Query 044123
Match_columns 148
No_of_seqs 128 out of 1190
Neff 9.3
Searched_HMMs 29240
Date Mon Mar 25 20:23:26 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/044123.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/044123hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3htm_A Speckle-type POZ protei 100.0 2E-28 6.8E-33 169.3 8.6 121 3-137 51-172 (172)
2 3hve_A Gigaxonin; ubiquitin, c 99.9 1.8E-28 6.1E-33 179.6 7.3 128 3-144 48-178 (256)
3 3i3n_A Kelch-like protein 11; 99.9 1.7E-28 5.8E-33 181.8 4.0 128 3-144 52-186 (279)
4 3hqi_A Speckle-type POZ protei 99.9 5.6E-27 1.9E-31 175.9 9.3 121 3-137 191-312 (312)
5 4eoz_A Speckle-type POZ protei 99.9 8.4E-25 2.9E-29 147.1 1.7 103 3-119 42-145 (145)
6 2vkp_A BTB/POZ domain-containi 99.8 3.9E-21 1.3E-25 123.4 4.3 80 3-89 29-109 (109)
7 2if5_A Zinc finger and BTB dom 99.8 8.8E-21 3E-25 123.8 4.7 77 3-85 42-119 (120)
8 2z8h_A Transcription regulator 99.8 1.5E-20 5E-25 125.8 3.5 83 3-93 53-137 (138)
9 1r29_A B-cell lymphoma 6 prote 99.8 2.7E-20 9.1E-25 122.7 4.5 78 3-87 46-125 (127)
10 2ppi_A Gigaxonin; BTB domain, 99.8 2.5E-20 8.6E-25 125.6 4.3 80 3-86 64-144 (144)
11 3b84_A Zinc finger and BTB dom 99.8 8.1E-20 2.8E-24 119.2 4.3 76 3-88 41-117 (119)
12 2yy9_A Zinc finger and BTB dom 99.8 8.2E-20 2.8E-24 121.7 3.6 81 3-93 42-123 (135)
13 1buo_A POZ domain, protein (pr 99.8 4.1E-19 1.4E-23 116.2 4.7 75 3-88 45-120 (121)
14 2vpk_A Myoneurin; transcriptio 99.8 4.8E-19 1.7E-23 114.9 4.8 74 3-86 39-115 (116)
15 2q81_A MIZ-1 protein; BTB/POZ 99.7 1.6E-18 5.6E-23 113.0 3.4 73 3-86 44-117 (119)
16 3ohu_A Transcription regulator 99.7 1.8E-19 6E-24 118.5 -2.7 75 3-85 49-125 (125)
17 2ihc_A Transcription regulator 99.7 1.8E-19 6.1E-24 118.4 -2.7 76 3-86 46-123 (124)
18 3ga1_A Nucleus accumbens-assoc 99.7 7.2E-19 2.5E-23 116.2 -2.1 76 3-88 50-127 (129)
19 3m5b_A Zinc finger and BTB dom 99.6 5.5E-17 1.9E-21 105.8 1.5 71 3-87 47-117 (119)
20 3fkc_A Transcriptional regulat 99.6 3.7E-16 1.3E-20 101.4 4.2 66 3-79 48-115 (116)
21 2ast_A S-phase kinase-associat 99.5 3E-13 1E-17 92.3 8.4 82 6-93 20-130 (159)
22 1fs1_B SKP1, cyclin A/CDK2-ass 99.1 6.2E-10 2.1E-14 74.3 7.8 78 6-93 21-125 (141)
23 4ajy_C Transcription elongatio 99.0 1.9E-10 6.6E-15 72.0 4.6 62 6-73 21-96 (97)
24 2p1m_A SKP1-like protein 1A; F 98.9 6.5E-10 2.2E-14 75.7 3.1 96 6-113 23-144 (160)
25 2eqx_A Kelch repeat and BTB do 98.7 1E-08 3.4E-13 65.0 4.3 52 85-144 4-55 (105)
26 3v7d_A Suppressor of kinetocho 98.4 1.9E-06 6.4E-11 59.0 7.8 84 6-93 26-137 (169)
27 1hv2_A Elongin C, ELC1; protei 98.1 2.2E-06 7.7E-11 53.5 4.1 64 6-74 23-99 (99)
28 2fnj_C Transcription elongatio 98.1 1E-06 3.5E-11 54.8 2.1 65 6-74 20-96 (96)
29 1vcb_B Protein (elongin C); tu 97.7 1.7E-05 5.8E-10 50.6 2.8 66 5-74 35-112 (112)
30 3drz_A BTB/POZ domain-containi 97.7 9.4E-05 3.2E-09 46.7 5.7 74 10-87 30-106 (107)
31 3drx_A BTB/POZ domain-containi 96.3 0.0045 1.5E-07 43.2 4.2 75 10-88 36-113 (202)
32 2vkp_A BTB/POZ domain-containi 91.2 0.22 7.6E-06 30.4 3.6 27 102-128 82-108 (109)
33 1s1g_A Potassium voltage-gated 91.1 0.079 2.7E-06 34.0 1.4 51 27-81 53-104 (124)
34 2eqx_A Kelch repeat and BTB do 90.3 0.19 6.6E-06 30.9 2.7 72 58-130 9-84 (105)
35 1t1d_A Protein (potassium chan 87.0 0.27 9.2E-06 30.2 1.6 51 27-81 42-94 (100)
36 1r29_A B-cell lymphoma 6 prote 86.5 0.8 2.7E-05 28.7 3.8 27 102-128 100-126 (127)
37 1nn7_A Potassium channel KV4.2 85.6 0.081 2.8E-06 32.9 -1.3 47 33-82 45-92 (105)
38 2nz0_B Potassium voltage-gated 85.5 0.31 1E-05 31.9 1.4 47 27-77 75-121 (140)
39 3htm_A Speckle-type POZ protei 85.3 0.39 1.3E-05 31.7 1.9 33 58-90 133-165 (172)
40 2yy9_A Zinc finger and BTB dom 82.7 0.5 1.7E-05 30.2 1.5 36 89-132 87-122 (135)
41 2vpk_A Myoneurin; transcriptio 81.5 1.3 4.3E-05 27.3 3.0 25 102-126 91-115 (116)
42 2z8h_A Transcription regulator 81.3 0.42 1.4E-05 30.7 0.7 29 102-130 106-134 (138)
43 2q81_A MIZ-1 protein; BTB/POZ 81.3 1.7 5.8E-05 26.9 3.6 25 102-126 93-117 (119)
44 3b84_A Zinc finger and BTB dom 80.6 0.89 3E-05 28.3 2.1 27 102-128 91-117 (119)
45 3hqi_A Speckle-type POZ protei 79.7 0.77 2.6E-05 33.5 1.8 33 58-90 273-305 (312)
46 1buo_A POZ domain, protein (pr 77.8 2.1 7.3E-05 26.5 3.2 27 102-128 94-120 (121)
47 2if5_A Zinc finger and BTB dom 76.4 2.8 9.6E-05 25.8 3.5 24 102-125 96-119 (120)
48 3kvt_A Potassium channel prote 74.9 0.56 1.9E-05 29.6 -0.2 47 27-77 46-92 (115)
49 2ppi_A Gigaxonin; BTB domain, 69.9 2.1 7.3E-05 27.6 1.8 24 102-125 120-143 (144)
50 4eoz_A Speckle-type POZ protei 69.3 2.3 7.9E-05 27.0 1.8 28 102-129 96-123 (145)
51 3m5b_A Zinc finger and BTB dom 69.3 3.6 0.00012 25.6 2.7 26 102-127 92-117 (119)
52 2plx_B Peptide inhibitor; heli 67.8 6.7 0.00023 17.1 2.9 20 104-123 3-22 (26)
53 3i3n_A Kelch-like protein 11; 61.1 7.6 0.00026 27.7 3.4 27 102-128 112-138 (279)
54 3hve_A Gigaxonin; ubiquitin, c 59.0 7.6 0.00026 27.3 3.1 33 89-129 99-131 (256)
55 3ga1_A Nucleus accumbens-assoc 57.9 1.5 5E-05 27.6 -0.8 27 102-128 101-127 (129)
56 1fs1_B SKP1, cyclin A/CDK2-ass 51.6 20 0.0007 22.9 4.0 35 89-131 89-123 (141)
57 2ast_A S-phase kinase-associat 51.4 17 0.0006 23.7 3.7 29 102-130 99-127 (159)
58 2cmy_B Beta trypsin, veronica 42.9 19 0.00065 16.6 1.9 22 103-124 7-28 (34)
59 2p1m_A SKP1-like protein 1A; F 38.8 23 0.00078 23.2 2.7 34 89-130 93-126 (160)
60 3b0b_B CENP-S, centromere prot 36.0 20 0.0007 22.1 2.0 78 60-146 11-88 (107)
61 2r9r_B Paddle chimera voltage 34.9 24 0.00081 27.9 2.7 48 27-78 93-141 (514)
62 2rh3_A Protein VIRC2; ribbon-h 30.8 35 0.0012 21.0 2.3 40 107-146 20-59 (121)
63 4b8b_A General negative regula 27.9 89 0.003 25.3 4.8 47 102-148 533-581 (603)
64 4h63_H Mediator of RNA polymer 20.5 59 0.002 22.3 2.2 13 40-52 187-199 (200)
No 1
>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens}
Probab=99.95 E-value=2e-28 Score=169.26 Aligned_cols=121 Identities=26% Similarity=0.404 Sum_probs=109.8
Q ss_pred ceeecCCHHHHHhh-cCCCCCCCCCCCeeecccCCcHHHHHHHHHHHhCCCCCchhhHHHHHHHHHhccccchHHHHHHH
Q 044123 3 RIHAARSSILKDCL-DGKLLPISSTGGMTTMEVAEEGEVLKALVDFLYTGSLPREKLQKHVVGLFAAGDNYEIEYLREVC 81 (148)
Q Consensus 3 ~vLaa~S~~F~~~f-~~~~e~~~~~~~i~l~~~~~~~~~~~~~l~yiYtg~~~~~~~~~~~~~ll~~A~~~~i~~L~~~c 81 (148)
+||+++|+||++|| ++|+|+.. ..|.+++++ +++|+.+|+|+|||+++. +.+++.+++.+|++|+++.|++.|
T Consensus 51 ~iL~~~S~~F~~~f~~~~~e~~~--~~i~l~~~~--~~~f~~~l~~~Yt~~~~~--~~~~~~~ll~~A~~~~~~~l~~~c 124 (172)
T 3htm_A 51 AILAARSPVFSAMFEHEMEESKK--NRVEINDVE--PEVFKEMMCFIYTGKAPN--LDKMADDLLAAADKYALERLKVMC 124 (172)
T ss_dssp HHHHHHCHHHHHHHHSCCCGGGT--TEEEECSSC--HHHHHHHHHHHHHSCCTT--GGGTHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHcCHHHHHHHccCccccCC--CeEEecCCC--HHHHHHHHHHHhCCCCCC--cHHHHHHHHHHHHHhCcHHHHHHH
Confidence 58999999999999 99999987 889999999 999999999999999988 889999999999999999999999
Q ss_pred HhhhchhcccccccccchhhHHHHHHHhhcCChHHHHHHHHHHHHHchHHhhcchh
Q 044123 82 LHHMPASFQSSNARDFQSSNAIDFLRIGYNYQLDELRDAALNFIVKKVEELVFSDK 137 (148)
Q Consensus 82 ~~~l~~~l~~~n~~~~~~~~~~~~~~~a~~~~~~~L~~~~~~~i~~~~~~~~~~~~ 137 (148)
+++|.+.++.+| |+.++.+|..|+++.|++.|.+||.+||.++..+++
T Consensus 125 ~~~l~~~l~~~n--------~~~~~~~A~~~~~~~L~~~~~~~i~~~~~~v~~s~~ 172 (172)
T 3htm_A 125 EDALCSNLSVEN--------AAEILILADLHSADQLKTQAVDFINYHATDVLETSG 172 (172)
T ss_dssp HHHHHHTCCTTT--------HHHHHHHHHHTTCHHHHHHHHHHHHHTC--------
T ss_pred HHHHHHhCCHHH--------HHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHcCCC
Confidence 999999999999 999999999999999999999999999999988764
No 2
>3hve_A Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, disease mutation, kelch repeat, neurodegeneration, phosphoprotein, polymorphism, UBL conjugation; 2.80A {Homo sapiens} PDB: 3hve_B
Probab=99.95 E-value=1.8e-28 Score=179.55 Aligned_cols=128 Identities=14% Similarity=0.271 Sum_probs=114.9
Q ss_pred ceeecCCHHHHHhh-cCCC--CCCCCCCCeeecccCCcHHHHHHHHHHHhCCCCCchhhHHHHHHHHHhccccchHHHHH
Q 044123 3 RIHAARSSILKDCL-DGKL--LPISSTGGMTTMEVAEEGEVLKALVDFLYTGSLPREKLQKHVVGLFAAGDNYEIEYLRE 79 (148)
Q Consensus 3 ~vLaa~S~~F~~~f-~~~~--e~~~~~~~i~l~~~~~~~~~~~~~l~yiYtg~~~~~~~~~~~~~ll~~A~~~~i~~L~~ 79 (148)
+|||++|+||++|| ++++ |+.. ..|.+++++ +.+|+.+++|+|||++.+ +.+++.+++.+|++|+++.|++
T Consensus 48 ~vLaa~S~yF~~mf~~~~~~~e~~~--~~i~l~~v~--~~~f~~ll~~~Yt~~~~i--~~~~v~~ll~~A~~l~i~~l~~ 121 (256)
T 3hve_A 48 NILAAASPYIRTKLNYNPPKDDGST--YKIELEGIS--VMVMREILDYIFSGQIRL--NEDTIQDVVQAADLLLLTDLKT 121 (256)
T ss_dssp HHHHTTCHHHHHTC-------------CEEECSSCC--HHHHHHHHHHHHHSCCCC--C-CCHHHHHHHHHHHTCHHHHH
T ss_pred HHHHHcCHHHHHHhCCCCCcccCCC--CeEEeCCCC--HHHHHHHHhhccCCCCcc--cHhHHHHHHHHHHHHChHHHHH
Confidence 68999999999999 8887 5555 789999999 999999999999999998 8899999999999999999999
Q ss_pred HHHhhhchhcccccccccchhhHHHHHHHhhcCChHHHHHHHHHHHHHchHHhhcchhHHHHHhh
Q 044123 80 VCLHHMPASFQSSNARDFQSSNAIDFLRIGYNYQLDELRDAALNFIVKKVEELVFSDKYEESASE 144 (148)
Q Consensus 80 ~c~~~l~~~l~~~n~~~~~~~~~~~~~~~a~~~~~~~L~~~~~~~i~~~~~~~~~~~~f~~l~~~ 144 (148)
.|+++|.+.++++| |+.++.+|..|++..|.+.|.+||.+||.++..+++|.+|+.+
T Consensus 122 ~c~~~L~~~l~~~n--------~~~i~~~A~~~~~~~L~~~~~~~i~~~f~~v~~~~~f~~L~~~ 178 (256)
T 3hve_A 122 LCCEFLEGCIAAEN--------CIGIRDFALHYCLHHVHYLATEYLETHFRDVSSTEEFLELSPQ 178 (256)
T ss_dssp HHHHHHHHTCCSST--------THHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTTCHHHHSSCHH
T ss_pred HHHHHHHhhCCHhh--------HHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHhCCcchhcCCHH
Confidence 99999999999999 9999999999999999999999999999999999999988753
No 3
>3i3n_A Kelch-like protein 11; structural genomics, BTB, KLHL11A, SGC, structural genomics consortium, kelch repeat, secreted, protein binding; 2.60A {Homo sapiens} PDB: 4ap2_A* 4apf_A
Probab=99.94 E-value=1.7e-28 Score=181.75 Aligned_cols=128 Identities=16% Similarity=0.277 Sum_probs=115.3
Q ss_pred ceeecCCHHHHHhh-cCCCCCCCCCCCeeec------ccCCcHHHHHHHHHHHhCCCCCchhhHHHHHHHHHhccccchH
Q 044123 3 RIHAARSSILKDCL-DGKLLPISSTGGMTTM------EVAEEGEVLKALVDFLYTGSLPREKLQKHVVGLFAAGDNYEIE 75 (148)
Q Consensus 3 ~vLaa~S~~F~~~f-~~~~e~~~~~~~i~l~------~~~~~~~~~~~~l~yiYtg~~~~~~~~~~~~~ll~~A~~~~i~ 75 (148)
+|||++|+||++|| ++|+|+.+ .+|.++ +++ +++|+.+++|+|||++.+ +.+++.+++.+|++|+++
T Consensus 52 ~vLaa~S~yF~~mf~~~~~e~~~--~~i~l~~~~~~~~v~--~~~f~~ll~~~Ytg~~~i--~~~~v~~ll~~A~~l~i~ 125 (279)
T 3i3n_A 52 SVLAAATEYFTPLLSGQFSESRS--GRVEMRKWSSEPGPE--PDTVEAVIEYMYTGRIRV--STGSVHEVLELADRFLLI 125 (279)
T ss_dssp HHHHHHCTTSGGGCCC----------EEECCCCSSTTCSC--HHHHHHHHHHHHHSEEEE--ETTTHHHHHHHHHHTTCH
T ss_pred HHHHHcCHHHHHHhcCCCccccC--CeEEeccccccCCCC--HHHHHHHHHhhCcCCccc--CHHHHHHHHHHHHHHCcH
Confidence 68999999999999 99999988 889998 899 999999999999999988 888999999999999999
Q ss_pred HHHHHHHhhhchhcccccccccchhhHHHHHHHhhcCChHHHHHHHHHHHHHchHHhhcchhHHHHHhh
Q 044123 76 YLREVCLHHMPASFQSSNARDFQSSNAIDFLRIGYNYQLDELRDAALNFIVKKVEELVFSDKYEESASE 144 (148)
Q Consensus 76 ~L~~~c~~~l~~~l~~~n~~~~~~~~~~~~~~~a~~~~~~~L~~~~~~~i~~~~~~~~~~~~f~~l~~~ 144 (148)
.|++.|+++|.+.++++| |+.++.+|..++++.|.+.|.+||.+||.++..+++|.+|+.+
T Consensus 126 ~L~~~c~~~L~~~l~~~n--------~~~i~~~A~~~~~~~L~~~~~~~i~~~f~~v~~~~~f~~L~~~ 186 (279)
T 3i3n_A 126 RLKEFCGEFLKKKLHLSN--------CVAIHSLAHMYTLSQLALKAADMIRRNFHKVIQDEEFYTLPFH 186 (279)
T ss_dssp HHHHHHHHHHHHHCCTTT--------HHHHHHHHHHTTCHHHHHHHHHHHHHTHHHHTTSSGGGGSCHH
T ss_pred HHHHHHHHHHHHcCCcch--------HHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHhcCcChhcCCHH
Confidence 999999999999999999 9999999999999999999999999999999999999988653
No 4
>3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A
Probab=99.94 E-value=5.6e-27 Score=175.95 Aligned_cols=121 Identities=26% Similarity=0.404 Sum_probs=105.2
Q ss_pred ceeecCCHHHHHhh-cCCCCCCCCCCCeeecccCCcHHHHHHHHHHHhCCCCCchhhHHHHHHHHHhccccchHHHHHHH
Q 044123 3 RIHAARSSILKDCL-DGKLLPISSTGGMTTMEVAEEGEVLKALVDFLYTGSLPREKLQKHVVGLFAAGDNYEIEYLREVC 81 (148)
Q Consensus 3 ~vLaa~S~~F~~~f-~~~~e~~~~~~~i~l~~~~~~~~~~~~~l~yiYtg~~~~~~~~~~~~~ll~~A~~~~i~~L~~~c 81 (148)
+|||++|+||++|| ++++|+.. .+|.+++++ +++|+.+|+|+|||.++. +.+++.+|+.+|++|+++.|++.|
T Consensus 191 ~vLaa~S~~F~~~f~~~~~e~~~--~~i~l~~~~--~~~f~~~L~~iYt~~~~~--~~~~~~~ll~~A~~~~~~~l~~~c 264 (312)
T 3hqi_A 191 AILAARSPVFSAMFEHEMEESKK--NRVEINDVE--PEVFKEMMCFIYTGKAPN--LDKMADDLLAAADKYALERLKVMC 264 (312)
T ss_dssp HHHHHHCHHHHHHTTC-----CC--SEEEECSSC--HHHHHHHHHHHHHSCCTT--HHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHcCHHHHHHhccCccccCC--ceEEecCCC--HHHHHHHHHhhcCCCCCC--hHHHHHHHHHHHHHhCHHHHHHHH
Confidence 58999999999999 99999988 899999999 999999999999999998 789999999999999999999999
Q ss_pred HhhhchhcccccccccchhhHHHHHHHhhcCChHHHHHHHHHHHHHchHHhhcchh
Q 044123 82 LHHMPASFQSSNARDFQSSNAIDFLRIGYNYQLDELRDAALNFIVKKVEELVFSDK 137 (148)
Q Consensus 82 ~~~l~~~l~~~n~~~~~~~~~~~~~~~a~~~~~~~L~~~~~~~i~~~~~~~~~~~~ 137 (148)
+++|.+.++.+| |+.++.+|..|++..|++.|.+||..|+.++.++++
T Consensus 265 ~~~l~~~~~~~n--------~~~~l~~A~~~~~~~L~~~~~~~i~~~~~~v~~s~g 312 (312)
T 3hqi_A 265 EDALCSNLSVEN--------AAEILILADLHSADQLKTQAVDFINYHATDVLETSG 312 (312)
T ss_dssp HHHHHTTCCTTT--------HHHHHHHHHHTTCHHHHHHHHHHHHHTC--------
T ss_pred HHHHHccCCHHH--------HHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhhCCC
Confidence 999999999999 999999999999999999999999999999988764
No 5
>4eoz_A Speckle-type POZ protein; E3 ubiquitin ligase, nucleus, protein binding; 2.40A {Homo sapiens}
Probab=99.89 E-value=8.4e-25 Score=147.12 Aligned_cols=103 Identities=28% Similarity=0.419 Sum_probs=72.7
Q ss_pred ceeecCCHHHHHhh-cCCCCCCCCCCCeeecccCCcHHHHHHHHHHHhCCCCCchhhHHHHHHHHHhccccchHHHHHHH
Q 044123 3 RIHAARSSILKDCL-DGKLLPISSTGGMTTMEVAEEGEVLKALVDFLYTGSLPREKLQKHVVGLFAAGDNYEIEYLREVC 81 (148)
Q Consensus 3 ~vLaa~S~~F~~~f-~~~~e~~~~~~~i~l~~~~~~~~~~~~~l~yiYtg~~~~~~~~~~~~~ll~~A~~~~i~~L~~~c 81 (148)
+||+++|+||++|| ++++|+.. ..|.+++++ +++|+.+++|+|||+++. +.+++.+++.+|++|+++.|++.|
T Consensus 42 ~iL~~~S~~F~~~f~~~~~e~~~--~~i~l~~~~--~~~~~~~l~~~Y~~~~~~--~~~~~~~ll~~A~~~~~~~l~~~c 115 (145)
T 4eoz_A 42 AILAARSPVFSAMFEHEMEESKK--NRVEINDVE--PEVFKEMMCFIYTGKAPN--LDKMADDLLAAADKYALERLKVMC 115 (145)
T ss_dssp HHHHHHCHHHHHHHHSSSHHHHH--TEEEECSSC--HHHHHHHHHHHHHSCCTT--GGGTHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHcCHHHHHHHcCCCcCCCC--ceEEecCCC--HHHHHHHHHhhccCccCC--cHHHHHHHHHHHHHhCHHHHHHHH
Confidence 58999999999999 99998877 889999999 999999999999999988 888999999999999999999999
Q ss_pred HhhhchhcccccccccchhhHHHHHHHhhcCChHHHHH
Q 044123 82 LHHMPASFQSSNARDFQSSNAIDFLRIGYNYQLDELRD 119 (148)
Q Consensus 82 ~~~l~~~l~~~n~~~~~~~~~~~~~~~a~~~~~~~L~~ 119 (148)
+++|.+.++.+| |+.++.+|..|+++.|++
T Consensus 116 ~~~l~~~l~~~n--------~~~~l~~A~~~~~~~Lk~ 145 (145)
T 4eoz_A 116 EDALCSNLSVEN--------AAEILILADLHSADQLKT 145 (145)
T ss_dssp HCC-----------------------------------
T ss_pred HHHHHHhCCHHH--------HHHHHHHHHHhCHHHhcC
Confidence 999999999999 999999999999998864
No 6
>2vkp_A BTB/POZ domain-containing protein 6; protein-binding; 1.9A {Homo sapiens}
Probab=99.82 E-value=3.9e-21 Score=123.44 Aligned_cols=80 Identities=15% Similarity=0.263 Sum_probs=69.3
Q ss_pred ceeecCCHHHHHhh-cCCCCCCCCCCCeeecccCCcHHHHHHHHHHHhCCCCCchhhHHHHHHHHHhccccchHHHHHHH
Q 044123 3 RIHAARSSILKDCL-DGKLLPISSTGGMTTMEVAEEGEVLKALVDFLYTGSLPREKLQKHVVGLFAAGDNYEIEYLREVC 81 (148)
Q Consensus 3 ~vLaa~S~~F~~~f-~~~~e~~~~~~~i~l~~~~~~~~~~~~~l~yiYtg~~~~~~~~~~~~~ll~~A~~~~i~~L~~~c 81 (148)
+||+++|+||++|| ++|+|+. ..|.+++++ +++|+.+|+|+|||+++. +.+++.+++.+|++|+++.|++.|
T Consensus 29 ~iLa~~S~~F~~~f~~~~~e~~---~~i~l~~~~--~~~f~~~l~~iYt~~~~~--~~~~~~~ll~~A~~~~~~~L~~~c 101 (109)
T 2vkp_A 29 YVLAVGSSVFYAMFYGDLAEVK---SEIHIPDVE--PAAFLILLKYMYSDEIDL--EADTVLATLYAAKKYIVPALAKAC 101 (109)
T ss_dssp HHHHHHCHHHHHHHC------C---CEEEETTSC--HHHHHHHHHHHHHCCCCC--CTTTHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHcCHHHHHHhcCCcccCC---CeEEeCCCC--HHHHHHHHHHHcCCCccC--CHHHHHHHHHHHHHhCcHHHHHHH
Confidence 68999999999999 9998875 579999999 999999999999999998 789999999999999999999999
Q ss_pred Hhhhchhc
Q 044123 82 LHHMPASF 89 (148)
Q Consensus 82 ~~~l~~~l 89 (148)
+++|.+++
T Consensus 102 ~~~l~~~l 109 (109)
T 2vkp_A 102 VNFLETSL 109 (109)
T ss_dssp HHHHHHHC
T ss_pred HHHHHhhC
Confidence 99998764
No 7
>2if5_A Zinc finger and BTB domain-containing protein 7A; POZ domain, POK, proto oncogene, transcription F transcription; 2.00A {Homo sapiens} PDB: 2nn2_A
Probab=99.81 E-value=8.8e-21 Score=123.83 Aligned_cols=77 Identities=27% Similarity=0.351 Sum_probs=68.8
Q ss_pred ceeecCCHHHHHhh-cCCCCCCCCCCCeeecccCCcHHHHHHHHHHHhCCCCCchhhHHHHHHHHHhccccchHHHHHHH
Q 044123 3 RIHAARSSILKDCL-DGKLLPISSTGGMTTMEVAEEGEVLKALVDFLYTGSLPREKLQKHVVGLFAAGDNYEIEYLREVC 81 (148)
Q Consensus 3 ~vLaa~S~~F~~~f-~~~~e~~~~~~~i~l~~~~~~~~~~~~~l~yiYtg~~~~~~~~~~~~~ll~~A~~~~i~~L~~~c 81 (148)
+||+++|+||++|| ++|+|+.. ..|.+++++ +++|+.+++|+|||+++. +.+++.+++.+|++|+++.|++.|
T Consensus 42 ~vLaa~S~~F~~~f~~~~~e~~~--~~i~l~~~~--~~~f~~ll~~~Yt~~~~~--~~~~~~~ll~~A~~~~i~~L~~~C 115 (120)
T 2if5_A 42 SVLAACSQYFKKLFTSGAVVDQQ--NVYEIDFVS--AEALTALMDFAYTATLTV--STANVGDILSAARLLEIPAVSHVC 115 (120)
T ss_dssp HHHHHHCHHHHHHHHC-----CC--SEEECCSSC--HHHHHHHHHHHHHSCCCC--CGGGHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHhCHHHHHHhcCCccccCC--ceEEeCCCC--HHHHHHHHHHHcCCCCcc--CHHHHHHHHHHHHHhCCHHHHHHH
Confidence 68999999999999 99999887 889999999 999999999999999998 888999999999999999999999
Q ss_pred Hhhh
Q 044123 82 LHHM 85 (148)
Q Consensus 82 ~~~l 85 (148)
+++|
T Consensus 116 ~~~L 119 (120)
T 2if5_A 116 ADLL 119 (120)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 9986
No 8
>2z8h_A Transcription regulator protein BACH1; BTB, POZ, disulfide bond, activator, DNA-binding, nucleus, phosphorylation, repressor; 2.50A {Mus musculus}
Probab=99.80 E-value=1.5e-20 Score=125.78 Aligned_cols=83 Identities=20% Similarity=0.236 Sum_probs=77.1
Q ss_pred ceeecCCHHHHHhh-cCCCCCCCCCCCeeec-ccCCcHHHHHHHHHHHhCCCCCchhhHHHHHHHHHhccccchHHHHHH
Q 044123 3 RIHAARSSILKDCL-DGKLLPISSTGGMTTM-EVAEEGEVLKALVDFLYTGSLPREKLQKHVVGLFAAGDNYEIEYLREV 80 (148)
Q Consensus 3 ~vLaa~S~~F~~~f-~~~~e~~~~~~~i~l~-~~~~~~~~~~~~l~yiYtg~~~~~~~~~~~~~ll~~A~~~~i~~L~~~ 80 (148)
+|||++|+||++|| ++++|+ ..|.++ +++ +++|+.+|+|+|||++++ +.+++.+++.+|++|+++.|++.
T Consensus 53 ~vLaa~S~yF~~~f~~~~~e~----~~i~l~~~v~--~~~~~~lL~~~Ytg~~~i--~~~~v~~ll~~A~~~~i~~L~~~ 124 (138)
T 2z8h_A 53 SVLAACSSYFHSRIVGQTDAE----LTVTLPEEVT--VKGFEPLIQFAYTAKLIL--SKDNVDEVCRCVEFLSVHNIEES 124 (138)
T ss_dssp HHHHHHCHHHHHHHTTCCCTT----EEEECCTTSC--HHHHHHHHHHHHHSCCCC--CTTTHHHHHHHHHHHTCGGGHHH
T ss_pred HHHHHcCHHHHHHHhcCCCCC----ceEEeCCCCC--HHHHHHHHHHhcCCCccc--CHHHHHHHHHHHHHhCCHHHHHH
Confidence 68999999999999 888774 358885 899 999999999999999998 88899999999999999999999
Q ss_pred HHhhhchhccccc
Q 044123 81 CLHHMPASFQSSN 93 (148)
Q Consensus 81 c~~~l~~~l~~~n 93 (148)
|+++|.+.++.+|
T Consensus 125 C~~~l~~~l~~sn 137 (138)
T 2z8h_A 125 CFQFLKFKFLDST 137 (138)
T ss_dssp HHHHTTCCCSCCC
T ss_pred HHHHHHHhccccc
Confidence 9999999999887
No 9
>1r29_A B-cell lymphoma 6 protein; BTB domain, transcriptional repression, transcription; 1.30A {Homo sapiens} SCOP: d.42.1.1 PDB: 1r28_A 1r2b_A 3bim_A 3lbz_A* 3e4u_A
Probab=99.80 E-value=2.7e-20 Score=122.73 Aligned_cols=78 Identities=19% Similarity=0.276 Sum_probs=73.2
Q ss_pred ceeecCCHHHHHhh-cCCCCCCCCCCCeee-cccCCcHHHHHHHHHHHhCCCCCchhhHHHHHHHHHhccccchHHHHHH
Q 044123 3 RIHAARSSILKDCL-DGKLLPISSTGGMTT-MEVAEEGEVLKALVDFLYTGSLPREKLQKHVVGLFAAGDNYEIEYLREV 80 (148)
Q Consensus 3 ~vLaa~S~~F~~~f-~~~~e~~~~~~~i~l-~~~~~~~~~~~~~l~yiYtg~~~~~~~~~~~~~ll~~A~~~~i~~L~~~ 80 (148)
+|||++|+||++|| ++++| .. ..|.+ ++++ +++|+.+|+|+|||++++ +.+++.+++.+|++|+++.|++.
T Consensus 46 ~iLaa~S~~F~~~f~~~~~e-~~--~~i~l~~~~~--~~~f~~ll~~~Ytg~~~~--~~~~~~~ll~~A~~~~i~~L~~~ 118 (127)
T 1r29_A 46 TVLMACSGLFYSIFTDQLKR-NL--SVINLDPEIN--PEGFNILLDFMYTSRLNL--REGNIMAVMATAMYLQMEHVVDT 118 (127)
T ss_dssp HHHHHHCHHHHHHHTSTTTT-TC--SEEECCTTSC--HHHHHHHHHHHHHSCCCC--CTTTHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHhCHHHHHHhcCCccC-CC--CEEEeCCCCC--HHHHHHHHHHHcCCCcCc--CHHHHHHHHHHHHHhCCHHHHHH
Confidence 68999999999999 99998 55 78999 8999 999999999999999998 88999999999999999999999
Q ss_pred HHhhhch
Q 044123 81 CLHHMPA 87 (148)
Q Consensus 81 c~~~l~~ 87 (148)
|+++|.+
T Consensus 119 c~~~l~~ 125 (127)
T 1r29_A 119 CRKFIKA 125 (127)
T ss_dssp HHHHHHT
T ss_pred HHHHHHh
Confidence 9999875
No 10
>2ppi_A Gigaxonin; BTB domain, protein degradation, structural genomics, struct genomics consortium, SGC, structural protein; 2.40A {Homo sapiens}
Probab=99.80 E-value=2.5e-20 Score=125.55 Aligned_cols=80 Identities=18% Similarity=0.271 Sum_probs=69.3
Q ss_pred ceeecCCHHHHHhh-cCCCCCCCCCCCeeecccCCcHHHHHHHHHHHhCCCCCchhhHHHHHHHHHhccccchHHHHHHH
Q 044123 3 RIHAARSSILKDCL-DGKLLPISSTGGMTTMEVAEEGEVLKALVDFLYTGSLPREKLQKHVVGLFAAGDNYEIEYLREVC 81 (148)
Q Consensus 3 ~vLaa~S~~F~~~f-~~~~e~~~~~~~i~l~~~~~~~~~~~~~l~yiYtg~~~~~~~~~~~~~ll~~A~~~~i~~L~~~c 81 (148)
+|||++|+||++|| +++++......+|.+++++ +++|+.+|+|+|||++++ +.+++.+++.+|++|+++.|++.|
T Consensus 64 ~vLaa~S~yF~~mf~~~~~e~e~~~~~I~l~~v~--~~~f~~lL~fiYtg~~~i--~~~~v~~ll~~A~~l~i~~L~~~C 139 (144)
T 2ppi_A 64 NILAAASPYIRTKLNYNPPKDDGSTYKIELEGIS--VMVMREILDYIFSGQIRL--NEDTIQDVVQAADLLLLTDLKTLC 139 (144)
T ss_dssp HHHHHHCHHHHHHHHHCC-----CCCEEECCSSC--HHHHHHHHHHHTTSCCCC--CTTTHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHcCHHHHHHHcCCCccccCCCcEEEeCCCC--HHHHHHHHHHHhCCCCCC--CHHHHHHHHHHHHHhCcHHHHHHH
Confidence 68999999999999 8887633222789999999 999999999999999988 889999999999999999999999
Q ss_pred Hhhhc
Q 044123 82 LHHMP 86 (148)
Q Consensus 82 ~~~l~ 86 (148)
+++|.
T Consensus 140 ~~~L~ 144 (144)
T 2ppi_A 140 CEFLE 144 (144)
T ss_dssp HTTC-
T ss_pred HHHhC
Confidence 99873
No 11
>3b84_A Zinc finger and BTB domain-containing protein 48; krueppel related zinc finger protein 3, HKR3, ZBTB48, Z finger, oncogene; 1.74A {Homo sapiens}
Probab=99.78 E-value=8.1e-20 Score=119.22 Aligned_cols=76 Identities=22% Similarity=0.361 Sum_probs=68.5
Q ss_pred ceeecCCHHHHHhh-cCCCCCCCCCCCeeecccCCcHHHHHHHHHHHhCCCCCchhhHHHHHHHHHhccccchHHHHHHH
Q 044123 3 RIHAARSSILKDCL-DGKLLPISSTGGMTTMEVAEEGEVLKALVDFLYTGSLPREKLQKHVVGLFAAGDNYEIEYLREVC 81 (148)
Q Consensus 3 ~vLaa~S~~F~~~f-~~~~e~~~~~~~i~l~~~~~~~~~~~~~l~yiYtg~~~~~~~~~~~~~ll~~A~~~~i~~L~~~c 81 (148)
+|||++|+||++|| +++ . ..|.+++++ +++|+.+|+|+|||++++ +.+++.+++.+|++|+++.|++.|
T Consensus 41 ~vLaa~S~yF~~~f~~~~----~--~~i~l~~~~--~~~f~~ll~~iYtg~~~~--~~~~v~~ll~~A~~~~i~~L~~~C 110 (119)
T 3b84_A 41 SVLACCSHFFQSLYGDGS----G--GSVVLPAGF--AEIFGLLLDFFYTGHLAL--TSGNRDQVLLAARELRVPEAVELC 110 (119)
T ss_dssp HHHHHHCHHHHHHHTTTT----C--CCEEECGGG--HHHHHHHHHHHHHSCCCC--CTTTHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHhhcCHHHHHHHCCCC----C--CeEEeCCCC--HHHHHHHHHHHcCCCCcc--CHHHHHHHHHHHHHhCcHHHHHHH
Confidence 68999999999999 765 3 679999999 999999999999999998 888999999999999999999999
Q ss_pred Hhhhchh
Q 044123 82 LHHMPAS 88 (148)
Q Consensus 82 ~~~l~~~ 88 (148)
+++|.+.
T Consensus 111 ~~~l~~~ 117 (119)
T 3b84_A 111 QSFKPKT 117 (119)
T ss_dssp HHCC---
T ss_pred HHHHHHc
Confidence 9998754
No 12
>2yy9_A Zinc finger and BTB domain-containing protein 48; mouse, HKR3, structural genomics, NPPSFA; 2.60A {Mus musculus}
Probab=99.78 E-value=8.2e-20 Score=121.73 Aligned_cols=81 Identities=21% Similarity=0.327 Sum_probs=67.4
Q ss_pred ceeecCCHHHHHhh-cCCCCCCCCCCCeeecccCCcHHHHHHHHHHHhCCCCCchhhHHHHHHHHHhccccchHHHHHHH
Q 044123 3 RIHAARSSILKDCL-DGKLLPISSTGGMTTMEVAEEGEVLKALVDFLYTGSLPREKLQKHVVGLFAAGDNYEIEYLREVC 81 (148)
Q Consensus 3 ~vLaa~S~~F~~~f-~~~~e~~~~~~~i~l~~~~~~~~~~~~~l~yiYtg~~~~~~~~~~~~~ll~~A~~~~i~~L~~~c 81 (148)
+||+++|+||++|| +++ . .+|.+++++ +++|+.+|+|+|||++.+ +.+++.+++.+|++|+++.|++.|
T Consensus 42 ~vLaa~S~yF~~mf~~~~----~--~~i~l~~~~--~~~f~~lL~fiYtg~~~i--~~~~v~~ll~~A~~l~i~~L~~~C 111 (135)
T 2yy9_A 42 SVLACCSHFFQRIYGDGT----G--GSVVLPAGF--AEIFGLLLDFFYTGHLAL--TSGNRDQVLLAAKELRVPEAVELC 111 (135)
T ss_dssp HHHHHHCHHHHHTCC----------CCEEECGGG--HHHHHHHHHHHHHSCCCC--CTTTHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHhCHHHHHHHcCCC----C--CeEEeCCCC--HHHHHHHHHHHhCCCCCC--CHHHHHHHHHHHHHhCcHHHHHHH
Confidence 68999999999999 766 3 679999999 999999999999999998 888999999999999999999999
Q ss_pred Hhhhchhccccc
Q 044123 82 LHHMPASFQSSN 93 (148)
Q Consensus 82 ~~~l~~~l~~~n 93 (148)
+++|.+.+...+
T Consensus 112 ~~~l~~~l~~~~ 123 (135)
T 2yy9_A 112 QSFQPQTSVGQA 123 (135)
T ss_dssp HHCCC-------
T ss_pred HHHHHHhccCCC
Confidence 999999877655
No 13
>1buo_A POZ domain, protein (promyelocytic leukemia zinc finger prote; protein-protein interaction domain, transcriptional represso finger protein; 1.90A {Homo sapiens} SCOP: d.42.1.1 PDB: 1cs3_A
Probab=99.76 E-value=4.1e-19 Score=116.16 Aligned_cols=75 Identities=23% Similarity=0.362 Sum_probs=69.3
Q ss_pred ceeecCCHHHHHhh-cCCCCCCCCCCCeeecccCCcHHHHHHHHHHHhCCCCCchhhHHHHHHHHHhccccchHHHHHHH
Q 044123 3 RIHAARSSILKDCL-DGKLLPISSTGGMTTMEVAEEGEVLKALVDFLYTGSLPREKLQKHVVGLFAAGDNYEIEYLREVC 81 (148)
Q Consensus 3 ~vLaa~S~~F~~~f-~~~~e~~~~~~~i~l~~~~~~~~~~~~~l~yiYtg~~~~~~~~~~~~~ll~~A~~~~i~~L~~~c 81 (148)
+|||++|+||++|| ++ . .+|.+++++ +++|+.+++|+|||+++. +.+++.+++.+|++|+++.|++.|
T Consensus 45 ~vLaa~S~yF~~~f~~~-----~--~~i~l~~~~--~~~f~~ll~~~Ytg~~~~--~~~~~~~ll~~A~~~~i~~L~~~c 113 (121)
T 1buo_A 45 TVLACTSKMFEILFHRN-----S--QHYTLDFLS--PKTFQQILEYAYTATLQA--KAEDLDDLLYAAEILEIEYLEEQC 113 (121)
T ss_dssp HHHHHHCHHHHHHTTSC-----C--SEEEECSSC--HHHHHHHHHHHHHSCCCC--CGGGHHHHHHHHHHHTCHHHHHHH
T ss_pred HHHhhcCHHHHHHHcCC-----C--cEEEeCCCC--HHHHHHHHHhhcCCCcCC--CHHHHHHHHHHHHHHCCHHHHHHH
Confidence 68999999999999 53 3 569999999 999999999999999998 889999999999999999999999
Q ss_pred Hhhhchh
Q 044123 82 LHHMPAS 88 (148)
Q Consensus 82 ~~~l~~~ 88 (148)
+++|.+.
T Consensus 114 ~~~l~~~ 120 (121)
T 1buo_A 114 LKMLETI 120 (121)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 9998764
No 14
>2vpk_A Myoneurin; transcription regulation, transcription, metal-binding, alternative splicing, zinc, nucleus, BTB domain, zinc-finger, DNA-binding; 2.00A {Homo sapiens}
Probab=99.76 E-value=4.8e-19 Score=114.93 Aligned_cols=74 Identities=20% Similarity=0.273 Sum_probs=67.7
Q ss_pred ceeecCCHHHHHhh-cCCCCCCCCCCCeeec--ccCCcHHHHHHHHHHHhCCCCCchhhHHHHHHHHHhccccchHHHHH
Q 044123 3 RIHAARSSILKDCL-DGKLLPISSTGGMTTM--EVAEEGEVLKALVDFLYTGSLPREKLQKHVVGLFAAGDNYEIEYLRE 79 (148)
Q Consensus 3 ~vLaa~S~~F~~~f-~~~~e~~~~~~~i~l~--~~~~~~~~~~~~l~yiYtg~~~~~~~~~~~~~ll~~A~~~~i~~L~~ 79 (148)
+||+++|+||++|| ++ .. ..|.++ +++ +++|+.+++|+|||++++ +.+++.+++.+|++|+++.|++
T Consensus 39 ~vLaa~S~yF~~~f~~~----~~--~~i~l~~~~~~--~~~f~~ll~~~Yt~~~~~--~~~~v~~ll~~A~~~~i~~L~~ 108 (116)
T 2vpk_A 39 NVLASFSEYFGAIYRST----SE--NNVFLDQSQVK--ADGFQKLLEFIYTGTLNL--DSWNVKEIHQAADYLKVEEVVT 108 (116)
T ss_dssp HHHHHHCHHHHHHHTTC----CC--SCEECCTTTCC--HHHHHHHHHHHHHSCCCC--CTTTHHHHHHHHHHTTCHHHHH
T ss_pred HHHhhcCHHHHHHHcCC----CC--CeEEeecCCCC--HHHHHHHHHHHcCCCccc--CHHHHHHHHHHHHHhCCHHHHH
Confidence 68999999999999 65 23 567887 999 999999999999999998 8889999999999999999999
Q ss_pred HHHhhhc
Q 044123 80 VCLHHMP 86 (148)
Q Consensus 80 ~c~~~l~ 86 (148)
.|+++|.
T Consensus 109 ~C~~~l~ 115 (116)
T 2vpk_A 109 KCKIKME 115 (116)
T ss_dssp HHHHHHC
T ss_pred HHHHHHh
Confidence 9999885
No 15
>2q81_A MIZ-1 protein; BTB/POZ domain, transcription; HET: PG4; 2.10A {Homo sapiens} PDB: 3m52_A
Probab=99.72 E-value=1.6e-18 Score=113.01 Aligned_cols=73 Identities=18% Similarity=0.203 Sum_probs=67.1
Q ss_pred ceeecCCHHHHHhh-cCCCCCCCCCCCeeecccCCcHHHHHHHHHHHhCCCCCchhhHHHHHHHHHhccccchHHHHHHH
Q 044123 3 RIHAARSSILKDCL-DGKLLPISSTGGMTTMEVAEEGEVLKALVDFLYTGSLPREKLQKHVVGLFAAGDNYEIEYLREVC 81 (148)
Q Consensus 3 ~vLaa~S~~F~~~f-~~~~e~~~~~~~i~l~~~~~~~~~~~~~l~yiYtg~~~~~~~~~~~~~ll~~A~~~~i~~L~~~c 81 (148)
+||+++|+||++|| ++ . .+|.+++++ +++|+.+++|+|||++.. +.+++.+++.+|++|+++.|++.|
T Consensus 44 ~vLaa~S~yF~~~f~~~-----~--~~i~l~~~~--~~~f~~ll~~~Ytg~~~i--~~~~~~~ll~~A~~l~i~~L~~~C 112 (119)
T 2q81_A 44 AVLAACSEYFKMLFVDQ-----K--DVVHLDISN--AAGLGQVLEFMYTAKLSL--SPENVDDVLAVATFLQMQDIITAC 112 (119)
T ss_dssp HHHHHHCHHHHHHHHHC-----C--SGGGGGGCC--HHHHHHHHHHHHHSCCCC--CTTTHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHcCHHHHHHHcCC-----C--CEEEeCCCC--HHHHHHHHHHHcCCCCcc--CHHHHHHHHHHHHHhCCHHHHHHH
Confidence 68999999999999 62 3 568889999 999999999999999998 888999999999999999999999
Q ss_pred Hhhhc
Q 044123 82 LHHMP 86 (148)
Q Consensus 82 ~~~l~ 86 (148)
+++|.
T Consensus 113 ~~~l~ 117 (119)
T 2q81_A 113 HALKS 117 (119)
T ss_dssp HHHHT
T ss_pred HHHHh
Confidence 99875
No 16
>3ohu_A Transcription regulator protein BACH2; BTB/POZ domain; 2.10A {Homo sapiens} SCOP: d.42.1.0 PDB: 3ohv_A
Probab=99.71 E-value=1.8e-19 Score=118.47 Aligned_cols=75 Identities=17% Similarity=0.239 Sum_probs=69.1
Q ss_pred ceeecCCHHHHHhh-cCCCCCCCCCCCeeecc-cCCcHHHHHHHHHHHhCCCCCchhhHHHHHHHHHhccccchHHHHHH
Q 044123 3 RIHAARSSILKDCL-DGKLLPISSTGGMTTME-VAEEGEVLKALVDFLYTGSLPREKLQKHVVGLFAAGDNYEIEYLREV 80 (148)
Q Consensus 3 ~vLaa~S~~F~~~f-~~~~e~~~~~~~i~l~~-~~~~~~~~~~~l~yiYtg~~~~~~~~~~~~~ll~~A~~~~i~~L~~~ 80 (148)
+|||++|+||++|| ++++| . ..|.+++ ++ +++|+.+++|+|||++++ +.+++.+++.+|++|+++.|++.
T Consensus 49 ~vLaa~S~yF~~~f~~~~~e--~--~~i~l~~~~~--~~~f~~~l~~iYtg~~~~--~~~~v~~ll~~A~~l~i~~L~~~ 120 (125)
T 3ohu_A 49 AVLAACSEYFWQALVGQTKN--D--LVVSLPEEVT--ARGFGPLLQFAYTAKLLL--SRENIREVIRCAEFLRMHNLEDS 120 (125)
T ss_dssp HHHHHHBHHHHHHHTTCCCS--S--CEEECCTTCC--HHHHHHHHHHHTTSEEEE--CTTTHHHHHHHHHHHTBSSCTTS
T ss_pred HHHHHcCHHHHHHhcCCCCC--C--cEEEeCCCCC--HHHHHHHHHhHcCCceEE--CHHHHHHHHHHHHHhCCHHHHHH
Confidence 68999999999999 88877 3 5699998 99 999999999999999988 88999999999999999999999
Q ss_pred HHhhh
Q 044123 81 CLHHM 85 (148)
Q Consensus 81 c~~~l 85 (148)
|+++|
T Consensus 121 C~~~L 125 (125)
T 3ohu_A 121 CFSFL 125 (125)
T ss_dssp SCCCC
T ss_pred HHHhC
Confidence 98764
No 17
>2ihc_A Transcription regulator protein BACH1; BRIC-A-BRAC domain,transcription factor, protein-PROT interaction; 2.44A {Homo sapiens}
Probab=99.71 E-value=1.8e-19 Score=118.40 Aligned_cols=76 Identities=20% Similarity=0.229 Sum_probs=66.5
Q ss_pred ceeecCCHHHHHhh-cCCCCCCCCCCCeee-cccCCcHHHHHHHHHHHhCCCCCchhhHHHHHHHHHhccccchHHHHHH
Q 044123 3 RIHAARSSILKDCL-DGKLLPISSTGGMTT-MEVAEEGEVLKALVDFLYTGSLPREKLQKHVVGLFAAGDNYEIEYLREV 80 (148)
Q Consensus 3 ~vLaa~S~~F~~~f-~~~~e~~~~~~~i~l-~~~~~~~~~~~~~l~yiYtg~~~~~~~~~~~~~ll~~A~~~~i~~L~~~ 80 (148)
+|||++|+||++|| ++++|+ ..|.+ .+++ +++|+.+|+|+|||++++ +.+++.+++.+|++|+++.|++.
T Consensus 46 ~vLaa~S~yF~~mf~~~~~e~----~~i~l~~~v~--~~~f~~lL~~iYtg~~~i--~~~~v~~ll~~A~~~~~~~L~~~ 117 (124)
T 2ihc_A 46 SVLAACSSYFHSRIVGQADGE----LNITLPEEVT--VKGFEPLIQFAYTAKLIL--SKENVDEVCKCVEFLSVHNIEES 117 (124)
T ss_dssp HHHHHHBHHHHHHHTTC---C----EEEECCTTSC--HHHHHHHHHHHHHSEEEE--ETTTHHHHHHHHHHHTBSSCCGG
T ss_pred HHHHHcCHHHHHHHcCCCCCC----ceEeecCCcC--HHHHHHHHHHhcCCCccc--CHHHHHHHHHHHHHHCCHHHHHH
Confidence 68999999999999 888775 34888 4899 999999999999999988 88899999999999999999999
Q ss_pred HHhhhc
Q 044123 81 CLHHMP 86 (148)
Q Consensus 81 c~~~l~ 86 (148)
|+++|.
T Consensus 118 C~~~l~ 123 (124)
T 2ihc_A 118 CFQFLK 123 (124)
T ss_dssp GGGTC-
T ss_pred HHHHHh
Confidence 999874
No 18
>3ga1_A Nucleus accumbens-associated protein 1; BTB/POZ domain, phosphoprotein, repressor, transcri transcription regulation; 2.10A {Homo sapiens}
Probab=99.69 E-value=7.2e-19 Score=116.20 Aligned_cols=76 Identities=20% Similarity=0.186 Sum_probs=62.8
Q ss_pred ceeecCCHHHHHhh-cCCCCCCCCCCCeeec-ccCCcHHHHHHHHHHHhCCCCCchhhHHHHHHHHHhccccchHHHHHH
Q 044123 3 RIHAARSSILKDCL-DGKLLPISSTGGMTTM-EVAEEGEVLKALVDFLYTGSLPREKLQKHVVGLFAAGDNYEIEYLREV 80 (148)
Q Consensus 3 ~vLaa~S~~F~~~f-~~~~e~~~~~~~i~l~-~~~~~~~~~~~~l~yiYtg~~~~~~~~~~~~~ll~~A~~~~i~~L~~~ 80 (148)
+||+++|+||++|| ++ .. ..|.++ +++ +++|+.+++|+|||++.+ +.+++.+++.+|++|+++.|++.
T Consensus 50 ~vLaa~S~~F~~~f~~~----~~--~~i~l~~~~~--~~~f~~ll~~iYtg~~~i--~~~~~~~ll~~A~~~~i~~l~~~ 119 (129)
T 3ga1_A 50 AVLAASSSYFRDLFNNS----RS--AVVELPAAVQ--PQSFQQILSFCYTGRLSM--NVGDQDLLMYTAGFLQIQEIMEK 119 (129)
T ss_dssp HHHHHHBHHHHHHHHHC----CC--SEEECCTTCC--HHHHHHHHHHHHHSEEEC--CTTTHHHHHHHHHHTTBTTSSCC
T ss_pred HHHHHcCHHHHHHHcCC----CC--CEEEECCCCC--HHHHHHHHHHHhCCcccc--CHHHHHHHHHHHHHhCCHHHHHH
Confidence 58999999999999 65 33 679996 899 999999999999999988 88899999999999999999999
Q ss_pred HHhhhchh
Q 044123 81 CLHHMPAS 88 (148)
Q Consensus 81 c~~~l~~~ 88 (148)
|+++|.+.
T Consensus 120 C~~~L~~~ 127 (129)
T 3ga1_A 120 GTEFFLKV 127 (129)
T ss_dssp --------
T ss_pred HHHHHHHh
Confidence 99998864
No 19
>3m5b_A Zinc finger and BTB domain-containing protein 32; POZ domain, BTB/POZ domain, ZBTB32, zinc finger domain-containing protein 32; 2.00A {Homo sapiens} SCOP: d.42.1.0
Probab=99.62 E-value=5.5e-17 Score=105.84 Aligned_cols=71 Identities=17% Similarity=0.166 Sum_probs=63.7
Q ss_pred ceeecCCHHHHHhhcCCCCCCCCCCCeeecccCCcHHHHHHHHHHHhCCCCCchhhHHHHHHHHHhccccchHHHHHHHH
Q 044123 3 RIHAARSSILKDCLDGKLLPISSTGGMTTMEVAEEGEVLKALVDFLYTGSLPREKLQKHVVGLFAAGDNYEIEYLREVCL 82 (148)
Q Consensus 3 ~vLaa~S~~F~~~f~~~~e~~~~~~~i~l~~~~~~~~~~~~~l~yiYtg~~~~~~~~~~~~~ll~~A~~~~i~~L~~~c~ 82 (148)
+|||++|+||++ .. ..|.+++++ +++|+.+|+|+|||++.+ +.+++.+++.+|++|+++.|++.|+
T Consensus 47 ~vLaa~S~yF~~--------~~--~~i~l~~v~--~~~f~~ll~fiYtg~~~i--~~~~v~~ll~aA~~l~i~~l~~~C~ 112 (119)
T 3m5b_A 47 LVLAGVSQQLGR--------RG--QWALGEGIS--PSTFAQLLNFVYGESVEL--QPGELRPLQEAARALGVQSLEEACW 112 (119)
T ss_dssp HHHHTTCGGGCC--------CE--EEECCSSCC--HHHHHHHHHHHTTCCEEE--CGGGHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHcCHHHhc--------CC--CEEEeCCCC--HHHHHHHHHHHcCCCcCc--CHHHHHHHHHHHHHhCCHHHHHHHH
Confidence 689999999974 23 568999999 999999999999999988 8899999999999999999999999
Q ss_pred hhhch
Q 044123 83 HHMPA 87 (148)
Q Consensus 83 ~~l~~ 87 (148)
+++..
T Consensus 113 ~~~~~ 117 (119)
T 3m5b_A 113 RARGD 117 (119)
T ss_dssp HHC--
T ss_pred HHHhh
Confidence 98765
No 20
>3fkc_A Transcriptional regulator kaiso; zinc finger and BTB domain containing 33, kaiso transcriptio ZNF-kaiso, ZNF348,wugsc:H_DJ525N14.1; 1.70A {Homo sapiens} PDB: 3m4t_A 3m8v_A
Probab=99.61 E-value=3.7e-16 Score=101.42 Aligned_cols=66 Identities=11% Similarity=0.268 Sum_probs=60.4
Q ss_pred ceeecCCHHHHHhh-cCCCCCCCCCCCeeecccCCcHHHHHHHHHHHhCCCC-CchhhHHHHHHHHHhccccchHHHHH
Q 044123 3 RIHAARSSILKDCL-DGKLLPISSTGGMTTMEVAEEGEVLKALVDFLYTGSL-PREKLQKHVVGLFAAGDNYEIEYLRE 79 (148)
Q Consensus 3 ~vLaa~S~~F~~~f-~~~~e~~~~~~~i~l~~~~~~~~~~~~~l~yiYtg~~-~~~~~~~~~~~ll~~A~~~~i~~L~~ 79 (148)
+|||++|+||++|| ++ . ..|.+++++ +++|+.+++|+|||++ .. +.+++.+++.+|++|+++.|++
T Consensus 48 ~vLaa~S~~F~~~f~~~-----~--~~i~l~~~~--~~~f~~~l~~~Ytg~~~~~--~~~~~~~ll~~A~~l~i~~L~~ 115 (116)
T 3fkc_A 48 NILSASSTYFHQLFSVA-----G--QVVELSFIR--AEIFAEILNYIYSSKIVRV--RSDLLDELIKSGQLLGVKFIAA 115 (116)
T ss_dssp HHHHHHCHHHHHHTTSC-----C--SEEEECSSC--HHHHHHHHHHHTTSCCCSC--CHHHHHHHHHHHHHHTCHHHHT
T ss_pred HHHHHcCHHHHHHHcCC-----C--CEEEeCCCC--HHHHHHHHHhhcCCCcCCC--CHHHHHHHHHHHHHhCccccCc
Confidence 68999999999999 64 3 679999999 9999999999999999 57 8899999999999999999875
No 21
>2ast_A S-phase kinase-associated protein 1A; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} PDB: 2ass_A* 2e31_B 2e32_B 3l2o_A 1p22_B* 2ovr_A* 2ovp_A 1fqv_B* 2ovq_A*
Probab=99.45 E-value=3e-13 Score=92.29 Aligned_cols=82 Identities=20% Similarity=0.196 Sum_probs=70.6
Q ss_pred ecCCHHHHHhh-c-CCC-CCCCCCCCeeecccCCcHHHHHHHHHHHhCCC--------------------------CCch
Q 044123 6 AARSSILKDCL-D-GKL-LPISSTGGMTTMEVAEEGEVLKALVDFLYTGS--------------------------LPRE 56 (148)
Q Consensus 6 aa~S~~F~~~f-~-~~~-e~~~~~~~i~l~~~~~~~~~~~~~l~yiYtg~--------------------------~~~~ 56 (148)
|+.|+||++|| + ++. |+.. ..|++++++ +.+++.+++|+|++. +.+
T Consensus 20 A~~S~~i~~m~~~~~~~~e~~~--~~Ipl~~V~--~~iL~kViey~~~h~~~~~~~~~~~~~~~~~~~i~~wD~~F~~i- 94 (159)
T 2ast_A 20 AKQSVTIKTMLEDLGMDDEGDD--DPVPLPNVN--AAILKKVIQWCTHHKDDPPPPEDDENKEKRTDDIPVWDQEFLKV- 94 (159)
T ss_dssp HHTCHHHHHHTTSSCSS--------CEECTTSC--HHHHHHHHHHHHHTTTCCC-----------CCCCCHHHHHHTCS-
T ss_pred HHHhHHHHHHHHhcCCcccccC--CCcCCCCcc--HHHHHHHHHHHHHcCcCCCCcccccccccchhhhhHHHHHHHcC-
Confidence 78999999999 6 677 6666 789999999 999999999999977 444
Q ss_pred hhHHHHHHHHHhccccchHHHHHHHHhhhchhccccc
Q 044123 57 KLQKHVVGLFAAGDNYEIEYLREVCLHHMPASFQSSN 93 (148)
Q Consensus 57 ~~~~~~~~ll~~A~~~~i~~L~~~c~~~l~~~l~~~n 93 (148)
+.+++.+|+.+|++++|..|.+.|++++...+...+
T Consensus 95 -d~~~l~eLl~AAnyL~I~~Lld~~c~~va~~i~gkt 130 (159)
T 2ast_A 95 -DQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKT 130 (159)
T ss_dssp -CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHSSCC
T ss_pred -CHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCC
Confidence 678999999999999999999999999999988877
No 22
>1fs1_B SKP1, cyclin A/CDK2-associated P45; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.157.1.1 d.42.1.1 PDB: 1fs2_B 1ldk_D
Probab=99.06 E-value=6.2e-10 Score=74.30 Aligned_cols=78 Identities=19% Similarity=0.202 Sum_probs=68.4
Q ss_pred ecCCHHHHHhh-cCCCCCCCCCCCeeecccCCcHHHHHHHHHHHhCCC--------------------------CCchhh
Q 044123 6 AARSSILKDCL-DGKLLPISSTGGMTTMEVAEEGEVLKALVDFLYTGS--------------------------LPREKL 58 (148)
Q Consensus 6 aa~S~~F~~~f-~~~~e~~~~~~~i~l~~~~~~~~~~~~~l~yiYtg~--------------------------~~~~~~ 58 (148)
|..|.++++|| +. + . ..|++++++ ..+++.+++|+|+.. +.. +
T Consensus 21 A~~S~~ik~ml~~~---~-~--~~Ipl~~V~--~~iL~kVieyc~~h~~~~~~~~~~~~~~~~~~~i~~wD~~F~~v--d 90 (141)
T 1fs1_B 21 AKQSVTIKTMLEDL---G-M--DPVPLPNVN--AAILKKVIQWCTHHKDDPPPPEDDENKEKRTDDIPVWDQEFLKV--D 90 (141)
T ss_dssp GGTCHHHHHHHHHT---C-C--SSEECTTCC--HHHHHHHHHHHHHHTTCC-----------------HHHHHHTCS--C
T ss_pred HHHhHHHHHHHHhc---C-C--CceecCCcC--HHHHHHHHHHHHHhccCCCccccccccccchhhhhHHHHHHHhC--C
Confidence 78999999999 53 1 3 679999999 999999999999854 223 6
Q ss_pred HHHHHHHHHhccccchHHHHHHHHhhhchhccccc
Q 044123 59 QKHVVGLFAAGDNYEIEYLREVCLHHMPASFQSSN 93 (148)
Q Consensus 59 ~~~~~~ll~~A~~~~i~~L~~~c~~~l~~~l~~~n 93 (148)
.+++.+|+.+|++++|..|.+.|++++...+...+
T Consensus 91 ~~~l~eLi~AAnyL~I~~Lldl~c~~vA~~ikgkt 125 (141)
T 1fs1_B 91 QGTLFELILAANYLDIKGLLDVTCKTVANMIKGKT 125 (141)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCCC
Confidence 68899999999999999999999999999998887
No 23
>4ajy_C Transcription elongation factor B polypeptide 1; E3 ubiquitin ligase, transcription factor, hypoxic signaling transcription; 1.73A {Homo sapiens} PDB: 2izv_C 3dcg_B 3zrc_B* 3zrf_B 3ztc_B* 3ztd_B* 3zun_B* 2c9w_C 4awj_B* 4b95_B* 4b9k_B* 2fnj_C 1lqb_B 1lm8_C 2jz3_C 2xai_B 4b9k_E*
Probab=99.04 E-value=1.9e-10 Score=72.01 Aligned_cols=62 Identities=18% Similarity=0.198 Sum_probs=49.8
Q ss_pred ecCCHHHHHhh-c--CCCCCCCCCCCeeecccCCcHHHHHHHHHHHh-----C---CCCC---chhhHHHHHHHHHhccc
Q 044123 6 AARSSILKDCL-D--GKLLPISSTGGMTTMEVAEEGEVLKALVDFLY-----T---GSLP---REKLQKHVVGLFAAGDN 71 (148)
Q Consensus 6 aa~S~~F~~~f-~--~~~e~~~~~~~i~l~~~~~~~~~~~~~l~yiY-----t---g~~~---~~~~~~~~~~ll~~A~~ 71 (148)
|+.|++|++|| + .+.|+.. ..|++++++ +.+++.+++|+| + +.++ + +.+++.+|+.+|++
T Consensus 21 A~~S~~ik~m~~~~~~~~E~~~--~~I~l~~V~--~~iL~kViey~~~h~~~~~~~~~i~~~~i--~~~~l~eLl~AAny 94 (97)
T 4ajy_C 21 ALTSGTIKAMLSGPGQFAENET--NEVNFREIP--SHVLSKVCMYFTYKVRYTNSSTEIPEFPI--APEIALELLMAANF 94 (97)
T ss_dssp HTTSHHHHHHHCCC----------CEEECTTSC--HHHHHHHHHHHHHHHHHTTCCSCCCCCCC--CGGGHHHHHHHHHH
T ss_pred HHHhHHHHHHHHhCCCccccCC--CceECCCCC--HHHHHHHHHHHHHhcccCCCcCCCCcCcC--CHHHHHHHHHHHhh
Confidence 78999999999 5 6778777 889999999 999999999999 5 6676 6 77899999999998
Q ss_pred cc
Q 044123 72 YE 73 (148)
Q Consensus 72 ~~ 73 (148)
++
T Consensus 95 L~ 96 (97)
T 4ajy_C 95 LD 96 (97)
T ss_dssp HT
T ss_pred hC
Confidence 86
No 24
>2p1m_A SKP1-like protein 1A; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_A* 2p1o_A* 2p1p_A* 2p1q_A* 3c6n_A* 3c6o_A* 3c6p_A* 3ogk_A* 3ogl_A* 3ogm_A*
Probab=98.90 E-value=6.5e-10 Score=75.72 Aligned_cols=96 Identities=13% Similarity=0.207 Sum_probs=56.3
Q ss_pred ecCCHHHHHhh-cCCCCCCCCCCCeeecccCCcHHHHHHHHHHHhCCCCC-------------------------chhhH
Q 044123 6 AARSSILKDCL-DGKLLPISSTGGMTTMEVAEEGEVLKALVDFLYTGSLP-------------------------REKLQ 59 (148)
Q Consensus 6 aa~S~~F~~~f-~~~~e~~~~~~~i~l~~~~~~~~~~~~~l~yiYtg~~~-------------------------~~~~~ 59 (148)
|..|++|++|| +. +.. ..|++++++ ..+++.+++|+|+..-. ...+.
T Consensus 23 A~~S~~ik~ml~~~---~~~--~~Ipl~~V~--~~iL~kVieyc~~h~~~~~~~~~~~~~~~~~~~~i~~wD~~Fl~vd~ 95 (160)
T 2p1m_A 23 ALESQTIAHMVEDD---CVD--NGVPLPNVT--SKILAKVIEYCKRHVEAAASKAEAVEGAATSDDDLKAWDADFMKIDQ 95 (160)
T ss_dssp HHTCTTTC-----------------CCTTSC--HHHHHHHHHC-------------------------------------
T ss_pred HHHhHHHHHHHHcc---CCC--CceeCCcCc--HHHHHHHHHHHHHcccCCCcccccccccccccchhhHHHHHHHcCCH
Confidence 78899999999 53 223 579999999 99999999999986521 11256
Q ss_pred HHHHHHHHhccccchHHHHHHHHhhhchhcccccccccchhhHHHHHHHhhcCC
Q 044123 60 KHVVGLFAAGDNYEIEYLREVCLHHMPASFQSSNARDFQSSNAIDFLRIGYNYQ 113 (148)
Q Consensus 60 ~~~~~ll~~A~~~~i~~L~~~c~~~l~~~l~~~n~~~~~~~~~~~~~~~a~~~~ 113 (148)
+++.+|+.||++++|..|.+.|++++...+...+ +..+..++.+...+.
T Consensus 96 ~~l~eLi~AAnyL~I~~Lldl~c~~vA~~ikgkt-----~eeir~~f~I~nd~t 144 (160)
T 2p1m_A 96 ATLFELILAANYLNIKNLLDLTCQTVADMIKGKT-----PEEIRTTFNIKNDFT 144 (160)
T ss_dssp -----CHHHHHHTTCHHHHHHHHHHHHHTTTTCC-----HHHHHHHTTCCCCCC
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCC-----HHHHHHHcCCCCCCC
Confidence 7889999999999999999999999999986666 112444444444444
No 25
>2eqx_A Kelch repeat and BTB domain-containing protein 4; BACK domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.73 E-value=1e-08 Score=65.00 Aligned_cols=52 Identities=13% Similarity=0.134 Sum_probs=48.0
Q ss_pred hchhcccccccccchhhHHHHHHHhhcCChHHHHHHHHHHHHHchHHhhcchhHHHHHhh
Q 044123 85 MPASFQSSNARDFQSSNAIDFLRIGYNYQLDELRDAALNFIVKKVEELVFSDKYEESASE 144 (148)
Q Consensus 85 l~~~l~~~n~~~~~~~~~~~~~~~a~~~~~~~L~~~~~~~i~~~~~~~~~~~~f~~l~~~ 144 (148)
+.++++++| |+.++.+|..|+++.|.+.|.+||.+||.++.++++|.+|+.+
T Consensus 4 ~~~~L~~~N--------Cl~i~~~A~~~~~~~L~~~a~~fi~~nF~~v~~~~eFl~L~~~ 55 (105)
T 2eqx_A 4 GSSGVQVGN--------CLQVMWLADRHSDPELYTAAKHCAKTHLAQLQNTEEFLHLPHR 55 (105)
T ss_dssp CCCCCCTTT--------HHHHHHHHHHTTCHHHHHHHHHHHHHTCHHHHTSHHHHHSCHH
T ss_pred hhccCCHHH--------HHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcccHhhCCHH
Confidence 456788888 9999999999999999999999999999999999999998764
No 26
>3v7d_A Suppressor of kinetochore protein 1; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_A* 3mks_A*
Probab=98.35 E-value=1.9e-06 Score=59.02 Aligned_cols=84 Identities=18% Similarity=0.115 Sum_probs=63.7
Q ss_pred ecCCHHHHHhh-cCCC----CCCCCCCCeeecccCCcHHHHHHHHHHHhCCCCC-----------------------chh
Q 044123 6 AARSSILKDCL-DGKL----LPISSTGGMTTMEVAEEGEVLKALVDFLYTGSLP-----------------------REK 57 (148)
Q Consensus 6 aa~S~~F~~~f-~~~~----e~~~~~~~i~l~~~~~~~~~~~~~l~yiYtg~~~-----------------------~~~ 57 (148)
|..|..++.|+ +.-. +... ..|++++++ ..+++.+++|++.-.-. ...
T Consensus 26 A~~S~tIk~ml~~~~~~~~~~~~~--~~IplpnV~--s~iL~kVieyc~~h~~~~~~~~~~~~~~~~~~i~~wD~~Fl~v 101 (169)
T 3v7d_A 26 AERSLLLKNYLNDMGDDDDEDDDE--IVMPVPNVR--SSVLQKVIEWAEHHRDSNFPDEDDDDSRKSAPVDSWDREFLKV 101 (169)
T ss_dssp HTTSHHHHHHHHC-------------CEEECTTCC--HHHHHHHHHHHHHTTTCCCCC--------CCCCCHHHHHHTCS
T ss_pred HHHhHHHHHHHHhcCcccccccCC--CceeeCCCC--HHHHHHHHHHHHHcccCCCcccccccccccccccHHHHHHHcC
Confidence 66799999999 4322 1223 569999999 99999999999763211 012
Q ss_pred hHHHHHHHHHhccccchHHHHHHHHhhhchhccccc
Q 044123 58 LQKHVVGLFAAGDNYEIEYLREVCLHHMPASFQSSN 93 (148)
Q Consensus 58 ~~~~~~~ll~~A~~~~i~~L~~~c~~~l~~~l~~~n 93 (148)
+...+.+|+.||++++|..|.+.|+..+...+...+
T Consensus 102 d~~~LfeLi~AAnyLdIk~Lldl~c~~vA~~ikgkt 137 (169)
T 3v7d_A 102 DQEMLYEIILAANYLNIKPLLDAGCKVVAEMIRGRS 137 (169)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCC
T ss_pred CHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHcCCC
Confidence 447899999999999999999999999988777666
No 27
>1hv2_A Elongin C, ELC1; protein-peptide complex, signaling protein; NMR {Saccharomyces cerevisiae} SCOP: d.42.1.1
Probab=98.14 E-value=2.2e-06 Score=53.53 Aligned_cols=64 Identities=22% Similarity=0.265 Sum_probs=50.4
Q ss_pred ecCCHHHHHhh-cCCCCCCCCCCCeeecccCCcHHHHHHHHHHHhCCC-----------CCc-hhhHHHHHHHHHhcccc
Q 044123 6 AARSSILKDCL-DGKLLPISSTGGMTTMEVAEEGEVLKALVDFLYTGS-----------LPR-EKLQKHVVGLFAAGDNY 72 (148)
Q Consensus 6 aa~S~~F~~~f-~~~~e~~~~~~~i~l~~~~~~~~~~~~~l~yiYtg~-----------~~~-~~~~~~~~~ll~~A~~~ 72 (148)
|..|..++.|+ +++ |+.. ..|++++++ ..+++.+++|+|.-. ++. ..+.+.+.+|+.||+++
T Consensus 23 A~~S~~ik~ml~~~~-e~~~--~~Iplp~V~--~~iL~kVieyc~~h~~~~~~~~~~~~i~~w~vd~~~lfeLi~AAnyL 97 (99)
T 1hv2_A 23 AMISPTLKAMIEGPF-RESK--GRIELKQFD--SHILEKAVEYLNYNLKYSGVSEDDDEIPEFEIPTEMSLELLLAADYL 97 (99)
T ss_dssp HTTCHHHHHHHHSST-TTCT--TEEEETTSC--HHHHHHHHHHHHHHHHHHHHCSSCSSCCCCCCCHHHHHHHHHHHHHH
T ss_pred HHHhHHHHHHHhccc-ccCC--CceecCCcC--HHHHHHHHHHHHHhcccCCCccccccCCCccCCHHHHHHHHHHHHHh
Confidence 67899999999 755 5554 679999999 999999999998622 111 12567899999999988
Q ss_pred ch
Q 044123 73 EI 74 (148)
Q Consensus 73 ~i 74 (148)
+|
T Consensus 98 dI 99 (99)
T 1hv2_A 98 SI 99 (99)
T ss_dssp CC
T ss_pred Cc
Confidence 65
No 28
>2fnj_C Transcription elongation factor B polypeptide 1; beta-sandwich, lectin-like, SPRY, protein transport/signaling protein complex; 1.80A {Mus musculus} SCOP: d.42.1.1 PDB: 1lqb_B 1lm8_C 2jz3_C 2xai_B 2c9w_C 2izv_C 3dcg_B 3zrc_B* 3zrf_B
Probab=98.11 E-value=1e-06 Score=54.76 Aligned_cols=65 Identities=15% Similarity=0.156 Sum_probs=46.5
Q ss_pred ecCCHHHHHhh-c--CCCCCCCCCCCeeecccCCcHHHHHHHHHHHhCCC--------CCc-hhhHHHHHHHHHhccccc
Q 044123 6 AARSSILKDCL-D--GKLLPISSTGGMTTMEVAEEGEVLKALVDFLYTGS--------LPR-EKLQKHVVGLFAAGDNYE 73 (148)
Q Consensus 6 aa~S~~F~~~f-~--~~~e~~~~~~~i~l~~~~~~~~~~~~~l~yiYtg~--------~~~-~~~~~~~~~ll~~A~~~~ 73 (148)
|..|.+++.|+ + .+.|+.. ..|++++++ ..+++.+++|+|.-. ++. ..+.+.+.+|+.||++++
T Consensus 20 A~~S~~ik~ml~~~~~~~e~~~--~~Ipl~~V~--~~iL~kVieyc~~h~~~~~~~~~i~~w~vd~~~l~eLi~AAnyLd 95 (96)
T 2fnj_C 20 ALTSGTIKAMLSGPGQFAENET--NEVNFREIP--SHVLSKVCMYFTYKVRYTNSSTEIPEFPIAPEIALELLMAANFLD 95 (96)
T ss_dssp HTTSHHHHHHHHCC----------CEEECSSCC--HHHHHHHHHHHHHHHHHHSCCSCCCCCCCCTTTHHHHHHHHHHHT
T ss_pred HHHhHHHHHHHHccCCcccccC--CceeCCCCC--HHHHHHHHHHHHHccccCCCcccCCCcccCHHHHHHHHHHHHHhC
Confidence 67899999999 3 3356655 789999999 999999999997621 111 125578999999999886
Q ss_pred h
Q 044123 74 I 74 (148)
Q Consensus 74 i 74 (148)
|
T Consensus 96 I 96 (96)
T 2fnj_C 96 C 96 (96)
T ss_dssp C
T ss_pred c
Confidence 4
No 29
>1vcb_B Protein (elongin C); tumor suppressor, cancer, ubiquitin, beta sandwich, transcription, transcriptional elongation; 2.70A {Homo sapiens} SCOP: d.42.1.1
Probab=97.73 E-value=1.7e-05 Score=50.58 Aligned_cols=66 Identities=17% Similarity=0.190 Sum_probs=47.0
Q ss_pred eecCCHHHHHhh-c--CCCCCCCCCCCeeecccCCcHHHHHHHHHHHhCC--------CCCc-hhhHHHHHHHHHhcccc
Q 044123 5 HAARSSILKDCL-D--GKLLPISSTGGMTTMEVAEEGEVLKALVDFLYTG--------SLPR-EKLQKHVVGLFAAGDNY 72 (148)
Q Consensus 5 Laa~S~~F~~~f-~--~~~e~~~~~~~i~l~~~~~~~~~~~~~l~yiYtg--------~~~~-~~~~~~~~~ll~~A~~~ 72 (148)
.|..|..++.|+ + .+.|+.. ..|++++++ ..+++.+++|++.- .++. ..+.+.+.+|+.+|+++
T Consensus 35 ~A~~S~tIk~ml~~~~~~~e~~~--~~IplpnV~--s~iL~kVieyc~~h~~~~~~~~~i~~w~vd~~~lfeLi~AAnyL 110 (112)
T 1vcb_B 35 HALTSGTIKAMLSGPGQFAENET--NEVNFREIP--SHVLSKVCMYFTYKVRYTNSSTEIPEFPIAPEIALELLMAANFL 110 (112)
T ss_dssp HHHTSHHHHHHSSCC----------CEEECSSCC--HHHHHHHHHHHHHHHHHSSCSSCCCCCCCCHHHHHHHHHHHHHH
T ss_pred HHHHhHHHHHHHHhcCCcccccC--CceeCCCCC--HHHHHHHHHHHHHhhhccCCcCCCCCcccCHHHHHHHHHHHHHh
Confidence 356899999999 3 3345544 679999999 99999999999652 1111 12668999999999998
Q ss_pred ch
Q 044123 73 EI 74 (148)
Q Consensus 73 ~i 74 (148)
+|
T Consensus 111 dI 112 (112)
T 1vcb_B 111 DC 112 (112)
T ss_dssp TC
T ss_pred Cc
Confidence 75
No 30
>3drz_A BTB/POZ domain-containing protein KCTD5; potassium channel domain T1, pentamer, unkno function; 1.90A {Homo sapiens}
Probab=97.68 E-value=9.4e-05 Score=46.67 Aligned_cols=74 Identities=16% Similarity=0.174 Sum_probs=54.0
Q ss_pred HHHHHhh-cCCC--CCCCCCCCeeecccCCcHHHHHHHHHHHhCCCCCchhhHHHHHHHHHhccccchHHHHHHHHhhhc
Q 044123 10 SILKDCL-DGKL--LPISSTGGMTTMEVAEEGEVLKALVDFLYTGSLPREKLQKHVVGLFAAGDNYEIEYLREVCLHHMP 86 (148)
Q Consensus 10 ~~F~~~f-~~~~--e~~~~~~~i~l~~~~~~~~~~~~~l~yiYtg~~~~~~~~~~~~~ll~~A~~~~i~~L~~~c~~~l~ 86 (148)
.+|.+|| ++.. ........+-+ |-+ |..|+.+|+|+.+|++..+.+ -....+++-|++|+++.|++.|.+.|.
T Consensus 30 s~L~~~~~~~~~~~~~~d~~~~~fi-DRd--p~~F~~IL~~lr~g~l~~p~~-~~~~~l~~Ea~fy~l~~L~~~l~~~i~ 105 (107)
T 3drz_A 30 SFLYRLCQADPDLDSDKDETGAYLI-DRD--PTYFGPVLNYLRHGKLVINKD-LAEEGVLEEAEFYNITSLIKLVKDKIR 105 (107)
T ss_dssp SHHHHHHTTCGGGGGGBCTTSCEEE-CSC--HHHHHHHHHHHHHSCCCCCTT-SCHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred cchhHHHhcCCCCCcCCCCCceEEe-cCC--hHHHHHHHHHhCCCeeCCCCC-CCHHHHHHHHHHCCCHHHHHHHHHHHh
Confidence 4788888 5421 11111144555 678 999999999999999876322 234678999999999999999998876
Q ss_pred h
Q 044123 87 A 87 (148)
Q Consensus 87 ~ 87 (148)
+
T Consensus 106 ~ 106 (107)
T 3drz_A 106 E 106 (107)
T ss_dssp H
T ss_pred c
Confidence 4
No 31
>3drx_A BTB/POZ domain-containing protein KCTD5; golgi, grAsp55, potassium channel domain T1, pentameric assembly, HOST-virus interaction, nucleus; 3.11A {Homo sapiens} PDB: 3dry_A
Probab=96.27 E-value=0.0045 Score=43.23 Aligned_cols=75 Identities=16% Similarity=0.170 Sum_probs=53.4
Q ss_pred HHHHHhh-cCC--CCCCCCCCCeeecccCCcHHHHHHHHHHHhCCCCCchhhHHHHHHHHHhccccchHHHHHHHHhhhc
Q 044123 10 SILKDCL-DGK--LLPISSTGGMTTMEVAEEGEVLKALVDFLYTGSLPREKLQKHVVGLFAAGDNYEIEYLREVCLHHMP 86 (148)
Q Consensus 10 ~~F~~~f-~~~--~e~~~~~~~i~l~~~~~~~~~~~~~l~yiYtg~~~~~~~~~~~~~ll~~A~~~~i~~L~~~c~~~l~ 86 (148)
.+|.+|| +.. .......+.+-+ |-+ +..|+.+|+|+.+|.+..+.+ -....+++-|++|+|+.|.+.|.+.|.
T Consensus 36 S~L~~lfs~~~~~~~~~De~geyFI-DRD--P~~F~~ILnyLRtG~L~lP~~-~~~~~l~eEA~FygL~~Lv~~l~~~i~ 111 (202)
T 3drx_A 36 SFLYRLCQADPDLDSDKDETGAYLI-DRD--PTYFGPVLNYLRHGKLVINKD-LAEEGVLEEAEFYNITSLIKLVKDKIR 111 (202)
T ss_dssp SSTHHHHSCCCC----BCTTCCEEE-CSC--STTHHHHHHHHHHSCCCCCTT-SCHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred chHHHHhcCccccCcccCCCccEEe-cCC--hHHHHHHHHHhcCCccCCCCC-CCHHHHHHHHHHCCcHHHHHHHHHHHH
Confidence 3677888 442 111111144555 568 999999999999999976322 223568999999999999999999887
Q ss_pred hh
Q 044123 87 AS 88 (148)
Q Consensus 87 ~~ 88 (148)
+.
T Consensus 112 er 113 (202)
T 3drx_A 112 ER 113 (202)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 32
>2vkp_A BTB/POZ domain-containing protein 6; protein-binding; 1.9A {Homo sapiens}
Probab=91.18 E-value=0.22 Score=30.40 Aligned_cols=27 Identities=22% Similarity=0.353 Sum_probs=25.9
Q ss_pred HHHHHHHhhcCChHHHHHHHHHHHHHc
Q 044123 102 AIDFLRIGYNYQLDELRDAALNFIVKK 128 (148)
Q Consensus 102 ~~~~~~~a~~~~~~~L~~~~~~~i~~~ 128 (148)
+.+++..|..++.+.|++.|.+|+.++
T Consensus 82 ~~~ll~~A~~~~~~~L~~~c~~~l~~~ 108 (109)
T 2vkp_A 82 VLATLYAAKKYIVPALAKACVNFLETS 108 (109)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCcHHHHHHHHHHHHhh
Confidence 999999999999999999999999876
No 33
>1s1g_A Potassium voltage-gated channel subfamily D membe; K+ channels, tetramerization domain, T1 domain, transport PR; 2.60A {Homo sapiens} SCOP: d.42.1.2
Probab=91.15 E-value=0.079 Score=34.02 Aligned_cols=51 Identities=18% Similarity=0.169 Sum_probs=38.9
Q ss_pred CCeeecccCCcHHHHHHHHHHHhCCCCCchhhHHHHHHHHHhccccchHHHH-HHH
Q 044123 27 GGMTTMEVAEEGEVLKALVDFLYTGSLPREKLQKHVVGLFAAGDNYEIEYLR-EVC 81 (148)
Q Consensus 27 ~~i~l~~~~~~~~~~~~~l~yiYtg~~~~~~~~~~~~~ll~~A~~~~i~~L~-~~c 81 (148)
+.+-+ |=+ +..|+.+|+|+.+|++..+.+ -.+..+++-|++|+|+.+. +.|
T Consensus 53 g~~Fi-DRd--p~~F~~ILnflR~G~l~~p~~-~~~~~l~~Ea~fy~i~~l~l~~c 104 (124)
T 1s1g_A 53 KEYFF-DRD--PEVFRCVLNFYRTGKLHYPRY-ECISAYDDELAFYGILPEIIGDC 104 (124)
T ss_dssp CSEEE-CSC--HHHHHHHHHHHHHSCBCCCTT-SCHHHHHHHHHHTTCCGGGBCHH
T ss_pred CcEEE-cCC--hHHHHHHHHHHhcCCCCCCCC-cCHHHHHHHHHHcCCChHHHHHH
Confidence 44554 457 999999999999999876322 2467789999999999873 444
No 34
>2eqx_A Kelch repeat and BTB domain-containing protein 4; BACK domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=90.33 E-value=0.19 Score=30.95 Aligned_cols=72 Identities=10% Similarity=-0.061 Sum_probs=47.8
Q ss_pred hHHHHHHHHHhccccchHHHHHHHHhhhchhcccc--c--ccccchhhHHHHHHHhhcCChHHHHHHHHHHHHHchH
Q 044123 58 LQKHVVGLFAAGDNYEIEYLREVCLHHMPASFQSS--N--ARDFQSSNAIDFLRIGYNYQLDELRDAALNFIVKKVE 130 (148)
Q Consensus 58 ~~~~~~~ll~~A~~~~i~~L~~~c~~~l~~~l~~~--n--~~~~~~~~~~~~~~~a~~~~~~~L~~~~~~~i~~~~~ 130 (148)
+.+|...++.+|+.|+++.|++.|.+|+.+++..- + -..+.......++.- +-.+-..+.+.+.+++..+..
T Consensus 9 ~~~NCl~i~~~A~~~~~~~L~~~a~~fi~~nF~~v~~~~eFl~L~~~~L~~lL~s-dv~~E~~vf~av~~Wv~~d~~ 84 (105)
T 2eqx_A 9 QVGNCLQVMWLADRHSDPELYTAAKHCAKTHLAQLQNTEEFLHLPHRLLTDIISD-GVPCSQNPTEAIEAWINFNKE 84 (105)
T ss_dssp CTTTHHHHHHHHHHTTCHHHHHHHHHHHHHTCHHHHTSHHHHHSCHHHHHHHHHT-CEETTSCHHHHHHHHHHTTHH
T ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcccHhhCCHHHHHHHHcC-CCCCHHHHHHHHHHHHHcCHH
Confidence 66899999999999999999999999998765421 1 011112223344432 222234588888888876654
No 35
>1t1d_A Protein (potassium channel KV1.1); potassium channels, tetramerization domain, aplysia KV1.1, proton transport, membrane protein; 1.51A {Aplysia californica} SCOP: d.42.1.2 PDB: 1eod_A 1eof_A 1eoe_A 1a68_A 1qdv_A 1exb_E* 1qdw_A 1dsx_A
Probab=86.96 E-value=0.27 Score=30.24 Aligned_cols=51 Identities=16% Similarity=0.059 Sum_probs=38.2
Q ss_pred CCeeecccCCcHHHHHHHHHHHhC-CCCCchhhHHHHHHHHHhccccchHHHH-HHH
Q 044123 27 GGMTTMEVAEEGEVLKALVDFLYT-GSLPREKLQKHVVGLFAAGDNYEIEYLR-EVC 81 (148)
Q Consensus 27 ~~i~l~~~~~~~~~~~~~l~yiYt-g~~~~~~~~~~~~~ll~~A~~~~i~~L~-~~c 81 (148)
+++-+ |=+ +..|+.+|+|+.+ |++..+.+. .+..+++-|++|+|+.+. +.|
T Consensus 42 ~eyFi-DRd--p~~F~~ILnflR~~G~l~~p~~~-~~~~~~~Ea~fy~i~~~~~~~~ 94 (100)
T 1t1d_A 42 NEYFF-DRN--RPSFDAILYFYQSGGRLRRPVNV-PLDVFSEEIKFYELGENAFERY 94 (100)
T ss_dssp TEEEE-CSC--STTHHHHHHHHHTTSCCCCCTTS-CHHHHHHHHHHTTCCHHHHHHH
T ss_pred eeEEE-cCC--hHHHHHHHHHHhcCCcccCCCCC-CHHHHHHHHHHcCCCHHHHHHH
Confidence 44554 567 9999999999999 888653233 467789999999998753 444
No 36
>1r29_A B-cell lymphoma 6 protein; BTB domain, transcriptional repression, transcription; 1.30A {Homo sapiens} SCOP: d.42.1.1 PDB: 1r28_A 1r2b_A 3bim_A 3lbz_A* 3e4u_A
Probab=86.45 E-value=0.8 Score=28.74 Aligned_cols=27 Identities=15% Similarity=0.295 Sum_probs=25.5
Q ss_pred HHHHHHHhhcCChHHHHHHHHHHHHHc
Q 044123 102 AIDFLRIGYNYQLDELRDAALNFIVKK 128 (148)
Q Consensus 102 ~~~~~~~a~~~~~~~L~~~~~~~i~~~ 128 (148)
+.+++..|..++.+.|.+.|.+|+.++
T Consensus 100 ~~~ll~~A~~~~i~~L~~~c~~~l~~~ 126 (127)
T 1r29_A 100 IMAVMATAMYLQMEHVVDTCRKFIKAS 126 (127)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHhc
Confidence 999999999999999999999999764
No 37
>1nn7_A Potassium channel KV4.2; teteramerization domain, voltage gated potassium channel SHAL, membrane protein; 2.10A {Rattus norvegicus} SCOP: d.42.1.2
Probab=85.62 E-value=0.081 Score=32.91 Aligned_cols=47 Identities=11% Similarity=0.170 Sum_probs=35.8
Q ss_pred ccCCcHHHHHHHHHHHhCCCCCchhhHHHHHHHHHhccccchHHHH-HHHH
Q 044123 33 EVAEEGEVLKALVDFLYTGSLPREKLQKHVVGLFAAGDNYEIEYLR-EVCL 82 (148)
Q Consensus 33 ~~~~~~~~~~~~l~yiYtg~~~~~~~~~~~~~ll~~A~~~~i~~L~-~~c~ 82 (148)
|=+ +..|+.+|+|+-+|++..+.+ -.+..+++-|++|+|+.+. +.|+
T Consensus 45 DRd--p~~F~~ILnflR~g~l~~p~~-~~~~~l~~Ea~fy~i~~l~~~~cc 92 (105)
T 1nn7_A 45 DRD--PDIFRHILNFYRTGKLHYPRH-ECISAYDEELAFFGLIPEIIGDCC 92 (105)
T ss_dssp CSC--TTTHHHHHHHHHHSCBCCCTT-SCHHHHHHHHHHHTCCSCCBCHHH
T ss_pred eCC--cHHHHHHHHHHhcCCCCCCCC-cCHHHHHHHHHHcCCCHHHHHHHH
Confidence 457 999999999999999875323 2467788899999998763 4443
No 38
>2nz0_B Potassium voltage-gated channel subfamily D membe; KV4.3, kchip1, membrane protein; 3.20A {Homo sapiens} PDB: 2i2r_A
Probab=85.53 E-value=0.31 Score=31.94 Aligned_cols=47 Identities=17% Similarity=0.145 Sum_probs=36.3
Q ss_pred CCeeecccCCcHHHHHHHHHHHhCCCCCchhhHHHHHHHHHhccccchHHH
Q 044123 27 GGMTTMEVAEEGEVLKALVDFLYTGSLPREKLQKHVVGLFAAGDNYEIEYL 77 (148)
Q Consensus 27 ~~i~l~~~~~~~~~~~~~l~yiYtg~~~~~~~~~~~~~ll~~A~~~~i~~L 77 (148)
+.+-+ |=+ +..|+.+|+|+-+|++....+ -.+..+++-|++|+|+.+
T Consensus 75 g~yFi-DRd--p~~F~~ILnflR~G~l~~p~~-~~~~~l~eEa~fy~i~~l 121 (140)
T 2nz0_B 75 KEYFF-DRD--PEVFRCVLNFYRTGKLHYPRY-ECISAYDDELAFYGILPE 121 (140)
T ss_dssp TEEEE-CSC--HHHHHHHHHHHHHSSBCCCTT-SCHHHHHHHHHHHTCCGG
T ss_pred CeEEE-eCC--cHHHHHHHHHHhcCCcCCCCC-cCHHHHHHHHHHcCCChH
Confidence 33444 557 999999999999999875323 246778889999999886
No 39
>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens}
Probab=85.25 E-value=0.39 Score=31.74 Aligned_cols=33 Identities=6% Similarity=0.063 Sum_probs=29.0
Q ss_pred hHHHHHHHHHhccccchHHHHHHHHhhhchhcc
Q 044123 58 LQKHVVGLFAAGDNYEIEYLREVCLHHMPASFQ 90 (148)
Q Consensus 58 ~~~~~~~ll~~A~~~~i~~L~~~c~~~l~~~l~ 90 (148)
+.+++..++..|++|+.+.|++.|.+++.+++.
T Consensus 133 ~~~n~~~~~~~A~~~~~~~L~~~~~~~i~~~~~ 165 (172)
T 3htm_A 133 SVENAAEILILADLHSADQLKTQAVDFINYHAT 165 (172)
T ss_dssp CTTTHHHHHHHHHHTTCHHHHHHHHHHHHHTC-
T ss_pred CHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHH
Confidence 446899999999999999999999999988654
No 40
>2yy9_A Zinc finger and BTB domain-containing protein 48; mouse, HKR3, structural genomics, NPPSFA; 2.60A {Mus musculus}
Probab=82.66 E-value=0.5 Score=30.24 Aligned_cols=36 Identities=14% Similarity=0.087 Sum_probs=27.8
Q ss_pred cccccccccchhhHHHHHHHhhcCChHHHHHHHHHHHHHchHHh
Q 044123 89 FQSSNARDFQSSNAIDFLRIGYNYQLDELRDAALNFIVKKVEEL 132 (148)
Q Consensus 89 l~~~n~~~~~~~~~~~~~~~a~~~~~~~L~~~~~~~i~~~~~~~ 132 (148)
++.+| +.+++..|..++.+.|.+.|.+|+.+++..-
T Consensus 87 i~~~~--------v~~ll~~A~~l~i~~L~~~C~~~l~~~l~~~ 122 (135)
T 2yy9_A 87 LTSGN--------RDQVLLAAKELRVPEAVELCQSFQPQTSVGQ 122 (135)
T ss_dssp CCTTT--------HHHHHHHHHHTTCHHHHHHHHHCCC------
T ss_pred CCHHH--------HHHHHHHHHHhCcHHHHHHHHHHHHHhccCC
Confidence 55667 9999999999999999999999999887654
No 41
>2vpk_A Myoneurin; transcription regulation, transcription, metal-binding, alternative splicing, zinc, nucleus, BTB domain, zinc-finger, DNA-binding; 2.00A {Homo sapiens}
Probab=81.48 E-value=1.3 Score=27.31 Aligned_cols=25 Identities=4% Similarity=-0.015 Sum_probs=23.8
Q ss_pred HHHHHHHhhcCChHHHHHHHHHHHH
Q 044123 102 AIDFLRIGYNYQLDELRDAALNFIV 126 (148)
Q Consensus 102 ~~~~~~~a~~~~~~~L~~~~~~~i~ 126 (148)
+.+++..|..++.+.|.+.|.+|+.
T Consensus 91 v~~ll~~A~~~~i~~L~~~C~~~l~ 115 (116)
T 2vpk_A 91 VKEIHQAADYLKVEEVVTKCKIKME 115 (116)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHC
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 9999999999999999999999874
No 42
>2z8h_A Transcription regulator protein BACH1; BTB, POZ, disulfide bond, activator, DNA-binding, nucleus, phosphorylation, repressor; 2.50A {Mus musculus}
Probab=81.34 E-value=0.42 Score=30.68 Aligned_cols=29 Identities=10% Similarity=0.127 Sum_probs=27.0
Q ss_pred HHHHHHHhhcCChHHHHHHHHHHHHHchH
Q 044123 102 AIDFLRIGYNYQLDELRDAALNFIVKKVE 130 (148)
Q Consensus 102 ~~~~~~~a~~~~~~~L~~~~~~~i~~~~~ 130 (148)
+.+++..|..++.+.|.+.|.+|+..++.
T Consensus 106 v~~ll~~A~~~~i~~L~~~C~~~l~~~l~ 134 (138)
T 2z8h_A 106 VDEVCRCVEFLSVHNIEESCFQFLKFKFL 134 (138)
T ss_dssp HHHHHHHHHHHTCGGGHHHHHHHTTCCCS
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHhcc
Confidence 99999999999999999999999987654
No 43
>2q81_A MIZ-1 protein; BTB/POZ domain, transcription; HET: PG4; 2.10A {Homo sapiens} PDB: 3m52_A
Probab=81.33 E-value=1.7 Score=26.93 Aligned_cols=25 Identities=16% Similarity=0.165 Sum_probs=23.9
Q ss_pred HHHHHHHhhcCChHHHHHHHHHHHH
Q 044123 102 AIDFLRIGYNYQLDELRDAALNFIV 126 (148)
Q Consensus 102 ~~~~~~~a~~~~~~~L~~~~~~~i~ 126 (148)
+.+++..|..++.+.|.+.|.+|+.
T Consensus 93 ~~~ll~~A~~l~i~~L~~~C~~~l~ 117 (119)
T 2q81_A 93 VDDVLAVATFLQMQDIITACHALKS 117 (119)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 9999999999999999999999874
No 44
>3b84_A Zinc finger and BTB domain-containing protein 48; krueppel related zinc finger protein 3, HKR3, ZBTB48, Z finger, oncogene; 1.74A {Homo sapiens}
Probab=80.60 E-value=0.89 Score=28.28 Aligned_cols=27 Identities=15% Similarity=0.100 Sum_probs=23.4
Q ss_pred HHHHHHHhhcCChHHHHHHHHHHHHHc
Q 044123 102 AIDFLRIGYNYQLDELRDAALNFIVKK 128 (148)
Q Consensus 102 ~~~~~~~a~~~~~~~L~~~~~~~i~~~ 128 (148)
+.+++..|..++.+.|.+.|.+|+.++
T Consensus 91 v~~ll~~A~~~~i~~L~~~C~~~l~~~ 117 (119)
T 3b84_A 91 RDQVLLAARELRVPEAVELCQSFKPKT 117 (119)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHCC---
T ss_pred HHHHHHHHHHhCcHHHHHHHHHHHHHc
Confidence 999999999999999999999998764
No 45
>3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A
Probab=79.74 E-value=0.77 Score=33.51 Aligned_cols=33 Identities=6% Similarity=0.063 Sum_probs=28.9
Q ss_pred hHHHHHHHHHhccccchHHHHHHHHhhhchhcc
Q 044123 58 LQKHVVGLFAAGDNYEIEYLREVCLHHMPASFQ 90 (148)
Q Consensus 58 ~~~~~~~ll~~A~~~~i~~L~~~c~~~l~~~l~ 90 (148)
+.+++..++.+|++|.++.|++.|.+++..++.
T Consensus 273 ~~~n~~~~l~~A~~~~~~~L~~~~~~~i~~~~~ 305 (312)
T 3hqi_A 273 SVENAAEILILADLHSADQLKTQAVDFINYHAT 305 (312)
T ss_dssp CTTTHHHHHHHHHHTTCHHHHHHHHHHHHHTC-
T ss_pred CHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 446899999999999999999999999988654
No 46
>1buo_A POZ domain, protein (promyelocytic leukemia zinc finger prote; protein-protein interaction domain, transcriptional represso finger protein; 1.90A {Homo sapiens} SCOP: d.42.1.1 PDB: 1cs3_A
Probab=77.77 E-value=2.1 Score=26.51 Aligned_cols=27 Identities=15% Similarity=0.191 Sum_probs=25.2
Q ss_pred HHHHHHHhhcCChHHHHHHHHHHHHHc
Q 044123 102 AIDFLRIGYNYQLDELRDAALNFIVKK 128 (148)
Q Consensus 102 ~~~~~~~a~~~~~~~L~~~~~~~i~~~ 128 (148)
+.+++..|..++.+.|++.|.+++.+.
T Consensus 94 ~~~ll~~A~~~~i~~L~~~c~~~l~~~ 120 (121)
T 1buo_A 94 LDDLLYAAEILEIEYLEEQCLKMLETI 120 (121)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCHHHHHHHHHHHHHh
Confidence 999999999999999999999998753
No 47
>2if5_A Zinc finger and BTB domain-containing protein 7A; POZ domain, POK, proto oncogene, transcription F transcription; 2.00A {Homo sapiens} PDB: 2nn2_A
Probab=76.39 E-value=2.8 Score=25.79 Aligned_cols=24 Identities=8% Similarity=0.171 Sum_probs=23.0
Q ss_pred HHHHHHHhhcCChHHHHHHHHHHH
Q 044123 102 AIDFLRIGYNYQLDELRDAALNFI 125 (148)
Q Consensus 102 ~~~~~~~a~~~~~~~L~~~~~~~i 125 (148)
+.+++..|..++.+.|.+.|.+|+
T Consensus 96 ~~~ll~~A~~~~i~~L~~~C~~~L 119 (120)
T 2if5_A 96 VGDILSAARLLEIPAVSHVCADLL 119 (120)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHh
Confidence 999999999999999999999886
No 48
>3kvt_A Potassium channel protein SHAW; tetramerization domain, molecular recogni zinc-binding; 2.00A {Aplysia californica} SCOP: d.42.1.2
Probab=74.94 E-value=0.56 Score=29.57 Aligned_cols=47 Identities=6% Similarity=-0.010 Sum_probs=35.8
Q ss_pred CCeeecccCCcHHHHHHHHHHHhCCCCCchhhHHHHHHHHHhccccchHHH
Q 044123 27 GGMTTMEVAEEGEVLKALVDFLYTGSLPREKLQKHVVGLFAAGDNYEIEYL 77 (148)
Q Consensus 27 ~~i~l~~~~~~~~~~~~~l~yiYtg~~~~~~~~~~~~~ll~~A~~~~i~~L 77 (148)
+.+-+ |=+ +..|+.+|+|+.+|++..+.+ -....+++-|.+|+|+..
T Consensus 46 g~~Fi-DRd--p~~F~~ILnylR~G~l~~p~~-~~~~~~~~Ea~fy~i~~~ 92 (115)
T 3kvt_A 46 NEYFF-DRH--PGVFAQIINYYRSGKLHYPTD-VCGPLFEEELEFWGLDSN 92 (115)
T ss_dssp TEEEE-CSC--TTTHHHHHHHHHHSCBCCCSS-SCHHHHHHHHHHHTCCGG
T ss_pred CcEEE-ecC--hHHHHHHHHHhcCCCCCCCCc-ccHHHHHHHHHHhCCChH
Confidence 34444 567 999999999999999866322 235678889999999874
No 49
>2ppi_A Gigaxonin; BTB domain, protein degradation, structural genomics, struct genomics consortium, SGC, structural protein; 2.40A {Homo sapiens}
Probab=69.94 E-value=2.1 Score=27.55 Aligned_cols=24 Identities=17% Similarity=0.274 Sum_probs=22.8
Q ss_pred HHHHHHHhhcCChHHHHHHHHHHH
Q 044123 102 AIDFLRIGYNYQLDELRDAALNFI 125 (148)
Q Consensus 102 ~~~~~~~a~~~~~~~L~~~~~~~i 125 (148)
+.+++..|..++.+.|++.|.+|+
T Consensus 120 v~~ll~~A~~l~i~~L~~~C~~~L 143 (144)
T 2ppi_A 120 IQDVVQAADLLLLTDLKTLCCEFL 143 (144)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHTTC
T ss_pred HHHHHHHHHHhCcHHHHHHHHHHh
Confidence 999999999999999999998875
No 50
>4eoz_A Speckle-type POZ protein; E3 ubiquitin ligase, nucleus, protein binding; 2.40A {Homo sapiens}
Probab=69.29 E-value=2.3 Score=26.99 Aligned_cols=28 Identities=21% Similarity=0.326 Sum_probs=22.6
Q ss_pred HHHHHHHhhcCChHHHHHHHHHHHHHch
Q 044123 102 AIDFLRIGYNYQLDELRDAALNFIVKKV 129 (148)
Q Consensus 102 ~~~~~~~a~~~~~~~L~~~~~~~i~~~~ 129 (148)
+.+++..|..++.+.|.+.|.+++.+++
T Consensus 96 ~~~ll~~A~~~~~~~l~~~c~~~l~~~l 123 (145)
T 4eoz_A 96 ADDLLAAADKYALERLKVMCEDALCSNL 123 (145)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHCC-----
T ss_pred HHHHHHHHHHhCHHHHHHHHHHHHHHhC
Confidence 9999999999999999999999998654
No 51
>3m5b_A Zinc finger and BTB domain-containing protein 32; POZ domain, BTB/POZ domain, ZBTB32, zinc finger domain-containing protein 32; 2.00A {Homo sapiens} SCOP: d.42.1.0
Probab=69.26 E-value=3.6 Score=25.59 Aligned_cols=26 Identities=8% Similarity=-0.022 Sum_probs=23.2
Q ss_pred HHHHHHHhhcCChHHHHHHHHHHHHH
Q 044123 102 AIDFLRIGYNYQLDELRDAALNFIVK 127 (148)
Q Consensus 102 ~~~~~~~a~~~~~~~L~~~~~~~i~~ 127 (148)
+.+++..|..+..+.|.+.|.++++.
T Consensus 92 v~~ll~aA~~l~i~~l~~~C~~~~~~ 117 (119)
T 3m5b_A 92 LRPLQEAARALGVQSLEEACWRARGD 117 (119)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHC--
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHhh
Confidence 99999999999999999999998764
No 52
>2plx_B Peptide inhibitor; helix-turn-helix, hydrolase; HET: FLC; 1.56A {Bos taurus}
Probab=67.82 E-value=6.7 Score=17.08 Aligned_cols=20 Identities=15% Similarity=0.102 Sum_probs=16.8
Q ss_pred HHHHHhhcCChHHHHHHHHH
Q 044123 104 DFLRIGYNYQLDELRDAALN 123 (148)
Q Consensus 104 ~~~~~a~~~~~~~L~~~~~~ 123 (148)
.++.+|..|+.++|..+|++
T Consensus 3 kvmcyaqrhsspellrrcld 22 (26)
T 2plx_B 3 KVMCYAQRHSSPELLRRCLD 22 (26)
T ss_dssp HHHHHHBCCCCHHHHHHHHH
T ss_pred eEEeehhhcCCHHHHHHHHh
Confidence 46778899999999998876
No 53
>3i3n_A Kelch-like protein 11; structural genomics, BTB, KLHL11A, SGC, structural genomics consortium, kelch repeat, secreted, protein binding; 2.60A {Homo sapiens} PDB: 4ap2_A* 4apf_A
Probab=61.12 E-value=7.6 Score=27.68 Aligned_cols=27 Identities=22% Similarity=0.354 Sum_probs=25.7
Q ss_pred HHHHHHHhhcCChHHHHHHHHHHHHHc
Q 044123 102 AIDFLRIGYNYQLDELRDAALNFIVKK 128 (148)
Q Consensus 102 ~~~~~~~a~~~~~~~L~~~~~~~i~~~ 128 (148)
+..++..|..++.+.|.+.|.+|+.++
T Consensus 112 v~~ll~~A~~l~i~~L~~~c~~~L~~~ 138 (279)
T 3i3n_A 112 VHEVLELADRFLLIRLKEFCGEFLKKK 138 (279)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCcHHHHHHHHHHHHHc
Confidence 999999999999999999999999864
No 54
>3hve_A Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, disease mutation, kelch repeat, neurodegeneration, phosphoprotein, polymorphism, UBL conjugation; 2.80A {Homo sapiens} PDB: 3hve_B
Probab=58.97 E-value=7.6 Score=27.25 Aligned_cols=33 Identities=12% Similarity=0.212 Sum_probs=28.8
Q ss_pred cccccccccchhhHHHHHHHhhcCChHHHHHHHHHHHHHch
Q 044123 89 FQSSNARDFQSSNAIDFLRIGYNYQLDELRDAALNFIVKKV 129 (148)
Q Consensus 89 l~~~n~~~~~~~~~~~~~~~a~~~~~~~L~~~~~~~i~~~~ 129 (148)
++.+| +..++..|..++.+.|.+.|.+|+..++
T Consensus 99 i~~~~--------v~~ll~~A~~l~i~~l~~~c~~~L~~~l 131 (256)
T 3hve_A 99 LNEDT--------IQDVVQAADLLLLTDLKTLCCEFLEGCI 131 (256)
T ss_dssp CC-CC--------HHHHHHHHHHHTCHHHHHHHHHHHHHTC
T ss_pred ccHhH--------HHHHHHHHHHHChHHHHHHHHHHHHhhC
Confidence 55677 9999999999999999999999998653
No 55
>3ga1_A Nucleus accumbens-associated protein 1; BTB/POZ domain, phosphoprotein, repressor, transcri transcription regulation; 2.10A {Homo sapiens}
Probab=57.86 E-value=1.5 Score=27.64 Aligned_cols=27 Identities=15% Similarity=0.158 Sum_probs=18.6
Q ss_pred HHHHHHHhhcCChHHHHHHHHHHHHHc
Q 044123 102 AIDFLRIGYNYQLDELRDAALNFIVKK 128 (148)
Q Consensus 102 ~~~~~~~a~~~~~~~L~~~~~~~i~~~ 128 (148)
+..++..|..++.+.|.+.|.+|+.+.
T Consensus 101 ~~~ll~~A~~~~i~~l~~~C~~~L~~~ 127 (129)
T 3ga1_A 101 QDLLMYTAGFLQIQEIMEKGTEFFLKV 127 (129)
T ss_dssp HHHHHHHHHHTTBTTSSCC--------
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHh
Confidence 999999999999999999999998764
No 56
>1fs1_B SKP1, cyclin A/CDK2-associated P45; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.157.1.1 d.42.1.1 PDB: 1fs2_B 1ldk_D
Probab=51.58 E-value=20 Score=22.90 Aligned_cols=35 Identities=6% Similarity=0.172 Sum_probs=30.5
Q ss_pred cccccccccchhhHHHHHHHhhcCChHHHHHHHHHHHHHchHH
Q 044123 89 FQSSNARDFQSSNAIDFLRIGYNYQLDELRDAALNFIVKKVEE 131 (148)
Q Consensus 89 l~~~n~~~~~~~~~~~~~~~a~~~~~~~L~~~~~~~i~~~~~~ 131 (148)
++.++ +.+++..|.-.+.+.|.+.|.++++.....
T Consensus 89 vd~~~--------l~eLi~AAnyL~I~~Lldl~c~~vA~~ikg 123 (141)
T 1fs1_B 89 VDQGT--------LFELILAANYLDIKGLLDVTCKTVANMIKG 123 (141)
T ss_dssp SCHHH--------HHHHHHHHHHHTCHHHHHHHHHHHHHHHTT
T ss_pred CCHHH--------HHHHHHHHHHHhhhHHHHHHHHHHHHHHcC
Confidence 66667 999999999999999999999999876543
No 57
>2ast_A S-phase kinase-associated protein 1A; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} PDB: 2ass_A* 2e31_B 2e32_B 3l2o_A 1p22_B* 2ovr_A* 2ovp_A 1fqv_B* 2ovq_A*
Probab=51.45 E-value=17 Score=23.67 Aligned_cols=29 Identities=7% Similarity=0.193 Sum_probs=26.3
Q ss_pred HHHHHHHhhcCChHHHHHHHHHHHHHchH
Q 044123 102 AIDFLRIGYNYQLDELRDAALNFIVKKVE 130 (148)
Q Consensus 102 ~~~~~~~a~~~~~~~L~~~~~~~i~~~~~ 130 (148)
+.+++..|.-.+...|.+.|.++++..+.
T Consensus 99 l~eLl~AAnyL~I~~Lld~~c~~va~~i~ 127 (159)
T 2ast_A 99 LFELILAANYLDIKGLLDVTCKTVANMIK 127 (159)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHc
Confidence 99999999999999999999999986543
No 58
>2cmy_B Beta trypsin, veronica hederifolia trypsin inhibitor; acyl-enzyme intermediate, serine protease inhibitor, zymogen protease, digestion; 2.25A {Veronica hederifolia} SCOP: g.2.4.1
Probab=42.89 E-value=19 Score=16.62 Aligned_cols=22 Identities=14% Similarity=0.030 Sum_probs=16.3
Q ss_pred HHHHHHhhcCChHHHHHHHHHH
Q 044123 103 IDFLRIGYNYQLDELRDAALNF 124 (148)
Q Consensus 103 ~~~~~~a~~~~~~~L~~~~~~~ 124 (148)
+.++.+|..++.++|..+|++-
T Consensus 7 ckvmcyaqrhsspellrrcldn 28 (34)
T 2cmy_B 7 CKVMCYAQRHSSPELLRRCLDN 28 (34)
T ss_dssp CHHHHHHBC--CCHHHHHHHHH
T ss_pred hhHHHHHhhcCCHHHHHHHHHh
Confidence 5677889999999999988763
No 59
>2p1m_A SKP1-like protein 1A; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_A* 2p1o_A* 2p1p_A* 2p1q_A* 3c6n_A* 3c6o_A* 3c6p_A* 3ogk_A* 3ogl_A* 3ogm_A*
Probab=38.77 E-value=23 Score=23.20 Aligned_cols=34 Identities=6% Similarity=0.199 Sum_probs=23.7
Q ss_pred cccccccccchhhHHHHHHHhhcCChHHHHHHHHHHHHHchH
Q 044123 89 FQSSNARDFQSSNAIDFLRIGYNYQLDELRDAALNFIVKKVE 130 (148)
Q Consensus 89 l~~~n~~~~~~~~~~~~~~~a~~~~~~~L~~~~~~~i~~~~~ 130 (148)
++.++ +.+++..|.-.+.+.|.+.|.++++....
T Consensus 93 vd~~~--------l~eLi~AAnyL~I~~Lldl~c~~vA~~ik 126 (160)
T 2p1m_A 93 IDQAT--------LFELILAANYLNIKNLLDLTCQTVADMIK 126 (160)
T ss_dssp ----------------CHHHHHHTTCHHHHHHHHHHHHHTTT
T ss_pred CCHHH--------HHHHHHHHHHHhHHHHHHHHHHHHHHHHc
Confidence 66667 99999999999999999999999986553
No 60
>3b0b_B CENP-S, centromere protein S; histone fold, DNA binding, DNA, nucleus, DNA binding protein; 2.15A {Gallus gallus}
Probab=35.98 E-value=20 Score=22.08 Aligned_cols=78 Identities=10% Similarity=0.073 Sum_probs=40.8
Q ss_pred HHHHHHHHhccccchHHHHHHHHhhhchhcccccccccchhhHHHHHHHhhcCChHHHHHHHHHHHHHchHHhhcchhHH
Q 044123 60 KHVVGLFAAGDNYEIEYLREVCLHHMPASFQSSNARDFQSSNAIDFLRIGYNYQLDELRDAALNFIVKKVEELVFSDKYE 139 (148)
Q Consensus 60 ~~~~~ll~~A~~~~i~~L~~~c~~~l~~~l~~~n~~~~~~~~~~~~~~~a~~~~~~~L~~~~~~~i~~~~~~~~~~~~f~ 139 (148)
+...+-|.+|-.|.|.++.+.........+++.- +..+..+...+ ...+...+..|...-=..-++.+++.
T Consensus 11 ~~~~~~LKaal~~~V~rI~~~~g~~~~~~vs~~~--------i~aL~E~~~~~-~~~ia~Da~~fA~HAgRkTI~~eDV~ 81 (107)
T 3b0b_B 11 ELLIQRLRAAVHYTTGCLCQDVAEDKGVLFSKQT--------VAAISEITFRQ-CENFARDLEMFARHAKRSTITSEDVK 81 (107)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTCEECHHH--------HHHHHHHHHHH-HHHHHHHHHHHHHHTTCSEECHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcCCccCHHH--------HHHHHHHHHHH-HHHHHHHHHHHHHhcCcCcCCHHHHH
Confidence 3445566777777777666554443333444444 55555666555 34555555555554333333445554
Q ss_pred HHHhhCC
Q 044123 140 ESASEFP 146 (148)
Q Consensus 140 ~l~~~~p 146 (148)
-+.+.+|
T Consensus 82 La~Rrn~ 88 (107)
T 3b0b_B 82 LLARRSN 88 (107)
T ss_dssp HHTTTCH
T ss_pred HHHHhCH
Confidence 4444444
No 61
>2r9r_B Paddle chimera voltage gated potassium channel KV; voltage sensor, voltage dependent, ION CH shaker, membrane protein, eukaryotic; HET: NAP PGW; 2.40A {Rattus norvegicus} PDB: 3lnm_B* 3lut_B* 2a79_B*
Probab=34.87 E-value=24 Score=27.86 Aligned_cols=48 Identities=13% Similarity=0.028 Sum_probs=35.8
Q ss_pred CCeeecccCCcHHHHHHHHHHHhC-CCCCchhhHHHHHHHHHhccccchHHHH
Q 044123 27 GGMTTMEVAEEGEVLKALVDFLYT-GSLPREKLQKHVVGLFAAGDNYEIEYLR 78 (148)
Q Consensus 27 ~~i~l~~~~~~~~~~~~~l~yiYt-g~~~~~~~~~~~~~ll~~A~~~~i~~L~ 78 (148)
++.-+ |=+ +..|+.+|+|..| |++..+.+ -....+.+-|++|+++.+.
T Consensus 93 ~~~f~-DR~--~~~F~~IL~~~r~~g~l~~p~~-~~~~~~~~E~~f~~i~~~~ 141 (514)
T 2r9r_B 93 NEYFF-DRN--RPSFDAILYYYQSGGRLRRPVN-VPLDIFSEEIRFYELGEEA 141 (514)
T ss_dssp TEEEE-CSC--HHHHHHHHHHHHHTSCCCCCTT-SCHHHHHHHHHHTTCCHHH
T ss_pred CCEEE-cCC--hHHHHHHHHHHhcCCccccCCc-ccHHHHHHHHHhcCCCHHH
Confidence 33444 567 9999999999999 98865322 2345678889999998754
No 62
>2rh3_A Protein VIRC2; ribbon-helix-helix, crown GALL tumor, DNA binding P; 1.70A {Agrobacterium tumefaciens} SCOP: a.43.1.10
Probab=30.83 E-value=35 Score=21.03 Aligned_cols=40 Identities=10% Similarity=0.258 Sum_probs=31.0
Q ss_pred HHhhcCChHHHHHHHHHHHHHchHHhhcchhHHHHHhhCC
Q 044123 107 RIGYNYQLDELRDAALNFIVKKVEELVFSDKYEESASEFP 146 (148)
Q Consensus 107 ~~a~~~~~~~L~~~~~~~i~~~~~~~~~~~~f~~l~~~~p 146 (148)
.+..+|+..+-....++-....|+.+.....|...+++||
T Consensus 20 ~Li~qys~sksLqmILrrAL~dfE~mL~dGsF~~~pksYP 59 (121)
T 2rh3_A 20 NLILQYSPSKSLQMILRRALGDFENMLADGSFRAAPKSYP 59 (121)
T ss_dssp HHTTTSCHHHHHHHHHHHHHHHHHHHHHTSGGGGSCCCCC
T ss_pred HHHHHhChHHHHHHHHHHHHHHHHHHHcCCCcccccccCC
Confidence 3455666666556666666778999999999999999997
No 63
>4b8b_A General negative regulator of transcription subun; 2.80A {Saccharomyces cerevisiae S288C}
Probab=27.89 E-value=89 Score=25.33 Aligned_cols=47 Identities=15% Similarity=0.031 Sum_probs=31.2
Q ss_pred HHHHHHHh-hcCChHHHHHHHHHHHHHchHHhhcchhHH-HHHhhCCCC
Q 044123 102 AIDFLRIG-YNYQLDELRDAALNFIVKKVEELVFSDKYE-ESASEFPHL 148 (148)
Q Consensus 102 ~~~~~~~a-~~~~~~~L~~~~~~~i~~~~~~~~~~~~f~-~l~~~~p~l 148 (148)
++.++.-| ..-....+..+...-+-+=...+.+.|.|. .+....|+|
T Consensus 533 ALr~ILeAlrkp~~skmf~FGi~ALeqF~~RL~ewPqyc~~lL~~ip~l 581 (603)
T 4b8b_A 533 AFRIIMRFAKEPPESKMFKFAVQAIYAFRIRLAEYPQYCKDLLRDVPAL 581 (603)
T ss_dssp HHHHHHHHHTSCTTSHHHHHHHHHHHHTGGGGGGCHHHHHHHHHHCGGG
T ss_pred HHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcCc
Confidence 34444333 333345677777777777777888888888 677777764
No 64
>4h63_H Mediator of RNA polymerase II transcription subun; mediator complex, nucleus; 3.40A {Schizosaccharomyces pombe}
Probab=20.49 E-value=59 Score=22.34 Aligned_cols=13 Identities=23% Similarity=0.677 Sum_probs=11.0
Q ss_pred HHHHHHHHHhCCC
Q 044123 40 VLKALVDFLYTGS 52 (148)
Q Consensus 40 ~~~~~l~yiYtg~ 52 (148)
....+++|+|+|+
T Consensus 187 ~~~~vl~f~~~G~ 199 (200)
T 4h63_H 187 MLTDILSFMKSGK 199 (200)
T ss_dssp HHHHHHHHHHTCC
T ss_pred CHHHHHHHHhcCC
Confidence 3678999999995
Done!