BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 044104
(128 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P49359|GCSH_FLAPR Glycine cleavage system H protein, mitochondrial OS=Flaveria
pringlei GN=GDCSH PE=2 SV=1
Length = 162
Score = 188 bits (477), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 88/125 (70%), Positives = 105/125 (84%)
Query: 4 LKYADSHEWVKVDGNSATIGITDHAQDHLGDVVYVELPEVGVTVKQDASFGAVESVKATS 63
LKYA+SHEWVK +G+ ATIGITDHAQDHLG+VV+V+LPE G +V + FGAVESVKATS
Sbjct: 38 LKYANSHEWVKHEGSVATIGITDHAQDHLGEVVFVDLPEAGGSVTKATGFGAVESVKATS 97
Query: 64 DVNSPVSGKVVEVNEELSSSPALVNSSPYEDGWIIKVEMDNAGELKKLMDADQYTKFCEE 123
DVNSP+SG++VEVN +LS +P L+NSSPYEDGW+IKV+ N EL LM A +YTKFCEE
Sbjct: 98 DVNSPISGEIVEVNSKLSETPGLINSSPYEDGWMIKVKPSNPSELDSLMGAKEYTKFCEE 157
Query: 124 EDSKH 128
EDS H
Sbjct: 158 EDSAH 162
>sp|Q39732|GCSH_FLAAN Glycine cleavage system H protein, mitochondrial OS=Flaveria
anomala GN=GDCSH PE=2 SV=1
Length = 162
Score = 187 bits (475), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 87/125 (69%), Positives = 105/125 (84%)
Query: 4 LKYADSHEWVKVDGNSATIGITDHAQDHLGDVVYVELPEVGVTVKQDASFGAVESVKATS 63
LKYA+SHEWVK +G+ ATIGITDHAQDHLG+VV+V+LPE G +V + FGAVESVKATS
Sbjct: 38 LKYANSHEWVKHEGSVATIGITDHAQDHLGEVVFVDLPEAGGSVTKATGFGAVESVKATS 97
Query: 64 DVNSPVSGKVVEVNEELSSSPALVNSSPYEDGWIIKVEMDNAGELKKLMDADQYTKFCEE 123
DVNSP+SG++VEVN +LS +P L+NSSPYEDGW+IKV+ N EL LM A +YTKFCEE
Sbjct: 98 DVNSPISGEIVEVNSKLSETPGLINSSPYEDGWMIKVKPSNPSELDSLMGAKEYTKFCEE 157
Query: 124 EDSKH 128
ED+ H
Sbjct: 158 EDAAH 162
>sp|P16048|GCSH_PEA Glycine cleavage system H protein, mitochondrial OS=Pisum sativum
GN=GDCSH PE=1 SV=1
Length = 165
Score = 182 bits (462), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 85/125 (68%), Positives = 104/125 (83%)
Query: 4 LKYADSHEWVKVDGNSATIGITDHAQDHLGDVVYVELPEVGVTVKQDASFGAVESVKATS 63
LKYA SHEWVK +G+ ATIGITDHAQDHLG+VV+VELPE GV+V + FGAVESVKATS
Sbjct: 41 LKYAPSHEWVKHEGSVATIGITDHAQDHLGEVVFVELPEPGVSVTKGKGFGAVESVKATS 100
Query: 64 DVNSPVSGKVVEVNEELSSSPALVNSSPYEDGWIIKVEMDNAGELKKLMDADQYTKFCEE 123
DVNSP+SG+V+EVN L+ P L+NSSPYEDGW+IK++ + EL+ L+ A +YTKFCEE
Sbjct: 101 DVNSPISGEVIEVNTGLTGKPGLINSSPYEDGWMIKIKPTSPDELESLLGAKEYTKFCEE 160
Query: 124 EDSKH 128
ED+ H
Sbjct: 161 EDAAH 165
>sp|Q9LQL0|GCSH2_ARATH Probable glycine cleavage system H protein 2, mitochondrial
OS=Arabidopsis thaliana GN=At1g32470 PE=1 SV=1
Length = 166
Score = 181 bits (460), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 83/128 (64%), Positives = 107/128 (83%)
Query: 1 IKDLKYADSHEWVKVDGNSATIGITDHAQDHLGDVVYVELPEVGVTVKQDASFGAVESVK 60
++ LKYA+SHEWVK +G+ ATIGITDHAQDHLG+VV+VELPE +V ++ SFGAVESVK
Sbjct: 39 LEGLKYANSHEWVKHEGSVATIGITDHAQDHLGEVVFVELPEANSSVSKEKSFGAVESVK 98
Query: 61 ATSDVNSPVSGKVVEVNEELSSSPALVNSSPYEDGWIIKVEMDNAGELKKLMDADQYTKF 120
ATS++ SP+SG+V+EVN +L+ SP L+NSSPYEDGW+IKV+ + EL+ LM +YTKF
Sbjct: 99 ATSEILSPISGEVIEVNTKLTESPGLINSSPYEDGWMIKVKPSSPAELEALMGPKEYTKF 158
Query: 121 CEEEDSKH 128
CEEED+ H
Sbjct: 159 CEEEDAAH 166
>sp|P46485|GCSH_FLATR Glycine cleavage system H protein, mitochondrial OS=Flaveria
trinervia GN=GDCSH PE=2 SV=1
Length = 165
Score = 181 bits (459), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 84/123 (68%), Positives = 102/123 (82%)
Query: 4 LKYADSHEWVKVDGNSATIGITDHAQDHLGDVVYVELPEVGVTVKQDASFGAVESVKATS 63
LKYA+SHEWVK +G+ ATIGITDHAQDHLG+VV+VELPEVG +V + FGAVESVKATS
Sbjct: 40 LKYANSHEWVKHEGSVATIGITDHAQDHLGEVVFVELPEVGGSVTKATGFGAVESVKATS 99
Query: 64 DVNSPVSGKVVEVNEELSSSPALVNSSPYEDGWIIKVEMDNAGELKKLMDADQYTKFCEE 123
DVNSP+SG++VEVN +L+ +P L+N SPYEDGW+IKV+ N EL LM +YTKFCEE
Sbjct: 100 DVNSPISGEIVEVNSKLTKTPGLINKSPYEDGWMIKVKPSNPSELDSLMGPKEYTKFCEE 159
Query: 124 EDS 126
E +
Sbjct: 160 EGA 162
>sp|P25855|GCSH1_ARATH Glycine cleavage system H protein 1, mitochondrial OS=Arabidopsis
thaliana GN=GDCSH PE=1 SV=1
Length = 165
Score = 178 bits (452), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 81/128 (63%), Positives = 107/128 (83%)
Query: 1 IKDLKYADSHEWVKVDGNSATIGITDHAQDHLGDVVYVELPEVGVTVKQDASFGAVESVK 60
++ LKYA+SHEWVK +G+ ATIGIT HAQDHLG+VV+VELPE +V ++ SFGAVESVK
Sbjct: 38 LEGLKYANSHEWVKHEGSVATIGITAHAQDHLGEVVFVELPEDNTSVSKEKSFGAVESVK 97
Query: 61 ATSDVNSPVSGKVVEVNEELSSSPALVNSSPYEDGWIIKVEMDNAGELKKLMDADQYTKF 120
ATS++ SP+SG+++EVN++L+ SP L+NSSPYEDGW+IKV+ + EL+ LM +YTKF
Sbjct: 98 ATSEILSPISGEIIEVNKKLTESPGLINSSPYEDGWMIKVKPSSPAELESLMGPKEYTKF 157
Query: 121 CEEEDSKH 128
CEEED+ H
Sbjct: 158 CEEEDAAH 165
>sp|A3C6G9|GCSH_ORYSJ Glycine cleavage system H protein, mitochondrial OS=Oryza sativa
subsp. japonica GN=GDCSH PE=1 SV=1
Length = 164
Score = 177 bits (449), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 83/123 (67%), Positives = 101/123 (82%)
Query: 4 LKYADSHEWVKVDGNSATIGITDHAQDHLGDVVYVELPEVGVTVKQDASFGAVESVKATS 63
LKY+ SHEWVK DG+ ATIGITDHAQ HLG+VV+VELPE G V Q +FG VESVKATS
Sbjct: 41 LKYSSSHEWVKNDGSVATIGITDHAQGHLGEVVFVELPEAGAKVSQGGAFGNVESVKATS 100
Query: 64 DVNSPVSGKVVEVNEELSSSPALVNSSPYEDGWIIKVEMDNAGELKKLMDADQYTKFCEE 123
D+NSP+SG+VVEVN++LS +P L+NSSPYEDGW+IKV+ + EL L+D +YTK CEE
Sbjct: 101 DINSPISGEVVEVNDKLSETPGLINSSPYEDGWMIKVKPSSPSELDALLDPAKYTKHCEE 160
Query: 124 EDS 126
ED+
Sbjct: 161 EDA 163
>sp|A2Z9B8|GCSH_ORYSI Glycine cleavage system H protein, mitochondrial OS=Oryza sativa
subsp. indica GN=GDCSH PE=2 SV=1
Length = 164
Score = 177 bits (449), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 83/123 (67%), Positives = 101/123 (82%)
Query: 4 LKYADSHEWVKVDGNSATIGITDHAQDHLGDVVYVELPEVGVTVKQDASFGAVESVKATS 63
LKY+ SHEWVK DG+ ATIGITDHAQ HLG+VV+VELPE G V Q +FG VESVKATS
Sbjct: 41 LKYSSSHEWVKNDGSVATIGITDHAQGHLGEVVFVELPEAGAKVSQGGAFGNVESVKATS 100
Query: 64 DVNSPVSGKVVEVNEELSSSPALVNSSPYEDGWIIKVEMDNAGELKKLMDADQYTKFCEE 123
D+NSP+SG+VVEVN++LS +P L+NSSPYEDGW+IKV+ + EL L+D +YTK CEE
Sbjct: 101 DINSPISGEVVEVNDKLSETPGLINSSPYEDGWMIKVKPSSPSELDALLDPAKYTKHCEE 160
Query: 124 EDS 126
ED+
Sbjct: 161 EDA 163
>sp|P93255|GCSH_MESCR Glycine cleavage system H protein, mitochondrial
OS=Mesembryanthemum crystallinum GN=GDCSH PE=2 SV=1
Length = 163
Score = 170 bits (430), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 82/126 (65%), Positives = 99/126 (78%), Gaps = 1/126 (0%)
Query: 1 IKDLKYADSHEWVKVDGNSATIGITDHAQDHLGDVVYVELPEVGVTVKQDASFGAVESVK 60
+ LKYA SHEWVK G+ ATIGITDHAQ HLGDVV+ ELPE G V F +VESVK
Sbjct: 38 LDGLKYASSHEWVKHGGSVATIGITDHAQGHLGDVVFAELPEGGA-VSAGKPFASVESVK 96
Query: 61 ATSDVNSPVSGKVVEVNEELSSSPALVNSSPYEDGWIIKVEMDNAGELKKLMDADQYTKF 120
ATSDVNSP+SG++VEVN +LS SP L+NSSPYE+GW++KV+ N EL+ LM + +YTKF
Sbjct: 97 ATSDVNSPISGEIVEVNTKLSDSPGLLNSSPYEEGWMVKVKPSNPAELESLMGSKEYTKF 156
Query: 121 CEEEDS 126
CEEED+
Sbjct: 157 CEEEDA 162
>sp|P49360|GCSH_FLAPU Glycine cleavage system H protein, mitochondrial (Fragment)
OS=Flaveria pubescens GN=GDCSH PE=2 SV=1
Length = 152
Score = 167 bits (422), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 78/115 (67%), Positives = 96/115 (83%)
Query: 4 LKYADSHEWVKVDGNSATIGITDHAQDHLGDVVYVELPEVGVTVKQDASFGAVESVKATS 63
LKYA+SHEWVK +G+ AT+GITDHAQDHLG+VV+V+LPE G +V + FGAVESVKATS
Sbjct: 38 LKYANSHEWVKHEGSVATVGITDHAQDHLGEVVFVDLPEAGGSVTKATGFGAVESVKATS 97
Query: 64 DVNSPVSGKVVEVNEELSSSPALVNSSPYEDGWIIKVEMDNAGELKKLMDADQYT 118
DVNSP+SG++VEVN +LS +P L+NSSPYEDGW+IKV+ N EL LM A +YT
Sbjct: 98 DVNSPISGEIVEVNSKLSETPGLINSSPYEDGWMIKVKPSNPSELDSLMGAKEYT 152
>sp|C0ZL15|GCSH_BREBN Glycine cleavage system H protein OS=Brevibacillus brevis (strain
47 / JCM 6285 / NBRC 100599) GN=gcvH PE=3 SV=1
Length = 126
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 73/122 (59%), Positives = 94/122 (77%)
Query: 2 KDLKYADSHEWVKVDGNSATIGITDHAQDHLGDVVYVELPEVGVTVKQDASFGAVESVKA 61
K+L+Y++ HEWV+V+GN A IGIT AQ LGD+V+VELPEVG T++QD FG+VESVK
Sbjct: 5 KNLRYSEEHEWVRVEGNKAYIGITSFAQAELGDIVFVELPEVGATIQQDEPFGSVESVKT 64
Query: 62 TSDVNSPVSGKVVEVNEELSSSPALVNSSPYEDGWIIKVEMDNAGELKKLMDADQYTKFC 121
S++ +PV+GKVVEVN EL +P LVNSSPYE W+I VE+ + EL KLMDAD+Y
Sbjct: 65 VSELYAPVTGKVVEVNGELEDAPELVNSSPYEQAWMIVVELSDTAELDKLMDADKYEAMV 124
Query: 122 EE 123
+E
Sbjct: 125 KE 126
>sp|Q67N37|GCSH_SYMTH Glycine cleavage system H protein OS=Symbiobacterium thermophilum
(strain T / IAM 14863) GN=gcvH PE=3 SV=1
Length = 128
Score = 149 bits (376), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 70/121 (57%), Positives = 87/121 (71%)
Query: 3 DLKYADSHEWVKVDGNSATIGITDHAQDHLGDVVYVELPEVGVTVKQDASFGAVESVKAT 62
DLKY+ HEW++V+GN +GIT AQD LGDVV+VELPEVG +KQ+ FG VESVK
Sbjct: 7 DLKYSKEHEWIRVEGNIGIVGITWFAQDQLGDVVFVELPEVGRELKQNEQFGVVESVKTV 66
Query: 63 SDVNSPVSGKVVEVNEELSSSPALVNSSPYEDGWIIKVEMDNAGELKKLMDADQYTKFCE 122
SD+ P SGKVVEVN +L SSP L+N PY +GWI+K+E+ N EL L+DA Y F +
Sbjct: 67 SDLYCPASGKVVEVNTKLESSPELINQDPYGEGWILKLELSNPAELDNLLDAAAYDAFTK 126
Query: 123 E 123
E
Sbjct: 127 E 127
>sp|A9VNZ4|GCSH_BACWK Glycine cleavage system H protein OS=Bacillus weihenstephanensis
(strain KBAB4) GN=gcvH PE=3 SV=1
Length = 127
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 66/121 (54%), Positives = 92/121 (76%)
Query: 3 DLKYADSHEWVKVDGNSATIGITDHAQDHLGDVVYVELPEVGVTVKQDASFGAVESVKAT 62
+L+Y++ HEWVK +GN+ IGIT AQ LGD+V+VELPEVG T++ D FG+VESVK
Sbjct: 6 NLRYSEEHEWVKTEGNAVVIGITHFAQGELGDIVFVELPEVGATIQADEPFGSVESVKTV 65
Query: 63 SDVNSPVSGKVVEVNEELSSSPALVNSSPYEDGWIIKVEMDNAGELKKLMDADQYTKFCE 122
S++ +PVSGKVV VNEELS P LVN SPYE W++KVE+ +A +++KL+ A++Y +
Sbjct: 66 SELYAPVSGKVVAVNEELSDQPELVNESPYEGAWMVKVELSDASQVEKLLTAEKYAEMTN 125
Query: 123 E 123
+
Sbjct: 126 Q 126
>sp|Q6HBR6|GCSH_BACHK Glycine cleavage system H protein OS=Bacillus thuringiensis subsp.
konkukian (strain 97-27) GN=gcvH PE=3 SV=1
Length = 127
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 66/119 (55%), Positives = 91/119 (76%)
Query: 3 DLKYADSHEWVKVDGNSATIGITDHAQDHLGDVVYVELPEVGVTVKQDASFGAVESVKAT 62
+L+Y++ HEWVK +GN IGIT AQ+ LGD+V+VELPEVG T++ D FG+VESVK
Sbjct: 6 NLRYSEEHEWVKTEGNEVVIGITHFAQNELGDIVFVELPEVGATIEADEPFGSVESVKTV 65
Query: 63 SDVNSPVSGKVVEVNEELSSSPALVNSSPYEDGWIIKVEMDNAGELKKLMDADQYTKFC 121
S++ +PVSGKVV VNEELS P LVN SPYE W++KVE+ +A +++KL+ A++Y +
Sbjct: 66 SELYAPVSGKVVAVNEELSDQPELVNESPYEGAWMVKVELSDASQVEKLLTAEKYAEMT 124
>sp|Q631X9|GCSH_BACCZ Glycine cleavage system H protein OS=Bacillus cereus (strain ZK /
E33L) GN=gcvH PE=3 SV=1
Length = 127
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 66/119 (55%), Positives = 91/119 (76%)
Query: 3 DLKYADSHEWVKVDGNSATIGITDHAQDHLGDVVYVELPEVGVTVKQDASFGAVESVKAT 62
+L+Y++ HEWVK +GN IGIT AQ+ LGD+V+VELPEVG T++ D FG+VESVK
Sbjct: 6 NLRYSEEHEWVKTEGNEVVIGITHFAQNELGDIVFVELPEVGATIEADEPFGSVESVKTV 65
Query: 63 SDVNSPVSGKVVEVNEELSSSPALVNSSPYEDGWIIKVEMDNAGELKKLMDADQYTKFC 121
S++ +PVSGKVV VNEELS P LVN SPYE W++KVE+ +A +++KL+ A++Y +
Sbjct: 66 SELYAPVSGKVVAVNEELSDQPELVNESPYEGAWMVKVELSDASQVEKLLTAEKYAEMT 124
>sp|C1EY77|GCSH_BACC3 Glycine cleavage system H protein OS=Bacillus cereus (strain
03BB102) GN=gcvH PE=3 SV=1
Length = 127
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 66/119 (55%), Positives = 91/119 (76%)
Query: 3 DLKYADSHEWVKVDGNSATIGITDHAQDHLGDVVYVELPEVGVTVKQDASFGAVESVKAT 62
+L+Y++ HEWVK +GN IGIT AQ+ LGD+V+VELPEVG T++ D FG+VESVK
Sbjct: 6 NLRYSEEHEWVKTEGNEVVIGITHFAQNELGDIVFVELPEVGATIEADEPFGSVESVKTV 65
Query: 63 SDVNSPVSGKVVEVNEELSSSPALVNSSPYEDGWIIKVEMDNAGELKKLMDADQYTKFC 121
S++ +PVSGKVV VNEELS P LVN SPYE W++KVE+ +A +++KL+ A++Y +
Sbjct: 66 SELYAPVSGKVVAVNEELSDQPELVNESPYEGAWMVKVELSDASQVEKLLTAEKYAEMT 124
>sp|B7JEE3|GCSH_BACC0 Glycine cleavage system H protein OS=Bacillus cereus (strain AH820)
GN=gcvH PE=3 SV=1
Length = 127
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 66/119 (55%), Positives = 91/119 (76%)
Query: 3 DLKYADSHEWVKVDGNSATIGITDHAQDHLGDVVYVELPEVGVTVKQDASFGAVESVKAT 62
+L+Y++ HEWVK +GN IGIT AQ+ LGD+V+VELPEVG T++ D FG+VESVK
Sbjct: 6 NLRYSEEHEWVKTEGNEVVIGITHFAQNELGDIVFVELPEVGATIEADEPFGSVESVKTV 65
Query: 63 SDVNSPVSGKVVEVNEELSSSPALVNSSPYEDGWIIKVEMDNAGELKKLMDADQYTKFC 121
S++ +PVSGKVV VNEELS P LVN SPYE W++KVE+ +A +++KL+ A++Y +
Sbjct: 66 SELYAPVSGKVVAVNEELSDQPELVNESPYEGAWMVKVELSDASQVEKLLTAEKYAEMT 124
>sp|Q81XK8|GCSH_BACAN Glycine cleavage system H protein OS=Bacillus anthracis GN=gcvH
PE=3 SV=1
Length = 127
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 66/119 (55%), Positives = 91/119 (76%)
Query: 3 DLKYADSHEWVKVDGNSATIGITDHAQDHLGDVVYVELPEVGVTVKQDASFGAVESVKAT 62
+L+Y++ HEWVK +GN IGIT AQ+ LGD+V+VELPEVG T++ D FG+VESVK
Sbjct: 6 NLRYSEEHEWVKTEGNEVVIGITHFAQNELGDIVFVELPEVGATIEADEPFGSVESVKTV 65
Query: 63 SDVNSPVSGKVVEVNEELSSSPALVNSSPYEDGWIIKVEMDNAGELKKLMDADQYTKFC 121
S++ +PVSGKVV VNEELS P LVN SPYE W++KVE+ +A +++KL+ A++Y +
Sbjct: 66 SELYAPVSGKVVAVNEELSDQPELVNESPYEGAWMVKVELSDASQVEKLLTAEKYAEMT 124
>sp|C3LCC7|GCSH_BACAC Glycine cleavage system H protein OS=Bacillus anthracis (strain CDC
684 / NRRL 3495) GN=gcvH PE=3 SV=1
Length = 127
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 66/119 (55%), Positives = 91/119 (76%)
Query: 3 DLKYADSHEWVKVDGNSATIGITDHAQDHLGDVVYVELPEVGVTVKQDASFGAVESVKAT 62
+L+Y++ HEWVK +GN IGIT AQ+ LGD+V+VELPEVG T++ D FG+VESVK
Sbjct: 6 NLRYSEEHEWVKTEGNEVVIGITHFAQNELGDIVFVELPEVGATIEADEPFGSVESVKTV 65
Query: 63 SDVNSPVSGKVVEVNEELSSSPALVNSSPYEDGWIIKVEMDNAGELKKLMDADQYTKFC 121
S++ +PVSGKVV VNEELS P LVN SPYE W++KVE+ +A +++KL+ A++Y +
Sbjct: 66 SELYAPVSGKVVAVNEELSDQPELVNESPYEGAWMVKVELSDASQVEKLLTAEKYAEMT 124
>sp|C3PDM2|GCSH_BACAA Glycine cleavage system H protein OS=Bacillus anthracis (strain
A0248) GN=gcvH PE=3 SV=1
Length = 127
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 66/119 (55%), Positives = 91/119 (76%)
Query: 3 DLKYADSHEWVKVDGNSATIGITDHAQDHLGDVVYVELPEVGVTVKQDASFGAVESVKAT 62
+L+Y++ HEWVK +GN IGIT AQ+ LGD+V+VELPEVG T++ D FG+VESVK
Sbjct: 6 NLRYSEEHEWVKTEGNEVVIGITHFAQNELGDIVFVELPEVGATIEADEPFGSVESVKTV 65
Query: 63 SDVNSPVSGKVVEVNEELSSSPALVNSSPYEDGWIIKVEMDNAGELKKLMDADQYTKFC 121
S++ +PVSGKVV VNEELS P LVN SPYE W++KVE+ +A +++KL+ A++Y +
Sbjct: 66 SELYAPVSGKVVAVNEELSDQPELVNESPYEGAWMVKVELSDASQVEKLLTAEKYAEMT 124
>sp|B9J3J0|GCSH_BACCQ Glycine cleavage system H protein OS=Bacillus cereus (strain Q1)
GN=gcvH PE=3 SV=1
Length = 127
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 66/119 (55%), Positives = 90/119 (75%)
Query: 3 DLKYADSHEWVKVDGNSATIGITDHAQDHLGDVVYVELPEVGVTVKQDASFGAVESVKAT 62
+L+Y++ HEWVK +GN IGIT AQ LGD+V+VELPEVG T++ D FG+VESVK
Sbjct: 6 NLRYSEEHEWVKTEGNEVVIGITHFAQSELGDIVFVELPEVGATIEADEPFGSVESVKTV 65
Query: 63 SDVNSPVSGKVVEVNEELSSSPALVNSSPYEDGWIIKVEMDNAGELKKLMDADQYTKFC 121
S++ +PVSGKVV VNEELS P LVN SPYE W++KVE+ +A +++KL+ A++Y +
Sbjct: 66 SELYAPVSGKVVAVNEELSDQPELVNESPYEGAWMVKVELSDASQVEKLLTAEKYAEMT 124
>sp|B7HUY1|GCSH_BACC7 Glycine cleavage system H protein OS=Bacillus cereus (strain AH187)
GN=gcvH PE=3 SV=1
Length = 127
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 66/119 (55%), Positives = 90/119 (75%)
Query: 3 DLKYADSHEWVKVDGNSATIGITDHAQDHLGDVVYVELPEVGVTVKQDASFGAVESVKAT 62
+L+Y++ HEWVK +GN IGIT AQ LGD+V+VELPEVG T++ D FG+VESVK
Sbjct: 6 NLRYSEEHEWVKTEGNEVVIGITHFAQSELGDIVFVELPEVGATIEADEPFGSVESVKTV 65
Query: 63 SDVNSPVSGKVVEVNEELSSSPALVNSSPYEDGWIIKVEMDNAGELKKLMDADQYTKFC 121
S++ +PVSGKVV VNEELS P LVN SPYE W++KVE+ +A +++KL+ A++Y +
Sbjct: 66 SELYAPVSGKVVAVNEELSDQPELVNESPYEGAWMVKVELSDASQVEKLLTAEKYAEMT 124
>sp|Q72Y91|GCSH_BACC1 Glycine cleavage system H protein OS=Bacillus cereus (strain ATCC
10987) GN=gcvH PE=3 SV=1
Length = 127
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 66/119 (55%), Positives = 90/119 (75%)
Query: 3 DLKYADSHEWVKVDGNSATIGITDHAQDHLGDVVYVELPEVGVTVKQDASFGAVESVKAT 62
+L+Y++ HEWVK +GN IGIT AQ LGD+V+VELPEVG T++ D FG+VESVK
Sbjct: 6 NLRYSEEHEWVKTEGNEVVIGITHFAQSELGDIVFVELPEVGATIEADEPFGSVESVKTV 65
Query: 63 SDVNSPVSGKVVEVNEELSSSPALVNSSPYEDGWIIKVEMDNAGELKKLMDADQYTKFC 121
S++ +PVSGKVV VNEELS P LVN SPYE W++KVE+ +A +++KL+ A++Y +
Sbjct: 66 SELYAPVSGKVVAVNEELSDQPELVNESPYEGAWMVKVELSDASQVEKLLTAEKYAEMT 124
>sp|O32174|GCSH_BACSU Glycine cleavage system H protein OS=Bacillus subtilis (strain 168)
GN=gcvH PE=1 SV=1
Length = 127
Score = 146 bits (369), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 69/122 (56%), Positives = 89/122 (72%)
Query: 2 KDLKYADSHEWVKVDGNSATIGITDHAQDHLGDVVYVELPEVGVTVKQDASFGAVESVKA 61
KDL+Y+ HEWVKV+G A IGIT AQ LGD+V+VELPEVG +K D FG+VESVK
Sbjct: 5 KDLRYSGEHEWVKVEGEKARIGITHFAQSELGDIVFVELPEVGAEIKADEPFGSVESVKT 64
Query: 62 TSDVNSPVSGKVVEVNEELSSSPALVNSSPYEDGWIIKVEMDNAGELKKLMDADQYTKFC 121
S++ +P++G VVEVNE+L SP VN SPYE W+I VE +A E++KLM A+QY +
Sbjct: 65 VSELYAPINGTVVEVNEDLDDSPEFVNESPYEKAWMIVVEPSDASEIEKLMTAEQYEEMT 124
Query: 122 EE 123
+E
Sbjct: 125 QE 126
>sp|B7INR1|GCSH_BACC2 Glycine cleavage system H protein OS=Bacillus cereus (strain G9842)
GN=gcvH PE=3 SV=1
Length = 127
Score = 146 bits (369), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 66/119 (55%), Positives = 90/119 (75%)
Query: 3 DLKYADSHEWVKVDGNSATIGITDHAQDHLGDVVYVELPEVGVTVKQDASFGAVESVKAT 62
+L+Y++ HEWVK +GN IGIT AQ LGD+V+VELPEVG T++ D FG+VESVK
Sbjct: 6 NLRYSEEHEWVKTEGNEVVIGITHFAQGELGDIVFVELPEVGATIEADEPFGSVESVKTV 65
Query: 63 SDVNSPVSGKVVEVNEELSSSPALVNSSPYEDGWIIKVEMDNAGELKKLMDADQYTKFC 121
S++ +PVSGKVV VNEELS P LVN SPYE W++KVE+ +A +++KL+ A++Y +
Sbjct: 66 SELYAPVSGKVVAVNEELSDQPELVNESPYEGAWMVKVELSDASQVEKLLTAEKYAEMT 124
>sp|A7GUH9|GCSH_BACCN Glycine cleavage system H protein OS=Bacillus cereus subsp.
cytotoxis (strain NVH 391-98) GN=gcvH PE=3 SV=1
Length = 127
Score = 145 bits (367), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 66/118 (55%), Positives = 89/118 (75%)
Query: 4 LKYADSHEWVKVDGNSATIGITDHAQDHLGDVVYVELPEVGVTVKQDASFGAVESVKATS 63
L+Y++ HEWVK +GN IGIT AQ LGD+V+VELPEVG T++ + FG+VESVK S
Sbjct: 7 LRYSEEHEWVKTEGNQVVIGITHFAQSELGDIVFVELPEVGATLEANEPFGSVESVKTVS 66
Query: 64 DVNSPVSGKVVEVNEELSSSPALVNSSPYEDGWIIKVEMDNAGELKKLMDADQYTKFC 121
++ +PVSGKVV VNEELS P LVN SPYE W++KVE+ +A E++KL+ A++Y +
Sbjct: 67 ELYAPVSGKVVAVNEELSDQPELVNESPYEGAWMVKVELSDASEVEKLLTAEKYAEMT 124
>sp|Q815Y3|GCSH_BACCR Glycine cleavage system H protein OS=Bacillus cereus (strain ATCC
14579 / DSM 31) GN=gcvH PE=3 SV=1
Length = 127
Score = 145 bits (366), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 65/119 (54%), Positives = 90/119 (75%)
Query: 3 DLKYADSHEWVKVDGNSATIGITDHAQDHLGDVVYVELPEVGVTVKQDASFGAVESVKAT 62
+L+Y++ HEWVK +GN IGIT AQ LGD+V+VELPEVG T++ + FG+VESVK
Sbjct: 6 NLRYSEEHEWVKTEGNEVVIGITHFAQGELGDIVFVELPEVGATIEANEPFGSVESVKTV 65
Query: 63 SDVNSPVSGKVVEVNEELSSSPALVNSSPYEDGWIIKVEMDNAGELKKLMDADQYTKFC 121
S++ +PVSGKVV VNEELS P LVN SPYE W++KVE+ +A +++KL+ A++Y +
Sbjct: 66 SELYAPVSGKVVAVNEELSDQPELVNESPYEGAWMVKVELSDASQVEKLLTAEKYAEMT 124
>sp|B7HD14|GCSH_BACC4 Glycine cleavage system H protein OS=Bacillus cereus (strain B4264)
GN=gcvH PE=3 SV=1
Length = 127
Score = 145 bits (366), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 65/119 (54%), Positives = 90/119 (75%)
Query: 3 DLKYADSHEWVKVDGNSATIGITDHAQDHLGDVVYVELPEVGVTVKQDASFGAVESVKAT 62
+L+Y++ HEWVK +GN IGIT AQ LGD+V+VELPEVG T++ + FG+VESVK
Sbjct: 6 NLRYSEEHEWVKTEGNEVVIGITHFAQGELGDIVFVELPEVGATIEANEPFGSVESVKTV 65
Query: 63 SDVNSPVSGKVVEVNEELSSSPALVNSSPYEDGWIIKVEMDNAGELKKLMDADQYTKFC 121
S++ +PVSGKVV VNEELS P LVN SPYE W++KVE+ +A +++KL+ A++Y +
Sbjct: 66 SELYAPVSGKVVAVNEELSDQPELVNESPYEGAWMVKVELSDASQVEKLLTAEKYAEMT 124
>sp|Q9K786|GCSH_BACHD Glycine cleavage system H protein OS=Bacillus halodurans (strain
ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125)
GN=gcvH PE=3 SV=1
Length = 128
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 70/122 (57%), Positives = 91/122 (74%)
Query: 3 DLKYADSHEWVKVDGNSATIGITDHAQDHLGDVVYVELPEVGVTVKQDASFGAVESVKAT 62
+LKY++ HEWVKV+G+ IGITD AQ LGD+V+VELPEVG V+ D FG+VESVK
Sbjct: 7 ELKYSEEHEWVKVEGDKVRIGITDFAQSELGDIVFVELPEVGDEVEADEPFGSVESVKTV 66
Query: 63 SDVNSPVSGKVVEVNEELSSSPALVNSSPYEDGWIIKVEMDNAGELKKLMDADQYTKFCE 122
S++ +PVSGKVVEVNEEL +P VN SPYE W+I VE +A ++++LM AD+Y +
Sbjct: 67 SELYAPVSGKVVEVNEELDDNPEYVNESPYEKAWMIVVEPSDASQVEELMSADEYKEMIS 126
Query: 123 EE 124
EE
Sbjct: 127 EE 128
>sp|Q49W45|GCSH_STAS1 Glycine cleavage system H protein OS=Staphylococcus saprophyticus
subsp. saprophyticus (strain ATCC 15305 / DSM 20229)
GN=gcvH PE=3 SV=1
Length = 126
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 66/121 (54%), Positives = 92/121 (76%)
Query: 3 DLKYADSHEWVKVDGNSATIGITDHAQDHLGDVVYVELPEVGVTVKQDASFGAVESVKAT 62
+LKY+ HEWVKV+GN+ TIGIT++AQ LGD+V+VELPEV + + +FG+VESVK
Sbjct: 6 ELKYSKEHEWVKVEGNTVTIGITEYAQGELGDIVFVELPEVDDEINEGDTFGSVESVKTV 65
Query: 63 SDVNSPVSGKVVEVNEELSSSPALVNSSPYEDGWIIKVEMDNAGELKKLMDADQYTKFCE 122
S++ +PVSGKV+E NEEL SP VN SPYE W++KVE+ + +L++LM A+QY++
Sbjct: 66 SELYAPVSGKVLESNEELEDSPEFVNESPYEKAWMVKVELSDESQLEELMSAEQYSEMIG 125
Query: 123 E 123
E
Sbjct: 126 E 126
>sp|Q0VLA7|GCSH_ALCBS Glycine cleavage system H protein OS=Alcanivorax borkumensis
(strain SK2 / ATCC 700651 / DSM 11573) GN=gcvH PE=3 SV=1
Length = 128
Score = 143 bits (360), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 69/122 (56%), Positives = 87/122 (71%)
Query: 3 DLKYADSHEWVKVDGNSATIGITDHAQDHLGDVVYVELPEVGVTVKQDASFGAVESVKAT 62
+L+YA SHEW KV+ AT+GI+DHAQD +GD+VYVELPEVG V G VESVKA
Sbjct: 7 ELRYASSHEWAKVEDGVATVGISDHAQDAMGDLVYVELPEVGQVVAAGDETGVVESVKAA 66
Query: 63 SDVNSPVSGKVVEVNEELSSSPALVNSSPYEDGWIIKVEMDNAGELKKLMDADQYTKFCE 122
SD+ SPVSG++VE+NE L P LVN+ PYE GW+ KV++ + GEL L+ ADQY +
Sbjct: 67 SDIYSPVSGEIVEINEALEDEPELVNNVPYEGGWLFKVQLTDEGELDSLLTADQYQAQID 126
Query: 123 EE 124
E
Sbjct: 127 SE 128
>sp|Q65F75|GCSH_BACLD Glycine cleavage system H protein OS=Bacillus licheniformis (strain
DSM 13 / ATCC 14580) GN=gcvH PE=3 SV=1
Length = 127
Score = 142 bits (359), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 67/122 (54%), Positives = 88/122 (72%)
Query: 2 KDLKYADSHEWVKVDGNSATIGITDHAQDHLGDVVYVELPEVGVTVKQDASFGAVESVKA 61
K+L+Y++ HEWVK +G+ IGITD AQ LGD+V+VELPEVG +K D FG+VESVK
Sbjct: 5 KELRYSEEHEWVKTEGDKVRIGITDFAQSELGDIVFVELPEVGDEIKADEPFGSVESVKT 64
Query: 62 TSDVNSPVSGKVVEVNEELSSSPALVNSSPYEDGWIIKVEMDNAGELKKLMDADQYTKFC 121
S++ +P++GKVVEVNE+L SP VN SPYE W+I VE +A E++ LM A QY
Sbjct: 65 VSELYAPINGKVVEVNEDLEDSPEFVNESPYEKAWMIVVEPSDASEIENLMTAGQYEDMI 124
Query: 122 EE 123
+E
Sbjct: 125 KE 126
>sp|Q2YWP4|GCSH_STAAB Glycine cleavage system H protein OS=Staphylococcus aureus (strain
bovine RF122 / ET3-1) GN=gcvH PE=3 SV=1
Length = 126
Score = 142 bits (358), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 65/121 (53%), Positives = 92/121 (76%)
Query: 3 DLKYADSHEWVKVDGNSATIGITDHAQDHLGDVVYVELPEVGVTVKQDASFGAVESVKAT 62
+LKY++ HEWVKV+GN ATIGIT++AQ LGD+V+VELPE + + +FG+VESVK
Sbjct: 6 ELKYSNEHEWVKVEGNVATIGITEYAQSELGDIVFVELPETDDEINEGDTFGSVESVKTV 65
Query: 63 SDVNSPVSGKVVEVNEELSSSPALVNSSPYEDGWIIKVEMDNAGELKKLMDADQYTKFCE 122
S++ +P+SGKVVEVNEEL SP VN SPYE W++KVE+ + +L+ L+ A++Y++
Sbjct: 66 SELYAPISGKVVEVNEELEDSPEFVNESPYEKAWMVKVEISDESQLEALLTAEKYSEMIG 125
Query: 123 E 123
E
Sbjct: 126 E 126
>sp|Q4L4R5|GCSH_STAHJ Glycine cleavage system H protein OS=Staphylococcus haemolyticus
(strain JCSC1435) GN=gcvH PE=3 SV=1
Length = 126
Score = 142 bits (357), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 67/121 (55%), Positives = 89/121 (73%)
Query: 3 DLKYADSHEWVKVDGNSATIGITDHAQDHLGDVVYVELPEVGVTVKQDASFGAVESVKAT 62
+LKY+ HEWVKV+GN+ TIGIT++AQ LGD+V+VELPEV + + +FG+VESVK
Sbjct: 6 ELKYSKEHEWVKVEGNTVTIGITEYAQGELGDIVFVELPEVDDEINEGDTFGSVESVKTV 65
Query: 63 SDVNSPVSGKVVEVNEELSSSPALVNSSPYEDGWIIKVEMDNAGELKKLMDADQYTKFCE 122
S++ +PVSGKVVE NEEL SP VN SPYE W++KVE+ + +L L+ ADQY +
Sbjct: 66 SELYAPVSGKVVESNEELEDSPEFVNESPYEKAWMVKVELSDESQLDDLLSADQYKEMIG 125
Query: 123 E 123
E
Sbjct: 126 E 126
>sp|Q6GII3|GCSH_STAAR Glycine cleavage system H protein OS=Staphylococcus aureus (strain
MRSA252) GN=gcvH PE=3 SV=1
Length = 126
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 65/121 (53%), Positives = 91/121 (75%)
Query: 3 DLKYADSHEWVKVDGNSATIGITDHAQDHLGDVVYVELPEVGVTVKQDASFGAVESVKAT 62
+LKY+ HEWVKV+GN ATIGIT++AQ LGD+V+VELPE + + +FG+VESVK
Sbjct: 6 ELKYSKEHEWVKVEGNVATIGITEYAQSELGDIVFVELPETDDEINEGDTFGSVESVKTV 65
Query: 63 SDVNSPVSGKVVEVNEELSSSPALVNSSPYEDGWIIKVEMDNAGELKKLMDADQYTKFCE 122
S++ +P+SGKVVEVNEEL SP VN SPYE W++KVE+ + +L+ L+ A++Y++
Sbjct: 66 SELYAPISGKVVEVNEELEDSPEFVNESPYEKAWMVKVEISDESQLEALLTAEKYSEMIG 125
Query: 123 E 123
E
Sbjct: 126 E 126
>sp|P64214|GCSH_STAAN Glycine cleavage system H protein OS=Staphylococcus aureus (strain
N315) GN=gcvH PE=1 SV=1
Length = 126
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 65/121 (53%), Positives = 91/121 (75%)
Query: 3 DLKYADSHEWVKVDGNSATIGITDHAQDHLGDVVYVELPEVGVTVKQDASFGAVESVKAT 62
+LKY+ HEWVKV+GN ATIGIT++AQ LGD+V+VELPE + + +FG+VESVK
Sbjct: 6 ELKYSKEHEWVKVEGNVATIGITEYAQSELGDIVFVELPETDDEINEGDTFGSVESVKTV 65
Query: 63 SDVNSPVSGKVVEVNEELSSSPALVNSSPYEDGWIIKVEMDNAGELKKLMDADQYTKFCE 122
S++ +P+SGKVVEVNEEL SP VN SPYE W++KVE+ + +L+ L+ A++Y++
Sbjct: 66 SELYAPISGKVVEVNEELEDSPEFVNESPYEKAWMVKVEISDESQLEALLTAEKYSEMIG 125
Query: 123 E 123
E
Sbjct: 126 E 126
>sp|P64213|GCSH_STAAM Glycine cleavage system H protein OS=Staphylococcus aureus (strain
Mu50 / ATCC 700699) GN=gcvH PE=3 SV=1
Length = 126
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 65/121 (53%), Positives = 91/121 (75%)
Query: 3 DLKYADSHEWVKVDGNSATIGITDHAQDHLGDVVYVELPEVGVTVKQDASFGAVESVKAT 62
+LKY+ HEWVKV+GN ATIGIT++AQ LGD+V+VELPE + + +FG+VESVK
Sbjct: 6 ELKYSKEHEWVKVEGNVATIGITEYAQSELGDIVFVELPETDDEINEGDTFGSVESVKTV 65
Query: 63 SDVNSPVSGKVVEVNEELSSSPALVNSSPYEDGWIIKVEMDNAGELKKLMDADQYTKFCE 122
S++ +P+SGKVVEVNEEL SP VN SPYE W++KVE+ + +L+ L+ A++Y++
Sbjct: 66 SELYAPISGKVVEVNEELEDSPEFVNESPYEKAWMVKVEISDESQLEALLTAEKYSEMIG 125
Query: 123 E 123
E
Sbjct: 126 E 126
>sp|A5IR11|GCSH_STAA9 Glycine cleavage system H protein OS=Staphylococcus aureus (strain
JH9) GN=gcvH PE=3 SV=1
Length = 126
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 65/121 (53%), Positives = 91/121 (75%)
Query: 3 DLKYADSHEWVKVDGNSATIGITDHAQDHLGDVVYVELPEVGVTVKQDASFGAVESVKAT 62
+LKY+ HEWVKV+GN ATIGIT++AQ LGD+V+VELPE + + +FG+VESVK
Sbjct: 6 ELKYSKEHEWVKVEGNVATIGITEYAQSELGDIVFVELPETDDEINEGDTFGSVESVKTV 65
Query: 63 SDVNSPVSGKVVEVNEELSSSPALVNSSPYEDGWIIKVEMDNAGELKKLMDADQYTKFCE 122
S++ +P+SGKVVEVNEEL SP VN SPYE W++KVE+ + +L+ L+ A++Y++
Sbjct: 66 SELYAPISGKVVEVNEELEDSPEFVNESPYEKAWMVKVEISDESQLEALLTAEKYSEMIG 125
Query: 123 E 123
E
Sbjct: 126 E 126
>sp|A6TZT7|GCSH_STAA2 Glycine cleavage system H protein OS=Staphylococcus aureus (strain
JH1) GN=gcvH PE=3 SV=1
Length = 126
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 65/121 (53%), Positives = 91/121 (75%)
Query: 3 DLKYADSHEWVKVDGNSATIGITDHAQDHLGDVVYVELPEVGVTVKQDASFGAVESVKAT 62
+LKY+ HEWVKV+GN ATIGIT++AQ LGD+V+VELPE + + +FG+VESVK
Sbjct: 6 ELKYSKEHEWVKVEGNVATIGITEYAQSELGDIVFVELPETDDEINEGDTFGSVESVKTV 65
Query: 63 SDVNSPVSGKVVEVNEELSSSPALVNSSPYEDGWIIKVEMDNAGELKKLMDADQYTKFCE 122
S++ +P+SGKVVEVNEEL SP VN SPYE W++KVE+ + +L+ L+ A++Y++
Sbjct: 66 SELYAPISGKVVEVNEELEDSPEFVNESPYEKAWMVKVEISDESQLEALLTAEKYSEMIG 125
Query: 123 E 123
E
Sbjct: 126 E 126
>sp|A7X019|GCSH_STAA1 Glycine cleavage system H protein OS=Staphylococcus aureus (strain
Mu3 / ATCC 700698) GN=gcvH PE=3 SV=1
Length = 126
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 65/121 (53%), Positives = 91/121 (75%)
Query: 3 DLKYADSHEWVKVDGNSATIGITDHAQDHLGDVVYVELPEVGVTVKQDASFGAVESVKAT 62
+LKY+ HEWVKV+GN ATIGIT++AQ LGD+V+VELPE + + +FG+VESVK
Sbjct: 6 ELKYSKEHEWVKVEGNVATIGITEYAQSELGDIVFVELPETDDEINEGDTFGSVESVKTV 65
Query: 63 SDVNSPVSGKVVEVNEELSSSPALVNSSPYEDGWIIKVEMDNAGELKKLMDADQYTKFCE 122
S++ +P+SGKVVEVNEEL SP VN SPYE W++KVE+ + +L+ L+ A++Y++
Sbjct: 66 SELYAPISGKVVEVNEELEDSPEFVNESPYEKAWMVKVEISDESQLEALLTAEKYSEMIG 125
Query: 123 E 123
E
Sbjct: 126 E 126
>sp|Q8NXH7|GCSH_STAAW Glycine cleavage system H protein OS=Staphylococcus aureus (strain
MW2) GN=gcvH PE=3 SV=1
Length = 126
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 64/121 (52%), Positives = 91/121 (75%)
Query: 3 DLKYADSHEWVKVDGNSATIGITDHAQDHLGDVVYVELPEVGVTVKQDASFGAVESVKAT 62
+LKY+ HEWVKV+GN ATIGIT++AQ LGD+V+VELPE + + +FG+VESVK
Sbjct: 6 ELKYSKEHEWVKVEGNVATIGITEYAQSELGDIVFVELPETDDEINEGDTFGSVESVKTV 65
Query: 63 SDVNSPVSGKVVEVNEELSSSPALVNSSPYEDGWIIKVEMDNAGELKKLMDADQYTKFCE 122
S++ +P+SGKVVEVNEEL SP VN SPYE W++KVE+ + +++ L+ A++Y++
Sbjct: 66 SELYAPISGKVVEVNEELEDSPEFVNESPYEKAWMVKVEISDESQIEALLTAEKYSEMIG 125
Query: 123 E 123
E
Sbjct: 126 E 126
>sp|Q6GB23|GCSH_STAAS Glycine cleavage system H protein OS=Staphylococcus aureus (strain
MSSA476) GN=gcvH PE=3 SV=1
Length = 126
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 64/121 (52%), Positives = 91/121 (75%)
Query: 3 DLKYADSHEWVKVDGNSATIGITDHAQDHLGDVVYVELPEVGVTVKQDASFGAVESVKAT 62
+LKY+ HEWVKV+GN ATIGIT++AQ LGD+V+VELPE + + +FG+VESVK
Sbjct: 6 ELKYSKEHEWVKVEGNVATIGITEYAQSELGDIVFVELPETDDEINEGDTFGSVESVKTV 65
Query: 63 SDVNSPVSGKVVEVNEELSSSPALVNSSPYEDGWIIKVEMDNAGELKKLMDADQYTKFCE 122
S++ +P+SGKVVEVNEEL SP VN SPYE W++KVE+ + +++ L+ A++Y++
Sbjct: 66 SELYAPISGKVVEVNEELEDSPEFVNESPYEKAWMVKVEISDESQIEALLTAEKYSEMIG 125
Query: 123 E 123
E
Sbjct: 126 E 126
>sp|A4SP34|GCSH_AERS4 Glycine cleavage system H protein OS=Aeromonas salmonicida (strain
A449) GN=gcvH PE=3 SV=1
Length = 129
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 66/123 (53%), Positives = 89/123 (72%), Gaps = 1/123 (0%)
Query: 3 DLKYADSHEWVKVDGNS-ATIGITDHAQDHLGDVVYVELPEVGVTVKQDASFGAVESVKA 61
+LKYA SHEW++V+ N A +GIT+HAQD LGD+V+V+LPEVG + ESVKA
Sbjct: 7 ELKYATSHEWIRVEANGEAVVGITEHAQDLLGDMVFVDLPEVGKQIGAGDDCAVAESVKA 66
Query: 62 TSDVNSPVSGKVVEVNEELSSSPALVNSSPYEDGWIIKVEMDNAGELKKLMDADQYTKFC 121
SD+ SPVSG++V +NEEL SP LVNS PY GW+ ++++D+AGEL L+DA+ Y
Sbjct: 67 ASDIYSPVSGEIVAINEELEGSPELVNSDPYGAGWLFRIKLDDAGELANLLDAEGYQNLV 126
Query: 122 EEE 124
+EE
Sbjct: 127 DEE 129
>sp|Q5HQR3|GCSH_STAEQ Glycine cleavage system H protein OS=Staphylococcus epidermidis
(strain ATCC 35984 / RP62A) GN=gcvH PE=3 SV=1
Length = 126
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 62/121 (51%), Positives = 91/121 (75%)
Query: 3 DLKYADSHEWVKVDGNSATIGITDHAQDHLGDVVYVELPEVGVTVKQDASFGAVESVKAT 62
+ KY+ HEWVK++ N ATIGIT++AQ+ LGD+V+VELPE + + +FG+VESVK
Sbjct: 6 EFKYSKEHEWVKIENNVATIGITEYAQNELGDIVFVELPETDDELNEGDTFGSVESVKTV 65
Query: 63 SDVNSPVSGKVVEVNEELSSSPALVNSSPYEDGWIIKVEMDNAGELKKLMDADQYTKFCE 122
S++ +P+SGK+VEVNEEL SP VN SPYE W++K+E+ + +L++L+ ADQY++
Sbjct: 66 SELYAPISGKIVEVNEELEDSPEFVNESPYEKAWMVKIEISDDSQLEELLSADQYSEMIG 125
Query: 123 E 123
E
Sbjct: 126 E 126
>sp|B9DJH3|GCSH_STACT Glycine cleavage system H protein OS=Staphylococcus carnosus
(strain TM300) GN=gcvH PE=3 SV=1
Length = 126
Score = 139 bits (351), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 64/122 (52%), Positives = 91/122 (74%)
Query: 2 KDLKYADSHEWVKVDGNSATIGITDHAQDHLGDVVYVELPEVGVTVKQDASFGAVESVKA 61
++LKY+ HEWVKV+G++ TIGIT++AQ LGD+V+VELPE +++ SFG+VESVK
Sbjct: 5 EELKYSKEHEWVKVEGDTVTIGITEYAQGELGDIVFVELPETEDDIEESESFGSVESVKT 64
Query: 62 TSDVNSPVSGKVVEVNEELSSSPALVNSSPYEDGWIIKVEMDNAGELKKLMDADQYTKFC 121
S++ +PVSG VVE+NEEL SP VN SPYE W++KV++++ +L L+ ADQY +
Sbjct: 65 VSELYAPVSGSVVEINEELEDSPEFVNESPYEKAWMVKVKLNDESQLDDLLSADQYKEMI 124
Query: 122 EE 123
E
Sbjct: 125 GE 126
>sp|B4UGZ2|GCSH_ANASK Glycine cleavage system H protein OS=Anaeromyxobacter sp. (strain
K) GN=gcvH PE=3 SV=1
Length = 128
Score = 139 bits (351), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 64/124 (51%), Positives = 88/124 (70%)
Query: 2 KDLKYADSHEWVKVDGNSATIGITDHAQDHLGDVVYVELPEVGVTVKQDASFGAVESVKA 61
+DL+Y HEW + G++ +GITD AQ LGDVVYVELP+VG VK+ SFG VES KA
Sbjct: 5 EDLRYTREHEWARRKGSAIVVGITDFAQQQLGDVVYVELPDVGDPVKKGESFGVVESTKA 64
Query: 62 TSDVNSPVSGKVVEVNEELSSSPALVNSSPYEDGWIIKVEMDNAGELKKLMDADQYTKFC 121
S++ +P+SGKV+EVN+ LS +P +N PYE+GW+I +E + +L+ LMDA Y F
Sbjct: 65 VSELFAPISGKVIEVNDPLSDAPETINEDPYEEGWMITIEPSDPKDLEALMDAAAYKAFV 124
Query: 122 EEED 125
EE++
Sbjct: 125 EEQE 128
>sp|B8JDY7|GCSH_ANAD2 Glycine cleavage system H protein OS=Anaeromyxobacter dehalogenans
(strain 2CP-1 / ATCC BAA-258) GN=gcvH PE=3 SV=1
Length = 128
Score = 139 bits (351), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 64/124 (51%), Positives = 88/124 (70%)
Query: 2 KDLKYADSHEWVKVDGNSATIGITDHAQDHLGDVVYVELPEVGVTVKQDASFGAVESVKA 61
+DL+Y HEW + G++ +GITD AQ LGDVVYVELP+VG VK+ SFG VES KA
Sbjct: 5 EDLRYTREHEWARRKGSAIVVGITDFAQQQLGDVVYVELPDVGDPVKKGESFGVVESTKA 64
Query: 62 TSDVNSPVSGKVVEVNEELSSSPALVNSSPYEDGWIIKVEMDNAGELKKLMDADQYTKFC 121
S++ +P+SGKV+EVN+ LS +P +N PYE+GW+I +E + +L+ LMDA Y F
Sbjct: 65 VSELFAPISGKVIEVNDPLSDAPETINEDPYEEGWMITIEPSDPKDLEALMDAAAYKAFV 124
Query: 122 EEED 125
EE++
Sbjct: 125 EEQE 128
>sp|C5D7J9|GCSH_GEOSW Glycine cleavage system H protein OS=Geobacillus sp. (strain WCH70)
GN=gcvH PE=3 SV=1
Length = 127
Score = 139 bits (351), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 64/122 (52%), Positives = 89/122 (72%)
Query: 2 KDLKYADSHEWVKVDGNSATIGITDHAQDHLGDVVYVELPEVGVTVKQDASFGAVESVKA 61
K+L+Y++ HEWV+V+G+ IGITD AQ LGD+V+VELPEVG + + FG+VESVK
Sbjct: 5 KELRYSEEHEWVRVEGDKVRIGITDFAQSELGDIVFVELPEVGAEITANEPFGSVESVKT 64
Query: 62 TSDVNSPVSGKVVEVNEELSSSPALVNSSPYEDGWIIKVEMDNAGELKKLMDADQYTKFC 121
S++ +P+SGKVVEVNEEL+ +P VN SPYE W+I VE + E+ L+ A+QY +
Sbjct: 65 VSELYAPISGKVVEVNEELNDNPEYVNESPYEKAWMIVVEPYDMSEIDNLLTAEQYEEMV 124
Query: 122 EE 123
+E
Sbjct: 125 KE 126
>sp|Q7MEH8|GCSH_VIBVY Glycine cleavage system H protein OS=Vibrio vulnificus (strain
YJ016) GN=gcvH PE=3 SV=1
Length = 126
Score = 139 bits (350), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 68/123 (55%), Positives = 92/123 (74%), Gaps = 1/123 (0%)
Query: 2 KDLKYADSHEWVKVDGN-SATIGITDHAQDHLGDVVYVELPEVGVTVKQDASFGAVESVK 60
K LK+ +SHEWV+ +G+ + TIGI++HAQ+ LGDVV+VELPE+ ++ SF VESVK
Sbjct: 3 KTLKFTESHEWVRDNGDGTVTIGISEHAQEMLGDVVFVELPELEAEIEAGESFSLVESVK 62
Query: 61 ATSDVNSPVSGKVVEVNEELSSSPALVNSSPYEDGWIIKVEMDNAGELKKLMDADQYTKF 120
A SD+ +PV+G+VVEVNEELS SP L+N PYE GWI+KV++ + EL L DA++Y
Sbjct: 63 AASDIYAPVTGEVVEVNEELSDSPELINEEPYEGGWIVKVKLSDPSELDNLKDAEEYLNS 122
Query: 121 CEE 123
EE
Sbjct: 123 IEE 125
>sp|Q8D7G6|GCSH_VIBVU Glycine cleavage system H protein OS=Vibrio vulnificus (strain
CMCP6) GN=gcvH PE=3 SV=1
Length = 126
Score = 139 bits (350), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 68/123 (55%), Positives = 92/123 (74%), Gaps = 1/123 (0%)
Query: 2 KDLKYADSHEWVKVDGN-SATIGITDHAQDHLGDVVYVELPEVGVTVKQDASFGAVESVK 60
K LK+ +SHEWV+ +G+ + TIGI++HAQ+ LGDVV+VELPE+ ++ SF VESVK
Sbjct: 3 KTLKFTESHEWVRDNGDGTVTIGISEHAQEMLGDVVFVELPELEAEIEAGESFSLVESVK 62
Query: 61 ATSDVNSPVSGKVVEVNEELSSSPALVNSSPYEDGWIIKVEMDNAGELKKLMDADQYTKF 120
A SD+ +PV+G+VVEVNEELS SP L+N PYE GWI+KV++ + EL L DA++Y
Sbjct: 63 AASDIYAPVTGEVVEVNEELSDSPELINEEPYEGGWIVKVKLSDPSELDNLKDAEEYLNS 122
Query: 121 CEE 123
EE
Sbjct: 123 IEE 125
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.307 0.127 0.357
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 49,300,156
Number of Sequences: 539616
Number of extensions: 1896414
Number of successful extensions: 4811
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 486
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 4041
Number of HSP's gapped (non-prelim): 509
length of query: 128
length of database: 191,569,459
effective HSP length: 94
effective length of query: 34
effective length of database: 140,845,555
effective search space: 4788748870
effective search space used: 4788748870
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 55 (25.8 bits)