Query 044130
Match_columns 565
No_of_seqs 136 out of 571
Neff 6.7
Searched_HMMs 46136
Date Fri Mar 29 11:44:24 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/044130.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/044130hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02620 indole-3-acetic acid- 100.0 3E-132 7E-137 1089.2 50.3 549 10-565 20-604 (612)
2 PLN02247 indole-3-acetic acid- 100.0 4E-129 9E-134 1067.1 50.2 550 11-565 10-601 (606)
3 PLN02249 indole-3-acetic acid- 100.0 1E-123 3E-128 1032.1 51.5 540 9-565 18-593 (597)
4 PF03321 GH3: GH3 auxin-respon 100.0 4E-110 8E-115 921.7 38.1 479 14-544 2-527 (528)
5 COG1541 PaaK Coenzyme F390 syn 99.7 3.3E-15 7.2E-20 159.5 22.7 209 266-538 212-433 (438)
6 TIGR03335 F390_ftsA coenzyme F 99.5 1.3E-13 2.8E-18 150.5 17.4 207 266-516 206-431 (445)
7 TIGR02155 PA_CoA_ligase phenyl 99.5 1.5E-12 3.3E-17 140.6 20.5 204 266-516 197-410 (422)
8 TIGR02304 aden_form_hyp probab 99.3 1.5E-09 3.3E-14 117.9 25.1 142 267-458 215-375 (430)
9 PRK00174 acetyl-CoA synthetase 98.4 6.2E-05 1.4E-09 85.7 24.4 128 266-426 369-527 (637)
10 PTZ00237 acetyl-CoA synthetase 98.3 2.8E-05 6.2E-10 89.0 20.2 128 266-426 382-536 (647)
11 PRK06060 acyl-CoA synthetase; 98.3 3E-05 6.4E-10 89.5 19.0 129 266-426 262-409 (705)
12 TIGR02188 Ac_CoA_lig_AcsA acet 98.3 0.00019 4.2E-09 81.5 24.9 130 266-426 360-519 (625)
13 PRK03584 acetoacetyl-CoA synth 98.3 0.00018 4E-09 82.2 24.4 230 264-549 383-648 (655)
14 PRK07514 malonyl-CoA synthase; 98.2 7.2E-05 1.6E-09 82.0 19.6 133 259-426 267-421 (504)
15 PRK09274 peptide synthase; Pro 98.2 0.00012 2.7E-09 81.4 20.1 140 266-427 290-465 (552)
16 PRK05605 long-chain-fatty-acid 98.2 5.2E-05 1.1E-09 84.9 17.1 130 266-426 338-489 (573)
17 PRK10524 prpE propionyl-CoA sy 98.2 0.0002 4.4E-09 81.4 22.0 129 266-426 357-517 (629)
18 PRK04319 acetyl-CoA synthetase 98.1 0.00013 2.7E-09 82.0 19.5 132 260-427 322-477 (570)
19 PRK09088 acyl-CoA synthetase; 98.1 1.4E-05 3.1E-10 87.4 11.6 130 266-426 254-405 (488)
20 PRK13295 cyclohexanecarboxylat 98.1 2.6E-05 5.6E-10 87.0 13.7 131 260-426 311-463 (547)
21 PRK06334 long chain fatty acid 98.1 2.4E-05 5.1E-10 87.5 13.2 131 266-427 301-455 (539)
22 PRK05677 long-chain-fatty-acid 98.1 9E-05 2E-09 83.0 17.6 128 266-426 328-477 (562)
23 PRK08974 long-chain-fatty-acid 98.1 0.00012 2.7E-09 81.7 18.1 128 266-426 327-476 (560)
24 PRK07867 acyl-CoA synthetase; 98.1 2.7E-05 5.9E-10 86.7 12.6 132 266-426 269-425 (529)
25 TIGR01734 D-ala-DACP-lig D-ala 98.1 0.00022 4.7E-09 78.1 19.4 62 361-427 337-418 (502)
26 PRK07788 acyl-CoA synthetase; 98.1 0.00011 2.3E-09 82.0 17.1 128 266-426 325-471 (549)
27 PLN02574 4-coumarate--CoA liga 98.1 0.00018 3.8E-09 80.6 19.0 130 266-426 321-474 (560)
28 PRK07786 long-chain-fatty-acid 98.0 3.9E-05 8.4E-10 85.4 12.5 129 266-426 292-443 (542)
29 TIGR01217 ac_ac_CoA_syn acetoa 98.0 0.0004 8.7E-09 79.6 20.8 61 363-427 461-544 (652)
30 PRK05852 acyl-CoA synthetase; 98.0 0.00033 7.3E-09 77.7 19.4 134 259-426 293-452 (534)
31 TIGR03205 pimA dicarboxylate-- 98.0 5.3E-05 1.2E-09 84.2 12.6 130 266-426 314-465 (541)
32 TIGR01733 AA-adenyl-dom amino 98.0 6.3E-05 1.4E-09 79.8 12.7 129 266-426 236-399 (408)
33 PRK07529 AMP-binding domain pr 98.0 0.00031 6.6E-09 80.2 19.0 133 266-426 335-489 (632)
34 PRK07768 long-chain-fatty-acid 98.0 0.00042 9.2E-09 77.1 19.3 63 361-427 381-459 (545)
35 PRK06187 long-chain-fatty-acid 98.0 0.00065 1.4E-08 74.4 20.3 132 259-426 279-439 (521)
36 PRK06145 acyl-CoA synthetase; 98.0 5.7E-05 1.2E-09 82.7 11.9 130 266-427 266-418 (497)
37 PRK06155 crotonobetaine/carnit 97.9 7.7E-05 1.7E-09 83.3 13.1 128 266-426 296-444 (542)
38 PRK04813 D-alanine--poly(phosp 97.9 7.5E-05 1.6E-09 81.6 12.6 61 361-426 339-419 (503)
39 PLN02654 acetate-CoA ligase 97.9 0.0021 4.7E-08 73.9 25.0 159 361-549 475-662 (666)
40 TIGR02316 propion_prpE propion 97.9 0.00094 2E-08 76.1 21.9 62 361-426 432-516 (628)
41 TIGR03208 cyc_hxne_CoA_lg cycl 97.9 5.9E-05 1.3E-09 83.8 11.8 62 361-426 385-461 (538)
42 PRK07638 acyl-CoA synthetase; 97.9 9.6E-05 2.1E-09 80.9 13.1 129 266-426 256-405 (487)
43 PRK07059 Long-chain-fatty-acid 97.9 5.5E-05 1.2E-09 84.4 11.3 128 266-426 329-479 (557)
44 PRK06164 acyl-CoA synthetase; 97.9 0.00044 9.6E-09 76.7 18.1 62 361-426 372-450 (540)
45 PRK12406 long-chain-fatty-acid 97.9 0.00071 1.5E-08 74.5 19.5 128 266-426 273-423 (509)
46 PRK06839 acyl-CoA synthetase; 97.9 0.00033 7.1E-09 76.5 16.6 127 266-426 266-415 (496)
47 PRK08633 2-acyl-glycerophospho 97.9 0.0002 4.3E-09 86.7 16.2 133 260-427 897-1064(1146)
48 PRK08314 long-chain-fatty-acid 97.9 0.00016 3.4E-09 80.3 14.2 133 260-427 304-461 (546)
49 PRK13383 acyl-CoA synthetase; 97.9 0.00056 1.2E-08 75.6 18.1 128 266-426 294-440 (516)
50 PLN02246 4-coumarate--CoA liga 97.9 0.00073 1.6E-08 75.1 18.9 130 266-426 300-456 (537)
51 PRK08316 acyl-CoA synthetase; 97.9 0.0001 2.2E-09 80.9 12.0 129 266-426 288-439 (523)
52 PRK12583 acyl-CoA synthetase; 97.9 0.00047 1E-08 76.7 17.4 129 266-426 319-472 (558)
53 TIGR02275 DHB_AMP_lig 2,3-dihy 97.8 0.00013 2.8E-09 80.9 12.4 129 266-426 301-452 (527)
54 PLN02330 4-coumarate--CoA liga 97.8 8.5E-05 1.8E-09 82.8 10.6 130 266-426 305-461 (546)
55 PRK06710 long-chain-fatty-acid 97.8 8.9E-05 1.9E-09 82.9 10.7 130 266-427 325-476 (563)
56 PRK13382 acyl-CoA synthetase; 97.8 0.00074 1.6E-08 75.3 18.0 128 266-426 314-460 (537)
57 PRK08751 putative long-chain f 97.8 0.00012 2.7E-09 81.6 11.4 129 266-427 331-482 (560)
58 PRK13390 acyl-CoA synthetase; 97.8 0.00097 2.1E-08 73.3 18.4 62 361-426 343-423 (501)
59 PRK07656 long-chain-fatty-acid 97.8 0.0002 4.3E-09 78.5 12.6 129 266-426 283-436 (513)
60 PRK07470 acyl-CoA synthetase; 97.8 0.00018 3.8E-09 79.7 12.2 62 361-426 361-438 (528)
61 PRK12492 long-chain-fatty-acid 97.7 0.00026 5.7E-09 79.2 12.8 128 266-426 335-485 (562)
62 PLN02614 long-chain acyl-CoA s 97.7 0.00014 3E-09 83.8 10.7 132 266-426 388-541 (666)
63 PRK13391 acyl-CoA synthetase; 97.7 0.0011 2.5E-08 73.0 17.6 127 266-426 277-426 (511)
64 PLN03051 acyl-activating enzym 97.7 0.00029 6.3E-09 77.8 12.7 44 379-426 358-401 (499)
65 PLN02860 o-succinylbenzoate-Co 97.7 0.00032 6.9E-09 78.7 12.8 60 363-426 382-458 (563)
66 PRK13388 acyl-CoA synthetase; 97.7 0.00029 6.3E-09 78.6 12.3 130 276-426 278-424 (540)
67 PRK08315 AMP-binding domain pr 97.7 0.0019 4.1E-08 71.9 18.7 130 266-426 317-471 (559)
68 TIGR03098 ligase_PEP_1 acyl-Co 97.7 0.0026 5.6E-08 69.9 19.2 129 266-426 276-438 (515)
69 PRK05850 acyl-CoA synthetase; 97.6 0.0023 4.9E-08 71.9 18.7 63 360-427 391-481 (578)
70 PRK07445 O-succinylbenzoic aci 97.6 0.00017 3.7E-09 79.0 9.3 60 363-426 298-368 (452)
71 PRK10946 entE enterobactin syn 97.6 0.00033 7.2E-09 77.9 11.7 132 260-426 299-453 (536)
72 PRK07868 acyl-CoA synthetase; 97.6 0.0013 2.9E-08 79.2 17.3 142 266-426 722-880 (994)
73 PLN02736 long-chain acyl-CoA s 97.6 0.00031 6.8E-09 80.4 11.3 132 266-426 378-532 (651)
74 PRK10252 entF enterobactin syn 97.6 0.00044 9.6E-09 85.0 12.9 63 361-427 797-882 (1296)
75 PRK08308 acyl-CoA synthetase; 97.6 0.00024 5.2E-09 76.4 9.0 58 363-426 278-335 (414)
76 TIGR03443 alpha_am_amid L-amin 97.6 0.00029 6.3E-09 87.4 11.0 44 379-426 679-722 (1389)
77 PRK07787 acyl-CoA synthetase; 97.6 0.00073 1.6E-08 73.8 12.8 129 266-426 243-395 (471)
78 PTZ00342 acyl-CoA synthetase; 97.5 0.00096 2.1E-08 77.9 14.3 130 266-426 463-615 (746)
79 PLN03052 acetate--CoA ligase; 97.5 0.0051 1.1E-07 71.7 20.2 44 379-426 590-633 (728)
80 PRK08276 long-chain-fatty-acid 97.5 0.005 1.1E-07 67.6 19.1 127 266-426 264-413 (502)
81 PLN02861 long-chain-fatty-acid 97.5 0.00044 9.6E-09 79.4 10.9 60 363-426 462-538 (660)
82 PRK08279 long-chain-acyl-CoA s 97.5 0.00084 1.8E-08 75.8 12.9 146 260-426 313-483 (600)
83 PRK12476 putative fatty-acid-- 97.5 0.0028 6.1E-08 71.9 17.2 64 360-428 423-521 (612)
84 PRK07798 acyl-CoA synthetase; 97.5 0.0009 1.9E-08 73.6 12.8 130 266-426 298-452 (533)
85 COG0365 Acs Acyl-coenzyme A sy 97.5 0.0068 1.5E-07 67.9 19.5 184 266-510 292-501 (528)
86 PRK07769 long-chain-fatty-acid 97.5 0.0005 1.1E-08 78.3 10.9 63 360-427 412-508 (631)
87 PRK06178 acyl-CoA synthetase; 97.5 0.0045 9.8E-08 69.3 18.2 62 361-426 409-486 (567)
88 PRK09192 acyl-CoA synthetase; 97.5 0.0042 9.1E-08 69.9 18.0 62 361-427 406-483 (579)
89 PRK07824 O-succinylbenzoic aci 97.5 0.0029 6.2E-08 66.5 15.5 43 379-426 235-277 (358)
90 COG0318 CaiC Acyl-CoA syntheta 97.5 0.00082 1.8E-08 75.3 11.8 130 266-427 293-446 (534)
91 PRK08008 caiC putative crotono 97.5 0.00082 1.8E-08 74.1 11.7 62 361-426 361-442 (517)
92 PLN02387 long-chain-fatty-acid 97.5 0.00072 1.6E-08 78.2 11.6 132 266-426 422-580 (696)
93 PRK03640 O-succinylbenzoic aci 97.5 0.00079 1.7E-08 73.3 11.4 62 361-426 327-404 (483)
94 PLN03102 acyl-activating enzym 97.4 0.00068 1.5E-08 76.5 10.8 59 364-426 390-464 (579)
95 PRK08043 bifunctional acyl-[ac 97.4 0.0012 2.6E-08 76.6 13.0 45 379-427 592-636 (718)
96 PRK05857 acyl-CoA synthetase; 97.4 0.0012 2.6E-08 73.7 12.4 65 358-426 366-446 (540)
97 KOG1175 Acyl-CoA synthetase [L 97.4 0.01 2.2E-07 67.2 19.6 143 380-551 477-624 (626)
98 PRK07008 long-chain-fatty-acid 97.4 0.001 2.2E-08 74.1 11.6 58 365-426 383-453 (539)
99 TIGR02262 benz_CoA_lig benzoat 97.4 0.0012 2.5E-08 72.8 11.7 128 266-426 280-428 (508)
100 PRK12467 peptide synthase; Pro 97.4 0.0018 3.9E-08 88.1 15.6 128 267-426 774-934 (3956)
101 PRK06188 acyl-CoA synthetase; 97.4 0.0011 2.4E-08 73.2 11.5 62 361-426 360-437 (524)
102 PRK06814 acylglycerophosphoeth 97.3 0.0016 3.5E-08 79.3 13.3 45 379-427 1011-1055(1140)
103 PRK12467 peptide synthase; Pro 97.3 0.0012 2.6E-08 89.7 13.0 129 266-426 3353-3515(3956)
104 PLN02430 long-chain-fatty-acid 97.3 0.0017 3.8E-08 74.6 12.5 60 363-426 462-538 (660)
105 PRK05691 peptide synthase; Val 97.3 0.0032 6.8E-08 86.5 16.8 62 361-426 4061-4146(4334)
106 PRK05851 long-chain-fatty-acid 97.3 0.0015 3.2E-08 72.7 11.0 62 361-427 367-440 (525)
107 PRK05620 long-chain-fatty-acid 97.3 0.0016 3.5E-08 73.1 11.5 43 380-426 432-474 (576)
108 PF00501 AMP-binding: AMP-bind 97.3 0.0016 3.5E-08 69.4 10.7 120 259-411 275-417 (417)
109 PRK05691 peptide synthase; Val 97.2 0.0045 9.7E-08 85.0 16.7 129 266-426 1390-1549(4334)
110 PRK06087 short chain acyl-CoA 97.2 0.0018 3.9E-08 72.1 10.6 62 361-426 376-454 (547)
111 PRK12316 peptide synthase; Pro 97.2 0.0013 2.8E-08 91.2 10.8 129 266-426 772-930 (5163)
112 PRK12582 acyl-CoA synthetase; 97.2 0.0035 7.6E-08 71.4 12.7 60 362-421 419-496 (624)
113 PRK06018 putative acyl-CoA syn 97.1 0.0027 5.9E-08 70.7 11.2 58 365-426 383-454 (542)
114 TIGR01923 menE O-succinylbenzo 97.1 0.0026 5.6E-08 68.3 10.4 58 365-426 291-364 (436)
115 COG1021 EntE Peptide arylation 97.1 0.00091 2E-08 70.9 6.5 128 266-426 307-458 (542)
116 PRK12316 peptide synthase; Pro 97.0 0.0028 6.1E-08 88.0 12.1 129 266-426 3313-3468(5163)
117 COG1022 FAA1 Long-chain acyl-C 97.0 0.006 1.3E-07 69.4 11.9 132 266-446 355-506 (613)
118 PRK08180 feruloyl-CoA synthase 96.9 0.0053 1.2E-07 69.8 10.9 46 380-425 442-490 (614)
119 PTZ00216 acyl-CoA synthetase; 96.9 0.0045 9.7E-08 71.7 10.1 60 363-426 504-581 (700)
120 PRK08162 acyl-CoA synthetase; 96.8 0.01 2.2E-07 66.0 12.2 57 366-426 388-460 (545)
121 KOG1176 Acyl-CoA synthetase [L 96.8 0.011 2.3E-07 66.5 11.8 120 275-426 313-452 (537)
122 PRK09029 O-succinylbenzoic aci 96.7 0.0054 1.2E-07 66.6 9.2 43 379-426 333-375 (458)
123 PLN02479 acetate-CoA ligase 96.7 0.01 2.2E-07 66.6 10.9 58 365-426 401-474 (567)
124 KOG1179 Very long-chain acyl-C 96.4 0.11 2.4E-06 57.7 16.5 223 275-537 369-623 (649)
125 TIGR02372 4_coum_CoA_lig 4-cou 96.2 0.016 3.4E-07 62.6 8.5 43 380-426 277-319 (386)
126 PF14535 AMP-binding_C_2: AMP- 95.2 0.023 5.1E-07 48.9 4.1 84 412-516 1-84 (96)
127 KOG1177 Long chain fatty acid 91.0 1.2 2.7E-05 48.9 9.6 63 360-426 426-505 (596)
128 KOG1256 Long-chain acyl-CoA sy 89.6 2 4.3E-05 49.5 10.2 136 257-426 415-572 (691)
129 COG1020 EntF Non-ribosomal pep 86.4 4.1 8.9E-05 46.4 10.5 59 363-425 564-639 (642)
130 KOG1180 Acyl-CoA synthetase [L 85.7 9.3 0.0002 43.0 12.0 160 266-448 404-574 (678)
131 PRK09188 serine/threonine prot 67.0 7.8 0.00017 41.7 4.8 39 379-426 210-251 (365)
132 PF07311 Dodecin: Dodecin; In 49.2 62 0.0013 26.2 6.0 49 413-462 13-62 (66)
133 PTZ00189 60S ribosomal protein 47.8 14 0.0003 35.0 2.3 36 377-412 31-69 (160)
134 PF11454 DUF3016: Protein of u 45.5 35 0.00076 31.8 4.6 42 361-404 47-94 (141)
135 PRK04306 50S ribosomal protein 43.3 19 0.0004 31.4 2.3 36 377-412 32-70 (98)
136 PLN00190 60S ribosomal protein 42.2 19 0.0004 34.1 2.3 36 377-412 31-69 (158)
137 TIGR03335 F390_ftsA coenzyme F 40.2 28 0.00061 38.1 3.8 49 23-72 12-68 (445)
138 COG2139 RPL21A Ribosomal prote 35.1 28 0.00061 30.1 2.1 36 377-412 30-68 (98)
139 PF04443 LuxE: Acyl-protein sy 35.0 1.3E+02 0.0028 32.4 7.7 105 276-416 243-359 (365)
140 cd03483 MutL_Trans_MLH1 MutL_T 34.5 86 0.0019 28.3 5.4 46 383-430 29-74 (127)
141 COG2026 RelE Cytotoxic transla 30.2 83 0.0018 26.7 4.2 31 367-397 43-73 (90)
142 PF12690 BsuPI: Intracellular 28.5 37 0.00081 28.4 1.8 23 361-383 20-44 (82)
143 PF09926 DUF2158: Uncharacteri 24.2 66 0.0014 24.8 2.3 18 380-400 1-18 (53)
144 cd04473 S1_RecJ_like S1_RecJ_l 23.0 1.1E+02 0.0024 24.8 3.6 20 355-374 8-27 (77)
145 PF01157 Ribosomal_L21e: Ribos 23.0 20 0.00042 31.4 -0.9 35 377-411 30-67 (99)
146 cd04931 ACT_PAH ACT domain of 22.6 3.4E+02 0.0074 23.0 6.6 41 417-462 25-65 (90)
147 COG2457 Uncharacterized conser 22.1 1.3E+02 0.0027 29.6 4.2 34 358-393 7-48 (199)
148 PF08838 DUF1811: Protein of u 20.3 89 0.0019 27.4 2.5 37 355-391 49-95 (102)
149 smart00739 KOW KOW (Kyprides, 20.2 76 0.0016 20.1 1.7 26 380-412 2-27 (28)
150 COG0077 PheA Prephenate dehydr 20.2 7.8E+02 0.017 25.6 9.8 70 388-462 167-245 (279)
No 1
>PLN02620 indole-3-acetic acid-amido synthetase
Probab=100.00 E-value=3.3e-132 Score=1089.25 Aligned_cols=549 Identities=56% Similarity=1.003 Sum_probs=506.9
Q ss_pred ccHHHHHHHHHHHhcHHHHHHHHHHHHHHHcCCChHHHhh-hCCCCChhhhhhcCCCccCCcchHHHHHHHhcCCCCCcc
Q 044130 10 KGEEALKEIEKLTAKADEVQNNLLREILIRNGETEYLRKY-LRGSKDVSDFKRCVPVSTYKNIYPYIQRIAISGEDSSLI 88 (565)
Q Consensus 10 ~~~~~~~~~e~~~~~~~~~Q~~~L~~iL~~n~~T~ygk~~-f~~i~~~e~Fr~~VPl~~Yed~~pyIeR~~~~Ge~~~vl 88 (565)
.+++.++.+|+.++||.++|+++|++||++|++|+|||+| |++|+|+++||++|||++|||++|||+||+ +||.++||
T Consensus 20 ~~~~~l~~ie~~t~~~~~vQ~~vL~~IL~~n~~Teyg~~~~f~~i~~~~~F~~~VPv~~Yedl~pyI~Ri~-~Ge~s~vL 98 (612)
T PLN02620 20 KNKKALQFIEDVTSNADEVQKRVLEEILSRNAHVEYLQRHGLNGRTDRETFKKVMPVITYEDIQPDINRIA-NGDTSPIL 98 (612)
T ss_pred chHHHHHHHHHHHhCHHHHHHHHHHHHHHhcccChhHHhcCCCCCCCHHHHHHhCCCccHHHhHHHHHHHH-cCCCCCcc
Confidence 3467789999999999999999999999999999999999 999999999999999999999999999999 99988999
Q ss_pred CCcccchhhh---------hccCCC-------------------------ccccceeeccccccccCCCCcccccccccc
Q 044130 89 SGHPITEMLC---------RYICGL-------------------------DEGKAMYFYFVKAEMSTPSGLPTRTVLTSY 134 (565)
Q Consensus 89 ~~~pi~~f~~---------k~~P~~-------------------------~~gk~l~~~~~~~~~~t~~Gip~g~~s~~~ 134 (565)
|++||.+|++ |+||++ ..||.||+++.+.+.+|++|||+|++++++
T Consensus 99 ~~~pi~~F~~SSGTT~g~~K~IP~t~e~l~~~~~~~~~~~~~~~~~~p~l~~Gk~~~~~~~~~~~~T~~Gip~g~~st~~ 178 (612)
T PLN02620 99 CSKPISEFLTSSGTSGGERKLMPTIEEELGRRSLLYSLLMPVMSQFVPGLEKGKGMYFLFIKSEAKTPGGLVARPVLTSY 178 (612)
T ss_pred CCCChhhhhhcCCCCCCceeeeecCHHHHHHHHHHHHHHHHHHHhhCCCcccCcEEEEEecccCccCCCCcccccccchh
Confidence 9999999999 666654 348999999999999999999999999999
Q ss_pred cccccccccCCCCCCcccCCcceeecCCchhhHHHHHHhhhhcCcceeEEeeecHHHHHHHHHHHHHhHHHHHHHHHccc
Q 044130 135 YKSKHFKCRTRDPYNDFTSPDPAILCNDSNQSMYCQLLAGLIHRHQVLRLGAVFASALLRAISFLERNWFQLCNDIRSGR 214 (565)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~P~~v~~~~d~~~~~Y~~ll~~L~~~~~v~~is~~~~~~l~~~~~~le~~w~el~~dI~~Gt 214 (565)
|.|..|+.++.++...|++|.++++++|+.+++||||||||.++++|..++++|+++|++++++||++|++||+||++|+
T Consensus 179 y~s~~f~~~~~~~~~~~~sP~ev~~~~D~~qs~Y~~LLcgL~~~~~v~~v~svfa~~ll~a~~~Le~~w~~L~~DI~~G~ 258 (612)
T PLN02620 179 YKSSHFKDRPYDPYTNYTSPNETILCPDSYQSMYSQMLCGLCQHKEVLRVGAVFASGFIRAIRFLEKHWTLLCRDIRTGT 258 (612)
T ss_pred hhhhhhhhcccccccceeCcHHhccCCCHHHHHHHHHHHHhhcchhhceEEeechHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 99999998888777789999999999999999999999999998999888999999999999999999999999999999
Q ss_pred CCCCCCCccchhhhhhhcCCCChhHHHHHHHHhcCCCccccccccCCCCceEEEEEecchhhhHHHHHHhcCCCCceecc
Q 044130 215 LDLTITDPGCRSSTLSLLTSPNPTLADEIEEICSRPSWKGILCQLWPRAKYIEAVVTGSMAQYIPSLEYYSAGKLPLVGT 294 (565)
Q Consensus 215 ~~~~i~~~~~r~~l~~~L~~p~p~~A~~L~~~~~~~~~~gi~~~lWP~l~~i~~~~~G~~~~y~~~l~~~~g~~~~~~~~ 294 (565)
++++++++++|.++.+.|+ |||++|++|+.+|++++|+||+++|||||++|+||++|+|++|++.|+.|+|+ +|+++.
T Consensus 259 ls~~itd~~~R~av~~~L~-p~pelA~~i~~~c~~~~w~gii~rLWP~lk~I~~~~tGsm~~Y~p~L~~y~gg-lpl~~~ 336 (612)
T PLN02620 259 IDSQITDPSVREAVMKILK-PDPKLADFVEAECRKESWQGIITRLWPNTKYVDVIVTGTMSQYIPTLDYYSNG-LPLVCT 336 (612)
T ss_pred CCccCCCHHHHHHHHhhcC-CCHHHHHHHHHHhccccccCcHHHhCCCCcEEEEECCCCHHHHHHHHHHHcCC-Cccccc
Confidence 9999999999999999997 99999999999999989999999999999999999999999999999999998 999999
Q ss_pred cccccceeeeecCCCCCCCCCceeeecCCceeEEeeeCCCCCCccccccccc-cccCCCCceeeccCcccCCeEEEEecc
Q 044130 295 MYASSECYFGVNLKPLSNPADVSFTLLPNMCYFEFLPLGGENGTLLSMEFNE-EEEVPNDKLVDLGHVRVGHYYELVVTT 373 (565)
Q Consensus 295 ~y~aSEg~~gi~~~~~~~~~~~~~~l~p~~~ffEFip~~~~~~~~~~~~~~~-~~~~~~~~~v~l~eve~G~~YelViTt 373 (565)
+|+||||+||||++|.|+|+..+|+|+|+.+||||||+++.+.....+-+-+ .++.+++++|+++|||+|++|||||||
T Consensus 337 ~Y~ASE~~~ginl~P~~~p~~~sy~L~p~~~yFEFip~~~~~~~~~~~~~~~~~~~~~~~~~v~l~ev~~G~~YelvvTt 416 (612)
T PLN02620 337 MYASSECYFGVNLNPLCKPSEVSYTLIPTMAYFEFLPVHRNNGVTNSISLPKSLNEKEQQELVDLVDVKLGQEYELVVTT 416 (612)
T ss_pred cccccceEEEeccCCCCCcccceeeecCCcEEEEEeeccCcccccccccccccccccccCccccHHHccCCCeEEEEEEe
Confidence 9999999999999999999999999999999999999885321000000000 012345779999999999999999999
Q ss_pred ccceeeeecCCEEEEeeeeCCCCEEEEEeecCceeeeeecccCHHHHHHHHHHHHhhcccCCCeEEeEEEeecCCCCCce
Q 044130 374 FAGLNRYRIGDVLQVTGFYNRAPQFRFICRRNVVLSIDNDKTNEEDLHKSVTIAKNLLEPYSALLVEYTSYADTSTVPGH 453 (565)
Q Consensus 374 ~~GLyRYriGDvV~v~gf~~~~P~i~F~gR~~~~l~i~GEkl~e~~v~~av~~~~~~l~~~g~~l~~f~~~~d~~~~p~~ 453 (565)
.+||||||+||||+|+||||++|+|+|+||.+.++||+|||++|++|+.||.+|...|.+.+++|+|||+++|.++.|||
T Consensus 417 ~~GLyRYrlGDvv~V~Gf~n~~P~~~Fv~R~~~~lsi~gEK~tE~~l~~Av~~a~~~l~~~~~~l~dyts~~d~~~~Pgh 496 (612)
T PLN02620 417 YAGLYRYRVGDVLRVAGFKNKAPQFSFICRKNVVLSIDSDKTDEVELQNAVKNAVNHLVPFDASLTEYTSYADTSTIPGH 496 (612)
T ss_pred cCceEEEecCCEEEEeeecCCCceEEEEeecCceeecccccCCHHHHHHHHHHHHHhhcccCceeeeEEeccccCCCCCc
Confidence 99999999999999999999999999999999999999999999999999999998886678999999999999899999
Q ss_pred eEEEEEEEecCCCCCCCChHHHHHHHHHHHHHHhChHHHHhhccCCccCCeEEEEeCCCcHHHHHHHHHhcCCCCCCCCC
Q 044130 454 YVLYWEIQIVDSPALPLDHQKVLEECCIAVEEQLDYVYRRCRSHDKSVGPLEIRVVEPGTFETLMDLLVSQGGSINQYKT 533 (565)
Q Consensus 454 Y~l~~e~e~~~~~~~~~~~~~~l~~~~~~ld~~Ln~~Y~~~R~~~g~l~p~~v~~v~~gtf~~~~~~~~~~G~~~~Q~K~ 533 (565)
|+||||+...+. .+++ .+++++||..||++||.+|+.+|..+++|+|++|++|++|||+.++++++++|++.+|||+
T Consensus 497 Yvl~~El~~~~~--~~~~-~~~l~~cc~~lE~~Ln~~Yr~~R~~~~sIgPLeirvv~~GtF~~l~~~~~~~G~s~~QyK~ 573 (612)
T PLN02620 497 YVLFWELCLNGS--TPIP-PSVFEDCCLTIEESLNSVYRQGRVSDKSIGPLEIKIVEPGTFDKLMDYAISLGASINQYKT 573 (612)
T ss_pred eEEEEEEecCCC--CCCC-HHHHHHHHHHHHHHhCHHHHHHHhcCCcCCCcEEEEeCCChHHHHHHHHHHcCCccccccC
Confidence 999999952221 1234 6789999999999999999999976556999999999999999999999999999999999
Q ss_pred CcccCCChHHHHHHhccccceeccCCCCCCCC
Q 044130 534 PRCIKSNNAALMLLDSHVKDSFFSPRDPKWIP 565 (565)
Q Consensus 534 Pr~~~~~~~~~~~L~~~~~~~~~s~~~~~~~~ 565 (565)
|||++ +++++++|+++|+++|||+++|.|.|
T Consensus 574 Pr~v~-~~~~~~~l~~~v~~~~~s~~~~~~~~ 604 (612)
T PLN02620 574 PRCVK-FAPIIELLNSRVVSNYFSPKCPKWVP 604 (612)
T ss_pred ceEec-CHHHHHHHHhhhheeeccccCCCCCc
Confidence 99999 99999999999999999999999987
No 2
>PLN02247 indole-3-acetic acid-amido synthetase
Probab=100.00 E-value=4.1e-129 Score=1067.14 Aligned_cols=550 Identities=62% Similarity=1.040 Sum_probs=501.0
Q ss_pred cHHHHHHHHHHHhcHHHHHHHHHHHHHHHcCCChHHHhhhCCCCChhhhhhcCCCccCCcchHHHHHHHhcCCCCCccCC
Q 044130 11 GEEALKEIEKLTAKADEVQNNLLREILIRNGETEYLRKYLRGSKDVSDFKRCVPVSTYKNIYPYIQRIAISGEDSSLISG 90 (565)
Q Consensus 11 ~~~~~~~~e~~~~~~~~~Q~~~L~~iL~~n~~T~ygk~~f~~i~~~e~Fr~~VPl~~Yed~~pyIeR~~~~Ge~~~vl~~ 90 (565)
+++.++.+|+.++||.++|+++|++||++|++|+|||+|+.+|+++++||++|||++|||++|||+||+ +||.++++++
T Consensus 10 ~~~~~~~~e~~t~~~~~~Q~~vL~~iL~~n~~Teyg~~~~~~i~~~e~Fk~~VPv~~Yedl~pyI~Ri~-~Ge~~~llt~ 88 (606)
T PLN02247 10 NEAGLKLLEDLTTNACQIQQQVLEEILTQNAGTEYLRSFLDGESDKQSFKNKVPVVNYEDIKPCIERIA-NGESSSIISA 88 (606)
T ss_pred hHHHHHHHHHHHhCHHHHHHHHHHHHHHhcccChhhhhcCccCCCHHHHHHhCCCccHHHhHHHHHHHH-cCCCCceeCC
Confidence 477899999999999999999999999999999999999449999999999999999999999999999 9998666779
Q ss_pred cccchhhh---------hccCCC-------------------------ccccceeeccccccccCCCCcccccccccccc
Q 044130 91 HPITEMLC---------RYICGL-------------------------DEGKAMYFYFVKAEMSTPSGLPTRTVLTSYYK 136 (565)
Q Consensus 91 ~pi~~f~~---------k~~P~~-------------------------~~gk~l~~~~~~~~~~t~~Gip~g~~s~~~~~ 136 (565)
+||.+|++ |+||++ ..||.||++|...+.+|++|||+|++++.|++
T Consensus 89 ~pi~~F~~SSGTT~g~~K~IP~t~e~l~~~~~~~~l~~~~~~~~~p~l~~Gk~~~~~~~~~~~~T~~Gip~g~~~t~y~~ 168 (606)
T PLN02247 89 QPITELLTSSGTSGGQPKLMPSTAEELDRKTFFYNLLVPVMNKYVDGLDQGKGMYLLFIKPEISTPSGLMARPVLTSYYK 168 (606)
T ss_pred CCcceeeccCCCCCCceeEeeccHHHHHHHHHHHHHHHHHHHhcCCCcccCcEEEEEecCcCccCCCCcccccccchhhc
Confidence 99999999 666664 34889999999999999999999999999999
Q ss_pred cccccccCCCCCCcccCCcceeecCCchhhHHHHHHhhhhcCcceeEEeeecHHHHHHHHHHHHHhHHHHHHHHHcccCC
Q 044130 137 SKHFKCRTRDPYNDFTSPDPAILCNDSNQSMYCQLLAGLIHRHQVLRLGAVFASALLRAISFLERNWFQLCNDIRSGRLD 216 (565)
Q Consensus 137 ~~~~~~~~~~~~~~~~~P~~v~~~~d~~~~~Y~~ll~~L~~~~~v~~is~~~~~~l~~~~~~le~~w~el~~dI~~Gt~~ 216 (565)
+..|+.++.++...|++|.+++++.|+++++||||||||.+++++..++++|++++++++++||++|++||+||++|+++
T Consensus 169 s~~f~~~~~~~~~~~~sP~ev~~~~D~~qs~Y~~LLcgL~~~~~vl~v~svfa~s~l~a~~~Le~~we~L~~DI~~G~ls 248 (606)
T PLN02247 169 SSNFRNRPFNRYNVYTSPDETILCQDSKQSMYCQLLCGLVQRDEVLRVGAVFASAFLRAIKFLEDHWKELCSNIRTGCVS 248 (606)
T ss_pred cccccccccccccceeCcHHhhcCCCHHHHHHHHHHHHhhccccccEEEEeccHHHHHHHHHHHHHHHHHHHHHhcCCcc
Confidence 99888887765568999999999999999999999999998888888888888888999999999999999999999999
Q ss_pred CCCCCccchhhhhhhcCCCChhHHHHHHHHhcCCCccccccccCCCCceEEEEEecchhhhHHHHHHhcCCCCceecccc
Q 044130 217 LTITDPGCRSSTLSLLTSPNPTLADEIEEICSRPSWKGILCQLWPRAKYIEAVVTGSMAQYIPSLEYYSAGKLPLVGTMY 296 (565)
Q Consensus 217 ~~i~~~~~r~~l~~~L~~p~p~~A~~L~~~~~~~~~~gi~~~lWP~l~~i~~~~~G~~~~y~~~l~~~~g~~~~~~~~~y 296 (565)
++++++++|.++.+.|.+|||++|++|+.+|.+++|.|++++|||||++|+||++|+|++|+++|+.|+|+ +|+++.+|
T Consensus 249 ~~it~p~~R~a~~~~l~~p~peLA~~l~~~c~~~~w~gi~~rLWP~lk~I~~~~tGsm~~Y~~~L~~y~gg-lpl~s~~Y 327 (606)
T PLN02247 249 DWITDPSCRNAVSSILSKPNSELADLIESECSGKSWEGIIKRLWPRTKYIEVIVTGSMAQYIPTLEFYSGG-LPLVSTMY 327 (606)
T ss_pred cccCCHHHHHHHhhcccCCCHHHHHHHHHHhcccCccccHHHhCCCCcEEEEECCCCHHHHHHHHHHHcCC-Cceecccc
Confidence 99999999999999997799999999999999988999999999999999999999999999999999998 99999999
Q ss_pred cccceeeeecCCCCCCCCCceeeecCCceeEEeeeCCCCCCcccccccccc--cc-----CCCCceeeccCcccCCeEEE
Q 044130 297 ASSECYFGVNLKPLSNPADVSFTLLPNMCYFEFLPLGGENGTLLSMEFNEE--EE-----VPNDKLVDLGHVRVGHYYEL 369 (565)
Q Consensus 297 ~aSEg~~gi~~~~~~~~~~~~~~l~p~~~ffEFip~~~~~~~~~~~~~~~~--~~-----~~~~~~v~l~eve~G~~Yel 369 (565)
+||||+||||++|.|+|+..+|+|+|+.+||||||+++.+.+..+ .+..+ +. .+++++|+++|||+|++|||
T Consensus 328 ~sSE~~~ginl~p~~~p~~~sy~L~p~~~yFEFip~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~v~l~evk~G~~Yel 406 (606)
T PLN02247 328 ASSECYFGINLKPLSDPSDVSYTLLPNMAYFEFLPVDKNNGEVIH-FVQCNGTDDDDDALKEDLEIVDLVDVKVGHYYEL 406 (606)
T ss_pred cccceEEEeccCcCCCccCCceeecCCcEEEEEeecCCCcccccc-cccccccccccccccccCceecHHHccCCCeEEE
Confidence 999999999999999999999999999999999998864311000 00000 00 23567999999999999999
Q ss_pred EeccccceeeeecCCEEEEeeeeCCCCEEEEEeecCceeeeeecccCHHHHHHHHHHHHhhcccCCCeEEeEEEeecCCC
Q 044130 370 VVTTFAGLNRYRIGDVLQVTGFYNRAPQFRFICRRNVVLSIDNDKTNEEDLHKSVTIAKNLLEPYSALLVEYTSYADTST 449 (565)
Q Consensus 370 ViTt~~GLyRYriGDvV~v~gf~~~~P~i~F~gR~~~~l~i~GEkl~e~~v~~av~~~~~~l~~~g~~l~~f~~~~d~~~ 449 (565)
||||.+||||||+||||+|+||||++|+|+|+||.+.++||+|||++|+++++||.+|...+.+.++.++||++++|.++
T Consensus 407 VvTt~~GLYRYrlGDvv~V~GF~n~~P~~~Fv~R~~~vlsi~gEK~tE~~l~~Av~~a~~~l~~~~~~l~d~ts~~d~~~ 486 (606)
T PLN02247 407 VVTTFTGLYRYRVGDILMVTGFYNNAPQFRFVQRRNVVLSIDTDKTNEEDLLKAVTQAKLLLEPLGFLLTEYTSYADTSS 486 (606)
T ss_pred EEEecCceEEEecCCEEEEeeecCCCceEEEEecCCceeecccccCCHHHHHHHHHHHHHhhcccCeeeeeeecccccCC
Confidence 99999999999999999999999999999999999999999999999999999999999877667899999999999889
Q ss_pred CCceeEEEEEEEecCCC-CCCCChHHHHHHHHHHHHHHhChHHHHhhccCCccCCeEEEEeCCCcHHHHHHHHHhcCCCC
Q 044130 450 VPGHYVLYWEIQIVDSP-ALPLDHQKVLEECCIAVEEQLDYVYRRCRSHDKSVGPLEIRVVEPGTFETLMDLLVSQGGSI 528 (565)
Q Consensus 450 ~p~~Y~l~~e~e~~~~~-~~~~~~~~~l~~~~~~ld~~Ln~~Y~~~R~~~g~l~p~~v~~v~~gtf~~~~~~~~~~G~~~ 528 (565)
.||||+||||+...+.. ..+.+ ...+++||..||++||.+|+.+|..+|+|+|++|++|++|||++++++++++|++.
T Consensus 487 ~PghYvlf~El~~~~~~~~~~~~-~~~l~~cc~~lE~~Ln~~Yr~~R~~~~~igPLeirvv~~GtF~~l~~~~~~~G~s~ 565 (606)
T PLN02247 487 IPGHYVLFWELKTRGSNDPPELD-PKIMEQCCSTVEESLDSVYRRCRKRDKSIGPLEIRVVKHGTFDALMDFCVSQGSSV 565 (606)
T ss_pred CCCceEEEEEeecCCCCccccch-HHHHHHHHHHHHHHhhHHHHHHhhccCcCCCcEEEEeCCChHHHHHHHHHHcCCCc
Confidence 99999999999631110 00122 56899999999999999999999765699999999999999999999999999999
Q ss_pred CCCCCCcccCCChHHHHHHhccccceeccCCCCCCCC
Q 044130 529 NQYKTPRCIKSNNAALMLLDSHVKDSFFSPRDPKWIP 565 (565)
Q Consensus 529 ~Q~K~Pr~~~~~~~~~~~L~~~~~~~~~s~~~~~~~~ 565 (565)
+|||+|||++ +++++++|+++||++|||+++|.|.|
T Consensus 566 ~Q~K~Pr~v~-~~~~~~~l~~~v~~~~~s~~~~~~~~ 601 (606)
T PLN02247 566 NQYKTPRCIK-SEEALKILDSRVIGRFFSKRVPFWEP 601 (606)
T ss_pred ccccCceEec-CHHHHHHHHhhhheeeccccCCCCCc
Confidence 9999999999 99999999999999999999999987
No 3
>PLN02249 indole-3-acetic acid-amido synthetase
Probab=100.00 E-value=1.2e-123 Score=1032.15 Aligned_cols=540 Identities=53% Similarity=0.933 Sum_probs=500.5
Q ss_pred cccHHHHHHHHHHHhcHHHHHHHHHHHHHHHcCCChHHHhh-hCCCCChhhhhhcCCCccCCcchHHHHHHHhcCCCCCc
Q 044130 9 YKGEEALKEIEKLTAKADEVQNNLLREILIRNGETEYLRKY-LRGSKDVSDFKRCVPVSTYKNIYPYIQRIAISGEDSSL 87 (565)
Q Consensus 9 ~~~~~~~~~~e~~~~~~~~~Q~~~L~~iL~~n~~T~ygk~~-f~~i~~~e~Fr~~VPl~~Yed~~pyIeR~~~~Ge~~~v 87 (565)
+.+++.++.+|+.++||.++|+++|++||++|++|+|||+| |++|+|+++||++|||++|||++|||+||+ +||.++|
T Consensus 18 ~~~~~~l~~~e~~t~~~~~~Q~~vL~~iL~~n~~Teyg~~~gf~~i~~~~~F~~~VPv~~Yedl~pyIeRi~-~Ge~~~v 96 (597)
T PLN02249 18 EKDVKALKFIEEMTRNPDSVQEKVLGEILSRNSNTEYLKRFDLNGAVDRKTFKSKVPVVTYEDLKTEIQRIS-NGDRSPI 96 (597)
T ss_pred CcHHHHHHHHHHHHhCHHHHHHHHHHHHHHhcccChhHHhcCCCCCCCHHHHHHhCCCccHHHhHHHHHHHH-cCCCCce
Confidence 33467789999999999999999999999999999999999 999999999999999999999999999999 9998779
Q ss_pred cCCcccchhhh---------hccCCCcc-------------------------ccceeeccccccccCCCCccccccccc
Q 044130 88 ISGHPITEMLC---------RYICGLDE-------------------------GKAMYFYFVKAEMSTPSGLPTRTVLTS 133 (565)
Q Consensus 88 l~~~pi~~f~~---------k~~P~~~~-------------------------gk~l~~~~~~~~~~t~~Gip~g~~s~~ 133 (565)
||++||.+|++ |+||++.+ ||.|++++.+.+.+|+||+|+|++++.
T Consensus 97 L~~~pi~~f~~SSGTT~g~~K~IP~T~~~l~~~~~~~~~~~~~~~~~~~~l~~Gk~l~~~~~~~~~~t~gG~p~~~~~~~ 176 (597)
T PLN02249 97 LSSHPITEFLTSSGTSAGERKLMPTIEEDIDRRQLLGSLLMPVMNLYVPGLDKGKGLYFLFVKSESKTSGGLPARPALTS 176 (597)
T ss_pred eCCCchhhhcccCCCCCCceeEEeccHHHHHHHHHHHHHHHHHHhccCCccccCcEEEEEeccccccCCCCCccCccccc
Confidence 99999999999 88888652 788999999999999999999999999
Q ss_pred ccccccccccCCCCCCcccCCcceeecCCchhhHHHHHHhhhhcCcceeEEeeecHHHHHHHHHHHHHhHHHHHHHHHcc
Q 044130 134 YYKSKHFKCRTRDPYNDFTSPDPAILCNDSNQSMYCQLLAGLIHRHQVLRLGAVFASALLRAISFLERNWFQLCNDIRSG 213 (565)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~P~~v~~~~d~~~~~Y~~ll~~L~~~~~v~~is~~~~~~l~~~~~~le~~w~el~~dI~~G 213 (565)
|+.+..|+.+.. .+.|++|.++++++|.++++||||||||..++++..|+++||+.+++++++|+++|++||+||++|
T Consensus 177 ~~~~~~f~~~~~--~~~~~~P~ev~~~~D~~~~~Y~~lL~gL~~~~~~~~i~~~~Ps~l~~~~~~l~~~weel~~dI~~g 254 (597)
T PLN02249 177 YYKSDHFRTSDY--DNVYTSPNEAILCSDSSQSMYAQMLCGLLMRHEVLRLGAVFPSGLLRAISFLQNNWKELAQDISTG 254 (597)
T ss_pred cccccccccccc--cccccCcHHhhcCCCHHHHHHHHHHHHHhhccccceEEEECcHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 888777765543 467999999999999999999999999998889999999999999999999999999999999999
Q ss_pred cCCCCCCCccchhhhhhhcCCCChhHHHHHHHHhcCCCccccccccCCCCceEEEEEecchhhhHHHHHHhcCCCCceec
Q 044130 214 RLDLTITDPGCRSSTLSLLTSPNPTLADEIEEICSRPSWKGILCQLWPRAKYIEAVVTGSMAQYIPSLEYYSAGKLPLVG 293 (565)
Q Consensus 214 t~~~~i~~~~~r~~l~~~L~~p~p~~A~~L~~~~~~~~~~gi~~~lWP~l~~i~~~~~G~~~~y~~~l~~~~g~~~~~~~ 293 (565)
+++++++++++|..+..++..|+|++|++|+++|++.+|+|++++|||||++|+||++|+|++|+++|++|+|+ +++++
T Consensus 255 ~~~~~~~~~~~~~~v~~i~g~P~~~la~~i~~~~~~~~~~gii~~lWPnl~~i~~~~~G~~~~Y~~~l~~~~g~-~~~~~ 333 (597)
T PLN02249 255 TLSSKIFDPAIKNRMSKILNKPDQELAEFLIGVCSQENWEGIITKIWPNTKYLDVIVTGAMAQYIPMLEYYSGG-LPMAS 333 (597)
T ss_pred CCcccccchHHHHHHHhhcCCCCHHHHHHHHHHhccccccccHHHhCCCCCeEEEEecCChHHHHHHHHHHcCC-Ccccc
Confidence 99999999999999999997799999999999999878999999999999999999999999999999999998 99999
Q ss_pred ccccccceeeeecCCCCCCCCCceeeecCCceeEEeeeCCCCCCccccccccccccCCCCceeeccCcccCCeEEEEecc
Q 044130 294 TMYASSECYFGVNLKPLSNPADVSFTLLPNMCYFEFLPLGGENGTLLSMEFNEEEEVPNDKLVDLGHVRVGHYYELVVTT 373 (565)
Q Consensus 294 ~~y~aSEg~~gi~~~~~~~~~~~~~~l~p~~~ffEFip~~~~~~~~~~~~~~~~~~~~~~~~v~l~eve~G~~YelViTt 373 (565)
++|+||||+||||+++.|+++..+|+|+|+++||||||.++.+. +..+++++|+++|||+|++|||||||
T Consensus 334 ~~Y~ASEg~~gi~~~~~~~p~~~~~~l~~~~~ffEFiP~~~~~~----------~~~~~~~~v~l~eVe~G~~Y~lVvTT 403 (597)
T PLN02249 334 TIYASSESYFGINLNPMCKPSEVSYTIMPNMAYFEFLPHNHDGD----------GALDETSLVELADVEVGKEYELVITT 403 (597)
T ss_pred ccccccceEEEeecCCCCCCCCcceEecCCcEEEEeeecccCCc----------ccCCCCcEecHHHcCCCCeEEEEEEc
Confidence 99999999999999999999899999999999999999875321 11245889999999999999999999
Q ss_pred ccceeeeecCCEEEEeeeeCCCCEEEEEeecCceeeeeecccCHHHHHHHHHHHHhhcccCCCeEEeEEEeecCCCCCce
Q 044130 374 FAGLNRYRIGDVLQVTGFYNRAPQFRFICRRNVVLSIDNDKTNEEDLHKSVTIAKNLLEPYSALLVEYTSYADTSTVPGH 453 (565)
Q Consensus 374 ~~GLyRYriGDvV~v~gf~~~~P~i~F~gR~~~~l~i~GEkl~e~~v~~av~~~~~~l~~~g~~l~~f~~~~d~~~~p~~ 453 (565)
++|||||++|||||||||||++|+|+|+||+++++|++|||++|+++++||.+|...+++.|+.|.||++.++.++.|+|
T Consensus 404 ~~GLyRY~iGDvVrvtgf~~~~P~i~F~gR~~~~ls~~GEKl~e~~v~~Av~~a~~~~~~~~~~v~eft~~~~~~~~p~H 483 (597)
T PLN02249 404 YAGLYRYRVGDILRVTGFHNSAPQFKFIRRKNVLLSIESDKTDEADLQKAVENASRLLAEQGTRVIEYTSYAETKTIPGH 483 (597)
T ss_pred ccceeEeecCCEEEEeeccCCCcEEEEEccCCcceecccccCCHHHHHHHHHHHHHHhhhcCceEEEeEEecCCCCCCCc
Confidence 99999999999999999999999999999999999999999999999999999877666789999999998888778999
Q ss_pred eEEEEEEE-ecCCCCCCCChHHHHHHHHHHHHHHhChHHHHhhccCCccCCeEEEEeCCCcHHHHHHHHHhcCCCCCCCC
Q 044130 454 YVLYWEIQ-IVDSPALPLDHQKVLEECCIAVEEQLDYVYRRCRSHDKSVGPLEIRVVEPGTFETLMDLLVSQGGSINQYK 532 (565)
Q Consensus 454 Y~l~~e~e-~~~~~~~~~~~~~~l~~~~~~ld~~Ln~~Y~~~R~~~g~l~p~~v~~v~~gtf~~~~~~~~~~G~~~~Q~K 532 (565)
|+||||++ + ++...+.+ .+.+++||+.++++||.+|+++|..+|+|+||+|++|++|+|..|+++++++|+++||||
T Consensus 484 yvl~wei~~~-~~~~~~~~-~~~~~~~~~~~e~~ln~~Y~~~R~~~~~L~pl~v~vv~~GtF~~~~~~~~~~G~~~gQ~K 561 (597)
T PLN02249 484 YVIYWELLGR-DQSNALPS-DEVMAKCCLEMEESLNSVYRQSRVSDKSIGPLEIRVVQNGTFEELMDYAISRGSSINQYK 561 (597)
T ss_pred eEEEEEEecc-ccccCCCC-HHHHHHHHHHHHHHhCHHHHHHHhcCCccCCeEEEEeCCchHHHHHHHHHhCCCcCCCcC
Confidence 99999994 3 21000123 668899999999999999999997656999999999999999999999999999999999
Q ss_pred CCcccCCChHHHHHHhccccceeccCCCCCCCC
Q 044130 533 TPRCIKSNNAALMLLDSHVKDSFFSPRDPKWIP 565 (565)
Q Consensus 533 ~Pr~~~~~~~~~~~L~~~~~~~~~s~~~~~~~~ 565 (565)
+|||++ +++++++|+++|+++|+|+++|+|.|
T Consensus 562 ~Prl~~-~~~~~~~l~~~~~~~~~~~~~~~~~~ 593 (597)
T PLN02249 562 VPRCVS-LTPIMELLDSRVVSAHFSPSLPHWSP 593 (597)
T ss_pred CceEeC-CHHHHHHHHhhhheeeccccCCCCCC
Confidence 999999 99999999999999999999999986
No 4
>PF03321 GH3: GH3 auxin-responsive promoter; InterPro: IPR004993 Transcription of the gene family, GH3, has been shown to be specifically induced by the plant hormone auxin. The auxin-responsive GH3 gene promoter is composed of multiple auxin response elements (AuxREs), and each AuxRE contributes incrementally to the strong auxin inducibility to the promoter.; PDB: 4EPL_A 4EQ4_B 4EWV_B 4EQL_B 4EPM_A.
Probab=100.00 E-value=3.8e-110 Score=921.68 Aligned_cols=479 Identities=38% Similarity=0.654 Sum_probs=377.4
Q ss_pred HHHHHHHHHhcHHHHHHHHHHHHHHHcCCChHHHhh-hCCCCChhh--hhhcCCCccCCcchHHHHHHHhcCCCCCccCC
Q 044130 14 ALKEIEKLTAKADEVQNNLLREILIRNGETEYLRKY-LRGSKDVSD--FKRCVPVSTYKNIYPYIQRIAISGEDSSLISG 90 (565)
Q Consensus 14 ~~~~~e~~~~~~~~~Q~~~L~~iL~~n~~T~ygk~~-f~~i~~~e~--Fr~~VPl~~Yed~~pyIeR~~~~Ge~~~vl~~ 90 (565)
.+++|++.++||+++|+++|++||++|++|+|||+| |++|+|++| ||++|||++||||+|||+||+ +||+ +|||+
T Consensus 2 ~l~~f~~~~~~~~~~Q~~~L~~iL~~n~~T~yGr~~gf~~i~s~ed~~Fr~~VPi~~Yed~~pyIeR~~-~Ge~-~vL~~ 79 (528)
T PF03321_consen 2 VLKRFEKATKNPEQVQEEVLREILRRNADTEYGRDHGFAGIRSVEDESFRKRVPITDYEDYRPYIERIA-EGEE-NVLTP 79 (528)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHCTTSHHHHCTT--S----HHHHHHHHS--BEHHHHHHHHHHHH-TT---CCTSS
T ss_pred hHHHHHHHHhCHHHHHHHHHHHHHHhhccCHhHHhcCCCCCCCcchHHHHHhCCCccHHHHHHHHHHHh-cCCC-CCCCC
Confidence 478999999999999999999999999999999999 999999999 999999999999999999999 9997 69999
Q ss_pred cccchhhh---------hccCCCcc----------------------------cc--ceeeccccccccCCCCccccccc
Q 044130 91 HPITEMLC---------RYICGLDE----------------------------GK--AMYFYFVKAEMSTPSGLPTRTVL 131 (565)
Q Consensus 91 ~pi~~f~~---------k~~P~~~~----------------------------gk--~l~~~~~~~~~~t~~Gip~g~~s 131 (565)
+|+.+|++ |+||++.. || .+.+.+.+...+|++|+|+|++|
T Consensus 80 ~~~~~f~~TSGTTg~~~K~IP~T~~~l~~~~~~~~~~~~~~~l~~~~p~~~~~gk~~~l~~~~~~~~~~t~~Gi~~g~~s 159 (528)
T PF03321_consen 80 GPPIYFALTSGTTGGKSKLIPYTKEFLKEFRRLGAIAAWLYYLYRNFPGLLFQGKSLYLSFSFAPPPLRTPGGIPIGSIS 159 (528)
T ss_dssp S--SEEEEEEEEETTEEEEEEESHHHHHHHHHHHHHHHHH--HHHHSSS--TTSE--EEEE------EE-TTS-EEE-HH
T ss_pred CCCCeEEeCCCCCCCCCceeeccHHHHHHHHHHHHHHHHHHHHHhcCcccccCCcceEEEeecCCCcccCCCCeEEeccc
Confidence 99999999 77777533 45 34444557888999999999999
Q ss_pred ccccccccccccCCCCCCcccCCcceeecCCchhhHHHHHHhhhhcCcceeEEeeecHHHHHHHHHHHHHhHHHHHHHHH
Q 044130 132 TSYYKSKHFKCRTRDPYNDFTSPDPAILCNDSNQSMYCQLLAGLIHRHQVLRLGAVFASALLRAISFLERNWFQLCNDIR 211 (565)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~P~~v~~~~d~~~~~Y~~ll~~L~~~~~v~~is~~~~~~l~~~~~~le~~w~el~~dI~ 211 (565)
+.++++.+.. +...|++|.+++.+.|..+++||||||+|.++++|+.|+++||++|+.+++.|+++|+++|+||+
T Consensus 160 ~~~~~~~~~~-----~~~~~~~P~~~~~~~~~~~~~y~~ll~~l~~~~~l~~i~~~~p~~l~~~~~~le~~~~~l~~dI~ 234 (528)
T PF03321_consen 160 GIPYRMIPPW-----FRSWFTSPSEVIAAIDDWEAKYCHLLCALLQDRDLRMISGWFPSFLLLLFRLLEKHWEELVEDIR 234 (528)
T ss_dssp HHHHT--SCC-----HHG-BSS-HHHHT-S-HHHHHHHHHHHHHHCGGGEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccchhhChHH-----HccCccCCHHHHhcccHHHHHHHHHHHHhhcccCcCEEEeeCHHHHHHHHHHHHHhhhHhhHHhc
Confidence 9988842221 11469999999999988899999999999978899999999999999999999999999999999
Q ss_pred cccCCCCCCCccchhhhhhhcCCCChhHHHHHHHHhcCCCccccccccCCCCceEEEEEecchhhhHHHHHHhcCCCCce
Q 044130 212 SGRLDLTITDPGCRSSTLSLLTSPNPTLADEIEEICSRPSWKGILCQLWPRAKYIEAVVTGSMAQYIPSLEYYSAGKLPL 291 (565)
Q Consensus 212 ~Gt~~~~i~~~~~r~~l~~~L~~p~p~~A~~L~~~~~~~~~~gi~~~lWP~l~~i~~~~~G~~~~y~~~l~~~~g~~~~~ 291 (565)
+|+++ .++ |||+||++|+++|+++ +|++++|||||++|.||++|+|++|+++|++|+|+ +++
T Consensus 235 ~G~~~--------------~~~-p~p~rA~~L~~~~~~~--~~~~~~lWP~L~~v~~~~~g~~~~y~~~l~~~~g~-~~~ 296 (528)
T PF03321_consen 235 DGTLS--------------LLR-PNPERAAELRAEFEKG--RGIPKRLWPNLKLVSCWGGGSMAPYAPKLREYFGG-VPI 296 (528)
T ss_dssp HTS----------------C-S---HHHHHHHHHHHCCS--TTHHHHHSTT--EEEEE-SGGGGGGHHHHHHHHTT-S-E
T ss_pred CCccc--------------cCC-CCHHHHHHHHHhhccc--CCCHHHhCCCCcEEEEEcCCChHHHHHHHHHHcCC-Cce
Confidence 99999 334 9999999999999996 89999999999999999999999999999999999 999
Q ss_pred ecccccccceeeeecCCCCCCCCCceeeecCCceeEEeeeCCCCCCccccccccccccCCCCceeeccCcccCCeEEEEe
Q 044130 292 VGTMYASSECYFGVNLKPLSNPADVSFTLLPNMCYFEFLPLGGENGTLLSMEFNEEEEVPNDKLVDLGHVRVGHYYELVV 371 (565)
Q Consensus 292 ~~~~y~aSEg~~gi~~~~~~~~~~~~~~l~p~~~ffEFip~~~~~~~~~~~~~~~~~~~~~~~~v~l~eve~G~~YelVi 371 (565)
++.+|+||||+||||+++. ..+|+|+|+.+||||||+++.++ ...+++++++++|||+|++|||||
T Consensus 297 ~~~~y~ASEg~i~i~~~~~----~~~~~l~~~~~ffEFip~~~~~~----------~~~~~~~~l~~~ele~G~~Yelvi 362 (528)
T PF03321_consen 297 QSKGYGASEGFIGIPLDPE----DPGYVLAPDSGFFEFIPVDEDEQ----------NPSEQPKTLLLHELEVGEEYELVI 362 (528)
T ss_dssp EE-EEEETTEEEEEES-CC----C--EEE-TTSSEEEEEE-STT-----------------SSSEEGGG--TT-EEEEEE
T ss_pred eeccccccceEEEEecCCC----CCceEeecCCeEEEEEeccCCcc----------cccCCCceecHHHhcCCCeEEEEE
Confidence 9999999999999999853 67999999999999999986431 013569999999999999999999
Q ss_pred ccccceeeeecCCEEEEeeeeCCCCEEEEEeecCceeeeeecccCHHHHHHHHHHHHhhcccCCCeEEeEEEeec-CCCC
Q 044130 372 TTFAGLNRYRIGDVLQVTGFYNRAPQFRFICRRNVVLSIDNDKTNEEDLHKSVTIAKNLLEPYSALLVEYTSYAD-TSTV 450 (565)
Q Consensus 372 Tt~~GLyRYriGDvV~v~gf~~~~P~i~F~gR~~~~l~i~GEkl~e~~v~~av~~~~~~l~~~g~~l~~f~~~~d-~~~~ 450 (565)
||.+|||||||||||||+||++++|+|+|+||.++++|++|||++|++|++||.++++ +.|+.+.+|++.++ .++.
T Consensus 363 Tt~~GLyRY~iGDvVrv~gf~~~~P~i~F~~R~~~~l~l~gEkl~e~~v~~av~~~~~---~~~~~~~~f~~~~~~~~~~ 439 (528)
T PF03321_consen 363 TTNSGLYRYRIGDVVRVTGFYNQTPRIEFVGRRGQVLSLFGEKLSEEQVQEAVARALQ---ETGLELRDFTVAPDPSSGN 439 (528)
T ss_dssp ESTTS-SSEEECEEEEEEEEETTEEEEEEEEETTEEE-SSS--EEHHHHHHHHHHHHH---CTT-EEEEEEEEEE--SSS
T ss_pred ecccceeeeecCCEEEEeeccCCCcEEEEeccCCceeecceeecCHHHHHHHHHHHHH---hcCCceeeEEEEeecccCC
Confidence 9999999999999999999999999999999999999999999999999999999974 58999999999999 6789
Q ss_pred CceeEEEEEEEecCCCCCCCChHHHHHHHHHHHHHHh---ChHHHHhhccCCccCCeEEEEeCCCcHHHHHHHHHhc-CC
Q 044130 451 PGHYVLYWEIQIVDSPALPLDHQKVLEECCIAVEEQL---DYVYRRCRSHDKSVGPLEIRVVEPGTFETLMDLLVSQ-GG 526 (565)
Q Consensus 451 p~~Y~l~~e~e~~~~~~~~~~~~~~l~~~~~~ld~~L---n~~Y~~~R~~~g~l~p~~v~~v~~gtf~~~~~~~~~~-G~ 526 (565)
|+||++|||++. . .+.++.|++.||++| |++|+.+|..+|+|+||+|++|++|+|++|+++++++ |+
T Consensus 440 ~~~Y~~~~e~~~--~-------~~~~~~~~~~lD~~L~~~n~~Y~~~R~~~g~L~p~~v~~v~~g~f~~~~~~~~~~~G~ 510 (528)
T PF03321_consen 440 PPHYVLFWELEG--E-------PDDLEELAKALDESLQELNPHYRRARESDGQLGPPRVHIVRPGTFDALMERAVARLGG 510 (528)
T ss_dssp SBEEEEEEEECS----------HHHHHHHHHHHHHCS----HHHHHHHHTSTSC---EEEEE-TTHHHHHHHHHHCT-T-
T ss_pred CCceEEEEEeCC--C-------chHHHHHHHHHHHHhhhCCchHHHHHhhcCCcCCcEEEEeCcchHHHHHHHHhhcCCC
Confidence 999999999962 1 337889999999999 9999999964379999999999999999999999998 99
Q ss_pred CCCCCCCCcccCCChHHH
Q 044130 527 SINQYKTPRCIKSNNAAL 544 (565)
Q Consensus 527 ~~~Q~K~Pr~~~~~~~~~ 544 (565)
+.+|||+|||++ ++++.
T Consensus 511 ~~~Q~K~pr~~~-~~~~~ 527 (528)
T PF03321_consen 511 SAGQYKVPRLIR-DREFV 527 (528)
T ss_dssp -SSS----SS---TCHHH
T ss_pred CccceeCccccC-ccccC
Confidence 999999999999 88874
No 5
>COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism]
Probab=99.68 E-value=3.3e-15 Score=159.54 Aligned_cols=209 Identities=17% Similarity=0.215 Sum_probs=150.0
Q ss_pred EEEEEecc---hhhhHHHHHHhcCCCCceecccccccceee-eecCCCCCCCCCceeeecCCceeEEeeeCCCCCCcccc
Q 044130 266 IEAVVTGS---MAQYIPSLEYYSAGKLPLVGTMYASSECYF-GVNLKPLSNPADVSFTLLPNMCYFEFLPLGGENGTLLS 341 (565)
Q Consensus 266 i~~~~~G~---~~~y~~~l~~~~g~~~~~~~~~y~aSEg~~-gi~~~~~~~~~~~~~~l~p~~~ffEFip~~~~~~~~~~ 341 (565)
|..++.|+ +...++.|++.+| ++.+ ..||+||++. | ...|.. ..++|++.+.-|+|-+++++.+
T Consensus 212 lk~~i~gaE~~see~R~~ie~~~g--~~~~-diYGltE~~g~g---~~eC~~-~~glhi~eD~~~~Ei~dP~t~e----- 279 (438)
T COG1541 212 LKKGIFGAEPWSEEMRKVIENRFG--CKAF-DIYGLTEGFGPG---AGECTE-RNGLHIWEDHFIFEIVDPETGE----- 279 (438)
T ss_pred eeEEEEecccCCHHHHHHHHHHhC--Ccee-eccccccccCCc---cccccc-ccCCCcchhhceeeeecCCcCc-----
Confidence 55666776 5688899999999 5666 9999999954 4 234544 3489988888899999988632
Q ss_pred ccccccccCCCCceeeccCcccCCeEEEEeccc--cc--eeeeecCCEEEEeeee----CCCCEE-EEEeecCceeeeee
Q 044130 342 MEFNEEEEVPNDKLVDLGHVRVGHYYELVVTTF--AG--LNRYRIGDVLQVTGFY----NRAPQF-RFICRRNVVLSIDN 412 (565)
Q Consensus 342 ~~~~~~~~~~~~~~v~l~eve~G~~YelViTt~--~G--LyRYriGDvV~v~gf~----~~~P~i-~F~gR~~~~l~i~G 412 (565)
. |..|+++|||+||+ .| |.|||+||++.+.... +..|+| ++.||.++|+.+.|
T Consensus 280 -------------~-----l~dge~GelV~T~L~~~~~PlIRYrtgDit~i~~~~C~cGr~~~ri~~I~GR~dD~l~~~G 341 (438)
T COG1541 280 -------------Q-----LPDGERGELVITTLTKEGMPLIRYRTGDITVILSDPCGCGRTHRRIERIEGRSDDMLIVRG 341 (438)
T ss_pred -------------c-----CCCCCeeEEEEEeccccCcceEEEEcCCeeEecccCCCCCCccccccccCcccccEEEECC
Confidence 3 44999999999998 34 9999999999998722 345566 89999999999999
Q ss_pred cccCHHHHHHHHHHHHhhcccCCCeEEeEEEeecCCCCCceeEEEEEEEecCCCCCCCChHHHHHHHHHHHHHHhChHHH
Q 044130 413 DKTNEEDLHKSVTIAKNLLEPYSALLVEYTSYADTSTVPGHYVLYWEIQIVDSPALPLDHQKVLEECCIAVEEQLDYVYR 492 (565)
Q Consensus 413 Ekl~e~~v~~av~~~~~~l~~~g~~l~~f~~~~d~~~~p~~Y~l~~e~e~~~~~~~~~~~~~~l~~~~~~ld~~Ln~~Y~ 492 (565)
.++++.+++.++.+... +.. +|.+.......-...++-+|++.. . .. .....+++..+-..+
T Consensus 342 ~~vfp~~ie~~l~~~~~------~~~-~yqi~~~~~~~~d~L~V~vE~~~~-~--~~---~~~~~~~~~~l~~~~----- 403 (438)
T COG1541 342 VNVFPSQIERVLLQIPE------VTP-HYQIILTRNGGLDELTVRVELENE-A--EE---LEDERRLAKKLIKNI----- 403 (438)
T ss_pred EEeCHHHHHHHHhcccC------CCc-eEEEEEecCCCCceEEEEEEecCc-c--cc---hHHHHHHHHHHHHHH-----
Confidence 99999999999977532 111 888876654344566677777521 1 11 123333444554444
Q ss_pred HhhccCCccCCeEEEEeCCCcHHHHHHHHHhcCCCCCCCCCCcccC
Q 044130 493 RCRSHDKSVGPLEIRVVEPGTFETLMDLLVSQGGSINQYKTPRCIK 538 (565)
Q Consensus 493 ~~R~~~g~l~p~~v~~v~~gtf~~~~~~~~~~G~~~~Q~K~Pr~~~ 538 (565)
.... .+. ++|.+|.+|+.++ ..| |.+|++.
T Consensus 404 --~~~~-~~~-~~v~~v~~g~l~r------~~~------K~krvvd 433 (438)
T COG1541 404 --KSEL-GVR-VEVELVEPGELPR------TEG------KAKRVVD 433 (438)
T ss_pred --Hhhc-CCc-eEEEEEeccceec------ccC------ceeEEEE
Confidence 3222 355 8999999999887 223 7778775
No 6
>TIGR03335 F390_ftsA coenzyme F390 synthetase. This enzyme, characterized in Methanobacterium thermoautotrophicum and found in several other methanogens, modifies coenzyme F420 by ligation of AMP (or GMP) from ATP (or GTP). On F420, it activates an aromatic hydroxyl group, which is unusual chemistry for an adenylyltransferase. This enzyme name has been attached to numbers of uncharacterized genes likely to instead act as phenylacetate CoA ligase, based on proximity to predicted indolepyruvate ferredoxin oxidoreductase (1.2.7.8) genes. The enzyme acts during transient exposure of the organism to oxygen.
Probab=99.54 E-value=1.3e-13 Score=150.54 Aligned_cols=207 Identities=14% Similarity=0.102 Sum_probs=133.5
Q ss_pred EEEEEecc---hhhhHHHHHHhcCCCCceecccccccceeeeecCCCCCCCCCceeeecCCceeEEeeeCCCCCCccccc
Q 044130 266 IEAVVTGS---MAQYIPSLEYYSAGKLPLVGTMYASSECYFGVNLKPLSNPADVSFTLLPNMCYFEFLPLGGENGTLLSM 342 (565)
Q Consensus 266 i~~~~~G~---~~~y~~~l~~~~g~~~~~~~~~y~aSEg~~gi~~~~~~~~~~~~~~l~p~~~ffEFip~~~~~~~~~~~ 342 (565)
+..+++|| ....+..+++.+| ++++ ..||+||+.++ ..|.. ..+|++.++..++|.+++++
T Consensus 206 lr~ii~gGE~l~~~~r~~ie~~~g--~~v~-~~YG~TE~~~~----~~c~~-~~g~h~~~d~~~vEIvDp~~-------- 269 (445)
T TIGR03335 206 IRRLVVGGESFADESRNYVEELWG--CEVY-NTYGSTEGTMC----GECQA-VAGLHVPEDLVHLDVYDPRH-------- 269 (445)
T ss_pred ceEEEEcCCCCCHHHHHHHHHHhC--CcEE-ecCChhhhhhe----EEecC-CCCccccCCceEEEEEcCCC--------
Confidence 55666666 2345677888886 8888 89999998543 23322 45788888778999998653
Q ss_pred cccccccCCCCceeeccCcccCCeEEEEecccc------c--eeeeecCCEEEEee-ee----CCCCEEEEEeecCceee
Q 044130 343 EFNEEEEVPNDKLVDLGHVRVGHYYELVVTTFA------G--LNRYRIGDVLQVTG-FY----NRAPQFRFICRRNVVLS 409 (565)
Q Consensus 343 ~~~~~~~~~~~~~v~l~eve~G~~YelViTt~~------G--LyRYriGDvV~v~g-f~----~~~P~i~F~gR~~~~l~ 409 (565)
.++ |..|+.+|||+||+. | |.||||||++++.. -. ...|+|..+||.++|+.
T Consensus 270 ----------~~~-----vp~Ge~GELvvT~L~~~~~r~~~PliRYrtgD~~~~~~~~~C~CGr~~~r~~~~gR~dd~~~ 334 (445)
T TIGR03335 270 ----------QRF-----LPDGECGRIVLTTLLKPGERCGSLLINYDTEDTTVVISRDRCPCGRTHMRILNPEREAETIW 334 (445)
T ss_pred ----------CCC-----CcCCCceEEEEEecCCCCccCCceEEEeecCceEEEecCCCCCCCCCcceeCCCcccCceEE
Confidence 122 358999999999983 3 99999999999742 11 34578887899999999
Q ss_pred eeecccCHHHHHHHHHHHHhhcccCCCeEEeEEEeecCCC-CCceeEEEEEEEecCCCCCCCChHHHHHHHHHHHHHHhC
Q 044130 410 IDNDKTNEEDLHKSVTIAKNLLEPYSALLVEYTSYADTST-VPGHYVLYWEIQIVDSPALPLDHQKVLEECCIAVEEQLD 488 (565)
Q Consensus 410 i~GEkl~e~~v~~av~~~~~~l~~~g~~l~~f~~~~d~~~-~p~~Y~l~~e~e~~~~~~~~~~~~~~l~~~~~~ld~~Ln 488 (565)
+.|.++++.+|+++|........-++ +|.+..+... .-.. |-+++|..+. . ....+.+.+.+.+.+.
T Consensus 335 ~~g~~~~p~~ie~~l~~~~~~~~~~~----~~~~~~~~~~~~~~~--~~v~~e~~~~----~--~~~~~~~~~~~~~~~~ 402 (445)
T TIGR03335 335 ISGVPFNRVDVERAVFQRENMDSLTG----EYEAFLYGEEEGEIT--LRVSLECEDK----D--NCSIHDIQENFTGTFL 402 (445)
T ss_pred ECCEEeCHHHHHHHHhccCCCCCCCc----cEEEEEecCCCCCce--EEEEEEecCc----c--cchHHHHHHHHHHHHh
Confidence 99999999999999976311000122 6877665321 1113 3344443121 1 1123444455555421
Q ss_pred hHHHHhhcc--CCccCCeEEEEeCCCcHHH
Q 044130 489 YVYRRCRSH--DKSVGPLEIRVVEPGTFET 516 (565)
Q Consensus 489 ~~Y~~~R~~--~g~l~p~~v~~v~~gtf~~ 516 (565)
..++..+.. .+.+. ++|.+|++|++++
T Consensus 403 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 431 (445)
T TIGR03335 403 KYKPELIGSYDEGIFQ-ILVNFTGPGELEL 431 (445)
T ss_pred hhhhhhhhhhhcceEE-EEEEEeCCCCccc
Confidence 222221110 23566 7899999999976
No 7
>TIGR02155 PA_CoA_ligase phenylacetate-CoA ligase. Phenylacetate-CoA ligase (PA-CoA ligase) catalyzes the first step in aromatic catabolism of phenylacetic acid (PA) into phenylacetyl-CoA (PA-CoA). Often located in a conserved gene cluster with enzymes involved in phenylacetic acid activation (paaG/H/I/J), phenylacetate-CoA ligase has been found among the proteobacteria as well as in gram positive prokaryotes. In the B-subclass proteobacterium Azoarcus evansii, phenylacetate-CoA ligase has been shown to be induced under aerobic and anaerobic growth conditions. It remains unclear however, whether this induction is due to the same enzyme or to another isoenzyme restricted to specific anaerobic growth conditions.
Probab=99.49 E-value=1.5e-12 Score=140.62 Aligned_cols=204 Identities=16% Similarity=0.172 Sum_probs=130.0
Q ss_pred EEEEEecc---hhhhHHHHHHhcCCCCceeccccccccee-eeecCCCCCCCCCceeeecCCceeEEeeeCCCCCCcccc
Q 044130 266 IEAVVTGS---MAQYIPSLEYYSAGKLPLVGTMYASSECY-FGVNLKPLSNPADVSFTLLPNMCYFEFLPLGGENGTLLS 341 (565)
Q Consensus 266 i~~~~~G~---~~~y~~~l~~~~g~~~~~~~~~y~aSEg~-~gi~~~~~~~~~~~~~~l~p~~~ffEFip~~~~~~~~~~ 341 (565)
+..+++|| ....++.+++.+| ++++ ..||+||+. .++.. .|.....++++..+..+.|.+++++
T Consensus 197 lr~i~~~ge~l~~~~~~~i~~~~g--~~v~-~~YG~tE~~~~~~~~--~~~~~~~g~~~~~~~~~~eivd~~~------- 264 (422)
T TIGR02155 197 LQVGIFGAEPWTNAMRKEIEARLG--MKAT-DIYGLSEVIGPGVAM--ECVETQDGLHIWEDHFYPEIIDPHT------- 264 (422)
T ss_pred eEEEEEeCCcCCHHHHHHHHHHhC--CceE-ecccchhhcCCceee--cccccCCCceEecCeeEEEEECCCC-------
Confidence 55555555 3456678888887 7777 889999972 12211 2322244677766667888887543
Q ss_pred ccccccccCCCCceeeccCcccCCeEEEEeccccc----eeeeecCCEEEEeee-eCCCCEE-EEEeecCceeeeeeccc
Q 044130 342 MEFNEEEEVPNDKLVDLGHVRVGHYYELVVTTFAG----LNRYRIGDVLQVTGF-YNRAPQF-RFICRRNVVLSIDNDKT 415 (565)
Q Consensus 342 ~~~~~~~~~~~~~~v~l~eve~G~~YelViTt~~G----LyRYriGDvV~v~gf-~~~~P~i-~F~gR~~~~l~i~GEkl 415 (565)
.++ |..|+.+|||+|+... +.||++||++++..- -+..|++ .|+||.++++.+.|+++
T Consensus 265 -----------g~~-----v~~Ge~Gelvvt~~~~~~~p~~ry~TGDl~~~~~~~Gr~~~~~~~i~GR~~d~i~~~G~~v 328 (422)
T TIGR02155 265 -----------GEV-----LPDGEEGELVFTTLTKEALPVIRYRTRDLTRLLPGTARTMRRMDRITGRSDDMLIIRGVNV 328 (422)
T ss_pred -----------CCC-----CCCCCeeEEEEecCCccccceeeEEcCcEEEEECCCCCcccccccccCccCCeEEECCEEE
Confidence 222 3489999999997632 679999999998641 1344555 89999999999999999
Q ss_pred CHHHHHHHHHHHHhhcccCCCeEEeEEEeecCCCCCceeEEEEEEEecCCCCCCCChHHHHHHHHHHHHHHhChHHHHhh
Q 044130 416 NEEDLHKSVTIAKNLLEPYSALLVEYTSYADTSTVPGHYVLYWEIQIVDSPALPLDHQKVLEECCIAVEEQLDYVYRRCR 495 (565)
Q Consensus 416 ~e~~v~~av~~~~~~l~~~g~~l~~f~~~~d~~~~p~~Y~l~~e~e~~~~~~~~~~~~~~l~~~~~~ld~~Ln~~Y~~~R 495 (565)
++.+|+.++.... ++. ..|.+..+..+.+...++.+|...... .... .+..+.+++.|.+.+ |
T Consensus 329 ~p~eie~~l~~~~------~v~-~~~q~~~~~~~~~~~~~~~v~~~~~~~--~~~~-~~~~~~~~~~i~~~~-------~ 391 (422)
T TIGR02155 329 FPTQLEEVILKMD------ELS-PHYQLELTRNGHMDELTLKVELKPESY--TLRL-HEQASLLAGEIQHTI-------K 391 (422)
T ss_pred CHHHHHHHHHhCc------CcC-CCEEEEEEcCCCccEEEEEEEEecCcc--cccc-hHHHHHHHHHHHHHH-------H
Confidence 9999999997632 221 146555443322335667777642110 0001 123334455666666 5
Q ss_pred ccCCccCCeEEEEeCCCcHHH
Q 044130 496 SHDKSVGPLEIRVVEPGTFET 516 (565)
Q Consensus 496 ~~~g~l~p~~v~~v~~gtf~~ 516 (565)
... .+. ++|.++.+|++.+
T Consensus 392 ~~~-~~~-~~v~~~~~~~lp~ 410 (422)
T TIGR02155 392 QEV-GVS-MDVHLVEPGSLPR 410 (422)
T ss_pred hcc-CcE-EEEEEECCCCccC
Confidence 443 344 6899999999875
No 8
>TIGR02304 aden_form_hyp probable adenylate-forming enzyme. Members of this family form a distinct clade within a larger family of proteins that also includes coenzyme F390 synthetase, an enzyme known in Methanobacterium thermoautotrophicum and a few other methanogenic archaea. That enzyme adenylates coenzyme F420 to F390, a reversible process, during oxygen stress. Other informative homologies include domains of the non-ribosomal peptide synthetases involved in activation by adenylation. The family defined by this model is likely to be of an adenylate-forming enzyme related to but distinct from coenzyme F390 synthetase.
Probab=99.25 E-value=1.5e-09 Score=117.94 Aligned_cols=142 Identities=15% Similarity=0.211 Sum_probs=98.0
Q ss_pred EEEEecc---hhhhHHHHHHhcCCCCceecccccccceeeeecCCCCCCCCCceeeecCCceeEEe--eeCCCCCCcccc
Q 044130 267 EAVVTGS---MAQYIPSLEYYSAGKLPLVGTMYASSECYFGVNLKPLSNPADVSFTLLPNMCYFEF--LPLGGENGTLLS 341 (565)
Q Consensus 267 ~~~~~G~---~~~y~~~l~~~~g~~~~~~~~~y~aSEg~~gi~~~~~~~~~~~~~~l~p~~~ffEF--ip~~~~~~~~~~ 341 (565)
..++++| ....++.|++.|| ++++ ..||+|||++| ..|+ +.+||+.++..|+|+ ++++
T Consensus 215 k~ii~~~E~l~~~~r~~Ie~~fg--~~V~-~~YG~tEg~la----~eC~--~g~lHl~ed~~~vE~~ivD~~-------- 277 (430)
T TIGR02304 215 KKVISVAEVLEPQDRELIRNVFK--NTVH-QIYQATEGFLA----STCR--CGTLHLNEDLVHIEKQYLDEH-------- 277 (430)
T ss_pred eEEEEccCCCCHHHHHHHHHHhC--CCee-EccCCchhheE----EecC--CCCEEEccccEEEEeeEECCC--------
Confidence 3444444 3456677899998 7888 79999998777 4443 336999999999995 5422
Q ss_pred ccccccccCCCCceeeccCcccCCeEEEEeccccc----eeeeecCCEEEEeeee----CCCCEE-EEEeecCceeee--
Q 044130 342 MEFNEEEEVPNDKLVDLGHVRVGHYYELVVTTFAG----LNRYRIGDVLQVTGFY----NRAPQF-RFICRRNVVLSI-- 410 (565)
Q Consensus 342 ~~~~~~~~~~~~~~v~l~eve~G~~YelViTt~~G----LyRYriGDvV~v~gf~----~~~P~i-~F~gR~~~~l~i-- 410 (565)
.+ ...|||++.- |.||++||++++.+-. +..|+| ++.||.++++.+
T Consensus 278 -----------~~------------~~~ViT~L~n~~~PlIRYrtGD~~~~~~~~C~CGr~~~~i~~I~GR~dD~l~~~~ 334 (430)
T TIGR02304 278 -----------KR------------FVPIITDFTRTTQPIVRYRLNDILVESEQPCSCGSATMAIERIEGRQDDIFQLIT 334 (430)
T ss_pred -----------Cc------------eEEEEecCCCccceEEeeeCCCEEEeCCCCCCCCCcccccCCccCccCCEEEEec
Confidence 11 2349999853 9999999999875422 335788 599999999976
Q ss_pred -eecc--cCHHHHHHHHHHHHhhcccCCCeEEeEEEeecCCCCCceeEEEE
Q 044130 411 -DNDK--TNEEDLHKSVTIAKNLLEPYSALLVEYTSYADTSTVPGHYVLYW 458 (565)
Q Consensus 411 -~GEk--l~e~~v~~av~~~~~~l~~~g~~l~~f~~~~d~~~~p~~Y~l~~ 458 (565)
.|.+ +++..+..++.... .+ +.+|.+... .+.+.+|.+
T Consensus 335 ~~G~~v~v~p~~~~~~i~~~~-----~~--i~~yQi~Q~---~~~~l~v~~ 375 (430)
T TIGR02304 335 RSGDEQTVFPDFIRRVILFTL-----PL--IVEYRVLQT---GSAQLELIA 375 (430)
T ss_pred CCCCeEEeCHHHHHHHHHhcC-----CC--CceEEEEEc---cCCeEEEEE
Confidence 4544 48888877765432 12 468887754 355665444
No 9
>PRK00174 acetyl-CoA synthetase; Provisional
Probab=98.38 E-value=6.2e-05 Score=85.70 Aligned_cols=128 Identities=13% Similarity=0.114 Sum_probs=81.3
Q ss_pred EEEEEecch---hhhHHHHHHhcC-CCCceecccccccceeeee--cCC--CCCCCCCceeeecCCceeEEeeeCCCCCC
Q 044130 266 IEAVVTGSM---AQYIPSLEYYSA-GKLPLVGTMYASSECYFGV--NLK--PLSNPADVSFTLLPNMCYFEFLPLGGENG 337 (565)
Q Consensus 266 i~~~~~G~~---~~y~~~l~~~~g-~~~~~~~~~y~aSEg~~gi--~~~--~~~~~~~~~~~l~p~~~ffEFip~~~~~~ 337 (565)
+..+.+||. ..-...+++.+| .+++++ ..||+||+...+ +.. ..+.++..+. .+|+. -++.++.+
T Consensus 369 lr~i~~~Ge~l~~~~~~~~~~~~~~~~~~i~-~~YG~TE~~~~~~~~~~~~~~~~~~~vG~-p~~g~-~~~i~d~~---- 441 (637)
T PRK00174 369 LRLLGSVGEPINPEAWEWYYKVVGGERCPIV-DTWWQTETGGIMITPLPGATPLKPGSATR-PLPGI-QPAVVDEE---- 441 (637)
T ss_pred eeEEEEeCCCCCHHHHHHHHHHhCCCCCceE-ecccccccCCceEecCCCCCCcCCCcccC-CCCCc-eEEEECCC----
Confidence 555666662 233455666664 337888 999999974321 110 0111222232 12222 23334321
Q ss_pred ccccccccccccCCCCceeeccCcccCCeEEEEeccc-----------------------cceeeeecCCEEEEeeeeCC
Q 044130 338 TLLSMEFNEEEEVPNDKLVDLGHVRVGHYYELVVTTF-----------------------AGLNRYRIGDVLQVTGFYNR 394 (565)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~v~l~eve~G~~YelViTt~-----------------------~GLyRYriGDvV~v~gf~~~ 394 (565)
.++ +..|+.+||+|+.. .| .|++||++++..
T Consensus 442 ---------------g~~-----~~~g~~Gel~v~g~~p~~~~gy~~~~~~~~~~~~~~~~g--~~~TGDl~~~d~---- 495 (637)
T PRK00174 442 ---------------GNP-----LEGGEGGNLVIKDPWPGMMRTIYGDHERFVKTYFSTFKG--MYFTGDGARRDE---- 495 (637)
T ss_pred ---------------CCC-----CCCCCcEEEEEcCCCCcccccccCCHHHHHHhhhcCCCC--EEECCceEEEcC----
Confidence 222 45789999999862 23 299999999863
Q ss_pred CCEEEEEeecCceeeeeecccCHHHHHHHHHH
Q 044130 395 APQFRFICRRNVVLSIDNDKTNEEDLHKSVTI 426 (565)
Q Consensus 395 ~P~i~F~gR~~~~l~i~GEkl~e~~v~~av~~ 426 (565)
.-.+.|+||.++++++.|+++...+|+.+|.+
T Consensus 496 dG~l~~~GR~dd~ik~~G~~v~p~eIE~~l~~ 527 (637)
T PRK00174 496 DGYYWITGRVDDVLNVSGHRLGTAEIESALVA 527 (637)
T ss_pred CCcEEEEEecccEEEeCCEEECHHHHHHHHHh
Confidence 23789999999999999999999999999965
No 10
>PTZ00237 acetyl-CoA synthetase; Provisional
Probab=98.33 E-value=2.8e-05 Score=89.00 Aligned_cols=128 Identities=11% Similarity=0.030 Sum_probs=81.7
Q ss_pred EEEEEecch---hhhHHHHHHhcCCCCceecccccccceeeeecCCCC---CCCCCceeeecCCceeEEeeeCCCCCCcc
Q 044130 266 IEAVVTGSM---AQYIPSLEYYSAGKLPLVGTMYASSECYFGVNLKPL---SNPADVSFTLLPNMCYFEFLPLGGENGTL 339 (565)
Q Consensus 266 i~~~~~G~~---~~y~~~l~~~~g~~~~~~~~~y~aSEg~~gi~~~~~---~~~~~~~~~l~p~~~ffEFip~~~~~~~~ 339 (565)
+..+.+||. ....+.+++.+| ++++ ..||.||+...+-.... .+.+..+.. +|+ .-.+.++.+
T Consensus 382 Lr~i~~~G~~l~~~~~~~~~~~~g--~~i~-~~yG~TE~~~~~~~~~~~~~~~~~s~G~p-~~g-~~~~i~d~~------ 450 (647)
T PTZ00237 382 LKEIWCGGEVIEESIPEYIENKLK--IKSS-RGYGQTEIGITYLYCYGHINIPYNATGVP-SIF-IKPSILSED------ 450 (647)
T ss_pred heEEEecCccCCHHHHHHHHHhcC--CCEE-eeechHHhChhhhccCCCCCCCCCCCccC-cCC-ceEEEECCC------
Confidence 555666662 234456666666 7888 89999998532111110 001111221 121 122333211
Q ss_pred ccccccccccCCCCceeeccCcccCCeEEEEeccc------ccee---------------eeecCCEEEEeeeeCCCCEE
Q 044130 340 LSMEFNEEEEVPNDKLVDLGHVRVGHYYELVVTTF------AGLN---------------RYRIGDVLQVTGFYNRAPQF 398 (565)
Q Consensus 340 ~~~~~~~~~~~~~~~~v~l~eve~G~~YelViTt~------~GLy---------------RYriGDvV~v~gf~~~~P~i 398 (565)
. .+|..|+.+||+++.. .|+| .|++||+.++.. --.+
T Consensus 451 -------------g-----~~~~~ge~GEl~v~~p~~p~~~~gy~~~~~~~~~~f~~~~g~~~TGDlg~~d~----dG~l 508 (647)
T PTZ00237 451 -------------G-----KELNVNEIGEVAFKLPMPPSFATTFYKNDEKFKQLFSKFPGYYNSGDLGFKDE----NGYY 508 (647)
T ss_pred -------------C-----CCCCCCCceEEEEeccCCchhhCceeCCHHHHHHHHhCCCCEEECCcEEEECC----CCeE
Confidence 1 2355789999999742 4555 299999998863 3468
Q ss_pred EEEeecCceeeeeecccCHHHHHHHHHH
Q 044130 399 RFICRRNVVLSIDNDKTNEEDLHKSVTI 426 (565)
Q Consensus 399 ~F~gR~~~~l~i~GEkl~e~~v~~av~~ 426 (565)
.|+||.++++++.|++++..+|++++..
T Consensus 509 ~i~GR~dd~i~~~G~rI~p~eIE~~l~~ 536 (647)
T PTZ00237 509 TIVSRSDDQIKISGNKVQLNTIETSILK 536 (647)
T ss_pred EEEeccCCEEEECCEEeCHHHHHHHHHh
Confidence 9999999999999999999999999976
No 11
>PRK06060 acyl-CoA synthetase; Validated
Probab=98.28 E-value=3e-05 Score=89.52 Aligned_cols=129 Identities=13% Similarity=0.130 Sum_probs=85.2
Q ss_pred EEEEEecch---hhhHHHHHHhcCCCCceecccccccceeeeecCCC--CCCCCCceeeecCCceeEEeeeCCCCCCccc
Q 044130 266 IEAVVTGSM---AQYIPSLEYYSAGKLPLVGTMYASSECYFGVNLKP--LSNPADVSFTLLPNMCYFEFLPLGGENGTLL 340 (565)
Q Consensus 266 i~~~~~G~~---~~y~~~l~~~~g~~~~~~~~~y~aSEg~~gi~~~~--~~~~~~~~~~l~p~~~ffEFip~~~~~~~~~ 340 (565)
+.++++||. ...++++.+.+++ ++++ ..||.||+........ ...+...+. .+|+. ..+.++.+
T Consensus 262 lr~i~~gGe~l~~~~~~~~~~~~~~-~~~~-~~YG~tE~~~~~~~~~~~~~~~~~iG~-p~~~~-~v~i~d~~------- 330 (705)
T PRK06060 262 LRCVVSAGEALELGLAERLMEFFGG-IPIL-DGIGSTEVGQTFVSNRVDEWRLGTLGR-VLPPY-EIRVVAPD------- 330 (705)
T ss_pred eeEEEEecCcCCHHHHHHHHHHcCC-CceE-eeeeccccCceEEeccCCCCCcCcccc-cCCCc-EEEEECCC-------
Confidence 667777772 3455677777876 8888 9999999842211111 101111222 23332 33444322
Q ss_pred cccccccccCCCCceeeccCcccCCeEEEEeccc---cceee-----------eecCCEEEEeeeeCCCCEEEEEeecCc
Q 044130 341 SMEFNEEEEVPNDKLVDLGHVRVGHYYELVVTTF---AGLNR-----------YRIGDVLQVTGFYNRAPQFRFICRRNV 406 (565)
Q Consensus 341 ~~~~~~~~~~~~~~~v~l~eve~G~~YelViTt~---~GLyR-----------YriGDvV~v~gf~~~~P~i~F~gR~~~ 406 (565)
.++ +..|+..||+|+.. .|.|. |++||++++.. + -.+.|+||.++
T Consensus 331 ------------g~~-----~~~g~~GEl~i~g~~v~~GY~~~~~~~~~~~~~~~TGDl~~~~~--d--G~l~~~GR~dd 389 (705)
T PRK06060 331 ------------GTT-----AGPGVEGDLWVRGPAIAKGYWNRPDSPVANEGWLDTRDRVCIDS--D--GWVTYRCRADD 389 (705)
T ss_pred ------------CCC-----CCCCCceEEEEccchhhhhhhCCCcccccCCCcEECCeeEEECC--C--ceEEEecccCc
Confidence 112 44788999999763 34332 99999998763 2 36999999999
Q ss_pred eeeeeecccCHHHHHHHHHH
Q 044130 407 VLSIDNDKTNEEDLHKSVTI 426 (565)
Q Consensus 407 ~l~i~GEkl~e~~v~~av~~ 426 (565)
++.+.|+++...+|+.++.+
T Consensus 390 ~ik~~G~~v~~~eIE~~l~~ 409 (705)
T PRK06060 390 TEVIGGVNVDPREVERLIIE 409 (705)
T ss_pred eEEECCEEECHHHHHHHHHh
Confidence 99999999999999999976
No 12
>TIGR02188 Ac_CoA_lig_AcsA acetate--CoA ligase. This model describes acetate-CoA ligase (EC 6.2.1.1), also called acetyl-CoA synthetase and acetyl-activating enzyme. It catalyzes the reaction ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA and belongs to the family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=98.27 E-value=0.00019 Score=81.48 Aligned_cols=130 Identities=11% Similarity=0.077 Sum_probs=81.1
Q ss_pred EEEEEecch---hhhHHHHHHhcC-CCCceecccccccceeeee-cCCC---CCCCCCceeeecCCceeEEeeeCCCCCC
Q 044130 266 IEAVVTGSM---AQYIPSLEYYSA-GKLPLVGTMYASSECYFGV-NLKP---LSNPADVSFTLLPNMCYFEFLPLGGENG 337 (565)
Q Consensus 266 i~~~~~G~~---~~y~~~l~~~~g-~~~~~~~~~y~aSEg~~gi-~~~~---~~~~~~~~~~l~p~~~ffEFip~~~~~~ 337 (565)
+.++.+||. ..-.+.+.+.++ .+++++ ..||.||+...+ ...+ ...++..+.. +|+. -.+.++.+
T Consensus 360 lr~i~~~G~~l~~~~~~~~~~~~~~~~~~i~-~~yG~TE~~~~~~~~~~~~~~~~~~~~G~p-~~g~-~~~i~d~~---- 432 (625)
T TIGR02188 360 LRLLGSVGEPINPEAWMWYYKVVGKERCPIV-DTWWQTETGGIMITPLPGATPTKPGSATLP-FFGI-EPAVVDEE---- 432 (625)
T ss_pred eeEEEEecCCCCHHHHHHHHHHcCCCCCceE-ecccccccCCceeecCCCCCCcCCCcccCC-cCCc-eEEEECCC----
Confidence 666677763 233455666564 347888 999999974221 1101 0111122221 2221 23333311
Q ss_pred ccccccccccccCCCCceeeccCcc-cCCeEEEEeccc-----ccee----------------eeecCCEEEEeeeeCCC
Q 044130 338 TLLSMEFNEEEEVPNDKLVDLGHVR-VGHYYELVVTTF-----AGLN----------------RYRIGDVLQVTGFYNRA 395 (565)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~v~l~eve-~G~~YelViTt~-----~GLy----------------RYriGDvV~v~gf~~~~ 395 (565)
.+ .+. .|+..||+|+.. .|.| -|++||++++.. +
T Consensus 433 ---------------g~-----~~~~~g~~GeL~v~~p~p~~~~gy~~~~~~~~~~~~~~~~g~~~TGDl~~~d~--d-- 488 (625)
T TIGR02188 433 ---------------GN-----PVEGPGEGGYLVIKQPWPGMLRTIYGDHERFVDTYFSPFPGYYFTGDGARRDK--D-- 488 (625)
T ss_pred ---------------CC-----CCCCCCCeEEEEEccCCCcccccccCChHHHHHHHhccCCCEEECCceEEEcC--C--
Confidence 11 245 789999999872 1222 189999999863 2
Q ss_pred CEEEEEeecCceeeeeecccCHHHHHHHHHH
Q 044130 396 PQFRFICRRNVVLSIDNDKTNEEDLHKSVTI 426 (565)
Q Consensus 396 P~i~F~gR~~~~l~i~GEkl~e~~v~~av~~ 426 (565)
-.+.|+||.++++++.|+++...+|+.+|..
T Consensus 489 G~l~i~GR~dd~i~~~G~ri~p~eIE~~l~~ 519 (625)
T TIGR02188 489 GYIWITGRVDDVINVSGHRLGTAEIESALVS 519 (625)
T ss_pred CcEEEEecccCEEEeCCEEECHHHHHHHHHh
Confidence 3688999999999999999999999999975
No 13
>PRK03584 acetoacetyl-CoA synthetase; Provisional
Probab=98.25 E-value=0.00018 Score=82.24 Aligned_cols=230 Identities=14% Similarity=0.109 Sum_probs=122.1
Q ss_pred ceEEEEEecch---hhhHHHHHHhcCCCCceecccccccceeeeecCC-CCCC--CCCceeeecCCceeEEeeeCCCCCC
Q 044130 264 KYIEAVVTGSM---AQYIPSLEYYSAGKLPLVGTMYASSECYFGVNLK-PLSN--PADVSFTLLPNMCYFEFLPLGGENG 337 (565)
Q Consensus 264 ~~i~~~~~G~~---~~y~~~l~~~~g~~~~~~~~~y~aSEg~~gi~~~-~~~~--~~~~~~~l~p~~~ffEFip~~~~~~ 337 (565)
.-+.++.+||. ..-...+++.++.+++++ ..||.||...++... +..+ ++..+. ..|+.. ...++.+
T Consensus 383 ~sLr~i~~~Ge~l~~~~~~~~~~~~~~~~~~~-~~yG~TE~~~~~~~~~~~~~~~~g~~g~-p~~g~~-~~ivd~~---- 455 (655)
T PRK03584 383 SALRTIGSTGSPLPPEGFDWVYEHVKADVWLA-SISGGTDICSCFVGGNPLLPVYRGEIQC-RGLGMA-VEAWDED---- 455 (655)
T ss_pred hheEEEEEecCCCCHHHHHHHHHHhCCCceEE-eccChHhhhcccccCCCCCCcCCCccCC-CcCCce-eEEECCC----
Confidence 34777777773 234456666675448887 899999963222111 1000 111111 122211 1222211
Q ss_pred ccccccccccccCCCCceeeccCcccCCeEEEEeccc-----ccee------------------eeecCCEEEEeeeeCC
Q 044130 338 TLLSMEFNEEEEVPNDKLVDLGHVRVGHYYELVVTTF-----AGLN------------------RYRIGDVLQVTGFYNR 394 (565)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~v~l~eve~G~~YelViTt~-----~GLy------------------RYriGDvV~v~gf~~~ 394 (565)
.++ + .|+.+||+|+.. .|+| .|++||++++..
T Consensus 456 ---------------g~~-----~-~g~~GeL~v~gp~p~~~~gy~~~~~~~~~~~~~~~~~~g~~~TGDl~~~d~---- 510 (655)
T PRK03584 456 ---------------GRP-----V-VGEVGELVCTKPFPSMPLGFWNDPDGSRYRDAYFDTFPGVWRHGDWIEITE---- 510 (655)
T ss_pred ---------------CCC-----C-CCCceEEEEccCCCCCcceeeCCCccchHHHhhhccCCCEeecCCeEEECC----
Confidence 111 3 588899999763 2333 178999998853
Q ss_pred CCEEEEEeecCceeeeeecccCHHHHHHHHHHHHhhcccCCCeEEeEEEe-ecCCCCCceeEEEEEEEecCCCCCCCChH
Q 044130 395 APQFRFICRRNVVLSIDNDKTNEEDLHKSVTIAKNLLEPYSALLVEYTSY-ADTSTVPGHYVLYWEIQIVDSPALPLDHQ 473 (565)
Q Consensus 395 ~P~i~F~gR~~~~l~i~GEkl~e~~v~~av~~~~~~l~~~g~~l~~f~~~-~d~~~~p~~Y~l~~e~e~~~~~~~~~~~~ 473 (565)
--.+.|+||.++++++.|+++...+|+.+|.+.. + |.+-.|+ .+.......-++|+++.. +. ..+ .
T Consensus 511 dG~l~i~GR~dd~Ik~~G~rI~p~EIE~~l~~~p------~--V~ea~vvg~~~~~~g~~~~a~vv~~~-~~---~~~-~ 577 (655)
T PRK03584 511 HGGVVIYGRSDATLNRGGVRIGTAEIYRQVEALP------E--VLDSLVIGQEWPDGDVRMPLFVVLAE-GV---TLD-D 577 (655)
T ss_pred CCeEEEEeeccCeeecCcEEECHHHHHHHHHhCC------C--cceEEEEeeEcCCCCEEEEEEEEECC-CC---CCc-H
Confidence 2378999999999999999999999999997531 2 2343333 222122234457777642 11 122 2
Q ss_pred HHHHHHHHHHHHHhChHHHHhhccCCccCCeEEEEeC------CCcHHHHHHHHHhcCCCCCCCCCCcccCCChHHHHHH
Q 044130 474 KVLEECCIAVEEQLDYVYRRCRSHDKSVGPLEIRVVE------PGTFETLMDLLVSQGGSINQYKTPRCIKSNNAALMLL 547 (565)
Q Consensus 474 ~~l~~~~~~ld~~Ln~~Y~~~R~~~g~l~p~~v~~v~------~gtf~~~~~~~~~~G~~~~Q~K~Pr~~~~~~~~~~~L 547 (565)
+..+++.+.+.+.|. . -.-|-.|.+|+ .|-..+..-..+..|...+|...+.-+. |++.++.+
T Consensus 578 ~~~~~l~~~~~~~L~--------~--~~~P~~i~~v~~lP~t~sGKi~r~~lr~~~~~~~~~~~~~~~~~~-~~~~~~~~ 646 (655)
T PRK03584 578 ALRARIRTTIRTNLS--------P--RHVPDKIIAVPDIPRTLSGKKVELPVKKLLHGRPVKKAVNRDALA-NPEALDWF 646 (655)
T ss_pred HHHHHHHHHHHhhCC--------C--CcCCCEEEECCCCCCCCCccchHHHHHHHHcCCCCCCCCCccccc-CHHHHHHH
Confidence 222334444444441 0 12344566653 3332221111122466555554555565 88887776
Q ss_pred hc
Q 044130 548 DS 549 (565)
Q Consensus 548 ~~ 549 (565)
.+
T Consensus 647 ~~ 648 (655)
T PRK03584 647 AD 648 (655)
T ss_pred HH
Confidence 43
No 14
>PRK07514 malonyl-CoA synthase; Validated
Probab=98.22 E-value=7.2e-05 Score=81.98 Aligned_cols=133 Identities=11% Similarity=0.136 Sum_probs=87.1
Q ss_pred cCCCCceEEEEEecchh---hhHHHHHHhcCCCCceecccccccceeeeecC--CCCCCCCCceeeecCCceeEEeeeCC
Q 044130 259 LWPRAKYIEAVVTGSMA---QYIPSLEYYSAGKLPLVGTMYASSECYFGVNL--KPLSNPADVSFTLLPNMCYFEFLPLG 333 (565)
Q Consensus 259 lWP~l~~i~~~~~G~~~---~y~~~l~~~~g~~~~~~~~~y~aSEg~~gi~~--~~~~~~~~~~~~l~p~~~ffEFip~~ 333 (565)
..++ +.++++||.. .....+++.++ .+++ ..||+||+.+.... ...+.+...+. .+|+ .....++++
T Consensus 267 ~~~~---lr~~~~gg~~~~~~~~~~~~~~~~--~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~G~-~~~~-~~v~i~d~~ 338 (504)
T PRK07514 267 AAAH---MRLFISGSAPLLAETHREFQERTG--HAIL-ERYGMTETNMNTSNPYDGERRAGTVGF-PLPG-VSLRVTDPE 338 (504)
T ss_pred cccc---eeeEEecCCCCCHHHHHHHHHHhC--Ccce-eecccccccccccCCccccccCccccc-CCCC-cEEEEEECC
Confidence 4566 6677777732 34455666665 6777 89999998542211 11111112221 2233 344555533
Q ss_pred CCCCccccccccccccCCCCceeeccCcccCCeEEEEeccc---cceee--------------eecCCEEEEeeeeCCCC
Q 044130 334 GENGTLLSMEFNEEEEVPNDKLVDLGHVRVGHYYELVVTTF---AGLNR--------------YRIGDVLQVTGFYNRAP 396 (565)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~v~l~eve~G~~YelViTt~---~GLyR--------------YriGDvV~v~gf~~~~P 396 (565)
+ .++ +..|+..||+|++. .|+|+ |++||+++... .-
T Consensus 339 ~------------------~~~-----~~~g~~Gel~i~~~~~~~gy~~~~~~~~~~~~~~~~~~TGDl~~~~~----~g 391 (504)
T PRK07514 339 T------------------GAE-----LPPGEIGMIEVKGPNVFKGYWRMPEKTAEEFRADGFFITGDLGKIDE----RG 391 (504)
T ss_pred C------------------CCC-----CCCCCceEEEEecCCccccccCCchhhhhhcccCCCeeecceEEEcC----Cc
Confidence 2 122 45888999999874 45553 89999999874 23
Q ss_pred EEEEEeecCceeeeeecccCHHHHHHHHHH
Q 044130 397 QFRFICRRNVVLSIDNDKTNEEDLHKSVTI 426 (565)
Q Consensus 397 ~i~F~gR~~~~l~i~GEkl~e~~v~~av~~ 426 (565)
.+.|+||.++++.+.|++++..+|+.++.+
T Consensus 392 ~~~~~GR~~~~i~~~G~~i~~~~IE~~l~~ 421 (504)
T PRK07514 392 YVHIVGRGKDLIISGGYNVYPKEVEGEIDE 421 (504)
T ss_pred cEEEeccccceEEeCCeEECHHHHHHHHHh
Confidence 589999999999999999999999999965
No 15
>PRK09274 peptide synthase; Provisional
Probab=98.16 E-value=0.00012 Score=81.42 Aligned_cols=140 Identities=12% Similarity=0.101 Sum_probs=86.4
Q ss_pred EEEEEecch---hhhHHHHHHhcCCCCceecccccccceeeeecCCCCC------------CCCCceeeecCCceeEEee
Q 044130 266 IEAVVTGSM---AQYIPSLEYYSAGKLPLVGTMYASSECYFGVNLKPLS------------NPADVSFTLLPNMCYFEFL 330 (565)
Q Consensus 266 i~~~~~G~~---~~y~~~l~~~~g~~~~~~~~~y~aSEg~~gi~~~~~~------------~~~~~~~~l~p~~~ffEFi 330 (565)
+..+++||. ...+.++++.++.+++++ ..||+||+....-..... .....+. .+|+. -...+
T Consensus 290 lr~~~~gG~~~~~~~~~~~~~~~~~~~~~~-~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~-~~~~~-~~~iv 366 (552)
T PRK09274 290 LRRVISAGAPVPIAVIERFRAMLPPDAEIL-TPYGATEALPISSIESREILFATRAATDNGAGICVGR-PVDGV-EVRII 366 (552)
T ss_pred hhEEEecCCcCCHHHHHHHHHHcCCCceEE-ccccccccceeEeecchhhhccccccccCCCCcccCc-cCCCc-eEEEE
Confidence 556666663 456678888886337888 999999975311111100 0001111 22332 23444
Q ss_pred eCCCCCCccccccccccccCCCCceeeccCcccCCeEEEEeccc---------------------cceeeeecCCEEEEe
Q 044130 331 PLGGENGTLLSMEFNEEEEVPNDKLVDLGHVRVGHYYELVVTTF---------------------AGLNRYRIGDVLQVT 389 (565)
Q Consensus 331 p~~~~~~~~~~~~~~~~~~~~~~~~v~l~eve~G~~YelViTt~---------------------~GLyRYriGDvV~v~ 389 (565)
+..+.. .+.-=.-.++..|+..||+|... .|-.+|++||++++.
T Consensus 367 d~~~~~---------------~~~~~~~~~~~~g~~Gel~v~g~~~~~GY~~~~~~t~~~~~~~~~g~~w~~TGDlg~~d 431 (552)
T PRK09274 367 AISDAP---------------IPEWDDALRLATGEIGEIVVAGPMVTRSYYNRPEATRLAKIPDGQGDVWHRMGDLGYLD 431 (552)
T ss_pred eccccc---------------cccccccccCCCCCeeEEEEecCcccccccCChHHhhhhhcccCCCCcEEEcCCEEEEc
Confidence 432110 00000123456899999999542 122489999999985
Q ss_pred eeeCCCCEEEEEeecCceeeeeecccCHHHHHHHHHHH
Q 044130 390 GFYNRAPQFRFICRRNVVLSIDNDKTNEEDLHKSVTIA 427 (565)
Q Consensus 390 gf~~~~P~i~F~gR~~~~l~i~GEkl~e~~v~~av~~~ 427 (565)
. -..+.|+||.++++++.|++++..+|+.++.+.
T Consensus 432 ~----dG~l~~~GR~~d~i~~~G~~v~p~eIE~~l~~~ 465 (552)
T PRK09274 432 A----QGRLWFCGRKAHRVETAGGTLYTIPCERIFNTH 465 (552)
T ss_pred c----CCcEEEEeccCCeEEECCEEECcHHHHHHHHhC
Confidence 3 236899999999999999999999999998763
No 16
>PRK05605 long-chain-fatty-acid--CoA ligase; Validated
Probab=98.16 E-value=5.2e-05 Score=84.94 Aligned_cols=130 Identities=18% Similarity=0.220 Sum_probs=84.6
Q ss_pred EEEEEecch---hhhHHHHHHhcCCCCceecccccccceeeeecCCCCC---CCCCceeeecCCceeEEeeeCCCCCCcc
Q 044130 266 IEAVVTGSM---AQYIPSLEYYSAGKLPLVGTMYASSECYFGVNLKPLS---NPADVSFTLLPNMCYFEFLPLGGENGTL 339 (565)
Q Consensus 266 i~~~~~G~~---~~y~~~l~~~~g~~~~~~~~~y~aSEg~~gi~~~~~~---~~~~~~~~l~p~~~ffEFip~~~~~~~~ 339 (565)
+.++++||. ......+++.++ .+++ ..||+||+...+-..+.. .+...+. ..|+. ..+.++.++.
T Consensus 338 lr~i~~gg~~l~~~~~~~~~~~~~--~~i~-~~YG~TE~~~~~~~~~~~~~~~~~~~G~-~~~~~-~~~i~d~~~~---- 408 (573)
T PRK05605 338 VRNAFSGAMALPVSTVELWEKLTG--GLLV-EGYGLTETSPIIVGNPMSDDRRPGYVGV-PFPDT-EVRIVDPEDP---- 408 (573)
T ss_pred ccEEEECCCcCCHHHHHHHHHHhC--CCee-cccccchhchhhhcCCcccCCcCCcccc-CCCCC-EEEEEcCCCC----
Confidence 556666763 344556666565 6777 899999985321111111 1112222 23332 4556654321
Q ss_pred ccccccccccCCCCceeeccCcccCCeEEEEeccc---ccee-------------eeecCCEEEEeeeeCCCCEEEEEee
Q 044130 340 LSMEFNEEEEVPNDKLVDLGHVRVGHYYELVVTTF---AGLN-------------RYRIGDVLQVTGFYNRAPQFRFICR 403 (565)
Q Consensus 340 ~~~~~~~~~~~~~~~~v~l~eve~G~~YelViTt~---~GLy-------------RYriGDvV~v~gf~~~~P~i~F~gR 403 (565)
.. .+..|+..||+|++. .|.| .|++||++++.. + -.+.|+||
T Consensus 409 -------------~~-----~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~--~--g~l~i~gR 466 (573)
T PRK05605 409 -------------DE-----TMPDGEEGELLVRGPQVFKGYWNRPEETAKSFLDGWFRTGDVVVMEE--D--GFIRIVDR 466 (573)
T ss_pred -------------Cc-----cCCCCCeeEEEEecCchhhhhcCChhHhhhcccCCCcccCCEEEEcC--C--CcEEEEec
Confidence 11 245788999999864 3444 499999998863 2 37899999
Q ss_pred cCceeeeeecccCHHHHHHHHHH
Q 044130 404 RNVVLSIDNDKTNEEDLHKSVTI 426 (565)
Q Consensus 404 ~~~~l~i~GEkl~e~~v~~av~~ 426 (565)
.++++++.|++++..+|++++..
T Consensus 467 ~dd~i~~~G~~v~p~eIE~~l~~ 489 (573)
T PRK05605 467 IKELIITGGFNVYPAEVEEVLRE 489 (573)
T ss_pred cccceeeCCEEECHHHHHHHHHh
Confidence 99999999999999999999965
No 17
>PRK10524 prpE propionyl-CoA synthetase; Provisional
Probab=98.16 E-value=0.0002 Score=81.37 Aligned_cols=129 Identities=9% Similarity=0.063 Sum_probs=82.2
Q ss_pred EEEEEecch---hhhHHHHHHhcCCCCceecccccccceeeee-cCCCC-----CCCCCceeeecCCceeEEeeeCCCCC
Q 044130 266 IEAVVTGSM---AQYIPSLEYYSAGKLPLVGTMYASSECYFGV-NLKPL-----SNPADVSFTLLPNMCYFEFLPLGGEN 336 (565)
Q Consensus 266 i~~~~~G~~---~~y~~~l~~~~g~~~~~~~~~y~aSEg~~gi-~~~~~-----~~~~~~~~~l~p~~~ffEFip~~~~~ 336 (565)
+.++++||. ....+.+++.++ ++++ ..||.||+..++ ...+. ..++..+. .+|+.. .+.++.++
T Consensus 357 lr~i~~~Ge~l~~~~~~~~~~~~~--~~v~-~~YG~TE~~~~~~~~~~~~~~~~~~~~~~G~-p~~g~~-~~i~d~~~-- 429 (629)
T PRK10524 357 LRALFLAGEPLDEPTASWISEALG--VPVI-DNYWQTETGWPILAIARGVEDRPTRLGSPGV-PMYGYN-VKLLNEVT-- 429 (629)
T ss_pred eeEEEEeCCCCCHHHHHHHHHhcC--CCeE-eccccccccchhhcCCCCcccCcCCCCCccc-CcCCce-EEEEeCCC--
Confidence 667777773 234456666676 7788 999999985221 11110 00111222 122221 33443211
Q ss_pred CccccccccccccCCCCceeeccCcccCCeEEEEeccc------ccee-----------------eeecCCEEEEeeeeC
Q 044130 337 GTLLSMEFNEEEEVPNDKLVDLGHVRVGHYYELVVTTF------AGLN-----------------RYRIGDVLQVTGFYN 393 (565)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~v~l~eve~G~~YelViTt~------~GLy-----------------RYriGDvV~v~gf~~ 393 (565)
.++ +..|+..||+|+.. .|+| -|++||++++..
T Consensus 430 ----------------g~~-----~~~g~~Gel~i~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGDl~~~d~--- 485 (629)
T PRK10524 430 ----------------GEP-----CGPNEKGVLVIEGPLPPGCMQTVWGDDDRFVKTYWSLFGRQVYSTFDWGIRDA--- 485 (629)
T ss_pred ----------------CCC-----CCCCCcEEEEEcCCCChhhcCCccCChHHHHHhhhccCCCcEEEcCCcEEEcC---
Confidence 222 45889999999864 1222 399999998753
Q ss_pred CCCEEEEEeecCceeeeeecccCHHHHHHHHHH
Q 044130 394 RAPQFRFICRRNVVLSIDNDKTNEEDLHKSVTI 426 (565)
Q Consensus 394 ~~P~i~F~gR~~~~l~i~GEkl~e~~v~~av~~ 426 (565)
--.+.|+||.++++++.|+++...+|+.+|.+
T Consensus 486 -dG~l~i~GR~dd~i~~~G~ri~p~eIE~~l~~ 517 (629)
T PRK10524 486 -DGYYFILGRTDDVINVAGHRLGTREIEESISS 517 (629)
T ss_pred -CCcEEEEEEecCeEEeCCEEeCHHHHHHHHHh
Confidence 23789999999999999999999999999975
No 18
>PRK04319 acetyl-CoA synthetase; Provisional
Probab=98.14 E-value=0.00013 Score=81.96 Aligned_cols=132 Identities=13% Similarity=0.102 Sum_probs=84.9
Q ss_pred CCCCceEEEEEecch---hhhHHHHHHhcCCCCceecccccccceee-e-ecCCC-CCCCCCceeeecCCceeEEeeeCC
Q 044130 260 WPRAKYIEAVVTGSM---AQYIPSLEYYSAGKLPLVGTMYASSECYF-G-VNLKP-LSNPADVSFTLLPNMCYFEFLPLG 333 (565)
Q Consensus 260 WP~l~~i~~~~~G~~---~~y~~~l~~~~g~~~~~~~~~y~aSEg~~-g-i~~~~-~~~~~~~~~~l~p~~~ffEFip~~ 333 (565)
+++ +.++++||. ......+++.+| ++++ ..||+||+.. . .+... ...++..+. .+|+ ...+.++.+
T Consensus 322 ~~~---lr~~~~gG~~l~~~~~~~~~~~~g--~~i~-~~YG~tE~~~~~~~~~~~~~~~~~~~G~-p~~g-~~~~i~d~~ 393 (570)
T PRK04319 322 LSS---LRHILSVGEPLNPEVVRWGMKVFG--LPIH-DNWWMTETGGIMIANYPAMDIKPGSMGK-PLPG-IEAAIVDDQ 393 (570)
T ss_pred ccc---ceEEEEcccCCCHHHHHHHHHHhC--CCeE-eceeecccCCEEEecCCCCCCCCCcCcC-CCCC-CEEEEECCC
Confidence 455 556666662 234556666666 7777 9999999742 2 11110 111222332 2232 234455422
Q ss_pred CCCCccccccccccccCCCCceeeccCcccCCeEEEEeccc-----ccee-------------eeecCCEEEEeeeeCCC
Q 044130 334 GENGTLLSMEFNEEEEVPNDKLVDLGHVRVGHYYELVVTTF-----AGLN-------------RYRIGDVLQVTGFYNRA 395 (565)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~v~l~eve~G~~YelViTt~-----~GLy-------------RYriGDvV~v~gf~~~~ 395 (565)
. . ++.+|+.+||+|+.. .|+| -|++||++++.. .
T Consensus 394 ~-------------------~-----~~~~g~~Gel~i~~~~~~~~~GY~~~~~~~~~~~~~gw~~TGDl~~~~~----~ 445 (570)
T PRK04319 394 G-------------------N-----ELPPNRMGNLAIKKGWPSMMRGIWNNPEKYESYFAGDWYVSGDSAYMDE----D 445 (570)
T ss_pred C-------------------C-----CCCCCCceEEEEcCCCChHHhHhcCCHHHhhhhhcCCceEeCcEEEECC----C
Confidence 1 1 246899999999752 2433 389999999863 2
Q ss_pred CEEEEEeecCceeeeeecccCHHHHHHHHHHH
Q 044130 396 PQFRFICRRNVVLSIDNDKTNEEDLHKSVTIA 427 (565)
Q Consensus 396 P~i~F~gR~~~~l~i~GEkl~e~~v~~av~~~ 427 (565)
-.+.|+||.++++++.|++++..+|+.++.+.
T Consensus 446 g~l~~~GR~~d~i~~~G~~i~p~eIE~~l~~~ 477 (570)
T PRK04319 446 GYFWFQGRVDDVIKTSGERVGPFEVESKLMEH 477 (570)
T ss_pred eeEEEEecCCCEEEECCEEECHHHHHHHHhhC
Confidence 26889999999999999999999999999763
No 19
>PRK09088 acyl-CoA synthetase; Validated
Probab=98.13 E-value=1.4e-05 Score=87.38 Aligned_cols=130 Identities=15% Similarity=0.206 Sum_probs=82.4
Q ss_pred EEEEEecchhhhHHHHHHhcCCCCceecccccccceee--eecCCCC---CCCCCceeeecCCceeEEeeeCCCCCCccc
Q 044130 266 IEAVVTGSMAQYIPSLEYYSAGKLPLVGTMYASSECYF--GVNLKPL---SNPADVSFTLLPNMCYFEFLPLGGENGTLL 340 (565)
Q Consensus 266 i~~~~~G~~~~y~~~l~~~~g~~~~~~~~~y~aSEg~~--gi~~~~~---~~~~~~~~~l~p~~~ffEFip~~~~~~~~~ 340 (565)
+..+++||...-...++++...+++++ ..||+||+.. +++..+. ..++..+. ..|+ ...+.++.+
T Consensus 254 l~~~~~gG~~~~~~~~~~~~~~g~~v~-~~YG~TE~~~~~~~~~~~~~~~~~~~~vG~-~~~~-~~~~i~d~~------- 323 (488)
T PRK09088 254 LTALFTGGAPHAAEDILGWLDDGIPMV-DGFGMSEAGTVFGMSVDCDVIRAKAGAAGI-PTPT-VQTRVVDDQ------- 323 (488)
T ss_pred ceEEEecCCCCCHHHHHHHHHhCCcee-eeecccccccccccCCCcccccccCCcccc-CCCC-cEEEEECCC-------
Confidence 677777874322223333332128888 8999999842 3322211 11112222 2232 345555422
Q ss_pred cccccccccCCCCceeeccCcccCCeEEEEeccc---cceee--------------eecCCEEEEeeeeCCCCEEEEEee
Q 044130 341 SMEFNEEEEVPNDKLVDLGHVRVGHYYELVVTTF---AGLNR--------------YRIGDVLQVTGFYNRAPQFRFICR 403 (565)
Q Consensus 341 ~~~~~~~~~~~~~~~v~l~eve~G~~YelViTt~---~GLyR--------------YriGDvV~v~gf~~~~P~i~F~gR 403 (565)
.. ++..|+..||+|++. .|.|. |++||++++.. ...+.|+||
T Consensus 324 ------------~~-----~~~~g~~Gel~v~~~~~~~gY~~~~~~~~~~~~~~g~~~TGDl~~~~~----~g~l~i~GR 382 (488)
T PRK09088 324 ------------GN-----DCPAGVPGELLLRGPNLSPGYWRRPQATARAFTGDGWFRTGDIARRDA----DGFFWVVDR 382 (488)
T ss_pred ------------CC-----CCcCCCceEEEEECCccchhhcCChhhhhhhhcCCCCeeecceEEEcC----CCcEEEecc
Confidence 11 245788899999874 34432 99999999963 236899999
Q ss_pred cCceeeeeecccCHHHHHHHHHH
Q 044130 404 RNVVLSIDNDKTNEEDLHKSVTI 426 (565)
Q Consensus 404 ~~~~l~i~GEkl~e~~v~~av~~ 426 (565)
.++++.+.|+|++..+|+.++..
T Consensus 383 ~~d~i~~~G~~i~~~~iE~~l~~ 405 (488)
T PRK09088 383 KKDMFISGGENVYPAEIEAVLAD 405 (488)
T ss_pred ccceEEeCCEEECHHHHHHHHHh
Confidence 99999999999999999999865
No 20
>PRK13295 cyclohexanecarboxylate-CoA ligase; Reviewed
Probab=98.13 E-value=2.6e-05 Score=86.96 Aligned_cols=131 Identities=11% Similarity=0.111 Sum_probs=84.5
Q ss_pred CCCCceEEEEEecc---hhhhHHHHHHhcCCCCceecccccccceee-eecCCCC--C-CCCCceeeecCCceeEEeeeC
Q 044130 260 WPRAKYIEAVVTGS---MAQYIPSLEYYSAGKLPLVGTMYASSECYF-GVNLKPL--S-NPADVSFTLLPNMCYFEFLPL 332 (565)
Q Consensus 260 WP~l~~i~~~~~G~---~~~y~~~l~~~~g~~~~~~~~~y~aSEg~~-gi~~~~~--~-~~~~~~~~l~p~~~ffEFip~ 332 (565)
.|+ +.++++|| ....+.++++.++ ++++ ..||+||+.. +...... . .....+. .+|+. -++.++.
T Consensus 311 ~~~---l~~~~~~G~~l~~~~~~~~~~~~~--~~~~-~~YG~TE~~~~~~~~~~~~~~~~~~~~G~-~~~~~-~v~i~d~ 382 (547)
T PRK13295 311 VSS---LRTFLCAGAPIPGALVERARAALG--AKIV-SAWGMTENGAVTLTKLDDPDERASTTDGC-PLPGV-EVRVVDA 382 (547)
T ss_pred ccc---ceEEEEecCCCCHHHHHHHHHHhC--CCeE-EeccCCCCCCeeeccCCCcchhccCcccc-ccCCc-EEEEECC
Confidence 455 56666666 2355677777774 8888 8999999843 2211100 0 0001122 11222 2333332
Q ss_pred CCCCCccccccccccccCCCCceeeccCcccCCeEEEEeccc---ccee-e-----------eecCCEEEEeeeeCCCCE
Q 044130 333 GGENGTLLSMEFNEEEEVPNDKLVDLGHVRVGHYYELVVTTF---AGLN-R-----------YRIGDVLQVTGFYNRAPQ 397 (565)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~v~l~eve~G~~YelViTt~---~GLy-R-----------YriGDvV~v~gf~~~~P~ 397 (565)
+ . .++..|+..||+|+.. .|.| | |++||++++.. ...
T Consensus 383 ~-------------------~-----~~~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~~~g~~~TGD~~~~~~----~g~ 434 (547)
T PRK13295 383 D-------------------G-----APLPAGQIGRLQVRGCSNFGGYLKRPQLNGTDADGWFDTGDLARIDA----DGY 434 (547)
T ss_pred C-------------------C-----CCCCCCCCCeEEEEcCcccccccCCccccccCCCCCeecceEEEEcC----Cce
Confidence 1 1 1245788899999875 3433 2 99999999863 346
Q ss_pred EEEEeecCceeeeeecccCHHHHHHHHHH
Q 044130 398 FRFICRRNVVLSIDNDKTNEEDLHKSVTI 426 (565)
Q Consensus 398 i~F~gR~~~~l~i~GEkl~e~~v~~av~~ 426 (565)
+.|+||.++++++.|+|+...+|+++|.+
T Consensus 435 l~~~gR~~~~i~~~G~~v~p~~IE~~l~~ 463 (547)
T PRK13295 435 IRISGRSKDVIIRGGENIPVVEIEALLYR 463 (547)
T ss_pred EEEEeccCCeEEECCEEECHHHHHHHHHh
Confidence 99999999999999999999999999865
No 21
>PRK06334 long chain fatty acid--[acyl-carrier-protein] ligase; Validated
Probab=98.12 E-value=2.4e-05 Score=87.45 Aligned_cols=131 Identities=16% Similarity=0.122 Sum_probs=84.3
Q ss_pred EEEEEecch---hhhHHHHHHhcCCCCceecccccccceee--eecCCCC-CCCCCceeeecCCceeEEeeeCCCCCCcc
Q 044130 266 IEAVVTGSM---AQYIPSLEYYSAGKLPLVGTMYASSECYF--GVNLKPL-SNPADVSFTLLPNMCYFEFLPLGGENGTL 339 (565)
Q Consensus 266 i~~~~~G~~---~~y~~~l~~~~g~~~~~~~~~y~aSEg~~--gi~~~~~-~~~~~~~~~l~p~~~ffEFip~~~~~~~~ 339 (565)
+..+++||. ....+++++.+++ ++++ ..||+||+.. ..+.... ..+...+.. +|+.. ...++.+.
T Consensus 301 lr~i~~gG~~l~~~~~~~~~~~~~~-~~i~-~~YG~TE~~~~~~~~~~~~~~~~~~vG~p-~~g~~-v~i~d~~~----- 371 (539)
T PRK06334 301 LRFVVIGGDAFKDSLYQEALKTFPH-IQLR-QGYGTTECSPVITINTVNSPKHESCVGMP-IRGMD-VLIVSEET----- 371 (539)
T ss_pred ccEEEECCccCCHHHHHHHHHHCCC-CeEE-ecccccccCceEEeccCCCCCCCCcCcee-cCCCE-EEEEcCCC-----
Confidence 566677773 3456777777776 8888 8999999842 3221110 011112322 23221 11222111
Q ss_pred ccccccccccCCCCceeeccCcccCCeEEEEeccc---ccee---------------eeecCCEEEEeeeeCCCCEEEEE
Q 044130 340 LSMEFNEEEEVPNDKLVDLGHVRVGHYYELVVTTF---AGLN---------------RYRIGDVLQVTGFYNRAPQFRFI 401 (565)
Q Consensus 340 ~~~~~~~~~~~~~~~~v~l~eve~G~~YelViTt~---~GLy---------------RYriGDvV~v~gf~~~~P~i~F~ 401 (565)
.. .+..|+..||+|... .|.| -|++||++++.. .-.+.|+
T Consensus 372 -------------~~-----~~~~g~~Gel~v~g~~~~~GY~~~~~~~~~~~~~~~~w~~TGD~g~~d~----~G~l~~~ 429 (539)
T PRK06334 372 -------------KV-----PVSSGETGLVLTRGTSLFSGYLGEDFGQGFVELGGETWYVTGDLGYVDR----HGELFLK 429 (539)
T ss_pred -------------Cc-----cCCCCceEEEEEecCcccccccCCcccccceeeCCceeEECCCEEEECC----CCeEEEE
Confidence 11 245889999999654 2322 399999998863 3368899
Q ss_pred eecCceeeeeecccCHHHHHHHHHHH
Q 044130 402 CRRNVVLSIDNDKTNEEDLHKSVTIA 427 (565)
Q Consensus 402 gR~~~~l~i~GEkl~e~~v~~av~~~ 427 (565)
||.++++++.|++++..+|+.++...
T Consensus 430 GR~~d~ik~~G~~v~p~eIE~~l~~~ 455 (539)
T PRK06334 430 GRLSRFVKIGAEMVSLEALESILMEG 455 (539)
T ss_pred eccCCeEEECCEEECHHHHHHHHHHc
Confidence 99999999999999999999999764
No 22
>PRK05677 long-chain-fatty-acid--CoA ligase; Validated
Probab=98.11 E-value=9e-05 Score=82.97 Aligned_cols=128 Identities=13% Similarity=0.217 Sum_probs=84.1
Q ss_pred EEEEEecch---hhhHHHHHHhcCCCCceecccccccceeeeecCCCC--CCCCCceeeecCCceeEEeeeCCCCCCccc
Q 044130 266 IEAVVTGSM---AQYIPSLEYYSAGKLPLVGTMYASSECYFGVNLKPL--SNPADVSFTLLPNMCYFEFLPLGGENGTLL 340 (565)
Q Consensus 266 i~~~~~G~~---~~y~~~l~~~~g~~~~~~~~~y~aSEg~~gi~~~~~--~~~~~~~~~l~p~~~ffEFip~~~~~~~~~ 340 (565)
+.+++.||. ..-.+++++.++ ++++ ..||+||+...+...+. ..++..+. .+|+ ...+.++.+
T Consensus 328 lr~v~~gG~~~~~~~~~~~~~~~~--~~v~-~~YG~tE~~~~~~~~~~~~~~~~~vG~-~~~~-~~v~i~d~~------- 395 (562)
T PRK05677 328 LKLTLSGGMALQLATAERWKEVTG--CAIC-EGYGMTETSPVVSVNPSQAIQVGTIGI-PVPS-TLCKVIDDD------- 395 (562)
T ss_pred ceEEEEcCccCCHHHHHHHHHHcC--CCee-ccCCccccCcceeecCccCCCCCccCc-cCCC-CEEEEECCC-------
Confidence 666677773 344566666665 7888 99999998432222111 11222332 2233 244555422
Q ss_pred cccccccccCCCCceeeccCcccCCeEEEEeccc---ccee--------------eeecCCEEEEeeeeCCCCEEEEEee
Q 044130 341 SMEFNEEEEVPNDKLVDLGHVRVGHYYELVVTTF---AGLN--------------RYRIGDVLQVTGFYNRAPQFRFICR 403 (565)
Q Consensus 341 ~~~~~~~~~~~~~~~v~l~eve~G~~YelViTt~---~GLy--------------RYriGDvV~v~gf~~~~P~i~F~gR 403 (565)
.. .|..|+..||+|++. .|.| -|++||+.++.. + -.+.|.||
T Consensus 396 ------------~~-----~~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~~~~~g~~~TGDlg~~~~--~--G~l~i~GR 454 (562)
T PRK05677 396 ------------GN-----ELPLGEVGELCVKGPQVMKGYWQRPEATDEILDSDGWLKTGDIALIQE--D--GYMRIVDR 454 (562)
T ss_pred ------------CC-----CCCCCCCeEEEEecCccchhhcCCchhhhhccCCCCcccccceEEECC--C--CcEEEEec
Confidence 11 245788999999763 2322 289999998874 2 35889999
Q ss_pred cCceeeeeecccCHHHHHHHHHH
Q 044130 404 RNVVLSIDNDKTNEEDLHKSVTI 426 (565)
Q Consensus 404 ~~~~l~i~GEkl~e~~v~~av~~ 426 (565)
.++++++.|++++..+|+.++..
T Consensus 455 ~~d~i~~~G~~i~p~eiE~~l~~ 477 (562)
T PRK05677 455 KKDMILVSGFNVYPNELEDVLAA 477 (562)
T ss_pred CcCeEEeCCEEECHHHHHHHHHh
Confidence 99999999999999999999965
No 23
>PRK08974 long-chain-fatty-acid--CoA ligase; Validated
Probab=98.09 E-value=0.00012 Score=81.69 Aligned_cols=128 Identities=17% Similarity=0.238 Sum_probs=83.2
Q ss_pred EEEEEecchh---hhHHHHHHhcCCCCceecccccccceeeeecCCCC---CCCCCceeeecCCceeEEeeeCCCCCCcc
Q 044130 266 IEAVVTGSMA---QYIPSLEYYSAGKLPLVGTMYASSECYFGVNLKPL---SNPADVSFTLLPNMCYFEFLPLGGENGTL 339 (565)
Q Consensus 266 i~~~~~G~~~---~y~~~l~~~~g~~~~~~~~~y~aSEg~~gi~~~~~---~~~~~~~~~l~p~~~ffEFip~~~~~~~~ 339 (565)
+.++++||.. .-..++++.+| ++++ ..||+||+...+-.... ..+...+.. +|+ .-.+.++.+
T Consensus 327 lr~~~~gg~~~~~~~~~~~~~~~g--~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~G~~-~~~-~~~~i~~~~------ 395 (560)
T PRK08974 327 LKLSVGGGMAVQQAVAERWVKLTG--QYLL-EGYGLTECSPLVSVNPYDLDYYSGSIGLP-VPS-TEIKLVDDD------ 395 (560)
T ss_pred eeEEEecCccCCHHHHHHHHHHhC--CcEE-eeecccccCceeeccCCCCcccCCccccC-cCC-CEEEEECCC------
Confidence 5677777732 33455666665 7888 89999997432211111 001122322 222 234444422
Q ss_pred ccccccccccCCCCceeeccCcccCCeEEEEeccc---cceee-------------eecCCEEEEeeeeCCCCEEEEEee
Q 044130 340 LSMEFNEEEEVPNDKLVDLGHVRVGHYYELVVTTF---AGLNR-------------YRIGDVLQVTGFYNRAPQFRFICR 403 (565)
Q Consensus 340 ~~~~~~~~~~~~~~~~v~l~eve~G~~YelViTt~---~GLyR-------------YriGDvV~v~gf~~~~P~i~F~gR 403 (565)
.. ++..|+.+||+|++. .|.|. |++||+++... .-.+.|+||
T Consensus 396 -------------~~-----~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~g~~~TGDl~~~~~----~g~l~i~GR 453 (560)
T PRK08974 396 -------------GN-----EVPPGEPGELWVKGPQVMLGYWQRPEATDEVIKDGWLATGDIAVMDE----EGFLRIVDR 453 (560)
T ss_pred -------------CC-----CCCCCCceEEEEecCCcchhhcCChhhhhhhhhcCCcccCCEEEEcC----CceEEEEec
Confidence 11 245788999999764 34332 99999999853 236899999
Q ss_pred cCceeeeeecccCHHHHHHHHHH
Q 044130 404 RNVVLSIDNDKTNEEDLHKSVTI 426 (565)
Q Consensus 404 ~~~~l~i~GEkl~e~~v~~av~~ 426 (565)
.++++.+.|++++..+|+.+|..
T Consensus 454 ~~d~i~~~G~~i~~~~IE~~l~~ 476 (560)
T PRK08974 454 KKDMILVSGFNVYPNEIEDVVML 476 (560)
T ss_pred ccceEEeCCEEECHHHHHHHHHh
Confidence 99999999999999999999965
No 24
>PRK07867 acyl-CoA synthetase; Validated
Probab=98.08 E-value=2.7e-05 Score=86.69 Aligned_cols=132 Identities=15% Similarity=0.134 Sum_probs=80.2
Q ss_pred EEEEEecc-hhhhHHHHHHhcCCCCceecccccccceeeeecCCCCCCCCCceeeecCCceeEEeeeCCCCCCccccccc
Q 044130 266 IEAVVTGS-MAQYIPSLEYYSAGKLPLVGTMYASSECYFGVNLKPLSNPADVSFTLLPNMCYFEFLPLGGENGTLLSMEF 344 (565)
Q Consensus 266 i~~~~~G~-~~~y~~~l~~~~g~~~~~~~~~y~aSEg~~gi~~~~~~~~~~~~~~l~p~~~ffEFip~~~~~~~~~~~~~ 344 (565)
+.++.+|. ..+-..++.+.+| ++++ ..||+||+.+.+...+..+++..+. ..|+ .+.+..+..+
T Consensus 269 lr~~~gg~~~~~~~~~~~~~~g--~~l~-~~YG~TE~~~~~~~~~~~~~~~~g~-~~~~---~~i~~~~~~~-------- 333 (529)
T PRK07867 269 LRIVYGNEGAPGDIARFARRFG--CVVV-DGFGSTEGGVAITRTPDTPPGALGP-LPPG---VAIVDPDTGT-------- 333 (529)
T ss_pred eEEEecCCCChHHHHHHHHHhC--CcEE-EeecccccccccccCCCCCCCCcCC-CCCC---EEEEECCCCC--------
Confidence 34444343 3333456666665 7888 8999999854332222212222222 1233 5666533211
Q ss_pred cccccCCCCceeeccC-------cccCCeEEEEe-cc---cccee-------------eeecCCEEEEeeeeCCCCEEEE
Q 044130 345 NEEEEVPNDKLVDLGH-------VRVGHYYELVV-TT---FAGLN-------------RYRIGDVLQVTGFYNRAPQFRF 400 (565)
Q Consensus 345 ~~~~~~~~~~~v~l~e-------ve~G~~YelVi-Tt---~~GLy-------------RYriGDvV~v~gf~~~~P~i~F 400 (565)
++...+ ...|..+||++ .. ..|+| +|++||++++.. + -.+.|
T Consensus 334 ----------~~~~g~~~~~~~~~~~~~~Gel~i~~g~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~--~--g~l~~ 399 (529)
T PRK07867 334 ----------ECPPAEDADGRLLNADEAIGELVNTAGPGGFEGYYNDPEADAERMRGGVYWSGDLAYRDA--D--GYAYF 399 (529)
T ss_pred ----------CCCCCccccccccccCCcceEEEEecCCcccccccCChHhhhhhhcCCeEeeccEEEEeC--C--CcEEE
Confidence 111111 01122788988 33 24554 899999988863 2 36899
Q ss_pred EeecCceeeeeecccCHHHHHHHHHH
Q 044130 401 ICRRNVVLSIDNDKTNEEDLHKSVTI 426 (565)
Q Consensus 401 ~gR~~~~l~i~GEkl~e~~v~~av~~ 426 (565)
+||.++++++.|+|+.+.+|+.++.+
T Consensus 400 ~GR~~d~i~~~G~~v~p~eIE~~l~~ 425 (529)
T PRK07867 400 AGRLGDWMRVDGENLGTAPIERILLR 425 (529)
T ss_pred eccccCeEEECCEEeCHHHHHHHHHh
Confidence 99999999999999999999999975
No 25
>TIGR01734 D-ala-DACP-lig D-alanine--poly(phosphoribitol) ligase, subunit 1. This model represents the enzyme (also called D-alanine-D-alanyl carrier protein ligase) which activates D-alanine as an adenylate via the reaction D-ala + ATP - D-ala-AMP + PPi, and further catalyzes the condensation of the amino acid adenylate with the D-alanyl carrier protein (D-ala-ACP). The D-alanine is then further transferred to teichoic acid in the biosynthesis of lipoteichoic acid (LTA) and wall teichoic acid (WTA) in gram positive bacteria, both polysacchatides.
Probab=98.07 E-value=0.00022 Score=78.13 Aligned_cols=62 Identities=21% Similarity=0.291 Sum_probs=51.4
Q ss_pred cccCCeEEEEeccc---ccee-----------------eeecCCEEEEeeeeCCCCEEEEEeecCceeeeeecccCHHHH
Q 044130 361 VRVGHYYELVVTTF---AGLN-----------------RYRIGDVLQVTGFYNRAPQFRFICRRNVVLSIDNDKTNEEDL 420 (565)
Q Consensus 361 ve~G~~YelViTt~---~GLy-----------------RYriGDvV~v~gf~~~~P~i~F~gR~~~~l~i~GEkl~e~~v 420 (565)
+.+|+..||++++. .|.| -|++||+.++.. + .+.|+||.++++++.|+|++..+|
T Consensus 337 ~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~~~~~~TGDlg~~~~---~--~l~i~GR~~d~i~~~G~~v~~~~I 411 (502)
T TIGR01734 337 LPEGEKGEIVIVGPSVSKGYLNNPEKTAEAFFSHEGQPAYRTGDAGTITD---G--QLFYQGRLDFQIKLHGYRIELEDI 411 (502)
T ss_pred CCCCCeeEEEEccccccccccCCcccchHhheeCCCcEEEECCCEEEEEC---C--EEEEeccccCeEEECcEEeCHHHH
Confidence 45788899999763 2221 389999999873 3 999999999999999999999999
Q ss_pred HHHHHHH
Q 044130 421 HKSVTIA 427 (565)
Q Consensus 421 ~~av~~~ 427 (565)
++++.+.
T Consensus 412 E~~l~~~ 418 (502)
T TIGR01734 412 EFNLRQS 418 (502)
T ss_pred HHHHHcC
Confidence 9999763
No 26
>PRK07788 acyl-CoA synthetase; Validated
Probab=98.07 E-value=0.00011 Score=82.01 Aligned_cols=128 Identities=13% Similarity=0.078 Sum_probs=82.8
Q ss_pred EEEEEecch---hhhHHHHHHhcCCCCceecccccccceeeeecCCCC---CCCCCceeeecCCceeEEeeeCCCCCCcc
Q 044130 266 IEAVVTGSM---AQYIPSLEYYSAGKLPLVGTMYASSECYFGVNLKPL---SNPADVSFTLLPNMCYFEFLPLGGENGTL 339 (565)
Q Consensus 266 i~~~~~G~~---~~y~~~l~~~~g~~~~~~~~~y~aSEg~~gi~~~~~---~~~~~~~~~l~p~~~ffEFip~~~~~~~~ 339 (565)
+..++.||. ...++++++.+| .+++ ..||+||+.+..-..+. ..+...+. .+|+. -++.++.+
T Consensus 325 lr~i~~gG~~l~~~~~~~~~~~~~--~~l~-~~YG~TE~~~~~~~~~~~~~~~~~~vG~-~~~~~-~~~i~d~~------ 393 (549)
T PRK07788 325 LKIIFVSGSALSPELATRALEAFG--PVLY-NLYGSTEVAFATIATPEDLAEAPGTVGR-PPKGV-TVKILDEN------ 393 (549)
T ss_pred eeEEEEeCCCCCHHHHHHHHHHhC--ccce-eccCcchhchhhccChhhhhhcCCCccc-CCCCc-EEEEECCC------
Confidence 666677763 345566777776 5677 89999997432111110 01112222 22332 34444422
Q ss_pred ccccccccccCCCCceeeccCcccCCeEEEEeccccceee-------------eecCCEEEEeeeeCCCCEEEEEeecCc
Q 044130 340 LSMEFNEEEEVPNDKLVDLGHVRVGHYYELVVTTFAGLNR-------------YRIGDVLQVTGFYNRAPQFRFICRRNV 406 (565)
Q Consensus 340 ~~~~~~~~~~~~~~~~v~l~eve~G~~YelViTt~~GLyR-------------YriGDvV~v~gf~~~~P~i~F~gR~~~ 406 (565)
.+ .+..|+..||+|++..-+-+ |++||++++.. .-.+.|+||.++
T Consensus 394 -------------~~-----~~~~g~~Gel~v~g~~~~~gY~~~~~~~~~~g~~~TGDl~~~~~----~g~l~~~GR~dd 451 (549)
T PRK07788 394 -------------GN-----EVPRGVVGRIFVGNGFPFEGYTDGRDKQIIDGLLSSGDVGYFDE----DGLLFVDGRDDD 451 (549)
T ss_pred -------------cC-----CCCCCCeEEEEEeCCCccccccCCCcccccCCceecCceEEEcC----CCCEEEeccCcc
Confidence 12 24579999999987633322 68999987753 347899999999
Q ss_pred eeeeeecccCHHHHHHHHHH
Q 044130 407 VLSIDNDKTNEEDLHKSVTI 426 (565)
Q Consensus 407 ~l~i~GEkl~e~~v~~av~~ 426 (565)
++.+.|++++..+|+.++.+
T Consensus 452 ~i~~~G~~v~p~eIE~~l~~ 471 (549)
T PRK07788 452 MIVSGGENVFPAEVEDLLAG 471 (549)
T ss_pred eEEECCEEECHHHHHHHHHh
Confidence 99999999999999999975
No 27
>PLN02574 4-coumarate--CoA ligase-like
Probab=98.07 E-value=0.00018 Score=80.65 Aligned_cols=130 Identities=16% Similarity=0.202 Sum_probs=84.1
Q ss_pred EEEEEecch---hhhHHHHHHhcCCCCceecccccccceee-eec-CCCC--CCCCCceeeecCCceeEEeeeCCCCCCc
Q 044130 266 IEAVVTGSM---AQYIPSLEYYSAGKLPLVGTMYASSECYF-GVN-LKPL--SNPADVSFTLLPNMCYFEFLPLGGENGT 338 (565)
Q Consensus 266 i~~~~~G~~---~~y~~~l~~~~g~~~~~~~~~y~aSEg~~-gi~-~~~~--~~~~~~~~~l~p~~~ffEFip~~~~~~~ 338 (565)
+.++.+||. ...++++++.+++ ++++ ..||+||+.. ... .... ..+...+. ..|+ .-.+.+++++
T Consensus 321 lr~~~~gg~~l~~~~~~~~~~~~~~-~~v~-~~YG~tE~~~~~~~~~~~~~~~~~~~vG~-~~~~-~~v~i~d~~~---- 392 (560)
T PLN02574 321 LKQVSCGAAPLSGKFIQDFVQTLPH-VDFI-QGYGMTESTAVGTRGFNTEKLSKYSSVGL-LAPN-MQAKVVDWST---- 392 (560)
T ss_pred ceEEEEecccCCHHHHHHHHHHCCC-CcEE-ecccccccCceeecCCCccccCCCCceee-eCCC-cEEEEEeCCC----
Confidence 455566652 3455667777766 8888 8999999742 211 1111 11112222 2333 2344454332
Q ss_pred cccccccccccCCCCceeeccCcccCCeEEEEeccc---ccee--------------eeecCCEEEEeeeeCCCCEEEEE
Q 044130 339 LLSMEFNEEEEVPNDKLVDLGHVRVGHYYELVVTTF---AGLN--------------RYRIGDVLQVTGFYNRAPQFRFI 401 (565)
Q Consensus 339 ~~~~~~~~~~~~~~~~~v~l~eve~G~~YelViTt~---~GLy--------------RYriGDvV~v~gf~~~~P~i~F~ 401 (565)
.+ .+..|+..||+|+.. .|.| -|++||+.++.. --.+.|+
T Consensus 393 --------------g~-----~~~~g~~Gei~v~g~~~~~GY~~~~~~t~~~~~~~g~~~TGDlg~~~~----~G~l~i~ 449 (560)
T PLN02574 393 --------------GC-----LLPPGNCGELWIQGPGVMKGYLNNPKATQSTIDKDGWLRTGDIAYFDE----DGYLYIV 449 (560)
T ss_pred --------------Cc-----CCCCCCCeEEEEECcchhhhhcCChhHhhhhccCCCCcccceEEEEEC----CCeEEEE
Confidence 12 245899999999863 2222 289999999863 2368899
Q ss_pred eecCceeeeeecccCHHHHHHHHHH
Q 044130 402 CRRNVVLSIDNDKTNEEDLHKSVTI 426 (565)
Q Consensus 402 gR~~~~l~i~GEkl~e~~v~~av~~ 426 (565)
||.++++.+.|++++..+|+.++..
T Consensus 450 GR~~d~i~~~G~~v~~~eiE~~l~~ 474 (560)
T PLN02574 450 DRLKEIIKYKGFQIAPADLEAVLIS 474 (560)
T ss_pred ecchhheEECCEEECHHHHHHHHHh
Confidence 9999999999999999999998865
No 28
>PRK07786 long-chain-fatty-acid--CoA ligase; Validated
Probab=98.02 E-value=3.9e-05 Score=85.43 Aligned_cols=129 Identities=11% Similarity=0.129 Sum_probs=86.3
Q ss_pred EEEEEecch---hhhHHHHHHhcCCCCceecccccccceee-eecCCCC---CCCCCceeeecCCceeEEeeeCCCCCCc
Q 044130 266 IEAVVTGSM---AQYIPSLEYYSAGKLPLVGTMYASSECYF-GVNLKPL---SNPADVSFTLLPNMCYFEFLPLGGENGT 338 (565)
Q Consensus 266 i~~~~~G~~---~~y~~~l~~~~g~~~~~~~~~y~aSEg~~-gi~~~~~---~~~~~~~~~l~p~~~ffEFip~~~~~~~ 338 (565)
+.++++||. ...++.+++.+++ ++++ ..||+||+.. +...... ..+...+.. +|+ ...+.++.+
T Consensus 292 lr~i~~gg~~~~~~~~~~~~~~~~~-~~l~-~~YG~tE~~~~~~~~~~~~~~~~~~~~G~~-~~~-~~~~i~d~~----- 362 (542)
T PRK07786 292 LRVLSWGAAPASDTLLRQMAATFPE-AQIL-AAFGQTEMSPVTCMLLGEDAIRKLGSVGKV-IPT-VAARVVDEN----- 362 (542)
T ss_pred eEEEEECCCCCCHHHHHHHHHHcCC-CeEE-eeecccccccceEecCcccccccCCCcccc-CCC-ceEEEECCC-----
Confidence 667777762 3567788888876 8888 9999999842 2111110 001112221 232 345555522
Q ss_pred cccccccccccCCCCceeeccCcccCCeEEEEeccc---ccee-------------eeecCCEEEEeeeeCCCCEEEEEe
Q 044130 339 LLSMEFNEEEEVPNDKLVDLGHVRVGHYYELVVTTF---AGLN-------------RYRIGDVLQVTGFYNRAPQFRFIC 402 (565)
Q Consensus 339 ~~~~~~~~~~~~~~~~~v~l~eve~G~~YelViTt~---~GLy-------------RYriGDvV~v~gf~~~~P~i~F~g 402 (565)
.. ++..|+.+||++... .|+| +|++||+++... .-.+.|+|
T Consensus 363 --------------~~-----~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~f~~~~~~TGDl~~~~~----~g~~~i~G 419 (542)
T PRK07786 363 --------------MN-----DVPVGEVGEIVYRAPTLMSGYWNNPEATAEAFAGGWFHSGDLVRQDE----EGYVWVVD 419 (542)
T ss_pred --------------CC-----CCcCCCceEEEEEChhhhhhhcCCHHHHHHHhhCCcccccceEEEcC----CceEEEEe
Confidence 11 245788899999654 3444 399999999864 23689999
Q ss_pred ecCceeeeeecccCHHHHHHHHHH
Q 044130 403 RRNVVLSIDNDKTNEEDLHKSVTI 426 (565)
Q Consensus 403 R~~~~l~i~GEkl~e~~v~~av~~ 426 (565)
|.++++.+.|+++...+|+.+|.+
T Consensus 420 R~~d~i~~~G~~v~~~eiE~~l~~ 443 (542)
T PRK07786 420 RKKDMIISGGENIYCAEVENVLAS 443 (542)
T ss_pred cccceEEeCCEEECHHHHHHHHHh
Confidence 999999999999999999999965
No 29
>TIGR01217 ac_ac_CoA_syn acetoacetyl-CoA synthase. This enzyme catalyzes the first step of the mevalonate pathway of IPP biosynthesis. Most bacteria do not use this pathway, but rather the deoxyxylulose pathway.
Probab=98.01 E-value=0.0004 Score=79.65 Aligned_cols=61 Identities=20% Similarity=0.219 Sum_probs=49.8
Q ss_pred cCCeEEEEeccc-----ccee------e------------eecCCEEEEeeeeCCCCEEEEEeecCceeeeeecccCHHH
Q 044130 363 VGHYYELVVTTF-----AGLN------R------------YRIGDVLQVTGFYNRAPQFRFICRRNVVLSIDNDKTNEED 419 (565)
Q Consensus 363 ~G~~YelViTt~-----~GLy------R------------YriGDvV~v~gf~~~~P~i~F~gR~~~~l~i~GEkl~e~~ 419 (565)
.|+..||+|+.. .|+| | |++||++++.. + -.+.|+||.++++++.|+++...+
T Consensus 461 ~g~~GEl~v~gp~p~~~~gy~~~~~~t~~~~~~~~~~~g~~~tGDlg~~d~--d--G~l~i~GR~dd~I~~~G~ri~p~E 536 (652)
T TIGR01217 461 TGEVGELVCTNPMPSMPIRFWNDPDGSKYRDAYFDTYPGVWRHGDWITLTP--R--GGIVIHGRSDSTLNPQGVRMGSAE 536 (652)
T ss_pred CCCccEEEEecCCCccccceeCCCccchhHHhhhcCCCCEEEcCCcEEECC--C--CcEEEEecccCeEecCCEEcCHHH
Confidence 488899999763 2333 1 78899999874 2 368999999999999999999999
Q ss_pred HHHHHHHH
Q 044130 420 LHKSVTIA 427 (565)
Q Consensus 420 v~~av~~~ 427 (565)
|+.+|.+.
T Consensus 537 IE~~l~~~ 544 (652)
T TIGR01217 537 IYNAVERL 544 (652)
T ss_pred HHHHHHhC
Confidence 99999763
No 30
>PRK05852 acyl-CoA synthetase; Validated
Probab=98.00 E-value=0.00033 Score=77.74 Aligned_cols=134 Identities=13% Similarity=0.117 Sum_probs=84.9
Q ss_pred cCCCCceEEEEEecch---hhhHHHHHHhcCCCCceecccccccceeeeecCCCC-------CCCCCceeeecCCceeEE
Q 044130 259 LWPRAKYIEAVVTGSM---AQYIPSLEYYSAGKLPLVGTMYASSECYFGVNLKPL-------SNPADVSFTLLPNMCYFE 328 (565)
Q Consensus 259 lWP~l~~i~~~~~G~~---~~y~~~l~~~~g~~~~~~~~~y~aSEg~~gi~~~~~-------~~~~~~~~~l~p~~~ffE 328 (565)
-+|+ +..+.+||. ...++.+++.++ ++++ .+||.||+...+-..+. .+....+..-.+..+-.+
T Consensus 293 ~~~~---lr~i~~~G~~~~~~~~~~~~~~~~--~~v~-~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~g~~~~ 366 (534)
T PRK05852 293 KPAA---LRFIRSCSAPLTAETAQALQTEFA--APVV-CAFGMTEATHQVTTTQIEGIGQTENPVVSTGLVGRSTGAQIR 366 (534)
T ss_pred cCCC---eeEEEECCCCCCHHHHHHHHHHhC--CChh-hccCccccchhhhcCCccccccccCcccccccCCCCCCCeEE
Confidence 3566 566666652 345567777776 7787 79999997422111100 000011221001222344
Q ss_pred eeeCCCCCCccccccccccccCCCCceeeccCcccCCeEEEEecccc---cee-------------eeecCCEEEEeeee
Q 044130 329 FLPLGGENGTLLSMEFNEEEEVPNDKLVDLGHVRVGHYYELVVTTFA---GLN-------------RYRIGDVLQVTGFY 392 (565)
Q Consensus 329 Fip~~~~~~~~~~~~~~~~~~~~~~~~v~l~eve~G~~YelViTt~~---GLy-------------RYriGDvV~v~gf~ 392 (565)
.++.+ .+ ++.+|+..||+|+... |.| .|++||+.++..
T Consensus 367 i~d~~-------------------g~-----~~~~g~~Gel~v~g~~v~~gY~~~~~~t~~~~~~g~~~TGD~~~~d~-- 420 (534)
T PRK05852 367 IVGSD-------------------GL-----PLPAGAVGEVWLRGTTVVRGYLGDPTITAANFTDGWLRTGDLGSLSA-- 420 (534)
T ss_pred EECCC-------------------CC-----CCCCCCceEEEEecCcccchhcCCcccchhhhcCCCcccCceEEEeC--
Confidence 45422 11 2458889999997752 333 288999998863
Q ss_pred CCCCEEEEEeecCceeeeeecccCHHHHHHHHHH
Q 044130 393 NRAPQFRFICRRNVVLSIDNDKTNEEDLHKSVTI 426 (565)
Q Consensus 393 ~~~P~i~F~gR~~~~l~i~GEkl~e~~v~~av~~ 426 (565)
--.+.|+||.++++++.|+++...+|+.++.+
T Consensus 421 --dG~l~~~gR~~d~i~~~G~~v~~~~iE~~l~~ 452 (534)
T PRK05852 421 --AGDLSIRGRIKELINRGGEKISPERVEGVLAS 452 (534)
T ss_pred --CCcEEEEecchhhEEECCEEECHHHHHHHHHh
Confidence 22689999999999999999999999999965
No 31
>TIGR03205 pimA dicarboxylate--CoA ligase PimA. PimA, a member of a large family of acyl-CoA ligases, is found in a characteristic operon pimFABCDE for the metabolism of pimelate and related compounds. It is found, so far, in Bradyrhizobium japonicum and several strains of Rhodopseudomonas palustris. PimA from R. palustris was shown to be active as a CoA ligase for C(7) to C(14) dicarboxylates and fatty acids.
Probab=97.99 E-value=5.3e-05 Score=84.24 Aligned_cols=130 Identities=16% Similarity=0.255 Sum_probs=84.2
Q ss_pred EEEEEecch---hhhHHHHHHhcCCCCceecccccccceee-eecCCC--CCCCCCceeeecCCceeEEeeeCCCCCCcc
Q 044130 266 IEAVVTGSM---AQYIPSLEYYSAGKLPLVGTMYASSECYF-GVNLKP--LSNPADVSFTLLPNMCYFEFLPLGGENGTL 339 (565)
Q Consensus 266 i~~~~~G~~---~~y~~~l~~~~g~~~~~~~~~y~aSEg~~-gi~~~~--~~~~~~~~~~l~p~~~ffEFip~~~~~~~~ 339 (565)
+.+++.||. ......+++.++ ++++ ..||.||+.. +..... ...++..++.+ |+. -++.+..++.
T Consensus 314 l~~i~~gg~~~~~~~~~~~~~~~~--~~~~-~~YG~TE~~~~~~~~~~~~~~~~~~~G~~~-~~~-~~~v~~~d~~---- 384 (541)
T TIGR03205 314 LATIGSGGAPLPVEVANFFERKTG--LKLK-SGWGMTETCSPGTGHPPEGPDKPGSIGLML-PGI-ELDVVSLDDP---- 384 (541)
T ss_pred cceEEEccccCCHHHHHHHHHHhC--CCee-cccccccCCcccccCCCCCCCCCCCcceec-cCc-eeEEEecCCC----
Confidence 566777763 234456666665 7888 9999999843 211111 11122334432 322 2333333321
Q ss_pred ccccccccccCCCCceeeccCcccCCeEEEEeccc---ccee-------------eeecCCEEEEeeeeCCCCEEEEEee
Q 044130 340 LSMEFNEEEEVPNDKLVDLGHVRVGHYYELVVTTF---AGLN-------------RYRIGDVLQVTGFYNRAPQFRFICR 403 (565)
Q Consensus 340 ~~~~~~~~~~~~~~~~v~l~eve~G~~YelViTt~---~GLy-------------RYriGDvV~v~gf~~~~P~i~F~gR 403 (565)
.+ .+..|+.+||++++. .|+| ||++||+.++.. + -.+.|+||
T Consensus 385 -------------~~-----~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~TGD~~~~~~--~--g~l~i~GR 442 (541)
T TIGR03205 385 -------------TK-----VLPPGEVGELRIRGPNVTRGYWNRPEESAEAFVGDRFLTGDIGYMDT--D--GYFFLVDR 442 (541)
T ss_pred -------------Cc-----cCCCCCeeEEEEecCCccccccCChhhhHhhhccCCcccCceEEEcC--C--ceEEEEcc
Confidence 12 245788999999873 3443 689999999863 2 36889999
Q ss_pred cCceeeeeecccCHHHHHHHHHH
Q 044130 404 RNVVLSIDNDKTNEEDLHKSVTI 426 (565)
Q Consensus 404 ~~~~l~i~GEkl~e~~v~~av~~ 426 (565)
.++++.+.|+++++.+|+.++.+
T Consensus 443 ~~~~i~~~G~~i~~~eIE~~l~~ 465 (541)
T TIGR03205 443 KKDMIISGGFNVYPQMIEQAIYE 465 (541)
T ss_pred ccCeEEECCEEECHHHHHHHHHh
Confidence 99999999999999999999975
No 32
>TIGR01733 AA-adenyl-dom amino acid adenylation domain. This domain is a subset of the AMP-binding domain found in Pfam (pfam00501) which also hits substrate--CoA ligases and luciferases. Sequences scoring in between trusted and noise for this model may be ambiguous as to whether they activate amino acids or other molecules lacking an alpha amino group.
Probab=97.98 E-value=6.3e-05 Score=79.79 Aligned_cols=129 Identities=19% Similarity=0.244 Sum_probs=83.1
Q ss_pred EEEEEecc---hhhhHHHHHHhcCCCCceecccccccceeeee---cCCCCCCC----CCceeeecCCceeEEeeeCCCC
Q 044130 266 IEAVVTGS---MAQYIPSLEYYSAGKLPLVGTMYASSECYFGV---NLKPLSNP----ADVSFTLLPNMCYFEFLPLGGE 335 (565)
Q Consensus 266 i~~~~~G~---~~~y~~~l~~~~g~~~~~~~~~y~aSEg~~gi---~~~~~~~~----~~~~~~l~p~~~ffEFip~~~~ 335 (565)
+..+..|| ....++.+++.+++ ++++ ..||+||+...+ +....... ...+. .+|+. ....++.+
T Consensus 236 l~~v~~~g~~~~~~~~~~~~~~~~~-~~i~-~~YG~tE~g~~~~~~~~~~~~~~~~~~~~~G~-~~~~~-~~~i~~~~-- 309 (408)
T TIGR01733 236 LRLVILGGEALTPALVDRWRARGPG-ARLI-NLYGPTETTVWSTATLVDADDAPRESPVPIGR-PLANT-RLYVLDDD-- 309 (408)
T ss_pred ceEEEEeCccCCHHHHHHHHHhCCC-cEEE-ecccCCceEEEEEEEEcCccccCCccccccCc-ccCCc-eEEEECCC--
Confidence 55555555 34566778888886 8888 899999985322 11111110 01111 12221 12222211
Q ss_pred CCccccccccccccCCCCceeeccCcccCCeEEEEeccc---ccee----------------------eeecCCEEEEee
Q 044130 336 NGTLLSMEFNEEEEVPNDKLVDLGHVRVGHYYELVVTTF---AGLN----------------------RYRIGDVLQVTG 390 (565)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~v~l~eve~G~~YelViTt~---~GLy----------------------RYriGDvV~v~g 390 (565)
...+..|+.+||+|+.. .|.| .|++||+.++..
T Consensus 310 ----------------------~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~TGDl~~~d~ 367 (408)
T TIGR01733 310 ----------------------LRPVPVGVVGELYIGGPGVARGYLNRPELTAERFVPDPFAGGDGARLYRTGDLVRYLP 367 (408)
T ss_pred ----------------------CCCCCCCCceEEEecCccccccccCChhhhhcceeeCCCCCCCCceEEECCceEEEcC
Confidence 12255888999999874 2232 699999998874
Q ss_pred eeCCCCEEEEEeecCceeeeeecccCHHHHHHHHHH
Q 044130 391 FYNRAPQFRFICRRNVVLSIDNDKTNEEDLHKSVTI 426 (565)
Q Consensus 391 f~~~~P~i~F~gR~~~~l~i~GEkl~e~~v~~av~~ 426 (565)
+ -.+.|+||.++++++.|++++..+|++++..
T Consensus 368 --~--g~~~~~gR~~~~i~~~G~~v~~~~ie~~l~~ 399 (408)
T TIGR01733 368 --D--GNLEFLGRIDDQVKIRGYRIELGEIEAALLR 399 (408)
T ss_pred --C--CCEEEeeccCCEEEeCeEEechHHHHHHHhc
Confidence 2 3599999999999999999999999999964
No 33
>PRK07529 AMP-binding domain protein; Validated
Probab=97.98 E-value=0.00031 Score=80.22 Aligned_cols=133 Identities=14% Similarity=0.191 Sum_probs=87.1
Q ss_pred EEEEEecch---hhhHHHHHHhcCCCCceecccccccceeeeecCCCCC---CCCCceeeecCCceeEEeeeCCCCCCcc
Q 044130 266 IEAVVTGSM---AQYIPSLEYYSAGKLPLVGTMYASSECYFGVNLKPLS---NPADVSFTLLPNMCYFEFLPLGGENGTL 339 (565)
Q Consensus 266 i~~~~~G~~---~~y~~~l~~~~g~~~~~~~~~y~aSEg~~gi~~~~~~---~~~~~~~~l~p~~~ffEFip~~~~~~~~ 339 (565)
+.++++||. ....+++++.+| ++++ .+||+||+.......+.. .++..+.. +|+. -+.++..++.
T Consensus 335 lr~v~~gg~~l~~~l~~~~~~~~g--~~l~-~~YG~TE~~~~~~~~~~~~~~~~~svG~~-~p~~-~v~i~~~d~~---- 405 (632)
T PRK07529 335 LRYALCGAAPLPVEVFRRFEAATG--VRIV-EGYGLTEATCVSSVNPPDGERRIGSVGLR-LPYQ-RVRVVILDDA---- 405 (632)
T ss_pred eEEEEEcCCCCCHHHHHHHHHHhC--CcEe-eeecccccCcccccCCccccccCCCcccc-cCCc-eEEEEEcCCC----
Confidence 666777762 345567777775 8888 999999985433222211 11122332 2322 2445444421
Q ss_pred ccccccccccCCCCceeeccCcccCCeEEEEeccc---ccee-------------eeecCCEEEEeeeeCCCCEEEEEee
Q 044130 340 LSMEFNEEEEVPNDKLVDLGHVRVGHYYELVVTTF---AGLN-------------RYRIGDVLQVTGFYNRAPQFRFICR 403 (565)
Q Consensus 340 ~~~~~~~~~~~~~~~~v~l~eve~G~~YelViTt~---~GLy-------------RYriGDvV~v~gf~~~~P~i~F~gR 403 (565)
.. ...++..|+.+||+|++. .|.+ -|++||+.++.. .-.+.|+||
T Consensus 406 -------------g~--~~~~~~~g~~Gel~v~gp~v~~GY~~~~~~~~~~~~~gw~~TGDlg~~d~----dG~l~i~GR 466 (632)
T PRK07529 406 -------------GR--YLRDCAVDEVGVLCIAGPNVFSGYLEAAHNKGLWLEDGWLNTGDLGRIDA----DGYFWLTGR 466 (632)
T ss_pred -------------Cc--ccccCCCCCceEEEEECCCccccccCCccccccccCCCceEcCcEEEEcC----CceEEEEec
Confidence 10 112356899999999764 2311 389999999863 347899999
Q ss_pred cCceeeeeecccCHHHHHHHHHH
Q 044130 404 RNVVLSIDNDKTNEEDLHKSVTI 426 (565)
Q Consensus 404 ~~~~l~i~GEkl~e~~v~~av~~ 426 (565)
.++++.+.|+++++.+|++++.+
T Consensus 467 ~~d~i~~~G~~i~p~eIE~~l~~ 489 (632)
T PRK07529 467 AKDLIIRGGHNIDPAAIEEALLR 489 (632)
T ss_pred ccCEEEeCCEEECHHHHHHHHHh
Confidence 99999999999999999999975
No 34
>PRK07768 long-chain-fatty-acid--CoA ligase; Validated
Probab=97.96 E-value=0.00042 Score=77.06 Aligned_cols=63 Identities=11% Similarity=0.055 Sum_probs=51.6
Q ss_pred cccCCeEEEEeccc---ccee-------------eeecCCEEEEeeeeCCCCEEEEEeecCceeeeeecccCHHHHHHHH
Q 044130 361 VRVGHYYELVVTTF---AGLN-------------RYRIGDVLQVTGFYNRAPQFRFICRRNVVLSIDNDKTNEEDLHKSV 424 (565)
Q Consensus 361 ve~G~~YelViTt~---~GLy-------------RYriGDvV~v~gf~~~~P~i~F~gR~~~~l~i~GEkl~e~~v~~av 424 (565)
+..|+..||+++.. .|.| .|++||++++.. .-.+.|+||.++++++.|++++..+|+.+|
T Consensus 381 ~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGDl~~~~~----~g~l~~~GR~~d~i~~~G~~v~~~eiE~~l 456 (545)
T PRK07768 381 LPPRGVGVIELRGESVTPGYLTMDGFIPAQDADGWLDTGDLGYLTE----EGEVVVCGRVKDVIIMAGRNIYPTDIERAA 456 (545)
T ss_pred CCCCCEEEEEEccCcccccccCCCCCcccccCCCeeeccceEEEec----CCEEEEEccccceEEECCEecCHHHHHHHH
Confidence 45788999999764 2332 499999999863 226899999999999999999999999999
Q ss_pred HHH
Q 044130 425 TIA 427 (565)
Q Consensus 425 ~~~ 427 (565)
...
T Consensus 457 ~~~ 459 (545)
T PRK07768 457 ARV 459 (545)
T ss_pred HhC
Confidence 764
No 35
>PRK06187 long-chain-fatty-acid--CoA ligase; Validated
Probab=97.95 E-value=0.00065 Score=74.38 Aligned_cols=132 Identities=17% Similarity=0.178 Sum_probs=83.8
Q ss_pred cCCCCceEEEEEecc---hhhhHHHHHHhcCCCCceeccccccccee-eeecCCCC-C------CCCCceeeecCCceeE
Q 044130 259 LWPRAKYIEAVVTGS---MAQYIPSLEYYSAGKLPLVGTMYASSECY-FGVNLKPL-S------NPADVSFTLLPNMCYF 327 (565)
Q Consensus 259 lWP~l~~i~~~~~G~---~~~y~~~l~~~~g~~~~~~~~~y~aSEg~-~gi~~~~~-~------~~~~~~~~l~p~~~ff 327 (565)
-+++++ .+..|| ....++.+++.++ ++++ ..||+||+. ++...... . .....+. .+|+ ..+
T Consensus 279 ~~~~l~---~v~~~Ge~l~~~~~~~~~~~~~--~~v~-~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~G~-~~~~-~~~ 350 (521)
T PRK06187 279 DFSSLR---LVIYGGAALPPALLREFKEKFG--IDLV-QGYGMTETSPVVSVLPPEDQLPGQWTKRRSAGR-PLPG-VEA 350 (521)
T ss_pred Ccchhh---EEEEcCcCCCHHHHHHHHHHhC--cchh-eeeccCccCcccccCCcccccccccccCCcccc-ccCC-eEE
Confidence 456644 445554 2355677777663 8888 899999973 22111110 0 0111122 1232 234
Q ss_pred EeeeCCCCCCccccccccccccCCCCceeeccCccc--CCeEEEEeccc---cce-ee------------eecCCEEEEe
Q 044130 328 EFLPLGGENGTLLSMEFNEEEEVPNDKLVDLGHVRV--GHYYELVVTTF---AGL-NR------------YRIGDVLQVT 389 (565)
Q Consensus 328 EFip~~~~~~~~~~~~~~~~~~~~~~~~v~l~eve~--G~~YelViTt~---~GL-yR------------YriGDvV~v~ 389 (565)
+.++++. .. +.. |+.+||++++. .|. -+ |++||++++.
T Consensus 351 ~i~~~~~-------------------~~-----~~~~~g~~Gel~v~~~~~~~~y~~~~~~~~~~~~~~~~~tGD~~~~~ 406 (521)
T PRK06187 351 RIVDDDG-------------------DE-----LPPDGGEVGEIIVRGPWLMQGYWNRPEATAETIDGGWLHTGDVGYID 406 (521)
T ss_pred EEECCCC-------------------CC-----CCCCCCCeeEEEEECcchhhhhcCCHHHHHHHhhCCceeccceEEEc
Confidence 4454321 11 334 99999999886 343 34 9999999986
Q ss_pred eeeCCCCEEEEEeecCceeeeeecccCHHHHHHHHHH
Q 044130 390 GFYNRAPQFRFICRRNVVLSIDNDKTNEEDLHKSVTI 426 (565)
Q Consensus 390 gf~~~~P~i~F~gR~~~~l~i~GEkl~e~~v~~av~~ 426 (565)
. + ..+.+.||.++++.+.|++++..+|+.++..
T Consensus 407 ~--~--g~~~~~GR~~~~i~~~G~~v~~~~IE~~l~~ 439 (521)
T PRK06187 407 E--D--GYLYITDRIKDVIISGGENIYPRELEDALYG 439 (521)
T ss_pred C--C--CCEEEeecccceEEcCCeEECHHHHHHHHHh
Confidence 4 2 3688999999999999999999999998865
No 36
>PRK06145 acyl-CoA synthetase; Validated
Probab=97.95 E-value=5.7e-05 Score=82.72 Aligned_cols=130 Identities=11% Similarity=0.097 Sum_probs=85.7
Q ss_pred EEEEEecch---hhhHHHHHHhcCCCCceecccccccceeeeecCCC---C-CCCCCceeeecCCceeEEeeeCCCCCCc
Q 044130 266 IEAVVTGSM---AQYIPSLEYYSAGKLPLVGTMYASSECYFGVNLKP---L-SNPADVSFTLLPNMCYFEFLPLGGENGT 338 (565)
Q Consensus 266 i~~~~~G~~---~~y~~~l~~~~g~~~~~~~~~y~aSEg~~gi~~~~---~-~~~~~~~~~l~p~~~ffEFip~~~~~~~ 338 (565)
+.++++||. ...+..+++.+++ ++++ ..||+||+........ . ..+...+.. +|+. -.+.++.+
T Consensus 266 l~~~~~gG~~~~~~~~~~~~~~~~~-~~v~-~~YG~tE~~~~~~~~~~~~~~~~~~~~G~~-~~~~-~~~i~~~~----- 336 (497)
T PRK06145 266 LAWCIGGGEKTPESRIRDFTRVFTR-ARYI-DAYGLTETCSGDTLMEAGREIEKIGSTGRA-LAHV-EIRIADGA----- 336 (497)
T ss_pred ceEEEecCCCCCHHHHHHHHHHcCC-CceE-EeecCcccCCcceeccCccccccCCCcccC-CCCc-eEEEECCC-----
Confidence 556666762 3456777777876 8888 8999999854221110 0 011122322 2322 23333311
Q ss_pred cccccccccccCCCCceeeccCcccCCeEEEEeccc---ccee-------------eeecCCEEEEeeeeCCCCEEEEEe
Q 044130 339 LLSMEFNEEEEVPNDKLVDLGHVRVGHYYELVVTTF---AGLN-------------RYRIGDVLQVTGFYNRAPQFRFIC 402 (565)
Q Consensus 339 ~~~~~~~~~~~~~~~~~v~l~eve~G~~YelViTt~---~GLy-------------RYriGDvV~v~gf~~~~P~i~F~g 402 (565)
.. .+..|+..||++++. .|.| .|++||+++... .-.+.|+|
T Consensus 337 --------------~~-----~~~~~~~Gel~v~g~~~~~Gy~~~~~~~~~~~~~~~~~TGDl~~~~~----~g~l~~~G 393 (497)
T PRK06145 337 --------------GR-----WLPPNMKGEICMRGPKVTKGYWKDPEKTAEAFYGDWFRSGDVGYLDE----EGFLYLTD 393 (497)
T ss_pred --------------CC-----CCCCCCceEEEEECcchhhhhcCChHHHHHHHhCCCeeccceEEEcC----CCcEEEec
Confidence 11 244788899999874 4555 399999998863 23689999
Q ss_pred ecCceeeeeecccCHHHHHHHHHHH
Q 044130 403 RRNVVLSIDNDKTNEEDLHKSVTIA 427 (565)
Q Consensus 403 R~~~~l~i~GEkl~e~~v~~av~~~ 427 (565)
|.++++.+.|+++...+|+.++...
T Consensus 394 R~~~~i~~~G~~v~~~~IE~~l~~~ 418 (497)
T PRK06145 394 RKKDMIISGGENIASSEVERVIYEL 418 (497)
T ss_pred cccceEEeCCeEECHHHHHHHHHhC
Confidence 9999999999999999999999763
No 37
>PRK06155 crotonobetaine/carnitine-CoA ligase; Provisional
Probab=97.95 E-value=7.7e-05 Score=83.27 Aligned_cols=128 Identities=16% Similarity=0.210 Sum_probs=83.2
Q ss_pred EEEEEecch-hhhHHHHHHhcCCCCceecccccccceeeeecCC-CCCCCCCceeeecCCceeEEeeeCCCCCCcccccc
Q 044130 266 IEAVVTGSM-AQYIPSLEYYSAGKLPLVGTMYASSECYFGVNLK-PLSNPADVSFTLLPNMCYFEFLPLGGENGTLLSME 343 (565)
Q Consensus 266 i~~~~~G~~-~~y~~~l~~~~g~~~~~~~~~y~aSEg~~gi~~~-~~~~~~~~~~~l~p~~~ffEFip~~~~~~~~~~~~ 343 (565)
+..+.+|+. ...++++++.++ ++++ ..||+||+...+-.. +...++..+. ..++ .-.++++.+
T Consensus 296 l~~~~~g~~~~~~~~~~~~~~~--~~v~-~~YG~tE~~~~~~~~~~~~~~~~vG~-~~~~-~~~~i~d~~---------- 360 (542)
T PRK06155 296 VRVALGPGVPAALHAAFRERFG--VDLL-DGYGSTETNFVIAVTHGSQRPGSMGR-LAPG-FEARVVDEH---------- 360 (542)
T ss_pred eEEEEEcCCCHHHHHHHHHHcC--CCEE-eeecccccCccccCCCCCCCCCCcCc-cCCC-ceEEEECCC----------
Confidence 344455653 334566666666 7888 999999984322111 1111222222 2222 234555322
Q ss_pred ccccccCCCCceeeccCcccCCeEEEEeccc------cce-------------eeeecCCEEEEeeeeCCCCEEEEEeec
Q 044130 344 FNEEEEVPNDKLVDLGHVRVGHYYELVVTTF------AGL-------------NRYRIGDVLQVTGFYNRAPQFRFICRR 404 (565)
Q Consensus 344 ~~~~~~~~~~~~v~l~eve~G~~YelViTt~------~GL-------------yRYriGDvV~v~gf~~~~P~i~F~gR~ 404 (565)
.+ ++..|+.+||+|+.. .|. -+|++||++++.. .-.+.|+||.
T Consensus 361 ---------~~-----~~~~g~~Gei~v~~~~~~~~~~GY~~~~~~~~~~~~~~~~~TGD~~~~~~----dG~l~i~GR~ 422 (542)
T PRK06155 361 ---------DQ-----ELPDGEPGELLLRADEPFAFATGYFGMPEKTVEAWRNLWFHTGDRVVRDA----DGWFRFVDRI 422 (542)
T ss_pred ---------CC-----CCCCCCceEEEEecCCccccchhhcCCHHHHHHhhcCCcEeccceEEEcC----CceEEEEecC
Confidence 11 245788999999874 232 3799999999863 2368999999
Q ss_pred CceeeeeecccCHHHHHHHHHH
Q 044130 405 NVVLSIDNDKTNEEDLHKSVTI 426 (565)
Q Consensus 405 ~~~l~i~GEkl~e~~v~~av~~ 426 (565)
++++.+.|++++..+|+.+|.+
T Consensus 423 ~d~i~~~G~~v~p~eIE~~l~~ 444 (542)
T PRK06155 423 KDAIRRRGENISSFEVEQVLLS 444 (542)
T ss_pred CCEEEeCCEEECHHHHHHHHHh
Confidence 9999999999999999999966
No 38
>PRK04813 D-alanine--poly(phosphoribitol) ligase subunit 1; Provisional
Probab=97.94 E-value=7.5e-05 Score=81.59 Aligned_cols=61 Identities=15% Similarity=0.254 Sum_probs=49.7
Q ss_pred cccCCeEEEEeccc--------------------cceeeeecCCEEEEeeeeCCCCEEEEEeecCceeeeeecccCHHHH
Q 044130 361 VRVGHYYELVVTTF--------------------AGLNRYRIGDVLQVTGFYNRAPQFRFICRRNVVLSIDNDKTNEEDL 420 (565)
Q Consensus 361 ve~G~~YelViTt~--------------------~GLyRYriGDvV~v~gf~~~~P~i~F~gR~~~~l~i~GEkl~e~~v 420 (565)
+..|+.+||+++.. .|.=-|++||++++ . ++ .+.|.||.++++++.|+|++..+|
T Consensus 339 ~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~g~~~~~tGD~~~~-~--~g--~~~~~GR~~d~i~~~G~~v~~~~i 413 (503)
T PRK04813 339 LPDGEQGEIVISGPSVSKGYLNNPEKTAEAFFTFDGQPAYHTGDAGYL-E--DG--LLFYQGRIDFQIKLNGYRIELEEI 413 (503)
T ss_pred CCCCCceEEEEeccccccccCCChhHhHHhhccCCCceeEECCceEEe-e--CC--eEEEeccccceEEECcEEeCHHHH
Confidence 44688899999863 23113999999998 2 33 789999999999999999999999
Q ss_pred HHHHHH
Q 044130 421 HKSVTI 426 (565)
Q Consensus 421 ~~av~~ 426 (565)
++++..
T Consensus 414 E~~l~~ 419 (503)
T PRK04813 414 EQNLRQ 419 (503)
T ss_pred HHHHHh
Confidence 999876
No 39
>PLN02654 acetate-CoA ligase
Probab=97.94 E-value=0.0021 Score=73.91 Aligned_cols=159 Identities=10% Similarity=0.106 Sum_probs=90.1
Q ss_pred cccCCeEEEEeccc-----ccee----------------eeecCCEEEEeeeeCCCCEEEEEeecCceeeeeecccCHHH
Q 044130 361 VRVGHYYELVVTTF-----AGLN----------------RYRIGDVLQVTGFYNRAPQFRFICRRNVVLSIDNDKTNEED 419 (565)
Q Consensus 361 ve~G~~YelViTt~-----~GLy----------------RYriGDvV~v~gf~~~~P~i~F~gR~~~~l~i~GEkl~e~~ 419 (565)
+..|+.+||+|+.. .|+| -|++||+.++.. --.+.|+||.++++++.|++++..+
T Consensus 475 ~~~~~~Gel~v~~~~p~~~~gy~~~~~~~~~~~~~~~~g~~~TGD~~~~d~----dG~l~i~GR~dd~I~~~G~ri~p~E 550 (666)
T PLN02654 475 IEGECSGYLCVKKSWPGAFRTLYGDHERYETTYFKPFAGYYFSGDGCSRDK----DGYYWLTGRVDDVINVSGHRIGTAE 550 (666)
T ss_pred CCCCCceEEEEcCCCchhhhhhcCChHHHHHhhhhcCCCEEEeCceEEECC----CCcEEEeeeccCeEEeCCEEECHHH
Confidence 44677799998751 2332 289999998863 2368999999999999999999999
Q ss_pred HHHHHHHHHhhcccCCCeEEeEEEe-ecCCCCCceeEEEEEEEecCCCCCCCChHHHHHHHHHHHHHHhChHHHHhhccC
Q 044130 420 LHKSVTIAKNLLEPYSALLVEYTSY-ADTSTVPGHYVLYWEIQIVDSPALPLDHQKVLEECCIAVEEQLDYVYRRCRSHD 498 (565)
Q Consensus 420 v~~av~~~~~~l~~~g~~l~~f~~~-~d~~~~p~~Y~l~~e~e~~~~~~~~~~~~~~l~~~~~~ld~~Ln~~Y~~~R~~~ 498 (565)
|+.++.+.. + |.+-.|+ .+.......-+.|+.+.. +. ..+ .+..+++...+.+.|
T Consensus 551 IE~~l~~~p------~--V~eaaVvg~~d~~~ge~~~a~Vvl~~-~~---~~~-~~l~~~l~~~~~~~L----------- 606 (666)
T PLN02654 551 VESALVSHP------Q--CAEAAVVGIEHEVKGQGIYAFVTLVE-GV---PYS-EELRKSLILTVRNQI----------- 606 (666)
T ss_pred HHHHHHhCC------C--eeeEEEEeeEcCCCCeEEEEEEEECC-CC---CCC-HHHHHHHHHHHHHhC-----------
Confidence 999997531 2 3344443 222212223346666642 11 122 222223333333333
Q ss_pred Cc-cCCeEEEEeC------CCcHHHHHHHHHhcCCCCCCCCCCcccCCChHHHHHHhc
Q 044130 499 KS-VGPLEIRVVE------PGTFETLMDLLVSQGGSINQYKTPRCIKSNNAALMLLDS 549 (565)
Q Consensus 499 g~-l~p~~v~~v~------~gtf~~~~~~~~~~G~~~~Q~K~Pr~~~~~~~~~~~L~~ 549 (565)
+. ..|-.|.+|+ .|-..+-.=.....|. ..+.+.+.-+. |++.++.+..
T Consensus 607 ~~~~~P~~i~~v~~lP~T~sGKi~r~~l~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~ 662 (666)
T PLN02654 607 GAFAAPDKIHWAPGLPKTRSGKIMRRILRKIASRQ-LDELGDTSTLA-DPGVVDQLIA 662 (666)
T ss_pred CCCcCCCEEEECCCCCCCCCcCchHHHHHHHHcCC-CCCCCCccccc-CHHHHHHHHH
Confidence 22 2344566653 3433331111112332 22566777787 8888887654
No 40
>TIGR02316 propion_prpE propionate--CoA ligase. This family contains one of three readily separable clades of proteins in the group of acetate and propionate--CoA ligases. Characterized members of this family act on propionate. From propionyl-CoA, there is a cyclic degradation pathway: it is ligated by PrpC to the TCA cycle intermediate oxaloacetate, acted upon further by PrpD and an aconitase, then cleaved by PrpB to pyruvate and the TCA cycle intermediate succinate.
Probab=97.94 E-value=0.00094 Score=76.09 Aligned_cols=62 Identities=13% Similarity=0.043 Sum_probs=50.6
Q ss_pred cccCCeEEEEeccc------ccee-----------------eeecCCEEEEeeeeCCCCEEEEEeecCceeeeeecccCH
Q 044130 361 VRVGHYYELVVTTF------AGLN-----------------RYRIGDVLQVTGFYNRAPQFRFICRRNVVLSIDNDKTNE 417 (565)
Q Consensus 361 ve~G~~YelViTt~------~GLy-----------------RYriGDvV~v~gf~~~~P~i~F~gR~~~~l~i~GEkl~e 417 (565)
+..|+..||+|+.. .|+| .|++||++++.. + -.+.|+||.++++++.|+++..
T Consensus 432 ~~~g~~Gel~v~gp~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~g~~d~--d--G~l~i~GR~dd~ik~~G~rv~~ 507 (628)
T TIGR02316 432 CGPNEKGVLTVVPPLPPGCLSTVWGDDARFLKTYWSHFKRPLYSSFDWGIRDE--D--GYTFILGRTDDVINVAGHRLGT 507 (628)
T ss_pred CCCCCcEEEEEecCCCccccccccCChHHHHHhhhhcCCCCEEECCceEEEcC--C--CcEEEEEcCcceEEeCCEEeCH
Confidence 45788899999764 2222 399999998763 2 2589999999999999999999
Q ss_pred HHHHHHHHH
Q 044130 418 EDLHKSVTI 426 (565)
Q Consensus 418 ~~v~~av~~ 426 (565)
.+|+.+|.+
T Consensus 508 ~eIE~~l~~ 516 (628)
T TIGR02316 508 REIEESVSS 516 (628)
T ss_pred HHHHHHHHh
Confidence 999999965
No 41
>TIGR03208 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase. Members of this protein family are cyclohexanecarboxylate-CoA ligase. This enzyme prepares the aliphatic ring compound, cyclohexanecarboxylate, for dehydrogenation and then degradation by a pathway also used in benzoyl-CoA degradation in Rhodopseudomonas palustris.
Probab=97.93 E-value=5.9e-05 Score=83.84 Aligned_cols=62 Identities=15% Similarity=0.153 Sum_probs=51.9
Q ss_pred cccCCeEEEEeccc---ccee------------eeecCCEEEEeeeeCCCCEEEEEeecCceeeeeecccCHHHHHHHHH
Q 044130 361 VRVGHYYELVVTTF---AGLN------------RYRIGDVLQVTGFYNRAPQFRFICRRNVVLSIDNDKTNEEDLHKSVT 425 (565)
Q Consensus 361 ve~G~~YelViTt~---~GLy------------RYriGDvV~v~gf~~~~P~i~F~gR~~~~l~i~GEkl~e~~v~~av~ 425 (565)
+..|+.+||+|++. .|.| .|++||++++.. .-.+.|+||.++++++.|+|+.+.+|+.++.
T Consensus 385 ~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~TGD~~~~~~----~g~l~~~gR~~~~i~~~G~~v~p~eIE~~l~ 460 (538)
T TIGR03208 385 LSQGETGRLLVRGCSNFGGYLKRPHLNSTDAEGWFDTGDLAFQDA----EGYIRINGRSKDVIIRGGENIPVVEIENLLY 460 (538)
T ss_pred CcCCCCcEEEEecCcccccccCCcccccccCCCceeccceEEECC----CCcEEEEeccCceEEECCEEECHHHHHHHHh
Confidence 45788999999875 3444 399999998863 2368999999999999999999999999996
Q ss_pred H
Q 044130 426 I 426 (565)
Q Consensus 426 ~ 426 (565)
+
T Consensus 461 ~ 461 (538)
T TIGR03208 461 Q 461 (538)
T ss_pred c
Confidence 5
No 42
>PRK07638 acyl-CoA synthetase; Validated
Probab=97.92 E-value=9.6e-05 Score=80.92 Aligned_cols=129 Identities=15% Similarity=0.122 Sum_probs=85.2
Q ss_pred EEEEEecc--hhhhHHHHHHhcCCCCceecccccccceeeeecCCCCC---CCCCceeeecCCceeEEeeeCCCCCCccc
Q 044130 266 IEAVVTGS--MAQYIPSLEYYSAGKLPLVGTMYASSECYFGVNLKPLS---NPADVSFTLLPNMCYFEFLPLGGENGTLL 340 (565)
Q Consensus 266 i~~~~~G~--~~~y~~~l~~~~g~~~~~~~~~y~aSEg~~gi~~~~~~---~~~~~~~~l~p~~~ffEFip~~~~~~~~~ 340 (565)
+..+.+|+ ...-..++++.+++ ++++ ..||+||+.......+.. .+...+. .+|+ ..++.++.+
T Consensus 256 ~~~~~~G~~l~~~~~~~~~~~~~~-~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~G~-~~~~-~~~~i~d~~------- 324 (487)
T PRK07638 256 MKIISSGAKWEAEAKEKIKNIFPY-AKLY-EFYGASELSFVTALVDEESERRPNSVGR-PFHN-VQVRICNEA------- 324 (487)
T ss_pred eEEEEcCCCCCHHHHHHHHHHcCC-CeEE-EEecCCccCceEEecccccCCCCCCCCc-ccCC-cEEEEECCC-------
Confidence 44555565 23456777787877 8888 899999985322121110 1112232 1233 345555422
Q ss_pred cccccccccCCCCceeeccCcccCCeEEEEeccc---ccee-------------eeecCCEEEEeeeeCCCCEEEEEeec
Q 044130 341 SMEFNEEEEVPNDKLVDLGHVRVGHYYELVVTTF---AGLN-------------RYRIGDVLQVTGFYNRAPQFRFICRR 404 (565)
Q Consensus 341 ~~~~~~~~~~~~~~~v~l~eve~G~~YelViTt~---~GLy-------------RYriGDvV~v~gf~~~~P~i~F~gR~ 404 (565)
.. .+..|+..||+|++. .|.| .|++||++++.. .-.+.|+||.
T Consensus 325 ------------g~-----~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGDl~~~d~----~g~l~i~GR~ 383 (487)
T PRK07638 325 ------------GE-----EVQKGEIGTVYVKSPQFFMGYIIGGVLARELNADGWMTVRDVGYEDE----EGFIYIVGRE 383 (487)
T ss_pred ------------CC-----CCCCCCCeEEEEecccceeeecCCHHHHhhhccCCcEecCccEeEcC----CCeEEEEecC
Confidence 11 256889999999874 2322 478999987753 3478899999
Q ss_pred CceeeeeecccCHHHHHHHHHH
Q 044130 405 NVVLSIDNDKTNEEDLHKSVTI 426 (565)
Q Consensus 405 ~~~l~i~GEkl~e~~v~~av~~ 426 (565)
++++.+.|++++..+|++++.+
T Consensus 384 ~d~i~~~G~~v~~~eiE~~l~~ 405 (487)
T PRK07638 384 KNMILFGGINIFPEEIESVLHE 405 (487)
T ss_pred CCeEEeCCEEECHHHHHHHHHh
Confidence 9999999999999999999975
No 43
>PRK07059 Long-chain-fatty-acid--CoA ligase; Validated
Probab=97.92 E-value=5.5e-05 Score=84.41 Aligned_cols=128 Identities=14% Similarity=0.153 Sum_probs=82.7
Q ss_pred EEEEEecch---hhhHHHHHHhcCCCCceecccccccceeeeecCCCCC---CCCCceeeecCCceeEEeeeCCCCCCcc
Q 044130 266 IEAVVTGSM---AQYIPSLEYYSAGKLPLVGTMYASSECYFGVNLKPLS---NPADVSFTLLPNMCYFEFLPLGGENGTL 339 (565)
Q Consensus 266 i~~~~~G~~---~~y~~~l~~~~g~~~~~~~~~y~aSEg~~gi~~~~~~---~~~~~~~~l~p~~~ffEFip~~~~~~~~ 339 (565)
+.++..||. ....+++++.+| ++++ ..||+||+...+...+.. .+...+.. ++ ..-.+.++.+
T Consensus 329 l~~~~~gg~~~~~~~~~~~~~~~~--~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~vG~p-~~-g~~v~i~d~~------ 397 (557)
T PRK07059 329 LIVANGGGMAVQRPVAERWLEMTG--CPIT-EGYGLSETSPVATCNPVDATEFSGTIGLP-LP-STEVSIRDDD------ 397 (557)
T ss_pred heEEEeccccCCHHHHHHHHHHhC--CCee-eccccccccchhhcCCCCCCCcCCcccCc-cC-CcEEEEECCC------
Confidence 566677763 344566666665 7888 899999985432221111 11122321 22 2234444322
Q ss_pred ccccccccccCCCCceeeccCcccCCeEEEEecccc---cee--------------eeecCCEEEEeeeeCCCCEEEEEe
Q 044130 340 LSMEFNEEEEVPNDKLVDLGHVRVGHYYELVVTTFA---GLN--------------RYRIGDVLQVTGFYNRAPQFRFIC 402 (565)
Q Consensus 340 ~~~~~~~~~~~~~~~~v~l~eve~G~~YelViTt~~---GLy--------------RYriGDvV~v~gf~~~~P~i~F~g 402 (565)
.++ +..|+.+||++++.. |.| -|++||+++... .-.+.|+|
T Consensus 398 -------------~~~-----~~~g~~Gel~v~g~~~~~gY~~~~~~~~~~~~~~g~~~TGDl~~~~~----~g~~~~~G 455 (557)
T PRK07059 398 -------------GND-----LPLGEPGEICIRGPQVMAGYWNRPDETAKVMTADGFFRTGDVGVMDE----RGYTKIVD 455 (557)
T ss_pred -------------CCC-----CCCCCceEEEEeCCccchhhhcCHHHHhhhcccCCceecCcEEEEcC----CCcEEEec
Confidence 122 457888999998632 211 288999988753 23689999
Q ss_pred ecCceeeeeecccCHHHHHHHHHH
Q 044130 403 RRNVVLSIDNDKTNEEDLHKSVTI 426 (565)
Q Consensus 403 R~~~~l~i~GEkl~e~~v~~av~~ 426 (565)
|.++++.+.|++++..+|++++..
T Consensus 456 R~~~~i~~~G~~i~p~~iE~~l~~ 479 (557)
T PRK07059 456 RKKDMILVSGFNVYPNEIEEVVAS 479 (557)
T ss_pred ccccceEECCEEEcHHHHHHHHHh
Confidence 999999999999999999999965
No 44
>PRK06164 acyl-CoA synthetase; Validated
Probab=97.91 E-value=0.00044 Score=76.72 Aligned_cols=62 Identities=19% Similarity=0.256 Sum_probs=51.0
Q ss_pred cccCCeEEEEeccc---ccee--------------eeecCCEEEEeeeeCCCCEEEEEeecCceeeeeecccCHHHHHHH
Q 044130 361 VRVGHYYELVVTTF---AGLN--------------RYRIGDVLQVTGFYNRAPQFRFICRRNVVLSIDNDKTNEEDLHKS 423 (565)
Q Consensus 361 ve~G~~YelViTt~---~GLy--------------RYriGDvV~v~gf~~~~P~i~F~gR~~~~l~i~GEkl~e~~v~~a 423 (565)
+..|+..||+|++. .|.| -|++||++++.. .-.+.|+||.++++++.|++++..+|+.+
T Consensus 372 ~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~~~~~~~~~TGDl~~~~~----~g~l~~~GR~~~~i~~~G~~i~p~eIE~~ 447 (540)
T PRK06164 372 LPDGESGEIEIRAPSLMRGYLDNPDATARALTDDGYFRTGDLGYTRG----DGQFVYQTRMGDSLRLGGFLVNPAEIEHA 447 (540)
T ss_pred CCCCCeeEEEEecccccccccCCchhhhhcccCCCceecCCeEEEcC----CceEEEEeecCCeEEECCEEcCHHHHHHH
Confidence 45899999999883 2211 389999988764 23788999999999999999999999999
Q ss_pred HHH
Q 044130 424 VTI 426 (565)
Q Consensus 424 v~~ 426 (565)
+..
T Consensus 448 l~~ 450 (540)
T PRK06164 448 LEA 450 (540)
T ss_pred HHh
Confidence 965
No 45
>PRK12406 long-chain-fatty-acid--CoA ligase; Provisional
Probab=97.90 E-value=0.00071 Score=74.51 Aligned_cols=128 Identities=13% Similarity=0.114 Sum_probs=84.0
Q ss_pred EEEEEecc---hhhhHHHHHHhcCCCCceecccccccceee-eecC--CCCCCCCCceeeecCCceeEEeeeCCCCCCcc
Q 044130 266 IEAVVTGS---MAQYIPSLEYYSAGKLPLVGTMYASSECYF-GVNL--KPLSNPADVSFTLLPNMCYFEFLPLGGENGTL 339 (565)
Q Consensus 266 i~~~~~G~---~~~y~~~l~~~~g~~~~~~~~~y~aSEg~~-gi~~--~~~~~~~~~~~~l~p~~~ffEFip~~~~~~~~ 339 (565)
+.++++|| ....++++++.++ ++++ ..||+||+.. +... +....++..+. ..|+. -++.++.+
T Consensus 273 l~~v~~gg~~~~~~~~~~~~~~~~--~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~G~-~~~~~-~~~i~d~~------ 341 (509)
T PRK12406 273 LRHVIHAAAPCPADVKRAMIEWWG--PVIY-EYYGSTESGAVTFATSEDALSHPGTVGK-AAPGA-ELRFVDED------ 341 (509)
T ss_pred eeEEEEcCCCCCHHHHHHHHHHcC--CcEE-eeccccccCceEecCcccccccCCCcCc-cCCCc-EEEEECCC------
Confidence 66677776 2456677778776 6677 8999999843 2111 00111222333 23333 24444422
Q ss_pred ccccccccccCCCCceeeccCcccCCeEEEEecccc----cee-------------eeecCCEEEEeeeeCCCCEEEEEe
Q 044130 340 LSMEFNEEEEVPNDKLVDLGHVRVGHYYELVVTTFA----GLN-------------RYRIGDVLQVTGFYNRAPQFRFIC 402 (565)
Q Consensus 340 ~~~~~~~~~~~~~~~~v~l~eve~G~~YelViTt~~----GLy-------------RYriGDvV~v~gf~~~~P~i~F~g 402 (565)
. ..+..|+..||+++..+ |+| -|++||+++... .-.+.|+|
T Consensus 342 -------------~-----~~~~~g~~Gel~v~~~~~~~~~y~~~~~~~~~~~~~~~~~TGD~~~~~~----~g~~~~~G 399 (509)
T PRK12406 342 -------------G-----RPLPQGEIGEIYSRIAGNPDFTYHNKPEKRAEIDRGGFITSGDVGYLDA----DGYLFLCD 399 (509)
T ss_pred -------------C-----CCCCCCCceEEEEECCccccccccCCchhcccccCCCCeEEccEEEEcC----CceEEEee
Confidence 1 12558889999997642 333 278999988864 23678999
Q ss_pred ecCceeeeeecccCHHHHHHHHHH
Q 044130 403 RRNVVLSIDNDKTNEEDLHKSVTI 426 (565)
Q Consensus 403 R~~~~l~i~GEkl~e~~v~~av~~ 426 (565)
|.++++.+.|++++..+|+.+|..
T Consensus 400 R~~d~ik~~G~~v~~~~IE~~l~~ 423 (509)
T PRK12406 400 RKRDMVISGGVNIYPAEIEAVLHA 423 (509)
T ss_pred cccceEEECCEEECHHHHHHHHHh
Confidence 999999999999999999999975
No 46
>PRK06839 acyl-CoA synthetase; Validated
Probab=97.89 E-value=0.00033 Score=76.54 Aligned_cols=127 Identities=10% Similarity=0.090 Sum_probs=81.0
Q ss_pred EEEEEecch---hhhHHHHHHhcCCCCceecccccccceee-eecCCCC---CCCCCceeeecCCceeEEeeeCCCCCCc
Q 044130 266 IEAVVTGSM---AQYIPSLEYYSAGKLPLVGTMYASSECYF-GVNLKPL---SNPADVSFTLLPNMCYFEFLPLGGENGT 338 (565)
Q Consensus 266 i~~~~~G~~---~~y~~~l~~~~g~~~~~~~~~y~aSEg~~-gi~~~~~---~~~~~~~~~l~p~~~ffEFip~~~~~~~ 338 (565)
+..++.||. ....+.++.. | +++. ..||+||+.. ....... ..+...+.. +|+. -++.++.+.
T Consensus 266 lr~~~~gG~~~~~~~~~~~~~~-g--~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~~G~p-~~~~-~~~i~d~~~---- 335 (496)
T PRK06839 266 VRWFYNGGAPCPEELMREFIDR-G--FLFG-QGFGMTETSPTVFMLSEEDARRKVGSIGKP-VLFC-DYELIDENK---- 335 (496)
T ss_pred cceEEECCCCCCHHHHHHHHHh-C--CeeE-eeccCCCCCcceEecccccccccCCCCccc-CCCc-eEEEECCCc----
Confidence 666666763 3455666664 3 7887 8999999842 2111111 001111211 2221 233343221
Q ss_pred cccccccccccCCCCceeeccCcccCCeEEEEecccc---cee-------------eeecCCEEEEeeeeCCCCEEEEEe
Q 044130 339 LLSMEFNEEEEVPNDKLVDLGHVRVGHYYELVVTTFA---GLN-------------RYRIGDVLQVTGFYNRAPQFRFIC 402 (565)
Q Consensus 339 ~~~~~~~~~~~~~~~~~v~l~eve~G~~YelViTt~~---GLy-------------RYriGDvV~v~gf~~~~P~i~F~g 402 (565)
. ++..|+.+||+|++.. |.| .|++||+++... .-.+.|+|
T Consensus 336 ---------------~-----~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGDl~~~~~----~g~~~~~G 391 (496)
T PRK06839 336 ---------------N-----KVEVGEVGELLIRGPNVMKEYWNRPDATEETIQDGWLCTGDLARVDE----DGFVYIVG 391 (496)
T ss_pred ---------------C-----CCCCCCceEEEEECCCcchhhcCChHHHHHHHcCCCeeecceEEEcC----CCcEEEec
Confidence 1 1568999999998753 222 189999999863 23678999
Q ss_pred ecCceeeeeecccCHHHHHHHHHH
Q 044130 403 RRNVVLSIDNDKTNEEDLHKSVTI 426 (565)
Q Consensus 403 R~~~~l~i~GEkl~e~~v~~av~~ 426 (565)
|.+++++..|+++.+.+|+.++..
T Consensus 392 R~~d~i~~~G~~v~p~~iE~~l~~ 415 (496)
T PRK06839 392 RKKEMIISGGENIYPLEVEQVINK 415 (496)
T ss_pred cccceEEECCEEECHHHHHHHHHh
Confidence 999999999999999999999965
No 47
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=97.89 E-value=0.0002 Score=86.72 Aligned_cols=133 Identities=16% Similarity=0.175 Sum_probs=86.1
Q ss_pred CCCCceEEEEEecch---hhhHHHHHHhcCCCCceeccccccccee--eeecCCCC----------CCCCCceeeecCCc
Q 044130 260 WPRAKYIEAVVTGSM---AQYIPSLEYYSAGKLPLVGTMYASSECY--FGVNLKPL----------SNPADVSFTLLPNM 324 (565)
Q Consensus 260 WP~l~~i~~~~~G~~---~~y~~~l~~~~g~~~~~~~~~y~aSEg~--~gi~~~~~----------~~~~~~~~~l~p~~ 324 (565)
.|+ +.++.+||. ...++++++.+| ++++ ..||+||+. +..+.... +.+...+. .+|+.
T Consensus 897 ~~~---lr~~~~gg~~~~~~~~~~~~~~~g--~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~-p~~~~ 969 (1146)
T PRK08633 897 FAS---LRLVVAGAEKLKPEVADAFEEKFG--IRIL-EGYGATETSPVASVNLPDVLAADFKRQTGSKEGSVGM-PLPGV 969 (1146)
T ss_pred CCC---eeeEEEcCCcCCHHHHHHHHHHhC--CCee-cccccccCcceEEEecCcccccccccccCCCCCCccc-cCCCC
Confidence 466 667777772 345667777675 7888 999999973 22221110 01111221 12222
Q ss_pred eeEEeeeCCCCCCccccccccccccCCCCceeeccCcccCCeEEEEeccc---ccee-----------------eeecCC
Q 044130 325 CYFEFLPLGGENGTLLSMEFNEEEEVPNDKLVDLGHVRVGHYYELVVTTF---AGLN-----------------RYRIGD 384 (565)
Q Consensus 325 ~ffEFip~~~~~~~~~~~~~~~~~~~~~~~~v~l~eve~G~~YelViTt~---~GLy-----------------RYriGD 384 (565)
-.+.+++++ . .++.+|+..||+|+.. .|.| .|++||
T Consensus 970 -~v~i~d~~~------------------~-----~~~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~~~~~~~~~~~~TGD 1025 (1146)
T PRK08633 970 -AVRIVDPET------------------F-----EELPPGEDGLILIGGPQVMKGYLGDPEKTAEVIKDIDGIGWYVTGD 1025 (1146)
T ss_pred -EEEEEcCCC------------------C-----ccCCCCCceEEEEcCCCccccccCCccchHHHhhcCCCCCeEECCC
Confidence 233333221 1 2356899999999764 2322 489999
Q ss_pred EEEEeeeeCCCCEEEEEeecCceeeeeecccCHHHHHHHHHHH
Q 044130 385 VLQVTGFYNRAPQFRFICRRNVVLSIDNDKTNEEDLHKSVTIA 427 (565)
Q Consensus 385 vV~v~gf~~~~P~i~F~gR~~~~l~i~GEkl~e~~v~~av~~~ 427 (565)
++++.. -..+.|+||.++++++.|++++..+|++++.+.
T Consensus 1026 ~~~~~~----~g~l~~~gR~~d~i~~~G~~v~~~eiE~~l~~~ 1064 (1146)
T PRK08633 1026 KGHLDE----DGFLTITDRYSRFAKIGGEMVPLGAVEEELAKA 1064 (1146)
T ss_pred EEEEcC----CceEEEEecccchhhhCcEEECHHHHHHHHHhc
Confidence 999874 246899999999999999999999999999764
No 48
>PRK08314 long-chain-fatty-acid--CoA ligase; Validated
Probab=97.89 E-value=0.00016 Score=80.31 Aligned_cols=133 Identities=14% Similarity=0.089 Sum_probs=83.5
Q ss_pred CCCCceEEEEEecch---hhhHHHHHHhcCCCCceecccccccceeeeecCCCC-C-CCCCceeeecCCceeEEeeeCCC
Q 044130 260 WPRAKYIEAVVTGSM---AQYIPSLEYYSAGKLPLVGTMYASSECYFGVNLKPL-S-NPADVSFTLLPNMCYFEFLPLGG 334 (565)
Q Consensus 260 WP~l~~i~~~~~G~~---~~y~~~l~~~~g~~~~~~~~~y~aSEg~~gi~~~~~-~-~~~~~~~~l~p~~~ffEFip~~~ 334 (565)
+++ +.++++||. ....+++.+.++ ++++ ..||.||+....-..+. . .+...+.. +|+.. ...++.+.
T Consensus 304 ~~~---l~~~~~gG~~~~~~~~~~~~~~~~--~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~G~~-~~g~~-~~i~d~~~ 375 (546)
T PRK08314 304 LSS---LRYIGGGGAAMPEAVAERLKELTG--LDYV-EGYGLTETMAQTHSNPPDRPKLQCLGIP-TFGVD-ARVIDPET 375 (546)
T ss_pred chh---hheeeeccccCCHHHHHHHHHHcC--CcEE-ecccccccccceecCCCcCCCCCccCcc-cCCeE-EEEEeCCC
Confidence 455 556666762 244566666665 7787 99999998532212111 0 01111221 22221 22222211
Q ss_pred CCCccccccccccccCCCCceeeccCcccCCeEEEEeccc---ccee-----------------eeecCCEEEEeeeeCC
Q 044130 335 ENGTLLSMEFNEEEEVPNDKLVDLGHVRVGHYYELVVTTF---AGLN-----------------RYRIGDVLQVTGFYNR 394 (565)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~v~l~eve~G~~YelViTt~---~GLy-----------------RYriGDvV~v~gf~~~ 394 (565)
. ..+..|+..||+|... .|.| -|++||++++..
T Consensus 376 ------------------~-----~~~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~f~~~~~~~~~~TGDl~~~~~---- 428 (546)
T PRK08314 376 ------------------L-----EELPPGEVGEIVVHGPQVFKGYWNRPEATAEAFIEIDGKRFFRTGDLGRMDE---- 428 (546)
T ss_pred ------------------C-----cCCCCCCceEEEEECCchhccccCChhHhhhhhhhcCCCceEecCCEEEEcC----
Confidence 1 2356888999999753 2322 489999988863
Q ss_pred CCEEEEEeecCceeeeeecccCHHHHHHHHHHH
Q 044130 395 APQFRFICRRNVVLSIDNDKTNEEDLHKSVTIA 427 (565)
Q Consensus 395 ~P~i~F~gR~~~~l~i~GEkl~e~~v~~av~~~ 427 (565)
.-.+.++||.++++.+.|++++..+|+.+|.+.
T Consensus 429 ~g~l~~~GR~~d~i~~~G~~v~~~eIE~~i~~~ 461 (546)
T PRK08314 429 EGYFFITDRLKRMINASGFKVWPAEVENLLYKH 461 (546)
T ss_pred CCcEEEEecchhhEEeCCEEECHHHHHHHHHhC
Confidence 247899999999999999999999999999763
No 49
>PRK13383 acyl-CoA synthetase; Provisional
Probab=97.87 E-value=0.00056 Score=75.65 Aligned_cols=128 Identities=12% Similarity=0.078 Sum_probs=81.6
Q ss_pred EEEEEecch---hhhHHHHHHhcCCCCceecccccccceeeeecCCCCC---CCCCceeeecCCceeEEeeeCCCCCCcc
Q 044130 266 IEAVVTGSM---AQYIPSLEYYSAGKLPLVGTMYASSECYFGVNLKPLS---NPADVSFTLLPNMCYFEFLPLGGENGTL 339 (565)
Q Consensus 266 i~~~~~G~~---~~y~~~l~~~~g~~~~~~~~~y~aSEg~~gi~~~~~~---~~~~~~~~l~p~~~ffEFip~~~~~~~~ 339 (565)
+..+++||. ...+.++++.+| .+++ ..||.||+....-..+.. .++..+. .+|+. =++.++.+
T Consensus 294 lr~i~~gG~~l~~~~~~~~~~~~g--~~v~-~~YG~tE~~~~~~~~~~~~~~~~~~~G~-~~~~~-~~~i~d~~------ 362 (516)
T PRK13383 294 LRVVMSSGDRLDPTLGQRFMDTYG--DILY-NGYGSTEVGIGALATPADLRDAPETVGK-PVAGC-PVRILDRN------ 362 (516)
T ss_pred eEEEEECCCCCCHHHHHHHHHHcC--chhh-hcccccccccceeccccccccCCCcccC-CCCCc-EEEEECCC------
Confidence 666777763 345567777776 6677 999999985321111110 0111121 12221 24444322
Q ss_pred ccccccccccCCCCceeeccCcccCCeEEEEecccccee-------------eeecCCEEEEeeeeCCCCEEEEEeecCc
Q 044130 340 LSMEFNEEEEVPNDKLVDLGHVRVGHYYELVVTTFAGLN-------------RYRIGDVLQVTGFYNRAPQFRFICRRNV 406 (565)
Q Consensus 340 ~~~~~~~~~~~~~~~~v~l~eve~G~~YelViTt~~GLy-------------RYriGDvV~v~gf~~~~P~i~F~gR~~~ 406 (565)
.+ .+..|+..||++++..-.. .|++||+.++.. + -.+.|+||.++
T Consensus 363 -------------~~-----~~~~g~~Gel~v~g~~~~~~Y~~~~~~~~~~g~~~TGDl~~~d~--~--G~l~i~GR~~~ 420 (516)
T PRK13383 363 -------------NR-----PVGPRVTGRIFVGGELAGTRYTDGGGKAVVDGMTSTGDMGYLDN--A--GRLFIVGREDD 420 (516)
T ss_pred -------------CC-----CCCCCCceEEEEecCcccccccCCchhheecCceecceeEEEcC--C--ccEEEeccccc
Confidence 11 2447888999998653333 356999988864 2 36789999999
Q ss_pred eeeeeecccCHHHHHHHHHH
Q 044130 407 VLSIDNDKTNEEDLHKSVTI 426 (565)
Q Consensus 407 ~l~i~GEkl~e~~v~~av~~ 426 (565)
++.+.|++++..+|+.++.+
T Consensus 421 ~i~~~G~~v~~~eiE~~l~~ 440 (516)
T PRK13383 421 MIISGGENVYPRAVENALAA 440 (516)
T ss_pred eEEECCEEECHHHHHHHHHh
Confidence 99999999999999999965
No 50
>PLN02246 4-coumarate--CoA ligase
Probab=97.86 E-value=0.00073 Score=75.09 Aligned_cols=130 Identities=11% Similarity=0.092 Sum_probs=82.1
Q ss_pred EEEEEecch---hhhHHHHHHhcCCCCceecccccccceee--eecCCCC-----CCCCCceeeecCCceeEEeeeCCCC
Q 044130 266 IEAVVTGSM---AQYIPSLEYYSAGKLPLVGTMYASSECYF--GVNLKPL-----SNPADVSFTLLPNMCYFEFLPLGGE 335 (565)
Q Consensus 266 i~~~~~G~~---~~y~~~l~~~~g~~~~~~~~~y~aSEg~~--gi~~~~~-----~~~~~~~~~l~p~~~ffEFip~~~~ 335 (565)
+..++.||. ......+++.+++ +++. ..||+||+.. +.+.... ..++..+.. +++ .-.+.++.+.
T Consensus 300 lr~~~~gg~~l~~~~~~~~~~~~~~-~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~G~~-~~~-~~~~i~d~~~- 374 (537)
T PLN02246 300 IRMVLSGAAPLGKELEDAFRAKLPN-AVLG-QGYGMTEAGPVLAMCLAFAKEPFPVKSGSCGTV-VRN-AELKIVDPET- 374 (537)
T ss_pred eeEEEEecCcCCHHHHHHHHHHcCC-CeEe-ccccccccCcccccccccCCCCccccCCccccc-cCC-cEEEEecCCC-
Confidence 666677763 3455677777766 7777 8999999842 2111100 001111221 121 1223333221
Q ss_pred CCccccccccccccCCCCceeeccCcccCCeEEEEeccc---ccee--------------eeecCCEEEEeeeeCCCCEE
Q 044130 336 NGTLLSMEFNEEEEVPNDKLVDLGHVRVGHYYELVVTTF---AGLN--------------RYRIGDVLQVTGFYNRAPQF 398 (565)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~v~l~eve~G~~YelViTt~---~GLy--------------RYriGDvV~v~gf~~~~P~i 398 (565)
. ..+..|+..||+|+.. .|.| -|++||+.++.. .+ .+
T Consensus 375 -----------------~-----~~~~~g~~Gel~v~g~~~~~GY~~~~~~~~~~~~~~~~~~TGD~~~~~~--~g--~l 428 (537)
T PLN02246 375 -----------------G-----ASLPRNQPGEICIRGPQIMKGYLNDPEATANTIDKDGWLHTGDIGYIDD--DD--EL 428 (537)
T ss_pred -----------------C-----CcCCCCCceEEEEECCchhccccCCchhhhhcccCCCCeeecceEEEeC--CC--eE
Confidence 1 1255788999999853 2322 378999998874 22 68
Q ss_pred EEEeecCceeeeeecccCHHHHHHHHHH
Q 044130 399 RFICRRNVVLSIDNDKTNEEDLHKSVTI 426 (565)
Q Consensus 399 ~F~gR~~~~l~i~GEkl~e~~v~~av~~ 426 (565)
.|+||.++++++.|++++..+|+.++..
T Consensus 429 ~~~GR~dd~i~~~G~~i~~~eIE~~l~~ 456 (537)
T PLN02246 429 FIVDRLKELIKYKGFQVAPAELEALLIS 456 (537)
T ss_pred EEEecccceEEECCEEECcHHHHHHHHh
Confidence 8999999999999999999999999975
No 51
>PRK08316 acyl-CoA synthetase; Validated
Probab=97.86 E-value=0.0001 Score=80.93 Aligned_cols=129 Identities=14% Similarity=0.183 Sum_probs=81.5
Q ss_pred EEEEEecc---hhhhHHHHHHhcCCCCceeccccccccee-eeecCCCC---CCCCCceeeecCCceeEEeeeCCCCCCc
Q 044130 266 IEAVVTGS---MAQYIPSLEYYSAGKLPLVGTMYASSECY-FGVNLKPL---SNPADVSFTLLPNMCYFEFLPLGGENGT 338 (565)
Q Consensus 266 i~~~~~G~---~~~y~~~l~~~~g~~~~~~~~~y~aSEg~-~gi~~~~~---~~~~~~~~~l~p~~~ffEFip~~~~~~~ 338 (565)
+..+.+|| .....+.+++.+++ ++++ ..||+||+. ++.-..+. ..+...+.. +++. -...++.+
T Consensus 288 l~~~~~gg~~~~~~~~~~~~~~~~~-~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~~G~~-~~~~-~~~i~~~~----- 358 (523)
T PRK08316 288 LRKGYYGASIMPVEVLKELRERLPG-LRFY-NCYGQTEIAPLATVLGPEEHLRRPGSAGRP-VLNV-ETRVVDDD----- 358 (523)
T ss_pred ceEEEEcCCcCCHHHHHHHHHHcCC-Ccee-eeecccccCccccccCccccccccCCcccC-CCCc-EEEEEcCC-----
Confidence 55555565 23456777887766 8888 999999973 22111110 001111211 1111 12222211
Q ss_pred cccccccccccCCCCceeeccCcccCCeEEEEeccc---ccee-------------eeecCCEEEEeeeeCCCCEEEEEe
Q 044130 339 LLSMEFNEEEEVPNDKLVDLGHVRVGHYYELVVTTF---AGLN-------------RYRIGDVLQVTGFYNRAPQFRFIC 402 (565)
Q Consensus 339 ~~~~~~~~~~~~~~~~~v~l~eve~G~~YelViTt~---~GLy-------------RYriGDvV~v~gf~~~~P~i~F~g 402 (565)
... +..|+..||++++. .|.| .|++||++++.. ...+.|+|
T Consensus 359 --------------~~~-----~~~g~~Gei~v~~~~~~~~y~~~~~~~~~~~~~~~~~TGDl~~~~~----~g~l~i~g 415 (523)
T PRK08316 359 --------------GND-----VAPGEVGEIVHRSPQLMLGYWDDPEKTAEAFRGGWFHSGDLGVMDE----EGYITVVD 415 (523)
T ss_pred --------------CCC-----CCCCCcceEEEECCchhhhhcCCHHHHHHHhhCCCeeccceEEEcC----CceEEEec
Confidence 122 44688899999875 2333 399999988863 24688999
Q ss_pred ecCceeeeeecccCHHHHHHHHHH
Q 044130 403 RRNVVLSIDNDKTNEEDLHKSVTI 426 (565)
Q Consensus 403 R~~~~l~i~GEkl~e~~v~~av~~ 426 (565)
|.++++.+.|++++..+|+.++.+
T Consensus 416 R~~~~i~~~G~~i~~~~iE~~l~~ 439 (523)
T PRK08316 416 RKKDMIKTGGENVASREVEEALYT 439 (523)
T ss_pred ccccEEEeCCeEECHHHHHHHHHh
Confidence 999999999999999999999965
No 52
>PRK12583 acyl-CoA synthetase; Provisional
Probab=97.86 E-value=0.00047 Score=76.69 Aligned_cols=129 Identities=10% Similarity=0.072 Sum_probs=82.9
Q ss_pred EEEEEecc---hhhhHHHHHHhcCCCCceecccccccceeeeecCCCCC-----CCCCceeeecCCceeEEeeeCCCCCC
Q 044130 266 IEAVVTGS---MAQYIPSLEYYSAGKLPLVGTMYASSECYFGVNLKPLS-----NPADVSFTLLPNMCYFEFLPLGGENG 337 (565)
Q Consensus 266 i~~~~~G~---~~~y~~~l~~~~g~~~~~~~~~y~aSEg~~gi~~~~~~-----~~~~~~~~l~p~~~ffEFip~~~~~~ 337 (565)
|..+++|| ......++.+.++. .++. ..||+||+....-....+ .+...|. ..|+ ..++.++.+
T Consensus 319 lr~i~~~G~~~~~~~~~~~~~~~~~-~~i~-~~YG~tE~~~~~~~~~~~~~~~~~~~~vG~-p~~~-~~~~i~d~~---- 390 (558)
T PRK12583 319 LRTGIMAGAPCPIEVMRRVMDEMHM-AEVQ-IAYGMTETSPVSLQTTAADDLERRVETVGR-TQPH-LEVKVVDPD---- 390 (558)
T ss_pred heEEEecCCCCCHHHHHHHHHHcCC-ccee-ccccccccccceeccCcccccccccCCCCc-cCCC-CeEEEECCC----
Confidence 55656665 23455667777775 6676 899999985321111100 0112222 1222 234555432
Q ss_pred ccccccccccccCCCCceeeccCcccCCeEEEEeccc---ccee--------------eeecCCEEEEeeeeCCCCEEEE
Q 044130 338 TLLSMEFNEEEEVPNDKLVDLGHVRVGHYYELVVTTF---AGLN--------------RYRIGDVLQVTGFYNRAPQFRF 400 (565)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~v~l~eve~G~~YelViTt~---~GLy--------------RYriGDvV~v~gf~~~~P~i~F 400 (565)
. .++..|+.+||+|++. .|+| .|++||++++.. + -.+.|
T Consensus 391 ---------------~-----~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~~~TGDl~~~~~--d--g~l~i 446 (558)
T PRK12583 391 ---------------G-----ATVPRGEIGELCTRGYSVMKGYWNNPEATAESIDEDGWMHTGDLATMDE--Q--GYVRI 446 (558)
T ss_pred ---------------C-----CCCCCCCeeEEEEEeCccchhhcCChHHHHhhcCCCCCeeccceEEECC--C--ccEEE
Confidence 1 1356888999999774 2332 389999999864 2 37899
Q ss_pred EeecCceeeeeecccCHHHHHHHHHH
Q 044130 401 ICRRNVVLSIDNDKTNEEDLHKSVTI 426 (565)
Q Consensus 401 ~gR~~~~l~i~GEkl~e~~v~~av~~ 426 (565)
.||.++++.+.|++++..+|++++..
T Consensus 447 ~GR~~~~i~~~G~~v~~~~IE~~l~~ 472 (558)
T PRK12583 447 VGRSKDMIIRGGENIYPREIEEFLFT 472 (558)
T ss_pred EecccceeEECCEEeCHHHHHHHHHh
Confidence 99999999999999999999999865
No 53
>TIGR02275 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase. Proteins in this family belong to the AMP-binding enzyme family (pfam00501). Members activate 2,3-dihydroxybenzoate (DHB) by ligation of AMP from ATP with the release of pyrophosphate; many are involved in synthesis of siderophores such as enterobactin, vibriobactin, vulnibactin, etc. The most closely related proteine believed to differ in function activates salicylate rather than DHB.
Probab=97.84 E-value=0.00013 Score=80.94 Aligned_cols=129 Identities=12% Similarity=0.100 Sum_probs=81.5
Q ss_pred EEEEEecch---hhhHHHHHHhcCCCCceecccccccceeeeec-CCCC--CCCCCceeeecCCceeEEeeeCCCCCCcc
Q 044130 266 IEAVVTGSM---AQYIPSLEYYSAGKLPLVGTMYASSECYFGVN-LKPL--SNPADVSFTLLPNMCYFEFLPLGGENGTL 339 (565)
Q Consensus 266 i~~~~~G~~---~~y~~~l~~~~g~~~~~~~~~y~aSEg~~gi~-~~~~--~~~~~~~~~l~p~~~ffEFip~~~~~~~~ 339 (565)
+.++++||. .....++++.+| ++++ ..||.||+.+... .... ......+..+-++ ...+.++.+
T Consensus 301 lr~~~~gG~~l~~~~~~~~~~~~g--~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~~~~-~~v~i~d~~------ 370 (527)
T TIGR02275 301 LKLLQVGGAKFSEAAARRVPAVFG--CQLQ-QVFGMAEGLVNYTRLDDPAEIIFTTQGRPMSPD-DEVRVVDDH------ 370 (527)
T ss_pred eEEEEEcCCCCCHHHHHHHHHHhC--CeEE-eeeccCccCccccCCCCccccccccCCCCCCCC-ceEEEECCC------
Confidence 677777773 344566666665 7887 9999999754321 1100 0001122222111 122333211
Q ss_pred ccccccccccCCCCceeeccCcccCCeEEEEeccc---ccee--------------eeecCCEEEEeeeeCCCCEEEEEe
Q 044130 340 LSMEFNEEEEVPNDKLVDLGHVRVGHYYELVVTTF---AGLN--------------RYRIGDVLQVTGFYNRAPQFRFIC 402 (565)
Q Consensus 340 ~~~~~~~~~~~~~~~~v~l~eve~G~~YelViTt~---~GLy--------------RYriGDvV~v~gf~~~~P~i~F~g 402 (565)
.++ +..|+..||+++.. .|.| -|++||+.++.. ...+.|+|
T Consensus 371 -------------g~~-----~~~g~~Gei~v~g~~~~~gY~~~~~~~~~~~~~dg~~~TGDl~~~~~----~g~l~~~g 428 (527)
T TIGR02275 371 -------------GNP-----VAPGETGMLLTRGPYTFRGYYKAPEHNAAAFDAEGFYYTGDLVRLTP----EGYIVVVG 428 (527)
T ss_pred -------------CCC-----CCCCCceEEEecCCccchhhcCChhHhHhhcCcCCCEEcCceEEEcC----CccEEEEe
Confidence 112 45789999999753 2332 299999999863 33578999
Q ss_pred ecCceeeeeecccCHHHHHHHHHH
Q 044130 403 RRNVVLSIDNDKTNEEDLHKSVTI 426 (565)
Q Consensus 403 R~~~~l~i~GEkl~e~~v~~av~~ 426 (565)
|.++++.+.|+++...+|+++|.+
T Consensus 429 R~~d~i~~~G~~v~~~eiE~~l~~ 452 (527)
T TIGR02275 429 RAKDQINRGGEKIAAEEIENLLLA 452 (527)
T ss_pred cccceeecCCEEECHHHHHHHHHh
Confidence 999999999999999999999865
No 54
>PLN02330 4-coumarate--CoA ligase-like 1
Probab=97.82 E-value=8.5e-05 Score=82.78 Aligned_cols=130 Identities=16% Similarity=0.260 Sum_probs=82.8
Q ss_pred EEEEEecch---hhhHHHHHHhcCCCCceeccccccccee-eeecCC-CC-----CCCCCceeeecCCceeEEeeeCCCC
Q 044130 266 IEAVVTGSM---AQYIPSLEYYSAGKLPLVGTMYASSECY-FGVNLK-PL-----SNPADVSFTLLPNMCYFEFLPLGGE 335 (565)
Q Consensus 266 i~~~~~G~~---~~y~~~l~~~~g~~~~~~~~~y~aSEg~-~gi~~~-~~-----~~~~~~~~~l~p~~~ffEFip~~~~ 335 (565)
+.++++||. ...++++++.+++ ++++ ..||+||+. +++... +. ..+...+.. +|+.. .+.++.+.
T Consensus 305 l~~i~~~g~~l~~~~~~~~~~~~~~-~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~~~~vG~~-~~~~~-v~i~d~~~- 379 (546)
T PLN02330 305 LQAIMTAAAPLAPELLTAFEAKFPG-VQVQ-EAYGLTEHSCITLTHGDPEKGHGIAKKNSVGFI-LPNLE-VKFIDPDT- 379 (546)
T ss_pred eeeEEEcCCcCCHHHHHHHHHHcCC-CeEE-ecccccccccceecCCCccccccccccCccccc-cCCcE-EEEEeCCC-
Confidence 455566662 3556777777766 8988 999999973 332211 10 000112221 22221 34443221
Q ss_pred CCccccccccccccCCCCceeeccCcccCCeEEEEeccc---ccee--------------eeecCCEEEEeeeeCCCCEE
Q 044130 336 NGTLLSMEFNEEEEVPNDKLVDLGHVRVGHYYELVVTTF---AGLN--------------RYRIGDVLQVTGFYNRAPQF 398 (565)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~v~l~eve~G~~YelViTt~---~GLy--------------RYriGDvV~v~gf~~~~P~i 398 (565)
.+ .+.+|+.+||+|+.. .|.| -|++||++++.. ++ .+
T Consensus 380 -----------------~~-----~~p~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~g~~~TGD~~~~~~--dG--~l 433 (546)
T PLN02330 380 -----------------GR-----SLPKNTPGELCVRSQCVMQGYYNNKEETDRTIDEDGWLHTGDIGYIDD--DG--DI 433 (546)
T ss_pred -----------------Cc-----cCCCCCceEEEEecchhhhhhccCccchhhhccCCCceecccEEEEeC--CC--cE
Confidence 11 245788999999753 2322 289999999874 22 58
Q ss_pred EEEeecCceeeeeecccCHHHHHHHHHH
Q 044130 399 RFICRRNVVLSIDNDKTNEEDLHKSVTI 426 (565)
Q Consensus 399 ~F~gR~~~~l~i~GEkl~e~~v~~av~~ 426 (565)
.|+||.++++++.|++++..+|+.++..
T Consensus 434 ~~~GR~~d~i~~~G~~v~~~~iE~~l~~ 461 (546)
T PLN02330 434 FIVDRIKELIKYKGFQVAPAELEAILLT 461 (546)
T ss_pred EEEechHHhhhcCCEEECHHHHHHHHHh
Confidence 8999999999999999999999999965
No 55
>PRK06710 long-chain-fatty-acid--CoA ligase; Validated
Probab=97.82 E-value=8.9e-05 Score=82.87 Aligned_cols=130 Identities=17% Similarity=0.140 Sum_probs=83.5
Q ss_pred EEEEEecch---hhhHHHHHHhcCCCCceecccccccceee-eecC--CCCCCCCCceeeecCCceeEEeeeCCCCCCcc
Q 044130 266 IEAVVTGSM---AQYIPSLEYYSAGKLPLVGTMYASSECYF-GVNL--KPLSNPADVSFTLLPNMCYFEFLPLGGENGTL 339 (565)
Q Consensus 266 i~~~~~G~~---~~y~~~l~~~~g~~~~~~~~~y~aSEg~~-gi~~--~~~~~~~~~~~~l~p~~~ffEFip~~~~~~~~ 339 (565)
+.++++||. .....++++.++ ++++ ..||+||+.. +... .....++..+ ..+|+.. .+.++.++
T Consensus 325 lr~v~~gg~~~~~~~~~~~~~~~~--~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~G-~~~~~~~-~~i~~~~~----- 394 (563)
T PRK06710 325 IRACISGSAPLPVEVQEKFETVTG--GKLV-EGYGLTESSPVTHSNFLWEKRVPGSIG-VPWPDTE-AMIMSLET----- 394 (563)
T ss_pred hhheeeCCCcCCHHHHHHHHHhhC--CCEe-cccccccCccccccCcccccccCCccC-CCCCCCe-EEEEECCC-----
Confidence 455566662 345566777675 6777 8999999743 2110 0111111112 2334432 34444332
Q ss_pred ccccccccccCCCCceeeccCcccCCeEEEEeccc---cceee-------------eecCCEEEEeeeeCCCCEEEEEee
Q 044130 340 LSMEFNEEEEVPNDKLVDLGHVRVGHYYELVVTTF---AGLNR-------------YRIGDVLQVTGFYNRAPQFRFICR 403 (565)
Q Consensus 340 ~~~~~~~~~~~~~~~~v~l~eve~G~~YelViTt~---~GLyR-------------YriGDvV~v~gf~~~~P~i~F~gR 403 (565)
.+ .+..|+..||++++. .|.|. |++||+++... .-.+.|+||
T Consensus 395 -------------~~-----~~~~g~~Gel~v~g~~~~~gY~~~~~~~~~~~~~g~~~TGD~~~~~~----~g~~~~~GR 452 (563)
T PRK06710 395 -------------GE-----ALPPGEIGEIVVKGPQIMKGYWNKPEETAAVLQDGWLHTGDVGYMDE----DGFFYVKDR 452 (563)
T ss_pred -------------Cc-----cCCCCCceEEEEecCccchhhhCChHHHhhhcccCcccccceEEEcC----CCcEEEeec
Confidence 11 245788999999875 34443 99999987753 336899999
Q ss_pred cCceeeeeecccCHHHHHHHHHHH
Q 044130 404 RNVVLSIDNDKTNEEDLHKSVTIA 427 (565)
Q Consensus 404 ~~~~l~i~GEkl~e~~v~~av~~~ 427 (565)
.++++.+.|++++..+|+.++...
T Consensus 453 ~dd~i~~~G~~v~p~eiE~~l~~~ 476 (563)
T PRK06710 453 KKDMIVASGFNVYPREVEEVLYEH 476 (563)
T ss_pred cccEEEECCEEECHHHHHHHHHhC
Confidence 999999999999999999999663
No 56
>PRK13382 acyl-CoA synthetase; Provisional
Probab=97.81 E-value=0.00074 Score=75.28 Aligned_cols=128 Identities=12% Similarity=0.112 Sum_probs=83.0
Q ss_pred EEEEEecc---hhhhHHHHHHhcCCCCceecccccccceeeeecCCC---CCCCCCceeeecCCceeEEeeeCCCCCCcc
Q 044130 266 IEAVVTGS---MAQYIPSLEYYSAGKLPLVGTMYASSECYFGVNLKP---LSNPADVSFTLLPNMCYFEFLPLGGENGTL 339 (565)
Q Consensus 266 i~~~~~G~---~~~y~~~l~~~~g~~~~~~~~~y~aSEg~~gi~~~~---~~~~~~~~~~l~p~~~ffEFip~~~~~~~~ 339 (565)
+..++.|| ....+.++++.+| .+++ .+||+||+....-..+ ...++..|. ..|+. -++.++.+
T Consensus 314 lr~i~~gG~~l~~~~~~~~~~~~~--~~i~-~~YG~TE~~~~~~~~~~~~~~~~~~vG~-p~~~~-~~~i~d~~------ 382 (537)
T PRK13382 314 LRFAAASGSRMRPDVVIAFMDQFG--DVIY-NNYNATEAGMIATATPADLRAAPDTAGR-PAEGT-EIRILDQD------ 382 (537)
T ss_pred eeEEEEcCCCCCHHHHHHHHHHcC--CcEE-ecccccccCcceecChhHhccCCCCccc-cCcCc-EEEEECCC------
Confidence 56667776 2355677777777 5677 9999999853211111 001112222 12222 34455422
Q ss_pred ccccccccccCCCCceeeccCcccCCeEEEEecccc---ce----------eeeecCCEEEEeeeeCCCCEEEEEeecCc
Q 044130 340 LSMEFNEEEEVPNDKLVDLGHVRVGHYYELVVTTFA---GL----------NRYRIGDVLQVTGFYNRAPQFRFICRRNV 406 (565)
Q Consensus 340 ~~~~~~~~~~~~~~~~v~l~eve~G~~YelViTt~~---GL----------yRYriGDvV~v~gf~~~~P~i~F~gR~~~ 406 (565)
.+ .+..|+..||+|++.+ |. -.|++||+++... . -.+.|+||.++
T Consensus 383 -------------~~-----~~~~g~~GEl~v~g~~~~~gY~~~~~~~~~~g~~~TGDl~~~~~--~--g~l~~~GR~dd 440 (537)
T PRK13382 383 -------------FR-----EVPTGEVGTIFVRNDTQFDGYTSGSTKDFHDGFMASGDVGYLDE--N--GRLFVVGRDDE 440 (537)
T ss_pred -------------CC-----CCCCCCeeEEEEEcCCcccCccccchhhccCCCEeeCceEEEeC--C--CcEEEeccccc
Confidence 11 2457889999998742 11 2589999999864 2 25889999999
Q ss_pred eeeeeecccCHHHHHHHHHH
Q 044130 407 VLSIDNDKTNEEDLHKSVTI 426 (565)
Q Consensus 407 ~l~i~GEkl~e~~v~~av~~ 426 (565)
++.+.|++++..+|+.++.+
T Consensus 441 ~ik~~G~~v~~~eIE~~l~~ 460 (537)
T PRK13382 441 MIVSGGENVYPIEVEKTLAT 460 (537)
T ss_pred eeEECCEEECHHHHHHHHHh
Confidence 99999999999999999965
No 57
>PRK08751 putative long-chain fatty acyl CoA ligase; Provisional
Probab=97.80 E-value=0.00012 Score=81.61 Aligned_cols=129 Identities=13% Similarity=0.226 Sum_probs=81.3
Q ss_pred EEEEEecch---hhhHHHHHHhcCCCCceecccccccceeeeecCCCCC---CCCCceeeecCCceeEEeeeCCCCCCcc
Q 044130 266 IEAVVTGSM---AQYIPSLEYYSAGKLPLVGTMYASSECYFGVNLKPLS---NPADVSFTLLPNMCYFEFLPLGGENGTL 339 (565)
Q Consensus 266 i~~~~~G~~---~~y~~~l~~~~g~~~~~~~~~y~aSEg~~gi~~~~~~---~~~~~~~~l~p~~~ffEFip~~~~~~~~ 339 (565)
|..+.+||. .....++++.+| ++++ ..||+||+...+...+.. .+...+. .+|+. -...++.+
T Consensus 331 lr~v~~gG~~~~~~~~~~~~~~~~--~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~vG~-~~~~~-~v~i~d~~------ 399 (560)
T PRK08751 331 LKMTLGGGMAVQRSVAERWKQVTG--LTLV-EAYGLTETSPAACINPLTLKEYNGSIGL-PIPST-DACIKDDA------ 399 (560)
T ss_pred heeeeeCCCCCCHHHHHHHHHHhC--CeEE-EeeccccCCCceecccccccccCCCcCc-cCCCc-eEEEECCC------
Confidence 555666662 344566777675 7777 899999985332221110 0111121 11221 12223211
Q ss_pred ccccccccccCCCCceeeccCcccCCeEEEEeccc---cceee--------------eecCCEEEEeeeeCCCCEEEEEe
Q 044130 340 LSMEFNEEEEVPNDKLVDLGHVRVGHYYELVVTTF---AGLNR--------------YRIGDVLQVTGFYNRAPQFRFIC 402 (565)
Q Consensus 340 ~~~~~~~~~~~~~~~~v~l~eve~G~~YelViTt~---~GLyR--------------YriGDvV~v~gf~~~~P~i~F~g 402 (565)
.. .+..|+.+||+|++. .|.|. |++||++++.. .-.+.++|
T Consensus 400 -------------~~-----~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~g~~~TGD~~~~~~----~g~l~i~G 457 (560)
T PRK08751 400 -------------GT-----VLAIGEIGELCIKGPQVMKGYWKRPEETAKVMDADGWLHTGDIARMDE----QGFVYIVD 457 (560)
T ss_pred -------------CC-----CCCCCCceEEEEecCccchhhcCChhhhhhccccCCCccccceEEEcC----CceEEEEe
Confidence 11 245788899999775 23321 89999998863 23789999
Q ss_pred ecCceeeeeecccCHHHHHHHHHHH
Q 044130 403 RRNVVLSIDNDKTNEEDLHKSVTIA 427 (565)
Q Consensus 403 R~~~~l~i~GEkl~e~~v~~av~~~ 427 (565)
|.++++.+.|+++...+|+.++...
T Consensus 458 R~~d~i~~~G~~v~p~eiE~~l~~~ 482 (560)
T PRK08751 458 RKKDMILVSGFNVYPNEIEDVIAMM 482 (560)
T ss_pred echhheeECCEEEcHHHHHHHHHhC
Confidence 9999999999999999999999653
No 58
>PRK13390 acyl-CoA synthetase; Provisional
Probab=97.80 E-value=0.00097 Score=73.27 Aligned_cols=62 Identities=11% Similarity=0.099 Sum_probs=50.8
Q ss_pred cccCCeEEEEeccccceee-------------------eecCCEEEEeeeeCCCCEEEEEeecCceeeeeecccCHHHHH
Q 044130 361 VRVGHYYELVVTTFAGLNR-------------------YRIGDVLQVTGFYNRAPQFRFICRRNVVLSIDNDKTNEEDLH 421 (565)
Q Consensus 361 ve~G~~YelViTt~~GLyR-------------------YriGDvV~v~gf~~~~P~i~F~gR~~~~l~i~GEkl~e~~v~ 421 (565)
+..|+..||+|.+.+-..+ |++||++++.. .-.+.|+||.++++++.|+++++.+|+
T Consensus 343 ~~~g~~Gel~v~~~~~~~gy~~~~~~t~~~~~~~~~~w~~tGDl~~~~~----dg~l~~~gR~~~~i~~~G~~v~p~eIE 418 (501)
T PRK13390 343 LPAGRIGTVYFERDRLPFRYLNDPEKTAAAQHPAHPFWTTVGDLGSVDE----DGYLYLADRKSFMIISGGVNIYPQETE 418 (501)
T ss_pred CCCCCceEEEEecCCccccccCChhhhHHhhccCCCceEEcCceEEECC----CCeEEEeeccccceeECCeeeCHHHHH
Confidence 4589999999977543322 48999999864 236899999999999999999999999
Q ss_pred HHHHH
Q 044130 422 KSVTI 426 (565)
Q Consensus 422 ~av~~ 426 (565)
.++..
T Consensus 419 ~~l~~ 423 (501)
T PRK13390 419 NALTM 423 (501)
T ss_pred HHHHh
Confidence 99964
No 59
>PRK07656 long-chain-fatty-acid--CoA ligase; Validated
Probab=97.79 E-value=0.0002 Score=78.50 Aligned_cols=129 Identities=16% Similarity=0.130 Sum_probs=82.6
Q ss_pred EEEEEecch---hhhHHHHHHhcCCCCceeccccccccee-e-eecCCCC-CC--CCCceeeecCCceeEEeeeCCCCCC
Q 044130 266 IEAVVTGSM---AQYIPSLEYYSAGKLPLVGTMYASSECY-F-GVNLKPL-SN--PADVSFTLLPNMCYFEFLPLGGENG 337 (565)
Q Consensus 266 i~~~~~G~~---~~y~~~l~~~~g~~~~~~~~~y~aSEg~-~-gi~~~~~-~~--~~~~~~~l~p~~~ffEFip~~~~~~ 337 (565)
+..+++||. ...+.++++.+|. .+++ ..||+||+. + ..+.... .. +...+ ..+|+ .-++.++.+
T Consensus 283 l~~v~~~g~~~~~~~~~~~~~~~~~-~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~~vG-~~~~~-~~~~i~d~~---- 354 (513)
T PRK07656 283 LRLAVTGAASMPVALLERFESELGV-DIVL-TGYGLSEASGVTTFNRLDDDRKTVAGTIG-TAIAG-VENKIVNEL---- 354 (513)
T ss_pred eeeEEecCCCCCHHHHHHHHHHcCC-CceE-eEEccccCCCceeecCccccccccCCCcc-ccCCC-cEEEEECCC----
Confidence 666676662 3455667777763 3777 999999983 2 2211100 00 11111 12222 223444321
Q ss_pred ccccccccccccCCCCceeeccCcccCCeEEEEecccc---cee----------e----eecCCEEEEeeeeCCCCEEEE
Q 044130 338 TLLSMEFNEEEEVPNDKLVDLGHVRVGHYYELVVTTFA---GLN----------R----YRIGDVLQVTGFYNRAPQFRF 400 (565)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~v~l~eve~G~~YelViTt~~---GLy----------R----YriGDvV~v~gf~~~~P~i~F 400 (565)
. ..+..|+..||+|++.. |.| + |++||+.+... .-.+.+
T Consensus 355 ---------------~-----~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~tGDl~~~~~----~g~~~~ 410 (513)
T PRK07656 355 ---------------G-----EEVPVGEVGELLVRGPNVMKGYYDDPEATAAAIDADGWLHTGDLGRLDE----EGYLYI 410 (513)
T ss_pred ---------------C-----CCCCCCCceEEEEEcchhhhhhcCCHHHHhhhhccCCceeccceEEEcC----CeeEEE
Confidence 1 22568899999998753 222 2 89999998853 337899
Q ss_pred EeecCceeeeeecccCHHHHHHHHHH
Q 044130 401 ICRRNVVLSIDNDKTNEEDLHKSVTI 426 (565)
Q Consensus 401 ~gR~~~~l~i~GEkl~e~~v~~av~~ 426 (565)
+||.++++.+.|++++..+|++++..
T Consensus 411 ~GR~~d~i~~~G~~v~~~~iE~~l~~ 436 (513)
T PRK07656 411 VDRKKDMFIVGGFNVYPAEVEEVLYE 436 (513)
T ss_pred EecccceEEeCCEEeCHHHHHHHHHh
Confidence 99999999999999999999999965
No 60
>PRK07470 acyl-CoA synthetase; Validated
Probab=97.78 E-value=0.00018 Score=79.66 Aligned_cols=62 Identities=15% Similarity=0.191 Sum_probs=51.4
Q ss_pred cccCCeEEEEeccc---cceee-------------eecCCEEEEeeeeCCCCEEEEEeecCceeeeeecccCHHHHHHHH
Q 044130 361 VRVGHYYELVVTTF---AGLNR-------------YRIGDVLQVTGFYNRAPQFRFICRRNVVLSIDNDKTNEEDLHKSV 424 (565)
Q Consensus 361 ve~G~~YelViTt~---~GLyR-------------YriGDvV~v~gf~~~~P~i~F~gR~~~~l~i~GEkl~e~~v~~av 424 (565)
+..|+..||+|++. .|.|. |++||+.++.. ...+.+.||.++++.+.|+++...+|+.+|
T Consensus 361 ~~~g~~Gel~i~~~~~~~gy~~~~~~~~~~~~~~~~~TGDl~~~~~----~g~l~~~GR~dd~i~~~G~~v~~~~IE~~l 436 (528)
T PRK07470 361 LPPGETGEICVIGPAVFAGYYNNPEANAKAFRDGWFRTGDLGHLDA----RGFLYITGRASDMYISGGSNVYPREIEEKL 436 (528)
T ss_pred CCCCCceEEEEeCCccchhhcCCHHHHHhhhcCCcEecceeEEEcc----CCeEEEeCCccceEEeCCEEECHHHHHHHH
Confidence 55788999999765 34332 99999988763 346899999999999999999999999999
Q ss_pred HH
Q 044130 425 TI 426 (565)
Q Consensus 425 ~~ 426 (565)
..
T Consensus 437 ~~ 438 (528)
T PRK07470 437 LT 438 (528)
T ss_pred Hh
Confidence 75
No 61
>PRK12492 long-chain-fatty-acid--CoA ligase; Provisional
Probab=97.73 E-value=0.00026 Score=79.23 Aligned_cols=128 Identities=14% Similarity=0.217 Sum_probs=81.7
Q ss_pred EEEEEecch---hhhHHHHHHhcCCCCceeccccccccee-eee-cCCC-CCCCCCceeeecCCceeEEeeeCCCCCCcc
Q 044130 266 IEAVVTGSM---AQYIPSLEYYSAGKLPLVGTMYASSECY-FGV-NLKP-LSNPADVSFTLLPNMCYFEFLPLGGENGTL 339 (565)
Q Consensus 266 i~~~~~G~~---~~y~~~l~~~~g~~~~~~~~~y~aSEg~-~gi-~~~~-~~~~~~~~~~l~p~~~ffEFip~~~~~~~~ 339 (565)
+..+.+||. ...+..+++.+| ++++ .+||+||+. ++. +... ...+...+.. +|+.. ++.++.+
T Consensus 335 lr~~~~gG~~~~~~~~~~~~~~~~--~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~G~p-~~~~~-v~ivd~~------ 403 (562)
T PRK12492 335 LKLTNSGGTALVKATAERWEQLTG--CTIV-EGYGLTETSPVASTNPYGELARLGTVGIP-VPGTA-LKVIDDD------ 403 (562)
T ss_pred eeEEEeccccCCHHHHHHHHHHhC--Ccee-eccCccccCceeeecCCcccccCCcccee-cCCCE-EEEECCC------
Confidence 556666662 244456666665 7888 899999974 221 1110 0011122322 23322 3334321
Q ss_pred ccccccccccCCCCceeeccCcccCCeEEEEeccc---ccee--------------eeecCCEEEEeeeeCCCCEEEEEe
Q 044130 340 LSMEFNEEEEVPNDKLVDLGHVRVGHYYELVVTTF---AGLN--------------RYRIGDVLQVTGFYNRAPQFRFIC 402 (565)
Q Consensus 340 ~~~~~~~~~~~~~~~~v~l~eve~G~~YelViTt~---~GLy--------------RYriGDvV~v~gf~~~~P~i~F~g 402 (565)
..+ +..|+..||+|++. .|.| .|++||++++.. + -.+.|+|
T Consensus 404 -------------~~~-----~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~~~~~g~~~TGD~g~~~~--~--G~l~i~G 461 (562)
T PRK12492 404 -------------GNE-----LPLGERGELCIKGPQVMKGYWQQPEATAEALDAEGWFKTGDIAVIDP--D--GFVRIVD 461 (562)
T ss_pred -------------CCC-----CCCCCceEEEEeCCccccccccCchhhhhcccCCCceecCcEEEECC--C--CeEEEec
Confidence 122 44788999999864 2333 399999999874 2 3689999
Q ss_pred ecCceeeeeecccCHHHHHHHHHH
Q 044130 403 RRNVVLSIDNDKTNEEDLHKSVTI 426 (565)
Q Consensus 403 R~~~~l~i~GEkl~e~~v~~av~~ 426 (565)
|.++++.+.|+++...+|+.++.+
T Consensus 462 R~~~~i~~~G~~i~~~eIE~~l~~ 485 (562)
T PRK12492 462 RKKDLIIVSGFNVYPNEIEDVVMA 485 (562)
T ss_pred ccCCeEEECCEEECHHHHHHHHHh
Confidence 999999999999999999999865
No 62
>PLN02614 long-chain acyl-CoA synthetase
Probab=97.73 E-value=0.00014 Score=83.77 Aligned_cols=132 Identities=15% Similarity=0.178 Sum_probs=81.4
Q ss_pred EEEEEecch--hhhHHHHHHhcCCCCceecccccccceeeeecCC-CC--CCCCCceeeecCCceeEEeeeCCCCCCccc
Q 044130 266 IEAVVTGSM--AQYIPSLEYYSAGKLPLVGTMYASSECYFGVNLK-PL--SNPADVSFTLLPNMCYFEFLPLGGENGTLL 340 (565)
Q Consensus 266 i~~~~~G~~--~~y~~~l~~~~g~~~~~~~~~y~aSEg~~gi~~~-~~--~~~~~~~~~l~p~~~ffEFip~~~~~~~~~ 340 (565)
+..+.+||. .+-..++.+.+++ ++++ .+||.||+..+.-.. +. ..++..|- .+|+.. .-.+++++.+
T Consensus 388 lr~~~~Gga~l~~~~~~~~~~~~~-~~i~-~~YG~TE~~~~~~~~~~~~~~~~gsvG~-p~pg~e-vki~d~~~~~---- 459 (666)
T PLN02614 388 VRIILSGAAPLASHVESFLRVVAC-CHVL-QGYGLTESCAGTFVSLPDELDMLGTVGP-PVPNVD-IRLESVPEME---- 459 (666)
T ss_pred EEEEEEcCCCCCHHHHHHHHHhcC-CCEE-eeCchHhhhhheeeeccccCCcCCcccC-cCCceE-EEEeeecccC----
Confidence 455566763 3334555555666 8888 999999974321111 11 01122232 123221 2223322110
Q ss_pred cccccccccCCCCceeeccCcccCCeEEEEeccc---ccee-------------eeecCCEEEEeeeeCCCCEEEEEeec
Q 044130 341 SMEFNEEEEVPNDKLVDLGHVRVGHYYELVVTTF---AGLN-------------RYRIGDVLQVTGFYNRAPQFRFICRR 404 (565)
Q Consensus 341 ~~~~~~~~~~~~~~~v~l~eve~G~~YelViTt~---~GLy-------------RYriGDvV~v~gf~~~~P~i~F~gR~ 404 (565)
.. ++..|+.+||+|... .|.| -|+|||++++.. ++ .+.|+||.
T Consensus 460 ------------~~-----~~~~g~~GEl~vrGp~v~~GY~~~pe~T~~~f~dGw~~TGDlg~~d~--dG--~l~i~gR~ 518 (666)
T PLN02614 460 ------------YD-----ALASTPRGEICIRGKTLFSGYYKREDLTKEVLIDGWLHTGDVGEWQP--NG--SMKIIDRK 518 (666)
T ss_pred ------------cc-----cCCCCCCceEEEcCCcccccccCCHHHhhhhhccCCcccceEEEEcC--CC--CEEEEEcc
Confidence 11 245788899999654 4555 389999999874 22 58999999
Q ss_pred Cceeee-eecccCHHHHHHHHHH
Q 044130 405 NVVLSI-DNDKTNEEDLHKSVTI 426 (565)
Q Consensus 405 ~~~l~i-~GEkl~e~~v~~av~~ 426 (565)
++++.+ .||++++.+|+.++.+
T Consensus 519 kd~ik~~~G~~V~p~eIE~~l~~ 541 (666)
T PLN02614 519 KNIFKLSQGEYVAVENIENIYGE 541 (666)
T ss_pred hhceecCCCeeecHHHHHHHHhc
Confidence 999997 5999999999999865
No 63
>PRK13391 acyl-CoA synthetase; Provisional
Probab=97.73 E-value=0.0011 Score=73.00 Aligned_cols=127 Identities=10% Similarity=0.030 Sum_probs=80.7
Q ss_pred EEEEEecch---hhhHHHHHHhcCCCCceecccccccceeeeecCCCC---CCCCCceeeecCCceeEEeeeCCCCCCcc
Q 044130 266 IEAVVTGSM---AQYIPSLEYYSAGKLPLVGTMYASSECYFGVNLKPL---SNPADVSFTLLPNMCYFEFLPLGGENGTL 339 (565)
Q Consensus 266 i~~~~~G~~---~~y~~~l~~~~g~~~~~~~~~y~aSEg~~gi~~~~~---~~~~~~~~~l~p~~~ffEFip~~~~~~~~ 339 (565)
+.++++||. ....+.+++.+| .+++ ..||+||+....-.... ..++..+.. .++ ..+.++.+
T Consensus 277 l~~~~~gg~~~~~~~~~~~~~~~g--~~v~-~~YG~tE~~~~~~~~~~~~~~~~~~vG~~-~~g--~~~i~d~~------ 344 (511)
T PRK13391 277 LEVAIHAAAPCPPQVKEQMIDWWG--PIIH-EYYAATEGLGFTACDSEEWLAHPGTVGRA-MFG--DLHILDDD------ 344 (511)
T ss_pred eeEEEEccCCCCHHHHHHHHHHcC--Ccee-eeeccccccceEEecCccccccCCCcCCc-ccc--eEEEECCC------
Confidence 566677662 345677777776 5666 99999998531111111 011122221 122 23444322
Q ss_pred ccccccccccCCCCceeeccCcccCCeEEEEeccc--ccee---------------eeecCCEEEEeeeeCCCCEEEEEe
Q 044130 340 LSMEFNEEEEVPNDKLVDLGHVRVGHYYELVVTTF--AGLN---------------RYRIGDVLQVTGFYNRAPQFRFIC 402 (565)
Q Consensus 340 ~~~~~~~~~~~~~~~~v~l~eve~G~~YelViTt~--~GLy---------------RYriGDvV~v~gf~~~~P~i~F~g 402 (565)
.+ .+..|+..||++... -|.| -|++||+.+... .-.+.|+|
T Consensus 345 -------------~~-----~~~~g~~Gel~~~g~~~~gy~~~~~~~~~~~~~~~~w~~TGD~g~~~~----~g~l~~~g 402 (511)
T PRK13391 345 -------------GA-----ELPPGEPGTIWFEGGRPFEYLNDPAKTAEARHPDGTWSTVGDIGYVDE----DGYLYLTD 402 (511)
T ss_pred -------------CC-----CCCCCCceEEEEecCcceEEcCChhHhHHhhccCCCEEecCCEEEECC----CccEEEec
Confidence 11 134788889988774 2222 377999887753 34689999
Q ss_pred ecCceeeeeecccCHHHHHHHHHH
Q 044130 403 RRNVVLSIDNDKTNEEDLHKSVTI 426 (565)
Q Consensus 403 R~~~~l~i~GEkl~e~~v~~av~~ 426 (565)
|.++++.+.|+++...+|+.++..
T Consensus 403 R~~~~i~~~G~~v~~~eie~~l~~ 426 (511)
T PRK13391 403 RAAFMIISGGVNIYPQEAENLLIT 426 (511)
T ss_pred cCCCEEEeCCEEECHHHHHHHHHh
Confidence 999999999999999999999975
No 64
>PLN03051 acyl-activating enzyme; Provisional
Probab=97.72 E-value=0.00029 Score=77.85 Aligned_cols=44 Identities=18% Similarity=0.252 Sum_probs=39.0
Q ss_pred eeecCCEEEEeeeeCCCCEEEEEeecCceeeeeecccCHHHHHHHHHH
Q 044130 379 RYRIGDVLQVTGFYNRAPQFRFICRRNVVLSIDNDKTNEEDLHKSVTI 426 (565)
Q Consensus 379 RYriGDvV~v~gf~~~~P~i~F~gR~~~~l~i~GEkl~e~~v~~av~~ 426 (565)
.|++||++++.. + -.+.|+||.++++.+.|++++..+|+++|.+
T Consensus 358 ~~~TGDlg~~d~--d--G~l~~~gR~~d~ik~~G~~v~p~EIE~~l~~ 401 (499)
T PLN03051 358 LRRHGDIMKRTP--G--GYFCVQGRADDTMNLGGIKTSSVEIERACDR 401 (499)
T ss_pred eeecCCeEEECC--C--CcEEEEeccCCEEeeCCEECCHHHHHHHHHh
Confidence 489999998863 2 3689999999999999999999999999975
No 65
>PLN02860 o-succinylbenzoate-CoA ligase
Probab=97.70 E-value=0.00032 Score=78.66 Aligned_cols=60 Identities=13% Similarity=0.147 Sum_probs=49.6
Q ss_pred cCCeEEEEecccc---cee--------------eeecCCEEEEeeeeCCCCEEEEEeecCceeeeeecccCHHHHHHHHH
Q 044130 363 VGHYYELVVTTFA---GLN--------------RYRIGDVLQVTGFYNRAPQFRFICRRNVVLSIDNDKTNEEDLHKSVT 425 (565)
Q Consensus 363 ~G~~YelViTt~~---GLy--------------RYriGDvV~v~gf~~~~P~i~F~gR~~~~l~i~GEkl~e~~v~~av~ 425 (565)
.|+..||+|.... |.| -|++||+.++.. .-.+.|+||.++++++.|++++..+|+.++.
T Consensus 382 ~g~~Gel~v~g~~~~~GY~~~~~~t~~~~~~~g~~~TGDl~~~d~----dG~l~~~GR~~d~i~~~G~~v~p~eIE~~l~ 457 (563)
T PLN02860 382 SSRVGRILTRGPHVMLGYWGQNSETASVLSNDGWLDTGDIGWIDK----AGNLWLIGRSNDRIKTGGENVYPEEVEAVLS 457 (563)
T ss_pred CCceeEEEEecCcccccccCCccccchhccCCCeEEccceEEEcC----CCCEEEeecccceeEECCEEccHHHHHHHHH
Confidence 6889999997753 332 379999999853 2368899999999999999999999999987
Q ss_pred H
Q 044130 426 I 426 (565)
Q Consensus 426 ~ 426 (565)
.
T Consensus 458 ~ 458 (563)
T PLN02860 458 Q 458 (563)
T ss_pred h
Confidence 5
No 66
>PRK13388 acyl-CoA synthetase; Provisional
Probab=97.69 E-value=0.00029 Score=78.64 Aligned_cols=130 Identities=16% Similarity=0.110 Sum_probs=78.3
Q ss_pred hhHHHHHHhcCCCCceecccccccceeeeecCCCCCCCCCceeeecCCceeEEeeeCCCCCCccccccccccccCCCCce
Q 044130 276 QYIPSLEYYSAGKLPLVGTMYASSECYFGVNLKPLSNPADVSFTLLPNMCYFEFLPLGGENGTLLSMEFNEEEEVPNDKL 355 (565)
Q Consensus 276 ~y~~~l~~~~g~~~~~~~~~y~aSEg~~gi~~~~~~~~~~~~~~l~p~~~ffEFip~~~~~~~~~~~~~~~~~~~~~~~~ 355 (565)
....++.+.++ ++++ ..||+||+...+-..+..+++..+..+ |+ .+++..+......+ ..-+++...
T Consensus 278 ~~~~~~~~~~~--~~l~-~~YG~tE~~~~~~~~~~~~~~~vG~p~-~g---~~i~~~~~~~~~~~------~~~d~~g~~ 344 (540)
T PRK13388 278 RDIAEFSRRFG--CQVE-DGYGSSEGAVIVVREPGTPPGSIGRGA-PG---VAIYNPETLTECAV------ARFDAHGAL 344 (540)
T ss_pred HHHHHHHHHhC--Ccee-cccccccccceeecCCCCCCCCCCCCC-CC---cEEEcCCCCccccc------eeccCcccc
Confidence 34566666665 7788 999999985332222222333444433 44 34443322110000 000001111
Q ss_pred eeccCcccCCeEEEEec-cc---ccee-------------eeecCCEEEEeeeeCCCCEEEEEeecCceeeeeecccCHH
Q 044130 356 VDLGHVRVGHYYELVVT-TF---AGLN-------------RYRIGDVLQVTGFYNRAPQFRFICRRNVVLSIDNDKTNEE 418 (565)
Q Consensus 356 v~l~eve~G~~YelViT-t~---~GLy-------------RYriGDvV~v~gf~~~~P~i~F~gR~~~~l~i~GEkl~e~ 418 (565)
+ ...|+.+||+++ .. .|+| .|++||+.+... . -.+.|+||.++++++.|++++..
T Consensus 345 ~----~~~~~~GEl~v~~g~~~~~gY~~~~~~t~~~~~~g~~~TGD~~~~~~--d--g~l~i~GR~~d~i~~~G~~v~p~ 416 (540)
T PRK13388 345 L----NADEAIGELVNTAGAGFFEGYYNNPEATAERMRHGMYWSGDLAYRDA--D--GWIYFAGRTADWMRVDGENLSAA 416 (540)
T ss_pred c----cCCCcceEEEEecCCcccccccCChHHHHHHhhcCceeccceEEEcC--C--CcEEEeccCCceEEECCEEeCHH
Confidence 1 124678999997 32 2444 499999998864 2 36889999999999999999999
Q ss_pred HHHHHHHH
Q 044130 419 DLHKSVTI 426 (565)
Q Consensus 419 ~v~~av~~ 426 (565)
+|+.++.+
T Consensus 417 eIE~~l~~ 424 (540)
T PRK13388 417 PIERILLR 424 (540)
T ss_pred HHHHHHHh
Confidence 99999865
No 67
>PRK08315 AMP-binding domain protein; Validated
Probab=97.69 E-value=0.0019 Score=71.94 Aligned_cols=130 Identities=10% Similarity=0.072 Sum_probs=82.2
Q ss_pred EEEEEecch---hhhHHHHHHhcCCCCceecccccccceeeeecCCCCC-----CCCCceeeecCCceeEEeeeCCCCCC
Q 044130 266 IEAVVTGSM---AQYIPSLEYYSAGKLPLVGTMYASSECYFGVNLKPLS-----NPADVSFTLLPNMCYFEFLPLGGENG 337 (565)
Q Consensus 266 i~~~~~G~~---~~y~~~l~~~~g~~~~~~~~~y~aSEg~~gi~~~~~~-----~~~~~~~~l~p~~~ffEFip~~~~~~ 337 (565)
+.+++.||. ..-+.++++.++. .+++ ..||.||+.......... .+...+. .+|+ .-++.++.++
T Consensus 317 lr~~~~~G~~~~~~~~~~~~~~~~~-~~l~-~~YG~tE~~~~~~~~~~~~~~~~~~~~vG~-p~~~-~~v~i~d~~~--- 389 (559)
T PRK08315 317 LRTGIMAGSPCPIEVMKRVIDKMHM-SEVT-IAYGMTETSPVSTQTRTDDPLEKRVTTVGR-ALPH-LEVKIVDPET--- 389 (559)
T ss_pred hheeEecCCCCCHHHHHHHHHHcCC-ccee-EEEcccccccceeecCcccchhhccCCCCc-cCCC-cEEEEEcCcc---
Confidence 555555652 3445667777775 5577 899999985322111100 0112222 1233 2344444331
Q ss_pred ccccccccccccCCCCceeeccCcccCCeEEEEecccc---cee--------------eeecCCEEEEeeeeCCCCEEEE
Q 044130 338 TLLSMEFNEEEEVPNDKLVDLGHVRVGHYYELVVTTFA---GLN--------------RYRIGDVLQVTGFYNRAPQFRF 400 (565)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~v~l~eve~G~~YelViTt~~---GLy--------------RYriGDvV~v~gf~~~~P~i~F 400 (565)
.++ +..|+..||+|...+ |.| .|++||+++... .-.+.|
T Consensus 390 ---------------~~~-----~~~g~~GEl~v~g~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~----dg~~~~ 445 (559)
T PRK08315 390 ---------------GET-----VPRGEQGELCTRGYSVMKGYWNDPEKTAEAIDADGWMHTGDLAVMDE----EGYVNI 445 (559)
T ss_pred ---------------CCc-----CCCCCceEEEEECchhhhhhcCChhHHhhcCCCCCCEEccceEEEcC----CceEEE
Confidence 112 447889999997642 222 499999998753 226899
Q ss_pred EeecCceeeeeecccCHHHHHHHHHH
Q 044130 401 ICRRNVVLSIDNDKTNEEDLHKSVTI 426 (565)
Q Consensus 401 ~gR~~~~l~i~GEkl~e~~v~~av~~ 426 (565)
+||.++++.+.|+++...+|+.++..
T Consensus 446 ~GR~d~~i~~~G~~v~~~eIE~~l~~ 471 (559)
T PRK08315 446 VGRIKDMIIRGGENIYPREIEEFLYT 471 (559)
T ss_pred EeeccceEEECCEEEcHHHHHHHHHh
Confidence 99999999999999999999999975
No 68
>TIGR03098 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosortase system type 1 associated. This group of proteins contains an AMP-binding domain (pfam00501) associated with acyl CoA-ligases. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present next to a decarboxylase enzyme. A number of sequences from Burkholderia species also hit this model, but the genomic context is obviously different. The hypothesis of a constant substrate for this family is only strong where the exosortase context is present.
Probab=97.67 E-value=0.0026 Score=69.86 Aligned_cols=129 Identities=16% Similarity=0.217 Sum_probs=81.0
Q ss_pred EEEEEecc---hhhhHHHHHHhcCCCCceecccccccceeeeecCCCCC---CCCCceeeecCCceeEEeeeCCCCCCcc
Q 044130 266 IEAVVTGS---MAQYIPSLEYYSAGKLPLVGTMYASSECYFGVNLKPLS---NPADVSFTLLPNMCYFEFLPLGGENGTL 339 (565)
Q Consensus 266 i~~~~~G~---~~~y~~~l~~~~g~~~~~~~~~y~aSEg~~gi~~~~~~---~~~~~~~~l~p~~~ffEFip~~~~~~~~ 339 (565)
+..+.+|| ...-...+++.+++ ++++ ..||.||+.......+.. .++..+- .+|+ .....++.+
T Consensus 276 l~~~~~~g~~l~~~~~~~~~~~~~~-~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~vG~-~~~~-~~~~i~~~~------ 345 (515)
T TIGR03098 276 LRYLTNSGGAMPRATLSRLRSFLPN-ARLF-LMYGLTEAFRSTYLPPEEVDRRPDSIGK-AIPN-AEVLVLRED------ 345 (515)
T ss_pred eEEEEecCCcCCHHHHHHHHHHCCC-CeEe-eeeccccccceEecccccccCCCCCcce-ecCC-CEEEEECCC------
Confidence 55666665 23455677777766 7888 999999984322122110 0111221 2222 223344321
Q ss_pred ccccccccccCCCCceeeccCcccCCeEEEEeccc---ccee-------------------------eeecCCEEEEeee
Q 044130 340 LSMEFNEEEEVPNDKLVDLGHVRVGHYYELVVTTF---AGLN-------------------------RYRIGDVLQVTGF 391 (565)
Q Consensus 340 ~~~~~~~~~~~~~~~~v~l~eve~G~~YelViTt~---~GLy-------------------------RYriGDvV~v~gf 391 (565)
.+. +..|+.+|+++.+. .|.| .|++||++++..
T Consensus 346 -------------~~~-----~~~~~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~- 406 (515)
T TIGR03098 346 -------------GSE-----CAPGEEGELVHRGALVAMGYWNDPEKTAERFRPLPPRPGELHLPELAVWSGDTVRRDE- 406 (515)
T ss_pred -------------CCC-----CCCCCceEEEEcCchhhccccCCchhhhhhhhccCCccccccccccceeccceEEEcC-
Confidence 112 34677788888653 3332 378999998753
Q ss_pred eCCCCEEEEEeecCceeeeeecccCHHHHHHHHHH
Q 044130 392 YNRAPQFRFICRRNVVLSIDNDKTNEEDLHKSVTI 426 (565)
Q Consensus 392 ~~~~P~i~F~gR~~~~l~i~GEkl~e~~v~~av~~ 426 (565)
+ -.+.|.||.++++++.|++++..+|++++..
T Consensus 407 -~--g~l~~~GR~~d~i~~~G~~v~~~eiE~~l~~ 438 (515)
T TIGR03098 407 -E--GFLYFVGRRDEMIKTSGYRVSPTEVEEVAYA 438 (515)
T ss_pred -C--ceEEEEeccccceecCCEEeCHHHHHHHHhc
Confidence 2 2678999999999999999999999999965
No 69
>PRK05850 acyl-CoA synthetase; Validated
Probab=97.65 E-value=0.0023 Score=71.85 Aligned_cols=63 Identities=19% Similarity=0.241 Sum_probs=52.2
Q ss_pred CcccCCeEEEEeccc---ccee-------------------------eeecCCEEEEeeeeCCCCEEEEEeecCceeeee
Q 044130 360 HVRVGHYYELVVTTF---AGLN-------------------------RYRIGDVLQVTGFYNRAPQFRFICRRNVVLSID 411 (565)
Q Consensus 360 eve~G~~YelViTt~---~GLy-------------------------RYriGDvV~v~gf~~~~P~i~F~gR~~~~l~i~ 411 (565)
++..|+.+||.|... .|.| -|++||+.++. ++ .+.|+||.++++++.
T Consensus 391 ~~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~f~~~~~~~~~~~~~~~w~~TGDl~~~~---~G--~l~~~GR~~d~i~~~ 465 (578)
T PRK05850 391 ECPAGTVGEIWVHGDNVAAGYWQKPEETERTFGATLVDPSPGTPEGPWLRTGDLGFIS---EG--ELFIVGRIKDLLIVD 465 (578)
T ss_pred CCCCCCEEEEEEecCcccccccCChhhhHHHhhcccccccccCCCCCeeeccceeeEE---CC--EEEEEcccccEEEEC
Confidence 467899999999764 2333 48999998763 23 789999999999999
Q ss_pred ecccCHHHHHHHHHHH
Q 044130 412 NDKTNEEDLHKSVTIA 427 (565)
Q Consensus 412 GEkl~e~~v~~av~~~ 427 (565)
|++++..+|+.++.+.
T Consensus 466 G~~i~p~eIE~~l~~~ 481 (578)
T PRK05850 466 GRNHYPDDIEATIQEI 481 (578)
T ss_pred CeecCHHHHHHHHHHh
Confidence 9999999999999764
No 70
>PRK07445 O-succinylbenzoic acid--CoA ligase; Reviewed
Probab=97.64 E-value=0.00017 Score=78.96 Aligned_cols=60 Identities=5% Similarity=0.136 Sum_probs=48.6
Q ss_pred cCCeEEEEeccc---cceee--------eecCCEEEEeeeeCCCCEEEEEeecCceeeeeecccCHHHHHHHHHH
Q 044130 363 VGHYYELVVTTF---AGLNR--------YRIGDVLQVTGFYNRAPQFRFICRRNVVLSIDNDKTNEEDLHKSVTI 426 (565)
Q Consensus 363 ~G~~YelViTt~---~GLyR--------YriGDvV~v~gf~~~~P~i~F~gR~~~~l~i~GEkl~e~~v~~av~~ 426 (565)
.|+.+||+|... .|.|. |++||++++.. --.+.|+||.++++.+.|+|+++.+|+.++.+
T Consensus 298 ~g~~Gel~v~g~~~~~gY~~~~~~~~g~~~TGDl~~~d~----dG~l~~~GR~dd~I~~~G~~V~p~eIE~~l~~ 368 (452)
T PRK07445 298 ANQTGNITIQAQSLALGYYPQILDSQGIFETDDLGYLDA----QGYLHILGRNSQKIITGGENVYPAEVEAAILA 368 (452)
T ss_pred CCCcceEEEeCCccchhhcCCccCCCCEEECCCEEEEcC----CCCEEEEeecCCEEEECCEEECHHHHHHHHHh
Confidence 488899998543 33331 89999998742 23688999999999999999999999999976
No 71
>PRK10946 entE enterobactin synthase subunit E; Provisional
Probab=97.64 E-value=0.00033 Score=77.93 Aligned_cols=132 Identities=11% Similarity=0.104 Sum_probs=82.7
Q ss_pred CCCCceEEEEEecch---hhhHHHHHHhcCCCCceecccccccceeeeec-CCCC--CCCCCceeeecCCceeEEeeeCC
Q 044130 260 WPRAKYIEAVVTGSM---AQYIPSLEYYSAGKLPLVGTMYASSECYFGVN-LKPL--SNPADVSFTLLPNMCYFEFLPLG 333 (565)
Q Consensus 260 WP~l~~i~~~~~G~~---~~y~~~l~~~~g~~~~~~~~~y~aSEg~~gi~-~~~~--~~~~~~~~~l~p~~~ffEFip~~ 333 (565)
.++ +.++.+||. .....++.+.+| ++++ ..||.||+.+... .+.. ......+..+.|+. ..+.++.+
T Consensus 299 ~~~---l~~v~~gg~~l~~~~~~~~~~~~g--~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~G~p~~~~~-~v~i~d~~ 371 (536)
T PRK10946 299 LAS---LKLLQVGGARLSETLARRIPAELG--CQLQ-QVFGMAEGLVNYTRLDDSDERIFTTQGRPMSPDD-EVWVADAD 371 (536)
T ss_pred ccc---eeEEEECCCCCCHHHHHHHHHhcC--CeEE-EeecccccceeeecCCCccccccccCCcccCCCc-eEEEECCC
Confidence 356 666777773 234455666665 7888 9999999865421 1100 00011122221211 11222111
Q ss_pred CCCCccccccccccccCCCCceeeccCcccCCeEEEEeccc---ccee--------------eeecCCEEEEeeeeCCCC
Q 044130 334 GENGTLLSMEFNEEEEVPNDKLVDLGHVRVGHYYELVVTTF---AGLN--------------RYRIGDVLQVTGFYNRAP 396 (565)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~v~l~eve~G~~YelViTt~---~GLy--------------RYriGDvV~v~gf~~~~P 396 (565)
. ..+..|+..||+|+.. .|.| -|++||+.+... ++
T Consensus 372 -------------------~-----~~~~~g~~Gel~v~g~~~~~GY~~~~~~t~~~~~~d~~~~TGDl~~~d~--~G-- 423 (536)
T PRK10946 372 -------------------G-----NPLPQGEVGRLMTRGPYTFRGYYKSPQHNASAFDANGFYCSGDLVSIDP--DG-- 423 (536)
T ss_pred -------------------C-----CCCCCCCccEEEEecCccchhhcCCcccchhhcccCCceecCceEEECC--CC--
Confidence 1 2245899999999753 3333 389999998874 22
Q ss_pred EEEEEeecCceeeeeecccCHHHHHHHHHH
Q 044130 397 QFRFICRRNVVLSIDNDKTNEEDLHKSVTI 426 (565)
Q Consensus 397 ~i~F~gR~~~~l~i~GEkl~e~~v~~av~~ 426 (565)
.+.|+||.++++.+.|++++..+|+.+|..
T Consensus 424 ~l~~~gR~~d~i~~~G~~v~~~eiE~~l~~ 453 (536)
T PRK10946 424 YITVVGREKDQINRGGEKIAAEEIENLLLR 453 (536)
T ss_pred cEEEeccccceeecCCEEEcHHHHHHHHHh
Confidence 588999999999999999999999999975
No 72
>PRK07868 acyl-CoA synthetase; Validated
Probab=97.62 E-value=0.0013 Score=79.17 Aligned_cols=142 Identities=13% Similarity=0.115 Sum_probs=85.0
Q ss_pred EEEEEecchh-hhHHHHHHhcCCCCceecccccccceeeee-cCCCCCCCCCceeeecCCceeEEeeeCCCCCCcccccc
Q 044130 266 IEAVVTGSMA-QYIPSLEYYSAGKLPLVGTMYASSECYFGV-NLKPLSNPADVSFTLLPNMCYFEFLPLGGENGTLLSME 343 (565)
Q Consensus 266 i~~~~~G~~~-~y~~~l~~~~g~~~~~~~~~y~aSEg~~gi-~~~~~~~~~~~~~~l~p~~~ffEFip~~~~~~~~~~~~ 343 (565)
+..+++|++. ...+++++.+++ ++++ ..||.||+.+.+ +.. ...++..|.. +|+..-++..+.+....+.+
T Consensus 722 lr~~~g~gl~~~l~~~~~~~~~~-~~l~-~~YG~TE~~~~~~~~~-~~~~~svG~p-~pg~~~v~i~~~d~~~g~li--- 794 (994)
T PRK07868 722 VRLFIGSGMPTGLWERVVEAFAP-AHVV-EFFATTDGQAVLANVS-GAKIGSKGRP-LPGAGRVELAAYDPEHDLIL--- 794 (994)
T ss_pred eEEEecCCCCHHHHHHHHHHhCc-hhee-eeeecccccccccccC-CCCCcccCCc-cCCCCceeEEEecCcCCcee---
Confidence 4445556554 456777777876 8888 899999985422 111 1112223332 34332233322211000000
Q ss_pred ccccccCCCCceeeccCcccCCeEEEEeccc----------ccee-----eeecCCEEEEeeeeCCCCEEEEEeecCcee
Q 044130 344 FNEEEEVPNDKLVDLGHVRVGHYYELVVTTF----------AGLN-----RYRIGDVLQVTGFYNRAPQFRFICRRNVVL 408 (565)
Q Consensus 344 ~~~~~~~~~~~~v~l~eve~G~~YelViTt~----------~GLy-----RYriGDvV~v~gf~~~~P~i~F~gR~~~~l 408 (565)
. .+++ -+.+++.|+..||.+... .|.+ -|++||+.++.. --.+.|+||.++++
T Consensus 795 ----~-d~~G---~~~~~~~ge~Gel~~~~~~~~~p~~t~~~~~~~~~dgw~~TGDlg~~d~----dG~l~~~GR~dd~I 862 (994)
T PRK07868 795 ----E-DDRG---FVRRAEVNEVGVLLARARGPIDPTASVKRGVFAPADTWISTEYLFRRDD----DGDYWLVDRRGSVI 862 (994)
T ss_pred ----e-cCCc---eEEEcCCCCceEEEEecCCCCChhhhhHhcccccCCEEEeccceEEEcC----CCCEEEeccCCCEE
Confidence 0 0001 012366899999998642 2223 278999998763 23589999999999
Q ss_pred eeeecccCHHHHHHHHHH
Q 044130 409 SIDNDKTNEEDLHKSVTI 426 (565)
Q Consensus 409 ~i~GEkl~e~~v~~av~~ 426 (565)
++.|++++..+|+.++.+
T Consensus 863 k~~G~~I~p~EIE~~L~~ 880 (994)
T PRK07868 863 RTARGPVYTEPVTDALGR 880 (994)
T ss_pred EeCCceEcHHHHHHHHhc
Confidence 999999999999999976
No 73
>PLN02736 long-chain acyl-CoA synthetase
Probab=97.61 E-value=0.00031 Score=80.38 Aligned_cols=132 Identities=11% Similarity=0.072 Sum_probs=80.2
Q ss_pred EEEEEecchh---hhHHHHHHhcCCCCceecccccccceeeeecCCC--CCCCCCceeeecCCceeEEeeeCCCCCCccc
Q 044130 266 IEAVVTGSMA---QYIPSLEYYSAGKLPLVGTMYASSECYFGVNLKP--LSNPADVSFTLLPNMCYFEFLPLGGENGTLL 340 (565)
Q Consensus 266 i~~~~~G~~~---~y~~~l~~~~g~~~~~~~~~y~aSEg~~gi~~~~--~~~~~~~~~~l~p~~~ffEFip~~~~~~~~~ 340 (565)
+..+++||.. .....+++.+| ++++ .+||.||+...+.... ...++..|. .+|+. =...++.++.+
T Consensus 378 lr~~~~gGa~l~~~~~~~~~~~~g--~~~~-~~YG~TE~~~~~~~~~~~~~~~~~vG~-p~pg~-~v~i~d~~~~~---- 448 (651)
T PLN02736 378 VRFMSSGASPLSPDVMEFLRICFG--GRVL-EGYGMTETSCVISGMDEGDNLSGHVGS-PNPAC-EVKLVDVPEMN---- 448 (651)
T ss_pred EEEEEeCCCCCCHHHHHHHHHHhC--CCeE-EEechHHhchheeccCCCCCCCCccCC-ccCce-EEEEEEccccC----
Confidence 6666777732 34455655666 6777 9999999854322211 111112222 22332 23445432210
Q ss_pred cccccccccCCCCceeeccCcccCCeEEEEeccc---ccee--------------eeecCCEEEEeeeeCCCCEEEEEee
Q 044130 341 SMEFNEEEEVPNDKLVDLGHVRVGHYYELVVTTF---AGLN--------------RYRIGDVLQVTGFYNRAPQFRFICR 403 (565)
Q Consensus 341 ~~~~~~~~~~~~~~~v~l~eve~G~~YelViTt~---~GLy--------------RYriGDvV~v~gf~~~~P~i~F~gR 403 (565)
...+.+++...||.|... .|.| -|+|||+.++.. ++ .+.|+||
T Consensus 449 ----------------~~~~~~~~~~GEl~vrgp~v~~GY~~~~~~t~~~~~~dgw~~TGDlg~~d~--dG--~l~i~GR 508 (651)
T PLN02736 449 ----------------YTSEDQPYPRGEICVRGPIIFKGYYKDEVQTREVIDEDGWLHTGDIGLWLP--GG--RLKIIDR 508 (651)
T ss_pred ----------------cccCCCCCCCceEEecCCccccccccCHHHHHhhhccCCCeeccceEEEcC--CC--cEEEEEe
Confidence 001123344568888653 3433 388999999874 23 6899999
Q ss_pred cCceeee-eecccCHHHHHHHHHH
Q 044130 404 RNVVLSI-DNDKTNEEDLHKSVTI 426 (565)
Q Consensus 404 ~~~~l~i-~GEkl~e~~v~~av~~ 426 (565)
.++++.+ .|+++++.+|+.++..
T Consensus 509 ~kd~ik~~~G~~V~p~eIE~~l~~ 532 (651)
T PLN02736 509 KKNIFKLAQGEYIAPEKIENVYAK 532 (651)
T ss_pred chhheEcCCCcEechHHHHHHHhc
Confidence 9999998 5999999999999965
No 74
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=97.59 E-value=0.00044 Score=85.02 Aligned_cols=63 Identities=21% Similarity=0.322 Sum_probs=52.1
Q ss_pred cccCCeEEEEeccc---ccee--------------------eeecCCEEEEeeeeCCCCEEEEEeecCceeeeeecccCH
Q 044130 361 VRVGHYYELVVTTF---AGLN--------------------RYRIGDVLQVTGFYNRAPQFRFICRRNVVLSIDNDKTNE 417 (565)
Q Consensus 361 ve~G~~YelViTt~---~GLy--------------------RYriGDvV~v~gf~~~~P~i~F~gR~~~~l~i~GEkl~e 417 (565)
+..|..+||+|+.. .|.| -|++||++++.. + -.+.|+||.++++.++|+++..
T Consensus 797 ~~~g~~Gel~i~g~~~~~GY~~~~~~t~~~f~~~~~~~~~~~y~TGDl~~~~~--~--G~l~~~GR~d~~ik~~G~ri~~ 872 (1296)
T PRK10252 797 VPPGVAGDLYLTGIQLAQGYLGRPDLTASRFIADPFAPGERMYRTGDVARWLD--D--GAVEYLGRSDDQLKIRGQRIEL 872 (1296)
T ss_pred CCCCCceEEEecccccchhhCCCcccchhhcccCCCCCCCEEEecCceEEEcC--C--CcEEEecccCCeEEEeeEEecH
Confidence 45899999999874 2322 299999999874 2 3789999999999999999999
Q ss_pred HHHHHHHHHH
Q 044130 418 EDLHKSVTIA 427 (565)
Q Consensus 418 ~~v~~av~~~ 427 (565)
.+|+.+|.+.
T Consensus 873 ~eIE~~l~~~ 882 (1296)
T PRK10252 873 GEIDRAMQAL 882 (1296)
T ss_pred HHHHHHHHhC
Confidence 9999999763
No 75
>PRK08308 acyl-CoA synthetase; Validated
Probab=97.57 E-value=0.00024 Score=76.36 Aligned_cols=58 Identities=12% Similarity=0.053 Sum_probs=49.3
Q ss_pred cCCeEEEEeccccceeeeecCCEEEEeeeeCCCCEEEEEeecCceeeeeecccCHHHHHHHHHH
Q 044130 363 VGHYYELVVTTFAGLNRYRIGDVLQVTGFYNRAPQFRFICRRNVVLSIDNDKTNEEDLHKSVTI 426 (565)
Q Consensus 363 ~G~~YelViTt~~GLyRYriGDvV~v~gf~~~~P~i~F~gR~~~~l~i~GEkl~e~~v~~av~~ 426 (565)
.|+..|+++++..| +|++||+++... + -.+.|+||.++++.+.|++++..+|+.++.+
T Consensus 278 ~~~~gel~v~~~~~--~~~TGDl~~~~~--d--g~l~~~GR~~~~ik~~G~~v~p~eIE~~l~~ 335 (414)
T PRK08308 278 ENAPEEIVVKMGDK--EIFTKDLGYKSE--R--GTLHFMGRMDDVINVSGLNVYPIEVEDVMLR 335 (414)
T ss_pred CCCCceEEEEcCCc--eEECCceEEECC--C--ccEEEecccCCeEEECCEEECHHHHHHHHHh
Confidence 46678899988776 578999998763 2 3689999999999999999999999999975
No 76
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=97.57 E-value=0.00029 Score=87.44 Aligned_cols=44 Identities=14% Similarity=0.182 Sum_probs=39.2
Q ss_pred eeecCCEEEEeeeeCCCCEEEEEeecCceeeeeecccCHHHHHHHHHH
Q 044130 379 RYRIGDVLQVTGFYNRAPQFRFICRRNVVLSIDNDKTNEEDLHKSVTI 426 (565)
Q Consensus 379 RYriGDvV~v~gf~~~~P~i~F~gR~~~~l~i~GEkl~e~~v~~av~~ 426 (565)
-|+|||++++.. + -.+.|+||.++++.++|+++...+|+.++.+
T Consensus 679 ~y~TGDlg~~~~--d--G~l~~~GR~dd~Iki~G~rI~p~eIE~~l~~ 722 (1389)
T TIGR03443 679 LYRTGDLGRYLP--D--GNVECCGRADDQVKIRGFRIELGEIDTHLSQ 722 (1389)
T ss_pred eeecCCceeEcC--C--CCEEEecccCCEEEeCcEEecHHHHHHHHHh
Confidence 399999999864 2 3699999999999999999999999999976
No 77
>PRK07787 acyl-CoA synthetase; Validated
Probab=97.56 E-value=0.00073 Score=73.80 Aligned_cols=129 Identities=18% Similarity=0.198 Sum_probs=79.8
Q ss_pred EEEEEecch---hhhHHHHHHhcCCCCceecccccccceeeeecCCCCC--CCCCceeeecCCceeEEeeeCCCCCCccc
Q 044130 266 IEAVVTGSM---AQYIPSLEYYSAGKLPLVGTMYASSECYFGVNLKPLS--NPADVSFTLLPNMCYFEFLPLGGENGTLL 340 (565)
Q Consensus 266 i~~~~~G~~---~~y~~~l~~~~g~~~~~~~~~y~aSEg~~gi~~~~~~--~~~~~~~~l~p~~~ffEFip~~~~~~~~~ 340 (565)
+..+++||. ....+.+++.++ .+++ ..||.||+.+.+...... .+...+.. +|+. -...++.+
T Consensus 243 l~~~~~gg~~~~~~~~~~~~~~~~--~~~~-~~YG~tE~~~~~~~~~~~~~~~~~vG~~-~~g~-~~~i~d~~------- 310 (471)
T PRK07787 243 ARLLVSGSAALPVPVFDRLAALTG--HRPV-ERYGMTETLITLSTRADGERRPGWVGLP-LAGV-ETRLVDED------- 310 (471)
T ss_pred eeEEEECCCCCCHHHHHHHHHHcC--CCee-cccCccccCcceecCCCCcccCCccccc-CCCc-EEEEECCC-------
Confidence 566677762 345667777776 7788 999999986432111110 01112221 2222 22333322
Q ss_pred cccccccccCCCCceeeccCcccCC-eEEEEeccc---ccee--------------eeecCCEEEEeeeeCCCCEEEEEe
Q 044130 341 SMEFNEEEEVPNDKLVDLGHVRVGH-YYELVVTTF---AGLN--------------RYRIGDVLQVTGFYNRAPQFRFIC 402 (565)
Q Consensus 341 ~~~~~~~~~~~~~~~v~l~eve~G~-~YelViTt~---~GLy--------------RYriGDvV~v~gf~~~~P~i~F~g 402 (565)
..++. ..|+ ..||+|+.. .|.| -|++||+.++.. --.+.++|
T Consensus 311 ------------~~~~~----~~~~~~Gei~v~g~~~~~gy~~~~~~t~~~~~~~~~~~TGDlg~~~~----dg~l~~~G 370 (471)
T PRK07787 311 ------------GGPVP----HDGETVGELQVRGPTLFDGYLNRPDATAAAFTADGWFRTGDVAVVDP----DGMHRIVG 370 (471)
T ss_pred ------------CCCCC----CCCCCceEEEEECcccchhhcCChhhchhcccCCCceecCceEEEcC----CCCEEEeC
Confidence 11221 1233 679999864 3433 299999888753 23689999
Q ss_pred ec-CceeeeeecccCHHHHHHHHHH
Q 044130 403 RR-NVVLSIDNDKTNEEDLHKSVTI 426 (565)
Q Consensus 403 R~-~~~l~i~GEkl~e~~v~~av~~ 426 (565)
|. ++++++.|+|++..+|+++|..
T Consensus 371 R~~d~~i~~~G~~v~~~eIE~~l~~ 395 (471)
T PRK07787 371 RESTDLIKSGGYRIGAGEIETALLG 395 (471)
T ss_pred CCCceeEeeCCEEECHHHHHHHHHh
Confidence 96 8999999999999999999965
No 78
>PTZ00342 acyl-CoA synthetase; Provisional
Probab=97.55 E-value=0.00096 Score=77.91 Aligned_cols=130 Identities=15% Similarity=0.188 Sum_probs=78.1
Q ss_pred EEEEEecch---hhhHHHHHHhcCCCCceecccccccceee--eecCCCCCCCCCceeeecCCceeEEeeeCCCCCCccc
Q 044130 266 IEAVVTGSM---AQYIPSLEYYSAGKLPLVGTMYASSECYF--GVNLKPLSNPADVSFTLLPNMCYFEFLPLGGENGTLL 340 (565)
Q Consensus 266 i~~~~~G~~---~~y~~~l~~~~g~~~~~~~~~y~aSEg~~--gi~~~~~~~~~~~~~~l~p~~~ffEFip~~~~~~~~~ 340 (565)
+..+++||. ......++..+| ++++ .+||.||+.. .++......++..|-.+.|+. -+..++.++.+
T Consensus 463 lr~~~sGGapl~~~~~~~~~~~~g--~~i~-~gYGlTEt~~~~~~~~~~~~~~gsvG~p~~pg~-e~ki~d~~~~~---- 534 (746)
T PTZ00342 463 LEVILNGGGKLSPKIAEELSVLLN--VNYY-QGYGLTETTGPIFVQHADDNNTESIGGPISPNT-KYKVRTWETYK---- 534 (746)
T ss_pred eEEEEEcCCCCCHHHHHHHHHhcC--CCEE-EeeccCcccceeeeccCCCCCcccccCcCCCcE-EEEEecccccc----
Confidence 666777773 234455655566 7888 9999999742 222211111223333322332 12223222100
Q ss_pred cccccccccCCCCceeeccCcccCCeEEEEeccc---ccee--------------eeecCCEEEEeeeeCCCCEEEEEee
Q 044130 341 SMEFNEEEEVPNDKLVDLGHVRVGHYYELVVTTF---AGLN--------------RYRIGDVLQVTGFYNRAPQFRFICR 403 (565)
Q Consensus 341 ~~~~~~~~~~~~~~~v~l~eve~G~~YelViTt~---~GLy--------------RYriGDvV~v~gf~~~~P~i~F~gR 403 (565)
....+...||+|... .|.| -|+|||++++.. + -.+.|+||
T Consensus 535 -------------------~~~~~~~GEl~vrGp~v~~GY~~~pe~T~~~f~~dGW~~TGDig~~d~--d--G~l~i~gR 591 (746)
T PTZ00342 535 -------------------ATDTLPKGELLIKSDSIFSGYFLEKEQTKNAFTEDGYFKTGDIVQINK--N--GSLTFLDR 591 (746)
T ss_pred -------------------cCCCCCceEEEEecCcccccccCChhhhhhhcCcCCcccCCcEEEECC--C--CeEEEEcc
Confidence 011223467777432 3443 289999999863 2 37999999
Q ss_pred cCceeee-eecccCHHHHHHHHHH
Q 044130 404 RNVVLSI-DNDKTNEEDLHKSVTI 426 (565)
Q Consensus 404 ~~~~l~i-~GEkl~e~~v~~av~~ 426 (565)
.++++.+ .||++.+.+|++++..
T Consensus 592 ~kdlIkls~Ge~I~p~eIE~~l~~ 615 (746)
T PTZ00342 592 SKGLVKLSQGEYIETDMLNNLYSQ 615 (746)
T ss_pred CCCeEEeCCCEEEchHHHHHHHhc
Confidence 9999996 5999999999999865
No 79
>PLN03052 acetate--CoA ligase; Provisional
Probab=97.54 E-value=0.0051 Score=71.70 Aligned_cols=44 Identities=16% Similarity=0.261 Sum_probs=38.7
Q ss_pred eeecCCEEEEeeeeCCCCEEEEEeecCceeeeeecccCHHHHHHHHHH
Q 044130 379 RYRIGDVLQVTGFYNRAPQFRFICRRNVVLSIDNDKTNEEDLHKSVTI 426 (565)
Q Consensus 379 RYriGDvV~v~gf~~~~P~i~F~gR~~~~l~i~GEkl~e~~v~~av~~ 426 (565)
-|++||++++.. + -.+.|+||.++++++.|+++...+|+.+|..
T Consensus 590 ~~~tGDl~~~d~--d--G~l~i~GR~Dd~I~~~G~rI~~~EIE~~l~~ 633 (728)
T PLN03052 590 LRRHGDIFERTS--G--GYYRAHGRADDTMNLGGIKVSSVEIERVCNA 633 (728)
T ss_pred EEecCceEEECC--C--CeEEEEecCCCEEeeCCEEeCHHHHHHHHHh
Confidence 389999999874 2 3589999999999999999999999999864
No 80
>PRK08276 long-chain-fatty-acid--CoA ligase; Validated
Probab=97.54 E-value=0.005 Score=67.63 Aligned_cols=127 Identities=11% Similarity=0.084 Sum_probs=81.1
Q ss_pred EEEEEecch---hhhHHHHHHhcCCCCceecccccccceee-e-ecCCC-CCCCCCceeeecCCceeEEeeeCCCCCCcc
Q 044130 266 IEAVVTGSM---AQYIPSLEYYSAGKLPLVGTMYASSECYF-G-VNLKP-LSNPADVSFTLLPNMCYFEFLPLGGENGTL 339 (565)
Q Consensus 266 i~~~~~G~~---~~y~~~l~~~~g~~~~~~~~~y~aSEg~~-g-i~~~~-~~~~~~~~~~l~p~~~ffEFip~~~~~~~~ 339 (565)
+.+++.||. ...+..+++.+| .+++ ..||+||+.. . .+... ...+...+..+ +. -++.++.+
T Consensus 264 lr~i~~~g~~~~~~~~~~~~~~~~--~~~~-~~yG~tE~~~~~~~~~~~~~~~~~~~G~~~--~~-~~~i~d~~------ 331 (502)
T PRK08276 264 LRVAIHAAAPCPVEVKRAMIDWWG--PIIH-EYYASSEGGGVTVITSEDWLAHPGSVGKAV--LG-EVRILDED------ 331 (502)
T ss_pred ceEEEecCCCCCHHHHHHHHHHhC--cHhh-hhcccccccceeEecCccccccCCCcceec--cc-EEEEECCC------
Confidence 677777773 345567777776 5666 8899999843 1 11110 00111223222 11 23333211
Q ss_pred ccccccccccCCCCceeeccCcccCCeEEEEecccc---ce--------------eeeecCCEEEEeeeeCCCCEEEEEe
Q 044130 340 LSMEFNEEEEVPNDKLVDLGHVRVGHYYELVVTTFA---GL--------------NRYRIGDVLQVTGFYNRAPQFRFIC 402 (565)
Q Consensus 340 ~~~~~~~~~~~~~~~~v~l~eve~G~~YelViTt~~---GL--------------yRYriGDvV~v~gf~~~~P~i~F~g 402 (565)
.. .+..|+.+||+++... |. -.|++||++++.. .-.+.++|
T Consensus 332 -------------~~-----~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~----~g~~~~~G 389 (502)
T PRK08276 332 -------------GN-----ELPPGEIGTVYFEMDGYPFEYHNDPEKTAAARNPHGWVTVGDVGYLDE----DGYLYLTD 389 (502)
T ss_pred -------------CC-----CCcCCCceEEEEECCCccchhcCCHHHHHHHhcCCCceeecceEEEcC----CcCEEEec
Confidence 11 2457889999999432 11 1468999998863 23689999
Q ss_pred ecCceeeeeecccCHHHHHHHHHH
Q 044130 403 RRNVVLSIDNDKTNEEDLHKSVTI 426 (565)
Q Consensus 403 R~~~~l~i~GEkl~e~~v~~av~~ 426 (565)
|.++++.+.|++++..+|+.++.+
T Consensus 390 R~~~~i~~~G~~v~~~~iE~~i~~ 413 (502)
T PRK08276 390 RKSDMIISGGVNIYPQEIENLLVT 413 (502)
T ss_pred cCcceEEeCCEEeCHHHHHHHHHh
Confidence 999999999999999999999975
No 81
>PLN02861 long-chain-fatty-acid-CoA ligase
Probab=97.52 E-value=0.00044 Score=79.44 Aligned_cols=60 Identities=17% Similarity=0.320 Sum_probs=48.6
Q ss_pred cCCeEEEEecc---ccceee-------------eecCCEEEEeeeeCCCCEEEEEeecCceeee-eecccCHHHHHHHHH
Q 044130 363 VGHYYELVVTT---FAGLNR-------------YRIGDVLQVTGFYNRAPQFRFICRRNVVLSI-DNDKTNEEDLHKSVT 425 (565)
Q Consensus 363 ~G~~YelViTt---~~GLyR-------------YriGDvV~v~gf~~~~P~i~F~gR~~~~l~i-~GEkl~e~~v~~av~ 425 (565)
.|...||.|.. ..|.|. |+|||++++.. + -.+.|+||.++++.+ .||++++.+|+.++.
T Consensus 462 ~~~~GEi~vrGp~v~~GY~~~pe~T~~~f~dGw~~TGDlg~~d~--d--G~l~i~GR~kd~Ik~~~G~~I~p~eIE~~l~ 537 (660)
T PLN02861 462 DVPRGEICLRGNTLFSGYHKRQDLTEEVLIDGWFHTGDIGEWQP--N--GAMKIIDRKKNIFKLSQGEYVAVENLENTYS 537 (660)
T ss_pred CCCceeEEEcCCcccccccCCHHHHHhhhhccCcccCceEEECC--C--CcEEEEeccccceEcCCCeEEcHHHHHHHHh
Confidence 45567888855 356663 89999999874 2 368999999999997 699999999999986
Q ss_pred H
Q 044130 426 I 426 (565)
Q Consensus 426 ~ 426 (565)
+
T Consensus 538 ~ 538 (660)
T PLN02861 538 R 538 (660)
T ss_pred c
Confidence 5
No 82
>PRK08279 long-chain-acyl-CoA synthetase; Validated
Probab=97.52 E-value=0.00084 Score=75.83 Aligned_cols=146 Identities=14% Similarity=0.152 Sum_probs=82.5
Q ss_pred CCCCceEEEEEecch-hhhHHHHHHhcCCCCceecccccccceeeeecCCCCCCCCCceeeecCCceeEEeeeCCCCCCc
Q 044130 260 WPRAKYIEAVVTGSM-AQYIPSLEYYSAGKLPLVGTMYASSECYFGVNLKPLSNPADVSFTLLPNMCYFEFLPLGGENGT 338 (565)
Q Consensus 260 WP~l~~i~~~~~G~~-~~y~~~l~~~~g~~~~~~~~~y~aSEg~~gi~~~~~~~~~~~~~~l~p~~~ffEFip~~~~~~~ 338 (565)
.++++ ++..++. ..-.+++.+.+|. ..++ ..||.||+.+++.. ....++..+........-+.++..+.....
T Consensus 313 ~~~l~---~~~g~~l~~~~~~~~~~~~~~-~~l~-~~YG~tE~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 386 (600)
T PRK08279 313 DHRLR---LMIGNGLRPDIWDEFQQRFGI-PRIL-EFYAASEGNVGFIN-VFNFDGTVGRVPLWLAHPYAIVKYDVDTGE 386 (600)
T ss_pred Cccee---EEecCCCCHHHHHHHHHHhCc-ceee-eeecccccceeecc-cCCCCcccccccccccccceeeeeccCcCc
Confidence 45533 3444443 3456777777875 5577 99999998654321 111122233221100001222222211000
Q ss_pred cccccccccccCCCCceeeccCcccCCeEEEEec--c---ccce-------------------eeeecCCEEEEeeeeCC
Q 044130 339 LLSMEFNEEEEVPNDKLVDLGHVRVGHYYELVVT--T---FAGL-------------------NRYRIGDVLQVTGFYNR 394 (565)
Q Consensus 339 ~~~~~~~~~~~~~~~~~v~l~eve~G~~YelViT--t---~~GL-------------------yRYriGDvV~v~gf~~~ 394 (565)
.-. ...-.+.++..|+..|+++. . +.|. --|++||++++.. +
T Consensus 387 ----------~i~-~~~~~~~~~~~g~~Gel~~~i~~~~~~~GY~~~~~t~~~~~~~~~~~~~~~~~TGDlg~~~~--d- 452 (600)
T PRK08279 387 ----------PVR-DADGRCIKVKPGEVGLLIGRITDRGPFDGYTDPEASEKKILRDVFKKGDAWFNTGDLMRDDG--F- 452 (600)
T ss_pred ----------eee-CCCCccccCCCCCceeEEEEecCcccccccCCchhhHHHHhhcccCCCCceEeecceEEEcC--C-
Confidence 000 00112234678888888742 1 1121 1289999988874 2
Q ss_pred CCEEEEEeecCceeeeeecccCHHHHHHHHHH
Q 044130 395 APQFRFICRRNVVLSIDNDKTNEEDLHKSVTI 426 (565)
Q Consensus 395 ~P~i~F~gR~~~~l~i~GEkl~e~~v~~av~~ 426 (565)
-.+.|+||.++++++.|+++...+|++++.+
T Consensus 453 -G~l~~~GR~~d~ik~~G~~i~p~eIE~~l~~ 483 (600)
T PRK08279 453 -GHAQFVDRLGDTFRWKGENVATTEVENALSG 483 (600)
T ss_pred -ccEEEecccCCeEEECCcccCHHHHHHHHhc
Confidence 2699999999999999999999999999976
No 83
>PRK12476 putative fatty-acid--CoA ligase; Provisional
Probab=97.51 E-value=0.0028 Score=71.93 Aligned_cols=64 Identities=19% Similarity=0.188 Sum_probs=52.5
Q ss_pred CcccCCeEEEEeccc---ccee--------------------------------eeecCCEEEEeeeeCCCCEEEEEeec
Q 044130 360 HVRVGHYYELVVTTF---AGLN--------------------------------RYRIGDVLQVTGFYNRAPQFRFICRR 404 (565)
Q Consensus 360 eve~G~~YelViTt~---~GLy--------------------------------RYriGDvV~v~gf~~~~P~i~F~gR~ 404 (565)
++.+|+.+||.|... .|.| -|++||+.++. ++ .+.|+||.
T Consensus 423 ~~~~g~~GEl~v~g~~v~~GY~~~~~~t~~~f~~~~~~~~~~g~~~~~~~~~~~w~~TGDlg~~~---dG--~l~i~GR~ 497 (612)
T PRK12476 423 ELPDGEVGEIWLHGDNIGRGYWGRPEETERTFGAKLQSRLAEGSHADGAADDGTWLRTGDLGVYL---DG--ELYITGRI 497 (612)
T ss_pred CCCCCCEEEEEEcCCcccccccCChHHHHHHHhhhhccccccccccccccCCCCeeeccccceeE---CC--EEEEEecc
Confidence 466899999999763 3443 58999999763 33 59999999
Q ss_pred CceeeeeecccCHHHHHHHHHHHH
Q 044130 405 NVVLSIDNDKTNEEDLHKSVTIAK 428 (565)
Q Consensus 405 ~~~l~i~GEkl~e~~v~~av~~~~ 428 (565)
++++++.|++++..+|+.++.+..
T Consensus 498 ~d~I~~~G~~I~p~eIE~~l~~~~ 521 (612)
T PRK12476 498 ADLIVIDGRNHYPQDIEATVAEAS 521 (612)
T ss_pred CcEEEECCcccCHHHHHHHHHHhc
Confidence 999999999999999999997643
No 84
>PRK07798 acyl-CoA synthetase; Validated
Probab=97.51 E-value=0.0009 Score=73.60 Aligned_cols=130 Identities=15% Similarity=0.067 Sum_probs=78.6
Q ss_pred EEEEEecch---hhhHHHHHHhcCCCCceeccccccccee-eeecCCCCCCCCCceeeecCCceeEEeeeCCCCCCcccc
Q 044130 266 IEAVVTGSM---AQYIPSLEYYSAGKLPLVGTMYASSECY-FGVNLKPLSNPADVSFTLLPNMCYFEFLPLGGENGTLLS 341 (565)
Q Consensus 266 i~~~~~G~~---~~y~~~l~~~~g~~~~~~~~~y~aSEg~-~gi~~~~~~~~~~~~~~l~p~~~ffEFip~~~~~~~~~~ 341 (565)
+..+.+||. .....++++.+++ ++++ ..||+||.. ++......++....+-...+.. -.+.++.+
T Consensus 298 l~~i~~gG~~~~~~~~~~~~~~~~~-~~~~-~~YG~tE~~~~~~~~~~~~~~~~g~~~~~~~~-~~~i~~~~-------- 366 (533)
T PRK07798 298 LFAIASGGALFSPSVKEALLELLPN-VVLT-DSIGSSETGFGGSGTVAKGAVHTGGPRFTIGP-RTVVLDED-------- 366 (533)
T ss_pred eEEEEECCCCCCHHHHHHHHHHcCC-CeEE-eeecccccccccccCCCCCCccCCCCccCCCc-eEEEECCC--------
Confidence 677777773 3455667777766 8888 999999963 2222211111111110112222 23344322
Q ss_pred ccccccccCCCCceeeccCcccCCe--EEEEeccc-------------------cceeeeecCCEEEEeeeeCCCCEEEE
Q 044130 342 MEFNEEEEVPNDKLVDLGHVRVGHY--YELVVTTF-------------------AGLNRYRIGDVLQVTGFYNRAPQFRF 400 (565)
Q Consensus 342 ~~~~~~~~~~~~~~v~l~eve~G~~--YelViTt~-------------------~GLyRYriGDvV~v~gf~~~~P~i~F 400 (565)
.++ +.+|+. .+++.+.. .|-.-|++||++++.. .-.+.|
T Consensus 367 -----------~~~-----~~~g~~~~g~l~~~~~~~~gy~~~~~~t~~~f~~~~~~~~~~TGD~~~~~~----~g~l~~ 426 (533)
T PRK07798 367 -----------GNP-----VEPGSGEIGWIARRGHIPLGYYKDPEKTAETFPTIDGVRYAIPGDRARVEA----DGTITL 426 (533)
T ss_pred -----------CCC-----CCCCCCCeeEEEeecCccccccCChhhhHHhhccCCCCceEEcCcEEEEcC----CCcEEE
Confidence 122 234444 55655432 2223578999998863 236889
Q ss_pred EeecCceeeeeecccCHHHHHHHHHH
Q 044130 401 ICRRNVVLSIDNDKTNEEDLHKSVTI 426 (565)
Q Consensus 401 ~gR~~~~l~i~GEkl~e~~v~~av~~ 426 (565)
+||.++++++.|++++..+|+.++.+
T Consensus 427 ~GR~~~~i~~~G~~v~~~eIE~~l~~ 452 (533)
T PRK07798 427 LGRGSVCINTGGEKVFPEEVEEALKA 452 (533)
T ss_pred EccccceEecCCEEeCHHHHHHHHHh
Confidence 99999999999999999999999865
No 85
>COG0365 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism]
Probab=97.50 E-value=0.0068 Score=67.86 Aligned_cols=184 Identities=14% Similarity=0.139 Sum_probs=110.4
Q ss_pred EEEEEecc--h-hhhHHHHHHhcCCCCceecccccccceeeeecCCCC---CCCCCceeeecCCceeEEeeeCCCCCCcc
Q 044130 266 IEAVVTGS--M-AQYIPSLEYYSAGKLPLVGTMYASSECYFGVNLKPL---SNPADVSFTLLPNMCYFEFLPLGGENGTL 339 (565)
Q Consensus 266 i~~~~~G~--~-~~y~~~l~~~~g~~~~~~~~~y~aSEg~~gi~~~~~---~~~~~~~~~l~p~~~ffEFip~~~~~~~~ 339 (565)
|..+.+.| . ..-...+.+.+| +++. ++||.||...+ .+.+. -+++ .+.. +|.. -.+-++.+
T Consensus 292 Lr~~~SaGEPLnpe~~~w~~~~~g--~~i~-d~~gqTEtg~~-~~~~~~~~~~g~-~g~p-~pG~-~~~vvdd~------ 358 (528)
T COG0365 292 LRVLGSAGEPLNPEAFEWFYSALG--VWIL-DIYGQTETGMG-FIAGRPPVKNGS-SGLP-LPGY-AVRRVDDE------ 358 (528)
T ss_pred heeeeccCCCCCHHHHHHHHHHhC--CCEe-ccccccccCcc-ccCCCCCcCCCC-CCCC-CCCc-eeEEECCC------
Confidence 55555555 2 244466667777 8988 99999998722 12221 1222 2332 3322 23444433
Q ss_pred ccccccccccCCCCceeeccCcccCCeEEEEeccc-----cceee-------------eecCCEEEEeeeeCCCCEEEEE
Q 044130 340 LSMEFNEEEEVPNDKLVDLGHVRVGHYYELVVTTF-----AGLNR-------------YRIGDVLQVTGFYNRAPQFRFI 401 (565)
Q Consensus 340 ~~~~~~~~~~~~~~~~v~l~eve~G~~YelViTt~-----~GLyR-------------YriGDvV~v~gf~~~~P~i~F~ 401 (565)
.+. +.+|+ .+|||... -|+|+ |.+||...+.- --.|-|+
T Consensus 359 -------------g~~-----~~~~~-G~Lvi~~~~p~~~~~~w~d~er~~~~y~~~~y~tGD~~~~De----dGy~~i~ 415 (528)
T COG0365 359 -------------GNP-----VPPGV-GELVVRLPWPGMALTYWNDPERYKEAYFGRWYRTGDWAERDE----DGYFWLH 415 (528)
T ss_pred -------------CCc-----CCCCc-eEEEEeCCCchhhhhhhCCHHHHHHHHhhceeecCceeEEcc----CCCEEEE
Confidence 122 44777 99999864 46777 99999988873 2589999
Q ss_pred eecCceeeeeecccCHHHHHHHHHHHHhhcccCCCeEEeEEEe-ecCCCCCceeEEEEEEEecCCCCCCCChHHHHHHHH
Q 044130 402 CRRNVVLSIDNDKTNEEDLHKSVTIAKNLLEPYSALLVEYTSY-ADTSTVPGHYVLYWEIQIVDSPALPLDHQKVLEECC 480 (565)
Q Consensus 402 gR~~~~l~i~GEkl~e~~v~~av~~~~~~l~~~g~~l~~f~~~-~d~~~~p~~Y~l~~e~e~~~~~~~~~~~~~~l~~~~ 480 (565)
||.++++++.|..+...+|++||.+.. .|.|=.|+ .+.....---..|+-+.. . .. . . ++.
T Consensus 416 GR~DDvI~vsG~Rig~~EvE~~l~~hP--------~VaEaAvVg~pd~~kg~~v~afVvL~~--g----~~-~-~--~L~ 477 (528)
T COG0365 416 GRSDDVIKVSGKRIGPLEIESVLLAHP--------AVAEAAVVGVPDPGKGQIVLAFVVLAA--G----VE-P-N--ELA 477 (528)
T ss_pred eeccceEeccCeeccHHHHHHHHHhCc--------ceeeeEEEeccCCCCCcEEEEEEEecC--C----CC-h-H--HHH
Confidence 999999999999999999999997632 23344443 222222222235666642 2 11 1 1 555
Q ss_pred HHHHHHhChHHHHhhccCCcc-CCeEEEEeC
Q 044130 481 IAVEEQLDYVYRRCRSHDKSV-GPLEIRVVE 510 (565)
Q Consensus 481 ~~ld~~Ln~~Y~~~R~~~g~l-~p~~v~~v~ 510 (565)
++|.+.+ |+..|.+ .|-+|.+|+
T Consensus 478 ~ei~~~v-------r~~~~~~~~p~~i~fv~ 501 (528)
T COG0365 478 EEIRRHV-------ARNIGPHAIPRKIRFVD 501 (528)
T ss_pred HHHHHHH-------HhccCcccCCceEEEec
Confidence 6666655 4333344 556677764
No 86
>PRK07769 long-chain-fatty-acid--CoA ligase; Validated
Probab=97.50 E-value=0.0005 Score=78.27 Aligned_cols=63 Identities=19% Similarity=0.157 Sum_probs=52.2
Q ss_pred CcccCCeEEEEeccc---ccee-------------------------------eeecCCEEEEeeeeCCCCEEEEEeecC
Q 044130 360 HVRVGHYYELVVTTF---AGLN-------------------------------RYRIGDVLQVTGFYNRAPQFRFICRRN 405 (565)
Q Consensus 360 eve~G~~YelViTt~---~GLy-------------------------------RYriGDvV~v~gf~~~~P~i~F~gR~~ 405 (565)
++..|+.+||+|... .|.| -|++||+.++. + -.+.|+||.+
T Consensus 412 ~~~~ge~GEl~v~gp~v~~GY~~~~~~t~~~f~~~~~~~~~~~~~~~~~~~~gw~~TGDlg~~~---d--G~l~i~GR~~ 486 (631)
T PRK07769 412 ELPDGQIGEIWLHGNNIGTGYWGKPEETAATFQNILKSRLSESHAEGAPDDALWVRTGDYGVYF---D--GELYITGRVK 486 (631)
T ss_pred CCCCCCEEEEEecCCCccccccCChhHHHHHHhhhcccccccccccCcccCCCeeeccccccEE---C--CEEEEEcccc
Confidence 467899999999763 2322 38999999874 2 3699999999
Q ss_pred ceeeeeecccCHHHHHHHHHHH
Q 044130 406 VVLSIDNDKTNEEDLHKSVTIA 427 (565)
Q Consensus 406 ~~l~i~GEkl~e~~v~~av~~~ 427 (565)
+++.+.|++++..+|+.++.+.
T Consensus 487 d~Ik~~G~~V~p~eIE~~l~~~ 508 (631)
T PRK07769 487 DLVIIDGRNHYPQDLEYTAQEA 508 (631)
T ss_pred cEEEECCeeeCHHHHHHHHHhc
Confidence 9999999999999999999764
No 87
>PRK06178 acyl-CoA synthetase; Validated
Probab=97.49 E-value=0.0045 Score=69.29 Aligned_cols=62 Identities=18% Similarity=0.266 Sum_probs=49.6
Q ss_pred cccCCeEEEEecccc---ce----------e---eeecCCEEEEeeeeCCCCEEEEEeecCceeeeeecccCHHHHHHHH
Q 044130 361 VRVGHYYELVVTTFA---GL----------N---RYRIGDVLQVTGFYNRAPQFRFICRRNVVLSIDNDKTNEEDLHKSV 424 (565)
Q Consensus 361 ve~G~~YelViTt~~---GL----------y---RYriGDvV~v~gf~~~~P~i~F~gR~~~~l~i~GEkl~e~~v~~av 424 (565)
+..|+..||++++.. |. + .|++||++++.+ .-.+.|+||.++++.+.|++++..+|++++
T Consensus 409 ~~~g~~Gel~v~g~~v~~gY~~~~~~~~~~~~dg~~~TGDl~~~~~----~g~l~i~GR~~d~i~~~G~~i~~~eiE~~l 484 (567)
T PRK06178 409 LPLGAEGEIVVRTPSLLKGYWNKPEATAEALRDGWLHTGDIGKIDE----QGFLHYLGRRKEMLKVNGMSVFPSEVEALL 484 (567)
T ss_pred CCCCCceEEEEECCcccccccCChhhhhhcccCCceeecceEEEec----CCeEEEEecccccEEECCEEECHHHHHHHH
Confidence 347788899996532 21 1 489999998863 236899999999999999999999999998
Q ss_pred HH
Q 044130 425 TI 426 (565)
Q Consensus 425 ~~ 426 (565)
..
T Consensus 485 ~~ 486 (567)
T PRK06178 485 GQ 486 (567)
T ss_pred Hh
Confidence 65
No 88
>PRK09192 acyl-CoA synthetase; Validated
Probab=97.49 E-value=0.0042 Score=69.93 Aligned_cols=62 Identities=11% Similarity=0.038 Sum_probs=51.4
Q ss_pred cccCCeEEEEeccc---ccee-------------eeecCCEEEEeeeeCCCCEEEEEeecCceeeeeecccCHHHHHHHH
Q 044130 361 VRVGHYYELVVTTF---AGLN-------------RYRIGDVLQVTGFYNRAPQFRFICRRNVVLSIDNDKTNEEDLHKSV 424 (565)
Q Consensus 361 ve~G~~YelViTt~---~GLy-------------RYriGDvV~v~gf~~~~P~i~F~gR~~~~l~i~GEkl~e~~v~~av 424 (565)
+..|+..||+|+.. .|.| .|++||++.+ . ++ .+.|+||.++++++.|++++..+|+++|
T Consensus 406 ~~~g~~Gel~i~g~~~~~gY~~~~~~~~~~~~dgw~~TGDlg~~-~--~G--~l~~~GR~dd~i~~~G~~v~p~eIE~~l 480 (579)
T PRK09192 406 LPERVVGHICVRGPSLMSGYFRDEESQDVLAADGWLDTGDLGYL-L--DG--YLYITGRAKDLIIINGRNIWPQDIEWIA 480 (579)
T ss_pred CCCCCEEEEEecCCchhhhhcCCccccccccCCceeeccceeeE-E--CC--EEEEEeccccEEEECCCccCHHHHHHHH
Confidence 55788999999764 3333 4899999976 3 33 7999999999999999999999999999
Q ss_pred HHH
Q 044130 425 TIA 427 (565)
Q Consensus 425 ~~~ 427 (565)
...
T Consensus 481 ~~~ 483 (579)
T PRK09192 481 EQE 483 (579)
T ss_pred Hhc
Confidence 874
No 89
>PRK07824 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=97.47 E-value=0.0029 Score=66.54 Aligned_cols=43 Identities=9% Similarity=0.139 Sum_probs=38.6
Q ss_pred eeecCCEEEEeeeeCCCCEEEEEeecCceeeeeecccCHHHHHHHHHH
Q 044130 379 RYRIGDVLQVTGFYNRAPQFRFICRRNVVLSIDNDKTNEEDLHKSVTI 426 (565)
Q Consensus 379 RYriGDvV~v~gf~~~~P~i~F~gR~~~~l~i~GEkl~e~~v~~av~~ 426 (565)
+|++||++++. . -.+.|+||.++++++.|++++..+|+.++.+
T Consensus 235 ~~~TGDl~~~~---~--g~l~i~GR~~d~i~~~G~~v~p~eIE~~l~~ 277 (358)
T PRK07824 235 WFRTDDLGALD---D--GVLTVLGRADDAISTGGLTVLPQVVEAALAT 277 (358)
T ss_pred ceecccEEEEe---C--CEEEEEeccCCeEEECCEEECHHHHHHHHHh
Confidence 79999999982 2 2789999999999999999999999999975
No 90
>COG0318 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.46 E-value=0.00082 Score=75.29 Aligned_cols=130 Identities=17% Similarity=0.186 Sum_probs=85.0
Q ss_pred EEEEEecch---hhhHHHHHHhcCCCCceecccccccceee-eecCCCCC---CCCCceeeecCCceeEEeeeCCCCCCc
Q 044130 266 IEAVVTGSM---AQYIPSLEYYSAGKLPLVGTMYASSECYF-GVNLKPLS---NPADVSFTLLPNMCYFEFLPLGGENGT 338 (565)
Q Consensus 266 i~~~~~G~~---~~y~~~l~~~~g~~~~~~~~~y~aSEg~~-gi~~~~~~---~~~~~~~~l~p~~~ffEFip~~~~~~~ 338 (565)
+.++++||. ....+++++.++. .+++ .+||.||+.. .....+.. .....+. ..|+ .-..-++.+.
T Consensus 293 lr~~~~gg~~~~~~~~~~~~~~~~~-~~i~-~~YG~TE~~~~~~~~~~~~~~~~~~~~G~-~~pg-~~v~Ivd~~~---- 364 (534)
T COG0318 293 LRLVLSGGAPLPPELLERFEERFGP-IAIL-EGYGLTETSPVVTINPPDDLLAKPGSVGR-PLPG-VEVRIVDPDG---- 364 (534)
T ss_pred eEEEEecCCcCCHHHHHHHHHHhCC-CceE-EeecccccCceeecCCCchhhhcCCcccc-cCCC-cEEEEEeCCC----
Confidence 788888884 4677888888886 6777 9999999963 22222111 1111222 1222 1222222221
Q ss_pred cccccccccccCCCCceeeccCcccCCeEEEEeccc---ccee--------------eeecCCEEEEeeeeCCCCEEEEE
Q 044130 339 LLSMEFNEEEEVPNDKLVDLGHVRVGHYYELVVTTF---AGLN--------------RYRIGDVLQVTGFYNRAPQFRFI 401 (565)
Q Consensus 339 ~~~~~~~~~~~~~~~~~v~l~eve~G~~YelViTt~---~GLy--------------RYriGDvV~v~gf~~~~P~i~F~ 401 (565)
.. +.+|+.+||.|-.. .|.| -|++||+.++.. .-.+.|+
T Consensus 365 --------------~~------~~pg~vGei~irgp~v~~GY~~~pe~t~~~f~~~gW~~TGDlg~~d~----~G~l~i~ 420 (534)
T COG0318 365 --------------GE------VLPGEVGEIWVRGPNVMKGYWNRPEATAEAFDEDGWLRTGDLGYVDE----DGYLYIV 420 (534)
T ss_pred --------------Cc------cCCCCceEEEEECchhhhhhcCChHHHHHhhccCCeeeecceEEEcC----CccEEEE
Confidence 11 12277888888533 4533 189999997764 2469999
Q ss_pred eecCceeeeeecccCHHHHHHHHHHH
Q 044130 402 CRRNVVLSIDNDKTNEEDLHKSVTIA 427 (565)
Q Consensus 402 gR~~~~l~i~GEkl~e~~v~~av~~~ 427 (565)
||.+++++..||++++.+|+.++.+.
T Consensus 421 gR~kd~I~~gG~ni~p~eiE~~l~~~ 446 (534)
T COG0318 421 GRLKDLIISGGENIYPEEIEAVLAEH 446 (534)
T ss_pred eccceEEEeCCeEECHHHHHHHHHhC
Confidence 99999999999999999999999764
No 91
>PRK08008 caiC putative crotonobetaine/carnitine-CoA ligase; Validated
Probab=97.46 E-value=0.00082 Score=74.09 Aligned_cols=62 Identities=16% Similarity=0.217 Sum_probs=49.8
Q ss_pred cccCCeEEEEeccc------ccee--------------eeecCCEEEEeeeeCCCCEEEEEeecCceeeeeecccCHHHH
Q 044130 361 VRVGHYYELVVTTF------AGLN--------------RYRIGDVLQVTGFYNRAPQFRFICRRNVVLSIDNDKTNEEDL 420 (565)
Q Consensus 361 ve~G~~YelViTt~------~GLy--------------RYriGDvV~v~gf~~~~P~i~F~gR~~~~l~i~GEkl~e~~v 420 (565)
+..|+..||+++.. .|.| -|++||+.++.. .-.+.|+||.++++++.|++++..+|
T Consensus 361 ~~~g~~Gel~v~g~~~~~~~~gy~~~~~~~~~~~~~~g~~~TGDl~~~~~----~g~~~~~GR~~d~i~~~G~~i~p~~i 436 (517)
T PRK08008 361 LPAGEIGEICIKGVPGKTIFKEYYLDPKATAKVLEADGWLHTGDTGYVDE----EGFFYFVDRRCNMIKRGGENVSCVEL 436 (517)
T ss_pred CCCCCcceEEEeCCCCcchhhhHhCChHHHhhcccCCCCeeccceEEECC----CCcEEEeecccceEEeCCEEECHHHH
Confidence 45788999999853 1221 289999877753 34788999999999999999999999
Q ss_pred HHHHHH
Q 044130 421 HKSVTI 426 (565)
Q Consensus 421 ~~av~~ 426 (565)
+.++..
T Consensus 437 E~~l~~ 442 (517)
T PRK08008 437 ENIIAT 442 (517)
T ss_pred HHHHHh
Confidence 999865
No 92
>PLN02387 long-chain-fatty-acid-CoA ligase family protein
Probab=97.46 E-value=0.00072 Score=78.25 Aligned_cols=132 Identities=15% Similarity=0.202 Sum_probs=78.9
Q ss_pred EEEEEecchh--h-hHHHHHHhcCCCCceecccccccceeee--ecCCCCCCCCCceeeecCCceeEEeeeCCCCCCccc
Q 044130 266 IEAVVTGSMA--Q-YIPSLEYYSAGKLPLVGTMYASSECYFG--VNLKPLSNPADVSFTLLPNMCYFEFLPLGGENGTLL 340 (565)
Q Consensus 266 i~~~~~G~~~--~-y~~~l~~~~g~~~~~~~~~y~aSEg~~g--i~~~~~~~~~~~~~~l~p~~~ffEFip~~~~~~~~~ 340 (565)
+..+++||.. + -...++..+| ++++ .+||.||+..+ ++......++..|- .+|+ .-...+++++.+
T Consensus 422 lr~i~~GGapl~~~~~~~~~~~~g--~~v~-~~YG~TEt~~~~~~~~~~~~~~gsvG~-p~p~-~evkivd~~~~~---- 492 (696)
T PLN02387 422 IRFMLSGGAPLSGDTQRFINICLG--APIG-QGYGLTETCAGATFSEWDDTSVGRVGP-PLPC-CYVKLVSWEEGG---- 492 (696)
T ss_pred EEEEEEcCCCCCHHHHHHHHHHcC--CCee-EeechhhcccceeecCcccCCCCccCC-CCCc-eEEEEeeccccC----
Confidence 6777788732 2 2233444455 7888 99999998533 22111111122222 1232 234555533211
Q ss_pred cccccccccCCCCceeeccCcccCCeEEEEeccc---ccee------------------eeecCCEEEEeeeeCCCCEEE
Q 044130 341 SMEFNEEEEVPNDKLVDLGHVRVGHYYELVVTTF---AGLN------------------RYRIGDVLQVTGFYNRAPQFR 399 (565)
Q Consensus 341 ~~~~~~~~~~~~~~~v~l~eve~G~~YelViTt~---~GLy------------------RYriGDvV~v~gf~~~~P~i~ 399 (565)
..+. -+++...||+|... .|.| -|+|||+.++.. --.+.
T Consensus 493 -------------~~~~---~~~~p~GEi~vrGp~v~~GY~~~pe~T~~~f~~d~~G~~W~~TGDig~~d~----dG~l~ 552 (696)
T PLN02387 493 -------------YLIS---DKPMPRGEIVIGGPSVTLGYFKNQEKTDEVYKVDERGMRWFYTGDIGQFHP----DGCLE 552 (696)
T ss_pred -------------cccC---CCCCCCceEEeccCcccchhcCCHHHHhhhhccccCCCceeecCceEEECC----CCcEE
Confidence 0010 01233467887553 4444 589999999863 23699
Q ss_pred EEeecCceeee-eecccCHHHHHHHHHH
Q 044130 400 FICRRNVVLSI-DNDKTNEEDLHKSVTI 426 (565)
Q Consensus 400 F~gR~~~~l~i-~GEkl~e~~v~~av~~ 426 (565)
|+||.++++.+ .||++++.+|+.++.+
T Consensus 553 i~gR~kd~ik~~~Ge~I~p~eIE~~l~~ 580 (696)
T PLN02387 553 IIDRKKDIVKLQHGEYVSLGKVEAALSV 580 (696)
T ss_pred EEEcccceEECCCCeEEchHHHHHHHhc
Confidence 99999999998 5999999999999865
No 93
>PRK03640 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=97.46 E-value=0.00079 Score=73.34 Aligned_cols=62 Identities=15% Similarity=0.148 Sum_probs=51.7
Q ss_pred cccCCeEEEEecccc---cee-------------eeecCCEEEEeeeeCCCCEEEEEeecCceeeeeecccCHHHHHHHH
Q 044130 361 VRVGHYYELVVTTFA---GLN-------------RYRIGDVLQVTGFYNRAPQFRFICRRNVVLSIDNDKTNEEDLHKSV 424 (565)
Q Consensus 361 ve~G~~YelViTt~~---GLy-------------RYriGDvV~v~gf~~~~P~i~F~gR~~~~l~i~GEkl~e~~v~~av 424 (565)
+.+|+..||++++.+ |.+ .|++||++++.. + ..+.|+||.++++++.|++++..+|+.++
T Consensus 327 ~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~~tGDl~~~~~--~--g~l~~~GR~~~~i~~~G~~v~~~~ie~~i 402 (483)
T PRK03640 327 VPPFEEGEIVVKGPNVTKGYLNREDATRETFQDGWFKTGDIGYLDE--E--GFLYVLDRRSDLIISGGENIYPAEIEEVL 402 (483)
T ss_pred CCCCCceEEEEECcchhhhhcCCHHHHHHHHhcCCeeccceEEEcC--C--CCEEEeecccCeEEeCCEEECHHHHHHHH
Confidence 568999999998852 222 489999999864 2 35889999999999999999999999999
Q ss_pred HH
Q 044130 425 TI 426 (565)
Q Consensus 425 ~~ 426 (565)
..
T Consensus 403 ~~ 404 (483)
T PRK03640 403 LS 404 (483)
T ss_pred Hh
Confidence 65
No 94
>PLN03102 acyl-activating enzyme; Provisional
Probab=97.43 E-value=0.00068 Score=76.49 Aligned_cols=59 Identities=12% Similarity=0.116 Sum_probs=49.4
Q ss_pred CCeEEEEeccc---ccee-------------eeecCCEEEEeeeeCCCCEEEEEeecCceeeeeecccCHHHHHHHHHH
Q 044130 364 GHYYELVVTTF---AGLN-------------RYRIGDVLQVTGFYNRAPQFRFICRRNVVLSIDNDKTNEEDLHKSVTI 426 (565)
Q Consensus 364 G~~YelViTt~---~GLy-------------RYriGDvV~v~gf~~~~P~i~F~gR~~~~l~i~GEkl~e~~v~~av~~ 426 (565)
|+.+||+|++. .|.| +|++||+++... .-.+.|+||.++++.+.|++++..+|+.++..
T Consensus 390 ~~~GEl~v~g~~~~~GY~~~~~~t~~~f~~gw~~TGDlg~~d~----dG~l~i~GR~~d~i~~~G~~v~p~eIE~~l~~ 464 (579)
T PLN03102 390 KTMGEIVIKGSSIMKGYLKNPKATSEAFKHGWLNTGDVGVIHP----DGHVEIKDRSKDIIISGGENISSVEVENVLYK 464 (579)
T ss_pred CCceEEEEECcchhhhhcCChhhhHhhhccCceecCceEEEcC----CCeEEEEeccCcEEEECCEEECHHHHHHHHHh
Confidence 35789999763 4544 699999999853 34789999999999999999999999999975
No 95
>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated
Probab=97.43 E-value=0.0012 Score=76.56 Aligned_cols=45 Identities=13% Similarity=0.140 Sum_probs=38.9
Q ss_pred eeecCCEEEEeeeeCCCCEEEEEeecCceeeeeecccCHHHHHHHHHHH
Q 044130 379 RYRIGDVLQVTGFYNRAPQFRFICRRNVVLSIDNDKTNEEDLHKSVTIA 427 (565)
Q Consensus 379 RYriGDvV~v~gf~~~~P~i~F~gR~~~~l~i~GEkl~e~~v~~av~~~ 427 (565)
.|++||+.++.. --.+.|+||.++++.+.|+++++.+|+.++...
T Consensus 592 w~~TGDlg~~d~----dG~l~i~GR~~d~I~~~G~~V~p~eIE~~l~~~ 636 (718)
T PRK08043 592 WYDTGDIVRFDE----QGFVQIQGRAKRFAKIAGEMVSLEMVEQLALGV 636 (718)
T ss_pred eEecCCEEEEcC----CCcEEEEecCCCeeEeCcEEcCHHHHHHHHHhC
Confidence 489999999863 225889999999999999999999999988653
No 96
>PRK05857 acyl-CoA synthetase; Validated
Probab=97.42 E-value=0.0012 Score=73.68 Aligned_cols=65 Identities=12% Similarity=0.111 Sum_probs=52.9
Q ss_pred ccCcccCCeEEEEeccc---ccee-------------eeecCCEEEEeeeeCCCCEEEEEeecCceeeeeecccCHHHHH
Q 044130 358 LGHVRVGHYYELVVTTF---AGLN-------------RYRIGDVLQVTGFYNRAPQFRFICRRNVVLSIDNDKTNEEDLH 421 (565)
Q Consensus 358 l~eve~G~~YelViTt~---~GLy-------------RYriGDvV~v~gf~~~~P~i~F~gR~~~~l~i~GEkl~e~~v~ 421 (565)
...+..|+..||+|+.. .|.| -|++||+++.. ..-.+.|+||.++++.+.|++++..+|+
T Consensus 366 ~~~~~~~~~Gel~v~g~~~~~GY~~~~~~t~~~~~~g~~~TGDlg~~d----~~g~l~~~GR~~~~ik~~G~~v~p~eIE 441 (540)
T PRK05857 366 PGAGPSASFGTLWIKSPANMLGYWNNPERTAEVLIDGWVNTGDLLERR----EDGFFYIKGRSSEMIICGGVNIAPDEVD 441 (540)
T ss_pred cccCCCCCcceEEEeCcchhhhhhCCccchhhhcCCCceeccceEEEc----CCceEEEeccccccEecCCEEECHHHHH
Confidence 33556788999999875 2433 38999999874 3347999999999999999999999999
Q ss_pred HHHHH
Q 044130 422 KSVTI 426 (565)
Q Consensus 422 ~av~~ 426 (565)
.++..
T Consensus 442 ~~l~~ 446 (540)
T PRK05857 442 RIAEG 446 (540)
T ss_pred HHHHh
Confidence 99965
No 97
>KOG1175 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=97.41 E-value=0.01 Score=67.22 Aligned_cols=143 Identities=12% Similarity=0.123 Sum_probs=88.3
Q ss_pred eecCCEEEEeeeeCCCCEEEEEeecCceeeeeecccCHHHHHHHHHHHHhhcccCCCeEEeEEEeecCCCCCcee-EEEE
Q 044130 380 YRIGDVLQVTGFYNRAPQFRFICRRNVVLSIDNDKTNEEDLHKSVTIAKNLLEPYSALLVEYTSYADTSTVPGHY-VLYW 458 (565)
Q Consensus 380 YriGDvV~v~gf~~~~P~i~F~gR~~~~l~i~GEkl~e~~v~~av~~~~~~l~~~g~~l~~f~~~~d~~~~p~~Y-~l~~ 458 (565)
|.+||-.+.+ +.--+.++||.||++|+.|-+++-.+|+.||.+. + .|.|=+|+.......+.- ..|+
T Consensus 477 y~tGD~~~rd----~dGY~~i~GR~DDviNvsGhRigtaEIE~al~~h-p-------~VaEsAvVg~p~~~~ge~v~aFv 544 (626)
T KOG1175|consen 477 YFTGDGGRRD----EDGYYWILGRVDDVINVSGHRIGTAEIESALVEH-P-------AVAESAVVGSPDPIKGEVVLAFV 544 (626)
T ss_pred EEecCceEEc----CCceEEEEecccccccccceeecHHHHHHHHhhC-c-------chhheeeecCCCCCCCeEEEEEE
Confidence 5778877766 4557899999999999999999999999999542 1 223444432211122333 3666
Q ss_pred EEEecCCCCCCCChHHHHHHHHHHHHHHhChHHHHhhccCCccCCeEEEEeCC----CcHHHHHHHHHhcCCCCCCCCCC
Q 044130 459 EIQIVDSPALPLDHQKVLEECCIAVEEQLDYVYRRCRSHDKSVGPLEIRVVEP----GTFETLMDLLVSQGGSINQYKTP 534 (565)
Q Consensus 459 e~e~~~~~~~~~~~~~~l~~~~~~ld~~Ln~~Y~~~R~~~g~l~p~~v~~v~~----gtf~~~~~~~~~~G~~~~Q~K~P 534 (565)
-+.. ++ . ..+++.++|-.++ |...|-+.-|+..+.-+ =...+.++..+.+-.+.-|++-.
T Consensus 545 vl~~-g~----~----~~~~L~kel~~~V-------R~~igp~a~P~~I~~v~~LPkTrSGKimRr~lrki~~g~~~~d~ 608 (626)
T KOG1175|consen 545 VLKS-GS----H----DPEQLTKELVKHV-------RSVIGPYAVPRLIVFVPGLPKTRSGKIMRRALRKIASGKAVGDT 608 (626)
T ss_pred EEcC-CC----C----ChHHHHHHHHHHH-------HhhcCcccccceeEecCCCCccccchhHHHHHHHHhccCccccc
Confidence 6642 22 2 2344555666666 65555555555444332 22334555555433333388888
Q ss_pred cccCCChHHHHHHhccc
Q 044130 535 RCIKSNNAALMLLDSHV 551 (565)
Q Consensus 535 r~~~~~~~~~~~L~~~~ 551 (565)
-.+. |++.++.+.+.+
T Consensus 609 st~~-dp~v~~~~~~~~ 624 (626)
T KOG1175|consen 609 STLA-DPSVIDHLRSIL 624 (626)
T ss_pred cccC-ChHHHHHHHHhh
Confidence 8888 999999888753
No 98
>PRK07008 long-chain-fatty-acid--CoA ligase; Validated
Probab=97.40 E-value=0.001 Score=74.12 Aligned_cols=58 Identities=14% Similarity=0.168 Sum_probs=46.8
Q ss_pred CeEEEEeccc---ccee----------eeecCCEEEEeeeeCCCCEEEEEeecCceeeeeecccCHHHHHHHHHH
Q 044130 365 HYYELVVTTF---AGLN----------RYRIGDVLQVTGFYNRAPQFRFICRRNVVLSIDNDKTNEEDLHKSVTI 426 (565)
Q Consensus 365 ~~YelViTt~---~GLy----------RYriGDvV~v~gf~~~~P~i~F~gR~~~~l~i~GEkl~e~~v~~av~~ 426 (565)
+..||+++.. .|.| -|++||+++... ++ .+.|+||.++++++.|+|++..+|+.++..
T Consensus 383 ~~Gei~v~g~~~~~gy~~~~~~~~~~g~~~TGD~~~~~~--dg--~l~~~GR~~d~i~~~G~~v~p~eIE~~l~~ 453 (539)
T PRK07008 383 AFGDLQVRGPWVIDRYFRGDASPLVDGWFPTGDVATIDA--DG--FMQITDRSKDVIKSGGEWISSIDIENVAVA 453 (539)
T ss_pred cceEEEEeCCccchhhcCChhhhhcCCCcccCceEEEcC--CC--cEEEeecccCEEEeCCeEEcHHHHHHHHHh
Confidence 4568888863 2322 289999999864 33 689999999999999999999999999865
No 99
>TIGR02262 benz_CoA_lig benzoate-CoA ligase family. Characterized members of this protein family include benzoate-CoA ligase, 4-hydroxybenzoate-CoA ligase, 2-aminobenzoate-CoA ligase, etc. Members are related to fatty acid and acetate CoA ligases.
Probab=97.38 E-value=0.0012 Score=72.76 Aligned_cols=128 Identities=12% Similarity=0.080 Sum_probs=80.0
Q ss_pred EEEEEecch---hhhHHHHHHhcCCCCceecccccccceeeeecCCCCCC--CCCceeeecCCceeEEeeeCCCCCCccc
Q 044130 266 IEAVVTGSM---AQYIPSLEYYSAGKLPLVGTMYASSECYFGVNLKPLSN--PADVSFTLLPNMCYFEFLPLGGENGTLL 340 (565)
Q Consensus 266 i~~~~~G~~---~~y~~~l~~~~g~~~~~~~~~y~aSEg~~gi~~~~~~~--~~~~~~~l~p~~~ffEFip~~~~~~~~~ 340 (565)
+..++.||. ....+.+++.+| ++++ ..||+||...........+ ....+. .+++ .-++.++ ++
T Consensus 280 l~~~~~~G~~l~~~~~~~~~~~~~--~~v~-~~YG~tE~~~~~~~~~~~~~~~~~~G~-~~~g-~~v~i~d-~~------ 347 (508)
T TIGR02262 280 LRLCTSAGEALPAEVGQRWQARFG--VDIV-DGIGSTEMLHIFLSNLPGDVRYGTSGK-PVPG-YRLRLVG-DG------ 347 (508)
T ss_pred ceeEEEcCCCCCHHHHHHHHHHhC--Cchh-hCccccccCceeecCCccCCCCCCcCC-CCCC-cEEEEEC-CC------
Confidence 444555552 234466666675 7777 9999999742111111110 111111 1222 2245554 21
Q ss_pred cccccccccCCCCceeeccCcccCCeEEEEecccc---cee-------------eeecCCEEEEeeeeCCCCEEEEEeec
Q 044130 341 SMEFNEEEEVPNDKLVDLGHVRVGHYYELVVTTFA---GLN-------------RYRIGDVLQVTGFYNRAPQFRFICRR 404 (565)
Q Consensus 341 ~~~~~~~~~~~~~~~v~l~eve~G~~YelViTt~~---GLy-------------RYriGDvV~v~gf~~~~P~i~F~gR~ 404 (565)
..+ +..|+.+||+|+... |.| .|++||+.+... .-.+.|+||.
T Consensus 348 ------------~~~-----~~~g~~Gel~i~~~~~~~gY~~~~~~~~~~~~~~~~~TGD~~~~~~----~g~~~~~gR~ 406 (508)
T TIGR02262 348 ------------GQD-----VAAGEPGELLISGPSSATMYWNNRAKTRDTFQGEWTRSGDKYVRND----DGSYTYAGRT 406 (508)
T ss_pred ------------CCC-----CCCCCeeEEEEecCccccccCCCHHHhHhhhhcCceeccceEEEcC----CccEEEeccc
Confidence 222 447889999998753 332 479999877742 3368999999
Q ss_pred CceeeeeecccCHHHHHHHHHH
Q 044130 405 NVVLSIDNDKTNEEDLHKSVTI 426 (565)
Q Consensus 405 ~~~l~i~GEkl~e~~v~~av~~ 426 (565)
++++.+.|++++..+|+.++.+
T Consensus 407 ~d~i~~~G~~v~~~~ie~~l~~ 428 (508)
T TIGR02262 407 DDMLKVSGIYVSPFEIESALIQ 428 (508)
T ss_pred cceeeeCCEEECHHHHHHHHHh
Confidence 9999999999999999999965
No 100
>PRK12467 peptide synthase; Provisional
Probab=97.38 E-value=0.0018 Score=88.08 Aligned_cols=128 Identities=20% Similarity=0.275 Sum_probs=81.9
Q ss_pred EEEEecch---hhhHHHHHHhcCCCCceecccccccceeeeecCCCCCCCC------CceeeecCCceeEEeeeCCCCCC
Q 044130 267 EAVVTGSM---AQYIPSLEYYSAGKLPLVGTMYASSECYFGVNLKPLSNPA------DVSFTLLPNMCYFEFLPLGGENG 337 (565)
Q Consensus 267 ~~~~~G~~---~~y~~~l~~~~g~~~~~~~~~y~aSEg~~gi~~~~~~~~~------~~~~~l~p~~~ffEFip~~~~~~ 337 (565)
..+++||. ..-..++.+.+++ ++++ ..||.||+.+.+......... ..|. .+|+.. +..++.+
T Consensus 774 r~i~~gGe~l~~~~~~~~~~~~~~-~~l~-n~YG~TE~~~~~~~~~~~~~~~~~~~~~iG~-p~~~~~-~~i~d~~---- 845 (3956)
T PRK12467 774 RALVCGGEALQVDLLARVRALGPG-ARLI-NHYGPTETTVGVSTYELSDEERDFGNVPIGQ-PLANLG-LYILDHY---- 845 (3956)
T ss_pred cEEEEEeecCCHHHHHHHHHhCCC-CEEE-eCcCCChhhhheeeEecccccccCCCCcccC-CcCCCE-EEEECCC----
Confidence 56666662 2445566666655 8898 999999986532221110000 0111 123322 1222211
Q ss_pred ccccccccccccCCCCceeeccCcccCCeEEEEeccc---ccee---------------------eeecCCEEEEeeeeC
Q 044130 338 TLLSMEFNEEEEVPNDKLVDLGHVRVGHYYELVVTTF---AGLN---------------------RYRIGDVLQVTGFYN 393 (565)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~v~l~eve~G~~YelViTt~---~GLy---------------------RYriGDvV~v~gf~~ 393 (565)
.++ |.+|+.+||+|+.. .|.| -|||||+++...
T Consensus 846 ---------------~~~-----vp~G~~GEL~i~G~~v~~GYl~~p~~T~~~F~~~p~~~~g~r~yrTGDl~~~~~--- 902 (3956)
T PRK12467 846 ---------------LNP-----VPVGVVGELYIGGAGLARGYHRRPALTAERFVPDPFGADGGRLYRTGDLARYRA--- 902 (3956)
T ss_pred ---------------CCC-----CCCCCceEEEecccccchhhcCCccccHhhCcCCCCCCCCceeEecCceeEEcC---
Confidence 122 45899999999754 2332 399999999863
Q ss_pred CCCEEEEEeecCceeeeeecccCHHHHHHHHHH
Q 044130 394 RAPQFRFICRRNVVLSIDNDKTNEEDLHKSVTI 426 (565)
Q Consensus 394 ~~P~i~F~gR~~~~l~i~GEkl~e~~v~~av~~ 426 (565)
--.++|+||.++++.++|+++...+|+.++.+
T Consensus 903 -dG~l~~~GR~d~~vki~G~rI~~~eIE~~L~~ 934 (3956)
T PRK12467 903 -DGVIEYLGRMDHQVKIRGFRIELGEIEARLLA 934 (3956)
T ss_pred -CCcEEEeccccCeEEECCEecCHHHHHHHHHh
Confidence 23699999999999999999999999999975
No 101
>PRK06188 acyl-CoA synthetase; Validated
Probab=97.37 E-value=0.0011 Score=73.19 Aligned_cols=62 Identities=15% Similarity=0.146 Sum_probs=51.2
Q ss_pred cccCCeEEEEeccc---ccee-------------eeecCCEEEEeeeeCCCCEEEEEeecCceeeeeecccCHHHHHHHH
Q 044130 361 VRVGHYYELVVTTF---AGLN-------------RYRIGDVLQVTGFYNRAPQFRFICRRNVVLSIDNDKTNEEDLHKSV 424 (565)
Q Consensus 361 ve~G~~YelViTt~---~GLy-------------RYriGDvV~v~gf~~~~P~i~F~gR~~~~l~i~GEkl~e~~v~~av 424 (565)
+..|+..||+|++. .|.| .|++||+.+... .-.+.|+||.++++++.|+++...+|+.++
T Consensus 360 ~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGDl~~~~~----~g~~~~~GR~~~~i~~~G~~i~~~~IE~~l 435 (524)
T PRK06188 360 VAQGEVGEICVRGPLVMDGYWNRPEETAEAFRDGWLHTGDVAREDE----DGFYYIVDRKKDMIVTGGFNVFPREVEDVL 435 (524)
T ss_pred CCCCCeeEEEEECcchhhhhcCChHHhhhhhcCCceeecceEEEcC----CccEEEEeccccceecCCEEECHHHHHHHH
Confidence 56889999999874 2322 499999988863 236889999999999999999999999988
Q ss_pred HH
Q 044130 425 TI 426 (565)
Q Consensus 425 ~~ 426 (565)
..
T Consensus 436 ~~ 437 (524)
T PRK06188 436 AE 437 (524)
T ss_pred Hh
Confidence 65
No 102
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=97.35 E-value=0.0016 Score=79.26 Aligned_cols=45 Identities=11% Similarity=0.150 Sum_probs=39.9
Q ss_pred eeecCCEEEEeeeeCCCCEEEEEeecCceeeeeecccCHHHHHHHHHHH
Q 044130 379 RYRIGDVLQVTGFYNRAPQFRFICRRNVVLSIDNDKTNEEDLHKSVTIA 427 (565)
Q Consensus 379 RYriGDvV~v~gf~~~~P~i~F~gR~~~~l~i~GEkl~e~~v~~av~~~ 427 (565)
+|++||++++.. --.+.|+||.++++.+.|++++..+|++++.+.
T Consensus 1011 ~~~TGDl~~~d~----dG~l~~~GR~~d~i~~~G~~v~~~eIE~~l~~~ 1055 (1140)
T PRK06814 1011 WYDTGDIVTIDE----EGFITIKGRAKRFAKIAGEMISLAAVEELAAEL 1055 (1140)
T ss_pred eEecCCEEEECC----CCeEEEEecccCeeeeCCEEECHHHHHHHHHhc
Confidence 699999999863 347899999999999999999999999998763
No 103
>PRK12467 peptide synthase; Provisional
Probab=97.33 E-value=0.0012 Score=89.73 Aligned_cols=129 Identities=17% Similarity=0.215 Sum_probs=83.2
Q ss_pred EEEEEecch---hhhHHHHHHhcCCCCceecccccccceeeeecCCCCCCC-------CCceeeecCCceeEEeeeCCCC
Q 044130 266 IEAVVTGSM---AQYIPSLEYYSAGKLPLVGTMYASSECYFGVNLKPLSNP-------ADVSFTLLPNMCYFEFLPLGGE 335 (565)
Q Consensus 266 i~~~~~G~~---~~y~~~l~~~~g~~~~~~~~~y~aSEg~~gi~~~~~~~~-------~~~~~~l~p~~~ffEFip~~~~ 335 (565)
+..+++||- ..-..++++.+++ +.++ ..||.||+.+.......... ...|. .+|+...+ | .++
T Consensus 3353 lr~~~~gGe~~~~~~~~~~~~~~~~-~~l~-n~YG~TE~~~~~~~~~~~~~~~~~~~~~~iG~-p~~~~~~~--v-~d~- 3425 (3956)
T PRK12467 3353 LDIYVFGGEAVPPAAFEQVKRKLKP-RGLT-NGYGPTEAVVTVTLWKCGGDAVCEAPYAPIGR-PVAGRSIY--V-LDG- 3425 (3956)
T ss_pred ceEEEEecCCCCHHHHHHHHHhCCC-CEEE-eCcccchhEeeeEEEecccccccCCCCCCCcc-ccCCCEEE--E-ECC-
Confidence 566777773 2344556666666 8888 99999998654322111000 00111 12222111 1 111
Q ss_pred CCccccccccccccCCCCceeeccCcccCCeEEEEeccc---cceee---------------------eecCCEEEEeee
Q 044130 336 NGTLLSMEFNEEEEVPNDKLVDLGHVRVGHYYELVVTTF---AGLNR---------------------YRIGDVLQVTGF 391 (565)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~v~l~eve~G~~YelViTt~---~GLyR---------------------YriGDvV~v~gf 391 (565)
+.++ |.+|+.+||.|... .|.|. |||||++++..
T Consensus 3426 ----------------~~~~-----vp~G~~GEL~i~G~~v~~GY~~~~~~T~~~F~~~p~~~~g~r~yrTGDl~~~~~- 3483 (3956)
T PRK12467 3426 ----------------QLNP-----VPVGVAGELYIGGVGLARGYHQRPSLTAERFVADPFSGSGGRLYRTGDLARYRA- 3483 (3956)
T ss_pred ----------------CCCC-----CCCCCCceEEEcchhhhhhccCCcccchhhccCCCCCCCCceeeccchhheecC-
Confidence 1223 45899999999764 34331 99999999864
Q ss_pred eCCCCEEEEEeecCceeeeeecccCHHHHHHHHHH
Q 044130 392 YNRAPQFRFICRRNVVLSIDNDKTNEEDLHKSVTI 426 (565)
Q Consensus 392 ~~~~P~i~F~gR~~~~l~i~GEkl~e~~v~~av~~ 426 (565)
--.++|+||.++++.++|.++...+|+.++.+
T Consensus 3484 ---dG~l~~~GR~d~~iki~G~rIe~~EIE~~l~~ 3515 (3956)
T PRK12467 3484 ---DGVIEYLGRIDHQVKIRGFRIELGEIEARLLQ 3515 (3956)
T ss_pred ---CCcEEEeccccceEeeceEeecHHHHHHHHhh
Confidence 23799999999999999999999999999976
No 104
>PLN02430 long-chain-fatty-acid-CoA ligase
Probab=97.32 E-value=0.0017 Score=74.63 Aligned_cols=60 Identities=17% Similarity=0.207 Sum_probs=47.9
Q ss_pred cCCeEEEEeccc---ccee-------------eeecCCEEEEeeeeCCCCEEEEEeecCceeee-eecccCHHHHHHHHH
Q 044130 363 VGHYYELVVTTF---AGLN-------------RYRIGDVLQVTGFYNRAPQFRFICRRNVVLSI-DNDKTNEEDLHKSVT 425 (565)
Q Consensus 363 ~G~~YelViTt~---~GLy-------------RYriGDvV~v~gf~~~~P~i~F~gR~~~~l~i-~GEkl~e~~v~~av~ 425 (565)
.|...||+|... .|.| .|+|||+.++.. + -.+.|+||.++++.+ .||++++.+|+.++.
T Consensus 462 ~~~~GEi~vrg~~v~~GY~~~~e~t~~~~~dGw~~TGDig~~d~--d--G~l~i~gR~kd~ik~~~G~~V~p~~IE~~l~ 537 (660)
T PLN02430 462 EPPRGEICVRGKCLFSGYYKNPELTEEVMKDGWFHTGDIGEILP--N--GVLKIIDRKKNLIKLSQGEYVALEYLENVYG 537 (660)
T ss_pred CCCcceEEecCCCccccccCChHHhhhhhhccceeccceEEECC--C--CcEEEEEcccccEEcCCCcEEchHHHHHHHh
Confidence 455789999763 4554 389999999863 2 268999999999997 599999999999885
Q ss_pred H
Q 044130 426 I 426 (565)
Q Consensus 426 ~ 426 (565)
+
T Consensus 538 ~ 538 (660)
T PLN02430 538 Q 538 (660)
T ss_pred c
Confidence 4
No 105
>PRK05691 peptide synthase; Validated
Probab=97.31 E-value=0.0032 Score=86.46 Aligned_cols=62 Identities=19% Similarity=0.294 Sum_probs=51.4
Q ss_pred cccCCeEEEEeccc---ccee---------------------eeecCCEEEEeeeeCCCCEEEEEeecCceeeeeecccC
Q 044130 361 VRVGHYYELVVTTF---AGLN---------------------RYRIGDVLQVTGFYNRAPQFRFICRRNVVLSIDNDKTN 416 (565)
Q Consensus 361 ve~G~~YelViTt~---~GLy---------------------RYriGDvV~v~gf~~~~P~i~F~gR~~~~l~i~GEkl~ 416 (565)
|.+|..+||+|... .|.+ -|||||+++... ++ .|+|+||.|+.+.++|.++.
T Consensus 4061 ~p~g~~GEL~i~G~~v~~GY~~~~~~t~~~f~~~p~~~~~~~~yrTGDl~~~~~--dG--~l~~~GR~d~qvki~G~rie 4136 (4334)
T PRK05691 4061 VPLGAVGELCVAGTGVGRGYVGDPLRTALAFVPHPFGAPGERLYRTGDLARRRS--DG--VLEYVGRIDHQVKIRGYRIE 4136 (4334)
T ss_pred CCCCCceEEEEecccccccccCCcccchhhcccCCCCCCCceeeccCcceeecC--CC--cEEEecccCCcEEeceEEec
Confidence 44899999999763 2322 299999999974 23 69999999999999999999
Q ss_pred HHHHHHHHHH
Q 044130 417 EEDLHKSVTI 426 (565)
Q Consensus 417 e~~v~~av~~ 426 (565)
..+|+.++..
T Consensus 4137 l~eIE~~l~~ 4146 (4334)
T PRK05691 4137 LGEIEARLHE 4146 (4334)
T ss_pred HHHHHHHHHh
Confidence 9999999865
No 106
>PRK05851 long-chain-fatty-acid--[acyl-carrier-protein] ligase; Validated
Probab=97.28 E-value=0.0015 Score=72.66 Aligned_cols=62 Identities=10% Similarity=0.141 Sum_probs=51.7
Q ss_pred cccCCeEEEEeccc---ccee---------eeecCCEEEEeeeeCCCCEEEEEeecCceeeeeecccCHHHHHHHHHHH
Q 044130 361 VRVGHYYELVVTTF---AGLN---------RYRIGDVLQVTGFYNRAPQFRFICRRNVVLSIDNDKTNEEDLHKSVTIA 427 (565)
Q Consensus 361 ve~G~~YelViTt~---~GLy---------RYriGDvV~v~gf~~~~P~i~F~gR~~~~l~i~GEkl~e~~v~~av~~~ 427 (565)
+..|+..||+|+.. .|.| -|++||+++.. .+ .+.|+||.++++.+.|++++..+|+.++.+.
T Consensus 367 ~~~g~~GEl~v~g~~~~~GY~~~~~~~~~~~~~TGDl~~~~---~G--~l~~~GR~dd~i~~~G~~v~p~eIE~~l~~~ 440 (525)
T PRK05851 367 VAGREIGEIEIRGASMMSGYLGQAPIDPDDWFPTGDLGYLV---DG--GLVVCGRAKELITVAGRNIFPTEIERVAAQV 440 (525)
T ss_pred CCCCCeEEEEEecCchhhccccCCccCCCCceeccceEEEE---CC--EEEEEeecCCEEEECCEEeCHHHHHHHHHhC
Confidence 66899999999764 3443 38999999763 22 6899999999999999999999999999763
No 107
>PRK05620 long-chain-fatty-acid--CoA ligase; Validated
Probab=97.28 E-value=0.0016 Score=73.13 Aligned_cols=43 Identities=21% Similarity=0.172 Sum_probs=38.3
Q ss_pred eecCCEEEEeeeeCCCCEEEEEeecCceeeeeecccCHHHHHHHHHH
Q 044130 380 YRIGDVLQVTGFYNRAPQFRFICRRNVVLSIDNDKTNEEDLHKSVTI 426 (565)
Q Consensus 380 YriGDvV~v~gf~~~~P~i~F~gR~~~~l~i~GEkl~e~~v~~av~~ 426 (565)
|++||++++.. --.+.|+||.++++.+.|+++...+|+.++..
T Consensus 432 ~~TGD~~~~~~----dg~l~~~GR~~d~i~~~G~~i~~~eIE~~l~~ 474 (576)
T PRK05620 432 LRTGDVGSVTR----DGFLTIHDRARDVIRSGGEWIYSAQLENYIMA 474 (576)
T ss_pred EecCceEEEcC----CceEEEEechhhhhhcCCEEEcHHHHHHHHhc
Confidence 89999998764 23799999999999999999999999999965
No 108
>PF00501 AMP-binding: AMP-binding enzyme; InterPro: IPR000873 A number of prokaryotic and eukaryotic enzymes, which appear to act via an ATP-dependent covalent binding of AMP to their substrate, share a region of sequence similarity [, , ]. This region is a Ser/Thr/Gly-rich domain that is further characterised by a conserved Pro-Lys-Gly triplet. The family of enzymes includes luciferase, long chain fatty acid Co-A ligase, acetyl-CoA synthetase and various other closely-related synthetases.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2V7B_A 2Y4O_B 2VSQ_A 3L8C_B 1RY2_A 3KXW_A 3LNV_A 3ETC_B 3A9U_A 3A9V_A ....
Probab=97.26 E-value=0.0016 Score=69.43 Aligned_cols=120 Identities=16% Similarity=0.211 Sum_probs=77.3
Q ss_pred cCCCCceEEEEEecc--hhhhHHHHHHhcCCCCceecccccccceee-eecCC-CC--CCCCCceeeecCCceeEEeeeC
Q 044130 259 LWPRAKYIEAVVTGS--MAQYIPSLEYYSAGKLPLVGTMYASSECYF-GVNLK-PL--SNPADVSFTLLPNMCYFEFLPL 332 (565)
Q Consensus 259 lWP~l~~i~~~~~G~--~~~y~~~l~~~~g~~~~~~~~~y~aSEg~~-gi~~~-~~--~~~~~~~~~l~p~~~ffEFip~ 332 (565)
-+++++.+.+ +|+ .....+++++.++. ++++ ..||+||+.. +.... .. ..++..+ ..+| ..-.+.++.
T Consensus 275 ~l~~lr~v~~--~G~~l~~~~~~~~~~~~~~-~~i~-~~YG~tE~~~~~~~~~~~~~~~~~~~~G-~~~~-~~~~~ivd~ 348 (417)
T PF00501_consen 275 DLSSLRTVIS--GGEPLPPDLLRRLRKAFGN-APII-NLYGSTETGSIATIRPPEDDIEKPGSVG-KPLP-GVEVKIVDP 348 (417)
T ss_dssp TGTT-SEEEE--ESST-CHHHHHHHHHHHTT-SEEE-EEEEEGGGSSEEEEEETTTHHSSTTSEB-EEST-TEEEEEECT
T ss_pred cccccccccc--ccccCChhhcccccccccc-ccce-ecccccccceeeeccccccccccccccc-cccc-ccccccccc
Confidence 3556554433 333 34677888898886 6888 9999999953 33111 11 1122233 3345 345677765
Q ss_pred CCCCCccccccccccccCCCCceeeccCcccCCeEEEEeccc---ccee--------------eeecCCEEEEeeeeCCC
Q 044130 333 GGENGTLLSMEFNEEEEVPNDKLVDLGHVRVGHYYELVVTTF---AGLN--------------RYRIGDVLQVTGFYNRA 395 (565)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~v~l~eve~G~~YelViTt~---~GLy--------------RYriGDvV~v~gf~~~~ 395 (565)
++ .+++ ..|+.+||+|+.. .|.| -|++||++++.. -
T Consensus 349 ~~------------------~~~~-----~~g~~Gei~i~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~g~~d~----~ 401 (417)
T PF00501_consen 349 NT------------------GEPL-----PPGEPGEIVIRGPNVFSGYYNDPELTAEAFIDDGWYRTGDLGRLDE----D 401 (417)
T ss_dssp TT------------------SSBE-----STTSEEEEEEESTTSBSEETTBHHHHHHHEETTSEEEEEEEEEEET----T
T ss_pred cc------------------cccc-----cccccccccccCCccceeeeccccccccccccccceecceEEEECC----C
Confidence 43 2233 5999999999964 3433 399999999972 2
Q ss_pred CEEEEEeecCceeeee
Q 044130 396 PQFRFICRRNVVLSID 411 (565)
Q Consensus 396 P~i~F~gR~~~~l~i~ 411 (565)
-.|.++||.+++++++
T Consensus 402 G~~~~~GR~~~~i~~~ 417 (417)
T PF00501_consen 402 GYLYILGRSDDMIKVR 417 (417)
T ss_dssp SEEEEEEEGSCEEEET
T ss_pred CeEEEEEeeCCEEEeC
Confidence 4999999999999863
No 109
>PRK05691 peptide synthase; Validated
Probab=97.22 E-value=0.0045 Score=85.01 Aligned_cols=129 Identities=15% Similarity=0.177 Sum_probs=82.9
Q ss_pred EEEEEecch---hhhHHHHHHhcCCCCceecccccccceeeeecCCC----CCCCCCceeeecCCceeEEeeeCCCCCCc
Q 044130 266 IEAVVTGSM---AQYIPSLEYYSAGKLPLVGTMYASSECYFGVNLKP----LSNPADVSFTLLPNMCYFEFLPLGGENGT 338 (565)
Q Consensus 266 i~~~~~G~~---~~y~~~l~~~~g~~~~~~~~~y~aSEg~~gi~~~~----~~~~~~~~~~l~p~~~ffEFip~~~~~~~ 338 (565)
+..++.||. ....+++.+.+++ ++++ ..||.||+.+...... .......|.. +++.. ...++.+
T Consensus 1390 lr~~~~gGe~l~~~~~~~~~~~~~~-~~l~-n~YG~TE~~~~~~~~~~~~~~~~~~~iG~p-~~~~~-~~i~d~~----- 1460 (4334)
T PRK05691 1390 LRRLFSGGEALPAELRNRVLQRLPQ-VQLH-NRYGPTETAINVTHWQCQAEDGERSPIGRP-LGNVL-CRVLDAE----- 1460 (4334)
T ss_pred ccEEEEeecCCCHHHHHHHHHhCCC-cEEE-eCCCcChheeeeeeeecccccCCCCcccce-eCCCE-EEEECCC-----
Confidence 556666762 3445666666776 8888 9999999865432211 0001111221 22221 2222211
Q ss_pred cccccccccccCCCCceeeccCcccCCeEEEEeccc---cce---------------------eeeecCCEEEEeeeeCC
Q 044130 339 LLSMEFNEEEEVPNDKLVDLGHVRVGHYYELVVTTF---AGL---------------------NRYRIGDVLQVTGFYNR 394 (565)
Q Consensus 339 ~~~~~~~~~~~~~~~~~v~l~eve~G~~YelViTt~---~GL---------------------yRYriGDvV~v~gf~~~ 394 (565)
.+ .+.+|+.+||+|... .|. --||+||+++... +
T Consensus 1461 --------------~~-----~vp~G~~GEL~i~G~~v~~GYl~~p~~t~~~f~~~p~~~~~~r~yrTGDl~~~~~--d- 1518 (4334)
T PRK05691 1461 --------------LN-----LLPPGVAGELCIGGAGLARGYLGRPALTAERFVPDPLGEDGARLYRTGDRARWNA--D- 1518 (4334)
T ss_pred --------------CC-----CCCCCCceEEEecCcccchhhcCCccccHhhCCCCCCCCCCceEEEccceEEECC--C-
Confidence 12 245899999999643 121 1389999999874 2
Q ss_pred CCEEEEEeecCceeeeeecccCHHHHHHHHHH
Q 044130 395 APQFRFICRRNVVLSIDNDKTNEEDLHKSVTI 426 (565)
Q Consensus 395 ~P~i~F~gR~~~~l~i~GEkl~e~~v~~av~~ 426 (565)
-.+.|+||.++++.++|+++...+|+.++.+
T Consensus 1519 -G~l~~~GR~d~qiki~G~rie~~eIE~~l~~ 1549 (4334)
T PRK05691 1519 -GALEYLGRLDQQVKLRGFRVEPEEIQARLLA 1549 (4334)
T ss_pred -CCEEEecccCcEEEECCEEcCHHHHHHHHHh
Confidence 4799999999999999999999999999976
No 110
>PRK06087 short chain acyl-CoA synthetase; Reviewed
Probab=97.19 E-value=0.0018 Score=72.08 Aligned_cols=62 Identities=13% Similarity=0.155 Sum_probs=49.0
Q ss_pred cccCCeEEEEecccc---cee--------------eeecCCEEEEeeeeCCCCEEEEEeecCceeeeeecccCHHHHHHH
Q 044130 361 VRVGHYYELVVTTFA---GLN--------------RYRIGDVLQVTGFYNRAPQFRFICRRNVVLSIDNDKTNEEDLHKS 423 (565)
Q Consensus 361 ve~G~~YelViTt~~---GLy--------------RYriGDvV~v~gf~~~~P~i~F~gR~~~~l~i~GEkl~e~~v~~a 423 (565)
+..|+..||++.... |.| -|++||++++.. ...+.|+||.++++.+.|++++..+|+.+
T Consensus 376 ~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~g~~~TGDl~~~~~----~g~l~i~GR~~d~i~~~G~~v~p~~iE~~ 451 (547)
T PRK06087 376 LPPGCEGEEASRGPNVFMGYLDEPELTARALDEEGWYYSGDLCRMDE----AGYIKITGRKKDIIVRGGENISSREVEDI 451 (547)
T ss_pred CcCCCcceEEEecccccccccCCHHHHHHHhCCCCCcCcCceEEECC----CCCEEEEecchhhhhcCCEEECHHHHHHH
Confidence 457888888875432 111 389999999853 34688999999999999999999999999
Q ss_pred HHH
Q 044130 424 VTI 426 (565)
Q Consensus 424 v~~ 426 (565)
+..
T Consensus 452 l~~ 454 (547)
T PRK06087 452 LLQ 454 (547)
T ss_pred HHh
Confidence 965
No 111
>PRK12316 peptide synthase; Provisional
Probab=97.17 E-value=0.0013 Score=91.25 Aligned_cols=129 Identities=15% Similarity=0.169 Sum_probs=82.5
Q ss_pred EEEEEecch---hhhHHHHHHhcCCCCceecccccccceeeeecCCCC----CCCCCceeeecCCceeEEeeeCCCCCCc
Q 044130 266 IEAVVTGSM---AQYIPSLEYYSAGKLPLVGTMYASSECYFGVNLKPL----SNPADVSFTLLPNMCYFEFLPLGGENGT 338 (565)
Q Consensus 266 i~~~~~G~~---~~y~~~l~~~~g~~~~~~~~~y~aSEg~~gi~~~~~----~~~~~~~~~l~p~~~ffEFip~~~~~~~ 338 (565)
+..++.||. ....+++.+.+++ ++++ ..||.||+.+++..... ..+...|. .+|+..+ ..++.+
T Consensus 772 l~~~~~gGe~l~~~~~~~~~~~~~~-~~l~-n~YG~TE~~~~~~~~~~~~~~~~~~~iG~-p~~~~~~-~i~d~~----- 842 (5163)
T PRK12316 772 LRRIVCSGEALPADAQEQVFAKLPQ-AGLY-NLYGPTEAAIDVTHWTCVEEGGDSVPIGR-PIANLAC-YILDAN----- 842 (5163)
T ss_pred ccEEEEeeccCCHHHHHHHHHhCCC-CeEE-eCcCcChheeeeeEEecccccCCCCCCcc-ccCCCEE-EEECCC-----
Confidence 455566663 2344555555666 8888 99999999754322110 00111122 1233321 122211
Q ss_pred cccccccccccCCCCceeeccCcccCCeEEEEeccc---ccee--------------------eeecCCEEEEeeeeCCC
Q 044130 339 LLSMEFNEEEEVPNDKLVDLGHVRVGHYYELVVTTF---AGLN--------------------RYRIGDVLQVTGFYNRA 395 (565)
Q Consensus 339 ~~~~~~~~~~~~~~~~~v~l~eve~G~~YelViTt~---~GLy--------------------RYriGDvV~v~gf~~~~ 395 (565)
.++ +..|+.+||+|... .|.+ -|++||+++... +
T Consensus 843 --------------~~~-----~p~G~~GEl~i~G~~v~~GYl~~~~~t~~~f~~~~~~~~~~~y~TGDl~~~~~--d-- 899 (5163)
T PRK12316 843 --------------LEP-----VPVGVLGELYLAGRGLARGYHGRPGLTAERFVPSPFVAGERMYRTGDLARYRA--D-- 899 (5163)
T ss_pred --------------CCC-----CCCCCceEEEecccccChhhCCChhhhhhhCCCCCCCCCCeeEecCccEEECC--C--
Confidence 222 45899999999653 2322 399999999874 2
Q ss_pred CEEEEEeecCceeeeeecccCHHHHHHHHHH
Q 044130 396 PQFRFICRRNVVLSIDNDKTNEEDLHKSVTI 426 (565)
Q Consensus 396 P~i~F~gR~~~~l~i~GEkl~e~~v~~av~~ 426 (565)
-.+.|+||.++++.+.|+++...+|+.++.+
T Consensus 900 G~l~~~GR~d~~ik~~G~rI~~~EIE~~l~~ 930 (5163)
T PRK12316 900 GVIEYAGRIDHQVKLRGLRIELGEIEARLLE 930 (5163)
T ss_pred CCEEeecccCCEEEEceEEcChHHHHHHHHh
Confidence 3799999999999999999999999999976
No 112
>PRK12582 acyl-CoA synthetase; Provisional
Probab=97.16 E-value=0.0035 Score=71.39 Aligned_cols=60 Identities=22% Similarity=0.287 Sum_probs=43.2
Q ss_pred ccCCeEEEEeccc---cceee--------------eecCCEEEEeeeeCCCCEEEEEeecCceeee-eecccCHHHHH
Q 044130 362 RVGHYYELVVTTF---AGLNR--------------YRIGDVLQVTGFYNRAPQFRFICRRNVVLSI-DNDKTNEEDLH 421 (565)
Q Consensus 362 e~G~~YelViTt~---~GLyR--------------YriGDvV~v~gf~~~~P~i~F~gR~~~~l~i-~GEkl~e~~v~ 421 (565)
..|+.+||+|... .|.|. |++||+.++..-.+.--.+.|+||.++++.+ .|+|++..+++
T Consensus 419 ~~G~~GEl~vrg~~v~~GY~~~p~~t~~~f~~dgw~~TGDlg~~~d~~~~~g~l~i~GR~~d~i~~~~G~~i~p~~iE 496 (624)
T PRK12582 419 PVGDKYEVRVKGPNVTPGYHKDPELTAAAFDEEGFYRLGDAARFVDPDDPEKGLIFDGRVAEDFKLSTGTWVSVGTLR 496 (624)
T ss_pred cCCCceEEEEECCcccccccCCccchhhhcCccCCccccceEEecCCcCCCCceEEeccchhhEecCCCcEechHHHH
Confidence 3577888888552 45442 9999999985311112368899999999986 59999988775
No 113
>PRK06018 putative acyl-CoA synthetase; Provisional
Probab=97.13 E-value=0.0027 Score=70.69 Aligned_cols=58 Identities=21% Similarity=0.208 Sum_probs=45.9
Q ss_pred CeEEEEeccc---cceee-----------eecCCEEEEeeeeCCCCEEEEEeecCceeeeeecccCHHHHHHHHHH
Q 044130 365 HYYELVVTTF---AGLNR-----------YRIGDVLQVTGFYNRAPQFRFICRRNVVLSIDNDKTNEEDLHKSVTI 426 (565)
Q Consensus 365 ~~YelViTt~---~GLyR-----------YriGDvV~v~gf~~~~P~i~F~gR~~~~l~i~GEkl~e~~v~~av~~ 426 (565)
...||++... .|.|. |++||++++.. + -.+.|+||.++++++.|+|++..+|+.++..
T Consensus 383 ~~Gel~i~g~~~~~gy~~~~~~~~~~~~~~~TGDl~~~~~--~--g~~~~~GR~~d~i~~~G~~v~~~eIE~~l~~ 454 (542)
T PRK06018 383 TFGRLKVRGPAVAAAYYRVDGEILDDDGFFDTGDVATIDA--Y--GYMRITDRSKDVIKSGGEWISSIDLENLAVG 454 (542)
T ss_pred ceeEEEEecCCcchhhhcCcccEecCCcEEEcCCEEEEcC--C--ccEEEEecCCCeEEECCEEECHHHHHHHHHh
Confidence 4578888532 24443 99999988753 2 2689999999999999999999999998865
No 114
>TIGR01923 menE O-succinylbenzoate-CoA ligase. This model represents an enzyme, O-succinylbenzoate-CoA ligase, which is involved in the fourth step of the menaquinone biosynthesis pathway. O-succinylbenzoate-CoA ligase, together with menB - naphtoate synthase, take 2-succinylbenzoate and convert it into 1,4-di-hydroxy-2- naphtoate.
Probab=97.11 E-value=0.0026 Score=68.27 Aligned_cols=58 Identities=16% Similarity=0.240 Sum_probs=48.2
Q ss_pred CeEEEEeccc---cceee-------------eecCCEEEEeeeeCCCCEEEEEeecCceeeeeecccCHHHHHHHHHH
Q 044130 365 HYYELVVTTF---AGLNR-------------YRIGDVLQVTGFYNRAPQFRFICRRNVVLSIDNDKTNEEDLHKSVTI 426 (565)
Q Consensus 365 ~~YelViTt~---~GLyR-------------YriGDvV~v~gf~~~~P~i~F~gR~~~~l~i~GEkl~e~~v~~av~~ 426 (565)
+..||+|++. .|.|+ |++||++++.+ ...+.|+||.++++.+.|++++..+|+.++..
T Consensus 291 ~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~TGD~~~~~~----dg~~~~~GR~~d~i~~~G~~v~~~~iE~~l~~ 364 (436)
T TIGR01923 291 GHGEIMVKGANLMKGYLYQGELTPAFEQQGWFNTGDIGELDG----EGFLYVLGRRDDLIISGGENIYPEEIETVLYQ 364 (436)
T ss_pred CceEEEEECCccchhhCCChhhhhhhhcCCCeeccceEEEcC----CCCEEEeccccCeEEeCCEeeCHHHHHHHHHh
Confidence 5678999875 23333 89999999875 24789999999999999999999999999965
No 115
>COG1021 EntE Peptide arylation enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.10 E-value=0.00091 Score=70.89 Aligned_cols=128 Identities=17% Similarity=0.188 Sum_probs=86.8
Q ss_pred EEEEEecc---hhhhHHHHHHhcCCCCceecccccccceeeeecCCCCCCCC----CceeeecCCceeEEeeeCCCCCCc
Q 044130 266 IEAVVTGS---MAQYIPSLEYYSAGKLPLVGTMYASSECYFGVNLKPLSNPA----DVSFTLLPNMCYFEFLPLGGENGT 338 (565)
Q Consensus 266 i~~~~~G~---~~~y~~~l~~~~g~~~~~~~~~y~aSEg~~gi~~~~~~~~~----~~~~~l~p~~~ffEFip~~~~~~~ 338 (565)
+..+-.|| ...-..++...+| +.++ -.+|-.||.+-+-- -+.|++ ..|..+.|+. |.--+++
T Consensus 307 LrllQVGGarl~~~~Arrv~~~lg--C~LQ-QVFGMAEGLvnyTR-LDDp~E~i~~TQGrPlsP~D---EvrvvD~---- 375 (542)
T COG1021 307 LRLLQVGGARLSATLARRVPAVLG--CQLQ-QVFGMAEGLVNYTR-LDDPPEIIIHTQGRPLSPDD---EVRVVDA---- 375 (542)
T ss_pred eeEEeecCcccCHHHHhhchhhhC--chHH-HHhhhhhhhhcccc-cCCchHheeecCCCcCCCcc---eeEEecC----
Confidence 44455566 2356677888887 6676 88899999764321 111111 2244444422 2222222
Q ss_pred cccccccccccCCCCceeeccCcccCCeEEEEec---cccceee--------------eecCCEEEEeeeeCCCCEEEEE
Q 044130 339 LLSMEFNEEEEVPNDKLVDLGHVRVGHYYELVVT---TFAGLNR--------------YRIGDVLQVTGFYNRAPQFRFI 401 (565)
Q Consensus 339 ~~~~~~~~~~~~~~~~~v~l~eve~G~~YelViT---t~~GLyR--------------YriGDvV~v~gf~~~~P~i~F~ 401 (565)
++++ |.+|+..+|..- |+.|.|| ||+||+|+.+. ---+...
T Consensus 376 -------------dg~p-----v~pGE~G~LltRGPYTirGYyrap~HNa~aF~a~GFYrsGD~V~~~~----dGyl~V~ 433 (542)
T COG1021 376 -------------DGNP-----VAPGEVGELLTRGPYTIRGYYRAPEHNARAFDADGFYRSGDLVRRDP----DGYLVVE 433 (542)
T ss_pred -------------CCCC-----CCCCCcceeeecCCeeeeeeccCchhhhhccCcCCceecCceeEecC----CceEEEE
Confidence 1233 559999999873 5688998 99999999984 3367899
Q ss_pred eecCceeeeeecccCHHHHHHHHHH
Q 044130 402 CRRNVVLSIDNDKTNEEDLHKSVTI 426 (565)
Q Consensus 402 gR~~~~l~i~GEkl~e~~v~~av~~ 426 (565)
||.++.+|-.|||+--++|++.+..
T Consensus 434 GR~KDQINRgGEKIAAeEvEn~LL~ 458 (542)
T COG1021 434 GRVKDQINRGGEKIAAEEVENLLLR 458 (542)
T ss_pred eeehhhhccccchhhHHHHHHHHhh
Confidence 9999999999999999999998855
No 116
>PRK12316 peptide synthase; Provisional
Probab=97.04 E-value=0.0028 Score=88.00 Aligned_cols=129 Identities=20% Similarity=0.223 Sum_probs=81.9
Q ss_pred EEEEEecchhhhHHHHHHhcCCCCceecccccccceeeeecCCC----CCCCCCceeeecCCceeEEeeeCCCCCCcccc
Q 044130 266 IEAVVTGSMAQYIPSLEYYSAGKLPLVGTMYASSECYFGVNLKP----LSNPADVSFTLLPNMCYFEFLPLGGENGTLLS 341 (565)
Q Consensus 266 i~~~~~G~~~~y~~~l~~~~g~~~~~~~~~y~aSEg~~gi~~~~----~~~~~~~~~~l~p~~~ffEFip~~~~~~~~~~ 341 (565)
+..++.||-......++.+..+ ++++ .+||.||+.+..-... .......|-. +++.. ...++.+
T Consensus 3313 lr~~~~gGe~l~~~~~~~~~~~-~~l~-n~YG~TE~~~~~~~~~~~~~~~~~~~iG~p-~~~~~-~~i~d~~-------- 3380 (5163)
T PRK12316 3313 LKRIVCGGEALPADLQQQVFAG-LPLY-NLYGPTEATITVTHWQCVEEGKDAVPIGRP-IANRA-CYILDGS-------- 3380 (5163)
T ss_pred ceEEEEccccCCHHHHHHHHhC-CcEe-eccCCCccEeeEeEEeccCCCCCCCcccee-cCCCE-EEEECCC--------
Confidence 6667777744333444444444 8888 9999999976432211 1111112222 23322 1222211
Q ss_pred ccccccccCCCCceeeccCcccCCeEEEEeccc---ccee--------------------eeecCCEEEEeeeeCCCCEE
Q 044130 342 MEFNEEEEVPNDKLVDLGHVRVGHYYELVVTTF---AGLN--------------------RYRIGDVLQVTGFYNRAPQF 398 (565)
Q Consensus 342 ~~~~~~~~~~~~~~v~l~eve~G~~YelViTt~---~GLy--------------------RYriGDvV~v~gf~~~~P~i 398 (565)
.++ +.+|..+||+|... .|.+ -|+|||+++... --.+
T Consensus 3381 -----------~~~-----~p~G~~GEl~i~G~~v~~GY~~~~~~t~~~f~~~p~~~~~~~y~TGDl~~~~~----dG~l 3440 (5163)
T PRK12316 3381 -----------LEP-----VPVGALGELYLGGEGLARGYHNRPGLTAERFVPDPFVPGERLYRTGDLARYRA----DGVI 3440 (5163)
T ss_pred -----------CCC-----CCCCCCceEEecccccchhcCCChhhchhhCCCCCCCCCCeeEecCceEEECC----CCCE
Confidence 223 44899999999653 2322 299999999863 2379
Q ss_pred EEEeecCceeeeeecccCHHHHHHHHHH
Q 044130 399 RFICRRNVVLSIDNDKTNEEDLHKSVTI 426 (565)
Q Consensus 399 ~F~gR~~~~l~i~GEkl~e~~v~~av~~ 426 (565)
+|+||.++++.++|.++...+|+.++..
T Consensus 3441 ~~~GR~d~qvKi~G~rIel~eIE~~l~~ 3468 (5163)
T PRK12316 3441 EYIGRVDHQVKIRGFRIELGEIEARLLE 3468 (5163)
T ss_pred EEecccCCeEeeCcEeeChHHHHHHHHh
Confidence 9999999999999999999999999976
No 117
>COG1022 FAA1 Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism]
Probab=96.96 E-value=0.006 Score=69.36 Aligned_cols=132 Identities=17% Similarity=0.245 Sum_probs=93.9
Q ss_pred EEEEEecchh--hhHHHHHHhcCCCCceecccccccceeeeecCCCCCCCCCceeeecCCceeEEeeeCCCCCCcccccc
Q 044130 266 IEAVVTGSMA--QYIPSLEYYSAGKLPLVGTMYASSECYFGVNLKPLSNPADVSFTLLPNMCYFEFLPLGGENGTLLSME 343 (565)
Q Consensus 266 i~~~~~G~~~--~y~~~l~~~~g~~~~~~~~~y~aSEg~~gi~~~~~~~~~~~~~~l~p~~~ffEFip~~~~~~~~~~~~ 343 (565)
+...++||+. +-...+=+-.| +++. .+||-||..-++.+++. ..|.+ +
T Consensus 355 i~~~~sGGa~l~~~~~~f~~~lG--i~i~-eGYGlTEts~~~~v~~~----------------~~~~~-g---------- 404 (613)
T COG1022 355 IRYALSGGAPLSPELLHFFRSLG--IPIL-EGYGLTETSAVVSVNPP----------------DRFVL-G---------- 404 (613)
T ss_pred EEEEEecCCcCCHHHHHHHHHcC--CCeE-EEecccccccceEEccc----------------cCccc-C----------
Confidence 6777888854 33333323345 9999 99999998655544431 11222 1
Q ss_pred ccccccCCCCceeeccCcccCCeEEEEeccc---cceee--------------eecCCEEEEeeeeCCCCEEEEEeecCc
Q 044130 344 FNEEEEVPNDKLVDLGHVRVGHYYELVVTTF---AGLNR--------------YRIGDVLQVTGFYNRAPQFRFICRRNV 406 (565)
Q Consensus 344 ~~~~~~~~~~~~v~l~eve~G~~YelViTt~---~GLyR--------------YriGDvV~v~gf~~~~P~i~F~gR~~~ 406 (565)
.-+++++-.|++.+++.||.|-+. .|.|. ++|||+.+++. + -.+.++||.++
T Consensus 405 -------tvG~p~p~~evKI~d~GEilVRG~~Vm~GYyk~pe~Taeaf~~DGWf~TGDlg~~d~---~-g~L~i~gRkK~ 473 (613)
T COG1022 405 -------TVGKPLPGIEVKIADDGEILVRGPNVMKGYYKNPEATAEAFTEDGWFRTGDLGELDE---D-GYLVITGRKKE 473 (613)
T ss_pred -------CcCCcCCCceEEEccCceEEEecchhcchhcCChHHHhhhccccCCcccCceeEEcC---C-CcEEEeecccc
Confidence 126788889999999999999774 67765 78999999985 3 68999999999
Q ss_pred eeee-eecccCHHHHHHHHHHHHhhcccCCCeEEeEEEeec
Q 044130 407 VLSI-DNDKTNEEDLHKSVTIAKNLLEPYSALLVEYTSYAD 446 (565)
Q Consensus 407 ~l~i-~GEkl~e~~v~~av~~~~~~l~~~g~~l~~f~~~~d 446 (565)
++-+ .||++.++-++.++.+ ...|...+++.+
T Consensus 474 ~i~l~~GknIaP~~IE~~l~~--------~~~I~qi~vvg~ 506 (613)
T COG1022 474 LIKLSNGKNIAPEPIESKLAK--------SPLIEQICVVGD 506 (613)
T ss_pred eEECCCCcccChHHHHHHHhc--------CCCeeEEEEEec
Confidence 8865 5699999999997754 233456666654
No 118
>PRK08180 feruloyl-CoA synthase; Reviewed
Probab=96.88 E-value=0.0053 Score=69.76 Aligned_cols=46 Identities=13% Similarity=0.110 Sum_probs=32.6
Q ss_pred eecCCEEEEeeeeCCCCEEEEEeecCceeee-eecccC--HHHHHHHHH
Q 044130 380 YRIGDVLQVTGFYNRAPQFRFICRRNVVLSI-DNDKTN--EEDLHKSVT 425 (565)
Q Consensus 380 YriGDvV~v~gf~~~~P~i~F~gR~~~~l~i-~GEkl~--e~~v~~av~ 425 (565)
|++||+.++.+=....-.+.|+||.++++.+ .|+|++ +.+++.++.
T Consensus 442 ~~TGDlg~~~~~~d~~g~l~i~GR~~d~i~~~~G~~i~~~p~Eie~~l~ 490 (614)
T PRK08180 442 YRSGDAVRFVDPADPERGLMFDGRIAEDFKLSSGTWVSVGPLRARAVSA 490 (614)
T ss_pred eeccceEEecCCcCCCCceEEecchhhhEEcCCCcEecchhhhHHHHhh
Confidence 8999999985200112247899999988875 588776 677777664
No 119
>PTZ00216 acyl-CoA synthetase; Provisional
Probab=96.86 E-value=0.0045 Score=71.73 Aligned_cols=60 Identities=17% Similarity=0.134 Sum_probs=47.2
Q ss_pred cCCeEEEEeccc---ccee--------------eeecCCEEEEeeeeCCCCEEEEEeecCceee-eeecccCHHHHHHHH
Q 044130 363 VGHYYELVVTTF---AGLN--------------RYRIGDVLQVTGFYNRAPQFRFICRRNVVLS-IDNDKTNEEDLHKSV 424 (565)
Q Consensus 363 ~G~~YelViTt~---~GLy--------------RYriGDvV~v~gf~~~~P~i~F~gR~~~~l~-i~GEkl~e~~v~~av 424 (565)
+|...||.|... .|.| -|+|||+.++.. --.+.|+||.++++. +.|+++.+.+|+.++
T Consensus 504 ~~~~GEL~vrG~~v~~GY~~~pe~T~~~f~~dGw~~TGDig~~d~----dG~l~i~GR~kd~ik~~~G~~I~p~eIE~~l 579 (700)
T PTZ00216 504 PEPRGEILLRGPFLFKGYYKQEELTREVLDEDGWFHTGDVGSIAA----NGTLRIIGRVKALAKNCLGEYIALEALEALY 579 (700)
T ss_pred CCCCceEEEcCCcccchhcCChhHhhhhccccCCeeccceEEEcC----CCcEEEEEehHhheecCCCceeccHHHHHHH
Confidence 455678888553 3433 389999999863 236999999999996 899999999999998
Q ss_pred HH
Q 044130 425 TI 426 (565)
Q Consensus 425 ~~ 426 (565)
.+
T Consensus 580 ~~ 581 (700)
T PTZ00216 580 GQ 581 (700)
T ss_pred hc
Confidence 65
No 120
>PRK08162 acyl-CoA synthetase; Validated
Probab=96.81 E-value=0.01 Score=65.99 Aligned_cols=57 Identities=9% Similarity=0.120 Sum_probs=47.6
Q ss_pred eEEEEeccc---ccee-------------eeecCCEEEEeeeeCCCCEEEEEeecCceeeeeecccCHHHHHHHHHH
Q 044130 366 YYELVVTTF---AGLN-------------RYRIGDVLQVTGFYNRAPQFRFICRRNVVLSIDNDKTNEEDLHKSVTI 426 (565)
Q Consensus 366 ~YelViTt~---~GLy-------------RYriGDvV~v~gf~~~~P~i~F~gR~~~~l~i~GEkl~e~~v~~av~~ 426 (565)
..||+|+.. .|.| .|++||++++.. --.+.|+||.++++.+.|++++..+|+.++.+
T Consensus 388 ~Gel~v~g~~~~~gY~~~~~~~~~~~~~g~~~TGDl~~~d~----dg~l~~~GR~~~~i~~~G~~v~~~eIE~~l~~ 460 (545)
T PRK08162 388 IGEIMFRGNIVMKGYLKNPKATEEAFAGGWFHTGDLAVLHP----DGYIKIKDRSKDIIISGGENISSIEVEDVLYR 460 (545)
T ss_pred eeEEEEecCcchhhhcCChhhhHHHhhCCCcccCceEEEcC----CccEEEEecccceEEeCCEEECHHHHHHHHHh
Confidence 589999873 3433 389999998864 23789999999999999999999999999965
No 121
>KOG1176 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=96.76 E-value=0.011 Score=66.50 Aligned_cols=120 Identities=12% Similarity=0.146 Sum_probs=84.3
Q ss_pred hhhHHHHHHhcCCCCceeccccccccee--eeecCCCCC-CCCCceeeecCCceeEEeeeCCCCCCccccccccccccCC
Q 044130 275 AQYIPSLEYYSAGKLPLVGTMYASSECY--FGVNLKPLS-NPADVSFTLLPNMCYFEFLPLGGENGTLLSMEFNEEEEVP 351 (565)
Q Consensus 275 ~~y~~~l~~~~g~~~~~~~~~y~aSEg~--~gi~~~~~~-~~~~~~~~l~p~~~ffEFip~~~~~~~~~~~~~~~~~~~~ 351 (565)
.+-..++++.+|. ..+. .+||-||.. +.+|.+... .++.+|.. +| ..-=.|..+.
T Consensus 313 ~~~~~~~~~~l~~-~~v~-q~YGmTE~~~~~~~~~~~~e~k~~svG~~-~~--g~~~~v~~e~----------------- 370 (537)
T KOG1176|consen 313 PATLEKVKERLPN-VTVI-QGYGMTEAGGLITSNDWGPERKPGSVGRL-LP--GVRVKVLDET----------------- 370 (537)
T ss_pred HHHHHHHHHhCCC-ceEE-EeeccccccCceeecCCCccCcccccCcc-cc--ceEEEeeCCC-----------------
Confidence 4667888888884 7777 999999985 467776652 34444543 33 2122222221
Q ss_pred CCceeeccCcccCCeEEEEeccc---ccee--------------eeecCCEEEEeeeeCCCCEEEEEeecCceeeeeecc
Q 044130 352 NDKLVDLGHVRVGHYYELVVTTF---AGLN--------------RYRIGDVLQVTGFYNRAPQFRFICRRNVVLSIDNDK 414 (565)
Q Consensus 352 ~~~~v~l~eve~G~~YelViTt~---~GLy--------------RYriGDvV~v~gf~~~~P~i~F~gR~~~~l~i~GEk 414 (565)
++. +-+++++||.+-.. .|.| =+++||+ ||...--.+.+++|.++++...|++
T Consensus 371 -g~~-----l~~~~~GEI~vrg~~imkGY~~NpeaT~~~~~~~GW~~TGDi----Gy~D~DG~l~IvdR~KdlIk~~G~q 440 (537)
T KOG1176|consen 371 -GVS-----LGPNQTGEICVRGPQVMKGYLKNPEATKEAFDDDGWFHTGDL----GYFDEDGYLYIVDRSKDLIKYGGEQ 440 (537)
T ss_pred -CCC-----CCCCCceEEEEECcccchhhcCChHHHHhhcccCCccccCce----EEEcCCCeEEEecchhhheeeCCEE
Confidence 222 34788899999554 4422 2689998 6666777999999999999999999
Q ss_pred cCHHHHHHHHHH
Q 044130 415 TNEEDLHKSVTI 426 (565)
Q Consensus 415 l~e~~v~~av~~ 426 (565)
+.+.+|+++|..
T Consensus 441 v~P~EiE~vL~~ 452 (537)
T KOG1176|consen 441 VSPAEIEAVLLT 452 (537)
T ss_pred eCHHHHHHHHHh
Confidence 999999999865
No 122
>PRK09029 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=96.74 E-value=0.0054 Score=66.64 Aligned_cols=43 Identities=9% Similarity=0.176 Sum_probs=38.5
Q ss_pred eeecCCEEEEeeeeCCCCEEEEEeecCceeeeeecccCHHHHHHHHHH
Q 044130 379 RYRIGDVLQVTGFYNRAPQFRFICRRNVVLSIDNDKTNEEDLHKSVTI 426 (565)
Q Consensus 379 RYriGDvV~v~gf~~~~P~i~F~gR~~~~l~i~GEkl~e~~v~~av~~ 426 (565)
.|++||++++. + -.+.|+||.++++++.|++++..+|++++.+
T Consensus 333 ~~~TGD~~~~~---~--g~l~~~gR~~d~i~~~G~~v~p~eiE~~l~~ 375 (458)
T PRK09029 333 WFATRDRGEWQ---N--GELTILGRLDNLFFSGGEGIQPEEIERVINQ 375 (458)
T ss_pred ccCCCCcEEEe---C--CEEEEecccccceeeCCEEeCHHHHHHHHhc
Confidence 58999999986 2 2589999999999999999999999999975
No 123
>PLN02479 acetate-CoA ligase
Probab=96.66 E-value=0.01 Score=66.64 Aligned_cols=58 Identities=12% Similarity=0.101 Sum_probs=47.6
Q ss_pred CeEEEEeccc---ccee-------------eeecCCEEEEeeeeCCCCEEEEEeecCceeeeeecccCHHHHHHHHHH
Q 044130 365 HYYELVVTTF---AGLN-------------RYRIGDVLQVTGFYNRAPQFRFICRRNVVLSIDNDKTNEEDLHKSVTI 426 (565)
Q Consensus 365 ~~YelViTt~---~GLy-------------RYriGDvV~v~gf~~~~P~i~F~gR~~~~l~i~GEkl~e~~v~~av~~ 426 (565)
+..||+++.. .|.| .|++||++++.. .-.+.|+||.++++++.|++++..+|+.++..
T Consensus 401 ~~GEl~v~g~~~~~GY~~~~~~t~~~~~~g~~~TGDl~~~~~----~g~l~~~GR~~d~i~~~G~~v~~~eIE~~l~~ 474 (567)
T PLN02479 401 TMGEIVMRGNMVMKGYLKNPKANEEAFANGWFHSGDLGVKHP----DGYIEIKDRSKDIIISGGENISSLEVENVVYT 474 (567)
T ss_pred CceEEEEeccchhhhhhcCcccccchhcCCceecceeEEEcC----CccEEEeccccceEEeCCEEEcHHHHHHHHHh
Confidence 5689999763 2333 499999998753 34689999999999999999999999999965
No 124
>KOG1179 consensus Very long-chain acyl-CoA synthetase/fatty acid transporter [Lipid transport and metabolism]
Probab=96.44 E-value=0.11 Score=57.67 Aligned_cols=223 Identities=18% Similarity=0.175 Sum_probs=128.9
Q ss_pred hhhHHHHHHhcCCCCceecccccccceeee-ecCCCCCCCCCceee--ecCCceeEEeeeCCCCCCccccccccccccCC
Q 044130 275 AQYIPSLEYYSAGKLPLVGTMYASSECYFG-VNLKPLSNPADVSFT--LLPNMCYFEFLPLGGENGTLLSMEFNEEEEVP 351 (565)
Q Consensus 275 ~~y~~~l~~~~g~~~~~~~~~y~aSEg~~g-i~~~~~~~~~~~~~~--l~p~~~ffEFip~~~~~~~~~~~~~~~~~~~~ 351 (565)
.+.++.+.+.|| ++.+.+.||||||.++ +|.+... +..++. +.....=|+.|-.|....+. ...+
T Consensus 369 ~diW~~Fv~RFg--~~~IgE~YgaTEgn~~~~N~d~~v--GA~G~~~~~~~~l~p~~LIk~D~~t~E~--------iRd~ 436 (649)
T KOG1179|consen 369 PDIWQQFVKRFG--IIKIGEFYGATEGNSNLVNYDGRV--GACGFMSRLLKLLYPFRLIKVDPETGEP--------IRDS 436 (649)
T ss_pred chHHHHHHHHcC--CCeEEEEeccccCcceeeeecCcc--ccccchhhhhhhccceEEEEecCCCCce--------eecC
Confidence 345577778888 5555699999999775 5554422 111221 11111127778776533221 1122
Q ss_pred CCceeeccCcccCCeEEEEec--------ccc--------------------ceeeeecCCEEEEeeeeCCCCEEEEEee
Q 044130 352 NDKLVDLGHVRVGHYYELVVT--------TFA--------------------GLNRYRIGDVLQVTGFYNRAPQFRFICR 403 (565)
Q Consensus 352 ~~~~v~l~eve~G~~YelViT--------t~~--------------------GLyRYriGDvV~v~gf~~~~P~i~F~gR 403 (565)
++-=+. +.+||...||=. .+- |=-=|++||++.... ---+-|..|
T Consensus 437 ~G~Ci~---~~~GEpGlLv~~i~~k~P~~~F~GY~g~~~~t~kKl~rDVFkkGD~~f~tGDlLv~D~----~GylYF~DR 509 (649)
T KOG1179|consen 437 QGLCIP---CPPGEPGLLVGKIVQKNPLRSFLGYAGPKKATEKKLLRDVFKKGDVYFNTGDLLVADE----LGYLYFKDR 509 (649)
T ss_pred CceEEE---CCCCCCceEEEEeccCCchhhhccccCchhhhhhhhHHhhhccCcEEEeeCcEEEEec----CCcEEEecc
Confidence 232222 668888866522 122 222378888887663 346789999
Q ss_pred cCceeeeeecccCHHHHHHHHHHHHhhcccCCCeEEeEEEee-cCCCCCceeEEEEEEEecCCCCCCCChHHHHHHHHHH
Q 044130 404 RNVVLSIDNDKTNEEDLHKSVTIAKNLLEPYSALLVEYTSYA-DTSTVPGHYVLYWEIQIVDSPALPLDHQKVLEECCIA 482 (565)
Q Consensus 404 ~~~~l~i~GEkl~e~~v~~av~~~~~~l~~~g~~l~~f~~~~-d~~~~p~~Y~l~~e~e~~~~~~~~~~~~~~l~~~~~~ 482 (565)
++|...-.||+|+-.+|++.+..... + .++.-|-|.. ..+++-+-=.|. .. .+ . .-+++.+-..
T Consensus 510 tGDTFRWKGENVsTtEVe~~l~~~~~-~----~dv~VYGV~VP~~EGRaGMAaI~--~~--p~-----~-~~d~~~l~~~ 574 (649)
T KOG1179|consen 510 TGDTFRWKGENVSTTEVEDVLSALDF-L----QDVNVYGVTVPGYEGRAGMAAIV--LD--PT-----T-EKDLEKLYQH 574 (649)
T ss_pred CCCceeecCCcccHHHHHHHHhhhcc-c----cceeEEEEecCCccCccceEEEE--ec--Cc-----c-cchHHHHHHH
Confidence 99999999999999999888866432 2 1222233322 222232222222 11 11 1 2245555666
Q ss_pred HHHHhChHHHHhhccCCccCCeEEEEeCCCcHHHHHHHHHhcCCCCCCCCCCccc
Q 044130 483 VEEQLDYVYRRCRSHDKSVGPLEIRVVEPGTFETLMDLLVSQGGSINQYKTPRCI 537 (565)
Q Consensus 483 ld~~Ln~~Y~~~R~~~g~l~p~~v~~v~~gtf~~~~~~~~~~G~~~~Q~K~Pr~~ 537 (565)
+.+.| +.|+.=|. . +|. -+| =..|||...+..+++.|-..++++-|--+
T Consensus 575 l~~~L-P~YA~P~F-l-Rl~-~~i--~~TgTFKl~K~~L~~egf~p~~~~dply~ 623 (649)
T KOG1179|consen 575 LRENL-PSYARPRF-L-RLQ-DEI--EKTGTFKLQKTELQKEGFNPAIISDPLYY 623 (649)
T ss_pred HHhhC-ccccchHH-H-HHH-hhh--hcccchhhHHHHHHHccCCccccCCceEE
Confidence 66666 66776653 2 333 133 34799998777788889888888888653
No 125
>TIGR02372 4_coum_CoA_lig 4-coumarate--CoA ligase, photoactive yellow protein activation family. Ectothiorhodospira halophila. This enzyme is designated 6.2.1.12 and therefore joins a number of plant enzymes linked to lignin biosynthesis and given similar names.
Probab=96.21 E-value=0.016 Score=62.61 Aligned_cols=43 Identities=12% Similarity=0.240 Sum_probs=38.4
Q ss_pred eecCCEEEEeeeeCCCCEEEEEeecCceeeeeecccCHHHHHHHHHH
Q 044130 380 YRIGDVLQVTGFYNRAPQFRFICRRNVVLSIDNDKTNEEDLHKSVTI 426 (565)
Q Consensus 380 YriGDvV~v~gf~~~~P~i~F~gR~~~~l~i~GEkl~e~~v~~av~~ 426 (565)
|++||+.++. ....+.|+||.++++++.|+|++..+|++++.+
T Consensus 277 ~~tgD~g~~d----~~G~l~i~GR~dd~Ik~~G~~V~p~eIE~~l~~ 319 (386)
T TIGR02372 277 LDLQDRLAWD----KDGGFTILGRKDEILQVGGVNVSPGHVRDILER 319 (386)
T ss_pred eecCceEEEc----CCCcEEEecccCCEEEECCEEEcHHHHHHHHHc
Confidence 7899998764 446899999999999999999999999999976
No 126
>PF14535 AMP-binding_C_2: AMP-binding enzyme C-terminal domain; PDB: 2Y27_A 2Y4N_A 3QOV_B 3S89_D 3LAX_A 2Y4O_B.
Probab=95.20 E-value=0.023 Score=48.94 Aligned_cols=84 Identities=17% Similarity=0.183 Sum_probs=51.3
Q ss_pred ecccCHHHHHHHHHHHHhhcccCCCeEEeEEEeecCCCCCceeEEEEEEEecCCCCCCCChHHHHHHHHHHHHHHhChHH
Q 044130 412 NDKTNEEDLHKSVTIAKNLLEPYSALLVEYTSYADTSTVPGHYVLYWEIQIVDSPALPLDHQKVLEECCIAVEEQLDYVY 491 (565)
Q Consensus 412 GEkl~e~~v~~av~~~~~~l~~~g~~l~~f~~~~d~~~~p~~Y~l~~e~e~~~~~~~~~~~~~~l~~~~~~ld~~Ln~~Y 491 (565)
|.++++.+|+++|.+.. ++. .+|.+..+....-....+.+|.. .. ...+ ...++.+++.|.++|
T Consensus 1 GvnvfP~~Ie~vl~~~~------~~~-~~y~i~v~~~~~~D~l~v~vE~~--~~--~~~~-~~~~~~l~~~i~~~l---- 64 (96)
T PF14535_consen 1 GVNVFPSQIEEVLREFP------EVS-PEYQIVVTREGGLDELTVRVELR--PG--FSDD-AEDLEALAERIAERL---- 64 (96)
T ss_dssp TEEE-HHHHHHHHCTST------TEE-EEEEEEEEEETTEEEEEEEEEES--TT--CCTT-HHHHHHHHHHHHHHH----
T ss_pred CcEECHHHHHHHHHhCc------CCC-CcEEEEEEcCCCCcEEEEEEEEC--Cc--cCcc-hHHHHHHHHHHHHHH----
Confidence 67899999999997642 211 27877765333333444555554 22 1111 346778888999888
Q ss_pred HHhhccCCccCCeEEEEeCCCcHHH
Q 044130 492 RRCRSHDKSVGPLEIRVVEPGTFET 516 (565)
Q Consensus 492 ~~~R~~~g~l~p~~v~~v~~gtf~~ 516 (565)
|+.. .+. ++|.+|++|++.+
T Consensus 65 ---k~~l-gv~-~~V~lv~~gtLpr 84 (96)
T PF14535_consen 65 ---KERL-GVR-PEVELVPPGTLPR 84 (96)
T ss_dssp ---HHHH-SS--EEEEEE-TT-S--
T ss_pred ---Hhhc-Cce-EEEEEECCCCccC
Confidence 7666 588 5999999999997
No 127
>KOG1177 consensus Long chain fatty acid acyl-CoA ligase [Lipid transport and metabolism]
Probab=91.04 E-value=1.2 Score=48.86 Aligned_cols=63 Identities=17% Similarity=0.289 Sum_probs=53.0
Q ss_pred CcccCCeEEEEe---ccccceee--------------eecCCEEEEeeeeCCCCEEEEEeecCceeeeeecccCHHHHHH
Q 044130 360 HVRVGHYYELVV---TTFAGLNR--------------YRIGDVLQVTGFYNRAPQFRFICRRNVVLSIDNDKTNEEDLHK 422 (565)
Q Consensus 360 eve~G~~YelVi---Tt~~GLyR--------------YriGDvV~v~gf~~~~P~i~F~gR~~~~l~i~GEkl~e~~v~~ 422 (565)
+++.|...||.+ +|..|.|- |++||+-+..- .-.++++||.++|+--.||++.+.+|++
T Consensus 426 ~v~~~~~Gel~iRGY~tMl~Ywg~~~kT~eti~~drW~~TGDi~~m~e----nG~i~iVGRskdmI~rGGENVyP~ElE~ 501 (596)
T KOG1177|consen 426 EVPLGTKGELLIRGYSTMLGYWGEEEKTKETIGNDRWYDTGDIAVMDE----NGTIEIVGRSKDMIIRGGENVYPTELED 501 (596)
T ss_pred ccccCCCceEEEEechhheeecCCcccchhhcccccceecCceEEEcC----CCcEEEEEcccCeEEeCCcccChHHHHH
Confidence 466777899988 56678887 99999988764 3478999999999999999999999998
Q ss_pred HHHH
Q 044130 423 SVTI 426 (565)
Q Consensus 423 av~~ 426 (565)
-+.+
T Consensus 502 fL~~ 505 (596)
T KOG1177|consen 502 FLNK 505 (596)
T ss_pred HHhh
Confidence 8865
No 128
>KOG1256 consensus Long-chain acyl-CoA synthetases (AMP-forming) [Lipid transport and metabolism]
Probab=89.65 E-value=2 Score=49.46 Aligned_cols=136 Identities=15% Similarity=0.188 Sum_probs=84.6
Q ss_pred cccCCCCceEEEEEecch--hhhHHHHHHhcCCCCceecccccccceeeeecCC-C-CCCCCCceeeecCCceeEEeeeC
Q 044130 257 CQLWPRAKYIEAVVTGSM--AQYIPSLEYYSAGKLPLVGTMYASSECYFGVNLK-P-LSNPADVSFTLLPNMCYFEFLPL 332 (565)
Q Consensus 257 ~~lWP~l~~i~~~~~G~~--~~y~~~l~~~~g~~~~~~~~~y~aSEg~~gi~~~-~-~~~~~~~~~~l~p~~~ffEFip~ 332 (565)
..||+| +..+++|++ .+=...+-....+ ++++ ++||-||+.-|..+. + ....+..|-. +|. +-.=++++
T Consensus 415 ~~LGg~---vr~~~sGaAPls~ev~~F~r~~~g-~~v~-eGYGlTEts~g~~~~~~~d~~lgsvG~p-~p~-~~vKL~dv 487 (691)
T KOG1256|consen 415 QSLGGN---VRLIISGAAPLSPEVLTFFRAALG-CRVL-EGYGLTETSAGTTLTLPGDNVLGSVGPP-VPG-NEVKLVDV 487 (691)
T ss_pred HHhcCc---eeEEEecCCCCCHHHHHHHHHhcC-ceee-ecccccccCCceEeccCCCCCCCCcCCc-ccC-ceEEEech
Confidence 368999 888999983 3322332233344 8888 999999997442221 1 1112233332 332 23444554
Q ss_pred CCCCCccccccccccccCCCCceeeccCcccCCeEEEEeccc---cceee--------------eecCCEEEEeeeeCCC
Q 044130 333 GGENGTLLSMEFNEEEEVPNDKLVDLGHVRVGHYYELVVTTF---AGLNR--------------YRIGDVLQVTGFYNRA 395 (565)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~v~l~eve~G~~YelViTt~---~GLyR--------------YriGDvV~v~gf~~~~ 395 (565)
.+.+-. -.|.++||-|--. .|.|- .++|||=++.. .
T Consensus 488 pe~ny~-----------------------a~~~~GEIcirG~~Vf~GYyK~p~~T~e~ideDGWLhTGDiG~~~p----~ 540 (691)
T KOG1256|consen 488 PEMNYD-----------------------ADGSKGEICVRGPNVFMGYYKDPEKTAEAIDEDGWLHTGDIGEWDP----N 540 (691)
T ss_pred HHhCcC-----------------------cCCCcceEEEecchhceeccCChHHHhhhhccccccccccceeECC----C
Confidence 443311 1344566666332 44432 47999877775 4
Q ss_pred CEEEEEeecCceeeeee-cccCHHHHHHHHHH
Q 044130 396 PQFRFICRRNVVLSIDN-DKTNEEDLHKSVTI 426 (565)
Q Consensus 396 P~i~F~gR~~~~l~i~G-Ekl~e~~v~~av~~ 426 (565)
-.+.+++|.++++.+.+ |.+.++.++++..+
T Consensus 541 G~l~IidRkK~ifklaqGEyVaPe~IEniy~~ 572 (691)
T KOG1256|consen 541 GTLKIIDRKKNIFKLAQGEYVAPEKIENIYKR 572 (691)
T ss_pred ccEEEEecccceEEcCCCCccChHHHHHHHhc
Confidence 48999999999999876 99999999999865
No 129
>COG1020 EntF Non-ribosomal peptide synthetase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=86.41 E-value=4.1 Score=46.36 Aligned_cols=59 Identities=17% Similarity=0.329 Sum_probs=45.1
Q ss_pred cCCeEEEEeccc---cc------------ee--eeecCCEEEEeeeeCCCCEEEEEeecCceeeeeecccCHHHHHHHHH
Q 044130 363 VGHYYELVVTTF---AG------------LN--RYRIGDVLQVTGFYNRAPQFRFICRRNVVLSIDNDKTNEEDLHKSVT 425 (565)
Q Consensus 363 ~G~~YelViTt~---~G------------Ly--RYriGDvV~v~gf~~~~P~i~F~gR~~~~l~i~GEkl~e~~v~~av~ 425 (565)
.|...|+.|+.. .| +. -|++||++| +..--.++|+||.+..+.+.|..+-..+++.++.
T Consensus 564 ~gv~gel~i~g~~~a~gy~~~p~lt~~~f~~~~~y~tgD~~r----~~~dg~~e~lgr~D~qvki~g~Riel~eie~~l~ 639 (642)
T COG1020 564 LGVPGELYIAGLGLALGYLNRPDLTAERFIALRLYRTGDLAR----PLADGALEYLGRKDSQVKIRGFRIELGEIEAALA 639 (642)
T ss_pred CCCCeeeEECCcchhhhhcCChhhhHHHhhhccCccCCCeee----ECCCCeEEEeccccceeEeceEecCcHHHHHHHh
Confidence 566667777664 23 11 499999999 2455589999999999999999997788877664
No 130
>KOG1180 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=85.74 E-value=9.3 Score=43.00 Aligned_cols=160 Identities=14% Similarity=0.235 Sum_probs=93.3
Q ss_pred EEEEEecch--hhhHHHHHHhcCCCCceecccccccceeeeec-CCCCC-CCCCceeeecCCceeEEeeeCCCCCCcccc
Q 044130 266 IEAVVTGSM--AQYIPSLEYYSAGKLPLVGTMYASSECYFGVN-LKPLS-NPADVSFTLLPNMCYFEFLPLGGENGTLLS 341 (565)
Q Consensus 266 i~~~~~G~~--~~y~~~l~~~~g~~~~~~~~~y~aSEg~~gi~-~~~~~-~~~~~~~~l~p~~~ffEFip~~~~~~~~~~ 341 (565)
|.-+++||+ ++=.+++-..+=. +|+. -+||-||..-|-. .++.+ ..+.+|.. + .++++-.++.++..
T Consensus 404 lR~~LsGGapLS~dtQrF~nic~C-~Pv~-qGYGLTEtca~~tv~e~~d~~~g~vG~p-l-~c~eiKLvdw~EgG----- 474 (678)
T KOG1180|consen 404 LRYILSGGAPLSPDTQRFMNICFC-CPVL-QGYGLTETCAAATVLEPEDFSTGRVGAP-L-PCCEIKLVDWEEGG----- 474 (678)
T ss_pred eEEEEeCCCCCCHHHHHHHHHhcc-cccc-ccccccchhcccEecChhhcccccccCC-c-cceEEEEEEhhhcC-----
Confidence 566777874 4555666655543 6887 9999999865422 22211 11122322 1 44577777776532
Q ss_pred ccccccccCCCCceee------ccCcccCCeEEEEeccccceeeeecCCEEEEeeeeCCCCEEEEEeecCceee-eeecc
Q 044130 342 MEFNEEEEVPNDKLVD------LGHVRVGHYYELVVTTFAGLNRYRIGDVLQVTGFYNRAPQFRFICRRNVVLS-IDNDK 414 (565)
Q Consensus 342 ~~~~~~~~~~~~~~v~------l~eve~G~~YelViTt~~GLyRYriGDvV~v~gf~~~~P~i~F~gR~~~~l~-i~GEk 414 (565)
-|.++.+ ++++.+- +.=.+--++=.-..|.-.|---|++|||-+++- --.+++..|.++++. .+||=
T Consensus 475 -Y~~~~~P-PrGEI~i~G~~vt~gY~kn~ekT~e~ft~~~G~~WF~TGDIGe~~p----dG~LkIIDRKKdLVKlq~GEY 548 (678)
T KOG1180|consen 475 -YFAKNKP-PRGEILIGGPNVTMGYYKNEEKTKEDFTVEDGQRWFRTGDIGEFHP----DGCLKIIDRKKDLVKLQNGEY 548 (678)
T ss_pred -ccCCCCC-CCceEEecCCccChhhhCChhhhhhhceecCCcEEEeccccceecC----CCcEEEeechhhhhhhcccce
Confidence 1222232 3333321 111111111122334457766789999999984 347899999999876 57899
Q ss_pred cCHHHHHHHHHHHHhhcccCCCeEEeEEEeecCC
Q 044130 415 TNEEDLHKSVTIAKNLLEPYSALLVEYTSYADTS 448 (565)
Q Consensus 415 l~e~~v~~av~~~~~~l~~~g~~l~~f~~~~d~~ 448 (565)
++=.-|+.|+.. .--|.+-+|++|..
T Consensus 549 IsL~KvEa~l~s--------~p~V~NICvyAd~~ 574 (678)
T KOG1180|consen 549 ISLGKVEAALRS--------SPYVDNICVYADSN 574 (678)
T ss_pred eehHHHHHHHhc--------CcchhheEEecccc
Confidence 999999888754 22344677888854
No 131
>PRK09188 serine/threonine protein kinase; Provisional
Probab=67.04 E-value=7.8 Score=41.68 Aligned_cols=39 Identities=8% Similarity=0.043 Sum_probs=30.9
Q ss_pred eeecCCEEEEeeeeCCCCEEEEEeecCceeeeee---cccCHHHHHHHHHH
Q 044130 379 RYRIGDVLQVTGFYNRAPQFRFICRRNVVLSIDN---DKTNEEDLHKSVTI 426 (565)
Q Consensus 379 RYriGDvV~v~gf~~~~P~i~F~gR~~~~l~i~G---Ekl~e~~v~~av~~ 426 (565)
-|+|||++++.+ .--.+.|+||.+ .| |++++. |+.++.+
T Consensus 210 W~~TGDlg~~~d---~dG~l~~~gR~~-----~G~~i~nV~p~-IE~~L~~ 251 (365)
T PRK09188 210 WLATGKKVYNFI---TRGLFSWSDGEG-----TGDRIDNEAPA-IQAALKS 251 (365)
T ss_pred EEeCCCEEEEEc---CCCeEEEEecCc-----CCcCceeeCHH-HHHHHHh
Confidence 489999998731 223599999997 68 899999 9888866
No 132
>PF07311 Dodecin: Dodecin; InterPro: IPR009923 This entry represents proteins with a Dodecin-like topology. Dodecin flavoprotein is a small dodecameric flavin-binding protein from Halobacterium salinarium (Halobacterium halobium) that contains two flavins stacked in a single binding pocket between two tryptophan residues to form an aromatic tetrade []. Dodecin binds riboflavin, although it appears to have a broad specificity for flavins. Lumichrome, a molecule associated with flavin metabolism, appears to be a ligand of dodecin, which could act as a waste-trapping device. ; PDB: 2VYX_L 2DEG_F 2V18_K 2V19_D 2UX9_B 2CZ8_E 2V21_F 2CC8_A 2CCB_A 2VX9_A ....
Probab=49.21 E-value=62 Score=26.16 Aligned_cols=49 Identities=14% Similarity=0.114 Sum_probs=36.7
Q ss_pred cccCHHHHHHHHHHHHhhccc-CCCeEEeEEEeecCCCCCceeEEEEEEEe
Q 044130 413 DKTNEEDLHKSVTIAKNLLEP-YSALLVEYTSYADTSTVPGHYVLYWEIQI 462 (565)
Q Consensus 413 Ekl~e~~v~~av~~~~~~l~~-~g~~l~~f~~~~d~~~~p~~Y~l~~e~e~ 462 (565)
++-.|+.+++||.+|.+.++. .++++.+.++..+. +.-.||.+-+.+.|
T Consensus 13 ~~S~edAv~~Av~~A~kTl~ni~~~eV~e~~~~v~d-g~i~~y~v~lkv~F 62 (66)
T PF07311_consen 13 PKSWEDAVQNAVARASKTLRNIRWFEVKEQRGHVED-GKITEYQVNLKVSF 62 (66)
T ss_dssp SSHHHHHHHHHHHHHHHHSSSEEEEEEEEEEEEEET-TCEEEEEEEEEEEE
T ss_pred CCCHHHHHHHHHHHHhhchhCcEEEEEEEEEEEEeC-CcEEEEEEEEEEEE
Confidence 566799999999999987742 25778888877665 35568987777765
No 133
>PTZ00189 60S ribosomal protein L21; Provisional
Probab=47.77 E-value=14 Score=35.01 Aligned_cols=36 Identities=17% Similarity=0.353 Sum_probs=31.4
Q ss_pred eeeeecCCEEEEee---eeCCCCEEEEEeecCceeeeee
Q 044130 377 LNRYRIGDVLQVTG---FYNRAPQFRFICRRNVVLSIDN 412 (565)
Q Consensus 377 LyRYriGDvV~v~g---f~~~~P~i~F~gR~~~~l~i~G 412 (565)
|-=|+.||+|-+.+ .+.+.|-=.|.||++.+.|+.|
T Consensus 31 l~~yk~GD~VdIk~d~svqkGMPhk~YHGkTG~V~nv~~ 69 (160)
T PTZ00189 31 LTTFKVGDYVDIVVDSAVHKGMPYKYYHGRTGRVFNVTP 69 (160)
T ss_pred HHHccCCCEEEEEecCCeecCCCcccccCCCeEEEeecC
Confidence 55699999999988 6678998899999999999887
No 134
>PF11454 DUF3016: Protein of unknown function (DUF3016); InterPro: IPR021557 This is a bacterial family of uncharacterised proteins.
Probab=45.52 E-value=35 Score=31.75 Aligned_cols=42 Identities=24% Similarity=0.222 Sum_probs=31.8
Q ss_pred cccCCeEEEEeccc--cceeee----ecCCEEEEeeeeCCCCEEEEEeec
Q 044130 361 VRVGHYYELVVTTF--AGLNRY----RIGDVLQVTGFYNRAPQFRFICRR 404 (565)
Q Consensus 361 ve~G~~YelViTt~--~GLyRY----riGDvV~v~gf~~~~P~i~F~gR~ 404 (565)
|.+|++-+|.||.. ||-+++ .++|| ||+- .--+|+|+|.+..
T Consensus 47 Lp~gq~L~v~VtDvDLAG~~~P~~~~~~~dv-Rvvk-di~pPRI~l~Y~L 94 (141)
T PF11454_consen 47 LPPGQTLEVTVTDVDLAGDVEPFWGSGANDV-RVVK-DIYPPRIELSYTL 94 (141)
T ss_pred CCCCCEEEEEEEecccCcccccCcCCCCCcE-EEEc-cCCCCcEEEEEEE
Confidence 67999999999997 897766 45555 5553 1568999988764
No 135
>PRK04306 50S ribosomal protein L21e; Reviewed
Probab=43.25 E-value=19 Score=31.45 Aligned_cols=36 Identities=19% Similarity=0.326 Sum_probs=30.0
Q ss_pred eeeeecCCEEEEee---eeCCCCEEEEEeecCceeeeee
Q 044130 377 LNRYRIGDVLQVTG---FYNRAPQFRFICRRNVVLSIDN 412 (565)
Q Consensus 377 LyRYriGDvV~v~g---f~~~~P~i~F~gR~~~~l~i~G 412 (565)
|-=|+.||.|-+.+ ++.+.|-=.|-||++.+.++.|
T Consensus 32 l~~y~~Gd~V~I~~d~sv~kGmPh~~yhGkTG~V~~v~~ 70 (98)
T PRK04306 32 LQEFEEGDKVHIVIDPSVHKGMPHPRFHGKTGTVVGKRG 70 (98)
T ss_pred HHhccCCCEEEEEecCceecCCccccccCCCEEEEeecC
Confidence 55689999998887 3457888899999999998887
No 136
>PLN00190 60S ribosomal protein L21; Provisional
Probab=42.24 E-value=19 Score=34.11 Aligned_cols=36 Identities=17% Similarity=0.412 Sum_probs=31.1
Q ss_pred eeeeecCCEEEEee---eeCCCCEEEEEeecCceeeeee
Q 044130 377 LNRYRIGDVLQVTG---FYNRAPQFRFICRRNVVLSIDN 412 (565)
Q Consensus 377 LyRYriGDvV~v~g---f~~~~P~i~F~gR~~~~l~i~G 412 (565)
|.=|+.||+|-+.+ ++.+.|-=.|.||++.+.|+.|
T Consensus 31 l~~yk~GD~VdIk~~~svqKGMPhk~YHGkTG~V~nv~~ 69 (158)
T PLN00190 31 LRTFKVGDYVDIKVNGAIHKGMPHKFYHGRTGIVWNVTK 69 (158)
T ss_pred HHHhcCCCEEEEEecCCeecCCCcccccCCCeEEEeecC
Confidence 55699999999987 5567898899999999998887
No 137
>TIGR03335 F390_ftsA coenzyme F390 synthetase. This enzyme, characterized in Methanobacterium thermoautotrophicum and found in several other methanogens, modifies coenzyme F420 by ligation of AMP (or GMP) from ATP (or GTP). On F420, it activates an aromatic hydroxyl group, which is unusual chemistry for an adenylyltransferase. This enzyme name has been attached to numbers of uncharacterized genes likely to instead act as phenylacetate CoA ligase, based on proximity to predicted indolepyruvate ferredoxin oxidoreductase (1.2.7.8) genes. The enzyme acts during transient exposure of the organism to oxygen.
Probab=40.22 E-value=28 Score=38.12 Aligned_cols=49 Identities=16% Similarity=0.272 Sum_probs=39.2
Q ss_pred hcHHHHHHHHHHHHHHHc-CCChHHHhhh--C-----CCCChhhhhhcCCCccCCcch
Q 044130 23 AKADEVQNNLLREILIRN-GETEYLRKYL--R-----GSKDVSDFKRCVPVSTYKNIY 72 (565)
Q Consensus 23 ~~~~~~Q~~~L~~iL~~n-~~T~ygk~~f--~-----~i~~~e~Fr~~VPl~~Yed~~ 72 (565)
+.-++.|.+-|+++|+.. .++.|-|++| . .|++.+|+++ +|+++=+|++
T Consensus 12 ~~l~~~q~~rl~~~l~~a~~~spfYr~~~~~~g~~p~~i~sl~dl~~-lP~~~k~~lr 68 (445)
T TIGR03335 12 GELDALVEERIRYTVHYAAEHSPFYKKWFQENNISPSDIKSHEDLLE-LPVISGEVIR 68 (445)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHcCCChhhCCCHHHHHH-CCCCCHHHHH
Confidence 345788999999999876 5799999874 2 4678999987 9999877664
No 138
>COG2139 RPL21A Ribosomal protein L21E [Translation, ribosomal structure and biogenesis]
Probab=35.06 E-value=28 Score=30.12 Aligned_cols=36 Identities=22% Similarity=0.522 Sum_probs=28.7
Q ss_pred eeeeecCCEEEEe---eeeCCCCEEEEEeecCceeeeee
Q 044130 377 LNRYRIGDVLQVT---GFYNRAPQFRFICRRNVVLSIDN 412 (565)
Q Consensus 377 LyRYriGDvV~v~---gf~~~~P~i~F~gR~~~~l~i~G 412 (565)
|.-|..||.|-++ +++.+.|-=+|.||++.+....|
T Consensus 30 l~ey~~Gd~V~I~IdpSv~kGmPh~rf~G~TG~Vvg~~g 68 (98)
T COG2139 30 LQEYKVGDKVHIDIDPSVHKGMPHPRFQGKTGTVVGVRG 68 (98)
T ss_pred HhhccCCCEEEEEeCcccccCCCCccccCcceEEEeccC
Confidence 6678888888776 46677888889999998887777
No 139
>PF04443 LuxE: Acyl-protein synthetase, LuxE; InterPro: IPR007534 LuxE is an acyl-protein synthetase found in bioluminescent bacteria. LuxE catalyses the formation of an acyl-protein thiolester from a fatty acid and a protein. This is the second step in the bioluminescent fatty acid reduction system, which converts tetradecanoic acid to the aldehyde substrate of the luciferase-catalysed bioluminescence reaction []. A conserved cysteine found at position 364 in Photobacterium phosphoreum LuxE (Q52100 from SWISSPROT) is thought to be acylated during the transfer of the acyl group from the synthetase subunit to the reductase. The C-terminal of the synthetase is though to act as a flexible arm to transfer acyl groups between the sites of activation and reduction []. A LuxE domain is also found in the Vibrio cholerae RBFN protein (Q06961 from SWISSPROT), which is involved in the biosynthesis of the O-antigen component 3-deoxy-L-glycero-tetronic acid. This entry represents the LuxE domain, which is found in archaeal and bacterial proteins.; GO: 0047474 long-chain fatty acid luciferin component ligase activity, 0008218 bioluminescence
Probab=35.02 E-value=1.3e+02 Score=32.38 Aligned_cols=105 Identities=14% Similarity=0.156 Sum_probs=60.5
Q ss_pred hhHHHHHHhcCC-CC-ceecccccccceeeeecCCCCCCCCCceeeecCCceeEEeeeCCCCCCccccccccccccCCCC
Q 044130 276 QYIPSLEYYSAG-KL-PLVGTMYASSECYFGVNLKPLSNPADVSFTLLPNMCYFEFLPLGGENGTLLSMEFNEEEEVPND 353 (565)
Q Consensus 276 ~y~~~l~~~~g~-~~-~~~~~~y~aSEg~~gi~~~~~~~~~~~~~~l~p~~~ffEFip~~~~~~~~~~~~~~~~~~~~~~ 353 (565)
.+...+++.+|. +. .++ ..||.||...= -+++ +...++..|. |-.-+ |
T Consensus 243 ef~~~l~~~~Gv~~~~~i~-~~ygmtEl~s~-~~~~----~~~~~~~p~w------V~iRD------------------p 292 (365)
T PF04443_consen 243 EFYARLQEVFGVIPIENIY-DMYGMTELNSQ-AYEC----GHGHFHVPPW------VIIRD------------------P 292 (365)
T ss_pred HHHHHHHHHHCCCCHHHee-eeeeccccchh-heeC----CCCcccCCCe------EEEEC------------------C
Confidence 566778888872 12 555 89999996321 1222 1222322221 11111 3
Q ss_pred ceeeccCcccCCeEEEEeccc-----cceeeeecCCEEEEeeee-----CCCCEEEEEeecCceeeeeecccC
Q 044130 354 KLVDLGHVRVGHYYELVVTTF-----AGLNRYRIGDVLQVTGFY-----NRAPQFRFICRRNVVLSIDNDKTN 416 (565)
Q Consensus 354 ~~v~l~eve~G~~YelViTt~-----~GLyRYriGDvV~v~gf~-----~~~P~i~F~gR~~~~l~i~GEkl~ 416 (565)
.+ +..|..|+++-|.+=+. -|. =-|.|+-.+.+ . +..+.|+++||.+ .-.++|-.++
T Consensus 293 ~t--l~~~~~Ge~Gli~vidl~~~s~p~~--IlTeDlGvl~~-~~~c~cr~g~~f~vlGR~~-~ae~RGCs~~ 359 (365)
T PF04443_consen 293 ET--LEPLPPGETGLIQVIDLANTSYPGF--ILTEDLGVLHG-DDDCGCRKGKYFEVLGRAD-GAEIRGCSLT 359 (365)
T ss_pred CC--CcCCCCCCeeEEEEEcccccCCCcE--EEEcceeeecC-CCCCCCccCCEEEEEeCCC-CCccCCcHHH
Confidence 33 34577899998877554 244 44899986665 2 2345899999985 5666665443
No 140
>cd03483 MutL_Trans_MLH1 MutL_Trans_MLH1: transducer domain, having a ribosomal S5 domain 2-like fold, found in proteins similar to yeast and human MLH1 (MutL homologue 1). This transducer domain is homologous to the second domain of the DNA gyrase B subunit, which is known to be important in nucleotide hydrolysis and the transduction of structural signals from ATP-binding site to the DNA breakage/reunion regions of the enzymes. MLH1 forms heterodimers with PMS2, PMS1 and MLH3. These three complexes have distinct functions in meiosis. hMLH1-hPMS2 also participates in the repair of all DNA mismatch repair (MMR) substrates. Roles for hMLH1-hPMS1 or hMLH1-hMLH3 in MMR have not been established. Cells lacking hMLH1 have a strong mutator phenotype and display microsatellite instability (MSI). Mutation in hMLH1 causes predisposition to HNPCC, Muir-Torre syndrome and Turcot syndrome (HNPCC variant). Mutation in hMLH1 accounts for a large fraction of HNPCC families.
Probab=34.53 E-value=86 Score=28.25 Aligned_cols=46 Identities=13% Similarity=0.138 Sum_probs=38.2
Q ss_pred CCEEEEeeeeCCCCEEEEEeecCceeeeeecccCHHHHHHHHHHHHhh
Q 044130 383 GDVLQVTGFYNRAPQFRFICRRNVVLSIDNDKTNEEDLHKSVTIAKNL 430 (565)
Q Consensus 383 GDvV~v~gf~~~~P~i~F~gR~~~~l~i~GEkl~e~~v~~av~~~~~~ 430 (565)
++-+++.||- +.|.+- .+|..+++-++|--+....+.+||.++-..
T Consensus 29 ~~~~~i~G~i-s~p~~~-~~~~~q~~fVNgR~V~~~~l~~aI~~~Y~~ 74 (127)
T cd03483 29 DLGFKVKGLI-SNANYS-KKKIIFILFINNRLVECSALRRAIENVYAN 74 (127)
T ss_pred CCcEEEEEEE-cCchhc-CCCceEEEEEcCCEecCHHHHHHHHHHHHH
Confidence 3568999985 567776 788888999999999999999999988653
No 141
>COG2026 RelE Cytotoxic translational repressor of toxin-antitoxin stability system [Translation, ribosomal structure and biogenesis / Cell division and chromosome partitioning]
Probab=30.23 E-value=83 Score=26.72 Aligned_cols=31 Identities=19% Similarity=0.210 Sum_probs=20.1
Q ss_pred EEEEeccccceeeeecCCEEEEeeeeCCCCE
Q 044130 367 YELVVTTFAGLNRYRIGDVLQVTGFYNRAPQ 397 (565)
Q Consensus 367 YelViTt~~GLyRYriGDvV~v~gf~~~~P~ 397 (565)
+-......+|+||+|+||-.-+--+......
T Consensus 43 ~k~~~~~~~~~~R~RiG~YRlIy~i~d~~~~ 73 (90)
T COG2026 43 GKKLRKGLSGKYRLRIGDYRLIYEIDDETLT 73 (90)
T ss_pred ceecccCCCCeEEEEecCEEEEEEEECCceE
Confidence 3444555688999999995555555444443
No 142
>PF12690 BsuPI: Intracellular proteinase inhibitor; InterPro: IPR020481 BsuPI is a intracellular proteinase inhibitor that directly regulates the major intracellular proteinase (ISP-1) activity in vivo. It inhibits ISP-1 in the early stages of sporulation and then may be inactivated by a membrane-bound proteinase [].; PDB: 3ISY_A.
Probab=28.53 E-value=37 Score=28.40 Aligned_cols=23 Identities=30% Similarity=0.530 Sum_probs=15.9
Q ss_pred cccCCeEEEEeccccc--eeeeecC
Q 044130 361 VRVGHYYELVVTTFAG--LNRYRIG 383 (565)
Q Consensus 361 ve~G~~YelViTt~~G--LyRYriG 383 (565)
---|++|+++|.+..| +|||--|
T Consensus 20 f~sgq~~D~~v~d~~g~~vwrwS~~ 44 (82)
T PF12690_consen 20 FPSGQRYDFVVKDKEGKEVWRWSDG 44 (82)
T ss_dssp ESSS--EEEEEE-TT--EEEETTTT
T ss_pred eCCCCEEEEEEECCCCCEEEEecCC
Confidence 4589999999999988 9999743
No 143
>PF09926 DUF2158: Uncharacterized small protein (DUF2158); InterPro: IPR019226 This entry represents a family of predominantly prokaryotic proteins with no known function.
Probab=24.19 E-value=66 Score=24.82 Aligned_cols=18 Identities=33% Similarity=0.804 Sum_probs=13.7
Q ss_pred eecCCEEEEeeeeCCCCEEEE
Q 044130 380 YRIGDVLQVTGFYNRAPQFRF 400 (565)
Q Consensus 380 YriGDvV~v~gf~~~~P~i~F 400 (565)
|.+||+|+..+ +.|++..
T Consensus 1 f~~GDvV~LKS---GGp~MTV 18 (53)
T PF09926_consen 1 FKIGDVVQLKS---GGPRMTV 18 (53)
T ss_pred CCCCCEEEEcc---CCCCeEE
Confidence 67999999996 6665544
No 144
>cd04473 S1_RecJ_like S1_RecJ_like: The S1 domain of the archaea-specific RecJ-like exonuclease. The function of this family is not fully understood. In Escherichia coli, RecJ degrades single-stranded DNA in the 5'-3' direction and participates in homologous recombination and mismatch repair.
Probab=23.03 E-value=1.1e+02 Score=24.77 Aligned_cols=20 Identities=20% Similarity=0.331 Sum_probs=14.1
Q ss_pred eeeccCcccCCeEEEEeccc
Q 044130 355 LVDLGHVRVGHYYELVVTTF 374 (565)
Q Consensus 355 ~v~l~eve~G~~YelViTt~ 374 (565)
.+.+.+++.|+.|+-.|+..
T Consensus 8 ~~~~~~~~~G~~~~g~V~~i 27 (77)
T cd04473 8 ACTMEDLEVGKLYKGKVNGV 27 (77)
T ss_pred ccchhhCCCCCEEEEEEEeE
Confidence 45566778888888777643
No 145
>PF01157 Ribosomal_L21e: Ribosomal protein L21e; InterPro: IPR001147 Ribosomes are the particles that catalyse mRNA-directed protein synthesis in all organisms. The codons of the mRNA are exposed on the ribosome to allow tRNA binding. This leads to the incorporation of amino acids into the growing polypeptide chain in accordance with the genetic information. Incoming amino acid monomers enter the ribosomal A site in the form of aminoacyl-tRNAs complexed with elongation factor Tu (EF-Tu) and GTP. The growing polypeptide chain, situated in the P site as peptidyl-tRNA, is then transferred to aminoacyl-tRNA and the new peptidyl-tRNA, extended by one residue, is translocated to the P site with the aid the elongation factor G (EF-G) and GTP as the deacylated tRNA is released from the ribosome through one or more exit sites [, ]. About 2/3 of the mass of the ribosome consists of RNA and 1/3 of protein. The proteins are named in accordance with the subunit of the ribosome which they belong to - the small (S1 to S31) and the large (L1 to L44). Usually they decorate the rRNA cores of the subunits. Many ribosomal proteins, particularly those of the large subunit, are composed of a globular, surfaced-exposed domain with long finger-like projections that extend into the rRNA core to stabilise its structure. Most of the proteins interact with multiple RNA elements, often from different domains. In the large subunit, about 1/3 of the 23S rRNA nucleotides are at least in van der Waal's contact with protein, and L22 interacts with all six domains of the 23S rRNA. Proteins S4 and S7, which initiate assembly of the 16S rRNA, are located at junctions of five and four RNA helices, respectively. In this way proteins serve to organise and stabilise the rRNA tertiary structure. While the crucial activities of decoding and peptide transfer are RNA based, proteins play an active role in functions that may have evolved to streamline the process of protein synthesis. In addition to their function in the ribosome, many ribosomal proteins have some function 'outside' the ribosome [, ]. L21E family contains proteins from a number of eukaryotic and archaebacterial organisms which include; mammalian L2, Entamoeba histolytica L21, Caenorhabditis elegans L21 (C14B9.7), Saccharomyces cerevisiae (Baker's yeast) L21E (URP1) and Haloarcula marismortui HL31.; GO: 0003735 structural constituent of ribosome, 0006412 translation, 0005622 intracellular, 0005840 ribosome; PDB: 3IZR_U 1S1I_Q 3O58_T 3IZS_U 3O5H_T 1Q82_R 1KQS_P 3CCJ_Q 3CCQ_Q 1VQ5_Q ....
Probab=23.02 E-value=20 Score=31.39 Aligned_cols=35 Identities=20% Similarity=0.459 Sum_probs=19.4
Q ss_pred eeeeecCCEEEEee---eeCCCCEEEEEeecCceeeee
Q 044130 377 LNRYRIGDVLQVTG---FYNRAPQFRFICRRNVVLSID 411 (565)
Q Consensus 377 LyRYriGDvV~v~g---f~~~~P~i~F~gR~~~~l~i~ 411 (565)
|--|..||.|-+.+ .+.+.|-=.|.||++.+.|+.
T Consensus 30 l~~yk~GD~V~I~id~sv~kGmPh~~yHGkTG~V~~v~ 67 (99)
T PF01157_consen 30 LQEYKVGDKVDIKIDPSVHKGMPHKRYHGKTGRVFNVT 67 (99)
T ss_dssp H----TT-EEEE---TTSSSSS--GGGTTEEEEEEEE-
T ss_pred HHHccCCCEEEEEecCccccCCCcceECCCceeEEEeC
Confidence 56788999998876 335688778889998888654
No 146
>cd04931 ACT_PAH ACT domain of the nonheme iron-dependent aromatic amino acid hydroxylase, phenylalanine hydroxylases (PAH). ACT domain of the nonheme iron-dependent aromatic amino acid hydroxylase, phenylalanine hydroxylases (PAH). PAH catalyzes the hydroxylation of L-Phe to L-Tyr, the first step in the catabolic degradation of L-Phe. In PAH, an autoregulatory sequence, N-terminal of the ACT domain, extends across the catalytic domain active site and regulates the enzyme by intrasteric regulation. It appears that the activation by L-Phe induces a conformational change that converts the enzyme to a high-affinity and high-activity state. Modulation of activity is achieved through inhibition by BH4 and activation by phosphorylation of serine residues of the autoregulatory region. The molecular basis for the cooperative activation process is not fully understood yet. Members of this CD belong to the superfamily of ACT regulatory domains.
Probab=22.57 E-value=3.4e+02 Score=23.04 Aligned_cols=41 Identities=12% Similarity=0.131 Sum_probs=28.2
Q ss_pred HHHHHHHHHHHHhhcccCCCeEEeEEEeecCCCCCceeEEEEEEEe
Q 044130 417 EEDLHKSVTIAKNLLEPYSALLVEYTSYADTSTVPGHYVLYWEIQI 462 (565)
Q Consensus 417 e~~v~~av~~~~~~l~~~g~~l~~f~~~~d~~~~p~~Y~l~~e~e~ 462 (565)
+..+..++..+.. .|+.+..-...+. ...++.|.+|++++.
T Consensus 25 pGsL~~vL~~Fa~----~~INLt~IeSRP~-~~~~~~Y~FfVDieg 65 (90)
T cd04931 25 VGALAKVLRLFEE----KDINLTHIESRPS-RLNKDEYEFFINLDK 65 (90)
T ss_pred CcHHHHHHHHHHH----CCCCEEEEEeccC-CCCCceEEEEEEEEc
Confidence 4567777777653 6777766655543 336678999999974
No 147
>COG2457 Uncharacterized conserved protein [Function unknown]
Probab=22.07 E-value=1.3e+02 Score=29.62 Aligned_cols=34 Identities=29% Similarity=0.378 Sum_probs=28.1
Q ss_pred ccCcccCCeEEEEecccc--------ceeeeecCCEEEEeeeeC
Q 044130 358 LGHVRVGHYYELVVTTFA--------GLNRYRIGDVLQVTGFYN 393 (565)
Q Consensus 358 l~eve~G~~YelViTt~~--------GLyRYriGDvV~v~gf~~ 393 (565)
.-..+.|+-||++++|.+ |+++ .||.+++.=|.+
T Consensus 7 ~f~~~~G~IyEviviT~~~~~N~aPIGIi~--~gd~~~~kLy~G 48 (199)
T COG2457 7 MFGPEEGKIYEVIVITRGENPNAAPIGIIV--KGDKLKVKLYKG 48 (199)
T ss_pred HhCcccCceEEEEEEecCCCCCcCceEEEE--eCCEEEEEEecC
Confidence 345779999999999986 8887 999999987643
No 148
>PF08838 DUF1811: Protein of unknown function (DUF1811); InterPro: IPR014938 This entry consists uncharacterised bacterial proteins. Some of the proteins are annotated as being transcriptional regulators (see Q4MQL7 from SWISSPROT, Q65MA2 from SWISSPROT). The structure of one of the proteins has revealed a beta-barrel like structure with helix-turn-helix like motif. ; PDB: 2YXY_A 1SF9_A.
Probab=20.29 E-value=89 Score=27.45 Aligned_cols=37 Identities=24% Similarity=0.372 Sum_probs=25.1
Q ss_pred eeeccCcccCCeEEEE--------eccccc--eeeeecCCEEEEeee
Q 044130 355 LVDLGHVRVGHYYELV--------VTTFAG--LNRYRIGDVLQVTGF 391 (565)
Q Consensus 355 ~v~l~eve~G~~YelV--------iTt~~G--LyRYriGDvV~v~gf 391 (565)
.++..++++|+.|+|. |+=.+| -|-||+++--.-.++
T Consensus 49 l~dp~~f~~G~~Y~i~~~~~~~F~V~ylnGVfAWG~r~~~~~~eeal 95 (102)
T PF08838_consen 49 LLDPSDFRPGEIYRIEGDPEEYFKVDYLNGVFAWGYRQNGEQEEEAL 95 (102)
T ss_dssp CS-GGGS-TT-EEEETTCCCEEEEEEEEETTEEEEEETTCECEEEEE
T ss_pred hCChhhccCCCEEEecCCCCceEEEEEEeeEEEEEeecCCCCceeee
Confidence 4566778899999987 666788 899999765555543
No 149
>smart00739 KOW KOW (Kyprides, Ouzounis, Woese) motif. Motif in ribosomal proteins, NusG, Spt5p, KIN17 and T54.
Probab=20.24 E-value=76 Score=20.07 Aligned_cols=26 Identities=27% Similarity=0.566 Sum_probs=15.8
Q ss_pred eecCCEEEEeeeeCCCCEEEEEeecCceeeeee
Q 044130 380 YRIGDVLQVTGFYNRAPQFRFICRRNVVLSIDN 412 (565)
Q Consensus 380 YriGDvV~v~gf~~~~P~i~F~gR~~~~l~i~G 412 (565)
+..||.|+|++ .. |.|+.+.++++.+
T Consensus 2 ~~~G~~V~I~~--G~-----~~g~~g~i~~i~~ 27 (28)
T smart00739 2 FEVGDTVRVIA--GP-----FKGKVGKVLEVDG 27 (28)
T ss_pred CCCCCEEEEeE--CC-----CCCcEEEEEEEcC
Confidence 45799999996 22 4455555555443
No 150
>COG0077 PheA Prephenate dehydratase [Amino acid transport and metabolism]
Probab=20.16 E-value=7.8e+02 Score=25.63 Aligned_cols=70 Identities=19% Similarity=0.184 Sum_probs=43.7
Q ss_pred EeeeeCCCCEEEEEeec------C---ceeeeeecccCHHHHHHHHHHHHhhcccCCCeEEeEEEeecCCCCCceeEEEE
Q 044130 388 VTGFYNRAPQFRFICRR------N---VVLSIDNDKTNEEDLHKSVTIAKNLLEPYSALLVEYTSYADTSTVPGHYVLYW 458 (565)
Q Consensus 388 v~gf~~~~P~i~F~gR~------~---~~l~i~GEkl~e~~v~~av~~~~~~l~~~g~~l~~f~~~~d~~~~p~~Y~l~~ 458 (565)
|.+..++.-||-.++|. + ..+-++...--+..+.+++..+. ..|+.+.-.-+. +....++.|.+|+
T Consensus 167 I~D~~~N~TRF~vl~r~~~~~~~~~~~kTsl~f~~~n~PGaL~~~L~~Fa----~~gINlTkIESR-P~k~~~~~Y~F~i 241 (279)
T COG0077 167 IEDEPNNRTRFLVLSRRKPPSVSDGPEKTSLIFSVPNKPGALYKALGVFA----KRGINLTKIESR-PLKTGLGEYLFFI 241 (279)
T ss_pred ccCCCCCeEEEEEEeccCCCCcCCCCceEEEEEEcCCCCchHHHHHHHHH----HcCcceeeEeec-ccCCCCeeEEEEE
Confidence 44445666677777762 1 33344454455667888887765 357655444333 3345889999999
Q ss_pred EEEe
Q 044130 459 EIQI 462 (565)
Q Consensus 459 e~e~ 462 (565)
+++.
T Consensus 242 D~eg 245 (279)
T COG0077 242 DIEG 245 (279)
T ss_pred EEec
Confidence 9984
Done!