Query 044126
Match_columns 333
No_of_seqs 243 out of 2456
Neff 6.7
Searched_HMMs 29240
Date Mon Mar 25 20:25:23 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/044126.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/044126hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3i6s_A Subtilisin-like proteas 100.0 6.7E-70 2.3E-74 565.1 32.0 305 12-323 323-645 (649)
2 3vta_A Cucumisin; subtilisin-l 100.0 9.5E-67 3.3E-71 539.8 30.8 305 11-323 316-620 (621)
3 1xf1_A C5A peptidase, SCP; hyd 100.0 5.8E-43 2E-47 376.0 19.6 256 13-332 325-615 (926)
4 3lxu_X Tripeptidyl-peptidase 2 99.9 1.1E-24 3.8E-29 237.1 12.8 221 57-323 417-653 (1354)
5 1y9z_A Alkaline serine proteas 99.9 7.4E-23 2.5E-27 203.4 9.9 78 106-197 360-437 (441)
6 3afg_A Subtilisin-like serine 99.9 1.2E-22 4E-27 207.0 10.3 120 50-177 300-419 (539)
7 4h6x_A Thiazoline oxidase/subt 99.8 1.6E-21 5.5E-26 188.9 8.4 136 13-175 197-337 (357)
8 1gci_A Subtilisin; hydrolase, 99.8 2.3E-21 7.8E-26 181.0 8.3 99 50-175 171-269 (269)
9 1r0r_E Subtilisin carlsberg; h 99.8 4.3E-21 1.5E-25 179.4 7.9 99 50-175 176-274 (274)
10 1to2_E Subtilisin BPN'; serine 99.8 6.8E-21 2.3E-25 178.8 9.0 101 50-177 177-277 (281)
11 1wmd_A Protease; alpha-beta hy 99.8 3.4E-21 1.2E-25 190.9 6.9 116 56-177 199-319 (434)
12 2iy9_A SUBA; toxin, shiga, pla 99.8 4.4E-21 1.5E-25 184.6 6.1 101 53-177 221-330 (347)
13 1dbi_A AK.1 serine protease; h 99.8 1.6E-20 5.6E-25 176.0 8.9 127 13-175 153-279 (280)
14 2x8j_A Intracellular subtilisi 99.8 1.2E-20 4.2E-25 180.7 7.5 134 13-176 172-311 (327)
15 4h6w_A N-terminal cyanobactin 99.8 8.4E-21 2.9E-25 179.2 5.2 106 51-175 178-287 (306)
16 1r6v_A Subtilisin-like serine 99.8 2.5E-20 8.4E-25 193.7 7.5 119 58-187 327-450 (671)
17 3lpc_A APRB2; protease, subtil 99.8 3.7E-20 1.2E-24 177.5 7.8 110 50-177 225-338 (340)
18 2ixt_A 36KDA protease; serine 99.8 8.3E-20 2.9E-24 173.0 9.9 103 55-170 197-309 (310)
19 3zxy_A Subtilisin-like protein 99.8 2E-20 7E-25 175.0 4.4 107 50-175 164-274 (282)
20 2z2z_A TK-subtilisin precursor 99.8 1.9E-20 6.3E-25 183.6 3.8 101 50-176 279-392 (395)
21 1thm_A Thermitase; hydrolase(s 99.8 9E-20 3.1E-24 170.8 8.0 98 50-175 181-278 (279)
22 3t41_A Epidermin leader peptid 99.8 1.1E-19 3.7E-24 181.6 8.1 105 50-178 340-467 (471)
23 2z30_A TK-subtilisin; thermoco 99.8 4.8E-20 1.6E-24 175.8 5.1 101 50-176 204-317 (320)
24 2oxa_A Extracellular serine pr 99.8 3.3E-19 1.1E-23 183.5 11.7 124 50-181 258-430 (600)
25 2id4_A Kexin; KEX2, kexin, fur 99.7 3.8E-18 1.3E-22 172.3 8.6 109 50-178 223-344 (503)
26 1p8j_A Furin precursor; prohor 99.7 2.8E-18 9.5E-23 171.8 6.8 115 50-178 210-332 (471)
27 1sh7_A Extracellular subtilisi 99.7 2.2E-17 7.6E-22 155.1 9.2 83 50-153 176-258 (284)
28 3hjr_A Extracellular serine pr 99.7 4.1E-17 1.4E-21 167.4 10.9 119 52-178 260-427 (600)
29 2pwa_A Proteinase K; structure 99.7 2.4E-17 8.3E-22 154.5 7.6 93 50-171 180-272 (279)
30 4dzt_A Aqualysin-1, aqualysin- 99.7 5.3E-17 1.8E-21 151.4 9.4 85 50-153 176-260 (276)
31 2b6n_A Proteinase K; S binding 99.7 6E-17 2.1E-21 151.5 9.5 84 50-152 178-261 (278)
32 3f7m_A Alkaline serine proteas 99.6 2.1E-16 7.3E-21 147.6 6.0 80 50-151 181-260 (279)
33 2qtw_B Proprotein convertase s 99.6 1E-15 3.5E-20 155.2 9.5 80 52-150 186-269 (546)
34 2p4e_P Proprotein convertase s 99.6 9.3E-17 3.2E-21 166.7 0.0 79 53-150 339-421 (692)
35 1ga6_A Serine-carboxyl protein 98.8 2.4E-09 8.2E-14 104.2 3.1 101 61-175 236-363 (372)
36 1t1e_A Kumamolisin; proenzyme, 98.6 1.2E-08 4E-13 104.1 4.2 88 72-175 434-541 (552)
37 2ys4_A Hydrocephalus-inducing 97.1 0.0018 6E-08 52.5 8.0 77 238-322 41-118 (122)
38 3edy_A Tripeptidyl-peptidase 1 96.1 0.0031 1.1E-07 64.0 3.8 47 72-131 426-472 (544)
39 2e6j_A Hydin protein; PAPD, st 92.1 0.61 2.1E-05 36.2 8.0 67 238-308 26-93 (112)
40 2r39_A FIXG-related protein; s 91.8 0.82 2.8E-05 36.4 8.6 55 238-294 31-85 (118)
41 2qsv_A Uncharacterized protein 91.8 1 3.4E-05 39.8 9.9 80 238-321 19-104 (220)
42 3qbt_B Inositol polyphosphate 91.1 1.7 5.9E-05 35.7 10.1 83 239-322 44-137 (140)
43 1w8o_A Bacterial sialidase; 3D 80.3 16 0.00053 36.4 12.3 78 225-309 364-442 (601)
44 3qis_A Inositol polyphosphate 80.2 10 0.00035 36.0 10.4 85 238-323 46-141 (366)
45 2qsv_A Uncharacterized protein 79.7 18 0.00063 31.4 11.2 88 226-319 124-217 (220)
46 3idu_A Uncharacterized protein 78.3 9.7 0.00033 30.8 8.2 51 238-292 33-84 (127)
47 1wic_A Hypothetical protein ri 72.9 23 0.0008 29.2 9.4 52 239-293 36-87 (152)
48 3zyz_A Beta-D-glucoside glucoh 72.9 5 0.00017 41.8 6.3 55 238-294 613-675 (713)
49 1z9l_A Vesicle-associated memb 70.3 20 0.00069 28.5 8.2 53 238-293 27-79 (128)
50 2kq1_A BH0266 protein; solutio 69.0 1.3 4.6E-05 35.3 0.8 56 239-294 54-111 (119)
51 1row_A SSP-19, MSP-domain prot 66.6 25 0.00085 27.5 7.8 50 241-293 18-67 (109)
52 1msp_A MSP, major sperm protei 66.2 26 0.00088 27.9 8.0 51 239-292 26-76 (126)
53 2x41_A Beta-glucosidase; hydro 66.0 8.2 0.00028 40.2 6.2 71 222-294 597-678 (721)
54 1m1s_A WR4; structural genomic 65.9 23 0.00078 28.2 7.5 51 241-294 26-76 (116)
55 2cri_A Vesicle-associated memb 59.5 30 0.001 28.3 7.4 52 239-293 32-83 (147)
56 3sd2_A Putative member of DUF3 57.0 50 0.0017 25.6 7.7 66 227-307 35-100 (101)
57 3abz_A Beta-glucosidase I; gly 56.8 27 0.00092 37.0 8.2 71 221-293 716-798 (845)
58 3q48_A Chaperone CUPB2; IG fol 53.3 80 0.0027 28.3 9.8 86 239-326 43-150 (257)
59 4ay0_A Chaperone protein CAF1M 44.9 1.1E+02 0.0038 26.6 9.2 87 239-326 27-131 (218)
60 2l04_A Major tail protein V; b 43.2 25 0.00086 26.6 4.0 26 268-294 9-34 (91)
61 3isy_A Bsupi, intracellular pr 43.0 40 0.0014 26.9 5.3 54 238-292 18-88 (120)
62 2xg5_A PAPD, chaperone protein 39.3 1.9E+02 0.0065 25.0 10.4 86 239-326 15-121 (218)
63 3rfr_A PMOB; membrane, oxidore 38.6 1.6E+02 0.0054 28.4 9.5 48 238-292 298-368 (419)
64 1wgl_A TOLL-interacting protei 38.1 17 0.00057 25.4 2.1 29 120-148 8-36 (59)
65 4djm_A DRAB; chaperone, PILI; 35.2 1.9E+02 0.0063 25.6 9.1 59 239-298 37-98 (239)
66 4ep8_B Urease subunit beta; al 35.0 61 0.0021 25.1 5.0 50 238-289 18-82 (101)
67 1ni7_A ER75, hypothetical prot 34.8 30 0.001 28.9 3.5 29 113-142 81-109 (155)
68 2co7_B SAFB chaperone, putativ 34.2 1.8E+02 0.0062 25.2 8.8 59 239-298 27-88 (221)
69 2l0d_A Cell surface protein; s 33.4 1.7E+02 0.0059 22.8 8.0 25 238-262 19-44 (114)
70 1klf_A FIMC chaperone, chapero 33.0 2.3E+02 0.008 24.2 9.5 86 239-326 15-121 (205)
71 3g0m_A Cysteine desulfuration 29.7 29 0.00098 28.5 2.5 33 109-142 70-102 (141)
72 4ubp_B Protein (urease (chain 28.8 82 0.0028 25.4 4.9 49 238-289 24-88 (126)
73 4ac7_B Urease subunit beta; hy 28.8 82 0.0028 25.4 4.9 49 238-289 24-88 (126)
74 3lyw_A YBBR family protein; st 28.6 50 0.0017 25.0 3.5 38 240-277 43-81 (90)
75 2hr0_B Complement C3 alpha' ch 27.9 1.5E+02 0.0052 31.2 8.4 68 220-293 82-155 (915)
76 3hrz_B Cobra venom factor; ser 27.7 2.5E+02 0.0086 24.7 8.7 67 220-292 83-154 (252)
77 3e9t_A Na/Ca exchange protein; 27.7 51 0.0017 25.6 3.6 42 265-308 49-91 (114)
78 3ndz_E Endoglucanase D; cellot 26.6 2.2E+02 0.0075 21.9 9.3 30 240-269 17-47 (107)
79 4acq_A Alpha-2-macroglobulin; 26.0 2.5E+02 0.0087 31.4 10.1 67 221-293 771-840 (1451)
80 1l4i_A SFAE protein; periplasm 26.0 2.7E+02 0.0094 23.7 8.4 86 239-326 15-121 (206)
81 2aan_A Auracyanin A; cupredoxi 26.0 38 0.0013 26.9 2.6 36 250-289 13-50 (139)
82 3gfu_C Chaperone protein FAEE; 24.1 3.6E+02 0.012 23.5 9.0 86 239-326 15-117 (224)
83 3erx_A Pseudoazurin; copper pr 20.8 1.4E+02 0.0048 23.4 5.0 22 267-289 15-36 (123)
No 1
>3i6s_A Subtilisin-like protease; PA-domain, FN3-domain, hydrolase; HET: NAG FUC; 2.50A {Solanum lycopersicum} PDB: 3i74_A*
Probab=100.00 E-value=6.7e-70 Score=565.09 Aligned_cols=305 Identities=39% Similarity=0.643 Sum_probs=267.4
Q ss_pred ccccceeEeecHHHHHHHHHHHhccCCCCCceee-cceeeeecCCCCeeecccCCCCCCCCCCCcCCcEEeCCCceeecc
Q 044126 12 IKLDWCIKVWCEEEEARLADAIIGSDTKNPQAEI-LKTSVIKDSDAPIVASFSSRGPNKYVPDILKPDISAPGVNILAAY 90 (333)
Q Consensus 12 ~~~~~~~~~~~~~~g~~l~~y~~~~s~~~~~~~i-~~~~~~~~~~~~~va~fSs~Gp~~~~~~~lKPDI~APG~~I~sa~ 90 (333)
..+.+|.++++.++|+.|++|+ +++.+++++| +..++++..+++.+++||||||+...+++|||||+|||++|+++|
T Consensus 323 ~~~~~P~~~v~~~~g~~i~~yi--~s~~~~~a~i~~~~t~~~~~~~~~va~FSSrGP~~~~~~ilKPDI~APG~~Ilsa~ 400 (649)
T 3i6s_A 323 ATFPNPGVVVNKKEGKQVINYV--KNSVTPTATITFQETYLDTKPAPVVAASSARGPSRSYLGISKPDILAPGVLILAAY 400 (649)
T ss_dssp CCCCSCEEEECHHHHHHHHHHH--HTCSSCEEEEEEEEEECCCSSCCEECTTSCCSSCTTCTTSCSCCEEEECSSEEEEC
T ss_pred ccCcCCEEEEcHHHHHHHHHHH--hcCCCceEEEeecceeeccCCCCcccccCCCCCCCCCCCccCCeEEeCCCCeEeec
Confidence 4467899999999999999999 8999999999 788888888999999999999998778999999999999999999
Q ss_pred CCCCCCCcCcccc-cceeeEEeCCccchHHHHHHHHHHHHhhCCCCCHHHHHHHHHhcCCCCCCCC--------C-CCCc
Q 044126 91 SPLAPVSRDIEDE-RHVKYNIISGTSMACPHAAGVAAYVKSFHPDWSPSAIKSAIMTTAWPMNSSK--------N-TQAE 160 (333)
Q Consensus 91 ~~~~~~~~~~~~~-~~~~y~~~sGTSmAaP~VAG~aALl~~~~p~~sp~~ik~~L~~tA~~~~~~~--------~-~~~~ 160 (333)
+..........+. ....|..+||||||||||||++|||||+||+|+|++||++||+||.++.... . ++++
T Consensus 401 ~~~~~~~~~~~d~~~~~~y~~~SGTSMAaPhVAGvaALlks~~P~~Spa~IksaLmtTA~~~~~~g~~i~~~~~~~~a~~ 480 (649)
T 3i6s_A 401 PPNVFATSIGTNILLSTDYILESGTSMAAPHAAGIAAMLKAAHPEWSPSAIRSAMMTTADPLDNTRKPIKDSDNNKAATP 480 (649)
T ss_dssp CTTSCCEEETTTEEECCSEEEECSHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHTCBCBCTTSSBCEETTTSSBCCH
T ss_pred CCCCCccccccccccccceecccccccccHHHHHHHHHHHHhCCCCCHHHHHHHHhcccccccCCCCcccccccCCcCCc
Confidence 9865443333232 3468999999999999999999999999999999999999999998765421 1 5678
Q ss_pred cccCCCCcCccccCCCCccccCchhhHHHHHhcCCCCcccceeccCCCCc--cCCCCCCCCCCCCCCCceeeec-cCCCc
Q 044126 161 FAYGSGHINPVKAINPGLVYGAFKQDYINMLCSMGYDVDKLRTISGDNST--CSKGSEKTSPKDLNYPSMAAQV-SSGES 237 (333)
Q Consensus 161 ~~~G~G~id~~~A~~~~lv~d~~~~dy~~~lc~~~~~~~~i~~~~g~~~~--c~~~~~~~~~~~lN~pSi~~~~-~~~~~ 237 (333)
++||+|+||+.+|++||||||+..+||+.|||++||+..+|+.|+++++. |++ ...+||||||++.+ +.+..
T Consensus 481 ~~~GaG~vn~~~A~~pGLvyd~~~~dy~~flc~~~y~~~~i~~~~~~~~~~~C~~-----~~~~lNyPs~~~~~~~~~~~ 555 (649)
T 3i6s_A 481 LDMGAGHVDPNRALDPGLVYDATPQDYVNLLCSLNFTEEQFKTIARSSASHNCSN-----PSADLNYPSFIALYSIEGNF 555 (649)
T ss_dssp HHHTTCBCCHHHHTCCSEECCCCHHHHHHHHHTTCCCHHHHHHHHTTTSCC-CCC-----CCCCCCCSSEEEEECCSSCC
T ss_pred CCCCeeeeCHHHhcCccccccCCchhHHHhhhcCCCCcccceeeecCCCcCCCCC-----chhhcCCCcEEeecccCCCC
Confidence 99999999999999999999999999999999999999999999998878 975 36799999999987 44211
Q ss_pred ee--EEEEEEEEeccCCCeeEEEEEecCCceEEEEEcCeEEEeeCCcEEEEEEEEEeecCCCCCeEEEEEEEEc--CCce
Q 044126 238 FT--IKFPRTVTNIGLPNSTYKAGILQNSKISVNVVPEVLSFRSLNEKKSFIVTVTGKGLASGSIVSAALVWFD--GSRI 313 (333)
Q Consensus 238 ~~--~t~~rtvtNvg~~~~tY~~~v~~~~g~~v~v~P~~l~~~~~g~~~~~~Vt~~~~~~~~~~~~~G~i~~~~--~~~~ 313 (333)
.. ++|+|||||||+...+|++++++|.|++|+|+|++|+|++.+|+++|+|+|+......+.|.||+|+|+| ++|.
T Consensus 556 ~~~~~~~~Rtvtnvg~~~~~y~~~v~~p~g~~v~v~P~~l~f~~~~~~~~f~v~~~~~~~~~~~~~fg~l~w~~~~~~h~ 635 (649)
T 3i6s_A 556 TLLEQKFKRTVTNVGKGAATYKAKLKAPKNSTISVSPQILVFKNKNEKQSYTLTIRYIGDEGQSRNVGSITWVEQNGNHS 635 (649)
T ss_dssp CCEEEEEEEEEEECC--CEEEEEEEECCTTEEEEEESSEEEECC-CCEEEEEEEEEECCC---CCCEEEEEEEETTSCCE
T ss_pred ccceEEEEEEEEEeCCCCcEEEEEEecCCCCEEEEECCEEEEecCCCEEEEEEEEEecccCCCceEEEEEEEEcCCCCeE
Confidence 12 8999999999998999999999999999999999999988999999999999876555678999999998 9999
Q ss_pred EEeeEEEEee
Q 044126 314 VRSPIVVHSQ 323 (333)
Q Consensus 314 vr~P~~v~~~ 323 (333)
||+||+|+..
T Consensus 636 vrsPi~v~~~ 645 (649)
T 3i6s_A 636 VRSPIVTSPI 645 (649)
T ss_dssp EEEEEEEEEC
T ss_pred EEEeEEEEEc
Confidence 9999999876
No 2
>3vta_A Cucumisin; subtilisin-like fold, serine protease, hydrolase; HET: DFP NAG FUC BMA MAN; 2.75A {Cucumis melo}
Probab=100.00 E-value=9.5e-67 Score=539.82 Aligned_cols=305 Identities=48% Similarity=0.799 Sum_probs=247.6
Q ss_pred cccccceeEeecHHHHHHHHHHHhccCCCCCceeecceeeeecCCCCeeecccCCCCCCCCCCCcCCcEEeCCCceeecc
Q 044126 11 LIKLDWCIKVWCEEEEARLADAIIGSDTKNPQAEILKTSVIKDSDAPIVASFSSRGPNKYVPDILKPDISAPGVNILAAY 90 (333)
Q Consensus 11 l~~~~~~~~~~~~~~g~~l~~y~~~~s~~~~~~~i~~~~~~~~~~~~~va~fSs~Gp~~~~~~~lKPDI~APG~~I~sa~ 90 (333)
.....+|.+.++.++|..++.|+ .++..+.+.++.........++.++.||||||+...+++|||||+|||++|+++|
T Consensus 316 ~~~~~lP~~~v~~~~g~~i~~~~--~~~~~~~a~~~~~~~~~~~~~~~va~FSSrGP~~~~~~ilKPDI~APG~~Ilsa~ 393 (621)
T 3vta_A 316 ADSYPLPSSVLDPNDLLATLRYI--YSIRSPGATIFKSTTILNASAPVVVSFSSRGPNRATKDVIKPDISGPGVEILAAW 393 (621)
T ss_dssp CCCCSSSEEEECHHHHHHHHHHH--HHHSSCCEEECCCEEEECTTCCCBCTTSCCCSCTTCTTSCSCCEEEECSSEEEEC
T ss_pred ccccccceEEECHHHHHHHHHHH--hccCCcceEEecceEeccCCCCceeeecCCCCCCCCCCeeccccccCCcceEeec
Confidence 34566799999999999999999 8888888888666666667899999999999998778999999999999999999
Q ss_pred CCCCCCCcCcccccceeeEEeCCccchHHHHHHHHHHHHhhCCCCCHHHHHHHHHhcCCCCCCCCCCCCccccCCCCcCc
Q 044126 91 SPLAPVSRDIEDERHVKYNIISGTSMACPHAAGVAAYVKSFHPDWSPSAIKSAIMTTAWPMNSSKNTQAEFAYGSGHINP 170 (333)
Q Consensus 91 ~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~p~~sp~~ik~~L~~tA~~~~~~~~~~~~~~~G~G~id~ 170 (333)
+....... ......|..+||||||||||||++|||||+||+|+|++||++||+||+++.....+..+++||+|+|||
T Consensus 394 ~~~~~~~~---~~~~~~y~~~SGTSMAaPhVAGvaALl~q~~P~~spa~IksaLmtTA~~~~~~~~~~~~~~~GaG~v~~ 470 (621)
T 3vta_A 394 PSVAPVGG---IRRNTLFNIISGTSMSCPHITGIATYVKTYNPTWSPAAIKSALMTTASPMNARFNPQAEFAYGSGHVNP 470 (621)
T ss_dssp CSSSCBTT---BCCCCSEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHTCBCCCTTTCTTTHHHHTTCBCCH
T ss_pred CccccccC---cCCCCcceEecCccccchhhhhHHHHHHHHCCCCCHHHHHHHHHhcCCcccccCCCCCchhcCCCccCH
Confidence 87543322 233467999999999999999999999999999999999999999999987655577899999999999
Q ss_pred cccCCCCccccCchhhHHHHHhcCCCCcccceeccCCCCccCCCCCCCCCCCCCCCceeeeccCCCceeEEEEEEEEecc
Q 044126 171 VKAINPGLVYGAFKQDYINMLCSMGYDVDKLRTISGDNSTCSKGSEKTSPKDLNYPSMAAQVSSGESFTIKFPRTVTNIG 250 (333)
Q Consensus 171 ~~A~~~~lv~d~~~~dy~~~lc~~~~~~~~i~~~~g~~~~c~~~~~~~~~~~lN~pSi~~~~~~~~~~~~t~~rtvtNvg 250 (333)
.+|++||||||+..+||+.|||+++|+..+++.++++...|+.. ......+||||||++....+...+++++|||||||
T Consensus 471 ~~A~~pGLvyd~~~~dy~~~lc~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~lN~pS~~v~~~~~~~~~~t~~rtvtnvg 549 (621)
T 3vta_A 471 LKAVRPGLVYDANESDYVKFLCGQGYNTQAVRRITGDYSACTSG-NTGRVWDLNYPSFGLSVSPSQTFNQYFNRTLTSVA 549 (621)
T ss_dssp HHHSCCSEECCCCGGGCC------------------------------CGGGSCCSSEEEECCSSCCEEEEEEEEEEECS
T ss_pred HHhcCCCeEeecccchhhhhhcccCCCchhheeeeccccccCCC-CcCcccccccccEEEEccCCCceEEEEEEEEEccC
Confidence 99999999999999999999999999999999999988888764 44557899999999976655458899999999999
Q ss_pred CCCeeEEEEEecCCceEEEEEcCeEEEeeCCcEEEEEEEEEeecCCCCCeEEEEEEEEcCCceEEeeEEEEee
Q 044126 251 LPNSTYKAGILQNSKISVNVVPEVLSFRSLNEKKSFIVTVTGKGLASGSIVSAALVWFDGSRIVRSPIVVHSQ 323 (333)
Q Consensus 251 ~~~~tY~~~v~~~~g~~v~v~P~~l~~~~~g~~~~~~Vt~~~~~~~~~~~~~G~i~~~~~~~~vr~P~~v~~~ 323 (333)
+...||++++++|.|++|+|+|++|+|++.+|+++|+|+|+.. ..+.|+||+|+|.|++|.||+||+|+..
T Consensus 550 ~~~~ty~~~v~~p~gv~v~V~P~~l~f~~~~~~~~~~vt~~~~--~~~~~~~g~l~w~d~~h~Vr~Pi~v~~~ 620 (621)
T 3vta_A 550 PQASTYRAMISAPQGLTISVNPNVLSFNGLGDRKSFTLTVRGS--IKGFVVSASLVWSDGVHYVRSPITITSL 620 (621)
T ss_dssp SSCEEEEEEEECCSSEEEEEESSEEEECSTTCEEEEEEEEEEC--CCSSEEEEEEEEECSSCCCEEEEEEECC
T ss_pred CCCeEEEEEEECCCCcEEEEecCEEEEcCCCcEEEEEEEEEec--CCCceEEEEEEEEcCCEEEEeCEEEEEe
Confidence 9999999999999999999999999998889999999999864 5578999999999999999999999864
No 3
>1xf1_A C5A peptidase, SCP; hydrolase; HET: CIT; 1.90A {Streptococcus pyogenes} PDB: 3eif_A*
Probab=100.00 E-value=5.8e-43 Score=376.03 Aligned_cols=256 Identities=21% Similarity=0.295 Sum_probs=203.3
Q ss_pred cccceeEeecHHHHHHHHHHHhccCCCCCceee-cce--eeeecCCCCeeecccCCCCCCCCCCCcCCcEEeCCCceeec
Q 044126 13 KLDWCIKVWCEEEEARLADAIIGSDTKNPQAEI-LKT--SVIKDSDAPIVASFSSRGPNKYVPDILKPDISAPGVNILAA 89 (333)
Q Consensus 13 ~~~~~~~~~~~~~g~~l~~y~~~~s~~~~~~~i-~~~--~~~~~~~~~~va~fSs~Gp~~~~~~~lKPDI~APG~~I~sa 89 (333)
...+|+++++.++|.+|+.. +.++| +.. ..+....++.++.||||||+. +++|||||+|||++|+++
T Consensus 325 ~~~iP~~~i~~~~g~~l~~~--------~~~ti~~~~~~~~~~~~~~~~~a~FSSrGp~~--~~~lKPDI~APG~~I~sa 394 (926)
T 1xf1_A 325 VDQMPAAFISRKDGLLLKDN--------PQKTITFNATPKVLPTASGTKLSRFSSWGLTA--DGNIKPDIAAPGQDILSS 394 (926)
T ss_dssp STTCCEEEECHHHHHHHHHC--------SSCEEEECSSCEEEECSSCSBCCTTSCCCBCT--TSCBSCCEEEECCCEEES
T ss_pred cccccEEEEeHHHHHHHHhC--------CceEEEecccceecccCCcceeccccCCCCCC--CCccCceEECCCCCEEee
Confidence 34579999999999988641 33455 332 235566789999999999995 899999999999999999
Q ss_pred cCCCCCCCcCcccccceeeEEeCCccchHHHHHHHHHHHH----hhCCCCCHHH----HHHHHHhcCCCCCCCCC--CCC
Q 044126 90 YSPLAPVSRDIEDERHVKYNIISGTSMACPHAAGVAAYVK----SFHPDWSPSA----IKSAIMTTAWPMNSSKN--TQA 159 (333)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~----~~~p~~sp~~----ik~~L~~tA~~~~~~~~--~~~ 159 (333)
+++ +.|..+||||||||||||++|||+ +.||+|+|+| ||++||+||+++..... .++
T Consensus 395 ~~~-------------~~y~~~SGTSMAaPhVAG~aALl~q~~k~~~P~~sp~~~~~~Iks~L~~TA~~~~~~~~~~~~~ 461 (926)
T 1xf1_A 395 VAN-------------NKYAKLSGTSMSAPLVAGIMGLLQKQYETQYPDMTPSERLDLAKKVLMSSATALYDEDEKAYFS 461 (926)
T ss_dssp SSC-------------SSSCEEESCTTHHHHHHHHHHHHHHHHHHSSSSSHHHHHHHHHHHHHHHHSBCCEEGGGTEECC
T ss_pred ccC-------------CcceecCccchhHHHHHHHHHHHHHHHhccCCCCCHHHHHHHHHHHHHhcCCCcccCCCCccCC
Confidence 975 369999999999999999999995 5699999997 99999999998754321 456
Q ss_pred ccccCCCCcCccccCCCCccccCchhhHHHHHhcCCCCcccceeccCCCCccCCCCCCCCCCCCCCCceeeeccCCCcee
Q 044126 160 EFAYGSGHINPVKAINPGLVYGAFKQDYINMLCSMGYDVDKLRTISGDNSTCSKGSEKTSPKDLNYPSMAAQVSSGESFT 239 (333)
Q Consensus 160 ~~~~G~G~id~~~A~~~~lv~d~~~~dy~~~lc~~~~~~~~i~~~~g~~~~c~~~~~~~~~~~lN~pSi~~~~~~~~~~~ 239 (333)
+++||+|+||+.+|+++.+ |||..++... +|.+..+. ..
T Consensus 462 ~~~~G~G~vn~~~A~~~~~-----------~l~~~~~~~~---------------------------~i~l~~~~---~~ 500 (926)
T 1xf1_A 462 PRQQGAGAVDAKKASAATM-----------YVTDKDNTSS---------------------------KVHLNNVS---DK 500 (926)
T ss_dssp HHHHTTCBCCHHHHHHCSE-----------EEEESSSSCS---------------------------CEEEEEEC---SE
T ss_pred hhccCCCccCHHHhcCCCe-----------EEEcCCCCcc---------------------------eeeccccC---cc
Confidence 8899999999999999865 6776654321 33444332 46
Q ss_pred EEEEEEEEeccCC--CeeEEEEEec--CCceEEEEEcCeEEEe-------eCCcEEEEEEEEEeec--------CCCCCe
Q 044126 240 IKFPRTVTNIGLP--NSTYKAGILQ--NSKISVNVVPEVLSFR-------SLNEKKSFIVTVTGKG--------LASGSI 300 (333)
Q Consensus 240 ~t~~rtvtNvg~~--~~tY~~~v~~--~~g~~v~v~P~~l~~~-------~~g~~~~~~Vt~~~~~--------~~~~~~ 300 (333)
.+++|||||+|+. ..+|++++.. |.+..++|.|..|.+. ++||+++|+|+|+++. .+.+.+
T Consensus 501 ~~~~~tv~N~g~~~~~~~y~~~v~~~~~~~~~~~v~p~~l~~~~~~~vtv~ag~~~~~~vt~~~~~~~~~~~~~~~~~~~ 580 (926)
T 1xf1_A 501 FEVTVNVHNKSDKPQELYYQATVQTDKVDGKHFALAPKVLYETSWQKITIPANSSKQVTVPIDASRFSKDLLAQMKNGYF 580 (926)
T ss_dssp EEEEEEEEECSSSCEEEEEEEEEEEEEEETTEEEEEEEEEEECCCEEEEECTTEEEEEEEEEECHHHHHHHHHHSTTCEE
T ss_pred EEEEEEEEEeCCCceeEEEEEEEEeccCCCceEEeccceeEeccCCeEEECCCCEEEEEEEEEcCccchhhcccccCCcE
Confidence 8899999999984 4678888775 6688888888766544 5699999999999862 245578
Q ss_pred EEEEEEEE--cCCce-EEeeEEEEeecccccCCCC
Q 044126 301 VSAALVWF--DGSRI-VRSPIVVHSQGLQNLNKFP 332 (333)
Q Consensus 301 ~~G~i~~~--~~~~~-vr~P~~v~~~~~~~~~~~~ 332 (333)
+||+|+|+ ++.|. ||+||+++.++++++..++
T Consensus 581 ~~G~i~~~~~~~~~~~v~~P~~~~~g~~~~~~v~~ 615 (926)
T 1xf1_A 581 LEGFVRFKQDPTKEELMSIPYIGFRGDFGNLSALE 615 (926)
T ss_dssp EEEEEEEESSTTSCCCEEEEEEEEESCGGGSCCBC
T ss_pred EEEEEEEEeCCCCCCEEEeeeEEEecCcccCcccc
Confidence 99999998 56565 9999999999998876553
No 4
>3lxu_X Tripeptidyl-peptidase 2; spindle complex, aminopeptidase, hydrolase, phosphoprotein, protease; 3.14A {Drosophila melanogaster}
Probab=99.91 E-value=1.1e-24 Score=237.14 Aligned_cols=221 Identities=23% Similarity=0.251 Sum_probs=150.9
Q ss_pred CeeecccCCCCCCCCCCCcCCcEEeCCCceeeccCCCCCCCcCcccccceeeEEeCCccchHHHHHHHHHHHHh----hC
Q 044126 57 PIVASFSSRGPNKYVPDILKPDISAPGVNILAAYSPLAPVSRDIEDERHVKYNIISGTSMACPHAAGVAAYVKS----FH 132 (333)
Q Consensus 57 ~~va~fSs~Gp~~~~~~~lKPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~----~~ 132 (333)
+.++.|||+||+. ++.+||||+|||++|.++.... .+.|..++|||||||||||++|||++ .+
T Consensus 417 g~~asFSS~GPt~--dg~~KpDIaAPG~~I~St~~~~-----------~~~y~~~SGTSmAAP~VAGvAALLLSalkq~~ 483 (1354)
T 3lxu_X 417 GNVYTWTSRDPCI--DGGQGVTVCAPGGAIASVPQFT-----------MSKSQLMNGTSMAAPHVAGAVALLISGLKQQN 483 (1354)
T ss_dssp -CCCCCCCCSCCS--SSSCCEEEEEEC--------------------------CCCCGGGCHHHHHHHHHHHHHHHHHTT
T ss_pred CccccccCCCCCc--cCCCcceEEecCceEEEeecCC-----------CCceecCCCCCHHHHHHHHHHHHHHHhhHhhC
Confidence 6889999999986 7899999999999999875432 14789999999999999999999986 79
Q ss_pred CCCCHHHHHHHHHhcCCCCCCCCCCCCccccCCCCcCccccCCCCccccCchhhHHHHHhcCCCCc-ccceeccCCCCcc
Q 044126 133 PDWSPSAIKSAIMTTAWPMNSSKNTQAEFAYGSGHINPVKAINPGLVYGAFKQDYINMLCSMGYDV-DKLRTISGDNSTC 211 (333)
Q Consensus 133 p~~sp~~ik~~L~~tA~~~~~~~~~~~~~~~G~G~id~~~A~~~~lv~d~~~~dy~~~lc~~~~~~-~~i~~~~g~~~~c 211 (333)
|.+++.+||++|++||.++... .++.+|+|+||+.+|++..+.++..+++|+.|+|..++.. ..| ..++.. |
T Consensus 484 P~LTp~qVk~lL~~TA~~~~~~----~~~~~G~GlLDa~~AV~~a~~~~~~p~~~v~f~~~v~~~~~rgI--ylR~~~-~ 556 (1354)
T 3lxu_X 484 IEYSPYSIKRAISVTATKLGYV----DPFAQGHGLLNVEKAFEHLTEHRQSKDNMLRFSVRVGNNADKGI--HLRQGV-Q 556 (1354)
T ss_dssp CCCCHHHHHHHHHTTSBCCTTS----CTTTSSSSBCCHHHHHHHHHTTTTCGGGGEEEEEEETTTTBSSE--EECSSC-C
T ss_pred CCCCHHHHHHHHHHhCccCCCC----CcccccCCEeCHHHHHHHHHhcCCCCccceEEEEEecCCCCCce--EEeccc-c
Confidence 9999999999999999988754 5678999999999999999999999999999999987532 222 111100 0
Q ss_pred CCCCCCCCCCCCCCCceeeeccCCCceeEEEEEEEEecc---CC-Ce--eEEEEEecCCceEEEEEcCeEEEeeCCcEEE
Q 044126 212 SKGSEKTSPKDLNYPSMAAQVSSGESFTIKFPRTVTNIG---LP-NS--TYKAGILQNSKISVNVVPEVLSFRSLNEKKS 285 (333)
Q Consensus 212 ~~~~~~~~~~~lN~pSi~~~~~~~~~~~~t~~rtvtNvg---~~-~~--tY~~~v~~~~g~~v~v~P~~l~~~~~g~~~~ 285 (333)
... .....+++-+..|.. .. .. .-++.....+ --|. .|..|.+ .++.++
T Consensus 557 --------------~~~-------~~~tv~V~p~f~~~~~~~~~~~i~f~~~l~L~~t~-~wv~-~p~~l~l--~~~~r~ 611 (1354)
T 3lxu_X 557 --------------RNS-------IDYNVYIEPIFYNDKEADPKDKFNFNVRLNLIASQ-PWVQ-CGAFLDL--SYGTRS 611 (1354)
T ss_dssp --------------CSC-------EEEEEEEEEEESSCSCSSSTTCSCCCCEEEEEESS-TTEE-ECSCEEC--TTSCEE
T ss_pred --------------CCc-------eEEEEEEeeeecCcccCChhhccceEEEEEEecCC-Ccee-cccceee--cCCCce
Confidence 000 012223333342211 11 11 1222222221 1232 3887777 688999
Q ss_pred EEEEEEeecCCCCCeEEEEEEEEc-----CCceEEeeEEEEee
Q 044126 286 FIVTVTGKGLASGSIVSAALVWFD-----GSRIVRSPIVVHSQ 323 (333)
Q Consensus 286 ~~Vt~~~~~~~~~~~~~G~i~~~~-----~~~~vr~P~~v~~~ 323 (333)
|.|.+++... ..+.+++.|..-| .+...|+|+.|...
T Consensus 612 ~~v~vDp~~L-~~G~h~~~v~~~D~~~~~~gp~f~ipvTv~~P 653 (1354)
T 3lxu_X 612 IAVRVDPTGL-QPGVHSAVIRAYDTDCVQKGSLFEIPVTVVQP 653 (1354)
T ss_dssp EEEEECGGGC-CSEEEEEEEEEEESSCTTSCCSEEEEEEEEEC
T ss_pred EEEEECCCCC-CCcceeEEEEEEEcCCcccCceEEeeEEEEee
Confidence 9999999875 4578999997643 47899999999877
No 5
>1y9z_A Alkaline serine protease; subtilisin-like alpha/beta domain, insert beta barrel domain hydrolase; HET: PMS; 1.40A {Pseudoalteromonas SP} PDB: 1v6c_A* 1wvm_A*
Probab=99.88 E-value=7.4e-23 Score=203.38 Aligned_cols=78 Identities=37% Similarity=0.553 Sum_probs=69.4
Q ss_pred eeeEEeCCccchHHHHHHHHHHHHhhCCCCCHHHHHHHHHhcCCCCCCCCCCCCccccCCCCcCccccCCCCccccCchh
Q 044126 106 VKYNIISGTSMACPHAAGVAAYVKSFHPDWSPSAIKSAIMTTAWPMNSSKNTQAEFAYGSGHINPVKAINPGLVYGAFKQ 185 (333)
Q Consensus 106 ~~y~~~sGTSmAaP~VAG~aALl~~~~p~~sp~~ik~~L~~tA~~~~~~~~~~~~~~~G~G~id~~~A~~~~lv~d~~~~ 185 (333)
..|..+||||||||||||++|||+|+||+|+|++||++||+||+++... ..+.+||+|+||+.+|+
T Consensus 360 ~~y~~~sGTSmAaP~VAG~aALl~~~~p~~sp~~ik~~L~~TA~~~~~~---g~~~~~G~G~vn~~~A~----------- 425 (441)
T 1y9z_A 360 QDYEYYNGTSMATPHVSGVATLVWSYHPECSASQVRAALNATADDLSVA---GRDNQTGYGMINAVAAK----------- 425 (441)
T ss_dssp ESEEEECSHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHSBCCSSS---SCBTTTBTCBCCHHHHH-----------
T ss_pred CCceeecccccCCcccchHHHHHHHHCCCCCHHHHHHHHHhhchhhccC---CCcccccccccCHHHHH-----------
Confidence 4688999999999999999999999999999999999999999988653 35678999999999994
Q ss_pred hHHHHHhcCCCC
Q 044126 186 DYINMLCSMGYD 197 (333)
Q Consensus 186 dy~~~lc~~~~~ 197 (333)
||+.|||+.++.
T Consensus 426 ~~~~~lc~~~~~ 437 (441)
T 1y9z_A 426 AYLDESCTGPTD 437 (441)
T ss_dssp HHHHHCTTCC--
T ss_pred HHHHhhhcCCCC
Confidence 799999998753
No 6
>3afg_A Subtilisin-like serine protease; propeptide, thermococcus kodakaraensis, hydrolas protease; 2.00A {Thermococcus kodakarensis}
Probab=99.87 E-value=1.2e-22 Score=206.97 Aligned_cols=120 Identities=36% Similarity=0.572 Sum_probs=99.4
Q ss_pred eeecCCCCeeecccCCCCCCCCCCCcCCcEEeCCCceeeccCCCCCCCcCcccccceeeEEeCCccchHHHHHHHHHHHH
Q 044126 50 VIKDSDAPIVASFSSRGPNKYVPDILKPDISAPGVNILAAYSPLAPVSRDIEDERHVKYNIISGTSMACPHAAGVAAYVK 129 (333)
Q Consensus 50 ~~~~~~~~~va~fSs~Gp~~~~~~~lKPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~ 129 (333)
|...+..+.+++||||||.. ++++||||+|||++|++++....... +.....|..++|||||||||||++|||+
T Consensus 300 VgA~~~~~~~a~fSs~Gp~~--~~~~kpdi~APG~~I~s~~~~~~~~~----~~~~~~y~~~sGTSmAaP~VAG~aALl~ 373 (539)
T 3afg_A 300 VGAVDKYDVITDFSSRGPTA--DNRLKPEVVAPGNWIIAARASGTSMG----QPINDYYTAAPGTAMATPHVAGIAALLL 373 (539)
T ss_dssp EEEECTTSCBCSSSCCCCCT--TCBCCCSEEEECSSEEEECCTTCCCS----EECSSSEEEECSHHHHHHHHHHHHHHHH
T ss_pred EeeecCCcccccccCCCCCC--CCCCcccEecCcCCEEeeccCCCCCC----CCCcccccccCchHHHHHHHHHHHHHHH
Confidence 33456778999999999986 78999999999999999986532100 1111359999999999999999999999
Q ss_pred hhCCCCCHHHHHHHHHhcCCCCCCCCCCCCccccCCCCcCccccCCCC
Q 044126 130 SFHPDWSPSAIKSAIMTTAWPMNSSKNTQAEFAYGSGHINPVKAINPG 177 (333)
Q Consensus 130 ~~~p~~sp~~ik~~L~~tA~~~~~~~~~~~~~~~G~G~id~~~A~~~~ 177 (333)
++||+|++++||++|++||+++... ......+|+|+||+.+|++..
T Consensus 374 ~~~p~~s~~~vk~~L~~tA~~~~~~--~~~~~~~G~G~vn~~~Al~~~ 419 (539)
T 3afg_A 374 QAHPSWTPDKVKTALIETADIVKPD--EIADIAYGAGRVNAYKAAYYD 419 (539)
T ss_dssp HHCTTCCHHHHHHHHHHHSBCSSGG--GCSBTTTBTCBCCHHHHHTGG
T ss_pred HHCCCCCHHHHHHHHHhhCccCCCC--CCCccCccCCccCHHHHhhhc
Confidence 9999999999999999999987532 125778999999999999853
No 7
>4h6x_A Thiazoline oxidase/subtilisin-like protease; hydrolase; 2.00A {Prochloron didemni} PDB: 4aks_A 4akt_A
Probab=99.84 E-value=1.6e-21 Score=188.87 Aligned_cols=136 Identities=23% Similarity=0.196 Sum_probs=87.3
Q ss_pred cccceeEeecHHHHHHHHHHHhccCCCCCceeecc-eeeeecCCCCeeecccCCCCCCCCCCCcCCcEEeCCCceeeccC
Q 044126 13 KLDWCIKVWCEEEEARLADAIIGSDTKNPQAEILK-TSVIKDSDAPIVASFSSRGPNKYVPDILKPDISAPGVNILAAYS 91 (333)
Q Consensus 13 ~~~~~~~~~~~~~g~~l~~y~~~~s~~~~~~~i~~-~~~~~~~~~~~va~fSs~Gp~~~~~~~lKPDI~APG~~I~sa~~ 91 (333)
..++.+++.+.++|..-..|- . .... ..|...+..+.++.||+||+.. .||||+|||++|+++++
T Consensus 197 ~~gv~vV~AAGN~g~~~~~~P--a-------~~~~vi~Vga~~~~~~~~~fSn~G~~~-----~~~di~APG~~i~s~~~ 262 (357)
T 4h6x_A 197 DNNVLIVSPTGNNSNESWCLP--A-------VLPGTLAVGAAKVDGTPCHFSNWGGNN-----TKEGILAPGEEILGAQP 262 (357)
T ss_dssp HTTCEEEEECC------------------------CEEEEEECTTSSBCTTCC---CT-----TTTEEEEECSSEEECCT
T ss_pred hCCeEEEecccCCCCCcCcCc--c-------cCCCCceEEEeccCCcccccccCCCCC-----CccceeecCCCeEeccC
Confidence 445566666666665444443 1 1111 2333467789999999999753 48999999999999987
Q ss_pred CCCCCCcCcccccceeeEEeCCccchHHHHHHHHHHHHhh----CCCCCHHHHHHHHHhcCCCCCCCCCCCCccccCCCC
Q 044126 92 PLAPVSRDIEDERHVKYNIISGTSMACPHAAGVAAYVKSF----HPDWSPSAIKSAIMTTAWPMNSSKNTQAEFAYGSGH 167 (333)
Q Consensus 92 ~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~----~p~~sp~~ik~~L~~tA~~~~~~~~~~~~~~~G~G~ 167 (333)
.. +.|..++|||||||||||++|||+++ +|.|+++|||++|++||+++.... ...+..||+|+
T Consensus 263 ~~------------~~~~~~sGTS~AaP~vaG~~All~s~~~~~~~~lt~~~v~~~L~~tA~~~~~~~-~~~~~~~G~G~ 329 (357)
T 4h6x_A 263 CT------------EEPVRLTGTSMAAPVMTGISALLMSLQVQQGKPVDAEAVRTALLKTAIPCDPEV-VEEPERCLRGF 329 (357)
T ss_dssp TC------------SCCEEECSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHC---------------CTTCB
T ss_pred CC------------CcccccCcHHHHHHHHHHHHHHHHHhhHhhCCCCCHHHHHHHHHhhCccCCCCC-CCCcccceeEE
Confidence 64 45778999999999999999999964 567999999999999999875421 33567899999
Q ss_pred cCccccCC
Q 044126 168 INPVKAIN 175 (333)
Q Consensus 168 id~~~A~~ 175 (333)
||+.+|++
T Consensus 330 vn~~~A~~ 337 (357)
T 4h6x_A 330 VNIPGAMK 337 (357)
T ss_dssp CCHHHHHH
T ss_pred ecHHHHHH
Confidence 99999986
No 8
>1gci_A Subtilisin; hydrolase, serine protease; 0.78A {Bacillus lentus} SCOP: c.41.1.1 PDB: 1jea_A 1ndq_A 1svn_A 1tk2_A* 3bx1_A 1ah2_A 1iav_A* 1c9m_A* 1wsd_A 1mpt_A 1ndu_A 1c9j_A 1q5p_A* 1st3_A 1c9n_A*
Probab=99.84 E-value=2.3e-21 Score=180.96 Aligned_cols=99 Identities=40% Similarity=0.580 Sum_probs=89.2
Q ss_pred eeecCCCCeeecccCCCCCCCCCCCcCCcEEeCCCceeeccCCCCCCCcCcccccceeeEEeCCccchHHHHHHHHHHHH
Q 044126 50 VIKDSDAPIVASFSSRGPNKYVPDILKPDISAPGVNILAAYSPLAPVSRDIEDERHVKYNIISGTSMACPHAAGVAAYVK 129 (333)
Q Consensus 50 ~~~~~~~~~va~fSs~Gp~~~~~~~lKPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~ 129 (333)
|...+..+.++.||++||.+ ||+|||++|+++++. +.|..++|||||||||||++|||+
T Consensus 171 Vga~~~~~~~~~~S~~G~~~--------di~APG~~i~s~~~~-------------~~~~~~sGTS~AaP~vaG~aAll~ 229 (269)
T 1gci_A 171 VGATDQNNNRASFSQYGAGL--------DIVAPGVNVQSTYPG-------------STYASLNGTSMATPHVAGAAALVK 229 (269)
T ss_dssp EEEECTTSCBCTTCCCSTTE--------EEEEECSSEEEEETT-------------TEEEEECSHHHHHHHHHHHHHHHH
T ss_pred EEeecCCCCCCCCCCCCCCc--------ceEecCCCeEeecCC-------------CCEEEcCcHHHHHHHHHHHHHHHH
Confidence 33467778999999999975 999999999999875 478999999999999999999999
Q ss_pred hhCCCCCHHHHHHHHHhcCCCCCCCCCCCCccccCCCCcCccccCC
Q 044126 130 SFHPDWSPSAIKSAIMTTAWPMNSSKNTQAEFAYGSGHINPVKAIN 175 (333)
Q Consensus 130 ~~~p~~sp~~ik~~L~~tA~~~~~~~~~~~~~~~G~G~id~~~A~~ 175 (333)
|++|+|++.|||++|++||+++. .+..||+|+||+.+|++
T Consensus 230 ~~~p~~t~~~v~~~L~~tA~~~g------~~~~~G~G~vn~~~A~~ 269 (269)
T 1gci_A 230 QKNPSWSNVQIRNHLKNTATSLG------STNLYGSGLVNAEAATR 269 (269)
T ss_dssp HHCTTCCHHHHHHHHHHTSBCCS------CHHHHTTCBCCHHHHTC
T ss_pred HhCCCCCHHHHHHHHHHhCccCC------CCCCcccCccCHHHHcC
Confidence 99999999999999999999874 36789999999999975
No 9
>1r0r_E Subtilisin carlsberg; high resolution, serine protease, protein inhibitor, hydrolase; 1.10A {Bacillus licheniformis} SCOP: c.41.1.1 PDB: 1af4_A* 1be8_A* 1bfk_A 1bfu_A 1be6_A 1oyv_A 1cse_E 1sbc_A 1sca_A 1scb_A 1scd_A 2sec_E 2wuv_A 2wuw_E 1yu6_A 1scn_E* 1c3l_A 1avt_A* 1av7_A* 1sel_A ...
Probab=99.83 E-value=4.3e-21 Score=179.40 Aligned_cols=99 Identities=37% Similarity=0.545 Sum_probs=89.3
Q ss_pred eeecCCCCeeecccCCCCCCCCCCCcCCcEEeCCCceeeccCCCCCCCcCcccccceeeEEeCCccchHHHHHHHHHHHH
Q 044126 50 VIKDSDAPIVASFSSRGPNKYVPDILKPDISAPGVNILAAYSPLAPVSRDIEDERHVKYNIISGTSMACPHAAGVAAYVK 129 (333)
Q Consensus 50 ~~~~~~~~~va~fSs~Gp~~~~~~~lKPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~ 129 (333)
|...+..+.++.||++||.+ ||+|||++|+++++. +.|..++|||||||||||++|||+
T Consensus 176 Vga~~~~~~~~~~S~~G~~~--------di~APG~~i~s~~~~-------------~~~~~~sGTS~AaP~vaG~aAll~ 234 (274)
T 1r0r_E 176 VGAVDSNSNRASFSSVGAEL--------EVMAPGAGVYSTYPT-------------NTYATLNGTSMASPHVAGAAALIL 234 (274)
T ss_dssp EEEECTTSCBCTTCCCSTTE--------EEEEECSSEEEEETT-------------TEEEEECSHHHHHHHHHHHHHHHH
T ss_pred EEEecCCCCcCccCCCCCCc--------eEEeCCCCeEeecCC-------------CCEEEeccHHHHHHHHHHHHHHHH
Confidence 33467788999999999854 999999999999875 479999999999999999999999
Q ss_pred hhCCCCCHHHHHHHHHhcCCCCCCCCCCCCccccCCCCcCccccCC
Q 044126 130 SFHPDWSPSAIKSAIMTTAWPMNSSKNTQAEFAYGSGHINPVKAIN 175 (333)
Q Consensus 130 ~~~p~~sp~~ik~~L~~tA~~~~~~~~~~~~~~~G~G~id~~~A~~ 175 (333)
+++|++++.|||++|++||+++. .+..||+|+||+.+|++
T Consensus 235 ~~~p~lt~~~v~~~L~~tA~~~g------~~~~~G~G~~~~~~A~~ 274 (274)
T 1r0r_E 235 SKHPNLSASQVRNRLSSTATYLG------SSFYYGKGLINVEAAAQ 274 (274)
T ss_dssp HHSTTCCHHHHHHHHHHTCBCCS------CHHHHTTCBCCHHHHTC
T ss_pred HHCCCCCHHHHHHHHHHhCcccC------CCCCcccCccCHHHHhC
Confidence 99999999999999999999874 46889999999999975
No 10
>1to2_E Subtilisin BPN'; serine protease, hydrolase; HET: CIT 15P; 1.30A {Bacillus amyloliquefaciens} SCOP: c.41.1.1 PDB: 1tm1_E* 1tm3_E* 1tm4_E* 1lw6_E* 1tm7_E* 1tmg_E* 1to1_E* 1tm5_E* 1y1k_E* 1y33_E* 1y34_E* 1y3b_E* 1y3c_E* 1y3d_E* 1y3f_E* 1y48_E* 1y4a_E* 1y4d_E 1sup_A* 1sib_E ...
Probab=99.83 E-value=6.8e-21 Score=178.75 Aligned_cols=101 Identities=40% Similarity=0.583 Sum_probs=90.8
Q ss_pred eeecCCCCeeecccCCCCCCCCCCCcCCcEEeCCCceeeccCCCCCCCcCcccccceeeEEeCCccchHHHHHHHHHHHH
Q 044126 50 VIKDSDAPIVASFSSRGPNKYVPDILKPDISAPGVNILAAYSPLAPVSRDIEDERHVKYNIISGTSMACPHAAGVAAYVK 129 (333)
Q Consensus 50 ~~~~~~~~~va~fSs~Gp~~~~~~~lKPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~ 129 (333)
|...+..+.++.||++||.+ ||+|||++|+++++. +.|..++|||||||||||++|||+
T Consensus 177 Vga~~~~~~~~~fS~~G~~~--------di~APG~~i~s~~~~-------------~~~~~~sGTS~AaP~vaG~aAll~ 235 (281)
T 1to2_E 177 VGAVDSSNQRASFSSVGPEL--------DVMAPGVSIQSTLPG-------------NKYGAYNGTSMASPHVAGAAALIL 235 (281)
T ss_dssp EEEECTTSCBCTTCCCSTTC--------CEEEECSSEEEEETT-------------TEEEEECBHHHHHHHHHHHHHHHH
T ss_pred EEEecCCCCcCCcCCCCCCc--------eEEecCCCeEeecCC-------------CCEEecCcHHHHHHHHHHHHHHHH
Confidence 33467788999999999964 999999999999875 478999999999999999999999
Q ss_pred hhCCCCCHHHHHHHHHhcCCCCCCCCCCCCccccCCCCcCccccCCCC
Q 044126 130 SFHPDWSPSAIKSAIMTTAWPMNSSKNTQAEFAYGSGHINPVKAINPG 177 (333)
Q Consensus 130 ~~~p~~sp~~ik~~L~~tA~~~~~~~~~~~~~~~G~G~id~~~A~~~~ 177 (333)
+++|+|++.|||++|++||+++. .+..||+|+||+.+|++..
T Consensus 236 ~~~p~lt~~~v~~~L~~tA~~~g------~~~~~G~G~v~~~~a~~~~ 277 (281)
T 1to2_E 236 SKHPNWTNTQVRSSLENTTTKLG------DSFYYGKGLINVQAAAQHH 277 (281)
T ss_dssp HHSTTCCHHHHHHHHHTTCBCCS------CHHHHTTCBCCHHHHTSSS
T ss_pred HhCCCCCHHHHHHHHHhhCcccC------CCCCcccceecHHHHhhhh
Confidence 99999999999999999999874 4688999999999999854
No 11
>1wmd_A Protease; alpha-beta hydrolase fold, jelly-roll beta-barrel, hydrolase; 1.30A {Bacillus SP} SCOP: b.18.1.20 c.41.1.1 PDB: 1wme_A 1wmf_A
Probab=99.83 E-value=3.4e-21 Score=190.90 Aligned_cols=116 Identities=37% Similarity=0.456 Sum_probs=95.5
Q ss_pred CCeeecccCCCCCCCCCCCcCCcEEeCCCceeeccCCCCCCCcCcccccceeeEEeCCccchHHHHHHHHHHHHhhCCCC
Q 044126 56 APIVASFSSRGPNKYVPDILKPDISAPGVNILAAYSPLAPVSRDIEDERHVKYNIISGTSMACPHAAGVAAYVKSFHPDW 135 (333)
Q Consensus 56 ~~~va~fSs~Gp~~~~~~~lKPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~p~~ 135 (333)
.+.++.||++||+. ++++||||+|||++|++++......... .....+.|..++|||||||||||++|||+|++|++
T Consensus 199 ~~~~a~fS~~G~~~--~g~~kpdi~ApG~~i~s~~~~~~~~~~~-~~~~~~~~~~~sGTS~AaP~vaG~aAll~~~~~~~ 275 (434)
T 1wmd_A 199 INHVAQFSSRGPTK--DGRIKPDVMAPGTFILSARSSLAPDSSF-WANHDSKYAYMGGTSMATPIVAGNVAQLREHFVKN 275 (434)
T ss_dssp TTSBCTTSCCCCCT--TSCCCCCEEEECSSEEEECCTTCCGGGS-SEEEETTEEEECSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCccccccCCCCCC--CCCCCceEEcCCCCeEecCCCCCCCccc-ccCCCCceEeecchhHHHHHHHHHHHHHHHHHHhc
Confidence 68999999999986 7999999999999999998643211000 00113579999999999999999999999998865
Q ss_pred -----CHHHHHHHHHhcCCCCCCCCCCCCccccCCCCcCccccCCCC
Q 044126 136 -----SPSAIKSAIMTTAWPMNSSKNTQAEFAYGSGHINPVKAINPG 177 (333)
Q Consensus 136 -----sp~~ik~~L~~tA~~~~~~~~~~~~~~~G~G~id~~~A~~~~ 177 (333)
++++||++|+++|+++.. ......+|+|++|+.+|++..
T Consensus 276 ~~~~~s~~~vk~~L~~tA~~~~~---~~~~~~~G~G~vd~~~a~~~~ 319 (434)
T 1wmd_A 276 RGITPKPSLLKAALIAGAADIGL---GYPNGNQGWGRVTLDKSLNVA 319 (434)
T ss_dssp SSSCCCHHHHHHHHHHHCBCCSS---CSSCTTTTTCBCCHHHHHTCE
T ss_pred cCCCCCHHHHHHHHHcCCcccCC---CCCCccCCcCeEeHHHhcccc
Confidence 899999999999988643 246789999999999999754
No 12
>2iy9_A SUBA; toxin, shiga, plasmid; 1.8A {Escherichia coli}
Probab=99.82 E-value=4.4e-21 Score=184.61 Aligned_cols=101 Identities=28% Similarity=0.199 Sum_probs=89.7
Q ss_pred cCC--CCeee-------cccCCCCCCCCCCCcCCcEEeCCCceeeccCCCCCCCcCcccccceeeEEeCCccchHHHHHH
Q 044126 53 DSD--APIVA-------SFSSRGPNKYVPDILKPDISAPGVNILAAYSPLAPVSRDIEDERHVKYNIISGTSMACPHAAG 123 (333)
Q Consensus 53 ~~~--~~~va-------~fSs~Gp~~~~~~~lKPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG 123 (333)
.+. .+.++ .||++||. ||||+|||++|+++++. +.|..++|||||||||||
T Consensus 221 ~~~~~~g~~~~~~~~~~~fS~~G~~-------~~di~APG~~i~s~~~~-------------~~~~~~sGTS~AaP~VaG 280 (347)
T 2iy9_A 221 LAQYRKGETPVLHGGGITGSRFGNN-------WVDIAAPGQNITFLRPD-------------AKTGTGSGTSEATAIVSG 280 (347)
T ss_dssp ECCCCTTSCCCBCCCSSSCBCBCTT-------TCSEEEECSSEEEECTT-------------SCEEEECSHHHHHHHHHH
T ss_pred cccCCCCceecccCCCCCCCCCCCC-------CCEEEeCCCCeEeecCC-------------CCeEeccchHHHHHHHHH
Confidence 455 67788 99999984 67999999999999875 468999999999999999
Q ss_pred HHHHHHhhCCCCCHHHHHHHHHhcCCCCCCCCCCCCccccCCCCcCccccCCCC
Q 044126 124 VAAYVKSFHPDWSPSAIKSAIMTTAWPMNSSKNTQAEFAYGSGHINPVKAINPG 177 (333)
Q Consensus 124 ~aALl~~~~p~~sp~~ik~~L~~tA~~~~~~~~~~~~~~~G~G~id~~~A~~~~ 177 (333)
++|||++++|++++.|||++|++||+++... ....+|+|+||+.+|++..
T Consensus 281 ~aAll~~~~p~lt~~~v~~~L~~tA~~~~~~----~~~~~G~G~ld~~~A~~~~ 330 (347)
T 2iy9_A 281 VLAAMTSCNPRATATELKRTLLESADKYPSL----VDKVTEGRVLNAEKAISMF 330 (347)
T ss_dssp HHHHHHHHCTTSCHHHHHHHHHHHSEECGGG----TTTSGGGEECCHHHHHHHH
T ss_pred HHHHHHHhCCCCCHHHHHHHHHHhCccCCCC----CCccccCCEecHHHHHHHH
Confidence 9999999999999999999999999987653 3468999999999999843
No 13
>1dbi_A AK.1 serine protease; hydrolase; 1.80A {Bacillus SP} SCOP: c.41.1.1
Probab=99.82 E-value=1.6e-20 Score=176.04 Aligned_cols=127 Identities=28% Similarity=0.318 Sum_probs=95.5
Q ss_pred cccceeEeecHHHHHHHHHHHhccCCCCCceeecceeeeecCCCCeeecccCCCCCCCCCCCcCCcEEeCCCceeeccCC
Q 044126 13 KLDWCIKVWCEEEEARLADAIIGSDTKNPQAEILKTSVIKDSDAPIVASFSSRGPNKYVPDILKPDISAPGVNILAAYSP 92 (333)
Q Consensus 13 ~~~~~~~~~~~~~g~~l~~y~~~~s~~~~~~~i~~~~~~~~~~~~~va~fSs~Gp~~~~~~~lKPDI~APG~~I~sa~~~ 92 (333)
+.++.+++.+.++|.....|- .... ....|...+..+.++.||++||.+ ||+|||++|+++++.
T Consensus 153 ~~gilvV~AAGN~g~~~~~~P--a~~~------~vi~Vga~~~~~~~~~~S~~G~~~--------dv~ApG~~i~s~~~~ 216 (280)
T 1dbi_A 153 NKGSVVVAAAGNNGSSTTFEP--ASYE------NVIAVGAVDQYDRLASFSNYGTWV--------DVVAPGVDIVSTITG 216 (280)
T ss_dssp HTTCEEEEECCBC-----------CCT------TSEEEEEECTTSCBCTTBCCSTTC--------CEEEECSSEEEEETT
T ss_pred HCCCEEEEECCCCCCCCCCCc--cccC------CeEEEEeeCCCCCcCCCCCCCCCc--------eEEEecCCeEeecCC
Confidence 345556666666665433333 1111 112333456778999999999865 999999999999865
Q ss_pred CCCCCcCcccccceeeEEeCCccchHHHHHHHHHHHHhhCCCCCHHHHHHHHHhcCCCCCCCCCCCCccccCCCCcCccc
Q 044126 93 LAPVSRDIEDERHVKYNIISGTSMACPHAAGVAAYVKSFHPDWSPSAIKSAIMTTAWPMNSSKNTQAEFAYGSGHINPVK 172 (333)
Q Consensus 93 ~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~p~~sp~~ik~~L~~tA~~~~~~~~~~~~~~~G~G~id~~~ 172 (333)
+.|..++|||||||||||++|||++ |.+++.|||++|++||+++... ...+|+|+||+.+
T Consensus 217 -------------~~~~~~sGTS~AaP~vaG~aAll~~--p~~t~~~v~~~L~~ta~~~~~~-----~~~~G~G~vn~~~ 276 (280)
T 1dbi_A 217 -------------NRYAYMSGTSMASPHVAGLAALLAS--QGRNNIEIRQAIEQTADKISGT-----GTYFKYGRINSYN 276 (280)
T ss_dssp -------------TEEEEECSHHHHHHHHHHHHHHHHH--TTCCHHHHHHHHHHTSBCCTTB-----TTTBSSEECCHHH
T ss_pred -------------CCEEEccCHHHHHHHHHHHHHHHHC--CCCCHHHHHHHHHHhCccCCCC-----CCcccCCEECHHH
Confidence 4799999999999999999999987 8999999999999999988642 4679999999999
Q ss_pred cCC
Q 044126 173 AIN 175 (333)
Q Consensus 173 A~~ 175 (333)
|++
T Consensus 277 A~~ 279 (280)
T 1dbi_A 277 AVT 279 (280)
T ss_dssp HHT
T ss_pred Hhc
Confidence 975
No 14
>2x8j_A Intracellular subtilisin protease; hydrolase, serine protease, intracellular proteinase regulat; HET: CSX 1PE; 1.56A {Bacillus clausii} PDB: 2wv7_A 2wwt_A 2xrm_A*
Probab=99.81 E-value=1.2e-20 Score=180.69 Aligned_cols=134 Identities=24% Similarity=0.275 Sum_probs=97.7
Q ss_pred cccceeEeecHHHHHHHHHHHhccCCCCCceeecc-eeeeecCCCCeeecccCCCCCCCCCCCcCCcEEeCCCceeeccC
Q 044126 13 KLDWCIKVWCEEEEARLADAIIGSDTKNPQAEILK-TSVIKDSDAPIVASFSSRGPNKYVPDILKPDISAPGVNILAAYS 91 (333)
Q Consensus 13 ~~~~~~~~~~~~~g~~l~~y~~~~s~~~~~~~i~~-~~~~~~~~~~~va~fSs~Gp~~~~~~~lKPDI~APG~~I~sa~~ 91 (333)
..++.+++.+.++|....... .-..| +.... .+|...+..+.++.||++||. |||+|||++|+++++
T Consensus 172 ~~gi~vV~AAGN~g~~~~~~~---~~~~P-a~~~~vi~Vga~~~~~~~~~fS~~G~~--------~di~APG~~i~s~~~ 239 (327)
T 2x8j_A 172 SNNVSVVCAAGNEGDGREDTN---EFAYP-AAYNEVIAVGAVDFDLRLSDFTNTNEE--------IDIVAPGVGIKSTYL 239 (327)
T ss_dssp HTTCEEEEECCCT------------TCBT-TTSTTSEEEEEECTTCCBSCC---CCC--------CSEEEECSSEEEECS
T ss_pred HCCCeEEEEcCCCCCCCCCCC---ceecc-ccCCCEEEEEEECCCCCCCCccCCCCC--------ceEecCcCceEeecC
Confidence 455666666677665432111 00001 11112 234446778899999999985 499999999999986
Q ss_pred CCCCCCcCcccccceeeEEeCCccchHHHHHHHHHHHHhh-----CCCCCHHHHHHHHHhcCCCCCCCCCCCCccccCCC
Q 044126 92 PLAPVSRDIEDERHVKYNIISGTSMACPHAAGVAAYVKSF-----HPDWSPSAIKSAIMTTAWPMNSSKNTQAEFAYGSG 166 (333)
Q Consensus 92 ~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~-----~p~~sp~~ik~~L~~tA~~~~~~~~~~~~~~~G~G 166 (333)
. +.|..++|||||||||||++|||+++ +|.+++.+||++|++||.++.. +...+|+|
T Consensus 240 ~-------------~~~~~~sGTS~AaP~VaG~aAll~~~~~~~~~p~ls~~~v~~~L~~tA~~~g~-----~~~~~G~G 301 (327)
T 2x8j_A 240 D-------------SGYAELSGTAMAAPHVAGALALIINLAEDAFKRSLSETEIYAQLVRRATPIGF-----TAQAEGNG 301 (327)
T ss_dssp T-------------TCEEEEESGGGTHHHHHHHHHHHHHHHHHHHTSCCCHHHHHHHHHTTEECCSS-----CHHHHTTC
T ss_pred C-------------CCEEeecCHHHHHHHHHHHHHHHHHhhhhhcCCCCCHHHHHHHHHHhCccCCC-----CCCceeee
Confidence 5 36899999999999999999999999 9999999999999999998753 47889999
Q ss_pred CcCccccCCC
Q 044126 167 HINPVKAINP 176 (333)
Q Consensus 167 ~id~~~A~~~ 176 (333)
++|+.+|++.
T Consensus 302 ~vd~~~A~~~ 311 (327)
T 2x8j_A 302 FLTLDLVERI 311 (327)
T ss_dssp EECTTHHHHH
T ss_pred EECHHHHHHh
Confidence 9999999873
No 15
>4h6w_A N-terminal cyanobactin protease; hydrolase; 2.45A {Planktothrix agardhii nies-596}
Probab=99.81 E-value=8.4e-21 Score=179.23 Aligned_cols=106 Identities=32% Similarity=0.353 Sum_probs=91.1
Q ss_pred eecCCCCeeecccCCCCCCCCCCCcCCcEEeCCCceeeccCCCCCCCcCcccccceeeEEeCCccchHHHHHHHHHHHHh
Q 044126 51 IKDSDAPIVASFSSRGPNKYVPDILKPDISAPGVNILAAYSPLAPVSRDIEDERHVKYNIISGTSMACPHAAGVAAYVKS 130 (333)
Q Consensus 51 ~~~~~~~~va~fSs~Gp~~~~~~~lKPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~ 130 (333)
...+..+.+++||++|+.. .||||+|||++|+++++. +.|..++|||||||||||++|||++
T Consensus 178 ga~~~~~~~~~~s~~g~~~-----~~~di~APG~~i~s~~~~-------------~~~~~~sGTS~AaP~VaG~~All~s 239 (306)
T 4h6w_A 178 GAMDDQGKPVDFSNWGDAY-----QKQGILAPGKDILGAKPN-------------GGTIRLSGTSFATPIVSGVAALLLS 239 (306)
T ss_dssp EEECTTSCBCSSSCBCHHH-----HHHEEEEECSSEEEECTT-------------SCEEEECSHHHHHHHHHHHHHHHHH
T ss_pred EEecCCCCccccccccCCc-----CcceeecCCcCcccccCC-------------CceeccCCCcchhHHHHHHHHHHHH
Confidence 3467788999999999753 588999999999999876 4799999999999999999999986
Q ss_pred h----CCCCCHHHHHHHHHhcCCCCCCCCCCCCccccCCCCcCccccCC
Q 044126 131 F----HPDWSPSAIKSAIMTTAWPMNSSKNTQAEFAYGSGHINPVKAIN 175 (333)
Q Consensus 131 ~----~p~~sp~~ik~~L~~tA~~~~~~~~~~~~~~~G~G~id~~~A~~ 175 (333)
+ +|.++|+|||++|++||+++.... ......||+|+||+.+|++
T Consensus 240 ~~~~~~p~~t~~~v~~~L~~tA~~~~~~~-~~~~~~~G~G~ln~~~Av~ 287 (306)
T 4h6w_A 240 LQIKRGEKPDPQKVKNALLASATPCNPKD-TDDQSRCLMGKLNILDAIE 287 (306)
T ss_dssp HHHHTTCCCCHHHHHHHHHHTCBCCCTTT-CSCGGGGTTCBCCHHHHHH
T ss_pred HHHhhCCCCCHHHHHHHHHhhCccCCCCC-CCCCCCcceeecCHHHHHH
Confidence 4 699999999999999999886532 2345679999999999987
No 16
>1r6v_A Subtilisin-like serine protease; sandwich domain, propeptide, hydrolase; 1.70A {Fervidobacterium pennivorans} SCOP: c.41.1.1
Probab=99.80 E-value=2.5e-20 Score=193.68 Aligned_cols=119 Identities=28% Similarity=0.397 Sum_probs=96.5
Q ss_pred eeecccCCCCCCCCCCCcCCcEEeCCCceeeccCCCCCCC-----cCcccccceeeEEeCCccchHHHHHHHHHHHHhhC
Q 044126 58 IVASFSSRGPNKYVPDILKPDISAPGVNILAAYSPLAPVS-----RDIEDERHVKYNIISGTSMACPHAAGVAAYVKSFH 132 (333)
Q Consensus 58 ~va~fSs~Gp~~~~~~~lKPDI~APG~~I~sa~~~~~~~~-----~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~ 132 (333)
.++.||++||.+ ||+|||++|+++++...... ........+.|..++|||||||||||++|||++++
T Consensus 327 ~~a~fSn~G~~v--------dv~APG~~I~St~p~~~~~g~~~~~~~~~~~~~~~y~~~sGTSmAAP~VAGvaALl~s~~ 398 (671)
T 1r6v_A 327 RVAGFSSRSDGV--------SVGAPGVTILSTVPGEDSIGYEGHNENVPATNGGTYDYYQGTSMAAPHVTGVVAVLLQKF 398 (671)
T ss_dssp EECSSSCCCTTE--------EEEEECSSEEEECCCTTSTTCCCCCTTCCCSSSCCEEEEESHHHHHHHHHHHHHHHHHHC
T ss_pred eeccccCCCCCe--------eEEecCCCEEeecCCCCccccccccccccccCCCceEEecCccHHHHHHHHHHHHHHHHC
Confidence 389999999976 99999999999987532110 00011123579999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCCCCCCCCCCCCccccCCCCcCccccCCCCccccCchhhH
Q 044126 133 PDWSPSAIKSAIMTTAWPMNSSKNTQAEFAYGSGHINPVKAINPGLVYGAFKQDY 187 (333)
Q Consensus 133 p~~sp~~ik~~L~~tA~~~~~~~~~~~~~~~G~G~id~~~A~~~~lv~d~~~~dy 187 (333)
|++++.|||++|++||.++... ..+..+|+|+||+.+|++..|..+....+|
T Consensus 399 P~lt~~~Vr~~L~~TA~~~~~~---g~d~~~G~G~vna~~Al~~~l~~~~~~~~~ 450 (671)
T 1r6v_A 399 PNAKPWQIRKLLENTAFDFNGN---GWDHDTGYGLVKLDAALQGPLPTQGGVEEF 450 (671)
T ss_dssp TTCCHHHHHHHHHHHCBCSSSS---SCBTTTBTCBCCHHHHHHCCCCSSSEEEEE
T ss_pred CCCCHHHHHHHHHHhCcCCCCC---CCCCCcccceeCHHHHhhhhcCCCCCccce
Confidence 9999999999999999987653 456789999999999999888766554444
No 17
>3lpc_A APRB2; protease, subtilase, virulence factor, hydrolase; 1.70A {Dichelobacter nodosus} PDB: 3lpa_A 3lpd_A 3ti9_A 3ti7_A
Probab=99.80 E-value=3.7e-20 Score=177.46 Aligned_cols=110 Identities=35% Similarity=0.503 Sum_probs=92.7
Q ss_pred eeecCCCCeeecccCCCCCCCCCCCcCCcEEeCCCceeeccCCCCCCCcCcccccceeeEEeCCccchHHHHHHHHHHHH
Q 044126 50 VIKDSDAPIVASFSSRGPNKYVPDILKPDISAPGVNILAAYSPLAPVSRDIEDERHVKYNIISGTSMACPHAAGVAAYVK 129 (333)
Q Consensus 50 ~~~~~~~~~va~fSs~Gp~~~~~~~lKPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~ 129 (333)
|...+..+.++.||++||. |||+|||++|++++..... ......|..++|||||||||||++|||+
T Consensus 225 Vga~~~~~~~~~~S~~g~~--------~di~ApG~~i~s~~~~~~~------~~~~~~~~~~sGTS~AaP~vaG~aAll~ 290 (340)
T 3lpc_A 225 VGATTSRGIRASFSNYGVD--------VDLAAPGQDILSTVDSGTR------RPVSDAYSFMAGTSMATPHVSGVAALVI 290 (340)
T ss_dssp EEEECTTSSBCTTCCBSTT--------CCEEEECSSEEEEEESCSS------SCCSEEEEEECSHHHHHHHHHHHHHHHH
T ss_pred EecCCCCCCcCCCCCCCCC--------ceEEecCCCeecccCCCCc------CCCCCcceecccHhHHHHHHHHHHHHHH
Confidence 3346778899999999974 5999999999999876421 1123569999999999999999999999
Q ss_pred hh-C---CCCCHHHHHHHHHhcCCCCCCCCCCCCccccCCCCcCccccCCCC
Q 044126 130 SF-H---PDWSPSAIKSAIMTTAWPMNSSKNTQAEFAYGSGHINPVKAINPG 177 (333)
Q Consensus 130 ~~-~---p~~sp~~ik~~L~~tA~~~~~~~~~~~~~~~G~G~id~~~A~~~~ 177 (333)
++ + |.+++.+||++|++||+++... ....+|+|+||+.+|++..
T Consensus 291 ~~~~~~~p~lt~~~v~~~L~~tA~~~~~~----~~~~~G~G~vd~~~Av~~~ 338 (340)
T 3lpc_A 291 SAANSVNKNLTPAELKDVLVSTTSPFNGR----LDRALGSGIVDAEAAVNSV 338 (340)
T ss_dssp HHHHHTTCCCCHHHHHHHHHHTCBCCSSC----CSSCCCSSBCCHHHHHHHH
T ss_pred HhhhhhCCCCCHHHHHHHHHhcCCcCCCC----CCCCcccceecHHHHHHHH
Confidence 98 5 9999999999999999988643 5678999999999998743
No 18
>2ixt_A 36KDA protease; serine protease, sphericase, subtilisin like protease, hydrolase; 0.8A {Bacillus sphaericus} SCOP: c.41.1.1 PDB: 3d43_A 1ea7_A* 2gko_A*
Probab=99.80 E-value=8.3e-20 Score=172.96 Aligned_cols=103 Identities=31% Similarity=0.403 Sum_probs=87.1
Q ss_pred CCC--eeecccCCCCCCCC----CCCcCCcEEeCCCceeeccCCCCCCCcCcccccceeeEEeCCccchHHHHHHHHHHH
Q 044126 55 DAP--IVASFSSRGPNKYV----PDILKPDISAPGVNILAAYSPLAPVSRDIEDERHVKYNIISGTSMACPHAAGVAAYV 128 (333)
Q Consensus 55 ~~~--~va~fSs~Gp~~~~----~~~lKPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl 128 (333)
..+ .++.||++||.... ....||||+|||++|+++++. +.|..++|||||||||||++|||
T Consensus 197 ~~g~~~~~~~S~~G~~~~~g~~~~~~~~~di~ApG~~i~s~~~~-------------~~~~~~sGTS~AaP~vaG~aAll 263 (310)
T 2ixt_A 197 QNGTYRVADYSSRGYISTAGDYVIQEGDIEISAPGSSVYSTWYN-------------GGYNTISGTSMATPHVSGLAAKI 263 (310)
T ss_dssp ETTEEEECTTSCCCCTTTTTSSSCCTTCCCEEEECSSEEEECTT-------------SSEEEECSHHHHHHHHHHHHHHH
T ss_pred cCCCeeeccccCCCCccCCccccccCCCeeEECCCCCEeeecCC-------------CCEEeeccHHHHHHHHHHHHHHH
Confidence 455 89999999995321 123499999999999999865 46899999999999999999999
Q ss_pred HhhCCCCCHHHHHHHHHhcCCCCCCCC----CCCCccccCCCCcCc
Q 044126 129 KSFHPDWSPSAIKSAIMTTAWPMNSSK----NTQAEFAYGSGHINP 170 (333)
Q Consensus 129 ~~~~p~~sp~~ik~~L~~tA~~~~~~~----~~~~~~~~G~G~id~ 170 (333)
++++|++++.+||++|++||+++.... .+..+..+|+|++|+
T Consensus 264 ~~~~p~lt~~~v~~~L~~tA~~~~~~~~~~a~~g~d~~~G~G~~~v 309 (310)
T 2ixt_A 264 WAENPSLSNTQLRSNLQERAKSVDIKGGYGAAIGDDYASGFGFARV 309 (310)
T ss_dssp HHHSTTCCHHHHHHHHHHHHHTSCCCBSTTCCSSSBTTTBTCBCCC
T ss_pred HHhCCCCCHHHHHHHHHhhCcccCCCCCcccccCCccccccceeec
Confidence 999999999999999999998775322 156788999999986
No 19
>3zxy_A Subtilisin-like protein; hydrolase; 1.58A {Prochloron didemni} PDB: 3zxx_A
Probab=99.79 E-value=2e-20 Score=175.03 Aligned_cols=107 Identities=26% Similarity=0.309 Sum_probs=88.9
Q ss_pred eeecCCCCeeecccCCCCCCCCCCCcCCcEEeCCCceeeccCCCCCCCcCcccccceeeEEeCCccchHHHHHHHHHHHH
Q 044126 50 VIKDSDAPIVASFSSRGPNKYVPDILKPDISAPGVNILAAYSPLAPVSRDIEDERHVKYNIISGTSMACPHAAGVAAYVK 129 (333)
Q Consensus 50 ~~~~~~~~~va~fSs~Gp~~~~~~~lKPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~ 129 (333)
|...+..+.++.||+||+. ..||||+|||++|+++++. +.|..++|||||||||||++|||+
T Consensus 164 Vga~~~~~~~~~~S~~~~~-----~~~~di~ApG~~i~s~~~~-------------~~~~~~sGTS~AaP~vaG~aAll~ 225 (282)
T 3zxy_A 164 VGAMDDHGHPLDFSNWGST-----YEQQGILAPGEDILGAKPG-------------GGTERLSGTAFATPIVSGVAALLL 225 (282)
T ss_dssp EEEECTTSCBCSSSCCCHH-----HHHHEEEEECSSEEEECTT-------------SCEEEECSHHHHHHHHHHHHHHHH
T ss_pred EEEEcCCCccccccCCCCC-----ccccceeccCcceeeecCC-------------CceeecCCCcccchHHHHHHHHHH
Confidence 3346778999999999975 3578999999999999876 468999999999999999999999
Q ss_pred hhC----CCCCHHHHHHHHHhcCCCCCCCCCCCCccccCCCCcCccccCC
Q 044126 130 SFH----PDWSPSAIKSAIMTTAWPMNSSKNTQAEFAYGSGHINPVKAIN 175 (333)
Q Consensus 130 ~~~----p~~sp~~ik~~L~~tA~~~~~~~~~~~~~~~G~G~id~~~A~~ 175 (333)
+++ |.++|+|||++|++||+++.... +.....+|+|+||+.+|++
T Consensus 226 ~~~~~~~~~~~~~~vk~~L~~tA~~~~~~~-~~~~~~~G~G~ln~~~A~~ 274 (282)
T 3zxy_A 226 SEQVRRGETPDPQKVRQLLLQSALPCDDDA-PEQARRCLAGRLNVSGAFT 274 (282)
T ss_dssp HHHHHTTCCCCHHHHHHHHHHHCBCC--------CGGGTTCBCCHHHHHH
T ss_pred HHhHhhCCCCCHHHHHHHHHhhCeeCCCCC-CCccCceeeeEeCHHHHHH
Confidence 875 78999999999999999875431 3456789999999999986
No 20
>2z2z_A TK-subtilisin precursor; thermococcus kodakaraensis, hydrolase; 1.87A {Thermococcus kodakarensis} PDB: 2e1p_A 2zwp_A 2zwo_A
Probab=99.79 E-value=1.9e-20 Score=183.62 Aligned_cols=101 Identities=33% Similarity=0.509 Sum_probs=89.7
Q ss_pred eeecCCCCeeecccCCCCCCCCCCCcCCcEEeCCCceeeccCCCCCCCcCcccccceeeEEeCCccchHHHHHHHHHHHH
Q 044126 50 VIKDSDAPIVASFSSRGPNKYVPDILKPDISAPGVNILAAYSPLAPVSRDIEDERHVKYNIISGTSMACPHAAGVAAYVK 129 (333)
Q Consensus 50 ~~~~~~~~~va~fSs~Gp~~~~~~~lKPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~ 129 (333)
|...+..+.++.||++|| +|+|||++|+++++. +.|..++|||||||||||++|||+
T Consensus 279 Vga~~~~~~~a~fS~~G~----------~v~APG~~i~s~~~~-------------~~y~~~sGTS~AaP~VaG~aAll~ 335 (395)
T 2z2z_A 279 VGAIDSNDNIASFSNRQP----------EVSAPGVDILSTYPD-------------DSYETLMGTAMATPHVSGVVALIQ 335 (395)
T ss_dssp EEEECTTSCBCTTSCSSC----------SEEEECSSEEEEETT-------------TEEEEEESHHHHHHHHHHHHHHHH
T ss_pred EEEecCCCCCCcccCCCC----------CEEeCCCCeeeecCC-------------CceEecCCHHHHHHHHHHHHHHHH
Confidence 334677899999999997 479999999999875 479999999999999999999999
Q ss_pred hhCC-------------CCCHHHHHHHHHhcCCCCCCCCCCCCccccCCCCcCccccCCC
Q 044126 130 SFHP-------------DWSPSAIKSAIMTTAWPMNSSKNTQAEFAYGSGHINPVKAINP 176 (333)
Q Consensus 130 ~~~p-------------~~sp~~ik~~L~~tA~~~~~~~~~~~~~~~G~G~id~~~A~~~ 176 (333)
+++| .|++.+||++|++||+++... ..+..||+|+||+.+|++.
T Consensus 336 ~~~p~~~~~~~~~~~~~~ls~~~v~~~L~~tA~~~~~~---g~~~~~G~G~vd~~~A~~~ 392 (395)
T 2z2z_A 336 AAYYQKYGKILPVGTFDDISKNTVRGILHITADDLGPT---GWDADYGYGVVRAALAVQA 392 (395)
T ss_dssp HHHHHHHSSCCCCCCTTCCSSSSHHHHHHHHSBCCSSS---SSBTTTBTCBCCHHHHHHH
T ss_pred HhCccccccccccccccCCCHHHHHHHHHhhccccCCC---CCCCCccCceeCHHHHHHH
Confidence 9999 999999999999999988643 4578899999999999874
No 21
>1thm_A Thermitase; hydrolase(serine protease); 1.37A {Thermoactinomyces vulgaris} SCOP: c.41.1.1 PDB: 2tec_E 1tec_E 3tec_E
Probab=99.79 E-value=9e-20 Score=170.82 Aligned_cols=98 Identities=36% Similarity=0.509 Sum_probs=86.5
Q ss_pred eeecCCCCeeecccCCCCCCCCCCCcCCcEEeCCCceeeccCCCCCCCcCcccccceeeEEeCCccchHHHHHHHHHHHH
Q 044126 50 VIKDSDAPIVASFSSRGPNKYVPDILKPDISAPGVNILAAYSPLAPVSRDIEDERHVKYNIISGTSMACPHAAGVAAYVK 129 (333)
Q Consensus 50 ~~~~~~~~~va~fSs~Gp~~~~~~~lKPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~ 129 (333)
|...+..+.++.||++|+.+ ||+|||++|+++++. +.|..++|||||||||||++|||
T Consensus 181 Vga~~~~~~~~~fS~~G~~~--------dv~APG~~i~s~~~~-------------~~~~~~sGTS~AaP~VaG~aAll- 238 (279)
T 1thm_A 181 VASTDQNDNKSSFSTYGSWV--------DVAAPGSSIYSTYPT-------------STYASLSGTSMATPHVAGVAGLL- 238 (279)
T ss_dssp EEEECTTSCBCTTCCCCTTC--------CEEEECSSEEEEETT-------------TEEEEECSHHHHHHHHHHHHHHH-
T ss_pred EEEeCCCCCcCCcCCCCCce--------EEEEcCCCeEEEeCC-------------CCEEEcccHHHHHHHHHHHHHHH-
Confidence 33467788999999999865 999999999999875 47999999999999999999999
Q ss_pred hhCCCCCHHHHHHHHHhcCCCCCCCCCCCCccccCCCCcCccccCC
Q 044126 130 SFHPDWSPSAIKSAIMTTAWPMNSSKNTQAEFAYGSGHINPVKAIN 175 (333)
Q Consensus 130 ~~~p~~sp~~ik~~L~~tA~~~~~~~~~~~~~~~G~G~id~~~A~~ 175 (333)
++|.+++.+||++|++||+++... ...||+|+||+.+|++
T Consensus 239 -~~p~~t~~~v~~~L~~ta~~~~~~-----~~~~G~G~vn~~~A~~ 278 (279)
T 1thm_A 239 -ASQGRSASNIRAAIENTADKISGT-----GTYWAKGRVNAYKAVQ 278 (279)
T ss_dssp -HTTTCCHHHHHHHHHHTCBCCTTB-----TTTBSSEECCHHHHHH
T ss_pred -HCCCcCHHHHHHHHHHhCccCCCC-----CccccCCeeCHHHHhc
Confidence 579999999999999999988653 3679999999999875
No 22
>3t41_A Epidermin leader peptide processing serine protea; structural genomics, center for structural genomics of infec diseases, csgid; 1.95A {Staphylococcus aureus} PDB: 3qfh_A
Probab=99.79 E-value=1.1e-19 Score=181.57 Aligned_cols=105 Identities=26% Similarity=0.338 Sum_probs=91.8
Q ss_pred eeecCCCCeeecccCCCCCCCCCCCcCCcEEeCCCc----------------------eeeccCCCCCCCcCccccccee
Q 044126 50 VIKDSDAPIVASFSSRGPNKYVPDILKPDISAPGVN----------------------ILAAYSPLAPVSRDIEDERHVK 107 (333)
Q Consensus 50 ~~~~~~~~~va~fSs~Gp~~~~~~~lKPDI~APG~~----------------------I~sa~~~~~~~~~~~~~~~~~~ 107 (333)
|...+..+.++.||++||.. |||+|||++ |+++++. +.
T Consensus 340 VgA~~~~~~~a~fS~~G~~~-------~di~APG~~i~~~~~~g~~~~~~~~~~~~~~i~s~~~~-------------~~ 399 (471)
T 3t41_A 340 VGSTDQKSNLSEFSNFGMNY-------TDIAAPGGSFAYLNQFGVDKWMNEGYMHKENILTTANN-------------GR 399 (471)
T ss_dssp EEEECTTSSBCTTCCBCTTT-------CCEEEECCCCHHHHHHHHHHHHHTTTHHHHSEEEECTT-------------SS
T ss_pred EEeeCCCCCCCCccCCCCCC-------CeEEecCCCcccccccccccccccccccCceeEecCCC-------------CC
Confidence 33467789999999999963 599999987 7777754 46
Q ss_pred eEEeCCccchHHHHHHHHHHHHhhCC-CCCHHHHHHHHHhcCCCCCCCCCCCCccccCCCCcCccccCCCCc
Q 044126 108 YNIISGTSMACPHAAGVAAYVKSFHP-DWSPSAIKSAIMTTAWPMNSSKNTQAEFAYGSGHINPVKAINPGL 178 (333)
Q Consensus 108 y~~~sGTSmAaP~VAG~aALl~~~~p-~~sp~~ik~~L~~tA~~~~~~~~~~~~~~~G~G~id~~~A~~~~l 178 (333)
|..++|||||||||||++|||++++| .++|++||++|+++|.+... .+...||+|+||+.+|++...
T Consensus 400 ~~~~sGTS~AaP~VAG~aAll~~~~p~~~~~~~v~~~L~~tA~~~~~----~~~~~~G~G~vd~~~Al~~a~ 467 (471)
T 3t41_A 400 YIYQAGTALATPKVSGALALIIDKYHLEKHPDKAIELLYQHGTSKNN----KPFSRYGHGELDVYKALNVAN 467 (471)
T ss_dssp EEEECSHHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHHHHHSBCCSC----CCHHHHTTCBBCHHHHTTTTC
T ss_pred EEeecchHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHhCCCCCC----CCcCccccChhCHHHHHHHHH
Confidence 99999999999999999999999999 89999999999999997654 367899999999999998643
No 23
>2z30_A TK-subtilisin; thermococcus kodakaraensis, hydrolase; 1.65A {Thermococcus kodakarensis} PDB: 3a3o_A 3a3n_A 2zrq_A 2z57_A 2z56_A 2z58_A 3a3p_A 2z2x_A* 2z2y_A
Probab=99.78 E-value=4.8e-20 Score=175.81 Aligned_cols=101 Identities=33% Similarity=0.517 Sum_probs=89.3
Q ss_pred eeecCCCCeeecccCCCCCCCCCCCcCCcEEeCCCceeeccCCCCCCCcCcccccceeeEEeCCccchHHHHHHHHHHHH
Q 044126 50 VIKDSDAPIVASFSSRGPNKYVPDILKPDISAPGVNILAAYSPLAPVSRDIEDERHVKYNIISGTSMACPHAAGVAAYVK 129 (333)
Q Consensus 50 ~~~~~~~~~va~fSs~Gp~~~~~~~lKPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~ 129 (333)
|...+..+.++.||++|| +|+|||++|+++++. +.|..++|||||||||||++|||+
T Consensus 204 Vga~~~~~~~~~~S~~g~----------~v~APG~~i~s~~~~-------------~~~~~~sGTS~AaP~vaG~aAll~ 260 (320)
T 2z30_A 204 VGAIDSNDNIASFSNRQP----------EVSAPGVDILSTYPD-------------DSYETLMGTAMATPHVSGVVALIQ 260 (320)
T ss_dssp EEEECTTSCBCTTSCSSC----------SEEEECSSEEEEETT-------------TEEEEECSHHHHHHHHHHHHHHHH
T ss_pred EEeeCCCCCcCcccCCCC----------CEEeCCCCeEEeccC-------------CCeEeccCHHHHHHHHHHHHHHHH
Confidence 334677889999999997 579999999999875 479999999999999999999999
Q ss_pred hhC-------------CCCCHHHHHHHHHhcCCCCCCCCCCCCccccCCCCcCccccCCC
Q 044126 130 SFH-------------PDWSPSAIKSAIMTTAWPMNSSKNTQAEFAYGSGHINPVKAINP 176 (333)
Q Consensus 130 ~~~-------------p~~sp~~ik~~L~~tA~~~~~~~~~~~~~~~G~G~id~~~A~~~ 176 (333)
|++ |.+++.+||++|++||.++... .....+|+|+||+.+|++.
T Consensus 261 ~~~~~~~~~~~~~~~~p~lt~~~v~~~L~~ta~~~~~~---g~~~~~G~G~vd~~~A~~~ 317 (320)
T 2z30_A 261 AAYYQKYGKILPVGTFDDISKNTVRGILHITADDLGPT---GWDADYGYGVVRAALAVQA 317 (320)
T ss_dssp HHHHHHHSSCCCCCCTTCCSTTSHHHHHHHHSBCCSSS---SSBTTTBTCBCCHHHHHHH
T ss_pred HhchhhcccccccccCCCCCHHHHHHHHHhhCccCCCC---CCCCCcCCceeCHHHHHHH
Confidence 998 9999999999999999987542 4577899999999999864
No 24
>2oxa_A Extracellular serine protease; kexin, hydrolase; 1.65A {Aeromonas sobria} PDB: 3hjr_A
Probab=99.78 E-value=3.3e-19 Score=183.47 Aligned_cols=124 Identities=23% Similarity=0.222 Sum_probs=92.9
Q ss_pred eeecCCCCeeecccCCCCCCCCCCCcCCcEEeCCCceeeccCCCCCCC------c---------------Ccccccceee
Q 044126 50 VIKDSDAPIVASFSSRGPNKYVPDILKPDISAPGVNILAAYSPLAPVS------R---------------DIEDERHVKY 108 (333)
Q Consensus 50 ~~~~~~~~~va~fSs~Gp~~~~~~~lKPDI~APG~~I~sa~~~~~~~~------~---------------~~~~~~~~~y 108 (333)
|...+..+.++.||++||.+ ||+|||++|.+..+...... + ...+.....|
T Consensus 258 VgA~~~~g~~a~fS~~G~~v--------dv~APG~~i~~~~p~i~ttd~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~y 329 (600)
T 2oxa_A 258 VSALNADGVRSSYSSVGSNI--------FLSATGGEYGTDTPAMVTTDLPGCDMGYNRTDDPSTNRLHGNSQLDASCDYN 329 (600)
T ss_dssp EEEECTTSSBCTTCCBCTTE--------EEEEECCSCSSSSCCEEEECCSSTTSSSSSTTSCCSSTTTTCTTTCTTCCEE
T ss_pred EecccCCCCcCCcCCCCCCe--------EEEeccCCCCcCCCceEeccccccccccccccccccccccccccccCCcccc
Confidence 33467788999999999987 99999999755433200000 0 0001112458
Q ss_pred EEeCCccchHHHHHHHHHHHHhhCCCCCHHHHHHHHHhcCCCCCCCCC----------------------------CCCc
Q 044126 109 NIISGTSMACPHAAGVAAYVKSFHPDWSPSAIKSAIMTTAWPMNSSKN----------------------------TQAE 160 (333)
Q Consensus 109 ~~~sGTSmAaP~VAG~aALl~~~~p~~sp~~ik~~L~~tA~~~~~~~~----------------------------~~~~ 160 (333)
..++|||||||||||++|||++++|+|++++||++|++||+++..... ....
T Consensus 330 ~~~sGTS~AaP~VAGvaALl~s~~P~lt~~~vk~~L~~tA~~~~~~~~~~~~~~~~~~G~~~~~~~~~~w~~n~~g~~~~ 409 (600)
T 2oxa_A 330 GVMNGTSSATPSTSGAMALLMSAYPDLSVRDLRDLLARSATRVDAKHQPVMVSYTSSTGKVRDVKGLEGWERNAAGMWFS 409 (600)
T ss_dssp EEECSHHHHHHHHHHHHHHHHHHSTTSCHHHHHHHHHHHCBCCSTTCCCEEEEEECTTSCEEEEEEECCSEECTTSCEEB
T ss_pred cccccchHHhHHHHHHHHHHHHhCCCCCHHHHHHHHHHhCccCCcccccccccccccccccccccccccccccCCCcccc
Confidence 999999999999999999999999999999999999999998754310 1134
Q ss_pred cccCCCCcCccccCCCCcccc
Q 044126 161 FAYGSGHINPVKAINPGLVYG 181 (333)
Q Consensus 161 ~~~G~G~id~~~A~~~~lv~d 181 (333)
..||+|+||+.+|++.+..+.
T Consensus 410 ~~~G~G~vda~~Av~~A~~~~ 430 (600)
T 2oxa_A 410 PTYGFGLIDVNKALELAANHQ 430 (600)
T ss_dssp TTTBTCBCCHHHHHHHHTTCC
T ss_pred ccCCCchhhHHHHHHHHHhcc
Confidence 779999999999998655443
No 25
>2id4_A Kexin; KEX2, kexin, furin, proprotein, prohormone, convertase, SUBT like protease, serine protease; HET: NDG; 1.90A {Saccharomyces cerevisiae} SCOP: b.18.1.20 c.41.1.1 PDB: 1r64_A* 1ot5_A*
Probab=99.73 E-value=3.8e-18 Score=172.26 Aligned_cols=109 Identities=19% Similarity=0.166 Sum_probs=92.0
Q ss_pred eeecCCCCeeecccCCCCCCCCCCCcCCcEEe----CCCceeeccCCCCCCCcCcccccceeeEEeCCccchHHHHHHHH
Q 044126 50 VIKDSDAPIVASFSSRGPNKYVPDILKPDISA----PGVNILAAYSPLAPVSRDIEDERHVKYNIISGTSMACPHAAGVA 125 (333)
Q Consensus 50 ~~~~~~~~~va~fSs~Gp~~~~~~~lKPDI~A----PG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~a 125 (333)
|...+..+.++.||++||.. |++| ||.+|+++.... ..|..++|||||||||||++
T Consensus 223 VgA~~~~~~~a~~S~~g~~~--------~~~a~~~gpG~~I~st~~~~------------~~~~~~sGTS~AaP~VAG~a 282 (503)
T 2id4_A 223 IGAIDHKDLHPPYSEGCSAV--------MAVTYSSGSGEYIHSSDING------------RCSNSHGGTSAAAPLAAGVY 282 (503)
T ss_dssp EEEECTTSCCCTTCCCCTTE--------EEEEECSBTTBCEEEECSTT------------CEEEEECSHHHHHHHHHHHH
T ss_pred EEeeCCCCCcCCcCCCCCcc--------eEeecCCCCCCceEeecCCC------------CceecCCCccccchhhhHHH
Confidence 33467788999999999987 8887 899999985432 57999999999999999999
Q ss_pred HHHHhhCCCCCHHHHHHHHHhcCCCCCCC-C--------CCCCccccCCCCcCccccCCCCc
Q 044126 126 AYVKSFHPDWSPSAIKSAIMTTAWPMNSS-K--------NTQAEFAYGSGHINPVKAINPGL 178 (333)
Q Consensus 126 ALl~~~~p~~sp~~ik~~L~~tA~~~~~~-~--------~~~~~~~~G~G~id~~~A~~~~l 178 (333)
|||+|++|++++.|||++|++||+++... . +......||+|+||+.+|++...
T Consensus 283 ALl~~~~p~lt~~~v~~~L~~tA~~~~~~~~~~~~~~~~g~~~~~~~G~G~vda~~Av~~a~ 344 (503)
T 2id4_A 283 TLLLEANPNLTWRDVQYLSILSAVGLEKNADGDWRDSAMGKKYSHRYGFGKIDAHKLIEMSK 344 (503)
T ss_dssp HHHHHHCTTCCHHHHHHHHHHHCBCCTTCGGGCCEECSSSSEEBTTTBTCBCCHHHHHHHHT
T ss_pred HHHHHhCCCCCHHHHHHHHHhccccCCCCcCCCceecCCCCccCcccCCcEecHHHHHHHHh
Confidence 99999999999999999999999987653 1 12245689999999999998544
No 26
>1p8j_A Furin precursor; prohormone convertase, SPC1, PACE, P-domain; HET: DKA AR7 NAG FUL BMA MAN GAL FUC; 2.60A {Mus musculus} SCOP: b.18.1.20 c.41.1.1
Probab=99.72 E-value=2.8e-18 Score=171.83 Aligned_cols=115 Identities=14% Similarity=0.133 Sum_probs=92.1
Q ss_pred eeecCCCCeeecccCCCCCCCCCCCcCCcEEeCCCceeeccCCCCCCCcCcccccceeeEEeCCccchHHHHHHHHHHHH
Q 044126 50 VIKDSDAPIVASFSSRGPNKYVPDILKPDISAPGVNILAAYSPLAPVSRDIEDERHVKYNIISGTSMACPHAAGVAAYVK 129 (333)
Q Consensus 50 ~~~~~~~~~va~fSs~Gp~~~~~~~lKPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~ 129 (333)
|...+..+.++.||++||.. ....+|+..+||.+|+++.... ..|..++|||||||||||++|||+
T Consensus 210 VgA~~~~g~~a~~S~~g~~~--~~~~~~~~~~~g~~i~st~~~~------------~~~~~~sGTS~AaP~VAG~aALl~ 275 (471)
T 1p8j_A 210 ISSATQFGNVPWYSEACSST--LATTYSSGNQNEKQIVTTDLRQ------------KCTESHTGTSASAPLAAGIIALTL 275 (471)
T ss_dssp EEEECTTSCCCTTCCBCTTC--CEEEECCCSTTSCCEEEEETTT------------EEEEEECSHHHHHHHHHHHHHHHH
T ss_pred EecccCCCCcccccCCCCcc--eEEeCCCCCCCCCCEEEeeCCC------------CccccCCCcccccchhhhHHHHHH
Confidence 33466788999999999986 3333444445567899887642 468999999999999999999999
Q ss_pred hhCCCCCHHHHHHHHHhcCCCCCCCC--------CCCCccccCCCCcCccccCCCCc
Q 044126 130 SFHPDWSPSAIKSAIMTTAWPMNSSK--------NTQAEFAYGSGHINPVKAINPGL 178 (333)
Q Consensus 130 ~~~p~~sp~~ik~~L~~tA~~~~~~~--------~~~~~~~~G~G~id~~~A~~~~l 178 (333)
|++|+|++++||++|++||+++.... +......||+|+||+.+|++...
T Consensus 276 ~~~p~lt~~~v~~~L~~tA~~~~~~~~~~~~n~~g~~~~~~~G~G~vda~~Av~~a~ 332 (471)
T 1p8j_A 276 EANKNLTWRDMQHLVVQTSKPAHLNADDWATNGVGRKVSHSYGYGLLDAGAMVALAQ 332 (471)
T ss_dssp HHCTTCCHHHHHHHHHHHCBCTTCCCSCCEECTTSCEEBTTTBTCBCCHHHHHHHHH
T ss_pred hhCCCCCHHHHHHHHHhcCccCCCCCCCceecCCCcccCCCCCCEEEcHhHHHHHhh
Confidence 99999999999999999999876431 11245789999999999998544
No 27
>1sh7_A Extracellular subtilisin-like serine proteinase; cold adaptation, psychrotrophic, subtilisin-like proteinase, depentent, hydrolase; HET: PMS; 1.84A {Vibrio SP} PDB: 1s2n_A*
Probab=99.70 E-value=2.2e-17 Score=155.14 Aligned_cols=83 Identities=34% Similarity=0.398 Sum_probs=74.6
Q ss_pred eeecCCCCeeecccCCCCCCCCCCCcCCcEEeCCCceeeccCCCCCCCcCcccccceeeEEeCCccchHHHHHHHHHHHH
Q 044126 50 VIKDSDAPIVASFSSRGPNKYVPDILKPDISAPGVNILAAYSPLAPVSRDIEDERHVKYNIISGTSMACPHAAGVAAYVK 129 (333)
Q Consensus 50 ~~~~~~~~~va~fSs~Gp~~~~~~~lKPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~ 129 (333)
|...+..+.++.||++||.+ ||+|||++|+++++. +.|..++|||||||||||++|||+
T Consensus 176 Vga~~~~~~~~~~S~~G~~~--------di~ApG~~i~s~~~~-------------~~~~~~sGTS~AaP~vaG~aAll~ 234 (284)
T 1sh7_A 176 VGSTTSSDSRSSFSNWGSCV--------DLFAPGSQIKSAWYD-------------GGYKTISGTSMATPHVAGVAALYL 234 (284)
T ss_dssp EEEECTTSBBCTTCCBSTTC--------CEEEECSSEEEECTT-------------SSEEEECSHHHHHHHHHHHHHHHH
T ss_pred EEEecCCCCcCcccCCCCcc--------EEEeccCCeEEecCC-------------CCEEEccChHHHHHHHHHHHHHHH
Confidence 33467788999999999975 999999999998765 368999999999999999999999
Q ss_pred hhCCCCCHHHHHHHHHhcCCCCCC
Q 044126 130 SFHPDWSPSAIKSAIMTTAWPMNS 153 (333)
Q Consensus 130 ~~~p~~sp~~ik~~L~~tA~~~~~ 153 (333)
+++|+++++|||++|+++|.+...
T Consensus 235 ~~~p~lt~~~v~~~L~~tA~~~~~ 258 (284)
T 1sh7_A 235 QENNGLTPLQLTGLLNSRASENKV 258 (284)
T ss_dssp HHCTTCCHHHHHHHHHHHSEESCC
T ss_pred HHCCCCCHHHHHHHHHhhCccCCc
Confidence 999999999999999999987543
No 28
>3hjr_A Extracellular serine protease; kexin, hydrolase; 1.65A {Aeromonas sobria}
Probab=99.69 E-value=4.1e-17 Score=167.44 Aligned_cols=119 Identities=23% Similarity=0.212 Sum_probs=88.1
Q ss_pred ecCCCCeeecccCCCCCCCCCCCcCCcEEeCCCceee-------c-cCCCCCCC-------------cCcccccceeeEE
Q 044126 52 KDSDAPIVASFSSRGPNKYVPDILKPDISAPGVNILA-------A-YSPLAPVS-------------RDIEDERHVKYNI 110 (333)
Q Consensus 52 ~~~~~~~va~fSs~Gp~~~~~~~lKPDI~APG~~I~s-------a-~~~~~~~~-------------~~~~~~~~~~y~~ 110 (333)
..+..+.++.||++|+.+ +++|||.++.. . .+...... ..........|..
T Consensus 260 A~~~~g~~a~yS~~G~~v--------~~~apg~~~~~~~~~~vt~~~pG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (600)
T 3hjr_A 260 ALNADGVRSSYSSVGSNI--------FLSATGGEYGTDTPAMVTTDLPGCDMGYNRTDDPSTNRLHGNSQLDASCDYNGV 331 (600)
T ss_dssp EECTTSSBCTTCCBCTTC--------CEEEECCSCSSSSCCEEEECCSSTTSSSSSTTSCCSSTTTTCTTTCTTCCEEEE
T ss_pred eecCCCCEeecccCCcce--------eeccCCCCCCCCCcceeeecCCCccccccccCCccccccccccccCCCCCceec
Confidence 367788999999999987 89999976422 1 11110000 0001122356899
Q ss_pred eCCccchHHHHHHHHHHHHhhCCCCCHHHHHHHHHhcCCCCCCCCC----------------------------CCCccc
Q 044126 111 ISGTSMACPHAAGVAAYVKSFHPDWSPSAIKSAIMTTAWPMNSSKN----------------------------TQAEFA 162 (333)
Q Consensus 111 ~sGTSmAaP~VAG~aALl~~~~p~~sp~~ik~~L~~tA~~~~~~~~----------------------------~~~~~~ 162 (333)
++|||||||||||++|||+|++|+|+++|||++|++||+++..... ......
T Consensus 332 ~sGTSmAaP~VAGvaALll~a~P~lt~~~v~~~L~~TA~~~d~~~~p~~~~~~~~~~~~~~~~~~~~w~~N~aG~~~s~~ 411 (600)
T 3hjr_A 332 MNGTSSATPSTSGAMALLMSAYPDLSVRDLRDLLARSATRVDAKHQPVMVSYTSSTGKVRDVKGLEGWERNAAGMWFSPT 411 (600)
T ss_dssp ECSHHHHHHHHHHHHHHHHHHSTTSCHHHHHHHHHHHCBCCSTTCCCEEEEEECTTSCEEEEEEECCSEECTTSCEEBTT
T ss_pred cccccccchhHHHHHHHHHHHCCCCCHHHHHHHHHhhCccCCCCCCcccccccccccccccccccCCcccccCCceEccc
Confidence 9999999999999999999999999999999999999998754321 112456
Q ss_pred cCCCCcCccccCCCCc
Q 044126 163 YGSGHINPVKAINPGL 178 (333)
Q Consensus 163 ~G~G~id~~~A~~~~l 178 (333)
||+|+||+.+|++.+.
T Consensus 412 yGfG~vDA~~aV~~A~ 427 (600)
T 3hjr_A 412 YGFGLIDVNKALELAA 427 (600)
T ss_dssp TBTCBCCHHHHHHHHT
T ss_pred cCCceecHHHHHHHhh
Confidence 9999999999987543
No 29
>2pwa_A Proteinase K; structure, alanine boronic acid, hydrolase; 0.83A {Engyodontium album} SCOP: c.41.1.1 PDB: 1p7v_A 1p7w_A 2dqk_A 2duj_A 2g4v_A 2hd4_A 2hpz_A 2id8_A 2pq2_A 1ic6_A 2pwb_A* 2pyz_A* 2v8b_A 3aj8_A 3aj9_A 3dyb_A* 3gt3_A* 3gt4_A* 3l1k_A 3osz_A ...
Probab=99.69 E-value=2.4e-17 Score=154.51 Aligned_cols=93 Identities=32% Similarity=0.345 Sum_probs=80.6
Q ss_pred eeecCCCCeeecccCCCCCCCCCCCcCCcEEeCCCceeeccCCCCCCCcCcccccceeeEEeCCccchHHHHHHHHHHHH
Q 044126 50 VIKDSDAPIVASFSSRGPNKYVPDILKPDISAPGVNILAAYSPLAPVSRDIEDERHVKYNIISGTSMACPHAAGVAAYVK 129 (333)
Q Consensus 50 ~~~~~~~~~va~fSs~Gp~~~~~~~lKPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~ 129 (333)
|...+..+.++.||++||.+ ||+|||++|+++++. +.|..++|||||||||||++|||+
T Consensus 180 Vga~~~~~~~~~~S~~G~~~--------di~APG~~i~s~~~~-------------~~~~~~sGTS~AaP~VaG~aAll~ 238 (279)
T 2pwa_A 180 VGASDRYDRRSSFSNYGSVL--------DIFGPGTDILSTWIG-------------GSTRSISGTSMATPHVAGLAAYLM 238 (279)
T ss_dssp EEEECTTSBBCTTCCBSTTC--------CEEEECSSEEEEETT-------------TEEEEECSHHHHHHHHHHHHHHHH
T ss_pred EEEecCCCCcCCcCCCCCcc--------eEEEecCCeEEeecC-------------CCEEEcCChHHHHHHHHHHHHHHH
Confidence 33467789999999999965 999999999999876 378999999999999999999999
Q ss_pred hhCCCCCHHHHHHHHHhcCCCCCCCCCCCCccccCCCCcCcc
Q 044126 130 SFHPDWSPSAIKSAIMTTAWPMNSSKNTQAEFAYGSGHINPV 171 (333)
Q Consensus 130 ~~~p~~sp~~ik~~L~~tA~~~~~~~~~~~~~~~G~G~id~~ 171 (333)
++ |.+++.|||++|++||++... ..+|+|..|+.
T Consensus 239 ~~-p~lt~~~v~~~L~~tA~~~~~-------~~~~~g~~n~l 272 (279)
T 2pwa_A 239 TL-GKTTAASACRYIADTANKGDL-------SNIPFGTVNLL 272 (279)
T ss_dssp HT-TSCCTTTHHHHHHHHSEESCC-------BSCCTTSCCEE
T ss_pred hC-CCCCHHHHHHHHHHhCccccc-------CCCCCCCccEe
Confidence 99 999999999999999987532 23677877763
No 30
>4dzt_A Aqualysin-1, aqualysin-I; serine protease, calcium binding, inhibitor, hydrolase-hydro inhibitor complex; HET: PMS; 1.95A {Thermus aquaticus}
Probab=99.68 E-value=5.3e-17 Score=151.43 Aligned_cols=85 Identities=35% Similarity=0.437 Sum_probs=75.7
Q ss_pred eeecCCCCeeecccCCCCCCCCCCCcCCcEEeCCCceeeccCCCCCCCcCcccccceeeEEeCCccchHHHHHHHHHHHH
Q 044126 50 VIKDSDAPIVASFSSRGPNKYVPDILKPDISAPGVNILAAYSPLAPVSRDIEDERHVKYNIISGTSMACPHAAGVAAYVK 129 (333)
Q Consensus 50 ~~~~~~~~~va~fSs~Gp~~~~~~~lKPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~ 129 (333)
|...+..+.++.||++||.+ ||+|||++|.+++... ...|..++|||||||||||++|||+
T Consensus 176 Vga~~~~~~~~~~S~~g~~~--------dv~ApG~~i~s~~~~~-----------~~~~~~~sGTS~AaP~vaG~aAll~ 236 (276)
T 4dzt_A 176 VGATTSSDARASFSNYGSCV--------DLFAPGASIPSAWYTS-----------DTATQTLNGTSMATPHVAGVAALYL 236 (276)
T ss_dssp EEEECTTSBBCTTCCBSTTC--------CEEEECSSEEEECTTS-----------SSCEEEECSHHHHHHHHHHHHHHHH
T ss_pred EEEECCCCCcCCcCCCCCCc--------eEEeCCCCeEccccCC-----------CCceEEeeEHHHHHHHHHHHHHHHH
Confidence 33467789999999999976 9999999999998753 1468999999999999999999999
Q ss_pred hhCCCCCHHHHHHHHHhcCCCCCC
Q 044126 130 SFHPDWSPSAIKSAIMTTAWPMNS 153 (333)
Q Consensus 130 ~~~p~~sp~~ik~~L~~tA~~~~~ 153 (333)
+++|+++++|||++|+++|.+...
T Consensus 237 ~~~p~lt~~~v~~~L~~tA~~~~~ 260 (276)
T 4dzt_A 237 EQNPSATPASVASAILNGATTGRL 260 (276)
T ss_dssp HHCTTCCHHHHHHHHHHHSEESCC
T ss_pred HHCCCCCHHHHHHHHHhhCcCCcc
Confidence 999999999999999999987643
No 31
>2b6n_A Proteinase K; S binding, substrate specificity, proteinase K, subtilase, psychrotrophic, psychrophilic, hydrolase; 1.80A {Serratia SP}
Probab=99.68 E-value=6e-17 Score=151.50 Aligned_cols=84 Identities=37% Similarity=0.451 Sum_probs=73.8
Q ss_pred eeecCCCCeeecccCCCCCCCCCCCcCCcEEeCCCceeeccCCCCCCCcCcccccceeeEEeCCccchHHHHHHHHHHHH
Q 044126 50 VIKDSDAPIVASFSSRGPNKYVPDILKPDISAPGVNILAAYSPLAPVSRDIEDERHVKYNIISGTSMACPHAAGVAAYVK 129 (333)
Q Consensus 50 ~~~~~~~~~va~fSs~Gp~~~~~~~lKPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~ 129 (333)
|...+..+.++.||++||.+ ||+|||++|++++... .+.|..++|||||||||||++|||+
T Consensus 178 Vga~~~~~~~~~~S~~G~~~--------di~ApG~~i~s~~~~~-----------~~~~~~~sGTS~AaP~vaG~aAll~ 238 (278)
T 2b6n_A 178 VGSTTSNDSRSSFSNYGTCL--------DIYAPGSSITSSWYTS-----------NSATNTISGTSMASPHVAGVAALYL 238 (278)
T ss_dssp EEEECTTSBBCTTCCBSTTC--------CEEEECSSEEEECTTS-----------TTCEEEECSHHHHHHHHHHHHHHHH
T ss_pred EEeeCCCCCcCCcCCCCCCC--------eEEeCCCCeECcccCC-----------CCCEEEeCcHHHHHHHHHHHHHHHH
Confidence 33467788999999999864 9999999999988652 1468999999999999999999999
Q ss_pred hhCCCCCHHHHHHHHHhcCCCCC
Q 044126 130 SFHPDWSPSAIKSAIMTTAWPMN 152 (333)
Q Consensus 130 ~~~p~~sp~~ik~~L~~tA~~~~ 152 (333)
+++|++++.|||++|++||.+..
T Consensus 239 ~~~p~lt~~~v~~~L~~tA~~~~ 261 (278)
T 2b6n_A 239 DENPNLSPAQVTNLLKTRATADK 261 (278)
T ss_dssp HHCTTCCHHHHHHHHHHHSEESC
T ss_pred HhCCCCCHHHHHHHHHHhCccCC
Confidence 99999999999999999997643
No 32
>3f7m_A Alkaline serine protease VER112; verticillium psalliotae, cuticle- degrading protease, nematodes, hydrolase, secreted, zymogen; 1.60A {Lecanicillium psalliotae} SCOP: c.41.1.1 PDB: 3f7o_A
Probab=99.62 E-value=2.1e-16 Score=147.56 Aligned_cols=80 Identities=36% Similarity=0.439 Sum_probs=72.3
Q ss_pred eeecCCCCeeecccCCCCCCCCCCCcCCcEEeCCCceeeccCCCCCCCcCcccccceeeEEeCCccchHHHHHHHHHHHH
Q 044126 50 VIKDSDAPIVASFSSRGPNKYVPDILKPDISAPGVNILAAYSPLAPVSRDIEDERHVKYNIISGTSMACPHAAGVAAYVK 129 (333)
Q Consensus 50 ~~~~~~~~~va~fSs~Gp~~~~~~~lKPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~ 129 (333)
|...+..+.++.||++||.+ ||+|||++|+++++. +.|..++|||||||||||++|||+
T Consensus 181 Vga~~~~~~~~~~S~~g~~~--------di~ApG~~i~s~~~~-------------~~~~~~sGTS~AaP~vaG~aAll~ 239 (279)
T 3f7m_A 181 VGATDSNDVRSTFSNYGRVV--------DIFAPGTSITSTWIG-------------GRTNTISGTSMATPHIAGLAAYLF 239 (279)
T ss_dssp EEEECTTSBBCTTCCBSTTC--------CEEEECSSEEEECGG-------------GCEEEECSHHHHHHHHHHHHHHHH
T ss_pred EeecCCCCCCCCCCCCCCCC--------eEEECCCCeEeecCC-------------CCEEEeeEHHHHHHHHHHHHHHHH
Confidence 33467789999999999965 999999999999875 468999999999999999999999
Q ss_pred hhCCCCCHHHHHHHHHhcCCCC
Q 044126 130 SFHPDWSPSAIKSAIMTTAWPM 151 (333)
Q Consensus 130 ~~~p~~sp~~ik~~L~~tA~~~ 151 (333)
+++|. ++.+||++|+++|.+.
T Consensus 240 ~~~p~-t~~~v~~~L~~tA~~~ 260 (279)
T 3f7m_A 240 GLEGG-SAGAMCGRIQTLSTKN 260 (279)
T ss_dssp HHTCC-CTTTHHHHHHHHSEES
T ss_pred HhCCC-CHHHHHHHHHHhcccc
Confidence 99999 9999999999999764
No 33
>2qtw_B Proprotein convertase subtilisin/kexin type 9; coronary heart disease, hypercholest low density lipoprotein receptor, autocatalytic cleavage; HET: NAG; 1.90A {Homo sapiens} PDB: 3m0c_B 3bps_A 3gcw_A 3gcx_A 3p5b_A 3p5c_A 2pmw_B 3h42_B 2w2n_A 2w2m_A 2w2p_A 2w2q_A 2xtj_A 2w2o_A
Probab=99.61 E-value=1e-15 Score=155.18 Aligned_cols=80 Identities=25% Similarity=0.306 Sum_probs=69.6
Q ss_pred ecCCCCeeec----ccCCCCCCCCCCCcCCcEEeCCCceeeccCCCCCCCcCcccccceeeEEeCCccchHHHHHHHHHH
Q 044126 52 KDSDAPIVAS----FSSRGPNKYVPDILKPDISAPGVNILAAYSPLAPVSRDIEDERHVKYNIISGTSMACPHAAGVAAY 127 (333)
Q Consensus 52 ~~~~~~~va~----fSs~Gp~~~~~~~lKPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aAL 127 (333)
..+..+.++. ||++|+. |||+|||++|+++++... ..|..++|||||||||||++||
T Consensus 186 A~d~~g~~a~~s~~fSn~G~~--------vDI~APG~~I~St~~~~~-----------~~y~~~SGTSmAAP~VAG~aAL 246 (546)
T 2qtw_B 186 ATNAQDQPVTLGTLGTNFGRC--------VDLFAPGEDIIGASSDCS-----------TCFVSQSGTSQAAAHVAGIAAM 246 (546)
T ss_dssp EECTTSCBCEETTEECCBSTT--------CCEEEECSSEEEECTTST-----------TCEEEECSHHHHHHHHHHHHHH
T ss_pred EecCCCCcccccCCcCCCCCc--------ceEEecCccEEeeccCCC-----------CcEeeeCcCcHHHHHHHHHHHH
Confidence 3556667776 8999974 499999999999987531 4689999999999999999999
Q ss_pred HHhhCCCCCHHHHHHHHHhcCCC
Q 044126 128 VKSFHPDWSPSAIKSAIMTTAWP 150 (333)
Q Consensus 128 l~~~~p~~sp~~ik~~L~~tA~~ 150 (333)
|++++|++++.|||++|+++|.+
T Consensus 247 lls~~P~ltp~qVr~~L~~tAt~ 269 (546)
T 2qtw_B 247 MLSAEPELTLAELRQRLIHFSAK 269 (546)
T ss_dssp HHHHSTTCCHHHHHHHHHHTSEE
T ss_pred HHHHCCCCCHHHHHHHHHHhccc
Confidence 99999999999999999999954
No 34
>2p4e_P Proprotein convertase subtilisin/kexin type 9; protease, LDL receptor, LDL, endocytosis, hydrol; 1.98A {Homo sapiens}
Probab=99.59 E-value=9.3e-17 Score=166.74 Aligned_cols=79 Identities=25% Similarity=0.307 Sum_probs=0.0
Q ss_pred cCCCCeeec----ccCCCCCCCCCCCcCCcEEeCCCceeeccCCCCCCCcCcccccceeeEEeCCccchHHHHHHHHHHH
Q 044126 53 DSDAPIVAS----FSSRGPNKYVPDILKPDISAPGVNILAAYSPLAPVSRDIEDERHVKYNIISGTSMACPHAAGVAAYV 128 (333)
Q Consensus 53 ~~~~~~va~----fSs~Gp~~~~~~~lKPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl 128 (333)
.+..+.++. ||++||. |||+|||++|+++++.. ...|..++|||||||||||++|||
T Consensus 339 ~d~~~~~a~~ss~fSn~G~~--------vDI~APG~~I~St~~~~-----------~~~y~~~SGTSmAAPhVAG~aALl 399 (692)
T 2p4e_P 339 TNAQDQPVTLGTLGTNFGRC--------VDLFAPGEDIIGASSDC-----------STCFVSQSGTSQAAAHVAGIAAMM 399 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EcCCCCccccccccCCCCCc--------eeEEecCCcEEeeccCC-----------CCceEeccchHHHHHHHHHHHHHH
Confidence 445556666 8999974 59999999999998753 146899999999999999999999
Q ss_pred HhhCCCCCHHHHHHHHHhcCCC
Q 044126 129 KSFHPDWSPSAIKSAIMTTAWP 150 (333)
Q Consensus 129 ~~~~p~~sp~~ik~~L~~tA~~ 150 (333)
++++|+|+++|||++|+++|.+
T Consensus 400 ls~~P~ltp~qVk~~L~~tA~~ 421 (692)
T 2p4e_P 400 LSAEPELTLAELRQRLIHFSAK 421 (692)
T ss_dssp ----------------------
T ss_pred HHHCCCCCHHHHHHHHHHhccc
Confidence 9999999999999999999964
No 35
>1ga6_A Serine-carboxyl proteinase; serine-carboxyl proteinase, hydrolase-hydrolase inhibitor CO; 1.00A {Pseudomonas SP} SCOP: c.41.1.2 PDB: 1ga4_A* 1ga1_A 1kdv_A* 1kdy_A* 1kdz_A* 1ke1_A* 1ke2_A* 1nlu_A*
Probab=98.76 E-value=2.4e-09 Score=104.17 Aligned_cols=101 Identities=25% Similarity=0.240 Sum_probs=68.1
Q ss_pred cccCCCCCCC--------CCCCcCCcEE---eCCCceeeccCCCCCCCcCcccccceeeEEeCCccchHHHHHHHHHHHH
Q 044126 61 SFSSRGPNKY--------VPDILKPDIS---APGVNILAAYSPLAPVSRDIEDERHVKYNIISGTSMACPHAAGVAAYVK 129 (333)
Q Consensus 61 ~fSs~Gp~~~--------~~~~lKPDI~---APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~ 129 (333)
.||+++|... ..++.+|||+ |||.++.... . +.|..++|||||||||||++|||+
T Consensus 236 GfS~~~~~P~yQ~~~~~~~~gR~~PDVsa~aapg~~~~~~~-~-------------g~~~~~~GTS~AaP~vAGi~ALl~ 301 (372)
T 1ga6_A 236 GYSVYESKPSWQSVVSGTPGRRLLPDISFDAAQGTGALIYN-Y-------------GQLQQIGGTSLASPIFVGLWARLQ 301 (372)
T ss_dssp EEEEEEECCGGGGGSTTSCSEEEECSEEEECCGGGCEEEEE-T-------------TEEEEECSHHHHHHHHHHHHHHHH
T ss_pred CcCCCCCCcccccccccCCCCccCCceecccCCCCCEEEEe-C-------------CcEEeccccchHHHHHHHHHHHHH
Confidence 4777665421 1357789999 9999987654 2 468899999999999999999999
Q ss_pred hhCCC----CCHHHHHHHHHh-cC-CCCCCC---------C-CCCCccccCCCCcCccccCC
Q 044126 130 SFHPD----WSPSAIKSAIMT-TA-WPMNSS---------K-NTQAEFAYGSGHINPVKAIN 175 (333)
Q Consensus 130 ~~~p~----~sp~~ik~~L~~-tA-~~~~~~---------~-~~~~~~~~G~G~id~~~A~~ 175 (333)
|+++. ++|...+.+-.. .+ +++... . .++++...|+|.+|..++++
T Consensus 302 ~~~~~~lG~~np~LY~~a~~~~~~f~Dit~G~n~~~~~g~~a~~GwD~~TGlGtpn~~~l~~ 363 (372)
T 1ga6_A 302 SANSNSLGFPAASFYSAISSTPSLVHDVKSGNNGYGGYGYNAGTGWDYPTGWGSLDIAKLSA 363 (372)
T ss_dssp HHTTTCCCCCHHHHHHHHHHCGGGEECCCSCBSSSTTCSCBCCSSSBTTTBTCEECHHHHHH
T ss_pred hcCCCCcCccCHHHHhhcccCCcceeecccCCCCCCCCCCCCCCCCCCCccCchhhHHHHHH
Confidence 98753 445444322111 11 222210 0 15678889999999988765
No 36
>1t1e_A Kumamolisin; proenzyme, prosubtilase, activation mechanism, sedolisin, serine-carboxyl proteinase, hydrolase; 1.18A {Bacillus SP} SCOP: c.41.1.2 d.58.3.2 PDB: 1t1g_A 1t1i_A 1gt9_1 1gtg_1 1gtj_1* 1gtl_1* 1sio_A* 1sn7_A 1zvj_A 1siu_A 1zvk_A
Probab=98.64 E-value=1.2e-08 Score=104.07 Aligned_cols=88 Identities=13% Similarity=0.134 Sum_probs=58.7
Q ss_pred CCCcCCcEEeCC---CceeeccCCCCCCCcCcccccceeeEEeCCccchHHHHHHHHHHHHhhCCC----CCHHHHHHHH
Q 044126 72 PDILKPDISAPG---VNILAAYSPLAPVSRDIEDERHVKYNIISGTSMACPHAAGVAAYVKSFHPD----WSPSAIKSAI 144 (333)
Q Consensus 72 ~~~lKPDI~APG---~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~p~----~sp~~ik~~L 144 (333)
.++.+|||+||| .++. .+.. +.|..++|||||||||||++|||.++++. ++|...+ +
T Consensus 434 ~gR~~PDVsA~a~p~~~~~-v~~~-------------g~~~~~~GTS~AaP~vAGv~ALl~~~~g~~lG~~np~LY~-~- 497 (552)
T 1t1e_A 434 SGRGVPDVAGNADPATGYE-VVID-------------GETTVIGGTAAVAPLFAALVARINQKLGKPVGYLNPTLYQ-L- 497 (552)
T ss_dssp CCCEECSEEEECCGGGCEE-EEET-------------TEEEEEESGGGHHHHHHHHHHHHHHHHTSCCCCCHHHHTT-S-
T ss_pred CCCCCCceecccCCCCCeE-EEeC-------------CeEEeccccchhhHHHHHHHHHHhhhccCCCCCccHHHHh-c-
Confidence 468899999995 3433 2222 47899999999999999999999998542 3333221 1
Q ss_pred HhcC-CCCCC-----------CC-CCCCccccCCCCcCccccCC
Q 044126 145 MTTA-WPMNS-----------SK-NTQAEFAYGSGHINPVKAIN 175 (333)
Q Consensus 145 ~~tA-~~~~~-----------~~-~~~~~~~~G~G~id~~~A~~ 175 (333)
...+ +++.. .. .++++...|+|.+|..++++
T Consensus 498 ~~~~f~Dit~G~n~~~~~~~~~~a~~GwD~~TGlGtpn~~~l~~ 541 (552)
T 1t1e_A 498 PPEVFHDITEGNNDIANRARIYQAGPGWDPCTGLGSPIGIRLLQ 541 (552)
T ss_dssp CGGGEECCCSCBCCCSSSSCCSBCCSSCBTTTBTCEECHHHHHH
T ss_pred CccceeecccCCCCCcCCCCCcCCCCCCCCCccccccCHHHHHH
Confidence 0001 11211 01 15678889999999988776
No 37
>2ys4_A Hydrocephalus-inducing protein homolog; hydin, PAPD-like, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.07 E-value=0.0018 Score=52.50 Aligned_cols=77 Identities=16% Similarity=0.164 Sum_probs=59.4
Q ss_pred eeEEEEEEEEeccCCCeeEEEEEecCCceEEEEEcCeEEEeeCCcEEEEEEEEEeecCCCCCeEEEEEEEE-cCCceEEe
Q 044126 238 FTIKFPRTVTNIGLPNSTYKAGILQNSKISVNVVPEVLSFRSLNEKKSFIVTVTGKGLASGSIVSAALVWF-DGSRIVRS 316 (333)
Q Consensus 238 ~~~t~~rtvtNvg~~~~tY~~~v~~~~g~~v~v~P~~l~~~~~g~~~~~~Vt~~~~~~~~~~~~~G~i~~~-~~~~~vr~ 316 (333)
...+.+.+++|+|+.+..|+.....| .+++|....+ ++|++..++|+|.+.. ...+.+.|.+. +++..+.+
T Consensus 41 ~~~~~~~~l~N~g~~~~~f~~~~~~~----F~i~P~~g~L-~pg~~~~i~V~F~P~~---~g~~~~~l~v~~~~g~~~~v 112 (122)
T 2ys4_A 41 YSTQKILLVRNIGNKNAVFHIKTCRP----FSIEPAIGTL-NVGESMQLEVEFEPQS---VGDHSGRLIVCYDTGEKVFV 112 (122)
T ss_dssp SCEEEEEEEECCSSSCEEEEEECCTT----EEEESSEEEE-CTTCEEEEEEEECCSS---SBCCCCBCEEEESSSCEECC
T ss_pred CeEEEEEEEEECCCCCEEEEEecCCC----eEEECCcCEE-CCCCEEEEEEEEEcCC---CccEEEEEEEEECCCCEEEE
Confidence 56778889999999988898776443 6679999999 8999999999999975 34567777664 66667777
Q ss_pred eEEEEe
Q 044126 317 PIVVHS 322 (333)
Q Consensus 317 P~~v~~ 322 (333)
++....
T Consensus 113 ~L~G~~ 118 (122)
T 2ys4_A 113 SLYGAA 118 (122)
T ss_dssp EECCCE
T ss_pred EEEEEE
Confidence 665443
No 38
>3edy_A Tripeptidyl-peptidase 1; protease, TPP1, sedolisin, batten disease, lincl, zymogen, P exopeptidase, endopeptidase, S53 family, CLN2; HET: NAG; 1.85A {Homo sapiens} PDB: 3ee6_A*
Probab=96.10 E-value=0.0031 Score=64.02 Aligned_cols=47 Identities=21% Similarity=0.282 Sum_probs=36.2
Q ss_pred CCCcCCcEEeCCCceeeccCCCCCCCcCcccccceeeEEeCCccchHHHHHHHHHHHHhh
Q 044126 72 PDILKPDISAPGVNILAAYSPLAPVSRDIEDERHVKYNIISGTSMACPHAAGVAAYVKSF 131 (333)
Q Consensus 72 ~~~lKPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~ 131 (333)
.++-.|||+|.|.++.....+ ..+....|||+|||++||++|||.++
T Consensus 426 ~gR~~PDVaa~~~~~~v~~~g-------------~~~~~~gGTS~aaP~~A~~~al~n~~ 472 (544)
T 3edy_A 426 SGRAYPDVAALSDGYWVVSNR-------------VPIPWVSGTSASTPVFGGILSLINEH 472 (544)
T ss_dssp TEEEECSEEEECSSEEEEETT-------------EEEEEECSHHHHHHHHHHHHHHHHHH
T ss_pred CCCcCCCeecccCCEEEEECC-------------eeeeeecCcccchhHHHHHHHHHHHH
Confidence 357789999999886543211 22345899999999999999999886
No 39
>2e6j_A Hydin protein; PAPD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=92.05 E-value=0.61 Score=36.18 Aligned_cols=67 Identities=4% Similarity=-0.056 Sum_probs=48.6
Q ss_pred eeEEEEEEEEeccCCCeeEEEEEec-CCceEEEEEcCeEEEeeCCcEEEEEEEEEeecCCCCCeEEEEEEEE
Q 044126 238 FTIKFPRTVTNIGLPNSTYKAGILQ-NSKISVNVVPEVLSFRSLNEKKSFIVTVTGKGLASGSIVSAALVWF 308 (333)
Q Consensus 238 ~~~t~~rtvtNvg~~~~tY~~~v~~-~~g~~v~v~P~~l~~~~~g~~~~~~Vt~~~~~~~~~~~~~G~i~~~ 308 (333)
...+.+.+++|.|+.+..|+..... ..+...+++|..=.+ .+|++.+++|+|.+.. . ..+.-.|.+.
T Consensus 26 ~~~~~~~~l~N~g~~p~~~~~~~~~~~~~~~f~v~p~~g~i-~pg~~~~i~V~f~~~~-~--g~f~~~i~v~ 93 (112)
T 2e6j_A 26 SAHCYEAILYNKGSIDALFNMTPPTSALGACFVFSPKEGII-EPSGVQAIQISFSSII-L--GNFEEEFLVN 93 (112)
T ss_dssp CCEEEEEEEEECCSSCEEEEECCCSSHHHHHCEEESSEEEE-CTTBCCEEEEEECCCC-C--EEEEEEECEE
T ss_pred CEEEEEEEEEECCcceEEEEEecCCccccCcEEEECCcCEE-CCCCEEEEEEEEECCC-c--ceEEEEEEEE
Confidence 3566778899999999999984311 112346678999888 8899999999999965 2 3344456664
No 40
>2r39_A FIXG-related protein; structural GE PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, iron, iron-sulfur; 2.02A {Vibrio parahaemolyticus}
Probab=91.84 E-value=0.82 Score=36.39 Aligned_cols=55 Identities=9% Similarity=0.061 Sum_probs=45.9
Q ss_pred eeEEEEEEEEeccCCCeeEEEEEecCCceEEEEEcCeEEEeeCCcEEEEEEEEEeec
Q 044126 238 FTIKFPRTVTNIGLPNSTYKAGILQNSKISVNVVPEVLSFRSLNEKKSFIVTVTGKG 294 (333)
Q Consensus 238 ~~~t~~rtvtNvg~~~~tY~~~v~~~~g~~v~v~P~~l~~~~~g~~~~~~Vt~~~~~ 294 (333)
-.-..+..+.|....+.+|+++++..+|+++. .|..+.+ ++|+.+++.|.+.++.
T Consensus 31 I~N~Ytlki~Nkt~~~~~~~l~v~g~~~l~~~-g~~~i~v-~~g~~~~~~v~v~~~~ 85 (118)
T 2r39_A 31 VENTYTLKVINKTQQVQEYNLDVKGLNDVSWY-GKQTIQV-EPGEVLNLPMSLGADP 85 (118)
T ss_dssp EEEEEEEEEEECSSSCEEEEEEEESCSSCEEE-SCCEEEE-CTTCEEEEEEEEEECG
T ss_pred EEEEEEEEEEECCCCCEEEEEEEeCCcccEEe-CCCcEEE-CCCCEEEEEEEEEECh
Confidence 45667889999999999999999987776653 2566888 8999999999999876
No 41
>2qsv_A Uncharacterized protein; MCSG, structural genomics, porphyromonas gingivalis W83, PSI protein structure initiative; 2.10A {Porphyromonas gingivalis}
Probab=91.76 E-value=1 Score=39.76 Aligned_cols=80 Identities=10% Similarity=0.011 Sum_probs=54.3
Q ss_pred eeEEEEEEEEeccCCCeeEEEEEecCCceEEEEEcCeEEEeeCCcEEEEEEEEEeecCCCCCeEEEEEEEE--c--CCc-
Q 044126 238 FTIKFPRTVTNIGLPNSTYKAGILQNSKISVNVVPEVLSFRSLNEKKSFIVTVTGKGLASGSIVSAALVWF--D--GSR- 312 (333)
Q Consensus 238 ~~~t~~rtvtNvg~~~~tY~~~v~~~~g~~v~v~P~~l~~~~~g~~~~~~Vt~~~~~~~~~~~~~G~i~~~--~--~~~- 312 (333)
...+.+.+++|.|+.+.+++.... |.-+++...| -.+ ++|++..++|+++......-+...+.|++. + +..
T Consensus 19 ~~~~~~~~i~N~g~~pl~i~~~~~-p~~~~~~~~~--~~I-~PG~~g~I~vt~~~~~~~~~G~~~~~i~v~~~~~~~~~~ 94 (220)
T 2qsv_A 19 DEGVVRLVVNNTDESDLQVAVVSL-PSFVSLDDRA--FRL-QAREPRELNLSLAVPRNMPPGMKDEPLVLEVTSPETGKK 94 (220)
T ss_dssp CCCEEEEEEEECSSSCEEEEEEEC-CTTEECSCCE--EEE-CSSSCEEEEEEECCCTTCCSEEEEEEEEEEEECTTTCCE
T ss_pred CcceEEEEEEeCCCCceEEEeccC-CCceEeeeCc--cee-CCCCceEEEEEEcchhcccCCceeeEEEEEEEcCCCCcc
Confidence 345667889999999998887643 6665554434 455 889999999999987643334556777764 3 222
Q ss_pred -eEEeeEEEE
Q 044126 313 -IVRSPIVVH 321 (333)
Q Consensus 313 -~vr~P~~v~ 321 (333)
..++|+...
T Consensus 95 ~~~~i~v~g~ 104 (220)
T 2qsv_A 95 AVDSVMVSLP 104 (220)
T ss_dssp EEEEEEEEEE
T ss_pred cccEEEEEEE
Confidence 446666653
No 42
>3qbt_B Inositol polyphosphate 5-phosphatase OCRL-1; protein transport, vesicular trafficking, GTPase, LOWE syndr immunoglobulin fold, RAB8A, endocytosis; HET: GNP; 2.00A {Homo sapiens}
Probab=91.08 E-value=1.7 Score=35.70 Aligned_cols=83 Identities=16% Similarity=-0.024 Sum_probs=59.9
Q ss_pred eEEEEEEEEeccCCCeeEEEEEecCC----ceEEEEEcCeEEEeeCCcEEEEEEEEEeecC------CCCCeEEEEEEEE
Q 044126 239 TIKFPRTVTNIGLPNSTYKAGILQNS----KISVNVVPEVLSFRSLNEKKSFIVTVTGKGL------ASGSIVSAALVWF 308 (333)
Q Consensus 239 ~~t~~rtvtNvg~~~~tY~~~v~~~~----g~~v~v~P~~l~~~~~g~~~~~~Vt~~~~~~------~~~~~~~G~i~~~ 308 (333)
..+-+.+++|+|.-..+|++...... .--+++.|..-++ .+|++..++|++.++.. ....-...-|++.
T Consensus 44 ~~~~~l~I~Ntg~vpa~F~f~~~~~~~~~~~~wl~v~P~~G~L-~Pge~~~I~v~~~v~~~~~~~ln~g~~~l~diLvL~ 122 (140)
T 3qbt_B 44 LQKEKFQISNNGQVPCHFSFIPKLNDSQYCKPWLRAEPFEGYL-EPNETVDISLDVYVSKDSVTILNSGEDKIEDILVLH 122 (140)
T ss_dssp CEEEEEEEEECSSSCEEEEEECCTTCSSSSCTTEEEESCEEEE-CTTCEEEEEEEECBCHHHHHHHHHSSSCSCEEEEEE
T ss_pred eeeeEEEEEcCCccceEEEEecCCCchhhhhHhhhcCCccccc-CCCCeeEEEEEEEEccCcccccccchhhhheeEEEE
Confidence 45667789999999999999753211 1136678999888 89999999999997541 1113345567775
Q ss_pred -cCCceEEeeEEEEe
Q 044126 309 -DGSRIVRSPIVVHS 322 (333)
Q Consensus 309 -~~~~~vr~P~~v~~ 322 (333)
.++....+|+...+
T Consensus 123 Ve~G~d~fI~v~g~~ 137 (140)
T 3qbt_B 123 LDRGKDYFLTISGNY 137 (140)
T ss_dssp ETTSCEEEEEEEEEE
T ss_pred eecCCcEEEEEeccc
Confidence 78888899987764
No 43
>1w8o_A Bacterial sialidase; 3D-structure, glycosidase, hydrolase, beta- propeller; HET: LBT CIT; 1.70A {Micromonospora viridifaciens} SCOP: b.1.18.2 b.18.1.1 b.68.1.1 PDB: 1w8n_A* 1eut_A 1euu_A* 1wcq_A* 2bzd_A* 2ber_A* 1eur_A 1eus_A*
Probab=80.33 E-value=16 Score=36.36 Aligned_cols=78 Identities=14% Similarity=0.018 Sum_probs=48.9
Q ss_pred CCceeeeccCCCceeEEEEEEEEeccCCCeeE-EEEEecCCceEEEEEcCeEEEeeCCcEEEEEEEEEeecCCCCCeEEE
Q 044126 225 YPSMAAQVSSGESFTIKFPRTVTNIGLPNSTY-KAGILQNSKISVNVVPEVLSFRSLNEKKSFIVTVTGKGLASGSIVSA 303 (333)
Q Consensus 225 ~pSi~~~~~~~~~~~~t~~rtvtNvg~~~~tY-~~~v~~~~g~~v~v~P~~l~~~~~g~~~~~~Vt~~~~~~~~~~~~~G 303 (333)
.|.+++... ++.+++.+|+|-+..+..- ++++..|.+.++.. ....+ ++|++.+++++|+.+.......|.=
T Consensus 364 ~~~~~~~~g----~~~~~~~~vtn~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~g~~~t~~~~vt~~~~~~~g~y~l 436 (601)
T 1w8o_A 364 IPDVALEPG----QQVTVPVAVTNQSGIAVPKPSLQLDASPDWQVQG--SVEPL-MPGRQAKGQVTITVPAGTTPGRYRV 436 (601)
T ss_dssp CCCEEECTT----CEEEEEEEEECCSSSCBSSCEEEEECCTTSEEEE--EECCB-CTTCEEEEEEEEECCTTCCCEEEEE
T ss_pred CccceecCC----ceeEEEEEEECCCceeccCceEEEecCCCcEEec--ccccc-CCCCceEEEEEEecCCCCCCCcEEe
Confidence 355555422 4778888999976543322 44466688888766 23455 7899999999999876443334443
Q ss_pred EEEEEc
Q 044126 304 ALVWFD 309 (333)
Q Consensus 304 ~i~~~~ 309 (333)
.+.+..
T Consensus 437 ~~~~~~ 442 (601)
T 1w8o_A 437 GATLRT 442 (601)
T ss_dssp EEEEEE
T ss_pred eEEEEe
Confidence 445544
No 44
>3qis_A Inositol polyphosphate 5-phosphatase OCRL-1; DENT disease, RAC1, RAB gtpases, APPL1, endocytic PATH golgi complex, hydrolase-protein binding complex; 2.30A {Homo sapiens} PDB: 2qv2_A
Probab=80.24 E-value=10 Score=35.96 Aligned_cols=85 Identities=14% Similarity=-0.035 Sum_probs=59.4
Q ss_pred eeEEEEEEEEeccCCCeeEEEEEecCCce-E---EEEEcCeEEEeeCCcEEEEEEEEEeecC------CCCCeEEEEEEE
Q 044126 238 FTIKFPRTVTNIGLPNSTYKAGILQNSKI-S---VNVVPEVLSFRSLNEKKSFIVTVTGKGL------ASGSIVSAALVW 307 (333)
Q Consensus 238 ~~~t~~rtvtNvg~~~~tY~~~v~~~~g~-~---v~v~P~~l~~~~~g~~~~~~Vt~~~~~~------~~~~~~~G~i~~ 307 (333)
...+-+.|++|+|.-..+|++........ . ++++|..-++ .+|++..++|++.+... ....-..--|++
T Consensus 46 ~~~~~~l~i~N~g~~pa~f~f~~~~~~~~~~~~wl~v~p~~g~l-~Pge~~~i~l~~~v~~~~~~~ln~g~~~l~diLvL 124 (366)
T 3qis_A 46 QLQKEKFQISNNGQVPCHFSFIPKLNDSQYCKPWLRAEPFEGYL-EPNETVDISLDVYVSKDSVTILNSGEDKIEDILVL 124 (366)
T ss_dssp CCEEEEEEEEECSSSCEEEEEECCTTCSSSSCTTEEEESCEEEE-CTTCEEEEEEEECBCTTTHHHHHHTSSCSCEEEEE
T ss_pred CeEEEEEEEEecCCceEEEEEEeCCCCCCCCCCcEEEeCCccEE-CCCCEEEEEEEEEECHHHHHHHhcCccccceEEEE
Confidence 45666778999999999999965432221 1 6778999888 89999999999988651 011233445666
Q ss_pred E-cCCceEEeeEEEEee
Q 044126 308 F-DGSRIVRSPIVVHSQ 323 (333)
Q Consensus 308 ~-~~~~~vr~P~~v~~~ 323 (333)
. .+++...+++-....
T Consensus 125 ~ve~G~d~FI~v~~~~~ 141 (366)
T 3qis_A 125 HLDRGKDYFLTISGNYL 141 (366)
T ss_dssp EETTSCEEEEEEEEEEC
T ss_pred EEeCCCcEEEEeccccC
Confidence 5 567777777766554
No 45
>2qsv_A Uncharacterized protein; MCSG, structural genomics, porphyromonas gingivalis W83, PSI protein structure initiative; 2.10A {Porphyromonas gingivalis}
Probab=79.73 E-value=18 Score=31.43 Aligned_cols=88 Identities=10% Similarity=0.109 Sum_probs=52.9
Q ss_pred CceeeeccCCCceeEEEEEEEEeccCCCeeEEEEEecCCceEEEEEcCeEEEeeCCcEEEEEEEEEeecCCCCC-e--EE
Q 044126 226 PSMAAQVSSGESFTIKFPRTVTNIGLPNSTYKAGILQNSKISVNVVPEVLSFRSLNEKKSFIVTVTGKGLASGS-I--VS 302 (333)
Q Consensus 226 pSi~~~~~~~~~~~~t~~rtvtNvg~~~~tY~~~v~~~~g~~v~v~P~~l~~~~~g~~~~~~Vt~~~~~~~~~~-~--~~ 302 (333)
..+-++... + ...+.+.+++|+|+.+...+-....-....+. ...-.+ ++||+..++|++++... .+. | ..
T Consensus 124 ~~~dfG~i~-g-~~~~~~f~i~N~G~~pL~I~~v~~scgct~~~--~~~~~i-~PGe~~~i~v~~~~~~~-~g~~~~~~~ 197 (220)
T 2qsv_A 124 TYLDMGQLD-G-ETTKAAIEIRNVGAGPLRLHSVTTRNPALTAV--PDRTEI-KPGGSTLLRIAVDPQVM-KAEGWQSIA 197 (220)
T ss_dssp CEEEEEECT-T-SCEEEEEEEEECSSSCEEEEEEEECSTTEEEE--ESCSEE-CTTCEEEEEEEECHHHH-HHTTCSEEE
T ss_pred eEEeeeccC-C-CeEEEEEEEEECCCCCEEEEEEEeCCCCEeee--cCCccC-CCCCEEEEEEEEecCCC-CCcccceec
Confidence 444444444 2 56778899999999887764333222344443 333356 89999999999998652 122 2 45
Q ss_pred EEEEEE-c--CCceEEeeEE
Q 044126 303 AALVWF-D--GSRIVRSPIV 319 (333)
Q Consensus 303 G~i~~~-~--~~~~vr~P~~ 319 (333)
..|.+. + ....+++.+.
T Consensus 198 ~~i~v~~N~~~~p~~~l~i~ 217 (220)
T 2qsv_A 198 ADISIICNDPQAPLRRIKVK 217 (220)
T ss_dssp EEEEEEESCTTCSEEEEEEE
T ss_pred cEEEEEECCCCCcEEEEEEE
Confidence 677653 3 2334455554
No 46
>3idu_A Uncharacterized protein; all beta-protein, structural genomics, PSI-2, protein structure initiative; 1.70A {Pyrococcus furiosus} PDB: 2kl6_A
Probab=78.29 E-value=9.7 Score=30.78 Aligned_cols=51 Identities=16% Similarity=0.106 Sum_probs=36.7
Q ss_pred eeEEEEEEEEeccCCC-eeEEEEEecCCceEEEEEcCeEEEeeCCcEEEEEEEEEe
Q 044126 238 FTIKFPRTVTNIGLPN-STYKAGILQNSKISVNVVPEVLSFRSLNEKKSFIVTVTG 292 (333)
Q Consensus 238 ~~~t~~rtvtNvg~~~-~tY~~~v~~~~g~~v~v~P~~l~~~~~g~~~~~~Vt~~~ 292 (333)
...+++.||+|.|..+ .-|++.+.. .|-.+.-. .+.+ ++|++++++++..+
T Consensus 33 ~~~ti~vtV~N~G~~~a~~~~V~lyv-ng~~v~t~--~v~L-a~G~s~tv~f~~~~ 84 (127)
T 3idu_A 33 KLAEYEVHVKNLGGIGVPSTKVRVYI-NGTLYKNW--TVSL-GPKEEKVLTFNWTP 84 (127)
T ss_dssp CCEEEEEEEEECSSSCEEEEEEEEEE-TTEEEEEE--EEEE-CTTCEEEEEEEECC
T ss_pred CEEEEEEEEEECCCCccCCcEEEEEE-CCEEEeeE--Eecc-CCCCeEEEEEEEEc
Confidence 6789999999999754 567777655 34444322 3456 89999998887764
No 47
>1wic_A Hypothetical protein riken cDNA 6030424E15; beta sandwich fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.1.11.2
Probab=72.93 E-value=23 Score=29.24 Aligned_cols=52 Identities=21% Similarity=0.142 Sum_probs=43.5
Q ss_pred eEEEEEEEEeccCCCeeEEEEEecCCceEEEEEcCeEEEeeCCcEEEEEEEEEee
Q 044126 239 TIKFPRTVTNIGLPNSTYKAGILQNSKISVNVVPEVLSFRSLNEKKSFIVTVTGK 293 (333)
Q Consensus 239 ~~t~~rtvtNvg~~~~tY~~~v~~~~g~~v~v~P~~l~~~~~g~~~~~~Vt~~~~ 293 (333)
..+-..+|+|.++....|++.-.+|.-.. |.|..=.+ .++++.+++|++.+.
T Consensus 36 ~~~~~l~L~N~s~~~VaFKVKTT~p~~y~--VrP~~GiI-~P~~s~~V~V~lq~~ 87 (152)
T 1wic_A 36 EKKTLIVLTNVTKNIVAFKVRTTAPEKYR--VKPSNSSC-DPGASIDIIVSPHGG 87 (152)
T ss_dssp CCCEEEEEEBCSSSCEEEEEEESCTTTEE--EESSEEEE-CTTCEEEEEEEECSS
T ss_pred eEEEEEEEEcCCCCeEEEEEECCCCCcee--ecCCCcEE-CCCCeEEEEEEecCc
Confidence 44567899999999999999998888655 58887666 899999999999764
No 48
>3zyz_A Beta-D-glucoside glucohydrolase; HET: NAG BGC; 2.10A {Hypocrea jecorina} PDB: 3zz1_A* 4i8d_A*
Probab=72.90 E-value=5 Score=41.78 Aligned_cols=55 Identities=9% Similarity=0.030 Sum_probs=35.5
Q ss_pred eeEEEEEEEEeccCCCe--eEEEEEecCCce------EEEEEcCeEEEeeCCcEEEEEEEEEeec
Q 044126 238 FTIKFPRTVTNIGLPNS--TYKAGILQNSKI------SVNVVPEVLSFRSLNEKKSFIVTVTGKG 294 (333)
Q Consensus 238 ~~~t~~rtvtNvg~~~~--tY~~~v~~~~g~------~v~v~P~~l~~~~~g~~~~~~Vt~~~~~ 294 (333)
...+++.+|||+|+.+. +-++=+..|.+- ++.- =.++.+ ++||+++++++++...
T Consensus 613 ~~~~vsv~VtNtG~~~G~EVvQlYv~~~~~~~~~P~k~L~g-F~kv~L-~pGes~~V~~~l~~~~ 675 (713)
T 3zyz_A 613 NVATVTVDIANSGQVTGAEVAQLYITYPSSAPRTPPKQLRG-FAKLNL-TPGQSGTATFNIRRRD 675 (713)
T ss_dssp EEEEEEEEEEECSSSCEEEEEEEEEECCTTSSSCCSCEEEE-EEEEEE-CTTCEEEEEEEEEGGG
T ss_pred CeEEEEEEEEeCCCCccceeeeeeeecCCCCCCchhHHhhh-ccccee-CCCCeEEEEEEEcHHH
Confidence 45788999999998544 444444444321 2222 123345 8999999999998754
No 49
>1z9l_A Vesicle-associated membrane protein-associated protein A; VAP-A, cytoplasmic domain, protein binding; HET: MSE; 1.70A {Rattus norvegicus} PDB: 1z9o_A 2rr3_A 3ikk_A
Probab=70.29 E-value=20 Score=28.45 Aligned_cols=53 Identities=9% Similarity=-0.019 Sum_probs=43.8
Q ss_pred eeEEEEEEEEeccCCCeeEEEEEecCCceEEEEEcCeEEEeeCCcEEEEEEEEEee
Q 044126 238 FTIKFPRTVTNIGLPNSTYKAGILQNSKISVNVVPEVLSFRSLNEKKSFIVTVTGK 293 (333)
Q Consensus 238 ~~~t~~rtvtNvg~~~~tY~~~v~~~~g~~v~v~P~~l~~~~~g~~~~~~Vt~~~~ 293 (333)
...+-..+|+|.++....|++.-.+|.-.. |.|..=.+ .+|++..+.|++.+.
T Consensus 27 ~~~~~~l~L~N~s~~~vaFKVKTT~p~~y~--VrP~~G~i-~P~~s~~v~V~~~~~ 79 (128)
T 1z9l_A 27 DVVTTNLKLQNPSDRKVCFKVKTTAPRRYC--VRPNSGVI-DPGSIVTVSVMLQPF 79 (128)
T ss_dssp SCEEEEEEEECCSSSCEEEEEEESCGGGEE--EESCEEEE-CTTCEEEEEEEECCC
T ss_pred ceEEEEEEEECCCCCeEEEEEECCCCCceE--EeCCCcEE-CCCCeEEEEEEECcC
Confidence 356777899999999999999998887655 58887566 899999999998864
No 50
>2kq1_A BH0266 protein; solution NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; NMR {Bacillus halodurans}
Probab=68.95 E-value=1.3 Score=35.26 Aligned_cols=56 Identities=18% Similarity=0.112 Sum_probs=37.3
Q ss_pred eEEEEEEEEeccCCCeeEEEEEe-cCCceEEEEEcCeEEEe-eCCcEEEEEEEEEeec
Q 044126 239 TIKFPRTVTNIGLPNSTYKAGIL-QNSKISVNVVPEVLSFR-SLNEKKSFIVTVTGKG 294 (333)
Q Consensus 239 ~~t~~rtvtNvg~~~~tY~~~v~-~~~g~~v~v~P~~l~~~-~~g~~~~~~Vt~~~~~ 294 (333)
...+..-++|.+.+..+..+.++ .|.|+++++.|.+++++ ..-++++|.|+++...
T Consensus 54 ~i~~~vDLs~l~~G~~~vpv~v~~lp~~v~v~v~P~~V~V~i~~~~~k~~pV~v~~~g 111 (119)
T 2kq1_A 54 SYEVFVDLTEAGEGSHTVDVEHRGFPGDLAVTVEPRMARVQLEERQTVSVPVTVEMIN 111 (119)
T ss_dssp CCEEEEECTTCCBEEEEEECEEESSCTTSEEEESCCEEEEEEESCCCCCCCCCCCCCC
T ss_pred CEEEEEECccCCCCeEEEEEEEecCCCCeEEEEcCCEEEEEEEEEEEEEEEEEEEECC
Confidence 34445556676654444444555 58899999999987665 5567778877766544
No 51
>1row_A SSP-19, MSP-domain protein like family member; beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Caenorhabditis elegans} SCOP: b.1.11.2
Probab=66.59 E-value=25 Score=27.48 Aligned_cols=50 Identities=16% Similarity=0.162 Sum_probs=41.6
Q ss_pred EEEEEEEeccCCCeeEEEEEecCCceEEEEEcCeEEEeeCCcEEEEEEEEEee
Q 044126 241 KFPRTVTNIGLPNSTYKAGILQNSKISVNVVPEVLSFRSLNEKKSFIVTVTGK 293 (333)
Q Consensus 241 t~~rtvtNvg~~~~tY~~~v~~~~g~~v~v~P~~l~~~~~g~~~~~~Vt~~~~ 293 (333)
+.+.+++|.++....|++.-..|.-.. |.|..=.+ .+|++.++.|+..+.
T Consensus 18 ~~~l~L~N~t~~~vaFKVKtT~p~~y~--VrP~~G~I-~P~~~~~i~I~~q~~ 67 (109)
T 1row_A 18 SSTHKLVNGGAEKIVFKIKSSNNNEYR--IAPVFGFV-DPSGSKDVVITRTAG 67 (109)
T ss_dssp EEEEEEEECSSSCEEEEEEESCSSSEE--EECSEEEE-CTTEEEEEEEEECSC
T ss_pred eEEEEEEcCCCCeEEEEEEeCCCCceE--EcCCceEE-CCCCeEEEEEEeCCC
Confidence 456789999999999999988887755 48887566 889999999998874
No 52
>1msp_A MSP, major sperm protein; cytoskeletal protein, cell motility protein; 2.50A {Ascaris suum} SCOP: b.1.11.2 PDB: 3msp_A 2bvu_A 2msp_A 1grw_A
Probab=66.24 E-value=26 Score=27.95 Aligned_cols=51 Identities=18% Similarity=0.157 Sum_probs=42.7
Q ss_pred eEEEEEEEEeccCCCeeEEEEEecCCceEEEEEcCeEEEeeCCcEEEEEEEEEe
Q 044126 239 TIKFPRTVTNIGLPNSTYKAGILQNSKISVNVVPEVLSFRSLNEKKSFIVTVTG 292 (333)
Q Consensus 239 ~~t~~rtvtNvg~~~~tY~~~v~~~~g~~v~v~P~~l~~~~~g~~~~~~Vt~~~ 292 (333)
..+-..+|+|.++....|++.-.+|.-.. |.|..=.+ .++++..+.|++.+
T Consensus 26 ~~~~~l~l~N~s~~~vaFKVKTT~p~~y~--VrP~~Gii-~P~~s~~v~V~~q~ 76 (126)
T 1msp_A 26 KHTYHIKITNAGGRRIGWAIKTTNMRRLS--VDPPCGVL-DPKEKVLMAVSCDT 76 (126)
T ss_dssp CCCEEEEEEECSSSCEEEEEEESCTTTEE--EESCEEEE-CTTCEEEEEEEECC
T ss_pred ceEEEEEEECCCCCeEEEEEEcCCCCcEE--EECCCeEE-CCCCEEEEEEEecC
Confidence 34556889999999999999999988755 58887667 88999999999887
No 53
>2x41_A Beta-glucosidase; hydrolase, TIM barrel fold, fibronectin type III fold; HET: BGC; 2.05A {Thermotoga neapolitana} PDB: 2x40_A* 2x42_A*
Probab=66.03 E-value=8.2 Score=40.15 Aligned_cols=71 Identities=11% Similarity=0.124 Sum_probs=42.6
Q ss_pred CCCCCceeeeccC--CCceeEEEEEEEEeccCC--CeeEEEEEecCCc-e-----EEEEEcCeE-EEeeCCcEEEEEEEE
Q 044126 222 DLNYPSMAAQVSS--GESFTIKFPRTVTNIGLP--NSTYKAGILQNSK-I-----SVNVVPEVL-SFRSLNEKKSFIVTV 290 (333)
Q Consensus 222 ~lN~pSi~~~~~~--~~~~~~t~~rtvtNvg~~--~~tY~~~v~~~~g-~-----~v~v~P~~l-~~~~~g~~~~~~Vt~ 290 (333)
-|-|.+|....+. ......+++.+|||+|+. .++-++=+..|.+ + ++.- =.++ .+ ++||++++++++
T Consensus 597 GLSYTtF~ys~~~~~~~~~~~~v~v~VtNtG~~~G~eVvQlYv~~~~~~~~~P~k~L~g-F~kv~~L-~pGes~~V~~~l 674 (721)
T 2x41_A 597 GLSYTTFEYSDLNVSFDGETLRVQYRIENTGGRAGKEVSQVYIKAPKGKIDKPFQELKA-FHKTRLL-NPGESEEVVLEI 674 (721)
T ss_dssp CBCSSCEEEEEEEEEECSSEEEEEEEEEECSSSCBCCEEEEEEECCCSSSCCCSCEEEE-EEECCCB-CTTCEEEEEEEE
T ss_pred CCCcceeEeeceEeecCCCeEEEEEEEEECCCCCCcEEeeEEEccCCCCCCCchHHhhc-ccccccC-CCCCeEEEEEEE
Confidence 3556666555442 012468899999999974 4444554554432 1 1111 1223 34 899999999999
Q ss_pred Eeec
Q 044126 291 TGKG 294 (333)
Q Consensus 291 ~~~~ 294 (333)
+...
T Consensus 675 ~~~~ 678 (721)
T 2x41_A 675 PVRD 678 (721)
T ss_dssp EGGG
T ss_pred CHHH
Confidence 8754
No 54
>1m1s_A WR4; structural genomics, major sperm protein, bioinformatics, PSI, protein structure initiative; 1.80A {Caenorhabditis elegans} SCOP: b.1.11.2
Probab=65.91 E-value=23 Score=28.18 Aligned_cols=51 Identities=12% Similarity=0.017 Sum_probs=42.1
Q ss_pred EEEEEEEeccCCCeeEEEEEecCCceEEEEEcCeEEEeeCCcEEEEEEEEEeec
Q 044126 241 KFPRTVTNIGLPNSTYKAGILQNSKISVNVVPEVLSFRSLNEKKSFIVTVTGKG 294 (333)
Q Consensus 241 t~~rtvtNvg~~~~tY~~~v~~~~g~~v~v~P~~l~~~~~g~~~~~~Vt~~~~~ 294 (333)
+.+.+++|.++....|++.-..|.-..| .|..=.+ .+|++.++.|+..+..
T Consensus 26 ~~~l~L~N~t~~~vAFKVKtT~p~~YrV--rP~~G~I-~Pg~~~~I~I~~q~~~ 76 (116)
T 1m1s_A 26 NSTHNITSESDSRLAFKVKSSNNEHYRV--RPVYGFV-DAKGKSKLDINRLPGP 76 (116)
T ss_dssp EEEEEEEECSSSEEEEEEEESCTTTEEE--ECSEEEE-CTTCEEEEEEEECSCC
T ss_pred EEEEEEECCCCCeEEEEEEecCCCceEE--cCCceEE-CCCCeEEEEEEeCCCC
Confidence 5668899999999999999888877654 7887556 8899999999988753
No 55
>2cri_A Vesicle-associated membrane protein-associated protein A; VAP-A, VAP-33, beta sandwitch fold, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=59.46 E-value=30 Score=28.31 Aligned_cols=52 Identities=10% Similarity=0.004 Sum_probs=43.3
Q ss_pred eEEEEEEEEeccCCCeeEEEEEecCCceEEEEEcCeEEEeeCCcEEEEEEEEEee
Q 044126 239 TIKFPRTVTNIGLPNSTYKAGILQNSKISVNVVPEVLSFRSLNEKKSFIVTVTGK 293 (333)
Q Consensus 239 ~~t~~rtvtNvg~~~~tY~~~v~~~~g~~v~v~P~~l~~~~~g~~~~~~Vt~~~~ 293 (333)
..+-..+|+|.++....|++.-.+|.-.. |.|..=.+ .++++..+.|++.+.
T Consensus 32 ~~~~~l~L~N~s~~~VaFKVKTT~p~~y~--VrP~~GiI-~P~~s~~v~V~l~~~ 83 (147)
T 2cri_A 32 VVTTNLKLQNPSDRKVCFKVKTTAPRRYC--VRPNSGII-DPGSIVTVSVMLQPF 83 (147)
T ss_dssp CCCEEEEEECCSSSCEEEEEEESCTTSEE--EESSEEEC-CTTCEEEEEEEECCC
T ss_pred eEEEEEEEECCCCCcEEEEEECCCCccEE--EcCCCcEE-CCCCeEEEEEEECCC
Confidence 45667889999999999999999998755 48887555 899999999999873
No 56
>3sd2_A Putative member of DUF3244 protein family; immunoglobulin-like beta-sandwich, structural genomics, JOIN for structural genomics; HET: MSE; 1.40A {Bacteroides thetaiotaomicron}
Probab=56.99 E-value=50 Score=25.64 Aligned_cols=66 Identities=12% Similarity=0.056 Sum_probs=45.5
Q ss_pred ceeeeccCCCceeEEEEEEEEeccCCCeeEEEEEecCCceEEEEEcCeEEEeeCCcEEEEEEEEEeecCCCCCeEEEEEE
Q 044126 227 SMAAQVSSGESFTIKFPRTVTNIGLPNSTYKAGILQNSKISVNVVPEVLSFRSLNEKKSFIVTVTGKGLASGSIVSAALV 306 (333)
Q Consensus 227 Si~~~~~~~~~~~~t~~rtvtNvg~~~~tY~~~v~~~~g~~v~v~P~~l~~~~~g~~~~~~Vt~~~~~~~~~~~~~G~i~ 306 (333)
.+++.|.+ ....++.||+|-..+...|.-.+..|.-+.+ .+ ...++-.|+|.+.... .|..|..+
T Consensus 35 vlsV~F~~---~~~~vTItItNe~TG~~VYs~~~s~p~~i~I-------dL-nge~sG~Y~IeI~~~~----~~LtG~F~ 99 (101)
T 3sd2_A 35 ILNVSFGR---AKDYAIITVTNKATGEIVHSKTYHNTSIVMI-------DM-SSCEKGEYTIHIILND----CLLEGTFT 99 (101)
T ss_dssp EEEEEESS---CCSCEEEEEEETTTCCEEEEEEESSCSEEEE-------EC-TTSCSEEEEEEEEETT----EEEEEEEE
T ss_pred EEEEEecc---CCCcEEEEEEECCCCcEEEEEeccCCcEEEE-------Ec-CCCcCceEEEEEEeCC----cEEEEEEE
Confidence 67777765 4567889999986678899887776543222 22 3455788888888754 67788765
Q ss_pred E
Q 044126 307 W 307 (333)
Q Consensus 307 ~ 307 (333)
+
T Consensus 100 i 100 (101)
T 3sd2_A 100 V 100 (101)
T ss_dssp E
T ss_pred e
Confidence 4
No 57
>3abz_A Beta-glucosidase I; glycoside hydrolase family3 beta-glucosidase, PA14 domain, H; 2.15A {Kluyveromyces marxianus} PDB: 3ac0_A*
Probab=56.77 E-value=27 Score=37.03 Aligned_cols=71 Identities=14% Similarity=0.089 Sum_probs=43.0
Q ss_pred CCCCCCceeee--ccCCCceeEEEEEEEEecc-CCC--eeEEEEEecCCc------eEEEEEcCeEEEeeCCcEEEEEEE
Q 044126 221 KDLNYPSMAAQ--VSSGESFTIKFPRTVTNIG-LPN--STYKAGILQNSK------ISVNVVPEVLSFRSLNEKKSFIVT 289 (333)
Q Consensus 221 ~~lN~pSi~~~--~~~~~~~~~t~~rtvtNvg-~~~--~tY~~~v~~~~g------~~v~v~P~~l~~~~~g~~~~~~Vt 289 (333)
.-|-|.+|... .+.-..+..+++.+|||+| +.+ ++-++=+..|.+ -++.-. .++.+ ++||+++++++
T Consensus 716 ~GLSYTtF~ys~~~l~v~~~~~~v~v~V~NtG~~~~G~eVvQlYv~~~~~~~~~P~k~L~gF-~kv~L-~pGes~~V~~~ 793 (845)
T 3abz_A 716 YGLSYTTFELDISDFKVTDDKIAISVDVKNTGDKFAGSEVVQVYFSALNSKVSRPVKELKGF-EKVHL-EPGEKKTVNID 793 (845)
T ss_dssp CCBCSSCEEEEEEEEEECSSEEEEEEEEEECCSSCCEEEEEEEEEEESSCSSCCCSCEEEEE-EEEEE-CTTCEEEEEEE
T ss_pred CCCcceeEEEecccccccCCeEEEEEEEEECCcCCCcceeeeeeEeCCCCCcchhhheeccc-eeEEE-CCCCEEEEEEE
Confidence 34677777766 4420024688999999999 643 344444444432 122221 22355 89999999999
Q ss_pred EE-ee
Q 044126 290 VT-GK 293 (333)
Q Consensus 290 ~~-~~ 293 (333)
++ ..
T Consensus 794 l~~~~ 798 (845)
T 3abz_A 794 LELKD 798 (845)
T ss_dssp EEHHH
T ss_pred eCChH
Confidence 99 53
No 58
>3q48_A Chaperone CUPB2; IG fold, periplasmic chaperone; 2.50A {Pseudomonas aeruginosa}
Probab=53.33 E-value=80 Score=28.32 Aligned_cols=86 Identities=14% Similarity=0.093 Sum_probs=53.4
Q ss_pred eEEEEEEEEeccCCCeeEEEEEecCC--------ceEEEEEcCeEEEeeCCcEEEEEEEEEeecCCCCC-eEEEEEEEEc
Q 044126 239 TIKFPRTVTNIGLPNSTYKAGILQNS--------KISVNVVPEVLSFRSLNEKKSFIVTVTGKGLASGS-IVSAALVWFD 309 (333)
Q Consensus 239 ~~t~~rtvtNvg~~~~tY~~~v~~~~--------g~~v~v~P~~l~~~~~g~~~~~~Vt~~~~~~~~~~-~~~G~i~~~~ 309 (333)
....+.+|+|.++.+..-++-++... ...+.++|..+++ .+|+++.++|.......+.+. -+| ||.+.+
T Consensus 43 ~k~~sl~l~N~~~~P~LvQsWid~~~~~~~p~~~~~pfivtPPl~rl-~pg~~q~lRI~~~~~~LP~DrESlf-~lnv~e 120 (257)
T 3q48_A 43 EREVTLRVSNTSGTPVLAQAWIDDGRQDVPPEELQVPFSVTPAVTRV-EPNGGAVLRIAYLKAPLPTDRESLF-WLNILE 120 (257)
T ss_dssp CSEEEEEEEECSSSCEEEEEEEESSCCSSCGGGGCCSEEEESSEEEE-CTTEEEEEEEEECCCCCCSSSCEEE-EEEEEE
T ss_pred CcEEEEEEEeCCCCeEEEEEEEEcCCCccCcccccCCEEEcCCEEEE-CCCCceEEEEEECCCCCCCCceeEE-EEEeee
Confidence 45677899998876444444444321 2347889999999 889999999977654334332 222 333321
Q ss_pred ------C-Cc------eEEeeEEEEeeccc
Q 044126 310 ------G-SR------IVRSPIVVHSQGLQ 326 (333)
Q Consensus 310 ------~-~~------~vr~P~~v~~~~~~ 326 (333)
. .. .-|+|+-+++..+.
T Consensus 121 IPp~~~~~~n~Lqiair~rIKLFyRP~~L~ 150 (257)
T 3q48_A 121 VPPRDEDENNALQFSFRSRFKLFFRPSQLK 150 (257)
T ss_dssp ECCC---------CCEEEEEEEEEECTTCC
T ss_pred cCCCCCCCCceEEEEEEEEEEEEEecccCc
Confidence 1 11 34788888877653
No 59
>4ay0_A Chaperone protein CAF1M; amino acid motifs, bacterial capsules, bacterial proteins, gene expression regulation, molecular chaperones, binding; 1.52A {Yersinia pestis} PDB: 1p5v_A 1p5u_A 1z9s_A 2os7_A 3dos_A 3dpb_A 3dsn_A 4b0m_M 4az8_A 4ayf_A
Probab=44.94 E-value=1.1e+02 Score=26.65 Aligned_cols=87 Identities=13% Similarity=0.046 Sum_probs=51.3
Q ss_pred eEEEEEEEEeccCCCeeEEEEEecCC-----ceEEEEEcCeEEEeeCCcEEEEEEEEEeecCCCCC---eEEEEEEE--E
Q 044126 239 TIKFPRTVTNIGLPNSTYKAGILQNS-----KISVNVVPEVLSFRSLNEKKSFIVTVTGKGLASGS---IVSAALVW--F 308 (333)
Q Consensus 239 ~~t~~rtvtNvg~~~~tY~~~v~~~~-----g~~v~v~P~~l~~~~~g~~~~~~Vt~~~~~~~~~~---~~~G~i~~--~ 308 (333)
...++.+|+|.++....-++-++... ..-+.++|..+++ .+|+.+.++|.......+.+. |++-...+ .
T Consensus 27 ~k~~sl~l~N~~~~p~LvQswv~~~~~~~~~~~pFivtPPl~Rl-~p~~~q~lRI~~~~~~LP~DRESlf~lnv~eIPp~ 105 (218)
T 4ay0_A 27 AAGVMVSVKNTQDYPVLIQSRIYDENKEKESEDPFVVTPPLFRL-DAKQQNSLRIAQAGGVFPRDKESLKWLCVKGIPPK 105 (218)
T ss_dssp CSCEEEEEECCSSSCEEEEEEEECTTSCCCSSCSEEEESSEEEE-CTTCEEEEEEEECSCCCCSSSCEEEEEEEEEECC-
T ss_pred CcEEEEEEEcCCCCCEEEEEEEecCCCCccccCCEEECCCeEEe-CCCCceEEEEEecCCCCCcCcEEEEEEEEEecCCC
Confidence 45667889998876544444454311 1236789999999 889999999987765444333 22222222 1
Q ss_pred c--CCceE------EeeEEEEeeccc
Q 044126 309 D--GSRIV------RSPIVVHSQGLQ 326 (333)
Q Consensus 309 ~--~~~~v------r~P~~v~~~~~~ 326 (333)
+ ....+ |+++-+++..+.
T Consensus 106 ~~~~~n~lqia~r~rIKlFyRP~~L~ 131 (218)
T 4ay0_A 106 DEDIWVDVQFAINNCIKLLVRPNELK 131 (218)
T ss_dssp -------------CEEEEEEECTTCC
T ss_pred CccccceeEEEEEEEEEEEEcCcccC
Confidence 1 22222 678777776554
No 60
>2l04_A Major tail protein V; bacteriophage lambda, phage tail, GPV, IG-like domain, viral; NMR {Enterobacteria phage lambda}
Probab=43.18 E-value=25 Score=26.61 Aligned_cols=26 Identities=19% Similarity=0.328 Sum_probs=19.7
Q ss_pred EEEEcCeEEEeeCCcEEEEEEEEEeec
Q 044126 268 VNVVPEVLSFRSLNEKKSFIVTVTGKG 294 (333)
Q Consensus 268 v~v~P~~l~~~~~g~~~~~~Vt~~~~~ 294 (333)
|++.|..+++ ..|++..++.++.+..
T Consensus 9 i~l~~~~~~l-~vG~t~~L~atv~P~~ 34 (91)
T 2l04_A 9 MTVTPASTSV-VKGQSTTLTVAFQPEG 34 (91)
T ss_dssp EEEECCCEEE-ETTCEEEEEEEECCSS
T ss_pred EEEeCCceEE-EcCCEEEEEEEEeccc
Confidence 5567888888 6788888888777654
No 61
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=42.98 E-value=40 Score=26.94 Aligned_cols=54 Identities=13% Similarity=0.073 Sum_probs=34.8
Q ss_pred eeEEEEEEEEeccCCCeeEE--------EEEecCCceEEE---------EEcCeEEEeeCCcEEEEEEEEEe
Q 044126 238 FTIKFPRTVTNIGLPNSTYK--------AGILQNSKISVN---------VVPEVLSFRSLNEKKSFIVTVTG 292 (333)
Q Consensus 238 ~~~t~~rtvtNvg~~~~tY~--------~~v~~~~g~~v~---------v~P~~l~~~~~g~~~~~~Vt~~~ 292 (333)
+...++.+|+|.++.+.+.+ +.+....|-.|- ---...++ ++||+++|+++.+.
T Consensus 18 ~~v~~~ltv~N~s~~~v~l~f~Sgq~~Df~v~d~~G~~VwrwS~~~~FtQa~~~~tl-~pGE~~~f~~~w~~ 88 (120)
T 3isy_A 18 EQIKFNMSLKNQSERAIEFQFSTGQKFELVVYDSEHKERYRYSKEKMFTQAFQNLTL-ESGETYDFSDVWKE 88 (120)
T ss_dssp SCEEEEEEEEECSSSCEEEEESSSCCEEEEEECTTCCEEEETTTTCCCCCCCEEEEE-CTTCEEEEEEEESS
T ss_pred CeEEEEEEEEcCCCCcEEEEeCCCCEEEEEEECCCCCEEEEccccchhhhhhceEEE-CCCCEEEEEEEeCC
Confidence 57889999999997654433 333333443332 01223466 89999999999984
No 62
>2xg5_A PAPD, chaperone protein PAPD; chaperone, chaperone-surface active protein complex; HET: EC2 EC5; 2.00A {Escherichia coli} PDB: 1pdk_A 2uy6_A 2uy7_A 2j2z_A 2xg4_A* 2w07_A* 3me0_A* 1n0l_A 2wmp_A 3dpa_A 2j7l_A 1qpp_A 1qpx_A
Probab=39.31 E-value=1.9e+02 Score=25.05 Aligned_cols=86 Identities=10% Similarity=0.041 Sum_probs=54.2
Q ss_pred eEEEEEEEEeccCC-CeeEEEEEecCC-----ceEEEEEcCeEEEeeCCcEEEEEEEEEe--ecCCCCC-eEEEEEEEEc
Q 044126 239 TIKFPRTVTNIGLP-NSTYKAGILQNS-----KISVNVVPEVLSFRSLNEKKSFIVTVTG--KGLASGS-IVSAALVWFD 309 (333)
Q Consensus 239 ~~t~~rtvtNvg~~-~~tY~~~v~~~~-----g~~v~v~P~~l~~~~~g~~~~~~Vt~~~--~~~~~~~-~~~G~i~~~~ 309 (333)
....+.+|+|.++. ...-++-++... ...+.++|..+++ .+++++.++|.... ...+.+. -+| ||.+.+
T Consensus 15 ~k~~sl~l~N~~~~~p~LvQsWi~~~~~~~~~~~pfivtPPl~rl-~p~~~q~lRI~~~~~~~~lP~DrESlf-~lnv~e 92 (218)
T 2xg5_A 15 EKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRL-EPGAKSMVRLSTTPDISKLPQDRESLF-YFNLRE 92 (218)
T ss_dssp SSEEEEEEEECCSSSCEEEEEEEECTTSCEECSSSEEEECSEEEE-CTTCEEEEEEEECGGGGGSCSSSCEEE-EEEEEE
T ss_pred CCEEEEEEEcCCCCCcEEEEEEEecCCCCccccCCEEEcCCeEEE-CCCCceEEEEEecCCCCCCCCCceEEE-EEEeec
Confidence 45667888998865 444444454422 1236789999999 89999999998776 3444443 222 443331
Q ss_pred ------CCc------eEEeeEEEEeeccc
Q 044126 310 ------GSR------IVRSPIVVHSQGLQ 326 (333)
Q Consensus 310 ------~~~------~vr~P~~v~~~~~~ 326 (333)
..+ .-|+|+-+++..+.
T Consensus 93 IPp~~~~~n~lqia~r~rIKlFyRP~~l~ 121 (218)
T 2xg5_A 93 IPPRSEKANVLQIALQTKIKLFYRPAAIK 121 (218)
T ss_dssp ECCCCCCTTEEEEEEEEEEEEEEECGGGC
T ss_pred CCCCCCCCceEEEEehheeeEEEcCcccc
Confidence 223 33788888887764
No 63
>3rfr_A PMOB; membrane, oxidoreductase; 2.68A {Methylocystis SP} PDB: 3chx_A
Probab=38.59 E-value=1.6e+02 Score=28.40 Aligned_cols=48 Identities=10% Similarity=0.077 Sum_probs=32.0
Q ss_pred eeEEEEEEEEeccCCCeeEEEEEec-----------------CC------ceEEEEEcCeEEEeeCCcEEEEEEEEEe
Q 044126 238 FTIKFPRTVTNIGLPNSTYKAGILQ-----------------NS------KISVNVVPEVLSFRSLNEKKSFIVTVTG 292 (333)
Q Consensus 238 ~~~t~~rtvtNvg~~~~tY~~~v~~-----------------~~------g~~v~v~P~~l~~~~~g~~~~~~Vt~~~ 292 (333)
+..+++.+|||.|+..... -+... |. | ++ +|+ -+ .+||+++++|+++.
T Consensus 298 R~l~~~~~VtN~g~~pvrl-geF~tA~vrFlnp~v~~~~~~~p~~l~a~~G--L~-s~~--pI-~PGETrt~~V~a~d 368 (419)
T 3rfr_A 298 RELTINVKVKNGTSQPVRL-GEYTAAGLRFLNPTVFTQKPDFPDYLLADRG--LS-NDD--VI-APGESKEIVVKIQD 368 (419)
T ss_dssp SEEEEEEEEECCSSSCBEE-EEEECSSCEEECTTTCSSCCCCCTTTEESCC--CC-CCC--CB-CTTCEEEEEEEEEC
T ss_pred cEEEEEEEEecCCCCceEE-eeEEEccEEEeCcccccCCCCCchhhhhccC--CC-CCC--Cc-CCCcceEEEEEeeh
Confidence 6788899999999865422 11110 11 3 44 555 45 89999999988885
No 64
>1wgl_A TOLL-interacting protein; CUE domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, immune system; NMR {Homo sapiens} SCOP: a.5.2.4
Probab=38.11 E-value=17 Score=25.43 Aligned_cols=29 Identities=10% Similarity=0.210 Sum_probs=23.5
Q ss_pred HHHHHHHHHHhhCCCCCHHHHHHHHHhcC
Q 044126 120 HAAGVAAYVKSFHPDWSPSAIKSAIMTTA 148 (333)
Q Consensus 120 ~VAG~aALl~~~~p~~sp~~ik~~L~~tA 148 (333)
..--.+..|++.+|+++...|+.+|...-
T Consensus 8 ~~ee~l~~L~emFP~ld~~~I~~vL~a~~ 36 (59)
T 1wgl_A 8 CSEEDLKAIQDMFPNMDQEVIRSVLEAQR 36 (59)
T ss_dssp SCHHHHHHHHHHCSSSCHHHHHHHHTTTT
T ss_pred CCHHHHHHHHHHCCCCCHHHHHHHHHHcC
Confidence 33445678999999999999999997664
No 65
>4djm_A DRAB; chaperone, PILI; 2.52A {Escherichia coli}
Probab=35.24 E-value=1.9e+02 Score=25.59 Aligned_cols=59 Identities=14% Similarity=0.103 Sum_probs=39.1
Q ss_pred eEEEEEEEEeccCCCeeEEEEEecCC---ceEEEEEcCeEEEeeCCcEEEEEEEEEeecCCCC
Q 044126 239 TIKFPRTVTNIGLPNSTYKAGILQNS---KISVNVVPEVLSFRSLNEKKSFIVTVTGKGLASG 298 (333)
Q Consensus 239 ~~t~~rtvtNvg~~~~tY~~~v~~~~---g~~v~v~P~~l~~~~~g~~~~~~Vt~~~~~~~~~ 298 (333)
....+.+|+|.++.+.--++-++... ..-+.++|..+++ .+++.+.++|.......+.+
T Consensus 37 ~k~~sl~l~N~~~~P~LvQsWv~~~~~~~~~pfivtPPlfRl-ep~~~q~lRIi~~~~~LP~D 98 (239)
T 4djm_A 37 SSGETLTVINDQDYPMLVQSEVLSEDQKSPAPFVVTPPLFRL-DGQQSSRLRIVRTGGEFPPD 98 (239)
T ss_dssp SSCEEEEEEECSSSCEEEEEEEECTTSSSBCSEEEESSEEEE-CTTEEEEEEEEECSCCCCSS
T ss_pred CCEEEEEEEeCCCCcEEEEEEEEcCCCCccCCEEEcCCeEEE-CCCCceEEEEEECCCCCCCC
Confidence 45567888998865433333444311 2347889999999 78999999997765433433
No 66
>4ep8_B Urease subunit beta; alpha-beta barrel, nickel metalloenzyme, hydrolase, radiatio; HET: KCX; 1.55A {Enterobacter aerogenes} PDB: 1a5l_B 1a5k_B 1a5n_B 1a5o_B 1ef2_B* 1ejr_B* 1ejs_B* 1ejt_B* 1eju_B* 1ejv_B* 1a5m_B* 1ejw_B* 1ejx_B* 4epb_B* 4epd_B* 4epe_B* 1fwa_B* 1fwb_B* 1fwc_B* 1fwd_B* ...
Probab=34.99 E-value=61 Score=25.11 Aligned_cols=50 Identities=18% Similarity=0.192 Sum_probs=30.3
Q ss_pred eeEEEEEEEEeccCCCee----EEEE---------EecCCceEEEEEcC--eEEEeeCCcEEEEEEE
Q 044126 238 FTIKFPRTVTNIGLPNST----YKAG---------ILQNSKISVNVVPE--VLSFRSLNEKKSFIVT 289 (333)
Q Consensus 238 ~~~t~~rtvtNvg~~~~t----Y~~~---------v~~~~g~~v~v~P~--~l~~~~~g~~~~~~Vt 289 (333)
+..+++.+|+|+|+.+.. |+.- .+..-|..+.+ |+ .+.| .+|+++++++.
T Consensus 18 gr~~~~l~V~NtGDRPIQVGSHyHF~E~N~aL~FDR~~A~G~RLdI-pAGTavRF-EPG~~r~V~LV 82 (101)
T 4ep8_B 18 GRATCRVVVENHGDRPIQVGSHYHFAEVNPALKFDRQQAAGYRLNI-PAGTAVRF-EPGQKREVELV 82 (101)
T ss_dssp TCCEEEEEEEECSSSCEEEETTSCGGGSCTTEESCTTTTTTEEECS-STTCEEEE-CTTCEEEEEEE
T ss_pred CCCEEEEEEEeCCCcceEEccccChhHcCcceeecHhhccCceecc-cCCCeEee-CCCCeEEEEEE
Confidence 456788999999987542 1110 00112555555 43 3677 78999988763
No 67
>1ni7_A ER75, hypothetical protein YGDK; RD-structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Escherichia coli} SCOP: d.224.1.1
Probab=34.77 E-value=30 Score=28.95 Aligned_cols=29 Identities=14% Similarity=0.152 Sum_probs=24.8
Q ss_pred CccchHHHHHHHHHHHHhhCCCCCHHHHHH
Q 044126 113 GTSMACPHAAGVAAYVKSFHPDWSPSAIKS 142 (333)
Q Consensus 113 GTSmAaP~VAG~aALl~~~~p~~sp~~ik~ 142 (333)
|-| =|++|-|++|||...+-..+|++|.+
T Consensus 81 adS-DA~IvkGL~AlL~~~~~G~tp~eIl~ 109 (155)
T 1ni7_A 81 GDS-EGRIVRGLLAVLLTAVEGKTAAELQA 109 (155)
T ss_dssp EEE-SSHHHHHHHHHHHHHTTTCCHHHHHH
T ss_pred eCC-ccHHHHHHHHHHHHHHcCCCHHHHHh
Confidence 444 27899999999999999999999854
No 68
>2co7_B SAFB chaperone, putative fimbriae assembly chaperone; pilus subunit, adhesion, strand complementation, pathogenesis, fibril protein; 1.8A {Salmonella typhimurium} SCOP: b.1.11.1 b.7.2.1 PDB: 2co6_B
Probab=34.20 E-value=1.8e+02 Score=25.21 Aligned_cols=59 Identities=15% Similarity=0.176 Sum_probs=39.4
Q ss_pred eEEEEEEEEeccCCCeeEEEEEecC---CceEEEEEcCeEEEeeCCcEEEEEEEEEeecCCCC
Q 044126 239 TIKFPRTVTNIGLPNSTYKAGILQN---SKISVNVVPEVLSFRSLNEKKSFIVTVTGKGLASG 298 (333)
Q Consensus 239 ~~t~~rtvtNvg~~~~tY~~~v~~~---~g~~v~v~P~~l~~~~~g~~~~~~Vt~~~~~~~~~ 298 (333)
....+.+|+|.++....-++-++.. ...-+.++|..+++ .+++++.++|.......+.+
T Consensus 27 ~k~~sl~l~N~~~~p~LvQsWv~~~~~~~~~pfivtPPl~rl-~p~~~q~lRI~~~~~~lP~D 88 (221)
T 2co7_B 27 TAGATLSVSNPQNYPILVQSSVKAADKSSPAPFLVMPPLFRL-EANQQSQLRIVRTGGDMPTD 88 (221)
T ss_dssp SSCEEEEEECCSSSCEEEEEEEEETTSSSBCSEEEESSEEEE-CTTCEEEEEEEECCCCCCSS
T ss_pred CCEEEEEEEcCCCCcEEEEEEEecCCCCccCCEEEeCCEEEE-CCCCceEEEEEECCCCCCCC
Confidence 3456677888886544444444432 12347789999999 89999999998766444433
No 69
>2l0d_A Cell surface protein; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Methanosarcina acetivorans}
Probab=33.42 E-value=1.7e+02 Score=22.82 Aligned_cols=25 Identities=16% Similarity=0.315 Sum_probs=17.9
Q ss_pred eeEEEEEEEEeccCCC-eeEEEEEec
Q 044126 238 FTIKFPRTVTNIGLPN-STYKAGILQ 262 (333)
Q Consensus 238 ~~~t~~rtvtNvg~~~-~tY~~~v~~ 262 (333)
...+++.+|+|.|... ..+++....
T Consensus 19 ~~~ti~atVkN~G~~~a~~~~V~ly~ 44 (114)
T 2l0d_A 19 TVNTMTATIENQGNKDSTSFNVSLLV 44 (114)
T ss_dssp SEEEEEEEEEECSSSCBCCEEEEEEE
T ss_pred CeEEEEEEEEECCCCCCCCEEEEEEE
Confidence 6789999999999743 345555543
No 70
>1klf_A FIMC chaperone, chaperone protein FIMC; adhesin-chaperone complex, mannose-bound, chaperone/adhesin complex complex; HET: MAN; 2.79A {Escherichia coli} SCOP: b.1.11.1 b.7.2.1 PDB: 1kiu_A* 3rfz_C 1qun_A 1bf8_A 1ze3_C 3bwu_C 3jwn_C
Probab=32.95 E-value=2.3e+02 Score=24.20 Aligned_cols=86 Identities=10% Similarity=0.026 Sum_probs=52.2
Q ss_pred eEEEEEEEEeccCC-CeeEEEEEecC---CceEEEEEcCeEEEeeCCcEEEEEEEE-EeecCCCCC-eEEEEEEEEc---
Q 044126 239 TIKFPRTVTNIGLP-NSTYKAGILQN---SKISVNVVPEVLSFRSLNEKKSFIVTV-TGKGLASGS-IVSAALVWFD--- 309 (333)
Q Consensus 239 ~~t~~rtvtNvg~~-~~tY~~~v~~~---~g~~v~v~P~~l~~~~~g~~~~~~Vt~-~~~~~~~~~-~~~G~i~~~~--- 309 (333)
....+.+|+|.++. ...-++-++.. ...-+.++|..+++ .+++++.++|.. .....+.+. -.| ||.+.+
T Consensus 15 ~k~~sl~l~N~~~~~p~LvQsWi~~~~~~~~~pfivtPPl~rl-~p~~~q~lRI~~~~~~~lP~DrEslf-~lnv~eIPp 92 (205)
T 1klf_A 15 QKQVQLAVTNNDENSTYLIQSWVENADGVKDGRFIVTPPLFAM-KGKKENTLRILDATNNQLPQDRESLF-WMNVKAIPS 92 (205)
T ss_dssp CSEEEEEEEECCSSCCEEEEEEEEETTSCCCSSEEEESSEEEE-CSSEEEEEEEEECSCSCSCSSSCEEE-EEEEEEECC
T ss_pred CcEEEEEEEcCCCCCcEEEEEEEecCCCCccCCEEEcCCeEEE-CCCCceEEEEEecCCCCCCCCceEEE-EEEeEecCC
Confidence 45667888998865 44444444432 12347789999999 789999999987 543334332 222 333321
Q ss_pred --C----Cce------EEeeEEEEeeccc
Q 044126 310 --G----SRI------VRSPIVVHSQGLQ 326 (333)
Q Consensus 310 --~----~~~------vr~P~~v~~~~~~ 326 (333)
. .+. -|+++-+++..+.
T Consensus 93 ~~~~~~~~n~lqia~r~riKlFyRP~~l~ 121 (205)
T 1klf_A 93 MDKSKLTENTLQLAIISRIKLYYRPAKLA 121 (205)
T ss_dssp CCTTSTTSCEEEEEEEEEEEEEEECTTCS
T ss_pred CCccccCCceEEEEeeeeeeEEEcccccC
Confidence 1 222 3777777777654
No 71
>3g0m_A Cysteine desulfuration protein SUFE; YNHA, csgid, national I of allergy and infectious diseases, niaid, hydrolase, struc genomics; 1.76A {Salmonella typhimurium LT2} SCOP: d.224.1.1 PDB: 1mzg_A
Probab=29.69 E-value=29 Score=28.52 Aligned_cols=33 Identities=18% Similarity=0.116 Sum_probs=27.1
Q ss_pred EEeCCccchHHHHHHHHHHHHhhCCCCCHHHHHH
Q 044126 109 NIISGTSMACPHAAGVAAYVKSFHPDWSPSAIKS 142 (333)
Q Consensus 109 ~~~sGTSmAaP~VAG~aALl~~~~p~~sp~~ik~ 142 (333)
..+.|-|= |++|-|++|||.+.+-..+|++|.+
T Consensus 70 l~f~adSD-A~IvkGl~alL~~~~~G~tp~eIl~ 102 (141)
T 3g0m_A 70 IELQGDSD-AAIVKGLMAVVFILYHQMTAQDIVH 102 (141)
T ss_dssp EEEEEEES-SHHHHHHHHHHHHHHTTCBHHHHHH
T ss_pred EEEEecCc-cHHHHHHHHHHHHHHcCCCHHHHHh
Confidence 44556563 7899999999999999999999853
No 72
>4ubp_B Protein (urease (chain B)); bacillus pasteurii, nickel, acetohydroxamic acid, metalloenzyme, hydrolase; HET: KCX; 1.55A {Sporosarcina pasteurii} SCOP: b.85.3.1 PDB: 1s3t_B* 3ubp_B* 1ie7_B* 1ubp_B* 2ubp_B*
Probab=28.79 E-value=82 Score=25.35 Aligned_cols=49 Identities=18% Similarity=0.058 Sum_probs=30.1
Q ss_pred eeEEEEEEEEeccCCCee----EEEEEec----------CCceEEEEEcC--eEEEeeCCcEEEEEEE
Q 044126 238 FTIKFPRTVTNIGLPNST----YKAGILQ----------NSKISVNVVPE--VLSFRSLNEKKSFIVT 289 (333)
Q Consensus 238 ~~~t~~rtvtNvg~~~~t----Y~~~v~~----------~~g~~v~v~P~--~l~~~~~g~~~~~~Vt 289 (333)
+..+++.+|+|+|+.+.. |+.- +. .-|..+.+ |+ .+.| .+|+++++++.
T Consensus 24 gr~~~~l~V~NtGDRPIQVGSHyHF~-E~N~aL~FDR~~A~G~RLdI-pAGTavRF-EPG~~k~V~LV 88 (126)
T 4ubp_B 24 GREKTTIRVSNTGDRPIQVGSHIHFV-EVNKELLFDRAEGIGRRLNI-PSGTAARF-EPGEEMEVELT 88 (126)
T ss_dssp TSCEEEEEEEECSSSCEEEETTSCGG-GSCTTEESCGGGGTTEEECS-CTTCEEEE-CTTCEEEEEEE
T ss_pred CCcEEEEEEEeCCCCCEEEccccchh-hcCchhhccHhhhcCccccc-cCCCeEee-CCCCeEEEEEE
Confidence 456788999999987542 1110 11 11555555 43 3677 78999988764
No 73
>4ac7_B Urease subunit beta; hydrolase, bacillus pasteurii; HET: CXM KCX FLC; 1.50A {Sporosarcina pasteurii} PDB: 1s3t_B* 3ubp_B* 1ie7_B* 4ubp_B* 1ubp_B* 2ubp_B*
Probab=28.79 E-value=82 Score=25.35 Aligned_cols=49 Identities=18% Similarity=0.058 Sum_probs=30.1
Q ss_pred eeEEEEEEEEeccCCCee----EEEEEec----------CCceEEEEEcC--eEEEeeCCcEEEEEEE
Q 044126 238 FTIKFPRTVTNIGLPNST----YKAGILQ----------NSKISVNVVPE--VLSFRSLNEKKSFIVT 289 (333)
Q Consensus 238 ~~~t~~rtvtNvg~~~~t----Y~~~v~~----------~~g~~v~v~P~--~l~~~~~g~~~~~~Vt 289 (333)
+..+++.+|+|+|+.+.. |+.- +. .-|..+.+ |+ .+.| .+|+++++++.
T Consensus 24 gr~~~~l~V~NtGDRPIQVGSHyHF~-E~N~aL~FDR~~A~G~RLdI-pAGTavRF-EPG~~k~V~LV 88 (126)
T 4ac7_B 24 GREKTTIRVSNTGDRPIQVGSHIHFV-EVNKELLFDRAEGIGRRLNI-PSGTAARF-EPGEEMEVELT 88 (126)
T ss_dssp TSCEEEEEEEECSSSCEEEETTSCGG-GSCTTEESCGGGGTTEEECS-CTTCEEEE-CTTCEEEEEEE
T ss_pred CCcEEEEEEEeCCCCCEEEccccchh-hcCchhhccHhhhcCccccc-cCCCeEee-CCCCeEEEEEE
Confidence 456788999999987542 1110 11 11555555 43 3677 78999988764
No 74
>3lyw_A YBBR family protein; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 1.90A {Desulfitobacterium hafniense} PDB: 2kpu_A 2l5n_A
Probab=28.56 E-value=50 Score=24.97 Aligned_cols=38 Identities=11% Similarity=0.207 Sum_probs=28.7
Q ss_pred EEEEEEEEeccCCCeeEEEEEecCCceEE-EEEcCeEEE
Q 044126 240 IKFPRTVTNIGLPNSTYKAGILQNSKISV-NVVPEVLSF 277 (333)
Q Consensus 240 ~t~~rtvtNvg~~~~tY~~~v~~~~g~~v-~v~P~~l~~ 277 (333)
.....-+.++.++..+|.+.+..|.|+++ .++|+.+++
T Consensus 43 i~A~VDLsg~~~G~~~~~V~v~~P~G~~lv~vsP~~V~~ 81 (90)
T 3lyw_A 43 LFAYVDLSGSEPGEHDYEVKVEPIPNIKIVEISPRVVTL 81 (90)
T ss_dssp CEEEEECTTCCSEEEEEECEECCCTTEEEEEEESSEEEE
T ss_pred EEEEEECcCCCCCcEeEEEEEECCCCCEEEEEccceEEE
Confidence 44455667777777788888999999774 578988776
No 75
>2hr0_B Complement C3 alpha' chain; complement component C3B, immune system; HET: THC; 2.26A {Homo sapiens} PDB: 2icf_B* 2wii_B* 2win_B* 3g6j_B 3l5n_B* 2a73_B* 2i07_B* 2xwj_B* 2xwb_B* 2a74_C* 2ice_C* 2qki_C* 3l3o_F* 3nms_C* 3nsa_C* 3ohx_C* 3t4a_C 2ice_B* 3l3o_B* 3nms_B* ...
Probab=27.95 E-value=1.5e+02 Score=31.24 Aligned_cols=68 Identities=10% Similarity=0.087 Sum_probs=48.9
Q ss_pred CCCCCCCceeeeccCCCceeEEEEEEEEeccC-CCeeEEEEEecCCceEEEE-----EcCeEEEeeCCcEEEEEEEEEee
Q 044126 220 PKDLNYPSMAAQVSSGESFTIKFPRTVTNIGL-PNSTYKAGILQNSKISVNV-----VPEVLSFRSLNEKKSFIVTVTGK 293 (333)
Q Consensus 220 ~~~lN~pSi~~~~~~~~~~~~t~~rtvtNvg~-~~~tY~~~v~~~~g~~v~v-----~P~~l~~~~~g~~~~~~Vt~~~~ 293 (333)
..++|+|-+... + ....+..+|.|..+ .....++.+....++.+.- ...++++ ++++++++.+.+.+.
T Consensus 82 ~v~~~LP~~v~~---G--D~~~i~~~v~N~~~~~~~~v~v~l~~~~~~~~~~~~~~~~~~~v~l-~~~~~~~v~f~i~~~ 155 (915)
T 2hr0_B 82 FIDLRLPYSVVR---N--EQVEIRAVLYNYRQNQELKVRVELLHNPAFCSLATTKRRHQQTVTI-PPKSSLSVPYVIVPL 155 (915)
T ss_dssp EEEEECCSEEET---T--CCEEEEEEEEECCSSCCEEEEEEECCCTTEECSCCSSSCEEEEEEE-CTTEEEEEEEEEEEC
T ss_pred EEEccCCCEEec---C--cEEEEEEEEEcCCCCeeEEEEEEEecCCceEeecCCCCcceeEEEE-CCCCeEEEEEEEEEC
Confidence 455788855432 1 46888899999999 8889999888776665432 1345677 788888888888763
No 76
>3hrz_B Cobra venom factor; serine protease, glycosilated, multi-domain, complement SYST convertase, complement alternate pathway; HET: NAG P6G; 2.20A {Naja kaouthia} PDB: 3frp_G* 3hs0_B*
Probab=27.73 E-value=2.5e+02 Score=24.67 Aligned_cols=67 Identities=9% Similarity=0.073 Sum_probs=42.5
Q ss_pred CCCCCCCceeeeccCCCceeEEEEEEEEeccCCCeeEEEEEecCCceEEEEE-----cCeEEEeeCCcEEEEEEEEEe
Q 044126 220 PKDLNYPSMAAQVSSGESFTIKFPRTVTNIGLPNSTYKAGILQNSKISVNVV-----PEVLSFRSLNEKKSFIVTVTG 292 (333)
Q Consensus 220 ~~~lN~pSi~~~~~~~~~~~~t~~rtvtNvg~~~~tY~~~v~~~~g~~v~v~-----P~~l~~~~~g~~~~~~Vt~~~ 292 (333)
..++|+|.... .+ ....+..+|.|..+.....++......++..... ..++.+ ++++++++...+.+
T Consensus 83 fv~~~LP~sv~---rG--E~~~l~~~V~Ny~~~~~~v~V~l~~~~~~~~~~~~~~~~~~~v~v-~a~~~~~v~f~i~p 154 (252)
T 3hrz_B 83 FIDLQMPYSVV---KN--EQVEIRAILHNYVNEDIYVRVELLYNPAFCSASTKGQRYRQQFPI-KALSSRAVPFVIVP 154 (252)
T ss_dssp EEEECCCSCEE---TT--CCEEEEEEEEECSSSCEEEEEEECCCTTEEESCCSSCCEEEEEEE-CTTEEEEEEEEEEE
T ss_pred EEEcCCCcEEe---eC--CEEEEEEEEEcccCceEEEEEEEEcCCceEeecCCCCceEEEEEE-CCCCeEEEEEEEEe
Confidence 34578886543 22 4678889999998887777777766555543211 123555 66777777666655
No 77
>3e9t_A Na/Ca exchange protein; CBD1, CALX, membrane, transmembrane, membrane protein; 1.60A {Drosophila melanogaster} SCOP: b.1.27.0
Probab=27.73 E-value=51 Score=25.57 Aligned_cols=42 Identities=14% Similarity=0.108 Sum_probs=21.4
Q ss_pred ceEEEEEcCeEEEeeCCcE-EEEEEEEEeecCCCCCeEEEEEEEE
Q 044126 265 KISVNVVPEVLSFRSLNEK-KSFIVTVTGKGLASGSIVSAALVWF 308 (333)
Q Consensus 265 g~~v~v~P~~l~~~~~g~~-~~~~Vt~~~~~~~~~~~~~G~i~~~ 308 (333)
|........+|+| ++||+ ++++|.+-.+......-.| .|.+.
T Consensus 49 g~Dy~~~~g~l~F-~~Get~k~i~V~I~dD~~~E~~E~F-~v~L~ 91 (114)
T 3e9t_A 49 GTDFVGRKGLLSF-PPGVDEQRFRIEVIDDDVFEEDECF-YIRLF 91 (114)
T ss_dssp TTTBCCCEEEEEE-CTTCCEEEEEEEBCCCSSCCCCEEE-EEEEE
T ss_pred CCCceEcceEEEE-eCCcEEEEEEEEEEcCCCccCCEEE-EEEEE
Confidence 4333333467899 66764 5665555444433333333 34444
No 78
>3ndz_E Endoglucanase D; cellotriose, xylanase, carbohydrate binding D glucanase, hydrolase; HET: CT3; 2.08A {Clostridium cellulovorans} PDB: 3ndy_E*
Probab=26.65 E-value=2.2e+02 Score=21.88 Aligned_cols=30 Identities=10% Similarity=0.046 Sum_probs=23.0
Q ss_pred EEEEEEEEeccCCCe-eEEEEEecCCceEEE
Q 044126 240 IKFPRTVTNIGLPNS-TYKAGILQNSKISVN 269 (333)
Q Consensus 240 ~t~~rtvtNvg~~~~-tY~~~v~~~~g~~v~ 269 (333)
.+.+.+|+|.|..+. -|+++...|.|.+|+
T Consensus 17 f~~~vtVtN~g~~~i~gWtv~~~~p~g~~it 47 (107)
T 3ndz_E 17 ASVNVTIKNNGTTPINGWTLKWTMPINQTIT 47 (107)
T ss_dssp EEEEEEEEECSSSCEESCEEEEECCTTEEEE
T ss_pred EEEEEEEEeCCCCcccCcEEEEEcCCCCEEe
Confidence 566789999986554 599999988776654
No 79
>4acq_A Alpha-2-macroglobulin; hydrolase inhibitor, proteinase inhibitor, irreversible PROT inhibitor, conformational change, blood plasma inhibitor; HET: MEQ NAG MAN; 4.30A {Homo sapiens}
Probab=25.98 E-value=2.5e+02 Score=31.40 Aligned_cols=67 Identities=16% Similarity=0.092 Sum_probs=48.7
Q ss_pred CCCCCCceeeeccCCCceeEEEEEEEEeccCCCeeEEEEEecCCceEEEEE---cCeEEEeeCCcEEEEEEEEEee
Q 044126 221 KDLNYPSMAAQVSSGESFTIKFPRTVTNIGLPNSTYKAGILQNSKISVNVV---PEVLSFRSLNEKKSFIVTVTGK 293 (333)
Q Consensus 221 ~~lN~pSi~~~~~~~~~~~~t~~rtvtNvg~~~~tY~~~v~~~~g~~v~v~---P~~l~~~~~g~~~~~~Vt~~~~ 293 (333)
.++++|-+... + ....+..+|.|..+....+++.+....++.+.-. ..++.+ ++++++++.+.+.+.
T Consensus 771 v~~~LP~sv~r---G--E~~~l~~~V~N~~~~~~~v~V~l~~~~~~~~~~~~~~~~~v~l-~~~~~~~v~f~v~p~ 840 (1451)
T 4acq_A 771 VELTMPYSVIR---G--EAFTLKATVLNYLPKCIRVSVQLEASPAFLAVPVEKEQAPHCI-CANGRQTVSWAVTPK 840 (1451)
T ss_dssp EEEECCSEEES---S--SCEEEEEEEEECSSSCEEEEEEECCCTTEEEEESCSCCCCEEE-CTTEEEEEEEEEEEC
T ss_pred EEccCCceEec---C--CEEEEEEEEEeccCccEEEEEEEEcCCCeEeecCCCCceEEEE-CCCCeEEEEEEEEEC
Confidence 34566654332 1 4678889999999888899999888777776432 346788 788888888887764
No 80
>1l4i_A SFAE protein; periplasmic chaperone, immunoglobulin fold; 2.20A {Escherichia coli} SCOP: b.1.11.1 b.7.2.1
Probab=25.97 E-value=2.7e+02 Score=23.72 Aligned_cols=86 Identities=13% Similarity=0.111 Sum_probs=50.2
Q ss_pred eEEEEEEEEeccC-CCeeEEEEEecC---CceEEEEEcCeEEEeeCCcEEEEEEE-EEeecCCCCC-eEEEEEEEEc---
Q 044126 239 TIKFPRTVTNIGL-PNSTYKAGILQN---SKISVNVVPEVLSFRSLNEKKSFIVT-VTGKGLASGS-IVSAALVWFD--- 309 (333)
Q Consensus 239 ~~t~~rtvtNvg~-~~~tY~~~v~~~---~g~~v~v~P~~l~~~~~g~~~~~~Vt-~~~~~~~~~~-~~~G~i~~~~--- 309 (333)
....+.+|+|.++ ....-++-++.. ....+.++|..+++ .+++++.++|. ......+.+. -+| ||.+.+
T Consensus 15 ~k~~sl~l~N~~~~~p~LvQsWv~~~~~~~~~pfivtPPl~rl-~p~~~q~lRI~~~~~~~lP~DrEslf-~lnv~eIPp 92 (206)
T 1l4i_A 15 QKQVQLAVTNNDDKSSYLIQSWIENAEGKKDARFVITPPLFSM-QGKKENTLRIIDATNGQMPEDRESLF-WVNVKAIPA 92 (206)
T ss_dssp CSEEEEEEEECCTTCEEEEEEEEEETTSCBCSSEEEESSEEEE-ESSEEEEEEEEECCTTCSCSSSCEEE-EEEEEEEEC
T ss_pred CcEEEEEEEeCCCCccEEEEEEEecCCCCccCCEEEcCCeEEE-CCCCceEEEEEecCCCCCCCCceEEE-EEEeecCCC
Confidence 4566788899875 433333334321 12347789999999 78999999998 4332334332 222 333321
Q ss_pred --C----Cc------eEEeeEEEEeeccc
Q 044126 310 --G----SR------IVRSPIVVHSQGLQ 326 (333)
Q Consensus 310 --~----~~------~vr~P~~v~~~~~~ 326 (333)
. .+ .-|+++-+++..+.
T Consensus 93 ~~~~~~~~n~lqia~r~riKlFyRP~~l~ 121 (206)
T 1l4i_A 93 MDKAKTGENYLQFAIVSRIKLLYRPQGLV 121 (206)
T ss_dssp CC--------CCCEEEEEEEEEEECTTCS
T ss_pred CcccccCCceEEEEhhheeeEEEeccccC
Confidence 1 11 34788888877664
No 81
>2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus}
Probab=25.96 E-value=38 Score=26.85 Aligned_cols=36 Identities=11% Similarity=0.078 Sum_probs=19.7
Q ss_pred cCCCeeEEEEE--ecCCceEEEEEcCeEEEeeCCcEEEEEEE
Q 044126 250 GLPNSTYKAGI--LQNSKISVNVVPEVLSFRSLNEKKSFIVT 289 (333)
Q Consensus 250 g~~~~tY~~~v--~~~~g~~v~v~P~~l~~~~~g~~~~~~Vt 289 (333)
|....++++.+ ... + ....|..+++ ++|++.+|+++
T Consensus 13 ~~~~~~~~V~v~~~~~-~--~~F~p~~i~v-~~G~~V~~~~~ 50 (139)
T 2aan_A 13 GSGSGPVTIEIGSKGE-E--LAFDKTELTV-SAGQTVTIRFK 50 (139)
T ss_dssp ----CCEEEEEEBCTT-S--SSBSCSEEEE-CTTCEEEEEEE
T ss_pred CCCCcCEEEEEEecCC-c--cEEcCCeEEE-CCCCEEEEEEE
Confidence 44455666666 222 2 3346888888 77877766553
No 82
>3gfu_C Chaperone protein FAEE; immunoglobulin like fold, chaperone, fimbrium, immunoglobulin domain, periplasm, plasmid, cell adhesion; 1.99A {Escherichia coli} PDB: 3gew_B 3f65_A 3f6i_A 3f6l_A
Probab=24.05 E-value=3.6e+02 Score=23.50 Aligned_cols=86 Identities=15% Similarity=0.086 Sum_probs=49.8
Q ss_pred eEEEEEEEEeccCC-CeeEEEEEecC----CceEEEEEcCeEEEeeCCcEEEEEEEEEeecCCCCC-eEEEEEEEEc---
Q 044126 239 TIKFPRTVTNIGLP-NSTYKAGILQN----SKISVNVVPEVLSFRSLNEKKSFIVTVTGKGLASGS-IVSAALVWFD--- 309 (333)
Q Consensus 239 ~~t~~rtvtNvg~~-~~tY~~~v~~~----~g~~v~v~P~~l~~~~~g~~~~~~Vt~~~~~~~~~~-~~~G~i~~~~--- 309 (333)
....+.+|+|.++. ...-++-++.. ....+.++|..+++ .+|+.+.++|.......+.+. -+| ||.+.+
T Consensus 15 ~k~~sl~l~N~~~~~p~LvQsWid~~~~~~~~~pfivtPPlfRl-ep~~~q~lRIi~~~~~LP~DRESlf-~lnv~eIPp 92 (224)
T 3gfu_C 15 KDALTITVTNNDKERTFGGQAWVDNIVEKDTRPTFVVTPSFFKV-KPNGQQTLRIIMASDHLPKDKESVY-WLNLQDIPP 92 (224)
T ss_dssp SSCEEEEEEECCSSCCEEEEEEEEESSCCSCSCSEEEESSEEEE-CTTCEEEEEEEECSCCCCSSSCEEE-EEEEEEECC
T ss_pred CceEEEEEEeCCCCccEEEEEEEecCCCCcccCCEEEcCCeEEE-CCCCceEEEEEECCCCCCCCceEEE-EEEeecCCC
Confidence 34566788887753 21122223321 12337889999999 889999999976654334332 222 333331
Q ss_pred --CC------ceEEeeEEEEeeccc
Q 044126 310 --GS------RIVRSPIVVHSQGLQ 326 (333)
Q Consensus 310 --~~------~~vr~P~~v~~~~~~ 326 (333)
.. -.-|+++.+++..+.
T Consensus 93 ~~~~n~Lqiair~rIKLFyRP~~L~ 117 (224)
T 3gfu_C 93 ALEGSGIAVALRTKLKLFYRPKALL 117 (224)
T ss_dssp CCSSSBCCEEEEEEEEEEEECGGGT
T ss_pred CCCCCeEEEEEEEEeeEEEcccccc
Confidence 11 223688888887654
No 83
>3erx_A Pseudoazurin; copper protein, high-resolution, E transport, metal-binding, transport; 1.25A {Paracoccus pantotrophus} SCOP: b.6.1.1 PDB: 1adw_A
Probab=20.75 E-value=1.4e+02 Score=23.41 Aligned_cols=22 Identities=14% Similarity=0.223 Sum_probs=15.3
Q ss_pred EEEEEcCeEEEeeCCcEEEEEEE
Q 044126 267 SVNVVPEVLSFRSLNEKKSFIVT 289 (333)
Q Consensus 267 ~v~v~P~~l~~~~~g~~~~~~Vt 289 (333)
....+|..|++ ++|++.+|..+
T Consensus 15 ~~~F~P~~i~V-~~GdtV~f~~~ 36 (123)
T 3erx_A 15 AMVFEPAFVRA-EPGDVINFVPT 36 (123)
T ss_dssp EEEEESSEEEE-CTTEEEEEEES
T ss_pred cEeEeCCEEEE-CCCCEEEEEEC
Confidence 46667888887 67777666553
Done!