93/1]
gi|260924820|gb|EEX91388.1| extracellular solute-binding protein family 1 [Brucella ceti
M13/05/1]
gi|261295311|gb|EEX98807.1| extracellular solute-binding protein family 1 [Brucella ceti
M644/93/1]
Length = 367
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 112/270 (41%), Gaps = 42/270 (15%)
Query: 131 TYALTVPLRVVSLQN---SVPQSWVKDFMRSQGKRLKFQMNLCASI-------DGIVNNL 180
T++ RVV++ N + S +KDF + G ++ + + I G +L
Sbjct: 21 TFSAGAQERVVNIYNWSDYIDDSILKDFTKETGIKVVYDVYDSNEILETKLLAGGSGYDL 80
Query: 181 STPFNKLSFAIKKRFIEPIAEAEDQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRW 240
P + + ++ + D+D L + W S A DP G ++ Y W
Sbjct: 81 VVPSGEF---LGRQIPAGVFLKLDKDKLPNLKNMWDEI--STRAATYDP-GNEYSVNYMW 134
Query: 241 GTMAIGYKKSKFQNH-NLAPIEDWKDPWWPELAGR-----ISMVNSPREVIVAG------ 288
GT IGY K+K + I+ W + PE + I +++S E++
Sbjct: 135 GTTGIGYNKAKIKEALGTDTIDSWDVLFDPEKTAKLKDCGIYLLDSASEMLRPALNYLGL 194
Query: 289 -------GKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS- 339
+ Q+L L + +R F S+ Y+ A GD+ +AVG+S D+ A R
Sbjct: 195 DPNSPSPDDLQKAQDLYLKIRPNIRKFHSSEYINALANGDICMAVGYSGDIFQARDRAEK 254
Query: 340 -----NVAVVVPKSGASLWADLWAIPAASR 364
+ +PK GA +W D AIPA ++
Sbjct: 255 AKQGVEIGYSIPKEGALIWFDQMAIPADAK 284
>gi|359781792|ref|ZP_09285015.1| polyamine transport protein [Pseudomonas psychrotolerans L19]
gi|359370162|gb|EHK70730.1| polyamine transport protein [Pseudomonas psychrotolerans L19]
Length = 365
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 77/162 (47%), Gaps = 27/162 (16%)
Query: 226 EIDPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPE----LAG-RISMV 278
E+ G +A PY WGT+ IGY +K + + AP++ W + PE L G ++++
Sbjct: 117 EVSDPGNQYAIPYLWGTIGIGYNPAKVKAALGDNAPVDSWDLIFKPENLSKLKGCGVAVL 176
Query: 279 NSPREVIVAG-------------GKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVA 324
+SP E+I AG +I ++L L + + F S+ Y+ G+V VA
Sbjct: 177 DSPTEIIPAGLHYLGYKPDSQDPKEIKAAEDLFLKVRPYITYFHSSKYISDLANGNVCVA 236
Query: 325 VGWSSDV------LPAVKRMSNVAVVVPKSGASLWADLWAIP 360
VG+S D+ K VA +PK GA + D AIP
Sbjct: 237 VGYSGDIAQAKARAADAKNGVTVAYNIPKEGAGTFFDTMAIP 278
>gi|304393135|ref|ZP_07375063.1| putrescine-binding periplasmic protein [Ahrensia sp. R2A130]
gi|303294142|gb|EFL88514.1| putrescine-binding periplasmic protein [Ahrensia sp. R2A130]
Length = 363
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 86/186 (46%), Gaps = 28/186 (15%)
Query: 204 DQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDW 263
D+ + + W V + + DP G+ ++ Y WGT IGY Q P+ W
Sbjct: 98 DKSKLPNMKNMWDVVEKRTEV--YDP-GQKYSINYMWGTTGIGYNVKAAQERLGGPVTGW 154
Query: 264 KDPWWPELAGR-----ISMVNSPREVIVAG----GK---------IAVQQNLALLANQ-V 304
+ PE + + M+++P+E++ A GK +A + L + A + +
Sbjct: 155 DVIFDPEKLAKFKDCGVHMLDAPQEMVPAALNFLGKDPDSKSAEDLAAAEELLVKARENI 214
Query: 305 RLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWA 358
+ F+S+ Y+ A GD+ +AVGWS DV A R + + +P GA +W D A
Sbjct: 215 QKFNSSEYINALANGDICLAVGWSGDVFQARDRAAEADAGVELGYAIPTEGALMWFDQMA 274
Query: 359 IPAASR 364
IPA ++
Sbjct: 275 IPADAK 280
>gi|398968596|ref|ZP_10682419.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM30]
gi|398143680|gb|EJM32551.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM30]
Length = 362
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 70/160 (43%), Gaps = 27/160 (16%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN-HNLAPIEDWKDPWWPELAGR-----ISMVNSP 281
DP G + PY WGT IGY K + + I+ W + PE + +SM++S
Sbjct: 118 DP-GNQHSVPYLWGTNGIGYNVDKVKAVLGIDHIDSWAVLFEPENLKKLTQCGVSMMDSA 176
Query: 282 REVIVA--------------GGKIAVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGW 327
EV A ++ L + + F S+ Y+ GD+ VA G+
Sbjct: 177 DEVFPAILNYMGMDPRSENPEDYKKAEEKLLSIRPYITYFHSSKYVSDLANGDICVAFGY 236
Query: 328 SSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPA 361
S DV A R N+A +PK GA+LW DL AIPA
Sbjct: 237 SGDVFQAANRAKEAKNGVNIAYAIPKEGANLWFDLLAIPA 276
>gi|384211966|ref|YP_005601048.1| hypothetical protein [Brucella melitensis M5-90]
gi|384445637|ref|YP_005604356.1| hypothetical protein [Brucella melitensis NI]
gi|326539329|gb|ADZ87544.1| conserved hypothetical protein [Brucella melitensis M5-90]
gi|349743626|gb|AEQ09169.1| hypothetical protein BMNI_I1550 [Brucella melitensis NI]
Length = 368
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 112/270 (41%), Gaps = 42/270 (15%)
Query: 131 TYALTVPLRVVSLQN---SVPQSWVKDFMRSQGKRLKFQMNLCASI-------DGIVNNL 180
T++ RVV++ N + S +KDF + G ++ + + I G +L
Sbjct: 22 TFSAGAQERVVNIYNWSDYIDDSILKDFTKETGIKVVYDVYDSNEILETKLLAGGSGYDL 81
Query: 181 STPFNKLSFAIKKRFIEPIAEAEDQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRW 240
P + + ++ + D+D L + W S A DP G ++ Y W
Sbjct: 82 VVPSGEF---LGRQIPAGVFLKLDKDKLPNLKNMWDEI--STRAATYDP-GNEYSVNYMW 135
Query: 241 GTMAIGYKKSKFQNH-NLAPIEDWKDPWWPELAGR-----ISMVNSPREVIVAG------ 288
GT IGY K+K + I+ W + PE + I +++S E++
Sbjct: 136 GTTGIGYNKAKIKEALGTDTIDSWDVLFDPEKTAKLKDCGIYLLDSASEMLRPALNYLGL 195
Query: 289 -------GKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS- 339
+ Q+L L + +R F S+ Y+ A GD+ +AVG+S D+ A R
Sbjct: 196 DPNSPSPDDLQKAQDLYLKIRPNIRKFHSSEYINALANGDICMAVGYSGDIFQARDRAEK 255
Query: 340 -----NVAVVVPKSGASLWADLWAIPAASR 364
+ +PK GA +W D AIPA ++
Sbjct: 256 AKQGVEIGYSIPKEGALIWFDQMAIPADAK 285
>gi|220934438|ref|YP_002513337.1| transcription factor jumonji, JmjC [Thioalkalivibrio sulfidophilus
HL-EbGr7]
gi|219995748|gb|ACL72350.1| transcription factor jumonji, JmjC [Thioalkalivibrio sulfidophilus
HL-EbGr7]
Length = 366
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 93/230 (40%), Gaps = 46/230 (20%)
Query: 227 IDPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGRISMVN----- 279
+DP G + PY WGT IGY ++ A ++ W + PE+AG++S
Sbjct: 120 VDP-GNRFTVPYMWGTTGIGYNVAQVAAILGEEAEVDSWSLIFDPEIAGKLSACGIAVLD 178
Query: 280 ----SPREVIVAGGK---------IAVQQNLALLANQ-VRLFDSTHYLKAFGIGDVWVAV 325
+ ++ GK I NL + +R F ++ Y+ GD+ VA
Sbjct: 179 DEGEALAAALLYLGKDPNTTDPADIEEAANLFMQVRPFIRYFHASRYINDLANGDICVAH 238
Query: 326 GWSSDVLPAVKRMSNVA------VVVPKSGASLWADLWAIPAASRLETKQIGGQVRGPSP 379
G+S DV+ A R V ++P+ GA LW DL AIPA + P+P
Sbjct: 239 GYSGDVIQARDRAEEVGRGVEIDYIIPREGAVLWFDLMAIPADA-------------PNP 285
Query: 380 L-IHQWIEFCLQTARALPFKQEVIPGASPSALESTLVKLPEELLKGKPSV 428
H +I F +Q EV + A L +E ++ P V
Sbjct: 286 GNAHAFINFLMQPENIAEITNEVAYANANRA----ATDLVDEEIRNDPGV 331
>gi|398998348|ref|ZP_10701126.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM21]
gi|398120775|gb|EJM10428.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM21]
Length = 362
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 75/180 (41%), Gaps = 32/180 (17%)
Query: 208 FKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIGYKKSKF-QNHNLAPIEDWKDP 266
FK L K L ND P+ + PY WGT IGY K Q + I+ W
Sbjct: 103 FKNLDPKLLALLEKND-----PQNA-HSVPYLWGTNGIGYNVDKVKQVLGIDRIDSWAVL 156
Query: 267 WWPELAGR-----ISMVNSPREVIVAGGKIA--------------VQQNLALLANQVRLF 307
+ PE + +SM++S EV A + L + + F
Sbjct: 157 FEPENIKKLSQCGVSMMDSADEVFPAMLNYMGMDPRSENPEDFKKAEAKLLAIRPYITYF 216
Query: 308 DSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPA 361
S+ Y+ GD+ VA G+S DV A R N+A +PK G++LW DL A+PA
Sbjct: 217 HSSKYVSDLANGDICVAFGYSGDVFQAANRAKEAKNGVNIAYAIPKEGSNLWFDLLAVPA 276
>gi|395499287|ref|ZP_10430866.1| putrescine ABC transporter substrate-binding protein [Pseudomonas
sp. PAMC 25886]
gi|395793876|ref|ZP_10473221.1| putrescine ABC transporter substrate-binding protein [Pseudomonas
sp. Ag1]
gi|421143690|ref|ZP_15603626.1| extracellular solute-binding protein, family 1 [Pseudomonas
fluorescens BBc6R8]
gi|395341989|gb|EJF73785.1| putrescine ABC transporter substrate-binding protein [Pseudomonas
sp. Ag1]
gi|404505108|gb|EKA19142.1| extracellular solute-binding protein, family 1 [Pseudomonas
fluorescens BBc6R8]
Length = 362
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 76/180 (42%), Gaps = 32/180 (17%)
Query: 208 FKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIGYKKSKF-QNHNLAPIEDWKDP 266
FK L K L ND G + PY WGT IGY K Q + I+ W
Sbjct: 103 FKNLDPKLLKLLEKNDPGNEH------SVPYLWGTNGIGYNVDKVKQVLGIDHIDSWAVL 156
Query: 267 WWPELAGR-----ISMVNSPREVIVA----GGKIAVQQN----------LALLANQVRLF 307
+ PE + ++ ++S E+ A GK +N L L + F
Sbjct: 157 FEPENIKKLHECGVAFLDSADELFPAILNYMGKDPRSENPEDYKQAEAKLLTLRPYITYF 216
Query: 308 DSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPA 361
S+ Y+ GD+ VA G+S DV A R N+A +PK G++LW DL AIPA
Sbjct: 217 HSSKYISDLANGDICVAFGYSGDVFQAANRAKEAKNGVNIAYSIPKEGSNLWFDLLAIPA 276
>gi|115524028|ref|YP_780939.1| extracellular solute-binding protein [Rhodopseudomonas palustris
BisA53]
gi|115517975|gb|ABJ05959.1| extracellular solute-binding protein, family 1 [Rhodopseudomonas
palustris BisA53]
Length = 370
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 91/202 (45%), Gaps = 32/202 (15%)
Query: 188 SFAIKKRFIEPIAEAEDQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIGY 247
++ ++++ + + D+ L+H W+V + DP G +AA Y WGT IGY
Sbjct: 87 AYFLQRQIAANVFQKLDKTKLPNLAHAWEVVTKR--LAVYDP-GNQYAANYMWGTTGIGY 143
Query: 248 KKSKFQNHNLAP---IEDWKDPWWPELAGR-----ISMVNSPREVIVAG-GKIAVQQN-- 296
Q+ L P ++ W + PE + I M++S +++ A + + N
Sbjct: 144 NVKTIQSI-LGPGAVVDSWDIVFKPENISKFKDCGIHMLDSADDILPAALNYLGLDPNST 202
Query: 297 -----------LALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------ 339
+A + VR F S+ YL + G++ + VGWS D++ A R +
Sbjct: 203 KPADIEKAADLVAAIRPNVRKFHSSEYLNSLATGEICLVVGWSGDIMQARSRAAEAKGGV 262
Query: 340 NVAVVVPKSGASLWADLWAIPA 361
+ +PK GA ++ D AIPA
Sbjct: 263 EIGYAIPKQGAQMFFDNLAIPA 284
>gi|398844417|ref|ZP_10601481.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM84]
gi|398254503|gb|EJN39596.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM84]
Length = 312
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 69/159 (43%), Gaps = 27/159 (16%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQNH-NLAPIEDWKDPWWPELAGR-----ISMVNSP 281
DP G +A PY WGT IGY K + + I+ W + PE + ++ ++SP
Sbjct: 68 DP-GNQYAVPYLWGTNGIGYNVDKVKAALGVDHIDSWAVLFEPENLKKLKQCGVAFMDSP 126
Query: 282 REVI--------------VAGGKIAVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGW 327
E+ AG + L L + F S+ Y+ GDV VA G+
Sbjct: 127 DELFPAILNYMGMDPRSEKAGDYAKAEARLLELRPYITYFHSSKYVSDLANGDVCVAFGY 186
Query: 328 SSDVLPAVKRM------SNVAVVVPKSGASLWADLWAIP 360
S DV A R VA +PK G++LW DL AIP
Sbjct: 187 SGDVFQAANRAIEAKNGVKVAYSIPKEGSNLWFDLLAIP 225
>gi|265995497|ref|ZP_06108054.1| extracellular solute-binding protein [Brucella melitensis bv. 3
str. Ether]
gi|262766610|gb|EEZ12399.1| extracellular solute-binding protein [Brucella melitensis bv. 3
str. Ether]
Length = 367
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 112/270 (41%), Gaps = 42/270 (15%)
Query: 131 TYALTVPLRVVSLQN---SVPQSWVKDFMRSQGKRLKFQMNLCASI-------DGIVNNL 180
T++ RVV++ N + S +KDF + G ++ + + I G +L
Sbjct: 21 TFSAGAQERVVNIYNWSDYIDDSILKDFTKETGIKVVYDVYDSNEILETKLLAGGSGYDL 80
Query: 181 STPFNKLSFAIKKRFIEPIAEAEDQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRW 240
P + + ++ + D+D L + W S A DP G ++ Y W
Sbjct: 81 VVPSGEF---LGRQIPAGVFLKLDKDKLPNLKNMWDEI--STRAATYDP-GNEYSVNYMW 134
Query: 241 GTMAIGYKKSKFQNH-NLAPIEDWKDPWWPELAGR-----ISMVNSPREVIVAG------ 288
GT IGY K+K + I+ W + PE + I +++S E++
Sbjct: 135 GTTGIGYNKAKIKEALGTDTIDSWDVLFDPEKTAKLKDCGIYLLDSASEMLRPALNYLGL 194
Query: 289 -------GKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS- 339
+ Q+L L + +R F S+ Y+ A GD+ +AVG+S D+ A R
Sbjct: 195 DPNSPSPDDLQKAQDLYLKIRPNIRKFHSSEYINALANGDICMAVGYSGDIFQARDRAEK 254
Query: 340 -----NVAVVVPKSGASLWADLWAIPAASR 364
+ +PK GA +W D AIPA ++
Sbjct: 255 AKQGVEIGYSIPKEGALIWFDQMAIPADAK 284
>gi|167033710|ref|YP_001668941.1| extracellular solute-binding protein [Pseudomonas putida GB-1]
gi|166860198|gb|ABY98605.1| extracellular solute-binding protein family 1 [Pseudomonas putida
GB-1]
Length = 362
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 69/159 (43%), Gaps = 27/159 (16%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQNH-NLAPIEDWKDPWWPELAGR-----ISMVNSP 281
DP G +A PY WGT IGY K + + I+ W + PE + ++ ++SP
Sbjct: 118 DP-GNQYAVPYLWGTNGIGYNVDKVKAALGVDHIDSWAVLFEPENLKKLKQCGVAFMDSP 176
Query: 282 REVIVA--------------GGKIAVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGW 327
E+ A G + L L + F S+ Y+ GDV VA G+
Sbjct: 177 DELFPAILNYLGMDPRSEKPGDYAKAEARLLELRPYITYFHSSKYVSDLANGDVCVAFGY 236
Query: 328 SSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIP 360
S DV A R VA +PK G++LW DL AIP
Sbjct: 237 SGDVFQAANRAVEAKNGVKVAYSIPKEGSNLWFDLLAIP 275
>gi|152988127|ref|YP_001346915.1| polyamine transport protein PotD [Pseudomonas aeruginosa PA7]
gi|150963285|gb|ABR85310.1| polyamine transport protein PotD [Pseudomonas aeruginosa PA7]
Length = 353
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 101/228 (44%), Gaps = 42/228 (18%)
Query: 219 LRSNDAGEIDP---RGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWK---DPWWPE-L 271
L++ DAG +D +G ++ PY + T +GY K++ + P DW DP E +
Sbjct: 100 LKNEDAGYLDKDFDKGNRYSVPYAFTTTLVGYNKTELDKLGIDPA-DWSVIFDPAVLEKI 158
Query: 272 AGRISMVNSPREVIVAGGKIAVQ-------------QNLALLANQV-RLFDSTHYLKAFG 317
GR+++++ P+E+ A K Q L L A F+S+ Y+K
Sbjct: 159 KGRVTVMDDPQELFGAALKYLGHSANDTDPQHWKEAQALILAAKPYWAAFNSSSYIKELT 218
Query: 318 IGDVWVAVGWSSDVL------PAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIG 371
+G++WVA G+SSD+ A R V +P+ GA L D I S
Sbjct: 219 LGNIWVAHGYSSDMYQARADAEAAGRAFKVDFALPRQGAVLAIDSMVIHKGS-------- 270
Query: 372 GQVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALESTLVKLPE 419
R P L +++I+F L A ++ G +P+A ++ PE
Sbjct: 271 ---RNPD-LAYRFIDFMLDGRNASELTNQIGTG-TPNAAAQPFIR-PE 312
>gi|317485961|ref|ZP_07944816.1| bacterial extracellular solute-binding protein [Bilophila
wadsworthia 3_1_6]
gi|316922734|gb|EFV43965.1| bacterial extracellular solute-binding protein [Bilophila
wadsworthia 3_1_6]
Length = 345
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 100/230 (43%), Gaps = 31/230 (13%)
Query: 225 GEIDP--------RGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRIS 276
G +DP +G PY WGT+ + K +++ I+ WKD PE GR+
Sbjct: 105 GNLDPASLNQPFDKGNALTIPYMWGTVGLLVNKKAV---DVSTIKSWKDLARPEFKGRVL 161
Query: 277 MVNSPREVIVAGGKI--------------AVQQNLALLANQVRLFDSTHYLKAFGIGDVW 322
+ + R+ G K A + L L VR+FD T +AF +V
Sbjct: 162 LSDDLRDTFGVGLKACGYSINSTNPDEIKAAYEWLKALKPSVRVFDVTATKQAFISEEVV 221
Query: 323 VAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGQVRGPSPLIH 382
+ W+ D A++ ++ +VP+ G +W D +AIPA + E K+ + S L+
Sbjct: 222 AGLAWNGDAFIAMQENPDLEFIVPEEGMLIWLDNFAIPAGA--EHKE--NAYKFISYLMR 277
Query: 383 -QWIEFCLQTARALPFKQEVIPGASPSALESTLVKL-PEELLKGKPSVDT 430
+ + C++ + P ES ++ L PEEL KG+ +V+
Sbjct: 278 PEVAKLCVEEFNYSTPNKAAEKILEPEYAESKVIVLDPEELAKGEVTVNV 327
>gi|146280464|ref|YP_001170617.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas stutzeri A1501]
gi|339492153|ref|YP_004712446.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas stutzeri ATCC 17588 = LMG 11199]
gi|386018709|ref|YP_005936733.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas stutzeri DSM 4166]
gi|145568669|gb|ABP77775.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas stutzeri A1501]
gi|327478681|gb|AEA81991.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas stutzeri DSM 4166]
gi|338799525|gb|AEJ03357.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas stutzeri ATCC 17588 = LMG 11199]
Length = 365
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 91/206 (44%), Gaps = 32/206 (15%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP G ++ PY WGT+ IGY K + + AP++ W + PE + ++ ++S
Sbjct: 120 DP-GNQYSIPYMWGTIGIGYNVDKVKAALGDNAPVDSWDLVFKPENIEKLKSCGVAFLDS 178
Query: 281 PREVIVAG----------GKIAVQQNLALLANQVR----LFDSTHYLKAFGIGDVWVAVG 326
P E++ A GK + L Q+R F S+ Y+ G++ VA+G
Sbjct: 179 PTEMLPAALHYLGYATDSGKADELKKAEDLFMQIRPHVAYFHSSKYISDLANGNICVAIG 238
Query: 327 WSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPA-ASRLETKQIG-GQVRGPS 378
+S D+ R NV +PK GA + D+ A+PA A +E + + P
Sbjct: 239 YSGDIYQGKSRAEEAANGVNVGYKIPKEGAGSFFDMLAVPADAKNVENAHVFLNYLMKPD 298
Query: 379 PL--IHQWIEFCLQTARALPFKQEVI 402
+ I +++F A A P E I
Sbjct: 299 VMASITNYVQFPNGNAAATPLLDEAI 324
>gi|148547784|ref|YP_001267886.1| extracellular solute-binding protein [Pseudomonas putida F1]
gi|395449383|ref|YP_006389636.1| extracellular solute-binding protein [Pseudomonas putida ND6]
gi|421521263|ref|ZP_15967922.1| extracellular solute-binding protein [Pseudomonas putida LS46]
gi|148511842|gb|ABQ78702.1| extracellular solute-binding protein, family 1 [Pseudomonas putida
F1]
gi|388563380|gb|AFK72521.1| extracellular solute-binding protein [Pseudomonas putida ND6]
gi|402755203|gb|EJX15678.1| extracellular solute-binding protein [Pseudomonas putida LS46]
Length = 362
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 69/159 (43%), Gaps = 27/159 (16%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQNH-NLAPIEDWKDPWWPELAGR-----ISMVNSP 281
DP G +A PY WGT IGY K + + I+ W + PE + ++ ++SP
Sbjct: 118 DP-GNQYAVPYLWGTNGIGYNVDKVKAALGVDHIDSWAVLFEPENLKKLKQCGVAFMDSP 176
Query: 282 REVIVA--------------GGKIAVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGW 327
E+ A G + L L + F S+ Y+ GDV VA G+
Sbjct: 177 DELFPAVLNYLGMDPRSEKPGDYAKAEARLLELRPYITYFHSSKYVSDLANGDVCVAFGY 236
Query: 328 SSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIP 360
S DV A R VA +PK G++LW DL AIP
Sbjct: 237 SGDVFQAANRAVEAKNGVKVAYSIPKEGSNLWFDLLAIP 275
>gi|421165155|ref|ZP_15623497.1| polyamine transport protein [Pseudomonas aeruginosa ATCC 700888]
gi|404542820|gb|EKA52128.1| polyamine transport protein [Pseudomonas aeruginosa ATCC 700888]
Length = 365
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 74/165 (44%), Gaps = 26/165 (15%)
Query: 226 EIDPRGKIWAAPYRWGTMAIGYKKSKFQN-HNLAPIEDWKDPWWPELAGR-----ISMVN 279
E+ G +A PY WGT IGY +K + PI+ W + PE + ++ ++
Sbjct: 118 EVSDPGNQYAVPYLWGTNGIGYNVAKVKEVLGDQPIDSWAILFEPENMKKLAKCGVAFMD 177
Query: 280 SPREVIVAGGKI--------------AVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAV 325
S E++ A ++ L + V F S+ Y+ G++ VA
Sbjct: 178 SGDEMLPAALNYLGLDPNTHDPKDYKKAEEVLTKVRPYVSYFHSSKYISDLANGNICVAF 237
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
G+S DV A R ++ V+PK GA+LW DL AIPA ++
Sbjct: 238 GYSGDVFQAAARAEEAGKGIDIQYVIPKEGANLWFDLMAIPADAK 282
>gi|307130758|ref|YP_003882774.1| putrescine ABC transporter substrate-binding protein [Dickeya
dadantii 3937]
gi|306528287|gb|ADM98217.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Dickeya dadantii 3937]
Length = 369
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 73/167 (43%), Gaps = 29/167 (17%)
Query: 226 EIDPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMV 278
E DP G +A PY W T IGY K + AP+ W PE + +S +
Sbjct: 121 EHDP-GHKYAVPYLWATTGIGYNVDKVKAVLGKDAPVNSWDLVLKPENLEKLKSCGVSFL 179
Query: 279 NSPREVIVA----GGKIAVQQN-----------LALLANQVRLFDSTHYLKAFGIGDVWV 323
++P E+ GK N L L VR F S+ Y+ GD+ V
Sbjct: 180 DAPAEIYATVLNYQGKNPNSTNEADYTKDATDLLLKLRPSVRYFHSSQYINDLANGDICV 239
Query: 324 AVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
A+GW+ DV+ A R N++ +PK GA + D++AIP ++
Sbjct: 240 AIGWAGDVMQAANRAKEAKNGVNISYSIPKEGALAFFDVFAIPKDAK 286
>gi|260755322|ref|ZP_05867670.1| extracellular solute-binding protein family 1 [Brucella abortus bv.
6 str. 870]
gi|260675430|gb|EEX62251.1| extracellular solute-binding protein family 1 [Brucella abortus bv.
6 str. 870]
Length = 367
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 112/270 (41%), Gaps = 42/270 (15%)
Query: 131 TYALTVPLRVVSLQN---SVPQSWVKDFMRSQGKRLKFQMNLCASI-------DGIVNNL 180
T++ RVV++ N + S +KDF + G ++ + + I G +L
Sbjct: 21 TFSAGAQERVVNIYNWSDYIDDSILKDFTKETGIKVVYDVYDSNEILETKLLAGGSGYDL 80
Query: 181 STPFNKLSFAIKKRFIEPIAEAEDQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRW 240
P + + ++ + D+D L + W S A DP G ++ Y W
Sbjct: 81 VVPSGEF---LGRQIPAGVFLKLDKDKLPNLKNMWDEI--STRAATYDP-GNEYSVNYMW 134
Query: 241 GTMAIGYKKSKFQNH-NLAPIEDWKDPWWPELAGR-----ISMVNSPREVIVAG------ 288
GT IGY K+K + I+ W + PE + I +++S E++
Sbjct: 135 GTAGIGYNKAKIKEALGTDTIDSWDVLFDPEKTAKLKDCGIYLLDSASEMLRPALNYLGL 194
Query: 289 -------GKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS- 339
+ Q+L L + +R F S+ Y+ A GD+ +AVG+S D+ A R
Sbjct: 195 DPNSPSPDDLQKAQDLYLKIRPNIRKFHSSEYINALANGDICMAVGYSGDIFQARDRAEK 254
Query: 340 -----NVAVVVPKSGASLWADLWAIPAASR 364
+ +PK GA +W D AIPA ++
Sbjct: 255 AKQGVEIGYSIPKEGALIWFDQMAIPADAK 284
>gi|91794381|ref|YP_564032.1| extracellular solute-binding protein [Shewanella denitrificans
OS217]
gi|91716383|gb|ABE56309.1| extracellular solute-binding protein, family 1 [Shewanella
denitrificans OS217]
Length = 366
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 75/161 (46%), Gaps = 28/161 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP G +A PY WGT IGY + K + + AP++ + + P+ + + I+M++S
Sbjct: 121 DP-GNKFAVPYLWGTNGIGYNEGKVKALLGDDAPVDSLELIFNPKYSSKLAECGIAMLDS 179
Query: 281 -----PREVIVAG-----GKIAVQQNLALLANQVR----LFDSTHYLKAFGIGDVWVAVG 326
P +I G I Q A L +R F S+ Y+ G++ VA G
Sbjct: 180 SEDMMPEALIYLGLNPNSKNIGDYQKAADLMMTIRPYITYFHSSRYISDLANGNICVAYG 239
Query: 327 WSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIPA 361
+S DV A R + +PK GA+LW D+ AIPA
Sbjct: 240 FSGDVFQAAARADEAKNGHKIGYAIPKEGANLWFDMLAIPA 280
>gi|397693845|ref|YP_006531725.1| extracellular solute-binding protein [Pseudomonas putida DOT-T1E]
gi|397330575|gb|AFO46934.1| extracellular solute-binding protein [Pseudomonas putida DOT-T1E]
Length = 362
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 69/159 (43%), Gaps = 27/159 (16%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQNH-NLAPIEDWKDPWWPELAGR-----ISMVNSP 281
DP G +A PY WGT IGY K + + I+ W + PE + ++ ++SP
Sbjct: 118 DP-GNQYAVPYLWGTNGIGYNVDKVKAALGVDHIDSWAVLFEPENLKKLKQCGVAFMDSP 176
Query: 282 REVIVA--------------GGKIAVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGW 327
E+ A G + L L + F S+ Y+ GDV VA G+
Sbjct: 177 DELFPAVLNYLGMDPRSEKPGDYAKAEARLLELRPYITYFHSSKYVSDLANGDVCVAFGY 236
Query: 328 SSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIP 360
S DV A R VA +PK G++LW DL AIP
Sbjct: 237 SGDVFQAANRAVEAKNGVKVAYSIPKEGSNLWFDLLAIP 275
>gi|386056365|ref|YP_005972887.1| polyamine transport protein [Pseudomonas aeruginosa M18]
gi|392981709|ref|YP_006480296.1| polyamine transport protein [Pseudomonas aeruginosa DK2]
gi|419756621|ref|ZP_14282967.1| polyamine transport protein [Pseudomonas aeruginosa PADK2_CF510]
gi|421151364|ref|ZP_15610979.1| polyamine transport protein [Pseudomonas aeruginosa ATCC 14886]
gi|347302671|gb|AEO72785.1| polyamine transport protein [Pseudomonas aeruginosa M18]
gi|384396994|gb|EIE43411.1| polyamine transport protein [Pseudomonas aeruginosa PADK2_CF510]
gi|392317214|gb|AFM62594.1| polyamine transport protein [Pseudomonas aeruginosa DK2]
gi|404527401|gb|EKA37562.1| polyamine transport protein [Pseudomonas aeruginosa ATCC 14886]
gi|453045675|gb|EME93393.1| polyamine transport protein [Pseudomonas aeruginosa PA21_ST175]
Length = 365
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 74/165 (44%), Gaps = 26/165 (15%)
Query: 226 EIDPRGKIWAAPYRWGTMAIGYKKSKFQN-HNLAPIEDWKDPWWPELAGR-----ISMVN 279
E+ G +A PY WGT IGY +K + PI+ W + PE + ++ ++
Sbjct: 118 EVSDPGNQYAVPYLWGTNGIGYNVAKVKEVLGDQPIDSWAILFEPENMKKLAKCGVAFMD 177
Query: 280 SPREVIVAGGKI--------------AVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAV 325
S E++ A ++ L + V F S+ Y+ G++ VA
Sbjct: 178 SGDEMLPAALNYLGLDPNTHDPKDYKKAEEVLTKVRPYVSYFHSSKYISDLANGNICVAF 237
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
G+S DV A R ++ V+PK GA+LW DL AIPA ++
Sbjct: 238 GYSGDVFQAAARAEEAGKGIDIQYVIPKEGANLWFDLMAIPADAK 282
>gi|254237466|ref|ZP_04930789.1| polyamine transport protein [Pseudomonas aeruginosa C3719]
gi|126169397|gb|EAZ54908.1| polyamine transport protein [Pseudomonas aeruginosa C3719]
Length = 365
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 74/165 (44%), Gaps = 26/165 (15%)
Query: 226 EIDPRGKIWAAPYRWGTMAIGYKKSKFQN-HNLAPIEDWKDPWWPELAGR-----ISMVN 279
E+ G +A PY WGT IGY +K + PI+ W + PE + ++ ++
Sbjct: 118 EVSDPGNQYAVPYLWGTNGIGYNVAKVKEVLGDQPIDSWAILFEPENMKKLAKCGVAFMD 177
Query: 280 SPREVIVAGGKI--------------AVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAV 325
S E++ A ++ L + V F S+ Y+ G++ VA
Sbjct: 178 SGDEMLPAALNYLGLDPNTHDPKDYKKAEEVLTKVRPYVSYFHSSKYISDLANGNICVAF 237
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
G+S DV A R ++ V+PK GA+LW DL AIPA ++
Sbjct: 238 GYSGDVFQAAARAEEAGKGIDIQYVIPKEGANLWFDLMAIPADAK 282
>gi|15595498|ref|NP_248992.1| polyamine transporter [Pseudomonas aeruginosa PAO1]
gi|107099282|ref|ZP_01363200.1| hypothetical protein PaerPA_01000294 [Pseudomonas aeruginosa PACS2]
gi|116054027|ref|YP_788470.1| polyamine transport protein [Pseudomonas aeruginosa UCBPP-PA14]
gi|218889041|ref|YP_002437905.1| polyamine transport protein [Pseudomonas aeruginosa LESB58]
gi|254243398|ref|ZP_04936720.1| polyamine transport protein [Pseudomonas aeruginosa 2192]
gi|296386794|ref|ZP_06876293.1| polyamine transport protein [Pseudomonas aeruginosa PAb1]
gi|313112088|ref|ZP_07797872.1| polyamine transport protein [Pseudomonas aeruginosa 39016]
gi|355646504|ref|ZP_09054459.1| hypothetical protein HMPREF1030_03545 [Pseudomonas sp. 2_1_26]
gi|386063282|ref|YP_005978586.1| polyamine transport protein [Pseudomonas aeruginosa NCGM2.S1]
gi|416878351|ref|ZP_11920375.1| polyamine transport protein [Pseudomonas aeruginosa 152504]
gi|418584347|ref|ZP_13148409.1| polyamine transport protein [Pseudomonas aeruginosa MPAO1/P1]
gi|418591159|ref|ZP_13155060.1| polyamine transport protein [Pseudomonas aeruginosa MPAO1/P2]
gi|420136865|ref|ZP_14644878.1| polyamine transport protein [Pseudomonas aeruginosa CIG1]
gi|421157298|ref|ZP_15616680.1| polyamine transport protein [Pseudomonas aeruginosa ATCC 25324]
gi|421172021|ref|ZP_15629801.1| polyamine transport protein [Pseudomonas aeruginosa CI27]
gi|421178211|ref|ZP_15635826.1| polyamine transport protein [Pseudomonas aeruginosa E2]
gi|421514913|ref|ZP_15961599.1| polyamine transport protein [Pseudomonas aeruginosa PAO579]
gi|424943286|ref|ZP_18359049.1| polyamine transport protein [Pseudomonas aeruginosa NCMG1179]
gi|451984064|ref|ZP_21932323.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Pseudomonas aeruginosa 18A]
gi|9946146|gb|AAG03690.1|AE004468_2 polyamine transport protein [Pseudomonas aeruginosa PAO1]
gi|115589248|gb|ABJ15263.1| polyamine transport protein [Pseudomonas aeruginosa UCBPP-PA14]
gi|126196776|gb|EAZ60839.1| polyamine transport protein [Pseudomonas aeruginosa 2192]
gi|218769264|emb|CAW25024.1| polyamine transport protein [Pseudomonas aeruginosa LESB58]
gi|310884374|gb|EFQ42968.1| polyamine transport protein [Pseudomonas aeruginosa 39016]
gi|334838401|gb|EGM17123.1| polyamine transport protein [Pseudomonas aeruginosa 152504]
gi|346059732|dbj|GAA19615.1| polyamine transport protein [Pseudomonas aeruginosa NCMG1179]
gi|348031841|dbj|BAK87201.1| polyamine transport protein [Pseudomonas aeruginosa NCGM2.S1]
gi|354828463|gb|EHF12583.1| hypothetical protein HMPREF1030_03545 [Pseudomonas sp. 2_1_26]
gi|375045845|gb|EHS38418.1| polyamine transport protein [Pseudomonas aeruginosa MPAO1/P1]
gi|375050052|gb|EHS42538.1| polyamine transport protein [Pseudomonas aeruginosa MPAO1/P2]
gi|403250363|gb|EJY63806.1| polyamine transport protein [Pseudomonas aeruginosa CIG1]
gi|404348641|gb|EJZ74978.1| polyamine transport protein [Pseudomonas aeruginosa PAO579]
gi|404538248|gb|EKA47791.1| polyamine transport protein [Pseudomonas aeruginosa CI27]
gi|404548541|gb|EKA57488.1| polyamine transport protein [Pseudomonas aeruginosa E2]
gi|404550731|gb|EKA59455.1| polyamine transport protein [Pseudomonas aeruginosa ATCC 25324]
gi|451758300|emb|CCQ84846.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Pseudomonas aeruginosa 18A]
Length = 365
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 74/165 (44%), Gaps = 26/165 (15%)
Query: 226 EIDPRGKIWAAPYRWGTMAIGYKKSKFQN-HNLAPIEDWKDPWWPELAGR-----ISMVN 279
E+ G +A PY WGT IGY +K + PI+ W + PE + ++ ++
Sbjct: 118 EVSDPGNQYAVPYLWGTNGIGYNVAKVKEVLGDQPIDSWAILFEPENMKKLAKCGVAFMD 177
Query: 280 SPREVIVAGGKI--------------AVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAV 325
S E++ A ++ L + V F S+ Y+ G++ VA
Sbjct: 178 SGDEMLPAALNYLGLDPNTHDPKDYKKAEEVLTKVRPYVSYFHSSKYISDLANGNICVAF 237
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
G+S DV A R ++ V+PK GA+LW DL AIPA ++
Sbjct: 238 GYSGDVFQAAARAEEAGKGIDIQYVIPKEGANLWFDLMAIPADAK 282
>gi|398907683|ref|ZP_10654002.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM50]
gi|398171118|gb|EJM59030.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM50]
Length = 362
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 73/179 (40%), Gaps = 32/179 (17%)
Query: 209 KRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIGYKKSKF-QNHNLAPIEDWKDPW 267
K L K L ND G + PY WGT IGY K Q + I+ W +
Sbjct: 104 KNLDPKLLALLEKNDPGNEH------SVPYLWGTNGIGYNVDKVKQVLGIDRIDSWAVFF 157
Query: 268 WPELAGR-----ISMVNSPREVIVA--------------GGKIAVQQNLALLANQVRLFD 308
PE + +SM++S EV A + L + + F
Sbjct: 158 EPENLKKLSQCGVSMMDSADEVFPAVLNYMGMDPRSENPADFKKAEAKLMTIRPYITYFH 217
Query: 309 STHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPA 361
S+ Y+ GD+ VA G+S DV A R N+A +PK G++LW DL AIPA
Sbjct: 218 SSKYVSDLANGDICVAFGYSGDVFQAANRAKEAKNGVNIAYSIPKEGSNLWFDLLAIPA 276
>gi|152989077|ref|YP_001345787.1| polyamine transport protein [Pseudomonas aeruginosa PA7]
gi|452878415|ref|ZP_21955626.1| polyamine transport protein [Pseudomonas aeruginosa VRFPA01]
gi|150964235|gb|ABR86260.1| polyamine transport protein [Pseudomonas aeruginosa PA7]
gi|452184919|gb|EME11937.1| polyamine transport protein [Pseudomonas aeruginosa VRFPA01]
Length = 365
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 74/165 (44%), Gaps = 26/165 (15%)
Query: 226 EIDPRGKIWAAPYRWGTMAIGYKKSKFQN-HNLAPIEDWKDPWWPELAGR-----ISMVN 279
E+ G +A PY WGT IGY +K + PI+ W + PE + ++ ++
Sbjct: 118 EVSDPGNQYAVPYLWGTNGIGYNVAKVKEVLGDQPIDSWAILFEPENMKKLAKCGVAFMD 177
Query: 280 SPREVIVAGGKI--------------AVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAV 325
S E++ A ++ L + V F S+ Y+ G++ VA
Sbjct: 178 SGDEMLPAALNYLGLDPNTHDPKEYKKAEEVLTKVRPYVSYFHSSKYISDLANGNICVAF 237
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
G+S DV A R ++ V+PK GA+LW DL AIPA ++
Sbjct: 238 GYSGDVFQAAARAEEAGKGIDIQYVIPKEGANLWFDLMAIPADAK 282
>gi|317047520|ref|YP_004115168.1| family 1 extracellular solute-binding protein [Pantoea sp. At-9b]
gi|316949137|gb|ADU68612.1| extracellular solute-binding protein family 1 [Pantoea sp. At-9b]
Length = 369
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 74/165 (44%), Gaps = 29/165 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP G +A PY WGT IGY K + AP++ W PE + +S +++
Sbjct: 123 DP-GNKYAIPYLWGTTGIGYNVDKVKAVLGKDAPVDSWDLVLKPENLEKLKSCGVSFLDA 181
Query: 281 PREVIVAG----GKI-----------AVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAV 325
P E+ GK A L L +R F S+ Y+ G++ VA+
Sbjct: 182 PEEIFATVLNYLGKDPNSSDPKDYSGAATDLLLKLRPSIRYFHSSQYINDLANGNICVAI 241
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
GWS D+L A R + N+A VPK GA + D+ AIP ++
Sbjct: 242 GWSGDILQAKDRAAQAKNGVNLAYSVPKQGALAFFDMMAIPKDAK 286
>gi|237809505|ref|YP_002893945.1| extracellular solute-binding protein [Tolumonas auensis DSM 9187]
gi|237501766|gb|ACQ94359.1| extracellular solute-binding protein family 1 [Tolumonas auensis
DSM 9187]
Length = 366
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 82/180 (45%), Gaps = 36/180 (20%)
Query: 219 LRSNDAG------EIDPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAP---IEDWKDPWWP 269
L++ DAG E DP + PY GT IG+ K + P ++ W + P
Sbjct: 106 LKNMDAGIMKLLAEKDPDNA-HSVPYLGGTTGIGFNPQKVA-AVMGPDFKLDSWDAVFKP 163
Query: 270 ELAGR-----ISMVNSPREVIVAG----GKIAVQQN----------LALLANQVRLFDST 310
E + +S +N+P E++ GK N L+ L + F S+
Sbjct: 164 ENLAKLKKCGVSFLNAPTEIMATALHYMGKDPNSTNPADYREAGKLLSTLRPHISYFHSS 223
Query: 311 HYLKAFGIGDVWVAVGWSSDVLPAVKRM----SNVAV--VVPKSGASLWADLWAIPAASR 364
Y+ GD+ VA+GWS DV+ A R +NV V V+PK GA ++ D+ AIPA S+
Sbjct: 224 QYINDLANGDICVAIGWSGDVMQAAARAEEAKNNVTVDYVIPKEGALVFYDMLAIPADSK 283
>gi|344343930|ref|ZP_08774796.1| extracellular solute-binding protein family 1 [Marichromatium
purpuratum 984]
gi|343804541|gb|EGV22441.1| extracellular solute-binding protein family 1 [Marichromatium
purpuratum 984]
Length = 369
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 78/163 (47%), Gaps = 28/163 (17%)
Query: 225 GEIDPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISM 277
EIDP PY WGT +G ++K + + P++ W + P++A R I++
Sbjct: 121 AEIDPDNA-HLVPYMWGTSGLGINRAKVREILGDEIPLDTWALVFDPQIAARLAGCGIAL 179
Query: 278 VNSPREVIVAG----GKI----------AVQQNLALLANQVRLFDSTHYLKAFGIGDVWV 323
++ P EV A GK A + + + +R F S+ Y+ GD+ +
Sbjct: 180 LDDPTEVFSAALAYLGKDPNSLERADLDAAAELIKGVYPHIRYFHSSQYISDLANGDLCI 239
Query: 324 AVGWSSDVLPAVKRMS----NVAVV--VPKSGASLWADLWAIP 360
A G+S DVL A +R V V+ +P+ GA++W D+ AIP
Sbjct: 240 AHGYSGDVLQAQERADEAGKGVEVIYRIPREGAAMWTDVMAIP 282
>gi|253575509|ref|ZP_04852846.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Paenibacillus sp.
oral taxon 786 str. D14]
gi|251845156|gb|EES73167.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Paenibacillus sp.
oral taxon 786 str. D14]
Length = 335
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 70/151 (46%), Gaps = 19/151 (12%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVI-- 285
DP G ++ Y G I Y K ++ I+ W+D W PE G++ +++ REVI
Sbjct: 107 DP-GNKYSIVYTSGVTGIAYNKKYVKDE----IDSWEDLWNPEYKGKVILLDDNREVIGM 161
Query: 286 -----------VAGGKIAVQ-QNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLP 333
G+I ++L L V FD+ + + + W+A WS D
Sbjct: 162 ALKKNGYSNSSTDEGEITTAVEDLKKLLPSVLAFDTDNIKQKMIQEEGWIATVWSGDASY 221
Query: 334 AVKRMSNVAVVVPKSGASLWADLWAIPAASR 364
+ +VA VVPK G ++W+D +AIP S+
Sbjct: 222 IAQDNPDVAYVVPKEGGTIWSDNYAIPKDSK 252
>gi|414172764|ref|ZP_11427675.1| hypothetical protein HMPREF9695_01321 [Afipia broomeae ATCC 49717]
gi|410894439|gb|EKS42229.1| hypothetical protein HMPREF9695_01321 [Afipia broomeae ATCC 49717]
Length = 370
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 76/164 (46%), Gaps = 28/164 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP G +AA Y WGT IGY K Q+ A I+ W + PE + I M++S
Sbjct: 125 DP-GNAFAANYMWGTTGIGYNVKKVQDILGADARIDSWSAVFVPENLAKFKDCGIHMLDS 183
Query: 281 PREVIVAG----------GKIAVQQNLALLANQVR----LFDSTHYLKAFGIGDVWVAVG 326
+++ A K A + A L ++VR F S+ YL A G++ VG
Sbjct: 184 ADDILPAALNYLGLDPNSTKQADLEKAADLVSKVRPYVRKFHSSEYLNALATGEICFVVG 243
Query: 327 WSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
WS D+ A R + + +PK GA ++ D +AIPA ++
Sbjct: 244 WSGDIKQAQSRAAEAKNGVEIGYAIPKEGAQMFFDNFAIPADAK 287
>gi|398859600|ref|ZP_10615273.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM79]
gi|398236561|gb|EJN22339.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM79]
Length = 362
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 75/179 (41%), Gaps = 32/179 (17%)
Query: 209 KRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIGYKKSKF-QNHNLAPIEDWKDPW 267
K L K L ND G + PY WGT IGY K Q + I+ W +
Sbjct: 104 KNLDPKLLALLEKNDPGNEH------SVPYLWGTNGIGYNIDKVKQVLGIDRIDSWAVFF 157
Query: 268 WPELAGR-----ISMVNSPREVIVA----GGKIAVQQN----------LALLANQVRLFD 308
PE + +SM++S EV A G +N L + + F
Sbjct: 158 EPENLKKLSQCGVSMMDSADEVFPAVLNYMGMDPRSENPEDFKKAEAKLLTIRPYITYFH 217
Query: 309 STHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPA 361
S+ Y+ GD+ VA G+S DV A R N+A +PK G++LW DL AIPA
Sbjct: 218 SSKYVSDLANGDICVAFGYSGDVFQAANRAKEAKNGVNIAYAIPKEGSNLWFDLLAIPA 276
>gi|157375531|ref|YP_001474131.1| spermidine/putrescine-binding periplasmic protein [Shewanella
sediminis HAW-EB3]
gi|157317905|gb|ABV37003.1| spermidine/putrescine-binding periplasmic protein [Shewanella
sediminis HAW-EB3]
Length = 358
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 108/245 (44%), Gaps = 49/245 (20%)
Query: 207 WFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDP 266
+ ++LS KW RS G ++ +A PY WGT+ I Y+ + PI WK
Sbjct: 115 FLEQLSPKW----RSAFPGAVE-----YAIPYFWGTVGIVYRHDVIKE----PITHWKQL 161
Query: 267 W--WPELAGRISMVNSPREVIVAGGK---------IAVQQNLA--LLANQVRLFDSTHYL 313
+ P+L G++ M++ PR++I G K +++Q N +L +Q + +S Y+
Sbjct: 162 YSPAPDLKGKLGMIDEPRDLIGMGLKSLGYSANSEVSLQLNEVEEVLQSQKAMVNSYIYM 221
Query: 314 KA-----FGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETK 368
G++ ++ ++ D L + N+ V+P+ G ++W D
Sbjct: 222 TLDEHSPIVTGEILASMIYNGDALMVKEHSENLTFVLPEEGGAIWVDYLT---------- 271
Query: 369 QIGGQVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALESTLVKLPEELLKGK--- 425
IG + + P L + ++ F Q A Q V A+P+ L LP+E L K
Sbjct: 272 -IGAKAKEPD-LAYAFLNFINQAEHAAQLAQYVYY-ATPNLAAEKL--LPDEFLNDKVIY 326
Query: 426 PSVDT 430
P D+
Sbjct: 327 PDADS 331
>gi|120555050|ref|YP_959401.1| extracellular solute-binding protein [Marinobacter aquaeolei VT8]
gi|120324899|gb|ABM19214.1| extracellular solute-binding protein, family 1 [Marinobacter
aquaeolei VT8]
Length = 368
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 81/178 (45%), Gaps = 44/178 (24%)
Query: 222 NDAGEIDPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR----- 274
+D +IDP G ++ PY WGT GY + + Q + AP + W + PE+ G+
Sbjct: 115 DDLEKIDP-GSQFSLPYLWGTNGYGYNEGRIQEILGDSAPTDSWALVFDPEVTGKLAAGG 173
Query: 275 --ISMVNSPREVIVA-------------------GGKI--AVQQNLALLANQVRLFDSTH 311
I+M++S E++ A GG++ AV+ N + F S+
Sbjct: 174 CGIAMLDSGEEMVRAAMAYIGLDPNSNNADDIKKGGEVIKAVRPN-------ITYFHSSR 226
Query: 312 YLKAFGIGDVWVAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIPAAS 363
Y+ GD+ VA G+S D+L A R + +PK GA LW D+ IPA +
Sbjct: 227 YIGDLANGDLCVAAGYSGDILQAAARAEEAENGNVIRYTIPKEGAVLWFDMMTIPAGA 284
>gi|332162254|ref|YP_004298831.1| putrescine ABC transporter periplasmic-binding protein [Yersinia
enterocolitica subsp. palearctica 105.5R(r)]
gi|386307807|ref|YP_006003863.1| putrescine ABC transporter putrescine-binding protein PotF
[Yersinia enterocolitica subsp. palearctica Y11]
gi|418242130|ref|ZP_12868647.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Yersinia enterocolitica subsp.
palearctica PhRBD_Ye1]
gi|433548238|ref|ZP_20504288.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Yersinia enterocolitica IP 10393]
gi|318606319|emb|CBY27817.1| putrescine ABC transporter putrescine-binding protein PotF
[Yersinia enterocolitica subsp. palearctica Y11]
gi|325666484|gb|ADZ43128.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|330860389|emb|CBX70699.1| putrescine-binding periplasmic protein [Yersinia enterocolitica
W22703]
gi|351778478|gb|EHB20631.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Yersinia enterocolitica subsp.
palearctica PhRBD_Ye1]
gi|431790798|emb|CCO67328.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Yersinia enterocolitica IP 10393]
Length = 369
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 74/165 (44%), Gaps = 29/165 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGY--KKSKFQNHNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP K +A PY W T IGY +K K AP+ W PE + +S +++
Sbjct: 123 DPDNK-YAIPYLWATTGIGYNVEKVKAALGKDAPVNSWDLVLKPENLEKLKSCGVSFLDA 181
Query: 281 PREV--------------IVAGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAV 325
P E+ I A L L L +R F S+ Y+ GD+ VAV
Sbjct: 182 PSEIFATVLNYLGKDPNSIQATDYTGPATELLLKLRPNIRYFHSSQYINDLANGDICVAV 241
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
GW+ D++ A R NVA +PK GA + D++A+PA ++
Sbjct: 242 GWAGDIMQASNRAKEAKNGVNVAYSIPKEGALAFFDVFAMPADAK 286
>gi|381352986|pdb|3TTL|A Chain A, Crystal Structure Of Apo-Spue
gi|381352987|pdb|3TTL|B Chain B, Crystal Structure Of Apo-Spue
Length = 340
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 74/165 (44%), Gaps = 26/165 (15%)
Query: 226 EIDPRGKIWAAPYRWGTMAIGYKKSKFQN-HNLAPIEDWKDPWWPELAGR-----ISMVN 279
E+ G +A PY WGT IGY +K + PI+ W + PE + ++ ++
Sbjct: 96 EVSDPGNQYAVPYLWGTNGIGYNVAKVKEVLGDQPIDSWAILFEPENMKKLAKCGVAFMD 155
Query: 280 SPREVIVAGGKI--------------AVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAV 325
S E++ A ++ L + V F S+ Y+ G++ VA
Sbjct: 156 SGDEMLPAALNYLGLDPNTHDPKDYKKAEEVLTKVRPYVSYFHSSKYISDLANGNICVAF 215
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
G+S DV A R ++ V+PK GA+LW DL AIPA ++
Sbjct: 216 GYSGDVFQAAARAEEAGKGIDIQYVIPKEGANLWFDLMAIPADAK 260
>gi|387893506|ref|YP_006323803.1| periplasmic putrescine-binding protein [Pseudomonas fluorescens
A506]
gi|387164504|gb|AFJ59703.1| periplasmic putrescine-binding protein [Pseudomonas fluorescens
A506]
Length = 362
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 77/180 (42%), Gaps = 32/180 (17%)
Query: 208 FKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIGYKKSKF-QNHNLAPIEDWKDP 266
FK L K L ND+G + PY WGT IGY K Q + I+ W
Sbjct: 103 FKNLDPKLLKLLEQNDSGNAH------SVPYLWGTNGIGYNVDKVKQVLGIDRIDSWAVL 156
Query: 267 WWPELAGR-----ISMVNSPREVIVA----GGKIAVQQN----------LALLANQVRLF 307
+ PE + ++ ++S E+ A GK +N L L + F
Sbjct: 157 FEPENIKKLHECGVAFLDSADELFPAILNYMGKDPRSENAEDYKQAEAKLLTLRPYITYF 216
Query: 308 DSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPA 361
S+ Y+ G++ VA G+S DV A R N+A +PK G++LW DL AIPA
Sbjct: 217 HSSKYISDLANGNICVAFGYSGDVFQAANRAKEAKNGVNIAYSIPKEGSNLWFDLLAIPA 276
>gi|271500855|ref|YP_003333880.1| family 1 extracellular solute-binding protein [Dickeya dadantii
Ech586]
gi|270344410|gb|ACZ77175.1| extracellular solute-binding protein family 1 [Dickeya dadantii
Ech586]
Length = 369
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 73/167 (43%), Gaps = 29/167 (17%)
Query: 226 EIDPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMV 278
E DP G +A PY W T IGY K + AP+ W PE + +S +
Sbjct: 121 EHDP-GHKYAVPYLWATTGIGYNVDKVKAVLGKDAPVNSWDLVLKPENLEKLKSCGVSFL 179
Query: 279 NSPREVIVA----GGKIAVQQN-----------LALLANQVRLFDSTHYLKAFGIGDVWV 323
++P E+ GK N L L +R F S+ Y+ GD+ V
Sbjct: 180 DAPAEIYATVLNYQGKNPNSTNESDYTKDATDLLLKLRPNIRYFHSSQYINDLANGDICV 239
Query: 324 AVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
A+GW+ DV+ A R N++ +PK GA + D++AIP ++
Sbjct: 240 AIGWAGDVMQAANRAKEAKNGVNISYSIPKEGALAFFDVFAIPKDAK 286
>gi|398993424|ref|ZP_10696374.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM21]
gi|398134794|gb|EJM23930.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM21]
Length = 368
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 83/186 (44%), Gaps = 38/186 (20%)
Query: 231 GKIWAAPYRWGTMAIGYKKSKFQNHN-LAPIEDWKDPWWPELAGR-----ISMVNSPREV 284
G +++APY WG+ I Y K + API + P++ R +++V++P EV
Sbjct: 126 GTLYSAPYTWGSNGITYNVDKIKERMPDAPIGSLAMIFDPKIVSRFADCGVTLVDAPTEV 185
Query: 285 IVAGGKI--------------AVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSD 330
I K A Q+ L + ++ FDS +YL + GDV +A+ WS D
Sbjct: 186 IPLALKYLGRDPRSAAPEDLKAAQELLLSVRPYIKKFDSVNYLTSLPNGDVCMAMTWSGD 245
Query: 331 VLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASRLETKQIGGQVRGPSPLIHQW 384
A+ R N+A +PK G+ +W D IPA + + H++
Sbjct: 246 YATAMARAEEAKLNINLAYFIPKEGSLIWFDNMYIPA----DAPHVANA--------HKF 293
Query: 385 IEFCLQ 390
+E+ +Q
Sbjct: 294 LEYLMQ 299
>gi|398863959|ref|ZP_10619500.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM78]
gi|398246009|gb|EJN31510.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM78]
Length = 368
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 86/195 (44%), Gaps = 39/195 (20%)
Query: 222 NDAGEIDPRGKIWAAPYRWGTMAIGYKKSKFQNHN-LAPIEDWKDPWWPELAGR-----I 275
+D DP G ++APY WG+ I Y K + API + P++ R +
Sbjct: 118 HDLQGFDP-GPTYSAPYTWGSNGITYNVDKIKERMPDAPIGSLAMIFDPKIVSRFADCGV 176
Query: 276 SMVNSPREVIVAGGKI--------------AVQQNLALLANQVRLFDSTHYLKAFGIGDV 321
++V++P EVI K A Q+ L + +R FDS +YL + GDV
Sbjct: 177 TLVDAPTEVIPLALKYLGRDPRSAKPEDLKAAQELLLSVRPYIRKFDSVNYLTSLPNGDV 236
Query: 322 WVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASRLETKQIGGQVR 375
+A+ WS D A+ R N++ +PK G+ +W D IPA + +
Sbjct: 237 CMAMTWSGDYATAMARAEEAKLNINLSYFIPKEGSLIWFDNMYIPA----DAPHVANA-- 290
Query: 376 GPSPLIHQWIEFCLQ 390
H+++E+ +Q
Sbjct: 291 ------HKFLEYLMQ 299
>gi|337267065|ref|YP_004611120.1| family 1 extracellular solute-binding protein [Mesorhizobium
opportunistum WSM2075]
gi|336027375|gb|AEH87026.1| extracellular solute-binding protein family 1 [Mesorhizobium
opportunistum WSM2075]
Length = 365
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 84/185 (45%), Gaps = 31/185 (16%)
Query: 204 DQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIGYKKSKFQNH-NLAPIED 262
D+ +S+ W S + DP G ++ Y WGT+ IGY K Q I+
Sbjct: 99 DKSKLPNISNMWDTV--SERTAKYDP-GNEYSVNYMWGTVGIGYNIKKVQAALGTDKIDS 155
Query: 263 WKDPWWPELAGR-----ISMVNSPREVIVAGGK-------------IAVQQNLALLANQ- 303
W + P+ + + +++SP ++I A K IA ++ AL+ +
Sbjct: 156 WDTFFNPDSLAKLKDCGVYVLDSPADIIPAALKYLGLDPNSTSPDDIAKAED-ALMKVRP 214
Query: 304 -VRLFDSTHYLKAFGIGDVWVAVGWSSDVLPA------VKRMSNVAVVVPKSGASLWADL 356
+R F S+ Y+ A GD+ +AVGWS DV A K+ + VPK GA +W D
Sbjct: 215 FIRKFHSSEYINALANGDICLAVGWSGDVFQARNRAVEAKQGVEIGYSVPKEGAQMWFDQ 274
Query: 357 WAIPA 361
AIPA
Sbjct: 275 MAIPA 279
>gi|395649466|ref|ZP_10437316.1| putrescine ABC transporter substrate-binding protein [Pseudomonas
extremaustralis 14-3 substr. 14-3b]
Length = 362
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 76/180 (42%), Gaps = 32/180 (17%)
Query: 208 FKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIGYKKSKF-QNHNLAPIEDWKDP 266
FK L K L ND G + PY WGT IGY K Q + I+ W
Sbjct: 103 FKNLDPKLLKLLEKNDPGNAH------SVPYLWGTNGIGYNVDKVKQVLGIDHIDSWAVL 156
Query: 267 WWPELAGR-----ISMVNSPREVIVA----GGKIAVQQN----------LALLANQVRLF 307
+ P+ + ++ ++S E+ A GK +N L L + F
Sbjct: 157 FEPQNIKKLNQCGVAFLDSADELFPAILNYMGKDPRSENPKDYEEAEAKLLTLRPYITYF 216
Query: 308 DSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPA 361
S+ Y+ GD+ VA G+S DV A R N+A +PK G++LW DL AIPA
Sbjct: 217 HSSKYISDLANGDICVAFGYSGDVFQAANRAKEAKNGVNIAYSIPKEGSNLWFDLLAIPA 276
>gi|414162976|ref|ZP_11419223.1| hypothetical protein HMPREF9697_01124 [Afipia felis ATCC 53690]
gi|410880756|gb|EKS28596.1| hypothetical protein HMPREF9697_01124 [Afipia felis ATCC 53690]
Length = 363
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 95/205 (46%), Gaps = 32/205 (15%)
Query: 188 SFAIKKRFIEPIAEAEDQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIGY 247
++ ++++ + + + D+ L++ W + N + DP G +AA Y WGT IGY
Sbjct: 80 AYFLQRQIVAGVFQKLDKTKLPNLANAWPEVM--NRLAQYDP-GNAYAANYMWGTTGIGY 136
Query: 248 KKSKFQNHNLAP---IEDWKDPWWPELAGR-----ISMVNSPREVIVAGGK-IAVQQN-- 296
+ L P I+ W + PE + I M++S +++ A + + N
Sbjct: 137 NVGTVRKI-LGPDAVIDSWDTIFDPEKIAKFKDCGIHMLDSADDILPAALNWLGLDPNST 195
Query: 297 -----------LALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------ 339
+A + VR F S+ YL A G++ +AVGWS D+ A KR +
Sbjct: 196 RREDLEKAAEAVAKIRPYVRKFHSSEYLSALATGEICLAVGWSGDIKQAQKRAAESNNGV 255
Query: 340 NVAVVVPKSGASLWADLWAIPAASR 364
+A +PK GA ++ D AIP+ ++
Sbjct: 256 EIAYAIPKEGAQMFFDNLAIPSDAK 280
>gi|428217887|ref|YP_007102352.1| extracellular solute-binding protein [Pseudanabaena sp. PCC 7367]
gi|427989669|gb|AFY69924.1| extracellular solute-binding protein family 1 [Pseudanabaena sp.
PCC 7367]
Length = 392
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 111/274 (40%), Gaps = 54/274 (19%)
Query: 204 DQDWFKRLSHKWKVYLRSNDAGEIDPR---GKIWAAPYRWGTMAIGYKKSKFQNHNLAPI 260
D D L L + D +DP G ++ P GT + Y + +
Sbjct: 131 DLDLLTELDKDKLSNLENLDQAFLDPSYDPGSAYSLPVSLGTTGLAYNSAAIIEEIGSEP 190
Query: 261 EDWKDPWWPELAGRISMVNSPREVIVA-------------GGKI-AVQQNLALLANQVRL 306
EDW+ W R++++N PREV+ G ++ A + L L V
Sbjct: 191 EDWQFMWEHIDRLRLTLLNDPREVMGMALHTLNYSYNSDNGDELQAAFERLQDLKPAVSK 250
Query: 307 FDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLE 366
FD+ + + GD +++ +S D L AV++ ++ ++P SG S+W D IP +
Sbjct: 251 FDTYAWAEPLMAGDYLISMAYSGDGLNAVRQNPDIKYILPASGTSIWTDAVVIPKTA--- 307
Query: 367 TKQIGGQVRGPSP-LIHQWIEFCLQ---TAR-------------ALP-FKQEV------I 402
P P + WI+F +Q AR ALP K+E+ +
Sbjct: 308 ----------PDPEAAYAWIDFIMQPEIAARMSEESSYGTANKAALPKIKEELKDIPAWL 357
Query: 403 PGASPSALESTLVKLPEELLKGKPSVDTNLIAGV 436
P A A LVKLP+E+L+ T L G+
Sbjct: 358 PSAEILAKSDRLVKLPDEVLQVYEGYWTRLTTGL 391
>gi|386396044|ref|ZP_10080822.1| spermidine/putrescine-binding periplasmic protein [Bradyrhizobium
sp. WSM1253]
gi|385736670|gb|EIG56866.1| spermidine/putrescine-binding periplasmic protein [Bradyrhizobium
sp. WSM1253]
Length = 368
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 75/164 (45%), Gaps = 28/164 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP G ++AA Y WGT IGY +K + A I+ W + PE + + M++S
Sbjct: 123 DP-GNVYAANYMWGTTGIGYNVAKLKQILGADAKIDSWDIVFKPENLAKFKDCGVHMLDS 181
Query: 281 PREVIVAG-------GKIAVQQNLALLAN-------QVRLFDSTHYLKAFGIGDVWVAVG 326
++ A Q +L A+ VR F S+ YL A G++ + VG
Sbjct: 182 ADDIFPAALSWLGLDPNSTKQADLEKAADVVAKVRPSVRKFHSSEYLSALATGEICLVVG 241
Query: 327 WSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
WS D++ A R + + +PK GA ++ D AIPA +R
Sbjct: 242 WSGDIMQARARAAEAKSGIEIGYAIPKEGAQMFFDNLAIPADAR 285
>gi|440288330|ref|YP_007341095.1| spermidine/putrescine-binding periplasmic protein
[Enterobacteriaceae bacterium strain FGI 57]
gi|440047852|gb|AGB78910.1| spermidine/putrescine-binding periplasmic protein
[Enterobacteriaceae bacterium strain FGI 57]
Length = 370
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 88/215 (40%), Gaps = 36/215 (16%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP K +A PY W T IGY K + AP+ W + PE + +S +++
Sbjct: 124 DPDNK-YAMPYMWATTGIGYNVDKVKAVLGADAPVNSWDLIFKPENLEKLKSCGVSFLDA 182
Query: 281 PREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAV 325
P EV A +L L L VR F S+ Y+ GD+ VA+
Sbjct: 183 PEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNVRYFHSSQYINDLANGDICVAI 242
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIP--AASRLETKQIGGQVRGP 377
GW+ DV A R NV+ +PK GA + D++A+P A ++ E Q + P
Sbjct: 243 GWAGDVWQAANRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAKNKDEAYQFLNYLMKP 302
Query: 378 SPLIH--QWIEFCLQTARALPFKQEVI---PGASP 407
+ H + + + P E I PG P
Sbjct: 303 EVVAHISDHVFYANANKASTPLVSEAIRNNPGIYP 337
>gi|72160685|ref|YP_288342.1| polyamine-binding lipoprotein [Thermobifida fusca YX]
gi|71914417|gb|AAZ54319.1| putative polyamine-binding lipoprotein [Thermobifida fusca YX]
Length = 412
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 63/161 (39%), Gaps = 41/161 (25%)
Query: 231 GKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVIVAGGK 290
G + PY G I Y + I KD W PE GR+ M+ P+E+
Sbjct: 168 GNQYTVPYASGITGIAYDPERVGRE----ITSIKDLWDPEFKGRVGMMRDPQEI------ 217
Query: 291 IAVQQNLALLANQVRLFDST--------------------------HYLKAFGIGDVWVA 324
N ALL N V DST Y++ GD+W+
Sbjct: 218 ----SNFALLYNGVAPEDSTPEDWEAAAEVLKKQRDDGIVRAYYEQDYIQPLTNGDIWIT 273
Query: 325 VGWSSDVLPA-VKRMSNVAVVVPKSGASLWADLWAIPAASR 364
+ WS D+ + +N+ V+P+ GA+LW D IP ++
Sbjct: 274 MAWSGDIYQVNAEEGTNLKFVIPEEGATLWTDNLTIPITAQ 314
>gi|398963475|ref|ZP_10679632.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM30]
gi|398149693|gb|EJM38332.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM30]
Length = 365
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 87/328 (26%), Positives = 138/328 (42%), Gaps = 54/328 (16%)
Query: 138 LRVVSLQNSVPQSWVKDFMRSQGKRLKF---------QMNLCASIDGIVNNLSTPFNK-L 187
LRV + + + VK F G R+ + + L A G ++ P N L
Sbjct: 28 LRVYNWSDYIAPDTVKKFEDETGIRVTYDVFDSNETLEARLLAGKSGY--DIVVPSNSFL 85
Query: 188 SFAIKKRFIEPIAEAEDQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIGY 247
+ IK +P+ +++ +W K L+ V L++ A + D A PY WG++ IGY
Sbjct: 86 AKQIKAGVYQPLDKSKLSNW-KNLN---PVLLKNAAASDPD---NAHAFPYMWGSIGIGY 138
Query: 248 KKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNSPREVIVAG-----------G 289
K + AP W + PE A + IS ++SP E+I A
Sbjct: 139 NPDKVKEVLGANAPTNSWDLLFKPENAEKLKACGISFLDSPTEMIPAALHYLGYPVNDKD 198
Query: 290 KIAVQQNLALLAN---QVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSN------ 340
K + + AL V F S+ Y+ G++ VAVG+S DVL A R
Sbjct: 199 KAHILEAEALFMKIRPYVAYFHSSKYISDLANGNICVAVGYSGDVLQAKARAVEAGNKVQ 258
Query: 341 VAVVVPKSGASLWADLWAIP-AASRLETKQIGGQVRGPSPLIHQWIE---FCLQTARALP 396
+ +PK GA + D+ AIP A+ ++ + +I + + A A P
Sbjct: 259 IDYSIPKEGAGSFYDMVAIPRDAANVDNAYLFMNFLMRPDIIAEITNSNGYSNANAAATP 318
Query: 397 FKQEVI---PGASPS-ALESTLVKLPEE 420
E I PG+ PS A+ +TL +P++
Sbjct: 319 LVDEAIRNDPGSYPSQAVMATLYAVPDQ 346
>gi|26989866|ref|NP_745291.1| polyamine ABC transporter substrate-binding protein [Pseudomonas
putida KT2440]
gi|24984773|gb|AAN68755.1|AE016507_6 periplasmic polyamine-binding protein, putative [Pseudomonas putida
KT2440]
Length = 362
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 69/159 (43%), Gaps = 27/159 (16%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQNH-NLAPIEDWKDPWWPELAGR-----ISMVNSP 281
DP G +A PY WGT IGY K + + I+ W + PE + ++ ++SP
Sbjct: 118 DP-GNQYAVPYLWGTNGIGYNVDKVKAALGVDHIDSWAVLFEPENLKKLKQCGVAFMDSP 176
Query: 282 REVIVA--------------GGKIAVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGW 327
E+ A G + L L + F S+ Y+ GDV +A G+
Sbjct: 177 DELFPAVLNYLGMDPRSEKPGDYAKAEARLLELRPYITYFHSSKYVSDLANGDVCIAFGY 236
Query: 328 SSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIP 360
S DV A R VA +PK G++LW DL AIP
Sbjct: 237 SGDVFQAANRAVEAKNGVKVAYSIPKEGSNLWFDLLAIP 275
>gi|222084921|ref|YP_002543450.1| spermidine/putrescine ABC transporter [Agrobacterium radiobacter
K84]
gi|221722369|gb|ACM25525.1| spermidine/putrescine ABC transporter [Agrobacterium radiobacter
K84]
Length = 374
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 75/162 (46%), Gaps = 31/162 (19%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQ---NHNLAPIEDWKDPWWPELAGR-----ISMVN 279
DP G +A Y WGT +GY K + + AP D + P LA + I +++
Sbjct: 130 DP-GNQYAVDYMWGTSGVGYNVDKVKQILGTDEAP--DINVIFDPALAAKFKDCGIYVLD 186
Query: 280 SPREVIVAGGKI--------------AVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAV 325
SP +VI A + ++ L + +R F S+ Y+ A GD+ +
Sbjct: 187 SPTDVIPAALRYLGLDPNSTKPEDFKKAEELLTAVRPNIRKFHSSEYINALANGDICLTF 246
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPA 361
G+S DVL A R + N++ +PK GA +W D+ AIPA
Sbjct: 247 GYSGDVLQARNRAAEAKNGINISYSIPKKGAQMWFDVMAIPA 288
>gi|422356129|ref|ZP_16436821.1| bacterial extracellular solute-binding protein [Escherichia coli MS
117-3]
gi|422763989|ref|ZP_16817742.1| extracellular solute-binding protein [Escherichia coli E1167]
gi|422775327|ref|ZP_16828983.1| bacterial extracellular solute-binding protein [Escherichia coli
H120]
gi|323947122|gb|EGB43133.1| bacterial extracellular solute-binding protein [Escherichia coli
H120]
gi|324015948|gb|EGB85167.1| bacterial extracellular solute-binding protein [Escherichia coli MS
117-3]
gi|324116167|gb|EGC10090.1| extracellular solute-binding protein [Escherichia coli E1167]
Length = 395
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 75/166 (45%), Gaps = 31/166 (18%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQ---NHNLAPIEDWKDPWWPELAGR-----ISMVN 279
DP K +A PY W T IGY K + N AP++ W PE + +S ++
Sbjct: 149 DPDNK-FAMPYMWATTGIGYNVDKVKAVLGEN-APVDSWDLILKPENLEKLKSCGVSFLD 206
Query: 280 SPREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVA 324
+P EV A +L L L +R F S+ Y+ GD+ VA
Sbjct: 207 APEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVA 266
Query: 325 VGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
+GW+ DV A R NV+ ++PK GA + D++A+PA ++
Sbjct: 267 IGWAGDVWQASNRAKEAKNGVNVSFLIPKEGAMAFFDVFAMPADAK 312
>gi|399519022|ref|ZP_10759830.1| Putrescine transporter periplasmic protein [Pseudomonas
pseudoalcaligenes CECT 5344]
gi|399112846|emb|CCH36388.1| Putrescine transporter periplasmic protein [Pseudomonas
pseudoalcaligenes CECT 5344]
Length = 365
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 94/215 (43%), Gaps = 35/215 (16%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP G ++ PY WGT+ IGY K + + AP++ W + PE + +S ++S
Sbjct: 120 DP-GNQYSIPYMWGTIGIGYNVEKVKAVLGDNAPVDSWDLVFKPENIEKLKSCGVSFLDS 178
Query: 281 PREVIVAG----------GKI----AVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVG 326
P E++ A GK ++ + V F S+ Y+ G++ VA+G
Sbjct: 179 PTEILPAALHYLGYAPDSGKADELKKAEELFLSIRPSVTYFHSSKYISDLANGNICVAIG 238
Query: 327 WSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPA-ASRLETKQIG-GQVRGPS 378
+S D+ + R V +PK GA + D+ A+PA A +E + + P
Sbjct: 239 YSGDIYQSKARAEEAKNGVEVGYNIPKEGAGSFFDMLAVPADAKNVEAAHVFLNYLMKPE 298
Query: 379 PL--IHQWIEFCLQTARALPFKQEVI---PGASPS 408
+ I +++F A A P E + PG PS
Sbjct: 299 VMASITNYVQFPNANAAATPLVDEALRTDPGVYPS 333
>gi|385333806|ref|YP_005887757.1| spermidine/putrescine ABC transporter substrate-binding protein
[Marinobacter adhaerens HP15]
gi|311696956|gb|ADP99829.1| spermidine/putrescine ABC transporter periplasmic substrate-binding
protein [Marinobacter adhaerens HP15]
Length = 346
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 88/216 (40%), Gaps = 33/216 (15%)
Query: 226 EIDPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVI 285
+IDP + ++ PY WGT + + + P+ W+D W GR+ + N REV
Sbjct: 115 DIDPENQ-FSVPYLWGTTGLAVDTADIEGE---PVTAWEDLWEDRFDGRVMLTNDMREVF 170
Query: 286 VAGGKI--------------AVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDV 331
G ++ A + LA L VR F+S + G+ V + W+ +
Sbjct: 171 HVGLRVLGYSGNSTNPDEIEAAYEKLAELMPSVRTFNSDAPRMPYLEGEADVGMIWNGEA 230
Query: 332 LPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGQVRGPSPLIHQWIEFCLQT 391
+ M ++ V P+ G W D + IP + P HQ+I F LQ
Sbjct: 231 VMGKDTMESLEYVYPEEGIIAWLDSFVIPK-----------NAKNPEA-AHQFISFVLQP 278
Query: 392 ARALPFKQEVIPGASPSALESTLVKLPEELLKGKPS 427
+ +E I A+P+ L LP+E+ + S
Sbjct: 279 EISALISEE-IGYATPNLAARDL--LPDEVANNRAS 311
>gi|386012138|ref|YP_005930415.1| Periplasmic polyamine-binding protein, putative [Pseudomonas putida
BIRD-1]
gi|313498844|gb|ADR60210.1| Periplasmic polyamine-binding protein, putative [Pseudomonas putida
BIRD-1]
Length = 362
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 69/159 (43%), Gaps = 27/159 (16%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQNH-NLAPIEDWKDPWWPELAGR-----ISMVNSP 281
DP G +A PY WGT IGY K + + I+ W + PE + ++ ++SP
Sbjct: 118 DP-GNQYAVPYLWGTNGIGYNVDKVKAALGVDRIDSWAVLFEPENLKKLKQCGVAFMDSP 176
Query: 282 REVIVA--------------GGKIAVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGW 327
E+ A G + L L + F S+ Y+ GDV +A G+
Sbjct: 177 DELFPAVLNYLGMDPRSEKPGDYAKAEARLLELRPYITYFHSSKYVSDLANGDVCIAFGY 236
Query: 328 SSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIP 360
S DV A R VA +PK G++LW DL AIP
Sbjct: 237 SGDVFQAANRAVEAKNGVKVAYSIPKEGSNLWFDLLAIP 275
>gi|398940763|ref|ZP_10669441.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM41(2012)]
gi|398162380|gb|EJM50576.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM41(2012)]
Length = 365
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 96/220 (43%), Gaps = 35/220 (15%)
Query: 235 AAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNSPREVIVA 287
A PY WG++ IG+ K + + AP W + PE A + IS ++SP E++ A
Sbjct: 126 AFPYMWGSIGIGFNPEKVKEVLGSNAPTNSWDLLFKPENAAKLKACGISFLDSPTEMLPA 185
Query: 288 G----GKIAVQQNLALLAN----------QVRLFDSTHYLKAFGIGDVWVAVGWSSDVLP 333
G QN +A V F S+ Y+ G++ VAVG+S DVL
Sbjct: 186 ALHYLGYPVNSQNKDQIAEAEALFMKIRPSVAYFHSSKYISDLANGNICVAVGYSGDVLQ 245
Query: 334 AVKRMSN------VAVVVPKSGASLWADLWAIP-AASRLETKQIGGQVRGPSPLIHQW-- 384
A R V +PK GA + D+ AIP A+ +E + +I +
Sbjct: 246 AKARAQEAGDKVKVDYSIPKEGAGSFYDMVAIPRDAANVENAYLFMNFLMRPDIIAEITN 305
Query: 385 -IEFCLQTARALPFKQEVI---PGASPS-ALESTLVKLPE 419
I + A A P E I PG+ PS A+ +TL +P+
Sbjct: 306 NIGYSNANAAATPLVDEAIRDDPGSYPSQAVMATLYAIPD 345
>gi|157375543|ref|YP_001474143.1| putrescine-binding periplasmic protein [Shewanella sediminis
HAW-EB3]
gi|157317917|gb|ABV37015.1| putrescine-binding periplasmic protein precursor [Shewanella
sediminis HAW-EB3]
Length = 362
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 75/163 (46%), Gaps = 30/163 (18%)
Query: 230 RGKIWAAPYRWGTMAIGY---KKSKFQNHNLAPIEDWKDPWWPELAGR-----ISMVNSP 281
G A PY WGT IGY K SK + P+ W+ + ++ + ++MV++P
Sbjct: 119 EGNQHAIPYMWGTTGIGYNIDKVSKILGNK--PVNTWELLFQVDIVSKFTDCGVAMVDAP 176
Query: 282 REVIVAGGKIA--------------VQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGW 327
EV+ A K V+++L + + F S+ Y+ G++ +A+GW
Sbjct: 177 SEVVSAMLKYLGKNPNSQDLADLKLVEEHLLKIRPYITYFHSSSYVTDLASGNICLAMGW 236
Query: 328 SSDVLPAVKRM------SNVAVVVPKSGASLWADLWAIPAASR 364
S DV A R NV V+P+ GA WAD + I + S+
Sbjct: 237 SGDVFMAANRAIEAKNGINVNYVIPREGAQGWADTFNITSDSK 279
>gi|398381287|ref|ZP_10539397.1| spermidine/putrescine-binding periplasmic protein [Rhizobium sp.
AP16]
gi|397719592|gb|EJK80159.1| spermidine/putrescine-binding periplasmic protein [Rhizobium sp.
AP16]
Length = 365
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 75/162 (46%), Gaps = 31/162 (19%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQ---NHNLAPIEDWKDPWWPELAGR-----ISMVN 279
DP G +A Y WGT +GY K + + AP D + P LA + I +++
Sbjct: 121 DP-GNQYAVDYMWGTSGVGYNVDKVKQILGTDEAP--DINVIFDPALAAKFKDCGIYVLD 177
Query: 280 SPREVIVAGGKI--------------AVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAV 325
SP +VI A + ++ L + +R F S+ Y+ A GD+ +
Sbjct: 178 SPTDVIPAALRYLGLDPNSTKPEDFKKAEELLTAVRPNIRKFHSSEYINALANGDICLTF 237
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPA 361
G+S DVL A R + N++ +PK GA +W D+ AIPA
Sbjct: 238 GYSGDVLQARNRAAEAKNGINISYSIPKKGAQMWFDVMAIPA 279
>gi|28900222|ref|NP_799877.1| spermidine/putrescine ABC transporter periplasmic
spermidine/putrescine-binding protein [Vibrio
parahaemolyticus RIMD 2210633]
gi|260361653|ref|ZP_05774680.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Vibrio
parahaemolyticus K5030]
gi|260880784|ref|ZP_05893139.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Vibrio
parahaemolyticus AN-5034]
gi|260896506|ref|ZP_05905002.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Vibrio
parahaemolyticus Peru-466]
gi|260899480|ref|ZP_05907875.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Vibrio
parahaemolyticus AQ4037]
gi|28808533|dbj|BAC61710.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio
parahaemolyticus RIMD 2210633]
gi|308089236|gb|EFO38931.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Vibrio
parahaemolyticus Peru-466]
gi|308092107|gb|EFO41802.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Vibrio
parahaemolyticus AN-5034]
gi|308109246|gb|EFO46786.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Vibrio
parahaemolyticus AQ4037]
gi|308112748|gb|EFO50288.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Vibrio
parahaemolyticus K5030]
Length = 344
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 90/213 (42%), Gaps = 44/213 (20%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVIVA 287
DP+ ++ PY WG I Y +S + P+ W D W + ++ +++ R+V
Sbjct: 117 DPKND-YSLPYIWGITGISYNESMVEQ----PVTKWADLWESQYEQQVMLIDDVRDVF-- 169
Query: 288 GGKIAVQQN------------------LALLANQVRLFDSTHYLKAFGIGDVWVAVGWSS 329
+A+++N L L N V L++S + G+ V + W+
Sbjct: 170 --GMALKKNGHSVNTKDEAEIKQAFDSLVALKNNVLLYNSDAPQVPYVSGETSVGMQWNG 227
Query: 330 DVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGQVRGPSPLIHQWIEFCL 389
+ M + V+P+ GA LW D + IP+ S+ +T L H++I F
Sbjct: 228 NAFQGQVEMPELKFVMPEEGAVLWMDNFTIPSGSKNKT------------LAHKFINFMY 275
Query: 390 QTARALPFKQEVIPG-ASPSALESTLVKLPEEL 421
Q+ + E++ SA + KLPEEL
Sbjct: 276 QSEN----QAEIVTSLGYASATNAGRDKLPEEL 304
>gi|257066715|ref|YP_003152971.1| family 1 extracellular solute-binding protein [Anaerococcus
prevotii DSM 20548]
gi|256798595|gb|ACV29250.1| extracellular solute-binding protein family 1 [Anaerococcus
prevotii DSM 20548]
Length = 359
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 72/161 (44%), Gaps = 34/161 (21%)
Query: 226 EIDPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVI 285
E DP G ++ PY WGT I Y K+Q + + WK+ W P+ G I + RE +
Sbjct: 125 EYDP-GNEYSIPYLWGTFGILYNTKKYQASDF---DSWKNLWDPKFEGEILSFDGARETM 180
Query: 286 VAG---------------------GKIAVQQNL-ALLANQVRLFDSTHYLKAFGIGDVWV 323
G I + N+ A+LA+++R++ + + V
Sbjct: 181 GIGLLANNLSLNTEDPKKLTEIRNELIGLMGNVKAILADEIRMY--------MALEEANV 232
Query: 324 AVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 364
+ +S D A++ +++ V+PK G+++W D IP S+
Sbjct: 233 GLTFSGDASSAIESNEDLSYVIPKEGSNIWFDTMVIPKTSK 273
>gi|148550287|ref|YP_001270389.1| extracellular solute-binding protein [Pseudomonas putida F1]
gi|148514345|gb|ABQ81205.1| extracellular solute-binding protein, family 1 [Pseudomonas putida
F1]
Length = 364
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 73/163 (44%), Gaps = 27/163 (16%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQNH-NLAPIEDWKDPWWPELAGRIS-----MVNSP 281
DP G +A PY WGT IGY K + + I+ W + PE ++S ++S
Sbjct: 120 DP-GNQYAVPYLWGTNGIGYNVDKVKAALGVDTIDSWAVLFEPENMKKLSKCGVAFLDSA 178
Query: 282 REVIVA--------------GGKIAVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGW 327
E++ A + +Q L + V F S+ Y+ GD+ VA G+
Sbjct: 179 DEMLPAVLNYMGLNPNSTDPKDYVKAEQKLLAVRPYVTYFHSSKYITDLANGDICVAAGF 238
Query: 328 SSDVLPA------VKRMSNVAVVVPKSGASLWADLWAIPAASR 364
S DV A K+ N+A +PK G +LW D+ AIP ++
Sbjct: 239 SGDVFQAKARAEEAKKGVNLAYAIPKEGGNLWFDVLAIPKDAK 281
>gi|238789658|ref|ZP_04633441.1| Putrescine-binding periplasmic protein [Yersinia frederiksenii ATCC
33641]
gi|238722211|gb|EEQ13868.1| Putrescine-binding periplasmic protein [Yersinia frederiksenii ATCC
33641]
Length = 369
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 74/165 (44%), Gaps = 29/165 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGY--KKSKFQNHNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP K +A PY W T IGY +K K P+ W PE + +S +++
Sbjct: 123 DPENK-YAIPYLWATTGIGYNVEKVKAALGTDVPVNSWDLVLKPENLEKLKSCGVSFLDA 181
Query: 281 PREV--------------IVAGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAV 325
P E+ I A +L L L +R F S+ Y+ GD+ VAV
Sbjct: 182 PSEIFATVLNYLGKDPNSIQASDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAV 241
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
GW+ DV+ A R NVA +PK GA + D++A+P+ ++
Sbjct: 242 GWAGDVMQASNRAKEAKNGVNVAYSIPKEGALAFFDVFAMPSDAK 286
>gi|452877940|ref|ZP_21955185.1| polyamine transport protein PotD [Pseudomonas aeruginosa VRFPA01]
gi|452185377|gb|EME12395.1| polyamine transport protein PotD [Pseudomonas aeruginosa VRFPA01]
Length = 353
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 101/228 (44%), Gaps = 42/228 (18%)
Query: 219 LRSNDAGEIDP---RGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWP----EL 271
L++ DAG +D +G ++ PY + T +GY K++ + P DW + P ++
Sbjct: 100 LKNEDAGYLDKDFDKGNRYSLPYAFTTTLVGYNKTELDKLGIDP-ADWSVIFDPAVLQKI 158
Query: 272 AGRISMVNSPREVIVAGGKIAVQ-------------QNLALLANQV-RLFDSTHYLKAFG 317
GR+++++ P+E+ A K Q L L A F+S+ Y+K
Sbjct: 159 RGRVTVMDDPQELFGAALKYLGHSANDTDPQHWKEAQALILAAKPYWAAFNSSSYIKELT 218
Query: 318 IGDVWVAVGWSSDVL------PAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIG 371
+G++WVA G+SSD+ A R V +P+ GA L D I S
Sbjct: 219 LGNIWVAHGYSSDMYQARADAEAAGRAFKVDFALPRQGAVLAIDSMVIHKGS-------- 270
Query: 372 GQVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALESTLVKLPE 419
R P L +++I+F L A ++ G +P+A +K PE
Sbjct: 271 ---RNPD-LAYRFIDFMLDGRNASELANQIGTG-TPNAAALPFIK-PE 312
>gi|414166333|ref|ZP_11422567.1| hypothetical protein HMPREF9696_00422 [Afipia clevelandensis ATCC
49720]
gi|410895093|gb|EKS42879.1| hypothetical protein HMPREF9696_00422 [Afipia clevelandensis ATCC
49720]
Length = 370
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 76/165 (46%), Gaps = 30/165 (18%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAP---IEDWKDPWWPELAGR-----ISMVN 279
DP G +AA Y WGT IGY K Q L P ++ W + PE + I M++
Sbjct: 125 DP-GNAFAANYMWGTTGIGYNVKKVQ-EILGPEAKLDSWSAVFVPENLAKFKDCGIHMLD 182
Query: 280 SPREVIVAG----------GKIAVQQNLALLANQVR----LFDSTHYLKAFGIGDVWVAV 325
S +++ A K A + A L ++VR F S+ YL A G++ V
Sbjct: 183 SADDILPAALNYLGLDPNSTKQADLEKAAELVSKVRPYVRKFHSSEYLNALATGEICFVV 242
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
GWS D+ A R + + +PK GA ++ D +AIPA ++
Sbjct: 243 GWSGDIKQAQSRAAEARNGVEIGYTIPKEGAQMFFDNFAIPADAK 287
>gi|51595702|ref|YP_069893.1| putrescine ABC transporter periplasmic-binding protein [Yersinia
pseudotuberculosis IP 32953]
gi|108806618|ref|YP_650534.1| putrescine ABC transporter periplasmic-binding protein [Yersinia
pestis Antiqua]
gi|108812810|ref|YP_648577.1| putrescine ABC transporter periplasmic-binding protein [Yersinia
pestis Nepal516]
gi|145599638|ref|YP_001163714.1| putrescine ABC transporter periplasmic-binding protein [Yersinia
pestis Pestoides F]
gi|149366690|ref|ZP_01888724.1| putrescine-binding periplasmic protein precursor [Yersinia pestis
CA88-4125]
gi|153950739|ref|YP_001401610.1| putrescine ABC transporter periplasmic-binding protein [Yersinia
pseudotuberculosis IP 31758]
gi|162421714|ref|YP_001606071.1| putrescine ABC transporter periplasmic-binding protein [Yersinia
pestis Angola]
gi|165924359|ref|ZP_02220191.1| putrescine ABC transporter, periplasmic putrescine binding protein
[Yersinia pestis biovar Orientalis str. F1991016]
gi|165936192|ref|ZP_02224761.1| putrescine ABC transporter, periplasmic putrescine binding protein
[Yersinia pestis biovar Orientalis str. IP275]
gi|166009827|ref|ZP_02230725.1| putrescine ABC transporter, periplasmic putrescine binding protein
[Yersinia pestis biovar Antiqua str. E1979001]
gi|166211526|ref|ZP_02237561.1| putrescine ABC transporter, periplasmic putrescine binding protein
[Yersinia pestis biovar Antiqua str. B42003004]
gi|167399794|ref|ZP_02305312.1| putrescine ABC transporter, periplasmic putrescine binding protein
[Yersinia pestis biovar Antiqua str. UG05-0454]
gi|167419605|ref|ZP_02311358.1| putrescine ABC transporter, periplasmic putrescine binding protein
[Yersinia pestis biovar Orientalis str. MG05-1020]
gi|167424261|ref|ZP_02316014.1| putrescine ABC transporter, periplasmic putrescine binding protein
[Yersinia pestis biovar Mediaevalis str. K1973002]
gi|167469049|ref|ZP_02333753.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily protein [Yersinia pestis FV-1]
gi|170024955|ref|YP_001721460.1| putrescine ABC transporter periplasmic-binding protein [Yersinia
pseudotuberculosis YPIII]
gi|186894775|ref|YP_001871887.1| putrescine ABC transporter periplasmic-binding protein [Yersinia
pseudotuberculosis PB1/+]
gi|218928481|ref|YP_002346356.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Yersinia pestis CO92]
gi|229841290|ref|ZP_04461449.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Yersinia pestis biovar Orientalis str.
PEXU2]
gi|229843393|ref|ZP_04463539.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Yersinia pestis biovar Orientalis str.
India 195]
gi|229895767|ref|ZP_04510937.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Yersinia pestis Pestoides A]
gi|229903229|ref|ZP_04518342.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Yersinia pestis Nepal516]
gi|270487022|ref|ZP_06204096.1| bacterial extracellular solute-binding protein [Yersinia pestis KIM
D27]
gi|294503326|ref|YP_003567388.1| putrescine-binding periplasmic protein [Yersinia pestis Z176003]
gi|384121769|ref|YP_005504389.1| putrescine-binding periplasmic protein [Yersinia pestis D106004]
gi|384125432|ref|YP_005508046.1| putrescine-binding periplasmic protein [Yersinia pestis D182038]
gi|384141038|ref|YP_005523740.1| putrescine ABC transporter periplasmic-binding protein [Yersinia
pestis A1122]
gi|384415312|ref|YP_005624674.1| putrescine ABC transporter periplasmic-binding protein [Yersinia
pestis biovar Medievalis str. Harbin 35]
gi|420546012|ref|ZP_15044054.1| putrescine-binding periplasmic protein [Yersinia pestis PY-01]
gi|420551322|ref|ZP_15048809.1| putrescine-binding periplasmic protein [Yersinia pestis PY-02]
gi|420556862|ref|ZP_15053699.1| putrescine-binding periplasmic protein [Yersinia pestis PY-03]
gi|420562420|ref|ZP_15058583.1| putrescine-binding periplasmic protein [Yersinia pestis PY-04]
gi|420567439|ref|ZP_15063123.1| putrescine-binding periplasmic protein [Yersinia pestis PY-05]
gi|420573088|ref|ZP_15068249.1| putrescine-binding periplasmic protein [Yersinia pestis PY-06]
gi|420578406|ref|ZP_15073065.1| putrescine-binding periplasmic protein [Yersinia pestis PY-07]
gi|420583781|ref|ZP_15077952.1| putrescine-binding periplasmic protein [Yersinia pestis PY-08]
gi|420588922|ref|ZP_15082586.1| putrescine-binding periplasmic protein [Yersinia pestis PY-09]
gi|420594243|ref|ZP_15087376.1| putrescine-binding periplasmic protein [Yersinia pestis PY-10]
gi|420599926|ref|ZP_15092456.1| putrescine-binding periplasmic protein [Yersinia pestis PY-11]
gi|420605403|ref|ZP_15097357.1| putrescine-binding periplasmic protein [Yersinia pestis PY-12]
gi|420610751|ref|ZP_15102191.1| putrescine-binding periplasmic protein [Yersinia pestis PY-13]
gi|420616055|ref|ZP_15106888.1| bacterial extracellular solute-binding family protein [Yersinia
pestis PY-14]
gi|420621445|ref|ZP_15111640.1| putrescine-binding periplasmic protein [Yersinia pestis PY-15]
gi|420626498|ref|ZP_15116222.1| putrescine-binding periplasmic protein [Yersinia pestis PY-16]
gi|420631706|ref|ZP_15120929.1| putrescine-binding periplasmic protein [Yersinia pestis PY-19]
gi|420636814|ref|ZP_15125505.1| putrescine-binding periplasmic protein [Yersinia pestis PY-25]
gi|420642346|ref|ZP_15130505.1| putrescine-binding periplasmic protein [Yersinia pestis PY-29]
gi|420647544|ref|ZP_15135254.1| putrescine-binding periplasmic protein [Yersinia pestis PY-32]
gi|420653181|ref|ZP_15140319.1| putrescine-binding periplasmic protein [Yersinia pestis PY-34]
gi|420658704|ref|ZP_15145282.1| putrescine-binding periplasmic protein [Yersinia pestis PY-36]
gi|420663998|ref|ZP_15150017.1| putrescine-binding periplasmic protein [Yersinia pestis PY-42]
gi|420668962|ref|ZP_15154515.1| bacterial extracellular solute-binding family protein [Yersinia
pestis PY-45]
gi|420674289|ref|ZP_15159368.1| putrescine-binding periplasmic protein [Yersinia pestis PY-46]
gi|420679845|ref|ZP_15164402.1| putrescine-binding periplasmic protein [Yersinia pestis PY-47]
gi|420685101|ref|ZP_15169109.1| putrescine-binding periplasmic protein [Yersinia pestis PY-48]
gi|420690277|ref|ZP_15173691.1| putrescine-binding periplasmic protein [Yersinia pestis PY-52]
gi|420696075|ref|ZP_15178772.1| putrescine-binding periplasmic protein [Yersinia pestis PY-53]
gi|420701483|ref|ZP_15183371.1| bacterial extracellular solute-binding family protein [Yersinia
pestis PY-54]
gi|420707437|ref|ZP_15188236.1| putrescine-binding periplasmic protein [Yersinia pestis PY-55]
gi|420712778|ref|ZP_15193045.1| putrescine-binding periplasmic protein [Yersinia pestis PY-56]
gi|420718189|ref|ZP_15197781.1| putrescine-binding periplasmic protein [Yersinia pestis PY-58]
gi|420723771|ref|ZP_15202593.1| putrescine-binding periplasmic protein [Yersinia pestis PY-59]
gi|420729368|ref|ZP_15207586.1| putrescine-binding periplasmic protein [Yersinia pestis PY-60]
gi|420734446|ref|ZP_15212171.1| putrescine-binding periplasmic protein [Yersinia pestis PY-61]
gi|420739919|ref|ZP_15217101.1| putrescine-binding periplasmic protein [Yersinia pestis PY-63]
gi|420745304|ref|ZP_15221816.1| putrescine-binding periplasmic protein [Yersinia pestis PY-64]
gi|420751046|ref|ZP_15226754.1| putrescine-binding periplasmic protein [Yersinia pestis PY-65]
gi|420756368|ref|ZP_15231339.1| putrescine-binding periplasmic protein [Yersinia pestis PY-66]
gi|420762171|ref|ZP_15236104.1| putrescine-binding periplasmic protein [Yersinia pestis PY-71]
gi|420767417|ref|ZP_15240838.1| putrescine-binding periplasmic protein [Yersinia pestis PY-72]
gi|420772395|ref|ZP_15245313.1| putrescine-binding periplasmic protein [Yersinia pestis PY-76]
gi|420777841|ref|ZP_15250166.1| putrescine-binding periplasmic protein [Yersinia pestis PY-88]
gi|420783361|ref|ZP_15255003.1| putrescine-binding periplasmic protein [Yersinia pestis PY-89]
gi|420788694|ref|ZP_15259708.1| bacterial extracellular solute-binding family protein [Yersinia
pestis PY-90]
gi|420794161|ref|ZP_15264645.1| putrescine-binding periplasmic protein [Yersinia pestis PY-91]
gi|420799283|ref|ZP_15269250.1| putrescine-binding periplasmic protein [Yersinia pestis PY-92]
gi|420804630|ref|ZP_15274064.1| putrescine-binding periplasmic protein [Yersinia pestis PY-93]
gi|420809886|ref|ZP_15278819.1| bacterial extracellular solute-binding family protein [Yersinia
pestis PY-94]
gi|420815566|ref|ZP_15283914.1| putrescine-binding periplasmic protein [Yersinia pestis PY-95]
gi|420820764|ref|ZP_15288616.1| putrescine-binding periplasmic protein [Yersinia pestis PY-96]
gi|420825852|ref|ZP_15293170.1| putrescine-binding periplasmic protein [Yersinia pestis PY-98]
gi|420831629|ref|ZP_15298392.1| putrescine-binding periplasmic protein [Yersinia pestis PY-99]
gi|420836477|ref|ZP_15302761.1| putrescine-binding periplasmic protein [Yersinia pestis PY-100]
gi|420841626|ref|ZP_15307426.1| putrescine-binding periplasmic protein [Yersinia pestis PY-101]
gi|420847242|ref|ZP_15312495.1| putrescine-binding periplasmic protein [Yersinia pestis PY-102]
gi|420852680|ref|ZP_15317268.1| putrescine-binding periplasmic protein [Yersinia pestis PY-103]
gi|420858176|ref|ZP_15321956.1| putrescine-binding periplasmic protein [Yersinia pestis PY-113]
gi|421762784|ref|ZP_16199581.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Yersinia pestis INS]
gi|51588984|emb|CAH20601.1| ABC type periplasmic putrescine/spermidine binding protein, potF
[Yersinia pseudotuberculosis IP 32953]
gi|108776458|gb|ABG18977.1| putrescine-binding periplasmic protein precursor [Yersinia pestis
Nepal516]
gi|108778531|gb|ABG12589.1| putrescine-binding periplasmic protein precursor [Yersinia pestis
Antiqua]
gi|115347092|emb|CAL19984.1| putrescine-binding periplasmic protein precursor [Yersinia pestis
CO92]
gi|145211334|gb|ABP40741.1| putrescine-binding periplasmic protein precursor [Yersinia pestis
Pestoides F]
gi|149291064|gb|EDM41139.1| putrescine-binding periplasmic protein precursor [Yersinia pestis
CA88-4125]
gi|152962234|gb|ABS49695.1| putrescine ABC transporter, periplasmic putrescine binding protein
[Yersinia pseudotuberculosis IP 31758]
gi|162354529|gb|ABX88477.1| putrescine ABC transporter, periplasmic putrescine binding protein
[Yersinia pestis Angola]
gi|165915806|gb|EDR34414.1| putrescine ABC transporter, periplasmic putrescine binding protein
[Yersinia pestis biovar Orientalis str. IP275]
gi|165923419|gb|EDR40551.1| putrescine ABC transporter, periplasmic putrescine binding protein
[Yersinia pestis biovar Orientalis str. F1991016]
gi|165991223|gb|EDR43524.1| putrescine ABC transporter, periplasmic putrescine binding protein
[Yersinia pestis biovar Antiqua str. E1979001]
gi|166207297|gb|EDR51777.1| putrescine ABC transporter, periplasmic putrescine binding protein
[Yersinia pestis biovar Antiqua str. B42003004]
gi|166962346|gb|EDR58367.1| putrescine ABC transporter, periplasmic putrescine binding protein
[Yersinia pestis biovar Orientalis str. MG05-1020]
gi|167050502|gb|EDR61910.1| putrescine ABC transporter, periplasmic putrescine binding protein
[Yersinia pestis biovar Antiqua str. UG05-0454]
gi|167057110|gb|EDR66873.1| putrescine ABC transporter, periplasmic putrescine binding protein
[Yersinia pestis biovar Mediaevalis str. K1973002]
gi|169751489|gb|ACA69007.1| extracellular solute-binding protein family 1 [Yersinia
pseudotuberculosis YPIII]
gi|186697801|gb|ACC88430.1| extracellular solute-binding protein family 1 [Yersinia
pseudotuberculosis PB1/+]
gi|229678999|gb|EEO75102.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Yersinia pestis Nepal516]
gi|229689740|gb|EEO81801.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Yersinia pestis biovar Orientalis str.
India 195]
gi|229697656|gb|EEO87703.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Yersinia pestis biovar Orientalis str.
PEXU2]
gi|229700690|gb|EEO88719.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Yersinia pestis Pestoides A]
gi|262361365|gb|ACY58086.1| putrescine-binding periplasmic protein precursor [Yersinia pestis
D106004]
gi|262365096|gb|ACY61653.1| putrescine-binding periplasmic protein precursor [Yersinia pestis
D182038]
gi|270335526|gb|EFA46303.1| bacterial extracellular solute-binding protein [Yersinia pestis KIM
D27]
gi|294353785|gb|ADE64126.1| putrescine-binding periplasmic protein precursor [Yersinia pestis
Z176003]
gi|320015816|gb|ADV99387.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Yersinia pestis biovar Medievalis str.
Harbin 35]
gi|342856167|gb|AEL74720.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Yersinia pestis A1122]
gi|391429137|gb|EIQ91021.1| putrescine-binding periplasmic protein [Yersinia pestis PY-01]
gi|391430413|gb|EIQ92134.1| putrescine-binding periplasmic protein [Yersinia pestis PY-02]
gi|391431954|gb|EIQ93448.1| putrescine-binding periplasmic protein [Yersinia pestis PY-03]
gi|391445044|gb|EIR05211.1| putrescine-binding periplasmic protein [Yersinia pestis PY-04]
gi|391445985|gb|EIR06067.1| putrescine-binding periplasmic protein [Yersinia pestis PY-05]
gi|391449804|gb|EIR09495.1| putrescine-binding periplasmic protein [Yersinia pestis PY-06]
gi|391461597|gb|EIR20195.1| putrescine-binding periplasmic protein [Yersinia pestis PY-07]
gi|391462641|gb|EIR21136.1| putrescine-binding periplasmic protein [Yersinia pestis PY-08]
gi|391464758|gb|EIR23010.1| putrescine-binding periplasmic protein [Yersinia pestis PY-09]
gi|391478057|gb|EIR35020.1| putrescine-binding periplasmic protein [Yersinia pestis PY-10]
gi|391479255|gb|EIR36070.1| putrescine-binding periplasmic protein [Yersinia pestis PY-12]
gi|391479435|gb|EIR36226.1| putrescine-binding periplasmic protein [Yersinia pestis PY-11]
gi|391493548|gb|EIR48888.1| putrescine-binding periplasmic protein [Yersinia pestis PY-13]
gi|391494646|gb|EIR49849.1| putrescine-binding periplasmic protein [Yersinia pestis PY-15]
gi|391497235|gb|EIR52109.1| bacterial extracellular solute-binding family protein [Yersinia
pestis PY-14]
gi|391509359|gb|EIR62991.1| putrescine-binding periplasmic protein [Yersinia pestis PY-16]
gi|391510142|gb|EIR63704.1| putrescine-binding periplasmic protein [Yersinia pestis PY-19]
gi|391514371|gb|EIR67479.1| putrescine-binding periplasmic protein [Yersinia pestis PY-25]
gi|391524903|gb|EIR77080.1| putrescine-binding periplasmic protein [Yersinia pestis PY-29]
gi|391527667|gb|EIR79561.1| putrescine-binding periplasmic protein [Yersinia pestis PY-34]
gi|391528645|gb|EIR80444.1| putrescine-binding periplasmic protein [Yersinia pestis PY-32]
gi|391541013|gb|EIR91591.1| putrescine-binding periplasmic protein [Yersinia pestis PY-36]
gi|391543171|gb|EIR93528.1| putrescine-binding periplasmic protein [Yersinia pestis PY-42]
gi|391544275|gb|EIR94507.1| bacterial extracellular solute-binding family protein [Yersinia
pestis PY-45]
gi|391558283|gb|EIS07178.1| putrescine-binding periplasmic protein [Yersinia pestis PY-46]
gi|391558950|gb|EIS07785.1| putrescine-binding periplasmic protein [Yersinia pestis PY-47]
gi|391560061|gb|EIS08733.1| putrescine-binding periplasmic protein [Yersinia pestis PY-48]
gi|391573487|gb|EIS20537.1| putrescine-binding periplasmic protein [Yersinia pestis PY-52]
gi|391574043|gb|EIS21001.1| putrescine-binding periplasmic protein [Yersinia pestis PY-53]
gi|391585571|gb|EIS30965.1| bacterial extracellular solute-binding family protein [Yersinia
pestis PY-54]
gi|391585813|gb|EIS31176.1| putrescine-binding periplasmic protein [Yersinia pestis PY-55]
gi|391589491|gb|EIS34379.1| putrescine-binding periplasmic protein [Yersinia pestis PY-56]
gi|391602784|gb|EIS46038.1| putrescine-binding periplasmic protein [Yersinia pestis PY-60]
gi|391602825|gb|EIS46075.1| putrescine-binding periplasmic protein [Yersinia pestis PY-58]
gi|391604444|gb|EIS47452.1| putrescine-binding periplasmic protein [Yersinia pestis PY-59]
gi|391617103|gb|EIS58687.1| putrescine-binding periplasmic protein [Yersinia pestis PY-61]
gi|391617910|gb|EIS59408.1| putrescine-binding periplasmic protein [Yersinia pestis PY-63]
gi|391624218|gb|EIS64885.1| putrescine-binding periplasmic protein [Yersinia pestis PY-64]
gi|391628962|gb|EIS68955.1| putrescine-binding periplasmic protein [Yersinia pestis PY-65]
gi|391640283|gb|EIS78856.1| putrescine-binding periplasmic protein [Yersinia pestis PY-71]
gi|391641901|gb|EIS80245.1| putrescine-binding periplasmic protein [Yersinia pestis PY-66]
gi|391642643|gb|EIS80890.1| putrescine-binding periplasmic protein [Yersinia pestis PY-72]
gi|391652353|gb|EIS89417.1| putrescine-binding periplasmic protein [Yersinia pestis PY-76]
gi|391657874|gb|EIS94341.1| putrescine-binding periplasmic protein [Yersinia pestis PY-88]
gi|391662913|gb|EIS98807.1| putrescine-binding periplasmic protein [Yersinia pestis PY-89]
gi|391665174|gb|EIT00787.1| bacterial extracellular solute-binding family protein [Yersinia
pestis PY-90]
gi|391671686|gb|EIT06596.1| putrescine-binding periplasmic protein [Yersinia pestis PY-91]
gi|391683384|gb|EIT17167.1| putrescine-binding periplasmic protein [Yersinia pestis PY-93]
gi|391684769|gb|EIT18392.1| putrescine-binding periplasmic protein [Yersinia pestis PY-92]
gi|391685532|gb|EIT19059.1| bacterial extracellular solute-binding family protein [Yersinia
pestis PY-94]
gi|391697257|gb|EIT29662.1| putrescine-binding periplasmic protein [Yersinia pestis PY-95]
gi|391700935|gb|EIT32985.1| putrescine-binding periplasmic protein [Yersinia pestis PY-96]
gi|391702206|gb|EIT34126.1| putrescine-binding periplasmic protein [Yersinia pestis PY-98]
gi|391711411|gb|EIT42379.1| putrescine-binding periplasmic protein [Yersinia pestis PY-99]
gi|391717995|gb|EIT48287.1| putrescine-binding periplasmic protein [Yersinia pestis PY-100]
gi|391718497|gb|EIT48738.1| putrescine-binding periplasmic protein [Yersinia pestis PY-101]
gi|391729174|gb|EIT58194.1| putrescine-binding periplasmic protein [Yersinia pestis PY-102]
gi|391732267|gb|EIT60859.1| putrescine-binding periplasmic protein [Yersinia pestis PY-103]
gi|391736137|gb|EIT64190.1| putrescine-binding periplasmic protein [Yersinia pestis PY-113]
gi|411176990|gb|EKS47005.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Yersinia pestis INS]
Length = 369
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 72/165 (43%), Gaps = 29/165 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP K +A PY W T IGY K + AP+ W PE + +S +++
Sbjct: 123 DPDNK-YAIPYLWATTGIGYNVEKVKAVLGEDAPVNSWDLVLKPENLEKLKSCGVSFLDA 181
Query: 281 PREVIVAG-GKIAVQQNLALLAN--------------QVRLFDSTHYLKAFGIGDVWVAV 325
P E+ + N L A+ +R F S+ Y+ GD+ VAV
Sbjct: 182 PSEIFATVLNYLGKDPNSTLTADYTGSATDLLLKLRPNIRYFHSSQYINDLANGDICVAV 241
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
GW+ D++ A R NVA +PK GA + D++A+P ++
Sbjct: 242 GWAGDIMQASNRAKEAKNGVNVAYSIPKEGALAFFDVFAMPTDAK 286
>gi|37520928|ref|NP_924305.1| periplasmic spermidine/putrescine-binding protein [Gloeobacter
violaceus PCC 7421]
gi|35211923|dbj|BAC89300.1| glr1359 [Gloeobacter violaceus PCC 7421]
Length = 361
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 68/150 (45%), Gaps = 19/150 (12%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVI-V 286
DP + + PY+WGT+ + +K + PI W+D W P GR+ +++ EV+ +
Sbjct: 127 DPDNR-YTVPYQWGTVGLAVDTAKVKR----PISRWEDLWDPAFKGRVVLLDDEFEVLGM 181
Query: 287 AGGKIAVQQN-------------LALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLP 333
A + +N LA L ++LFDS A G+VW+ W+ +
Sbjct: 182 ALQTLGFDKNTKDPAQLAKARAKLAQLRPNIKLFDSDSPKTALLSGEVWLGQVWNGEAAL 241
Query: 334 AVKRMSNVAVVVPKSGASLWADLWAIPAAS 363
A + + + P G +W D WA+P +
Sbjct: 242 AQRENPAIRYLCPAEGCGIWHDNWAVPKGA 271
>gi|431929349|ref|YP_007242383.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas
stutzeri RCH2]
gi|431827636|gb|AGA88753.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas
stutzeri RCH2]
Length = 365
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 91/206 (44%), Gaps = 32/206 (15%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP G ++ PY WGT+ IGY K + + AP++ W + PE + ++ ++S
Sbjct: 120 DP-GNQYSIPYMWGTIGIGYNVDKVKAVLGDNAPVDSWDLVFKPENIEKLKSCGVAFLDS 178
Query: 281 PREVIVAG----------GKIAVQQNLALLANQVR----LFDSTHYLKAFGIGDVWVAVG 326
P E++ A GK + L Q+R F S+ Y+ G++ VA+G
Sbjct: 179 PTEMLPAALHYLGYAPDSGKADELKKAEDLFMQIRPHVAYFHSSKYISDLANGNICVAIG 238
Query: 327 WSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPA-ASRLETKQ-IGGQVRGPS 378
+S D+ R NV +PK GA + D+ A+PA A +E+ + P
Sbjct: 239 YSGDIYQGKSRAEEAANGVNVGYKIPKEGAGSFFDMLAVPADAKNVESAHAFINYLMKPD 298
Query: 379 PL--IHQWIEFCLQTARALPFKQEVI 402
+ I +++F A A P E I
Sbjct: 299 VMASITNYVQFPNGNAAATPLLDEAI 324
>gi|428211500|ref|YP_007084644.1| spermidine/putrescine-binding periplasmic protein [Oscillatoria
acuminata PCC 6304]
gi|427999881|gb|AFY80724.1| spermidine/putrescine-binding periplasmic protein [Oscillatoria
acuminata PCC 6304]
Length = 376
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 80/181 (44%), Gaps = 33/181 (18%)
Query: 226 EIDPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPW--WPELAGRISMVNSPRE 283
E DP G ++ P+ WGT + Y ++ P +DW+ W EL+ R++++N RE
Sbjct: 145 EYDP-GNRYSVPFTWGTTGLIYNSARLST----PPDDWEYLWTHQSELSRRLTLMNDVRE 199
Query: 284 VIVAGGKI--------------AVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSS 329
V+ AG + A ++L L + F + + GD+ VA+G+S
Sbjct: 200 VMGAGLRSLGYSYNSTDPAQLRAAYEHLVNLKPALANFTTDGWRDLILAGDLEVAMGFSF 259
Query: 330 DVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGQVRGPSPLIHQWIEFCL 389
D L ++ VVP SG+SLW D IP + V+G + WI F
Sbjct: 260 DALSVSDENPDLEYVVPMSGSSLWTDTMVIP--------RNAPNVQGA----YAWINFMF 307
Query: 390 Q 390
Q
Sbjct: 308 Q 308
>gi|417003430|ref|ZP_11942493.1| putative spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD [Anaerococcus
prevotii ACS-065-V-Col13]
gi|325478622|gb|EGC81734.1| putative spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD [Anaerococcus
prevotii ACS-065-V-Col13]
Length = 359
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 79/186 (42%), Gaps = 36/186 (19%)
Query: 204 DQDWFKRLSHKWKVYLRSNDAGEIDPR---GKIWAAPYRWGTMAIGYKKSKFQNHNLAPI 260
DQ ++L H V L + D +D G ++ PY WGT I Y K+Q + +
Sbjct: 99 DQGLLEKLDHSKIVGLDNIDERFLDVAYDPGNEYSIPYLWGTFGIVYNTKKYQESDFSS- 157
Query: 261 EDWKDPWWPELAGRISMVNSPREVIVAG--------------GKIAVQQNL--------A 298
WK+ W + G I + RE + G + V+ L A
Sbjct: 158 --WKNLWDKKFEGEILSFDGARETLGIGLLANNLSLNTTDPKKLVEVRNELIGFMGNVKA 215
Query: 299 LLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWA 358
+LA+++R++ + + V + +S D A++ N++ +PK G+++W D
Sbjct: 216 ILADEIRMY--------MALEEANVGITFSGDASSAIESNENLSYTIPKEGSNIWFDTMV 267
Query: 359 IPAASR 364
IP S+
Sbjct: 268 IPKTSK 273
>gi|398953666|ref|ZP_10675497.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM33]
gi|398153641|gb|EJM42138.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM33]
Length = 365
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 96/221 (43%), Gaps = 35/221 (15%)
Query: 235 AAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNSPREVIVA 287
A PY WG++ IG+ +K + AP W + PE A + IS ++SP E+I
Sbjct: 126 AIPYMWGSIGIGFNPAKVKEVLGANAPTNSWDLLFKPENAEKLKACGISFLDSPTEMIPT 185
Query: 288 G-----------GKIAVQQNLALLAN---QVRLFDSTHYLKAFGIGDVWVAVGWSSDVLP 333
K + Q AL V F S+ Y+ G++ VAVG+S DVL
Sbjct: 186 ALHYLGYPVNDQDKQHIAQAEALFMKIRPNVAYFHSSKYISDLANGNICVAVGYSGDVLQ 245
Query: 334 AVKRMSN------VAVVVPKSGASLWADLWAIP--AASRLETKQIGGQVRGPSPL--IHQ 383
A R + +PK GA+ + D+ AIP AA+ + P + I
Sbjct: 246 AKARAQEAGDRVKIDYSIPKEGAASFYDMLAIPRDAANVENAYLFMNFLMRPDVIADITN 305
Query: 384 WIEFCLQTARALPFKQEVI---PGASPS-ALESTLVKLPEE 420
I + A A P E I PG+ PS A+ +TL +P++
Sbjct: 306 NIGYSNANAAATPLVDEAIRNDPGSYPSEAVMATLYAVPDQ 346
>gi|440225582|ref|YP_007332673.1| putative putrescine ABC transporter, substrate-binding protein
[Rhizobium tropici CIAT 899]
gi|440037093|gb|AGB70127.1| putative putrescine ABC transporter, substrate-binding protein
[Rhizobium tropici CIAT 899]
Length = 365
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 75/162 (46%), Gaps = 31/162 (19%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQ---NHNLAPIEDWKDPWWPELAGR-----ISMVN 279
DP G +A Y WGT +GY K + + AP D + P+LA + I +++
Sbjct: 121 DP-GNQYAIDYMWGTSGVGYNVDKVKQILGTDDAP--DINVIFDPKLAAKFKDCGIYVLD 177
Query: 280 SPREVIVAGGKI--------------AVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAV 325
SP +VI A + + L + VR F S+ Y+ A GD+ +A
Sbjct: 178 SPTDVIPAALRYLGLDPNSTKQEDFKKAEDLLTAIRPFVRKFHSSEYINALANGDICLAF 237
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPA 361
G+S DVL A R + N+A +P GA +W D+ AIPA
Sbjct: 238 GYSGDVLQARNRAAEAKNGVNIAYSIPTKGAQMWFDVMAIPA 279
>gi|120599867|ref|YP_964441.1| extracellular solute-binding protein [Shewanella sp. W3-18-1]
gi|146292197|ref|YP_001182621.1| extracellular solute-binding protein [Shewanella putrefaciens
CN-32]
gi|386312872|ref|YP_006009037.1| ABC polyamine transporter, periplasmic ligand-binding subunit, PotF
[Shewanella putrefaciens 200]
gi|120559960|gb|ABM25887.1| extracellular solute-binding protein, family 1 [Shewanella sp.
W3-18-1]
gi|145563887|gb|ABP74822.1| extracellular solute-binding protein, family 1 [Shewanella
putrefaciens CN-32]
gi|319425497|gb|ADV53571.1| ABC polyamine transporter, periplasmic ligand-binding subunit, PotF
[Shewanella putrefaciens 200]
Length = 366
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 76/164 (46%), Gaps = 28/164 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYK--KSKFQNHNLAPIEDWKDPWWPELAGRIS-----MVNS 280
DP G +A PY WGT IGY K K AP + + + P+ A +I+ M++S
Sbjct: 121 DP-GNQYAVPYLWGTNGIGYNIDKVKAAVGEDAPFDSMELIFNPKYAEKIAKCGFAMLDS 179
Query: 281 -----PREVIVAG-----GKIAVQQNLALLANQVR----LFDSTHYLKAFGIGDVWVAVG 326
P+ +I G K + L ++R F S+ Y+ GD+ VA G
Sbjct: 180 ADDMVPQAMIYLGLDPNSAKAEDYEKAGELLEKIRPYVTYFHSSRYISDLANGDICVAYG 239
Query: 327 WSSDVLPAVKRM------SNVAVVVPKSGASLWADLWAIPAASR 364
+S DV A R + + +PK GA+LW D+ AIPA ++
Sbjct: 240 FSGDVFQAAARADEAGNGNKIGYSIPKEGANLWFDMLAIPADAK 283
>gi|334706307|ref|ZP_08522173.1| spermidine/putrescine ABC transporter periplasmic
spermidine/putrescine-binding protein [Aeromonas caviae
Ae398]
Length = 359
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 72/162 (44%), Gaps = 27/162 (16%)
Query: 226 EIDPRGKIWAAPYRWGTMAIGYKKSKFQN-HNLAPIEDWKDPWWPELAGRIS-----MVN 279
++DP G +A PY WGT IGY K + + I+ W + PE ++S ++
Sbjct: 113 KVDP-GHQYAVPYLWGTNGIGYNVDKIKEVLGVDKIDSWATIFEPENMKKLSHCGVAFLD 171
Query: 280 SPREVIVAGGKIA--------------VQQNLALLANQVRLFDSTHYLKAFGIGDVWVAV 325
S E+I A ++ L + V F S+ Y+ G++ VA
Sbjct: 172 SADEMIPAALNYLGLNPNSHEPADIKRAEEQLLKVRPYVAYFHSSKYIGDLANGNICVAA 231
Query: 326 GWSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIPA 361
G+S D+L A R +A +PK G +LW D+ AIPA
Sbjct: 232 GFSGDILQAASRAEEAGKGIKIAYSIPKEGGNLWFDMMAIPA 273
>gi|114048491|ref|YP_739041.1| extracellular solute-binding protein [Shewanella sp. MR-7]
gi|113889933|gb|ABI43984.1| extracellular solute-binding protein, family 1 [Shewanella sp.
MR-7]
Length = 387
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 74/161 (45%), Gaps = 28/161 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYK--KSKFQNHNLAPIEDWKDPWWPELAGRIS-----MVNS 280
DP G +A PY WGT IGY K K AP + + + P+ A +IS M++S
Sbjct: 142 DP-GNQYAVPYLWGTNGIGYNIDKVKAAVGEDAPFDSMELIFNPKYAEKISKCGFAMLDS 200
Query: 281 -----PREVIVAG-----GKIAVQQNLALLANQVR----LFDSTHYLKAFGIGDVWVAVG 326
P+ +I G K + L ++R F S+ Y+ GD+ VA G
Sbjct: 201 ADDMVPQAMIYLGLDPNSTKAEDYEKAGELLEKIRPYVTYFHSSRYISDLANGDICVAFG 260
Query: 327 WSSDVLPAVKRM------SNVAVVVPKSGASLWADLWAIPA 361
+S DV A R + + +PK GA+LW D+ AIPA
Sbjct: 261 FSGDVFQAAARADEAGNGNKIGYSIPKEGANLWFDMLAIPA 301
>gi|113971253|ref|YP_735046.1| extracellular solute-binding protein [Shewanella sp. MR-4]
gi|117921535|ref|YP_870727.1| extracellular solute-binding protein [Shewanella sp. ANA-3]
gi|113885937|gb|ABI39989.1| extracellular solute-binding protein, family 1 [Shewanella sp.
MR-4]
gi|117613867|gb|ABK49321.1| extracellular solute-binding protein, family 1 [Shewanella sp.
ANA-3]
Length = 387
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 74/161 (45%), Gaps = 28/161 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYK--KSKFQNHNLAPIEDWKDPWWPELAGRIS-----MVNS 280
DP G +A PY WGT IGY K K AP + + + P+ A +IS M++S
Sbjct: 142 DP-GNQYAVPYLWGTNGIGYNIDKVKAAVGEDAPFDSMELIFNPKYAEKISKCGFAMLDS 200
Query: 281 -----PREVIVAG-----GKIAVQQNLALLANQVR----LFDSTHYLKAFGIGDVWVAVG 326
P+ +I G K + L ++R F S+ Y+ GD+ VA G
Sbjct: 201 ADDMVPQAMIYLGLDPNSTKAEDYEKAGELLEKIRPYVTYFHSSRYISDLANGDICVAFG 260
Query: 327 WSSDVLPAVKRM------SNVAVVVPKSGASLWADLWAIPA 361
+S DV A R + + +PK GA+LW D+ AIPA
Sbjct: 261 FSGDVFQAAARADEAGNGNKIGYSIPKEGANLWFDMLAIPA 301
>gi|26246877|ref|NP_752917.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli CFT073]
gi|227884182|ref|ZP_04001987.1| putrescine ABC superfamily ATP binding cassette transporter
periplasmic substrate-binding protein [Escherichia coli
83972]
gi|300993458|ref|ZP_07180400.1| bacterial extracellular solute-binding protein [Escherichia coli MS
45-1]
gi|301051218|ref|ZP_07198047.1| bacterial extracellular solute-binding protein [Escherichia coli MS
185-1]
gi|386628394|ref|YP_006148114.1| putrescine transporter subunit [Escherichia coli str. 'clone D i2']
gi|386633314|ref|YP_006153033.1| putrescine transporter subunit [Escherichia coli str. 'clone D
i14']
gi|422364764|ref|ZP_16445275.1| bacterial extracellular solute-binding protein [Escherichia coli MS
153-1]
gi|26107277|gb|AAN79460.1|AE016758_64 Putrescine-binding periplasmic protein precursor [Escherichia coli
CFT073]
gi|227838934|gb|EEJ49400.1| putrescine ABC superfamily ATP binding cassette transporter
periplasmic substrate-binding protein [Escherichia coli
83972]
gi|300297125|gb|EFJ53510.1| bacterial extracellular solute-binding protein [Escherichia coli MS
185-1]
gi|300406572|gb|EFJ90110.1| bacterial extracellular solute-binding protein [Escherichia coli MS
45-1]
gi|315292529|gb|EFU51881.1| bacterial extracellular solute-binding protein [Escherichia coli MS
153-1]
gi|355419293|gb|AER83490.1| putrescine transporter subunit [Escherichia coli str. 'clone D i2']
gi|355424213|gb|AER88409.1| putrescine transporter subunit [Escherichia coli str. 'clone D
i14']
Length = 418
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 74/166 (44%), Gaps = 31/166 (18%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQ---NHNLAPIEDWKDPWWPELAGR-----ISMVN 279
DP K +A PY W T IGY K + N AP++ W PE + +S ++
Sbjct: 172 DPDNK-FAMPYMWATTGIGYNVDKVKAVLGEN-APVDSWDLILKPENLEKLKSCGVSFLD 229
Query: 280 SPREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVA 324
+P EV A +L L L +R F S+ Y+ GD+ VA
Sbjct: 230 APEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVA 289
Query: 325 VGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
+GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 290 IGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 335
>gi|388468123|ref|ZP_10142333.1| periplasmic putrescine-binding protein [Pseudomonas synxantha
BG33R]
gi|388011703|gb|EIK72890.1| periplasmic putrescine-binding protein [Pseudomonas synxantha
BG33R]
Length = 366
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 77/180 (42%), Gaps = 32/180 (17%)
Query: 208 FKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIGYKKSKF-QNHNLAPIEDWKDP 266
FK L + L ND G + PY WGT IGY K Q + I+ W
Sbjct: 107 FKNLDPRLLKLLEQNDPGNAH------SVPYLWGTNGIGYNVDKVKQVLGIERIDSWAVL 160
Query: 267 WWPELAGR-----ISMVNSPREVIVA----GGKIAVQQN----------LALLANQVRLF 307
+ P+ + ++ ++SP E+ A GK +N L L + F
Sbjct: 161 FEPDNLKKLHECGVAFLDSPDELFPAILNYMGKDPRSENAEDYKQAEAKLLTLRPYITYF 220
Query: 308 DSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPA 361
S+ Y+ G++ VA G+S DV A R N+A +P+ G++LW DL AIPA
Sbjct: 221 HSSKYISDLANGNICVAFGYSGDVFQAANRAKEAKNGVNIAYSIPREGSNLWFDLLAIPA 280
>gi|398983481|ref|ZP_10690058.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM24]
gi|399013788|ref|ZP_10716090.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM16]
gi|398112689|gb|EJM02545.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM16]
gi|398157207|gb|EJM45608.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM24]
Length = 365
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 73/167 (43%), Gaps = 37/167 (22%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN-HNLAPIEDWKDPWWPELAGR-----ISMVNSP 281
DP G ++A PY WGT IGY K + + I+ W + PE + ++ ++S
Sbjct: 121 DP-GNLYAVPYLWGTNGIGYNVDKVKAVLGVDKIDSWGVLFEPENIKKLQSCGVAFLDSA 179
Query: 282 REVIVAGGKIAVQQNLALLANQ-------------------VRLFDSTHYLKAFGIGDVW 322
E++ V L L AN V F S+ Y+ GD+
Sbjct: 180 DEMMPT-----VLNYLGLNANSTNPKDYEKATDKLLAVRPYVTYFHSSKYIGDLANGDIC 234
Query: 323 VAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAAS 363
VA+G+S D+ A R + N+A VPK G +LW D+ AIP S
Sbjct: 235 VAIGFSGDIFQAKNRAAEAKKGVNIAYAVPKEGGALWFDMLAIPKDS 281
>gi|217965101|ref|YP_002350779.1| spermidine/putrescine ABC transporter substrate-binding protein
[Listeria monocytogenes HCC23]
gi|386007529|ref|YP_005925807.1| spermidine/putrescine ABC transporter (substrate-binding protein)
[Listeria monocytogenes L99]
gi|386026122|ref|YP_005946898.1| putative spermidine/putrescine uptake ABC transporter, substrate
binding protein [Listeria monocytogenes M7]
gi|217334371|gb|ACK40165.1| ABC transporter spermidine/putrescine binding protein [Listeria
monocytogenes HCC23]
gi|307570339|emb|CAR83518.1| spermidine/putrescine ABC transporter (substrate-binding protein)
[Listeria monocytogenes L99]
gi|336022703|gb|AEH91840.1| putative spermidine/putrescine uptake ABC transporter, substrate
binding protein [Listeria monocytogenes M7]
Length = 357
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 91/203 (44%), Gaps = 34/203 (16%)
Query: 234 WAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVIVAG----G 289
++ PY WGT+ I Y K F N N + W + PEL +I +++ REV+ G G
Sbjct: 132 YSMPYFWGTLGIIYNKEMFPNKNF---DTWNALFDPELKNQILLIDGAREVMGLGLNSLG 188
Query: 290 KIAVQQNLA-LLANQVRLFDSTHYLKAFGIGD----------VWVAVGWSSDVLPAVKRM 338
N A L A + +L T +KA +GD VAV +S + +
Sbjct: 189 YSLNDTNKAHLQAARDKLETMTPNVKAI-VGDEIKLLMADNEAGVAVTFSGEAAEMLSEN 247
Query: 339 SNVAVVVPKSGASLWADLWAIPAASRLETKQIGGQVRGPSPLIHQWIEFCLQTARALPFK 398
++ V+PK G++LW D IP + K + G H++I F L+ A
Sbjct: 248 EDLEYVIPKDGSNLWFDNMVIPKTA----KNVDGA--------HKFINFMLKPENA-AIN 294
Query: 399 QEVIPGASPSALESTLVKLPEEL 421
E + A+P+ E + LP+E+
Sbjct: 295 AEYVGYATPN--EKAVQLLPKEI 315
>gi|254500570|ref|ZP_05112721.1| Bacterial extracellular solute-binding protein, putative [Labrenzia
alexandrii DFL-11]
gi|222436641|gb|EEE43320.1| Bacterial extracellular solute-binding protein, putative [Labrenzia
alexandrii DFL-11]
Length = 359
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 75/158 (47%), Gaps = 27/158 (17%)
Query: 234 WAAPYRWGTMAIGY--KKSKFQNHNLAPIEDWKDPWWPELAGR-----ISMVNSPREVIV 286
++ Y WGT +GY +K K AP++ W + PE A + I ++++P E+
Sbjct: 119 YSINYMWGTTGLGYNVEKVKAALGEDAPVDSWDLLFKPENAAKLQECGIHVLDAPTELFP 178
Query: 287 AGGKI-----------AVQQNLALLAN---QVRLFDSTHYLKAFGIGDVWVAVGWSSDVL 332
A +++ LL + V+ F S+ Y+ A GD+ +AVGWS DVL
Sbjct: 179 AALNYLGLDPDSKDTGDIEKATELLKSVRPYVQKFHSSEYINALANGDICLAVGWSGDVL 238
Query: 333 PAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
A R + V +PK GA +W D AIPA ++
Sbjct: 239 QARDRAAEADNGVTVEYAIPKEGALMWFDQMAIPADAK 276
>gi|432464817|ref|ZP_19706923.1| putrescine-binding periplasmic protein [Escherichia coli KTE205]
gi|432582913|ref|ZP_19819323.1| putrescine-binding periplasmic protein [Escherichia coli KTE57]
gi|433071904|ref|ZP_20258598.1| putrescine-binding periplasmic protein [Escherichia coli KTE129]
gi|433119402|ref|ZP_20305109.1| putrescine-binding periplasmic protein [Escherichia coli KTE157]
gi|433182391|ref|ZP_20366686.1| putrescine-binding periplasmic protein [Escherichia coli KTE85]
gi|430996623|gb|ELD12899.1| putrescine-binding periplasmic protein [Escherichia coli KTE205]
gi|431119929|gb|ELE22928.1| putrescine-binding periplasmic protein [Escherichia coli KTE57]
gi|431592074|gb|ELI62980.1| putrescine-binding periplasmic protein [Escherichia coli KTE129]
gi|431648264|gb|ELJ15663.1| putrescine-binding periplasmic protein [Escherichia coli KTE157]
gi|431711030|gb|ELJ75392.1| putrescine-binding periplasmic protein [Escherichia coli KTE85]
Length = 370
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 74/165 (44%), Gaps = 29/165 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP K +A PY W T IGY K + AP++ W PE + +S +++
Sbjct: 124 DPDNK-FAMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDA 182
Query: 281 PREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAV 325
P EV A +L L L +R F S+ Y+ GD+ VA+
Sbjct: 183 PEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 242
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
GW+ DV A R NV+ +PK GA ++ D++A+PA ++
Sbjct: 243 GWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMVFFDVFAMPADAK 287
>gi|91209888|ref|YP_539874.1| putrescine ABC transporter substrate-binding protein [Escherichia
coli UTI89]
gi|117623034|ref|YP_851947.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
coli APEC O1]
gi|237707182|ref|ZP_04537663.1| putrescine-binding periplasmic protein [Escherichia sp. 3_2_53FAA]
gi|300991852|ref|ZP_07179677.1| bacterial extracellular solute-binding protein [Escherichia coli MS
200-1]
gi|331646122|ref|ZP_08347225.1| putrescine-binding periplasmic protein [Escherichia coli M605]
gi|422358904|ref|ZP_16439553.1| bacterial extracellular solute-binding protein [Escherichia coli MS
110-3]
gi|422368868|ref|ZP_16449272.1| bacterial extracellular solute-binding protein [Escherichia coli MS
16-3]
gi|422375650|ref|ZP_16455913.1| bacterial extracellular solute-binding protein [Escherichia coli MS
60-1]
gi|422378970|ref|ZP_16459173.1| bacterial extracellular solute-binding protein [Escherichia coli MS
57-2]
gi|91071462|gb|ABE06343.1| putrescine-binding periplasmic protein precursor [Escherichia coli
UTI89]
gi|115512158|gb|ABJ00233.1| putrescine-binding periplasmic protein precursor [Escherichia coli
APEC O1]
gi|226898392|gb|EEH84651.1| putrescine-binding periplasmic protein [Escherichia sp. 3_2_53FAA]
gi|300305462|gb|EFJ59982.1| bacterial extracellular solute-binding protein [Escherichia coli MS
200-1]
gi|315287314|gb|EFU46725.1| bacterial extracellular solute-binding protein [Escherichia coli MS
110-3]
gi|315299397|gb|EFU58649.1| bacterial extracellular solute-binding protein [Escherichia coli MS
16-3]
gi|324009780|gb|EGB78999.1| bacterial extracellular solute-binding protein [Escherichia coli MS
57-2]
gi|324013016|gb|EGB82235.1| bacterial extracellular solute-binding protein [Escherichia coli MS
60-1]
gi|331044874|gb|EGI17001.1| putrescine-binding periplasmic protein [Escherichia coli M605]
Length = 418
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 74/166 (44%), Gaps = 31/166 (18%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQ---NHNLAPIEDWKDPWWPELAGR-----ISMVN 279
DP K +A PY W T IGY K + N AP++ W PE + +S ++
Sbjct: 172 DPDNK-FAMPYMWATTGIGYNVDKVKAVLGEN-APVDSWDLILKPENLEKLKSCGVSFLD 229
Query: 280 SPREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVA 324
+P EV A +L L L +R F S+ Y+ GD+ VA
Sbjct: 230 APEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVA 289
Query: 325 VGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
+GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 290 IGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 335
>gi|432830829|ref|ZP_20064412.1| putrescine-binding periplasmic protein [Escherichia coli KTE135]
gi|431379670|gb|ELG64599.1| putrescine-binding periplasmic protein [Escherichia coli KTE135]
Length = 370
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 75/166 (45%), Gaps = 31/166 (18%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQ---NHNLAPIEDWKDPWWPELAGR-----ISMVN 279
DP K +A PY W T IGY K + N AP++ W PE + +S ++
Sbjct: 124 DPDNK-FAMPYMWATTGIGYNVDKVKAVLGEN-APVDSWDLILKPENLEKLKSCGVSFLD 181
Query: 280 SPREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVA 324
+P EV A +L L L +R F S+ Y+ GD+ VA
Sbjct: 182 APEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVA 241
Query: 325 VGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
+GW+ DV A R NV+ ++PK GA + D++A+PA ++
Sbjct: 242 IGWAGDVWQASNRAKEAKNGVNVSFLIPKEGAMAFFDVFAMPADAK 287
>gi|399008900|ref|ZP_10711351.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM17]
gi|398114411|gb|EJM04232.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM17]
Length = 362
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 70/160 (43%), Gaps = 27/160 (16%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKF-QNHNLAPIEDWKDPWWPELAGR-----ISMVNSP 281
DP G ++ PY WGT IGY K Q + I+ W + PE + +SM++SP
Sbjct: 118 DP-GNQYSVPYLWGTNGIGYNVDKVKQVLGIDSIDSWAVFFEPENLKKLSQCGVSMMDSP 176
Query: 282 REVIVA--------------GGKIAVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGW 327
EV A + L + + F S+ Y+ G++ +A G+
Sbjct: 177 DEVFPAVLNYMGLDPRSENPADYKKAEAKLLAIRPYITYFHSSKYVSDLANGNICLAFGY 236
Query: 328 SSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIPA 361
S DV A R +A +PK G++LW DL AIPA
Sbjct: 237 SGDVFQAANRAKEAKNGVKIAYSIPKEGSNLWFDLLAIPA 276
>gi|88861147|ref|ZP_01135781.1| periplasmic putrescine-binding protein [Pseudoalteromonas tunicata
D2]
gi|88816869|gb|EAR26690.1| periplasmic putrescine-binding protein [Pseudoalteromonas tunicata
D2]
Length = 365
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 72/155 (46%), Gaps = 27/155 (17%)
Query: 237 PYRWGTMAIGY--KKSKFQNHNLAPIEDWKDPWWPELAGR-----ISMVNSPREVIVA-- 287
PY WGT IGY KK K + P++ WK + P + + +S+++ EV A
Sbjct: 128 PYMWGTTGIGYNVKKVKEILGDDMPLDTWKLVFDPVIVQKLSVCGVSLMDDATEVFAAVR 187
Query: 288 ---------GGKIAVQQNLALLAN---QVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAV 335
K AV + ++ ++ F S+ Y+ GD VA G+S D+L A
Sbjct: 188 AYSGSDPADFSKKAVTEAAEIVKAVRPHIKYFHSSQYINDLANGDSCVAHGYSGDLLQAR 247
Query: 336 KRMSN------VAVVVPKSGASLWADLWAIPAASR 364
R + VA VVP GA +W D+ AIPA S+
Sbjct: 248 DRAAEANNGVEVAYVVPSEGAVVWTDVMAIPADSK 282
>gi|209918103|ref|YP_002292187.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli SE11]
gi|417144631|ref|ZP_11986437.1| putrescine-binding periplasmic protein [Escherichia coli 1.2264]
gi|417152559|ref|ZP_11991350.1| putrescine-binding periplasmic protein [Escherichia coli 96.0497]
gi|417580120|ref|ZP_12230937.1| putrescine-binding periplasmic protein [Escherichia coli STEC_B2F1]
gi|433091183|ref|ZP_20277478.1| putrescine-binding periplasmic protein [Escherichia coli KTE138]
gi|209911362|dbj|BAG76436.1| putrescine ABC transporter substrate binding component [Escherichia
coli SE11]
gi|345342465|gb|EGW74859.1| putrescine-binding periplasmic protein [Escherichia coli STEC_B2F1]
gi|386164514|gb|EIH26300.1| putrescine-binding periplasmic protein [Escherichia coli 1.2264]
gi|386169283|gb|EIH35791.1| putrescine-binding periplasmic protein [Escherichia coli 96.0497]
gi|431613376|gb|ELI82573.1| putrescine-binding periplasmic protein [Escherichia coli KTE138]
Length = 370
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 74/165 (44%), Gaps = 29/165 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP K +A PY W T IGY K + AP++ W PE + +S +++
Sbjct: 124 DPDNK-FAMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDA 182
Query: 281 PREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAV 325
P EV A +L L L +R F S+ Y+ GD+ VA+
Sbjct: 183 PEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 242
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
GW+ DV A R NV+ ++PK GA + D++A+PA ++
Sbjct: 243 GWAGDVWQASNRAKEAKNGVNVSFLIPKEGAMAFFDVFAMPADAK 287
>gi|421497340|ref|ZP_15944512.1| spermidine/putrescine ABC transporter periplasmic
spermidine/putrescine-binding protein [Aeromonas media
WS]
gi|407183686|gb|EKE57571.1| spermidine/putrescine ABC transporter periplasmic
spermidine/putrescine-binding protein [Aeromonas media
WS]
Length = 361
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 72/162 (44%), Gaps = 27/162 (16%)
Query: 226 EIDPRGKIWAAPYRWGTMAIGYKKSKFQN-HNLAPIEDWKDPWWPELAGRIS-----MVN 279
++DP G +A PY WGT IGY K + + I+ W + PE ++S ++
Sbjct: 115 KVDP-GHQYAVPYLWGTNGIGYNVEKVKAVLGVDKIDSWATIFEPENMKKLSHCGVAFLD 173
Query: 280 SPREVIVAGGKIA--------------VQQNLALLANQVRLFDSTHYLKAFGIGDVWVAV 325
S E+I A ++ L + V F S+ Y+ GD+ VA
Sbjct: 174 SADEMIPAALNYLGLNPNSHDPADLKRAEEQLLKVRPYVTYFHSSKYIGDLANGDICVAA 233
Query: 326 GWSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIPA 361
G+S D+L A R +A +PK G +LW D+ AIP+
Sbjct: 234 GFSGDILQAAARADEAGKGIKIAYSIPKEGGNLWFDMMAIPS 275
>gi|387813512|ref|YP_005428994.1| putrescine ABC transporter periplasmic-binding protein
[Marinobacter hydrocarbonoclasticus ATCC 49840]
gi|381338524|emb|CCG94571.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Marinobacter hydrocarbonoclasticus ATCC
49840]
Length = 368
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 79/174 (45%), Gaps = 44/174 (25%)
Query: 226 EIDPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-------IS 276
++DP G ++ PY WGT GY + + Q + AP + W + PE+ G+ I+
Sbjct: 119 KVDP-GSQFSLPYLWGTNGYGYNEGRIQEILGDTAPTDSWALVFDPEVTGKLAAGGCGIA 177
Query: 277 MVNSPREVIVA-------------------GGKI--AVQQNLALLANQVRLFDSTHYLKA 315
M++S E++ A GG++ AV+ N + F S+ Y+
Sbjct: 178 MLDSGEEMVRAAMAYIGLDPNSNNADDIKKGGEVIKAVRPN-------ITYFHSSRYIGD 230
Query: 316 FGIGDVWVAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIPAAS 363
GD+ VA G+S D+L A R + +PK GA LW D+ IPA +
Sbjct: 231 LANGDLCVAAGYSGDILQAAARAEEAENGNVIRYTIPKEGAVLWFDMMTIPAGA 284
>gi|388543373|ref|ZP_10146664.1| extracellular solute-binding protein [Pseudomonas sp. M47T1]
gi|388278685|gb|EIK98256.1| extracellular solute-binding protein [Pseudomonas sp. M47T1]
Length = 362
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 75/179 (41%), Gaps = 32/179 (17%)
Query: 209 KRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIGYKKSKFQN-HNLAPIEDWKDPW 267
K L K L ND G + PY WGT IGY K + + I+ W +
Sbjct: 104 KNLDPKLMALLEKNDPGNEH------SVPYLWGTNGIGYNVDKVKEVLGVDHIDSWAVLF 157
Query: 268 WPELAGR-----ISMVNSPREVIVA--------------GGKIAVQQNLALLANQVRLFD 308
PE + +SM++S EV+ A V+ L + V F
Sbjct: 158 EPENMKKLSKCGVSMMDSADEVMPAVLNYMGMDPRSSKPEDYAKVKAKLKAVRPYVTYFH 217
Query: 309 STHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPA 361
S+ Y+ G++ VA G+S DV A R ++A +PK GA+LW DL AIPA
Sbjct: 218 SSKYVSDLANGNICVAFGYSGDVFQAANRAKEAKNGIHIAYAIPKEGANLWFDLLAIPA 276
>gi|251789985|ref|YP_003004706.1| putrescine ABC transporter subunit periplasmic-binding protein
[Dickeya zeae Ech1591]
gi|247538606|gb|ACT07227.1| extracellular solute-binding protein family 1 [Dickeya zeae
Ech1591]
Length = 369
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 73/168 (43%), Gaps = 31/168 (18%)
Query: 226 EIDPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMV 278
E DP G +A PY W T IGY K + AP+ W PE + +S +
Sbjct: 121 EHDP-GHKYAVPYLWATTGIGYNVDKVKAVLGKDAPVNSWDLVLKPENLEKLKSCGVSFL 179
Query: 279 NSPREVIVA----------------GGKIAVQQNLALLANQVRLFDSTHYLKAFGIGDVW 322
++P E+ K A L L N +R F S+ Y+ GD+
Sbjct: 180 DAPAEIYATVLNYQGKNPNSATEADYTKDATDLLLKLRPN-IRYFHSSQYINDLANGDIC 238
Query: 323 VAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
VA+GW+ DV+ A R N++ +PK GA + D++AIP ++
Sbjct: 239 VAIGWAGDVMQAANRAKEAKNGVNISYSIPKEGALAFFDVFAIPKDAK 286
>gi|22126728|ref|NP_670151.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Yersinia pestis KIM10+]
gi|45441089|ref|NP_992628.1| putrescine ABC transporter periplasmic-binding protein [Yersinia
pestis biovar Microtus str. 91001]
gi|21959748|gb|AAM86402.1|AE013887_9 periplasmic putrescine-binding protein of putrescine ABC
transporter [Yersinia pestis KIM10+]
gi|45435948|gb|AAS61505.1| putrescine-binding periplasmic protein precursor [Yersinia pestis
biovar Microtus str. 91001]
Length = 408
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 72/165 (43%), Gaps = 29/165 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP K +A PY W T IGY K + AP+ W PE + +S +++
Sbjct: 162 DPDNK-YAIPYLWATTGIGYNVEKVKAVLGEDAPVNSWDLVLKPENLEKLKSCGVSFLDA 220
Query: 281 PREVIVAG-GKIAVQQNLALLAN--------------QVRLFDSTHYLKAFGIGDVWVAV 325
P E+ + N L A+ +R F S+ Y+ GD+ VAV
Sbjct: 221 PSEIFATVLNYLGKDPNSTLTADYTGSATDLLLKLRPNIRYFHSSQYINDLANGDICVAV 280
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
GW+ D++ A R NVA +PK GA + D++A+P ++
Sbjct: 281 GWAGDIMQASNRAKEAKNGVNVAYSIPKEGALAFFDVFAMPTDAK 325
>gi|113461191|ref|YP_719260.1| spermidine/putrescine-binding periplasmic protein [Haemophilus
somnus 129PT]
gi|112823234|gb|ABI25323.1| spermidine/putrescine-binding periplasmic protein [Haemophilus
somnus 129PT]
Length = 345
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 92/222 (41%), Gaps = 40/222 (18%)
Query: 226 EIDP--------RGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISM 277
E+DP +G ++ P +G IGY N N ++ W D W PE A ++ M
Sbjct: 106 ELDPNMLDRPFDKGNKYSLPQLFGATGIGYNAD---NQNPEHLQSWGDLWNPEFANKLQM 162
Query: 278 VNSPREVI-VAGGKIA-------------VQQNLALLANQVRLFDSTHYLKAFGIGDVWV 323
++ PRE+ +A K+ Q L L + +F+S + F G+ V
Sbjct: 163 LDDPRELFNIALLKMGENPNTQDPKVIEKAYQELLKLRPNILVFNSDNPANTFITGETDV 222
Query: 324 AVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGQVRGPSPLIHQ 383
+ W+ + A + +V PK G LW D AIPA ++ V LI+
Sbjct: 223 GLIWNGSIRVAQNAGVPIKIVYPKEGTMLWIDNLAIPATAK--------NVESAYKLINY 274
Query: 384 WIEFCLQTARALPFKQEVIPGASPSALESTLVKLPEELLKGK 425
+ + L P ++ +ALE +LP+EL + K
Sbjct: 275 LLSADVSETLTLEIG---YPTSNLNALE----RLPKELTENK 309
>gi|319787664|ref|YP_004147139.1| family 1 extracellular solute-binding protein [Pseudoxanthomonas
suwonensis 11-1]
gi|317466176|gb|ADV27908.1| extracellular solute-binding protein family 1 [Pseudoxanthomonas
suwonensis 11-1]
Length = 375
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 74/166 (44%), Gaps = 32/166 (19%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSK----FQNHNLAPIEDWKDPWWPELAGRIS-----MV 278
DP G ++ PY WGT +GY K F +A W + PE R++ ++
Sbjct: 130 DP-GNQYSIPYLWGTTGLGYNVDKVTEAFGGTEVA--NSWDLLFKPENVSRLAHCGVMIL 186
Query: 279 NSPREVIVAGGKI-----------AVQQNLALLAN---QVRLFDSTHYLKAFGIGDVWVA 324
++P E I A +++ ALLA +R F S+ Y+ A G +
Sbjct: 187 DTPTEAIPAALNYLGEDPNSTDPEVIRKGAALLAKIRPHIRSFHSSQYIDALANGSACLV 246
Query: 325 VGWSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIPAASR 364
+GWS DVL A R VA +PK GA L+ D+ AIP +R
Sbjct: 247 MGWSGDVLQARDRADEAGNGVKVAYSIPKEGAPLFVDMLAIPKDAR 292
>gi|294852922|ref|ZP_06793595.1| putrescine transport system substrate-binding protein [Brucella sp.
NVSL 07-0026]
gi|294821511|gb|EFG38510.1| putrescine transport system substrate-binding protein [Brucella sp.
NVSL 07-0026]
Length = 369
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 111/271 (40%), Gaps = 43/271 (15%)
Query: 131 TYALTVPLRVVSLQN---SVPQSWVKDFMRSQGKRLKFQMNLCASI-------DGIVNNL 180
T++ RVV++ N + S +KDF + G ++ + + I G +L
Sbjct: 22 TFSAGAQERVVNIYNWSDYIDDSILKDFTKETGIKVVYDVYDSNEILETKLLAGGSGYDL 81
Query: 181 STPFNKLSFAIKKRFIEPIAEAEDQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRW 240
P + + ++ + D+D L + W S A DP G + Y W
Sbjct: 82 VVPSGEF---LGRQIPAGVFLKLDKDKLPNLKNMWDEI--STRAATYDP-GNEYFVNYMW 135
Query: 241 GTMAIGYKKSKFQNH-NLAPIEDWKDPWWPELAGR-----ISMVNSPREVIVAG------ 288
GT IGY K+K + I+ W + PE + I +++S E++
Sbjct: 136 GTTGIGYNKAKIKEALGTDTIDSWDVLFDPEKTAKLKDCGIYLLDSASEMLRPALNYLGL 195
Query: 289 -------GKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS- 339
+ Q+L L + +R F S+ Y+ A GD+ +AVG+S D+ A R
Sbjct: 196 DPNSPSPDDLQKAQDLYLKIRPNIRKFHSSEYINALANGDICMAVGYSGDIFQARDRAEK 255
Query: 340 ------NVAVVVPKSGASLWADLWAIPAASR 364
+ +PK GA +W D AIPA ++
Sbjct: 256 AKQEGVEIGYSIPKEGALIWFDQMAIPADAK 286
>gi|238893913|ref|YP_002918647.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
NTUH-K2044]
gi|238546229|dbj|BAH62580.1| spermidine/putrescine transport system periplasmic
substrate-binding component [Klebsiella pneumoniae
subsp. pneumoniae NTUH-K2044]
Length = 376
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 73/165 (44%), Gaps = 29/165 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP K +A PY W T IGY K + AP++ W PE + +S +++
Sbjct: 130 DPENK-YAMPYLWATTGIGYNVDKVKAVLGKDAPVDSWDLVLKPENLEKLKSCGVSFLDA 188
Query: 281 PREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAV 325
P E+ A +L L L +R F S+ Y+ GD+ VA+
Sbjct: 189 PEEIFATVLNYLGKDPNSSKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 248
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 249 GWAGDVWQAANRAKEAKNGVNVSYFIPKEGALAFFDVFAMPADAK 293
>gi|422800217|ref|ZP_16848715.1| extracellular solute-binding protein [Escherichia coli M863]
gi|323967289|gb|EGB62712.1| extracellular solute-binding protein [Escherichia coli M863]
Length = 395
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 74/166 (44%), Gaps = 31/166 (18%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQ---NHNLAPIEDWKDPWWPELAGR-----ISMVN 279
DP K +A PY W T IGY K + N AP++ W PE + +S ++
Sbjct: 149 DPDNK-FAMPYMWATTGIGYNVDKVKAVLGEN-APVDSWDLILKPENLEKLKSCGVSFLD 206
Query: 280 SPREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVA 324
+P EV A +L L L +R F S+ Y+ GD+ VA
Sbjct: 207 APEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVA 266
Query: 325 VGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
+GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 267 IGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 312
>gi|406707040|ref|YP_006757392.1| extracellular solute-binding protein [alpha proteobacterium HIMB59]
gi|406652816|gb|AFS48215.1| extracellular solute-binding protein [alpha proteobacterium HIMB59]
Length = 354
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 74/157 (47%), Gaps = 22/157 (14%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGR-----ISMVNSPR 282
DP G+ ++ Y +GT IGY + + +E W + P+ + ++M+++P
Sbjct: 114 DPGGE-YSVNYMYGTTGIGYNVAAVEERG-GDVESWDIIFNPDEISKYADCGVAMLDAPS 171
Query: 283 EVIVAG-----------GKIAVQQNLALLAN---QVRLFDSTHYLKAFGIGDVWVAVGWS 328
EV+ A ++ L LL ++ FDS+ Y+ G++ +AVGWS
Sbjct: 172 EVVEIALNYLGYDPNTENTKANEEALELLKQIRPYIKYFDSSQYIDDLANGEICLAVGWS 231
Query: 329 SDV-LPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 364
DV + A + + V +P G +W D+ IPA ++
Sbjct: 232 GDVFIAAYEEIEEVWYSIPNEGTVIWFDMMGIPADAK 268
>gi|338974023|ref|ZP_08629385.1| putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Bradyrhizobiaceae bacterium SG-6C]
gi|338232750|gb|EGP07878.1| putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Bradyrhizobiaceae bacterium SG-6C]
Length = 370
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 75/164 (45%), Gaps = 28/164 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP G +AA Y WGT IGY K Q A ++ W + PE + I M++S
Sbjct: 125 DP-GNAFAANYMWGTTGIGYNVKKVQEIIGPEAKLDSWSAVFVPENLAKFKDCGIHMLDS 183
Query: 281 PREVIVAG----------GKIAVQQNLALLANQVR----LFDSTHYLKAFGIGDVWVAVG 326
+++ A K A + A L ++VR F S+ YL A G++ VG
Sbjct: 184 ADDILPAALNYLGLDPNSTKQADLEKAAELVSKVRPYVRKFHSSEYLNALATGEICFVVG 243
Query: 327 WSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
WS D+ A R + + +PK GA ++ D +AIPA ++
Sbjct: 244 WSGDIKQAQSRAAEAKNGVEIGYTIPKEGAQMFFDNFAIPADAK 287
>gi|308048910|ref|YP_003912476.1| extracellular solute-binding protein [Ferrimonas balearica DSM
9799]
gi|307631100|gb|ADN75402.1| extracellular solute-binding protein family 1 [Ferrimonas balearica
DSM 9799]
Length = 345
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 95/220 (43%), Gaps = 41/220 (18%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVIVA 287
DP+ ++ PY WG+ AIG + + A I WKD W P+ + + N REV
Sbjct: 116 DPK-NTYSIPYVWGSTAIGVNADEI---DPATITSWKDLWDPKWQRSLLLTNDVREVFHM 171
Query: 288 GGKI-----------AVQQNLALLAN---QVRLFDSTHYLKAFGIGDVWVAVGWSSDVLP 333
+I ++Q LL + V +F+S + F GDV + + W+ +
Sbjct: 172 ALRINGHSGNSTDPEEIKQAYELLRSLMPNVLVFNSDAPREPFLAGDVNLGMLWNGEAFM 231
Query: 334 AVKRMSNVAVVVPKSGASLWADLWAIPA-ASRLETKQIGGQVRGPSPLIHQWIEFCL--- 389
A + + + PK GA+LW D +AIP A+ +E H++I+F +
Sbjct: 232 AQQEEEAIQYIYPKEGAALWVDSFAIPVNAANVENA-------------HKFIDFMMRPE 278
Query: 390 ---QTARALPF---KQEVIPGASPSALESTLVKLPEELLK 423
Q L + + I P E+T + PEE++K
Sbjct: 279 IAVQVVEYLGYTTPNETAIGMLDPEYSENTAIFPPEEVVK 318
>gi|403058135|ref|YP_006646352.1| Putrescine-binding periplasmic protein [Pectobacterium carotovorum
subsp. carotovorum PCC21]
gi|402805461|gb|AFR03099.1| Putrescine-binding periplasmic protein [Pectobacterium carotovorum
subsp. carotovorum PCC21]
Length = 369
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 72/165 (43%), Gaps = 29/165 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGY--KKSKFQNHNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP K +A PY W T IGY +K K AP++ W PE + +S +++
Sbjct: 123 DPENK-YALPYLWATTGIGYNVEKVKAALGADAPVDSWDLVLKPENLEKLKSCGVSFLDA 181
Query: 281 PREVIVA--------------GGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAV 325
P E+ G +L L L +R F S+ Y+ GD+ VAV
Sbjct: 182 PEEIFATVLNYQGKDPNSTKPGDYTTSATDLLLKLRPSIRYFHSSQYINDLANGDICVAV 241
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
GW+ D+L A R N+ +PK GA + D+ AIP ++
Sbjct: 242 GWAGDILQAGNRAKEAKNGVNIQYSIPKEGALAFFDVLAIPKDAK 286
>gi|398867950|ref|ZP_10623384.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM78]
gi|398235202|gb|EJN21041.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM78]
Length = 365
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 96/221 (43%), Gaps = 35/221 (15%)
Query: 235 AAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNSPREVIVA 287
A PY WG++ IG+ K + AP W + PE A + IS ++SP E+I A
Sbjct: 126 AFPYMWGSIGIGFNPQKVKEVLGTNAPTNSWDLLFKPENAEKLKACGISFLDSPTEMIPA 185
Query: 288 G----GKIAVQQNLALLAN----------QVRLFDSTHYLKAFGIGDVWVAVGWSSDVLP 333
G Q+ A +A V F S+ Y+ G++ VAVG+S DVL
Sbjct: 186 ALHYLGYPVNDQDKAHIAEAEALFMKIRPSVAYFHSSKYISDLANGNICVAVGYSGDVLQ 245
Query: 334 AVKRMSN------VAVVVPKSGASLWADLWAIP-AASRLETKQIGGQVRGPSPLIHQW-- 384
A R + +PK GA + D+ AIP A+ +E + +I +
Sbjct: 246 AKARAEEAGDKVKIDYSIPKEGAGSFYDMVAIPRDAANVENAYLFMNFLMRPDIIAEITN 305
Query: 385 -IEFCLQTARALPFKQEVI---PGAS-PSALESTLVKLPEE 420
I + A A P E I PG+ P A+ +TL +P++
Sbjct: 306 NIGYSNANAAATPLVDEAIRNDPGSYPPEAVMATLYAIPDQ 346
>gi|227112035|ref|ZP_03825691.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Pectobacterium carotovorum subsp.
brasiliensis PBR1692]
gi|253688079|ref|YP_003017269.1| family 1 extracellular solute-binding protein [Pectobacterium
carotovorum subsp. carotovorum PC1]
gi|251754657|gb|ACT12733.1| extracellular solute-binding protein family 1 [Pectobacterium
carotovorum subsp. carotovorum PC1]
Length = 369
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 72/165 (43%), Gaps = 29/165 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGY--KKSKFQNHNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP K +A PY W T IGY +K K AP++ W PE + +S +++
Sbjct: 123 DPENK-YALPYLWATTGIGYNVEKVKAALGADAPVDSWDLVLKPENLEKLKSCGVSFLDA 181
Query: 281 PREVIVA--------------GGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAV 325
P E+ G +L L L +R F S+ Y+ GD+ VAV
Sbjct: 182 PEEIFATVLNYQGKDPNSTKPGDYTTSATDLLLKLRPSIRYFHSSQYINDLANGDICVAV 241
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
GW+ D+L A R N+ +PK GA + D+ AIP ++
Sbjct: 242 GWAGDILQAGNRAKEAKNGVNIQYSIPKEGALAFFDVLAIPKDAK 286
>gi|397688814|ref|YP_006526133.1| putrescine ABC transporter substrate-binding protein [Pseudomonas
stutzeri DSM 10701]
gi|395810370|gb|AFN79775.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas stutzeri DSM 10701]
Length = 361
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 74/163 (45%), Gaps = 27/163 (16%)
Query: 228 DPRGKIWAAPYRWGTMAIGYK-KSKFQNHNLAPIEDWKDPWWPE----LAG-RISMVNSP 281
DP G AAPY WGT IGY +S + ++ W + PE LAG I+ ++S
Sbjct: 117 DP-GNTHAAPYLWGTNGIGYNVESVTAALGIEKVDSWAVIFEPENAKKLAGCGIAFLDSA 175
Query: 282 REVIVA--------------GGKIAVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGW 327
E+I A + L + VR F S+ Y+ G++ +A G+
Sbjct: 176 DEMIPAMLNYLGLDPNSENPDDYAKAEAKLLEVRPYVRYFHSSKYVSDLANGNICIAAGF 235
Query: 328 SSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
S DV A R ++A +PK G +LW D+ AIPA ++
Sbjct: 236 SGDVFQAAARADEAGKGIDIAYAIPKEGGNLWFDMLAIPADAQ 278
>gi|419305443|ref|ZP_13847353.1| putrescine-binding periplasmic protein [Escherichia coli DEC11D]
gi|378151922|gb|EHX13024.1| putrescine-binding periplasmic protein [Escherichia coli DEC11D]
Length = 325
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 73/165 (44%), Gaps = 29/165 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP K +A PY W T IGY K + AP++ W PE + +S +++
Sbjct: 79 DPDNK-FAMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDA 137
Query: 281 PREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAV 325
P EV A +L L L +R F S+ Y+ GD+ VA+
Sbjct: 138 PEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 197
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 198 GWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 242
>gi|378953501|ref|YP_005210989.1| protein SpuE/PotF2 [Pseudomonas fluorescens F113]
gi|359763515|gb|AEV65594.1| SpuE/PotF2 [Pseudomonas fluorescens F113]
Length = 365
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 73/159 (45%), Gaps = 27/159 (16%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN-HNLAPIEDWKDPWWPELAGR-----ISMVNSP 281
DP G ++A PY WGT IGY K + + I+ W + PE + +S ++S
Sbjct: 121 DP-GNLYAVPYLWGTNGIGYNVEKIKAVLGVDKIDSWAMLFEPENIKKLSSCGVSFLDSG 179
Query: 282 REVIVAGGKI--------------AVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGW 327
E+I A + L + V F+S+ Y+ G++ VA G+
Sbjct: 180 DEMIPAMLNYLGLNPNSEDPEDYKKAEAQLLKIRPYVTYFNSSKYISDLANGEICVAAGF 239
Query: 328 SSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIP 360
S D+ A +R S ++A V+PK G +LW D+ AIP
Sbjct: 240 SGDIFQARERASEAGKGVDIAYVIPKEGGNLWFDMLAIP 278
>gi|432552849|ref|ZP_19789579.1| putrescine-binding periplasmic protein [Escherichia coli KTE47]
gi|431086421|gb|ELD92444.1| putrescine-binding periplasmic protein [Escherichia coli KTE47]
Length = 325
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 73/165 (44%), Gaps = 29/165 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP K +A PY W T IGY K + AP++ W PE + +S +++
Sbjct: 79 DPDNK-FAMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDA 137
Query: 281 PREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAV 325
P EV A +L L L +R F S+ Y+ GD+ VA+
Sbjct: 138 PEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 197
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 198 GWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 242
>gi|419395467|ref|ZP_13936249.1| potF [Escherichia coli DEC15B]
gi|378250079|gb|EHY09987.1| potF [Escherichia coli DEC15B]
Length = 325
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 73/165 (44%), Gaps = 29/165 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP K +A PY W T IGY K + AP++ W PE + +S +++
Sbjct: 79 DPDNK-FAMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDA 137
Query: 281 PREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAV 325
P EV A +L L L +R F S+ Y+ GD+ VA+
Sbjct: 138 PEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 197
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 198 GWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 242
>gi|352106290|ref|ZP_08961341.1| extracellular solute-binding protein [Halomonas sp. HAL1]
gi|350597938|gb|EHA14063.1| extracellular solute-binding protein [Halomonas sp. HAL1]
Length = 367
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 75/160 (46%), Gaps = 29/160 (18%)
Query: 231 GKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGRIS-------MVNSP 281
G ++ PY WGT IGY + + + AP++ W + PE+ G +S M++S
Sbjct: 122 GSEYSVPYMWGTNGIGYNVERVKEILGDDAPLDSWALLFDPEITGALSEAGCGLSMLDSA 181
Query: 282 REVIVAG----GKIAVQQNL----------ALLANQVRLFDSTHYLKAFGIGDVWVAVGW 327
E++ G + +N+ A + + + F S+ Y+ GD+ VA G+
Sbjct: 182 DEMLSPAMAYLGLDPLSENIDDIEAAGELIASVRDDMTYFHSSRYVSDLANGDICVAAGY 241
Query: 328 SSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPA 361
S DV A R ++ +PK GA+LW D+ A+PA
Sbjct: 242 SGDVFQAAARAEEAGRDFSIGYSIPKEGAALWFDMMAVPA 281
>gi|424923080|ref|ZP_18346441.1| Spermidine/putrescine-binding periplasmic protein [Pseudomonas
fluorescens R124]
gi|404304240|gb|EJZ58202.1| Spermidine/putrescine-binding periplasmic protein [Pseudomonas
fluorescens R124]
Length = 362
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 68/153 (44%), Gaps = 26/153 (16%)
Query: 235 AAPYRWGTMAIGYKKSKF-QNHNLAPIEDWKDPWWPELAGR-----ISMVNSPREVIVA- 287
+ PY WGT IGY K Q + I+ W + PE + +SM++S EV A
Sbjct: 124 SVPYLWGTNGIGYNVDKVKQVLGIDHIDSWAVLFEPENIKKLSQCGVSMMDSADEVFPAI 183
Query: 288 ---GGKIAVQQN----------LALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPA 334
G +N L + + F S+ Y+ GD+ VA G+S DV A
Sbjct: 184 LNYMGMDPRSENPEDFKKAEAKLLSIRPYITYFHSSKYVSDLANGDICVAFGYSGDVFQA 243
Query: 335 VKRMS------NVAVVVPKSGASLWADLWAIPA 361
R N+A +PK GA+LW DL A+PA
Sbjct: 244 ANRAKEAKNGVNIAYAIPKEGANLWFDLLAVPA 276
>gi|301020628|ref|ZP_07184703.1| bacterial extracellular solute-binding protein [Escherichia coli MS
69-1]
gi|300398604|gb|EFJ82142.1| bacterial extracellular solute-binding protein [Escherichia coli MS
69-1]
Length = 395
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 74/166 (44%), Gaps = 31/166 (18%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQ---NHNLAPIEDWKDPWWPELAGR-----ISMVN 279
DP K +A PY W T IGY K + N AP++ W PE + +S ++
Sbjct: 149 DPDNK-FAMPYMWATTGIGYNVDKVKAVLGEN-APVDSWDLILKPENLEKLKSCGVSFLD 206
Query: 280 SPREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVA 324
+P EV A +L L L +R F S+ Y+ GD+ VA
Sbjct: 207 APEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVA 266
Query: 325 VGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
+GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 267 IGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 312
>gi|386034068|ref|YP_005953981.1| putrescine ABC transporter periplasmic-binding protein [Klebsiella
pneumoniae KCTC 2242]
gi|424829863|ref|ZP_18254591.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Klebsiella pneumoniae subsp. pneumoniae Ecl8]
gi|339761196|gb|AEJ97416.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae KCTC 2242]
gi|414707288|emb|CCN28992.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Klebsiella pneumoniae subsp. pneumoniae Ecl8]
Length = 370
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 73/165 (44%), Gaps = 29/165 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP K +A PY W T IGY K + AP++ W PE + +S +++
Sbjct: 124 DPENK-YAMPYLWATTGIGYNVDKVKAVLGKDAPVDSWDLVLKPENLEKLKSCGVSFLDA 182
Query: 281 PREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAV 325
P E+ A +L L L +R F S+ Y+ GD+ VA+
Sbjct: 183 PEEIFATVLNYLGKDPNSSKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 242
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 243 GWAGDVWQAANRAKEAKNGVNVSYFIPKEGALAFFDVFAMPADAK 287
>gi|307947450|ref|ZP_07662783.1| putrescine-binding periplasmic protein [Roseibium sp. TrichSKD4]
gi|307769268|gb|EFO28496.1| putrescine-binding periplasmic protein [Roseibium sp. TrichSKD4]
Length = 363
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 85/186 (45%), Gaps = 32/186 (17%)
Query: 204 DQDWFKRLSHKWK-VYLRSNDAGEIDPRGKIWAAPYRWGTMAIGY--KKSKFQNHNLAPI 260
D+ LS+ WK + R + DP G ++ Y WGT +GY +K K AP+
Sbjct: 96 DKSKLSNLSNMWKDIEARVE---KYDP-GNAYSINYMWGTTGLGYNVEKVKAALGEDAPV 151
Query: 261 EDWKDPWWPELAGR-----ISMVNSPREVIVAG-----------GKIAVQQNLALLAN-- 302
+ W + E + + ++++P E+I A K +++ LL
Sbjct: 152 DSWDLLFKEENISKLKDCGVHLLDAPTELIPAALNYLGMDPDSKDKGDIEKAGELLKTIR 211
Query: 303 -QVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWAD 355
V+ F S+ Y+ A GD+ VAVGWS DVL A R + V +PK GA +W D
Sbjct: 212 PYVQKFHSSEYINALANGDICVAVGWSGDVLQARDRAAEADNGVTVEYSIPKEGALMWFD 271
Query: 356 LWAIPA 361
A+PA
Sbjct: 272 QMAVPA 277
>gi|300924463|ref|ZP_07140433.1| bacterial extracellular solute-binding protein [Escherichia coli MS
182-1]
gi|301325862|ref|ZP_07219295.1| bacterial extracellular solute-binding protein [Escherichia coli MS
78-1]
gi|300419348|gb|EFK02659.1| bacterial extracellular solute-binding protein [Escherichia coli MS
182-1]
gi|300847376|gb|EFK75136.1| bacterial extracellular solute-binding protein [Escherichia coli MS
78-1]
Length = 395
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 74/166 (44%), Gaps = 31/166 (18%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQ---NHNLAPIEDWKDPWWPELAGR-----ISMVN 279
DP K +A PY W T IGY K + N AP++ W PE + +S ++
Sbjct: 149 DPDNK-FAMPYMWATTGIGYNVDKVKAVLGEN-APVDSWNLILKPENLEKLKSCGVSFLD 206
Query: 280 SPREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVA 324
+P EV A +L L L +R F S+ Y+ GD+ VA
Sbjct: 207 APEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVA 266
Query: 325 VGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
+GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 267 IGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 312
>gi|3891734|pdb|1A99|A Chain A, Putrescine Receptor (Potf) From E. Coli
gi|3891735|pdb|1A99|B Chain B, Putrescine Receptor (Potf) From E. Coli
gi|3891736|pdb|1A99|C Chain C, Putrescine Receptor (Potf) From E. Coli
gi|3891737|pdb|1A99|D Chain D, Putrescine Receptor (Potf) From E. Coli
Length = 344
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 73/165 (44%), Gaps = 29/165 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP K +A PY W T IGY K + AP++ W PE + +S +++
Sbjct: 98 DPDNK-FAMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDA 156
Query: 281 PREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAV 325
P EV A +L L L +R F S+ Y+ GD+ VA+
Sbjct: 157 PEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 216
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 217 GWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 261
>gi|347736466|ref|ZP_08869099.1| putrescine-binding periplasmic protein PotF [Azospirillum
amazonense Y2]
gi|346920037|gb|EGY01308.1| putrescine-binding periplasmic protein PotF [Azospirillum
amazonense Y2]
Length = 360
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 75/161 (46%), Gaps = 23/161 (14%)
Query: 225 GEIDPRGKIWAAPYRWGTMAIGYKKSKFQNH-NLAPIEDWKDPWWPELAGR-----ISMV 278
E+DP G +AA Y+WGT+ IGY K + A I+ WK + PE A + I ++
Sbjct: 117 AEVDP-GNEYAAIYQWGTVGIGYNPDKVKAALGTATIDSWKQVFDPENAKKLASCGIVVL 175
Query: 279 NSPREVI----------VAGGKIAVQQNLALLANQVRLFDSTH---YLKAFGIGDVWVAV 325
+SP +++ + K + L + +R + T + GD VA+
Sbjct: 176 DSPADILPSVLNYLGLPPSSEKSDDVKKAGELMSSIRPYIKTFVPSVIDPLASGDACVAI 235
Query: 326 GWSSDVLPAVKRMSN---VAVVVPKSGASLWADLWAIPAAS 363
G+S DVL A R + +PK GA LW D AIPA +
Sbjct: 236 GYSGDVLQAQARSGGKVKIDYAIPKEGAQLWFDTLAIPAGA 276
>gi|422782310|ref|ZP_16835095.1| extracellular solute-binding protein [Escherichia coli TW10509]
gi|323976761|gb|EGB71849.1| extracellular solute-binding protein [Escherichia coli TW10509]
Length = 395
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 74/166 (44%), Gaps = 31/166 (18%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQ---NHNLAPIEDWKDPWWPELAGR-----ISMVN 279
DP K +A PY W T IGY K + N AP++ W PE + +S ++
Sbjct: 149 DPDNK-FAMPYMWATTGIGYNVDKVKAVLGEN-APVDSWDLILKPENLEKLKSCGVSFLD 206
Query: 280 SPREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVA 324
+P EV A +L L L +R F S+ Y+ GD+ VA
Sbjct: 207 APEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVA 266
Query: 325 VGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
+GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 267 IGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 312
>gi|83941880|ref|ZP_00954342.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Sulfitobacter sp. EE-36]
gi|83847700|gb|EAP85575.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Sulfitobacter sp. EE-36]
Length = 361
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 82/185 (44%), Gaps = 30/185 (16%)
Query: 204 DQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIE 261
D+D +++ W V + + DP G +A Y WGT +G +K + AP++
Sbjct: 94 DKDKLPNITNMWDVI--EDRVSKYDP-GNEYAVNYMWGTTGLGVNMTKVKEVLGEDAPVD 150
Query: 262 DWKDPWWPELAGRIS-----MVNSPREVIVAGGKI--------------AVQQNLALLAN 302
+ PE +++ +++P E+I A K + L +A
Sbjct: 151 SLDLVFKPENMEKLAECGVHFLDAPTEMIPAALKFLGEDPQSQDPDVIAKAEPVLTAVAP 210
Query: 303 QVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADL 356
V+ F S+ Y+ A GD+ VA GWS D+L + R + +A PK GA +W D
Sbjct: 211 HVQKFHSSEYINALANGDICVAFGWSGDILQSRDRAAEADNGVEIAYYAPKEGALMWFDN 270
Query: 357 WAIPA 361
AIPA
Sbjct: 271 MAIPA 275
>gi|365139255|ref|ZP_09345724.1| putrescine-binding periplasmic protein [Klebsiella sp. 4_1_44FAA]
gi|363654420|gb|EHL93323.1| putrescine-binding periplasmic protein [Klebsiella sp. 4_1_44FAA]
Length = 370
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 73/165 (44%), Gaps = 29/165 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP K +A PY W T IGY K + AP++ W PE + +S +++
Sbjct: 124 DPENK-YAMPYLWATTGIGYNVDKVKAVLGKDAPVDSWDLVLKPENFEKLKSCGVSFLDA 182
Query: 281 PREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAV 325
P E+ A +L L L +R F S+ Y+ GD+ VA+
Sbjct: 183 PEEIFATVLNYLGKDPNSSKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 242
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 243 GWAGDVWQAANRAKEAKNGVNVSYFIPKEGALAFFDVFAMPADAK 287
>gi|300817047|ref|ZP_07097266.1| bacterial extracellular solute-binding protein [Escherichia coli MS
107-1]
gi|332282252|ref|ZP_08394665.1| putrescine-binding periplasmic protein [Shigella sp. D9]
gi|415880496|ref|ZP_11545169.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli MS 79-10]
gi|300530399|gb|EFK51461.1| bacterial extracellular solute-binding protein [Escherichia coli MS
107-1]
gi|332104604|gb|EGJ07950.1| putrescine-binding periplasmic protein [Shigella sp. D9]
gi|342926405|gb|EGU95127.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli MS 79-10]
Length = 395
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 74/166 (44%), Gaps = 31/166 (18%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQ---NHNLAPIEDWKDPWWPELAGR-----ISMVN 279
DP K +A PY W T IGY K + N AP++ W PE + +S ++
Sbjct: 149 DPDNK-FAMPYMWATTGIGYNVDKVKAVLGEN-APVDSWDLILKPENLEKLKSCGVSFLD 206
Query: 280 SPREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVA 324
+P EV A +L L L +R F S+ Y+ GD+ VA
Sbjct: 207 APEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVA 266
Query: 325 VGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
+GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 267 IGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 312
>gi|300901217|ref|ZP_07119319.1| bacterial extracellular solute-binding protein [Escherichia coli MS
198-1]
gi|300939899|ref|ZP_07154534.1| bacterial extracellular solute-binding protein [Escherichia coli MS
21-1]
gi|331672393|ref|ZP_08373184.1| putrescine-binding periplasmic protein [Escherichia coli TA280]
gi|300355342|gb|EFJ71212.1| bacterial extracellular solute-binding protein [Escherichia coli MS
198-1]
gi|300455281|gb|EFK18774.1| bacterial extracellular solute-binding protein [Escherichia coli MS
21-1]
gi|331070588|gb|EGI41952.1| putrescine-binding periplasmic protein [Escherichia coli TA280]
Length = 395
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 74/166 (44%), Gaps = 31/166 (18%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQ---NHNLAPIEDWKDPWWPELAGR-----ISMVN 279
DP K +A PY W T IGY K + N AP++ W PE + +S ++
Sbjct: 149 DPDNK-FAMPYMWATTGIGYNVDKVKAVLGEN-APVDSWDLILKPENLEKLKSCGVSFLD 206
Query: 280 SPREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVA 324
+P EV A +L L L +R F S+ Y+ GD+ VA
Sbjct: 207 APEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVA 266
Query: 325 VGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
+GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 267 IGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 312
>gi|152969442|ref|YP_001334551.1| putrescine ABC transporter periplasmic-binding protein [Klebsiella
pneumoniae subsp. pneumoniae MGH 78578]
gi|206577099|ref|YP_002239497.1| putrescine ABC transporter periplasmic-binding protein [Klebsiella
pneumoniae 342]
gi|288936345|ref|YP_003440404.1| family 1 extracellular solute-binding protein [Klebsiella variicola
At-22]
gi|290510599|ref|ZP_06549969.1| periplasmic-binding component [Klebsiella sp. 1_1_55]
gi|329999807|ref|ZP_08303535.1| putrescine-binding periplasmic protein [Klebsiella sp. MS 92-3]
gi|378977921|ref|YP_005226062.1| spermidine/putrescine transport system periplasmic
substrate-binding component [Klebsiella pneumoniae
subsp. pneumoniae HS11286]
gi|402781600|ref|YP_006637146.1| Putrescine ABC transporter putrescine-binding protein PotF
[Klebsiella pneumoniae subsp. pneumoniae 1084]
gi|419762541|ref|ZP_14288788.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
DSM 30104]
gi|419971965|ref|ZP_14487395.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH1]
gi|419978771|ref|ZP_14494066.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH2]
gi|419985544|ref|ZP_14500684.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH4]
gi|419992759|ref|ZP_14507711.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH5]
gi|419995076|ref|ZP_14509884.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH6]
gi|420003546|ref|ZP_14518191.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH7]
gi|420009197|ref|ZP_14523682.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH8]
gi|420016570|ref|ZP_14530860.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH9]
gi|420021885|ref|ZP_14536060.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH10]
gi|420025169|ref|ZP_14539179.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH11]
gi|420032279|ref|ZP_14546095.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH12]
gi|420039041|ref|ZP_14552681.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH14]
gi|420043699|ref|ZP_14557185.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH16]
gi|420050082|ref|ZP_14563385.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH17]
gi|420056222|ref|ZP_14569381.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH18]
gi|420061218|ref|ZP_14574209.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH19]
gi|420067945|ref|ZP_14580732.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH20]
gi|420072702|ref|ZP_14585337.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH21]
gi|420077640|ref|ZP_14590104.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH22]
gi|420083426|ref|ZP_14595708.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH23]
gi|421909288|ref|ZP_16339108.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Klebsiella pneumoniae subsp. pneumoniae
ST258-K26BO]
gi|421915899|ref|ZP_16345491.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Klebsiella pneumoniae subsp. pneumoniae
ST258-K28BO]
gi|424934273|ref|ZP_18352645.1| Putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KpQ3]
gi|425077462|ref|ZP_18480565.1| putrescine-binding periplasmic protein [Klebsiella pneumoniae
subsp. pneumoniae WGLW1]
gi|425088095|ref|ZP_18491188.1| putrescine-binding periplasmic protein [Klebsiella pneumoniae
subsp. pneumoniae WGLW3]
gi|425090758|ref|ZP_18493843.1| putrescine-binding periplasmic protein [Klebsiella pneumoniae
subsp. pneumoniae WGLW5]
gi|428150839|ref|ZP_18998595.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Klebsiella pneumoniae subsp. pneumoniae
ST512-K30BO]
gi|428941619|ref|ZP_19014657.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae VA360]
gi|449057000|ref|ZP_21735513.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae hvKP1]
gi|150954291|gb|ABR76321.1| periplasmic putrescine-binding protein; permease protein
[Klebsiella pneumoniae subsp. pneumoniae MGH 78578]
gi|206566157|gb|ACI07933.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Klebsiella pneumoniae 342]
gi|288891054|gb|ADC59372.1| extracellular solute-binding protein family 1 [Klebsiella variicola
At-22]
gi|289777315|gb|EFD85313.1| periplasmic-binding component [Klebsiella sp. 1_1_55]
gi|328538204|gb|EGF64354.1| putrescine-binding periplasmic protein [Klebsiella sp. MS 92-3]
gi|364517332|gb|AEW60460.1| spermidine/putrescine transport system periplasmic
substrate-binding component [Klebsiella pneumoniae
subsp. pneumoniae HS11286]
gi|397351214|gb|EJJ44299.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH2]
gi|397351358|gb|EJJ44442.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH4]
gi|397352903|gb|EJJ45981.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH1]
gi|397360172|gb|EJJ52854.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH5]
gi|397368849|gb|EJJ61454.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH6]
gi|397369366|gb|EJJ61967.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH7]
gi|397374739|gb|EJJ67059.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH9]
gi|397381977|gb|EJJ74142.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH8]
gi|397385957|gb|EJJ78044.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH10]
gi|397397726|gb|EJJ89398.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH11]
gi|397398046|gb|EJJ89712.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH12]
gi|397403619|gb|EJJ95176.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH14]
gi|397412009|gb|EJK03253.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH17]
gi|397413505|gb|EJK04718.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH16]
gi|397420859|gb|EJK11906.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH18]
gi|397427266|gb|EJK18047.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH20]
gi|397431278|gb|EJK21955.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH19]
gi|397438769|gb|EJK29249.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH21]
gi|397445829|gb|EJK36062.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH22]
gi|397451255|gb|EJK41343.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH23]
gi|397744722|gb|EJK91933.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
DSM 30104]
gi|402542476|gb|AFQ66625.1| Putrescine ABC transporter putrescine-binding protein PotF
[Klebsiella pneumoniae subsp. pneumoniae 1084]
gi|405593171|gb|EKB66623.1| putrescine-binding periplasmic protein [Klebsiella pneumoniae
subsp. pneumoniae WGLW1]
gi|405602227|gb|EKB75369.1| putrescine-binding periplasmic protein [Klebsiella pneumoniae
subsp. pneumoniae WGLW3]
gi|405613736|gb|EKB86465.1| putrescine-binding periplasmic protein [Klebsiella pneumoniae
subsp. pneumoniae WGLW5]
gi|407808460|gb|EKF79711.1| Putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KpQ3]
gi|410116845|emb|CCM81733.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Klebsiella pneumoniae subsp. pneumoniae
ST258-K26BO]
gi|410121811|emb|CCM88116.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Klebsiella pneumoniae subsp. pneumoniae
ST258-K28BO]
gi|426300139|gb|EKV62438.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae VA360]
gi|427539108|emb|CCM94733.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Klebsiella pneumoniae subsp. pneumoniae
ST512-K30BO]
gi|448875441|gb|EMB10458.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae hvKP1]
Length = 370
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 73/165 (44%), Gaps = 29/165 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP K +A PY W T IGY K + AP++ W PE + +S +++
Sbjct: 124 DPENK-YAMPYLWATTGIGYNVDKVKAVLGKDAPVDSWDLVLKPENLEKLKSCGVSFLDA 182
Query: 281 PREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAV 325
P E+ A +L L L +R F S+ Y+ GD+ VA+
Sbjct: 183 PEEIFATVLNYLGKDPNSSKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 242
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 243 GWAGDVWQAANRAKEAKNGVNVSYFIPKEGALAFFDVFAMPADAK 287
>gi|331651869|ref|ZP_08352888.1| putrescine-binding periplasmic protein [Escherichia coli M718]
gi|331050147|gb|EGI22205.1| putrescine-binding periplasmic protein [Escherichia coli M718]
Length = 395
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 74/166 (44%), Gaps = 31/166 (18%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQ---NHNLAPIEDWKDPWWPELAGR-----ISMVN 279
DP K +A PY W T IGY K + N AP++ W PE + +S ++
Sbjct: 149 DPDNK-FAMPYMWATTGIGYNVDKVKAVLGEN-APVDSWDLILKPENLEKLKSCGVSFLD 206
Query: 280 SPREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVA 324
+P EV A +L L L +R F S+ Y+ GD+ VA
Sbjct: 207 APEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVA 266
Query: 325 VGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
+GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 267 IGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 312
>gi|242278796|ref|YP_002990925.1| extracellular solute-binding protein [Desulfovibrio salexigens DSM
2638]
gi|242121690|gb|ACS79386.1| extracellular solute-binding protein family 1 [Desulfovibrio
salexigens DSM 2638]
Length = 342
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 65/152 (42%), Gaps = 18/152 (11%)
Query: 227 IDPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVIV 286
DP ++ PY WG+ +I + N + I D W PEL G++ + N PREV
Sbjct: 114 FDPENT-YSIPYMWGSTSIAVNTALLGNDTVNSIADL---WKPELKGKLLLPNEPREVFA 169
Query: 287 AGGKI--------------AVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVL 332
K+ Q L L VR+FDS +A G++ V V ++ +
Sbjct: 170 LALKLLGYPLNETDPAHIEEAYQKLKTLIPSVRVFDSDSPKQALLAGEIAVGVVFNGEAF 229
Query: 333 PAVKRMSNVAVVVPKSGASLWADLWAIPAASR 364
A + ++ V P G +LW D IP ++
Sbjct: 230 IANQENPDIKYVYPPEGYNLWVDSLCIPKGAK 261
>gi|425080696|ref|ZP_18483793.1| putrescine-binding periplasmic protein [Klebsiella pneumoniae
subsp. pneumoniae WGLW2]
gi|428936123|ref|ZP_19009554.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae JHCK1]
gi|405605831|gb|EKB78835.1| putrescine-binding periplasmic protein [Klebsiella pneumoniae
subsp. pneumoniae WGLW2]
gi|426298988|gb|EKV61354.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae JHCK1]
Length = 370
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 73/165 (44%), Gaps = 29/165 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP K +A PY W T IGY K + AP++ W PE + +S +++
Sbjct: 124 DPENK-YAMPYLWATTGIGYNVDKVKAVLGKDAPVDSWDLVLKPENLEKLKSCGVSFLDA 182
Query: 281 PREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAV 325
P E+ A +L L L +R F S+ Y+ GD+ VA+
Sbjct: 183 PEEIFATVLNYLGKDPNSSKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 242
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 243 GWAGDVWQAANRAKEAKNGVNVSYFIPKEGALAFFDVFAMPADAK 287
>gi|389684610|ref|ZP_10175938.1| periplasmic putrescine-binding protein [Pseudomonas chlororaphis
O6]
gi|388551833|gb|EIM15098.1| periplasmic putrescine-binding protein [Pseudomonas chlororaphis
O6]
Length = 362
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 70/160 (43%), Gaps = 27/160 (16%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKF-QNHNLAPIEDWKDPWWPELAGR-----ISMVNSP 281
DP G ++ PY WGT IGY K Q + I+ W + PE + +SM++SP
Sbjct: 118 DP-GNQYSVPYLWGTNGIGYNVDKVKQVLGVDKIDSWAVFFEPENLKKLSQCGVSMMDSP 176
Query: 282 REVIVA--------------GGKIAVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGW 327
EV A + L + + F S+ Y+ G++ +A G+
Sbjct: 177 DEVFPAMLNYLGLDPRSENPADYKKAEAKLLAIRPYITYFHSSKYVSDLANGNICLAFGY 236
Query: 328 SSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIPA 361
S DV A R +A +PK G++LW DL AIPA
Sbjct: 237 SGDVFQAANRAKEAKNGVKIAYSIPKEGSNLWFDLLAIPA 276
>gi|188496410|ref|ZP_03003680.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli 53638]
gi|188491609|gb|EDU66712.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli 53638]
Length = 420
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 74/166 (44%), Gaps = 31/166 (18%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQ---NHNLAPIEDWKDPWWPELAGR-----ISMVN 279
DP K +A PY W T IGY K + N AP++ W PE + +S ++
Sbjct: 174 DPDNK-FAMPYMWATTGIGYNVDKVKAVLGEN-APVDSWDLILKPENLEKLKSCGVSFLD 231
Query: 280 SPREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVA 324
+P EV A +L L L +R F S+ Y+ GD+ VA
Sbjct: 232 APEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVA 291
Query: 325 VGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
+GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 292 IGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 337
>gi|309795351|ref|ZP_07689769.1| bacterial extracellular solute-binding protein [Escherichia coli MS
145-7]
gi|308121001|gb|EFO58263.1| bacterial extracellular solute-binding protein [Escherichia coli MS
145-7]
Length = 395
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 74/166 (44%), Gaps = 31/166 (18%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQ---NHNLAPIEDWKDPWWPELAGR-----ISMVN 279
DP K +A PY W T IGY K + N AP++ W PE + +S ++
Sbjct: 149 DPDNK-FAMPYMWATTGIGYNVDKVKAVLGEN-APVDSWDLILKPENLEKLKSCGVSFLD 206
Query: 280 SPREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVA 324
+P EV A +L L L +R F S+ Y+ GD+ VA
Sbjct: 207 APEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVA 266
Query: 325 VGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
+GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 267 IGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 312
>gi|291281853|ref|YP_003498671.1| putrescine ABC transporter substrate-binding protein [Escherichia
coli O55:H7 str. CB9615]
gi|290761726|gb|ADD55687.1| Putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli O55:H7 str. CB9615]
Length = 420
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 74/166 (44%), Gaps = 31/166 (18%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQ---NHNLAPIEDWKDPWWPELAGR-----ISMVN 279
DP K +A PY W T IGY K + N AP++ W PE + +S ++
Sbjct: 174 DPDNK-FAMPYMWATTGIGYNVDKVKAVLGEN-APVDSWDLILKPENLEKLKSCGVSFLD 231
Query: 280 SPREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVA 324
+P EV A +L L L +R F S+ Y+ GD+ VA
Sbjct: 232 APEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVA 291
Query: 325 VGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
+GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 292 IGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 337
>gi|126729921|ref|ZP_01745733.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Sagittula stellata E-37]
gi|126709301|gb|EBA08355.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Sagittula stellata E-37]
Length = 365
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 76/160 (47%), Gaps = 28/160 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGRIS-----MVNS 280
DP G +A Y WGT IG K + AP++ W + PE +++ +++
Sbjct: 120 DP-GNEYAINYMWGTTGIGVNVPKVKELLGEDAPLDSWDLVFKPENMEKLAECGVHFLDA 178
Query: 281 PREVIVAG----GKIAVQQNLALLANQ----------VRLFDSTHYLKAFGIGDVWVAVG 326
P E++ A G+ + ++A ++ F S+ Y+ A G++ VAVG
Sbjct: 179 PAEMLPAALNYIGEDPDSHDPDVIAKAGDVYAPIRPYIQKFHSSEYINALANGEICVAVG 238
Query: 327 WSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIP 360
WS DVL A R + VA ++PK GA +W D+ A+P
Sbjct: 239 WSGDVLQARDRAAEADNGVEVAYIIPKEGAQMWFDMMAVP 278
>gi|420330059|ref|ZP_14831756.1| putrescine-binding periplasmic domain protein [Shigella flexneri
K-1770]
gi|391258105|gb|EIQ17211.1| putrescine-binding periplasmic domain protein [Shigella flexneri
K-1770]
Length = 289
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 73/165 (44%), Gaps = 29/165 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP K +A PY W T IGY K + AP++ W PE + +S +++
Sbjct: 43 DPDNK-FAMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDA 101
Query: 281 PREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAV 325
P EV A +L L L +R F S+ Y+ GD+ VA+
Sbjct: 102 PEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 161
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 162 GWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 206
>gi|386704035|ref|YP_006167882.1| putrescine ABC transporter periplasmic-binding protein, partial
[Escherichia coli P12b]
gi|383102203|gb|AFG39712.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli P12b]
Length = 298
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 73/165 (44%), Gaps = 29/165 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP K +A PY W T IGY K + AP++ W PE + +S +++
Sbjct: 52 DPDNK-FAMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDA 110
Query: 281 PREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAV 325
P EV A +L L L +R F S+ Y+ GD+ VA+
Sbjct: 111 PEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 170
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 171 GWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 215
>gi|330501041|ref|YP_004377910.1| extracellular solute-binding protein [Pseudomonas mendocina NK-01]
gi|328915327|gb|AEB56158.1| extracellular solute-binding protein [Pseudomonas mendocina NK-01]
Length = 364
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 106/262 (40%), Gaps = 42/262 (16%)
Query: 138 LRVVSLQNSVPQSWVKDFMRSQGKRLK---FQMNLCASIDGIVNN----LSTPFNK-LSF 189
LRV + + + S KDF + G ++ F+ N + N L P N+ L
Sbjct: 27 LRVYNWADYILPSVPKDFQKESGIQITWDTFETNEALEAKLLTGNSGYDLVIPSNQFLET 86
Query: 190 AIKKRFIEPIAEAEDQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIGYKK 249
IK + +++ +W K L L ND G + PY +GT+ IGY
Sbjct: 87 QIKAGVFAKLDKSKIPNW-KNLDPALLKLLEKNDPGNQ------YGVPYMYGTVLIGYNP 139
Query: 250 SKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNSPREVI-VAGGKIAVQQN----- 296
K + + AP+ W + PE + ++M++SP E+I +A + + N
Sbjct: 140 DKVKAALGDDAPVNSWDLVFKPEYMEKLKSCGVAMLDSPTEIIPIALHYLGLDPNSTNPA 199
Query: 297 --------LALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVV--- 345
L + V F S Y+ GD+ VAVG+S R V
Sbjct: 200 DYDKVTELLLKVRPYVTYFHSAKYMTDIANGDICVAVGYSGSFYQFANRAKEAGNGVTIN 259
Query: 346 ---PKSGASLWADLWAIPAASR 364
PK GA +W D WAIP +++
Sbjct: 260 WRLPKEGAPIWFDTWAIPKSAQ 281
>gi|422765428|ref|ZP_16819155.1| bacterial extracellular solute-binding protein [Escherichia coli
E1520]
gi|323937961|gb|EGB34223.1| bacterial extracellular solute-binding protein [Escherichia coli
E1520]
Length = 395
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 74/166 (44%), Gaps = 31/166 (18%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQ---NHNLAPIEDWKDPWWPELAGR-----ISMVN 279
DP K +A PY W T IGY K + N AP++ W PE + +S ++
Sbjct: 149 DPDNK-FAMPYMWATTGIGYNVDKVKAVLGEN-APVDSWDLILKPENLEKLKSCGVSFLD 206
Query: 280 SPREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVA 324
+P EV A +L L L +R F S+ Y+ GD+ VA
Sbjct: 207 APEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVA 266
Query: 325 VGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
+GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 267 IGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 312
>gi|300823995|ref|ZP_07104117.1| bacterial extracellular solute-binding protein [Escherichia coli MS
119-7]
gi|300921116|ref|ZP_07137500.1| bacterial extracellular solute-binding protein [Escherichia coli MS
115-1]
gi|301646291|ref|ZP_07246182.1| bacterial extracellular solute-binding protein [Escherichia coli MS
146-1]
gi|331641375|ref|ZP_08342510.1| putrescine-binding periplasmic protein [Escherichia coli H736]
gi|331676642|ref|ZP_08377338.1| putrescine-binding periplasmic protein [Escherichia coli H591]
gi|422793872|ref|ZP_16846565.1| extracellular solute-binding protein [Escherichia coli TA007]
gi|300411967|gb|EFJ95277.1| bacterial extracellular solute-binding protein [Escherichia coli MS
115-1]
gi|300523506|gb|EFK44575.1| bacterial extracellular solute-binding protein [Escherichia coli MS
119-7]
gi|301075494|gb|EFK90300.1| bacterial extracellular solute-binding protein [Escherichia coli MS
146-1]
gi|323969582|gb|EGB64870.1| extracellular solute-binding protein [Escherichia coli TA007]
gi|331038173|gb|EGI10393.1| putrescine-binding periplasmic protein [Escherichia coli H736]
gi|331075331|gb|EGI46629.1| putrescine-binding periplasmic protein [Escherichia coli H591]
Length = 395
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 74/166 (44%), Gaps = 31/166 (18%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQ---NHNLAPIEDWKDPWWPELAGR-----ISMVN 279
DP K +A PY W T IGY K + N AP++ W PE + +S ++
Sbjct: 149 DPDNK-FAMPYMWATTGIGYNVDKVKAVLGEN-APVDSWDLILKPENLEKLKSCGVSFLD 206
Query: 280 SPREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVA 324
+P EV A +L L L +R F S+ Y+ GD+ VA
Sbjct: 207 APEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVA 266
Query: 325 VGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
+GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 267 IGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 312
>gi|257454396|ref|ZP_05619658.1| spermidine/putrescine-binding periplasmic protein [Enhydrobacter
aerosaccus SK60]
gi|257448162|gb|EEV23143.1| spermidine/putrescine-binding periplasmic protein [Enhydrobacter
aerosaccus SK60]
Length = 380
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 90/210 (42%), Gaps = 34/210 (16%)
Query: 227 IDPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVIV 286
DP K ++ PY WG+ I + A + W D W PE GR+ ++N R+V
Sbjct: 149 FDPENK-FSIPYLWGSSGIAVNTKRIAK---ASLSSWNDLWKPEYEGRVMLMNDIRDVFT 204
Query: 287 A-------GGKI----AVQQ---NLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVL 332
G A++Q L L VR F+S F G+ ++ + W+ +V+
Sbjct: 205 MSLLTLGYNGSTKNPEAIKQAYEKLTKLMPNVRTFNSDAPRMPFMEGETYLGLAWNGEVI 264
Query: 333 PAVKR-MSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGQVRGPSPLIHQWIEFCLQT 391
A + M + V PK GA +W D IP ++ H++I+F L+
Sbjct: 265 MAQDQGMPELDFVYPKEGAIMWMDNMVIPKNAKNNDNA------------HKFIDFILRP 312
Query: 392 ARALPFKQEVIPGASPSALESTLVKLPEEL 421
A +E+ G SP+ E+ ++P EL
Sbjct: 313 KYAAMISEEIGYG-SPN--EAAKKEMPPEL 339
>gi|398853858|ref|ZP_10610447.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM80]
gi|398238126|gb|EJN23862.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM80]
Length = 365
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 73/167 (43%), Gaps = 37/167 (22%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN-HNLAPIEDWKDPWWPELAGR-----ISMVNSP 281
DP G ++A PY WGT IGY K + + I+ W + PE + ++ ++S
Sbjct: 121 DP-GNLYAVPYLWGTNGIGYNVDKVKAVLGVDKIDSWGVLFEPENIKKLQSCGVAFLDSA 179
Query: 282 REVIVAGGKIAVQQNLALLANQ-------------------VRLFDSTHYLKAFGIGDVW 322
E++ V + L AN V F S+ Y+ GD+
Sbjct: 180 DEMMPT-----VLNYMGLNANSTNPKDYEKATAKLLAVRPYVTYFHSSKYIGDLANGDIC 234
Query: 323 VAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAAS 363
VA+G+S D+ A R + N+A VPK G +LW D+ AIP S
Sbjct: 235 VAIGFSGDIFQAKNRAAEAKKGVNIAYTVPKEGGALWFDMLAIPKDS 281
>gi|420390323|ref|ZP_14889591.1| potF [Escherichia coli EPEC C342-62]
gi|391314647|gb|EIQ72197.1| potF [Escherichia coli EPEC C342-62]
Length = 353
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 73/165 (44%), Gaps = 29/165 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP K +A PY W T IGY K + AP++ W PE + +S +++
Sbjct: 107 DPDNK-FAMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDA 165
Query: 281 PREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAV 325
P EV A +L L L +R F S+ Y+ GD+ VA+
Sbjct: 166 PEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 225
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 226 GWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 270
>gi|302037133|ref|YP_003797455.1| polyamine ABC transporter periplasmic-binding protein PotD
[Candidatus Nitrospira defluvii]
gi|300605197|emb|CBK41530.1| Polyamine ABC transporter, periplasmic-binding protein PotD
[Candidatus Nitrospira defluvii]
Length = 349
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 66/147 (44%), Gaps = 19/147 (12%)
Query: 227 IDPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVIV 286
DP + ++ PY WG++ IGY + P + W W GRISM+N REV
Sbjct: 122 FDPERR-YSIPYLWGSVGIGYDAAVIPT----PPDSWAILWDERYKGRISMLNDQREVFG 176
Query: 287 A-----GGKI---------AVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVL 332
A G + A ++ L V+ + S HY + G+V +A W V
Sbjct: 177 AVLRSMGQSMNSTDPQVIEAAKERLLRQKPLVKTYTSDHYDQLLASGEVVLAHAWGGPVA 236
Query: 333 PAVKRMSNVAVVVPKSGASLWADLWAI 359
A+ ++ VVPK GA+LWAD +
Sbjct: 237 RAMVERPSIRYVVPKEGATLWADCLVV 263
>gi|300902387|ref|ZP_07120370.1| bacterial extracellular solute-binding protein [Escherichia coli MS
84-1]
gi|301305374|ref|ZP_07211469.1| bacterial extracellular solute-binding protein [Escherichia coli MS
124-1]
gi|415860860|ref|ZP_11534575.1| bacterial extracellular solute-binding protein [Escherichia coli MS
85-1]
gi|300405534|gb|EFJ89072.1| bacterial extracellular solute-binding protein [Escherichia coli MS
84-1]
gi|300839392|gb|EFK67152.1| bacterial extracellular solute-binding protein [Escherichia coli MS
124-1]
gi|315257890|gb|EFU37858.1| bacterial extracellular solute-binding protein [Escherichia coli MS
85-1]
Length = 395
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 74/166 (44%), Gaps = 31/166 (18%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQ---NHNLAPIEDWKDPWWPELAGR-----ISMVN 279
DP K +A PY W T IGY K + N AP++ W PE + +S ++
Sbjct: 149 DPDNK-FAMPYMWATTGIGYNVDKVKAVLGEN-APVDSWDLILKPENLEKLKSCGVSFLD 206
Query: 280 SPREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVA 324
+P EV A +L L L +R F S+ Y+ GD+ VA
Sbjct: 207 APEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVA 266
Query: 325 VGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
+GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 267 IGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 312
>gi|83855357|ref|ZP_00948887.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Sulfitobacter sp. NAS-14.1]
gi|83843200|gb|EAP82367.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Sulfitobacter sp. NAS-14.1]
Length = 361
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 82/185 (44%), Gaps = 30/185 (16%)
Query: 204 DQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIE 261
D+D +++ W V + + DP G +A Y WGT +G +K + AP++
Sbjct: 94 DKDKLPNITNMWDVI--EDRVSKYDP-GNEYAVNYMWGTTGLGVNMTKVKEVLGEDAPVD 150
Query: 262 DWKDPWWPELAGRIS-----MVNSPREVIVAGGKI--------------AVQQNLALLAN 302
+ PE +++ +++P E+I A K + L +A
Sbjct: 151 SLDLVFKPENMEKLAECGVHFLDAPTEMIPAALKFLGEDPQTQDPDVIAKAEPVLTAVAP 210
Query: 303 QVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADL 356
V+ F S+ Y+ A GD+ VA GWS D+L + R + +A PK GA +W D
Sbjct: 211 HVQKFHSSEYINALANGDICVAFGWSGDILQSRDRAAEADNGVEIAYYAPKEGALMWFDN 270
Query: 357 WAIPA 361
AIPA
Sbjct: 271 MAIPA 275
>gi|384542392|ref|YP_005726454.1| Putrescine-binding periplasmic protein [Shigella flexneri 2002017]
gi|281600177|gb|ADA73161.1| Putrescine-binding periplasmic protein [Shigella flexneri 2002017]
Length = 395
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 74/166 (44%), Gaps = 31/166 (18%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQ---NHNLAPIEDWKDPWWPELAGR-----ISMVN 279
DP K +A PY W T IGY K + N AP++ W PE + +S ++
Sbjct: 149 DPDNK-FAMPYMWATTGIGYNVDKVKAVLGEN-APVDSWDLILKPENLEKLKSCGVSFLD 206
Query: 280 SPREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVA 324
+P EV A +L L L +R F S+ Y+ GD+ VA
Sbjct: 207 APEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVA 266
Query: 325 VGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
+GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 267 IGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 312
>gi|300929337|ref|ZP_07144810.1| bacterial extracellular solute-binding protein [Escherichia coli MS
187-1]
gi|422785446|ref|ZP_16838185.1| extracellular solute-binding protein [Escherichia coli H489]
gi|300462683|gb|EFK26176.1| bacterial extracellular solute-binding protein [Escherichia coli MS
187-1]
gi|323962967|gb|EGB58539.1| extracellular solute-binding protein [Escherichia coli H489]
Length = 395
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 74/166 (44%), Gaps = 31/166 (18%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQ---NHNLAPIEDWKDPWWPELAGR-----ISMVN 279
DP K +A PY W T IGY K + N AP++ W PE + +S ++
Sbjct: 149 DPDNK-FAMPYMWATTGIGYNVDKVKAVLGEN-APVDSWDLILKPENLEKLKSCGVSFLD 206
Query: 280 SPREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVA 324
+P EV A +L L L +R F S+ Y+ GD+ VA
Sbjct: 207 APEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVA 266
Query: 325 VGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
+GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 267 IGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 312
>gi|300947056|ref|ZP_07161277.1| bacterial extracellular solute-binding protein [Escherichia coli MS
116-1]
gi|300957057|ref|ZP_07169303.1| bacterial extracellular solute-binding protein [Escherichia coli MS
175-1]
gi|422770088|ref|ZP_16823779.1| extracellular solute-binding protein [Escherichia coli E482]
gi|300316197|gb|EFJ65981.1| bacterial extracellular solute-binding protein [Escherichia coli MS
175-1]
gi|300453295|gb|EFK16915.1| bacterial extracellular solute-binding protein [Escherichia coli MS
116-1]
gi|323942771|gb|EGB38936.1| extracellular solute-binding protein [Escherichia coli E482]
Length = 415
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 74/166 (44%), Gaps = 31/166 (18%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQ---NHNLAPIEDWKDPWWPELAGR-----ISMVN 279
DP K +A PY W T IGY K + N AP++ W PE + +S ++
Sbjct: 169 DPDNK-FAMPYMWATTGIGYNVDKVKAVLGEN-APVDSWDLILKPENLEKLKSCGVSFLD 226
Query: 280 SPREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVA 324
+P EV A +L L L +R F S+ Y+ GD+ VA
Sbjct: 227 APEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVA 286
Query: 325 VGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
+GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 287 IGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 332
>gi|110804852|ref|YP_688372.1| spermidine/putrescine ABC transporter substrate-binding protein
[Shigella flexneri 5 str. 8401]
gi|424837314|ref|ZP_18261951.1| putrescine ABC transporter periplasmic-binding protein [Shigella
flexneri 5a str. M90T]
gi|110614400|gb|ABF03067.1| Putrescine-binding periplasmic protein precursor [Shigella flexneri
5 str. 8401]
gi|383466366|gb|EID61387.1| putrescine ABC transporter periplasmic-binding protein [Shigella
flexneri 5a str. M90T]
Length = 395
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 74/166 (44%), Gaps = 31/166 (18%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQ---NHNLAPIEDWKDPWWPELAGR-----ISMVN 279
DP K +A PY W T IGY K + N AP++ W PE + +S ++
Sbjct: 149 DPDNK-FAMPYMWATTGIGYNVDKVKAVLGEN-APVDSWDLILKPENLEKLKSCGVSFLD 206
Query: 280 SPREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVA 324
+P EV A +L L L +R F S+ Y+ GD+ VA
Sbjct: 207 APEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVA 266
Query: 325 VGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
+GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 267 IGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 312
>gi|419146898|ref|ZP_13691589.1| potF [Escherichia coli DEC6B]
gi|378000417|gb|EHV63488.1| potF [Escherichia coli DEC6B]
Length = 353
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 73/165 (44%), Gaps = 29/165 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP K +A PY W T IGY K + AP++ W PE + +S +++
Sbjct: 107 DPDNK-FAMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDA 165
Query: 281 PREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAV 325
P EV A +L L L +R F S+ Y+ GD+ VA+
Sbjct: 166 PEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 225
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 226 GWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 270
>gi|417737718|ref|ZP_12386319.1| putrescine-binding periplasmic protein [Shigella flexneri 4343-70]
gi|332759765|gb|EGJ90068.1| putrescine-binding periplasmic protein [Shigella flexneri 4343-70]
Length = 353
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 73/165 (44%), Gaps = 29/165 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP K +A PY W T IGY K + AP++ W PE + +S +++
Sbjct: 107 DPDNK-FAMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDA 165
Query: 281 PREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAV 325
P EV A +L L L +R F S+ Y+ GD+ VA+
Sbjct: 166 PEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 225
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 226 GWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 270
>gi|417742354|ref|ZP_12390904.1| potF [Shigella flexneri 2930-71]
gi|417826927|ref|ZP_12473500.1| potF [Shigella flexneri J1713]
gi|332768025|gb|EGJ98211.1| potF [Shigella flexneri 2930-71]
gi|335576695|gb|EGM62940.1| potF [Shigella flexneri J1713]
Length = 353
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 73/165 (44%), Gaps = 29/165 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP K +A PY W T IGY K + AP++ W PE + +S +++
Sbjct: 107 DPDNK-FAMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDA 165
Query: 281 PREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAV 325
P EV A +L L L +R F S+ Y+ GD+ VA+
Sbjct: 166 PEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 225
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 226 GWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 270
>gi|418945897|ref|ZP_13498573.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily, partial [Escherichia coli O157:H43 str.
T22]
gi|375318787|gb|EHS65157.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily, partial [Escherichia coli O157:H43 str.
T22]
Length = 288
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 73/165 (44%), Gaps = 29/165 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP K +A PY W T IGY K + AP++ W PE + +S +++
Sbjct: 42 DPDNK-FAMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDA 100
Query: 281 PREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAV 325
P EV A +L L L +R F S+ Y+ GD+ VA+
Sbjct: 101 PEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 160
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 161 GWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 205
>gi|417455361|ref|ZP_12163500.1| Putrescine ABC transporter putrescine-binding protein PotF, partial
[Salmonella enterica subsp. enterica serovar Montevideo
str. S5-403]
gi|353634815|gb|EHC81292.1| Putrescine ABC transporter putrescine-binding protein PotF, partial
[Salmonella enterica subsp. enterica serovar Montevideo
str. S5-403]
Length = 349
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 72/165 (43%), Gaps = 29/165 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP K +A PY W T IGY K + + AP+ W PE + +S +++
Sbjct: 134 DPDNK-YAMPYMWATTGIGYNVDKVKAVLGDDAPVNSWDLVLKPENLEKLKSCGVSFLDA 192
Query: 281 PREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAV 325
P E+ A +L L L +R F S+ Y+ GD VA+
Sbjct: 193 PEEIFATVLNYLGKDPNSSKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDTCVAI 252
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
GW+ DV A R N++ +PK GA + D++A+PA ++
Sbjct: 253 GWAGDVWQAANRAKEAKNGVNISFSIPKEGAMAFFDVFAMPADAK 297
>gi|398840193|ref|ZP_10597431.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM102]
gi|398111211|gb|EJM01101.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM102]
Length = 362
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 75/179 (41%), Gaps = 32/179 (17%)
Query: 209 KRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIGYKKSKF-QNHNLAPIEDWKDPW 267
K L K L ND G + PY WGT IGY K Q + I+ W +
Sbjct: 104 KNLDPKLLALLEKNDPGNEH------SVPYLWGTNGIGYNVDKVKQVLGIDRIDSWAVFF 157
Query: 268 WPELAGR-----ISMVNSPREVIVA----GGKIAVQQN----------LALLANQVRLFD 308
P+ + +SM++S EV A G +N L + + F
Sbjct: 158 EPQNLKKLSQCGVSMMDSADEVFPAVLNYMGMDPRSENPEDFKKAEAKLMTIRPYITYFH 217
Query: 309 STHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPA 361
S+ Y+ GD+ VA G+S DV A R N+A +PK G++LW DL AIPA
Sbjct: 218 SSKYVSDLANGDICVAFGYSGDVFQAANRAKEAKNGVNIAYSIPKEGSNLWFDLLAIPA 276
>gi|118443532|ref|YP_877312.1| extracellular solute-binding protein [Clostridium novyi NT]
gi|118133988|gb|ABK61032.1| Bacterial extracellular solute-binding protein, putative
[Clostridium novyi NT]
Length = 347
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 72/153 (47%), Gaps = 21/153 (13%)
Query: 227 IDPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVI- 285
DP+ + ++ PY WGT+ I Y +++ I+ W W P+ G+I MV+S R+ I
Sbjct: 120 FDPKNQ-YSVPYMWGTVGIIYNTKLIKDN----IDSWDALWNPKYKGQILMVDSQRDAIA 174
Query: 286 VAGGKIAVQQNLA----LLANQVRLFDSTHYLKAFGIGDVW----------VAVGWSSDV 331
VA K+ N L + L + A+ +GD +AV WS D
Sbjct: 175 VALKKLGYSMNTTNKAELEKAKQELIKQKPLVHAY-VGDEVKDLMTDEEGAIAVVWSGDA 233
Query: 332 LPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 364
+ +K N+ V+PK G++LW D IP S+
Sbjct: 234 VTMMKNNKNLRYVIPKEGSNLWFDNMVIPKGSK 266
>gi|291616867|ref|YP_003519609.1| PotF [Pantoea ananatis LMG 20103]
gi|291151897|gb|ADD76481.1| PotF [Pantoea ananatis LMG 20103]
Length = 369
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 72/165 (43%), Gaps = 29/165 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGY--KKSKFQNHNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP G +A PY WGT IGY +K K AP+ W PE + +S +++
Sbjct: 123 DP-GNKYAIPYLWGTTGIGYNVEKVKATLGADAPVNSWDLVLKPENLEKLKSCGVSFLDA 181
Query: 281 PREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAV 325
P E+ A +L L L +R F S+ Y+ G++ VA+
Sbjct: 182 PEEIFATVLNYLGKDPNSSDAKDYSGAATDLLLKLRPNIRYFHSSQYINDLANGNICVAI 241
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
GWS D+L A R N+ VPK GA + D+ AIP ++
Sbjct: 242 GWSGDILQAKNRAEKAKNGVNIGYSVPKEGALAFFDMMAIPKDAK 286
>gi|90419921|ref|ZP_01227830.1| putative periplasmic substrate-binding protein, ABC-type
spermidine/putrescine transporter [Aurantimonas
manganoxydans SI85-9A1]
gi|90335962|gb|EAS49710.1| putative periplasmic substrate-binding protein, ABC-type
spermidine/putrescine transporter [Aurantimonas
manganoxydans SI85-9A1]
Length = 366
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 69/154 (44%), Gaps = 26/154 (16%)
Query: 234 WAAPYRWGTMAIGYKKSKFQNH-NLAPIEDWKDPWWPELAGR-----ISMVNSPREVIVA 287
++ Y WGT IGY K + + P + W + P+ A + I M+++P EV+ A
Sbjct: 127 YSVNYMWGTTGIGYNKKMVEERIDNPPTDSWDLIFDPQYAEKLADCGIMMLDAPTEVMPA 186
Query: 288 G-----------GKIAVQQNLALLANQ---VRLFDSTHYLKAFGIGDVWVAVGWSSDVLP 333
++Q +L VR F S+ Y+ A GD+ V G+S D+
Sbjct: 187 ALNHLGLDPNSTDPAEIEQAKEMLLKVRPFVRKFHSSEYINALANGDICVGYGYSGDIFQ 246
Query: 334 AVKRMS------NVAVVVPKSGASLWADLWAIPA 361
A R + +A +PK GA +W D AIPA
Sbjct: 247 ARDRAAEAGQGVEIAYSIPKEGARMWFDQLAIPA 280
>gi|269967211|ref|ZP_06181276.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio
alginolyticus 40B]
gi|269828201|gb|EEZ82470.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio
alginolyticus 40B]
Length = 344
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 89/213 (41%), Gaps = 44/213 (20%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVIVA 287
DP+ ++ PY WG I Y +S + P++ W D W + ++ +++ R+V
Sbjct: 117 DPKND-YSLPYIWGITGISYNESMVEQ----PVKKWADLWESQYEQQVMLIDDVRDVF-- 169
Query: 288 GGKIAVQQN------------------LALLANQVRLFDSTHYLKAFGIGDVWVAVGWSS 329
+A+++N L L N V L++S + G+ V + W+
Sbjct: 170 --GMALKKNGHSVNTKDEAEIEQAFDSLVALKNNVLLYNSDAPQVPYVSGETSVGMQWNG 227
Query: 330 DVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGQVRGPSPLIHQWIEFCL 389
+ M + V+P+ GA LW D + IP+ S+ L H++I F
Sbjct: 228 NAFQGQVEMPELKFVMPEEGAVLWMDNFTIPSGSK------------NKALAHKFINFMY 275
Query: 390 QTARALPFKQEVIPG-ASPSALESTLVKLPEEL 421
Q+ + E++ SA + KLPEEL
Sbjct: 276 QSEN----QAEIVTSLGYASATNAGRDKLPEEL 304
>gi|414075947|ref|YP_006995265.1| ABC-type spermidine/putrescine transport system periplasmic binding
component [Anabaena sp. 90]
gi|413969363|gb|AFW93452.1| ABC-type spermidine/putrescine transport system periplasmic binding
component [Anabaena sp. 90]
Length = 360
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 72/152 (47%), Gaps = 21/152 (13%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWW--PELAGRISMVNSPREVI 285
DP + ++ P+ WGT + Y K N AP EDW+ W +L R +++N REV+
Sbjct: 133 DPNNR-YSIPFNWGTTGLLYNSEKLTN---AP-EDWEYLWQNQDQLNKRFTLLNDVREVM 187
Query: 286 VAGGKI--------------AVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDV 331
A ++ Q L +L + FD+ + GD+ VA+ +S+D
Sbjct: 188 GATLRMLGYSYNSQNENEVKQAYQKLQILKPAIAAFDTDAWQNKILAGDLAVAMCYSADA 247
Query: 332 LPAVKRMSNVAVVVPKSGASLWADLWAIPAAS 363
+ + + V+P+SG+SLW D IP ++
Sbjct: 248 VKICQENPKLKFVIPRSGSSLWTDTIVIPKSN 279
>gi|398798502|ref|ZP_10557801.1| spermidine/putrescine-binding periplasmic protein [Pantoea sp.
GM01]
gi|398100409|gb|EJL90648.1| spermidine/putrescine-binding periplasmic protein [Pantoea sp.
GM01]
Length = 369
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 74/165 (44%), Gaps = 29/165 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPE----LAG-RISMVNS 280
DP G +A PY WGT IGY K + P++ W PE L G +S +++
Sbjct: 123 DP-GNKYAIPYLWGTTGIGYNVDKVKAALGKDVPLDSWDLVLKPENLEKLKGCGVSFLDA 181
Query: 281 PREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAV 325
P E+ A +L L L +R F S+ Y+ G++ VA+
Sbjct: 182 PEEIFATVLNYLGKDPNSSDAKDYSGAATDLLLKLRPNIRYFHSSQYINDLANGNICVAI 241
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
GWS D+L A R ++ +VPK GA + D++AIP ++
Sbjct: 242 GWSGDILQAKDRADKANNGVHLGYIVPKQGALAFFDMFAIPKDAK 286
>gi|452970892|ref|ZP_21969119.1| putrescine/spermidine ABC transporter substrate-binding protein
[Escherichia coli O157:H7 str. EC4009]
Length = 353
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 73/165 (44%), Gaps = 29/165 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP K +A PY W T IGY K + AP++ W PE + +S +++
Sbjct: 107 DPDNK-FAMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDA 165
Query: 281 PREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAV 325
P EV A +L L L +R F S+ Y+ GD+ VA+
Sbjct: 166 PEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 225
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 226 GWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 270
>gi|288940868|ref|YP_003443108.1| family 1 extracellular solute-binding protein [Allochromatium
vinosum DSM 180]
gi|288896240|gb|ADC62076.1| extracellular solute-binding protein family 1 [Allochromatium
vinosum DSM 180]
Length = 368
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 71/163 (43%), Gaps = 28/163 (17%)
Query: 225 GEIDPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISM 277
+IDP G PY WGT IG K + P++ W + PE A + IS+
Sbjct: 120 AKIDP-GNAHLLPYLWGTTGIGLNPDKVRAALGEDTPLDTWALIFDPEKASKLAGCGISL 178
Query: 278 VNSPREVIVAG----GKI----------AVQQNLALLANQVRLFDSTHYLKAFGIGDVWV 323
++ P EV A GK A + + + +R F S+ Y+ G V
Sbjct: 179 LDDPTEVFAAALVYLGKDPNSQAPEDLEAAAELIKAVRPHIRYFHSSQYISDLANGATCV 238
Query: 324 AVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIP 360
A G+S DVL A +R VA +P+ GA LW D+ AIP
Sbjct: 239 AHGYSGDVLQARERAEEAGKGVTVAYRIPREGAVLWTDVMAIP 281
>gi|428302168|ref|YP_007140474.1| extracellular solute-binding protein [Calothrix sp. PCC 6303]
gi|428238712|gb|AFZ04502.1| extracellular solute-binding protein family 1 [Calothrix sp. PCC
6303]
Length = 365
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 76/180 (42%), Gaps = 35/180 (19%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPE--LAGRISMVNSPREVI 285
DP + ++ P+ WGT Y K P EDW+ W L R++++N REV+
Sbjct: 137 DPNNR-YSIPFTWGTTGFIYNSEKLT----TPPEDWEYIWQNRDILNKRMTLMNDSREVM 191
Query: 286 VAGGKI--------------AVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDV 331
A K+ A + L + + + FD+ + GD+ +A+ +SSD
Sbjct: 192 GAALKMLGYSYNATDETQIKAAYEKLKEIKDSISSFDTDAWRSKIVTGDLDLAMSYSSDA 251
Query: 332 LPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGQVRGPSP-LIHQWIEFCLQ 390
+ K + V+PKSG SLW D I + P+P + WI + LQ
Sbjct: 252 IKLTKENPKLKYVIPKSGTSLWTDTLVIMKTA-------------PNPDGAYAWINYLLQ 298
>gi|359781793|ref|ZP_09285016.1| extracellular solute-binding protein [Pseudomonas psychrotolerans
L19]
gi|359370163|gb|EHK70731.1| extracellular solute-binding protein [Pseudomonas psychrotolerans
L19]
Length = 362
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 71/168 (42%), Gaps = 37/168 (22%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQNH-NLAPIEDWKDPWWPELAGR-----ISMVNSP 281
DP G + PY WGT IGY K + ++ W + PE + +S ++SP
Sbjct: 118 DP-GNQYGVPYLWGTNGIGYNVDKVKAALGTDKLDSWAILFEPENLKKLSKCGVSFMDSP 176
Query: 282 REVIVAGGKIAVQQNLALLANQ-------------------VRLFDSTHYLKAFGIGDVW 322
EV A V Q L L N + F S+ Y+ G++
Sbjct: 177 DEVYPA-----VLQYLGLDPNSTNPDDYKKAEAQLLKVRPYITYFHSSKYISDLANGNIC 231
Query: 323 VAVGWSSDVLPA------VKRMSNVAVVVPKSGASLWADLWAIPAASR 364
VA G+S DV A K+ N+ +PK GA+LW DL AIP ++
Sbjct: 232 VAFGYSGDVFQARSRAEEAKKGVNIGYAIPKEGANLWFDLLAIPKDAK 279
>gi|378767926|ref|YP_005196396.1| putrescine-binding periplasmic protein precursor PotF [Pantoea
ananatis LMG 5342]
gi|386015231|ref|YP_005933511.1| putrescine-binding periplasmic protein precursor PotF [Pantoea
ananatis AJ13355]
gi|386080026|ref|YP_005993551.1| putrescine-binding periplasmic protein PotF [Pantoea ananatis PA13]
gi|327393293|dbj|BAK10715.1| putrescine-binding periplasmic protein precursor PotF [Pantoea
ananatis AJ13355]
gi|354989207|gb|AER33331.1| putrescine-binding periplasmic protein PotF [Pantoea ananatis PA13]
gi|365187409|emb|CCF10359.1| putrescine-binding periplasmic protein precursor PotF [Pantoea
ananatis LMG 5342]
Length = 369
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 72/165 (43%), Gaps = 29/165 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGY--KKSKFQNHNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP G +A PY WGT IGY +K K AP+ W PE + +S +++
Sbjct: 123 DP-GNKYAIPYLWGTTGIGYNVEKVKAALGADAPVNSWDLVLKPENLEKLKSCGVSFLDA 181
Query: 281 PREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAV 325
P E+ A +L L L +R F S+ Y+ G++ VA+
Sbjct: 182 PEEIFATVLNYLGKDPNSSDAKDYSGAATDLLLKLRPNIRYFHSSQYINDLANGNICVAI 241
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
GWS D+L A R N+ VPK GA + D+ AIP ++
Sbjct: 242 GWSGDILQAKNRAEKAKNGVNIGYSVPKEGALAFFDMMAIPKDAK 286
>gi|423128300|ref|ZP_17115979.1| putrescine-binding periplasmic protein [Klebsiella oxytoca 10-5250]
gi|376393656|gb|EHT06312.1| putrescine-binding periplasmic protein [Klebsiella oxytoca 10-5250]
Length = 370
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 86/207 (41%), Gaps = 33/207 (15%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP K +A PY W T IGY K + AP++ W PE + +S +++
Sbjct: 124 DPDNK-YAVPYLWATTGIGYNIDKVKAVLGKDAPLDSWDLVMKPENLEKLKSCGVSFLDA 182
Query: 281 PREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAV 325
P E+ A +L L L +R F S+ Y+ GD+ VA+
Sbjct: 183 PEEIFATVLNYLGKDPNSSKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 242
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIP--AASRLETKQIGGQVRGP 377
GW+ DV A R NV+ +PK GA + D++A+P A ++ E Q + P
Sbjct: 243 GWAGDVWQAANRAKEAKNGVNVSYFIPKEGALAFFDVFAMPADAKNKDEAYQFLNYLMRP 302
Query: 378 SPLIH--QWIEFCLQTARALPFKQEVI 402
+ H + + +LP E I
Sbjct: 303 DVIAHISDHVYYANGNKASLPLVSEEI 329
>gi|425421448|ref|ZP_18802655.1| putrescine-binding periplasmic protein [Escherichia coli 0.1288]
gi|408347112|gb|EKJ61346.1| putrescine-binding periplasmic protein [Escherichia coli 0.1288]
Length = 370
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 73/165 (44%), Gaps = 29/165 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP K +A PY W T IGY K + AP++ W PE + +S +++
Sbjct: 124 DPDNK-FAMPYMWATTGIGYNVDKVKAVLGENAPVDSWNLILKPENLEKLKSCGVSFLDA 182
Query: 281 PREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAV 325
P EV A +L L L +R F S+ Y+ GD+ VA+
Sbjct: 183 PEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 242
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 243 GWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|398791267|ref|ZP_10552012.1| spermidine/putrescine-binding periplasmic protein [Pantoea sp.
YR343]
gi|398215321|gb|EJN01884.1| spermidine/putrescine-binding periplasmic protein [Pantoea sp.
YR343]
Length = 369
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 74/165 (44%), Gaps = 29/165 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPE----LAG-RISMVNS 280
DP G +A PY WGT IGY K + P++ W PE L G +S +++
Sbjct: 123 DP-GNKYAIPYLWGTTGIGYNVDKVKAALGKDVPLDSWDLVLKPENLEKLKGCGVSFLDA 181
Query: 281 PREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAV 325
P E+ A +L L L +R F S+ Y+ G++ VA+
Sbjct: 182 PEEIFATVLNYLGKDPNSSDAKDYSGAATDLLLKLRPNIRYFHSSQYINDLANGNICVAI 241
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
GWS D+L A R ++ +VPK GA + D++AIP ++
Sbjct: 242 GWSGDILQAKDRADKANNGVHLGYIVPKQGALAFFDMFAIPKDAK 286
>gi|270261134|ref|ZP_06189407.1| hypothetical protein SOD_a03590 [Serratia odorifera 4Rx13]
gi|421782671|ref|ZP_16219125.1| putrescine-binding periplasmic protein [Serratia plymuthica A30]
gi|270044618|gb|EFA17709.1| hypothetical protein SOD_a03590 [Serratia odorifera 4Rx13]
gi|407755080|gb|EKF65209.1| putrescine-binding periplasmic protein [Serratia plymuthica A30]
Length = 369
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 69/159 (43%), Gaps = 28/159 (17%)
Query: 234 WAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNSPREVIV 286
+ PY T IGY K + AP++ W PE + +S +++P EV
Sbjct: 128 YGIPYLMVTTGIGYNVDKVKAVLGKDAPVDSWDLILKPENLEKLKSCGVSFLDAPSEVYA 187
Query: 287 --------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAVGWSSDV 331
A +L L L +R F S+ Y+ GD+ VA+GWS DV
Sbjct: 188 TVLHYLGKDPNSTNAADYTGAANDLLLKLRPNIRYFHSSQYINDLANGDICVAIGWSGDV 247
Query: 332 LPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
+ A R NVA +PK GA + D++A+PA ++
Sbjct: 248 MQAANRAKEAKNGVNVAYTIPKEGALTYFDMFAMPADAK 286
>gi|429333574|ref|ZP_19214268.1| extracellular solute-binding protein [Pseudomonas putida CSV86]
gi|428761774|gb|EKX83994.1| extracellular solute-binding protein [Pseudomonas putida CSV86]
Length = 361
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 72/163 (44%), Gaps = 27/163 (16%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKF-QNHNLAPIEDWKDPWWPELAGR-----ISMVNSP 281
DP G + PY WGT IGY K Q + I+ W + PE + ++ ++S
Sbjct: 117 DP-GNRHSVPYLWGTNGIGYNVDKVKQVLGVDHIDSWATLYEPENLKKLQQCGVAFMDSA 175
Query: 282 REVI--------------VAGGKIAVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGW 327
E+I A ++ L L V F S+ Y+ GD+ VA G+
Sbjct: 176 DELIPSILNYLGLDPNSSNAADYAKAEKRLLELRPYVTYFHSSKYISDLANGDICVAFGF 235
Query: 328 SSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIPAASR 364
S DVL A R +A +PK G++LW DL AIPA ++
Sbjct: 236 SGDVLQAANRAREAGNGVKIAYSIPKEGSNLWFDLIAIPADAK 278
>gi|331682363|ref|ZP_08382982.1| putrescine-binding periplasmic protein [Escherichia coli H299]
gi|432390887|ref|ZP_19633745.1| putrescine-binding periplasmic protein [Escherichia coli KTE21]
gi|432615685|ref|ZP_19851812.1| putrescine-binding periplasmic protein [Escherichia coli KTE75]
gi|450186707|ref|ZP_21889625.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily protein [Escherichia coli SEPT362]
gi|331079994|gb|EGI51173.1| putrescine-binding periplasmic protein [Escherichia coli H299]
gi|430921505|gb|ELC42329.1| putrescine-binding periplasmic protein [Escherichia coli KTE21]
gi|431156860|gb|ELE57526.1| putrescine-binding periplasmic protein [Escherichia coli KTE75]
gi|449324226|gb|EMD14163.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily protein [Escherichia coli SEPT362]
Length = 370
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 73/165 (44%), Gaps = 29/165 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP K +A PY W T IGY K + AP++ W PE + +S +++
Sbjct: 124 DPDNK-FAMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDA 182
Query: 281 PREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAV 325
P EV A +L L L +R F S+ Y+ GD+ VA+
Sbjct: 183 PEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 242
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 243 GWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|170682561|ref|YP_001742962.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli SMS-3-5]
gi|218699230|ref|YP_002406859.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
coli IAI39]
gi|222155578|ref|YP_002555717.1| Putrescine-binding periplasmic protein [Escherichia coli LF82]
gi|386623257|ref|YP_006142985.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
coli O7:K1 str. CE10]
gi|387616110|ref|YP_006119132.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
coli O83:H1 str. NRG 857C]
gi|170520279|gb|ACB18457.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli SMS-3-5]
gi|218369216|emb|CAR16971.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli IAI39]
gi|222032583|emb|CAP75322.1| Putrescine-binding periplasmic protein [Escherichia coli LF82]
gi|312945371|gb|ADR26198.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O83:H1 str. NRG 857C]
gi|349736995|gb|AEQ11701.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O7:K1 str. CE10]
Length = 370
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 73/165 (44%), Gaps = 29/165 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP K +A PY W T IGY K + AP++ W PE + +S +++
Sbjct: 124 DPDNK-FAMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDA 182
Query: 281 PREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAV 325
P EV A +L L L +R F S+ Y+ GD+ VA+
Sbjct: 183 PEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 242
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 243 GWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|398824613|ref|ZP_10582939.1| spermidine/putrescine-binding periplasmic protein [Bradyrhizobium
sp. YR681]
gi|398224754|gb|EJN11050.1| spermidine/putrescine-binding periplasmic protein [Bradyrhizobium
sp. YR681]
Length = 370
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 76/165 (46%), Gaps = 30/165 (18%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAP---IEDWKDPWWPELAGR-----ISMVN 279
DP G ++AA Y WGT IGY +K + L P I+ W + PE + + M++
Sbjct: 125 DP-GNVYAANYMWGTTGIGYNVAKVK-QILGPDAKIDSWDIVFKPENLAKFKDCGVHMLD 182
Query: 280 SPREVIVAG-GKIAVQQN-------------LALLANQVRLFDSTHYLKAFGIGDVWVAV 325
S ++ A + + N +A + VR F S+ YL A G++ V
Sbjct: 183 SADDIFPAALSYLGLDPNSTKQADLEKAADIVAKVRPSVRKFHSSEYLSALATGEICFVV 242
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
GWS D++ A R + + +PK GA ++ D AIPA ++
Sbjct: 243 GWSGDIMQARARAAEAKSGVEIGYTIPKEGAQMFFDNLAIPADAK 287
>gi|218704278|ref|YP_002411797.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
coli UMN026]
gi|293404158|ref|ZP_06648152.1| putrescine transporter subunit protein [Escherichia coli FVEC1412]
gi|293409229|ref|ZP_06652805.1| hypothetical protein ECEG_00160 [Escherichia coli B354]
gi|298379941|ref|ZP_06989546.1| putrescine transporter [Escherichia coli FVEC1302]
gi|331662266|ref|ZP_08363189.1| putrescine-binding periplasmic protein [Escherichia coli TA143]
gi|416896433|ref|ZP_11926280.1| putrescine-binding periplasmic protein [Escherichia coli STEC_7v]
gi|417118740|ref|ZP_11969258.1| putrescine-binding periplasmic protein [Escherichia coli 1.2741]
gi|417137151|ref|ZP_11980941.1| putrescine-binding periplasmic protein [Escherichia coli 97.0259]
gi|417307307|ref|ZP_12094179.1| Putrescine-binding periplasmic protein [Escherichia coli PCN033]
gi|417585791|ref|ZP_12236564.1| putrescine-binding periplasmic protein [Escherichia coli
STEC_C165-02]
gi|419936211|ref|ZP_14453231.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli 576-1]
gi|422332326|ref|ZP_16413340.1| putrescine-binding periplasmic protein [Escherichia coli 4_1_47FAA]
gi|422970756|ref|ZP_16974268.1| putrescine-binding periplasmic protein [Escherichia coli TA124]
gi|424815776|ref|ZP_18240927.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia fergusonii ECD227]
gi|432352815|ref|ZP_19596099.1| putrescine-binding periplasmic protein [Escherichia coli KTE2]
gi|432401049|ref|ZP_19643803.1| putrescine-binding periplasmic protein [Escherichia coli KTE26]
gi|432425105|ref|ZP_19667620.1| putrescine-binding periplasmic protein [Escherichia coli KTE181]
gi|432459876|ref|ZP_19702033.1| putrescine-binding periplasmic protein [Escherichia coli KTE204]
gi|432474965|ref|ZP_19716973.1| putrescine-binding periplasmic protein [Escherichia coli KTE208]
gi|432488498|ref|ZP_19730383.1| putrescine-binding periplasmic protein [Escherichia coli KTE213]
gi|432521547|ref|ZP_19758703.1| putrescine-binding periplasmic protein [Escherichia coli KTE228]
gi|432536914|ref|ZP_19773831.1| putrescine-binding periplasmic protein [Escherichia coli KTE235]
gi|432601390|ref|ZP_19837639.1| putrescine-binding periplasmic protein [Escherichia coli KTE66]
gi|432630475|ref|ZP_19866419.1| putrescine-binding periplasmic protein [Escherichia coli KTE80]
gi|432640073|ref|ZP_19875913.1| putrescine-binding periplasmic protein [Escherichia coli KTE83]
gi|432665142|ref|ZP_19900728.1| putrescine-binding periplasmic protein [Escherichia coli KTE116]
gi|432679277|ref|ZP_19914676.1| putrescine-binding periplasmic protein [Escherichia coli KTE143]
gi|432717897|ref|ZP_19952892.1| putrescine-binding periplasmic protein [Escherichia coli KTE9]
gi|432769704|ref|ZP_20004057.1| putrescine-binding periplasmic protein [Escherichia coli KTE50]
gi|432774047|ref|ZP_20008333.1| putrescine-binding periplasmic protein [Escherichia coli KTE54]
gi|432838517|ref|ZP_20072006.1| putrescine-binding periplasmic protein [Escherichia coli KTE140]
gi|432849312|ref|ZP_20080534.1| putrescine-binding periplasmic protein [Escherichia coli KTE144]
gi|432860597|ref|ZP_20085736.1| putrescine-binding periplasmic protein [Escherichia coli KTE146]
gi|432873898|ref|ZP_20093166.1| putrescine-binding periplasmic protein [Escherichia coli KTE147]
gi|432885269|ref|ZP_20099864.1| putrescine-binding periplasmic protein [Escherichia coli KTE158]
gi|432911212|ref|ZP_20117693.1| putrescine-binding periplasmic protein [Escherichia coli KTE190]
gi|432960421|ref|ZP_20150552.1| putrescine-binding periplasmic protein [Escherichia coli KTE202]
gi|433017829|ref|ZP_20206090.1| putrescine-binding periplasmic protein [Escherichia coli KTE105]
gi|433052230|ref|ZP_20239456.1| putrescine-binding periplasmic protein [Escherichia coli KTE122]
gi|433062100|ref|ZP_20249057.1| putrescine-binding periplasmic protein [Escherichia coli KTE125]
gi|433067109|ref|ZP_20253934.1| putrescine-binding periplasmic protein [Escherichia coli KTE128]
gi|433157839|ref|ZP_20342704.1| putrescine-binding periplasmic protein [Escherichia coli KTE177]
gi|433177391|ref|ZP_20361841.1| putrescine-binding periplasmic protein [Escherichia coli KTE82]
gi|433202398|ref|ZP_20386195.1| putrescine-binding periplasmic protein [Escherichia coli KTE95]
gi|218431375|emb|CAR12253.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli UMN026]
gi|291428744|gb|EFF01769.1| putrescine transporter subunit protein [Escherichia coli FVEC1412]
gi|291469697|gb|EFF12181.1| hypothetical protein ECEG_00160 [Escherichia coli B354]
gi|298279639|gb|EFI21147.1| putrescine transporter [Escherichia coli FVEC1302]
gi|325496796|gb|EGC94655.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia fergusonii ECD227]
gi|327253641|gb|EGE65270.1| putrescine-binding periplasmic protein [Escherichia coli STEC_7v]
gi|331060688|gb|EGI32652.1| putrescine-binding periplasmic protein [Escherichia coli TA143]
gi|338771178|gb|EGP25926.1| Putrescine-binding periplasmic protein [Escherichia coli PCN033]
gi|345338947|gb|EGW71373.1| putrescine-binding periplasmic protein [Escherichia coli
STEC_C165-02]
gi|371599786|gb|EHN88566.1| putrescine-binding periplasmic protein [Escherichia coli TA124]
gi|373246637|gb|EHP66089.1| putrescine-binding periplasmic protein [Escherichia coli 4_1_47FAA]
gi|386138274|gb|EIG79434.1| putrescine-binding periplasmic protein [Escherichia coli 1.2741]
gi|386158715|gb|EIH15048.1| putrescine-binding periplasmic protein [Escherichia coli 97.0259]
gi|388401680|gb|EIL62308.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli 576-1]
gi|430877743|gb|ELC01177.1| putrescine-binding periplasmic protein [Escherichia coli KTE2]
gi|430927647|gb|ELC48210.1| putrescine-binding periplasmic protein [Escherichia coli KTE26]
gi|430958339|gb|ELC76933.1| putrescine-binding periplasmic protein [Escherichia coli KTE181]
gi|430991159|gb|ELD07575.1| putrescine-binding periplasmic protein [Escherichia coli KTE204]
gi|431008473|gb|ELD23274.1| putrescine-binding periplasmic protein [Escherichia coli KTE208]
gi|431023066|gb|ELD36323.1| putrescine-binding periplasmic protein [Escherichia coli KTE213]
gi|431044611|gb|ELD54883.1| putrescine-binding periplasmic protein [Escherichia coli KTE228]
gi|431072491|gb|ELD80242.1| putrescine-binding periplasmic protein [Escherichia coli KTE235]
gi|431143223|gb|ELE44961.1| putrescine-binding periplasmic protein [Escherichia coli KTE66]
gi|431173510|gb|ELE73586.1| putrescine-binding periplasmic protein [Escherichia coli KTE80]
gi|431184589|gb|ELE84346.1| putrescine-binding periplasmic protein [Escherichia coli KTE83]
gi|431203547|gb|ELF02204.1| putrescine-binding periplasmic protein [Escherichia coli KTE116]
gi|431224337|gb|ELF21564.1| putrescine-binding periplasmic protein [Escherichia coli KTE143]
gi|431265576|gb|ELF57140.1| putrescine-binding periplasmic protein [Escherichia coli KTE9]
gi|431317786|gb|ELG05562.1| putrescine-binding periplasmic protein [Escherichia coli KTE50]
gi|431320045|gb|ELG07697.1| putrescine-binding periplasmic protein [Escherichia coli KTE54]
gi|431390983|gb|ELG74631.1| putrescine-binding periplasmic protein [Escherichia coli KTE140]
gi|431401312|gb|ELG84656.1| putrescine-binding periplasmic protein [Escherichia coli KTE144]
gi|431404493|gb|ELG87744.1| putrescine-binding periplasmic protein [Escherichia coli KTE147]
gi|431407581|gb|ELG90792.1| putrescine-binding periplasmic protein [Escherichia coli KTE146]
gi|431419252|gb|ELH01610.1| putrescine-binding periplasmic protein [Escherichia coli KTE158]
gi|431443928|gb|ELH24953.1| putrescine-binding periplasmic protein [Escherichia coli KTE190]
gi|431478108|gb|ELH57867.1| putrescine-binding periplasmic protein [Escherichia coli KTE202]
gi|431536201|gb|ELI12532.1| putrescine-binding periplasmic protein [Escherichia coli KTE105]
gi|431575006|gb|ELI47763.1| putrescine-binding periplasmic protein [Escherichia coli KTE122]
gi|431587016|gb|ELI58398.1| putrescine-binding periplasmic protein [Escherichia coli KTE125]
gi|431589815|gb|ELI61021.1| putrescine-binding periplasmic protein [Escherichia coli KTE128]
gi|431681215|gb|ELJ47021.1| putrescine-binding periplasmic protein [Escherichia coli KTE177]
gi|431709300|gb|ELJ73770.1| putrescine-binding periplasmic protein [Escherichia coli KTE82]
gi|431725038|gb|ELJ88949.1| putrescine-binding periplasmic protein [Escherichia coli KTE95]
Length = 370
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 73/165 (44%), Gaps = 29/165 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP K +A PY W T IGY K + AP++ W PE + +S +++
Sbjct: 124 DPDNK-FAMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDA 182
Query: 281 PREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAV 325
P EV A +L L L +R F S+ Y+ GD+ VA+
Sbjct: 183 PEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 242
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 243 GWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|82776067|ref|YP_402414.1| putrescine ABC transporter periplasmic-binding protein [Shigella
dysenteriae Sd197]
gi|309786474|ref|ZP_07681098.1| putrescine-binding periplasmic protein [Shigella dysenteriae 1617]
gi|81240215|gb|ABB60925.1| periplasmic putrescine-binding protein [Shigella dysenteriae Sd197]
gi|308925662|gb|EFP71145.1| putrescine-binding periplasmic protein [Shigella dysenteriae 1617]
Length = 370
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 73/165 (44%), Gaps = 29/165 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP K +A PY W T IGY K + AP++ W PE + +S +++
Sbjct: 124 DPDNK-FAMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDA 182
Query: 281 PREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAV 325
P EV A +L L L +R F S+ Y+ GD+ VA+
Sbjct: 183 PEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 242
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 243 GWAGDVWQASNRAKEANNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|326797025|ref|YP_004314845.1| extracellular solute-binding protein [Marinomonas mediterranea
MMB-1]
gi|326547789|gb|ADZ93009.1| extracellular solute-binding protein family 1 [Marinomonas
mediterranea MMB-1]
Length = 373
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 73/167 (43%), Gaps = 31/167 (18%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP G PY WG+ IGY K + + AP++ W + E + + ++S
Sbjct: 125 DP-GNEHGVPYMWGSTGIGYNVDKVKEVLGDDAPVDSWDLVFKAENMKKLQSCGVMFLDS 183
Query: 281 PREVI-VAGGKIAVQQN----------------LALLANQVRLFDSTHYLKAFGIGDVWV 323
P E+ +A + N L + VR F S+ Y+ A G++ V
Sbjct: 184 PDELYPLALNYVGKNPNSHDRKDYSTDSEAAKVLKSVRPYVRQFHSSQYISALANGEICV 243
Query: 324 AVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
A+GWS DV+ A R S N+ +PK G +W D+ AIP ++
Sbjct: 244 AIGWSGDVIQAQDRASEAENGVNIEYSIPKEGTQIWFDMLAIPKGAK 290
>gi|333898571|ref|YP_004472444.1| extracellular solute-binding protein [Pseudomonas fulva 12-X]
gi|333113836|gb|AEF20350.1| extracellular solute-binding protein family 1 [Pseudomonas fulva
12-X]
Length = 364
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 71/161 (44%), Gaps = 26/161 (16%)
Query: 226 EIDPRGKIWAAPYRWGTMAIGYKKSKFQN-HNLAPIEDWKDPWWPELAGR-----ISMVN 279
E + G +A PY WGT IGY +K + + I+ W + P+ + +S ++
Sbjct: 117 ETNDPGNQYAVPYLWGTNGIGYNVAKVKEVLGVDKIDSWAVLFEPQNMKKLASCGVSFMD 176
Query: 280 SPREVI--------------VAGGKIAVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAV 325
S EVI A + L + + F S+ Y+ G++ VA
Sbjct: 177 SADEVIPSVLNYLGLDPNSQSADDYAKAEAKLMEVRPYISYFHSSKYISDLANGNICVAF 236
Query: 326 GWSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIP 360
G+S DVL A R + +A +PK GA+LW D+ AIP
Sbjct: 237 GYSGDVLQAADRAAEAGKGVEIAYAIPKEGANLWFDMLAIP 277
>gi|227820909|ref|YP_002824879.1| spermidine/putrescine ABC transporter substrate-binding protein
[Sinorhizobium fredii NGR234]
gi|227339908|gb|ACP24126.1| spermidine/putrescine ABC transporter, periplasmic
substrate-binding protein [Sinorhizobium fredii NGR234]
Length = 364
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 115/263 (43%), Gaps = 50/263 (19%)
Query: 139 RVVSLQN---SVPQSWVKDFMRSQGKRLKF---------QMNLCASIDGIVNNLSTPFNK 186
RVV++ N + +S +++F + G ++ + + L A G ++ P
Sbjct: 26 RVVNVYNWSDYIDESILEEFTKETGIKVVYDVFDSNEILETKLLAGGSGY--DVVVP--- 80
Query: 187 LSFAIKKRFIEPIAEAEDQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIG 246
++ ++++ + + D+ LS+ W + L + DP G +A Y WGT IG
Sbjct: 81 TAYFLQRQIAAGVFQKLDKSKLPNLSNMWDLILERT--AKYDP-GNEYAVDYMWGTTGIG 137
Query: 247 YKKSKFQ---NHNLAPIEDWKDPWWPELAGR-----ISMVNSPREVIVAG---------- 288
Y K + + P +W + PE+A + I +++SP ++I +
Sbjct: 138 YNVDKMKEILGTDAKP--NWDVIFNPEIAAKFKDCGIHLLDSPTDIIPSALAYLGLNPDS 195
Query: 289 ---GKIAVQQNLALLAN-QVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS----- 339
+ ++ L +R F S+ Y+ A GD+ +AVG+S D+ A R +
Sbjct: 196 HDPADLEKAADVLLKVRPYIRKFHSSEYINALANGDICLAVGFSGDIFQARDRAAEAKAG 255
Query: 340 -NVAVVVPKSGASLWADLWAIPA 361
V +P GA +W D+ A+PA
Sbjct: 256 VTVDYSIPAQGAQMWFDMLAMPA 278
>gi|226946878|ref|YP_002801951.1| polyamine transporter periplasmic protein PotF [Azotobacter
vinelandii DJ]
gi|226721805|gb|ACO80976.1| Polyamine transporter periplasmic protein PotF [Azotobacter
vinelandii DJ]
Length = 371
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 76/166 (45%), Gaps = 32/166 (19%)
Query: 228 DPRGKIWAAPYRWGTMAIGYK----KSKFQNHNLAPIEDWKDPWWPE-----LAGRISMV 278
DP G +A PY WGT+ IGY K+ +H AP++ W + PE A +S +
Sbjct: 126 DP-GNQYAVPYMWGTIGIGYNVDKVKAALGDH--APVDSWDLVFKPENIEKLKACGVSFL 182
Query: 279 NSPREVIVAG-------------GKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVA 324
+SP E++ A ++ + L L + V F S+ Y+ GD VA
Sbjct: 183 DSPTEMLPAALHYLGFAPDSGNPEELKKAEELFLKIRPNVAYFHSSKYISDLANGDTCVA 242
Query: 325 VGWSSDVLPAVKRMSNV------AVVVPKSGASLWADLWAIPAASR 364
VG+S D+ + R V +PK GA + D+ AIPA ++
Sbjct: 243 VGYSGDIYQSKARAEEVGNNVKIGYSIPKEGAGSFFDVLAIPADAK 288
>gi|238795802|ref|ZP_04639315.1| Putrescine-binding periplasmic protein [Yersinia mollaretii ATCC
43969]
gi|238720265|gb|EEQ12068.1| Putrescine-binding periplasmic protein [Yersinia mollaretii ATCC
43969]
Length = 369
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 74/165 (44%), Gaps = 29/165 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGY--KKSKFQNHNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP K +A PY W T IGY +K K AP+ W PE + +S +++
Sbjct: 123 DPDNK-FAIPYLWATTGIGYNVEKVKAALGKDAPVNSWDLVLKPENLEKLKSCGVSFLDA 181
Query: 281 PREV--------------IVAGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAV 325
P E+ I A L L L +R F S+ Y+ GD+ VAV
Sbjct: 182 PSEIFATVLNYLGKDPNSIQATDYTGPATELLLKLRPNIRYFHSSQYINDLANGDICVAV 241
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
GW+ D++ A R NVA +PK GA + D++A+P+ ++
Sbjct: 242 GWAGDIMQASNRAKEAKNGVNVAYSIPKEGALAFFDVFAMPSDAK 286
>gi|398995885|ref|ZP_10698753.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM21]
gi|398128443|gb|EJM17832.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM21]
Length = 365
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 98/220 (44%), Gaps = 35/220 (15%)
Query: 235 AAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNSPREVIVA 287
A PY WG++ IG+ +K + AP W + PE A + IS ++SP E++ A
Sbjct: 126 AFPYMWGSIGIGFNPAKVKEVLGANAPTNSWDLLFKPENAEKLKACGISFLDSPTEMLPA 185
Query: 288 G-------------GKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLP 333
G+IA + L + + V F S+ Y+ G++ VAVG+S DVL
Sbjct: 186 ALHYLGYPVNSQDKGQIAEAEALFMKIRPSVAYFHSSKYISDLANGNICVAVGYSGDVLQ 245
Query: 334 AVKRMSN------VAVVVPKSGASLWADLWAIP-AASRLETKQIGGQVRGPSPLIHQW-- 384
A R + +PK GA + D+ AIP A+ +E + +I +
Sbjct: 246 AKARAQESGNSVQIDYSIPKEGAGSFYDMVAIPRDAANVENAYLFMNFLMRPDIIAEITN 305
Query: 385 -IEFCLQTARALPFKQEVI---PGASPSA-LESTLVKLPE 419
I + A A P E I PG+ PS + +TL +P+
Sbjct: 306 NIGYSNANAAATPLVDEAIRDDPGSYPSQDVMATLYAIPD 345
>gi|399001732|ref|ZP_10704442.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM18]
gi|398126856|gb|EJM16279.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM18]
Length = 365
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 97/220 (44%), Gaps = 35/220 (15%)
Query: 235 AAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNSPREVIVA 287
A PY WG++ IG+ +K + AP+ W + PE A + IS ++SP E++ A
Sbjct: 126 AFPYMWGSIGIGFNPAKVKEVLGTDAPVNSWDLLFKPENAAKLKACGISFLDSPTEMLPA 185
Query: 288 G-------------GKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLP 333
+IA + L + + V F S+ Y+ G++ VAVG+S DVL
Sbjct: 186 ALHYLGYPVNSRDKAQIAEAEALFMKIRPSVAYFHSSKYISDLANGNICVAVGYSGDVLQ 245
Query: 334 AVKRMSN------VAVVVPKSGASLWADLWAIP--AASRLETKQIGGQVRGPSPL--IHQ 383
A R + +PK GA + D+ AIP AA+ + P + +
Sbjct: 246 AKARAQEAGDKVKIEYSIPKEGAGSFYDMVAIPRDAANVDNAYLFMNFLMRPDIIAEVTN 305
Query: 384 WIEFCLQTARALPFKQEVI---PGAS-PSALESTLVKLPE 419
I + A A P E I PG+ P A+ +TL +P+
Sbjct: 306 SIGYSNANAAATPLVDEAIRDDPGSYPPQAVMATLYAIPD 345
>gi|389680701|ref|ZP_10172050.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas chlororaphis O6]
gi|388555288|gb|EIM18532.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas chlororaphis O6]
Length = 365
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 74/165 (44%), Gaps = 28/165 (16%)
Query: 223 DAGEIDPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----I 275
+A DP G A PY WG++ IGY K + + AP W + PE A + I
Sbjct: 115 NAAASDP-GNAHAFPYMWGSIGIGYNPDKVKAVLGSDAPTNSWDLLFKPENAEKLKACGI 173
Query: 276 SMVNSPREVIVAG-----------GKIAVQQNLALLAN---QVRLFDSTHYLKAFGIGDV 321
S ++SP E++ A K + + AL V F S+ Y+ G++
Sbjct: 174 SFLDSPTEMLPAALHYLGYPVTSKDKAQILEAEALFMKIRPSVTYFHSSKYISDLANGNI 233
Query: 322 WVAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIP 360
VAVG+S DVL A R VA +PK GA + D+ A+P
Sbjct: 234 CVAVGYSGDVLQARSRAEEAGNKEKVAFSIPKEGAGSFYDMMAMP 278
>gi|419917933|ref|ZP_14436152.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli KD2]
gi|432792074|ref|ZP_20026164.1| putrescine-binding periplasmic protein [Escherichia coli KTE78]
gi|432798037|ref|ZP_20032062.1| putrescine-binding periplasmic protein [Escherichia coli KTE79]
gi|388392734|gb|EIL54143.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli KD2]
gi|431341656|gb|ELG28662.1| putrescine-binding periplasmic protein [Escherichia coli KTE78]
gi|431345059|gb|ELG31991.1| putrescine-binding periplasmic protein [Escherichia coli KTE79]
Length = 370
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 73/165 (44%), Gaps = 29/165 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP K +A PY W T IGY K + AP++ W PE + +S +++
Sbjct: 124 DPDNK-FAMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDA 182
Query: 281 PREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAV 325
P EV A +L L L +R F S+ Y+ GD+ VA+
Sbjct: 183 PEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 242
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 243 GWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|218548373|ref|YP_002382164.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
fergusonii ATCC 35469]
gi|218355914|emb|CAQ88529.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia fergusonii ATCC 35469]
Length = 370
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 73/165 (44%), Gaps = 29/165 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP K +A PY W T IGY K + AP++ W PE + +S +++
Sbjct: 124 DPDNK-FAMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDA 182
Query: 281 PREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAV 325
P EV A +L L L +R F S+ Y+ GD+ VA+
Sbjct: 183 PEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 242
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 243 GWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|422806126|ref|ZP_16854558.1| extracellular solute-binding protein [Escherichia fergusonii B253]
gi|324112664|gb|EGC06640.1| extracellular solute-binding protein [Escherichia fergusonii B253]
Length = 370
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 73/165 (44%), Gaps = 29/165 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP K +A PY W T IGY K + AP++ W PE + +S +++
Sbjct: 124 DPDNK-FAMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDA 182
Query: 281 PREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAV 325
P EV A +L L L +R F S+ Y+ GD+ VA+
Sbjct: 183 PEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 242
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 243 GWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|383772683|ref|YP_005451749.1| substrate-binding protein [Bradyrhizobium sp. S23321]
gi|381360807|dbj|BAL77637.1| substrate-binding protein [Bradyrhizobium sp. S23321]
Length = 370
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 90/204 (44%), Gaps = 30/204 (14%)
Query: 188 SFAIKKRFIEPIAEAEDQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIGY 247
++ ++++ I + D+ L + W V + G DP G ++AA Y WGT IGY
Sbjct: 87 AYFLQRQIKANIFQKLDKAKLPNLGNAWPVVTQR--LGIYDP-GNVYAANYMWGTTGIGY 143
Query: 248 KKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNSPREVIVAG-------GKIAV 293
+K + A I+ W + PE + + M++S ++ A
Sbjct: 144 NVAKLKQILGADARIDSWDIVFKPENLSKFRDCGVHMLDSADDIFPAALSWLGLDPNSTK 203
Query: 294 QQNLALLAN-------QVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------N 340
Q +L A+ VR F S+ YL A G++ VGWS D++ A R +
Sbjct: 204 QADLEKAADVVAKVRPSVRKFHSSEYLSALATGEICFVVGWSGDIMQARARAAEAKSGIE 263
Query: 341 VAVVVPKSGASLWADLWAIPAASR 364
+ +PK GA ++ D AIPA ++
Sbjct: 264 IGYTIPKEGAQMFFDNLAIPADAK 287
>gi|422830736|ref|ZP_16878890.1| putrescine-binding periplasmic protein [Escherichia coli B093]
gi|371603842|gb|EHN92477.1| putrescine-binding periplasmic protein [Escherichia coli B093]
Length = 370
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 73/165 (44%), Gaps = 29/165 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP K +A PY W T IGY K + AP++ W PE + +S +++
Sbjct: 124 DPDNK-FAMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDA 182
Query: 281 PREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAV 325
P EV A +L L L +R F S+ Y+ GD+ VA+
Sbjct: 183 PEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 242
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 243 GWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|333926484|ref|YP_004500063.1| family 1 extracellular solute-binding protein [Serratia sp. AS12]
gi|333931437|ref|YP_004505015.1| ABC transporter substrate-binding protein [Serratia plymuthica AS9]
gi|386328307|ref|YP_006024477.1| extracellular solute-binding protein [Serratia sp. AS13]
gi|333473044|gb|AEF44754.1| extracellular solute-binding protein family 1 [Serratia plymuthica
AS9]
gi|333490544|gb|AEF49706.1| extracellular solute-binding protein family 1 [Serratia sp. AS12]
gi|333960640|gb|AEG27413.1| extracellular solute-binding protein family 1 [Serratia sp. AS13]
Length = 369
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 69/159 (43%), Gaps = 28/159 (17%)
Query: 234 WAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNSPREVIV 286
+ PY T IGY K + AP++ W PE + +S +++P EV
Sbjct: 128 YGIPYLMVTTGIGYNVDKVKAVLGKDAPVDSWDLILKPENLEKLKSCGVSFLDAPSEVYA 187
Query: 287 --------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAVGWSSDV 331
A +L L L +R F S+ Y+ GD+ VA+GWS DV
Sbjct: 188 TVLHYLGKDPNSTNAADYTGAANDLLLKLRPNIRYFHSSQYINDLANGDICVAIGWSGDV 247
Query: 332 LPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
+ A R NVA +PK GA + D++A+PA ++
Sbjct: 248 MQAANRAKEAKNGVNVAYAIPKEGALTYFDMFAMPADAK 286
>gi|157157062|ref|YP_001462051.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
coli E24377A]
gi|307311758|ref|ZP_07591398.1| extracellular solute-binding protein family 1 [Escherichia coli W]
gi|378713742|ref|YP_005278635.1| extracellular solute-binding protein [Escherichia coli KO11FL]
gi|386608222|ref|YP_006123708.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
coli W]
gi|386702331|ref|YP_006166168.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
coli KO11FL]
gi|386708666|ref|YP_006172387.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
coli W]
gi|417161332|ref|ZP_11997568.1| putrescine-binding periplasmic protein [Escherichia coli 99.0741]
gi|419369124|ref|ZP_13910250.1| putrescine-binding periplasmic protein [Escherichia coli DEC14A]
gi|419928713|ref|ZP_14446420.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli 541-1]
gi|422959017|ref|ZP_16970948.1| putrescine-binding periplasmic protein [Escherichia coli H494]
gi|432764176|ref|ZP_19998624.1| putrescine-binding periplasmic protein [Escherichia coli KTE48]
gi|450212610|ref|ZP_21894582.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
coli O08]
gi|157079092|gb|ABV18800.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli E24377A]
gi|306908313|gb|EFN38812.1| extracellular solute-binding protein family 1 [Escherichia coli W]
gi|315060139|gb|ADT74466.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli W]
gi|323379303|gb|ADX51571.1| extracellular solute-binding protein family 1 [Escherichia coli
KO11FL]
gi|371595673|gb|EHN84521.1| putrescine-binding periplasmic protein [Escherichia coli H494]
gi|378220799|gb|EHX81050.1| putrescine-binding periplasmic protein [Escherichia coli DEC14A]
gi|383393858|gb|AFH18816.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli KO11FL]
gi|383404358|gb|AFH10601.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli W]
gi|386173868|gb|EIH45869.1| putrescine-binding periplasmic protein [Escherichia coli 99.0741]
gi|388405079|gb|EIL65516.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli 541-1]
gi|431312755|gb|ELG00744.1| putrescine-binding periplasmic protein [Escherichia coli KTE48]
gi|449321719|gb|EMD11729.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
coli O08]
Length = 370
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 73/165 (44%), Gaps = 29/165 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP K +A PY W T IGY K + AP++ W PE + +S +++
Sbjct: 124 DPDNK-FAMPYMWATTGIGYNVDKVKAVLGENAPVDSWNLILKPENLEKLKSCGVSFLDA 182
Query: 281 PREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAV 325
P EV A +L L L +R F S+ Y+ GD+ VA+
Sbjct: 183 PEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 242
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 243 GWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|432977512|ref|ZP_20166335.1| putrescine-binding periplasmic protein [Escherichia coli KTE209]
gi|433086463|ref|ZP_20272858.1| putrescine-binding periplasmic protein [Escherichia coli KTE137]
gi|431481023|gb|ELH60737.1| putrescine-binding periplasmic protein [Escherichia coli KTE209]
gi|431609120|gb|ELI78453.1| putrescine-binding periplasmic protein [Escherichia coli KTE137]
Length = 370
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 73/165 (44%), Gaps = 29/165 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP K +A PY W T IGY K + AP++ W PE + +S +++
Sbjct: 124 DPDNK-FAMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDA 182
Query: 281 PREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAV 325
P EV A +L L L +R F S+ Y+ GD+ VA+
Sbjct: 183 PEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 242
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 243 GWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|423139332|ref|ZP_17126970.1| bacterial extracellular solute-binding protein [Salmonella enterica
subsp. houtenae str. ATCC BAA-1581]
gi|379051886|gb|EHY69777.1| bacterial extracellular solute-binding protein [Salmonella enterica
subsp. houtenae str. ATCC BAA-1581]
Length = 371
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 72/165 (43%), Gaps = 29/165 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP K +A PY W T IGY K + + AP+ W PE + +S +++
Sbjct: 125 DPDNK-YAMPYMWATTGIGYNVDKVKAVLGDDAPVNSWDLVLKPENLEKLKSCGVSFLDA 183
Query: 281 PREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAV 325
P E+ A +L L L +R F S+ Y+ GD VA+
Sbjct: 184 PEEIFATVLNYLGKDPNSSKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDTCVAI 243
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
GW+ DV A R N+A +PK GA + D++A+PA ++
Sbjct: 244 GWAGDVWQAANRAKEAKNGVNIAFSIPKEGAMAFFDVFAMPADAK 288
>gi|386613073|ref|YP_006132739.1| putrescine-binding periplasmic protein PotF [Escherichia coli
UMNK88]
gi|332342242|gb|AEE55576.1| putrescine-binding periplasmic protein PotF [Escherichia coli
UMNK88]
Length = 370
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 73/165 (44%), Gaps = 29/165 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP K +A PY W T IGY K + AP++ W PE + +S +++
Sbjct: 124 DPDNK-FAMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDA 182
Query: 281 PREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAV 325
P EV A +L L L +R F S+ Y+ GD+ VA+
Sbjct: 183 PEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 242
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 243 GWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|432801133|ref|ZP_20035118.1| putrescine-binding periplasmic protein [Escherichia coli KTE84]
gi|431350368|gb|ELG37180.1| putrescine-binding periplasmic protein [Escherichia coli KTE84]
Length = 370
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 73/165 (44%), Gaps = 29/165 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP K +A PY W T IGY K + AP++ W PE + +S +++
Sbjct: 124 DPDNK-FAMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDA 182
Query: 281 PREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAV 325
P EV A +L L L +R F S+ Y+ GD+ VA+
Sbjct: 183 PEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 242
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 243 GWAGDVWQASNRAKEGKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|387611396|ref|YP_006114512.1| putrescine ABC transporter, substrate-binding protein [Escherichia
coli ETEC H10407]
gi|404374179|ref|ZP_10979398.1| putrescine-binding periplasmic protein [Escherichia sp. 1_1_43]
gi|432368912|ref|ZP_19612013.1| putrescine-binding periplasmic protein [Escherichia coli KTE10]
gi|432484548|ref|ZP_19726468.1| putrescine-binding periplasmic protein [Escherichia coli KTE212]
gi|432669800|ref|ZP_19905340.1| putrescine-binding periplasmic protein [Escherichia coli KTE119]
gi|432880589|ref|ZP_20097124.1| putrescine-binding periplasmic protein [Escherichia coli KTE154]
gi|433172684|ref|ZP_20357237.1| putrescine-binding periplasmic protein [Escherichia coli KTE232]
gi|309701132|emb|CBJ00430.1| putrescine ABC transporter, substrate-binding protein [Escherichia
coli ETEC H10407]
gi|404292237|gb|EJZ49066.1| putrescine-binding periplasmic protein [Escherichia sp. 1_1_43]
gi|430888124|gb|ELC10847.1| putrescine-binding periplasmic protein [Escherichia coli KTE10]
gi|431017699|gb|ELD31154.1| putrescine-binding periplasmic protein [Escherichia coli KTE212]
gi|431212330|gb|ELF10257.1| putrescine-binding periplasmic protein [Escherichia coli KTE119]
gi|431412817|gb|ELG95616.1| putrescine-binding periplasmic protein [Escherichia coli KTE154]
gi|431695675|gb|ELJ60977.1| putrescine-binding periplasmic protein [Escherichia coli KTE232]
Length = 370
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 73/165 (44%), Gaps = 29/165 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP K +A PY W T IGY K + AP++ W PE + +S +++
Sbjct: 124 DPDNK-FAMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDA 182
Query: 281 PREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAV 325
P EV A +L L L +R F S+ Y+ GD+ VA+
Sbjct: 183 PEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 242
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 243 GWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|399040652|ref|ZP_10735990.1| spermidine/putrescine-binding periplasmic protein [Rhizobium sp.
CF122]
gi|398061439|gb|EJL53235.1| spermidine/putrescine-binding periplasmic protein [Rhizobium sp.
CF122]
Length = 366
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 78/167 (46%), Gaps = 34/167 (20%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDP-----WWPELAGR-----ISM 277
DP G +A Y WGT IGY K K L P D K+P + P++A + I +
Sbjct: 121 DP-GNEYAVDYMWGTNGIGYNKKKLA-EILGP--DAKEPGLEAIFDPKVAEKFKDCGIYV 176
Query: 278 VNSPREVIVAG----------GKIAVQQNLALLANQVR----LFDSTHYLKAFGIGDVWV 323
+++P++V+ + K A Q L +VR F S+ Y+ A GD+ +
Sbjct: 177 LDAPKDVMPSALTYIGLDPNSSKPADLQKAGELLEKVRPFVRKFHSSEYINALANGDICI 236
Query: 324 AVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
A G+S D+ A R + + +P GA +W D+ AIPA ++
Sbjct: 237 AFGYSGDIFQAANRATEAKNGVEIGYSIPSQGAQMWFDMMAIPADAK 283
>gi|422654041|ref|ZP_16716794.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas syringae pv. actinidiae str. M302091]
gi|330967077|gb|EGH67337.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas syringae pv. actinidiae str. M302091]
Length = 364
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 72/164 (43%), Gaps = 29/164 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN-HNLAPIEDWKDPWWPELAGRIS---------- 276
DP G +A PY WGT IGY K + + I+ W + PE ++S
Sbjct: 120 DP-GNQYAVPYLWGTNGIGYNVDKVKAVLGVDKIDSWAVLFEPENIKKLSSCGVAFLDSA 178
Query: 277 ------MVN----SPREVIVAGGKIAVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVG 326
M+N SP A K A + LA+ V F S+ Y+ GD+ VA G
Sbjct: 179 DEMLPAMLNYLGLSPNSTNEADYKKAEAKLLAIRP-HVTYFHSSKYITDLANGDICVAAG 237
Query: 327 WSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIPAASR 364
+S DV A R +A +PK G +LW D+ AIPA S+
Sbjct: 238 FSGDVFQAKARAEEAGKGVKLAYSIPKEGGNLWFDMLAIPADSK 281
>gi|448241410|ref|YP_007405463.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Serratia marcescens WW4]
gi|445211774|gb|AGE17444.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Serratia marcescens WW4]
Length = 369
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 69/159 (43%), Gaps = 28/159 (17%)
Query: 234 WAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNSPREVIV 286
+ PY T IGY K + AP++ W PE + +S +++P EV
Sbjct: 128 YGIPYLMVTTGIGYNVDKVKAALGKDAPVDSWDLILKPENLEKLKSCGVSFLDAPSEVYA 187
Query: 287 --------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAVGWSSDV 331
A +L L L +R F S+ Y+ GD+ VA+GWS DV
Sbjct: 188 TVLHYLGKDPNSTNAADYTGAANDLLLKLRPNIRYFHSSQYINDLANGDICVAIGWSGDV 247
Query: 332 LPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
+ A R NVA +PK GA + D++A+PA ++
Sbjct: 248 MQAANRAKEAKNGVNVAYAIPKEGALTYFDMFAMPADAK 286
>gi|156934649|ref|YP_001438565.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Cronobacter sakazakii ATCC BAA-894]
gi|156532903|gb|ABU77729.1| hypothetical protein ESA_02483 [Cronobacter sakazakii ATCC BAA-894]
Length = 393
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 78/185 (42%), Gaps = 31/185 (16%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQNH--NLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP K +A PY W T IGY K + AP+ W PE + +S +++
Sbjct: 147 DPDNK-YAMPYLWATTGIGYNVDKVKAALGTDAPLNSWDLVLKPENLEKLKSCGVSFLDA 205
Query: 281 PREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAV 325
P E+ A +L L L +R F S+ Y+ GD+ VA+
Sbjct: 206 PEEIFATVLNYLGKDPNSSKADDYSGAATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 265
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIP--AASRLETKQIGGQVRGP 377
GW+ DV A R N++ +PK GA + D++A+P A ++ E Q + P
Sbjct: 266 GWAGDVWQAANRAKEAKNGVNISYTIPKEGALAFFDVFAMPADAKNKDEAYQFLNYLMRP 325
Query: 378 SPLIH 382
+ H
Sbjct: 326 DVMAH 330
>gi|13475456|ref|NP_107020.1| polyamine ABC transporter substrate-binding protein [Mesorhizobium
loti MAFF303099]
gi|14026208|dbj|BAB52806.1| ABC transporter, polyamine transport protein, periplasmic protein
[Mesorhizobium loti MAFF303099]
Length = 365
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 81/184 (44%), Gaps = 29/184 (15%)
Query: 204 DQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIGYKKSKFQNH-NLAPIED 262
D+ +S+ W V S + DP G ++ Y WGT+ IGY K + I+
Sbjct: 99 DKSKLPNISNMWDVI--SERTAKYDP-GNEYSVNYMWGTVGIGYNVKKVKAALGTDKIDS 155
Query: 263 WKDPWWPELAGR-----ISMVNSPREVIVAGGKIA--------------VQQNLALLANQ 303
W + PE + + +++SP ++I A K ++ L +
Sbjct: 156 WDVFFNPESLAKLKDCGVYVLDSPADIIPAALKYVGLDPNSTSPDDIAKAEEALMKVRPF 215
Query: 304 VRLFDSTHYLKAFGIGDVWVAVGWSSDVLPA------VKRMSNVAVVVPKSGASLWADLW 357
+R F S+ Y+ A GD+ +A+G+S DV A K+ + VPK GA +W D
Sbjct: 216 IRKFHSSEYINALANGDICLAIGFSGDVFQARNRAQEAKQGVEIGYSVPKEGAQIWFDQM 275
Query: 358 AIPA 361
AIPA
Sbjct: 276 AIPA 279
>gi|404403552|ref|ZP_10995136.1| putrescine ABC transporter periplasmic protein [Pseudomonas
fuscovaginae UPB0736]
Length = 364
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 81/190 (42%), Gaps = 41/190 (21%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN-HNLAPIEDWKDPWWPELAGRIS---------- 276
DP G +A PY WGT IGY K + + I+ W + PE ++S
Sbjct: 120 DP-GNQYAVPYLWGTNGIGYNVEKVKAVLGVDKIDSWAMLFEPENIKKLSSCGVAFLDSA 178
Query: 277 ----------MVNSPREVIVAGGKIAVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVG 326
M SP K+A ++ L + V F+S+ Y+ G++ VA G
Sbjct: 179 DEMLPAVLNYMGLSPNSTNEKDYKLA-EEKLLKVRPYVTYFNSSKYISDLANGEICVAAG 237
Query: 327 WSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASRLETKQIGGQVRGPSPL 380
+S D+ A KR ++A V+PK G +LW D+ AIP + G V+
Sbjct: 238 FSGDIFQAKKRAEEAKKGVDIAYVIPKEGGNLWFDMLAIP--------KDAGNVKEA--- 286
Query: 381 IHQWIEFCLQ 390
H +I + LQ
Sbjct: 287 -HAFINYLLQ 295
>gi|336312486|ref|ZP_08567435.1| putrescine ABC transporter putrescine-binding protein PotF
[Shewanella sp. HN-41]
gi|335863992|gb|EGM69110.1| putrescine ABC transporter putrescine-binding protein PotF
[Shewanella sp. HN-41]
Length = 366
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 73/161 (45%), Gaps = 28/161 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYK--KSKFQNHNLAPIEDWKDPWWPELAGRIS-----MVNS 280
DP G +A PY WGT IGY K K AP + + P+ A +IS M++S
Sbjct: 121 DP-GNQYAVPYLWGTNGIGYNIDKVKAAVGEDAPFNSMELIFNPKYAEKISKCGFAMLDS 179
Query: 281 -----PREVIVAG-----GKIAVQQNLALLANQVR----LFDSTHYLKAFGIGDVWVAVG 326
P+ +I G K + L ++R F S+ Y+ GD+ VA G
Sbjct: 180 ADDMVPQAMIYLGLDPNSTKAEDYEKAGELLEKIRPYVTYFHSSRYISDLANGDICVAFG 239
Query: 327 WSSDVLPAVKRM------SNVAVVVPKSGASLWADLWAIPA 361
+S DV A R + + +PK GA+LW D+ AIPA
Sbjct: 240 FSGDVFQAAARADEAGNGNKIGYSIPKEGANLWFDMLAIPA 280
>gi|260854146|ref|YP_003228037.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
coli O26:H11 str. 11368]
gi|415785124|ref|ZP_11492761.1| putrescine-binding periplasmic protein [Escherichia coli EPECa14]
gi|417295212|ref|ZP_12082468.1| putrescine-binding periplasmic protein [Escherichia coli 900105
(10e)]
gi|419208005|ref|ZP_13751128.1| potF [Escherichia coli DEC8C]
gi|419214551|ref|ZP_13757573.1| potF [Escherichia coli DEC8D]
gi|419220151|ref|ZP_13763103.1| potF [Escherichia coli DEC8E]
gi|419225642|ref|ZP_13768525.1| potF [Escherichia coli DEC9A]
gi|419231629|ref|ZP_13774417.1| potF [Escherichia coli DEC9B]
gi|419236828|ref|ZP_13779571.1| potF [Escherichia coli DEC9C]
gi|419242358|ref|ZP_13785005.1| potF [Escherichia coli DEC9D]
gi|419247875|ref|ZP_13790482.1| potF [Escherichia coli DEC9E]
gi|419253613|ref|ZP_13796152.1| potF [Escherichia coli DEC10A]
gi|419259675|ref|ZP_13802119.1| potF [Escherichia coli DEC10B]
gi|419265753|ref|ZP_13808134.1| potF [Escherichia coli DEC10C]
gi|419271357|ref|ZP_13813681.1| potF [Escherichia coli DEC10D]
gi|419282843|ref|ZP_13825054.1| potF [Escherichia coli DEC10F]
gi|419874556|ref|ZP_14396479.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O111:H11 str. CVM9534]
gi|419885475|ref|ZP_14406218.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O111:H11 str. CVM9545]
gi|419902683|ref|ZP_14421875.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O26:H11 str. CVM9942]
gi|419909554|ref|ZP_14428111.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
coli O26:H11 str. CVM10026]
gi|420105546|ref|ZP_14616016.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O111:H11 str. CVM9455]
gi|420111561|ref|ZP_14621389.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O111:H11 str. CVM9553]
gi|420117654|ref|ZP_14627009.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O26:H11 str. CVM10021]
gi|420124077|ref|ZP_14632947.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O26:H11 str. CVM10030]
gi|420129649|ref|ZP_14638175.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O26:H11 str. CVM10224]
gi|420133082|ref|ZP_14641352.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O26:H11 str. CVM9952]
gi|424747221|ref|ZP_18175418.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O26:H11 str.
CFSAN001629]
gi|424755887|ref|ZP_18183731.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O111:H11 str.
CFSAN001630]
gi|425377764|ref|ZP_18762130.1| putrescine-binding periplasmic protein [Escherichia coli EC1865]
gi|257752795|dbj|BAI24297.1| putrescine transporter subunit PotF [Escherichia coli O26:H11 str.
11368]
gi|323155772|gb|EFZ41941.1| putrescine-binding periplasmic protein [Escherichia coli EPECa14]
gi|378061179|gb|EHW23365.1| potF [Escherichia coli DEC8C]
gi|378066804|gb|EHW28932.1| potF [Escherichia coli DEC8D]
gi|378071385|gb|EHW33455.1| potF [Escherichia coli DEC8E]
gi|378080011|gb|EHW41977.1| potF [Escherichia coli DEC9A]
gi|378081347|gb|EHW43302.1| potF [Escherichia coli DEC9B]
gi|378087691|gb|EHW49547.1| potF [Escherichia coli DEC9C]
gi|378093709|gb|EHW55513.1| potF [Escherichia coli DEC9D]
gi|378100040|gb|EHW61737.1| potF [Escherichia coli DEC9E]
gi|378105153|gb|EHW66800.1| potF [Escherichia coli DEC10A]
gi|378114455|gb|EHW76011.1| potF [Escherichia coli DEC10B]
gi|378117332|gb|EHW78848.1| potF [Escherichia coli DEC10C]
gi|378120888|gb|EHW82350.1| potF [Escherichia coli DEC10D]
gi|378138045|gb|EHW99306.1| potF [Escherichia coli DEC10F]
gi|386261575|gb|EIJ17040.1| putrescine-binding periplasmic protein [Escherichia coli 900105
(10e)]
gi|388349802|gb|EIL15254.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O111:H11 str. CVM9545]
gi|388350747|gb|EIL16075.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O111:H11 str. CVM9534]
gi|388372924|gb|EIL36301.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
coli O26:H11 str. CVM10026]
gi|388373469|gb|EIL36739.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O26:H11 str. CVM9942]
gi|394381956|gb|EJE59609.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O26:H11 str. CVM10224]
gi|394395831|gb|EJE72224.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O111:H11 str. CVM9455]
gi|394398150|gb|EJE74350.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O111:H11 str. CVM9553]
gi|394401884|gb|EJE77653.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O26:H11 str. CVM10021]
gi|394415718|gb|EJE89562.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O26:H11 str. CVM10030]
gi|394426734|gb|EJE99527.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O26:H11 str. CVM9952]
gi|408308734|gb|EKJ25967.1| putrescine-binding periplasmic protein [Escherichia coli EC1865]
gi|421946651|gb|EKU03767.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O26:H11 str.
CFSAN001629]
gi|421949939|gb|EKU06844.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O111:H11 str.
CFSAN001630]
Length = 370
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 73/165 (44%), Gaps = 29/165 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP K +A PY W T IGY K + AP++ W PE + +S +++
Sbjct: 124 DPDNK-FAMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDA 182
Query: 281 PREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAV 325
P EV A +L L L +R F S+ Y+ GD+ VA+
Sbjct: 183 PEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 242
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 243 GWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|157369888|ref|YP_001477877.1| putrescine ABC transporter periplasmic-binding protein [Serratia
proteamaculans 568]
gi|157321652|gb|ABV40749.1| extracellular solute-binding protein family 1 [Serratia
proteamaculans 568]
Length = 369
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 69/159 (43%), Gaps = 28/159 (17%)
Query: 234 WAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNSPREVIV 286
+ PY T IGY K + AP++ W PE + +S +++P EV
Sbjct: 128 YGIPYLMVTTGIGYNVDKVKAVLGKDAPVDSWDLILKPENLEKLKSCGVSFLDAPSEVYA 187
Query: 287 --------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAVGWSSDV 331
A +L L L +R F S+ Y+ GD+ VA+GWS DV
Sbjct: 188 TVLHYLGKDPNSTNAADYTGAANDLLLKLRPNIRYFHSSQYINDLANGDICVAIGWSGDV 247
Query: 332 LPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
+ A R NVA +PK GA + D++A+PA ++
Sbjct: 248 MQAANRAKEAKNGVNVAYAIPKEGALTYFDMFAMPADAK 286
>gi|453062799|gb|EMF03787.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily, partial [Serratia marcescens VGH107]
Length = 368
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 69/159 (43%), Gaps = 28/159 (17%)
Query: 234 WAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNSPREVIV 286
+ PY T IGY K + AP++ W PE + +S +++P EV
Sbjct: 128 YGIPYLMVTTGIGYNVDKVKAALGKDAPVDSWDLILKPENLEKLKSCGVSFLDAPSEVYA 187
Query: 287 --------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAVGWSSDV 331
A +L L L +R F S+ Y+ GD+ VA+GWS DV
Sbjct: 188 TVLHYLGKDPNSTNAADYTGAANDLLLKLRPNIRYFHSSQYINDLANGDICVAIGWSGDV 247
Query: 332 LPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
+ A R NVA +PK GA + D++A+PA ++
Sbjct: 248 MQAANRAKEAKNGVNVAYAIPKEGALTYFDMFAMPADAK 286
>gi|429114895|ref|ZP_19175813.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Cronobacter sakazakii 701]
gi|426318024|emb|CCK01926.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Cronobacter sakazakii 701]
Length = 370
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 72/165 (43%), Gaps = 29/165 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP K +A PY W T IGY K + AP+ W PE + +S +++
Sbjct: 124 DPDNK-YAMPYLWATTGIGYNVDKVKAALGTDAPLNSWDLVLKPENLKKLKSCGVSFLDA 182
Query: 281 PREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAV 325
P E+ A +L L L +R F S+ Y+ GD+ VA+
Sbjct: 183 PEEIFATVLNYLGKDPNSSKADDYSGAATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 242
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
GW+ DV A R N++ +PK GA + D++A+PA ++
Sbjct: 243 GWAGDVWQAANRAKEAKNGVNISYTIPKEGALAFFDVFAMPADAK 287
>gi|417665994|ref|ZP_12315556.1| putrescine-binding periplasmic protein [Escherichia coli STEC_O31]
gi|397786545|gb|EJK97381.1| putrescine-binding periplasmic protein [Escherichia coli STEC_O31]
Length = 370
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 73/165 (44%), Gaps = 29/165 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP K +A PY W T IGY K + AP++ W PE + +S +++
Sbjct: 124 DPDNK-FAMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDA 182
Query: 281 PREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAV 325
P EV A +L L L +R F S+ Y+ GD+ VA+
Sbjct: 183 PEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 242
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 243 GWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|418825311|ref|ZP_13380614.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 22462]
gi|392816284|gb|EJA72213.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 22462]
Length = 325
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 72/165 (43%), Gaps = 29/165 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP K +A PY W T IGY K + + AP+ W PE + +S +++
Sbjct: 79 DPDNK-YAMPYMWATTGIGYNVDKVKAVLGDDAPVNSWDLVLKPENLEKLKSCGVSFLDA 137
Query: 281 PREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAV 325
P E+ A +L L L +R F S+ Y+ GD VA+
Sbjct: 138 PEEIFATVLNYLDKDPNSSKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDTCVAI 197
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
GW+ DV A R N++ +PK GA + D++A+PA ++
Sbjct: 198 GWAGDVWQAANRAKEAKNGVNISFSIPKEGAMAFFDVFAMPADAK 242
>gi|386638205|ref|YP_006105003.1| putrescine-binding periplasmic protein [Escherichia coli ABU 83972]
gi|432410855|ref|ZP_19653536.1| putrescine-binding periplasmic protein [Escherichia coli KTE39]
gi|432430903|ref|ZP_19673346.1| putrescine-binding periplasmic protein [Escherichia coli KTE187]
gi|432435431|ref|ZP_19677830.1| putrescine-binding periplasmic protein [Escherichia coli KTE188]
gi|432455718|ref|ZP_19697917.1| putrescine-binding periplasmic protein [Escherichia coli KTE201]
gi|432494656|ref|ZP_19736472.1| putrescine-binding periplasmic protein [Escherichia coli KTE214]
gi|432503495|ref|ZP_19745230.1| putrescine-binding periplasmic protein [Escherichia coli KTE220]
gi|432522940|ref|ZP_19760077.1| putrescine-binding periplasmic protein [Escherichia coli KTE230]
gi|432567686|ref|ZP_19804211.1| putrescine-binding periplasmic protein [Escherichia coli KTE53]
gi|432591906|ref|ZP_19828233.1| putrescine-binding periplasmic protein [Escherichia coli KTE60]
gi|432606673|ref|ZP_19842866.1| putrescine-binding periplasmic protein [Escherichia coli KTE67]
gi|432650315|ref|ZP_19886075.1| putrescine-binding periplasmic protein [Escherichia coli KTE87]
gi|432782739|ref|ZP_20016923.1| putrescine-binding periplasmic protein [Escherichia coli KTE63]
gi|432843158|ref|ZP_20076493.1| putrescine-binding periplasmic protein [Escherichia coli KTE141]
gi|432994584|ref|ZP_20183198.1| putrescine-binding periplasmic protein [Escherichia coli KTE218]
gi|432999002|ref|ZP_20187540.1| putrescine-binding periplasmic protein [Escherichia coli KTE223]
gi|433057146|ref|ZP_20244229.1| putrescine-binding periplasmic protein [Escherichia coli KTE124]
gi|433114738|ref|ZP_20300552.1| putrescine-binding periplasmic protein [Escherichia coli KTE153]
gi|433124397|ref|ZP_20309984.1| putrescine-binding periplasmic protein [Escherichia coli KTE160]
gi|433138457|ref|ZP_20323741.1| putrescine-binding periplasmic protein [Escherichia coli KTE167]
gi|433148244|ref|ZP_20333308.1| putrescine-binding periplasmic protein [Escherichia coli KTE174]
gi|433206972|ref|ZP_20390667.1| putrescine-binding periplasmic protein [Escherichia coli KTE97]
gi|433211720|ref|ZP_20395333.1| putrescine-binding periplasmic protein [Escherichia coli KTE99]
gi|442606405|ref|ZP_21021205.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Escherichia coli Nissle 1917]
gi|307552697|gb|ADN45472.1| putrescine-binding periplasmic protein precursor [Escherichia coli
ABU 83972]
gi|430937353|gb|ELC57608.1| putrescine-binding periplasmic protein [Escherichia coli KTE39]
gi|430955343|gb|ELC74126.1| putrescine-binding periplasmic protein [Escherichia coli KTE187]
gi|430965759|gb|ELC83168.1| putrescine-binding periplasmic protein [Escherichia coli KTE188]
gi|430984445|gb|ELD01068.1| putrescine-binding periplasmic protein [Escherichia coli KTE201]
gi|431027261|gb|ELD40324.1| putrescine-binding periplasmic protein [Escherichia coli KTE214]
gi|431041541|gb|ELD52041.1| putrescine-binding periplasmic protein [Escherichia coli KTE220]
gi|431054250|gb|ELD63831.1| putrescine-binding periplasmic protein [Escherichia coli KTE230]
gi|431102634|gb|ELE07448.1| putrescine-binding periplasmic protein [Escherichia coli KTE53]
gi|431131822|gb|ELE33838.1| putrescine-binding periplasmic protein [Escherichia coli KTE60]
gi|431140125|gb|ELE41902.1| putrescine-binding periplasmic protein [Escherichia coli KTE67]
gi|431192871|gb|ELE92215.1| putrescine-binding periplasmic protein [Escherichia coli KTE87]
gi|431331138|gb|ELG18401.1| putrescine-binding periplasmic protein [Escherichia coli KTE63]
gi|431396929|gb|ELG80391.1| putrescine-binding periplasmic protein [Escherichia coli KTE141]
gi|431508797|gb|ELH87068.1| putrescine-binding periplasmic protein [Escherichia coli KTE218]
gi|431513342|gb|ELH91425.1| putrescine-binding periplasmic protein [Escherichia coli KTE223]
gi|431573714|gb|ELI46511.1| putrescine-binding periplasmic protein [Escherichia coli KTE124]
gi|431636448|gb|ELJ04579.1| putrescine-binding periplasmic protein [Escherichia coli KTE153]
gi|431649204|gb|ELJ16563.1| putrescine-binding periplasmic protein [Escherichia coli KTE160]
gi|431664635|gb|ELJ31369.1| putrescine-binding periplasmic protein [Escherichia coli KTE167]
gi|431676357|gb|ELJ42477.1| putrescine-binding periplasmic protein [Escherichia coli KTE174]
gi|431732188|gb|ELJ95644.1| putrescine-binding periplasmic protein [Escherichia coli KTE97]
gi|431735918|gb|ELJ99262.1| putrescine-binding periplasmic protein [Escherichia coli KTE99]
gi|441712481|emb|CCQ07182.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Escherichia coli Nissle 1917]
Length = 370
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 73/165 (44%), Gaps = 29/165 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP K +A PY W T IGY K + AP++ W PE + +S +++
Sbjct: 124 DPDNK-FAMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDA 182
Query: 281 PREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAV 325
P EV A +L L L +R F S+ Y+ GD+ VA+
Sbjct: 183 PEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 242
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 243 GWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|110641056|ref|YP_668786.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
coli 536]
gi|191172122|ref|ZP_03033666.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli F11]
gi|191173739|ref|ZP_03035262.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli F11]
gi|215485985|ref|YP_002328416.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
coli O127:H6 str. E2348/69]
gi|218557758|ref|YP_002390671.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
coli S88]
gi|218688637|ref|YP_002396849.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
coli ED1a]
gi|306812697|ref|ZP_07446890.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli NC101]
gi|312969079|ref|ZP_07783286.1| putrescine-binding periplasmic protein [Escherichia coli 2362-75]
gi|331656926|ref|ZP_08357888.1| putrescine-binding periplasmic protein [Escherichia coli TA206]
gi|386598572|ref|YP_006100078.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Escherichia coli IHE3034]
gi|386605253|ref|YP_006111553.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
coli UM146]
gi|387828832|ref|YP_003348769.1| putrescine ABC transporter substrate binding component [Escherichia
coli SE15]
gi|416335114|ref|ZP_11671825.1| Putrescine ABC transporter putrescine-binding protein PotF
[Escherichia coli WV_060327]
gi|417083350|ref|ZP_11951445.1| putrescine ABC transporter periplasmic substrate-binding protein
[Escherichia coli cloneA_i1]
gi|417288918|ref|ZP_12076203.1| putrescine-binding periplasmic protein [Escherichia coli TW07793]
gi|417661418|ref|ZP_12310999.1| putrescine ABC transporter putrescine-binding protein PotF
[Escherichia coli AA86]
gi|417754753|ref|ZP_12402844.1| potF [Escherichia coli DEC2B]
gi|418996071|ref|ZP_13543678.1| potF [Escherichia coli DEC1A]
gi|419001120|ref|ZP_13548671.1| potF [Escherichia coli DEC1B]
gi|419006610|ref|ZP_13554063.1| potF [Escherichia coli DEC1C]
gi|419012454|ref|ZP_13559818.1| putrescine-binding periplasmic protein [Escherichia coli DEC1D]
gi|419017452|ref|ZP_13564771.1| potF [Escherichia coli DEC1E]
gi|419023044|ref|ZP_13570285.1| putrescine-binding periplasmic protein [Escherichia coli DEC2A]
gi|419027912|ref|ZP_13575104.1| potF [Escherichia coli DEC2C]
gi|419033667|ref|ZP_13580763.1| potF [Escherichia coli DEC2D]
gi|419038720|ref|ZP_13585773.1| potF [Escherichia coli DEC2E]
gi|419699706|ref|ZP_14227318.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli SCI-07]
gi|419911703|ref|ZP_14430172.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli KD1]
gi|422748099|ref|ZP_16802012.1| extracellular solute-binding protein [Escherichia coli H252]
gi|422753460|ref|ZP_16807287.1| extracellular solute-binding protein [Escherichia coli H263]
gi|422839317|ref|ZP_16887289.1| putrescine-binding periplasmic protein [Escherichia coli H397]
gi|425299119|ref|ZP_18689161.1| putrescine-binding periplasmic protein [Escherichia coli 07798]
gi|432357183|ref|ZP_19600427.1| putrescine-binding periplasmic protein [Escherichia coli KTE4]
gi|432361610|ref|ZP_19604794.1| putrescine-binding periplasmic protein [Escherichia coli KTE5]
gi|432380477|ref|ZP_19623432.1| putrescine-binding periplasmic protein [Escherichia coli KTE15]
gi|432386304|ref|ZP_19629200.1| putrescine-binding periplasmic protein [Escherichia coli KTE16]
gi|432396738|ref|ZP_19639523.1| putrescine-binding periplasmic protein [Escherichia coli KTE25]
gi|432405670|ref|ZP_19648390.1| putrescine-binding periplasmic protein [Escherichia coli KTE28]
gi|432440215|ref|ZP_19682567.1| putrescine-binding periplasmic protein [Escherichia coli KTE189]
gi|432445345|ref|ZP_19687651.1| putrescine-binding periplasmic protein [Escherichia coli KTE191]
gi|432470222|ref|ZP_19712274.1| putrescine-binding periplasmic protein [Escherichia coli KTE206]
gi|432499066|ref|ZP_19740842.1| putrescine-binding periplasmic protein [Escherichia coli KTE216]
gi|432513092|ref|ZP_19750327.1| putrescine-binding periplasmic protein [Escherichia coli KTE224]
gi|432572832|ref|ZP_19809322.1| putrescine-binding periplasmic protein [Escherichia coli KTE55]
gi|432587092|ref|ZP_19823462.1| putrescine-binding periplasmic protein [Escherichia coli KTE58]
gi|432596733|ref|ZP_19833014.1| putrescine-binding periplasmic protein [Escherichia coli KTE62]
gi|432610523|ref|ZP_19846694.1| putrescine-binding periplasmic protein [Escherichia coli KTE72]
gi|432645281|ref|ZP_19881080.1| putrescine-binding periplasmic protein [Escherichia coli KTE86]
gi|432655119|ref|ZP_19890831.1| putrescine-binding periplasmic protein [Escherichia coli KTE93]
gi|432693606|ref|ZP_19928817.1| putrescine-binding periplasmic protein [Escherichia coli KTE162]
gi|432698204|ref|ZP_19933370.1| putrescine-binding periplasmic protein [Escherichia coli KTE169]
gi|432712512|ref|ZP_19947561.1| putrescine-binding periplasmic protein [Escherichia coli KTE8]
gi|432722365|ref|ZP_19957288.1| putrescine-binding periplasmic protein [Escherichia coli KTE17]
gi|432726953|ref|ZP_19961834.1| putrescine-binding periplasmic protein [Escherichia coli KTE18]
gi|432731563|ref|ZP_19966399.1| putrescine-binding periplasmic protein [Escherichia coli KTE45]
gi|432740639|ref|ZP_19975360.1| putrescine-binding periplasmic protein [Escherichia coli KTE23]
gi|432744824|ref|ZP_19979523.1| putrescine-binding periplasmic protein [Escherichia coli KTE43]
gi|432753591|ref|ZP_19988157.1| putrescine-binding periplasmic protein [Escherichia coli KTE22]
gi|432758641|ref|ZP_19993141.1| putrescine-binding periplasmic protein [Escherichia coli KTE46]
gi|432777731|ref|ZP_20011981.1| putrescine-binding periplasmic protein [Escherichia coli KTE59]
gi|432786519|ref|ZP_20020684.1| putrescine-binding periplasmic protein [Escherichia coli KTE65]
gi|432820111|ref|ZP_20053824.1| putrescine-binding periplasmic protein [Escherichia coli KTE118]
gi|432826327|ref|ZP_20059982.1| putrescine-binding periplasmic protein [Escherichia coli KTE123]
gi|432893590|ref|ZP_20105602.1| putrescine-binding periplasmic protein [Escherichia coli KTE165]
gi|432897785|ref|ZP_20108616.1| putrescine-binding periplasmic protein [Escherichia coli KTE192]
gi|432903437|ref|ZP_20112903.1| putrescine-binding periplasmic protein [Escherichia coli KTE194]
gi|432918076|ref|ZP_20122481.1| putrescine-binding periplasmic protein [Escherichia coli KTE173]
gi|432925366|ref|ZP_20127395.1| putrescine-binding periplasmic protein [Escherichia coli KTE175]
gi|432942903|ref|ZP_20140057.1| putrescine-binding periplasmic protein [Escherichia coli KTE183]
gi|432971009|ref|ZP_20159887.1| putrescine-binding periplasmic protein [Escherichia coli KTE207]
gi|432980327|ref|ZP_20169105.1| putrescine-binding periplasmic protein [Escherichia coli KTE211]
gi|432984481|ref|ZP_20173218.1| putrescine-binding periplasmic protein [Escherichia coli KTE215]
gi|432989952|ref|ZP_20178618.1| putrescine-binding periplasmic protein [Escherichia coli KTE217]
gi|433004319|ref|ZP_20192757.1| putrescine-binding periplasmic protein [Escherichia coli KTE227]
gi|433011574|ref|ZP_20199978.1| putrescine-binding periplasmic protein [Escherichia coli KTE229]
gi|433013071|ref|ZP_20201446.1| putrescine-binding periplasmic protein [Escherichia coli KTE104]
gi|433022713|ref|ZP_20210725.1| putrescine-binding periplasmic protein [Escherichia coli KTE106]
gi|433027879|ref|ZP_20215751.1| putrescine-binding periplasmic protein [Escherichia coli KTE109]
gi|433037892|ref|ZP_20225504.1| putrescine-binding periplasmic protein [Escherichia coli KTE113]
gi|433077013|ref|ZP_20263575.1| putrescine-binding periplasmic protein [Escherichia coli KTE131]
gi|433081779|ref|ZP_20268253.1| putrescine-binding periplasmic protein [Escherichia coli KTE133]
gi|433095749|ref|ZP_20281960.1| putrescine-binding periplasmic protein [Escherichia coli KTE139]
gi|433100363|ref|ZP_20286470.1| putrescine-binding periplasmic protein [Escherichia coli KTE145]
gi|433104959|ref|ZP_20290977.1| putrescine-binding periplasmic protein [Escherichia coli KTE148]
gi|433110174|ref|ZP_20296048.1| putrescine-binding periplasmic protein [Escherichia coli KTE150]
gi|433143474|ref|ZP_20328640.1| putrescine-binding periplasmic protein [Escherichia coli KTE168]
gi|433152944|ref|ZP_20337910.1| putrescine-binding periplasmic protein [Escherichia coli KTE176]
gi|433162689|ref|ZP_20347448.1| putrescine-binding periplasmic protein [Escherichia coli KTE179]
gi|433167698|ref|ZP_20352364.1| putrescine-binding periplasmic protein [Escherichia coli KTE180]
gi|433187638|ref|ZP_20371755.1| putrescine-binding periplasmic protein [Escherichia coli KTE88]
gi|433197462|ref|ZP_20381383.1| putrescine-binding periplasmic protein [Escherichia coli KTE94]
gi|433322318|ref|ZP_20399788.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli J96]
gi|110342648|gb|ABG68885.1| putrescine-binding periplasmic protein precursor [Escherichia coli
536]
gi|190905989|gb|EDV65605.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli F11]
gi|190907649|gb|EDV67244.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli F11]
gi|215264057|emb|CAS08399.1| putrescine transporter subunit PotF: periplasmic-binding component
of ABC superfamily [Escherichia coli O127:H6 str.
E2348/69]
gi|218364527|emb|CAR02209.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli S88]
gi|218426201|emb|CAR07023.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli ED1a]
gi|281177989|dbj|BAI54319.1| putrescine ABC transporter substrate binding component [Escherichia
coli SE15]
gi|294491889|gb|ADE90645.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli IHE3034]
gi|305853460|gb|EFM53899.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli NC101]
gi|307627737|gb|ADN72041.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli UM146]
gi|312286481|gb|EFR14394.1| putrescine-binding periplasmic protein [Escherichia coli 2362-75]
gi|320196651|gb|EFW71274.1| Putrescine ABC transporter putrescine-binding protein PotF
[Escherichia coli WV_060327]
gi|323953442|gb|EGB49308.1| extracellular solute-binding protein [Escherichia coli H252]
gi|323958143|gb|EGB53852.1| extracellular solute-binding protein [Escherichia coli H263]
gi|330910636|gb|EGH39146.1| putrescine ABC transporter putrescine-binding protein PotF
[Escherichia coli AA86]
gi|331055174|gb|EGI27183.1| putrescine-binding periplasmic protein [Escherichia coli TA206]
gi|355352766|gb|EHG01940.1| putrescine ABC transporter periplasmic substrate-binding protein
[Escherichia coli cloneA_i1]
gi|371609849|gb|EHN98382.1| putrescine-binding periplasmic protein [Escherichia coli H397]
gi|377848061|gb|EHU13058.1| potF [Escherichia coli DEC1A]
gi|377849686|gb|EHU14655.1| potF [Escherichia coli DEC1C]
gi|377852468|gb|EHU17387.1| potF [Escherichia coli DEC1B]
gi|377862077|gb|EHU26891.1| putrescine-binding periplasmic protein [Escherichia coli DEC1D]
gi|377865908|gb|EHU30698.1| potF [Escherichia coli DEC1E]
gi|377868054|gb|EHU32803.1| putrescine-binding periplasmic protein [Escherichia coli DEC2A]
gi|377878196|gb|EHU42784.1| potF [Escherichia coli DEC2B]
gi|377882844|gb|EHU47375.1| potF [Escherichia coli DEC2D]
gi|377884039|gb|EHU48556.1| potF [Escherichia coli DEC2C]
gi|377897181|gb|EHU61564.1| potF [Escherichia coli DEC2E]
gi|380348812|gb|EIA37088.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli SCI-07]
gi|386247710|gb|EII93883.1| putrescine-binding periplasmic protein [Escherichia coli TW07793]
gi|388393013|gb|EIL54407.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli KD1]
gi|408221062|gb|EKI45045.1| putrescine-binding periplasmic protein [Escherichia coli 07798]
gi|430879049|gb|ELC02406.1| putrescine-binding periplasmic protein [Escherichia coli KTE4]
gi|430889500|gb|ELC12161.1| putrescine-binding periplasmic protein [Escherichia coli KTE5]
gi|430909225|gb|ELC30610.1| putrescine-binding periplasmic protein [Escherichia coli KTE16]
gi|430910792|gb|ELC32092.1| putrescine-binding periplasmic protein [Escherichia coli KTE15]
gi|430917058|gb|ELC38106.1| putrescine-binding periplasmic protein [Escherichia coli KTE25]
gi|430931824|gb|ELC52258.1| putrescine-binding periplasmic protein [Escherichia coli KTE28]
gi|430968941|gb|ELC86109.1| putrescine-binding periplasmic protein [Escherichia coli KTE189]
gi|430975187|gb|ELC92089.1| putrescine-binding periplasmic protein [Escherichia coli KTE191]
gi|430999400|gb|ELD15482.1| putrescine-binding periplasmic protein [Escherichia coli KTE206]
gi|431031737|gb|ELD44475.1| putrescine-binding periplasmic protein [Escherichia coli KTE216]
gi|431044131|gb|ELD54411.1| putrescine-binding periplasmic protein [Escherichia coli KTE224]
gi|431110040|gb|ELE13967.1| putrescine-binding periplasmic protein [Escherichia coli KTE55]
gi|431123259|gb|ELE26001.1| putrescine-binding periplasmic protein [Escherichia coli KTE58]
gi|431132518|gb|ELE34517.1| putrescine-binding periplasmic protein [Escherichia coli KTE62]
gi|431150864|gb|ELE51906.1| putrescine-binding periplasmic protein [Escherichia coli KTE72]
gi|431182512|gb|ELE82329.1| putrescine-binding periplasmic protein [Escherichia coli KTE86]
gi|431194029|gb|ELE93299.1| putrescine-binding periplasmic protein [Escherichia coli KTE93]
gi|431236272|gb|ELF31485.1| putrescine-binding periplasmic protein [Escherichia coli KTE162]
gi|431246344|gb|ELF40610.1| putrescine-binding periplasmic protein [Escherichia coli KTE169]
gi|431258645|gb|ELF51408.1| putrescine-binding periplasmic protein [Escherichia coli KTE8]
gi|431267442|gb|ELF58959.1| putrescine-binding periplasmic protein [Escherichia coli KTE17]
gi|431274741|gb|ELF65786.1| putrescine-binding periplasmic protein [Escherichia coli KTE18]
gi|431277818|gb|ELF68822.1| putrescine-binding periplasmic protein [Escherichia coli KTE45]
gi|431285230|gb|ELF76066.1| putrescine-binding periplasmic protein [Escherichia coli KTE23]
gi|431294300|gb|ELF84480.1| putrescine-binding periplasmic protein [Escherichia coli KTE43]
gi|431304827|gb|ELF93351.1| putrescine-binding periplasmic protein [Escherichia coli KTE22]
gi|431310580|gb|ELF98761.1| putrescine-binding periplasmic protein [Escherichia coli KTE46]
gi|431329920|gb|ELG17205.1| putrescine-binding periplasmic protein [Escherichia coli KTE59]
gi|431341155|gb|ELG28169.1| putrescine-binding periplasmic protein [Escherichia coli KTE65]
gi|431370367|gb|ELG56168.1| putrescine-binding periplasmic protein [Escherichia coli KTE118]
gi|431374111|gb|ELG59706.1| putrescine-binding periplasmic protein [Escherichia coli KTE123]
gi|431424570|gb|ELH06666.1| putrescine-binding periplasmic protein [Escherichia coli KTE165]
gi|431428512|gb|ELH10453.1| putrescine-binding periplasmic protein [Escherichia coli KTE192]
gi|431435881|gb|ELH17489.1| putrescine-binding periplasmic protein [Escherichia coli KTE194]
gi|431446257|gb|ELH27006.1| putrescine-binding periplasmic protein [Escherichia coli KTE173]
gi|431448087|gb|ELH28805.1| putrescine-binding periplasmic protein [Escherichia coli KTE175]
gi|431452790|gb|ELH33201.1| putrescine-binding periplasmic protein [Escherichia coli KTE183]
gi|431486146|gb|ELH65803.1| putrescine-binding periplasmic protein [Escherichia coli KTE207]
gi|431493222|gb|ELH72816.1| putrescine-binding periplasmic protein [Escherichia coli KTE211]
gi|431496827|gb|ELH76405.1| putrescine-binding periplasmic protein [Escherichia coli KTE217]
gi|431505060|gb|ELH83683.1| putrescine-binding periplasmic protein [Escherichia coli KTE215]
gi|431517640|gb|ELH95162.1| putrescine-binding periplasmic protein [Escherichia coli KTE227]
gi|431518189|gb|ELH95709.1| putrescine-binding periplasmic protein [Escherichia coli KTE229]
gi|431534519|gb|ELI11001.1| putrescine-binding periplasmic protein [Escherichia coli KTE104]
gi|431539450|gb|ELI15201.1| putrescine-binding periplasmic protein [Escherichia coli KTE106]
gi|431545260|gb|ELI19920.1| putrescine-binding periplasmic protein [Escherichia coli KTE109]
gi|431554062|gb|ELI27944.1| putrescine-binding periplasmic protein [Escherichia coli KTE113]
gi|431600291|gb|ELI69963.1| putrescine-binding periplasmic protein [Escherichia coli KTE131]
gi|431605614|gb|ELI75003.1| putrescine-binding periplasmic protein [Escherichia coli KTE133]
gi|431619007|gb|ELI87935.1| putrescine-binding periplasmic protein [Escherichia coli KTE139]
gi|431621820|gb|ELI90610.1| putrescine-binding periplasmic protein [Escherichia coli KTE145]
gi|431630810|gb|ELI99138.1| putrescine-binding periplasmic protein [Escherichia coli KTE150]
gi|431633715|gb|ELJ01978.1| putrescine-binding periplasmic protein [Escherichia coli KTE148]
gi|431665576|gb|ELJ32294.1| putrescine-binding periplasmic protein [Escherichia coli KTE168]
gi|431678037|gb|ELJ44049.1| putrescine-binding periplasmic protein [Escherichia coli KTE176]
gi|431691359|gb|ELJ56819.1| putrescine-binding periplasmic protein [Escherichia coli KTE179]
gi|431692960|gb|ELJ58381.1| putrescine-binding periplasmic protein [Escherichia coli KTE180]
gi|431708638|gb|ELJ73146.1| putrescine-binding periplasmic protein [Escherichia coli KTE88]
gi|431724536|gb|ELJ88453.1| putrescine-binding periplasmic protein [Escherichia coli KTE94]
gi|432349036|gb|ELL43477.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli J96]
Length = 370
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 73/165 (44%), Gaps = 29/165 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP K +A PY W T IGY K + AP++ W PE + +S +++
Sbjct: 124 DPDNK-FAMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDA 182
Query: 281 PREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAV 325
P EV A +L L L +R F S+ Y+ GD+ VA+
Sbjct: 183 PEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 242
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 243 GWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|30062336|ref|NP_836507.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Shigella flexneri 2a str. 2457T]
gi|56479743|ref|NP_706734.2| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Shigella flexneri 2a str. 301]
gi|415854716|ref|ZP_11530302.1| putrescine-binding periplasmic protein [Shigella flexneri 2a str.
2457T]
gi|417700887|ref|ZP_12350020.1| putrescine-binding periplasmic protein [Shigella flexneri K-218]
gi|417706478|ref|ZP_12355534.1| putrescine-binding periplasmic protein [Shigella flexneri VA-6]
gi|417716351|ref|ZP_12365280.1| putrescine-binding periplasmic protein [Shigella flexneri K-227]
gi|417721888|ref|ZP_12370729.1| putrescine-binding periplasmic protein [Shigella flexneri K-304]
gi|417727257|ref|ZP_12375998.1| putrescine-binding periplasmic protein [Shigella flexneri K-671]
gi|417732382|ref|ZP_12381051.1| putrescine-binding periplasmic protein [Shigella flexneri 2747-71]
gi|420319367|ref|ZP_14821220.1| putrescine-binding periplasmic protein [Shigella flexneri 2850-71]
gi|420340477|ref|ZP_14842001.1| putrescine-binding periplasmic protein [Shigella flexneri K-404]
gi|30040581|gb|AAP16313.1| periplasmic putrescine-binding protein; permease protein [Shigella
flexneri 2a str. 2457T]
gi|56383294|gb|AAN42441.2| periplasmic putrescine-binding protein; permease protein [Shigella
flexneri 2a str. 301]
gi|313650239|gb|EFS14651.1| putrescine-binding periplasmic protein [Shigella flexneri 2a str.
2457T]
gi|332760493|gb|EGJ90782.1| putrescine-binding periplasmic protein [Shigella flexneri 2747-71]
gi|332763068|gb|EGJ93313.1| putrescine-binding periplasmic protein [Shigella flexneri K-671]
gi|333006656|gb|EGK26155.1| putrescine-binding periplasmic protein [Shigella flexneri VA-6]
gi|333006922|gb|EGK26417.1| putrescine-binding periplasmic protein [Shigella flexneri K-218]
gi|333020148|gb|EGK39418.1| putrescine-binding periplasmic protein [Shigella flexneri K-227]
gi|333020972|gb|EGK40230.1| putrescine-binding periplasmic protein [Shigella flexneri K-304]
gi|391253555|gb|EIQ12728.1| putrescine-binding periplasmic protein [Shigella flexneri 2850-71]
gi|391273034|gb|EIQ31863.1| putrescine-binding periplasmic protein [Shigella flexneri K-404]
Length = 370
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 73/165 (44%), Gaps = 29/165 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP K +A PY W T IGY K + AP++ W PE + +S +++
Sbjct: 124 DPDNK-FAMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDA 182
Query: 281 PREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAV 325
P EV A +L L L +R F S+ Y+ GD+ VA+
Sbjct: 183 PEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 242
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 243 GWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|23100612|ref|NP_694079.1| spermidine:putrescine ABC transporter [Oceanobacillus iheyensis
HTE831]
gi|22778845|dbj|BAC15113.1| spermidine:putrescine ABC transporter spermidine:putrescine-binding
protein [Oceanobacillus iheyensis HTE831]
Length = 358
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 89/217 (41%), Gaps = 40/217 (18%)
Query: 227 IDPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAP----IEDWKDPWWPELAGRISMVNSPR 282
DP + ++ PY WGT+ I + N NL P + W D W P L +I +++ R
Sbjct: 126 FDPNNQ-YSIPYFWGTVGIIF------NTNLLPEGMELTGWHDLWDPALENQILLIDGAR 178
Query: 283 EVIVAG-GKIAVQQN-------------LALLANQVRLFDSTHYLKAFGIGDVWVAVGWS 328
E+I G + N L L VR + +A+GWS
Sbjct: 179 EIIGMGLNSLGYSLNDTNPEHLYQALEKLEELTPNVRAIVGDENKMLMANNEATIAIGWS 238
Query: 329 SDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGQVRGPSPLIHQWIEFC 388
D + + +VP+ G++LW D + IP +R I G HQ+I F
Sbjct: 239 GDAADIMGENEAIDYLVPEEGSNLWFDNFVIPKTAR----NIDGA--------HQFINFM 286
Query: 389 LQTARALPFKQEVIPGASPSALESTLVKLPEELLKGK 425
L A E + ++P+ + L +PEE+++ +
Sbjct: 287 LDAEIAAQ-NTEYVSYSTPN--KEALQFMPEEMVEDE 320
>gi|415836956|ref|ZP_11519206.1| putrescine-binding periplasmic protein [Escherichia coli RN587/1]
gi|417282938|ref|ZP_12070236.1| putrescine-binding periplasmic protein [Escherichia coli 3003]
gi|425276803|ref|ZP_18668129.1| putrescine-binding periplasmic protein [Escherichia coli ARS4.2123]
gi|323190676|gb|EFZ75945.1| putrescine-binding periplasmic protein [Escherichia coli RN587/1]
gi|386244143|gb|EII85875.1| putrescine-binding periplasmic protein [Escherichia coli 3003]
gi|408206064|gb|EKI30883.1| putrescine-binding periplasmic protein [Escherichia coli ARS4.2123]
Length = 370
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 73/165 (44%), Gaps = 29/165 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP K +A PY W T IGY K + AP++ W PE + +S +++
Sbjct: 124 DPDNK-FAMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDA 182
Query: 281 PREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAV 325
P EV A +L L L +R F S+ Y+ GD+ VA+
Sbjct: 183 PEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 242
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 243 GWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|301027634|ref|ZP_07190954.1| bacterial extracellular solute-binding protein [Escherichia coli MS
196-1]
gi|299879236|gb|EFI87447.1| bacterial extracellular solute-binding protein [Escherichia coli MS
196-1]
Length = 370
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 73/165 (44%), Gaps = 29/165 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP K +A PY W T IGY K + AP++ W PE + +S +++
Sbjct: 124 DPDNK-FAMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDA 182
Query: 281 PREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAV 325
P EV A +L L L +R F S+ Y+ GD+ VA+
Sbjct: 183 PEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 242
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 243 GWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|194428217|ref|ZP_03060760.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli B171]
gi|415803209|ref|ZP_11500357.1| putrescine-binding periplasmic protein [Escherichia coli E128010]
gi|417622217|ref|ZP_12272541.1| putrescine-binding periplasmic protein [Escherichia coli
STEC_H.1.8]
gi|419310481|ref|ZP_13852352.1| putrescine-binding periplasmic protein [Escherichia coli DEC11E]
gi|419315769|ref|ZP_13857593.1| putrescine-binding periplasmic protein [Escherichia coli DEC12A]
gi|419321715|ref|ZP_13863447.1| potF [Escherichia coli DEC12B]
gi|419327845|ref|ZP_13869473.1| putrescine-binding periplasmic protein [Escherichia coli DEC12C]
gi|419333369|ref|ZP_13874924.1| potF [Escherichia coli DEC12D]
gi|419338686|ref|ZP_13880171.1| potF [Escherichia coli DEC12E]
gi|194413777|gb|EDX30056.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli B171]
gi|323159676|gb|EFZ45655.1| putrescine-binding periplasmic protein [Escherichia coli E128010]
gi|345385041|gb|EGX14891.1| putrescine-binding periplasmic protein [Escherichia coli
STEC_H.1.8]
gi|378160196|gb|EHX21193.1| putrescine-binding periplasmic protein [Escherichia coli DEC11E]
gi|378173150|gb|EHX33994.1| potF [Escherichia coli DEC12B]
gi|378173861|gb|EHX34694.1| putrescine-binding periplasmic protein [Escherichia coli DEC12A]
gi|378175304|gb|EHX36122.1| putrescine-binding periplasmic protein [Escherichia coli DEC12C]
gi|378188605|gb|EHX49201.1| potF [Escherichia coli DEC12D]
gi|378193209|gb|EHX53750.1| potF [Escherichia coli DEC12E]
Length = 370
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 73/165 (44%), Gaps = 29/165 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP K +A PY W T IGY K + AP++ W PE + +S +++
Sbjct: 124 DPDNK-FAMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDA 182
Query: 281 PREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAV 325
P EV A +L L L +R F S+ Y+ GD+ VA+
Sbjct: 183 PEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 242
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 243 GWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|157160376|ref|YP_001457694.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli HS]
gi|170020743|ref|YP_001725697.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
coli ATCC 8739]
gi|193069329|ref|ZP_03050284.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli E110019]
gi|194438393|ref|ZP_03070483.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli 101-1]
gi|251784398|ref|YP_002998702.1| potF, subunit of putrescine ABC transporter [Escherichia coli
BL21(DE3)]
gi|253774116|ref|YP_003036947.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli 'BL21-Gold(DE3)pLysS
AG']
gi|254160969|ref|YP_003044077.1| putrescine transporter subunit periplasmic-binding component of ABC
superfamily [Escherichia coli B str. REL606]
gi|254287777|ref|YP_003053525.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
coli BL21(DE3)]
gi|293414132|ref|ZP_06656781.1| hypothetical protein ECDG_00683 [Escherichia coli B185]
gi|312970978|ref|ZP_07785157.1| putrescine-binding periplasmic protein [Escherichia coli 1827-70]
gi|417120464|ref|ZP_11970022.1| putrescine-binding periplasmic protein [Escherichia coli 97.0246]
gi|417627783|ref|ZP_12278030.1| putrescine-binding periplasmic protein [Escherichia coli
STEC_MHI813]
gi|417690217|ref|ZP_12339441.1| putrescine-binding periplasmic protein [Shigella boydii 5216-82]
gi|421776936|ref|ZP_16213537.1| bacterial extracellular solute-binding protein [Escherichia coli
AD30]
gi|422835645|ref|ZP_16883698.1| putrescine-binding periplasmic protein [Escherichia coli E101]
gi|425287734|ref|ZP_18678640.1| putrescine-binding periplasmic protein [Escherichia coli 3006]
gi|432453610|ref|ZP_19695847.1| putrescine-binding periplasmic protein [Escherichia coli KTE193]
gi|432530189|ref|ZP_19767229.1| putrescine-binding periplasmic protein [Escherichia coli KTE233]
gi|432542240|ref|ZP_19779096.1| putrescine-binding periplasmic protein [Escherichia coli KTE236]
gi|432547710|ref|ZP_19784497.1| putrescine-binding periplasmic protein [Escherichia coli KTE237]
gi|432620994|ref|ZP_19857035.1| putrescine-binding periplasmic protein [Escherichia coli KTE76]
gi|432673850|ref|ZP_19909339.1| putrescine-binding periplasmic protein [Escherichia coli KTE142]
gi|432814491|ref|ZP_20048281.1| putrescine-binding periplasmic protein [Escherichia coli KTE115]
gi|433032350|ref|ZP_20220124.1| putrescine-binding periplasmic protein [Escherichia coli KTE112]
gi|442599401|ref|ZP_21017119.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Escherichia coli O5:K4(L):H4 str. ATCC
23502]
gi|157066056|gb|ABV05311.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli HS]
gi|169755671|gb|ACA78370.1| extracellular solute-binding protein family 1 [Escherichia coli
ATCC 8739]
gi|192957282|gb|EDV87730.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli E110019]
gi|194422617|gb|EDX38614.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli 101-1]
gi|242376671|emb|CAQ31382.1| potF, subunit of putrescine ABC transporter [Escherichia coli
BL21(DE3)]
gi|253325160|gb|ACT29762.1| extracellular solute-binding protein family 1 [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|253972870|gb|ACT38541.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli B str. REL606]
gi|253977084|gb|ACT42754.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli BL21(DE3)]
gi|291434190|gb|EFF07163.1| hypothetical protein ECDG_00683 [Escherichia coli B185]
gi|310336739|gb|EFQ01906.1| putrescine-binding periplasmic protein [Escherichia coli 1827-70]
gi|332088887|gb|EGI93999.1| putrescine-binding periplasmic protein [Shigella boydii 5216-82]
gi|345378087|gb|EGX10018.1| putrescine-binding periplasmic protein [Escherichia coli
STEC_MHI813]
gi|371611824|gb|EHO00343.1| putrescine-binding periplasmic protein [Escherichia coli E101]
gi|386149119|gb|EIG95551.1| putrescine-binding periplasmic protein [Escherichia coli 97.0246]
gi|408216953|gb|EKI41240.1| putrescine-binding periplasmic protein [Escherichia coli 3006]
gi|408458050|gb|EKJ81840.1| bacterial extracellular solute-binding protein [Escherichia coli
AD30]
gi|430973749|gb|ELC90694.1| putrescine-binding periplasmic protein [Escherichia coli KTE193]
gi|431056563|gb|ELD66064.1| putrescine-binding periplasmic protein [Escherichia coli KTE233]
gi|431076494|gb|ELD83989.1| putrescine-binding periplasmic protein [Escherichia coli KTE236]
gi|431083646|gb|ELD89818.1| putrescine-binding periplasmic protein [Escherichia coli KTE237]
gi|431161460|gb|ELE61931.1| putrescine-binding periplasmic protein [Escherichia coli KTE76]
gi|431217224|gb|ELF14804.1| putrescine-binding periplasmic protein [Escherichia coli KTE142]
gi|431366714|gb|ELG53211.1| putrescine-binding periplasmic protein [Escherichia coli KTE115]
gi|431558736|gb|ELI32345.1| putrescine-binding periplasmic protein [Escherichia coli KTE112]
gi|441651671|emb|CCQ02616.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Escherichia coli O5:K4(L):H4 str. ATCC
23502]
Length = 370
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 73/165 (44%), Gaps = 29/165 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP K +A PY W T IGY K + AP++ W PE + +S +++
Sbjct: 124 DPDNK-FAMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDA 182
Query: 281 PREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAV 325
P EV A +L L L +R F S+ Y+ GD+ VA+
Sbjct: 183 PEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 242
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 243 GWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|456354549|dbj|BAM88994.1| putrescine ABC transporter periplasmic binding protein [Agromonas
oligotrophica S58]
Length = 374
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 86/199 (43%), Gaps = 36/199 (18%)
Query: 191 IKKRFIEPIAEAEDQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIGYKKS 250
IK R +P+ D+ L++ W V + DP G +AA Y WGT IGY
Sbjct: 98 IKARIFQPL----DKSKLPNLANAWPVV--TGRLATYDP-GNQFAANYMWGTTGIGYNVK 150
Query: 251 KFQNHNLAP---IEDWKDPWWPELAGR-----ISMVNSPREVIVAG----------GKIA 292
+ L P I+ W + PE + + M++S ++ A + A
Sbjct: 151 AIEKI-LGPGAQIDSWDIVFKPENLAKFKDCGVHMLDSADDIFPAALNFLGLDPNSTRQA 209
Query: 293 VQQNLA----LLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVA 342
+N A +A VR F S+ YL A G++ + VGWS D++ A R +
Sbjct: 210 DLENAADVVGKVAPSVRKFHSSEYLNALATGEICLVVGWSGDIMQARSRAEEAKNGVEIG 269
Query: 343 VVVPKSGASLWADLWAIPA 361
+PK GA ++ D AIPA
Sbjct: 270 YAIPKQGAQMFFDNLAIPA 288
>gi|255029864|ref|ZP_05301815.1| spermidine/putrescine-binding protein [Listeria monocytogenes LO28]
Length = 296
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 91/203 (44%), Gaps = 34/203 (16%)
Query: 234 WAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVIVAG----G 289
++ PY WGT+ I Y K F + N + W + PEL +I +++ REV+ G G
Sbjct: 71 YSMPYFWGTLGIIYNKEMFPDKNF---DTWNALFDPELKNQILLIDGAREVMGLGLNSLG 127
Query: 290 KIAVQQNLA-LLANQVRLFDSTHYLKAFGIGD----------VWVAVGWSSDVLPAVKRM 338
N A L A + +L T +KA +GD VAV +S + +
Sbjct: 128 YSLNDTNKAHLQAARDKLETMTPNVKAI-VGDEIKLLMADNEAGVAVTFSGEAAEMLSEN 186
Query: 339 SNVAVVVPKSGASLWADLWAIPAASRLETKQIGGQVRGPSPLIHQWIEFCLQTARALPFK 398
++ V+PK G++LW D IP + K + G H++I F L+ A
Sbjct: 187 EDLEYVIPKDGSNLWFDNMVIPKTA----KNVDGA--------HKFINFMLKPENA-AIN 233
Query: 399 QEVIPGASPSALESTLVKLPEEL 421
E + A+P+A L LP+E+
Sbjct: 234 AEYVGYATPNAKAVEL--LPKEI 254
>gi|425304379|ref|ZP_18694159.1| putrescine-binding periplasmic protein [Escherichia coli N1]
gi|408231148|gb|EKI54444.1| putrescine-binding periplasmic protein [Escherichia coli N1]
Length = 370
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 73/165 (44%), Gaps = 29/165 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP K +A PY W T IGY K + AP++ W PE + +S +++
Sbjct: 124 DPDNK-FAMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDA 182
Query: 281 PREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAV 325
P EV A +L L L +R F S+ Y+ GD+ VA+
Sbjct: 183 PEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 242
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 243 GWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|366159061|ref|ZP_09458923.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia sp. TW09308]
gi|432371595|ref|ZP_19614648.1| putrescine-binding periplasmic protein [Escherichia coli KTE11]
gi|430899033|gb|ELC21139.1| putrescine-binding periplasmic protein [Escherichia coli KTE11]
Length = 370
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 73/165 (44%), Gaps = 29/165 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP G +A PY W T IGY K + AP++ W PE + +S +++
Sbjct: 124 DP-GNKFAMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDA 182
Query: 281 PREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAV 325
P EV A +L L L +R F S+ Y+ GD+ VA+
Sbjct: 183 PEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 242
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 243 GWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|417340403|ref|ZP_12121730.1| Putrescine ABC transporter putrescine-binding protein PotF, partial
[Salmonella enterica subsp. enterica serovar Baildon
str. R6-199]
gi|357959170|gb|EHJ83510.1| Putrescine ABC transporter putrescine-binding protein PotF, partial
[Salmonella enterica subsp. enterica serovar Baildon
str. R6-199]
Length = 294
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 72/165 (43%), Gaps = 29/165 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP K +A PY W T IGY K + + AP+ W PE + +S +++
Sbjct: 79 DPDNK-YAMPYMWATTGIGYNVDKVKAVLGDDAPVNSWDLVLKPENLEKLKSCGVSFLDA 137
Query: 281 PREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAV 325
P E+ A +L L L +R F S+ Y+ GD VA+
Sbjct: 138 PEEIFATVLNYLGKDPNSSKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDTCVAI 197
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
GW+ DV A R N++ +PK GA + D++A+PA ++
Sbjct: 198 GWAGDVWQAANRAKEAKNGVNISFSIPKEGAMAFFDVFAMPADAK 242
>gi|255521833|ref|ZP_05389070.1| spermidine/putrescine-binding protein [Listeria monocytogenes FSL
J1-175]
Length = 287
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 91/203 (44%), Gaps = 34/203 (16%)
Query: 234 WAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVIVAG----G 289
++ PY WGT+ I Y K F + N + W + PEL +I +++ REV+ G G
Sbjct: 62 YSMPYFWGTLGIIYNKEMFPDKNF---DTWNALFDPELKNQILLIDGAREVMGLGLNSLG 118
Query: 290 KIAVQQNLA-LLANQVRLFDSTHYLKAFGIGD----------VWVAVGWSSDVLPAVKRM 338
N A L A + +L T +KA +GD VAV +S + +
Sbjct: 119 YSLNDTNKAHLQAARDKLETMTPNVKAI-VGDEIKLLMADNEAGVAVTFSGEAAEMLSEN 177
Query: 339 SNVAVVVPKSGASLWADLWAIPAASRLETKQIGGQVRGPSPLIHQWIEFCLQTARALPFK 398
++ V+PK G++LW D IP + K + G H++I F L+ A
Sbjct: 178 EDLEYVIPKDGSNLWFDNMVIPKTA----KNVDGA--------HKFINFMLKPENA-AIN 224
Query: 399 QEVIPGASPSALESTLVKLPEEL 421
E + A+P+A L LP+E+
Sbjct: 225 AEYVGYATPNAKAVEL--LPKEI 245
>gi|16128822|ref|NP_415375.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli str. K-12 substr.
MG1655]
gi|82543342|ref|YP_407289.1| putrescine ABC transporter periplasmic-binding protein [Shigella
boydii Sb227]
gi|170080513|ref|YP_001729833.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
coli str. K-12 substr. DH10B]
gi|187731226|ref|YP_001880949.1| putrescine ABC transporter periplasmic-binding protein [Shigella
boydii CDC 3083-94]
gi|218694328|ref|YP_002401995.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
coli 55989]
gi|238900113|ref|YP_002925909.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
coli BW2952]
gi|293433152|ref|ZP_06661580.1| hypothetical protein ECCG_01277 [Escherichia coli B088]
gi|331667228|ref|ZP_08368093.1| putrescine-binding periplasmic protein [Escherichia coli TA271]
gi|386279901|ref|ZP_10057574.1| putrescine-binding periplasmic protein [Escherichia sp. 4_1_40B]
gi|386596310|ref|YP_006092710.1| extracellular solute-binding protein [Escherichia coli DH1]
gi|387620580|ref|YP_006128207.1| putrescine transporter subunit:periplasmic-binding component of ABC
superfamily [Escherichia coli DH1]
gi|388476939|ref|YP_489127.1| putrescine transporter subunit [Escherichia coli str. K-12 substr.
W3110]
gi|407468328|ref|YP_006785230.1| putrescine ABC transporter substrate-binding protein [Escherichia
coli O104:H4 str. 2009EL-2071]
gi|407482940|ref|YP_006780089.1| putrescine ABC transporter substrate-binding protein [Escherichia
coli O104:H4 str. 2011C-3493]
gi|410483492|ref|YP_006771038.1| putrescine ABC transporter substrate-binding protein [Escherichia
coli O104:H4 str. 2009EL-2050]
gi|415812750|ref|ZP_11504845.1| putrescine-binding periplasmic protein [Escherichia coli LT-68]
gi|415827641|ref|ZP_11514466.1| putrescine-binding periplasmic protein [Escherichia coli OK1357]
gi|416267761|ref|ZP_11641934.1| Putrescine ABC transporter putrescine-binding protein PotF
[Shigella dysenteriae CDC 74-1112]
gi|416304941|ref|ZP_11654096.1| Putrescine ABC transporter putrescine-binding protein PotF
[Shigella flexneri CDC 796-83]
gi|416345141|ref|ZP_11678784.1| Putrescine ABC transporter putrescine-binding protein PotF
[Escherichia coli EC4100B]
gi|417224560|ref|ZP_12027851.1| putrescine-binding periplasmic protein [Escherichia coli 96.154]
gi|417241354|ref|ZP_12037300.1| putrescine-binding periplasmic protein [Escherichia coli 9.0111]
gi|417262034|ref|ZP_12049522.1| putrescine-binding periplasmic protein [Escherichia coli 2.3916]
gi|417268341|ref|ZP_12055702.1| putrescine-binding periplasmic protein [Escherichia coli 3.3884]
gi|417274279|ref|ZP_12061619.1| putrescine-binding periplasmic protein [Escherichia coli 2.4168]
gi|417277787|ref|ZP_12065108.1| putrescine-binding periplasmic protein [Escherichia coli 3.2303]
gi|417290075|ref|ZP_12077358.1| putrescine-binding periplasmic protein [Escherichia coli B41]
gi|417607078|ref|ZP_12257597.1| putrescine-binding periplasmic protein [Escherichia coli
STEC_DG131-3]
gi|417611949|ref|ZP_12262421.1| putrescine-binding periplasmic protein [Escherichia coli
STEC_EH250]
gi|417617293|ref|ZP_12267723.1| putrescine-binding periplasmic protein [Escherichia coli G58-1]
gi|417633487|ref|ZP_12283706.1| putrescine-binding periplasmic protein [Escherichia coli
STEC_S1191]
gi|417681255|ref|ZP_12330633.1| putrescine-binding periplasmic protein [Shigella boydii 3594-74]
gi|417804235|ref|ZP_12451266.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O104:H4 str. LB226692]
gi|417831986|ref|ZP_12478506.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O104:H4 str. 01-09591]
gi|417864139|ref|ZP_12509186.1| potF [Escherichia coli O104:H4 str. C227-11]
gi|417943847|ref|ZP_12587093.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli XH140A]
gi|417975178|ref|ZP_12615978.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli XH001]
gi|418042980|ref|ZP_12681161.1| bacterial extracellular solute-binding protein [Escherichia coli
W26]
gi|418301780|ref|ZP_12913574.1| putrescine-binding periplasmic protein [Escherichia coli UMNF18]
gi|418958811|ref|ZP_13510721.1| bacterial extracellular solute-binding protein [Escherichia coli
J53]
gi|419141372|ref|ZP_13686126.1| putrescine-binding periplasmic protein [Escherichia coli DEC6A]
gi|419152772|ref|ZP_13697355.1| putrescine-binding periplasmic protein [Escherichia coli DEC6C]
gi|419158187|ref|ZP_13702704.1| putrescine-binding periplasmic protein [Escherichia coli DEC6D]
gi|419163121|ref|ZP_13707597.1| potF [Escherichia coli DEC6E]
gi|419174361|ref|ZP_13718213.1| potF [Escherichia coli DEC7B]
gi|419277125|ref|ZP_13819386.1| potF [Escherichia coli DEC10E]
gi|419344479|ref|ZP_13885861.1| potF [Escherichia coli DEC13A]
gi|419348918|ref|ZP_13890271.1| potF [Escherichia coli DEC13B]
gi|419353906|ref|ZP_13895188.1| potF [Escherichia coli DEC13C]
gi|419359301|ref|ZP_13900526.1| potF [Escherichia coli DEC13D]
gi|419364270|ref|ZP_13905448.1| potF [Escherichia coli DEC13E]
gi|419374613|ref|ZP_13915661.1| potF [Escherichia coli DEC14B]
gi|419379848|ref|ZP_13920820.1| potF [Escherichia coli DEC14C]
gi|419385250|ref|ZP_13926138.1| potF [Escherichia coli DEC14D]
gi|419390310|ref|ZP_13931144.1| potF [Escherichia coli DEC15A]
gi|419400824|ref|ZP_13941555.1| potF [Escherichia coli DEC15C]
gi|419406035|ref|ZP_13946734.1| potF [Escherichia coli DEC15D]
gi|419411498|ref|ZP_13952166.1| potF [Escherichia coli DEC15E]
gi|419809532|ref|ZP_14334417.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O32:H37 str. P4]
gi|419925739|ref|ZP_14443568.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli 541-15]
gi|419940973|ref|ZP_14457687.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli 75]
gi|420324628|ref|ZP_14826408.1| putrescine-binding periplasmic protein [Shigella flexneri CCH060]
gi|420353441|ref|ZP_14854558.1| putrescine-binding periplasmic protein [Shigella boydii 4444-74]
gi|421681582|ref|ZP_16121408.1| potF [Shigella flexneri 1485-80]
gi|422819882|ref|ZP_16868092.1| putrescine-binding periplasmic protein [Escherichia coli M919]
gi|422991589|ref|ZP_16982360.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. C227-11]
gi|422993531|ref|ZP_16984295.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. C236-11]
gi|422998742|ref|ZP_16989498.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 09-7901]
gi|423007203|ref|ZP_16997946.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 04-8351]
gi|423008849|ref|ZP_16999587.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-3677]
gi|423023037|ref|ZP_17013740.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-4404]
gi|423028189|ref|ZP_17018882.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-4522]
gi|423034023|ref|ZP_17024707.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-4623]
gi|423036889|ref|ZP_17027563.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-4632 C1]
gi|423042008|ref|ZP_17032675.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-4632 C2]
gi|423048698|ref|ZP_17039355.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-4632 C3]
gi|423052280|ref|ZP_17041088.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-4632 C4]
gi|423059246|ref|ZP_17048042.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-4632 C5]
gi|423701702|ref|ZP_17676161.1| putrescine-binding periplasmic protein [Escherichia coli H730]
gi|423708776|ref|ZP_17683154.1| putrescine-binding periplasmic protein [Escherichia coli B799]
gi|425114214|ref|ZP_18516035.1| bacterial extracellular solute-binding protein [Escherichia coli
8.0566]
gi|425118923|ref|ZP_18520645.1| putrescine-binding periplasmic protein [Escherichia coli 8.0569]
gi|425271605|ref|ZP_18663100.1| putrescine-binding periplasmic protein [Escherichia coli TW15901]
gi|425282258|ref|ZP_18673363.1| putrescine-binding periplasmic protein [Escherichia coli TW00353]
gi|429723080|ref|ZP_19257969.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. Ec11-9450]
gi|429775254|ref|ZP_19307252.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-02030]
gi|429780443|ref|ZP_19312392.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-02033-1]
gi|429784494|ref|ZP_19316403.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-02092]
gi|429789831|ref|ZP_19321703.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-02093]
gi|429796061|ref|ZP_19327884.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-02281]
gi|429801986|ref|ZP_19333761.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-02318]
gi|429805618|ref|ZP_19337362.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-02913]
gi|429811214|ref|ZP_19342913.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-03439]
gi|429816565|ref|ZP_19348221.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-04080]
gi|429821773|ref|ZP_19353385.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-03943]
gi|429907442|ref|ZP_19373410.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. Ec11-9990]
gi|429911643|ref|ZP_19377599.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. Ec11-9941]
gi|429917478|ref|ZP_19383418.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. Ec11-4984]
gi|429922516|ref|ZP_19388437.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. Ec11-5604]
gi|429923369|ref|ZP_19389285.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. Ec11-4986]
gi|429932264|ref|ZP_19398158.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. Ec11-4987]
gi|429933866|ref|ZP_19399756.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. Ec11-4988]
gi|429939525|ref|ZP_19405399.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. Ec11-5603]
gi|429947167|ref|ZP_19413022.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. Ec11-6006]
gi|429949799|ref|ZP_19415647.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. Ec12-0465]
gi|429958077|ref|ZP_19423906.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. Ec12-0466]
gi|432375966|ref|ZP_19618974.1| putrescine-binding periplasmic protein [Escherichia coli KTE12]
gi|432415841|ref|ZP_19658465.1| putrescine-binding periplasmic protein [Escherichia coli KTE44]
gi|432480228|ref|ZP_19722190.1| putrescine-binding periplasmic protein [Escherichia coli KTE210]
gi|432533080|ref|ZP_19770071.1| putrescine-binding periplasmic protein [Escherichia coli KTE234]
gi|432562836|ref|ZP_19799456.1| putrescine-binding periplasmic protein [Escherichia coli KTE51]
gi|432626460|ref|ZP_19862441.1| putrescine-binding periplasmic protein [Escherichia coli KTE77]
gi|432636127|ref|ZP_19872009.1| putrescine-binding periplasmic protein [Escherichia coli KTE81]
gi|432660081|ref|ZP_19895731.1| putrescine-binding periplasmic protein [Escherichia coli KTE111]
gi|432684658|ref|ZP_19919970.1| putrescine-binding periplasmic protein [Escherichia coli KTE156]
gi|432690779|ref|ZP_19926018.1| putrescine-binding periplasmic protein [Escherichia coli KTE161]
gi|432703423|ref|ZP_19938542.1| putrescine-binding periplasmic protein [Escherichia coli KTE171]
gi|432736354|ref|ZP_19971125.1| putrescine-binding periplasmic protein [Escherichia coli KTE42]
gi|432812956|ref|ZP_20046801.1| putrescine-binding periplasmic protein [Escherichia coli KTE101]
gi|432833936|ref|ZP_20067478.1| putrescine-binding periplasmic protein [Escherichia coli KTE136]
gi|432954154|ref|ZP_20146273.1| putrescine-binding periplasmic protein [Escherichia coli KTE197]
gi|433046991|ref|ZP_20234401.1| putrescine-binding periplasmic protein [Escherichia coli KTE120]
gi|442593231|ref|ZP_21011185.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Escherichia coli O10:K5(L):H4 str. ATCC
23506]
gi|450240880|ref|ZP_21899436.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli S17]
gi|2507606|sp|P31133.3|POTF_ECOLI RecName: Full=Putrescine-binding periplasmic protein; Flags:
Precursor
gi|1651387|dbj|BAA35565.1| putrescine transporter subunit [Escherichia coli str. K12 substr.
W3110]
gi|1787078|gb|AAC73941.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli str. K-12 substr.
MG1655]
gi|81244753|gb|ABB65461.1| periplasmic putrescine-binding protein [Shigella boydii Sb227]
gi|169888348|gb|ACB02055.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli str. K-12 substr.
DH10B]
gi|187428218|gb|ACD07492.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Shigella boydii CDC 3083-94]
gi|218351060|emb|CAU96764.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli 55989]
gi|238863342|gb|ACR65340.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli BW2952]
gi|260449999|gb|ACX40421.1| extracellular solute-binding protein family 1 [Escherichia coli
DH1]
gi|291323971|gb|EFE63393.1| hypothetical protein ECCG_01277 [Escherichia coli B088]
gi|315135503|dbj|BAJ42662.1| putrescine transporter subunit:periplasmic-binding component of ABC
superfamily [Escherichia coli DH1]
gi|320175294|gb|EFW50400.1| Putrescine ABC transporter putrescine-binding protein PotF
[Shigella dysenteriae CDC 74-1112]
gi|320183206|gb|EFW58064.1| Putrescine ABC transporter putrescine-binding protein PotF
[Shigella flexneri CDC 796-83]
gi|320199089|gb|EFW73686.1| Putrescine ABC transporter putrescine-binding protein PotF
[Escherichia coli EC4100B]
gi|323172180|gb|EFZ57818.1| putrescine-binding periplasmic protein [Escherichia coli LT-68]
gi|323185182|gb|EFZ70547.1| putrescine-binding periplasmic protein [Escherichia coli OK1357]
gi|331065584|gb|EGI37477.1| putrescine-binding periplasmic protein [Escherichia coli TA271]
gi|332097188|gb|EGJ02171.1| putrescine-binding periplasmic protein [Shigella boydii 3594-74]
gi|339413878|gb|AEJ55550.1| putrescine-binding periplasmic protein [Escherichia coli UMNF18]
gi|340735276|gb|EGR64334.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O104:H4 str. 01-09591]
gi|340741099|gb|EGR75249.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O104:H4 str. LB226692]
gi|341917428|gb|EGT67044.1| potF [Escherichia coli O104:H4 str. C227-11]
gi|342364333|gb|EGU28434.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli XH140A]
gi|344195169|gb|EGV49239.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli XH001]
gi|345363669|gb|EGW95810.1| putrescine-binding periplasmic protein [Escherichia coli
STEC_DG131-3]
gi|345365298|gb|EGW97407.1| putrescine-binding periplasmic protein [Escherichia coli
STEC_EH250]
gi|345380465|gb|EGX12364.1| putrescine-binding periplasmic protein [Escherichia coli G58-1]
gi|345390201|gb|EGX20000.1| putrescine-binding periplasmic protein [Escherichia coli
STEC_S1191]
gi|354856591|gb|EHF17049.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 04-8351]
gi|354857838|gb|EHF18291.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. C227-11]
gi|354864606|gb|EHF25035.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. C236-11]
gi|354874919|gb|EHF35285.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 09-7901]
gi|354878879|gb|EHF39226.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-4404]
gi|354882671|gb|EHF42993.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-3677]
gi|354884293|gb|EHF44606.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-4522]
gi|354887350|gb|EHF47625.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-4623]
gi|354900545|gb|EHF60679.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-4632 C1]
gi|354903690|gb|EHF63790.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-4632 C2]
gi|354906053|gb|EHF66135.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-4632 C3]
gi|354916970|gb|EHF76940.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-4632 C5]
gi|354921031|gb|EHF80956.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-4632 C4]
gi|359331546|dbj|BAL37993.1| putrescine transporter subunit [Escherichia coli str. K-12 substr.
MDS42]
gi|377998987|gb|EHV62074.1| putrescine-binding periplasmic protein [Escherichia coli DEC6A]
gi|378002122|gb|EHV65175.1| putrescine-binding periplasmic protein [Escherichia coli DEC6C]
gi|378012276|gb|EHV75208.1| putrescine-binding periplasmic protein [Escherichia coli DEC6D]
gi|378015823|gb|EHV78714.1| potF [Escherichia coli DEC6E]
gi|378036704|gb|EHV99243.1| potF [Escherichia coli DEC7B]
gi|378132294|gb|EHW93646.1| potF [Escherichia coli DEC10E]
gi|378188907|gb|EHX49501.1| potF [Escherichia coli DEC13A]
gi|378204580|gb|EHX64996.1| potF [Escherichia coli DEC13B]
gi|378206760|gb|EHX67162.1| potF [Escherichia coli DEC13D]
gi|378207878|gb|EHX68266.1| potF [Escherichia coli DEC13C]
gi|378217725|gb|EHX78001.1| potF [Escherichia coli DEC13E]
gi|378223981|gb|EHX84189.1| potF [Escherichia coli DEC14B]
gi|378232035|gb|EHX92138.1| potF [Escherichia coli DEC14C]
gi|378234699|gb|EHX94775.1| potF [Escherichia coli DEC14D]
gi|378242613|gb|EHY02565.1| potF [Escherichia coli DEC15A]
gi|378251129|gb|EHY11030.1| potF [Escherichia coli DEC15C]
gi|378256876|gb|EHY16721.1| potF [Escherichia coli DEC15D]
gi|378260718|gb|EHY20518.1| potF [Escherichia coli DEC15E]
gi|383474083|gb|EID66081.1| bacterial extracellular solute-binding protein [Escherichia coli
W26]
gi|384378552|gb|EIE36433.1| bacterial extracellular solute-binding protein [Escherichia coli
J53]
gi|385157713|gb|EIF19704.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O32:H37 str. P4]
gi|385536497|gb|EIF83390.1| putrescine-binding periplasmic protein [Escherichia coli M919]
gi|385707497|gb|EIG44528.1| putrescine-binding periplasmic protein [Escherichia coli B799]
gi|385711690|gb|EIG48647.1| putrescine-binding periplasmic protein [Escherichia coli H730]
gi|386122970|gb|EIG71574.1| putrescine-binding periplasmic protein [Escherichia sp. 4_1_40B]
gi|386199608|gb|EIH98599.1| putrescine-binding periplasmic protein [Escherichia coli 96.154]
gi|386212035|gb|EII22484.1| putrescine-binding periplasmic protein [Escherichia coli 9.0111]
gi|386225161|gb|EII47496.1| putrescine-binding periplasmic protein [Escherichia coli 2.3916]
gi|386230699|gb|EII58054.1| putrescine-binding periplasmic protein [Escherichia coli 3.3884]
gi|386232707|gb|EII64692.1| putrescine-binding periplasmic protein [Escherichia coli 2.4168]
gi|386239474|gb|EII76403.1| putrescine-binding periplasmic protein [Escherichia coli 3.2303]
gi|386256113|gb|EIJ05801.1| putrescine-binding periplasmic protein [Escherichia coli B41]
gi|388385634|gb|EIL47309.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli 541-15]
gi|388401822|gb|EIL62435.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli 75]
gi|391255716|gb|EIQ14857.1| putrescine-binding periplasmic protein [Shigella flexneri CCH060]
gi|391278930|gb|EIQ37626.1| putrescine-binding periplasmic protein [Shigella boydii 4444-74]
gi|404341533|gb|EJZ67939.1| potF [Shigella flexneri 1485-80]
gi|406778654|gb|AFS58078.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O104:H4 str.
2009EL-2050]
gi|407055237|gb|AFS75288.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O104:H4 str.
2011C-3493]
gi|407064363|gb|AFS85410.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O104:H4 str.
2009EL-2071]
gi|408197064|gb|EKI22335.1| putrescine-binding periplasmic protein [Escherichia coli TW15901]
gi|408205387|gb|EKI30275.1| putrescine-binding periplasmic protein [Escherichia coli TW00353]
gi|408571926|gb|EKK47853.1| bacterial extracellular solute-binding protein [Escherichia coli
8.0566]
gi|408572938|gb|EKK48819.1| putrescine-binding periplasmic protein [Escherichia coli 8.0569]
gi|429349989|gb|EKY86724.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-02030]
gi|429350701|gb|EKY87426.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-02033-1]
gi|429351079|gb|EKY87800.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-02092]
gi|429365357|gb|EKZ01970.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-02093]
gi|429366308|gb|EKZ02911.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-02281]
gi|429368871|gb|EKZ05454.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-02318]
gi|429381278|gb|EKZ17765.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-02913]
gi|429382246|gb|EKZ18711.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-03439]
gi|429383681|gb|EKZ20140.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-03943]
gi|429395512|gb|EKZ31878.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-04080]
gi|429396726|gb|EKZ33074.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. Ec11-9450]
gi|429397604|gb|EKZ33950.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. Ec11-9990]
gi|429409332|gb|EKZ45562.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. Ec11-4984]
gi|429417792|gb|EKZ53939.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. Ec11-4987]
gi|429421461|gb|EKZ57582.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. Ec11-4988]
gi|429423201|gb|EKZ59309.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. Ec11-4986]
gi|429427203|gb|EKZ63288.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. Ec11-5603]
gi|429434085|gb|EKZ70114.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. Ec11-5604]
gi|429438072|gb|EKZ74066.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. Ec12-0465]
gi|429443428|gb|EKZ79380.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. Ec11-6006]
gi|429449531|gb|EKZ85430.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. Ec12-0466]
gi|429455407|gb|EKZ91263.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. Ec11-9941]
gi|430900594|gb|ELC22612.1| putrescine-binding periplasmic protein [Escherichia coli KTE12]
gi|430942386|gb|ELC62519.1| putrescine-binding periplasmic protein [Escherichia coli KTE44]
gi|431009710|gb|ELD24324.1| putrescine-binding periplasmic protein [Escherichia coli KTE210]
gi|431062801|gb|ELD72061.1| putrescine-binding periplasmic protein [Escherichia coli KTE234]
gi|431097397|gb|ELE02725.1| putrescine-binding periplasmic protein [Escherichia coli KTE51]
gi|431164408|gb|ELE64799.1| putrescine-binding periplasmic protein [Escherichia coli KTE77]
gi|431173021|gb|ELE73102.1| putrescine-binding periplasmic protein [Escherichia coli KTE81]
gi|431201953|gb|ELF00649.1| putrescine-binding periplasmic protein [Escherichia coli KTE111]
gi|431224165|gb|ELF21394.1| putrescine-binding periplasmic protein [Escherichia coli KTE156]
gi|431229165|gb|ELF25817.1| putrescine-binding periplasmic protein [Escherichia coli KTE161]
gi|431245988|gb|ELF40266.1| putrescine-binding periplasmic protein [Escherichia coli KTE171]
gi|431285894|gb|ELF76729.1| putrescine-binding periplasmic protein [Escherichia coli KTE42]
gi|431356162|gb|ELG42853.1| putrescine-binding periplasmic protein [Escherichia coli KTE101]
gi|431386817|gb|ELG70770.1| putrescine-binding periplasmic protein [Escherichia coli KTE136]
gi|431469452|gb|ELH49381.1| putrescine-binding periplasmic protein [Escherichia coli KTE197]
gi|431571099|gb|ELI44006.1| putrescine-binding periplasmic protein [Escherichia coli KTE120]
gi|441606984|emb|CCP96512.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Escherichia coli O10:K5(L):H4 str. ATCC
23506]
gi|449324103|gb|EMD14041.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli S17]
Length = 370
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 73/165 (44%), Gaps = 29/165 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP K +A PY W T IGY K + AP++ W PE + +S +++
Sbjct: 124 DPDNK-FAMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDA 182
Query: 281 PREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAV 325
P EV A +L L L +R F S+ Y+ GD+ VA+
Sbjct: 183 PEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 242
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 243 GWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|429081852|ref|ZP_19144947.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Cronobacter condimenti 1330]
gi|426549418|emb|CCJ70988.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Cronobacter condimenti 1330]
Length = 370
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 79/185 (42%), Gaps = 31/185 (16%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQNH--NLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP + +A PY W T IGY K + AP+ W PE + +S +++
Sbjct: 124 DPDNQ-YAMPYLWATTGIGYNVDKVKAALGKDAPLNSWDLVLKPENLEKLKSCGVSFLDA 182
Query: 281 PREVIVAG----GK-----------IAVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAV 325
P E+ GK +A L L +R F S+ Y+ GD+ VA+
Sbjct: 183 PEEIFATVLNYLGKDPNSSKADDYSVAATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 242
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIP--AASRLETKQIGGQVRGP 377
GW+ DV A R N++ +PK GA + D++A+P A ++ E Q + P
Sbjct: 243 GWAGDVWQAANRAKEAKNGVNISYTIPKEGALAFFDVFAMPADAKNKDEAYQFLNYLMRP 302
Query: 378 SPLIH 382
+ H
Sbjct: 303 DVMAH 307
>gi|407789477|ref|ZP_11136578.1| spermidine/putrescine-binding periplasmic protein [Gallaecimonas
xiamenensis 3-C-1]
gi|407206835|gb|EKE76785.1| spermidine/putrescine-binding periplasmic protein [Gallaecimonas
xiamenensis 3-C-1]
Length = 347
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 70/150 (46%), Gaps = 19/150 (12%)
Query: 230 RGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVIVAG- 288
+G ++ PY WG+ +IG + + I WKD + PE GR+ + + REV G
Sbjct: 120 KGNQYSVPYFWGSTSIGVNAEEI---DPKTITSWKDLFKPEFKGRLLLTDDVREVFQIGL 176
Query: 289 ---GKIAVQQNLA-----------LLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPA 334
G A + A L+AN ++F+S + GDV + + W+ +V A
Sbjct: 177 ALNGHSANTTDEAQIKQAYETLKPLIAN-TQVFNSDAPRLPYLSGDVDIGMIWNGEVYMA 235
Query: 335 VKRMSNVAVVVPKSGASLWADLWAIPAASR 364
N+A + PK GA W D +A+P+ +
Sbjct: 236 NNEGGNLAYIYPKEGAIFWVDSFAVPSHAE 265
>gi|402770567|ref|YP_006590104.1| extracellular solute-binding protein family 1 [Methylocystis sp.
SC2]
gi|401772587|emb|CCJ05453.1| Extracellular solute-binding protein family 1 [Methylocystis sp.
SC2]
Length = 361
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 73/170 (42%), Gaps = 31/170 (18%)
Query: 226 EIDPR------GKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRIS--- 276
EID R G +A Y W T + Y +K Q PI W PE +++
Sbjct: 109 EIDSRLSRFDPGNRYAINYMWYTTGVAYDVAKVQERLGKPITSWDQVLRPENLKKLADCG 168
Query: 277 --MVNSPREVI-VAGGKIAVQQN-------------LALLANQVRLFDSTHYLKAFGIGD 320
M++SP ++ +A + + N L L V+ F S+ Y+ A GD
Sbjct: 169 VYMLDSPEDMFAIALNYLKLDPNSKNPKDLARAAGLLGSLRRYVKKFHSSEYINALANGD 228
Query: 321 VWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
+ VA+GWS D L A R ++A V+P G+ L D AIP +R
Sbjct: 229 ICVAIGWSGDSLQARNRAREAGTDVDIAYVIPTEGSLLSLDNLAIPEDAR 278
>gi|420380950|ref|ZP_14880405.1| putrescine-binding periplasmic protein [Shigella dysenteriae
225-75]
gi|391300985|gb|EIQ58888.1| putrescine-binding periplasmic protein [Shigella dysenteriae
225-75]
Length = 370
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 73/165 (44%), Gaps = 29/165 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP K +A PY W T IGY K + AP++ W PE + +S +++
Sbjct: 124 DPDNK-FAMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDA 182
Query: 281 PREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAV 325
P EV A +L L L +R F S+ Y+ GD+ VA+
Sbjct: 183 PEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 242
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 243 GWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|387606407|ref|YP_006095263.1| putrescine ABC transporter, substrate-binding protein [Escherichia
coli 042]
gi|284920707|emb|CBG33770.1| putrescine ABC transporter, substrate-binding protein [Escherichia
coli 042]
Length = 370
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 73/165 (44%), Gaps = 29/165 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP K +A PY W T IGY K + AP++ W PE + +S +++
Sbjct: 124 DPDNK-FAMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDA 182
Query: 281 PREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAV 325
P EV A +L L L +R F S+ Y+ GD+ VA+
Sbjct: 183 PEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 242
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 243 GWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|74311398|ref|YP_309817.1| putrescine ABC transporter periplasmic-binding protein [Shigella
sonnei Ss046]
gi|383177490|ref|YP_005455495.1| putrescine ABC transporter periplasmic-binding protein [Shigella
sonnei 53G]
gi|414575112|ref|ZP_11432318.1| putrescine-binding periplasmic protein [Shigella sonnei 3233-85]
gi|415850294|ref|ZP_11527214.1| putrescine-binding periplasmic protein [Shigella sonnei 53G]
gi|418263261|ref|ZP_12884326.1| potF [Shigella sonnei str. Moseley]
gi|420357600|ref|ZP_14858606.1| putrescine-binding periplasmic protein [Shigella sonnei 3226-85]
gi|420362455|ref|ZP_14863371.1| potF [Shigella sonnei 4822-66]
gi|73854875|gb|AAZ87582.1| periplasmic putrescine-binding protein [Shigella sonnei Ss046]
gi|323165787|gb|EFZ51573.1| putrescine-binding periplasmic protein [Shigella sonnei 53G]
gi|391287188|gb|EIQ45719.1| putrescine-binding periplasmic protein [Shigella sonnei 3226-85]
gi|391288061|gb|EIQ46570.1| putrescine-binding periplasmic protein [Shigella sonnei 3233-85]
gi|391296028|gb|EIQ54144.1| potF [Shigella sonnei 4822-66]
gi|397902732|gb|EJL19044.1| potF [Shigella sonnei str. Moseley]
Length = 370
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 73/165 (44%), Gaps = 29/165 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP K +A PY W T IGY K + AP++ W PE + +S +++
Sbjct: 124 DPDNK-FAMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDA 182
Query: 281 PREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAV 325
P EV A +L L L +R F S+ Y+ GD+ VA+
Sbjct: 183 PEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 242
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 243 GWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|218553440|ref|YP_002386353.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
coli IAI1]
gi|417130876|ref|ZP_11976147.1| putrescine-binding periplasmic protein [Escherichia coli 5.0588]
gi|419806824|ref|ZP_14331914.1| bacterial extracellular solute-binding protein [Escherichia coli
AI27]
gi|419952129|ref|ZP_14468305.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli CUMT8]
gi|432749336|ref|ZP_19983948.1| putrescine-binding periplasmic protein [Escherichia coli KTE29]
gi|432804981|ref|ZP_20038922.1| putrescine-binding periplasmic protein [Escherichia coli KTE91]
gi|432933420|ref|ZP_20133088.1| putrescine-binding periplasmic protein [Escherichia coli KTE184]
gi|432966952|ref|ZP_20155868.1| putrescine-binding periplasmic protein [Escherichia coli KTE203]
gi|433192847|ref|ZP_20376859.1| putrescine-binding periplasmic protein [Escherichia coli KTE90]
gi|218360208|emb|CAQ97758.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli IAI1]
gi|384470184|gb|EIE54305.1| bacterial extracellular solute-binding protein [Escherichia coli
AI27]
gi|386153984|gb|EIH05265.1| putrescine-binding periplasmic protein [Escherichia coli 5.0588]
gi|388413096|gb|EIL73112.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli CUMT8]
gi|431298626|gb|ELF88250.1| putrescine-binding periplasmic protein [Escherichia coli KTE29]
gi|431356593|gb|ELG43283.1| putrescine-binding periplasmic protein [Escherichia coli KTE91]
gi|431455062|gb|ELH35418.1| putrescine-binding periplasmic protein [Escherichia coli KTE184]
gi|431472924|gb|ELH52758.1| putrescine-binding periplasmic protein [Escherichia coli KTE203]
gi|431720070|gb|ELJ84105.1| putrescine-binding periplasmic protein [Escherichia coli KTE90]
Length = 370
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 74/166 (44%), Gaps = 31/166 (18%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQ---NHNLAPIEDWKDPWWPELAGR-----ISMVN 279
DP K +A PY W T IGY K + N AP++ W PE + +S ++
Sbjct: 124 DPDNK-FAMPYMWATTGIGYNVDKVKAVLGEN-APVDSWDLILKPENLEKLKSCGVSFLD 181
Query: 280 SPREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVA 324
+P EV A +L L L +R F S+ Y+ GD+ VA
Sbjct: 182 APEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVA 241
Query: 325 VGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
+GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 242 IGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|161503961|ref|YP_001571073.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. arizonae
serovar 62:z4,z23:- str. RSK2980]
gi|160865308|gb|ABX21931.1| hypothetical protein SARI_02053 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:-]
Length = 371
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 71/165 (43%), Gaps = 29/165 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP K +A PY W T IGY K + + AP+ W PE + +S +++
Sbjct: 125 DPDNK-YAMPYMWATTGIGYNVDKVKAVLGDDAPVNSWDLVLKPENLEKLKSCGVSFLDA 183
Query: 281 PREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAV 325
P E+ A +L L L +R F S+ Y+ GD VA+
Sbjct: 184 PEEIFATVLNYLGKDPNSSKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDTCVAI 243
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
GW+ DV A R N++ +PK GA + D++A+PA R
Sbjct: 244 GWAGDVWQAANRAKEAKNGVNISFSIPKEGAMAFFDVFAMPADGR 288
>gi|432579551|ref|ZP_19815982.1| putrescine-binding periplasmic protein [Escherichia coli KTE56]
gi|431107541|gb|ELE11706.1| putrescine-binding periplasmic protein [Escherichia coli KTE56]
Length = 370
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 73/165 (44%), Gaps = 29/165 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP K +A PY W T IGY K + AP++ W PE + +S +++
Sbjct: 124 DPDNK-FAMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDA 182
Query: 281 PREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAV 325
P EV A +L L L +R F S+ Y+ GD+ VA+
Sbjct: 183 PEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 242
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 243 GWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|411011631|ref|ZP_11387960.1| spermidine/putrescine ABC transporter periplasmic
spermidine/putrescine-binding protein [Aeromonas
aquariorum AAK1]
gi|423198744|ref|ZP_17185327.1| hypothetical protein HMPREF1171_03359 [Aeromonas hydrophila SSU]
gi|404629934|gb|EKB26659.1| hypothetical protein HMPREF1171_03359 [Aeromonas hydrophila SSU]
Length = 359
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 72/162 (44%), Gaps = 27/162 (16%)
Query: 226 EIDPRGKIWAAPYRWGTMAIGYKKSKFQN-HNLAPIEDWKDPWWPELAGRIS-----MVN 279
++DP G +A PY WGT IGY K + + I+ W + PE ++S ++
Sbjct: 113 KVDP-GHQYAVPYLWGTNGIGYNVEKVKAVLGVDKIDSWATIFEPENMKKLSHCGVAFLD 171
Query: 280 SPREVIVAGGKIA--------------VQQNLALLANQVRLFDSTHYLKAFGIGDVWVAV 325
S E+I A ++ L + V F S+ Y+ G++ VA
Sbjct: 172 SADEMIPAALNYLGLDPNSHEPADLKRAEEQLLKVRPYVAYFHSSKYIGDLANGNICVAA 231
Query: 326 GWSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIPA 361
G+S D+L A R +A +PK G +LW D+ AIPA
Sbjct: 232 GFSGDILQAAARAEEAGKGIKIAYSIPKEGGNLWFDMMAIPA 273
>gi|365848786|ref|ZP_09389257.1| putrescine-binding periplasmic protein [Yokenella regensburgei ATCC
43003]
gi|364569430|gb|EHM47052.1| putrescine-binding periplasmic protein [Yokenella regensburgei ATCC
43003]
Length = 370
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 88/217 (40%), Gaps = 36/217 (16%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP K +A PY W T IGY K + AP+ W PE + +S +++
Sbjct: 124 DPDNK-YAMPYMWATTGIGYNVDKVKAVLGKDAPVNSWDLILKPENLEKLKSCGVSFLDA 182
Query: 281 PREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAV 325
P EV A +L L L +R F S+ Y+ GD+ VA+
Sbjct: 183 PEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 242
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIP--AASRLETKQIGGQVRGP 377
GW+ DV A R N++ +PK GA + D++A+P A ++ E Q + P
Sbjct: 243 GWAGDVWQAANRAKEAKNGVNISYSIPKEGALAFFDVFAMPADAKNKDEAYQFLNYLLRP 302
Query: 378 SPLIH--QWIEFCLQTARALPFKQEVI---PGASPSA 409
+ H + + A P E + PG P A
Sbjct: 303 DVIAHISDHVFYANVNKAATPLVSEAVRDNPGIYPPA 339
>gi|315644532|ref|ZP_07897664.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Paenibacillus
vortex V453]
gi|315280039|gb|EFU43336.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Paenibacillus
vortex V453]
Length = 350
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 91/214 (42%), Gaps = 30/214 (14%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVIVA 287
DP G ++ Y G I Y K + + I+ W D W PE G++ +++ RE+I
Sbjct: 123 DP-GNKYSIVYTSGVTGIAYNKK----YVIDEIKSWGDLWNPEYKGKVLLLDDNREMIGM 177
Query: 288 GGK--------------IAVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLP 333
K IA L L V FD+ + + + W+A WS D
Sbjct: 178 ALKKQGKSNSSKDEAEIIAASDELKTLLPNVLAFDTDNIKQKMIQEEGWIATVWSGDAAF 237
Query: 334 AVKRMSNVAVVVPKSGASLWADLWAIPAASR---LETKQIGGQVR-GPSPLIHQWIEFCL 389
+VA VVP+ GA++++D +AIP ++ L K I + S +++I +
Sbjct: 238 IAAENPDVAYVVPEEGATIFSDNYAIPKGAKNKELAEKFINFMLEPEVSAKNYEFIGYSN 297
Query: 390 QTARALPFKQEVIPGASPSALESTLVKLPEELLK 423
+A+ F E +T++ L EE L+
Sbjct: 298 PNTKAMEFHSEEYRA-------NTMINLTEEELR 324
>gi|193064481|ref|ZP_03045562.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli E22]
gi|260843105|ref|YP_003220883.1| putrescine transporter subunit PotF [Escherichia coli O103:H2 str.
12009]
gi|417177493|ref|ZP_12006974.1| putrescine-binding periplasmic protein [Escherichia coli 3.2608]
gi|417180250|ref|ZP_12007958.1| putrescine-binding periplasmic protein [Escherichia coli 93.0624]
gi|192928943|gb|EDV82556.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli E22]
gi|257758252|dbj|BAI29749.1| putrescine transporter subunit PotF [Escherichia coli O103:H2 str.
12009]
gi|386176042|gb|EIH53524.1| putrescine-binding periplasmic protein [Escherichia coli 3.2608]
gi|386185605|gb|EIH68331.1| putrescine-binding periplasmic protein [Escherichia coli 93.0624]
Length = 370
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 73/165 (44%), Gaps = 29/165 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP K +A PY W T IGY K + AP++ W PE + +S +++
Sbjct: 124 DPDNK-FAMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDA 182
Query: 281 PREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAV 325
P EV A +L L L +R F S+ Y+ GD+ VA+
Sbjct: 183 PEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 242
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 243 GWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|418254221|ref|ZP_12879118.1| potF [Shigella flexneri 6603-63]
gi|397900578|gb|EJL16937.1| potF [Shigella flexneri 6603-63]
Length = 370
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 73/165 (44%), Gaps = 29/165 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP K +A PY W T IGY K + AP++ W PE + +S +++
Sbjct: 124 DPDNK-FAMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDA 182
Query: 281 PREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAV 325
P EV A +L L L +R F S+ Y+ GD+ VA+
Sbjct: 183 PEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 242
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 243 GWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|423099912|ref|ZP_17087619.1| ABC transporter, solute-binding protein [Listeria innocua ATCC
33091]
gi|370793645|gb|EHN61478.1| ABC transporter, solute-binding protein [Listeria innocua ATCC
33091]
Length = 357
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 91/203 (44%), Gaps = 34/203 (16%)
Query: 234 WAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVIVAG----G 289
++ PY WGT+ I Y K F + N + W + PEL +I +++ REV+ G G
Sbjct: 132 YSMPYFWGTLGIIYNKEMFPDKNF---DTWNALFDPELKNQILLIDGAREVMGLGLNSLG 188
Query: 290 KIAVQQNLA-LLANQVRLFDSTHYLKAFGIGD----------VWVAVGWSSDVLPAVKRM 338
N A L A + +L T +KA +GD VAV +S + +
Sbjct: 189 YSLNDTNKAHLQAARDKLETMTPNVKAI-VGDEIKLLMADNEAGVAVTFSGEAAEMLSEN 247
Query: 339 SNVAVVVPKSGASLWADLWAIPAASRLETKQIGGQVRGPSPLIHQWIEFCLQTARALPFK 398
++ V+PK G++LW D IP + K I G H++I F L+ A
Sbjct: 248 EDLEYVIPKDGSNLWFDNMVIPKTA----KNIDGA--------HKFINFMLKPENA-AIN 294
Query: 399 QEVIPGASPSALESTLVKLPEEL 421
E + A+P+ E + LP+E+
Sbjct: 295 AEYVGYATPN--EKAVKLLPKEI 315
>gi|417601190|ref|ZP_12251772.1| putrescine-binding periplasmic protein [Escherichia coli STEC_94C]
gi|345353196|gb|EGW85432.1| putrescine-binding periplasmic protein [Escherichia coli STEC_94C]
Length = 370
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 73/165 (44%), Gaps = 29/165 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP K +A PY W T IGY K + AP++ W PE + +S +++
Sbjct: 124 DPDNK-FAMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDA 182
Query: 281 PREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAV 325
P EV A +L L L +R F S+ Y+ GD+ VA+
Sbjct: 183 PEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 242
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 243 GWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|15800606|ref|NP_286620.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
coli O157:H7 str. EDL933]
gi|15830188|ref|NP_308961.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
coli O157:H7 str. Sakai]
gi|168750039|ref|ZP_02775061.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli O157:H7 str. EC4113]
gi|168756649|ref|ZP_02781656.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli O157:H7 str. EC4401]
gi|168763295|ref|ZP_02788302.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli O157:H7 str. EC4501]
gi|168767365|ref|ZP_02792372.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli O157:H7 str. EC4486]
gi|168776396|ref|ZP_02801403.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli O157:H7 str. EC4196]
gi|168779407|ref|ZP_02804414.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli O157:H7 str. EC4076]
gi|168787076|ref|ZP_02812083.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli O157:H7 str. EC869]
gi|168799863|ref|ZP_02824870.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli O157:H7 str. EC508]
gi|195936899|ref|ZP_03082281.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O157:H7 str. EC4024]
gi|208806865|ref|ZP_03249202.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli O157:H7 str. EC4206]
gi|208816015|ref|ZP_03257194.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli O157:H7 str. EC4045]
gi|208822677|ref|ZP_03262996.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli O157:H7 str. EC4042]
gi|209397481|ref|YP_002269524.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
coli O157:H7 str. EC4115]
gi|217326518|ref|ZP_03442602.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli O157:H7 str. TW14588]
gi|254792050|ref|YP_003076887.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
coli O157:H7 str. TW14359]
gi|261225504|ref|ZP_05939785.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily protein [Escherichia coli O157:H7 str.
FRIK2000]
gi|261258527|ref|ZP_05951060.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily protein [Escherichia coli O157:H7 str.
FRIK966]
gi|387505963|ref|YP_006158219.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
coli O55:H7 str. RM12579]
gi|387881465|ref|YP_006311767.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
coli Xuzhou21]
gi|416309490|ref|ZP_11655862.1| Putrescine ABC transporter putrescine-binding protein PotF
[Escherichia coli O157:H7 str. 1044]
gi|416317369|ref|ZP_11660410.1| Putrescine ABC transporter putrescine-binding protein PotF
[Escherichia coli O157:H7 str. EC1212]
gi|416332128|ref|ZP_11670207.1| Putrescine ABC transporter putrescine-binding protein PotF
[Escherichia coli O157:H7 str. 1125]
gi|416781959|ref|ZP_11877428.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O157:H7 str. G5101]
gi|416793190|ref|ZP_11882351.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O157:H- str. 493-89]
gi|416804456|ref|ZP_11887211.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O157:H- str. H 2687]
gi|416815481|ref|ZP_11891917.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O55:H7 str. 3256-97]
gi|416825314|ref|ZP_11896502.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O55:H7 str. USDA 5905]
gi|416836159|ref|ZP_11901774.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O157:H7 str. LSU-61]
gi|419043994|ref|ZP_13590965.1| potF [Escherichia coli DEC3A]
gi|419049501|ref|ZP_13596417.1| potF [Escherichia coli DEC3B]
gi|419055582|ref|ZP_13602435.1| potF [Escherichia coli DEC3C]
gi|419061154|ref|ZP_13607933.1| potF [Escherichia coli DEC3D]
gi|419067252|ref|ZP_13613727.1| potF [Escherichia coli DEC3E]
gi|419074036|ref|ZP_13619604.1| potF [Escherichia coli DEC3F]
gi|419079265|ref|ZP_13624747.1| potF [Escherichia coli DEC4A]
gi|419084900|ref|ZP_13630309.1| potF [Escherichia coli DEC4B]
gi|419090906|ref|ZP_13636223.1| potF [Escherichia coli DEC4C]
gi|419096798|ref|ZP_13642040.1| potF [Escherichia coli DEC4D]
gi|419102640|ref|ZP_13647805.1| potF [Escherichia coli DEC4E]
gi|419108002|ref|ZP_13653111.1| potF [Escherichia coli DEC4F]
gi|419113771|ref|ZP_13658801.1| potF [Escherichia coli DEC5A]
gi|419119409|ref|ZP_13664387.1| potF [Escherichia coli DEC5B]
gi|419125105|ref|ZP_13670002.1| potF [Escherichia coli DEC5C]
gi|419130657|ref|ZP_13675504.1| potF [Escherichia coli DEC5D]
gi|419135384|ref|ZP_13680190.1| putrescine-binding periplasmic protein [Escherichia coli DEC5E]
gi|420268190|ref|ZP_14770594.1| putrescine-binding periplasmic protein [Escherichia coli PA22]
gi|420273938|ref|ZP_14776270.1| putrescine-binding periplasmic protein [Escherichia coli PA40]
gi|420279166|ref|ZP_14781431.1| putrescine-binding periplasmic protein [Escherichia coli TW06591]
gi|420285277|ref|ZP_14787492.1| putrescine-binding periplasmic protein [Escherichia coli TW10246]
gi|420291047|ref|ZP_14793210.1| putrescine-binding periplasmic protein [Escherichia coli TW11039]
gi|420296647|ref|ZP_14798740.1| putrescine-binding periplasmic protein [Escherichia coli TW09109]
gi|420302899|ref|ZP_14804925.1| putrescine-binding periplasmic protein [Escherichia coli TW10119]
gi|420308123|ref|ZP_14810095.1| putrescine-binding periplasmic protein [Escherichia coli EC1738]
gi|420313944|ref|ZP_14815849.1| putrescine-binding periplasmic protein [Escherichia coli EC1734]
gi|421811129|ref|ZP_16246928.1| bacterial extracellular solute-binding protein [Escherichia coli
8.0416]
gi|421817210|ref|ZP_16252765.1| putrescine-binding periplasmic protein [Escherichia coli 10.0821]
gi|421822614|ref|ZP_16258051.1| putrescine-binding periplasmic protein [Escherichia coli FRIK920]
gi|421829352|ref|ZP_16264679.1| putrescine-binding periplasmic protein [Escherichia coli PA7]
gi|423664786|ref|ZP_17639948.1| putrescine-binding periplasmic protein [Escherichia coli PA31]
gi|424075800|ref|ZP_17813140.1| putrescine-binding periplasmic protein [Escherichia coli FDA505]
gi|424082129|ref|ZP_17818980.1| putrescine-binding periplasmic protein [Escherichia coli FDA517]
gi|424088762|ref|ZP_17825008.1| putrescine-binding periplasmic protein [Escherichia coli FRIK1996]
gi|424094974|ref|ZP_17830719.1| putrescine-binding periplasmic protein [Escherichia coli FRIK1985]
gi|424101395|ref|ZP_17836540.1| putrescine-binding periplasmic protein [Escherichia coli FRIK1990]
gi|424108193|ref|ZP_17842759.1| putrescine-binding periplasmic protein [Escherichia coli 93-001]
gi|424114185|ref|ZP_17848321.1| putrescine-binding periplasmic protein [Escherichia coli PA3]
gi|424120244|ref|ZP_17853937.1| putrescine-binding periplasmic protein [Escherichia coli PA5]
gi|424126484|ref|ZP_17859679.1| putrescine-binding periplasmic protein [Escherichia coli PA9]
gi|424132590|ref|ZP_17865381.1| putrescine-binding periplasmic protein [Escherichia coli PA10]
gi|424139133|ref|ZP_17871418.1| putrescine-binding periplasmic protein [Escherichia coli PA14]
gi|424145574|ref|ZP_17877334.1| putrescine-binding periplasmic protein [Escherichia coli PA15]
gi|424151707|ref|ZP_17882953.1| putrescine-binding periplasmic protein [Escherichia coli PA24]
gi|424190199|ref|ZP_17888392.1| putrescine-binding periplasmic protein [Escherichia coli PA25]
gi|424271769|ref|ZP_17894300.1| putrescine-binding periplasmic protein [Escherichia coli PA28]
gi|424425517|ref|ZP_17900023.1| putrescine-binding periplasmic protein [Escherichia coli PA32]
gi|424454119|ref|ZP_17905645.1| putrescine-binding periplasmic protein [Escherichia coli PA33]
gi|424460434|ref|ZP_17911345.1| putrescine-binding periplasmic protein [Escherichia coli PA39]
gi|424466903|ref|ZP_17917082.1| putrescine-binding periplasmic protein [Escherichia coli PA41]
gi|424473467|ref|ZP_17923127.1| putrescine-binding periplasmic protein [Escherichia coli PA42]
gi|424479398|ref|ZP_17928637.1| putrescine-binding periplasmic protein [Escherichia coli TW07945]
gi|424485468|ref|ZP_17934323.1| putrescine-binding periplasmic protein [Escherichia coli TW09098]
gi|424491650|ref|ZP_17939985.1| putrescine-binding periplasmic protein [Escherichia coli TW09195]
gi|424498687|ref|ZP_17945949.1| putrescine-binding periplasmic protein [Escherichia coli EC4203]
gi|424504922|ref|ZP_17951683.1| putrescine-binding periplasmic protein [Escherichia coli EC4196]
gi|424511172|ref|ZP_17957385.1| putrescine-binding periplasmic protein [Escherichia coli TW14313]
gi|424518707|ref|ZP_17963131.1| putrescine-binding periplasmic protein [Escherichia coli TW14301]
gi|424524565|ref|ZP_17968579.1| putrescine-binding periplasmic protein [Escherichia coli EC4421]
gi|424530770|ref|ZP_17974385.1| putrescine-binding periplasmic protein [Escherichia coli EC4422]
gi|424536747|ref|ZP_17979997.1| putrescine-binding periplasmic protein [Escherichia coli EC4013]
gi|424542666|ref|ZP_17985464.1| putrescine-binding periplasmic protein [Escherichia coli EC4402]
gi|424548983|ref|ZP_17991173.1| putrescine-binding periplasmic protein [Escherichia coli EC4439]
gi|424555230|ref|ZP_17996943.1| putrescine-binding periplasmic protein [Escherichia coli EC4436]
gi|424561586|ref|ZP_18002866.1| putrescine-binding periplasmic protein [Escherichia coli EC4437]
gi|424567616|ref|ZP_18008520.1| putrescine-binding periplasmic protein [Escherichia coli EC4448]
gi|424573808|ref|ZP_18014218.1| putrescine-binding periplasmic protein [Escherichia coli EC1845]
gi|424579757|ref|ZP_18019678.1| putrescine-binding periplasmic protein [Escherichia coli EC1863]
gi|425096428|ref|ZP_18499441.1| putrescine-binding periplasmic protein [Escherichia coli 3.4870]
gi|425102572|ref|ZP_18505212.1| putrescine-binding periplasmic protein [Escherichia coli 5.2239]
gi|425108377|ref|ZP_18510615.1| bacterial extracellular solute-binding protein [Escherichia coli
6.0172]
gi|425124212|ref|ZP_18525770.1| putrescine-binding periplasmic protein [Escherichia coli 8.0586]
gi|425130241|ref|ZP_18531330.1| putrescine-binding periplasmic protein [Escherichia coli 8.2524]
gi|425136608|ref|ZP_18537322.1| bacterial extracellular solute-binding protein [Escherichia coli
10.0833]
gi|425142447|ref|ZP_18542734.1| putrescine-binding periplasmic protein [Escherichia coli 10.0869]
gi|425148796|ref|ZP_18548673.1| putrescine-binding periplasmic protein [Escherichia coli 88.0221]
gi|425154400|ref|ZP_18553942.1| putrescine-binding periplasmic protein [Escherichia coli PA34]
gi|425160846|ref|ZP_18560017.1| putrescine-binding periplasmic protein [Escherichia coli FDA506]
gi|425166374|ref|ZP_18565175.1| putrescine-binding periplasmic protein [Escherichia coli FDA507]
gi|425172659|ref|ZP_18571048.1| putrescine-binding periplasmic protein [Escherichia coli FDA504]
gi|425178551|ref|ZP_18576593.1| putrescine-binding periplasmic protein [Escherichia coli FRIK1999]
gi|425184697|ref|ZP_18582311.1| putrescine-binding periplasmic protein [Escherichia coli FRIK1997]
gi|425191456|ref|ZP_18588572.1| putrescine-binding periplasmic protein [Escherichia coli NE1487]
gi|425197765|ref|ZP_18594407.1| putrescine-binding periplasmic protein [Escherichia coli NE037]
gi|425204431|ref|ZP_18600551.1| putrescine-binding periplasmic protein [Escherichia coli FRIK2001]
gi|425210183|ref|ZP_18605909.1| bacterial extracellular solute-binding protein [Escherichia coli
PA4]
gi|425216236|ref|ZP_18611541.1| putrescine-binding periplasmic protein [Escherichia coli PA23]
gi|425222818|ref|ZP_18617660.1| putrescine-binding periplasmic protein [Escherichia coli PA49]
gi|425229043|ref|ZP_18623426.1| putrescine-binding periplasmic protein [Escherichia coli PA45]
gi|425235348|ref|ZP_18629302.1| putrescine-binding periplasmic protein [Escherichia coli TT12B]
gi|425241345|ref|ZP_18634973.1| putrescine-binding periplasmic protein [Escherichia coli MA6]
gi|425247471|ref|ZP_18640666.1| putrescine-binding periplasmic protein [Escherichia coli 5905]
gi|425253208|ref|ZP_18646067.1| putrescine-binding periplasmic protein [Escherichia coli CB7326]
gi|425259483|ref|ZP_18651842.1| putrescine-binding periplasmic protein [Escherichia coli EC96038]
gi|425265629|ref|ZP_18657530.1| putrescine-binding periplasmic protein [Escherichia coli 5412]
gi|425293065|ref|ZP_18683633.1| putrescine-binding periplasmic protein [Escherichia coli PA38]
gi|425309798|ref|ZP_18699252.1| putrescine-binding periplasmic protein [Escherichia coli EC1735]
gi|425315720|ref|ZP_18704783.1| putrescine-binding periplasmic protein [Escherichia coli EC1736]
gi|425321786|ref|ZP_18710444.1| putrescine-binding periplasmic protein [Escherichia coli EC1737]
gi|425327978|ref|ZP_18716184.1| putrescine-binding periplasmic protein [Escherichia coli EC1846]
gi|425334164|ref|ZP_18721866.1| putrescine-binding periplasmic protein [Escherichia coli EC1847]
gi|425340576|ref|ZP_18727801.1| putrescine-binding periplasmic protein [Escherichia coli EC1848]
gi|425346443|ref|ZP_18733234.1| putrescine-binding periplasmic protein [Escherichia coli EC1849]
gi|425352679|ref|ZP_18739043.1| putrescine-binding periplasmic protein [Escherichia coli EC1850]
gi|425358668|ref|ZP_18744625.1| putrescine-binding periplasmic protein [Escherichia coli EC1856]
gi|425364782|ref|ZP_18750308.1| putrescine-binding periplasmic protein [Escherichia coli EC1862]
gi|425371229|ref|ZP_18756175.1| putrescine-binding periplasmic protein [Escherichia coli EC1864]
gi|425384022|ref|ZP_18767885.1| putrescine-binding periplasmic protein [Escherichia coli EC1866]
gi|425390712|ref|ZP_18774152.1| putrescine-binding periplasmic protein [Escherichia coli EC1868]
gi|425396831|ref|ZP_18779860.1| putrescine-binding periplasmic protein [Escherichia coli EC1869]
gi|425402818|ref|ZP_18785409.1| putrescine-binding periplasmic protein [Escherichia coli EC1870]
gi|425409356|ref|ZP_18791494.1| putrescine-binding periplasmic protein [Escherichia coli NE098]
gi|425415637|ref|ZP_18797257.1| putrescine-binding periplasmic protein [Escherichia coli FRIK523]
gi|425426770|ref|ZP_18807809.1| putrescine-binding periplasmic protein [Escherichia coli 0.1304]
gi|428945467|ref|ZP_19018081.1| putrescine-binding periplasmic protein [Escherichia coli 88.1467]
gi|428951601|ref|ZP_19023707.1| putrescine-binding periplasmic protein [Escherichia coli 88.1042]
gi|428957463|ref|ZP_19029130.1| putrescine-binding periplasmic protein [Escherichia coli 89.0511]
gi|428963788|ref|ZP_19034949.1| putrescine-binding periplasmic protein [Escherichia coli 90.0091]
gi|428970085|ref|ZP_19040698.1| putrescine-binding periplasmic protein [Escherichia coli 90.0039]
gi|428976320|ref|ZP_19046474.1| putrescine-binding periplasmic protein [Escherichia coli 90.2281]
gi|428982164|ref|ZP_19051881.1| putrescine-binding periplasmic protein [Escherichia coli 93.0055]
gi|428988392|ref|ZP_19057659.1| putrescine-binding periplasmic protein [Escherichia coli 93.0056]
gi|428994192|ref|ZP_19063083.1| putrescine-binding periplasmic protein [Escherichia coli 94.0618]
gi|429000330|ref|ZP_19068816.1| putrescine-binding periplasmic protein [Escherichia coli 95.0183]
gi|429006513|ref|ZP_19074403.1| putrescine-binding periplasmic protein [Escherichia coli 95.1288]
gi|429012847|ref|ZP_19080084.1| putrescine-binding periplasmic protein [Escherichia coli 95.0943]
gi|429019033|ref|ZP_19085798.1| putrescine-binding periplasmic protein [Escherichia coli 96.0428]
gi|429024771|ref|ZP_19091161.1| putrescine-binding periplasmic protein [Escherichia coli 96.0427]
gi|429031104|ref|ZP_19096955.1| putrescine-binding periplasmic protein [Escherichia coli 96.0939]
gi|429037257|ref|ZP_19102681.1| putrescine-binding periplasmic protein [Escherichia coli 96.0932]
gi|429043208|ref|ZP_19108188.1| putrescine-binding periplasmic protein [Escherichia coli 96.0107]
gi|429054348|ref|ZP_19118821.1| putrescine-binding periplasmic protein [Escherichia coli 97.1742]
gi|429059993|ref|ZP_19124125.1| putrescine-binding periplasmic protein [Escherichia coli 97.0007]
gi|429065501|ref|ZP_19129341.1| putrescine-binding periplasmic protein [Escherichia coli 99.0672]
gi|429072024|ref|ZP_19135370.1| bacterial extracellular solute-binding protein [Escherichia coli
99.0678]
gi|429077351|ref|ZP_19140559.1| putrescine-binding periplasmic protein [Escherichia coli 99.0713]
gi|429824593|ref|ZP_19356063.1| putrescine-binding periplasmic protein [Escherichia coli 96.0109]
gi|429830949|ref|ZP_19361762.1| putrescine-binding periplasmic protein [Escherichia coli 97.0010]
gi|444923286|ref|ZP_21242964.1| putrescine-binding periplasmic protein [Escherichia coli
09BKT078844]
gi|444929588|ref|ZP_21248728.1| putrescine-binding periplasmic protein [Escherichia coli 99.0814]
gi|444934879|ref|ZP_21253805.1| putrescine-binding periplasmic protein [Escherichia coli 99.0815]
gi|444940477|ref|ZP_21259112.1| putrescine-binding periplasmic protein [Escherichia coli 99.0816]
gi|444945996|ref|ZP_21264407.1| putrescine-binding periplasmic protein [Escherichia coli 99.0839]
gi|444951622|ref|ZP_21269834.1| putrescine-binding periplasmic protein [Escherichia coli 99.0848]
gi|444957096|ref|ZP_21275083.1| putrescine-binding periplasmic protein [Escherichia coli 99.1753]
gi|444962346|ref|ZP_21280084.1| putrescine-binding periplasmic protein [Escherichia coli 99.1775]
gi|444968098|ref|ZP_21285564.1| putrescine-binding periplasmic protein [Escherichia coli 99.1793]
gi|444973600|ref|ZP_21290868.1| putrescine-binding periplasmic protein [Escherichia coli 99.1805]
gi|444979146|ref|ZP_21296131.1| putrescine-binding periplasmic protein [Escherichia coli ATCC
700728]
gi|444984435|ref|ZP_21301295.1| putrescine-binding periplasmic protein [Escherichia coli PA11]
gi|444989680|ref|ZP_21306411.1| putrescine-binding periplasmic protein [Escherichia coli PA19]
gi|444995028|ref|ZP_21311616.1| putrescine-binding periplasmic protein [Escherichia coli PA13]
gi|445000539|ref|ZP_21316993.1| putrescine-binding periplasmic protein [Escherichia coli PA2]
gi|445005998|ref|ZP_21322328.1| putrescine-binding periplasmic protein [Escherichia coli PA47]
gi|445011109|ref|ZP_21327293.1| putrescine-binding periplasmic protein [Escherichia coli PA48]
gi|445016943|ref|ZP_21332985.1| putrescine-binding periplasmic protein [Escherichia coli PA8]
gi|445022379|ref|ZP_21338293.1| putrescine-binding periplasmic protein [Escherichia coli 7.1982]
gi|445027636|ref|ZP_21343404.1| putrescine-binding periplasmic protein [Escherichia coli 99.1781]
gi|445033139|ref|ZP_21348751.1| putrescine-binding periplasmic protein [Escherichia coli 99.1762]
gi|445038828|ref|ZP_21354290.1| putrescine-binding periplasmic protein [Escherichia coli PA35]
gi|445044128|ref|ZP_21359455.1| putrescine-binding periplasmic protein [Escherichia coli 3.4880]
gi|445049620|ref|ZP_21364776.1| putrescine-binding periplasmic protein [Escherichia coli 95.0083]
gi|445055272|ref|ZP_21370213.1| putrescine-binding periplasmic protein [Escherichia coli 99.0670]
gi|12513869|gb|AAG55230.1|AE005266_9 periplasmic putrescine-binding protein; permease protein
[Escherichia coli O157:H7 str. EDL933]
gi|13360393|dbj|BAB34357.1| periplasmic putrescine-binding permease protein [Escherichia coli
O157:H7 str. Sakai]
gi|187768225|gb|EDU32069.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli O157:H7 str. EC4196]
gi|188015747|gb|EDU53869.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli O157:H7 str. EC4113]
gi|189002793|gb|EDU71779.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli O157:H7 str. EC4076]
gi|189356266|gb|EDU74685.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli O157:H7 str. EC4401]
gi|189363385|gb|EDU81804.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli O157:H7 str. EC4486]
gi|189366515|gb|EDU84931.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli O157:H7 str. EC4501]
gi|189372977|gb|EDU91393.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli O157:H7 str. EC869]
gi|189377706|gb|EDU96122.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli O157:H7 str. EC508]
gi|208726666|gb|EDZ76267.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli O157:H7 str. EC4206]
gi|208732663|gb|EDZ81351.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli O157:H7 str. EC4045]
gi|208738162|gb|EDZ85845.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli O157:H7 str. EC4042]
gi|209158881|gb|ACI36314.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli O157:H7 str. EC4115]
gi|209775388|gb|ACI86006.1| periplasmic putrescine-binding permease protein [Escherichia coli]
gi|209775390|gb|ACI86007.1| periplasmic putrescine-binding permease protein [Escherichia coli]
gi|209775392|gb|ACI86008.1| periplasmic putrescine-binding permease protein [Escherichia coli]
gi|209775394|gb|ACI86009.1| periplasmic putrescine-binding permease protein [Escherichia coli]
gi|209775396|gb|ACI86010.1| periplasmic putrescine-binding permease protein [Escherichia coli]
gi|217322739|gb|EEC31163.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli O157:H7 str. TW14588]
gi|254591450|gb|ACT70811.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O157:H7 str. TW14359]
gi|320192665|gb|EFW67306.1| Putrescine ABC transporter putrescine-binding protein PotF
[Escherichia coli O157:H7 str. EC1212]
gi|320637720|gb|EFX07512.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O157:H7 str. G5101]
gi|320642844|gb|EFX12045.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O157:H- str. 493-89]
gi|320648301|gb|EFX16956.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O157:H- str. H 2687]
gi|320654138|gb|EFX22206.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O55:H7 str. 3256-97 TW
07815]
gi|320659762|gb|EFX27318.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O55:H7 str. USDA 5905]
gi|320664232|gb|EFX31383.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O157:H7 str. LSU-61]
gi|326338256|gb|EGD62085.1| Putrescine ABC transporter putrescine-binding protein PotF
[Escherichia coli O157:H7 str. 1125]
gi|326346233|gb|EGD69971.1| Putrescine ABC transporter putrescine-binding protein PotF
[Escherichia coli O157:H7 str. 1044]
gi|374357957|gb|AEZ39664.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O55:H7 str. RM12579]
gi|377899613|gb|EHU63959.1| potF [Escherichia coli DEC3A]
gi|377901563|gb|EHU65879.1| potF [Escherichia coli DEC3B]
gi|377913174|gb|EHU77318.1| potF [Escherichia coli DEC3C]
gi|377917240|gb|EHU81305.1| potF [Escherichia coli DEC3D]
gi|377919920|gb|EHU83954.1| potF [Escherichia coli DEC3E]
gi|377931012|gb|EHU94882.1| potF [Escherichia coli DEC3F]
gi|377933372|gb|EHU97217.1| potF [Escherichia coli DEC4A]
gi|377938272|gb|EHV02040.1| potF [Escherichia coli DEC4B]
gi|377949065|gb|EHV12705.1| potF [Escherichia coli DEC4C]
gi|377950236|gb|EHV13864.1| potF [Escherichia coli DEC4D]
gi|377953808|gb|EHV17372.1| potF [Escherichia coli DEC4E]
gi|377964471|gb|EHV27906.1| potF [Escherichia coli DEC5A]
gi|377966369|gb|EHV29781.1| potF [Escherichia coli DEC4F]
gi|377971052|gb|EHV34409.1| potF [Escherichia coli DEC5B]
gi|377979034|gb|EHV42312.1| potF [Escherichia coli DEC5C]
gi|377979228|gb|EHV42505.1| potF [Escherichia coli DEC5D]
gi|377986533|gb|EHV49723.1| putrescine-binding periplasmic protein [Escherichia coli DEC5E]
gi|386794923|gb|AFJ27957.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli Xuzhou21]
gi|390649846|gb|EIN28318.1| putrescine-binding periplasmic protein [Escherichia coli FRIK1996]
gi|390651735|gb|EIN30005.1| putrescine-binding periplasmic protein [Escherichia coli FDA517]
gi|390652334|gb|EIN30558.1| putrescine-binding periplasmic protein [Escherichia coli FDA505]
gi|390669119|gb|EIN45824.1| putrescine-binding periplasmic protein [Escherichia coli 93-001]
gi|390671954|gb|EIN48323.1| putrescine-binding periplasmic protein [Escherichia coli FRIK1990]
gi|390672408|gb|EIN48710.1| putrescine-binding periplasmic protein [Escherichia coli FRIK1985]
gi|390687857|gb|EIN63002.1| putrescine-binding periplasmic protein [Escherichia coli PA3]
gi|390690748|gb|EIN65534.1| putrescine-binding periplasmic protein [Escherichia coli PA9]
gi|390691427|gb|EIN66175.1| putrescine-binding periplasmic protein [Escherichia coli PA5]
gi|390707547|gb|EIN80891.1| putrescine-binding periplasmic protein [Escherichia coli PA10]
gi|390709358|gb|EIN82468.1| putrescine-binding periplasmic protein [Escherichia coli PA15]
gi|390710585|gb|EIN83603.1| putrescine-binding periplasmic protein [Escherichia coli PA14]
gi|390719497|gb|EIN92222.1| putrescine-binding periplasmic protein [Escherichia coli PA22]
gi|390732637|gb|EIO04322.1| putrescine-binding periplasmic protein [Escherichia coli PA25]
gi|390732735|gb|EIO04413.1| putrescine-binding periplasmic protein [Escherichia coli PA24]
gi|390735312|gb|EIO06706.1| putrescine-binding periplasmic protein [Escherichia coli PA28]
gi|390750969|gb|EIO20945.1| putrescine-binding periplasmic protein [Escherichia coli PA31]
gi|390751331|gb|EIO21246.1| putrescine-binding periplasmic protein [Escherichia coli PA32]
gi|390754208|gb|EIO23830.1| putrescine-binding periplasmic protein [Escherichia coli PA33]
gi|390762025|gb|EIO31295.1| putrescine-binding periplasmic protein [Escherichia coli PA40]
gi|390775337|gb|EIO43404.1| putrescine-binding periplasmic protein [Escherichia coli PA41]
gi|390776898|gb|EIO44777.1| putrescine-binding periplasmic protein [Escherichia coli PA42]
gi|390780850|gb|EIO48540.1| putrescine-binding periplasmic protein [Escherichia coli PA39]
gi|390784876|gb|EIO52432.1| putrescine-binding periplasmic protein [Escherichia coli TW06591]
gi|390794140|gb|EIO61439.1| putrescine-binding periplasmic protein [Escherichia coli TW10246]
gi|390801078|gb|EIO68144.1| putrescine-binding periplasmic protein [Escherichia coli TW11039]
gi|390808183|gb|EIO75029.1| putrescine-binding periplasmic protein [Escherichia coli TW07945]
gi|390811385|gb|EIO78099.1| putrescine-binding periplasmic protein [Escherichia coli TW09109]
gi|390818724|gb|EIO85093.1| putrescine-binding periplasmic protein [Escherichia coli TW10119]
gi|390821550|gb|EIO87733.1| putrescine-binding periplasmic protein [Escherichia coli TW09098]
gi|390836209|gb|EIP00762.1| putrescine-binding periplasmic protein [Escherichia coli EC4203]
gi|390838943|gb|EIP03120.1| putrescine-binding periplasmic protein [Escherichia coli EC4196]
gi|390839560|gb|EIP03661.1| putrescine-binding periplasmic protein [Escherichia coli TW09195]
gi|390854808|gb|EIP17585.1| putrescine-binding periplasmic protein [Escherichia coli TW14301]
gi|390857497|gb|EIP19925.1| putrescine-binding periplasmic protein [Escherichia coli TW14313]
gi|390857924|gb|EIP20345.1| putrescine-binding periplasmic protein [Escherichia coli EC4421]
gi|390870573|gb|EIP32074.1| putrescine-binding periplasmic protein [Escherichia coli EC4422]
gi|390875019|gb|EIP36101.1| putrescine-binding periplasmic protein [Escherichia coli EC4013]
gi|390884737|gb|EIP45010.1| putrescine-binding periplasmic protein [Escherichia coli EC4402]
gi|390887235|gb|EIP47221.1| putrescine-binding periplasmic protein [Escherichia coli EC4439]
gi|390893064|gb|EIP52632.1| putrescine-binding periplasmic protein [Escherichia coli EC4436]
gi|390903518|gb|EIP62564.1| putrescine-binding periplasmic protein [Escherichia coli EC1738]
gi|390908495|gb|EIP67318.1| putrescine-binding periplasmic protein [Escherichia coli EC4437]
gi|390911438|gb|EIP70143.1| putrescine-binding periplasmic protein [Escherichia coli EC1734]
gi|390913492|gb|EIP72078.1| putrescine-binding periplasmic protein [Escherichia coli EC4448]
gi|390924171|gb|EIP81973.1| putrescine-binding periplasmic protein [Escherichia coli EC1863]
gi|390925768|gb|EIP83401.1| putrescine-binding periplasmic protein [Escherichia coli EC1845]
gi|408071679|gb|EKH06014.1| putrescine-binding periplasmic protein [Escherichia coli PA7]
gi|408075796|gb|EKH10028.1| putrescine-binding periplasmic protein [Escherichia coli FRIK920]
gi|408085451|gb|EKH19075.1| putrescine-binding periplasmic protein [Escherichia coli PA34]
gi|408089287|gb|EKH22618.1| putrescine-binding periplasmic protein [Escherichia coli FDA506]
gi|408094081|gb|EKH27126.1| putrescine-binding periplasmic protein [Escherichia coli FDA507]
gi|408101117|gb|EKH33586.1| putrescine-binding periplasmic protein [Escherichia coli FDA504]
gi|408109370|gb|EKH41297.1| putrescine-binding periplasmic protein [Escherichia coli FRIK1999]
gi|408115823|gb|EKH47188.1| putrescine-binding periplasmic protein [Escherichia coli FRIK1997]
gi|408121136|gb|EKH52100.1| putrescine-binding periplasmic protein [Escherichia coli NE1487]
gi|408129305|gb|EKH59538.1| putrescine-binding periplasmic protein [Escherichia coli NE037]
gi|408131027|gb|EKH61088.1| putrescine-binding periplasmic protein [Escherichia coli FRIK2001]
gi|408140179|gb|EKH69714.1| bacterial extracellular solute-binding protein [Escherichia coli
PA4]
gi|408149503|gb|EKH78181.1| putrescine-binding periplasmic protein [Escherichia coli PA23]
gi|408151363|gb|EKH79871.1| putrescine-binding periplasmic protein [Escherichia coli PA49]
gi|408156509|gb|EKH84711.1| putrescine-binding periplasmic protein [Escherichia coli PA45]
gi|408166220|gb|EKH93838.1| putrescine-binding periplasmic protein [Escherichia coli TT12B]
gi|408170931|gb|EKH98081.1| putrescine-binding periplasmic protein [Escherichia coli MA6]
gi|408172925|gb|EKH99977.1| putrescine-binding periplasmic protein [Escherichia coli 5905]
gi|408186208|gb|EKI12315.1| putrescine-binding periplasmic protein [Escherichia coli CB7326]
gi|408190227|gb|EKI15898.1| putrescine-binding periplasmic protein [Escherichia coli 5412]
gi|408190518|gb|EKI16163.1| putrescine-binding periplasmic protein [Escherichia coli EC96038]
gi|408231932|gb|EKI55192.1| putrescine-binding periplasmic protein [Escherichia coli PA38]
gi|408237541|gb|EKI60396.1| putrescine-binding periplasmic protein [Escherichia coli EC1735]
gi|408248449|gb|EKI70498.1| putrescine-binding periplasmic protein [Escherichia coli EC1736]
gi|408252163|gb|EKI73860.1| putrescine-binding periplasmic protein [Escherichia coli EC1737]
gi|408258338|gb|EKI79612.1| putrescine-binding periplasmic protein [Escherichia coli EC1846]
gi|408267294|gb|EKI87758.1| putrescine-binding periplasmic protein [Escherichia coli EC1847]
gi|408268977|gb|EKI89299.1| putrescine-binding periplasmic protein [Escherichia coli EC1848]
gi|408278245|gb|EKI98007.1| putrescine-binding periplasmic protein [Escherichia coli EC1849]
gi|408284083|gb|EKJ03212.1| putrescine-binding periplasmic protein [Escherichia coli EC1850]
gi|408286693|gb|EKJ05612.1| putrescine-binding periplasmic protein [Escherichia coli EC1856]
gi|408299337|gb|EKJ17148.1| putrescine-binding periplasmic protein [Escherichia coli EC1862]
gi|408299613|gb|EKJ17384.1| putrescine-binding periplasmic protein [Escherichia coli EC1864]
gi|408315542|gb|EKJ31857.1| putrescine-binding periplasmic protein [Escherichia coli EC1868]
gi|408315977|gb|EKJ32275.1| putrescine-binding periplasmic protein [Escherichia coli EC1866]
gi|408330518|gb|EKJ45781.1| putrescine-binding periplasmic protein [Escherichia coli EC1869]
gi|408335392|gb|EKJ50238.1| putrescine-binding periplasmic protein [Escherichia coli NE098]
gi|408337053|gb|EKJ51799.1| putrescine-binding periplasmic protein [Escherichia coli EC1870]
gi|408349769|gb|EKJ63691.1| putrescine-binding periplasmic protein [Escherichia coli FRIK523]
gi|408352658|gb|EKJ66202.1| putrescine-binding periplasmic protein [Escherichia coli 0.1304]
gi|408557774|gb|EKK34197.1| putrescine-binding periplasmic protein [Escherichia coli 5.2239]
gi|408558042|gb|EKK34457.1| putrescine-binding periplasmic protein [Escherichia coli 3.4870]
gi|408558495|gb|EKK34859.1| bacterial extracellular solute-binding protein [Escherichia coli
6.0172]
gi|408584608|gb|EKK59608.1| putrescine-binding periplasmic protein [Escherichia coli 8.0586]
gi|408588631|gb|EKK63203.1| putrescine-binding periplasmic protein [Escherichia coli 8.2524]
gi|408589636|gb|EKK64138.1| bacterial extracellular solute-binding protein [Escherichia coli
10.0833]
gi|408603451|gb|EKK77092.1| putrescine-binding periplasmic protein [Escherichia coli 10.0869]
gi|408605201|gb|EKK78730.1| bacterial extracellular solute-binding protein [Escherichia coli
8.0416]
gi|408606704|gb|EKK80130.1| putrescine-binding periplasmic protein [Escherichia coli 88.0221]
gi|408616403|gb|EKK89558.1| putrescine-binding periplasmic protein [Escherichia coli 10.0821]
gi|427213627|gb|EKV83032.1| putrescine-binding periplasmic protein [Escherichia coli 88.1042]
gi|427215477|gb|EKV84659.1| putrescine-binding periplasmic protein [Escherichia coli 89.0511]
gi|427215607|gb|EKV84779.1| putrescine-binding periplasmic protein [Escherichia coli 88.1467]
gi|427232863|gb|EKW00662.1| putrescine-binding periplasmic protein [Escherichia coli 90.2281]
gi|427233218|gb|EKW01004.1| putrescine-binding periplasmic protein [Escherichia coli 90.0039]
gi|427234674|gb|EKW02351.1| putrescine-binding periplasmic protein [Escherichia coli 90.0091]
gi|427250446|gb|EKW17117.1| putrescine-binding periplasmic protein [Escherichia coli 93.0056]
gi|427252048|gb|EKW18570.1| putrescine-binding periplasmic protein [Escherichia coli 93.0055]
gi|427253304|gb|EKW19746.1| putrescine-binding periplasmic protein [Escherichia coli 94.0618]
gi|427269565|gb|EKW34522.1| putrescine-binding periplasmic protein [Escherichia coli 95.0183]
gi|427269724|gb|EKW34676.1| putrescine-binding periplasmic protein [Escherichia coli 95.0943]
gi|427274058|gb|EKW38723.1| putrescine-binding periplasmic protein [Escherichia coli 95.1288]
gi|427285691|gb|EKW49630.1| putrescine-binding periplasmic protein [Escherichia coli 96.0428]
gi|427291178|gb|EKW54622.1| putrescine-binding periplasmic protein [Escherichia coli 96.0427]
gi|427292734|gb|EKW56061.1| putrescine-binding periplasmic protein [Escherichia coli 96.0939]
gi|427305378|gb|EKW67973.1| putrescine-binding periplasmic protein [Escherichia coli 96.0932]
gi|427309436|gb|EKW71754.1| putrescine-binding periplasmic protein [Escherichia coli 96.0107]
gi|427320592|gb|EKW82347.1| putrescine-binding periplasmic protein [Escherichia coli 97.1742]
gi|427321409|gb|EKW83103.1| putrescine-binding periplasmic protein [Escherichia coli 97.0007]
gi|427333243|gb|EKW94353.1| putrescine-binding periplasmic protein [Escherichia coli 99.0713]
gi|427333455|gb|EKW94560.1| bacterial extracellular solute-binding protein [Escherichia coli
99.0678]
gi|427336396|gb|EKW97374.1| putrescine-binding periplasmic protein [Escherichia coli 99.0672]
gi|429259352|gb|EKY43049.1| putrescine-binding periplasmic protein [Escherichia coli 96.0109]
gi|429261409|gb|EKY44854.1| putrescine-binding periplasmic protein [Escherichia coli 97.0010]
gi|444541887|gb|ELV21323.1| putrescine-binding periplasmic protein [Escherichia coli 99.0814]
gi|444549449|gb|ELV27692.1| putrescine-binding periplasmic protein [Escherichia coli
09BKT078844]
gi|444551304|gb|ELV29275.1| putrescine-binding periplasmic protein [Escherichia coli 99.0815]
gi|444564170|gb|ELV41127.1| putrescine-binding periplasmic protein [Escherichia coli 99.0839]
gi|444566023|gb|ELV42861.1| putrescine-binding periplasmic protein [Escherichia coli 99.0816]
gi|444570228|gb|ELV46770.1| putrescine-binding periplasmic protein [Escherichia coli 99.0848]
gi|444581156|gb|ELV57024.1| putrescine-binding periplasmic protein [Escherichia coli 99.1753]
gi|444584205|gb|ELV59856.1| putrescine-binding periplasmic protein [Escherichia coli 99.1775]
gi|444585293|gb|ELV60871.1| putrescine-binding periplasmic protein [Escherichia coli 99.1793]
gi|444598736|gb|ELV73649.1| putrescine-binding periplasmic protein [Escherichia coli ATCC
700728]
gi|444599301|gb|ELV74191.1| putrescine-binding periplasmic protein [Escherichia coli PA11]
gi|444606929|gb|ELV81530.1| putrescine-binding periplasmic protein [Escherichia coli 99.1805]
gi|444613461|gb|ELV87720.1| putrescine-binding periplasmic protein [Escherichia coli PA19]
gi|444613578|gb|ELV87836.1| putrescine-binding periplasmic protein [Escherichia coli PA13]
gi|444621892|gb|ELV95860.1| putrescine-binding periplasmic protein [Escherichia coli PA2]
gi|444631250|gb|ELW04854.1| putrescine-binding periplasmic protein [Escherichia coli PA48]
gi|444631514|gb|ELW05112.1| putrescine-binding periplasmic protein [Escherichia coli PA47]
gi|444636282|gb|ELW09684.1| putrescine-binding periplasmic protein [Escherichia coli PA8]
gi|444646662|gb|ELW19664.1| putrescine-binding periplasmic protein [Escherichia coli 7.1982]
gi|444649330|gb|ELW22231.1| putrescine-binding periplasmic protein [Escherichia coli 99.1781]
gi|444652302|gb|ELW25065.1| putrescine-binding periplasmic protein [Escherichia coli 99.1762]
gi|444661777|gb|ELW34065.1| putrescine-binding periplasmic protein [Escherichia coli PA35]
gi|444665940|gb|ELW38034.1| putrescine-binding periplasmic protein [Escherichia coli 3.4880]
gi|444672019|gb|ELW43779.1| putrescine-binding periplasmic protein [Escherichia coli 95.0083]
gi|444674070|gb|ELW45654.1| putrescine-binding periplasmic protein [Escherichia coli 99.0670]
Length = 370
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 73/165 (44%), Gaps = 29/165 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP K +A PY W T IGY K + AP++ W PE + +S +++
Sbjct: 124 DPDNK-FAMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDA 182
Query: 281 PREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAV 325
P EV A +L L L +R F S+ Y+ GD+ VA+
Sbjct: 183 PEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 242
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 243 GWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|407775327|ref|ZP_11122622.1| extracellular solute-binding protein [Thalassospira profundimaris
WP0211]
gi|407281752|gb|EKF07313.1| extracellular solute-binding protein [Thalassospira profundimaris
WP0211]
Length = 368
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 83/186 (44%), Gaps = 42/186 (22%)
Query: 234 WAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGRIS-----MVNSPREVI- 285
+A PY WGT GY +K Q + AP++ W + P+ A ++S +++ P E++
Sbjct: 127 FAVPYFWGTNGFGYNVAKVQEVLGDDAPLDSWAMIFDPKYAEKLSSCGLSLLDDPGEIVP 186
Query: 286 --------VAGGKIAVQ------QNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDV 331
V G+ + + L + V F S+ Y+ G+V ++VGWS DV
Sbjct: 187 LVNFYLGNVPEGEPTTESIESAFEQLEKIRPHVTYFHSSQYINDLANGNVCISVGWSGDV 246
Query: 332 LPAVKRM------SNVAVVVPKSGASLWADLWAIPAASRLETKQIGGQVRGPSP-LIHQW 384
A R + + V+PK G +W D IP + P+P L H++
Sbjct: 247 GMAALRAEEAGNGNEIKYVIPKEGTLIWFDAMMIPEDA-------------PNPDLAHKF 293
Query: 385 IEFCLQ 390
I++ L+
Sbjct: 294 IDYVLR 299
>gi|194433166|ref|ZP_03065448.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Shigella dysenteriae 1012]
gi|417672890|ref|ZP_12322349.1| putrescine-binding periplasmic protein [Shigella dysenteriae
155-74]
gi|194418663|gb|EDX34750.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Shigella dysenteriae 1012]
gi|332091100|gb|EGI96190.1| putrescine-binding periplasmic protein [Shigella dysenteriae
155-74]
Length = 370
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 73/165 (44%), Gaps = 29/165 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP K +A PY W T IGY K + AP++ W PE + +S +++
Sbjct: 124 DPDNK-FAMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDA 182
Query: 281 PREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAV 325
P EV A +L L L +R F S+ Y+ GD+ VA+
Sbjct: 183 PEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 242
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 243 GWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|104781971|ref|YP_608469.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas entomophila L48]
gi|95110958|emb|CAK15676.1| putative putrescine ABC transporter, periplasmic putrescine-binding
protein [Pseudomonas entomophila L48]
Length = 362
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 71/166 (42%), Gaps = 33/166 (19%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSK----------------FQNHNLAPIE-------DWK 264
DP G +A PY WGT IGY K F+ NL ++ D
Sbjct: 118 DP-GNQYAVPYLWGTNGIGYNVDKVKAVLGIDRIDSWAVLFEPENLKKLKQCGVAFMDSP 176
Query: 265 DPWWPELAGRISMVNSPREVIVAGGKIAVQQNLALLANQVRLFDSTHYLKAFGIGDVWVA 324
D +P + + M +PR + A + L L + F S+ Y+ GDV +A
Sbjct: 177 DELYPAMLNYLGM--NPRSEKADDYRKAEARFLELRP-YITYFHSSKYVSDLANGDVCIA 233
Query: 325 VGWSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIPAASR 364
G+S DVL A R VA +PK G++LW DL AIP ++
Sbjct: 234 FGYSGDVLQAAHRAEEAGNGVKVAYSIPKEGSNLWFDLLAIPKDAK 279
>gi|421725684|ref|ZP_16164869.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella oxytoca M5al]
gi|410373478|gb|EKP28174.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella oxytoca M5al]
Length = 370
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 86/207 (41%), Gaps = 33/207 (15%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP K +A PY W T IGY K + AP++ W PE + +S +++
Sbjct: 124 DPDNK-YAIPYLWATTGIGYNIDKVKAVLGKDAPLDSWDLVMKPENLEKLKSCGVSFLDA 182
Query: 281 PREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAV 325
P E+ A +L L L +R F S+ Y+ GD+ VA+
Sbjct: 183 PEEIFATVLNYLGKDPNSSKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 242
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIP--AASRLETKQIGGQVRGP 377
GW+ DV A R NV+ +PK GA + D++A+P A ++ E Q + P
Sbjct: 243 GWAGDVWQAANRAKEAKNGVNVSYFIPKEGALAFFDVFAMPADAKNKDEAYQFLNYLMRP 302
Query: 378 SPLIH--QWIEFCLQTARALPFKQEVI 402
+ H + + +LP E I
Sbjct: 303 DVIAHISDHVYYANGNKASLPLVSEEI 329
>gi|191166164|ref|ZP_03027998.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli B7A]
gi|417595859|ref|ZP_12246518.1| putrescine-binding periplasmic protein [Escherichia coli 3030-1]
gi|190903773|gb|EDV63488.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli B7A]
gi|345358605|gb|EGW90788.1| putrescine-binding periplasmic protein [Escherichia coli 3030-1]
Length = 370
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 73/165 (44%), Gaps = 29/165 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP K +A PY W T IGY K + AP++ W PE + +S +++
Sbjct: 124 DPDNK-FAMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDA 182
Query: 281 PREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAV 325
P EV A +L L L +R F S+ Y+ GD+ VA+
Sbjct: 183 PEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 242
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 243 GWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|386618312|ref|YP_006137892.1| Putrescine ABC transporter putrescine-binding protein [Escherichia
coli NA114]
gi|432420929|ref|ZP_19663484.1| putrescine-binding periplasmic protein [Escherichia coli KTE178]
gi|432557835|ref|ZP_19794524.1| putrescine-binding periplasmic protein [Escherichia coli KTE49]
gi|432709652|ref|ZP_19944717.1| putrescine-binding periplasmic protein [Escherichia coli KTE6]
gi|333968813|gb|AEG35618.1| Putrescine ABC transporter putrescine-binding protein [Escherichia
coli NA114]
gi|430946546|gb|ELC66469.1| putrescine-binding periplasmic protein [Escherichia coli KTE178]
gi|431093913|gb|ELD99569.1| putrescine-binding periplasmic protein [Escherichia coli KTE49]
gi|431251354|gb|ELF45371.1| putrescine-binding periplasmic protein [Escherichia coli KTE6]
Length = 370
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 73/165 (44%), Gaps = 29/165 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP K +A PY W T IGY K + AP++ W PE + +S +++
Sbjct: 124 DPDNK-FAMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDA 182
Query: 281 PREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAV 325
P EV A +L L L +R F S+ Y+ GD+ VA+
Sbjct: 183 PEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 242
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 243 GWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|417322038|ref|ZP_12108572.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio
parahaemolyticus 10329]
gi|328470192|gb|EGF41103.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio
parahaemolyticus 10329]
Length = 344
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 88/213 (41%), Gaps = 44/213 (20%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVIVA 287
DP+ ++ PY WG I Y +S + P+ W D W + ++ +++ R+V
Sbjct: 117 DPKND-YSLPYIWGITGISYNESMVEQ----PVTKWADLWESQYEQQVMLIDDVRDVF-- 169
Query: 288 GGKIAVQQN------------------LALLANQVRLFDSTHYLKAFGIGDVWVAVGWSS 329
+A+++N L L N V L++S + G+ V + W+
Sbjct: 170 --GMALKKNGHSVNTKDEAEIKQAFDSLVALKNNVLLYNSDAPQVPYVSGETSVGMQWNG 227
Query: 330 DVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGQVRGPSPLIHQWIEFCL 389
+ M + V+P+ GA LW D + IP+ S+ L H++I F
Sbjct: 228 NAFQGQVEMPELKFVMPEEGAVLWMDNFTIPSGSK------------NKALAHKFINFMY 275
Query: 390 QTARALPFKQEVIPG-ASPSALESTLVKLPEEL 421
Q+ + E++ SA + KLPEEL
Sbjct: 276 QSEN----QAEIVTSLGYASATNAGRDKLPEEL 304
>gi|312963723|ref|ZP_07778194.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas fluorescens WH6]
gi|311281758|gb|EFQ60368.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas fluorescens WH6]
Length = 364
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 71/159 (44%), Gaps = 27/159 (16%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKF-QNHNLAPIEDWKDPWWPELAGR-----ISMVNSP 281
DP G +A PY WGT IGY K Q + I+ W + PE + +S ++S
Sbjct: 120 DP-GNQYAVPYLWGTNGIGYNVDKVKQVLGVDHIDSWAVLFEPENMKKLATCGVSFMDSA 178
Query: 282 REVIVA--------------GGKIAVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGW 327
E++ A ++ L + V F S+ Y+ G++ VA G+
Sbjct: 179 DEMLPAVLNYMGLNPNSTNPDDYKKAEEKLLKVRPYVTYFHSSKYISDLANGNICVAAGF 238
Query: 328 SSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIP 360
S DV A R S N+A V+PK G +LW D+ AIP
Sbjct: 239 SGDVFQAKARASEAGKGVNIAYVIPKEGGNLWFDVLAIP 277
>gi|170769001|ref|ZP_02903454.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia albertii TW07627]
gi|170122073|gb|EDS91004.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia albertii TW07627]
Length = 370
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 73/165 (44%), Gaps = 29/165 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP K +A PY W T IGY K + AP++ W PE + +S +++
Sbjct: 124 DPDNK-FAMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDA 182
Query: 281 PREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAV 325
P EV A +L L L +R F S+ Y+ GD+ VA+
Sbjct: 183 PEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 242
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 243 GWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|417638181|ref|ZP_12288347.1| putrescine-binding periplasmic protein [Escherichia coli TX1999]
gi|419168841|ref|ZP_13713235.1| putrescine-binding periplasmic protein [Escherichia coli DEC7A]
gi|419179821|ref|ZP_13723444.1| potF [Escherichia coli DEC7C]
gi|419185382|ref|ZP_13728904.1| potF [Escherichia coli DEC7D]
gi|419190576|ref|ZP_13734043.1| putrescine-binding periplasmic protein [Escherichia coli DEC7E]
gi|419864881|ref|ZP_14387276.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O103:H25 str. CVM9340]
gi|420384482|ref|ZP_14883866.1| putrescine-binding periplasmic protein [Escherichia coli EPECa12]
gi|427803967|ref|ZP_18971034.1| periplasmic putrescine-binding protein [Escherichia coli chi7122]
gi|427808553|ref|ZP_18975618.1| periplasmic putrescine-binding protein; permease protein
[Escherichia coli]
gi|433129206|ref|ZP_20314674.1| putrescine-binding periplasmic protein [Escherichia coli KTE163]
gi|433134030|ref|ZP_20319403.1| putrescine-binding periplasmic protein [Escherichia coli KTE166]
gi|443616928|ref|YP_007380784.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli APEC O78]
gi|345395035|gb|EGX24788.1| putrescine-binding periplasmic protein [Escherichia coli TX1999]
gi|378018059|gb|EHV80926.1| putrescine-binding periplasmic protein [Escherichia coli DEC7A]
gi|378027006|gb|EHV89638.1| potF [Escherichia coli DEC7C]
gi|378032800|gb|EHV95381.1| potF [Escherichia coli DEC7D]
gi|378041813|gb|EHW04271.1| putrescine-binding periplasmic protein [Escherichia coli DEC7E]
gi|388338572|gb|EIL05020.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O103:H25 str. CVM9340]
gi|391308840|gb|EIQ66527.1| putrescine-binding periplasmic protein [Escherichia coli EPECa12]
gi|412962149|emb|CCK46063.1| periplasmic putrescine-binding protein [Escherichia coli chi7122]
gi|412968732|emb|CCJ43357.1| periplasmic putrescine-binding protein; permease protein
[Escherichia coli]
gi|431650784|gb|ELJ18095.1| putrescine-binding periplasmic protein [Escherichia coli KTE163]
gi|431661316|gb|ELJ28130.1| putrescine-binding periplasmic protein [Escherichia coli KTE166]
gi|443421436|gb|AGC86340.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli APEC O78]
Length = 370
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 73/165 (44%), Gaps = 29/165 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP K +A PY W T IGY K + AP++ W PE + +S +++
Sbjct: 124 DPDNK-FAMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDA 182
Query: 281 PREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAV 325
P EV A +L L L +R F S+ Y+ GD+ VA+
Sbjct: 183 PEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 242
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 243 GWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|77461625|ref|YP_351132.1| extracellular solute-binding protein [Pseudomonas fluorescens
Pf0-1]
gi|77385628|gb|ABA77141.1| putrescine ABC transport system, substrate-binding periplasmic
protein precursor [Pseudomonas fluorescens Pf0-1]
Length = 375
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 73/167 (43%), Gaps = 37/167 (22%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN-HNLAPIEDWKDPWWPELAGR-----ISMVNSP 281
DP G ++A PY WGT IGY K + + I+ W + PE + ++ ++S
Sbjct: 131 DP-GNLYAVPYLWGTNGIGYNVDKVKAVLGVDKIDSWSVLFEPENIKKLHSCGVAFLDSA 189
Query: 282 REVIVAGGKIAVQQNLALLANQ-------------------VRLFDSTHYLKAFGIGDVW 322
E++ V + L AN V F S+ Y+ GD+
Sbjct: 190 DEMMP-----TVLNYMGLNANSTNPKDYEKATAKLLAVRPYVTYFHSSKYIGDLANGDIC 244
Query: 323 VAVGWSSDVLPA------VKRMSNVAVVVPKSGASLWADLWAIPAAS 363
VA+G+S D+ A K+ N+A +PK G +LW D+ AIP S
Sbjct: 245 VAIGFSGDIFQAKNRAEEAKKGVNIAYSIPKEGGALWFDMLAIPKDS 291
>gi|416288836|ref|ZP_11649363.1| Putrescine ABC transporter putrescine-binding protein PotF
[Shigella boydii ATCC 9905]
gi|320177812|gb|EFW52798.1| Putrescine ABC transporter putrescine-binding protein PotF
[Shigella boydii ATCC 9905]
Length = 358
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 74/166 (44%), Gaps = 31/166 (18%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQ---NHNLAPIEDWKDPWWPELAGR-----ISMVN 279
DP K +A PY W T IGY K + N AP++ W PE + +S ++
Sbjct: 124 DPDNK-FAMPYMWATTGIGYNVDKVKAVLGEN-APVDSWDLILKPENLEKLKSCGVSFLD 181
Query: 280 SPREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVA 324
+P EV A +L L L +R F S+ Y+ GD+ VA
Sbjct: 182 APEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVA 241
Query: 325 VGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
+GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 242 IGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|260867027|ref|YP_003233429.1| putrescine transporter subunit PotF [Escherichia coli O111:H- str.
11128]
gi|415824741|ref|ZP_11512975.1| putrescine-binding periplasmic protein [Escherichia coli OK1180]
gi|417192859|ref|ZP_12014706.1| putrescine-binding periplasmic protein [Escherichia coli 4.0522]
gi|417590576|ref|ZP_12241291.1| putrescine-binding periplasmic protein [Escherichia coli 2534-86]
gi|419195972|ref|ZP_13739376.1| putrescine-binding periplasmic protein [Escherichia coli DEC8A]
gi|419891682|ref|ZP_14411727.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O111:H8 str. CVM9570]
gi|419894607|ref|ZP_14414503.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O111:H8 str. CVM9574]
gi|420088758|ref|ZP_14600618.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O111:H8 str. CVM9602]
gi|420098068|ref|ZP_14609349.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O111:H8 str. CVM9634]
gi|424769414|ref|ZP_18196641.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O111:H8 str.
CFSAN001632]
gi|257763383|dbj|BAI34878.1| putrescine transporter subunit PotF [Escherichia coli O111:H- str.
11128]
gi|323175524|gb|EFZ61119.1| putrescine-binding periplasmic protein [Escherichia coli OK1180]
gi|345344522|gb|EGW76889.1| putrescine-binding periplasmic protein [Escherichia coli 2534-86]
gi|378051780|gb|EHW14095.1| putrescine-binding periplasmic protein [Escherichia coli DEC8A]
gi|386190040|gb|EIH78788.1| putrescine-binding periplasmic protein [Escherichia coli 4.0522]
gi|388349030|gb|EIL14580.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O111:H8 str. CVM9570]
gi|388363444|gb|EIL27373.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O111:H8 str. CVM9574]
gi|394382247|gb|EJE59894.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O111:H8 str. CVM9634]
gi|394389548|gb|EJE66690.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O111:H8 str. CVM9602]
gi|421944063|gb|EKU01325.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O111:H8 str.
CFSAN001632]
Length = 370
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 73/165 (44%), Gaps = 29/165 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP K +A PY W T IGY K + AP++ W PE + +S +++
Sbjct: 124 DPDNK-FAMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDA 182
Query: 281 PREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAV 325
P EV A +L L L +R F S+ Y+ GD+ VA+
Sbjct: 183 PEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 242
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 243 GWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|16802852|ref|NP_464337.1| hypothetical protein lmo0810 [Listeria monocytogenes EGD-e]
gi|46907040|ref|YP_013429.1| spermidine/putrescine ABC transporter substrate-binding protein
[Listeria monocytogenes serotype 4b str. F2365]
gi|47094815|ref|ZP_00232429.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Listeria
monocytogenes str. 1/2a F6854]
gi|226223427|ref|YP_002757534.1| spermidine/putrescine-binding protein [Listeria monocytogenes
serotype 4b str. CLIP 80459]
gi|254823923|ref|ZP_05228924.1| spermidine/putrescine ABC transporter [Listeria monocytogenes FSL
J1-194]
gi|254828893|ref|ZP_05233580.1| spermidine/putrescine ABC transporter [Listeria monocytogenes FSL
N3-165]
gi|254853773|ref|ZP_05243121.1| spermidine/putrescine ABC transporter [Listeria monocytogenes FSL
R2-503]
gi|254911493|ref|ZP_05261505.1| spermidine/putrescine ABC transporter [Listeria monocytogenes
J2818]
gi|254931190|ref|ZP_05264549.1| spermidine/putrescine ABC transporter [Listeria monocytogenes
HPB2262]
gi|254935819|ref|ZP_05267516.1| spermidine/putrescine ABC transporter [Listeria monocytogenes
F6900]
gi|284801140|ref|YP_003413005.1| hypothetical protein LM5578_0889 [Listeria monocytogenes 08-5578]
gi|284994282|ref|YP_003416050.1| hypothetical protein LM5923_0844 [Listeria monocytogenes 08-5923]
gi|300765116|ref|ZP_07075103.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Listeria
monocytogenes FSL N1-017]
gi|386043137|ref|YP_005961942.1| spermidine/putrescine transport system substrate-binding protein
[Listeria monocytogenes 10403S]
gi|386046472|ref|YP_005964804.1| spermidine/putrescine ABC transporter [Listeria monocytogenes
J0161]
gi|386049737|ref|YP_005967728.1| spermidine/putrescine ABC transporter [Listeria monocytogenes FSL
R2-561]
gi|386053073|ref|YP_005970631.1| spermidine/putrescine ABC transporter [Listeria monocytogenes
Finland 1998]
gi|386731563|ref|YP_006205059.1| extracellular solute-binding protein [Listeria monocytogenes
07PF0776]
gi|404280362|ref|YP_006681260.1| spermidine/putrescine ABC transporter substrate-binding protein
[Listeria monocytogenes SLCC2755]
gi|404283250|ref|YP_006684147.1| spermidine/putrescine ABC transporter substrate-binding protein
[Listeria monocytogenes SLCC2372]
gi|404286220|ref|YP_006692806.1| spermidine/putrescine ABC transporter substrate-binding protein
[Listeria monocytogenes serotype 7 str. SLCC2482]
gi|404410049|ref|YP_006695637.1| spermidine/putrescine ABC transporter substrate-binding protein
[Listeria monocytogenes SLCC5850]
gi|404412893|ref|YP_006698480.1| spermidine/putrescine ABC transporter substrate-binding protein
[Listeria monocytogenes SLCC7179]
gi|405749162|ref|YP_006672628.1| spermidine/putrescine ABC transporter substrate-binding protein
[Listeria monocytogenes ATCC 19117]
gi|405752027|ref|YP_006675492.1| spermidine/putrescine ABC transporter substrate-binding protein
[Listeria monocytogenes SLCC2378]
gi|405754888|ref|YP_006678352.1| spermidine/putrescine ABC transporter substrate-binding protein
[Listeria monocytogenes SLCC2540]
gi|405757805|ref|YP_006687081.1| spermidine/putrescine ABC transporter substrate-binding protein
[Listeria monocytogenes SLCC2479]
gi|406703584|ref|YP_006753938.1| spermidine/putrescine ABC transporter, substrate-binding protein
[Listeria monocytogenes L312]
gi|417317055|ref|ZP_12103681.1| extracellular solute-binding protein family 1 [Listeria
monocytogenes J1-220]
gi|424713687|ref|YP_007014402.1| Spermidine/putrescine-binding periplasmic protein 2 [Listeria
monocytogenes serotype 4b str. LL195]
gi|424822534|ref|ZP_18247547.1| periplasmic protein (SPBP) [Listeria monocytogenes str. Scott A]
gi|16410199|emb|CAC98888.1| lmo0810 [Listeria monocytogenes EGD-e]
gi|46880306|gb|AAT03606.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Listeria
monocytogenes serotype 4b str. F2365]
gi|47016697|gb|EAL07616.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Listeria
monocytogenes str. 1/2a F6854]
gi|225875889|emb|CAS04593.1| Putative spermidine/putrescine-binding protein [Listeria
monocytogenes serotype 4b str. CLIP 80459]
gi|258601306|gb|EEW14631.1| spermidine/putrescine ABC transporter [Listeria monocytogenes FSL
N3-165]
gi|258607153|gb|EEW19761.1| spermidine/putrescine ABC transporter [Listeria monocytogenes FSL
R2-503]
gi|258608406|gb|EEW21014.1| spermidine/putrescine ABC transporter [Listeria monocytogenes
F6900]
gi|284056702|gb|ADB67643.1| hypothetical protein LM5578_0889 [Listeria monocytogenes 08-5578]
gi|284059749|gb|ADB70688.1| hypothetical protein LM5923_0844 [Listeria monocytogenes 08-5923]
gi|293582738|gb|EFF94770.1| spermidine/putrescine ABC transporter [Listeria monocytogenes
HPB2262]
gi|293589436|gb|EFF97770.1| spermidine/putrescine ABC transporter [Listeria monocytogenes
J2818]
gi|293593149|gb|EFG00910.1| spermidine/putrescine ABC transporter [Listeria monocytogenes FSL
J1-194]
gi|300514241|gb|EFK41301.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Listeria
monocytogenes FSL N1-017]
gi|328475514|gb|EGF46273.1| extracellular solute-binding protein family 1 [Listeria
monocytogenes J1-220]
gi|332311214|gb|EGJ24309.1| periplasmic protein (SPBP) [Listeria monocytogenes str. Scott A]
gi|345533463|gb|AEO02904.1| spermidine/putrescine ABC transporter [Listeria monocytogenes
J0161]
gi|345536371|gb|AEO05811.1| spermidine/putrescine transport system substrate-binding protein
[Listeria monocytogenes 10403S]
gi|346423583|gb|AEO25108.1| spermidine/putrescine ABC transporter [Listeria monocytogenes FSL
R2-561]
gi|346645724|gb|AEO38349.1| spermidine/putrescine ABC transporter [Listeria monocytogenes
Finland 1998]
gi|384390321|gb|AFH79391.1| extracellular solute-binding protein family 1 [Listeria
monocytogenes 07PF0776]
gi|404218362|emb|CBY69726.1| spermidine/putrescine ABC transporter, substrate-binding protein
[Listeria monocytogenes ATCC 19117]
gi|404221227|emb|CBY72590.1| spermidine/putrescine ABC transporter, substrate-binding protein
[Listeria monocytogenes SLCC2378]
gi|404224088|emb|CBY75450.1| spermidine/putrescine ABC transporter, substrate-binding protein
[Listeria monocytogenes SLCC2540]
gi|404226997|emb|CBY48402.1| spermidine/putrescine ABC transporter, substrate-binding protein
[Listeria monocytogenes SLCC2755]
gi|404229875|emb|CBY51279.1| spermidine/putrescine ABC transporter, substrate-binding protein
[Listeria monocytogenes SLCC5850]
gi|404232752|emb|CBY54155.1| spermidine/putrescine ABC transporter, substrate-binding protein
[Listeria monocytogenes SLCC2372]
gi|404235687|emb|CBY57089.1| spermidine/putrescine ABC transporter, substrate-binding protein
[Listeria monocytogenes SLCC2479]
gi|404238592|emb|CBY59993.1| spermidine/putrescine ABC transporter, substrate-binding protein
[Listeria monocytogenes SLCC7179]
gi|404245149|emb|CBY03374.1| spermidine/putrescine ABC transporter, substrate-binding protein
[Listeria monocytogenes serotype 7 str. SLCC2482]
gi|406360614|emb|CBY66887.1| spermidine/putrescine ABC transporter, substrate-binding protein
[Listeria monocytogenes L312]
gi|424012871|emb|CCO63411.1| Spermidine/putrescine-binding periplasmic protein 2 [Listeria
monocytogenes serotype 4b str. LL195]
Length = 357
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 91/203 (44%), Gaps = 34/203 (16%)
Query: 234 WAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVIVAG----G 289
++ PY WGT+ I Y K F + N + W + PEL +I +++ REV+ G G
Sbjct: 132 YSMPYFWGTLGIIYNKEMFPDKNF---DTWNALFDPELKNQILLIDGAREVMGLGLNSLG 188
Query: 290 KIAVQQNLA-LLANQVRLFDSTHYLKAFGIGD----------VWVAVGWSSDVLPAVKRM 338
N A L A + +L T +KA +GD VAV +S + +
Sbjct: 189 YSLNDTNKAHLQAARDKLETMTPNVKAI-VGDEIKLLMADNEAGVAVTFSGEAAEMLSEN 247
Query: 339 SNVAVVVPKSGASLWADLWAIPAASRLETKQIGGQVRGPSPLIHQWIEFCLQTARALPFK 398
++ V+PK G++LW D IP + K + G H++I F L+ A
Sbjct: 248 EDLEYVIPKDGSNLWFDNMVIPKTA----KNVDGA--------HKFINFMLKPENA-AIN 294
Query: 399 QEVIPGASPSALESTLVKLPEEL 421
E + A+P+A L LP+E+
Sbjct: 295 AEYVGYATPNAKAVEL--LPKEI 315
>gi|395446064|ref|YP_006386317.1| extracellular solute-binding protein [Pseudomonas putida ND6]
gi|388560061|gb|AFK69202.1| extracellular solute-binding protein [Pseudomonas putida ND6]
Length = 364
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 72/163 (44%), Gaps = 27/163 (16%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQNH-NLAPIEDWKDPWWPELAGRIS-----MVNSP 281
DP G +A PY WGT IGY K + + I+ W + PE ++S ++S
Sbjct: 120 DP-GNQYAVPYLWGTNGIGYNVDKVKAALGVDTIDSWAVLFEPENMKKLSKCGVAFLDSA 178
Query: 282 REVIVA--------------GGKIAVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGW 327
E++ A +Q L + V F S+ Y+ GD+ VA G+
Sbjct: 179 DEMLPAVLNYMGLNPNSTDPKDYAKAEQKLLAVRPYVTYFHSSKYITDLANGDICVAAGF 238
Query: 328 SSDVLPA------VKRMSNVAVVVPKSGASLWADLWAIPAASR 364
S DV A K+ N+A +PK G +LW D+ AIP ++
Sbjct: 239 SGDVFQAKARAEEAKKGVNLAYAIPKEGGNLWFDVLAIPKDAK 281
>gi|417230223|ref|ZP_12031809.1| putrescine-binding periplasmic protein [Escherichia coli 5.0959]
gi|386206713|gb|EII11219.1| putrescine-binding periplasmic protein [Escherichia coli 5.0959]
Length = 370
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 73/165 (44%), Gaps = 29/165 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP K +A PY W T IGY K + AP++ W PE + +S +++
Sbjct: 124 DPDNK-FAMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDA 182
Query: 281 PREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAV 325
P EV A +L L L +R F S+ Y+ GD+ VA+
Sbjct: 183 PEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 242
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 243 GWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|339998775|ref|YP_004729658.1| putrescine-binding periplasmic protein [Salmonella bongori NCTC
12419]
gi|339512136|emb|CCC29867.1| putrescine-binding periplasmic protein precursor [Salmonella
bongori NCTC 12419]
Length = 370
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 71/165 (43%), Gaps = 29/165 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP K +A PY W T IGY K + AP+ W PE + +S +++
Sbjct: 124 DPDNK-YAMPYMWATTGIGYNVDKVKAVLGEDAPVNSWDLVLKPENLAKLKSCGVSFLDA 182
Query: 281 PREVIVAG----GKIAVQQN-----------LALLANQVRLFDSTHYLKAFGIGDVWVAV 325
P E+ GK N L L +R F S+ Y+ GD VA+
Sbjct: 183 PEEIFATVLNYLGKDPNSSNANDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDTCVAI 242
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
GW+ DV A R N++ +PK GA + D++A+PA ++
Sbjct: 243 GWAGDVWQAANRAKEAKNGVNISFSIPKEGAMAFFDVFAMPADAK 287
>gi|315641327|ref|ZP_07896403.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Enterococcus italicus DSM
15952]
gi|315482900|gb|EFU73420.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Enterococcus italicus DSM
15952]
Length = 357
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 98/222 (44%), Gaps = 49/222 (22%)
Query: 226 EIDPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVI 285
+ DP G ++ PY WGT+ I Y KF N + W D W PEL I +++ RE+I
Sbjct: 125 DFDP-GNQYSIPYFWGTLGIVYN-DKFVNA--EDMTSWNDLWRPELKDNIMLIDGAREII 180
Query: 286 VAG----GKIAVQQNL------------------ALLANQVRLFDSTHYLKAFGIGDVWV 323
G G +N+ A++A++++++ + V
Sbjct: 181 GLGLNSLGYSVNSKNMDQLNQAVAKLRTLTPNVKAIVADEIKMYMENE--------ESAV 232
Query: 324 AVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGQVRGPSPLIHQ 383
AV +S + + S++ V+PK G +LW+D IP S+ Q G +
Sbjct: 233 AVTFSGEAADMMYENSHLHYVIPKEGTNLWSDNIVIPKTSK---NQEGA---------YA 280
Query: 384 WIEFCLQTARALPFKQEVIPGASPSALESTLVKLPEELLKGK 425
+I F L+ A E I ++P+ E+ + +P+E+++ K
Sbjct: 281 FINFMLEPKNAAQ-NAEYIGYSTPN--EAAMKLMPKEVVEDK 319
>gi|227329301|ref|ZP_03833325.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Pectobacterium carotovorum subsp.
carotovorum WPP14]
Length = 369
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 71/165 (43%), Gaps = 29/165 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGY--KKSKFQNHNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP K +A PY W T IGY +K K AP+ W PE + +S +++
Sbjct: 123 DPDNK-YALPYLWATTGIGYNVEKVKAALGADAPVNSWDLVLKPENLEKLKSCGVSFLDA 181
Query: 281 PREVIVA--------------GGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAV 325
P E+ G +L L L +R F S+ Y+ GD+ VAV
Sbjct: 182 PEEIFATVLNYQGKDPNSTKPGDYTTSATDLLLKLRPNIRYFHSSQYINDLANGDICVAV 241
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
GW+ D+L A R N+ +PK GA + D+ AIP ++
Sbjct: 242 GWAGDILQAGNRAKEAKNGVNIQYSIPKEGALAFFDVLAIPKDAK 286
>gi|386825143|ref|ZP_10112270.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Serratia plymuthica PRI-2C]
gi|386378000|gb|EIJ18810.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Serratia plymuthica PRI-2C]
Length = 369
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 69/159 (43%), Gaps = 28/159 (17%)
Query: 234 WAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNSPREVIV 286
+ PY T IGY K + AP++ W PE + +S +++P E+
Sbjct: 128 YGIPYLMVTTGIGYNVDKVKAVLGKDAPVDSWDLILKPENLEKLKSCGVSFLDAPSEIYA 187
Query: 287 --------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAVGWSSDV 331
A +L L L +R F S+ Y+ GD+ VA+GWS DV
Sbjct: 188 TVLHYLGKDPNSTNAADYTGAANDLLLKLRPNIRYFHSSQYINDLANGDICVAIGWSGDV 247
Query: 332 LPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
+ A R NVA +PK GA + D++A+PA ++
Sbjct: 248 MQAANRAKEAKNGVNVAYTIPKEGALTYFDMFAMPADAK 286
>gi|254993330|ref|ZP_05275520.1| spermidine/putrescine-binding protein [Listeria monocytogenes FSL
J2-064]
Length = 357
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 91/203 (44%), Gaps = 34/203 (16%)
Query: 234 WAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVIVAG----G 289
++ PY WGT+ I Y K F + N + W + PEL +I +++ REV+ G G
Sbjct: 132 YSMPYFWGTLGIIYNKEMFPDKNF---DTWNALFDPELKNQILLIDGAREVMGLGLNSLG 188
Query: 290 KIAVQQNLA-LLANQVRLFDSTHYLKAFGIGD----------VWVAVGWSSDVLPAVKRM 338
N A L A + +L T +KA +GD VAV +S + +
Sbjct: 189 YSLNDTNKAHLQAARDKLETMTPNVKAI-VGDEIKLLMADNEAGVAVTFSGEAAEMLSEN 247
Query: 339 SNVAVVVPKSGASLWADLWAIPAASRLETKQIGGQVRGPSPLIHQWIEFCLQTARALPFK 398
++ V+PK G++LW D IP + K + G H++I F L+ A
Sbjct: 248 EDLEYVIPKDGSNLWFDNMVIPKTA----KNVDGA--------HKFINFMLKPENA-AIN 294
Query: 399 QEVIPGASPSALESTLVKLPEEL 421
E + A+P+A L LP+E+
Sbjct: 295 AEYVGYATPNAKAVEL--LPKEI 315
>gi|153837449|ref|ZP_01990116.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio
parahaemolyticus AQ3810]
gi|149749249|gb|EDM60034.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio
parahaemolyticus AQ3810]
Length = 344
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 88/213 (41%), Gaps = 44/213 (20%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVIVA 287
DP+ ++ PY WG I Y +S + P+ W D W + ++ +++ R+V
Sbjct: 117 DPKND-YSLPYIWGITGISYNESMVEQ----PVTKWADLWESQYEQQVMLIDDVRDVF-- 169
Query: 288 GGKIAVQQN------------------LALLANQVRLFDSTHYLKAFGIGDVWVAVGWSS 329
+A+++N L L N V L++S + G+ V + W+
Sbjct: 170 --GMALKKNGHSVNTKDEAEIKQAFDSLVALKNNVLLYNSDAPQVPYVSGETSVGMQWNG 227
Query: 330 DVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGQVRGPSPLIHQWIEFCL 389
+ M + V+P+ GA LW D + IP+ S+ L H++I F
Sbjct: 228 NAFQGQVEMPELKFVMPEEGAVLWMDNFTIPSGSK------------NKALAHKFINFMY 275
Query: 390 QTARALPFKQEVIPG-ASPSALESTLVKLPEEL 421
Q+ + E++ SA + KLPEEL
Sbjct: 276 QSEN----QAEIVTSLGYASATNAGRDKLPEEL 304
>gi|325271715|ref|ZP_08138201.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas sp. TJI-51]
gi|324103150|gb|EGC00511.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas sp. TJI-51]
Length = 364
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 72/163 (44%), Gaps = 27/163 (16%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQNH-NLAPIEDWKDPWWPELAGRIS-----MVNSP 281
DP G +A PY WGT IGY K + + I+ W + PE ++S ++S
Sbjct: 120 DP-GNQYAVPYLWGTNGIGYNVDKVKAALGVDTIDSWAVLFEPENMKKLSKCGVAFLDSA 178
Query: 282 REVIVA--------------GGKIAVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGW 327
E++ A +Q L + V F S+ Y+ GD+ VA G+
Sbjct: 179 DEMLPAVLNYMGLNPNSTNPKDYAKAEQKLLAVRPYVTYFHSSKYITDLANGDICVAAGF 238
Query: 328 SSDVLPA------VKRMSNVAVVVPKSGASLWADLWAIPAASR 364
S DV A K+ N+A +PK G +LW D+ AIP ++
Sbjct: 239 SGDVFQAKARAEEAKKGVNLAYAIPKEGGNLWFDVLAIPKDAK 281
>gi|425899671|ref|ZP_18876262.1| periplasmic putrescine-binding protein [Pseudomonas chlororaphis
subsp. aureofaciens 30-84]
gi|397890487|gb|EJL06969.1| periplasmic putrescine-binding protein [Pseudomonas chlororaphis
subsp. aureofaciens 30-84]
Length = 362
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 70/160 (43%), Gaps = 27/160 (16%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKF-QNHNLAPIEDWKDPWWPELAGR-----ISMVNSP 281
DP G ++ PY WGT IGY K Q + I+ W + P+ + +SM++SP
Sbjct: 118 DP-GNQYSVPYLWGTNGIGYNVDKVKQVLGIDSIDSWAVFFEPQNLKKLSQCGVSMMDSP 176
Query: 282 REVIVA--------------GGKIAVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGW 327
EV A + L + + F S+ Y+ G++ +A G+
Sbjct: 177 DEVFPAMLNYLGLDPRSENPADYKKAEAKLLAIRPYITYFHSSKYVSDLANGNICLAFGY 236
Query: 328 SSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIPA 361
S DV A R +A +PK G++LW DL AIPA
Sbjct: 237 SGDVFQAANRAKEAKNGVKIAYSIPKEGSNLWFDLLAIPA 276
>gi|397697187|ref|YP_006535070.1| extracellular solute-binding protein [Pseudomonas putida DOT-T1E]
gi|421523437|ref|ZP_15970066.1| extracellular solute-binding protein [Pseudomonas putida LS46]
gi|397333917|gb|AFO50276.1| extracellular solute-binding protein [Pseudomonas putida DOT-T1E]
gi|402752423|gb|EJX12928.1| extracellular solute-binding protein [Pseudomonas putida LS46]
Length = 364
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 72/163 (44%), Gaps = 27/163 (16%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQNH-NLAPIEDWKDPWWPELAGRIS-----MVNSP 281
DP G +A PY WGT IGY K + + I+ W + PE ++S ++S
Sbjct: 120 DP-GNQYAVPYLWGTNGIGYNVDKVKAALGVDTIDSWAVLFEPENMKKLSKCGVAFLDSA 178
Query: 282 REVIVA--------------GGKIAVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGW 327
E++ A +Q L + V F S+ Y+ GD+ VA G+
Sbjct: 179 DEMLPAVLNYMGLNPNSTDPKDYAKAEQKLLAVRPYVTYFHSSKYITDLANGDICVAAGF 238
Query: 328 SSDVLPA------VKRMSNVAVVVPKSGASLWADLWAIPAASR 364
S DV A K+ N+A +PK G +LW D+ AIP ++
Sbjct: 239 SGDVFQAKARAEEAKKGVNLAYAIPKEGGNLWFDVLAIPKDAK 281
>gi|377576361|ref|ZP_09805345.1| putrescine ABC transporter substrate binding periplasmic protein
[Escherichia hermannii NBRC 105704]
gi|377542393|dbj|GAB50510.1| putrescine ABC transporter substrate binding periplasmic protein
[Escherichia hermannii NBRC 105704]
Length = 370
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 77/185 (41%), Gaps = 31/185 (16%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP K +A PY W T IGY K + P+ W PE + +S +++
Sbjct: 124 DPENK-YAMPYLWATTGIGYNVDKVKAALGGDVPLNSWDLVLKPENLAKLKSCGVSFLDA 182
Query: 281 PREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAV 325
P EV A L L L +R F S+ Y+ GD+ VA+
Sbjct: 183 PEEVFATVLNYLGKDPNSEKADDYTGPATELLLKLRPNIRYFHSSQYINDLANGDICVAI 242
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIP--AASRLETKQIGGQVRGP 377
GW+ DV A R N++ ++PK GA + D++A+P A ++ E Q + P
Sbjct: 243 GWAGDVWQAANRAKEAKNGVNISYIIPKEGALAFFDVFAMPTDAKNKEEAYQFLNYLMRP 302
Query: 378 SPLIH 382
+ H
Sbjct: 303 DVIAH 307
>gi|365888952|ref|ZP_09427683.1| putrescine ABC transporter, periplasmic binding protein
[Bradyrhizobium sp. STM 3809]
gi|365335351|emb|CCE00214.1| putrescine ABC transporter, periplasmic binding protein
[Bradyrhizobium sp. STM 3809]
Length = 368
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 111/269 (41%), Gaps = 49/269 (18%)
Query: 133 ALTVPLRVVSL---QNSVPQSWVKDFMRSQGKRLKF---------QMNLCASIDGIVNNL 180
A+T RVV+ N + + DF + G ++ + + L A G +
Sbjct: 23 AVTAEERVVNFYNWSNYMAPGVLDDFTKETGIKVVYDTFDANETLETRLLAGKSGYDVVV 82
Query: 181 STPFNKLSFAIKKRFIEPIAEAEDQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRW 240
T + L IK + +P+ +A+ L++ W V + DP G +AA Y W
Sbjct: 83 PTAY-FLQRQIKAKIFQPLDKAK----LPNLANAWPVV--TARLATYDP-GNQFAANYMW 134
Query: 241 GTMAIGYKKSKFQNHNLAP---IEDWKDPWWPELAGR-----ISMVNSPREVIVAG-GKI 291
GT IGY + L P I+ W + PE R + M++S ++ A +
Sbjct: 135 GTTGIGYNVKAIEKI-LGPGARIDSWDIVFKPENLARFKDCGVHMLDSADDIFPAALNYL 193
Query: 292 AVQQN-------------LALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRM 338
+ N + +A VR F S+ YL A G++ + VGWS D++ A R
Sbjct: 194 GLDPNSTKQADLEKAAEVVGKVAPSVRKFHSSEYLSALATGEICLVVGWSGDIMQARSRA 253
Query: 339 S------NVAVVVPKSGASLWADLWAIPA 361
+ +PK GA ++ D AIPA
Sbjct: 254 EEAKNGIEIGYAIPKEGAQMFFDNLAIPA 282
>gi|386014451|ref|YP_005932728.1| PotF [Pseudomonas putida BIRD-1]
gi|313501157|gb|ADR62523.1| PotF [Pseudomonas putida BIRD-1]
Length = 364
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 72/163 (44%), Gaps = 27/163 (16%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQNH-NLAPIEDWKDPWWPELAGRIS-----MVNSP 281
DP G +A PY WGT IGY K + + I+ W + PE ++S ++S
Sbjct: 120 DP-GNEYAVPYLWGTNGIGYNVDKVKAALGVDTIDSWAVLFEPENMKKLSKCGVAFLDSA 178
Query: 282 REVIVA--------------GGKIAVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGW 327
E++ A +Q L + V F S+ Y+ GD+ VA G+
Sbjct: 179 DEMLPAVLNYMGLNPNSTDPKDYAKAEQKLLAVRPYVTYFHSSKYITDLANGDICVAAGF 238
Query: 328 SSDVLPA------VKRMSNVAVVVPKSGASLWADLWAIPAASR 364
S DV A K+ N+A +PK G +LW D+ AIP ++
Sbjct: 239 SGDVFQAKARAEEAKKGVNLAYAIPKEGGNLWFDVLAIPKDAK 281
>gi|91224115|ref|ZP_01259378.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio
alginolyticus 12G01]
gi|433659509|ref|YP_007300368.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Vibrio parahaemolyticus BB22OP]
gi|91191026|gb|EAS77292.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio
alginolyticus 12G01]
gi|432510896|gb|AGB11713.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Vibrio parahaemolyticus BB22OP]
Length = 344
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 88/213 (41%), Gaps = 44/213 (20%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVIVA 287
DP+ ++ PY WG I Y +S + P+ W D W + ++ +++ R+V
Sbjct: 117 DPKND-YSLPYIWGITGISYNESMVEQ----PVTKWADLWESQYEQQVMLIDDVRDVF-- 169
Query: 288 GGKIAVQQN------------------LALLANQVRLFDSTHYLKAFGIGDVWVAVGWSS 329
+A+++N L L N V L++S + G+ V + W+
Sbjct: 170 --GMALKKNGHSVNTKDEAEIKQAFDSLVALKNNVLLYNSDAPQVPYVSGETSVGMQWNG 227
Query: 330 DVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGQVRGPSPLIHQWIEFCL 389
+ M + V+P+ GA LW D + IP+ S+ L H++I F
Sbjct: 228 NAFQGQVEMPELKFVMPEEGAVLWMDNFTIPSGSK------------NKALAHKFINFMY 275
Query: 390 QTARALPFKQEVIPG-ASPSALESTLVKLPEEL 421
Q+ + E++ SA + KLPEEL
Sbjct: 276 QSEN----QAEIVTSLGYASATNAGRDKLPEEL 304
>gi|358451773|ref|ZP_09162206.1| extracellular solute-binding protein [Marinobacter manganoxydans
MnI7-9]
gi|357224242|gb|EHJ02774.1| extracellular solute-binding protein [Marinobacter manganoxydans
MnI7-9]
Length = 346
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 86/216 (39%), Gaps = 33/216 (15%)
Query: 226 EIDPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVI 285
+IDP K ++ PY WGT + + + P+ W D W GR+ + N REV
Sbjct: 115 DIDPANK-FSVPYLWGTTGLAVDTADIEGE---PVTAWGDLWEDRFDGRVMLTNDMREVF 170
Query: 286 VAGGKI--------------AVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDV 331
G ++ A + LA L VR F+S + G+ V + W+ +
Sbjct: 171 HVGLRVLGYSGNSTNPDEIEAAYEKLAELMPSVRTFNSDAPRMPYLEGETDVGMIWNGEA 230
Query: 332 LPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGQVRGPSPLIHQWIEFCLQT 391
+ M ++ V P+ G W D + IP + P H +I F LQ
Sbjct: 231 VMGKDTMESLEYVYPEEGIIAWLDSFVIPK-----------NAKNPEA-AHHFISFVLQP 278
Query: 392 ARALPFKQEVIPGASPSALESTLVKLPEELLKGKPS 427
+ +E I A+P+ L LP+E+ + S
Sbjct: 279 EISALISEE-IGYATPNLAARDL--LPDEVANNRAS 311
>gi|283833847|ref|ZP_06353588.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Citrobacter youngae ATCC 29220]
gi|291070515|gb|EFE08624.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Citrobacter youngae ATCC 29220]
Length = 370
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 74/168 (44%), Gaps = 29/168 (17%)
Query: 225 GEIDPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISM 277
G+ DP K +A PY W T IGY K + AP++ W PE + +S
Sbjct: 121 GKHDPDNK-FAMPYMWATTGIGYNVDKVKAVLGPDAPVDSWDLILKPENLEKLKSCGVSF 179
Query: 278 VNSPREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVW 322
+++P EV A +L L L +R F S+ Y+ GD
Sbjct: 180 LDAPEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDTC 239
Query: 323 VAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
VA+GW+ DV A R N++ +PK GA + D++A+PA ++
Sbjct: 240 VAIGWAGDVWQAANRAKEAKNGVNISFSIPKEGAMAFFDVFAMPADAK 287
>gi|26991856|ref|NP_747281.1| spermidine/putrescine ABC transporter substrate-binding protein
[Pseudomonas putida KT2440]
gi|24986974|gb|AAN70745.1|AE016718_4 putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas putida KT2440]
Length = 364
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 72/163 (44%), Gaps = 27/163 (16%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQNH-NLAPIEDWKDPWWPELAGRIS-----MVNSP 281
DP G +A PY WGT IGY K + + I+ W + PE ++S ++S
Sbjct: 120 DP-GNQYAVPYLWGTNGIGYNVDKVKAALGVDTIDSWAVLFEPENMKKLSKCGVAFLDSA 178
Query: 282 REVIVA--------------GGKIAVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGW 327
E++ A +Q L + V F S+ Y+ GD+ VA G+
Sbjct: 179 DEMLPAVLNYMGLNPNSTDPKDYAKAEQKLLAVRPYVTYFHSSKYITDLANGDICVAAGF 238
Query: 328 SSDVLPA------VKRMSNVAVVVPKSGASLWADLWAIPAASR 364
S DV A K+ N+A +PK G +LW D+ AIP ++
Sbjct: 239 SGDVFQAKARAEEAKKGVNLAYAIPKEGGNLWFDVLAIPKDAK 281
>gi|417789994|ref|ZP_12437590.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Cronobacter sakazakii E899]
gi|449308836|ref|YP_007441192.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Cronobacter sakazakii SP291]
gi|333955915|gb|EGL73622.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Cronobacter sakazakii E899]
gi|449098869|gb|AGE86903.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Cronobacter sakazakii SP291]
Length = 370
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 78/185 (42%), Gaps = 31/185 (16%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP K +A PY W T IGY K + AP+ W PE + +S +++
Sbjct: 124 DPDNK-YAMPYLWATTGIGYNVDKVKAALGTDAPLNSWDLVLKPENLKKLKSCGVSFLDA 182
Query: 281 PREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAV 325
P E+ A +L L L +R F S+ Y+ GD+ VA+
Sbjct: 183 PEEIFATVLNYLGKDPNSSKADDYSGAATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 242
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIP--AASRLETKQIGGQVRGP 377
GW+ DV A R N++ +PK GA + D++A+P A ++ E Q + P
Sbjct: 243 GWAGDVWQAANRAKEAKNGVNISYTIPKEGALAFFDVFAMPADAKNKDEAYQFLNYLMRP 302
Query: 378 SPLIH 382
+ H
Sbjct: 303 DVMAH 307
>gi|290893772|ref|ZP_06556752.1| spermidine/putrescine ABC transporter [Listeria monocytogenes FSL
J2-071]
gi|404407260|ref|YP_006689975.1| spermidine/putrescine ABC transporter substrate-binding protein
[Listeria monocytogenes SLCC2376]
gi|290556721|gb|EFD90255.1| spermidine/putrescine ABC transporter [Listeria monocytogenes FSL
J2-071]
gi|404241409|emb|CBY62809.1| spermidine/putrescine ABC transporter, substrate-binding protein
[Listeria monocytogenes SLCC2376]
Length = 357
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 91/203 (44%), Gaps = 34/203 (16%)
Query: 234 WAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVIVAG----G 289
++ PY WGT+ I Y K F + N + W + PEL +I +++ REV+ G G
Sbjct: 132 YSMPYFWGTLGIIYNKQMFPDKNF---DTWNALFDPELKNQILLIDGAREVMGLGLNSLG 188
Query: 290 KIAVQQNLA-LLANQVRLFDSTHYLKAFGIGD----------VWVAVGWSSDVLPAVKRM 338
N A L A + +L T +KA +GD VAV +S + +
Sbjct: 189 YSLNDTNKAHLQAARDKLETMTPNVKAI-VGDEIKLLMADNEAGVAVTFSGEAAEMLSEN 247
Query: 339 SNVAVVVPKSGASLWADLWAIPAASRLETKQIGGQVRGPSPLIHQWIEFCLQTARALPFK 398
++ V+PK G++LW D IP + K I G H++I F L+ A
Sbjct: 248 EDLEYVIPKDGSNLWFDNMVIPKTA----KNIDGA--------HKFINFMLKPENA-AIN 294
Query: 399 QEVIPGASPSALESTLVKLPEEL 421
E + A+P+ E + LP+E+
Sbjct: 295 AEYVGYATPN--EKAVQLLPKEI 315
>gi|205357017|ref|ZP_02344173.2| putrescine-binding periplasmic protein [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA29]
gi|205324502|gb|EDZ12341.1| putrescine-binding periplasmic protein [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA29]
Length = 371
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 72/165 (43%), Gaps = 29/165 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP K +A PY W T IGY K + + AP+ W PE + +S +++
Sbjct: 125 DPDNK-YAMPYMWATTGIGYNVDKVKAVLGDDAPVNSWDLALKPENLEKLKSCGVSFLDA 183
Query: 281 PREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAV 325
P E+ A +L L L +R F S+ Y+ GD VA+
Sbjct: 184 PEEIFATVLNYLGKDPNSSKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDTCVAI 243
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
GW+ DV A R N++ +PK GA + D++A+PA ++
Sbjct: 244 GWAGDVWQAANRAKEAKNGVNISFSIPKEGAMAFFDVFAMPADAK 288
>gi|117621460|ref|YP_858560.1| spermidine/putrescine ABC transporter periplasmic
spermidine/putrescine-binding protein [Aeromonas
hydrophila subsp. hydrophila ATCC 7966]
gi|117562867|gb|ABK39815.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Aeromonas
hydrophila subsp. hydrophila ATCC 7966]
Length = 361
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 72/162 (44%), Gaps = 27/162 (16%)
Query: 226 EIDPRGKIWAAPYRWGTMAIGYKKSKFQN-HNLAPIEDWKDPWWPELAGR-----ISMVN 279
++DP G +A PY WGT IGY K + + I+ W + PE + ++ ++
Sbjct: 115 KVDP-GHQYAVPYLWGTNGIGYNIDKVKAVLGVDKIDSWAVIFEPENMQKLARCGVAFLD 173
Query: 280 SPREVIVAGGKIA--------------VQQNLALLANQVRLFDSTHYLKAFGIGDVWVAV 325
S E+I A ++ L + V F S+ Y+ GD+ VA
Sbjct: 174 SADEMIPAALNYLGLNPNSQDPADLKRAEEQLLKVRPYVAYFHSSKYIGDLANGDICVAA 233
Query: 326 GWSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIPA 361
G+S D+L A R +A +PK G +LW D+ AIPA
Sbjct: 234 GFSGDILQAAARADEAGKGIKIAYSIPKEGGNLWFDMMAIPA 275
>gi|426412094|ref|YP_007032193.1| putrescine-binding periplasmic protein [Pseudomonas sp. UW4]
gi|426270311|gb|AFY22388.1| putrescine-binding periplasmic protein [Pseudomonas sp. UW4]
Length = 365
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 73/167 (43%), Gaps = 37/167 (22%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN-HNLAPIEDWKDPWWPELAGR-----ISMVNSP 281
DP G ++A PY WGT IGY K + + I+ W + PE + ++ ++S
Sbjct: 121 DP-GNLYAVPYLWGTNGIGYNVDKVKAVLGVDTIDSWGVLFEPENIKKLQSCGVAFLDSA 179
Query: 282 REVIVAGGKIAVQQNLALLANQ-------------------VRLFDSTHYLKAFGIGDVW 322
E++ V + L AN V F S+ Y+ GD+
Sbjct: 180 DEMMPT-----VLNYMGLNANSTDPKDYEKATAKLLAVRPYVTYFHSSKYIADLANGDIC 234
Query: 323 VAVGWSSDVLPA------VKRMSNVAVVVPKSGASLWADLWAIPAAS 363
VA+G+S D+ A K+ N+A +PK G +LW D+ AIP S
Sbjct: 235 VAIGFSGDIFQAKNRAEEAKKGVNIAYSIPKEGGALWFDMLAIPKDS 281
>gi|398892965|ref|ZP_10645887.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM55]
gi|398184856|gb|EJM72287.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM55]
Length = 414
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 95/221 (42%), Gaps = 35/221 (15%)
Query: 235 AAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNSPREVIVA 287
A PY WG++ IG+ K + + AP W + PE A + IS ++SP E+I
Sbjct: 175 AIPYMWGSIGIGFNPQKVKEVLGSNAPTNSWDLLFKPENAEKLKACGISFLDSPTEMIPT 234
Query: 288 G----GKIAVQQNLALLAN----------QVRLFDSTHYLKAFGIGDVWVAVGWSSDVLP 333
G QN +A V F S+ Y+ G++ VAVG+S DVL
Sbjct: 235 ALHYLGYPVNDQNKQHIAEAEALFMKIRPNVAYFHSSKYISDLANGNICVAVGYSGDVLQ 294
Query: 334 AVKRMSN------VAVVVPKSGASLWADLWAIP--AASRLETKQIGGQVRGPSPL--IHQ 383
A R + +PK GA+ + D+ AIP AA+ + P + I
Sbjct: 295 AKARAQEAGNKVKIDYSIPKEGAASFYDMLAIPRDAANVENAYLFMNFLMRPDVIADITN 354
Query: 384 WIEFCLQTARALPFKQEVI---PGAS-PSALESTLVKLPEE 420
I + A A P E I PG+ P A+ +TL +P++
Sbjct: 355 NIGYSNANAAATPLVDEAIRNDPGSYPPEAVMATLYAVPDQ 395
>gi|422300669|ref|ZP_16388180.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas avellanae BPIC 631]
gi|407987082|gb|EKG29964.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas avellanae BPIC 631]
Length = 364
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 72/164 (43%), Gaps = 29/164 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN-HNLAPIEDWKDPWWPELAGRIS---------- 276
DP G +A PY WGT IGY K + + I+ W + PE ++S
Sbjct: 120 DP-GNQYAVPYLWGTNGIGYNVDKVKAVLGVDKIDSWSVLFEPENIKKLSSCGVAFLDSA 178
Query: 277 ------MVN----SPREVIVAGGKIAVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVG 326
M+N SP A K A + LA+ V F S+ Y+ GD+ VA G
Sbjct: 179 DEMLPAMLNYLGLSPNSTNEADYKKAEAKLLAIRP-YVTYFHSSKYITDLANGDICVAAG 237
Query: 327 WSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIPAASR 364
+S DV A R +A +PK G +LW D+ AIPA S+
Sbjct: 238 FSGDVFQAKARAEEAGKGVKLAYSIPKEGGNLWFDMLAIPADSK 281
>gi|422586173|ref|ZP_16661192.1| putrescine ABC transporter periplasmic putrescine-binding protein,
partial [Pseudomonas syringae pv. morsprunorum str.
M302280]
gi|330880486|gb|EGH14635.1| putrescine ABC transporter periplasmic putrescine-binding protein,
partial [Pseudomonas syringae pv. morsprunorum str.
M302280]
Length = 359
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 72/164 (43%), Gaps = 29/164 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN-HNLAPIEDWKDPWWPELAGRIS---------- 276
DP G +A PY WGT IGY K + + I+ W + PE ++S
Sbjct: 120 DP-GNQYAVPYLWGTNGIGYNVDKVKAVLGVDKIDSWSVLFEPENIKKLSSCGVAFLDSA 178
Query: 277 ------MVN----SPREVIVAGGKIAVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVG 326
M+N SP A K A + LA+ V F S+ Y+ GD+ VA G
Sbjct: 179 DEMLPAMLNYLGLSPNSTNEADYKKAEAKLLAIRP-YVTYFHSSKYITDLANGDICVAAG 237
Query: 327 WSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIPAASR 364
+S DV A R +A +PK G +LW D+ AIPA S+
Sbjct: 238 FSGDVFQAKARAEEAGKGVKLAYSIPKEGGNLWFDMLAIPADSK 281
>gi|50121601|ref|YP_050768.1| putrescine ABC transporter periplasmic-binding protein
[Pectobacterium atrosepticum SCRI1043]
gi|49612127|emb|CAG75577.1| putrescine-binding periplasmic protein [Pectobacterium atrosepticum
SCRI1043]
Length = 369
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 71/165 (43%), Gaps = 29/165 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP K +A PY W T IGY K + AP++ W PE + +S +++
Sbjct: 123 DPDNK-YALPYLWATTGIGYNVDKVKAALGADAPVDSWDLVLKPENLEKLKSCGVSFLDA 181
Query: 281 PREVIVA--------------GGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAV 325
P E+ G +L L L +R F S+ Y+ GD+ VAV
Sbjct: 182 PEEIFATVLNYQGKDPNSTKPGDYTTSATDLLLKLRPSIRYFHSSQYINDLANGDICVAV 241
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
GW+ D++ A R N+ +PK GA + D+ AIP ++
Sbjct: 242 GWAGDIMQAGNRAKEAKNGVNIQYSIPKEGALAFFDVLAIPKDAK 286
>gi|409249324|ref|YP_006885156.1| Spermidine/putrescine-binding periplasmic protein SPBP; Flags:
Precursor [Salmonella enterica subsp. enterica serovar
Weltevreden str. 2007-60-3289-1]
gi|416724823|ref|ZP_11845207.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 315731156]
gi|320085152|emb|CBY94939.1| Spermidine/putrescine-binding periplasmic protein SPBP; Flags:
Precursor [Salmonella enterica subsp. enterica serovar
Weltevreden str. 2007-60-3289-1]
gi|323243138|gb|EGA27158.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 315731156]
Length = 353
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 72/165 (43%), Gaps = 29/165 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP K +A PY W T IGY K + + AP+ W PE + +S +++
Sbjct: 107 DPDNK-YAMPYMWATTGIGYNVDKVKAVLGDDAPVNSWDLVLKPENLEKLKSCGVSFLDA 165
Query: 281 PREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAV 325
P E+ A +L L L +R F S+ Y+ GD VA+
Sbjct: 166 PEEIFATVLNYLGKDPNSSKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDTCVAI 225
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
GW+ DV A R N++ +PK GA + D++A+PA ++
Sbjct: 226 GWAGDVWQAANRAKEAKNGVNISFSIPKEGAMAFFDVFAMPADAK 270
>gi|455643997|gb|EMF23118.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Citrobacter freundii GTC 09479]
Length = 370
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 74/168 (44%), Gaps = 29/168 (17%)
Query: 225 GEIDPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISM 277
G+ DP K +A PY W T IGY K + AP++ W PE + +S
Sbjct: 121 GKHDPDNK-FAMPYMWATTGIGYNVDKVKAVLGPDAPVDSWDLILKPENLEKLKSCGVSF 179
Query: 278 VNSPREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVW 322
+++P EV A +L L L +R F S+ Y+ GD
Sbjct: 180 LDAPEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDTC 239
Query: 323 VAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
VA+GW+ DV A R N++ +PK GA + D++A+PA ++
Sbjct: 240 VAIGWAGDVWQAANRAKEAKNGVNISFSIPKEGAMAFFDVFAMPADAK 287
>gi|384919869|ref|ZP_10019899.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Citreicella sp. 357]
gi|384466255|gb|EIE50770.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Citreicella sp. 357]
Length = 361
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 93/215 (43%), Gaps = 44/215 (20%)
Query: 204 DQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIE 261
D+ + + W V S+ + DP G +A Y WGT +G K + + AP+
Sbjct: 94 DKSKLPNIDNMWDVI--SDRTSKYDP-GNEYAINYMWGTTGLGVNLPKVKEILGDDAPVT 150
Query: 262 DWKDPWWPELAGRIS-----MVNSPREVIVAG-------------GKIAVQQNLAL-LAN 302
W + PE +++ +++P E+I A IA + + + + +
Sbjct: 151 SWDLVFKPENMEKLADCGVMFLDAPAEMIPAALNYIGEDPDSHDPDVIAKAEAVYMPIRD 210
Query: 303 QVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADL 356
++ F+S+ Y+ A GD+ VAVGWS DVL A R + +A P GA +W D
Sbjct: 211 HIQKFNSSEYVNALANGDICVAVGWSGDVLQARDRAAEAGNGVEIAYYAPDEGAQMWFDE 270
Query: 357 WAIPAASRLETKQIGGQVRGPSP-LIHQWIEFCLQ 390
AIP V P+P H+++ F +
Sbjct: 271 MAIP-------------VDAPNPEAAHRFLNFIMD 292
>gi|148254930|ref|YP_001239515.1| putrescine ABC transporter periplasmic binding protein
[Bradyrhizobium sp. BTAi1]
gi|146407103|gb|ABQ35609.1| putrescine ABC transporter, periplasmic binding protein
[Bradyrhizobium sp. BTAi1]
Length = 368
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 89/205 (43%), Gaps = 34/205 (16%)
Query: 191 IKKRFIEPIAEAEDQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIGYKKS 250
IK + +P+ D+ L++ W V + DP G +AA Y WGT IGY
Sbjct: 92 IKAKIFQPL----DKTKLPNLANAWPVV--TERLATYDP-GNQFAANYMWGTTGIGYNVK 144
Query: 251 KFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNSPREVIVAG-GKIAVQQN------ 296
+ A I+ W + PE + + M++S ++ A + + N
Sbjct: 145 TIEKILGAGARIDSWDMVFKPENLAKFKDCGVHMLDSADDIFPAALNYLGLDPNSTKQAD 204
Query: 297 -------LALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAV 343
+ +A VR F S+ YL A G++ + VGWS D++ A R +
Sbjct: 205 LEKAAEVVGKVAPSVRKFHSSEYLSALATGEICLVVGWSGDIMQARSRAEEAKNGIEIGY 264
Query: 344 VVPKSGASLWADLWAIPAASRLETK 368
+PK GA ++ D +AIPA ++ T+
Sbjct: 265 AIPKEGAQMFFDNFAIPADAQHVTE 289
>gi|429215499|ref|ZP_19206659.1| putrescine ABC transporter substrate-binding protein [Pseudomonas
sp. M1]
gi|428153906|gb|EKX00459.1| putrescine ABC transporter substrate-binding protein [Pseudomonas
sp. M1]
Length = 361
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 71/160 (44%), Gaps = 27/160 (16%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKF-QNHNLAPIEDWKDPWWPE-----LAGRISMVNSP 281
DP G + PY WGT IGY +K Q + I+ W + PE A ++ ++SP
Sbjct: 117 DP-GNKHSVPYLWGTNGIGYNVAKVKQVLGVDRIDSWAVLFEPENIKKLSACGVAFMDSP 175
Query: 282 REVIVA--------------GGKIAVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGW 327
E+I + + LA + V F S+ Y+ G++ VA G+
Sbjct: 176 DEMIPSVLNYLGLDPNSTNPADYPKAEAKLAAVRPYVTYFHSSKYISDLANGNICVAFGY 235
Query: 328 SSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIPA 361
S DV A R +A +PK GA+LW DL AIP+
Sbjct: 236 SGDVFQAAARAREAKNGIEIAYAIPKEGANLWFDLMAIPS 275
>gi|389841581|ref|YP_006343665.1| putrescine transporter subunit PotF [Cronobacter sakazakii ES15]
gi|424798972|ref|ZP_18224514.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Cronobacter sakazakii 696]
gi|429090151|ref|ZP_19152883.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Cronobacter universalis NCTC 9529]
gi|429109669|ref|ZP_19171439.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Cronobacter malonaticus 507]
gi|429122224|ref|ZP_19182813.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Cronobacter sakazakii 680]
gi|387852057|gb|AFK00155.1| putrescine transporter subunit PotF [Cronobacter sakazakii ES15]
gi|423234693|emb|CCK06384.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Cronobacter sakazakii 696]
gi|426310826|emb|CCJ97552.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Cronobacter malonaticus 507]
gi|426323276|emb|CCK13550.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Cronobacter sakazakii 680]
gi|426509954|emb|CCK17995.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Cronobacter universalis NCTC 9529]
Length = 370
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 78/185 (42%), Gaps = 31/185 (16%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP K +A PY W T IGY K + AP+ W PE + +S +++
Sbjct: 124 DPDNK-YAMPYLWATTGIGYNVDKVKAALGTDAPLNSWDLVLKPENLEKLKSCGVSFLDA 182
Query: 281 PREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAV 325
P E+ A +L L L +R F S+ Y+ GD+ VA+
Sbjct: 183 PEEIFATVLNYLGKDPNSSKADDYSGAATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 242
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIP--AASRLETKQIGGQVRGP 377
GW+ DV A R N++ +PK GA + D++A+P A ++ E Q + P
Sbjct: 243 GWAGDVWQAANRAKEAKNGVNISYTIPKEGALAFFDVFAMPADAKNKDEAYQFLNYLMRP 302
Query: 378 SPLIH 382
+ H
Sbjct: 303 DVMAH 307
>gi|409436131|ref|ZP_11263323.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Rhizobium mesoamericanum STM3625]
gi|408752041|emb|CCM74472.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Rhizobium mesoamericanum STM3625]
Length = 366
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 76/167 (45%), Gaps = 34/167 (20%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDP-----WWPELAGR-----ISM 277
DP G +A Y WGT IGY K K L P D K P + P +A + I +
Sbjct: 121 DP-GNEYAVDYMWGTNGIGYNKKKLA-EVLGP--DAKAPGLEALFDPTVAEKFKDCGIYV 176
Query: 278 VNSPREVIVAG----------GKIAVQQNLALLANQ----VRLFDSTHYLKAFGIGDVWV 323
+++P++VI + K A Q L + VR F S+ Y+ A GD+ +
Sbjct: 177 LDAPKDVIPSALTYLGLDPNSSKPADLQKAGELLEKIRPFVRKFHSSEYINALANGDICI 236
Query: 324 AVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
A G+S D+ A R + + +P GA +W D+ AIPA ++
Sbjct: 237 AFGYSGDIFQAANRATEAKNGVEIGYSIPSQGAQMWFDMMAIPADAK 283
>gi|339487683|ref|YP_004702211.1| extracellular solute-binding protein [Pseudomonas putida S16]
gi|338838526|gb|AEJ13331.1| extracellular solute-binding protein [Pseudomonas putida S16]
Length = 403
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 68/159 (42%), Gaps = 27/159 (16%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQNH-NLAPIEDWKDPWWPELAGR-----ISMVNSP 281
DP G +A PY WGT IGY K + + I+ W + PE + ++ ++SP
Sbjct: 159 DP-GNQYAVPYLWGTNGIGYNIDKVKAALGVDHIDSWAVLFEPENLKKLKQCGVAFMDSP 217
Query: 282 REVIVA--------------GGKIAVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGW 327
E+ A + L L + F S+ Y+ GDV VA G+
Sbjct: 218 DELFPAVLNYLGMNPRSEKPADYAKAEARLLELRPYITYFHSSKYVSDLANGDVCVAFGY 277
Query: 328 SSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIP 360
S DV A R +A +PK G++LW DL AIP
Sbjct: 278 SGDVFQAANRAVEAKNGVKIAYSIPKEGSNLWFDLLAIP 316
>gi|395227557|ref|ZP_10405883.1| putrescine ABC transporter periplasmic substrate-binding protein
[Citrobacter sp. A1]
gi|421844409|ref|ZP_16277567.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Citrobacter freundii ATCC 8090 = MTCC
1658]
gi|424728739|ref|ZP_18157344.1| putrescine abc transporter periplasmic substrate-binding protein
[Citrobacter sp. L17]
gi|394718885|gb|EJF24506.1| putrescine ABC transporter periplasmic substrate-binding protein
[Citrobacter sp. A1]
gi|411774564|gb|EKS58054.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Citrobacter freundii ATCC 8090 = MTCC
1658]
gi|422896610|gb|EKU36392.1| putrescine abc transporter periplasmic substrate-binding protein
[Citrobacter sp. L17]
Length = 370
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 74/168 (44%), Gaps = 29/168 (17%)
Query: 225 GEIDPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISM 277
G+ DP K +A PY W T IGY K + AP++ W PE + +S
Sbjct: 121 GKHDPDNK-FAMPYMWATTGIGYNVDKVKAVLGPDAPVDSWDLILKPENLEKLKSCGVSF 179
Query: 278 VNSPREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVW 322
+++P EV A +L L L +R F S+ Y+ GD
Sbjct: 180 LDAPEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDTC 239
Query: 323 VAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
VA+GW+ DV A R N++ +PK GA + D++A+PA ++
Sbjct: 240 VAIGWAGDVWQAANRAKEAKNGVNISFSIPKEGAMAFFDVFAMPADAK 287
>gi|423107544|ref|ZP_17095239.1| putrescine-binding periplasmic protein [Klebsiella oxytoca 10-5243]
gi|376388316|gb|EHT01015.1| putrescine-binding periplasmic protein [Klebsiella oxytoca 10-5243]
Length = 370
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 73/165 (44%), Gaps = 29/165 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP K +A PY W T IGY K + AP++ W PE + +S +++
Sbjct: 124 DPDNK-YAIPYLWATTGIGYNIDKVKAVLGKDAPLDSWDLVMKPENLEKLKSCGVSFLDA 182
Query: 281 PREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAV 325
P E+ A +L L L +R F S+ Y+ GD+ VA+
Sbjct: 183 PEEIFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 242
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 243 GWAGDVWQAANRAKEAKNGVNVSYFIPKEGALAFFDVFAMPADAK 287
>gi|423113485|ref|ZP_17101176.1| putrescine-binding periplasmic protein [Klebsiella oxytoca 10-5245]
gi|376388854|gb|EHT01547.1| putrescine-binding periplasmic protein [Klebsiella oxytoca 10-5245]
Length = 370
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 79/185 (42%), Gaps = 31/185 (16%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP K +A PY W T IGY K + AP++ W PE + +S +++
Sbjct: 124 DPDNK-YAIPYLWATTGIGYNIDKVKAVLGKDAPLDSWDLVMKPENLEKLKSCGVSFLDA 182
Query: 281 PREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAV 325
P E+ A +L L L +R F S+ Y+ GD+ VA+
Sbjct: 183 PEEIFATVLNYLGKDPNSAKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 242
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIP--AASRLETKQIGGQVRGP 377
GW+ DV A R NV+ +PK GA + D++A+P A ++ E Q + P
Sbjct: 243 GWAGDVWQAANRAKEAKNGVNVSYFIPKEGALAFFDVFAMPADAKNKEEAYQFLNYLMRP 302
Query: 378 SPLIH 382
+ H
Sbjct: 303 DVIAH 307
>gi|315281477|ref|ZP_07870095.1| spermidine/putrescine-binding periplasmic protein 2 [Listeria
marthii FSL S4-120]
gi|313614877|gb|EFR88403.1| spermidine/putrescine-binding periplasmic protein 2 [Listeria
marthii FSL S4-120]
Length = 357
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 91/203 (44%), Gaps = 34/203 (16%)
Query: 234 WAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVIVAG----G 289
++ PY WGT+ I Y K F + N + W + PEL +I +++ REV+ G G
Sbjct: 132 YSMPYFWGTLGIIYNKEMFPDKNF---DTWNALFDPELKNQILLIDGAREVMGLGLNSLG 188
Query: 290 KIAVQQNLA-LLANQVRLFDSTHYLKAFGIGD----------VWVAVGWSSDVLPAVKRM 338
N A L A + +L T +KA +GD VAV +S + +
Sbjct: 189 YSLNDTNKAHLQAARDKLETMTPNVKAI-VGDEIKLLMADNEAGVAVTFSGEAAEMLSEN 247
Query: 339 SNVAVVVPKSGASLWADLWAIPAASRLETKQIGGQVRGPSPLIHQWIEFCLQTARALPFK 398
++ V+PK G++LW D IP + K + G H++I F L+ A
Sbjct: 248 EDLEYVIPKDGSNLWFDNMVIPKTA----KNVDGA--------HKFINFMLKPENA-AIN 294
Query: 399 QEVIPGASPSALESTLVKLPEEL 421
E + A+P+A L LP+E+
Sbjct: 295 AEYVGYATPNAKAVQL--LPKEI 315
>gi|410089930|ref|ZP_11286537.1| spermidine/putrescine ABC transporter substrate-binding protein
[Pseudomonas viridiflava UASWS0038]
gi|409762797|gb|EKN47796.1| spermidine/putrescine ABC transporter substrate-binding protein
[Pseudomonas viridiflava UASWS0038]
Length = 364
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 93/219 (42%), Gaps = 46/219 (21%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQNH-NLAPIEDWKDPWWPELAGRIS---------- 276
DP G +A PY WGT IGY K + + I+ W + PE ++S
Sbjct: 120 DP-GNQYAVPYLWGTNGIGYNVEKVKAALGVDKIDSWSVLFEPENIKKLSSCGVAFLDSA 178
Query: 277 ------MVN----SPREVIVAGGKIAVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVG 326
M+N P A K A + L + V F S+ Y+ GD+ VA G
Sbjct: 179 DEMLPAMLNYLGLDPNSTKEADYKKA-EAKLMAIRPYVTYFHSSKYITDLANGDICVAAG 237
Query: 327 WSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIPAASR------------LETK 368
+S DV A R +A +PK G +LW D+ AIPA S+ L+ K
Sbjct: 238 FSGDVFQAKARAEEAGKGVKLAYSIPKEGGNLWFDMLAIPADSKNVKAASAFINYLLDPK 297
Query: 369 ---QIGGQV--RGPSPLIHQWIEFCLQTARALPFKQEVI 402
Q+ +V P+P ++++ ++T A+ QEV+
Sbjct: 298 VIAQVSDEVGYANPNPASGEFMDQAIRTDEAVYPPQEVL 336
>gi|152999700|ref|YP_001365381.1| extracellular solute-binding protein [Shewanella baltica OS185]
gi|151364318|gb|ABS07318.1| extracellular solute-binding protein family 1 [Shewanella baltica
OS185]
Length = 366
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 73/163 (44%), Gaps = 28/163 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYK--KSKFQNHNLAPIEDWKDPWWPELAGRIS-----MVNS 280
DP G +A PY WGT IGY K K AP + + P+ A +IS M++S
Sbjct: 121 DP-GNQYAVPYLWGTNGIGYNIDKVKAAVGEDAPFNSMELIFNPKYAEKISKCGFAMLDS 179
Query: 281 -----PREVIVAG---------GKIAVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVG 326
P+ +I G + L ++ V F S+ Y+ GD+ VA G
Sbjct: 180 ADDMVPQALIYLGLDPNSSNPSDYEKAGELLEIIRPYVTYFHSSRYISDLANGDICVAFG 239
Query: 327 WSSDVLPAVKRM------SNVAVVVPKSGASLWADLWAIPAAS 363
+S DV A R + + +PK GA+LW D+ AIPA S
Sbjct: 240 FSGDVFQAKARAEEAGNGNKIGYSIPKEGANLWFDMLAIPADS 282
>gi|407363925|ref|ZP_11110457.1| Periplasmic polyamine-binding protein, putative [Pseudomonas
mandelii JR-1]
Length = 367
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 71/157 (45%), Gaps = 26/157 (16%)
Query: 231 GKIWAAPYRWGTMAIGYKKSKFQNHN-LAPIEDWKDPWWPELAGR-----ISMVNSPREV 284
G +++APY WG+ I Y K + API + P++ R +++V++P EV
Sbjct: 125 GTLYSAPYTWGSNGITYNVDKIKERMPDAPIGSLAMIFDPKIVSRFADCGVTLVDAPTEV 184
Query: 285 IVAGGKI--------------AVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSD 330
I K A Q L + +R FDS +YL + GDV +A+ WS D
Sbjct: 185 IPLALKYLGRDPRSAAPEDLKAAQDLLLSVRPYIRKFDSVNYLTSLPNGDVCMAMTWSGD 244
Query: 331 VLPAVKRMSN------VAVVVPKSGASLWADLWAIPA 361
A+ R +A +PK G+ +W D IPA
Sbjct: 245 YATAMARAEEAKLKIKLAYFIPKEGSLIWFDNLYIPA 281
>gi|311280262|ref|YP_003942493.1| extracellular solute-binding protein [Enterobacter cloacae SCF1]
gi|308749457|gb|ADO49209.1| extracellular solute-binding protein family 1 [Enterobacter cloacae
SCF1]
Length = 370
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 72/165 (43%), Gaps = 29/165 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP K +A PY W T IGY K + AP+ W PE + +S +++
Sbjct: 124 DPENK-YAMPYMWATTGIGYNVDKVKAVLGKDAPVNSWDLVMKPENLQKLKSCGVSFLDA 182
Query: 281 PREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAV 325
P E+ A +L L L +R F S+ Y+ GD+ VA+
Sbjct: 183 PEEIFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPDIRYFHSSQYINDLANGDICVAI 242
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
GW+ DV A R N++ +PK GA + D++A+PA ++
Sbjct: 243 GWAGDVWQAANRAKEAKNGVNISYSIPKEGALAFFDVFAMPADAK 287
>gi|418853425|ref|ZP_13408114.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19593]
gi|392826686|gb|EJA82407.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19593]
Length = 370
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 72/165 (43%), Gaps = 29/165 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPE-----LAGRISMVNS 280
DP K +A PY W T IGY K + + AP+ W PE + +S +++
Sbjct: 124 DPDNK-YAMPYMWATTGIGYNVDKVKAVLGDDAPVNSWDLVLKPENLEKLKSCDVSFLDA 182
Query: 281 PREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAV 325
P E+ A +L L L +R F S+ Y+ GD VA+
Sbjct: 183 PEEIFATVLNYLDKDPNSSKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDTCVAI 242
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
GW+ DV A R N++ +PK GA + D++A+PA ++
Sbjct: 243 GWAGDVWQAANRAKEAKNGVNISFSIPKEGAMAFFDVFAMPADAK 287
>gi|397657008|ref|YP_006497710.1| putrescine ABC transporter putrescine-binding protein PotF
[Klebsiella oxytoca E718]
gi|394345525|gb|AFN31646.1| Putrescine ABC transporter putrescine-binding protein PotF
[Klebsiella oxytoca E718]
Length = 370
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 86/207 (41%), Gaps = 33/207 (15%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP K +A PY W T IGY K + AP++ W PE + +S +++
Sbjct: 124 DPDNK-YAIPYLWATTGIGYNIDKVKAVLGKDAPLDSWDLVMKPENLEKLKSCGVSFLDA 182
Query: 281 PREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAV 325
P E+ A +L L L +R F S+ Y+ GD+ VA+
Sbjct: 183 PEEIFATLLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 242
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIP--AASRLETKQIGGQVRGP 377
GW+ DV A R NV+ +PK GA + D++A+P A ++ E Q + P
Sbjct: 243 GWAGDVWQAANRAKEAKNGVNVSYYIPKEGALAFFDVFAMPADAKNKDEAYQFLNYLMRP 302
Query: 378 SPLIH--QWIEFCLQTARALPFKQEVI 402
+ H + + ++P E I
Sbjct: 303 EVIAHISDHVYYANGNKASVPLVSEAI 329
>gi|90423608|ref|YP_531978.1| extracellular solute-binding protein [Rhodopseudomonas palustris
BisB18]
gi|90105622|gb|ABD87659.1| extracellular solute-binding protein, family 1 [Rhodopseudomonas
palustris BisB18]
Length = 371
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 90/204 (44%), Gaps = 30/204 (14%)
Query: 188 SFAIKKRFIEPIAEAEDQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIGY 247
++ ++++ I + D+ L + W V + DP G +AA Y WGT IGY
Sbjct: 88 AYFLQRQIAANIFQKLDKAKLPNLGNAWDVVTKR--LATYDP-GNRFAANYMWGTTGIGY 144
Query: 248 KKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNSPREVIVAG----------GK 290
+ + A I+ W + PE + + M++SP +++ A K
Sbjct: 145 NVAAVRKILGEGAVIDSWATVFKPENLAKFTECGVHMLDSPDDILPAALTYLGLDPNSTK 204
Query: 291 IAVQQNLALLANQ----VRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------N 340
A + A L + VR F S+ YL A G++ + V WS D++ A R +
Sbjct: 205 PADLEKAADLVGKIRPYVRKFHSSEYLNALATGEICLVVAWSGDIMQARSRTAEANNGVE 264
Query: 341 VAVVVPKSGASLWADLWAIPAASR 364
+ +PK GA ++ D AIPA ++
Sbjct: 265 IGYSIPKEGAQMFFDNLAIPADAK 288
>gi|398844426|ref|ZP_10601490.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM84]
gi|398254512|gb|EJN39605.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM84]
Length = 362
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 71/167 (42%), Gaps = 33/167 (19%)
Query: 226 EIDPRGKIWAAPYRWGTMAIGYKKSK----------------FQNHNLAPIE-------D 262
E DP G +A PY WGT IGY K F+ NL ++ D
Sbjct: 116 ENDP-GNKYAVPYLWGTNGIGYNVEKVKAVLGIDKVDSWAVLFEPKNLEKLKQCGVAFMD 174
Query: 263 WKDPWWPELAGRISMVNSPREVIVAGGKIAVQQNLALLANQVRLFDSTHYLKAFGIGDVW 322
D +P + + M +PR +A A + L L V F S+ Y+ G++
Sbjct: 175 SPDELFPAMLNYLGM--NPRSENLADYAKA-EARLMELRPSVTYFHSSKYISDLANGNIC 231
Query: 323 VAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIPAAS 363
VA G+S DV A R +A +PK GA++W DL A+P S
Sbjct: 232 VAFGYSGDVFQAASRAQEAKNGVKIAYSIPKEGANIWFDLLAVPKDS 278
>gi|114331324|ref|YP_747546.1| extracellular solute-binding protein [Nitrosomonas eutropha C91]
gi|114308338|gb|ABI59581.1| extracellular solute-binding protein, family 1 [Nitrosomonas
eutropha C91]
Length = 369
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 85/189 (44%), Gaps = 40/189 (21%)
Query: 227 IDPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPE----LAGRISMVNSPR 282
DP + ++ PY + T IG+ + K NL P + W + PE + GRI++++S R
Sbjct: 128 FDPDNR-YSVPYAYTTTLIGFNREKLAELNL-PTDSWAIIFEPEYLKKIKGRITVLDSQR 185
Query: 283 EVIVAGGKIAV-----------QQNLALLANQV---RLFDSTHYLKAFGIGDVWVAVGWS 328
E++ A K QQ AL+ F +T Y++ IG++WVA G+S
Sbjct: 186 ELMAAALKYLGYSASDTDENHWQQAKALIIRAKPYWAAFSNTSYIRELAIGNLWVAHGYS 245
Query: 329 SDVLPA------VKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGQVRGPSP-LI 381
+D+ A R +V V+P+ GA L D + + G P L
Sbjct: 246 NDMYQAALDAKKTGRRFSVDFVIPREGAVLSLDSMVLHHS-------------GHRPDLA 292
Query: 382 HQWIEFCLQ 390
H++I F L+
Sbjct: 293 HRFINFMLE 301
>gi|437473908|ref|ZP_20766015.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 642044 4-1]
gi|435224831|gb|ELO06780.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 642044 4-1]
Length = 383
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 72/165 (43%), Gaps = 29/165 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP K +A PY W T IGY K + + AP+ W PE + +S +++
Sbjct: 137 DPDNK-YAMPYMWATTGIGYNVDKVKAVLGDDAPVNSWDLVLKPENLEKLKSCGVSFLDA 195
Query: 281 PREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAV 325
P E+ A +L L L +R F S+ Y+ GD VA+
Sbjct: 196 PEEIFATVLNYLGKDPNSSKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDTCVAI 255
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
GW+ DV A R N++ +PK GA + D++A+PA ++
Sbjct: 256 GWAGDVWQAANRAKEAKNGVNISFSIPKEGAMAFFDVFAMPADAK 300
>gi|75908519|ref|YP_322815.1| extracellular solute-binding protein [Anabaena variabilis ATCC
29413]
gi|75702244|gb|ABA21920.1| extracellular solute-binding protein, family 1 [Anabaena variabilis
ATCC 29413]
Length = 360
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 82/179 (45%), Gaps = 33/179 (18%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPE--LAGRISMVNSPREVI 285
DP+ + ++ P+ WGT + Y + AP EDW+ W + L+ RI+++N REVI
Sbjct: 132 DPKNR-YSIPFNWGTTGLIYNSEILKE---AP-EDWEYLWKNQKLLSKRITLLNDVREVI 186
Query: 286 VAGGKI--------------AVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDV 331
A ++ + L+ L + FD+ + GD+ +A+ +S+D
Sbjct: 187 GAVLRMLGYSYNSQNEAQIKQAYEKLSTLKPAIAAFDTDAWRNQILAGDLALAMCYSADA 246
Query: 332 LPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGQVRGPSPLIHQWIEFCLQ 390
+K + V+P+SG+SLW D IP ++ + G + WI F LQ
Sbjct: 247 TKVIKENPKLKYVIPRSGSSLWTDTIVIPKSA----PNLDGA--------YAWINFILQ 293
>gi|402842571|ref|ZP_10890983.1| putrescine-binding periplasmic protein [Klebsiella sp. OBRC7]
gi|423102198|ref|ZP_17089900.1| putrescine-binding periplasmic protein [Klebsiella oxytoca 10-5242]
gi|376390094|gb|EHT02781.1| putrescine-binding periplasmic protein [Klebsiella oxytoca 10-5242]
gi|402279513|gb|EJU28298.1| putrescine-binding periplasmic protein [Klebsiella sp. OBRC7]
Length = 370
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 86/207 (41%), Gaps = 33/207 (15%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP K +A PY W T IGY K + AP++ W PE + +S +++
Sbjct: 124 DPDNK-YAIPYLWATTGIGYNIDKVKAVLGKDAPLDSWDLVMKPENLEKLKSCGVSFLDA 182
Query: 281 PREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAV 325
P E+ A +L L L +R F S+ Y+ GD+ VA+
Sbjct: 183 PEEIFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 242
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIP--AASRLETKQIGGQVRGP 377
GW+ DV A R NV+ +PK GA + D++A+P A ++ E Q + P
Sbjct: 243 GWAGDVWQAANRAKEAKNGVNVSYYIPKEGALAFFDVFAMPADAKNKDEAYQFLNYLMRP 302
Query: 378 SPLIH--QWIEFCLQTARALPFKQEVI 402
+ H + + ++P E I
Sbjct: 303 DVIAHISDHVYYANGNKASVPLVSEAI 329
>gi|312960500|ref|ZP_07775007.1| extracellular solute-binding protein, family 1 [Pseudomonas
fluorescens WH6]
gi|311285234|gb|EFQ63808.1| extracellular solute-binding protein, family 1 [Pseudomonas
fluorescens WH6]
Length = 362
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 75/180 (41%), Gaps = 32/180 (17%)
Query: 208 FKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIGYKKSKF-QNHNLAPIEDWKDP 266
FK L K L ND G + PY WGT IGY K Q + I+ W
Sbjct: 103 FKNLDPKLLALLEKNDPGNAH------SVPYLWGTNGIGYNVDKVKQVLGIDHIDSWAVL 156
Query: 267 WWPELAGR-----ISMVNSPREVIVA----GGKI----------AVQQNLALLANQVRLF 307
+ P+ + ++ ++S E+ A GK + L L + F
Sbjct: 157 FEPQNIKKLNQCGVAFLDSADELFPAILNYMGKDPRSEDPKDYQEAEAKLLTLRPYITYF 216
Query: 308 DSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPA 361
S+ Y+ G++ VA G+S DV A R N+A +PK G++LW DL AIPA
Sbjct: 217 HSSKYISDLANGNICVAFGYSGDVFQAANRAKEAKNGVNIAYSIPKEGSNLWFDLLAIPA 276
>gi|170722071|ref|YP_001749759.1| extracellular solute-binding protein [Pseudomonas putida W619]
gi|169760074|gb|ACA73390.1| extracellular solute-binding protein family 1 [Pseudomonas putida
W619]
Length = 362
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 69/159 (43%), Gaps = 27/159 (16%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQNH-NLAPIEDWKDPWWPELAGR-----ISMVNSP 281
DP G +A PY WGT IGY K + + I+ W + PE + ++ ++SP
Sbjct: 118 DP-GNQYAVPYLWGTNGIGYNVEKVKAALGIERIDSWAVLFEPENLKKLKQCGVAFMDSP 176
Query: 282 REVIVA--------------GGKIAVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGW 327
E+ A + +L L + F S+ Y+ GD+ +A G+
Sbjct: 177 DELFPAMLNYLGMDPRSEKPADYAKAEAHLLELRPYITYFHSSKYVSDLANGDICIAFGY 236
Query: 328 SSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIP 360
S DV A R +A +PK G++LW DL AIP
Sbjct: 237 SGDVFQAANRSVEAKNGVKIAYSIPKEGSNLWFDLLAIP 275
>gi|407362357|ref|ZP_11108889.1| extracellular solute-binding protein [Pseudomonas mandelii JR-1]
Length = 365
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 97/220 (44%), Gaps = 35/220 (15%)
Query: 235 AAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNSPREVIVA 287
A PY WG++ IG+ +K ++ AP W + PE A + IS ++SP E++ A
Sbjct: 126 AFPYMWGSIGIGFNPAKVKDVLGANAPTNSWDLLFKPENAEKLKACGISFLDSPTEMLPA 185
Query: 288 G----GKIAVQQNLALLAN----------QVRLFDSTHYLKAFGIGDVWVAVGWSSDVLP 333
G Q+ A +A V F S+ Y+ G++ VAVG+S DVL
Sbjct: 186 ALHYLGYPVNSQDKAQIAEAEALFMKIRPSVAYFHSSKYISDLANGNICVAVGYSGDVLQ 245
Query: 334 AVKRMSN------VAVVVPKSGASLWADLWAIPA-ASRLETKQIGGQVRGPSPLIHQW-- 384
A R + +PK GA + D+ AIP A+ +E + +I +
Sbjct: 246 AKARAQEAGNKVKIDYSIPKEGAGSFYDMVAIPKDAANVENAYLFMNFLMRPDIIAEITN 305
Query: 385 -IEFCLQTARALPFKQEVI---PGAS-PSALESTLVKLPE 419
I + A A P E I PG+ P A+ +TL +P+
Sbjct: 306 NIGYSNANAAATPLVDEAIRDDPGSYPPQAVMATLYAIPD 345
>gi|398871854|ref|ZP_10627162.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM74]
gi|398204929|gb|EJM91722.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM74]
Length = 365
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 98/221 (44%), Gaps = 35/221 (15%)
Query: 235 AAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNSPREVIVA 287
A PY WG++ IG+ +K + AP W + PE A + IS ++SP E+I
Sbjct: 126 AIPYMWGSIGIGFNPAKVKEVLGANAPTNSWDLLFKPENAEKLKACGISFLDSPTEMIPT 185
Query: 288 G----GKIAVQQNLALLAN----------QVRLFDSTHYLKAFGIGDVWVAVGWSSDVLP 333
G QN +A V F S+ Y+ G++ VAVG+S DVL
Sbjct: 186 ALHYLGYPVNDQNKQHIAEAQALFMRIRPNVAYFHSSKYISDLANGNICVAVGYSGDVLQ 245
Query: 334 AVKRMSN------VAVVVPKSGASLWADLWAIP-AASRLETKQIGGQ-VRGPSPL--IHQ 383
A R + +PK GA+ + D+ AIP A+ +E + + + P + I
Sbjct: 246 AKARAQEAGDKVKIDYSIPKEGAASFYDMLAIPRDAANVENAYLFMKFLMRPDVIADITN 305
Query: 384 WIEFCLQTARALPFKQEVI---PGAS-PSALESTLVKLPEE 420
I + A A P E I PG+ P A+ +TL +P++
Sbjct: 306 NIGYSNANAAATPLVDEAIRNDPGSYPPEAVMATLYAVPDQ 346
>gi|415771503|ref|ZP_11485362.1| putrescine-binding periplasmic protein [Escherichia coli 3431]
gi|315619861|gb|EFV00380.1| putrescine-binding periplasmic protein [Escherichia coli 3431]
Length = 370
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 73/165 (44%), Gaps = 29/165 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP K +A PY W T IGY K + AP++ W PE + +S +++
Sbjct: 124 DPDNK-FAMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDA 182
Query: 281 PREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAV 325
P EV A +L L L +R F S+ Y+ GD+ VA+
Sbjct: 183 PEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 242
Query: 326 GWSSDVLPA------VKRMSNVAVVVPKSGASLWADLWAIPAASR 364
GW+ DV A K NV+ +PK GA + D++A+PA ++
Sbjct: 243 GWAGDVWQASNCAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|163751564|ref|ZP_02158786.1| polyamine ABC transporter, periplasmic polyamine-binding protein
[Shewanella benthica KT99]
gi|161328572|gb|EDP99725.1| polyamine ABC transporter, periplasmic polyamine-binding protein
[Shewanella benthica KT99]
Length = 366
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 76/165 (46%), Gaps = 30/165 (18%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGRIS-----MVNS 280
DP+ K +A PY WGT IGY K + P + + + P+ A +IS M++S
Sbjct: 121 DPQNK-FAVPYLWGTTGIGYNLEKVKAVLGEEPPFDSLELLFNPKYAEKISSCGFSMMDS 179
Query: 281 PREVIVAG---------------GKIAVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAV 325
E++ K+A + +A + V F S+ Y+ GD+ VA
Sbjct: 180 ADEMMSQALTYLKLDPNSTNPDDYKLA-GEAIAKVRPYVTYFHSSRYIIDLANGDICVAF 238
Query: 326 GWSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIPAASR 364
G+S D+ A R ++ +PK GA+LW D+ AIPA ++
Sbjct: 239 GYSGDIFQAAARAEEADNGQVISYAIPKEGANLWFDMLAIPADAK 283
>gi|146311026|ref|YP_001176100.1| putrescine ABC transporter periplasmic-binding protein
[Enterobacter sp. 638]
gi|145317902|gb|ABP60049.1| extracellular solute-binding protein, family 1 [Enterobacter sp.
638]
Length = 370
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 71/165 (43%), Gaps = 29/165 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP K +A PY W T IGY K + P++ W PE + +S +++
Sbjct: 124 DPDNK-YALPYLWATTGIGYNVDKVKKALGTDVPLDSWDMVLKPENLAKLKSCGVSFLDA 182
Query: 281 PREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAV 325
P E+ A +L L L +R F S+ Y+ GD+ VA+
Sbjct: 183 PEEIFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 242
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
GW+ DV A R NV +PK GA + D++A+PA ++
Sbjct: 243 GWAGDVWQAANRAKEAKNGVNVTYTIPKEGALAFFDVFAMPADAK 287
>gi|375259929|ref|YP_005019099.1| putrescine ABC transporter periplasmic-binding protein [Klebsiella
oxytoca KCTC 1686]
gi|365909407|gb|AEX04860.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella oxytoca KCTC 1686]
Length = 370
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 86/207 (41%), Gaps = 33/207 (15%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP K +A PY W T IGY K + AP++ W PE + +S +++
Sbjct: 124 DPDNK-YAIPYLWATTGIGYNIDKVKAVLGKDAPLDSWDLVMKPENLEKLKSCGVSFLDA 182
Query: 281 PREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAV 325
P E+ A +L L L +R F S+ Y+ GD+ VA+
Sbjct: 183 PEEIFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 242
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIP--AASRLETKQIGGQVRGP 377
GW+ DV A R NV+ +PK GA + D++A+P A ++ E Q + P
Sbjct: 243 GWAGDVWQAANRAKEAKNGVNVSYYIPKEGALAFFDVFAMPADAKNKDEAYQFLNYLMRP 302
Query: 378 SPLIH--QWIEFCLQTARALPFKQEVI 402
+ H + + ++P E I
Sbjct: 303 EVIAHISDHVYYANGNKASVPLVSEAI 329
>gi|47093931|ref|ZP_00231669.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Listeria
monocytogenes str. 4b H7858]
gi|417314873|ref|ZP_12101566.1| extracellular solute-binding protein family 1 [Listeria
monocytogenes J1816]
gi|422412245|ref|ZP_16489204.1| spermidine/putrescine-binding periplasmic protein 2 [Listeria
innocua FSL S4-378]
gi|422415289|ref|ZP_16492246.1| spermidine/putrescine-binding periplasmic protein PotD [Listeria
innocua FSL J1-023]
gi|422808896|ref|ZP_16857307.1| ABC transporter, periplasmic spermidine putrescine-binding protein
PotD [Listeria monocytogenes FSL J1-208]
gi|47017691|gb|EAL08486.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Listeria
monocytogenes str. 4b H7858]
gi|313619899|gb|EFR91458.1| spermidine/putrescine-binding periplasmic protein 2 [Listeria
innocua FSL S4-378]
gi|313624594|gb|EFR94576.1| spermidine/putrescine-binding periplasmic protein PotD [Listeria
innocua FSL J1-023]
gi|328467360|gb|EGF38440.1| extracellular solute-binding protein family 1 [Listeria
monocytogenes J1816]
gi|378752510|gb|EHY63095.1| ABC transporter, periplasmic spermidine putrescine-binding protein
PotD [Listeria monocytogenes FSL J1-208]
Length = 357
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 91/203 (44%), Gaps = 34/203 (16%)
Query: 234 WAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVIVAG----G 289
++ PY WGT+ I Y K F + N + W + PEL +I +++ REV+ G G
Sbjct: 132 YSMPYFWGTLGIIYNKEMFPDKNF---DTWNALFDPELKNQILLIDGAREVMGLGLNSLG 188
Query: 290 KIAVQQNLA-LLANQVRLFDSTHYLKAFGIGD----------VWVAVGWSSDVLPAVKRM 338
N A L A + +L T +KA +GD VAV +S + +
Sbjct: 189 YSLNDTNKAHLQAARDKLETMTPNVKAI-VGDEIKLLMADNEAGVAVTFSGEAAEMLSEN 247
Query: 339 SNVAVVVPKSGASLWADLWAIPAASRLETKQIGGQVRGPSPLIHQWIEFCLQTARALPFK 398
++ V+PK G++LW D IP + K + G H++I F L+ A
Sbjct: 248 EDLEYVIPKDGSNLWFDNMVIPKTA----KNVDGA--------HKFINFMLKPENA-AIN 294
Query: 399 QEVIPGASPSALESTLVKLPEEL 421
E + A+P+ E + LP+E+
Sbjct: 295 AEYVGYATPN--EKAVKLLPKEI 315
>gi|417528396|ref|ZP_12185034.1| Putrescine ABC transporter putrescine-binding protein PotF, partial
[Salmonella enterica subsp. enterica serovar Urbana str.
R8-2977]
gi|353668092|gb|EHD05386.1| Putrescine ABC transporter putrescine-binding protein PotF, partial
[Salmonella enterica subsp. enterica serovar Urbana str.
R8-2977]
Length = 340
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 72/165 (43%), Gaps = 29/165 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP K +A PY W T IGY K + + AP+ W PE + +S +++
Sbjct: 125 DPDNK-YAMPYMWATTGIGYNVDKVKAVLGDDAPVNSWDLVLKPENLEKLKSCGVSFLDA 183
Query: 281 PREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAV 325
P E+ A +L L L +R F S+ Y+ GD VA+
Sbjct: 184 PEEIFATVLNYLGKDPNSSKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDTCVAI 243
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
GW+ DV A R N++ +PK GA + D++A+PA ++
Sbjct: 244 GWAGDVWQAANRAKEAKNGVNISFSIPKEGAMAFFDVFAMPADAK 288
>gi|417389662|ref|ZP_12153396.1| Putrescine ABC transporter putrescine-binding protein PotF, partial
[Salmonella enterica subsp. enterica serovar Minnesota
str. A4-603]
gi|353621258|gb|EHC71130.1| Putrescine ABC transporter putrescine-binding protein PotF, partial
[Salmonella enterica subsp. enterica serovar Minnesota
str. A4-603]
Length = 339
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 72/165 (43%), Gaps = 29/165 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP K +A PY W T IGY K + + AP+ W PE + +S +++
Sbjct: 125 DPDNK-YAMPYMWATTGIGYNVDKVKAVLGDDAPVNSWDLVLKPENLEKLKSCGVSFLDA 183
Query: 281 PREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAV 325
P E+ A +L L L +R F S+ Y+ GD VA+
Sbjct: 184 PEEIFATVLNYLGKDPNSSKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDTCVAI 243
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
GW+ DV A R N++ +PK GA + D++A+PA ++
Sbjct: 244 GWAGDVWQAANRAKEAKNGVNISFSIPKEGAMAFFDVFAMPADAK 288
>gi|417347886|ref|ZP_12126976.1| Putrescine ABC transporter putrescine-binding protein potF, partial
[Salmonella enterica subsp. enterica serovar Gaminara
str. A4-567]
gi|417517138|ref|ZP_12179859.1| Putrescine ABC transporter putrescine-binding protein potF, partial
[Salmonella enterica subsp. enterica serovar Uganda str.
R8-3404]
gi|417538032|ref|ZP_12190746.1| Putrescine ABC transporter putrescine-binding protein PotF, partial
[Salmonella enterica subsp. enterica serovar Wandsworth
str. A4-580]
gi|353577100|gb|EHC39369.1| Putrescine ABC transporter putrescine-binding protein potF, partial
[Salmonella enterica subsp. enterica serovar Gaminara
str. A4-567]
gi|353652358|gb|EHC94212.1| Putrescine ABC transporter putrescine-binding protein potF, partial
[Salmonella enterica subsp. enterica serovar Uganda str.
R8-3404]
gi|353667371|gb|EHD04907.1| Putrescine ABC transporter putrescine-binding protein PotF, partial
[Salmonella enterica subsp. enterica serovar Wandsworth
str. A4-580]
Length = 339
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 72/165 (43%), Gaps = 29/165 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP K +A PY W T IGY K + + AP+ W PE + +S +++
Sbjct: 125 DPDNK-YAMPYMWATTGIGYNVDKVKAVLGDDAPVNSWDLVLKPENLEKLKSCGVSFLDA 183
Query: 281 PREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAV 325
P E+ A +L L L +R F S+ Y+ GD VA+
Sbjct: 184 PEEIFATVLNYLGKDPNSSKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDTCVAI 243
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
GW+ DV A R N++ +PK GA + D++A+PA ++
Sbjct: 244 GWAGDVWQAANRAKEAKNGVNISFSIPKEGAMAFFDVFAMPADAK 288
>gi|417325284|ref|ZP_12111298.1| Putrescine ABC transporter putrescine-binding protein PotF, partial
[Salmonella enterica subsp. enterica serovar Adelaide
str. A4-669]
gi|353576540|gb|EHC38965.1| Putrescine ABC transporter putrescine-binding protein PotF, partial
[Salmonella enterica subsp. enterica serovar Adelaide
str. A4-669]
Length = 347
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 72/165 (43%), Gaps = 29/165 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP K +A PY W T IGY K + + AP+ W PE + +S +++
Sbjct: 125 DPDNK-YAMPYMWATTGIGYNVDKVKAVLGDDAPVNSWDLVLKPENLEKLKSCGVSFLDA 183
Query: 281 PREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAV 325
P E+ A +L L L +R F S+ Y+ GD VA+
Sbjct: 184 PEEIFATVLNYLGKDPNSSKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDTCVAI 243
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
GW+ DV A R N++ +PK GA + D++A+PA ++
Sbjct: 244 GWAGDVWQAANRAKEAKNGVNISFSIPKEGAMAFFDVFAMPADAK 288
>gi|194443308|ref|YP_002040117.1| putrescine ABC transporter substrate-binding protein [Salmonella
enterica subsp. enterica serovar Newport str. SL254]
gi|194401971|gb|ACF62193.1| putrescine-binding periplasmic protein [Salmonella enterica subsp.
enterica serovar Newport str. SL254]
Length = 371
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 72/165 (43%), Gaps = 29/165 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP K +A PY W T IGY K + + AP+ W PE + +S +++
Sbjct: 125 DPDNK-YAMPYMWATTGIGYNVDKVKAVLGDDAPVNSWDLVLKPENLEKLKSCGVSFLDA 183
Query: 281 PREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAV 325
P E+ A +L L L +R F S+ Y+ GD VA+
Sbjct: 184 PEEIFATVLNYLDKDPNSSKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDTCVAI 243
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
GW+ DV A R N++ +PK GA + D++A+PA ++
Sbjct: 244 GWAGDVWQAANRAKEAKNGVNISFSIPKEGAMAFFDVFAMPADAK 288
>gi|432946095|ref|ZP_20141788.1| putrescine-binding periplasmic protein [Escherichia coli KTE196]
gi|433042361|ref|ZP_20229883.1| putrescine-binding periplasmic protein [Escherichia coli KTE117]
gi|431462087|gb|ELH42305.1| putrescine-binding periplasmic protein [Escherichia coli KTE196]
gi|431559359|gb|ELI32919.1| putrescine-binding periplasmic protein [Escherichia coli KTE117]
Length = 370
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 72/165 (43%), Gaps = 29/165 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP K +A PY W T IGY K + AP++ W PE + +S +++
Sbjct: 124 DPDNK-FAMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDA 182
Query: 281 PREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAV 325
P EV A L L L +R F S+ Y+ GD+ VA+
Sbjct: 183 PEEVFATVLNYLGKDPNSTKADDYTGPATELLLKLRPNIRYFHSSQYINDLANGDICVAI 242
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 243 GWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|398854682|ref|ZP_10611228.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM80]
gi|398235060|gb|EJN20915.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM80]
Length = 365
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 87/328 (26%), Positives = 142/328 (43%), Gaps = 54/328 (16%)
Query: 138 LRVVSLQNSVPQSWVKDFMRSQGKRLKF---------QMNLCASIDGIVNNLSTPFNK-L 187
LRV + + + VK F G R+ + + L A G +L P N L
Sbjct: 28 LRVYNWSDYIAPDTVKKFEDETGIRVTYDVFDSNETLEARLLAGKSGY--DLVVPSNSFL 85
Query: 188 SFAIKKRFIEPIAEAEDQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIGY 247
+ IK + + +++ +W K L+ V L++ A + D A PY WG++ IG+
Sbjct: 86 AKQIKAGVYQTLDKSKLPNW-KNLN---PVLLKNAAASDPD---NAHAFPYMWGSIGIGF 138
Query: 248 KKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNSPREVIVAG-----------G 289
+K + AP W + PE A + IS ++SP E+I A
Sbjct: 139 NPAKVKEVLGANAPTNSWDLLFKPENAEKLKACGISFLDSPTEMIPAALHYLGYPVNDKD 198
Query: 290 KIAVQQNLALLAN---QVRLFDSTHYLKAFGIGDVWVAVGWSSDVLP----AVKRMSNVA 342
+++ AL V F S+ Y+ G++ VAVG+S DVL AV+ +NV
Sbjct: 199 TAHIKEAEALFMKIRPNVAYFHSSKYISDLANGNICVAVGYSGDVLQAKARAVESGNNVV 258
Query: 343 V--VVPKSGASLWADLWAIP-AASRLETKQIGGQVRGPSPLIHQWIE---FCLQTARALP 396
+ +PK GA + D+ AIP A+ ++ + +I + + A A P
Sbjct: 259 IDYSIPKEGAGSFYDMVAIPRDAANVDNAYLFMDFLMRPDIIAEITNSNGYSNANAAATP 318
Query: 397 FKQEVI---PGASPS-ALESTLVKLPEE 420
E I PG+ PS A+ +TL +P++
Sbjct: 319 LVDEAIRNDPGSYPSQAVMATLYAVPDQ 346
>gi|298290940|ref|YP_003692879.1| family 1 extracellular solute-binding protein [Starkeya novella DSM
506]
gi|296927451|gb|ADH88260.1| extracellular solute-binding protein family 1 [Starkeya novella DSM
506]
Length = 369
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 72/164 (43%), Gaps = 32/164 (19%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQNH-NLAPIEDWKDPWWPELAGR-----ISMVNSP 281
DP G +A Y WGT IG K + P+ W + PE+ G+ + M++ P
Sbjct: 120 DP-GNEYAVNYMWGTTGIGLNIDKVKERLGDIPLNSWDIVFKPEILGKLKNCGVYMLDGP 178
Query: 282 REVIVAG----GKIAVQQN----------LALLANQVRLFDSTHYLKAFGIGDVWVAVGW 327
E+I GK ++ L + ++ FDS+ Y+ A GD+ +A GW
Sbjct: 179 EEIIPTALRYLGKDPNSKDPKDIEEAGKLLMPVRKFIKKFDSSGYINALAGGDICLATGW 238
Query: 328 SSDVLPAVKRMS-----------NVAVVVPKSGASLWADLWAIP 360
S DV A R N+ ++PK GA +W D +AIP
Sbjct: 239 SGDVFQAKARAEEAAEKTGKPPINIEYIIPKEGALMWFDNFAIP 282
>gi|418808399|ref|ZP_13363954.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21550]
gi|418812556|ref|ZP_13368079.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 22513]
gi|418815809|ref|ZP_13371304.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21538]
gi|418820021|ref|ZP_13375456.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 22425]
gi|418833304|ref|ZP_13388234.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM N18486]
gi|418835228|ref|ZP_13390124.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM N1543]
gi|418842143|ref|ZP_13396956.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21554]
gi|418843135|ref|ZP_13397934.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19443]
gi|418850066|ref|ZP_13404785.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 37978]
gi|418857148|ref|ZP_13411778.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19470]
gi|418861856|ref|ZP_13416406.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19536]
gi|418869018|ref|ZP_13423459.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 4176]
gi|392775976|gb|EJA32666.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 22513]
gi|392776587|gb|EJA33274.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21550]
gi|392791176|gb|EJA47666.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21538]
gi|392793037|gb|EJA49482.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 22425]
gi|392795876|gb|EJA52227.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM N18486]
gi|392804046|gb|EJA60223.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM N1543]
gi|392807468|gb|EJA63539.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21554]
gi|392817273|gb|EJA73188.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19443]
gi|392819272|gb|EJA75144.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 37978]
gi|392835358|gb|EJA90955.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19470]
gi|392837095|gb|EJA92666.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19536]
gi|392837708|gb|EJA93278.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 4176]
Length = 370
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 72/165 (43%), Gaps = 29/165 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP K +A PY W T IGY K + + AP+ W PE + +S +++
Sbjct: 124 DPDNK-YAMPYMWATTGIGYNVDKVKAVLGDDAPVNSWDLVLKPENLEKLKSCGVSFLDA 182
Query: 281 PREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAV 325
P E+ A +L L L +R F S+ Y+ GD VA+
Sbjct: 183 PEEIFATVLNYLDKDPNSSKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDTCVAI 242
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
GW+ DV A R N++ +PK GA + D++A+PA ++
Sbjct: 243 GWAGDVWQAANRAKEAKNGVNISFSIPKEGAMAFFDVFAMPADAK 287
>gi|224582727|ref|YP_002636525.1| putrescine ABC transporter periplasmic-binding protein [Salmonella
enterica subsp. enterica serovar Paratyphi C strain
RKS4594]
gi|375118328|ref|ZP_09763495.1| putrescine-binding periplasmic protein precursor [Salmonella
enterica subsp. enterica serovar Dublin str. SD3246]
gi|224467254|gb|ACN45084.1| putrescine-binding periplasmic protein precursor [Salmonella
enterica subsp. enterica serovar Paratyphi C strain
RKS4594]
gi|326622595|gb|EGE28940.1| putrescine-binding periplasmic protein precursor [Salmonella
enterica subsp. enterica serovar Dublin str. SD3246]
Length = 380
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 72/165 (43%), Gaps = 29/165 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP K +A PY W T IGY K + + AP+ W PE + +S +++
Sbjct: 134 DPDNK-YAMPYMWATTGIGYNVDKVKAVLGDDAPVNSWDLVLKPENLEKLKSCGVSFLDA 192
Query: 281 PREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAV 325
P E+ A +L L L +R F S+ Y+ GD VA+
Sbjct: 193 PEEIFATVLNYLGKDPNSSKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDTCVAI 252
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
GW+ DV A R N++ +PK GA + D++A+PA ++
Sbjct: 253 GWAGDVWQAANRAKEAKNGVNISFSIPKEGAMAFFDVFAMPADAK 297
>gi|56414033|ref|YP_151108.1| putrescine ABC transporter periplasmic protein [Salmonella enterica
subsp. enterica serovar Paratyphi A str. ATCC 9150]
gi|56128290|gb|AAV77796.1| putrescine-binding periplasmic protein precursor [Salmonella
enterica subsp. enterica serovar Paratyphi A str. ATCC
9150]
Length = 370
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 72/165 (43%), Gaps = 29/165 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP K +A PY W T IGY K + + AP+ W PE + +S +++
Sbjct: 124 DPDNK-YAMPYMWATTGIGYNVDKVKAVLGDDAPVNSWDLVLKPENLEKLKSCGVSFLDA 182
Query: 281 PREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAV 325
P E+ A +L L L +R F S+ Y+ GD VA+
Sbjct: 183 PEEIFATVLNYLGKDPNSSKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDTCVAI 242
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
GW+ DV A R N++ +PK GA + D++A+PA ++
Sbjct: 243 GWAGDVWQAANRAKEAKNGVNISFSIPKEGAMAFFDVFAMPADAK 287
>gi|161614859|ref|YP_001588824.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Paratyphi B str. SPB7]
gi|194451476|ref|YP_002044907.1| putrescine ABC transporter substrate-binding protein [Salmonella
enterica subsp. enterica serovar Heidelberg str. SL476]
gi|194468593|ref|ZP_03074577.1| putrescine-binding periplasmic protein [Salmonella enterica subsp.
enterica serovar Kentucky str. CVM29188]
gi|194736529|ref|YP_002113970.1| putrescine ABC transporter substrate-binding protein [Salmonella
enterica subsp. enterica serovar Schwarzengrund str.
CVM19633]
gi|195874047|ref|ZP_02700356.2| putrescine-binding periplasmic protein [Salmonella enterica subsp.
enterica serovar Newport str. SL317]
gi|197264414|ref|ZP_03164488.1| putrescine-binding periplasmic protein [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA23]
gi|197300890|ref|ZP_02661879.2| putrescine-binding periplasmic protein [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. SL480]
gi|198245718|ref|YP_002214842.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|200389573|ref|ZP_03216184.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Salmonella enterica subsp. enterica serovar Virchow
str. SL491]
gi|204930077|ref|ZP_03221098.1| putrescine-binding periplasmic protein [Salmonella enterica subsp.
enterica serovar Javiana str. GA_MM04042433]
gi|205357766|ref|ZP_02573227.2| putrescine-binding periplasmic protein [Salmonella enterica subsp.
enterica serovar 4,[5],12:i:- str. CVM23701]
gi|205358380|ref|ZP_02655841.2| putrescine-binding periplasmic protein [Salmonella enterica subsp.
enterica serovar Kentucky str. CDC 191]
gi|205358904|ref|ZP_02665689.2| putrescine-binding periplasmic protein [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL486]
gi|205359760|ref|ZP_02831960.2| putrescine-binding periplasmic protein [Salmonella enterica subsp.
enterica serovar Weltevreden str. HI_N05-537]
gi|205360691|ref|ZP_02685577.2| putrescine-binding periplasmic protein [Salmonella enterica subsp.
enterica serovar Hadar str. RI_05P066]
gi|374981583|ref|ZP_09722907.1| Putrescine ABC transporter putrescine-binding protein PotF
[Salmonella enterica subsp. enterica serovar Typhimurium
str. TN061786]
gi|375000630|ref|ZP_09724970.1| bacterial extracellular solute-binding protein [Salmonella enterica
subsp. enterica serovar Infantis str. SARB27]
gi|375122921|ref|ZP_09768085.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Gallinarum str. SG9]
gi|379700083|ref|YP_005241811.1| putrescine ABC transporter periplasmic-binding protein [Salmonella
enterica subsp. enterica serovar Typhimurium str.
ST4/74]
gi|383495658|ref|YP_005396347.1| putrescine-binding periplasmic protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. 798]
gi|386590782|ref|YP_006087182.1| Putrescine ABC transporter putrescine-binding protein PotF
[Salmonella enterica subsp. enterica serovar Heidelberg
str. B182]
gi|417473704|ref|ZP_12169030.1| Putrescine ABC transporter putrescine-binding protein PotF
[Salmonella enterica subsp. enterica serovar Rubislaw
str. A4-653]
gi|161364223|gb|ABX67991.1| hypothetical protein SPAB_02612 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|194409780|gb|ACF69999.1| putrescine-binding periplasmic protein [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL476]
gi|194454957|gb|EDX43796.1| putrescine-binding periplasmic protein [Salmonella enterica subsp.
enterica serovar Kentucky str. CVM29188]
gi|194712031|gb|ACF91252.1| putrescine-binding periplasmic protein [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. CVM19633]
gi|195630932|gb|EDX49518.1| putrescine-binding periplasmic protein [Salmonella enterica subsp.
enterica serovar Newport str. SL317]
gi|197242669|gb|EDY25289.1| putrescine-binding periplasmic protein [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA23]
gi|197290225|gb|EDY29582.1| putrescine-binding periplasmic protein [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. SL480]
gi|197940234|gb|ACH77567.1| putrescine-binding periplasmic protein [Salmonella enterica subsp.
enterica serovar Dublin str. CT_02021853]
gi|199602018|gb|EDZ00564.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Salmonella enterica subsp. enterica serovar Virchow
str. SL491]
gi|204321071|gb|EDZ06272.1| putrescine-binding periplasmic protein [Salmonella enterica subsp.
enterica serovar Javiana str. GA_MM04042433]
gi|205329670|gb|EDZ16434.1| putrescine-binding periplasmic protein [Salmonella enterica subsp.
enterica serovar 4,[5],12:i:- str. CVM23701]
gi|205334766|gb|EDZ21530.1| putrescine-binding periplasmic protein [Salmonella enterica subsp.
enterica serovar Kentucky str. CDC 191]
gi|205340175|gb|EDZ26939.1| putrescine-binding periplasmic protein [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL486]
gi|205343115|gb|EDZ29879.1| putrescine-binding periplasmic protein [Salmonella enterica subsp.
enterica serovar Weltevreden str. HI_N05-537]
gi|205347834|gb|EDZ34465.1| putrescine-binding periplasmic protein [Salmonella enterica subsp.
enterica serovar Hadar str. RI_05P066]
gi|321223239|gb|EFX48308.1| Putrescine ABC transporter putrescine-binding protein PotF
[Salmonella enterica subsp. enterica serovar Typhimurium
str. TN061786]
gi|323129182|gb|ADX16612.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Typhimurium str. ST4/74]
gi|326627171|gb|EGE33514.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Gallinarum str. SG9]
gi|353075318|gb|EHB41078.1| bacterial extracellular solute-binding protein [Salmonella enterica
subsp. enterica serovar Infantis str. SARB27]
gi|353650107|gb|EHC92566.1| Putrescine ABC transporter putrescine-binding protein PotF
[Salmonella enterica subsp. enterica serovar Rubislaw
str. A4-653]
gi|380462479|gb|AFD57882.1| putrescine-binding periplasmic protein precursor [Salmonella
enterica subsp. enterica serovar Typhimurium str. 798]
gi|383797826|gb|AFH44908.1| Putrescine ABC transporter putrescine-binding protein PotF
[Salmonella enterica subsp. enterica serovar Heidelberg
str. B182]
Length = 371
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 72/165 (43%), Gaps = 29/165 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP K +A PY W T IGY K + + AP+ W PE + +S +++
Sbjct: 125 DPDNK-YAMPYMWATTGIGYNVDKVKAVLGDDAPVNSWDLVLKPENLEKLKSCGVSFLDA 183
Query: 281 PREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAV 325
P E+ A +L L L +R F S+ Y+ GD VA+
Sbjct: 184 PEEIFATVLNYLGKDPNSSKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDTCVAI 243
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
GW+ DV A R N++ +PK GA + D++A+PA ++
Sbjct: 244 GWAGDVWQAANRAKEAKNGVNISFSIPKEGAMAFFDVFAMPADAK 288
>gi|420369175|ref|ZP_14869900.1| putrescine-binding periplasmic protein [Shigella flexneri 1235-66]
gi|391321501|gb|EIQ78224.1| putrescine-binding periplasmic protein [Shigella flexneri 1235-66]
Length = 370
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 73/168 (43%), Gaps = 29/168 (17%)
Query: 225 GEIDPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISM 277
G+ DP K +A PY W T IGY K + AP+ W PE + +S
Sbjct: 121 GKHDPDNK-FAMPYMWATTGIGYNVDKVKAVLGADAPVNSWDLILKPENLEKLKSCGVSF 179
Query: 278 VNSPREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVW 322
+++P EV A +L L L +R F S+ Y+ GD
Sbjct: 180 LDAPEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDTC 239
Query: 323 VAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
VA+GW+ DV A R N++ +PK GA + D++A+PA ++
Sbjct: 240 VAIGWAGDVWQAANRAKEAKNGVNISFSIPKEGAMAFFDVFAMPADAK 287
>gi|430002217|emb|CCF17998.1| Putrescine-binding periplasmic protein [Rhizobium sp.]
Length = 365
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 74/168 (44%), Gaps = 37/168 (22%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQNH-NLAPIEDWKDPWWPELAGR-----ISMVNSP 281
DP G +A Y WGT +GY K + P++ W + PE A + I+++++
Sbjct: 121 DP-GNEYAVNYMWGTTGLGYNVDKVKAALGDVPVDSWDILFKPENAEKLKACGINILDAS 179
Query: 282 REVIV-------------------AGGKIAVQQNLALLANQVRLFDSTHYLKAFGIGDVW 322
E AGG++ + + V+ F+S+ Y+ GD
Sbjct: 180 DETFAIAMNYVGKDPDSKETADLEAGGEVYMN-----IRPFVKTFNSSAYIDELANGDTC 234
Query: 323 VAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
+++GWS DVL A R NV V+PK G +W D AIPA ++
Sbjct: 235 ISMGWSGDVLQAKARAEEAGNGVNVEYVIPKEGTYMWFDNLAIPADAK 282
>gi|418510965|ref|ZP_13077235.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Pomona str. ATCC 10729]
gi|366085214|gb|EHN49104.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Pomona str. ATCC 10729]
Length = 370
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 72/165 (43%), Gaps = 29/165 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP K +A PY W T IGY K + + AP+ W PE + +S +++
Sbjct: 124 DPDNK-YAMPYMWATTGIGYNVDKVKAVLGDDAPVNSWDLVLKPENLEKLKSCGVSFLDA 182
Query: 281 PREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAV 325
P E+ A +L L L +R F S+ Y+ GD VA+
Sbjct: 183 PEEIFATVLNYLGKDPNSSKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDTCVAI 242
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
GW+ DV A R N++ +PK GA + D++A+PA ++
Sbjct: 243 GWAGDVWQAANRAKEAKNGVNISFSIPKEGAMAFFDVFAMPADAK 287
>gi|339489912|ref|YP_004704440.1| extracellular solute-binding protein [Pseudomonas putida S16]
gi|338840755|gb|AEJ15560.1| extracellular solute-binding protein [Pseudomonas putida S16]
Length = 381
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 73/163 (44%), Gaps = 27/163 (16%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQNH-NLAPIEDWKDPWWPELAGR-----ISMVNSP 281
DP G +A PY WGT IGY K + + I+ W + PE + ++ ++S
Sbjct: 137 DP-GNQYAVPYLWGTNGIGYNVDKVKAALGVDTIDSWAVLFEPENMKKLAKCGVAFLDSA 195
Query: 282 REVI--------------VAGGKIAVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGW 327
E++ A A ++ L + V F S+ Y+ GD+ VA G+
Sbjct: 196 DEMLPAVLNYMGLDPNSTNAKDYQAAEKKLLAVRPYVTYFHSSKYITDLANGDICVAAGF 255
Query: 328 SSDVLPA------VKRMSNVAVVVPKSGASLWADLWAIPAASR 364
S DV A K+ N+A +PK G +LW D+ AIP ++
Sbjct: 256 SGDVFQAKARAEEAKKGVNLAYAIPKEGGNLWFDVLAIPKDAK 298
>gi|417372044|ref|ZP_12142440.1| Putrescine ABC transporter putrescine-binding protein PotF, partial
[Salmonella enterica subsp. enterica serovar Inverness
str. R8-3668]
gi|417382044|ref|ZP_12148128.1| Putrescine ABC transporter putrescine-binding protein PotF, partial
[Salmonella enterica subsp. enterica serovar
Johannesburg str. S5-703]
gi|417509588|ref|ZP_12174719.1| Putrescine ABC transporter putrescine-binding protein PotF, partial
[Salmonella enterica subsp. enterica serovar Senftenberg
str. A4-543]
gi|353606362|gb|EHC60607.1| Putrescine ABC transporter putrescine-binding protein PotF, partial
[Salmonella enterica subsp. enterica serovar Inverness
str. R8-3668]
gi|353616115|gb|EHC67456.1| Putrescine ABC transporter putrescine-binding protein PotF, partial
[Salmonella enterica subsp. enterica serovar
Johannesburg str. S5-703]
gi|353648906|gb|EHC91680.1| Putrescine ABC transporter putrescine-binding protein PotF, partial
[Salmonella enterica subsp. enterica serovar Senftenberg
str. A4-543]
Length = 340
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 72/165 (43%), Gaps = 29/165 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP K +A PY W T IGY K + + AP+ W PE + +S +++
Sbjct: 125 DPDNK-YAMPYMWATTGIGYNVDKVKAVLGDDAPVNSWDLVLKPENLEKLKSCGVSFLDA 183
Query: 281 PREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAV 325
P E+ A +L L L +R F S+ Y+ GD VA+
Sbjct: 184 PEEIFATVLNYLGKDPNSSKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDTCVAI 243
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
GW+ DV A R N++ +PK GA + D++A+PA ++
Sbjct: 244 GWAGDVWQAANRAKEAKNGVNISFSIPKEGAMAFFDVFAMPADAK 288
>gi|262041052|ref|ZP_06014271.1| putrescine ABC superfamily ATP binding cassette transporter,
binding protein [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|259041610|gb|EEW42662.1| putrescine ABC superfamily ATP binding cassette transporter,
binding protein [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
Length = 370
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 72/165 (43%), Gaps = 29/165 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP K +A PY W T IGY K + AP++ W PE + +S +++
Sbjct: 124 DPENK-YAMPYLWATTGIGYNVDKVKAVLGKDAPVDSWDLVLKPENLEKLKSCGVSFLDA 182
Query: 281 PREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAV 325
P E+ A +L L L +R F S+ Y+ GD+ VA+
Sbjct: 183 PEEIFATVLNYLGKDPNSSKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 242
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
GW+ DV R NV+ +PK GA + D++A+PA ++
Sbjct: 243 GWAGDVWQVANRAKEAKNGVNVSYFIPKEGALAFFDVFAMPADAK 287
>gi|398989313|ref|ZP_10692655.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM24]
gi|399016316|ref|ZP_10718539.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM16]
gi|398105497|gb|EJL95590.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM16]
gi|398147975|gb|EJM36667.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM24]
Length = 365
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 87/328 (26%), Positives = 142/328 (43%), Gaps = 54/328 (16%)
Query: 138 LRVVSLQNSVPQSWVKDFMRSQGKRLKF---------QMNLCASIDGIVNNLSTPFNK-L 187
LRV + + + VK F G R+ + + L A G +L P N L
Sbjct: 28 LRVYNWSDYIAPDTVKKFEDETGIRVTYDVFDSNETLEARLLAGKSGY--DLVVPSNSFL 85
Query: 188 SFAIKKRFIEPIAEAEDQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIGY 247
+ IK + + +++ +W K L+ V L++ A + D A PY WG++ IG+
Sbjct: 86 AKQIKAGVYQTLDKSKLPNW-KNLN---PVLLKNAAASDPD---NAHAFPYMWGSIGIGF 138
Query: 248 KKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNSPREVIVAG-----------G 289
+K + AP W + PE A + IS ++SP E+I A
Sbjct: 139 NPAKVKEVLGANAPTNSWDLLFKPENAEKLKACGISFLDSPTEMIPAALHYLGYPVNDKD 198
Query: 290 KIAVQQNLALLAN---QVRLFDSTHYLKAFGIGDVWVAVGWSSDVLP----AVKRMSNVA 342
+++ AL V F S+ Y+ G++ VAVG+S DVL AV+ +NV
Sbjct: 199 TAHIKEAEALFMKIRPNVAYFHSSKYISDLANGNICVAVGYSGDVLQAKARAVESGNNVV 258
Query: 343 V--VVPKSGASLWADLWAIP-AASRLETKQIGGQVRGPSPLIHQWIE---FCLQTARALP 396
+ +PK GA + D+ AIP A+ ++ + +I + + A A P
Sbjct: 259 IDYSIPKEGAGSFYDMVAIPRDAANVDNAYLFMDFLMRPDIIAEITNSNGYSNANAAATP 318
Query: 397 FKQEVI---PGASPS-ALESTLVKLPEE 420
E I PG+ PS A+ +TL +P++
Sbjct: 319 LVDEAIRNDPGSYPSQAVMATLYAVPDQ 346
>gi|405379647|ref|ZP_11033495.1| spermidine/putrescine-binding periplasmic protein [Rhizobium sp.
CF142]
gi|397323895|gb|EJJ28285.1| spermidine/putrescine-binding periplasmic protein [Rhizobium sp.
CF142]
Length = 365
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 116/261 (44%), Gaps = 48/261 (18%)
Query: 139 RVVSLQN---SVPQSWVKDFMRSQGKRLKF---------QMNLCASIDGIVNNLSTPFNK 186
RVV++ N + S ++DF + G ++ + + L A G ++ P
Sbjct: 27 RVVNVYNWSDYIDSSILEDFTKETGIKVVYDTFDSNETLETKLLAG--GTGYDVVVP--T 82
Query: 187 LSFAIKKRFIEPIAEAEDQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIG 246
+SF ++++ + + D+ LS+ W + ++ DP G ++ Y WGT IG
Sbjct: 83 VSF-MQRQIAAGVYQKLDKSKLPNLSNMWDIVMKG--VATFDP-GNEYSVDYMWGTTGIG 138
Query: 247 YKKSKFQNHNLAPIE--DWKDPWWPELAGR-----ISMVNSPREVIVA---------GGK 290
Y K + L E +W + P A + I M++SP +VI + K
Sbjct: 139 YNVDKVKAA-LGTDEKPNWDALFDPAKAAKLKDCGIYMLDSPTDVIPSVLAYLGLDPNSK 197
Query: 291 IAVQQNLA---LLANQ--VRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------ 339
N A LLA + VR F S+ Y+ A GD+ +A+G+S DV A R +
Sbjct: 198 KPEDLNKAQEVLLAVRPFVRKFHSSEYISALANGDICIALGFSGDVFQARDRAAEAKAGV 257
Query: 340 NVAVVVPKSGASLWADLWAIP 360
NV VP GA ++ D++ IP
Sbjct: 258 NVDYSVPSQGAQIFFDVFGIP 278
>gi|445253380|ref|ZP_21409092.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily, partial [Salmonella enterica subsp.
enterica serovar Enteritidis str. 436]
gi|444889426|gb|ELY12869.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily, partial [Salmonella enterica subsp.
enterica serovar Enteritidis str. 436]
Length = 340
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 72/165 (43%), Gaps = 29/165 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP K +A PY W T IGY K + + AP+ W PE + +S +++
Sbjct: 124 DPDNK-YAMPYMWATTGIGYNVDKVKAVLGDDAPVNSWDLVLKPENLEKLKSCGVSFLDA 182
Query: 281 PREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAV 325
P E+ A +L L L +R F S+ Y+ GD VA+
Sbjct: 183 PEEIFATVLNYLGKDPNSSKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDTCVAI 242
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
GW+ DV A R N++ +PK GA + D++A+PA ++
Sbjct: 243 GWAGDVWQAANRAKEAKNGVNISFSIPKEGAMAFFDVFAMPADAK 287
>gi|431805015|ref|YP_007231918.1| extracellular solute-binding protein [Pseudomonas putida HB3267]
gi|430795780|gb|AGA75975.1| extracellular solute-binding protein [Pseudomonas putida HB3267]
Length = 364
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 73/163 (44%), Gaps = 27/163 (16%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQNH-NLAPIEDWKDPWWPELAGR-----ISMVNSP 281
DP G +A PY WGT IGY K + + I+ W + PE + ++ ++S
Sbjct: 120 DP-GNQYAVPYLWGTNGIGYNVDKVKAALGVDTIDSWAVLFEPENMKKLAKCGVAFLDSA 178
Query: 282 REVI--------------VAGGKIAVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGW 327
E++ A A ++ L + V F S+ Y+ GD+ VA G+
Sbjct: 179 DEMLPAVLNYMGLDPNSTNAKDYQAAEKKLLAVRPYVTYFHSSKYITDLANGDICVAAGF 238
Query: 328 SSDVLPA------VKRMSNVAVVVPKSGASLWADLWAIPAASR 364
S DV A K+ N+A +PK G +LW D+ AIP ++
Sbjct: 239 SGDVFQAKTRAEEAKKGVNLAYAIPKEGGNLWFDVLAIPKDAK 281
>gi|429108125|ref|ZP_19169994.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Cronobacter malonaticus 681]
gi|426294848|emb|CCJ96107.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Cronobacter malonaticus 681]
Length = 370
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 78/185 (42%), Gaps = 31/185 (16%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP K +A PY W T IGY K + AP+ W PE + +S +++
Sbjct: 124 DPDNK-YAMPYLWATTGIGYNVDKVKAALGTDAPLNSWDLVLKPENLEKLKSCGVSFLDA 182
Query: 281 PREVIVAG----GKI-----------AVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAV 325
P E+ GK A L L +R F S+ Y+ GD+ VA+
Sbjct: 183 PEEIFATVLNYLGKDPNSSKPDDYSGAATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 242
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIP--AASRLETKQIGGQVRGP 377
GW+ DV A R N++ +PK GA + D++A+P A ++ E Q + P
Sbjct: 243 GWAGDVWQAANRAKEAKNGVNISYTIPKEGALAFFDVFAMPADAKNKDEAYQFLNYLMRP 302
Query: 378 SPLIH 382
+ H
Sbjct: 303 DVMAH 307
>gi|197247643|ref|YP_002145831.1| putrescine ABC transporter substrate-binding protein [Salmonella
enterica subsp. enterica serovar Agona str. SL483]
gi|197211346|gb|ACH48743.1| putrescine-binding periplasmic protein [Salmonella enterica subsp.
enterica serovar Agona str. SL483]
Length = 371
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 72/165 (43%), Gaps = 29/165 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP K +A PY W T IGY K + + AP+ W PE + +S +++
Sbjct: 125 DPDNK-YAMPYMWATTGIGYNVDKVKAVLGDDAPVNSWDLVLKPENLEKLKSCGVSFLDA 183
Query: 281 PREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAV 325
P E+ A +L L L +R F S+ Y+ GD VA+
Sbjct: 184 PEEIFATVLNYLGKDPNSSKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDTCVAI 243
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
GW+ DV A R N++ +PK GA + D++A+PA ++
Sbjct: 244 GWAGDVWQAANRAKEAKNGVNISFSIPKEGAMAFFDVFAMPADAK 288
>gi|402490262|ref|ZP_10837051.1| putrescine-binding periplasmic component of ABC transporter
[Rhizobium sp. CCGE 510]
gi|401810288|gb|EJT02661.1| putrescine-binding periplasmic component of ABC transporter
[Rhizobium sp. CCGE 510]
Length = 365
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 85/187 (45%), Gaps = 35/187 (18%)
Query: 204 DQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIGY---KKSKFQNHNLAP- 259
D+ LS+ W V + GE DP G A Y WGT IGY K ++ ++ P
Sbjct: 99 DKSKLPNLSNMWDVIQQR--TGEYDP-GNEHAVDYMWGTDGIGYNVKKVAEILGPDVKPG 155
Query: 260 IEDWKDPWWPELAGR-----ISMVNSPREVIVAGGKI--------------AVQQNLALL 300
+E DP ++A + I ++++P++VI + ++ L +
Sbjct: 156 LEVIFDP---KVAAKFKDCGIYVLDTPKDVITTAFRYLGLEPNSTKAEDFKKAEELLTAV 212
Query: 301 ANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWA 354
+R F S+ Y+ A GD+ +A G+S D+L A R + V +P GA +W
Sbjct: 213 RPNIRKFHSSEYINALANGDICIAFGYSGDMLQARDRAAEAKNGVEVNYSIPPQGAQMWF 272
Query: 355 DLWAIPA 361
D+ AIPA
Sbjct: 273 DMMAIPA 279
>gi|418935702|ref|ZP_13489464.1| extracellular solute-binding protein family 1 [Rhizobium sp.
PDO1-076]
gi|375057645|gb|EHS53807.1| extracellular solute-binding protein family 1 [Rhizobium sp.
PDO1-076]
Length = 366
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 73/169 (43%), Gaps = 38/169 (22%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQNHNLA--PIEDWKDPWWPELAGR-----ISMVNS 280
DP G +A Y WGT IGY +K + A ++ W + PE A + I+++++
Sbjct: 121 DP-GNEYAVNYMWGTTGIGYNAAKIKEALGADFKVDSWDAIFKPENAEKLKACGINILDA 179
Query: 281 PREVIV-------------------AGGKIAVQQNLALLANQVRLFDSTHYLKAFGIGDV 321
E AGG + Q + V+ F+S+ Y+ GD+
Sbjct: 180 SDETFAISMNYIGKDPDSKAAADLEAGGAVYSQ-----IRPFVKTFNSSSYIDDLANGDI 234
Query: 322 WVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
V +GWS D+L A R + V+PK G +W D AIPA S+
Sbjct: 235 CVTIGWSGDILQAKARAEEAKNGVEIEYVIPKEGTYMWFDNLAIPADSK 283
>gi|16764239|ref|NP_459854.1| putrescine ABC transporter periplasmic-binding protein [Salmonella
enterica subsp. enterica serovar Typhimurium str. LT2]
gi|62179440|ref|YP_215857.1| putrescine ABC transporter periplasmic-binding protein [Salmonella
enterica subsp. enterica serovar Choleraesuis str.
SC-B67]
gi|197362956|ref|YP_002142593.1| putrescine ABC transporter substrate-binding protein [Salmonella
enterica subsp. enterica serovar Paratyphi A str.
AKU_12601]
gi|205352128|ref|YP_002225929.1| putrescine ABC transporter periplasmic-binding protein [Salmonella
enterica subsp. enterica serovar Gallinarum str. 287/91]
gi|207856310|ref|YP_002242961.1| putrescine transporter periplasmic binding protein [Salmonella
enterica subsp. enterica serovar Enteritidis str.
P125109]
gi|238913395|ref|ZP_04657232.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Tennessee str. CDC07-0191]
gi|375113763|ref|ZP_09758933.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SCSA50]
gi|378444354|ref|YP_005231986.1| putrescine-binding periplasmic protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. D23580]
gi|378449260|ref|YP_005236619.1| putrescine ABC transporter periplasmic substrate-binding protein
[Salmonella enterica subsp. enterica serovar Typhimurium
str. 14028S]
gi|378698812|ref|YP_005180769.1| putrescine-binding periplasmic protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. SL1344]
gi|378983477|ref|YP_005246632.1| putrescine ABC transporter dubstrate binding protein [Salmonella
enterica subsp. enterica serovar Typhimurium str.
T000240]
gi|378988262|ref|YP_005251426.1| putrescine ABC transporter periplasmic-binding protein [Salmonella
enterica subsp. enterica serovar Typhimurium str. UK-1]
gi|416421925|ref|ZP_11689829.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 315996572]
gi|416431442|ref|ZP_11695596.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-1]
gi|416441578|ref|ZP_11701790.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-3]
gi|416445354|ref|ZP_11704243.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-4]
gi|416454072|ref|ZP_11710075.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-1]
gi|416459284|ref|ZP_11713793.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-2]
gi|416467335|ref|ZP_11717352.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 531954]
gi|416480988|ref|ZP_11723044.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. NC_MB110209-0054]
gi|416489786|ref|ZP_11726398.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. OH_2009072675]
gi|416500390|ref|ZP_11731461.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. CASC_09SCPH15965]
gi|416505245|ref|ZP_11733679.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. SARB31]
gi|416523164|ref|ZP_11740911.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. ATCC BAA710]
gi|416530431|ref|ZP_11744957.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. LQC 10]
gi|416536481|ref|ZP_11748443.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. SARB30]
gi|416546337|ref|ZP_11753823.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 19N]
gi|416550445|ref|ZP_11755980.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 29N]
gi|416560306|ref|ZP_11761135.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 42N]
gi|416570264|ref|ZP_11765925.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 4441 H]
gi|416578438|ref|ZP_11770558.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 81038-01]
gi|416582376|ref|ZP_11772650.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. MD_MDA09249507]
gi|416593687|ref|ZP_11780093.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 414877]
gi|416599414|ref|ZP_11783648.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 366867]
gi|416604916|ref|ZP_11786537.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 413180]
gi|416612564|ref|ZP_11791589.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 446600]
gi|416617975|ref|ZP_11794380.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 609458-1]
gi|416634346|ref|ZP_11802511.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 556150-1]
gi|416640904|ref|ZP_11805226.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 609460]
gi|416650149|ref|ZP_11810257.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 507440-20]
gi|416663465|ref|ZP_11816202.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 556152]
gi|416669819|ref|ZP_11819662.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. MB101509-0077]
gi|416676218|ref|ZP_11821740.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. MB102109-0047]
gi|416689904|ref|ZP_11825666.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. MB110209-0055]
gi|416707497|ref|ZP_11832595.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. MB111609-0052]
gi|416714795|ref|ZP_11838113.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009083312]
gi|416716573|ref|ZP_11838920.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009085258]
gi|416730298|ref|ZP_11848549.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2009159199]
gi|416740458|ref|ZP_11854414.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008282]
gi|416746455|ref|ZP_11857777.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008283]
gi|416752325|ref|ZP_11860301.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008284]
gi|416760881|ref|ZP_11865089.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008285]
gi|416767412|ref|ZP_11869885.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008287]
gi|418483765|ref|ZP_13052771.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 80959-06]
gi|418491741|ref|ZP_13058249.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035278]
gi|418493962|ref|ZP_13060422.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035318]
gi|418500081|ref|ZP_13066480.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035320]
gi|418501903|ref|ZP_13068279.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035321]
gi|418509720|ref|ZP_13076012.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035327]
gi|418526741|ref|ZP_13092710.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008286]
gi|418763546|ref|ZP_13319661.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35185]
gi|418765268|ref|ZP_13321358.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35199]
gi|418769432|ref|ZP_13325462.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21539]
gi|418773483|ref|ZP_13329467.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 33953]
gi|418779533|ref|ZP_13335433.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35188]
gi|418784861|ref|ZP_13340697.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21559]
gi|418790736|ref|ZP_13346506.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19447]
gi|418791919|ref|ZP_13347670.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19449]
gi|418798868|ref|ZP_13354541.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19567]
gi|418803599|ref|ZP_13359217.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35202]
gi|419728021|ref|ZP_14254989.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41579]
gi|419736814|ref|ZP_14263640.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41563]
gi|419739303|ref|ZP_14266052.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41573]
gi|419742482|ref|ZP_14269155.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41566]
gi|419790942|ref|ZP_14316608.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. Levine 1]
gi|419794479|ref|ZP_14320091.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. Levine 15]
gi|421358050|ref|ZP_15808357.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 622731-39]
gi|421364722|ref|ZP_15814953.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 639016-6]
gi|421367512|ref|ZP_15817705.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 640631]
gi|421370304|ref|ZP_15820470.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 77-0424]
gi|421377749|ref|ZP_15827839.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607307-6]
gi|421382421|ref|ZP_15832468.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 485549-17]
gi|421386157|ref|ZP_15836172.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 596866-22]
gi|421392078|ref|ZP_15842039.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 596866-70]
gi|421393082|ref|ZP_15843029.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 629164-26]
gi|421398990|ref|ZP_15848894.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 629164-37]
gi|421404899|ref|ZP_15854735.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 639672-46]
gi|421408034|ref|ZP_15857840.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 639672-50]
gi|421411154|ref|ZP_15860922.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 77-1427]
gi|421419135|ref|ZP_15868831.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 77-2659]
gi|421421415|ref|ZP_15871083.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 78-1757]
gi|421425409|ref|ZP_15875045.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 22510-1]
gi|421432308|ref|ZP_15881884.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 8b-1]
gi|421434533|ref|ZP_15884082.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648905 5-18]
gi|421438876|ref|ZP_15888370.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 6-18]
gi|421446432|ref|ZP_15895844.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 50-3079]
gi|421450803|ref|ZP_15900173.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 58-6482]
gi|421569155|ref|ZP_16014859.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Heidelberg str. CFSAN00322]
gi|421573492|ref|ZP_16019128.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Heidelberg str. CFSAN00325]
gi|421580051|ref|ZP_16025612.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Heidelberg str. CFSAN00326]
gi|421584809|ref|ZP_16030316.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Heidelberg str. CFSAN00328]
gi|421887310|ref|ZP_16318470.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Senftenberg str. SS209]
gi|422025028|ref|ZP_16371490.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm1]
gi|422030051|ref|ZP_16376285.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm2]
gi|427547363|ref|ZP_18926799.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm8]
gi|427563384|ref|ZP_18931565.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm9]
gi|427582316|ref|ZP_18936321.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm3]
gi|427604668|ref|ZP_18941164.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm4]
gi|427629463|ref|ZP_18946067.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm6]
gi|427652696|ref|ZP_18950833.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm10]
gi|427660264|ref|ZP_18955780.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm11]
gi|427665392|ref|ZP_18960538.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm12]
gi|427744530|ref|ZP_18965557.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm5]
gi|436637409|ref|ZP_20516058.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 22704]
gi|436794612|ref|ZP_20522167.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CHS44]
gi|436811702|ref|ZP_20530582.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1882]
gi|436816074|ref|ZP_20533625.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1884]
gi|436839222|ref|ZP_20537542.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1594]
gi|436851669|ref|ZP_20542268.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1566]
gi|436858431|ref|ZP_20546951.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1580]
gi|436865607|ref|ZP_20551574.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1543]
gi|436875219|ref|ZP_20557126.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1441]
gi|436879091|ref|ZP_20559482.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1810]
gi|436884912|ref|ZP_20562310.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1558]
gi|436896727|ref|ZP_20569483.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1018]
gi|436906706|ref|ZP_20575552.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1010]
gi|436911343|ref|ZP_20577172.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1729]
gi|436918580|ref|ZP_20581726.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0895]
gi|436930796|ref|ZP_20589021.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0899]
gi|436933035|ref|ZP_20589474.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1457]
gi|436942485|ref|ZP_20595431.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1747]
gi|436947926|ref|ZP_20598332.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0968]
gi|436963547|ref|ZP_20605824.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1444]
gi|436969843|ref|ZP_20608758.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1445]
gi|436977547|ref|ZP_20612325.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1559]
gi|436995527|ref|ZP_20619252.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1565]
gi|437005278|ref|ZP_20622370.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1808]
gi|437022867|ref|ZP_20628732.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1811]
gi|437032170|ref|ZP_20631814.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0956]
gi|437041909|ref|ZP_20635814.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1455]
gi|437050133|ref|ZP_20640414.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1575]
gi|437055320|ref|ZP_20643463.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1725]
gi|437068624|ref|ZP_20650755.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1745]
gi|437077584|ref|ZP_20655483.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1791]
gi|437086927|ref|ZP_20660936.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1795]
gi|437088565|ref|ZP_20661602.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 576709]
gi|437112201|ref|ZP_20668584.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 635290-58]
gi|437124140|ref|ZP_20673211.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607308-16]
gi|437134227|ref|ZP_20678651.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607308-19]
gi|437138097|ref|ZP_20680827.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607307-2]
gi|437147716|ref|ZP_20686998.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607308-9]
gi|437156152|ref|ZP_20692077.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 629163]
gi|437161611|ref|ZP_20695547.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. SE15-1]
gi|437166342|ref|ZP_20697995.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_N202]
gi|437177620|ref|ZP_20704100.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_56-3991]
gi|437185424|ref|ZP_20708998.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_76-3618]
gi|437194019|ref|ZP_20710930.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 13183-1]
gi|437260873|ref|ZP_20717943.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_81-2490]
gi|437267092|ref|ZP_20721058.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. SL909]
gi|437276451|ref|ZP_20726460.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. SL913]
gi|437300328|ref|ZP_20733092.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_69-4941]
gi|437311231|ref|ZP_20735826.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 638970-15]
gi|437325736|ref|ZP_20740008.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 17927]
gi|437336472|ref|ZP_20743079.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CHS4]
gi|437356934|ref|ZP_20748005.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 22558]
gi|437420137|ref|ZP_20754514.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 543463 22-17]
gi|437448468|ref|ZP_20759210.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 543463 40-18]
gi|437467937|ref|ZP_20764579.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 561362 1-1]
gi|437489622|ref|ZP_20770407.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 642046 4-7]
gi|437512799|ref|ZP_20777354.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648898 4-5]
gi|437537514|ref|ZP_20781772.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648899 3-17]
gi|437556094|ref|ZP_20784931.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648900 1-16]
gi|437575498|ref|ZP_20790294.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 1-17]
gi|437595047|ref|ZP_20795806.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 39-2]
gi|437607023|ref|ZP_20800041.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648902 6-8]
gi|437622005|ref|ZP_20804515.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648903 1-6]
gi|437647434|ref|ZP_20809247.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648904 3-6]
gi|437659091|ref|ZP_20812018.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 653049 13-19]
gi|437678584|ref|ZP_20817786.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 642044 8-1]
gi|437688682|ref|ZP_20819912.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 561362 9-7]
gi|437712900|ref|ZP_20827276.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 543463 42-20]
gi|437732320|ref|ZP_20831575.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 16-16]
gi|437772380|ref|ZP_20835729.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 76-2651]
gi|437803977|ref|ZP_20838692.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 33944]
gi|438089680|ref|ZP_20860263.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 81-2625]
gi|438104700|ref|ZP_20865964.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 62-1976]
gi|438114131|ref|ZP_20869907.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 53-407]
gi|445139775|ref|ZP_21384533.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Dublin str. SL1438]
gi|445152484|ref|ZP_21390867.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Dublin str. HWS51]
gi|445177638|ref|ZP_21397760.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. SE8a]
gi|445228210|ref|ZP_21404615.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. SE10]
gi|445327766|ref|ZP_21412766.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 18569]
gi|445346380|ref|ZP_21418750.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 13-1]
gi|445367420|ref|ZP_21425547.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. PT23]
gi|452120916|ref|YP_007471164.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Javiana str. CFSAN001992]
gi|16419385|gb|AAL19813.1| ABC superfamily (peri_perm), putrescine transporter [Salmonella
enterica subsp. enterica serovar Typhimurium str. LT2]
gi|62127073|gb|AAX64776.1| ABC superfamily (peri_perm), putrescine transporter [Salmonella
enterica subsp. enterica serovar Choleraesuis str.
SC-B67]
gi|197094433|emb|CAR59949.1| putrescine-binding periplasmic protein precursor [Salmonella
enterica subsp. enterica serovar Paratyphi A str.
AKU_12601]
gi|205271909|emb|CAR36751.1| putrescine-binding periplasmic protein precursor [Salmonella
enterica subsp. enterica serovar Gallinarum str. 287/91]
gi|206708113|emb|CAR32406.1| putrescine-binding periplasmic protein precursor [Salmonella
enterica subsp. enterica serovar Enteritidis str.
P125109]
gi|261246133|emb|CBG23936.1| putrescine-binding periplasmic protein precursor [Salmonella
enterica subsp. enterica serovar Typhimurium str.
D23580]
gi|267992638|gb|ACY87523.1| putrescine ABC transporter periplasmic substrate-binding protein
[Salmonella enterica subsp. enterica serovar Typhimurium
str. 14028S]
gi|301157460|emb|CBW16950.1| putrescine-binding periplasmic protein precursor [Salmonella
enterica subsp. enterica serovar Typhimurium str.
SL1344]
gi|312911905|dbj|BAJ35879.1| putrescine ABC transporter dubstrate binding protein [Salmonella
enterica subsp. enterica serovar Typhimurium str.
T000240]
gi|322616352|gb|EFY13261.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 315996572]
gi|322619602|gb|EFY16477.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-1]
gi|322622702|gb|EFY19547.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-3]
gi|322628614|gb|EFY25401.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-4]
gi|322631551|gb|EFY28307.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-1]
gi|322637078|gb|EFY33781.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-2]
gi|322641723|gb|EFY38359.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 531954]
gi|322644484|gb|EFY41024.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. NC_MB110209-0054]
gi|322650055|gb|EFY46472.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. OH_2009072675]
gi|322654152|gb|EFY50475.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. CASC_09SCPH15965]
gi|322658067|gb|EFY54334.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 19N]
gi|322663541|gb|EFY59743.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 81038-01]
gi|322670277|gb|EFY66417.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. MD_MDA09249507]
gi|322671513|gb|EFY67635.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 414877]
gi|322676869|gb|EFY72936.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 366867]
gi|322682794|gb|EFY78813.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 413180]
gi|322686473|gb|EFY82455.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 446600]
gi|322713909|gb|EFZ05480.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SCSA50]
gi|323196073|gb|EFZ81236.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 609458-1]
gi|323196781|gb|EFZ81925.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 556150-1]
gi|323202940|gb|EFZ87974.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 609460]
gi|323209702|gb|EFZ94629.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 556152]
gi|323215183|gb|EFZ99928.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. MB101509-0077]
gi|323222386|gb|EGA06764.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. MB102109-0047]
gi|323227510|gb|EGA11670.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. MB110209-0055]
gi|323229861|gb|EGA13984.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. MB111609-0052]
gi|323233086|gb|EGA17182.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009083312]
gi|323240821|gb|EGA24863.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009085258]
gi|323248680|gb|EGA32608.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2009159199]
gi|323251681|gb|EGA35548.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008282]
gi|323257331|gb|EGA41029.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008283]
gi|323263906|gb|EGA47424.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008284]
gi|323267935|gb|EGA51414.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008285]
gi|323271998|gb|EGA55413.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008287]
gi|332987809|gb|AEF06792.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Typhimurium str. UK-1]
gi|363550811|gb|EHL35137.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. ATCC BAA710]
gi|363550883|gb|EHL35208.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. LQC 10]
gi|363556179|gb|EHL40394.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. SARB31]
gi|363564802|gb|EHL48843.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. SARB30]
gi|363568401|gb|EHL52381.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 29N]
gi|363574981|gb|EHL58840.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 42N]
gi|363575548|gb|EHL59398.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 4441 H]
gi|366060306|gb|EHN24570.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035278]
gi|366060740|gb|EHN25000.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 80959-06]
gi|366063209|gb|EHN27429.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035318]
gi|366069548|gb|EHN33671.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035320]
gi|366076350|gb|EHN40388.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035321]
gi|366077815|gb|EHN41824.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035327]
gi|366828332|gb|EHN55219.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 507440-20]
gi|372205349|gb|EHP18864.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008286]
gi|379983026|emb|CCF90743.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Senftenberg str. SS209]
gi|381290488|gb|EIC31753.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41563]
gi|381299395|gb|EIC40468.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41573]
gi|381301603|gb|EIC42659.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41579]
gi|381313777|gb|EIC54556.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41566]
gi|392612685|gb|EIW95154.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. Levine 1]
gi|392614781|gb|EIW97225.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. Levine 15]
gi|392733014|gb|EIZ90220.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35185]
gi|392739728|gb|EIZ96860.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21539]
gi|392741421|gb|EIZ98526.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35199]
gi|392752105|gb|EJA09047.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35188]
gi|392753565|gb|EJA10494.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21559]
gi|392753857|gb|EJA10778.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 33953]
gi|392757049|gb|EJA13940.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19447]
gi|392765510|gb|EJA22296.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19567]
gi|392769452|gb|EJA26185.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19449]
gi|392772694|gb|EJA29394.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35202]
gi|395982950|gb|EJH92144.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 639016-6]
gi|395986032|gb|EJH95196.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 640631]
gi|395989145|gb|EJH98280.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 622731-39]
gi|395998026|gb|EJI07064.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607307-6]
gi|395998328|gb|EJI07360.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 485549-17]
gi|396006856|gb|EJI15817.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 77-0424]
gi|396009758|gb|EJI18681.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 596866-70]
gi|396014776|gb|EJI23661.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 596866-22]
gi|396019333|gb|EJI28190.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 629164-26]
gi|396024746|gb|EJI33531.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 639672-46]
gi|396029164|gb|EJI37903.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 639672-50]
gi|396029434|gb|EJI38171.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 629164-37]
gi|396036643|gb|EJI45302.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 77-2659]
gi|396040730|gb|EJI49353.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 78-1757]
gi|396046688|gb|EJI55271.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 77-1427]
gi|396050699|gb|EJI59221.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 8b-1]
gi|396057879|gb|EJI66349.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 22510-1]
gi|396060284|gb|EJI68730.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648905 5-18]
gi|396062014|gb|EJI70427.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 50-3079]
gi|396065299|gb|EJI73676.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 58-6482]
gi|396072104|gb|EJI80419.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 6-18]
gi|402520530|gb|EJW27872.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Heidelberg str. CFSAN00326]
gi|402527509|gb|EJW34770.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Heidelberg str. CFSAN00322]
gi|402527751|gb|EJW35011.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Heidelberg str. CFSAN00325]
gi|402530781|gb|EJW37995.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Heidelberg str. CFSAN00328]
gi|414022365|gb|EKT05851.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm8]
gi|414022428|gb|EKT05913.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm1]
gi|414023991|gb|EKT07396.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm2]
gi|414036091|gb|EKT18934.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm9]
gi|414037519|gb|EKT20288.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm3]
gi|414040678|gb|EKT23286.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm4]
gi|414050707|gb|EKT32869.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm10]
gi|414051941|gb|EKT34019.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm6]
gi|414056183|gb|EKT38021.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm11]
gi|414061132|gb|EKT42575.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm12]
gi|414066661|gb|EKT47180.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm5]
gi|434957552|gb|ELL51185.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 22704]
gi|434962641|gb|ELL55817.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CHS44]
gi|434964333|gb|ELL57355.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1882]
gi|434974190|gb|ELL66578.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1884]
gi|434980530|gb|ELL72451.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1594]
gi|434986971|gb|ELL78622.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1566]
gi|434990583|gb|ELL82133.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1580]
gi|434994810|gb|ELL86127.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1441]
gi|434996642|gb|ELL87958.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1543]
gi|435007074|gb|ELL97931.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1810]
gi|435013094|gb|ELM03754.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1558]
gi|435015283|gb|ELM05840.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1010]
gi|435016616|gb|ELM07142.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1018]
gi|435025588|gb|ELM15719.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1729]
gi|435030578|gb|ELM20587.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0895]
gi|435032451|gb|ELM22395.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0899]
gi|435042684|gb|ELM32401.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1747]
gi|435044090|gb|ELM33788.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1457]
gi|435048796|gb|ELM38352.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1444]
gi|435056664|gb|ELM46035.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0968]
gi|435058613|gb|ELM47934.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1445]
gi|435062969|gb|ELM52141.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1565]
gi|435070760|gb|ELM59742.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1559]
gi|435071618|gb|ELM60558.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1808]
gi|435076125|gb|ELM64921.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1811]
gi|435080106|gb|ELM68799.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0956]
gi|435085173|gb|ELM73727.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1455]
gi|435095115|gb|ELM83452.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1745]
gi|435095274|gb|ELM83592.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1575]
gi|435098662|gb|ELM86893.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1725]
gi|435103073|gb|ELM91176.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1795]
gi|435103288|gb|ELM91383.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1791]
gi|435116600|gb|ELN04335.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 576709]
gi|435116879|gb|ELN04593.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 635290-58]
gi|435119706|gb|ELN07308.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607308-19]
gi|435120494|gb|ELN08072.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607308-16]
gi|435133819|gb|ELN20975.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607308-9]
gi|435134034|gb|ELN21178.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607307-2]
gi|435136931|gb|ELN24003.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 629163]
gi|435144668|gb|ELN31500.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. SE15-1]
gi|435153000|gb|ELN39621.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_N202]
gi|435155300|gb|ELN41858.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_56-3991]
gi|435159477|gb|ELN45798.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_76-3618]
gi|435163329|gb|ELN49465.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_81-2490]
gi|435173809|gb|ELN59278.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. SL913]
gi|435176244|gb|ELN61634.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. SL909]
gi|435178731|gb|ELN63928.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_69-4941]
gi|435183993|gb|ELN68939.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 638970-15]
gi|435192975|gb|ELN77478.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 17927]
gi|435197541|gb|ELN81824.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CHS4]
gi|435201339|gb|ELN85251.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 543463 22-17]
gi|435209066|gb|ELN92444.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 543463 40-18]
gi|435211472|gb|ELN94574.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 22558]
gi|435215386|gb|ELN98073.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 561362 1-1]
gi|435229420|gb|ELO10784.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 13183-1]
gi|435230491|gb|ELO11797.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648898 4-5]
gi|435231624|gb|ELO12853.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 642046 4-7]
gi|435239890|gb|ELO20323.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648899 3-17]
gi|435241635|gb|ELO21977.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648900 1-16]
gi|435245463|gb|ELO25550.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 1-17]
gi|435251318|gb|ELO30947.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 39-2]
gi|435254229|gb|ELO33632.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648902 6-8]
gi|435256225|gb|ELO35570.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648903 1-6]
gi|435270143|gb|ELO48647.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 653049 13-19]
gi|435270614|gb|ELO49109.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648904 3-6]
gi|435273279|gb|ELO51621.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 642044 8-1]
gi|435282427|gb|ELO60045.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 561362 9-7]
gi|435287183|gb|ELO64398.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 543463 42-20]
gi|435288224|gb|ELO65274.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 16-16]
gi|435303087|gb|ELO79005.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 33944]
gi|435305634|gb|ELO81084.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 76-2651]
gi|435316876|gb|ELO89959.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 81-2625]
gi|435321996|gb|ELO94337.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 62-1976]
gi|435329155|gb|ELP00608.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 53-407]
gi|444853073|gb|ELX78145.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Dublin str. SL1438]
gi|444854275|gb|ELX79340.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Dublin str. HWS51]
gi|444855893|gb|ELX80932.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. SE8a]
gi|444866305|gb|ELX91038.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. SE10]
gi|444878046|gb|ELY02174.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 13-1]
gi|444880544|gb|ELY04618.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 18569]
gi|444882367|gb|ELY06333.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. PT23]
gi|451909920|gb|AGF81726.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Javiana str. CFSAN001992]
Length = 370
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 72/165 (43%), Gaps = 29/165 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP K +A PY W T IGY K + + AP+ W PE + +S +++
Sbjct: 124 DPDNK-YAMPYMWATTGIGYNVDKVKAVLGDDAPVNSWDLVLKPENLEKLKSCGVSFLDA 182
Query: 281 PREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAV 325
P E+ A +L L L +R F S+ Y+ GD VA+
Sbjct: 183 PEEIFATVLNYLGKDPNSSKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDTCVAI 242
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
GW+ DV A R N++ +PK GA + D++A+PA ++
Sbjct: 243 GWAGDVWQAANRAKEAKNGVNISFSIPKEGAMAFFDVFAMPADAK 287
>gi|418021465|ref|ZP_12660549.1| Spermidine/putrescine-binding periplasmic protein [Candidatus
Regiella insecticola R5.15]
gi|347603175|gb|EGY28056.1| Spermidine/putrescine-binding periplasmic protein [Candidatus
Regiella insecticola R5.15]
Length = 379
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 74/165 (44%), Gaps = 29/165 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQNH--NLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP + +A PY W T IGY K + + AP W E + +S +++
Sbjct: 133 DPDNQ-FAIPYLWNTTGIGYNVEKIKQALGDDAPTNSWDLVLKAENLAKLKNCGVSFLDA 191
Query: 281 PREVIV---------AGGKIA------VQQNLALLANQVRLFDSTHYLKAFGIGDVWVAV 325
P E+ A ++A + L L +R F S+ Y+ GD+ VAV
Sbjct: 192 PSEIFATLLHYLGKDANSQLASDYTGSATELLLTLRPSIRYFHSSQYINDLANGDICVAV 251
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
GW+ D++ A R N+A +PK GA + D++A+PA ++
Sbjct: 252 GWNGDIVQAANRAKEAKNGVNIAYSIPKEGALVTFDVFAMPADAK 296
>gi|167036227|ref|YP_001671458.1| extracellular solute-binding protein [Pseudomonas putida GB-1]
gi|166862715|gb|ABZ01123.1| extracellular solute-binding protein family 1 [Pseudomonas putida
GB-1]
Length = 364
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 72/163 (44%), Gaps = 27/163 (16%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQNH-NLAPIEDWKDPWWPELAGR-----ISMVNSP 281
DP G +A PY WGT IGY K + + I+ W + PE + ++ ++S
Sbjct: 120 DP-GNQYAVPYLWGTNGIGYNVDKVKAALGVDTIDSWAVLFEPENMKKLAKCGVAFLDSA 178
Query: 282 REVIVA--------------GGKIAVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGW 327
E++ A +Q L + V F S+ Y+ GD+ VA G+
Sbjct: 179 DEMLPAVLNYMGLDPNSTDPKDYAKAEQKLLAVRPYVTYFHSSKYITDLANGDICVAAGF 238
Query: 328 SSDVLPA------VKRMSNVAVVVPKSGASLWADLWAIPAASR 364
S DV A K+ N+A +PK G +LW D+ AIP ++
Sbjct: 239 SGDVFQAKARAEEAKKGVNLAYAIPKEGGNLWFDVLAIPKDAK 281
>gi|440764387|ref|ZP_20943415.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Agona str. SH11G1113]
gi|440769465|ref|ZP_20948423.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Agona str. SH08SF124]
gi|440770940|ref|ZP_20949868.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Agona str. SH10GFN094]
gi|436414553|gb|ELP12481.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Agona str. SH08SF124]
gi|436416537|gb|ELP14442.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Agona str. SH11G1113]
gi|436423512|gb|ELP21323.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Agona str. SH10GFN094]
Length = 370
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 72/165 (43%), Gaps = 29/165 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP K +A PY W T IGY K + + AP+ W PE + +S +++
Sbjct: 124 DPDNK-YAMPYMWATTGIGYNVDKVKAVLGDDAPVNSWDLVLKPENLEKLKSCGVSFLDA 182
Query: 281 PREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAV 325
P E+ A +L L L +R F S+ Y+ GD VA+
Sbjct: 183 PEEIFATVLNYLGKDPNSSKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDTCVAI 242
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
GW+ DV A R N++ +PK GA + D++A+PA ++
Sbjct: 243 GWAGDVWQAANRAKEAKNGVNISFSIPKEGAMAFFDVFAMPADAK 287
>gi|259908954|ref|YP_002649310.1| putrescine ABC transporter periplasmic-binding protein [Erwinia
pyrifoliae Ep1/96]
gi|387871873|ref|YP_005803248.1| putrescine ABC transporter substrate-binding protein [Erwinia
pyrifoliae DSM 12163]
gi|224964576|emb|CAX56089.1| Putrescine-binding periplasmic protein [Erwinia pyrifoliae Ep1/96]
gi|283478961|emb|CAY74877.1| putrescine ABC transport system, periplasmic component [Erwinia
pyrifoliae DSM 12163]
Length = 369
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 88/217 (40%), Gaps = 36/217 (16%)
Query: 228 DPRGKIWAAPYRWGTMAIGY--KKSKFQNHNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP G +A PY W T IGY +K K AP+ W PE R +S +++
Sbjct: 123 DP-GNKYAIPYLWATTGIGYNVEKVKAALGKDAPVNSWDLVLKPENLARLKSCGVSFLDA 181
Query: 281 PREVIVA----GGKI-----------AVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAV 325
P E+ GK A L L +R F S+ Y+ G++ VA+
Sbjct: 182 PEEIFATVLNYQGKDPNSSDAKDYSGAATDLLLKLRPNIRYFHSSQYINDLANGNICVAI 241
Query: 326 GWSSDVLPAVKRM------SNVAVVVPKSGASLWADLWAIP--AASRLETKQIGGQVRGP 377
GW+ DVL A R ++A +PK GA + D AIP A + E Q + P
Sbjct: 242 GWAGDVLQAKNRALAAKNGVDIAYSIPKEGALAFFDTLAIPKDAKNVDEAYQFLNYLLKP 301
Query: 378 SPL--IHQWIEFCLQTARALPFKQEVI---PGASPSA 409
+ I + + ++PF I PG P A
Sbjct: 302 EVMAQISNAVFYASGNKASVPFVDAAIRNNPGVYPPA 338
>gi|15887954|ref|NP_353635.1| ABC transporter, substrate binding protein (putrescine)
[Agrobacterium fabrum str. C58]
gi|15155556|gb|AAK86420.1| ABC transporter, substrate binding protein (putrescine)
[Agrobacterium fabrum str. C58]
Length = 365
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 75/168 (44%), Gaps = 37/168 (22%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQNH-NLAPIEDWKDPWWPELAGR-----ISMVNSP 281
DP G +A Y WGT IGY +K + P++ W + PE A + I+++++
Sbjct: 121 DP-GNEYAVNYMWGTTGIGYNVAKVKAALGDVPVDSWDVLFKPENAEKLKSCGINILDAS 179
Query: 282 REVIV-------------------AGGKIAVQQNLALLANQVRLFDSTHYLKAFGIGDVW 322
E AGG++ + + V+ F+S+ Y+ GD
Sbjct: 180 DETFAIAMNYLGKNPDSKETADLEAGGEV-----YSKIRPYVKTFNSSPYINDLANGDTC 234
Query: 323 VAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
+++GWS D+L A R V V+PK G +W D +AIPA ++
Sbjct: 235 ISIGWSGDILQAKTRAEEAKNGVEVNYVIPKEGTYIWMDSFAIPADAK 282
>gi|421529430|ref|ZP_15975965.1| extracellular solute-binding protein [Pseudomonas putida S11]
gi|402213158|gb|EJT84520.1| extracellular solute-binding protein [Pseudomonas putida S11]
Length = 288
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 73/163 (44%), Gaps = 27/163 (16%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQNH-NLAPIEDWKDPWWPELAGR-----ISMVNSP 281
DP G +A PY WGT IGY K + + I+ W + PE + ++ ++S
Sbjct: 44 DP-GNQYAVPYLWGTNGIGYNVDKVKAALGVDTIDSWAVLFEPENMKKLAKCGVAFLDSA 102
Query: 282 REVI--------------VAGGKIAVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGW 327
E++ A A ++ L + V F S+ Y+ GD+ VA G+
Sbjct: 103 DEMLPAVLNYMGLDPNSTNAKDYQAAEKKLLAVRPYVTYFHSSKYITDLANGDICVAAGF 162
Query: 328 SSDVLPA------VKRMSNVAVVVPKSGASLWADLWAIPAASR 364
S DV A K+ N+A +PK G +LW D+ AIP ++
Sbjct: 163 SGDVFQAKTRAEEAKKGVNLAYAIPKEGGNLWFDVLAIPKDAK 205
>gi|339006887|ref|ZP_08639462.1| spermidine/putrescine-binding periplasmic protein [Brevibacillus
laterosporus LMG 15441]
gi|421873293|ref|ZP_16304907.1| bacterial extracellular solute-binding family protein
[Brevibacillus laterosporus GI-9]
gi|338776096|gb|EGP35624.1| spermidine/putrescine-binding periplasmic protein [Brevibacillus
laterosporus LMG 15441]
gi|372457619|emb|CCF14456.1| bacterial extracellular solute-binding family protein
[Brevibacillus laterosporus GI-9]
Length = 349
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 66/151 (43%), Gaps = 19/151 (12%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVI-- 285
DP K ++ Y WG I Y K + P W D W P+ GR+ ++N RE +
Sbjct: 122 DPDNK-YSVVYTWGVTGIAYNKK----YVTEPPTSWSDLWNPKYKGRVVVLNDSREALGM 176
Query: 286 ------VAGGKIAVQQ------NLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLP 333
+ I+ ++ +L L + FD+ + F + W+ WS D
Sbjct: 177 SLKKNGFSNSTISEKELDIANADLKKLLPNLLAFDTDTIKQKFIAEEAWIGTVWSGDAAF 236
Query: 334 AVKRMSNVAVVVPKSGASLWADLWAIPAASR 364
+++ VVPK G +++AD +AIP ++
Sbjct: 237 IYPENNDIGYVVPKEGGTIFADTFAIPKGAK 267
>gi|417413311|ref|ZP_12158325.1| Putrescine ABC transporter putrescine-binding protein PotF, partial
[Salmonella enterica subsp. enterica serovar Mississippi
str. A4-633]
gi|353625997|gb|EHC74643.1| Putrescine ABC transporter putrescine-binding protein PotF, partial
[Salmonella enterica subsp. enterica serovar Mississippi
str. A4-633]
Length = 348
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 72/165 (43%), Gaps = 29/165 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP K +A PY W T IGY K + + AP+ W PE + +S +++
Sbjct: 125 DPDNK-YAMPYMWATTGIGYNVDKVKAVLGDDAPVNSWDLVLKPENLEKLKSCGVSFLDA 183
Query: 281 PREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAV 325
P E+ A +L L L +R F S+ Y+ GD VA+
Sbjct: 184 PEEIFATVLNYLGKDPNSSKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDTCVAI 243
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
GW+ DV A R N++ +PK GA + D++A+PA ++
Sbjct: 244 GWAGDVWQAANRAKEAKNGVNISFSIPKEGAMAFFDVFAMPADAK 288
>gi|417356781|ref|ZP_12132254.1| Putrescine ABC transporter putrescine-binding protein PotF, partial
[Salmonella enterica subsp. enterica serovar Give str.
S5-487]
gi|353595222|gb|EHC52527.1| Putrescine ABC transporter putrescine-binding protein PotF, partial
[Salmonella enterica subsp. enterica serovar Give str.
S5-487]
Length = 332
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 72/165 (43%), Gaps = 29/165 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP K +A PY W T IGY K + + AP+ W PE + +S +++
Sbjct: 125 DPDNK-YAMPYMWATTGIGYNVDKVKAVLGDDAPVNSWDLVLKPENLEKLKSCGVSFLDA 183
Query: 281 PREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAV 325
P E+ A +L L L +R F S+ Y+ GD VA+
Sbjct: 184 PEEIFATVLNYLGKDPNSSKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDTCVAI 243
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
GW+ DV A R N++ +PK GA + D++A+PA ++
Sbjct: 244 GWAGDVWQAANRAKEAKNGVNISFSIPKEGAMAFFDVFAMPADAK 288
>gi|417332548|ref|ZP_12116395.1| Putrescine ABC transporter putrescine-binding protein PotF, partial
[Salmonella enterica subsp. enterica serovar Alachua
str. R6-377]
gi|353581346|gb|EHC42310.1| Putrescine ABC transporter putrescine-binding protein PotF, partial
[Salmonella enterica subsp. enterica serovar Alachua
str. R6-377]
Length = 328
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 72/165 (43%), Gaps = 29/165 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP K +A PY W T IGY K + + AP+ W PE + +S +++
Sbjct: 125 DPDNK-YAMPYMWATTGIGYNVDKVKAVLGDDAPVNSWDLVLKPENLEKLKSCGVSFLDA 183
Query: 281 PREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAV 325
P E+ A +L L L +R F S+ Y+ GD VA+
Sbjct: 184 PEEIFATVLNYLGKDPNSSKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDTCVAI 243
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
GW+ DV A R N++ +PK GA + D++A+PA ++
Sbjct: 244 GWAGDVWQAANRAKEAKNGVNISFSIPKEGAMAFFDVFAMPADAK 288
>gi|339482351|ref|YP_004694137.1| extracellular solute-binding protein family 1 [Nitrosomonas sp.
Is79A3]
gi|338804496|gb|AEJ00738.1| extracellular solute-binding protein family 1 [Nitrosomonas sp.
Is79A3]
Length = 371
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 87/185 (47%), Gaps = 34/185 (18%)
Query: 227 IDPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPE----LAGRISMVNSPR 282
DP K ++ PY + +G+ +K Q L P + W + PE + GR+++++SPR
Sbjct: 130 FDPTNK-YSVPYAYTLTLLGFNTNKVQELGL-PTDTWAIIFEPEYLQKIKGRVTVLDSPR 187
Query: 283 EVIVAG----GKIAVQQNLALLANQVR-----------LFDSTHYLKAFGIGDVWVAVGW 327
E++ A G A Q+ + NQ + F +T Y++ IGD+WV G+
Sbjct: 188 ELMAAALLYLGYAANDQD-EVHWNQAKELIIRAKPYWAAFSNTSYIREIAIGDLWVVHGY 246
Query: 328 SSDVLPAVKRMSNVAVVVPKSGASLWADLWAIP---AASRLETKQIGGQVRGPSPLIHQW 384
S+D+ A A+ K+G D +AIP A L++ + + P L HQ+
Sbjct: 247 SNDLFQA-------ALDAKKTGRHFTID-YAIPKQGAVMSLDSMVLHKSGKHPG-LAHQF 297
Query: 385 IEFCL 389
I F L
Sbjct: 298 INFML 302
>gi|385787871|ref|YP_005818980.1| putrescine ABC transporter periplasmic-binding protein [Erwinia sp.
Ejp617]
gi|310767143|gb|ADP12093.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Erwinia sp. Ejp617]
Length = 369
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 88/217 (40%), Gaps = 36/217 (16%)
Query: 228 DPRGKIWAAPYRWGTMAIGY--KKSKFQNHNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP G +A PY W T IGY +K K AP+ W PE R +S +++
Sbjct: 123 DP-GNKYAIPYLWATTGIGYNVEKVKAALGKDAPVNSWDLVLKPENLARLKSCGVSFLDA 181
Query: 281 PREVIVA----GGKI-----------AVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAV 325
P E+ GK A L L +R F S+ Y+ G++ VA+
Sbjct: 182 PEEIFATVLNYQGKDPNSSDAKDYSGAATDLLLKLRPNIRYFHSSQYINDLANGNICVAI 241
Query: 326 GWSSDVLPAVKRM------SNVAVVVPKSGASLWADLWAIP--AASRLETKQIGGQVRGP 377
GW+ DVL A R ++A +PK GA + D AIP A + E Q + P
Sbjct: 242 GWAGDVLQAKNRALAAKNGVDIAYSIPKEGALAFFDTLAIPKDAKNVDEAYQFLNYLLKP 301
Query: 378 SPL--IHQWIEFCLQTARALPFKQEVI---PGASPSA 409
+ I + + ++PF I PG P A
Sbjct: 302 EVMAQISNAVFYASGNKASVPFVDAAIRNNPGVYPPA 338
>gi|170717788|ref|YP_001784852.1| extracellular solute-binding protein [Haemophilus somnus 2336]
gi|168825917|gb|ACA31288.1| extracellular solute-binding protein family 1 [Haemophilus somnus
2336]
Length = 348
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 74/174 (42%), Gaps = 20/174 (11%)
Query: 208 FKRLSHKWKVYLRSNDAGEID---PRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWK 264
K L H ++ D +D +G ++ P +G IGY + N ++ W
Sbjct: 96 LKELDHSKLPVIKELDPNMLDRPFDKGNKYSLPQLFGATGIGYNTD---SQNPEQLQSWG 152
Query: 265 DPWWPELAGRISMVNSPREVI-VAGGKIA-------------VQQNLALLANQVRLFDST 310
D W PE A ++ M++ PRE+ +A K+ Q L L + +F+S
Sbjct: 153 DLWNPEFANKLQMLDDPRELFNIALLKMGENPNTQDPKVIEKAYQELLKLRPNILVFNSD 212
Query: 311 HYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 364
+ F G+ V + W+ + A + +V PK G LW D AIPA ++
Sbjct: 213 NPANTFITGETDVGLIWNGSIRVAQNAGVPIKIVYPKEGTMLWIDNLAIPATAK 266
>gi|378955758|ref|YP_005213245.1| putrescine-binding periplasmic protein [Salmonella enterica subsp.
enterica serovar Gallinarum/pullorum str. RKS5078]
gi|357206369|gb|AET54415.1| putrescine-binding periplasmic protein precursor [Salmonella
enterica subsp. enterica serovar Gallinarum/pullorum
str. RKS5078]
Length = 371
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 72/165 (43%), Gaps = 29/165 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP K +A PY W T IGY K + + AP+ W PE + +S +++
Sbjct: 125 DPDNK-YAMPYMWATTGIGYNVDKVKAVLGDDAPVNSWDLVLKPENLEKLKSCGVSFLDA 183
Query: 281 PREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAV 325
P E+ A +L L L +R F S+ Y+ GD VA+
Sbjct: 184 PEEIFATVLNYLGKDPNSSKADDYTGPATDLLLRLRPNIRYFHSSQYINDLANGDTCVAI 243
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
GW+ DV A R N++ +PK GA + D++A+PA ++
Sbjct: 244 GWAGDVWQAANRAKEAKNGVNISFSIPKEGAMAFFDVFAMPADAK 288
>gi|389690758|ref|ZP_10179651.1| spermidine/putrescine-binding periplasmic protein [Microvirga sp.
WSM3557]
gi|388589001|gb|EIM29290.1| spermidine/putrescine-binding periplasmic protein [Microvirga sp.
WSM3557]
Length = 361
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 73/166 (43%), Gaps = 31/166 (18%)
Query: 227 IDPRGKIWAAPYRWGTMAIGYKKSKFQN-HNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP G +A Y WGT IG K + P+ W PE+A + I M++S
Sbjct: 116 FDP-GNQYAVNYMWGTTGIGLNVKKVKEILGDMPLNTWDLVLKPEIASKLKACGIYMLDS 174
Query: 281 PREVIVAGGKIA----------------VQQNLALLANQVRLFDSTHYLKAFGIGDVWVA 324
P ++ G +A L + ++ F S+ Y+ A GD+ VA
Sbjct: 175 PEDLF--PGVLAYLGLNPDSKRTEDLNKAGDALFRIRGNIQKFHSSEYINALANGDICVA 232
Query: 325 VGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
VG+S D++ A R V V+P+ GA +W D +AIPA ++
Sbjct: 233 VGYSGDMIQAKNRAEEAKNGVEVGYVIPREGALMWFDSFAIPADAK 278
>gi|417364520|ref|ZP_12137419.1| Putrescine ABC transporter putrescine-binding protein PotF, partial
[Salmonella enterica subsp. enterica serovar
Hvittingfoss str. A4-620]
gi|353596944|gb|EHC53803.1| Putrescine ABC transporter putrescine-binding protein PotF, partial
[Salmonella enterica subsp. enterica serovar
Hvittingfoss str. A4-620]
Length = 347
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 72/165 (43%), Gaps = 29/165 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP K +A PY W T IGY K + + AP+ W PE + +S +++
Sbjct: 125 DPDNK-YAMPYMWATTGIGYNVDKVKAVLGDDAPVNSWDLVLKPENLEKLKSCGVSFLDA 183
Query: 281 PREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAV 325
P E+ A +L L L +R F S+ Y+ GD VA+
Sbjct: 184 PEEIFATVLNYLGKDPNSSKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDTCVAI 243
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
GW+ DV A R N++ +PK GA + D++A+PA ++
Sbjct: 244 GWAGDVWQAANRAKEAKNGVNISFSIPKEGAMAFFDVFAMPADAK 288
>gi|261821238|ref|YP_003259344.1| putrescine ABC transporter periplasmic-binding protein
[Pectobacterium wasabiae WPP163]
gi|261605251|gb|ACX87737.1| extracellular solute-binding protein family 1 [Pectobacterium
wasabiae WPP163]
Length = 369
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 72/165 (43%), Gaps = 29/165 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGY--KKSKFQNHNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP K +A PY W T IGY +K K AP++ W PE + +S +++
Sbjct: 123 DPDNK-YALPYLWATTGIGYNVEKVKAALGADAPVDSWDLVLKPENLEKLKSCGVSFLDA 181
Query: 281 PREVIVA--------------GGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAV 325
P E+ G +L L L +R F S+ Y+ GD+ VAV
Sbjct: 182 PEEIFATVLNYQGKDPNSTKPGDYSTSATDLLLKLRPSIRYFHSSQYINDLANGDICVAV 241
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
GW+ D++ A R N+ +PK GA + D+ AIP ++
Sbjct: 242 GWAGDIMQAGNRAKEAKNGVNIQYSIPKEGALAFFDVLAIPKDAK 286
>gi|238757952|ref|ZP_04619134.1| Putrescine-binding periplasmic protein [Yersinia aldovae ATCC
35236]
gi|238703937|gb|EEP96472.1| Putrescine-binding periplasmic protein [Yersinia aldovae ATCC
35236]
Length = 369
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 73/165 (44%), Gaps = 29/165 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGY--KKSKFQNHNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP K +A PY W T IGY +K K AP+ W PE + +S +++
Sbjct: 123 DPDNK-YAIPYLWATTGIGYNVEKVKAALGQDAPVNSWDLVLKPENLEKLKSCGVSFLDA 181
Query: 281 PREV--------------IVAGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAV 325
P E+ I A L L L +R F S+ Y+ GD+ VAV
Sbjct: 182 PSEIFATVLNYLGKDPNSIQATDYTGPATELLLKLRPNIRYFHSSQYINDLANGDICVAV 241
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
GW+ D++ A R NVA +PK G + D++A+P+ ++
Sbjct: 242 GWAGDIMQASNRAKEAKNGVNVAYSIPKEGVLAFFDVFAMPSDAK 286
>gi|398844173|ref|ZP_10601270.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM84]
gi|398254831|gb|EJN39891.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM84]
Length = 367
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 83/190 (43%), Gaps = 39/190 (20%)
Query: 227 IDPRGKIWAAPYRWGTMAIGYKKSKF-QNHNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP G +++APY WG+ I Y K Q API + P++ R ++++++
Sbjct: 122 FDP-GMVYSAPYTWGSSGITYNVDKIKQRMPDAPIGSLAMLFDPKIVSRFADCGVTIMDA 180
Query: 281 PREVIVAGGKI--------------AVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVG 326
P EVI K A Q L + ++ FDS +YL + GDV +A+
Sbjct: 181 PSEVIPLALKYLGKDPQSAKPADLKAAQDVLMGIRPYIKKFDSVNYLTSLPNGDVCMALT 240
Query: 327 WSSDVLPA------VKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGQVRGPSPL 380
WS D A K+ N+A +PK G+ +W D +P + +
Sbjct: 241 WSGDYATAQARAVEAKKDINLAFFIPKEGSLIWFDSLYLPN----DAPHVANA------- 289
Query: 381 IHQWIEFCLQ 390
H++IE+ LQ
Sbjct: 290 -HRFIEYLLQ 298
>gi|417254724|ref|ZP_12046475.1| putrescine-binding periplasmic protein [Escherichia coli 4.0967]
gi|419288390|ref|ZP_13830500.1| potF [Escherichia coli DEC11A]
gi|419293742|ref|ZP_13835797.1| potF [Escherichia coli DEC11B]
gi|378135268|gb|EHW96580.1| potF [Escherichia coli DEC11A]
gi|378145241|gb|EHX06407.1| potF [Escherichia coli DEC11B]
gi|386215006|gb|EII31503.1| putrescine-binding periplasmic protein [Escherichia coli 4.0967]
Length = 370
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 73/166 (43%), Gaps = 31/166 (18%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQ---NHNLAPIEDWKDPWWPELAGR-----ISMVN 279
DP K +A PY W T IGY K + N AP++ W PE + +S ++
Sbjct: 124 DPDNK-FAMPYMWATTGIGYNVDKVKAVLGEN-APVDSWDLILKPENLEKLKSCGVSFLD 181
Query: 280 SPREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVA 324
+P EV A +L L L +R F S+ Y+ GD+ VA
Sbjct: 182 APEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVA 241
Query: 325 VGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
+GW+ DV A R NV +PK GA + D++A+PA ++
Sbjct: 242 IGWAGDVWQASNRAKEAKNGVNVLFSIPKEGAMAFFDVFAMPADAK 287
>gi|421600517|ref|ZP_16043511.1| hypothetical protein BCCGELA001_21544 [Bradyrhizobium sp.
CCGE-LA001]
gi|404267373|gb|EJZ32059.1| hypothetical protein BCCGELA001_21544 [Bradyrhizobium sp.
CCGE-LA001]
Length = 350
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 74/165 (44%), Gaps = 30/165 (18%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAP---IEDWKDPWWPELAGR-----ISMVN 279
DP G +AA Y WGT IGY +K + L P I+ W + PE + + M++
Sbjct: 105 DP-GNDYAANYMWGTTGIGYNVAKVK-QILGPDAKIDSWDIVFKPENLAKFRDCGVHMLD 162
Query: 280 SPREVIVAGGKI-------AVQQNLALLAN-------QVRLFDSTHYLKAFGIGDVWVAV 325
S ++ A Q +L A+ VR F S+ YL A G++ V
Sbjct: 163 SADDIFPAALNYLGLDPNSTKQADLEKAADAVAKVRPSVRKFHSSEYLSALATGEICFVV 222
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
GWS D++ A R + + VPK GA ++ D AIPA ++
Sbjct: 223 GWSGDIMQARARAAEAKSGVEIGYAVPKEGAQMFFDNLAIPADAK 267
>gi|397167724|ref|ZP_10491164.1| putrescine-binding periplasmic protein [Enterobacter radicincitans
DSM 16656]
gi|396090542|gb|EJI88112.1| putrescine-binding periplasmic protein [Enterobacter radicincitans
DSM 16656]
Length = 370
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 71/165 (43%), Gaps = 29/165 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP G +A PY W T IGY K + AP+ W PE + +S +++
Sbjct: 124 DP-GNKYAMPYLWATTGIGYNIDKVKAALGKDAPVNSWDLVLKPENLEKLKSCGVSFLDA 182
Query: 281 PREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAV 325
P E+ A +L L L +R F S+ Y+ GD+ VA+
Sbjct: 183 PEEIFATVLNYLGKDPNSNKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 242
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
GW+ DV A R NV +PK GA + D++A+PA ++
Sbjct: 243 GWAGDVWQAANRAKEAKNGVNVTYTIPKEGALAFFDVFAMPADAK 287
>gi|438130582|ref|ZP_20873498.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Pullorum str. ATCC 9120]
gi|434941649|gb|ELL48063.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Pullorum str. ATCC 9120]
Length = 370
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 72/165 (43%), Gaps = 29/165 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP K +A PY W T IGY K + + AP+ W PE + +S +++
Sbjct: 124 DPDNK-YAMPYMWATTGIGYNVDKVKAVLGDDAPVNSWDLVLKPENLEKLKSCGVSFLDA 182
Query: 281 PREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAV 325
P E+ A +L L L +R F S+ Y+ GD VA+
Sbjct: 183 PEEIFATVLNYLGKDPNSSKADDYTGPATDLLLRLRPNIRYFHSSQYINDLANGDTCVAI 242
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
GW+ DV A R N++ +PK GA + D++A+PA ++
Sbjct: 243 GWAGDVWQAANRAKEAKNGVNISFSIPKEGAMAFFDVFAMPADAK 287
>gi|420335058|ref|ZP_14836674.1| putrescine-binding periplasmic protein [Shigella flexneri K-315]
gi|391266552|gb|EIQ25501.1| putrescine-binding periplasmic protein [Shigella flexneri K-315]
Length = 370
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 72/165 (43%), Gaps = 29/165 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP K +A PY W T IGY K + AP++ W PE + +S +++
Sbjct: 124 DPDNK-FAMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDA 182
Query: 281 PREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAV 325
P EV A +L L L +R F S+ Y+ GD+ VA
Sbjct: 183 PEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAT 242
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 243 GWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|335035434|ref|ZP_08528775.1| ABC transporter, substrate binding protein (putrescine)
[Agrobacterium sp. ATCC 31749]
gi|333793201|gb|EGL64557.1| ABC transporter, substrate binding protein (putrescine)
[Agrobacterium sp. ATCC 31749]
Length = 365
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 75/168 (44%), Gaps = 37/168 (22%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQNH-NLAPIEDWKDPWWPELAGR-----ISMVNSP 281
DP G +A Y WGT IGY +K + P++ W + PE A + I+++++
Sbjct: 121 DP-GNEYAVNYMWGTTGIGYNVAKVKAALGDVPVDSWDVLFKPENAEKLKSCGINVLDAS 179
Query: 282 REVIV-------------------AGGKIAVQQNLALLANQVRLFDSTHYLKAFGIGDVW 322
E AGG++ + + V+ F+S+ Y+ GD
Sbjct: 180 DETFAIAMNYLGKNPDSKETADLEAGGEV-----YSKIRPYVKTFNSSPYINDLANGDTC 234
Query: 323 VAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
+++GWS D+L A R V V+PK G +W D +AIPA ++
Sbjct: 235 ISIGWSGDILQAKTRAEEAKNGVEVNYVIPKEGTYIWMDSFAIPADAK 282
>gi|333899501|ref|YP_004473374.1| extracellular solute-binding protein [Pseudomonas fulva 12-X]
gi|333114766|gb|AEF21280.1| extracellular solute-binding protein family 1 [Pseudomonas fulva
12-X]
Length = 358
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 72/160 (45%), Gaps = 28/160 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGRIS------MVN 279
DP G PY WG+ IGY K + + P++ W + PEL ++S + N
Sbjct: 113 DP-GNKHGFPYLWGSTGIGYNVEKVKAVLGDDVPLDSWDLIFKPELMAKLSKCGVAILDN 171
Query: 280 SPREVIVAGGKIAVQQN-------------LALLANQVRLFDSTHYLKAFGIGDVWVAVG 326
P + +A + + + L + V F S+ Y+ GDV +AVG
Sbjct: 172 GPEMLPIALHYLGLPHHSQKPEDYKKAEALLMEMRKNVAYFHSSKYVGELANGDVCMAVG 231
Query: 327 WSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIP 360
+S D++ A R ++A V+PK GA +W D+ A+P
Sbjct: 232 FSGDIMQASARAKEAGNGVDIAYVIPKEGAPMWFDMVAMP 271
>gi|418293171|ref|ZP_12905090.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas stutzeri ATCC 14405 = CCUG 16156]
gi|379064573|gb|EHY77316.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas stutzeri ATCC 14405 = CCUG 16156]
Length = 365
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 89/206 (43%), Gaps = 32/206 (15%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP G ++ PY WGT+ IGY K + + AP++ W + PE + ++ ++S
Sbjct: 120 DP-GNQYSIPYMWGTIGIGYNVDKVKAVLGDNAPVDSWDLVFKPENIEKLKSCGVAFLDS 178
Query: 281 PREVIVAG----------GKIAVQQNLALLANQVR----LFDSTHYLKAFGIGDVWVAVG 326
P E++ A GK + L Q+R F S+ Y+ G++ VA+G
Sbjct: 179 PTEMLPAALHYLGYAPDSGKADELKKAEELFMQIRPHVAYFHSSKYISDLANGNICVAIG 238
Query: 327 WSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR--LETKQIGGQVRGPS 378
+S D+ R NV +P+ GA + D+ A+PA ++ + P
Sbjct: 239 YSGDIYQGKSRAEEAANGVNVGYKIPQQGAGSFFDMLAVPADAKNVANAHVFLNYLMKPE 298
Query: 379 PL--IHQWIEFCLQTARALPFKQEVI 402
+ I +++F A A P E I
Sbjct: 299 VMASITDYVQFPNGNAAATPLLDEAI 324
>gi|222147628|ref|YP_002548585.1| ABC transporter substrate binding protein (putrescine)
[Agrobacterium vitis S4]
gi|221734616|gb|ACM35579.1| ABC transporter substrate binding protein (putrescine)
[Agrobacterium vitis S4]
Length = 371
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 74/164 (45%), Gaps = 28/164 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGY--KKSKFQNHNLAPIEDWKDPWWPELAGRI-----SMVNS 280
DP G +A Y WGT IGY KK K + ++ W + PE A ++ +++++
Sbjct: 126 DP-GNQYAVNYMWGTTGIGYNVKKIKAIFGDDVKVDSWDFIFKPENAKKLKQCGLNILDA 184
Query: 281 PREVIVAG----GKIAVQQNLALLANQVRL----------FDSTHYLKAFGIGDVWVAVG 326
E GK A + A L ++ F+S+ YL GD+ +G
Sbjct: 185 SDETFAIAMNYIGKPADSKKTADLEAGAKVYQAIRPSAKTFNSSSYLNDLANGDICATIG 244
Query: 327 WSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
WS DV+ A KR +A V+PK G +W D AIPA ++
Sbjct: 245 WSGDVIQAKKRAEEAKNGVEIAYVIPKEGTYMWFDNLAIPADAK 288
>gi|157146493|ref|YP_001453812.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Citrobacter koseri ATCC BAA-895]
gi|157083698|gb|ABV13376.1| hypothetical protein CKO_02253 [Citrobacter koseri ATCC BAA-895]
Length = 370
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 72/165 (43%), Gaps = 29/165 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP K +A PY W T IGY K + AP++ W PE + +S +++
Sbjct: 124 DPDNK-YAMPYMWATTGIGYNIDKVKAVLGADAPVDSWDLVLKPENLEKLKSCGVSFLDA 182
Query: 281 PREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAV 325
P EV A +L L L +R F S+ Y+ GD VA+
Sbjct: 183 PEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDTCVAI 242
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
GW+ DV A R N++ +PK GA + D++A+PA ++
Sbjct: 243 GWAGDVWQAANRAKEAKNGVNISFSIPKEGAMAFFDVFAMPADAK 287
>gi|385871473|gb|AFI89993.1| Putrescine ABC transporter, periplasmic putrescine-binding protein
[Pectobacterium sp. SCC3193]
Length = 369
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 72/165 (43%), Gaps = 29/165 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGY--KKSKFQNHNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP K +A PY W T IGY +K K AP++ W PE + +S +++
Sbjct: 123 DPDNK-YALPYLWATTGIGYNVEKVKAALGADAPVDSWDLVLKPENLEKLKSCGVSFLDA 181
Query: 281 PREVIVA--------------GGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAV 325
P E+ G +L L L +R F S+ Y+ GD+ VAV
Sbjct: 182 PEEIFATVLNYQGKDPNSTKPGDYSTSATDLLLKLRPSIRYFHSSQYINDLANGDICVAV 241
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
GW+ D++ A R N+ +PK GA + D+ AIP ++
Sbjct: 242 GWAGDIMQAGNRAKEAKNGVNIQYSIPKEGALAFFDVLAIPKDAK 286
>gi|388542821|ref|ZP_10146113.1| protein SpuD/PotF1 [Pseudomonas sp. M47T1]
gi|388278907|gb|EIK98477.1| protein SpuD/PotF1 [Pseudomonas sp. M47T1]
Length = 365
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 73/153 (47%), Gaps = 27/153 (17%)
Query: 235 AAPYRWGTMAIGY--KKSKFQNHNLAPIEDWKDPWWPELAGR-----ISMVNSPREVIVA 287
A PY WGT+ IGY +K K AP+ W + PE A + IS ++SP E+I A
Sbjct: 126 AFPYMWGTIGIGYNPEKVKAALGADAPVNSWDLVFKPENAAKLKGCGISFLDSPTEMIPA 185
Query: 288 -----GGKIAVQ--------QNLAL-LANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLP 333
G K Q ++L L + + F S+ Y+ G++ VAVG+S DV
Sbjct: 186 ALHYLGFKTDTQNKDEIKKAEDLFLKIRPSIAYFHSSKYISDLANGNICVAVGYSGDVKQ 245
Query: 334 AVKRMS------NVAVVVPKSGASLWADLWAIP 360
A R +V+ +PK GA + D+ AIP
Sbjct: 246 AASRAKEAGDKVHVSYSIPKEGAGSFYDMVAIP 278
>gi|409422830|ref|ZP_11259910.1| periplasmic putrescine-binding protein [Pseudomonas sp. HYS]
Length = 362
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 69/166 (41%), Gaps = 40/166 (24%)
Query: 235 AAPYRWGTMAIGYKKSK----------------FQNHNLAPIE-------DWKDPWWPEL 271
+ PY WGT IGY K F+ NL + D D +P +
Sbjct: 124 SVPYLWGTNGIGYNVDKVKQVLGVDHVDSWAVMFEPENLKKLSQCGVSFMDSADELFPAI 183
Query: 272 AGRISM---VNSPREVIVAGGKIAVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWS 328
+ M N+P + A K L L + F S+ Y+ GD+ VA G+S
Sbjct: 184 LNYMGMDPRSNNPEDYKKAEAK------LLTLRPYITYFHSSKYVSDLANGDICVAFGYS 237
Query: 329 SDVLPAVKRMS------NVAVVVPKSGASLWADLWAIP--AASRLE 366
DV A R N+A +PK G++LW DL AIP A++R E
Sbjct: 238 GDVFQAANRAKEAKNGVNIAYAIPKEGSNLWFDLLAIPSDASNRKE 283
>gi|421078994|ref|ZP_15539939.1| Putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Pectobacterium wasabiae CFBP 3304]
gi|401706181|gb|EJS96359.1| Putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Pectobacterium wasabiae CFBP 3304]
Length = 369
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 72/165 (43%), Gaps = 29/165 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGY--KKSKFQNHNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP K +A PY W T IGY +K K AP++ W PE + +S +++
Sbjct: 123 DPDNK-YALPYLWATTGIGYNVEKVKAALGADAPVDSWDLVLKPENLEKLKSCGVSFLDA 181
Query: 281 PREVIVA--------------GGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAV 325
P E+ G +L L L +R F S+ Y+ GD+ VAV
Sbjct: 182 PEEIFATVLNYQGKDPNSTKPGDYSTSATDLLLKLRPSIRYFHSSQYINDLANGDICVAV 241
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
GW+ D++ A R N+ +PK GA + D+ AIP ++
Sbjct: 242 GWAGDIMQAGNRAKEAKNGVNIQYSIPKEGALAFFDVLAIPKDAK 286
>gi|408482246|ref|ZP_11188465.1| putrescine ABC transporter substrate-binding protein [Pseudomonas
sp. R81]
Length = 362
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 75/180 (41%), Gaps = 32/180 (17%)
Query: 208 FKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIGYKKSKFQN-HNLAPIEDWKDP 266
FK L K L ND G + PY WGT IGY K + + I+ W
Sbjct: 103 FKNLDPKLLKLLEKNDPGNAH------SVPYLWGTNGIGYNVDKVKEVLGIDAIDSWAVL 156
Query: 267 WWPELAGR-----ISMVNSPREVIVA----GGKIAVQQN----------LALLANQVRLF 307
+ PE + ++ ++S E+ A GK +N L L + F
Sbjct: 157 FEPENIKKLNQCGVAFLDSADELFPAILNYMGKDPRSENPEDYKQAEAKLLTLRPYITYF 216
Query: 308 DSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIPA 361
S+ Y+ G++ VA G+S DV A R +A +PK G++LW DL AIPA
Sbjct: 217 HSSKYISDLANGNICVAFGYSGDVFQAANRAKEAKNGVKIAYSIPKEGSNLWFDLLAIPA 276
>gi|417711617|ref|ZP_12360616.1| putrescine-binding periplasmic protein [Shigella flexneri K-272]
gi|333008839|gb|EGK28299.1| putrescine-binding periplasmic protein [Shigella flexneri K-272]
Length = 370
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 72/165 (43%), Gaps = 29/165 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP K +A PY W T IGY K + AP++ W PE + +S ++
Sbjct: 124 DPDNK-FAMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFQDA 182
Query: 281 PREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAV 325
P EV A +L L L +R F S+ Y+ GD+ VA+
Sbjct: 183 PEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 242
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 243 GWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|302189523|ref|ZP_07266196.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas syringae pv. syringae 642]
Length = 364
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 70/163 (42%), Gaps = 27/163 (16%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQNH-NLAPIEDWKDPWWPELAGRIS-----MVNSP 281
DP G +A PY WGT IGY K + + I+ W + PE ++S ++S
Sbjct: 120 DP-GNQYAVPYLWGTNGIGYNVEKVKAALGVDKIDSWAVLFEPENIKKLSSCGVAFLDSA 178
Query: 282 REVIVA--------------GGKIAVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGW 327
E++ A + L + V F S+ Y+ GD+ VA G+
Sbjct: 179 DEMLPAVLNYMGLDPNSTKEADYKKAEAKLLAIRPYVTYFHSSKYITDLANGDICVAAGF 238
Query: 328 SSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIPAASR 364
S DV A R +A +PK G +LW D+ AIPA S+
Sbjct: 239 SGDVFQAKSRAEEAGKGVKIAYSIPKEGGNLWFDMLAIPADSK 281
>gi|381205079|ref|ZP_09912150.1| extracellular solute-binding protein [SAR324 cluster bacterium
JCVI-SC AAA005]
Length = 360
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 70/156 (44%), Gaps = 28/156 (17%)
Query: 227 IDPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWP-----ELAGRISMVNSP 281
DP+ + ++ PY WGT+ IGY+KSK + D W E +GRI+++NSP
Sbjct: 131 FDPK-RAYSMPYMWGTVGIGYRKSK--------VSKVPDSWASLFASSEYSGRIALLNSP 181
Query: 282 REVI-----VAGGKIAVQQNLALLANQVRLFDSTHYLKAFG---------IGDVWVAVGW 327
E I G I + + + + ++K F G+V + + +
Sbjct: 182 SETIPIAMKYLGHSINTADSEVVQTVEDLMIKQKKHIKVFAEDNGQDLLLSGEVDLTMEY 241
Query: 328 SSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAAS 363
+ D++ + ++A +VPK G LW D IP +
Sbjct: 242 NGDIIQVQEEDDDIAYIVPKEGTLLWEDCLCIPKGA 277
>gi|147334|gb|AAA24409.1| periplasmic putrescine binding protein [Escherichia coli]
Length = 370
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 73/165 (44%), Gaps = 29/165 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP K +A PY W T IGY K + AP++ W PE + +S +++
Sbjct: 124 DPDNK-FAMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDA 182
Query: 281 PREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAV 325
P EV A +L L + +R F S+ Y+ GD+ VA+
Sbjct: 183 PEEVFATVLNYLGKDPNSTKADDYTGPATDLLLNVRPNIRYFHSSQYINDLANGDICVAI 242
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 243 GWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|423119457|ref|ZP_17107141.1| putrescine-binding periplasmic protein [Klebsiella oxytoca 10-5246]
gi|376398515|gb|EHT11140.1| putrescine-binding periplasmic protein [Klebsiella oxytoca 10-5246]
Length = 370
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 72/165 (43%), Gaps = 29/165 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP K +A PY W T IGY K + AP+ W PE + +S +++
Sbjct: 124 DPDNK-YAMPYLWATTGIGYNVDKVKAVLGKDAPLNSWDLVLKPENLEKLKSCGVSFLDA 182
Query: 281 PREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAV 325
P E+ A +L L L +R F S+ Y+ GD+ VA+
Sbjct: 183 PEEIFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 242
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 243 GWAGDVWQAANRAKEAKNGVNVSYFIPKEGALAFFDVFAMPADAK 287
>gi|330501319|ref|YP_004378188.1| extracellular solute-binding protein [Pseudomonas mendocina NK-01]
gi|328915605|gb|AEB56436.1| extracellular solute-binding protein [Pseudomonas mendocina NK-01]
Length = 363
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 71/164 (43%), Gaps = 26/164 (15%)
Query: 226 EIDPRGKIWAAPYRWGTMAIGYKKSKFQNH-NLAPIEDWKDPWWPELAGRIS-----MVN 279
E + G +A PY WGT IGY K + + I+ W + PE ++S ++
Sbjct: 116 ETNDPGNQYAVPYLWGTNGIGYNVEKVKAALGVDEIDSWAVLFEPENIKKLSQCGVAFLD 175
Query: 280 SPREVIVA--------------GGKIAVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAV 325
S E+I A + L + V F S+ Y+ G++ VA
Sbjct: 176 SGDEMIPAMLNYLGMDPNSTNPDDYAKAEAKLLEVRPYVTYFHSSKYIGDLANGNICVAA 235
Query: 326 GWSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIPAAS 363
G+S D+L A R +A +PK GA+LW D+ AIPA S
Sbjct: 236 GFSGDILQAADRAEEAGKGIEIAYSIPKEGANLWFDMMAIPADS 279
>gi|114705308|ref|ZP_01438216.1| putrescine-binding periplasmic protein [Fulvimarina pelagi
HTCC2506]
gi|114540093|gb|EAU43213.1| putrescine-binding periplasmic protein [Fulvimarina pelagi
HTCC2506]
Length = 365
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 73/162 (45%), Gaps = 30/162 (18%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQNHNLA---PIEDWKDPWWPELAGRIS-----MVN 279
DP G +A Y WGT +G +K L P+ + + PEL +++ M+N
Sbjct: 120 DP-GNEYAVNYMWGTTGLGLN-TKMVKERLGEDQPLNTYDLLFDPELVSKLADCGVYMLN 177
Query: 280 SPREVIVAG-------------GKIAVQQNLALLAN-QVRLFDSTHYLKAFGIGDVWVAV 325
+ EV+ A + ++L L +R F+S+ Y+ A GD+ +A
Sbjct: 178 TSEEVVPAALNYLGLDPNSTNPDDLQKAEDLLLQVKPHIRKFNSSEYITALANGDICMAH 237
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPA 361
GWS D+L + R + V+PK GA +W D AIPA
Sbjct: 238 GWSGDILQSRDRAKEAGQGVEIQYVIPKEGAVIWVDNMAIPA 279
>gi|443472342|ref|ZP_21062371.1| Putrescine ABC transporter putrescine-binding protein PotF
[Pseudomonas pseudoalcaligenes KF707]
gi|442902684|gb|ELS28200.1| Putrescine ABC transporter putrescine-binding protein PotF
[Pseudomonas pseudoalcaligenes KF707]
Length = 364
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 70/169 (41%), Gaps = 32/169 (18%)
Query: 219 LRSNDAGEIDPRGKIWAAPYRWGTMAIGYKKSKFQNH-NLAPIEDWKDPWWPELAGRIS- 276
L NDAG +A PY WGT IGY K + + I+ W + PE ++S
Sbjct: 116 LERNDAG------NQYAVPYLWGTNGIGYNVEKVKAALGVDHIDSWAAIFEPENMKKLSQ 169
Query: 277 ----MVNSPREVIVA--------------GGKIAVQQNLALLANQVRLFDSTHYLKAFGI 318
++S E+I A + L + V F S+ Y+
Sbjct: 170 CGVAFLDSADEMIPAVLNYMGLDPNSTNPDDYKKAEAKLMAVRPYVTYFHSSKYIGDLAN 229
Query: 319 GDVWVAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIPA 361
GD+ VA G+S D+ A R +A +PK G +LW D+ A+PA
Sbjct: 230 GDICVAAGFSGDIFQAASRAEEAGKGIEIAYAIPKEGGNLWFDMLAVPA 278
>gi|70729704|ref|YP_259443.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas protegens Pf-5]
gi|68344003|gb|AAY91609.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas protegens Pf-5]
Length = 365
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 96/221 (43%), Gaps = 35/221 (15%)
Query: 235 AAPYRWGTMAIGYKKSKFQNH--NLAPIEDWKDPWWPELAGR-----ISMVNSPREVIVA 287
A PY WG++ IGY K + AP W + PE A + IS ++SP E++ A
Sbjct: 126 AFPYMWGSIGIGYNPDKVKAALGADAPTNSWDLLFKPENAEKLKACGISFLDSPTEMLPA 185
Query: 288 G-----------GKIAVQQNLALLAN---QVRLFDSTHYLKAFGIGDVWVAVGWSSDVLP 333
K + + AL V F S+ Y+ G++ VAVG+S DVL
Sbjct: 186 ALHYLGYPVTSKDKAQILEAEALFMKIRPSVTYFHSSKYISDLANGNICVAVGYSGDVLQ 245
Query: 334 AVKRMSN------VAVVVPKSGASLWADLWAIPA-ASRLETKQIGGQVRGPSPLIHQW-- 384
A R VA +PK GA + D+ AIP A+ ++ + + +I +
Sbjct: 246 ARSRAEEAGNKEKVAFSIPKEGAGSFYDMMAIPKDATNVDNAYLFMNFLMRADIIAEVTN 305
Query: 385 -IEFCLQTARALPFKQEVI---PGAS-PSALESTLVKLPEE 420
+ + A A P E I P + P A+ +TL +P++
Sbjct: 306 SLGYSNANAAATPLVDEAIRNDPASYPPQAVLATLYAVPDQ 346
>gi|433448387|ref|ZP_20411319.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Weissella ceti NC36]
gi|429539858|gb|ELA07892.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Weissella ceti NC36]
Length = 364
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 74/161 (45%), Gaps = 34/161 (21%)
Query: 226 EIDPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVI 285
+ DP+ ++ PY WGT+ I Y + I+ W D W PE +I +V+S R+++
Sbjct: 132 DFDPKN-TYSLPYFWGTLGIVYNDQMVDGN---KIKTWNDLWRPEFKKKIMLVDSARDIL 187
Query: 286 ----VAGGKIAVQQNL------------------ALLANQVRLFDSTHYLKAFGIGDVWV 323
V+ G +NL A++A++++++ + + + +
Sbjct: 188 GMTLVSNGASVNTKNLPELAAADGKLATLMPNVKAIVADEIKMYMAQN--------EAAI 239
Query: 324 AVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 364
AV +S + + R ++ VVPK G +LW D + IP R
Sbjct: 240 AVDYSGNAAEMMSRNEHLQYVVPKEGGNLWLDNFVIPKTVR 280
>gi|217974349|ref|YP_002359100.1| family 1 extracellular solute-binding protein [Shewanella baltica
OS223]
gi|217499484|gb|ACK47677.1| extracellular solute-binding protein family 1 [Shewanella baltica
OS223]
Length = 366
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 74/163 (45%), Gaps = 28/163 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYK--KSKFQNHNLAPIEDWKDPWWPELAGRIS-----MVNS 280
DP G +A PY WGT IGY K K AP + + P+ A +IS M++S
Sbjct: 121 DP-GNQYAVPYLWGTNGIGYNIDKVKAAVGEDAPFNSMELIFNPKYAEKISKCGFAMLDS 179
Query: 281 -----PREVIVAG-----GKIAVQQNLALLANQVR----LFDSTHYLKAFGIGDVWVAVG 326
P+ +I G + + L ++R F S+ Y+ GD+ VA G
Sbjct: 180 ADDMVPQALIYLGLDPNSANPSDYEKAGELLEKIRPYVTYFHSSRYISDLANGDICVAFG 239
Query: 327 WSSDVLPAVKRM------SNVAVVVPKSGASLWADLWAIPAAS 363
+S DV A R + + +PK GA+LW D+ AIPA S
Sbjct: 240 FSGDVFQAKARAEEAGNGNKIGYSIPKEGANLWFDMLAIPADS 282
>gi|308048856|ref|YP_003912422.1| extracellular solute-binding protein [Ferrimonas balearica DSM
9799]
gi|307631046|gb|ADN75348.1| extracellular solute-binding protein family 1 [Ferrimonas balearica
DSM 9799]
Length = 364
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 72/164 (43%), Gaps = 29/164 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYK---KSKFQNHNLAPIEDWKDPWWPELAGRI----SMVNS 280
DP G +A PY WGT +GY ++ + + W + PE+ +I + +N+
Sbjct: 120 DP-GNQFAVPYLWGTTGLGYNVEAMARIFGEDFE-VNSWDLVFKPEMISKIDCGVAFLNA 177
Query: 281 PREVIVAGGKIA--------------VQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVG 326
P E+I A ++ L + + F S+ ++ GD+ +AVG
Sbjct: 178 PSEIIPAAMHYLGMDPNSTNPKDVEPAEELLLKVRPYITYFHSSQFINDLANGDICLAVG 237
Query: 327 WSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
WS D+L A R + V+P+ G +W DL AIP +R
Sbjct: 238 WSGDILQAADRADEADNGITIEYVIPQEGTLVWFDLMAIPRDAR 281
>gi|429048944|ref|ZP_19113597.1| putrescine-binding periplasmic protein [Escherichia coli 97.0003]
gi|427304345|gb|EKW67002.1| putrescine-binding periplasmic protein [Escherichia coli 97.0003]
Length = 370
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 73/165 (44%), Gaps = 29/165 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP K +A PY W T IGY K + AP++ W PE + +S +++
Sbjct: 124 DPDNK-FAMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLIPKPENLEKLKSCGVSFLDA 182
Query: 281 PREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAV 325
P EV A +L L L +R F S+ Y+ GD+ VA+
Sbjct: 183 PEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 242
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 243 GWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|429210720|ref|ZP_19201886.1| extracellular solute-binding protein [Pseudomonas sp. M1]
gi|428158134|gb|EKX04681.1| extracellular solute-binding protein [Pseudomonas sp. M1]
Length = 365
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 70/161 (43%), Gaps = 26/161 (16%)
Query: 226 EIDPRGKIWAAPYRWGTMAIGYKKSKFQN-HNLAPIEDWKDPWWPELAGRIS-----MVN 279
E + G ++ PY WGT IGY K + + I+ W + PE ++S ++
Sbjct: 118 EANDPGNLYGVPYLWGTNGIGYNVDKVKAVLGVDKIDSWAVLFEPENMKKLSQCGVAFLD 177
Query: 280 SPREVIVAGGKI--------------AVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAV 325
S E++ A K + L + V F S+ Y+ G++ VA
Sbjct: 178 SGDEMMPAVLKYLGLDPNSTNPADYEKAEAKLMAVRPYVTYFHSSKYISDLANGNICVAA 237
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIP 360
G+S DV A R N+A +PK GA+LW D+ AIP
Sbjct: 238 GFSGDVFQAANRAKEAGKGVNIAYAIPKEGANLWFDILAIP 278
>gi|401871804|pdb|4GL0|A Chain A, Putative SpermidinePUTRESCINE ABC TRANSPORTER FROM
LISTERIA Monocytogenes
Length = 333
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 90/203 (44%), Gaps = 34/203 (16%)
Query: 234 WAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVIVAG----G 289
++ PY WGT+ I Y K F + N + W + PEL +I +++ REV G G
Sbjct: 108 YSXPYFWGTLGIIYNKEXFPDKNF---DTWNALFDPELKNQILLIDGAREVXGLGLNSLG 164
Query: 290 KIAVQQNLA-LLANQVRLFDSTHYLKAFGIGD----------VWVAVGWSSDVLPAVKRM 338
N A L A + +L T +KA +GD VAV +S + +
Sbjct: 165 YSLNDTNKAHLQAARDKLETXTPNVKAI-VGDEIKLLXADNEAGVAVTFSGEAAEXLSEN 223
Query: 339 SNVAVVVPKSGASLWADLWAIPAASRLETKQIGGQVRGPSPLIHQWIEFCLQTARALPFK 398
++ V+PK G++LW D IP + K + G H++I F L+ A
Sbjct: 224 EDLEYVIPKDGSNLWFDNXVIPKTA----KNVDGA--------HKFINFXLKPENA-AIN 270
Query: 399 QEVIPGASPSALESTLVKLPEEL 421
E + A+P+A L LP+E+
Sbjct: 271 AEYVGYATPNAKAVEL--LPKEI 291
>gi|13194613|gb|AAK15488.1|AF323694_3 PotF2 [Pseudomonas fluorescens]
Length = 365
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 70/159 (44%), Gaps = 27/159 (16%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN-HNLAPIEDWKDPWWPELAGR-----ISMVNSP 281
DP G +A PY WGT IGY K + + I+ W + PE + +S ++S
Sbjct: 121 DP-GNQYAVPYLWGTNGIGYNVEKIKAVLGVEKIDSWAMLFEPENIKKLSSCGVSFLDSG 179
Query: 282 REVIVAGGKI--------------AVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGW 327
E+I A + L + V F+S+ Y+ G++ VA G+
Sbjct: 180 DEMIPAMLNYLGLNPNSEDPEDYKKAEAQLLKIRPYVTYFNSSKYISDLANGEICVAAGF 239
Query: 328 SSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIP 360
S D+ A R S +A V+PK G +LW D+ AIP
Sbjct: 240 SGDIFQAAARASEAGKGVEIAYVIPKEGGNLWFDMLAIP 278
>gi|160874318|ref|YP_001553634.1| extracellular solute-binding protein [Shewanella baltica OS195]
gi|378707564|ref|YP_005272458.1| extracellular solute-binding protein [Shewanella baltica OS678]
gi|160859840|gb|ABX48374.1| extracellular solute-binding protein family 1 [Shewanella baltica
OS195]
gi|315266553|gb|ADT93406.1| extracellular solute-binding protein family 1 [Shewanella baltica
OS678]
Length = 366
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 74/163 (45%), Gaps = 28/163 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYK--KSKFQNHNLAPIEDWKDPWWPELAGRIS-----MVNS 280
DP G +A PY WGT IGY K K AP + + P+ A +IS M++S
Sbjct: 121 DP-GNQYAVPYLWGTNGIGYNIDKVKAAVGEDAPFNSMELIFNPKYAEKISKCGFAMLDS 179
Query: 281 -----PREVIVAG-----GKIAVQQNLALLANQVR----LFDSTHYLKAFGIGDVWVAVG 326
P+ +I G + + L ++R F S+ Y+ GD+ VA G
Sbjct: 180 ADDMVPQALIYLGLDPNSSNPSDYEKAGELLEKIRPYVTYFHSSRYISDLANGDICVAFG 239
Query: 327 WSSDVLPAVKRM------SNVAVVVPKSGASLWADLWAIPAAS 363
+S DV A R + + +PK GA+LW D+ AIPA S
Sbjct: 240 FSGDVFQAKARAEEAGNGNKIGYSIPKEGANLWFDMLAIPADS 282
>gi|237730837|ref|ZP_04561318.1| putrescine ABC transporter periplasmic substrate-binding protein
[Citrobacter sp. 30_2]
gi|365105624|ref|ZP_09334773.1| putrescine-binding periplasmic protein [Citrobacter freundii
4_7_47CFAA]
gi|226906376|gb|EEH92294.1| putrescine ABC transporter periplasmic substrate-binding protein
[Citrobacter sp. 30_2]
gi|363643138|gb|EHL82462.1| putrescine-binding periplasmic protein [Citrobacter freundii
4_7_47CFAA]
Length = 370
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 73/168 (43%), Gaps = 29/168 (17%)
Query: 225 GEIDPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISM 277
G+ DP K +A PY W T IGY K + AP+ W PE + +S
Sbjct: 121 GKHDPDNK-FAMPYMWATTGIGYNVDKVKAVLGPDAPVNSWDLILKPENLEKLKSCGVSF 179
Query: 278 VNSPREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVW 322
+++P EV A +L L L +R F S+ Y+ GD
Sbjct: 180 LDAPEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDTC 239
Query: 323 VAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
VA+GW+ DV A R N++ +PK GA + D++A+PA ++
Sbjct: 240 VAIGWAGDVWQAANRAKEAKNGVNISFSIPKEGAMAFFDVFAMPADAK 287
>gi|83645024|ref|YP_433459.1| spermidine/putrescine-binding periplasmic protein [Hahella
chejuensis KCTC 2396]
gi|83633067|gb|ABC29034.1| Spermidine/putrescine-binding periplasmic protein [Hahella
chejuensis KCTC 2396]
Length = 349
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 95/218 (43%), Gaps = 40/218 (18%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVIVA 287
DP + ++ PY WG+ IG + I WKD W P+ G + + + REV
Sbjct: 121 DPDNQ-YSIPYTWGSTGIGINAEAIDPKS---ITSWKDLWNPKWKGSLLLTDDVREVFHM 176
Query: 288 GGKI-----------AVQQNLALLAN---QVRLFDSTHYLKAFGIGDVWVAVGWSSDVLP 333
KI ++Q LL V +++S + + GDV + + W+ +V+
Sbjct: 177 ALKINGHSGNSTDPAEIKQAYELLKTLTPNVLVYNSDAPREPYMAGDVNLGMIWNGEVIQ 236
Query: 334 AVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGQVRGPSPLIHQWIEFCLQ--- 390
A + ++ + PK GA+ W D +AIPA + + + ++I+F LQ
Sbjct: 237 AQQENPDIQYIYPKEGAAFWVDSFAIPAGAENKENAL------------KFIDFMLQPEI 284
Query: 391 TARALPFKQEVIPGASPSALESTLVKLPEELLKGKPSV 428
R + F P + SAL+ L +E L+ P++
Sbjct: 285 AKRCVEFIGYATP--NKSALD-----LLDEKLRNNPTI 315
>gi|329927991|ref|ZP_08281995.1| putative spermidine/putrescine ABC transporter [Paenibacillus sp.
HGF5]
gi|328938095|gb|EGG34492.1| putative spermidine/putrescine ABC transporter [Paenibacillus sp.
HGF5]
Length = 350
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 89/213 (41%), Gaps = 30/213 (14%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVIVA 287
DP G ++ Y G I Y K ++ I W+D W PE G++ +++ RE+I
Sbjct: 123 DP-GNKYSIVYTSGVTGIAYNKKYVKDE----INSWEDLWNPEYKGKVLLLDDNREMIGM 177
Query: 288 GGK--------------IAVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLP 333
K A L L V FD+ + + + W+A WS D
Sbjct: 178 ALKKQGKSNSSTDEAEITAASDELKTLLPNVLAFDTDNIKQKMIQEEGWIATVWSGDAAF 237
Query: 334 AVKRMSNVAVVVPKSGASLWADLWAIPAASR---LETKQIGGQVR-GPSPLIHQWIEFCL 389
+VA VVP+ GA++++D +AIP ++ L K I + S +++I +
Sbjct: 238 IAAENPDVAYVVPEEGATIFSDNYAIPKGAKNKELAEKFINFMMEPEVSAKNYEFIGYSN 297
Query: 390 QTARALPFKQEVIPGASPSALESTLVKLPEELL 422
+A+ F E +T++ L EE L
Sbjct: 298 PNTKAMEFHSEEYRA-------NTMINLTEEEL 323
>gi|422648357|ref|ZP_16711480.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas syringae pv. maculicola str. ES4326]
gi|330961894|gb|EGH62154.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas syringae pv. maculicola str. ES4326]
Length = 364
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 70/164 (42%), Gaps = 29/164 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN-HNLAPIEDWKDPWWPELAGRIS---------- 276
DP G +A PY WGT IGY K + + I+ W + PE ++S
Sbjct: 120 DP-GNQYAVPYLWGTNGIGYNVDKVKAVLGVDKIDSWSVLFEPENIKKLSSCGVAFLDSA 178
Query: 277 ------MVN----SPREVIVAGGKIAVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVG 326
M+N P A K A + L + V F S+ Y+ GD+ VA G
Sbjct: 179 DEMLPAMLNYLGLDPNSTKEADYKKA-EAKLMAIRPYVTYFHSSKYITDLANGDICVAAG 237
Query: 327 WSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIPAASR 364
+S DV A R +A +PK G +LW D+ AIPA S+
Sbjct: 238 FSGDVFQAKSRAEEAGKGVKLAYSIPKEGGNLWFDMLAIPADSK 281
>gi|429210721|ref|ZP_19201887.1| polyamine transport protein [Pseudomonas sp. M1]
gi|428158135|gb|EKX04682.1| polyamine transport protein [Pseudomonas sp. M1]
Length = 366
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 76/162 (46%), Gaps = 27/162 (16%)
Query: 226 EIDPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMV 278
E+ G +A PY WGT+ IGY K + + AP++ W + PE + +S +
Sbjct: 118 EVSDPGNKFAIPYMWGTIGIGYNPDKVKAALGDGAPVDSWDLVFKPENIQKLKQCGVSFL 177
Query: 279 NSPREVIVAG-------------GKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVA 324
+SP E+I A +I + L L + + F S+ Y+ G++ VA
Sbjct: 178 DSPTEMIPAALHYLGYKPDSQDPKEIKAAEELFLKIRPYITYFHSSKYISDLANGNICVA 237
Query: 325 VGWSSDVLP----AVKRMSNVAVV--VPKSGASLWADLWAIP 360
+G+S D+ AV+ +NV V +PK GA + D AIP
Sbjct: 238 IGYSGDIYQAKSRAVEAKNNVKVAYHIPKEGAGAFFDTVAIP 279
>gi|398925409|ref|ZP_10661845.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM48]
gi|398172050|gb|EJM59932.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM48]
Length = 368
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 84/194 (43%), Gaps = 39/194 (20%)
Query: 223 DAGEIDPRGKIWAAPYRWGTMAIGYKKSKFQNHN-LAPIEDWKDPWWPELAGR-----IS 276
D DP G ++APY WG+ + Y K + API + P++ R ++
Sbjct: 119 DLQGFDP-GTTYSAPYTWGSNGVTYNVDKIKERMPDAPIGSLAMIFDPKIVSRFADCGVT 177
Query: 277 MVNSPREVI-------------VAGGKIAVQQNLALLAN-QVRLFDSTHYLKAFGIGDVW 322
++++P EVI A + Q+L L +R FDS +YL + GDV
Sbjct: 178 LLDAPTEVIPMALKYLGRDPNSAAPADLKAAQDLLLSVRPYIRKFDSVNYLTSLPNGDVC 237
Query: 323 VAVGWSSDV------LPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGQVRG 376
+A+ WS D K+ N+A +PK G+ +W D IPA + +
Sbjct: 238 MAMTWSGDYATAMARAAEAKKQINLAYFIPKEGSLIWFDNMYIPA----DAPHVANA--- 290
Query: 377 PSPLIHQWIEFCLQ 390
H+++E+ +Q
Sbjct: 291 -----HKFLEYLMQ 299
>gi|365881934|ref|ZP_09421216.1| putrescine ABC transporter, periplasmic binding protein
[Bradyrhizobium sp. ORS 375]
gi|365289791|emb|CCD93747.1| putrescine ABC transporter, periplasmic binding protein
[Bradyrhizobium sp. ORS 375]
Length = 368
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 88/202 (43%), Gaps = 36/202 (17%)
Query: 191 IKKRFIEPIAEAEDQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIGYKKS 250
IK + +P+ D+ L++ W V + DP G +AA Y WGT IGY
Sbjct: 92 IKAKIFQPL----DKSKLPNLANAWPVV--TERLAIYDP-GNQFAANYMWGTTGIGYNVK 144
Query: 251 KFQNHNLAP---IEDWKDPWWPELAGR-----ISMVNSPREVIVAG-GKIAVQQN----- 296
+ L P I+ W + PE + + M++S ++ A + + N
Sbjct: 145 TIEKI-LGPGARIDSWDMVFKPENLAKFKDCGVHMLDSADDIFPAALNYLGLDPNSTKQA 203
Query: 297 --------LALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVA 342
+ +A VR F S+ YL A G++ + VGWS D++ A R +
Sbjct: 204 DLEKAAEVVGKVAPSVRKFHSSEYLSALATGEICLVVGWSGDIMQARSRAEEAKNGIEIG 263
Query: 343 VVVPKSGASLWADLWAIPAASR 364
+PK GA ++ D +AIPA ++
Sbjct: 264 YAIPKEGAQMFFDNFAIPADAQ 285
>gi|261404067|ref|YP_003240308.1| family 1 extracellular solute-binding protein [Paenibacillus sp.
Y412MC10]
gi|261280530|gb|ACX62501.1| extracellular solute-binding protein family 1 [Paenibacillus sp.
Y412MC10]
Length = 350
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 89/213 (41%), Gaps = 30/213 (14%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVIVA 287
DP G ++ Y G I Y K ++ I W+D W PE G++ +++ RE+I
Sbjct: 123 DP-GNKYSIVYTSGVTGIAYNKKYVKDE----INSWEDLWNPEYKGKVLLLDDNREMIGM 177
Query: 288 GGK--------------IAVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLP 333
K A L L V FD+ + + + W+A WS D
Sbjct: 178 ALKKQGKSNSSTDEAEITAASDELKTLLPNVLAFDTDNIKQKMIQEEGWIATVWSGDAAF 237
Query: 334 AVKRMSNVAVVVPKSGASLWADLWAIPAASR---LETKQIGGQVR-GPSPLIHQWIEFCL 389
+VA VVP+ GA++++D +AIP ++ L K I + S +++I +
Sbjct: 238 IAAENPDVAYVVPEEGATIFSDNYAIPKGAKNKELAEKFINFMMEPEVSAKNYEFIGYSN 297
Query: 390 QTARALPFKQEVIPGASPSALESTLVKLPEELL 422
+A+ F E +T++ L EE L
Sbjct: 298 PNTKAMEFHSEEYRA-------NTMINLTEEEL 323
>gi|77458344|ref|YP_347849.1| extracellular solute-binding protein [Pseudomonas fluorescens
Pf0-1]
gi|77382347|gb|ABA73860.1| putative putrescine-binding periplasmic protein precursor
[Pseudomonas fluorescens Pf0-1]
Length = 365
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 98/221 (44%), Gaps = 35/221 (15%)
Query: 235 AAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNSPREVIVA 287
A PY WG++ IG+ K + AP W + PE A + IS ++SP E+I A
Sbjct: 126 AFPYMWGSIGIGFNPDKVKEVLGKNAPTNSWDLLFKPENAEKLKACGISFLDSPTEMIPA 185
Query: 288 G-----------GKIAVQQNLALLAN---QVRLFDSTHYLKAFGIGDVWVAVGWSSDVLP 333
+++ AL V F S+ Y+ G++ VAVG+S DVL
Sbjct: 186 ALHYLGYPVSDKDAAHIKEAEALFMKIRPNVAYFHSSKYISDLANGNICVAVGYSGDVLQ 245
Query: 334 ----AVKRMSNVAV--VVPKSGASLWADLWAIP-AASRLETKQIGGQVRGPSPLIHQWIE 386
AV+ +NV + +PK GA + D+ AIP A+ +E + +I +
Sbjct: 246 AKARAVESGNNVVIDYSIPKEGAGSFYDMVAIPRDAANVENAYLFMDFLMRPDIIAEITN 305
Query: 387 ---FCLQTARALPFKQEVI---PGASPS-ALESTLVKLPEE 420
+ A A P E I PG+ PS + +TL +P++
Sbjct: 306 SNGYSNANAAATPLVDEAIRNDPGSYPSQEVMATLYAVPDQ 346
>gi|260597254|ref|YP_003209825.1| putrescine ABC transporter periplasmic binding protein [Cronobacter
turicensis z3032]
gi|260216431|emb|CBA29533.1| Putrescine-binding periplasmic protein [Cronobacter turicensis
z3032]
Length = 393
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 77/185 (41%), Gaps = 31/185 (16%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQNH--NLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP K +A PY W T IGY K + P+ W PE + +S +++
Sbjct: 147 DPDNK-YAMPYLWATTGIGYNVDKVKAALGTDVPLNSWDLVLKPENLEKLKSCGVSFLDA 205
Query: 281 PREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAV 325
P E+ A +L L L +R F S+ Y+ GD+ VA+
Sbjct: 206 PEEIFATVLNYLGKDPNSSKADDYSGAATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 265
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIP--AASRLETKQIGGQVRGP 377
GW+ DV A R N++ +PK GA + D++A+P A ++ E Q + P
Sbjct: 266 GWAGDVWQAANRAKEAKNGVNISYTIPKEGALAFFDVFAMPADAKNKDEAYQFLNYLMRP 325
Query: 378 SPLIH 382
+ H
Sbjct: 326 DVMAH 330
>gi|373948568|ref|ZP_09608529.1| extracellular solute-binding protein family 1 [Shewanella baltica
OS183]
gi|386325590|ref|YP_006021707.1| extracellular solute-binding protein [Shewanella baltica BA175]
gi|333819735|gb|AEG12401.1| extracellular solute-binding protein family 1 [Shewanella baltica
BA175]
gi|373885168|gb|EHQ14060.1| extracellular solute-binding protein family 1 [Shewanella baltica
OS183]
Length = 366
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 74/163 (45%), Gaps = 28/163 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYK--KSKFQNHNLAPIEDWKDPWWPELAGRIS-----MVNS 280
DP G +A PY WGT IGY K K AP + + P+ A +IS M++S
Sbjct: 121 DP-GNQYAVPYLWGTNGIGYNIDKVKAAVGEDAPFNSMELIFNPKYAEKISKCGFAMLDS 179
Query: 281 -----PREVIVAG-----GKIAVQQNLALLANQVR----LFDSTHYLKAFGIGDVWVAVG 326
P+ +I G + + L ++R F S+ Y+ GD+ VA G
Sbjct: 180 ADDMVPQALIYLGLDPNSSNPSDYEKAGELLEKIRPYVTYFHSSRYISDLANGDICVAFG 239
Query: 327 WSSDVLPAVKRM------SNVAVVVPKSGASLWADLWAIPAAS 363
+S DV A R + + +PK GA+LW D+ AIPA S
Sbjct: 240 FSGDVFQAKARAEEAGNGNKIGYSIPKEGANLWFDMLAIPADS 282
>gi|126173349|ref|YP_001049498.1| extracellular solute-binding protein [Shewanella baltica OS155]
gi|386340106|ref|YP_006036472.1| extracellular solute-binding protein [Shewanella baltica OS117]
gi|418023188|ref|ZP_12662173.1| extracellular solute-binding protein family 1 [Shewanella baltica
OS625]
gi|125996554|gb|ABN60629.1| extracellular solute-binding protein, family 1 [Shewanella baltica
OS155]
gi|334862507|gb|AEH12978.1| extracellular solute-binding protein family 1 [Shewanella baltica
OS117]
gi|353537071|gb|EHC06628.1| extracellular solute-binding protein family 1 [Shewanella baltica
OS625]
Length = 366
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 74/163 (45%), Gaps = 28/163 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYK--KSKFQNHNLAPIEDWKDPWWPELAGRIS-----MVNS 280
DP G +A PY WGT IGY K K AP + + P+ A +IS M++S
Sbjct: 121 DP-GNQYAVPYLWGTNGIGYNIDKVKAAVGEDAPFNSMELIFNPKYAEKISKCGFAMLDS 179
Query: 281 -----PREVIVAG-----GKIAVQQNLALLANQVR----LFDSTHYLKAFGIGDVWVAVG 326
P+ +I G + + L ++R F S+ Y+ GD+ VA G
Sbjct: 180 ADDMVPQALIYLGLDPNSSNPSDYEKAGELLEKIRPYVTYFHSSRYISDLANGDICVAFG 239
Query: 327 WSSDVLPAVKRM------SNVAVVVPKSGASLWADLWAIPAAS 363
+S DV A R + + +PK GA+LW D+ AIPA S
Sbjct: 240 FSGDVFQAKARAEEAGNGNKIGYSIPKEGANLWFDMLAIPADS 282
>gi|428226280|ref|YP_007110377.1| extracellular solute-binding protein [Geitlerinema sp. PCC 7407]
gi|427986181|gb|AFY67325.1| extracellular solute-binding protein family 1 [Geitlerinema sp. PCC
7407]
Length = 376
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 72/155 (46%), Gaps = 23/155 (14%)
Query: 228 DPR---GKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPW--WPELAGRISMVNSPR 282
DPR G + P WGT + Y + K Q P EDW+ W P L+ RI+++N R
Sbjct: 144 DPRYDPGNRHSVPMSWGTTGLVYNRRKLQT---VP-EDWRYLWDNQPMLSRRITLLNDMR 199
Query: 283 EVIVAGGKI--------------AVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWS 328
EV+ A ++ A + L L + F S + GD+ +A+ +S
Sbjct: 200 EVMGATLRMLGYSYNAEDPAQLEAAYEELVKLKPAIASFTSDAWRSQIITGDLLIAMSYS 259
Query: 329 SDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAAS 363
SD + ++ ++P+SG+SLW D IP ++
Sbjct: 260 SDAQLVTEENPDLEYLIPQSGSSLWVDTMVIPKSA 294
>gi|241889938|ref|ZP_04777236.1| spermidine/putrescine-binding periplasmic protein PotD [Gemella
haemolysans ATCC 10379]
gi|241863560|gb|EER67944.1| spermidine/putrescine-binding periplasmic protein PotD [Gemella
haemolysans ATCC 10379]
Length = 359
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 81/197 (41%), Gaps = 30/197 (15%)
Query: 227 IDPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVI- 285
DP+ + ++ PY WGT+ I Y K+K E W D W L I +++ RE++
Sbjct: 125 FDPKNE-YSIPYFWGTLGILYDKTKVPED--LKFEKWNDLWDARLENNILLIDGAREMMG 181
Query: 286 ----VAGGKI----AVQQNLA-----LLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVL 332
G + V NLA LL ++ +S + WV+V +S D
Sbjct: 182 IALQSEGNSVNDTNEVNLNLAEKKLELLHPNIKAINSDEKKMLMINNEAWVSVVFSGDAK 241
Query: 333 PAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGQVRGPSPLIHQWIEFCLQTA 392
++ N+ +PK G +LW D IP S+ E +++I F L+
Sbjct: 242 SIMEENENMVYALPKEGTNLWFDNIVIPKTSKNEEAA------------YKFINFMLKPE 289
Query: 393 RALPFKQEVIPGASPSA 409
A E I A+P+
Sbjct: 290 NAAK-NSEFIGYATPNG 305
>gi|319897986|ref|YP_004136183.1| spermidine/putrescine-binding periplasmic protein 2 [Haemophilus
influenzae F3031]
gi|317433492|emb|CBY81875.1| spermidine/putrescine-binding periplasmic protein 2 precursor
[Haemophilus influenzae F3031]
Length = 350
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 113/287 (39%), Gaps = 59/287 (20%)
Query: 138 LRVVSLQNSVPQSWVKDFMRSQG---------------KRLKFQMNLCASIDGIVNNLST 182
L V + + VP V F + G +LK N +S D +V S
Sbjct: 30 LYVYNWTDYVPSDLVAQFSKETGIEVIYSTFESNEEMYAKLKLTQNTGSSYD-LVFPSSY 88
Query: 183 PFNKLSFAIKKRFIEPIAEAEDQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGT 242
NK+ IK++ ++PI DQ + K L E DP K ++ PY +G
Sbjct: 89 YVNKM---IKEKMLQPI----DQSKLTNIHQIPKHLLNK----EFDPENK-YSLPYVYGL 136
Query: 243 MAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREV----IVAGGK-------- 290
I + + I W D W PE G++ M + REV ++ GK
Sbjct: 137 TGIEVNADEI---DPKTITSWADLWKPEFKGKVLMTSDAREVFHVALLLDGKSPNTTNEE 193
Query: 291 ---IAVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPK 347
A ++ LL N V F+S + G+V + + W+ A K ++ V PK
Sbjct: 194 DIKTAYERLEKLLPN-VATFNSDSPEVPYVQGEVAIGMIWNGSAYLAQKENQSLQFVYPK 252
Query: 348 SGASLWADLWAIPAASRLETKQIGGQVRGPSPLIHQWIEFCLQTARA 394
GA W D +AIP ++ V G H++I+F L+ A
Sbjct: 253 EGAIFWMDNYAIPTTAK--------NVEGA----HKFIDFLLRPENA 287
>gi|304415318|ref|ZP_07396003.1| periplasmic-binding component of putrescine ABC transporter
[Candidatus Regiella insecticola LSR1]
gi|304282836|gb|EFL91314.1| periplasmic-binding component of putrescine ABC transporter
[Candidatus Regiella insecticola LSR1]
Length = 379
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 71/159 (44%), Gaps = 28/159 (17%)
Query: 234 WAAPYRWGTMAIGYKKSKFQNH--NLAPIEDWKDPWWPELAGR-----ISMVNSPREVIV 286
+A PY W T IGY K + AP W E + +S +++P E+
Sbjct: 138 FAIPYLWNTTVIGYNVEKIKEALGEDAPTNSWDLVLKAENLAKLKNCGVSFLDAPSEIFA 197
Query: 287 ---------AGGKIA------VQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDV 331
A ++A + L L +R F S+ Y+ GD+ VAVGW+ D+
Sbjct: 198 TVLHYLGKDANSQLASDYTGSATELLLTLRPNIRYFHSSKYINDLANGDICVAVGWNGDI 257
Query: 332 LPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
+ A R+ N+A +PK GA + D++A+PA ++
Sbjct: 258 VQAANRIKEANNGVNIAYSIPKEGALVTFDVFAMPADAK 296
>gi|28872418|ref|NP_795037.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas syringae pv. tomato str. DC3000]
gi|28855673|gb|AAO58732.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas syringae pv. tomato str. DC3000]
Length = 374
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 92/219 (42%), Gaps = 46/219 (21%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN-HNLAPIEDWKDPWWPELAGRIS---------- 276
DP G +A PY WGT IGY K + + I+ W + PE ++S
Sbjct: 120 DP-GNQYAVPYLWGTNGIGYNVDKVKAVLGVDKIDSWSVLFEPENIKKLSSCGVAFLDSA 178
Query: 277 ------MVN----SPREVIVAGGKIAVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVG 326
M+N P A K A + L + V F S+ Y+ GD+ VA G
Sbjct: 179 DEMLPAMLNYLGLDPNSTKEADYKKA-EAKLMAIRPYVTYFHSSKYITDLANGDICVAAG 237
Query: 327 WSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIPAASR------------LETK 368
+S DV A R +A PK G +LW D+ AIPA S+ L+ K
Sbjct: 238 FSGDVFQAKARAEEAGKGVKLAYSTPKEGGNLWFDMLAIPADSKNVKAASAFINYMLDPK 297
Query: 369 ---QIGGQV--RGPSPLIHQWIEFCLQTARALPFKQEVI 402
Q+ +V P+P +++E ++T A+ QEV+
Sbjct: 298 VIAQVSDEVGYANPNPASGEFMEQKIRTDAAVYPSQEVL 336
>gi|424923175|ref|ZP_18346536.1| Spermidine/putrescine-binding periplasmic protein [Pseudomonas
fluorescens R124]
gi|404304335|gb|EJZ58297.1| Spermidine/putrescine-binding periplasmic protein [Pseudomonas
fluorescens R124]
Length = 363
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 75/160 (46%), Gaps = 28/160 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP G +A PY WGT+ IGY + K + P++ W + P+ + ++ +++
Sbjct: 118 DP-GNQYAVPYMWGTVGIGYNEEKVRAVLGKDVPLDSWSMVFDPQNLAKLKNCGVAFLDA 176
Query: 281 PREVI-VAGGKIAVQQN-------------LALLANQVRLFDSTHYLKAFGIGDVWVAVG 326
P ++I A + + N L L V F+S+ Y GD+ VA+G
Sbjct: 177 PVKIIPQALLYLGLDPNSVKPDDYKQASKLLMTLRPSVTYFNSSKYTSDLANGDICVAIG 236
Query: 327 WSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIP 360
+S DV+ A R ++ ++PK G +LW D+ AIP
Sbjct: 237 YSGDVMQAQTRAREAGKNIDIRYLIPKEGVNLWFDMLAIP 276
>gi|367471729|ref|ZP_09471334.1| putrescine ABC transporter, periplasmic binding protein
[Bradyrhizobium sp. ORS 285]
gi|365276048|emb|CCD83802.1| putrescine ABC transporter, periplasmic binding protein
[Bradyrhizobium sp. ORS 285]
Length = 368
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 85/198 (42%), Gaps = 34/198 (17%)
Query: 191 IKKRFIEPIAEAEDQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIGYKKS 250
IK + +P+ D+ L++ W V + DP G +AA Y WGT IGY
Sbjct: 92 IKAKIFQPL----DKSKLPNLANAWPVV--TERLAIYDP-GNQFAANYMWGTTGIGYNVK 144
Query: 251 KFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNSPREVIVAG-GKIAVQQN------ 296
+ A I+ W + PE + + M++S ++ A + + N
Sbjct: 145 TIEKIFGAGARIDSWDMVFKPENLAKFKDCGVHMLDSADDIFPAALNYLGLDPNSTKQAD 204
Query: 297 -------LALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAV 343
+ +A+ VR F S+ YL A G++ + VGWS D++ A R +
Sbjct: 205 LEKAADVVGKVASSVRKFHSSEYLSALATGEICLVVGWSGDIMQARSRAEEAKNGIEIGY 264
Query: 344 VVPKSGASLWADLWAIPA 361
+PK GA ++ D AIPA
Sbjct: 265 AIPKEGAQMFFDNLAIPA 282
>gi|296103163|ref|YP_003613309.1| putrescine transporter periplasmic-binding component [Enterobacter
cloacae subsp. cloacae ATCC 13047]
gi|295057622|gb|ADF62360.1| putrescine transporter periplasmic-binding component [Enterobacter
cloacae subsp. cloacae ATCC 13047]
Length = 370
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 86/208 (41%), Gaps = 35/208 (16%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAP---IEDWKDPWWPELAGR-----ISMVN 279
DP K +A PY W T IGY K + L P ++ W PE + +S ++
Sbjct: 124 DPENK-YAMPYLWATTGIGYNVDKVKAA-LGPDVKLDSWDVVLKPENLAKLKSCGVSFLD 181
Query: 280 SPREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVA 324
+P E+ A +L L L +R F S+ Y+ GD+ VA
Sbjct: 182 APEEIFATVLNYLGKDPNSNKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVA 241
Query: 325 VGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIP--AASRLETKQIGGQVRG 376
+GW+ DV A R NV+ +PK GA + D++A+P A ++ E Q +
Sbjct: 242 IGWAGDVWQAANRAKEAKNGVNVSYFIPKEGALAFFDVFAMPADAKNKDEAYQFLNYLMR 301
Query: 377 PSPLIH--QWIEFCLQTARALPFKQEVI 402
P + H + + +LP E I
Sbjct: 302 PEVIAHISDHVYYANGNKASLPLISEEI 329
>gi|383764711|ref|YP_005443693.1| spermidine/putrescine ABC transporter substrate binding protein
[Caldilinea aerophila DSM 14535 = NBRC 104270]
gi|381384979|dbj|BAM01796.1| spermidine/putrescine ABC transporter substrate binding protein
[Caldilinea aerophila DSM 14535 = NBRC 104270]
Length = 380
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 70/150 (46%), Gaps = 21/150 (14%)
Query: 226 EIDPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPI-EDWKDPWWPELAGRISMVNSPREV 284
+ DP G I++ PY+ GT AI + PI + + D W P AGR+ M++ R +
Sbjct: 145 DFDP-GNIYSIPYQAGTDAIIVNTAVVD-----PIPQSFADLWNPAYAGRLVMIDDSRAI 198
Query: 285 IVA-----GGKIAVQQ---------NLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSD 330
I A G + LA LA ++LFDS A GDV + + W+ +
Sbjct: 199 IGATLLALGYDVNTTNPAELEEAKVKLAELARGIKLFDSDSPKTALIAGDVDLGIVWTGE 258
Query: 331 VLPAVKRMSNVAVVVPKSGASLWADLWAIP 360
+ A + + + + P GA LW D +AIP
Sbjct: 259 AVIAKREVPSFEYIYPTEGAILWQDNYAIP 288
>gi|365900788|ref|ZP_09438649.1| putrescine ABC transporter, periplasmic binding protein
[Bradyrhizobium sp. STM 3843]
gi|365418488|emb|CCE11191.1| putrescine ABC transporter, periplasmic binding protein
[Bradyrhizobium sp. STM 3843]
Length = 368
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 76/165 (46%), Gaps = 30/165 (18%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAP---IEDWKDPWWPELAGR-----ISMVN 279
DP G ++AA Y WGT IGY Q L P I+ W + PE + I +V+
Sbjct: 123 DP-GNLYAANYMWGTTGIGYNVKTVQKI-LGPDAKIDSWDIVFKPENLSKFKDCGIHVVD 180
Query: 280 SPREVIVAG-GKIAVQQN-------------LALLANQVRLFDSTHYLKAFGIGDVWVAV 325
+ +V A + + N ++ +A +R F S+ YL A G++ + V
Sbjct: 181 AADDVFPAALNYLKLNPNSTNQADLEKAADLISKIAPYIRKFHSSEYLSALATGEICLVV 240
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
G+S DV+ A R + + +PK GA L+ D AIPA ++
Sbjct: 241 GYSGDVMQARSRAAEANNGIEIGYTIPKEGAQLFFDNLAIPADAQ 285
>gi|398848447|ref|ZP_10605262.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM84]
gi|398248364|gb|EJN33781.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM84]
Length = 364
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 74/163 (45%), Gaps = 27/163 (16%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQNH-NLAPIEDWKDPWWPELAGRIS-----MVNSP 281
DP G +A PY WGT IGY K + + I+ W + PE ++S ++S
Sbjct: 120 DP-GNQYAVPYLWGTNGIGYNVDKVKAALGVDTIDSWAVLFEPENMKKLSKCGVAFLDSA 178
Query: 282 REVIVA------------GGKIAVQQNLALLANQ--VRLFDSTHYLKAFGIGDVWVAVGW 327
E++ A K + LLA + V F S+ Y+ GD+ VA G+
Sbjct: 179 DEMLPAVLNYMGLNPNSTDAKDYEKAEKKLLAVRPYVTYFHSSKYITDLANGDICVAAGF 238
Query: 328 SSDVLPA------VKRMSNVAVVVPKSGASLWADLWAIPAASR 364
S DV A K+ N+A +PK G +LW D+ AIP ++
Sbjct: 239 SGDVFQAKARAEEAKKGVNLAYAIPKEGGNLWFDVLAIPKDAK 281
>gi|163853417|ref|YP_001641460.1| extracellular solute-binding protein [Methylobacterium extorquens
PA1]
gi|163665022|gb|ABY32389.1| extracellular solute-binding protein family 1 [Methylobacterium
extorquens PA1]
Length = 367
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 70/160 (43%), Gaps = 28/160 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQNH--NLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP G +A Y WGT IG S + AP+ W P + + +++S
Sbjct: 122 DP-GNAFAVDYMWGTTGIGVNVSAVRERLGANAPLNSWSLVLNPGSIAKLKDCGVMLLDS 180
Query: 281 PREVI-----VAGGK---------IAVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVG 326
P ++I G K AV L + VR F S+ Y+ GDV +AVG
Sbjct: 181 PEDLIPSILPFYGFKSDSKRWDDITAVTDALYKVRGAVRKFHSSEYVNGLANGDVCLAVG 240
Query: 327 WSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIP 360
+S DV+ A KR +A +PK GA +W D +AIP
Sbjct: 241 YSGDVMQAKKRAEESKNGIEIAYFIPKEGALMWFDAFAIP 280
>gi|407693810|ref|YP_006818599.1| spermidine/putrescine-binding periplasmic protein (SPBP)
[Actinobacillus suis H91-0380]
gi|407389867|gb|AFU20360.1| spermidine/putrescine-binding periplasmic protein (SPBP)
[Actinobacillus suis H91-0380]
Length = 349
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 81/190 (42%), Gaps = 34/190 (17%)
Query: 227 IDPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREV-- 284
DP K ++ PY +G IG Q+ + + I W D W E G++ M+N PREV
Sbjct: 120 FDPENK-YSLPYVYGLTGIGVNS---QDFDPSTISSWGDLWRDEYKGKLLMMNDPREVFH 175
Query: 285 --IVAGGKI----------AVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVL 332
++ GK + Q L L V +F+S + G+V V + WS
Sbjct: 176 IALLLDGKSPNSENEQEIQSAYQRLQKLVPNVLVFNSDSPEMPYLQGEVSVGMQWSGSAH 235
Query: 333 PAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGQVRGPSPLIHQWIEFCLQTA 392
A ++ V PK GA +W D + IP G V + H++I+F L+
Sbjct: 236 RAKSENPDLKFVFPKEGAVIWMDNYVIPK----------GAVNKEAA--HKFIDFLLRPE 283
Query: 393 RALPFKQEVI 402
A +EVI
Sbjct: 284 SA----KEVI 289
>gi|254412638|ref|ZP_05026411.1| Bacterial extracellular solute-binding protein, putative
[Coleofasciculus chthonoplastes PCC 7420]
gi|196180373|gb|EDX75364.1| Bacterial extracellular solute-binding protein, putative
[Coleofasciculus chthonoplastes PCC 7420]
Length = 371
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 85/197 (43%), Gaps = 34/197 (17%)
Query: 210 RLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPW-- 267
R+ ++++ R A + DP G + P WGT + Y + Q P EDW W
Sbjct: 126 RIEGMYRLFPRFQQA-DYDP-GNRHSVPVSWGTTGLVYNTQQVQ----PPPEDWDYLWVY 179
Query: 268 WPELAGRISMVNSPREVIVAGGKI--------------AVQQNLALLANQVRLFDSTHYL 313
+LA R+++VN REV+ A K A Q L L + F S +
Sbjct: 180 QQQLAKRMTLVNDVREVMGAALKKLGYSYNSTNVEHIQAAYQALMDLKPAIASFTSDAWR 239
Query: 314 KAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGQ 373
GD+ +A+ +SSD + ++ V+P+SG+SLW D AIP +
Sbjct: 240 PQILSGDLKIAMCYSSDATEIMPENEDLRYVLPESGSSLWIDTLAIP--------KTAPN 291
Query: 374 VRGPSPLIHQWIEFCLQ 390
V G + WI F LQ
Sbjct: 292 VEG----AYAWINFMLQ 304
>gi|17232535|ref|NP_489083.1| polyamine-binding protein of polyamine ABC transporter [Nostoc sp.
PCC 7120]
gi|17134181|dbj|BAB76742.1| polyamine-binding protein of polyamine ABC transporter [Nostoc sp.
PCC 7120]
Length = 360
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 82/179 (45%), Gaps = 33/179 (18%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPE--LAGRISMVNSPREVI 285
DP+ + ++ P+ WGT + Y + AP EDW+ W + L+ R++++N REVI
Sbjct: 132 DPKNR-YSIPFNWGTTGLIYNSEILKE---AP-EDWEYLWRNQKLLSKRMTLLNDVREVI 186
Query: 286 VAGGKI--------------AVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDV 331
A ++ + L+ L + FD+ + GD+ +A+ +S+D
Sbjct: 187 GAVLRMLGYSYNSQNEAQIKQAYEKLSTLKPAIAAFDTDAWRNQILAGDLALAMCYSADA 246
Query: 332 LPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGQVRGPSPLIHQWIEFCLQ 390
+K + V+P+SG+SLW D IP ++ + G + WI F LQ
Sbjct: 247 TKVIKENPKLKYVIPRSGSSLWTDTIVIPKSA----PNLDGA--------YAWINFILQ 293
>gi|87120793|ref|ZP_01076686.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Marinomonas sp. MED121]
gi|86164021|gb|EAQ65293.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Marinomonas sp. MED121]
Length = 372
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 72/167 (43%), Gaps = 31/167 (18%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP K + PY WGT IGY AP++ W + PE + ++ ++S
Sbjct: 124 DPDNK-YGVPYLWGTTGIGYNPEMVAKALGEDAPVDSWDLIFKPEYMEKLANCGVTYLDS 182
Query: 281 PREVIV-----AGGKIA------------VQQNLALLANQVRLFDSTHYLKAFGIGDVWV 323
P E++ G I + L ++ F S+ Y+ GD V
Sbjct: 183 PDEMVTIALHYTGQDIGKSKRSDFKPTSPAGKALKGARPYIKQFHSSQYVNDLANGDTCV 242
Query: 324 AVGWSSDVLPAVKRM----SNVAVV--VPKSGASLWADLWAIPAASR 364
AVG+S DV A R + V VV +PK G+ +W D+ AIPA ++
Sbjct: 243 AVGFSGDVFQAAARAEEADNGVEVVYSIPKEGSEIWFDMLAIPADAK 289
>gi|422642389|ref|ZP_16705807.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas syringae Cit 7]
gi|440745316|ref|ZP_20924611.1| spermidine/putrescine ABC transporter substrate-binding protein
[Pseudomonas syringae BRIP39023]
gi|330954771|gb|EGH55031.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas syringae Cit 7]
gi|440372683|gb|ELQ09469.1| spermidine/putrescine ABC transporter substrate-binding protein
[Pseudomonas syringae BRIP39023]
Length = 364
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 70/163 (42%), Gaps = 27/163 (16%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN-HNLAPIEDWKDPWWPELAGRIS-----MVNSP 281
DP G +A PY WGT IGY K + + I+ W + PE ++S ++S
Sbjct: 120 DP-GNQYAVPYLWGTNGIGYNVEKVKAVLGVDKIDSWAVLFEPENIKKLSSCGVAFLDSA 178
Query: 282 REVIVA--------------GGKIAVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGW 327
E++ A + L + V F S+ Y+ GD+ VA G+
Sbjct: 179 DEMLPAVLNYMGLDPNSTKEADYKKAEAKLLAIRPYVTYFHSSKYITDLANGDICVAAGF 238
Query: 328 SSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIPAASR 364
S DV A R +A +PK G +LW D+ AIPA S+
Sbjct: 239 SGDVFQAKSRAEEAGKGVKIAYSIPKEGGNLWFDMLAIPADSK 281
>gi|323142870|ref|ZP_08077582.1| putative putrescine-binding periplasmic protein [Succinatimonas
hippei YIT 12066]
gi|322417412|gb|EFY08034.1| putative putrescine-binding periplasmic protein [Succinatimonas
hippei YIT 12066]
Length = 377
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 82/205 (40%), Gaps = 46/205 (22%)
Query: 227 IDPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGR----------IS 276
IDP +A PY ++ I Y K P D+K W L + I+
Sbjct: 119 IDPNND-YAYPYTEISLGIAYNDKKIA-EIFGP--DFKVDSWDFLFKKENSDKLKQCGIA 174
Query: 277 MVNSPREVIVAG----GKI----------AVQQNLALLANQVRLFDSTHYLKAFGIGDVW 322
+++SP EVI A GK ++ L LA+ VR F S+ Y+ G++
Sbjct: 175 VLDSPIEVISAAMHYLGKDPNSEKASDYEEAEKLLTALASNVRYFHSSRYINELASGEIC 234
Query: 323 VAVGWSSDVLPAVKRM------SNVAVVVPKSGASLWADLWAIPAASRLETKQIGGQVRG 376
A+G+S D+L A KR + V PK G+ LW D W IPA + +G
Sbjct: 235 AAIGYSGDILQADKRAIQANRDYRIKYVFPKEGSLLWFDCWTIPAGAE--------NYKG 286
Query: 377 PSPLIHQWIEFCLQTARALPFKQEV 401
H W + L A E+
Sbjct: 287 A----HAWFNYLLDPQVAKSVSNEI 307
>gi|389684687|ref|ZP_10176014.1| putrescine-binding periplasmic protein, PotF family [Pseudomonas
chlororaphis O6]
gi|388551424|gb|EIM14690.1| putrescine-binding periplasmic protein, PotF family [Pseudomonas
chlororaphis O6]
Length = 366
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 117/262 (44%), Gaps = 42/262 (16%)
Query: 138 LRVVSLQNSVPQSWVKDFMRSQGKRLK---FQMNLCASIDGIVNN----LSTPFNK-LSF 189
LRV + + + S KDF ++ G ++ F N + N L P N+ L
Sbjct: 29 LRVYNWADYILPSVPKDFAKNSGIKVTWDTFDTNESLEAKLLTGNSGYDLVVPSNQFLDT 88
Query: 190 AIKKRFIEPIAEAEDQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIGYKK 249
IK + + +++ +W H+ V L+ D+ DP G + PY +GT+ IG+
Sbjct: 89 QIKAGVFQKLDKSKLPNW----QHQDPVLLKLLDSN--DP-GNQYGVPYMYGTVLIGFNP 141
Query: 250 SKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNSPREVI-VAGGKIAVQQN----- 296
+K + + AP++ W + PE + ++M++SP E++ +A + + N
Sbjct: 142 AKVKAALGDKAPVDSWDLVFKPENMEKLKSCGVAMLDSPTEILPLALHYLGLDPNSQNPQ 201
Query: 297 --------LALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLP---AVKRMSNVAVV- 344
+ + V F+S Y+ GD+ VA+G+S K N VV
Sbjct: 202 DYEKAKELMLKIRPYVTYFNSAKYMTDIANGDICVAIGYSGSFYQFGNRAKEAGNGVVVD 261
Query: 345 --VPKSGASLWADLWAIPAASR 364
+PK GA +W D +AIP +++
Sbjct: 262 WRLPKEGAPIWFDTFAIPKSAK 283
>gi|157960774|ref|YP_001500808.1| extracellular solute-binding protein [Shewanella pealeana ATCC
700345]
gi|157845774|gb|ABV86273.1| extracellular solute-binding protein family 1 [Shewanella pealeana
ATCC 700345]
Length = 366
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 76/161 (47%), Gaps = 28/161 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGRIS-----MVNS 280
DP G ++ PY WGT IGY K + AP++ + + P+ A ++S +++S
Sbjct: 121 DP-GNQYSVPYLWGTNGIGYNVEKVKAVLGEDAPVDSLELIFNPKYAEKVSQCGLSLLDS 179
Query: 281 PREVI-VAGGKIAVQQN-------------LALLANQVRLFDSTHYLKAFGIGDVWVAVG 326
E+I +A + + N LA + + F S+ Y+ GD+ VA G
Sbjct: 180 ADEMIPMALIYLGLDPNSTKADDFKKAGEVLAKVRPYITYFHSSRYITDLANGDICVAFG 239
Query: 327 WSSDVLPAVKRM------SNVAVVVPKSGASLWADLWAIPA 361
+S D+ A R + + +PK G++LW D+ AIPA
Sbjct: 240 YSGDIFQAADRADEAENGNTIEYSIPKEGSNLWFDMLAIPA 280
>gi|322515385|ref|ZP_08068379.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Actinobacillus ureae ATCC
25976]
gi|322118612|gb|EFX90840.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Actinobacillus ureae ATCC
25976]
Length = 349
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 80/190 (42%), Gaps = 34/190 (17%)
Query: 227 IDPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREV-- 284
DP K ++ PY +G IG Q+ + + I W D W E G++ M+N PREV
Sbjct: 120 FDPENK-YSLPYVYGLTGIGVNS---QDFDPSTISSWGDLWRDEYKGKLLMMNDPREVFH 175
Query: 285 --IVAGGKI----------AVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVL 332
++ GK + Q L L V +F+S + G+V V + WS
Sbjct: 176 IALLLDGKSPNSENEQEIQSAYQRLQKLVPNVLVFNSDSPEMPYLQGEVSVGMQWSGSAH 235
Query: 333 PAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGQVRGPSPLIHQWIEFCLQTA 392
A ++ V PK GA +W D + IP G V + H++I+F L
Sbjct: 236 RAKSENPDLKFVFPKEGAVIWMDNYVIPK----------GAVNKEAA--HKFIDFLLHPE 283
Query: 393 RALPFKQEVI 402
A +EVI
Sbjct: 284 SA----KEVI 289
>gi|398917403|ref|ZP_10658140.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM49]
gi|398172997|gb|EJM60845.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM49]
Length = 365
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 95/221 (42%), Gaps = 35/221 (15%)
Query: 235 AAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNSPREVIVA 287
A PY WG++ IG+ K + AP W + PE A + IS ++SP E++
Sbjct: 126 AIPYMWGSIGIGFNPQKVREVLGANAPTNSWDLLFKPENAEKLKACGISFLDSPTEMLPT 185
Query: 288 G-----------GKIAVQQNLALLAN---QVRLFDSTHYLKAFGIGDVWVAVGWSSDVLP 333
K + + AL V F S+ Y+ G++ VAVG+S DVL
Sbjct: 186 ALHYLGYPVNDQDKQHIAEAEALFMKIRPNVAYFHSSKYISDLANGNICVAVGYSGDVLQ 245
Query: 334 AVKRMSN------VAVVVPKSGASLWADLWAIP--AASRLETKQIGGQVRGPSPL--IHQ 383
A R + +PK GA+ + D+ AIP AA+ + P + I
Sbjct: 246 AKARAQEAGDKVKIDYSIPKEGAASFYDMLAIPRDAANVENAYLFMNFLMRPDVIADITN 305
Query: 384 WIEFCLQTARALPFKQEVI---PGASPS-ALESTLVKLPEE 420
I + A A P E I PG+ PS A+ +TL +P++
Sbjct: 306 NIGYSNANAAATPLVDEAIRNDPGSYPSEAVMATLYAVPDQ 346
>gi|381405138|ref|ZP_09929822.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Pantoea sp. Sc1]
gi|380738337|gb|EIB99400.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Pantoea sp. Sc1]
Length = 369
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 78/191 (40%), Gaps = 41/191 (21%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP G +A PY WGT IGY K + AP+ W PE + +S +++
Sbjct: 123 DP-GNKYAIPYLWGTTGIGYNVDKVKAALGTDAPLNSWDLVMKPENLEKLKSCGVSFLDA 181
Query: 281 PREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAV 325
P E+ A +L L L +R F S+ Y+ G++ VA+
Sbjct: 182 PEEIFATVLNYLGKDPNSSDAKDYSGAATDLLLKLRPNIRYFHSSQYINDLANGNICVAI 241
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASRLETKQIGGQVRGPSP 379
GWS D+L A R ++ VPK GA + D+ AIP + K I G
Sbjct: 242 GWSGDILQAKNRADAAKNGVHLGYSVPKEGALAFFDMMAIPK----DAKNIDGA------ 291
Query: 380 LIHQWIEFCLQ 390
+ W+ + +
Sbjct: 292 --YAWLNYIMD 300
>gi|85058903|ref|YP_454605.1| spermidine/putrescine ABC transporter substrate-binding protein
[Sodalis glossinidius str. 'morsitans']
gi|84779423|dbj|BAE74200.1| putrescine ABC transporter periplasmic component [Sodalis
glossinidius str. 'morsitans']
Length = 369
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 70/165 (42%), Gaps = 29/165 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP K +A PY W T +IGY K + AP+ W PE + +S +++
Sbjct: 123 DPDNK-YAVPYMWATTSIGYNVEKVKAVLGKDAPVNSWDLVLKPENLAKLKSCGVSFLDA 181
Query: 281 PREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAV 325
P E+ A +L L L + F S+ Y+ GD+ V +
Sbjct: 182 PFEIYATVLNYLGKDPNSDNAANYTGPATDLLLKLRPSILYFHSSQYINDLANGDICVTI 241
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
GW DV+ A R N+A +PK GA + D+ AIPA ++
Sbjct: 242 GWVGDVMQAANRAKEAKNGVNIAYSIPKEGALAFFDVLAIPADAK 286
>gi|16799874|ref|NP_470142.1| hypothetical protein lin0800 [Listeria innocua Clip11262]
gi|16413251|emb|CAC96032.1| lin0800 [Listeria innocua Clip11262]
Length = 357
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 91/203 (44%), Gaps = 34/203 (16%)
Query: 234 WAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVIVAG----G 289
++ PY WGT+ I Y K F + N + W + PEL +I +++ REV+ G G
Sbjct: 132 YSMPYFWGTLGIIYNKEMFPDKNF---DTWNALFDPELKNQILLIDGAREVMGLGLNSLG 188
Query: 290 KIAVQQNLA-LLANQVRLFDSTHYLKAFGIGD----------VWVAVGWSSDVLPAVKRM 338
N + L A + +L T +KA +GD VAV +S + +
Sbjct: 189 YSLNDTNKSHLQAARDKLETMTPNVKAI-VGDEIKLLMADNEAGVAVTFSGEAAEMLSEN 247
Query: 339 SNVAVVVPKSGASLWADLWAIPAASRLETKQIGGQVRGPSPLIHQWIEFCLQTARALPFK 398
++ V+PK G++LW D IP + K + G H++I F L+ A
Sbjct: 248 EDLEYVIPKDGSNLWFDNMVIPKTA----KNVDGA--------HKFINFMLKPENA-AIN 294
Query: 399 QEVIPGASPSALESTLVKLPEEL 421
E + A+P+ E + LP+E+
Sbjct: 295 AEYVGYATPN--EKAVKLLPKEI 315
>gi|422658420|ref|ZP_16720854.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas syringae pv. lachrymans str. M302278]
gi|331017047|gb|EGH97103.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas syringae pv. lachrymans str. M302278]
Length = 364
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 92/219 (42%), Gaps = 46/219 (21%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN-HNLAPIEDWKDPWWPELAGRIS---------- 276
DP G +A PY WGT IGY K + + I+ W + PE ++S
Sbjct: 120 DP-GNQYAVPYLWGTNGIGYNVDKVKAVLGVDKIDSWSVLFEPENIKKLSSCGVAFLDSA 178
Query: 277 ------MVN----SPREVIVAGGKIAVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVG 326
M+N P A K A + L + V F S+ Y+ GD+ VA G
Sbjct: 179 DEMLPAMLNYLGLDPNSTKEADYKKA-EAKLMAIRPYVTYFHSSKYITDLANGDICVAAG 237
Query: 327 WSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIPAASR------------LETK 368
+S DV A R +A PK G +LW D+ AIPA S+ L+ K
Sbjct: 238 FSGDVFQAKARAEEAGKGVKLAYSTPKEGGNLWFDMLAIPADSKNVKAASAFINYMLDPK 297
Query: 369 ---QIGGQV--RGPSPLIHQWIEFCLQTARALPFKQEVI 402
Q+ +V P+P +++E ++T A+ QEV+
Sbjct: 298 VIAQVSDEVGYANPNPASGEFMEQKIRTDAAVYPSQEVL 336
>gi|325291998|ref|YP_004277862.1| putrescine ABC transporter substrate-binding protein [Agrobacterium
sp. H13-3]
gi|418408087|ref|ZP_12981404.1| putrescine ABC transporter substrate-binding protein [Agrobacterium
tumefaciens 5A]
gi|325059851|gb|ADY63542.1| putrescine ABC transporter, substrate binding protein
[Agrobacterium sp. H13-3]
gi|358006073|gb|EHJ98398.1| putrescine ABC transporter substrate-binding protein [Agrobacterium
tumefaciens 5A]
Length = 365
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 72/163 (44%), Gaps = 27/163 (16%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQNH-NLAPIEDWKDPWWPELAGR-----ISMVNSP 281
DP G +A Y WGT IGY +K + P++ W + PE A + I+++++
Sbjct: 121 DP-GNEYAVNYMWGTTGIGYNVAKVKAALGDVPVDSWDILFKPENAEKLKSCGINILDAS 179
Query: 282 REVIVAG----GKIAVQQNLALLANQ----------VRLFDSTHYLKAFGIGDVWVAVGW 327
E GK + A L V+ F+S+ Y+ GD + +GW
Sbjct: 180 DETFAIAMNYLGKNPDSKETADLEAGGAVYSKIRPFVKTFNSSAYIDELANGDSCITIGW 239
Query: 328 SSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
S D+L A KR V V+PK G +W D AIPA ++
Sbjct: 240 SGDILQAKKRAEEAKNGVEVNYVIPKEGTYMWFDNLAIPADAK 282
>gi|398927515|ref|ZP_10662982.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM48]
gi|398169659|gb|EJM57635.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM48]
Length = 365
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 95/221 (42%), Gaps = 35/221 (15%)
Query: 235 AAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNSPREVIVA 287
A PY WG++ IG+ K + AP W + PE A + IS ++SP E++
Sbjct: 126 AIPYMWGSIGIGFNPQKVREVLGANAPTNSWDLLFKPENAEKLKACGISFLDSPTEMLPT 185
Query: 288 G-----------GKIAVQQNLALLAN---QVRLFDSTHYLKAFGIGDVWVAVGWSSDVLP 333
K + + AL V F S+ Y+ G++ VAVG+S DVL
Sbjct: 186 ALHYLGYPVNDQDKQHIAEAEALFMKIRPNVAYFHSSKYISDLANGNICVAVGYSGDVLQ 245
Query: 334 AVKRMSN------VAVVVPKSGASLWADLWAIP--AASRLETKQIGGQVRGPSPL--IHQ 383
A R + +PK GA+ + D+ AIP AA+ + P + I
Sbjct: 246 AKARAQEAGDKVKIDYSIPKEGAASFYDMLAIPRDAANVENAYLFMNFLMRPDVIADITN 305
Query: 384 WIEFCLQTARALPFKQEVI---PGASPS-ALESTLVKLPEE 420
I + A A P E I PG+ PS A+ +TL +P++
Sbjct: 306 NIGYSNANAAATPLVDEAIRNDPGSYPSEAVMATLYAVPDQ 346
>gi|429093187|ref|ZP_19155791.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Cronobacter dublinensis 1210]
gi|426741998|emb|CCJ81904.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Cronobacter dublinensis 1210]
Length = 281
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 71/165 (43%), Gaps = 29/165 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP K +A PY W T IGY K + AP+ W PE + +S +++
Sbjct: 35 DPDNK-YAMPYLWATTGIGYNVDKVKAALGKDAPVNSWDLVLKPENLEKLKSCGVSFLDA 93
Query: 281 PREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAV 325
P E+ A +L L L +R F S+ Y+ GD VA+
Sbjct: 94 PEEIFATVLNYLGKDPNSSKADDYSGAATDLLLKLRPNIRYFHSSQYINDLANGDTCVAI 153
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
GW+ DV A R N++ +PK GA + D++A+PA ++
Sbjct: 154 GWAGDVWQAANRAKEAKNGVNISYSIPKEGALAFFDVFAMPADAK 198
>gi|402312720|ref|ZP_10831644.1| ABC transporter, solute-binding protein [Lachnospiraceae bacterium
ICM7]
gi|400369178|gb|EJP22181.1| ABC transporter, solute-binding protein [Lachnospiraceae bacterium
ICM7]
Length = 363
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 70/161 (43%), Gaps = 25/161 (15%)
Query: 224 AGEIDPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPRE 283
A DP K +A PY WGT+ I Y S + I W D W P+ G I M +S R+
Sbjct: 126 AKSFDPENK-YAVPYTWGTVGILYNTSMVDDE----ITSWSDLWNPKYQGNILMQDSVRD 180
Query: 284 VIVAGGKI-----AVQQNLALLANQVRLFDSTHYLKAFGI---------GDVWVAVGWSS 329
+ G K+ L + +L + ++A+ I G+ + V +S
Sbjct: 181 AFMVGEKMLGYSMNTTDKAELEKVKEKLIEQKPLVQAYVIDQVRDKMIGGEAAIGVIYSG 240
Query: 330 DVLPAVKRMSN------VAVVVPKSGASLWADLWAIPAASR 364
++L ++N + V+PK G +LW D W IP ++
Sbjct: 241 EMLYVQNEVANSGEDFELKYVIPKEGTNLWIDAWVIPKNAK 281
>gi|423093076|ref|ZP_17080872.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas fluorescens Q2-87]
gi|397882270|gb|EJK98757.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas fluorescens Q2-87]
Length = 365
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 71/159 (44%), Gaps = 27/159 (16%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN-HNLAPIEDWKDPWWPELAGR-----ISMVNSP 281
DP G +A PY WGT IGY +K + + I+ W + PE + +S ++S
Sbjct: 121 DP-GNQYAVPYLWGTNGIGYNVAKIKAVLGVDKIDSWAMLFEPENIKKLSSCGVSFLDSG 179
Query: 282 REVIVAGGKI--------------AVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGW 327
E+I A + L + V F+S+ Y+ G++ VA G+
Sbjct: 180 DEMIPAMLNYLGLSPNSEDPEDYKKAEAQLLKIRPYVTYFNSSKYISDLANGEICVAAGF 239
Query: 328 SSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIP 360
S D+ A R S +A V+PK G +LW D+ AIP
Sbjct: 240 SGDIFQARARASEAGKGVEIAYVIPKEGGNLWFDMLAIP 278
>gi|407803625|ref|ZP_11150459.1| extracellular solute-binding protein [Alcanivorax sp. W11-5]
gi|407022469|gb|EKE34222.1| extracellular solute-binding protein [Alcanivorax sp. W11-5]
Length = 351
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 91/218 (41%), Gaps = 33/218 (15%)
Query: 227 IDPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVIV 286
DP + ++ PY WG+ + + + W D W P+ GR+ + N REV
Sbjct: 122 FDPENQ-YSVPYLWGSTGMAVNGAAVSTDG---VTKWADLWDPKYKGRVLLTNDVREVFH 177
Query: 287 AGGKI--------------AVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVL 332
G ++ A + L L VR F+S + G+ + + W+ + +
Sbjct: 178 IGLRVLGYSGNSTSEEEIAAAYEKLRELMPSVRAFNSDAPRMPYLEGEADIGLIWNGEAV 237
Query: 333 PAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGQVRGPSPLIHQWIEFCLQTA 392
A + + +A V P+ GA +W D + IP +R V H++I+F LQ
Sbjct: 238 MAQEELPELAYVYPEEGAVIWVDNFVIPKNAR--------NVEAA----HKFIDFVLQPE 285
Query: 393 RALPFKQEVIPGASPSALESTLVKLPEELLKGKPSVDT 430
A +E I A+P+ L LP E+ + + S T
Sbjct: 286 VAAQISEE-IGYATPNLPAREL--LPPEVRENRTSYPT 320
>gi|395495482|ref|ZP_10427061.1| putrescine ABC transporter substrate-binding periplasmic protein
[Pseudomonas sp. PAMC 25886]
Length = 364
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 71/159 (44%), Gaps = 27/159 (16%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN-HNLAPIEDWKDPWWPELAGR-----ISMVNSP 281
DP G +A PY WGT IGY K + + I+ W + PE + +S ++S
Sbjct: 120 DP-GNQYAVPYLWGTNGIGYNVDKVKEVLGVDKIDSWAVLFEPENMKKLASCGVSFMDSA 178
Query: 282 REVIVA--------------GGKIAVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGW 327
E++ A ++ L + V F S+ Y+ G++ VA G+
Sbjct: 179 DEMLPAVLNYMGLNPNSTNPEDYKKAEEKLLKVRPYVTYFHSSKYISDLANGNICVAAGF 238
Query: 328 SSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIP 360
S DV A R + N+A V+PK G +LW D+ AIP
Sbjct: 239 SGDVFQAKARAAEAGKGVNIAYVIPKEGGNLWFDVLAIP 277
>gi|242239712|ref|YP_002987893.1| putrescine ABC transporter periplasmic-binding protein [Dickeya
dadantii Ech703]
gi|242131769|gb|ACS86071.1| extracellular solute-binding protein family 1 [Dickeya dadantii
Ech703]
Length = 369
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 73/168 (43%), Gaps = 31/168 (18%)
Query: 226 EIDPRGKIWAAPYRWGTMAIGY--KKSKFQNHNLAPIEDWKDPWWPELAGR-----ISMV 278
E DP G +A PY W T IGY +K K P+ W PE + +S +
Sbjct: 121 EHDP-GHKYAVPYLWATTGIGYNVEKVKAALGKDVPVNSWDLVLKPENLEKLKSCGVSFL 179
Query: 279 NSPREVIVA----------------GGKIAVQQNLALLANQVRLFDSTHYLKAFGIGDVW 322
++P E+ K A L L + +R F S+ Y+ GD+
Sbjct: 180 DAPAEIYATVLNYLGKDPNSTKESDYSKDATDLLLKLRPS-IRYFHSSQYINDLANGDIC 238
Query: 323 VAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
VA+GW+ DV+ A R N++ +PK GA + D++AIP ++
Sbjct: 239 VAIGWAGDVMQAANRAKEAKNGVNISYAIPKEGALAFFDVFAIPKDAK 286
>gi|108805698|ref|YP_645635.1| extracellular solute-binding protein [Rubrobacter xylanophilus DSM
9941]
gi|108766941|gb|ABG05823.1| extracellular solute-binding protein, family 1 [Rubrobacter
xylanophilus DSM 9941]
Length = 363
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 68/154 (44%), Gaps = 27/154 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVI-- 285
DP + ++ PY+WGT I Y + + + ++ W W PE G+I+M+N RE I
Sbjct: 137 DPENR-YSVPYQWGTTGILYNRKE-----IGEVDSWDAMWNPEFKGKIAMLNDVRETIGA 190
Query: 286 ----------------VAGGKIAVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSS 329
+A + ++++ LL F ST A GD+ + +S
Sbjct: 191 ALMRLGYSINSTDPDELAEAEESLKEQKPLLRG---YFASTEVRPAVQNGDLLLGHVYSG 247
Query: 330 DVLPAVKRMSNVAVVVPKSGASLWADLWAIPAAS 363
D A+ ++ +PK GA+ W D AIP +
Sbjct: 248 DAFLAMVENEELSYAIPKPGATRWTDNMAIPVGA 281
>gi|422418309|ref|ZP_16495264.1| spermidine/putrescine-binding periplasmic protein 2 [Listeria
seeligeri FSL N1-067]
gi|422421436|ref|ZP_16498389.1| spermidine/putrescine-binding periplasmic protein 2 [Listeria
seeligeri FSL S4-171]
gi|313634214|gb|EFS00853.1| spermidine/putrescine-binding periplasmic protein 2 [Listeria
seeligeri FSL N1-067]
gi|313638842|gb|EFS03905.1| spermidine/putrescine-binding periplasmic protein 2 [Listeria
seeligeri FSL S4-171]
Length = 357
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 91/203 (44%), Gaps = 34/203 (16%)
Query: 234 WAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVIVAG----G 289
++ PY WGT+ I Y K F + N + W + P+L +I +++ REV+ G G
Sbjct: 132 YSMPYFWGTLGIIYNKEMFPDKNF---DTWDALFDPDLKNQILLIDGAREVMGLGLNSLG 188
Query: 290 KIAVQQNLA-LLANQVRLFDSTHYLKAFGIGD----------VWVAVGWSSDVLPAVKRM 338
N A L+ + +L T +KA +GD VAV +S + +
Sbjct: 189 YSLNDTNKAHLMEARDKLETMTPNVKAI-VGDEIKLLMADNEAGVAVTFSGEAAEMLSEN 247
Query: 339 SNVAVVVPKSGASLWADLWAIPAASRLETKQIGGQVRGPSPLIHQWIEFCLQTARALPFK 398
++ V+PK G++LW D IP + K + G H++I F L+ A
Sbjct: 248 EDLEYVIPKDGSNLWFDNMVIPKTA----KNVDGA--------HKFINFMLKPENA-AIN 294
Query: 399 QEVIPGASPSALESTLVKLPEEL 421
E + A+P+ E + LP+E+
Sbjct: 295 AEYVGYATPN--EKAVKLLPKEI 315
>gi|146341580|ref|YP_001206628.1| putrescine ABC transporter substrate-binding protein
[Bradyrhizobium sp. ORS 278]
gi|146194386|emb|CAL78411.1| putrescine ABC transporter, periplasmic binding protein
[Bradyrhizobium sp. ORS 278]
Length = 366
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 88/201 (43%), Gaps = 34/201 (16%)
Query: 191 IKKRFIEPIAEAEDQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIGYKKS 250
IK + +P+ +A+ L++ W V + DP G +AA Y WGT IGY
Sbjct: 90 IKAKIFQPLDKAK----LPNLANAWTVV--TARLATYDP-GNQFAANYMWGTTGIGYNVK 142
Query: 251 KFQNHNLAP--IEDWKDPWWPELAGR-----ISMVNSPREVIVAG-GKIAVQQN------ 296
+ A I+ W + PE R + M++S ++ A + + N
Sbjct: 143 AIEKILGAGVRIDSWDMVFKPENLARFKDCGVHMLDSADDIFPAALNYLGLDPNSTKQAD 202
Query: 297 -------LALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAV 343
+ +A VR F S+ YL A G++ + VGWS D++ A R +
Sbjct: 203 LEKAAEVVGKVAPFVRKFHSSEYLSALATGEICLVVGWSGDIMQARSRAEEAKNGIEIGY 262
Query: 344 VVPKSGASLWADLWAIPAASR 364
+PK GA ++ D +AIPA ++
Sbjct: 263 AIPKEGAQMFFDNFAIPADAQ 283
>gi|283784617|ref|YP_003364482.1| putrescine ABC transporter substrate-binding protein [Citrobacter
rodentium ICC168]
gi|282948071|emb|CBG87636.1| putrescine ABC transporter, substrate-binding protein [Citrobacter
rodentium ICC168]
Length = 370
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 72/165 (43%), Gaps = 29/165 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP K +A PY W T IGY K + AP++ W PE + +S +++
Sbjct: 124 DPDNK-FAMPYMWATTGIGYNVDKVKAVLGADAPVDSWDLILKPENLEKLKSCGVSFLDA 182
Query: 281 PREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAV 325
P EV A +L L L +R F S+ Y+ GD VA+
Sbjct: 183 PEEVFATVLNYLGKDPNSTDAKDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDTCVAI 242
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
GW+ DV A R N++ +PK GA + D++A+PA ++
Sbjct: 243 GWAGDVWQAANRAKEAKNGINISFSIPKEGAMAFFDVFAMPADAK 287
>gi|218532276|ref|YP_002423092.1| family 1 extracellular solute-binding protein [Methylobacterium
extorquens CM4]
gi|218524579|gb|ACK85164.1| extracellular solute-binding protein family 1 [Methylobacterium
extorquens CM4]
Length = 367
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 70/160 (43%), Gaps = 28/160 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQNH--NLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP G +A Y WGT IG S + AP+ W P + + +++S
Sbjct: 122 DP-GNTFAVDYMWGTTGIGVNVSAVRERLGANAPLNSWSLVLNPGSIAKLKDCGVMLLDS 180
Query: 281 PREVI-----VAGGK---------IAVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVG 326
P ++I G K AV L + VR F S+ Y+ GDV +AVG
Sbjct: 181 PEDLIPSILPFYGFKSDSKRWDDITAVTDALYKVRGAVRKFHSSEYVNGLANGDVCLAVG 240
Query: 327 WSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIP 360
+S DV+ A KR +A +PK GA +W D +A+P
Sbjct: 241 YSGDVMQAKKRAEESKNGIEIAYFIPKEGALMWFDAFAVP 280
>gi|399054172|ref|ZP_10742802.1| spermidine/putrescine-binding periplasmic protein [Brevibacillus
sp. CF112]
gi|433544690|ref|ZP_20501067.1| spermidine/putrescine ABC transporter substrate-binding protein
[Brevibacillus agri BAB-2500]
gi|398048070|gb|EJL40562.1| spermidine/putrescine-binding periplasmic protein [Brevibacillus
sp. CF112]
gi|432184038|gb|ELK41562.1| spermidine/putrescine ABC transporter substrate-binding protein
[Brevibacillus agri BAB-2500]
Length = 350
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 62/141 (43%), Gaps = 18/141 (12%)
Query: 238 YRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREV----IVAGG---- 289
Y WG I Y K + + W D W GR+ M+N PREV ++ G
Sbjct: 132 YTWGITGIAYNKKYVKETPTS----WSDLWNEAYKGRVIMLNDPREVMGMALIKNGFSNS 187
Query: 290 ---KIAVQQNLALLANQ---VRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAV 343
K ++++ A L V FD+ + + + W+ WS D + +V
Sbjct: 188 TTNKDELEKSFADLKKMLPGVMAFDTDNIKQKMIAEEAWIGTVWSGDAAIINGQNPDVEY 247
Query: 344 VVPKSGASLWADLWAIPAASR 364
V+PK GA++WAD AIP ++
Sbjct: 248 VIPKEGATIWADTLAIPKGAK 268
>gi|424909501|ref|ZP_18332878.1| spermidine/putrescine-binding periplasmic protein [Rhizobium
leguminosarum bv. viciae USDA 2370]
gi|392845532|gb|EJA98054.1| spermidine/putrescine-binding periplasmic protein [Rhizobium
leguminosarum bv. viciae USDA 2370]
Length = 365
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 73/168 (43%), Gaps = 37/168 (22%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQNH-NLAPIEDWKDPWWPELAGR-----ISMVNSP 281
DP G +A Y WGT IGY +K + P++ W + PE A + I+++++
Sbjct: 121 DP-GNEYAVNYMWGTTGIGYNVAKVKAALGDVPVDSWDILFKPENAEKLKSCGINILDAS 179
Query: 282 REVIV-------------------AGGKIAVQQNLALLANQVRLFDSTHYLKAFGIGDVW 322
E AGG + ++ + V+ F+S+ Y+ GD
Sbjct: 180 DETFAIAMNYLGKNPDSKETADLEAGGDVYMK-----IRPYVKTFNSSAYIDELANGDSC 234
Query: 323 VAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
+ +GWS D+L A R V V+PK G +W D AIPA ++
Sbjct: 235 ITIGWSGDILQAKSRAEEAKNGVEVNYVIPKEGTYMWFDNLAIPADAK 282
>gi|423694163|ref|ZP_17668683.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas fluorescens SS101]
gi|388000415|gb|EIK61744.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas fluorescens SS101]
Length = 364
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 70/159 (44%), Gaps = 27/159 (16%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKF-QNHNLAPIEDWKDPWWPELAGR-----ISMVNSP 281
DP G +A PY WGT IGY K Q + I+ W + PE + +S ++S
Sbjct: 120 DP-GNQYAVPYLWGTNGIGYNVDKVKQVLGVDKIDSWAVLFEPENMKKLATCGVSFMDSA 178
Query: 282 REVIVA--------------GGKIAVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGW 327
E++ A ++ L + V F S+ Y+ G++ VA G+
Sbjct: 179 DEMLPAVLNYMGLDPNSTNPADYKKAEEKLLKVRPYVTYFHSSKYISDLANGNICVAAGF 238
Query: 328 SSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIP 360
S DV A R + N+A +PK G +LW D+ AIP
Sbjct: 239 SGDVFQAKARAAEAGKGVNIAYTIPKEGGNLWFDVLAIP 277
>gi|422608005|ref|ZP_16679996.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas syringae pv. mori str. 301020]
gi|330891638|gb|EGH24299.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas syringae pv. mori str. 301020]
Length = 364
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 77/185 (41%), Gaps = 35/185 (18%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN-HNLAPIEDWKDPWWPELAGRIS-----MVNSP 281
DP G +A PY WGT IGY K + + I+ W + PE ++S ++S
Sbjct: 120 DP-GNQYAVPYLWGTNGIGYNVEKVKAVLGVDKIDSWAVLFEPENIKKLSSCGVAFLDSA 178
Query: 282 REVIVA--------------GGKIAVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGW 327
E++ A + L + V F S+ Y+ GD+ VA G+
Sbjct: 179 DEMLPAVLNYMGLDPNSTKEADYKKAEAKLMAIRPYVTYFHSSKYITDLANGDICVAAGF 238
Query: 328 SSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIPAASRLETKQIGGQVRGPSPLI 381
S DV A R +A +PK G +LW D+ AIPA S+ ++ S I
Sbjct: 239 SGDVFQAKARAEEAGKGVKLAYSIPKEGGNLWFDMLAIPADSK--------NIKAASAFI 290
Query: 382 HQWIE 386
+ +E
Sbjct: 291 NYMLE 295
>gi|325275911|ref|ZP_08141758.1| extracellular solute-binding protein [Pseudomonas sp. TJI-51]
gi|324098961|gb|EGB96960.1| extracellular solute-binding protein [Pseudomonas sp. TJI-51]
Length = 359
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 72/163 (44%), Gaps = 27/163 (16%)
Query: 226 EIDPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGRIS------M 277
E++ G + PY WG+ IGY K + + AP++ W + PE ++ +
Sbjct: 111 EVNDPGNQYGFPYLWGSTGIGYNIDKVKAVLGDNAPLDSWDLIFKPEYMSKLKSCGVAVL 170
Query: 278 VNSPREVIVAGGKIAV---QQNLA------LLANQVR----LFDSTHYLKAFGIGDVWVA 324
N P + +A + + QN A L QVR F S+ Y GDV V
Sbjct: 171 DNGPELLPIALHYLGLPHHSQNPADYDKAKALLMQVRPYISYFHSSKYTGDLANGDVCVV 230
Query: 325 VGWSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIPA 361
VG+S DVL A R V +PK GA LW D+ A+PA
Sbjct: 231 VGFSGDVLQAKNRAEEAHNGVKVGYSIPKEGAPLWFDMVAMPA 273
>gi|422745667|ref|ZP_16799606.1| bacterial extracellular solute-binding protein [Staphylococcus
aureus subsp. aureus MRSA131]
gi|320141082|gb|EFW32929.1| bacterial extracellular solute-binding protein [Staphylococcus
aureus subsp. aureus MRSA131]
Length = 357
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 68/149 (45%), Gaps = 17/149 (11%)
Query: 230 RGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVI-VAG 288
RG ++ PY +GT+ I Y K K+ N + + WK + P+ +I +V+ RE+I ++
Sbjct: 128 RGNKYSLPYFFGTVGILYNKEKYPNESF---DSWKSLYNPKFKNQILLVDGAREIIGMSL 184
Query: 289 GKIA-------------VQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAV 335
K+ +++L LA QVR + +AV WS P V
Sbjct: 185 NKLGYNLNDRNSHHLKEAERDLTKLAPQVRGVVGDEITMMLQQNEGNIAVVWSGVAAPLV 244
Query: 336 KRMSNVAVVVPKSGASLWADLWAIPAASR 364
+ V+PK G++LW D IP ++
Sbjct: 245 QEGDKYNYVIPKEGSNLWFDNMVIPKTAQ 273
>gi|71278418|ref|YP_266871.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Colwellia psychrerythraea 34H]
gi|71144158|gb|AAZ24631.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Colwellia psychrerythraea 34H]
Length = 369
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 74/160 (46%), Gaps = 28/160 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWK---DPWWPELAGR--ISMVNS 280
DP G A PY WGT IGY ++ + + AP + + +P + E G+ +++++S
Sbjct: 124 DP-GNQHAVPYLWGTNGIGYNVAQVKAALGDDAPTDSLELIFNPKYAEKLGKCGLAVLDS 182
Query: 281 PREVI--------------VAGGKIAVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVG 326
P E+I A A + LA + + F S+ Y+ GD+ VA G
Sbjct: 183 PDEMIPQALLYLGLNPNSHKASDYKAAGKLLAEIRPHITYFHSSRYITDLANGDICVAYG 242
Query: 327 WSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIP 360
+S DV A R + +PK GA+LW D+ AIP
Sbjct: 243 FSGDVFQAKARAEEAGNGHIIEYKIPKEGANLWFDMLAIP 282
>gi|345871207|ref|ZP_08823154.1| extracellular solute-binding protein family 1 [Thiorhodococcus
drewsii AZ1]
gi|343920617|gb|EGV31346.1| extracellular solute-binding protein family 1 [Thiorhodococcus
drewsii AZ1]
Length = 396
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 72/161 (44%), Gaps = 28/161 (17%)
Query: 227 IDPRGKIWAAPYRWGTMAIG--YKKSKFQNHNLAPIEDWKDPWWPELAGR-----ISMVN 279
IDP G + PY WGT +G KK K AP++ W + P+ A + I++++
Sbjct: 150 IDP-GHAYLVPYMWGTTGLGVNLKKVKAALGEDAPMDTWGLIFDPDKASKLAGCGIALLD 208
Query: 280 SPREVIVAG----GK-------IAVQQNLALLANQ---VRLFDSTHYLKAFGIGDVWVAV 325
EV A GK + L+ +R F S+ Y+ GD+ VA
Sbjct: 209 DATEVFAAALAYLGKDPNSLAKDDLAAAAELIKGAHPYIRYFHSSQYITDLANGDLCVAH 268
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIP 360
G+S DVL A +R V +P+ GA LW D+ AIP
Sbjct: 269 GYSGDVLQAKERAEEAGKGVEVGYRIPREGAVLWTDVMAIP 309
>gi|317495185|ref|ZP_07953555.1| extracellular solute-binding protein [Gemella morbillorum M424]
gi|316914607|gb|EFV36083.1| extracellular solute-binding protein [Gemella morbillorum M424]
Length = 358
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 66/154 (42%), Gaps = 17/154 (11%)
Query: 227 IDPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVI- 285
DP + ++ PY WGT+ I Y K+K + E W D W L I +++ RE++
Sbjct: 125 FDPNNE-YSVPYFWGTLGIVYNKTKVPSD--LKFEKWDDLWDARLENNILLIDGAREMMG 181
Query: 286 ----VAGGKI----AVQQNLA-----LLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVL 332
G + V NLA LL V+ ++ + WV+V +S D
Sbjct: 182 IALQSEGNSVNDTNEVNLNLAEKKLELLHKNVKAINADEKKMLMINNEAWVSVVFSGDAS 241
Query: 333 PAVKRMSNVAVVVPKSGASLWADLWAIPAASRLE 366
+ N+ VPK G +LW D IP S+ E
Sbjct: 242 AIMTENENMVYSVPKEGTNLWFDNIVIPKTSKNE 275
>gi|387142714|ref|YP_005731107.1| ABC transporter extracellular binding protein [Staphylococcus
aureus subsp. aureus TW20]
gi|269940597|emb|CBI48976.1| ABC transporter extracellular binding protein [Staphylococcus
aureus subsp. aureus TW20]
Length = 357
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 68/149 (45%), Gaps = 17/149 (11%)
Query: 230 RGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVI-VAG 288
RG ++ PY +GT+ I Y K K+ N + + WK + P+ +I +V+ RE+I ++
Sbjct: 128 RGNKYSLPYFFGTVGILYNKEKYPNESF---DSWKSLYNPKFKNQILLVDGAREIIGMSL 184
Query: 289 GKIA-------------VQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAV 335
K+ +++L LA QVR + +AV WS P V
Sbjct: 185 NKLGYNLNDRNSHHLKEAERDLTKLAPQVRGVVGDEITMMLQQNEGNIAVVWSGVAAPLV 244
Query: 336 KRMSNVAVVVPKSGASLWADLWAIPAASR 364
+ V+PK G++LW D IP ++
Sbjct: 245 QEGDKYNYVIPKEGSNLWFDNMVIPKTAQ 273
>gi|170719470|ref|YP_001747158.1| extracellular solute-binding protein [Pseudomonas putida W619]
gi|169757473|gb|ACA70789.1| extracellular solute-binding protein family 1 [Pseudomonas putida
W619]
Length = 401
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 71/163 (43%), Gaps = 27/163 (16%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQNH-NLAPIEDWKDPWWPELAGRIS-----MVNSP 281
DP G +A PY WGT IGY K + + I+ W + PE ++S ++S
Sbjct: 157 DP-GNQYAVPYLWGTNGIGYNVDKVKAALGVDTIDSWAVLFEPENMKKLSQCGVAFLDSA 215
Query: 282 REVIVA--------------GGKIAVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGW 327
E++ A +Q L + V F S+ Y+ GD+ VA G+
Sbjct: 216 DEMLPAVLNYMGLDPNSTNPKDYEKAEQKLLAVRPYVTYFHSSKYITDLANGDICVAAGF 275
Query: 328 SSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
S DV A R N+A +PK G +LW D+ A+P ++
Sbjct: 276 SGDVFQAKARAEEAEKGVNLAYAIPKEGGNLWFDVLAVPKDAK 318
>gi|66048088|ref|YP_237929.1| extracellular solute-binding protein [Pseudomonas syringae pv.
syringae B728a]
gi|63258795|gb|AAY39891.1| extracellular solute-binding protein, family 1 [Pseudomonas
syringae pv. syringae B728a]
Length = 364
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 70/163 (42%), Gaps = 27/163 (16%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN-HNLAPIEDWKDPWWPELAGRIS-----MVNSP 281
DP G +A PY WGT IGY K + + I+ W + PE ++S ++S
Sbjct: 120 DP-GNQYAVPYLWGTNGIGYNVEKVKAVLGVDKIDSWAVLFEPENIKKLSSCGVAFLDSA 178
Query: 282 REVIVA--------------GGKIAVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGW 327
E++ A + L + V F S+ Y+ GD+ VA G+
Sbjct: 179 DEMLPAVLNYLGLDPNSTKEADYKEAEAKLMAIRPYVTYFHSSKYITDLANGDICVAAGF 238
Query: 328 SSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIPAASR 364
S DV A R +A +PK G +LW D+ AIPA S+
Sbjct: 239 SGDVFQAKARAEEAGKGVKLAYSIPKEGGNLWFDMLAIPADSK 281
>gi|443472343|ref|ZP_21062372.1| Putrescine ABC transporter putrescine-binding protein PotF
[Pseudomonas pseudoalcaligenes KF707]
gi|442902685|gb|ELS28201.1| Putrescine ABC transporter putrescine-binding protein PotF
[Pseudomonas pseudoalcaligenes KF707]
Length = 366
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 74/161 (45%), Gaps = 27/161 (16%)
Query: 226 EIDPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMV 278
E+ G +A PY WG++ IGY K + + AP++ W + PE + +S +
Sbjct: 118 EVSDPGNQYAFPYMWGSIGIGYNPDKVKAVLGDNAPVDSWDLLFKPENIEKLKSCGVSFL 177
Query: 279 NSPREVI-----------VAGGKIAVQQNLALLAN---QVRLFDSTHYLKAFGIGDVWVA 324
+SP E++ V+ +++ AL + F S+ Y+ G++ VA
Sbjct: 178 DSPTEILPIALHYLGYSPVSQDPKELKEAEALFLKIRPHITYFHSSKYISDLANGNLCVA 237
Query: 325 VGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAI 359
VG+S DV A R NVA +PK GA + D+ AI
Sbjct: 238 VGYSGDVYQAKSRADEAKAGVNVAYNIPKEGAGTFFDMVAI 278
>gi|104780265|ref|YP_606763.1| periplasmic polyamine-binding protein [Pseudomonas entomophila L48]
gi|95109252|emb|CAK13949.1| putative periplasmic polyamine-binding protein [Pseudomonas
entomophila L48]
Length = 359
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 69/163 (42%), Gaps = 27/163 (16%)
Query: 226 EIDPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPEL------AGRISM 277
E++ G + PY WG+ IGY K + N API+ W + PE G +
Sbjct: 111 EVNDPGNQYGFPYLWGSTGIGYNIDKVKAVLGNNAPIDSWDLFFKPEYLSKLKSCGVAVL 170
Query: 278 VNSPREVIVAGGKIAV---QQN----------LALLANQVRLFDSTHYLKAFGIGDVWVA 324
N P + +A + + QN L + + F S+ Y GDV V
Sbjct: 171 DNGPELLPIALHYLGLPHHSQNPADYDKAKDLLMKVRPYISYFHSSKYTGDLANGDVCVV 230
Query: 325 VGWSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIPA 361
VG+S DVL A R V +PK GA +W D+ A+PA
Sbjct: 231 VGFSGDVLQAKNRAEEAKNGVKVGYSIPKEGAPMWFDMVAMPA 273
>gi|15603249|ref|NP_246323.1| protein PotD [Pasteurella multocida subsp. multocida str. Pm70]
gi|12721758|gb|AAK03468.1| PotD [Pasteurella multocida subsp. multocida str. Pm70]
Length = 311
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 81/183 (44%), Gaps = 30/183 (16%)
Query: 226 EIDPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREV- 284
E DP+ + ++ PY +G IG + + + I W D W PE G++ + + REV
Sbjct: 82 EFDPQNQ-YSLPYIYGLTGIGINAEEI---DPSKITSWADLWKPEYKGKVLLTSDAREVF 137
Query: 285 ---IVAGGK-------IAVQQ---NLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDV 331
++ GK + ++Q L L V +F+S + G+V + + W+
Sbjct: 138 HIALLLNGKSPNTTKELEIKQAYEKLVKLMPNVLVFNSDSPEVPYVQGEVALGMIWNGSA 197
Query: 332 LPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGQVRGPSPLIHQWIEFCLQT 391
K SN+ + PK GA W D +AIP ++ V G +Q+I+F L+
Sbjct: 198 YLGNKENSNIQFIYPKEGAIFWMDNYAIPKKAK--------NVEGA----YQFIDFLLRP 245
Query: 392 ARA 394
A
Sbjct: 246 ENA 248
>gi|402814635|ref|ZP_10864229.1| spermidine/putrescine-binding periplasmic protein 2 [Paenibacillus
alvei DSM 29]
gi|402508482|gb|EJW19003.1| spermidine/putrescine-binding periplasmic protein 2 [Paenibacillus
alvei DSM 29]
Length = 348
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 68/153 (44%), Gaps = 19/153 (12%)
Query: 226 EIDPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVI 285
E DP G ++ Y WG I Y + AP DW D W E G++ +++ RE+I
Sbjct: 119 EFDP-GNKYSIVYTWGVTGIAYNTKYVKQ---APT-DWADLWKDEYKGKVLLLDDNREII 173
Query: 286 VAGGKIAVQQN--------------LALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDV 331
K A + N L L V FD+ + + + W+ WS D
Sbjct: 174 GMALKKAGKSNSSENEADINAAVDDLRKLVPNVLAFDTDNIKQKMIAEEGWIGTVWSGDA 233
Query: 332 LPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 364
+VA ++PK+G+++++D +AIP S+
Sbjct: 234 SVIHGENPDVAFMIPKTGSTIFSDNYAIPKGSK 266
>gi|429103745|ref|ZP_19165719.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Cronobacter turicensis 564]
gi|426290394|emb|CCJ91832.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Cronobacter turicensis 564]
Length = 370
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 77/185 (41%), Gaps = 31/185 (16%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP K +A PY W T IGY K + P+ W PE + +S +++
Sbjct: 124 DPDNK-YAMPYLWATTGIGYNVDKVKAALGTDVPLNSWDLVLKPENLEKLKSCGVSFLDA 182
Query: 281 PREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAV 325
P E+ A +L L L +R F S+ Y+ GD+ VA+
Sbjct: 183 PEEIFATVLNYLGKDPNSSKADDYSGAATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 242
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIP--AASRLETKQIGGQVRGP 377
GW+ DV A R N++ +PK GA + D++A+P A ++ E Q + P
Sbjct: 243 GWAGDVWQAANRAKEAKNGVNISYTIPKEGALAFFDVFAMPADAKNKDEAYQFLNYLMRP 302
Query: 378 SPLIH 382
+ H
Sbjct: 303 DVMAH 307
>gi|383777608|ref|YP_005462174.1| putative ABC transporter substrate-binding protein [Actinoplanes
missouriensis 431]
gi|381370840|dbj|BAL87658.1| putative ABC transporter substrate-binding protein [Actinoplanes
missouriensis 431]
Length = 416
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 69/151 (45%), Gaps = 22/151 (14%)
Query: 227 IDPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREV-- 284
DP G +++ P+ G I Y SK PI D W P G++ M++ E+
Sbjct: 170 FDP-GNVFSVPWASGITGIAYDPSKVDR----PITKLADLWDPAFKGKVGMMSDLTELAN 224
Query: 285 --IVAGG-------KIAVQQNLALLANQ-----VRLFDSTHYLKAFGIGDVWVAVGWSSD 330
++A G + ++ A L Q VR + Y+ A G G+VW+ WS D
Sbjct: 225 FGMLAAGVKPGESDEAGWKKGAAKLKQQKDAGIVRQYYEQDYVDALGNGEVWITQAWSGD 284
Query: 331 VLPA-VKRMSNVAVVVPKSGASLWADLWAIP 360
+ + +N+ V+P+ G ++W D +AIP
Sbjct: 285 IFQKNLSDGTNLKFVIPEEGGTIWTDNFAIP 315
>gi|354586089|ref|ZP_09004762.1| extracellular solute-binding protein family 1 [Paenibacillus lactis
154]
gi|353183065|gb|EHB48597.1| extracellular solute-binding protein family 1 [Paenibacillus lactis
154]
Length = 350
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 83/192 (43%), Gaps = 23/192 (11%)
Query: 227 IDPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVIV 286
DP G ++ Y G I Y K ++ I W+D W PE G++ +++ RE+I
Sbjct: 122 FDP-GNKYSIVYTSGVTGIAYNKKYVKDE----INSWEDLWNPEYKGKVLLLDDNREMIG 176
Query: 287 AGGKIAVQQN--------------LALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVL 332
K + N L L V FD+ + + + W+A WS D
Sbjct: 177 MALKKQGKSNSTTDEAEINAAALDLKTLLPNVLAFDTDNIKQKMIQEEGWIATVWSGDAA 236
Query: 333 PAVKRMSNVAVVVPKSGASLWADLWAIPAASR---LETKQIGGQVR-GPSPLIHQWIEFC 388
+ +VA VVP+ GA++++D +AIP ++ L K I + S +++I +
Sbjct: 237 FIAEENPDVAYVVPEEGATIFSDNYAIPKGAKNKELAEKFINFMLEPEVSAKNYEYIGYS 296
Query: 389 LQTARALPFKQE 400
+A+ F E
Sbjct: 297 NPNTKAMEFHSE 308
>gi|21282714|ref|NP_645802.1| hypothetical protein MW0985 [Staphylococcus aureus subsp. aureus
MW2]
gi|49485940|ref|YP_043161.1| ABC transporter extracellular binding protein [Staphylococcus
aureus subsp. aureus MSSA476]
gi|57651711|ref|YP_185975.1| spermidine/putrescine ABC transporter substrate-binding protein
[Staphylococcus aureus subsp. aureus COL]
gi|87160442|ref|YP_493700.1| spermidine/putrescine ABC transporter spermidine/putrescine-binding
protein [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|88194801|ref|YP_499598.1| spermidine/putrescine ABC transporter spermidine/putrescine-binding
protein [Staphylococcus aureus subsp. aureus NCTC 8325]
gi|151221180|ref|YP_001332002.1| spermidine/putrescine ABC transporter binding protein
[Staphylococcus aureus subsp. aureus str. Newman]
gi|161509283|ref|YP_001574942.1| spermidine/putrescine ABC transporter ATP-binding protein
[Staphylococcus aureus subsp. aureus USA300_TCH1516]
gi|221140498|ref|ZP_03564991.1| spermidine/putrescine ABC transporter ATP-binding protein
[Staphylococcus aureus subsp. aureus str. JKD6009]
gi|258451951|ref|ZP_05699967.1| spermidine/putrescine ABC transporter [Staphylococcus aureus A5948]
gi|262048688|ref|ZP_06021570.1| hypothetical protein SAD30_1518 [Staphylococcus aureus D30]
gi|262052208|ref|ZP_06024414.1| hypothetical protein SA930_0899 [Staphylococcus aureus 930918-3]
gi|282925286|ref|ZP_06332943.1| spermidine/putrescine transport system substrate-binding protein
[Staphylococcus aureus A9765]
gi|284024027|ref|ZP_06378425.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Staphylococcus
aureus subsp. aureus 132]
gi|294848091|ref|ZP_06788838.1| spermidine/putrescine transport system substrate-binding protein
[Staphylococcus aureus A9754]
gi|297208260|ref|ZP_06924690.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Staphylococcus aureus
subsp. aureus ATCC 51811]
gi|300912337|ref|ZP_07129780.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Staphylococcus aureus
subsp. aureus TCH70]
gi|304381340|ref|ZP_07363993.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Staphylococcus aureus
subsp. aureus ATCC BAA-39]
gi|379014295|ref|YP_005290531.1| spermidine/putrescine ABC transporter spermidine/putrescine-binding
protein [Staphylococcus aureus subsp. aureus VC40]
gi|384861697|ref|YP_005744417.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Staphylococcus aureus
subsp. aureus str. JKD6008]
gi|384869635|ref|YP_005752349.1| Spermidine/putrescine ABC transporter, binding protein
[Staphylococcus aureus subsp. aureus T0131]
gi|415689676|ref|ZP_11452904.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Staphylococcus aureus
subsp. aureus CGS01]
gi|417648467|ref|ZP_12298291.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21189]
gi|418276767|ref|ZP_12891604.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21178]
gi|418284909|ref|ZP_12897612.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21209]
gi|418312572|ref|ZP_12924081.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21334]
gi|418318061|ref|ZP_12929476.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21232]
gi|418571242|ref|ZP_13135481.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21283]
gi|418578933|ref|ZP_13143028.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIG1114]
gi|418642691|ref|ZP_13204877.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus IS-24]
gi|418644664|ref|ZP_13206804.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus IS-55]
gi|418647730|ref|ZP_13209793.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus IS-88]
gi|418649611|ref|ZP_13211639.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus IS-91]
gi|418660329|ref|ZP_13221959.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus IS-111]
gi|418872027|ref|ZP_13426385.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus IS-125]
gi|418903312|ref|ZP_13457353.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIG1770]
gi|418906039|ref|ZP_13460066.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIGC345D]
gi|418925272|ref|ZP_13479175.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIG2018]
gi|418928359|ref|ZP_13482245.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIG1612]
gi|418933937|ref|ZP_13487761.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIGC128]
gi|418949006|ref|ZP_13501278.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus IS-157]
gi|418954507|ref|ZP_13506467.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus IS-189]
gi|418987924|ref|ZP_13535597.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIG1835]
gi|419775168|ref|ZP_14301110.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus CO-23]
gi|421150743|ref|ZP_15610397.1| spermidine/putrescine-binding periplasmic protein precursor
[Staphylococcus aureus subsp. aureus str. Newbould 305]
gi|422743508|ref|ZP_16797492.1| bacterial extracellular solute-binding protein [Staphylococcus
aureus subsp. aureus MRSA177]
gi|424784929|ref|ZP_18211732.1| ABC transporter, periplasmic spermidine putrescine-binding protein
[Staphylococcus aureus CN79]
gi|440705897|ref|ZP_20886649.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21282]
gi|440734550|ref|ZP_20914162.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Staphylococcus aureus
subsp. aureus DSM 20231]
gi|443640501|ref|ZP_21124490.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21196]
gi|448742029|ref|ZP_21723984.1| ABC transporter extracellular binding protein [Staphylococcus
aureus KT/314250]
gi|448744664|ref|ZP_21726548.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Staphylococcus aureus
KT/Y21]
gi|21204152|dbj|BAB94850.1| potD [Staphylococcus aureus subsp. aureus MW2]
gi|49244383|emb|CAG42811.1| ABC transporter extracellular binding protein [Staphylococcus
aureus subsp. aureus MSSA476]
gi|57285897|gb|AAW37991.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Staphylococcus
aureus subsp. aureus COL]
gi|87126416|gb|ABD20930.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Staphylococcus
aureus subsp. aureus USA300_FPR3757]
gi|87202359|gb|ABD30169.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein, putative
[Staphylococcus aureus subsp. aureus NCTC 8325]
gi|150373980|dbj|BAF67240.1| spermidine/putrescine ABC transporter, binding protein
[Staphylococcus aureus subsp. aureus str. Newman]
gi|160368092|gb|ABX29063.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Staphylococcus aureus
subsp. aureus USA300_TCH1516]
gi|257860166|gb|EEV82998.1| spermidine/putrescine ABC transporter [Staphylococcus aureus A5948]
gi|259159879|gb|EEW44917.1| hypothetical protein SA930_0899 [Staphylococcus aureus 930918-3]
gi|259163144|gb|EEW47704.1| hypothetical protein SAD30_1518 [Staphylococcus aureus D30]
gi|282592562|gb|EFB97572.1| spermidine/putrescine transport system substrate-binding protein
[Staphylococcus aureus A9765]
gi|294824891|gb|EFG41313.1| spermidine/putrescine transport system substrate-binding protein
[Staphylococcus aureus A9754]
gi|296886999|gb|EFH25902.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Staphylococcus aureus
subsp. aureus ATCC 51811]
gi|300886583|gb|EFK81785.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Staphylococcus aureus
subsp. aureus TCH70]
gi|302750926|gb|ADL65103.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Staphylococcus aureus
subsp. aureus str. JKD6008]
gi|304340323|gb|EFM06264.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Staphylococcus aureus
subsp. aureus ATCC BAA-39]
gi|315196132|gb|EFU26489.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Staphylococcus aureus
subsp. aureus CGS01]
gi|320143139|gb|EFW34929.1| bacterial extracellular solute-binding protein [Staphylococcus
aureus subsp. aureus MRSA177]
gi|329313770|gb|AEB88183.1| Spermidine/putrescine ABC transporter, binding protein
[Staphylococcus aureus subsp. aureus T0131]
gi|329730735|gb|EGG67114.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21189]
gi|365172308|gb|EHM63035.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21209]
gi|365174045|gb|EHM64445.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21178]
gi|365238217|gb|EHM79054.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21334]
gi|365244753|gb|EHM85410.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21232]
gi|371980946|gb|EHO98143.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21283]
gi|374362992|gb|AEZ37097.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Staphylococcus
aureus subsp. aureus VC40]
gi|375015804|gb|EHS09448.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus IS-24]
gi|375025067|gb|EHS18477.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus IS-55]
gi|375029440|gb|EHS22768.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus IS-88]
gi|375029984|gb|EHS23309.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus IS-91]
gi|375032397|gb|EHS25641.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus IS-111]
gi|375367622|gb|EHS71571.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus IS-125]
gi|375370148|gb|EHS73980.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus IS-157]
gi|375372737|gb|EHS76462.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus IS-189]
gi|377696960|gb|EHT21315.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIG1114]
gi|377719712|gb|EHT43882.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIG1835]
gi|377738271|gb|EHT62280.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIG1612]
gi|377742327|gb|EHT66312.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIG1770]
gi|377746567|gb|EHT70538.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIG2018]
gi|377765339|gb|EHT89189.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIGC345D]
gi|377771717|gb|EHT95471.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIGC128]
gi|383970852|gb|EID86942.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus CO-23]
gi|394329231|gb|EJE55346.1| spermidine/putrescine-binding periplasmic protein precursor
[Staphylococcus aureus subsp. aureus str. Newbould 305]
gi|421956339|gb|EKU08668.1| ABC transporter, periplasmic spermidine putrescine-binding protein
[Staphylococcus aureus CN79]
gi|436431578|gb|ELP28931.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Staphylococcus aureus
subsp. aureus DSM 20231]
gi|436507663|gb|ELP43332.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21282]
gi|443405182|gb|ELS63792.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21196]
gi|445547248|gb|ELY15519.1| ABC transporter extracellular binding protein [Staphylococcus
aureus KT/314250]
gi|445561970|gb|ELY18155.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Staphylococcus aureus
KT/Y21]
Length = 357
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 68/149 (45%), Gaps = 17/149 (11%)
Query: 230 RGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVI-VAG 288
RG ++ PY +GT+ I Y K K+ N + + WK + P+ +I +V+ RE+I ++
Sbjct: 128 RGNKYSLPYFFGTVGILYNKEKYPNESF---DSWKSLYNPKFKNQILLVDGAREIIGMSL 184
Query: 289 GKIA-------------VQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAV 335
K+ +++L LA QVR + +AV WS P V
Sbjct: 185 NKLGYNLNDRNSHHLKEAERDLTKLAPQVRGVVGDEITMMLQQNEGNIAVVWSGVAAPLV 244
Query: 336 KRMSNVAVVVPKSGASLWADLWAIPAASR 364
+ V+PK G++LW D IP ++
Sbjct: 245 QEGDKYNYVIPKEGSNLWFDNMVIPKTAQ 273
>gi|395799458|ref|ZP_10478739.1| putrescine ABC transporter substrate-binding periplasmic protein
[Pseudomonas sp. Ag1]
gi|421141037|ref|ZP_15601031.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas fluorescens BBc6R8]
gi|395336562|gb|EJF68422.1| putrescine ABC transporter substrate-binding periplasmic protein
[Pseudomonas sp. Ag1]
gi|404507808|gb|EKA21784.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas fluorescens BBc6R8]
Length = 364
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 71/159 (44%), Gaps = 27/159 (16%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN-HNLAPIEDWKDPWWPELAGR-----ISMVNSP 281
DP G +A PY WGT IGY K + + I+ W + PE + +S ++S
Sbjct: 120 DP-GNQYAVPYLWGTNGIGYNVDKVKEVLGVDHIDSWAVLFEPENMKKLATCGVSFMDSA 178
Query: 282 REVIVA--------------GGKIAVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGW 327
E++ A ++ L + V F S+ Y+ G++ VA G+
Sbjct: 179 DEMLPAVLNYMGLNPNSTNPEDYKKAEEKLLKVRPYVTYFHSSKYISDLANGNICVAAGF 238
Query: 328 SSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIP 360
S DV A R + N+A V+PK G +LW D+ AIP
Sbjct: 239 SGDVFQAKARAAEAGKGVNIAYVIPKEGGNLWFDVLAIP 277
>gi|427736973|ref|YP_007056517.1| spermidine/putrescine-binding periplasmic protein [Rivularia sp.
PCC 7116]
gi|427372014|gb|AFY55970.1| spermidine/putrescine-binding periplasmic protein [Rivularia sp.
PCC 7116]
Length = 361
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 79/186 (42%), Gaps = 36/186 (19%)
Query: 234 WAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPE--LAGRISMVNSPREVIVAGGKI 291
++ P WGT Y K + P +DW W + L+ RI+++N REVI GG +
Sbjct: 138 YSVPMSWGTTGFIYNSEKLE----TPPQDWDYLWQNQKKLSKRITLLNDAREVI--GGVL 191
Query: 292 A-------------VQQ---NLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAV 335
+QQ L +L + F + + GD+ +A+ +SSD
Sbjct: 192 KMLGYSYNSQSGKQIQQAYEKLQVLKPDIAAFSTDAWRNQILSGDLVLAMCYSSDAFLIT 251
Query: 336 KRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGQVRGPSPLIHQWIEFCLQTARAL 395
+ + + PKSG+SLW D AIP + T I G ++WI F L+ A
Sbjct: 252 RDNPKLKYITPKSGSSLWTDTIAIP----ITTSNIDGA--------YEWINFMLKPEVAA 299
Query: 396 PFKQEV 401
Q +
Sbjct: 300 RMSQRL 305
>gi|422673021|ref|ZP_16732383.1| extracellular solute-binding protein [Pseudomonas syringae pv.
aceris str. M302273]
gi|330970757|gb|EGH70823.1| extracellular solute-binding protein [Pseudomonas syringae pv.
aceris str. M302273]
Length = 364
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 70/163 (42%), Gaps = 27/163 (16%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN-HNLAPIEDWKDPWWPELAGRIS-----MVNSP 281
DP G +A PY WGT IGY K + + I+ W + PE ++S ++S
Sbjct: 120 DP-GNQYAVPYLWGTNGIGYNVEKVKAVLGVDKIDSWAVLFEPENIKKLSSCGVAFLDSA 178
Query: 282 REVIVA--------------GGKIAVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGW 327
E++ A + L + V F S+ Y+ GD+ VA G+
Sbjct: 179 DEMLPAVLNYLGLDPNSTKEADYKKAEAKLMAIRPYVTYFHSSKYITDLANGDICVAAGF 238
Query: 328 SSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIPAASR 364
S DV A R +A +PK G +LW D+ AIPA S+
Sbjct: 239 SGDVFQAKARAEEAGKGVKLAYSIPKEGGNLWFDMLAIPADSK 281
>gi|443641720|ref|ZP_21125570.1| Sperimdine/putrescine ABC-type transport system, substrate-binding
protein [Pseudomonas syringae pv. syringae B64]
gi|443281737|gb|ELS40742.1| Sperimdine/putrescine ABC-type transport system, substrate-binding
protein [Pseudomonas syringae pv. syringae B64]
Length = 364
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 70/163 (42%), Gaps = 27/163 (16%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQNH-NLAPIEDWKDPWWPELAGRIS-----MVNSP 281
DP G +A PY WGT IGY K + + I+ W + PE ++S ++S
Sbjct: 120 DP-GNQYAVPYLWGTNGIGYNVEKVKAALGVDKIDSWAVLFEPENIKKLSSCGVAFLDSA 178
Query: 282 REVIVA--------------GGKIAVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGW 327
E++ A + L + V F S+ Y+ GD+ VA G+
Sbjct: 179 DEMLPAVLNYMGLDPNSTKEADYKKAEAKLLAIRPYVTYFHSSKYITDLANGDICVAAGF 238
Query: 328 SSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIPAASR 364
S DV A R +A +PK G +LW D+ AIPA S+
Sbjct: 239 SGDVFQAKARAEEAGKGVKLAYSIPKEGGNLWFDMLAIPADSK 281
>gi|424069748|ref|ZP_17807192.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas syringae pv. avellanae str. ISPaVe013]
gi|424074540|ref|ZP_17811948.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas syringae pv. avellanae str. ISPaVe037]
gi|407994030|gb|EKG34642.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas syringae pv. avellanae str. ISPaVe013]
gi|407994062|gb|EKG34667.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas syringae pv. avellanae str. ISPaVe037]
Length = 364
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 70/163 (42%), Gaps = 27/163 (16%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQNH-NLAPIEDWKDPWWPELAGRIS-----MVNSP 281
DP G +A PY WGT IGY K + + I+ W + PE ++S ++S
Sbjct: 120 DP-GNQYAVPYLWGTNGIGYNVEKVKAALGVDKIDSWAVLFEPENIKKLSSCGVAFLDSA 178
Query: 282 REVIVA--------------GGKIAVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGW 327
E++ A + L + V F S+ Y+ GD+ VA G+
Sbjct: 179 DEMLPAVLNYMGLDPNSTKEADYKKAEAKLLAIRPYVTYFHSSKYITDLANGDICVAAGF 238
Query: 328 SSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIPAASR 364
S DV A R +A +PK G +LW D+ AIPA S+
Sbjct: 239 SGDVFQAKARAEEAGKGVKLAYSIPKEGGNLWFDMLAIPADSK 281
>gi|119775774|ref|YP_928514.1| polyamine ABC transporter periplasmic polyamine-binding protein
[Shewanella amazonensis SB2B]
gi|119768274|gb|ABM00845.1| polyamine ABC transporter, periplasmic polyamine-binding protein
[Shewanella amazonensis SB2B]
Length = 366
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 73/160 (45%), Gaps = 28/160 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP G A PY WGT IG+ +K + AP++ W + P A + I++++S
Sbjct: 121 DP-GNEHAVPYLWGTTGIGFNVAKVKEVLGEDAPVDSWDLIFNPANAEKLAKCGIAVLDS 179
Query: 281 PREVIV-AGGKIAVQQN-------------LALLANQVRLFDSTHYLKAFGIGDVWVAVG 326
P E++ A + + N L + ++ F S+ Y+ G++ A+G
Sbjct: 180 PDEILPPALNYLGLNPNSTDPADYEKAGEVLLKIRPYLKYFHSSRYISDLANGEICAAIG 239
Query: 327 WSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIP 360
WS DVL A R V +PK GA LW D+ AIP
Sbjct: 240 WSGDVLQAQARAEEAGNGQQVDYRIPKEGAPLWFDMMAIP 279
>gi|418911709|ref|ZP_13465692.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIG547]
gi|377725087|gb|EHT49202.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIG547]
Length = 357
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 68/149 (45%), Gaps = 17/149 (11%)
Query: 230 RGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVI-VAG 288
RG ++ PY +GT+ I Y K K+ N + + WK + P+ +I +V+ RE+I ++
Sbjct: 128 RGNKYSLPYFFGTVGILYNKEKYPNESF---DSWKSLYNPKFKNQILLVDGAREIIGMSL 184
Query: 289 GKIA-------------VQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAV 335
K+ +++L LA QVR + +AV WS P V
Sbjct: 185 NKLGYNLNDRNSHHLKEAERDLTKLAPQVRGVVGDEITMMLQQNEGNIAVVWSGVAAPLV 244
Query: 336 KRMSNVAVVVPKSGASLWADLWAIPAASR 364
+ V+PK G++LW D IP ++
Sbjct: 245 QEGDKYNYVIPKEGSNLWFDNMVIPKTAQ 273
>gi|418316622|ref|ZP_12928059.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21340]
gi|365240901|gb|EHM81660.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21340]
Length = 357
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 68/149 (45%), Gaps = 17/149 (11%)
Query: 230 RGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVI-VAG 288
RG ++ PY +GT+ I Y K K+ N + + WK + P+ +I +V+ RE+I ++
Sbjct: 128 RGNKYSLPYFFGTVGILYNKEKYPNESF---DSWKSLYNPKFKNQILLVDGAREIIGMSL 184
Query: 289 GKIA-------------VQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAV 335
K+ +++L LA QVR + +AV WS P V
Sbjct: 185 NKLGYNLNDRNSHHLKEAERDLTKLAPQVRGVVGDEITMMLQQNEGNIAVVWSGVAAPLV 244
Query: 336 KRMSNVAVVVPKSGASLWADLWAIPAASR 364
+ V+PK G++LW D IP ++
Sbjct: 245 QEGDKYNYVIPKEGSNLWFDNMVIPKTAQ 273
>gi|347548214|ref|YP_004854542.1| putative spermidine/putrescine-binding protein [Listeria ivanovii
subsp. ivanovii PAM 55]
gi|346981285|emb|CBW85222.1| Putative spermidine/putrescine-binding protein [Listeria ivanovii
subsp. ivanovii PAM 55]
Length = 357
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 91/203 (44%), Gaps = 34/203 (16%)
Query: 234 WAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVIVAG----G 289
++ PY WGT+ I Y K F + N + W + P+L +I +++ REV+ G G
Sbjct: 132 YSMPYFWGTLGIIYNKEMFPDKNF---DTWDALFDPDLKNQILLIDGAREVMGLGLNSLG 188
Query: 290 KIAVQQNLA-LLANQVRLFDSTHYLKAFGIGD----------VWVAVGWSSDVLPAVKRM 338
N A L+ + +L T +KA +GD VAV +S + +
Sbjct: 189 YSLNDTNKAHLMEARDKLETMTPNVKAV-VGDEIKLLMADNEAGVAVTFSGEAAEMLSEN 247
Query: 339 SNVAVVVPKSGASLWADLWAIPAASRLETKQIGGQVRGPSPLIHQWIEFCLQTARALPFK 398
++ V+PK G++LW D IP + K + G H++I F L+ A
Sbjct: 248 EDLEYVIPKDGSNLWFDNMVIPKTA----KNVNGA--------HKFINFMLKPENA-AIN 294
Query: 399 QEVIPGASPSALESTLVKLPEEL 421
E + A+P+ E + LP+E+
Sbjct: 295 AEYVGYATPN--EKAVKLLPKEI 315
>gi|330812452|ref|YP_004356914.1| putrescine ABC transporter periplasmic protein [Pseudomonas
brassicacearum subsp. brassicacearum NFM421]
gi|423699956|ref|ZP_17674446.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas fluorescens Q8r1-96]
gi|327380560|gb|AEA71910.1| Putrescine ABC transporter, periplasmic component [Pseudomonas
brassicacearum subsp. brassicacearum NFM421]
gi|387996769|gb|EIK58099.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas fluorescens Q8r1-96]
Length = 365
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 70/159 (44%), Gaps = 27/159 (16%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN-HNLAPIEDWKDPWWPELAGR-----ISMVNSP 281
DP G +A PY WGT IGY K + + I+ W + PE + +S ++S
Sbjct: 121 DP-GNQYAVPYLWGTNGIGYNVEKIKAVLGVEKIDSWAMLFEPENIKKLSSCGVSFLDSG 179
Query: 282 REVIVAGGKI--------------AVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGW 327
E+I A + L + V F+S+ Y+ G++ VA G+
Sbjct: 180 DEMIPAMLNYLGLNPNSEDPEDYKKAEAQLLKIRPYVTYFNSSKYISDLANGEICVAAGF 239
Query: 328 SSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIP 360
S D+ A R S +A V+PK G +LW D+ AIP
Sbjct: 240 SGDIFQARARASEAGKGVEIAYVIPKEGGNLWFDMLAIP 278
>gi|253731713|ref|ZP_04865878.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Staphylococcus aureus
subsp. aureus USA300_TCH959]
gi|253733663|ref|ZP_04867828.1| spermidine/putrescine-binding protein precursor family protein
[Staphylococcus aureus subsp. aureus TCH130]
gi|417655595|ref|ZP_12305305.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21193]
gi|417899575|ref|ZP_12543477.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21259]
gi|417901564|ref|ZP_12545440.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21266]
gi|418598462|ref|ZP_13161972.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21343]
gi|253724527|gb|EES93256.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Staphylococcus aureus
subsp. aureus USA300_TCH959]
gi|253728363|gb|EES97092.1| spermidine/putrescine-binding protein precursor family protein
[Staphylococcus aureus subsp. aureus TCH130]
gi|329728813|gb|EGG65234.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21193]
gi|341844503|gb|EGS85715.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21259]
gi|341845403|gb|EGS86605.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21266]
gi|374399819|gb|EHQ70955.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21343]
Length = 357
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 68/149 (45%), Gaps = 17/149 (11%)
Query: 230 RGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVI-VAG 288
RG ++ PY +GT+ I Y K K+ N + + WK + P+ +I +V+ RE+I ++
Sbjct: 128 RGNKYSLPYFFGTVGILYNKEKYPNESF---DSWKSLYNPKFKNQILLVDGAREIIGMSL 184
Query: 289 GKIA-------------VQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAV 335
K+ +++L LA QVR + +AV WS P V
Sbjct: 185 NKLGYNLNDRNSHHLKEAERDLTKLAPQVRGVVGDEITMMLQQNEGNIAVVWSGVAAPLV 244
Query: 336 KRMSNVAVVVPKSGASLWADLWAIPAASR 364
+ V+PK G++LW D IP ++
Sbjct: 245 QEGDKYNYVIPKEGSNLWFDNMVIPKTAQ 273
>gi|219871497|ref|YP_002475872.1| spermidine/putrescine-binding periplasmic protein (SPBP)
[Haemophilus parasuis SH0165]
gi|219691701|gb|ACL32924.1| spermidine/putrescine-binding periplasmic protein (SPBP)
[Haemophilus parasuis SH0165]
Length = 349
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 91/219 (41%), Gaps = 42/219 (19%)
Query: 226 EIDPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREV- 284
E DP K ++ PY +G IG S + + I W D W PE G++ ++N REV
Sbjct: 119 EFDPENK-YSLPYVYGLTGIGVNASDI---DPSTITSWGDLWKPEFKGKVLLMNDSREVF 174
Query: 285 ---IVAGGKI----------AVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDV 331
++ GK + L L V +F+S + G+V + + W+
Sbjct: 175 HMALLLDGKSPNTTNADEIKTAYERLTKLVPNVLVFNSDSPEMPYLQGEVAIGMQWTGSA 234
Query: 332 LPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGQVRGPSPLIHQWIEFCLQT 391
A ++ + PK GA +W D + IP ++ K+ H++I+F L+
Sbjct: 235 YRAKSENPDLKFIFPKEGAVIWMDNYVIPKNAK--NKEAA----------HKFIDFLLR- 281
Query: 392 ARALPFKQEVIPGASPSALESTLVKLPEELLKGKPSVDT 430
P ++ + +E+ +P E +K V+T
Sbjct: 282 -----------PESAKTVIETMGFSMPNENVKALLPVET 309
>gi|429095480|ref|ZP_19157586.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Cronobacter dublinensis 582]
gi|426281820|emb|CCJ83699.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Cronobacter dublinensis 582]
Length = 370
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 71/165 (43%), Gaps = 29/165 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP K +A PY W T IGY K + AP+ W PE + +S +++
Sbjct: 124 DPDNK-YAMPYLWATTGIGYNVDKVKAALGKDAPVNSWDLVLKPENLEKLKSCGVSFLDA 182
Query: 281 PREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAV 325
P E+ A +L L L +R F S+ Y+ GD VA+
Sbjct: 183 PEEIFATVLNYLGKDPNSSKADDYSGAATDLLLKLRPNIRYFHSSQYINDLANGDTCVAI 242
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
GW+ DV A R N++ +PK GA + D++A+PA ++
Sbjct: 243 GWAGDVWQAANRAKEAKNGVNISYSIPKEGALAFFDVFAMPADAK 287
>gi|399010898|ref|ZP_10713239.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM17]
gi|398105306|gb|EJL95416.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM17]
Length = 370
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 69/153 (45%), Gaps = 27/153 (17%)
Query: 235 AAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNSPREVIVA 287
A PY WG++ IGY K + + AP W + PE A + IS ++SP E++ A
Sbjct: 131 AFPYMWGSIGIGYNPDKVKAVLGSDAPTNSWDLLFKPENAEKLKACGISFLDSPTEMLPA 190
Query: 288 G-----------GKIAVQQNLALLAN---QVRLFDSTHYLKAFGIGDVWVAVGWSSDVLP 333
K + + AL V F S+ Y+ G++ VAVG+S DVL
Sbjct: 191 ALHYLGYPVTSKDKAQILEAEALFMKIRPSVTYFHSSKYISDLANGNICVAVGYSGDVLQ 250
Query: 334 AVKRMSN------VAVVVPKSGASLWADLWAIP 360
A R VA +PK GA + D+ A+P
Sbjct: 251 ARSRAEEAGNKEKVAFSIPKEGAGSFYDMMAMP 283
>gi|426410011|ref|YP_007030110.1| putrescine-binding periplasmic protein [Pseudomonas sp. UW4]
gi|426268228|gb|AFY20305.1| putrescine-binding periplasmic protein [Pseudomonas sp. UW4]
Length = 365
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 95/221 (42%), Gaps = 35/221 (15%)
Query: 235 AAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNSPREVIVA 287
A PY WG++ IG+ +K + AP W + PE A + IS ++SP E+I
Sbjct: 126 AIPYMWGSIGIGFNPAKVKEVLGANAPTNSWDLLFKPENAEKLKACGISFLDSPTEMIPT 185
Query: 288 G-----------GKIAVQQNLALLAN---QVRLFDSTHYLKAFGIGDVWVAVGWSSDVLP 333
K + Q AL V F S+ Y+ G++ VAVG+S DVL
Sbjct: 186 ALHYLGYPVNDQDKQHIAQAQALFMKIRPNVAYFHSSKYISDLANGNICVAVGYSGDVLQ 245
Query: 334 AVKRMSN------VAVVVPKSGASLWADLWAIP--AASRLETKQIGGQVRGPSPL--IHQ 383
A R + +PK GA+ + D+ A+P AA+ + P + I
Sbjct: 246 AKARAQEAGDKVKIDYSIPKEGAASFYDMLAMPRDAANVENAYLFMNFLMRPDVIADITN 305
Query: 384 WIEFCLQTARALPFKQEVI---PGASPS-ALESTLVKLPEE 420
I + A A P E I PG+ PS A+ + L +P++
Sbjct: 306 NIGYSNANAAATPLVDEAIRNEPGSYPSEAVMAKLYAVPDQ 346
>gi|289672275|ref|ZP_06493165.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas syringae pv. syringae FF5]
gi|422633838|ref|ZP_16698957.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas syringae pv. pisi str. 1704B]
gi|422668304|ref|ZP_16728162.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas syringae pv. aptata str. DSM 50252]
gi|440724022|ref|ZP_20904372.1| spermidine/putrescine ABC transporter substrate-binding protein
[Pseudomonas syringae BRIP34876]
gi|440728705|ref|ZP_20908910.1| spermidine/putrescine ABC transporter substrate-binding protein
[Pseudomonas syringae BRIP34881]
gi|330944393|gb|EGH46414.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas syringae pv. pisi str. 1704B]
gi|330980671|gb|EGH78774.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas syringae pv. aptata str. DSM 50252]
gi|440358665|gb|ELP96011.1| spermidine/putrescine ABC transporter substrate-binding protein
[Pseudomonas syringae BRIP34876]
gi|440360838|gb|ELP98093.1| spermidine/putrescine ABC transporter substrate-binding protein
[Pseudomonas syringae BRIP34881]
Length = 364
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 70/163 (42%), Gaps = 27/163 (16%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQNH-NLAPIEDWKDPWWPELAGRIS-----MVNSP 281
DP G +A PY WGT IGY K + + I+ W + PE ++S ++S
Sbjct: 120 DP-GNQYAVPYLWGTNGIGYNVEKVKAALGVDKIDSWAVLFEPENIKKLSSCGVAFLDSA 178
Query: 282 REVIVA--------------GGKIAVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGW 327
E++ A + L + V F S+ Y+ GD+ VA G+
Sbjct: 179 DEMLPAVLNYMGLDPNSTKEADYKKAEAKLLAIRPYVTYFHSSKYITDLANGDICVAAGF 238
Query: 328 SSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIPAASR 364
S DV A R +A +PK G +LW D+ AIPA S+
Sbjct: 239 SGDVFQAKARAEEAGKGVKLAYSIPKEGGNLWFDMLAIPADSK 281
>gi|418058269|ref|ZP_12696246.1| extracellular solute-binding protein family 1 [Methylobacterium
extorquens DSM 13060]
gi|373568190|gb|EHP94142.1| extracellular solute-binding protein family 1 [Methylobacterium
extorquens DSM 13060]
Length = 367
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 70/160 (43%), Gaps = 28/160 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQNH--NLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP G +A Y WGT IG + + AP+ W P + + +++S
Sbjct: 122 DP-GNTFAVDYMWGTTGIGVNVTAVRERLGANAPLNSWSLVLNPGSIAKLKDCGVMLLDS 180
Query: 281 PREVI-----VAGGK---------IAVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVG 326
P ++I G K AV L + VR F S+ Y+ GDV +AVG
Sbjct: 181 PEDLIPSILPFYGFKSDSKRWDDITAVTDALYKVRGAVRKFHSSEYVNGLANGDVCLAVG 240
Query: 327 WSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIP 360
+S DV+ A KR +A +PK GA +W D +AIP
Sbjct: 241 YSGDVMQAKKRAEESKNGIEIAYFIPKEGALMWFDAFAIP 280
>gi|372276175|ref|ZP_09512211.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Pantoea sp. SL1_M5]
Length = 369
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 71/165 (43%), Gaps = 29/165 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP G +A PY WGT IGY K + AP+ W PE + +S +++
Sbjct: 123 DP-GNKYAIPYLWGTTGIGYNVDKVKAALGADAPVNSWDLVLKPENLEKLKSCGVSFLDA 181
Query: 281 PREVIVAG----GKI-----------AVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAV 325
P E+ GK A L L +R F S+ Y+ G++ VA+
Sbjct: 182 PEEIFATVLNYLGKDPNTSDAKEYSGAATDLLLKLRPNIRYFHSSQYINDLANGNICVAI 241
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
GWS D+L A R ++ VPK GA + D+ AIP ++
Sbjct: 242 GWSGDILQAKNRADAAKNGVHLGYSVPKEGALAFFDMMAIPKDAK 286
>gi|254563346|ref|YP_003070441.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Methylobacterium extorquens DM4]
gi|254270624|emb|CAX26627.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Methylobacterium extorquens DM4]
Length = 366
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 70/160 (43%), Gaps = 28/160 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQNH--NLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP G +A Y WGT IG + + AP+ W P + + +++S
Sbjct: 121 DP-GNTFAVDYMWGTTGIGVNVTAVRERLGANAPLNSWSLVLNPGSIAKLKDCGVMLLDS 179
Query: 281 PREVI-----VAGGK---------IAVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVG 326
P ++I G K AV L + VR F S+ Y+ GDV +AVG
Sbjct: 180 PEDLIPSILPFYGFKSDSKRWDDITAVTDALYKVRGAVRKFHSSEYVNGLANGDVCLAVG 239
Query: 327 WSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIP 360
+S DV+ A KR +A +PK GA +W D +AIP
Sbjct: 240 YSGDVMQAKKRAEESKNGIEIAYFIPKEGALMWFDAFAIP 279
>gi|163796118|ref|ZP_02190080.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [alpha
proteobacterium BAL199]
gi|159178577|gb|EDP63117.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [alpha
proteobacterium BAL199]
Length = 358
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 95/207 (45%), Gaps = 35/207 (16%)
Query: 226 EIDPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPW-WPELAGRISMVNSPREV 284
+ DP G+ ++ PY WGT+ IGY+KS+ P WK + + +GRI+++ +P +V
Sbjct: 128 KFDP-GRKYSLPYMWGTVGIGYRKSRVDG---VP-NSWKALYDSNKYSGRIALLGAPSKV 182
Query: 285 IVAGGKI-----------AVQQNLALLANQ---VRLFDSTHYLKAFGIGDVWVAVGWSSD 330
+ G K +++ +L Q +++F + G+V + + W+ D
Sbjct: 183 LQVGCKYLGWPLNEADPAKLEKVAEMLIKQKPHIKVFAEDNGQDLLLSGEVDLTMEWNGD 242
Query: 331 VLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGQVRGPSPL-IHQWIEFCL 389
+L + +++ VVP G LW D AIP + P P H +I + L
Sbjct: 243 ILQVMAEDKDISYVVPDEGGLLWEDTLAIPNGA-------------PHPENAHAFINYLL 289
Query: 390 QTARALPFKQEVIPGASPSALESTLVK 416
A+A + I A+P+A L+K
Sbjct: 290 D-AKAGAAIADFIQYATPNAAAKALMK 315
>gi|16759787|ref|NP_455404.1| putrescine ABC transporter periplasmic-binding protein [Salmonella
enterica subsp. enterica serovar Typhi str. CT18]
gi|29142440|ref|NP_805782.1| putrescine ABC transporter periplasmic-binding protein [Salmonella
enterica subsp. enterica serovar Typhi str. Ty2]
gi|213855242|ref|ZP_03383482.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Typhi str. M223]
gi|289825027|ref|ZP_06544390.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Typhi str. E98-3139]
gi|25358046|pir||AB0606 putrescine-binding periplasmic protein precursor [imported] -
Salmonella enterica subsp. enterica serovar Typhi
(strain CT18)
gi|16502080|emb|CAD05316.1| putrescine-binding periplasmic protein precursor [Salmonella
enterica subsp. enterica serovar Typhi]
gi|29138070|gb|AAO69631.1| putrescine-binding periplasmic protein precursor [Salmonella
enterica subsp. enterica serovar Typhi str. Ty2]
Length = 370
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 71/165 (43%), Gaps = 29/165 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP K +A PY W T IGY K + + AP+ W PE + +S +++
Sbjct: 124 DPDNK-YAMPYMWATTGIGYNVDKVKAVLGDDAPVNSWDLVLKPENLEKLKSCGVSFLDA 182
Query: 281 PREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAV 325
P E+ A +L L L +R F S+ Y+ GD VA+
Sbjct: 183 PEEIFATVLNYLGKDPNSSKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDTCVAI 242
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
GW+ DV A R N++ +PK G + D++A+PA ++
Sbjct: 243 GWAGDVWQAANRAKEAKNGVNISFSIPKEGVMAFFDVFAMPADAK 287
>gi|167622935|ref|YP_001673229.1| extracellular solute-binding protein [Shewanella halifaxensis
HAW-EB4]
gi|167352957|gb|ABZ75570.1| extracellular solute-binding protein family 1 [Shewanella
halifaxensis HAW-EB4]
Length = 366
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 75/161 (46%), Gaps = 28/161 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGRIS-----MVNS 280
DP G ++ PY WGT IGY K AP++ + + P+ A ++S +++S
Sbjct: 121 DP-GNQYSVPYLWGTNGIGYNVEKVTAVLGEDAPVDSLELIFNPKYAEKVSQCGLSLLDS 179
Query: 281 PREVI-VAGGKIAVQQN-------------LALLANQVRLFDSTHYLKAFGIGDVWVAVG 326
E+I +A + + N LA + + F S+ Y+ GD+ VA G
Sbjct: 180 ADEMIPMALIYLGLDPNSTKADDFKKAGEVLAKVRPYITYFHSSRYITDLANGDICVAFG 239
Query: 327 WSSDVLPAVKRM------SNVAVVVPKSGASLWADLWAIPA 361
+S D+ A R + + +PK G++LW D+ AIPA
Sbjct: 240 YSGDIFQAADRADEAENGNTIEYSIPKEGSNLWFDMLAIPA 280
>gi|241203161|ref|YP_002974257.1| extracellular solute-binding protein [Rhizobium leguminosarum bv.
trifolii WSM1325]
gi|240857051|gb|ACS54718.1| extracellular solute-binding protein family 1 [Rhizobium
leguminosarum bv. trifolii WSM1325]
Length = 365
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 112/261 (42%), Gaps = 48/261 (18%)
Query: 139 RVVSLQN---SVPQSWVKDFMRSQGKRLKF---------QMNLCASIDGIVNNLSTPFNK 186
RVV++ N + S ++DF + G ++ + + L A G ++ P
Sbjct: 27 RVVNVYNWSDYIDSSILEDFTKETGIKVVYDTFDSNETLETKLLAGGSGY--DVVVP--T 82
Query: 187 LSFAIKKRFIEPIAEAEDQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIG 246
+SF +K++ + + D+ L + W V ++ DP G ++ Y WGT IG
Sbjct: 83 VSF-MKRQIAAGVYQKLDKSKLPNLVNMWDVIMKG--VASFDP-GNEYSVDYMWGTTGIG 138
Query: 247 YKKSKFQNHNLAPIE--DWKDPWWPELAGR-----ISMVNSPREVI-------------- 285
Y K + L E +W + P A + I M++SP +V+
Sbjct: 139 YNVDKVKAA-LGTDEKPNWDALFDPAKAAKLKDCGIYMLDSPTDVVPSVLAYLGLNPNST 197
Query: 286 VAGGKIAVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRM--SNVAV 343
A Q L + VR F S+ Y+ A GD+ +A+G+S D+ A R +NV V
Sbjct: 198 DAADLKKAQAVLTAVRPFVRKFHSSEYISALANGDICIALGYSGDMFQARDRAKEANVGV 257
Query: 344 ----VVPKSGASLWADLWAIP 360
VP GA ++ D++ IP
Sbjct: 258 KVDYSVPSQGAQIFFDVFGIP 278
>gi|86356365|ref|YP_468257.1| spermidine/putrescine ABC transporter, substrate-binding protein
[Rhizobium etli CFN 42]
gi|86280467|gb|ABC89530.1| spermidine/putrescine ABC transporter, substrate-binding protein
[Rhizobium etli CFN 42]
Length = 365
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 82/188 (43%), Gaps = 31/188 (16%)
Query: 204 DQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAP---- 259
D+ LS+ W V + A DP G +A Y WGT IGY K L P
Sbjct: 99 DKSKLPNLSNMWDVIQQRTAA--YDP-GNEYAVDYMWGTDGIGYNVKKVA-EILGPDAKP 154
Query: 260 -IEDWKDPWWPELAGR--ISMVNSPREVIVAGGKI--------------AVQQNLALLAN 302
+E DP E I ++++P++V+ K V++ L +
Sbjct: 155 GLEVIFDPKVAEKFKDCGIYVLDTPKDVMTTALKYLGLDPNSTKAEDFKKVEELLTAVRP 214
Query: 303 QVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADL 356
+R F S+ Y+ A GD+ +A G+S D+L A R + V +P GA +W D+
Sbjct: 215 YIRKFHSSEYINALANGDICIAFGYSGDMLQARDRAAEAKNGVEVNYSIPVQGAQMWFDM 274
Query: 357 WAIPAASR 364
AIPA ++
Sbjct: 275 MAIPADAK 282
>gi|148825225|ref|YP_001289978.1| cytoplasmic sugar-binding protein [Haemophilus influenzae PittEE]
gi|229846583|ref|ZP_04466691.1| predicted cytoplasmic sugar-binding protein [Haemophilus influenzae
7P49H1]
gi|148715385|gb|ABQ97595.1| predicted cytoplasmic sugar-binding protein [Haemophilus influenzae
PittEE]
gi|229810676|gb|EEP46394.1| predicted cytoplasmic sugar-binding protein [Haemophilus influenzae
7P49H1]
Length = 350
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 114/287 (39%), Gaps = 59/287 (20%)
Query: 138 LRVVSLQNSVPQSWVKDFMRSQG---------------KRLKFQMNLCASIDGIVNNLST 182
L V + + VP V F + G +LK N +S D +V S
Sbjct: 30 LYVYNWTDYVPSDLVAQFSKETGIEVIYSTFESNEEMYAKLKLTQNTGSSYD-LVFPSSY 88
Query: 183 PFNKLSFAIKKRFIEPIAEAEDQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGT 242
NK+ IK++ ++PI DQ + K L E DP K ++ PY +G
Sbjct: 89 YVNKM---IKEKMLQPI----DQSKLTNIHQIPKHLLNK----EFDPENK-YSLPYVYGL 136
Query: 243 MAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREV----IVAGGK-------- 290
I + + I W D W PE G++ M + REV ++ GK
Sbjct: 137 TGIEVNADEI---DPKTITSWADLWKPEFKGKVLMTSDAREVFHVALLLDGKSPNTTNEE 193
Query: 291 ---IAVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPK 347
A ++ LL N V F+S + G+V + + W+ A K ++ V PK
Sbjct: 194 DIKTAYERLEKLLPN-VATFNSDSPEVPYVQGEVAIGMIWNGSAYLAQKENQSLQFVYPK 252
Query: 348 SGASLWADLWAIPAASRLETKQIGGQVRGPSPLIHQWIEFCLQTARA 394
GA W D +AIP +++ V G H++I+F L+ A
Sbjct: 253 EGAIFWMDNYAIPNSAQ--------NVEGA----HKFIDFLLRPENA 287
>gi|257465625|ref|ZP_05629996.1| spermidine/putrescine-binding periplasmic protein (SPBP)
[Actinobacillus minor 202]
gi|257451285|gb|EEV25328.1| spermidine/putrescine-binding periplasmic protein (SPBP)
[Actinobacillus minor 202]
Length = 359
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 81/190 (42%), Gaps = 34/190 (17%)
Query: 227 IDPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREV-- 284
DP K ++ PY +G IG S+ + L+ W D W E G++ ++N PREV
Sbjct: 129 FDPENK-YSLPYVYGLTGIGINASEIDPNTLS---SWGDLWREEYKGKLLLMNDPREVFH 184
Query: 285 --IVAGGKIAVQQN----------LALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVL 332
++ GK +N L L V +F+S + G+V V + WS
Sbjct: 185 IALLLDGKSPNSENEQEIKSAYERLKKLIPNVLVFNSDSPEMPYLQGEVSVGMQWSGSAY 244
Query: 333 PAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGQVRGPSPLIHQWIEFCLQTA 392
A ++ + PK GA LW D + IP G V + H++I+F L+
Sbjct: 245 RAKNENKDLQFIFPKEGAVLWMDNYVIPK----------GAVNKEAA--HKFIDFLLRPE 292
Query: 393 RALPFKQEVI 402
A +EVI
Sbjct: 293 SA----KEVI 298
>gi|213971986|ref|ZP_03400083.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas syringae pv. tomato T1]
gi|301384876|ref|ZP_07233294.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas syringae pv. tomato Max13]
gi|302062784|ref|ZP_07254325.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas syringae pv. tomato K40]
gi|302133837|ref|ZP_07259827.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas syringae pv. tomato NCPPB 1108]
gi|213923248|gb|EEB56846.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas syringae pv. tomato T1]
Length = 364
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 92/219 (42%), Gaps = 46/219 (21%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN-HNLAPIEDWKDPWWPELAGRIS---------- 276
DP G +A PY WGT IGY K + + I+ W + PE ++S
Sbjct: 120 DP-GNQYAVPYLWGTNGIGYNVDKVKAVLGVDKIDSWSVLFEPENIKKLSSCGVAFLDSA 178
Query: 277 ------MVN----SPREVIVAGGKIAVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVG 326
M+N P A K A + L + V F S+ Y+ GD+ VA G
Sbjct: 179 DEMLPAMLNYLGLDPNSTKEADYKKA-EAKLMAIRPYVTYFHSSKYITDLANGDICVAAG 237
Query: 327 WSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIPAASR------------LETK 368
+S DV A R +A PK G +LW D+ AIPA S+ L+ K
Sbjct: 238 FSGDVFQAKARAEEAGKGVKLAYSTPKEGGNLWFDMLAIPADSKNVKAASAFINYMLDPK 297
Query: 369 ---QIGGQV--RGPSPLIHQWIEFCLQTARALPFKQEVI 402
Q+ +V P+P +++E ++T A+ QEV+
Sbjct: 298 VIAQVSDEVGYANPNPASGEFMEQKIRTDAAVYPPQEVL 336
>gi|398877248|ref|ZP_10632396.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM67]
gi|398883121|ref|ZP_10638081.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM60]
gi|398197378|gb|EJM84358.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM60]
gi|398202975|gb|EJM89807.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM67]
Length = 365
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 95/220 (43%), Gaps = 35/220 (15%)
Query: 235 AAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNSPREVIVA 287
A PY WG++ IG+ +K + AP W + PE A + IS ++SP E++ A
Sbjct: 126 AFPYMWGSIGIGFNPAKVKEVLGANAPTNSWDLLFKPENAEKLKACGISFLDSPTEMLPA 185
Query: 288 G----GKIAVQQNLALLAN----------QVRLFDSTHYLKAFGIGDVWVAVGWSSDVLP 333
G Q+ A +A V F S+ Y+ G++ VAVG+S DVL
Sbjct: 186 ALHYLGYPVNSQDKAQIAEAEALFMKIRPSVAYFHSSKYISDLANGNICVAVGYSGDVLQ 245
Query: 334 AVKRMSN------VAVVVPKSGASLWADLWAIP--AASRLETKQIGGQVRGPSPL--IHQ 383
A R + +PK GA + D+ AIP AA+ + P + I
Sbjct: 246 AKARAQEAGDKVKIEYSIPKEGAGSFYDMVAIPRDAANVDNAYLFMNFLMRPDIIAEITN 305
Query: 384 WIEFCLQTARALPFKQEVI---PGASPS-ALESTLVKLPE 419
I + A A P E I PG+ P A+ +TL +P+
Sbjct: 306 NIGYSNANAAATPLVDEAIRDDPGSYPPLAVMATLYAIPD 345
>gi|443471965|ref|ZP_21062002.1| Putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas pseudoalcaligenes KF707]
gi|442902190|gb|ELS27831.1| Putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas pseudoalcaligenes KF707]
Length = 361
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 68/163 (41%), Gaps = 27/163 (16%)
Query: 226 EIDPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGRIS------- 276
E++ G + PY WG+ IGY K + + AP++ W + PE +++
Sbjct: 113 EVNDPGNQYGFPYLWGSTGIGYNLEKVKAVLGDDAPLDSWDIFFKPEYMEKLAQCGVAVL 172
Query: 277 ------------MVNSPREVIVAGGKIAVQQNLALLANQVRLFDSTHYLKAFGIGDVWVA 324
+ P A A Q L + + F S+ Y+ GDV +A
Sbjct: 173 DNGPELLPITLNYLGLPHHSQTADDYKAAQAALMKVRPYITYFHSSKYVSDLANGDVCMA 232
Query: 325 VGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPA 361
VG+S D+L A R N+ PK G+ +W D+ A+PA
Sbjct: 233 VGFSGDILQAATRAREAGNGVNIQYSTPKEGSPMWFDMVAMPA 275
>gi|92117054|ref|YP_576783.1| extracellular solute-binding protein [Nitrobacter hamburgensis X14]
gi|91799948|gb|ABE62323.1| extracellular solute-binding protein, family 1 [Nitrobacter
hamburgensis X14]
Length = 371
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 75/164 (45%), Gaps = 28/164 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP G +AA Y WGT IGY Q + I+ W + P+ + + M++S
Sbjct: 126 DP-GNRYAASYMWGTTGIGYNVKAAQRILGSDGKIDSWDIIFDPDKLAKFKDCGVQMLDS 184
Query: 281 PREVIVAG-----------GKIAVQQNLALLAN---QVRLFDSTHYLKAFGIGDVWVAVG 326
+++ A K ++Q AL++ VR F S+ YL G++ + VG
Sbjct: 185 ADDILPAALNYLGLDPNSTAKADLEQAAALVSKVRPSVRKFHSSEYLNGLATGEICLVVG 244
Query: 327 WSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
WS D+ A +R + + +PK GA ++ D AIPA ++
Sbjct: 245 WSGDIKQAQRRAAETHNGVEIGYAIPKEGAQMFFDNLAIPADAK 288
>gi|168185699|ref|ZP_02620334.1| spermidine/putrescine-binding periplasmic protein [Clostridium
botulinum C str. Eklund]
gi|169296261|gb|EDS78394.1| spermidine/putrescine-binding periplasmic protein [Clostridium
botulinum C str. Eklund]
Length = 347
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 72/153 (47%), Gaps = 21/153 (13%)
Query: 227 IDPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVI- 285
DP+ + ++ PY WGT+ I Y +++ I+ W W P+ +I MV+S R+ I
Sbjct: 120 FDPKNE-YSVPYMWGTVGIIYNTKLIKDN----IDSWDALWNPKYKEQILMVDSQRDAIA 174
Query: 286 VAGGKIAVQQNLA----LLANQVRLFDSTHYLKAFGIGDVW----------VAVGWSSDV 331
VA ++ N L + L ++ A+ +GD +AV WS D
Sbjct: 175 VALKRLGYSMNTTNKSQLEKAKQELIKQKPFVHAY-VGDEVKDLMTDEEGAIAVVWSGDA 233
Query: 332 LPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 364
+ +K N+ V+PK G++LW D IP ++
Sbjct: 234 VTMMKNNKNLKYVIPKEGSNLWFDNMVIPKGTK 266
>gi|440739397|ref|ZP_20918911.1| putrescine ABC transporter substrate-binding periplasmic protein
[Pseudomonas fluorescens BRIP34879]
gi|447918914|ref|YP_007399482.1| putrescine ABC transporter substrate-binding periplasmic protein
[Pseudomonas poae RE*1-1-14]
gi|440379593|gb|ELQ16183.1| putrescine ABC transporter substrate-binding periplasmic protein
[Pseudomonas fluorescens BRIP34879]
gi|445202777|gb|AGE27986.1| putrescine ABC transporter substrate-binding periplasmic protein
[Pseudomonas poae RE*1-1-14]
Length = 364
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 70/159 (44%), Gaps = 27/159 (16%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN-HNLAPIEDWKDPWWPELAGR-----ISMVNSP 281
DP G +A PY WGT IGY K + + I+ W + PE + +S ++S
Sbjct: 120 DP-GNAYAVPYLWGTNGIGYNVDKVKEVLGVDHIDSWAVLFEPENMKKLASCGVSFMDSA 178
Query: 282 REVIVA--------------GGKIAVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGW 327
E++ A ++ L + V F S+ Y+ G++ VA G+
Sbjct: 179 DEMLPAVLNYMGLDPNSTNPADYKKAEEKLLKVRPYVTYFHSSKYISDLANGNICVAAGF 238
Query: 328 SSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIP 360
S DV A R + N+A +PK G +LW D+ AIP
Sbjct: 239 SGDVFQAKARAAEAGKGVNIAYAIPKEGGNLWFDVLAIP 277
>gi|425898816|ref|ZP_18875407.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas chlororaphis subsp. aureofaciens 30-84]
gi|397891408|gb|EJL07886.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas chlororaphis subsp. aureofaciens 30-84]
Length = 365
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 69/153 (45%), Gaps = 27/153 (17%)
Query: 235 AAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNSPREVIVA 287
A PY WG++ IGY K + + AP W + PE A + IS ++SP E++ A
Sbjct: 126 AFPYMWGSIGIGYNPDKVKAVLGSDAPTNSWDLLFKPENAEKLKACGISFLDSPTEMLPA 185
Query: 288 G-----------GKIAVQQNLALLAN---QVRLFDSTHYLKAFGIGDVWVAVGWSSDVLP 333
K + + AL V F S+ Y+ G++ VAVG+S DVL
Sbjct: 186 ALHYLGYPVTSKDKAQILEAEALFMKIRPSVTYFHSSKYISDLANGNICVAVGYSGDVLQ 245
Query: 334 AVKRMSN------VAVVVPKSGASLWADLWAIP 360
A R VA +PK GA + D+ A+P
Sbjct: 246 ARSRAEEAGNKEKVAFSIPKEGAGSFYDMMAMP 278
>gi|383311230|ref|YP_005364040.1| spermidine/putrescine-binding periplasmic protein PotD3
[Pasteurella multocida subsp. multocida str. HN06]
gi|386835250|ref|YP_006240567.1| bacterial extracellular solute-binding protein, putative
[Pasteurella multocida subsp. multocida str. 3480]
gi|425064097|ref|ZP_18467222.1| ABC transporter, periplasmic spermidine putrescine-binding protein
PotD [Pasteurella multocida subsp. gallicida X73]
gi|380872502|gb|AFF24869.1| spermidine/putrescine-binding periplasmic protein PotD3
[Pasteurella multocida subsp. multocida str. HN06]
gi|385201953|gb|AFI46808.1| bacterial extracellular solute-binding protein, putative
[Pasteurella multocida subsp. multocida str. 3480]
gi|404381690|gb|EJZ78158.1| ABC transporter, periplasmic spermidine putrescine-binding protein
PotD [Pasteurella multocida subsp. gallicida X73]
Length = 349
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 81/183 (44%), Gaps = 30/183 (16%)
Query: 226 EIDPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREV- 284
E DP+ + ++ PY +G IG + + + I W D W PE G++ + + REV
Sbjct: 120 EFDPQNQ-YSLPYIYGLTGIGLNAEEI---DPSKITSWADLWKPEYKGKVLLTSDAREVF 175
Query: 285 ---IVAGGK-------IAVQQ---NLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDV 331
++ GK + ++Q L L V +F+S + G+V + + W+
Sbjct: 176 HIALLLNGKSPNTTKELEIKQAYEKLVKLMPNVLVFNSDSPEVPYVQGEVALGMIWNGSA 235
Query: 332 LPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGQVRGPSPLIHQWIEFCLQT 391
K SN+ + PK GA W D +AIP ++ V G +Q+I+F L+
Sbjct: 236 YLGNKENSNIQFIYPKEGAIFWMDNYAIPKKAK--------NVEGA----YQFIDFLLRP 283
Query: 392 ARA 394
A
Sbjct: 284 ENA 286
>gi|417851408|ref|ZP_12497153.1| PotD [Pasteurella multocida subsp. gallicida str. Anand1_poultry]
gi|338219480|gb|EGP05129.1| PotD [Pasteurella multocida subsp. gallicida str. Anand1_poultry]
Length = 349
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 81/183 (44%), Gaps = 30/183 (16%)
Query: 226 EIDPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREV- 284
E DP+ + ++ PY +G IG + + + I W D W PE G++ + + REV
Sbjct: 120 EFDPQNQ-YSLPYIYGLTGIGINAEEI---DPSKITSWADLWKPEYKGKVLLTSDAREVF 175
Query: 285 ---IVAGGK-------IAVQQ---NLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDV 331
++ GK + ++Q L L V +F+S + G+V + + W+
Sbjct: 176 HIALLLNGKSPNTTKELEIKQAYEKLVKLMPNVLVFNSDSPEVPYVQGEVALGMIWNGSA 235
Query: 332 LPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGQVRGPSPLIHQWIEFCLQT 391
K SN+ + PK GA W D +AIP ++ V G +Q+I+F L+
Sbjct: 236 YLGNKENSNIQFIYPKEGAIFWMDNYAIPKKAK--------NVEGA----YQFIDFLLRP 283
Query: 392 ARA 394
A
Sbjct: 284 ENA 286
>gi|257483767|ref|ZP_05637808.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas syringae pv. tabaci str. ATCC 11528]
gi|422596916|ref|ZP_16671194.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas syringae pv. lachrymans str. M301315]
gi|422682743|ref|ZP_16741007.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas syringae pv. tabaci str. ATCC 11528]
gi|330987211|gb|EGH85314.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas syringae pv. lachrymans str. M301315]
gi|331012081|gb|EGH92137.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas syringae pv. tabaci str. ATCC 11528]
Length = 364
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 70/163 (42%), Gaps = 27/163 (16%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN-HNLAPIEDWKDPWWPELAGRIS-----MVNSP 281
DP G +A PY WGT IGY K + + I+ W + PE ++S ++S
Sbjct: 120 DP-GNQYAVPYLWGTNGIGYNVEKVKAVLGVDKIDSWAVLFEPENIKKLSSCGVAFLDSA 178
Query: 282 REVIVA--------------GGKIAVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGW 327
E++ A + L + V F S+ Y+ GD+ VA G+
Sbjct: 179 DEMLPAVLNYMGLDPNSTKEADYKKAEAKLMAIRPYVTYFHSSKYITDLANGDICVAAGF 238
Query: 328 SSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIPAASR 364
S DV A R +A +PK G +LW D+ AIPA S+
Sbjct: 239 SGDVFQAKARAEEAGKGVKLAYSIPKEGGNLWFDMLAIPADSK 281
>gi|399519023|ref|ZP_10759831.1| putrescine transport system substrate-binding protein [Pseudomonas
pseudoalcaligenes CECT 5344]
gi|399112847|emb|CCH36389.1| putrescine transport system substrate-binding protein [Pseudomonas
pseudoalcaligenes CECT 5344]
Length = 363
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 80/192 (41%), Gaps = 40/192 (20%)
Query: 226 EIDPRGKIWAAPYRWGTMAIGYKKSKFQN-HNLAPIEDWKDPWWPELAGRIS-----MVN 279
E + G +A PY WGT IGY K + + I+ W + E ++S ++
Sbjct: 116 ETNDPGNQYAVPYLWGTNGIGYNVEKVKAVLGVEEIDSWAVLFEAENIKKLSQCGVAFLD 175
Query: 280 SPREVIVA--------------GGKIAVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAV 325
S E+I A + L + V F S+ Y+ G++ +A
Sbjct: 176 SGDEMIPAMLNYLGLDPNSTNPDDYAKAEAKLLEVRPYVTYFHSSKYIGDLANGNICIAA 235
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPA-ASRLETKQIGGQVRGPS 378
G+S DVL A R +A V+PK GA+LW D+ AIPA A+ +E
Sbjct: 236 GFSGDVLQAADRADEAGKGIEIAYVIPKEGANLWFDMMAIPADAANVEQA---------- 285
Query: 379 PLIHQWIEFCLQ 390
H +I F L+
Sbjct: 286 ---HAFINFLLE 294
>gi|378960182|ref|YP_005217668.1| Putrescine ABC transporter, periplasmic putrescine-binding protein
[Salmonella enterica subsp. enterica serovar Typhi str.
P-stx-12]
gi|374354054|gb|AEZ45815.1| Putrescine ABC transporter, periplasmic putrescine-binding protein
[Salmonella enterica subsp. enterica serovar Typhi str.
P-stx-12]
Length = 371
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 71/165 (43%), Gaps = 29/165 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP K +A PY W T IGY K + + AP+ W PE + +S +++
Sbjct: 125 DPDNK-YAMPYMWATTGIGYNVDKVKAVLGDDAPVNSWDLVLKPENLEKLKSCGVSFLDA 183
Query: 281 PREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAV 325
P E+ A +L L L +R F S+ Y+ GD VA+
Sbjct: 184 PEEIFATVLNYLGKDPNSSKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDTCVAI 243
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
GW+ DV A R N++ +PK G + D++A+PA ++
Sbjct: 244 GWAGDVWQAANRAKEAKNGVNISFSIPKEGVMAFFDVFAMPADAK 288
>gi|127511906|ref|YP_001093103.1| extracellular solute-binding protein [Shewanella loihica PV-4]
gi|126637201|gb|ABO22844.1| extracellular solute-binding protein, family 1 [Shewanella loihica
PV-4]
Length = 366
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 79/164 (48%), Gaps = 28/164 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGRI-----SMVNS 280
DPR + A PY WGT IGY ++K + AP++ + + P+ A +I S+++S
Sbjct: 121 DPRNE-HAVPYLWGTTGIGYNEAKVKQVLGEDAPVDSLELIFNPKYAEKIAKCGFSLLDS 179
Query: 281 PREVI-VAGGKIAVQQN-------------LALLANQVRLFDSTHYLKAFGIGDVWVAVG 326
E++ +A + + N +A + V F S+ Y+ GD+ VA G
Sbjct: 180 ADEMLPMAMIYLGLDPNSTKSEDYAKAGEVMAKIRPFVTYFHSSRYITDLANGDICVAFG 239
Query: 327 WSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIPAASR 364
+S DV A R + +PK G++LW D+ AIPA ++
Sbjct: 240 YSGDVFQAAARAEEAENGNVIGYAIPKEGSNLWFDMLAIPADAK 283
>gi|308186216|ref|YP_003930347.1| spermidine/putrescine-binding periplasmic protein 2 [Pantoea vagans
C9-1]
gi|390433313|ref|ZP_10221851.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Pantoea agglomerans IG1]
gi|308056726|gb|ADO08898.1| Spermidine/putrescine-binding periplasmic protein 2 precursor
[Pantoea vagans C9-1]
Length = 369
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 71/165 (43%), Gaps = 29/165 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP G +A PY WGT IGY K + AP+ W PE + +S +++
Sbjct: 123 DP-GNKYAIPYLWGTTGIGYNIDKVKAALGADAPVNSWDLVLKPENLEKLKSCGVSFLDA 181
Query: 281 PREVIVAG----GKI-----------AVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAV 325
P E+ GK A L L +R F S+ Y+ G++ VA+
Sbjct: 182 PEEIFATVLNYLGKDPNTSDAKEYSGAATDLLLKLRPNIRYFHSSQYINDLANGNICVAI 241
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
GWS D+L A R ++ VPK GA + D+ AIP ++
Sbjct: 242 GWSGDILQAKNRADAAKNGVHLGYSVPKEGALAFFDMMAIPKDAK 286
>gi|424923823|ref|ZP_18347184.1| Spermidine/putrescine-binding periplasmic protein [Pseudomonas
fluorescens R124]
gi|404304983|gb|EJZ58945.1| Spermidine/putrescine-binding periplasmic protein [Pseudomonas
fluorescens R124]
Length = 365
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 84/328 (25%), Positives = 139/328 (42%), Gaps = 54/328 (16%)
Query: 138 LRVVSLQNSVPQSWVKDFMRSQGKRLKF---------QMNLCASIDGIVNNLSTPFNK-L 187
LRV + + + VK F G ++ + + L A G ++ P N L
Sbjct: 28 LRVYNWSDYIAPDTVKKFEDETGIQVTYDVFDSNETLEARLLAGKSGY--DIVVPSNSFL 85
Query: 188 SFAIKKRFIEPIAEAEDQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIGY 247
+ IK +P+ +++ +W K L+ V L++ A + D A PY WG++ IG+
Sbjct: 86 AKQIKAGVYQPLDKSKLSNW-KNLN---PVLLKNAAASDPD---NAHAFPYMWGSIGIGF 138
Query: 248 KKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNSPREVIVAG-----------G 289
+K + AP W + PE A + IS ++SP E+I A
Sbjct: 139 NPAKVKEVLGANAPTNSWDLLFKPENAEKLKACGISFLDSPTEMIPAALHYLGYPVNDKD 198
Query: 290 KIAVQQNLALLAN---QVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSN------ 340
K + + AL V F S+ Y+ G++ VAVG+S DVL A R
Sbjct: 199 KAHILEAEALFMKIRPYVAYFHSSKYISDLANGNICVAVGYSGDVLQAKARAMEAGNKVQ 258
Query: 341 VAVVVPKSGASLWADLWAIP-AASRLETKQIGGQVRGPSPLIHQWIE---FCLQTARALP 396
+ +PK GA + D+ AIP A+ ++ + +I + + + A P
Sbjct: 259 IDYSIPKEGAGSFYDMVAIPRDAANVDNAYLFMNFLMRPDIIAEITNSNGYSNANSAATP 318
Query: 397 FKQEVI---PGASPS-ALESTLVKLPEE 420
E I PG+ PS A+ +TL +P++
Sbjct: 319 LVDEAIRNDPGSYPSQAVMATLYAVPDQ 346
>gi|320353641|ref|YP_004194980.1| family 1 extracellular solute-binding protein [Desulfobulbus
propionicus DSM 2032]
gi|320122143|gb|ADW17689.1| extracellular solute-binding protein family 1 [Desulfobulbus
propionicus DSM 2032]
Length = 350
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 77/187 (41%), Gaps = 39/187 (20%)
Query: 227 IDPR--------GKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMV 278
IDPR G ++ PY WG+ ++ + + D W PEL G++ +
Sbjct: 112 IDPRFTNQSFDPGNGYSVPYMWGSTSLAVNTQVIGGDTVRKMADL---WKPELKGKLLLP 168
Query: 279 NSPREVIVAGGKI--------------AVQQNLALLANQVRLFDSTHYLKAFGIGDVWVA 324
N PREV+ G K+ + L L QVR+FDS +A G+V
Sbjct: 169 NDPREVMGIGLKVLGYSINEKDPEHLRQAFERLQSLMPQVRVFDSDSPKQALLSGEVAAG 228
Query: 325 VGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIP-AASRLETKQIGGQVRGPSPLIHQ 383
+ W+ + A + + P G SLW D + IP A+ +E H+
Sbjct: 229 LVWNGEAYVANNENKAIHYLYPPEGFSLWVDSFCIPKGAAHVEAA-------------HR 275
Query: 384 WIEFCLQ 390
+I++ L+
Sbjct: 276 FIDYVLR 282
>gi|87120811|ref|ZP_01076704.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Marinomonas sp. MED121]
gi|86164039|gb|EAQ65311.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Marinomonas sp. MED121]
Length = 411
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 97/227 (42%), Gaps = 48/227 (21%)
Query: 231 GKIWAAPYRWGTMAIGYK----KSKFQNHNLAPIEDWKDPWWPELAGR-----ISMVNSP 281
G PY WGT+ +GY K++ + P+ W + P +A + +S+++SP
Sbjct: 168 GNKHNVPYTWGTIGLGYNVDMVKARLGD---MPVNSWDLVFDPAIAAKLSDCGVSVLDSP 224
Query: 282 REVI-VAGGKIAVQQN-------------LALLANQVRLFDSTHYLKAFGIGDVWVAVGW 327
EV+ VA + + N ++ F S+ Y+ G++ V++G+
Sbjct: 225 AEVMSVALNYLGLDPNSEKKSDLKKATKLISASRESFTKFSSSQYISDLANGELCVSMGY 284
Query: 328 SSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASRLETKQIGGQVRGPSPLI 381
+ DVL + R N++ ++PK G+ +W DL AIPA + +
Sbjct: 285 NGDVLQSQSRAIEAGQGINISYIIPKEGSLVWFDLMAIPADAPHKEAA------------ 332
Query: 382 HQWIEFCLQTARALPFKQEVIPGASPSALESTLVKLPEELLKGKPSV 428
H++I+F LQ A + +E L+ E +K PS+
Sbjct: 333 HKFIDFILQPENAAGVSNYAFYAVPNNKVEPYLL----EEVKNDPSI 375
>gi|440757617|ref|ZP_20936800.1| Putrescine ABC transporter putrescine-binding protein PotF [Pantoea
agglomerans 299R]
gi|436428606|gb|ELP26260.1| Putrescine ABC transporter putrescine-binding protein PotF [Pantoea
agglomerans 299R]
Length = 369
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 71/165 (43%), Gaps = 29/165 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP G +A PY WGT IGY K + AP+ W PE + +S +++
Sbjct: 123 DP-GNKYAIPYLWGTTGIGYNIDKVKAALGADAPVNSWDLVLKPENLEKLKSCGVSFLDA 181
Query: 281 PREVIVAG----GKI-----------AVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAV 325
P E+ GK A L L +R F S+ Y+ G++ VA+
Sbjct: 182 PEEIFATVLNYLGKDPNSSDAKEYSGAATDLLLKLRPNIRYFHSSQYINDLANGNICVAI 241
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
GWS D+L A R ++ VPK GA + D+ AIP ++
Sbjct: 242 GWSGDILQAKNRADAAKNGVHLGYSVPKEGALAFFDMMAIPKDAK 286
>gi|304397032|ref|ZP_07378911.1| extracellular solute-binding protein family 1 [Pantoea sp. aB]
gi|304355181|gb|EFM19549.1| extracellular solute-binding protein family 1 [Pantoea sp. aB]
Length = 369
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 71/165 (43%), Gaps = 29/165 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP G +A PY WGT IGY K + AP+ W PE + +S +++
Sbjct: 123 DP-GNKYAIPYLWGTTGIGYNIDKVKAALGADAPVNSWDLVLKPENLEKLKSCGVSFLDA 181
Query: 281 PREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAV 325
P E+ A +L L L +R F S+ Y+ G++ VA+
Sbjct: 182 PEEIFATVLNYLGKDPNSSDAKDYSGAATDLLLKLRPNIRYFHSSQYINDLANGNICVAI 241
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
GWS D+L A R ++ VPK GA + D+ AIP ++
Sbjct: 242 GWSGDILQAKNRADAAKNGVHLGYSVPKEGALAFFDMMAIPKDAK 286
>gi|425066266|ref|ZP_18469386.1| ABC transporter, periplasmic spermidine putrescine-binding protein
PotD [Pasteurella multocida subsp. gallicida P1059]
gi|404381851|gb|EJZ78316.1| ABC transporter, periplasmic spermidine putrescine-binding protein
PotD [Pasteurella multocida subsp. gallicida P1059]
Length = 349
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 81/183 (44%), Gaps = 30/183 (16%)
Query: 226 EIDPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREV- 284
E DP+ + ++ PY +G IG + + + I W D W PE G++ + + REV
Sbjct: 120 EFDPQNQ-YSLPYIYGLTGIGINAEEI---DPSKITSWADLWKPEYKGKVLLTSDAREVF 175
Query: 285 ---IVAGGK-------IAVQQ---NLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDV 331
++ GK + ++Q L L V +F+S + G+V + + W+
Sbjct: 176 HIALLLNGKSPNTTKELEIKQAYEKLVKLMPNVLVFNSDSPEVPYVQGEVALGMIWNGSA 235
Query: 332 LPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGQVRGPSPLIHQWIEFCLQT 391
K SN+ + PK GA W D +AIP + K I G +Q+I+F L+
Sbjct: 236 YLGNKENSNIQFIYPKEGAIFWMDNYAIPKKA----KNIEGA--------YQFIDFLLRP 283
Query: 392 ARA 394
A
Sbjct: 284 ENA 286
>gi|289626089|ref|ZP_06459043.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas syringae pv. aesculi str. NCPPB 3681]
gi|289651117|ref|ZP_06482460.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas syringae pv. aesculi str. 2250]
gi|422584131|ref|ZP_16659245.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas syringae pv. aesculi str. 0893_23]
gi|330868952|gb|EGH03661.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas syringae pv. aesculi str. 0893_23]
Length = 364
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 70/163 (42%), Gaps = 27/163 (16%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN-HNLAPIEDWKDPWWPELAGRIS-----MVNSP 281
DP G +A PY WGT IGY K + + I+ W + PE ++S ++S
Sbjct: 120 DP-GNQYAVPYLWGTNGIGYNVEKVKAVLGVDKIDSWAVLFEPENIKKLSSCGVAFLDSA 178
Query: 282 REVIVA--------------GGKIAVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGW 327
E++ A + L + V F S+ Y+ GD+ VA G+
Sbjct: 179 DEMLPAVLNYMGLDPNSTKEADYKKAEAKLMAIRPYVTYFHSSKYITDLANGDICVAAGF 238
Query: 328 SSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIPAASR 364
S DV A R +A +PK G +LW D+ AIPA S+
Sbjct: 239 SGDVFQAKARAEEAGKGVKLAYSIPKEGGNLWFDMLAIPADSK 281
>gi|387896228|ref|YP_006326525.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas fluorescens A506]
gi|387164086|gb|AFJ59285.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas fluorescens A506]
Length = 364
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 70/159 (44%), Gaps = 27/159 (16%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN-HNLAPIEDWKDPWWPELAGR-----ISMVNSP 281
DP G +A PY WGT IGY K + + I+ W + PE + +S ++S
Sbjct: 120 DP-GNQYAVPYLWGTNGIGYNVDKVKEVLGVDKIDSWAVLFEPENMKKLATCGVSFMDSA 178
Query: 282 REVIVA--------------GGKIAVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGW 327
E++ A ++ L + V F S+ Y+ G++ VA G+
Sbjct: 179 DEMLPAVLNYMGLDPNSTNPADYKKAEEKLLKVRPYVTYFHSSKYISDLANGNICVAAGF 238
Query: 328 SSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIP 360
S DV A R + N+A +PK G +LW D+ AIP
Sbjct: 239 SGDVFQAKARAAEAGKGVNIAYTIPKEGGNLWFDVLAIP 277
>gi|421253999|ref|ZP_15709011.1| PotD, partial [Pasteurella multocida subsp. multocida str.
Anand1_buffalo]
gi|401693164|gb|EJS87362.1| PotD, partial [Pasteurella multocida subsp. multocida str.
Anand1_buffalo]
Length = 329
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 118/280 (42%), Gaps = 46/280 (16%)
Query: 138 LRVVSLQNSVPQSWVKDFMRSQGKRL---KFQMN--LCASIDGIVNN----LSTPFNKLS 188
L V + + +P S + DF + G + F+ N + A + + N L P S
Sbjct: 10 LYVYNWTDYIPSSLIADFTKETGIEVIYSTFESNEEMYAKLKLLSKNSGYDLVFP---SS 66
Query: 189 FAIKKRFIEPIAEAEDQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIGYK 248
+ I K + + + D L H+ +L + E DP+ + ++ PY +G IG
Sbjct: 67 YYINKMVKDGMLQKLDHAKLTNL-HQIPTHLLNK---EFDPQNQ-YSLPYIYGLTGIGIN 121
Query: 249 KSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREV----IVAGGK-------IAVQQ-- 295
+ + + I W D W PE G++ + + REV ++ GK + ++Q
Sbjct: 122 AEEI---DPSKITSWADLWKPEYKGKVLLTSDAREVFHIALLLNGKSPNTTKELEIKQAY 178
Query: 296 -NLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWA 354
L L V +F+S + G+V + + W+ K SN+ + PK GA W
Sbjct: 179 EKLVKLMPNVLVFNSDSPEVPYVQGEVALGMIWNGSAYLGNKENSNIQFIYPKEGAIFWM 238
Query: 355 DLWAIPAASRLETKQIGGQVRGPSPLIHQWIEFCLQTARA 394
D +AIP ++ V G +Q+I+F L+ A
Sbjct: 239 DNYAIPKKAK--------NVEGA----YQFIDFLLRPENA 266
>gi|431802646|ref|YP_007229549.1| extracellular solute-binding protein [Pseudomonas putida HB3267]
gi|430793411|gb|AGA73606.1| extracellular solute-binding protein [Pseudomonas putida HB3267]
Length = 362
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 68/159 (42%), Gaps = 27/159 (16%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQNH-NLAPIEDWKDPWWPELAGR-----ISMVNSP 281
DP G +A PY WGT IGY K + + I+ W + PE + ++ ++SP
Sbjct: 118 DP-GNQYAVPYLWGTNGIGYNIDKVKAALGVDHIDSWAVLFEPENLKKLKQCGVAFMDSP 176
Query: 282 REVIVA--------------GGKIAVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGW 327
E+ A + L L + F S+ Y+ G+V VA G+
Sbjct: 177 DELFPAVLNYLGMDPRSEKPADYAKAEARLLELRPYITYFHSSKYVSDLANGNVCVAFGY 236
Query: 328 SSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIP 360
S DV A R +A +PK G++LW DL AIP
Sbjct: 237 SGDVFQAANRAVEAKNGLKIAYSIPKEGSNLWFDLLAIP 275
>gi|237802234|ref|ZP_04590695.1| putrescine ABC transporter periplasmic putrescine-binding protein,
partial [Pseudomonas syringae pv. oryzae str. 1_6]
gi|331025091|gb|EGI05147.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas syringae pv. oryzae str. 1_6]
Length = 342
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 70/164 (42%), Gaps = 29/164 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN-HNLAPIEDWKDPWWPELAGRIS---------- 276
DP G +A PY WGT IGY K + + I+ W + PE ++S
Sbjct: 123 DP-GNQYAVPYLWGTNGIGYNVDKVKAVLGVDKIDSWSVLFEPENIKKLSSCGVAFLDSA 181
Query: 277 ------MVN----SPREVIVAGGKIAVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVG 326
M+N P A K A + L + V F S+ Y+ GD+ VA G
Sbjct: 182 DEMLPAMLNYLGLDPNSTKEADYKKA-EAKLMAIRPYVTYFHSSKYITDLANGDICVAAG 240
Query: 327 WSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIPAASR 364
+S DV A R +A +PK G +LW D+ AIPA S+
Sbjct: 241 FSGDVFQAKARAEEAGKGVKLAYSIPKEGGNLWFDMLAIPADSQ 284
>gi|378775234|ref|YP_005177477.1| spermidine/putrescine-binding periplasmic protein PotD3
[Pasteurella multocida 36950]
gi|421264132|ref|ZP_15715137.1| PotD [Pasteurella multocida subsp. multocida str. P52VAC]
gi|356597782|gb|AET16508.1| spermidine/putrescine-binding periplasmic protein PotD3
[Pasteurella multocida 36950]
gi|401688597|gb|EJS84160.1| PotD [Pasteurella multocida subsp. multocida str. P52VAC]
Length = 349
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 81/183 (44%), Gaps = 30/183 (16%)
Query: 226 EIDPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREV- 284
E DP+ + ++ PY +G IG + + + I W D W PE G++ + + REV
Sbjct: 120 EFDPQNQ-YSLPYIYGLTGIGINAEEI---DPSKITSWADLWKPEYKGKVLLTSDAREVF 175
Query: 285 ---IVAGGK-------IAVQQ---NLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDV 331
++ GK + ++Q L L V +F+S + G+V + + W+
Sbjct: 176 HIALLLNGKSPNTTKELEIKQAYEKLVKLMPNVLVFNSDSPEVPYVQGEVALGMIWNGSA 235
Query: 332 LPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGQVRGPSPLIHQWIEFCLQT 391
K SN+ + PK GA W D +AIP ++ V G +Q+I+F L+
Sbjct: 236 YLGNKENSNIQFIYPKEGAIFWMDNYAIPKKAK--------NVEGA----YQFIDFLLRP 283
Query: 392 ARA 394
A
Sbjct: 284 ENA 286
>gi|329767050|ref|ZP_08258578.1| hypothetical protein HMPREF0428_00275 [Gemella haemolysans M341]
gi|328837775|gb|EGF87400.1| hypothetical protein HMPREF0428_00275 [Gemella haemolysans M341]
Length = 359
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 84/208 (40%), Gaps = 32/208 (15%)
Query: 227 IDPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVI- 285
DP + ++ PY WGT+ + Y K+K E W D W LA I +++ RE++
Sbjct: 125 FDPNNE-FSIPYFWGTLGVLYNKTKVPED--LKFEKWNDLWDTRLANNILLIDGAREMMG 181
Query: 286 ----VAGGKI----AVQQNLA-----LLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVL 332
G + V NLA LL V+ ++ + W +V +S D
Sbjct: 182 IALQSEGNSVNDTNEVNLNLAERKLELLHPNVKAINADEKKMLMINNEAWASVVFSGDAK 241
Query: 333 PAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGQVRGPSPLIHQWIEFCLQTA 392
+ N+ +PK G +LW D IP S+ E +++I F L+
Sbjct: 242 AIMGENENMVYALPKEGTNLWFDNIVIPKTSKNEEAA------------YKFINFMLKPE 289
Query: 393 RALPFKQEVIPGASPSALESTLVKLPEE 420
A E I A+P+ L LPEE
Sbjct: 290 NAAK-NSEFIGYATPNTKAKEL--LPEE 314
>gi|429330947|ref|ZP_19211721.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas putida CSV86]
gi|428764274|gb|EKX86415.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas putida CSV86]
Length = 364
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 68/159 (42%), Gaps = 27/159 (16%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN-HNLAPIEDWKDPWWPELAGRIS-----MVNSP 281
DP G +A PY WGT IGY K + I+ W + PE ++S ++S
Sbjct: 120 DP-GNQYAVPYLWGTNGIGYNVEKVKAVLGTDKIDSWATLFEPENIKKLSSCGVAFLDSA 178
Query: 282 REVIVA--------------GGKIAVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGW 327
E++ A + L + V F S+ Y+ GD+ VA G+
Sbjct: 179 DEMLPAMLNYLGLDPNSQDPKDYKKAEDKLLAIRPYVTYFHSSKYISDLANGDICVAAGF 238
Query: 328 SSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIP 360
S DV A R +VA V+PK G +LW D+ AIP
Sbjct: 239 SGDVFQAKARAEEAGKGVDVAYVIPKEGGNLWFDMLAIP 277
>gi|425738066|ref|ZP_18856334.1| spermidine/putrescine ABC transporter spermidine/putrescine-binding
protein [Staphylococcus massiliensis S46]
gi|425480551|gb|EKU47716.1| spermidine/putrescine ABC transporter spermidine/putrescine-binding
protein [Staphylococcus massiliensis S46]
Length = 357
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 82/197 (41%), Gaps = 32/197 (16%)
Query: 211 LSHKWKVYLRSNDAGEID---PRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPW 267
L+H +L++ D+ ++ +G +A PY +GT+ I Y K K+ + W D
Sbjct: 106 LNHDKLKHLKNIDSNYMNMSFDKGNRYAVPYFFGTVGILYDKDKYSD---MTFNSWNDLL 162
Query: 268 WPELAGRISMVNSPREVIVAGGKI--------------AVQQNLALLANQVRLFDSTHYL 313
P+L I +V+S RE++ + Q LA LA V+
Sbjct: 163 KPQLKQDILLVDSAREIVGIALNMNHDSLNTTDPEKLKEAQLKLAKLAPNVKGVVGDELP 222
Query: 314 KAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGQ 373
+ VAV WS +P V VVP+ G++LW D IP S+
Sbjct: 223 LMLEQQEAHVAVVWSGVAMPIVTENDTYQYVVPQEGSNLWFDNMVIPKTSQ--------N 274
Query: 374 VRGPSPLIHQWIEFCLQ 390
V G H++I+F L+
Sbjct: 275 VDGA----HRFIDFLLR 287
>gi|409425581|ref|ZP_11260166.1| extracellular solute-binding protein [Pseudomonas sp. HYS]
Length = 359
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 70/163 (42%), Gaps = 27/163 (16%)
Query: 226 EIDPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGRIS------M 277
E++ G + PY WG+ IGY K + + AP++ W + PE ++ +
Sbjct: 111 EVNDPGNQYGFPYLWGSTGIGYNIDKVKAVLGDNAPVDSWDLIFKPEYISKLKSCGVAVL 170
Query: 278 VNSPREVIVAGGKIAV-------------QQNLALLANQVRLFDSTHYLKAFGIGDVWVA 324
N P + +A + + +Q L + + F S+ Y GD+ V
Sbjct: 171 DNGPELLPIALNYLGLAHHSQDPKDYDKAKQLLMTVRPYISYFHSSKYTGDLANGDICVV 230
Query: 325 VGWSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIPA 361
VG+S DVL A R V +PK GA +W D+ A+PA
Sbjct: 231 VGFSGDVLQAKNRAEEAKNGVKVGYSIPKEGAPMWFDMVAMPA 273
>gi|418613820|ref|ZP_13176818.1| ABC transporter, solute-binding protein [Staphylococcus epidermidis
VCU118]
gi|420198916|ref|ZP_14704600.1| putative spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD
[Staphylococcus epidermidis NIHLM031]
gi|374822486|gb|EHR86507.1| ABC transporter, solute-binding protein [Staphylococcus epidermidis
VCU118]
gi|394272602|gb|EJE17052.1| putative spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD
[Staphylococcus epidermidis NIHLM031]
Length = 357
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 68/151 (45%), Gaps = 18/151 (11%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVIVA 287
DP + ++ PY +GT+ I Y K K+ N + W D + +L I +V+ RE+I
Sbjct: 127 DPNNR-YSIPYFFGTVGILYDKEKYPNETF---DSWGDLYHSQLKNDILLVDGAREIIGM 182
Query: 288 G-GKIA-------------VQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLP 333
G K+ +++L LA QVR + VAV WS P
Sbjct: 183 GLNKLGYSLNDKNPTHIHQAEKDLHNLAPQVRGIVGDEITMMLQQNEGHVAVVWSGVAAP 242
Query: 334 AVKRMSNVAVVVPKSGASLWADLWAIPAASR 364
V+ ++ V+PK G++LW D IP ++
Sbjct: 243 LVQENTHYNYVIPKEGSNLWFDNMVIPKTAQ 273
>gi|295096449|emb|CBK85539.1| Spermidine/putrescine-binding periplasmic protein [Enterobacter
cloacae subsp. cloacae NCTC 9394]
Length = 370
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 79/186 (42%), Gaps = 33/186 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAP---IEDWKDPWWPELAGR-----ISMVN 279
DP K +A PY W T IGY K + L P ++ W PE + +S ++
Sbjct: 124 DPENK-YAMPYLWATTGIGYNVDKVKAA-LGPDVKLDSWDVVLKPENLEKLKSCGVSFLD 181
Query: 280 SPREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVA 324
+P E+ A +L L L +R F S+ Y+ GD+ VA
Sbjct: 182 APEEIFATVLNYLGKDPNSSKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVA 241
Query: 325 VGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIP--AASRLETKQIGGQVRG 376
+GW+ DV A R NV+ +PK GA + D++A+P A ++ E Q +
Sbjct: 242 IGWAGDVWQAANRAKEAKNGVNVSYFIPKEGALAFFDVFAMPADAKNKEEAYQFLNYLMR 301
Query: 377 PSPLIH 382
P + H
Sbjct: 302 PEVIAH 307
>gi|376297850|ref|YP_005169080.1| extracellular solute-binding protein [Desulfovibrio desulfuricans
ND132]
gi|323460412|gb|EGB16277.1| extracellular solute-binding protein family 1 [Desulfovibrio
desulfuricans ND132]
Length = 344
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 60/145 (41%), Gaps = 17/145 (11%)
Query: 234 WAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVIVAGGKI-- 291
++ PY WG+ AI + + + D W PE+ R+ + N PREV K
Sbjct: 120 FSVPYMWGSTAIAVNTGTLGE---SAVTSYADLWKPEMKDRLLLPNDPREVFAIALKSLG 176
Query: 292 ------------AVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS 339
+ L L VR+FDS +A G+V V V W+ + A +
Sbjct: 177 YSLNDTDPAHLKQAYEKLKGLMPYVRVFDSDSPKQALLSGEVAVGVIWNGEAYVANQENP 236
Query: 340 NVAVVVPKSGASLWADLWAIPAASR 364
+ V PK G SLW D IP ++
Sbjct: 237 EIKYVYPKEGFSLWMDSLCIPKGAK 261
>gi|428311756|ref|YP_007122733.1| spermidine/putrescine-binding periplasmic protein [Microcoleus sp.
PCC 7113]
gi|428253368|gb|AFZ19327.1| spermidine/putrescine-binding periplasmic protein [Microcoleus sp.
PCC 7113]
Length = 378
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 80/179 (44%), Gaps = 33/179 (18%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPW--WPELAGRISMVNSPREVI 285
DP G ++ P WGT + Y K + AP EDW W +L+ R++++N REV+
Sbjct: 149 DP-GNQYSVPVSWGTTGLIYNPKKLKQ---AP-EDWSYLWENQQQLSKRMTLLNDVREVM 203
Query: 286 VAGGKI--------------AVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDV 331
A K+ Q L L + + F S + GD+ VA+ +S+D
Sbjct: 204 GATLKMLGYSYNSTDPQHIQQAYQKLMDLKSNLASFTSDAWRPQVLSGDLSVAMCYSADA 263
Query: 332 LPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGQVRGPSPLIHQWIEFCLQ 390
+ ++ VVPKSG+SLW D AIP ++ V G + WI F LQ
Sbjct: 264 NEVMGENESLEYVVPKSGSSLWMDTLAIPKSA--------PNVEG----AYAWINFMLQ 310
>gi|149913022|ref|ZP_01901556.1| hypothetical protein RAZWK3B_03500 [Roseobacter sp. AzwK-3b]
gi|149813428|gb|EDM73254.1| hypothetical protein RAZWK3B_03500 [Roseobacter sp. AzwK-3b]
Length = 361
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 80/184 (43%), Gaps = 30/184 (16%)
Query: 204 DQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIE 261
D+ L + W V L + DP G +A Y WGT +G K AP+
Sbjct: 94 DKSKLPNLENMWSVVLER--TAKYDP-GHEYAINYMWGTTGLGVNVGKVTELLGEDAPMN 150
Query: 262 DWKDPWWPELAGRIS-----MVNSPREVIVAG-------------GKIA-VQQNLALLAN 302
W + PE +++ +++P E+I A IA V++ +
Sbjct: 151 SWALVFEPENMEKLAECGVHFLDAPAEMIPAALNYIGEDPDSHDPDVIAKVEEVYMGIRP 210
Query: 303 QVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS----NVAVV--VPKSGASLWADL 356
++ F S+ Y+ A GD+ VAVGWS D+L A R + V ++ PK GA +W D
Sbjct: 211 HIQKFHSSEYINALANGDICVAVGWSGDILQARDRAAEADNGVEIIYNAPKEGAQMWFDQ 270
Query: 357 WAIP 360
AIP
Sbjct: 271 MAIP 274
>gi|71733632|ref|YP_276985.1| spermidine/putrescine ABC transporter substrate-binding protein
[Pseudomonas syringae pv. phaseolicola 1448A]
gi|71554185|gb|AAZ33396.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas syringae pv. phaseolicola 1448A]
Length = 364
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 70/163 (42%), Gaps = 27/163 (16%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN-HNLAPIEDWKDPWWPELAGRIS-----MVNSP 281
DP G +A PY WGT IGY K + + I+ W + PE ++S ++S
Sbjct: 120 DP-GNQYAVPYLWGTNGIGYNVEKVKAVLGVDKIDSWAVLFEPENIKKLSSCGVAFLDSA 178
Query: 282 REVIVA--------------GGKIAVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGW 327
E++ A + L + V F S+ Y+ GD+ VA G+
Sbjct: 179 DEMLPAVLNYMGLDPNSTKEADYKKAEAKLLAIRPYVTYFHSSKYITDLANGDICVAAGF 238
Query: 328 SSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIPAASR 364
S DV A R +A +PK G +LW D+ AIPA S+
Sbjct: 239 SGDVFQAKARAEEAGKGVKLAYSIPKEGGNLWFDMLAIPADSK 281
>gi|325272990|ref|ZP_08139306.1| extracellular solute-binding protein [Pseudomonas sp. TJI-51]
gi|324101884|gb|EGB99414.1| extracellular solute-binding protein [Pseudomonas sp. TJI-51]
Length = 362
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 68/159 (42%), Gaps = 27/159 (16%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQNH-NLAPIEDWKDPWWPELAGR-----ISMVNSP 281
DP G +A PY WGT IGY K + + I+ W + PE + ++ ++SP
Sbjct: 118 DP-GNQYAVPYLWGTNGIGYNVEKVKAALGVDRIDSWAVLFEPENLKKLKQCGVAFMDSP 176
Query: 282 REVIVA--------------GGKIAVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGW 327
E+ A + L L + F S+ Y+ G++ VA G+
Sbjct: 177 DELFPAVLNYLGMDPRSEQPADYAKAEARLLELRPYITYFHSSKYVSDLANGNICVAFGY 236
Query: 328 SSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIP 360
S DV A R VA +PK G++LW DL AIP
Sbjct: 237 SGDVFQAANRAVEAKNGVKVAYSIPKEGSNLWFDLLAIP 275
>gi|226314011|ref|YP_002773907.1| spermidine/putrescine ABC transporter substrate-binding protein
[Brevibacillus brevis NBRC 100599]
gi|226096961|dbj|BAH45403.1| spermidine/putrescine ABC transporter substrate binding protein
[Brevibacillus brevis NBRC 100599]
Length = 351
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 62/141 (43%), Gaps = 18/141 (12%)
Query: 238 YRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREV----IVAGG---- 289
Y WG I Y K + + W D W GR+ M+N PREV ++ G
Sbjct: 133 YTWGITGIAYNKKYVKETPTS----WNDLWNEAYKGRVIMLNDPREVMGMALIKNGFSNS 188
Query: 290 ---KIAVQQNLALLAN---QVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAV 343
K ++++ A L V FD+ + + + W+ WS D + +V
Sbjct: 189 TTNKEELEKSFADLKKVVPNVVAFDTDNIKQKMIAEEAWIGTVWSGDAAFIHAQNPDVEY 248
Query: 344 VVPKSGASLWADLWAIPAASR 364
V+PK GA++WAD AIP ++
Sbjct: 249 VIPKEGATIWADTMAIPKGAK 269
>gi|289434072|ref|YP_003463944.1| spermidine/putrescine ABC transporter binding protein [Listeria
seeligeri serovar 1/2b str. SLCC3954]
gi|289170316|emb|CBH26856.1| spermidine/putrescine ABC transporter, binding protein [Listeria
seeligeri serovar 1/2b str. SLCC3954]
Length = 357
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 91/203 (44%), Gaps = 34/203 (16%)
Query: 234 WAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVIVAG----G 289
++ PY WGT+ I Y K F + N + W + P+L +I +++ REV+ G G
Sbjct: 132 YSMPYFWGTLGIIYNKVMFPDKNF---DTWDALFDPDLKNQILLIDGAREVMGLGLNSLG 188
Query: 290 KIAVQQNLA-LLANQVRLFDSTHYLKAFGIGD----------VWVAVGWSSDVLPAVKRM 338
N A L+ + +L T +KA +GD VAV +S + +
Sbjct: 189 YSLNDTNKAHLMEARDKLETMTPNVKAI-VGDEIKLLMADNEAGVAVTFSGEAAEMLSEN 247
Query: 339 SNVAVVVPKSGASLWADLWAIPAASRLETKQIGGQVRGPSPLIHQWIEFCLQTARALPFK 398
++ V+PK G++LW D IP + K + G H++I F L+ A
Sbjct: 248 EDLEYVIPKDGSNLWFDNMVIPKTA----KNVDGA--------HKFINFMLKPENA-AIN 294
Query: 399 QEVIPGASPSALESTLVKLPEEL 421
E + A+P+ E + LP+E+
Sbjct: 295 AEYVGYATPN--EKAVKLLPKEI 315
>gi|408378346|ref|ZP_11175943.1| putrescine ABC transporter substrate-binding protein [Agrobacterium
albertimagni AOL15]
gi|407747483|gb|EKF59002.1| putrescine ABC transporter substrate-binding protein [Agrobacterium
albertimagni AOL15]
Length = 366
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 74/169 (43%), Gaps = 38/169 (22%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQNHNLA--PIEDWKDPWWPELAGR-----ISMVNS 280
DP G +A Y WGT IGY +K + A ++ W + PE A + ++++++
Sbjct: 121 DP-GNEYAVNYMWGTTGIGYNVAKVKEALGADFTVDSWDAIFKPENAEKLKSCGVNILDA 179
Query: 281 PREVIV-------------------AGGKIAVQQNLALLANQVRLFDSTHYLKAFGIGDV 321
E AGG++ + + VR F+S+ Y+ GD+
Sbjct: 180 SDETFAIAMNYIGKDPDSKESADLEAGGEVYMN-----IRPSVRTFNSSAYIDDLANGDI 234
Query: 322 WVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
+ +GWS D+L A R + V+PK G +W D AIPA ++
Sbjct: 235 CMTIGWSGDILQAKARAEEANNGVEINYVIPKEGTYMWFDNMAIPADAK 283
>gi|422620565|ref|ZP_16689242.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas syringae pv. japonica str. M301072]
gi|330900922|gb|EGH32341.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas syringae pv. japonica str. M301072]
Length = 364
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 69/163 (42%), Gaps = 27/163 (16%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQNH-NLAPIEDWKDPWWPELAGRIS-----MVNSP 281
DP G +A PY WGT IGY K + + I+ W + PE ++S ++S
Sbjct: 120 DP-GNQYAVPYLWGTNGIGYNVEKVKAALGVDKIDSWAVLFEPENIKKLSSCGVAFLDSA 178
Query: 282 REVIVA--------------GGKIAVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGW 327
E++ A + L + V F S Y+ GD+ VA G+
Sbjct: 179 DEMLPAVLNYMGLDPNSTKEADYKKAEAKLLAIRPYVTYFHSAKYITDLANGDICVAAGF 238
Query: 328 SSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIPAASR 364
S DV A R +A +PK G +LW D+ AIPA S+
Sbjct: 239 SGDVFQAKARAEEAGKGVKLAYSIPKEGGNLWFDMLAIPADSK 281
>gi|424898361|ref|ZP_18321935.1| spermidine/putrescine-binding periplasmic protein [Rhizobium
leguminosarum bv. trifolii WSM2297]
gi|393182588|gb|EJC82627.1| spermidine/putrescine-binding periplasmic protein [Rhizobium
leguminosarum bv. trifolii WSM2297]
Length = 365
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 84/187 (44%), Gaps = 35/187 (18%)
Query: 204 DQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIGY---KKSKFQNHNLAP- 259
D+ LS+ W V + E DP G A Y WGT IGY K ++ ++ P
Sbjct: 99 DKSKLPNLSNMWDVIQQR--TAEYDP-GNEHAVDYMWGTDGIGYNVKKVAEILGPDVKPG 155
Query: 260 IEDWKDPWWPELAGR-----ISMVNSPREVIVAGGKI--------------AVQQNLALL 300
+E DP ++A + I ++++P++VI + ++ L +
Sbjct: 156 LEVIFDP---KVAAKFKDCGIYVLDTPKDVITTAFRYLGLDPNSTKAEDFKKAEELLTAV 212
Query: 301 ANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWA 354
+R F S+ Y+ A GD+ +A G+S D+L A R + V VP GA +W
Sbjct: 213 RPNIRKFHSSEYINALANGDICIAFGYSGDMLQARDRAAEAKNGVEVNYSVPPQGAQMWF 272
Query: 355 DLWAIPA 361
D+ AIPA
Sbjct: 273 DMMAIPA 279
>gi|114564172|ref|YP_751686.1| extracellular solute-binding protein [Shewanella frigidimarina
NCIMB 400]
gi|114335465|gb|ABI72847.1| extracellular solute-binding protein, family 1 [Shewanella
frigidimarina NCIMB 400]
Length = 366
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 96/222 (43%), Gaps = 45/222 (20%)
Query: 235 AAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGRI-----SMVNS-----PR 282
A PY WGT IGY K + AP + + + P+ A +I SM++S P+
Sbjct: 127 AIPYLWGTNGIGYNIEKVKAVLGEDAPFDSLELIFNPKYAEKIGSCGFSMLDSADDMLPQ 186
Query: 283 EVIVAG-----GKIAVQQNLALLANQVR----LFDSTHYLKAFGIGDVWVAVGWSSDVLP 333
+I G A + A + +VR F S+ Y+ GD+ VA G+S DV
Sbjct: 187 ALIYLGLDPNSKNAADYEKAAEVLEKVRPYVTYFHSSRYISDLANGDICVAFGFSGDVFQ 246
Query: 334 AVKRM------SNVAVVVPKSGASLWADLWAIPA-ASRLETKQIGGQVRGPSPLIHQWIE 386
A R + + +PK GA+LW D+ AIP A+ ++ H+ I
Sbjct: 247 AAARADEAGNGNKIGYSIPKEGANLWFDMLAIPQDATNVDNA-------------HKLIN 293
Query: 387 FCLQTARALPFKQEVIPGASPSALESTLVKLPEELLKGKPSV 428
+ L+ P V A+P+A LV +E ++ P++
Sbjct: 294 YLLRPEVIAPISNYV-AYANPNAPAQALV---DEAIRNDPAI 331
>gi|417209667|ref|ZP_12020951.1| putrescine-binding periplasmic protein [Escherichia coli JB1-95]
gi|419202092|ref|ZP_13745314.1| potF [Escherichia coli DEC8B]
gi|378055736|gb|EHW17997.1| potF [Escherichia coli DEC8B]
gi|386196292|gb|EIH90518.1| putrescine-binding periplasmic protein [Escherichia coli JB1-95]
Length = 370
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 72/165 (43%), Gaps = 29/165 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP K +A PY W T IGY K + AP++ W PE + +S +++
Sbjct: 124 DPDNK-FAMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDA 182
Query: 281 PREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAV 325
P E A +L L L +R F S+ Y+ GD+ VA+
Sbjct: 183 PEEGFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 242
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 243 GWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|427716541|ref|YP_007064535.1| extracellular solute-binding protein [Calothrix sp. PCC 7507]
gi|427348977|gb|AFY31701.1| extracellular solute-binding protein family 1 [Calothrix sp. PCC
7507]
Length = 361
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 94/210 (44%), Gaps = 36/210 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWW--PELAGRISMVNSPREVI 285
DP + ++ P+ WGT + Y +N AP EDW W +L R++++N REV+
Sbjct: 133 DPNNR-YSIPFNWGTTGLLYNSEIIKN---AP-EDWDYLWQNQTQLHKRMTLLNDVREVM 187
Query: 286 VAGGKI--------------AVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDV 331
A ++ + L +L + FD+ + GD+ +A+ +S+D
Sbjct: 188 GATLRMLGYSYNSKDENQIKQAYEKLKVLKPAIAAFDTDAWQNQILAGDLVLAMCYSADA 247
Query: 332 LPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGQVRGPSPLIHQWIEFCLQT 391
+ K ++ V+P+SG+SLW D IP + + G + WI F LQ
Sbjct: 248 IRVSKENPHLKYVIPRSGSSLWTDTIIIPKTA----PNLDG--------AYAWINFILQP 295
Query: 392 ARALPFKQEVIPGASPSALESTLVKLPEEL 421
A Q + A+P+ S +LP+++
Sbjct: 296 EVAAQVSQR-LSVATPN--RSGFEQLPKQI 322
>gi|334122697|ref|ZP_08496733.1| putrescine ABC superfamily ATP binding cassette transporter,
binding protein [Enterobacter hormaechei ATCC 49162]
gi|333391812|gb|EGK62921.1| putrescine ABC superfamily ATP binding cassette transporter,
binding protein [Enterobacter hormaechei ATCC 49162]
Length = 370
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 73/166 (43%), Gaps = 31/166 (18%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAP---IEDWKDPWWPELAGR-----ISMVN 279
DP K +A PY W T IGY K + L P ++ W PE + +S ++
Sbjct: 124 DPENK-YAMPYLWATTGIGYNVDKVKAA-LGPDVKLDSWDVVLKPENLEKLKSCGVSFLD 181
Query: 280 SPREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVA 324
+P E+ A +L L L +R F S+ Y+ GD+ VA
Sbjct: 182 APEEIFATVLNYLGKDPNSSKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVA 241
Query: 325 VGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
+GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 242 IGWAGDVWQAANRAKEAKNGVNVSYFIPKEGALAFFDVFAMPADAK 287
>gi|416022126|ref|ZP_11567366.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas syringae pv. glycinea str. race 4]
gi|422403034|ref|ZP_16480093.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas syringae pv. glycinea str. race 4]
gi|320331741|gb|EFW87679.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas syringae pv. glycinea str. race 4]
gi|330872512|gb|EGH06661.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas syringae pv. glycinea str. race 4]
Length = 364
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 70/163 (42%), Gaps = 27/163 (16%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN-HNLAPIEDWKDPWWPELAGRIS-----MVNSP 281
DP G +A PY WGT IGY K + + I+ W + PE ++S ++S
Sbjct: 120 DP-GNQYAVPYLWGTNGIGYNVEKVKAVLGVDKIDSWAVLFEPENIKKLSSCGVAFLDSA 178
Query: 282 REVIVA--------------GGKIAVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGW 327
E++ A + L + V F S+ Y+ GD+ VA G+
Sbjct: 179 DEMLPAVLNYMGLDPNSTKEADYKKAEAKLLAIRPYVTYFHSSKYITDLANGDICVAAGF 238
Query: 328 SSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIPAASR 364
S DV A R +A +PK G +LW D+ AIPA S+
Sbjct: 239 SGDVFQAKARAEEAGKGVKLAYSIPKEGGNLWFDMLAIPADSK 281
>gi|260429146|ref|ZP_05783123.1| putrescine-binding periplasmic protein [Citreicella sp. SE45]
gi|260419769|gb|EEX13022.1| putrescine-binding periplasmic protein [Citreicella sp. SE45]
Length = 362
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 92/215 (42%), Gaps = 44/215 (20%)
Query: 204 DQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIE 261
D+ + + W V S + DP G +A Y WGT +G ++K + AP+
Sbjct: 95 DKSKLPNIENMWDVI--SERTSKYDP-GNEYAINYMWGTTGLGVNEAKVKEVLGEDAPVT 151
Query: 262 DWKDPWWPELAGRIS-----MVNSPREVIVAG----GKIAVQQNLALLANQ--------- 303
W + E +++ +++P E+I A G+ + ++A
Sbjct: 152 SWDLVFKAENMEKLASCGVMFLDAPSEMIPAALNYIGEDPDSHDPEVIAKAEAVYDPIRP 211
Query: 304 -VRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADL 356
++ F+S+ Y+ A GD+ VAVGWS D+L A R + ++ P GA +W D+
Sbjct: 212 YIQKFNSSEYINALANGDICVAVGWSGDILQARDRAAEADNGVEISYYAPDEGAQMWFDM 271
Query: 357 WAIPAASRLETKQIGGQVRGPSP-LIHQWIEFCLQ 390
AIP V P+P H+++ F +
Sbjct: 272 MAIP-------------VDAPNPDAAHKFLNFIMD 293
>gi|333898570|ref|YP_004472443.1| extracellular solute-binding protein [Pseudomonas fulva 12-X]
gi|333113835|gb|AEF20349.1| extracellular solute-binding protein family 1 [Pseudomonas fulva
12-X]
Length = 366
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 100/230 (43%), Gaps = 44/230 (19%)
Query: 226 EIDPRGKIWAAPYRWGTMAIGY--KKSKFQNHNLAPIEDWKDPWWPELAGR-----ISMV 278
E+ G ++ PY WGT+ IG+ +K K AP++ W + PE + +S +
Sbjct: 118 EVSDPGNKYSFPYMWGTVGIGFNPEKVKAALGENAPVDSWDLLFKPENIEKLKSCGVSFL 177
Query: 279 NSPREVIVAGGKIAVQ---------------QNLALLAN---QVRLFDSTHYLKAFGIGD 320
+SP E++ IA+Q + AL V F S+ Y+ G+
Sbjct: 178 DSPTEIL----PIAMQYLGYEPTSTDPKQLKEAEALFMKIRPSVTYFHSSKYISDLANGN 233
Query: 321 VWVAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIPA-ASRLETKQ-IGG 372
+ VAVG+S D+ A R V+ +PK GA + D+ AIPA A +E+
Sbjct: 234 LCVAVGYSGDIYQAKSRAEEAGGKVKVSYNIPKQGAGAFFDMVAIPADAENVESAHAFLN 293
Query: 373 QVRGPSPL--IHQWIEFCLQTARALPFKQEVI---PGASPSALESTLVKL 417
+ P + I + F A+A P E I PG P+ + T+ KL
Sbjct: 294 FLLKPEIMAEITNEVHFPNGNAKATPLVDEAIRNDPGVYPT--QETMGKL 341
>gi|359781089|ref|ZP_09284314.1| extracellular solute-binding protein [Pseudomonas psychrotolerans
L19]
gi|359371149|gb|EHK71715.1| extracellular solute-binding protein [Pseudomonas psychrotolerans
L19]
Length = 366
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 79/165 (47%), Gaps = 27/165 (16%)
Query: 226 EIDPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMV 278
E++ G + PY +GT+ IG+ +K + AP++ W + PE + ++M+
Sbjct: 118 EVNDPGNQYGVPYMYGTILIGFNPAKVKAALGADAPVDSWDLVFKPENMAKLKSCGVAML 177
Query: 279 NSPREVI-VAGGKIAVQQNLA---------LLANQVR----LFDSTHYLKAFGIGDVWVA 324
+SP +++ V + + N A L ++R F+ST Y+ GD+ VA
Sbjct: 178 DSPSDILPVVLHYLGLDPNSANAKDYEKATALMLKIRPYMAYFNSTKYMTDIANGDICVA 237
Query: 325 VGWSSDVLP---AVKRMSNVAVV---VPKSGASLWADLWAIPAAS 363
VG+S K N VV +P+ GA +W D WAIPA++
Sbjct: 238 VGYSGSFYQFGNRAKEAGNGVVVDWRLPREGAPIWFDTWAIPASA 282
>gi|238022429|ref|ZP_04602855.1| hypothetical protein GCWU000324_02336 [Kingella oralis ATCC 51147]
gi|237867043|gb|EEP68085.1| hypothetical protein GCWU000324_02336 [Kingella oralis ATCC 51147]
Length = 382
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 84/191 (43%), Gaps = 39/191 (20%)
Query: 231 GKIWAAPYRWG--TMAIGYK-KSKFQNHNLAPIEDWKDPWWPELAGR-----ISMVNSPR 282
G +A PY WG T+AI K +K + P +W + PE G+ IS +SP
Sbjct: 139 GNKYAVPYFWGINTLAINKKLVAKALGTDQLPANEWDLVFNPEYTGKLKHCGISFFDSPT 198
Query: 283 E----VIVAGGKI----------AVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWS 328
E V+ GK A + + + + VRLF S+ Y+ G++ VA+G+
Sbjct: 199 EQFPLVLKYIGKDPNSNDKADLEAAAETMRKVRHDVRLFSSSGYINNLAQGNLCVAIGYG 258
Query: 329 SDVLPAVKRMS-----NVAVVVPKSGASLWADLWAIPAASRLETKQIGGQVRGPSPLIHQ 383
D+ A +R + ++ V+ PK+G +W D + IP + K I H+
Sbjct: 259 GDLNIAKRRAAEIGNNDIQVLTPKTGVGIWIDSFMIPK----DAKNIANA--------HK 306
Query: 384 WIEFCLQTARA 394
+I + L A
Sbjct: 307 YINYTLDAKVA 317
>gi|218514463|ref|ZP_03511303.1| spermidine/putrescine ABC transporter, substrate-binding protein
[Rhizobium etli 8C-3]
Length = 304
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 81/188 (43%), Gaps = 31/188 (16%)
Query: 204 DQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAP---- 259
D+ LS+ W V + DP G +A Y WGT IGY K L P
Sbjct: 38 DKSKLPNLSNMWDVIEQRT--ASYDP-GNEYAVDYMWGTDGIGYNVKKVA-EILGPDAKP 93
Query: 260 -IEDWKDPWWPELAGR--ISMVNSPREVIVAGGKI--------------AVQQNLALLAN 302
+E DP E I ++++P++V+ K V++ L +
Sbjct: 94 GLEVIFDPKVAEKFKDCGIYVLDTPKDVMTTALKYLGLDPNSTKAEDFKKVEELLTAVRP 153
Query: 303 QVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADL 356
+R F S+ Y+ A GD+ +A G+S D+L A R + V +P GA +W D+
Sbjct: 154 YIRKFHSSEYINALANGDICIAFGYSGDMLQARDRAAEAKNGVEVNYSIPVQGAQMWFDM 213
Query: 357 WAIPAASR 364
AIPA ++
Sbjct: 214 MAIPADAK 221
>gi|381352988|pdb|3TTM|A Chain A, Crystal Structure Of Spud In Complex With Putrescine
gi|381352989|pdb|3TTM|B Chain B, Crystal Structure Of Spud In Complex With Putrescine
Length = 346
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 93/226 (41%), Gaps = 36/226 (15%)
Query: 226 EIDPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMV 278
E+ G A PY WGT+ IGY K + + AP++ W + PE + +S +
Sbjct: 99 EVSDPGNEHAIPYMWGTIGIGYNPDKVKAAFGDNAPVDSWDLVFKPENIQKLKQCGVSFL 158
Query: 279 NSPREVIVA-----GGKIAVQQNLALLANQ---------VRLFDSTHYLKAFGIGDVWVA 324
+SP E++ A G K L A + V F S+ Y+ G++ VA
Sbjct: 159 DSPTEILPAALHYLGYKPDTDNPKELKAAEELFLKIRPYVTYFHSSKYISDLANGNICVA 218
Query: 325 VGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASRLETKQIG--GQVRG 376
+G+S D+ A R V +PK GA + D+ AIP + + +
Sbjct: 219 IGYSGDIYQAKSRAEEAKNKVTVKYNIPKEGAGSFFDMVAIPKDAENTEGALAFVNFLMK 278
Query: 377 PSPL--IHQWIEFCLQTARALPFKQEVI---PGASPSALESTLVKL 417
P + I ++F A A P E I PG PS E + KL
Sbjct: 279 PEIMAEITDVVQFPNGNAAATPLVSEAIRNDPGIYPS--EEVMKKL 322
>gi|149911832|ref|ZP_01900434.1| spermidine/putrescine ABC transporter,
periplasmicspermidine/putrescine-binding protein
[Moritella sp. PE36]
gi|149805085|gb|EDM65109.1| spermidine/putrescine ABC transporter,
periplasmicspermidine/putrescine-binding protein
[Moritella sp. PE36]
Length = 344
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 85/209 (40%), Gaps = 32/209 (15%)
Query: 231 GKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVIVAGGK 290
G ++ PY WG IG + N L I W D W P+ G++ + + RE+ K
Sbjct: 117 GNRYSIPYIWGATGIGVNTA---NIELTSITSWTDLWDPKWEGQLLLTDDAREIFHMALK 173
Query: 291 I----AVQQNLALLAN----------QVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVK 336
I A QN LA V +F+S + G+V + + W+ A +
Sbjct: 174 IQGHSANTQNEEELAQAYELLKKLMPNVLVFNSDTPANPYIAGEVELGMIWNGSTYMAQQ 233
Query: 337 RMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGQVRGPSPLIHQWIEFCLQTARALP 396
S++ +V PK GA W D AIP ++ +H+ I+F L+ A
Sbjct: 234 EDSDITMVYPKEGAVFWMDSLAIPKNAK------------NVDAVHKLIDFLLRPEVAAE 281
Query: 397 FKQEVIPGASPSALESTLVKLPEELLKGK 425
E+ P+ ++ LP+E + K
Sbjct: 282 VALEI---GYPTPNKAAKKLLPKEFTENK 307
>gi|257870119|ref|ZP_05649772.1| extracellular solute-binding protein [Enterococcus gallinarum EG2]
gi|257804283|gb|EEV33105.1| extracellular solute-binding protein [Enterococcus gallinarum EG2]
Length = 357
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 90/213 (42%), Gaps = 33/213 (15%)
Query: 227 IDPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVI- 285
DP + ++ PY WGT+ I Y F I++W D W PEL I +++ REVI
Sbjct: 126 FDPDNR-YSIPYFWGTLGIVYNDKFFAE---GEIKEWDDLWKPELKDSIMLIDGAREVIG 181
Query: 286 ----VAGGKIAVQQNLALLANQVRLFDSTHYLKAFGIGDV---------WVAVGWSSDVL 332
G + + + L A +L T +KA ++ VAV +S +
Sbjct: 182 LGLNSLGYSLNSKDDKQLTAAFNKLRKMTPNIKAIVADEIKMYMANEEASVAVTFSGEAA 241
Query: 333 PAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGQVRGPSPLIHQWIEFCLQTA 392
+ ++ V+P G++LW D IP S+ E + ++ F L+
Sbjct: 242 DMMYENEHIHYVIPSEGSNLWFDNMVIPKTSKNEEGA------------YAFLNFMLEPE 289
Query: 393 RALPFKQEVIPGASPSALESTLVKLPEELLKGK 425
A E I ++P+ + L LP+E+ + K
Sbjct: 290 NAAQ-NAEYIGYSTPN--KKALALLPDEITQDK 319
>gi|381352983|pdb|3TTK|A Chain A, Crystal Structure Of Apo-Spud
gi|381352984|pdb|3TTK|B Chain B, Crystal Structure Of Apo-Spud
gi|381352985|pdb|3TTK|C Chain C, Crystal Structure Of Apo-Spud
Length = 345
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 94/226 (41%), Gaps = 36/226 (15%)
Query: 226 EIDPRGKIWAAPYRWGTMAIGYK--KSKFQNHNLAPIEDWKDPWWPELAGR-----ISMV 278
E+ G A PY WGT+ IGY K K + AP++ W + PE + +S +
Sbjct: 99 EVSDPGNEHAIPYMWGTIGIGYNPDKVKAAFGDNAPVDSWDLVFKPENIQKLKQCGVSFL 158
Query: 279 NSPREVIVAG-------------GKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVA 324
+SP E++ A ++ + L L + V F S+ Y+ G++ VA
Sbjct: 159 DSPTEILPAALHYLGYKPDTDNPKELKAAEELFLKIRPYVTYFHSSKYISDLANGNICVA 218
Query: 325 VGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASRLETKQIG--GQVRG 376
+G+S D+ A R V +PK GA + D+ AIP + + +
Sbjct: 219 IGYSGDIYQAKSRAEEAKNKVTVKYNIPKEGAGSFFDMVAIPKDAENTEGALAFVNFLMK 278
Query: 377 PSPL--IHQWIEFCLQTARALPFKQEVI---PGASPSALESTLVKL 417
P + I ++F A A P E I PG PS E + KL
Sbjct: 279 PEIMAEITDVVQFPNGNAAATPLVSEAIRNDPGIYPS--EEVMKKL 322
>gi|242242407|ref|ZP_04796852.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Staphylococcus epidermidis
W23144]
gi|420175104|ref|ZP_14681549.1| putative spermidine/putrescine ABC transporter periplasmic
substrate-binding protein [Staphylococcus epidermidis
NIHLM061]
gi|420192847|ref|ZP_14698704.1| putative spermidine/putrescine ABC transporter periplasmic
substrate-binding protein [Staphylococcus epidermidis
NIHLM023]
gi|242234114|gb|EES36426.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Staphylococcus epidermidis
W23144]
gi|394244390|gb|EJD89735.1| putative spermidine/putrescine ABC transporter periplasmic
substrate-binding protein [Staphylococcus epidermidis
NIHLM061]
gi|394260663|gb|EJE05472.1| putative spermidine/putrescine ABC transporter periplasmic
substrate-binding protein [Staphylococcus epidermidis
NIHLM023]
Length = 357
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 67/151 (44%), Gaps = 18/151 (11%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVIVA 287
DP + ++ PY +GT+ I Y K K+ N + W D + +L I +V+ RE+I
Sbjct: 127 DPNNR-YSIPYFFGTVGILYDKEKYPNETF---DSWDDLYHSQLKNDILLVDGAREIIGM 182
Query: 288 G-GKIA-------------VQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLP 333
G K+ +++L LA QVR + VAV WS P
Sbjct: 183 GLNKLGYSLNDKNPTHIHQAEKDLHNLAPQVRGIVGDEITMMLQQNEGHVAVVWSGVAAP 242
Query: 334 AVKRMSNVAVVVPKSGASLWADLWAIPAASR 364
V+ + V+PK G++LW D IP ++
Sbjct: 243 LVQENTRYNYVIPKEGSNLWFDNMVIPKTAQ 273
>gi|421587735|ref|ZP_16033100.1| extracellular solute-binding protein [Rhizobium sp. Pop5]
gi|403707696|gb|EJZ22629.1| extracellular solute-binding protein [Rhizobium sp. Pop5]
Length = 365
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 115/261 (44%), Gaps = 48/261 (18%)
Query: 139 RVVSLQN---SVPQSWVKDFMRSQGKRLKF---------QMNLCASIDGIVNNLSTPFNK 186
RVV++ N + S ++DF + G ++ + + L A G ++ P
Sbjct: 27 RVVNVYNWSDYIDSSILEDFTKETGIKVVYDTFDSNETLETKLLAG--GTGYDVVVP--T 82
Query: 187 LSFAIKKRFIEPIAEAEDQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIG 246
+SF ++++ + + D+ LS+ W V + DP G ++ Y WGT IG
Sbjct: 83 VSF-MQRQIAAGVYQKLDKSKLPNLSNMWDVVTKG--VATFDP-GNEYSVDYMWGTTGIG 138
Query: 247 YKKSKFQNHNLAPIE--DWKDPWWPELAGR-----ISMVNSPREVIVA---------GGK 290
+ K + L E +W + P A + I M++SP +VI + K
Sbjct: 139 FNVDKVKAA-LGTDEKPNWDALFDPAKAAKLKDCGIYMLDSPTDVIPSVLAYLGLDPNSK 197
Query: 291 IAVQQNLA---LLANQ--VRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------ 339
N A LLA + VR F S+ Y+ A GD+ +A+G+S DV A R +
Sbjct: 198 KPDDLNKAQEVLLAVRPFVRKFHSSEYISALANGDICIALGFSGDVFQARDRAAEAKAGV 257
Query: 340 NVAVVVPKSGASLWADLWAIP 360
NV VP GA ++ D++ IP
Sbjct: 258 NVDYSVPNQGAQIFFDVFGIP 278
>gi|37675937|ref|NP_936333.1| spermidine/putrescine ABC transporter substrate-binding protein
[Vibrio vulnificus YJ016]
gi|37200477|dbj|BAC96303.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio vulnificus
YJ016]
Length = 360
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 88/216 (40%), Gaps = 37/216 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVIVA 287
DP ++ PY WG I Y +S AP+ W D W + A ++ +++ R+V
Sbjct: 133 DPNND-YSLPYIWGITGISYNESMVD----APVTRWADLWDKKYAQQVMLIDDIRDVFGM 187
Query: 288 GGKI--------------AVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLP 333
K+ ++L L N V L++S + G+ V + W+ +
Sbjct: 188 ALKLNGYSINTKNEDEIKKAYESLVALKNNVLLYNSDAPQVPYVSGETSVGMQWNGNAYQ 247
Query: 334 AVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGQVRGPSPLIHQWIEFCLQTAR 393
M + V+P+ GA +W D + IP+ S+ L H++I F Q
Sbjct: 248 GQVEMPELKFVMPEEGAVMWMDNFTIPSGSK------------HKELAHKFINFMYQPEH 295
Query: 394 ALPFKQEVIPG-ASPSALESTLVKLPEELLKGKPSV 428
+ E++ SA + LP+E LK P++
Sbjct: 296 ----QAEIVNSLGYASATNAGRALLPDE-LKNNPTI 326
>gi|417858952|ref|ZP_12504009.1| ABC transporter, substrate binding protein (putrescine)
[Agrobacterium tumefaciens F2]
gi|338824956|gb|EGP58923.1| ABC transporter, substrate binding protein (putrescine)
[Agrobacterium tumefaciens F2]
Length = 365
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 73/168 (43%), Gaps = 37/168 (22%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQNH-NLAPIEDWKDPWWPELAGR-----ISMVNSP 281
DP G +A Y WGT IGY +K + P++ W + PE A + I+++++
Sbjct: 121 DP-GNEYAVNYMWGTTGIGYNVAKVKAALGDVPVDSWDILFKPENAEKLKSCGINILDAS 179
Query: 282 REVIV-------------------AGGKIAVQQNLALLANQVRLFDSTHYLKAFGIGDVW 322
E AGG++ + + V+ F+S+ Y+ GD
Sbjct: 180 DETFAIAMNYLGKNPDSKETADLEAGGEV-----YSKIRPFVKTFNSSAYIDELANGDSC 234
Query: 323 VAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
+ +GWS D+L A R V V+PK G +W D AIPA ++
Sbjct: 235 ITIGWSGDILQAKSRAEEAKNGVEVNYVIPKEGTYMWFDNLAIPADAK 282
>gi|357050375|ref|ZP_09111575.1| hypothetical protein HMPREF9478_01558 [Enterococcus saccharolyticus
30_1]
gi|355381460|gb|EHG28584.1| hypothetical protein HMPREF9478_01558 [Enterococcus saccharolyticus
30_1]
Length = 357
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 90/213 (42%), Gaps = 33/213 (15%)
Query: 227 IDPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVI- 285
DP + ++ PY WGT+ I Y F I++W D W PEL I +++ REVI
Sbjct: 126 FDPDNR-YSIPYFWGTLGIVYNDKFFAE---GEIKEWDDLWKPELKDSIMLIDGAREVIG 181
Query: 286 ----VAGGKIAVQQNLALLANQVRLFDSTHYLKAFGIGDV---------WVAVGWSSDVL 332
G + + + L A +L T +KA ++ VAV +S +
Sbjct: 182 LGLNSLGYSLNSKDDKQLTAAFNKLRKMTPNIKAIVADEIKMYMANEEASVAVTFSGEAA 241
Query: 333 PAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGQVRGPSPLIHQWIEFCLQTA 392
+ ++ V+P G++LW D IP S+ E + ++ F L+
Sbjct: 242 DMMYENEHIHYVIPSEGSNLWFDNMVIPKTSKNEEGA------------YAFLNFMLEPE 289
Query: 393 RALPFKQEVIPGASPSALESTLVKLPEELLKGK 425
A E I ++P+ + L LP+E+ + K
Sbjct: 290 NAAQ-NAEYIGYSTPN--KKALALLPDEITQDK 319
>gi|424888563|ref|ZP_18312166.1| spermidine/putrescine-binding periplasmic protein [Rhizobium
leguminosarum bv. trifolii WSM2012]
gi|393174112|gb|EJC74156.1| spermidine/putrescine-binding periplasmic protein [Rhizobium
leguminosarum bv. trifolii WSM2012]
Length = 365
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 84/187 (44%), Gaps = 35/187 (18%)
Query: 204 DQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIGY---KKSKFQNHNLAP- 259
D+ LS+ W V + E DP G A Y WGT IGY K ++ ++ P
Sbjct: 99 DKSKLPNLSNMWDVIQQR--TAEYDP-GNEHAVDYMWGTDGIGYNVKKVAEILGPDVKPG 155
Query: 260 IEDWKDPWWPELAGR-----ISMVNSPREVIVAGGKI--------------AVQQNLALL 300
+E DP ++A + I ++++P++VI + ++ L +
Sbjct: 156 LEVIFDP---KVAAKFKDCGIYVLDTPKDVITTAFRYLGLDPNSTKAEDFKKAEELLTAV 212
Query: 301 ANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWA 354
+R F S+ Y+ A GD+ +A G+S D+L A R + V VP GA +W
Sbjct: 213 RPNIRKFHSSEYINALANGDICIAFGYSGDMLQARDRAAEAKNGVEVNYSVPPQGAQMWF 272
Query: 355 DLWAIPA 361
D+ AIPA
Sbjct: 273 DMMAIPA 279
>gi|408479602|ref|ZP_11185821.1| putrescine ABC transporter substrate-binding periplasmic protein
[Pseudomonas sp. R81]
Length = 364
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 70/159 (44%), Gaps = 27/159 (16%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN-HNLAPIEDWKDPWWPELAGR-----ISMVNSP 281
DP G +A PY WGT IGY K + + I+ W + PE + +S ++S
Sbjct: 120 DP-GNQYAVPYLWGTNGIGYNVDKVKEVLGVDHIDSWAVLFEPENMKKLATCGVSFMDSA 178
Query: 282 REVIVA--------------GGKIAVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGW 327
E++ A ++ L + V F S+ Y+ G++ VA G+
Sbjct: 179 DEMLPAVLNYMGLNPNSTNPDDYKKAEEKLLKVRPYVTYFHSSKYISDLANGNICVAAGF 238
Query: 328 SSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIP 360
S DV A R + N+A +PK G +LW D+ AIP
Sbjct: 239 SGDVFQAKARAAEAGKGVNIAYTIPKEGGNLWFDVLAIP 277
>gi|403068806|ref|ZP_10910138.1| spermidine:putrescine ABC transporter [Oceanobacillus sp. Ndiop]
Length = 358
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 90/225 (40%), Gaps = 56/225 (24%)
Query: 227 IDPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAP----IEDWKDPWWPELAGRISMVNSPR 282
DP G ++ PY WGT+ I Y N L P I + D W PEL +I +++ R
Sbjct: 126 FDP-GNNYSVPYFWGTVGIIY------NPTLLPEGKEITGFNDLWDPELENKILLIDGAR 178
Query: 283 EVIVAGGKIAVQQNLALLANQVRLFDSTHYLKAFG------------IGD---------- 320
E++ G L L + D H +A +GD
Sbjct: 179 EILGMG--------LNSLGYSLNDTDEDHLQEALTKLKELTPNVKAIVGDENKMLMENNE 230
Query: 321 VWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGQVRGPSPL 380
+AVGWS D + N+ VVP+ G++LW D + IP ++
Sbjct: 231 AAIAVGWSGDARDIMWENENIDYVVPEEGSNLWFDNFVIPKTAQ------------NVDA 278
Query: 381 IHQWIEFCLQTARALPFKQEVIPGASPSALESTLVKLPEELLKGK 425
HQ+I F L A E + ++P+ + L +PE+++ +
Sbjct: 279 AHQFINFMLDPEVAAQ-NTEYVSYSTPN--KEALKYMPEDMVNDE 320
>gi|388468131|ref|ZP_10142341.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas synxantha BG33R]
gi|388011711|gb|EIK72898.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas synxantha BG33R]
Length = 364
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 70/159 (44%), Gaps = 27/159 (16%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN-HNLAPIEDWKDPWWPELAGR-----ISMVNSP 281
DP G +A PY WGT IGY K + + I+ W + PE + +S ++S
Sbjct: 120 DP-GNQYAVPYLWGTNGIGYNVDKVKEVLGVDHIDSWAVLFEPENMKKLATCGVSFMDSA 178
Query: 282 REVIVA--------------GGKIAVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGW 327
E++ A ++ L + V F S+ Y+ G++ VA G+
Sbjct: 179 DEMLPAVLNYMGLDPNSTNPADYKKAEEKLLKVRPYVTYFHSSKYISDLANGNICVAAGF 238
Query: 328 SSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIP 360
S DV A R + N+A +PK G +LW D+ AIP
Sbjct: 239 SGDVFQAKARAAEAGKGVNIAYAIPKEGGNLWFDVLAIP 277
>gi|392978294|ref|YP_006476882.1| putrescine ABC transporter periplasmic-binding protein
[Enterobacter cloacae subsp. dissolvens SDM]
gi|392324227|gb|AFM59180.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Enterobacter cloacae subsp. dissolvens
SDM]
Length = 370
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 86/208 (41%), Gaps = 35/208 (16%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAP---IEDWKDPWWPELAGR-----ISMVN 279
DP K +A PY W T IG+ K + L P ++ W PE + +S ++
Sbjct: 124 DPENK-YAMPYLWATTGIGFNVDKVKAA-LGPDVKLDSWDVVLKPENLAKLKSCGVSFLD 181
Query: 280 SPREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVA 324
+P E+ A +L L L +R F S+ Y+ GD+ VA
Sbjct: 182 APEEIFATVLNYLGKDPNSNKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVA 241
Query: 325 VGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIP--AASRLETKQIGGQVRG 376
+GW+ DV A R NV+ +PK GA + D++A+P A ++ E Q +
Sbjct: 242 IGWAGDVWQAANRAKEAKNGVNVSYFIPKEGALAFFDVFAMPADAKNKDEAYQFLNYLMR 301
Query: 377 PSPLIH--QWIEFCLQTARALPFKQEVI 402
P + H + + +LP E I
Sbjct: 302 PEVIAHISDHVYYANGNKASLPLISEEI 329
>gi|15595497|ref|NP_248991.1| polyamine transporter [Pseudomonas aeruginosa PAO1]
gi|107099281|ref|ZP_01363199.1| hypothetical protein PaerPA_01000293 [Pseudomonas aeruginosa PACS2]
gi|116054026|ref|YP_788469.1| polyamine transport protein [Pseudomonas aeruginosa UCBPP-PA14]
gi|218889040|ref|YP_002437904.1| polyamine transport protein [Pseudomonas aeruginosa LESB58]
gi|254237467|ref|ZP_04930790.1| polyamine transport protein [Pseudomonas aeruginosa C3719]
gi|254243397|ref|ZP_04936719.1| polyamine transport protein [Pseudomonas aeruginosa 2192]
gi|296386793|ref|ZP_06876292.1| polyamine transport protein [Pseudomonas aeruginosa PAb1]
gi|313112089|ref|ZP_07797873.1| polyamine transport protein [Pseudomonas aeruginosa 39016]
gi|355646503|ref|ZP_09054458.1| hypothetical protein HMPREF1030_03544 [Pseudomonas sp. 2_1_26]
gi|386056364|ref|YP_005972886.1| polyamine transport protein [Pseudomonas aeruginosa M18]
gi|386063283|ref|YP_005978587.1| polyamine transport protein [Pseudomonas aeruginosa NCGM2.S1]
gi|421151363|ref|ZP_15610978.1| polyamine transport protein [Pseudomonas aeruginosa ATCC 14886]
gi|421157297|ref|ZP_15616679.1| polyamine transport protein [Pseudomonas aeruginosa ATCC 25324]
gi|421165154|ref|ZP_15623496.1| polyamine transport protein [Pseudomonas aeruginosa ATCC 700888]
gi|421172020|ref|ZP_15629800.1| polyamine transport protein [Pseudomonas aeruginosa CI27]
gi|421178210|ref|ZP_15635825.1| polyamine transport protein [Pseudomonas aeruginosa E2]
gi|424943287|ref|ZP_18359050.1| polyamine transport protein [Pseudomonas aeruginosa NCMG1179]
gi|9946145|gb|AAG03689.1|AE004468_1 polyamine transport protein [Pseudomonas aeruginosa PAO1]
gi|115589247|gb|ABJ15262.1| polyamine transport protein [Pseudomonas aeruginosa UCBPP-PA14]
gi|126169398|gb|EAZ54909.1| polyamine transport protein [Pseudomonas aeruginosa C3719]
gi|126196775|gb|EAZ60838.1| polyamine transport protein [Pseudomonas aeruginosa 2192]
gi|218769263|emb|CAW25023.1| polyamine transport protein [Pseudomonas aeruginosa LESB58]
gi|310884375|gb|EFQ42969.1| polyamine transport protein [Pseudomonas aeruginosa 39016]
gi|346059733|dbj|GAA19616.1| polyamine transport protein [Pseudomonas aeruginosa NCMG1179]
gi|347302670|gb|AEO72784.1| polyamine transport protein [Pseudomonas aeruginosa M18]
gi|348031842|dbj|BAK87202.1| polyamine transport protein [Pseudomonas aeruginosa NCGM2.S1]
gi|354828462|gb|EHF12582.1| hypothetical protein HMPREF1030_03544 [Pseudomonas sp. 2_1_26]
gi|404527400|gb|EKA37561.1| polyamine transport protein [Pseudomonas aeruginosa ATCC 14886]
gi|404538247|gb|EKA47790.1| polyamine transport protein [Pseudomonas aeruginosa CI27]
gi|404542819|gb|EKA52127.1| polyamine transport protein [Pseudomonas aeruginosa ATCC 700888]
gi|404548540|gb|EKA57487.1| polyamine transport protein [Pseudomonas aeruginosa E2]
gi|404550730|gb|EKA59454.1| polyamine transport protein [Pseudomonas aeruginosa ATCC 25324]
Length = 367
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 94/226 (41%), Gaps = 36/226 (15%)
Query: 226 EIDPRGKIWAAPYRWGTMAIGYK--KSKFQNHNLAPIEDWKDPWWPELAGR-----ISMV 278
E+ G A PY WGT+ IGY K K + AP++ W + PE + +S +
Sbjct: 119 EVSDPGNEHAIPYMWGTIGIGYNPDKVKAAFGDNAPVDSWDLVFKPENIQKLKQCGVSFL 178
Query: 279 NSPREVIVAG-------------GKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVA 324
+SP E++ A ++ + L L + V F S+ Y+ G++ VA
Sbjct: 179 DSPTEILPAALHYLGYKPDTDNPKELKAAEELFLKIRPYVTYFHSSKYISDLANGNICVA 238
Query: 325 VGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASRLETKQIG--GQVRG 376
+G+S D+ A R V +PK GA + D+ AIP + + +
Sbjct: 239 IGYSGDIYQAKSRAEEAKNKVTVKYNIPKEGAGSFFDMVAIPKDAENTEGALAFVNFLMK 298
Query: 377 PSPL--IHQWIEFCLQTARALPFKQEVI---PGASPSALESTLVKL 417
P + I ++F A A P E I PG PS E + KL
Sbjct: 299 PEIMAEITDVVQFPNGNAAATPLVSEAIRNDPGIYPS--EEVMKKL 342
>gi|172058529|ref|YP_001814989.1| extracellular solute-binding protein [Exiguobacterium sibiricum
255-15]
gi|171991050|gb|ACB61972.1| extracellular solute-binding protein family 1 [Exiguobacterium
sibiricum 255-15]
Length = 357
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 75/191 (39%), Gaps = 39/191 (20%)
Query: 227 IDPR--------GKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMV 278
IDPR G ++ PY WGT+ I Y + WKD W P L +I +
Sbjct: 117 IDPRFLDLSFDPGNKYSIPYFWGTVGIVYNQKLIDGKKPTS---WKDIWDPALKNQILLA 173
Query: 279 NSPREVI-----VAGGKIAVQQNLALLANQVRLFDSTHYLKAFGIGD----------VWV 323
+ REV+ G + L + L D T +KA +GD +
Sbjct: 174 DGAREVMGMSLNSLGYSLNETDETKLQEAKANLMDLTPNVKAI-VGDEIKLLLANEEAGI 232
Query: 324 AVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGQVRGPSPLIHQ 383
V WS D + N+ V+PK G+++W D IP ++ V+G H+
Sbjct: 233 GVVWSGDANEIMSENENLNYVIPKEGSNVWFDNVVIPKTAK--------NVKGA----HE 280
Query: 384 WIEFCLQTARA 394
+I F L A
Sbjct: 281 FINFMLDPKNA 291
>gi|392981708|ref|YP_006480295.1| polyamine transport protein [Pseudomonas aeruginosa DK2]
gi|416878352|ref|ZP_11920376.1| polyamine transport protein [Pseudomonas aeruginosa 152504]
gi|418584346|ref|ZP_13148408.1| polyamine transport protein [Pseudomonas aeruginosa MPAO1/P1]
gi|418591160|ref|ZP_13155061.1| polyamine transport protein [Pseudomonas aeruginosa MPAO1/P2]
gi|419756620|ref|ZP_14282966.1| polyamine transport protein [Pseudomonas aeruginosa PADK2_CF510]
gi|421514912|ref|ZP_15961598.1| polyamine transport protein [Pseudomonas aeruginosa PAO579]
gi|334838402|gb|EGM17124.1| polyamine transport protein [Pseudomonas aeruginosa 152504]
gi|375045844|gb|EHS38417.1| polyamine transport protein [Pseudomonas aeruginosa MPAO1/P1]
gi|375050053|gb|EHS42539.1| polyamine transport protein [Pseudomonas aeruginosa MPAO1/P2]
gi|384396993|gb|EIE43410.1| polyamine transport protein [Pseudomonas aeruginosa PADK2_CF510]
gi|392317213|gb|AFM62593.1| polyamine transport protein [Pseudomonas aeruginosa DK2]
gi|404348640|gb|EJZ74977.1| polyamine transport protein [Pseudomonas aeruginosa PAO579]
gi|453045674|gb|EME93392.1| polyamine transport protein [Pseudomonas aeruginosa PA21_ST175]
Length = 366
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 94/226 (41%), Gaps = 36/226 (15%)
Query: 226 EIDPRGKIWAAPYRWGTMAIGYK--KSKFQNHNLAPIEDWKDPWWPELAGR-----ISMV 278
E+ G A PY WGT+ IGY K K + AP++ W + PE + +S +
Sbjct: 118 EVSDPGNEHAIPYMWGTIGIGYNPDKVKAAFGDNAPVDSWDLVFKPENIQKLKQCGVSFL 177
Query: 279 NSPREVIVAG-------------GKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVA 324
+SP E++ A ++ + L L + V F S+ Y+ G++ VA
Sbjct: 178 DSPTEILPAALHYLGYKPDTDNPKELKAAEELFLKIRPYVTYFHSSKYISDLANGNICVA 237
Query: 325 VGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASRLETKQIG--GQVRG 376
+G+S D+ A R V +PK GA + D+ AIP + + +
Sbjct: 238 IGYSGDIYQAKSRAEEAKNKVTVKYNIPKEGAGSFFDMVAIPKDAENTEGALAFVNFLMK 297
Query: 377 PSPL--IHQWIEFCLQTARALPFKQEVI---PGASPSALESTLVKL 417
P + I ++F A A P E I PG PS E + KL
Sbjct: 298 PEIMAEITDVVQFPNGNAAATPLVSEAIRNDPGIYPS--EEVMKKL 341
>gi|407362291|ref|ZP_11108823.1| extracellular solute-binding protein [Pseudomonas mandelii JR-1]
Length = 367
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 85/192 (44%), Gaps = 34/192 (17%)
Query: 191 IKKRFIEPIAEAEDQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIGYKKS 250
IK + P+ A+ D FK + + L +ND G +A PY WGT IGY
Sbjct: 91 IKAGALAPLPRAQMPD-FKNMDTELLAKLANNDPG------NQYAVPYLWGTNGIGYNID 143
Query: 251 KFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNSPREVI-VAGGKIAVQQN------ 296
K + + AP++ W + E + ++M++SP E++ VA + + N
Sbjct: 144 KVRAALGDKAPVDSWDLVFNEENLAKLGQCGVAMLDSPSEMLPVALHYLGLPPNSTSPED 203
Query: 297 -------LALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPA------VKRMSNVAV 343
L L + F+S+ ++ G++ VAVGWS +L A K +A
Sbjct: 204 YKKAEALLLKLRPHIAYFNSSKFISDLANGNICVAVGWSGAMLEAKTNAEQAKNGVKIAY 263
Query: 344 VVPKSGASLWAD 355
+PK GA +W D
Sbjct: 264 SLPKEGAPVWFD 275
>gi|331268532|ref|YP_004395024.1| extracellular solute-binding protein [Clostridium botulinum
BKT015925]
gi|329125082|gb|AEB75027.1| Bacterial extracellular solute-binding protein, putative
[Clostridium botulinum BKT015925]
Length = 347
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 68/152 (44%), Gaps = 21/152 (13%)
Query: 227 IDPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVIV 286
DP+ + ++ PY WGT+ I Y ++ I+ W W P+ +I MV+S R+ I
Sbjct: 120 FDPKNQ-YSVPYMWGTVGIIYNTKLIKDK----IDSWDALWNPKYKDQILMVDSQRDAIA 174
Query: 287 A-----GGKIAVQQNLALLANQVRLFDSTHYLKAFGIGDVW----------VAVGWSSDV 331
G I + L + L ++A+ +GD +AV WS D
Sbjct: 175 VALKKLGYSINTRNKDELKKAEQELMKQKPLVRAY-VGDEVKDLMVDEEGSIAVVWSGDA 233
Query: 332 LPAVKRMSNVAVVVPKSGASLWADLWAIPAAS 363
+ +K N+ V+PK G++LW D IP S
Sbjct: 234 VTMMKNNPNLRYVIPKEGSNLWFDNMVIPKGS 265
>gi|152988404|ref|YP_001345786.1| polyamine transport protein [Pseudomonas aeruginosa PA7]
gi|150963562|gb|ABR85587.1| polyamine transport protein [Pseudomonas aeruginosa PA7]
Length = 367
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 94/226 (41%), Gaps = 36/226 (15%)
Query: 226 EIDPRGKIWAAPYRWGTMAIGYK--KSKFQNHNLAPIEDWKDPWWPELAGR-----ISMV 278
E+ G A PY WGT+ IGY K K + AP++ W + PE + +S +
Sbjct: 119 EVSDPGNEHAIPYMWGTIGIGYNPDKVKAAFGDNAPVDSWDLVFKPENIQKLKQCGVSFL 178
Query: 279 NSPREVIVAG-------------GKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVA 324
+SP E++ A ++ + L L + V F S+ Y+ G++ VA
Sbjct: 179 DSPTEILPAALHYLGYKPDTDNPKELKAAEELFLKIRPYVTYFHSSKYISDLANGNICVA 238
Query: 325 VGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASRLETKQIG--GQVRG 376
+G+S D+ A R V +PK GA + D+ AIP + + +
Sbjct: 239 IGYSGDIYQAKSRAEEAKNKVTVKYNIPKEGAGSFFDMVAIPKDAENTEGALAFVNFLMK 298
Query: 377 PSPL--IHQWIEFCLQTARALPFKQEVI---PGASPSALESTLVKL 417
P + I ++F A A P E I PG PS E + KL
Sbjct: 299 PEIMAEITDVVQFPNGNAAATPLVSEAIRNDPGIYPS--EEVMKKL 342
>gi|27367812|ref|NP_763339.1| ABC transporter periplasmic spermidine putrescine-binding protein
potD [Vibrio vulnificus CMCP6]
gi|27359385|gb|AAO08329.1| ABC transporter, periplasmic spermidine putrescine-binding protein
potD [Vibrio vulnificus CMCP6]
Length = 360
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 88/216 (40%), Gaps = 37/216 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVIVA 287
DP ++ PY WG I Y +S AP+ W D W + A ++ +++ R+V
Sbjct: 133 DPNND-YSLPYIWGITGISYNESMVD----APVTRWADLWDKKYAQQVMLIDDIRDVFGM 187
Query: 288 GGKI--------------AVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLP 333
K+ ++L L N V L++S + G+ V + W+ +
Sbjct: 188 ALKLNGYSINTKNEDEIKKAYESLVALKNNVLLYNSDAPQVPYVSGETSVGMQWNGNAYQ 247
Query: 334 AVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGQVRGPSPLIHQWIEFCLQTAR 393
M + V+P+ GA +W D + IP+ S+ L H++I F Q
Sbjct: 248 GQVEMPELKFVMPEEGAVMWMDNFTIPSGSK------------HKELAHKFINFMYQPEH 295
Query: 394 ALPFKQEVIPG-ASPSALESTLVKLPEELLKGKPSV 428
+ E++ SA + LP+E LK P++
Sbjct: 296 ----QAEIVNSLGYASATNAGRALLPDE-LKNNPTI 326
>gi|378824967|ref|YP_005187699.1| Spermidine/putrescine-binding periplasmic protein SPBP
[Sinorhizobium fredii HH103]
gi|365178019|emb|CCE94874.1| Spermidine/putrescine-binding periplasmic protein SPBP; Flags:
Precursor [Sinorhizobium fredii HH103]
Length = 364
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 115/263 (43%), Gaps = 50/263 (19%)
Query: 139 RVVSLQN---SVPQSWVKDFMRSQGKRLKF---------QMNLCASIDGIVNNLSTPFNK 186
RVV++ N + S ++DF + G ++ + + L A G ++ P
Sbjct: 26 RVVNVYNWSDYIDDSLLEDFTKETGIKVVYDVFDSNEILETKLLAGGSGY--DVVVP--T 81
Query: 187 LSFAIKKRFIEPIAEAEDQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIG 246
SF ++++ + + D+ LS+ W V + + DP G +A Y WGT IG
Sbjct: 82 ASF-LQRQIAAGVFQKLDKSKLPNLSNMWDVIMERT--AKYDP-GNEYAVDYMWGTTGIG 137
Query: 247 YKKSKFQ---NHNLAPIEDWKDPWWPELAGR-----ISMVNSPREVI-VAGGKIAV---- 293
Y K + + P W + PE+A + I +++S +++ A + +
Sbjct: 138 YNVDKMKEILGTDAKP--GWDVIFNPEIAAKFKDCGIHLLDSATDIMPSALAYLGLDPDS 195
Query: 294 --QQNLALLAN-------QVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS----- 339
Q +L A+ +R F S+ Y+ A GD+ +AVG+S D+ A R +
Sbjct: 196 HKQADLEKAADLLMKVRPYIRKFHSSEYINALANGDICLAVGFSGDIFQARDRAAEAKAG 255
Query: 340 -NVAVVVPKSGASLWADLWAIPA 361
V +P GA +W D+ A+PA
Sbjct: 256 VTVDYSIPPQGAQMWFDMLAMPA 278
>gi|426408506|ref|YP_007028605.1| extracellular solute-binding protein [Pseudomonas sp. UW4]
gi|426266723|gb|AFY18800.1| extracellular solute-binding protein [Pseudomonas sp. UW4]
Length = 365
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 82/189 (43%), Gaps = 39/189 (20%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQNHN-LAPIEDWKDPWWPELAGR-----ISMVNSP 281
DP G ++APY WG+ + Y K + API + P++ R ++++++P
Sbjct: 121 DP-GTQYSAPYTWGSNGVTYNVDKIKERMPDAPIGSLAMIFDPKIVSRFADCGVTLLDAP 179
Query: 282 REVI-------------VAGGKIAVQQNLALLAN-QVRLFDSTHYLKAFGIGDVWVAVGW 327
EVI A + Q L L +R FDS +YL + GDV +A+ W
Sbjct: 180 TEVIPMALTYLGRDPNSAAPADLKAAQELLLSVRPYIRKFDSVNYLTSLPNGDVCMAMTW 239
Query: 328 SSDV------LPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGQVRGPSPLI 381
S D K+ N+A +PK G+ +W D IPA + +
Sbjct: 240 SGDYATAMARAAEAKKQINLAYFIPKEGSLIWFDNLYIPA----DATHVANA-------- 287
Query: 382 HQWIEFCLQ 390
H+++E+ +Q
Sbjct: 288 HKFLEYLMQ 296
>gi|350552223|ref|ZP_08921428.1| extracellular solute-binding protein family 1 [Thiorhodospira
sibirica ATCC 700588]
gi|349794876|gb|EGZ48684.1| extracellular solute-binding protein family 1 [Thiorhodospira
sibirica ATCC 700588]
Length = 361
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 101/236 (42%), Gaps = 48/236 (20%)
Query: 227 IDPRGKIWAAPYRWGTMAIGYKKSKFQNH-NLAPIED-WKDPWWPELAGR-----ISMVN 279
+DP + + PY WGT IG+ +K Q I D W + P LA + I++++
Sbjct: 115 VDPDNR-YIVPYMWGTTGIGFNPAKVQQALGTEKIPDSWSLIFDPALAEKLSGCGIAVLD 173
Query: 280 SPREVIVAG--------------GKIAVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAV 325
E + A A + A + +R F ++ Y+ GD+ VA
Sbjct: 174 DEGEALAAALMYLGEDPNTHDPQAIAAAAELFAQVRPFIRYFHASKYINDLANGDICVAH 233
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASRLETKQIGGQVRGPSP 379
G+S DVL A R V ++P+ GA LW D+ AIPA + P+P
Sbjct: 234 GYSGDVLQARDRAEEAGRGVTVDYLIPQEGAVLWFDVMAIPADA-------------PNP 280
Query: 380 L-IHQWIEFCLQTARALPFKQEVIPGASPSALESTLVKLPEELLKGKPSV--DTNL 432
H +I+F LQ V+ A+ +A + LV +E ++ P + D++L
Sbjct: 281 ENAHAFIDFLLQPENIAEITN-VVAYANANASATALV---DEAIRNDPGIYPDSDL 332
>gi|417100713|ref|ZP_11960231.1| spermidine/putrescine ABC transporter, substrate-binding protein
[Rhizobium etli CNPAF512]
gi|327192172|gb|EGE59145.1| spermidine/putrescine ABC transporter, substrate-binding protein
[Rhizobium etli CNPAF512]
Length = 365
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 81/188 (43%), Gaps = 31/188 (16%)
Query: 204 DQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAP---- 259
D+ LS+ W V + DP G +A Y WGT IGY K L P
Sbjct: 99 DKSKLPNLSNMWDVIEQR--TASYDP-GNEYAVDYMWGTDGIGYNVKKVA-EILGPDAKP 154
Query: 260 -IEDWKDPWWPELAGR--ISMVNSPREVIVAGGKI--------------AVQQNLALLAN 302
+E DP E I ++++P++V+ K V++ L +
Sbjct: 155 GLEVIFDPKVAEKFKDCGIYVLDTPKDVMTTALKYLGLDPNSTKAEDFKKVEELLTAVRP 214
Query: 303 QVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADL 356
+R F S+ Y+ A GD+ +A G+S D+L A R + V +P GA +W D+
Sbjct: 215 YIRKFHSSEYINALANGDICIAFGYSGDMLQARDRAAEAKNGVEVNYSIPVQGAQMWFDM 274
Query: 357 WAIPAASR 364
AIPA ++
Sbjct: 275 MAIPADAK 282
>gi|190890422|ref|YP_001976964.1| spermidine/putrescine ABC transporter substrate-binding protein
[Rhizobium etli CIAT 652]
gi|190695701|gb|ACE89786.1| spermidine/putrescine ABC transporter, substrate-binding protein
[Rhizobium etli CIAT 652]
Length = 365
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 81/188 (43%), Gaps = 31/188 (16%)
Query: 204 DQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAP---- 259
D+ LS+ W V + DP G +A Y WGT IGY K L P
Sbjct: 99 DKSKLPNLSNMWDVIEQR--TASYDP-GNEYAVDYMWGTDGIGYNVKKVA-EILGPDAKP 154
Query: 260 -IEDWKDPWWPELAGR--ISMVNSPREVIVAGGKI--------------AVQQNLALLAN 302
+E DP E I ++++P++V+ K V++ L +
Sbjct: 155 GLEVIFDPKVAEKFKDCGIYVLDTPKDVMTTALKYLGLDPNSTKAEDFKKVEELLTAVRP 214
Query: 303 QVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADL 356
+R F S+ Y+ A GD+ +A G+S D+L A R + V +P GA +W D+
Sbjct: 215 YIRKFHSSEYINALANGDICIAFGYSGDMLQARDRAAEAKNGVEVNYSIPVQGAQMWFDM 274
Query: 357 WAIPAASR 364
AIPA ++
Sbjct: 275 MAIPADAK 282
>gi|452878416|ref|ZP_21955627.1| polyamine transport protein [Pseudomonas aeruginosa VRFPA01]
gi|452184920|gb|EME11938.1| polyamine transport protein [Pseudomonas aeruginosa VRFPA01]
Length = 366
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 94/226 (41%), Gaps = 36/226 (15%)
Query: 226 EIDPRGKIWAAPYRWGTMAIGYK--KSKFQNHNLAPIEDWKDPWWPELAGR-----ISMV 278
E+ G A PY WGT+ IGY K K + AP++ W + PE + +S +
Sbjct: 118 EVSDPGNEHAIPYMWGTIGIGYNPDKVKAAFGDNAPVDSWDLVFKPENIQKLKQCGVSFL 177
Query: 279 NSPREVIVAG-------------GKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVA 324
+SP E++ A ++ + L L + V F S+ Y+ G++ VA
Sbjct: 178 DSPTEILPAALHYLGYKPDTDNPKELKAAEELFLKIRPYVTYFHSSKYISDLANGNICVA 237
Query: 325 VGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASRLETKQIG--GQVRG 376
+G+S D+ A R V +PK GA + D+ AIP + + +
Sbjct: 238 IGYSGDIYQAKSRAEEAKNKVTVKYNIPKEGAGSFFDMVAIPKDAENTEGALAFVNFLMK 297
Query: 377 PSPL--IHQWIEFCLQTARALPFKQEVI---PGASPSALESTLVKL 417
P + I ++F A A P E I PG PS E + KL
Sbjct: 298 PEIMAEITDVVQFPNGNAAATPLVSEAIRNDPGIYPS--EEVMKKL 341
>gi|229844342|ref|ZP_04464482.1| spermidine/putrescine ABC transporter periplasmic-binding protein
[Haemophilus influenzae 6P18H1]
gi|229812591|gb|EEP48280.1| spermidine/putrescine ABC transporter periplasmic-binding protein
[Haemophilus influenzae 6P18H1]
Length = 350
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 112/287 (39%), Gaps = 59/287 (20%)
Query: 138 LRVVSLQNSVPQSWVKDFMRSQG---------------KRLKFQMNLCASIDGIVNNLST 182
L V + + VP V F + G +LK N + D +V S
Sbjct: 30 LYVYNWTDYVPSDLVAQFSKETGIEVIYSTFESNEEMYAKLKLTQNTGSGYD-LVFPSSY 88
Query: 183 PFNKLSFAIKKRFIEPIAEAEDQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGT 242
NK+ IK++ ++PI DQ + K L E DP K ++ PY +G
Sbjct: 89 YVNKM---IKEKMLQPI----DQSKLTNIHQIPKHLLNK----EFDPENK-YSLPYVYGL 136
Query: 243 MAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREV----IVAGGK-------- 290
I + + I W D W PE G++ M + REV ++ GK
Sbjct: 137 TGIEVNADEI---DPKTITSWADLWKPEFKGKVLMTSDAREVFHVALLLDGKSPNTTNEE 193
Query: 291 ---IAVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPK 347
A ++ LL N V F+S + G+V + + W+ A K ++ V PK
Sbjct: 194 DIKTAYERLEKLLPN-VATFNSDSPEVPYVQGEVAIGMIWNGSAYLAQKENQSLQFVYPK 252
Query: 348 SGASLWADLWAIPAASRLETKQIGGQVRGPSPLIHQWIEFCLQTARA 394
GA W D +AIP ++ V G H++I+F L+ A
Sbjct: 253 EGAIFWMDNYAIPTTAK--------NVEGA----HKFIDFLLRPENA 287
>gi|218675073|ref|ZP_03524742.1| spermidine/putrescine ABC transporter, substrate-binding protein
[Rhizobium etli GR56]
Length = 365
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 82/188 (43%), Gaps = 31/188 (16%)
Query: 204 DQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAP---- 259
D+ LS+ W V + A DP G +A Y WGT IGY K L P
Sbjct: 99 DKSKLPNLSNMWDVIQQRTAA--YDP-GNEYAVDYMWGTDGIGYNVKKVA-EILGPDAKP 154
Query: 260 -IEDWKDPWWPELAGR--ISMVNSPREVIVAGGKI--------------AVQQNLALLAN 302
+E DP E I ++++P++V+ + V++ L +
Sbjct: 155 GLEVIFDPKVAEKFKDCGIYVLDTPKDVMTTALRYLGLDPNSTKAEDFKKVEELLTAVRP 214
Query: 303 QVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADL 356
+R F S+ Y+ A GD+ +A G+S D+L A R + V +P GA +W D+
Sbjct: 215 YIRKFHSSEYINALANGDICIAFGYSGDMLQARDRAAEAKNGVEVNYSIPVQGAQMWFDM 274
Query: 357 WAIPAASR 364
AIPA ++
Sbjct: 275 MAIPADAK 282
>gi|148827692|ref|YP_001292445.1| spermidine/putrescine ABC transporter periplasmic-binding protein
[Haemophilus influenzae PittGG]
gi|148718934|gb|ABR00062.1| spermidine/putrescine ABC transporter periplasmic-binding protein
[Haemophilus influenzae PittGG]
Length = 350
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 112/287 (39%), Gaps = 59/287 (20%)
Query: 138 LRVVSLQNSVPQSWVKDFMRSQG---------------KRLKFQMNLCASIDGIVNNLST 182
L V + + VP V F + G +LK N + D +V S
Sbjct: 30 LYVYNWTDYVPSDLVAQFSKETGIEVIYSTFESNEEMYAKLKLTQNTGSGYD-LVFPSSY 88
Query: 183 PFNKLSFAIKKRFIEPIAEAEDQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGT 242
NK+ IK++ ++PI DQ + K L E DP K ++ PY +G
Sbjct: 89 YVNKM---IKEKMLQPI----DQSKLTNIHQIPKHLLNK----EFDPENK-YSLPYVYGL 136
Query: 243 MAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREV----IVAGGK-------- 290
I + + I W D W PE G++ M + REV ++ GK
Sbjct: 137 TGIEVNADEI---DPKTITSWADLWKPEFKGKVLMTSDAREVFHVALLLDGKSPNTTNEE 193
Query: 291 ---IAVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPK 347
A ++ LL N V F+S + G+V + + W+ A K ++ V PK
Sbjct: 194 DIKTAYERLEKLLPN-VATFNSDSPEVPYVQGEVAIGMIWNGSAYLAQKENQSLQFVYPK 252
Query: 348 SGASLWADLWAIPAASRLETKQIGGQVRGPSPLIHQWIEFCLQTARA 394
GA W D +AIP ++ V G H++I+F L+ A
Sbjct: 253 EGAIFWMDNYAIPTTAK--------NVEGA----HKFIDFLLRPENA 287
>gi|354722725|ref|ZP_09036940.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Enterobacter mori LMG 25706]
Length = 370
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 79/186 (42%), Gaps = 33/186 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAP---IEDWKDPWWPELAGR-----ISMVN 279
DP K +A PY W T IGY K + L P ++ W PE + +S ++
Sbjct: 124 DPDNK-YAMPYLWATTGIGYNVDKVKAA-LGPDVKLDSWDVVLKPENLEKLKSCGVSFLD 181
Query: 280 SPREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVA 324
+P E+ A +L L L +R F S+ Y+ GD+ VA
Sbjct: 182 APEEIFATVLNYLGKDPNSNKANDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVA 241
Query: 325 VGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIP--AASRLETKQIGGQVRG 376
+GW+ DV A R NV+ +PK GA + D++A+P A ++ E Q +
Sbjct: 242 IGWAGDVWQAANRAKEAKNGVNVSYFIPKEGALAFFDVFAMPADAKNKDEAYQFLNYLMR 301
Query: 377 PSPLIH 382
P + H
Sbjct: 302 PDVIAH 307
>gi|320158082|ref|YP_004190460.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Vibrio vulnificus MO6-24/O]
gi|319933394|gb|ADV88257.1| ABC transporter, periplasmic spermidine putrescine-binding protein
PotD [Vibrio vulnificus MO6-24/O]
Length = 344
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 88/216 (40%), Gaps = 37/216 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVIVA 287
DP ++ PY WG I Y +S AP+ W D W + A ++ +++ R+V
Sbjct: 117 DPNND-YSLPYIWGITGISYNESMVD----APVTRWADLWDKKYAQQVMLIDDIRDVFGM 171
Query: 288 GGKI--------------AVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLP 333
K+ ++L L N V L++S + G+ V + W+ +
Sbjct: 172 ALKLNGYSINTKNEDEIKKAYESLVALKNNVLLYNSDAPQVPYVSGETSVGMQWNGNAYQ 231
Query: 334 AVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGQVRGPSPLIHQWIEFCLQTAR 393
M + V+P+ GA +W D + IP+ S+ L H++I F Q
Sbjct: 232 GQVEMPELKFVMPEEGAVMWMDNFTIPSGSK------------HKELAHKFINFMYQPEH 279
Query: 394 ALPFKQEVIPG-ASPSALESTLVKLPEELLKGKPSV 428
+ E++ SA + LP+E LK P++
Sbjct: 280 ----QAEIVNSLGYASATNAGRALLPDE-LKNNPTI 310
>gi|160895165|ref|ZP_02075938.1| hypothetical protein CLOL250_02725 [Clostridium sp. L2-50]
gi|156863199|gb|EDO56630.1| ABC transporter, solute-binding protein [Clostridium sp. L2-50]
Length = 354
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 96/237 (40%), Gaps = 28/237 (11%)
Query: 147 VPQSWVKDFMRSQGKRLK---FQMN--LCASIDGIVNNLSTPFNKLSFAIKKRFIEPIAE 201
VP +KDF + G ++ F N + A + + ++ + + E
Sbjct: 47 VPDEVIKDFEKEYGIKVNVSTFSSNEDMLAKVKSEDEGTYDIVQPSDYMVESMIAQGMLE 106
Query: 202 AEDQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIE 261
DQD LS+ YL DP G +++ PY+ G AI K I+
Sbjct: 107 KLDQDALTNLSNIGSQYLDPT----YDP-GNVYSVPYQGGVAAIAVNTDKVSTD----IK 157
Query: 262 DWKDPWWPELAGRISMVNSPREVI-------------VAGGKIA-VQQNLALLANQVRLF 307
+ D + P L G+I ++ R VI K+A V+ L L + + ++
Sbjct: 158 GYADLFDPSLKGQIVALDDYRAVIGMTERSMGLSMNETDTAKLAEVETKLLTLKDNIAVY 217
Query: 308 DSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 364
DS + GD + WS++V A+ ++ +V P+ GA + D WAI ++
Sbjct: 218 DSDSPKSSLISGDCNIGYCWSAEVALAMDENPSIKIVFPEEGAYKFIDNWAIAKGAK 274
>gi|1573475|gb|AAC22155.1| spermidine/putrescine ABC transporter, periplasmic-binding protein
(potD) [Haemophilus influenzae Rd KW20]
Length = 312
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 101/248 (40%), Gaps = 44/248 (17%)
Query: 162 RLKFQMNLCASIDGIVNNLSTPFNKLSFAIKKRFIEPIAEAEDQDWFKRLSHKWKVYLRS 221
+LK N + D +V S NK+ IK++ ++PI DQ + K L
Sbjct: 31 KLKLTQNTGSGYD-LVFPSSYYVNKM---IKEKMLQPI----DQSKLTNIHQIPKHLLNK 82
Query: 222 NDAGEIDPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSP 281
E DP K ++ PY +G I + I W D W PE G++ M +
Sbjct: 83 ----EFDPENK-YSLPYVYGLTGIEVNADEIDPKT---ITSWADLWKPEFKGKVLMTSDA 134
Query: 282 REV----IVAGGK-----------IAVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVG 326
REV ++ GK A ++ LL N V F+S + G+V + +
Sbjct: 135 REVFHVALLLDGKSPNTTNEEDIKTAYERLEKLLPN-VATFNSDSPEVPYVQGEVAIGMI 193
Query: 327 WSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGQVRGPSPLIHQWIE 386
W+ A K ++ V PK GA W D +AIP ++ V G H++I+
Sbjct: 194 WNGSAYLAQKENQSLQFVYPKEGAIFWMDNYAIPTTAK--------NVEGA----HKFID 241
Query: 387 FCLQTARA 394
F L+ A
Sbjct: 242 FLLRPENA 249
>gi|401762953|ref|YP_006577960.1| putrescine ABC transporter periplasmic-binding protein
[Enterobacter cloacae subsp. cloacae ENHKU01]
gi|400174487|gb|AFP69336.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Enterobacter cloacae subsp. cloacae
ENHKU01]
Length = 370
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 86/208 (41%), Gaps = 35/208 (16%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAP---IEDWKDPWWPELAGR-----ISMVN 279
DP K +A PY W T IGY K + L P ++ W PE + +S ++
Sbjct: 124 DPDNK-YAMPYLWATTGIGYNVDKVKAA-LGPDVKLDSWDVVLKPENLEKLKSCGVSFLD 181
Query: 280 SPREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVA 324
+P E+ A +L L L +R F S+ Y+ GD+ VA
Sbjct: 182 APEEIFATVLNYLGKDPNSNKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVA 241
Query: 325 VGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIP--AASRLETKQIGGQVRG 376
+GW+ DV A R NV+ +PK GA + D++A+P A ++ E Q +
Sbjct: 242 IGWAGDVWQAANRAKEAKNGVNVSYFIPKEGALAFFDVFAMPADAKNKDEAYQFLNYLMR 301
Query: 377 PSPLIH--QWIEFCLQTARALPFKQEVI 402
P + H + + ++P E I
Sbjct: 302 PDVIAHISDHVYYANGNKASVPLVSEAI 329
>gi|145630323|ref|ZP_01786104.1| ribokinase [Haemophilus influenzae R3021]
gi|144984058|gb|EDJ91495.1| ribokinase [Haemophilus influenzae R3021]
Length = 350
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 112/287 (39%), Gaps = 59/287 (20%)
Query: 138 LRVVSLQNSVPQSWVKDFMRSQG---------------KRLKFQMNLCASIDGIVNNLST 182
L V + + VP V F + G +LK N + D +V S
Sbjct: 30 LYVYNWTDYVPSDLVAQFSKETGIEVIYSTFESNEEMYAKLKLTQNTGSGYD-LVFPSSY 88
Query: 183 PFNKLSFAIKKRFIEPIAEAEDQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGT 242
NK+ IK++ ++PI DQ + K L E DP K ++ PY +G
Sbjct: 89 YVNKM---IKEKMLQPI----DQSKLTNIHQIPKHLLNK----EFDPENK-YSLPYVYGL 136
Query: 243 MAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREV----IVAGGK-------- 290
I + + I W D W PE G++ M + REV ++ GK
Sbjct: 137 TGIEVNADEI---DPKTITSWADLWKPEFKGKVLMTSDAREVFHVALLLDGKSPNTTNEE 193
Query: 291 ---IAVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPK 347
A ++ LL N V F+S + G+V + + W+ A K ++ V PK
Sbjct: 194 DIKTAYERLEKLLPN-VATFNSDSPEVPYVQGEVAIGMIWNGSAYLAQKENQSLQFVYPK 252
Query: 348 SGASLWADLWAIPAASRLETKQIGGQVRGPSPLIHQWIEFCLQTARA 394
GA W D +AIP ++ V G H++I+F L+ A
Sbjct: 253 EGAIFWMDNYAIPTTAK--------NVEGA----HKFIDFLLRPENA 287
>gi|418328747|ref|ZP_12939849.1| ABC transporter, solute-binding protein [Staphylococcus epidermidis
14.1.R1.SE]
gi|365231674|gb|EHM72701.1| ABC transporter, solute-binding protein [Staphylococcus epidermidis
14.1.R1.SE]
Length = 357
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 67/151 (44%), Gaps = 18/151 (11%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVIVA 287
DP + ++ PY +GT+ I Y K K+ N + W D + +L I +V+ RE+I
Sbjct: 127 DPNNR-YSIPYFFGTVGILYDKEKYPNETF---DSWGDLYHSQLKNDILLVDGAREIIGM 182
Query: 288 G-GKIA-------------VQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLP 333
G K+ +++L LA QVR + VAV WS P
Sbjct: 183 GLNKLGYSLNDKNPTHIHQAEKDLHNLAPQVRGIVGDEITMMLQQNEGHVAVVWSGVAAP 242
Query: 334 AVKRMSNVAVVVPKSGASLWADLWAIPAASR 364
V+ + V+PK G++LW D IP ++
Sbjct: 243 LVQENTRYNYVIPKEGSNLWFDNMVIPKTAQ 273
>gi|375335501|ref|ZP_09776845.1| extracellular solute-binding protein [Succinivibrionaceae bacterium
WG-1]
Length = 367
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 72/162 (44%), Gaps = 28/162 (17%)
Query: 227 IDPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVN 279
+DP +A PY G+ IGY K + + ++ W + PE + ++++N
Sbjct: 121 LDPDNA-YAIPYTQGSTGIGYNVGKIKQIFGDDYVVDSWDLIFKPENLSKMKDCGVAVLN 179
Query: 280 SPREVIVAG--------------GKIAVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAV 325
+P E+I ++ L + V F S+ Y+ GD+ +++
Sbjct: 180 APTEIIATAMHYLGLPNQPMDIKAYAPAEELLMKMRENVTYFHSSQYINDMANGDICLSI 239
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPA 361
GWS D+L A R ++ VVPK GA ++ D+ AIPA
Sbjct: 240 GWSGDMLQAASRAEEANNGVHLDYVVPKEGALIFFDMLAIPA 281
>gi|30995379|ref|NP_438656.2| spermidine/putrescine ABC transporter periplasmic-binding protein
[Haemophilus influenzae Rd KW20]
gi|145638587|ref|ZP_01794196.1| predicted cytoplasmic sugar-binding protein [Haemophilus influenzae
PittII]
gi|260580439|ref|ZP_05848267.1| spermidine/putrescine-binding periplasmic protein 2 [Haemophilus
influenzae RdAW]
gi|21431815|sp|P44731.2|POTD2_HAEIN RecName: Full=Spermidine/putrescine-binding periplasmic protein 2;
Short=SPBP; Flags: Precursor
gi|145272182|gb|EDK12090.1| predicted cytoplasmic sugar-binding protein [Haemophilus influenzae
PittII]
gi|260092781|gb|EEW76716.1| spermidine/putrescine-binding periplasmic protein 2 [Haemophilus
influenzae RdAW]
gi|309750089|gb|ADO80073.1| Spermidine/putrescine ABC transporter, periplasmic-binding protein
[Haemophilus influenzae R2866]
Length = 350
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 112/287 (39%), Gaps = 59/287 (20%)
Query: 138 LRVVSLQNSVPQSWVKDFMRSQG---------------KRLKFQMNLCASIDGIVNNLST 182
L V + + VP V F + G +LK N + D +V S
Sbjct: 30 LYVYNWTDYVPSDLVAQFSKETGIEVIYSTFESNEEMYAKLKLTQNTGSGYD-LVFPSSY 88
Query: 183 PFNKLSFAIKKRFIEPIAEAEDQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGT 242
NK+ IK++ ++PI DQ + K L E DP K ++ PY +G
Sbjct: 89 YVNKM---IKEKMLQPI----DQSKLTNIHQIPKHLLNK----EFDPENK-YSLPYVYGL 136
Query: 243 MAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREV----IVAGGK-------- 290
I + + I W D W PE G++ M + REV ++ GK
Sbjct: 137 TGIEVNADEI---DPKTITSWADLWKPEFKGKVLMTSDAREVFHVALLLDGKSPNTTNEE 193
Query: 291 ---IAVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPK 347
A ++ LL N V F+S + G+V + + W+ A K ++ V PK
Sbjct: 194 DIKTAYERLEKLLPN-VATFNSDSPEVPYVQGEVAIGMIWNGSAYLAQKENQSLQFVYPK 252
Query: 348 SGASLWADLWAIPAASRLETKQIGGQVRGPSPLIHQWIEFCLQTARA 394
GA W D +AIP ++ V G H++I+F L+ A
Sbjct: 253 EGAIFWMDNYAIPTTAK--------NVEGA----HKFIDFLLRPENA 287
>gi|167031932|ref|YP_001667163.1| extracellular solute-binding protein [Pseudomonas putida GB-1]
gi|166858420|gb|ABY96827.1| extracellular solute-binding protein family 1 [Pseudomonas putida
GB-1]
Length = 359
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 72/163 (44%), Gaps = 27/163 (16%)
Query: 226 EIDPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGRIS------M 277
E++ G + PY WG+ IGY K + + AP++ W + PE ++ +
Sbjct: 111 EVNDPGNQYGFPYLWGSTGIGYNIDKVKAVLGDNAPLDSWDLIFKPEYMSKLKSCGVAVL 170
Query: 278 VNSPREVIVAGGKIAV---QQNLA------LLANQVR----LFDSTHYLKAFGIGDVWVA 324
N P + +A + + QN A L QVR F S+ Y GD+ V
Sbjct: 171 DNGPELLPIALHYLGLPHHSQNPADYDKAKALLMQVRPYISYFHSSKYTGDLANGDICVV 230
Query: 325 VGWSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIPA 361
VG+S DVL A R V +PK GA +W D+ A+PA
Sbjct: 231 VGFSGDVLQAKNRAEEAKNGVKVGYSIPKEGAPMWFDMVAMPA 273
>gi|334119180|ref|ZP_08493267.1| extracellular solute-binding protein family 1 [Microcoleus
vaginatus FGP-2]
gi|333458651|gb|EGK87268.1| extracellular solute-binding protein family 1 [Microcoleus
vaginatus FGP-2]
Length = 376
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 76/180 (42%), Gaps = 35/180 (19%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWW--PELAGRISMVNSPREVI 285
DP G ++ P WGT + Y + + EDW+ W ELA R+++ + REV+
Sbjct: 148 DP-GNRYSVPLSWGTTGLIYNTEQLKEEP----EDWEYLWQHKQELAKRMTLASDVREVM 202
Query: 286 VAGGKI--------------AVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDV 331
A ++ + L L + F + + GD+ VA+ +SSD
Sbjct: 203 GAALRMLGYSLNSTNQEQVKQAYEKLVELKPAIASFTTDAWRPQMLTGDLKVAMCYSSDA 262
Query: 332 LPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGQVRGPSP-LIHQWIEFCLQ 390
+ + VVPKSG+SLW D IP S P+P ++WI F LQ
Sbjct: 263 NEVISDNDKLKYVVPKSGSSLWTDTLVIPKGS-------------PNPEAAYKWINFMLQ 309
>gi|422408927|ref|ZP_16485888.1| spermidine/putrescine-binding periplasmic protein 2, partial
[Listeria monocytogenes FSL F2-208]
gi|313609957|gb|EFR85339.1| spermidine/putrescine-binding periplasmic protein 2 [Listeria
monocytogenes FSL F2-208]
Length = 312
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 84/190 (44%), Gaps = 32/190 (16%)
Query: 234 WAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVIVAG----G 289
++ PY WGT+ I Y K F + N + W + PEL +I +++ REV+ G G
Sbjct: 132 YSMPYFWGTLGIIYNKEMFPDKNF---DTWNALFDPELKNQILLIDGAREVMGLGLNSLG 188
Query: 290 KIAVQQNLA-LLANQVRLFDSTHYLKAFGIGD----------VWVAVGWSSDVLPAVKRM 338
N A L A + +L T +KA +GD VAV +S + +
Sbjct: 189 YSLNDTNKAHLQAARDKLETMTPNVKAI-VGDEIKLLMADNEAGVAVTFSGEAAEMLSEN 247
Query: 339 SNVAVVVPKSGASLWADLWAIPAASRLETKQIGGQVRGPSPLIHQWIEFCLQTARALPFK 398
++ V+PK G++LW D IP + K + G H++I F L+ A
Sbjct: 248 EDLEYVIPKDGSNLWFDNMVIPKTA----KNVDGA--------HKFINFMLKPENA-AIN 294
Query: 399 QEVIPGASPS 408
E + A+P+
Sbjct: 295 AEYVGYATPN 304
>gi|170725493|ref|YP_001759519.1| extracellular solute-binding protein [Shewanella woodyi ATCC 51908]
gi|169810840|gb|ACA85424.1| extracellular solute-binding protein family 1 [Shewanella woodyi
ATCC 51908]
Length = 366
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 94/215 (43%), Gaps = 41/215 (19%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGRIS-----MVNS 280
DP G ++ PY WGT IGY + K + AP + + + P+ A ++S M++S
Sbjct: 121 DP-GNEYSVPYLWGTTGIGYNEGKVKEILGEDAPTDSLELLFNPKYAEKLSKCGLSMLDS 179
Query: 281 PREVI-VAGGKIAVQQNLALLANQ-------------VRLFDSTHYLKAFGIGDVWVAVG 326
E++ +A + + N A+ V F S+ Y+ GD+ VA G
Sbjct: 180 ADEMLPMALVYLGLDPNSNSKADYKKAGEVLDKVRPFVTYFHSSRYITDLANGDICVAFG 239
Query: 327 WSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIPAASRLETKQIGGQVRGPSPL 380
+S DV A R + +PK GA+LW D+ AIPA + V+
Sbjct: 240 YSGDVFQAAARAEEAENGQVIGYSIPKEGANLWFDMLAIPADA--------ANVKNA--- 288
Query: 381 IHQWIEFCLQTARALPFKQEVIPGASPSALESTLV 415
H +I + L+ P + + A+P+A TLV
Sbjct: 289 -HTFINYILRPEVIAPI-TDYVAYANPNAAAETLV 321
>gi|416124466|ref|ZP_11595462.1| bacterial extracellular solute-binding family protein
[Staphylococcus epidermidis FRI909]
gi|418634606|ref|ZP_13196999.1| ABC transporter, solute-binding protein [Staphylococcus epidermidis
VCU129]
gi|420177479|ref|ZP_14683815.1| putative spermidine/putrescine ABC transporter periplasmic
substrate-binding protein [Staphylococcus epidermidis
NIHLM057]
gi|420180221|ref|ZP_14686476.1| putative spermidine/putrescine ABC transporter periplasmic
substrate-binding protein [Staphylococcus epidermidis
NIHLM053]
gi|420189697|ref|ZP_14695665.1| putative spermidine/putrescine ABC transporter periplasmic
substrate-binding protein [Staphylococcus epidermidis
NIHLM037]
gi|420204050|ref|ZP_14709610.1| putative spermidine/putrescine ABC transporter periplasmic
substrate-binding protein [Staphylococcus epidermidis
NIHLM015]
gi|319401576|gb|EFV89786.1| bacterial extracellular solute-binding family protein
[Staphylococcus epidermidis FRI909]
gi|374836829|gb|EHS00406.1| ABC transporter, solute-binding protein [Staphylococcus epidermidis
VCU129]
gi|394247863|gb|EJD93105.1| putative spermidine/putrescine ABC transporter periplasmic
substrate-binding protein [Staphylococcus epidermidis
NIHLM057]
gi|394251260|gb|EJD96359.1| putative spermidine/putrescine ABC transporter periplasmic
substrate-binding protein [Staphylococcus epidermidis
NIHLM053]
gi|394261032|gb|EJE05834.1| putative spermidine/putrescine ABC transporter periplasmic
substrate-binding protein [Staphylococcus epidermidis
NIHLM037]
gi|394274064|gb|EJE18489.1| putative spermidine/putrescine ABC transporter periplasmic
substrate-binding protein [Staphylococcus epidermidis
NIHLM015]
Length = 357
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 67/151 (44%), Gaps = 18/151 (11%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVIVA 287
DP + ++ PY +GT+ I Y K K+ N + W D + +L I +V+ RE+I
Sbjct: 127 DPNNR-YSIPYFFGTVGILYDKEKYPNETF---DSWGDLYHSQLKNDILLVDGAREIIGM 182
Query: 288 G-GKIA-------------VQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLP 333
G K+ +++L LA QVR + VAV WS P
Sbjct: 183 GLNKLGYSLNDKNPTHIHQAEKDLHNLAPQVRGIVGDEITMMLQQNEGHVAVVWSGVAAP 242
Query: 334 AVKRMSNVAVVVPKSGASLWADLWAIPAASR 364
V+ + V+PK G++LW D IP ++
Sbjct: 243 LVQENTRYNYVIPKEGSNLWFDNMVIPKTAQ 273
>gi|145634502|ref|ZP_01790211.1| spermidine/putrescine ABC transporter periplasmic-binding protein
[Haemophilus influenzae PittAA]
gi|145268047|gb|EDK08042.1| spermidine/putrescine ABC transporter periplasmic-binding protein
[Haemophilus influenzae PittAA]
Length = 350
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 112/287 (39%), Gaps = 59/287 (20%)
Query: 138 LRVVSLQNSVPQSWVKDFMRSQG---------------KRLKFQMNLCASIDGIVNNLST 182
L V + + VP V F + G +LK N + D +V S
Sbjct: 30 LYVYNWTDYVPSDLVAQFSKETGIEVIYSTFESNEEMYAKLKLTQNTGSGYD-LVFPSSY 88
Query: 183 PFNKLSFAIKKRFIEPIAEAEDQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGT 242
NK+ IK++ ++PI DQ + K L E DP K ++ PY +G
Sbjct: 89 YVNKM---IKEKMLQPI----DQSKLTNIHQIPKHLLNK----EFDPENK-YSLPYVYGL 136
Query: 243 MAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREV----IVAGGK-------- 290
I + + I W D W PE G++ M + REV ++ GK
Sbjct: 137 TGIEVNADEI---DPKTITSWADLWKPEFKGKVLMTSDAREVFHVALLLDGKSPNTTNEE 193
Query: 291 ---IAVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPK 347
A ++ LL N V F+S + G+V + + W+ A K ++ V PK
Sbjct: 194 DIKTAYERLEKLLPN-VATFNSDSPEVPYVQGEVAIGMIWNGSAYLAQKENQSLQFVYPK 252
Query: 348 SGASLWADLWAIPAASRLETKQIGGQVRGPSPLIHQWIEFCLQTARA 394
GA W D +AIP ++ V G H++I+F L+ A
Sbjct: 253 EGAIFWMDNYAIPTTAK--------NVEGA----HKFIDFLLRPENA 287
>gi|401678958|ref|ZP_10810908.1| family 1 extracellular solute-binding protein [Enterobacter sp.
SST3]
gi|400213809|gb|EJO44745.1| family 1 extracellular solute-binding protein [Enterobacter sp.
SST3]
Length = 370
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 73/166 (43%), Gaps = 31/166 (18%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAP---IEDWKDPWWPELAGR-----ISMVN 279
DP K +A PY W T IGY K + L P ++ W PE + +S ++
Sbjct: 124 DPDNK-YAMPYLWATTGIGYNVDKVKAA-LGPDVKLDSWDVVLKPENLEKLKSCGVSFLD 181
Query: 280 SPREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVA 324
+P E+ A +L L L +R F S+ Y+ GD+ VA
Sbjct: 182 APEEIFATVLNYLGKDPNSNKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVA 241
Query: 325 VGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
+GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 242 IGWAGDVWQAANRAKEAKNGVNVSYFIPKEGALAFFDVFAMPADAK 287
>gi|425902196|ref|ZP_18878787.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas chlororaphis subsp. aureofaciens 30-84]
gi|397881644|gb|EJK98133.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas chlororaphis subsp. aureofaciens 30-84]
Length = 364
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 74/159 (46%), Gaps = 27/159 (16%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQNH-NLAPIEDWKDPWWPELAGRIS-----MVNSP 281
DP G +A PY WGT IGY K + + I+ W + PE ++S ++S
Sbjct: 120 DP-GNQYAVPYLWGTNGIGYNVEKVKAALGVDKIDSWAMLFEPENIKKLSSCGVAFLDSA 178
Query: 282 REVIVA----GGKIAVQQN--------LALLANQ--VRLFDSTHYLKAFGIGDVWVAVGW 327
E++ A G QN LLA + V F+S+ Y+ G++ VA G+
Sbjct: 179 DEMLPAVLNYMGLDPNSQNPDDYKKAEAKLLAVRPYVTYFNSSKYISDLANGEICVAAGF 238
Query: 328 SSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIP 360
S DV A R + +A V+PK G +LW D+ AIP
Sbjct: 239 SGDVFQAKARAAEAGKGIEIAYVIPKEGGNLWFDMLAIP 277
>gi|145633546|ref|ZP_01789275.1| spermidine/putrescine ABC transporter periplasmic-binding protein
[Haemophilus influenzae 3655]
gi|378696696|ref|YP_005178654.1| polyamine transporter subunit [Haemophilus influenzae 10810]
gi|144985915|gb|EDJ92523.1| spermidine/putrescine ABC transporter periplasmic-binding protein
[Haemophilus influenzae 3655]
gi|301169215|emb|CBW28812.1| polyamine transporter subunit [Haemophilus influenzae 10810]
Length = 350
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 112/287 (39%), Gaps = 59/287 (20%)
Query: 138 LRVVSLQNSVPQSWVKDFMRSQG---------------KRLKFQMNLCASIDGIVNNLST 182
L V + + VP V F + G +LK N + D +V S
Sbjct: 30 LYVYNWTDYVPSDLVAQFSKETGIEVIYSTFESNEEMYAKLKLTQNTGSGYD-LVFPSSY 88
Query: 183 PFNKLSFAIKKRFIEPIAEAEDQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGT 242
NK+ IK++ ++PI DQ + K L E DP K ++ PY +G
Sbjct: 89 YVNKM---IKEKMLQPI----DQSKLTNIHQIPKHLLNK----EFDPENK-YSLPYVYGL 136
Query: 243 MAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREV----IVAGGK-------- 290
I + + I W D W PE G++ M + REV ++ GK
Sbjct: 137 TGIEVNADEI---DPKTITSWADLWKPEFKGKVLMTSDAREVFHVALLLDGKSPNTTNEE 193
Query: 291 ---IAVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPK 347
A ++ LL N V F+S + G+V + + W+ A K ++ V PK
Sbjct: 194 DIKTAYERLEKLLPN-VATFNSDSPEVPYVQGEVAIGMIWNGSAYLAQKENQSLQFVYPK 252
Query: 348 SGASLWADLWAIPAASRLETKQIGGQVRGPSPLIHQWIEFCLQTARA 394
GA W D +AIP ++ V G H++I+F L+ A
Sbjct: 253 EGAIFWMDNYAIPTTAK--------NVEGA----HKFIDFLLRPENA 287
>gi|398921654|ref|ZP_10659972.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM49]
gi|398165041|gb|EJM53164.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM49]
Length = 368
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 85/194 (43%), Gaps = 39/194 (20%)
Query: 223 DAGEIDPRGKIWAAPYRWGTMAIGYKKSKFQNHN-LAPIEDWKDPWWPELAGR-----IS 276
D DP G ++APY WG+ + Y K + API + P++ R ++
Sbjct: 119 DLQGFDP-GTTYSAPYTWGSNGVTYNVDKIKERMPDAPIGSLAMIFDPKIVSRFADCGVT 177
Query: 277 MVNSPREVI-------------VAGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVW 322
++++P EVI A + Q+L L + +R FDS +YL + GDV
Sbjct: 178 LLDAPTEVIPMALKYLGRDPNSAAPADLKAAQDLLLSVRPYIRKFDSVNYLTSLPNGDVC 237
Query: 323 VAVGWSSDV------LPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGQVRG 376
+A+ WS D K+ ++A +PK G+ +W D IPA + +
Sbjct: 238 MAMTWSGDYATAMARAAEAKKKIDLAYFIPKEGSLIWFDNMYIPA----DAPHVANA--- 290
Query: 377 PSPLIHQWIEFCLQ 390
H+++E+ +Q
Sbjct: 291 -----HKFLEYLMQ 299
>gi|417891784|ref|ZP_12535841.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21200]
gi|341851070|gb|EGS91999.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21200]
Length = 357
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 68/149 (45%), Gaps = 17/149 (11%)
Query: 230 RGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVI-VAG 288
+G ++ PY +GT+ I Y K K+ N + + WK + P+ +I +V+ RE+I ++
Sbjct: 128 KGNKYSLPYFFGTVGILYNKEKYPNESF---DSWKSLYNPKFKNQILLVDGAREIIGMSL 184
Query: 289 GKIA-------------VQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAV 335
K+ +++L LA QVR + +AV WS P V
Sbjct: 185 NKLGYNLNDRNSHHLKEAERDLTKLAPQVRGVVGDEITMMLEQNEGNIAVFWSGVAAPLV 244
Query: 336 KRMSNVAVVVPKSGASLWADLWAIPAASR 364
+ V+PK G++LW D IP ++
Sbjct: 245 QEGDKYNYVIPKEGSNLWFDNMVIPKTAQ 273
>gi|315302123|ref|ZP_07873078.1| spermidine/putrescine-binding periplasmic protein 2 [Listeria
ivanovii FSL F6-596]
gi|313629511|gb|EFR97689.1| spermidine/putrescine-binding periplasmic protein 2 [Listeria
ivanovii FSL F6-596]
Length = 353
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 91/203 (44%), Gaps = 34/203 (16%)
Query: 234 WAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVIVAG----G 289
++ PY WGT+ I Y K F + N + W + P+L +I +++ REV+ G G
Sbjct: 128 YSMPYFWGTLGIIYNKKMFPDKNF---DTWDALFDPDLKNQILLIDGAREVMGLGLNSLG 184
Query: 290 KIAVQQNLA-LLANQVRLFDSTHYLKAFGIGD----------VWVAVGWSSDVLPAVKRM 338
N A L+ + +L T +KA +GD VAV +S + +
Sbjct: 185 YSLNDTNKAHLMEARDKLETMTPNVKAI-VGDEIKLLMADNEAGVAVTFSGEAAEMLSEN 243
Query: 339 SNVAVVVPKSGASLWADLWAIPAASRLETKQIGGQVRGPSPLIHQWIEFCLQTARALPFK 398
++ ++PK G++LW D IP + K + G H++I F L+ A
Sbjct: 244 EDLEYMIPKDGSNLWFDNMVIPKTA----KNVDGA--------HKFINFMLKPENA-AIN 290
Query: 399 QEVIPGASPSALESTLVKLPEEL 421
E + A+P+ E + LP+E+
Sbjct: 291 AEYVGYATPN--EKAVKLLPKEI 311
>gi|426410137|ref|YP_007030236.1| putrescine ABC transporter periplasmic protein [Pseudomonas sp.
UW4]
gi|426268354|gb|AFY20431.1| putrescine ABC transporter periplasmic protein [Pseudomonas sp.
UW4]
Length = 366
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 115/262 (43%), Gaps = 42/262 (16%)
Query: 138 LRVVSLQNSVPQSWVKDFMRSQGKRLK---FQMNLCASIDGIVNN----LSTPFNK-LSF 189
LRV + + + S KDF R G ++ F N + N L P N+ +
Sbjct: 29 LRVYNWADYILPSVPKDFARDTGIKVTWDTFDTNESLEAKLLTGNSGYDLVVPSNQFIET 88
Query: 190 AIKKRFIEPIAEAEDQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIGYKK 249
IK + + +++ +W SH+ L+ D DP G + PY +GT+ IG+
Sbjct: 89 QIKAGVFQKLDKSKLPNW----SHQDPALLKLLDKN--DP-GNQYGVPYMYGTVLIGFNP 141
Query: 250 SKFQN--HNLAPIEDWKDPWWPE-----LAGRISMVNSPREVI-VAGGKIAVQQN----- 296
+K + AP++ W + PE A ++M++SP E++ +A + + N
Sbjct: 142 AKVKAALGENAPVDSWDLVFKPENMEKLKACGVAMLDSPSEILPLALHYLGLDPNSQNPD 201
Query: 297 -----LALLAN---QVRLFDSTHYLKAFGIGDVWVAVGWSSDVLP---AVKRMSNVAVV- 344
AL+ V F+S Y+ GD+ VA+G+S K N VV
Sbjct: 202 DYEKAKALMLKVRPYVTYFNSAKYMTDIANGDICVAIGYSGSFYQFGNRAKEAGNGVVVD 261
Query: 345 --VPKSGASLWADLWAIPAASR 364
+PK GA +W D +AIP +++
Sbjct: 262 WRLPKEGAPIWFDTFAIPKSAK 283
>gi|398921870|ref|ZP_10660034.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM49]
gi|398164240|gb|EJM52383.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM49]
Length = 366
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 116/263 (44%), Gaps = 44/263 (16%)
Query: 138 LRVVSLQNSVPQSWVKDFMRSQGKRLK---FQMNLCASIDGIVNN----LSTPFNK-LSF 189
LRV + + + S KDF + G ++ F N + N L P N+ +
Sbjct: 29 LRVYNWADYILPSVPKDFAKDTGIKVTWDTFDTNESLEAKLLTGNSGYDLVVPSNQFIET 88
Query: 190 AIKKRFIEPIAEAEDQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIGYKK 249
IK + + +++ +W SH+ L+ D DP G + PY +GT+ IG+
Sbjct: 89 QIKAGVFQKLDKSKLPNW----SHQDPALLKLLDKN--DP-GNQYGVPYMYGTVLIGFNP 141
Query: 250 SKFQ---NHNLAPIEDWKDPWWPE-----LAGRISMVNSPREVI-VAGGKIAVQQN---- 296
+K + N AP++ W + PE A ++M++SP E++ +A + + N
Sbjct: 142 AKVKAALGEN-APVDSWDLVFKPENMEKLKACGVAMLDSPSEILPLALHYLGLDPNSQNP 200
Query: 297 ------LALLAN---QVRLFDSTHYLKAFGIGDVWVAVGWSSDVLP---AVKRMSNVAVV 344
AL+ V F+S Y+ GD+ VA+G+S K N VV
Sbjct: 201 DDYEKAKALMLKVRPYVTYFNSAKYMTDIANGDICVAIGYSGSFYQFGNRAKEAGNGVVV 260
Query: 345 ---VPKSGASLWADLWAIPAASR 364
+PK GA +W D +AIP ++R
Sbjct: 261 DWRLPKEGAPIWFDTFAIPKSAR 283
>gi|258436148|ref|ZP_05689131.1| extracellular solute-binding protein, family 1 [Staphylococcus
aureus A9299]
gi|257848837|gb|EEV72822.1| extracellular solute-binding protein, family 1 [Staphylococcus
aureus A9299]
Length = 357
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 68/149 (45%), Gaps = 17/149 (11%)
Query: 230 RGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVI-VAG 288
+G ++ PY +GT+ I Y K K+ N + + WK + P+ +I +V+ RE+I ++
Sbjct: 128 KGNKYSLPYFFGTVGILYNKEKYPNESF---DSWKSLYNPKFKNQILLVDGAREIIGMSL 184
Query: 289 GKIA-------------VQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAV 335
K+ +++L LA QVR + +AV WS P V
Sbjct: 185 NKLGYNLNDRNSHHLKEAERDLTKLAPQVRGVVGDEITMMLQQNEGNIAVVWSGVAAPLV 244
Query: 336 KRMSNVAVVVPKSGASLWADLWAIPAASR 364
+ V+PK G++LW D IP ++
Sbjct: 245 QEGDKYNYVIPKEGSNLWFDNMVIPKTAQ 273
>gi|336249457|ref|YP_004593167.1| putrescine ABC transporter periplasmic-binding protein
[Enterobacter aerogenes KCTC 2190]
gi|444352385|ref|YP_007388529.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Enterobacter aerogenes EA1509E]
gi|334735513|gb|AEG97888.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Enterobacter aerogenes KCTC 2190]
gi|443903215|emb|CCG30989.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Enterobacter aerogenes EA1509E]
Length = 370
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 71/165 (43%), Gaps = 29/165 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP K +A PY W T IGY K + P+ W PE + +S +++
Sbjct: 124 DPDNK-YAMPYMWATTGIGYNVDKVKAALGKDVPLNSWDLVLKPENLEKLKSCGVSFLDA 182
Query: 281 PREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAV 325
P E+ A +L L L +R F S+ Y+ GD+ VA+
Sbjct: 183 PEEIFSTVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 242
Query: 326 GWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
GW+ DV A R N++ +PK GA + D++A+PA ++
Sbjct: 243 GWAGDVWQAANRAKEAKNGVNISYFIPKEGALAFFDVFAMPADAK 287
>gi|82750711|ref|YP_416452.1| spermidine/putrescine-binding periplasmic protein precursor
[Staphylococcus aureus RF122]
gi|82656242|emb|CAI80656.1| spermidine/putrescine-binding periplasmic protein precursor
[Staphylococcus aureus RF122]
Length = 357
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 68/149 (45%), Gaps = 17/149 (11%)
Query: 230 RGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVI-VAG 288
+G ++ PY +GT+ I Y K K+ N + + WK + P+ +I +V+ RE+I ++
Sbjct: 128 KGNKYSLPYFFGTVGILYNKEKYPNESF---DSWKSLYNPKFKNQILLVDGAREIIGMSL 184
Query: 289 GKIA-------------VQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAV 335
K+ +++L LA QVR + +AV WS P V
Sbjct: 185 NKLGYNLNDRNSHHLKEAERDLTKLAPQVRGVVGDEITMMLQQNEGNIAVVWSGVAAPLV 244
Query: 336 KRMSNVAVVVPKSGASLWADLWAIPAASR 364
+ V+PK G++LW D IP ++
Sbjct: 245 QEGDKYNYVIPKEGSNLWFDNMVIPKTAQ 273
>gi|429210726|ref|ZP_19201892.1| putative periplasmic polyamine binding protein [Pseudomonas sp. M1]
gi|428158140|gb|EKX04687.1| putative periplasmic polyamine binding protein [Pseudomonas sp. M1]
Length = 352
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 110/256 (42%), Gaps = 38/256 (14%)
Query: 138 LRVVSLQNSVPQSWVKDFMRSQGKRLKFQMNLCASI------DGIVNNLSTP-FNKLSFA 190
+RV + + + +KDF ++ G R+++ A G +++ P N L
Sbjct: 23 IRVYNWNDYIAPEALKDFEKASGVRVEYHTYSTAEELKQALRSGEKIDVAVPSHNDLPQL 82
Query: 191 IKKRFIEPIAEAEDQDWFKRLSHKWKV--YLRSNDAGEIDPRGKIWAAPYRWGTMAIGYK 248
IK + I+P+ F RL ++ + L S A +DP + A PY WG + +
Sbjct: 83 IKDKLIQPLD-------FTRLPNRSHLDPQLMSKLAA-VDPDNR-HAVPYLWGAVGLAVN 133
Query: 249 KSKFQNHNLAPIED-WKDPWWPELAGRI-----SMVNSPREVI-----VAGGKIA----- 292
+ + + P+ D W + P+ + R+ S++++P E G A
Sbjct: 134 QPQAEKALGGPVPDSWSLLFDPQYSARLKSCGLSLLDAPDETFSVLMNYQGRNFARSAPT 193
Query: 293 ----VQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKS 348
Q L L +R DS Y++ G + VA+ W D L A + V VVP+
Sbjct: 194 QIRRAGQVLEALRPNLRYIDSERYIQDLNDGKLCVAMAWVGDALHAARAGQPVHFVVPQE 253
Query: 349 GASLWADLWAIPAASR 364
G+ L+ D +P++++
Sbjct: 254 GSVLFIDNLVVPSSAQ 269
>gi|423093075|ref|ZP_17080871.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas fluorescens Q2-87]
gi|397882178|gb|EJK98665.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas fluorescens Q2-87]
Length = 370
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 81/193 (41%), Gaps = 40/193 (20%)
Query: 225 GEIDPRGKIWAAPYRWGTMAIGYKKSKFQNH-NLAPIEDWKDPWWPELAGR-----ISMV 278
G+ +G A PY WGT+ IGY K + + I+ W PE + +S +
Sbjct: 122 GDASDKGNQHAFPYMWGTIGIGYNPEKVKAALGVDKIDSWDTLLKPENLAKLKSCGVSFL 181
Query: 279 NSPREVIVAG----GKIAVQQNLALLAN----------QVRLFDSTHYLKAFGIGDVWVA 324
+SP E+I G Q+ LA+ + F S+ Y+ G++ VA
Sbjct: 182 DSPTEMIPVALHYLGYPTDSQDKKQLADAEALFLKLRPSIGYFHSSKYISDLANGNICVA 241
Query: 325 VGWSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIPA-ASRLETKQIGGQVRGP 377
VG+S D+ + R + VA +PK GA + D+ AIP A +E
Sbjct: 242 VGYSGDIEQSKSRAAEAGGKVKVAYTIPKEGAGSFYDMVAIPKDAENVEAA--------- 292
Query: 378 SPLIHQWIEFCLQ 390
++W+ F +Q
Sbjct: 293 ----YKWMNFIMQ 301
>gi|86750471|ref|YP_486967.1| extracellular solute-binding protein [Rhodopseudomonas palustris
HaA2]
gi|86573499|gb|ABD08056.1| extracellular solute-binding protein, family 1 [Rhodopseudomonas
palustris HaA2]
Length = 371
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 74/164 (45%), Gaps = 28/164 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP G +AA Y WGT IGY + A I+ W + PE + + M++S
Sbjct: 126 DP-GNHYAANYMWGTTGIGYNVGAVKRILGEGAVIDSWDIVFKPENLAKFKECGVQMLDS 184
Query: 281 PREVIVAG-GKIAVQQN-------------LALLANQVRLFDSTHYLKAFGIGDVWVAVG 326
+++ A ++ + N +A + VR F S+ YL A G++ + VG
Sbjct: 185 ADDILPAALTRLGLDPNSTKQPDLEKAADAVAKVRPSVRKFHSSEYLNALATGEICLVVG 244
Query: 327 WSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
WS D+ A R + + +PK GA ++ D AIPA ++
Sbjct: 245 WSGDIKQAQARATEANNGVEIGYAIPKEGAQMFFDNLAIPADAK 288
>gi|399008538|ref|ZP_10711009.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM17]
gi|398116267|gb|EJM06035.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM17]
Length = 355
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 74/159 (46%), Gaps = 27/159 (16%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQNH-NLAPIEDWKDPWWPELAGRIS-----MVNSP 281
DP G +A PY WGT IGY K + + I+ W + PE ++S ++S
Sbjct: 111 DP-GNQYAVPYLWGTNGIGYNVEKVKAALGVDKIDSWAMLFEPENIKKLSSCGVAFLDSA 169
Query: 282 REVIVA----GGKIAVQQN--------LALLANQ--VRLFDSTHYLKAFGIGDVWVAVGW 327
E++ A G QN LLA + V F+S+ Y+ G++ VA G+
Sbjct: 170 DEMLPAVLNYMGLDPNSQNPDDYKKAEAKLLAVRPYVTYFNSSKYISDLANGEICVAAGF 229
Query: 328 SSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIP 360
S DV A R + +A V+PK G +LW D+ AIP
Sbjct: 230 SGDVFQAKARAAEAGKGIEIAYVIPKEGGNLWFDMLAIP 268
>gi|389682707|ref|ZP_10174045.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas chlororaphis O6]
gi|388553435|gb|EIM16690.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas chlororaphis O6]
Length = 364
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 74/159 (46%), Gaps = 27/159 (16%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQNH-NLAPIEDWKDPWWPELAGRIS-----MVNSP 281
DP G +A PY WGT IGY K + + I+ W + PE ++S ++S
Sbjct: 120 DP-GNQYAVPYLWGTNGIGYNVEKVKAALGVDKIDSWAMLFEPENIKKLSSCGVAFLDSA 178
Query: 282 REVIVA----GGKIAVQQN--------LALLANQ--VRLFDSTHYLKAFGIGDVWVAVGW 327
E++ A G QN LLA + V F+S+ Y+ G++ VA G+
Sbjct: 179 DEMLPAVLNYMGLDPNSQNPDDYKKAEAKLLAVRPYVTYFNSSKYISDLANGEICVAAGF 238
Query: 328 SSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIP 360
S DV A R + +A V+PK G +LW D+ AIP
Sbjct: 239 SGDVFQAKARAAEAGKGIEIAYVIPKEGGNLWFDMLAIP 277
>gi|386830638|ref|YP_006237292.1| ABC transporter extracellular binding protein [Staphylococcus
aureus subsp. aureus HO 5096 0412]
gi|417798993|ref|ZP_12446145.1| putative spermidine/putrescine ABC transporter [Staphylococcus
aureus subsp. aureus 21310]
gi|418655576|ref|ZP_13217427.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus IS-105]
gi|334274885|gb|EGL93191.1| putative spermidine/putrescine ABC transporter [Staphylococcus
aureus subsp. aureus 21310]
gi|375036327|gb|EHS29402.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus IS-105]
gi|385196030|emb|CCG15647.1| ABC transporter extracellular binding protein [Staphylococcus
aureus subsp. aureus HO 5096 0412]
Length = 357
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 68/149 (45%), Gaps = 17/149 (11%)
Query: 230 RGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVI-VAG 288
+G ++ PY +GT+ I Y K K+ N + + WK + P+ +I +V+ RE+I ++
Sbjct: 128 KGNKYSLPYFFGTVGILYNKEKYPNESF---DSWKSLYNPKFKNQILLVDGAREIIGMSL 184
Query: 289 GKIA-------------VQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAV 335
K+ +++L LA QVR + +AV WS P V
Sbjct: 185 NKLGYNLNDRNSHHLKEAERDLTKLAPQVRGVVGDEITMMLQQNEGNIAVVWSGVAAPLV 244
Query: 336 KRMSNVAVVVPKSGASLWADLWAIPAASR 364
+ V+PK G++LW D IP ++
Sbjct: 245 QEGDKYNYVIPKEGSNLWFDNMVIPKTAQ 273
>gi|434404601|ref|YP_007147486.1| spermidine/putrescine-binding periplasmic protein [Cylindrospermum
stagnale PCC 7417]
gi|428258856|gb|AFZ24806.1| spermidine/putrescine-binding periplasmic protein [Cylindrospermum
stagnale PCC 7417]
Length = 361
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 68/149 (45%), Gaps = 21/149 (14%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWW--PELAGRISMVNSPREVI 285
DP K + P+ WGT + Y K + AP EDW W +L R++++N REVI
Sbjct: 133 DPNNK-YCIPFNWGTTGLIYNSEKLET---AP-EDWDYLWQNKEKLNKRMTLLNDVREVI 187
Query: 286 VAGGKI--------------AVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDV 331
A ++ + L +L V FD+ + GD+ +A+ +S D
Sbjct: 188 GATLRMLGYSYNSQNETEIKQAYEKLKVLKPAVSAFDTDAWQNQLLAGDLLLAMCYSGDA 247
Query: 332 LPAVKRMSNVAVVVPKSGASLWADLWAIP 360
+ + + V+P+SG++LW D IP
Sbjct: 248 VKMSRENPKLKFVIPRSGSTLWTDNLVIP 276
>gi|385781330|ref|YP_005757501.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus 11819-97]
gi|418574553|ref|ZP_13138720.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21333]
gi|364522319|gb|AEW65069.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus 11819-97]
gi|371978684|gb|EHO95925.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21333]
Length = 357
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 68/149 (45%), Gaps = 17/149 (11%)
Query: 230 RGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVI-VAG 288
+G ++ PY +GT+ I Y K K+ N + + WK + P+ +I +V+ RE+I ++
Sbjct: 128 KGNKYSLPYFFGTVGILYNKEKYPNESF---DSWKSLYNPKFKNQILLVDGAREIIGMSL 184
Query: 289 GKIA-------------VQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAV 335
K+ +++L LA QVR + +AV WS P V
Sbjct: 185 NKLGYNLNDRNSHHLKEAERDLTKLAPQVRGVVGDEITMMLQQNEGNIAVVWSGVAAPLV 244
Query: 336 KRMSNVAVVVPKSGASLWADLWAIPAASR 364
+ V+PK G++LW D IP ++
Sbjct: 245 QEGDKYNYVIPKEGSNLWFDNMVIPKTAQ 273
>gi|49483265|ref|YP_040489.1| ABC transporter [Staphylococcus aureus subsp. aureus MRSA252]
gi|257425154|ref|ZP_05601580.1| ABC transporter extracellular binding protein [Staphylococcus
aureus subsp. aureus 55/2053]
gi|257430452|ref|ZP_05606834.1| ABC transporter extracellular binding protein [Staphylococcus
aureus subsp. aureus 68-397]
gi|257433154|ref|ZP_05609512.1| ABC transporter extracellular binding protein [Staphylococcus
aureus subsp. aureus E1410]
gi|257436053|ref|ZP_05612100.1| ABC transporter extracellular binding protein [Staphylococcus
aureus subsp. aureus M876]
gi|282903651|ref|ZP_06311539.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Staphylococcus
aureus subsp. aureus C160]
gi|282905420|ref|ZP_06313275.1| spermidine/putrescine transport system substrate-binding protein
[Staphylococcus aureus subsp. aureus Btn1260]
gi|282908392|ref|ZP_06316223.1| ABC transporter extracellular binding protein [Staphylococcus
aureus subsp. aureus WW2703/97]
gi|282910679|ref|ZP_06318482.1| ABC transporter extracellular binding protein [Staphylococcus
aureus subsp. aureus WBG10049]
gi|282913877|ref|ZP_06321664.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Staphylococcus
aureus subsp. aureus M899]
gi|282923923|ref|ZP_06331599.1| spermidine/putrescine transport system substrate-binding protein
[Staphylococcus aureus subsp. aureus C101]
gi|283957846|ref|ZP_06375297.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Staphylococcus
aureus subsp. aureus A017934/97]
gi|293500914|ref|ZP_06666765.1| spermidine/putrescine transport system substrate-binding protein
[Staphylococcus aureus subsp. aureus 58-424]
gi|293509870|ref|ZP_06668579.1| ABC transporter extracellular binding protein [Staphylococcus
aureus subsp. aureus M809]
gi|293526456|ref|ZP_06671141.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Staphylococcus
aureus subsp. aureus M1015]
gi|295427590|ref|ZP_06820222.1| spermidine/putrescine transport system substrate-binding protein
[Staphylococcus aureus subsp. aureus EMRSA16]
gi|297591456|ref|ZP_06950094.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Staphylococcus aureus
subsp. aureus MN8]
gi|379020809|ref|YP_005297471.1| ABC transporter, periplasmic spermidineputrescine-binding protein
PotD [Staphylococcus aureus subsp. aureus M013]
gi|384547288|ref|YP_005736541.1| spermidine/putrescine-binding periplasmic protein precursor
[Staphylococcus aureus subsp. aureus ED133]
gi|384868016|ref|YP_005748212.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Staphylococcus aureus
subsp. aureus TCH60]
gi|415684381|ref|ZP_11449510.1| ABC transporter extracellular binding protein [Staphylococcus
aureus subsp. aureus CGS00]
gi|417889005|ref|ZP_12533104.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21195]
gi|417904216|ref|ZP_12548046.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21269]
gi|418566398|ref|ZP_13130779.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21264]
gi|418581739|ref|ZP_13145819.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIG1605]
gi|418597618|ref|ZP_13161142.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21342]
gi|418891655|ref|ZP_13445772.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIG1176]
gi|418897429|ref|ZP_13451502.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIGC341D]
gi|418900317|ref|ZP_13454375.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIG1214]
gi|418908809|ref|ZP_13462814.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIG149]
gi|418916893|ref|ZP_13470852.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIG1267]
gi|418922681|ref|ZP_13476598.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIG1233]
gi|418950472|ref|ZP_13502646.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus IS-160]
gi|418981932|ref|ZP_13529644.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIG1242]
gi|418985473|ref|ZP_13533161.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIG1500]
gi|49241394|emb|CAG40078.1| ABC transporter extracellular binding protein [Staphylococcus
aureus subsp. aureus MRSA252]
gi|257272130|gb|EEV04262.1| ABC transporter extracellular binding protein [Staphylococcus
aureus subsp. aureus 55/2053]
gi|257278580|gb|EEV09199.1| ABC transporter extracellular binding protein [Staphylococcus
aureus subsp. aureus 68-397]
gi|257281247|gb|EEV11384.1| ABC transporter extracellular binding protein [Staphylococcus
aureus subsp. aureus E1410]
gi|257284335|gb|EEV14455.1| ABC transporter extracellular binding protein [Staphylococcus
aureus subsp. aureus M876]
gi|282313895|gb|EFB44287.1| spermidine/putrescine transport system substrate-binding protein
[Staphylococcus aureus subsp. aureus C101]
gi|282321945|gb|EFB52269.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Staphylococcus
aureus subsp. aureus M899]
gi|282325284|gb|EFB55593.1| ABC transporter extracellular binding protein [Staphylococcus
aureus subsp. aureus WBG10049]
gi|282328057|gb|EFB58339.1| ABC transporter extracellular binding protein [Staphylococcus
aureus subsp. aureus WW2703/97]
gi|282330712|gb|EFB60226.1| spermidine/putrescine transport system substrate-binding protein
[Staphylococcus aureus subsp. aureus Btn1260]
gi|282595269|gb|EFC00233.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Staphylococcus
aureus subsp. aureus C160]
gi|283789995|gb|EFC28812.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Staphylococcus
aureus subsp. aureus A017934/97]
gi|290920528|gb|EFD97591.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Staphylococcus
aureus subsp. aureus M1015]
gi|291095919|gb|EFE26180.1| spermidine/putrescine transport system substrate-binding protein
[Staphylococcus aureus subsp. aureus 58-424]
gi|291467320|gb|EFF09837.1| ABC transporter extracellular binding protein [Staphylococcus
aureus subsp. aureus M809]
gi|295127948|gb|EFG57582.1| spermidine/putrescine transport system substrate-binding protein
[Staphylococcus aureus subsp. aureus EMRSA16]
gi|297576342|gb|EFH95058.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Staphylococcus aureus
subsp. aureus MN8]
gi|298694337|gb|ADI97559.1| spermidine/putrescine-binding periplasmic protein precursor
[Staphylococcus aureus subsp. aureus ED133]
gi|312438521|gb|ADQ77592.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Staphylococcus aureus
subsp. aureus TCH60]
gi|315193770|gb|EFU24165.1| ABC transporter extracellular binding protein [Staphylococcus
aureus subsp. aureus CGS00]
gi|341848039|gb|EGS89208.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21269]
gi|341853073|gb|EGS93955.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21195]
gi|359830118|gb|AEV78096.1| ABC transporter, periplasmic spermidineputrescine-binding protein
PotD [Staphylococcus aureus subsp. aureus M013]
gi|371970611|gb|EHO88028.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21264]
gi|374393991|gb|EHQ65287.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21342]
gi|375376912|gb|EHS80414.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus IS-160]
gi|377704044|gb|EHT28355.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIG1214]
gi|377706188|gb|EHT30488.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIG1242]
gi|377706533|gb|EHT30829.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIG1500]
gi|377711289|gb|EHT35522.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIG1605]
gi|377732612|gb|EHT56663.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIG1176]
gi|377736004|gb|EHT60034.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIG1233]
gi|377750067|gb|EHT74005.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIG1267]
gi|377754805|gb|EHT78711.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIG149]
gi|377762208|gb|EHT86077.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIGC341D]
Length = 357
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 68/149 (45%), Gaps = 17/149 (11%)
Query: 230 RGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVI-VAG 288
+G ++ PY +GT+ I Y K K+ N + + WK + P+ +I +V+ RE+I ++
Sbjct: 128 KGNKYSLPYFFGTVGILYNKEKYPNESF---DSWKSLYNPKFKNQILLVDGAREIIGMSL 184
Query: 289 GKIA-------------VQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAV 335
K+ +++L LA QVR + +AV WS P V
Sbjct: 185 NKLGYNLNDRNSHHLKEAERDLTKLAPQVRGVVGDEITMMLEQNEGNIAVVWSGVAAPLV 244
Query: 336 KRMSNVAVVVPKSGASLWADLWAIPAASR 364
+ V+PK G++LW D IP ++
Sbjct: 245 QEGDKYNYVIPKEGSNLWFDNMVIPKTAQ 273
>gi|282916352|ref|ZP_06324114.1| spermidine/putrescine transport system substrate-binding protein
[Staphylococcus aureus subsp. aureus D139]
gi|283770164|ref|ZP_06343056.1| spermidine/putrescine transport system substrate-binding protein
[Staphylococcus aureus subsp. aureus H19]
gi|282319792|gb|EFB50140.1| spermidine/putrescine transport system substrate-binding protein
[Staphylococcus aureus subsp. aureus D139]
gi|283460311|gb|EFC07401.1| spermidine/putrescine transport system substrate-binding protein
[Staphylococcus aureus subsp. aureus H19]
Length = 357
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 68/149 (45%), Gaps = 17/149 (11%)
Query: 230 RGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVI-VAG 288
+G ++ PY +GT+ I Y K K+ N + + WK + P+ +I +V+ RE+I ++
Sbjct: 128 KGNKYSLPYFFGTVGILYNKEKYPNESF---DSWKSLYNPKFKNQILLVDGAREIIGMSL 184
Query: 289 GKIA-------------VQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAV 335
K+ +++L LA QVR + +AV WS P V
Sbjct: 185 NKLGYNLNDRNSRHLKEAERDLTKLAPQVRGVVGDEITMMLEQNEGNIAVVWSGVAAPLV 244
Query: 336 KRMSNVAVVVPKSGASLWADLWAIPAASR 364
+ V+PK G++LW D IP ++
Sbjct: 245 QEGDKYNYVIPKEGSNLWFDNMVIPKTAQ 273
>gi|145628878|ref|ZP_01784678.1| spermidine/putrescine ABC transporter periplasmic-binding protein
[Haemophilus influenzae 22.1-21]
gi|144979348|gb|EDJ89034.1| spermidine/putrescine ABC transporter periplasmic-binding protein
[Haemophilus influenzae 22.1-21]
Length = 350
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 112/287 (39%), Gaps = 59/287 (20%)
Query: 138 LRVVSLQNSVPQSWVKDFMRSQG---------------KRLKFQMNLCASIDGIVNNLST 182
L V + + VP V F + G +LK N + D +V S
Sbjct: 30 LYVYNWTDYVPSDLVAQFSKETGIEVIYSTFESNEEMYAKLKLTQNTGSGYD-LVFPSSY 88
Query: 183 PFNKLSFAIKKRFIEPIAEAEDQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGT 242
NK+ IK++ ++PI DQ + K L E DP K ++ PY +G
Sbjct: 89 YVNKM---IKEKMLQPI----DQSKLTNIHQIPKHLLNK----EFDPENK-YSLPYVYGL 136
Query: 243 MAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREV----IVAGGK-------- 290
I + + I W D W PE G++ M + REV ++ GK
Sbjct: 137 TGIEVNADEI---DPKTITSWADLWKPEFKGKVLMTSDAREVFHVALLLDGKSPNTTNEE 193
Query: 291 ---IAVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPK 347
A ++ LL N V F+S + G+V + + W+ A K ++ V PK
Sbjct: 194 DIKTAYERLEKLLPN-VATFNSDSPEVPYVQGEVAIGMIWNGSAYLAQKENQSLQFVYPK 252
Query: 348 SGASLWADLWAIPAASRLETKQIGGQVRGPSPLIHQWIEFCLQTARA 394
GA W D +AIP ++ V G H++I+F L+ A
Sbjct: 253 EGAIFWMDNYAIPTTAK--------NVEGA----HKFIDFLLRPENA 287
>gi|398954833|ref|ZP_10676158.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM33]
gi|398151931|gb|EJM40464.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM33]
Length = 366
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 116/263 (44%), Gaps = 44/263 (16%)
Query: 138 LRVVSLQNSVPQSWVKDFMRSQGKRLK---FQMNLCASIDGIVNN----LSTPFNK-LSF 189
LRV + + + S KDF R G ++ F N + N L P N+ +
Sbjct: 29 LRVYNWADYILPSVPKDFARDTGIKVTWDTFDTNESLEAKLLTGNSGYDLVVPSNQFIET 88
Query: 190 AIKKRFIEPIAEAEDQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIGYKK 249
IK + + +++ +W SH+ L+ D DP G + PY +GT+ IG+
Sbjct: 89 QIKAGVFQKLDKSKLPNW----SHQDPALLKLLDKN--DP-GNQYGVPYMYGTVLIGFNP 141
Query: 250 SKFQ---NHNLAPIEDWKDPWWPE-----LAGRISMVNSPREVI-VAGGKIAVQQNL--- 297
+K + N AP++ W + PE A ++M++SP E++ +A + + N
Sbjct: 142 AKVKAALGEN-APVDSWDLVFKPENMEKLKACGVAMLDSPSEILPLALHYLGLDPNSQNP 200
Query: 298 -------ALLAN---QVRLFDSTHYLKAFGIGDVWVAVGWSSDVLP---AVKRMSNVAVV 344
AL+ V F+S Y+ GD+ VA+G+S K N VV
Sbjct: 201 DDYEKAKALMLKVRPYVTYFNSAKYMTDIANGDICVAIGYSGSFYQFGNRAKEAGNGVVV 260
Query: 345 ---VPKSGASLWADLWAIPAASR 364
+PK GA +W D +AIP +++
Sbjct: 261 DWRLPKEGAPIWFDTFAIPKSAK 283
>gi|418430079|ref|ZP_13002996.1| hypothetical protein MQE_01535 [Staphylococcus aureus subsp. aureus
VRS3a]
gi|387719144|gb|EIK07096.1| hypothetical protein MQE_01535 [Staphylococcus aureus subsp. aureus
VRS3a]
Length = 357
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 68/149 (45%), Gaps = 17/149 (11%)
Query: 230 RGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVI-VAG 288
+G ++ PY +GT+ I Y K K+ N + + WK + P+ +I +V+ RE+I ++
Sbjct: 128 KGNKYSLPYFFGTVGILYNKEKYPNESF---DSWKSLYNPKFKNQILLVDGAREIIGMSL 184
Query: 289 GKIA-------------VQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAV 335
K+ +++L LA QVR + +AV WS P V
Sbjct: 185 NKLGYNLNDRNSHHLKEAERDLTKLAPQVRGVVGDEITMMLQQNEGNIAVVWSGVAAPLV 244
Query: 336 KRMSNVAVVVPKSGASLWADLWAIPAASR 364
+ V+PK G++LW D IP ++
Sbjct: 245 QEGDKYNYVIPKEGSNLWFDNMVIPKTAQ 273
>gi|253681534|ref|ZP_04862331.1| spermidine/putrescine-binding periplasmic protein [Clostridium
botulinum D str. 1873]
gi|253561246|gb|EES90698.1| spermidine/putrescine-binding periplasmic protein [Clostridium
botulinum D str. 1873]
Length = 347
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 67/152 (44%), Gaps = 21/152 (13%)
Query: 227 IDPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVIV 286
DP+ + ++ PY WGT+ I Y ++ I+ W W P+ +I MV+S R+ I
Sbjct: 120 FDPKNQ-YSVPYMWGTVGIIYNTKLIKDK----IDSWNALWNPKYKDQILMVDSQRDAIA 174
Query: 287 A-----GGKIAVQQNLALLANQVRLFDSTHYLKAFGIGDVW----------VAVGWSSDV 331
G I L + L ++A+ +GD +AV WS D
Sbjct: 175 VALKKLGYSINTTNKGELKKAEQELMKQKPLVRAY-VGDEVKDLMVDEEGAIAVVWSGDA 233
Query: 332 LPAVKRMSNVAVVVPKSGASLWADLWAIPAAS 363
+ +K N+ V+PK G++LW D IP S
Sbjct: 234 ITMMKNNPNLRYVIPKEGSNLWFDNMVIPKGS 265
>gi|418563214|ref|ZP_13127656.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21262]
gi|371971758|gb|EHO89154.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21262]
Length = 357
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 68/149 (45%), Gaps = 17/149 (11%)
Query: 230 RGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVI-VAG 288
+G ++ PY +GT+ I Y K K+ N + + WK + P+ +I +V+ RE+I ++
Sbjct: 128 KGNKYSLPYFFGTVGILYNKEKYPNESF---DSWKSLYNPKFKNQILLVDGAREIIGMSL 184
Query: 289 GKIA-------------VQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAV 335
K+ +++L LA QVR + +AV WS P V
Sbjct: 185 NKLGYNLNDRNSHHLKEAERDLTKLAPQVRGVVGDEITMMLQQNEGNIAVVWSGVAAPLV 244
Query: 336 KRMSNVAVVVPKSGASLWADLWAIPAASR 364
+ V+PK G++LW D IP ++
Sbjct: 245 QEGDKYNYVIPKEGSNLWFDNMVIPKTAQ 273
>gi|418296592|ref|ZP_12908435.1| putrescine ABC transporter substrate-binding protein [Agrobacterium
tumefaciens CCNWGS0286]
gi|355538767|gb|EHH08009.1| putrescine ABC transporter substrate-binding protein [Agrobacterium
tumefaciens CCNWGS0286]
Length = 365
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 73/168 (43%), Gaps = 37/168 (22%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQNH-NLAPIEDWKDPWWPELAGR-----ISMVNSP 281
DP G +A Y WGT IGY +K + P++ W + PE A + I+++++
Sbjct: 121 DP-GNEYAVNYMWGTTGIGYNVAKVKAALGDVPVDSWDILFKPENAEKLKSCGINILDAS 179
Query: 282 REVIV-------------------AGGKIAVQQNLALLANQVRLFDSTHYLKAFGIGDVW 322
E AGG++ + + V+ F+S+ Y+ GD
Sbjct: 180 DETFAIAMNYLGKNPDSKETADLEAGGEV-----YSKIRPFVKTFNSSAYIDELANGDSC 234
Query: 323 VAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
+ +GWS D+L A R V ++PK G +W D AIPA ++
Sbjct: 235 ITIGWSGDILQAKSRAEEAKNGVEVNYIIPKEGTYMWFDNLAIPADAK 282
>gi|258423602|ref|ZP_05686492.1| ABC transporter extracellular binding protein [Staphylococcus
aureus A9635]
gi|418308093|ref|ZP_12919750.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21194]
gi|418559168|ref|ZP_13123714.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21252]
gi|418888895|ref|ZP_13443031.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIG1524]
gi|257846303|gb|EEV70327.1| ABC transporter extracellular binding protein [Staphylococcus
aureus A9635]
gi|365241826|gb|EHM82560.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21194]
gi|371975459|gb|EHO92753.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21252]
gi|377754405|gb|EHT78314.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIG1524]
Length = 357
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 68/149 (45%), Gaps = 17/149 (11%)
Query: 230 RGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVI-VAG 288
+G ++ PY +GT+ I Y K K+ N + + WK + P+ +I +V+ RE+I ++
Sbjct: 128 KGNKYSLPYFFGTVGILYNKEKYPNESF---DSWKSLYNPKFKNQILLVDGAREIIGMSL 184
Query: 289 GKIA-------------VQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAV 335
K+ +++L LA QVR + +AV WS P V
Sbjct: 185 NKLGYNLNDRNSHHLKEAERDLTKLAPQVRGVVGDEITMMLEQNEGNIAVVWSGVAAPLV 244
Query: 336 KRMSNVAVVVPKSGASLWADLWAIPAASR 364
+ V+PK G++LW D IP ++
Sbjct: 245 QEGDKYNYVIPKEGSNLWFDNMVIPKTAQ 273
>gi|15924092|ref|NP_371626.1| spermidine/putrescine-binding protein -like protein [Staphylococcus
aureus subsp. aureus Mu50]
gi|15926687|ref|NP_374220.1| hypothetical protein SA0953 [Staphylococcus aureus subsp. aureus
N315]
gi|148267595|ref|YP_001246538.1| extracellular solute-binding protein [Staphylococcus aureus subsp.
aureus JH9]
gi|150393650|ref|YP_001316325.1| extracellular solute-binding protein [Staphylococcus aureus subsp.
aureus JH1]
gi|156979425|ref|YP_001441684.1| spermidine/putrescine-binding protein precursor-like protein
[Staphylococcus aureus subsp. aureus Mu3]
gi|255005889|ref|ZP_05144490.2| spermidine/putrescine-binding protein precursor-like protein
[Staphylococcus aureus subsp. aureus Mu50-omega]
gi|257795167|ref|ZP_05644146.1| conserved hypothetical protein [Staphylococcus aureus A9781]
gi|258407124|ref|ZP_05680273.1| conserved hypothetical protein [Staphylococcus aureus A9763]
gi|258421784|ref|ZP_05684705.1| spermidine/putrescine-binding periplasmic protein [Staphylococcus
aureus A9719]
gi|258443363|ref|ZP_05691706.1| potD protein [Staphylococcus aureus A8115]
gi|258444973|ref|ZP_05693290.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Staphylococcus
aureus A6300]
gi|258449852|ref|ZP_05697950.1| spermidine/putrescine ABC transporter [Staphylococcus aureus A6224]
gi|258454951|ref|ZP_05702914.1| spermidine/putrescine-binding periplasmic protein potD
[Staphylococcus aureus A5937]
gi|269202713|ref|YP_003281982.1| spermidine/putrescine ABC transporter, spermidine [Staphylococcus
aureus subsp. aureus ED98]
gi|282894129|ref|ZP_06302360.1| spermidine/putrescine transport system substrate-binding protein
[Staphylococcus aureus A8117]
gi|282928624|ref|ZP_06336221.1| spermidine/putrescine transport system substrate-binding protein
[Staphylococcus aureus A10102]
gi|295405906|ref|ZP_06815715.1| hypothetical protein SMAG_01064 [Staphylococcus aureus A8819]
gi|296276503|ref|ZP_06859010.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Staphylococcus
aureus subsp. aureus MR1]
gi|297246376|ref|ZP_06930220.1| spermidine/putrescine transport system substrate-binding protein
[Staphylococcus aureus A8796]
gi|384864329|ref|YP_005749688.1| extracellular solute-binding family protein [Staphylococcus aureus
subsp. aureus ECT-R 2]
gi|387150244|ref|YP_005741808.1| ABC transporter, periplasmic spermidine putrescine-binding protein
potD [Staphylococcus aureus 04-02981]
gi|415691940|ref|ZP_11454006.1| hypothetical protein CGSSa03_02788 [Staphylococcus aureus subsp.
aureus CGS03]
gi|416839739|ref|ZP_11903097.1| spermidine/putrescine-binding periplasmic protein precursor
[Staphylococcus aureus O11]
gi|416848398|ref|ZP_11907741.1| spermidine/putrescine-binding periplasmic protein precursor
[Staphylococcus aureus O46]
gi|417652145|ref|ZP_12301898.1| putative spermidine/putrescine ABC transporter protein
[Staphylococcus aureus subsp. aureus 21172]
gi|417800731|ref|ZP_12447840.1| putative spermidine/putrescine ABC transporter [Staphylococcus
aureus subsp. aureus 21318]
gi|417894254|ref|ZP_12538276.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21201]
gi|418321797|ref|ZP_12933136.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus VCU006]
gi|418424241|ref|ZP_12997366.1| hypothetical protein MQA_01681 [Staphylococcus aureus subsp. aureus
VRS1]
gi|418427168|ref|ZP_13000183.1| hypothetical protein MQC_01406 [Staphylococcus aureus subsp. aureus
VRS2]
gi|418433038|ref|ZP_13005820.1| hypothetical protein MQG_01447 [Staphylococcus aureus subsp. aureus
VRS4]
gi|418436702|ref|ZP_13008507.1| spermidine/putrescine ABC transporter [Staphylococcus aureus subsp.
aureus VRS5]
gi|418439580|ref|ZP_13011290.1| spermidine/putrescine ABC transporter [Staphylococcus aureus subsp.
aureus VRS6]
gi|418442625|ref|ZP_13014229.1| hypothetical protein MQM_00621 [Staphylococcus aureus subsp. aureus
VRS7]
gi|418445690|ref|ZP_13017170.1| spermidine/putrescine ABC transporter [Staphylococcus aureus subsp.
aureus VRS8]
gi|418448640|ref|ZP_13020034.1| spermidine/putrescine ABC transporter [Staphylococcus aureus subsp.
aureus VRS9]
gi|418451446|ref|ZP_13022782.1| spermidine/putrescine ABC transporter [Staphylococcus aureus subsp.
aureus VRS10]
gi|418454521|ref|ZP_13025784.1| spermidine/putrescine ABC transporter [Staphylococcus aureus subsp.
aureus VRS11a]
gi|418457395|ref|ZP_13028600.1| spermidine/putrescine ABC transporter [Staphylococcus aureus subsp.
aureus VRS11b]
gi|418568105|ref|ZP_13132459.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21272]
gi|418639784|ref|ZP_13202025.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus IS-3]
gi|418653105|ref|ZP_13215051.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus IS-99]
gi|418662610|ref|ZP_13224153.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus IS-122]
gi|418875036|ref|ZP_13429298.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIGC93]
gi|418877941|ref|ZP_13432177.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIG1165]
gi|418880777|ref|ZP_13434996.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIG1213]
gi|418883704|ref|ZP_13437901.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIG1769]
gi|418886362|ref|ZP_13440511.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIG1150]
gi|418894554|ref|ZP_13448652.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIG1057]
gi|418914198|ref|ZP_13468170.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIGC340D]
gi|418919949|ref|ZP_13473889.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIGC348]
gi|418931087|ref|ZP_13484934.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIG1750]
gi|418990963|ref|ZP_13538624.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIG1096]
gi|419784831|ref|ZP_14310592.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus IS-M]
gi|424777737|ref|ZP_18204696.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus CM05]
gi|443635803|ref|ZP_21119925.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21236]
gi|13700903|dbj|BAB42199.1| potD [Staphylococcus aureus subsp. aureus N315]
gi|14246872|dbj|BAB57264.1| spermidine/putrescine-binding protein precursor homolog
[Staphylococcus aureus subsp. aureus Mu50]
gi|147740664|gb|ABQ48962.1| extracellular solute-binding protein, family 1 [Staphylococcus
aureus subsp. aureus JH9]
gi|149946102|gb|ABR52038.1| extracellular solute-binding protein family 1 [Staphylococcus
aureus subsp. aureus JH1]
gi|156721560|dbj|BAF77977.1| spermidine/putrescine-binding protein precursor homolog
[Staphylococcus aureus subsp. aureus Mu3]
gi|257789139|gb|EEV27479.1| conserved hypothetical protein [Staphylococcus aureus A9781]
gi|257841279|gb|EEV65724.1| conserved hypothetical protein [Staphylococcus aureus A9763]
gi|257842117|gb|EEV66545.1| spermidine/putrescine-binding periplasmic protein [Staphylococcus
aureus A9719]
gi|257851453|gb|EEV75392.1| potD protein [Staphylococcus aureus A8115]
gi|257856095|gb|EEV79013.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Staphylococcus
aureus A6300]
gi|257856772|gb|EEV79675.1| spermidine/putrescine ABC transporter [Staphylococcus aureus A6224]
gi|257862831|gb|EEV85596.1| spermidine/putrescine-binding periplasmic protein potD
[Staphylococcus aureus A5937]
gi|262075003|gb|ACY10976.1| spermidine/putrescine ABC transporter, spermidine [Staphylococcus
aureus subsp. aureus ED98]
gi|282589663|gb|EFB94749.1| spermidine/putrescine transport system substrate-binding protein
[Staphylococcus aureus A10102]
gi|282763615|gb|EFC03744.1| spermidine/putrescine transport system substrate-binding protein
[Staphylococcus aureus A8117]
gi|285816783|gb|ADC37270.1| ABC transporter, periplasmic spermidine putrescine-binding protein
potD [Staphylococcus aureus 04-02981]
gi|294969341|gb|EFG45361.1| hypothetical protein SMAG_01064 [Staphylococcus aureus A8819]
gi|297176742|gb|EFH36002.1| spermidine/putrescine transport system substrate-binding protein
[Staphylococcus aureus A8796]
gi|312829496|emb|CBX34338.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus ECT-R 2]
gi|315130312|gb|EFT86299.1| hypothetical protein CGSSa03_02788 [Staphylococcus aureus subsp.
aureus CGS03]
gi|323440651|gb|EGA98361.1| spermidine/putrescine-binding periplasmic protein precursor
[Staphylococcus aureus O11]
gi|323441678|gb|EGA99324.1| spermidine/putrescine-binding periplasmic protein precursor
[Staphylococcus aureus O46]
gi|329725165|gb|EGG61654.1| putative spermidine/putrescine ABC transporter protein
[Staphylococcus aureus subsp. aureus 21172]
gi|334277733|gb|EGL95956.1| putative spermidine/putrescine ABC transporter [Staphylococcus
aureus subsp. aureus 21318]
gi|341852761|gb|EGS93645.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21201]
gi|365224412|gb|EHM65677.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus VCU006]
gi|371980787|gb|EHO97988.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21272]
gi|375016796|gb|EHS10431.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus IS-3]
gi|375019817|gb|EHS13368.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus IS-99]
gi|375035997|gb|EHS29088.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus IS-122]
gi|377695555|gb|EHT19916.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIG1165]
gi|377695907|gb|EHT20264.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIG1057]
gi|377715438|gb|EHT39628.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIG1769]
gi|377715924|gb|EHT40110.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIG1750]
gi|377723085|gb|EHT47210.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIG1096]
gi|377726544|gb|EHT50655.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIG1150]
gi|377731670|gb|EHT55723.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIG1213]
gi|377757700|gb|EHT81588.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIGC340D]
gi|377766948|gb|EHT90772.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIGC348]
gi|377771081|gb|EHT94839.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIGC93]
gi|383363675|gb|EID41003.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus IS-M]
gi|387719583|gb|EIK07525.1| hypothetical protein MQC_01406 [Staphylococcus aureus subsp. aureus
VRS2]
gi|387720828|gb|EIK08727.1| hypothetical protein MQA_01681 [Staphylococcus aureus subsp. aureus
VRS1]
gi|387725904|gb|EIK13495.1| hypothetical protein MQG_01447 [Staphylococcus aureus subsp. aureus
VRS4]
gi|387728551|gb|EIK16038.1| spermidine/putrescine ABC transporter [Staphylococcus aureus subsp.
aureus VRS5]
gi|387731067|gb|EIK18407.1| spermidine/putrescine ABC transporter [Staphylococcus aureus subsp.
aureus VRS6]
gi|387736676|gb|EIK23765.1| spermidine/putrescine ABC transporter [Staphylococcus aureus subsp.
aureus VRS8]
gi|387738217|gb|EIK25270.1| hypothetical protein MQM_00621 [Staphylococcus aureus subsp. aureus
VRS7]
gi|387738316|gb|EIK25360.1| spermidine/putrescine ABC transporter [Staphylococcus aureus subsp.
aureus VRS9]
gi|387745418|gb|EIK32173.1| spermidine/putrescine ABC transporter [Staphylococcus aureus subsp.
aureus VRS10]
gi|387745982|gb|EIK32727.1| spermidine/putrescine ABC transporter [Staphylococcus aureus subsp.
aureus VRS11a]
gi|387747953|gb|EIK34652.1| spermidine/putrescine ABC transporter [Staphylococcus aureus subsp.
aureus VRS11b]
gi|402346417|gb|EJU81507.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus CM05]
gi|408423334|emb|CCJ10745.1| Spermidine/putrescine-binding protein homolog [Staphylococcus
aureus subsp. aureus ST228]
gi|408425324|emb|CCJ12711.1| Spermidine/putrescine-binding protein homolog [Staphylococcus
aureus subsp. aureus ST228]
gi|408427312|emb|CCJ14675.1| Spermidine/putrescine-binding protein homolog [Staphylococcus
aureus subsp. aureus ST228]
gi|408429299|emb|CCJ26464.1| Spermidine/putrescine-binding protein homolog [Staphylococcus
aureus subsp. aureus ST228]
gi|408431287|emb|CCJ18602.1| Spermidine/putrescine-binding protein homolog [Staphylococcus
aureus subsp. aureus ST228]
gi|408433281|emb|CCJ20566.1| Spermidine/putrescine-binding protein homolog [Staphylococcus
aureus subsp. aureus ST228]
gi|408435272|emb|CCJ22532.1| Spermidine/putrescine-binding protein homolog [Staphylococcus
aureus subsp. aureus ST228]
gi|408437257|emb|CCJ24500.1| Spermidine/putrescine-binding protein homolog [Staphylococcus
aureus subsp. aureus ST228]
gi|443408862|gb|ELS67373.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21236]
Length = 357
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 68/149 (45%), Gaps = 17/149 (11%)
Query: 230 RGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVI-VAG 288
+G ++ PY +GT+ I Y K K+ N + + WK + P+ +I +V+ RE+I ++
Sbjct: 128 KGNKYSLPYFFGTVGILYNKEKYPNESF---DSWKSLYNPKFKNQILLVDGAREIIGMSL 184
Query: 289 GKIA-------------VQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAV 335
K+ +++L LA QVR + +AV WS P V
Sbjct: 185 NKLGYNLNDRNSHHLKEAERDLTKLAPQVRGVVGDEITMMLQQNEGNIAVVWSGVAAPLV 244
Query: 336 KRMSNVAVVVPKSGASLWADLWAIPAASR 364
+ V+PK G++LW D IP ++
Sbjct: 245 QEGDKYNYVIPKEGSNLWFDNMVIPKTAQ 273
>gi|451984065|ref|ZP_21932324.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Pseudomonas aeruginosa 18A]
gi|451758301|emb|CCQ84847.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Pseudomonas aeruginosa 18A]
Length = 367
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 72/162 (44%), Gaps = 27/162 (16%)
Query: 226 EIDPRGKIWAAPYRWGTMAIGYK--KSKFQNHNLAPIEDWKDPWWPELAGR-----ISMV 278
E+ G A PY WGT+ IGY K K + AP++ W + PE + +S +
Sbjct: 119 EVSDPGNEHAIPYMWGTIGIGYNPDKVKAAFGDNAPVDSWDLVFKPENIQKLKQCGVSFL 178
Query: 279 NSPREVIVAG-------------GKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVA 324
+SP E++ A ++ + L L + V F S+ Y+ G++ VA
Sbjct: 179 DSPTEILPAALHYLGYKPDTDNPKELKAAEELFLKIRPYVTYFHSSKYISDLANGNICVA 238
Query: 325 VGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIP 360
+G+S D+ A R V +PK GA + D+ AIP
Sbjct: 239 IGYSGDIYQAKSRAEEAKNKVTVKYNIPKEGAGSFFDMVAIP 280
>gi|418993721|ref|ZP_13541358.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIG290]
gi|377746880|gb|EHT70850.1| bacterial extracellular solute-binding family protein
[Staphylococcus aureus subsp. aureus CIG290]
Length = 357
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 68/149 (45%), Gaps = 17/149 (11%)
Query: 230 RGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVI-VAG 288
+G ++ PY +GT+ I Y K K+ N + + WK + P+ +I +V+ RE+I ++
Sbjct: 128 KGNKYSLPYFFGTVGILYNKEKYPNESF---DSWKSLYNPKFKNQILLVDGAREIIGMSL 184
Query: 289 GKIA-------------VQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAV 335
K+ +++L LA QVR + +AV WS P V
Sbjct: 185 NKLGYNLNDRNSHHLKEAERDLTKLAPQVRGVVGDEITMMLEQNEGNIAVVWSGVAAPLV 244
Query: 336 KRMSNVAVVVPKSGASLWADLWAIPAASR 364
+ V+PK G++LW D IP ++
Sbjct: 245 QEGDKYNYVIPKEGSNLWFDNMVIPKTAQ 273
>gi|293366910|ref|ZP_06613585.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Staphylococcus epidermidis
M23864:W2(grey)]
gi|417659499|ref|ZP_12309101.1| putative spermidine/putrescine ABC transporter [Staphylococcus
epidermidis VCU045]
gi|417909087|ref|ZP_12552833.1| ABC transporter, solute-binding protein [Staphylococcus epidermidis
VCU037]
gi|420222085|ref|ZP_14727009.1| ABC transporter, solute-binding protein [Staphylococcus epidermidis
NIH08001]
gi|420224946|ref|ZP_14729783.1| ABC transporter, solute-binding protein [Staphylococcus epidermidis
NIH06004]
gi|420229238|ref|ZP_14733945.1| ABC transporter, solute-binding protein [Staphylococcus epidermidis
NIH04003]
gi|291318885|gb|EFE59256.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Staphylococcus epidermidis
M23864:W2(grey)]
gi|329735524|gb|EGG71812.1| putative spermidine/putrescine ABC transporter [Staphylococcus
epidermidis VCU045]
gi|341654281|gb|EGS78029.1| ABC transporter, solute-binding protein [Staphylococcus epidermidis
VCU037]
gi|394289704|gb|EJE33579.1| ABC transporter, solute-binding protein [Staphylococcus epidermidis
NIH08001]
gi|394294086|gb|EJE37776.1| ABC transporter, solute-binding protein [Staphylococcus epidermidis
NIH06004]
gi|394299506|gb|EJE43054.1| ABC transporter, solute-binding protein [Staphylococcus epidermidis
NIH04003]
Length = 357
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 67/151 (44%), Gaps = 18/151 (11%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVIVA 287
DP + ++ PY +GT+ I Y K K+ N + W+D + + I +V+ RE+I
Sbjct: 127 DPNNR-YSIPYFFGTVGILYDKEKYPNETF---DSWEDLYHSQFKNDILLVDGAREIIGM 182
Query: 288 G-GKIA-------------VQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLP 333
G K+ +++L LA QVR + VAV WS P
Sbjct: 183 GLNKLGYSLNDKNPTHIYQAEKDLHNLAPQVRGIVGDEITMMLQQNEGHVAVVWSGVAAP 242
Query: 334 AVKRMSNVAVVVPKSGASLWADLWAIPAASR 364
V+ + V+PK G++LW D IP ++
Sbjct: 243 LVQENTRYNYVIPKEGSNLWFDNMVIPKTAQ 273
>gi|218890165|ref|YP_002439029.1| polyamine transport protein PotD [Pseudomonas aeruginosa LESB58]
gi|218770388|emb|CAW26153.1| polyamine transport protein PotD [Pseudomonas aeruginosa LESB58]
Length = 354
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 99/228 (43%), Gaps = 42/228 (18%)
Query: 219 LRSNDAGEIDP---RGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWK---DPWWPE-L 271
L + AG +D +G ++ PY + T +GY K++ + P DW DP E +
Sbjct: 101 LNNEAAGYLDKDFDKGNRYSLPYAFTTTLVGYNKTELDKLGIDP-ADWSVIFDPAVLEKI 159
Query: 272 AGRISMVNSPREVIVAGGKIAVQ-------------QNLALLANQV-RLFDSTHYLKAFG 317
GR+++++ P+E+ A K Q L L A F+S+ Y+K
Sbjct: 160 KGRVTVMDDPQELFGAALKYLGHSANDTDPQHWKEAQALILAAKPYWAAFNSSSYIKELT 219
Query: 318 IGDVWVAVGWSSDVL------PAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIG 371
+G++WVA G+SSD+ A R V +P+ GA L D I S
Sbjct: 220 LGNIWVAHGYSSDMYQARADAEAAGRAFKVDFALPRQGAVLAIDNMVIHKGS-------- 271
Query: 372 GQVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALESTLVKLPE 419
+ P L +++I+F L A ++ G +P+A +K PE
Sbjct: 272 ---KNPD-LAYRFIDFMLDGRNASELTNQIGTG-TPNAAALPFIK-PE 313
>gi|395649101|ref|ZP_10436951.1| putrescine ABC transporter substrate-binding periplasmic protein
[Pseudomonas extremaustralis 14-3 substr. 14-3b]
Length = 364
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 70/164 (42%), Gaps = 37/164 (22%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN-HNLAPIEDWKDPWWPELAGR-----ISMVNSP 281
DP G +A PY WGT IGY K + + I+ W + PE + +S ++S
Sbjct: 120 DP-GNQYAVPYLWGTNGIGYNVEKVKAVLGVDKIDSWAVLFEPENMKKLASCGVSFMDSA 178
Query: 282 REVIVAGGKIAVQQNLALLANQ-------------------VRLFDSTHYLKAFGIGDVW 322
E++ A V + L N V F S+ Y+ G++
Sbjct: 179 DEMLPA-----VLNYMGLNPNSTNPEDYKKAEAKLLKVRPYVTYFHSSKYISDLANGNIC 233
Query: 323 VAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIP 360
VA G+S DV A R S N+A +PK G +LW D+ AIP
Sbjct: 234 VAAGFSGDVFQAKARASEAGKGVNIAYAIPKEGGNLWFDVLAIP 277
>gi|331002938|ref|ZP_08326451.1| hypothetical protein HMPREF0491_01313 [Lachnospiraceae oral taxon
107 str. F0167]
gi|330413231|gb|EGG92605.1| hypothetical protein HMPREF0491_01313 [Lachnospiraceae oral taxon
107 str. F0167]
Length = 361
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 70/161 (43%), Gaps = 25/161 (15%)
Query: 224 AGEIDPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPRE 283
A DP K +AAPY WGT+ I Y S + I W D W P+ G I M +S R+
Sbjct: 124 AKSFDPENK-YAAPYTWGTVGILYNTSMIDDE----ITSWGDLWNPKYQGNILMQDSVRD 178
Query: 284 VIVAGGK-----IAVQQNLALLANQVRLFDSTHYLKAFGI---------GDVWVAVGWSS 329
+ G K I L + +L + ++A+ + G+ + V +S
Sbjct: 179 AFMVGEKLLGYSINTTDKAELEKVKEKLIEQKPLVQAYVVDQVRDKMIGGEAAIGVIYSG 238
Query: 330 DVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
++L ++ + V+PK G ++W D W IP ++
Sbjct: 239 EMLYVQNEVAKSGEDFELKYVIPKEGTNVWMDAWVIPKNAK 279
>gi|387602375|ref|YP_005733896.1| ABC transporter extracellular binding protein [Staphylococcus
aureus subsp. aureus ST398]
gi|404478439|ref|YP_006709869.1| ABC transporter extracellular binding protein [Staphylococcus
aureus 08BA02176]
gi|418309901|ref|ZP_12921452.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21331]
gi|283470313|emb|CAQ49524.1| ABC transporter extracellular binding protein [Staphylococcus
aureus subsp. aureus ST398]
gi|365238024|gb|EHM78863.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21331]
gi|404439928|gb|AFR73121.1| ABC transporter extracellular binding protein [Staphylococcus
aureus 08BA02176]
Length = 357
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 68/149 (45%), Gaps = 17/149 (11%)
Query: 230 RGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVI-VAG 288
+G ++ PY +GT+ I Y K K+ N + + WK + P+ +I +V+ RE+I ++
Sbjct: 128 KGNKYSLPYFFGTVGILYNKEKYPNESF---DSWKSLYNPKFKNQILLVDGAREIIGMSL 184
Query: 289 GKIA-------------VQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAV 335
K+ +++L LA QVR + +AV WS P V
Sbjct: 185 NKLGYNLNDRNSHHLKEAERDLTKLAPQVRGVVGDEITMMLQQNEGNIAVVWSGVAAPLV 244
Query: 336 KRMSNVAVVVPKSGASLWADLWAIPAASR 364
+ V+PK G++LW D IP ++
Sbjct: 245 QEGDKYNYVIPKEGSNLWFDNMVIPKTAQ 273
>gi|282918801|ref|ZP_06326536.1| spermidine/putrescine transport system substrate-binding protein
[Staphylococcus aureus subsp. aureus C427]
gi|282316611|gb|EFB46985.1| spermidine/putrescine transport system substrate-binding protein
[Staphylococcus aureus subsp. aureus C427]
Length = 357
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 68/149 (45%), Gaps = 17/149 (11%)
Query: 230 RGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVI-VAG 288
+G ++ PY +GT+ I Y K K+ N + + WK + P+ +I +V+ RE+I ++
Sbjct: 128 KGNKYSLPYFFGTVGILYNKEKYPNESF---DSWKSLYNPKFKNQILLVDGAREIIGMSL 184
Query: 289 GKIA-------------VQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAV 335
K+ +++L LA QVR + +AV WS P V
Sbjct: 185 NKLGYNLNDRNSHHLKEAERDLTKLAPQVRGVVGDEITMMLEQNEGNIAVVWSGVAAPLV 244
Query: 336 KRMSNVAVVVPKSGASLWADLWAIPAASR 364
+ V+PK G++LW D IP ++
Sbjct: 245 QEGDKYNYVIPKEGSNLWFDNMVIPKTAQ 273
>gi|395647571|ref|ZP_10435421.1| periplasmic putrescine-binding protein, PotF family [Pseudomonas
extremaustralis 14-3 substr. 14-3b]
Length = 359
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 72/161 (44%), Gaps = 28/161 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGRIS------MVN 279
DP G PY WG+ IGY K + + AP++ W + PE ++S + N
Sbjct: 114 DP-GNAHGFPYLWGSTGIGYNIDKVKAVLGDNAPVDSWDLIFKPEYMEKLSKCGVAILDN 172
Query: 280 SPREVIVAGGKIAV----------QQNLALLAN---QVRLFDSTHYLKAFGIGDVWVAVG 326
P + +A + + ++ ALL V F S+ Y GD+ VAVG
Sbjct: 173 GPELLPIALNYLGLPPHSKKPDDYKKAEALLMKVRPYVAYFHSSKYTGDLANGDICVAVG 232
Query: 327 WSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIPA 361
+S DVL A R + +PK GA++W D+ A+PA
Sbjct: 233 FSGDVLQAESRAKEAKNGVKIGYQIPKEGAAIWFDMVAMPA 273
>gi|333394556|ref|ZP_08476375.1| spermidine/putrescine-binding periplasmic protein [Lactobacillus
coryniformis subsp. coryniformis KCTC 3167]
gi|420145444|ref|ZP_14652910.1| Spermidine/putrescine-binding periplasmic protein [Lactobacillus
coryniformis subsp. coryniformis CECT 5711]
gi|398402939|gb|EJN56224.1| Spermidine/putrescine-binding periplasmic protein [Lactobacillus
coryniformis subsp. coryniformis CECT 5711]
Length = 357
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 75/160 (46%), Gaps = 34/160 (21%)
Query: 227 IDPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREV-- 284
DP+ + ++ PY WGT+ I Y Q N + I+ W D W P+L I +V+S R++
Sbjct: 126 FDPQNR-YSVPYFWGTLGIIYND---QMINGSQIQHWNDLWSPKLRNNIMLVDSARDIMG 181
Query: 285 --IVAGGKIAVQQNLA------------------LLANQVRLFDSTHYLKAFGIGDVWVA 324
+++ G N+A ++A++++++ + + + VA
Sbjct: 182 MALISQGHSVNTTNIAELEQAKLKLEGLMPNVKAVVADEIKMYMAQN--------EAAVA 233
Query: 325 VGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 364
V WS + + S++ VVP G++LW D IP ++
Sbjct: 234 VTWSGEAAEMMANNSHLHYVVPTEGSNLWFDNLVIPKTAK 273
>gi|416874859|ref|ZP_11918408.1| polyamine ABC transporter [Pseudomonas aeruginosa 152504]
gi|334842601|gb|EGM21205.1| polyamine ABC transporter [Pseudomonas aeruginosa 152504]
Length = 354
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 95/218 (43%), Gaps = 41/218 (18%)
Query: 219 LRSNDAGEIDP---RGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWK---DPWWPE-L 271
L + AG +D +G ++ PY + T +GY K++ + P DW DP E +
Sbjct: 101 LSNEAAGYLDKDFDKGNRYSLPYAFTTTLVGYNKTELDKLGIDP-ADWSVIFDPAVLEKI 159
Query: 272 AGRISMVNSPREVIVAGGKIAVQ-------------QNLALLANQV-RLFDSTHYLKAFG 317
GR+++++ P+E+ A K Q L L A F+S+ Y+K
Sbjct: 160 KGRVTVMDDPQELFGAALKYLGHSANDTDPQHWKEAQTLILAAKPYWAAFNSSSYIKELT 219
Query: 318 IGDVWVAVGWSSDVL------PAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIG 371
+G++WVA G+SSD+ A R V +P+ GA L D I S
Sbjct: 220 LGNIWVAHGYSSDMYQARADAEAAGRAFKVDFALPRQGAVLAIDNMVIHKGS-------- 271
Query: 372 GQVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSA 409
+ P L +++I+F L A ++ G +P+A
Sbjct: 272 ---KNPD-LAYRFIDFMLDGRNASELTNQIGTG-TPNA 304
>gi|418602598|ref|ZP_13165997.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21345]
gi|374394945|gb|EHQ66220.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21345]
Length = 357
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 68/149 (45%), Gaps = 17/149 (11%)
Query: 230 RGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVI-VAG 288
+G ++ PY +GT+ I Y K K+ N + + WK + P+ +I +V+ RE+I ++
Sbjct: 128 KGNKYSLPYFFGTVGILYNKEKYPNESF---DSWKSLYNPKFKNQILLVDGAREIIGMSL 184
Query: 289 GKIA-------------VQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAV 335
K+ +++L LA QVR + +AV WS P V
Sbjct: 185 NKLGYNLNDRNSHHLKEAERDLTKLAPQVRGVVGDEITMILEQNEGNIAVVWSGVAAPLV 244
Query: 336 KRMSNVAVVVPKSGASLWADLWAIPAASR 364
+ V+PK G++LW D IP ++
Sbjct: 245 QEGDKYNYVIPKEGSNLWFDNMVIPKTAQ 273
>gi|418282905|ref|ZP_12895662.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21202]
gi|365168502|gb|EHM59840.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus 21202]
Length = 357
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 68/149 (45%), Gaps = 17/149 (11%)
Query: 230 RGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVI-VAG 288
+G ++ PY +GT+ I Y K K+ N + + WK + P+ +I +V+ RE+I ++
Sbjct: 128 KGNKYSLPYFFGTVGILYNKEKYPNESF---DSWKSLYNPKFKNQILLVDGAREIIGMSL 184
Query: 289 GKIA-------------VQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAV 335
K+ +++L LA QVR + +AV WS P V
Sbjct: 185 NKLGYNLNDRNSHHLKEAERDLTKLAPQVRGVVGDEITMMLEQNEGNIAVVWSGVAAPLV 244
Query: 336 KRMSNVAVVVPKSGASLWADLWAIPAASR 364
+ V+PK G++LW D IP ++
Sbjct: 245 QEGDKYNYVIPKEGSNLWFDNMVIPKTAQ 273
>gi|408479815|ref|ZP_11186034.1| putrescine/polyamine-binding periplasmic protein [Pseudomonas sp.
R81]
Length = 363
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 92/205 (44%), Gaps = 34/205 (16%)
Query: 187 LSFAIKKRFIEPIAEAEDQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIG 246
L+ I+ +P+ ++ Q+W K L K + +ND G +A PY +GT+ IG
Sbjct: 83 LAKQIEAGVFQPLDRSQLQNW-KHLDPKLMKLIEANDPGNK------FAVPYMYGTILIG 135
Query: 247 YKKSKFQNH--NLAPIEDWKDPWWPELAGR-----ISMVNSPREVI-VAGGKIAVQQN-- 296
+ K + AP++ W + E + +++++SP E++ +A + + N
Sbjct: 136 FNPDKVKAALGVNAPVDSWDLIFKEENISKLKQCGVALLDSPSEILPLALQHLGLDPNSS 195
Query: 297 -----------LALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSN----- 340
L + V F S+ Y+ GD+ VAVG+S A R +
Sbjct: 196 NPKDYAKAEALLLKIRPYVTYFHSSKYMADIANGDICVAVGYSGSFSQAANRARDAKNGV 255
Query: 341 -VAVVVPKSGASLWADLWAIPAASR 364
V + +PK GA +W D+ AIP ++
Sbjct: 256 TVDMRLPKEGAPIWFDMLAIPKGAK 280
>gi|429332185|ref|ZP_19212915.1| extracellular solute-binding protein [Pseudomonas putida CSV86]
gi|428763016|gb|EKX85201.1| extracellular solute-binding protein [Pseudomonas putida CSV86]
Length = 359
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 69/163 (42%), Gaps = 27/163 (16%)
Query: 226 EIDPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGRIS------M 277
E++ G PY WG+ IGY K + + AP++ W + PE G++ +
Sbjct: 111 EVNDPGNQHGFPYLWGSTGIGYNIDKVKAVLGDNAPVDSWDLIFKPEYIGKLKSCGVAVL 170
Query: 278 VNSPREVIVAGGKIAVQQN-------------LALLANQVRLFDSTHYLKAFGIGDVWVA 324
N P + +A + + + L + + F S+ Y GDV V
Sbjct: 171 DNGPELLPIALHYLGLPHHSQDPKDYDKAKDLLMKVRPYISYFHSSKYTGDLANGDVCVV 230
Query: 325 VGWSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIPA 361
VG+S DVL A R V +PK GA +W D+ A+PA
Sbjct: 231 VGFSGDVLQAKNRAEEAKNGVKVGYSIPKEGAPMWFDMVAMPA 273
>gi|386728782|ref|YP_006195165.1| Spermidine/putrescine-binding protein [Staphylococcus aureus subsp.
aureus 71193]
gi|418978655|ref|ZP_13526455.1| Spermidine/putrescine-binding protein [Staphylococcus aureus subsp.
aureus DR10]
gi|379993479|gb|EIA14925.1| Spermidine/putrescine-binding protein [Staphylococcus aureus subsp.
aureus DR10]
gi|384230075|gb|AFH69322.1| Spermidine/putrescine-binding protein [Staphylococcus aureus subsp.
aureus 71193]
Length = 357
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 68/149 (45%), Gaps = 17/149 (11%)
Query: 230 RGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVI-VAG 288
+G ++ PY +GT+ I Y K K+ N + + WK + P+ +I +V+ RE+I ++
Sbjct: 128 KGNKYSLPYFFGTVGILYNKEKYPNESF---DSWKSLYNPKFKNQILLVDGAREIIGMSL 184
Query: 289 GKIA-------------VQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAV 335
K+ +++L LA QVR + +AV WS P V
Sbjct: 185 NKLGYNLNDRNSYHLKEAERDLTKLAPQVRGVVGDEITMMLQQNEGNIAVVWSGVAAPLV 244
Query: 336 KRMSNVAVVVPKSGASLWADLWAIPAASR 364
+ V+PK G++LW D IP ++
Sbjct: 245 QEGDKYNYVIPKEGSNLWFDNMVIPKTAQ 273
>gi|296387886|ref|ZP_06877361.1| polyamine ABC transporter [Pseudomonas aeruginosa PAb1]
Length = 353
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 95/218 (43%), Gaps = 41/218 (18%)
Query: 219 LRSNDAGEIDP---RGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWK---DPWWPE-L 271
L + AG +D +G ++ PY + T +GY K++ + P DW DP E +
Sbjct: 100 LSNEAAGYLDKDFDKGNRYSLPYAFTTTLVGYNKTELDKLGIDP-ADWSVIFDPAVLEKI 158
Query: 272 AGRISMVNSPREVIVAGGKIAVQ-------------QNLALLANQV-RLFDSTHYLKAFG 317
GR+++++ P+E+ A K Q L L A F+S+ Y+K
Sbjct: 159 KGRVTVMDDPQELFGAALKYLGHSANDTDPQHWKEAQTLILAAKPYWAAFNSSSYIKELT 218
Query: 318 IGDVWVAVGWSSDVL------PAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIG 371
+G++WVA G+SSD+ A R V +P+ GA L D I S
Sbjct: 219 LGNIWVAHGYSSDMYQARADAEAAGRAFKVDFALPRQGAVLAIDNMVIHKGS-------- 270
Query: 372 GQVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSA 409
+ P L +++I+F L A ++ G +P+A
Sbjct: 271 ---KNPD-LAYRFIDFMLDGRNASELTNQIGTG-TPNA 303
>gi|107103124|ref|ZP_01367042.1| hypothetical protein PaerPA_01004193 [Pseudomonas aeruginosa PACS2]
Length = 354
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 99/228 (43%), Gaps = 42/228 (18%)
Query: 219 LRSNDAGEIDP---RGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWK---DPWWPE-L 271
L + AG +D +G ++ PY + T +GY K++ + P DW DP E +
Sbjct: 101 LNNEAAGYLDKDFDKGNRYSLPYAFTTTLVGYNKTELDKLGIDP-ADWSVIFDPAVLEKI 159
Query: 272 AGRISMVNSPREVIVAGGKIAVQ-------------QNLALLANQV-RLFDSTHYLKAFG 317
GR+++++ P+E+ A K Q L L A F+S+ Y+K
Sbjct: 160 KGRVTVMDDPQELFGAALKYLGHSANDTDPQHWKEAQALILAAKPYWAAFNSSSYIKELT 219
Query: 318 IGDVWVAVGWSSDVL------PAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIG 371
+G++WVA G+SSD+ A R V +P+ GA L D I S
Sbjct: 220 LGNIWVAHGYSSDMYQARADAEAAGRAFKVDFALPRQGAVLAIDNMVIHKGS-------- 271
Query: 372 GQVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALESTLVKLPE 419
+ P L +++I+F L A ++ G +P+A +K PE
Sbjct: 272 ---KNPD-LAYRFIDFMLDGRNASELTNQIGTG-TPNAAALPFIK-PE 313
>gi|425897434|ref|ZP_18874025.1| putrescine-binding periplasmic protein, PotF family [Pseudomonas
chlororaphis subsp. aureofaciens 30-84]
gi|397892198|gb|EJL08676.1| putrescine-binding periplasmic protein, PotF family [Pseudomonas
chlororaphis subsp. aureofaciens 30-84]
Length = 366
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 115/262 (43%), Gaps = 42/262 (16%)
Query: 138 LRVVSLQNSVPQSWVKDFMRSQGKRLK---FQMNLCASIDGIVNN----LSTPFNK-LSF 189
LRV + + + S KDF ++ G ++ F N + N L P N+ L
Sbjct: 29 LRVYNWADYILPSVPKDFAKNSGIKVTWDTFDTNESLEAKLLTGNSGYDLVVPSNQFLDT 88
Query: 190 AIKKRFIEPIAEAEDQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIGYKK 249
IK + + +++ +W + K+ L SND G + PY +GT+ IG+
Sbjct: 89 QIKAGVFQKLDKSKLPNWKHQDPELLKL-LDSNDPGNQ------YGVPYMYGTVLIGFNP 141
Query: 250 SKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNSPREVI-VAGGKIAVQQN----- 296
+K + + AP++ W + PE + ++M++SP E++ +A + + N
Sbjct: 142 AKVKAALGDNAPVDSWDLVFKPENMEKLKSCGVAMLDSPSEILPLALHYLGLDPNSQNPQ 201
Query: 297 --------LALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLP---AVKRMSNVAVV- 344
+ + V F+S Y+ GD+ VA+G+S K N VV
Sbjct: 202 DYEKAKELMLKIRPYVTYFNSAKYMTDIANGDICVAIGYSGSFYQFGNRAKEAGNGVVVD 261
Query: 345 --VPKSGASLWADLWAIPAASR 364
+PK GA +W D +AIP +++
Sbjct: 262 WRLPKEGAPIWFDTFAIPKSAK 283
>gi|219870359|ref|YP_002474734.1| spermidine/putrescine-binding periplasmic protein 1 [Haemophilus
parasuis SH0165]
gi|219690563|gb|ACL31786.1| spermidine/putrescine-binding periplasmic protein 1 precursor
[Haemophilus parasuis SH0165]
Length = 346
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 84/206 (40%), Gaps = 32/206 (15%)
Query: 230 RGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVI-VAG 288
+G ++ P G I + + ++ N W D W PE G++ +++ REV +A
Sbjct: 119 KGNKYSLPQLLGAPGIAFNTNSYKGDNFTA---WGDLWKPEFKGKVQLLDDAREVFNIAL 175
Query: 289 GKI-------------AVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAV 335
K+ A + L L V F S + +F G+V V W+ V A
Sbjct: 176 LKLGQDPNTKDPAVIKAAYEELLKLRPNVLAFSSDNPANSFISGEVEVGQLWNGSVRIAK 235
Query: 336 KRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGQVRGPSPLIHQWIEFCLQTARAL 395
K + V +V PK G LW D AIP+ V+ P H+ I + L A
Sbjct: 236 KEQAPVNMVFPKEGPVLWVDTLAIPS-----------NVKNPDA-AHKLINYLLSAPVAE 283
Query: 396 PFKQEVIPGASPSALESTLVKLPEEL 421
E+ P++ L KLP+E+
Sbjct: 284 KLTLEI---GYPTSNVKALEKLPKEI 306
>gi|398924115|ref|ZP_10661042.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM48]
gi|398173857|gb|EJM61673.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM48]
Length = 366
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 115/262 (43%), Gaps = 42/262 (16%)
Query: 138 LRVVSLQNSVPQSWVKDFMRSQGKRLK---FQMNLCASIDGIVNN----LSTPFNK-LSF 189
LRV + + + S KDF R G ++ F N + N L P N+ +
Sbjct: 29 LRVYNWADYILPSVPKDFARDTGIKVTWDTFDTNESLEAKLLTGNSGYDLVVPSNQFIET 88
Query: 190 AIKKRFIEPIAEAEDQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIGYKK 249
IK + + +++ +W SH+ L+ D DP G + PY +GT+ IG+
Sbjct: 89 QIKAGVFQKLDKSKLPNW----SHQDPALLKLLDKN--DP-GNQYGMPYMYGTVLIGFNP 141
Query: 250 SKFQN--HNLAPIEDWKDPWWPE-----LAGRISMVNSPREVI-VAGGKIAVQQN----- 296
+K + AP++ W + PE A ++M++SP E++ +A + + N
Sbjct: 142 AKVKAALGENAPVDSWDLVFKPENMEKLKACGVAMLDSPSEILPLALHYLGLDPNSQNPD 201
Query: 297 -----LALLAN---QVRLFDSTHYLKAFGIGDVWVAVGWSSDVLP---AVKRMSNVAVV- 344
AL+ V F+S Y+ GD+ VA+G+S K N VV
Sbjct: 202 DYEKAKALMLKVRPYVTYFNSAKYMTDIANGDICVAIGYSGSFYQFGNRAKEAGNGVVVD 261
Query: 345 --VPKSGASLWADLWAIPAASR 364
+PK GA +W D +AIP +++
Sbjct: 262 WRLPKEGAPIWFDTFAIPKSAK 283
>gi|333899852|ref|YP_004473725.1| extracellular solute-binding protein [Pseudomonas fulva 12-X]
gi|333115117|gb|AEF21631.1| extracellular solute-binding protein family 1 [Pseudomonas fulva
12-X]
Length = 366
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 108/262 (41%), Gaps = 42/262 (16%)
Query: 138 LRVVSLQNSVPQSWVKDFMRSQGKRLK---FQMNLCASIDGIVNN----LSTPFNK-LSF 189
LRV + + + +KDF ++ G +L F+ N + N L P N L
Sbjct: 29 LRVYNWADYMLPQTLKDFQQNTGIKLTWDTFETNEALEAKLLTGNSGYDLVVPSNMFLDT 88
Query: 190 AIKKRFIEPIAEAEDQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIGYKK 249
IK + + +++ +W K L L +ND G + PY +GT+ IGY
Sbjct: 89 QIKAGVFQKLDKSKLPNW-KHLDPALLKLLETNDPG------NQYGVPYMYGTVLIGYNP 141
Query: 250 SKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNSPREVI-VAGGKIAVQQN----- 296
K ++ AP+ W + PE + ++M+++P E++ +A + + N
Sbjct: 142 DKVKSVLGENAPVNSWDLVFKPENMEKLKQCGVTMLDAPNEILPIALHYLGLPPNSTNPQ 201
Query: 297 --------LALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVV--- 345
L + V F S Y+ GD+ VA+G+S R V
Sbjct: 202 DYEKATELLMKVRPYVTYFHSAKYMTDIANGDICVAIGYSGSFYQFANRAKEAGNGVKVE 261
Query: 346 ---PKSGASLWADLWAIPAASR 364
PK GA +W D +AIP +++
Sbjct: 262 WRLPKEGAPIWFDTFAIPKSAQ 283
>gi|329298263|ref|ZP_08255599.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Plautia stali symbiont]
Length = 369
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 72/165 (43%), Gaps = 29/165 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP G +A PY WGT IGY K + AP+ W PE + +S +++
Sbjct: 123 DP-GNKYAIPYLWGTTGIGYNIDKVKAALGADAPVNSWDLVLKPENLEKLKSCGVSFLDA 181
Query: 281 PREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVAV 325
P E+ A +L L L +R F S+ Y+ G++ VA+
Sbjct: 182 PEEIFATVLNYLGKDPNSSDAKDYTGAATDLLLKLRPNIRYFHSSQYINDLANGNICVAI 241
Query: 326 GWSSDVLP----AVKRMSNV--AVVVPKSGASLWADLWAIPAASR 364
GWS D+L AVK + V VPK GA + D+ AIP ++
Sbjct: 242 GWSGDILQSKDRAVKANNGVHLGYSVPKEGALAFFDMMAIPKDAK 286
>gi|428318683|ref|YP_007116565.1| extracellular solute-binding protein family 1 [Oscillatoria
nigro-viridis PCC 7112]
gi|428242363|gb|AFZ08149.1| extracellular solute-binding protein family 1 [Oscillatoria
nigro-viridis PCC 7112]
Length = 376
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 75/180 (41%), Gaps = 35/180 (19%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWW--PELAGRISMVNSPREVI 285
DP G ++ P WGT + Y + + EDW W ELA R+++ N REV+
Sbjct: 148 DP-GNRYSVPVSWGTTGLIYNSEQLKEEP----EDWDYLWQHKQELAKRMTLANDVREVM 202
Query: 286 VAGGKI--------------AVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDV 331
A ++ + L L + F + + GD+ VA+ +SSD
Sbjct: 203 GAALRMLGYSLNSTNQEQVKQAYEKLVELKPAIASFTTDAWRPQMLTGDLKVAMCYSSDA 262
Query: 332 LPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGQVRGPSP-LIHQWIEFCLQ 390
+ + VVPKSG+SLW D IP + P+P ++WI F LQ
Sbjct: 263 NEVIPDNDKLRYVVPKSGSSLWTDTLVIPKGA-------------PNPEAAYKWINFMLQ 309
>gi|381182867|ref|ZP_09891648.1| extracellular solute-binding protein family 1 [Listeriaceae
bacterium TTU M1-001]
gi|380317249|gb|EIA20587.1| extracellular solute-binding protein family 1 [Listeriaceae
bacterium TTU M1-001]
Length = 357
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 92/207 (44%), Gaps = 34/207 (16%)
Query: 234 WAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVIVAG----G 289
++ PY WGT+ I Y K F + N + W W +L +I +++ REV+ G G
Sbjct: 132 YSMPYFWGTLGIIYNKKMFPDKNF---DHWDSLWDKDLENQILLIDGAREVMGLGLNSLG 188
Query: 290 KIAVQQNLALLANQV-RLFDSTHYLKAFGIGD----------VWVAVGWSSDVLPAVKRM 338
N L + +L T +KA +GD VAV +S + +
Sbjct: 189 YSLNDTNEKHLEEALLKLKKMTPNVKAI-VGDEIKLLMADNEAGVAVTFSGEASEMLSEN 247
Query: 339 SNVAVVVPKSGASLWADLWAIPAASRLETKQIGGQVRGPSPLIHQWIEFCLQTARALPFK 398
+++ V+PK G++LW D IP ++ V G HQ+I F L+ A
Sbjct: 248 ADLDYVIPKEGSNLWFDNMVIPKTAK--------NVDGA----HQFINFMLKPENA-AIN 294
Query: 399 QEVIPGASPSALESTLVKLPEELLKGK 425
E + A+P+ ++ + LP+E+ + K
Sbjct: 295 AEYVGYATPN--KAAIKLLPKEISQDK 319
>gi|319775579|ref|YP_004138067.1| spermidine/putrescine-binding periplasmic protein 2 [Haemophilus
influenzae F3047]
gi|329122378|ref|ZP_08250965.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Haemophilus aegyptius ATCC
11116]
gi|317450170|emb|CBY86384.1| spermidine/putrescine-binding periplasmic protein 2 precursor
[Haemophilus influenzae F3047]
gi|327473660|gb|EGF19079.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Haemophilus aegyptius ATCC
11116]
Length = 350
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 113/287 (39%), Gaps = 59/287 (20%)
Query: 138 LRVVSLQNSVPQSWVKDFMRSQG---------------KRLKFQMNLCASIDGIVNNLST 182
L V + + VP V F + G +LK N + D +V S
Sbjct: 30 LYVYNWTDYVPSDLVAQFSKETGIEVIYSTFESNEEMYAKLKLTQNTGSGYD-LVFPSSY 88
Query: 183 PFNKLSFAIKKRFIEPIAEAEDQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGT 242
NK+ IK++ ++PI DQ + K L E DP K ++ PY +G
Sbjct: 89 YVNKM---IKEKMLQPI----DQSKLTNIHQIPKHLLNK----EFDPENK-YSLPYVYGL 136
Query: 243 MAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREV----IVAGGK-------- 290
I + + I W D W PE G++ M + REV ++ GK
Sbjct: 137 TGIEVNADEI---DPKTITSWADLWKPEFKGKVLMTSDAREVFHVALLLDGKSPNTTNEE 193
Query: 291 ---IAVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPK 347
A ++ LL N V F+S + G+V + + W+ A K ++ V PK
Sbjct: 194 DIKTAYERLEKLLPN-VATFNSDSPEVPYVQGEVAIGMIWNGSAYLAQKENQSLQFVYPK 252
Query: 348 SGASLWADLWAIPAASRLETKQIGGQVRGPSPLIHQWIEFCLQTARA 394
GA W D +AIP +++ V G H++I+F L+ A
Sbjct: 253 EGAIFWMDNYAIPNSAQ--------NVEGA----HKFIDFLLRPENA 287
>gi|421158598|ref|ZP_15617845.1| polyamine transport protein PotD [Pseudomonas aeruginosa ATCC
25324]
gi|404549479|gb|EKA58338.1| polyamine transport protein PotD [Pseudomonas aeruginosa ATCC
25324]
Length = 354
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 99/228 (43%), Gaps = 42/228 (18%)
Query: 219 LRSNDAGEIDP---RGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWK---DPWWPE-L 271
L + AG +D +G ++ PY + T +GY K++ + P DW DP E +
Sbjct: 101 LSNEAAGYLDKDFDKGNRYSLPYAFTTTLVGYNKTELDKLGIDP-ADWSVIFDPAVLEKI 159
Query: 272 AGRISMVNSPREVIVAGGKIAVQ-------------QNLALLANQV-RLFDSTHYLKAFG 317
GR+++++ P+E+ A K Q L L A F+S+ Y+K
Sbjct: 160 KGRVTVMDDPQELFGAALKYLGHSANDTDPQHWKEAQALILAAKPYWAAFNSSSYIKELT 219
Query: 318 IGDVWVAVGWSSDVL------PAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIG 371
+G++WVA G+SSD+ A R V +P+ GA L D I S
Sbjct: 220 LGNIWVAHGYSSDMYQARADAEAAGRAFKVDFALPRQGAVLAIDNMVIHKGS-------- 271
Query: 372 GQVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALESTLVKLPE 419
+ P L +++I+F L A ++ G +P+A +K PE
Sbjct: 272 ---KNPD-LAYRFIDFMLDGRNASELTNQIGTG-TPNAAALPFIK-PE 313
>gi|424923630|ref|ZP_18346991.1| Spermidine/putrescine-binding periplasmic protein [Pseudomonas
fluorescens R124]
gi|404304790|gb|EJZ58752.1| Spermidine/putrescine-binding periplasmic protein [Pseudomonas
fluorescens R124]
Length = 366
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 115/262 (43%), Gaps = 42/262 (16%)
Query: 138 LRVVSLQNSVPQSWVKDFMRSQGKRLK---FQMNLCASIDGIVNN----LSTPFNK-LSF 189
LRV + + + S KDF G ++ F N + N L P N+ +
Sbjct: 29 LRVYNWADYILPSVPKDFAAKTGIKVTWDTFDTNESLEAKLLTGNSGYDLVVPSNQFIDT 88
Query: 190 AIKKRFIEPIAEAEDQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIGYKK 249
IK + + +++ +W SH+ L+ DA DP G + PY +GT+ IG+
Sbjct: 89 QIKAGVFQKLDKSKLPNW----SHQDPALLKLLDAN--DP-GNQYGVPYMYGTVLIGFNP 141
Query: 250 SKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNSPREVI-VAGGKIAVQQN----- 296
+K + + AP++ W + PE + ++M++SP E++ +A + + N
Sbjct: 142 AKVKAALGDNAPVDSWDLVFKPENMEKLKSCGVAMLDSPSEILPLALHYLGLDPNSQNPA 201
Query: 297 --------LALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLP---AVKRMSNVAVV- 344
+ + V F+S Y+ GD+ VA+G+S K N VV
Sbjct: 202 DYEKAKDLMLKIRPYVTYFNSAKYMTDIANGDICVAIGYSGSFYQFGNRAKEAGNGVVVD 261
Query: 345 --VPKSGASLWADLWAIPAASR 364
+PK GA +W D +AIP +++
Sbjct: 262 WRLPKEGAPIWFDTFAIPKSAK 283
>gi|420138192|ref|ZP_14646132.1| polyamine transport protein PotD [Pseudomonas aeruginosa CIG1]
gi|403249045|gb|EJY62561.1| polyamine transport protein PotD [Pseudomonas aeruginosa CIG1]
Length = 354
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 99/228 (43%), Gaps = 42/228 (18%)
Query: 219 LRSNDAGEIDP---RGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWK---DPWWPE-L 271
L + AG +D +G ++ PY + T +GY K++ + P DW DP E +
Sbjct: 101 LSNEAAGYLDKDFDKGNRYSLPYAFTTTLVGYNKTELDKLGIDP-ADWSVIFDPAVLEKI 159
Query: 272 AGRISMVNSPREVIVAGGKIAVQ-------------QNLALLANQV-RLFDSTHYLKAFG 317
GR+++++ P+E+ A K Q L L A F+S+ Y+K
Sbjct: 160 KGRVTVMDDPQELFGAALKYLGHSANDTDPQHWKEAQALILAAKPYWAAFNSSSYIKELT 219
Query: 318 IGDVWVAVGWSSDVL------PAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIG 371
+G++WVA G+SSD+ A R V +P+ GA L D I S
Sbjct: 220 LGNIWVAHGYSSDMYQARADAEAAGRAFKVDFALPRQGAVLAIDNMVIHKGS-------- 271
Query: 372 GQVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALESTLVKLPE 419
+ P L +++I+F L A ++ G +P+A +K PE
Sbjct: 272 ---KNPD-LAYRFIDFMLDGRNASELTNQIGTG-TPNAAALPFIK-PE 313
>gi|170723466|ref|YP_001751154.1| extracellular solute-binding protein [Pseudomonas putida W619]
gi|169761469|gb|ACA74785.1| extracellular solute-binding protein family 1 [Pseudomonas putida
W619]
Length = 359
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 70/163 (42%), Gaps = 27/163 (16%)
Query: 226 EIDPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGRIS------M 277
E++ G + PY WG+ IGY K + + AP++ W + PE ++ +
Sbjct: 111 EVNDPGNQYGFPYLWGSTGIGYNIDKVKAVLGDNAPVDSWDLIFKPEYMSKLKSCGIAVL 170
Query: 278 VNSPREVIVAGGKIAV---------QQNLALLANQVR----LFDSTHYLKAFGIGDVWVA 324
N P + +A + + + L QVR F S+ Y GD+ V
Sbjct: 171 DNGPELLPIALHYLGLPHHSKDPKDYEKAKELLMQVRPYISYFHSSKYTGDLANGDICVV 230
Query: 325 VGWSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIPA 361
VG+S DVL A R V +PK GA +W D+ A+PA
Sbjct: 231 VGFSGDVLQAKNRADEAKNGVKVGYSIPKEGAPMWFDMVAMPA 273
>gi|424939578|ref|ZP_18355341.1| polyamine transport protein PotD [Pseudomonas aeruginosa NCMG1179]
gi|346056024|dbj|GAA15907.1| polyamine transport protein PotD [Pseudomonas aeruginosa NCMG1179]
Length = 353
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 99/228 (43%), Gaps = 42/228 (18%)
Query: 219 LRSNDAGEIDP---RGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWK---DPWWPE-L 271
L + AG +D +G ++ PY + T +GY K++ + P DW DP E +
Sbjct: 100 LSNEAAGYLDKDFDKGNRYSLPYAFTTTLVGYNKTELDKLGIDPA-DWSVIFDPAVLEKI 158
Query: 272 AGRISMVNSPREVIVAGGKIAVQ-------------QNLALLANQV-RLFDSTHYLKAFG 317
GR+++++ P+E+ A K Q L L A F+S+ Y+K
Sbjct: 159 KGRVTVMDDPQELFGAALKYLGHSANDTDPQHWKEAQALILAAKPYWAAFNSSSYIKELT 218
Query: 318 IGDVWVAVGWSSDVL------PAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIG 371
+G++WVA G+SSD+ A R V +P+ GA L D I S
Sbjct: 219 LGNIWVAHGYSSDMYQARADAEAAGRAFKVDFALPRQGAVLAIDNMVIHKGS-------- 270
Query: 372 GQVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALESTLVKLPE 419
+ P L +++I+F L A ++ G +P+A +K PE
Sbjct: 271 ---KNPD-LAYRFIDFMLDGRNASELTNQIGTG-TPNAAALPFIK-PE 312
>gi|163790907|ref|ZP_02185331.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Carnobacterium
sp. AT7]
gi|159873860|gb|EDP67940.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Carnobacterium
sp. AT7]
Length = 357
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 79/179 (44%), Gaps = 22/179 (12%)
Query: 204 DQDWFKRLSHKWKVYLRSNDAG----EIDPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAP 259
D+D L H L + DA DP + ++ PY WGT+ I Y KF +
Sbjct: 99 DEDLLIELDHSKIKGLANIDAQFLNQSFDPSNQ-FSIPYFWGTLGIIYN-DKFVEED--A 154
Query: 260 IEDWKDPWWPELAGRISMVNSPREVI-----VAGGKIAVQQNLALLANQVRLFDSTHYLK 314
I+ W D W PEL + +++ RE+I G + +++ L A +L T +K
Sbjct: 155 IQHWDDLWNPELKNEVMLIDGAREIIGLALDSEGNSLNSKEDDQLAAAAKKLSGLTPNVK 214
Query: 315 AFGIGDV---------WVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 364
A ++ VAV +S + + N+ V+P G++LW D + IP ++
Sbjct: 215 AIVADEIKMYMIQEEASVAVTFSGEASEMLYENENLHYVIPSEGSNLWFDNFVIPKTAK 273
>gi|398960848|ref|ZP_10678347.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM30]
gi|398153501|gb|EJM42000.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM30]
Length = 366
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 115/262 (43%), Gaps = 42/262 (16%)
Query: 138 LRVVSLQNSVPQSWVKDFMRSQGKRLK---FQMNLCASIDGIVNN----LSTPFNK-LSF 189
LRV + + + S KDF G ++ F N + N L P N+ +
Sbjct: 29 LRVYNWADYILPSVPKDFAAKTGIKVTWDTFDTNESLEAKLLTGNSGYDLVVPSNQFIDT 88
Query: 190 AIKKRFIEPIAEAEDQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIGYKK 249
IK + + +++ +W SH+ L+ DA DP G + PY +GT+ IG+
Sbjct: 89 QIKAGVFQKLDKSKLPNW----SHQDPALLKLLDAN--DP-GNQYGVPYMYGTVLIGFNP 141
Query: 250 SKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNSPREVI-VAGGKIAVQQN----- 296
+K + + AP++ W + PE + ++M++SP E++ +A + + N
Sbjct: 142 AKVKAALGDNAPVDSWDLVFKPENMEKLKSCGVAMLDSPSEILPLALHYLGLDPNSQNPA 201
Query: 297 --------LALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLP---AVKRMSNVAVV- 344
+ + V F+S Y+ GD+ VA+G+S K N VV
Sbjct: 202 DYEKAKDLMLKIRPYVTYFNSAKYMTDIANGDICVAIGYSGSFYQFGNRAKEAGNGVVVD 261
Query: 345 --VPKSGASLWADLWAIPAASR 364
+PK GA +W D +AIP +++
Sbjct: 262 WRLPKEGAPIWFDTFAIPKSAK 283
>gi|256545740|ref|ZP_05473096.1| spermidine/putrescine-binding periplasmic protein PotD
[Anaerococcus vaginalis ATCC 51170]
gi|256398436|gb|EEU12057.1| spermidine/putrescine-binding periplasmic protein PotD
[Anaerococcus vaginalis ATCC 51170]
Length = 359
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 81/187 (43%), Gaps = 38/187 (20%)
Query: 204 DQDWFKRLSHKWKVYLRSNDAG----EIDPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAP 259
D++ K+L HK L + D DP + ++ PY WG+ I Y K++ + +
Sbjct: 99 DKNLLKKLDHKKIKGLENIDERFLNLSFDPNNQ-YSIPYFWGSFGIIYNNKKYKKEDFSS 157
Query: 260 IEDWKDPWWPELAGRISMVNSPREVIVAG----GK-----------------IAVQQNL- 297
WK+ W + G I + RE + G GK + +N+
Sbjct: 158 ---WKNLWDKKFEGEILSFDGARETLCIGLLANGKSLNEKDEKILRETKDDLVGFMKNVK 214
Query: 298 ALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLW 357
A+LA+++R++ G+ V + +S + A + N++ +PK G+++W D
Sbjct: 215 AILADEIRMY--------MAQGEADVGITFSGEASMAKEINPNLSYAIPKEGSNIWFDTM 266
Query: 358 AIPAASR 364
IP S+
Sbjct: 267 VIPKTSK 273
>gi|298492376|ref|YP_003722553.1| family 1 extracellular solute-binding protein ['Nostoc azollae'
0708]
gi|298234294|gb|ADI65430.1| extracellular solute-binding protein family 1 ['Nostoc azollae'
0708]
Length = 363
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 69/152 (45%), Gaps = 21/152 (13%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPW--WPELAGRISMVNSPREVI 285
DP ++ P+ WGT + Y K P EDW+ W +L R++++N REV+
Sbjct: 136 DPNNH-YSIPFNWGTTGLLYNSEKLT----TPPEDWEYLWRNQDKLYKRMTLLNDVREVM 190
Query: 286 VAGGKI--------------AVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDV 331
A K+ + L L + FD+ + GD+ +A+ +S+D
Sbjct: 191 GATLKMLGYSYNSQNEMEIKQAYEKLLSLKPALAAFDTDAWQNQILAGDLLLAMCYSADG 250
Query: 332 LPAVKRMSNVAVVVPKSGASLWADLWAIPAAS 363
+ K + + V+P+SG+SLW D IP +
Sbjct: 251 IKISKENAKLKYVIPRSGSSLWTDTIVIPKTA 282
>gi|15598806|ref|NP_252300.1| polyamine transporter PotD [Pseudomonas aeruginosa PAO1]
gi|254236526|ref|ZP_04929849.1| polyamine transport protein PotD [Pseudomonas aeruginosa C3719]
gi|254242308|ref|ZP_04935630.1| polyamine transport protein PotD [Pseudomonas aeruginosa 2192]
gi|418586155|ref|ZP_13150201.1| polyamine transporter PotD [Pseudomonas aeruginosa MPAO1/P1]
gi|418589417|ref|ZP_13153339.1| polyamine transporter PotD [Pseudomonas aeruginosa MPAO1/P2]
gi|421152581|ref|ZP_15612161.1| polyamine transport protein PotD [Pseudomonas aeruginosa ATCC
14886]
gi|421179226|ref|ZP_15636822.1| polyamine transport protein PotD [Pseudomonas aeruginosa E2]
gi|9949767|gb|AAG06998.1|AE004781_6 polyamine transport protein PotD [Pseudomonas aeruginosa PAO1]
gi|126168457|gb|EAZ53968.1| polyamine transport protein PotD [Pseudomonas aeruginosa C3719]
gi|126195686|gb|EAZ59749.1| polyamine transport protein PotD [Pseudomonas aeruginosa 2192]
gi|375043829|gb|EHS36445.1| polyamine transporter PotD [Pseudomonas aeruginosa MPAO1/P1]
gi|375051651|gb|EHS44117.1| polyamine transporter PotD [Pseudomonas aeruginosa MPAO1/P2]
gi|404525341|gb|EKA35617.1| polyamine transport protein PotD [Pseudomonas aeruginosa ATCC
14886]
gi|404547469|gb|EKA56467.1| polyamine transport protein PotD [Pseudomonas aeruginosa E2]
Length = 354
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 99/228 (43%), Gaps = 42/228 (18%)
Query: 219 LRSNDAGEIDP---RGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWK---DPWWPE-L 271
L + AG +D +G ++ PY + T +GY K++ + P DW DP E +
Sbjct: 101 LSNEAAGYLDKDFDKGNRYSLPYAFTTTLVGYNKTELDKLGIDP-ADWSVIFDPAVLEKI 159
Query: 272 AGRISMVNSPREVIVAGGKIAVQ-------------QNLALLANQV-RLFDSTHYLKAFG 317
GR+++++ P+E+ A K Q L L A F+S+ Y+K
Sbjct: 160 KGRVTVMDDPQELFGAALKYLGHSANDTDPQHWKEAQALILAAKPYWAAFNSSSYIKELT 219
Query: 318 IGDVWVAVGWSSDVL------PAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIG 371
+G++WVA G+SSD+ A R V +P+ GA L D I S
Sbjct: 220 LGNIWVAHGYSSDMYQARADAEAAGRAFKVDFALPRQGAVLAIDNMVIHKGS-------- 271
Query: 372 GQVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALESTLVKLPE 419
+ P L +++I+F L A ++ G +P+A +K PE
Sbjct: 272 ---KNPD-LAYRFIDFMLDGRNASELTNQIGTG-TPNAAALPFIK-PE 313
>gi|398897171|ref|ZP_10647991.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM55]
gi|398177238|gb|EJM64926.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM55]
Length = 367
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 86/192 (44%), Gaps = 34/192 (17%)
Query: 191 IKKRFIEPIAEAEDQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIGYKKS 250
IK + P+ A+ D FK + L +ND G +A PY WGT IGY
Sbjct: 91 IKAGALAPLPRAQMPD-FKNMDTDLLAKLANNDPG------NQYAVPYLWGTNGIGYNID 143
Query: 251 KFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNSPREVI-VAGGKIAVQQN------ 296
K + + AP++ W + E R ++M++SP E++ VA + + N
Sbjct: 144 KVRALLGDKAPVDSWDLVFKEENLARLGECGVAMLDSPSEMLPVALHYLGLPPNSTNPED 203
Query: 297 -------LALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPA---VKRMSN---VAV 343
L L + F+S+ ++ G++ VAVGWS +L A ++ N +A
Sbjct: 204 YKKAEALLLKLRPHIAYFNSSKFISDLSNGNICVAVGWSGAMLEAKTTAEQAGNGVKIAY 263
Query: 344 VVPKSGASLWAD 355
+PK GA +W D
Sbjct: 264 SLPKEGAPVWFD 275
>gi|387780215|ref|YP_005755013.1| ABC transporter extracellular binding protein [Staphylococcus
aureus subsp. aureus LGA251]
gi|344177317|emb|CCC87783.1| ABC transporter extracellular binding protein [Staphylococcus
aureus subsp. aureus LGA251]
Length = 357
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 66/149 (44%), Gaps = 17/149 (11%)
Query: 230 RGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVI-VAG 288
+G ++ PY +GT+ I Y K K+ N + + WK + P+ +I +V+ RE+I ++
Sbjct: 128 KGNKYSLPYFFGTVGILYNKEKYPNESF---DSWKSLYNPKFKNQILLVDGAREIIGMSL 184
Query: 289 GKIAVQQN-------------LALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAV 335
K+ N L LA QVR + +AV WS P V
Sbjct: 185 NKLGYNLNDRNSHHLKEAVRDLTKLAPQVRGVVGDEITMMLQQNEGNIAVVWSGVAAPLV 244
Query: 336 KRMSNVAVVVPKSGASLWADLWAIPAASR 364
+ V+PK G++LW D IP ++
Sbjct: 245 QEGDKYNYVIPKEGSNLWFDNMVIPKTAQ 273
>gi|403237367|ref|ZP_10915953.1| spermidine:putrescine ABC transporter [Bacillus sp. 10403023]
Length = 358
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 86/211 (40%), Gaps = 35/211 (16%)
Query: 227 IDPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVIV 286
DP G ++ PY WGT+ I Y + W D W P L I V+ RE++
Sbjct: 126 FDP-GNQYSVPYFWGTVGIVYNPTMLDGKEFTS---WNDLWDPSLKNEIIFVDGAREIMG 181
Query: 287 AG----GKIAVQQNL-ALLANQVRLFDSTHYLKAFGIGD----------VWVAVGWSSDV 331
G G NL L+ + +L T +KA +GD + + WS D
Sbjct: 182 MGLNSLGYSLNDTNLDHLMEAKDKLIKLTPNVKAI-VGDEGKVLIQNREAAIGIVWSGDA 240
Query: 332 LPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGQVRGPSPLIHQWIEFCLQT 391
+ ++ VVP G++LW D IP + K I G HQ+I F L
Sbjct: 241 ADIMWENEDLNYVVPSEGSNLWFDNMVIPKTA----KNIDGA--------HQFINFMLDA 288
Query: 392 ARALPFKQEVIPGASPSALESTLVKLPEELL 422
A E + ++P+ + L +PE+++
Sbjct: 289 EIAAQ-NTEYVSYSTPN--KEALQYMPEDMV 316
>gi|449468189|ref|XP_004151804.1| PREDICTED: putrescine-binding periplasmic protein-like, partial
[Cucumis sativus]
Length = 292
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 73/166 (43%), Gaps = 31/166 (18%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAP---IEDWKDPWWPELAGR-----ISMVN 279
DP K +A PY W T IG+ K + L P ++ W PE + +S ++
Sbjct: 52 DPDNK-YAMPYLWATTGIGFNVDKVKAA-LGPDVKLDSWDVVLKPENLEKLKSCGVSFLD 109
Query: 280 SPREVIV--------------AGGKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVWVA 324
+P E+ A +L L L +R F S+ Y+ GD+ VA
Sbjct: 110 APEEIFATVLNYLGKDPNSSKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVA 169
Query: 325 VGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 364
+GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 170 IGWAGDVWQAANRAKEAKNGVNVSYFIPKEGALAFFDVFAMPADAK 215
>gi|339624373|ref|ZP_08660162.1| spermidine/putrescine-binding periplasmic protein [Fructobacillus
fructosus KCTC 3544]
Length = 359
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 78/154 (50%), Gaps = 19/154 (12%)
Query: 230 RGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVI---- 285
RG ++ PY WGT+ I Y K + N + + +W W + ++ +V+S R+++
Sbjct: 130 RGNQYSIPYFWGTLGILYNKKEV---NGSELTNWSALWSAKYRNQVLLVDSARDILGMTL 186
Query: 286 VAGGKIAVQQNLA-LLANQVRLFDSTHYLKA---------FGIGDVWVAVGWSSDVLPAV 335
++ GK QN+A L A Q +L +KA G+ +AV +S + A+
Sbjct: 187 ISQGKSVNDQNVADLAAAQGKLSSLMPNVKAIVGDELKLYMAQGEGSLAVTYSGEAKNAM 246
Query: 336 KRMSNVAVVVPKSGASLWADLWAIPAASRLETKQ 369
+R ++A VP+ G++LW D IP ++ E KQ
Sbjct: 247 ERNPDLAYTVPEDGSNLWLDNLVIPKSA--EHKQ 278
>gi|398992660|ref|ZP_10695624.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM21]
gi|398136669|gb|EJM25750.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM21]
Length = 370
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 73/160 (45%), Gaps = 28/160 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP G A PY WG++ IGY K + AP + W + PE A + IS+++S
Sbjct: 125 DP-GNEHAFPYMWGSIGIGYNAEKVKAALGADAPTDSWDLIFKPENAAKLKSCGISLLDS 183
Query: 281 PREVIVAG-----------GKIAVQQNLALLAN---QVRLFDSTHYLKAFGIGDVWVAVG 326
P E+I K + + AL+ + F S+ Y+ G++ VAVG
Sbjct: 184 PTEMIPVALHYLGLPTDSQKKEDIDKAEALIMKVRPSIAYFHSSKYISDLANGNICVAVG 243
Query: 327 WSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIP 360
+S D+ A R + V+ +PK GA + D+ AIP
Sbjct: 244 YSGDIYQAKSRAAEAGDKVKVSYNIPKEGAGSFYDMVAIP 283
>gi|416854709|ref|ZP_11911066.1| polyamine transport protein PotD [Pseudomonas aeruginosa 138244]
gi|421518153|ref|ZP_15964827.1| polyamine transporter PotD [Pseudomonas aeruginosa PAO579]
gi|451987812|ref|ZP_21935964.1| ABC transporter, periplasmic spermidine putrescine-binding protein
PotD (TC 3.A.1.11.1) [Pseudomonas aeruginosa 18A]
gi|334843692|gb|EGM22277.1| polyamine transport protein PotD [Pseudomonas aeruginosa 138244]
gi|404347635|gb|EJZ73984.1| polyamine transporter PotD [Pseudomonas aeruginosa PAO579]
gi|451754571|emb|CCQ88487.1| ABC transporter, periplasmic spermidine putrescine-binding protein
PotD (TC 3.A.1.11.1) [Pseudomonas aeruginosa 18A]
gi|453047383|gb|EME95097.1| polyamine transporter PotD [Pseudomonas aeruginosa PA21_ST175]
Length = 353
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 99/228 (43%), Gaps = 42/228 (18%)
Query: 219 LRSNDAGEIDP---RGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWK---DPWWPE-L 271
L + AG +D +G ++ PY + T +GY K++ + P DW DP E +
Sbjct: 100 LSNEAAGYLDKDFDKGNRYSLPYAFTTTLVGYNKTELDKLGIDP-ADWSVIFDPAVLEKI 158
Query: 272 AGRISMVNSPREVIVAGGKIAVQ-------------QNLALLANQV-RLFDSTHYLKAFG 317
GR+++++ P+E+ A K Q L L A F+S+ Y+K
Sbjct: 159 KGRVTVMDDPQELFGAALKYLGHSANDTDPQHWKEAQALILAAKPYWAAFNSSSYIKELT 218
Query: 318 IGDVWVAVGWSSDVL------PAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIG 371
+G++WVA G+SSD+ A R V +P+ GA L D I S
Sbjct: 219 LGNIWVAHGYSSDMYQARADAEAAGRAFKVDFALPRQGAVLAIDNMVIHKGS-------- 270
Query: 372 GQVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALESTLVKLPE 419
+ P L +++I+F L A ++ G +P+A +K PE
Sbjct: 271 ---KNPD-LAYRFIDFMLDGRNASELTNQIGTG-TPNAAALPFIK-PE 312
>gi|152997526|ref|YP_001342361.1| extracellular solute-binding protein [Marinomonas sp. MWYL1]
gi|150838450|gb|ABR72426.1| extracellular solute-binding protein family 1 [Marinomonas sp.
MWYL1]
Length = 361
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 69/146 (47%), Gaps = 26/146 (17%)
Query: 237 PYRWGTMAIGYKKSKFQNH-NLAPIEDWKDPWWPELAGR-----ISMVNSPREVI-VAGG 289
PY WGT+ IGY + + I+ W + PE+A + I++++SP EV+ +A
Sbjct: 125 PYAWGTIGIGYNTQMIEERLGTSDIDSWDILFNPEIAAKLKDCGIAVLDSPAEVMSIANN 184
Query: 290 KIAVQQNL---------ALLANQVR----LFDSTHYLKAFGIGDVWVAVGWSSDVLPAVK 336
V N A L +Q R F S+ Y+ G++ VA+G++ D+L +
Sbjct: 185 YRQVDPNTEDTKELEASAKLMSQARPFIKYFHSSTYISDLANGEICVAIGYNGDILQSQG 244
Query: 337 RMS------NVAVVVPKSGASLWADL 356
R ++ V+PK G +W DL
Sbjct: 245 RAEEANQGVDINFVIPKEGTLVWFDL 270
>gi|313108968|ref|ZP_07794943.1| polyamine transport protein PotD [Pseudomonas aeruginosa 39016]
gi|386067645|ref|YP_005982949.1| polyamine ABC transporter [Pseudomonas aeruginosa NCGM2.S1]
gi|310881445|gb|EFQ40039.1| polyamine transport protein PotD [Pseudomonas aeruginosa 39016]
gi|348036204|dbj|BAK91564.1| polyamine ABC transporter [Pseudomonas aeruginosa NCGM2.S1]
Length = 353
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 99/228 (43%), Gaps = 42/228 (18%)
Query: 219 LRSNDAGEIDP---RGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWK---DPWWPE-L 271
L + AG +D +G ++ PY + T +GY K++ + P DW DP E +
Sbjct: 100 LSNEAAGYLDKDFDKGNRYSLPYAFTTTLVGYNKTELDKLGIDP-ADWSVIFDPAVLEKI 158
Query: 272 AGRISMVNSPREVIVAGGKIAVQ-------------QNLALLANQV-RLFDSTHYLKAFG 317
GR+++++ P+E+ A K Q L L A F+S+ Y+K
Sbjct: 159 KGRVTVMDDPQELFGAALKYLGHSANDTDPQHWKEAQALILAAKPYWAAFNSSSYIKELT 218
Query: 318 IGDVWVAVGWSSDVL------PAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIG 371
+G++WVA G+SSD+ A R V +P+ GA L D I S
Sbjct: 219 LGNIWVAHGYSSDMYQARADAEAAGRAFKVDFALPRQGAVLAIDNMVIHKGS-------- 270
Query: 372 GQVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALESTLVKLPE 419
+ P L +++I+F L A ++ G +P+A +K PE
Sbjct: 271 ---KNPD-LAYRFIDFMLDGRNASELTNQIGTG-TPNAAALPFIK-PE 312
>gi|429213097|ref|ZP_19204262.1| polyamine transport protein [Pseudomonas sp. M1]
gi|428157579|gb|EKX04127.1| polyamine transport protein [Pseudomonas sp. M1]
Length = 366
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 82/192 (42%), Gaps = 39/192 (20%)
Query: 226 EIDPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMV 278
EI G +A PY WGT+ +GY K + + AP++ W + PE + +S +
Sbjct: 118 EISDPGNKFAIPYMWGTIGLGYNPDKVKAVLGDNAPVDSWDLVFKPENIQKLKQCGVSFL 177
Query: 279 NSPREVIVAGGKI-----------AVQQNLALLAN---QVRLFDSTHYLKAFGIGDVWVA 324
+SP E++ A ++ AL + F S+ Y+ G++ VA
Sbjct: 178 DSPTEMLPAALHYLGYKPDSNDPKEIKAATALYQKIRPYITYFHSSKYISDLANGNICVA 237
Query: 325 VGWSSDVLPAVKRMS----NVAVV--VPKSGASLWADLWAIPAASRLETKQIGGQVRGPS 378
VG+S DV A R + NV V+ +PK GA + D AIP P
Sbjct: 238 VGYSGDVYQAKARAAEAKNNVHVLYNIPKEGAGAFFDTVAIPK-----------DAENPE 286
Query: 379 PLIHQWIEFCLQ 390
+ QW+ F L+
Sbjct: 287 GAL-QWVNFLLE 297
>gi|257427817|ref|ZP_05604215.1| ABC transporter extracellular binding protein [Staphylococcus
aureus subsp. aureus 65-1322]
gi|257274658|gb|EEV06145.1| ABC transporter extracellular binding protein [Staphylococcus
aureus subsp. aureus 65-1322]
Length = 357
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 68/149 (45%), Gaps = 17/149 (11%)
Query: 230 RGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVI-VAG 288
+G ++ PY +GT+ I Y K K+ N + + WK + P+ +I +V+ RE+I ++
Sbjct: 128 KGNKYSLPYFFGTVGILYNKEKYPNESF---DSWKSLYNPKFKNQILLVDGAREIIGMSL 184
Query: 289 GKIA-------------VQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAV 335
K+ +++L LA QVR + +AV WS P V
Sbjct: 185 NKLGYNLNDRNSHHLKEAERDLTKLAPQVRGVVGDEITMMLEQNEGNIAVVWSGVAAPLV 244
Query: 336 KRMSNVAVVVPKSGASLWADLWAIPAASR 364
+ V+PK G++LW D IP ++
Sbjct: 245 QEGYKYNYVIPKEGSNLWFDNMVIPKTAQ 273
>gi|256829625|ref|YP_003158353.1| family 1 extracellular solute-binding protein [Desulfomicrobium
baculatum DSM 4028]
gi|256578801|gb|ACU89937.1| extracellular solute-binding protein family 1 [Desulfomicrobium
baculatum DSM 4028]
Length = 342
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 66/158 (41%), Gaps = 25/158 (15%)
Query: 225 GEIDPR--------GKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRIS 276
G +DP+ ++ PY WG+ AI + N A + + D W PEL G+I
Sbjct: 103 GNLDPKLMNQSFDPDNTYSVPYMWGSTAIAVNTT---NPVAAAVTSYADLWKPELKGKIL 159
Query: 277 MVNSPREVIVAG-------------GKIAVQQNLAL-LANQVRLFDSTHYLKAFGIGDVW 322
+ N R V+ G K+A L + L VR+FDS +A +V
Sbjct: 160 LPNDMRGVLGMGLKRLGYSLNETDPAKVAEACELLMPLMASVRVFDSDSPKQAILNNEVQ 219
Query: 323 VAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIP 360
AV W+ + A ++ V P G SLW D IP
Sbjct: 220 AAVLWNGEAYIASDENPDIRYVYPTEGFSLWVDNLCIP 257
>gi|384549863|ref|YP_005739115.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Staphylococcus aureus
subsp. aureus JKD6159]
gi|302332712|gb|ADL22905.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Staphylococcus aureus
subsp. aureus JKD6159]
Length = 357
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 68/149 (45%), Gaps = 17/149 (11%)
Query: 230 RGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVI-VAG 288
+G ++ PY +GT+ I Y K K+ N + + WK + P+ +I +V+ RE+I ++
Sbjct: 128 KGNKYSLPYFFGTVGILYNKEKYPNESF---DSWKSLYNPKFKNQILLVDGAREIIGMSL 184
Query: 289 GKIA-------------VQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAV 335
K+ +++L LA QVR + +AV WS P V
Sbjct: 185 NKLGYNLNDRNSHHLKEAERDLTKLAPQVRGVVGDEITMMLQQNEGNIAVVWSGVAAPLV 244
Query: 336 KRMSNVAVVVPKSGASLWADLWAIPAASR 364
+ V+PK G++LW D IP ++
Sbjct: 245 QDGDKYNYVIPKEGSNLWFDNMVIPKTAQ 273
>gi|398853859|ref|ZP_10610448.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM80]
gi|398238127|gb|EJN23863.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM80]
Length = 370
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 74/160 (46%), Gaps = 28/160 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP G A PY WG++ IG+ K + AP++ W + PE A + IS+++S
Sbjct: 125 DP-GNEHAFPYMWGSIGIGFNAEKVKAALGADAPVDSWDLIFKPENAAKLKSCGISLLDS 183
Query: 281 PREVIVAG-----------GKIAVQQNLALLAN---QVRLFDSTHYLKAFGIGDVWVAVG 326
P E+I K + + AL+ + F S+ Y+ G++ VAVG
Sbjct: 184 PTEMIPVALHYLGLPTDSQKKEDIDKAEALIMKVRPSIAYFHSSKYISDLANGNICVAVG 243
Query: 327 WSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIP 360
+S D+ A R + V+ +PK GA + D+ AIP
Sbjct: 244 YSGDIYQAKSRAAEAGDKVKVSYNIPKEGAGSFYDMVAIP 283
>gi|402702295|ref|ZP_10850274.1| extracellular solute-binding protein [Pseudomonas fragi A22]
Length = 366
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 116/262 (44%), Gaps = 42/262 (16%)
Query: 138 LRVVSLQNSVPQSWVKDFMRSQGKRL---KFQMNLCASIDGIVNN----LSTPFNK-LSF 189
LRV + + + S KDF + G ++ F N + N L P N+ L
Sbjct: 29 LRVYNWADYILPSVPKDFAKQTGIKVIWDTFDTNESLEAKLLTGNSGYDLVVPSNQFLDT 88
Query: 190 AIKKRFIEPIAEAEDQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIGYKK 249
IK + + +++ +W + K+ L++ND G +A PY +GT+ IG+
Sbjct: 89 QIKAGVFQKLDKSKLPNWQHQDPALLKL-LQTNDPGNQ------YAVPYMYGTVLIGFNP 141
Query: 250 SKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNSPREVI-VAGGKIAVQQNLALLA 301
+K + + AP++ W + PE + ++M++SP E++ +A + + N A
Sbjct: 142 AKVKAALGDNAPVDSWDLVFKPENMEKLKSCGVAMLDSPSEILPLALHYLGLDPNSQNPA 201
Query: 302 NQ-------------VRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRM--SNVAVVV- 345
+ + F+S Y+ GD+ VA+G+S R S VVV
Sbjct: 202 DYEKAKELMLKVRPYITYFNSAKYMTDIANGDICVAIGYSGSFYQFGNRAKESGNGVVVD 261
Query: 346 ---PKSGASLWADLWAIPAASR 364
PK GA +W D +AIP +++
Sbjct: 262 WRLPKEGAPIWFDTFAIPKSAK 283
>gi|212696357|ref|ZP_03304485.1| hypothetical protein ANHYDRO_00894 [Anaerococcus hydrogenalis DSM
7454]
gi|212676635|gb|EEB36242.1| hypothetical protein ANHYDRO_00894 [Anaerococcus hydrogenalis DSM
7454]
Length = 359
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 71/159 (44%), Gaps = 34/159 (21%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVI-- 285
DP + ++ PY WG+ I Y K++ + + WK+ W P+ G I + RE +
Sbjct: 127 DPNNQ-YSIPYFWGSFGIIYNNKKYKKEDFSS---WKNLWDPKFEGEILSFDGARETLGI 182
Query: 286 --VAGGK-----------------IAVQQNL-ALLANQVRLFDSTHYLKAFGIGDVWVAV 325
+A GK + +N+ A+LA+++R++ G+ V +
Sbjct: 183 GLLANGKSLNETDEKVLRQTKDELVGFMKNVKAILADEIRMY--------MAQGEADVGI 234
Query: 326 GWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 364
+S + A N++ +PK G+++W D IP S+
Sbjct: 235 TFSGEASMAESINPNLSYTIPKEGSNIWFDTMVIPKTSK 273
>gi|386288729|ref|ZP_10065869.1| polyamine ABC transporter [gamma proteobacterium BDW918]
gi|385278284|gb|EIF42256.1| polyamine ABC transporter [gamma proteobacterium BDW918]
Length = 352
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 111/265 (41%), Gaps = 49/265 (18%)
Query: 185 NKLSFAIKKRFIEPIAEAEDQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMA 244
N + IK+ F+ P+ D+ + + Y+ DP G +++ PY + T
Sbjct: 77 NAVEALIKQGFLMPL----DKSKLSNIGNSAAGYMNK----AYDP-GNVYSLPYAFTTTL 127
Query: 245 IGYKKSKFQNHNLAPIEDWKDPWWP----ELAGRISMVNSPREVIVA-----GGKIAVQQ 295
IGY ++K + P DW + P ++ G++++++ E+ A G I
Sbjct: 128 IGYNENKITELGIDP-ADWSIIFDPAVLAKIKGKVTVMDDAEELFGAALKYLGYSINDTN 186
Query: 296 NLALLANQVRL---------FDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------N 340
L Q + F+S+ Y+K +G++WVA G+SSD+ A +
Sbjct: 187 EKHLKEAQAVILKAKPYWAAFNSSSYIKELTVGNIWVAHGYSSDMFQARADAADAGRDFT 246
Query: 341 VAVVVPKSGASLWADLWAIPAASRLETKQIGGQVRGPSPLIHQWIEFCLQTARALPFKQE 400
V V+PK GA L D IP + R P L H +I F + A
Sbjct: 247 VNFVLPKQGAVLALDNMVIPK-----------KARNPE-LAHMFINFMMDPQNAAELTTI 294
Query: 401 VIPGASPSALESTLVKLPEELLKGK 425
V G +P+A + + E++LK K
Sbjct: 295 VGTG-NPNAAATPFID--EDILKIK 316
>gi|57866622|ref|YP_188273.1| spermidine/putrescine ABC transporter spermidine/putrescine-binding
protein [Staphylococcus epidermidis RP62A]
gi|418611619|ref|ZP_13174697.1| ABC transporter, solute-binding protein [Staphylococcus epidermidis
VCU117]
gi|418623457|ref|ZP_13186167.1| ABC transporter, solute-binding protein [Staphylococcus epidermidis
VCU125]
gi|418627407|ref|ZP_13189984.1| ABC transporter, solute-binding protein [Staphylococcus epidermidis
VCU126]
gi|418629760|ref|ZP_13192255.1| ABC transporter, solute-binding protein [Staphylococcus epidermidis
VCU127]
gi|420164817|ref|ZP_14671531.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Staphylococcus
epidermidis NIHLM088]
gi|420234280|ref|ZP_14738847.1| ABC transporter, solute-binding protein [Staphylococcus epidermidis
NIH051475]
gi|57637280|gb|AAW54068.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Staphylococcus
epidermidis RP62A]
gi|374822379|gb|EHR86405.1| ABC transporter, solute-binding protein [Staphylococcus epidermidis
VCU117]
gi|374829607|gb|EHR93406.1| ABC transporter, solute-binding protein [Staphylococcus epidermidis
VCU126]
gi|374830575|gb|EHR94344.1| ABC transporter, solute-binding protein [Staphylococcus epidermidis
VCU125]
gi|374832990|gb|EHR96691.1| ABC transporter, solute-binding protein [Staphylococcus epidermidis
VCU127]
gi|394236730|gb|EJD82234.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Staphylococcus
epidermidis NIHLM088]
gi|394304408|gb|EJE47811.1| ABC transporter, solute-binding protein [Staphylococcus epidermidis
NIH051475]
Length = 357
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 66/151 (43%), Gaps = 18/151 (11%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVIVA 287
DP + ++ PY +GT+ I Y K K+ N + W D + + I +V+ RE+I
Sbjct: 127 DPNNR-YSIPYFFGTVGILYDKEKYPNETF---DSWDDLYHSQFKNDILLVDGAREIIGM 182
Query: 288 G-GKIA-------------VQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLP 333
G K+ +++L LA QVR + VAV WS P
Sbjct: 183 GLNKLGYSLNDKNPTHIHQAEKDLHNLAPQVRGIVGDEITMMLQQNEGHVAVVWSGVAAP 242
Query: 334 AVKRMSNVAVVVPKSGASLWADLWAIPAASR 364
V+ + V+PK G++LW D IP ++
Sbjct: 243 LVQENTRYNYVIPKEGSNLWFDNMVIPKTAQ 273
>gi|418630689|ref|ZP_13193166.1| ABC transporter, solute-binding protein [Staphylococcus epidermidis
VCU128]
gi|420213112|ref|ZP_14718450.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Staphylococcus
epidermidis NIHLM001]
gi|374836897|gb|EHS00471.1| ABC transporter, solute-binding protein [Staphylococcus epidermidis
VCU128]
gi|394276731|gb|EJE21066.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Staphylococcus
epidermidis NIHLM001]
Length = 357
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 66/151 (43%), Gaps = 18/151 (11%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVIVA 287
DP + ++ PY +GT+ I Y K K+ N + W D + + I +V+ RE+I
Sbjct: 127 DPNNR-YSIPYFFGTVGILYDKEKYPNETF---DSWDDLYHSQFKNDILLVDGAREIIGM 182
Query: 288 G-GKIA-------------VQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLP 333
G K+ +++L LA QVR + VAV WS P
Sbjct: 183 GLNKLGYSLNDKNPTHIHQAEKDLHNLAPQVRGIVGDEITMMLQQNEGHVAVVWSGVAAP 242
Query: 334 AVKRMSNVAVVVPKSGASLWADLWAIPAASR 364
V+ + V+PK G++LW D IP ++
Sbjct: 243 LVQENTRYNYVIPKEGSNLWFDNMVIPKTAQ 273
>gi|420163650|ref|ZP_14670393.1| putative spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD
[Staphylococcus epidermidis NIHLM095]
gi|420167416|ref|ZP_14674076.1| putative spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD
[Staphylococcus epidermidis NIHLM087]
gi|394234073|gb|EJD79660.1| putative spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD
[Staphylococcus epidermidis NIHLM095]
gi|394238616|gb|EJD84078.1| putative spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD
[Staphylococcus epidermidis NIHLM087]
Length = 357
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 66/151 (43%), Gaps = 18/151 (11%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVIVA 287
DP + ++ PY +GT+ I Y K K+ N + W D + + I +V+ RE+I
Sbjct: 127 DPNNR-YSIPYFFGTVGILYDKEKYPNETF---DSWDDLYHSQFKNDILLVDGAREIIGM 182
Query: 288 G-GKIA-------------VQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLP 333
G K+ +++L LA QVR + VAV WS P
Sbjct: 183 GLNKLGYSLNDKNPTHIHQAEKDLHNLAPQVRGIVGDEITMMLQQNEGHVAVVWSGVAAP 242
Query: 334 AVKRMSNVAVVVPKSGASLWADLWAIPAASR 364
V+ + V+PK G++LW D IP ++
Sbjct: 243 LVQENTRYNYVIPKEGSNLWFDNMVIPKTAQ 273
>gi|374704387|ref|ZP_09711257.1| extracellular solute-binding protein [Pseudomonas sp. S9]
Length = 366
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 116/278 (41%), Gaps = 56/278 (20%)
Query: 122 QEFENWKWKTYALTVPLRVVSLQNSVPQSWVKDFMRSQGKRLK---FQMNLCASIDGIVN 178
+E + W Y L SVP KDF +S G +L F N +
Sbjct: 27 RELRVYNWAVYILP----------SVP----KDFAKSTGIKLTWDVFDTNESLEAKLLTG 72
Query: 179 N----LSTPFNK-LSFAIKKRFIEPIAEAEDQDWFKRLSHKWKVYLRSNDAGEIDPRGKI 233
N L P N L IK + + +++ +W K L + + +ND G
Sbjct: 73 NSGYDLVVPSNTFLDTQIKAGVFQKLDKSKLPNW-KNLDPELLKLMATNDPGNEH----- 126
Query: 234 WAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNSPREVI- 285
A PY +GT+ IG+ +K + AP++ W + E + ++M++SP +++
Sbjct: 127 -AVPYMYGTVIIGFNPAKVKEALGANAPVDSWDLIFKEENISKLKQCGVAMLDSPGDIMP 185
Query: 286 VAGGKIAVQQNLALLAN-------------QVRLFDSTHYLKAFGIGDVWVAVGWSSDVL 332
+A + + N A+ + F S Y+ G++ VAVG+S
Sbjct: 186 IALHYLGLNPNSTKKADYAKATDLMMKIRPNIAYFHSAKYMTDIANGNICVAVGYSGSFF 245
Query: 333 PAVKR---MSNVAVVV---PKSGASLWADLWAIPAASR 364
+ R + N VVV PK GA LW D +AIPA+++
Sbjct: 246 KSANRAKEVGNGVVVVWRLPKEGAPLWFDSFAIPASAQ 283
>gi|209547983|ref|YP_002279900.1| family 1 extracellular solute-binding protein [Rhizobium
leguminosarum bv. trifolii WSM2304]
gi|209533739|gb|ACI53674.1| extracellular solute-binding protein family 1 [Rhizobium
leguminosarum bv. trifolii WSM2304]
Length = 365
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 80/188 (42%), Gaps = 37/188 (19%)
Query: 204 DQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAP---- 259
D+ LS+ W V + E DP G A Y WGT IGY K L P
Sbjct: 99 DKSKLPNLSNMWDVIQQRT--AEYDP-GNEHAVDYMWGTDGIGYNVKKVA-EILGPDAKP 154
Query: 260 -IEDWKDPWWPELAGR-----ISMVNSPREVIVAGGKI--------------AVQQNLAL 299
+E DP ++A + I ++++P++VI + ++ L
Sbjct: 155 GLEVIFDP---KVAAKFKDCGIYILDTPKDVITTAFRYLGLDPNSTKAEDFKKAEELLTA 211
Query: 300 LANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLW 353
VR F S+ Y+ A GD+ +A G+S D+L A R + V VP GA +W
Sbjct: 212 ARPYVRKFHSSEYINALANGDICIAFGYSGDMLQARDRAAEAKNGVEVNYSVPPQGAQMW 271
Query: 354 ADLWAIPA 361
D+ AIPA
Sbjct: 272 FDMMAIPA 279
>gi|418616543|ref|ZP_13179467.1| ABC transporter, solute-binding protein [Staphylococcus epidermidis
VCU120]
gi|420182795|ref|ZP_14688929.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Staphylococcus
epidermidis NIHLM049]
gi|420194320|ref|ZP_14700136.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Staphylococcus
epidermidis NIHLM021]
gi|420213740|ref|ZP_14719042.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Staphylococcus
epidermidis NIH05005]
gi|420216888|ref|ZP_14722080.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Staphylococcus
epidermidis NIH05001]
gi|374820621|gb|EHR84697.1| ABC transporter, solute-binding protein [Staphylococcus epidermidis
VCU120]
gi|394249831|gb|EJD95041.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Staphylococcus
epidermidis NIHLM049]
gi|394265113|gb|EJE09777.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Staphylococcus
epidermidis NIHLM021]
gi|394284927|gb|EJE29022.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Staphylococcus
epidermidis NIH05005]
gi|394291106|gb|EJE34937.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Staphylococcus
epidermidis NIH05001]
Length = 357
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 66/151 (43%), Gaps = 18/151 (11%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVIVA 287
DP + ++ PY +GT+ I Y K K+ N + W D + + I +V+ RE+I
Sbjct: 127 DPNNR-YSIPYFFGTVGILYDKEKYPNETF---DSWDDLYHSQFKNDILLVDGAREIIGM 182
Query: 288 G-GKIA-------------VQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLP 333
G K+ +++L LA QVR + VAV WS P
Sbjct: 183 GLNKLGYSLNDKNPTHIYQAEKDLHNLAPQVRGIVGDEITMMLQQNEGHVAVVWSGVAAP 242
Query: 334 AVKRMSNVAVVVPKSGASLWADLWAIPAASR 364
V+ + V+PK G++LW D IP ++
Sbjct: 243 LVQENTRYNYVIPKEGSNLWFDNMVIPKTAQ 273
>gi|359299639|ref|ZP_09185478.1| spermidine/putrescine-binding periplasmic protein (SPBP)
[Haemophilus [parainfluenzae] CCUG 13788]
Length = 346
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 81/190 (42%), Gaps = 34/190 (17%)
Query: 227 IDPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREV-- 284
DP K ++ PY +G IG + + + I W D W E G++ ++N PREV
Sbjct: 116 FDPENK-YSLPYVYGLTGIGVNATDI---DPSTISSWGDLWRDEYKGKLLLMNDPREVFH 171
Query: 285 --IVAGGKI----------AVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVL 332
++ GK A + L + V +F+S + G+V V + WS
Sbjct: 172 IALLLDGKSPNSENEAEIKAAYERLQKIVPNVLVFNSDSPEMPYLQGEVSVGMQWSGSAH 231
Query: 333 PAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGQVRGPSPLIHQWIEFCLQTA 392
A ++ + PK GA LW D + IP + E K+ H++I+F L+
Sbjct: 232 RAKSENPDLKFIFPKEGAVLWMDNYVIPKGA--ENKEAA----------HKFIDFLLRPE 279
Query: 393 RALPFKQEVI 402
A +EVI
Sbjct: 280 SA----KEVI 285
>gi|253316355|ref|ZP_04839568.1| spermidine/putrescine-binding protein precursor-like protein
[Staphylococcus aureus subsp. aureus str. CF-Marseille]
Length = 357
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 68/149 (45%), Gaps = 17/149 (11%)
Query: 230 RGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVI-VAG 288
+G ++ PY +GT+ I Y K K+ N + + WK + P+ ++ +V+ RE+I ++
Sbjct: 128 KGNKYSLPYFFGTVGILYNKEKYPNESF---DSWKSLYNPKFKNQVLLVDGAREIIGMSL 184
Query: 289 GKIA-------------VQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAV 335
K+ +++L LA QVR + +AV WS P V
Sbjct: 185 NKLGYNLNDRNSHHLKEAERDLTKLAPQVRGVVGDEITMMLQQNEGNIAVVWSGVAAPLV 244
Query: 336 KRMSNVAVVVPKSGASLWADLWAIPAASR 364
+ V+PK G++LW D IP ++
Sbjct: 245 QEGDKYNYVIPKEGSNLWFDNMVIPKTAQ 273
>gi|292487788|ref|YP_003530663.1| putrescine ABC transporter substrate-binding protein [Erwinia
amylovora CFBP1430]
gi|292899018|ref|YP_003538387.1| putrescine ABC transporter substrate-binding protein [Erwinia
amylovora ATCC 49946]
gi|428784725|ref|ZP_19002216.1| putrescine ABC transport system, periplasmic component [Erwinia
amylovora ACW56400]
gi|291198866|emb|CBJ45976.1| putrescine ABC transporter, substrate-binding protein [Erwinia
amylovora ATCC 49946]
gi|291553210|emb|CBA20255.1| putrescine ABC transport system, periplasmic component [Erwinia
amylovora CFBP1430]
gi|312171906|emb|CBX80163.1| putrescine ABC transport system, periplasmic component [Erwinia
amylovora ATCC BAA-2158]
gi|426276287|gb|EKV54014.1| putrescine ABC transport system, periplasmic component [Erwinia
amylovora ACW56400]
Length = 369
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 71/165 (43%), Gaps = 29/165 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGY--KKSKFQNHNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP G +A PY W T IGY +K K AP++ W PE + +S +++
Sbjct: 123 DP-GNKYAIPYLWATTGIGYNVEKVKAALGKDAPVDSWDLVLKPENLAKLKSCGVSFLDA 181
Query: 281 PREVIVA----GGKI-----------AVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAV 325
P E+ GK A L L +R F S+ Y+ G+ VA+
Sbjct: 182 PEEIFATVLNYQGKDPNSSEAKDYSGAATDLLLKLRPNIRYFHSSQYINDLANGNTCVAI 241
Query: 326 GWSSDVLPAVKRM------SNVAVVVPKSGASLWADLWAIPAASR 364
GW+ DVL A R ++A +PK GA + D AIP ++
Sbjct: 242 GWAGDVLQAKNRALAAKNGVDIAYSIPKEGALAFFDTLAIPKDAK 286
>gi|114763504|ref|ZP_01442909.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pelagibaca bermudensis HTCC2601]
gi|114543784|gb|EAU46796.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Roseovarius sp. HTCC2601]
Length = 368
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 100/253 (39%), Gaps = 48/253 (18%)
Query: 204 DQDWFKRLSHKWKVYLRSNDAGEIDPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIE 261
D+ + + W V S+ + DP G +A Y WGT +G + K + AP+
Sbjct: 101 DKSKLPNIDNMWDVI--SDRTSKYDP-GNEYAINYMWGTTGLGVNEPKVREILGEDAPVT 157
Query: 262 DWK---DPWWPELAGR--ISMVNSPREVIVAG-------------GKIAVQQNLAL-LAN 302
W DP E + +++P E+I A IA +++ + +
Sbjct: 158 SWDLVFDPANMEKLAECGVMFLDAPAEMIPAALNYIGEDPDSHDPDVIAKAEDVFMPIRP 217
Query: 303 QVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADL 356
++ F S+ Y+ A GDV VAVGWS D+L A R + V+ P GA +W D
Sbjct: 218 YIQKFHSSEYINALANGDVCVAVGWSGDILQARDRAAEADNGVEVSYYAPDEGAQMWFDQ 277
Query: 357 WAIPAASRLETKQIGGQVRGPSP-LIHQWIEFCLQTARALPFKQEVIPGASPSALESTLV 415
AIP V P+P H ++ F + V A + L
Sbjct: 278 MAIP-------------VDAPNPEAAHTFLNFIMDAENMAAASNYVYYANGNEASQQYL- 323
Query: 416 KLPEELLKGKPSV 428
EE + G P++
Sbjct: 324 ---EEDVIGDPAI 333
>gi|418411544|ref|ZP_12984812.1| hypothetical protein HMPREF9281_00416 [Staphylococcus epidermidis
BVS058A4]
gi|410893088|gb|EKS40879.1| hypothetical protein HMPREF9281_00416 [Staphylococcus epidermidis
BVS058A4]
Length = 357
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 66/151 (43%), Gaps = 18/151 (11%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVIVA 287
DP + ++ PY +GT+ I Y K K+ N + W D + + I +V+ RE+I
Sbjct: 127 DPNNR-YSIPYFFGTVGILYDKEKYPNETF---DSWDDLYHSQFKNDILLVDGAREIIGM 182
Query: 288 G-GKIA-------------VQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLP 333
G K+ +++L LA QVR + VAV WS P
Sbjct: 183 GLNKLGYSLNDKNLTHIHQAEKDLHNLAPQVRGIVGDEITMMLQQNEGHVAVVWSGVAAP 242
Query: 334 AVKRMSNVAVVVPKSGASLWADLWAIPAASR 364
V+ + V+PK G++LW D IP ++
Sbjct: 243 LVQENTRYNYVIPKEGSNLWFDNMVIPKTAQ 273
>gi|418620873|ref|ZP_13183667.1| ABC transporter, solute-binding protein [Staphylococcus epidermidis
VCU123]
gi|374831080|gb|EHR94830.1| ABC transporter, solute-binding protein [Staphylococcus epidermidis
VCU123]
Length = 357
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 66/151 (43%), Gaps = 18/151 (11%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVIVA 287
DP + ++ PY +GT+ I Y K K+ N + W D + + I +V+ RE+I
Sbjct: 127 DPNNR-YSIPYFFGTVGILYDKEKYPNETF---DSWDDLYHSQFKNDILLVDGAREIIGM 182
Query: 288 G-GKIA-------------VQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLP 333
G K+ +++L LA QVR + VAV WS P
Sbjct: 183 GLNKLGYSLNDKNPTHIHQAEKDLHNLAPQVRGIVGDEITMMLQQNEGHVAVVWSGVAAP 242
Query: 334 AVKRMSNVAVVVPKSGASLWADLWAIPAASR 364
V+ + V+PK G++LW D IP ++
Sbjct: 243 LVQENTRYNYVIPKEGSNLWFDNMVIPKTAQ 273
>gi|167856022|ref|ZP_02478767.1| hypothetical protein HPS_02738 [Haemophilus parasuis 29755]
gi|167852861|gb|EDS24130.1| hypothetical protein HPS_02738 [Haemophilus parasuis 29755]
Length = 349
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 77/183 (42%), Gaps = 30/183 (16%)
Query: 226 EIDPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREV- 284
E DP K ++ PY +G IG S + + I W D W PE G++ ++N REV
Sbjct: 119 EFDPENK-YSLPYVYGLTGIGVNASDI---DPSTITSWGDLWKPEFKGKVLLMNDSREVF 174
Query: 285 ---IVAGGKI----------AVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDV 331
++ GK + L L V +F+S + G+V + + W+
Sbjct: 175 HIALLLDGKSPNTTNADEIKTAYERLTKLVPNVLVFNSDSPEMPYLQGEVAIGMQWTGSA 234
Query: 332 LPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGQVRGPSPLIHQWIEFCLQT 391
A ++ + PK GA +W D + IP ++ K+ H++I+F L+
Sbjct: 235 YRAKSENPDLKFIFPKEGAVIWMDNYVIPKNAK--NKEAA----------HKFIDFLLRP 282
Query: 392 ARA 394
A
Sbjct: 283 ESA 285
>gi|427730105|ref|YP_007076342.1| spermidine/putrescine-binding periplasmic protein [Nostoc sp. PCC
7524]
gi|427366024|gb|AFY48745.1| spermidine/putrescine-binding periplasmic protein [Nostoc sp. PCC
7524]
Length = 360
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 79/179 (44%), Gaps = 33/179 (18%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPE--LAGRISMVNSPREVI 285
DP+ + ++ P+ WGT + Y + AP EDW W + L R++++N REV+
Sbjct: 132 DPKNR-YSIPFNWGTTGLLYNSEILKQ---AP-EDWNYLWQNQALLNKRMTLLNDVREVM 186
Query: 286 VAGGKI--------------AVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDV 331
A ++ + L L + FD+ + GD+ +A+ +S+D
Sbjct: 187 GAVLRMLGYSYNSQNENEIKQAYEKLTELKPAIAAFDTDAWQNQMLAGDLVLAMCYSADA 246
Query: 332 LPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGQVRGPSPLIHQWIEFCLQ 390
+ K + V+P+SG+SLW D IP ++ I G + WI F LQ
Sbjct: 247 IRVSKENPKLKYVIPRSGSSLWTDTMVIPKSA----PNIDG--------AYAWINFILQ 293
>gi|388546311|ref|ZP_10149587.1| polyamine ABC transporter substrate-binding protein [Pseudomonas
sp. M47T1]
gi|388275548|gb|EIK95134.1| polyamine ABC transporter substrate-binding protein [Pseudomonas
sp. M47T1]
Length = 363
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 73/163 (44%), Gaps = 27/163 (16%)
Query: 226 EIDPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPE-----LAGRISMV 278
E++ G PY WG+ IGY K + + AP+ W + PE A +++V
Sbjct: 113 EVNDPGNRHGFPYMWGSTGIGYNIDKVKAVLGDNAPVGSWDLIFKPENISKLKACGVALV 172
Query: 279 NSPREVI-VAGGKIAV----------QQNLALLAN---QVRLFDSTHYLKAFGIGDVWVA 324
NS E++ + + + ++ ALL V FD+ Y GDV V
Sbjct: 173 NSGPELLPITLNYLGLPPHSKNPDDYKKAEALLMKIRPYVTYFDTARYTNDLANGDVCVV 232
Query: 325 VGWSSDVL------PAVKRMSNVAVVVPKSGASLWADLWAIPA 361
VG++ DVL A + N+ VP+ GA LW D+ A+PA
Sbjct: 233 VGYNGDVLQAQTTATAANKGVNIGYSVPREGAPLWFDMVAMPA 275
>gi|300716044|ref|YP_003740847.1| putrescine-binding periplasmic protein [Erwinia billingiae Eb661]
gi|299061880|emb|CAX58996.1| Putrescine-binding periplasmic protein [Erwinia billingiae Eb661]
Length = 369
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 71/165 (43%), Gaps = 29/165 (17%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQN--HNLAPIEDWKDPWWPELAGR-----ISMVNS 280
DP G +A PY W T IGY K + AP++ W PE + +S +++
Sbjct: 123 DP-GNKYAIPYLWATTGIGYNVDKVKAALGKDAPVDSWDLVLKPENLEKLKSCGVSFLDA 181
Query: 281 PREVIVAG----GKI-----------AVQQNLALLANQVRLFDSTHYLKAFGIGDVWVAV 325
P E+ GK A L L +R F S+ Y+ G+ VA+
Sbjct: 182 PEEIFATVLNYLGKDPNSTDPKDYSGAATDLLLKLRPSIRYFHSSQYINDLANGNTCVAI 241
Query: 326 GWSSDVLPAVKRM------SNVAVVVPKSGASLWADLWAIPAASR 364
GW+ DVL A R ++A +PK GA + D+ AIP ++
Sbjct: 242 GWAGDVLQAKNRAIEAKNGVHLAYSIPKEGALAFFDMLAIPKDAK 286
>gi|116051607|ref|YP_789554.1| polyamine ABC transporter [Pseudomonas aeruginosa UCBPP-PA14]
gi|421173152|ref|ZP_15630906.1| polyamine transport protein PotD [Pseudomonas aeruginosa CI27]
gi|115586828|gb|ABJ12843.1| polyamine ABC transporter protein [Pseudomonas aeruginosa
UCBPP-PA14]
gi|404536453|gb|EKA46093.1| polyamine transport protein PotD [Pseudomonas aeruginosa CI27]
Length = 354
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 95/218 (43%), Gaps = 41/218 (18%)
Query: 219 LRSNDAGEIDP---RGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWK---DPWWPE-L 271
L + AG +D +G ++ PY + T +GY K++ + P DW DP E +
Sbjct: 101 LSNEAAGYLDKDFDKGNRYSLPYAFTTTLVGYNKTELDKLGIDP-ADWSVIFDPAVLEKI 159
Query: 272 AGRISMVNSPREVIVAGGKIAVQ-------------QNLALLANQV-RLFDSTHYLKAFG 317
GR+++++ P+E+ A K Q L L A F+S+ Y+K
Sbjct: 160 KGRVTVMDDPQELFGAALKYLGHSANDTDPQHWKEAQALILAAKPYWAAFNSSSYIKELT 219
Query: 318 IGDVWVAVGWSSDVL------PAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIG 371
+G++WVA G+SSD+ A R V +P+ GA L D I S
Sbjct: 220 LGNIWVAHGYSSDMYQARADAEAAGRAFKVDFALPRQGAVLAIDNMVIHKGS-------- 271
Query: 372 GQVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSA 409
+ P L +++I+F L A ++ G +P+A
Sbjct: 272 ---KNPD-LAYRFIDFMLDGRNASELTNQIGTG-TPNA 304
>gi|418326858|ref|ZP_12938035.1| ABC transporter, solute-binding protein [Staphylococcus epidermidis
VCU071]
gi|420185169|ref|ZP_14691265.1| putative spermidine/putrescine ABC transporter periplasmic
substrate-binding protein [Staphylococcus epidermidis
NIHLM040]
gi|365224167|gb|EHM65433.1| ABC transporter, solute-binding protein [Staphylococcus epidermidis
VCU071]
gi|394255203|gb|EJE00160.1| putative spermidine/putrescine ABC transporter periplasmic
substrate-binding protein [Staphylococcus epidermidis
NIHLM040]
Length = 357
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 66/151 (43%), Gaps = 18/151 (11%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVIVA 287
DP + ++ PY +GT+ I Y K K+ N + W D + + I +V+ RE+I
Sbjct: 127 DPNNR-YSIPYFFGTVGILYDKEKYPNETF---DSWDDLYHSQFKNDILLVDGAREIIGM 182
Query: 288 G-GKIA-------------VQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLP 333
G K+ +++L LA QVR + VAV WS P
Sbjct: 183 GLNKLGYSLNDKNPTHIHQAEKDLHNLAPQVRGIVGDEITMMLQQNEGHVAVVWSGVAAP 242
Query: 334 AVKRMSNVAVVVPKSGASLWADLWAIPAASR 364
V+ + V+PK G++LW D IP ++
Sbjct: 243 LVQENTRYNYVIPKEGSNLWFDNMVIPKTAQ 273
>gi|77405839|ref|ZP_00782922.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
agalactiae H36B]
gi|77175549|gb|EAO78335.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
agalactiae H36B]
Length = 357
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 68/152 (44%), Gaps = 19/152 (12%)
Query: 227 IDPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVIV 286
DP+ K ++ PY WGT+ I Y + P + W D W PE +I +V+S REVI
Sbjct: 127 FDPKNK-YSIPYFWGTVGIVYNDQLVK----TPPKHWDDLWRPEFRNKIMLVDSAREVIG 181
Query: 287 AG----GKIAVQQNLALLANQVRLFDS---------THYLKAFGI-GDVWVAVGWSSDVL 332
G G +N++ L + D+ +K + I GD + V +S +
Sbjct: 182 VGLNSLGYGLNTKNISELKAASKKLDALTPNVKAIVADEMKGYMIQGDAAIGVTFSGEAR 241
Query: 333 PAVKRMSNVAVVVPKSGASLWADLWAIPAASR 364
+ ++ VVP G++LW D IP +
Sbjct: 242 EMLDGNKHLHYVVPSEGSNLWFDNIVIPKTVK 273
>gi|398816806|ref|ZP_10575447.1| spermidine/putrescine-binding periplasmic protein [Brevibacillus
sp. BC25]
gi|398031945|gb|EJL25313.1| spermidine/putrescine-binding periplasmic protein [Brevibacillus
sp. BC25]
Length = 351
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 57/141 (40%), Gaps = 18/141 (12%)
Query: 238 YRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREV----IVAGGKIAV 293
Y WG I Y K + + W D W GR+ M+N PREV ++ G
Sbjct: 133 YTWGITGIAYNKKYVKETPTS----WNDLWNEAYKGRVIMLNDPREVMGMALIKNGFSNS 188
Query: 294 QQNLALLAN----------QVRLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAV 343
N L V FD+ + + + W+ WS D + +V
Sbjct: 189 TTNTEELEKSFADLKKVVPNVVAFDTDNIKQKMIAEEAWIGTVWSGDAAFIHAQNPDVEY 248
Query: 344 VVPKSGASLWADLWAIPAASR 364
V+PK GA++WAD AIP ++
Sbjct: 249 VIPKEGATIWADTLAIPKGAK 269
>gi|27467718|ref|NP_764355.1| potD protein [Staphylococcus epidermidis ATCC 12228]
gi|251810555|ref|ZP_04825028.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Staphylococcus epidermidis
BCM-HMP0060]
gi|282876538|ref|ZP_06285403.1| bacterial extracellular solute-binding protein [Staphylococcus
epidermidis SK135]
gi|417645403|ref|ZP_12295306.1| ABC transporter, solute-binding protein [Staphylococcus epidermidis
VCU144]
gi|417657584|ref|ZP_12307244.1| putative spermidine/putrescine ABC transporter [Staphylococcus
epidermidis VCU028]
gi|417911560|ref|ZP_12555264.1| ABC transporter, solute-binding protein [Staphylococcus epidermidis
VCU105]
gi|417913958|ref|ZP_12557615.1| ABC transporter, solute-binding protein [Staphylococcus epidermidis
VCU109]
gi|418604032|ref|ZP_13167401.1| ABC transporter, solute-binding protein [Staphylococcus epidermidis
VCU041]
gi|418607631|ref|ZP_13170855.1| ABC transporter, solute-binding protein [Staphylococcus epidermidis
VCU057]
gi|418610416|ref|ZP_13173530.1| ABC transporter, solute-binding protein [Staphylococcus epidermidis
VCU065]
gi|418664394|ref|ZP_13225876.1| ABC transporter, solute-binding protein [Staphylococcus epidermidis
VCU081]
gi|419769920|ref|ZP_14296010.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus IS-250]
gi|419772705|ref|ZP_14298732.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus IS-K]
gi|420170079|ref|ZP_14676652.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Staphylococcus
epidermidis NIHLM070]
gi|420173690|ref|ZP_14680180.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Staphylococcus
epidermidis NIHLM067]
gi|420187673|ref|ZP_14693692.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Staphylococcus
epidermidis NIHLM039]
gi|420196784|ref|ZP_14702521.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Staphylococcus
epidermidis NIHLM020]
gi|420203267|ref|ZP_14708849.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Staphylococcus
epidermidis NIHLM018]
gi|420206556|ref|ZP_14712065.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Staphylococcus
epidermidis NIHLM008]
gi|420210189|ref|ZP_14715619.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Staphylococcus
epidermidis NIHLM003]
gi|420219482|ref|ZP_14724499.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Staphylococcus
epidermidis NIH04008]
gi|420226914|ref|ZP_14731689.1| ABC transporter, solute-binding protein [Staphylococcus epidermidis
NIH05003]
gi|420231599|ref|ZP_14736246.1| ABC transporter, solute-binding protein [Staphylococcus epidermidis
NIH051668]
gi|421607375|ref|ZP_16048620.1| spermidine/putrescine ABC transporter spermidine/putrescine-binding
protein [Staphylococcus epidermidis AU12-03]
gi|27315262|gb|AAO04397.1|AE016746_187 potD protein [Staphylococcus epidermidis ATCC 12228]
gi|251805966|gb|EES58623.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Staphylococcus epidermidis
BCM-HMP0060]
gi|281294626|gb|EFA87155.1| bacterial extracellular solute-binding protein [Staphylococcus
epidermidis SK135]
gi|329732835|gb|EGG69181.1| ABC transporter, solute-binding protein [Staphylococcus epidermidis
VCU144]
gi|329734239|gb|EGG70555.1| putative spermidine/putrescine ABC transporter [Staphylococcus
epidermidis VCU028]
gi|341652840|gb|EGS76616.1| ABC transporter, solute-binding protein [Staphylococcus epidermidis
VCU105]
gi|341653996|gb|EGS77754.1| ABC transporter, solute-binding protein [Staphylococcus epidermidis
VCU109]
gi|374403985|gb|EHQ74974.1| ABC transporter, solute-binding protein [Staphylococcus epidermidis
VCU057]
gi|374404524|gb|EHQ75496.1| ABC transporter, solute-binding protein [Staphylococcus epidermidis
VCU065]
gi|374406049|gb|EHQ76955.1| ABC transporter, solute-binding protein [Staphylococcus epidermidis
VCU041]
gi|374410553|gb|EHQ81297.1| ABC transporter, solute-binding protein [Staphylococcus epidermidis
VCU081]
gi|383357733|gb|EID35198.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus IS-250]
gi|383358960|gb|EID36399.1| ABC transporter, solute-binding protein [Staphylococcus aureus
subsp. aureus IS-K]
gi|394239500|gb|EJD84939.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Staphylococcus
epidermidis NIHLM067]
gi|394242674|gb|EJD88064.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Staphylococcus
epidermidis NIHLM070]
gi|394255832|gb|EJE00771.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Staphylococcus
epidermidis NIHLM039]
gi|394266988|gb|EJE11597.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Staphylococcus
epidermidis NIHLM020]
gi|394268324|gb|EJE12887.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Staphylococcus
epidermidis NIHLM018]
gi|394276746|gb|EJE21080.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Staphylococcus
epidermidis NIHLM003]
gi|394277501|gb|EJE21823.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Staphylococcus
epidermidis NIHLM008]
gi|394288972|gb|EJE32867.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Staphylococcus
epidermidis NIH04008]
gi|394297912|gb|EJE41502.1| ABC transporter, solute-binding protein [Staphylococcus epidermidis
NIH05003]
gi|394302566|gb|EJE46010.1| ABC transporter, solute-binding protein [Staphylococcus epidermidis
NIH051668]
gi|406656909|gb|EKC83303.1| spermidine/putrescine ABC transporter spermidine/putrescine-binding
protein [Staphylococcus epidermidis AU12-03]
Length = 357
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 66/151 (43%), Gaps = 18/151 (11%)
Query: 228 DPRGKIWAAPYRWGTMAIGYKKSKFQNHNLAPIEDWKDPWWPELAGRISMVNSPREVIVA 287
DP + ++ PY +GT+ I Y K K+ N + W D + + I +V+ RE+I
Sbjct: 127 DPNNR-YSIPYFFGTVGILYDKEKYPNETF---DSWDDLYHSQFKNDILLVDGAREIIGM 182
Query: 288 G-GKIA-------------VQQNLALLANQVRLFDSTHYLKAFGIGDVWVAVGWSSDVLP 333
G K+ +++L LA QVR + VAV WS P
Sbjct: 183 GLNKLGYSLNDKNPTHIHQAEKDLHNLAPQVRGIVGDEITMMLQQNEGHVAVVWSGVAAP 242
Query: 334 AVKRMSNVAVVVPKSGASLWADLWAIPAASR 364
V+ + V+PK G++LW D IP ++
Sbjct: 243 LVQENTRYNYVIPKEGSNLWFDNMVIPKTAQ 273
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.133 0.411
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,237,459,226
Number of Sequences: 23463169
Number of extensions: 305112488
Number of successful extensions: 751458
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 472
Number of HSP's successfully gapped in prelim test: 2869
Number of HSP's that attempted gapping in prelim test: 745910
Number of HSP's gapped (non-prelim): 3569
length of query: 439
length of database: 8,064,228,071
effective HSP length: 146
effective length of query: 293
effective length of database: 8,933,572,693
effective search space: 2617536799049
effective search space used: 2617536799049
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 78 (34.7 bits)