Query 044098
Match_columns 201
No_of_seqs 243 out of 1660
Neff 7.0
Searched_HMMs 29240
Date Mon Mar 25 19:56:49 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/044098.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/044098hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4eld_A MJ16.5-P1, small heat s 99.9 7.4E-27 2.5E-31 185.1 13.5 101 96-198 58-160 (161)
2 1gme_A Heat shock protein 16.9 99.9 4.4E-26 1.5E-30 179.1 14.5 107 93-201 42-150 (151)
3 3gla_A Low molecular weight he 99.9 2.7E-25 9.2E-30 162.6 13.3 96 93-189 3-99 (100)
4 3aab_A Putative uncharacterize 99.9 5.8E-26 2E-30 172.4 10.0 110 77-190 5-118 (123)
5 4fei_A Heat shock protein-rela 99.9 2.6E-24 8.7E-29 158.4 14.6 93 93-190 5-97 (102)
6 3l1e_A Alpha-crystallin A chai 99.9 2.1E-23 7.2E-28 154.7 13.4 89 95-190 3-92 (106)
7 2wj5_A Heat shock protein beta 99.9 4.7E-23 1.6E-27 151.5 11.5 97 96-200 3-100 (101)
8 3q9p_A Heat shock protein beta 99.9 9.9E-23 3.4E-27 145.4 11.0 83 99-188 2-85 (85)
9 2klr_A Alpha-crystallin B chai 99.9 7.8E-23 2.7E-27 164.3 10.2 98 96-200 65-163 (175)
10 2bol_A TSP36, small heat shock 99.9 2E-22 6.9E-27 175.1 5.7 97 93-199 97-198 (314)
11 2y1y_A Alpha-crystallin B chai 99.9 3.9E-21 1.3E-25 138.3 10.8 84 100-190 2-86 (90)
12 2bol_A TSP36, small heat shock 99.8 7E-19 2.4E-23 152.8 11.2 91 94-188 220-314 (314)
13 1rl1_A Suppressor of G2 allele 99.0 1.6E-09 5.6E-14 80.1 9.8 82 93-189 8-89 (114)
14 2xcm_C SGT1-like protein, cyto 99.0 1.4E-09 4.7E-14 77.2 8.7 81 94-189 2-82 (92)
15 3eud_A Protein SHQ1; CS domain 98.3 1.1E-05 3.6E-10 59.8 10.9 80 93-191 16-99 (115)
16 2k8q_A Protein SHQ1; beta-sand 98.2 4E-06 1.4E-10 64.0 6.5 79 93-190 2-84 (134)
17 3igf_A ALL4481 protein; two-do 98.1 9.2E-06 3.1E-10 71.8 9.5 73 94-187 297-369 (374)
18 1x5m_A Calcyclin-binding prote 97.9 0.0002 6.9E-09 53.7 11.8 82 94-190 20-105 (127)
19 1wgv_A KIAA1068 protein; CS do 97.7 0.00068 2.3E-08 50.5 12.4 82 93-189 18-102 (124)
20 1ejf_A Progesterone receptor P 97.7 0.00025 8.6E-09 53.0 9.6 78 96-189 5-82 (125)
21 1wh0_A Ubiquitin carboxyl-term 97.7 0.00027 9.3E-09 53.8 9.2 92 94-189 19-112 (134)
22 3qor_A Nuclear migration prote 97.7 0.0013 4.5E-08 48.9 12.8 79 93-189 15-97 (121)
23 1wfi_A Nuclear distribution ge 97.6 0.00093 3.2E-08 50.2 11.0 79 93-189 6-88 (131)
24 2o30_A Nuclear movement protei 97.4 0.0011 3.7E-08 49.9 9.8 76 94-188 4-80 (131)
25 2rh0_A NUDC domain-containing 97.4 0.0021 7.1E-08 50.0 11.1 78 93-189 12-91 (157)
26 2kmw_A Uncharacterized protein 97.3 0.0011 3.7E-08 51.3 8.1 78 94-189 4-82 (150)
27 2cg9_X CO-chaperone protein SB 97.1 0.00024 8.3E-09 53.9 3.0 84 94-188 6-97 (134)
28 3q9p_A Heat shock protein beta 73.7 8.2 0.00028 26.0 5.6 34 153-188 7-40 (85)
29 3gla_A Low molecular weight he 70.9 12 0.0004 25.7 6.1 36 152-189 13-48 (100)
30 4eld_A MJ16.5-P1, small heat s 68.6 19 0.00066 27.0 7.4 34 153-188 66-99 (161)
31 2y1y_A Alpha-crystallin B chai 67.3 9.9 0.00034 25.8 4.9 33 153-187 6-38 (90)
32 2wj5_A Heat shock protein beta 64.5 12 0.00039 26.1 4.9 34 153-188 11-44 (101)
33 4fei_A Heat shock protein-rela 62.2 14 0.00048 25.6 5.0 34 105-138 62-96 (102)
34 2nwt_A UPF0165 protein AF_2212 62.0 8.5 0.00029 25.5 3.5 17 169-185 3-19 (69)
35 3l1e_A Alpha-crystallin A chai 60.9 16 0.00054 25.6 5.2 34 152-187 11-44 (106)
36 1gme_A Heat shock protein 16.9 55.4 37 0.0013 25.2 6.7 34 154-189 54-88 (151)
37 3aab_A Putative uncharacterize 54.2 30 0.001 24.7 5.8 35 153-189 34-69 (123)
38 1vq8_E 50S ribosomal protein L 44.0 25 0.00085 27.4 4.1 46 117-187 9-55 (178)
39 2klr_A Alpha-crystallin B chai 44.0 29 0.00099 26.7 4.6 34 152-187 72-105 (175)
40 1rl6_A Protein (ribosomal prot 43.7 63 0.0022 25.0 6.5 46 117-187 11-56 (177)
41 1rl1_A Suppressor of G2 allele 42.7 37 0.0013 23.6 4.6 34 103-136 53-87 (114)
42 2cql_A OK/SW-CL.103, 60S ribos 38.6 23 0.00079 24.9 2.9 19 117-135 20-38 (100)
43 1nkw_E 50S ribosomal protein L 36.2 46 0.0016 26.7 4.6 46 117-187 39-84 (212)
44 2xcm_C SGT1-like protein, cyto 36.1 31 0.0011 22.8 3.2 34 103-136 46-80 (92)
45 1ew4_A CYAY protein; friedreic 35.9 24 0.00083 25.0 2.7 17 170-186 29-45 (106)
46 2ks0_A Uncharacterized protein 35.0 18 0.00063 24.0 1.8 23 114-136 17-39 (71)
47 2gjh_A Designed protein; oblig 33.6 25 0.00087 21.8 2.1 22 116-137 31-52 (62)
48 1qys_A TOP7; alpha-beta, novel 32.5 42 0.0014 22.9 3.3 23 115-137 74-96 (106)
49 3ug3_A Alpha-L-arabinofuranosi 32.4 1.4E+02 0.0048 26.9 7.8 34 162-201 471-504 (504)
50 3iz5_F 60S ribosomal protein L 32.2 50 0.0017 25.9 4.2 46 117-186 13-60 (190)
51 2kgs_A Uncharacterized protein 31.2 42 0.0014 24.5 3.4 27 112-138 2-28 (132)
52 3j21_F 50S ribosomal protein L 30.2 47 0.0016 25.9 3.7 45 117-185 14-58 (184)
53 3oeq_A Frataxin homolog, mitoc 29.2 32 0.0011 25.2 2.4 16 171-186 49-64 (123)
54 3jx8_A Putative lipoprotein; s 28.5 82 0.0028 25.1 5.1 40 97-136 34-73 (250)
55 3t3l_A Frataxin, mitochondrial 27.0 45 0.0015 24.6 2.9 17 169-185 40-56 (129)
56 2o30_A Nuclear movement protei 25.6 95 0.0032 22.3 4.5 30 154-184 15-44 (131)
57 3qqz_A Putative uncharacterize 24.7 2.1E+02 0.007 23.0 6.9 64 111-183 21-86 (255)
58 3rd4_A Uncharacterized protein 24.3 51 0.0017 23.3 2.7 25 101-125 33-57 (100)
59 2qzi_A Uncharacterized protein 21.1 89 0.0031 22.1 3.4 27 161-187 76-102 (103)
60 3pet_A Putative adhesin; right 20.1 1.2E+02 0.0042 23.6 4.5 32 169-200 54-85 (221)
No 1
>4eld_A MJ16.5-P1, small heat shock protein HSP16.5; chaperone; 2.70A {Methanocaldococcus jannaschii} PDB: 1shs_A
Probab=99.94 E-value=7.4e-27 Score=185.09 Aligned_cols=101 Identities=21% Similarity=0.298 Sum_probs=86.6
Q ss_pred ceEEEEcCCeEEEEEEcCCCcccceEEEEECCEEEEEEeecCcCCCCCCCc-ccce-eeeEEEEEEECCCCCCCCCceEE
Q 044098 96 GWLAKEDDNNLILKMDMPGLSKEDVRVSVQQNTQIIKGEGPQNESESGGGD-DDQE-NGRRYSTRIDLPSNLYKFDDIKA 173 (201)
Q Consensus 96 ~~dv~E~~d~y~l~~dlPG~~~edI~V~v~~~~L~I~g~~~~~~~~~~~~~-~~e~-~~~~f~r~i~LP~~v~d~~~I~A 173 (201)
++||+|++++|+|+++|||++++||+|+++++.|+|+|+++.....+...+ ..|+ .++.|+|+|.||.+| |.++|+|
T Consensus 58 pvdi~e~~~~~~v~~dlPG~~~edi~V~~~~~~L~I~g~~~~~~~~~~~~~~~~Er~~~g~f~R~~~LP~~v-d~~~i~A 136 (161)
T 4eld_A 58 PISIIEGDQHIKVIAWLPGVNKEDIILNAVGDTLEIRAKRSPLMITESERIIYSEIPEEEEIYRTIKLPATV-KEENASA 136 (161)
T ss_dssp CEEEEECSSEEEEEEECTTCCGGGEEEEEETTEEEEEEECCCCCCCSSCEEEEECSCCCCEEEEEEECSSCB-CGGGCEE
T ss_pred ceeEEEeCCEEEEEEECCCCChHhEEEEEECCEEEEEEEEcccccCCCceEEEEEeeccccEEEEEECCCCc-ccccEEE
Confidence 399999999999999999999999999999999999999887543333333 3578 899999999999999 9999999
Q ss_pred EEECCEEEEEEeCcCcccCCCeeEe
Q 044098 174 GMKNGVLKIVVPKVKEDEAKNVFKV 198 (201)
Q Consensus 174 ~~~nGvL~I~lPK~~~~~~~~~i~I 198 (201)
+|+||||+|++||.... +++.|.|
T Consensus 137 ~~~nGvL~I~lpK~~~~-~~r~I~I 160 (161)
T 4eld_A 137 KFENGVLSVILPKAESS-IKKGINI 160 (161)
T ss_dssp EEETTEEEEEEEBCGGG-SCCCCCC
T ss_pred EEECCEEEEEEEcCCCC-CCcEeec
Confidence 99999999999998554 3444444
No 2
>1gme_A Heat shock protein 16.9B; small heat shock protein, chaperone, alpha-crystallin; 2.70A {Triticum aestivum} SCOP: b.15.1.1 PDB: 2h50_A 2h53_A 2byu_A
Probab=99.94 E-value=4.4e-26 Score=179.12 Aligned_cols=107 Identities=26% Similarity=0.480 Sum_probs=92.5
Q ss_pred CCcceEEEEcCCeEEEEEEcCCCcccceEEEEE-CCEEEEEEeecCcCCCCCCCcc-cceeeeEEEEEEECCCCCCCCCc
Q 044098 93 SRRGWLAKEDDNNLILKMDMPGLSKEDVRVSVQ-QNTQIIKGEGPQNESESGGGDD-DQENGRRYSTRIDLPSNLYKFDD 170 (201)
Q Consensus 93 ~~p~~dv~E~~d~y~l~~dlPG~~~edI~V~v~-~~~L~I~g~~~~~~~~~~~~~~-~e~~~~~f~r~i~LP~~v~d~~~ 170 (201)
+.|.+||+|++++|+|.++|||++++||+|+++ ++.|+|+|++..+.+++...++ .|+.++.|.|+|.||.+| +.++
T Consensus 42 ~~p~~di~e~~d~~~v~~dlPGv~kedI~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~Er~~g~F~R~~~LP~~v-d~~~ 120 (151)
T 1gme_A 42 ANARMDWKETPEAHVFKADLPGVKKEEVKVEVEDGNVLVVSGERTKEKEDKNDKWHRVERSSGKFVRRFRLLEDA-KVEE 120 (151)
T ss_dssp GGGCEEEEECSSEEEEEEECTTCCGGGEEEEEETTTEEEEEECCCCCCCCTTCEEEECCCCCCCEEEEEECSSCC-CGGG
T ss_pred cCCceEEEEcCCEEEEEEECCCCChHHEEEEEecCCEEEEEEEEccccccCCceEEEEeEeccEEEEEEECCCCc-cccc
Confidence 678999999999999999999999999999995 6899999998876544444443 588899999999999999 9999
Q ss_pred eEEEEECCEEEEEEeCcCcccCCCeeEeecC
Q 044098 171 IKAGMKNGVLKIVVPKVKEDEAKNVFKVNVE 201 (201)
Q Consensus 171 I~A~~~nGvL~I~lPK~~~~~~~~~i~I~IE 201 (201)
|+|+|+||||+|++||..+. +++.++|+|+
T Consensus 121 i~A~~~nGvL~I~lPK~~~~-~~~~~~I~I~ 150 (151)
T 1gme_A 121 VKAGLENGVLTVTVPKAEVK-KPEVKAIQIS 150 (151)
T ss_dssp CEEEEETTEEEEEEECCCCC-TTCCCCCCCC
T ss_pred eEEEEECCEEEEEEEccCcC-CCCCeEeeeC
Confidence 99999999999999998654 3556667664
No 3
>3gla_A Low molecular weight heat shock protein; HSPA, SHP, SHSP, high resolution, stress response, chaperone; 1.64A {Xanthomonas axonopodis PV} PDB: 3gt6_A 3guf_A
Probab=99.93 E-value=2.7e-25 Score=162.65 Aligned_cols=96 Identities=26% Similarity=0.366 Sum_probs=85.4
Q ss_pred CCcceEEEEcCCeEEEEEEcCCCcccceEEEEECCEEEEEEeecCcCCCCCCCcc-cceeeeEEEEEEECCCCCCCCCce
Q 044098 93 SRRGWLAKEDDNNLILKMDMPGLSKEDVRVSVQQNTQIIKGEGPQNESESGGGDD-DQENGRRYSTRIDLPSNLYKFDDI 171 (201)
Q Consensus 93 ~~p~~dv~E~~d~y~l~~dlPG~~~edI~V~v~~~~L~I~g~~~~~~~~~~~~~~-~e~~~~~f~r~i~LP~~v~d~~~I 171 (201)
|.|++||+|++++|+|.++|||++++||+|+++++.|+|+|++.....++...+. .|+.++.|+|+|.||.+| |.++|
T Consensus 3 ~~P~~di~e~~~~~~v~~~lPG~~~edi~v~~~~~~L~I~g~~~~~~~~~~~~~~~~er~~g~f~r~~~LP~~v-d~~~i 81 (100)
T 3gla_A 3 WVPRVDIKEEVNHFVLYADLPGIDPSQIEVQMDKGILSIRGERKSESSTETERFSRIERRYGSFHRRFALPDSA-DADGI 81 (100)
T ss_dssp SCCCEEEEECSSEEEEEEECTTSCGGGCEEEEETTEEEEEEEECCGGGSSGGGEEEECCCCEEEEEEEECCTTB-CTTSC
T ss_pred ccCcEEEEECCCEEEEEEECCCCCHHHEEEEEECCEEEEEEEEcCcCccCCccEEEEeecceEEEEEEECCCCc-ChHHe
Confidence 6899999999999999999999999999999999999999999876543333333 588899999999999999 99999
Q ss_pred EEEEECCEEEEEEeCcCc
Q 044098 172 KAGMKNGVLKIVVPKVKE 189 (201)
Q Consensus 172 ~A~~~nGvL~I~lPK~~~ 189 (201)
+|.|+||+|+|++||..+
T Consensus 82 ~A~~~~GvL~I~~pK~~~ 99 (100)
T 3gla_A 82 TAAGRNGVLEIRIPKRPA 99 (100)
T ss_dssp EEEEETTEEEEEEEBC--
T ss_pred EEEEeCCEEEEEEecCCC
Confidence 999999999999999853
No 4
>3aab_A Putative uncharacterized protein ST1653; alpha-crystallin domain, chaperone; 1.85A {Sulfolobus tokodaii} PDB: 3aac_A
Probab=99.93 E-value=5.8e-26 Score=172.42 Aligned_cols=110 Identities=23% Similarity=0.220 Sum_probs=85.0
Q ss_pred HHHHHHhcCCCCCCC--CCCcceEEEEcCCeEEEEEEcCCCcccceEEEEEC-CEEEEEEeecCcCCCCCCCcccceeee
Q 044098 77 LNLMDQFLDNPFVSP--VSRRGWLAKEDDNNLILKMDMPGLSKEDVRVSVQQ-NTQIIKGEGPQNESESGGGDDDQENGR 153 (201)
Q Consensus 77 ~~~md~lf~~~~~~~--~~~p~~dv~E~~d~y~l~~dlPG~~~edI~V~v~~-~~L~I~g~~~~~~~~~~~~~~~e~~~~ 153 (201)
+++|+++|++.+... .+.|++||+|++++|+|.++|||++++||+|++++ +.|+|+|++.... +......|+.+
T Consensus 5 ~~em~~~~~~~~~~~~~~~~P~~di~e~~~~~~v~~~lPG~~~edi~V~v~~~~~L~I~g~~~~~~--~~~~~~~Er~~- 81 (123)
T 3aab_A 5 GKELQKRSEELSRGFYELVYPPVDMYEEGGYLVVVADLAGFNKEKIKARVSGQNELIIEAEREITE--PGVKYLTQRPK- 81 (123)
T ss_dssp ---------CCCHHHHHHHCSCEEEEEETTEEEEEEECCSCCGGGCEEEEETTTEEEEEEECCCCC--CSCEEEECSCS-
T ss_pred HHHHHHHHHHHhhhccccCCCcEEEEEcCCEEEEEEECCCCCHHHEEEEEeCCCEEEEEEEEeccC--CCeEEEEEEeE-
Confidence 344444444433211 14689999999999999999999999999999999 9999999987654 22223457778
Q ss_pred EEEEEEECCCCCCCCCce-EEEEECCEEEEEEeCcCcc
Q 044098 154 RYSTRIDLPSNLYKFDDI-KAGMKNGVLKIVVPKVKED 190 (201)
Q Consensus 154 ~f~r~i~LP~~v~d~~~I-~A~~~nGvL~I~lPK~~~~ 190 (201)
.|.|+|.||.+| +.++| +|.|+||+|+|++||....
T Consensus 82 ~f~R~~~LP~~v-d~~~i~~A~~~~GvL~I~lPK~~~~ 118 (123)
T 3aab_A 82 YVRKVIRLPYNV-AKDAEISGKYENGVLTIRIPIAGTS 118 (123)
T ss_dssp EEEEEEECSSEE-CTTCCCEEEEETTEEEEEEEGGGEE
T ss_pred EEEEEEECCCCc-CcchhCeeEEcCCEEEEEEEcCCCC
Confidence 999999999999 99999 9999999999999998543
No 5
>4fei_A Heat shock protein-related protein; stress response, alpha-crystallin domain fold, aggregates, C chaperone; 2.40A {Deinococcus radiodurans}
Probab=99.92 E-value=2.6e-24 Score=158.40 Aligned_cols=93 Identities=16% Similarity=0.256 Sum_probs=84.6
Q ss_pred CCcceEEEEcCCeEEEEEEcCCCcccceEEEEECCEEEEEEeecCcCCCCCCCcccceeeeEEEEEEECCCCCCCCCceE
Q 044098 93 SRRGWLAKEDDNNLILKMDMPGLSKEDVRVSVQQNTQIIKGEGPQNESESGGGDDDQENGRRYSTRIDLPSNLYKFDDIK 172 (201)
Q Consensus 93 ~~p~~dv~E~~d~y~l~~dlPG~~~edI~V~v~~~~L~I~g~~~~~~~~~~~~~~~e~~~~~f~r~i~LP~~v~d~~~I~ 172 (201)
+.|++||+|++++|+|.++|||++++||+|+++++.|+|+|+++.+ ......|+.++.|.|+|.||.+| |.++|+
T Consensus 5 ~~P~~di~e~~~~~~v~~~lPG~~~edi~v~~~~~~L~I~g~~~~~----~~~~~~er~~g~f~R~~~LP~~v-d~~~i~ 79 (102)
T 4fei_A 5 WTPAADWRDAGTHLDLLLDVPGVDAGTLALAEDGGQLTVSGERPGT----EHLLRSERPSGRFVRELAFPEPV-RPASGV 79 (102)
T ss_dssp CCCCEEEEEETTEEEEEEECTTCCGGGCEEEEETTEEEEEEEECCC----SSCSSCCSEEEEEEEEEECSSCB-CTTCCE
T ss_pred ccCcEEEEEcCCEEEEEEECCCCchHhEEEEEECCEEEEEEEEecC----CCEEEEEEeccEEEEEEECCCCc-chhHcE
Confidence 6899999999999999999999999999999999999999998643 22245688999999999999999 999999
Q ss_pred EEEECCEEEEEEeCcCcc
Q 044098 173 AGMKNGVLKIVVPKVKED 190 (201)
Q Consensus 173 A~~~nGvL~I~lPK~~~~ 190 (201)
|+|+||+|+|++||.++.
T Consensus 80 A~~~~GvL~I~lpK~~~~ 97 (102)
T 4fei_A 80 ASLAGGVLTVRFEKLRPT 97 (102)
T ss_dssp EEEETTEEEEEEEBSSCC
T ss_pred EEEECCEEEEEEEccCcc
Confidence 999999999999998654
No 6
>3l1e_A Alpha-crystallin A chain; lens transparency, polydispersity, protein aggregation, CRYS eye lens protein, chaperone; 1.15A {Bos taurus} PDB: 3l1f_A 3n3e_A
Probab=99.90 E-value=2.1e-23 Score=154.72 Aligned_cols=89 Identities=24% Similarity=0.400 Sum_probs=78.4
Q ss_pred cceEEEEcCCeEEEEEEcCCCcccceEEEEECCEEEEEEeecCcCCCCCCCcccceeeeEEEEEEECCCCCCCCCceEEE
Q 044098 95 RGWLAKEDDNNLILKMDMPGLSKEDVRVSVQQNTQIIKGEGPQNESESGGGDDDQENGRRYSTRIDLPSNLYKFDDIKAG 174 (201)
Q Consensus 95 p~~dv~E~~d~y~l~~dlPG~~~edI~V~v~~~~L~I~g~~~~~~~~~~~~~~~e~~~~~f~r~i~LP~~v~d~~~I~A~ 174 (201)
...+|+|++++|+|.++|||++++||+|+++++.|+|+|++....+ ..+...+.|.|+|.||.+| |.++|+|.
T Consensus 3 g~~~i~e~~~~~~v~~dlPG~~~edi~V~v~~~~L~I~g~~~~~~~------~~~~~~~eF~R~~~LP~~v-d~~~i~A~ 75 (106)
T 3l1e_A 3 GISEVRSDRDKFVIFLDVKHFSPEDLTVKVQEDFVEIHGKHNERQD------DHGYISREFHRRYRLPSNV-DQSALSCS 75 (106)
T ss_dssp CSEEEEECSSEEEEEEECTTSCGGGEEEEEETTEEEEEEEEEEEET------TTEEEEEEEEEEEECCTTB-CTTSCEEE
T ss_pred CceEEEEcCCEEEEEEECCCCChHHEEEEEECCEEEEEEEEccccC------CCCEEEEEEEEEEECCCCc-ChhHcEEE
Confidence 3479999999999999999999999999999999999999764321 1234556799999999999 99999999
Q ss_pred E-ECCEEEEEEeCcCcc
Q 044098 175 M-KNGVLKIVVPKVKED 190 (201)
Q Consensus 175 ~-~nGvL~I~lPK~~~~ 190 (201)
| +||+|+|++||..++
T Consensus 76 ~s~~GvL~I~~PK~~~~ 92 (106)
T 3l1e_A 76 LSADGMLTFSGPKIPSG 92 (106)
T ss_dssp ECTTSEEEEEEEBCCCC
T ss_pred ECCCCEEEEEEEccCcc
Confidence 9 899999999999765
No 7
>2wj5_A Heat shock protein beta-6; chaperone, disulfide bond, stress response; 1.12A {Rattus norvegicus}
Probab=99.89 E-value=4.7e-23 Score=151.53 Aligned_cols=97 Identities=15% Similarity=0.199 Sum_probs=80.4
Q ss_pred ceEEEEcCCeEEEEEEcCCCcccceEEEEECCEEEEEEeecCcCCCCCCCcccceeeeEEEEEEECCCCCCCCCceEEEE
Q 044098 96 GWLAKEDDNNLILKMDMPGLSKEDVRVSVQQNTQIIKGEGPQNESESGGGDDDQENGRRYSTRIDLPSNLYKFDDIKAGM 175 (201)
Q Consensus 96 ~~dv~E~~d~y~l~~dlPG~~~edI~V~v~~~~L~I~g~~~~~~~~~~~~~~~e~~~~~f~r~i~LP~~v~d~~~I~A~~ 175 (201)
.+||+|++++|+|.++|||++++||+|+++++.|+|+|++....+ ......+.|+|+|.||.+| |.++|+|.|
T Consensus 3 ~vdi~e~~~~~~v~~dlPG~~~edI~V~v~~~~L~I~g~~~~~~~------~~~~~~~eF~R~~~LP~~v-d~~~i~A~~ 75 (101)
T 2wj5_A 3 MAQVPTDPGYFSVLLDVKHFSPEEISVKVVGDHVEVHARHEERPD------EHGFIAREFHRRYRLPPGV-DPAAVTSAL 75 (101)
T ss_dssp CCCCCCCSSCEEEEEECTTSCGGGEEEEEETTEEEEEEEEEECSS------TTCCEEEEEEEEEECCTTB-CTTCCEEEE
T ss_pred cEEEEEeCCEEEEEEECCCCcHHHeEEEEECCEEEEEEEEecccC------CCCEEEEEEEEEEECCCCc-ChhHCEEEE
Confidence 479999999999999999999999999999999999999875422 1223445699999999999 999999999
Q ss_pred -ECCEEEEEEeCcCcccCCCeeEeec
Q 044098 176 -KNGVLKIVVPKVKEDEAKNVFKVNV 200 (201)
Q Consensus 176 -~nGvL~I~lPK~~~~~~~~~i~I~I 200 (201)
+||+|+|++||..+. +++.+.|..
T Consensus 76 s~nGvL~I~lPK~~~~-~~~~~~i~~ 100 (101)
T 2wj5_A 76 SPEGVLSIQATPASAQ-ASLPSPPAA 100 (101)
T ss_dssp CTTSEEEEEECBCCCC-CSSCC----
T ss_pred CCCCEEEEEEECCCcC-CCCCCcccc
Confidence 899999999998654 566776653
No 8
>3q9p_A Heat shock protein beta-1; alpha-crystallin domain, chaperone, charcot-marie-tooth DISE neuronopathy, IG-like fold, stress response; 2.00A {Homo sapiens} PDB: 3q9q_A
Probab=99.89 E-value=9.9e-23 Score=145.37 Aligned_cols=83 Identities=14% Similarity=0.332 Sum_probs=71.0
Q ss_pred EEEcCCeEEEEEEcCCCcccceEEEEECCEEEEEEeecCcCCCCCCCcccceeeeEEEEEEECCCCCCCCCceEEEEE-C
Q 044098 99 AKEDDNNLILKMDMPGLSKEDVRVSVQQNTQIIKGEGPQNESESGGGDDDQENGRRYSTRIDLPSNLYKFDDIKAGMK-N 177 (201)
Q Consensus 99 v~E~~d~y~l~~dlPG~~~edI~V~v~~~~L~I~g~~~~~~~~~~~~~~~e~~~~~f~r~i~LP~~v~d~~~I~A~~~-n 177 (201)
+.|++++|+|.++|||++++||+|+++++.|+|+|++....++ .+..+++|.|+|.||.+| |.++|+|.|+ |
T Consensus 2 ~~E~~~~~~v~~dlPG~~~edi~V~v~~~~L~I~g~~~~~~~~------~~~~~~~F~R~~~LP~~v-d~~~i~A~~~~~ 74 (85)
T 3q9p_A 2 GSHTADRWRVSLDVNHFAPDELTVKTKDGVVEITGKHAARQDE------HGYISRCFTRKYTLPPGV-DPTQVSSSLSPE 74 (85)
T ss_dssp -CCCCCEEEEEEECTTTCCSEEEEEEETTEEEEEEEEC-------------CCCEEEEEEEECCTTC-CGGGCEEEECTT
T ss_pred ccCcCCEEEEEEECCCCChHHEEEEEECCEEEEEEEEccccCC------CCEEEEEEEEEEECCCCc-ChHHcEEEECCC
Confidence 4589999999999999999999999999999999998765321 234578999999999999 9999999998 9
Q ss_pred CEEEEEEeCcC
Q 044098 178 GVLKIVVPKVK 188 (201)
Q Consensus 178 GvL~I~lPK~~ 188 (201)
|||+|++||.+
T Consensus 75 GvL~I~lPK~k 85 (85)
T 3q9p_A 75 GTLTVEAPMPK 85 (85)
T ss_dssp SEEEEEEECCC
T ss_pred CEEEEEEEcCC
Confidence 99999999964
No 9
>2klr_A Alpha-crystallin B chain; protein, dimer, oligomer, heterogeneity, intermolecular INTE chaperone, SHSP, human, small heat-shock protein, cataract; NMR {Homo sapiens} PDB: 2ygd_A
Probab=99.88 E-value=7.8e-23 Score=164.29 Aligned_cols=98 Identities=13% Similarity=0.287 Sum_probs=72.8
Q ss_pred ceEEEEcCCeEEEEEEcCCCcccceEEEEECCEEEEEEeecCcCCCCCCCcccceeeeEEEEEEECCCCCCCCCceEEEE
Q 044098 96 GWLAKEDDNNLILKMDMPGLSKEDVRVSVQQNTQIIKGEGPQNESESGGGDDDQENGRRYSTRIDLPSNLYKFDDIKAGM 175 (201)
Q Consensus 96 ~~dv~E~~d~y~l~~dlPG~~~edI~V~v~~~~L~I~g~~~~~~~~~~~~~~~e~~~~~f~r~i~LP~~v~d~~~I~A~~ 175 (201)
.+||+|++++|+|.++|||++++||+|++++|.|+|+|+++...+ ..+...+.|+|+|.||.+| |.++|+|.|
T Consensus 65 ~~dv~e~~d~~~v~~dlPG~~~edI~V~v~~~~L~I~g~~~~~~~------~~~~~~reF~R~~~LP~~V-d~~~i~A~~ 137 (175)
T 2klr_A 65 LSEMRLEKDRFSVNLDVKHFSPEELKVKVLGDVIEVHGKHEERQD------EHGFISREFHRKYRIPADV-DPLTITSSL 137 (175)
T ss_dssp ----CCCCSEEEEEECCSSCCGGGEEEEEETTEEEEEEEEEEEEE------TTEEEEEEEEEEEECTTTC-CTTTCEEEE
T ss_pred ceEEEEcCCeEEEEEECCCCChHHEEEEEECCEEEEEEEEccccc------CCceEEEEEEEEEECCCCc-ChhHeEEEE
Confidence 369999999999999999999999999999999999999865421 1234556799999999999 999999999
Q ss_pred -ECCEEEEEEeCcCcccCCCeeEeec
Q 044098 176 -KNGVLKIVVPKVKEDEAKNVFKVNV 200 (201)
Q Consensus 176 -~nGvL~I~lPK~~~~~~~~~i~I~I 200 (201)
+||||+|++||..+.+..+.|.|+.
T Consensus 138 s~dGvL~I~lPK~~~~~~~r~I~I~~ 163 (175)
T 2klr_A 138 SSDGVLTVNGPRKQVSGPERTIPITR 163 (175)
T ss_dssp CTTSCEEEEEECC-------------
T ss_pred cCCCEEEEEEECCCCCCCCeEEEEec
Confidence 7999999999986544345666643
No 10
>2bol_A TSP36, small heat shock protein; A-crystallin, molecular chaperone; 2.5A {Taenia saginata}
Probab=99.86 E-value=2e-22 Score=175.08 Aligned_cols=97 Identities=15% Similarity=0.230 Sum_probs=85.2
Q ss_pred CCcceEEEEcCC----eEEEEEEcCCCcccceEEEEECCEEEEEEeecCcCCCCCCCcccceeeeEEEEEEECCCCCCCC
Q 044098 93 SRRGWLAKEDDN----NLILKMDMPGLSKEDVRVSVQQNTQIIKGEGPQNESESGGGDDDQENGRRYSTRIDLPSNLYKF 168 (201)
Q Consensus 93 ~~p~~dv~E~~d----~y~l~~dlPG~~~edI~V~v~~~~L~I~g~~~~~~~~~~~~~~~e~~~~~f~r~i~LP~~v~d~ 168 (201)
+.|.+|++|+++ +|+|.++|||++++||+|++++|.|+|+|+++.+.+ .++.++.|+|+|.||.+| |.
T Consensus 97 ~~p~vDi~E~~~dgk~~~~v~~dlPG~~~edI~V~v~~~~L~I~ge~~~~~e-------~~r~~g~F~R~~~LP~~V-d~ 168 (314)
T 2bol_A 97 LDFLKDAYEVGKDGRLHFKVYFNVKNFKAEEITIKADKNKLVVRAQKSVACG-------DAAMSESVGRSIPLPPSV-DR 168 (314)
T ss_dssp TGGGGGCEEECTTSSEEEEEEEECTTCCTTTEEEEEETTEEEEEECCBSSTT-------CCCBCCCEEEEEECCTTB-CG
T ss_pred CCCccceEEcCCCCceEEEEEEECCCCchHHeEEEEECCEEEEEEEEeccCC-------CCEEEEEEEEEEECCCCc-cc
Confidence 678999999999 999999999999999999999999999999875421 237889999999999999 99
Q ss_pred CceEEEEE-CCEEEEEEeCcCcccCCCeeEee
Q 044098 169 DDIKAGMK-NGVLKIVVPKVKEDEAKNVFKVN 199 (201)
Q Consensus 169 ~~I~A~~~-nGvL~I~lPK~~~~~~~~~i~I~ 199 (201)
++|+|.|+ ||||+|++||..+.. +.|.|+
T Consensus 169 e~i~A~~~~nGVL~I~lPK~~~~~--~~I~it 198 (314)
T 2bol_A 169 NHIQATITTDDVLVIEAPVNEPNY--KAIKLS 198 (314)
T ss_dssp GGCEEEECSSSEEEEEEEBSSCCT--TTEEEE
T ss_pred cccEEEEeCCCEEEEEEeccCccc--ceeecc
Confidence 99999999 999999999986543 345543
No 11
>2y1y_A Alpha-crystallin B chain,; small heat shock protein, chaperone, stress protein, eye LEN protein, cataract; HET: MSE; 2.00A {Homo sapiens} PDB: 2y22_A 2wj7_A 3l1g_A 2y1z_A
Probab=99.85 E-value=3.9e-21 Score=138.35 Aligned_cols=84 Identities=17% Similarity=0.364 Sum_probs=68.4
Q ss_pred EEcCCeEEEEEEcCCCcccceEEEEECCEEEEEEeecCcCCCCCCCcccceeeeEEEEEEECCCCCCCCCceEEEE-ECC
Q 044098 100 KEDDNNLILKMDMPGLSKEDVRVSVQQNTQIIKGEGPQNESESGGGDDDQENGRRYSTRIDLPSNLYKFDDIKAGM-KNG 178 (201)
Q Consensus 100 ~E~~d~y~l~~dlPG~~~edI~V~v~~~~L~I~g~~~~~~~~~~~~~~~e~~~~~f~r~i~LP~~v~d~~~I~A~~-~nG 178 (201)
.+++++|+|.++|||++++||+|+++++.|+|+|++....+ ......+.|+|+|.||.+| |.++|+|.| +||
T Consensus 2 k~~~~~~~v~~dlPG~~~edi~V~v~~~~L~I~g~~~~~~~------~~~~~~~ef~R~~~LP~~v-d~~~i~A~~~~~G 74 (90)
T 2y1y_A 2 AMEKDRFSVNLDVKHFSPEELKVKVLGDVIEVHGKHEERQD------EHGFISREFHRKYRIPADV-DPLTITSSMSSDG 74 (90)
T ss_dssp ----CCEEEEEECTTSCGGGEEEEEETTEEEEEEEEEEEEC------SSSEEEEEEEEEEECCTTB-CGGGCEEEECTTS
T ss_pred CcCCCEEEEEEECCCCcHHHeEEEEECCEEEEEEEEecccC------CCCEEEEEEEEEEECCCCc-ChhHcEEEECCCC
Confidence 46889999999999999999999999999999999865421 1223456799999999999 999999999 899
Q ss_pred EEEEEEeCcCcc
Q 044098 179 VLKIVVPKVKED 190 (201)
Q Consensus 179 vL~I~lPK~~~~ 190 (201)
+|+|++||...+
T Consensus 75 vL~I~~pK~~~~ 86 (90)
T 2y1y_A 75 VLTVNGPRKQVS 86 (90)
T ss_dssp EEEEEECBC---
T ss_pred EEEEEEEcCCCC
Confidence 999999998654
No 12
>2bol_A TSP36, small heat shock protein; A-crystallin, molecular chaperone; 2.5A {Taenia saginata}
Probab=99.78 E-value=7e-19 Score=152.81 Aligned_cols=91 Identities=16% Similarity=0.334 Sum_probs=72.8
Q ss_pred CcceEEEEcC---CeEEEEEEc-CCCcccceEEEEECCEEEEEEeecCcCCCCCCCcccceeeeEEEEEEECCCCCCCCC
Q 044098 94 RRGWLAKEDD---NNLILKMDM-PGLSKEDVRVSVQQNTQIIKGEGPQNESESGGGDDDQENGRRYSTRIDLPSNLYKFD 169 (201)
Q Consensus 94 ~p~~dv~E~~---d~y~l~~dl-PG~~~edI~V~v~~~~L~I~g~~~~~~~~~~~~~~~e~~~~~f~r~i~LP~~v~d~~ 169 (201)
..+++|.+++ +.|+|.++| ||++++||+|++++|.|+|+|+++.+.+ .....|+.+|.|+|+|.||.+| |.+
T Consensus 220 ~~~~~i~e~~~~~~~~~v~~~ldPG~~~edi~V~v~~~~LtI~ge~~~~~~---~~~~~Er~~g~F~R~~~LP~~v-d~~ 295 (314)
T 2bol_A 220 KEGLEIVTAEDGSKKIHLELKVDPHFAPKDVKVWAKGNKVYVHGVTGKEEK---TENASHSEHREFYKAFVTPEVV-DAS 295 (314)
T ss_dssp CCEEEEEECTTSCEEEEEEEECCTTCCGGGEEEEESSSEEEEEEEEC---------------CEEEEEEEECSSEE-CGG
T ss_pred CCCCcEEEecCCCcEEEEEEEcCCCCChHHeEEEEECCEEEEEEEEeccCC---ceEEEEEeeeEEEEEEECCCCc-ChH
Confidence 3557877765 489999999 9999999999999999999999876532 2234689999999999999999 999
Q ss_pred ceEEEEECCEEEEEEeCcC
Q 044098 170 DIKAGMKNGVLKIVVPKVK 188 (201)
Q Consensus 170 ~I~A~~~nGvL~I~lPK~~ 188 (201)
+|+|+|+||||+|++||.+
T Consensus 296 ~i~A~~~dGvL~i~~Pk~~ 314 (314)
T 2bol_A 296 KTQAEIVDGLMVVEAPLFK 314 (314)
T ss_dssp GCEEEEETTEEEEEEEEEC
T ss_pred HeEEEEeCCEEEEEEecCC
Confidence 9999999999999999974
No 13
>1rl1_A Suppressor of G2 allele of SKP1 homolog; beta sandwich, 7 beta strands, similar to P23, lacking LAST beta strand SEEN in P23, protein degradation; NMR {Homo sapiens} SCOP: b.15.1.3
Probab=99.02 E-value=1.6e-09 Score=80.14 Aligned_cols=82 Identities=13% Similarity=0.219 Sum_probs=73.3
Q ss_pred CCcceEEEEcCCeEEEEEEcCCCcccceEEEEECCEEEEEEeecCcCCCCCCCcccceeeeEEEEEEECCCCCCCCCceE
Q 044098 93 SRRGWLAKEDDNNLILKMDMPGLSKEDVRVSVQQNTQIIKGEGPQNESESGGGDDDQENGRRYSTRIDLPSNLYKFDDIK 172 (201)
Q Consensus 93 ~~p~~dv~E~~d~y~l~~dlPG~~~edI~V~v~~~~L~I~g~~~~~~~~~~~~~~~e~~~~~f~r~i~LP~~v~d~~~I~ 172 (201)
..+.++++++++.+.|.+.+||+.+++++|.+.++.|.|++.... ...|...+.|+..| +++..+
T Consensus 8 ~~~~~~W~Qt~~~V~v~i~l~~v~~~~v~v~~~~~~l~v~~~~~~--------------~~~y~~~~~L~~~I-~~e~s~ 72 (114)
T 1rl1_A 8 SKIKYDWYQTESQVVITLMIKNVQKNDVNVEFSEKELSALVKLPS--------------GEDYNLKLELLHPI-IPEQST 72 (114)
T ss_dssp CCCCEEEEECSSEEEEEECCCSCCGGGEEEECSSSCEEEEEECTT--------------SSEEEEEECBSSCC-CGGGEE
T ss_pred CCCCccEEeCCCEEEEEEEeCCCCHHHCEEEEEcCEEEEEEEeCC--------------CcEEEEEeeCCCcC-CccccE
Confidence 356799999999999999999999999999999999999986421 23688999999999 999999
Q ss_pred EEEECCEEEEEEeCcCc
Q 044098 173 AGMKNGVLKIVVPKVKE 189 (201)
Q Consensus 173 A~~~nGvL~I~lPK~~~ 189 (201)
+.+.+|.|.|+|+|..+
T Consensus 73 ~~~~~~~l~i~L~K~~~ 89 (114)
T 1rl1_A 73 FKVLSTKIEIKLKKPEA 89 (114)
T ss_dssp EEECSSSEEEEEECSSC
T ss_pred EEEECCEEEEEEEcCCC
Confidence 99999999999999864
No 14
>2xcm_C SGT1-like protein, cytosolic heat shock protein 90; chaperone-protein binding complex, stress response; HET: ADP; 2.20A {Arabidopsis thaliana} PDB: 2jki_S*
Probab=99.01 E-value=1.4e-09 Score=77.24 Aligned_cols=81 Identities=14% Similarity=0.151 Sum_probs=72.4
Q ss_pred CcceEEEEcCCeEEEEEEcCCCcccceEEEEECCEEEEEEeecCcCCCCCCCcccceeeeEEEEEEECCCCCCCCCceEE
Q 044098 94 RRGWLAKEDDNNLILKMDMPGLSKEDVRVSVQQNTQIIKGEGPQNESESGGGDDDQENGRRYSTRIDLPSNLYKFDDIKA 173 (201)
Q Consensus 94 ~p~~dv~E~~d~y~l~~dlPG~~~edI~V~v~~~~L~I~g~~~~~~~~~~~~~~~e~~~~~f~r~i~LP~~v~d~~~I~A 173 (201)
.+.++++++++.+.|.+.+||+.+++++|.++++.|.|++.... ...|...+.|+..| +++..++
T Consensus 2 ~~~~~W~Qt~~~V~v~i~~~~v~~~~v~v~~~~~~l~v~~~~~~--------------~~~y~~~~~L~~~I-~~~~s~~ 66 (92)
T 2xcm_C 2 KYRHEYYQKPEEVVVTVFAKGIPKQNVNIDFGEQILSVVIEVPG--------------EDAYYLQPRLFGKI-IPDKCKY 66 (92)
T ss_dssp CSEEEEEEETTEEEEEEECCSCCGGGEEEEECSSBEEEEECCTT--------------SCCEEECCBBSSCB-CGGGCEE
T ss_pred CccccEEeCCCEEEEEEEECCCChHHeEEEEECCEEEEEEEcCC--------------CcEEEEeeEcCCcc-CchhEEE
Confidence 46799999999999999999999999999999999999876421 13688889999999 9999999
Q ss_pred EEECCEEEEEEeCcCc
Q 044098 174 GMKNGVLKIVVPKVKE 189 (201)
Q Consensus 174 ~~~nGvL~I~lPK~~~ 189 (201)
.+.+|.|.|+|+|..+
T Consensus 67 ~~~~~~l~i~L~K~~~ 82 (92)
T 2xcm_C 67 EVLSTKIEICLAKADI 82 (92)
T ss_dssp EECSSCEEEEEEBSSS
T ss_pred EEECCEEEEEEEcCCC
Confidence 9999999999999854
No 15
>3eud_A Protein SHQ1; CS domain HSP20-like domain SHQ1 H/ACA snoRNP ribosome biogenesis, nucleus, nuclear protein; HET: MSE; 2.40A {Saccharomyces cerevisiae}
Probab=98.27 E-value=1.1e-05 Score=59.83 Aligned_cols=80 Identities=18% Similarity=0.316 Sum_probs=70.6
Q ss_pred CCcceEEEEcCCeEEEEEEcCCCc--ccceEEEEECCEEEEEEeecCcCCCCCCCcccceeeeEEEEEEECCCCCCCCCc
Q 044098 93 SRRGWLAKEDDNNLILKMDMPGLS--KEDVRVSVQQNTQIIKGEGPQNESESGGGDDDQENGRRYSTRIDLPSNLYKFDD 170 (201)
Q Consensus 93 ~~p~~dv~E~~d~y~l~~dlPG~~--~edI~V~v~~~~L~I~g~~~~~~~~~~~~~~~e~~~~~f~r~i~LP~~v~d~~~ 170 (201)
..|.+.+.++++.++|.+.+|.+. ..++++.++++.+.... ..|.-++.||..|.+.+.
T Consensus 16 iTP~F~itQDdefv~I~I~~p~ir~~a~~~ei~vd~~~F~F~~-------------------~PYyLRL~lP~~vved~~ 76 (115)
T 3eud_A 16 ITPRFSITQDEEFIFLKIFISNIRFSAVGLEIIIQENMIIFHL-------------------SPYYLRLRFPHELIDDER 76 (115)
T ss_dssp BCCCEEEEECSSEEEEEEECCSCCCCSSSCEEEEETTEEEEEE-------------------TTEEEEEECSSCEECSTT
T ss_pred eCCcEEEEECCCEEEEEEEcCceecccCccEEEEeCCEEEEec-------------------CCeEEEEecCcceecCCC
Confidence 578999999999999999999876 78999999999999963 357788999999988888
Q ss_pred eEEEEE--CCEEEEEEeCcCccc
Q 044098 171 IKAGMK--NGVLKIVVPKVKEDE 191 (201)
Q Consensus 171 I~A~~~--nGvL~I~lPK~~~~~ 191 (201)
-+|+|+ +|.++|++||..+-+
T Consensus 77 ~~A~YD~d~g~~~v~lpK~~~GE 99 (115)
T 3eud_A 77 STAQYDSKDECINVKVAKLNKNE 99 (115)
T ss_dssp CEEEEETTTTEEEEEEEESSTTC
T ss_pred cceEEeCCCcEEEEEEcCCcCCC
Confidence 999996 899999999986543
No 16
>2k8q_A Protein SHQ1; beta-sandwich, CS domain, nucleus, structural protein; NMR {Saccharomyces cerevisiae}
Probab=98.15 E-value=4e-06 Score=63.96 Aligned_cols=79 Identities=16% Similarity=0.305 Sum_probs=69.3
Q ss_pred CCcceEEEEcCCeEEEEEEcCCCc--ccceEEEEECCEEEEEEeecCcCCCCCCCcccceeeeEEEEEEECCCCCCCCCc
Q 044098 93 SRRGWLAKEDDNNLILKMDMPGLS--KEDVRVSVQQNTQIIKGEGPQNESESGGGDDDQENGRRYSTRIDLPSNLYKFDD 170 (201)
Q Consensus 93 ~~p~~dv~E~~d~y~l~~dlPG~~--~edI~V~v~~~~L~I~g~~~~~~~~~~~~~~~e~~~~~f~r~i~LP~~v~d~~~ 170 (201)
..|.+.+.++++.++|.+.+|... ..++++.+++..+.... ..|.-++.||..|.+.+.
T Consensus 2 iTP~F~itQd~e~viV~Ik~P~~~~~~sdiei~v~~~~F~F~~-------------------~PYyLRL~LP~~V~e~~~ 62 (134)
T 2k8q_A 2 ITPRFSITQDEEFIFLKIFISNIRFSAVGLEIIIQENMIIFHL-------------------SPYYLRLRFPHELIDDER 62 (134)
T ss_dssp CCSEEEEEECSSEEEEEEECCSSCCCSSSCCCEECSSSEEECS-------------------SSSCEEECCSSCEECCSS
T ss_pred cCceEEEEECCCEEEEEEEcCccccCccccEEEEeCCEEEEec-------------------CCeEEEecCCCeeecCCC
Confidence 368899999999999999999999 89999999999998842 356678999999878888
Q ss_pred eEEEEE--CCEEEEEEeCcCcc
Q 044098 171 IKAGMK--NGVLKIVVPKVKED 190 (201)
Q Consensus 171 I~A~~~--nGvL~I~lPK~~~~ 190 (201)
-+|+|. .|.|+|+|||...-
T Consensus 63 ~kA~YD~d~~~~~VtLpK~~~G 84 (134)
T 2k8q_A 63 STAQYDSKDECINVKVAKLNKN 84 (134)
T ss_dssp CEEEEETTTTEEEEEEEESSTT
T ss_pred cceeEeccCCEEEEEEeCCCCC
Confidence 999996 89999999998654
No 17
>3igf_A ALL4481 protein; two-domained protein consisting of the N-terminal alpha-beta the C-terminal all beta domain., structural genomics; 2.00A {Nostoc SP}
Probab=98.13 E-value=9.2e-06 Score=71.79 Aligned_cols=73 Identities=18% Similarity=0.186 Sum_probs=62.8
Q ss_pred CcceEEEEcCCeEEEEEEcCCCcccceEEEEECCEEEEEEeecCcCCCCCCCcccceeeeEEEEEEECCCCCCCCCceEE
Q 044098 94 RRGWLAKEDDNNLILKMDMPGLSKEDVRVSVQQNTQIIKGEGPQNESESGGGDDDQENGRRYSTRIDLPSNLYKFDDIKA 173 (201)
Q Consensus 94 ~p~~dv~E~~d~y~l~~dlPG~~~edI~V~v~~~~L~I~g~~~~~~~~~~~~~~~e~~~~~f~r~i~LP~~v~d~~~I~A 173 (201)
..++.+.+. .|.+++.|||+++++|++...++.|+|+ .+.|.|.|.||..+....-..|
T Consensus 297 ~~~~~i~~~--~~~~~l~lP~~~~~~~~l~~~gdeL~v~-------------------~g~~rR~i~LP~~L~~~~v~~A 355 (374)
T 3igf_A 297 PKPITIDTH--NRQVRLFLPGFDKKQVKLTQYGPEVTVE-------------------AGDQRRNIFLPPALSGRPITGA 355 (374)
T ss_dssp CCSEEEETT--TTEEEEECTTCCGGGCEEEEETTEEEEE-------------------ETTEEEEEECCTTTTTCCEEEE
T ss_pred CCCEEEEec--cEEEEEECCCCCHHHeEEEEECCeEEEE-------------------ECCEeecccCCHHHcCCCcccc
Confidence 345665444 8999999999999999999999999995 5689999999999866677889
Q ss_pred EEECCEEEEEEeCc
Q 044098 174 GMKNGVLKIVVPKV 187 (201)
Q Consensus 174 ~~~nGvL~I~lPK~ 187 (201)
+|+||.|+|++-..
T Consensus 356 ~~~~~~L~i~~~~~ 369 (374)
T 3igf_A 356 KFQNNYLIISFLEH 369 (374)
T ss_dssp EEETTEEEEEECCC
T ss_pred EEECCEEEEEEehh
Confidence 99999999998654
No 18
>1x5m_A Calcyclin-binding protein; CS domain, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.90 E-value=0.0002 Score=53.67 Aligned_cols=82 Identities=16% Similarity=0.257 Sum_probs=69.6
Q ss_pred CcceEEEEcCCeEEEEEEcCCC---cccceEEEEECCEEEEEEeecCcCCCCCCCcccceeeeEEEEEEE-CCCCCCCCC
Q 044098 94 RRGWLAKEDDNNLILKMDMPGL---SKEDVRVSVQQNTQIIKGEGPQNESESGGGDDDQENGRRYSTRID-LPSNLYKFD 169 (201)
Q Consensus 94 ~p~~dv~E~~d~y~l~~dlPG~---~~edI~V~v~~~~L~I~g~~~~~~~~~~~~~~~e~~~~~f~r~i~-LP~~v~d~~ 169 (201)
.+.++++++.+.+.|.+.+||+ .++++.|.+..+.|.|.+.... ...|.-.+. |-..| +++
T Consensus 20 ~~~y~W~Qt~~~V~i~I~l~~~~~~~~~~v~V~~~~~~l~v~~~~~~--------------~~~y~~~~~~L~~~I-~~e 84 (127)
T 1x5m_A 20 ISNYGWDQSDKFVKIYITLTGVHQVPTENVQVHFTERSFDLLVKNLN--------------GKSYSMIVNNLLKPI-SVE 84 (127)
T ss_dssp CCSCEEEEETTEEEEEEECTTTTTSCTTSEEEEECSSEEEEEECSCS--------------SSCEEEEEECBSSCC-CTT
T ss_pred ccEEEEEcCCCEEEEEEEeCCCCcCCccccEEEEEcCEEEEEEEcCC--------------CCcEEEEhHHhcCcc-Ccc
Confidence 3468999999999999999999 8999999999999999874211 125777885 99999 999
Q ss_pred ceEEEEECCEEEEEEeCcCcc
Q 044098 170 DIKAGMKNGVLKIVVPKVKED 190 (201)
Q Consensus 170 ~I~A~~~nGvL~I~lPK~~~~ 190 (201)
+-+.....+.+.|+|-|..+.
T Consensus 85 ~S~~~v~~~kVei~L~K~~~~ 105 (127)
T 1x5m_A 85 GSSKKVKTDTVLILCRKKVEN 105 (127)
T ss_dssp TCEEEEETTEEEEEEECSSSS
T ss_pred cCEEEEeCCEEEEEEEECCCC
Confidence 999999999999999998643
No 19
>1wgv_A KIAA1068 protein; CS domain, HSP20-like fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.15.1.4
Probab=97.74 E-value=0.00068 Score=50.53 Aligned_cols=82 Identities=16% Similarity=0.236 Sum_probs=68.1
Q ss_pred CCcceEEEEcCCeEEEEEEcC-CC-cccceEEEEECCEEEEEEeecCcCCCCCCCcccceeeeEEEEEEECCCCCCCCCc
Q 044098 93 SRRGWLAKEDDNNLILKMDMP-GL-SKEDVRVSVQQNTQIIKGEGPQNESESGGGDDDQENGRRYSTRIDLPSNLYKFDD 170 (201)
Q Consensus 93 ~~p~~dv~E~~d~y~l~~dlP-G~-~~edI~V~v~~~~L~I~g~~~~~~~~~~~~~~~e~~~~~f~r~i~LP~~v~d~~~ 170 (201)
..+.+.+.++.+.+.|.+.|| |+ +.++|+|.+..+.|.|...... ...+.-...|...| +++.
T Consensus 18 ~~~~y~W~Qt~~~V~i~I~lp~~~~~~kdv~V~i~~~~l~v~~~~~~--------------~~~~~~~~~L~~~I-~~e~ 82 (124)
T 1wgv_A 18 VRENYTWSQDYTDLEVRVPVPKHVVKGKQVSVALSSSSIRVAMLEEN--------------GERVLMEGKLTHKI-NTES 82 (124)
T ss_dssp CCSSCEEEEETTEEEEEEECCTTCCSGGGEEEEECSSEEEEEEECSS--------------SEEEEEEEEBSSCB-CTTT
T ss_pred cCCcEEEEEcccEEEEEEEcCCCCCchhheEEEEEcCEEEEEEEccC--------------CCceEEcccccCcC-CCcC
Confidence 467899999999999999999 87 8999999999999999865311 11233556899999 9999
Q ss_pred eEEEEECCE-EEEEEeCcCc
Q 044098 171 IKAGMKNGV-LKIVVPKVKE 189 (201)
Q Consensus 171 I~A~~~nGv-L~I~lPK~~~ 189 (201)
-+..+++|- |.|+|-|...
T Consensus 83 S~w~i~~~k~v~i~L~K~~~ 102 (124)
T 1wgv_A 83 SLWSLEPGKCVLVNLSKVGE 102 (124)
T ss_dssp CEEEECTTSEEEEEECBSSS
T ss_pred CEEEEeCCCEEEEEEEECCC
Confidence 999999874 9999999854
No 20
>1ejf_A Progesterone receptor P23; chaperone, CO-chaperone, beta-sandwich; 2.49A {Homo sapiens} SCOP: b.15.1.2
Probab=97.72 E-value=0.00025 Score=53.04 Aligned_cols=78 Identities=13% Similarity=0.112 Sum_probs=67.2
Q ss_pred ceEEEEcCCeEEEEEEcCCCcccceEEEEECCEEEEEEeecCcCCCCCCCcccceeeeEEEEEEECCCCCCCCCceEEEE
Q 044098 96 GWLAKEDDNNLILKMDMPGLSKEDVRVSVQQNTQIIKGEGPQNESESGGGDDDQENGRRYSTRIDLPSNLYKFDDIKAGM 175 (201)
Q Consensus 96 ~~dv~E~~d~y~l~~dlPG~~~edI~V~v~~~~L~I~g~~~~~~~~~~~~~~~e~~~~~f~r~i~LP~~v~d~~~I~A~~ 175 (201)
.++++++.+.+.|++.+|+. ++++|.++.+.|.+++..... ...|.-.+.|-..| +++.-+...
T Consensus 5 ~~~W~Qt~~~V~ltI~~~~~--~~~~V~~~~~~l~~~~~~~~~-------------~~~y~~~l~L~~~I-~~e~S~~~v 68 (125)
T 1ejf_A 5 SAKWYDRRDYVFIEFCVEDS--KDVNVNFEKSKLTFSCLGGSD-------------NFKHLNEIDLFHCI-DPNDSKHKR 68 (125)
T ss_dssp CEEEEECSSEEEEEECCTTE--EEEEEEEETTEEEEEEEETTT-------------TEEEEEEEEBSSCE-EEEEEEEEE
T ss_pred ceeEEeCCCEEEEEEEecCC--CceEEEEECCEEEEEEEeCCC-------------CceEEEEEEcccee-ccccCEEEE
Confidence 79999999999999999995 799999999999998764211 23588888999999 999999999
Q ss_pred ECCEEEEEEeCcCc
Q 044098 176 KNGVLKIVVPKVKE 189 (201)
Q Consensus 176 ~nGvL~I~lPK~~~ 189 (201)
.++-+.|+|.|..+
T Consensus 69 ~~~kiei~L~K~~~ 82 (125)
T 1ejf_A 69 TDRSILCCLRKGES 82 (125)
T ss_dssp CSSCEEEEEEESST
T ss_pred CCCEEEEEEEECCC
Confidence 88899999999853
No 21
>1wh0_A Ubiquitin carboxyl-terminal hydrolase 19; USP, CS domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.15.1.3
Probab=97.66 E-value=0.00027 Score=53.75 Aligned_cols=92 Identities=7% Similarity=0.033 Sum_probs=70.7
Q ss_pred CcceEEEEc-CCeEEEEEEcCCCcccceEEEEECCEEEEEEeecCcCCCCCCCccccee-eeEEEEEEECCCCCCCCCce
Q 044098 94 RRGWLAKED-DNNLILKMDMPGLSKEDVRVSVQQNTQIIKGEGPQNESESGGGDDDQEN-GRRYSTRIDLPSNLYKFDDI 171 (201)
Q Consensus 94 ~p~~dv~E~-~d~y~l~~dlPG~~~edI~V~v~~~~L~I~g~~~~~~~~~~~~~~~e~~-~~~f~r~i~LP~~v~d~~~I 171 (201)
.+.++++++ .+.+.|.+.++++.+++++|.+..+.|.|+........ -..+-... ...|.-.+.|-..| ++++-
T Consensus 19 ~~r~~W~Qt~~~~V~vtI~~k~v~~~~v~V~f~~~~l~v~~~~~~~~~---l~~~~a~g~~~~y~~~~~L~~~I-~pe~S 94 (134)
T 1wh0_A 19 FVKNDSYEKGPDSVVVHVYVKEICRDTSRVLFREQDFTLIFQTRDGNF---LRLHPGCGPHTTFRWQVKLRNLI-EPEQC 94 (134)
T ss_dssp CCCEEEEEETTTEEEEEEECCSBCTTSCEEEECSSEEEEEECBCCHHH---HHHSTTCCTTSCEEEEEEBSSCE-EEEEE
T ss_pred CCCeEEEcCCCCEEEEEEEeCCCCcccCEEEEECCEEEEEEEcCCCcc---cccccccCcceeEEEeccccccC-CchhC
Confidence 567899999 99999999999999999999999999999875321100 00000000 12677788899999 99998
Q ss_pred EEEEECCEEEEEEeCcCc
Q 044098 172 KAGMKNGVLKIVVPKVKE 189 (201)
Q Consensus 172 ~A~~~nGvL~I~lPK~~~ 189 (201)
+..+..+-+.|+|.|...
T Consensus 95 ~~~v~~~kIeI~L~K~e~ 112 (134)
T 1wh0_A 95 TFCFTASRIDICLRKRQS 112 (134)
T ss_dssp EEEECSSEEEEEEEESSS
T ss_pred EEEEeCCEEEEEEEECCC
Confidence 888889999999999754
No 22
>3qor_A Nuclear migration protein NUDC; beta-sandwich, chaperone, protein cell cycle; HET: OCS; 1.75A {Homo sapiens} PDB: 3qor_B* 2cr0_A
Probab=97.66 E-value=0.0013 Score=48.85 Aligned_cols=79 Identities=15% Similarity=0.183 Sum_probs=65.9
Q ss_pred CCcceEEEEcCCeEEEEEEcC-C--CcccceEEEEECCEEEEEEeecCcCCCCCCCcccceeeeEEEEEEECCCCCCCCC
Q 044098 93 SRRGWLAKEDDNNLILKMDMP-G--LSKEDVRVSVQQNTQIIKGEGPQNESESGGGDDDQENGRRYSTRIDLPSNLYKFD 169 (201)
Q Consensus 93 ~~p~~dv~E~~d~y~l~~dlP-G--~~~edI~V~v~~~~L~I~g~~~~~~~~~~~~~~~e~~~~~f~r~i~LP~~v~d~~ 169 (201)
..+.+.+.++.+.+.|.+.+| | ++.+||.|.+..+.|.|..... .+.-...|...| +++
T Consensus 15 ~~~~y~W~Qt~~eV~v~V~lp~~~~~~~kdv~V~i~~~~l~v~~kg~-----------------~~~~~g~L~~~I-~~d 76 (121)
T 3qor_A 15 DLPNYRWTQTLSELDLAVPFCVNFRLKGKDMVVDIQRRHLRVGLKGQ-----------------PAIIDGELYNEV-KVE 76 (121)
T ss_dssp BCSSCEEEECSSEEEEEEECCCSSCCCGGGEEEEEETTEEEEEETTS-----------------CCSEEEEBSSCB-CGG
T ss_pred cCCCEEEEEccceEEEEEECCCCCcccccceEEEEEcCEEEEEEcCc-----------------ceEEeccccccc-ccc
Confidence 567899999999999999999 4 7999999999999999865321 011244789999 999
Q ss_pred ceEEEEECC-EEEEEEeCcCc
Q 044098 170 DIKAGMKNG-VLKIVVPKVKE 189 (201)
Q Consensus 170 ~I~A~~~nG-vL~I~lPK~~~ 189 (201)
.-...+++| .|.|+|-|...
T Consensus 77 eS~w~i~~~~~i~i~L~K~~~ 97 (121)
T 3qor_A 77 ESSWLIADGAVVTVHLEKINK 97 (121)
T ss_dssp GCEEEEETTTEEEEEEEBSSS
T ss_pred ccEEEEcCCCEEEEEEEECCC
Confidence 999999998 99999999854
No 23
>1wfi_A Nuclear distribution gene C homolog; NUDC, riken structural genomics/proteomics initiative, RSGI, structural genomics, transport protein; NMR {Mus musculus} SCOP: b.15.1.4
Probab=97.57 E-value=0.00093 Score=50.20 Aligned_cols=79 Identities=18% Similarity=0.219 Sum_probs=65.6
Q ss_pred CCcceEEEEcCCeEEEEEEcC-C--CcccceEEEEECCEEEEEEeecCcCCCCCCCcccceeeeEEEEEEECCCCCCCCC
Q 044098 93 SRRGWLAKEDDNNLILKMDMP-G--LSKEDVRVSVQQNTQIIKGEGPQNESESGGGDDDQENGRRYSTRIDLPSNLYKFD 169 (201)
Q Consensus 93 ~~p~~dv~E~~d~y~l~~dlP-G--~~~edI~V~v~~~~L~I~g~~~~~~~~~~~~~~~e~~~~~f~r~i~LP~~v~d~~ 169 (201)
..+.+.+.++.+.+.|.+.+| | +++++|.|.+..+.|.|...... +.-...|...| +++
T Consensus 6 ~~~~y~W~Qt~~~V~i~I~lp~~~~~~~kdv~V~i~~~~l~v~~kg~~-----------------~~~~~~L~~~I-~~e 67 (131)
T 1wfi_A 6 SGPNYRWTQTLAELDLAVPFRVSFRLKGKDVVVDIQRRHLRVGLKGQP-----------------PVVDGELYNEV-KVE 67 (131)
T ss_dssp SCCSSEEEECSSEEEEEECCCCSSCCCTTSEEEEEETTEEEEEETTSC-----------------CSBCSCBSSCB-CST
T ss_pred CCCcEEEEecCCEEEEEEECCCCCcccccceEEEEeCCEEEEEECCce-----------------EEEeccccccc-ccc
Confidence 467899999999999999999 6 89999999999999999864210 01123678889 999
Q ss_pred ceEEEEECC-EEEEEEeCcCc
Q 044098 170 DIKAGMKNG-VLKIVVPKVKE 189 (201)
Q Consensus 170 ~I~A~~~nG-vL~I~lPK~~~ 189 (201)
.-...+++| .|.|+|-|..+
T Consensus 68 ~s~w~i~~~k~v~i~L~K~~~ 88 (131)
T 1wfi_A 68 ESSWLIEDGKVVTVHLEKINK 88 (131)
T ss_dssp TCEEEEETTTEEEEEEEBSSS
T ss_pred cCEEEEcCCCEEEEEEEECCC
Confidence 999999998 89999999864
No 24
>2o30_A Nuclear movement protein; MCSG, structural genomics, PSI-2, structure initiative; 1.66A {Encephalitozoon cuniculi}
Probab=97.44 E-value=0.0011 Score=49.93 Aligned_cols=76 Identities=11% Similarity=0.196 Sum_probs=62.7
Q ss_pred CcceEEEEcCCeEEEEEEcC-CCcccceEEEEECCEEEEEEeecCcCCCCCCCcccceeeeEEEEEEECCCCCCCCCceE
Q 044098 94 RRGWLAKEDDNNLILKMDMP-GLSKEDVRVSVQQNTQIIKGEGPQNESESGGGDDDQENGRRYSTRIDLPSNLYKFDDIK 172 (201)
Q Consensus 94 ~p~~dv~E~~d~y~l~~dlP-G~~~edI~V~v~~~~L~I~g~~~~~~~~~~~~~~~e~~~~~f~r~i~LP~~v~d~~~I~ 172 (201)
.+.+.+.++.+.+.|.+.|| |+++++|.|.+..+.|.|.+.. . . .-...|...| +++.-.
T Consensus 4 ~~~y~W~Qt~~~V~i~I~lp~~~~~kdv~V~i~~~~l~v~~~g--------------~---~-~~~~~L~~~I-~~e~S~ 64 (131)
T 2o30_A 4 EAKYTWDQELNEINIQFPVTGDADSSAIKIRMVGKKICVKNQG--------------E---I-VIDGELLHEV-DVSSLW 64 (131)
T ss_dssp -CCCEEEEETTEEEEEEECC---CCSCEEEEEETTEEEEEETT--------------E---E-EEEEEBSSCE-EEEEEE
T ss_pred CCcEEEEecCCEEEEEEECCCCCCccceEEEEECCEEEEEECC--------------E---e-eEcccccccc-ccccCE
Confidence 57799999999999999996 8999999999999999997531 0 1 2345789999 999999
Q ss_pred EEEECCEEEEEEeCcC
Q 044098 173 AGMKNGVLKIVVPKVK 188 (201)
Q Consensus 173 A~~~nGvL~I~lPK~~ 188 (201)
..+++|-|.|+|-|..
T Consensus 65 w~i~~~kv~i~L~K~~ 80 (131)
T 2o30_A 65 WVINGDVVDVNVTKKR 80 (131)
T ss_dssp EEEETTEEEEEEEESS
T ss_pred EEEeCCEEEEEEEECC
Confidence 9999999999999984
No 25
>2rh0_A NUDC domain-containing protein 2; 13542905, nuclear movement protein, structural genomics, joint center for structural genomics, JCSG; 1.95A {Mus musculus}
Probab=97.39 E-value=0.0021 Score=50.00 Aligned_cols=78 Identities=14% Similarity=0.192 Sum_probs=66.0
Q ss_pred CCcceEEEEcCCeEEEEEEcC-CCcccceEEEEECCEEEEEEeecCcCCCCCCCcccceeeeEEEEEEECCCCCCCCCce
Q 044098 93 SRRGWLAKEDDNNLILKMDMP-GLSKEDVRVSVQQNTQIIKGEGPQNESESGGGDDDQENGRRYSTRIDLPSNLYKFDDI 171 (201)
Q Consensus 93 ~~p~~dv~E~~d~y~l~~dlP-G~~~edI~V~v~~~~L~I~g~~~~~~~~~~~~~~~e~~~~~f~r~i~LP~~v~d~~~I 171 (201)
..+.+.+.++.+.+.|.|.|| |++.++|.|.+..+.|.|..+. . .+ -...|...| +++.-
T Consensus 12 ~~~~y~W~Qt~~eV~v~I~lp~~~~~kdv~V~i~~~~L~v~~kg--------------~---~~-l~g~L~~~I-~~eeS 72 (157)
T 2rh0_A 12 GTPWGQWYQTLEEVFIEVQVPPGTRAQDIQCGLQSRHVALAVGG--------------R---EI-LKGKLFDST-IADEG 72 (157)
T ss_dssp ECSSEEEEECSSEEEEEEECCTTCCGGGEEEEECSSEEEEEETT--------------E---EE-EEEEBSSCB-CGGGC
T ss_pred CCCcEEEEecCCEEEEEEECCCCCcccceEEEEecCEEEEEECC--------------E---EE-Eeecccccc-Ccccc
Confidence 357799999999999999998 8999999999999999997531 0 12 446799999 99999
Q ss_pred EEEEECC-EEEEEEeCcCc
Q 044098 172 KAGMKNG-VLKIVVPKVKE 189 (201)
Q Consensus 172 ~A~~~nG-vL~I~lPK~~~ 189 (201)
+..+++| +|.|+|-|...
T Consensus 73 ~w~i~~~k~v~I~L~K~~~ 91 (157)
T 2rh0_A 73 TWTLEDRKMVRIVLTKTKR 91 (157)
T ss_dssp EEEEECCCEEEEEEEBSSC
T ss_pred EEEEcCCcEEEEEEEEcCC
Confidence 9999987 49999999864
No 26
>2kmw_A Uncharacterized protein AT3G03773; protein structure initiative, center for eukaryotic structural genomics, CESG, structural genomics; NMR {Arabidopsis thaliana}
Probab=97.26 E-value=0.0011 Score=51.29 Aligned_cols=78 Identities=13% Similarity=0.227 Sum_probs=65.8
Q ss_pred CcceEEEEcCCeEEEEEEcCCCcccceEEEEE-CCEEEEEEeecCcCCCCCCCcccceeeeEEEEEEECCCCCCCCCceE
Q 044098 94 RRGWLAKEDDNNLILKMDMPGLSKEDVRVSVQ-QNTQIIKGEGPQNESESGGGDDDQENGRRYSTRIDLPSNLYKFDDIK 172 (201)
Q Consensus 94 ~p~~dv~E~~d~y~l~~dlPG~~~edI~V~v~-~~~L~I~g~~~~~~~~~~~~~~~e~~~~~f~r~i~LP~~v~d~~~I~ 172 (201)
.|.++++++.+.++|.|.+|++ ++++|.++ .+.|.+++. ... ...|.-.+.|-..| +++ -+
T Consensus 4 ~P~~~W~Qt~~~V~ltI~l~~~--~~v~V~~~~~~~l~~~~~-~~~-------------~~~y~~~l~L~~~I-dpe-S~ 65 (150)
T 2kmw_A 4 NPEVLWAQRSDKVYLTVALPDA--KDISVKCEPQGLFSFSAL-GAQ-------------GERFEFSLELYGKI-MTE-YR 65 (150)
T ss_dssp CCCEEEEECSSEEEEEECCSSE--EEEEECCCTTEEEEEEEE-TTT-------------TEEEEEEEEBSSCE-EEE-EE
T ss_pred CCcEEEEeCCCEEEEEEEeCCC--CceEEEEecCCEEEEEEE-cCC-------------CceEEEEeEhhhcc-ccc-ce
Confidence 5789999999999999999997 57999999 789999986 111 24688888999999 999 88
Q ss_pred EEEECCEEEEEEeCcCc
Q 044098 173 AGMKNGVLKIVVPKVKE 189 (201)
Q Consensus 173 A~~~nGvL~I~lPK~~~ 189 (201)
......-+.|+|.|..+
T Consensus 66 ~~v~~~kIei~L~K~e~ 82 (150)
T 2kmw_A 66 KNVGLRNIIFSIQKEER 82 (150)
T ss_dssp EEEESSSEEEEEEECCS
T ss_pred EEecCCEEEEEEEECCC
Confidence 88888889999999764
No 27
>2cg9_X CO-chaperone protein SBA1; chaperone complex, HSP90, heat shock protein, ATP-binding, heat shock, nucleotide-binding, acetylation; HET: ATP; 3.1A {Saccharomyces cerevisiae}
Probab=97.12 E-value=0.00024 Score=53.90 Aligned_cols=84 Identities=12% Similarity=0.168 Sum_probs=61.5
Q ss_pred CcceEEEEcCCe-------EEEEEEcCCCcccceEEEEECCEEEEEEeecCcCCCCCCCcccceeeeEEEEEEECCCCCC
Q 044098 94 RRGWLAKEDDNN-------LILKMDMPGLSKEDVRVSVQQNTQIIKGEGPQNESESGGGDDDQENGRRYSTRIDLPSNLY 166 (201)
Q Consensus 94 ~p~~dv~E~~d~-------y~l~~dlPG~~~edI~V~v~~~~L~I~g~~~~~~~~~~~~~~~e~~~~~f~r~i~LP~~v~ 166 (201)
.|.+.+.++.+. ++|.+.+|+++ +++|.+..+.|.+++...... .......|.-.+.|...|
T Consensus 6 ~p~~~W~Q~~~~~~~~k~~V~ltI~~~~~~--~~~V~~~~~~l~~~~~~~~~~--------g~~~~~~y~~~l~L~~~I- 74 (134)
T 2cg9_X 6 NPQVAWAQRSSTTDPERNYVLITVSIADCD--APELTIKPSYIELKAQSKPHV--------GDENVHHYQLHIDLYKEI- 74 (134)
T ss_dssp -----CBCCCEEECCCSSEEEEECCCSSEE--SCCCCBCSSEEEECCEEC---------------CEEBCEEEECSSCC-
T ss_pred CCCEEEEeCCCCcCCcCCEEEEEEEecCCC--ceEEEEECCEEEEEEeccccc--------CCccCceEEEEEEChhhc-
Confidence 466788888776 99999999974 899999999999987642100 000124678889999999
Q ss_pred CCCceEEEEECCE-EEEEEeCcC
Q 044098 167 KFDDIKAGMKNGV-LKIVVPKVK 188 (201)
Q Consensus 167 d~~~I~A~~~nGv-L~I~lPK~~ 188 (201)
+++.-+..+.++. |.|+|.|..
T Consensus 75 dpe~S~~~v~~~~~vei~L~K~~ 97 (134)
T 2cg9_X 75 IPEKTMHKVANGQHYFLKLYKKD 97 (134)
T ss_dssp CSSSEEEEECCC--CEEEEEECS
T ss_pred cccccEEEECCCEEEEEEEEECC
Confidence 9999999999998 999999986
No 28
>3q9p_A Heat shock protein beta-1; alpha-crystallin domain, chaperone, charcot-marie-tooth DISE neuronopathy, IG-like fold, stress response; 2.00A {Homo sapiens} PDB: 3q9q_A
Probab=73.65 E-value=8.2 Score=25.99 Aligned_cols=34 Identities=21% Similarity=0.409 Sum_probs=29.3
Q ss_pred eEEEEEEECCCCCCCCCceEEEEECCEEEEEEeCcC
Q 044098 153 RRYSTRIDLPSNLYKFDDIKAGMKNGVLKIVVPKVK 188 (201)
Q Consensus 153 ~~f~r~i~LP~~v~d~~~I~A~~~nGvL~I~lPK~~ 188 (201)
..|.-.+.||. + +.+.|+..+++|+|+|.--+..
T Consensus 7 ~~~~v~~dlPG-~-~~edi~V~v~~~~L~I~g~~~~ 40 (85)
T 3q9p_A 7 DRWRVSLDVNH-F-APDELTVKTKDGVVEITGKHAA 40 (85)
T ss_dssp CEEEEEEECTT-T-CCSEEEEEEETTEEEEEEEEC-
T ss_pred CEEEEEEECCC-C-ChHHEEEEEECCEEEEEEEEcc
Confidence 47889999997 5 8999999999999999987653
No 29
>3gla_A Low molecular weight heat shock protein; HSPA, SHP, SHSP, high resolution, stress response, chaperone; 1.64A {Xanthomonas axonopodis PV} PDB: 3gt6_A 3guf_A
Probab=70.90 E-value=12 Score=25.68 Aligned_cols=36 Identities=25% Similarity=0.390 Sum_probs=30.1
Q ss_pred eeEEEEEEECCCCCCCCCceEEEEECCEEEEEEeCcCc
Q 044098 152 GRRYSTRIDLPSNLYKFDDIKAGMKNGVLKIVVPKVKE 189 (201)
Q Consensus 152 ~~~f~r~i~LP~~v~d~~~I~A~~~nGvL~I~lPK~~~ 189 (201)
...|.-.+.||. + +.++|+..+++|.|+|.--+..+
T Consensus 13 ~~~~~v~~~lPG-~-~~edi~v~~~~~~L~I~g~~~~~ 48 (100)
T 3gla_A 13 VNHFVLYADLPG-I-DPSQIEVQMDKGILSIRGERKSE 48 (100)
T ss_dssp SSEEEEEEECTT-S-CGGGCEEEEETTEEEEEEEECCG
T ss_pred CCEEEEEEECCC-C-CHHHEEEEEECCEEEEEEEEcCc
Confidence 347888899996 6 89999999999999999876543
No 30
>4eld_A MJ16.5-P1, small heat shock protein HSP16.5; chaperone; 2.70A {Methanocaldococcus jannaschii} PDB: 1shs_A
Probab=68.64 E-value=19 Score=27.01 Aligned_cols=34 Identities=18% Similarity=0.186 Sum_probs=28.7
Q ss_pred eEEEEEEECCCCCCCCCceEEEEECCEEEEEEeCcC
Q 044098 153 RRYSTRIDLPSNLYKFDDIKAGMKNGVLKIVVPKVK 188 (201)
Q Consensus 153 ~~f~r~i~LP~~v~d~~~I~A~~~nGvL~I~lPK~~ 188 (201)
..|.-.+.||. + +.+.|+..+++|+|+|+--+..
T Consensus 66 ~~~~v~~dlPG-~-~~edi~V~~~~~~L~I~g~~~~ 99 (161)
T 4eld_A 66 QHIKVIAWLPG-V-NKEDIILNAVGDTLEIRAKRSP 99 (161)
T ss_dssp SEEEEEEECTT-C-CGGGEEEEEETTEEEEEEECCC
T ss_pred CEEEEEEECCC-C-ChHhEEEEEECCEEEEEEEEcc
Confidence 36777788987 5 8999999999999999987665
No 31
>2y1y_A Alpha-crystallin B chain,; small heat shock protein, chaperone, stress protein, eye LEN protein, cataract; HET: MSE; 2.00A {Homo sapiens} PDB: 2y22_A 2wj7_A 3l1g_A 2y1z_A
Probab=67.26 E-value=9.9 Score=25.77 Aligned_cols=33 Identities=15% Similarity=0.330 Sum_probs=28.6
Q ss_pred eEEEEEEECCCCCCCCCceEEEEECCEEEEEEeCc
Q 044098 153 RRYSTRIDLPSNLYKFDDIKAGMKNGVLKIVVPKV 187 (201)
Q Consensus 153 ~~f~r~i~LP~~v~d~~~I~A~~~nGvL~I~lPK~ 187 (201)
..|.-.+.||. + +.+.|+..+++|.|+|..-+.
T Consensus 6 ~~~~v~~dlPG-~-~~edi~V~v~~~~L~I~g~~~ 38 (90)
T 2y1y_A 6 DRFSVNLDVKH-F-SPEELKVKVLGDVIEVHGKHE 38 (90)
T ss_dssp CCEEEEEECTT-S-CGGGEEEEEETTEEEEEEEEE
T ss_pred CEEEEEEECCC-C-cHHHeEEEEECCEEEEEEEEe
Confidence 46888999995 6 899999999999999998754
No 32
>2wj5_A Heat shock protein beta-6; chaperone, disulfide bond, stress response; 1.12A {Rattus norvegicus}
Probab=64.54 E-value=12 Score=26.09 Aligned_cols=34 Identities=9% Similarity=0.190 Sum_probs=29.2
Q ss_pred eEEEEEEECCCCCCCCCceEEEEECCEEEEEEeCcC
Q 044098 153 RRYSTRIDLPSNLYKFDDIKAGMKNGVLKIVVPKVK 188 (201)
Q Consensus 153 ~~f~r~i~LP~~v~d~~~I~A~~~nGvL~I~lPK~~ 188 (201)
..|.-.+.||. + +.+.|+..+++|.|+|.--+..
T Consensus 11 ~~~~v~~dlPG-~-~~edI~V~v~~~~L~I~g~~~~ 44 (101)
T 2wj5_A 11 GYFSVLLDVKH-F-SPEEISVKVVGDHVEVHARHEE 44 (101)
T ss_dssp SCEEEEEECTT-S-CGGGEEEEEETTEEEEEEEEEE
T ss_pred CEEEEEEECCC-C-cHHHeEEEEECCEEEEEEEEec
Confidence 46888999995 6 8999999999999999987653
No 33
>4fei_A Heat shock protein-related protein; stress response, alpha-crystallin domain fold, aggregates, C chaperone; 2.40A {Deinococcus radiodurans}
Probab=62.17 E-value=14 Score=25.58 Aligned_cols=34 Identities=9% Similarity=0.131 Sum_probs=28.3
Q ss_pred eEEEEEEcC-CCcccceEEEEECCEEEEEEeecCc
Q 044098 105 NLILKMDMP-GLSKEDVRVSVQQNTQIIKGEGPQN 138 (201)
Q Consensus 105 ~y~l~~dlP-G~~~edI~V~v~~~~L~I~g~~~~~ 138 (201)
.|.-.+.|| +++.+.++-++++|.|+|+-.+...
T Consensus 62 ~f~R~~~LP~~vd~~~i~A~~~~GvL~I~lpK~~~ 96 (102)
T 4fei_A 62 RFVRELAFPEPVRPASGVASLAGGVLTVRFEKLRP 96 (102)
T ss_dssp EEEEEEECSSCBCTTCCEEEEETTEEEEEEEBSSC
T ss_pred EEEEEEECCCCcchhHcEEEEECCEEEEEEEccCc
Confidence 455578899 5899999999999999999876544
No 34
>2nwt_A UPF0165 protein AF_2212; HOMO dimer protein, GFT structural genomics, PSI-2, protein structure initiative; NMR {Archaeoglobus fulgidus} SCOP: b.129.2.2
Probab=61.99 E-value=8.5 Score=25.54 Aligned_cols=17 Identities=35% Similarity=0.356 Sum_probs=13.3
Q ss_pred CceEEEEECCEEEEEEe
Q 044098 169 DDIKAGMKNGVLKIVVP 185 (201)
Q Consensus 169 ~~I~A~~~nGvL~I~lP 185 (201)
..|+|.|+||||+-.=|
T Consensus 3 k~IeAiYEnGVfkPLe~ 19 (69)
T 2nwt_A 3 KIIEAVYENGVFKPLQK 19 (69)
T ss_dssp CCEEEEEETTEEEESSC
T ss_pred ceEEEEEECCEEeECCc
Confidence 46999999999975433
No 35
>3l1e_A Alpha-crystallin A chain; lens transparency, polydispersity, protein aggregation, CRYS eye lens protein, chaperone; 1.15A {Bos taurus} PDB: 3l1f_A 3n3e_A
Probab=60.93 E-value=16 Score=25.61 Aligned_cols=34 Identities=9% Similarity=0.213 Sum_probs=29.0
Q ss_pred eeEEEEEEECCCCCCCCCceEEEEECCEEEEEEeCc
Q 044098 152 GRRYSTRIDLPSNLYKFDDIKAGMKNGVLKIVVPKV 187 (201)
Q Consensus 152 ~~~f~r~i~LP~~v~d~~~I~A~~~nGvL~I~lPK~ 187 (201)
...|.-.+.||. + +.+.|+..+++|.|+|.--+.
T Consensus 11 ~~~~~v~~dlPG-~-~~edi~V~v~~~~L~I~g~~~ 44 (106)
T 3l1e_A 11 RDKFVIFLDVKH-F-SPEDLTVKVQEDFVEIHGKHN 44 (106)
T ss_dssp SSEEEEEEECTT-S-CGGGEEEEEETTEEEEEEEEE
T ss_pred CCEEEEEEECCC-C-ChHHEEEEEECCEEEEEEEEc
Confidence 347888999996 6 899999999999999998643
No 36
>1gme_A Heat shock protein 16.9B; small heat shock protein, chaperone, alpha-crystallin; 2.70A {Triticum aestivum} SCOP: b.15.1.1 PDB: 2h50_A 2h53_A 2byu_A
Probab=55.35 E-value=37 Score=25.21 Aligned_cols=34 Identities=26% Similarity=0.417 Sum_probs=26.6
Q ss_pred EEEEEEECCCCCCCCCceEEEEE-CCEEEEEEeCcCc
Q 044098 154 RYSTRIDLPSNLYKFDDIKAGMK-NGVLKIVVPKVKE 189 (201)
Q Consensus 154 ~f~r~i~LP~~v~d~~~I~A~~~-nGvL~I~lPK~~~ 189 (201)
.|.-.+.||. + +.++|+..++ ++.|+|..-+..+
T Consensus 54 ~~~v~~dlPG-v-~kedI~V~v~~~~~L~I~g~~~~~ 88 (151)
T 1gme_A 54 AHVFKADLPG-V-KKEEVKVEVEDGNVLVVSGERTKE 88 (151)
T ss_dssp EEEEEEECTT-C-CGGGEEEEEETTTEEEEEECCCCC
T ss_pred EEEEEEECCC-C-ChHHEEEEEecCCEEEEEEEEccc
Confidence 4566678885 6 8899999995 5799999876644
No 37
>3aab_A Putative uncharacterized protein ST1653; alpha-crystallin domain, chaperone; 1.85A {Sulfolobus tokodaii} PDB: 3aac_A
Probab=54.21 E-value=30 Score=24.66 Aligned_cols=35 Identities=20% Similarity=0.163 Sum_probs=29.6
Q ss_pred eEEEEEEECCCCCCCCCceEEEEEC-CEEEEEEeCcCc
Q 044098 153 RRYSTRIDLPSNLYKFDDIKAGMKN-GVLKIVVPKVKE 189 (201)
Q Consensus 153 ~~f~r~i~LP~~v~d~~~I~A~~~n-GvL~I~lPK~~~ 189 (201)
..|.-.+.||. + +.++|+..+.+ |.|+|..-+..+
T Consensus 34 ~~~~v~~~lPG-~-~~edi~V~v~~~~~L~I~g~~~~~ 69 (123)
T 3aab_A 34 GYLVVVADLAG-F-NKEKIKARVSGQNELIIEAEREIT 69 (123)
T ss_dssp TEEEEEEECCS-C-CGGGCEEEEETTTEEEEEEECCCC
T ss_pred CEEEEEEECCC-C-CHHHEEEEEeCCCEEEEEEEEecc
Confidence 46778889996 6 89999999999 999999887643
No 38
>1vq8_E 50S ribosomal protein L6P; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: d.141.1.1 d.141.1.1 PDB: 1vq4_E* 1vq5_E* 1vq6_E* 1vq7_E* 1s72_E* 1vq9_E* 1vqk_E* 1vql_E* 1vqm_E* 1vqn_E* 1vqo_E* 1vqp_E* 1yhq_E* 1yi2_E* 1yij_E* 1yit_E* 1yj9_E* 1yjn_E* 1yjw_E* 2otj_E* ...
Probab=44.00 E-value=25 Score=27.44 Aligned_cols=46 Identities=15% Similarity=0.206 Sum_probs=31.7
Q ss_pred ccceEEEEECCEEEEEEeecCcCCCCCCCcccceeeeEEEEEEEC-CCCCCCCCceEEEEECCEEEEEEeCc
Q 044098 117 KEDVRVSVQQNTQIIKGEGPQNESESGGGDDDQENGRRYSTRIDL-PSNLYKFDDIKAGMKNGVLKIVVPKV 187 (201)
Q Consensus 117 ~edI~V~v~~~~L~I~g~~~~~~~~~~~~~~~e~~~~~f~r~i~L-P~~v~d~~~I~A~~~nGvL~I~lPK~ 187 (201)
|+.|+|+++++.++|+|.+. ..++ .| +.. ++...++|.|.|..+..
T Consensus 9 P~gV~v~i~~~~vtVkGpkG-----------------~L~~--~~~~~~------v~i~~~~~~i~v~~~~~ 55 (178)
T 1vq8_E 9 PEDVDAEQDHLDITVEGDNG-----------------SVTR--RLWYPD------IDVSVDGDTVVIESDED 55 (178)
T ss_dssp CTTCEEEEETTEEEEEETTE-----------------EEEE--ECCCTT------CEEEEETTEEEEECSCC
T ss_pred CCCCEEEEeCCEEEEECCCe-----------------EEEE--EEECCe------EEEEEECCEEEEEcCCC
Confidence 37789999999999998642 2233 33 333 44567899988886654
No 39
>2klr_A Alpha-crystallin B chain; protein, dimer, oligomer, heterogeneity, intermolecular INTE chaperone, SHSP, human, small heat-shock protein, cataract; NMR {Homo sapiens} PDB: 2ygd_A
Probab=43.99 E-value=29 Score=26.73 Aligned_cols=34 Identities=15% Similarity=0.309 Sum_probs=28.9
Q ss_pred eeEEEEEEECCCCCCCCCceEEEEECCEEEEEEeCc
Q 044098 152 GRRYSTRIDLPSNLYKFDDIKAGMKNGVLKIVVPKV 187 (201)
Q Consensus 152 ~~~f~r~i~LP~~v~d~~~I~A~~~nGvL~I~lPK~ 187 (201)
...|.-.+.||. + +.+.|+.++++|.|+|.--+.
T Consensus 72 ~d~~~v~~dlPG-~-~~edI~V~v~~~~L~I~g~~~ 105 (175)
T 2klr_A 72 KDRFSVNLDVKH-F-SPEELKVKVLGDVIEVHGKHE 105 (175)
T ss_dssp CSEEEEEECCSS-C-CGGGEEEEEETTEEEEEEEEE
T ss_pred CCeEEEEEECCC-C-ChHHEEEEEECCEEEEEEEEc
Confidence 347888899996 6 899999999999999998654
No 40
>1rl6_A Protein (ribosomal protein L6); RNA-binding protein, gentamicin resistance, alpha/beta protein; 2.00A {Geobacillus stearothermophilus} SCOP: d.141.1.1 d.141.1.1 PDB: 1giy_H 1ml5_h* 1c04_B 1yl3_H 2b66_H 2b9n_H 2b9p_H 1eg0_J 487d_J
Probab=43.67 E-value=63 Score=25.00 Aligned_cols=46 Identities=20% Similarity=0.343 Sum_probs=32.1
Q ss_pred ccceEEEEECCEEEEEEeecCcCCCCCCCcccceeeeEEEEEEECCCCCCCCCceEEEEECCEEEEEEeCc
Q 044098 117 KEDVRVSVQQNTQIIKGEGPQNESESGGGDDDQENGRRYSTRIDLPSNLYKFDDIKAGMKNGVLKIVVPKV 187 (201)
Q Consensus 117 ~edI~V~v~~~~L~I~g~~~~~~~~~~~~~~~e~~~~~f~r~i~LP~~v~d~~~I~A~~~nGvL~I~lPK~ 187 (201)
|+.|+|+++++.++|+|.. |..++ .|+..+ +...+||.|.|..+..
T Consensus 11 P~gV~V~i~~~~VtVkGpk-----------------G~L~~--~~~~~v------~i~~~~~~l~v~~~~~ 56 (177)
T 1rl6_A 11 PAGVTVTVNGNTVTVKGPK-----------------GELTR--TFHPDM------TITVEGNVITVTRPSD 56 (177)
T ss_dssp CTTCEEEEETTEEEEEETT-----------------EEEEE--ECCTTC------EEEEETTEEEEECSCC
T ss_pred CCCCEEEEeCCEEEEECCC-----------------eEEEE--EcCCCE------EEEEeCCEEEEEcCCC
Confidence 4778999999999999854 23333 344444 4567899988886644
No 41
>1rl1_A Suppressor of G2 allele of SKP1 homolog; beta sandwich, 7 beta strands, similar to P23, lacking LAST beta strand SEEN in P23, protein degradation; NMR {Homo sapiens} SCOP: b.15.1.3
Probab=42.69 E-value=37 Score=23.63 Aligned_cols=34 Identities=21% Similarity=0.243 Sum_probs=29.6
Q ss_pred CCeEEEEEEcCC-CcccceEEEEECCEEEEEEeec
Q 044098 103 DNNLILKMDMPG-LSKEDVRVSVQQNTQIIKGEGP 136 (201)
Q Consensus 103 ~d~y~l~~dlPG-~~~edI~V~v~~~~L~I~g~~~ 136 (201)
+..|.+.++|++ +.+++-+..+.++.|.|.=.+.
T Consensus 53 ~~~y~~~~~L~~~I~~e~s~~~~~~~~l~i~L~K~ 87 (114)
T 1rl1_A 53 GEDYNLKLELLHPIIPEQSTFKVLSTKIEIKLKKP 87 (114)
T ss_dssp SSEEEEEECBSSCCCGGGEEEEECSSSEEEEEECS
T ss_pred CcEEEEEeeCCCcCCccccEEEEECCEEEEEEEcC
Confidence 568999999998 7999999999999999986654
No 42
>2cql_A OK/SW-CL.103, 60S ribosomal protein L9; N-terminal domain, alpha and beta (A+B), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.141.1.1
Probab=38.59 E-value=23 Score=24.87 Aligned_cols=19 Identities=32% Similarity=0.560 Sum_probs=16.4
Q ss_pred ccceEEEEECCEEEEEEee
Q 044098 117 KEDVRVSVQQNTQIIKGEG 135 (201)
Q Consensus 117 ~edI~V~v~~~~L~I~g~~ 135 (201)
|+.|+|+++++.++|+|.+
T Consensus 20 P~gV~V~i~~~~VtVKGPk 38 (100)
T 2cql_A 20 PENVDITLKGRTVIVKGPR 38 (100)
T ss_dssp CSSCEEEEETTEEEEEETT
T ss_pred CCCCEEEEeCCEEEEECCC
Confidence 4788999999999999864
No 43
>1nkw_E 50S ribosomal protein L6; ribosome, large subunit, X- RAY structure, peptidyl-transferase, peptide bond formation; 3.10A {Deinococcus radiodurans} SCOP: i.1.1.2 PDB: 1sm1_E*
Probab=36.16 E-value=46 Score=26.69 Aligned_cols=46 Identities=15% Similarity=0.186 Sum_probs=31.5
Q ss_pred ccceEEEEECCEEEEEEeecCcCCCCCCCcccceeeeEEEEEEECCCCCCCCCceEEEEECCEEEEEEeCc
Q 044098 117 KEDVRVSVQQNTQIIKGEGPQNESESGGGDDDQENGRRYSTRIDLPSNLYKFDDIKAGMKNGVLKIVVPKV 187 (201)
Q Consensus 117 ~edI~V~v~~~~L~I~g~~~~~~~~~~~~~~~e~~~~~f~r~i~LP~~v~d~~~I~A~~~nGvL~I~lPK~ 187 (201)
|+.|+|+++++.++|+|... ..++ .|+.. |+...+||.|.|..+..
T Consensus 39 P~gV~V~i~~~~VtVKGPkG-----------------~L~~--~~~~~------v~i~~e~~~i~v~~~~~ 84 (212)
T 1nkw_E 39 PSGVTVNAQDGVFKVKGPKG-----------------ELTV--PYNTE------LTVRQDGDQLLVERPSD 84 (212)
T ss_pred CCCcEEEEeCCEEEEECCCE-----------------EEEE--ECCCC------eEEEEECCEEEEEcCCC
Confidence 37788999999999998642 3333 33433 44567899988886644
No 44
>2xcm_C SGT1-like protein, cytosolic heat shock protein 90; chaperone-protein binding complex, stress response; HET: ADP; 2.20A {Arabidopsis thaliana} PDB: 2jki_S*
Probab=36.08 E-value=31 Score=22.84 Aligned_cols=34 Identities=12% Similarity=0.117 Sum_probs=28.6
Q ss_pred CCeEEEEEEcCC-CcccceEEEEECCEEEEEEeec
Q 044098 103 DNNLILKMDMPG-LSKEDVRVSVQQNTQIIKGEGP 136 (201)
Q Consensus 103 ~d~y~l~~dlPG-~~~edI~V~v~~~~L~I~g~~~ 136 (201)
+..|.+.++|++ +.+++-+..+.++.|.|.=.+.
T Consensus 46 ~~~y~~~~~L~~~I~~~~s~~~~~~~~l~i~L~K~ 80 (92)
T 2xcm_C 46 EDAYYLQPRLFGKIIPDKCKYEVLSTKIEICLAKA 80 (92)
T ss_dssp SCCEEECCBBSSCBCGGGCEEEECSSCEEEEEEBS
T ss_pred CcEEEEeeEcCCccCchhEEEEEECCEEEEEEEcC
Confidence 457999999998 7899999999999998876654
No 45
>1ew4_A CYAY protein; friedreich ataxia, frataxin family, iron homeostasis, unknown function; 1.40A {Escherichia coli} SCOP: d.82.2.1 PDB: 2eff_A 2p1x_A 1soy_A
Probab=35.95 E-value=24 Score=25.04 Aligned_cols=17 Identities=35% Similarity=0.610 Sum_probs=14.9
Q ss_pred ceEEEEECCEEEEEEeC
Q 044098 170 DIKAGMKNGVLKIVVPK 186 (201)
Q Consensus 170 ~I~A~~~nGvL~I~lPK 186 (201)
.+.+++.+|||+|+++.
T Consensus 29 d~D~e~~~gVLti~f~~ 45 (106)
T 1ew4_A 29 DIDCEINGGVLTITFEN 45 (106)
T ss_dssp CCEEEEETTEEEEECTT
T ss_pred CEeeeccCCEEEEEECC
Confidence 48899999999999973
No 46
>2ks0_A Uncharacterized protein; YABP family, structural genomi 2, protein structure initiative, northeast structural genom consortium; NMR {Desulfitobacterium hafniense} PDB: 2kyi_A 3ipf_A
Probab=35.02 E-value=18 Score=23.95 Aligned_cols=23 Identities=22% Similarity=0.304 Sum_probs=19.5
Q ss_pred CCcccceEEEEECCEEEEEEeec
Q 044098 114 GLSKEDVRVSVQQNTQIIKGEGP 136 (201)
Q Consensus 114 G~~~edI~V~v~~~~L~I~g~~~ 136 (201)
-|+.+.|.+....|.|.|+|+.=
T Consensus 17 sFd~e~i~L~T~~G~L~IkG~~L 39 (71)
T 2ks0_A 17 SFDPKEILLETIQGVLSIKGEKL 39 (71)
T ss_dssp EECSSEEEEEETTEEEEEEEECC
T ss_pred EECCCEEEEEeCceEEEEEcCCc
Confidence 46789999999999999999853
No 47
>2gjh_A Designed protein; obligate symmetric HOMO-dimer, de novo protein; NMR {}
Probab=33.55 E-value=25 Score=21.78 Aligned_cols=22 Identities=18% Similarity=0.287 Sum_probs=18.6
Q ss_pred cccceEEEEECCEEEEEEeecC
Q 044098 116 SKEDVRVSVQQNTQIIKGEGPQ 137 (201)
Q Consensus 116 ~~edI~V~v~~~~L~I~g~~~~ 137 (201)
.-+||.|..+++++++.|+.+-
T Consensus 31 gyndinvtwdgdtvtvegqleg 52 (62)
T 2gjh_A 31 GYNDINVTWDGDTVTVEGQLEG 52 (62)
T ss_dssp TCCSCEEEECSSCEEEEEECCC
T ss_pred CcccceeEEcCCEEEEEeEEcC
Confidence 3479999999999999998654
No 48
>1qys_A TOP7; alpha-beta, novel fold, de novo protein; 2.50A {Computationally designed sequence} SCOP: k.41.1.1
Probab=32.54 E-value=42 Score=22.85 Aligned_cols=23 Identities=22% Similarity=0.371 Sum_probs=18.4
Q ss_pred CcccceEEEEECCEEEEEEeecC
Q 044098 115 LSKEDVRVSVQQNTQIIKGEGPQ 137 (201)
Q Consensus 115 ~~~edI~V~v~~~~L~I~g~~~~ 137 (201)
+.-+||.|.++++++++.|+.+-
T Consensus 74 lgyndinvtfdgdtvtvegqleg 96 (106)
T 1qys_A 74 LGYNDINVTFDGDTVTVEGQLEG 96 (106)
T ss_dssp TTCCEEEEEEETTEEEEEEEC--
T ss_pred hCCcceeEEEcCCeEEEEeEEcC
Confidence 44589999999999999998643
No 49
>3ug3_A Alpha-L-arabinofuranosidase; TIM barrel, hydrolase; 1.80A {Thermotoga maritima} PDB: 3ug4_A* 3ug5_A* 3s2c_A 4atw_A
Probab=32.44 E-value=1.4e+02 Score=26.86 Aligned_cols=34 Identities=12% Similarity=0.174 Sum_probs=23.5
Q ss_pred CCCCCCCCceEEEEECCEEEEEEeCcCcccCCCeeEeecC
Q 044098 162 PSNLYKFDDIKAGMKNGVLKIVVPKVKEDEAKNVFKVNVE 201 (201)
Q Consensus 162 P~~v~d~~~I~A~~~nGvL~I~lPK~~~~~~~~~i~I~IE 201 (201)
|+.| .+.. .+..++|.|+++||...- .++.+++|
T Consensus 471 P~~V-~p~~-~~~~~~~~~~~~lp~~S~----~vl~l~~~ 504 (504)
T 3ug3_A 471 PNVV-DITS-ETITVDTEFEHTFKPFSC----SVIEVELE 504 (504)
T ss_dssp TTSS-EEEE-EEEEECSEEEEEECTTEE----EEEEEEC-
T ss_pred CCEE-Eeee-eeEecCCEEEEEECCCEE----EEEEEEeC
Confidence 5666 5555 677789999999998732 35666654
No 50
>3iz5_F 60S ribosomal protein L9 (L6P); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_F
Probab=32.22 E-value=50 Score=25.91 Aligned_cols=46 Identities=13% Similarity=0.161 Sum_probs=30.9
Q ss_pred ccceEEEEECCEEEEEEeecCcCCCCCCCcccceeeeEEEEEEECCCCCCCCCceEEEE--ECCEEEEEEeC
Q 044098 117 KEDVRVSVQQNTQIIKGEGPQNESESGGGDDDQENGRRYSTRIDLPSNLYKFDDIKAGM--KNGVLKIVVPK 186 (201)
Q Consensus 117 ~edI~V~v~~~~L~I~g~~~~~~~~~~~~~~~e~~~~~f~r~i~LP~~v~d~~~I~A~~--~nGvL~I~lPK 186 (201)
|+.|+|+++++.++|+|.+. .-++ .|+. ..++..+ ++|.|.|..+.
T Consensus 13 P~gV~v~i~~~~V~VkGPkG-----------------~L~~--~~~~-----~~v~i~~~~~~~~l~v~~~~ 60 (190)
T 3iz5_F 13 PEGVTVQVAAKVVTVEGPRG-----------------KLTR--NFKH-----LNLDFQLLEGGRKLQVDAWF 60 (190)
T ss_dssp CTTCEEEEETTEEEEEETTE-----------------EEEE--ECCC-----TTEEEEEETTTTEEEEEESC
T ss_pred CCCCEEEEeCCEEEEECCCc-----------------eEEE--EccC-----CcEEEEEEcCCCEEEEEECC
Confidence 47899999999999998642 2223 3331 2244556 78888888654
No 51
>2kgs_A Uncharacterized protein RV0899/MT0922; outer membrane protein A, BON DO cell membrane, membrane, transmembrane, membrane protein; NMR {Mycobacterium tuberculosis} PDB: 2ksm_A
Probab=31.21 E-value=42 Score=24.46 Aligned_cols=27 Identities=26% Similarity=0.286 Sum_probs=23.8
Q ss_pred cCCCcccceEEEEECCEEEEEEeecCc
Q 044098 112 MPGLSKEDVRVSVQQNTQIIKGEGPQN 138 (201)
Q Consensus 112 lPG~~~edI~V~v~~~~L~I~g~~~~~ 138 (201)
-|.+++-.|.|.++++.++++|.....
T Consensus 2 ~~~~~p~~i~V~v~~G~VTLsG~Vp~~ 28 (132)
T 2kgs_A 2 ASALSLSLLSISRSGNTVTLIGDFPDE 28 (132)
T ss_dssp CCCCCEEEEEEEECSSEEEEEEEESCH
T ss_pred CCcccceeEEEEEECCEEEEEEECCCH
Confidence 477888999999999999999998654
No 52
>3j21_F 50S ribosomal protein L6P; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=30.16 E-value=47 Score=25.95 Aligned_cols=45 Identities=20% Similarity=0.190 Sum_probs=30.0
Q ss_pred ccceEEEEECCEEEEEEeecCcCCCCCCCcccceeeeEEEEEEECCCCCCCCCceEEEEECCEEEEEEe
Q 044098 117 KEDVRVSVQQNTQIIKGEGPQNESESGGGDDDQENGRRYSTRIDLPSNLYKFDDIKAGMKNGVLKIVVP 185 (201)
Q Consensus 117 ~edI~V~v~~~~L~I~g~~~~~~~~~~~~~~~e~~~~~f~r~i~LP~~v~d~~~I~A~~~nGvL~I~lP 185 (201)
|+.|+|+++++.++|+|.+. .-++ .|+. ..++..+++|.|.|..+
T Consensus 14 P~gV~v~i~~~~V~VkGpkG-----------------~L~~--~~~~-----~~v~i~~~~~~l~v~~~ 58 (184)
T 3j21_F 14 PEGVEVTVEGYKVKVKGPKG-----------------ELER--EFFW-----PGIQIFTEDGNVVIYKD 58 (184)
T ss_dssp CSSCEEEESSSEEEEECSSC-----------------EEEE--ECCC-----TTCEEEEETTEEEEECS
T ss_pred CCCcEEEEeCCEEEEEcCCe-----------------EEEE--EecC-----CcEEEEEeCCEEEEEEC
Confidence 37899999999999998642 2223 2321 12445678898888754
No 53
>3oeq_A Frataxin homolog, mitochondrial; alpha/beta sandwich, metallochaperone, iron-storage, transpo protein; 2.96A {Saccharomyces cerevisiae} SCOP: d.82.2.1 PDB: 2fql_A 3oer_A 2ga5_A
Probab=29.22 E-value=32 Score=25.22 Aligned_cols=16 Identities=19% Similarity=0.530 Sum_probs=14.4
Q ss_pred eEEEEECCEEEEEEeC
Q 044098 171 IKAGMKNGVLKIVVPK 186 (201)
Q Consensus 171 I~A~~~nGvL~I~lPK 186 (201)
+.+++.+|||+|+++.
T Consensus 49 ~Dve~~~gVLti~f~~ 64 (123)
T 3oeq_A 49 PDVELSHGVMTLEIPA 64 (123)
T ss_dssp CEEEECSSEEEEECTT
T ss_pred eEEEccCCEEEEEECC
Confidence 7899999999999974
No 54
>3jx8_A Putative lipoprotein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 2.16A {Parabacteroides distasonis atcc 8503}
Probab=28.50 E-value=82 Score=25.07 Aligned_cols=40 Identities=13% Similarity=0.044 Sum_probs=29.4
Q ss_pred eEEEEcCCeEEEEEEcCCCcccceEEEEECCEEEEEEeec
Q 044098 97 WLAKEDDNNLILKMDMPGLSKEDVRVSVQQNTQIIKGEGP 136 (201)
Q Consensus 97 ~dv~E~~d~y~l~~dlPG~~~edI~V~v~~~~L~I~g~~~ 136 (201)
+.+...++.+.|+++-+.--.+.|++++++++|.|+-+..
T Consensus 34 V~l~qgd~~~~V~i~~~~nl~~~i~~~v~~g~L~I~~~~~ 73 (250)
T 3jx8_A 34 FEYEQSDKAPYLSVTIDENLFDYLVTEVEGGTLKIYPKSI 73 (250)
T ss_dssp EEEEECSSCCEEEEEEEGGGGGGEEEEEETTEEEEEECBC
T ss_pred EEEEECCCCceEEEEECccccceEEEEEECCEEEEEEcCC
Confidence 4455554567777776655568999999999999987643
No 55
>3t3l_A Frataxin, mitochondrial; Fe-S cluster biosynthesis, human mitochondria, oxidoreductas; 1.15A {Homo sapiens} SCOP: d.82.2.1 PDB: 3s4m_A 3t3k_A 3t3j_A 3s5f_A 3t3x_A 3t3t_A 3s5e_A 3s5d_A 1ekg_A 1ly7_A
Probab=27.02 E-value=45 Score=24.57 Aligned_cols=17 Identities=24% Similarity=0.487 Sum_probs=15.1
Q ss_pred CceEEEEECCEEEEEEe
Q 044098 169 DDIKAGMKNGVLKIVVP 185 (201)
Q Consensus 169 ~~I~A~~~nGvL~I~lP 185 (201)
..+.+++.+|||+|+++
T Consensus 40 ~d~D~e~~~gVLti~f~ 56 (129)
T 3t3l_A 40 EDYDVSFGSGVLTVKLG 56 (129)
T ss_dssp TTCEEEEETTEEEEECC
T ss_pred cceeeecCCCEEEEEEc
Confidence 56889999999999996
No 56
>2o30_A Nuclear movement protein; MCSG, structural genomics, PSI-2, structure initiative; 1.66A {Encephalitozoon cuniculi}
Probab=25.55 E-value=95 Score=22.27 Aligned_cols=30 Identities=10% Similarity=0.089 Sum_probs=23.3
Q ss_pred EEEEEEECCCCCCCCCceEEEEECCEEEEEE
Q 044098 154 RYSTRIDLPSNLYKFDDIKAGMKNGVLKIVV 184 (201)
Q Consensus 154 ~f~r~i~LP~~v~d~~~I~A~~~nGvL~I~l 184 (201)
...-+|.||.++ +.+.+...++..-|.|.+
T Consensus 15 ~V~i~I~lp~~~-~~kdv~V~i~~~~l~v~~ 44 (131)
T 2o30_A 15 EINIQFPVTGDA-DSSAIKIRMVGKKICVKN 44 (131)
T ss_dssp EEEEEEECC----CCSCEEEEEETTEEEEEE
T ss_pred EEEEEEECCCCC-CccceEEEEECCEEEEEE
Confidence 445678999988 999999999999999987
No 57
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=24.73 E-value=2.1e+02 Score=22.99 Aligned_cols=64 Identities=14% Similarity=0.114 Sum_probs=39.6
Q ss_pred EcCCCcccceEEEEE--CCEEEEEEeecCcCCCCCCCcccceeeeEEEEEEECCCCCCCCCceEEEEECCEEEEE
Q 044098 111 DMPGLSKEDVRVSVQ--QNTQIIKGEGPQNESESGGGDDDQENGRRYSTRIDLPSNLYKFDDIKAGMKNGVLKIV 183 (201)
Q Consensus 111 dlPG~~~edI~V~v~--~~~L~I~g~~~~~~~~~~~~~~~e~~~~~f~r~i~LP~~v~d~~~I~A~~~nGvL~I~ 183 (201)
.|||+..+==-+... +++|.+........ ..-... +...+++.|...- |.+.|... .+|.+.|.
T Consensus 21 ~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I------~~ld~~-g~v~~~i~l~g~~-D~EGIa~~-~~g~~~vs 86 (255)
T 3qqz_A 21 EIAGITNNISSLTWSAQSNTLFSTINKPAAI------VEMTTN-GDLIRTIPLDFVK-DLETIEYI-GDNQFVIS 86 (255)
T ss_dssp ECTTCCSCEEEEEEETTTTEEEEEEETTEEE------EEEETT-CCEEEEEECSSCS-SEEEEEEC-STTEEEEE
T ss_pred ECCCcccCcceeEEeCCCCEEEEEECCCCeE------EEEeCC-CCEEEEEecCCCC-ChHHeEEe-CCCEEEEE
Confidence 599998753337776 57888755432110 111222 7788999998766 88888653 56665553
No 58
>3rd4_A Uncharacterized protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, propen_03304, unknown function; 2.90A {Proteus penneri}
Probab=24.31 E-value=51 Score=23.30 Aligned_cols=25 Identities=8% Similarity=0.193 Sum_probs=20.8
Q ss_pred EcCCeEEEEEEcCCCcccceEEEEE
Q 044098 101 EDDNNLILKMDMPGLSKEDVRVSVQ 125 (201)
Q Consensus 101 E~~d~y~l~~dlPG~~~edI~V~v~ 125 (201)
+++..|.|.+.||.-.-+.+++.+.
T Consensus 33 ~~~~~Y~itF~~p~~~G~~~ef~v~ 57 (100)
T 3rd4_A 33 EITHYYQVTFRLTTDDRKDLVLNID 57 (100)
T ss_dssp -CCCEEEEEEEESSSSCEEEEEECC
T ss_pred CCceEEEEEEEecCCCCCeEEEEEC
Confidence 6678999999999888888888876
No 59
>2qzi_A Uncharacterized protein; APC86636, streptococcus thermophilus LMG 18311, structural G PSI-2, protein structure initiative; 2.20A {Streptococcus thermophilus}
Probab=21.09 E-value=89 Score=22.14 Aligned_cols=27 Identities=11% Similarity=0.373 Sum_probs=23.5
Q ss_pred CCCCCCCCCceEEEEECCEEEEEEeCc
Q 044098 161 LPSNLYKFDDIKAGMKNGVLKIVVPKV 187 (201)
Q Consensus 161 LP~~v~d~~~I~A~~~nGvL~I~lPK~ 187 (201)
+|...|+.++++.-+.+++..|.+|..
T Consensus 76 i~~~~~~~~~i~~~~~~~liEIsip~~ 102 (103)
T 2qzi_A 76 IDKDIVLMDKLRTVHTDKLIEISFPTT 102 (103)
T ss_dssp CCGGGBCTTCCEEEEETTEEEEEEEBC
T ss_pred ccccccccccceEeccCCeEEEEcccc
Confidence 566677999999999999999999964
No 60
>3pet_A Putative adhesin; right-handed beta-helix, structural genomics, joint center F structural genomics, JCSG; HET: PG4; 2.07A {Bacteroides fragilis nctc 9343}
Probab=20.13 E-value=1.2e+02 Score=23.59 Aligned_cols=32 Identities=19% Similarity=0.264 Sum_probs=0.0
Q ss_pred CceEEEEECCEEEEEEeCcCcccCCCeeEeec
Q 044098 169 DDIKAGMKNGVLKIVVPKVKEDEAKNVFKVNV 200 (201)
Q Consensus 169 ~~I~A~~~nGvL~I~lPK~~~~~~~~~i~I~I 200 (201)
+.++.+.+||.|+|...+...-.....+.|.|
T Consensus 54 ~~i~~~v~~g~L~I~~~~~~~~~~~~~~~i~V 85 (221)
T 3pet_A 54 ALIQVAVKDNTLFLSIDKSKKVRNFKKMKITI 85 (221)
T ss_dssp TTEEEEEETTEEEEEECTTCCBSCCTTCEEEE
T ss_pred ceEEEEEECCEEEEEEcCCcccCCCCeEEEEE
Done!