BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 044131
         (784 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|225445812|ref|XP_002275298.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30700
           [Vitis vinifera]
          Length = 781

 Score = 1177 bits (3045), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 576/777 (74%), Positives = 667/777 (85%), Gaps = 4/777 (0%)

Query: 8   SRNLFLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSI 67
           +RNLFL+L+    T  QL QTHAQII++G  NDL TVTKL H+LS  KA   A  LF +I
Sbjct: 9   TRNLFLTLINRVSTLHQLNQTHAQIILNGLHNDLVTVTKLTHKLSHLKAIDQASLLFSTI 68

Query: 68  PKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIG 127
           P PDLFL+NV+IR FS N  P S++  YTHLRK+T L PDNFTY+FV+S AS+     +G
Sbjct: 69  PNPDLFLYNVLIRAFSLNNSPSSAVSLYTHLRKSTPLEPDNFTYAFVISGASS---LGLG 125

Query: 128 VLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKN 187
           +LLH H+IV+G+GSDLFVG+A+V  YFKFS V +ARKVFD M E+DTVLWN+M+SGL+KN
Sbjct: 126 LLLHAHSIVAGFGSDLFVGSAIVACYFKFSRVAAARKVFDGMLERDTVLWNTMVSGLVKN 185

Query: 188 CCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYV 247
            CF ++I +FGDMV+ GG   DST+VAAVLP VAE+Q+L LGM IQCL +K+GFH H YV
Sbjct: 186 SCFDEAILIFGDMVK-GGIGFDSTTVAAVLPGVAELQDLALGMGIQCLAMKVGFHSHAYV 244

Query: 248 LTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAE 307
           +TGL   YSKCGE+E A LLF  I +PDL+S NAMISGYTCN +TESS+RLF++LL S E
Sbjct: 245 ITGLACLYSKCGEIETARLLFGQIGQPDLVSYNAMISGYTCNNETESSVRLFKELLVSGE 304

Query: 308 RVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARK 367
           +VNSS+IVGLIPVF+PFGHLHLT CIH FC KSG+VSNSSV TAL+TVYSRLNE+E+AR 
Sbjct: 305 KVNSSSIVGLIPVFFPFGHLHLTRCIHGFCTKSGVVSNSSVSTALTTVYSRLNEIESARL 364

Query: 368 LFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGA 427
           LFDESSEKSLASWNAMI+GY QNGLTE+AISLFQEMQ  +V PNPVTV+SILSACAQLGA
Sbjct: 365 LFDESSEKSLASWNAMISGYAQNGLTEKAISLFQEMQKCEVRPNPVTVTSILSACAQLGA 424

Query: 428 ISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISG 487
           +SLGKWVH+L+   +FESNI+VSTALIDMYAKCG+I EA+ LF +M  K+ VTWN MISG
Sbjct: 425 LSLGKWVHDLINRESFESNIFVSTALIDMYAKCGSITEAQRLFSMMPEKNAVTWNAMISG 484

Query: 488 YGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKP 547
           YGLHG+G EAL LF+EMLHS + P+GVTFLSVLYACSHAGLVREGDEIF+SM+HDHGF+P
Sbjct: 485 YGLHGYGHEALNLFNEMLHSRVSPTGVTFLSVLYACSHAGLVREGDEIFRSMVHDHGFEP 544

Query: 548 LAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKL 607
           L EHYACMVD+LGRAG L+KAL+FI+ + VEPGP VWGALLGACMIHKD NLAR+AS+KL
Sbjct: 545 LPEHYACMVDLLGRAGNLDKALDFIRKMPVEPGPPVWGALLGACMIHKDANLARLASDKL 604

Query: 608 FELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSG 667
           FELDP+NVGY+VLLSNIYSA ++Y +AA+VR VVK+RKLAK PGCTLIEV  T H+FTSG
Sbjct: 605 FELDPQNVGYYVLLSNIYSAGQNYPEAASVRGVVKRRKLAKTPGCTLIEVANTLHIFTSG 664

Query: 668 DQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLI 727
           DQ HPQ+TAIYAMLEKL GKMREAGFQTET TALHDVEEEEKELM+KVHSEKLAIAFGLI
Sbjct: 665 DQSHPQATAIYAMLEKLTGKMREAGFQTETGTALHDVEEEEKELMVKVHSEKLAIAFGLI 724

Query: 728 ATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
            +EPGTEIRIIKNLRVCLDCH ATKFISK+T RVIVVRDANRFHHFK G+CSCGDYW
Sbjct: 725 TSEPGTEIRIIKNLRVCLDCHNATKFISKITERVIVVRDANRFHHFKDGICSCGDYW 781


>gi|356564895|ref|XP_003550682.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g30700-like [Glycine max]
          Length = 778

 Score = 1150 bits (2974), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 548/777 (70%), Positives = 653/777 (84%), Gaps = 5/777 (0%)

Query: 8   SRNLFLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSI 67
           SRN  L+L+  A T   L +THAQ+I +G+Q+DL+TVTKL  +L D  AT +ARALFFS+
Sbjct: 7   SRNTLLALISKACTFPHLAETHAQLIRNGYQHDLATVTKLTQKLFDVGATRHARALFFSV 66

Query: 68  PKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIG 127
           PKPD+FLFNV+I+GFS +    SSI FYTHL KNT L+PDNFTY+F +SA+    D ++G
Sbjct: 67  PKPDIFLFNVLIKGFSFSP-DASSISFYTHLLKNTTLSPDNFTYAFAISASP---DDNLG 122

Query: 128 VLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKN 187
           + LH HA+V G+ S+LFV +ALVDLY KFS V  ARKVFDKMP++DTVLWN+MI+GL++N
Sbjct: 123 MCLHAHAVVDGFDSNLFVASALVDLYCKFSRVAYARKVFDKMPDRDTVLWNTMITGLVRN 182

Query: 188 CCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYV 247
           CC+ DS+ VF DMV  G   LDST+VA VLPAVAE+QE+++GM IQCL LKLGFH   YV
Sbjct: 183 CCYDDSVQVFKDMVAQG-VRLDSTTVATVLPAVAEMQEVKVGMGIQCLALKLGFHFDDYV 241

Query: 248 LTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAE 307
           LTGL+S +SKC +V+ A LLF  I +PDL+S NA+ISG++CNG+TE +++ FR+LL S +
Sbjct: 242 LTGLISVFSKCEDVDTARLLFGMIRKPDLVSYNALISGFSCNGETECAVKYFRELLVSGQ 301

Query: 308 RVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARK 367
           RV+SST+VGLIPV  PFGHLHL  CI  FC+KSG +   SV TAL+T+YSRLNE++ AR+
Sbjct: 302 RVSSSTMVGLIPVSSPFGHLHLACCIQGFCVKSGTILQPSVSTALTTIYSRLNEIDLARQ 361

Query: 368 LFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGA 427
           LFDESSEK++A+WNAMI+GY Q+GLTE AISLFQEM  ++  PNPVT++SILSACAQLGA
Sbjct: 362 LFDESSEKTVAAWNAMISGYAQSGLTEMAISLFQEMMTTEFTPNPVTITSILSACAQLGA 421

Query: 428 ISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISG 487
           +S GK VH+L+KS+N E NIYVSTALIDMYAKCGNI EA +LFDL S K+ VTWNTMI G
Sbjct: 422 LSFGKSVHQLIKSKNLEQNIYVSTALIDMYAKCGNISEASQLFDLTSEKNTVTWNTMIFG 481

Query: 488 YGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKP 547
           YGLHG+G EAL+LF+EMLH G +PS VTFLSVLYACSHAGLVREGDEIF +M++ +  +P
Sbjct: 482 YGLHGYGDEALKLFNEMLHLGFQPSSVTFLSVLYACSHAGLVREGDEIFHAMVNKYRIEP 541

Query: 548 LAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKL 607
           LAEHYACMVDILGRAGQLEKALEFI+ + VEPGPAVWG LLGACMIHKDTNLARVASE+L
Sbjct: 542 LAEHYACMVDILGRAGQLEKALEFIRKMPVEPGPAVWGTLLGACMIHKDTNLARVASERL 601

Query: 608 FELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSG 667
           FELDP NVGY+VLLSNIYS ER++ +AA+VR+ VKKR L+K PGCTLIEV GTPHVF  G
Sbjct: 602 FELDPGNVGYYVLLSNIYSVERNFPKAASVREAVKKRNLSKTPGCTLIEVNGTPHVFVCG 661

Query: 668 DQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLI 727
           D+ H Q+T+IYA LE+L GKMRE G+Q+ETVTALHDVEEEEKELM  VHSEKLAIAFGLI
Sbjct: 662 DRSHSQTTSIYAKLEELTGKMREMGYQSETVTALHDVEEEEKELMFNVHSEKLAIAFGLI 721

Query: 728 ATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
            TEPGTEIRIIKNLRVCLDCH ATKFISK+T RVIVVRDANRFHHFK G+CSCGDYW
Sbjct: 722 TTEPGTEIRIIKNLRVCLDCHAATKFISKITERVIVVRDANRFHHFKDGICSCGDYW 778


>gi|357479991|ref|XP_003610281.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355511336|gb|AES92478.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 783

 Score = 1134 bits (2934), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 541/777 (69%), Positives = 644/777 (82%), Gaps = 4/777 (0%)

Query: 8   SRNLFLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSI 67
           SRN   SL+  A T   L QTHAQ I++G++ DL+T+TKL  +L DF AT +ARALFFS+
Sbjct: 11  SRNTLFSLINKASTFPHLAQTHAQFILNGYRFDLATLTKLTQKLFDFSATRHARALFFSV 70

Query: 68  PKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIG 127
           PKPD+FLFNV++RGFS N+ P SSI  YTHLR+NT L+PDNFTY+F   A +AC +    
Sbjct: 71  PKPDIFLFNVLVRGFSLNDSPSSSISLYTHLRRNTNLSPDNFTYAF---AVAACSNDKHL 127

Query: 128 VLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKN 187
           +LLH H+I+ GYGS++FVG+ALVDLY KFS V  ARKVFD MPE+DTVLWN+MI+GL+KN
Sbjct: 128 MLLHAHSIIDGYGSNVFVGSALVDLYCKFSRVVYARKVFDGMPERDTVLWNTMINGLVKN 187

Query: 188 CCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYV 247
           CCF DSI +F +MV +G   +DS++V AVLPA AE+QEL++GM IQCL LK+GF    YV
Sbjct: 188 CCFDDSIQLFREMVADG-VRVDSSTVTAVLPAAAELQELKVGMGIQCLALKIGFGFCDYV 246

Query: 248 LTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAE 307
           LTGL+S YSKCG+V  A LLFR I RPDLI+ NAMISG+T NG TE S++LFR+LL S E
Sbjct: 247 LTGLISLYSKCGDVNTARLLFRRINRPDLIAYNAMISGFTANGGTECSVKLFRELLFSGE 306

Query: 308 RVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARK 367
           RV+SSTIVGLIP+  PFGHLHL   IH FC+KSGI+ N +V TA + +Y++LNE++ AR 
Sbjct: 307 RVSSSTIVGLIPLHSPFGHLHLACSIHGFCVKSGIILNPTVSTAFTAIYNKLNEIDLARH 366

Query: 368 LFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGA 427
           LFDES EK++ +WNAMI+GYTQNG TE AISLF+EM  ++  PN VT+++ILSACAQLG+
Sbjct: 367 LFDESPEKTVVAWNAMISGYTQNGSTETAISLFKEMMKTEFTPNAVTITTILSACAQLGS 426

Query: 428 ISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISG 487
           +S GKWVH L+KS N E NIYVSTAL+DMYAKCGNI EA +LFD MS K+ VTWNTMI G
Sbjct: 427 LSFGKWVHHLIKSENLEPNIYVSTALVDMYAKCGNISEAWQLFDSMSEKNTVTWNTMIFG 486

Query: 488 YGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKP 547
           YGLHG+G EAL+L++EMLH G  PS VTFLSVLYACSHAGLV EG+EIF +M++ +  +P
Sbjct: 487 YGLHGYGHEALKLYNEMLHLGYNPSAVTFLSVLYACSHAGLVGEGEEIFHNMVNKYRIEP 546

Query: 548 LAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKL 607
           L EHYACMVDILGR+GQLEKALEFIK + VEPGPAVWG LLGACMIHKDT++AR+ASE+L
Sbjct: 547 LIEHYACMVDILGRSGQLEKALEFIKKMPVEPGPAVWGTLLGACMIHKDTDIARLASERL 606

Query: 608 FELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSG 667
           FELDP +VGY+VLLSNIYS ER++ +AA++RQVVKKRKLAK+PGCTLIEV GTPHVF SG
Sbjct: 607 FELDPGSVGYYVLLSNIYSVERNFPKAASIRQVVKKRKLAKSPGCTLIEVNGTPHVFVSG 666

Query: 668 DQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLI 727
           D+ H  +T IYA LEKL GKMRE G+Q ETV ALHDVEEEEKEL + VHSEKLAIAFGLI
Sbjct: 667 DRSHSHATDIYAKLEKLTGKMREMGYQAETVPALHDVEEEEKELAVNVHSEKLAIAFGLI 726

Query: 728 ATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
            TEPG EIRIIKNLRVCLDCHTATKFISK+T RVIVVRDANRFHHFK G+CSCGDYW
Sbjct: 727 TTEPGNEIRIIKNLRVCLDCHTATKFISKITERVIVVRDANRFHHFKDGICSCGDYW 783


>gi|449470293|ref|XP_004152852.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g30700-like [Cucumis sativus]
          Length = 788

 Score = 1133 bits (2930), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 542/779 (69%), Positives = 644/779 (82%), Gaps = 3/779 (0%)

Query: 7   QSRNLFLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFS 66
           + +  FL+LL  A T SQL Q  AQ+I+HG   DLS++TKL H+  D  A  + R LF  
Sbjct: 12  RGQRFFLTLLNNATTLSQLLQIQAQLILHGIHYDLSSITKLTHKFFDLGAVAHVRQLFNK 71

Query: 67  IPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSI 126
           + KPDLFLFNV+IRGFS+N +PKSSI  YTHLRK T L PDNFTY+F +SAAS   D  +
Sbjct: 72  VSKPDLFLFNVLIRGFSDNGLPKSSIFLYTHLRKKTNLRPDNFTYAFAISAASRLEDERV 131

Query: 127 GVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMK 186
           GVLLH H+IV G  S+LFVG+A+VDLYFKF+  + ARKVFD MPE+DTVLWN+MISG  +
Sbjct: 132 GVLLHAHSIVDGVASNLFVGSAIVDLYFKFTRAELARKVFDVMPERDTVLWNTMISGFSR 191

Query: 187 NCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVY 246
           N  F+DSI VF DM+ + G   DST++A VL AVAE+QE RLGM IQCL  K G H  VY
Sbjct: 192 NSYFEDSIRVFVDML-DVGLSFDSTTLATVLTAVAELQEYRLGMGIQCLASKKGLHSDVY 250

Query: 247 VLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASA 306
           VLTGL+S YSKCG+  +  +LF  I +PDLIS NAMISGYT N +TES++ LFR+LLAS 
Sbjct: 251 VLTGLISLYSKCGKSCKGRILFDQIDQPDLISYNAMISGYTFNHETESAVTLFRELLASG 310

Query: 307 ERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAAR 366
           +RVNSST+VGLIPV+ PF HL L+  I +  LK GI+   SV TAL+TVY RLNE++ AR
Sbjct: 311 QRVNSSTLVGLIPVYLPFNHLQLSRLIQNLSLKIGIILQPSVSTALTTVYCRLNEVQFAR 370

Query: 367 KLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLG 426
           +LFDES EKSLASWNAMI+GYTQNGLT+ AISLFQEM   +++PNPVTV+SILSACAQLG
Sbjct: 371 QLFDESPEKSLASWNAMISGYTQNGLTDRAISLFQEMMP-QLSPNPVTVTSILSACAQLG 429

Query: 427 AISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMIS 486
           A+S+GKWVH L+KS   ESN+YVSTAL+DMYAKCG+IVEAR+LFDLM  K+ VTWN MI+
Sbjct: 430 ALSIGKWVHGLIKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLMVDKNVVTWNAMIT 489

Query: 487 GYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFK 546
           GYGLHGHG EAL+LF EML SGI P+GVTFLS+LYACSH+GLV EG+EIF SM +++GF+
Sbjct: 490 GYGLHGHGKEALKLFYEMLQSGIPPTGVTFLSILYACSHSGLVSEGNEIFHSMANNYGFQ 549

Query: 547 PLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEK 606
           P++EHYACMVDILGRAGQL  ALEFI+ + +EPGPAVWGALLGACMIHK+T +A VAS++
Sbjct: 550 PMSEHYACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNTEMANVASKR 609

Query: 607 LFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTS 666
           LF+LDPENVGY+VLLSNIYS +R++ +AA+VRQVVKKRKLAK PGCTLIE+    +VFTS
Sbjct: 610 LFQLDPENVGYYVLLSNIYSTDRNFPKAASVRQVVKKRKLAKTPGCTLIEIDDQQYVFTS 669

Query: 667 GDQLHPQSTAIYAMLEKLNGKMREAGFQTETV-TALHDVEEEEKELMMKVHSEKLAIAFG 725
           GD+ HPQ+TAI+ MLEKL GKMREAG+Q ETV TALHDVE+EEKELM+ VHSEKLAIAFG
Sbjct: 670 GDRSHPQATAIFEMLEKLTGKMREAGYQAETVTTALHDVEDEEKELMVNVHSEKLAIAFG 729

Query: 726 LIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           LI+T+PGTEIRIIKNLRVCLDCHTATKFISK+T RVIVVRDANRFHHFK G+CSCGDYW
Sbjct: 730 LISTKPGTEIRIIKNLRVCLDCHTATKFISKITERVIVVRDANRFHHFKNGICSCGDYW 788


>gi|449507535|ref|XP_004163058.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g30700-like [Cucumis sativus]
          Length = 788

 Score = 1132 bits (2929), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 542/779 (69%), Positives = 644/779 (82%), Gaps = 3/779 (0%)

Query: 7   QSRNLFLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFS 66
           + +  FL+LL  A T SQL Q  AQ+I+HG   DLS++TKL H+  D  A  + R LF  
Sbjct: 12  RGQRFFLTLLNNATTLSQLLQIQAQLILHGIHYDLSSITKLTHKFFDLGAVAHVRQLFNK 71

Query: 67  IPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSI 126
           + KPDLFLFNV+IRGFS+N +PKSSI  YTHLRK T L PDNFTY+F +SAAS   D  +
Sbjct: 72  VSKPDLFLFNVLIRGFSDNGLPKSSIFLYTHLRKXTNLRPDNFTYAFAISAASRLEDERV 131

Query: 127 GVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMK 186
           GVLLH H+IV G  S+LFVG+A+VDLYFKF+  + ARKVFD MPE+DTVLWN+MISG  +
Sbjct: 132 GVLLHAHSIVDGVASNLFVGSAIVDLYFKFTRAELARKVFDVMPERDTVLWNTMISGFSR 191

Query: 187 NCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVY 246
           N  F+DSI VF DM+ + G   DST++A VL AVAE+QE RLGM IQCL  K G H  VY
Sbjct: 192 NSYFEDSIRVFVDML-DVGLSFDSTTLATVLTAVAELQEYRLGMGIQCLASKKGLHSDVY 250

Query: 247 VLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASA 306
           VLTGL+S YSKCG+  +  +LF  I +PDLIS NAMISGYT N +TES++ LFR+LLAS 
Sbjct: 251 VLTGLISLYSKCGKSCKGRILFDQIDQPDLISYNAMISGYTFNHETESAVTLFRELLASG 310

Query: 307 ERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAAR 366
           +RVNSST+VGLIPV+ PF HL L+  I +  LK GI+   SV TAL+TVY RLNE++ AR
Sbjct: 311 QRVNSSTLVGLIPVYLPFNHLQLSRLIQNLSLKIGIILQPSVSTALTTVYCRLNEVQFAR 370

Query: 367 KLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLG 426
           +LFDES EKSLASWNAMI+GYTQNGLT+ AISLFQEM   +++PNPVTV+SILSACAQLG
Sbjct: 371 QLFDESPEKSLASWNAMISGYTQNGLTDRAISLFQEMMP-QLSPNPVTVTSILSACAQLG 429

Query: 427 AISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMIS 486
           A+S+GKWVH L+KS   ESN+YVSTAL+DMYAKCG+IVEAR+LFDLM  K+ VTWN MI+
Sbjct: 430 ALSIGKWVHGLIKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLMVDKNVVTWNAMIT 489

Query: 487 GYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFK 546
           GYGLHGHG EAL+LF EML SGI P+GVTFLS+LYACSH+GLV EG+EIF SM +++GF+
Sbjct: 490 GYGLHGHGKEALKLFYEMLQSGIPPTGVTFLSILYACSHSGLVSEGNEIFHSMANNYGFQ 549

Query: 547 PLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEK 606
           P++EHYACMVDILGRAGQL  ALEFI+ + +EPGPAVWGALLGACMIHK+T +A VAS++
Sbjct: 550 PMSEHYACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNTEMANVASKR 609

Query: 607 LFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTS 666
           LF+LDPENVGY+VLLSNIYS +R++ +AA+VRQVVKKRKLAK PGCTLIE+    +VFTS
Sbjct: 610 LFQLDPENVGYYVLLSNIYSTDRNFPKAASVRQVVKKRKLAKTPGCTLIEIDDQQYVFTS 669

Query: 667 GDQLHPQSTAIYAMLEKLNGKMREAGFQTETV-TALHDVEEEEKELMMKVHSEKLAIAFG 725
           GD+ HPQ+TAI+ MLEKL GKMREAG+Q ETV TALHDVE+EEKELM+ VHSEKLAIAFG
Sbjct: 670 GDRSHPQATAIFEMLEKLTGKMREAGYQAETVTTALHDVEDEEKELMVNVHSEKLAIAFG 729

Query: 726 LIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           LI+T+PGTEIRIIKNLRVCLDCHTATKFISK+T RVIVVRDANRFHHFK G+CSCGDYW
Sbjct: 730 LISTKPGTEIRIIKNLRVCLDCHTATKFISKITERVIVVRDANRFHHFKNGICSCGDYW 788


>gi|297798898|ref|XP_002867333.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297313169|gb|EFH43592.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 792

 Score = 1104 bits (2855), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 526/777 (67%), Positives = 634/777 (81%), Gaps = 3/777 (0%)

Query: 8   SRNLFLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSI 67
           S+N FL L K + + S L QTHAQI++HGF+ND+S +TKL  RLSD  A  YAR +F S+
Sbjct: 19  SKNNFLDLFKRSTSISHLAQTHAQIVLHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSV 78

Query: 68  PKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIG 127
            +PD+FLFNV++RGFS NE P SS+  + HLRK+T L P++ TY+F +SAAS   D   G
Sbjct: 79  QRPDVFLFNVLMRGFSVNESPHSSLAVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAG 138

Query: 128 VLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKN 187
            ++HG AIV G  S+L +G+ +V +YFKF  V+ ARKVFD+MPEKDT+LWN+MISG  KN
Sbjct: 139 CVIHGQAIVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKN 198

Query: 188 CCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYV 247
             + +SI VF D++    T LD+T++  +LPAVAE+QELRLGM+I  L  K G + H YV
Sbjct: 199 EMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYV 258

Query: 248 LTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAE 307
           LTG +S YSKCG+++ A  LFR+  RPD+++ NAMI GYT NG+TE SL LF++L+ S  
Sbjct: 259 LTGFISLYSKCGKIKMASTLFREFRRPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGA 318

Query: 308 RVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARK 367
           ++ SST+V L+PV    GHL L   IH + LKS  +S++SV TAL+TVYS+LNE+E+ARK
Sbjct: 319 KLKSSTLVSLVPVS---GHLMLIYAIHGYSLKSNFLSHTSVSTALTTVYSKLNEIESARK 375

Query: 368 LFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGA 427
           LFDES EKSL SWNAMI+GYTQNGLTE+AISLF+EMQ S+ +PNPVT++ ILSACAQLGA
Sbjct: 376 LFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQNSEFSPNPVTITCILSACAQLGA 435

Query: 428 ISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISG 487
           +SLGKWVH+LV+S +FES+IYVSTALI MYAKCG+I EAR LFD M  K+EVTWNTMISG
Sbjct: 436 LSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDFMPKKNEVTWNTMISG 495

Query: 488 YGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKP 547
           YGLHGHG EAL +FSEML+SGI P+ VTFL VLYACSHAGLV+EGDEIF SMIH +GF+P
Sbjct: 496 YGLHGHGQEALTIFSEMLNSGIAPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEP 555

Query: 548 LAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKL 607
             +HYAC+VDILGRAG L++AL+FI+ + ++PGP+VW  LLGAC IHKDTNLAR  SEKL
Sbjct: 556 SVKHYACVVDILGRAGHLQRALQFIEAMPIQPGPSVWETLLGACRIHKDTNLARTVSEKL 615

Query: 608 FELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSG 667
           FELDP+NVGYHVLLSNI+SA+R+Y QAATVRQ  KKRKLAKAPG TLIE+G TPHVFTSG
Sbjct: 616 FELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSG 675

Query: 668 DQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLI 727
           DQ HPQ  AI+  LEKL GKMREAG+Q ET  ALHDVEEEE+ELM+KVHSE+LAIAFGLI
Sbjct: 676 DQSHPQVKAIHEKLEKLEGKMREAGYQPETELALHDVEEEERELMVKVHSERLAIAFGLI 735

Query: 728 ATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           ATEPGTEIRIIKNLRVCLDCHTATK ISK+T RVIVVRDANRFHHFK GVCSCGDYW
Sbjct: 736 ATEPGTEIRIIKNLRVCLDCHTATKLISKITERVIVVRDANRFHHFKDGVCSCGDYW 792


>gi|15234831|ref|NP_194799.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75208664|sp|Q9SUH6.1|PP341_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g30700; AltName: Full=Protein DYW9
 gi|5725434|emb|CAB52443.1| putative protein [Arabidopsis thaliana]
 gi|7269971|emb|CAB79788.1| putative protein [Arabidopsis thaliana]
 gi|332660398|gb|AEE85798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 792

 Score = 1103 bits (2852), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 523/777 (67%), Positives = 631/777 (81%), Gaps = 3/777 (0%)

Query: 8   SRNLFLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSI 67
           S+N +L   K + + S L QTHAQII+HGF+ND+S +TKL  RLSD  A  YAR +F S+
Sbjct: 19  SKNTYLDFFKRSTSISHLAQTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSV 78

Query: 68  PKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIG 127
            +PD+FLFNV++RGFS NE P SS+  + HLRK+T L P++ TY+F +SAAS   D   G
Sbjct: 79  QRPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAG 138

Query: 128 VLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKN 187
            ++HG A+V G  S+L +G+ +V +YFKF  V+ ARKVFD+MPEKDT+LWN+MISG  KN
Sbjct: 139 RVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKN 198

Query: 188 CCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYV 247
             + +SI VF D++    T LD+T++  +LPAVAE+QELRLGM+I  L  K G + H YV
Sbjct: 199 EMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYV 258

Query: 248 LTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAE 307
           LTG +S YSKCG+++    LFR+  +PD+++ NAMI GYT NG+TE SL LF++L+ S  
Sbjct: 259 LTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGA 318

Query: 308 RVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARK 367
           R+ SST+V L+PV    GHL L   IH +CLKS  +S++SV TAL+TVYS+LNE+E+ARK
Sbjct: 319 RLRSSTLVSLVPVS---GHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARK 375

Query: 368 LFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGA 427
           LFDES EKSL SWNAMI+GYTQNGLTE+AISLF+EMQ S+ +PNPVT++ ILSACAQLGA
Sbjct: 376 LFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGA 435

Query: 428 ISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISG 487
           +SLGKWVH+LV+S +FES+IYVSTALI MYAKCG+I EAR LFDLM+ K+EVTWNTMISG
Sbjct: 436 LSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISG 495

Query: 488 YGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKP 547
           YGLHG G EAL +F EML+SGI P+ VTFL VLYACSHAGLV+EGDEIF SMIH +GF+P
Sbjct: 496 YGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEP 555

Query: 548 LAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKL 607
             +HYACMVDILGRAG L++AL+FI+ +++EPG +VW  LLGAC IHKDTNLAR  SEKL
Sbjct: 556 SVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKL 615

Query: 608 FELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSG 667
           FELDP+NVGYHVLLSNI+SA+R+Y QAATVRQ  KKRKLAKAPG TLIE+G TPHVFTSG
Sbjct: 616 FELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSG 675

Query: 668 DQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLI 727
           DQ HPQ   IY  LEKL GKMREAG+Q ET  ALHDVEEEE+ELM+KVHSE+LAIAFGLI
Sbjct: 676 DQSHPQVKEIYEKLEKLEGKMREAGYQPETELALHDVEEEERELMVKVHSERLAIAFGLI 735

Query: 728 ATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           ATEPGTEIRIIKNLRVCLDCHT TK ISK+T RVIVVRDANRFHHFK GVCSCGDYW
Sbjct: 736 ATEPGTEIRIIKNLRVCLDCHTVTKLISKITERVIVVRDANRFHHFKDGVCSCGDYW 792


>gi|224091821|ref|XP_002309359.1| predicted protein [Populus trichocarpa]
 gi|222855335|gb|EEE92882.1| predicted protein [Populus trichocarpa]
          Length = 605

 Score =  978 bits (2529), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 463/605 (76%), Positives = 527/605 (87%)

Query: 180 MISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKL 239
           MISG +KN CF+DSI VFGDMV   G   D T+V AVLPAVAE+QEL+LGM+I CL +K 
Sbjct: 1   MISGFVKNSCFEDSIRVFGDMVLGNGPRFDLTTVIAVLPAVAELQELKLGMQILCLAIKC 60

Query: 240 GFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLF 299
           GF+ HV +LTGL+S +SKCGEVE A LLF +I + DLISCNAMISG+TCNG+TE S+RLF
Sbjct: 61  GFYSHVSLLTGLISLFSKCGEVEIARLLFGEIRKKDLISCNAMISGFTCNGETEDSVRLF 120

Query: 300 RQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRL 359
           ++LL+S ERV+SSTIVGLIPV+ PFGH +L NCIH FC+K GIVS+SSV TAL+TVY RL
Sbjct: 121 KELLSSGERVSSSTIVGLIPVYSPFGHSYLCNCIHGFCVKLGIVSHSSVSTALTTVYCRL 180

Query: 360 NEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSIL 419
           NEM  AR+LFDES+EK+LASWNAMI+G TQNGLT+ AISLFQ MQ + V PNPVTV+SIL
Sbjct: 181 NEMIFARQLFDESAEKTLASWNAMISGCTQNGLTDAAISLFQTMQKNNVNPNPVTVTSIL 240

Query: 420 SACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEV 479
           SACAQ+GA+SLG+WVH L+KS  FESN+YVSTALIDMYAKCG+I  ARELFDLM  K+EV
Sbjct: 241 SACAQIGALSLGEWVHSLIKSNRFESNVYVSTALIDMYAKCGSITVARELFDLMPEKNEV 300

Query: 480 TWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSM 539
           TWN MISGYGLHGHG EAL+LF +ML S ++P+G+TFLSVLYACSHAGLV+EGD IF +M
Sbjct: 301 TWNAMISGYGLHGHGQEALKLFYDMLSSSVKPTGLTFLSVLYACSHAGLVKEGDGIFHTM 360

Query: 540 IHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNL 599
           +HD GF+PLAEHYACMVDILGRAGQL+KALEFIK + VEPGP VWGALLGACMIHKDTNL
Sbjct: 361 VHDFGFEPLAEHYACMVDILGRAGQLKKALEFIKAMPVEPGPPVWGALLGACMIHKDTNL 420

Query: 600 ARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGG 659
           A VASEKLFELDPEN+GY+VL+SNIYS ER Y QAA+VRQV KK++LAK PGCTLIE+G 
Sbjct: 421 AHVASEKLFELDPENIGYYVLMSNIYSVERKYPQAASVRQVAKKKRLAKTPGCTLIEIGQ 480

Query: 660 TPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEK 719
            PHVFTSGDQ HPQS AIYA L+KL GKM EAGFQTET T LHD+EEEEKEL MKVHSEK
Sbjct: 481 VPHVFTSGDQSHPQSKAIYAELDKLTGKMTEAGFQTETTTVLHDLEEEEKELTMKVHSEK 540

Query: 720 LAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCS 779
           LAIAFGLI+TEPG EIRIIKNLRVCLDCH  TKF+SK+T RVIVVRDANRFHHFK G+CS
Sbjct: 541 LAIAFGLISTEPGAEIRIIKNLRVCLDCHNWTKFLSKITKRVIVVRDANRFHHFKDGLCS 600

Query: 780 CGDYW 784
           CGDYW
Sbjct: 601 CGDYW 605



 Score =  165 bits (417), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 120/416 (28%), Positives = 200/416 (48%), Gaps = 3/416 (0%)

Query: 78  IIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVS 137
           +I GF  N   + SI  +  +        D  T   VL A +   +  +G+ +   AI  
Sbjct: 1   MISGFVKNSCFEDSIRVFGDMVLGNGPRFDLTTVIAVLPAVAELQELKLGMQILCLAIKC 60

Query: 138 GYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVF 197
           G+ S + +   L+ L+ K   V+ AR +F ++ +KD +  N+MISG   N   +DS+ +F
Sbjct: 61  GFYSHVSLLTGLISLFSKCGEVEIARLLFGEIRKKDLISCNAMISGFTCNGETEDSVRLF 120

Query: 198 GDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSK 257
            +++ + G  + S+++  ++P  +      L   I    +KLG   H  V T L + Y +
Sbjct: 121 KELL-SSGERVSSSTIVGLIPVYSPFGHSYLCNCIHGFCVKLGIVSHSSVSTALTTVYCR 179

Query: 258 CGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGL 317
             E+  A  LF +     L S NAMISG T NG T++++ LF+ +  +    N  T+  +
Sbjct: 180 LNEMIFARQLFDESAEKTLASWNAMISGCTQNGLTDAAISLFQTMQKNNVNPNPVTVTSI 239

Query: 318 IPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSL 377
           +      G L L   +HS    +   SN  V TAL  +Y++   +  AR+LFD   EK+ 
Sbjct: 240 LSACAQIGALSLGEWVHSLIKSNRFESNVYVSTALIDMYAKCGSITVARELFDLMPEKNE 299

Query: 378 ASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWV-HE 436
            +WNAMI+GY  +G  +EA+ LF +M +S V P  +T  S+L AC+  G +  G  + H 
Sbjct: 300 VTWNAMISGYGLHGHGQEALKLFYDMLSSSVKPTGLTFLSVLYACSHAGLVKEGDGIFHT 359

Query: 437 LVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMS-HKSEVTWNTMISGYGLH 491
           +V    FE        ++D+  + G + +A E    M        W  ++    +H
Sbjct: 360 MVHDFGFEPLAEHYACMVDILGRAGQLKKALEFIKAMPVEPGPPVWGALLGACMIH 415



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 54/174 (31%), Positives = 90/174 (51%), Gaps = 7/174 (4%)

Query: 34  IHGFQNDLSTV------TKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNEM 87
           IHGF   L  V      T L           +AR LF    +  L  +N +I G + N +
Sbjct: 154 IHGFCVKLGIVSHSSVSTALTTVYCRLNEMIFARQLFDESAEKTLASWNAMISGCTQNGL 213

Query: 88  PKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGA 147
             ++I  +  ++KN  + P+  T + +LSA +     S+G  +H     + + S+++V  
Sbjct: 214 TDAAISLFQTMQKNN-VNPNPVTVTSILSACAQIGALSLGEWVHSLIKSNRFESNVYVST 272

Query: 148 ALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMV 201
           AL+D+Y K   +  AR++FD MPEK+ V WN+MISG   +   Q+++ +F DM+
Sbjct: 273 ALIDMYAKCGSITVARELFDLMPEKNEVTWNAMISGYGLHGHGQEALKLFYDML 326


>gi|297743669|emb|CBI36552.3| unnamed protein product [Vitis vinifera]
          Length = 726

 Score =  976 bits (2523), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 506/778 (65%), Positives = 597/778 (76%), Gaps = 61/778 (7%)

Query: 8   SRNLFLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSI 67
           +RNLFL+L+    T  QL QTHAQII++G  NDL TVTKL H+LS  KA   A  LF +I
Sbjct: 9   TRNLFLTLINRVSTLHQLNQTHAQIILNGLHNDLVTVTKLTHKLSHLKAIDQASLLFSTI 68

Query: 68  PKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIG 127
           P PDLFL+NV+IR FS N  P S++  YTHLRK+T L PDNFTY+FV+S AS+     +G
Sbjct: 69  PNPDLFLYNVLIRAFSLNNSPSSAVSLYTHLRKSTPLEPDNFTYAFVISGASS---LGLG 125

Query: 128 VLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKN 187
           +LLH H+IV+G+GSDLFVG+A+V  YFKFS V +ARKVFD M E+DTVLWN+M+SGL+KN
Sbjct: 126 LLLHAHSIVAGFGSDLFVGSAIVACYFKFSRVAAARKVFDGMLERDTVLWNTMVSGLVKN 185

Query: 188 CCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYV 247
            CF ++I +FGDMV+ GG   DST+VAAVLP VAE+Q+L LGM IQCL +K+GFH H YV
Sbjct: 186 SCFDEAILIFGDMVK-GGIGFDSTTVAAVLPGVAELQDLALGMGIQCLAMKVGFHSHAYV 244

Query: 248 LTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAE 307
           +TGL   YSKCGE+E A LLF  I +PDL+S NAMISGYTCN +TESS+RLF++LL S E
Sbjct: 245 ITGLACLYSKCGEIETARLLFGQIGQPDLVSYNAMISGYTCNNETESSVRLFKELLVSGE 304

Query: 308 RVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARK 367
           +VNSS+IVGLIPVF+PFGHLHLT CIH FC KSG+VSNSSV TAL+TVYSRLNE+E+AR 
Sbjct: 305 KVNSSSIVGLIPVFFPFGHLHLTRCIHGFCTKSGVVSNSSVSTALTTVYSRLNEIESARL 364

Query: 368 LFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGA 427
           LFDESSEKSLASWNAMI+GY QNGLTE+AISLFQEMQ  +V PNPVTV+SILSACAQLGA
Sbjct: 365 LFDESSEKSLASWNAMISGYAQNGLTEKAISLFQEMQKCEVRPNPVTVTSILSACAQLGA 424

Query: 428 ISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISG 487
           +SLGKWVH+L+   +FESNI++  + +                      + VT+ +++  
Sbjct: 425 LSLGKWVHDLINRESFESNIFMLHSRVS--------------------PTGVTFLSVLYA 464

Query: 488 YGLHGHGLEALQLFSEMLHS-GIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFK 546
               G   E  ++F  M+H  G  P     L   YAC                       
Sbjct: 465 CSHAGLVREGDEIFRSMVHDHGFEP-----LPEHYAC----------------------- 496

Query: 547 PLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEK 606
                   MVD+LGRAG L+KAL+FI+ + VEPGP VWGALLGACMIHKD NLAR+AS+K
Sbjct: 497 --------MVDLLGRAGNLDKALDFIRKMPVEPGPPVWGALLGACMIHKDANLARLASDK 548

Query: 607 LFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTS 666
           LFELDP+NVGY+VLLSNIYSA ++Y +AA+VR VVK+RKLAK PGCTLIEV  T H+FTS
Sbjct: 549 LFELDPQNVGYYVLLSNIYSAGQNYPEAASVRGVVKRRKLAKTPGCTLIEVANTLHIFTS 608

Query: 667 GDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGL 726
           GDQ HPQ+TAIYAMLEKL GKMREAGFQTET TALHDVEEEEKELM+KVHSEKLAIAFGL
Sbjct: 609 GDQSHPQATAIYAMLEKLTGKMREAGFQTETGTALHDVEEEEKELMVKVHSEKLAIAFGL 668

Query: 727 IATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           I +EPGTEIRIIKNLRVCLDCH ATKFISK+T RVIVVRDANRFHHFK G+CSCGDYW
Sbjct: 669 ITSEPGTEIRIIKNLRVCLDCHNATKFISKITERVIVVRDANRFHHFKDGICSCGDYW 726


>gi|413952892|gb|AFW85541.1| hypothetical protein ZEAMMB73_780855 [Zea mays]
          Length = 787

 Score =  829 bits (2142), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 415/785 (52%), Positives = 549/785 (69%), Gaps = 26/785 (3%)

Query: 9   RNLFLSLLKGAKTQSQLTQTHAQIIIHG-FQNDLSTVTKLAHRLSDFKAT-CYARALFFS 66
           R  +L L+  + T   L Q  A  +  G +  D +  T L  R +  +A   +   LF +
Sbjct: 20  RRSYLRLVALSSTPRHLDQLLAVSLASGHYALDPAPATALLLRYASLRAPPSHLLRLFRA 79

Query: 67  IPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTAL-TPDNFTYSFVLSAASACC--- 122
            P PD FL N ++R   +             LR +    +PD+F+++F  ++ S+ C   
Sbjct: 80  FPCPDRFLRNALLRSLPS-------------LRPHLLFPSPDSFSFAFAATSLSSSCSSR 126

Query: 123 --DRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSM 180
             D +    LHG ++ +GY +D FV +AL  LYFK S    ARKVFD +P  DT+LWN++
Sbjct: 127 GNDAAAARTLHGLSVAAGYAADTFVASALAKLYFKLSRGDDARKVFDTVPSPDTILWNTL 186

Query: 181 ISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLG 240
           ++GL  +    +++  F  MV  G    DST++A+ L A AE   + +G  +   G+K G
Sbjct: 187 LAGLPGS----EALEAFVRMVDAGRVRPDSTTLASSLRAAAEASHMAMGRCVHGYGVKCG 242

Query: 241 FHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFR 300
             +H +V+TGL+S YSKCG+++ A+ LF  +  PDL++ NA+ISGY+ NG  ESS+ LF+
Sbjct: 243 LAEHEHVVTGLMSLYSKCGDMDSAQFLFDRMDNPDLVAYNALISGYSVNGMVESSVELFK 302

Query: 301 QLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLN 360
           +L AS  R NSST+V +IPV+ PFGH  L  C+H+F +K+ + +++ V TAL+T+Y RLN
Sbjct: 303 ELTASGWRPNSSTLVAVIPVYSPFGHELLARCLHAFVVKARLDADALVSTALTTLYCRLN 362

Query: 361 EMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILS 420
           +ME+AR +FD   EK++ SWNAMI+GY QNGLTE A++LFQ MQ   V PNP+T+SS LS
Sbjct: 363 DMESARSIFDAMLEKTMESWNAMISGYAQNGLTEMAVALFQLMQELNVQPNPITISSTLS 422

Query: 421 ACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVT 480
           ACA LGA+SLGKWVH ++     E N+YV TALIDMYAKCG+I EAR +FD M +K+ V+
Sbjct: 423 ACAHLGALSLGKWVHRIISKEKLELNVYVMTALIDMYAKCGSIAEARSIFDRMDNKNVVS 482

Query: 481 WNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMI 540
           WN MISGYGLHG G EAL+L+ +ML + I P+  TFLSV+YACSH GLV EG ++F+ M 
Sbjct: 483 WNAMISGYGLHGQGAEALKLYKDMLDARILPTSSTFLSVIYACSHGGLVDEGQKVFRVMT 542

Query: 541 HDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEP-GPAVWGALLGACMIHKDTNL 599
           +++   P  EH  CMVD+LGRAG+L +ALE I        GP VWGALLGACM+HK+++L
Sbjct: 543 NEYRITPGIEHCTCMVDLLGRAGKLNEALELISEFPQSAIGPGVWGALLGACMVHKNSDL 602

Query: 600 ARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGG 659
           A++AS+KLFELD EN GY+VLLSN+Y++++ Y +AA VRQ  K RKL K PGCTLIE+G 
Sbjct: 603 AKLASQKLFELDSENAGYYVLLSNLYTSKKHYSEAAVVRQEAKTRKLVKTPGCTLIEIGD 662

Query: 660 TPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEK 719
            PHVF +GD LHPQS AIY+ LE+L  KM EAG+Q  T  AL+DVEEEEKE M+KVHSEK
Sbjct: 663 RPHVFMAGDHLHPQSEAIYSYLERLTAKMIEAGYQPVTEAALYDVEEEEKEHMVKVHSEK 722

Query: 720 LAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCS 779
           LAIAFGL++TEPGTEIRIIKNLRVCLDCH ATKFISKVT R+IVVRDA+RFHHF+ GVCS
Sbjct: 723 LAIAFGLLSTEPGTEIRIIKNLRVCLDCHNATKFISKVTQRLIVVRDASRFHHFRDGVCS 782

Query: 780 CGDYW 784
           CGDYW
Sbjct: 783 CGDYW 787


>gi|357118480|ref|XP_003560982.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g30700-like [Brachypodium distachyon]
          Length = 796

 Score =  827 bits (2137), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 411/791 (51%), Positives = 545/791 (68%), Gaps = 33/791 (4%)

Query: 9   RNLFLSLLKGAKTQSQLTQTHAQIIIHG-FQNDLSTVTKLAHRLSDFKAT-CYARALFFS 66
           R  +L L+  + T   L Q  A  +  G +  D +  + L  R +  ++   +   L+ +
Sbjct: 24  RRSYLRLISLSSTLGHLDQLLAVSLASGHYTLDHAPASSLLLRYASLRSPPAHLLRLYRA 83

Query: 67  IPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTAL-TPDNFTYSFVLSAASACCDRS 125
            P+PD FL N ++R                 LR +    +PD+F+++F  ++ ++ C R 
Sbjct: 84  FPRPDRFLRNSLLRSLPT-------------LRADLLFPSPDSFSFAFAATSLASSCSRG 130

Query: 126 IGV-----------LLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDT 174
            G+            LH  A+ SG+ +D FV +AL  LYF  S    ARKVFD +P  DT
Sbjct: 131 -GISPPSAASAALRPLHALAVASGFAADNFVASALAKLYFTLSRGNDARKVFDAVPSPDT 189

Query: 175 VLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQC 234
           VLWN++++GL  +    +++  F  M   G    DST++A+VLPA AEV    +G  +  
Sbjct: 190 VLWNTLLAGLSGS----EALEAFVRMAGAGSVRPDSTTLASVLPAAAEVANTTMGRCVHA 245

Query: 235 LGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTES 294
            G K G   H +V+TGL+S Y+KCG++E A  LF  +  PDL++ NA+ISGY+ NG   S
Sbjct: 246 FGEKCGLAQHEHVVTGLISLYAKCGDMECARHLFDRMEGPDLVTYNALISGYSINGMVGS 305

Query: 295 SLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALST 354
           S+ LF++L+    R +SST+V LIPV  PFGH  L  C+H+  +K+G+ +N+ V TAL+T
Sbjct: 306 SVELFKELVGMGLRPSSSTLVALIPVHSPFGHEPLAGCLHAHVVKAGLDANAPVSTALTT 365

Query: 355 VYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVT 414
           +Y R N+M++AR+ FD   EK++ SWNAMI+GY QNGLTE A++LFQ+MQA  V PNP+T
Sbjct: 366 LYCRFNDMDSARRAFDAMPEKTMESWNAMISGYAQNGLTEMAVALFQQMQALNVRPNPLT 425

Query: 415 VSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMS 474
           +SS LSACAQLGA+SLGKWVH+++ +   E N+YV TALIDMY KCG+I EAR +FD M 
Sbjct: 426 ISSALSACAQLGALSLGKWVHKIIANEKLELNVYVMTALIDMYVKCGSIAEARCIFDSMD 485

Query: 475 HKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDE 534
           +K+ V+WN MISGYGLHG G EAL+L+ +M+ + + P+  TFLSVLYACSH GLV+EG  
Sbjct: 486 NKNVVSWNVMISGYGLHGQGAEALKLYKDMMDAHLHPTSSTFLSVLYACSHGGLVKEGTT 545

Query: 535 IFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEP-GPAVWGALLGACMI 593
           +F+SM  D+G  P  EH  CMVD+LGRAGQL++A E I        GP +WGALLGACM+
Sbjct: 546 VFRSMTSDYGITPGIEHCTCMVDLLGRAGQLKEAFELISEFPKSAVGPGIWGALLGACMV 605

Query: 594 HKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCT 653
           HKD +LA++AS+KLFEL+PEN GY+VLLSN+Y++++ Y +AA VRQ  K RKL K PGCT
Sbjct: 606 HKDGDLAKLASQKLFELEPENTGYYVLLSNLYTSKKQYSEAAVVRQEAKSRKLVKTPGCT 665

Query: 654 LIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMM 713
           LIE+G  PHVF +GD+ HPQS AIY  LEKL  KM EAG++ +T  AL+DVEEEEKE M+
Sbjct: 666 LIEIGDRPHVFMAGDRAHPQSDAIYLYLEKLTAKMIEAGYRPDTEAALYDVEEEEKEHMV 725

Query: 714 KVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHF 773
           KVHSEKLAIAFGL+ TEPGTEIRIIKNLRVCLDCH ATK ISKVT R+IVVRDA+RFHHF
Sbjct: 726 KVHSEKLAIAFGLLNTEPGTEIRIIKNLRVCLDCHNATKIISKVTQRLIVVRDASRFHHF 785

Query: 774 KGGVCSCGDYW 784
           + GVCSCGDYW
Sbjct: 786 RDGVCSCGDYW 796


>gi|115466812|ref|NP_001057005.1| Os06g0185800 [Oryza sativa Japonica Group]
 gi|55773756|dbj|BAD72439.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|113595045|dbj|BAF18919.1| Os06g0185800 [Oryza sativa Japonica Group]
 gi|125596288|gb|EAZ36068.1| hypothetical protein OsJ_20378 [Oryza sativa Japonica Group]
          Length = 787

 Score =  827 bits (2136), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 421/787 (53%), Positives = 547/787 (69%), Gaps = 28/787 (3%)

Query: 9   RNLFLSLLKGAKTQSQLTQTHAQIIIHG-FQNDLSTVTKLAHRLSDFKA-TCYARALFFS 66
           R  +L L+  + T   L Q  A  +  G +  D +  T L  R +  +A T +   LF  
Sbjct: 18  RRPYLRLVALSSTLRHLDQILAVSLASGHYPLDPAPATSLLLRYASLRAPTGHLLRLFRG 77

Query: 67  IPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALT-PDNFTYSFVLSAASACCDRS 125
            P+PD FL N ++R   +             LR       PD+F+++F  ++ +A C R 
Sbjct: 78  FPRPDRFLRNALLRSLPS-------------LRPRLLFPCPDSFSFAFAATSLAALCSRG 124

Query: 126 IGVL-------LHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWN 178
            G         LH  A+ +GY +D FV +AL  LYF  S V  ARKVFD +P  DTVLWN
Sbjct: 125 GGAASSSAARALHALAVAAGYAADTFVASALAKLYFVLSRVDHARKVFDTVPSPDTVLWN 184

Query: 179 SMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLK 238
           ++++GL  +    +++  F  MV +G    D+T++A+VLPA AEV ++ +G  +     K
Sbjct: 185 TLLAGLSGS----EAVESFARMVCDGSVRPDATTLASVLPAAAEVADVTMGRCVHSFAEK 240

Query: 239 LGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRL 298
            G  +H +VLTGL+S YSKCG+VE A  LF  + +PDL++ NA+ISGY+ NG   SS+ L
Sbjct: 241 CGLAEHEHVLTGLISLYSKCGDVESARCLFDMMEKPDLVAYNALISGYSVNGMVGSSVNL 300

Query: 299 FRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSR 358
           F +L+      NSST+V LIPV  PFGH  L  C+H F LKSG  +NS V TA++T++ R
Sbjct: 301 FTELMTLGLWPNSSTLVALIPVHSPFGHDLLAQCLHGFVLKSGFTANSPVSTAITTLHCR 360

Query: 359 LNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSI 418
           LN+ME+ARK FD   EK++ SWNAMI+GY QNGLTE A++LF++M    V PNP+T+SS 
Sbjct: 361 LNDMESARKAFDTMPEKTMESWNAMISGYAQNGLTEMAVALFEQMVKLNVRPNPITISST 420

Query: 419 LSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSE 478
           LSACAQLGA+SLGKW+H ++   + E N+YV TALIDMYAKCG+I EAR +F+ M +K+ 
Sbjct: 421 LSACAQLGALSLGKWLHRIITEEDLEPNVYVMTALIDMYAKCGSISEARRIFNTMDNKNV 480

Query: 479 VTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQS 538
           V+WN MI+GYGLHG G EAL+L+ +ML + + P+  TFLSVLYACSH GLV EG ++F+S
Sbjct: 481 VSWNAMIAGYGLHGQGAEALKLYKDMLDAHLLPTSATFLSVLYACSHGGLVEEGWKVFRS 540

Query: 539 MIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEP-GPAVWGALLGACMIHKDT 597
           M  D+   P  EH  CMVD+LGRAGQL++A E I        GP VWGALLGACM+HKD+
Sbjct: 541 MTDDYAINPGIEHCTCMVDLLGRAGQLKEAFELISEFPKSAVGPGVWGALLGACMVHKDS 600

Query: 598 NLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEV 657
           +LA++AS+KLFELDPEN GY+VLLSN++++++ Y +AA VRQ  K RKL K PG TLIE+
Sbjct: 601 DLAKLASQKLFELDPENSGYYVLLSNLHTSKKQYSEAAVVRQEAKSRKLVKTPGYTLIEI 660

Query: 658 GGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHS 717
           G  PHVF +GD+ HPQS AIY+ LEKL  KM EAG++ ET  AL+DVEEEEKE M+KVHS
Sbjct: 661 GNKPHVFMAGDRAHPQSEAIYSYLEKLTAKMIEAGYRPETEAALYDVEEEEKEHMVKVHS 720

Query: 718 EKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGV 777
           EKLAIAFGL++TEPGTEIRIIKNLRVCLDCH ATKFISKVT R+IVVRDA+RFHHF+ GV
Sbjct: 721 EKLAIAFGLLSTEPGTEIRIIKNLRVCLDCHNATKFISKVTQRLIVVRDASRFHHFRDGV 780

Query: 778 CSCGDYW 784
           CSCGDYW
Sbjct: 781 CSCGDYW 787


>gi|255585042|ref|XP_002533229.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526949|gb|EEF29150.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 575

 Score =  736 bits (1900), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 367/535 (68%), Positives = 440/535 (82%)

Query: 6   PQSRNLFLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFF 65
           P +R+ FL+LL  + T S LTQ HA +++HG QND++  TKL H+L +F AT +A ALFF
Sbjct: 13  PHTRHFFLNLLNKSTTLSHLTQLHAHLLLHGLQNDIAVATKLTHKLFNFNATSHASALFF 72

Query: 66  SIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRS 125
           +IPKPDLFLFNV+I+GFSNN  P S+I  +THLRK+T L PDNFTY+FV+SAA    D  
Sbjct: 73  TIPKPDLFLFNVLIKGFSNNNSPLSAISLFTHLRKSTDLYPDNFTYAFVVSAARNFGDAK 132

Query: 126 IGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLM 185
           IG  LHG  IV G  SDLFVG+ALVD+YFK S    A KVFDK+PE+DT+L+N+MISGL+
Sbjct: 133 IGFSLHGRVIVDGLSSDLFVGSALVDMYFKLSREDIALKVFDKLPERDTILYNTMISGLV 192

Query: 186 KNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHV 245
           + CC++DSI +F  M+   G   DST+V AVLPA+AE+QELRLG EIQCL +KLGF  H+
Sbjct: 193 RVCCYEDSIRLFKYMISGNGPQFDSTTVLAVLPALAELQELRLGTEIQCLAIKLGFLSHI 252

Query: 246 YVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLAS 305
            V+TGL+S YSKCG+V+ A +LF DI R DLIS NAMISG T NG+TESS+RLF + L S
Sbjct: 253 SVVTGLISLYSKCGDVDTASILFTDIGRKDLISYNAMISGLTFNGETESSVRLFEEWLDS 312

Query: 306 AERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAA 365
            E+VNSS+IVGLIPV+ PFG+L LTNCIH F +KSGIVS+SSV TAL+TVYSRLNEMEAA
Sbjct: 313 GEKVNSSSIVGLIPVYCPFGYLPLTNCIHGFGVKSGIVSHSSVATALTTVYSRLNEMEAA 372

Query: 366 RKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQL 425
           R+LFDESSEK+LASWNAMIAGYTQNG TE+AISLFQEMQ   ++PNPVTV+SILSACAQL
Sbjct: 373 RQLFDESSEKTLASWNAMIAGYTQNGATEKAISLFQEMQMYNISPNPVTVTSILSACAQL 432

Query: 426 GAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMI 485
           GA++LGKW+H LVK ++FE N+YVSTALIDMYAKCG+I+EAR LFD M  K+EVTWN +I
Sbjct: 433 GALTLGKWIHGLVKFKSFEYNVYVSTALIDMYAKCGSILEARRLFDSMPEKNEVTWNAII 492

Query: 486 SGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMI 540
           SGYGLHG G EAL+LF EML+ GI+P+ VTFLSVLYACSHAGLVREGDEIF SMI
Sbjct: 493 SGYGLHGLGQEALKLFYEMLNCGIQPTRVTFLSVLYACSHAGLVREGDEIFHSMI 547


>gi|148909481|gb|ABR17838.1| unknown [Picea sitchensis]
          Length = 795

 Score =  623 bits (1606), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 308/706 (43%), Positives = 444/706 (62%), Gaps = 2/706 (0%)

Query: 79  IRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSG 138
           I G+  N     ++  Y  +++ T + PD   +  V+ A  +  D   G  +H   I  G
Sbjct: 92  IIGYVKNGFWNKALRLYYQMQR-TGINPDKLVFLSVIKACGSQSDLQAGRKVHEDIIARG 150

Query: 139 YGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFG 198
           + SD+ VG AL  +Y K   +++AR+VFD+MP++D V WN++I+G  +N    +++ +F 
Sbjct: 151 FESDVIVGTALASMYTKCGSLENARQVFDRMPKRDVVSWNAIIAGYSQNGQPYEALALFS 210

Query: 199 DMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKC 258
           +M  NG    +S+++ +V+P  A +  L  G +I C  ++ G    V V+ GLV+ Y+KC
Sbjct: 211 EMQVNG-IKPNSSTLVSVMPVCAHLLALEQGKQIHCYAIRSGIESDVLVVNGLVNMYAKC 269

Query: 259 GEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLI 318
           G V  A  LF  +   D+ S NA+I GY+ N +   +L  F ++     + NS T+V ++
Sbjct: 270 GNVNTAHKLFERMPIRDVASWNAIIGGYSLNSQHHEALAFFNRMQVRGIKPNSITMVSVL 329

Query: 319 PVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLA 378
           P       L     IH + ++SG  SN  V  AL  +Y++   + +A KLF+   +K++ 
Sbjct: 330 PACAHLFALEQGQQIHGYAIRSGFESNDVVGNALVNMYAKCGNVNSAYKLFERMPKKNVV 389

Query: 379 SWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELV 438
           +WNA+I+GY+Q+G   EA++LF EMQA  + P+   + S+L ACA   A+  GK +H   
Sbjct: 390 AWNAIISGYSQHGHPHEALALFIEMQAQGIKPDSFAIVSVLPACAHFLALEQGKQIHGYT 449

Query: 439 KSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEAL 498
               FESN+ V T L+D+YAKCGN+  A++LF+ M  +  V+W TMI  YG+HGHG +AL
Sbjct: 450 IRSGFESNVVVGTGLVDIYAKCGNVNTAQKLFERMPEQDVVSWTTMILAYGIHGHGEDAL 509

Query: 499 QLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDI 558
            LFS+M  +G +   + F ++L ACSHAGLV +G + FQ M  D+G  P  EHYAC+VD+
Sbjct: 510 ALFSKMQETGTKLDHIAFTAILTACSHAGLVDQGLQYFQCMKSDYGLAPKLEHYACLVDL 569

Query: 559 LGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYH 618
           LGRAG L++A   IK +++EP   VWGALLGAC IH +  L   A++ LFELDP+N GY+
Sbjct: 570 LGRAGHLDEANGIIKNMSLEPDANVWGALLGACRIHCNIELGEQAAKHLFELDPDNAGYY 629

Query: 619 VLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIY 678
           VLLSNIY+  + +   A +R+++K++ + K PGC+++ V      F  GD+ HPQS  IY
Sbjct: 630 VLLSNIYAEAQRWEDVAKLRKMMKEKGVKKQPGCSVVAVHRDVQTFLVGDRTHPQSEQIY 689

Query: 679 AMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRII 738
           AMLE L  +MR+AG+   T  AL DVEEE KE ++  HSEKLAI+FG+I T PG  IRI+
Sbjct: 690 AMLEILYEQMRKAGYVPNTNLALQDVEEEAKENILSSHSEKLAISFGIINTSPGIPIRIM 749

Query: 739 KNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           KNLRVC DCH ATKFISK+ GR I+VRDANRFHH K G CSCGDYW
Sbjct: 750 KNLRVCSDCHNATKFISKIVGREIIVRDANRFHHVKNGFCSCGDYW 795



 Score =  255 bits (652), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 147/424 (34%), Positives = 226/424 (53%), Gaps = 3/424 (0%)

Query: 171 EKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGM 230
             + V+W   I G +KN  +  ++ ++  M R G    D     +V+ A     +L+ G 
Sbjct: 82  RNNAVVWKETIIGYVKNGFWNKALRLYYQMQRTGIN-PDKLVFLSVIKACGSQSDLQAGR 140

Query: 231 EIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNG 290
           ++    +  GF   V V T L S Y+KCG +E A  +F  + + D++S NA+I+GY+ NG
Sbjct: 141 KVHEDIIARGFESDVIVGTALASMYTKCGSLENARQVFDRMPKRDVVSWNAIIAGYSQNG 200

Query: 291 KTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLT 350
           +   +L LF ++  +  + NSST+V ++PV      L     IH + ++SGI S+  V+ 
Sbjct: 201 QPYEALALFSEMQVNGIKPNSSTLVSVMPVCAHLLALEQGKQIHCYAIRSGIESDVLVVN 260

Query: 351 ALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAP 410
            L  +Y++   +  A KLF+    + +ASWNA+I GY+ N    EA++ F  MQ   + P
Sbjct: 261 GLVNMYAKCGNVNTAHKLFERMPIRDVASWNAIIGGYSLNSQHHEALAFFNRMQVRGIKP 320

Query: 411 NPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELF 470
           N +T+ S+L ACA L A+  G+ +H       FESN  V  AL++MYAKCGN+  A +LF
Sbjct: 321 NSITMVSVLPACAHLFALEQGQQIHGYAIRSGFESNDVVGNALVNMYAKCGNVNSAYKLF 380

Query: 471 DLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVR 530
           + M  K+ V WN +ISGY  HGH  EAL LF EM   GI+P     +SVL AC+H   + 
Sbjct: 381 ERMPKKNVVAWNAIISGYSQHGHPHEALALFIEMQAQGIKPDSFAIVSVLPACAHFLALE 440

Query: 531 EGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGA 590
           +G +I    I   GF+        +VDI  + G +  A +  + +  E     W  ++ A
Sbjct: 441 QGKQIHGYTIRS-GFESNVVVGTGLVDIYAKCGNVNTAQKLFERMP-EQDVVSWTTMILA 498

Query: 591 CMIH 594
             IH
Sbjct: 499 YGIH 502



 Score =  233 bits (593), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 146/487 (29%), Positives = 252/487 (51%), Gaps = 9/487 (1%)

Query: 11  LFLSLLKGAKTQSQLT---QTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSI 67
           +FLS++K   +QS L    + H  II  GF++D+   T LA   +   +   AR +F  +
Sbjct: 122 VFLSVIKACGSQSDLQAGRKVHEDIIARGFESDVIVGTALASMYTKCGSLENARQVFDRM 181

Query: 68  PKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIG 127
           PK D+  +N II G+S N  P  ++  ++ ++ N  + P++ T   V+   +       G
Sbjct: 182 PKRDVVSWNAIIAGYSQNGQPYEALALFSEMQVN-GIKPNSSTLVSVMPVCAHLLALEQG 240

Query: 128 VLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKN 187
             +H +AI SG  SD+ V   LV++Y K   V +A K+F++MP +D   WN++I G   N
Sbjct: 241 KQIHCYAIRSGIESDVLVVNGLVNMYAKCGNVNTAHKLFERMPIRDVASWNAIIGGYSLN 300

Query: 188 CCFQDSIWVFGDM-VRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVY 246
               +++  F  M VR  G   +S ++ +VLPA A +  L  G +I    ++ GF  +  
Sbjct: 301 SQHHEALAFFNRMQVR--GIKPNSITMVSVLPACAHLFALEQGQQIHGYAIRSGFESNDV 358

Query: 247 VLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASA 306
           V   LV+ Y+KCG V  A  LF  + + ++++ NA+ISGY+ +G    +L LF ++ A  
Sbjct: 359 VGNALVNMYAKCGNVNSAYKLFERMPKKNVVAWNAIISGYSQHGHPHEALALFIEMQAQG 418

Query: 307 ERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAAR 366
            + +S  IV ++P    F  L     IH + ++SG  SN  V T L  +Y++   +  A+
Sbjct: 419 IKPDSFAIVSVLPACAHFLALEQGKQIHGYTIRSGFESNVVVGTGLVDIYAKCGNVNTAQ 478

Query: 367 KLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLG 426
           KLF+   E+ + SW  MI  Y  +G  E+A++LF +MQ +    + +  ++IL+AC+  G
Sbjct: 479 KLFERMPEQDVVSWTTMILAYGIHGHGEDALALFSKMQETGTKLDHIAFTAILTACSHAG 538

Query: 427 AISLGKWVHELVKSR-NFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVT-WNTM 484
            +  G    + +KS       +     L+D+  + G++ EA  +   MS + +   W  +
Sbjct: 539 LVDQGLQYFQCMKSDYGLAPKLEHYACLVDLLGRAGHLDEANGIIKNMSLEPDANVWGAL 598

Query: 485 ISGYGLH 491
           +    +H
Sbjct: 599 LGACRIH 605



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 101/323 (31%), Positives = 168/323 (52%), Gaps = 2/323 (0%)

Query: 272 VRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTN 331
           +R + +     I GY  NG    +LRL+ Q+  +    +    + +I        L    
Sbjct: 81  IRNNAVVWKETIIGYVKNGFWNKALRLYYQMQRTGINPDKLVFLSVIKACGSQSDLQAGR 140

Query: 332 CIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNG 391
            +H   +  G  S+  V TAL+++Y++   +E AR++FD   ++ + SWNA+IAGY+QNG
Sbjct: 141 KVHEDIIARGFESDVIVGTALASMYTKCGSLENARQVFDRMPKRDVVSWNAIIAGYSQNG 200

Query: 392 LTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVST 451
              EA++LF EMQ + + PN  T+ S++  CA L A+  GK +H        ES++ V  
Sbjct: 201 QPYEALALFSEMQVNGIKPNSSTLVSVMPVCAHLLALEQGKQIHCYAIRSGIESDVLVVN 260

Query: 452 ALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRP 511
            L++MYAKCGN+  A +LF+ M  +   +WN +I GY L+    EAL  F+ M   GI+P
Sbjct: 261 GLVNMYAKCGNVNTAHKLFERMPIRDVASWNAIIGGYSLNSQHHEALAFFNRMQVRGIKP 320

Query: 512 SGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEF 571
           + +T +SVL AC+H   + +G +I    I   GF+        +V++  + G +  A + 
Sbjct: 321 NSITMVSVLPACAHLFALEQGQQIHGYAIRS-GFESNDVVGNALVNMYAKCGNVNSAYKL 379

Query: 572 IKGLAVEPGPAVWGALLGACMIH 594
            + +  +     W A++     H
Sbjct: 380 FERMP-KKNVVAWNAIISGYSQH 401


>gi|356515320|ref|XP_003526349.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Glycine max]
          Length = 816

 Score =  617 bits (1592), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 311/770 (40%), Positives = 473/770 (61%), Gaps = 3/770 (0%)

Query: 15  LLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFL 74
           LL+   +  +L Q    II +GF N+    TKL      F +   A  +F  +      L
Sbjct: 50  LLELCTSLKELHQILPLIIKNGFYNEHLFQTKLISLFCKFNSITEAARVFEPVEHKLDVL 109

Query: 75  FNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHA 134
           ++ +++G++ N   + ++ FY  +R +  + P  + ++++L  +    D   G  +HG  
Sbjct: 110 YHTMLKGYAKNSTLRDAVRFYERMRCDEVM-PVVYDFTYLLQLSGENLDLRRGREIHGMV 168

Query: 135 IVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSI 194
           I +G+ S+LF   A+V+LY K   ++ A K+F++MP++D V WN++++G  +N   + ++
Sbjct: 169 ITNGFQSNLFAMTAVVNLYAKCRQIEDAYKMFERMPQRDLVSWNTVVAGYAQNGFARRAV 228

Query: 195 WVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSF 254
            V   M +  G   DS ++ +VLPAVA+++ LR+G  I     + GF   V V T ++  
Sbjct: 229 QVVLQM-QEAGQKPDSITLVSVLPAVADLKALRIGRSIHGYAFRAGFEYMVNVATAMLDT 287

Query: 255 YSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTI 314
           Y KCG V  A L+F+ +   +++S N MI GY  NG++E +   F ++L       + ++
Sbjct: 288 YFKCGSVRSARLVFKGMSSRNVVSWNTMIDGYAQNGESEEAFATFLKMLDEGVEPTNVSM 347

Query: 315 VGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSE 374
           +G +      G L     +H    +  I  + SV+ +L ++YS+   ++ A  +F     
Sbjct: 348 MGALHACANLGDLERGRYVHRLLDEKKIGFDVSVMNSLISMYSKCKRVDIAASVFGNLKH 407

Query: 375 KSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWV 434
           K++ +WNAMI GY QNG   EA++LF EMQ+  + P+  T+ S+++A A L      KW+
Sbjct: 408 KTVVTWNAMILGYAQNGCVNEALNLFCEMQSHDIKPDSFTLVSVITALADLSVTRQAKWI 467

Query: 435 HELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHG 494
           H L      + N++V TALID +AKCG I  AR+LFDLM  +  +TWN MI GYG +GHG
Sbjct: 468 HGLAIRTLMDKNVFVCTALIDTHAKCGAIQTARKLFDLMQERHVITWNAMIDGYGTNGHG 527

Query: 495 LEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYAC 554
            EAL LF+EM +  ++P+ +TFLSV+ ACSH+GLV EG   F+SM  ++G +P  +HY  
Sbjct: 528 REALDLFNEMQNGSVKPNEITFLSVIAACSHSGLVEEGMYYFESMKENYGLEPTMDHYGA 587

Query: 555 MVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPEN 614
           MVD+LGRAG+L+ A +FI+ + V+PG  V GA+LGAC IHK+  L    +++LF+LDP++
Sbjct: 588 MVDLLGRAGRLDDAWKFIQDMPVKPGITVLGAMLGACRIHKNVELGEKTADELFDLDPDD 647

Query: 615 VGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQS 674
            GYHVLL+N+Y++   + + A VR  ++K+ + K PGC+L+E+    H F SG   HPQS
Sbjct: 648 GGYHVLLANMYASASMWDKVARVRTAMEKKGIQKTPGCSLVELRNEVHTFYSGSTNHPQS 707

Query: 675 TAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTE 734
             IYA LE L  +M+ AG+  +T  ++HDVEE+ KE ++  HSE+LAIAFGL+ T  GT 
Sbjct: 708 KRIYAYLETLGDEMKAAGYVPDT-NSIHDVEEDVKEQLLSSHSERLAIAFGLLNTRHGTA 766

Query: 735 IRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           I I KNLRVC DCH ATK+IS VTGR I+VRD  RFHHFK G+CSCGDYW
Sbjct: 767 IHIRKNLRVCGDCHEATKYISLVTGREIIVRDLRRFHHFKNGICSCGDYW 816


>gi|225449798|ref|XP_002272111.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Vitis vinifera]
          Length = 849

 Score =  603 bits (1556), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 311/790 (39%), Positives = 471/790 (59%), Gaps = 12/790 (1%)

Query: 4   KTPQSRNLFLS---------LLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDF 54
           +TP SR    S         LL+   +  +L Q    II +G  ++    TKL      F
Sbjct: 63  RTPSSRTYIPSHVYKHPSAILLELCTSMKELHQFIPLIIKNGLYSEHLFQTKLVSLFCKF 122

Query: 55  KATCYARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFV 114
            +   A  +F  I      L++ +++G++ N     ++ F+  +R +  + P  + ++++
Sbjct: 123 GSLHEAARVFQPIEDKIDELYHTMLKGYARNSSLDDAVSFFCRMRYD-GVRPVVYNFTYL 181

Query: 115 LSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDT 174
           L       D   G  +H   IV+G+ S++F    +V++Y K   V+ A K+FD+MPE+D 
Sbjct: 182 LKVCGDNADLRKGKEIHCQLIVNGFASNVFAMTGVVNMYAKCRLVEEAYKMFDRMPERDL 241

Query: 175 VLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQC 234
           V WN++ISG  +N   + ++ +   M +  G   DS ++ ++LPAVA+V  LR+G  I  
Sbjct: 242 VCWNTIISGYAQNGFGKTALELVLRM-QEEGKRPDSITIVSILPAVADVGSLRIGRSIHG 300

Query: 235 LGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTES 294
             ++ GF   V V T LV  YSKCG V  A L+F  +    ++S N+MI GY  NG   +
Sbjct: 301 YSMRAGFESFVNVSTALVDMYSKCGSVGTARLIFDRMTGKTVVSWNSMIDGYVQNGDPGA 360

Query: 295 SLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALST 354
           ++ +F++++     + + T++G +      G +     +H    +  + S+ SV+ +L +
Sbjct: 361 AMEIFQKMMDEQVEMTNVTVMGALHACADLGDVEQGRFVHKLLDQLELGSDVSVMNSLIS 420

Query: 355 VYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVT 414
           +YS+   ++ A ++F+    K+L SWNAMI GY QNG   EAI  F +MQ   + P+  T
Sbjct: 421 MYSKCKRVDIAAEIFENLQHKTLVSWNAMILGYAQNGRINEAIDYFCKMQLQNIKPDSFT 480

Query: 415 VSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMS 474
           + S++ A A+L  +   KW+H LV     + N++V+TAL+DMYAKCG +  AR+LFD+M 
Sbjct: 481 MVSVIPALAELSVLPQAKWIHGLVIRTCLDKNVFVATALVDMYAKCGAVHTARKLFDMMD 540

Query: 475 HKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDE 534
            +   TWN MI GYG HG G  AL+LF +M    I+P+ VTFL VL ACSH+GLV EG +
Sbjct: 541 ERHVTTWNAMIDGYGTHGLGKAALELFEKMKKEVIKPNEVTFLCVLSACSHSGLVEEGFQ 600

Query: 535 IFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIH 594
            F SM  D+G +P  +HY  MVD+LGRA +L +A +FI+ + +EP  +V+GA+LGAC IH
Sbjct: 601 YFGSMKKDYGLEPAMDHYGAMVDLLGRANRLNEAWDFIQKMPIEPAISVFGAMLGACRIH 660

Query: 595 KDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTL 654
           K+  L   A+ ++F+LDP++ GYHVLL+NIY+    + + A VR  ++K+ + K PG ++
Sbjct: 661 KNVELGEKAANRIFDLDPDDGGYHVLLANIYATASMWDKVARVRTTMEKKGIQKTPGWSV 720

Query: 655 IEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMK 714
           +E+    H F SG   HPQ+  IYA LE L  +++ AG+  +T  ++HDVE+  KE ++ 
Sbjct: 721 VELQNEVHTFYSGTTSHPQAKKIYAFLETLGNRIKAAGYMPDT-NSVHDVEDVVKEQLLN 779

Query: 715 VHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFK 774
            HSEKLAIAF L+ T PGT I + KNLRVC DCH ATK+IS VT R I+VRD  RFHHFK
Sbjct: 780 SHSEKLAIAFSLLNTSPGTTIHLRKNLRVCGDCHNATKYISLVTKREIIVRDMRRFHHFK 839

Query: 775 GGVCSCGDYW 784
            G CSCGDYW
Sbjct: 840 DGTCSCGDYW 849


>gi|449523792|ref|XP_004168907.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Cucumis sativus]
          Length = 821

 Score =  599 bits (1545), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 302/770 (39%), Positives = 470/770 (61%), Gaps = 3/770 (0%)

Query: 15  LLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFL 74
           LL+   +  +L Q    +I +G  N+    TKL    S + +   A  +F  I      L
Sbjct: 55  LLELCTSMKELHQIIPLVIKNGLYNEHLFQTKLVSLFSKYGSINEAARVFEPIDDKLDAL 114

Query: 75  FNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHA 134
           ++ +++G++ N   ++++ F   +R +  + P  + ++++L       D   G  +HG  
Sbjct: 115 YHTMLKGYAKNSSLETALAFLCRMRYDD-VKPVVYNFTYLLKVCGDNADLKRGKEIHGQL 173

Query: 135 IVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSI 194
           I + + +++F    +V++Y K   +  A K+FD+MPE+D V WN++I+G  +N   + ++
Sbjct: 174 ITNSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKAL 233

Query: 195 WVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSF 254
            +   M ++ G   DS ++  VLPA A+V  L +G  I    ++ GF   V + T L   
Sbjct: 234 ELVLRM-QDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALADM 292

Query: 255 YSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTI 314
           YSKCG VE A L+F  + +  ++S N+M+ GY  NG+ E ++ +F ++L         TI
Sbjct: 293 YSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTI 352

Query: 315 VGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSE 374
           +  +      G L     +H F  +  + S+ SV+ +L ++YS+   ++ A  +F+  + 
Sbjct: 353 MEALHACADLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNG 412

Query: 375 KSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWV 434
           ++  SWNAMI GY QNG   EA++ F EM++  + P+  T+ S++ A A+L      KW+
Sbjct: 413 RTHVSWNAMILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKWI 472

Query: 435 HELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHG 494
           H L+     + NI+V+TAL+DMY+KCG I  AR+LFD++S +  +TWN MI GYG HG G
Sbjct: 473 HGLIIRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTHGLG 532

Query: 495 LEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYAC 554
             AL LF +M    + P+ +T+LSV+ ACSH+GLV EG   F+SM  D+G +P  +HY  
Sbjct: 533 RAALDLFDKMKKGAVEPNDITYLSVISACSHSGLVDEGLRHFKSMKQDYGLEPSMDHYGA 592

Query: 555 MVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPEN 614
           MVD+LGRAG++++A +FI+ + + PG  V+GA+LGAC IHK+  +   A++KLFEL+P+ 
Sbjct: 593 MVDLLGRAGRIKEAWDFIENMPISPGITVYGAMLGACKIHKNIEVGEKAAKKLFELNPDE 652

Query: 615 VGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQS 674
            GYHVLL+NIY++   + + A VR+ ++K+ L K PGC+++E+    H F SG   HPQS
Sbjct: 653 GGYHVLLANIYASTSKWSKVAEVRKTMEKKGLKKTPGCSVVELRNEVHSFYSGSTTHPQS 712

Query: 675 TAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTE 734
             IYA LE+L  +++ AG+  +T   L DVE++ +E ++  HSEKLAIAFGL+ T PGT 
Sbjct: 713 KRIYAFLEELVYEIKAAGYVPDTNLIL-DVEDDVQEQLLNSHSEKLAIAFGLLNTSPGTT 771

Query: 735 IRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           I + KNLRVC DCH ATK+IS VTGR I+VRD  RFHHFK G+CSCGDYW
Sbjct: 772 IHVRKNLRVCGDCHNATKYISLVTGREIIVRDMQRFHHFKNGICSCGDYW 821


>gi|224073070|ref|XP_002303960.1| predicted protein [Populus trichocarpa]
 gi|222841392|gb|EEE78939.1| predicted protein [Populus trichocarpa]
          Length = 704

 Score =  599 bits (1545), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 297/707 (42%), Positives = 446/707 (63%), Gaps = 3/707 (0%)

Query: 78  IIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVS 137
           +++G++ +    S++ F++ + K+ ++ P  + ++++L       D   G  +HG  I S
Sbjct: 1   MLKGYAKSSSLDSALSFFSRM-KHDSVRPVVYNFTYLLKLCGDNSDLKRGKEIHGSVITS 59

Query: 138 GYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVF 197
           G+  +LF    +V++Y K   +  A  +FD+MPE+D V WN+MISG  +N   + ++ + 
Sbjct: 60  GFSWNLFAMTGVVNMYAKCRQINDAYNMFDRMPERDLVCWNTMISGYAQNGFAKVALMLV 119

Query: 198 GDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSK 257
             M   G    DS ++ ++LPAVA+ + LR+GM +    L+ GF   V V T LV  YSK
Sbjct: 120 LRMSEEGHR-PDSITIVSILPAVADTRLLRIGMAVHGYVLRAGFESLVNVSTALVDMYSK 178

Query: 258 CGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGL 317
           CG V  A ++F  +    ++S N+MI GY  +G  E ++ +F+++L    +  + T++G 
Sbjct: 179 CGSVSIARVIFDGMDHRTVVSWNSMIDGYVQSGDAEGAMLIFQKMLDEGVQPTNVTVMGA 238

Query: 318 IPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSL 377
           +      G L     +H    +  + S+ SV+ +L ++YS+   ++ A  +F     K+L
Sbjct: 239 LHACADLGDLERGKFVHKLVDQLKLDSDVSVMNSLISMYSKCKRVDIAADIFKNLRNKTL 298

Query: 378 ASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHEL 437
            SWNAMI GY QNG   EA++ F EMQ+  + P+  T+ S++ A A+L      KW+H L
Sbjct: 299 VSWNAMILGYAQNGCVNEALNAFCEMQSRNIKPDSFTMVSVIPALAELSIPRQAKWIHGL 358

Query: 438 VKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEA 497
           V  R  + N++V TAL+DMYAKCG I  AR+LFD+M+ +  +TWN MI GYG HG G  +
Sbjct: 359 VIRRFLDKNVFVMTALVDMYAKCGAIHTARKLFDMMNARHVITWNAMIDGYGTHGLGKTS 418

Query: 498 LQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVD 557
           ++LF EM    I+P+ +TFL  L ACSH+GLV EG   F+SM  D+G +P  +HY  MVD
Sbjct: 419 VELFKEMKKGTIKPNDITFLCALSACSHSGLVEEGLCFFESMKKDYGIEPTMDHYGAMVD 478

Query: 558 ILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGY 617
           +LGRAG+L +A +FI+ + ++PG  V+GA+LGAC IHK+ +L   A+ ++F+L+P++ GY
Sbjct: 479 LLGRAGRLNQAWDFIQKMPIKPGITVYGAMLGACKIHKNVDLGEKAAFEIFKLNPDDGGY 538

Query: 618 HVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAI 677
           HVLL+NIY+    + + A VR +++K  L K PGC+L+E+G   H F SG   HPQS  I
Sbjct: 539 HVLLANIYATASMWGKVAKVRTIMEKSGLQKTPGCSLVEIGNEVHSFYSGTTSHPQSKKI 598

Query: 678 YAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRI 737
           Y+ LE L  ++R AG+  +T  ++HDVE++ K  ++  HSEKLAIAFGL+ T  GT I I
Sbjct: 599 YSYLETLVDEIRAAGYVPDT-NSIHDVEDDVKVQLLNTHSEKLAIAFGLLNTSTGTPIHI 657

Query: 738 IKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
            KNLRVC DCH ATK+IS VTGR I+VRD +RFH FK GVCSCGDYW
Sbjct: 658 RKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHLFKDGVCSCGDYW 704


>gi|449458783|ref|XP_004147126.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Cucumis sativus]
          Length = 821

 Score =  596 bits (1536), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 301/770 (39%), Positives = 468/770 (60%), Gaps = 3/770 (0%)

Query: 15  LLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFL 74
           LL+   +  +L Q    +I +G  N+    TKL    S + +   A  +F  I      L
Sbjct: 55  LLELCTSMKELHQIIPLVIKNGLYNEHLFQTKLVSLFSKYGSINEAARVFEPIDDKLDAL 114

Query: 75  FNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHA 134
           ++ +++G++ N   ++++ F   +R +  + P  + ++++L       D   G  +HG  
Sbjct: 115 YHTMLKGYAKNSSLETALAFLCRMRYDD-VKPVVYNFTYLLKVCGDNADLKRGKEIHGQL 173

Query: 135 IVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSI 194
           I + + +++F    +V++Y K   +  A K+FD+MPE+D V WN++I+G  +N   + ++
Sbjct: 174 ITNSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKAL 233

Query: 195 WVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSF 254
            +   M ++ G   DS ++  VLPA A+V  L +G  I    ++ GF   V + T L   
Sbjct: 234 ELVLRM-QDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALADM 292

Query: 255 YSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTI 314
           YSKCG VE A L+F  + +  ++S N+M+ GY  NG+ E ++ +F ++L         TI
Sbjct: 293 YSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTI 352

Query: 315 VGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSE 374
           +  +      G L     +H F  +  + S+ SV+ +L ++YS+   ++ A  +F+  + 
Sbjct: 353 MEALHACADLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNG 412

Query: 375 KSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWV 434
           ++  SWNAMI GY QNG   EA++ F EM++  + P+  T+ S++ A A+L      KW+
Sbjct: 413 RTHVSWNAMILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKWI 472

Query: 435 HELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHG 494
           H L+     + NI+V+TAL+DMY+KCG I  AR+LFD++S +  +TWN MI GYG HG G
Sbjct: 473 HGLIIRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTHGLG 532

Query: 495 LEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYAC 554
             AL LF +M    + P+ +T+LSV+ ACSH+GLV EG   F+SM  D+G +P  +HY  
Sbjct: 533 RAALDLFDKMKKGAVEPNDITYLSVISACSHSGLVDEGLRHFKSMKQDYGLEPSMDHYGA 592

Query: 555 MVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPEN 614
           MVD+LGRAG++++A +FI+ + + PG  V+GA  GAC IHK+  +   A++KLFEL+P+ 
Sbjct: 593 MVDLLGRAGRIKEAWDFIENMPISPGITVYGAXXGACKIHKNIEVGEKAAKKLFELNPDE 652

Query: 615 VGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQS 674
            GYHVLL+NIY++   + + A VR+ ++K+ L K PGC+++E+    H F SG   HPQS
Sbjct: 653 GGYHVLLANIYASTSKWSKVAEVRKTMEKKGLKKTPGCSVVELRNEVHSFYSGSTTHPQS 712

Query: 675 TAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTE 734
             IYA LE+L  +++ AG+  +T   L DVE++ +E ++  HSEKLAIAFGL+ T PGT 
Sbjct: 713 KRIYAFLEELVYEIKAAGYVPDTNLIL-DVEDDVQEQLLNSHSEKLAIAFGLLNTSPGTT 771

Query: 735 IRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           I + KNLRVC DCH ATK+IS VTGR I+VRD  RFHHFK G+CSCGDYW
Sbjct: 772 IHVRKNLRVCGDCHNATKYISLVTGREIIVRDMQRFHHFKNGICSCGDYW 821


>gi|242094978|ref|XP_002437979.1| hypothetical protein SORBIDRAFT_10g005810 [Sorghum bicolor]
 gi|241916202|gb|EER89346.1| hypothetical protein SORBIDRAFT_10g005810 [Sorghum bicolor]
          Length = 657

 Score =  585 bits (1507), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 303/636 (47%), Positives = 420/636 (66%), Gaps = 26/636 (4%)

Query: 9   RNLFLSLLKGAKTQSQLTQTHAQIIIHG-FQNDLSTVTKLAHRLSDFKATC-YARALFFS 66
           R  +L L+  + T   L Q  A  +  G +  D + VT L  R +  +A   +   LF +
Sbjct: 20  RRSYLRLIALSSTLRHLDQLLAVSLASGHYALDPAPVTALLLRYASLRAPPRHLLRLFRA 79

Query: 67  IPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTAL-TPDNFTYSFVLSAASACC--- 122
            P+PD FL N ++R   +             LR +    +PD+F+++F  ++ S+ C   
Sbjct: 80  FPRPDRFLRNALLRSLPS-------------LRPHLLFPSPDSFSFAFAATSLSSSCSSR 126

Query: 123 --DRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSM 180
             D +    LHG ++ +GY +D FV +AL  LYFK S V  ARKVFD +P  DT+LWN++
Sbjct: 127 GRDAAAARTLHGLSVAAGYAADTFVASALAKLYFKLSKVDDARKVFDAVPSPDTILWNTL 186

Query: 181 ISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLG 240
           ++GL  +   +     F  MV  G    DST++A+ L A AE   + +G  +   G+K G
Sbjct: 187 LAGLPGSVALE----AFVRMVEVGRVRPDSTTLASSLRAAAEASHVAMGRCVHGYGVKCG 242

Query: 241 FHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFR 300
             +H +V+TGL+S YSKCG+++ A  LF  +  PDL++ NA+ISGY+ NG  ESS+ LF+
Sbjct: 243 LAEHEHVVTGLMSLYSKCGDMDCARSLFDRMEDPDLVAYNALISGYSVNGMVESSVELFK 302

Query: 301 QLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLN 360
           +L AS  R NSST+V +IPV+ PFGH  L  C+H+F +K+ + +++ V TAL+T+Y RLN
Sbjct: 303 ELAASDWRPNSSTLVAVIPVYSPFGHELLARCLHAFVVKARLDADALVSTALTTLYCRLN 362

Query: 361 EMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILS 420
           +ME+AR +FD   EK++ SWNAMI+GY QNGLTE A+ LFQ MQ   V PNP T+SS LS
Sbjct: 363 DMESARSIFDAMPEKTMESWNAMISGYAQNGLTEMAVELFQLMQELNVQPNPTTISSTLS 422

Query: 421 ACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVT 480
           ACAQLGA+SLG WVH ++   N E N+YV TALIDMYAKCG+I EAR +FD M +K+ V+
Sbjct: 423 ACAQLGALSLGTWVHRIIAKENLELNVYVMTALIDMYAKCGSIAEARSIFDRMDNKNVVS 482

Query: 481 WNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMI 540
           WN MISGYGLHG G EAL+L+  ML + I P+  TFLSVLYACSH GLV EG ++F+ M 
Sbjct: 483 WNAMISGYGLHGRGAEALKLYKSMLDACILPTSSTFLSVLYACSHGGLVDEGQKVFRVMT 542

Query: 541 HDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEP-GPAVWGALLGACMIHKDTNL 599
           +++   P  EH  CMVD+LGRAG+L +AL+ I        GP VWGALL ACM+HK+++L
Sbjct: 543 NEYRISPGIEHCTCMVDLLGRAGKLNEALDLISEFPQSAIGPGVWGALLSACMVHKNSDL 602

Query: 600 ARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAA 635
           A++AS+KLFELD EN GY+VLLSN+Y++++ Y +AA
Sbjct: 603 AKLASQKLFELDSENAGYYVLLSNLYTSKKHYSEAA 638


>gi|297849508|ref|XP_002892635.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297338477|gb|EFH68894.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 809

 Score =  582 bits (1499), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 300/770 (38%), Positives = 456/770 (59%), Gaps = 3/770 (0%)

Query: 15  LLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFL 74
           LL+   +  +L      I  +G   +    TKL      + +   A  +F  I K    L
Sbjct: 43  LLERCSSLKELRHILPLIFKNGLYQEHLFQTKLVSLFCRYGSVDEAARVFEPIDKKLNVL 102

Query: 75  FNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHA 134
           +  +++GF+       ++ F+  +R +  + P  + ++++L       +  +G  +HG  
Sbjct: 103 YYTMLKGFAKVSDLDKALKFFVRMRDDE-VEPVVYNFTYLLKVCGDEAELRVGKEIHGLL 161

Query: 135 IVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSI 194
           + SG+  DLF    L ++Y K   V  ARKVFD+MPE+D V WN++++G  +N   + ++
Sbjct: 162 VKSGFSLDLFAMTGLENMYAKCRQVHEARKVFDRMPERDLVSWNTIVAGYSQNGMARMAL 221

Query: 195 WVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSF 254
            +   M           ++ +VLPAV+ ++ +R+G EI    ++ GF   V + T LV  
Sbjct: 222 EMVNLMCEEN-LKPSFITIVSVLPAVSALRLIRIGKEIHGYAMRAGFDSLVNIATALVDM 280

Query: 255 YSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTI 314
           Y+KCG ++ A LLF  ++  +++S N+MI  Y  N   + ++ +F+++L    +    ++
Sbjct: 281 YAKCGSLKTARLLFDGMLERNVVSWNSMIDAYVQNENPKEAMVIFQKMLDEGVKPTDVSV 340

Query: 315 VGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSE 374
           +G +      G L     IH   ++  +  N SV+ +L ++Y +  E++ A  +F +   
Sbjct: 341 MGALHACADLGDLERGRFIHKLSVELELDRNVSVVNSLISMYCKCKEVDTAASMFGKLQS 400

Query: 375 KSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWV 434
           +++ SWNAMI G+ QNG   EA++ F +MQA  V P+  T  S+++A A+L      KW+
Sbjct: 401 RTIVSWNAMILGFAQNGRPIEALNYFSQMQARTVKPDTFTYVSVITAIAELSITHHAKWI 460

Query: 435 HELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHG 494
           H +V     + N++V+TAL+DMYAKCG I+ AR +FD+MS +   TWN MI GYG HG G
Sbjct: 461 HGVVMRNCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGIG 520

Query: 495 LEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYAC 554
             AL+LF EM    IRP+GVTFLSV+ ACSH+GLV  G + F  M  ++  +P  +HY  
Sbjct: 521 KAALELFEEMQKGTIRPNGVTFLSVISACSHSGLVEAGLKCFHMMKENYSIEPSMDHYGA 580

Query: 555 MVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPEN 614
           MVD+LGRAG+L +A +FI  + V+P   V+GA+LGAC IHK+ N A   +E+LFEL+PE+
Sbjct: 581 MVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKVAERLFELNPED 640

Query: 615 VGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQS 674
            GYHVLL+NIY A   + +   VR  + ++ L K PGC+++E+    H F SG   HP S
Sbjct: 641 GGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPSS 700

Query: 675 TAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTE 734
             IYA LEKL  +++EAG+  +T   L  +E++ KE ++  HSEKLAI+FGL+ T  GT 
Sbjct: 701 KKIYAFLEKLICQIKEAGYVPDTNLIL-GLEDDVKEQLLSSHSEKLAISFGLLNTTAGTT 759

Query: 735 IRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           I + KNLRVC DCH ATK+IS VTGR I+VRD  RFHHFK G CSCGDYW
Sbjct: 760 IHVRKNLRVCADCHNATKYISLVTGREIIVRDMQRFHHFKNGACSCGDYW 809


>gi|356510389|ref|XP_003523921.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Glycine max]
          Length = 818

 Score =  577 bits (1487), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 302/772 (39%), Positives = 461/772 (59%), Gaps = 8/772 (1%)

Query: 15  LLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFL 74
           LL+   ++ +L Q    II +GF N+    TK+      F +   A  +F  +      L
Sbjct: 53  LLENCTSKKELYQILPFIIKNGFYNEHLFQTKVISLFCKFGSNSEAARVFEHVELKLDVL 112

Query: 75  FNVIIRGFSNNEMPKSSICFYTHLRKNTA--LTPDNFTYSFVLSAASACCDRSIGVLLHG 132
           ++++++G++ N     ++CF+  +  +    +  D   Y+ +L       D   G  +HG
Sbjct: 113 YHIMLKGYAKNSSLGDALCFFLRMMCDEVRLVVGD---YACLLQLCGENLDLKKGREIHG 169

Query: 133 HAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQD 192
             I +G+ S+LFV  A++ LY K   + +A K+F++M  KD V W ++++G  +N   + 
Sbjct: 170 LIITNGFESNLFVMTAVMSLYAKCRQIDNAYKMFERMQHKDLVSWTTLVAGYAQNGHAKR 229

Query: 193 SIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLV 252
           ++ +   M +  G   DS ++ ++LPAVA+++ LR+G  I     + GF   V V   L+
Sbjct: 230 ALQLVLQM-QEAGQKPDSVTLVSILPAVADMKALRIGRSIHGYAFRSGFESLVNVTNALL 288

Query: 253 SFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSS 312
             Y KCG    A L+F+ +    ++S N MI G   NG++E +   F ++L   E     
Sbjct: 289 DMYFKCGSARIARLVFKGMRSKTVVSWNTMIDGCAQNGESEEAFATFLKMLDEGEVPTRV 348

Query: 313 TIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDES 372
           T++G++      G L     +H    K  + SN SV+ +L ++YS+   ++ A  +F+ +
Sbjct: 349 TMMGVLLACANLGDLERGWFVHKLLDKLKLDSNVSVMNSLISMYSKCKRVDIAASIFN-N 407

Query: 373 SEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGK 432
            EK+  +WNAMI GY QNG  +EA++LF  MQ+  +  +  T+  +++A A        K
Sbjct: 408 LEKTNVTWNAMILGYAQNGCVKEALNLFCMMQSQGIKLDCFTLVGVITALADFSVNRQAK 467

Query: 433 WVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHG 492
           W+H L      ++N++VSTAL+DMYAKCG I  AR+LFD+M  +  +TWN MI GYG HG
Sbjct: 468 WIHGLAVRACMDNNVFVSTALVDMYAKCGAIKTARKLFDMMQERHVITWNAMIDGYGTHG 527

Query: 493 HGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHY 552
            G E L LF+EM    ++P+ +TFLSV+ ACSH+G V EG  +F+SM  D+  +P  +HY
Sbjct: 528 VGKETLDLFNEMQKGAVKPNDITFLSVISACSHSGFVEEGLLLFKSMQEDYYLEPTMDHY 587

Query: 553 ACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDP 612
           + MVD+LGRAGQL+ A  FI+ + ++PG +V GA+LGAC IHK+  L   A++KLF+LDP
Sbjct: 588 SAMVDLLGRAGQLDDAWNFIQEMPIKPGISVLGAMLGACKIHKNVELGEKAAQKLFKLDP 647

Query: 613 ENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHP 672
           +  GYHVLL+NIY++   + + A VR  ++ + L K PGC+ +E+    H F SG   HP
Sbjct: 648 DEGGYHVLLANIYASNSMWDKVAKVRTAMEDKGLHKTPGCSWVELRNEIHTFYSGSTNHP 707

Query: 673 QSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPG 732
           +S  IYA LE L  +++ AG+  +   ++HDVEE+ K+ ++  HSE+LAIAFGL+ T PG
Sbjct: 708 ESKKIYAFLETLGDEIKAAGYVPDP-DSIHDVEEDVKKQLLSSHSERLAIAFGLLNTSPG 766

Query: 733 TEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           T + I KNLRVC DCH  TK+IS VTGR I+VRD  RFHHFK G CSCGDYW
Sbjct: 767 TTLHIRKNLRVCGDCHDTTKYISLVTGREIIVRDLRRFHHFKNGSCSCGDYW 818


>gi|15220337|ref|NP_172596.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122213654|sp|Q3E6Q1.1|PPR32_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g11290
 gi|332190592|gb|AEE28713.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 809

 Score =  573 bits (1477), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 297/770 (38%), Positives = 454/770 (58%), Gaps = 3/770 (0%)

Query: 15  LLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFL 74
           LL+   +  +L Q    +  +G   +    TKL      + +   A  +F  I      L
Sbjct: 43  LLERCSSLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVL 102

Query: 75  FNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHA 134
           ++ +++GF+       ++ F+  +R +  + P  + ++++L       +  +G  +HG  
Sbjct: 103 YHTMLKGFAKVSDLDKALQFFVRMRYDD-VEPVVYNFTYLLKVCGDEAELRVGKEIHGLL 161

Query: 135 IVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSI 194
           + SG+  DLF    L ++Y K   V  ARKVFD+MPE+D V WN++++G  +N   + ++
Sbjct: 162 VKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMAL 221

Query: 195 WVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSF 254
            +   M           ++ +VLPAV+ ++ + +G EI    ++ GF   V + T LV  
Sbjct: 222 EMVKSMCEEN-LKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDM 280

Query: 255 YSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTI 314
           Y+KCG +E A  LF  ++  +++S N+MI  Y  N   + ++ +F+++L    +    ++
Sbjct: 281 YAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSV 340

Query: 315 VGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSE 374
           +G +      G L     IH   ++ G+  N SV+ +L ++Y +  E++ A  +F +   
Sbjct: 341 MGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQS 400

Query: 375 KSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWV 434
           ++L SWNAMI G+ QNG   +A++ F +M++  V P+  T  S+++A A+L      KW+
Sbjct: 401 RTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWI 460

Query: 435 HELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHG 494
           H +V     + N++V+TAL+DMYAKCG I+ AR +FD+MS +   TWN MI GYG HG G
Sbjct: 461 HGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFG 520

Query: 495 LEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYAC 554
             AL+LF EM    I+P+GVTFLSV+ ACSH+GLV  G + F  M  ++  +   +HY  
Sbjct: 521 KAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGA 580

Query: 555 MVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPEN 614
           MVD+LGRAG+L +A +FI  + V+P   V+GA+LGAC IHK+ N A  A+E+LFEL+P++
Sbjct: 581 MVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDD 640

Query: 615 VGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQS 674
            GYHVLL+NIY A   + +   VR  + ++ L K PGC+++E+    H F SG   HP S
Sbjct: 641 GGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDS 700

Query: 675 TAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTE 734
             IYA LEKL   ++EAG+  +T   L  VE + KE ++  HSEKLAI+FGL+ T  GT 
Sbjct: 701 KKIYAFLEKLICHIKEAGYVPDTNLVL-GVENDVKEQLLSTHSEKLAISFGLLNTTAGTT 759

Query: 735 IRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           I + KNLRVC DCH ATK+IS VTGR IVVRD  RFHHFK G CSCGDYW
Sbjct: 760 IHVRKNLRVCADCHNATKYISLVTGREIVVRDMQRFHHFKNGACSCGDYW 809


>gi|359475368|ref|XP_003631669.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Vitis vinifera]
          Length = 891

 Score =  561 bits (1446), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 300/782 (38%), Positives = 464/782 (59%), Gaps = 10/782 (1%)

Query: 7   QSRNLFLSLLKGAKTQSQLTQT-HAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFF 65
           Q+  +  + L  + T++   +  HA +++ G    +   T+L +  ++      +R  F 
Sbjct: 116 QNEEIDFNFLFDSSTKTPFAKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFD 175

Query: 66  SIPKPDLFLFNVIIRGFSNNEMPKSSI-CFYTHLRKNTALTPDNFTYSFVLSAASACCDR 124
            IP+ D++ +N +I  + +N     +I CFY  L   + + PD +T+  VL A     D 
Sbjct: 176 QIPQKDVYAWNSMISAYVHNGHFHEAIGCFY-QLLLVSEIRPDFYTFPPVLKACGTLVD- 233

Query: 125 SIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGL 184
             G  +H  A   G+  ++FV A+L+ +Y +F +   AR +FD MP +D   WN+MISGL
Sbjct: 234 --GRKIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGL 291

Query: 185 MKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDH 244
           ++N     ++ V  +M R  G  ++  +V ++LP   ++ ++   M I    +K G    
Sbjct: 292 IQNGNAAQALDVLDEM-RLEGIKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFD 350

Query: 245 VYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLA 304
           ++V   L++ Y+K G +E A   F+ +   D++S N++I+ Y  N    ++   F ++  
Sbjct: 351 LFVSNALINMYAKFGNLEDARKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQL 410

Query: 305 SAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVL-TALSTVYSRLNEME 363
           +  + +  T+V L  +         +  +H F ++ G +    V+  A+  +Y++L  ++
Sbjct: 411 NGFQPDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLD 470

Query: 364 AARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASK-VAPNPVTVSSILSAC 422
           +A K+F+    K + SWN +I GY QNGL  EAI +++ M+  K + PN  T  SIL A 
Sbjct: 471 SAHKVFEIIPVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAY 530

Query: 423 AQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWN 482
           A +GA+  G  +H  V   N   +++V+T LID+Y KCG +V+A  LF  +  +S VTWN
Sbjct: 531 AHVGALQQGMKIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWN 590

Query: 483 TMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHD 542
            +IS +G+HGH  + L+LF EML  G++P  VTF+S+L ACSH+G V EG   F+ ++ +
Sbjct: 591 AIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFR-LMQE 649

Query: 543 HGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARV 602
           +G KP  +HY CMVD+LGRAG LE A +FIK + ++P  ++WGALLGAC IH +  L + 
Sbjct: 650 YGIKPSLKHYGCMVDLLGRAGYLEMAYDFIKDMPLQPDASIWGALLGACRIHGNIELGKF 709

Query: 603 ASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPH 662
           AS++LFE+D +NVGY+VLLSNIY+    +     VR + ++R L K PG + IEV     
Sbjct: 710 ASDRLFEVDSKNVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWSTIEVNRKVD 769

Query: 663 VFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAI 722
           VF +G+Q HP+   IY  L  L  KM+  G+  +    L DVEE+EKE ++  HSE+LAI
Sbjct: 770 VFYTGNQSHPKCKEIYEELRVLTAKMKSLGYIPDYSFVLQDVEEDEKEHILTSHSERLAI 829

Query: 723 AFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGD 782
           AFG+I+T P + IRI KNLRVC DCH ATKFIS++T R IVVRD+NRFHHFK G+CSCGD
Sbjct: 830 AFGIISTPPKSPIRIFKNLRVCGDCHNATKFISRITQREIVVRDSNRFHHFKDGICSCGD 889

Query: 783 YW 784
           YW
Sbjct: 890 YW 891


>gi|147795292|emb|CAN64990.1| hypothetical protein VITISV_001772 [Vitis vinifera]
          Length = 891

 Score =  559 bits (1441), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 300/782 (38%), Positives = 463/782 (59%), Gaps = 10/782 (1%)

Query: 7   QSRNLFLSLLKGAKTQSQLTQT-HAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFF 65
           Q+  +  + L  + T++   +  HA +++ G    +   T+L +  ++      +R  F 
Sbjct: 116 QNEEIDFNFLFDSSTKTPFAKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFD 175

Query: 66  SIPKPDLFLFNVIIRGFSNNEMPKSSI-CFYTHLRKNTALTPDNFTYSFVLSAASACCDR 124
            IP+ D++ +N +I  + +N     +I CFY  L   + + PD +T+  VL A     D 
Sbjct: 176 QIPQKDVYTWNSMISAYVHNGHFHEAIGCFY-QLLLVSEIRPDFYTFPPVLKACGTLVD- 233

Query: 125 SIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGL 184
             G  +H  A   G+  ++FV A+L+ +Y +F +   AR +FD MP +D   WN+MISGL
Sbjct: 234 --GRRIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGL 291

Query: 185 MKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDH 244
           ++N     ++ V  +M R  G  ++  +V ++LP   ++ ++   M I    +K G    
Sbjct: 292 IQNGNAAQALDVLDEM-RLEGIKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFD 350

Query: 245 VYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLA 304
           ++V   L++ Y+K G +E A   F+ +   D++S N++I+ Y  N    ++   F ++  
Sbjct: 351 LFVSNALINMYAKFGNLEDARKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQL 410

Query: 305 SAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVL-TALSTVYSRLNEME 363
           +  + +  T+V L  +         +  +H F ++ G +    V+  A+  +Y++L  ++
Sbjct: 411 NGFQPDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLD 470

Query: 364 AARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASK-VAPNPVTVSSILSAC 422
           +A K+F+    K + SWN +I GY QNGL  EAI +++ M+  K + PN  T  SIL A 
Sbjct: 471 SAHKVFEIILVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAY 530

Query: 423 AQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWN 482
           A +GA+  G  +H  V   N   +++V+T LID+Y KCG +V+A  LF  +  +S VTWN
Sbjct: 531 AHVGALQQGMRIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWN 590

Query: 483 TMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHD 542
            +IS +G+HGH  + L+LF EML  G++P  VTF+S+L ACSH+G V EG   F+ ++ +
Sbjct: 591 AIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFR-LMQE 649

Query: 543 HGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARV 602
           +G KP  +HY CMVD+LGRAG LE A  FIK + ++P  ++WGALLGAC IH +  L + 
Sbjct: 650 YGIKPSLKHYGCMVDLLGRAGYLEMAYGFIKDMPLQPDASIWGALLGACRIHGNIELGKF 709

Query: 603 ASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPH 662
           AS++LFE+D +NVGY+VLLSNIY+    +     VR + ++R L K PG + IEV     
Sbjct: 710 ASDRLFEVDSKNVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWSTIEVNRKVD 769

Query: 663 VFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAI 722
           VF +G+Q HP+   IY  L  L  KM+  G+  +    L DVEE+EKE ++  HSE+LAI
Sbjct: 770 VFYTGNQSHPKCKEIYEELRVLTAKMKSLGYIPDYSFVLQDVEEDEKEHILTSHSERLAI 829

Query: 723 AFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGD 782
           AFG+I+T P + IRI KNLRVC DCH ATKFIS++T R IVVRD+NRFHHFK G+CSCGD
Sbjct: 830 AFGIISTPPKSPIRIFKNLRVCGDCHNATKFISRITQREIVVRDSNRFHHFKDGICSCGD 889

Query: 783 YW 784
           YW
Sbjct: 890 YW 891


>gi|225439588|ref|XP_002265522.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g08820-like [Vitis vinifera]
          Length = 686

 Score =  558 bits (1439), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 292/631 (46%), Positives = 394/631 (62%), Gaps = 1/631 (0%)

Query: 154 FKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSV 213
           F FS     R +F ++ + +  LWN+MI GL+ N CF D+I  +G ++R+ G   ++ + 
Sbjct: 57  FDFSDTNYTRFLFHQIKQPNIFLWNTMIRGLVSNDCFDDAIEFYG-LMRSEGFLPNNFTF 115

Query: 214 AAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVR 273
             VL A A + +L+LG++I  L +K GF   V+V T LV  Y+KCG +E A  +F DI  
Sbjct: 116 PFVLKACARLLDLQLGVKIHTLVVKGGFDCDVFVKTSLVCLYAKCGYLEDAHKVFDDIPD 175

Query: 274 PDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCI 333
            +++S  A+ISGY   GK   ++ +FR+LL      +S TIV ++      G L+    I
Sbjct: 176 KNVVSWTAIISGYIGVGKFREAIDMFRRLLEMNLAPDSFTIVRVLSACTQLGDLNSGEWI 235

Query: 334 HSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLT 393
           H   ++ G+V N  V T+L  +Y++   ME AR +FD   EK + SW AMI GY  NGL 
Sbjct: 236 HKCIMEMGMVRNVFVGTSLVDMYAKCGNMEKARSVFDGMPEKDIVSWGAMIQGYALNGLP 295

Query: 394 EEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTAL 453
           +EAI LF +MQ   V P+  TV  +LSACA+LGA+ LG+WV  LV    F  N  + TAL
Sbjct: 296 KEAIDLFLQMQRENVKPDCYTVVGVLSACARLGALELGEWVSGLVDRNEFLYNPVLGTAL 355

Query: 454 IDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSG 513
           ID+YAKCG++  A E+F  M  K  V WN +ISG  ++G+   +  LF ++   GI+P G
Sbjct: 356 IDLYAKCGSMSRAWEVFKGMKEKDRVVWNAIISGLAMNGYVKISFGLFGQVEKLGIKPDG 415

Query: 514 VTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIK 573
            TF+ +L  C+HAGLV EG   F SM       P  EHY CMVD+LGRAG L++A + I+
Sbjct: 416 NTFIGLLCGCTHAGLVDEGRRYFNSMYRFFSLTPSIEHYGCMVDLLGRAGLLDEAHQLIR 475

Query: 574 GLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQ 633
            + +E    VWGALLGAC IH+DT LA +A ++L EL+P N G +VLLSNIYSA   + +
Sbjct: 476 NMPMEANAIVWGALLGACRIHRDTQLAELALKQLIELEPWNSGNYVLLSNIYSANLKWDE 535

Query: 634 AATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGF 693
           AA VR  + ++++ K PGC+ IEV G  H F  GD+ HP S  IYA L++L  KM+ AG+
Sbjct: 536 AAKVRLSMNEKRIQKPPGCSWIEVDGIVHEFLVGDKYHPLSEKIYAKLDELTKKMKVAGY 595

Query: 694 QTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKF 753
              T   L D+EEEEKE  +  HSEKLAIAFGLI+  P   IR++KNLRVC DCH A K 
Sbjct: 596 VPTTDFVLFDIEEEEKEHFLGCHSEKLAIAFGLISATPTAVIRVVKNLRVCGDCHMAIKL 655

Query: 754 ISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           IS +TGR I VRD NRFH F+ G CSC DYW
Sbjct: 656 ISSITGREITVRDNNRFHCFREGSCSCNDYW 686



 Score =  218 bits (555), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 130/441 (29%), Positives = 229/441 (51%), Gaps = 4/441 (0%)

Query: 53  DFKATCYARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYS 112
           DF  T Y R LF  I +P++FL+N +IRG  +N+    +I FY  +R    L P+NFT+ 
Sbjct: 58  DFSDTNYTRFLFHQIKQPNIFLWNTMIRGLVSNDCFDDAIEFYGLMRSEGFL-PNNFTFP 116

Query: 113 FVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEK 172
           FVL A +   D  +GV +H   +  G+  D+FV  +LV LY K  +++ A KVFD +P+K
Sbjct: 117 FVLKACARLLDLQLGVKIHTLVVKGGFDCDVFVKTSLVCLYAKCGYLEDAHKVFDDIPDK 176

Query: 173 DTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEI 232
           + V W ++ISG +    F+++I +F  ++       DS ++  VL A  ++ +L  G  I
Sbjct: 177 NVVSWTAIISGYIGVGKFREAIDMFRRLLEMNLA-PDSFTIVRVLSACTQLGDLNSGEWI 235

Query: 233 QCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKT 292
               +++G   +V+V T LV  Y+KCG +E+A  +F  +   D++S  AMI GY  NG  
Sbjct: 236 HKCIMEMGMVRNVFVGTSLVDMYAKCGNMEKARSVFDGMPEKDIVSWGAMIQGYALNGLP 295

Query: 293 ESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTAL 352
           + ++ LF Q+     + +  T+VG++      G L L   +     ++  + N  + TAL
Sbjct: 296 KEAIDLFLQMQRENVKPDCYTVVGVLSACARLGALELGEWVSGLVDRNEFLYNPVLGTAL 355

Query: 353 STVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNP 412
             +Y++   M  A ++F    EK    WNA+I+G   NG  + +  LF +++   + P+ 
Sbjct: 356 IDLYAKCGSMSRAWEVFKGMKEKDRVVWNAIISGLAMNGYVKISFGLFGQVEKLGIKPDG 415

Query: 413 VTVSSILSACAQLGAISLG-KWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFD 471
            T   +L  C   G +  G ++ + + +  +   +I     ++D+  + G + EA +L  
Sbjct: 416 NTFIGLLCGCTHAGLVDEGRRYFNSMYRFFSLTPSIEHYGCMVDLLGRAGLLDEAHQLIR 475

Query: 472 LMSHKSE-VTWNTMISGYGLH 491
            M  ++  + W  ++    +H
Sbjct: 476 NMPMEANAIVWGALLGACRIH 496


>gi|357118962|ref|XP_003561216.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Brachypodium distachyon]
          Length = 900

 Score =  557 bits (1435), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 282/675 (41%), Positives = 406/675 (60%), Gaps = 1/675 (0%)

Query: 110 TYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKM 169
           T++ +L   +A  D + G  +H      G   +     AL ++Y K      AR+VFD+M
Sbjct: 227 TFTSLLKLCAARADLATGRAVHAQLAARGLSPEALAATALANMYAKCRRPGDARRVFDRM 286

Query: 170 PEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLG 229
           P +D V WN++++G  +N   + ++ +   M    G   D+ ++ +VLPA A+ Q L   
Sbjct: 287 PARDRVAWNALVAGYARNGLAEAAVGMVVRMQEEDGERPDAVTLVSVLPACADAQALGAC 346

Query: 230 MEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCN 289
            E+    ++ GF + V V T ++  Y KCG V+ A  +F  +   + +S NAMI GY  N
Sbjct: 347 REVHAFAVRGGFDEQVNVSTAILDVYCKCGAVDSARKVFDGMQDRNSVSWNAMIKGYAEN 406

Query: 290 GKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVL 349
           G    +L LF++++     V   +++  +      G L     +H   ++ G+ SN +V+
Sbjct: 407 GDATEALALFKRMVGEGVDVTDVSVLAALHACGELGFLDEGRRVHELLVRIGLESNVNVM 466

Query: 350 TALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVA 409
            AL T+Y +    + A ++FDE   K+  SWNAMI G TQNG +E+A+ LF  MQ   V 
Sbjct: 467 NALITMYCKCKRTDLAAQVFDELGYKTRVSWNAMILGCTQNGSSEDAVRLFSRMQLENVK 526

Query: 410 PNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEAREL 469
           P+  T+ SI+ A A +      +W+H      + + ++YV TALIDMYAKCG +  AR L
Sbjct: 527 PDSFTLVSIIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVSIARSL 586

Query: 470 FDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLV 529
           F+    +  +TWN MI GYG HG G  A++LF EM  SG  P+  TFLSVL ACSHAGLV
Sbjct: 587 FNSARDRHVITWNAMIHGYGSHGSGKVAVELFEEMKSSGKVPNETTFLSVLSACSHAGLV 646

Query: 530 REGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLG 589
            EG E F SM  D+G +P  EHY  MVD+LGRAG+L +A  FI+ + +EPG +V+GA+LG
Sbjct: 647 DEGQEYFSSMKEDYGLEPGMEHYGTMVDLLGRAGKLHEAWSFIQKMPMEPGISVYGAMLG 706

Query: 590 ACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKA 649
           AC +HK+  LA  +++++FEL+PE   YHVLL+NIY+    +   A VR  ++K+ L K 
Sbjct: 707 ACKLHKNVELAEESAQRIFELEPEEGVYHVLLANIYANASLWKDVARVRTAMEKKGLQKT 766

Query: 650 PGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEK 709
           PG +++++    H F SG   H Q+  IYA L KL  +++  G+  +T  ++HDVE++ K
Sbjct: 767 PGWSIVQLKNEIHTFYSGSTNHQQAKDIYARLAKLIEEIKAVGYVPDT-DSIHDVEDDVK 825

Query: 710 ELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANR 769
             ++  HSEKLAIA+GLI T PGT I+I KNLRVC DCH ATK IS VTGR I++RD  R
Sbjct: 826 AQLLNTHSEKLAIAYGLIRTAPGTTIQIKKNLRVCKDCHNATKLISLVTGREIIMRDIQR 885

Query: 770 FHHFKGGVCSCGDYW 784
           FHHFK G CSCGDYW
Sbjct: 886 FHHFKDGKCSCGDYW 900



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 102/435 (23%), Positives = 184/435 (42%), Gaps = 42/435 (9%)

Query: 27  QTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNE 86
           + HA  +  GF   ++  T +        A   AR +F  +   +   +N +I+G++ N 
Sbjct: 348 EVHAFAVRGGFDEQVNVSTAILDVYCKCGAVDSARKVFDGMQDRNSVSWNAMIKGYAENG 407

Query: 87  MPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSI---GVLLHGHAIVSGYGSDL 143
               ++  +  +         + T   VL+A  AC +      G  +H   +  G  S++
Sbjct: 408 DATEALALFKRMVGEGV----DVTDVSVLAALHACGELGFLDEGRRVHELLVRIGLESNV 463

Query: 144 FVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRN 203
            V  AL+ +Y K      A +VFD++  K  V WN+MI G  +N   +D++ +F  M + 
Sbjct: 464 NVMNALITMYCKCKRTDLAAQVFDELGYKTRVSWNAMILGCTQNGSSEDAVRLFSRM-QL 522

Query: 204 GGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVER 263
                DS ++ +++PA+A++ +      I    ++L     VYVLT L+  Y+KCG V  
Sbjct: 523 ENVKPDSFTLVSIIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVSI 582

Query: 264 AELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYP 323
           A  LF       +I+ NAMI GY  +G  + ++ LF ++ +S +  N +T + ++     
Sbjct: 583 ARSLFNSARDRHVITWNAMIHGYGSHGSGKVAVELFEEMKSSGKVPNETTFLSVL----- 637

Query: 324 FGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAM 383
                      S C  +G+V            +S + E        D   E  +  +  M
Sbjct: 638 -----------SACSHAGLVDEG------QEYFSSMKE--------DYGLEPGMEHYGTM 672

Query: 384 IAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNF 443
           +    + G   EA S  Q+M    + P      ++L AC     + L +   + +     
Sbjct: 673 VDLLGRAGKLHEAWSFIQKM---PMEPGISVYGAMLGACKLHKNVELAEESAQRIFELEP 729

Query: 444 ESNIYVSTALIDMYA 458
           E  +Y    L ++YA
Sbjct: 730 EEGVY-HVLLANIYA 743



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 56/195 (28%), Positives = 92/195 (47%), Gaps = 4/195 (2%)

Query: 396 AISLFQEMQ-ASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALI 454
           A++ F  M  AS   P   T +S+L  CA    ++ G+ VH  + +R        +TAL 
Sbjct: 208 ALAAFAAMSPASGSGPVLRTFTSLLKLCAARADLATGRAVHAQLAARGLSPEALAATALA 267

Query: 455 DMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEML-HSGIRPSG 513
           +MYAKC    +AR +FD M  +  V WN +++GY  +G    A+ +   M    G RP  
Sbjct: 268 NMYAKCRRPGDARRVFDRMPARDRVAWNALVAGYARNGLAEAAVGMVVRMQEEDGERPDA 327

Query: 514 VTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIK 573
           VT +SVL AC+ A  +    E+    +   GF         ++D+  + G ++ A +   
Sbjct: 328 VTLVSVLPACADAQALGACREVHAFAVRG-GFDEQVNVSTAILDVYCKCGAVDSARKVFD 386

Query: 574 GLAVEPGPAVWGALL 588
           G+  +     W A++
Sbjct: 387 GMQ-DRNSVSWNAMI 400


>gi|225447423|ref|XP_002276196.1| PREDICTED: pentatricopeptide repeat-containing protein At3g12770
           [Vitis vinifera]
 gi|296081235|emb|CBI17979.3| unnamed protein product [Vitis vinifera]
          Length = 742

 Score =  556 bits (1432), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 275/655 (41%), Positives = 411/655 (62%), Gaps = 2/655 (0%)

Query: 130 LHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCC 189
           +H   +VSG     F+    V+  +    +  ARKVFD+ PE    LWN++I G   +  
Sbjct: 90  IHAQLVVSGLVESGFLVTKFVNASWNIGEIGYARKVFDEFPEPSVFLWNAIIRGYSSHNF 149

Query: 190 FQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLT 249
           F D+I ++  M +  G   D  ++  VL A + V  L +G  +     +LGF   V+V  
Sbjct: 150 FGDAIEMYSRM-QASGVNPDGFTLPCVLKACSGVPVLEVGKRVHGQIFRLGFESDVFVQN 208

Query: 250 GLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERV 309
           GLV+ Y+KCG VE+A ++F  +   +++S  +MISGY  NG    +LR+F Q+     + 
Sbjct: 209 GLVALYAKCGRVEQARIVFEGLDDRNIVSWTSMISGYGQNGLPMEALRIFGQMRQRNVKP 268

Query: 310 NSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLF 369
           +   +V ++  +     L     IH   +K G+     +L +L+ +Y++  ++  AR  F
Sbjct: 269 DWIALVSVLRAYTDVEDLEQGKSIHGCVVKMGLEFEPDLLISLTAMYAKCGQVMVARSFF 328

Query: 370 DESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAIS 429
           D+    ++  WNAMI+GY +NG T EA+ LFQEM +  +  + +TV S + ACAQ+G++ 
Sbjct: 329 DQMEIPNVMMWNAMISGYAKNGYTNEAVGLFQEMISKNIRTDSITVRSAILACAQVGSLD 388

Query: 430 LGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYG 489
           L KW+ + +    + ++++V+TALIDM+AKCG++  ARE+FD    K  V W+ MI GYG
Sbjct: 389 LAKWMGDYINKTEYRNDVFVNTALIDMFAKCGSVDLAREVFDRTLDKDVVVWSAMIVGYG 448

Query: 490 LHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLA 549
           LHG G +A+ LF  M  +G+ P+ VTF+ +L AC+H+GLV EG E+F SM + +G +   
Sbjct: 449 LHGRGQDAIDLFYAMKQAGVCPNDVTFVGLLTACNHSGLVEEGWELFHSMKY-YGIEARH 507

Query: 550 EHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFE 609
           +HYAC+VD+LGR+G L +A +FI  + +EPG +VWGALLGAC I++   L   A+E+LF 
Sbjct: 508 QHYACVVDLLGRSGHLNEAYDFITTMPIEPGVSVWGALLGACKIYRHVTLGEYAAEQLFS 567

Query: 610 LDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQ 669
           LDP N G++V LSN+Y++ R +   A VR +++++ L+K  G +LIE+ G    F  GD+
Sbjct: 568 LDPFNTGHYVQLSNLYASSRLWDSVAKVRILMREKGLSKDLGYSLIEINGKLQAFRVGDK 627

Query: 670 LHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIAT 729
            HP+   I+  LE L  +++EAGF     + LHD+ +EEKE  +  HSE+LAIA+GLI+T
Sbjct: 628 SHPRFKEIFEELESLERRLKEAGFIPHIESVLHDLNQEEKEETLCNHSERLAIAYGLIST 687

Query: 730 EPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
            PGT +RI KNLR C++CH+ATK ISK+  R IVVRDANRFHHFK GVCSC DYW
Sbjct: 688 APGTTLRITKNLRACINCHSATKLISKLVNREIVVRDANRFHHFKNGVCSCRDYW 742



 Score =  239 bits (611), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 153/498 (30%), Positives = 255/498 (51%), Gaps = 7/498 (1%)

Query: 10  NLFLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPK 69
           + F SLL  +  +  L Q HAQ+++ G       VTK  +   +     YAR +F   P+
Sbjct: 72  SFFSSLLDHSVHKRHLNQIHAQLVVSGLVESGFLVTKFVNASWNIGEIGYARKVFDEFPE 131

Query: 70  PDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVL 129
           P +FL+N IIRG+S++     +I  Y+ ++  + + PD FT   VL A S      +G  
Sbjct: 132 PSVFLWNAIIRGYSSHNFFGDAIEMYSRMQA-SGVNPDGFTLPCVLKACSGVPVLEVGKR 190

Query: 130 LHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCC 189
           +HG     G+ SD+FV   LV LY K   V+ AR VF+ + +++ V W SMISG  +N  
Sbjct: 191 VHGQIFRLGFESDVFVQNGLVALYAKCGRVEQARIVFEGLDDRNIVSWTSMISGYGQNGL 250

Query: 190 FQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLT 249
             +++ +FG M R      D  ++ +VL A  +V++L  G  I    +K+G      +L 
Sbjct: 251 PMEALRIFGQM-RQRNVKPDWIALVSVLRAYTDVEDLEQGKSIHGCVVKMGLEFEPDLLI 309

Query: 250 GLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERV 309
            L + Y+KCG+V  A   F  +  P+++  NAMISGY  NG T  ++ LF+++++   R 
Sbjct: 310 SLTAMYAKCGQVMVARSFFDQMEIPNVMMWNAMISGYAKNGYTNEAVGLFQEMISKNIRT 369

Query: 310 NSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLF 369
           +S T+   I      G L L   +  +  K+   ++  V TAL  ++++   ++ AR++F
Sbjct: 370 DSITVRSAILACAQVGSLDLAKWMGDYINKTEYRNDVFVNTALIDMFAKCGSVDLAREVF 429

Query: 370 DESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAIS 429
           D + +K +  W+AMI GY  +G  ++AI LF  M+ + V PN VT   +L+AC   G + 
Sbjct: 430 DRTLDKDVVVWSAMIVGYGLHGRGQDAIDLFYAMKQAGVCPNDVTFVGLLTACNHSGLVE 489

Query: 430 LGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVT-WNTMISGY 488
            G  +   +K    E+       ++D+  + G++ EA +    M  +  V+ W  ++   
Sbjct: 490 EGWELFHSMKYYGIEARHQHYACVVDLLGRSGHLNEAYDFITTMPIEPGVSVWGALLGAC 549

Query: 489 GLHGH----GLEALQLFS 502
            ++ H       A QLFS
Sbjct: 550 KIYRHVTLGEYAAEQLFS 567



 Score =  152 bits (385), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 84/275 (30%), Positives = 148/275 (53%), Gaps = 2/275 (0%)

Query: 326 HLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIA 385
           H    N IH+  + SG+V +  ++T        + E+  ARK+FDE  E S+  WNA+I 
Sbjct: 83  HKRHLNQIHAQLVVSGLVESGFLVTKFVNASWNIGEIGYARKVFDEFPEPSVFLWNAIIR 142

Query: 386 GYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFES 445
           GY+ +    +AI ++  MQAS V P+  T+  +L AC+ +  + +GK VH  +    FES
Sbjct: 143 GYSSHNFFGDAIEMYSRMQASGVNPDGFTLPCVLKACSGVPVLEVGKRVHGQIFRLGFES 202

Query: 446 NIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEML 505
           +++V   L+ +YAKCG + +AR +F+ +  ++ V+W +MISGYG +G  +EAL++F +M 
Sbjct: 203 DVFVQNGLVALYAKCGRVEQARIVFEGLDDRNIVSWTSMISGYGQNGLPMEALRIFGQMR 262

Query: 506 HSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQL 565
              ++P  +  +SVL A +    + +G  I   ++   G +   +    +  +  + GQ+
Sbjct: 263 QRNVKPDWIALVSVLRAYTDVEDLEQGKSIHGCVV-KMGLEFEPDLLISLTAMYAKCGQV 321

Query: 566 EKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLA 600
             A  F   + + P   +W A++     +  TN A
Sbjct: 322 MVARSFFDQMEI-PNVMMWNAMISGYAKNGYTNEA 355


>gi|147857367|emb|CAN80796.1| hypothetical protein VITISV_034275 [Vitis vinifera]
          Length = 771

 Score =  555 bits (1431), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 283/683 (41%), Positives = 419/683 (61%), Gaps = 11/683 (1%)

Query: 108 NFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFD 167
           NF    VL A        +G  +HG  +  G   D+FVG AL+ +Y + + V+ AR VFD
Sbjct: 94  NFMAPSVLKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFD 153

Query: 168 KMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDM----VRNGGTWLDSTSVAAVLPAVAEV 223
           KM E+D V W++MI  L +N  F  ++ +  +M    VR         ++ +++   A+ 
Sbjct: 154 KMMERDVVSWSTMIRSLSRNKEFDMALELIREMNFMQVRP-----SEVAMVSMVNLFADT 208

Query: 224 QELRLGMEIQCLGLKLGFHDHVYV--LTGLVSFYSKCGEVERAELLFRDIVRPDLISCNA 281
             +R+G  +    ++   ++H+ V   T L+  Y+KCG +  A  LF  + +  ++S  A
Sbjct: 209 ANMRMGKAMHAYVIRNSNNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTA 268

Query: 282 MISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSG 341
           MI+G   + + E   +LF ++       N  T++ LI      G L L   +H++ L++G
Sbjct: 269 MIAGCIRSNRLEEGTKLFIRMQEENIFPNEITMLSLIVECGFTGALQLGKQLHAYILRNG 328

Query: 342 IVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQ 401
              + ++ TAL  +Y + +++  AR LFD +  + +  W AM++ Y Q    ++A +LF 
Sbjct: 329 FSVSLALATALVDMYGKCSDIRNARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFD 388

Query: 402 EMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCG 461
           +M+ S V P  VT+ S+LS CA  GA+ LGKWVH  +     E +  ++TAL+DMYAKCG
Sbjct: 389 QMRTSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVEVDCILNTALVDMYAKCG 448

Query: 462 NIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLY 521
           +I  A  LF     +    WN +I+G+ +HG+G EAL +F+EM   G++P+ +TF+ +L+
Sbjct: 449 DINAAGRLFIEAISRDICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLH 508

Query: 522 ACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGP 581
           ACSHAGLV EG ++F+ M+H  G  P  EHY CMVD+LGRAG L++A E IK + ++P  
Sbjct: 509 ACSHAGLVTEGKKLFEKMVHTFGLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNT 568

Query: 582 AVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVV 641
            VWGAL+ AC +HK+  L  +A+ +L E++PEN GY+VL+SNIY+A   +  AA VR+ +
Sbjct: 569 IVWGALVAACRLHKNPQLGELAATQLLEIEPENCGYNVLMSNIYAAANRWSDAAGVRKTM 628

Query: 642 KKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTAL 701
           K   + K PG ++IEV GT H F  GDQ HPQ   I  ML ++  K+ EAG+  +T T L
Sbjct: 629 KTVGMKKEPGHSVIEVNGTVHEFLMGDQSHPQIRRINEMLAEMRRKLNEAGYVPDTSTVL 688

Query: 702 HDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRV 761
            +++EEEKE  +  HSEKLA+AFGLI+T P T IRI+KNLRVC DCH ATK +SK+ GRV
Sbjct: 689 LNIDEEEKETALTYHSEKLAMAFGLISTAPSTPIRIVKNLRVCNDCHAATKLLSKIYGRV 748

Query: 762 IVVRDANRFHHFKGGVCSCGDYW 784
           I+VRD NRFHHF+ G CSCGDYW
Sbjct: 749 IIVRDRNRFHHFREGYCSCGDYW 771



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/178 (23%), Positives = 80/178 (44%), Gaps = 1/178 (0%)

Query: 27  QTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNE 86
           Q HA I+ +GF   L+  T L            ARALF S    D+ ++  ++  ++   
Sbjct: 319 QLHAYILRNGFSVSLALATALVDMYGKCSDIRNARALFDSTQNRDVMIWTAMLSAYAQAN 378

Query: 87  MPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVG 146
               +   +  +R  + + P   T   +LS  +      +G  +H +        D  + 
Sbjct: 379 CIDQAFNLFDQMR-TSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVEVDCILN 437

Query: 147 AALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNG 204
            ALVD+Y K   + +A ++F +   +D  +WN++I+G   +   ++++ +F +M R G
Sbjct: 438 TALVDMYAKCGDINAAGRLFIEAISRDICMWNAIITGFAMHGYGEEALDIFAEMERQG 495


>gi|225440839|ref|XP_002276333.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Vitis vinifera]
          Length = 705

 Score =  553 bits (1426), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 291/681 (42%), Positives = 412/681 (60%), Gaps = 5/681 (0%)

Query: 106 PDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDL--FVGAALVDLYFKFSWVKSAR 163
           PDN+T  FV+ A     +  +G L+H   IV  +G DL  FV AALVD+Y K   ++ AR
Sbjct: 28  PDNYTLPFVIRACRDLKNLQMGRLIH--HIVYKFGLDLDHFVCAALVDMYVKCREIEDAR 85

Query: 164 KVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEV 223
            +FDKM E+D V W  MI G  +     +S+ +F  M R  G   D  ++  V+ A A++
Sbjct: 86  FLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKM-REEGVVPDKVAMVTVVFACAKL 144

Query: 224 QELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMI 283
             +     I     +  F   V + T ++  Y+KCG VE A  +F  +   ++IS +AMI
Sbjct: 145 GAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMI 204

Query: 284 SGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIV 343
           + Y  +G+   +L LFR +L+S    +  T+  L+       +L +   IH    K G+ 
Sbjct: 205 AAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLYACSDLKNLQMGRLIHHIVYKFGLD 264

Query: 344 SNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEM 403
            +  V  AL  +Y +  E+E AR LFD+  E+ L +W  MI GY + G   E++ LF +M
Sbjct: 265 LDHFVCAALVDMYGKCREIEDARFLFDKMPERDLVTWTVMIGGYAECGNANESLVLFDKM 324

Query: 404 QASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNI 463
           +   V P+ V + +++ ACA+LGA+   + + + ++ + F+ ++ + TA+IDM+AKCG +
Sbjct: 325 REEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCV 384

Query: 464 VEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYAC 523
             ARE+FD M  K+ ++W+ MI+ YG HG G +AL LF  ML SGI P+ +T +S+LYAC
Sbjct: 385 ESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYAC 444

Query: 524 SHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAV 583
           SHAGLV EG   F  M  D+  +   +HY C+VD+LGRAG+L++AL+ I+ + VE    +
Sbjct: 445 SHAGLVEEGLRFFSLMWEDYSVRADVKHYTCVVDLLGRAGRLDEALKLIESMTVEKDEGL 504

Query: 584 WGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKK 643
           WGA LGAC  HKD  LA  A+  L EL P+N G+++LLSNIY+    +   A  R ++ +
Sbjct: 505 WGAFLGACRTHKDVVLAEKAATSLLELQPQNPGHYILLSNIYANAGRWEDVAKTRDLMSQ 564

Query: 644 RKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHD 703
           R+L K PG T IEV    H F+ GD  HP+S  IY ML+ L  K+   G+  +T   LHD
Sbjct: 565 RRLKKIPGWTWIEVDNKSHQFSVGDTTHPRSKEIYEMLKSLGNKLELVGYVPDTNFVLHD 624

Query: 704 VEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIV 763
           V+EE K  ++  HSEKLAIAFGLIAT   T IRIIKNLRVC DCHT  K +S +TGRVI+
Sbjct: 625 VDEELKIGILYSHSEKLAIAFGLIATPEHTPIRIIKNLRVCGDCHTFCKLVSAITGRVII 684

Query: 764 VRDANRFHHFKGGVCSCGDYW 784
           VRDANRFHHFK G CSCGDYW
Sbjct: 685 VRDANRFHHFKEGACSCGDYW 705



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 105/330 (31%), Positives = 179/330 (54%), Gaps = 6/330 (1%)

Query: 282 MISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSG 341
           M+ G+   G   +    FR+L+    R ++ T+  +I       +L +   IH    K G
Sbjct: 1   MVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFG 60

Query: 342 IVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQ 401
           +  +  V  AL  +Y +  E+E AR LFD+  E+ L +W  MI GY + G   E++ LF+
Sbjct: 61  LDLDHFVCAALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFE 120

Query: 402 EMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCG 461
           +M+   V P+ V + +++ ACA+LGA+   + + + ++ + F+ ++ + TA+IDMYAKCG
Sbjct: 121 KMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCG 180

Query: 462 NIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLY 521
            +  ARE+FD M  K+ ++W+ MI+ YG HG G +AL LF  ML SG+ P  +T  S+LY
Sbjct: 181 CVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLY 240

Query: 522 ACSHAGLVREGDEIFQSMIHDHGFKPLAEHYAC--MVDILGRAGQLEKALEFIKGLAVEP 579
           ACS    ++ G  +   +++  G     +H+ C  +VD+ G+  ++E A  F+     E 
Sbjct: 241 ACSDLKNLQMG-RLIHHIVYKFGLD--LDHFVCAALVDMYGKCREIEDA-RFLFDKMPER 296

Query: 580 GPAVWGALLGACMIHKDTNLARVASEKLFE 609
               W  ++G      + N + V  +K+ E
Sbjct: 297 DLVTWTVMIGGYAECGNANESLVLFDKMRE 326



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 112/442 (25%), Positives = 203/442 (45%), Gaps = 35/442 (7%)

Query: 18  GAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNV 77
           GA  ++++   + Q     FQ D+   T +    +       AR +F  + + ++  ++ 
Sbjct: 145 GAMHKARIIDDYIQR--KKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSA 202

Query: 78  IIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVS 137
           +I  +  +   + ++  +  +  ++ + PD  T + +L A S   +  +G L+H   IV 
Sbjct: 203 MIAAYGYHGQGRKALDLF-RMMLSSGMLPDKITLASLLYACSDLKNLQMGRLIH--HIVY 259

Query: 138 GYGSDL--FVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIW 195
            +G DL  FV AALVD+Y K   ++ AR +FDKMPE+D V W  MI G  +     +S+ 
Sbjct: 260 KFGLDLDHFVCAALVDMYGKCREIEDARFLFDKMPERDLVTWTVMIGGYAECGNANESLV 319

Query: 196 VFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFY 255
           +F D +R  G   D  ++  V+ A A++  +     I     +  F   V + T ++  +
Sbjct: 320 LF-DKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMH 378

Query: 256 SKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIV 315
           +KCG VE A  +F  +   ++IS +AMI+ Y  +G+   +L LF  +L S    N  T+V
Sbjct: 379 AKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLV 438

Query: 316 GLIPVFYPFGHLHLT-NCIHSFCL---KSGIVSNSSVLTALSTVYSRLNEMEAARKLFDE 371
            L+   Y   H  L    +  F L      + ++    T +  +  R   ++ A KL + 
Sbjct: 439 SLL---YACSHAGLVEEGLRFFSLMWEDYSVRADVKHYTCVVDLLGRAGRLDEALKLIES 495

Query: 372 SS-EKSLASWNAMIAG---YTQNGLTEEAISLFQEMQASKVAPNP---VTVSSILSACAQ 424
            + EK    W A +     +    L E+A +   E+Q      NP   + +S+I +    
Sbjct: 496 MTVEKDEGLWGAFLGACRTHKDVVLAEKAATSLLELQPQ----NPGHYILLSNIYA---- 547

Query: 425 LGAISLGKWVHELVKSRNFESN 446
               + G+W  ++ K+R+  S 
Sbjct: 548 ----NAGRW-EDVAKTRDLMSQ 564


>gi|449439005|ref|XP_004137278.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Cucumis sativus]
 gi|449476583|ref|XP_004154777.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Cucumis sativus]
          Length = 816

 Score =  553 bits (1425), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 290/760 (38%), Positives = 451/760 (59%), Gaps = 6/760 (0%)

Query: 27  QTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNE 86
           Q HA +++ G    +    KL +R +      +AR  F  I   D++ +N +I  ++   
Sbjct: 61  QLHALLVVSGKTQSIFLSAKLINRYAFLGDIPHARLTFDQIQTKDVYTWNSMISAYARIG 120

Query: 87  MPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVG 146
              +++  +      + L  D++T+  V+ A   C +   G  +H   +  G+  D+++ 
Sbjct: 121 HFHAAVDCFNEFLSTSFLQSDHYTFPPVIRA---CGNLDDGRKVHCLVLKLGFECDVYIA 177

Query: 147 AALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGT 206
           A+ +  Y +F +V  A  +FD M  +D   WN+MISG   N    +++ VF +M R    
Sbjct: 178 ASFIHFYSRFGFVSLACNLFDNMMIRDIGTWNAMISGFYLNGKVAEALEVFDEM-RFKSV 236

Query: 207 WLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAEL 266
            +DS +++++LP   ++ ++  G+ I    +KLG    ++V   L++ Y+K GE+  AE 
Sbjct: 237 SMDSVTISSLLPICVQLDDIISGVLIHVYAIKLGLEFDLFVCNALINMYAKFGELRSAET 296

Query: 267 LFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGH 326
           +F  +   D++S N++++ +  N K   +L ++ ++ +     +  T+V L  V    G+
Sbjct: 297 IFNQMKVRDIVSWNSLLAAFEQNKKPVIALGVYNKMHSIGVVPDLLTLVSLASVAAELGN 356

Query: 327 LHLTNCIHSFCLKS-GIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIA 385
              +  IH F  +    + + ++  A+  +Y++L  +++ARK+F+    K + SWN++I 
Sbjct: 357 FLSSRSIHGFVTRRCWFLHDIALGNAIIDMYAKLGFIDSARKVFEGLPVKDVISWNSLIT 416

Query: 386 GYTQNGLTEEAISLFQEMQA-SKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFE 444
           GY+QNGL  EAI ++  M+  S   PN  T  SIL+A +QLGA+  G   H  +      
Sbjct: 417 GYSQNGLANEAIDVYSSMRYYSGAVPNQGTWVSILTAHSQLGALKQGMKAHGQLIKNFLY 476

Query: 445 SNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEM 504
            +I+VST L+DMY KCG + +A  LF  + H+S V+WN +IS +GLHG+GL+A++LF EM
Sbjct: 477 FDIFVSTCLVDMYGKCGKLADALSLFYEVPHQSSVSWNAIISCHGLHGYGLKAVKLFKEM 536

Query: 505 LHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQ 564
              G++P  +TF+S+L ACSH+GLV EG   FQ M   +G +P  +HY CMVD+ GRAG 
Sbjct: 537 QSEGVKPDHITFVSLLSACSHSGLVDEGQWCFQLMQETYGIRPSLKHYGCMVDLFGRAGH 596

Query: 565 LEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNI 624
           LEKA  F+K + V P  +VWGALLGAC IH++  L R  S+ L +++ ENVGY+VLLSNI
Sbjct: 597 LEKAFNFVKNMPVRPDVSVWGALLGACRIHENVELVRTVSDHLLKVESENVGYYVLLSNI 656

Query: 625 YSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKL 684
           Y+    +     VR + + R L K PG + IEV     VF +G+Q HP+   IY+ L  L
Sbjct: 657 YAKLGHWEGVDEVRSLARDRGLKKTPGWSSIEVDKKIDVFYTGNQTHPKCEEIYSELRNL 716

Query: 685 NGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVC 744
             KM+  G+  +    L DVE++EKE ++  HSE+LA+AFG+I+T P T ++I KNLRVC
Sbjct: 717 TAKMKSIGYVPDYNFVLQDVEDDEKENILTSHSERLAMAFGIISTPPKTTLQIFKNLRVC 776

Query: 745 LDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
            DCH ATKFISK+T R I+VRD+NRFHHFK GVCSCGDYW
Sbjct: 777 GDCHNATKFISKITEREIIVRDSNRFHHFKDGVCSCGDYW 816



 Score =  221 bits (564), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 139/476 (29%), Positives = 247/476 (51%), Gaps = 7/476 (1%)

Query: 121 CCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSM 180
           C    +   LH   +VSG    +F+ A L++ Y     +  AR  FD++  KD   WNSM
Sbjct: 53  CTKVHLAKQLHALLVVSGKTQSIFLSAKLINRYAFLGDIPHARLTFDQIQTKDVYTWNSM 112

Query: 181 ISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLG 240
           IS   +   F  ++  F + +       D  +   V+ A   + +   G ++ CL LKLG
Sbjct: 113 ISAYARIGHFHAAVDCFNEFLSTSFLQSDHYTFPPVIRACGNLDD---GRKVHCLVLKLG 169

Query: 241 FHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFR 300
           F   VY+    + FYS+ G V  A  LF +++  D+ + NAMISG+  NGK   +L +F 
Sbjct: 170 FECDVYIAASFIHFYSRFGFVSLACNLFDNMMIRDIGTWNAMISGFYLNGKVAEALEVFD 229

Query: 301 QLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLN 360
           ++   +  ++S TI  L+P+      +     IH + +K G+  +  V  AL  +Y++  
Sbjct: 230 EMRFKSVSMDSVTISSLLPICVQLDDIISGVLIHVYAIKLGLEFDLFVCNALINMYAKFG 289

Query: 361 EMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILS 420
           E+ +A  +F++   + + SWN+++A + QN     A+ ++ +M +  V P+ +T+ S+ S
Sbjct: 290 ELRSAETIFNQMKVRDIVSWNSLLAAFEQNKKPVIALGVYNKMHSIGVVPDLLTLVSLAS 349

Query: 421 ACAQLGAISLGKWVHELVKSRN-FESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEV 479
             A+LG     + +H  V  R  F  +I +  A+IDMYAK G I  AR++F+ +  K  +
Sbjct: 350 VAAELGNFLSSRSIHGFVTRRCWFLHDIALGNAIIDMYAKLGFIDSARKVFEGLPVKDVI 409

Query: 480 TWNTMISGYGLHGHGLEALQLFSEM-LHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQS 538
           +WN++I+GY  +G   EA+ ++S M  +SG  P+  T++S+L A S  G +++G +    
Sbjct: 410 SWNSLITGYSQNGLANEAIDVYSSMRYYSGAVPNQGTWVSILTAHSQLGALKQGMKAHGQ 469

Query: 539 MIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIH 594
           +I +  +  +     C+VD+ G+ G+L  AL     +  +   + W A++    +H
Sbjct: 470 LIKNFLYFDIFVS-TCLVDMYGKCGKLADALSLFYEVPHQSSVS-WNAIISCHGLH 523


>gi|359475558|ref|XP_003631701.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Vitis vinifera]
          Length = 848

 Score =  553 bits (1425), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 301/777 (38%), Positives = 460/777 (59%), Gaps = 11/777 (1%)

Query: 12  FLSLLKGAKTQSQLTQTHAQIIIHG-FQNDLSTVTKLAHRLSDFKATCYARALFFSIPKP 70
           F SL           + HA +++ G  Q++  ++ +L +  +       +R  F  I + 
Sbjct: 79  FNSLFDSCTKTLLAKRLHALLVVSGKIQSNFISI-RLVNLYASLGDVSLSRGTFDQIQRK 137

Query: 71  DLFLFNVIIRGFSNNEMPKSSI-CFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVL 129
           D++ +N +I  +  N   + +I CFY  L   T    D +T+  VL A     D   G  
Sbjct: 138 DVYTWNSMISAYVRNGHFREAIDCFY-QLLLVTKFQADFYTFPPVLKACQTLVD---GRK 193

Query: 130 LHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCC 189
           +H      G+  D+FV A+L+ +Y +F +V  AR +FD MP +D   WN+MISGL++N  
Sbjct: 194 IHCWVFKLGFQWDVFVAASLIHMYSRFGFVGIARSLFDDMPFRDMGSWNAMISGLIQNGN 253

Query: 190 FQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLT 249
              ++ V  +M R  G  +DS +VA++LP  A++ ++     I    +K G    ++V  
Sbjct: 254 AAQALDVLDEM-RLEGINMDSVTVASILPVCAQLGDISTATLIHLYVIKHGLEFELFVSN 312

Query: 250 GLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERV 309
            L++ Y+K G +  A+ +F+ +   D++S N++I+ Y  N    ++   F ++  +    
Sbjct: 313 ALINMYAKFGNLGDAQKVFQQMFLRDVVSWNSIIAAYEQNDDPVTARGFFFKMQLNGLEP 372

Query: 310 NSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVL-TALSTVYSRLNEMEAARKL 368
           +  T+V L  +         +  +H F ++ G +  + V+  A+  +Y++L  +++A K+
Sbjct: 373 DLLTLVSLASIAAQSRDYKNSRSVHGFIMRRGWLMEAVVIGNAVMDMYAKLGVIDSAHKV 432

Query: 369 FDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASK-VAPNPVTVSSILSACAQLGA 427
           F+    K + SWN +I+GYTQNGL  EAI +++ M+  + +  N  T  SIL+A A +GA
Sbjct: 433 FNLIPVKDVVSWNTLISGYTQNGLASEAIEVYRMMEECREIKLNQGTWVSILAAYAHVGA 492

Query: 428 ISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISG 487
           +  G  +H  +   N   +++V T LID+Y KCG +V+A  LF  +  +S V WN +IS 
Sbjct: 493 LQQGMRIHGHLIKTNLHLDVFVGTCLIDLYGKCGRLVDAMCLFYQVPRESSVPWNAIISC 552

Query: 488 YGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKP 547
           +G+HGHG +AL+LF EM   G++P  VTF+S+L ACSH+GLV EG   F  ++ ++G KP
Sbjct: 553 HGIHGHGEKALKLFREMQDEGVKPDHVTFISLLSACSHSGLVDEGKWFFH-LMQEYGIKP 611

Query: 548 LAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKL 607
             +HY CMVD+LGRAG LE A +FIK + + P  ++WGALLGAC IH +  L + AS++L
Sbjct: 612 SLKHYGCMVDLLGRAGFLEMAYDFIKDMPLHPDASIWGALLGACRIHGNIELGKFASDRL 671

Query: 608 FELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSG 667
           FE+D ENVGY+VLLSNIY+    +     VR + ++R L K PG + IEV     +F +G
Sbjct: 672 FEVDSENVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWSSIEVNRRVDIFYTG 731

Query: 668 DQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLI 727
           +Q HP+   IYA L  L  KM+  G+  +    L DVEE+EKE ++  HSE+LAIAFG+I
Sbjct: 732 NQSHPKCKEIYAELRILTAKMKSLGYIPDYSFVLQDVEEDEKEHILTSHSERLAIAFGII 791

Query: 728 ATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           +T P + IRI KNLRVC DCH ATKFIS++T R IVVRD+ RFHHFK G+CSCGDYW
Sbjct: 792 STPPKSAIRIFKNLRVCGDCHNATKFISRITEREIVVRDSKRFHHFKNGICSCGDYW 848


>gi|225451187|ref|XP_002271063.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Vitis vinifera]
          Length = 805

 Score =  551 bits (1419), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 299/775 (38%), Positives = 446/775 (57%), Gaps = 5/775 (0%)

Query: 12  FLSLLK-GAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKP 70
           FLSLL+  +K    +  THAQII +    D    TKL    SD ++   AR +F    +P
Sbjct: 34  FLSLLRESSKNLIWVKSTHAQIITNSLSTDQFVATKLVKAYSDLRSLEAARYVFDQFFQP 93

Query: 71  DLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLL 130
              L N ++ G+  +   + ++  +  +R    L  D+ + +F L A ++  D  +G+ +
Sbjct: 94  KGLLCNAMLCGYLQSGRYRETLELFGLMRSRN-LEVDSCSCTFALKACASSLDYEMGMEI 152

Query: 131 HGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCF 190
              A+  G   + FVG++++    KF  +  A++VFD MP KD V WNS+I G ++  CF
Sbjct: 153 ISSAVEKGMEKNRFVGSSMISFLVKFGKIGEAQRVFDGMPNKDVVCWNSIIGGYVQAGCF 212

Query: 191 QDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTG 250
             +  +F +M    G      ++ +++ A   +  L+LG  +    L LG  + + VLT 
Sbjct: 213 DVAFQLFFEM-HGSGIKPSPITMTSLIQACGGIGNLKLGKCMHGYVLGLGLGNDILVLTS 271

Query: 251 LVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVN 310
            V  YSK G++E A  +F  +   +L+S NAMISG   NG    S  LF +L+ S+   +
Sbjct: 272 FVDMYSKMGDIESARWVFYKMPTRNLVSWNAMISGCVRNGLVGESFDLFHRLVRSSGGFD 331

Query: 311 SSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFD 370
            +TIV L+        L     +H   ++S   SN  + TA+  +YS+   ++ A  +F+
Sbjct: 332 LTTIVSLLQGCSQTASLATGKILHGCAIRS-FESNLILSTAIVDLYSKCGSLKQATFVFN 390

Query: 371 ESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISL 430
              ++++ +W AM+ G  QNG  E+A+ LF +MQ   +A N VT  S++ +CA LG++  
Sbjct: 391 RMKDRNVITWTAMLVGLAQNGHAEDALRLFAQMQEEGIAANSVTFVSLVHSCAHLGSLKR 450

Query: 431 GKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMS-HKSEVTWNTMISGYG 489
           G+ +H  +    F  +I   TAL+DMYAKCG I  A  +F   S  K  V WN+MI+GYG
Sbjct: 451 GRSIHGHLFRLGFAFDIVNMTALVDMYAKCGKINLAERIFSHGSISKDVVLWNSMITGYG 510

Query: 490 LHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLA 549
           +HGHG +A+ ++ +M+  G++P+  TFLS+L ACSH+ LV +G  +F SM  DH  +P+ 
Sbjct: 511 MHGHGYQAVGIYHKMIEEGLKPNQTTFLSLLSACSHSRLVEQGISLFNSMERDHNIRPIE 570

Query: 550 EHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFE 609
           +HYAC+VD+L RAG+ E+A   I+ +  +PG AV  ALL  C  HK+ NL    S+KL  
Sbjct: 571 KHYACLVDLLSRAGRFEEAQALIEKMPFQPGTAVLEALLSGCRTHKNINLGIQTSDKLLA 630

Query: 610 LDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQ 669
           LD  N G +++LSNIY+  R + +   +R +++ R L K PG +L+E G   H F +GD 
Sbjct: 631 LDAMNPGIYIMLSNIYAEARRWDKVDYIRGLMRNRGLKKTPGYSLVETGNWVHTFFAGDN 690

Query: 670 LHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIAT 729
            HP    IY  LE L   +  +G+  +T   L DV+EE K  M+  HSE+LAIAFGL+ T
Sbjct: 691 SHPNWEEIYHFLESLRSAVETSGYVPDTSCVLRDVDEEMKVRMLWGHSERLAIAFGLLTT 750

Query: 730 EPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
             G+ IRI KNLRVC DCHT TK+ISK+  R I+VRDANRFHHF  G CSCGDYW
Sbjct: 751 PAGSLIRITKNLRVCGDCHTVTKYISKIVKREIIVRDANRFHHFSNGECSCGDYW 805


>gi|359483488|ref|XP_002273710.2| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Vitis vinifera]
          Length = 933

 Score =  548 bits (1411), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 296/776 (38%), Positives = 452/776 (58%), Gaps = 5/776 (0%)

Query: 12  FLSLLKGAKTQSQL---TQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIP 68
           F S+LK       L    Q H  +++ GF+ D+     L    +       ++ LF  IP
Sbjct: 160 FSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIP 219

Query: 69  KPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGV 128
           + ++  +N +   +   +    ++  +  +   + + P+ F+ S +++A +   D S G 
Sbjct: 220 ERNVVSWNALFSCYVQIDFCGEAVGLFYEMVL-SGIKPNEFSLSSMVNACTGLRDSSRGK 278

Query: 129 LLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNC 188
           ++HG+ I  GY  D F   ALVD+Y K   +  A  VF+K+ + D V WN++I+G + + 
Sbjct: 279 IIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHE 338

Query: 189 CFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVL 248
             + ++ + G M R+G    +  ++++ L A A +    LG ++    +K+     ++V 
Sbjct: 339 HHEQALELLGQMKRSG-ICPNIFTLSSALKACAGMGLKELGRQLHSSLMKMDMESDLFVS 397

Query: 249 TGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAER 308
            GLV  YSKC  +E A + F  +   DLI+ NA+ISGY+   +   +L LF ++      
Sbjct: 398 VGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIG 457

Query: 309 VNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKL 368
            N +T+  ++        +H+   +H   +KSG  S+  V+ +L   Y + + +E A ++
Sbjct: 458 FNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERI 517

Query: 369 FDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAI 428
           F+E +   L S+ +MI  Y Q G  EEA+ LF EMQ  ++ P+    SS+L+ACA L A 
Sbjct: 518 FEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACANLSAF 577

Query: 429 SLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGY 488
             GK +H  +    F  +I+   +L++MYAKCG+I +A   F  ++ +  V+W+ MI G 
Sbjct: 578 EQGKQLHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSELTERGIVSWSAMIGGL 637

Query: 489 GLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPL 548
             HGHG +ALQLF++ML  G+ P+ +T +SVL AC+HAGLV E    F+SM    GFKP+
Sbjct: 638 AQHGHGRQALQLFNQMLKEGVSPNHITLVSVLGACNHAGLVTEAKLYFESMEELFGFKPM 697

Query: 549 AEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLF 608
            EHYACM+D+LGRAG++ +A+E +  +  E   +VWGALLGA  IHKD  L R A+E LF
Sbjct: 698 QEHYACMIDLLGRAGKINEAVELVNKMPFEANASVWGALLGAARIHKDVELGRRAAEMLF 757

Query: 609 ELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGD 668
            L+PE  G HVLL+NIY++   +   A VR++++  K+ K PG + IEV    + F  GD
Sbjct: 758 ILEPEKSGTHVLLANIYASAGKWENVAEVRRLMRDSKVKKEPGMSWIEVKDKVYTFLVGD 817

Query: 669 QLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIA 728
           + H +S  IYA L++L+  M +AG+       LHDVE+ EKEL++  HSEKLA+AFGLIA
Sbjct: 818 RSHYRSQEIYAKLDELSDLMDKAGYVPMVEIDLHDVEQSEKELLLYHHSEKLAVAFGLIA 877

Query: 729 TEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           T  G  IR+ KNLRVC+DCHTA K+I K+  R I+VRD NRFHHFK G CSCGDYW
Sbjct: 878 TPQGAPIRVKKNLRVCVDCHTAFKYICKIVSREIIVRDINRFHHFKDGSCSCGDYW 933



 Score =  243 bits (619), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 168/568 (29%), Positives = 287/568 (50%), Gaps = 4/568 (0%)

Query: 27  QTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNE 86
           Q HA I   G  +D S    L +  S  +   YAR L     +PDL  ++ +I G++ N 
Sbjct: 77  QIHAHITKSGLSDDPSIRNHLINLYSKCRNFGYARKLVDESSEPDLVSWSALISGYAQNG 136

Query: 87  MPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVG 146
           +   ++  + H      +  + FT+S VL A S   D  IG  +HG  +VSG+  D+FV 
Sbjct: 137 LGGGALMAF-HEMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFVA 195

Query: 147 AALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGT 206
             LV +Y K      ++++FD++PE++ V WN++ S  ++     +++ +F +MV + G 
Sbjct: 196 NTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQIDFCGEAVGLFYEMVLS-GI 254

Query: 207 WLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAEL 266
             +  S+++++ A   +++   G  I    +KLG+    +    LV  Y+K G++  A  
Sbjct: 255 KPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAIS 314

Query: 267 LFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGH 326
           +F  I +PD++S NA+I+G   +   E +L L  Q+  S    N  T+   +      G 
Sbjct: 315 VFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKRSGICPNIFTLSSALKACAGMGL 374

Query: 327 LHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAG 386
             L   +HS  +K  + S+  V   L  +YS+ + +E AR  F+   EK L +WNA+I+G
Sbjct: 375 KELGRQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISG 434

Query: 387 YTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESN 446
           Y+Q     EA+SLF EM    +  N  T+S+IL + A L  + + + VH L     F S+
Sbjct: 435 YSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSD 494

Query: 447 IYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLH 506
           IYV  +LID Y KC ++ +A  +F+  +    V++ +MI+ Y  +G G EAL+LF EM  
Sbjct: 495 IYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQD 554

Query: 507 SGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLE 566
             ++P      S+L AC++     +G ++   ++  +GF         +V++  + G ++
Sbjct: 555 MELKPDRFVCSSLLNACANLSAFEQGKQLHVHIL-KYGFVLDIFAGNSLVNMYAKCGSID 613

Query: 567 KALEFIKGLAVEPGPAVWGALLGACMIH 594
            A      L  E G   W A++G    H
Sbjct: 614 DAGRAFSEL-TERGIVSWSAMIGGLAQH 640



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 150/523 (28%), Positives = 259/523 (49%), Gaps = 38/523 (7%)

Query: 104 LTPDNFTYSFVLSAASACCDRSI--GVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKS 161
            TP + +YS +LS    C  +S+  G+ +H H   SG   D  +   L++LY K      
Sbjct: 52  FTPTSVSYSKLLS--QCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRNFGY 109

Query: 162 ARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVA 221
           ARK+ D+  E D V W+++ISG  +N     ++  F +M    G   +  + ++VL A +
Sbjct: 110 ARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEM-HLLGVKCNEFTFSSVLKACS 168

Query: 222 EVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNA 281
            V++LR+G ++  + +  GF   V+V   LV  Y+KC E   ++ LF +I   +++S NA
Sbjct: 169 IVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNA 228

Query: 282 MISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSG 341
           + S Y        ++ LF +++ S  + N  ++  ++              IH + +K G
Sbjct: 229 LFSCYVQIDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLG 288

Query: 342 IVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQ 401
              +     AL  +Y+++ ++  A  +F++  +  + SWNA+IAG   +   E+A+ L  
Sbjct: 289 YDWDPFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLG 348

Query: 402 EMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCG 461
           +M+ S + PN  T+SS L ACA +G   LG+ +H  +   + ES+++VS  L+DMY+KC 
Sbjct: 349 QMKRSGICPNIFTLSSALKACAGMGLKELGRQLHSSLMKMDMESDLFVSVGLVDMYSKCD 408

Query: 462 NIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTF----- 516
            + +AR  F+L+  K  + WN +ISGY  +   +EAL LF EM   GI  +  T      
Sbjct: 409 LLEDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILK 468

Query: 517 ----LSVLYACS--HAGLVREG--DEIF--QSMIHDHGFKPLAEH--------------- 551
               L V++ C   H   V+ G   +I+   S+I  +G     E                
Sbjct: 469 STAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVS 528

Query: 552 YACMVDILGRAGQLEKALEF---IKGLAVEPGPAVWGALLGAC 591
           +  M+    + GQ E+AL+    ++ + ++P   V  +LL AC
Sbjct: 529 FTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNAC 571



 Score =  178 bits (452), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 105/342 (30%), Positives = 175/342 (51%)

Query: 199 DMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKC 258
           +++  G     S S + +L      + LR G++I     K G  D   +   L++ YSKC
Sbjct: 45  NLIDKGNFTPTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKC 104

Query: 259 GEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLI 318
                A  L  +   PDL+S +A+ISGY  NG    +L  F ++     + N  T   ++
Sbjct: 105 RNFGYARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVL 164

Query: 319 PVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLA 378
                   L +   +H   + SG   +  V   L  +Y++ +E   +++LFDE  E+++ 
Sbjct: 165 KACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVV 224

Query: 379 SWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELV 438
           SWNA+ + Y Q     EA+ LF EM  S + PN  ++SS+++AC  L   S GK +H  +
Sbjct: 225 SWNALFSCYVQIDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYL 284

Query: 439 KSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEAL 498
               ++ + + + AL+DMYAK G++ +A  +F+ +     V+WN +I+G  LH H  +AL
Sbjct: 285 IKLGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQAL 344

Query: 499 QLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMI 540
           +L  +M  SGI P+  T  S L AC+  GL   G ++  S++
Sbjct: 345 ELLGQMKRSGICPNIFTLSSALKACAGMGLKELGRQLHSSLM 386


>gi|328774753|gb|AEB39776.1| pentatricopeptide repeat protein 78 [Funaria hygrometrica]
          Length = 1020

 Score =  545 bits (1403), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 297/781 (38%), Positives = 446/781 (57%), Gaps = 9/781 (1%)

Query: 9    RNLFLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATC----YARALF 64
            R   + LL   K+ S L +   +I +   +  L     +A+ + +  A C     AR +F
Sbjct: 244  RATTMRLLSSCKSPSAL-ECGREIHVEAMKARLLFDVNVANCILNMYAKCGSIHEAREVF 302

Query: 65   FSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLR-KNTALTPDNFTYSFVLSAASACCD 123
              +    +  + +II G++  +   S I F    + +   + P+  TY  VL+A S    
Sbjct: 303  DKMETKSVVSWTIIIGGYA--DCGHSEIAFEIFQKMQQEGVVPNRITYINVLNAFSGPAA 360

Query: 124  RSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISG 183
               G  +H H + +G+ SDL VG ALV +Y K    K  R+VF+K+  +D + WN+MI G
Sbjct: 361  LKWGKTVHSHILNAGHESDLAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGG 420

Query: 184  LMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHD 243
            L +   ++++  ++  M R G    +  +   +L A      L  G EI    +K GF  
Sbjct: 421  LAEGGNWEEASEIYHQMQREG-MMPNKITYVILLNACVNPTALHWGREIHSRVVKDGFMF 479

Query: 244  HVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLL 303
             + V   L+S Y++CG ++ A LLF  +VR D+IS  AMI G   +G    +L +F+ + 
Sbjct: 480  DISVQNALISMYARCGSIKDARLLFNKMVRKDIISWTAMIGGLAKSGLGAEALAVFQDMQ 539

Query: 304  ASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEME 363
             +  + N  T   ++        L     IH   +++G+ +++ V   L  +YS    ++
Sbjct: 540  QAGLKPNRVTYTSILNACSSPAALDWGRRIHQQVIEAGLATDAHVANTLVNMYSMCGSVK 599

Query: 364  AARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACA 423
             AR++FD  +++ + ++NAMI GY  + L +EA+ LF  +Q   + P+ VT  ++L+ACA
Sbjct: 600  DARQVFDRMTQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNACA 659

Query: 424  QLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNT 483
              G++   K +H LV    + S+  +  AL+  YAKCG+  +A  +FD M  ++ ++WN 
Sbjct: 660  NSGSLEWAKEIHSLVLKDGYLSDTSLGNALVSTYAKCGSFSDALLVFDKMMKRNVISWNA 719

Query: 484  MISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDH 543
            +I G   HG G + LQLF  M   GI+P  VTF+S+L ACSHAGL+ EG   F SM  D 
Sbjct: 720  IIGGCAQHGRGQDVLQLFERMKMEGIKPDIVTFVSLLSACSHAGLLEEGRRYFCSMSRDF 779

Query: 544  GFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVA 603
            G  P  EHY CMVD+LGRAGQL++    IK +  +    +WGALLGAC IH +  +A  A
Sbjct: 780  GITPTIEHYGCMVDLLGRAGQLDEVEALIKTMPFQANTRIWGALLGACRIHGNVPVAERA 839

Query: 604  SEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHV 663
            +E   +LDP+N   +V LS++Y+A   +  AA +R+++++R + K PG + IEVG   H 
Sbjct: 840  AESSLKLDPDNAAVYVALSHMYAAAGMWDSAAKLRKLMEQRGVTKEPGRSWIEVGDKLHY 899

Query: 664  FTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIA 723
            F + D+ HP+S  IYA L+KL   M+  G+  +T + +HDV+E EKE  +  HSE+LAIA
Sbjct: 900  FVAEDRSHPESEKIYAELDKLTHAMKMEGYVPDTRSVMHDVDEGEKENAVCHHSERLAIA 959

Query: 724  FGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDY 783
            +GLI+T PGT IRI KNLRVC DCHTATKFI+K+  R IV RD NRFHHFK GVCSCGDY
Sbjct: 960  YGLISTLPGTPIRIFKNLRVCPDCHTATKFITKIVDREIVARDVNRFHHFKDGVCSCGDY 1019

Query: 784  W 784
            W
Sbjct: 1020 W 1020



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 141/508 (27%), Positives = 248/508 (48%), Gaps = 15/508 (2%)

Query: 123 DRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKM--PEKDTVLWNSM 180
           D   G  +H H I      D +   AL+++Y +   ++ AR+V++K+   E+    WN+M
Sbjct: 156 DLVAGREVHEHIIQHCTVLDQYTVNALINMYIQCGSIEEARQVWNKLNHTERTVHSWNAM 215

Query: 181 ISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLG 240
           + G ++    ++++ +  +M ++G   L   +   +L +      L  G EI    +K  
Sbjct: 216 VVGYVQYGYIEEALKLLREMQQHGLA-LGRATTMRLLSSCKSPSALECGREIHVEAMKAR 274

Query: 241 FHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFR 300
               V V   +++ Y+KCG +  A  +F  +    ++S   +I GY   G +E +  +F+
Sbjct: 275 LLFDVNVANCILNMYAKCGSIHEAREVFDKMETKSVVSWTIIIGGYADCGHSEIAFEIFQ 334

Query: 301 QLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLN 360
           ++       N  T + ++  F     L     +HS  L +G  S+ +V TAL  +Y++  
Sbjct: 335 KMQQEGVVPNRITYINVLNAFSGPAALKWGKTVHSHILNAGHESDLAVGTALVKMYAKCG 394

Query: 361 EMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILS 420
             +  R++F++   + L +WN MI G  + G  EEA  ++ +MQ   + PN +T   +L+
Sbjct: 395 SYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGNWEEASEIYHQMQREGMMPNKITYVILLN 454

Query: 421 ACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVT 480
           AC    A+  G+ +H  V    F  +I V  ALI MYA+CG+I +AR LF+ M  K  ++
Sbjct: 455 ACVNPTALHWGREIHSRVVKDGFMFDISVQNALISMYARCGSIKDARLLFNKMVRKDIIS 514

Query: 481 WNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMI 540
           W  MI G    G G EAL +F +M  +G++P+ VT+ S+L ACS    +  G  I Q +I
Sbjct: 515 WTAMIGGLAKSGLGAEALAVFQDMQQAGLKPNRVTYTSILNACSSPAALDWGRRIHQQVI 574

Query: 541 HDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLA 600
            + G    A     +V++    G ++ A +    +  +     + A++G    H   NL 
Sbjct: 575 -EAGLATDAHVANTLVNMYSMCGSVKDARQVFDRM-TQRDIVAYNAMIGGYAAH---NLG 629

Query: 601 RVASEKLFE------LDPENVGYHVLLS 622
           + A  KLF+      L P+ V Y  +L+
Sbjct: 630 KEAL-KLFDRLQEEGLKPDKVTYINMLN 656



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 55/225 (24%), Positives = 104/225 (46%), Gaps = 9/225 (4%)

Query: 394 EEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTAL 453
           + A+ + Q +Q      N      +L  C ++  +  G+ VHE +       + Y   AL
Sbjct: 123 DRAMDVVQYLQQQGARVNSCDYMKMLKRCIEVKDLVAGREVHEHIIQHCTVLDQYTVNAL 182

Query: 454 IDMYAKCGNIVEARELFDLMSHKSEV--TWNTMISGYGLHGHGLEALQLFSEMLHSGIRP 511
           I+MY +CG+I EAR++++ ++H      +WN M+ GY  +G+  EAL+L  EM   G+  
Sbjct: 183 INMYIQCGSIEEARQVWNKLNHTERTVHSWNAMVVGYVQYGYIEEALKLLREMQQHGLAL 242

Query: 512 SGVTFLSVLYACSHAGLVREGDEI-FQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALE 570
              T + +L +C     +  G EI  ++M     F     +  C++++  + G + +A E
Sbjct: 243 GRATTMRLLSSCKSPSALECGREIHVEAMKARLLFDVNVAN--CILNMYAKCGSIHEARE 300

Query: 571 FIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENV 615
               +  +     W  ++G    + D   + +A E   ++  E V
Sbjct: 301 VFDKMETKS-VVSWTIIIGG---YADCGHSEIAFEIFQKMQQEGV 341


>gi|414867142|tpg|DAA45699.1| TPA: hypothetical protein ZEAMMB73_401104 [Zea mays]
          Length = 746

 Score =  545 bits (1403), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 295/721 (40%), Positives = 430/721 (59%), Gaps = 10/721 (1%)

Query: 70  PDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNT-ALTPDNFTYSFVLSAASACCDRSIGV 128
           P L L N +I  FS   +P+ ++     L      L PD+FT+  ++ AA      +   
Sbjct: 30  PPLLLVNSLIAAFSRAALPRLALPLLRRLLAGAHPLRPDSFTFPPLVRAAPGPASAA--- 86

Query: 129 LLHGHAIVSGY-GSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKN 187
            LH  A+  G    ++F   +LV  Y +F  V  A +VFD+MPE+D   WN+M+SGL +N
Sbjct: 87  QLHACALRLGLLHPNVFASGSLVHAYLRFGRVAEAYRVFDEMPERDVPAWNAMLSGLCRN 146

Query: 188 CCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYV 247
               D++ + G MV  G    D+ ++++VLP    + +  L + +    +K G    ++V
Sbjct: 147 TRAADAVTLLGRMVGEGVAG-DAVTLSSVLPMCVVLGDRALALVMHVYAVKHGLSGELFV 205

Query: 248 LTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAE 307
              L+  Y K G +  A  +F  +   DL++ N++IS     GK  +++ LF  ++ S  
Sbjct: 206 CNALIDVYGKLGMLTEAHWVFGGMALRDLVTWNSIISANEQGGKVAAAVELFHGMMESGV 265

Query: 308 RVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGI-VSNSSVLTALSTVYSRLNEMEAAR 366
             +  T+V L       G       +H +  + G  V +     A+  +Y+++++++AA+
Sbjct: 266 CPDVLTLVSLASAVAQCGDELGAKSVHCYVRRRGWDVGDIIAGNAMVDMYAKMSKIDAAQ 325

Query: 367 KLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASK-VAPNPVTVSSILSACAQL 425
           K+FD   ++ + SWN +I GY QNGL  EAI ++ +M   + + P   T  S+L A + L
Sbjct: 326 KVFDNLPDRDVVSWNTLITGYMQNGLANEAIRIYNDMHNHEGLKPIQGTFVSVLPAYSYL 385

Query: 426 GAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMI 485
           G +  G  +H L        ++YV+T LID+YAKCG +VEA  LF+ M  +S   WN +I
Sbjct: 386 GGLQQGMRMHALSIKTGLNLDVYVTTCLIDLYAKCGKLVEAMFLFEHMPRRSTGPWNAII 445

Query: 486 SGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGF 545
           +G G+HGHG +AL LFS+M    I+P  VTF+S+L ACSHAGLV +G   F  M   +G 
Sbjct: 446 AGLGVHGHGAKALSLFSQMQQEEIKPDHVTFVSLLAACSHAGLVDQGRSFFDLMQTVYGI 505

Query: 546 KPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASE 605
            P+A+HY CMVD+LGRAGQL++A EFI+ + ++P  AVWGALLGAC IH +  + +VAS+
Sbjct: 506 VPIAKHYTCMVDMLGRAGQLDEAFEFIQSMPIKPDSAVWGALLGACRIHGNVEMGKVASQ 565

Query: 606 KLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFT 665
            LFELDPENVGY+VL+SN+Y+    +     VR +V+++ L K PG + +EV G+  VF 
Sbjct: 566 NLFELDPENVGYYVLMSNMYAKIGKWDGVDAVRSLVRRQNLQKTPGWSSMEVKGSVSVFY 625

Query: 666 SGDQL--HPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIA 723
           SG Q   HPQ   I   L  L  KM+ AG+  +    L DVEE+EKE ++  HSE+LAIA
Sbjct: 626 SGTQTEPHPQHEEIQRGLHDLLAKMKSAGYVPDYSFVLQDVEEDEKEQILNNHSERLAIA 685

Query: 724 FGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDY 783
           FG+I T PGT + I KNLRVC DCH+ATK+ISK+T R I+VRDANRFHHFK G CSCGD+
Sbjct: 686 FGIINTPPGTPLHIYKNLRVCGDCHSATKYISKITEREIIVRDANRFHHFKDGHCSCGDF 745

Query: 784 W 784
           W
Sbjct: 746 W 746



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 38/125 (30%), Positives = 65/125 (52%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           A+ +F ++P  D+  +N +I G+  N +   +I  Y  +  +  L P   T+  VL A S
Sbjct: 324 AQKVFDNLPDRDVVSWNTLITGYMQNGLANEAIRIYNDMHNHEGLKPIQGTFVSVLPAYS 383

Query: 120 ACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNS 179
                  G+ +H  +I +G   D++V   L+DLY K   +  A  +F+ MP + T  WN+
Sbjct: 384 YLGGLQQGMRMHALSIKTGLNLDVYVTTCLIDLYAKCGKLVEAMFLFEHMPRRSTGPWNA 443

Query: 180 MISGL 184
           +I+GL
Sbjct: 444 IIAGL 448


>gi|413942600|gb|AFW75249.1| hypothetical protein ZEAMMB73_388642 [Zea mays]
          Length = 693

 Score =  545 bits (1403), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 281/677 (41%), Positives = 404/677 (59%), Gaps = 3/677 (0%)

Query: 110 TYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKM 169
           T++ +L   +A  D + G  +H      G  S+     AL ++YFK      AR+VFD+M
Sbjct: 18  TFTALLKLCAARADLATGRAVHAQLEARGLASESIASTALANMYFKCRRPADARRVFDRM 77

Query: 170 PEKDTVLWNSMISGLMKNCCFQDSIWVFGDMV-RNGGTWLDSTSVAAVLPAVAEVQELRL 228
           P +D V WN++++G  +N     ++     M    GG   DS ++ +VLPA A+ + L  
Sbjct: 78  PSRDRVAWNAVVAGYARNGLPSSAMEAVVRMQGEEGGERPDSVTLVSVLPACADARALHA 137

Query: 229 GMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTC 288
             E+    L+ G  + V V T ++  Y KCG VE A  +F  +   + +S NAMI GY  
Sbjct: 138 CREVHAFALRAGLDELVNVSTAVLDAYCKCGAVEAARAVFDCMPVRNSVSWNAMIDGYAD 197

Query: 289 NGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSV 348
           NG    ++ LF +++     V  ++++  +      G+L     +H   ++ G+ SN SV
Sbjct: 198 NGNATEAMALFWRMVQEGVDVTDASVLAALQACGELGYLDEVRRVHELLVRVGLSSNVSV 257

Query: 349 LTALSTVYSRLNEMEAARKLFDE-SSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASK 407
             AL T Y++    + A ++F+E  ++K+  SWNAMI G+TQN   E+A  LF  MQ   
Sbjct: 258 TNALITTYAKCKRADLAAQVFNELGNKKTRISWNAMILGFTQNECPEDAERLFARMQLEN 317

Query: 408 VAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEAR 467
           V P+  T+ S++ A A +      +W+H        + ++YV TALIDMY+KCG +  AR
Sbjct: 318 VRPDSFTLVSVIPAVADISDPLQARWIHGYSIRHQLDQDVYVLTALIDMYSKCGRVSIAR 377

Query: 468 ELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAG 527
            LFD    +  +TWN MI GYG HG G  A++LF EM  +G  P+  TFLSVL ACSHAG
Sbjct: 378 RLFDSARDRHVITWNAMIHGYGSHGFGQAAVELFEEMKGTGSLPNETTFLSVLAACSHAG 437

Query: 528 LVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGAL 587
           LV EG + F SM  D+G +P  EHY  MVD+LGRAG+L++A  FIK + +EPG +V+GA+
Sbjct: 438 LVDEGQKYFASMKKDYGLEPGMEHYGTMVDLLGRAGKLDEAWSFIKNMPIEPGISVYGAM 497

Query: 588 LGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLA 647
           LGAC +HK+  LA  +++ +FEL PE   YHVLL+NIY+    +   A VR  ++K+ L 
Sbjct: 498 LGACKLHKNVELAEESAQIIFELGPEEGVYHVLLANIYANASMWKDVARVRTAMEKKGLQ 557

Query: 648 KAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEE 707
           K PG ++I++    H F SG   H  +  IYA L KL  ++++ G+  +T  ++HDVE++
Sbjct: 558 KTPGWSIIQLKNEVHTFYSGSTNHQHAKDIYARLAKLIEEIKDMGYVPDT-DSIHDVEDD 616

Query: 708 EKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDA 767
            K  ++  HSEKLAIA+GLI T PGT I+I KNLRVC DCH ATK IS +TGR I++RD 
Sbjct: 617 VKAQLLNTHSEKLAIAYGLIRTAPGTTIQIKKNLRVCNDCHNATKLISLLTGREIIMRDI 676

Query: 768 NRFHHFKGGVCSCGDYW 784
            RFHHFK G CSCGDYW
Sbjct: 677 QRFHHFKDGKCSCGDYW 693



 Score =  105 bits (263), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 107/465 (23%), Positives = 201/465 (43%), Gaps = 61/465 (13%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           ARA+F  +P  +   +N +I G+++N     ++  +  + +       + T + VL+A  
Sbjct: 173 ARAVFDCMPVRNSVSWNAMIDGYADNGNATEAMALFWRMVQEGV----DVTDASVLAALQ 228

Query: 120 ACCDRSIGVL-----LHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDT 174
           AC +  +G L     +H   +  G  S++ V  AL+  Y K      A +VF+++  K T
Sbjct: 229 ACGE--LGYLDEVRRVHELLVRVGLSSNVSVTNALITTYAKCKRADLAAQVFNELGNKKT 286

Query: 175 -VLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQ 233
            + WN+MI G  +N C +D+  +F  M +      DS ++ +V+PAVA++ +      I 
Sbjct: 287 RISWNAMILGFTQNECPEDAERLFARM-QLENVRPDSFTLVSVIPAVADISDPLQARWIH 345

Query: 234 CLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTE 293
              ++      VYVLT L+  YSKCG V  A  LF       +I+ NAMI GY  +G  +
Sbjct: 346 GYSIRHQLDQDVYVLTALIDMYSKCGRVSIARRLFDSARDRHVITWNAMIHGYGSHGFGQ 405

Query: 294 SSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALS 353
           +++ LF ++  +    N +T + +           L  C H+  +  G            
Sbjct: 406 AAVELFEEMKGTGSLPNETTFLSV-----------LAACSHAGLVDEG-----------Q 443

Query: 354 TVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPV 413
             ++ + +        D   E  +  +  M+    + G  +EA S  + M    + P   
Sbjct: 444 KYFASMKK--------DYGLEPGMEHYGTMVDLLGRAGKLDEAWSFIKNM---PIEPGIS 492

Query: 414 TVSSILSACAQLGAISLGKWVHELVKSRNFE--------SNIYVSTALIDMYAKCGNIVE 465
              ++L AC     + L +   +++     E        +NIY + ++    A+    +E
Sbjct: 493 VYGAMLGACKLHKNVELAEESAQIIFELGPEEGVYHVLLANIYANASMWKDVARVRTAME 552

Query: 466 AREL-----FDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEML 505
            + L     + ++  K+EV  +T  SG   H H  +     ++++
Sbjct: 553 KKGLQKTPGWSIIQLKNEV--HTFYSGSTNHQHAKDIYARLAKLI 595



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 50/198 (25%), Positives = 96/198 (48%), Gaps = 3/198 (1%)

Query: 23  SQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSI-PKPDLFLFNVIIRG 81
            ++ + H  ++  G  +++S    L    +  K    A  +F  +  K     +N +I G
Sbjct: 237 DEVRRVHELLVRVGLSSNVSVTNALITTYAKCKRADLAAQVFNELGNKKTRISWNAMILG 296

Query: 82  FSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGS 141
           F+ NE P+ +   +  ++    + PD+FT   V+ A +   D      +HG++I      
Sbjct: 297 FTQNECPEDAERLFARMQLEN-VRPDSFTLVSVIPAVADISDPLQARWIHGYSIRHQLDQ 355

Query: 142 DLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMV 201
           D++V  AL+D+Y K   V  AR++FD   ++  + WN+MI G   +   Q ++ +F +M 
Sbjct: 356 DVYVLTALIDMYSKCGRVSIARRLFDSARDRHVITWNAMIHGYGSHGFGQAAVELFEEM- 414

Query: 202 RNGGTWLDSTSVAAVLPA 219
           +  G+  + T+  +VL A
Sbjct: 415 KGTGSLPNETTFLSVLAA 432


>gi|18418348|ref|NP_567948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|223635622|sp|O81767.2|PP348_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g33990; AltName: Full=Protein EMBRYO DEFECTIVE 2758
 gi|332660906|gb|AEE86306.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 823

 Score =  544 bits (1401), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 282/758 (37%), Positives = 443/758 (58%), Gaps = 10/758 (1%)

Query: 29  HAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNEMP 88
           HA++++     ++    KL +          AR  F  I   D++ +N++I G+      
Sbjct: 74  HARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNS 133

Query: 89  KSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAA 148
              I  ++    ++ LTPD  T+  VL A     D   G  +H  A+  G+  D++V A+
Sbjct: 134 SEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVID---GNKIHCLALKFGFMWDVYVAAS 190

Query: 149 LVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWL 208
           L+ LY ++  V +AR +FD+MP +D   WN+MISG  ++   ++++      + NG   +
Sbjct: 191 LIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEAL-----TLSNGLRAM 245

Query: 209 DSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLF 268
           DS +V ++L A  E  +   G+ I    +K G    ++V   L+  Y++ G +   + +F
Sbjct: 246 DSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVF 305

Query: 269 RDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLH 328
             +   DLIS N++I  Y  N +   ++ LF+++  S  + +  T++ L  +    G + 
Sbjct: 306 DRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIR 365

Query: 329 LTNCIHSFCLKSG-IVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGY 387
               +  F L+ G  + + ++  A+  +Y++L  +++AR +F+      + SWN +I+GY
Sbjct: 366 ACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGY 425

Query: 388 TQNGLTEEAISLFQEMQAS-KVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESN 446
            QNG   EAI ++  M+   ++A N  T  S+L AC+Q GA+  G  +H  +       +
Sbjct: 426 AQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLD 485

Query: 447 IYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLH 506
           ++V T+L DMY KCG + +A  LF  +   + V WNT+I+ +G HGHG +A+ LF EML 
Sbjct: 486 VFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLD 545

Query: 507 SGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLE 566
            G++P  +TF+++L ACSH+GLV EG   F+ M  D+G  P  +HY CMVD+ GRAGQLE
Sbjct: 546 EGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLE 605

Query: 567 KALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYS 626
            AL+FIK ++++P  ++WGALL AC +H + +L ++ASE LFE++PE+VGYHVLLSN+Y+
Sbjct: 606 TALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYA 665

Query: 627 AERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNG 686
           +   +     +R +   + L K PG + +EV     VF +G+Q HP    +Y  L  L  
Sbjct: 666 SAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALQA 725

Query: 687 KMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLD 746
           K++  G+  +    L DVE++EKE ++  HSE+LAIAF LIAT   T IRI KNLRVC D
Sbjct: 726 KLKMIGYVPDHRFVLQDVEDDEKEHILMSHSERLAIAFALIATPAKTTIRIFKNLRVCGD 785

Query: 747 CHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           CH+ TKFISK+T R I+VRD+NRFHHFK GVCSCGDYW
Sbjct: 786 CHSVTKFISKITEREIIVRDSNRFHHFKNGVCSCGDYW 823



 Score =  217 bits (553), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 158/507 (31%), Positives = 253/507 (49%), Gaps = 15/507 (2%)

Query: 121 CCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSM 180
           C +      LH   +VS    ++ + A LV+LY     V  AR  FD +  +D   WN M
Sbjct: 64  CTNLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLM 123

Query: 181 ISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLG 240
           ISG  +     + I  F   + + G   D  +  +VL A   V +   G +I CL LK G
Sbjct: 124 ISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVID---GNKIHCLALKFG 180

Query: 241 FHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFR 300
           F   VYV   L+  YS+   V  A +LF ++   D+ S NAMISGY  +G  + +L L  
Sbjct: 181 FMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSN 240

Query: 301 QLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLN 360
            L A    ++S T+V L+      G  +    IHS+ +K G+ S   V   L  +Y+   
Sbjct: 241 GLRA----MDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFG 296

Query: 361 EMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILS 420
            +   +K+FD    + L SWN++I  Y  N     AISLFQEM+ S++ P+ +T+ S+ S
Sbjct: 297 RLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLAS 356

Query: 421 ACAQLGAISLGKWVHELVKSRN-FESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEV 479
             +QLG I   + V      +  F  +I +  A++ MYAK G +  AR +F+ + +   +
Sbjct: 357 ILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVI 416

Query: 480 TWNTMISGYGLHGHGLEALQLFSEMLHSG-IRPSGVTFLSVLYACSHAGLVREGDEIFQS 538
           +WNT+ISGY  +G   EA+++++ M   G I  +  T++SVL ACS AG +R+G ++   
Sbjct: 417 SWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGR 476

Query: 539 MIHDHGFKPLAEHYACMVDILGRAGQLEKALE-FIKGLAVEPGPAVWGALLGACMIHKDT 597
           ++ + G          + D+ G+ G+LE AL  F +   V   P  W  L+     H   
Sbjct: 477 LLKN-GLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVP--WNTLIACHGFHGHG 533

Query: 598 NLARVASEKLFE--LDPENVGYHVLLS 622
             A +  +++ +  + P+++ +  LLS
Sbjct: 534 EKAVMLFKEMLDEGVKPDHITFVTLLS 560



 Score =  205 bits (522), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 156/549 (28%), Positives = 272/549 (49%), Gaps = 19/549 (3%)

Query: 5   TPQSRNLFLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALF 64
           TP  R  F S+LK  +T     + H   +  GF  D+     L H  S +KA   AR LF
Sbjct: 150 TPDYRT-FPSVLKACRTVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILF 208

Query: 65  FSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDR 124
             +P  D+  +N +I G+  +   K ++     LR       D+ T   +LSA +   D 
Sbjct: 209 DEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLR-----AMDSVTVVSLLSACTEAGDF 263

Query: 125 SIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGL 184
           + GV +H ++I  G  S+LFV   L+DLY +F  ++  +KVFD+M  +D + WNS+I   
Sbjct: 264 NRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAY 323

Query: 185 MKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLG-FHD 243
             N     +I +F +M R      D  ++ ++   ++++ ++R    +Q   L+ G F +
Sbjct: 324 ELNEQPLRAISLFQEM-RLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLE 382

Query: 244 HVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLL 303
            + +   +V  Y+K G V+ A  +F  +   D+IS N +ISGY  NG    ++ ++  + 
Sbjct: 383 DITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIME 442

Query: 304 ASAE-RVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEM 362
              E   N  T V ++P     G L     +H   LK+G+  +  V+T+L+ +Y +   +
Sbjct: 443 EEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRL 502

Query: 363 EAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSAC 422
           E A  LF +    +   WN +IA +  +G  E+A+ LF+EM    V P+ +T  ++LSAC
Sbjct: 503 EDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSAC 562

Query: 423 AQLGAISLGKWVHELVKSR-NFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVT- 480
           +  G +  G+W  E++++      ++     ++DMY + G +  A +    MS + + + 
Sbjct: 563 SHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASI 622

Query: 481 WNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTF---LSVLYACSHAGLVREGDEIFQ 537
           W  ++S   +HG+ ++  ++ SE L   + P  V +   LS +YA   AG     DEI +
Sbjct: 623 WGALLSACRVHGN-VDLGKIASEHLFE-VEPEHVGYHVLLSNMYA--SAGKWEGVDEI-R 677

Query: 538 SMIHDHGFK 546
           S+ H  G +
Sbjct: 678 SIAHGKGLR 686


>gi|54695180|dbj|BAD67155.1| PpPPR_98 [Physcomitrella patens]
          Length = 986

 Score =  541 bits (1395), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 288/782 (36%), Positives = 455/782 (58%), Gaps = 7/782 (0%)

Query: 6   PQSRNLFLSLLKG---AKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARA 62
           P  R  F+S+L     A+   +  + +  I+  G+  DL   T L +          A  
Sbjct: 209 PDKRT-FVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATK 267

Query: 63  LFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACC 122
           +F ++P  DL  +  +I G + +   K +   +  + +   + PD   +  +L A +   
Sbjct: 268 VFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEE-GVQPDKVAFVSLLRACNHPE 326

Query: 123 DRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMIS 182
               G  +H      G+ ++++VG A++ +Y K   ++ A +VFD +  ++ V W +MI+
Sbjct: 327 ALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIA 386

Query: 183 GLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFH 242
           G  ++    ++   F  M+ +G    +  +  ++L A +    L+ G +IQ   ++ G+ 
Sbjct: 387 GFAQHGRIDEAFLFFNKMIESG-IEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYG 445

Query: 243 DHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQL 302
               V T L+S Y+KCG ++ A  +F  I + ++++ NAMI+ Y  + + +++L  F+ L
Sbjct: 446 SDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQAL 505

Query: 303 LASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEM 362
           L    + NSST   ++ V      L L   +H   +K+G+ S+  V  AL +++    ++
Sbjct: 506 LKEGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAGLESDLHVSNALVSMFVNCGDL 565

Query: 363 EAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSAC 422
            +A+ LF++  ++ L SWN +IAG+ Q+G  + A   F+ MQ S + P+ +T + +L+AC
Sbjct: 566 MSAKNLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNAC 625

Query: 423 AQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWN 482
           A   A++ G+ +H L+    F+ ++ V T LI MY KCG+I +A ++F  +  K+  +W 
Sbjct: 626 ASPEALTEGRRLHALITEAAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKLPKKNVYSWT 685

Query: 483 TMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHD 542
           +MI+GY  HG G EAL+LF +M   G++P  +TF+  L AC+HAGL+ EG   FQSM  +
Sbjct: 686 SMIAGYAQHGRGKEALELFYQMQQEGVKPDWITFVGALSACAHAGLIEEGLHHFQSM-KE 744

Query: 543 HGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARV 602
              +P  EHY CMVD+ GRAG L +A+EFI  + VEP   VWGALLGAC +H +  LA  
Sbjct: 745 FNIEPRMEHYGCMVDLFGRAGLLNEAVEFIIKMQVEPDSRVWGALLGACQVHLNVELAEK 804

Query: 603 ASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPH 662
           A++K  ELDP + G  V+LSNIY+A   + + A +R+V+  R + K PG + IEV G  H
Sbjct: 805 AAQKKLELDPNDNGVFVILSNIYAAAGMWKEVAKMRKVMLDRGVVKKPGQSWIEVDGKVH 864

Query: 663 VFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAI 722
            F S D+ HPQ+  I+A LE+L+ +MR+ G+  +T   LHDVE+ EKE  +  HSE+LAI
Sbjct: 865 TFYSDDKTHPQTEEIHAELERLHMEMRQLGYVPDTRYVLHDVEDNEKEQALFYHSERLAI 924

Query: 723 AFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGD 782
            +GL+ T P T I I KNLRVC DCHTATKFISK+T R I+ RD+NRFHHFK GVCSCGD
Sbjct: 925 TYGLLKTPPLTPIVISKNLRVCGDCHTATKFISKITKRQIIARDSNRFHHFKDGVCSCGD 984

Query: 783 YW 784
           +W
Sbjct: 985 FW 986



 Score =  265 bits (676), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 161/611 (26%), Positives = 310/611 (50%), Gaps = 11/611 (1%)

Query: 7   QSRNLFLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFS 66
           Q+ +  L L    K      + +  I   G Q D+     L +  +    T  A+ +F  
Sbjct: 111 QTYSALLQLCIKFKNLGDGERIYNHIKKSGVQPDIFMRNTLINMYAKCGNTISAKQIFDD 170

Query: 67  IPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSI 126
           + + D++ +N+++ G+  + + + +   +  + +++ + PD  T+  +L+A +   +   
Sbjct: 171 MREKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDS-VKPDKRTFVSMLNACADARNVDK 229

Query: 127 GVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMK 186
           G  L+   + +G+ +DLFVG AL++++ K   +  A KVFD +P +D V W SMI+GL +
Sbjct: 230 GRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLAR 289

Query: 187 NCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVY 246
           +  F+ +  +F  M    G   D  +  ++L A    + L  G ++     ++G+   +Y
Sbjct: 290 HGRFKQACNLFQRM-EEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIY 348

Query: 247 VLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASA 306
           V T ++S Y+KCG +E A  +F  +   +++S  AMI+G+  +G+ + +   F +++ S 
Sbjct: 349 VGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESG 408

Query: 307 ERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAAR 366
              N  T + ++        L     I    +++G  S+  V TAL ++Y++   ++ A 
Sbjct: 409 IEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAH 468

Query: 367 KLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLG 426
           ++F++ S++++ +WNAMI  Y Q+   + A++ FQ +    + PN  T +SIL+ C    
Sbjct: 469 RVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSD 528

Query: 427 AISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMIS 486
           ++ LGKWVH L+     ES+++VS AL+ M+  CG+++ A+ LF+ M  +  V+WNT+I+
Sbjct: 529 SLELGKWVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMPKRDLVSWNTIIA 588

Query: 487 GYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFK 546
           G+  HG    A   F  M  SGI+P  +TF  +L AC+    + EG  +  ++I +  F 
Sbjct: 589 GFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNACASPEALTEGRRL-HALITEAAFD 647

Query: 547 PLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAV--WGALLGACMIHKDTNLARVAS 604
                   ++ +  + G +E A +    L   P   V  W +++     H      + A 
Sbjct: 648 CDVLVGTGLISMYTKCGSIEDAHQVFHKL---PKKNVYSWTSMIAGYAQH---GRGKEAL 701

Query: 605 EKLFELDPENV 615
           E  +++  E V
Sbjct: 702 ELFYQMQQEGV 712



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 100/361 (27%), Positives = 189/361 (52%), Gaps = 12/361 (3%)

Query: 266 LLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFG 325
           ++F DI   D    NA+++  +  G+   ++++  ++ +S  ++   T   L+ +   F 
Sbjct: 67  VVFADI--KDTQKANAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFK 124

Query: 326 HLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIA 385
           +L     I++   KSG+  +  +   L  +Y++     +A+++FD+  EK + SWN ++ 
Sbjct: 125 NLGDGERIYNHIKKSGVQPDIFMRNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLG 184

Query: 386 GYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFES 445
           GY Q+GL EEA  L ++M    V P+  T  S+L+ACA    +  G+ ++ L+    +++
Sbjct: 185 GYVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDT 244

Query: 446 NIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEML 505
           +++V TALI+M+ KCG+I +A ++FD +  +  VTW +MI+G   HG   +A  LF  M 
Sbjct: 245 DLFVGTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRME 304

Query: 506 HSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQL 565
             G++P  V F+S+L AC+H   + +G ++   M  + G+         ++ +  + G +
Sbjct: 305 EEGVQPDKVAFVSLLRACNHPEALEQGKKVHARM-KEVGWDTEIYVGTAILSMYTKCGSM 363

Query: 566 EKALE---FIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFE--LDPENVGYHVL 620
           E ALE    +KG  V      W A++     H   + A +   K+ E  ++P  V +  +
Sbjct: 364 EDALEVFDLVKGRNV----VSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSI 419

Query: 621 L 621
           L
Sbjct: 420 L 420


>gi|168056582|ref|XP_001780298.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162668246|gb|EDQ54857.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 986

 Score =  541 bits (1394), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 288/782 (36%), Positives = 455/782 (58%), Gaps = 7/782 (0%)

Query: 6   PQSRNLFLSLLKG---AKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARA 62
           P  R  F+S+L     A+   +  + +  I+  G+  DL   T L +          A  
Sbjct: 209 PDKRT-FVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATK 267

Query: 63  LFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACC 122
           +F ++P  DL  +  +I G + +   K +   +  + +   + PD   +  +L A +   
Sbjct: 268 VFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEE-GVQPDKVAFVSLLRACNHPE 326

Query: 123 DRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMIS 182
               G  +H      G+ ++++VG A++ +Y K   ++ A +VFD +  ++ V W +MI+
Sbjct: 327 ALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIA 386

Query: 183 GLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFH 242
           G  ++    ++   F  M+ +G    +  +  ++L A +    L+ G +IQ   ++ G+ 
Sbjct: 387 GFAQHGRIDEAFLFFNKMIESG-IEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYG 445

Query: 243 DHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQL 302
               V T L+S Y+KCG ++ A  +F  I + ++++ NAMI+ Y  + + +++L  F+ L
Sbjct: 446 SDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQAL 505

Query: 303 LASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEM 362
           L    + NSST   ++ V      L L   +H   +K+G+ S+  V  AL +++    ++
Sbjct: 506 LKEGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAGLESDLHVSNALVSMFVNCGDL 565

Query: 363 EAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSAC 422
            +A+ LF++  ++ L SWN +IAG+ Q+G  + A   F+ MQ S + P+ +T + +L+AC
Sbjct: 566 MSAKNLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNAC 625

Query: 423 AQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWN 482
           A   A++ G+ +H L+    F+ ++ V T LI MY KCG+I +A ++F  +  K+  +W 
Sbjct: 626 ASPEALTEGRRLHALITEAAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKLPKKNVYSWT 685

Query: 483 TMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHD 542
           +MI+GY  HG G EAL+LF +M   G++P  +TF+  L AC+HAGL+ EG   FQSM  +
Sbjct: 686 SMITGYAQHGRGKEALELFYQMQQEGVKPDWITFVGALSACAHAGLIEEGLHHFQSM-KE 744

Query: 543 HGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARV 602
              +P  EHY CMVD+ GRAG L +A+EFI  + VEP   VWGALLGAC +H +  LA  
Sbjct: 745 FNIEPRMEHYGCMVDLFGRAGLLNEAVEFIIKMQVEPDSRVWGALLGACQVHLNVELAEK 804

Query: 603 ASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPH 662
           A++K  ELDP + G  V+LSNIY+A   + + A +R+V+  R + K PG + IEV G  H
Sbjct: 805 AAQKKLELDPNDNGVFVILSNIYAAAGMWKEVAKMRKVMLDRGVVKKPGQSWIEVDGKVH 864

Query: 663 VFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAI 722
            F S D+ HPQ+  I+A LE+L+ +MR+ G+  +T   LHDVE+ EKE  +  HSE+LAI
Sbjct: 865 TFYSDDKTHPQTEEIHAELERLHMEMRQLGYVPDTRYVLHDVEDNEKEQALFYHSERLAI 924

Query: 723 AFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGD 782
            +GL+ T P T I I KNLRVC DCHTATKFISK+T R I+ RD+NRFHHFK GVCSCGD
Sbjct: 925 TYGLLKTPPLTPIVISKNLRVCGDCHTATKFISKITKRQIIARDSNRFHHFKDGVCSCGD 984

Query: 783 YW 784
           +W
Sbjct: 985 FW 986



 Score =  263 bits (673), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 142/497 (28%), Positives = 270/497 (54%), Gaps = 2/497 (0%)

Query: 36  GFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFY 95
           G Q D+     L +  +    T  A+ +F  + + D++ +N+++ G+  + + + +   +
Sbjct: 140 GVQPDIFMWNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKLH 199

Query: 96  THLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFK 155
             + +++ + PD  T+  +L+A +   +   G  L+   + +G+ +DLFVG AL++++ K
Sbjct: 200 EQMVQDS-VKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIK 258

Query: 156 FSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAA 215
              +  A KVFD +P +D V W SMI+GL ++  F+ +  +F  M    G   D  +  +
Sbjct: 259 CGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRM-EEEGVQPDKVAFVS 317

Query: 216 VLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPD 275
           +L A    + L  G ++     ++G+   +YV T ++S Y+KCG +E A  +F  +   +
Sbjct: 318 LLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRN 377

Query: 276 LISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHS 335
           ++S  AMI+G+  +G+ + +   F +++ S    N  T + ++        L     I  
Sbjct: 378 VVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQD 437

Query: 336 FCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEE 395
             +++G  S+  V TAL ++Y++   ++ A ++F++ S++++ +WNAMI  Y Q+   + 
Sbjct: 438 HIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDN 497

Query: 396 AISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALID 455
           A++ FQ +    + PN  T +SIL+ C    ++ LGKWVH L+     ES+++VS AL+ 
Sbjct: 498 ALATFQALLKEGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAGLESDLHVSNALVS 557

Query: 456 MYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVT 515
           M+  CG+++ A+ LF+ M  +  V+WNT+I+G+  HG    A   F  M  SGI+P  +T
Sbjct: 558 MFVNCGDLMSAKNLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKIT 617

Query: 516 FLSVLYACSHAGLVREG 532
           F  +L AC+    + EG
Sbjct: 618 FTGLLNACASPEALTEG 634



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 124/414 (29%), Positives = 221/414 (53%), Gaps = 1/414 (0%)

Query: 110 TYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKM 169
           TYS +L       +   G  ++ H   SG   D+F+   L+++Y K     SA+++FD M
Sbjct: 112 TYSALLQLCIKFKNLGDGERIYNHIKKSGVQPDIFMWNTLINMYAKCGNTISAKQIFDDM 171

Query: 170 PEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLG 229
            EKD   WN ++ G +++  ++++  +   MV++     D  +  ++L A A+ + +  G
Sbjct: 172 REKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQD-SVKPDKRTFVSMLNACADARNVDKG 230

Query: 230 MEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCN 289
            E+  L LK G+   ++V T L++ + KCG++  A  +F ++   DL++  +MI+G   +
Sbjct: 231 RELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARH 290

Query: 290 GKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVL 349
           G+ + +  LF+++     + +    V L+        L     +H+   + G  +   V 
Sbjct: 291 GRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVG 350

Query: 350 TALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVA 409
           TA+ ++Y++   ME A ++FD    +++ SW AMIAG+ Q+G  +EA   F +M  S + 
Sbjct: 351 TAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIE 410

Query: 410 PNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEAREL 469
           PN VT  SIL AC+   A+  G+ + + +    + S+  V TAL+ MYAKCG++ +A  +
Sbjct: 411 PNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRV 470

Query: 470 FDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYAC 523
           F+ +S ++ V WN MI+ Y  H     AL  F  +L  GI+P+  TF S+L  C
Sbjct: 471 FEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVC 524



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 100/361 (27%), Positives = 189/361 (52%), Gaps = 12/361 (3%)

Query: 266 LLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFG 325
           ++F DI   D    NA+++  +  G+   ++++  ++ +S  ++   T   L+ +   F 
Sbjct: 67  VVFADI--KDTQKANAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFK 124

Query: 326 HLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIA 385
           +L     I++   KSG+  +  +   L  +Y++     +A+++FD+  EK + SWN ++ 
Sbjct: 125 NLGDGERIYNHIKKSGVQPDIFMWNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLG 184

Query: 386 GYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFES 445
           GY Q+GL EEA  L ++M    V P+  T  S+L+ACA    +  G+ ++ L+    +++
Sbjct: 185 GYVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDT 244

Query: 446 NIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEML 505
           +++V TALI+M+ KCG+I +A ++FD +  +  VTW +MI+G   HG   +A  LF  M 
Sbjct: 245 DLFVGTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRME 304

Query: 506 HSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQL 565
             G++P  V F+S+L AC+H   + +G ++   M  + G+         ++ +  + G +
Sbjct: 305 EEGVQPDKVAFVSLLRACNHPEALEQGKKVHARM-KEVGWDTEIYVGTAILSMYTKCGSM 363

Query: 566 EKALE---FIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFE--LDPENVGYHVL 620
           E ALE    +KG  V      W A++     H   + A +   K+ E  ++P  V +  +
Sbjct: 364 EDALEVFDLVKGRNV----VSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSI 419

Query: 621 L 621
           L
Sbjct: 420 L 420


>gi|225436683|ref|XP_002262885.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Vitis vinifera]
          Length = 866

 Score =  541 bits (1393), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 297/763 (38%), Positives = 441/763 (57%), Gaps = 14/763 (1%)

Query: 27  QTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNE 86
           Q H Q I  GF  D+S  T L       ++      +F  +   ++  +  ++ G+  N 
Sbjct: 113 QVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSLLAGYRQNG 172

Query: 87  MPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVG 146
           + + ++  ++ ++    + P+ FT++ VL   +A      GV +H   I SG  S +FVG
Sbjct: 173 LNEQALKLFSQMQLE-GIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGLDSTIFVG 231

Query: 147 AALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGT 206
            ++V++Y K   V  A+ VFD M  ++ V WNSMI+G + N    ++  +F  M R  G 
Sbjct: 232 NSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYRM-RLEGV 290

Query: 207 WLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAEL 266
            L  T  A V+   A ++E+    ++ C  +K G    + + T L+  YSKC E++ A  
Sbjct: 291 KLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSEIDDAFK 350

Query: 267 LFRDI-VRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNS---STIVGLIPVFY 322
           LF  +    +++S  A+ISGY  NG+T+ ++ LF Q+     R N    STI+       
Sbjct: 351 LFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREGVRPNHFTYSTILTANAAVS 410

Query: 323 PFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNA 382
           P       + IH+  +K+   ++ SV TALS  YS++ +   A K+F+   EK + +W+A
Sbjct: 411 P-------SQIHALVVKTNYENSPSVGTALSDSYSKIGDANEAAKIFELIDEKDIVAWSA 463

Query: 383 MIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQ-LGAISLGKWVHELVKSR 441
           M++GY Q G  E A+ +F ++    V PN  T SS+L+ACA    ++  GK  H      
Sbjct: 464 MLSGYAQMGDIEGAVKIFLQLAKEGVEPNEFTFSSVLNACAAPTASVEQGKQFHSCSIKS 523

Query: 442 NFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLF 501
            F + + VS+AL+ MYAK GNI  A E+F     +  V+WN+MISGY  HG G ++L++F
Sbjct: 524 GFSNALCVSSALVTMYAKRGNIESANEVFKRQVDRDLVSWNSMISGYAQHGCGKKSLKIF 583

Query: 502 SEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGR 561
            EM    +   G+TF+ V+ AC+HAGLV EG   F  M+ D+   P  EHY+CMVD+  R
Sbjct: 584 EEMRSKNLELDGITFIGVISACTHAGLVNEGQRYFDLMVKDYHIVPTMEHYSCMVDLYSR 643

Query: 562 AGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLL 621
           AG LEKA++ I  +    G  +W  LL AC +H +  L  +A+EKL  L P++   +VLL
Sbjct: 644 AGMLEKAMDLINKMPFPAGATIWRTLLAACRVHLNVQLGELAAEKLISLQPQDSAAYVLL 703

Query: 622 SNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAML 681
           SNIY+   ++ + A VR+++  +K+ K  G + IEV      F +GD  HPQS  IY  L
Sbjct: 704 SNIYATAGNWQERAKVRKLMDMKKVKKEAGYSWIEVKNKTFSFMAGDLSHPQSDRIYLKL 763

Query: 682 EKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNL 741
           E+L+ ++++AG+  +T   LHDVEEE KE+++  HSE+LAIAFGLIAT PGT I+I+KNL
Sbjct: 764 EELSIRLKDAGYYPDTKYVLHDVEEEHKEVILSQHSERLAIAFGLIATPPGTPIQIVKNL 823

Query: 742 RVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           RVC DCHT  K ISK+ GR IVVRD+NRFHHFKGG CSCGDYW
Sbjct: 824 RVCGDCHTVIKLISKIEGRDIVVRDSNRFHHFKGGSCSCGDYW 866



 Score =  232 bits (592), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 158/537 (29%), Positives = 275/537 (51%), Gaps = 8/537 (1%)

Query: 59  YARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAA 118
           +++ LF   P+  L   N ++  FS N+  K ++  +  LR++ + T D  + S VL   
Sbjct: 44  HSQQLFDETPQQGLSRNNHLLFEFSRNDQNKEALNLFLGLRRSGSPT-DGSSLSCVLKVC 102

Query: 119 SACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWN 178
               DR +G  +H   I  G+  D+ VG +LVD+Y K   V+   +VFD+M  K+ V W 
Sbjct: 103 GCLFDRIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWT 162

Query: 179 SMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLK 238
           S+++G  +N   + ++ +F  M +  G   +  + AAVL  +A    +  G+++  + +K
Sbjct: 163 SLLAGYRQNGLNEQALKLFSQM-QLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIK 221

Query: 239 LGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRL 298
            G    ++V   +V+ YSK   V  A+ +F  +   + +S N+MI+G+  NG    +  L
Sbjct: 222 SGLDSTIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFEL 281

Query: 299 FRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSR 358
           F ++     ++  +    +I +      +     +H   +K+G   + ++ TAL   YS+
Sbjct: 282 FYRMRLEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSK 341

Query: 359 LNEMEAARKLF-DESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSS 417
            +E++ A KLF      +++ SW A+I+GY QNG T+ A++LF +M+   V PN  T S+
Sbjct: 342 CSEIDDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREGVRPNHFTYST 401

Query: 418 ILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKS 477
           IL+A A   A+S  + +H LV   N+E++  V TAL D Y+K G+  EA ++F+L+  K 
Sbjct: 402 ILTANA---AVSPSQ-IHALVVKTNYENSPSVGTALSDSYSKIGDANEAAKIFELIDEKD 457

Query: 478 EVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQ 537
            V W+ M+SGY   G    A+++F ++   G+ P+  TF SVL AC+      E  + F 
Sbjct: 458 IVAWSAMLSGYAQMGDIEGAVKIFLQLAKEGVEPNEFTFSSVLNACAAPTASVEQGKQFH 517

Query: 538 SMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIH 594
           S     GF       + +V +  + G +E A E  K   V+     W +++     H
Sbjct: 518 SCSIKSGFSNALCVSSALVTMYAKRGNIESANEVFK-RQVDRDLVSWNSMISGYAQH 573



 Score =  129 bits (323), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 121/486 (24%), Positives = 219/486 (45%), Gaps = 54/486 (11%)

Query: 8   SRNLFLSLLK---GAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALF 64
           ++ +F +++K     K  S   Q H Q+I +G   DL+  T L    S       A  LF
Sbjct: 293 TQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSEIDDAFKLF 352

Query: 65  FSIPK-PDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCD 123
             +    ++  +  II G+  N     ++  +  +R+   + P++FTYS +L+A +A   
Sbjct: 353 CMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRRE-GVRPNHFTYSTILTANAAVSP 411

Query: 124 RSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISG 183
             I    H   + + Y +   VG AL D Y K      A K+F+ + EKD V W++M+SG
Sbjct: 412 SQI----HALVVKTNYENSPSVGTALSDSYSKIGDANEAAKIFELIDEKDIVAWSAMLSG 467

Query: 184 LMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHD 243
             +    + ++ +F  + + G    + T  + +    A    +  G +     +K GF +
Sbjct: 468 YAQMGDIEGAVKIFLQLAKEGVEPNEFTFSSVLNACAAPTASVEQGKQFHSCSIKSGFSN 527

Query: 244 HVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLL 303
            + V + LV+ Y+K G +E A  +F+  V  DL+S N+MISGY  +G  + SL++F ++ 
Sbjct: 528 ALCVSSALVTMYAKRGNIESANEVFKRQVDRDLVSWNSMISGYAQHGCGKKSLKIFEEMR 587

Query: 304 ASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEME 363
           +    ++  T +G+I                S C  +G+V+       L           
Sbjct: 588 SKNLELDGITFIGVI----------------SACTHAGLVNEGQRYFDL----------- 620

Query: 364 AARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVS---SILS 420
               + D     ++  ++ M+  Y++ G+ E+A+ L  +M      P P   +   ++L+
Sbjct: 621 ---MVKDYHIVPTMEHYSCMVDLYSRAGMLEKAMDLINKM------PFPAGATIWRTLLA 671

Query: 421 ACAQLGAISLGKWVHE-LVKSRNFESNIYVSTALIDMYAKCGNIVE---ARELFDLMSHK 476
           AC     + LG+   E L+  +  +S  YV   L ++YA  GN  E    R+L D+   K
Sbjct: 672 ACRVHLNVQLGELAAEKLISLQPQDSAAYV--LLSNIYATAGNWQERAKVRKLMDMKKVK 729

Query: 477 SEVTWN 482
            E  ++
Sbjct: 730 KEAGYS 735



 Score = 99.8 bits (247), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 73/294 (24%), Positives = 145/294 (49%), Gaps = 14/294 (4%)

Query: 365 ARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQ 424
           +++LFDE+ ++ L+  N ++  +++N   +EA++LF  ++ S    +  ++S +L  C  
Sbjct: 45  SQQLFDETPQQGLSRNNHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCGC 104

Query: 425 LGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTM 484
           L    +GK VH       F  ++ V T+L+DMY K  ++ +   +FD M  K+ V+W ++
Sbjct: 105 LFDRIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSL 164

Query: 485 ISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHG 544
           ++GY  +G   +AL+LFS+M   GI+P+  TF +VL   +  G V +G ++  +M+   G
Sbjct: 165 LAGYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQV-HTMVIKSG 223

Query: 545 FKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVAS 604
                     MV++            + K L V    AV+ ++     +  ++ +A   +
Sbjct: 224 LDSTIFVGNSMVNM------------YSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVT 271

Query: 605 EKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVG 658
             L +L+   + Y + L  +   +  +     +   +K+   AK   C +I+ G
Sbjct: 272 NGL-DLEAFELFYRMRLEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNG 324


>gi|357111956|ref|XP_003557776.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Brachypodium distachyon]
          Length = 747

 Score =  541 bits (1393), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 290/715 (40%), Positives = 422/715 (59%), Gaps = 10/715 (1%)

Query: 76  NVIIRGFSNNEMPKSSICFYTH-LRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHA 134
           N +I  FS   +P+ +     H L       PD FT+  ++ AA +    +    LH  A
Sbjct: 37  NTLIAAFSRAALPRLAFPLLRHILSCAYPFRPDGFTFPSLIRAAPS---NASAAQLHACA 93

Query: 135 IVSGY-GSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDS 193
           +  G     +F   +LV  Y +F  +  A KVFD+M E+D   WN+M+SGL +N    ++
Sbjct: 94  LRLGLVRPSVFTSGSLVHAYLRFGRISEAYKVFDEMSERDVPAWNAMLSGLCRNARAAEA 153

Query: 194 IWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVS 253
           + +FG MV  G    D+ +V++VLP    + +  L + +    +K G    ++V   L+ 
Sbjct: 154 VGLFGRMVGEGVAG-DTVTVSSVLPMCVLLGDQVLALVMHVYAVKHGLDKELFVCNALID 212

Query: 254 FYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSST 313
            Y K G +E A+ +F  +   DL++ N++ISG    G+T ++L++F+ +  S    +  T
Sbjct: 213 VYGKLGMLEEAQCVFHGMECRDLVTWNSIISGCEQRGQTAAALKMFQGMRGSGVSPDVLT 272

Query: 314 IVGLIPVFYPFGHLHLTNCIHSFCLKSGI-VSNSSVLTALSTVYSRLNEMEAARKLFDES 372
           +V L       G       +H + ++ G  V +     A+  +Y++L+ +EAA+++FD  
Sbjct: 273 LVSLASAIAQGGDGRSAKSLHCYVMRRGWDVDDIIAGNAIVDMYAKLSNIEAAQRMFDSM 332

Query: 373 SEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASK-VAPNPVTVSSILSACAQLGAISLG 431
             +   SWN +I GY QNGL  EA+  +  MQ  + +     T  S+L A + LGA+  G
Sbjct: 333 PVQDSVSWNTLITGYMQNGLANEAVERYGHMQKHEGLKAIQGTFVSVLPAYSHLGALQQG 392

Query: 432 KWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLH 491
             +H L        ++YV T LID+YAKCG + EA  LF+ M  +S   WN +ISG G+H
Sbjct: 393 MRMHALSIKIGLNVDVYVGTCLIDLYAKCGKLAEAMLLFEKMPRRSTGPWNAIISGLGVH 452

Query: 492 GHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEH 551
           GHG EAL LFS M   GI+P  VTF+S+L ACSHAGLV +G   F  M   +   P+A+H
Sbjct: 453 GHGAEALTLFSRMQQEGIKPDHVTFVSLLAACSHAGLVDQGRSFFDVMQVTYDIVPIAKH 512

Query: 552 YACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELD 611
           YACM D+LGRAGQL++A  FI+ + ++P  AVWGALLGAC IH +  + +VAS+ LFELD
Sbjct: 513 YACMADMLGRAGQLDEAFNFIQNMPIKPDSAVWGALLGACRIHGNVEMGKVASQNLFELD 572

Query: 612 PENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQL- 670
           PENVGY+VL+SN+Y+    +     VR +V+++ L K PG + IEV  + +VF SG+Q  
Sbjct: 573 PENVGYYVLMSNMYAKVGKWDGVDEVRSLVRRQNLQKTPGWSSIEVKRSVNVFYSGNQTE 632

Query: 671 -HPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIAT 729
            HPQ   I A L  L  K+R  G+ ++    L DVE++EKE ++  HSE+LAIAFG+I T
Sbjct: 633 PHPQHEEIQAELRSLLAKIRSVGYVSDYSFVLQDVEDDEKEHILNNHSERLAIAFGIINT 692

Query: 730 EPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
              T + I KNLRVC DCH ATK+IS++T R I+VRD+NRFHHFK G CSCGD+W
Sbjct: 693 PSRTPLHIYKNLRVCGDCHNATKYISQITEREIIVRDSNRFHHFKDGHCSCGDFW 747



 Score = 79.3 bits (194), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 48/163 (29%), Positives = 85/163 (52%), Gaps = 3/163 (1%)

Query: 42  STVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKN 101
           + +  +  +LS+ +A   A+ +F S+P  D   +N +I G+  N +   ++  Y H++K+
Sbjct: 310 NAIVDMYAKLSNIEA---AQRMFDSMPVQDSVSWNTLITGYMQNGLANEAVERYGHMQKH 366

Query: 102 TALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKS 161
             L     T+  VL A S       G+ +H  +I  G   D++VG  L+DLY K   +  
Sbjct: 367 EGLKAIQGTFVSVLPAYSHLGALQQGMRMHALSIKIGLNVDVYVGTCLIDLYAKCGKLAE 426

Query: 162 ARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNG 204
           A  +F+KMP + T  WN++ISGL  +    +++ +F  M + G
Sbjct: 427 AMLLFEKMPRRSTGPWNAIISGLGVHGHGAEALTLFSRMQQEG 469


>gi|115465982|ref|NP_001056590.1| Os06g0112000 [Oryza sativa Japonica Group]
 gi|7363286|dbj|BAA93030.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|113594630|dbj|BAF18504.1| Os06g0112000 [Oryza sativa Japonica Group]
 gi|215737111|dbj|BAG96040.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 734

 Score =  540 bits (1392), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 280/675 (41%), Positives = 404/675 (59%), Gaps = 1/675 (0%)

Query: 110 TYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKM 169
           T++ +L   +A  D + G  +H      G  S+     AL ++Y K      AR+VFD+M
Sbjct: 61  TFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALANMYAKCRRPADARRVFDRM 120

Query: 170 PEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLG 229
           P +D V WN++++G  +N   + ++ +   M    G   DS ++ +VLPA A  + L   
Sbjct: 121 PVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSITLVSVLPACANARALAAC 180

Query: 230 MEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCN 289
            E     ++ G  + V V T ++  Y KCG++  A ++F  +   + +S NAMI GY  N
Sbjct: 181 REAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQN 240

Query: 290 GKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVL 349
           G +  +L LF +++     V   +++  +      G L     +H   ++ G+ SN SV+
Sbjct: 241 GDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGMRVHELLVRIGLDSNVSVM 300

Query: 350 TALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVA 409
            AL T+YS+   ++ A  +FDE   ++  SWNAMI G  QNG +E+A+ LF  MQ   V 
Sbjct: 301 NALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNGCSEDAVRLFTRMQLENVK 360

Query: 410 PNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEAREL 469
           P+  T+ S++ A A +      +W+H      + + ++YV TALIDMYAKCG +  AR L
Sbjct: 361 PDSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVNIARIL 420

Query: 470 FDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLV 529
           F+    +  +TWN MI GYG HG G  A++LF EM   GI P+  TFLSVL ACSHAGLV
Sbjct: 421 FNSARERHVITWNAMIHGYGSHGFGKAAVELFEEMKSIGIVPNETTFLSVLSACSHAGLV 480

Query: 530 REGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLG 589
            EG E F SM  D+G +P  EHY  MVD+LGRAG+L++A  FI+ + ++PG +V+GA+LG
Sbjct: 481 DEGREYFTSMKEDYGLEPGMEHYGTMVDLLGRAGKLDEAWAFIQKMPMDPGLSVYGAMLG 540

Query: 590 ACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKA 649
           AC +HK+  LA  +++K+FEL P+   YHVLL+NIY+    +   A VR  ++K  L K 
Sbjct: 541 ACKLHKNVELAEESAQKIFELGPQEGVYHVLLANIYANASMWKDVARVRTAMEKNGLQKT 600

Query: 650 PGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEK 709
           PG ++I++    H F SG   H Q+  IY+ L KL  +++  G+  +T  ++HDVE++ K
Sbjct: 601 PGWSIIQLKNEIHTFYSGSTNHQQAKEIYSRLAKLIEEIKAVGYVPDT-DSIHDVEDDVK 659

Query: 710 ELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANR 769
             ++  HSEKLAIAFGLI T PGT I+I KNLRVC DCH ATK IS VTGR I++RD  R
Sbjct: 660 AQLLNTHSEKLAIAFGLIRTAPGTTIQIKKNLRVCNDCHNATKLISLVTGREIIMRDIQR 719

Query: 770 FHHFKGGVCSCGDYW 784
           FHHFK G CSCGDYW
Sbjct: 720 FHHFKDGKCSCGDYW 734



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 43/126 (34%), Positives = 69/126 (54%), Gaps = 1/126 (0%)

Query: 396 AISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALID 455
           A++ F  M ++   P   T +S+L  CA  G ++ G+ VH  + +R  +S    +TAL +
Sbjct: 43  ALAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALAN 102

Query: 456 MYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEML-HSGIRPSGV 514
           MYAKC    +AR +FD M  +  V WN +++GY  +G    A+++   M    G RP  +
Sbjct: 103 MYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSI 162

Query: 515 TFLSVL 520
           T +SVL
Sbjct: 163 TLVSVL 168



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 57/243 (23%), Positives = 110/243 (45%), Gaps = 11/243 (4%)

Query: 27  QTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNE 86
           + H  ++  G  +++S +  L    S  K    A  +F  + +     +N +I G + N 
Sbjct: 283 RVHELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNG 342

Query: 87  MPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVG 146
             + ++  +T ++    + PD+FT   V+ A +   D      +HG++I      D++V 
Sbjct: 343 CSEDAVRLFTRMQLEN-VKPDSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQDVYVL 401

Query: 147 AALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDM-----V 201
            AL+D+Y K   V  AR +F+   E+  + WN+MI G   +   + ++ +F +M     V
Sbjct: 402 TALIDMYAKCGRVNIARILFNSARERHVITWNAMIHGYGSHGFGKAAVELFEEMKSIGIV 461

Query: 202 RNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEV 261
            N  T+L   S  +    V E +E    M+ +  GL+ G   +      +V    + G++
Sbjct: 462 PNETTFLSVLSACSHAGLVDEGREYFTSMK-EDYGLEPGMEHY----GTMVDLLGRAGKL 516

Query: 262 ERA 264
           + A
Sbjct: 517 DEA 519


>gi|125595802|gb|EAZ35582.1| hypothetical protein OsJ_19868 [Oryza sativa Japonica Group]
          Length = 734

 Score =  540 bits (1392), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 280/675 (41%), Positives = 404/675 (59%), Gaps = 1/675 (0%)

Query: 110 TYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKM 169
           T++ +L   +A  D + G  +H      G  S+     AL ++Y K      AR+VFD+M
Sbjct: 61  TFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALANMYAKCRRPADARRVFDRM 120

Query: 170 PEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLG 229
           P +D V WN++++G  +N   + ++ +   M    G   DS ++ +VLPA A  + L   
Sbjct: 121 PVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSITLVSVLPACANARALAAC 180

Query: 230 MEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCN 289
            E     ++ G  + V V T ++  Y KCG++  A ++F  +   + +S NAMI GY  N
Sbjct: 181 REAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQN 240

Query: 290 GKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVL 349
           G +  +L LF +++     V   +++  +      G L     +H   ++ G+ SN SV+
Sbjct: 241 GDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGMRVHELLVRIGLDSNVSVM 300

Query: 350 TALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVA 409
            AL T+YS+   ++ A  +FDE   ++  SWNAMI G  QNG +E+A+ LF  MQ   V 
Sbjct: 301 NALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNGCSEDAVRLFTRMQLENVK 360

Query: 410 PNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEAREL 469
           P+  T+ S++ A A +      +W+H      + + ++YV TALIDMYAKCG +  AR L
Sbjct: 361 PDSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVNIARIL 420

Query: 470 FDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLV 529
           F+    +  +TWN MI GYG HG G  A++LF EM   GI P+  TFLSVL ACSHAGLV
Sbjct: 421 FNSARERHVITWNAMIHGYGSHGFGKAAVELFEEMKSIGIVPNETTFLSVLSACSHAGLV 480

Query: 530 REGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLG 589
            EG E F SM  D+G +P  EHY  MVD+LGRAG+L++A  FI+ + ++PG +V+GA+LG
Sbjct: 481 DEGREYFTSMKEDYGLEPGMEHYGTMVDLLGRAGKLDEAWAFIQKMPMDPGLSVYGAMLG 540

Query: 590 ACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKA 649
           AC +HK+  LA  +++K+FEL P+   YHVLL+NIY+    +   A VR  ++K  L K 
Sbjct: 541 ACKLHKNVELAEESAQKIFELGPQEGVYHVLLANIYANASMWKDVARVRTAMEKNGLQKT 600

Query: 650 PGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEK 709
           PG ++I++    H F SG   H Q+  IY+ L KL  +++  G+  +T  ++HDVE++ K
Sbjct: 601 PGWSIIQLKNEIHTFYSGSTNHQQAKEIYSRLAKLIEEIKAVGYVPDT-DSIHDVEDDVK 659

Query: 710 ELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANR 769
             ++  HSEKLAIAFGLI T PGT I+I KNLRVC DCH ATK IS VTGR I++RD  R
Sbjct: 660 AQLLNTHSEKLAIAFGLIRTAPGTTIQIKKNLRVCNDCHNATKLISLVTGREIIMRDIQR 719

Query: 770 FHHFKGGVCSCGDYW 784
           FHHFK G CSCGDYW
Sbjct: 720 FHHFKDGKCSCGDYW 734



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 43/126 (34%), Positives = 69/126 (54%), Gaps = 1/126 (0%)

Query: 396 AISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALID 455
           A++ F  M ++   P   T +S+L  CA  G ++ G+ VH  + +R  +S    +TAL +
Sbjct: 43  ALAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALAN 102

Query: 456 MYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEML-HSGIRPSGV 514
           MYAKC    +AR +FD M  +  V WN +++GY  +G    A+++   M    G RP  +
Sbjct: 103 MYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSI 162

Query: 515 TFLSVL 520
           T +SVL
Sbjct: 163 TLVSVL 168



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 57/243 (23%), Positives = 110/243 (45%), Gaps = 11/243 (4%)

Query: 27  QTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNE 86
           + H  ++  G  +++S +  L    S  K    A  +F  + +     +N +I G + N 
Sbjct: 283 RVHELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNG 342

Query: 87  MPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVG 146
             + ++  +T ++    + PD+FT   V+ A +   D      +HG++I      D++V 
Sbjct: 343 CSEDAVRLFTRMQLEN-VKPDSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQDVYVL 401

Query: 147 AALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDM-----V 201
            AL+D+Y K   V  AR +F+   E+  + WN+MI G   +   + ++ +F +M     V
Sbjct: 402 TALIDMYAKCGRVNIARILFNSARERHVITWNAMIHGYGSHGFGKAAVELFEEMKSIGIV 461

Query: 202 RNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEV 261
            N  T+L   S  +    V E +E    M+ +  GL+ G   +      +V    + G++
Sbjct: 462 PNETTFLSVLSACSHAGLVDEGREYFTSMK-EDYGLEPGMEHY----GTMVDLLGRAGKL 516

Query: 262 ERA 264
           + A
Sbjct: 517 DEA 519


>gi|356555301|ref|XP_003545972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Glycine max]
          Length = 858

 Score =  540 bits (1391), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 282/776 (36%), Positives = 451/776 (58%), Gaps = 5/776 (0%)

Query: 12  FLSLLKGAKTQSQLT---QTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIP 68
           F S+LK    +  L    + H   ++ GF++D      L    +       +R LF  I 
Sbjct: 85  FPSVLKACSMKRDLNMGRKVHGMAVVTGFESDGFVANTLVVMYAKCGLLDDSRRLFGGIV 144

Query: 69  KPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGV 128
           + ++  +N +   +  +E+   ++  +  + + + + P+ F+ S +L+A +   +  +G 
Sbjct: 145 ERNVVSWNALFSCYVQSELCGEAVGLFKEMVR-SGIMPNEFSISIILNACAGLQEGDLGR 203

Query: 129 LLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNC 188
            +HG  +  G   D F   ALVD+Y K   ++ A  VF  +   D V WN++I+G + + 
Sbjct: 204 KIHGLMLKMGLDLDQFSANALVDMYSKAGEIEGAVAVFQDIAHPDVVSWNAIIAGCVLHD 263

Query: 189 CFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVL 248
           C  D   +  D ++  GT  +  ++++ L A A +    LG ++    +K+  H  ++  
Sbjct: 264 C-NDLALMLLDEMKGSGTRPNMFTLSSALKACAAMGFKELGRQLHSSLIKMDAHSDLFAA 322

Query: 249 TGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAER 308
            GLV  YSKC  ++ A   +  + + D+I+ NA+ISGY+  G    ++ LF ++ +    
Sbjct: 323 VGLVDMYSKCEMMDDARRAYDSMPKKDIIAWNALISGYSQCGDHLDAVSLFSKMFSEDID 382

Query: 309 VNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKL 368
            N +T+  ++        + +   IH+  +KSGI S+  V+ +L   Y + N ++ A K+
Sbjct: 383 FNQTTLSTVLKSVASLQAIKVCKQIHTISIKSGIYSDFYVINSLLDTYGKCNHIDEASKI 442

Query: 369 FDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAI 428
           F+E + + L ++ +MI  Y+Q G  EEA+ L+ +MQ + + P+P   SS+L+ACA L A 
Sbjct: 443 FEERTWEDLVAYTSMITAYSQYGDGEEALKLYLQMQDADIKPDPFICSSLLNACANLSAY 502

Query: 429 SLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGY 488
             GK +H       F  +I+ S +L++MYAKCG+I +A   F  + ++  V+W+ MI GY
Sbjct: 503 EQGKQLHVHAIKFGFMCDIFASNSLVNMYAKCGSIEDADRAFSEIPNRGIVSWSAMIGGY 562

Query: 489 GLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPL 548
             HGHG EAL+LF++ML  G+ P+ +T +SVL AC+HAGLV EG + F+ M    G KP 
Sbjct: 563 AQHGHGKEALRLFNQMLRDGVPPNHITLVSVLCACNHAGLVNEGKQYFEKMEVMFGIKPT 622

Query: 549 AEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLF 608
            EHYACM+D+LGR+G+L +A+E +  +  E    VWGALLGA  IHK+  L + A++ LF
Sbjct: 623 QEHYACMIDLLGRSGKLNEAVELVNSIPFEADGFVWGALLGAARIHKNIELGQKAAKMLF 682

Query: 609 ELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGD 668
           +L+PE  G HVLL+NIY++   +   A VR+ +K  K+ K PG + IE+    + F  GD
Sbjct: 683 DLEPEKSGTHVLLANIYASAGMWENVAKVRKFMKDSKVKKEPGMSWIEIKDKVYTFIVGD 742

Query: 669 QLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIA 728
           + H +S  IYA L++L   + +AG+ +     +H+V++ EKE ++  HSEKLA+AFGLIA
Sbjct: 743 RSHSRSDEIYAKLDQLGDLLSKAGYSSIVEIDIHNVDKSEKEKLLYHHSEKLAVAFGLIA 802

Query: 729 TEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           T PG  IR+ KNLR+C+DCHT  KF+ K+  R I+VRD NRFHHFK G CSCGDYW
Sbjct: 803 TPPGGPIRVKKNLRICVDCHTFFKFVCKIVSREIIVRDINRFHHFKDGSCSCGDYW 858



 Score =  254 bits (648), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 174/604 (28%), Positives = 308/604 (50%), Gaps = 12/604 (1%)

Query: 27  QTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNE 86
           + HA +I  GF  D S    L    S  +   YAR L     + D+  ++ ++ G+  N 
Sbjct: 2   ELHAHLIKFGFSRDPSLRNHLVTLYSKCRRFGYARKLVDESSELDVVSWSSLLSGYVQNG 61

Query: 87  MPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVG 146
             + ++  +  +     +  + FT+  VL A S   D ++G  +HG A+V+G+ SD FV 
Sbjct: 62  FVEEALLVFNEMCL-LGVKCNEFTFPSVLKACSMKRDLNMGRKVHGMAVVTGFESDGFVA 120

Query: 147 AALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGT 206
             LV +Y K   +  +R++F  + E++ V WN++ S  +++    +++ +F +MVR+ G 
Sbjct: 121 NTLVVMYAKCGLLDDSRRLFGGIVERNVVSWNALFSCYVQSELCGEAVGLFKEMVRS-GI 179

Query: 207 WLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAEL 266
             +  S++ +L A A +QE  LG +I  L LK+G     +    LV  YSK GE+E A  
Sbjct: 180 MPNEFSISIILNACAGLQEGDLGRKIHGLMLKMGLDLDQFSANALVDMYSKAGEIEGAVA 239

Query: 267 LFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGH 326
           +F+DI  PD++S NA+I+G   +   + +L L  ++  S  R N  T+   +      G 
Sbjct: 240 VFQDIAHPDVVSWNAIIAGCVLHDCNDLALMLLDEMKGSGTRPNMFTLSSALKACAAMGF 299

Query: 327 LHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAG 386
             L   +HS  +K    S+      L  +YS+   M+ AR+ +D   +K + +WNA+I+G
Sbjct: 300 KELGRQLHSSLIKMDAHSDLFAAVGLVDMYSKCEMMDDARRAYDSMPKKDIIAWNALISG 359

Query: 387 YTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESN 446
           Y+Q G   +A+SLF +M +  +  N  T+S++L + A L AI + K +H +       S+
Sbjct: 360 YSQCGDHLDAVSLFSKMFSEDIDFNQTTLSTVLKSVASLQAIKVCKQIHTISIKSGIYSD 419

Query: 447 IYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLH 506
            YV  +L+D Y KC +I EA ++F+  + +  V + +MI+ Y  +G G EAL+L+ +M  
Sbjct: 420 FYVINSLLDTYGKCNHIDEASKIFEERTWEDLVAYTSMITAYSQYGDGEEALKLYLQMQD 479

Query: 507 SGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYA--CMVDILGRAGQ 564
           + I+P      S+L AC++     +G ++    +H   F  + + +A   +V++  + G 
Sbjct: 480 ADIKPDPFICSSLLNACANLSAYEQGKQLH---VHAIKFGFMCDIFASNSLVNMYAKCGS 536

Query: 565 LEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLA-RVASEKLFELDPENVGYHVLLSN 623
           +E A      +    G   W A++G    H     A R+ ++ L +  P N   H+ L +
Sbjct: 537 IEDADRAFSEIP-NRGIVSWSAMIGGYAQHGHGKEALRLFNQMLRDGVPPN---HITLVS 592

Query: 624 IYSA 627
           +  A
Sbjct: 593 VLCA 596



 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 131/505 (25%), Positives = 238/505 (47%), Gaps = 5/505 (0%)

Query: 3   MKTPQSRNLFLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARA 62
           M    S ++ L+   G +      + H  ++  G   D  +   L    S       A A
Sbjct: 180 MPNEFSISIILNACAGLQEGDLGRKIHGLMLKMGLDLDQFSANALVDMYSKAGEIEGAVA 239

Query: 63  LFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACC 122
           +F  I  PD+  +N II G   ++    ++     + K +   P+ FT S  L A +A  
Sbjct: 240 VFQDIAHPDVVSWNAIIAGCVLHDCNDLALMLLDEM-KGSGTRPNMFTLSSALKACAAMG 298

Query: 123 DRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMIS 182
            + +G  LH   I     SDLF    LVD+Y K   +  AR+ +D MP+KD + WN++IS
Sbjct: 299 FKELGRQLHSSLIKMDAHSDLFAAVGLVDMYSKCEMMDDARRAYDSMPKKDIIAWNALIS 358

Query: 183 GLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFH 242
           G  +     D++ +F  M      + + T+++ VL +VA +Q +++  +I  + +K G +
Sbjct: 359 GYSQCGDHLDAVSLFSKMFSEDIDF-NQTTLSTVLKSVASLQAIKVCKQIHTISIKSGIY 417

Query: 243 DHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQL 302
              YV+  L+  Y KC  ++ A  +F +    DL++  +MI+ Y+  G  E +L+L+ Q+
Sbjct: 418 SDFYVINSLLDTYGKCNHIDEASKIFEERTWEDLVAYTSMITAYSQYGDGEEALKLYLQM 477

Query: 303 LASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEM 362
             +  + +      L+              +H   +K G + +     +L  +Y++   +
Sbjct: 478 QDADIKPDPFICSSLLNACANLSAYEQGKQLHVHAIKFGFMCDIFASNSLVNMYAKCGSI 537

Query: 363 EAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSAC 422
           E A + F E   + + SW+AMI GY Q+G  +EA+ LF +M    V PN +T+ S+L AC
Sbjct: 538 EDADRAFSEIPNRGIVSWSAMIGGYAQHGHGKEALRLFNQMLRDGVPPNHITLVSVLCAC 597

Query: 423 AQLGAISLGKWVHELVKSR-NFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSE-VT 480
              G ++ GK   E ++     +        +ID+  + G + EA EL + +  +++   
Sbjct: 598 NHAGLVNEGKQYFEKMEVMFGIKPTQEHYACMIDLLGRSGKLNEAVELVNSIPFEADGFV 657

Query: 481 WNTMISGYGLHGHGLEALQLFSEML 505
           W  ++    +H + +E  Q  ++ML
Sbjct: 658 WGALLGAARIHKN-IELGQKAAKML 681



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 162/311 (52%)

Query: 230 MEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCN 289
           ME+    +K GF     +   LV+ YSKC     A  L  +    D++S ++++SGY  N
Sbjct: 1   MELHAHLIKFGFSRDPSLRNHLVTLYSKCRRFGYARKLVDESSELDVVSWSSLLSGYVQN 60

Query: 290 GKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVL 349
           G  E +L +F ++     + N  T   ++        L++   +H   + +G  S+  V 
Sbjct: 61  GFVEEALLVFNEMCLLGVKCNEFTFPSVLKACSMKRDLNMGRKVHGMAVVTGFESDGFVA 120

Query: 350 TALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVA 409
             L  +Y++   ++ +R+LF    E+++ SWNA+ + Y Q+ L  EA+ LF+EM  S + 
Sbjct: 121 NTLVVMYAKCGLLDDSRRLFGGIVERNVVSWNALFSCYVQSELCGEAVGLFKEMVRSGIM 180

Query: 410 PNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEAREL 469
           PN  ++S IL+ACA L    LG+ +H L+     + + + + AL+DMY+K G I  A  +
Sbjct: 181 PNEFSISIILNACAGLQEGDLGRKIHGLMLKMGLDLDQFSANALVDMYSKAGEIEGAVAV 240

Query: 470 FDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLV 529
           F  ++H   V+WN +I+G  LH     AL L  EM  SG RP+  T  S L AC+  G  
Sbjct: 241 FQDIAHPDVVSWNAIIAGCVLHDCNDLALMLLDEMKGSGTRPNMFTLSSALKACAAMGFK 300

Query: 530 REGDEIFQSMI 540
             G ++  S+I
Sbjct: 301 ELGRQLHSSLI 311


>gi|224120094|ref|XP_002331135.1| predicted protein [Populus trichocarpa]
 gi|222872863|gb|EEF09994.1| predicted protein [Populus trichocarpa]
          Length = 799

 Score =  539 bits (1389), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 314/790 (39%), Positives = 451/790 (57%), Gaps = 23/790 (2%)

Query: 7   QSRNLFLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATC----YARA 62
           QS++LF   L        L +TH        + +L+       +L D    C     AR 
Sbjct: 21  QSKSLFRGKLIHQHLLKCLHRTH--------ETNLTNFDVPFEKLVDLYIACSELKIARH 72

Query: 63  LFFSIP-KP-DLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASA 120
           +F  +P +P ++ L+N++IR ++ N   + +I  Y  +     +TP+ FT+ FVL A SA
Sbjct: 73  VFDKMPHRPKNVVLWNLLIRAYAWNGPYEEAIDLYYKML-GYGITPNRFTFPFVLKACSA 131

Query: 121 CCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSM 180
             + S G  +H         S+++V  ALVD Y K   +  A++VFDKM ++D V WNSM
Sbjct: 132 LKEASEGREIHCDIKRLRLESNVYVSTALVDFYAKCGCLDDAKEVFDKMHKRDVVAWNSM 191

Query: 181 ISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLG 240
           ISG   +    D +      ++N  +  +S+++  VLPAVA+V  LR G EI    ++ G
Sbjct: 192 ISGFSLHEGSYDEVARLLVQMQNDVS-PNSSTIVGVLPAVAQVNSLRHGKEIHGFCVRRG 250

Query: 241 FHDHVYVLTGLVSFYSKCGEVERAELLFR--DIVRPDLISCNAMISGYTCNGKTESSLRL 298
           F   V V TG++  Y KC  ++ A  +F    IV+ + ++ +AM+  Y        +L L
Sbjct: 251 FVGDVVVGTGILDVYGKCQCIDYARRIFDMMGIVKNE-VTWSAMVGAYVVCDFMREALEL 309

Query: 299 FRQLLASAERV---NSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTV 355
           F QLL   + V   ++ T+  +I V      L    C+H + +KSG V +  V   L ++
Sbjct: 310 FCQLLMLKDDVIVLSAVTLATVIRVCANLTDLSTGTCLHCYAIKSGFVLDLMVGNTLLSM 369

Query: 356 YSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTV 415
           Y++   +  A + F+E   +   S+ A+I+GY QNG +EE + +F EMQ S + P   T+
Sbjct: 370 YAKCGIINGAMRFFNEMDLRDAVSFTAIISGYVQNGNSEEGLRMFLEMQLSGINPEKATL 429

Query: 416 SSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSH 475
           +S+L ACA L  +  G   H       F ++  +  ALIDMYAKCG I  AR++FD M  
Sbjct: 430 ASVLPACAHLAGLHYGSCSHCYAIICGFTADTMICNALIDMYAKCGKIDTARKVFDRMHK 489

Query: 476 KSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEI 535
           +  V+WNTMI  YG+HG GLEAL LF  M   G++P  VTF+ ++ ACSH+GLV EG   
Sbjct: 490 RGIVSWNTMIIAYGIHGIGLEALLLFDNMQSEGLKPDDVTFICLISACSHSGLVAEGKYW 549

Query: 536 FQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHK 595
           F +M  D G  P  EHYACMVD+L RAG  ++   FI+ + +EP   VWGALL AC ++K
Sbjct: 550 FNAMTQDFGIIPRMEHYACMVDLLSRAGLFKEVHSFIEKMPLEPDVRVWGALLSACRVYK 609

Query: 596 DTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLI 655
           +  L    S+K+ +L PE+ G  VLLSN+YSA   +  AA VR   K++   K+PGC+ I
Sbjct: 610 NVELGEGVSKKIQKLGPESTGNFVLLSNMYSAVGRWDDAAQVRFTQKEQGFEKSPGCSWI 669

Query: 656 EVGGTPHVFTSGD-QLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMK 714
           E+ G  H F  G  + HPQ T I   L++L  +M+  G+Q E+     DVEEEEKE ++ 
Sbjct: 670 EISGVVHTFLGGGYRSHPQLTQISNKLDELLVEMKRLGYQAESSYVFQDVEEEEKERVLL 729

Query: 715 VHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFK 774
            HSEKLAIAFG+++  P   I + KNLRVC DCHTA KFIS VT R I VRDA+RFHHFK
Sbjct: 730 YHSEKLAIAFGILSLSPDKHIIVTKNLRVCGDCHTAIKFISLVTKRDITVRDASRFHHFK 789

Query: 775 GGVCSCGDYW 784
            G+C+CGD+W
Sbjct: 790 DGICNCGDFW 799


>gi|124360536|gb|ABN08546.1| Tetratricopeptide-like helical [Medicago truncatula]
          Length = 1083

 Score =  539 bits (1389), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 292/783 (37%), Positives = 444/783 (56%), Gaps = 25/783 (3%)

Query: 12  FLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPD 71
           F +L       +   + HA +++ G   ++   TKL +          +R+ F  I K +
Sbjct: 25  FNALFNSCVNVNATKKLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIHKKN 84

Query: 72  LFLFNVIIRGFSN-----------NEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASA 120
           +F +N II  +             N++   S+C   HLR      PD +T+  +L A  +
Sbjct: 85  IFSWNSIISAYVRFGKYHEAMNCVNQL--FSMCGGGHLR------PDFYTFPPILKACVS 136

Query: 121 CCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSM 180
             D   G  +H      G+  D+FV A+LV LY ++  +  A KVF  MP KD   WN+M
Sbjct: 137 LVD---GKKVHCCVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAM 193

Query: 181 ISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLG 240
           ISG  +N     ++ V   M +  G  +D+ +VA++LP  A+  ++  G+ I    LK G
Sbjct: 194 ISGFCQNGNAAGALGVLNRM-KGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHG 252

Query: 241 FHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFR 300
               V+V   L++ YSK G ++ A+++F  +   DL+S N++I+ Y  N    ++LR F+
Sbjct: 253 LDSDVFVSNALINMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFK 312

Query: 301 QLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVL-TALSTVYSRL 359
            +     R +  T+V L  +F       ++  I  F ++   +    V+  AL  +Y++L
Sbjct: 313 GMQLGGIRPDLLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVVIGNALVNMYAKL 372

Query: 360 NEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASK-VAPNPVTVSSI 418
             M  A  +FD+   K   SWN ++ GYTQNGL  EAI  +  M+  +   PN  T  SI
Sbjct: 373 GYMNCAHTVFDQLPRKDTISWNTLVTGYTQNGLASEAIDAYNMMEECRDTIPNQGTWVSI 432

Query: 419 LSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSE 478
           + A + +GA+  G  +H  +   +   +++V+T LID+Y KCG + +A  LF  +   + 
Sbjct: 433 IPAYSHVGALQQGMKIHAKLIKNSLYLDVFVATCLIDLYGKCGRLEDAMSLFYEIPRDTS 492

Query: 479 VTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQS 538
           V WN +I+  G+HG G EALQLF +ML   ++   +TF+S+L ACSH+GLV EG + F  
Sbjct: 493 VPWNAIIASLGIHGRGEEALQLFKDMLAERVKADHITFVSLLSACSHSGLVDEGQKCFDI 552

Query: 539 MIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTN 598
           M  ++G KP  +HY CMVD+LGRAG LEKA E ++ + ++P  ++WGALL AC I+ +  
Sbjct: 553 MQKEYGIKPSLKHYGCMVDLLGRAGYLEKAYELVRNMPIQPDASIWGALLSACKIYGNAE 612

Query: 599 LARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVG 658
           L  +AS++L E+D ENVGY+VLLSNIY+    +     VR + + R L K PG + + VG
Sbjct: 613 LGTLASDRLLEVDSENVGYYVLLSNIYANTEKWEGVIKVRSLARDRGLRKTPGWSSVVVG 672

Query: 659 GTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSE 718
               VF +G+Q HP+ T IY  L+ L+ KM+  G+  +      D+EE+EKE ++  HSE
Sbjct: 673 SKAEVFYTGNQTHPKYTEIYKELKVLSAKMKSLGYVPDYSFVYQDIEEDEKEQILNSHSE 732

Query: 719 KLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVC 778
           +LAIAFG+I+T P + IRI KNLRVC DCH ATK+IS+++ R IVVRD+NRFHHFK G+C
Sbjct: 733 RLAIAFGIISTPPRSPIRIFKNLRVCGDCHNATKYISRISEREIVVRDSNRFHHFKDGIC 792

Query: 779 SCG 781
           SC 
Sbjct: 793 SCA 795


>gi|297798510|ref|XP_002867139.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
 gi|297312975|gb|EFH43398.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
          Length = 824

 Score =  538 bits (1385), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 278/759 (36%), Positives = 445/759 (58%), Gaps = 11/759 (1%)

Query: 29  HAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNEMP 88
           HA++++     ++    KL +          AR  F  I   D++ +N++I G+      
Sbjct: 74  HARLVVSNAIQNVCISAKLVNLYCYLGNVALARYTFDHIHNRDVYAWNLMISGYGRAGYS 133

Query: 89  KSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAA 148
              I  ++    ++ L PD  T+  VL A   C + + G  +H  A+  G+  D++V A+
Sbjct: 134 SEVIRCFSLFMLSSGLQPDYRTFPSVLKA---CRNVTDGNKIHCLALKFGFMWDVYVAAS 190

Query: 149 LVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWL 208
           L+ LY ++  V +AR +FD+MP +D   WN+MISG  ++   ++++      + +G   +
Sbjct: 191 LIHLYCRYGAVVNARILFDEMPTRDMGSWNAMISGYCQSGNAKEAL-----TLSDGLRAM 245

Query: 209 DSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLF 268
           DS +V ++L A  E  +   G+ I    +K G    ++V   L+  Y++ G ++  + +F
Sbjct: 246 DSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGSLKDCQKVF 305

Query: 269 RDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLH 328
             +   DLIS N++I  Y  N +   ++ LF+++  S  + +  T++ L  +    G + 
Sbjct: 306 DRMYVRDLISWNSIIKAYELNEQPLRAILLFQEMRLSRIQPDCLTLISLASILSQLGEIR 365

Query: 329 LTNCIHSFCLKSG-IVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGY 387
               +  F L+ G  + + ++  A+  +Y++L  +++AR +F+    K + SWN +I+GY
Sbjct: 366 ACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNKDVISWNTIISGY 425

Query: 388 TQNGLTEEAISLFQ--EMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFES 445
            QNG   EAI ++   E +  +++ N  T  S+L AC+Q GA+  G  +H  +       
Sbjct: 426 AQNGFASEAIEMYNIMEEEGGEISANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYL 485

Query: 446 NIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEML 505
           +++V T+L DMY KCG + +A  LF  +   + V WNT+I+ +G HGHG +A+ LF EML
Sbjct: 486 DVFVGTSLADMYGKCGRLDDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEML 545

Query: 506 HSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQL 565
             G++P  +TF+++L ACSH+GLV EG+  F+ M  D+G  P  +HY CMVD+ GRAGQL
Sbjct: 546 DEGVKPDHITFVTLLSACSHSGLVDEGEWCFEMMQTDYGITPSLKHYGCMVDLYGRAGQL 605

Query: 566 EKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIY 625
           E AL FIK + ++P  ++WGALL AC +H + +L ++ASE LFE++PE+VGYHVLLSN+Y
Sbjct: 606 EIALNFIKSMPLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMY 665

Query: 626 SAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLN 685
           ++   +     +R +   + L K PG + +EV     VF +G+Q HP    +Y  L  L+
Sbjct: 666 ASAGKWEGVDEIRSITSGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALH 725

Query: 686 GKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCL 745
            K++  G+  +    L DVE++EKE ++  HSE+LA+AF LI T   T IRI KNLRVC 
Sbjct: 726 EKLKMVGYVPDHRFVLQDVEDDEKEHILMSHSERLAMAFALITTPAKTTIRIFKNLRVCG 785

Query: 746 DCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           DCH+ TKFISK+T R I+VRD+NRFHHFK GVCSCGDYW
Sbjct: 786 DCHSVTKFISKITEREIIVRDSNRFHHFKNGVCSCGDYW 824



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 157/508 (30%), Positives = 254/508 (50%), Gaps = 16/508 (3%)

Query: 121 CCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSM 180
           C +      LH   +VS    ++ + A LV+LY     V  AR  FD +  +D   WN M
Sbjct: 64  CTNLQSAKCLHARLVVSNAIQNVCISAKLVNLYCYLGNVALARYTFDHIHNRDVYAWNLM 123

Query: 181 ISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLG 240
           ISG  +     + I  F   + + G   D  +  +VL A   V +   G +I CL LK G
Sbjct: 124 ISGYGRAGYSSEVIRCFSLFMLSSGLQPDYRTFPSVLKACRNVTD---GNKIHCLALKFG 180

Query: 241 FHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFR 300
           F   VYV   L+  Y + G V  A +LF ++   D+ S NAMISGY  +G  + +L L  
Sbjct: 181 FMWDVYVAASLIHLYCRYGAVVNARILFDEMPTRDMGSWNAMISGYCQSGNAKEALTLSD 240

Query: 301 QLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLN 360
            L A    ++S T+V L+      G  +    IHS+ +K G+ S   V   L  +Y+   
Sbjct: 241 GLRA----MDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFG 296

Query: 361 EMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILS 420
            ++  +K+FD    + L SWN++I  Y  N     AI LFQEM+ S++ P+ +T+ S+ S
Sbjct: 297 SLKDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAILLFQEMRLSRIQPDCLTLISLAS 356

Query: 421 ACAQLGAISLGKWVHELVKSRN-FESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEV 479
             +QLG I   + V      +  F  +I +  A++ MYAK G +  AR +F+ + +K  +
Sbjct: 357 ILSQLGEIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNKDVI 416

Query: 480 TWNTMISGYGLHGHGLEALQLFSEMLHSG--IRPSGVTFLSVLYACSHAGLVREGDEIFQ 537
           +WNT+ISGY  +G   EA+++++ M   G  I  +  T++SVL ACS AG +R+G ++  
Sbjct: 417 SWNTIISGYAQNGFASEAIEMYNIMEEEGGEISANQGTWVSVLPACSQAGALRQGMKLHG 476

Query: 538 SMIHDHGFKPLAEHYACMVDILGRAGQLEKALE-FIKGLAVEPGPAVWGALLGACMIHKD 596
            ++ + G          + D+ G+ G+L+ AL  F +   V   P  W  L+     H  
Sbjct: 477 RLLKN-GLYLDVFVGTSLADMYGKCGRLDDALSLFYQIPRVNSVP--WNTLIACHGFHGH 533

Query: 597 TNLARVASEKLFE--LDPENVGYHVLLS 622
              A +  +++ +  + P+++ +  LLS
Sbjct: 534 GEKAVMLFKEMLDEGVKPDHITFVTLLS 561



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 147/538 (27%), Positives = 260/538 (48%), Gaps = 19/538 (3%)

Query: 6   PQSRNLFLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFF 65
           P  R  F S+LK  +  +   + H   +  GF  D+     L H    + A   AR LF 
Sbjct: 151 PDYRT-FPSVLKACRNVTDGNKIHCLALKFGFMWDVYVAASLIHLYCRYGAVVNARILFD 209

Query: 66  SIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRS 125
            +P  D+  +N +I G+  +   K ++     LR       D+ T   +LSA +   D +
Sbjct: 210 EMPTRDMGSWNAMISGYCQSGNAKEALTLSDGLR-----AMDSVTVVSLLSACTEAGDFN 264

Query: 126 IGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLM 185
            GV +H ++I  G  S+LFV   L+DLY +F  +K  +KVFD+M  +D + WNS+I    
Sbjct: 265 RGVTIHSYSIKHGLESELFVSNKLIDLYAEFGSLKDCQKVFDRMYVRDLISWNSIIKAYE 324

Query: 186 KNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLG-FHDH 244
            N     +I +F +M R      D  ++ ++   ++++ E+R    +Q   L+ G F + 
Sbjct: 325 LNEQPLRAILLFQEM-RLSRIQPDCLTLISLASILSQLGEIRACRSVQGFTLRKGWFLED 383

Query: 245 VYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLA 304
           + +   +V  Y+K G V+ A  +F  +   D+IS N +ISGY  NG    ++ ++  +  
Sbjct: 384 ITIGNAVVVMYAKLGLVDSARAVFNWLPNKDVISWNTIISGYAQNGFASEAIEMYNIMEE 443

Query: 305 SAERV--NSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEM 362
               +  N  T V ++P     G L     +H   LK+G+  +  V T+L+ +Y +   +
Sbjct: 444 EGGEISANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVGTSLADMYGKCGRL 503

Query: 363 EAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSAC 422
           + A  LF +    +   WN +IA +  +G  E+A+ LF+EM    V P+ +T  ++LSAC
Sbjct: 504 DDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSAC 563

Query: 423 AQLGAISLGKWVHELVKSR-NFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVT- 480
           +  G +  G+W  E++++      ++     ++D+Y + G +  A      M  + + + 
Sbjct: 564 SHSGLVDEGEWCFEMMQTDYGITPSLKHYGCMVDLYGRAGQLEIALNFIKSMPLQPDASI 623

Query: 481 WNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTF---LSVLYACSHAGLVREGDEI 535
           W  ++S   +HG+ ++  ++ SE L   + P  V +   LS +YA   AG     DEI
Sbjct: 624 WGALLSACRVHGN-VDLGKIASEHLFE-VEPEHVGYHVLLSNMYA--SAGKWEGVDEI 677



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 43/122 (35%), Positives = 66/122 (54%), Gaps = 7/122 (5%)

Query: 415 VSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMS 474
           V ++   C  L +    K +H  +   N   N+ +S  L+++Y   GN+  AR  FD + 
Sbjct: 57  VHTLFRYCTNLQS---AKCLHARLVVSNAIQNVCISAKLVNLYCYLGNVALARYTFDHIH 113

Query: 475 HKSEVTWNTMISGYGLHGHGLEALQLFSE-MLHSGIRPSGVTFLSVLYACSHAGLVREGD 533
           ++    WN MISGYG  G+  E ++ FS  ML SG++P   TF SVL AC +   V +G+
Sbjct: 114 NRDVYAWNLMISGYGRAGYSSEVIRCFSLFMLSSGLQPDYRTFPSVLKACRN---VTDGN 170

Query: 534 EI 535
           +I
Sbjct: 171 KI 172


>gi|168044807|ref|XP_001774871.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162673765|gb|EDQ60283.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 902

 Score =  538 bits (1385), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 290/781 (37%), Positives = 444/781 (56%), Gaps = 7/781 (0%)

Query: 8   SRNLFLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATC----YARAL 63
            R   +S L   K+   L +   +I     Q  L    K+A+ + +  A C     AR +
Sbjct: 125 DRTTIMSFLSSCKSPGAL-EWGREIHFQAMQAGLLFDVKVANCILNMYAKCGSIEEAREV 183

Query: 64  FFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCD 123
           F  + K  +  + + I G+++    +++   +  + +   + P+  TY  VL+A S+   
Sbjct: 184 FDKMEKKSVVSWTITIGGYADCGRSETAFEIFQKMEQE-GVVPNRITYISVLNAFSSPAA 242

Query: 124 RSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISG 183
              G  +H   + +G+ SD  VG ALV +Y K    K  R+VF+K+  +D + WN+MI G
Sbjct: 243 LKWGKAVHSRILNAGHESDTAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGG 302

Query: 184 LMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHD 243
           L +   ++++  V+  M R G    +  +   +L A      L  G EI     K GF  
Sbjct: 303 LAEGGYWEEASEVYNQMQREG-VMPNKITYVILLNACVNSAALHWGKEIHSRVAKAGFTS 361

Query: 244 HVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLL 303
            + V   L+S YS+CG ++ A L+F  +VR D+IS  AMI G   +G    +L +++++ 
Sbjct: 362 DIGVQNALISMYSRCGSIKDARLVFDKMVRKDVISWTAMIGGLAKSGFGAEALTVYQEMQ 421

Query: 304 ASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEME 363
            +    N  T   ++        L     IH   +++G+ +++ V   L  +YS    ++
Sbjct: 422 QAGVEPNRVTYTSILNACSSPAALEWGRRIHQQVVEAGLATDAHVGNTLVNMYSMCGSVK 481

Query: 364 AARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACA 423
            AR++FD   ++ + ++NAMI GY  + L +EA+ LF  +Q   + P+ VT  ++L+ACA
Sbjct: 482 DARQVFDRMIQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNACA 541

Query: 424 QLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNT 483
             G++   + +H LV+   F S+  V  AL+  YAKCG+  +A  +F+ M+ ++ ++WN 
Sbjct: 542 NSGSLEWAREIHTLVRKGGFFSDTSVGNALVSTYAKCGSFSDASIVFEKMTKRNVISWNA 601

Query: 484 MISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDH 543
           +I G   HG G +ALQLF  M   G++P  VTF+S+L ACSHAGL+ EG   F SM  D 
Sbjct: 602 IIGGSAQHGRGQDALQLFERMKMEGVKPDIVTFVSLLSACSHAGLLEEGRRYFCSMSQDF 661

Query: 544 GFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVA 603
              P  EHY CMVD+LGRAGQL++A   IK +  +    +WGALLGAC IH +  +A  A
Sbjct: 662 AIIPTIEHYGCMVDLLGRAGQLDEAEALIKTMPFQANTRIWGALLGACRIHGNVPVAERA 721

Query: 604 SEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHV 663
           +E   +LD +N   +V LS++Y+A   +  AA +R+++++R + K PG + I+VG   H 
Sbjct: 722 AESSLKLDLDNAVVYVALSHMYAAAGMWDSAAKLRKLMEQRGVTKEPGRSWIQVGDKLHY 781

Query: 664 FTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIA 723
           F + D+ HPQS  IYA L++L   M+  G+  +T + +HDV+E EKE  +  HSE+LAIA
Sbjct: 782 FVAEDRSHPQSEKIYAELDRLTHAMKMKGYVPDTRSVMHDVDEGEKENAVCHHSERLAIA 841

Query: 724 FGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDY 783
           +GLI+T PGT I I KNLRVC DCHTATKFISK+  R I+ RD NRFHHFK GVCSCGDY
Sbjct: 842 YGLISTPPGTRIHIFKNLRVCPDCHTATKFISKIVDREIIARDVNRFHHFKDGVCSCGDY 901

Query: 784 W 784
           W
Sbjct: 902 W 902



 Score =  245 bits (625), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 155/521 (29%), Positives = 258/521 (49%), Gaps = 5/521 (0%)

Query: 27  QTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALF--FSIPKPDLFLFNVIIRGFSN 84
           Q H  II H    D  TV  L +      +   AR ++   S  +  +  +N ++ G+  
Sbjct: 44  QVHQHIIQHRTVPDQYTVNALINMYIQCGSIEEARQVWKKLSYMERTVHSWNAMVVGYIQ 103

Query: 85  NEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLF 144
               + ++     ++++  L PD  T    LS+  +      G  +H  A+ +G   D+ 
Sbjct: 104 YGYIEKALKLLRQMQQH-GLAPDRTTIMSFLSSCKSPGALEWGREIHFQAMQAGLLFDVK 162

Query: 145 VGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNG 204
           V   ++++Y K   ++ AR+VFDKM +K  V W   I G   +C   ++ +     +   
Sbjct: 163 VANCILNMYAKCGSIEEAREVFDKMEKKSVVSWTITIGGY-ADCGRSETAFEIFQKMEQE 221

Query: 205 GTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERA 264
           G   +  +  +VL A +    L+ G  +    L  G      V T LV  Y+KCG  +  
Sbjct: 222 GVVPNRITYISVLNAFSSPAALKWGKAVHSRILNAGHESDTAVGTALVKMYAKCGSYKDC 281

Query: 265 ELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPF 324
             +F  +V  DLI+ N MI G    G  E +  ++ Q+       N  T V L+      
Sbjct: 282 RQVFEKLVNRDLIAWNTMIGGLAEGGYWEEASEVYNQMQREGVMPNKITYVILLNACVNS 341

Query: 325 GHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMI 384
             LH    IHS   K+G  S+  V  AL ++YSR   ++ AR +FD+   K + SW AMI
Sbjct: 342 AALHWGKEIHSRVAKAGFTSDIGVQNALISMYSRCGSIKDARLVFDKMVRKDVISWTAMI 401

Query: 385 AGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFE 444
            G  ++G   EA++++QEMQ + V PN VT +SIL+AC+   A+  G+ +H+ V      
Sbjct: 402 GGLAKSGFGAEALTVYQEMQQAGVEPNRVTYTSILNACSSPAALEWGRRIHQQVVEAGLA 461

Query: 445 SNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEM 504
           ++ +V   L++MY+ CG++ +AR++FD M  +  V +N MI GY  H  G EAL+LF  +
Sbjct: 462 TDAHVGNTLVNMYSMCGSVKDARQVFDRMIQRDIVAYNAMIGGYAAHNLGKEALKLFDRL 521

Query: 505 LHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGF 545
              G++P  VT++++L AC+++G +    EI  +++   GF
Sbjct: 522 QEEGLKPDKVTYINMLNACANSGSLEWAREI-HTLVRKGGF 561



 Score =  226 bits (576), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 144/508 (28%), Positives = 253/508 (49%), Gaps = 15/508 (2%)

Query: 123 DRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMP--EKDTVLWNSM 180
           D   G  +H H I      D +   AL+++Y +   ++ AR+V+ K+   E+    WN+M
Sbjct: 38  DLVAGRQVHQHIIQHRTVPDQYTVNALINMYIQCGSIEEARQVWKKLSYMERTVHSWNAM 97

Query: 181 ISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLG 240
           + G ++    + ++ +   M ++G    D T++ + L +      L  G EI    ++ G
Sbjct: 98  VVGYIQYGYIEKALKLLRQMQQHGLA-PDRTTIMSFLSSCKSPGALEWGREIHFQAMQAG 156

Query: 241 FHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFR 300
               V V   +++ Y+KCG +E A  +F  + +  ++S    I GY   G++E++  +F+
Sbjct: 157 LLFDVKVANCILNMYAKCGSIEEAREVFDKMEKKSVVSWTITIGGYADCGRSETAFEIFQ 216

Query: 301 QLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLN 360
           ++       N  T + ++  F     L     +HS  L +G  S+++V TAL  +Y++  
Sbjct: 217 KMEQEGVVPNRITYISVLNAFSSPAALKWGKAVHSRILNAGHESDTAVGTALVKMYAKCG 276

Query: 361 EMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILS 420
             +  R++F++   + L +WN MI G  + G  EEA  ++ +MQ   V PN +T   +L+
Sbjct: 277 SYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGYWEEASEVYNQMQREGVMPNKITYVILLN 336

Query: 421 ACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVT 480
           AC    A+  GK +H  V    F S+I V  ALI MY++CG+I +AR +FD M  K  ++
Sbjct: 337 ACVNSAALHWGKEIHSRVAKAGFTSDIGVQNALISMYSRCGSIKDARLVFDKMVRKDVIS 396

Query: 481 WNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMI 540
           W  MI G    G G EAL ++ EM  +G+ P+ VT+ S+L ACS    +  G  I Q ++
Sbjct: 397 WTAMIGGLAKSGFGAEALTVYQEMQQAGVEPNRVTYTSILNACSSPAALEWGRRIHQQVV 456

Query: 541 HDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLA 600
            + G    A     +V++    G ++ A +    + ++     + A++G    H   NL 
Sbjct: 457 -EAGLATDAHVGNTLVNMYSMCGSVKDARQVFDRM-IQRDIVAYNAMIGGYAAH---NLG 511

Query: 601 RVASEKLFE------LDPENVGYHVLLS 622
           + A  KLF+      L P+ V Y  +L+
Sbjct: 512 KEAL-KLFDRLQEEGLKPDKVTYINMLN 538



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 58/223 (26%), Positives = 105/223 (47%), Gaps = 9/223 (4%)

Query: 396 AISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALID 455
           A+ + Q +Q      N      +L  C ++  +  G+ VH+ +       + Y   ALI+
Sbjct: 7   AVDVVQYLQQQGAQVNSSDYMKMLKRCIEVKDLVAGRQVHQHIIQHRTVPDQYTVNALIN 66

Query: 456 MYAKCGNIVEARELFDLMSHKSEV--TWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSG 513
           MY +CG+I EAR+++  +S+      +WN M+ GY  +G+  +AL+L  +M   G+ P  
Sbjct: 67  MYIQCGSIEEARQVWKKLSYMERTVHSWNAMVVGYIQYGYIEKALKLLRQMQQHGLAPDR 126

Query: 514 VTFLSVLYACSHAGLVREGDEI-FQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFI 572
            T +S L +C   G +  G EI FQ+M    G     +   C++++  + G +E+A E  
Sbjct: 127 TTIMSFLSSCKSPGALEWGREIHFQAM--QAGLLFDVKVANCILNMYAKCGSIEEAREVF 184

Query: 573 KGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENV 615
             +  +     W   +G    + D   +  A E   +++ E V
Sbjct: 185 DKME-KKSVVSWTITIGG---YADCGRSETAFEIFQKMEQEGV 223


>gi|224107977|ref|XP_002314675.1| predicted protein [Populus trichocarpa]
 gi|222863715|gb|EEF00846.1| predicted protein [Populus trichocarpa]
          Length = 845

 Score =  537 bits (1384), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 289/809 (35%), Positives = 455/809 (56%), Gaps = 43/809 (5%)

Query: 16  LKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKL---AHRLSDFKATCYA-RALFFSIPKPD 71
            K  KT ++L Q H+QI  +G  +   ++T L      +  F++  YA +AL   I    
Sbjct: 40  FKKCKTMTELKQLHSQITKNGLNHHPLSLTNLISSCTEMGTFESLEYAQKALELFIEDNG 99

Query: 72  L----FLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIG 127
           +    ++F+ +IRGFS   +   +I  +  L    A+ PDNFT+ FVLSA +     + G
Sbjct: 100 IMGTHYMFSSLIRGFSACGLGYKAIVVFRQLMCMGAV-PDNFTFPFVLSACTKSAALTEG 158

Query: 128 VLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKN 187
             +HG  +  G+  D+FV  +L+  Y +   +   R+VFDKM E++ V W S+I G  K 
Sbjct: 159 FQVHGAIVKMGFERDMFVENSLIHFYGECGEIDCMRRVFDKMSERNVVSWTSLIGGYAKR 218

Query: 188 CCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEI-QCLGLKLGFHDHVY 246
            C+++++ +F +MV  G    +S ++  V+ A A++Q+L+LG ++  C+G +L    +  
Sbjct: 219 GCYKEAVSLFFEMVEVG-IRPNSVTMVGVISACAKLQDLQLGEQVCTCIG-ELELEVNAL 276

Query: 247 VLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASA 306
           ++  LV  Y KCG +++A  +F + V  +L+  N ++S Y   G     L +  ++L   
Sbjct: 277 MVNALVDMYMKCGAIDKARKIFDECVDKNLVLYNTIMSNYVRQGLAREVLAVLGEMLKHG 336

Query: 307 ERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAAR 366
            R +  T++  +        +      H + L++G+    +V  A+  +Y +  + E A 
Sbjct: 337 PRPDRITMLSAVSACSELDDVSCGKWCHGYVLRNGLEGWDNVCNAIINMYMKCGKQEMAC 396

Query: 367 KLFDESSEKSLASWNAMIAGYTQNGLTE-------------------------------E 395
           ++FD    K+  SWN++IAG+ +NG  E                               E
Sbjct: 397 RVFDRMLNKTRVSWNSLIAGFVRNGDMESAWKIFSAMPDSDLVSWNTMIGALVQESMFKE 456

Query: 396 AISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALID 455
           AI LF+ MQ+  +  + VT+  + SAC  LGA+ L KW+H  +K ++   ++++ TAL+D
Sbjct: 457 AIELFRVMQSEGITADKVTMVGVASACGYLGALDLAKWIHGYIKKKDIHFDMHLGTALVD 516

Query: 456 MYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVT 515
           M+A+CG+   A ++F+ M  +    W   I    + G+G  A++LF EML  GI+P GV 
Sbjct: 517 MFARCGDPQSAMQVFNKMVKRDVSAWTAAIGAMAMEGNGTGAIELFDEMLQQGIKPDGVV 576

Query: 516 FLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGL 575
           F+++L A SH GLV +G  IF+SM   +G  P A HY CMVD+LGRAG L +AL  I  +
Sbjct: 577 FVALLTALSHGGLVEQGWHIFRSMKDIYGIAPQAVHYGCMVDLLGRAGLLSEALSLINSM 636

Query: 576 AVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAA 635
            +EP   +WG+LL AC +HK+ ++A  A+E++ ELDPE  G HVLLSNIY++   +   A
Sbjct: 637 QMEPNDVIWGSLLAACRVHKNVDIAAYAAERISELDPERTGIHVLLSNIYASAGRWDDVA 696

Query: 636 TVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQT 695
            VR  +K++   K PG + IE+ G    FT+GD+ HP+ T I  ML+++  ++R+ G+  
Sbjct: 697 KVRLHLKEKGAHKMPGSSSIEINGKIFEFTTGDESHPEMTHIEPMLKEICCRLRDIGYVP 756

Query: 696 ETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFIS 755
           +    L DV E+EKE ++  HSEKLAIAF LI+T  G  IR+ KNLR+C DCH+  K +S
Sbjct: 757 DLTNVLLDVNEKEKEYLLSRHSEKLAIAFALISTGQGMPIRVAKNLRICSDCHSFAKLVS 816

Query: 756 KVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           K   R I+VRD NRFH F+ G CSCGDYW
Sbjct: 817 KSYSREIIVRDNNRFHFFQQGFCSCGDYW 845


>gi|449468888|ref|XP_004152153.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g13230, mitochondrial-like [Cucumis sativus]
 gi|449515059|ref|XP_004164567.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g13230, mitochondrial-like [Cucumis sativus]
          Length = 721

 Score =  537 bits (1384), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 281/723 (38%), Positives = 425/723 (58%), Gaps = 4/723 (0%)

Query: 63  LFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLR-KNTALTPDNFTYSFVLSAASAC 121
           +F  +P+ +   F  +I G++ +     +   +  L  +   L P  F ++ VL    + 
Sbjct: 2   VFDEMPERNTVSFVTLIHGYAQSNKFIEAFELFARLHGEGHELNP--FVFTTVLKLLVSM 59

Query: 122 CDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMI 181
               +G ++HG  +  GYGS+ F+G AL+D Y     V  AR+VFD++  KD V W  MI
Sbjct: 60  EWAELGRIVHGCVLKVGYGSNTFIGTALIDAYSVSGCVSMAREVFDEISSKDMVSWTGMI 119

Query: 182 SGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGF 241
           +   +N CF +++  F  M R  G   ++ + A VL A   +Q    G  + C  LK  +
Sbjct: 120 ASYAENDCFSEALEFFSQM-RVAGFKPNNFTFAGVLKACLGLQNFDAGKTVHCSVLKTNY 178

Query: 242 HDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQ 301
              +YV  GL+  Y++CG+ + A   F D+ + D+I  + MIS +  +G++E +L +F Q
Sbjct: 179 ERDLYVGVGLLELYTRCGDNDDAWRAFGDMPKNDVIPWSFMISRFAQSGQSEKALEIFCQ 238

Query: 302 LLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNE 361
           +  +    N  T   ++        L L+  IH   LK+G+ ++  V  AL   Y++   
Sbjct: 239 MRRAFVIPNQFTFSSVLQASADIESLDLSKTIHGHALKAGLSTDVFVSNALMACYAKCGC 298

Query: 362 MEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSA 421
           +E + +LF+  S+++  SWN +I  Y Q G  E A+SLF  M   +V    VT SSIL A
Sbjct: 299 IEQSMELFEALSDRNDVSWNTIIVSYVQLGDGERALSLFSNMLRYQVQATEVTYSSILRA 358

Query: 422 CAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTW 481
           CA L A+ LG  VH L     +  ++ V  ALIDMYAKCG+I +AR +FD++  + +V+W
Sbjct: 359 CATLAALELGLQVHCLTAKTIYGQDVAVGNALIDMYAKCGSIKDARFMFDMLDLRDKVSW 418

Query: 482 NTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIH 541
           N +I GY +HG G+EA+++F+ M  +  +P  +TF+ VL ACS+ G + EG + F SM  
Sbjct: 419 NAIICGYSMHGLGVEAIKMFNLMKETKCKPDELTFVGVLSACSNTGRLDEGKQYFTSMKQ 478

Query: 542 DHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLAR 601
           D+G +P  EHY CMV ++GR+G L++A++FI+ +  EP   +W ALLGAC+IH D  L R
Sbjct: 479 DYGIEPCMEHYTCMVWLMGRSGNLDQAVKFIEDIPFEPSVMIWRALLGACVIHNDVELGR 538

Query: 602 VASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTP 661
           ++++++ EL+P +   HVLLSNIY+  R +   A VR+ +K++ + K PG + IE  G  
Sbjct: 539 ISAQRVLELEPRDEASHVLLSNIYARARRWGNVAYVRKHMKRKGVKKEPGLSWIENQGNV 598

Query: 662 HVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLA 721
           H FT  D  H     I  MLE LN K R+AG+  +    L DVE++EKE ++ +HSE+LA
Sbjct: 599 HCFTVADTSHADLKLINGMLEFLNMKTRKAGYSPQLNAVLLDVEDDEKERLLWLHSERLA 658

Query: 722 IAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCG 781
           +AFGL+    G  IRIIKNLR+C+DCH+  K ISK+ GR I+VRD NRFHHF+ G CSC 
Sbjct: 659 LAFGLVRMPAGCPIRIIKNLRICVDCHSVIKLISKIVGRDIIVRDMNRFHHFENGSCSCA 718

Query: 782 DYW 784
           DYW
Sbjct: 719 DYW 721



 Score =  139 bits (349), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 89/315 (28%), Positives = 147/315 (46%), Gaps = 9/315 (2%)

Query: 266 LLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFG 325
           ++F ++   + +S   +I GY  + K   +  LF +L      +N      ++ +     
Sbjct: 1   MVFDEMPERNTVSFVTLIHGYAQSNKFIEAFELFARLHGEGHELNPFVFTTVLKLLVSME 60

Query: 326 HLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIA 385
              L   +H   LK G  SN+ + TAL   YS    +  AR++FDE S K + SW  MIA
Sbjct: 61  WAELGRIVHGCVLKVGYGSNTFIGTALIDAYSVSGCVSMAREVFDEISSKDMVSWTGMIA 120

Query: 386 GYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFES 445
            Y +N    EA+  F +M+ +   PN  T + +L AC  L     GK VH  V   N+E 
Sbjct: 121 SYAENDCFSEALEFFSQMRVAGFKPNNFTFAGVLKACLGLQNFDAGKTVHCSVLKTNYER 180

Query: 446 NIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEML 505
           ++YV   L+++Y +CG+  +A   F  M     + W+ MIS +   G   +AL++F +M 
Sbjct: 181 DLYVGVGLLELYTRCGDNDDAWRAFGDMPKNDVIPWSFMISRFAQSGQSEKALEIFCQMR 240

Query: 506 HSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDIL----GR 561
            + + P+  TF SVL A +    +   D      IH H  K        + + L     +
Sbjct: 241 RAFVIPNQFTFSSVLQASAD---IESLD--LSKTIHGHALKAGLSTDVFVSNALMACYAK 295

Query: 562 AGQLEKALEFIKGLA 576
            G +E+++E  + L+
Sbjct: 296 CGCIEQSMELFEALS 310


>gi|224126883|ref|XP_002319950.1| predicted protein [Populus trichocarpa]
 gi|222858326|gb|EEE95873.1| predicted protein [Populus trichocarpa]
          Length = 746

 Score =  537 bits (1383), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 287/754 (38%), Positives = 435/754 (57%), Gaps = 22/754 (2%)

Query: 41  LSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRK 100
           L  +T+  +++S F A C  +        P  F F      F       SS+   TH   
Sbjct: 5   LPFLTRPPNKVSSFIALC-PQPFKIRPLDPPPFRFPASTLKFLETHY-SSSLNLTTHFNN 62

Query: 101 N------TALTPDNFTYSFVLSAASACCDRSIGVL----LHGHAIVSGYGSDLFVGAALV 150
           N      +   PD F  S +        D SI       ++   +V+G     F+ A LV
Sbjct: 63  NKDDCNESTFKPDKFYASLI--------DDSIHKTHLNQIYAKLLVTGLQYGGFLIAKLV 114

Query: 151 DLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDS 210
           +       V  ARK+FDK P+ D  LWN+++    ++  F  +I ++  M +      D 
Sbjct: 115 NKASNIGEVSCARKLFDKFPDPDVFLWNAIVRCYSRHGFFGHAIEMYARM-QVACVSPDG 173

Query: 211 TSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRD 270
            S   VL A + +  L +G  +     + GF   V+V  GLV+ Y+KCGE+ RA  +F  
Sbjct: 174 FSFPCVLKACSALPALEMGRRVHGQIFRHGFESDVFVQNGLVALYAKCGEIVRANAVFGR 233

Query: 271 IVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLT 330
           +V   ++S  ++ISGY  NG+   +LR+F ++  +  R +   +V ++  +     L   
Sbjct: 234 LVDRTIVSWTSIISGYAQNGQPIEALRIFSEMRKTNVRPDWIALVSVLRAYTDVEDLEHG 293

Query: 331 NCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQN 390
             IH   +K G+     +L +L+++Y++   +  AR  F++    SL  WNAMI+GY +N
Sbjct: 294 KSIHGCVIKMGLECEFDLLISLTSLYAKCGHVMVARLFFNQVENPSLIFWNAMISGYVKN 353

Query: 391 GLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVS 450
           G  EEAI LF+ M++  + P+ +TV+S ++ACAQ+G++ L +W+ E +    F +++ V+
Sbjct: 354 GYAEEAIELFRLMKSKNIRPDSITVTSSIAACAQIGSLELARWMDEYISMSEFRNDVIVN 413

Query: 451 TALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIR 510
           T+LID YAKCG++  AR +FD +  K  V W+ M+ GYGLHG G E++ LF  M  +G+ 
Sbjct: 414 TSLIDTYAKCGSVDMARFVFDRIPDKDVVVWSAMMVGYGLHGQGRESIILFHAMRQAGVS 473

Query: 511 PSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALE 570
           P+ VTF+ +L AC ++GLV EG ++F  M  D+G +P  +HYAC+VD+LGRAG L++A  
Sbjct: 474 PNDVTFVGLLTACKNSGLVEEGWDLFHRM-RDYGIEPRHQHYACVVDLLGRAGHLDRAYN 532

Query: 571 FIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERD 630
           F+  + +EPG +VWGALL AC IH+   L   A+E+LF LDP N G++V LSN+Y++   
Sbjct: 533 FVMNMPIEPGVSVWGALLSACKIHRHVTLGEYAAERLFSLDPYNTGHYVQLSNLYASSCL 592

Query: 631 YLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMRE 690
           +   A VR +++++ L K  G ++IE+ G    F +GD+ HP+S  I+  +E L  +++E
Sbjct: 593 WDCVAKVRVLMREKGLTKHLGYSVIEINGKLQAFQAGDKTHPRSKEIFEEVEDLERRLKE 652

Query: 691 AGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTA 750
           AGF   T + LHD+  EE E  +  HSE+LAIA+GLI+T PGT +RI KNLR C +CH A
Sbjct: 653 AGFVPHTESVLHDLNYEETEETLCNHSERLAIAYGLISTPPGTTLRITKNLRACDNCHAA 712

Query: 751 TKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
            K ISK+  R IVVRDA RFHHFK G CSCGDYW
Sbjct: 713 IKLISKLVSREIVVRDACRFHHFKDGACSCGDYW 746



 Score =  228 bits (581), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 145/490 (29%), Positives = 241/490 (49%), Gaps = 3/490 (0%)

Query: 5   TPQSRNLFLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALF 64
           T +    + SL+  +  ++ L Q +A++++ G Q     + KL ++ S+      AR LF
Sbjct: 71  TFKPDKFYASLIDDSIHKTHLNQIYAKLLVTGLQYGGFLIAKLVNKASNIGEVSCARKLF 130

Query: 65  FSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDR 124
              P PD+FL+N I+R +S +     +I  Y  ++    ++PD F++  VL A SA    
Sbjct: 131 DKFPDPDVFLWNAIVRCYSRHGFFGHAIEMYARMQV-ACVSPDGFSFPCVLKACSALPAL 189

Query: 125 SIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGL 184
            +G  +HG     G+ SD+FV   LV LY K   +  A  VF ++ ++  V W S+ISG 
Sbjct: 190 EMGRRVHGQIFRHGFESDVFVQNGLVALYAKCGEIVRANAVFGRLVDRTIVSWTSIISGY 249

Query: 185 MKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDH 244
            +N    +++ +F +M R      D  ++ +VL A  +V++L  G  I    +K+G    
Sbjct: 250 AQNGQPIEALRIFSEM-RKTNVRPDWIALVSVLRAYTDVEDLEHGKSIHGCVIKMGLECE 308

Query: 245 VYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLA 304
             +L  L S Y+KCG V  A L F  +  P LI  NAMISGY  NG  E ++ LFR + +
Sbjct: 309 FDLLISLTSLYAKCGHVMVARLFFNQVENPSLIFWNAMISGYVKNGYAEEAIELFRLMKS 368

Query: 305 SAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEA 364
              R +S T+   I      G L L   +  +   S   ++  V T+L   Y++   ++ 
Sbjct: 369 KNIRPDSITVTSSIAACAQIGSLELARWMDEYISMSEFRNDVIVNTSLIDTYAKCGSVDM 428

Query: 365 ARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQ 424
           AR +FD   +K +  W+AM+ GY  +G   E+I LF  M+ + V+PN VT   +L+AC  
Sbjct: 429 ARFVFDRIPDKDVVVWSAMMVGYGLHGQGRESIILFHAMRQAGVSPNDVTFVGLLTACKN 488

Query: 425 LGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVT-WNT 483
            G +  G  +   ++    E        ++D+  + G++  A      M  +  V+ W  
Sbjct: 489 SGLVEEGWDLFHRMRDYGIEPRHQHYACVVDLLGRAGHLDRAYNFVMNMPIEPGVSVWGA 548

Query: 484 MISGYGLHGH 493
           ++S   +H H
Sbjct: 549 LLSACKIHRH 558


>gi|449465002|ref|XP_004150218.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Cucumis sativus]
 gi|449500809|ref|XP_004161200.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Cucumis sativus]
          Length = 926

 Score =  536 bits (1382), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 275/726 (37%), Positives = 429/726 (59%), Gaps = 4/726 (0%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
            R +F  + +  +FL+N++I  +S +     SI  +  + +   + P+++T+S +L   +
Sbjct: 204 GRMVFDKLSESKIFLWNLMISEYSGSGNYGESINLFKQMLE-LGIKPNSYTFSSILKCFA 262

Query: 120 ACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNS 179
           A      G  +HG     G+ S   V  +L+  YF    V+ A+K+FD++ ++D + WNS
Sbjct: 263 AVARVEEGRQVHGLICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELTDRDVISWNS 322

Query: 180 MISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKL 239
           MISG +KN      I +F  M+   G  +D  ++  V  A A +  L LG  +    +K 
Sbjct: 323 MISGYVKNGLDDRGIEIFIKMLV-FGVDIDLATMVNVFVACANIGTLLLGKVLHSYSIKA 381

Query: 240 GFHDH-VYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRL 298
              D  V     L+  YSKCG++  A  +F  +    ++S  +MI+GY   G ++ +++L
Sbjct: 382 ATLDREVRFNNTLLDMYSKCGDLNSAIRVFERMDEKTVVSWTSMITGYVREGLSDGAIKL 441

Query: 299 FRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSR 358
           F ++ +     +   +  ++      G+L     +H +  ++ + +NS V  AL+ +Y++
Sbjct: 442 FDEMKSRGVVPDVYAVTSILNACAINGNLKSGKIVHDYIRENNLETNSFVSNALTDMYAK 501

Query: 359 LNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSI 418
              M+ A  +F    +K + SWN MI GYT+N L  EA++LF EMQ  +  P+  TV+ I
Sbjct: 502 CGSMKDAHDVFSHMKKKDVISWNTMIGGYTKNSLPNEALTLFAEMQ-RESKPDGTTVACI 560

Query: 419 LSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSE 478
           L ACA L A+  G+ +H       +  + YV+ A++DMY KCG +V AR LFD++ +K  
Sbjct: 561 LPACASLAALDKGREIHGYALRNGYSEDKYVTNAVVDMYVKCGLLVLARSLFDMIPNKDL 620

Query: 479 VTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQS 538
           V+W  MI+GYG+HG+G EA+  F++M  +GI P  V+F+S+LYACSH+GL+ EG +IF  
Sbjct: 621 VSWTVMIAGYGMHGYGSEAINTFNQMRMTGIEPDEVSFISILYACSHSGLLDEGWKIFNI 680

Query: 539 MIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTN 598
           M  +   +P  EHYACMVD+L R G L KA +FIK + ++P   +WGALL  C IH D  
Sbjct: 681 MKKECQIEPNLEHYACMVDLLARTGNLVKAHKFIKAMPIKPDATIWGALLCGCRIHHDVK 740

Query: 599 LARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVG 658
           LA   +E++FEL+PEN GY+VLL+NIY+    + +   +R+ + +R L K PGC+ IE+ 
Sbjct: 741 LAEKVAERIFELEPENTGYYVLLANIYAEAEKWEEVQKLRKKIGQRGLKKNPGCSWIEIK 800

Query: 659 GTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSE 718
           G  ++F +GD   PQ+  I  +L++L  KM+E G+  +T  AL + +E EKE+ +  HSE
Sbjct: 801 GKINIFVAGDCSKPQAKKIELLLKRLRSKMKEEGYSPKTAYALLNADEREKEVALCGHSE 860

Query: 719 KLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVC 778
           KLA+AFG++   PG  IR+ KNLRVC DCH   KF+SK   R I++RD++RFHHFK G C
Sbjct: 861 KLAMAFGMLNLPPGKTIRVTKNLRVCGDCHEMAKFMSKSASREIILRDSSRFHHFKDGSC 920

Query: 779 SCGDYW 784
           SC  YW
Sbjct: 921 SCRGYW 926



 Score =  244 bits (622), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 142/400 (35%), Positives = 223/400 (55%), Gaps = 3/400 (0%)

Query: 137 SGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWV 196
           SG   D  +G  LV +Y K   +K  R VFDK+ E    LWN MIS    +  + +SI +
Sbjct: 179 SGVMIDGILGVKLVFMYVKCGDLKEGRMVFDKLSESKIFLWNLMISEYSGSGNYGESINL 238

Query: 197 FGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYS 256
           F  M+   G   +S + +++L   A V  +  G ++  L  KLGF+ +  V+  L+SFY 
Sbjct: 239 FKQMLEL-GIKPNSYTFSSILKCFAAVARVEEGRQVHGLICKLGFNSYNTVVNSLISFYF 297

Query: 257 KCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVG 316
              +V  A+ LF ++   D+IS N+MISGY  NG  +  + +F ++L     ++ +T+V 
Sbjct: 298 VGRKVRCAQKLFDELTDRDVISWNSMISGYVKNGLDDRGIEIFIKMLVFGVDIDLATMVN 357

Query: 317 LIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVL-TALSTVYSRLNEMEAARKLFDESSEK 375
           +       G L L   +HS+ +K+  +         L  +YS+  ++ +A ++F+   EK
Sbjct: 358 VFVACANIGTLLLGKVLHSYSIKAATLDREVRFNNTLLDMYSKCGDLNSAIRVFERMDEK 417

Query: 376 SLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVH 435
           ++ SW +MI GY + GL++ AI LF EM++  V P+   V+SIL+ACA  G +  GK VH
Sbjct: 418 TVVSWTSMITGYVREGLSDGAIKLFDEMKSRGVVPDVYAVTSILNACAINGNLKSGKIVH 477

Query: 436 ELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGL 495
           + ++  N E+N +VS AL DMYAKCG++ +A ++F  M  K  ++WNTMI GY  +    
Sbjct: 478 DYIRENNLETNSFVSNALTDMYAKCGSMKDAHDVFSHMKKKDVISWNTMIGGYTKNSLPN 537

Query: 496 EALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEI 535
           EAL LF+EM     +P G T   +L AC+    + +G EI
Sbjct: 538 EALTLFAEMQRES-KPDGTTVACILPACASLAALDKGREI 576



 Score =  175 bits (444), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 102/362 (28%), Positives = 185/362 (51%), Gaps = 2/362 (0%)

Query: 208 LDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELL 267
            D  +  ++L   AE + +R G  ++ +    G      +   LV  Y KCG+++   ++
Sbjct: 148 FDLGAYCSILQLCAERKSIRDGRRVRSIIESSGVMIDGILGVKLVFMYVKCGDLKEGRMV 207

Query: 268 FRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHL 327
           F  +    +   N MIS Y+ +G    S+ LF+Q+L    + NS T   ++  F     +
Sbjct: 208 FDKLSESKIFLWNLMISEYSGSGNYGESINLFKQMLELGIKPNSYTFSSILKCFAAVARV 267

Query: 328 HLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGY 387
                +H    K G  S ++V+ +L + Y    ++  A+KLFDE +++ + SWN+MI+GY
Sbjct: 268 EEGRQVHGLICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELTDRDVISWNSMISGY 327

Query: 388 TQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHEL-VKSRNFESN 446
            +NGL +  I +F +M    V  +  T+ ++  ACA +G + LGK +H   +K+   +  
Sbjct: 328 VKNGLDDRGIEIFIKMLVFGVDIDLATMVNVFVACANIGTLLLGKVLHSYSIKAATLDRE 387

Query: 447 IYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLH 506
           +  +  L+DMY+KCG++  A  +F+ M  K+ V+W +MI+GY   G    A++LF EM  
Sbjct: 388 VRFNNTLLDMYSKCGDLNSAIRVFERMDEKTVVSWTSMITGYVREGLSDGAIKLFDEMKS 447

Query: 507 SGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLE 566
            G+ P      S+L AC+  G ++ G +I    I ++  +  +     + D+  + G ++
Sbjct: 448 RGVVPDVYAVTSILNACAINGNLKSG-KIVHDYIRENNLETNSFVSNALTDMYAKCGSMK 506

Query: 567 KA 568
            A
Sbjct: 507 DA 508



 Score = 43.9 bits (102), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 43/163 (26%), Positives = 71/163 (43%), Gaps = 19/163 (11%)

Query: 34  IHGF--QNDLSTVTKLAHRLSDFKATC----YARALFFSIPKPDLFLFNVIIRGFSNNEM 87
           IHG+  +N  S    + + + D    C     AR+LF  IP  DL  + V+I G+  +  
Sbjct: 576 IHGYALRNGYSEDKYVTNAVVDMYVKCGLLVLARSLFDMIPNKDLVSWTVMIAGYGMHGY 635

Query: 88  PKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVG- 146
              +I  +  +R  T + PD  ++  +L A    C  S G+L  G  I +    +  +  
Sbjct: 636 GSEAINTFNQMRM-TGIEPDEVSFISILYA----CSHS-GLLDEGWKIFNIMKKECQIEP 689

Query: 147 -----AALVDLYFKFSWVKSARKVFDKMPEK-DTVLWNSMISG 183
                A +VDL  +   +  A K    MP K D  +W +++ G
Sbjct: 690 NLEHYACMVDLLARTGNLVKAHKFIKAMPIKPDATIWGALLCG 732


>gi|356569698|ref|XP_003553033.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Glycine max]
          Length = 824

 Score =  536 bits (1381), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 287/761 (37%), Positives = 443/761 (58%), Gaps = 8/761 (1%)

Query: 27  QTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNE 86
           Q HA +++ G   D+  +T+L    +       +   F  I + ++F +N ++  +    
Sbjct: 69  QLHALLLVLGKAQDVVLLTQLVTLYATLGDLSLSSTTFKHIQRKNIFSWNSMVSAYVRRG 128

Query: 87  MPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVG 146
             + S+   T L   + + PD +T+  VL A   C   + G  +H   +  G+  D++V 
Sbjct: 129 RYRDSMDCVTELLSLSGVRPDFYTFPPVLKA---CLSLADGEKMHCWVLKMGFEHDVYVA 185

Query: 147 AALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGT 206
           A+L+ LY +F  V+ A KVF  MP +D   WN+MISG  +N    +++ V  D ++    
Sbjct: 186 ASLIHLYSRFGAVEVAHKVFVDMPVRDVGSWNAMISGFCQNGNVAEALRVL-DRMKTEEV 244

Query: 207 WLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAEL 266
            +D+ +V+++LP  A+  ++  G+ +    +K G    V+V   L++ YSK G ++ A+ 
Sbjct: 245 KMDTVTVSSMLPICAQSNDVVGGVLVHLYVIKHGLESDVFVSNALINMYSKFGRLQDAQR 304

Query: 267 LFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGH 326
           +F  +   DL+S N++I+ Y  N    ++L  F+++L    R +  T+V L  +F     
Sbjct: 305 VFDGMEVRDLVSWNSIIAAYEQNDDPVTALGFFKEMLFVGMRPDLLTVVSLASIFGQLSD 364

Query: 327 LHLTNCIHSFCLKSGIVSNSSVL-TALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIA 385
             +   +H F ++   +    V+  AL  +Y++L  ++ AR +F++   + + SWN +I 
Sbjct: 365 RRIGRAVHGFVVRCRWLEVDIVIGNALVNMYAKLGSIDCARAVFEQLPSRDVISWNTLIT 424

Query: 386 GYTQNGLTEEAISLFQEMQASK-VAPNPVTVSSILSACAQLGAISLGKWVH-ELVKSRNF 443
           GY QNGL  EAI  +  M+  + + PN  T  SIL A + +GA+  G  +H  L+K+  F
Sbjct: 425 GYAQNGLASEAIDAYNMMEEGRTIVPNQGTWVSILPAYSHVGALQQGMKIHGRLIKNCLF 484

Query: 444 ESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSE 503
             +++V+T LIDMY KCG + +A  LF  +  ++ V WN +IS  G+HGHG +ALQLF +
Sbjct: 485 -LDVFVATCLIDMYGKCGRLEDAMSLFYEIPQETSVPWNAIISSLGIHGHGEKALQLFKD 543

Query: 504 MLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAG 563
           M   G++   +TF+S+L ACSH+GLV E    F +M  ++  KP  +HY CMVD+ GRAG
Sbjct: 544 MRADGVKADHITFVSLLSACSHSGLVDEAQWCFDTMQKEYRIKPNLKHYGCMVDLFGRAG 603

Query: 564 QLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSN 623
            LEKA   +  + ++   ++WG LL AC IH +  L   AS++L E+D ENVGY+VLLSN
Sbjct: 604 YLEKAYNLVSNMPIQADASIWGTLLAACRIHGNAELGTFASDRLLEVDSENVGYYVLLSN 663

Query: 624 IYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEK 683
           IY+    +  A  VR + + R L K PG + + VG    VF +G+Q HPQ   IY  L  
Sbjct: 664 IYANVGKWEGAVKVRSLARDRGLRKTPGWSSVVVGSVVEVFYAGNQSHPQCAEIYEELRV 723

Query: 684 LNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRV 743
           LN KM+  G+  +    L DVEE+EKE ++  HSE+LAI FG+I+T P + IRI KNLRV
Sbjct: 724 LNAKMKSLGYVPDYSFVLQDVEEDEKEEILTSHSERLAIVFGIISTPPKSPIRIFKNLRV 783

Query: 744 CLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           C DCH ATK+ISK+T R I+VRD+NRFHHFK G+CSCGDYW
Sbjct: 784 CGDCHNATKYISKITEREIIVRDSNRFHHFKDGICSCGDYW 824



 Score =  224 bits (571), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 142/478 (29%), Positives = 251/478 (52%), Gaps = 9/478 (1%)

Query: 120 ACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNS 179
           +C + ++   LH   +V G   D+ +   LV LY     +  +   F  +  K+   WNS
Sbjct: 60  SCTNINVAKQLHALLLVLGKAQDVVLLTQLVTLYATLGDLSLSSTTFKHIQRKNIFSWNS 119

Query: 180 MISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKL 239
           M+S  ++   ++DS+    +++   G   D  +   VL A   + +   G ++ C  LK+
Sbjct: 120 MVSAYVRRGRYRDSMDCVTELLSLSGVRPDFYTFPPVLKACLSLAD---GEKMHCWVLKM 176

Query: 240 GFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLF 299
           GF   VYV   L+  YS+ G VE A  +F D+   D+ S NAMISG+  NG    +LR+ 
Sbjct: 177 GFEHDVYVAASLIHLYSRFGAVEVAHKVFVDMPVRDVGSWNAMISGFCQNGNVAEALRVL 236

Query: 300 RQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRL 359
            ++     ++++ T+  ++P+      +     +H + +K G+ S+  V  AL  +YS+ 
Sbjct: 237 DRMKTEEVKMDTVTVSSMLPICAQSNDVVGGVLVHLYVIKHGLESDVFVSNALINMYSKF 296

Query: 360 NEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSIL 419
             ++ A+++FD    + L SWN++IA Y QN     A+  F+EM    + P+ +TV S+ 
Sbjct: 297 GRLQDAQRVFDGMEVRDLVSWNSIIAAYEQNDDPVTALGFFKEMLFVGMRPDLLTVVSLA 356

Query: 420 SACAQLGAISLGKWVHE-LVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSE 478
           S   QL    +G+ VH  +V+ R  E +I +  AL++MYAK G+I  AR +F+ +  +  
Sbjct: 357 SIFGQLSDRRIGRAVHGFVVRCRWLEVDIVIGNALVNMYAKLGSIDCARAVFEQLPSRDV 416

Query: 479 VTWNTMISGYGLHGHGLEALQLFSEMLHSG--IRPSGVTFLSVLYACSHAGLVREGDEIF 536
           ++WNT+I+GY  +G   EA+  ++ M+  G  I P+  T++S+L A SH G +++G +I 
Sbjct: 417 ISWNTLITGYAQNGLASEAIDAYN-MMEEGRTIVPNQGTWVSILPAYSHVGALQQGMKIH 475

Query: 537 QSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIH 594
             +I +  F  +     C++D+ G+ G+LE A+     +  E     W A++ +  IH
Sbjct: 476 GRLIKNCLFLDVFVA-TCLIDMYGKCGRLEDAMSLFYEIPQETS-VPWNAIISSLGIH 531



 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 127/487 (26%), Positives = 239/487 (49%), Gaps = 6/487 (1%)

Query: 12  FLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPD 71
           F  +LK   + +   + H  ++  GF++D+     L H  S F A   A  +F  +P  D
Sbjct: 153 FPPVLKACLSLADGEKMHCWVLKMGFEHDVYVAASLIHLYSRFGAVEVAHKVFVDMPVRD 212

Query: 72  LFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLH 131
           +  +N +I GF  N     ++     + K   +  D  T S +L   +   D   GVL+H
Sbjct: 213 VGSWNAMISGFCQNGNVAEALRVLDRM-KTEEVKMDTVTVSSMLPICAQSNDVVGGVLVH 271

Query: 132 GHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQ 191
            + I  G  SD+FV  AL+++Y KF  ++ A++VFD M  +D V WNS+I+   +N    
Sbjct: 272 LYVIKHGLESDVFVSNALINMYSKFGRLQDAQRVFDGMEVRDLVSWNSIIAAYEQNDDPV 331

Query: 192 DSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHD-HVYVLTG 250
            ++  F +M+  G    D  +V ++     ++ + R+G  +    ++  + +  + +   
Sbjct: 332 TALGFFKEMLFVGMR-PDLLTVVSLASIFGQLSDRRIGRAVHGFVVRCRWLEVDIVIGNA 390

Query: 251 LVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERV- 309
           LV+ Y+K G ++ A  +F  +   D+IS N +I+GY  NG    ++  +  +      V 
Sbjct: 391 LVNMYAKLGSIDCARAVFEQLPSRDVISWNTLITGYAQNGLASEAIDAYNMMEEGRTIVP 450

Query: 310 NSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLF 369
           N  T V ++P +   G L     IH   +K+ +  +  V T L  +Y +   +E A  LF
Sbjct: 451 NQGTWVSILPAYSHVGALQQGMKIHGRLIKNCLFLDVFVATCLIDMYGKCGRLEDAMSLF 510

Query: 370 DESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAIS 429
            E  +++   WNA+I+    +G  E+A+ LF++M+A  V  + +T  S+LSAC+  G + 
Sbjct: 511 YEIPQETSVPWNAIISSLGIHGHGEKALQLFKDMRADGVKADHITFVSLLSACSHSGLVD 570

Query: 430 LGKWVHE-LVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVT-WNTMISG 487
             +W  + + K    + N+     ++D++ + G + +A  L   M  +++ + W T+++ 
Sbjct: 571 EAQWCFDTMQKEYRIKPNLKHYGCMVDLFGRAGYLEKAYNLVSNMPIQADASIWGTLLAA 630

Query: 488 YGLHGHG 494
             +HG+ 
Sbjct: 631 CRIHGNA 637



 Score =  102 bits (255), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 70/272 (25%), Positives = 134/272 (49%), Gaps = 6/272 (2%)

Query: 320 VFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLAS 379
           VF    ++++   +H+  L  G   +  +LT L T+Y+ L ++  +   F     K++ S
Sbjct: 57  VFRSCTNINVAKQLHALLLVLGKAQDVVLLTQLVTLYATLGDLSLSSTTFKHIQRKNIFS 116

Query: 380 WNAMIAGYTQNGLTEEAISLFQEMQA-SKVAPNPVTVSSILSACAQLGAISLGKWVHELV 438
           WN+M++ Y + G   +++    E+ + S V P+  T   +L AC  L     G+ +H  V
Sbjct: 117 WNSMVSAYVRRGRYRDSMDCVTELLSLSGVRPDFYTFPPVLKACLSLAD---GEKMHCWV 173

Query: 439 KSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEAL 498
               FE ++YV+ +LI +Y++ G +  A ++F  M  +   +WN MISG+  +G+  EAL
Sbjct: 174 LKMGFEHDVYVAASLIHLYSRFGAVEVAHKVFVDMPVRDVGSWNAMISGFCQNGNVAEAL 233

Query: 499 QLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDI 558
           ++   M    ++   VT  S+L  C+ +  V  G  +   +I  HG +        ++++
Sbjct: 234 RVLDRMKTEEVKMDTVTVSSMLPICAQSNDVVGGVLVHLYVIK-HGLESDVFVSNALINM 292

Query: 559 LGRAGQLEKALEFIKGLAVEPGPAVWGALLGA 590
             + G+L+ A     G+ V      W +++ A
Sbjct: 293 YSKFGRLQDAQRVFDGMEVR-DLVSWNSIIAA 323


>gi|108708629|gb|ABF96424.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
 gi|125586550|gb|EAZ27214.1| hypothetical protein OsJ_11153 [Oryza sativa Japonica Group]
          Length = 748

 Score =  535 bits (1378), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 281/683 (41%), Positives = 409/683 (59%), Gaps = 9/683 (1%)

Query: 107 DNFTYSFVLSAASACCDRSIGVLLHGHAIVSGY-GSDLFVGAALVDLYFKFSWVKSARKV 165
           D FT+  +L AA           LH  A+  G    D F   ALV  Y +F  V+ A + 
Sbjct: 70  DAFTFPPLLRAAQG---PGTAAQLHACALRLGLLRGDAFASGALVHAYLRFGRVRDAYRA 126

Query: 166 FDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQE 225
           FD+M  +D   WN+M+SGL +N    +++ +FG MV  G    D+ +V++VLP    + +
Sbjct: 127 FDEMRHRDVPAWNAMLSGLCRNARAAEAVGLFGRMVMEGVAG-DAVTVSSVLPMCVLLGD 185

Query: 226 LRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISG 285
             L + +    +K G  D ++V   ++  Y K G +E    +F  +   DL++ N++ISG
Sbjct: 186 RALALAMHLYAVKHGLDDELFVCNAMIDVYGKLGMLEEVRKVFDGMSSRDLVTWNSIISG 245

Query: 286 YTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGI-VS 344
           +   G+  S++ +F  +  S    +  T++ L       G +     +H + ++ G  V 
Sbjct: 246 HEQGGQVASAVEMFCGMRDSGVSPDVLTLLSLASAIAQCGDICGGRSVHCYMVRRGWDVG 305

Query: 345 NSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQ 404
           +     A+  +Y++L+++EAA+++FD    +   SWN +I GY QNGL  EAI ++  MQ
Sbjct: 306 DIIAGNAIVDMYAKLSKIEAAQRMFDSMPVRDAVSWNTLITGYMQNGLASEAIHVYDHMQ 365

Query: 405 ASK-VAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNI 463
             + + P   T  S+L A + LGA+  G  +H L        ++YV T +ID+YAKCG +
Sbjct: 366 KHEGLKPIQGTFVSVLPAYSHLGALQQGTRMHALSIKTGLNLDVYVGTCVIDLYAKCGKL 425

Query: 464 VEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYAC 523
            EA  LF+    +S   WN +ISG G+HGHG +AL LFS+M   GI P  VTF+S+L AC
Sbjct: 426 DEAMLLFEQTPRRSTGPWNAVISGVGVHGHGAKALSLFSQMQQEGISPDHVTFVSLLAAC 485

Query: 524 SHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAV 583
           SHAGLV +G   F  M   +G KP+A+HYACMVD+ GRAGQL+ A +FI+ + ++P  A+
Sbjct: 486 SHAGLVDQGRNFFNMMQTAYGIKPIAKHYACMVDMFGRAGQLDDAFDFIRNMPIKPDSAI 545

Query: 584 WGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKK 643
           WGALLGAC IH +  + +VAS+ LFELDP+NVGY+VL+SN+Y+    +     VR +V++
Sbjct: 546 WGALLGACRIHGNVEMGKVASQNLFELDPKNVGYYVLMSNMYAKVGKWDGVDEVRSLVRR 605

Query: 644 RKLAKAPGCTLIEVGGTPHVFTSGDQL--HPQSTAIYAMLEKLNGKMREAGFQTETVTAL 701
           + L K PG + IEV  + +VF SG+Q+  HPQ   I   L  L  K+R  G+  +    L
Sbjct: 606 QNLQKTPGWSSIEVKRSVNVFYSGNQMNIHPQHEEIQRELLDLLAKIRSLGYVPDYSFVL 665

Query: 702 HDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRV 761
            DVEE+EKE ++  HSE+LAIAFG+I T P T + I KNLRVC DCH ATK+ISK+T R 
Sbjct: 666 QDVEEDEKEQILNNHSERLAIAFGIINTPPRTPLHIYKNLRVCGDCHNATKYISKITERE 725

Query: 762 IVVRDANRFHHFKGGVCSCGDYW 784
           I+VRD+NRFHHFK G CSCGD+W
Sbjct: 726 IIVRDSNRFHHFKDGYCSCGDFW 748



 Score = 79.7 bits (195), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 60/254 (23%), Positives = 117/254 (46%), Gaps = 6/254 (2%)

Query: 42  STVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKN 101
           + +  +  +LS  +A   A+ +F S+P  D   +N +I G+  N +   +I  Y H++K+
Sbjct: 311 NAIVDMYAKLSKIEA---AQRMFDSMPVRDAVSWNTLITGYMQNGLASEAIHVYDHMQKH 367

Query: 102 TALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKS 161
             L P   T+  VL A S       G  +H  +I +G   D++VG  ++DLY K   +  
Sbjct: 368 EGLKPIQGTFVSVLPAYSHLGALQQGTRMHALSIKTGLNLDVYVGTCVIDLYAKCGKLDE 427

Query: 162 ARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVA 221
           A  +F++ P + T  WN++ISG+  +     ++ +F  M + G +  D  +  ++L A +
Sbjct: 428 AMLLFEQTPRRSTGPWNAVISGVGVHGHGAKALSLFSQMQQEGIS-PDHVTFVSLLAACS 486

Query: 222 EVQELRLGME-IQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDI-VRPDLISC 279
               +  G      +    G          +V  + + G+++ A    R++ ++PD    
Sbjct: 487 HAGLVDQGRNFFNMMQTAYGIKPIAKHYACMVDMFGRAGQLDDAFDFIRNMPIKPDSAIW 546

Query: 280 NAMISGYTCNGKTE 293
            A++     +G  E
Sbjct: 547 GALLGACRIHGNVE 560


>gi|147805537|emb|CAN74095.1| hypothetical protein VITISV_023708 [Vitis vinifera]
          Length = 906

 Score =  535 bits (1377), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 291/776 (37%), Positives = 439/776 (56%), Gaps = 32/776 (4%)

Query: 12  FLSLLKGAKTQSQL---TQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIP 68
           F S+LK       L    Q H  +++ GF+ D+     L    +       ++ LF  IP
Sbjct: 160 FSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIP 219

Query: 69  KPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGV 128
           + ++  +N +   +   +    ++  +  +   + + P+ F+ S +++A +   D S G 
Sbjct: 220 ERNVVSWNALFSCYVQXDFCGEAVGLFYEMVL-SGIKPNEFSLSSMVNACTGLRDSSRGK 278

Query: 129 LLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNC 188
           ++HG+ I  GY  D F   ALVD+Y K   +  A  VF+K+ + D V WN++I+G + + 
Sbjct: 279 IIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHE 338

Query: 189 CFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVL 248
             + ++ + G M R   + L                            +K+     ++V 
Sbjct: 339 HHEQALELLGQMKRQLHSSL----------------------------MKMDMESDLFVS 370

Query: 249 TGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAER 308
            GLV  YSKC  +E A + F  +   DLI+ NA+ISGY+   +   +L LF ++      
Sbjct: 371 VGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIG 430

Query: 309 VNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKL 368
            N +T+  ++        +H+   +H   +KSG  S+  V+ +L   Y + + +E A ++
Sbjct: 431 FNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERI 490

Query: 369 FDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAI 428
           F+E +   L S+ +MI  Y Q G  EEA+ LF EMQ  ++ P+    SS+L+ACA L A 
Sbjct: 491 FEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACANLSAF 550

Query: 429 SLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGY 488
             GK +H  +    F  +I+   +L++MYAKCG+I +A   F  ++ +  V+W+ MI G 
Sbjct: 551 EQGKQLHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSELTERGIVSWSAMIGGL 610

Query: 489 GLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPL 548
             HGHG +ALQLF++ML  G+ P+ +T +SVL AC+HAGLV E    F+SM    GFKP+
Sbjct: 611 AQHGHGRQALQLFNQMLKEGVSPNHITLVSVLGACNHAGLVTEAKLYFESMEELFGFKPM 670

Query: 549 AEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLF 608
            EHYACM+D+LGRAG++ +A+E +  +  E   +VWGALLGA  IHKD  L R A+E LF
Sbjct: 671 QEHYACMIDLLGRAGKINEAVELVNKMPFEANASVWGALLGAARIHKDVELGRRAAEMLF 730

Query: 609 ELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGD 668
            L+PE  G HVLL+NIY++   +   A VR++++  K+ K PG + IEV    + F  GD
Sbjct: 731 ILEPEKSGTHVLLANIYASAGKWENVAEVRRLMRDSKVKKEPGMSWIEVKDKVYTFLVGD 790

Query: 669 QLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIA 728
           + H +S  IYA L++L+  M +AG+       LHDVE+ EKEL++  HSEKLA+AFGLIA
Sbjct: 791 RSHYRSQEIYAKLDELSDLMDKAGYVPMVEIDLHDVEQSEKELLLYHHSEKLAVAFGLIA 850

Query: 729 TEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           T  G  IR+ KNLRVC+DCHTA K+I K+  R I+VRD NRFHHFK G CSCGDYW
Sbjct: 851 TPQGAPIRVKKNLRVCVDCHTAFKYICKIVSREIIVRDINRFHHFKDGSCSCGDYW 906



 Score =  233 bits (594), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 163/568 (28%), Positives = 280/568 (49%), Gaps = 31/568 (5%)

Query: 27  QTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNE 86
           Q HA I   G  +D S    L +  S  +   YAR L     +PDL  ++ +I G++ N 
Sbjct: 77  QIHAHITKSGLSDDPSIRNHLINLYSKCRXFGYARKLVDESSEPDLVSWSALISGYAQNG 136

Query: 87  MPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVG 146
           +   ++  + H      +  + FT+S VL A S   D  IG  +HG  +VSG+  D+FV 
Sbjct: 137 LGGGALMAF-HEMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFVA 195

Query: 147 AALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGT 206
             LV +Y K      ++++FD++PE++ V WN++ S  ++     +++ +F +MV +G  
Sbjct: 196 NTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQXDFCGEAVGLFYEMVLSG-I 254

Query: 207 WLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAEL 266
             +  S+++++ A   +++   G  I    +KLG+    +    LV  Y+K G++  A  
Sbjct: 255 KPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAIS 314

Query: 267 LFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGH 326
           +F  I +PD++S NA+I+G   +   E +L L  Q+                        
Sbjct: 315 VFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQM------------------------ 350

Query: 327 LHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAG 386
                 +HS  +K  + S+  V   L  +YS+ + +E AR  F+   EK L +WNA+I+G
Sbjct: 351 ---KRQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISG 407

Query: 387 YTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESN 446
           Y+Q     EA+SLF EM    +  N  T+S+IL + A L  + + + VH L     F S+
Sbjct: 408 YSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSD 467

Query: 447 IYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLH 506
           IYV  +LID Y KC ++ +A  +F+  +    V++ +MI+ Y  +G G EAL+LF EM  
Sbjct: 468 IYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQD 527

Query: 507 SGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLE 566
             ++P      S+L AC++     +G ++   ++  +GF         +V++  + G ++
Sbjct: 528 MELKPDRFVCSSLLNACANLSAFEQGKQLHVHIL-KYGFVLDIFAGNSLVNMYAKCGSID 586

Query: 567 KALEFIKGLAVEPGPAVWGALLGACMIH 594
            A      L  E G   W A++G    H
Sbjct: 587 DAGRAFSEL-TERGIVSWSAMIGGLAQH 613



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 137/523 (26%), Positives = 243/523 (46%), Gaps = 65/523 (12%)

Query: 104 LTPDNFTYSFVLSAASACCDRSI--GVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKS 161
            TP + +YS +LS    C  +S+  G+ +H H   SG   D  +   L++LY K      
Sbjct: 52  FTPTSVSYSKLLS--QCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRXFGY 109

Query: 162 ARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVA 221
           ARK+ D+  E D V W+++ISG  +N     ++  F +M    G   +  + ++VL A +
Sbjct: 110 ARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEM-HLLGVKCNEFTFSSVLKACS 168

Query: 222 EVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNA 281
            V++LR+G ++  + +  GF   V+V   LV  Y+KC E   ++ LF +I   +++S NA
Sbjct: 169 IVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNA 228

Query: 282 MISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSG 341
           + S Y        ++ LF +++ S  + N  ++  ++              IH + +K G
Sbjct: 229 LFSCYVQXDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLG 288

Query: 342 IVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQ 401
              +     AL  +Y+++ ++  A  +F++  +  + SWNA+IAG   +   E+A+ L  
Sbjct: 289 YDWDPFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLG 348

Query: 402 EMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCG 461
           +M+                           + +H  +   + ES+++VS  L+DMY+KC 
Sbjct: 349 QMK---------------------------RQLHSSLMKMDMESDLFVSVGLVDMYSKCD 381

Query: 462 NIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTF----- 516
            + +AR  F+L+  K  + WN +ISGY  +   +EAL LF EM   GI  +  T      
Sbjct: 382 LLEDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILK 441

Query: 517 ----LSVLYACS--HAGLVREG--DEIF--QSMIHDHGFKPLAEH--------------- 551
               L V++ C   H   V+ G   +I+   S+I  +G     E                
Sbjct: 442 STAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVS 501

Query: 552 YACMVDILGRAGQLEKALEF---IKGLAVEPGPAVWGALLGAC 591
           +  M+    + GQ E+AL+    ++ + ++P   V  +LL AC
Sbjct: 502 FTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNAC 544



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 95/314 (30%), Positives = 160/314 (50%), Gaps = 3/314 (0%)

Query: 199 DMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKC 258
           +++  G     S S + +L      + LR G++I     K G  D   +   L++ YSKC
Sbjct: 45  NLIDKGNFTPTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKC 104

Query: 259 GEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLI 318
                A  L  +   PDL+S +A+ISGY  NG    +L  F ++     + N  T   ++
Sbjct: 105 RXFGYARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVL 164

Query: 319 PVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLA 378
                   L +   +H   + SG   +  V   L  +Y++ +E   +++LFDE  E+++ 
Sbjct: 165 KACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVV 224

Query: 379 SWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELV 438
           SWNA+ + Y Q     EA+ LF EM  S + PN  ++SS+++AC  L   S GK +H  +
Sbjct: 225 SWNALFSCYVQXDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYL 284

Query: 439 KSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEAL 498
               ++ + + + AL+DMYAK G++ +A  +F+ +     V+WN +I+G  LH H  +AL
Sbjct: 285 IKLGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQAL 344

Query: 499 QLFSEM---LHSGI 509
           +L  +M   LHS +
Sbjct: 345 ELLGQMKRQLHSSL 358



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 90/264 (34%), Positives = 145/264 (54%), Gaps = 4/264 (1%)

Query: 333 IHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGL 392
           IH+   KSG+  + S+   L  +YS+      ARKL DESSE  L SW+A+I+GY QNGL
Sbjct: 78  IHAHITKSGLSDDPSIRNHLINLYSKCRXFGYARKLVDESSEPDLVSWSALISGYAQNGL 137

Query: 393 TEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTA 452
              A+  F EM    V  N  T SS+L AC+ +  + +GK VH +V    FE +++V+  
Sbjct: 138 GGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFVANT 197

Query: 453 LIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPS 512
           L+ MYAKC   ++++ LFD +  ++ V+WN + S Y       EA+ LF EM+ SGI+P+
Sbjct: 198 LVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQXDFCGEAVGLFYEMVLSGIKPN 257

Query: 513 GVTFLSVLYACSHAGLVREGDEIFQSMIH-DHGFKPLAEHYACMVDILGRAGQLEKALEF 571
             +  S++ AC+       G  I   +I   + + P + +   +VD+  + G L  A+  
Sbjct: 258 EFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSAN--ALVDMYAKVGDLADAISV 315

Query: 572 IKGLAVEPGPAVWGALLGACMIHK 595
            + +  +P    W A++  C++H+
Sbjct: 316 FEKIK-QPDIVSWNAVIAGCVLHE 338


>gi|359488559|ref|XP_002275581.2| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
           mitochondrial-like [Vitis vinifera]
          Length = 735

 Score =  534 bits (1376), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 265/630 (42%), Positives = 396/630 (62%), Gaps = 11/630 (1%)

Query: 165 VFDKMPEKDTVL-WNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEV 223
           +F+K  +K  V  WNS+I+ L ++    +++  F  M R      + ++    + + + +
Sbjct: 107 LFNKYVDKTNVFSWNSVIAELARSGDSVEALRAFSSM-RKLSLKPNRSTFPCAIKSCSAL 165

Query: 224 QELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMI 283
            +L  G +     L  GF   ++V + LV  YSKCGE+  A  LF +I   +++S  +MI
Sbjct: 166 LDLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMI 225

Query: 284 SGYTCNGKTESSLRLFRQLLASAER--------VNSSTIVGLIPVFYPFGHLHLTNCIHS 335
           +GY  N     +L LF++ L             V+   +V ++          +T  +H 
Sbjct: 226 TGYVQNDDAHRALLLFKEFLVEESGSEGDGEVCVDPIAMVSVLSACSRVSEKSITEGVHG 285

Query: 336 FCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEE 395
           F +K G   +  V   L   Y++  E+  +R++FD  +E+ + SWN++IA Y QNG++ E
Sbjct: 286 FLIKRGFEGDLGVENTLMDAYAKCGELGVSRRVFDGMAERDVISWNSIIAVYAQNGMSTE 345

Query: 396 AISLFQEM-QASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALI 454
           ++ +F  M +  ++  N VT+S++L ACA  G+  LGK +H+ V     ESN++V T++I
Sbjct: 346 SMEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSII 405

Query: 455 DMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGV 514
           DMY KCG +  AR+ FD M  K+  +W+ M++GYG+HGH  EAL++F EM  +G++P+ +
Sbjct: 406 DMYCKCGKVEMARKAFDRMREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYI 465

Query: 515 TFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKG 574
           TF+SVL ACSHAGL+ EG   F++M H+   +P  EHY CMVD+LGRAG L++A + IKG
Sbjct: 466 TFVSVLAACSHAGLLEEGWHWFKAMSHEFDVEPGVEHYGCMVDLLGRAGYLKEAFDLIKG 525

Query: 575 LAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQA 634
           + + P   VWGALLGAC +HK+ +L  +++ KLFELDP+N GY+VLLSNIY+    +   
Sbjct: 526 MKLRPDFVVWGALLGACRMHKNVDLGEISARKLFELDPKNCGYYVLLSNIYADAGRWEDV 585

Query: 635 ATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQ 694
             +R ++K   L K PG +L+++ G  HVF  GD+ HPQ   IY  LEKL+ K++E G+ 
Sbjct: 586 ERMRILMKNSGLVKPPGFSLVDIKGRVHVFLVGDREHPQHEKIYEYLEKLSMKLQEVGYV 645

Query: 695 TETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFI 754
            +  + LHDV  EEKE++++VHSEKLA+AFG++ T PGT I IIKNLRVC DCHTA KFI
Sbjct: 646 PDMTSVLHDVGHEEKEMVLRVHSEKLAVAFGIMNTVPGTTIHIIKNLRVCGDCHTAIKFI 705

Query: 755 SKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           SK+  R IVVRD+ RFHHF+ G+CSCGDYW
Sbjct: 706 SKIVDREIVVRDSKRFHHFRDGLCSCGDYW 735



 Score =  202 bits (513), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 123/435 (28%), Positives = 226/435 (51%), Gaps = 11/435 (2%)

Query: 67  IPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSI 126
           + K ++F +N +I   + +     ++  ++ +RK  +L P+  T+   + + SA  D   
Sbjct: 112 VDKTNVFSWNSVIAELARSGDSVEALRAFSSMRK-LSLKPNRSTFPCAIKSCSALLDLHS 170

Query: 127 GVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMK 186
           G   H  A++ G+  DLFV +ALVD+Y K   ++ AR +FD++  ++ V W SMI+G ++
Sbjct: 171 GRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMITGYVQ 230

Query: 187 NCCFQDSIWVFGDMV-------RNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKL 239
           N     ++ +F + +        +G   +D  ++ +VL A + V E  +   +    +K 
Sbjct: 231 NDDAHRALLLFKEFLVEESGSEGDGEVCVDPIAMVSVLSACSRVSEKSITEGVHGFLIKR 290

Query: 240 GFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLF 299
           GF   + V   L+  Y+KCGE+  +  +F  +   D+IS N++I+ Y  NG +  S+ +F
Sbjct: 291 GFEGDLGVENTLMDAYAKCGELGVSRRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIF 350

Query: 300 RQLLASAE-RVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSR 358
            +++   E   N+ T+  ++      G   L  CIH   +K G+ SN  V T++  +Y +
Sbjct: 351 HRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCK 410

Query: 359 LNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSI 418
             ++E ARK FD   EK++ SW+AM+AGY  +G  +EA+ +F EM  + V PN +T  S+
Sbjct: 411 CGKVEMARKAFDRMREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSV 470

Query: 419 LSACAQLGAISLG-KWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKS 477
           L+AC+  G +  G  W   +    + E  +     ++D+  + G + EA +L   M  + 
Sbjct: 471 LAACSHAGLLEEGWHWFKAMSHEFDVEPGVEHYGCMVDLLGRAGYLKEAFDLIKGMKLRP 530

Query: 478 E-VTWNTMISGYGLH 491
           + V W  ++    +H
Sbjct: 531 DFVVWGALLGACRMH 545



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 120/459 (26%), Positives = 201/459 (43%), Gaps = 47/459 (10%)

Query: 27  QTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNE 86
           Q H Q +I GF+ DL   + L    S       AR LF  I   ++  +  +I G+  N+
Sbjct: 173 QAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMITGYVQND 232

Query: 87  MPKSSICFYTHL-------RKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGY 139
               ++  +            +  +  D      VLSA S   ++SI   +HG  I  G+
Sbjct: 233 DAHRALLLFKEFLVEESGSEGDGEVCVDPIAMVSVLSACSRVSEKSITEGVHGFLIKRGF 292

Query: 140 GSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGD 199
             DL V   L+D Y K   +  +R+VFD M E+D + WNS+I+   +N    +S+ +F  
Sbjct: 293 EGDLGVENTLMDAYAKCGELGVSRRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHR 352

Query: 200 MVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCG 259
           MV++G    ++ +++AVL A A     RLG  I    +K+G   +V+V T ++  Y KCG
Sbjct: 353 MVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCG 412

Query: 260 EVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIP 319
           +VE A   F  +   ++ S +AM++GY  +G  + +L +F ++  +  + N  T V +  
Sbjct: 413 KVEMARKAFDRMREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSV-- 470

Query: 320 VFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLAS 379
                    L  C H+  L+ G                  +  +A    FD   E  +  
Sbjct: 471 ---------LAACSHAGLLEEG-----------------WHWFKAMSHEFD--VEPGVEH 502

Query: 380 WNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVK 439
           +  M+    + G  +EA  L + M   K+ P+ V   ++L AC     + LG    E+  
Sbjct: 503 YGCMVDLLGRAGYLKEAFDLIKGM---KLRPDFVVWGALLGACRMHKNVDLG----EISA 555

Query: 440 SRNFE---SNIYVSTALIDMYAKCGNIVEARELFDLMSH 475
            + FE    N      L ++YA  G   +   +  LM +
Sbjct: 556 RKLFELDPKNCGYYVLLSNIYADAGRWEDVERMRILMKN 594



 Score = 82.8 bits (203), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 64/266 (24%), Positives = 125/266 (46%), Gaps = 4/266 (1%)

Query: 21  TQSQLTQ-THAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVII 79
           ++  +T+  H  +I  GF+ DL     L    +       +R +F  + + D+  +N II
Sbjct: 275 SEKSITEGVHGFLIKRGFEGDLGVENTLMDAYAKCGELGVSRRVFDGMAERDVISWNSII 334

Query: 80  RGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGY 139
             ++ N M   S+  +  + K+  +  +  T S VL A +    + +G  +H   I  G 
Sbjct: 335 AVYAQNGMSTESMEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGL 394

Query: 140 GSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGD 199
            S++FVG +++D+Y K   V+ ARK FD+M EK+   W++M++G   +   ++++ VF +
Sbjct: 395 ESNVFVGTSIIDMYCKCGKVEMARKAFDRMREKNVKSWSAMVAGYGMHGHAKEALEVFYE 454

Query: 200 MVRNGGTWLDSTSVAAVLPAVAEVQELRLGME-IQCLGLKLGFHDHVYVLTGLVSFYSKC 258
           M    G   +  +  +VL A +    L  G    + +  +      V     +V    + 
Sbjct: 455 M-NMAGVKPNYITFVSVLAACSHAGLLEEGWHWFKAMSHEFDVEPGVEHYGCMVDLLGRA 513

Query: 259 GEVERAELLFRDI-VRPDLISCNAMI 283
           G ++ A  L + + +RPD +   A++
Sbjct: 514 GYLKEAFDLIKGMKLRPDFVVWGALL 539


>gi|449464596|ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
 gi|449529868|ref|XP_004171920.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 734

 Score =  534 bits (1375), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 283/688 (41%), Positives = 410/688 (59%), Gaps = 34/688 (4%)

Query: 130 LHGHAIVSGYGSDLFVGAALVDL--YFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKN 187
           +H H I +G  + LF  + L++     +   +  A  +F+ + E +  +WNSMI GL  +
Sbjct: 48  IHAHIIKTGLHNTLFALSKLIEFSAVSRSGDISYAISLFNSIEEPNLFIWNSMIRGLSMS 107

Query: 188 CCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYV 247
                ++  F  M+ +G    +S +   +L + A++     G +I    LKLGF   V++
Sbjct: 108 LSPALALVFFVRMIYSG-VEPNSYTFPFLLKSCAKLASAHEGKQIHAHVLKLGFVSDVFI 166

Query: 248 LTGLVSFYSKCGEVERAELLF-----RDIVR--------------------------PDL 276
            T L++ Y++ GE+  A+L+F     RD +                            D+
Sbjct: 167 HTSLINMYAQSGEMNNAQLVFDQSNFRDAISFTALIAGYALWGYMDRARQLFDEMPVKDV 226

Query: 277 ISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSF 336
           +S NAMI+GY   G+++ +L LF  +  +    N STIV ++        L L N + S+
Sbjct: 227 VSWNAMIAGYAQMGRSKEALLLFEDMRKANVPPNESTIVSVLSACAQSNALDLGNSMRSW 286

Query: 337 CLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEA 396
               G+ SN  ++ AL  +YS+  +++ AR+LFD+  E+ + SWN MI GYT     +EA
Sbjct: 287 IEDRGLCSNLKLVNALIDMYSKCGDLQTARELFDDMLERDVISWNVMIGGYTHMCSYKEA 346

Query: 397 ISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDM 456
           ++LF+EM AS V P  +T  SIL +CA LGAI LGKW+H  +       +  +ST+LID+
Sbjct: 347 LALFREMLASGVEPTEITFLSILPSCAHLGAIDLGKWIHAYINKNFNSVSTSLSTSLIDL 406

Query: 457 YAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTF 516
           YAKCGNIV AR++FD M  KS  +WN MI G  +HG   +A +LFS+M   GI P+ +TF
Sbjct: 407 YAKCGNIVAARQVFDGMKIKSLASWNAMICGLAMHGQADKAFELFSKMSSDGIEPNEITF 466

Query: 517 LSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLA 576
           + +L AC HAGLV  G + F SM+ D+   P ++HY CM+D+LGRAG  E+A   ++ + 
Sbjct: 467 VGILSACKHAGLVDLGQQFFSSMVQDYKISPKSQHYGCMIDLLGRAGLFEEAESLLQNME 526

Query: 577 VEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAAT 636
           V+P  A+WG+LLGAC  H    L  + +E+LFEL+P+N G +VLLSNIY+    +   A 
Sbjct: 527 VKPDGAIWGSLLGACRDHGRVELGELVAERLFELEPDNPGAYVLLSNIYAGAGKWDDVAR 586

Query: 637 VRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTE 696
           +R  +  R + K PGCT IEV    H F  GD++HPQS  IY MLE+++ +++  GF  +
Sbjct: 587 IRTRLNDRGMKKVPGCTTIEVDNVVHEFLVGDKVHPQSEDIYRMLEEVDEQLKVFGFVAD 646

Query: 697 TVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISK 756
           T   L+D++EE KE  +  HSEKLAIAFGLI+T+PGT IRIIKNLRVC +CH+ATK ISK
Sbjct: 647 TSEVLYDMDEEWKEGALSHHSEKLAIAFGLISTKPGTPIRIIKNLRVCRNCHSATKLISK 706

Query: 757 VTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           +  R I+ RD NRFHHFK G CSC DYW
Sbjct: 707 IFNREIIARDRNRFHHFKDGSCSCNDYW 734



 Score =  232 bits (591), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 159/547 (29%), Positives = 271/547 (49%), Gaps = 40/547 (7%)

Query: 13  LSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAH--RLSDFKATCYARALFFSIPKP 70
           L LL   ++     Q HA II  G  N L  ++KL     +S      YA +LF SI +P
Sbjct: 33  LKLLSKCQSIRTFKQIHAHIIKTGLHNTLFALSKLIEFSAVSRSGDISYAISLFNSIEEP 92

Query: 71  DLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLL 130
           +LF++N +IRG S +  P  ++ F+  +   + + P+++T+ F+L + +       G  +
Sbjct: 93  NLFIWNSMIRGLSMSLSPALALVFFVRMIY-SGVEPNSYTFPFLLKSCAKLASAHEGKQI 151

Query: 131 HGHAIVSGYGSDLFVGAALVDLYFK-------------------------------FSWV 159
           H H +  G+ SD+F+  +L+++Y +                               + ++
Sbjct: 152 HAHVLKLGFVSDVFIHTSLINMYAQSGEMNNAQLVFDQSNFRDAISFTALIAGYALWGYM 211

Query: 160 KSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPA 219
             AR++FD+MP KD V WN+MI+G  +    ++++ +F DM R      + +++ +VL A
Sbjct: 212 DRARQLFDEMPVKDVVSWNAMIAGYAQMGRSKEALLLFEDM-RKANVPPNESTIVSVLSA 270

Query: 220 VAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISC 279
            A+   L LG  ++      G   ++ ++  L+  YSKCG+++ A  LF D++  D+IS 
Sbjct: 271 CAQSNALDLGNSMRSWIEDRGLCSNLKLVNALIDMYSKCGDLQTARELFDDMLERDVISW 330

Query: 280 NAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLK 339
           N MI GYT     + +L LFR++LAS       T + ++P     G + L   IH++  K
Sbjct: 331 NVMIGGYTHMCSYKEALALFREMLASGVEPTEITFLSILPSCAHLGAIDLGKWIHAYINK 390

Query: 340 SGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISL 399
           +    ++S+ T+L  +Y++   + AAR++FD    KSLASWNAMI G   +G  ++A  L
Sbjct: 391 NFNSVSTSLSTSLIDLYAKCGNIVAARQVFDGMKIKSLASWNAMICGLAMHGQADKAFEL 450

Query: 400 FQEMQASKVAPNPVTVSSILSACAQLGAISLG-KWVHELVKSRNFESNIYVSTALIDMYA 458
           F +M +  + PN +T   ILSAC   G + LG ++   +V+             +ID+  
Sbjct: 451 FSKMSSDGIEPNEITFVGILSACKHAGLVDLGQQFFSSMVQDYKISPKSQHYGCMIDLLG 510

Query: 459 KCGNIVEARELFDLMSHKSE-VTWNTMISGYGLHGHGLEALQLFSEMLH--SGIRPSGVT 515
           + G   EA  L   M  K +   W +++     HG  +E  +L +E L       P    
Sbjct: 511 RAGLFEEAESLLQNMEVKPDGAIWGSLLGACRDHGR-VELGELVAERLFELEPDNPGAYV 569

Query: 516 FLSVLYA 522
            LS +YA
Sbjct: 570 LLSNIYA 576



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 132/427 (30%), Positives = 214/427 (50%), Gaps = 42/427 (9%)

Query: 217 LPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSF--YSKCGEVERAELLFRDIVRP 274
           L  +++ Q +R   +I    +K G H+ ++ L+ L+ F   S+ G++  A  LF  I  P
Sbjct: 33  LKLLSKCQSIRTFKQIHAHIIKTGLHNTLFALSKLIEFSAVSRSGDISYAISLFNSIEEP 92

Query: 275 DLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIH 334
           +L   N+MI G + +     +L  F +++ S    NS T   L+         H    IH
Sbjct: 93  NLFIWNSMIRGLSMSLSPALALVFFVRMIYSGVEPNSYTFPFLLKSCAKLASAHEGKQIH 152

Query: 335 SFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAM----------- 383
           +  LK G VS+  + T+L  +Y++  EM  A+ +FD+S+ +   S+ A+           
Sbjct: 153 AHVLKLGFVSDVFIHTSLINMYAQSGEMNNAQLVFDQSNFRDAISFTALIAGYALWGYMD 212

Query: 384 --------------------IAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACA 423
                               IAGY Q G ++EA+ LF++M+ + V PN  T+ S+LSACA
Sbjct: 213 RARQLFDEMPVKDVVSWNAMIAGYAQMGRSKEALLLFEDMRKANVPPNESTIVSVLSACA 272

Query: 424 QLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNT 483
           Q  A+ LG  +   ++ R   SN+ +  ALIDMY+KCG++  ARELFD M  +  ++WN 
Sbjct: 273 QSNALDLGNSMRSWIEDRGLCSNLKLVNALIDMYSKCGDLQTARELFDDMLERDVISWNV 332

Query: 484 MISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDH 543
           MI GY       EAL LF EML SG+ P+ +TFLS+L +C+H G +  G  I  + I+ +
Sbjct: 333 MIGGYTHMCSYKEALALFREMLASGVEPTEITFLSILPSCAHLGAIDLGKWI-HAYINKN 391

Query: 544 GFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVA 603
                      ++D+  + G +  A +   G+ ++   A W A++    +H         
Sbjct: 392 FNSVSTSLSTSLIDLYAKCGNIVAARQVFDGMKIK-SLASWNAMICGLAMHGQ------- 443

Query: 604 SEKLFEL 610
           ++K FEL
Sbjct: 444 ADKAFEL 450


>gi|255541924|ref|XP_002512026.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223549206|gb|EEF50695.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 810

 Score =  533 bits (1373), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 294/769 (38%), Positives = 428/769 (55%), Gaps = 25/769 (3%)

Query: 29  HAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNEMP 88
           H  +I  G   D+     L      F     A  +F  +P  +L  +N II GFS N   
Sbjct: 54  HGMVIKMGLLLDVFVGNALIAMYGKFGFVDAAVKVFHYMPVRNLVSWNSIISGFSENGFS 113

Query: 89  KSSICF---YTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFV 145
           K   CF      +     L PD  T   VL   +   D  +G+ +HG A+  G   D+ V
Sbjct: 114 KD--CFDMLVEMMAGEEGLLPDIATLVTVLPVCAREVDVQMGIRIHGLAVKLGLSEDVRV 171

Query: 146 GAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGG 205
             +LVD+Y K  ++  A+ +FDK   K+ V WN+MI GL       ++  +F +M     
Sbjct: 172 NNSLVDMYSKCGYLTEAQMLFDKNNRKNAVSWNTMIGGLCTKGYIFEAFNLFREMQMQED 231

Query: 206 TWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAE 265
             ++  +V  +LPA  E+ +LR   E+    ++ GF     V  G V+ Y+KCG +  AE
Sbjct: 232 IEVNEVTVLNILPACLEISQLRSLKELHGYSIRHGFQYDELVANGFVAAYAKCGMLICAE 291

Query: 266 LLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFG 325
            +F  +    + S NA+I G   NG    +L L+ Q+          T  GL+P ++  G
Sbjct: 292 RVFYSMETKTVNSWNALIGGCAQNGDPRKALNLYIQM----------TYSGLVPDWFTIG 341

Query: 326 HLHLTNC----------IHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEK 375
            L L +           +H F L+ G+  +S +  +L ++Y    E  +AR LFD   EK
Sbjct: 342 SLLLASAHLKSLRYGKEVHGFVLRHGLEIDSFIGISLLSLYIHCGESSSARLLFDGMEEK 401

Query: 376 SLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVH 435
           S  SWNAMI+GY+QNGL E+A+ LF+++ +    P+ + V S+L AC+Q  A+ LGK  H
Sbjct: 402 SSVSWNAMISGYSQNGLPEDALILFRKLVSDGFQPSDIAVVSVLGACSQQSALRLGKETH 461

Query: 436 ELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGL 495
                     +++V+ + IDMYAK G I E+R +FD + +K   +WN +I+ YG+HG G 
Sbjct: 462 CYALKALLMEDVFVACSTIDMYAKSGCIKESRSVFDGLKNKDLASWNAIIAAYGVHGDGE 521

Query: 496 EALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACM 555
           E+++LF  M   G  P G TF+ +L  CSHAGLV EG + F  M + HG +P  EHYAC+
Sbjct: 522 ESIELFERMRKVGQMPDGFTFIGILTVCSHAGLVEEGLKYFNEMQNFHGIEPKLEHYACV 581

Query: 556 VDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENV 615
           +D+LGRAG+L+ AL  +  +  +P   VW +LL  C    +  + ++ +EKL EL+P+NV
Sbjct: 582 MDMLGRAGRLDDALRLVHEMPEQPDSRVWSSLLSFCRNFGELEIGQIVAEKLLELEPKNV 641

Query: 616 GYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQST 675
             +V LSN+Y+    +     VRQ++K   L K  GC+ IE+GG  H F +GD L PQS 
Sbjct: 642 ENYVSLSNLYAGSGRWDDVRRVRQMIKDIGLQKDAGCSWIELGGKVHSFVAGDNLLPQSK 701

Query: 676 AIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEI 735
            +     KL  KM + G++  T   LHDV+EE+K   ++ HSEKLAI FGL+ T  GT +
Sbjct: 702 EMSMTWRKLEKKMCKIGYKPNTSAVLHDVDEEKKIEKLRGHSEKLAICFGLLNTTKGTTL 761

Query: 736 RIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           RI KNLR+C+DCH A+KF+S+VTGR I++RD  RFHHFK G+CSCGDYW
Sbjct: 762 RIFKNLRICVDCHNASKFMSEVTGREIIIRDNKRFHHFKDGLCSCGDYW 810



 Score =  276 bits (707), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 168/518 (32%), Positives = 265/518 (51%), Gaps = 12/518 (2%)

Query: 85  NEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLF 144
           NE+   +I  +  L  +T    DNFT+  V+ A +   DR +G ++HG  I  G   D+F
Sbjct: 8   NELYSDAIDMFVKLITDTEFNADNFTFPCVIKACTGSLDRGLGEVIHGMVIKMGLLLDVF 67

Query: 145 VGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVR-N 203
           VG AL+ +Y KF +V +A KVF  MP ++ V WNS+ISG  +N   +D   +  +M+   
Sbjct: 68  VGNALIAMYGKFGFVDAAVKVFHYMPVRNLVSWNSIISGFSENGFSKDCFDMLVEMMAGE 127

Query: 204 GGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVER 263
            G   D  ++  VLP  A   ++++G+ I  L +KLG  + V V   LV  YSKCG +  
Sbjct: 128 EGLLPDIATLVTVLPVCAREVDVQMGIRIHGLAVKLGLSEDVRVNNSLVDMYSKCGYLTE 187

Query: 264 AELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAE-RVNSSTIVGLIPVFY 322
           A++LF    R + +S N MI G    G    +  LFR++    +  VN  T++ ++P   
Sbjct: 188 AQMLFDKNNRKNAVSWNTMIGGLCTKGYIFEAFNLFREMQMQEDIEVNEVTVLNILPACL 247

Query: 323 PFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNA 382
               L     +H + ++ G   +  V       Y++   +  A ++F     K++ SWNA
Sbjct: 248 EISQLRSLKELHGYSIRHGFQYDELVANGFVAAYAKCGMLICAERVFYSMETKTVNSWNA 307

Query: 383 MIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRN 442
           +I G  QNG   +A++L+ +M  S + P+  T+ S+L A A L ++  GK VH  V    
Sbjct: 308 LIGGCAQNGDPRKALNLYIQMTYSGLVPDWFTIGSLLLASAHLKSLRYGKEVHGFVLRHG 367

Query: 443 FESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFS 502
            E + ++  +L+ +Y  CG    AR LFD M  KS V+WN MISGY  +G   +AL LF 
Sbjct: 368 LEIDSFIGISLLSLYIHCGESSSARLLFDGMEEKSSVSWNAMISGYSQNGLPEDALILFR 427

Query: 503 EMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEH---YAC-MVDI 558
           +++  G +PS +  +SVL ACS    +R G E      H +  K L       AC  +D+
Sbjct: 428 KLVSDGFQPSDIAVVSVLGACSQQSALRLGKE-----THCYALKALLMEDVFVACSTIDM 482

Query: 559 LGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKD 596
             ++G ++++     GL      A W A++ A  +H D
Sbjct: 483 YAKSGCIKESRSVFDGLK-NKDLASWNAIIAAYGVHGD 519



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 106/363 (29%), Positives = 187/363 (51%), Gaps = 10/363 (2%)

Query: 186 KNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHV 245
           +N  + D+I +F  ++ +     D+ +   V+ A     +  LG  I  + +K+G    V
Sbjct: 7   RNELYSDAIDMFVKLITDTEFNADNFTFPCVIKACTGSLDRGLGEVIHGMVIKMGLLLDV 66

Query: 246 YVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLAS 305
           +V   L++ Y K G V+ A  +F  +   +L+S N++ISG++ NG ++    +  +++A 
Sbjct: 67  FVGNALIAMYGKFGFVDAAVKVFHYMPVRNLVSWNSIISGFSENGFSKDCFDMLVEMMAG 126

Query: 306 AERV--NSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEME 363
            E +  + +T+V ++PV      + +   IH   +K G+  +  V  +L  +YS+   + 
Sbjct: 127 EEGLLPDIATLVTVLPVCAREVDVQMGIRIHGLAVKLGLSEDVRVNNSLVDMYSKCGYLT 186

Query: 364 AARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASK-VAPNPVTVSSILSAC 422
            A+ LFD+++ K+  SWN MI G    G   EA +LF+EMQ  + +  N VTV +IL AC
Sbjct: 187 EAQMLFDKNNRKNAVSWNTMIGGLCTKGYIFEAFNLFREMQMQEDIEVNEVTVLNILPAC 246

Query: 423 AQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWN 482
            ++  +   K +H       F+ +  V+   +  YAKCG ++ A  +F  M  K+  +WN
Sbjct: 247 LEISQLRSLKELHGYSIRHGFQYDELVANGFVAAYAKCGMLICAERVFYSMETKTVNSWN 306

Query: 483 TMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHD 542
            +I G   +G   +AL L+ +M +SG+ P   T  S+L A +H   +R G E+       
Sbjct: 307 ALIGGCAQNGDPRKALNLYIQMTYSGLVPDWFTIGSLLLASAHLKSLRYGKEV------- 359

Query: 543 HGF 545
           HGF
Sbjct: 360 HGF 362


>gi|225464281|ref|XP_002271266.1| PREDICTED: pentatricopeptide repeat-containing protein At3g16610
           [Vitis vinifera]
          Length = 785

 Score =  533 bits (1372), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 303/783 (38%), Positives = 440/783 (56%), Gaps = 8/783 (1%)

Query: 7   QSRNLFLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATC----YARA 62
           + +N +L LL+       LT+   +I  H  +N  +  + + H+L+    +C     AR 
Sbjct: 6   EVKNNYLHLLEACIQSKSLTEA-KKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARR 64

Query: 63  LFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACC 122
           LF  IP P + L+N IIR ++ N     +I  Y H   +  + P+ +TY FVL A S   
Sbjct: 65  LFDEIPNPSVILWNQIIRAYAWNGPFDGAIDLY-HSMLHLGVRPNKYTYPFVLKACSGLL 123

Query: 123 DRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMIS 182
               GV +H HA + G  SD+FV  ALVD Y K   +  A+++F  M  +D V WN+MI+
Sbjct: 124 AIEDGVEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIA 183

Query: 183 GLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFH 242
           G        D++ +   M +  G   +S+++  VLP V E + L  G  +    ++  F 
Sbjct: 184 GCSLYGLCDDAVQLIMQM-QEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFD 242

Query: 243 DHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQL 302
           + V V TGL+  Y+KC  +  A  +F  +   + +S +AMI GY  +   + +L LF Q+
Sbjct: 243 NGVVVGTGLLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVASDCMKEALELFDQM 302

Query: 303 -LASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNE 361
            L  A      T+  ++        L     +H + +K G V +  +   L ++Y++   
Sbjct: 303 ILKDAMDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGSVLDILLGNTLLSMYAKCGV 362

Query: 362 MEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSA 421
           ++ A + FDE + K   S++A+++G  QNG    A+S+F+ MQ S + P+  T+  +L A
Sbjct: 363 IDDAIRFFDEMNPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPA 422

Query: 422 CAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTW 481
           C+ L A+  G   H  +  R F ++  +  ALIDMY+KCG I  ARE+F+ M     V+W
Sbjct: 423 CSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIVSW 482

Query: 482 NTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIH 541
           N MI GYG+HG G+EAL LF ++L  G++P  +TF+ +L +CSH+GLV EG   F +M  
Sbjct: 483 NAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLLSSCSHSGLVMEGRLWFDAMSR 542

Query: 542 DHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLAR 601
           D    P  EH  CMVDILGRAG +++A  FI+ +  EP   +W ALL AC IHK+  L  
Sbjct: 543 DFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSACRIHKNIELGE 602

Query: 602 VASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTP 661
             S+K+  L PE+ G  VLLSNIYSA   +  AA +R   K   L K PGC+ IE+ G  
Sbjct: 603 EVSKKIQSLGPESTGNFVLLSNIYSAAGRWDDAAHIRITQKDWGLKKIPGCSWIEINGIV 662

Query: 662 HVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLA 721
           H F  GDQ H Q + I   LE+L  +M+  G+Q E      DVEEEEKE ++  HSEKLA
Sbjct: 663 HAFVGGDQSHLQLSQINRKLEELLVEMKRLGYQAECSFVFQDVEEEEKEQILLYHSEKLA 722

Query: 722 IAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCG 781
           IAFG++  + G  I + KNLRVC DCHTA KF++ +T R I VRDANRFHHFK G C+CG
Sbjct: 723 IAFGILNLKAGRPILVTKNLRVCGDCHTAIKFMTLITKREITVRDANRFHHFKNGTCNCG 782

Query: 782 DYW 784
           D+W
Sbjct: 783 DFW 785


>gi|356577059|ref|XP_003556647.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Glycine max]
          Length = 821

 Score =  532 bits (1371), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 300/784 (38%), Positives = 449/784 (57%), Gaps = 12/784 (1%)

Query: 7   QSRNLFLSLL-KGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFF 65
           Q+ ++F SLL + + T   +   HAQII +    +     KL    SD     +AR +F 
Sbjct: 44  QAPSVFSSLLHQFSNTLIHVKSIHAQIIKNWVSTESFLAAKLIRVYSDLGFLGHARNVFD 103

Query: 66  SIPKPDLFLFNVIIRGFSNN----EMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASAC 121
               P+  + N +I GF  N    E+P+        +  +  +  +++T  F L A +  
Sbjct: 104 QCSLPETAVCNAMIAGFLRNQQHMEVPR-----LFRMMGSCDIEINSYTCMFALKACTDL 158

Query: 122 CDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMI 181
            D  +G+ +   A+  G+   L+VG+++V+   K  ++  A+KVFD MPEKD V WNS+I
Sbjct: 159 LDDEVGMEIIRAAVRRGFHLHLYVGSSMVNFLVKRGYLADAQKVFDGMPEKDVVCWNSII 218

Query: 182 SGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGF 241
            G ++   F +SI +F +M+  GG      ++A +L A  +    ++GM      L LG 
Sbjct: 219 GGYVQKGLFWESIQMFLEMI-GGGLRPSPVTMANLLKACGQSGLKKVGMCAHSYVLALGM 277

Query: 242 HDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQ 301
            + V+VLT LV  YS  G+   A L+F  +    LIS NAMISGY  NG    S  LFR+
Sbjct: 278 GNDVFVLTSLVDMYSNLGDTGSAALVFDSMCSRSLISWNAMISGYVQNGMIPESYALFRR 337

Query: 302 LLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNE 361
           L+ S    +S T+V LI        L     +HS  ++  + S+  + TA+  +YS+   
Sbjct: 338 LVQSGSGFDSGTLVSLIRGCSQTSDLENGRILHSCIIRKELESHLVLSTAIVDMYSKCGA 397

Query: 362 MEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSA 421
           ++ A  +F    +K++ +W AM+ G +QNG  E+A+ LF +MQ  KVA N VT+ S++  
Sbjct: 398 IKQATIVFGRMGKKNVITWTAMLVGLSQNGYAEDALKLFCQMQEEKVAANSVTLVSLVHC 457

Query: 422 CAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSH-KSEVT 480
           CA LG+++ G+ VH       +  +  +++ALIDMYAKCG I  A +LF+   H K  + 
Sbjct: 458 CAHLGSLTKGRTVHAHFIRHGYAFDAVITSALIDMYAKCGKIHSAEKLFNNEFHLKDVIL 517

Query: 481 WNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMI 540
            N+MI GYG+HGHG  AL ++S M+   ++P+  TF+S+L ACSH+GLV EG  +F SM 
Sbjct: 518 CNSMIMGYGMHGHGRYALGVYSRMIEERLKPNQTTFVSLLTACSHSGLVEEGKALFHSME 577

Query: 541 HDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLA 600
            DH  +P  +HYAC+VD+  RAG+LE+A E +K +  +P   V  ALL  C  HK+TN+ 
Sbjct: 578 RDHDVRPQHKHYACLVDLHSRAGRLEEADELVKQMPFQPSTDVLEALLSGCRTHKNTNMG 637

Query: 601 RVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGT 660
              +++L  LD  N G +V+LSNIY+  R +     +R +++ + + K PG +LIEVG  
Sbjct: 638 IQIADRLISLDYLNSGIYVMLSNIYAEARKWESVNYIRGLMRMQGMKKIPGYSLIEVGNK 697

Query: 661 PHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKL 720
            + F + D  HP    IY +LE L  ++   G+  +T   L DV E  K  ++  HSE+L
Sbjct: 698 VYTFFASDDSHPSWADIYQLLENLRLEVEAEGYIPDTSCVLRDVNEPMKVKLLWGHSERL 757

Query: 721 AIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSC 780
           AIAFGL++T  G+ I+I KNLRVC+DCH  TK+ISK+  R I+VRDANRFHHF  G CSC
Sbjct: 758 AIAFGLLSTPCGSLIKITKNLRVCVDCHNVTKYISKIVQREIIVRDANRFHHFVNGKCSC 817

Query: 781 GDYW 784
            D+W
Sbjct: 818 NDFW 821


>gi|224077074|ref|XP_002305120.1| predicted protein [Populus trichocarpa]
 gi|222848084|gb|EEE85631.1| predicted protein [Populus trichocarpa]
          Length = 786

 Score =  532 bits (1370), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 287/776 (36%), Positives = 447/776 (57%), Gaps = 5/776 (0%)

Query: 12  FLSLLKGAKTQSQLT---QTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIP 68
           F S+LK       L    Q H  +++ GF +D      L    +       AR+LF +IP
Sbjct: 13  FPSVLKACTVTKDLVLGKQVHGIVVVTGFDSDEFVANSLVILYAKCGGFGDARSLFDAIP 72

Query: 69  KPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGV 128
              +  +N +   + +++M   ++  + H    + + P+ F+ S +++  +   D   G 
Sbjct: 73  DRSVVSWNALFSCYVHSDMHGEAVSLF-HDMVLSGIRPNEFSLSSMINVCTGLEDSVQGR 131

Query: 129 LLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNC 188
            +HG+ I  GY SD F   ALVD+Y K   ++ A  VFD++ + D V WN++I+G + + 
Sbjct: 132 KIHGYLIKLGYDSDAFSANALVDMYAKVGILEDASSVFDEIAKPDIVSWNAIIAGCVLHE 191

Query: 189 CFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVL 248
               ++ +  +M ++G    +  ++++ L A A +    LG ++    +K+      ++ 
Sbjct: 192 YHHRALELLREMNKSG-MCPNMFTLSSALKACAGMALRELGRQLHSSLIKMDMGSDSFLG 250

Query: 249 TGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAER 308
            GL+  YSKC  ++ A L+F+ +   D+I+ NA+ISG++ N + E +  LF  +      
Sbjct: 251 VGLIDMYSKCNSMDDARLVFKLMPERDMIAWNAVISGHSQNEEDEEAASLFPLMHTEGIG 310

Query: 309 VNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKL 368
            N +T+  ++         ++   IH+  LKSG   ++ V+ +L   Y +   +E A ++
Sbjct: 311 FNQTTLSTVLKSIAALQANYMCRQIHALSLKSGFEFDNYVVNSLIDTYGKCGHVEDATRV 370

Query: 369 FDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAI 428
           F+ES    L  + +++  Y Q+G  EEA+ L+ EMQ   + P+    SS+L+ACA L A 
Sbjct: 371 FEESPIVDLVLFTSLVTAYAQDGQGEEALRLYLEMQDRGIKPDSFVCSSLLNACASLSAY 430

Query: 429 SLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGY 488
             GK VH  +    F S+I+   +L++MYAKCG+I +A   F  +  +  V+W+ MI G 
Sbjct: 431 EQGKQVHVHILKFGFMSDIFAGNSLVNMYAKCGSIEDASCAFSRIPVRGIVSWSAMIGGL 490

Query: 489 GLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPL 548
             HG+G EALQLF +ML  G+ P+ +T +SVL AC+HAGLV E    F SM    G +P+
Sbjct: 491 AQHGYGKEALQLFKQMLKVGVPPNHITLVSVLCACNHAGLVAEAKHYFNSMKILFGIEPM 550

Query: 549 AEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLF 608
            EHYACM+D+LGRAG+LE A+E +  +  +    VWGALLGA  IHK+ +L   A+E L 
Sbjct: 551 QEHYACMIDLLGRAGKLEAAMELVNKMPFQANALVWGALLGAARIHKNIDLGEQAAEMLL 610

Query: 609 ELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGD 668
            L+PE  G HVLL+NIY++   + + A VR+++K  K+ K PG + +EV    + F  GD
Sbjct: 611 ALEPEKSGTHVLLANIYASVGMWDKVARVRRLMKDGKVKKEPGMSWLEVKDKVYTFIVGD 670

Query: 669 QLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIA 728
           + H +ST IYA L++L+  +++AG+       LHDVE  EKE ++  HSEKLA+AFGLIA
Sbjct: 671 RSHSRSTEIYAKLDELSDLLKKAGYVPMVEIDLHDVERSEKEQLLYHHSEKLAVAFGLIA 730

Query: 729 TEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           T PG  IR+ KNLR+C DCHT  KFISK+  R I+VRD NRFHHF+ G CSCG+YW
Sbjct: 731 TPPGAPIRVKKNLRICFDCHTVLKFISKIVSREIIVRDTNRFHHFREGSCSCGEYW 786



 Score =  220 bits (560), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 143/490 (29%), Positives = 250/490 (51%), Gaps = 7/490 (1%)

Query: 107 DNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVF 166
           + F +  VL A +   D  +G  +HG  +V+G+ SD FV  +LV LY K      AR +F
Sbjct: 9   NEFAFPSVLKACTVTKDLVLGKQVHGIVVVTGFDSDEFVANSLVILYAKCGGFGDARSLF 68

Query: 167 DKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQEL 226
           D +P++  V WN++ S  + +    +++ +F DMV + G   +  S+++++     +++ 
Sbjct: 69  DAIPDRSVVSWNALFSCYVHSDMHGEAVSLFHDMVLS-GIRPNEFSLSSMINVCTGLEDS 127

Query: 227 RLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGY 286
             G +I    +KLG+    +    LV  Y+K G +E A  +F +I +PD++S NA+I+G 
Sbjct: 128 VQGRKIHGYLIKLGYDSDAFSANALVDMYAKVGILEDASSVFDEIAKPDIVSWNAIIAGC 187

Query: 287 TCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNS 346
             +     +L L R++  S    N  T+   +          L   +HS  +K  + S+S
Sbjct: 188 VLHEYHHRALELLREMNKSGMCPNMFTLSSALKACAGMALRELGRQLHSSLIKMDMGSDS 247

Query: 347 SVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQAS 406
            +   L  +YS+ N M+ AR +F    E+ + +WNA+I+G++QN   EEA SLF  M   
Sbjct: 248 FLGVGLIDMYSKCNSMDDARLVFKLMPERDMIAWNAVISGHSQNEEDEEAASLFPLMHTE 307

Query: 407 KVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEA 466
            +  N  T+S++L + A L A  + + +H L     FE + YV  +LID Y KCG++ +A
Sbjct: 308 GIGFNQTTLSTVLKSIAALQANYMCRQIHALSLKSGFEFDNYVVNSLIDTYGKCGHVEDA 367

Query: 467 RELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHA 526
             +F+       V + ++++ Y   G G EAL+L+ EM   GI+P      S+L AC+  
Sbjct: 368 TRVFEESPIVDLVLFTSLVTAYAQDGQGEEALRLYLEMQDRGIKPDSFVCSSLLNACASL 427

Query: 527 GLVREGDEIFQSMIHDHGFKPLAEHYA--CMVDILGRAGQLEKALEFIKGLAVEPGPAVW 584
               +G ++    +H   F  +++ +A   +V++  + G +E A      + V  G   W
Sbjct: 428 SAYEQGKQVH---VHILKFGFMSDIFAGNSLVNMYAKCGSIEDASCAFSRIPVR-GIVSW 483

Query: 585 GALLGACMIH 594
            A++G    H
Sbjct: 484 SAMIGGLAQH 493



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 62/188 (32%), Positives = 100/188 (53%), Gaps = 8/188 (4%)

Query: 411 NPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELF 470
           N     S+L AC     + LGK VH +V    F+S+ +V+ +L+ +YAKCG   +AR LF
Sbjct: 9   NEFAFPSVLKACTVTKDLVLGKQVHGIVVVTGFDSDEFVANSLVILYAKCGGFGDARSLF 68

Query: 471 DLMSHKSEVTWNTMISGY---GLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAG 527
           D +  +S V+WN + S Y    +HG   EA+ LF +M+ SGIRP+  +  S++  C+   
Sbjct: 69  DAIPDRSVVSWNALFSCYVHSDMHG---EAVSLFHDMVLSGIRPNEFSLSSMINVCTGLE 125

Query: 528 LVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGAL 587
              +G +I   +I   G+   A     +VD+  + G LE A      +A +P    W A+
Sbjct: 126 DSVQGRKIHGYLI-KLGYDSDAFSANALVDMYAKVGILEDASSVFDEIA-KPDIVSWNAI 183

Query: 588 LGACMIHK 595
           +  C++H+
Sbjct: 184 IAGCVLHE 191


>gi|356521082|ref|XP_003529187.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g13230, mitochondrial-like [Glycine max]
          Length = 780

 Score =  530 bits (1366), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 297/758 (39%), Positives = 443/758 (58%), Gaps = 5/758 (0%)

Query: 29  HAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFS-NNEM 87
           H  I+ HG   DL     L +    F     A  LF  +P  +   F  + +GFS +++ 
Sbjct: 26  HCHILKHGASLDLFAQNILLNTYVHFGFLEDASKLFDEMPLTNTVSFVTLAQGFSRSHQF 85

Query: 88  PKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGA 147
            ++        R+   +    FT    L  +    D  + V  H +    G+ +D FVG 
Sbjct: 86  QRARRLLLRLFREGYEVNQFVFTTLLKLLVSMDLADTCLSV--HAYVYKLGHQADAFVGT 143

Query: 148 ALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTW 207
           AL+D Y     V +AR+VFD +  KD V W  M++   +N C +DS+ +F  M R  G  
Sbjct: 144 ALIDAYSVCGNVDAARQVFDGIYFKDMVSWTGMVACYAENYCHEDSLLLFCQM-RIMGYR 202

Query: 208 LDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELL 267
            ++ +++A L +   ++  ++G  +    LK+ +   +YV   L+  Y+K GE+  A+  
Sbjct: 203 PNNFTISAALKSCNGLEAFKVGKSVHGCALKVCYDRDLYVGIALLELYTKSGEIAEAQQF 262

Query: 268 FRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERV-NSSTIVGLIPVFYPFGH 326
           F ++ + DLI  + MIS Y  + K++ +L LF ++  S+  V N+ T   ++        
Sbjct: 263 FEEMPKDDLIPWSLMISRYAQSDKSKEALELFCRMRQSSVVVPNNFTFASVLQACASLVL 322

Query: 327 LHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAG 386
           L+L N IHS  LK G+ SN  V  AL  VY++  E+E + KLF  S+EK+  +WN +I G
Sbjct: 323 LNLGNQIHSCVLKVGLDSNVFVSNALMDVYAKCGEIENSVKLFTGSTEKNEVAWNTIIVG 382

Query: 387 YTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESN 446
           Y Q G  E+A++LF  M    + P  VT SS+L A A L A+  G+ +H L     +  +
Sbjct: 383 YVQLGDGEKALNLFSNMLGLDIQPTEVTYSSVLRASASLVALEPGRQIHSLTIKTMYNKD 442

Query: 447 IYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLH 506
             V+ +LIDMYAKCG I +AR  FD M  + EV+WN +I GY +HG G+EAL LF  M  
Sbjct: 443 SVVANSLIDMYAKCGRIDDARLTFDKMDKQDEVSWNALICGYSIHGLGMEALNLFDMMQQ 502

Query: 507 SGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLE 566
           S  +P+ +TF+ VL ACS+AGL+ +G   F+SM+ D+G +P  EHY CMV +LGR+GQ +
Sbjct: 503 SNSKPNKLTFVGVLSACSNAGLLDKGRAHFKSMLQDYGIEPCIEHYTCMVWLLGRSGQFD 562

Query: 567 KALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYS 626
           +A++ I  +  +P   VW ALLGAC+IHK+ +L +V ++++ E++P++   HVLLSN+Y+
Sbjct: 563 EAVKLIGEIPFQPSVMVWRALLGACVIHKNLDLGKVCAQRVLEMEPQDDATHVLLSNMYA 622

Query: 627 AERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNG 686
             + +   A VR+ +KK+K+ K PG + +E  G  H FT GD  HP    I+AMLE L  
Sbjct: 623 TAKRWDNVAYVRKNMKKKKVKKEPGLSWVENQGVVHYFTVGDTSHPNIKLIFAMLEWLYK 682

Query: 687 KMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLD 746
           K R+AG+  +    L DVE++EKE ++ +HSE+LA+AFGLI    G  IRIIKNLR+C+D
Sbjct: 683 KTRDAGYVPDCSVVLLDVEDDEKERLLWMHSERLALAFGLIQIPSGCSIRIIKNLRICVD 742

Query: 747 CHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           CH   K +SK+  R IV+RD NRFHHF+ GVCSCGDYW
Sbjct: 743 CHAVIKLVSKIVQREIVIRDINRFHHFRQGVCSCGDYW 780



 Score =  210 bits (534), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 152/490 (31%), Positives = 244/490 (49%), Gaps = 6/490 (1%)

Query: 107 DNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVF 166
           D+ +Y+ +L  A    D + G  LH H +  G   DLF    L++ Y  F +++ A K+F
Sbjct: 2   DSHSYANMLQQAIRNRDPNAGKSLHCHILKHGASLDLFAQNILLNTYVHFGFLEDASKLF 61

Query: 167 DKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQEL 226
           D+MP  +TV + ++  G  ++  FQ +  +   + R G   ++      +L  +  +   
Sbjct: 62  DEMPLTNTVSFVTLAQGFSRSHQFQRARRLLLRLFREGYE-VNQFVFTTLLKLLVSMDLA 120

Query: 227 RLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGY 286
              + +     KLG     +V T L+  YS CG V+ A  +F  I   D++S   M++ Y
Sbjct: 121 DTCLSVHAYVYKLGHQADAFVGTALIDAYSVCGNVDAARQVFDGIYFKDMVSWTGMVACY 180

Query: 287 TCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNS 346
             N   E SL LF Q+     R N+ TI   +          +   +H   LK     + 
Sbjct: 181 AENYCHEDSLLLFCQMRIMGYRPNNFTISAALKSCNGLEAFKVGKSVHGCALKVCYDRDL 240

Query: 347 SVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEM-QA 405
            V  AL  +Y++  E+  A++ F+E  +  L  W+ MI+ Y Q+  ++EA+ LF  M Q+
Sbjct: 241 YVGIALLELYTKSGEIAEAQQFFEEMPKDDLIPWSLMISRYAQSDKSKEALELFCRMRQS 300

Query: 406 SKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVE 465
           S V PN  T +S+L ACA L  ++LG  +H  V     +SN++VS AL+D+YAKCG I  
Sbjct: 301 SVVVPNNFTFASVLQACASLVLLNLGNQIHSCVLKVGLDSNVFVSNALMDVYAKCGEIEN 360

Query: 466 ARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSH 525
           + +LF   + K+EV WNT+I GY   G G +AL LFS ML   I+P+ VT+ SVL A + 
Sbjct: 361 SVKLFTGSTEKNEVAWNTIIVGYVQLGDGEKALNLFSNMLGLDIQPTEVTYSSVLRASAS 420

Query: 526 AGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKA-LEFIKGLAVEPGPAVW 584
              +  G +I  S+     +   +     ++D+  + G+++ A L F K    +     W
Sbjct: 421 LVALEPGRQI-HSLTIKTMYNKDSVVANSLIDMYAKCGRIDDARLTFDK--MDKQDEVSW 477

Query: 585 GALLGACMIH 594
            AL+    IH
Sbjct: 478 NALICGYSIH 487



 Score =  149 bits (375), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 105/382 (27%), Positives = 183/382 (47%), Gaps = 3/382 (0%)

Query: 208 LDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELL 267
           +DS S A +L      ++   G  + C  LK G    ++    L++ Y   G +E A  L
Sbjct: 1   MDSHSYANMLQQAIRNRDPNAGKSLHCHILKHGASLDLFAQNILLNTYVHFGFLEDASKL 60

Query: 268 FRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHL 327
           F ++   + +S   +  G++ + + + + RL  +L      VN      L+ +       
Sbjct: 61  FDEMPLTNTVSFVTLAQGFSRSHQFQRARRLLLRLFREGYEVNQFVFTTLLKLLVSMDLA 120

Query: 328 HLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGY 387
                +H++  K G  +++ V TAL   YS    ++AAR++FD    K + SW  M+A Y
Sbjct: 121 DTCLSVHAYVYKLGHQADAFVGTALIDAYSVCGNVDAARQVFDGIYFKDMVSWTGMVACY 180

Query: 388 TQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNI 447
            +N   E+++ LF +M+     PN  T+S+ L +C  L A  +GK VH       ++ ++
Sbjct: 181 AENYCHEDSLLLFCQMRIMGYRPNNFTISAALKSCNGLEAFKVGKSVHGCALKVCYDRDL 240

Query: 448 YVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHS 507
           YV  AL+++Y K G I EA++ F+ M     + W+ MIS Y       EAL+LF  M  S
Sbjct: 241 YVGIALLELYTKSGEIAEAQQFFEEMPKDDLIPWSLMISRYAQSDKSKEALELFCRMRQS 300

Query: 508 G-IRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLE 566
             + P+  TF SVL AC+   L+  G++I  S +   G          ++D+  + G++E
Sbjct: 301 SVVVPNNFTFASVLQACASLVLLNLGNQI-HSCVLKVGLDSNVFVSNALMDVYAKCGEIE 359

Query: 567 KALEFIKGLAVEPGPAVWGALL 588
            +++   G + E     W  ++
Sbjct: 360 NSVKLFTG-STEKNEVAWNTII 380


>gi|357509307|ref|XP_003624942.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355499957|gb|AES81160.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1092

 Score =  530 bits (1365), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 289/779 (37%), Positives = 441/779 (56%), Gaps = 25/779 (3%)

Query: 12  FLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPD 71
           F +L       +   + HA +++ G   ++   TKL +          +R+ F  I K +
Sbjct: 25  FNALFNSCVNVNATKKLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIHKKN 84

Query: 72  LFLFNVIIRGFSN-----------NEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASA 120
           +F +N II  +             N++   S+C   HLR      PD +T+  +L A  +
Sbjct: 85  IFSWNSIISAYVRFGKYHEAMNCVNQL--FSMCGGGHLR------PDFYTFPPILKACVS 136

Query: 121 CCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSM 180
             D   G  +H      G+  D+FV A+LV LY ++  +  A KVF  MP KD   WN+M
Sbjct: 137 LVD---GKKVHCCVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAM 193

Query: 181 ISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLG 240
           ISG  +N     ++ V   M +  G  +D+ +VA++LP  A+  ++  G+ I    LK G
Sbjct: 194 ISGFCQNGNAAGALGVLNRM-KGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHG 252

Query: 241 FHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFR 300
               V+V   L++ YSK G ++ A+++F  +   DL+S N++I+ Y  N    ++LR F+
Sbjct: 253 LDSDVFVSNALINMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFK 312

Query: 301 QLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVL-TALSTVYSRL 359
            +     R +  T+V L  +F       ++  I  F ++   +    V+  AL  +Y++L
Sbjct: 313 GMQLGGIRPDLLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVVIGNALVNMYAKL 372

Query: 360 NEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASK-VAPNPVTVSSI 418
             M  A  +FD+   K   SWN ++ GYTQNGL  EAI  +  M+  +   PN  T  SI
Sbjct: 373 GYMNCAHTVFDQLPRKDTISWNTLVTGYTQNGLASEAIDAYNMMEECRDTIPNQGTWVSI 432

Query: 419 LSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSE 478
           + A + +GA+  G  +H  +   +   +++V+T LID+Y KCG + +A  LF  +   + 
Sbjct: 433 IPAYSHVGALQQGMKIHAKLIKNSLYLDVFVATCLIDLYGKCGRLEDAMSLFYEIPRDTS 492

Query: 479 VTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQS 538
           V WN +I+  G+HG G EALQLF +ML   ++   +TF+S+L ACSH+GLV EG + F  
Sbjct: 493 VPWNAIIASLGIHGRGEEALQLFKDMLAERVKADHITFVSLLSACSHSGLVDEGQKCFDI 552

Query: 539 MIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTN 598
           M  ++G KP  +HY CMVD+LGRAG LEKA E ++ + ++P  ++WGALL AC I+ +  
Sbjct: 553 MQKEYGIKPSLKHYGCMVDLLGRAGYLEKAYELVRNMPIQPDASIWGALLSACKIYGNAE 612

Query: 599 LARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVG 658
           L  +AS++L E+D ENVGY+VLLSNIY+    +     VR + + R L K PG + + VG
Sbjct: 613 LGTLASDRLLEVDSENVGYYVLLSNIYANTEKWEGVIKVRSLARDRGLRKTPGWSSVVVG 672

Query: 659 GTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSE 718
               VF +G+Q HP+ T IY  L+ L+ KM+  G+  +      D+EE+EKE ++  HSE
Sbjct: 673 SKAEVFYTGNQTHPKYTEIYKELKVLSAKMKSLGYVPDYSFVYQDIEEDEKEQILNSHSE 732

Query: 719 KLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGV 777
           +LAIAFG+I+T P + IRI KNLRVC DCH ATK+IS+++ R IVVRD+NRFHHFK G+
Sbjct: 733 RLAIAFGIISTPPRSPIRIFKNLRVCGDCHNATKYISRISEREIVVRDSNRFHHFKDGI 791


>gi|357521733|ref|XP_003631155.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355525177|gb|AET05631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 785

 Score =  528 bits (1361), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 274/728 (37%), Positives = 430/728 (59%), Gaps = 5/728 (0%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           AR +F  IPKP + L+N++IR ++ +   + SI  Y H+ +   +TP NFT+ F+L A S
Sbjct: 60  ARHVFDQIPKPSVVLWNMMIRTYAWSGPFQQSIYLYLHMLQ-LGVTPTNFTFPFLLKACS 118

Query: 120 ACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMP--EKDTVLW 177
           +     +G L+H HA + G   DL+V  AL+ +Y K   +  A+ +F+ +   ++D V W
Sbjct: 119 SLQALQLGRLIHTHAHILGLSMDLYVSTALLHMYAKCGHLYQAQTLFNSISHQDRDIVAW 178

Query: 178 NSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGL 237
           N+MI+    +     +I     M + G T  +S+++ ++LP + +   L  G  I    +
Sbjct: 179 NAMIAAFSFHALHAQTIHSVAQMQQAGVT-PNSSTLVSILPTIGQANALHQGKAIHAYYI 237

Query: 238 KLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLR 297
           +  F D+V + T L+  Y+KC  +  A  +F  + + + +  +AMI GY  +     +L 
Sbjct: 238 RNFFFDNVVLQTALLDMYAKCHLLFYARKIFNTVNKKNDVCWSAMIGGYVLHDSISDALA 297

Query: 298 LFRQLLA-SAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVY 356
           L+  +L         +T+  ++        L     +H   +KSG+  +++V  +L ++Y
Sbjct: 298 LYDDMLCIYGLNPTPATLATMLRACAQLTDLKRGKKLHCHMIKSGMDLDTTVGNSLISMY 357

Query: 357 SRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVS 416
           ++   M+ A    DE   K   S++A+I+G  QNG  E+A+ +F++MQ+S +AP   T+ 
Sbjct: 358 AKCGIMDNAVGFLDEMIAKDTVSYSAIISGCVQNGYAEKALLIFRQMQSSGIAPYLETMI 417

Query: 417 SILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHK 476
           ++L AC+ L A+  G   H     R F ++  +  A+IDMY+KCG I  +RE+FD M ++
Sbjct: 418 ALLPACSHLAALQHGTCCHGYTVVRGFTNDTSICNAIIDMYSKCGKITISREIFDRMQNR 477

Query: 477 SEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIF 536
             ++WNTMI GYG+HG  +EAL LF E+   G++P  VT ++VL ACSH+GLV EG   F
Sbjct: 478 DIISWNTMIIGYGIHGLCVEALSLFQELQALGLKPDDVTLIAVLSACSHSGLVTEGKYWF 537

Query: 537 QSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKD 596
            SM  +   KP   HY CMVD+L RAG L++A  FI+ +   P   +WGALL AC  HK+
Sbjct: 538 SSMSQNFNIKPRMAHYICMVDLLARAGNLDEAYTFIQRMPFVPNVRIWGALLAACRTHKN 597

Query: 597 TNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIE 656
             +    S+K+  L PE  G  VL+SNIYS+   +  AA +R + +     K+PGC+ +E
Sbjct: 598 IEMGEQVSKKIQLLGPEGTGNFVLMSNIYSSVGRWDDAAYIRSIQRHHGYKKSPGCSWVE 657

Query: 657 VGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVH 716
           + G  HVF  G Q HPQS +I   L++L  +M++ G++ ++   LHDVEEEEKE ++  H
Sbjct: 658 ISGVIHVFIGGHQSHPQSASINKKLQELLVQMKKLGYRADSSFVLHDVEEEEKEQILLYH 717

Query: 717 SEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGG 776
           SEK+AIAFG++ T P + I + KNLR+C+DCH+A KFI+ +T R I VRDA+RFHHFK G
Sbjct: 718 SEKVAIAFGILNTSPSSRILVTKNLRICVDCHSAIKFITLLTEREITVRDASRFHHFKDG 777

Query: 777 VCSCGDYW 784
           +C+C D+W
Sbjct: 778 ICNCQDFW 785



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 114/462 (24%), Positives = 202/462 (43%), Gaps = 46/462 (9%)

Query: 5   TPQSRNL--FLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARA 62
           TP S  L   L  +  A    Q    HA  I + F +++   T L    +      YAR 
Sbjct: 207 TPNSSTLVSILPTIGQANALHQGKAIHAYYIRNFFFDNVVLQTALLDMYAKCHLLFYARK 266

Query: 63  LFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACC 122
           +F ++ K +   ++ +I G+  ++    ++  Y  +     L P   T + +L A +   
Sbjct: 267 IFNTVNKKNDVCWSAMIGGYVLHDSISDALALYDDMLCIYGLNPTPATLATMLRACAQLT 326

Query: 123 DRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMIS 182
           D   G  LH H I SG   D  VG +L+ +Y K   + +A    D+M  KDTV ++++IS
Sbjct: 327 DLKRGKKLHCHMIKSGMDLDTTVGNSLISMYAKCGIMDNAVGFLDEMIAKDTVSYSAIIS 386

Query: 183 GLMKNCCFQDSIWVFGDMVRNG-GTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGF 241
           G ++N   + ++ +F  M  +G   +L+  ++ A+LPA + +  L+ G       +  GF
Sbjct: 387 GCVQNGYAEKALLIFRQMQSSGIAPYLE--TMIALLPACSHLAALQHGTCCHGYTVVRGF 444

Query: 242 HDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQ 301
            +   +   ++  YSKCG++  +  +F  +   D+IS N MI GY  +G    +L LF++
Sbjct: 445 TNDTSICNAIIDMYSKCGKITISREIFDRMQNRDIISWNTMIIGYGIHGLCVEALSLFQE 504

Query: 302 LLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNE 361
           L A   + +  T++ ++                S C  SG+V+        S++    N 
Sbjct: 505 LQALGLKPDDVTLIAVL----------------SACSHSGLVTEGKYW--FSSMSQNFN- 545

Query: 362 MEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSA 421
                       +  +A +  M+    + G  +EA +  Q M      PN     ++L+A
Sbjct: 546 -----------IKPRMAHYICMVDLLARAGNLDEAYTFIQRM---PFVPNVRIWGALLAA 591

Query: 422 CAQLGAISLGKWVHELVK------SRNF--ESNIYVSTALID 455
           C     I +G+ V + ++      + NF   SNIY S    D
Sbjct: 592 CRTHKNIEMGEQVSKKIQLLGPEGTGNFVLMSNIYSSVGRWD 633


>gi|147790745|emb|CAN61464.1| hypothetical protein VITISV_005683 [Vitis vinifera]
          Length = 785

 Score =  528 bits (1361), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 301/783 (38%), Positives = 438/783 (55%), Gaps = 8/783 (1%)

Query: 7   QSRNLFLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATC----YARA 62
           + +N +L LL+       LT+   +I  H  +N  +  + + H+L+    +C     AR 
Sbjct: 6   EVKNNYLHLLEACIQSKSLTEA-KKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARR 64

Query: 63  LFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACC 122
           LF  IP P + L+N IIR ++ N     +I  Y H   +  + P+ +TY FVL A S   
Sbjct: 65  LFDEIPNPSVILWNQIIRAYAWNGPFDGAIDLY-HSMLHLGVRPNKYTYPFVLKACSGLL 123

Query: 123 DRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMIS 182
               GV +H HA + G  SD+FV  ALVD Y K   +  A+++F  M  +D V WN+MI+
Sbjct: 124 AIEDGVEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIA 183

Query: 183 GLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFH 242
           G        D++ +   M +  G   +S+++  VLP V E + L  G  +    ++  F 
Sbjct: 184 GCSLYGLCDDAVQLIMQM-QEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFD 242

Query: 243 DHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQL 302
           + V V TGL+  Y+KC  +  A  +F  +   + +S +AMI GY  +   + +L LF Q+
Sbjct: 243 NGVVVGTGLLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVXSDCMKEALELFDQM 302

Query: 303 -LASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNE 361
            L  A      T+  ++        L     +H + +K G V +  +   L ++Y++   
Sbjct: 303 ILKDAMDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGXVLDILLGNTLLSMYAKCGV 362

Query: 362 MEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSA 421
           ++ A + FD  + K   S++A+++G  QNG    A+S+F+ MQ S + P+  T+  +L A
Sbjct: 363 IDDAIRFFDXMNPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPA 422

Query: 422 CAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTW 481
           C+ L A+  G   H  +  R F ++  +  ALIDMY+KCG I  ARE+F+ M     V+W
Sbjct: 423 CSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIVSW 482

Query: 482 NTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIH 541
           N MI GYG+HG G+EAL LF ++L  G++P  +TF+ +L +CSH+GLV EG   F +M  
Sbjct: 483 NAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLLSSCSHSGLVMEGRLWFDAMSR 542

Query: 542 DHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLAR 601
           D    P  EH  CMVDILGRAG +++A  FI+ +  EP   +W ALL AC IHK+  L  
Sbjct: 543 DFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSACRIHKNIELGE 602

Query: 602 VASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTP 661
             S+K+  L PE+ G  VLLSNIYSA   +  AA +R   K   L K PGC+ IE+ G  
Sbjct: 603 EVSKKIQSLGPESTGNFVLLSNIYSAAGRWDDAAHIRITQKDWGLKKIPGCSWIEINGIV 662

Query: 662 HVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLA 721
           H F  GDQ H Q + I   LE+L  +M+  G+Q E      DVEEEEKE ++  HSEKLA
Sbjct: 663 HAFVGGDQSHLQLSQINRKLEELLVEMKRLGYQAECSFVFQDVEEEEKEQILLYHSEKLA 722

Query: 722 IAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCG 781
           IAFG++  + G  I + KNLRVC DCH A KF++ +T R I VRDANRFHHFK G C+CG
Sbjct: 723 IAFGILNLKAGRPILVTKNLRVCGDCHAAIKFMTVITKREITVRDANRFHHFKNGTCNCG 782

Query: 782 DYW 784
           D+W
Sbjct: 783 DFW 785


>gi|297834086|ref|XP_002884925.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297330765|gb|EFH61184.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 694

 Score =  528 bits (1361), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 267/700 (38%), Positives = 412/700 (58%), Gaps = 8/700 (1%)

Query: 87  MPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVG 146
           M ++S      L  N+ +  D+F  S + S+      R I    H   +V G     F+ 
Sbjct: 1   MSEASCLASPFLYTNSGIHSDSFYASLIDSSTHKAQLRQI----HARLLVLGLQFSGFLI 56

Query: 147 AALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGT 206
             L+     +  +  AR+VFD +P      WN++I G  +N  FQD++ ++  M +    
Sbjct: 57  TKLIHASSSYGDITFARQVFDDLPRPQVFPWNAIIRGYSRNNHFQDALLMYSKM-QLARV 115

Query: 207 WLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAEL 266
             DS +   +L A   +  L++G  +     +LGF   V+V  GL++ Y+KC  +  A  
Sbjct: 116 SPDSFTFPHLLKACGGLSHLQMGRFVHAQVFRLGFEADVFVQNGLIALYAKCRRLGCART 175

Query: 267 LFRDIVRPD--LISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPF 324
           +F  +  P+  ++S  A++S Y  NG+   +L +F Q+     + +   +V ++  F   
Sbjct: 176 VFEGLPLPERTIVSWTAIVSAYAQNGEPVEALEIFSQMRKMDVKPDCVALVSVLNAFTCL 235

Query: 325 GHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMI 384
             L     IH+  +K G+ +   +L +L+T+Y++  ++  A+ LFD+    +L  WNAMI
Sbjct: 236 QDLEQGRSIHASVMKMGLETEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMI 295

Query: 385 AGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFE 444
           +GY +NG  ++AI LF EM    V P+ ++++S +SACAQ+G++   +W+ E V   ++ 
Sbjct: 296 SGYAKNGFAKDAIDLFHEMINKDVRPDTISITSAISACAQVGSLEQARWMDEYVSRSDYR 355

Query: 445 SNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEM 504
            ++++S+ALIDM+AKCG++  AR +FD    +  V W+ MI GYGLHG   EA+ L+  M
Sbjct: 356 DDVFISSALIDMFAKCGSVECARSVFDRTLDRDVVVWSAMIVGYGLHGQAREAISLYRAM 415

Query: 505 LHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQ 564
              G+ P+ VTFL +L AC+H+G+VREG   F  M  DH   P  +HYAC++D+LGRAG 
Sbjct: 416 ERDGVHPNDVTFLGLLIACNHSGMVREGWWFFNRMA-DHKINPQQQHYACIIDLLGRAGH 474

Query: 565 LEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNI 624
           L++A E IK + V+PG  VWGALL AC  H+   L + A+++LF +DP N G++V LSN+
Sbjct: 475 LDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGKYAAQQLFSIDPSNTGHYVQLSNL 534

Query: 625 YSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKL 684
           Y+A R + + A VR  +K++ L K  GC+ +EV G    F  GD+ HP+   I   +E +
Sbjct: 535 YAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEGFRVGDKSHPRYEEIERQVEWI 594

Query: 685 NGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVC 744
             +++E GF      +LHD+ +EE E  +  HSE++ IA+GLI+T  GT +RI KNLR C
Sbjct: 595 ESRLKEGGFVANKDASLHDLNDEEAEETLCSHSERITIAYGLISTPQGTTLRITKNLRAC 654

Query: 745 LDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           ++CH ATK ISK+ GR IVVRD NRFHHFK GVCSCGDYW
Sbjct: 655 VNCHAATKLISKLVGREIVVRDTNRFHHFKDGVCSCGDYW 694



 Score =  241 bits (615), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 154/528 (29%), Positives = 261/528 (49%), Gaps = 18/528 (3%)

Query: 7   QSRNLFLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFS 66
            S + + SL+  +  ++QL Q HA++++ G Q     +TKL H  S +    +AR +F  
Sbjct: 19  HSDSFYASLIDSSTHKAQLRQIHARLLVLGLQFSGFLITKLIHASSSYGDITFARQVFDD 78

Query: 67  IPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSI 126
           +P+P +F +N IIRG+S N   + ++  Y+ ++    ++PD+FT+  +L A        +
Sbjct: 79  LPRPQVFPWNAIIRGYSRNNHFQDALLMYSKMQL-ARVSPDSFTFPHLLKACGGLSHLQM 137

Query: 127 GVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFD--KMPEKDTVLWNSMISGL 184
           G  +H      G+ +D+FV   L+ LY K   +  AR VF+   +PE+  V W +++S  
Sbjct: 138 GRFVHAQVFRLGFEADVFVQNGLIALYAKCRRLGCARTVFEGLPLPERTIVSWTAIVSAY 197

Query: 185 MKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDH 244
            +N    +++ +F  M R      D  ++ +VL A   +Q+L  G  I    +K+G    
Sbjct: 198 AQNGEPVEALEIFSQM-RKMDVKPDCVALVSVLNAFTCLQDLEQGRSIHASVMKMGLETE 256

Query: 245 VYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLA 304
             +L  L + Y+KCG+V  A++LF  +  P+LI  NAMISGY  NG  + ++ LF +++ 
Sbjct: 257 PDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGFAKDAIDLFHEMIN 316

Query: 305 SAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEA 364
              R ++ +I   I      G L     +  +  +S    +  + +AL  ++++   +E 
Sbjct: 317 KDVRPDTISITSAISACAQVGSLEQARWMDEYVSRSDYRDDVFISSALIDMFAKCGSVEC 376

Query: 365 ARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQ 424
           AR +FD + ++ +  W+AMI GY  +G   EAISL++ M+   V PN VT   +L AC  
Sbjct: 377 ARSVFDRTLDRDVVVWSAMIVGYGLHGQAREAISLYRAMERDGVHPNDVTFLGLLIACNH 436

Query: 425 LGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVT-WNT 483
            G +  G W    +              +ID+  + G++ +A E+   M  +  VT W  
Sbjct: 437 SGMVREGWWFFNRMADHKINPQQQHYACIIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGA 496

Query: 484 MISGYGLHGH----GLEALQLFSEMLHSGIRPSGVTF---LSVLYACS 524
           ++S    H H       A QLFS      I PS       LS LYA +
Sbjct: 497 LLSACKKHRHVELGKYAAQQLFS------IDPSNTGHYVQLSNLYAAA 538


>gi|168068035|ref|XP_001785902.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162662428|gb|EDQ49285.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 908

 Score =  528 bits (1361), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 290/765 (37%), Positives = 435/765 (56%), Gaps = 11/765 (1%)

Query: 25  LTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSN 84
           + + H+  +  G   DL     L H  +   +   AR +F  + + D+F + V+I G + 
Sbjct: 150 VKEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFDGMVERDIFSWTVMIGGLAQ 209

Query: 85  NEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVL-----LHGHAIVSGY 139
           +   + +   +  + +   L P+  TY  +L+A++     S G L     +H HA  +G+
Sbjct: 210 HGRGQEAFSLFLQMERGGCL-PNLTTYLSILNASAIT---STGALEWVKEVHKHAGKAGF 265

Query: 140 GSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGD 199
            SDL VG AL+ +Y K   +  AR VFD M ++D + WN+MI GL +N C  ++  +F  
Sbjct: 266 ISDLRVGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMIGGLAQNGCGHEAFTIFLK 325

Query: 200 MVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCG 259
           M + G    DST+  ++L             E+    +++G    + V +  V  Y +CG
Sbjct: 326 MQQEGFV-PDSTTYLSLLNTHVSTGAWEWVKEVHKHAVEVGLVSDLRVGSAFVHMYIRCG 384

Query: 260 EVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIP 319
            ++ A+L+F  +   ++ + NAMI G         +L LF Q+       +++T V ++ 
Sbjct: 385 SIDDAQLIFDKLAVRNVTTWNAMIGGVAQQKCGREALSLFLQMRREGFFPDATTFVNILS 444

Query: 320 VFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLAS 379
                  L     +HS+ + +G+V +  V  AL  +Y++      A+++FD+  E+++ +
Sbjct: 445 ANVGEEALEWVKEVHSYAIDAGLV-DLRVGNALVHMYAKCGNTMYAKQVFDDMVERNVTT 503

Query: 380 WNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVK 439
           W  MI+G  Q+G   EA SLF +M    + P+  T  SILSACA  GA+   K VH    
Sbjct: 504 WTVMISGLAQHGCGHEAFSLFLQMLREGIVPDATTYVSILSACASTGALEWVKEVHSHAV 563

Query: 440 SRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQ 499
           +    S++ V  AL+ MYAKCG++ +AR +FD M  +   +W  MI G   HG GL+AL 
Sbjct: 564 NAGLVSDLRVGNALVHMYAKCGSVDDARRVFDDMLERDVYSWTVMIGGLAQHGRGLDALD 623

Query: 500 LFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDIL 559
           LF +M   G +P+G +F++VL ACSHAGLV EG   F S+  D+G +P  EHY CMVD+L
Sbjct: 624 LFVKMKLEGFKPNGYSFVAVLSACSHAGLVDEGRRQFLSLTQDYGIEPTMEHYTCMVDLL 683

Query: 560 GRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHV 619
           GRAGQLE+A  FI  + +EPG A WGALLGAC+ + +  +A  A+++  +L P++   +V
Sbjct: 684 GRAGQLEEAKHFILNMPIEPGDAPWGALLGACVTYGNLEMAEFAAKERLKLKPKSASTYV 743

Query: 620 LLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYA 679
           LLSNIY+A  ++ Q   VR ++++R + K PG + IEV    H F  GD  HP+S  IYA
Sbjct: 744 LLSNIYAATGNWEQKLLVRSMMQRRGIRKEPGRSWIEVDNQIHSFVVGDTSHPESKEIYA 803

Query: 680 MLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIK 739
            L+ L  +++  G+  +T   L + ++E KE  +  HSEKLAI +GL+ T     IR+ K
Sbjct: 804 KLKDLIKRLKAEGYVPDTRLVLRNTDQEYKEQALCSHSEKLAIVYGLMHTPYRNPIRVYK 863

Query: 740 NLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           NLRVC DCHTATKFISKVTGR IV RDA RFHHFK GVCSCGDYW
Sbjct: 864 NLRVCSDCHTATKFISKVTGREIVARDAKRFHHFKDGVCSCGDYW 908



 Score =  244 bits (623), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 162/529 (30%), Positives = 265/529 (50%), Gaps = 8/529 (1%)

Query: 12  FLSLLKGAKTQSQLT---QTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIP 68
           +LS+LK   +   L    + HA II  GFQ+D+   T L +      +   A+ +F  + 
Sbjct: 33  YLSILKACCSPVSLKWGKKIHAHIIQSGFQSDVRVETALVNMYVKCGSIDDAQLIFDKMV 92

Query: 69  KPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGV 128
           + ++  + V+I G ++    + +   +  +++     P+++TY  +L+A ++        
Sbjct: 93  ERNVISWTVMIGGLAHYGRGQEAFHRFLQMQRE-GFIPNSYTYVSILNANASAGALEWVK 151

Query: 129 LLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNC 188
            +H HA+ +G   DL VG ALV +Y K   +  AR VFD M E+D   W  MI GL ++ 
Sbjct: 152 EVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFDGMVERDIFSWTVMIGGLAQHG 211

Query: 189 CFQDSIWVFGDMVRNGGTWLDSTSVAAVL--PAVAEVQELRLGMEIQCLGLKLGFHDHVY 246
             Q++  +F  M R GG   + T+  ++L   A+     L    E+     K GF   + 
Sbjct: 212 RGQEAFSLFLQMER-GGCLPNLTTYLSILNASAITSTGALEWVKEVHKHAGKAGFISDLR 270

Query: 247 VLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASA 306
           V   L+  Y+KCG ++ A L+F  +   D+IS NAMI G   NG    +  +F ++    
Sbjct: 271 VGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMIGGLAQNGCGHEAFTIFLKMQQEG 330

Query: 307 ERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAAR 366
              +S+T + L+      G       +H   ++ G+VS+  V +A   +Y R   ++ A+
Sbjct: 331 FVPDSTTYLSLLNTHVSTGAWEWVKEVHKHAVEVGLVSDLRVGSAFVHMYIRCGSIDDAQ 390

Query: 367 KLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLG 426
            +FD+ + +++ +WNAMI G  Q     EA+SLF +M+     P+  T  +ILSA     
Sbjct: 391 LIFDKLAVRNVTTWNAMIGGVAQQKCGREALSLFLQMRREGFFPDATTFVNILSANVGEE 450

Query: 427 AISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMIS 486
           A+   K VH          ++ V  AL+ MYAKCGN + A+++FD M  ++  TW  MIS
Sbjct: 451 ALEWVKEVHSYAIDAGL-VDLRVGNALVHMYAKCGNTMYAKQVFDDMVERNVTTWTVMIS 509

Query: 487 GYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEI 535
           G   HG G EA  LF +ML  GI P   T++S+L AC+  G +    E+
Sbjct: 510 GLAQHGCGHEAFSLFLQMLREGIVPDATTYVSILSACASTGALEWVKEV 558



 Score =  213 bits (543), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 134/447 (29%), Positives = 219/447 (48%), Gaps = 4/447 (0%)

Query: 78  IIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVS 137
           +I G++     + ++  Y+ +R+     P+  TY  +L A  +      G  +H H I S
Sbjct: 1   MIGGYAEYGYAEDAMKVYSQMRREGG-QPNEITYLSILKACCSPVSLKWGKKIHAHIIQS 59

Query: 138 GYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVF 197
           G+ SD+ V  ALV++Y K   +  A+ +FDKM E++ + W  MI GL      Q++   F
Sbjct: 60  GFQSDVRVETALVNMYVKCGSIDDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHRF 119

Query: 198 GDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSK 257
             M R G    +S +  ++L A A    L    E+    +  G    + V   LV  Y+K
Sbjct: 120 LQMQREGFI-PNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAK 178

Query: 258 CGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGL 317
            G ++ A ++F  +V  D+ S   MI G   +G+ + +  LF Q+       N +T + +
Sbjct: 179 SGSIDDARVVFDGMVERDIFSWTVMIGGLAQHGRGQEAFSLFLQMERGGCLPNLTTYLSI 238

Query: 318 I--PVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEK 375
           +        G L     +H    K+G +S+  V  AL  +Y++   ++ AR +FD   ++
Sbjct: 239 LNASAITSTGALEWVKEVHKHAGKAGFISDLRVGNALIHMYAKCGSIDDARLVFDGMCDR 298

Query: 376 SLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVH 435
            + SWNAMI G  QNG   EA ++F +MQ     P+  T  S+L+     GA    K VH
Sbjct: 299 DVISWNAMIGGLAQNGCGHEAFTIFLKMQQEGFVPDSTTYLSLLNTHVSTGAWEWVKEVH 358

Query: 436 ELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGL 495
           +        S++ V +A + MY +CG+I +A+ +FD ++ ++  TWN MI G      G 
Sbjct: 359 KHAVEVGLVSDLRVGSAFVHMYIRCGSIDDAQLIFDKLAVRNVTTWNAMIGGVAQQKCGR 418

Query: 496 EALQLFSEMLHSGIRPSGVTFLSVLYA 522
           EAL LF +M   G  P   TF+++L A
Sbjct: 419 EALSLFLQMRREGFFPDATTFVNILSA 445



 Score =  189 bits (480), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 130/418 (31%), Positives = 200/418 (47%), Gaps = 5/418 (1%)

Query: 180 MISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKL 239
           MI G  +    +D++ V+  M R GG   +  +  ++L A      L+ G +I    ++ 
Sbjct: 1   MIGGYAEYGYAEDAMKVYSQMRREGGQ-PNEITYLSILKACCSPVSLKWGKKIHAHIIQS 59

Query: 240 GFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLF 299
           GF   V V T LV+ Y KCG ++ A+L+F  +V  ++IS   MI G    G+ + +   F
Sbjct: 60  GFQSDVRVETALVNMYVKCGSIDDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHRF 119

Query: 300 RQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRL 359
            Q+       NS T V ++      G L     +HS  + +G+  +  V  AL  +Y++ 
Sbjct: 120 LQMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKS 179

Query: 360 NEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSIL 419
             ++ AR +FD   E+ + SW  MI G  Q+G  +EA SLF +M+     PN  T  SIL
Sbjct: 180 GSIDDARVVFDGMVERDIFSWTVMIGGLAQHGRGQEAFSLFLQMERGGCLPNLTTYLSIL 239

Query: 420 SACA--QLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKS 477
           +A A    GA+   K VH+      F S++ V  ALI MYAKCG+I +AR +FD M  + 
Sbjct: 240 NASAITSTGALEWVKEVHKHAGKAGFISDLRVGNALIHMYAKCGSIDDARLVFDGMCDRD 299

Query: 478 EVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQ 537
            ++WN MI G   +G G EA  +F +M   G  P   T+LS+L      G      E+ +
Sbjct: 300 VISWNAMIGGLAQNGCGHEAFTIFLKMQQEGFVPDSTTYLSLLNTHVSTGAWEWVKEVHK 359

Query: 538 SMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHK 595
             + + G        +  V +  R G ++ A      LAV      W A++G     K
Sbjct: 360 HAV-EVGLVSDLRVGSAFVHMYIRCGSIDDAQLIFDKLAVR-NVTTWNAMIGGVAQQK 415


>gi|334185551|ref|NP_001189950.1| uncharacterized protein [Arabidopsis thaliana]
 gi|75274240|sp|Q9LUJ2.1|PP249_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g22690
 gi|9279687|dbj|BAB01244.1| unnamed protein product [Arabidopsis thaliana]
 gi|332643145|gb|AEE76666.1| uncharacterized protein [Arabidopsis thaliana]
          Length = 842

 Score =  528 bits (1361), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 283/807 (35%), Positives = 456/807 (56%), Gaps = 37/807 (4%)

Query: 14  SLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHR---LSDFKATCYARALF-FSIPK 69
           S LK  KT  +L   H  +   G  ND+ST+TKL  R   L   ++  +A+ +F  S   
Sbjct: 37  SSLKNCKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESY 96

Query: 70  PDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVL 129
              F++N +IRG++++ +   +I  +  +  N+ ++PD +T+ F LSA +    +  G+ 
Sbjct: 97  GTCFMYNSLIRGYASSGLCNEAILLFLRM-MNSGISPDKYTFPFGLSACAKSRAKGNGIQ 155

Query: 130 LHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCC 189
           +HG  +  GY  DLFV  +LV  Y +   + SARKVFD+M E++ V W SMI G  +   
Sbjct: 156 IHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDF 215

Query: 190 FQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLT 249
            +D++ +F  MVR+     +S ++  V+ A A++++L  G ++       G   +  +++
Sbjct: 216 AKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVS 275

Query: 250 GLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERV 309
            LV  Y KC  ++ A+ LF +    +L  CNAM S Y   G T  +L +F  ++ S  R 
Sbjct: 276 ALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRP 335

Query: 310 NSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLF 369
           +  +++  I       ++      H + L++G  S  ++  AL  +Y + +  + A ++F
Sbjct: 336 DRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIF 395

Query: 370 DESSEKSLASWNAMIAGYTQNG-------------------------------LTEEAIS 398
           D  S K++ +WN+++AGY +NG                               L EEAI 
Sbjct: 396 DRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIE 455

Query: 399 LFQEMQASK-VAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMY 457
           +F  MQ+ + V  + VT+ SI SAC  LGA+ L KW++  ++    + ++ + T L+DM+
Sbjct: 456 VFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMF 515

Query: 458 AKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFL 517
           ++CG+   A  +F+ ++++    W   I    + G+   A++LF +M+  G++P GV F+
Sbjct: 516 SRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFV 575

Query: 518 SVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAV 577
             L ACSH GLV++G EIF SM+  HG  P   HY CMVD+LGRAG LE+A++ I+ + +
Sbjct: 576 GALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPM 635

Query: 578 EPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATV 637
           EP   +W +LL AC +  +  +A  A+EK+  L PE  G +VLLSN+Y++   +   A V
Sbjct: 636 EPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKV 695

Query: 638 RQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTET 697
           R  +K++ L K PG + I++ G  H FTSGD+ HP+   I AML++++ +    G   + 
Sbjct: 696 RLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHLGHVPDL 755

Query: 698 VTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKV 757
              L DV+E+EK  M+  HSEKLA+A+GLI++  GT IRI+KNLRVC DCH+  KF SKV
Sbjct: 756 SNVLMDVDEKEKIFMLSRHSEKLAMAYGLISSNKGTTIRIVKNLRVCSDCHSFAKFASKV 815

Query: 758 TGRVIVVRDANRFHHFKGGVCSCGDYW 784
             R I++RD NRFH+ + G CSCGD+W
Sbjct: 816 YNREIILRDNNRFHYIRQGKCSCGDFW 842



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 108/515 (20%), Positives = 233/515 (45%), Gaps = 35/515 (6%)

Query: 13  LSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDL 72
           LS    ++ +    Q H  I+  G+  DL     L H  ++      AR +F  + + ++
Sbjct: 141 LSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNV 200

Query: 73  FLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHG 132
             +  +I G++  +  K ++  +  + ++  +TP++ T   V+SA +   D   G  ++ 
Sbjct: 201 VSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYA 260

Query: 133 HAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQD 192
               SG   +  + +ALVD+Y K + +  A+++FD+    +  L N+M S  ++    ++
Sbjct: 261 FIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTRE 320

Query: 193 SIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLV 252
           ++ VF +++ + G   D  S+ + + + ++++ +  G       L+ GF     +   L+
Sbjct: 321 ALGVF-NLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALI 379

Query: 253 SFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQL---------- 302
             Y KC   + A  +F  +    +++ N++++GY  NG+ +++   F  +          
Sbjct: 380 DMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNT 439

Query: 303 --------------------LASAERVNSS--TIVGLIPVFYPFGHLHLTNCIHSFCLKS 340
                               + S E VN+   T++ +       G L L   I+ +  K+
Sbjct: 440 IISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKN 499

Query: 341 GIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLF 400
           GI  +  + T L  ++SR  + E+A  +F+  + + +++W A I      G  E AI LF
Sbjct: 500 GIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELF 559

Query: 401 QEMQASKVAPNPVTVSSILSACAQLGAISLGKWV-HELVKSRNFESNIYVSTALIDMYAK 459
            +M    + P+ V     L+AC+  G +  GK + + ++K             ++D+  +
Sbjct: 560 DDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGR 619

Query: 460 CGNIVEARELF-DLMSHKSEVTWNTMISGYGLHGH 493
            G + EA +L  D+    ++V WN++++   + G+
Sbjct: 620 AGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGN 654


>gi|356567218|ref|XP_003551818.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g12770-like [Glycine max]
          Length = 727

 Score =  527 bits (1357), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 264/655 (40%), Positives = 403/655 (61%), Gaps = 2/655 (0%)

Query: 130 LHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCC 189
           +H   ++SG   + F+   LV+       +  ARK+FD+    D  +WN++I    +N  
Sbjct: 75  IHNRLVISGLQHNGFLMTKLVNGSSNLGQICYARKLFDEFCYPDVFMWNAIIRSYSRNNM 134

Query: 190 FQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLT 249
           ++D++ ++  M R  G   D  +   VL A  E+ +  L   I    +K GF   V+V  
Sbjct: 135 YRDTVEMYRWM-RWTGVHPDGFTFPYVLKACTELLDFGLSCIIHGQIIKYGFGSDVFVQN 193

Query: 250 GLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERV 309
           GLV+ Y+KCG +  A+++F  +    ++S  ++ISGY  NGK   +LR+F Q+  +  + 
Sbjct: 194 GLVALYAKCGHIGVAKVVFDGLYHRTIVSWTSIISGYAQNGKAVEALRMFSQMRNNGVKP 253

Query: 310 NSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLF 369
           +   +V ++  +     L     IH F +K G+    ++L +L+  Y++   +  A+  F
Sbjct: 254 DWIALVSILRAYTDVDDLEQGRSIHGFVIKMGLEDEPALLISLTAFYAKCGLVTVAKSFF 313

Query: 370 DESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAIS 429
           D+    ++  WNAMI+GY +NG  EEA++LF  M +  + P+ VTV S + A AQ+G++ 
Sbjct: 314 DQMKTTNVIMWNAMISGYAKNGHAEEAVNLFHYMISRNIKPDSVTVRSAVLASAQVGSLE 373

Query: 430 LGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYG 489
           L +W+ + V   N+ S+I+V+T+LIDMYAKCG++  AR +FD  S K  V W+ MI GYG
Sbjct: 374 LAQWMDDYVSKSNYGSDIFVNTSLIDMYAKCGSVEFARRVFDRNSDKDVVMWSAMIMGYG 433

Query: 490 LHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLA 549
           LHG G EA+ L+  M  +G+ P+ VTF+ +L AC+H+GLV+EG E+F  M  D    P  
Sbjct: 434 LHGQGWEAINLYHVMKQAGVFPNDVTFIGLLTACNHSGLVKEGWELFHCM-KDFEIVPRN 492

Query: 550 EHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFE 609
           EHY+C+VD+LGRAG L +A  FI  + +EPG +VWGALL AC I++   L   A+ KLF 
Sbjct: 493 EHYSCVVDLLGRAGYLGEACAFIMKIPIEPGVSVWGALLSACKIYRCVTLGEYAANKLFS 552

Query: 610 LDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQ 669
           LDP N G++V LSN+Y++   +   A VR +++++ L K  G ++IE+ G    F  GD+
Sbjct: 553 LDPYNTGHYVQLSNLYASSCLWDCVAHVRVLMREKGLNKDLGYSVIEINGKLQAFHVGDK 612

Query: 670 LHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIAT 729
            HP +  I+  L++L  +++E GF   T + LHD+  EEKE  +  HSE++A+A+GLI+T
Sbjct: 613 SHPMAKEIFDELQRLERRLKEVGFVPYTESVLHDLNYEEKEENLSFHSERIAVAYGLIST 672

Query: 730 EPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
            PGT +RI KNLR C++CH+A K ISK+  R I+VRDANRFHHFK G+CSCGDYW
Sbjct: 673 APGTTLRITKNLRACVNCHSAIKLISKLVEREIIVRDANRFHHFKDGLCSCGDYW 727



 Score =  253 bits (647), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 149/460 (32%), Positives = 243/460 (52%), Gaps = 2/460 (0%)

Query: 7   QSRNLFLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFS 66
            S + + SL+  +  +  L Q H +++I G Q++   +TKL +  S+    CYAR LF  
Sbjct: 54  NSDSFYASLIDNSTHKRHLDQIHNRLVISGLQHNGFLMTKLVNGSSNLGQICYARKLFDE 113

Query: 67  IPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSI 126
              PD+F++N IIR +S N M + ++  Y  +R  T + PD FT+ +VL A +   D  +
Sbjct: 114 FCYPDVFMWNAIIRSYSRNNMYRDTVEMYRWMRW-TGVHPDGFTFPYVLKACTELLDFGL 172

Query: 127 GVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMK 186
             ++HG  I  G+GSD+FV   LV LY K   +  A+ VFD +  +  V W S+ISG  +
Sbjct: 173 SCIIHGQIIKYGFGSDVFVQNGLVALYAKCGHIGVAKVVFDGLYHRTIVSWTSIISGYAQ 232

Query: 187 NCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVY 246
           N    +++ +F  M RN G   D  ++ ++L A  +V +L  G  I    +K+G  D   
Sbjct: 233 NGKAVEALRMFSQM-RNNGVKPDWIALVSILRAYTDVDDLEQGRSIHGFVIKMGLEDEPA 291

Query: 247 VLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASA 306
           +L  L +FY+KCG V  A+  F  +   ++I  NAMISGY  NG  E ++ LF  +++  
Sbjct: 292 LLISLTAFYAKCGLVTVAKSFFDQMKTTNVIMWNAMISGYAKNGHAEEAVNLFHYMISRN 351

Query: 307 ERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAAR 366
            + +S T+   +      G L L   +  +  KS   S+  V T+L  +Y++   +E AR
Sbjct: 352 IKPDSVTVRSAVLASAQVGSLELAQWMDDYVSKSNYGSDIFVNTSLIDMYAKCGSVEFAR 411

Query: 367 KLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLG 426
           ++FD +S+K +  W+AMI GY  +G   EAI+L+  M+ + V PN VT   +L+AC   G
Sbjct: 412 RVFDRNSDKDVVMWSAMIMGYGLHGQGWEAINLYHVMKQAGVFPNDVTFIGLLTACNHSG 471

Query: 427 AISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEA 466
            +  G  +   +K           + ++D+  + G + EA
Sbjct: 472 LVKEGWELFHCMKDFEIVPRNEHYSCVVDLLGRAGYLGEA 511


>gi|224075493|ref|XP_002304652.1| predicted protein [Populus trichocarpa]
 gi|222842084|gb|EEE79631.1| predicted protein [Populus trichocarpa]
          Length = 820

 Score =  527 bits (1357), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 292/793 (36%), Positives = 445/793 (56%), Gaps = 12/793 (1%)

Query: 1   MSMKTPQSRNLFLSLLKGAKTQSQLTQ--------THAQIIIHGFQNDLSTVTKLAHRLS 52
           ++ +T  S   F + + G+  QS +           H +II  G   DL     L +   
Sbjct: 31  LAQRTSHSSPEFNTYIYGSLLQSCIRNGDCATGKYLHCEIIKKGNCLDLFANNILLNFYV 90

Query: 53  DFKATCYARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLR-KNTALTPDNFTY 111
            + +   A  LF  +P  +   F  +I+G+S       +I  ++ L+ +   L P  F +
Sbjct: 91  KYDSLPDAAKLFDEMPDRNTVSFVTLIQGYSQCLRFSEAIGLFSRLQGEGHELNP--FVF 148

Query: 112 SFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPE 171
           S VL    +     +G  +H      G+ SD FVG AL+D Y    + + AR+VFD +  
Sbjct: 149 STVLKLLVSAEWAKLGFSVHACVYKLGFDSDAFVGTALIDCYSVCGYAECARQVFDAIEY 208

Query: 172 KDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGME 231
           KD V W  M++  ++N CF++S+ +F  M R  G   ++ + A+VL A   ++   +G  
Sbjct: 209 KDMVSWTGMVACYVENECFEESLKLFSRM-RIVGFKPNNFTFASVLKACVGLEVFNVGKA 267

Query: 232 IQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGK 291
           +     K  + + ++V   L+  Y K G+V+ A  +F ++ + D+I  + MI+ Y  + +
Sbjct: 268 VHGCAFKTSYLEELFVGVELIDLYIKSGDVDDALQVFEEMPKDDVIPWSFMIARYAQSEQ 327

Query: 292 TESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTA 351
           +E ++ +F ++       N  T+  L+        L L N IH   +K G+  N  V  A
Sbjct: 328 SEEAIEMFCRMRRGLVLPNQFTLASLLQACASLVDLQLGNQIHCHVVKVGLDMNVFVSNA 387

Query: 352 LSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPN 411
           L  +Y++   ME + +LF ES   +  SWN +I GY Q G  E+A+ LF++M   +V   
Sbjct: 388 LMDMYAKCGRMENSLQLFSESPNCTDVSWNTVIVGYVQAGNGEKALILFKDMLECQVQGT 447

Query: 412 PVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFD 471
            VT SS+L ACA + A+  G  +H L     ++ N  V  ALIDMYAKCGNI +AR +FD
Sbjct: 448 EVTYSSVLRACAGIAALEPGSQIHSLSVKTIYDKNTVVGNALIDMYAKCGNIKDARLVFD 507

Query: 472 LMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVRE 531
           ++    +V+WN MISGY +HG   EAL+ F  ML +  +P  VTF+ +L ACS+AGL+  
Sbjct: 508 MLREHDQVSWNAMISGYSVHGLYGEALKTFESMLETECKPDKVTFVGILSACSNAGLLDR 567

Query: 532 GDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGAC 591
           G   F+SM+ ++  +P AEHY CMV +LGR+G L+KA + +  +  EP   VW ALL AC
Sbjct: 568 GQAYFKSMVEEYDIEPCAEHYTCMVWLLGRSGHLDKAAKLVHEIPFEPSVMVWRALLSAC 627

Query: 592 MIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPG 651
           +IH D  L R++++++ E++PE+   HVLLSNIY+  R +   A++R  +K++ + K PG
Sbjct: 628 VIHNDVELGRISAQRVLEIEPEDEATHVLLSNIYANARRWGNVASIRTSMKRKGIRKEPG 687

Query: 652 CTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKEL 711
            + IE  G  H F+ GD  HP +  I  MLE LN K R  G+  +  + L DVE+ +KE 
Sbjct: 688 LSWIENQGRVHYFSVGDTSHPDTKLINGMLEWLNMKARNEGYVPDFSSVLLDVEDVDKEQ 747

Query: 712 MMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFH 771
            + VHSE+LA+A+GLI T   + +RIIKNLR+C DCH A K ISK+  R I++RD NRFH
Sbjct: 748 RLWVHSERLALAYGLIRTPSISPLRIIKNLRICADCHAAIKLISKIVQRDIIIRDMNRFH 807

Query: 772 HFKGGVCSCGDYW 784
           HF  G+CSCGDYW
Sbjct: 808 HFHEGICSCGDYW 820


>gi|297741272|emb|CBI32403.3| unnamed protein product [Vitis vinifera]
          Length = 658

 Score =  526 bits (1356), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 277/656 (42%), Positives = 390/656 (59%), Gaps = 36/656 (5%)

Query: 130 LHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCC 189
           LH   +V+G    +F+   LV+LY     V  +R  FD++P+KD   WNSMIS  + N  
Sbjct: 38  LHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYVHNGH 97

Query: 190 FQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLT 249
           F ++I  F  ++       D  +   VL A   + +   G +I C   KLGF  +V+V  
Sbjct: 98  FHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVD---GRKIHCWAFKLGFQWNVFVAA 154

Query: 250 GLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERV 309
            L+  YS+ G    A  LF D+   D+ S NAMISG   NG    +L +  ++     ++
Sbjct: 155 SLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKM 214

Query: 310 NSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLF 369
           N  T+V ++PVF                                 +Y++L  +++A K+F
Sbjct: 215 NFVTVVSILPVFV-------------------------------DMYAKLGLLDSAHKVF 243

Query: 370 DESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASK-VAPNPVTVSSILSACAQLGAI 428
           +    K + SWN +I GY QNGL  EAI +++ M+  K + PN  T  SIL A A +GA+
Sbjct: 244 EIIPVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGAL 303

Query: 429 SLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGY 488
             G  +H  V   N   +++V+T LID+Y KCG +V+A  LF  +  +S VTWN +IS +
Sbjct: 304 QQGMKIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCH 363

Query: 489 GLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPL 548
           G+HGH  + L+LF EML  G++P  VTF+S+L ACSH+G V EG   F+ ++ ++G KP 
Sbjct: 364 GIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFR-LMQEYGIKPS 422

Query: 549 AEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLF 608
            +HY CMVD+LGRAG LE A +FIK + ++P  ++WGALLGAC IH +  L + AS++LF
Sbjct: 423 LKHYGCMVDLLGRAGYLEMAYDFIKDMPLQPDASIWGALLGACRIHGNIELGKFASDRLF 482

Query: 609 ELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGD 668
           E+D +NVGY+VLLSNIY+    +     VR + ++R L K PG + IEV     VF +G+
Sbjct: 483 EVDSKNVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWSTIEVNRKVDVFYTGN 542

Query: 669 QLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIA 728
           Q HP+   IY  L  L  KM+  G+  +    L DVEE+EKE ++  HSE+LAIAFG+I+
Sbjct: 543 QSHPKCKEIYEELRVLTAKMKSLGYIPDYSFVLQDVEEDEKEHILTSHSERLAIAFGIIS 602

Query: 729 TEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           T P + IRI KNLRVC DCH ATKFIS++T R IVVRD+NRFHHFK G+CSCGDYW
Sbjct: 603 TPPKSPIRIFKNLRVCGDCHNATKFISRITQREIVVRDSNRFHHFKDGICSCGDYW 658



 Score =  182 bits (462), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 130/491 (26%), Positives = 232/491 (47%), Gaps = 40/491 (8%)

Query: 7   QSRNLFLSLLKGAKTQSQLTQT-HAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFF 65
           Q+  +  + L  + T++   +  HA +++ G    +   T+L +  ++      +R  F 
Sbjct: 16  QNEEIDFNFLFDSSTKTPFAKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFD 75

Query: 66  SIPKPDLFLFNVIIRGFSNNEMPKSSI-CFYTHLRKNTALTPDNFTYSFVLSAASACCDR 124
            IP+ D++ +N +I  + +N     +I CFY  L   + + PD +T+  VL A     D 
Sbjct: 76  QIPQKDVYAWNSMISAYVHNGHFHEAIGCFY-QLLLVSEIRPDFYTFPPVLKACGTLVD- 133

Query: 125 SIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGL 184
             G  +H  A   G+  ++FV A+L+ +Y +F +   AR +FD MP +D   WN+MISGL
Sbjct: 134 --GRKIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGL 191

Query: 185 MKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDH 244
           ++N               N    LD             + E+RL       G+K+ F   
Sbjct: 192 IQN--------------GNAAQALDV------------LDEMRLE------GIKMNFVTV 219

Query: 245 VYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLA 304
           V +L   V  Y+K G ++ A  +F  I   D+IS N +I+GY  NG    ++ +++ +  
Sbjct: 220 VSILPVFVDMYAKLGLLDSAHKVFEIIPVKDVISWNTLITGYAQNGLASEAIEVYKMMEE 279

Query: 305 SAERV-NSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEME 363
             E + N  T V ++P +   G L     IH   +K+ +  +  V T L  VY +   + 
Sbjct: 280 CKEIIPNQGTWVSILPAYAHVGALQQGMKIHGRVIKTNLHLDVFVATCLIDVYGKCGRLV 339

Query: 364 AARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACA 423
            A  LF +  ++S  +WNA+I+ +  +G  E+ + LF EM    V P+ VT  S+LSAC+
Sbjct: 340 DAMSLFYQVPQESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACS 399

Query: 424 QLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVT-WN 482
             G +  GKW   L++    + ++     ++D+  + G +  A +    M  + + + W 
Sbjct: 400 HSGFVEEGKWCFRLMQEYGIKPSLKHYGCMVDLLGRAGYLEMAYDFIKDMPLQPDASIWG 459

Query: 483 TMISGYGLHGH 493
            ++    +HG+
Sbjct: 460 ALLGACRIHGN 470



 Score = 72.4 bits (176), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 69/309 (22%), Positives = 134/309 (43%), Gaps = 10/309 (3%)

Query: 1   MSMKTPQSRNLFLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATC-- 58
           M  +   S N  +S L      +Q      ++ + G + +  TV  +     D  A    
Sbjct: 176 MPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVFVDMYAKLGL 235

Query: 59  --YARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLS 116
              A  +F  IP  D+  +N +I G++ N +   +I  Y  + +   + P+  T+  +L 
Sbjct: 236 LDSAHKVFEIIPVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILP 295

Query: 117 AASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVL 176
           A +       G+ +HG  I +    D+FV   L+D+Y K   +  A  +F ++P++ +V 
Sbjct: 296 AYAHVGALQQGMKIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVT 355

Query: 177 WNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLG 236
           WN++IS    +   + ++ +FG+M+ + G   D  +  ++L A +    +  G     L 
Sbjct: 356 WNAIISCHGIHGHAEKTLKLFGEML-DEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLM 414

Query: 237 LKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDI-VRPDLISCNAMISGYTCNGKTE-- 293
            + G    +     +V    + G +E A    +D+ ++PD     A++     +G  E  
Sbjct: 415 QEYGIKPSLKHYGCMVDLLGRAGYLEMAYDFIKDMPLQPDASIWGALLGACRIHGNIELG 474

Query: 294 --SSLRLFR 300
             +S RLF 
Sbjct: 475 KFASDRLFE 483



 Score = 62.4 bits (150), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 39/107 (36%), Positives = 59/107 (55%), Gaps = 4/107 (3%)

Query: 430 LGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYG 489
             K +H L+       +I++ST L+++YA  G++  +R  FD +  K    WN+MIS Y 
Sbjct: 34  FAKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYV 93

Query: 490 LHGHGLEALQLFSEMLH-SGIRPSGVTFLSVLYACSHAGLVREGDEI 535
            +GH  EA+  F ++L  S IRP   TF  VL AC   G + +G +I
Sbjct: 94  HNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKAC---GTLVDGRKI 137


>gi|357453021|ref|XP_003596787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355485835|gb|AES67038.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 867

 Score =  526 bits (1356), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 298/801 (37%), Positives = 445/801 (55%), Gaps = 26/801 (3%)

Query: 4   KTPQSRNLFLSLLKGAKTQSQLT------------------QTHAQIIIHGFQNDLSTVT 45
           +T ++ NLF+SLL  +    + T                  Q H Q +  G  + +S  T
Sbjct: 73  QTKEALNLFVSLLHSSLQPDESTLSCVFNICAGSLDGKLGRQVHCQCVKFGLVDHVSVGT 132

Query: 46  KLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALT 105
            L       +     R +F  + + ++  +  ++ G+S N +       +  ++    L 
Sbjct: 133 SLVDMYMKTENVNDGRRVFDEMGERNVVSWTSLLAGYSWNGLYGYVWELFCQMQYEGVL- 191

Query: 106 PDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKV 165
           P+ +T S V++A        IG+ +H   +  G+   + V  +L+ LY +   ++ AR V
Sbjct: 192 PNRYTVSTVIAALVNEGVVGIGLQVHAMVVKHGFEEAIPVFNSLISLYSRLGMLRDARDV 251

Query: 166 FDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQE 225
           FDKM  +D V WNSMI+G ++N    +   +F  M +  G      + A+V+ + A ++E
Sbjct: 252 FDKMEIRDWVTWNSMIAGYVRNGQDLEVFEIFNKM-QLAGVKPTHMTFASVIKSCASLRE 310

Query: 226 LRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVR-PDLISCNAMIS 284
           L L   +QC  LK GF     V+T L+   SKC E++ A  LF  +    +++S  AMIS
Sbjct: 311 LALVKLMQCKALKSGFTTDQIVITALMVALSKCKEMDDALSLFSLMEEGKNVVSWTAMIS 370

Query: 285 GYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVS 344
           G   NG  + ++ LF Q+     + N  T   ++ V YP       + +H+  +K+    
Sbjct: 371 GCLQNGGNDQAVNLFSQMRREGVKPNHFTYSAILTVHYPV----FVSEMHAEVIKTNYER 426

Query: 345 NSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQ 404
           +SSV TAL   Y +L     A K+F+    K L +W+AM+AGY Q G TEEA  LF ++ 
Sbjct: 427 SSSVGTALLDAYVKLGNTIDAVKVFEIIEAKDLMAWSAMLAGYAQTGETEEAAKLFHQLI 486

Query: 405 ASKVAPNPVTVSSILSACAQ-LGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNI 463
              + PN  T SS+++ACA    A   GK  H         + + VS+AL+ MYAK GNI
Sbjct: 487 KEGIKPNEFTFSSVINACASPTAAAEQGKQFHAYAIKMRLNNALCVSSALVTMYAKRGNI 546

Query: 464 VEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYAC 523
             A E+F     +  V+WN+MISGY  HG   +AL++F EM    +    VTF+ V+ AC
Sbjct: 547 DSAHEVFKRQKERDLVSWNSMISGYSQHGQAKKALEVFDEMQKRNMDVDAVTFIGVITAC 606

Query: 524 SHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAV 583
           +HAGLV +G + F SMI+DH   P  +HY+CM+D+  RAG LEKA+  I  +   PG  V
Sbjct: 607 THAGLVEKGQKYFNSMINDHHINPTMKHYSCMIDLYSRAGMLEKAMGIINEMPFPPGATV 666

Query: 584 WGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKK 643
           W  LLGA  +H++  L  +A+EKL  L PE+   +VLLSN+Y+A  ++ +   VR+++ K
Sbjct: 667 WRTLLGAARVHRNVELGELAAEKLISLQPEDSAAYVLLSNMYAAAGNWQERTNVRKLMDK 726

Query: 644 RKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHD 703
           RK+ K PG + IEV    + F +GD  HP S  IY+ L +L+ ++++AG+Q +T    HD
Sbjct: 727 RKVKKEPGYSWIEVKNKTYSFLAGDLTHPLSNQIYSKLSELSIRLKDAGYQPDTKNVFHD 786

Query: 704 VEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIV 763
           +E+E+KE ++  HSE+LAIAFGLIAT P   I+I+KNLRVC DCH  TK +S V  R IV
Sbjct: 787 IEDEQKETILSHHSERLAIAFGLIATPPEIPIQIVKNLRVCGDCHNFTKLVSLVEQRYIV 846

Query: 764 VRDANRFHHFKGGVCSCGDYW 784
           VRD+NRFHHFK G+CSCGDYW
Sbjct: 847 VRDSNRFHHFKDGLCSCGDYW 867



 Score = 99.8 bits (247), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 59/228 (25%), Positives = 116/228 (50%), Gaps = 4/228 (1%)

Query: 365 ARKLFDESSEK--SLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSAC 422
           A  LFD+   +  +L   N ++  Y+++  T+EA++LF  +  S + P+  T+S + + C
Sbjct: 44  AHNLFDKIPHRPTTLKEHNQLLFSYSRDKQTKEALNLFVSLLHSSLQPDESTLSCVFNIC 103

Query: 423 AQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWN 482
           A      LG+ VH          ++ V T+L+DMY K  N+ + R +FD M  ++ V+W 
Sbjct: 104 AGSLDGKLGRQVHCQCVKFGLVDHVSVGTSLVDMYMKTENVNDGRRVFDEMGERNVVSWT 163

Query: 483 TMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHD 542
           ++++GY  +G      +LF +M + G+ P+  T  +V+ A  + G+V  G ++  +M+  
Sbjct: 164 SLLAGYSWNGLYGYVWELFCQMQYEGVLPNRYTVSTVIAALVNEGVVGIGLQV-HAMVVK 222

Query: 543 HGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGA 590
           HGF+     +  ++ +  R G L  A +    + +      W +++  
Sbjct: 223 HGFEEAIPVFNSLISLYSRLGMLRDARDVFDKMEIRDW-VTWNSMIAG 269


>gi|15226200|ref|NP_180329.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75216862|sp|Q9ZUW3.1|PP172_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g27610
 gi|3860271|gb|AAC73039.1| putative selenium-binding protein [Arabidopsis thaliana]
 gi|330252926|gb|AEC08020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 868

 Score =  525 bits (1352), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 292/767 (38%), Positives = 438/767 (57%), Gaps = 21/767 (2%)

Query: 27  QTHAQIIIHGFQNDLSTVTKLAH---RLSDFKATCYARALFFSIPKPDLFLFNVIIRGFS 83
           Q H Q I  GF +D+S  T L     + S+FK     R +F  + + ++  +  +I G++
Sbjct: 114 QLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKD---GRKVFDEMKERNVVTWTTLISGYA 170

Query: 84  NNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDL 143
            N M    +  +  + +N    P++FT++  L   +       G+ +H   + +G    +
Sbjct: 171 RNSMNDEVLTLFMRM-QNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTI 229

Query: 144 FVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRN 203
            V  +L++LY K   V+ AR +FDK   K  V WNSMISG   N    +++ +F  M R 
Sbjct: 230 PVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSM-RL 288

Query: 204 GGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVER 263
               L  +S A+V+   A ++ELR   ++ C  +K GF     + T L+  YSKC  +  
Sbjct: 289 NYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLD 348

Query: 264 AELLFRDI-VRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNS---STIVGLIP 319
           A  LF++I    +++S  AMISG+  N   E ++ LF ++     R N    S I+  +P
Sbjct: 349 ALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALP 408

Query: 320 VFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLAS 379
           V  P       + +H+  +K+    +S+V TAL   Y +L ++E A K+F    +K + +
Sbjct: 409 VISP-------SEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVA 461

Query: 380 WNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGA-ISLGKWVHELV 438
           W+AM+AGY Q G TE AI +F E+    + PN  T SSIL+ CA   A +  GK  H   
Sbjct: 462 WSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFA 521

Query: 439 KSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEAL 498
                +S++ VS+AL+ MYAK GNI  A E+F     K  V+WN+MISGY  HG  ++AL
Sbjct: 522 IKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKAL 581

Query: 499 QLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDI 558
            +F EM    ++  GVTF+ V  AC+HAGLV EG++ F  M+ D    P  EH +CMVD+
Sbjct: 582 DVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDL 641

Query: 559 LGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYH 618
             RAGQLEKA++ I+ +    G  +W  +L AC +HK T L R+A+EK+  + PE+   +
Sbjct: 642 YSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAY 701

Query: 619 VLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIY 678
           VLLSN+Y+   D+ + A VR+++ +R + K PG + IEV    + F +GD+ HP    IY
Sbjct: 702 VLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQIY 761

Query: 679 AMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRII 738
             LE L+ ++++ G++ +T   L D+++E KE ++  HSE+LAIAFGLIAT  G+ + II
Sbjct: 762 MKLEDLSTRLKDLGYEPDTSYVLQDIDDEHKEAVLAQHSERLAIAFGLIATPKGSPLLII 821

Query: 739 KNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKG-GVCSCGDYW 784
           KNLRVC DCH   K I+K+  R IVVRD+NRFHHF   GVCSCGD+W
Sbjct: 822 KNLRVCGDCHLVIKLIAKIEEREIVVRDSNRFHHFSSDGVCSCGDFW 868



 Score =  162 bits (409), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 125/455 (27%), Positives = 219/455 (48%), Gaps = 22/455 (4%)

Query: 146 GAALVDLYFKFSWVKSAR-----KVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDM 200
           G A V +Y  F  V S+R      +FDK P +D   + S++ G  ++   Q++  +F ++
Sbjct: 26  GVAQVRIYC-FGTVSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNI 84

Query: 201 VRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGE 260
            R G   +D +  ++VL   A + +   G ++ C  +K GF D V V T LV  Y K   
Sbjct: 85  HRLG-MEMDCSIFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSN 143

Query: 261 VERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPV 320
            +    +F ++   ++++   +ISGY  N   +  L LF ++     + NS T    + V
Sbjct: 144 FKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGV 203

Query: 321 FYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASW 380
               G       +H+  +K+G+     V  +L  +Y +   +  AR LFD++  KS+ +W
Sbjct: 204 LAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTW 263

Query: 381 NAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKS 440
           N+MI+GY  NGL  EA+ +F  M+ + V  +  + +S++  CA L  +   + +H  V  
Sbjct: 264 NSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVK 323

Query: 441 RNFESNIYVSTALIDMYAKCGNIVEARELF-DLMSHKSEVTWNTMISGYGLHGHGLEALQ 499
             F  +  + TAL+  Y+KC  +++A  LF ++    + V+W  MISG+  +    EA+ 
Sbjct: 324 YGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVD 383

Query: 500 LFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYA----CM 555
           LFSEM   G+RP+  T+  +L A            I  S +H    K   E  +     +
Sbjct: 384 LFSEMKRKGVRPNEFTYSVILTALP---------VISPSEVHAQVVKTNYERSSTVGTAL 434

Query: 556 VDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGA 590
           +D   + G++E+A +   G+  +     W A+L  
Sbjct: 435 LDAYVKLGKVEEAAKVFSGID-DKDIVAWSAMLAG 468


>gi|356503240|ref|XP_003520419.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Glycine max]
          Length = 801

 Score =  524 bits (1350), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 281/792 (35%), Positives = 444/792 (56%), Gaps = 16/792 (2%)

Query: 1   MSMKTPQSRNLFLS-LLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCY 59
           +S+ + Q+ N + S  LK  ++Q +    H Q  +H    +L+   +L        + C 
Sbjct: 18  ISIHSFQNTNQYHSPTLKFTQSQPKPNVPHIQQELH---INLNETQQLHGHFIKTSSNCS 74

Query: 60  ARALFFSIPK--PDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSA 117
            R    ++     +  + + +I  +  N  P  +   Y ++R  T    DNF    VL A
Sbjct: 75  YRVPLAALESYSSNAAIHSFLITSYIKNNCPADAAKIYAYMR-GTDTEVDNFVIPSVLKA 133

Query: 118 ASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLW 177
                   +G  +HG  + +G+  D+FV  AL+ +Y +   +  AR +FDK+  KD V W
Sbjct: 134 CCLIPSFLLGQEVHGFVVKNGFHGDVFVCNALIMMYSEVGSLALARLLFDKIENKDVVSW 193

Query: 178 NSMISGLMKNCCFQDSIWVFGDM--VRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCL 235
           ++MI    ++    +++ +  DM  +R   + +   S+  VL   AE+ +L+LG  +   
Sbjct: 194 STMIRSYDRSGLLDEALDLLRDMHVMRVKPSEIGMISITHVL---AELADLKLGKAMHAY 250

Query: 236 GLKLGF--HDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYT-CNGKT 292
            ++ G      V + T L+  Y KC  +  A  +F  + +  +IS  AMI+ Y  CN   
Sbjct: 251 VMRNGKCGKSGVPLCTALIDMYVKCENLAYARRVFDGLSKASIISWTAMIAAYIHCNNLN 310

Query: 293 ESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTAL 352
           E  +RLF ++L      N  T++ L+      G L L   +H+F L++G   +  + TA 
Sbjct: 311 EG-VRLFVKMLGEGMFPNEITMLSLVKECGTAGALELGKLLHAFTLRNGFTLSLVLATAF 369

Query: 353 STVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNP 412
             +Y +  ++ +AR +FD    K L  W+AMI+ Y QN   +EA  +F  M    + PN 
Sbjct: 370 IDMYGKCGDVRSARSVFDSFKSKDLMMWSAMISSYAQNNCIDEAFDIFVHMTGCGIRPNE 429

Query: 413 VTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDL 472
            T+ S+L  CA+ G++ +GKW+H  +  +  + ++ + T+ +DMYA CG+I  A  LF  
Sbjct: 430 RTMVSLLMICAKAGSLEMGKWIHSYIDKQGIKGDMILKTSFVDMYANCGDIDTAHRLFAE 489

Query: 473 MSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREG 532
            + +    WN MISG+ +HGHG  AL+LF EM   G+ P+ +TF+  L+ACSH+GL++EG
Sbjct: 490 ATDRDISMWNAMISGFAMHGHGEAALELFEEMEALGVTPNDITFIGALHACSHSGLLQEG 549

Query: 533 DEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACM 592
             +F  M+H+ GF P  EHY CMVD+LGRAG L++A E IK + + P  AV+G+ L AC 
Sbjct: 550 KRLFHKMVHEFGFTPKVEHYGCMVDLLGRAGLLDEAHELIKSMPMRPNIAVFGSFLAACK 609

Query: 593 IHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGC 652
           +HK+  L   A+++   L+P   GY+VL+SNIY++   +   A +R+ +K   + K PG 
Sbjct: 610 LHKNIKLGEWAAKQFLSLEPHKSGYNVLMSNIYASANRWGDVAYIRRAMKDEGIVKEPGV 669

Query: 653 TLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELM 712
           + IEV G  H F  GD+ HP +  +Y M++++  K+ +AG+  +    LH++++E+K   
Sbjct: 670 SSIEVNGLLHEFIMGDREHPDAKKVYEMIDEMREKLEDAGYTPDVSCVLHNIDKEKKVSA 729

Query: 713 MKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHH 772
           +  HSEKLA+A+GLI+T PG  IRI+KNLRVC DCH ATK +SK+ GR I+VRD NRFHH
Sbjct: 730 LNYHSEKLAMAYGLISTAPGVPIRIVKNLRVCDDCHNATKLLSKIYGREIIVRDRNRFHH 789

Query: 773 FKGGVCSCGDYW 784
           FK G CSC DYW
Sbjct: 790 FKEGSCSCCDYW 801


>gi|296084942|emb|CBI28351.3| unnamed protein product [Vitis vinifera]
          Length = 770

 Score =  523 bits (1348), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 281/729 (38%), Positives = 428/729 (58%), Gaps = 5/729 (0%)

Query: 59  YARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAA 118
           +++ LF   P+  L   N ++  FS N+  K ++  +  LR++ + T D  + S VL   
Sbjct: 44  HSQQLFDETPQQGLSRNNHLLFEFSRNDQNKEALNLFLGLRRSGSPT-DGSSLSCVLKVC 102

Query: 119 SACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWN 178
               DR +G  +H   I  G+  D+ VG +LVD+Y K   V+   +VFD+M  K+ V W 
Sbjct: 103 GCLFDRIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWT 162

Query: 179 SMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLK 238
           S+++G  +N   + ++ +F  M +  G   +  + AAVL  +A    +  G+++  + +K
Sbjct: 163 SLLAGYRQNGLNEQALKLFSQM-QLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIK 221

Query: 239 LGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRL 298
            G    ++V   +V+ YSK   V  A+ +F  +   + +S N+MI+G+  NG    +  L
Sbjct: 222 SGLDSTIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFEL 281

Query: 299 FRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSR 358
           F ++     ++  +    +I +      +     +H   +K+G   + ++ TAL   YS+
Sbjct: 282 FYRMRLEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSK 341

Query: 359 LNEMEAARKLF-DESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASK-VAPNPVTVS 416
            +E++ A KLF      +++ SW A+I+GY QNG T+ A++LF +M+  + V PN  T S
Sbjct: 342 CSEIDDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREEGVEPNEFTFS 401

Query: 417 SILSACAQ-LGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSH 475
           S+L+ACA    ++  GK  H       F + + VS+AL+ MYAK GNI  A E+F     
Sbjct: 402 SVLNACAAPTASVEQGKQFHSCSIKSGFSNALCVSSALVTMYAKRGNIESANEVFKRQVD 461

Query: 476 KSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEI 535
           +  V+WN+MISGY  HG G ++L++F EM    +   G+TF+ V+ AC+HAGLV EG   
Sbjct: 462 RDLVSWNSMISGYAQHGCGKKSLKIFEEMRSKNLELDGITFIGVISACTHAGLVNEGQRY 521

Query: 536 FQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHK 595
           F  M+ D+   P  EHY+CMVD+  RAG LEKA++ I  +    G  +W  LL AC +H 
Sbjct: 522 FDLMVKDYHIVPTMEHYSCMVDLYSRAGMLEKAMDLINKMPFPAGATIWRTLLAACRVHL 581

Query: 596 DTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLI 655
           +  L  +A+EKL  L P++   +VLLSNIY+   ++ + A VR+++  +K+ K  G + I
Sbjct: 582 NVQLGELAAEKLISLQPQDSAAYVLLSNIYATAGNWQERAKVRKLMDMKKVKKEAGYSWI 641

Query: 656 EVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKV 715
           EV      F +GD  HPQS  IY  LE+L+ ++++AG+  +T   LHDVEEE KE+++  
Sbjct: 642 EVKNKTFSFMAGDLSHPQSDRIYLKLEELSIRLKDAGYYPDTKYVLHDVEEEHKEVILSQ 701

Query: 716 HSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKG 775
           HSE+LAIAFGLIAT PGT I+I+KNLRVC DCHT  K ISK+ GR IVVRD+NRFHHFKG
Sbjct: 702 HSERLAIAFGLIATPPGTPIQIVKNLRVCGDCHTVIKLISKIEGRDIVVRDSNRFHHFKG 761

Query: 776 GVCSCGDYW 784
           G CSCGDYW
Sbjct: 762 GSCSCGDYW 770



 Score =  192 bits (488), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 129/470 (27%), Positives = 241/470 (51%), Gaps = 7/470 (1%)

Query: 27  QTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNE 86
           Q H Q I  GF  D+S  T L       ++      +F  +   ++  +  ++ G+  N 
Sbjct: 113 QVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSLLAGYRQNG 172

Query: 87  MPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVG 146
           + + ++  ++ ++    + P+ FT++ VL   +A      GV +H   I SG  S +FVG
Sbjct: 173 LNEQALKLFSQMQLE-GIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGLDSTIFVG 231

Query: 147 AALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGT 206
            ++V++Y K   V  A+ VFD M  ++ V WNSMI+G + N    ++  +F  M R  G 
Sbjct: 232 NSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYRM-RLEGV 290

Query: 207 WLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAEL 266
            L  T  A V+   A ++E+    ++ C  +K G    + + T L+  YSKC E++ A  
Sbjct: 291 KLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSEIDDAFK 350

Query: 267 LFRDI-VRPDLISCNAMISGYTCNGKTESSLRLFRQL-LASAERVNSSTIVGLI-PVFYP 323
           LF  +    +++S  A+ISGY  NG+T+ ++ LF Q+        N  T   ++     P
Sbjct: 351 LFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREEGVEPNEFTFSSVLNACAAP 410

Query: 324 FGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAM 383
              +      HS  +KSG  +   V +AL T+Y++   +E+A ++F    ++ L SWN+M
Sbjct: 411 TASVEQGKQFHSCSIKSGFSNALCVSSALVTMYAKRGNIESANEVFKRQVDRDLVSWNSM 470

Query: 384 IAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHEL-VKSRN 442
           I+GY Q+G  ++++ +F+EM++  +  + +T   ++SAC   G ++ G+   +L VK  +
Sbjct: 471 ISGYAQHGCGKKSLKIFEEMRSKNLELDGITFIGVISACTHAGLVNEGQRYFDLMVKDYH 530

Query: 443 FESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVT-WNTMISGYGLH 491
               +   + ++D+Y++ G + +A +L + M   +  T W T+++   +H
Sbjct: 531 IVPTMEHYSCMVDLYSRAGMLEKAMDLINKMPFPAGATIWRTLLAACRVH 580



 Score = 89.4 bits (220), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 77/277 (27%), Positives = 128/277 (46%), Gaps = 15/277 (5%)

Query: 8   SRNLFLSLLK---GAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALF 64
           ++ +F +++K     K  S   Q H Q+I +G   DL+  T L    S       A  LF
Sbjct: 293 TQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSEIDDAFKLF 352

Query: 65  FSIPK-PDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSA-ASACC 122
             +    ++  +  II G+  N     ++  +  +R+   + P+ FT+S VL+A A+   
Sbjct: 353 CMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREEGVEPNEFTFSSVLNACAAPTA 412

Query: 123 DRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMIS 182
               G   H  +I SG+ + L V +ALV +Y K   ++SA +VF +  ++D V WNSMIS
Sbjct: 413 SVEQGKQFHSCSIKSGFSNALCVSSALVTMYAKRGNIESANEVFKRQVDRDLVSWNSMIS 472

Query: 183 GLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFH 242
           G  ++ C + S+ +F +M R+    LD  +   V+ A      +  G         L   
Sbjct: 473 GYAQHGCGKKSLKIFEEM-RSKNLELDGITFIGVISACTHAGLVNEGQRY----FDLMVK 527

Query: 243 DHVYVLT-----GLVSFYSKCGEVERAELLFRDIVRP 274
           D+  V T      +V  YS+ G +E+A  L   +  P
Sbjct: 528 DYHIVPTMEHYSCMVDLYSRAGMLEKAMDLINKMPFP 564


>gi|334185549|ref|NP_188908.2| uncharacterized protein [Arabidopsis thaliana]
 gi|332643144|gb|AEE76665.1| uncharacterized protein [Arabidopsis thaliana]
          Length = 938

 Score =  523 bits (1348), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 282/806 (34%), Positives = 455/806 (56%), Gaps = 37/806 (4%)

Query: 14  SLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHR---LSDFKATCYARALF-FSIPK 69
           S LK  KT  +L   H  +   G  ND+ST+TKL  R   L   ++  +A+ +F  S   
Sbjct: 37  SSLKNCKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESY 96

Query: 70  PDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVL 129
              F++N +IRG++++ +   +I  +  +  N+ ++PD +T+ F LSA +    +  G+ 
Sbjct: 97  GTCFMYNSLIRGYASSGLCNEAILLFLRM-MNSGISPDKYTFPFGLSACAKSRAKGNGIQ 155

Query: 130 LHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCC 189
           +HG  +  GY  DLFV  +LV  Y +   + SARKVFD+M E++ V W SMI G  +   
Sbjct: 156 IHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDF 215

Query: 190 FQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLT 249
            +D++ +F  MVR+     +S ++  V+ A A++++L  G ++       G   +  +++
Sbjct: 216 AKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVS 275

Query: 250 GLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERV 309
            LV  Y KC  ++ A+ LF +    +L  CNAM S Y   G T  +L +F  ++ S  R 
Sbjct: 276 ALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRP 335

Query: 310 NSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLF 369
           +  +++  I       ++      H + L++G  S  ++  AL  +Y + +  + A ++F
Sbjct: 336 DRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIF 395

Query: 370 DESSEKSLASWNAMIAGYTQNG-------------------------------LTEEAIS 398
           D  S K++ +WN+++AGY +NG                               L EEAI 
Sbjct: 396 DRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIE 455

Query: 399 LFQEMQASK-VAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMY 457
           +F  MQ+ + V  + VT+ SI SAC  LGA+ L KW++  ++    + ++ + T L+DM+
Sbjct: 456 VFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMF 515

Query: 458 AKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFL 517
           ++CG+   A  +F+ ++++    W   I    + G+   A++LF +M+  G++P GV F+
Sbjct: 516 SRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFV 575

Query: 518 SVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAV 577
             L ACSH GLV++G EIF SM+  HG  P   HY CMVD+LGRAG LE+A++ I+ + +
Sbjct: 576 GALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPM 635

Query: 578 EPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATV 637
           EP   +W +LL AC +  +  +A  A+EK+  L PE  G +VLLSN+Y++   +   A V
Sbjct: 636 EPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKV 695

Query: 638 RQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTET 697
           R  +K++ L K PG + I++ G  H FTSGD+ HP+   I AML++++ +    G   + 
Sbjct: 696 RLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHLGHVPDL 755

Query: 698 VTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKV 757
              L DV+E+EK  M+  HSEKLA+A+GLI++  GT IRI+KNLRVC DCH+  KF SKV
Sbjct: 756 SNVLMDVDEKEKIFMLSRHSEKLAMAYGLISSNKGTTIRIVKNLRVCSDCHSFAKFASKV 815

Query: 758 TGRVIVVRDANRFHHFKGGVCSCGDY 783
             R I++RD NRFH+ + G CSCGD+
Sbjct: 816 YNREIILRDNNRFHYIRQGKCSCGDF 841



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 108/515 (20%), Positives = 233/515 (45%), Gaps = 35/515 (6%)

Query: 13  LSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDL 72
           LS    ++ +    Q H  I+  G+  DL     L H  ++      AR +F  + + ++
Sbjct: 141 LSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNV 200

Query: 73  FLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHG 132
             +  +I G++  +  K ++  +  + ++  +TP++ T   V+SA +   D   G  ++ 
Sbjct: 201 VSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYA 260

Query: 133 HAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQD 192
               SG   +  + +ALVD+Y K + +  A+++FD+    +  L N+M S  ++    ++
Sbjct: 261 FIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTRE 320

Query: 193 SIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLV 252
           ++ VF +++ + G   D  S+ + + + ++++ +  G       L+ GF     +   L+
Sbjct: 321 ALGVF-NLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALI 379

Query: 253 SFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQL---------- 302
             Y KC   + A  +F  +    +++ N++++GY  NG+ +++   F  +          
Sbjct: 380 DMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNT 439

Query: 303 --------------------LASAERVNSS--TIVGLIPVFYPFGHLHLTNCIHSFCLKS 340
                               + S E VN+   T++ +       G L L   I+ +  K+
Sbjct: 440 IISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKN 499

Query: 341 GIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLF 400
           GI  +  + T L  ++SR  + E+A  +F+  + + +++W A I      G  E AI LF
Sbjct: 500 GIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELF 559

Query: 401 QEMQASKVAPNPVTVSSILSACAQLGAISLGKWV-HELVKSRNFESNIYVSTALIDMYAK 459
            +M    + P+ V     L+AC+  G +  GK + + ++K             ++D+  +
Sbjct: 560 DDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGR 619

Query: 460 CGNIVEARELF-DLMSHKSEVTWNTMISGYGLHGH 493
            G + EA +L  D+    ++V WN++++   + G+
Sbjct: 620 AGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGN 654


>gi|125573515|gb|EAZ15030.1| hypothetical protein OsJ_04972 [Oryza sativa Japonica Group]
          Length = 813

 Score =  522 bits (1344), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 285/738 (38%), Positives = 430/738 (58%), Gaps = 13/738 (1%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRK-NTALTPDNFTYSFVLSAA 118
           A  LF  IP PD+  +N +IR +S++    ++   + + R     + P+N+T+ F L A 
Sbjct: 76  AHHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNYTFPFALKAC 135

Query: 119 SACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWN 178
           SA  D   G  +H HAI +G  +DLFV  AL+D+Y K + +  A  +F  MP +D V WN
Sbjct: 136 SALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARDLVAWN 195

Query: 179 SMISGLMKNCCFQDSIWVFGDM-VRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGL 237
           +M++G   +  +  ++     M ++      +++++ A+LP +A+   L  G  +    +
Sbjct: 196 AMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSVHAYCI 255

Query: 238 KLGFH----------DHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYT 287
           +   H          D V + T L+  Y+KCG +  A  +F  +   + ++ +A+I G+ 
Sbjct: 256 RACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFV 315

Query: 288 CNGKTESSLRLFRQLLASAE-RVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNS 346
              +   +  LF+ +LA     ++ ++I   +       HL +   +H+   KSG+ ++ 
Sbjct: 316 LCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHALLAKSGVHADL 375

Query: 347 SVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQAS 406
           +   +L ++Y++   ++ A  LFDE + K   S++A+++GY QNG  EEA  +F++MQA 
Sbjct: 376 TAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQAC 435

Query: 407 KVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEA 466
            V P+  T+ S++ AC+ L A+  G+  H  V  R   S   +  ALIDMYAKCG I  +
Sbjct: 436 NVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLS 495

Query: 467 RELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHA 526
           R++F++M  +  V+WNTMI+GYG+HG G EA  LF EM + G  P GVTF+ +L ACSH+
Sbjct: 496 RQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHS 555

Query: 527 GLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGA 586
           GLV EG   F  M H +G  P  EHY CMVD+L R G L++A EFI+ + +     VW A
Sbjct: 556 GLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVA 615

Query: 587 LLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKL 646
           LLGAC ++K+ +L +  S  + EL PE  G  VLLSNIYSA   + +AA VR + K +  
Sbjct: 616 LLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSAAGRFDEAAEVRIIQKVQGF 675

Query: 647 AKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEE 706
            K+PGC+ IE+ G+ H F  GDQ HPQS  IY  L+ +   +++ G+Q +T   L D+EE
Sbjct: 676 KKSPGCSWIEINGSLHAFVGGDQSHPQSPEIYRELDNILVGIKKLGYQPDTSFVLQDLEE 735

Query: 707 EEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRD 766
           EEKE  +  HSEKLAIA+G+++      I + KNLRVC DCHT  K IS V  R I+VRD
Sbjct: 736 EEKEKALICHSEKLAIAYGILSLSEDKTIFVTKNLRVCGDCHTVIKHISLVKRRAIIVRD 795

Query: 767 ANRFHHFKGGVCSCGDYW 784
           ANRFHHFK G CSCGD+W
Sbjct: 796 ANRFHHFKNGQCSCGDFW 813



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 42/157 (26%), Positives = 71/157 (45%), Gaps = 1/157 (0%)

Query: 27  QTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNE 86
           Q HA +   G   DL+    L    +       A ALF  +   D   ++ ++ G+  N 
Sbjct: 361 QLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNG 420

Query: 87  MPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVG 146
             + +   +  ++    + PD  T   ++ A S       G   HG  I+ G  S+  + 
Sbjct: 421 RAEEAFLVFKKMQACN-VEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSIC 479

Query: 147 AALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISG 183
            AL+D+Y K   +  +R+VF+ MP +D V WN+MI+G
Sbjct: 480 NALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAG 516


>gi|78183583|dbj|BAD67156.2| PpPPR_77 [Physcomitrella patens]
          Length = 1106

 Score =  522 bits (1344), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 286/780 (36%), Positives = 435/780 (55%), Gaps = 5/780 (0%)

Query: 8    SRNLFLSLLKGAKTQSQLTQ---THAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALF 64
            +R  +LS+L    T   L      H+ I   G  +D+     L    +       AR LF
Sbjct: 329  NRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKARELF 388

Query: 65   FSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDR 124
            +++PK DL  +N II G++  E    ++  Y  + ++  + P   T+  +LSA +     
Sbjct: 389  YTMPKRDLISWNAIIAGYARREDRGEAMRLYKQM-QSEGVKPGRVTFLHLLSACANSSAY 447

Query: 125  SIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGL 184
            + G ++H   + SG  S+  +  AL+++Y +   +  A+ VF+    +D + WNSMI+G 
Sbjct: 448  ADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGH 507

Query: 185  MKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDH 244
             ++  ++ +  +F +M +N     D+ + A+VL      + L LG +I     + G    
Sbjct: 508  AQHGSYETAYKLFQEM-QNEELEPDNITFASVLSGCKNPEALELGKQIHGRITESGLQLD 566

Query: 245  VYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLA 304
            V +   L++ Y +CG ++ A  +F  +   D++S  AMI G    G+   ++ LF Q+  
Sbjct: 567  VNLGNALINMYIRCGSLQDARNVFHSLQHRDVMSWTAMIGGCADQGEDMKAIELFWQMQN 626

Query: 305  SAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEA 364
               R   ST   ++ V      L     + ++ L SG   ++ V  AL + YS+   M  
Sbjct: 627  EGFRPVKSTFSSILKVCTSSACLDEGKKVIAYILNSGYELDTGVGNALISAYSKSGSMTD 686

Query: 365  ARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQ 424
            AR++FD+   + + SWN +IAGY QNGL + A+    +MQ   V PN  +  S+L+AC+ 
Sbjct: 687  AREVFDKMPSRDIVSWNKIIAGYAQNGLGQTAVEFAYQMQEQDVVPNKFSFVSLLNACSS 746

Query: 425  LGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTM 484
              A+  GK VH  +  R  + ++ V  ALI MYAKCG+  EA+E+FD +  K+ VTWN M
Sbjct: 747  FSALEEGKRVHAEIVKRKLQGDVRVGAALISMYAKCGSQGEAQEVFDNIIEKNVVTWNAM 806

Query: 485  ISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHG 544
            I+ Y  HG   +AL  F+ M   GI+P G TF S+L AC+HAGLV EG +IF SM  ++G
Sbjct: 807  INAYAQHGLASKALGFFNCMEKEGIKPDGSTFTSILSACNHAGLVLEGYQIFSSMESEYG 866

Query: 545  FKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVAS 604
              P  EHY C+V +LGRA + ++A   I  +   P  AVW  LLGAC IH +  LA  A+
Sbjct: 867  VLPTIEHYGCLVGLLGRARRFQEAETLINQMPFPPDAAVWETLLGACRIHGNIALAEHAA 926

Query: 605  EKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVF 664
                +L+  N   ++LLSN+Y+A   +   A +R+V++ R + K PG + IEV    H F
Sbjct: 927  NNALKLNARNPAVYILLSNVYAAAGRWDDVAKIRRVMEGRGIRKEPGRSWIEVDNIIHEF 986

Query: 665  TSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAF 724
             + D+ HP++  IYA L++L+ +M EAG+  +T   LHD+ +  +E  +  HSE+LAIA+
Sbjct: 987  IAADRSHPETAEIYAELKRLSVEMEEAGYFPDTQHVLHDLGKAHQETSLCTHSERLAIAY 1046

Query: 725  GLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
            GLI T PGT IRI KNLR+C DCHTA+KFISK+ GR I+ RD+NRFH FK G CSC DYW
Sbjct: 1047 GLIKTPPGTPIRIFKNLRICGDCHTASKFISKLVGREIIARDSNRFHSFKNGKCSCEDYW 1106



 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 154/590 (26%), Positives = 285/590 (48%), Gaps = 7/590 (1%)

Query: 5   TPQSRNLFLSLLKGAKTQSQLTQT---HAQIIIHGFQNDLSTVTKLAHRLSDFKATCYAR 61
           T   R  +++LL+    +  L +    HAQ++      D+     L +     ++   A 
Sbjct: 23  TETERATYVALLQNCTRKRLLPEAKRIHAQMVEAWVGPDIFLSNLLINMYVKCRSVLDAH 82

Query: 62  ALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASAC 121
            +F  +P+ D+  +N +I  ++     K +   +  + +N    P+  TY  +L+A  + 
Sbjct: 83  QVFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEM-QNAGFIPNKITYISILTACYSP 141

Query: 122 CDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMI 181
            +   G  +H   I +GY  D  V  +L+ +Y K   +  AR+VF  +  +D V +N+M+
Sbjct: 142 AELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTML 201

Query: 182 SGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGF 241
               +    ++ + +FG M   G +  D  +   +L A      L  G  I  L ++ G 
Sbjct: 202 GLYAQKAYVKECLGLFGQMSSEGIS-PDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGL 260

Query: 242 HDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQ 301
           +  + V T LV+   +CG+V+ A+  F+     D++  NA+I+    +G    +   + +
Sbjct: 261 NSDIRVGTALVTMCVRCGDVDSAKQAFKGTADRDVVVYNALIAALAQHGHNVEAFEQYYR 320

Query: 302 LLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNE 361
           + +    +N +T + ++        L     IHS   + G  S+  +  AL ++Y+R  +
Sbjct: 321 MRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGD 380

Query: 362 MEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSA 421
           +  AR+LF    ++ L SWNA+IAGY +     EA+ L+++MQ+  V P  VT   +LSA
Sbjct: 381 LPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSA 440

Query: 422 CAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTW 481
           CA   A + GK +HE +     +SN +++ AL++MY +CG+++EA+ +F+    +  ++W
Sbjct: 441 CANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISW 500

Query: 482 NTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIH 541
           N+MI+G+  HG    A +LF EM +  + P  +TF SVL  C +   +  G +I    I 
Sbjct: 501 NSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQI-HGRIT 559

Query: 542 DHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGAC 591
           + G +        ++++  R G L+ A      L        W A++G C
Sbjct: 560 ESGLQLDVNLGNALINMYIRCGSLQDARNVFHSLQ-HRDVMSWTAMIGGC 608



 Score =  231 bits (588), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 144/505 (28%), Positives = 252/505 (49%), Gaps = 13/505 (2%)

Query: 130 LHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCC 189
           +H   + +  G D+F+   L+++Y K   V  A +VF +MP +D + WNS+IS   +   
Sbjct: 49  IHAQMVEAWVGPDIFLSNLLINMYVKCRSVLDAHQVFKEMPRRDVISWNSLISCYAQQGF 108

Query: 190 FQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLT 249
            + +  +F +M +N G   +  +  ++L A     EL  G +I    +K G+     V  
Sbjct: 109 KKKAFQLFEEM-QNAGFIPNKITYISILTACYSPAELENGKKIHSQIIKAGYQRDPRVQN 167

Query: 250 GLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERV 309
            L+S Y KCG++ RA  +F  I   D++S N M+  Y      +  L LF Q+ +     
Sbjct: 168 SLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYAQKAYVKECLGLFGQMSSEGISP 227

Query: 310 NSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLF 369
           +  T + L+  F     L     IH   ++ G+ S+  V TAL T+  R  ++++A++ F
Sbjct: 228 DKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAF 287

Query: 370 DESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAIS 429
             ++++ +  +NA+IA   Q+G   EA   +  M++  VA N  T  SIL+AC+   A+ 
Sbjct: 288 KGTADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALE 347

Query: 430 LGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYG 489
            GK +H  +      S++ +  ALI MYA+CG++ +ARELF  M  +  ++WN +I+GY 
Sbjct: 348 AGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKARELFYTMPKRDLISWNAIIAGYA 407

Query: 490 LHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLA 549
                 EA++L+ +M   G++P  VTFL +L AC+++    +G  I + ++   G K   
Sbjct: 408 RREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDILRS-GIKSNG 466

Query: 550 EHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLF- 608
                ++++  R G L +A    +G       + W +++     H     A     KLF 
Sbjct: 467 HLANALMNMYRRCGSLMEAQNVFEGTQARDVIS-WNSMIAGHAQHGSYETAY----KLFQ 521

Query: 609 -----ELDPENVGYHVLLSNIYSAE 628
                EL+P+N+ +  +LS   + E
Sbjct: 522 EMQNEELEPDNITFASVLSGCKNPE 546


>gi|125529330|gb|EAY77444.1| hypothetical protein OsI_05438 [Oryza sativa Indica Group]
          Length = 813

 Score =  522 bits (1344), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 284/738 (38%), Positives = 430/738 (58%), Gaps = 13/738 (1%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRK-NTALTPDNFTYSFVLSAA 118
           A  LF  IP PD+  +N +IR +S++    ++   + + R     + P+N+T+ F L A 
Sbjct: 76  AHHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNYTFPFALKAC 135

Query: 119 SACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWN 178
           SA  D   G  +H HAI +G  +DLFV  AL+D+Y K + +  A  +F  MP +D V WN
Sbjct: 136 SALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARDLVAWN 195

Query: 179 SMISGLMKNCCFQDSIWVFGDM-VRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGL 237
           +M++G   +  +  ++     M ++      +++++ A+LP +A+   L  G  +    +
Sbjct: 196 AMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSVHAYRI 255

Query: 238 KLGFH----------DHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYT 287
           +   H          D V + T L+  Y+KCG +  A  +F  +   + ++ +A+I G+ 
Sbjct: 256 RACLHSNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFV 315

Query: 288 CNGKTESSLRLFRQLLASAE-RVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNS 346
              +   +  LF+ +LA     ++ ++I   +       HL +   +H+   KSG+ ++ 
Sbjct: 316 LCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHALLAKSGVHADL 375

Query: 347 SVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQAS 406
           +   +L ++Y++   ++ A  LFDE + K   S++A+++GY QNG  EEA  +F++MQA 
Sbjct: 376 TAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQAC 435

Query: 407 KVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEA 466
            V P+  T+ S++ AC+ L A+  G+  H  V  R   S   +  ALIDMYAKCG I  +
Sbjct: 436 NVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLS 495

Query: 467 RELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHA 526
           R++F++M  +  V+WNTMI+GYG+HG G EA  LF EM + G  P GVTF+ +L ACSH+
Sbjct: 496 RQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHS 555

Query: 527 GLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGA 586
           GLV EG   F  M H +G  P  EHY CMVD+L R G L++A EFI+ + +     VW A
Sbjct: 556 GLVIEGKHWFHVMRHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVA 615

Query: 587 LLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKL 646
           LLGAC ++K+ +L +  S  + EL PE  G  VLLSNIYSA   + +AA VR + K +  
Sbjct: 616 LLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSAAGRFDEAAEVRIIQKVQGF 675

Query: 647 AKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEE 706
            K+PGC+ IE+ G+ H F  GDQ HPQS  IY  L+ +   +++ G+Q +T   L D+EE
Sbjct: 676 KKSPGCSWIEINGSLHAFVGGDQSHPQSPEIYRELDNILVGIKKLGYQPDTSFVLQDLEE 735

Query: 707 EEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRD 766
           EEKE  +  HSEKLAIA+G+++      I + KNLRVC DCHT  K IS +  R I+VRD
Sbjct: 736 EEKEKALICHSEKLAIAYGILSLSEDKTIFVTKNLRVCGDCHTVIKHISLLKRRAIIVRD 795

Query: 767 ANRFHHFKGGVCSCGDYW 784
           ANRFHHFK G CSCGD+W
Sbjct: 796 ANRFHHFKNGQCSCGDFW 813



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 42/157 (26%), Positives = 71/157 (45%), Gaps = 1/157 (0%)

Query: 27  QTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNE 86
           Q HA +   G   DL+    L    +       A ALF  +   D   ++ ++ G+  N 
Sbjct: 361 QLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNG 420

Query: 87  MPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVG 146
             + +   +  ++    + PD  T   ++ A S       G   HG  I+ G  S+  + 
Sbjct: 421 RAEEAFLVFKKMQACN-VEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSIC 479

Query: 147 AALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISG 183
            AL+D+Y K   +  +R+VF+ MP +D V WN+MI+G
Sbjct: 480 NALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAG 516


>gi|334185294|ref|NP_187883.2| mitochondrial editing factor 22 [Arabidopsis thaliana]
 gi|75274142|sp|Q9LTV8.1|PP224_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g12770
 gi|11994419|dbj|BAB02421.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|332641723|gb|AEE75244.1| mitochondrial editing factor 22 [Arabidopsis thaliana]
          Length = 694

 Score =  522 bits (1344), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 265/689 (38%), Positives = 407/689 (59%), Gaps = 8/689 (1%)

Query: 98  LRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFS 157
           L  N+ +  D+F  S + SA      + I    H   +V G     F+   L+     F 
Sbjct: 12  LYTNSGIHSDSFYASLIDSATHKAQLKQI----HARLLVLGLQFSGFLITKLIHASSSFG 67

Query: 158 WVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVL 217
            +  AR+VFD +P      WN++I G  +N  FQD++ ++ +M +      DS +   +L
Sbjct: 68  DITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNM-QLARVSPDSFTFPHLL 126

Query: 218 PAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPD-- 275
            A + +  L++G  +     +LGF   V+V  GL++ Y+KC  +  A  +F  +  P+  
Sbjct: 127 KACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERT 186

Query: 276 LISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHS 335
           ++S  A++S Y  NG+   +L +F Q+     + +   +V ++  F     L     IH+
Sbjct: 187 IVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHA 246

Query: 336 FCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEE 395
             +K G+     +L +L+T+Y++  ++  A+ LFD+    +L  WNAMI+GY +NG   E
Sbjct: 247 SVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYARE 306

Query: 396 AISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALID 455
           AI +F EM    V P+ ++++S +SACAQ+G++   + ++E V   ++  ++++S+ALID
Sbjct: 307 AIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALID 366

Query: 456 MYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVT 515
           M+AKCG++  AR +FD    +  V W+ MI GYGLHG   EA+ L+  M   G+ P+ VT
Sbjct: 367 MFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVT 426

Query: 516 FLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGL 575
           FL +L AC+H+G+VREG   F  M  DH   P  +HYAC++D+LGRAG L++A E IK +
Sbjct: 427 FLGLLMACNHSGMVREGWWFFNRMA-DHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCM 485

Query: 576 AVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAA 635
            V+PG  VWGALL AC  H+   L   A+++LF +DP N G++V LSN+Y+A R + + A
Sbjct: 486 PVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVA 545

Query: 636 TVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQT 695
            VR  +K++ L K  GC+ +EV G    F  GD+ HP+   I   +E +  +++E GF  
Sbjct: 546 EVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKEGGFVA 605

Query: 696 ETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFIS 755
               +LHD+ +EE E  +  HSE++AIA+GLI+T  GT +RI KNLR C++CH ATK IS
Sbjct: 606 NKDASLHDLNDEEAEETLCSHSERIAIAYGLISTPQGTPLRITKNLRACVNCHAATKLIS 665

Query: 756 KVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           K+  R IVVRD NRFHHFK GVCSCGDYW
Sbjct: 666 KLVDREIVVRDTNRFHHFKDGVCSCGDYW 694



 Score =  248 bits (633), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 157/528 (29%), Positives = 265/528 (50%), Gaps = 18/528 (3%)

Query: 7   QSRNLFLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFS 66
            S + + SL+  A  ++QL Q HA++++ G Q     +TKL H  S F    +AR +F  
Sbjct: 19  HSDSFYASLIDSATHKAQLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDD 78

Query: 67  IPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSI 126
           +P+P +F +N IIRG+S N   + ++  Y++++    ++PD+FT+  +L A S      +
Sbjct: 79  LPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQL-ARVSPDSFTFPHLLKACSGLSHLQM 137

Query: 127 GVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFD--KMPEKDTVLWNSMISGL 184
           G  +H      G+ +D+FV   L+ LY K   + SAR VF+   +PE+  V W +++S  
Sbjct: 138 GRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAY 197

Query: 185 MKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDH 244
            +N    +++ +F  M R      D  ++ +VL A   +Q+L+ G  I    +K+G    
Sbjct: 198 AQNGEPMEALEIFSQM-RKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIE 256

Query: 245 VYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLA 304
             +L  L + Y+KCG+V  A++LF  +  P+LI  NAMISGY  NG    ++ +F +++ 
Sbjct: 257 PDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMIN 316

Query: 305 SAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEA 364
              R ++ +I   I      G L     ++ +  +S    +  + +AL  ++++   +E 
Sbjct: 317 KDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEG 376

Query: 365 ARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQ 424
           AR +FD + ++ +  W+AMI GY  +G   EAISL++ M+   V PN VT   +L AC  
Sbjct: 377 ARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNH 436

Query: 425 LGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVT-WNT 483
            G +  G W    +              +ID+  + G++ +A E+   M  +  VT W  
Sbjct: 437 SGMVREGWWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGA 496

Query: 484 MISGYGLHGH----GLEALQLFSEMLHSGIRPSGVTF---LSVLYACS 524
           ++S    H H       A QLFS      I PS       LS LYA +
Sbjct: 497 LLSACKKHRHVELGEYAAQQLFS------IDPSNTGHYVQLSNLYAAA 538


>gi|18483237|gb|AAL73981.1|AF466201_10 putative vegetative storage protein [Sorghum bicolor]
          Length = 779

 Score =  521 bits (1343), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 282/729 (38%), Positives = 423/729 (58%), Gaps = 5/729 (0%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           AR +F  IP PD   +N +IR +S      ++I  Y  +     + P+ +T+ FVL A S
Sbjct: 52  ARQVFDRIPAPDARAYNALIRAYSWRGPFHAAIDLYRSMLY-FRVPPNKYTFPFVLKACS 110

Query: 120 ACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNS 179
           A  D   G  +H HA   G  +DLFV  AL+DLY + +    A  VF KMP +D V WN+
Sbjct: 111 ALADLCAGRTIHAHAAAVGLHTDLFVSTALIDLYIRCARFGPAANVFAKMPMRDVVAWNA 170

Query: 180 MISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKL 239
           M++G   +  +  +I    DM   GG   +++++ ++LP +A+   L  G  +    L+ 
Sbjct: 171 MLAGYANHGMYHHAIAHLLDMQDRGGLRPNASTLVSLLPLLAQHGALFQGTSVHAYCLRA 230

Query: 240 GF---HDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSL 296
                 + V + T L+  Y+KC  +  A  +F  +   + ++ +A+I G+    +   + 
Sbjct: 231 YLDQNEEQVLIGTALLDMYAKCKHLVYACRVFHGMTVRNEVTWSALIGGFVLCDRMTEAF 290

Query: 297 RLFRQLLASAE-RVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTV 355
            LF+ +L      ++++++   + V      L +   +H+   KSGI ++ +   +L ++
Sbjct: 291 NLFKDMLVEGMCFLSATSVASALRVCASLADLRMGTQLHALLAKSGIHADLTAGNSLLSM 350

Query: 356 YSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTV 415
           Y++   +  A  LFDE + K   S+ A+++GY QNG  EEA  +F++MQA  V P+  T+
Sbjct: 351 YAKAGLINEATMLFDEIAIKDTISYGALLSGYVQNGKAEEAFLVFKKMQACNVQPDIATM 410

Query: 416 SSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSH 475
            S++ AC+ L A+  G+  H  V  R       +  +LIDMYAKCG I  +R++FD M  
Sbjct: 411 VSLIPACSHLAALQHGRCSHGSVIIRGLALETSICNSLIDMYAKCGRIDLSRQVFDKMPA 470

Query: 476 KSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEI 535
           +  V+WNTMI+GYG+HG G EA  LF  M + G  P  VTF+ ++ ACSH+GLV EG   
Sbjct: 471 RDIVSWNTMIAGYGIHGLGKEATTLFLSMKNQGFEPDDVTFICLIAACSHSGLVTEGKHW 530

Query: 536 FQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHK 595
           F +M H +G  P  EHY CMVD+L R G L++A +FI+ + ++    VWGALLGAC IHK
Sbjct: 531 FDTMTHKYGILPRMEHYICMVDLLARGGFLDEAYQFIQSMPLKADVRVWGALLGACRIHK 590

Query: 596 DTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLI 655
           + +L +  S  + +L PE  G  VLLSNI+SA   + +AA VR + K +   K+PGC+ I
Sbjct: 591 NIDLGKQVSRMIQKLGPEGTGNFVLLSNIFSAAGRFDEAAEVRIIQKVKGFKKSPGCSWI 650

Query: 656 EVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKV 715
           E+ G+ H F  GDQ HP S  IY  L+ +   +++ G+Q +T   L D+EEEEKE  +  
Sbjct: 651 EINGSLHAFVGGDQSHPCSPDIYHELDNILIDIKKLGYQADTSFVLQDLEEEEKEKALLY 710

Query: 716 HSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKG 775
           HSEKLAIAFG+++      I + KNLRVC DCHTA K+++ V  R I+VRDANRFHHFK 
Sbjct: 711 HSEKLAIAFGVLSLNEDKTIFVTKNLRVCGDCHTAIKYMTLVRNRTIIVRDANRFHHFKN 770

Query: 776 GVCSCGDYW 784
           G CSCGD+W
Sbjct: 771 GQCSCGDFW 779



 Score =  129 bits (323), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 95/335 (28%), Positives = 161/335 (48%), Gaps = 7/335 (2%)

Query: 259 GEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLI 318
           G++  A  +F  I  PD  + NA+I  Y+  G   +++ L+R +L      N  T   ++
Sbjct: 47  GQLALARQVFDRIPAPDARAYNALIRAYSWRGPFHAAIDLYRSMLYFRVPPNKYTFPFVL 106

Query: 319 PVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLA 378
                   L     IH+     G+ ++  V TAL  +Y R      A  +F +   + + 
Sbjct: 107 KACSALADLCAGRTIHAHAAAVGLHTDLFVSTALIDLYIRCARFGPAANVFAKMPMRDVV 166

Query: 379 SWNAMIAGYTQNGLTEEAISLFQEMQ-ASKVAPNPVTVSSILSACAQLGAISLGKWVHEL 437
           +WNAM+AGY  +G+   AI+   +MQ    + PN  T+ S+L   AQ GA+  G  VH  
Sbjct: 167 AWNAMLAGYANHGMYHHAIAHLLDMQDRGGLRPNASTLVSLLPLLAQHGALFQGTSVHAY 226

Query: 438 VKSRNFESN---IYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHG 494
                 + N   + + TAL+DMYAKC ++V A  +F  M+ ++EVTW+ +I G+ L    
Sbjct: 227 CLRAYLDQNEEQVLIGTALLDMYAKCKHLVYACRVFHGMTVRNEVTWSALIGGFVLCDRM 286

Query: 495 LEALQLFSEMLHSGI-RPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYA 553
            EA  LF +ML  G+   S  +  S L  C+    +R G ++  +++   G         
Sbjct: 287 TEAFNLFKDMLVEGMCFLSATSVASALRVCASLADLRMGTQL-HALLAKSGIHADLTAGN 345

Query: 554 CMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALL 588
            ++ +  +AG + +A      +A++   + +GALL
Sbjct: 346 SLLSMYAKAGLINEATMLFDEIAIKDTIS-YGALL 379



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 63/238 (26%), Positives = 110/238 (46%), Gaps = 14/238 (5%)

Query: 361 EMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILS 420
           ++  AR++FD        ++NA+I  Y+  G    AI L++ M   +V PN  T   +L 
Sbjct: 48  QLALARQVFDRIPAPDARAYNALIRAYSWRGPFHAAIDLYRSMLYFRVPPNKYTFPFVLK 107

Query: 421 ACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVT 480
           AC+ L  +  G+ +H    +    ++++VSTALID+Y +C     A  +F  M  +  V 
Sbjct: 108 ACSALADLCAGRTIHAHAAAVGLHTDLFVSTALIDLYIRCARFGPAANVFAKMPMRDVVA 167

Query: 481 WNTMISGYGLHGHGLEALQLFSEML-HSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSM 539
           WN M++GY  HG    A+    +M    G+RP+  T +S+L   +  G + +G     + 
Sbjct: 168 WNAMLAGYANHGMYHHAIAHLLDMQDRGGLRPNASTLVSLLPLLAQHGALFQG-----TS 222

Query: 540 IHDHGFKPLAEHY-------ACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGA 590
           +H +  +   +           ++D+  +   L  A     G+ V      W AL+G 
Sbjct: 223 VHAYCLRAYLDQNEEQVLIGTALLDMYAKCKHLVYACRVFHGMTVR-NEVTWSALIGG 279



 Score = 65.9 bits (159), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 43/158 (27%), Positives = 70/158 (44%), Gaps = 1/158 (0%)

Query: 26  TQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNN 85
           TQ HA +   G   DL+    L    +       A  LF  I   D   +  ++ G+  N
Sbjct: 326 TQLHALLAKSGIHADLTAGNSLLSMYAKAGLINEATMLFDEIAIKDTISYGALLSGYVQN 385

Query: 86  EMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFV 145
              + +   +  ++    + PD  T   ++ A S       G   HG  I+ G   +  +
Sbjct: 386 GKAEEAFLVFKKMQACN-VQPDIATMVSLIPACSHLAALQHGRCSHGSVIIRGLALETSI 444

Query: 146 GAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISG 183
             +L+D+Y K   +  +R+VFDKMP +D V WN+MI+G
Sbjct: 445 CNSLIDMYAKCGRIDLSRQVFDKMPARDIVSWNTMIAG 482


>gi|328774757|gb|AEB39778.1| pentatricopeptide repeat protein 77 [Funaria hygrometrica]
          Length = 1161

 Score =  521 bits (1343), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 286/783 (36%), Positives = 438/783 (55%), Gaps = 11/783 (1%)

Query: 8    SRNLFLSLLKGAKTQSQLTQTHAQIIIHGFQNDL--STVTKLAHRLSDFKATC----YAR 61
            +R  +LS+L    T   L    A  +IH   +++  S+  ++ + L    A C     AR
Sbjct: 384  NRTTYLSVLNACSTSKALG---AGELIHSHISEVGHSSDVQIGNSLISMYARCGDLPRAR 440

Query: 62   ALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASAC 121
             LF ++PK DL  +N II G++  E    ++  Y  + ++  + P   T+  +LSA +  
Sbjct: 441  ELFNTMPKRDLISWNAIIAGYARREDRGEAMKLYKQM-QSEGVKPGRVTFLHLLSACTNS 499

Query: 122  CDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMI 181
               S G ++H   + SG  S+  +  AL+++Y +   +  A+ VF+    +D + WNSMI
Sbjct: 500  SAYSDGKMIHEDILRSGIKSNGHLANALMNMYRRCGSIMEAQNVFEGTRARDIISWNSMI 559

Query: 182  SGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGF 241
            +G  ++  ++ +  +F +M + G    D  + A+VL      + L LG +I  L ++ G 
Sbjct: 560  AGHAQHGSYEAAYKLFLEMKKEG-LEPDKITFASVLVGCKNPEALELGRQIHMLIIESGL 618

Query: 242  HDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQ 301
               V +   L++ Y +CG ++ A  +F  +   +++S  AMI G+   G+   +  LF Q
Sbjct: 619  QLDVNLGNALINMYIRCGSLQDAYEVFHSLRHRNVMSWTAMIGGFADQGEDRKAFELFWQ 678

Query: 302  LLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNE 361
            +     +   ST   ++        L     + +  L SG   ++ V  AL + YS+   
Sbjct: 679  MQNDGFKPVKSTFSSILKACMSSACLDEGKKVIAHILNSGYELDTGVGNALISAYSKSGS 738

Query: 362  MEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSA 421
            M  ARK+FD+   + + SWN MIAGY QNGL   A+    +MQ   V  N  +  SIL+A
Sbjct: 739  MTDARKVFDKMPNRDIMSWNKMIAGYAQNGLGGTALQFAYQMQEQGVVLNKFSFVSILNA 798

Query: 422  CAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTW 481
            C+   A+  GK VH  +  R  + ++ V  ALI MYAKCG++ EA+E+FD  + K+ VTW
Sbjct: 799  CSSFSALEEGKRVHAEIVKRKMQGDVRVGAALISMYAKCGSLEEAQEVFDNFTEKNVVTW 858

Query: 482  NTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIH 541
            N MI+ Y  HG   +AL  F+ M   GI+P G TF S+L AC+H+GLV EG+ IF S+  
Sbjct: 859  NAMINAYAQHGLASKALDFFNCMDKEGIKPDGSTFTSILSACNHSGLVMEGNRIFSSLES 918

Query: 542  DHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLAR 601
             HG  P  EHY C+V +LGRAG+ ++A   I  +   P  AVW  LLGAC IH +  LA 
Sbjct: 919  QHGLSPTIEHYGCLVGLLGRAGRFQEAETLINQMPFPPDAAVWETLLGACRIHGNVALAE 978

Query: 602  VASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTP 661
             A+    +L+  N   +VLLSN+Y+A   +   A +R+V++ R + K PG + IEV    
Sbjct: 979  HAANNALKLNARNPAVYVLLSNVYAAAGRWDDVAKIRRVMEGRGIRKEPGRSWIEVDNII 1038

Query: 662  HVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLA 721
            H F + D+ HP++  IY  L++L+ +M  AG+  +T   LH++++E +E  +  HSE+LA
Sbjct: 1039 HEFIAADRSHPETAEIYEELKRLSLEMERAGYSPDTQYVLHNLDKEHQETSLCTHSERLA 1098

Query: 722  IAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCG 781
            IA+GL+ T PGT IRI KNLR+C DCHTA+KFISK+ GR I+ RD+NRFH FK G CSC 
Sbjct: 1099 IAYGLLKTPPGTPIRIFKNLRICGDCHTASKFISKLVGREIIARDSNRFHTFKNGKCSCE 1158

Query: 782  DYW 784
            D+W
Sbjct: 1159 DFW 1161



 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 164/625 (26%), Positives = 297/625 (47%), Gaps = 12/625 (1%)

Query: 5   TPQSRNLFLSLLKGAKTQSQLTQT---HAQIIIHGFQNDLSTVTKLAHRLSDFKATCYAR 61
           T  +R  ++ L++    +  L +    HAQ++  G   D+     L +     ++   A 
Sbjct: 78  TETNRAAYVDLVQNCTRKRSLAEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVSDAH 137

Query: 62  ALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASAC 121
            +F  +P+ D+  +N +I  ++     K +   +  + +     P   TY  +L+A  + 
Sbjct: 138 QVFLKMPRRDVISWNSLISCYAQQGFKKKAFQLFEEM-QTAGFIPSKITYISILTACCSP 196

Query: 122 CDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMI 181
            +   G  +H   I +GY  D  V  +L+++Y K   + SAR+VF  +  +D V +N+M+
Sbjct: 197 AELEYGKKIHSKIIEAGYQRDPRVQNSLLNMYGKCEDLPSARQVFSGIYRRDVVSYNTML 256

Query: 182 SGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGF 241
               +    ++ I +FG M   G    D  +   +L A      L  G  I  L +  G 
Sbjct: 257 GLYAQKAYVEECIGLFGQMSSEG-IPPDKVTYINLLDAFTTPSMLDEGKRIHKLAVNEGL 315

Query: 242 HDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQ 301
           +  + V T L + + +CG+V  A+         D++  NA+I+    +G  E +   + Q
Sbjct: 316 NSDIRVGTALATMFVRCGDVAGAKQALEAFADRDVVVYNALIAALAQHGHYEEAFEQYYQ 375

Query: 302 LLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNE 361
           + +    +N +T + ++        L     IHS   + G  S+  +  +L ++Y+R  +
Sbjct: 376 MRSDGVVMNRTTYLSVLNACSTSKALGAGELIHSHISEVGHSSDVQIGNSLISMYARCGD 435

Query: 362 MEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSA 421
           +  AR+LF+   ++ L SWNA+IAGY +     EA+ L+++MQ+  V P  VT   +LSA
Sbjct: 436 LPRARELFNTMPKRDLISWNAIIAGYARREDRGEAMKLYKQMQSEGVKPGRVTFLHLLSA 495

Query: 422 CAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTW 481
           C    A S GK +HE +     +SN +++ AL++MY +CG+I+EA+ +F+    +  ++W
Sbjct: 496 CTNSSAYSDGKMIHEDILRSGIKSNGHLANALMNMYRRCGSIMEAQNVFEGTRARDIISW 555

Query: 482 NTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIH 541
           N+MI+G+  HG    A +LF EM   G+ P  +TF SVL  C +   +  G +I   +I 
Sbjct: 556 NSMIAGHAQHGSYEAAYKLFLEMKKEGLEPDKITFASVLVGCKNPEALELGRQI-HMLII 614

Query: 542 DHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLAR 601
           + G +        ++++  R G L+ A E    L        W A++G      D    R
Sbjct: 615 ESGLQLDVNLGNALINMYIRCGSLQDAYEVFHSLR-HRNVMSWTAMIGG---FADQGEDR 670

Query: 602 VASEKLFELDPENVGYHVLLSNIYS 626
            A E  +++  +N G+  + S   S
Sbjct: 671 KAFELFWQM--QNDGFKPVKSTFSS 693



 Score = 82.4 bits (202), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 46/181 (25%), Positives = 87/181 (48%), Gaps = 1/181 (0%)

Query: 395 EAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALI 454
           E   L    Q      N      ++  C +  +++  K +H  +       +I++S  LI
Sbjct: 65  EREDLSNAYQPRPTETNRAAYVDLVQNCTRKRSLAEAKRIHAQMVEAGVGPDIFLSNLLI 124

Query: 455 DMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGV 514
           +MY KC ++ +A ++F  M  +  ++WN++IS Y   G   +A QLF EM  +G  PS +
Sbjct: 125 NMYVKCRSVSDAHQVFLKMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQTAGFIPSKI 184

Query: 515 TFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKG 574
           T++S+L AC     +  G +I   +I + G++        ++++ G+   L  A +   G
Sbjct: 185 TYISILTACCSPAELEYGKKIHSKII-EAGYQRDPRVQNSLLNMYGKCEDLPSARQVFSG 243

Query: 575 L 575
           +
Sbjct: 244 I 244


>gi|255543164|ref|XP_002512645.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223548606|gb|EEF50097.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 716

 Score =  521 bits (1342), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 277/719 (38%), Positives = 420/719 (58%), Gaps = 4/719 (0%)

Query: 67  IPKPDLFLFNVIIRGFSNNEMPKSSICFYTHL-RKNTALTPDNFTYSFVLSAASACCDRS 125
           +P  +   F  +I+G+  +      +  ++ + R+   L P  FT    L  +  C +  
Sbjct: 1   MPDRNTVSFVTLIQGYVQSFQLDEVVDLFSRVHREGHELNPFVFTTILKLLVSVECAE-- 58

Query: 126 IGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLM 185
           +   LH      G+ S+ FVG AL+D Y     V SAR+ FD +  KD V W  M++   
Sbjct: 59  LAYSLHACIYKLGHESNAFVGTALIDAYAVCGSVNSARQAFDAIACKDMVSWTGMVACYA 118

Query: 186 KNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHV 245
           +N  FQDS+ +F +M R  G   +  + A VL A   ++   +G  +    LK  +   +
Sbjct: 119 ENDRFQDSLQLFAEM-RMVGFNPNHFTFAGVLKACIGLEAFSVGKSVHGCVLKTCYEMDL 177

Query: 246 YVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLAS 305
           YV  GL+  Y+K G+      +F ++ + D+I  + MIS Y  + ++  ++ LF Q+  +
Sbjct: 178 YVGVGLLDLYTKFGDANDVLRVFEEMPKHDVIPWSFMISRYAQSNQSREAVELFGQMRRA 237

Query: 306 AERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAA 365
               N  T   ++       +L L   +H   LK G+  N  V  AL  VY++   ++ +
Sbjct: 238 FVLPNQFTFASVLQSCASIENLQLGKQVHCHVLKVGLDGNVFVSNALMDVYAKCGRLDNS 297

Query: 366 RKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQL 425
            KLF E   ++  +WN MI GY Q+G  ++A+SL++ M   +V  + VT SS+L ACA L
Sbjct: 298 MKLFMELPNRNEVTWNTMIVGYVQSGDGDKALSLYKNMLECQVQASEVTYSSVLRACASL 357

Query: 426 GAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMI 485
            A+ LG  +H L     ++ ++ V  ALIDMYAKCG+I  AR +FD++S + E++WN MI
Sbjct: 358 AAMELGTQIHSLSLKTIYDKDVVVGNALIDMYAKCGSIKNARLVFDMLSERDEISWNAMI 417

Query: 486 SGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGF 545
           SGY +HG   EAL+ F  M  +   P+ +TF+S+L ACS+AGL+  G   F+SM+ D+G 
Sbjct: 418 SGYSMHGLVGEALKAFQMMQETECVPNKLTFVSILSACSNAGLLDIGQNYFKSMVQDYGI 477

Query: 546 KPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASE 605
           +P  EHY CMV +LGR+G L+KA++ I+ + +EP   VW ALLGAC+IH D +L  ++++
Sbjct: 478 EPCMEHYTCMVWLLGRSGHLDKAVKLIEEIPLEPNVKVWRALLGACVIHNDVDLGIMSAQ 537

Query: 606 KLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFT 665
           ++ ++DP++   HVLLSNIY+  R +   A+VR+ +K + + K PG + IE  G  H F+
Sbjct: 538 QILQIDPQDEATHVLLSNIYARTRRWNSVASVRKFMKNKGVKKEPGLSWIENQGIVHYFS 597

Query: 666 SGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFG 725
            GD  HP    I  MLE LN K  +AG+  +    L DVE++EK+  + VHSE+LA+AFG
Sbjct: 598 VGDTSHPDMKMISGMLEWLNMKTEKAGYVPDLNAVLRDVEDDEKKRHLWVHSERLALAFG 657

Query: 726 LIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           LI T     IRI+KNLR+C DCH+A K ISK+  R I++RD NRFHHF+ G+CSCGDYW
Sbjct: 658 LIRTPSRGHIRILKNLRICTDCHSAIKLISKIVQRDIIIRDMNRFHHFQDGICSCGDYW 716


>gi|449479821|ref|XP_004155717.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Cucumis sativus]
          Length = 745

 Score =  521 bits (1341), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 268/712 (37%), Positives = 420/712 (58%), Gaps = 23/712 (3%)

Query: 75  FNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHA 134
           +N++I  ++NN +P++S   Y H+R N A   DNF    +L A +      +G  LHG A
Sbjct: 55  YNLLISSYTNNHLPQASFNCYLHMRSNDAAALDNFILPSLLKACAQASSGDLGRELHGFA 114

Query: 135 IVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSI 194
             +G+ SD+FV  AL+++Y K   + SAR VFD+MPE+D V W +M+   +++  F +++
Sbjct: 115 QKNGFASDVFVCNALMNMYEKCGCLVSARLVFDQMPERDVVSWTTMLGCYVRSKAFGEAL 174

Query: 195 WVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLK-LGFHD-HVYVLTGLV 252
            +  +M +  G  L   ++ +++     + +++ G  +    ++ +G     V + T L+
Sbjct: 175 RLVREM-QFVGVKLSGVALISLIAVFGNLLDMKSGRAVHGYIVRNVGDEKMEVSMTTALI 233

Query: 253 SFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSS 312
             Y K G +  A+ LF  + +  ++S   MI+G   + + +   + F ++L      N  
Sbjct: 234 DMYCKGGCLASAQRLFDRLSKRSVVSWTVMIAGCIRSCRLDEGAKNFNRMLEEKLFPNEI 293

Query: 313 TIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDES 372
           T++ LI      G L L    H++ L++G   + +++TAL  +Y +  ++  AR LF+  
Sbjct: 294 TLLSLITECGFVGTLDLGKWFHAYLLRNGFGMSLALVTALIDMYGKCGQVGYARALFNGV 353

Query: 373 SEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGK 432
            +K +  W+ +I+ Y      ++  +LF EM  + V PN VT+ S+LS CA+ GA+ LGK
Sbjct: 354 KKKDVKIWSVLISAYAHVSCMDQVFNLFVEMLNNDVKPNNVTMVSLLSLCAEAGALDLGK 413

Query: 433 WVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHG 492
           W H  +     E ++ + TALI+MYAKCG++  AR LF+    +    WNTM++G+ +HG
Sbjct: 414 WTHAYINRHGLEVDVILETALINMYAKCGDVTIARSLFNEAMQRDIRMWNTMMAGFSMHG 473

Query: 493 HGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHY 552
            G EAL+LFSEM   G+ P+ +TF+S+ +ACSH+GL+                    EHY
Sbjct: 474 CGKEALELFSEMESHGVEPNDITFVSIFHACSHSGLM--------------------EHY 513

Query: 553 ACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDP 612
            C+VD+LGRAG L++A   I+ + + P   +WGALL AC +HK+  L  VA+ K+ ELDP
Sbjct: 514 GCLVDLLGRAGHLDEAHNIIENMPMRPNTIIWGALLAACKLHKNLALGEVAARKILELDP 573

Query: 613 ENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHP 672
           +N GY VL SNIY++ + +    +VR+ +    + K PG + IEV G+ H F SGD+   
Sbjct: 574 QNCGYSVLKSNIYASAKRWNDVTSVREAMSHSGMKKEPGLSWIEVSGSVHHFKSGDKACT 633

Query: 673 QSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPG 732
           Q+T +Y M+ ++  K+RE+G+   T   L +++EEEKE  +  HSEKLA AFGLI+T PG
Sbjct: 634 QTTKVYEMVTEMCIKLRESGYTPNTAAVLLNIDEEEKESALSYHSEKLATAFGLISTAPG 693

Query: 733 TEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           T IRI+KNLR+C DCH ATK +SK+ GR I+VRD NRFHHF  G CSC  YW
Sbjct: 694 TPIRIVKNLRICDDCHAATKLLSKIYGRTIIVRDRNRFHHFSEGYCSCMGYW 745



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 45/176 (25%), Positives = 88/176 (50%), Gaps = 1/176 (0%)

Query: 29  HAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNEMP 88
           HA ++ +GF   L+ VT L           YARALF  + K D+ +++V+I  +++    
Sbjct: 315 HAYLLRNGFGMSLALVTALIDMYGKCGQVGYARALFNGVKKKDVKIWSVLISAYAHVSCM 374

Query: 89  KSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAA 148
                 +  +  N  + P+N T   +LS  +      +G   H +    G   D+ +  A
Sbjct: 375 DQVFNLFVEMLNND-VKPNNVTMVSLLSLCAEAGALDLGKWTHAYINRHGLEVDVILETA 433

Query: 149 LVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNG 204
           L+++Y K   V  AR +F++  ++D  +WN+M++G   + C ++++ +F +M  +G
Sbjct: 434 LINMYAKCGDVTIARSLFNEAMQRDIRMWNTMMAGFSMHGCGKEALELFSEMESHG 489



 Score = 46.2 bits (108), Expect = 0.075,   Method: Compositional matrix adjust.
 Identities = 37/157 (23%), Positives = 74/157 (47%), Gaps = 21/157 (13%)

Query: 28  THAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNEM 87
           THA I  HG + D+   T L +  +       AR+LF    + D+ ++N ++ GFS +  
Sbjct: 415 THAYINRHGLEVDVILETALINMYAKCGDVTIARSLFNEAMQRDIRMWNTMMAGFSMHGC 474

Query: 88  PKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGA 147
            K ++  ++ +  +  + P++ T+  +  A    C  S G++ H       YG       
Sbjct: 475 GKEALELFSEMESH-GVEPNDITFVSIFHA----CSHS-GLMEH-------YG------- 514

Query: 148 ALVDLYFKFSWVKSARKVFDKMPEK-DTVLWNSMISG 183
            LVDL  +   +  A  + + MP + +T++W ++++ 
Sbjct: 515 CLVDLLGRAGHLDEAHNIIENMPMRPNTIIWGALLAA 551


>gi|328774759|gb|AEB39779.1| pentatricopeptide repeat protein 98 [Funaria hygrometrica]
          Length = 980

 Score =  520 bits (1340), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 278/766 (36%), Positives = 442/766 (57%), Gaps = 3/766 (0%)

Query: 19  AKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVI 78
           AK   +  +  + I+  G+  DL   T L +          A  +F ++P+ DL  +  +
Sbjct: 218 AKNVDKGGELFSLILNAGWDTDLFVGTALINMHIKCGGVDDALKVFNNLPRRDLITWTSM 277

Query: 79  IRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSG 138
           I G + +   K + C    + +   + PD   +  +L A +       G  +H      G
Sbjct: 278 ITGLARHRQFKQA-CNLFQVMEEEGVQPDKVAFVSLLKACNHPEALEQGKRVHARMKEVG 336

Query: 139 YGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFG 198
             ++++VG AL+ +Y K   ++ A +VF+ +  ++ V W +MI+G  ++   +++   F 
Sbjct: 337 LDTEIYVGTALLSMYTKCGSMEDALEVFNLVKGRNVVSWTAMIAGFAQHGRMEEAFLFFN 396

Query: 199 DMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKC 258
            M+ +G    +  +  ++L A +    L+ G +I    +K G+     V T L+S Y+KC
Sbjct: 397 KMIESG-IEPNRVTFMSILGACSRPSALKQGRQIHDRIIKAGYITDDRVRTALLSMYAKC 455

Query: 259 GEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLI 318
           G +  A  +F  I + ++++ NAMI+ Y  + K ++++  F+ LL    + +SST   ++
Sbjct: 456 GSLMDARNVFERISKQNVVAWNAMITAYVQHEKYDNAVATFQALLKEGIKPDSSTFTSIL 515

Query: 319 PVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLA 378
            V      L L   + S  +++G  S+  +  AL +++    ++ +A  LF++  E+ L 
Sbjct: 516 NVCKSPDALELGKWVQSLIIRAGFESDLHIRNALVSMFVNCGDLMSAMNLFNDMPERDLV 575

Query: 379 SWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELV 438
           SWN +IAG+ Q+G  + A   F+ MQ S V P+ +T + +L+ACA   A++ G+ +H L+
Sbjct: 576 SWNTIIAGFVQHGENQFAFDYFKMMQESGVKPDQITFTGLLNACASPEALTEGRRLHALI 635

Query: 439 KSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEAL 498
                + ++ V T LI MY KCG+I +A  +F  +  K+  +W +MI+GY  HG G EAL
Sbjct: 636 TEAALDCDVVVGTGLISMYTKCGSIDDAHLVFHNLPKKNVYSWTSMITGYAQHGRGKEAL 695

Query: 499 QLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDI 558
           +LF +M   G++P  +TF+  L AC+HAGL++EG   F+SM  D   +P  EHY CMVD+
Sbjct: 696 ELFCQMQQEGVKPDWITFVGALSACAHAGLIKEGLHHFESM-KDFNIEPRMEHYGCMVDL 754

Query: 559 LGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYH 618
            GRAG L +A+EFI  + V+P   +WGALLGAC +H D  LA   ++K  ELDP + G +
Sbjct: 755 FGRAGLLHEAVEFINKMQVKPDSRLWGALLGACQVHLDVELAEKVAQKKLELDPNDDGVY 814

Query: 619 VLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIY 678
           V+LSNIY+A   + +   +R+V+  R + K PG + IEV G  H+F S D+ HPQ   I+
Sbjct: 815 VILSNIYAAAGMWKEVTKMRKVMLDRGVVKKPGQSWIEVDGRVHIFCSDDKTHPQIEEIH 874

Query: 679 AMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRII 738
           A L +L+ +M++ G+  +T   LHDVE+ EKE  +  HSE+LAIA+GL+ T P T I I 
Sbjct: 875 AELGRLHMEMKKLGYVPDTRYVLHDVEDSEKEHALCHHSERLAIAYGLLKTPPLTPIVIS 934

Query: 739 KNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           KNLRVC DCHTATK ISK+T R I+ RD+NRFHHFK GVCSCGD+W
Sbjct: 935 KNLRVCGDCHTATKLISKITKRQIIARDSNRFHHFKDGVCSCGDFW 980



 Score =  269 bits (687), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 147/526 (27%), Positives = 273/526 (51%), Gaps = 2/526 (0%)

Query: 7   QSRNLFLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFS 66
           Q+ +  L L    K      + H  I     Q D+     L    +    T  A+ +F  
Sbjct: 105 QTYSSLLQLCIKHKNLGDGERIHNHIKFSKIQPDIFMWNMLISMYAKCGNTNSAKQIFDE 164

Query: 67  IPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSI 126
           +P  D++ +N+++ G+  +   + +   +  + ++  + PD +T+ ++L+A +   +   
Sbjct: 165 MPDKDVYSWNLLLGGYVQHRRYEEAFRLHEQMVQD-GVKPDKYTFVYMLNACADAKNVDK 223

Query: 127 GVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMK 186
           G  L    + +G+ +DLFVG AL++++ K   V  A KVF+ +P +D + W SMI+GL +
Sbjct: 224 GGELFSLILNAGWDTDLFVGTALINMHIKCGGVDDALKVFNNLPRRDLITWTSMITGLAR 283

Query: 187 NCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVY 246
           +  F+ +  +F  ++   G   D  +  ++L A    + L  G  +     ++G    +Y
Sbjct: 284 HRQFKQACNLF-QVMEEEGVQPDKVAFVSLLKACNHPEALEQGKRVHARMKEVGLDTEIY 342

Query: 247 VLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASA 306
           V T L+S Y+KCG +E A  +F  +   +++S  AMI+G+  +G+ E +   F +++ S 
Sbjct: 343 VGTALLSMYTKCGSMEDALEVFNLVKGRNVVSWTAMIAGFAQHGRMEEAFLFFNKMIESG 402

Query: 307 ERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAAR 366
              N  T + ++        L     IH   +K+G +++  V TAL ++Y++   +  AR
Sbjct: 403 IEPNRVTFMSILGACSRPSALKQGRQIHDRIIKAGYITDDRVRTALLSMYAKCGSLMDAR 462

Query: 367 KLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLG 426
            +F+  S++++ +WNAMI  Y Q+   + A++ FQ +    + P+  T +SIL+ C    
Sbjct: 463 NVFERISKQNVVAWNAMITAYVQHEKYDNAVATFQALLKEGIKPDSSTFTSILNVCKSPD 522

Query: 427 AISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMIS 486
           A+ LGKWV  L+    FES++++  AL+ M+  CG+++ A  LF+ M  +  V+WNT+I+
Sbjct: 523 ALELGKWVQSLIIRAGFESDLHIRNALVSMFVNCGDLMSAMNLFNDMPERDLVSWNTIIA 582

Query: 487 GYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREG 532
           G+  HG    A   F  M  SG++P  +TF  +L AC+    + EG
Sbjct: 583 GFVQHGENQFAFDYFKMMQESGVKPDQITFTGLLNACASPEALTEG 628



 Score =  135 bits (340), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 87/347 (25%), Positives = 169/347 (48%), Gaps = 10/347 (2%)

Query: 280 NAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLK 339
           NA ++  +  G+   ++ +   + +   +++  T   L+ +     +L     IH+    
Sbjct: 73  NAFLNRLSKAGQLSEAMLVLLSVDSPHIQIHRQTYSSLLQLCIKHKNLGDGERIHNHIKF 132

Query: 340 SGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISL 399
           S I  +  +   L ++Y++     +A+++FDE  +K + SWN ++ GY Q+   EEA  L
Sbjct: 133 SKIQPDIFMWNMLISMYAKCGNTNSAKQIFDEMPDKDVYSWNLLLGGYVQHRRYEEAFRL 192

Query: 400 FQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAK 459
            ++M    V P+  T   +L+ACA    +  G  +  L+ +  ++++++V TALI+M+ K
Sbjct: 193 HEQMVQDGVKPDKYTFVYMLNACADAKNVDKGGELFSLILNAGWDTDLFVGTALINMHIK 252

Query: 460 CGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSV 519
           CG + +A ++F+ +  +  +TW +MI+G   H    +A  LF  M   G++P  V F+S+
Sbjct: 253 CGGVDDALKVFNNLPRRDLITWTSMITGLARHRQFKQACNLFQVMEEEGVQPDKVAFVSL 312

Query: 520 LYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALE---FIKGLA 576
           L AC+H   + +G  +   M  + G          ++ +  + G +E ALE    +KG  
Sbjct: 313 LKACNHPEALEQGKRVHARM-KEVGLDTEIYVGTALLSMYTKCGSMEDALEVFNLVKGRN 371

Query: 577 VEPGPAVWGALLGACMIHKDTNLARVASEKLFE--LDPENVGYHVLL 621
           V      W A++     H     A +   K+ E  ++P  V +  +L
Sbjct: 372 V----VSWTAMIAGFAQHGRMEEAFLFFNKMIESGIEPNRVTFMSIL 414


>gi|297829702|ref|XP_002882733.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297328573|gb|EFH58992.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 620

 Score =  520 bits (1340), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 260/610 (42%), Positives = 385/610 (63%), Gaps = 9/610 (1%)

Query: 177 WNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLG 236
           WN  +  L     F +SI ++  M+R+G +  D+ S   +L + A +     G ++ C  
Sbjct: 18  WNVRLRELAYQSLFTESISLYRSMLRSGSS-PDAFSFPFILKSCASLSLPVSGQQLHCHV 76

Query: 237 LKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISC--NAMISGYTCNGKTES 294
           ++ G     +VLT L+S Y KCG VE A  +F +      +    NA+ISGYT N K   
Sbjct: 77  IRGGCEAEPFVLTALISMYCKCGLVEDARKVFEENPHSSQLGVCYNALISGYTANSKVSD 136

Query: 295 SLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALST 354
           +  +FR++  +   V+S TI+GL+P+     +L L   +H  C+K G  S  +VL +  T
Sbjct: 137 AAFMFRRMKETGVSVDSVTILGLVPLCTVPEYLWLGRSLHGECVKGGTYSEVAVLNSFIT 196

Query: 355 VYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVT 414
           +Y +   +E+ R+LFDE   K L +WNA+I+GY+QNGL  + + LF++M++S V P+P T
Sbjct: 197 MYMKCGSVESGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELFEQMKSSGVCPDPFT 256

Query: 415 VSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMS 474
           + S+LS+CA LGA  +G+ V ELV++  F  N+++S ALI MYA+CGN+ +AR +FD+M 
Sbjct: 257 LVSVLSSCAHLGAKKIGQEVGELVEANGFAPNVFLSNALISMYARCGNLAKARAVFDIMP 316

Query: 475 HKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDE 534
            KS V+W  MI  YG+HG G   L LF +M+  GIRP G  F+ VL ACSH+GL  +G E
Sbjct: 317 VKSLVSWTAMIGCYGMHGMGETGLTLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLE 376

Query: 535 IFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIH 594
           +F++M  ++  +P  EHY+C+VD+LGRAG+L++A+EFI  + VEP  AVWGALLGAC IH
Sbjct: 377 LFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIDSMPVEPDGAVWGALLGACKIH 436

Query: 595 KDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTL 654
           K+ ++A +A  K+ E +P N+GY+VL+SNIYS  ++      +R ++++R   K PG + 
Sbjct: 437 KNVDMAELAFAKVIEFEPMNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKPGYSY 496

Query: 655 IEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMK 714
           +E  G  H+F +GD+ H Q+  ++ ML++L   + E     +          EE     +
Sbjct: 497 VEHKGKVHLFLAGDRSHEQTEEVHRMLDELETSVMELAGNMDCDRG------EEVSSTTR 550

Query: 715 VHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFK 774
            HSE+LAIAFG++ + PGTEI +IKNLRVC DCH   K +SK+  R  VVRDA+RFH+FK
Sbjct: 551 EHSERLAIAFGILNSIPGTEILVIKNLRVCEDCHVFIKLVSKIVDRRFVVRDASRFHYFK 610

Query: 775 GGVCSCGDYW 784
            GVCSC DYW
Sbjct: 611 DGVCSCKDYW 620



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 119/421 (28%), Positives = 201/421 (47%), Gaps = 6/421 (1%)

Query: 75  FNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHA 134
           +NV +R  +   +   SI  Y  + ++ + +PD F++ F+L + ++      G  LH H 
Sbjct: 18  WNVRLRELAYQSLFTESISLYRSMLRSGS-SPDAFSFPFILKSCASLSLPVSGQQLHCHV 76

Query: 135 IVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDT--VLWNSMISGLMKNCCFQD 192
           I  G  ++ FV  AL+ +Y K   V+ ARKVF++ P      V +N++ISG   N    D
Sbjct: 77  IRGGCEAEPFVLTALISMYCKCGLVEDARKVFEENPHSSQLGVCYNALISGYTANSKVSD 136

Query: 193 SIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLV 252
           + ++F  M +  G  +DS ++  ++P     + L LG  +    +K G +  V VL   +
Sbjct: 137 AAFMFRRM-KETGVSVDSVTILGLVPLCTVPEYLWLGRSLHGECVKGGTYSEVAVLNSFI 195

Query: 253 SFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSS 312
           + Y KCG VE    LF ++    LI+ NA+ISGY+ NG     L LF Q+ +S    +  
Sbjct: 196 TMYMKCGSVESGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELFEQMKSSGVCPDPF 255

Query: 313 TIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDES 372
           T+V ++      G   +   +      +G   N  +  AL ++Y+R   +  AR +FD  
Sbjct: 256 TLVSVLSSCAHLGAKKIGQEVGELVEANGFAPNVFLSNALISMYARCGNLAKARAVFDIM 315

Query: 373 SEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLG- 431
             KSL SW AMI  Y  +G+ E  ++LF +M    + P+      +LSAC+  G    G 
Sbjct: 316 PVKSLVSWTAMIGCYGMHGMGETGLTLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGL 375

Query: 432 KWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSE-VTWNTMISGYGL 490
           +    + +    E      + L+D+  + G + EA E  D M  + +   W  ++    +
Sbjct: 376 ELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIDSMPVEPDGAVWGALLGACKI 435

Query: 491 H 491
           H
Sbjct: 436 H 436



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 77/291 (26%), Positives = 136/291 (46%), Gaps = 4/291 (1%)

Query: 27  QTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLF--LFNVIIRGFSN 84
           Q H  +I  G + +   +T L            AR +F   P        +N +I G++ 
Sbjct: 71  QLHCHVIRGGCEAEPFVLTALISMYCKCGLVEDARKVFEENPHSSQLGVCYNALISGYTA 130

Query: 85  NEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLF 144
           N    S   F     K T ++ D+ T   ++   +      +G  LHG  +  G  S++ 
Sbjct: 131 NS-KVSDAAFMFRRMKETGVSVDSVTILGLVPLCTVPEYLWLGRSLHGECVKGGTYSEVA 189

Query: 145 VGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNG 204
           V  + + +Y K   V+S R++FD+MP K  + WN++ISG  +N    D + +F  M ++ 
Sbjct: 190 VLNSFITMYMKCGSVESGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELFEQM-KSS 248

Query: 205 GTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERA 264
           G   D  ++ +VL + A +   ++G E+  L    GF  +V++   L+S Y++CG + +A
Sbjct: 249 GVCPDPFTLVSVLSSCAHLGAKKIGQEVGELVEANGFAPNVFLSNALISMYARCGNLAKA 308

Query: 265 ELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIV 315
             +F  +    L+S  AMI  Y  +G  E+ L LF  ++    R + +  V
Sbjct: 309 RAVFDIMPVKSLVSWTAMIGCYGMHGMGETGLTLFDDMIKRGIRPDGAVFV 359



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 51/158 (32%), Positives = 81/158 (51%), Gaps = 2/158 (1%)

Query: 369 FDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAI 428
           F  +S  +  SWN  +       L  E+ISL++ M  S  +P+  +   IL +CA L   
Sbjct: 7   FVRNSAVASTSWNVRLRELAYQSLFTESISLYRSMLRSGSSPDAFSFPFILKSCASLSLP 66

Query: 429 SLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSE--VTWNTMIS 486
             G+ +H  V     E+  +V TALI MY KCG + +AR++F+   H S+  V +N +IS
Sbjct: 67  VSGQQLHCHVIRGGCEAEPFVLTALISMYCKCGLVEDARKVFEENPHSSQLGVCYNALIS 126

Query: 487 GYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACS 524
           GY  +    +A  +F  M  +G+    VT L ++  C+
Sbjct: 127 GYTANSKVSDAAFMFRRMKETGVSVDSVTILGLVPLCT 164


>gi|357495039|ref|XP_003617808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355519143|gb|AET00767.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 811

 Score =  520 bits (1340), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 282/727 (38%), Positives = 425/727 (58%), Gaps = 6/727 (0%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHL-RKNTALTPDNFTYSFVLSAA 118
           A  LF  +P+ +   F  + +G+S +     ++ F   + ++   + P  F ++ +L   
Sbjct: 89  ASKLFDEMPQTNTISFVTLAQGYSRDHQFHQALHFILRIFKEGHEVNP--FVFTTLLKLL 146

Query: 119 SACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWN 178
            +     +   LH      G+ +D FVG AL+D Y     V  AR VFD +  KD V W 
Sbjct: 147 VSMDLAHLCWTLHACVYKLGHHADAFVGTALIDAYSVRGNVDVARHVFDDICCKDMVSWT 206

Query: 179 SMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLK 238
            M++   +NC +++S+ +F  M R  G   ++ +++  L +   ++   +G  +    LK
Sbjct: 207 GMVACYAENCFYEESLQLFNQM-RIMGYKPNNFTISGALKSCLGLEAFNVGKSVHGCALK 265

Query: 239 LGFHDH-VYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLR 297
            G +DH ++V   L+  Y+K GE+  A+ LF ++ + DLI  + MI+ Y  + +++ +L 
Sbjct: 266 -GCYDHDLFVGIALLELYAKSGEIIDAQRLFEEMPKTDLIPWSLMIARYAQSDRSKEALD 324

Query: 298 LFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYS 357
           LF ++  ++   N+ T   ++        L L   IHS  LK G+ SN  V  A+  VY+
Sbjct: 325 LFLRMRQTSVVPNNFTFASVLQACASSVSLDLGKQIHSCVLKFGLNSNVFVSNAIMDVYA 384

Query: 358 RLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSS 417
           +  E+E + KLF+E  +++  +WN +I GY Q G  E A++LF  M    + P  VT SS
Sbjct: 385 KCGEIENSMKLFEELPDRNDVTWNTIIVGYVQLGDGERAMNLFTHMLEHDMQPTEVTYSS 444

Query: 418 ILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKS 477
           +L A A L A+  G  +H L     +  +  V+ +LIDMYAKCG I +AR  FD M+ + 
Sbjct: 445 VLRASASLAALEPGLQIHSLTIKTMYNKDTVVANSLIDMYAKCGRINDARLTFDKMNKRD 504

Query: 478 EVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQ 537
           EV+WN MI GY +HG  +EAL LF  M H+  +P+ +TF+ VL ACS+AGL+ +G   F+
Sbjct: 505 EVSWNAMICGYSMHGMSMEALNLFDMMQHTDCKPNKLTFVGVLSACSNAGLLYKGQAHFE 564

Query: 538 SMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDT 597
           SM  D+  KP  EHY CMV +LGR G+ ++A++ I  +A +P   VW ALLGAC+IHK  
Sbjct: 565 SMSKDYDIKPCIEHYTCMVWLLGRLGRFDEAMKLIGEIAYQPSVMVWRALLGACVIHKKV 624

Query: 598 NLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEV 657
           +L RV ++ + E++P +   HVLLSN+Y+    +   A VR+ ++K+K+ K PG + +E 
Sbjct: 625 DLGRVCAQHVLEMEPHDDATHVLLSNMYATAGRWDNVAFVRKYMQKKKVRKEPGLSWVEN 684

Query: 658 GGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHS 717
            G  H F+ GD  HP    I AMLE LN K R+AG+  +    L DV+++EKE  + VHS
Sbjct: 685 QGVVHYFSVGDTSHPDIKLICAMLEWLNKKTRDAGYVPDCNAVLLDVQDDEKERHLWVHS 744

Query: 718 EKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGV 777
           E+LA+A+GLI T     IRIIKNLR+C+DCHT  K ISKV  R IV+RD NRFHHF+ GV
Sbjct: 745 ERLALAYGLIRTPLSCSIRIIKNLRICIDCHTVMKLISKVVQREIVIRDINRFHHFRHGV 804

Query: 778 CSCGDYW 784
           CSCGDYW
Sbjct: 805 CSCGDYW 811



 Score =  211 bits (538), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 129/413 (31%), Positives = 215/413 (52%), Gaps = 1/413 (0%)

Query: 123 DRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMIS 182
           D   G  LH H +  G   DLF    L++ Y + + ++ A K+FD+MP+ +T+ + ++  
Sbjct: 50  DPIAGKHLHCHILKRGTSLDLFAQNILLNFYVQSNSLQDASKLFDEMPQTNTISFVTLAQ 109

Query: 183 GLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFH 242
           G  ++  F  ++     + + G   ++      +L  +  +    L   +     KLG H
Sbjct: 110 GYSRDHQFHQALHFILRIFKEGHE-VNPFVFTTLLKLLVSMDLAHLCWTLHACVYKLGHH 168

Query: 243 DHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQL 302
              +V T L+  YS  G V+ A  +F DI   D++S   M++ Y  N   E SL+LF Q+
Sbjct: 169 ADAFVGTALIDAYSVRGNVDVARHVFDDICCKDMVSWTGMVACYAENCFYEESLQLFNQM 228

Query: 303 LASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEM 362
                + N+ TI G +         ++   +H   LK     +  V  AL  +Y++  E+
Sbjct: 229 RIMGYKPNNFTISGALKSCLGLEAFNVGKSVHGCALKGCYDHDLFVGIALLELYAKSGEI 288

Query: 363 EAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSAC 422
             A++LF+E  +  L  W+ MIA Y Q+  ++EA+ LF  M+ + V PN  T +S+L AC
Sbjct: 289 IDAQRLFEEMPKTDLIPWSLMIARYAQSDRSKEALDLFLRMRQTSVVPNNFTFASVLQAC 348

Query: 423 AQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWN 482
           A   ++ LGK +H  V      SN++VS A++D+YAKCG I  + +LF+ +  +++VTWN
Sbjct: 349 ASSVSLDLGKQIHSCVLKFGLNSNVFVSNAIMDVYAKCGEIENSMKLFEELPDRNDVTWN 408

Query: 483 TMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEI 535
           T+I GY   G G  A+ LF+ ML   ++P+ VT+ SVL A +    +  G +I
Sbjct: 409 TIIVGYVQLGDGERAMNLFTHMLEHDMQPTEVTYSSVLRASASLAALEPGLQI 461



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 103/382 (26%), Positives = 183/382 (47%), Gaps = 3/382 (0%)

Query: 208 LDSTSVAAVLPAVAEV-QELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAEL 266
           LDS S A +L  +     +   G  + C  LK G    ++    L++FY +   ++ A  
Sbjct: 32  LDSHSYAHMLQQIIRNGADPIAGKHLHCHILKRGTSLDLFAQNILLNFYVQSNSLQDASK 91

Query: 267 LFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGH 326
           LF ++ + + IS   +  GY+ + +   +L    ++      VN      L+ +      
Sbjct: 92  LFDEMPQTNTISFVTLAQGYSRDHQFHQALHFILRIFKEGHEVNPFVFTTLLKLLVSMDL 151

Query: 327 LHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAG 386
            HL   +H+   K G  +++ V TAL   YS    ++ AR +FD+   K + SW  M+A 
Sbjct: 152 AHLCWTLHACVYKLGHHADAFVGTALIDAYSVRGNVDVARHVFDDICCKDMVSWTGMVAC 211

Query: 387 YTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESN 446
           Y +N   EE++ LF +M+     PN  T+S  L +C  L A ++GK VH       ++ +
Sbjct: 212 YAENCFYEESLQLFNQMRIMGYKPNNFTISGALKSCLGLEAFNVGKSVHGCALKGCYDHD 271

Query: 447 IYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLH 506
           ++V  AL+++YAK G I++A+ LF+ M     + W+ MI+ Y       EAL LF  M  
Sbjct: 272 LFVGIALLELYAKSGEIIDAQRLFEEMPKTDLIPWSLMIARYAQSDRSKEALDLFLRMRQ 331

Query: 507 SGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLE 566
           + + P+  TF SVL AC+ +  +  G +I  S +   G          ++D+  + G++E
Sbjct: 332 TSVVPNNFTFASVLQACASSVSLDLGKQI-HSCVLKFGLNSNVFVSNAIMDVYAKCGEIE 390

Query: 567 KALEFIKGLAVEPGPAVWGALL 588
            +++  + L  +     W  ++
Sbjct: 391 NSMKLFEELP-DRNDVTWNTII 411


>gi|359486639|ref|XP_002284011.2| PREDICTED: pentatricopeptide repeat-containing protein At2g39620-like
            [Vitis vinifera]
          Length = 1005

 Score =  520 bits (1340), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 285/759 (37%), Positives = 432/759 (56%), Gaps = 13/759 (1%)

Query: 34   IHG--FQNDLSTVTKLAHRLSDFKATC----YARALFFSIPKPDLFLFNVIIRGFSNNEM 87
            IHG  F+ D S+   +++ L D  + C     AR +F  +   D   +  ++ G+++N  
Sbjct: 252  IHGYVFRRDFSSA--VSNGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGC 309

Query: 88   PKSSICFYTHLR-KNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVG 146
                +  +  ++  N  +   +   +F+  AA+   D   G  +HG A+     SD+ V 
Sbjct: 310  FVEVLELFDKMKLGNVRINKVSAVSAFL--AAAETIDLEKGKEIHGCALQQRIDSDILVA 367

Query: 147  AALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGT 206
              L+ +Y K    + A+++F  +  +D V W+++I+ L++    ++++ +F +M +N   
Sbjct: 368  TPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEM-QNQKM 426

Query: 207  WLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAEL 266
              +  ++ ++LPA A++  L+LG  I C  +K      +   T LVS Y+KCG    A  
Sbjct: 427  KPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALT 486

Query: 267  LFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGH 326
             F  +   D+++ N++I+GY   G   +++ +F +L  SA   ++ T+VG++P       
Sbjct: 487  TFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACALLND 546

Query: 327  LHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESS-EKSLASWNAMIA 385
            L    CIH   +K G  S+  V  AL  +Y++   + +A  LF+++   K   +WN +IA
Sbjct: 547  LDQGTCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIA 606

Query: 386  GYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFES 445
             Y QNG  +EAIS F +M+     PN VT  S+L A A L A   G   H  +    F S
Sbjct: 607  AYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLS 666

Query: 446  NIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEML 505
            N  V  +LIDMYAKCG +  + +LF+ M HK  V+WN M+SGY +HGHG  A+ LFS M 
Sbjct: 667  NTLVGNSLIDMYAKCGQLDYSEKLFNEMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQ 726

Query: 506  HSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQL 565
             S ++   V+F+SVL AC HAGLV EG +IF SM   +  KP  EHYACMVD+LGRAG  
Sbjct: 727  ESQVQIDSVSFVSVLSACRHAGLVEEGRKIFHSMSDKYHIKPDLEHYACMVDLLGRAGLF 786

Query: 566  EKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIY 625
            ++ L FIK + VEP   VWGALLG+C +H +  L  VA + L +L+P N  + V+LS+IY
Sbjct: 787  DETLGFIKVMPVEPDAGVWGALLGSCRMHSNVKLGEVALDHLVKLEPRNPAHFVVLSSIY 846

Query: 626  SAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLN 685
            +    +  A   R  +    L K PGC+ +E+    H F  GD+ HPQ  +++ +   L 
Sbjct: 847  AQSGRWADAGKARSKMNDLGLKKTPGCSWVELKNKVHAFRVGDKSHPQLESMHLLWNTLL 906

Query: 686  GKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCL 745
             KM + G+  +    L +VEEE+KE+ +  HSE+LAI F L+ T PG+ I+I+KNLRVC 
Sbjct: 907  EKMEKIGYVPDRSCVLQNVEEEDKEMFLYSHSERLAITFALLNTPPGSTIQIVKNLRVCA 966

Query: 746  DCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
            DCHT TKFISK+T R I+VRDA RFHHF+ G+CSC DYW
Sbjct: 967  DCHTTTKFISKITTRRIIVRDATRFHHFEDGICSCNDYW 1005



 Score =  301 bits (772), Expect = 6e-79,   Method: Compositional matrix adjust.
 Identities = 196/605 (32%), Positives = 300/605 (49%), Gaps = 8/605 (1%)

Query: 15  LLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFL 74
           LL   K  + L Q HAQII+ GF++  S +T L +  S F     AR++F S P P   L
Sbjct: 38  LLSSCKHLNPLLQIHAQIIVSGFKHHHS-ITHLINLYSLFHKCDLARSVFDSTPNPSRIL 96

Query: 75  FNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHA 134
           +N +IR ++ ++    ++  Y +      L PD +T++FVL A +   +   GV  HG  
Sbjct: 97  WNSMIRAYTRSKQYNEALEMY-YCMVEKGLEPDKYTFTFVLKACTGALNLQEGVWFHGEI 155

Query: 135 IVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSI 194
              G   D+F+GA LVD+Y K   +K AR+VFDKMP++D V WN+MI+GL ++    +++
Sbjct: 156 DRRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCEAV 215

Query: 195 WVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSF 254
             F  M +  G    S S+  + P + ++  + L   I     +  F   V    GL+  
Sbjct: 216 DFFRSM-QLVGVEPSSVSLLNLFPGICKLSNIELCRSIHGYVFRRDFSSAVS--NGLIDL 272

Query: 255 YSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTI 314
           YSKCG+V+ A  +F  +V  D +S   M++GY  NG     L LF ++     R+N  + 
Sbjct: 273 YSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSA 332

Query: 315 VGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSE 374
           V           L     IH   L+  I S+  V T L  +Y++  E E A++LF     
Sbjct: 333 VSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQG 392

Query: 375 KSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWV 434
           + L +W+A+IA   Q G  EEA+SLFQEMQ  K+ PN VT+ SIL ACA L  + LGK +
Sbjct: 393 RDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSI 452

Query: 435 HELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHG 494
           H      + +S++   TAL+ MYAKCG    A   F+ MS +  VTWN++I+GY   G  
Sbjct: 453 HCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDP 512

Query: 495 LEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYAC 554
             A+ +F ++  S I P   T + V+ AC+    + +G  I   +I   GF+        
Sbjct: 513 YNAIDMFYKLRLSAINPDAGTMVGVVPACALLNDLDQGTCI-HGLIVKLGFESDCHVKNA 571

Query: 555 MVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMI--HKDTNLARVASEKLFELDP 612
           ++D+  + G L  A               W  ++ A M   H    ++     +L    P
Sbjct: 572 LIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHP 631

Query: 613 ENVGY 617
            +V +
Sbjct: 632 NSVTF 636


>gi|328774761|gb|AEB39780.1| pentatricopeptide repeat protein 45 [Funaria hygrometrica]
          Length = 1097

 Score =  520 bits (1339), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 284/762 (37%), Positives = 427/762 (56%), Gaps = 5/762 (0%)

Query: 25   LTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSN 84
            + + H+  +  G   DL     L H  +   +   AR +F  + + D+F + V+I G + 
Sbjct: 339  VKEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFDGMTERDIFSWTVMIGGLAQ 398

Query: 85   NEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIG--VLLHGHAIVSGYGSD 142
            +   + +   +  +++N  L P+  TY  +L+A++     ++    ++H HA  +G+ SD
Sbjct: 399  HGRGQEAFSLFLQMQRNGCL-PNLTTYLSILNASAIASTSALEWVKVVHKHAEEAGFISD 457

Query: 143  LFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVR 202
            L +G AL+ +Y K   +  AR VFD M ++D + WN+M+ GL +N C  ++  VF  M +
Sbjct: 458  LRIGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMMGGLAQNGCGHEAFTVFLQMQQ 517

Query: 203  NGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVE 262
             G    DST+  ++L        L    E+    ++ G      V +  +  Y +CG ++
Sbjct: 518  EGLV-PDSTTYLSLLNTHGSTDALEWVNEVHKHAVETGLISDFRVGSAFIHMYIRCGSID 576

Query: 263  RAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFY 322
             A LLF  +    + + NAMI G         +L LF Q+       +++T + ++    
Sbjct: 577  DARLLFDKLSVRHVTTWNAMIGGAAQQRCGREALSLFLQMQREGFIPDATTFINILSANV 636

Query: 323  PFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNA 382
                L     +HS    +G+V +  V  AL   YS+   ++ A+++FD+  E+++ +W  
Sbjct: 637  DEEALEWVKEVHSHATDAGLV-DLRVGNALVHTYSKCGNVKYAKQVFDDMVERNVTTWTM 695

Query: 383  MIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRN 442
            MI G  Q+G   +A S F +M    + P+  T  SILSACA  GA+   K VH    S  
Sbjct: 696  MIGGLAQHGCGHDAFSHFLQMLREGIVPDATTYVSILSACASTGALEWVKEVHNHAVSAG 755

Query: 443  FESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFS 502
              S++ V  AL+ MYAKCG+I +AR +FD M  +   +W  MI G   HG GLEAL  F 
Sbjct: 756  LVSDLRVGNALVHMYAKCGSIDDARSVFDDMVERDVFSWTVMIGGLAQHGRGLEALDFFV 815

Query: 503  EMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRA 562
            +M   G +P+G ++++VL ACSHAGLV EG   F SM  D+G +P  EHY CMVD+LGRA
Sbjct: 816  KMKSEGFKPNGYSYVAVLTACSHAGLVDEGRRQFLSMTQDYGIEPTMEHYTCMVDLLGRA 875

Query: 563  GQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLS 622
            G LE+A  FI  + +EP  A WGALLGAC+ + +  +A  A+++  +L P++   +VLLS
Sbjct: 876  GLLEEAELFILNMPIEPDDAPWGALLGACVTYGNLEMAEFAAKERLKLKPKSASTYVLLS 935

Query: 623  NIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLE 682
            NIY+A   + Q   VR +++++ + K PG + IEV    H F  GD  HP+S  IYA L 
Sbjct: 936  NIYAATGKWEQKLLVRSMMQRKGIRKEPGRSWIEVDNRIHSFVVGDTSHPESKEIYAQLN 995

Query: 683  KLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLR 742
             L  +++  G+  +T   L + ++E KE  +  HSEKLAI +GL+ T+    IR+ KNLR
Sbjct: 996  DLIERLKAKGYVPDTRLVLRNTDQEHKEQALCSHSEKLAIVYGLMHTQSKDPIRVYKNLR 1055

Query: 743  VCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
            VC DCHTATKFISK+TGR IV RDA RFHHFK GVCSCGDYW
Sbjct: 1056 VCSDCHTATKFISKITGREIVARDAKRFHHFKDGVCSCGDYW 1097



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 157/570 (27%), Positives = 262/570 (45%), Gaps = 7/570 (1%)

Query: 27  QTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNE 86
           Q H  II  G + +L    KL            AR +F  + K +++++  +I G++   
Sbjct: 139 QVHVCIIKSGMEQNLYVANKLLRVYIRCGRLQCARQVFDKLLKKNIYIWTTMIGGYAEYG 198

Query: 87  MPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVG 146
             + ++  Y  +R+     P+  TY  +L A     +   G  +H H I SG+ SD+ V 
Sbjct: 199 HAEDAMRVYDKMRQECG-QPNEITYLSILKACCCPVNLKWGKKIHAHIIQSGFQSDVRVE 257

Query: 147 AALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGT 206
            ALV++Y K   ++ A+ +FDKM E++ + W  MI GL      Q++  +F  M R G  
Sbjct: 258 TALVNMYVKCGSIEDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHLFLQMQREGFI 317

Query: 207 WLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAEL 266
             +S +  ++L A A    L    E+    +  G    + V   LV  Y+K G ++ A +
Sbjct: 318 -PNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARV 376

Query: 267 LFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLI--PVFYPF 324
           +F  +   D+ S   MI G   +G+ + +  LF Q+  +    N +T + ++        
Sbjct: 377 VFDGMTERDIFSWTVMIGGLAQHGRGQEAFSLFLQMQRNGCLPNLTTYLSILNASAIAST 436

Query: 325 GHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMI 384
             L     +H    ++G +S+  +  AL  +Y++   ++ AR +FD   ++ + SWNAM+
Sbjct: 437 SALEWVKVVHKHAEEAGFISDLRIGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMM 496

Query: 385 AGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFE 444
            G  QNG   EA ++F +MQ   + P+  T  S+L+      A+     VH+        
Sbjct: 497 GGLAQNGCGHEAFTVFLQMQQEGLVPDSTTYLSLLNTHGSTDALEWVNEVHKHAVETGLI 556

Query: 445 SNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEM 504
           S+  V +A I MY +CG+I +AR LFD +S +   TWN MI G      G EAL LF +M
Sbjct: 557 SDFRVGSAFIHMYIRCGSIDDARLLFDKLSVRHVTTWNAMIGGAAQQRCGREALSLFLQM 616

Query: 505 LHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQ 564
              G  P   TF+++L A      +    E+  S   D G   L    A +V    + G 
Sbjct: 617 QREGFIPDATTFINILSANVDEEALEWVKEV-HSHATDAGLVDLRVGNA-LVHTYSKCGN 674

Query: 565 LEKALEFIKGLAVEPGPAVWGALLGACMIH 594
           ++ A +    + VE     W  ++G    H
Sbjct: 675 VKYAKQVFDDM-VERNVTTWTMMIGGLAQH 703



 Score =  222 bits (566), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 137/425 (32%), Positives = 221/425 (52%), Gaps = 3/425 (0%)

Query: 98  LRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFS 157
           +R    +  D+F+Y  +L       D  +   +H   I SG   +L+V   L+ +Y +  
Sbjct: 108 IRVQQGIAIDSFSYVNILQRCLKQEDILLAKQVHVCIIKSGMEQNLYVANKLLRVYIRCG 167

Query: 158 WVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVL 217
            ++ AR+VFDK+ +K+  +W +MI G  +    +D++ V+  M +  G   +  +  ++L
Sbjct: 168 RLQCARQVFDKLLKKNIYIWTTMIGGYAEYGHAEDAMRVYDKMRQECGQ-PNEITYLSIL 226

Query: 218 PAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLI 277
            A      L+ G +I    ++ GF   V V T LV+ Y KCG +E A+L+F  +V  ++I
Sbjct: 227 KACCCPVNLKWGKKIHAHIIQSGFQSDVRVETALVNMYVKCGSIEDAQLIFDKMVERNVI 286

Query: 278 SCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFC 337
           S   MI G    G+ + +  LF Q+       NS T V ++      G L     +HS  
Sbjct: 287 SWTVMIGGLAHYGRGQEAFHLFLQMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHA 346

Query: 338 LKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAI 397
           + +G+  +  V  AL  +Y++   ++ AR +FD  +E+ + SW  MI G  Q+G  +EA 
Sbjct: 347 VNAGLALDLRVGNALVHMYAKSGSIDDARVVFDGMTERDIFSWTVMIGGLAQHGRGQEAF 406

Query: 398 SLFQEMQASKVAPNPVTVSSIL--SACAQLGAISLGKWVHELVKSRNFESNIYVSTALID 455
           SLF +MQ +   PN  T  SIL  SA A   A+   K VH+  +   F S++ +  ALI 
Sbjct: 407 SLFLQMQRNGCLPNLTTYLSILNASAIASTSALEWVKVVHKHAEEAGFISDLRIGNALIH 466

Query: 456 MYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVT 515
           MYAKCG+I +AR +FD M  +  ++WN M+ G   +G G EA  +F +M   G+ P   T
Sbjct: 467 MYAKCGSIDDARLVFDGMCDRDVISWNAMMGGLAQNGCGHEAFTVFLQMQQEGLVPDSTT 526

Query: 516 FLSVL 520
           +LS+L
Sbjct: 527 YLSLL 531



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 109/387 (28%), Positives = 187/387 (48%), Gaps = 2/387 (0%)

Query: 205 GTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERA 264
           G  +DS S   +L    + +++ L  ++    +K G   ++YV   L+  Y +CG ++ A
Sbjct: 113 GIAIDSFSYVNILQRCLKQEDILLAKQVHVCIIKSGMEQNLYVANKLLRVYIRCGRLQCA 172

Query: 265 ELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPF 324
             +F  +++ ++     MI GY   G  E ++R++ ++     + N  T + ++      
Sbjct: 173 RQVFDKLLKKNIYIWTTMIGGYAEYGHAEDAMRVYDKMRQECGQPNEITYLSILKACCCP 232

Query: 325 GHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMI 384
            +L     IH+  ++SG  S+  V TAL  +Y +   +E A+ +FD+  E+++ SW  MI
Sbjct: 233 VNLKWGKKIHAHIIQSGFQSDVRVETALVNMYVKCGSIEDAQLIFDKMVERNVISWTVMI 292

Query: 385 AGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFE 444
            G    G  +EA  LF +MQ     PN  T  SIL+A A  GA+   K VH    +    
Sbjct: 293 GGLAHYGRGQEAFHLFLQMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLA 352

Query: 445 SNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEM 504
            ++ V  AL+ MYAK G+I +AR +FD M+ +   +W  MI G   HG G EA  LF +M
Sbjct: 353 LDLRVGNALVHMYAKSGSIDDARVVFDGMTERDIFSWTVMIGGLAQHGRGQEAFSLFLQM 412

Query: 505 LHSGIRPSGVTFLSVLYACSHAGL-VREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAG 563
             +G  P+  T+LS+L A + A     E  ++      + GF         ++ +  + G
Sbjct: 413 QRNGCLPNLTTYLSILNASAIASTSALEWVKVVHKHAEEAGFISDLRIGNALIHMYAKCG 472

Query: 564 QLEKALEFIKGLAVEPGPAVWGALLGA 590
            ++ A     G+  +     W A++G 
Sbjct: 473 SIDDARLVFDGMC-DRDVISWNAMMGG 498



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 81/266 (30%), Positives = 136/266 (51%), Gaps = 2/266 (0%)

Query: 329 LTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYT 388
           L   +H   +KSG+  N  V   L  VY R   ++ AR++FD+  +K++  W  MI GY 
Sbjct: 136 LAKQVHVCIIKSGMEQNLYVANKLLRVYIRCGRLQCARQVFDKLLKKNIYIWTTMIGGYA 195

Query: 389 QNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIY 448
           + G  E+A+ ++ +M+     PN +T  SIL AC     +  GK +H  +    F+S++ 
Sbjct: 196 EYGHAEDAMRVYDKMRQECGQPNEITYLSILKACCCPVNLKWGKKIHAHIIQSGFQSDVR 255

Query: 449 VSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSG 508
           V TAL++MY KCG+I +A+ +FD M  ++ ++W  MI G   +G G EA  LF +M   G
Sbjct: 256 VETALVNMYVKCGSIEDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHLFLQMQREG 315

Query: 509 IRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKA 568
             P+  T++S+L A + AG +    E+    + + G          +V +  ++G ++ A
Sbjct: 316 FIPNSYTYVSILNANASAGALEWVKEVHSHAV-NAGLALDLRVGNALVHMYAKSGSIDDA 374

Query: 569 LEFIKGLAVEPGPAVWGALLGACMIH 594
                G+  E     W  ++G    H
Sbjct: 375 RVVFDGM-TERDIFSWTVMIGGLAQH 399


>gi|297740136|emb|CBI30318.3| unnamed protein product [Vitis vinifera]
          Length = 861

 Score =  520 bits (1338), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 299/805 (37%), Positives = 438/805 (54%), Gaps = 55/805 (6%)

Query: 10  NLFLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPK 69
             ++S L   +  +Q+ Q HAQ  +HG   ++    KL +  S ++A   A  LF  +  
Sbjct: 82  KFYISALVNCRNLTQVRQVHAQASVHGMLENIVVANKLIYFYSYYRALDDAYGLFDGMCV 141

Query: 70  PDLFLFNVIIRGFSNNEMPKSSICFYTHLRK--NTALTPDNFTYSFVLSAASACCDRSIG 127
            D   ++V++ GF+  ++     CF T  R+       PDN+T  FV+ A      R + 
Sbjct: 142 RDSVSWSVMVGGFA--KVGDYINCFGT-FRELIRCGARPDNYTLPFVIRAC-----RDLK 193

Query: 128 VLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKN 187
            L                  ALVD+Y K   ++ AR +FDKM E+D V W  MI G  + 
Sbjct: 194 NL----------------QMALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAEC 237

Query: 188 CCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYV 247
               +S+ +F  M R  G   D  ++  V+ A A++  +     I     +  F   V +
Sbjct: 238 GKANESLVLFEKM-REEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVIL 296

Query: 248 LTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAE 307
            T ++  Y+KCG VE A  +F  +   ++IS +AMI+ Y  +G+   +L LFR +L+S  
Sbjct: 297 GTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGM 356

Query: 308 RVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARK 367
             +  T+  L+       +L     +H+     G++ N  V   L   YS    ++ A  
Sbjct: 357 LPDKITLASLLYACINCRNLTQVRQVHAQASVHGMLQNLIVANKLVHFYSYYRALDDAYG 416

Query: 368 LFDESSEKSLASWNAMIAGYTQ----------------------------NGLTEEAISL 399
           LFD    +   SW+ M+ G+ +                             G   E++ L
Sbjct: 417 LFDGMCVRDSVSWSVMVGGFAKVGDYMNCFGTFRELIRCGARPDNYTLPFCGNANESLVL 476

Query: 400 FQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAK 459
           F +M+   V P+ V + +++ ACA+LGA+   + + + ++ + F+ ++ + TA+IDM+AK
Sbjct: 477 FDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAK 536

Query: 460 CGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSV 519
           CG +  ARE+FD M  K+ ++W+ MI+ YG HG G +AL LF  ML SGI P+ +T +S+
Sbjct: 537 CGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSL 596

Query: 520 LYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEP 579
           LYACSHAGLV EG   F  M  D+  +   +HY C+VD+LGRAG+L++AL+ I+ + VE 
Sbjct: 597 LYACSHAGLVEEGLRFFSLMWEDYSVRADVKHYTCVVDLLGRAGRLDEALKLIESMTVEK 656

Query: 580 GPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQ 639
              +WGA LGAC  HKD  LA  A+  L EL P+N G+++LLSNIY+    +   A  R 
Sbjct: 657 DEGLWGAFLGACRTHKDVVLAEKAATSLLELQPQNPGHYILLSNIYANAGRWEDVAKTRD 716

Query: 640 VVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVT 699
           ++ +R+L K PG T IEV    H F+ GD  HP+S  IY ML+ L  K+   G+  +T  
Sbjct: 717 LMSQRRLKKIPGWTWIEVDNKSHQFSVGDTTHPRSKEIYEMLKSLGNKLELVGYVPDTNF 776

Query: 700 ALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTG 759
            LHDV+EE K  ++  HSEKLAIAFGLIAT   T IRIIKNLRVC DCHT  K +S +TG
Sbjct: 777 VLHDVDEELKIGILYSHSEKLAIAFGLIATPEHTPIRIIKNLRVCGDCHTFCKLVSAITG 836

Query: 760 RVIVVRDANRFHHFKGGVCSCGDYW 784
           RVI+VRDANRFHHFK G CSCGDYW
Sbjct: 837 RVIIVRDANRFHHFKEGACSCGDYW 861


>gi|297804280|ref|XP_002870024.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297315860|gb|EFH46283.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 871

 Score =  519 bits (1337), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 285/785 (36%), Positives = 446/785 (56%), Gaps = 13/785 (1%)

Query: 6   PQSRNLFLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFF 65
           P++    L L   +K+     +    I  +GF  D +  +KLA   ++      A  +F 
Sbjct: 94  PRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVLDSNLGSKLALMYTNCGDLKEASRVFD 153

Query: 66  SIPKPDLFLFNVIIRGFSNNEMPKS-----SICFYTHLRKNTALTPDNFTYSFVLSAASA 120
            +       +N+++     NE+ KS     SI  +  +  ++ +  D++T+S V  + S+
Sbjct: 154 QVKIEKALFWNILM-----NELAKSGDFSGSIGLFKKM-MSSGVEMDSYTFSCVSKSFSS 207

Query: 121 CCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSM 180
               + G  LHG+ + SG+G    VG +LV  Y K   V SARKVFD+M E+D + WNS+
Sbjct: 208 LRSVNGGEQLHGYILKSGFGERNSVGNSLVAFYLKNHRVDSARKVFDEMTERDVISWNSI 267

Query: 181 ISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLG 240
           I+G + N   +  + VF  M+ +G   +D  ++ +V    A+ + + LG  + C G+K  
Sbjct: 268 INGYVSNGLAEKGLSVFVQMLFSG-IEIDLATIVSVFAGCADSRLISLGRAVHCFGVKAC 326

Query: 241 FHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFR 300
           F         L+  YSKCG+++ A+++FR++    ++S  +MI+GY   G    +++LF 
Sbjct: 327 FSREDRFCNTLLDMYSKCGDLDSAKVVFREMSGRSVVSYTSMIAGYAREGLAGEAVKLFE 386

Query: 301 QLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLN 360
           ++       +  T+  ++        L     +H +  ++ +  +  V  AL  +Y++  
Sbjct: 387 EMEEEGISPDVYTVTAVLNCCARNRLLDEGKRVHEWIKENDMGFDIFVSNALMDMYAKCG 446

Query: 361 EMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASK-VAPNPVTVSSIL 419
            M  A  +F E   K + SWN +I GY++N    EA+SLF  +   K  +P+  TV+ +L
Sbjct: 447 SMREAELVFSEMRVKDIISWNTVIGGYSKNCYANEALSLFNLLLVEKRFSPDERTVACVL 506

Query: 420 SACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEV 479
            ACA L A   G+ +H  +    + S+ +V+ +L+DMYAKCG ++ AR LFD ++ K  V
Sbjct: 507 PACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLARLLFDDITSKDLV 566

Query: 480 TWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSM 539
           +W  MI+GYG+HG G EA+ LF++M  +GI P  ++F+S+LYACSH+GLV EG   F  M
Sbjct: 567 SWTVMIAGYGMHGFGKEAIALFNQMRQAGIEPDEISFVSLLYACSHSGLVDEGWRFFNIM 626

Query: 540 IHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNL 599
            H+   +P  EHYAC+VD+L R G L KA  FI+ + + P   +WGALL  C IH D  L
Sbjct: 627 RHECKIEPTVEHYACIVDMLARTGNLSKAYRFIENMPIPPDATIWGALLCGCRIHHDVKL 686

Query: 600 ARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGG 659
           A   +EK+FEL+PEN GY+VL++NIY+    + +   +R+ + +R L K PGC+ IE+ G
Sbjct: 687 AERVAEKVFELEPENTGYYVLMANIYAEAEKWEEVKRLRKRIGQRGLRKNPGCSWIEIKG 746

Query: 660 TPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEK 719
             ++F +GD  +P++  I A L  +  +M E G+   T  AL D EE EKE  +  HSEK
Sbjct: 747 RVNIFVAGDSSNPETEKIEAFLRGVRARMIEEGYSPLTKYALIDAEEMEKEEALCGHSEK 806

Query: 720 LAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCS 779
           LA+A G+I++  G  IR+ KNLRVC DCH   KF+SK+T R IV+RD+NRFH FK G CS
Sbjct: 807 LAMALGIISSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLRDSNRFHQFKDGHCS 866

Query: 780 CGDYW 784
           C  +W
Sbjct: 867 CRGFW 871



 Score = 62.8 bits (151), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 39/162 (24%), Positives = 77/162 (47%), Gaps = 2/162 (1%)

Query: 374 EKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKW 433
           ++S+   N  +  + ++G  + A+ L     + K   +P T+ S+L  CA   ++  GK 
Sbjct: 58  DRSVTDANTQLRRFCESGNLKNAVKLLH--VSGKWDIDPRTLCSVLQLCADSKSLKDGKE 115

Query: 434 VHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGH 493
           V   ++   F  +  + + L  MY  CG++ EA  +FD +  +  + WN +++     G 
Sbjct: 116 VDNFIRGNGFVLDSNLGSKLALMYTNCGDLKEASRVFDQVKIEKALFWNILMNELAKSGD 175

Query: 494 GLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEI 535
              ++ LF +M+ SG+     TF  V  + S    V  G+++
Sbjct: 176 FSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVNGGEQL 217


>gi|224140549|ref|XP_002323645.1| predicted protein [Populus trichocarpa]
 gi|222868275|gb|EEF05406.1| predicted protein [Populus trichocarpa]
          Length = 682

 Score =  519 bits (1337), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 276/655 (42%), Positives = 383/655 (58%), Gaps = 1/655 (0%)

Query: 130 LHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCC 189
           +H   +  G   D ++   ++   F F     + ++ D+  E +  L+N+MI GL+ N C
Sbjct: 29  IHAALLRLGLDEDTYLLNKVLRFSFNFGNTNYSFRILDQTKEPNIFLFNTMIRGLVLNDC 88

Query: 190 FQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLT 249
           FQ+SI ++  M R  G   DS +   VL A A V +  LG+++  L +K G     +V  
Sbjct: 89  FQESIEIYHSM-RKEGLSPDSFTFPFVLKACARVLDSELGVKMHSLVVKAGCEADAFVKI 147

Query: 250 GLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERV 309
            L++ Y+KCG ++ A  +F DI   +  S  A ISGY   GK   ++ +FR+LL    R 
Sbjct: 148 SLINLYTKCGFIDNAFKVFDDIPDKNFASWTATISGYVGVGKCREAIDMFRRLLEMGLRP 207

Query: 310 NSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLF 369
           +S ++V ++      G L     I  +  ++G+V N  V TAL   Y +   ME AR +F
Sbjct: 208 DSFSLVEVLSACKRTGDLRSGEWIDEYITENGMVRNVFVATALVDFYGKCGNMERARSVF 267

Query: 370 DESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAIS 429
           D   EK++ SW++MI GY  NGL +EA+ LF +M    + P+   +  +L +CA+LGA+ 
Sbjct: 268 DGMLEKNIVSWSSMIQGYASNGLPKEALDLFFKMLNEGLKPDCYAMVGVLCSCARLGALE 327

Query: 430 LGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYG 489
           LG W   L+    F  N  + TALIDMYAKCG +  A E+F  M  K  V WN  ISG  
Sbjct: 328 LGDWASNLINGNEFLDNSVLGTALIDMYAKCGRMDRAWEVFRGMRKKDRVVWNAAISGLA 387

Query: 490 LHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLA 549
           + GH  +AL LF +M  SGI+P   TF+ +L AC+HAGLV EG   F SM       P  
Sbjct: 388 MSGHVKDALGLFGQMEKSGIKPDRNTFVGLLCACTHAGLVEEGRRYFNSMECVFTLTPEI 447

Query: 550 EHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFE 609
           EHY CMVD+LGRAG L++A + IK + +E    VWGALLG C +H+DT L  V  +KL  
Sbjct: 448 EHYGCMVDLLGRAGCLDEAHQLIKSMPMEANAIVWGALLGGCRLHRDTQLVEVVLKKLIA 507

Query: 610 LDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQ 669
           L+P + G +VLLSNIY+A   + +AA +R ++ +R + K PG + IEV G  H F  GD 
Sbjct: 508 LEPWHSGNYVLLSNIYAASHKWEEAAKIRSIMSERGVKKIPGYSWIEVDGVVHQFLVGDT 567

Query: 670 LHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIAT 729
            HP S  IYA L +L   ++ AG+   T   L D+EEEEKE  +  HSEKLA+AFGLI+T
Sbjct: 568 SHPLSEKIYAKLGELAKDLKAAGYVPTTDHVLFDIEEEEKEHFIGCHSEKLAVAFGLIST 627

Query: 730 EPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
            P  +I ++KNLRVC DCH A K IS++ GR I+VRD NRFH F  G+CSC DYW
Sbjct: 628 APNDKILVVKNLRVCGDCHEAIKHISRIAGREIIVRDNNRFHCFTDGLCSCKDYW 682



 Score =  223 bits (568), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 158/563 (28%), Positives = 276/563 (49%), Gaps = 16/563 (2%)

Query: 2   SMKTPQSRNLFLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYAR 61
           S+   +S  +   L++G      L   HA ++  G   D   + K+     +F  T Y+ 
Sbjct: 3   SLIVTKSAGIKNRLIQGFSCLKHLKHIHAALLRLGLDEDTYLLNKVLRFSFNFGNTNYSF 62

Query: 62  ALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASAC 121
            +     +P++FLFN +IRG   N+  + SI  Y  +RK   L+PD+FT+ FVL A +  
Sbjct: 63  RILDQTKEPNIFLFNTMIRGLVLNDCFQESIEIYHSMRKE-GLSPDSFTFPFVLKACARV 121

Query: 122 CDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMI 181
            D  +GV +H   + +G  +D FV  +L++LY K  ++ +A KVFD +P+K+   W + I
Sbjct: 122 LDSELGVKMHSLVVKAGCEADAFVKISLINLYTKCGFIDNAFKVFDDIPDKNFASWTATI 181

Query: 182 SGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGF 241
           SG +     +++I +F  ++   G   DS S+  VL A     +LR G  I     + G 
Sbjct: 182 SGYVGVGKCREAIDMFRRLLEM-GLRPDSFSLVEVLSACKRTGDLRSGEWIDEYITENGM 240

Query: 242 HDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQ 301
             +V+V T LV FY KCG +ERA  +F  ++  +++S ++MI GY  NG  + +L LF +
Sbjct: 241 VRNVFVATALVDFYGKCGNMERARSVFDGMLEKNIVSWSSMIQGYASNGLPKEALDLFFK 300

Query: 302 LLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNE 361
           +L    + +   +VG++      G L L +   +    +  + NS + TAL  +Y++   
Sbjct: 301 MLNEGLKPDCYAMVGVLCSCARLGALELGDWASNLINGNEFLDNSVLGTALIDMYAKCGR 360

Query: 362 MEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSA 421
           M+ A ++F    +K    WNA I+G   +G  ++A+ LF +M+ S + P+  T   +L A
Sbjct: 361 MDRAWEVFRGMRKKDRVVWNAAISGLAMSGHVKDALGLFGQMEKSGIKPDRNTFVGLLCA 420

Query: 422 CAQLGAISLG-KWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSE-V 479
           C   G +  G ++ + +         I     ++D+  + G + EA +L   M  ++  +
Sbjct: 421 CTHAGLVEEGRRYFNSMECVFTLTPEIEHYGCMVDLLGRAGCLDEAHQLIKSMPMEANAI 480

Query: 480 TWNTMISGYGLHGHGLEALQLFSEML-----HSGIRPSGVTFLSVLYACSHAGLVREGDE 534
            W  ++ G  LH        +  +++     HSG        LS +YA SH     E  +
Sbjct: 481 VWGALLGGCRLHRDTQLVEVVLKKLIALEPWHSG----NYVLLSNIYAASHKW--EEAAK 534

Query: 535 IFQSMIHDHGFKPLAEHYACMVD 557
           I +S++ + G K +  +    VD
Sbjct: 535 I-RSIMSERGVKKIPGYSWIEVD 556


>gi|147843467|emb|CAN82070.1| hypothetical protein VITISV_010010 [Vitis vinifera]
          Length = 1005

 Score =  518 bits (1335), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 284/759 (37%), Positives = 431/759 (56%), Gaps = 13/759 (1%)

Query: 34   IHG--FQNDLSTVTKLAHRLSDFKATC----YARALFFSIPKPDLFLFNVIIRGFSNNEM 87
            IHG  F+ D S+   +++ L D  + C     AR +F  +   D   +  ++ G+++N  
Sbjct: 252  IHGYVFRRDFSSA--VSNGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGC 309

Query: 88   PKSSICFYTHLR-KNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVG 146
                +  +  ++  N  +   +   +F+  AA+   D   G  +HG A+     SD+ V 
Sbjct: 310  FVEVLELFDKMKLGNVRINKVSAVSAFL--AAAETIDLEKGKEIHGCALQQRIDSDILVA 367

Query: 147  AALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGT 206
              L+ +Y K    + A+++F  +  +D V W+++I+ L++    ++++ +F +M +N   
Sbjct: 368  TPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEM-QNQKM 426

Query: 207  WLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAEL 266
              +  ++ ++LPA A++  L+LG  I C  +K      +   T LVS Y+KCG    A  
Sbjct: 427  KPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALT 486

Query: 267  LFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGH 326
             F  +   D+++ N++I+GY   G   +++ +F +L  SA   ++ T+VG++P       
Sbjct: 487  TFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACALLND 546

Query: 327  LHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESS-EKSLASWNAMIA 385
            L    CIH   +K G  S+  V  AL  +Y++   + +A  LF+++   K   +WN +IA
Sbjct: 547  LDQGTCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIA 606

Query: 386  GYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFES 445
             Y QNG  +EAIS F +M+     PN VT  S+L A A L A   G   H  +    F S
Sbjct: 607  AYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLS 666

Query: 446  NIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEML 505
            N  V  +LIDMYAKCG +  + +LF+ M HK  V+WN M+SGY +HGHG  A+ LFS M 
Sbjct: 667  NTLVGNSLIDMYAKCGQLXYSEKLFNEMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQ 726

Query: 506  HSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQL 565
             S ++   V+F+SVL AC H GLV EG +IF SM   +  KP  EHYACMVD+LGRAG  
Sbjct: 727  ESQVQIDSVSFVSVLSACRHXGLVEEGRKIFHSMSDKYHIKPDLEHYACMVDLLGRAGLF 786

Query: 566  EKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIY 625
            ++ L FIK + VEP   VWGALLG+C +H +  L  VA + L +L+P N  + V+LS+IY
Sbjct: 787  DETLGFIKVMPVEPDAGVWGALLGSCRMHSNVKLGEVALDHLVKLEPRNPAHFVVLSSIY 846

Query: 626  SAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLN 685
            +    +  A   R  +    L K PGC+ +E+    H F  GD+ HPQ  +++ +   L 
Sbjct: 847  AQSGRWADAGKARSKMNDLGLKKTPGCSWVELKNKVHAFRVGDKSHPQLESMHLLWNTLL 906

Query: 686  GKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCL 745
             KM + G+  +    L +VEEE+KE+ +  HSE+LAI F L+ T PG+ I+I+KNLRVC 
Sbjct: 907  EKMEKIGYVPDRSCVLQNVEEEDKEMFLYSHSERLAITFALLNTPPGSTIQIVKNLRVCA 966

Query: 746  DCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
            DCHT TKFISK+T R I+VRDA RFHHF+ G+CSC DYW
Sbjct: 967  DCHTTTKFISKITTRRIIVRDATRFHHFEDGICSCNDYW 1005



 Score =  301 bits (771), Expect = 9e-79,   Method: Compositional matrix adjust.
 Identities = 196/605 (32%), Positives = 300/605 (49%), Gaps = 8/605 (1%)

Query: 15  LLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFL 74
           LL   K  + L Q HAQII+ GF++  S +T L +  S F     AR++F S P P   L
Sbjct: 38  LLSSCKHLNPLLQIHAQIIVSGFKHHHS-ITHLINLYSLFHKCDLARSVFDSTPNPSRIL 96

Query: 75  FNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHA 134
           +N +IR ++ ++    ++  Y +      L PD +T++FVL A +   +   GV  HG  
Sbjct: 97  WNSMIRAYTRSKQYNEALEMY-YCMVEKGLEPDKYTFTFVLKACTGALNLQEGVWFHGEI 155

Query: 135 IVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSI 194
              G   D+F+GA LVD+Y K   +K AR+VFDKMP++D V WN+MI+GL ++    +++
Sbjct: 156 DRRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCEAV 215

Query: 195 WVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSF 254
             F  M +  G    S S+  + P + ++  + L   I     +  F   V    GL+  
Sbjct: 216 DFFRSM-QLVGVEPSSVSLLNLFPGICKLSNIELCRSIHGYVFRRDFSSAVS--NGLIDL 272

Query: 255 YSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTI 314
           YSKCG+V+ A  +F  +V  D +S   M++GY  NG     L LF ++     R+N  + 
Sbjct: 273 YSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSA 332

Query: 315 VGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSE 374
           V           L     IH   L+  I S+  V T L  +Y++  E E A++LF     
Sbjct: 333 VSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQG 392

Query: 375 KSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWV 434
           + L +W+A+IA   Q G  EEA+SLFQEMQ  K+ PN VT+ SIL ACA L  + LGK +
Sbjct: 393 RDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSI 452

Query: 435 HELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHG 494
           H      + +S++   TAL+ MYAKCG    A   F+ MS +  VTWN++I+GY   G  
Sbjct: 453 HCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDP 512

Query: 495 LEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYAC 554
             A+ +F ++  S I P   T + V+ AC+    + +G  I   +I   GF+        
Sbjct: 513 YNAIDMFYKLRLSAINPDAGTMVGVVPACALLNDLDQGTCI-HGLIVKLGFESDCHVKNA 571

Query: 555 MVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMI--HKDTNLARVASEKLFELDP 612
           ++D+  + G L  A               W  ++ A M   H    ++     +L    P
Sbjct: 572 LIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHP 631

Query: 613 ENVGY 617
            +V +
Sbjct: 632 NSVTF 636


>gi|62320270|dbj|BAD94552.1| hypothetical protein [Arabidopsis thaliana]
          Length = 694

 Score =  518 bits (1335), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 263/689 (38%), Positives = 408/689 (59%), Gaps = 8/689 (1%)

Query: 98  LRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFS 157
           L  N+ +  D+F  S + SA      + I    H   +V G     F+   L+     F 
Sbjct: 12  LYTNSGIHSDSFYASLIDSATHKAQLKQI----HARLLVLGLQFSGFLITKLIHASSSFG 67

Query: 158 WVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVL 217
            +  AR+VFD +P      WN++I G  +N  FQD++ ++ +M +      DS +   +L
Sbjct: 68  DITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNM-QLARVSPDSFTFPHLL 126

Query: 218 PAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPD-- 275
            A + +  L++G  +     +LGF   V+V  GL++ Y+KC  +  A  +F  +  P+  
Sbjct: 127 KACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERT 186

Query: 276 LISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHS 335
           ++S  A++S Y  NG+   +L +F  +     + +   +V ++  F     L     IH+
Sbjct: 187 IVSWTAIVSAYAQNGEPMEALEIFSHMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHA 246

Query: 336 FCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEE 395
             +K G+     +L +L+T+Y++  ++  A+ LFD+    +L  WNAMI+GY +NG   E
Sbjct: 247 SVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYARE 306

Query: 396 AISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALID 455
           AI +F EM    V P+ ++++S +SACAQ+G++   + ++E V   ++  ++++S+ALID
Sbjct: 307 AIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALID 366

Query: 456 MYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVT 515
           M+AKCG++  AR +FD    +  V W+ MI GYGLHG   EA+ L+  M   G+ P+ VT
Sbjct: 367 MFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVT 426

Query: 516 FLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGL 575
           FL +L AC+H+G+VREG   F +++ DH   P  +HYAC++D+LGRAG L++A E IK +
Sbjct: 427 FLGLLMACNHSGMVREGWWFF-NLMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCM 485

Query: 576 AVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAA 635
            V+PG  VWGALL AC  H+   L   A+++LF +DP N G++V LSN+Y+A R + + A
Sbjct: 486 PVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVA 545

Query: 636 TVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQT 695
            VR  +K++ L K  GC+ +EV G    F  GD+ HP+   I   +E +  +++E GF  
Sbjct: 546 EVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKEGGFVA 605

Query: 696 ETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFIS 755
               +LHD+ +EE E  +  HSE++AIA+GLI+T  GT +RI KNLR C++CH ATK IS
Sbjct: 606 NKDASLHDLNDEEAEETLCSHSERIAIAYGLISTPQGTPLRITKNLRACVNCHAATKLIS 665

Query: 756 KVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           K+  R IVVRD NRFHHFK GVCSCGDYW
Sbjct: 666 KLVDREIVVRDTNRFHHFKDGVCSCGDYW 694



 Score =  249 bits (637), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 158/528 (29%), Positives = 266/528 (50%), Gaps = 18/528 (3%)

Query: 7   QSRNLFLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFS 66
            S + + SL+  A  ++QL Q HA++++ G Q     +TKL H  S F    +AR +F  
Sbjct: 19  HSDSFYASLIDSATHKAQLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDD 78

Query: 67  IPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSI 126
           +P+P +F +N IIRG+S N   + ++  Y++++    ++PD+FT+  +L A S      +
Sbjct: 79  LPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQL-ARVSPDSFTFPHLLKACSGLSHLQM 137

Query: 127 GVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFD--KMPEKDTVLWNSMISGL 184
           G  +H      G+ +D+FV   L+ LY K   + SAR VF+   +PE+  V W +++S  
Sbjct: 138 GRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAY 197

Query: 185 MKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDH 244
            +N    +++ +F  M R      D  ++ +VL A   +Q+L+ G  I    +K+G    
Sbjct: 198 AQNGEPMEALEIFSHM-RKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIE 256

Query: 245 VYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLA 304
             +L  L + Y+KCG+V  A++LF  +  P+LI  NAMISGY  NG    ++ +F +++ 
Sbjct: 257 PDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMIN 316

Query: 305 SAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEA 364
              R ++ +I   I      G L     ++ +  +S    +  + +AL  ++++   +E 
Sbjct: 317 KDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEG 376

Query: 365 ARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQ 424
           AR +FD + ++ +  W+AMI GY  +G   EAISL++ M+   V PN VT   +L AC  
Sbjct: 377 ARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNH 436

Query: 425 LGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVT-WNT 483
            G +  G W   L+              +ID+  + G++ +A E+   M  +  VT W  
Sbjct: 437 SGMVREGWWFFNLMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGA 496

Query: 484 MISGYGLHGH----GLEALQLFSEMLHSGIRPSGVTF---LSVLYACS 524
           ++S    H H       A QLFS      I PS       LS LYA +
Sbjct: 497 LLSACKKHRHVELGEYAAQQLFS------IDPSNTGHYVQLSNLYAAA 538


>gi|224125684|ref|XP_002319650.1| predicted protein [Populus trichocarpa]
 gi|222858026|gb|EEE95573.1| predicted protein [Populus trichocarpa]
          Length = 705

 Score =  518 bits (1334), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 256/599 (42%), Positives = 371/599 (61%), Gaps = 22/599 (3%)

Query: 208 LDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELL 267
           +DS  + +VL A +++   R+G EI    +K G    V+V+  L+  YS+CG +  A LL
Sbjct: 107 VDSFIIPSVLKACSQISVARMGKEIHGFSVKNGLVSDVFVVNALMQMYSECGSLVSARLL 166

Query: 268 F-----RDIV-----------------RPDLISCNAMISGYTCNGKTESSLRLFRQLLAS 305
           F     RD+V                 +  ++S  AMI+GY      E   RLF +++  
Sbjct: 167 FDKMSERDVVSWSTMIRAYITLFYGFSQRSIVSWTAMIAGYIRCNDLEEGERLFVRMIEE 226

Query: 306 AERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAA 365
               N  T++ LI      G + L   +H++ L++G   + ++ TAL  +Y +  E+ +A
Sbjct: 227 NVFPNDITMLSLIISCGFVGAVQLGKRLHAYILRNGFGMSLALATALVDMYGKCGEIRSA 286

Query: 366 RKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQL 425
           R +FD    K + +W AMI+ Y Q    + A  LF +M+ + V PN +T+ S+LS CA  
Sbjct: 287 RAIFDSMKNKDVMTWTAMISAYAQANCIDYAFQLFVQMRDNGVRPNELTMVSLLSLCAVN 346

Query: 426 GAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMI 485
           GA+ +GKW H  +  +  E ++ + TALIDMYAKCG+I  A+ LF     +   TWN M+
Sbjct: 347 GALDMGKWFHAYIDKQGVEVDVILKTALIDMYAKCGDISGAQRLFSEAIDRDICTWNVMM 406

Query: 486 SGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGF 545
           +GYG+HG+G +AL+LF+EM   G++P+ +TF+  L+ACSHAGLV EG  +F+ MIHD G 
Sbjct: 407 AGYGMHGYGEKALKLFTEMETLGVKPNDITFIGALHACSHAGLVVEGKGLFEKMIHDFGL 466

Query: 546 KPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASE 605
            P  EHY CMVD+LGRAG L++A + I+ + V P  A+WGA+L AC IHK++N+  +A+ 
Sbjct: 467 VPKVEHYGCMVDLLGRAGLLDEAYKMIESMPVTPNIAIWGAMLAACKIHKNSNMGELAAR 526

Query: 606 KLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFT 665
           +L  L+P+N GY VL+SNIY+A   +   A +R+ VK   + K PG + IEV G  H F 
Sbjct: 527 ELLALEPQNCGYKVLMSNIYAAANRWNDVAGMRKAVKDTGIKKEPGMSSIEVNGLVHDFK 586

Query: 666 SGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFG 725
            GD  HP    I  ML +++ K++EAG+  +T   LH+++EEEKE  +  HSEKLA+AFG
Sbjct: 587 MGDTAHPLIEKISEMLAEMSKKLKEAGYLPDTSVVLHNIDEEEKETALNYHSEKLAMAFG 646

Query: 726 LIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           LI+T PGT IR++KNLR+C DCHT TK +SK+  RVI+VRD NRFHHF+ G CSCG YW
Sbjct: 647 LISTAPGTPIRVVKNLRICDDCHTVTKLLSKIYKRVIIVRDRNRFHHFREGSCSCGGYW 705



 Score =  172 bits (437), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 113/428 (26%), Positives = 211/428 (49%), Gaps = 26/428 (6%)

Query: 88  PKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGA 147
           P+ ++  YT++RK   +  D+F    VL A S      +G  +HG ++ +G  SD+FV  
Sbjct: 90  PRYALNTYTYMRK-LDIEVDSFIIPSVLKACSQISVARMGKEIHGFSVKNGLVSDVFVVN 148

Query: 148 ALVDLYFKFSWVKSARKVFDKMPEKDTVLWNS----------------------MISGLM 185
           AL+ +Y +   + SAR +FDKM E+D V W++                      MI+G +
Sbjct: 149 ALMQMYSECGSLVSARLLFDKMSERDVVSWSTMIRAYITLFYGFSQRSIVSWTAMIAGYI 208

Query: 186 KNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHV 245
           +    ++   +F  M+     + +  ++ +++ +   V  ++LG  +    L+ GF   +
Sbjct: 209 RCNDLEEGERLFVRMIEE-NVFPNDITMLSLIISCGFVGAVQLGKRLHAYILRNGFGMSL 267

Query: 246 YVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLAS 305
            + T LV  Y KCGE+  A  +F  +   D+++  AMIS Y      + + +LF Q+  +
Sbjct: 268 ALATALVDMYGKCGEIRSARAIFDSMKNKDVMTWTAMISAYAQANCIDYAFQLFVQMRDN 327

Query: 306 AERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAA 365
             R N  T+V L+ +    G L +    H++  K G+  +  + TAL  +Y++  ++  A
Sbjct: 328 GVRPNELTMVSLLSLCAVNGALDMGKWFHAYIDKQGVEVDVILKTALIDMYAKCGDISGA 387

Query: 366 RKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQL 425
           ++LF E+ ++ + +WN M+AGY  +G  E+A+ LF EM+   V PN +T    L AC+  
Sbjct: 388 QRLFSEAIDRDICTWNVMMAGYGMHGYGEKALKLFTEMETLGVKPNDITFIGALHACSHA 447

Query: 426 GAISLGKWVHE-LVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVT-WNT 483
           G +  GK + E ++        +     ++D+  + G + EA ++ + M     +  W  
Sbjct: 448 GLVVEGKGLFEKMIHDFGLVPKVEHYGCMVDLLGRAGLLDEAYKMIESMPVTPNIAIWGA 507

Query: 484 MISGYGLH 491
           M++   +H
Sbjct: 508 MLAACKIH 515



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 99/405 (24%), Positives = 174/405 (42%), Gaps = 48/405 (11%)

Query: 20  KTQSQLTQTHAQIIIHGFQ------NDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLF 73
           K  SQ++       IHGF       +D+  V  L    S+  +   AR LF  + + D+ 
Sbjct: 117 KACSQISVARMGKEIHGFSVKNGLVSDVFVVNALMQMYSECGSLVSARLLFDKMSERDVV 176

Query: 74  LFNVIIR-------GFSN----------------NEMPKSSICFYTHLRKNTALTPDNFT 110
            ++ +IR       GFS                 N++ +    F   + +N  + P++ T
Sbjct: 177 SWSTMIRAYITLFYGFSQRSIVSWTAMIAGYIRCNDLEEGERLFVRMIEEN--VFPNDIT 234

Query: 111 YSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMP 170
              ++ +        +G  LH + + +G+G  L +  ALVD+Y K   ++SAR +FD M 
Sbjct: 235 MLSLIISCGFVGAVQLGKRLHAYILRNGFGMSLALATALVDMYGKCGEIRSARAIFDSMK 294

Query: 171 EKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGM 230
            KD + W +MIS   +  C   +  +F  M R+ G   +  ++ ++L   A    L +G 
Sbjct: 295 NKDVMTWTAMISAYAQANCIDYAFQLFVQM-RDNGVRPNELTMVSLLSLCAVNGALDMGK 353

Query: 231 EIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNG 290
                  K G    V + T L+  Y+KCG++  A+ LF + +  D+ + N M++GY  +G
Sbjct: 354 WFHAYIDKQGVEVDVILKTALIDMYAKCGDISGAQRLFSEAIDRDICTWNVMMAGYGMHG 413

Query: 291 KTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLT--------NCIHSFCLKSGI 342
             E +L+LF ++     + N  T +G     +   H  L           IH F    G+
Sbjct: 414 YGEKALKLFTEMETLGVKPNDITFIG---ALHACSHAGLVVEGKGLFEKMIHDF----GL 466

Query: 343 VSNSSVLTALSTVYSRLNEMEAARKLFDESS-EKSLASWNAMIAG 386
           V        +  +  R   ++ A K+ +      ++A W AM+A 
Sbjct: 467 VPKVEHYGCMVDLLGRAGLLDEAYKMIESMPVTPNIAIWGAMLAA 511



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 56/217 (25%), Positives = 100/217 (46%), Gaps = 24/217 (11%)

Query: 396 AISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALID 455
           A++ +  M+   +  +   + S+L AC+Q+    +GK +H         S+++V  AL+ 
Sbjct: 93  ALNTYTYMRKLDIEVDSFIIPSVLKACSQISVARMGKEIHGFSVKNGLVSDVFVVNALMQ 152

Query: 456 MYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGL-------------------- 495
           MY++CG++V AR LFD MS +  V+W+TMI  Y    +G                     
Sbjct: 153 MYSECGSLVSARLLFDKMSERDVVSWSTMIRAYITLFYGFSQRSIVSWTAMIAGYIRCND 212

Query: 496 --EALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYA 553
             E  +LF  M+   + P+ +T LS++ +C   G V+ G  +  + I  +GF        
Sbjct: 213 LEEGERLFVRMIEENVFPNDITMLSLIISCGFVGAVQLGKRL-HAYILRNGFGMSLALAT 271

Query: 554 CMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGA 590
            +VD+ G+ G++  A      +        W A++ A
Sbjct: 272 ALVDMYGKCGEIRSARAIFDSMK-NKDVMTWTAMISA 307


>gi|147801171|emb|CAN62238.1| hypothetical protein VITISV_014689 [Vitis vinifera]
          Length = 957

 Score =  518 bits (1334), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 279/730 (38%), Positives = 430/730 (58%), Gaps = 11/730 (1%)

Query: 60  ARALFFSIP-KPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAA 118
           AR LF  +P K D+  +N +I  +S+N     ++  +  ++K  +L P+  TY+FV +A 
Sbjct: 234 ARQLFDRMPEKEDVVSWNSMISAYSSNGQSIEALRLFGEMQK-ASLAPN--TYTFV-AAL 289

Query: 119 SACCDRSI---GVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTV 175
            AC D S    G+ +H   + S Y  ++FV  AL+ +Y +F  +  A  +F  M + DT+
Sbjct: 290 QACEDSSFIKQGMFIHATVLKSSYYINVFVANALIAMYARFGKMGEAANIFYNMDDWDTI 349

Query: 176 LWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCL 235
            WNSM+SG ++N  + +++  + +M R+ G   D  +V +++ A A       GM+I   
Sbjct: 350 SWNSMLSGFVQNGLYHEALQFYHEM-RDAGQKPDLVAVISIIAASARSGNTLHGMQIHAY 408

Query: 236 GLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESS 295
            +K G    + V   LV  Y+K   ++  + +F  +   D++S   +I+G+  NG    +
Sbjct: 409 AMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQNGSHSRA 468

Query: 296 LRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTV 355
           L LFR++      ++   I  ++        +     IHS+ ++ G+ S+  +   +  V
Sbjct: 469 LELFREVQLEGIDLDVMMISSILLACSGLKLISSVKEIHSYIIRKGL-SDLVLQNGIVDV 527

Query: 356 YSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTV 415
           Y     ++ A ++F+    K + SW +MI+ Y  NGL  EA+ LF  M+ + V P+ +++
Sbjct: 528 YGECGNVDYAARMFELIEFKDVVSWTSMISCYVHNGLANEALELFHLMKETGVEPDSISL 587

Query: 416 SSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSH 475
            SILSA A L A+  GK +H  +  + F     +++ L+DMYA+CG + ++R +F+ + +
Sbjct: 588 VSILSAAASLSALKKGKEIHGFLIRKGFVLEGSLASTLVDMYARCGTLEKSRNVFNFIRN 647

Query: 476 KSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEI 535
           K  V W +MI+ YG+HG G  A+ LF  M    I P  + F++VLYACSH+GL+ EG   
Sbjct: 648 KDLVLWTSMINAYGMHGCGRAAIDLFRRMEDESIAPDHIAFVAVLYACSHSGLMNEGRRF 707

Query: 536 FQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHK 595
            +SM +++  +P  EHYAC+VD+LGRA  LE+A +F+KG+ VEP   VW ALLGAC IH 
Sbjct: 708 LESMKYEYQLEPWPEHYACLVDLLGRANHLEEAYQFVKGMEVEPTAEVWCALLGACQIHS 767

Query: 596 DTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLI 655
           +  L  +A++KL E+DPEN G +VL+SN+YSAER +     VR  +K   L K PGC+ I
Sbjct: 768 NKELGEIAAQKLLEMDPENPGNYVLVSNVYSAERRWKDVEXVRMRMKASGLKKNPGCSWI 827

Query: 656 EVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKM-REAGFQTETVTALHDVEEEEKELMMK 714
           EVG   H F + D+ HPQS  IY+ L ++  K+ +E G+  +T   LH+ +EEEK  M+ 
Sbjct: 828 EVGNKVHTFMARDKSHPQSYEIYSKLSQITEKLAKEGGYVAQTKFVLHNAKEEEKVQMLY 887

Query: 715 VHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFK 774
            HSE+LAIA+G++ T  G  +RI KNLRVC DCH   K ISK   R +V+RDANRFHHFK
Sbjct: 888 GHSERLAIAYGMLTTPEGASLRITKNLRVCGDCHNFCKLISKFFERELVMRDANRFHHFK 947

Query: 775 GGVCSCGDYW 784
           GGVCSCGD W
Sbjct: 948 GGVCSCGDVW 957



 Score =  256 bits (655), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 174/590 (29%), Positives = 304/590 (51%), Gaps = 19/590 (3%)

Query: 13  LSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATC----YARALFFSIP 68
           L L    K  S+  Q HA +I     N L     L+ RL      C     A  LF  +P
Sbjct: 85  LELCGSKKALSEGQQVHAHMIT---SNALFNSVFLSTRLVFMYGKCGCLVDAEKLFDGMP 141

Query: 69  KPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGV 128
              +F +N +I  +  N  P  S+  Y  +R  + +  D  T+  +L A     DR  G 
Sbjct: 142 HKTIFTWNAMIGAYVTNGEPLGSLELYREMRV-SGIPLDACTFPCILKACGLLKDRRYGA 200

Query: 129 LLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEK-DTVLWNSMISGLMKN 187
            +HG AI  GY S +FV  ++V +Y K + +  AR++FD+MPEK D V WNSMIS    N
Sbjct: 201 EVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISAYSSN 260

Query: 188 CCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYV 247
               +++ +FG+M +      ++ +  A L A  +   ++ GM I    LK  ++ +V+V
Sbjct: 261 GQSIEALRLFGEM-QKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSSYYINVFV 319

Query: 248 LTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAE 307
              L++ Y++ G++  A  +F ++   D IS N+M+SG+  NG    +L+ + ++  + +
Sbjct: 320 ANALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQ 379

Query: 308 RVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARK 367
           + +   ++ +I      G+      IH++ +K+G+ S+  V  +L  +Y++   M+    
Sbjct: 380 KPDLVAVISIIAASARSGNTLHGMQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDC 439

Query: 368 LFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGA 427
           +FD+  +K + SW  +IAG+ QNG    A+ LF+E+Q   +  + + +SSIL AC+ L  
Sbjct: 440 IFDKMPDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSILLACSGLKL 499

Query: 428 ISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISG 487
           IS  K +H  +  +   S++ +   ++D+Y +CGN+  A  +F+L+  K  V+W +MIS 
Sbjct: 500 ISSVKEIHSYIIRKGL-SDLVLQNGIVDVYGECGNVDYAARMFELIEFKDVVSWTSMISC 558

Query: 488 YGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKP 547
           Y  +G   EAL+LF  M  +G+ P  ++ +S+L A +    +++G EI   +I   GF  
Sbjct: 559 YVHNGLANEALELFHLMKETGVEPDSISLVSILSAAASLSALKKGKEIHGFLIRK-GFVL 617

Query: 548 LAEHYACMVDILGRAGQLEKA---LEFIKGLAVEPGPAVWGALLGACMIH 594
                + +VD+  R G LEK+     FI+   +     +W +++ A  +H
Sbjct: 618 EGSLASTLVDMYARCGTLEKSRNVFNFIRNKDL----VLWTSMINAYGMH 663



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 56/176 (31%), Positives = 89/176 (50%), Gaps = 2/176 (1%)

Query: 416 SSILSACAQLGAISLGKWVH-ELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMS 474
           SS+L  C    A+S G+ VH  ++ S    +++++ST L+ MY KCG +V+A +LFD M 
Sbjct: 82  SSVLELCGSKKALSEGQQVHAHMITSNALFNSVFLSTRLVFMYGKCGCLVDAEKLFDGMP 141

Query: 475 HKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDE 534
           HK+  TWN MI  Y  +G  L +L+L+ EM  SGI     TF  +L AC      R G E
Sbjct: 142 HKTIFTWNAMIGAYVTNGEPLGSLELYREMRVSGIPLDACTFPCILKACGLLKDRRYGAE 201

Query: 535 IFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGA 590
           +    I + G+  +      +V +  +   L  A +    +  +     W +++ A
Sbjct: 202 VHGLAIKE-GYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISA 256


>gi|225432742|ref|XP_002279134.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22690
           [Vitis vinifera]
          Length = 836

 Score =  518 bits (1333), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 283/809 (34%), Positives = 446/809 (55%), Gaps = 44/809 (5%)

Query: 16  LKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAH---RLSDFKATCYARALFFSIPKPD- 71
           L+  KT +QL Q H QI  +G     ST+TKL +    ++  ++  YAR  F  + K D 
Sbjct: 32  LRCCKTLNQLKQLHCQITKNGLDQIPSTLTKLVNAGAEIASPESLDYARKAF-ELFKEDV 90

Query: 72  -----LFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSI 126
                LF+ N +IRG+S+  + + +I  Y  +     +TP+++T+ FVLS  +       
Sbjct: 91  RSDDALFMLNSLIRGYSSAGLGREAILLYVRMLV-LGVTPNHYTFPFVLSGCTKIAAFCE 149

Query: 127 GVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMK 186
           G+ +HG  +  G   D+F+   L+  Y +   +    KVF+ M E++ V W S+I G  +
Sbjct: 150 GIQVHGSVVKMGLEEDVFIQNCLIHFYAECGHMDHGHKVFEGMSERNVVSWTSLICGYAR 209

Query: 187 NCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVY 246
               ++++ +F +MV   G    S ++  V+ A A++++L +G  +     +LG   +  
Sbjct: 210 GDRPKEAVSLFFEMVE-AGIRPSSVTMVCVISACAKLRDLDMGERVCAYIGELGLKLNKV 268

Query: 247 VLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASA 306
           ++  LV  Y KCG ++ A+ LF + V  +L+  N ++S Y   G    +L +  ++L   
Sbjct: 269 MVNALVDMYMKCGAIDAAKRLFDECVDRNLVLYNTILSNYARQGLAREALAILDEMLQQG 328

Query: 307 ERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAAR 366
            R +  T++  I        L      H + +++G+    S+   +  +Y +  + E A 
Sbjct: 329 PRPDRVTMLSAISASAQLVDLFYGKVCHGYVIRNGLEGWDSIGNVIIDMYMKCGKPEMAC 388

Query: 367 KLFDESSEKSLASWNAMIAGYTQNG-------------------------------LTEE 395
           ++FD  S K++ SWN++ AG+ +NG                               L E+
Sbjct: 389 RVFDLMSNKTVVSWNSLTAGFIRNGDVESAWEVFNQIPERNAVFWNTMISGLVQKSLFED 448

Query: 396 AISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALID 455
           AI LF+EMQ   +  + VT+  I SAC  LGA  L KWVH  ++      ++ ++TAL+D
Sbjct: 449 AIELFREMQGEGIKADRVTMMGIASACGYLGAPELAKWVHTYIEKNGIPCDMRLNTALVD 508

Query: 456 MYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVT 515
           M+A+CG+   A ++F+ M+ +    W   I    + G+G  A  LF++ML  G++P  V 
Sbjct: 509 MFARCGDPQSAMQVFNKMTERDVSAWTAAIGTMAMEGNGEGATGLFNQMLIQGVKPDVVL 568

Query: 516 FLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGL 575
           F+ VL ACSH G V +G  IF S++ DHG  P  EHY CMVD+LGRAG L +A + IK +
Sbjct: 569 FVQVLTACSHGGQVEQGLHIF-SLMEDHGISPQIEHYGCMVDLLGRAGLLREAFDLIKSM 627

Query: 576 AVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAA 635
            +EP   VWG+LL AC +HK+  +A  A+E++ EL P+  G HVLLSNIY++   +   A
Sbjct: 628 PMEPNDVVWGSLLAACRVHKNVEMATYAAERINELAPQRAGVHVLLSNIYASAGKWTDVA 687

Query: 636 TVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQT 695
            VR  ++++ + K PG + ++V G  H FTSGD+ HP+ T I  ML+++N +  +AG   
Sbjct: 688 RVRLNLREKGVRKVPGSSSVQVNGVIHEFTSGDESHPEMTHIALMLQEMNCRFSDAGHIP 747

Query: 696 ETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFIS 755
           +    L DV+E+EKE ++  HSEKLAIAFGLIAT     IR++KNLR+C DCH+  K  S
Sbjct: 748 DLSNVLLDVDEQEKEYLLSRHSEKLAIAFGLIATGRSMPIRVVKNLRMCSDCHSFAKMAS 807

Query: 756 KVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
            +  R I+VRD NRFH F+ G+CSC DYW
Sbjct: 808 IIYNREIIVRDNNRFHFFRQGLCSCCDYW 836


>gi|356540339|ref|XP_003538647.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g22690-like [Glycine max]
          Length = 836

 Score =  518 bits (1333), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 287/818 (35%), Positives = 445/818 (54%), Gaps = 40/818 (4%)

Query: 5   TPQSRNLFLSLLKGAKTQSQLTQTHAQIIIHGF-----QNDLSTVTKLAHRLSDFKATCY 59
            P +RN    LL   KT  +L Q H  ++  G       ++L+ +   + ++   ++  Y
Sbjct: 21  NPITRNSSSKLLVNCKTLKELKQLHCDMMKKGLLCHKPASNLNKLIASSVQIGTLESLDY 80

Query: 60  ARALFFSIP--KPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSA 117
           AR  F         LF++N +IRG+++  +   +I  Y  +     + PD +T+ F+LSA
Sbjct: 81  ARNAFGDDDGNMASLFMYNCLIRGYASAGLGDQAILLYVQMLV-MGIVPDKYTFPFLLSA 139

Query: 118 ASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLW 177
            S     S GV +HG  +  G   D+FV  +L+  Y +   V   RK+FD M E++ V W
Sbjct: 140 CSKILALSEGVQVHGAVLKMGLEGDIFVSNSLIHFYAECGKVDLGRKLFDGMLERNVVSW 199

Query: 178 NSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGL 237
            S+I+G       ++++ +F  M    G   +  ++  V+ A A++++L LG ++     
Sbjct: 200 TSLINGYSGRDLSKEAVSLFFQM-GEAGVEPNPVTMVCVISACAKLKDLELGKKVCSYIS 258

Query: 238 KLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLR 297
           +LG      ++  LV  Y KCG++  A  +F +    +L+  N ++S Y  +      L 
Sbjct: 259 ELGMELSTIMVNALVDMYMKCGDICAARQIFDECANKNLVMYNTIMSNYVHHEWASDVLV 318

Query: 298 LFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGI--------------- 342
           +  ++L    R +  T++  I      G L +    H++ L++G+               
Sbjct: 319 ILDEMLQKGPRPDKVTMLSTIAACAQLGDLSVGKSSHAYVLRNGLEGWDNISNAIIDMYM 378

Query: 343 --------------VSNSSVLTALSTVYS--RLNEMEAARKLFDESSEKSLASWNAMIAG 386
                         + N +V+T  S +    R  +ME A ++FDE  E+ L SWN MI  
Sbjct: 379 KCGKREAACKVFEHMPNKTVVTWNSLIAGLVRDGDMELAWRIFDEMLERDLVSWNTMIGA 438

Query: 387 YTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESN 446
             Q  + EEAI LF+EMQ   +  + VT+  I SAC  LGA+ L KWV   ++  +   +
Sbjct: 439 LVQVSMFEEAIELFREMQNQGIPGDRVTMVGIASACGYLGALDLAKWVCTYIEKNDIHVD 498

Query: 447 IYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLH 506
           + + TAL+DM+++CG+   A  +F  M  +    W   I    + G+   A++LF+EML 
Sbjct: 499 LQLGTALVDMFSRCGDPSSAMHVFKRMEKRDVSAWTAAIGVMAMEGNTEGAIELFNEMLE 558

Query: 507 SGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLE 566
             ++P  V F+++L ACSH G V +G ++F SM   HG +P   HY CMVD+LGRAG LE
Sbjct: 559 QKVKPDDVVFVALLTACSHGGSVDQGRQLFWSMEKAHGIRPHIVHYGCMVDLLGRAGLLE 618

Query: 567 KALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYS 626
           +A++ I+ + +EP   VWG+LL AC  HK+  LA  A+EKL +L PE VG HVLLSNIY+
Sbjct: 619 EAVDLIQSMPIEPNDVVWGSLLAACRKHKNVELAHYAAEKLTQLAPERVGIHVLLSNIYA 678

Query: 627 AERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNG 686
           +   +   A VR  +K++ + K PG + IEV G  H FTSGD+ H ++T I  MLE++N 
Sbjct: 679 SAGKWTDVARVRLQMKEKGVQKVPGSSSIEVQGLIHEFTSGDESHAENTHIGLMLEEINC 738

Query: 687 KMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLD 746
           ++ EAG+  +T   L DV+E+EKE ++  HSEKLA+A+GLI T  G  IR++KNLR+C D
Sbjct: 739 RLSEAGYVPDTTNVLLDVDEQEKEHLLSRHSEKLAMAYGLITTGQGIPIRVVKNLRMCSD 798

Query: 747 CHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           CH+  K +SK+  R I VRD NR+H FK G CSC DYW
Sbjct: 799 CHSFAKLVSKLYNREITVRDNNRYHFFKEGFCSCRDYW 836


>gi|359482011|ref|XP_002276416.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g11460-like [Vitis vinifera]
          Length = 629

 Score =  516 bits (1330), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 269/621 (43%), Positives = 387/621 (62%), Gaps = 16/621 (2%)

Query: 171 EKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRL-- 228
           +  T  WN+ +  L +   FQ+++ ++  M+ +G    DS +      A      L L  
Sbjct: 18  QNTTASWNARLRELARQRHFQEALNLYCQMLASG----DSPNAFTFPFAFKSCASLSLPL 73

Query: 229 -GMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDI--VRPDLISCNAMISG 285
            G ++    +K G     +V T L+S Y KC  +  A  +F +    R   +  NA+I+G
Sbjct: 74  AGSQLHGHVIKTGCEPEPFVQTSLISMYCKCSTIASARKVFDENHHSRNLAVCYNALIAG 133

Query: 286 YTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSN 345
           Y+ N +   ++ LFRQ+      VN+ T++GLIPV     HL     +H+  ++ G+  +
Sbjct: 134 YSLNSRFSDAVLLFRQMRKEGVSVNAVTMLGLIPVCAGPIHLGFGTSLHACSVRFGLDGD 193

Query: 346 SSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQA 405
            SV   L T+Y R   ++ ARKLFD   EK L +WNAMI+GY QNGL    + L+++M+ 
Sbjct: 194 LSVGNCLLTMYVRCGSVDFARKLFDGMPEKGLITWNAMISGYAQNGLAGHVLDLYRKMEF 253

Query: 406 SKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVE 465
           + + P+PVT+  +LS+CA LGA + G+ V + ++   F  N ++  ALI+MYA+CGN+V+
Sbjct: 254 TGIVPDPVTLVGVLSSCAHLGAHAAGREVEQRIELSGFGFNPFLKNALINMYARCGNLVK 313

Query: 466 ARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSH 525
           AR +FD M+ K+ ++W  +I+GYG+HG G  A+QLF EM+ S   P G  F+SVL ACSH
Sbjct: 314 ARAIFDGMTEKNVISWTAIIAGYGMHGQGELAVQLFDEMISSDELPDGAAFVSVLSACSH 373

Query: 526 AGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWG 585
           AGL  +G   F +M  D+G +P  EHY+C+VD+LGRAG+LE+A + I  ++VEP  AVWG
Sbjct: 374 AGLTEKGLYYFTAMERDYGLQPGPEHYSCVVDLLGRAGRLEEARKLIGSMSVEPDGAVWG 433

Query: 586 ALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRK 645
           ALLGAC IH++  LA +A EK+ E +P N+GY+VLLSNI+S   +      VR ++++RK
Sbjct: 434 ALLGACKIHRNVELAELAFEKVIEFEPTNIGYYVLLSNIFSEAGNMEGILRVRVMMRERK 493

Query: 646 LAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVE 705
           L K PGC+ +E  G  H+F +GD+ HPQ+  IY ML+ L   ++  G   +     +D E
Sbjct: 494 LKKEPGCSYVEYQGRIHLFLAGDRTHPQAQEIYHMLDGLEDIIKRRGGSND-----NDQE 548

Query: 706 EEEKELM--MKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIV 763
              +EL+  M VHSEKLAIAFGLI TEPGTEI +IKNLRVC DCH   K +S++  R +V
Sbjct: 549 SRNEELITGMGVHSEKLAIAFGLINTEPGTEITVIKNLRVCGDCHLFLKLVSEIVDRQLV 608

Query: 764 VRDANRFHHFKGGVCSCGDYW 784
           VRDA RFHHFK GVCSC DYW
Sbjct: 609 VRDATRFHHFKNGVCSCKDYW 629



 Score =  172 bits (435), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 113/391 (28%), Positives = 190/391 (48%), Gaps = 5/391 (1%)

Query: 105 TPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARK 164
           +P+ FT+ F   + ++      G  LHGH I +G   + FV  +L+ +Y K S + SARK
Sbjct: 53  SPNAFTFPFAFKSCASLSLPLAGSQLHGHVIKTGCEPEPFVQTSLISMYCKCSTIASARK 112

Query: 165 VFDKMPEKDT--VLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAE 222
           VFD+        V +N++I+G   N  F D++ +F  M R  G  +++ ++  ++P  A 
Sbjct: 113 VFDENHHSRNLAVCYNALIAGYSLNSRFSDAVLLFRQM-RKEGVSVNAVTMLGLIPVCAG 171

Query: 223 VQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAM 282
              L  G  +    ++ G    + V   L++ Y +CG V+ A  LF  +    LI+ NAM
Sbjct: 172 PIHLGFGTSLHACSVRFGLDGDLSVGNCLLTMYVRCGSVDFARKLFDGMPEKGLITWNAM 231

Query: 283 ISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGI 342
           ISGY  NG     L L+R++  +    +  T+VG++      G       +      SG 
Sbjct: 232 ISGYAQNGLAGHVLDLYRKMEFTGIVPDPVTLVGVLSSCAHLGAHAAGREVEQRIELSGF 291

Query: 343 VSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQE 402
             N  +  AL  +Y+R   +  AR +FD  +EK++ SW A+IAGY  +G  E A+ LF E
Sbjct: 292 GFNPFLKNALINMYARCGNLVKARAIFDGMTEKNVISWTAIIAGYGMHGQGELAVQLFDE 351

Query: 403 MQASKVAPNPVTVSSILSACAQLGAISLG-KWVHELVKSRNFESNIYVSTALIDMYAKCG 461
           M +S   P+     S+LSAC+  G    G  +   + +    +      + ++D+  + G
Sbjct: 352 MISSDELPDGAAFVSVLSACSHAGLTEKGLYYFTAMERDYGLQPGPEHYSCVVDLLGRAG 411

Query: 462 NIVEARELFDLMSHKSE-VTWNTMISGYGLH 491
            + EAR+L   MS + +   W  ++    +H
Sbjct: 412 RLEEARKLIGSMSVEPDGAVWGALLGACKIH 442



 Score =  109 bits (273), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 82/317 (25%), Positives = 148/317 (46%), Gaps = 12/317 (3%)

Query: 75  FNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHA 134
           +N +I G+S N     ++  +  +RK   ++ +  T   ++   +       G  LH  +
Sbjct: 127 YNALIAGYSLNSRFSDAVLLFRQMRKE-GVSVNAVTMLGLIPVCAGPIHLGFGTSLHACS 185

Query: 135 IVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSI 194
           +  G   DL VG  L+ +Y +   V  ARK+FD MPEK  + WN+MISG  +N      +
Sbjct: 186 VRFGLDGDLSVGNCLLTMYVRCGSVDFARKLFDGMPEKGLITWNAMISGYAQNGLAGHVL 245

Query: 195 WVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSF 254
            ++  M    G   D  ++  VL + A +     G E++      GF  + ++   L++ 
Sbjct: 246 DLYRKM-EFTGIVPDPVTLVGVLSSCAHLGAHAAGREVEQRIELSGFGFNPFLKNALINM 304

Query: 255 YSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTI 314
           Y++CG + +A  +F  +   ++IS  A+I+GY  +G+ E +++LF ++++S E  + +  
Sbjct: 305 YARCGNLVKARAIFDGMTEKNVISWTAIIAGYGMHGQGELAVQLFDEMISSDELPDGAAF 364

Query: 315 VGLIPV-----FYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLF 369
           V ++           G  + T     + L+ G    S V+  L     R   +E ARKL 
Sbjct: 365 VSVLSACSHAGLTEKGLYYFTAMERDYGLQPGPEHYSCVVDLL----GRAGRLEEARKLI 420

Query: 370 DESS-EKSLASWNAMIA 385
              S E   A W A++ 
Sbjct: 421 GSMSVEPDGAVWGALLG 437


>gi|296083564|emb|CBI23556.3| unnamed protein product [Vitis vinifera]
          Length = 827

 Score =  516 bits (1328), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 283/764 (37%), Positives = 451/764 (59%), Gaps = 9/764 (1%)

Query: 28  THAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSI-PKPDLFLFNVIIRGFSNNE 86
            H +++  G + D   +  L    S    T  AR +F  +  K DL  ++ ++  F+NN 
Sbjct: 66  VHRKLMQSGLELDSVVLNTLISLYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNS 125

Query: 87  MPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGY-GSDLFV 145
           M   +I  +  + +     P+ + ++ V+ A S      +G +++G  + +GY  +D+ V
Sbjct: 126 MEWQAIWTFLDMLE-LGFYPNEYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCV 184

Query: 146 GAALVDLYFKFSW-VKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNG 204
           G  L+D++ K S  + SA KVFDKMPE++ V W  MI+   +  C +D+I +F DM  +G
Sbjct: 185 GCELIDMFVKGSGDLGSAYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSG 244

Query: 205 GTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKC---GEV 261
               D  + ++VL A  E+  L LG ++    ++LG    V V   LV  Y+KC   G V
Sbjct: 245 YV-PDRFTYSSVLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSV 303

Query: 262 ERAELLFRDIVRPDLISCNAMISGYTCNGKTE-SSLRLFRQLLASAERVNSSTIVGLIPV 320
           + +  +F  +   +++S  A+I+ Y  +G+ +  ++ LF ++++   R N  +   ++  
Sbjct: 304 DDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKA 363

Query: 321 FYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASW 380
                  +    ++S+ +K GI S + V  +L ++Y+R   ME ARK FD   EK+L S+
Sbjct: 364 CGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSY 423

Query: 381 NAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKS 440
           NA++ GY +N  +EEA  LF E+  + +  +  T +S+LS  A +GA+  G+ +H  +  
Sbjct: 424 NAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLK 483

Query: 441 RNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQL 500
             ++SN  +  ALI MY++CGNI  A ++F+ M  ++ ++W +MI+G+  HG    AL++
Sbjct: 484 GGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEM 543

Query: 501 FSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILG 560
           F +ML +G +P+ +T+++VL ACSH G++ EG + F SM  +HG  P  EHYACMVD+LG
Sbjct: 544 FHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLG 603

Query: 561 RAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVL 620
           R+G L +A+EFI  + +     VW  LLGAC +H +T L R A+E + E +P++   ++L
Sbjct: 604 RSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYIL 663

Query: 621 LSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAM 680
           LSN++++   +     +R+ +K+R L K  GC+ IEV    H F  G+  HPQ+  IY  
Sbjct: 664 LSNLHASAGQWKDVVKIRKSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQE 723

Query: 681 LEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKN 740
           L++L  K++E G+  +T   LHD+EEE+KE  +  HSEK+A+AFGLI+T     IRI KN
Sbjct: 724 LDQLASKIKEMGYIPDTDFVLHDIEEEQKEQFLFQHSEKIAVAFGLISTSQSKPIRIFKN 783

Query: 741 LRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           LRVC DCHTA K+IS  TGR IVVRD+NRFHH K GVCSC DYW
Sbjct: 784 LRVCGDCHTAIKYISMATGREIVVRDSNRFHHIKNGVCSCNDYW 827



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 140/526 (26%), Positives = 246/526 (46%), Gaps = 12/526 (2%)

Query: 106 PDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKV 165
           PD  TYS +L +     +  +G L+H   + SG   D  V   L+ LY K    ++AR +
Sbjct: 42  PDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLISLYSKCGDTETARLI 101

Query: 166 FDKMPEK-DTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQ 224
           F+ M  K D V W++M+S    N     +IW F DM+   G + +    AAV+ A +   
Sbjct: 102 FEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLEL-GFYPNEYCFAAVIRACSNAN 160

Query: 225 ELRLGMEIQCLGLKLGFHD-HVYVLTGLVSFYSK-CGEVERAELLFRDIVRPDLISCNAM 282
              +G  I    +K G+ +  V V   L+  + K  G++  A  +F  +   +L++   M
Sbjct: 161 YAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNLVTWTLM 220

Query: 283 ISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGI 342
           I+ +   G    ++ LF  +  S    +  T   ++      G L L   +HS  ++ G+
Sbjct: 221 ITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLGL 280

Query: 343 VSNSSVLTALSTVYSRL---NEMEAARKLFDESSEKSLASWNAMIAGYTQNG-LTEEAIS 398
             +  V  +L  +Y++      ++ +RK+F++  E ++ SW A+I  Y Q+G   +EAI 
Sbjct: 281 ALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIE 340

Query: 399 LFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYA 458
           LF +M +  + PN  + SS+L AC  L     G+ V+         S   V  +LI MYA
Sbjct: 341 LFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYA 400

Query: 459 KCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLS 518
           + G + +AR+ FD++  K+ V++N ++ GY  +    EA  LF+E+  +GI  S  TF S
Sbjct: 401 RSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFAS 460

Query: 519 VLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVE 578
           +L   +  G + +G++I   ++   G+K        ++ +  R G +E A +    +  +
Sbjct: 461 LLSGAASIGAMGKGEQIHGRLLKG-GYKSNQCICNALISMYSRCGNIEAAFQVFNEME-D 518

Query: 579 PGPAVWGALLGACMIHKDTNLARVASEKLFE--LDPENVGYHVLLS 622
                W +++     H     A     K+ E    P  + Y  +LS
Sbjct: 519 RNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLS 564



 Score = 76.3 bits (186), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 45/147 (30%), Positives = 72/147 (48%), Gaps = 1/147 (0%)

Query: 391 GLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVS 450
           G    A S    M      P+  T S +L +C +     LGK VH  +     E +  V 
Sbjct: 23  GRLHHAFSTLDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVL 82

Query: 451 TALIDMYAKCGNIVEARELFDLMSHKSE-VTWNTMISGYGLHGHGLEALQLFSEMLHSGI 509
             LI +Y+KCG+   AR +F+ M +K + V+W+ M+S +  +    +A+  F +ML  G 
Sbjct: 83  NTLISLYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGF 142

Query: 510 RPSGVTFLSVLYACSHAGLVREGDEIF 536
            P+   F +V+ ACS+A     G+ I+
Sbjct: 143 YPNEYCFAAVIRACSNANYAWVGEIIY 169


>gi|15229764|ref|NP_187753.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169981|sp|Q9CAY1.1|PP223_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g11460
 gi|12322902|gb|AAG51440.1|AC008153_13 hypothetical protein; 50785-52656 [Arabidopsis thaliana]
 gi|332641528|gb|AEE75049.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 623

 Score =  516 bits (1328), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 260/610 (42%), Positives = 385/610 (63%), Gaps = 9/610 (1%)

Query: 177 WNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLG 236
           WN  +  L     F +SI ++  M+R+G +  D+ S   +L + A +     G ++ C  
Sbjct: 21  WNVRLRELAYQSLFSESISLYRSMLRSGSS-PDAFSFPFILKSCASLSLPVSGQQLHCHV 79

Query: 237 LKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISC--NAMISGYTCNGKTES 294
            K G     +VLT L+S Y KCG V  A  +F +  +   +S   NA+ISGYT N K   
Sbjct: 80  TKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTD 139

Query: 295 SLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALST 354
           +  +FR++  +   V+S T++GL+P+     +L L   +H  C+K G+ S  +VL +  T
Sbjct: 140 AAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFIT 199

Query: 355 VYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVT 414
           +Y +   +EA R+LFDE   K L +WNA+I+GY+QNGL  + + L+++M++S V P+P T
Sbjct: 200 MYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFT 259

Query: 415 VSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMS 474
           + S+LS+CA LGA  +G  V +LV+S  F  N++VS A I MYA+CGN+ +AR +FD+M 
Sbjct: 260 LVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMP 319

Query: 475 HKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDE 534
            KS V+W  MI  YG+HG G   L LF +M+  GIRP G  F+ VL ACSH+GL  +G E
Sbjct: 320 VKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLE 379

Query: 535 IFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIH 594
           +F++M  ++  +P  EHY+C+VD+LGRAG+L++A+EFI+ + VEP  AVWGALLGAC IH
Sbjct: 380 LFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKIH 439

Query: 595 KDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTL 654
           K+ ++A +A  K+ E +P N+GY+VL+SNIYS  ++      +R ++++R   K PG + 
Sbjct: 440 KNVDMAELAFAKVIEFEPNNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKPGYSY 499

Query: 655 IEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMK 714
           +E  G  H+F +GD+ H Q+  ++ ML++L   + E     +          EE     +
Sbjct: 500 VEHKGRVHLFLAGDRSHEQTEEVHRMLDELETSVMELAGNMDCDRG------EEVSSTTR 553

Query: 715 VHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFK 774
            HSE+LAIAFG++ + PGTEI +IKNLRVC DCH   K +SK+  R  VVRDA+RFH+FK
Sbjct: 554 EHSERLAIAFGILNSIPGTEILVIKNLRVCEDCHVFLKQVSKIVDRQFVVRDASRFHYFK 613

Query: 775 GGVCSCGDYW 784
            GVCSC DYW
Sbjct: 614 DGVCSCKDYW 623



 Score =  172 bits (437), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 124/476 (26%), Positives = 222/476 (46%), Gaps = 8/476 (1%)

Query: 75  FNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHA 134
           +NV +R  +   +   SI  Y  + ++ + +PD F++ F+L + ++      G  LH H 
Sbjct: 21  WNVRLRELAYQSLFSESISLYRSMLRSGS-SPDAFSFPFILKSCASLSLPVSGQQLHCHV 79

Query: 135 IVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKD--TVLWNSMISGLMKNCCFQD 192
              G  ++ FV  AL+ +Y K   V  ARKVF++ P+    +V +N++ISG   N    D
Sbjct: 80  TKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTD 139

Query: 193 SIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLV 252
           + ++F  M +  G  +DS ++  ++P     + L LG  +    +K G    V VL   +
Sbjct: 140 AAYMFRRM-KETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFI 198

Query: 253 SFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSS 312
           + Y KCG VE    LF ++    LI+ NA+ISGY+ NG     L L+ Q+ +S    +  
Sbjct: 199 TMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPF 258

Query: 313 TIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDES 372
           T+V ++      G   + + +      +G V N  V  A  ++Y+R   +  AR +FD  
Sbjct: 259 TLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIM 318

Query: 373 SEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLG- 431
             KSL SW AMI  Y  +G+ E  + LF +M    + P+      +LSAC+  G    G 
Sbjct: 319 PVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGL 378

Query: 432 KWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSE-VTWNTMISGYGL 490
           +    + +    E      + L+D+  + G + EA E  + M  + +   W  ++    +
Sbjct: 379 ELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKI 438

Query: 491 HGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFK 546
           H +   A   F++++     P+ + +  ++         +EG    + M+ +  F+
Sbjct: 439 HKNVDMAELAFAKVIE--FEPNNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFR 492



 Score =  100 bits (250), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 72/291 (24%), Positives = 135/291 (46%), Gaps = 4/291 (1%)

Query: 27  QTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLF--LFNVIIRGFSN 84
           Q H  +   G + +   +T L            AR +F   P+       +N +I G++ 
Sbjct: 74  QLHCHVTKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTA 133

Query: 85  NEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLF 144
           N     +   +  + K T ++ D+ T   ++   +      +G  LHG  +  G  S++ 
Sbjct: 134 NSKVTDAAYMFRRM-KETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVA 192

Query: 145 VGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNG 204
           V  + + +Y K   V++ R++FD+MP K  + WN++ISG  +N    D + ++  M ++ 
Sbjct: 193 VLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQM-KSS 251

Query: 205 GTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERA 264
           G   D  ++ +VL + A +   ++G E+  L    GF  +V+V    +S Y++CG + +A
Sbjct: 252 GVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKA 311

Query: 265 ELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIV 315
             +F  +    L+S  AMI  Y  +G  E  L LF  ++    R + +  V
Sbjct: 312 RAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFV 362


>gi|359497798|ref|XP_003635646.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like, partial [Vitis vinifera]
          Length = 809

 Score =  516 bits (1328), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 283/764 (37%), Positives = 451/764 (59%), Gaps = 9/764 (1%)

Query: 28  THAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSI-PKPDLFLFNVIIRGFSNNE 86
            H +++  G + D   +  L    S    T  AR +F  +  K DL  ++ ++  F+NN 
Sbjct: 48  VHRKLMQSGLELDSVVLNTLISLYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNS 107

Query: 87  MPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGY-GSDLFV 145
           M   +I  +  + +     P+ + ++ V+ A S      +G +++G  + +GY  +D+ V
Sbjct: 108 MEWQAIWTFLDMLE-LGFYPNEYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCV 166

Query: 146 GAALVDLYFKFSW-VKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNG 204
           G  L+D++ K S  + SA KVFDKMPE++ V W  MI+   +  C +D+I +F DM  +G
Sbjct: 167 GCELIDMFVKGSGDLGSAYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSG 226

Query: 205 GTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKC---GEV 261
               D  + ++VL A  E+  L LG ++    ++LG    V V   LV  Y+KC   G V
Sbjct: 227 YV-PDRFTYSSVLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSV 285

Query: 262 ERAELLFRDIVRPDLISCNAMISGYTCNGKTE-SSLRLFRQLLASAERVNSSTIVGLIPV 320
           + +  +F  +   +++S  A+I+ Y  +G+ +  ++ LF ++++   R N  +   ++  
Sbjct: 286 DDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKA 345

Query: 321 FYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASW 380
                  +    ++S+ +K GI S + V  +L ++Y+R   ME ARK FD   EK+L S+
Sbjct: 346 CGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSY 405

Query: 381 NAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKS 440
           NA++ GY +N  +EEA  LF E+  + +  +  T +S+LS  A +GA+  G+ +H  +  
Sbjct: 406 NAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLK 465

Query: 441 RNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQL 500
             ++SN  +  ALI MY++CGNI  A ++F+ M  ++ ++W +MI+G+  HG    AL++
Sbjct: 466 GGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEM 525

Query: 501 FSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILG 560
           F +ML +G +P+ +T+++VL ACSH G++ EG + F SM  +HG  P  EHYACMVD+LG
Sbjct: 526 FHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLG 585

Query: 561 RAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVL 620
           R+G L +A+EFI  + +     VW  LLGAC +H +T L R A+E + E +P++   ++L
Sbjct: 586 RSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYIL 645

Query: 621 LSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAM 680
           LSN++++   +     +R+ +K+R L K  GC+ IEV    H F  G+  HPQ+  IY  
Sbjct: 646 LSNLHASAGQWKDVVKIRKSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQE 705

Query: 681 LEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKN 740
           L++L  K++E G+  +T   LHD+EEE+KE  +  HSEK+A+AFGLI+T     IRI KN
Sbjct: 706 LDQLASKIKEMGYIPDTDFVLHDIEEEQKEQFLFQHSEKIAVAFGLISTSQSKPIRIFKN 765

Query: 741 LRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           LRVC DCHTA K+IS  TGR IVVRD+NRFHH K GVCSC DYW
Sbjct: 766 LRVCGDCHTAIKYISMATGREIVVRDSNRFHHIKNGVCSCNDYW 809



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 140/526 (26%), Positives = 246/526 (46%), Gaps = 12/526 (2%)

Query: 106 PDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKV 165
           PD  TYS +L +     +  +G L+H   + SG   D  V   L+ LY K    ++AR +
Sbjct: 24  PDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLISLYSKCGDTETARLI 83

Query: 166 FDKMPEK-DTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQ 224
           F+ M  K D V W++M+S    N     +IW F DM+   G + +    AAV+ A +   
Sbjct: 84  FEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLEL-GFYPNEYCFAAVIRACSNAN 142

Query: 225 ELRLGMEIQCLGLKLGFHD-HVYVLTGLVSFYSK-CGEVERAELLFRDIVRPDLISCNAM 282
              +G  I    +K G+ +  V V   L+  + K  G++  A  +F  +   +L++   M
Sbjct: 143 YAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNLVTWTLM 202

Query: 283 ISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGI 342
           I+ +   G    ++ LF  +  S    +  T   ++      G L L   +HS  ++ G+
Sbjct: 203 ITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLGL 262

Query: 343 VSNSSVLTALSTVYSRL---NEMEAARKLFDESSEKSLASWNAMIAGYTQNG-LTEEAIS 398
             +  V  +L  +Y++      ++ +RK+F++  E ++ SW A+I  Y Q+G   +EAI 
Sbjct: 263 ALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIE 322

Query: 399 LFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYA 458
           LF +M +  + PN  + SS+L AC  L     G+ V+         S   V  +LI MYA
Sbjct: 323 LFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYA 382

Query: 459 KCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLS 518
           + G + +AR+ FD++  K+ V++N ++ GY  +    EA  LF+E+  +GI  S  TF S
Sbjct: 383 RSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFAS 442

Query: 519 VLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVE 578
           +L   +  G + +G++I   ++   G+K        ++ +  R G +E A +    +  +
Sbjct: 443 LLSGAASIGAMGKGEQIHGRLLKG-GYKSNQCICNALISMYSRCGNIEAAFQVFNEME-D 500

Query: 579 PGPAVWGALLGACMIHKDTNLARVASEKLFE--LDPENVGYHVLLS 622
                W +++     H     A     K+ E    P  + Y  +LS
Sbjct: 501 RNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLS 546



 Score = 76.3 bits (186), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 45/147 (30%), Positives = 72/147 (48%), Gaps = 1/147 (0%)

Query: 391 GLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVS 450
           G    A S    M      P+  T S +L +C +     LGK VH  +     E +  V 
Sbjct: 5   GRLHHAFSTLDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVL 64

Query: 451 TALIDMYAKCGNIVEARELFDLMSHKSE-VTWNTMISGYGLHGHGLEALQLFSEMLHSGI 509
             LI +Y+KCG+   AR +F+ M +K + V+W+ M+S +  +    +A+  F +ML  G 
Sbjct: 65  NTLISLYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGF 124

Query: 510 RPSGVTFLSVLYACSHAGLVREGDEIF 536
            P+   F +V+ ACS+A     G+ I+
Sbjct: 125 YPNEYCFAAVIRACSNANYAWVGEIIY 151


>gi|359495457|ref|XP_003634994.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g63370-like [Vitis vinifera]
          Length = 993

 Score =  515 bits (1327), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 277/730 (37%), Positives = 429/730 (58%), Gaps = 11/730 (1%)

Query: 60  ARALFFSIP-KPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAA 118
           AR LF  +P K D+  +N +I  +S+N     ++  +  ++K  +L P+  TY+FV +A 
Sbjct: 270 ARQLFDRMPEKEDVVSWNSMISAYSSNGQSIEALRLFGEMQK-ASLAPN--TYTFV-AAL 325

Query: 119 SACCDRSI---GVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTV 175
            AC D S    G+ +H   + S Y  ++FV  AL+ +Y +F  +  A  +F  M + DT+
Sbjct: 326 QACEDSSFIKQGMFIHATVLKSSYYINVFVANALIAMYARFGKMGEAANIFYNMDDWDTI 385

Query: 176 LWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCL 235
            WNSM+SG ++N  + +++  + +M R+ G   D  +V +++ A A       GM+I   
Sbjct: 386 SWNSMLSGFVQNGLYHEALQFYHEM-RDAGQKPDLVAVISIIAASARSGNTLNGMQIHAY 444

Query: 236 GLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESS 295
            +K G    + V   LV  Y+K   ++  + +F  +   D++S   +I+G+  NG    +
Sbjct: 445 AMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQNGSHSRA 504

Query: 296 LRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTV 355
           L LFR++      ++   I  ++        +     IHS+ ++ G+ S+  +   +  V
Sbjct: 505 LELFREVQLEGIDLDVMMISSILLACSGLKLISSVKEIHSYIIRKGL-SDLVLQNGIVDV 563

Query: 356 YSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTV 415
           Y     ++ A ++F+    K + SW +MI+ Y  NGL  EA+ LF  M+ + V P+ +++
Sbjct: 564 YGECGNVDYAARMFELIEFKDVVSWTSMISCYVHNGLANEALELFHLMKETGVEPDSISL 623

Query: 416 SSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSH 475
            SILSA A L A+  GK +H  +  + F     +++ L+DMYA+CG + ++R +F+ + +
Sbjct: 624 VSILSAAASLSALKKGKEIHGFLIRKGFVLEGSLASTLVDMYARCGTLEKSRNVFNFIRN 683

Query: 476 KSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEI 535
           K  V W +MI+ YG+HG G  A+ LF  M    I P  + F++VLYACSH+GL+ EG   
Sbjct: 684 KDLVLWTSMINAYGMHGCGRAAIDLFRRMEDESIAPDHIAFVAVLYACSHSGLMNEGRRF 743

Query: 536 FQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHK 595
            +SM +++  +P  EHY C+VD+LGRA  LE+A +F+KG+ VEP   VW ALLGAC IH 
Sbjct: 744 LESMKYEYQLEPWPEHYVCLVDLLGRANHLEEAYQFVKGMEVEPTAEVWCALLGACQIHS 803

Query: 596 DTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLI 655
           +  L  +A++KL E+DPEN G +VL+SN+Y+AER +     VR  +K   L K PGC+ I
Sbjct: 804 NKELGEIAAQKLLEMDPENPGNYVLVSNVYAAERRWKDVEEVRMRMKASGLKKNPGCSWI 863

Query: 656 EVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKM-REAGFQTETVTALHDVEEEEKELMMK 714
           EVG   H F + D+ HPQS  IY+ L ++  K+ +E G+  +T   LH+ +EEEK  M+ 
Sbjct: 864 EVGNKVHTFMARDKSHPQSYEIYSKLSQITEKLAKEGGYVAQTKFVLHNAKEEEKVQMLY 923

Query: 715 VHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFK 774
            HSE+LAIA+G++ T  G  +RI KNLRVC DCH   K ISK   R +V+RDANRFHHFK
Sbjct: 924 GHSERLAIAYGMLTTPEGASLRITKNLRVCGDCHNFCKLISKFFERELVMRDANRFHHFK 983

Query: 775 GGVCSCGDYW 784
           GGVCSCGD W
Sbjct: 984 GGVCSCGDVW 993



 Score =  257 bits (656), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 171/587 (29%), Positives = 303/587 (51%), Gaps = 13/587 (2%)

Query: 13  LSLLKGAKTQSQLTQTHAQIII-HGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPD 71
           L L    K  S+  Q HA +I  +   N +   T+L            A  LF  +P   
Sbjct: 121 LELCGSKKALSEGQQVHAHMITSNALFNSVFLSTRLVFMYGKCGCLVDAEKLFDGMPHKT 180

Query: 72  LFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLH 131
           +F +N +I  +  N  P  S+  Y  +R  + +  D  T+  +L A     DR  G  +H
Sbjct: 181 IFTWNAMIGAYVTNGEPLGSLELYREMRV-SGIPLDACTFPCILKACGLLKDRRCGAEVH 239

Query: 132 GHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEK-DTVLWNSMISGLMKNCCF 190
           G AI  GY S +FV  ++V +Y K + +  AR++FD+MPEK D V WNSMIS    N   
Sbjct: 240 GLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISAYSSNGQS 299

Query: 191 QDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTG 250
            +++ +FG+M +      ++ +  A L A  +   ++ GM I    LK  ++ +V+V   
Sbjct: 300 IEALRLFGEM-QKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSSYYINVFVANA 358

Query: 251 LVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVN 310
           L++ Y++ G++  A  +F ++   D IS N+M+SG+  NG    +L+ + ++  + ++ +
Sbjct: 359 LIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQKPD 418

Query: 311 SSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFD 370
              ++ +I      G+      IH++ +K+G+ S+  V  +L  +Y++   M+    +FD
Sbjct: 419 LVAVISIIAASARSGNTLNGMQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFD 478

Query: 371 ESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISL 430
           +  +K + SW  +IAG+ QNG    A+ LF+E+Q   +  + + +SSIL AC+ L  IS 
Sbjct: 479 KMPDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSILLACSGLKLISS 538

Query: 431 GKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGL 490
            K +H  +  +   S++ +   ++D+Y +CGN+  A  +F+L+  K  V+W +MIS Y  
Sbjct: 539 VKEIHSYIIRKGL-SDLVLQNGIVDVYGECGNVDYAARMFELIEFKDVVSWTSMISCYVH 597

Query: 491 HGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAE 550
           +G   EAL+LF  M  +G+ P  ++ +S+L A +    +++G EI   +I   GF     
Sbjct: 598 NGLANEALELFHLMKETGVEPDSISLVSILSAAASLSALKKGKEIHGFLIRK-GFVLEGS 656

Query: 551 HYACMVDILGRAGQLEKA---LEFIKGLAVEPGPAVWGALLGACMIH 594
             + +VD+  R G LEK+     FI+   +     +W +++ A  +H
Sbjct: 657 LASTLVDMYARCGTLEKSRNVFNFIRNKDL----VLWTSMINAYGMH 699



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 56/176 (31%), Positives = 89/176 (50%), Gaps = 2/176 (1%)

Query: 416 SSILSACAQLGAISLGKWVH-ELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMS 474
           SS+L  C    A+S G+ VH  ++ S    +++++ST L+ MY KCG +V+A +LFD M 
Sbjct: 118 SSVLELCGSKKALSEGQQVHAHMITSNALFNSVFLSTRLVFMYGKCGCLVDAEKLFDGMP 177

Query: 475 HKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDE 534
           HK+  TWN MI  Y  +G  L +L+L+ EM  SGI     TF  +L AC      R G E
Sbjct: 178 HKTIFTWNAMIGAYVTNGEPLGSLELYREMRVSGIPLDACTFPCILKACGLLKDRRCGAE 237

Query: 535 IFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGA 590
           +    I + G+  +      +V +  +   L  A +    +  +     W +++ A
Sbjct: 238 VHGLAIKE-GYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISA 292


>gi|357131877|ref|XP_003567560.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Brachypodium distachyon]
          Length = 808

 Score =  515 bits (1327), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 285/730 (39%), Positives = 429/730 (58%), Gaps = 8/730 (1%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           AR LF  IP P +  +N +IR +S    P  ++  Y  LR+     P+N+T+ FVL A S
Sbjct: 82  ARHLFDQIPAPGIHDYNALIRAYSLRG-PALALRLYRSLRRRRLPQPNNYTFPFVLKACS 140

Query: 120 ACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNS 179
           A  D      +H HA  +G  +DLFV  ALVD+Y K +  + A  VF +MP +D V WN+
Sbjct: 141 ALLDLRSARAVHCHAARAGLHADLFVSTALVDVYAKCASFRHAATVFRRMPARDVVAWNA 200

Query: 180 MISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLK- 238
           M++G   +  + D+I     M  +     +++++ A+LP +A+   L  G  +    ++ 
Sbjct: 201 MLAGYALHGKYSDTIACLLLMQDDHAP--NASTLVALLPLLAQHGALSQGRAVHAYSVRA 258

Query: 239 LGFHDH---VYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESS 295
              HDH   V V T L+  Y+KCG +  A  +F  +   + ++ +A++ G+   G+   +
Sbjct: 259 CSLHDHKDGVLVGTALLDMYAKCGHLVYASRVFEAMAVRNEVTWSALVGGFVLCGRMLEA 318

Query: 296 LRLFRQLLASAE-RVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALST 354
             LF+ +LA     ++ +++   +        L L   +H+   KSG+ ++ +   +L +
Sbjct: 319 FSLFKDMLAQGLCFLSPTSVASALRACANLSDLCLGKQLHALLAKSGLHTDLTAGNSLLS 378

Query: 355 VYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVT 414
           +Y++   ++ A  LFD+   K   S++A+++GY QNG  +EA  +F++MQA  V P+  T
Sbjct: 379 MYAKAGLIDQATTLFDQMVVKDTVSYSALVSGYVQNGKADEAFRVFRKMQACNVQPDVAT 438

Query: 415 VSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMS 474
           + S++ AC+ L A+  GK  H  V  R   S   +  ALIDMYAKCG I  +R++FD+M 
Sbjct: 439 MVSLIPACSHLAALQHGKCGHGSVIVRGIASETSICNALIDMYAKCGRIDLSRQIFDVMP 498

Query: 475 HKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDE 534
            +  V+WNTMI+GYG+HG G EA  LF +M H    P  VTF+ ++ ACSH+GLV EG  
Sbjct: 499 ARDIVSWNTMIAGYGIHGLGKEATALFLDMKHQACEPDDVTFICLISACSHSGLVTEGKR 558

Query: 535 IFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIH 594
            F  M H +G  P  EHY  MVD+L R G L++A +FI+G+ ++    VWGALLGAC +H
Sbjct: 559 WFHMMAHKYGITPRMEHYIGMVDLLARGGFLDEAYQFIQGMPLKADVRVWGALLGACRVH 618

Query: 595 KDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTL 654
           K+ +L +  S  + +L PE  G  VLLSNI+SA   + +AA VR + K++   K+PGC+ 
Sbjct: 619 KNIDLGKQVSSMIQQLGPEGTGNFVLLSNIFSAAGRFDEAAEVRIIQKEQGFKKSPGCSW 678

Query: 655 IEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMK 714
           IE+ G+ H F  GD+ H QS+ IY  L+ +   + + G++ +T   L DVEEEEKE  + 
Sbjct: 679 IEINGSLHAFIGGDRSHAQSSEIYQELDNILVDINKLGYRADTSFVLQDVEEEEKEKALL 738

Query: 715 VHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFK 774
            HSEKLAIAFG++       I + KNLRVC DCHT  K+++ V  R I+VRDANRFHHFK
Sbjct: 739 YHSEKLAIAFGVLTLSEDKTIFVTKNLRVCGDCHTVIKYMTLVRKRAIIVRDANRFHHFK 798

Query: 775 GGVCSCGDYW 784
            G CSCGD+W
Sbjct: 799 NGQCSCGDFW 808



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 91/328 (27%), Positives = 157/328 (47%), Gaps = 11/328 (3%)

Query: 258 CGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGL 317
           CG++  A  LF  I  P +   NA+I  Y+  G   +             + N+ T   +
Sbjct: 76  CGDLSLARHLFDQIPAPGIHDYNALIRAYSLRGPALALRLYRSLRRRRLPQPNNYTFPFV 135

Query: 318 IPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSL 377
           +        L     +H    ++G+ ++  V TAL  VY++      A  +F     + +
Sbjct: 136 LKACSALLDLRSARAVHCHAARAGLHADLFVSTALVDVYAKCASFRHAATVFRRMPARDV 195

Query: 378 ASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVH-- 435
            +WNAM+AGY  +G   + I+    MQ    APN  T+ ++L   AQ GA+S G+ VH  
Sbjct: 196 VAWNAMLAGYALHGKYSDTIACLLLMQDDH-APNASTLVALLPLLAQHGALSQGRAVHAY 254

Query: 436 --ELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGH 493
                   + +  + V TAL+DMYAKCG++V A  +F+ M+ ++EVTW+ ++ G+ L G 
Sbjct: 255 SVRACSLHDHKDGVLVGTALLDMYAKCGHLVYASRVFEAMAVRNEVTWSALVGGFVLCGR 314

Query: 494 GLEALQLFSEMLHSG---IRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAE 550
            LEA  LF +ML  G   + P+ V   S L AC++   +  G ++  +++   G      
Sbjct: 315 MLEAFSLFKDMLAQGLCFLSPTSVA--SALRACANLSDLCLGKQL-HALLAKSGLHTDLT 371

Query: 551 HYACMVDILGRAGQLEKALEFIKGLAVE 578
               ++ +  +AG +++A      + V+
Sbjct: 372 AGNSLLSMYAKAGLIDQATTLFDQMVVK 399



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 45/174 (25%), Positives = 77/174 (44%), Gaps = 1/174 (0%)

Query: 27  QTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNE 86
           Q HA +   G   DL+    L    +       A  LF  +   D   ++ ++ G+  N 
Sbjct: 356 QLHALLAKSGLHTDLTAGNSLLSMYAKAGLIDQATTLFDQMVVKDTVSYSALVSGYVQNG 415

Query: 87  MPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVG 146
               +   +  ++    + PD  T   ++ A S       G   HG  IV G  S+  + 
Sbjct: 416 KADEAFRVFRKMQACN-VQPDVATMVSLIPACSHLAALQHGKCGHGSVIVRGIASETSIC 474

Query: 147 AALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDM 200
            AL+D+Y K   +  +R++FD MP +D V WN+MI+G   +   +++  +F DM
Sbjct: 475 NALIDMYAKCGRIDLSRQIFDVMPARDIVSWNTMIAGYGIHGLGKEATALFLDM 528


>gi|297743497|emb|CBI36364.3| unnamed protein product [Vitis vinifera]
          Length = 832

 Score =  514 bits (1325), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 280/765 (36%), Positives = 439/765 (57%), Gaps = 35/765 (4%)

Query: 29  HAQIIIHGFQNDLSTVTK---LAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNN 85
           H Q+I +G+  D   +TK   L  R       CYAR LF  +P+ +L  +N +I  ++  
Sbjct: 94  HTQMISNGYNPDAYLMTKILMLYARSGCLDDLCYARKLFEEMPERNLTAWNTMILAYARV 153

Query: 86  EMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFV 145
           +    +   +  + K   + PDNFT++  L    A   R  G  +H   I  G+  D FV
Sbjct: 154 DDYMEAWGIFDRMLK-IGVCPDNFTFASALRVCGALRSRDGGKQVHSKLIACGFKGDTFV 212

Query: 146 GAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRN-G 204
           G AL+D+Y K    +S  KVFD+M E++ V WNS+IS   +   F D++ +F  M  +  
Sbjct: 213 GNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAEAQFGHFNDALVLFLRMQESED 272

Query: 205 GTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERA 264
           G   D  +   +L   A  +    G +I    ++     ++ V T LV  YS+CG +  A
Sbjct: 273 GIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRANITKNIIVETELVHMYSECGRLNYA 332

Query: 265 ELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPF 324
           + +F  +   +  S N+MI GY  NG+T+ +LRLF+Q+  +  + +  ++  ++      
Sbjct: 333 KEIFNRMAERNAYSWNSMIEGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSL 392

Query: 325 GHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDES--SEKSLASWNA 382
                   +H+F +++ +     +   L  +Y++   M+ A K++D++   +++ A WN+
Sbjct: 393 SDSQKGRELHNFIVRNTMEEEGILQVVLVDMYAKCGSMDYAWKVYDQTIKKDRNTALWNS 452

Query: 383 MIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRN 442
           ++AGY   GL +E+ + F EM  S +  + +T+ +I++                      
Sbjct: 453 ILAGYANKGLKKESFNHFLEMLESDIEYDVLTMVTIVNL--------------------- 491

Query: 443 FESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFS 502
               + + TAL+DMY+KCG I +AR +FD M+ K+ V+WN MISGY  HG   EAL L+ 
Sbjct: 492 ----LVLETALVDMYSKCGAITKARTVFDNMNGKNIVSWNAMISGYSKHGCSKEALILYE 547

Query: 503 EMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRA 562
           EM   G+ P+ VTFL++L ACSH GLV EG  IF SM  D+  +  AEHY CMVD+LGRA
Sbjct: 548 EMPKKGMYPNEVTFLAILSACSHTGLVEEGLRIFTSMQEDYNIEAKAEHYTCMVDLLGRA 607

Query: 563 GQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLS 622
           G+LE A EF++ + +EP  + WGALLGAC +HKD ++ R+A+++LFELDP+N G +V++S
Sbjct: 608 GRLEDAKEFVEKMPIEPEVSTWGALLGACRVHKDMDMGRLAAQRLFELDPQNPGPYVIMS 667

Query: 623 NIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLE 682
           NIY+A   + +   +RQ++K + + K PG + IE+     +F +G + HP++  IY  L 
Sbjct: 668 NIYAAAGRWKEVEDIRQMMKMKGVKKDPGVSWIEINSEIQIFHAGSKTHPKTEEIYNNLR 727

Query: 683 KLNGKMREAGFQTET---VTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIK 739
            L  + +  G+  +T   +  + D++EEE+E  +  HSE+LA++ GLI+    + IR+ K
Sbjct: 728 HLTLQSKGLGYIPDTSFILQNVKDIKEEEEEEYLLQHSERLALSLGLISLPKKSTIRVFK 787

Query: 740 NLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           NLR+C DCHTATKFISK+TGR I+ RD NRFHHF+ G CSCGDYW
Sbjct: 788 NLRICGDCHTATKFISKITGRRIIARDTNRFHHFENGKCSCGDYW 832



 Score =  112 bits (280), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 109/470 (23%), Positives = 199/470 (42%), Gaps = 69/470 (14%)

Query: 12  FLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPD 71
            L+L    +  +Q  Q HA +I      ++   T+L H  S+     YA+ +F  + + +
Sbjct: 284 LLTLCANQRNDNQGRQIHAHLIRANITKNIIVETELVHMYSECGRLNYAKEIFNRMAERN 343

Query: 72  LFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLH 131
            + +N +I G+  N   + ++  +  ++ N  + PD F+ S +LS+  +  D   G  LH
Sbjct: 344 AYSWNSMIEGYQQNGETQEALRLFKQMQLN-GIKPDCFSLSSMLSSCVSLSDSQKGRELH 402

Query: 132 GHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKD--TVLWNSMISGLMKNCC 189
              + +    +  +   LVD+Y K   +  A KV+D+  +KD  T LWNS+++G      
Sbjct: 403 NFIVRNTMEEEGILQVVLVDMYAKCGSMDYAWKVYDQTIKKDRNTALWNSILAGYANKGL 462

Query: 190 FQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLT 249
            ++S   F +M       L+S     VL  V  V  L L                    T
Sbjct: 463 KKESFNHFLEM-------LESDIEYDVLTMVTIVNLLVLE-------------------T 496

Query: 250 GLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERV 309
            LV  YSKCG + +A  +F ++   +++S NAMISGY+ +G ++ +L L+ ++       
Sbjct: 497 ALVDMYSKCGAITKARTVFDNMNGKNIVSWNAMISGYSKHGCSKEALILYEEMPKKGMYP 556

Query: 310 NSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLF 369
           N  T + +           L+ C H+  ++ G+            +++ + E        
Sbjct: 557 NEVTFLAI-----------LSACSHTGLVEEGL-----------RIFTSMQE-------- 586

Query: 370 DESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAIS 429
           D + E     +  M+    + G  E+A    ++M    + P   T  ++L AC     + 
Sbjct: 587 DYNIEAKAEHYTCMVDLLGRAGRLEDAKEFVEKM---PIEPEVSTWGALLGACRVHKDMD 643

Query: 430 LGKWVHELVKSRNFE---SNIYVSTALIDMYAKCGNIVEARELFDLMSHK 476
           +G+    L   R FE    N      + ++YA  G   E  ++  +M  K
Sbjct: 644 MGR----LAAQRLFELDPQNPGPYVIMSNIYAAAGRWKEVEDIRQMMKMK 689


>gi|328774749|gb|AEB39774.1| pentatricopeptide repeat protein 65 [Funaria hygrometrica]
          Length = 771

 Score =  514 bits (1324), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 266/688 (38%), Positives = 401/688 (58%), Gaps = 5/688 (0%)

Query: 101 NTALTPDNFTYSFVLSAASACCDR----SIGVLLHGHAIVSGYGSDLFVGAALVDLYFKF 156
           NT +      YS V       C R      G  +H   + SG   + ++   L+ +Y K 
Sbjct: 85  NTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAILKSGIQPNRYLENTLLSMYAKC 144

Query: 157 SWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAV 216
             +  AR+VFD + +++ V W +MI   +      ++   +  M +  G   D  +  ++
Sbjct: 145 GSLTDARRVFDGIRDRNIVSWTAMIEAFVAGNQNLEAYKCYETM-KLAGCKPDKVTFVSL 203

Query: 217 LPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDL 276
           L A    + L++G ++     K G      V T LV  Y+KCG++ +A+++F  +   ++
Sbjct: 204 LNAFTNPELLQVGQKVHMEIAKAGLELEPRVGTSLVGMYAKCGDISKAQVIFDKLPEKNV 263

Query: 277 ISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSF 336
           ++   +I+GY   G+ + +L L  ++  +    N  T   ++        L     +H +
Sbjct: 264 VTWTLLIAGYAQQGQVDVALELLEKMQQAEVAPNKITYTSILQGCTTPLALEHGKKVHRY 323

Query: 337 CLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEA 396
            ++SG      V+ AL T+Y +   ++ ARKLF +   + + +W AM+ GY Q G  +EA
Sbjct: 324 IIQSGYGREIWVVNALITMYCKCGGLKEARKLFGDLPHRDVVTWTAMVTGYAQLGFHDEA 383

Query: 397 ISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDM 456
           I LF+ MQ   + P+ +T +S L++C+    +  GK +H+ +    +  ++Y+ +AL+ M
Sbjct: 384 IDLFRRMQQQGIKPDKMTFTSALTSCSSPAFLQEGKSIHQQLVHAGYSLDVYLQSALVSM 443

Query: 457 YAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTF 516
           YAKCG++ +AR +F+ MS ++ V W  MI+G   HG   EAL+ F +M   GI+P  VTF
Sbjct: 444 YAKCGSMDDARLVFNQMSERNVVAWTAMITGCAQHGRCREALEYFEQMKKQGIKPDKVTF 503

Query: 517 LSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLA 576
            SVL AC+H GLV EG + F+SM  D+G KP+ EHY+C VD+LGRAG LE+A   I  + 
Sbjct: 504 TSVLSACTHVGLVEEGRKHFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEAENVILTMP 563

Query: 577 VEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAAT 636
            +PGP+VWGALL AC IH D      A+E + +LDP++ G +V LSNIY+A   Y  A  
Sbjct: 564 FQPGPSVWGALLSACRIHSDVERGERAAENVLKLDPDDDGAYVALSNIYAAAGRYEDAEK 623

Query: 637 VRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTE 696
           VRQV++KR + K PG + IEV G  HVF   D+ HP++  IYA L KL  +++E G+  +
Sbjct: 624 VRQVMEKRDVVKEPGQSWIEVDGKVHVFHVEDKSHPEAKEIYAELGKLTEQIKEQGYVPD 683

Query: 697 TVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISK 756
           T   LHDV+EE+K   +  HSE+LAI +GL+ T PGT IRI+KNLRVC DCHTA+KFISK
Sbjct: 684 TRFVLHDVDEEQKVQTLCSHSERLAITYGLMKTPPGTPIRIVKNLRVCGDCHTASKFISK 743

Query: 757 VTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           V GR I+ RDA+RFHHF  GVCSCGD+W
Sbjct: 744 VVGREIIARDAHRFHHFVDGVCSCGDFW 771


>gi|15234006|ref|NP_193610.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75206861|sp|Q9SN39.1|PP320_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g18750, chloroplastic; Flags: Precursor
 gi|4539394|emb|CAB37460.1| putative protein [Arabidopsis thaliana]
 gi|7268669|emb|CAB78877.1| putative protein [Arabidopsis thaliana]
 gi|332658686|gb|AEE84086.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 871

 Score =  514 bits (1323), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 282/785 (35%), Positives = 445/785 (56%), Gaps = 13/785 (1%)

Query: 6   PQSRNLFLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFF 65
           P++    L L   +K+     +    I  +GF  D +  +KL+   ++      A  +F 
Sbjct: 94  PRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFD 153

Query: 66  SIPKPDLFLFNVIIRGFSNNEMPKS-----SICFYTHLRKNTALTPDNFTYSFVLSAASA 120
            +       +N+++     NE+ KS     SI  +  +  ++ +  D++T+S V  + S+
Sbjct: 154 EVKIEKALFWNILM-----NELAKSGDFSGSIGLFKKM-MSSGVEMDSYTFSCVSKSFSS 207

Query: 121 CCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSM 180
                 G  LHG  + SG+G    VG +LV  Y K   V SARKVFD+M E+D + WNS+
Sbjct: 208 LRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSI 267

Query: 181 ISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLG 240
           I+G + N   +  + VF  M+ +G   +D  ++ +V    A+ + + LG  +  +G+K  
Sbjct: 268 INGYVSNGLAEKGLSVFVQMLVSG-IEIDLATIVSVFAGCADSRLISLGRAVHSIGVKAC 326

Query: 241 FHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFR 300
           F         L+  YSKCG+++ A+ +FR++    ++S  +MI+GY   G    +++LF 
Sbjct: 327 FSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFE 386

Query: 301 QLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLN 360
           ++       +  T+  ++     +  L     +H +  ++ +  +  V  AL  +Y++  
Sbjct: 387 EMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCG 446

Query: 361 EMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEM-QASKVAPNPVTVSSIL 419
            M+ A  +F E   K + SWN +I GY++N    EA+SLF  + +  + +P+  TV+ +L
Sbjct: 447 SMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVL 506

Query: 420 SACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEV 479
            ACA L A   G+ +H  +    + S+ +V+ +L+DMYAKCG ++ A  LFD ++ K  V
Sbjct: 507 PACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLV 566

Query: 480 TWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSM 539
           +W  MI+GYG+HG G EA+ LF++M  +GI    ++F+S+LYACSH+GLV EG   F  M
Sbjct: 567 SWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIM 626

Query: 540 IHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNL 599
            H+   +P  EHYAC+VD+L R G L KA  FI+ + + P   +WGALL  C IH D  L
Sbjct: 627 RHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKL 686

Query: 600 ARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGG 659
           A   +EK+FEL+PEN GY+VL++NIY+    + Q   +R+ + +R L K PGC+ IE+ G
Sbjct: 687 AEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKG 746

Query: 660 TPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEK 719
             ++F +GD  +P++  I A L K+  +M E G+   T  AL D EE EKE  +  HSEK
Sbjct: 747 RVNIFVAGDSSNPETENIEAFLRKVRARMIEEGYSPLTKYALIDAEEMEKEEALCGHSEK 806

Query: 720 LAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCS 779
           LA+A G+I++  G  IR+ KNLRVC DCH   KF+SK+T R IV+RD+NRFH FK G CS
Sbjct: 807 LAMALGIISSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLRDSNRFHQFKDGHCS 866

Query: 780 CGDYW 784
           C  +W
Sbjct: 867 CRGFW 871



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 43/172 (25%), Positives = 80/172 (46%), Gaps = 9/172 (5%)

Query: 374 EKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKW 433
           ++S+   N  +  + ++G  E A+ L     + K   +P T+ S+L  CA   ++  GK 
Sbjct: 58  DRSVTDANTQLRRFCESGNLENAVKLL--CVSGKWDIDPRTLCSVLQLCADSKSLKDGKE 115

Query: 434 VHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGH 493
           V   ++   F  +  + + L  MY  CG++ EA  +FD +  +  + WN +++     G 
Sbjct: 116 VDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGD 175

Query: 494 GLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGF 545
              ++ LF +M+ SG+     TF  V  + S    V  G+++       HGF
Sbjct: 176 FSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQL-------HGF 220


>gi|357519003|ref|XP_003629790.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355523812|gb|AET04266.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 908

 Score =  513 bits (1322), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 274/770 (35%), Positives = 442/770 (57%), Gaps = 3/770 (0%)

Query: 13  LSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDL 72
           L L    K+     + H+ II +G   D +   KL     +       R +F  I    +
Sbjct: 101 LQLCAEKKSLEDGKRVHSVIISNGISVDEALGAKLVFMYVNCGDLVQGRKIFDKIMNDKV 160

Query: 73  FLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHG 132
           FL+N+++  ++     + S+  +  ++K   +  + +T++ VL   +A         +HG
Sbjct: 161 FLWNLLMSEYAKIGNFRESVSLFKKMQK-LGVVGNCYTFTCVLKCFAALGKVKECKRVHG 219

Query: 133 HAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQD 192
           + +  G+GS+  V  +L+  YFKF  V+SA  +FD++ E D V WNSMI+G + N    +
Sbjct: 220 YVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSGN 279

Query: 193 SIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLV 252
            + +F  M+  G   +D T++ +VL A A +  L LG  +   G+K  F + V     L+
Sbjct: 280 GLEIFIQMLILG-VEVDLTTLVSVLVACANIGNLSLGRALHGFGVKACFSEEVVFSNTLL 338

Query: 253 SFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSS 312
             YSKCG +  A  +F  +    ++S  ++I+ Y   G    ++ LF ++ +   R +  
Sbjct: 339 DMYSKCGNLNGATEVFVKMGDTTIVSWTSIIAAYVREGLYSDAIGLFDEMQSKGVRPDIY 398

Query: 313 TIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDES 372
           T+  ++        L     +HS+ +K+G+ SN  V  AL  +Y++   +E AR +F + 
Sbjct: 399 TVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKI 458

Query: 373 SEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGK 432
             K + SWN MI GY+QN L  EA+ LF +MQ  +  P+ +T++ +L ACA L A+  G+
Sbjct: 459 PVKDIVSWNTMIGGYSQNLLPNEALELFLDMQ-KQFKPDDITMACVLPACAGLAALDKGR 517

Query: 433 WVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHG 492
            +H  +  R + S+++V+ AL+DMYAKCG +V A+ LFD++  K  ++W  MI+GYG+HG
Sbjct: 518 EIHGHILRRGYFSDLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAGYGMHG 577

Query: 493 HGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHY 552
            G EA+  F+EM  +GI P   +F ++L ACSH+GL+ EG + F SM ++ G +P  EHY
Sbjct: 578 FGNEAISTFNEMRIAGIEPDESSFSAILNACSHSGLLNEGWKFFNSMRNECGVEPKLEHY 637

Query: 553 ACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDP 612
           AC+VD+L R G L KA +FI+ + ++P   +WG LL  C IH D  LA   +E +FEL+P
Sbjct: 638 ACVVDLLARMGNLSKAYKFIESMPIKPDTTIWGVLLSGCRIHHDVKLAEKVAEHIFELEP 697

Query: 613 ENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHP 672
           +N  Y+V+L+N+Y+    + +   +R+ ++KR   + PGC+ IEVGG  ++F +G+  HP
Sbjct: 698 DNTRYYVVLANVYAEAEKWEEVKKLRKRMQKRGFKQNPGCSWIEVGGKFNIFVAGNSKHP 757

Query: 673 QSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPG 732
           Q+  I  +L KL  +M+   + +     L + ++ EKE++   HSEK A+AFG++   PG
Sbjct: 758 QAKKIDVLLSKLTMQMQNEDYSSMFRYVLINEDDMEKEMIQCGHSEKSAMAFGILNLPPG 817

Query: 733 TEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGD 782
             +R+ KN RVC DCH   KF+SK T   IV+RD+NRFHHFK G+CSC D
Sbjct: 818 RTVRVSKNRRVCGDCHEMGKFMSKTTKMEIVLRDSNRFHHFKDGLCSCRD 867



 Score =  233 bits (593), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 166/534 (31%), Positives = 261/534 (48%), Gaps = 26/534 (4%)

Query: 52  SDFKATCYARALFFSIPKPDLFL---------FNVIIRGFSNNEMPK-SSICFYTHLRKN 101
           S++    + R +FF  P+    L         F       + N+  K +  C    LR  
Sbjct: 21  SNYAKKSHNRFIFFKQPRRTCLLHSTVCVSPSFTNTTHSVTQNQNAKINKFCEMGDLRNA 80

Query: 102 TALTPDNFTYSFVL----SAASACCDRSI---GVLLHGHAIVSGYGSDLFVGAALVDLYF 154
             L   + +Y   L    S    C ++     G  +H   I +G   D  +GA LV +Y 
Sbjct: 81  IELLTKSKSYELGLNSYCSVLQLCAEKKSLEDGKRVHSVIISNGISVDEALGAKLVFMYV 140

Query: 155 KFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNG--GTWLDSTS 212
               +   RK+FDK+      LWN ++S   K   F++S+ +F  M + G  G     T 
Sbjct: 141 NCGDLVQGRKIFDKIMNDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTC 200

Query: 213 VAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIV 272
           V     A+ +V+E +    +    LKLGF  +  V+  L++ Y K G VE A  LF ++ 
Sbjct: 201 VLKCFAALGKVKECK---RVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELS 257

Query: 273 RPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNC 332
            PD++S N+MI+G   NG + + L +F Q+L     V+ +T+V ++      G+L L   
Sbjct: 258 EPDVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVACANIGNLSLGRA 317

Query: 333 IHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGL 392
           +H F +K+           L  +YS+   +  A ++F +  + ++ SW ++IA Y + GL
Sbjct: 318 LHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSIIAAYVREGL 377

Query: 393 TEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTA 452
             +AI LF EMQ+  V P+  TV+SI+ ACA   ++  G+ VH  V      SN+ V+ A
Sbjct: 378 YSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNA 437

Query: 453 LIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPS 512
           LI+MYAKCG++ EAR +F  +  K  V+WNTMI GY  +    EAL+LF +M     +P 
Sbjct: 438 LINMYAKCGSVEEARLVFSKIPVKDIVSWNTMIGGYSQNLLPNEALELFLDM-QKQFKPD 496

Query: 513 GVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYAC-MVDILGRAGQL 565
            +T   VL AC+    + +G EI   ++    F  L  H AC +VD+  + G L
Sbjct: 497 DITMACVLPACAGLAALDKGREIHGHILRRGYFSDL--HVACALVDMYAKCGLL 548



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 106/380 (27%), Positives = 184/380 (48%), Gaps = 2/380 (0%)

Query: 211 TSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRD 270
            S  +VL   AE + L  G  +  + +  G      +   LV  Y  CG++ +   +F  
Sbjct: 95  NSYCSVLQLCAEKKSLEDGKRVHSVIISNGISVDEALGAKLVFMYVNCGDLVQGRKIFDK 154

Query: 271 IVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLT 330
           I+   +   N ++S Y   G    S+ LF+++       N  T   ++  F   G +   
Sbjct: 155 IMNDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKEC 214

Query: 331 NCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQN 390
             +H + LK G  SN++V+ +L   Y +   +E+A  LFDE SE  + SWN+MI G   N
Sbjct: 215 KRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVN 274

Query: 391 GLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVS 450
           G +   + +F +M    V  +  T+ S+L ACA +G +SLG+ +H       F   +  S
Sbjct: 275 GFSGNGLEIFIQMLILGVEVDLTTLVSVLVACANIGNLSLGRALHGFGVKACFSEEVVFS 334

Query: 451 TALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIR 510
             L+DMY+KCGN+  A E+F  M   + V+W ++I+ Y   G   +A+ LF EM   G+R
Sbjct: 335 NTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSIIAAYVREGLYSDAIGLFDEMQSKGVR 394

Query: 511 PSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALE 570
           P   T  S+++AC+ +  + +G ++   +I +     L    A ++++  + G +E+A  
Sbjct: 395 PDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNA-LINMYAKCGSVEEARL 453

Query: 571 FIKGLAVEPGPAVWGALLGA 590
               + V+     W  ++G 
Sbjct: 454 VFSKIPVKD-IVSWNTMIGG 472


>gi|357475445|ref|XP_003608008.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355509063|gb|AES90205.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1183

 Score =  513 bits (1320), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 275/770 (35%), Positives = 441/770 (57%), Gaps = 3/770 (0%)

Query: 13   LSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDL 72
            L L    K+     + H+ II +G   D +   KL     +       R +F  I    +
Sbjct: 376  LQLCAEKKSLEDGKRVHSVIISNGISIDEALGAKLVFMYVNCGDLVQGRKIFDKIMNDKV 435

Query: 73   FLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHG 132
            FL+N+++  ++     + S+  +  ++K   +  + +T++ VL   +A         +HG
Sbjct: 436  FLWNLLMSEYAKIGNFRESVSLFKKMQK-LGVVGNCYTFTCVLKCFAALGKVKECKRVHG 494

Query: 133  HAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQD 192
            + +  G+GS+  V  +L+  YFKF  V+SA  +FD++ E D V WNSMI+G + N    +
Sbjct: 495  YVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSGN 554

Query: 193  SIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLV 252
             + +F  M+   G  +D T++ +VL A A +  L LG  +   G+K  F + V     L+
Sbjct: 555  GLEIFIQMLI-LGVEVDLTTLVSVLVAWANIGNLSLGRALHGFGVKACFSEEVVFSNTLL 613

Query: 253  SFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSS 312
              YSKCG +  A  +F  +    ++S  + I+ Y   G    ++ LF ++ +   R +  
Sbjct: 614  DMYSKCGNLNGATEVFVKMGDTTIVSWTSTIAAYVREGLYSDAIGLFDEMQSKGVRPDIY 673

Query: 313  TIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDES 372
            T+  ++        L     +HS+ +K+G+ SN  V  AL  +Y++   +E AR +F + 
Sbjct: 674  TVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKI 733

Query: 373  SEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGK 432
              K + SWN MI GY+QN L  EA+ LF +MQ  +  P+ +T++ +L ACA L A+  G+
Sbjct: 734  PVKDIVSWNTMIGGYSQNSLPNEALELFLDMQ-KQFKPDDITMACVLPACAGLAALDKGR 792

Query: 433  WVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHG 492
             +H  +  R + S+++V+ AL+DMYAKCG +V A+ LFD++  K  ++W  MI+GYG+HG
Sbjct: 793  EIHGHILRRGYFSDLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAGYGMHG 852

Query: 493  HGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHY 552
             G EA+  F+EM  +GI P   +F  +L ACSH+GL+ EG + F SM ++ G +P  EHY
Sbjct: 853  FGNEAISTFNEMRIAGIEPDESSFSVILNACSHSGLLNEGWKFFNSMRNECGVEPKLEHY 912

Query: 553  ACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDP 612
            AC+VD+L R G L KA +FI+ + ++P   +WG LL  C IH D  LA   +E +FEL+P
Sbjct: 913  ACVVDLLARMGNLSKAYKFIESMPIKPDTTIWGVLLSGCRIHHDVKLAEKVAEHIFELEP 972

Query: 613  ENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHP 672
            +N  Y+V+L+N+Y+    + +   +R+ ++KR   + PGC+ IEVGG  ++F +G+  HP
Sbjct: 973  DNTRYYVVLANVYAEAEKWEEVKKLRKRMQKRGFKQNPGCSWIEVGGKFNIFVAGNSKHP 1032

Query: 673  QSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPG 732
            Q+  I  +L KL  +M+   + +     L + ++ EKE++   HSEK A+AFG++   PG
Sbjct: 1033 QAKRIDVLLRKLTMQMQNEDYFSMFRYVLINEDDMEKEMIQCGHSEKSAMAFGILNLPPG 1092

Query: 733  TEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGD 782
              +R+ KN RVC DCH   KF+SK T R IV+RD+NRFHHFK G+CSC D
Sbjct: 1093 RTVRVSKNQRVCGDCHEMGKFMSKTTKREIVLRDSNRFHHFKDGLCSCRD 1142



 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 173/593 (29%), Positives = 285/593 (48%), Gaps = 29/593 (4%)

Query: 52  SDFKATCYARALFFSIPKPDLFL---------FNVIIRGFSNNEMPK-SSICFYTHLRKN 101
           S++    + R +FF  P+    L         F       + N+  K +  C    LR  
Sbjct: 296 SNYTKKSHNRFIFFKQPRRTCLLHSTVCVSPSFTNTTHSVTQNQNAKINKFCEMGDLRNA 355

Query: 102 TALTPDNFTYSFVL----SAASACCDRSI---GVLLHGHAIVSGYGSDLFVGAALVDLYF 154
             L   + +Y   L    S    C ++     G  +H   I +G   D  +GA LV +Y 
Sbjct: 356 IELLTKSKSYELGLNSYCSVLQLCAEKKSLEDGKRVHSVIISNGISIDEALGAKLVFMYV 415

Query: 155 KFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNG--GTWLDSTS 212
               +   RK+FDK+      LWN ++S   K   F++S+ +F  M + G  G     T 
Sbjct: 416 NCGDLVQGRKIFDKIMNDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTC 475

Query: 213 VAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIV 272
           V     A+ +V+E +    +    LKLGF  +  V+  L++ Y K G VE A  LF ++ 
Sbjct: 476 VLKCFAALGKVKECK---RVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELS 532

Query: 273 RPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNC 332
            PD++S N+MI+G   NG + + L +F Q+L     V+ +T+V ++  +   G+L L   
Sbjct: 533 EPDVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVAWANIGNLSLGRA 592

Query: 333 IHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGL 392
           +H F +K+           L  +YS+   +  A ++F +  + ++ SW + IA Y + GL
Sbjct: 593 LHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSTIAAYVREGL 652

Query: 393 TEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTA 452
             +AI LF EMQ+  V P+  TV+SI+ ACA   ++  G+ VH  V      SN+ V+ A
Sbjct: 653 YSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNA 712

Query: 453 LIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPS 512
           LI+MYAKCG++ EAR +F  +  K  V+WNTMI GY  +    EAL+LF +M     +P 
Sbjct: 713 LINMYAKCGSVEEARLVFSKIPVKDIVSWNTMIGGYSQNSLPNEALELFLDM-QKQFKPD 771

Query: 513 GVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYAC-MVDILGRAGQLEKALEF 571
            +T   VL AC+    + +G EI   ++    F  L  H AC +VD+  + G L  A + 
Sbjct: 772 DITMACVLPACAGLAALDKGREIHGHILRRGYFSDL--HVACALVDMYAKCGLLVLA-QL 828

Query: 572 IKGLAVEPGPAVWGALLGACMIHKDTN--LARVASEKLFELDPENVGYHVLLS 622
           +  +  +     W  ++    +H   N  ++     ++  ++P+   + V+L+
Sbjct: 829 LFDMIPKKDLISWTVMIAGYGMHGFGNEAISTFNEMRIAGIEPDESSFSVILN 881


>gi|297835272|ref|XP_002885518.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331358|gb|EFH61777.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 904

 Score =  513 bits (1320), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 279/806 (34%), Positives = 450/806 (55%), Gaps = 37/806 (4%)

Query: 14  SLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHR---LSDFKATCYARALFFSIPK- 69
           S LK  KT  +L   H  +   G  +D+S +TKL  R   L   ++  +A+ +F +    
Sbjct: 36  SSLKNCKTIDELKMFHLSLTKQGLDDDVSAITKLVARSCELGTRESLSFAKEVFENGESY 95

Query: 70  PDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVL 129
              F++N +IRG++++ + K +I  +  +  N+ ++PD +T+ F LS  +   D+  G+ 
Sbjct: 96  GTCFMYNSLIRGYASSGLCKEAILLFIRMM-NSGISPDKYTFPFGLSVCAKSRDKGNGIQ 154

Query: 130 LHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCC 189
           +HG  I   Y  DLFV  +LV  Y +   +  ARKVFD+M E++ V W SMI G  +   
Sbjct: 155 IHGLIIKMDYAKDLFVQNSLVHFYAECGELDCARKVFDEMSERNVVSWTSMICGYARREF 214

Query: 190 FQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLT 249
            +D++ +F  MVR+     +S ++  V+ A A++++L  G ++       G   +  +++
Sbjct: 215 AKDAVDLFFRMVRDEDVIPNSVTMVCVISACAKLEDLETGEKVYDFIRDSGIEVNDLMIS 274

Query: 250 GLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERV 309
            LV  Y KC  ++ A+ LF +    +L  CNAM S Y   G T+ +L +   ++ S  R 
Sbjct: 275 ALVDMYMKCNAIDIAKRLFDEYGASNLDLCNAMASNYVRQGLTKEALGVLNLMMDSGIRP 334

Query: 310 NSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLF 369
           +  +++  I       ++      H + L++G  S  ++  AL  +Y + +  + A ++F
Sbjct: 335 DRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIF 394

Query: 370 DESSEKSLASWNAMIAGYTQNG-------------------------------LTEEAIS 398
           D  S K++ +WN+++AGY +NG                               + EEAI 
Sbjct: 395 DRMSNKTVVTWNSIVAGYIENGEVDAAWETFNTMPEKNIVSWNTIISALVQENMYEEAIE 454

Query: 399 LFQEMQASK-VAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMY 457
           +F  MQ+ + V  + VT+ SI SAC  LGA+ L KW++  ++    + ++ + T L+DM+
Sbjct: 455 VFHYMQSQECVNVDGVTMMSIASACGHLGALDLAKWIYYYIEKNRIQLDVRLGTTLVDMF 514

Query: 458 AKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFL 517
           ++CG+   A  +F+ ++++    W   I    + G+   A++LF+EM+  G++P GV F+
Sbjct: 515 SRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNVERAIELFNEMIEQGLKPDGVVFI 574

Query: 518 SVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAV 577
             L AC H GLV++G EIF SM   HG  P   HY CMVD+LGRAG LE+AL+ IK +  
Sbjct: 575 GALTACCHGGLVQQGKEIFNSMEKLHGVSPEDVHYGCMVDLLGRAGLLEEALQLIKDMPT 634

Query: 578 EPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATV 637
           EP   +W +LL AC +  +  +A  A+EK+  L PE  G +VLLSN+Y++   +   A V
Sbjct: 635 EPNDVIWNSLLAACRVQGNVEMAAFAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKV 694

Query: 638 RQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTET 697
           R  +K++ L K PG ++I++ G  H FTSGD+ HP+   I AML++L+ +  + G   + 
Sbjct: 695 RLSMKEKGLRKPPGTSVIQIRGKTHEFTSGDESHPEMRKIEAMLDELSQRASDLGHVPDL 754

Query: 698 VTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKV 757
              L DV+E+EK  M+  HSEKLA+AFGLI++  GT IRI+KNLRVC  CH+  KF SKV
Sbjct: 755 SNVLMDVDEQEKIFMLSRHSEKLAMAFGLISSNKGTTIRIVKNLRVCSYCHSFAKFASKV 814

Query: 758 TGRVIVVRDANRFHHFKGGVCSCGDY 783
             R I++RD NRFH  + G CSC D+
Sbjct: 815 YNREIILRDNNRFHFIRQGKCSCSDF 840



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 107/515 (20%), Positives = 228/515 (44%), Gaps = 35/515 (6%)

Query: 13  LSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDL 72
           LS+   ++ +    Q H  II   +  DL     L H  ++      AR +F  + + ++
Sbjct: 140 LSVCAKSRDKGNGIQIHGLIIKMDYAKDLFVQNSLVHFYAECGELDCARKVFDEMSERNV 199

Query: 73  FLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHG 132
             +  +I G++  E  K ++  +  + ++  + P++ T   V+SA +   D   G  ++ 
Sbjct: 200 VSWTSMICGYARREFAKDAVDLFFRMVRDEDVIPNSVTMVCVISACAKLEDLETGEKVYD 259

Query: 133 HAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQD 192
               SG   +  + +ALVD+Y K + +  A+++FD+    +  L N+M S  ++    ++
Sbjct: 260 FIRDSGIEVNDLMISALVDMYMKCNAIDIAKRLFDEYGASNLDLCNAMASNYVRQGLTKE 319

Query: 193 SIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLV 252
           ++ V  +++ + G   D  S+ + + + ++++ +  G       L+ GF     +   L+
Sbjct: 320 ALGVL-NLMMDSGIRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALI 378

Query: 253 SFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQL---------- 302
             Y KC   + A  +F  +    +++ N++++GY  NG+ +++   F  +          
Sbjct: 379 DMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYIENGEVDAAWETFNTMPEKNIVSWNT 438

Query: 303 --------------------LASAERVNSS--TIVGLIPVFYPFGHLHLTNCIHSFCLKS 340
                               + S E VN    T++ +       G L L   I+ +  K+
Sbjct: 439 IISALVQENMYEEAIEVFHYMQSQECVNVDGVTMMSIASACGHLGALDLAKWIYYYIEKN 498

Query: 341 GIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLF 400
            I  +  + T L  ++SR  + E+A  +F+  + + +++W A I      G  E AI LF
Sbjct: 499 RIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNVERAIELF 558

Query: 401 QEMQASKVAPNPVTVSSILSACAQLGAISLGKWV-HELVKSRNFESNIYVSTALIDMYAK 459
            EM    + P+ V     L+AC   G +  GK + + + K             ++D+  +
Sbjct: 559 NEMIEQGLKPDGVVFIGALTACCHGGLVQQGKEIFNSMEKLHGVSPEDVHYGCMVDLLGR 618

Query: 460 CGNIVEARELF-DLMSHKSEVTWNTMISGYGLHGH 493
            G + EA +L  D+ +  ++V WN++++   + G+
Sbjct: 619 AGLLEEALQLIKDMPTEPNDVIWNSLLAACRVQGN 653


>gi|225456890|ref|XP_002277458.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
           [Vitis vinifera]
          Length = 698

 Score =  512 bits (1318), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 253/623 (40%), Positives = 380/623 (60%), Gaps = 1/623 (0%)

Query: 162 ARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVA 221
           A  +F ++ E D+  +N MI G        ++I +F +M  N     D  +   +L   +
Sbjct: 77  AVSIFRQIDEPDSPAYNIMIRGFTLKQSPHEAILLFKEMHENS-VQPDEFTFPCILKVCS 135

Query: 222 EVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNA 281
            +Q L  G +I  L +K GF  H +V   L+  Y+ CGEVE A  +F ++   ++ + N+
Sbjct: 136 RLQALSEGEQIHALIMKCGFGSHGFVKNTLIHMYANCGEVEVARRVFDEMSERNVRTWNS 195

Query: 282 MISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSG 341
           M +GYT +G  E  ++LF ++L    R +  T+V ++        L L   I+ +  + G
Sbjct: 196 MFAGYTKSGNWEEVVKLFHEMLELDIRFDEVTLVSVLTACGRLADLELGEWINRYVEEKG 255

Query: 342 IVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQ 401
           +  N +++T+L  +Y++  +++ AR+LFD+   + + +W+AMI+GY+Q     EA+ LF 
Sbjct: 256 LKGNPTLITSLVDMYAKCGQVDTARRLFDQMDRRDVVAWSAMISGYSQASRCREALDLFH 315

Query: 402 EMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCG 461
           EMQ + + PN +T+ SILS+CA LGA+  GKWVH  +K +  +  + + TAL+D YAKCG
Sbjct: 316 EMQKANIDPNEITMVSILSSCAVLGALETGKWVHFFIKKKRMKLTVTLGTALMDFYAKCG 375

Query: 462 NIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLY 521
           ++  + E+F  M  K+ ++W  +I G   +G G +AL+ F  ML   + P+ VTF+ VL 
Sbjct: 376 SVESSIEVFGKMPVKNVLSWTVLIQGLASNGQGKKALEYFYLMLEKNVEPNDVTFIGVLS 435

Query: 522 ACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGP 581
           ACSHAGLV EG ++F SM  D G +P  EHY CMVDILGRAG +E+A +FIK + ++P  
Sbjct: 436 ACSHAGLVDEGRDLFVSMSRDFGIEPRIEHYGCMVDILGRAGLIEEAFQFIKNMPIQPNA 495

Query: 582 AVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVV 641
            +W  LL +C +HK+  +   + ++L  L+P + G ++LLSNIY++   +  A  VR  +
Sbjct: 496 VIWRTLLASCKVHKNVEIGEESLKQLIILEPTHSGDYILLSNIYASVGRWEDALKVRGEM 555

Query: 642 KKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTAL 701
           K++ + K PGC+LIE+ G  H F + D +H QS  IY  +E +  +++ AG+   T  A 
Sbjct: 556 KEKGIKKTPGCSLIELDGVIHEFFAEDNVHSQSEEIYNAIEDMMKQIKSAGYVPNTAEAR 615

Query: 702 HDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRV 761
            D EE++KE  +  HSEKLAIAFGLI + PGT IRI KNLRVC DCH ATK +SKV  R 
Sbjct: 616 LDAEEDDKESSVSHHSEKLAIAFGLIKSPPGTTIRITKNLRVCTDCHNATKLVSKVFNRE 675

Query: 762 IVVRDANRFHHFKGGVCSCGDYW 784
           IVVRD  RFHHFK G CSC DYW
Sbjct: 676 IVVRDRTRFHHFKEGSCSCNDYW 698



 Score =  207 bits (526), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 150/522 (28%), Positives = 258/522 (49%), Gaps = 25/522 (4%)

Query: 15  LLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATC------YARALFFSIP 68
           +L+  KT   L + HA +I    +  L    K+A  L +  A        YA ++F  I 
Sbjct: 30  ILEQCKTIRDLNEIHAHLI----KTRLLLKPKVAENLLESAAILLPTSMDYAVSIFRQID 85

Query: 69  KPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGV 128
           +PD   +N++IRGF+  + P  +I  +  + +N+ + PD FT+  +L   S     S G 
Sbjct: 86  EPDSPAYNIMIRGFTLKQSPHEAILLFKEMHENS-VQPDEFTFPCILKVCSRLQALSEGE 144

Query: 129 LLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNC 188
            +H   +  G+GS  FV   L+ +Y     V+ AR+VFD+M E++   WNSM +G  K+ 
Sbjct: 145 QIHALIMKCGFGSHGFVKNTLIHMYANCGEVEVARRVFDEMSERNVRTWNSMFAGYTKSG 204

Query: 189 CFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVL 248
            +++ + +F +M+       D  ++ +VL A   + +L LG  I     + G   +  ++
Sbjct: 205 NWEEVVKLFHEMLE-LDIRFDEVTLVSVLTACGRLADLELGEWINRYVEEKGLKGNPTLI 263

Query: 249 TGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAER 308
           T LV  Y+KCG+V+ A  LF  + R D+++ +AMISGY+   +   +L LF ++  +   
Sbjct: 264 TSLVDMYAKCGQVDTARRLFDQMDRRDVVAWSAMISGYSQASRCREALDLFHEMQKANID 323

Query: 309 VNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKL 368
            N  T+V ++      G L     +H F  K  +    ++ TAL   Y++   +E++ ++
Sbjct: 324 PNEITMVSILSSCAVLGALETGKWVHFFIKKKRMKLTVTLGTALMDFYAKCGSVESSIEV 383

Query: 369 FDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAI 428
           F +   K++ SW  +I G   NG  ++A+  F  M    V PN VT   +LSAC+  G +
Sbjct: 384 FGKMPVKNVLSWTVLIQGLASNGQGKKALEYFYLMLEKNVEPNDVTFIGVLSACSHAGLV 443

Query: 429 SLGKWVHELVKSRNF--ESNIYVSTALIDMYAKCGNIVEARELFDLMS-HKSEVTWNTMI 485
             G+ +  +  SR+F  E  I     ++D+  + G I EA +    M    + V W T++
Sbjct: 444 DEGRDLF-VSMSRDFGIEPRIEHYGCMVDILGRAGLIEEAFQFIKNMPIQPNAVIWRTLL 502

Query: 486 SGYGLHGH---GLEALQ--LFSEMLHSGIRPSGVTFLSVLYA 522
           +   +H +   G E+L+  +  E  HSG        LS +YA
Sbjct: 503 ASCKVHKNVEIGEESLKQLIILEPTHSG----DYILLSNIYA 540


>gi|225428647|ref|XP_002281535.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic [Vitis vinifera]
 gi|297741370|emb|CBI32501.3| unnamed protein product [Vitis vinifera]
          Length = 697

 Score =  512 bits (1318), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 272/706 (38%), Positives = 417/706 (59%), Gaps = 17/706 (2%)

Query: 87  MPKSSICFYTHLRKNTA--LTPDNFTYSFVLSAASACCDRSIGVL-----LHGHAIVSGY 139
           MP  +  FY HL  N    L+P        L+   A   R +  L     +H   I SG 
Sbjct: 1   MPPVNFNFYRHLSSNPTQRLSP--------LAQPHASILRKLKDLKPLQQIHAQIITSGL 52

Query: 140 GSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGD 199
             + F+  +L++ Y     +  A+++F   P K+ V W  +ISGL KN CF ++I VF +
Sbjct: 53  THNTFLSNSLMNAYVYCGLLADAKQIFHHTPYKNVVSWTILISGLAKNDCFVEAIDVFRE 112

Query: 200 MVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCG 259
           M+  G    ++ ++++VLPA A +  +R+   + C  ++ GF  +V+V T LV  YSK G
Sbjct: 113 MIM-GNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGGFEGNVFVETALVDMYSKFG 171

Query: 260 EVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIP 319
            +  A  LF  +   ++++ NA++SGY+ +G +E ++ LF  +      V+  TI+ LIP
Sbjct: 172 CMGVARQLFESMSERNVVTWNAIVSGYSDHGFSEEAIDLFNLMRRKGLLVDFYTIMSLIP 231

Query: 320 VFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLAS 379
                G L +   IH F +++G  ++  + TAL  +Y   N ++ A ++F E S K +A+
Sbjct: 232 ASLSVGCLQVGTGIHGFIIRTGYENDKHIKTALMDIYVSHNCVDDAHRVFSEMSVKDVAA 291

Query: 380 WNAMIAGYTQNGLTEEAISLFQEMQA-SKVAPNPVTVSSILSACAQLGAISLGKWVHELV 438
           W  M+ G++     + AI  F +M     +  + + +  ILS+C+  GA+  G+ VH L 
Sbjct: 292 WTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLDSIALMGILSSCSHSGALQQGRRVHALA 351

Query: 439 KSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEAL 498
               F +NI+V +A+IDMYA CGN+ +A+  F  M  K  V WN MI+G G++G+G +A+
Sbjct: 352 IKTCFANNIFVGSAVIDMYANCGNLEDAKRFFYGMGEKDVVCWNAMIAGNGMNGYGTDAI 411

Query: 499 QLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDI 558
            LF +M  SG+ P   TF+SVLYACSHAG+V EG +IF  M+      P  +HYAC++DI
Sbjct: 412 DLFLQMKGSGLDPDESTFVSVLYACSHAGMVYEGLQIFYHMVKTSHVIPNLQHYACVIDI 471

Query: 559 LGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYH 618
           LGRAGQL+ A  FI  +  +P   V+  LLGAC IH +  L    S+K+FE++P + GY+
Sbjct: 472 LGRAGQLDAAYSFINNMPFQPDFDVYSTLLGACRIHGNIKLGHEISQKIFEMEPNDAGYY 531

Query: 619 VLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIY 678
           VLLSN+Y+   ++      R  ++ +++ K PG + IE+    + F +G++ HPQ   I 
Sbjct: 532 VLLSNMYALAGNWEGVKMTRASLRSKRMKKDPGFSSIEINQEIYTFMAGEKDHPQYFKIE 591

Query: 679 AMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRII 738
            +L+ L  K+++AG+   T   L DV ++ K+ ++  HSEK+AIAFGL+ T+P T IRI 
Sbjct: 592 GILKGLILKIKKAGYVPNTNVLLQDVSDDMKKDILYHHSEKMAIAFGLMRTKPETIIRIT 651

Query: 739 KNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           KNLR C DCHTA+KF+SKV GRV+V++DANRFH F+ GVCSC DYW
Sbjct: 652 KNLRTCDDCHTASKFVSKVFGRVLVIKDANRFHVFQDGVCSCRDYW 697



 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 127/501 (25%), Positives = 249/501 (49%), Gaps = 16/501 (3%)

Query: 14  SLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATC----YARALFFSIPK 69
           S+L+  K    L Q HAQII  G  ++    T L++ L +    C     A+ +F   P 
Sbjct: 29  SILRKLKDLKPLQQIHAQIITSGLTHN----TFLSNSLMNAYVYCGLLADAKQIFHHTPY 84

Query: 70  PDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVL 129
            ++  + ++I G + N+    +I  +  +       P+  T S VL A +      I   
Sbjct: 85  KNVVSWTILISGLAKNDCFVEAIDVFREMIMGN-FKPNAVTISSVLPAFANLGLIRIAKS 143

Query: 130 LHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCC 189
           +H   +  G+  ++FV  ALVD+Y KF  +  AR++F+ M E++ V WN+++SG   +  
Sbjct: 144 VHCFWVRGGFEGNVFVETALVDMYSKFGCMGVARQLFESMSERNVVTWNAIVSGYSDHGF 203

Query: 190 FQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLT 249
            +++I +F +++R  G  +D  ++ +++PA   V  L++G  I    ++ G+ +  ++ T
Sbjct: 204 SEEAIDLF-NLMRRKGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIKT 262

Query: 250 GLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAE-R 308
            L+  Y     V+ A  +F ++   D+ +   M++G++     + +++ F ++L     +
Sbjct: 263 ALMDIYVSHNCVDDAHRVFSEMSVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLK 322

Query: 309 VNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKL 368
           ++S  ++G++      G L     +H+  +K+   +N  V +A+  +Y+    +E A++ 
Sbjct: 323 LDSIALMGILSSCSHSGALQQGRRVHALAIKTCFANNIFVGSAVIDMYANCGNLEDAKRF 382

Query: 369 FDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAI 428
           F    EK +  WNAMIAG   NG   +AI LF +M+ S + P+  T  S+L AC+  G +
Sbjct: 383 FYGMGEKDVVCWNAMIAGNGMNGYGTDAIDLFLQMKGSGLDPDESTFVSVLYACSHAGMV 442

Query: 429 SLGKWV-HELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEV-TWNTMIS 486
             G  + + +VK+ +   N+     +ID+  + G +  A    + M  + +   ++T++ 
Sbjct: 443 YEGLQIFYHMVKTSHVIPNLQHYACVIDILGRAGQLDAAYSFINNMPFQPDFDVYSTLLG 502

Query: 487 GYGLHGH---GLEALQLFSEM 504
              +HG+   G E  Q   EM
Sbjct: 503 ACRIHGNIKLGHEISQKIFEM 523


>gi|359488035|ref|XP_003633690.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g14820-like [Vitis vinifera]
          Length = 731

 Score =  511 bits (1317), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 258/641 (40%), Positives = 384/641 (59%), Gaps = 34/641 (5%)

Query: 177 WNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLG 236
           WN +I+   K    ++++ V+  + R     +D+    +VL A  +V   +LG EI    
Sbjct: 92  WNFVITSYTKRNQPRNALNVYAQL-RKMDFEVDNFMAPSVLKACGQVSWTQLGKEIHGFV 150

Query: 237 LKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSL 296
           LK G    V+V   L+  Y +C  VE A L+F  ++  D++S + MI   + N + + +L
Sbjct: 151 LKKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMERDVVSWSTMIRSLSRNKEFDMAL 210

Query: 297 RLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKS------GIVSNSSVL- 349
            L R++     R +   +V ++ +F    ++ +   +H++ +++      G+ + +++L 
Sbjct: 211 ELIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMHAYVIRNSNNEHMGVPTTTALLD 270

Query: 350 --------------------------TALSTVYSRLNEMEAARKLFDESSEKSLASWNAM 383
                                     TA+     R N +E AR LFD +  + +  W AM
Sbjct: 271 MYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEARALFDSTQNRDVMIWTAM 330

Query: 384 IAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNF 443
           ++ Y Q    ++A +LF +M+ S V P  VT+ S+LS CA  GA+ LGKWVH  +     
Sbjct: 331 LSAYAQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERV 390

Query: 444 ESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSE 503
           E +  ++TAL+DMYAKCG+I  A  LF     +    WN +I+G+ +HG+G EAL +F+E
Sbjct: 391 EVDCILNTALVDMYAKCGDINAAGRLFIEAISRDICMWNAIITGFAMHGYGEEALDIFAE 450

Query: 504 MLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAG 563
           M   G++P+ +TF+ +L+ACSHAGLV EG ++F+ M+H  G  P  EHY CMVD+LGRAG
Sbjct: 451 MERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTFGLVPQIEHYGCMVDLLGRAG 510

Query: 564 QLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSN 623
            L++A E IK + ++P   VWGAL+ AC +HK+  L  +A+ +L E++PEN GY+VL+SN
Sbjct: 511 LLDEAHEMIKSMPIKPNTIVWGALVAACRLHKNPQLGELAATQLLEIEPENCGYNVLMSN 570

Query: 624 IYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEK 683
           IY+A   +  AA VR+ +K   + K PG ++IEV GT H F  GDQ HPQ   I  ML +
Sbjct: 571 IYAAANRWSDAAGVRKTMKTVGMKKEPGHSVIEVNGTVHEFLMGDQSHPQIRRINEMLAE 630

Query: 684 LNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRV 743
           +  K+ EAG+  +T T L +++EEEKE  +  HSEKLA+AFGLI+T P T IRI+KNLRV
Sbjct: 631 MRRKLNEAGYVPDTSTVLLNIDEEEKETALTYHSEKLAMAFGLISTAPSTPIRIVKNLRV 690

Query: 744 CLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           C DCH ATK +SK+ GRVI+VRD NRFHHF+ G CSCGDYW
Sbjct: 691 CNDCHAATKLLSKIYGRVIIVRDRNRFHHFREGYCSCGDYW 731



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 136/510 (26%), Positives = 230/510 (45%), Gaps = 62/510 (12%)

Query: 21  TQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIR 80
           T  Q  Q HA II   F + L         L+DF +     A +           N +I 
Sbjct: 55  TLEQTKQIHAHIIKTHFHHALQI------PLNDFPSGLSPSAQW-----------NFVIT 97

Query: 81  GFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYG 140
            ++    P++++  Y  LRK      DNF    VL A        +G  +HG  +  G  
Sbjct: 98  SYTKRNQPRNALNVYAQLRK-MDFEVDNFMAPSVLKACGQVSWTQLGKEIHGFVLKKGLD 156

Query: 141 SDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDM 200
            D+FVG AL+ +Y + + V+ AR VFDKM E+D V W++MI  L +N  F  ++ +  +M
Sbjct: 157 RDVFVGNALMLMYGECACVEYARLVFDKMMERDVVSWSTMIRSLSRNKEFDMALELIREM 216

Query: 201 ----VRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYV--LTGLVSF 254
               VR         ++ +++   A+   +R+G  +    ++   ++H+ V   T L+  
Sbjct: 217 NFMQVRPS-----EVAMVSMVNLFADTANMRMGKAMHAYVIRNSNNEHMGVPTTTALLDM 271

Query: 255 YSKCGEVERAELLFRDIVRPDLISCNAMISG----------------------------- 285
           Y+KCG +  A  LF  + +  ++S  AMI+G                             
Sbjct: 272 YAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEARALFDSTQNRDVMIWTAML 331

Query: 286 --YTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIV 343
             Y      + +  LF Q+  S  R    TIV L+ +    G L L   +HS+  K  + 
Sbjct: 332 SAYAQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVE 391

Query: 344 SNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEM 403
            +  + TAL  +Y++  ++ AA +LF E+  + +  WNA+I G+  +G  EEA+ +F EM
Sbjct: 392 VDCILNTALVDMYAKCGDINAAGRLFIEAISRDICMWNAIITGFAMHGYGEEALDIFAEM 451

Query: 404 QASKVAPNPVTVSSILSACAQLGAISLGKWVHE-LVKSRNFESNIYVSTALIDMYAKCGN 462
           +   V PN +T   +L AC+  G ++ GK + E +V +      I     ++D+  + G 
Sbjct: 452 ERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTFGLVPQIEHYGCMVDLLGRAGL 511

Query: 463 IVEARELFDLMSHK-SEVTWNTMISGYGLH 491
           + EA E+   M  K + + W  +++   LH
Sbjct: 512 LDEAHEMIKSMPIKPNTIVWGALVAACRLH 541



 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 55/216 (25%), Positives = 102/216 (47%), Gaps = 2/216 (0%)

Query: 378 ASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHEL 437
           A WN +I  YT+      A++++ +++      +     S+L AC Q+    LGK +H  
Sbjct: 90  AQWNFVITSYTKRNQPRNALNVYAQLRKMDFEVDNFMAPSVLKACGQVSWTQLGKEIHGF 149

Query: 438 VKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEA 497
           V  +  + +++V  AL+ MY +C  +  AR +FD M  +  V+W+TMI     +     A
Sbjct: 150 VLKKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMERDVVSWSTMIRSLSRNKEFDMA 209

Query: 498 LQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLA-EHYACMV 556
           L+L  EM    +RPS V  +S++   +    +R G  +   +I +   + +       ++
Sbjct: 210 LELIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMHAYVIRNSNNEHMGVPTTTALL 269

Query: 557 DILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACM 592
           D+  + G L  A +   GL  +     W A++  C+
Sbjct: 270 DMYAKCGHLGLARQLFNGL-TQKTVVSWTAMIAGCI 304


>gi|328774763|gb|AEB39781.1| pentatricopeptide repeat protein 79 [Funaria hygrometrica]
          Length = 820

 Score =  511 bits (1316), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 282/759 (37%), Positives = 428/759 (56%), Gaps = 4/759 (0%)

Query: 27  QTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNE 86
           Q H  I+  G + ++  +  L        +   AR LF       +  +NV+I G+++  
Sbjct: 65  QVHEHILRFGMKPNVYIINTLLKLYVHCGSVNEARRLFDKFSNKSVVSWNVMISGYAHRG 124

Query: 87  MPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVG 146
           + + +   +T L +   L PD FT+  +LSA S+    + G  +H   + +G  ++  VG
Sbjct: 125 LGQEAFNLFT-LMQQEGLEPDKFTFVSILSACSSPAALNWGREVHVRVMEAGLANNATVG 183

Query: 147 AALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGT 206
            AL+ +Y K   V+ AR+VFD M  +D V W ++     ++   Q+S+  +  M++ G  
Sbjct: 184 NALISMYAKCGSVRDARRVFDAMASRDEVSWTTLTGAYAESGYAQESLKTYHAMLQEG-V 242

Query: 207 WLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAEL 266
                +   VL A   +  L  G +I    ++   H  V V T L   Y KCG V+ A  
Sbjct: 243 RPSRITYMNVLSACGSLAALEKGKQIHAQIVESEHHSDVRVSTALTKMYIKCGAVKDARE 302

Query: 267 LFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGH 326
           +F  +   D+I+ N MI G   +G+ E +  +F ++L      +  T + ++      G 
Sbjct: 303 VFECLPNRDVIAWNTMIGGLVDSGQLEEAHGMFHRMLKECVAPDRVTYLAILSACARPGG 362

Query: 327 LHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAG 386
           L     IH+  +K G+VS+     AL  +YS+   M+ AR++FD   ++ + SW A++ G
Sbjct: 363 LACGKEIHARAVKDGLVSDVRFGNALINMYSKAGSMKDARQVFDRMPKRDVVSWTALVGG 422

Query: 387 YTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVH-ELVKSRNFES 445
           Y   G   E+ S F++M    V  N +T   +L AC+   A+  GK +H E+VK+  F +
Sbjct: 423 YADCGQVVESFSTFKKMLQQGVEANKITYMCVLKACSNPVALKWGKEIHAEVVKAGIF-A 481

Query: 446 NIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEML 505
           ++ V+ AL+ MY KCG++ +A  + + MS +  VTWNT+I G   +G GLEALQ F  M 
Sbjct: 482 DLAVANALMSMYFKCGSVEDAIRVSEGMSTRDVVTWNTLIGGLAQNGRGLEALQKFEVMK 541

Query: 506 HSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQL 565
              +RP+  TF++V+ AC    LV EG   F SM  D+G  P  +HYACMVDIL RAG L
Sbjct: 542 SEEMRPNATTFVNVMSACRVRNLVEEGRRQFASMRKDYGIVPTEKHYACMVDILARAGHL 601

Query: 566 EKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIY 625
            +A + I  +  +P  A+WGALL AC  H +  +   A+E+  +L+P+N G +V LS IY
Sbjct: 602 GEAEDVILTMPFKPSAAMWGALLAACRAHGNVEIGEQAAEQCLKLEPQNAGTYVSLSFIY 661

Query: 626 SAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLN 685
           +A   +   A +R+++K+R + K PG + IEV G  H F +GDQ HP++  IY+ LE L 
Sbjct: 662 AAAGMWRDVAKLRKLMKERGVKKEPGRSWIEVAGEVHSFVAGDQSHPRTEEIYSELEALT 721

Query: 686 GKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCL 745
            +++  G+  +T   +HD+++E KE  +  HSEKLAIA+GLI+T P T IR+ KNLRVC 
Sbjct: 722 KQIKSLGYVPDTRFVMHDLDQEGKERAVCHHSEKLAIAYGLISTPPETPIRVSKNLRVCT 781

Query: 746 DCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           DCHTATKFISK+TGR I+ RDA+RFHHFK G CSCGDYW
Sbjct: 782 DCHTATKFISKITGREIIARDAHRFHHFKNGECSCGDYW 820



 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 137/483 (28%), Positives = 239/483 (49%), Gaps = 3/483 (0%)

Query: 107 DNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVF 166
           D++ Y  +L +     D ++G  +H H +  G   ++++   L+ LY     V  AR++F
Sbjct: 43  DSYDYVKLLQSCVKAKDLAVGKQVHEHILRFGMKPNVYIINTLLKLYVHCGSVNEARRLF 102

Query: 167 DKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQEL 226
           DK   K  V WN MISG       Q++  +F  +++  G   D  +  ++L A +    L
Sbjct: 103 DKFSNKSVVSWNVMISGYAHRGLGQEAFNLF-TLMQQEGLEPDKFTFVSILSACSSPAAL 161

Query: 227 RLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGY 286
             G E+    ++ G  ++  V   L+S Y+KCG V  A  +F  +   D +S   +   Y
Sbjct: 162 NWGREVHVRVMEAGLANNATVGNALISMYAKCGSVRDARRVFDAMASRDEVSWTTLTGAY 221

Query: 287 TCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNS 346
             +G  + SL+ +  +L    R +  T + ++        L     IH+  ++S   S+ 
Sbjct: 222 AESGYAQESLKTYHAMLQEGVRPSRITYMNVLSACGSLAALEKGKQIHAQIVESEHHSDV 281

Query: 347 SVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQAS 406
            V TAL+ +Y +   ++ AR++F+    + + +WN MI G   +G  EEA  +F  M   
Sbjct: 282 RVSTALTKMYIKCGAVKDAREVFECLPNRDVIAWNTMIGGLVDSGQLEEAHGMFHRMLKE 341

Query: 407 KVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEA 466
            VAP+ VT  +ILSACA+ G ++ GK +H         S++    ALI+MY+K G++ +A
Sbjct: 342 CVAPDRVTYLAILSACARPGGLACGKEIHARAVKDGLVSDVRFGNALINMYSKAGSMKDA 401

Query: 467 RELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHA 526
           R++FD M  +  V+W  ++ GY   G  +E+   F +ML  G+  + +T++ VL ACS+ 
Sbjct: 402 RQVFDRMPKRDVVSWTALVGGYADCGQVVESFSTFKKMLQQGVEANKITYMCVLKACSNP 461

Query: 527 GLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGA 586
             ++ G EI   ++    F  LA   A M  +  + G +E A+   +G++       W  
Sbjct: 462 VALKWGKEIHAEVVKAGIFADLAVANALM-SMYFKCGSVEDAIRVSEGMSTRD-VVTWNT 519

Query: 587 LLG 589
           L+G
Sbjct: 520 LIG 522



 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 109/387 (28%), Positives = 192/387 (49%), Gaps = 6/387 (1%)

Query: 205 GTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERA 264
           G+ +DS     +L +  + ++L +G ++    L+ G   +VY++  L+  Y  CG V  A
Sbjct: 39  GSQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRFGMKPNVYIINTLLKLYVHCGSVNEA 98

Query: 265 ELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPF 324
             LF       ++S N MISGY   G  + +  LF  +       +  T V ++      
Sbjct: 99  RRLFDKFSNKSVVSWNVMISGYAHRGLGQEAFNLFTLMQQEGLEPDKFTFVSILSACSSP 158

Query: 325 GHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMI 384
             L+    +H   +++G+ +N++V  AL ++Y++   +  AR++FD  + +   SW  + 
Sbjct: 159 AALNWGREVHVRVMEAGLANNATVGNALISMYAKCGSVRDARRVFDAMASRDEVSWTTLT 218

Query: 385 AGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFE 444
             Y ++G  +E++  +  M    V P+ +T  ++LSAC  L A+  GK +H  +      
Sbjct: 219 GAYAESGYAQESLKTYHAMLQEGVRPSRITYMNVLSACGSLAALEKGKQIHAQIVESEHH 278

Query: 445 SNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEM 504
           S++ VSTAL  MY KCG + +ARE+F+ + ++  + WNTMI G    G   EA  +F  M
Sbjct: 279 SDVRVSTALTKMYIKCGAVKDAREVFECLPNRDVIAWNTMIGGLVDSGQLEEAHGMFHRM 338

Query: 505 LHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQ 564
           L   + P  VT+L++L AC+  G +  G EI    + D G          ++++  +AG 
Sbjct: 339 LKECVAPDRVTYLAILSACARPGGLACGKEIHARAVKD-GLVSDVRFGNALINMYSKAGS 397

Query: 565 LEKALEFIKGLAVEPGPAV--WGALLG 589
           ++ A +    +   P   V  W AL+G
Sbjct: 398 MKDARQVFDRM---PKRDVVSWTALVG 421



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 85/243 (34%), Positives = 133/243 (54%)

Query: 298 LFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYS 357
           + + L     +V+S   V L+        L +   +H   L+ G+  N  ++  L  +Y 
Sbjct: 31  VLQYLHQKGSQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRFGMKPNVYIINTLLKLYV 90

Query: 358 RLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSS 417
               +  AR+LFD+ S KS+ SWN MI+GY   GL +EA +LF  MQ   + P+  T  S
Sbjct: 91  HCGSVNEARRLFDKFSNKSVVSWNVMISGYAHRGLGQEAFNLFTLMQQEGLEPDKFTFVS 150

Query: 418 ILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKS 477
           ILSAC+   A++ G+ VH  V      +N  V  ALI MYAKCG++ +AR +FD M+ + 
Sbjct: 151 ILSACSSPAALNWGREVHVRVMEAGLANNATVGNALISMYAKCGSVRDARRVFDAMASRD 210

Query: 478 EVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQ 537
           EV+W T+   Y   G+  E+L+ +  ML  G+RPS +T+++VL AC     + +G +I  
Sbjct: 211 EVSWTTLTGAYAESGYAQESLKTYHAMLQEGVRPSRITYMNVLSACGSLAALEKGKQIHA 270

Query: 538 SMI 540
            ++
Sbjct: 271 QIV 273


>gi|449485624|ref|XP_004157227.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g57430, chloroplastic-like [Cucumis sativus]
          Length = 863

 Score =  511 bits (1315), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 281/724 (38%), Positives = 424/724 (58%), Gaps = 13/724 (1%)

Query: 69  KPDLFLFNVIIRGFS---NNEMPKS--SICFYTHLRKNTALTPDNFTYSFVLSAASACCD 123
           K + F F+ +++G S   N E+ K    +   T +  +T ++P+ F+ S VL+A +   D
Sbjct: 145 KGNEFTFSSVLKGCSLTRNLELGKQIHRVALVTEM-ISTGISPNEFSLSTVLNACAGLED 203

Query: 124 RSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISG 183
            + G+ +HG+ I  GY SD F   AL+D+Y K    ++A  VF ++P+ D V WN++I+G
Sbjct: 204 ENYGMKVHGYLIKLGYDSDPFSANALLDMYAKSGCPEAAIAVFYEIPKPDIVSWNAVIAG 263

Query: 184 LMKNCCFQDSIWVFGDMVRNGGTWLDSTS---VAAVLPAVAEVQELRLGMEIQCLGLKLG 240
            + +     ++ + G M    G++  + S   +++ L A A +  ++LG ++    +K+ 
Sbjct: 264 CVLHEKNDLALKLLGKM----GSYRVAPSMFTLSSALKACAAIGLVKLGRQLHSALMKMD 319

Query: 241 FHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFR 300
                +V  GL+  YSKCG ++ A ++F  +   D+I  N++ISGY+  G    ++ LF 
Sbjct: 320 MEPDSFVGVGLIDMYSKCGLLQDARMVFDLMPXKDVIVWNSIISGYSNCGYDIEAMSLFT 379

Query: 301 QLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLN 360
            +       N +T+  ++              +H+  +KSG   +  V  +L   Y +  
Sbjct: 380 NMYKEGLEFNQTTLSTILKSTAGSQANGFCEQVHTISIKSGYQYDGYVANSLLDSYGKCC 439

Query: 361 EMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILS 420
            +E A K+F+    + L ++ +MI  Y+Q GL EEA+ ++  MQ   + P+    SS+ +
Sbjct: 440 LLEDAAKVFEVCPAEDLVAYTSMITAYSQYGLGEEALKMYLRMQDRDIKPDAFIFSSLFN 499

Query: 421 ACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVT 480
           ACA L A   GK +H  V      S+++   +L++MYAKCG+I +A  +F+ +S +  V+
Sbjct: 500 ACANLSAYEQGKQIHVHVLKCGLLSDVFAGNSLVNMYAKCGSIDDASCIFNEISWRGIVS 559

Query: 481 WNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMI 540
           W+ MI G   HGHG +ALQLF +ML +GI P+ +T +SVL AC+HAGLV E    F  M 
Sbjct: 560 WSAMIGGLAQHGHGRKALQLFYQMLKNGILPNHITLVSVLSACNHAGLVTEARRFFGLME 619

Query: 541 HDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLA 600
              G  P  EHYACMVDILGR G+L++A+  +K +  +   AVWGALLGA  IHK+  L 
Sbjct: 620 KLFGITPTQEHYACMVDILGRVGRLDEAMVLVKEMPFQASAAVWGALLGAARIHKNIELG 679

Query: 601 RVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGT 660
           R A+E L  L+PE  G H+LL+NIY++   +   A VR+ +K   + K PG + IE+   
Sbjct: 680 RHAAEMLLTLEPEKSGTHILLANIYASTGMWDNVAKVRRSMKNSLVKKEPGMSWIELKDK 739

Query: 661 PHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKL 720
            + F  GD+ HP+S  IY  L+ L  ++  AG+     T LHDVE+ EKE ++  HSEKL
Sbjct: 740 VYTFIVGDRSHPRSKEIYVKLDDLRERLTSAGYVPMIETDLHDVEQIEKEQLLWHHSEKL 799

Query: 721 AIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSC 780
           A+AFGLIAT PG  IR+ KNLRVC+DCHTA KFISKV  R I+VRD NRFHHF+ G CSC
Sbjct: 800 AVAFGLIATPPGAPIRVKKNLRVCIDCHTAFKFISKVASREIIVRDINRFHHFRDGSCSC 859

Query: 781 GDYW 784
           GDYW
Sbjct: 860 GDYW 863



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 125/482 (25%), Positives = 228/482 (47%), Gaps = 6/482 (1%)

Query: 13  LSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDL 72
           L+   G + ++   + H  +I  G+ +D  +   L    +       A A+F+ IPKPD+
Sbjct: 195 LNACAGLEDENYGMKVHGYLIKLGYDSDPFSANALLDMYAKSGCPEAAIAVFYEIPKPDI 254

Query: 73  FLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHG 132
             +N +I G   +E    ++     +  +  + P  FT S  L A +A     +G  LH 
Sbjct: 255 VSWNAVIAGCVLHEKNDLALKLLGKM-GSYRVAPSMFTLSSALKACAAIGLVKLGRQLHS 313

Query: 133 HAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQ- 191
             +      D FVG  L+D+Y K   ++ AR VFD MP KD ++WNS+ISG   NC +  
Sbjct: 314 ALMKMDMEPDSFVGVGLIDMYSKCGLLQDARMVFDLMPXKDVIVWNSIISGY-SNCGYDI 372

Query: 192 DSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGL 251
           +++ +F +M + G  + + T+++ +L + A  Q      ++  + +K G+    YV   L
Sbjct: 373 EAMSLFTNMYKEGLEF-NQTTLSTILKSTAGSQANGFCEQVHTISIKSGYQYDGYVANSL 431

Query: 252 VSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNS 311
           +  Y KC  +E A  +F      DL++  +MI+ Y+  G  E +L+++ ++     + ++
Sbjct: 432 LDSYGKCCLLEDAAKVFEVCPAEDLVAYTSMITAYSQYGLGEEALKMYLRMQDRDIKPDA 491

Query: 312 STIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDE 371
                L               IH   LK G++S+     +L  +Y++   ++ A  +F+E
Sbjct: 492 FIFSSLFNACANLSAYEQGKQIHVHVLKCGLLSDVFAGNSLVNMYAKCGSIDDASCIFNE 551

Query: 372 SSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLG 431
            S + + SW+AMI G  Q+G   +A+ LF +M  + + PN +T+ S+LSAC   G ++  
Sbjct: 552 ISWRGIVSWSAMIGGLAQHGHGRKALQLFYQMLKNGILPNHITLVSVLSACNHAGLVTEA 611

Query: 432 KWVHELV-KSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHK-SEVTWNTMISGYG 489
           +    L+ K             ++D+  + G + EA  L   M  + S   W  ++    
Sbjct: 612 RRFFGLMEKLFGITPTQEHYACMVDILGRVGRLDEAMVLVKEMPFQASAAVWGALLGAAR 671

Query: 490 LH 491
           +H
Sbjct: 672 IH 673



 Score =  162 bits (409), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 145/578 (25%), Positives = 264/578 (45%), Gaps = 64/578 (11%)

Query: 70  PDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTA--------LTPDNFTYSFVLSAASAC 121
           P L     ++R      +  +S+ + ++LR N            P + +Y  +L   +A 
Sbjct: 4   PHLHSLRTVLRKPLKPFIVNTSVKYISNLRPNDVSGFILDSSSNPSSISYPKLLLQFTAS 63

Query: 122 CDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMI 181
            D S G+ +H   I       L +   LV+LY K    + ARK+     E D V W+++I
Sbjct: 64  KDVSSGMAIHARIIRL---GLLGLRNRLVNLYSKCQCFRVARKLVIDSSEPDLVSWSALI 120

Query: 182 SGLMKNCCFQDSIWVFGDM---------------------VRN----------------- 203
           SG ++N   ++++  + +M                      RN                 
Sbjct: 121 SGYVQNGRGEEALLTYYEMYLLGAKGNEFTFSSVLKGCSLTRNLELGKQIHRVALVTEMI 180

Query: 204 -GGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVE 262
             G   +  S++ VL A A +++   GM++    +KLG+    +    L+  Y+K G  E
Sbjct: 181 STGISPNEFSLSTVLNACAGLEDENYGMKVHGYLIKLGYDSDPFSANALLDMYAKSGCPE 240

Query: 263 RAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSS--TIVGLIPV 320
            A  +F +I +PD++S NA+I+G   + K + +L+L  ++   + RV  S  T+   +  
Sbjct: 241 AAIAVFYEIPKPDIVSWNAVIAGCVLHEKNDLALKLLGKM--GSYRVAPSMFTLSSALKA 298

Query: 321 FYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASW 380
               G + L   +HS  +K  +  +S V   L  +YS+   ++ AR +FD    K +  W
Sbjct: 299 CAAIGLVKLGRQLHSALMKMDMEPDSFVGVGLIDMYSKCGLLQDARMVFDLMPXKDVIVW 358

Query: 381 NAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKS 440
           N++I+GY+  G   EA+SLF  M    +  N  T+S+IL + A   A    + VH +   
Sbjct: 359 NSIISGYSNCGYDIEAMSLFTNMYKEGLEFNQTTLSTILKSTAGSQANGFCEQVHTISIK 418

Query: 441 RNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQL 500
             ++ + YV+ +L+D Y KC  + +A ++F++   +  V + +MI+ Y  +G G EAL++
Sbjct: 419 SGYQYDGYVANSLLDSYGKCCLLEDAAKVFEVCPAEDLVAYTSMITAYSQYGLGEEALKM 478

Query: 501 FSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFK--PLAEHYA--CMV 556
           +  M    I+P    F S+  AC++     +G +     IH H  K   L++ +A   +V
Sbjct: 479 YLRMQDRDIKPDAFIFSSLFNACANLSAYEQGKQ-----IHVHVLKCGLLSDVFAGNSLV 533

Query: 557 DILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIH 594
           ++  + G ++ A      ++   G   W A++G    H
Sbjct: 534 NMYAKCGSIDDASCIFNEISWR-GIVSWSAMIGGLAQH 570



 Score = 52.4 bits (124), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 46/186 (24%), Positives = 76/186 (40%), Gaps = 40/186 (21%)

Query: 454 IDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSG 513
           +++Y+KC     AR+L    S    V+W+ +ISGY  +G G EAL  + EM   G + + 
Sbjct: 89  VNLYSKCQCFRVARKLVIDSSEPDLVSWSALISGYVQNGRGEEALLTYYEMYLLGAKGNE 148

Query: 514 VTFLSVLYACS------------HAGLVRE-----------------------GDEIFQS 538
            TF SVL  CS               LV E                        DE +  
Sbjct: 149 FTFSSVLKGCSLTRNLELGKQIHRVALVTEMISTGISPNEFSLSTVLNACAGLEDENYGM 208

Query: 539 MIHDH----GFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIH 594
            +H +    G+         ++D+  ++G  E A+     +  +P    W A++  C++H
Sbjct: 209 KVHGYLIKLGYDSDPFSANALLDMYAKSGCPEAAIAVFYEIP-KPDIVSWNAVIAGCVLH 267

Query: 595 KDTNLA 600
           +  +LA
Sbjct: 268 EKNDLA 273


>gi|297822535|ref|XP_002879150.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297324989|gb|EFH55409.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 872

 Score =  510 bits (1314), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 286/767 (37%), Positives = 435/767 (56%), Gaps = 21/767 (2%)

Query: 27  QTHAQIIIHGFQNDLSTVTKLAH---RLSDFKATCYARALFFSIPKPDLFLFNVIIRGFS 83
           Q H Q I  GF +D+S  T L     + S+FK     R +F  + + ++  +  +I G++
Sbjct: 118 QLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKD---GRNVFDEMKERNVVTWTTLISGYA 174

Query: 84  NNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDL 143
            N + +  +  +  + ++    P++FT++  L   +       G+ +H   + +G    +
Sbjct: 175 RNSLNEEVLTLFMRM-QDEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTI 233

Query: 144 FVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRN 203
            V  +L++LY K   V+ AR +FDK   K  V WNSMISG   N    +++ +F  M R 
Sbjct: 234 PVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSM-RL 292

Query: 204 GGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVER 263
               L  +S A+++   A ++ELR   ++ C  +K GF     + T L+  YSKC  +  
Sbjct: 293 NHVRLSESSFASIIKLCANLKELRFTEQLHCSVVKYGFVFDQNIRTALMVAYSKCMAMLD 352

Query: 264 AELLFRDI-VRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNS---STIVGLIP 319
           A  LF++     +++S  AMISG+  N   E ++ LF ++     R N    S I+  +P
Sbjct: 353 ALRLFKETGFLGNVVSWTAMISGFLQNDGKEEAVGLFSEMKRKGVRPNEFTYSVILTALP 412

Query: 320 VFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLAS 379
           V  P       + +H+  +K+    +S+V TAL   Y +L +++ A K+F     K + +
Sbjct: 413 VISP-------SEVHAQVVKTNYERSSTVGTALLDAYVKLGKVDEAAKVFSGIDNKDIVA 465

Query: 380 WNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGA-ISLGKWVHELV 438
           W+AM+AGY Q G TE AI +F E+    V PN  T SSIL+ CA   A +  GK  H   
Sbjct: 466 WSAMLAGYAQAGETEAAIKIFSELTKGGVKPNEFTFSSILNVCAATTASMGQGKQFHGFA 525

Query: 439 KSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEAL 498
                +S++ VS+AL+ MYAK G+I  A E+F     K  V+WN+MISGY  HG  ++AL
Sbjct: 526 IKSRLDSSLCVSSALLTMYAKKGHIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKAL 585

Query: 499 QLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDI 558
            +F EM    ++   VTF+ V  AC+HAGLV EG++ F  M+ D    P  EH +CMVD+
Sbjct: 586 DVFKEMKKRKVKMDSVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDL 645

Query: 559 LGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYH 618
             RAGQLEKA++ I  +    G  +W  +L AC +HK T L R+A+EK+  + PE+   +
Sbjct: 646 YSRAGQLEKAMKVIDNMPNLAGSTIWRTILAACRVHKKTELGRLAAEKIIAMIPEDSAAY 705

Query: 619 VLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIY 678
           VLLSN+Y+   D+ + A VR+++ +R + K PG + IEV    + F +GD+ HP    IY
Sbjct: 706 VLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYAFLAGDRSHPLKDQIY 765

Query: 679 AMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRII 738
             LE L+ ++++ G++ +T   L D+++E KE ++  HSE+LAIAFGLIAT  G+ + II
Sbjct: 766 MKLEDLSTRLKDLGYEPDTSYVLQDIDDEHKEAVLAQHSERLAIAFGLIATPKGSPLLII 825

Query: 739 KNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKG-GVCSCGDYW 784
           KNLRVC DCH   K I+K+  R IVVRD+NRFHHF   GVCSCGD+W
Sbjct: 826 KNLRVCGDCHVVIKLIAKIEEREIVVRDSNRFHHFSSDGVCSCGDFW 872



 Score =  162 bits (410), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 106/362 (29%), Positives = 184/362 (50%), Gaps = 2/362 (0%)

Query: 162 ARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVA 221
           A  +FDK P++D   + S++ G  ++   Q++  +F + +++ G  +D +  ++VL   A
Sbjct: 50  AHNLFDKSPDRDRESYTSLLFGFSRDGRTQEATRLFLN-IQHLGMEMDCSIFSSVLKVSA 108

Query: 222 EVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNA 281
            + +   G ++ C  +K GF D V V T LV  Y K    +    +F ++   ++++   
Sbjct: 109 TLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRNVFDEMKERNVVTWTT 168

Query: 282 MISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSG 341
           +ISGY  N   E  L LF ++     + NS T    + V    G       +H+  +K+G
Sbjct: 169 LISGYARNSLNEEVLTLFMRMQDEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNG 228

Query: 342 IVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQ 401
           +     V  +L  +Y +   +  AR LFD++  KS+ +WN+MI+GY  NGL  EA+ +F 
Sbjct: 229 LDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFY 288

Query: 402 EMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCG 461
            M+ + V  +  + +SI+  CA L  +   + +H  V    F  +  + TAL+  Y+KC 
Sbjct: 289 SMRLNHVRLSESSFASIIKLCANLKELRFTEQLHCSVVKYGFVFDQNIRTALMVAYSKCM 348

Query: 462 NIVEARELFDLMSHKSE-VTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVL 520
            +++A  LF         V+W  MISG+  +    EA+ LFSEM   G+RP+  T+  +L
Sbjct: 349 AMLDALRLFKETGFLGNVVSWTAMISGFLQNDGKEEAVGLFSEMKRKGVRPNEFTYSVIL 408

Query: 521 YA 522
            A
Sbjct: 409 TA 410



 Score = 96.7 bits (239), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 57/204 (27%), Positives = 102/204 (50%), Gaps = 1/204 (0%)

Query: 365 ARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQ 424
           A  LFD+S ++   S+ +++ G++++G T+EA  LF  +Q   +  +    SS+L   A 
Sbjct: 50  AHNLFDKSPDRDRESYTSLLFGFSRDGRTQEATRLFLNIQHLGMEMDCSIFSSVLKVSAT 109

Query: 425 LGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTM 484
           L     G+ +H       F  ++ V T+L+D Y K  N  + R +FD M  ++ VTW T+
Sbjct: 110 LCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRNVFDEMKERNVVTWTTL 169

Query: 485 ISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHG 544
           ISGY  +    E L LF  M   G +P+  TF + L   +  G+   G ++  +++  +G
Sbjct: 170 ISGYARNSLNEEVLTLFMRMQDEGTQPNSFTFAAALGVLAEEGVGGRGLQV-HTVVVKNG 228

Query: 545 FKPLAEHYACMVDILGRAGQLEKA 568
                     ++++  + G + KA
Sbjct: 229 LDKTIPVSNSLINLYLKCGNVRKA 252


>gi|62320406|dbj|BAD94843.1| putative protein [Arabidopsis thaliana]
          Length = 720

 Score =  510 bits (1313), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 269/706 (38%), Positives = 415/706 (58%), Gaps = 8/706 (1%)

Query: 85  NEMPKS-----SICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGY 139
           NE+ KS     SI  +  +  ++ +  D++T+S V  + S+      G  LHG  + SG+
Sbjct: 17  NELAKSGDFSGSIGLFKKM-MSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGF 75

Query: 140 GSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGD 199
           G    VG +LV  Y K   V SARKVFD+M E+D + WNS+I+G + N   +  + VF  
Sbjct: 76  GERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQ 135

Query: 200 MVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCG 259
           M+ +G   +D  ++ +V    A+ + + LG  +  +G+K  F         L+  YSKCG
Sbjct: 136 MLVSG-IEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCG 194

Query: 260 EVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIP 319
           +++ A+ +FR++    ++S  +MI+GY   G    +++LF ++       +  T+  ++ 
Sbjct: 195 DLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLN 254

Query: 320 VFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLAS 379
               +  L     +H +  ++ +  +  V  AL  +Y++   M+ A  +F E   K + S
Sbjct: 255 CCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIIS 314

Query: 380 WNAMIAGYTQNGLTEEAISLFQEM-QASKVAPNPVTVSSILSACAQLGAISLGKWVHELV 438
           WN +I GY++N    EA+SLF  + +  + +P+  TV+ +L ACA L A   G+ +H  +
Sbjct: 315 WNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYI 374

Query: 439 KSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEAL 498
               + S+ +V+ +L+DMYAKCG ++ A  LFD ++ K  V+W  MI+GYG+HG G EA+
Sbjct: 375 MRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAI 434

Query: 499 QLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDI 558
            LF++M  +GI    ++F+S+LYACSH+GLV EG   F  M H+   +P  EHYAC+VD+
Sbjct: 435 ALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDM 494

Query: 559 LGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYH 618
           L R G L KA  FI+ + + P   +WGALL  C IH D  LA   +EK+FEL+PEN GY+
Sbjct: 495 LARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYY 554

Query: 619 VLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIY 678
           VL++NIY+    + Q   +R+ + +R L K PGC+ IE+ G  ++F +GD  +P++  I 
Sbjct: 555 VLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETENIE 614

Query: 679 AMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRII 738
           A L K+  +M E G+   T  AL D EE EKE  +  HSEKLA+A G+I++  G  IR+ 
Sbjct: 615 AFLRKVRARMIEEGYSPLTKYALIDAEEMEKEEALCGHSEKLAMALGIISSGHGKIIRVT 674

Query: 739 KNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           KNLRVC DCH   KF+SK+T R IV+RD+NRFH FK G CSC  +W
Sbjct: 675 KNLRVCGDCHEMAKFMSKLTRREIVLRDSNRFHQFKDGHCSCRGFW 720



 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 130/402 (32%), Positives = 220/402 (54%), Gaps = 5/402 (1%)

Query: 166 FDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQE 225
           FD++  +  + WN +++ L K+  F  SI +F  M+ + G  +DS + + V  + + ++ 
Sbjct: 1   FDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMM-SSGVEMDSYTFSCVSKSFSSLRS 59

Query: 226 LRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISG 285
           +  G ++    LK GF +   V   LV+FY K   V+ A  +F ++   D+IS N++I+G
Sbjct: 60  VHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIING 119

Query: 286 YTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSN 345
           Y  NG  E  L +F Q+L S   ++ +TIV +         + L   +HS  +K+     
Sbjct: 120 YVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSRE 179

Query: 346 SSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQA 405
                 L  +YS+  ++++A+ +F E S++S+ S+ +MIAGY + GL  EA+ LF+EM+ 
Sbjct: 180 DRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEE 239

Query: 406 SKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVE 465
             ++P+  TV+++L+ CA+   +  GK VHE +K  +   +I+VS AL+DMYAKCG++ E
Sbjct: 240 EGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQE 299

Query: 466 ARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSG-IRPSGVTFLSVLYACS 524
           A  +F  M  K  ++WNT+I GY  + +  EAL LF+ +L      P   T   VL AC+
Sbjct: 300 AELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACA 359

Query: 525 HAGLVREGDEIFQSMIHDHGFKPLAEHYA-CMVDILGRAGQL 565
                 +G EI   ++ +  F     H A  +VD+  + G L
Sbjct: 360 SLSAFDKGREIHGYIMRNGYFSD--RHVANSLVDMYAKCGAL 399



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 92/290 (31%), Positives = 158/290 (54%), Gaps = 3/290 (1%)

Query: 280 NAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLK 339
           N +++    +G    S+ LF+++++S   ++S T   +   F     +H    +H F LK
Sbjct: 13  NILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILK 72

Query: 340 SGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISL 399
           SG    +SV  +L   Y +   +++ARK+FDE +E+ + SWN++I GY  NGL E+ +S+
Sbjct: 73  SGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSV 132

Query: 400 FQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAK 459
           F +M  S +  +  T+ S+ + CA    ISLG+ VH +     F         L+DMY+K
Sbjct: 133 FVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSK 192

Query: 460 CGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSV 519
           CG++  A+ +F  MS +S V++ +MI+GY   G   EA++LF EM   GI P   T  +V
Sbjct: 193 CGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAV 252

Query: 520 LYACSHAGLVREGDEIFQSMI-HDHGFKPLAEHYACMVDILGRAGQLEKA 568
           L  C+   L+ EG  + + +  +D GF     +   ++D+  + G +++A
Sbjct: 253 LNCCARYRLLDEGKRVHEWIKENDLGFDIFVSN--ALMDMYAKCGSMQEA 300



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 140/291 (48%), Gaps = 13/291 (4%)

Query: 36  GFQNDLSTVTKLAHRLSDFKATC----YARALFFSIPKPDLFLFNVIIRGFSNNEMPKSS 91
           G +   S   +  + L D  + C     A+A+F  +    +  +  +I G++   +   +
Sbjct: 171 GVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEA 230

Query: 92  ICFYTHLRKNTALTPDNFTYSFVLSAASACCDR----SIGVLLHGHAIVSGYGSDLFVGA 147
           +  +  + +   ++PD +T + VL+    CC R      G  +H     +  G D+FV  
Sbjct: 231 VKLFEEMEEE-GISPDVYTVTAVLN----CCARYRLLDEGKRVHEWIKENDLGFDIFVSN 285

Query: 148 ALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTW 207
           AL+D+Y K   ++ A  VF +M  KD + WN++I G  KNC   +++ +F  ++      
Sbjct: 286 ALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFS 345

Query: 208 LDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELL 267
            D  +VA VLPA A +     G EI    ++ G+    +V   LV  Y+KCG +  A +L
Sbjct: 346 PDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHML 405

Query: 268 FRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLI 318
           F DI   DL+S   MI+GY  +G  + ++ LF Q+  +    +  + V L+
Sbjct: 406 FDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLL 456



 Score = 82.4 bits (202), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 55/204 (26%), Positives = 99/204 (48%), Gaps = 9/204 (4%)

Query: 369 FDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAI 428
           FDE   +    WN ++    ++G    +I LF++M +S V  +  T S +  + + L ++
Sbjct: 1   FDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSV 60

Query: 429 SLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGY 488
             G+ +H  +    F     V  +L+  Y K   +  AR++FD M+ +  ++WN++I+GY
Sbjct: 61  HGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGY 120

Query: 489 GLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPL 548
             +G   + L +F +ML SGI     T +SV   C+ + L+  G       +H  G K  
Sbjct: 121 VSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLG-----RAVHSIGVKAC 175

Query: 549 --AEHYAC--MVDILGRAGQLEKA 568
              E   C  ++D+  + G L+ A
Sbjct: 176 FSREDRFCNTLLDMYSKCGDLDSA 199


>gi|147855060|emb|CAN82371.1| hypothetical protein VITISV_027622 [Vitis vinifera]
          Length = 697

 Score =  509 bits (1312), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 273/706 (38%), Positives = 416/706 (58%), Gaps = 17/706 (2%)

Query: 87  MPKSSICFYTHLRKNTA--LTPDNFTYSFVLSAASACCDRSIGVL-----LHGHAIVSGY 139
           MP  +  FY HL  N    L P        L+ + A   R +  L     +H   I SG 
Sbjct: 1   MPPVNFNFYRHLSSNPTQRLCP--------LAQSHASILRKLKDLKPLQQIHAQIITSGL 52

Query: 140 GSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGD 199
             + F+  +L++ Y     +  A+++F   P K+ V W  +ISGL KN CF ++I VF +
Sbjct: 53  THNTFLSNSLMNAYVYCGLLADAKQIFHHTPCKNVVSWTILISGLAKNDCFVEAIDVFRE 112

Query: 200 MVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCG 259
           M   G    ++ ++++VLPA A +  +R+   + C  ++ GF  +V+V T LV  YSK G
Sbjct: 113 MTM-GNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGGFEGNVFVETALVDMYSKFG 171

Query: 260 EVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIP 319
            +  A  LF  +   +++S NA++SGY+ +G +E ++ LF  +      V+  TI+ LIP
Sbjct: 172 CMGVARQLFESMSERNVVSWNAIVSGYSDHGFSEEAIDLFNLMRRKGLLVDFYTIMSLIP 231

Query: 320 VFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLAS 379
                G L +   IH F +++G  ++  + TAL  +Y   N ++ A ++F E   K +A+
Sbjct: 232 ASLSVGCLQVGTGIHGFIIRTGYENDKHIKTALMDIYVSHNCVDDAHRVFSEMFVKDVAA 291

Query: 380 WNAMIAGYTQNGLTEEAISLFQEMQA-SKVAPNPVTVSSILSACAQLGAISLGKWVHELV 438
           W  M+ G++     + AI  F +M     +  + + +  ILS+C+  GA+  G+ VH L 
Sbjct: 292 WTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLDSIVLMGILSSCSHSGALQQGRRVHALA 351

Query: 439 KSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEAL 498
               F +NI+V +A+IDMYA CGN+ +A+  F  M  K  V WN MI+G G++G+G +A+
Sbjct: 352 IKTCFANNIFVGSAVIDMYANCGNLEDAKRFFYGMGEKDVVCWNAMIAGNGMNGYGTDAI 411

Query: 499 QLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDI 558
            LF +M  SG+ P   TF+SVLYACSHAG+V EG +IF  M+      P  +HYAC++DI
Sbjct: 412 DLFLQMKGSGLDPDESTFVSVLYACSHAGMVYEGLQIFYHMVKTSHDIPNLQHYACVIDI 471

Query: 559 LGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYH 618
           LGRAGQL+ A  FI  +  +P   V+  LLGAC IH +  L    S+K+FE++P + GY+
Sbjct: 472 LGRAGQLDAAYSFINNMPFQPDFDVYSTLLGACRIHGNIKLGHEISQKIFEMEPNDAGYY 531

Query: 619 VLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIY 678
           VLLSN+Y+   ++      R  ++ ++L K PG + IE+    + F +G++ HPQ   I 
Sbjct: 532 VLLSNMYALAGNWEGVKMTRASLRSKRLKKDPGFSSIEINQEIYTFMAGEKDHPQYFKIE 591

Query: 679 AMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRII 738
            +L+ L  K+++AG+   T   L DV ++ K+ ++  HSEK+AIAFGL+ T+PGT IRI 
Sbjct: 592 GILKGLILKIKKAGYVPNTNVLLQDVSDDMKKDILYHHSEKMAIAFGLMRTKPGTIIRIT 651

Query: 739 KNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           KNLR C DCH+A+KF+SKV GRV+V++DANRFH F+ GVCSC DYW
Sbjct: 652 KNLRTCNDCHSASKFVSKVFGRVLVIKDANRFHVFQDGVCSCRDYW 697



 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 127/501 (25%), Positives = 249/501 (49%), Gaps = 16/501 (3%)

Query: 14  SLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATC----YARALFFSIPK 69
           S+L+  K    L Q HAQII  G  ++    T L++ L +    C     A+ +F   P 
Sbjct: 29  SILRKLKDLKPLQQIHAQIITSGLTHN----TFLSNSLMNAYVYCGLLADAKQIFHHTPC 84

Query: 70  PDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVL 129
            ++  + ++I G + N+    +I  +  +       P+  T S VL A +      I   
Sbjct: 85  KNVVSWTILISGLAKNDCFVEAIDVFREMTMGN-FKPNAVTISSVLPAFANLGLIRIAKS 143

Query: 130 LHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCC 189
           +H   +  G+  ++FV  ALVD+Y KF  +  AR++F+ M E++ V WN+++SG   +  
Sbjct: 144 VHCFWVRGGFEGNVFVETALVDMYSKFGCMGVARQLFESMSERNVVSWNAIVSGYSDHGF 203

Query: 190 FQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLT 249
            +++I +F +++R  G  +D  ++ +++PA   V  L++G  I    ++ G+ +  ++ T
Sbjct: 204 SEEAIDLF-NLMRRKGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIKT 262

Query: 250 GLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAE-R 308
            L+  Y     V+ A  +F ++   D+ +   M++G++     + +++ F ++L     +
Sbjct: 263 ALMDIYVSHNCVDDAHRVFSEMFVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLK 322

Query: 309 VNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKL 368
           ++S  ++G++      G L     +H+  +K+   +N  V +A+  +Y+    +E A++ 
Sbjct: 323 LDSIVLMGILSSCSHSGALQQGRRVHALAIKTCFANNIFVGSAVIDMYANCGNLEDAKRF 382

Query: 369 FDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAI 428
           F    EK +  WNAMIAG   NG   +AI LF +M+ S + P+  T  S+L AC+  G +
Sbjct: 383 FYGMGEKDVVCWNAMIAGNGMNGYGTDAIDLFLQMKGSGLDPDESTFVSVLYACSHAGMV 442

Query: 429 SLGKWV-HELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEV-TWNTMIS 486
             G  + + +VK+ +   N+     +ID+  + G +  A    + M  + +   ++T++ 
Sbjct: 443 YEGLQIFYHMVKTSHDIPNLQHYACVIDILGRAGQLDAAYSFINNMPFQPDFDVYSTLLG 502

Query: 487 GYGLHGH---GLEALQLFSEM 504
              +HG+   G E  Q   EM
Sbjct: 503 ACRIHGNIKLGHEISQKIFEM 523


>gi|302815813|ref|XP_002989587.1| hypothetical protein SELMODRAFT_130050 [Selaginella moellendorffii]
 gi|300142765|gb|EFJ09463.1| hypothetical protein SELMODRAFT_130050 [Selaginella moellendorffii]
          Length = 736

 Score =  509 bits (1311), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 267/730 (36%), Positives = 420/730 (57%), Gaps = 9/730 (1%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           A A+F +I  P+   + +I+  F+ N   + ++ +Y  +     L PD   +   +   S
Sbjct: 11  ALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLE-GLRPDGAMFVVAIGVCS 69

Query: 120 ACCDRSIGVLLHGHAIVSGYGS-DLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWN 178
           +  D   G LLH   + +     D+ +G AL+ +Y +   ++ ARK FD+M +K  V WN
Sbjct: 70  SSKDLKQGQLLHAMILETRLLEFDIILGTALITMYARCRDLELARKTFDEMGKKTLVTWN 129

Query: 179 SMISGLMKNCCFQDSIWVFGDMVRNG--GTWLDSTSVAAVLPAVAEVQELRLGMEIQCLG 236
           ++I+G  +N   + ++ ++ DMV     G   D+ + ++ L A   V ++  G EI+   
Sbjct: 130 ALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACTVVGDISQGREIEART 189

Query: 237 LKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSL 296
           +  G+     V   L++ YSKCG +E A  +F  +   D+I+ N MISGY   G    +L
Sbjct: 190 VASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYAKQGAATQAL 249

Query: 297 RLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVY 356
            LF+++  +  + N  T +GL+        L     IH    + G  S+  +   L  +Y
Sbjct: 250 ELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVREDGYESDLVIGNVLLNMY 309

Query: 357 SRLNE-MEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTV 415
           ++ +  +E AR++F+    + + +WN +I  Y Q G  ++A+ +F++MQ   VAPN +T+
Sbjct: 310 TKCSSSLEEARQVFERMRTRDVITWNILIVAYVQYGQAKDALDIFKQMQLENVAPNEITL 369

Query: 416 SSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSH 475
           S++LSACA LGA   GK VH L+ S   ++++ +  +L++MY +CG++ +   +F  +  
Sbjct: 370 SNVLSACAVLGAKRQGKAVHALIASGRCKADVVLENSLMNMYNRCGSLDDTVGVFAAIRD 429

Query: 476 KSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEI 535
           KS V+W+T+I+ Y  HGH    L+ F E+L  G+    VT +S L ACSH G+++EG + 
Sbjct: 430 KSLVSWSTLIAAYAQHGHSRTGLEHFWELLQEGLAADDVTMVSTLSACSHGGMLKEGVQT 489

Query: 536 FQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHK 595
           F SM+ DHG  P   H+ CMVD+L RAG+LE A   I  +   P    W +LL  C +H 
Sbjct: 490 FLSMVGDHGLAPDYRHFLCMVDLLSRAGRLEAAENLIHDMPFLPDAVAWTSLLSGCKLHN 549

Query: 596 DTNLARVASEKLFELDPENVGYHV-LLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTL 654
           DT  A   ++KLFEL+ E+    V LLSN+Y+    +     VR+   +R   K PGC+ 
Sbjct: 550 DTKRAARVADKLFELESEDEHSTVTLLSNVYAEAGRW---DDVRKTRNRRAARKNPGCSY 606

Query: 655 IEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMK 714
           IE+  T H F +GD+ HP+   I A +++L+ +M++AG+  +    LH+V+EEEKE M+ 
Sbjct: 607 IEINDTVHEFVAGDKSHPEEELIAAEIKRLSKQMKDAGYVPDMRMVLHNVKEEEKEQMLC 666

Query: 715 VHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFK 774
            HSEKLAIA+GLI+T PGT + I+KNLR C+DCH A KFIS++ GR IVVRD+ RFHHF+
Sbjct: 667 YHSEKLAIAYGLISTPPGTPLHIVKNLRACVDCHAAAKFISRIVGRKIVVRDSTRFHHFE 726

Query: 775 GGVCSCGDYW 784
            G CSC DYW
Sbjct: 727 NGSCSCKDYW 736



 Score =  182 bits (461), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 98/293 (33%), Positives = 166/293 (56%), Gaps = 4/293 (1%)

Query: 254 FYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSST 313
            Y KCG V  A  +F  I  P+ +S   +++ +  NG    +L  +R+++    R + + 
Sbjct: 1   MYGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAM 60

Query: 314 IVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVL-TALSTVYSRLNEMEAARKLFDES 372
            V  I V      L     +H+  L++ ++    +L TAL T+Y+R  ++E ARK FDE 
Sbjct: 61  FVVAIGVCSSSKDLKQGQLLHAMILETRLLEFDIILGTALITMYARCRDLELARKTFDEM 120

Query: 373 SEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASK---VAPNPVTVSSILSACAQLGAIS 429
            +K+L +WNA+IAGY++NG    A+ ++Q+M +     + P+ +T SS L AC  +G IS
Sbjct: 121 GKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACTVVGDIS 180

Query: 430 LGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYG 489
            G+ +     +  + S+  V  ALI+MY+KCG++  AR++FD + ++  + WNTMISGY 
Sbjct: 181 QGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYA 240

Query: 490 LHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHD 542
             G   +AL+LF  M  +  +P+ VTF+ +L AC++   + +G  I + +  D
Sbjct: 241 KQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVRED 293



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 61/218 (27%), Positives = 113/218 (51%), Gaps = 5/218 (2%)

Query: 355 VYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVT 414
           +Y +   +  A  +F      +  SW  ++A + +NG   EA+  ++ M    + P+   
Sbjct: 1   MYGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAM 60

Query: 415 VSSILSACAQLGAISLGKWVHELV-KSRNFESNIYVSTALIDMYAKCGNIVEARELFDLM 473
               +  C+    +  G+ +H ++ ++R  E +I + TALI MYA+C ++  AR+ FD M
Sbjct: 61  FVVAIGVCSSSKDLKQGQLLHAMILETRLLEFDIILGTALITMYARCRDLELARKTFDEM 120

Query: 474 SHKSEVTWNTMISGYGLHGHGLEALQLFSEMLH---SGIRPSGVTFLSVLYACSHAGLVR 530
             K+ VTWN +I+GY  +G    AL+++ +M+     G++P  +TF S LYAC+  G + 
Sbjct: 121 GKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACTVVGDIS 180

Query: 531 EGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKA 568
           +G EI    +   G+   +     ++++  + G LE A
Sbjct: 181 QGREIEARTVAS-GYASDSIVQNALINMYSKCGSLESA 217


>gi|297807711|ref|XP_002871739.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297317576|gb|EFH47998.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 850

 Score =  509 bits (1311), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 293/818 (35%), Positives = 447/818 (54%), Gaps = 59/818 (7%)

Query: 20  KTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPD--LFLFNV 77
           KT SQ+   H +++  G    L+  + L           +A +L    P  D  ++ +N 
Sbjct: 39  KTISQVKLIHQKLLSFGILT-LNLTSHLISTYISLGCLSHAVSLLRRFPPSDAGVYHWNS 97

Query: 78  IIRGFSNNEMPK---SSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHA 134
           +IR + NN       SS C    L  + + TPDN+T+ FV  A         G   H  +
Sbjct: 98  LIRSYGNNGRANKCLSSFC----LMHSLSWTPDNYTFPFVFKACGEISSVRCGDSSHALS 153

Query: 135 IVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSI 194
            V+G+ S++FVG ALV +Y +   +  ARKVFD+MP  D V WNS+I    K    + ++
Sbjct: 154 RVTGFMSNVFVGNALVAMYSRCGSLSDARKVFDEMPVWDVVSWNSIIESYAKLGKPKMAL 213

Query: 195 WVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSF 254
            +F  M    G   D  ++  VLP  A V    LG +     +      +++V   LV  
Sbjct: 214 EMFSKMTNEFGFRPDDITLVNVLPPCASVGTRSLGKQFHGFAVTSEMIQNMFVGNCLVDM 273

Query: 255 YSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLF--------------- 299
           Y+K G ++ A  +F ++   D++S NAM++GY+  G+ E ++RLF               
Sbjct: 274 YAKFGMMDEANTVFSNMPVKDVVSWNAMVAGYSQIGRFEDAVRLFEQMQEEKIKMDVVTW 333

Query: 300 --------------------RQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLK 339
                               RQ+L+S  + N  T++ ++      G L     IH + +K
Sbjct: 334 SAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIK 393

Query: 340 -------SGIVSNSSVLTALSTVYSRLNEMEAARKLFDESS--EKSLASWNAMIAGYTQN 390
                  +G    + V+  L  +Y++  +++ AR +FD  S  E+ + +W  MI GY+Q+
Sbjct: 394 YPMDLRKNGHGDENMVINQLIDMYAKCKKVDIARAMFDSLSPKERDVVTWTVMIGGYSQH 453

Query: 391 GLTEEAISLFQEM--QASKVAPNPVTVSSILSACAQLGAISLGKWVHEL-VKSRNFESNI 447
           G   +A+ L  EM  +  +  PN  T+S  L ACA L A+S+GK +H   ++++     +
Sbjct: 454 GDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALSIGKQIHAYALRNQQNAVPL 513

Query: 448 YVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHS 507
           +VS  LIDMYAKCG+I +AR +FD M  K+EVTW ++++GYG+HG+G EAL +F EM   
Sbjct: 514 FVSNCLIDMYAKCGDIGDARLVFDNMMEKNEVTWTSLMTGYGMHGYGEEALGIFEEMRRI 573

Query: 508 GIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEK 567
           G +  GVT L VLYACSH+G++ +G E F  M  D G  P  EHYAC+VD+LGRAG+L  
Sbjct: 574 GFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTDFGVSPGPEHYACLVDLLGRAGRLNA 633

Query: 568 ALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSA 627
           AL  I+ + +EP P VW ALL  C IH    L   A++K+ EL   N G + LLSN+Y+ 
Sbjct: 634 ALRLIEEMPMEPPPVVWVALLSCCRIHGKVELGEYAAKKITELASNNDGSYTLLSNMYAN 693

Query: 628 ERDYLQAATVRQVVKKRKLAKAPGCTLIE-VGGTPHVFTSGDQLHPQSTAIYAMLEKLNG 686
              +     +R +++ + + K PGC+ +E + GT   F  GD+ HP +  IY +L     
Sbjct: 694 AGRWKDVTRIRSLMRHKGIKKRPGCSWVEGIKGTTTFFV-GDKTHPHAKEIYQVLSDHMQ 752

Query: 687 KMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLD 746
           ++++ G+  ET  ALHDV++EEK+ ++  HSEKLA+A+G++ T  G  IRI KNLRVC D
Sbjct: 753 RIKDIGYVPETGFALHDVDDEEKDDLLFEHSEKLALAYGILTTPQGAAIRITKNLRVCGD 812

Query: 747 CHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           CHTA  ++S++    I++RD++RFHHFK G+CSC  YW
Sbjct: 813 CHTAFTYMSRIIDHEIILRDSSRFHHFKNGLCSCKGYW 850


>gi|115457318|ref|NP_001052259.1| Os04g0218100 [Oryza sativa Japonica Group]
 gi|113563830|dbj|BAF14173.1| Os04g0218100, partial [Oryza sativa Japonica Group]
          Length = 890

 Score =  509 bits (1311), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 304/853 (35%), Positives = 454/853 (53%), Gaps = 82/853 (9%)

Query: 12  FLSLLKGAKTQSQLTQTHAQIIIHG--------------------FQNDLSTVTKLAHRL 51
           F SLLK  K+ + + Q H QII  G                    F +  S  T +    
Sbjct: 40  FASLLKECKSANTVHQIHQQIIASGLLSLPTPLLSVSLPALPSEPFISPRSLGTGVVASY 99

Query: 52  SDFKATCYARALFFSI-PKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFT 110
               AT YA  +   + P P ++ +N++IR         S+I     + +     PD+FT
Sbjct: 100 LACGATDYALLVLERVTPSPAVW-WNLLIREHIKQGRLDSAINVSCRMLR-AGTRPDHFT 157

Query: 111 YSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMP 170
              VL A         G   HG    +G+ S++F+  ALV +Y +   ++ A  +FD++ 
Sbjct: 158 LPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFDEIT 217

Query: 171 EK---DTVLWNSMISGLMKNCCFQDSIWVFGDMV-----RNGGTWLDSTSVAAVLPAVAE 222
           ++   D + WNS++S  +K+     ++ +F  M      +      D  S+  +LPA   
Sbjct: 218 QRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPACGS 277

Query: 223 VQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAM 282
           ++ +    E+    ++ G    V+V   L+  Y+KCG +E A  +F  +   D++S NAM
Sbjct: 278 LKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAM 337

Query: 283 ISGYTCNGKTESS-----------------------------------LRLFRQLLASAE 307
           ++GY+ +G  E++                                   L LFRQ++ S  
Sbjct: 338 VAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFRQMIFSGS 397

Query: 308 RVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVS----------NSSVLTALSTVYS 357
             N  TI+ ++      G       IH++ LK+ +++          +  V  AL  +YS
Sbjct: 398 LPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYS 457

Query: 358 RLNEMEAARKLFDES--SEKSLASWNAMIAGYTQNGLTEEAISLFQEM--QASKVAPNPV 413
           +    +AAR +FD+    E+++ +W  MI G+ Q G + +A+ LF EM  +   VAPN  
Sbjct: 458 KCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAY 517

Query: 414 TVSSILSACAQLGAISLGKWVHELV-KSRNFESNIY-VSTALIDMYAKCGNIVEARELFD 471
           T+S IL ACA L AI +GK +H  V +   +ES+ Y V+  LIDMY+KCG++  AR +FD
Sbjct: 518 TISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSKCGDVDTARHVFD 577

Query: 472 LMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVRE 531
            MS KS ++W +M++GYG+HG G EAL +F +M  +G  P  +TFL VLYACSH G+V +
Sbjct: 578 SMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQ 637

Query: 532 GDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGAC 591
           G   F SM  D+G  P AEHYAC +D+L R+G+L+KA   +K + +EP   VW ALL AC
Sbjct: 638 GLSYFDSMSADYGLTPRAEHYACAIDLLARSGRLDKAWRTVKDMPMEPTAVVWVALLSAC 697

Query: 592 MIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPG 651
            +H +  LA  A  KL E++ EN G + L+SNIY+    +   A +R ++KK  + K PG
Sbjct: 698 RVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVARIRHLMKKSGIKKRPG 757

Query: 652 CTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKEL 711
           C+ ++       F  GD+ HP S  IYA+LE L  +++  G+  ET  ALHDV+EEEK  
Sbjct: 758 CSWVQGQKGTASFFVGDRSHPLSPQIYALLESLIDRIKAMGYVPETNFALHDVDEEEKNN 817

Query: 712 MMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFH 771
           ++  HSEKLA+A+GL+ T PG  IRI KNLRVC DCH+A  +ISK+    IVVRD +RFH
Sbjct: 818 LLVEHSEKLALAYGLLTTSPGCPIRITKNLRVCGDCHSAFTYISKIVDHEIVVRDPSRFH 877

Query: 772 HFKGGVCSCGDYW 784
           HFK G CSCG YW
Sbjct: 878 HFKNGSCSCGGYW 890


>gi|21741755|emb|CAD39781.1| OSJNBa0060B20.9 [Oryza sativa Japonica Group]
          Length = 897

 Score =  509 bits (1310), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 304/853 (35%), Positives = 454/853 (53%), Gaps = 82/853 (9%)

Query: 12  FLSLLKGAKTQSQLTQTHAQIIIHG--------------------FQNDLSTVTKLAHRL 51
           F SLLK  K+ + + Q H QII  G                    F +  S  T +    
Sbjct: 47  FASLLKECKSANTVHQIHQQIIASGLLSLPTPLLSVSLPALPSEPFISPRSLGTGVVASY 106

Query: 52  SDFKATCYARALFFSI-PKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFT 110
               AT YA  +   + P P ++ +N++IR         S+I     + +     PD+FT
Sbjct: 107 LACGATDYALLVLERVTPSPAVW-WNLLIREHIKQGRLDSAINVSCRMLR-AGTRPDHFT 164

Query: 111 YSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMP 170
              VL A         G   HG    +G+ S++F+  ALV +Y +   ++ A  +FD++ 
Sbjct: 165 LPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFDEIT 224

Query: 171 EK---DTVLWNSMISGLMKNCCFQDSIWVFGDMV-----RNGGTWLDSTSVAAVLPAVAE 222
           ++   D + WNS++S  +K+     ++ +F  M      +      D  S+  +LPA   
Sbjct: 225 QRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPACGS 284

Query: 223 VQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAM 282
           ++ +    E+    ++ G    V+V   L+  Y+KCG +E A  +F  +   D++S NAM
Sbjct: 285 LKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAM 344

Query: 283 ISGYTCNGKTESS-----------------------------------LRLFRQLLASAE 307
           ++GY+ +G  E++                                   L LFRQ++ S  
Sbjct: 345 VAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFRQMIFSGS 404

Query: 308 RVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVS----------NSSVLTALSTVYS 357
             N  TI+ ++      G       IH++ LK+ +++          +  V  AL  +YS
Sbjct: 405 LPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYS 464

Query: 358 RLNEMEAARKLFDES--SEKSLASWNAMIAGYTQNGLTEEAISLFQEM--QASKVAPNPV 413
           +    +AAR +FD+    E+++ +W  MI G+ Q G + +A+ LF EM  +   VAPN  
Sbjct: 465 KCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAY 524

Query: 414 TVSSILSACAQLGAISLGKWVHELV-KSRNFESNIY-VSTALIDMYAKCGNIVEARELFD 471
           T+S IL ACA L AI +GK +H  V +   +ES+ Y V+  LIDMY+KCG++  AR +FD
Sbjct: 525 TISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSKCGDVDTARHVFD 584

Query: 472 LMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVRE 531
            MS KS ++W +M++GYG+HG G EAL +F +M  +G  P  +TFL VLYACSH G+V +
Sbjct: 585 SMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQ 644

Query: 532 GDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGAC 591
           G   F SM  D+G  P AEHYAC +D+L R+G+L+KA   +K + +EP   VW ALL AC
Sbjct: 645 GLSYFDSMSADYGLTPRAEHYACAIDLLARSGRLDKAWRTVKDMPMEPTAVVWVALLSAC 704

Query: 592 MIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPG 651
            +H +  LA  A  KL E++ EN G + L+SNIY+    +   A +R ++KK  + K PG
Sbjct: 705 RVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVARIRHLMKKSGIKKRPG 764

Query: 652 CTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKEL 711
           C+ ++       F  GD+ HP S  IYA+LE L  +++  G+  ET  ALHDV+EEEK  
Sbjct: 765 CSWVQGQKGTASFFVGDRSHPLSPQIYALLESLIDRIKAMGYVPETNFALHDVDEEEKNN 824

Query: 712 MMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFH 771
           ++  HSEKLA+A+GL+ T PG  IRI KNLRVC DCH+A  +ISK+    IVVRD +RFH
Sbjct: 825 LLVEHSEKLALAYGLLTTSPGCPIRITKNLRVCGDCHSAFTYISKIVDHEIVVRDPSRFH 884

Query: 772 HFKGGVCSCGDYW 784
           HFK G CSCG YW
Sbjct: 885 HFKNGSCSCGGYW 897


>gi|225465296|ref|XP_002268999.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g14470-like [Vitis vinifera]
          Length = 729

 Score =  509 bits (1310), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 293/767 (38%), Positives = 433/767 (56%), Gaps = 57/767 (7%)

Query: 23  SQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATC-YARALFFSIPKPDLFLFNVIIRG 81
           + L Q HAQII +   +    V  L +  +  +A   Y   LF S   P++F+F  ++R 
Sbjct: 15  NHLRQLHAQIIHNSLHHHNYWVALLINHCTRLRAPPHYTHLLFNSTLNPNVFVFTSMLRF 74

Query: 82  FSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGS 141
           +S+ +     +  Y  + +   + PD F Y  ++ +A      + G+  H H +  G+GS
Sbjct: 75  YSHLQDHAKVVLMYEQM-QGCGVRPDAFVYPILIKSAG-----TGGIGFHAHVLKLGHGS 128

Query: 142 DLFVGAALVDLYFKFSWVKSARKVFDKMP--EKDTVLWNSMISGLMKNCCFQDSIWVFGD 199
           D FV  A++D+Y +   +  ARKVFD++P  E+    WN+M+SG  K      + W+F  
Sbjct: 129 DAFVRNAVIDMYARLGPIGHARKVFDEIPDYERKVADWNAMVSGYWKWESEGQAQWLFDV 188

Query: 200 MV-RNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKC 258
           M  RN  TW                                         T +V+ Y+K 
Sbjct: 189 MPERNVITW-----------------------------------------TAMVTGYAKV 207

Query: 259 GEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLI 318
            ++E A   F  +    ++S NAM+SGY  NG  E +LRLF +++ +    + +T V +I
Sbjct: 208 KDLEAARRYFDCMPERSVVSWNAMLSGYAQNGLAEEALRLFDEMVNAGIEPDETTWVTVI 267

Query: 319 PVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLA 378
                 G   L   +     +  I  N  V TAL  +Y++  ++++ARKLF+    +++ 
Sbjct: 268 SACSSRGDPCLAASLVRTLHQKRIQLNCFVRTALLDMYAKFGDLDSARKLFNTMPGRNVV 327

Query: 379 SWNAMIAGYTQNGLTEEAISLFQEM-QASKVAPNPVTVSSILSACAQLGAISLGKWVHEL 437
           +WN+MIAGY QNG +  AI LF+EM  A K+ P+ VT+ S++SAC  LGA+ LG WV   
Sbjct: 328 TWNSMIAGYAQNGQSAMAIELFKEMITAKKLTPDEVTMVSVISACGHLGALELGNWVVRF 387

Query: 438 VKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEA 497
           +     + +I    A+I MY++CG++ +A+ +F  M+ +  V++NT+ISG+  HGHG+EA
Sbjct: 388 LTENQIKLSISGHNAMIFMYSRCGSMEDAKRVFQEMATRDVVSYNTLISGFAAHGHGVEA 447

Query: 498 LQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVD 557
           + L S M   GI P  VTF+ VL ACSHAGL+ EG ++F+S I D    P  +HYACMVD
Sbjct: 448 INLMSTMKEGGIEPDRVTFIGVLTACSHAGLLEEGRKVFES-IKD----PAIDHYACMVD 502

Query: 558 ILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGY 617
           +LGR G+LE A   ++ + +EP   V+G+LL A  IHK   L  +A+ KLFEL+P+N G 
Sbjct: 503 LLGRVGELEDAKRTMERMPMEPHAGVYGSLLNASRIHKQVELGELAANKLFELEPDNSGN 562

Query: 618 HVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAI 677
            +LLSNIY++   +     +R+ +KK  + K  G + +E GG  H F   D+ H +S  I
Sbjct: 563 FILLSNIYASAGRWKDVERIREAMKKGGVKKTTGWSWVEYGGKLHKFIVADRSHERSDDI 622

Query: 678 YAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRI 737
           Y +L +L  KMREAG+  +    L DVEEEEKE ++  HSEKLAI + L+ +E G  IR+
Sbjct: 623 YQLLIELRKKMREAGYIADKSCVLRDVEEEEKEEIVGTHSEKLAICYALLVSEAGAVIRV 682

Query: 738 IKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           +KNLRVC DCHTA K ISK+ GRVI+VRD NRFH F  G+CSC DYW
Sbjct: 683 VKNLRVCWDCHTAIKMISKLEGRVIIVRDNNRFHCFNDGLCSCKDYW 729


>gi|357508385|ref|XP_003624481.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|87240699|gb|ABD32557.1| Tetratricopeptide-like helical [Medicago truncatula]
 gi|355499496|gb|AES80699.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 672

 Score =  508 bits (1308), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 257/635 (40%), Positives = 388/635 (61%), Gaps = 14/635 (2%)

Query: 163 RKVFDKMPEKDTVL-WNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVA 221
           R +F K  +K +V  WNS+I+   ++     +++ F  M R      + ++    + + +
Sbjct: 39  RSMFGKYVDKTSVYSWNSIIADFARSGDSLQALYAFSSM-RKLSLHPNRSTFPCTIKSCS 97

Query: 222 EVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNA 281
            + +L  G +I       G+   ++V + L+  YSKCG +  A  LF +I   +++S  +
Sbjct: 98  SLYDLCAGKQIHQQAFVFGYGSDIFVASALIDMYSKCGYLNDARKLFDEIPERNVVSWTS 157

Query: 282 MISGYTCNGKTESSLRLFRQLLASAE----------RVNSSTIVG-LIPVFYPFGHLHLT 330
           MISGY  N +   ++ LF++ L   E              S ++G +I          +T
Sbjct: 158 MISGYVQNERAREAVFLFKEFLLVDETDYDEIVGVGVGVDSVLLGCVISACARVCVKSVT 217

Query: 331 NCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQN 390
            C+H   +K G     +V   L   Y++  E+  +RK+FD   E  + SWN++IA Y QN
Sbjct: 218 ECVHGLAVKKGFEGCLAVGNTLMDAYAKCGEISVSRKVFDGMEETDVCSWNSLIAVYAQN 277

Query: 391 GLTEEAISLFQEM-QASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYV 449
           GL+ EA SLF +M +  +V  N VT+S++L ACA  GA+ +GK +H+ V     E N+ V
Sbjct: 278 GLSVEAFSLFSDMVKRGEVRYNAVTLSAVLLACAHSGALQIGKCIHDQVVKMELEDNLVV 337

Query: 450 STALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGI 509
            T+++DMY KCG +  AR+ FD +  K+  +W  M++GYG+HGHG EA+++F EM+  GI
Sbjct: 338 GTSIVDMYCKCGRVEMARKAFDRLKRKNVKSWTVMVAGYGMHGHGKEAMKVFYEMIRCGI 397

Query: 510 RPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKAL 569
           +P+ +TF+SVL ACSHAGL++EG   F  M  +   +P  EHY+CMVD+LGRAG L++A 
Sbjct: 398 KPNYITFVSVLAACSHAGLLKEGWHWFNKMKCEFDVEPGIEHYSCMVDLLGRAGYLKEAY 457

Query: 570 EFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAER 629
             I+ + V+P   VWG+LLGAC IHK+  L  +++ KLF+LDP N GY+VLLSNIY+   
Sbjct: 458 GLIQEMKVKPDFIVWGSLLGACRIHKNVELGEISARKLFKLDPSNCGYYVLLSNIYADAG 517

Query: 630 DYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMR 689
            +     +R ++K   L K PG +++E  G  HVF  GD+ HPQ   IY  L++LN K++
Sbjct: 518 RWDDVERMRILMKNHGLLKTPGYSIVEHKGRVHVFLVGDKEHPQHEKIYEYLDELNVKLQ 577

Query: 690 EAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHT 749
           E G+     + L+DV+ EEK ++++VHSEKLA+AFG++ + PG+ I+IIKNLR+C DCH 
Sbjct: 578 EVGYMPNVTSVLYDVDVEEKGMVLRVHSEKLAVAFGIMNSVPGSVIQIIKNLRICGDCHF 637

Query: 750 ATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           A K ISK+  R IV+RD+ RFHHFK G+CSCGDYW
Sbjct: 638 AIKLISKIVNREIVIRDSKRFHHFKDGLCSCGDYW 672



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 129/445 (28%), Positives = 231/445 (51%), Gaps = 15/445 (3%)

Query: 61  RALFFS-IPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           R++F   + K  ++ +N II  F+ +     ++  ++ +RK  +L P+  T+   + + S
Sbjct: 39  RSMFGKYVDKTSVYSWNSIIADFARSGDSLQALYAFSSMRK-LSLHPNRSTFPCTIKSCS 97

Query: 120 ACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNS 179
           +  D   G  +H  A V GYGSD+FV +AL+D+Y K  ++  ARK+FD++PE++ V W S
Sbjct: 98  SLYDLCAGKQIHQQAFVFGYGSDIFVASALIDMYSKCGYLNDARKLFDEIPERNVVSWTS 157

Query: 180 MISGLMKNCCFQDSIWVFG----------DMVRNGGTWLDSTSVAAVLPAVAEVQELRLG 229
           MISG ++N   ++++++F           D +   G  +DS  +  V+ A A V    + 
Sbjct: 158 MISGYVQNERAREAVFLFKEFLLVDETDYDEIVGVGVGVDSVLLGCVISACARVCVKSVT 217

Query: 230 MEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCN 289
             +  L +K GF   + V   L+  Y+KCGE+  +  +F  +   D+ S N++I+ Y  N
Sbjct: 218 ECVHGLAVKKGFEGCLAVGNTLMDAYAKCGEISVSRKVFDGMEETDVCSWNSLIAVYAQN 277

Query: 290 GKTESSLRLFRQLLASAE-RVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSV 348
           G +  +  LF  ++   E R N+ T+  ++      G L +  CIH   +K  +  N  V
Sbjct: 278 GLSVEAFSLFSDMVKRGEVRYNAVTLSAVLLACAHSGALQIGKCIHDQVVKMELEDNLVV 337

Query: 349 LTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKV 408
            T++  +Y +   +E ARK FD    K++ SW  M+AGY  +G  +EA+ +F EM    +
Sbjct: 338 GTSIVDMYCKCGRVEMARKAFDRLKRKNVKSWTVMVAGYGMHGHGKEAMKVFYEMIRCGI 397

Query: 409 APNPVTVSSILSACAQLGAISLG-KWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEAR 467
            PN +T  S+L+AC+  G +  G  W +++    + E  I   + ++D+  + G + EA 
Sbjct: 398 KPNYITFVSVLAACSHAGLLKEGWHWFNKMKCEFDVEPGIEHYSCMVDLLGRAGYLKEAY 457

Query: 468 ELFDLMSHKSE-VTWNTMISGYGLH 491
            L   M  K + + W +++    +H
Sbjct: 458 GLIQEMKVKPDFIVWGSLLGACRIH 482



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 125/484 (25%), Positives = 213/484 (44%), Gaps = 53/484 (10%)

Query: 8   SRNLFLSLLKGAKTQSQL---TQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALF 64
           +R+ F   +K   +   L    Q H Q  + G+ +D+   + L    S       AR LF
Sbjct: 85  NRSTFPCTIKSCSSLYDLCAGKQIHQQAFVFGYGSDIFVASALIDMYSKCGYLNDARKLF 144

Query: 65  FSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLR----------KNTALTPDNFTYSFV 114
             IP+ ++  +  +I G+  NE  + ++  +                  +  D+     V
Sbjct: 145 DEIPERNVVSWTSMISGYVQNERAREAVFLFKEFLLVDETDYDEIVGVGVGVDSVLLGCV 204

Query: 115 LSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDT 174
           +SA +  C +S+   +HG A+  G+   L VG  L+D Y K   +  +RKVFD M E D 
Sbjct: 205 ISACARVCVKSVTECVHGLAVKKGFEGCLAVGNTLMDAYAKCGEISVSRKVFDGMEETDV 264

Query: 175 VLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQC 234
             WNS+I+   +N    ++  +F DMV+ G    ++ +++AVL A A    L++G  I  
Sbjct: 265 CSWNSLIAVYAQNGLSVEAFSLFSDMVKRGEVRYNAVTLSAVLLACAHSGALQIGKCIHD 324

Query: 235 LGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTES 294
             +K+   D++ V T +V  Y KCG VE A   F  + R ++ S   M++GY  +G  + 
Sbjct: 325 QVVKMELEDNLVVGTSIVDMYCKCGRVEMARKAFDRLKRKNVKSWTVMVAGYGMHGHGKE 384

Query: 295 SLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALST 354
           ++++F +++    + N  T V +           L  C H+  LK G             
Sbjct: 385 AMKVFYEMIRCGIKPNYITFVSV-----------LAACSHAGLLKEG------------- 420

Query: 355 VYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVT 414
            +   N+M+     FD   E  +  ++ M+    + G  +EA  L QEM   KV P+ + 
Sbjct: 421 -WHWFNKMKCE---FD--VEPGIEHYSCMVDLLGRAGYLKEAYGLIQEM---KVKPDFIV 471

Query: 415 VSSILSACAQLGAISLGKWVHELVKSRNFE---SNIYVSTALIDMYAKCGNIVEARELFD 471
             S+L AC     + LG    E+   + F+   SN      L ++YA  G   +   +  
Sbjct: 472 WGSLLGACRIHKNVELG----EISARKLFKLDPSNCGYYVLLSNIYADAGRWDDVERMRI 527

Query: 472 LMSH 475
           LM +
Sbjct: 528 LMKN 531


>gi|225450539|ref|XP_002277347.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Vitis vinifera]
          Length = 808

 Score =  508 bits (1308), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 274/794 (34%), Positives = 425/794 (53%), Gaps = 74/794 (9%)

Query: 24  QLTQTHAQIIIHGFQNDLSTVTKLAHRLSD--FKATCYARALFFSIPKPDLFLFNVIIRG 81
           Q  +  +Q+I+ GF +D    ++L    +D  F    Y+  +F  I   + F++N ++R 
Sbjct: 56  QFNRILSQMILTGFISDTFAASRLLKFSTDSPFIGLDYSLQIFDRIENSNGFMWNTMMRA 115

Query: 82  FSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGS 141
           +  +   + ++  Y  + KN  + PDN+TY  V+ A +       G  +H H +  G+ S
Sbjct: 116 YIQSNSAEKALLLYKLMVKNN-VGPDNYTYPLVVQACAVRLLEFGGKEIHDHVLKVGFDS 174

Query: 142 DLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMV 201
           D++V   L+++Y     ++ ARK+FD+ P  D+V WNS+++G +K    +++  +F  M 
Sbjct: 175 DVYVQNTLINMYAVCGNMRDARKLFDESPVLDSVSWNSILAGYVKKGDVEEAKLIFDQMP 234

Query: 202 RNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEV 261
           +                                         ++     ++    K G+V
Sbjct: 235 QR----------------------------------------NIVASNSMIVLLGKMGQV 254

Query: 262 ERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVF 321
             A  LF ++   D++S +A+ISGY  NG  E +L +F ++ A+  R++   +V ++   
Sbjct: 255 MEAWKLFNEMDEKDMVSWSALISGYEQNGMYEEALVMFIEMNANGMRLDEVVVVSVLSAC 314

Query: 322 YPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEM------------------- 362
                +     IH   ++ GI S  ++  AL  +YS   E+                   
Sbjct: 315 AHLSIVKTGKMIHGLVIRMGIESYVNLQNALIHMYSGSGEIMDAQKLFNGSHNLDQISWN 374

Query: 363 ------------EAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAP 410
                       E AR LFD   EK + SW+A+I+GY Q+    E ++LF EMQ  ++ P
Sbjct: 375 SMISGCMKCGSVEKARALFDVMPEKDIVSWSAVISGYAQHDCFSETLALFHEMQLGQIRP 434

Query: 411 NPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELF 470
           +   + S++SAC  L A+  GKWVH  ++    + N+ + T L+DMY KCG +  A E+F
Sbjct: 435 DETILVSVISACTHLAALDQGKWVHAYIRKNGLKVNVILGTTLLDMYMKCGCVENALEVF 494

Query: 471 DLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVR 530
           + M  K   +WN +I G  ++G    +L +FSEM ++G+ P+ +TF+ VL AC H GLV 
Sbjct: 495 NGMEEKGVSSWNALIIGLAVNGLVERSLDMFSEMKNNGVIPNEITFMGVLGACRHMGLVD 554

Query: 531 EGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGA 590
           EG   F SMI  HG +P  +HY CMVD+LGRAG L +A + I+ + + P  A WGALLGA
Sbjct: 555 EGRCHFASMIEKHGIEPNVKHYGCMVDLLGRAGLLNEAEKLIESMPMAPDVATWGALLGA 614

Query: 591 CMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAP 650
           C  H DT +      KL EL P++ G+HVLLSNI++++ D+     VR ++K++ + K P
Sbjct: 615 CKKHGDTEMGERVGRKLIELQPDHDGFHVLLSNIFASKGDWEDVLEVRGMMKQQGVVKTP 674

Query: 651 GCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKE 710
           GC+LIE  G  H F +GD+ HP    +  ML ++  +++  G+  +T     D++EEEKE
Sbjct: 675 GCSLIEANGVVHEFLAGDKTHPWINKVEGMLNEMAKRLKMEGYAPDTNEVSLDIDEEEKE 734

Query: 711 LMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRF 770
             +  HSEKLAIAFGL+   P T IRI+KNLR+C DCHTA K ISK   R IVVRD +RF
Sbjct: 735 TTLFRHSEKLAIAFGLLTISPPTPIRIMKNLRICNDCHTAAKLISKAYAREIVVRDRHRF 794

Query: 771 HHFKGGVCSCGDYW 784
           H+FK G CSC DYW
Sbjct: 795 HYFKEGACSCMDYW 808


>gi|297719939|ref|NP_001172331.1| Os01g0355000 [Oryza sativa Japonica Group]
 gi|53791352|dbj|BAD52598.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|215768699|dbj|BAH00928.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|255673214|dbj|BAH91061.1| Os01g0355000 [Oryza sativa Japonica Group]
          Length = 877

 Score =  508 bits (1308), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 276/760 (36%), Positives = 416/760 (54%), Gaps = 3/760 (0%)

Query: 26  TQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSI-PKPDLFLFNVIIRGFSN 84
            Q HA  +  GF +D+     L      F     AR +F     + +   +N ++  +  
Sbjct: 120 AQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVK 179

Query: 85  NEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLF 144
           N+    +I  +  +   + + P  F +S V++A +   +   G  +H   +  GY  D+F
Sbjct: 180 NDQCGDAIQVFGEMVW-SGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVF 238

Query: 145 VGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNG 204
              ALVD+Y K   V  A  +F+KMP+ D V WN++ISG + N     +I +   M +  
Sbjct: 239 TANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQM-KYS 297

Query: 205 GTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERA 264
           G   +  +++++L A +      LG +I    +K       Y+  GLV  Y+K   ++ A
Sbjct: 298 GLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDA 357

Query: 265 ELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPF 324
             +F  +   DLI CNA+ISG +  G+ + +L LF +L      VN +T+  ++      
Sbjct: 358 RKVFDWMFHRDLILCNALISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVLKSTASL 417

Query: 325 GHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMI 384
                T  +H+  +K G + ++ V+  L   Y + + +  A ++F+E S   + +  +MI
Sbjct: 418 EAASTTRQVHALAVKIGFIFDAHVVNGLIDSYWKCSCLSDANRVFEECSSGDIIACTSMI 477

Query: 385 AGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFE 444
              +Q    E AI LF EM    + P+P  +SS+L+ACA L A   GK VH  +  R F 
Sbjct: 478 TALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFM 537

Query: 445 SNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEM 504
           S+ +   AL+  YAKCG+I +A   F  +  +  V+W+ MI G   HGHG  AL+LF  M
Sbjct: 538 SDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRM 597

Query: 505 LHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQ 564
           +  GI P+ +T  SVL AC+HAGLV E    F SM    G     EHY+CM+D+LGRAG+
Sbjct: 598 VDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGK 657

Query: 565 LEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNI 624
           L+ A+E +  +  +   ++WGALLGA  +HKD  L ++A+EKLF L+PE  G HVLL+N 
Sbjct: 658 LDDAMELVNSMPFQANASIWGALLGASRVHKDPELGKLAAEKLFILEPEKSGTHVLLANT 717

Query: 625 YSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKL 684
           Y++   + + A VR+++K   + K P  + IEV    H F  GD+ HP +  IYA L +L
Sbjct: 718 YASAGMWNEVAKVRKLMKDSNIKKEPAMSWIEVKDKVHTFIVGDKSHPMTKEIYAKLVEL 777

Query: 685 NGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVC 744
              M +AGF       LHD++  EKEL++  HSE+LA+AF L++T PG  IR+ KNLR+C
Sbjct: 778 GDLMSKAGFVPNVDVDLHDLDRSEKELLLSHHSERLAVAFALLSTPPGAPIRVKKNLRIC 837

Query: 745 LDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
            DCH A KFISK+  R I++RD NRFHHF+ G CSCGDYW
Sbjct: 838 RDCHVAFKFISKIVSREIIIRDINRFHHFRDGTCSCGDYW 877



 Score =  235 bits (599), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 165/582 (28%), Positives = 280/582 (48%), Gaps = 17/582 (2%)

Query: 14  SLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLF 73
           +LL GA   + L ++ +   +  F+N L +      R       C AR +F  IP P   
Sbjct: 19  ALLPGAHLHASLLKSGS---LASFRNHLISFYSKCRR------PCCARRVFDEIPDPCHV 69

Query: 74  LFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGH 133
            ++ ++  +SNN +P+S+I  +  +R    +  + F    VL       D  +G  +H  
Sbjct: 70  SWSSLVTAYSNNGLPRSAIQAFHGMRAE-GVCCNEFALPVVLKCVP---DARLGAQVHAM 125

Query: 134 AIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKM-PEKDTVLWNSMISGLMKNCCFQD 192
           A+ +G+GSD+FV  ALV +Y  F ++  AR+VF++   E++ V WN ++S  +KN    D
Sbjct: 126 AMATGFGSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKNDQCGD 185

Query: 193 SIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLV 252
           +I VFG+MV + G        + V+ A    + +  G ++  + +++G+   V+    LV
Sbjct: 186 AIQVFGEMVWS-GIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALV 244

Query: 253 SFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSS 312
             Y K G V+ A ++F  +   D++S NA+ISG   NG    ++ L  Q+  S    N  
Sbjct: 245 DMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVF 304

Query: 313 TIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDES 372
           T+  ++      G   L   IH F +K+   S+  +   L  +Y++ + ++ ARK+FD  
Sbjct: 305 TLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWM 364

Query: 373 SEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGK 432
             + L   NA+I+G +  G  +EA+SLF E++   +  N  T++++L + A L A S  +
Sbjct: 365 FHRDLILCNALISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTR 424

Query: 433 WVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHG 492
            VH L     F  + +V   LID Y KC  + +A  +F+  S    +   +MI+      
Sbjct: 425 QVHALAVKIGFIFDAHVVNGLIDSYWKCSCLSDANRVFEECSSGDIIACTSMITALSQCD 484

Query: 493 HGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHY 552
           HG  A++LF EML  G+ P      S+L AC+      +G ++   +I    F   A   
Sbjct: 485 HGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQ-FMSDAFAG 543

Query: 553 ACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIH 594
             +V    + G +E A      L  E G   W A++G    H
Sbjct: 544 NALVYTYAKCGSIEDAELAFSSLP-ERGVVSWSAMIGGLAQH 584


>gi|225455746|ref|XP_002268440.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18485-like [Vitis vinifera]
          Length = 881

 Score =  508 bits (1308), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 279/760 (36%), Positives = 421/760 (55%), Gaps = 8/760 (1%)

Query: 33  IIHGFQNDLSTVTKL--AHRLSDFKATC----YARALFFSIPKPDLFLFNVIIRGFSNNE 86
           IIHG    +  V+ +   + L      C     A  +F  +P+ +L  +N II GFS N 
Sbjct: 122 IIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKVFEHMPERNLVSWNSIICGFSENG 181

Query: 87  MPKSSI-CFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFV 145
             + S   F   L    +  PD  T   VL   +   D   G+ +HG A+  G   +L V
Sbjct: 182 FLQESFNAFREMLVGEESFVPDVATLVTVLPVCAGEEDIEKGMAVHGLAVKLGLNEELMV 241

Query: 146 GAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDM-VRNG 204
             +L+D+Y K  ++  A+ +FDK  +K+ V WNSMI G  +      + ++   M   + 
Sbjct: 242 NNSLIDMYSKCRFLSEAQLLFDKNDKKNIVSWNSMIGGYAREEDVCRTFYLLQKMQTEDA 301

Query: 205 GTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERA 264
               D  ++  VLP   E  EL+   E+     + G   +  V    ++ Y++CG +  +
Sbjct: 302 KMKADEFTILNVLPVCLERSELQSLKELHGYSWRHGLQSNELVANAFIAAYTRCGALCSS 361

Query: 265 ELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPF 324
           E +F  +    + S NA++ GY  N     +L L+ Q+  S    +  TI  L+      
Sbjct: 362 ERVFDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRM 421

Query: 325 GHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMI 384
             LH    IH F L++G+  +  +  +L ++Y    +  AA+ LFD    +SL SWN MI
Sbjct: 422 KSLHYGEEIHGFALRNGLAVDPFIGISLLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMI 481

Query: 385 AGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFE 444
           AGY+QNGL +EAI+LF++M +  + P  + +  +  AC+QL A+ LGK +H      +  
Sbjct: 482 AGYSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQLSALRLGKELHCFALKAHLT 541

Query: 445 SNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEM 504
            +I+VS+++IDMYAK G I  ++ +FD +  K   +WN +I+GYG+HG G EAL+LF +M
Sbjct: 542 EDIFVSSSIIDMYAKGGCIGLSQRIFDRLREKDVASWNVIIAGYGIHGRGKEALELFEKM 601

Query: 505 LHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQ 564
           L  G++P   TF  +L ACSHAGLV +G E F  M++ H  +P  EHY C+VD+LGRAG+
Sbjct: 602 LRLGLKPDDFTFTGILMACSHAGLVEDGLEYFNQMLNLHNIEPKLEHYTCVVDMLGRAGR 661

Query: 565 LEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNI 624
           ++ AL  I+ +  +P   +W +LL +C IH +  L    + KL EL+PE    +VL+SN+
Sbjct: 662 IDDALRLIEEMPGDPDSRIWSSLLSSCRIHGNLGLGEKVANKLLELEPEKPENYVLISNL 721

Query: 625 YSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKL 684
           ++    +     VR  +K   L K  GC+ IEVGG  H F  GD++ P+   +     +L
Sbjct: 722 FAGSGKWDDVRRVRGRMKDIGLQKDAGCSWIEVGGKVHNFLIGDEMLPELEEVRETWRRL 781

Query: 685 NGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVC 744
             K+   G+  +T + LHD+EEE+K  +++ HSEKLAI+FGL+ T  G  +R+ KNLR+C
Sbjct: 782 EVKISSIGYTPDTGSVLHDLEEEDKIGILRGHSEKLAISFGLLNTAKGLPVRVYKNLRIC 841

Query: 745 LDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
            DCH A KFISKV  R IVVRD  RFHHF+ G+CSCGDYW
Sbjct: 842 GDCHNAAKFISKVVNRDIVVRDNKRFHHFRDGICSCGDYW 881



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/117 (32%), Positives = 67/117 (57%), Gaps = 4/117 (3%)

Query: 418 ILSACAQLGAISLGKWVHELVK-SRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHK 476
           +L AC Q   I +G+ +HE+V  S  F ++  ++T +I MY+ CG+  ++R +FD +  K
Sbjct: 4   LLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRRK 63

Query: 477 SEVTWNTMISGYGLHGHGLEALQLFSEMLH-SGIRPSGVTFLSVLYACSHAGLVREG 532
           +   WN ++S Y  +    +A+ +FSE++  +  +P   T   V+ AC  AGL+  G
Sbjct: 64  NLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKAC--AGLLDLG 118


>gi|125570322|gb|EAZ11837.1| hypothetical protein OsJ_01713 [Oryza sativa Japonica Group]
          Length = 877

 Score =  508 bits (1308), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 276/760 (36%), Positives = 416/760 (54%), Gaps = 3/760 (0%)

Query: 26  TQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSI-PKPDLFLFNVIIRGFSN 84
            Q HA  +  GF +D+     L      F     AR +F     + +   +N ++  +  
Sbjct: 120 AQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVK 179

Query: 85  NEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLF 144
           N+    +I  +  +   + + P  F +S V++A +   +   G  +H   +  GY  D+F
Sbjct: 180 NDQCGDAIQVFGEMVW-SGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVF 238

Query: 145 VGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNG 204
              ALVD+Y K   V  A  +F+KMP+ D V WN++ISG + N     +I +   M +  
Sbjct: 239 TANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQM-KYS 297

Query: 205 GTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERA 264
           G   +  +++++L A +      LG +I    +K       Y+  GLV  Y+K   ++ A
Sbjct: 298 GLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDA 357

Query: 265 ELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPF 324
             +F  +   DLI CNA+ISG +  G+ + +L LF +L      VN +T+  ++      
Sbjct: 358 RKVFDWMFHRDLILCNALISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVLKSTASL 417

Query: 325 GHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMI 384
                T  +H+  +K G + ++ V+  L   Y + + +  A ++F+E S   + +  +MI
Sbjct: 418 EAASTTRQVHALAVKIGFIFDAHVVNGLIDSYWKCSCLSDANRVFEECSSGDIIACTSMI 477

Query: 385 AGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFE 444
              +Q    E AI LF EM    + P+P  +SS+L+ACA L A   GK VH  +  R F 
Sbjct: 478 TALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFM 537

Query: 445 SNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEM 504
           S+ +   AL+  YAKCG+I +A   F  +  +  V+W+ MI G   HGHG  AL+LF  M
Sbjct: 538 SDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRM 597

Query: 505 LHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQ 564
           +  GI P+ +T  SVL AC+HAGLV E    F SM    G     EHY+CM+D+LGRAG+
Sbjct: 598 VDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGK 657

Query: 565 LEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNI 624
           L+ A+E +  +  +   ++WGALLGA  +HKD  L ++A+EKLF L+PE  G HVLL+N 
Sbjct: 658 LDDAMELVNSMPFQANASIWGALLGASRVHKDPELGKLAAEKLFILEPEKSGTHVLLANT 717

Query: 625 YSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKL 684
           Y++   + + A VR+++K   + K P  + IEV    H F  GD+ HP +  IYA L +L
Sbjct: 718 YASAGMWNEVAKVRKLMKDSNIKKEPAMSWIEVKDKVHTFIVGDKSHPMTKEIYAKLVEL 777

Query: 685 NGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVC 744
              M +AGF       LHD++  EKEL++  HSE+LA+AF L++T PG  IR+ KNLR+C
Sbjct: 778 GDLMSKAGFVPNVDVDLHDLDRSEKELLLSHHSERLAVAFALLSTPPGAPIRVKKNLRIC 837

Query: 745 LDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
            DCH A KFISK+  R I++RD NRFHHF+ G CSCGDYW
Sbjct: 838 RDCHVAFKFISKIVSREIIIRDINRFHHFRDGTCSCGDYW 877



 Score =  234 bits (598), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 165/582 (28%), Positives = 279/582 (47%), Gaps = 17/582 (2%)

Query: 14  SLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLF 73
           +LL GA   + L ++ +   +  F+N L +      R       C AR  F  IP P   
Sbjct: 19  ALLPGAHLHASLLKSGS---LASFRNHLISFYSKCRR------PCCARRFFDEIPDPCHV 69

Query: 74  LFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGH 133
            ++ ++  +SNN +P+S+I  +  +R    +  + F    VL       D  +G  +H  
Sbjct: 70  SWSSLVTAYSNNGLPRSAIQAFHGMRAE-GVCCNEFALPVVLKCVP---DARLGAQVHAM 125

Query: 134 AIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKM-PEKDTVLWNSMISGLMKNCCFQD 192
           A+ +G+GSD+FV  ALV +Y  F ++  AR+VF++   E++ V WN ++S  +KN    D
Sbjct: 126 AMATGFGSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKNDQCGD 185

Query: 193 SIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLV 252
           +I VFG+MV + G        + V+ A    + +  G ++  + +++G+   V+    LV
Sbjct: 186 AIQVFGEMVWS-GIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALV 244

Query: 253 SFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSS 312
             Y K G V+ A ++F  +   D++S NA+ISG   NG    ++ L  Q+  S    N  
Sbjct: 245 DMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVF 304

Query: 313 TIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDES 372
           T+  ++      G   L   IH F +K+   S+  +   L  +Y++ + ++ ARK+FD  
Sbjct: 305 TLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWM 364

Query: 373 SEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGK 432
             + L   NA+I+G +  G  +EA+SLF E++   +  N  T++++L + A L A S  +
Sbjct: 365 FHRDLILCNALISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTR 424

Query: 433 WVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHG 492
            VH L     F  + +V   LID Y KC  + +A  +F+  S    +   +MI+      
Sbjct: 425 QVHALAVKIGFIFDAHVVNGLIDSYWKCSCLSDANRVFEECSSGDIIACTSMITALSQCD 484

Query: 493 HGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHY 552
           HG  A++LF EML  G+ P      S+L AC+      +G ++   +I    F   A   
Sbjct: 485 HGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQ-FMSDAFAG 543

Query: 553 ACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIH 594
             +V    + G +E A      L  E G   W A++G    H
Sbjct: 544 NALVYTYAKCGSIEDAELAFSSLP-ERGVVSWSAMIGGLAQH 584


>gi|302761610|ref|XP_002964227.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
 gi|300167956|gb|EFJ34560.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
          Length = 736

 Score =  508 bits (1307), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 267/730 (36%), Positives = 421/730 (57%), Gaps = 9/730 (1%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           A A+F +I  P+   + +I+  F+ N   + ++ +Y  +     L PD   +   +   S
Sbjct: 11  ALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLE-GLRPDGAMFVVAIGVCS 69

Query: 120 ACCDRSIGVLLHGHAIVSGYGS-DLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWN 178
           +  D   G LLH   + +     D+ +G AL+ +Y +   ++ ARK FD+M +K  V WN
Sbjct: 70  SSKDLKQGQLLHAMILETQLLEFDIILGTALITMYARCRDLELARKTFDEMGKKTLVTWN 129

Query: 179 SMISGLMKNCCFQDSIWVFGDMVRNG--GTWLDSTSVAAVLPAVAEVQELRLGMEIQCLG 236
           ++I+G  +N   + ++ ++ DMV     G   D+ + ++ L A + V ++  G EI+   
Sbjct: 130 ALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACSVVGDISQGREIEART 189

Query: 237 LKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSL 296
           +  G+     V   L++ YSKCG +E A  +F  +   D+I+ N MISGY   G    +L
Sbjct: 190 VASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYAKQGAATQAL 249

Query: 297 RLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVY 356
            LF+++  +  + N  T +GL+        L     IH    + G  S+  +   L  +Y
Sbjct: 250 ELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVKEHGYESDLVIGNVLLNMY 309

Query: 357 SRLNE-MEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTV 415
           ++ +  +E AR++F+    + + +WN +I  Y Q G  ++A+ +F++MQ   VAPN +T+
Sbjct: 310 TKCSSSLEEARQVFERLRTRDVITWNILIVAYVQYGQAKDALDIFKQMQLENVAPNEITL 369

Query: 416 SSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSH 475
           S++LSACA LGA   GK VH L+ S   ++++ +  +L++MY +CG++ +   +F  +  
Sbjct: 370 SNVLSACAVLGAKRQGKAVHALIASGRCKADVVLENSLMNMYNRCGSLDDTVGVFAAIRD 429

Query: 476 KSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEI 535
           KS V+W+T+I+ Y  HGH    L+ F E+L  G+    VT +S L ACSH G+++EG + 
Sbjct: 430 KSLVSWSTLIAAYAQHGHSRTGLEHFWELLQEGLAADDVTMVSTLSACSHGGMLKEGVQS 489

Query: 536 FQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHK 595
           F SM+ DHG  P   H+ CMVD+L RAG+LE A   I  +   P    W +LL  C +H 
Sbjct: 490 FLSMVGDHGLAPDYRHFLCMVDLLSRAGRLEAAENLIHDMPFLPDAVAWTSLLSGCKLHN 549

Query: 596 DTNLARVASEKLFELDPENVGYHV-LLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTL 654
           DT  A   ++KLFEL+ E+    V LLSN+Y+    +     VR+   +R   K PGC+ 
Sbjct: 550 DTKRAARVADKLFELESEDEHSTVTLLSNVYAEAGRW---DDVRKTRNRRAARKNPGCSY 606

Query: 655 IEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMK 714
           IE+  T H F +GD+ HP+   I A +++L+ +M++AG+  +    LH+V+EEEKE M+ 
Sbjct: 607 IEINDTVHEFVAGDKSHPEEELIAAEIKRLSKQMKDAGYVPDMRMVLHNVKEEEKEQMLC 666

Query: 715 VHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFK 774
            HSEKLAIA+GLI+T PGT + I+KNLR C+DCH A KFIS++ GR IVVRD+ RFHHF+
Sbjct: 667 YHSEKLAIAYGLISTPPGTPLHIVKNLRACVDCHAAAKFISRIVGRKIVVRDSTRFHHFE 726

Query: 775 GGVCSCGDYW 784
            G CSC DYW
Sbjct: 727 NGSCSCKDYW 736



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 99/297 (33%), Positives = 171/297 (57%), Gaps = 5/297 (1%)

Query: 254 FYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSST 313
            Y KCG V  A  +F  I  P+ +S   +++ +  NG    +L  +R+++    R + + 
Sbjct: 1   MYGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAM 60

Query: 314 IVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVL-TALSTVYSRLNEMEAARKLFDES 372
            V  I V      L     +H+  L++ ++    +L TAL T+Y+R  ++E ARK FDE 
Sbjct: 61  FVVAIGVCSSSKDLKQGQLLHAMILETQLLEFDIILGTALITMYARCRDLELARKTFDEM 120

Query: 373 SEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASK---VAPNPVTVSSILSACAQLGAIS 429
            +K+L +WNA+IAGY++NG    A+ ++Q+M +     + P+ +T SS L AC+ +G IS
Sbjct: 121 GKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACSVVGDIS 180

Query: 430 LGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYG 489
            G+ +     +  + S+  V  ALI+MY+KCG++  AR++FD + ++  + WNTMISGY 
Sbjct: 181 QGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYA 240

Query: 490 LHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFK 546
             G   +AL+LF  M  +  +P+ VTF+ +L AC++   + +G  I +  + +HG++
Sbjct: 241 KQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRK-VKEHGYE 296



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 61/218 (27%), Positives = 113/218 (51%), Gaps = 5/218 (2%)

Query: 355 VYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVT 414
           +Y +   +  A  +F      +  SW  ++A + +NG   EA+  ++ M    + P+   
Sbjct: 1   MYGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAM 60

Query: 415 VSSILSACAQLGAISLGKWVHELV-KSRNFESNIYVSTALIDMYAKCGNIVEARELFDLM 473
               +  C+    +  G+ +H ++ +++  E +I + TALI MYA+C ++  AR+ FD M
Sbjct: 61  FVVAIGVCSSSKDLKQGQLLHAMILETQLLEFDIILGTALITMYARCRDLELARKTFDEM 120

Query: 474 SHKSEVTWNTMISGYGLHGHGLEALQLFSEMLH---SGIRPSGVTFLSVLYACSHAGLVR 530
             K+ VTWN +I+GY  +G    AL+++ +M+     G++P  +TF S LYACS  G + 
Sbjct: 121 GKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACSVVGDIS 180

Query: 531 EGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKA 568
           +G EI    +   G+   +     ++++  + G LE A
Sbjct: 181 QGREIEARTVAS-GYASDSIVQNALINMYSKCGSLESA 217


>gi|224060327|ref|XP_002300144.1| predicted protein [Populus trichocarpa]
 gi|222847402|gb|EEE84949.1| predicted protein [Populus trichocarpa]
          Length = 666

 Score =  507 bits (1306), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 258/631 (40%), Positives = 388/631 (61%), Gaps = 14/631 (2%)

Query: 164 KVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEV 223
           K FD+    D   WNS+I+ L +     +S+  F  M R      + ++    + + + +
Sbjct: 40  KYFDR---TDVYSWNSLIAELARGGDSCESLRAFSWM-RKLDIKPNRSTFPCAIKSCSAL 95

Query: 224 QELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMI 283
            +L  G +     L  GF   ++V + L+  YSKCG++  A +LF +I R ++++  ++I
Sbjct: 96  FDLNSGKQAHQQALVFGFESDLFVSSALIDMYSKCGKLSNARVLFDEIPRRNIVTWTSLI 155

Query: 284 SGYTCNGKTESSLRLFRQLL-----ASAERVNSST-IVGLIPVFYPFGHLH---LTNCIH 334
           +GY  N     +L +F++ L      + E V +S   V +I V      +    ++  +H
Sbjct: 156 TGYVQNDDAHEALMVFKEFLFEKSEGNGEEVGTSVDSVAMISVLSACSRVSNKAVSEGVH 215

Query: 335 SFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTE 394
              +K G+     V   L   Y++  E+  +RK+FD+ +EK + SWN+MIA Y QNGL+ 
Sbjct: 216 GVAIKVGLDKVMGVENTLLDAYAKCGEVSLSRKVFDDMAEKDVVSWNSMIAVYAQNGLST 275

Query: 395 EAISLFQEM-QASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTAL 453
           +A  +F  M +A     N VT+S++L ACA  GA+ +G  +H+ V    + +N+ ++T++
Sbjct: 276 DAFEVFHGMLKAGGGKYNEVTLSTLLLACAHEGALRVGMCLHDQVIKMGYVNNVIMATSI 335

Query: 454 IDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSG 513
           IDMY KCG    AR  FD M  K+  +W  MI+GYG+HG   EAL +F +M+ +G++P+ 
Sbjct: 336 IDMYCKCGQAEMARNAFDGMKEKNVRSWTAMIAGYGMHGFAREALDVFYQMIWAGVKPNY 395

Query: 514 VTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIK 573
           +TF+SVL ACSHAG + EG   F +M H++  +P  EHY CMVD+LGRAG +++A   IK
Sbjct: 396 ITFISVLAACSHAGFLEEGWRWFNAMSHEYNVEPGVEHYGCMVDLLGRAGYIKEAYNLIK 455

Query: 574 GLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQ 633
            + V     +WG+LL AC IHKD  LA +++ +LF+LDP N GY+VLL+NIY+    +  
Sbjct: 456 SMKVRRDFVLWGSLLAACRIHKDVELAEISARELFKLDPSNCGYYVLLANIYADAGRWKD 515

Query: 634 AATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGF 693
              +R +VK R L K PG +L+E+ G  HVF  GD+ HPQ   IY  LE+L+ K++EAG+
Sbjct: 516 VERMRILVKDRGLVKPPGYSLVELKGRVHVFLVGDKEHPQHEKIYKYLEELSVKLQEAGY 575

Query: 694 QTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKF 753
                + LHDV+EEEKE++++VHSEKLA+AFG++ + PG+ I +IKNLRVC DCHT  K 
Sbjct: 576 VPNMASVLHDVDEEEKEMIVRVHSEKLAVAFGVMNSIPGSTIHVIKNLRVCGDCHTVIKL 635

Query: 754 ISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           ISK+  R I+VRDA RFHHFK G+CSCGDYW
Sbjct: 636 ISKIVSREIIVRDAKRFHHFKDGLCSCGDYW 666



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 159/566 (28%), Positives = 284/566 (50%), Gaps = 34/566 (6%)

Query: 69  KPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGV 128
           + D++ +N +I   +       S+  ++ +RK   + P+  T+   + + SA  D + G 
Sbjct: 44  RTDVYSWNSLIAELARGGDSCESLRAFSWMRK-LDIKPNRSTFPCAIKSCSALFDLNSGK 102

Query: 129 LLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNC 188
             H  A+V G+ SDLFV +AL+D+Y K   + +AR +FD++P ++ V W S+I+G ++N 
Sbjct: 103 QAHQQALVFGFESDLFVSSALIDMYSKCGKLSNARVLFDEIPRRNIVTWTSLITGYVQND 162

Query: 189 CFQDSIWVFGDMV-----RNG---GTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLG 240
              +++ VF + +      NG   GT +DS ++ +VL A + V    +   +  + +K+G
Sbjct: 163 DAHEALMVFKEFLFEKSEGNGEEVGTSVDSVAMISVLSACSRVSNKAVSEGVHGVAIKVG 222

Query: 241 FHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFR 300
               + V   L+  Y+KCGEV  +  +F D+   D++S N+MI+ Y  NG +  +  +F 
Sbjct: 223 LDKVMGVENTLLDAYAKCGEVSLSRKVFDDMAEKDVVSWNSMIAVYAQNGLSTDAFEVFH 282

Query: 301 QLL-ASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRL 359
            +L A   + N  T+  L+      G L +  C+H   +K G V+N  + T++  +Y + 
Sbjct: 283 GMLKAGGGKYNEVTLSTLLLACAHEGALRVGMCLHDQVIKMGYVNNVIMATSIIDMYCKC 342

Query: 360 NEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSIL 419
            + E AR  FD   EK++ SW AMIAGY  +G   EA+ +F +M  + V PN +T  S+L
Sbjct: 343 GQAEMARNAFDGMKEKNVRSWTAMIAGYGMHGFAREALDVFYQMIWAGVKPNYITFISVL 402

Query: 420 SACAQLGAISLG-KWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSE 478
           +AC+  G +  G +W + +    N E  +     ++D+  + G I EA  L   M  + +
Sbjct: 403 AACSHAGFLEEGWRWFNAMSHEYNVEPGVEHYGCMVDLLGRAGYIKEAYNLIKSMKVRRD 462

Query: 479 -VTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGD-EIF 536
            V W ++++   +H   +E  ++ +  L   + PS   +  VL A  +A   R  D E  
Sbjct: 463 FVLWGSLLAACRIH-KDVELAEISARELFK-LDPSNCGYY-VLLANIYADAGRWKDVERM 519

Query: 537 QSMIHDHGF-KPLAEHYACMVDILGRA----------GQLEKALEFIKGLAVEPGPAVWG 585
           + ++ D G  KP       +V++ GR            Q EK  ++++ L+V+   A + 
Sbjct: 520 RILVKDRGLVKPPG---YSLVELKGRVHVFLVGDKEHPQHEKIYKYLEELSVKLQEAGYV 576

Query: 586 ALLGACMIHKDTN----LARVASEKL 607
             + + +   D      + RV SEKL
Sbjct: 577 PNMASVLHDVDEEEKEMIVRVHSEKL 602



 Score =  139 bits (350), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 120/448 (26%), Positives = 198/448 (44%), Gaps = 52/448 (11%)

Query: 27  QTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNE 86
           Q H Q ++ GF++DL   + L    S       AR LF  IP+ ++  +  +I G+  N+
Sbjct: 103 QAHQQALVFGFESDLFVSSALIDMYSKCGKLSNARVLFDEIPRRNIVTWTSLITGYVQND 162

Query: 87  MPKSSICFYTHL--------RKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSG 138
               ++  +            +    + D+     VLSA S   ++++   +HG AI  G
Sbjct: 163 DAHEALMVFKEFLFEKSEGNGEEVGTSVDSVAMISVLSACSRVSNKAVSEGVHGVAIKVG 222

Query: 139 YGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFG 198
               + V   L+D Y K   V  +RKVFD M EKD V WNSMI+   +N    D+  VF 
Sbjct: 223 LDKVMGVENTLLDAYAKCGEVSLSRKVFDDMAEKDVVSWNSMIAVYAQNGLSTDAFEVFH 282

Query: 199 DMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKC 258
            M++ GG   +  +++ +L A A    LR+GM +    +K+G+ ++V + T ++  Y KC
Sbjct: 283 GMLKAGGGKYNEVTLSTLLLACAHEGALRVGMCLHDQVIKMGYVNNVIMATSIIDMYCKC 342

Query: 259 GEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLI 318
           G+ E A   F  +   ++ S  AMI+GY  +G    +L +F Q++ +  + N  T + + 
Sbjct: 343 GQAEMARNAFDGMKEKNVRSWTAMIAGYGMHGFAREALDVFYQMIWAGVKPNYITFISV- 401

Query: 319 PVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLA 378
                     L  C H+  L+ G              +   N M       + + E  + 
Sbjct: 402 ----------LAACSHAGFLEEG--------------WRWFNAMS-----HEYNVEPGVE 432

Query: 379 SWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSAC-----AQLGAISLGKW 433
            +  M+    + G  +EA +L + M   KV  + V   S+L+AC      +L  IS    
Sbjct: 433 HYGCMVDLLGRAGYIKEAYNLIKSM---KVRRDFVLWGSLLAACRIHKDVELAEIS---- 485

Query: 434 VHELVKSRNFESNIYVSTALIDMYAKCG 461
             EL K        YV   L ++YA  G
Sbjct: 486 ARELFKLDPSNCGYYV--LLANIYADAG 511


>gi|15227619|ref|NP_180537.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75100656|sp|O82380.1|PP175_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At2g29760, chloroplastic; Flags: Precursor
 gi|3582328|gb|AAC35225.1| hypothetical protein [Arabidopsis thaliana]
 gi|330253207|gb|AEC08301.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 738

 Score =  507 bits (1306), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 258/689 (37%), Positives = 400/689 (58%), Gaps = 35/689 (5%)

Query: 131 HGHAIVSGYGSDLFVGAALVDL--YFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNC 188
           HGH I +G  SD +  + L  +     F+ ++ ARKVFD++P+ ++  WN++I       
Sbjct: 50  HGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYASGP 109

Query: 189 CFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVL 248
               SIW F DMV     + +  +   ++ A AEV  L LG  +  + +K      V+V 
Sbjct: 110 DPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVA 169

Query: 249 TGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAER 308
             L+  Y  CG+++ A  +F  I   D++S N+MI+G+   G  + +L LF+++ +   +
Sbjct: 170 NSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVK 229

Query: 309 VNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKL 368
            +  T+VG++       +L     + S+  ++ +  N ++  A+  +Y++   +E A++L
Sbjct: 230 ASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRL 289

Query: 369 FDESSEKS-------------------------------LASWNAMIAGYTQNGLTEEAI 397
           FD   EK                                + +WNA+I+ Y QNG   EA+
Sbjct: 290 FDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEAL 349

Query: 398 SLFQEMQASK-VAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDM 456
            +F E+Q  K +  N +T+ S LSACAQ+GA+ LG+W+H  +K      N +V++ALI M
Sbjct: 350 IVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHM 409

Query: 457 YAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTF 516
           Y+KCG++ ++RE+F+ +  +    W+ MI G  +HG G EA+ +F +M  + ++P+GVTF
Sbjct: 410 YSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTF 469

Query: 517 LSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLA 576
            +V  ACSH GLV E + +F  M  ++G  P  +HYAC+VD+LGR+G LEKA++FI+ + 
Sbjct: 470 TNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMP 529

Query: 577 VEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAAT 636
           + P  +VWGALLGAC IH + NLA +A  +L EL+P N G HVLLSNIY+    +   + 
Sbjct: 530 IPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSE 589

Query: 637 VRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTE 696
           +R+ ++   L K PGC+ IE+ G  H F SGD  HP S  +Y  L ++  K++  G++ E
Sbjct: 590 LRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVMEKLKSNGYEPE 649

Query: 697 TVTALHDVEEEE-KELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFIS 755
               L  +EEEE KE  + +HSEKLAI +GLI+TE    IR+IKNLRVC DCH+  K IS
Sbjct: 650 ISQVLQIIEEEEMKEQSLNLHSEKLAICYGLISTEAPKVIRVIKNLRVCGDCHSVAKLIS 709

Query: 756 KVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           ++  R I+VRD  RFHHF+ G CSC D+W
Sbjct: 710 QLYDREIIVRDRYRFHHFRNGQCSCNDFW 738



 Score =  220 bits (560), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 153/555 (27%), Positives = 269/555 (48%), Gaps = 38/555 (6%)

Query: 5   TPQSRNLFLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKL--AHRLSDFKATCYARA 62
           T   R+  +SL++   +  QL QTH  +I  G  +D  + +KL     LS F +  YAR 
Sbjct: 26  TNNERSRHISLIERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARK 85

Query: 63  LFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACC 122
           +F  IPKP+ F +N +IR +++   P  SI  +  +   +   P+ +T+ F++ AA+   
Sbjct: 86  VFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVS 145

Query: 123 DRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMIS 182
             S+G  LHG A+ S  GSD+FV  +L+  YF    + SA KVF  + EKD V WNSMI+
Sbjct: 146 SLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMIN 205

Query: 183 GLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFH 242
           G ++      ++ +F  M  +        ++  VL A A+++ L  G ++     +   +
Sbjct: 206 GFVQKGSPDKALELFKKM-ESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVN 264

Query: 243 DHVYVLTGLVSFYSKCGEVERAELLF---------------------------RDIV--- 272
            ++ +   ++  Y+KCG +E A+ LF                           R+++   
Sbjct: 265 VNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSM 324

Query: 273 -RPDLISCNAMISGYTCNGKTESSLRLFRQL-LASAERVNSSTIVGLIPVFYPFGHLHLT 330
            + D+++ NA+IS Y  NGK   +L +F +L L    ++N  T+V  +      G L L 
Sbjct: 325 PQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELG 384

Query: 331 NCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQN 390
             IHS+  K GI  N  V +AL  +YS+  ++E +R++F+   ++ +  W+AMI G   +
Sbjct: 385 RWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMH 444

Query: 391 GLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWV-HELVKSRNFESNIYV 449
           G   EA+ +F +MQ + V PN VT +++  AC+  G +   + + H++  +         
Sbjct: 445 GCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKH 504

Query: 450 STALIDMYAKCGNIVEARELFDLMS-HKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSG 508
              ++D+  + G + +A +  + M    S   W  ++    +H +   A    + +L   
Sbjct: 505 YACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELE 564

Query: 509 IRPSGV-TFLSVLYA 522
            R  G    LS +YA
Sbjct: 565 PRNDGAHVLLSNIYA 579


>gi|224124386|ref|XP_002330010.1| predicted protein [Populus trichocarpa]
 gi|222871435|gb|EEF08566.1| predicted protein [Populus trichocarpa]
          Length = 677

 Score =  507 bits (1306), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 256/622 (41%), Positives = 376/622 (60%), Gaps = 35/622 (5%)

Query: 163 RKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAE 222
           R +FD++ +K+ V +N MI   + N  +QD++ VF  M  N G + D+ +   VL A + 
Sbjct: 91  RHIFDEITDKNVVFFNVMIRSYVNNGLYQDALLVFKTMA-NQGFYPDNYTYPCVLKACSV 149

Query: 223 VQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAM 282
              L +G++I    +KLG   ++Y+  GLVS Y KC  ++ A  +  ++   D++S N+M
Sbjct: 150 SGNLWVGLQIHGAVVKLGLDMNLYIGNGLVSMYGKCKWLDAARRVLDEMPGRDMVSWNSM 209

Query: 283 ISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGI 342
           ++GY  NG+   +L+L R++     + ++ T+  L+P                       
Sbjct: 210 VAGYAQNGRFNDALKLCREMEDLKLKPDAGTMGSLLPA---------------------- 247

Query: 343 VSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQE 402
           V+N+S    L             + +F +  EKSL SWN MIA Y  N +  EA+ L+ +
Sbjct: 248 VTNTSCDNVLYV-----------KDMFVKLKEKSLISWNVMIAVYVNNAMPNEAVDLYLQ 296

Query: 403 MQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGN 462
           MQ   V P+ V++SS+L AC  L A  LG+ +HE V+ +    N+ +  ALIDMYAKCG 
Sbjct: 297 MQVHGVEPDAVSISSVLPACGDLSAAVLGRRIHEYVERKKLRPNLLLENALIDMYAKCGC 356

Query: 463 IVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYA 522
           + EAR +FD M  +  V+W +MIS YG+ G G +A+ LF +M  SG  P  + F+SVL A
Sbjct: 357 LKEARAVFDQMMFRDVVSWTSMISAYGMSGQGKDAVALFKKMRDSGFTPDWIAFVSVLAA 416

Query: 523 CSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPA 582
           CSHAGLV EG   F +++ ++G  P  EHY CMVD+LGRAG++++A    + + +EP   
Sbjct: 417 CSHAGLVDEGRYCF-NLMAEYGITPGIEHYNCMVDLLGRAGKIDEAYHLTRQMPMEPNER 475

Query: 583 VWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVK 642
           VWG+LL AC ++   N+A +A++ LF+L PE  GY+VLLSNIY+    +    TVR ++ 
Sbjct: 476 VWGSLLSACRVYSSMNIALLAADHLFQLAPEQSGYYVLLSNIYAKAGRWQDVETVRSIMN 535

Query: 643 KRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALH 702
            + + K PG + +E+    + F +GDQ H QS  IY  L  L G+M+E G+  ET +ALH
Sbjct: 536 SKGIKKIPGNSNVEINDHVYTFLAGDQSHTQSKEIYKALGVLVGRMKELGYMPETDSALH 595

Query: 703 DVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVI 762
           DVEEE+KE  + VHSEKLAI F ++ T+PG+ IRI KN+RVC DCH ATK ISK+  R I
Sbjct: 596 DVEEEDKECHLAVHSEKLAIVFAILNTKPGSTIRITKNIRVCGDCHVATKLISKIAEREI 655

Query: 763 VVRDANRFHHFKGGVCSCGDYW 784
           ++RD +RFHHF+ GVCSCGDYW
Sbjct: 656 IIRDTHRFHHFRDGVCSCGDYW 677



 Score =  189 bits (479), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 137/542 (25%), Positives = 248/542 (45%), Gaps = 44/542 (8%)

Query: 10  NLFLSLLKGAKTQSQLTQTHAQIII-HGFQNDLSTVTKLAHRLSDFKATCYARALFFSIP 68
           N  L +   AKT   L + H++I+I      + S   KL    +     CY R +F  I 
Sbjct: 42  NKILDVNPDAKT---LKKLHSKILIDQNLHPNPSLGIKLMRAYAACGEPCYTRHIFDEIT 98

Query: 69  KPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGV 128
             ++  FNV+IR + NN + + ++  +  +  N    PDN+TY  VL A S   +  +G+
Sbjct: 99  DKNVVFFNVMIRSYVNNGLYQDALLVFKTM-ANQGFYPDNYTYPCVLKACSVSGNLWVGL 157

Query: 129 LLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNC 188
            +HG  +  G   +L++G  LV +Y K  W+ +AR+V D+MP +D V WNSM++G  +N 
Sbjct: 158 QIHGAVVKLGLDMNLYIGNGLVSMYGKCKWLDAARRVLDEMPGRDMVSWNSMVAGYAQNG 217

Query: 189 CFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVL 248
            F D++ +  +M  +     D+ ++ ++LPAV                            
Sbjct: 218 RFNDALKLCREM-EDLKLKPDAGTMGSLLPAVTN-------------------------- 250

Query: 249 TGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAER 308
                  + C  V   + +F  +    LIS N MI+ Y  N     ++ L+ Q+      
Sbjct: 251 -------TSCDNVLYVKDMFVKLKEKSLISWNVMIAVYVNNAMPNEAVDLYLQMQVHGVE 303

Query: 309 VNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKL 368
            ++ +I  ++P         L   IH +  +  +  N  +  AL  +Y++   ++ AR +
Sbjct: 304 PDAVSISSVLPACGDLSAAVLGRRIHEYVERKKLRPNLLLENALIDMYAKCGCLKEARAV 363

Query: 369 FDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAI 428
           FD+   + + SW +MI+ Y  +G  ++A++LF++M+ S   P+ +   S+L+AC+  G +
Sbjct: 364 FDQMMFRDVVSWTSMISAYGMSGQGKDAVALFKKMRDSGFTPDWIAFVSVLAACSHAGLV 423

Query: 429 SLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMS-HKSEVTWNTMISG 487
             G++   L+        I     ++D+  + G I EA  L   M    +E  W +++S 
Sbjct: 424 DEGRYCFNLMAEYGITPGIEHYNCMVDLLGRAGKIDEAYHLTRQMPMEPNERVWGSLLSA 483

Query: 488 YGLHGHGLEALQLFSEMLHSGIRPSG-VTFLSVLYACSHAGLVREGDEIFQSMIHDHGFK 546
             ++     AL     +       SG    LS +YA   AG  ++  E  +S+++  G K
Sbjct: 484 CRVYSSMNIALLAADHLFQLAPEQSGYYVLLSNIYA--KAGRWQDV-ETVRSIMNSKGIK 540

Query: 547 PL 548
            +
Sbjct: 541 KI 542


>gi|359472776|ref|XP_002275546.2| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Vitis vinifera]
          Length = 896

 Score =  507 bits (1306), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 280/705 (39%), Positives = 405/705 (57%), Gaps = 34/705 (4%)

Query: 112 SFVL-SAASACCDRSI------GVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARK 164
           SF L S A AC +  +      G  LHG+++  G     F   AL+ +Y K   V  ++ 
Sbjct: 194 SFTLVSVALACSNLGVMHGLRLGKQLHGYSLRVG-DQKTFTNNALMAMYAKLGRVDDSKA 252

Query: 165 VFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQ 224
           +F+   ++D V WN+MIS   ++  F +++  F  MV  G   LD  ++A+VLPA + ++
Sbjct: 253 LFESFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEG-VELDGVTIASVLPACSHLE 311

Query: 225 ELRLGMEIQCLGLKLG-FHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMI 283
            L +G EI    L+     ++ +V + LV  Y  C +VE    +F  I+   +   NAMI
Sbjct: 312 RLDVGKEIHAYVLRNNDLIENSFVGSALVDMYCNCRQVESGRRVFDHILGRRIELWNAMI 371

Query: 284 SGYTCNGKTESSLRLFRQLLASAERV-NSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGI 342
           SGY  NG  E +L LF +++  A  + N++T+  ++P             IH + +K G 
Sbjct: 372 SGYARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHCEAFSNKESIHGYAVKLGF 431

Query: 343 VSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQE 402
             +  V  AL  +YSR+ +M+ +  +FD    +   SWN MI GY  +G    A+ L  E
Sbjct: 432 KEDRYVQNALMDMYSRMGKMDISETIFDSMEVRDRVSWNTMITGYVLSGRYSNALVLLHE 491

Query: 403 MQ-----------------ASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFES 445
           MQ                      PN +T+ ++L  CA L AI+ GK +H         S
Sbjct: 492 MQRMENTKDVKKDDNDDEKGGPYKPNAITLMTVLPGCAALAAIAKGKEIHAYAIRNMLAS 551

Query: 446 NIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEML 505
           +I V +AL+DMYAKCG +  +R +F+ M +K+ +TWN +I   G+HG G EAL+LF  M+
Sbjct: 552 DITVGSALVDMYAKCGCLNLSRRVFNEMPNKNVITWNVLIMACGMHGKGEEALELFKNMV 611

Query: 506 HSGIR-----PSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILG 560
               R     P+ VTF++V  ACSH+GL+ EG  +F  M HDHG +P ++HYAC+VD+LG
Sbjct: 612 AEAGRGGEAKPNEVTFITVFAACSHSGLISEGLNLFYRMKHDHGVEPTSDHYACVVDLLG 671

Query: 561 RAGQLEKALEFIKGLAVE-PGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHV 619
           RAGQLE+A E +  +  E      W +LLGAC IH++  L  VA++ L  L+P    ++V
Sbjct: 672 RAGQLEEAYELVNTMPAEFDKVGAWSSLLGACRIHQNVELGEVAAKNLLHLEPNVASHYV 731

Query: 620 LLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYA 679
           LLSNIYS+   + +A  VR+ +++  + K PGC+ IE     H F +GD  HPQS  ++ 
Sbjct: 732 LLSNIYSSAGLWNKAMEVRKNMRQMGVKKEPGCSWIEFRDEVHKFMAGDVSHPQSEQLHG 791

Query: 680 MLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIK 739
            LE L+ KMR+ G+  +T   LH+V+E+EKE ++  HSEKLAIAFG++ T PGT IR+ K
Sbjct: 792 FLETLSEKMRKEGYVPDTSCVLHNVDEDEKENLLCGHSEKLAIAFGILNTPPGTTIRVAK 851

Query: 740 NLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           NLRVC DCH ATKFISK+  R I+VRD  RFHHFK G CSCGDYW
Sbjct: 852 NLRVCNDCHAATKFISKIMEREIIVRDVRRFHHFKEGTCSCGDYW 896



 Score =  224 bits (571), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 151/513 (29%), Positives = 251/513 (48%), Gaps = 29/513 (5%)

Query: 106 PDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSD-LFVGAALVDLYFKFSWVKSARK 164
           PDNF +  VL A S   D   G  +H  A+  GYGS  + V   LV++Y K   +    K
Sbjct: 90  PDNFAFPAVLKAVSGLQDLKTGEQIHAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDVCK 149

Query: 165 VFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDST--SVAAVLPAVAE 222
           VFD++ ++D V WNS I+ L +   ++ ++  F  M          T  SVA     +  
Sbjct: 150 VFDRITDRDQVSWNSFIAALCRFEKWEQALEAFRAMQMENMELSSFTLVSVALACSNLGV 209

Query: 223 VQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAM 282
           +  LRLG ++    L++G     +    L++ Y+K G V+ ++ LF   V  D++S N M
Sbjct: 210 MHGLRLGKQLHGYSLRVG-DQKTFTNNALMAMYAKLGRVDDSKALFESFVDRDMVSWNTM 268

Query: 283 ISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSG- 341
           IS ++ + +   +L  FR ++     ++  TI  ++P       L +   IH++ L++  
Sbjct: 269 ISSFSQSDRFSEALAFFRLMVLEGVELDGVTIASVLPACSHLERLDVGKEIHAYVLRNND 328

Query: 342 IVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQ 401
           ++ NS V +AL  +Y    ++E+ R++FD    + +  WNAMI+GY +NGL E+A+ LF 
Sbjct: 329 LIENSFVGSALVDMYCNCRQVESGRRVFDHILGRRIELWNAMISGYARNGLDEKALILFI 388

Query: 402 EM-QASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKC 460
           EM + + + PN  T++S++ AC    A S  + +H       F+ + YV  AL+DMY++ 
Sbjct: 389 EMIKVAGLLPNTTTMASVMPACVHCEAFSNKESIHGYAVKLGFKEDRYVQNALMDMYSRM 448

Query: 461 GNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLH-------------- 506
           G +  +  +FD M  +  V+WNTMI+GY L G    AL L  EM                
Sbjct: 449 GKMDISETIFDSMEVRDRVSWNTMITGYVLSGRYSNALVLLHEMQRMENTKDVKKDDNDD 508

Query: 507 ---SGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAG 563
                 +P+ +T ++VL  C+    + +G EI    I +     +    A +VD+  + G
Sbjct: 509 EKGGPYKPNAITLMTVLPGCAALAAIAKGKEIHAYAIRNMLASDITVGSA-LVDMYAKCG 567

Query: 564 QLEKALEFIKGLAVEPGPAV--WGALLGACMIH 594
            L  +      +   P   V  W  L+ AC +H
Sbjct: 568 CLNLSRRVFNEM---PNKNVITWNVLIMACGMH 597



 Score =  113 bits (282), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 111/455 (24%), Positives = 193/455 (42%), Gaps = 66/455 (14%)

Query: 34  IHGF---QNDLSTVTKLAHRLSDFKATCY----ARALFFSIPKPDLFLFNVIIRGFSNNE 86
           IH +    NDL   + +   L D    C      R +F  I    + L+N +I G++ N 
Sbjct: 319 IHAYVLRNNDLIENSFVGSALVDMYCNCRQVESGRRVFDHILGRRIELWNAMISGYARNG 378

Query: 87  MPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVG 146
           + + ++  +  + K   L P+  T + V+ A   C   S    +HG+A+  G+  D +V 
Sbjct: 379 LDEKALILFIEMIKVAGLLPNTTTMASVMPACVHCEAFSNKESIHGYAVKLGFKEDRYVQ 438

Query: 147 AALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVR---- 202
            AL+D+Y +   +  +  +FD M  +D V WN+MI+G + +  + +++ +  +M R    
Sbjct: 439 NALMDMYSRMGKMDISETIFDSMEVRDRVSWNTMITGYVLSGRYSNALVLLHEMQRMENT 498

Query: 203 -----------NGGTWL-DSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTG 250
                       GG +  ++ ++  VLP  A +  +  G EI    ++      + V + 
Sbjct: 499 KDVKKDDNDDEKGGPYKPNAITLMTVLPGCAALAAIAKGKEIHAYAIRNMLASDITVGSA 558

Query: 251 LVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVN 310
           LV  Y+KCG +  +  +F ++   ++I+ N +I     +GK E +L LF+ ++A A R  
Sbjct: 559 LVDMYAKCGCLNLSRRVFNEMPNKNVITWNVLIMACGMHGKGEEALELFKNMVAEAGRGG 618

Query: 311 SSTI--VGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKL 368
            +    V  I VF             + C  SG++S       L+  Y         R  
Sbjct: 619 EAKPNEVTFITVF-------------AACSHSGLISE-----GLNLFY---------RMK 651

Query: 369 FDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQA--SKVAPNPVTVSSILSAC---- 422
            D   E +   +  ++    + G  EEA  L   M A   KV       SS+L AC    
Sbjct: 652 HDHGVEPTSDHYACVVDLLGRAGQLEEAYELVNTMPAEFDKVG----AWSSLLGACRIHQ 707

Query: 423 -AQLGAISLGKWVH---ELVKSRNFESNIYVSTAL 453
             +LG ++    +H    +       SNIY S  L
Sbjct: 708 NVELGEVAAKNLLHLEPNVASHYVLLSNIYSSAGL 742



 Score = 80.1 bits (196), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 48/159 (30%), Positives = 82/159 (51%), Gaps = 1/159 (0%)

Query: 372 SSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLG 431
           S  +S ASW   +   T++    EAIS + EM  S   P+     ++L A + L  +  G
Sbjct: 52  SPSRSTASWVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTG 111

Query: 432 KWVHEL-VKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGL 490
           + +H   VK     S++ V+  L++MY KCG I +  ++FD ++ + +V+WN+ I+    
Sbjct: 112 EQIHAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDVCKVFDRITDRDQVSWNSFIAALCR 171

Query: 491 HGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLV 529
                +AL+ F  M    +  S  T +SV  ACS+ G++
Sbjct: 172 FEKWEQALEAFRAMQMENMELSSFTLVSVALACSNLGVM 210


>gi|168003497|ref|XP_001754449.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162694551|gb|EDQ80899.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 723

 Score =  507 bits (1306), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 263/689 (38%), Positives = 399/689 (57%), Gaps = 6/689 (0%)

Query: 101 NTALTPDNFTYSFVLSAASACCDR----SIGVLLHGHAIVSGYGSDLFVGAALVDLYFKF 156
           NT +      YS V       C R      G  +H   + SG   + ++   L+ +Y K 
Sbjct: 36  NTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAILKSGIQPNRYLENTLLSMYAKC 95

Query: 157 SWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAV 216
             +  AR+VFD + +++ V W +MI   +      ++   +  M +  G   D  +  ++
Sbjct: 96  GSLTDARRVFDSIRDRNIVSWTAMIEAFVAGNKNLEAFKCYETM-KLAGCKPDKVTFVSL 154

Query: 217 LPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDL 276
           L A    + L+LG ++    ++ G      V T LV  Y+KCG++ +A ++F  +   ++
Sbjct: 155 LNAFTNPELLQLGQKVHMEIVEAGLELEPRVGTSLVGMYAKCGDISKARVIFDRLPEKNV 214

Query: 277 ISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSF 336
           ++   +I+GY   G+ + +L L   +  +    N  T   ++        L     +H +
Sbjct: 215 VTWTLLIAGYAQQGQVDVALELLETMQQAEVAPNKITFASILQGCTTPAALEHGKKVHRY 274

Query: 337 CLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEA 396
            ++SG      V+ +L T+Y +   +E ARKLF +   + + +W AM+ GY Q G  +EA
Sbjct: 275 IIQSGYGRELWVVNSLITMYCKCGGLEEARKLFSDLPHRDVVTWTAMVTGYAQLGFHDEA 334

Query: 397 ISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDM 456
           I+LF+ MQ   + P+ +T +S+L++C+    +  GK +H+ +    +  ++Y+ +AL+ M
Sbjct: 335 INLFRRMQQQGIKPDKMTFTSVLTSCSSPAFLQEGKRIHQQLVHAGYNLDVYLQSALVSM 394

Query: 457 YAKCGNIVEARELFDLMSHKSEVTWNTMISGY-GLHGHGLEALQLFSEMLHSGIRPSGVT 515
           YAKCG++ +A  +F+ MS ++ V W  +I+G    HG   EAL+ F +M   GI+P  VT
Sbjct: 395 YAKCGSMDDASLVFNQMSERNVVAWTAIITGCCAQHGRCREALEYFDQMKKQGIKPDKVT 454

Query: 516 FLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGL 575
           F SVL AC+H GLV EG + F+SM  D+G KP+ EHY+C VD+LGRAG LE+A   I  +
Sbjct: 455 FTSVLSACTHVGLVEEGRKHFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEAENVILSM 514

Query: 576 AVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAA 635
              PGP+VWGALL AC +H D      A+E + +LDP++ G +V LS+IY+A   Y  A 
Sbjct: 515 PFIPGPSVWGALLSACRVHSDVERGERAAENVLKLDPDDDGAYVALSSIYAAAGRYEDAE 574

Query: 636 TVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQT 695
            VRQV++KR + K PG + IEV G  HVF   D+ HP+S  IY  L KL  +++E G+  
Sbjct: 575 KVRQVMEKRDVVKEPGQSWIEVDGKVHVFHVEDKSHPESEQIYVELGKLTEQIKEMGYVP 634

Query: 696 ETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFIS 755
           +T   LHDV+EE+KE ++  HSE+LAI +GL+ T PG  IRI+KNLRVC DCHTATKFIS
Sbjct: 635 DTRFVLHDVDEEQKERILFSHSERLAITYGLMKTPPGMPIRIVKNLRVCGDCHTATKFIS 694

Query: 756 KVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           KV GR I+ RDA RFHHF  GVCSCGD+W
Sbjct: 695 KVVGREIIARDAQRFHHFADGVCSCGDFW 723


>gi|449455978|ref|XP_004145727.1| PREDICTED: uncharacterized protein LOC101212001 [Cucumis sativus]
          Length = 2598

 Score =  507 bits (1305), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 256/617 (41%), Positives = 378/617 (61%), Gaps = 10/617 (1%)

Query: 177  WNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLG 236
            WNS+I+ L +     +++  F  + R  G     +S    + + + + +L  G       
Sbjct: 1983 WNSVIADLARGGDSVEALRAFSSL-RKLGLIPTRSSFPCTIKSCSALCDLVSGRMSHQQA 2041

Query: 237  LKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSL 296
               GF   ++V + L+  YSKCG+++ A  LF +I   +++S  +MI+GY  N + +++L
Sbjct: 2042 FVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQNEQADNAL 2101

Query: 297  RLFRQLLASAERV--------NSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSV 348
             LF+  L     V        +S  +V ++          +T  +H F +K G   +  V
Sbjct: 2102 LLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGFDGSIGV 2161

Query: 349  LTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEM-QASK 407
               L   Y++  +   ++K+FD   EK   SWN+MIA Y Q+GL+ EA+ +F  M +   
Sbjct: 2162 GNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHGMVRHVG 2221

Query: 408  VAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEAR 467
            V  N VT+S++L ACA  GA+  GK +H+ V   + E N+ V T++IDMY KCG +  A+
Sbjct: 2222 VRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRVEMAK 2281

Query: 468  ELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAG 527
            + FD M  K+  +W  M++GYG+HG   EAL +F +M+ +G++P+ +TF+SVL ACSHAG
Sbjct: 2282 KTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLAACSHAG 2341

Query: 528  LVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGAL 587
            LV EG   F +M H +  +P  EHY CMVD+ GRAG L +A   IK + ++P   VWG+L
Sbjct: 2342 LVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYNLIKRMKMKPDFVVWGSL 2401

Query: 588  LGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLA 647
            LGAC IHK+ +L  +A++KLFELDP+N GY+VLLSN+Y+    +     +R ++K R+L 
Sbjct: 2402 LGACRIHKNVDLGEIAAQKLFELDPDNCGYYVLLSNLYADAGRWADVERMRMLMKNRQLV 2461

Query: 648  KAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEE 707
            K PG +L+E+ G  HVF  GD+ HP    IY  LEKL  ++++ G+     + LHDV+EE
Sbjct: 2462 KPPGFSLVELKGRVHVFLVGDKEHPHHEMIYKYLEKLTLELQKIGYVPNMTSVLHDVDEE 2521

Query: 708  EKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDA 767
            EKE++++VHSEKLA+AFG++ + PGT I IIKNLRVC DCHT  K ISK+  R  VVRD+
Sbjct: 2522 EKEIILRVHSEKLAVAFGVMNSAPGTTINIIKNLRVCGDCHTVIKLISKLVHRDFVVRDS 2581

Query: 768  NRFHHFKGGVCSCGDYW 784
             RFHHFK GVCSCGDYW
Sbjct: 2582 KRFHHFKDGVCSCGDYW 2598



 Score =  223 bits (567), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 125/374 (33%), Positives = 194/374 (51%), Gaps = 31/374 (8%)

Query: 231 EIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNG 290
           +I    ++ G  +   +   L+  YS  G +  A LLF  I  P   + N +I   T NG
Sbjct: 45  QIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTING 104

Query: 291 KTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGI-----VSN 345
            +E +L L++ ++      +  T   +I     F  + L   +H   +K G      V N
Sbjct: 105 LSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQN 164

Query: 346 SSV-----------------------LTALSTVYSRL---NEMEAARKLFDESSEKSLAS 379
           + +                       + + +TV S L    +++ AR++FDE   K++ S
Sbjct: 165 NLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVVS 224

Query: 380 WNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVK 439
           W AMI GY +N   EEA+ LF+ MQA  + PN  T+ S++ AC ++G ++LG+ +H+   
Sbjct: 225 WTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYAI 284

Query: 440 SRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQ 499
               E  +Y+ TALIDMY+KCG+I +A E+F+ M  KS  TWN+MI+  G+HG G EAL 
Sbjct: 285 KNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEALN 344

Query: 500 LFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDIL 559
           LFSEM    ++P  +TF+ VL AC H   V+EG   F  M   +G  P+ EHY CM ++ 
Sbjct: 345 LFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQHYGIAPIPEHYECMTELY 404

Query: 560 GRAGQLEKALEFIK 573
            R+  L++A +  K
Sbjct: 405 ARSNNLDEAFKSTK 418



 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 125/435 (28%), Positives = 221/435 (50%), Gaps = 11/435 (2%)

Query: 67   IPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSI 126
            + K ++  +N +I   +       ++  ++ LRK   L P   ++   + + SA CD   
Sbjct: 1975 VDKSNVHSWNSVIADLARGGDSVEALRAFSSLRK-LGLIPTRSSFPCTIKSCSALCDLVS 2033

Query: 127  GVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMK 186
            G + H  A V G+ +DLFV +AL+D+Y K   +K AR +FD++P ++ V W SMI+G ++
Sbjct: 2034 GRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQ 2093

Query: 187  NCCFQDSIWVFGDM------VRNGGTW-LDSTSVAAVLPAVAEVQELRLGMEIQCLGLKL 239
            N    +++ +F D       V +G    LDS  + +VL A + V    +   +    +K 
Sbjct: 2094 NEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKK 2153

Query: 240  GFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLF 299
            GF   + V   L+  Y+KCG+   ++ +F  +   D IS N+MI+ Y  +G +  +L +F
Sbjct: 2154 GFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVF 2213

Query: 300  RQLLAS-AERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSR 358
              ++     R N+ T+  ++      G L    CIH   +K  +  N  V T++  +Y +
Sbjct: 2214 HGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCK 2273

Query: 359  LNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSI 418
               +E A+K FD   EK++ SW AM+AGY  +G  +EA+ +F +M  + V PN +T  S+
Sbjct: 2274 CGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSV 2333

Query: 419  LSACAQLGAISLG-KWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKS 477
            L+AC+  G +  G  W + +    + E  I     ++D++ + G + EA  L   M  K 
Sbjct: 2334 LAACSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYNLIKRMKMKP 2393

Query: 478  E-VTWNTMISGYGLH 491
            + V W +++    +H
Sbjct: 2394 DFVVWGSLLGACRIH 2408



 Score =  142 bits (357), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 120/462 (25%), Positives = 204/462 (44%), Gaps = 47/462 (10%)

Query: 28   THAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNEM 87
            +H Q  + GF+ DL   + L    S       ARALF  IP  ++  +  +I G+  NE 
Sbjct: 2037 SHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQNEQ 2096

Query: 88   PKSSICFY-------THLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYG 140
              +++  +       T +     +  D+     VLSA S    + I   +HG  +  G+ 
Sbjct: 2097 ADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGFD 2156

Query: 141  SDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDM 200
              + VG  L+D Y K      ++KVFD M EKD + WNSMI+   ++    +++ VF  M
Sbjct: 2157 GSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHGM 2216

Query: 201  VRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGE 260
            VR+ G   ++ +++AVL A A    LR G  I    +K+    +V V T ++  Y KCG 
Sbjct: 2217 VRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGR 2276

Query: 261  VERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPV 320
            VE A+  F  +   ++ S  AM++GY  +G+ + +L +F +++ +  + N  T V +   
Sbjct: 2277 VEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSV--- 2333

Query: 321  FYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASW 380
                    L  C H+  ++ G              +   N M+    +     E  +  +
Sbjct: 2334 --------LAACSHAGLVEEG--------------WHWFNAMKHKYDI-----EPGIEHY 2366

Query: 381  NAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKS 440
              M+  + + G   EA +L + M   K+ P+ V   S+L AC     + LG    E+   
Sbjct: 2367 GCMVDLFGRAGCLNEAYNLIKRM---KMKPDFVVWGSLLGACRIHKNVDLG----EIAAQ 2419

Query: 441  RNFE---SNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEV 479
            + FE    N      L ++YA  G   +   +  LM ++  V
Sbjct: 2420 KLFELDPDNCGYYVLLSNLYADAGRWADVERMRMLMKNRQLV 2461



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 105/398 (26%), Positives = 180/398 (45%), Gaps = 56/398 (14%)

Query: 13  LSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDL 72
           L LL+  K    L Q HA+II  G  ND     KL H  S      YA  LF+ I  P  
Sbjct: 31  LFLLQNCKNFKHLRQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCT 90

Query: 73  FLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHG 132
           F +N+IIR  + N + + ++  Y ++     +  D FT+ FV+ A +      +G ++HG
Sbjct: 91  FTWNLIIRANTINGLSEQALMLYKNM-VCQGIAADKFTFPFVIKACTNFLSIDLGKVVHG 149

Query: 133 HAIVSGYGSDLFVGAALVDLYFK-------------------FSW------------VKS 161
             I  G+  D+FV   L+D YFK                    SW            ++ 
Sbjct: 150 SLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQE 209

Query: 162 ARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVA 221
           AR++FD++P K+ V W +MI+G ++N   ++++ +F  M +    + +  ++ +++ A  
Sbjct: 210 ARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRM-QAENIFPNEYTMVSLIKACT 268

Query: 222 EVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNA 281
           E+  L LG  I    +K      VY+ T L+  YSKCG ++ A  +F  + R  L + N+
Sbjct: 269 EMGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNS 328

Query: 282 MISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKS- 340
           MI+    +G  + +L LF ++     + ++ T +G+           L  C+H   +K  
Sbjct: 329 MITSLGVHGLGQEALNLFSEMERVNVKPDAITFIGV-----------LCACVHIKNVKEG 377

Query: 341 -----------GIVSNSSVLTALSTVYSRLNEMEAARK 367
                      GI         ++ +Y+R N ++ A K
Sbjct: 378 CAYFTRMTQHYGIAPIPEHYECMTELYARSNNLDEAFK 415



 Score =  129 bits (324), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 106/408 (25%), Positives = 175/408 (42%), Gaps = 37/408 (9%)

Query: 95  YTH---LRKNTALTPD-NFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALV 150
           YTH     KN  LTP  N      L     C +      +H   I SG  +D  +   L+
Sbjct: 7   YTHDVFPSKNIPLTPRGNIRAKKALFLLQNCKNFKHLRQIHAKIIRSGLSNDQLLTRKLI 66

Query: 151 DLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDS 210
            LY     +  A  +F ++    T  WN +I     N   + ++ ++ +MV  G    D 
Sbjct: 67  HLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQG-IAADK 125

Query: 211 TSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSK------------- 257
            +   V+ A      + LG  +    +K GF   V+V   L+ FY K             
Sbjct: 126 FTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEK 185

Query: 258 ------------------CGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLF 299
                             CG+++ A  +F +I   +++S  AMI+GY  N + E +L LF
Sbjct: 186 MRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELF 245

Query: 300 RQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRL 359
           +++ A     N  T+V LI      G L L   IH + +K+ I     + TAL  +YS+ 
Sbjct: 246 KRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKC 305

Query: 360 NEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSIL 419
             ++ A ++F+    KSL +WN+MI     +GL +EA++LF EM+   V P+ +T   +L
Sbjct: 306 GSIKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVL 365

Query: 420 SACAQLGAISLG-KWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEA 466
            AC  +  +  G  +   + +             + ++YA+  N+ EA
Sbjct: 366 CACVHIKNVKEGCAYFTRMTQHYGIAPIPEHYECMTELYARSNNLDEA 413


>gi|413923915|gb|AFW63847.1| hypothetical protein ZEAMMB73_561595 [Zea mays]
          Length = 1274

 Score =  506 bits (1304), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 280/729 (38%), Positives = 425/729 (58%), Gaps = 5/729 (0%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           AR +F  IP PD   +N +IR +S      ++I  Y  + +   + P+ +T+ FVL A S
Sbjct: 53  ARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLR-FRVAPNKYTFPFVLKACS 111

Query: 120 ACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNS 179
           A  D   G  +H HA  +G  +DLFV  AL+DLY + +    AR VF KMP +D V WN+
Sbjct: 112 ALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKMPMRDVVAWNA 171

Query: 180 MISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKL 239
           M++G   +  +  +I    DM  +GG   +++++ ++LP +A+   L  G  I    L+ 
Sbjct: 172 MLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSIHAYCLRA 231

Query: 240 GFH---DHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSL 296
                 + V + T L+  Y+KC ++  A  +F  +   + ++ +A+I G+    +   + 
Sbjct: 232 CLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGGFVLCDRMTEAF 291

Query: 297 RLFRQLLASAE-RVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTV 355
            LF+ +L      ++++++   + V      LH+   +H+   KSGI ++ +   +L ++
Sbjct: 292 NLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLHALIAKSGIHADLTASNSLLSM 351

Query: 356 YSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTV 415
           Y++   +  A   FDE + K   S+ A+++G  QNG  EEA  +F++MQA  + P+  T+
Sbjct: 352 YAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNGKAEEAFLVFKKMQACNMEPDIATM 411

Query: 416 SSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSH 475
            S++ AC+ L A+  GK  H  V  R       +  +LIDMYAKCG I  +R++FD M  
Sbjct: 412 VSLIPACSHLAALQHGKCSHGSVIIRGLALETSICNSLIDMYAKCGKIDLSRQVFDKMPA 471

Query: 476 KSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEI 535
           +  V+WNTMI+GYG+HG G EA  LF  M + G  P  VTF+ ++ ACSH+GLV EG   
Sbjct: 472 RDVVSWNTMIAGYGIHGLGKEATTLFLGMKNQGFAPDDVTFICLIAACSHSGLVTEGKHW 531

Query: 536 FQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHK 595
           F +M H +G  P  EHY CMVD+L R G L++A +FI+ + ++    VWGALLGAC IHK
Sbjct: 532 FDTMTHKYGILPRMEHYICMVDLLARGGLLDEAYQFIQSMPLKADVRVWGALLGACRIHK 591

Query: 596 DTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLI 655
           + +L +  S  + +L PE  G  VLLSNI+SA   + +AA VR + K +   K+PG + I
Sbjct: 592 NIDLGKQVSRIIQKLGPEGTGNFVLLSNIFSAAGRFDEAAEVRIIQKVKGFKKSPGYSWI 651

Query: 656 EVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKV 715
           E+ G+ H F  GDQ HP S  IY  L+ +   +++ G+Q +T   L D+EEEEKE  +  
Sbjct: 652 EINGSLHAFVGGDQSHPCSRDIYHELDNIMVDIKKLGYQADTSFVLQDLEEEEKEKALLY 711

Query: 716 HSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKG 775
           HSEKLAIAFG+++      I + KNLRVC DCHTA K+++ V  R I+VRD NRFHHFK 
Sbjct: 712 HSEKLAIAFGVLSLNEDKTIFVTKNLRVCGDCHTAIKYMTLVRNRTIIVRDTNRFHHFKN 771

Query: 776 GVCSCGDYW 784
           G CSCG++W
Sbjct: 772 GQCSCGNFW 780



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 98/339 (28%), Positives = 163/339 (48%), Gaps = 7/339 (2%)

Query: 259 GEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLI 318
           G++  A  +F  I  PD  + NA+I  Y+  G   +++ L+R +L      N  T   ++
Sbjct: 48  GQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNKYTFPFVL 107

Query: 319 PVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLA 378
                   L     IH+    +G+ ++  V TAL  +Y R      AR +F +   + + 
Sbjct: 108 KACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKMPMRDVV 167

Query: 379 SWNAMIAGYTQNGLTEEAISLFQEMQA-SKVAPNPVTVSSILSACAQLGAISLGKWVHEL 437
           +WNAM+AGY  +G+   AI+   +MQ    + PN  T+ S+L   AQ GA+  G  +H  
Sbjct: 168 AWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSIHAY 227

Query: 438 VKSRNFESN---IYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHG 494
                 E N   + + TAL+DMYAKC  +V A  +F  M  +++VTW+ +I G+ L    
Sbjct: 228 CLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGGFVLCDRM 287

Query: 495 LEALQLFSEMLHSGI-RPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYA 553
            EA  LF +ML  G+   S  +  S L  C+    +  G ++  ++I   G         
Sbjct: 288 TEAFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQL-HALIAKSGIHADLTASN 346

Query: 554 CMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACM 592
            ++ +  +AG + +A  F   +AV+   + +GALL  C+
Sbjct: 347 SLLSMYAKAGLINEATMFFDEIAVKDTIS-YGALLSGCV 384



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 43/158 (27%), Positives = 68/158 (43%), Gaps = 1/158 (0%)

Query: 26  TQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNN 85
           TQ HA I   G   DL+    L    +       A   F  I   D   +  ++ G   N
Sbjct: 327 TQLHALIAKSGIHADLTASNSLLSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQN 386

Query: 86  EMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFV 145
              + +   +  ++    + PD  T   ++ A S       G   HG  I+ G   +  +
Sbjct: 387 GKAEEAFLVFKKMQA-CNMEPDIATMVSLIPACSHLAALQHGKCSHGSVIIRGLALETSI 445

Query: 146 GAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISG 183
             +L+D+Y K   +  +R+VFDKMP +D V WN+MI+G
Sbjct: 446 CNSLIDMYAKCGKIDLSRQVFDKMPARDVVSWNTMIAG 483


>gi|413923916|gb|AFW63848.1| hypothetical protein ZEAMMB73_561595 [Zea mays]
          Length = 1174

 Score =  506 bits (1304), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 280/729 (38%), Positives = 425/729 (58%), Gaps = 5/729 (0%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           AR +F  IP PD   +N +IR +S      ++I  Y  + +   + P+ +T+ FVL A S
Sbjct: 53  ARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLR-FRVAPNKYTFPFVLKACS 111

Query: 120 ACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNS 179
           A  D   G  +H HA  +G  +DLFV  AL+DLY + +    AR VF KMP +D V WN+
Sbjct: 112 ALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKMPMRDVVAWNA 171

Query: 180 MISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKL 239
           M++G   +  +  +I    DM  +GG   +++++ ++LP +A+   L  G  I    L+ 
Sbjct: 172 MLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSIHAYCLRA 231

Query: 240 GFH---DHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSL 296
                 + V + T L+  Y+KC ++  A  +F  +   + ++ +A+I G+    +   + 
Sbjct: 232 CLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGGFVLCDRMTEAF 291

Query: 297 RLFRQLLASAE-RVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTV 355
            LF+ +L      ++++++   + V      LH+   +H+   KSGI ++ +   +L ++
Sbjct: 292 NLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLHALIAKSGIHADLTASNSLLSM 351

Query: 356 YSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTV 415
           Y++   +  A   FDE + K   S+ A+++G  QNG  EEA  +F++MQA  + P+  T+
Sbjct: 352 YAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNGKAEEAFLVFKKMQACNMEPDIATM 411

Query: 416 SSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSH 475
            S++ AC+ L A+  GK  H  V  R       +  +LIDMYAKCG I  +R++FD M  
Sbjct: 412 VSLIPACSHLAALQHGKCSHGSVIIRGLALETSICNSLIDMYAKCGKIDLSRQVFDKMPA 471

Query: 476 KSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEI 535
           +  V+WNTMI+GYG+HG G EA  LF  M + G  P  VTF+ ++ ACSH+GLV EG   
Sbjct: 472 RDVVSWNTMIAGYGIHGLGKEATTLFLGMKNQGFAPDDVTFICLIAACSHSGLVTEGKHW 531

Query: 536 FQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHK 595
           F +M H +G  P  EHY CMVD+L R G L++A +FI+ + ++    VWGALLGAC IHK
Sbjct: 532 FDTMTHKYGILPRMEHYICMVDLLARGGLLDEAYQFIQSMPLKADVRVWGALLGACRIHK 591

Query: 596 DTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLI 655
           + +L +  S  + +L PE  G  VLLSNI+SA   + +AA VR + K +   K+PG + I
Sbjct: 592 NIDLGKQVSRIIQKLGPEGTGNFVLLSNIFSAAGRFDEAAEVRIIQKVKGFKKSPGYSWI 651

Query: 656 EVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKV 715
           E+ G+ H F  GDQ HP S  IY  L+ +   +++ G+Q +T   L D+EEEEKE  +  
Sbjct: 652 EINGSLHAFVGGDQSHPCSRDIYHELDNIMVDIKKLGYQADTSFVLQDLEEEEKEKALLY 711

Query: 716 HSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKG 775
           HSEKLAIAFG+++      I + KNLRVC DCHTA K+++ V  R I+VRD NRFHHFK 
Sbjct: 712 HSEKLAIAFGVLSLNEDKTIFVTKNLRVCGDCHTAIKYMTLVRNRTIIVRDTNRFHHFKN 771

Query: 776 GVCSCGDYW 784
           G CSCG++W
Sbjct: 772 GQCSCGNFW 780



 Score =  129 bits (323), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 98/339 (28%), Positives = 163/339 (48%), Gaps = 7/339 (2%)

Query: 259 GEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLI 318
           G++  A  +F  I  PD  + NA+I  Y+  G   +++ L+R +L      N  T   ++
Sbjct: 48  GQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNKYTFPFVL 107

Query: 319 PVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLA 378
                   L     IH+    +G+ ++  V TAL  +Y R      AR +F +   + + 
Sbjct: 108 KACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKMPMRDVV 167

Query: 379 SWNAMIAGYTQNGLTEEAISLFQEMQA-SKVAPNPVTVSSILSACAQLGAISLGKWVHEL 437
           +WNAM+AGY  +G+   AI+   +MQ    + PN  T+ S+L   AQ GA+  G  +H  
Sbjct: 168 AWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSIHAY 227

Query: 438 VKSRNFESN---IYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHG 494
                 E N   + + TAL+DMYAKC  +V A  +F  M  +++VTW+ +I G+ L    
Sbjct: 228 CLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGGFVLCDRM 287

Query: 495 LEALQLFSEMLHSGI-RPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYA 553
            EA  LF +ML  G+   S  +  S L  C+    +  G ++  ++I   G         
Sbjct: 288 TEAFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQL-HALIAKSGIHADLTASN 346

Query: 554 CMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACM 592
            ++ +  +AG + +A  F   +AV+   + +GALL  C+
Sbjct: 347 SLLSMYAKAGLINEATMFFDEIAVKDTIS-YGALLSGCV 384



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 43/158 (27%), Positives = 68/158 (43%), Gaps = 1/158 (0%)

Query: 26  TQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNN 85
           TQ HA I   G   DL+    L    +       A   F  I   D   +  ++ G   N
Sbjct: 327 TQLHALIAKSGIHADLTASNSLLSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQN 386

Query: 86  EMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFV 145
              + +   +  ++    + PD  T   ++ A S       G   HG  I+ G   +  +
Sbjct: 387 GKAEEAFLVFKKMQA-CNMEPDIATMVSLIPACSHLAALQHGKCSHGSVIIRGLALETSI 445

Query: 146 GAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISG 183
             +L+D+Y K   +  +R+VFDKMP +D V WN+MI+G
Sbjct: 446 CNSLIDMYAKCGKIDLSRQVFDKMPARDVVSWNTMIAG 483


>gi|147805129|emb|CAN64485.1| hypothetical protein VITISV_035038 [Vitis vinifera]
          Length = 1740

 Score =  506 bits (1304), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 256/624 (41%), Positives = 381/624 (61%), Gaps = 34/624 (5%)

Query: 161  SARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAV 220
            S R +FD++P+K+ V +N MI   + N  + D++ VF +M  +G    D  +   VL A 
Sbjct: 1078 STRHIFDEIPKKNVVFFNVMIRSYVNNHLYSDALLVFKNMAGHGID-PDHYTYPCVLKAS 1136

Query: 221  AEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCN 280
            +  ++L +GM+I    +++G   +V+V  GL+S Y KCG +  A  +  ++   D++S N
Sbjct: 1137 SGSEDLWVGMQIHAAVVRVGLDLNVFVGNGLISMYGKCGCLVEACRVLDZMPCRDVVSWN 1196

Query: 281  AMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKS 340
            ++++G   NG+ + +L + +++     + ++ T+  L+P                     
Sbjct: 1197 SLVAGCARNGQFDDALEVCKEMELLGLKPDAGTMASLLPA-------------------- 1236

Query: 341  GIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLF 400
              V+N+            L+ +   +++F + + KSL SWN MIA Y  N +  EA+ +F
Sbjct: 1237 --VTNTC-----------LDNVSFVKEMFMKLANKSLVSWNVMIAVYMNNSMPAEAVDIF 1283

Query: 401  QEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKC 460
             +M+   V P+ ++++S+L AC  L A+ LG+ +HE V  +  + N+ +  ALIDMYAKC
Sbjct: 1284 LQMEDHAVDPDAISIASVLPACGDLSALLLGRRIHEYVVRKRLQPNLLLENALIDMYAKC 1343

Query: 461  GNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVL 520
            G +  ARE+FD M  +  V+W +MIS YG++G G +A+ LFS M   G+ P  + F+SVL
Sbjct: 1344 GCLEYAREVFDQMKFRDVVSWTSMISAYGMNGKGRDAVSLFSRMQDLGLNPDSIAFVSVL 1403

Query: 521  YACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPG 580
             ACSHAGL+ EG   F+ M  +    P  EH+ CMVD+LGRAGQ+++A  FIK + +EP 
Sbjct: 1404 SACSHAGLLDEGRYYFKLMTEECKIVPRIEHFVCMVDLLGRAGQVDEAYGFIKQMPMEPN 1463

Query: 581  PAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQV 640
              VWGALL AC ++ +  +  +A+++LF+L PE  GY+VLLSNIY+    +    TVR +
Sbjct: 1464 ERVWGALLSACRVYSNMIIGLLAADQLFQLCPEQSGYYVLLSNIYAKAGRWEDVTTVRSI 1523

Query: 641  VKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTA 700
            +K + + K PG +  E+    H F +GDQ HPQS  IY  L+ L GKM+EAG+  ET +A
Sbjct: 1524 MKTKGIKKMPGVSNFELDNRVHTFLAGDQSHPQSKQIYEELDVLVGKMKEAGYVPETDSA 1583

Query: 701  LHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGR 760
            LHDVEEE+KE  + VHSEKLAIAF ++ T PG+ IRI KNLRVC DCH A K ISK+ GR
Sbjct: 1584 LHDVEEEDKECHLAVHSEKLAIAFAILNTAPGSPIRITKNLRVCGDCHIAAKLISKIVGR 1643

Query: 761  VIVVRDANRFHHFKGGVCSCGDYW 784
             I +RD NRFHHF  GVCSCGDYW
Sbjct: 1644 EITIRDTNRFHHFYNGVCSCGDYW 1667



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 135/522 (25%), Positives = 240/522 (45%), Gaps = 45/522 (8%)

Query: 8    SRNLFLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATC----YARAL 63
            + NL   +L        L + H++I I    +DL +   L  +L    A C      R +
Sbjct: 1026 TENLCGQILDKNPDIKYLKKLHSKICI---DHDLHSNPSLGIKLMRAYAVCGEPWSTRHI 1082

Query: 64   FFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCD 123
            F  IPK ++  FNV+IR + NN +   ++  + ++  +  + PD++TY  VL A+S   D
Sbjct: 1083 FDEIPKKNVVFFNVMIRSYVNNHLYSDALLVFKNMAGH-GIDPDHYTYPCVLKASSGSED 1141

Query: 124  RSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISG 183
              +G+ +H   +  G   ++FVG  L+ +Y K   +  A +V D+MP +D V WNS+++G
Sbjct: 1142 LWVGMQIHAAVVRVGLDLNVFVGNGLISMYGKCGCLVEACRVLDZMPCRDVVSWNSLVAG 1201

Query: 184  LMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHD 243
              +N  F D++ V  +M    G   D+ ++A++LPAV             CL        
Sbjct: 1202 CARNGQFDDALEVCKEM-ELLGLKPDAGTMASLLPAVTNT----------CL-------- 1242

Query: 244  HVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLL 303
                    VSF  +         +F  +    L+S N MI+ Y  N     ++ +F Q+ 
Sbjct: 1243 ------DNVSFVKE---------MFMKLANKSLVSWNVMIAVYMNNSMPAEAVDIFLQME 1287

Query: 304  ASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEME 363
              A   ++ +I  ++P       L L   IH + ++  +  N  +  AL  +Y++   +E
Sbjct: 1288 DHAVDPDAISIASVLPACGDLSALLLGRRIHEYVVRKRLQPNLLLENALIDMYAKCGCLE 1347

Query: 364  AARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACA 423
             AR++FD+   + + SW +MI+ Y  NG   +A+SLF  MQ   + P+ +   S+LSAC+
Sbjct: 1348 YAREVFDQMKFRDVVSWTSMISAYGMNGKGRDAVSLFSRMQDLGLNPDSIAFVSVLSACS 1407

Query: 424  QLGAISLGKWVHELVKSR-NFESNIYVSTALIDMYAKCGNIVEARELFDLMS-HKSEVTW 481
              G +  G++  +L+         I     ++D+  + G + EA      M    +E  W
Sbjct: 1408 HAGLLDEGRYYFKLMTEECKIVPRIEHFVCMVDLLGRAGQVDEAYGFIKQMPMEPNERVW 1467

Query: 482  NTMISGYGLHGHGLEALQLFSEMLHSGIRPSG-VTFLSVLYA 522
              ++S   ++ + +  L    ++       SG    LS +YA
Sbjct: 1468 GALLSACRVYSNMIIGLLAADQLFQLCPEQSGYYVLLSNIYA 1509



 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 60/197 (30%), Positives = 102/197 (51%), Gaps = 1/197 (0%)

Query: 333  IHS-FCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNG 391
            +HS  C+   + SN S+   L   Y+   E  + R +FDE  +K++  +N MI  Y  N 
Sbjct: 1046 LHSKICIDHDLHSNPSLGIKLMRAYAVCGEPWSTRHIFDEIPKKNVVFFNVMIRSYVNNH 1105

Query: 392  LTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVST 451
            L  +A+ +F+ M    + P+  T   +L A +    + +G  +H  V     + N++V  
Sbjct: 1106 LYSDALLVFKNMAGHGIDPDHYTYPCVLKASSGSEDLWVGMQIHAAVVRVGLDLNVFVGN 1165

Query: 452  ALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRP 511
             LI MY KCG +VEA  + D M  +  V+WN++++G   +G   +AL++  EM   G++P
Sbjct: 1166 GLISMYGKCGCLVEACRVLDZMPCRDVVSWNSLVAGCARNGQFDDALEVCKEMELLGLKP 1225

Query: 512  SGVTFLSVLYACSHAGL 528
               T  S+L A ++  L
Sbjct: 1226 DAGTMASLLPAVTNTCL 1242



 Score = 47.0 bits (110), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 49/184 (26%), Positives = 74/184 (40%), Gaps = 37/184 (20%)

Query: 442  NFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLF 501
            +  SN  +   L+  YA CG     R +FD +  K+ V +N MI  Y  +    +AL +F
Sbjct: 1055 DLHSNPSLGIKLMRAYAVCGEPWSTRHIFDEIPKKNVVFFNVMIRSYVNNHLYSDALLVF 1114

Query: 502  SEMLHSGIRPSGVTFLSVLYACS-----------HAGLVREGDEIFQSMIHDHGFKPLAE 550
              M   GI P   T+  VL A S           HA +VR G ++  ++   +G   +  
Sbjct: 1115 KNMAGHGIDPDHYTYPCVLKASSGSEDLWVGMQIHAAVVRVGLDL--NVFVGNGLISMYG 1172

Query: 551  HYACMV------------DIL---------GRAGQLEKALEFIKG---LAVEPGPAVWGA 586
               C+V            D++          R GQ + ALE  K    L ++P      +
Sbjct: 1173 KCGCLVEACRVLDZMPCRDVVSWNSLVAGCARNGQFDDALEVCKEMELLGLKPDAGTMAS 1232

Query: 587  LLGA 590
            LL A
Sbjct: 1233 LLPA 1236


>gi|168042957|ref|XP_001773953.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162674797|gb|EDQ61301.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 905

 Score =  506 bits (1304), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 274/777 (35%), Positives = 435/777 (55%), Gaps = 6/777 (0%)

Query: 12  FLSLLKGAKTQSQL---TQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIP 68
           ++S+L    + ++L    + H+QII  G+Q D      L            AR +F  I 
Sbjct: 131 YISILTACYSPAELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGIS 190

Query: 69  KPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGV 128
             D+  +N ++  ++     K  +  +  +  +  ++PD  TY  +L A +       G 
Sbjct: 191 PRDVVSYNTMLGLYAQKAYVKECLGLFGQM-SSEGISPDKVTYINLLDAFTTPSMLDEGK 249

Query: 129 LLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNC 188
            +H   +  G  SD+ VG ALV +  +   V SA++ F  + ++D V++N++I+ L ++ 
Sbjct: 250 RIHKLTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGIADRDVVVYNALIAALAQHG 309

Query: 189 CFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVL 248
              ++   +  M R+ G  L+ T+  ++L A +  + L  G  I     + G    V + 
Sbjct: 310 HNVEAFEQYYRM-RSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIG 368

Query: 249 TGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAER 308
             L+S Y++CG++ +A  LF  + + DLIS NA+I+GY        ++RL++Q+ +   +
Sbjct: 369 NALISMYARCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVK 428

Query: 309 VNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKL 368
               T + L+              IH   L+SGI SN  +  AL  +Y R   +  A+ +
Sbjct: 429 PGRVTFLHLLSACANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNV 488

Query: 369 FDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAI 428
           F+ +  + + SWN+MIAG+ Q+G  E A  LFQEMQ  ++ P+ +T +S+LS C    A+
Sbjct: 489 FEGTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEAL 548

Query: 429 SLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGY 488
            LGK +H  +     + ++ +  ALI+MY +CG++ +AR +F  + H+  ++W  MI G 
Sbjct: 549 ELGKQIHGRITESGLQLDVNLGNALINMYIRCGSLQDARNVFHSLQHRDVMSWTAMIGGC 608

Query: 489 GLHGHGLEALQLFSEMLHSGIRP-SGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKP 547
              G  ++A++LF +M + G RP  G TF S+L AC+HAGLV EG +IF SM  ++G  P
Sbjct: 609 ADQGEDMKAIELFWQMQNEGFRPPDGSTFTSILSACNHAGLVLEGYQIFSSMESEYGVLP 668

Query: 548 LAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKL 607
             EHY C+V +LGRA + ++A   I  +   P  AVW  LLGAC IH +  LA  A+   
Sbjct: 669 TIEHYGCLVGLLGRARRFQEAETLINQMPFPPDAAVWETLLGACRIHGNIALAEHAANNA 728

Query: 608 FELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSG 667
            +L+  N   ++LLSN+Y+A   +   A +R+V++ R + K PG + IEV    H F + 
Sbjct: 729 LKLNARNPAVYILLSNVYAAAGRWDDVAKIRRVMEGRGIRKEPGRSWIEVDNIIHEFIAA 788

Query: 668 DQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLI 727
           D+ HP++  IYA L++L+ +M EAG+  +T   LHD+ +  +E  +  HSE+LAIA+GLI
Sbjct: 789 DRSHPETAEIYAELKRLSVEMEEAGYFPDTQHVLHDLGKAHQETSLCTHSERLAIAYGLI 848

Query: 728 ATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
            T PGT IRI KNLR+C DCHTA+KFISK+ GR I+ RD+NRFH FK G CSC DYW
Sbjct: 849 KTPPGTPIRIFKNLRICGDCHTASKFISKLVGREIIARDSNRFHSFKNGKCSCEDYW 905



 Score =  243 bits (619), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 156/590 (26%), Positives = 287/590 (48%), Gaps = 7/590 (1%)

Query: 5   TPQSRNLFLSLLKGAKTQSQLTQT---HAQIIIHGFQNDLSTVTKLAHRLSDFKATCYAR 61
           T   R  +++LL+    +  L +    HAQ++  G   D+     L +     ++   A 
Sbjct: 23  TETDRATYVALLQNCTRKRLLPEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVLDAH 82

Query: 62  ALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASAC 121
            +F  +P+ D+  +N +I  ++     K +   +  + +N    P+  TY  +L+A  + 
Sbjct: 83  QVFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEM-QNAGFIPNKITYISILTACYSP 141

Query: 122 CDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMI 181
            +   G  +H   I +GY  D  V  +L+ +Y K   +  AR+VF  +  +D V +N+M+
Sbjct: 142 AELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTML 201

Query: 182 SGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGF 241
               +    ++ + +FG M   G +  D  +   +L A      L  G  I  L ++ G 
Sbjct: 202 GLYAQKAYVKECLGLFGQMSSEGIS-PDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGL 260

Query: 242 HDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQ 301
           +  + V T LV+   +CG+V+ A+  F+ I   D++  NA+I+    +G    +   + +
Sbjct: 261 NSDIRVGTALVTMCVRCGDVDSAKQAFKGIADRDVVVYNALIAALAQHGHNVEAFEQYYR 320

Query: 302 LLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNE 361
           + +    +N +T + ++        L     IHS   + G  S+  +  AL ++Y+R  +
Sbjct: 321 MRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGD 380

Query: 362 MEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSA 421
           +  AR+LF    ++ L SWNA+IAGY +     EA+ L+++MQ+  V P  VT   +LSA
Sbjct: 381 LPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSA 440

Query: 422 CAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTW 481
           CA   A + GK +HE +     +SN +++ AL++MY +CG+++EA+ +F+    +  ++W
Sbjct: 441 CANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISW 500

Query: 482 NTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIH 541
           N+MI+G+  HG    A +LF EM +  + P  +TF SVL  C +   +  G +I    I 
Sbjct: 501 NSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQI-HGRIT 559

Query: 542 DHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGAC 591
           + G +        ++++  R G L+ A      L        W A++G C
Sbjct: 560 ESGLQLDVNLGNALINMYIRCGSLQDARNVFHSLQ-HRDVMSWTAMIGGC 608



 Score =  233 bits (595), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 145/505 (28%), Positives = 251/505 (49%), Gaps = 13/505 (2%)

Query: 130 LHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCC 189
           +H   + +G G D+F+   L+++Y K   V  A +VF +MP +D + WNS+IS   +   
Sbjct: 49  IHAQMVEAGVGPDIFLSNLLINMYVKCRSVLDAHQVFKEMPRRDVISWNSLISCYAQQGF 108

Query: 190 FQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLT 249
            + +  +F +M +N G   +  +  ++L A     EL  G +I    +K G+     V  
Sbjct: 109 KKKAFQLFEEM-QNAGFIPNKITYISILTACYSPAELENGKKIHSQIIKAGYQRDPRVQN 167

Query: 250 GLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERV 309
            L+S Y KCG++ RA  +F  I   D++S N M+  Y      +  L LF Q+ +     
Sbjct: 168 SLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYAQKAYVKECLGLFGQMSSEGISP 227

Query: 310 NSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLF 369
           +  T + L+  F     L     IH   ++ G+ S+  V TAL T+  R  ++++A++ F
Sbjct: 228 DKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAF 287

Query: 370 DESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAIS 429
              +++ +  +NA+IA   Q+G   EA   +  M++  VA N  T  SIL+AC+   A+ 
Sbjct: 288 KGIADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALE 347

Query: 430 LGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYG 489
            GK +H  +      S++ +  ALI MYA+CG++ +ARELF  M  +  ++WN +I+GY 
Sbjct: 348 AGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKARELFYTMPKRDLISWNAIIAGYA 407

Query: 490 LHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLA 549
                 EA++L+ +M   G++P  VTFL +L AC+++    +G  I + ++   G K   
Sbjct: 408 RREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDILRS-GIKSNG 466

Query: 550 EHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLF- 608
                ++++  R G L +A    +G         W +++     H     A     KLF 
Sbjct: 467 HLANALMNMYRRCGSLMEAQNVFEGTQAR-DVISWNSMIAGHAQHGSYETAY----KLFQ 521

Query: 609 -----ELDPENVGYHVLLSNIYSAE 628
                EL+P+N+ +  +LS   + E
Sbjct: 522 EMQNEELEPDNITFASVLSGCKNPE 546


>gi|168045266|ref|XP_001775099.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162673550|gb|EDQ60071.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 804

 Score =  506 bits (1302), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 284/785 (36%), Positives = 431/785 (54%), Gaps = 6/785 (0%)

Query: 4   KTPQSRNL-FLSLLKG---AKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCY 59
           K PQ  +  ++ LL+    AK  +   Q H  I+  G + ++     L    +   +   
Sbjct: 22  KGPQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRCGVKPNVYITNTLLKLYAHCGSVNE 81

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           AR LF       +  +NV+I G+++  + + +   +T L +   L PD FT+  +LSA S
Sbjct: 82  ARQLFDKFSNKSVVSWNVMISGYAHRGLAQEAFNLFT-LMQQERLEPDKFTFVSILSACS 140

Query: 120 ACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNS 179
           +    + G  +H   + +G  +D  VG AL+ +Y K   V+ AR+VFD M  +D V W +
Sbjct: 141 SPAVLNWGREIHVRVMEAGLANDTTVGNALISMYAKCGSVRDARRVFDAMASRDEVSWTT 200

Query: 180 MISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKL 239
           +     ++   ++S+  +  M++         +   VL A   +  L  G +I    ++ 
Sbjct: 201 LTGAYAESGYGEESLKTYHAMLQER-VRPSRITYMNVLSACGSLAALEKGKQIHAHIVES 259

Query: 240 GFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLF 299
            +H  V V T L   Y KCG  + A  +F  +   D+I+ N MI G+  +G+ E +   F
Sbjct: 260 EYHSDVRVSTALTKMYMKCGAFKDAREVFECLSYRDVIAWNTMIRGFVDSGQLEEAHGTF 319

Query: 300 RQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRL 359
            ++L      + +T   ++      G L     IH+   K G+VS+     AL  +YS+ 
Sbjct: 320 HRMLEEGVAPDRATYTTVLSACARPGGLARGKEIHARAAKDGLVSDVRFGNALINMYSKA 379

Query: 360 NEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSIL 419
             M+ AR++FD   ++ + SW  ++  Y       E+ + F++M    V  N +T   +L
Sbjct: 380 GSMKDARQVFDRMPKRDVVSWTTLLGRYADCDQVVESFTTFKQMLQQGVKANKITYMCVL 439

Query: 420 SACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEV 479
            AC+   A+  GK +H  V      +++ V+ AL+ MY KCG++ +A  +F+ MS +  V
Sbjct: 440 KACSNPVALKWGKEIHAEVVKAGLLADLAVTNALMSMYFKCGSVEDAIRVFEGMSMRDVV 499

Query: 480 TWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSM 539
           TWNT+I G G +G GLEALQ +  M   G+RP+  TF++VL AC    LV EG   F  M
Sbjct: 500 TWNTLIGGLGQNGRGLEALQRYEVMKSEGMRPNAATFVNVLSACRVCNLVEEGRRQFAFM 559

Query: 540 IHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNL 599
             D+G  P  +HYACMVDIL RAG L +A + I  + ++P  A+WGALL AC IH +  +
Sbjct: 560 SKDYGIVPTEKHYACMVDILARAGHLREAEDVILTIPLKPSAAMWGALLAACRIHCNVEI 619

Query: 600 ARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGG 659
              A+E   +L+P+N G +V LS IY+A   +   A +R+ +K+R + K PG + IE+ G
Sbjct: 620 GERAAEHCLKLEPQNAGLYVSLSAIYAAAGMWRDVAKLRKFMKERGVKKEPGRSWIEIAG 679

Query: 660 TPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEK 719
             H F + DQ HP++  IYA LE L  +M+  G+  +T   +HD+++E KE  +  HSEK
Sbjct: 680 EVHSFVARDQSHPRTQEIYAELETLKKQMKSLGYVPDTRFVMHDLDDEGKERAVCHHSEK 739

Query: 720 LAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCS 779
           LAIA+GLI+T PGT IRI KNLRVC DCHTATKFISK+T R I+ RDA+RFHHFK G CS
Sbjct: 740 LAIAYGLISTPPGTPIRISKNLRVCTDCHTATKFISKITKREIIARDAHRFHHFKNGECS 799

Query: 780 CGDYW 784
           CGDYW
Sbjct: 800 CGDYW 804


>gi|449492963|ref|XP_004159154.1| PREDICTED: uncharacterized protein LOC101226880 [Cucumis sativus]
          Length = 1725

 Score =  506 bits (1302), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 260/629 (41%), Positives = 383/629 (60%), Gaps = 11/629 (1%)

Query: 166  FDKMPEKDTV-LWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQ 224
            F K  +K  V  WNS+I+ L +     +++  F  + R  G     +S    + + + + 
Sbjct: 1098 FYKYVDKSNVHSWNSVIADLARGGDSVEALRAFSSL-RKLGLIPTRSSFPCTIKSCSALC 1156

Query: 225  ELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMIS 284
            +L  G          GF   ++V + L+  YSKCG+++ A  LF +I   +++S  +MI+
Sbjct: 1157 DLVSGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMIT 1216

Query: 285  GYTCNGKTESSLRLFRQLLASAERV--------NSSTIVGLIPVFYPFGHLHLTNCIHSF 336
            GY  N + +++L LF+  L     V        +S  +V ++          +T  +H F
Sbjct: 1217 GYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGF 1276

Query: 337  CLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEA 396
             +K G   +  V   L   Y++  +   ++K+FD   EK   SWN+MIA Y Q+GL+ EA
Sbjct: 1277 VVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEA 1336

Query: 397  ISLFQEM-QASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALID 455
            + +F  M +   V  N VT+S++L ACA  GA+  GK +H+ V   + E N+ V T++ID
Sbjct: 1337 LEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIID 1396

Query: 456  MYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVT 515
            MY KCG +  A++ FD M  K+  +W  M++GYG+HG   EAL +F +M+ +G++P+ +T
Sbjct: 1397 MYCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYIT 1456

Query: 516  FLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGL 575
            F+SVL ACSHAGLV EG   F +M H +  +P  EHY CMVD+ GRAG L +A   IK +
Sbjct: 1457 FVSVLAACSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYNLIKRM 1516

Query: 576  AVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAA 635
             ++P   VWG+LLGAC IHK+ +L  +A++KLFELDP+N GY+VLLSN+Y+    +    
Sbjct: 1517 KMKPDFVVWGSLLGACRIHKNVDLGEIAAQKLFELDPDNCGYYVLLSNLYADAGRWADVE 1576

Query: 636  TVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQT 695
             +R ++K R+L K PG +L+E+ G  HVF  GD+ HP    IY  LEKL  ++++ G+  
Sbjct: 1577 RMRMLMKNRQLVKPPGFSLVELKGRVHVFLVGDKEHPHHEMIYKYLEKLTLELQKIGYVP 1636

Query: 696  ETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFIS 755
               + LHDV+EEEKE++++VHSEKLA+AFG++ + PGT I IIKNLRVC DCHT  K IS
Sbjct: 1637 NMTSVLHDVDEEEKEIILRVHSEKLAVAFGVMNSAPGTTINIIKNLRVCGDCHTVIKLIS 1696

Query: 756  KVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
            K+  R  VVRD+ RFHHFK GVCSCGDYW
Sbjct: 1697 KLVHRDFVVRDSKRFHHFKDGVCSCGDYW 1725



 Score =  223 bits (567), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 124/368 (33%), Positives = 192/368 (52%), Gaps = 31/368 (8%)

Query: 237 LKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSL 296
           ++ G  +   +   L+  YS  G +  A LLF  I  P   + N +I   T NG +E +L
Sbjct: 51  IRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTINGLSEQAL 110

Query: 297 RLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGI-----VSNSSV--- 348
            L++ ++      +  T   +I     F  + L   +H   +K G      V N+ +   
Sbjct: 111 MLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQNNLIDFY 170

Query: 349 --------------------LTALSTVYSRL---NEMEAARKLFDESSEKSLASWNAMIA 385
                               + + +TV S L    +++ AR++FDE   K++ SW AMI 
Sbjct: 171 FKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVVSWTAMIN 230

Query: 386 GYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFES 445
           GY +N   EEA+ LF+ MQA  + PN  T+ S++ AC ++G ++LG+ +H+       E 
Sbjct: 231 GYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYAIKNCIEI 290

Query: 446 NIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEML 505
            +Y+ TALIDMY+KCG+I +A E+F+ M  KS  TWN+MI+  G+HG G EAL LFSEM 
Sbjct: 291 GVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEALNLFSEME 350

Query: 506 HSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQL 565
              ++P  +TF+ VL AC H   V+EG   F  M   +G  P+ EHY CM ++  R+  L
Sbjct: 351 RVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQHYGIAPIPEHYECMTELYARSNNL 410

Query: 566 EKALEFIK 573
           ++A +  K
Sbjct: 411 DEAFKSTK 418



 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 125/435 (28%), Positives = 221/435 (50%), Gaps = 11/435 (2%)

Query: 67   IPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSI 126
            + K ++  +N +I   +       ++  ++ LRK   L P   ++   + + SA CD   
Sbjct: 1102 VDKSNVHSWNSVIADLARGGDSVEALRAFSSLRK-LGLIPTRSSFPCTIKSCSALCDLVS 1160

Query: 127  GVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMK 186
            G + H  A V G+ +DLFV +AL+D+Y K   +K AR +FD++P ++ V W SMI+G ++
Sbjct: 1161 GRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQ 1220

Query: 187  NCCFQDSIWVFGDM------VRNGGTW-LDSTSVAAVLPAVAEVQELRLGMEIQCLGLKL 239
            N    +++ +F D       V +G    LDS  + +VL A + V    +   +    +K 
Sbjct: 1221 NEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKK 1280

Query: 240  GFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLF 299
            GF   + V   L+  Y+KCG+   ++ +F  +   D IS N+MI+ Y  +G +  +L +F
Sbjct: 1281 GFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVF 1340

Query: 300  RQLLAS-AERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSR 358
              ++     R N+ T+  ++      G L    CIH   +K  +  N  V T++  +Y +
Sbjct: 1341 HGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCK 1400

Query: 359  LNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSI 418
               +E A+K FD   EK++ SW AM+AGY  +G  +EA+ +F +M  + V PN +T  S+
Sbjct: 1401 CGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSV 1460

Query: 419  LSACAQLGAISLG-KWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKS 477
            L+AC+  G +  G  W + +    + E  I     ++D++ + G + EA  L   M  K 
Sbjct: 1461 LAACSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYNLIKRMKMKP 1520

Query: 478  E-VTWNTMISGYGLH 491
            + V W +++    +H
Sbjct: 1521 DFVVWGSLLGACRIH 1535



 Score =  142 bits (358), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 120/462 (25%), Positives = 204/462 (44%), Gaps = 47/462 (10%)

Query: 28   THAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNEM 87
            +H Q  + GF+ DL   + L    S       ARALF  IP  ++  +  +I G+  NE 
Sbjct: 1164 SHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQNEQ 1223

Query: 88   PKSSICFY-------THLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYG 140
              +++  +       T +     +  D+     VLSA S    + I   +HG  +  G+ 
Sbjct: 1224 ADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGFD 1283

Query: 141  SDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDM 200
              + VG  L+D Y K      ++KVFD M EKD + WNSMI+   ++    +++ VF  M
Sbjct: 1284 GSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHGM 1343

Query: 201  VRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGE 260
            VR+ G   ++ +++AVL A A    LR G  I    +K+    +V V T ++  Y KCG 
Sbjct: 1344 VRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGR 1403

Query: 261  VERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPV 320
            VE A+  F  +   ++ S  AM++GY  +G+ + +L +F +++ +  + N  T V +   
Sbjct: 1404 VEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSV--- 1460

Query: 321  FYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASW 380
                    L  C H+  ++ G              +   N M+    +     E  +  +
Sbjct: 1461 --------LAACSHAGLVEEG--------------WHWFNAMKHKYDI-----EPGIEHY 1493

Query: 381  NAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKS 440
              M+  + + G   EA +L + M   K+ P+ V   S+L AC     + LG    E+   
Sbjct: 1494 GCMVDLFGRAGCLNEAYNLIKRM---KMKPDFVVWGSLLGACRIHKNVDLG----EIAAQ 1546

Query: 441  RNFE---SNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEV 479
            + FE    N      L ++YA  G   +   +  LM ++  V
Sbjct: 1547 KLFELDPDNCGYYVLLSNLYADAGRWADVERMRMLMKNRQLV 1588



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 96/329 (29%), Positives = 158/329 (48%), Gaps = 37/329 (11%)

Query: 13  LSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDL 72
           L LL+  K    L Q HA+II  G  ND     KL H  S      YA  LF+ I  P  
Sbjct: 31  LFLLQNCKNFKHLRQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCT 90

Query: 73  FLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHG 132
           F +N+IIR  + N + + ++  Y ++     +  D FT+ FV+ A +      +G ++HG
Sbjct: 91  FTWNLIIRANTINGLSEQALMLYKNMVCQ-GIAADKFTFPFVIKACTNFLSIDLGKVVHG 149

Query: 133 HAIVSGYGSDLFVGAALVDLYFK-------------------FSW------------VKS 161
             I  G+  D+FV   L+D YFK                    SW            ++ 
Sbjct: 150 SLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQE 209

Query: 162 ARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVA 221
           AR++FD++P K+ V W +MI+G ++N   ++++ +F  M +    + +  ++ +++ A  
Sbjct: 210 ARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRM-QAENIFPNEYTMVSLIKACT 268

Query: 222 EVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNA 281
           E+  L LG  I    +K      VY+ T L+  YSKCG ++ A  +F  + R  L + N+
Sbjct: 269 EMGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNS 328

Query: 282 MISGYTCNGKTESSLRLFRQLLASAERVN 310
           MI+    +G  + +L LF ++    ERVN
Sbjct: 329 MITSLGVHGLGQEALNLFSEM----ERVN 353



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 106/408 (25%), Positives = 175/408 (42%), Gaps = 37/408 (9%)

Query: 95  YTH---LRKNTALTP-DNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALV 150
           YTH     KN  LTP  N      L     C +      +H   I SG  +D  +   L+
Sbjct: 7   YTHDVFPSKNIPLTPRGNIRAKKALFLLQNCKNFKHLRQIHAKIIRSGLSNDQLLTRKLI 66

Query: 151 DLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDS 210
            LY     +  A  +F ++    T  WN +I     N   + ++ ++ +MV  G    D 
Sbjct: 67  HLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQG-IAADK 125

Query: 211 TSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSK------------- 257
            +   V+ A      + LG  +    +K GF   V+V   L+ FY K             
Sbjct: 126 FTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEK 185

Query: 258 ------------------CGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLF 299
                             CG+++ A  +F +I   +++S  AMI+GY  N + E +L LF
Sbjct: 186 MRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELF 245

Query: 300 RQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRL 359
           +++ A     N  T+V LI      G L L   IH + +K+ I     + TAL  +YS+ 
Sbjct: 246 KRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKC 305

Query: 360 NEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSIL 419
             ++ A ++F+    KSL +WN+MI     +GL +EA++LF EM+   V P+ +T   +L
Sbjct: 306 GSIKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVL 365

Query: 420 SACAQLGAISLG-KWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEA 466
            AC  +  +  G  +   + +             + ++YA+  N+ EA
Sbjct: 366 CACVHIKNVKEGCAYFTRMTQHYGIAPIPEHYECMTELYARSNNLDEA 413



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 83/306 (27%), Positives = 140/306 (45%), Gaps = 44/306 (14%)

Query: 324 FGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAM 383
           F HL     IH+  ++SG+ ++  +   L  +YS    +  A  LF +       +WN +
Sbjct: 40  FKHLRQ---IHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLI 96

Query: 384 IAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNF 443
           I   T NGL+E+A+ L++ M    +A +  T   ++ AC    +I LGK VH  +    F
Sbjct: 97  IRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGF 156

Query: 444 ESNIYVSTALIDMYAKCG---------------NIV----------------EARELFDL 472
             +++V   LID Y KCG               N+V                EAR +FD 
Sbjct: 157 SGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDE 216

Query: 473 MSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREG 532
           +  K+ V+W  MI+GY  +    EAL+LF  M    I P+  T +S++ AC+  G++  G
Sbjct: 217 IPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLG 276

Query: 533 DEIFQSMIHDHGFKPLAE----HYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALL 588
                  IHD+  K   E        ++D+  + G ++ A+E  + +  +  P  W +++
Sbjct: 277 -----RGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLP-TWNSMI 330

Query: 589 GACMIH 594
            +  +H
Sbjct: 331 TSLGVH 336



 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 44/170 (25%), Positives = 89/170 (52%), Gaps = 2/170 (1%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           AR +F  IP  ++  +  +I G+  N+ P+ ++  +  ++    + P+ +T   ++ A +
Sbjct: 210 ARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAEN-IFPNEYTMVSLIKACT 268

Query: 120 ACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNS 179
                ++G  +H +AI +     +++G AL+D+Y K   +K A +VF+ MP K    WNS
Sbjct: 269 EMGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNS 328

Query: 180 MISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLG 229
           MI+ L  +   Q+++ +F +M R      D+ +   VL A   ++ ++ G
Sbjct: 329 MITSLGVHGLGQEALNLFSEMERV-NVKPDAITFIGVLCACVHIKNVKEG 377


>gi|449440243|ref|XP_004137894.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g08820-like [Cucumis sativus]
          Length = 688

 Score =  506 bits (1302), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 266/656 (40%), Positives = 379/656 (57%), Gaps = 6/656 (0%)

Query: 129 LLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNC 188
           LL  H     Y  +L +  AL      F     ++ VF ++ E +  LWN+MI GL+   
Sbjct: 39  LLRLHLDQDNYLLNLILCCAL-----DFGSTNYSKLVFSQVKEPNIFLWNTMIRGLVSKD 93

Query: 189 CFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVL 248
           CF D+I ++G M R GG   ++ ++  VL A A   ++RLG++I  L +K G+   V+V 
Sbjct: 94  CFDDAIHLYGSM-RGGGFLPNNFTIPFVLKACARKLDVRLGLKIHSLLVKAGYDHDVFVK 152

Query: 249 TGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAER 308
           T L+S Y KC   + A  +F DI   +++S  A+I+GY  +G    ++  F++LL    +
Sbjct: 153 TSLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYISSGHFREAIGAFKKLLEMGLK 212

Query: 309 VNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKL 368
            +S ++V ++      G       I  +   SG+  N  V T+L  +Y +   +E A  +
Sbjct: 213 PDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVATSLLDMYVKCGNLERANLI 272

Query: 369 FDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAI 428
           F    EK + SW+ MI GY  NGL ++A+ LF +MQ+  + P+  T+  +LSACA LGA+
Sbjct: 273 FSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKPDCYTMVGVLSACATLGAL 332

Query: 429 SLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGY 488
            LG W   L+    F SN  + TALIDMY+KCG++ +A E+F  M  K  V WN M+ G 
Sbjct: 333 DLGIWASSLMDRNEFLSNPVLGTALIDMYSKCGSVTQAWEIFTAMKRKDRVVWNAMMVGL 392

Query: 489 GLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPL 548
            ++GH      LFS +   GIRP   TF+ +L  C+H G V EG + F +M       P 
Sbjct: 393 SMNGHAKAVFSLFSLVEKHGIRPDENTFIGLLCGCTHGGFVNEGRQFFNNMKRVFSLTPS 452

Query: 549 AEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLF 608
            EHY CMVD+LGRAG L +A + I  + ++P   VWGALLG C +HKDT+LA    +KL 
Sbjct: 453 IEHYGCMVDLLGRAGLLNEAHQLINNMPMKPNAVVWGALLGGCKLHKDTHLAEQVLKKLI 512

Query: 609 ELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGD 668
           EL+P N G +V LSNIYS    + +A  +R  +K++++ K   C+ IE+ G  H F  GD
Sbjct: 513 ELEPWNSGNYVQLSNIYSGNHRWEEAEKIRSTMKEQQIQKIRACSWIEIDGIVHEFLVGD 572

Query: 669 QLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIA 728
           + H  S  IYA L++L  +++  G    T   L D+EEEEKE  +  HSEKLA+AFGLIA
Sbjct: 573 KSHWLSEKIYAKLDELGRELKAVGHVPTTEFVLFDIEEEEKEHFLGYHSEKLAVAFGLIA 632

Query: 729 TEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           + P   IR++KNLRVC DCH A K ISK+T R I++RD NRFH F  G CSC DYW
Sbjct: 633 SPPNHVIRVVKNLRVCGDCHDAIKLISKITKREIIIRDTNRFHTFIDGSCSCRDYW 688



 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 147/514 (28%), Positives = 254/514 (49%), Gaps = 5/514 (0%)

Query: 15  LLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFL 74
           L  G    +QL   HA+++      D   +  +     DF +T Y++ +F  + +P++FL
Sbjct: 22  LSNGLNFFNQLKHIHARLLRLHLDQDNYLLNLILCCALDFGSTNYSKLVFSQVKEPNIFL 81

Query: 75  FNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHA 134
           +N +IRG  + +    +I  Y  +R    L P+NFT  FVL A +   D  +G+ +H   
Sbjct: 82  WNTMIRGLVSKDCFDDAIHLYGSMRGGGFL-PNNFTIPFVLKACARKLDVRLGLKIHSLL 140

Query: 135 IVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSI 194
           + +GY  D+FV  +L+ LY K      A KVFD +P+K+ V W ++I+G + +  F+++I
Sbjct: 141 VKAGYDHDVFVKTSLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYISSGHFREAI 200

Query: 195 WVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSF 254
             F  ++  G    DS S+  VL A A + +   G  I       G   +V+V T L+  
Sbjct: 201 GAFKKLLEMGLK-PDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVATSLLDM 259

Query: 255 YSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTI 314
           Y KCG +ERA L+F  +   D++S + MI GY  NG  + +L LF Q+ +   + +  T+
Sbjct: 260 YVKCGNLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKPDCYTM 319

Query: 315 VGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSE 374
           VG++      G L L     S   ++  +SN  + TAL  +YS+   +  A ++F     
Sbjct: 320 VGVLSACATLGALDLGIWASSLMDRNEFLSNPVLGTALIDMYSKCGSVTQAWEIFTAMKR 379

Query: 375 KSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGK-W 433
           K    WNAM+ G + NG  +   SLF  ++   + P+  T   +L  C   G ++ G+ +
Sbjct: 380 KDRVVWNAMMVGLSMNGHAKAVFSLFSLVEKHGIRPDENTFIGLLCGCTHGGFVNEGRQF 439

Query: 434 VHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHK-SEVTWNTMISGYGLHG 492
            + + +  +   +I     ++D+  + G + EA +L + M  K + V W  ++ G  LH 
Sbjct: 440 FNNMKRVFSLTPSIEHYGCMVDLLGRAGLLNEAHQLINNMPMKPNAVVWGALLGGCKLHK 499

Query: 493 HGLEALQLFSEMLHSGIRPSG-VTFLSVLYACSH 525
               A Q+  +++      SG    LS +Y+ +H
Sbjct: 500 DTHLAEQVLKKLIELEPWNSGNYVQLSNIYSGNH 533


>gi|359489080|ref|XP_002264194.2| PREDICTED: pentatricopeptide repeat-containing protein
           At3g03580-like [Vitis vinifera]
          Length = 889

 Score =  506 bits (1302), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 268/756 (35%), Positives = 428/756 (56%), Gaps = 4/756 (0%)

Query: 29  HAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNEMP 88
           H +++  GF +DL     L      F     AR +F  +P  D+  +N +I G++ N   
Sbjct: 138 HDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYW 197

Query: 89  KSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAA 148
             ++  Y   R N  + PD++T S VL A         G ++HG     G   D+ V   
Sbjct: 198 NEALEIYYRFR-NLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNG 256

Query: 149 LVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWL 208
           L+ +Y KF+ +   R++FDKM  +D V WN+MI G  +   +++SI +F +MV       
Sbjct: 257 LLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEMVNQFKP-- 314

Query: 209 DSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLF 268
           D  ++ ++L A   + +L  G  +    +  G+         L++ Y+KCG +  ++ +F
Sbjct: 315 DLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVF 374

Query: 269 RDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLH 328
             +   D +S N+MI+ Y  NG  + +++LF+ ++ +  + +S T V L+ +    G LH
Sbjct: 375 SGMKCKDSVSWNSMINVYIQNGSFDEAMKLFK-MMKTDVKPDSVTYVMLLSMSTQLGDLH 433

Query: 329 LTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYT 388
           L   +H    K G  SN  V   L  +Y++  EM  + K+F+    + + +WN +IA   
Sbjct: 434 LGKELHCDLAKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKARDIITWNTIIASCV 493

Query: 389 QNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIY 448
            +      + +   M+   V P+  T+ SIL  C+ L A   GK +H  +     ES++ 
Sbjct: 494 HSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVP 553

Query: 449 VSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSG 508
           V   LI+MY+KCG++  + ++F LM  K  VTW  +IS  G++G G +A++ F EM  +G
Sbjct: 554 VGNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAG 613

Query: 509 IRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKA 568
           I P  V F+++++ACSH+GLV EG   F  M  D+  +P  EHYAC+VD+L R+  L+KA
Sbjct: 614 IVPDHVAFVAIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSALLDKA 673

Query: 569 LEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAE 628
            +FI  + ++P  ++WGALL AC +  DT +A   SE++ EL+P++ GY+VL+SNIY+A 
Sbjct: 674 EDFILSMPLKPDSSIWGALLSACRMSGDTEIAERVSERIIELNPDDTGYYVLVSNIYAAL 733

Query: 629 RDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKM 688
             + Q  ++R+ +K R L K PGC+ +E+    +VF +G +   Q   +  +L  L G M
Sbjct: 734 GKWDQVRSIRKSIKARGLKKDPGCSWMEIQNKVYVFGTGTKFFEQFEEVNKLLGMLAGLM 793

Query: 689 REAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCH 748
            + G+       LHD++E+EK  ++  HSE+LAIAFGL+ T+PGT ++++KNLRVC DCH
Sbjct: 794 AKEGYIANLQFVLHDIDEDEKRDILCGHSERLAIAFGLLNTKPGTPLQVMKNLRVCEDCH 853

Query: 749 TATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           T TK+ISK+  R ++VRDANRFH FK G CSCGDYW
Sbjct: 854 TVTKYISKIVQRELLVRDANRFHVFKDGACSCGDYW 889



 Score =  275 bits (704), Expect = 6e-71,   Method: Compositional matrix adjust.
 Identities = 177/581 (30%), Positives = 303/581 (52%), Gaps = 9/581 (1%)

Query: 16  LKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALF-FSIPKPDLFL 74
           L  A T +QL + H+ II  G  + +    KL  + + F+    + ++F  + P  +++L
Sbjct: 23  LASAATTTQLHKLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFRLASPSNNVYL 82

Query: 75  FNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHA 134
           +N IIR  ++N +   ++  Y+  ++   L PD +T+  V++A +   D  +   +H   
Sbjct: 83  WNSIIRALTHNGLFSEALSLYSETQR-IRLQPDTYTFPSVINACAGLLDFEMAKSIHDRV 141

Query: 135 IVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSI 194
           +  G+GSDL++G AL+D+Y +F+ +  ARKVF++MP +D V WNS+ISG   N  + +++
Sbjct: 142 LDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEAL 201

Query: 195 WVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSF 254
            ++    RN G   DS ++++VL A   +  +  G  I  L  K+G    V V  GL+S 
Sbjct: 202 EIYYRF-RNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNGLLSM 260

Query: 255 YSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTI 314
           Y K   +     +F  +V  D +S N MI GY+  G  E S++LF +++ +  + +  TI
Sbjct: 261 YCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEMV-NQFKPDLLTI 319

Query: 315 VGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSE 374
             ++      G L     +H + + SG   +++    L  +Y++   + A++++F     
Sbjct: 320 TSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKC 379

Query: 375 KSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWV 434
           K   SWN+MI  Y QNG  +EA+ LF+ M+ + V P+ VT   +LS   QLG + LGK +
Sbjct: 380 KDSVSWNSMINVYIQNGSFDEAMKLFKMMK-TDVKPDSVTYVMLLSMSTQLGDLHLGKEL 438

Query: 435 HELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHG 494
           H  +    F SNI VS  L+DMYAKCG + ++ ++F+ M  +  +TWNT+I+   +H   
Sbjct: 439 HCDLAKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKARDIITWNTIIAS-CVHSED 497

Query: 495 LE-ALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYA 553
               L++ S M   G+ P   T LS+L  CS     R+G EI    I   G +       
Sbjct: 498 CNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEI-HGCIFKLGLESDVPVGN 556

Query: 554 CMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIH 594
            ++++  + G L  + +  K L        W AL+ AC ++
Sbjct: 557 VLIEMYSKCGSLRNSFQVFK-LMKTKDVVTWTALISACGMY 596



 Score =  217 bits (553), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 134/472 (28%), Positives = 240/472 (50%), Gaps = 6/472 (1%)

Query: 130 LHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFD-KMPEKDTVLWNSMISGLMKNC 188
           LH   I  G    +   A L+  Y  F    S+  VF    P  +  LWNS+I  L  N 
Sbjct: 35  LHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFRLASPSNNVYLWNSIIRALTHNG 94

Query: 189 CFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVL 248
            F +++ ++ +  R      D+ +  +V+ A A + +  +   I    L +GF   +Y+ 
Sbjct: 95  LFSEALSLYSETQRIR-LQPDTYTFPSVINACAGLLDFEMAKSIHDRVLDMGFGSDLYIG 153

Query: 249 TGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAER 308
             L+  Y +  ++++A  +F ++   D++S N++ISGY  NG    +L ++ +       
Sbjct: 154 NALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYRFRNLGVV 213

Query: 309 VNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKL 368
            +S T+  ++      G +   + IH    K GI  +  V   L ++Y + N +   R++
Sbjct: 214 PDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNGLLSMYCKFNGLIDGRRI 273

Query: 369 FDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAI 428
           FD+   +   SWN MI GY+Q GL EE+I LF EM  ++  P+ +T++SIL AC  LG +
Sbjct: 274 FDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEM-VNQFKPDLLTITSILQACGHLGDL 332

Query: 429 SLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGY 488
             GK+VH+ + +  +E +   S  LI+MYAKCGN++ ++E+F  M  K  V+WN+MI+ Y
Sbjct: 333 EFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVY 392

Query: 489 GLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPL 548
             +G   EA++LF +M+ + ++P  VT++ +L   +  G +  G E+   +    GF   
Sbjct: 393 IQNGSFDEAMKLF-KMMKTDVKPDSVTYVMLLSMSTQLGDLHLGKELHCDLAK-MGFNSN 450

Query: 549 AEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLA 600
                 +VD+  + G++  +L+  + +        W  ++ +C+  +D NL 
Sbjct: 451 IVVSNTLVDMYAKCGEMGDSLKVFENMKARD-IITWNTIIASCVHSEDCNLG 501



 Score =  162 bits (409), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 111/419 (26%), Positives = 206/419 (49%), Gaps = 18/419 (4%)

Query: 211 TSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRD 270
           +S++  L + A   +L    ++  L + LG H  V     L++ Y+   +   +  +FR 
Sbjct: 17  SSISRALASAATTTQLH---KLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFR- 72

Query: 271 IVRP--DLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLH 328
           +  P  ++   N++I   T NG    +L L+ +      + ++ T   +I          
Sbjct: 73  LASPSNNVYLWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFE 132

Query: 329 LTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYT 388
           +   IH   L  G  S+  +  AL  +Y R N+++ ARK+F+E   + + SWN++I+GY 
Sbjct: 133 MAKSIHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYN 192

Query: 389 QNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIY 448
            NG   EA+ ++   +   V P+  T+SS+L AC  LG++  G  +H L++    + ++ 
Sbjct: 193 ANGYWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVI 252

Query: 449 VSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSG 508
           V+  L+ MY K   +++ R +FD M  +  V+WNTMI GY   G   E+++LF EM++  
Sbjct: 253 VNNGLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEMVNQ- 311

Query: 509 IRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKA 568
            +P  +T  S+L AC H G +  G  +   MI   G++        ++++  + G L  +
Sbjct: 312 FKPDLLTITSILQACGHLGDLEFGKYVHDYMI-TSGYECDTTASNILINMYAKCGNLLAS 370

Query: 569 LEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFEL-----DPENVGYHVLLS 622
            E   G+  +   + W +++   +     N +   + KLF++      P++V Y +LLS
Sbjct: 371 QEVFSGMKCKDSVS-WNSMINVYI----QNGSFDEAMKLFKMMKTDVKPDSVTYVMLLS 424


>gi|57899529|dbj|BAD87043.1| vegetative storage protein-like [Oryza sativa Japonica Group]
          Length = 698

 Score =  506 bits (1302), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 273/693 (39%), Positives = 408/693 (58%), Gaps = 12/693 (1%)

Query: 104 LTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSAR 163
           + P+N+T+ F L A SA  D   G  +H HAI +G  +DLFV  AL+D+Y K + +  A 
Sbjct: 6   VAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAA 65

Query: 164 KVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDM-VRNGGTWLDSTSVAAVLPAVAE 222
            +F  MP +D V WN+M++G   +  +  ++     M ++      +++++ A+LP +A+
Sbjct: 66  HIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQ 125

Query: 223 VQELRLGMEIQCLGLKLGFH----------DHVYVLTGLVSFYSKCGEVERAELLFRDIV 272
              L  G  +    ++   H          D V + T L+  Y+KCG +  A  +F  + 
Sbjct: 126 QGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMP 185

Query: 273 RPDLISCNAMISGYTCNGKTESSLRLFRQLLASAE-RVNSSTIVGLIPVFYPFGHLHLTN 331
             + ++ +A+I G+    +   +  LF+ +LA     ++ ++I   +       HL +  
Sbjct: 186 ARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGE 245

Query: 332 CIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNG 391
            +H+   KSG+ ++ +   +L ++Y++   ++ A  LFDE + K   S++A+++GY QNG
Sbjct: 246 QLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNG 305

Query: 392 LTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVST 451
             EEA  +F++MQA  V P+  T+ S++ AC+ L A+  G+  H  V  R   S   +  
Sbjct: 306 RAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICN 365

Query: 452 ALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRP 511
           ALIDMYAKCG I  +R++F++M  +  V+WNTMI+GYG+HG G EA  LF EM + G  P
Sbjct: 366 ALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPP 425

Query: 512 SGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEF 571
            GVTF+ +L ACSH+GLV EG   F  M H +G  P  EHY CMVD+L R G L++A EF
Sbjct: 426 DGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEAYEF 485

Query: 572 IKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDY 631
           I+ + +     VW ALLGAC ++K+ +L +  S  + EL PE  G  VLLSNIYSA   +
Sbjct: 486 IQSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSAAGRF 545

Query: 632 LQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREA 691
            +AA VR + K +   K+PGC+ IE+ G+ H F  GDQ HPQS  IY  L+ +   +++ 
Sbjct: 546 DEAAEVRIIQKVQGFKKSPGCSWIEINGSLHAFVGGDQSHPQSPEIYRELDNILVGIKKL 605

Query: 692 GFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTAT 751
           G+Q +T   L D+EEEEKE  +  HSEKLAIA+G+++      I + KNLRVC DCHT  
Sbjct: 606 GYQPDTSFVLQDLEEEEKEKALICHSEKLAIAYGILSLSEDKTIFVTKNLRVCGDCHTVI 665

Query: 752 KFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           K IS V  R I+VRDANRFHHFK G CSCGD+W
Sbjct: 666 KHISLVKRRAIIVRDANRFHHFKNGQCSCGDFW 698



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 43/135 (31%), Positives = 69/135 (51%), Gaps = 2/135 (1%)

Query: 403 MQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGN 462
           M   +VAPN  T    L AC+ L     G+ +H        +++++VSTAL+DMY KC  
Sbjct: 1   MLRHRVAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCAC 60

Query: 463 IVEARELFDLMSHKSEVTWNTMISGYGLHG--HGLEALQLFSEMLHSGIRPSGVTFLSVL 520
           + +A  +F  M  +  V WN M++GY  HG  H   A  L  +M    +RP+  T +++L
Sbjct: 61  LPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALL 120

Query: 521 YACSHAGLVREGDEI 535
              +  G + +G  +
Sbjct: 121 PLLAQQGALAQGTSV 135



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 42/157 (26%), Positives = 71/157 (45%), Gaps = 1/157 (0%)

Query: 27  QTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNE 86
           Q HA +   G   DL+    L    +       A ALF  +   D   ++ ++ G+  N 
Sbjct: 246 QLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNG 305

Query: 87  MPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVG 146
             + +   +  ++    + PD  T   ++ A S       G   HG  I+ G  S+  + 
Sbjct: 306 RAEEAFLVFKKMQACN-VEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSIC 364

Query: 147 AALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISG 183
            AL+D+Y K   +  +R+VF+ MP +D V WN+MI+G
Sbjct: 365 NALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAG 401


>gi|449530632|ref|XP_004172298.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g08820-like [Cucumis sativus]
          Length = 688

 Score =  505 bits (1301), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 266/656 (40%), Positives = 379/656 (57%), Gaps = 6/656 (0%)

Query: 129 LLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNC 188
           LL  H     Y  +L +  AL      F     ++ VF ++ E +  LWN+MI GL+   
Sbjct: 39  LLRLHLDQDNYLLNLILCCAL-----DFGSTNYSKLVFSQVKEPNIFLWNTMIRGLVSKD 93

Query: 189 CFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVL 248
           CF D+I ++G M R GG   ++ ++  VL A A   ++RLG++I  L +K G+   V+V 
Sbjct: 94  CFDDAIHLYGSM-RGGGFLPNNFTIPFVLKACARKLDVRLGLKIHSLLVKAGYDHDVFVK 152

Query: 249 TGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAER 308
           T L+S Y KC   + A  +F DI   +++S  A+I+GY  +G    ++  F++LL    +
Sbjct: 153 TSLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYISSGHFREAIGAFKKLLEMGLK 212

Query: 309 VNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKL 368
            +S ++V ++      G       I  +   SG+  N  V T+L  +Y +   +E A  +
Sbjct: 213 PDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVATSLLDMYVKCGNLERANLI 272

Query: 369 FDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAI 428
           F    EK + SW+ MI GY  NGL ++A+ LF +MQ+  + P+  T+  +LSACA LGA+
Sbjct: 273 FSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKPDCYTMVGVLSACATLGAL 332

Query: 429 SLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGY 488
            LG W   L+    F SN  + TALIDMY+KCG++ +A E+F  M  K  V WN M+ G 
Sbjct: 333 DLGIWASSLMDRNEFLSNPVLGTALIDMYSKCGSVTQAWEIFTAMKKKDRVVWNAMMVGL 392

Query: 489 GLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPL 548
            ++GH      LFS +   GIRP   TF+ +L  C+H G V EG + F +M       P 
Sbjct: 393 SMNGHAKAVFSLFSLVEKHGIRPDENTFIGLLCGCTHGGFVNEGRQFFNNMKRVFSLTPS 452

Query: 549 AEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLF 608
            EHY CMVD+LGRAG L +A + I  + ++P   VWGALLG C +HKDT+LA    +KL 
Sbjct: 453 IEHYGCMVDLLGRAGLLNEAHQLINNMPMKPNAVVWGALLGGCKLHKDTHLAEQVLKKLI 512

Query: 609 ELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGD 668
           EL+P N G +V LSNIYS    + +A  +R  +K++++ K   C+ IE+ G  H F  GD
Sbjct: 513 ELEPWNSGNYVQLSNIYSGNHRWEEAEKIRSTMKEQQIQKIRACSWIEIDGIVHEFLVGD 572

Query: 669 QLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIA 728
           + H  S  IYA L++L  +++  G    T   L D+EEEEKE  +  HSEKLA+AFGLIA
Sbjct: 573 KSHWLSEKIYAKLDELGRELKAVGHVPTTEFVLFDIEEEEKEHFLGYHSEKLAVAFGLIA 632

Query: 729 TEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           + P   IR++KNLRVC DCH A K ISK+T R I++RD NRFH F  G CSC DYW
Sbjct: 633 SPPNHVIRVVKNLRVCGDCHDAIKLISKITKREIIIRDTNRFHTFIDGSCSCRDYW 688



 Score =  215 bits (547), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 147/514 (28%), Positives = 255/514 (49%), Gaps = 5/514 (0%)

Query: 15  LLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFL 74
           L  G    +QL   HA+++      D   +  +     DF +T Y++ +F  + +P++FL
Sbjct: 22  LSNGLNFFNQLKHIHARLLRLHLDQDNYLLNLILCCALDFGSTNYSKLVFSQVKEPNIFL 81

Query: 75  FNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHA 134
           +N +IRG  + +    +I  Y  +R    L P+NFT  FVL A +   D  +G+ +H   
Sbjct: 82  WNTMIRGLVSKDCFDDAIHLYGSMRGGGFL-PNNFTIPFVLKACARKLDVRLGLKIHSLL 140

Query: 135 IVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSI 194
           + +GY  D+FV  +L+ LY K      A KVFD +P+K+ V W ++I+G + +  F+++I
Sbjct: 141 VKAGYDHDVFVKTSLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYISSGHFREAI 200

Query: 195 WVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSF 254
             F  ++  G    DS S+  VL A A + +   G  I       G   +V+V T L+  
Sbjct: 201 GAFKKLLEMGLK-PDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVATSLLDM 259

Query: 255 YSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTI 314
           Y KCG +ERA L+F  +   D++S + MI GY  NG  + +L LF Q+ +   + +  T+
Sbjct: 260 YVKCGNLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKPDCYTM 319

Query: 315 VGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSE 374
           VG++      G L L     S   ++  +SN  + TAL  +YS+   +  A ++F    +
Sbjct: 320 VGVLSACATLGALDLGIWASSLMDRNEFLSNPVLGTALIDMYSKCGSVTQAWEIFTAMKK 379

Query: 375 KSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGK-W 433
           K    WNAM+ G + NG  +   SLF  ++   + P+  T   +L  C   G ++ G+ +
Sbjct: 380 KDRVVWNAMMVGLSMNGHAKAVFSLFSLVEKHGIRPDENTFIGLLCGCTHGGFVNEGRQF 439

Query: 434 VHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHK-SEVTWNTMISGYGLHG 492
            + + +  +   +I     ++D+  + G + EA +L + M  K + V W  ++ G  LH 
Sbjct: 440 FNNMKRVFSLTPSIEHYGCMVDLLGRAGLLNEAHQLINNMPMKPNAVVWGALLGGCKLHK 499

Query: 493 HGLEALQLFSEMLHSGIRPSG-VTFLSVLYACSH 525
               A Q+  +++      SG    LS +Y+ +H
Sbjct: 500 DTHLAEQVLKKLIELEPWNSGNYVQLSNIYSGNH 533


>gi|356558231|ref|XP_003547411.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
            chloroplastic-like [Glycine max]
          Length = 1135

 Score =  505 bits (1300), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 294/813 (36%), Positives = 448/813 (55%), Gaps = 50/813 (6%)

Query: 12   FLSLLKGAKTQSQL---TQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATC----YARALF 64
            F ++LK A     L    Q HA +   G     S    +A+ L +    C     AR +F
Sbjct: 333  FPAVLKAAAAVHDLCLGKQIHAHVFKFGHAPPSSVA--VANSLVNMYGKCGDLTAARQVF 390

Query: 65   FSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDR 124
              IP  D   +N +I      E  + S+  +  L  +  + P +FT   ++S A AC   
Sbjct: 391  DDIPDRDHVSWNSMIATLCRFEEWELSLHLF-RLMLSENVDPTSFT---LVSVAHACSHV 446

Query: 125  SIGVLL----HGHAIVSGYGSDL--FVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWN 178
              GV L    H + + +G   DL  +   ALV +Y +   V  A+ +F     KD V WN
Sbjct: 447  RGGVRLGKQVHAYTLRNG---DLRTYTNNALVTMYARLGRVNDAKALFGVFDGKDLVSWN 503

Query: 179  SMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLK 238
            ++IS L +N  F++++     M+ +G    D  ++A+VLPA ++++ LR+G EI C  L+
Sbjct: 504  TVISSLSQNDRFEEALMYVYLMIVDG-VRPDGVTLASVLPACSQLERLRIGREIHCYALR 562

Query: 239  LG-FHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLR 297
             G   ++ +V T LV  Y  C + ++  L+F  +VR  +   NA+++GY  N   + +LR
Sbjct: 563  NGDLIENSFVGTALVDMYCNCKQPKKGRLVFDGVVRRTVAVWNALLAGYARNEFDDQALR 622

Query: 298  LFRQLLASAERV-NSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVY 356
            LF ++++ +E   N++T   ++P             IH + +K G   +  V  AL  +Y
Sbjct: 623  LFVEMISESEFCPNATTFASVLPACVRCKVFSDKEGIHGYIVKRGFGKDKYVQNALMDMY 682

Query: 357  SRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASK--------- 407
            SR+  +E ++ +F   +++ + SWN MI G    G  ++A++L  EMQ  +         
Sbjct: 683  SRMGRVEISKTIFGRMNKRDIVSWNTMITGCIVCGRYDDALNLLHEMQRRQGEDGSDTFV 742

Query: 408  ---------VAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYA 458
                       PN VT+ ++L  CA L A+  GK +H     +    ++ V +AL+DMYA
Sbjct: 743  DYEDDGGVPFKPNSVTLMTVLPGCAALAALGKGKEIHAYAVKQKLAMDVAVGSALVDMYA 802

Query: 459  KCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSG------IRPS 512
            KCG +  A  +FD M  ++ +TWN +I  YG+HG G EAL+LF  M   G      IRP+
Sbjct: 803  KCGCLNLASRVFDQMPIRNVITWNVLIMAYGMHGKGEEALELFRIMTAGGGSNREVIRPN 862

Query: 513  GVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFI 572
             VT++++  ACSH+G+V EG  +F +M   HG +P  +HYAC+VD+LGR+G++++A E I
Sbjct: 863  EVTYIAIFAACSHSGMVDEGLHLFHTMKASHGVEPRGDHYACLVDLLGRSGRVKEAYELI 922

Query: 573  KGLAVEPGPA-VWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDY 631
              +         W +LLGAC IH+      +A++ LF L+P    ++VL+SNIYS+   +
Sbjct: 923  NTMPSNLNKVDAWSSLLGACRIHQSVEFGEIAAKHLFVLEPNVASHYVLMSNIYSSAGLW 982

Query: 632  LQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREA 691
             QA  VR+ +K+  + K PGC+ IE G   H F SGD  HPQS  ++  LE L+ +MR+ 
Sbjct: 983  DQALGVRKKMKEMGVRKEPGCSWIEHGDEVHKFLSGDASHPQSKELHEYLETLSQRMRKE 1042

Query: 692  GFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTAT 751
            G+  +    LH+V++EEKE M+  HSE+LAIAFGL+ T PGT IR+ KNLRVC DCH AT
Sbjct: 1043 GYVPDISCVLHNVDDEEKETMLCGHSERLAIAFGLLNTPPGTTIRVAKNLRVCNDCHVAT 1102

Query: 752  KFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
            K ISK+  R I++RD  RFHHF  G CSCGDYW
Sbjct: 1103 KIISKIVDREIILRDVRRFHHFANGTCSCGDYW 1135



 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 61/239 (25%), Positives = 114/239 (47%), Gaps = 17/239 (7%)

Query: 374 EKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKW 433
            +S + W  ++   T +    +AIS +  M A+   P+     ++L A A +  + LGK 
Sbjct: 292 RRSPSQWIDLLRSQTHSSSFRDAISTYAAMLAAPAPPDNFAFPAVLKAAAAVHDLCLGKQ 351

Query: 434 VHELVKSRNF--ESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLH 491
           +H  V        S++ V+ +L++MY KCG++  AR++FD +  +  V+WN+MI+     
Sbjct: 352 IHAHVFKFGHAPPSSVAVANSLVNMYGKCGDLTAARQVFDDIPDRDHVSWNSMIATLCRF 411

Query: 492 GHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHA-GLVREGDEIFQSMIHDHGFKPLAE 550
                +L LF  ML   + P+  T +SV +ACSH  G VR G ++    + +   +    
Sbjct: 412 EEWELSLHLFRLMLSENVDPTSFTLVSVAHACSHVRGGVRLGKQVHAYTLRNGDLRTYTN 471

Query: 551 HYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFE 609
           +   +V +  R G++  A             A++G   G  ++  +T ++ ++    FE
Sbjct: 472 N--ALVTMYARLGRVNDA------------KALFGVFDGKDLVSWNTVISSLSQNDRFE 516


>gi|359490555|ref|XP_003634110.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g49142-like [Vitis vinifera]
          Length = 678

 Score =  505 bits (1300), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 255/624 (40%), Positives = 379/624 (60%), Gaps = 34/624 (5%)

Query: 161 SARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAV 220
           S R +FD++P+K+ V +N MI   + N  + D++ VF +M  +G    D  +   VL A 
Sbjct: 89  STRHIFDEIPKKNVVFFNVMIRSYVNNHLYSDALLVFKNMAGHGID-PDHYTYPCVLKAS 147

Query: 221 AEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCN 280
           +  ++L +GM+I    +++G   +V+V  GL+S Y KCG +  A  +   +   D++S N
Sbjct: 148 SGSEDLWVGMQIHAAVVRVGLDLNVFVGNGLISMYGKCGCLVEACRVLDQMPCRDVVSWN 207

Query: 281 AMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKS 340
           ++++G   NG+ + +L + +++     + ++ T+  L+P                     
Sbjct: 208 SLVAGCARNGQFDDALEVCKEMELLGLKPDAGTMASLLPA-------------------- 247

Query: 341 GIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLF 400
             V+N+            L+ +   +++F + + KSL SWN MIA Y  N +  EA+ +F
Sbjct: 248 --VTNTC-----------LDNVSFVKEMFMKLANKSLVSWNVMIAVYMNNSMPAEAVDIF 294

Query: 401 QEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKC 460
            +M+   V P+ ++++S+L AC  L A+ LG+ +HE V  +  + N+ +  ALIDMYAKC
Sbjct: 295 LQMEDHAVDPDAISIASVLPACGDLSALLLGRRIHEYVVRKRLQPNLLLENALIDMYAKC 354

Query: 461 GNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVL 520
           G +  ARE+FD M  +  V+W +MIS YG++G G +A+ LFS M   G+ P  + F+SVL
Sbjct: 355 GCLEYAREVFDQMKFRDVVSWTSMISAYGMNGKGRDAVSLFSRMQDLGLNPDSIAFVSVL 414

Query: 521 YACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPG 580
            ACSHAGL+ EG   F+ M  +    P  EH+ CMVD+LGRAGQ+++A  FIK + +EP 
Sbjct: 415 SACSHAGLLDEGRYYFKLMTEECKIVPRIEHFVCMVDLLGRAGQVDEAYGFIKQMPMEPN 474

Query: 581 PAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQV 640
             VWGALL AC ++ +  +  +A+++LF+L PE  GY+VLLSNIY+    +    TVR +
Sbjct: 475 ERVWGALLSACRVYSNMIIGLLAADQLFQLCPEQSGYYVLLSNIYAKAGRWEDVTTVRSI 534

Query: 641 VKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTA 700
           +K + + K PG +  E+    H F +GDQ HPQS  IY  L+   GKM+EAG+  ET +A
Sbjct: 535 MKTKGIKKMPGVSNFELDNRVHTFLAGDQSHPQSKQIYEELDVSVGKMKEAGYVPETDSA 594

Query: 701 LHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGR 760
           LHDVEEE+KE  + VHSEKLAIAF ++ T PG+ IRI KNLRVC DCH A K ISK+ GR
Sbjct: 595 LHDVEEEDKECHLAVHSEKLAIAFAILNTAPGSPIRITKNLRVCGDCHIAAKLISKIVGR 654

Query: 761 VIVVRDANRFHHFKGGVCSCGDYW 784
            I +RD NRFHHF  GVCSCGDYW
Sbjct: 655 EITIRDTNRFHHFYNGVCSCGDYW 678



 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 136/522 (26%), Positives = 242/522 (46%), Gaps = 45/522 (8%)

Query: 8   SRNLFLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATC----YARAL 63
           + NL   +L        L + H++I I    +DL +   L  +L    A C      R +
Sbjct: 37  TENLCGQILDKNPDIKYLKKLHSKICI---DHDLHSNPSLGIKLMRAYAVCGEPWSTRHI 93

Query: 64  FFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCD 123
           F  IPK ++  FNV+IR + NN +   ++  + ++  +  + PD++TY  VL A+S   D
Sbjct: 94  FDEIPKKNVVFFNVMIRSYVNNHLYSDALLVFKNMAGH-GIDPDHYTYPCVLKASSGSED 152

Query: 124 RSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISG 183
             +G+ +H   +  G   ++FVG  L+ +Y K   +  A +V D+MP +D V WNS+++G
Sbjct: 153 LWVGMQIHAAVVRVGLDLNVFVGNGLISMYGKCGCLVEACRVLDQMPCRDVVSWNSLVAG 212

Query: 184 LMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHD 243
             +N  F D++ V  +M    G   D+ ++A++LPAV             CL       D
Sbjct: 213 CARNGQFDDALEVCKEM-ELLGLKPDAGTMASLLPAVTNT----------CL-------D 254

Query: 244 HVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLL 303
           +       VSF  +         +F  +    L+S N MI+ Y  N     ++ +F Q+ 
Sbjct: 255 N-------VSFVKE---------MFMKLANKSLVSWNVMIAVYMNNSMPAEAVDIFLQME 298

Query: 304 ASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEME 363
             A   ++ +I  ++P       L L   IH + ++  +  N  +  AL  +Y++   +E
Sbjct: 299 DHAVDPDAISIASVLPACGDLSALLLGRRIHEYVVRKRLQPNLLLENALIDMYAKCGCLE 358

Query: 364 AARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACA 423
            AR++FD+   + + SW +MI+ Y  NG   +A+SLF  MQ   + P+ +   S+LSAC+
Sbjct: 359 YAREVFDQMKFRDVVSWTSMISAYGMNGKGRDAVSLFSRMQDLGLNPDSIAFVSVLSACS 418

Query: 424 QLGAISLGKWVHELVKSR-NFESNIYVSTALIDMYAKCGNIVEARELFDLMS-HKSEVTW 481
             G +  G++  +L+         I     ++D+  + G + EA      M    +E  W
Sbjct: 419 HAGLLDEGRYYFKLMTEECKIVPRIEHFVCMVDLLGRAGQVDEAYGFIKQMPMEPNERVW 478

Query: 482 NTMISGYGLHGHGLEALQLFSEMLHSGIRPSG-VTFLSVLYA 522
             ++S   ++ + +  L    ++       SG    LS +YA
Sbjct: 479 GALLSACRVYSNMIIGLLAADQLFQLCPEQSGYYVLLSNIYA 520



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 60/197 (30%), Positives = 102/197 (51%), Gaps = 1/197 (0%)

Query: 333 IHS-FCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNG 391
           +HS  C+   + SN S+   L   Y+   E  + R +FDE  +K++  +N MI  Y  N 
Sbjct: 57  LHSKICIDHDLHSNPSLGIKLMRAYAVCGEPWSTRHIFDEIPKKNVVFFNVMIRSYVNNH 116

Query: 392 LTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVST 451
           L  +A+ +F+ M    + P+  T   +L A +    + +G  +H  V     + N++V  
Sbjct: 117 LYSDALLVFKNMAGHGIDPDHYTYPCVLKASSGSEDLWVGMQIHAAVVRVGLDLNVFVGN 176

Query: 452 ALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRP 511
            LI MY KCG +VEA  + D M  +  V+WN++++G   +G   +AL++  EM   G++P
Sbjct: 177 GLISMYGKCGCLVEACRVLDQMPCRDVVSWNSLVAGCARNGQFDDALEVCKEMELLGLKP 236

Query: 512 SGVTFLSVLYACSHAGL 528
              T  S+L A ++  L
Sbjct: 237 DAGTMASLLPAVTNTCL 253



 Score = 47.0 bits (110), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 49/184 (26%), Positives = 74/184 (40%), Gaps = 37/184 (20%)

Query: 442 NFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLF 501
           +  SN  +   L+  YA CG     R +FD +  K+ V +N MI  Y  +    +AL +F
Sbjct: 66  DLHSNPSLGIKLMRAYAVCGEPWSTRHIFDEIPKKNVVFFNVMIRSYVNNHLYSDALLVF 125

Query: 502 SEMLHSGIRPSGVTFLSVLYACS-----------HAGLVREGDEIFQSMIHDHGFKPLAE 550
             M   GI P   T+  VL A S           HA +VR G ++  ++   +G   +  
Sbjct: 126 KNMAGHGIDPDHYTYPCVLKASSGSEDLWVGMQIHAAVVRVGLDL--NVFVGNGLISMYG 183

Query: 551 HYACMV------------DIL---------GRAGQLEKALEFIKG---LAVEPGPAVWGA 586
              C+V            D++          R GQ + ALE  K    L ++P      +
Sbjct: 184 KCGCLVEACRVLDQMPCRDVVSWNSLVAGCARNGQFDDALEVCKEMELLGLKPDAGTMAS 243

Query: 587 LLGA 590
           LL A
Sbjct: 244 LLPA 247


>gi|15237421|ref|NP_197188.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174141|sp|Q9LFL5.1|PP390_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g16860
 gi|9755687|emb|CAC01699.1| putative protein [Arabidopsis thaliana]
 gi|332004967|gb|AED92350.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 850

 Score =  504 bits (1299), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 289/819 (35%), Positives = 453/819 (55%), Gaps = 61/819 (7%)

Query: 20  KTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKAT---CYARALFFSIPKPD--LFL 74
           KT SQ+   H +++  G    + T+   +H +S + +     +A +L    P  D  ++ 
Sbjct: 39  KTISQVKLIHQKLLSFG----ILTLNLTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYH 94

Query: 75  FNVIIRGFSNNEMPKSSICFYTH-LRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGH 133
           +N +IR + +N    ++ C Y   L  + + TPDN+T+ FV  A         G   H  
Sbjct: 95  WNSLIRSYGDNGC--ANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHAL 152

Query: 134 AIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDS 193
           ++V+G+ S++FVG ALV +Y +   +  ARKVFD+M   D V WNS+I    K    + +
Sbjct: 153 SLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVA 212

Query: 194 IWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVS 253
           + +F  M    G   D+ ++  VLP  A +    LG ++ C  +      +++V   LV 
Sbjct: 213 LEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVD 272

Query: 254 FYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLF-------------- 299
            Y+KCG ++ A  +F ++   D++S NAM++GY+  G+ E ++RLF              
Sbjct: 273 MYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVT 332

Query: 300 ---------------------RQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCL 338
                                RQ+L+S  + N  T++ ++      G L     IH + +
Sbjct: 333 WSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAI 392

Query: 339 K-------SGIVSNSSVLTALSTVYSRLNEMEAARKLFDESS--EKSLASWNAMIAGYTQ 389
           K       +G    + V+  L  +Y++  +++ AR +FD  S  E+ + +W  MI GY+Q
Sbjct: 393 KYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQ 452

Query: 390 NGLTEEAISLFQEM--QASKVAPNPVTVSSILSACAQLGAISLGKWVHEL-VKSRNFESN 446
           +G   +A+ L  EM  +  +  PN  T+S  L ACA L A+ +GK +H   ++++     
Sbjct: 453 HGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVP 512

Query: 447 IYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLH 506
           ++VS  LIDMYAKCG+I +AR +FD M  K+EVTW ++++GYG+HG+G EAL +F EM  
Sbjct: 513 LFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRR 572

Query: 507 SGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLE 566
            G +  GVT L VLYACSH+G++ +G E F  M    G  P  EHYAC+VD+LGRAG+L 
Sbjct: 573 IGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLN 632

Query: 567 KALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYS 626
            AL  I+ + +EP P VW A L  C IH    L   A+EK+ EL   + G + LLSN+Y+
Sbjct: 633 AALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSNLYA 692

Query: 627 AERDYLQAATVRQVVKKRKLAKAPGCTLIE-VGGTPHVFTSGDQLHPQSTAIYAMLEKLN 685
               +     +R +++ + + K PGC+ +E + GT   F  GD+ HP +  IY +L    
Sbjct: 693 NAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTTTFFV-GDKTHPHAKEIYQVLLDHM 751

Query: 686 GKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCL 745
            ++++ G+  ET  ALHDV++EEK+ ++  HSEKLA+A+G++ T  G  IRI KNLRVC 
Sbjct: 752 QRIKDIGYVPETGFALHDVDDEEKDDLLFEHSEKLALAYGILTTPQGAAIRITKNLRVCG 811

Query: 746 DCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           DCHTA  ++S++    I++RD++RFHHFK G CSC  YW
Sbjct: 812 DCHTAFTYMSRIIDHDIILRDSSRFHHFKNGSCSCKGYW 850


>gi|356542011|ref|XP_003539465.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Glycine max]
          Length = 876

 Score =  504 bits (1299), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 282/774 (36%), Positives = 434/774 (56%), Gaps = 8/774 (1%)

Query: 13  LSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDL 72
           LS+  G+   +   Q H Q +  G  + LS    L    +        R +F  +   D+
Sbjct: 109 LSVCAGSFNGTVGEQVHCQCVKCGLVHHLSVGNSLVDMYTKTGNVRDGRRVFDEMGDRDV 168

Query: 73  FLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHG 132
             +N ++ G+S N         +  L +     PD +T S V++A +     +IG+ +H 
Sbjct: 169 VSWNSLLTGYSWNRFNDQVWELFC-LMQVEGYRPDYYTVSTVIAALANQGAVAIGMQIHA 227

Query: 133 HAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQD 192
             +  G+ ++  V  +L+ +  K   ++ AR VFD M  KD+V WNSMI+G + N    +
Sbjct: 228 LVVKLGFETERLVCNSLISMLSKSGMLRDARVVFDNMENKDSVSWNSMIAGHVINGQDLE 287

Query: 193 SIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLV 252
           +   F +M   G     +T  A+V+ + A ++EL L   + C  LK G   +  VLT L+
Sbjct: 288 AFETFNNMQLAGAKPTHAT-FASVIKSCASLKELGLVRVLHCKTLKSGLSTNQNVLTALM 346

Query: 253 SFYSKCGEVERAELLFRDIVR-PDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNS 311
              +KC E++ A  LF  +     ++S  AMISGY  NG T+ ++ LF  +     + N 
Sbjct: 347 VALTKCKEIDDAFSLFSLMHGVQSVVSWTAMISGYLQNGDTDQAVNLFSLMRREGVKPNH 406

Query: 312 STIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDE 371
            T   ++ V     H    + IH+  +K+    +SSV TAL   + ++  +  A K+F+ 
Sbjct: 407 FTYSTILTV----QHAVFISEIHAEVIKTNYEKSSSVGTALLDAFVKIGNISDAVKVFEL 462

Query: 372 SSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSAC-AQLGAISL 430
              K + +W+AM+AGY Q G TEEA  +F ++    + PN  T  SI++AC A   ++  
Sbjct: 463 IETKDVIAWSAMLAGYAQAGETEEAAKIFHQLTREGIKPNEFTFCSIINACTAPTASVEQ 522

Query: 431 GKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGL 490
           GK  H         + + VS++L+ +YAK GNI  A E+F     +  V+WN+MISGY  
Sbjct: 523 GKQFHAYAIKLRLNNALCVSSSLVTLYAKRGNIESAHEIFKRQKERDLVSWNSMISGYAQ 582

Query: 491 HGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAE 550
           HG   +AL++F EM    +    +TF+ V+ AC+HAGLV +G   F  MI+DH   P  E
Sbjct: 583 HGQAKKALEVFEEMQKRNLEVDAITFIGVISACAHAGLVGKGQNYFNIMINDHHINPTME 642

Query: 551 HYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFEL 610
           HY+CM+D+  RAG L KA++ I G+   P   VW  +L A  +H++  L ++A+EK+  L
Sbjct: 643 HYSCMIDLYSRAGMLGKAMDIINGMPFPPAATVWRIVLAASRVHRNIELGKLAAEKIISL 702

Query: 611 DPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQL 670
           +P++   +VLLSNIY+A  ++ +   VR+++ KR++ K PG + IEV    + F +GD  
Sbjct: 703 EPQHSAAYVLLSNIYAAAGNWHEKVNVRKLMDKRRVKKEPGYSWIEVKNKTYSFLAGDLS 762

Query: 671 HPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATE 730
           HP S  IY+ L +LN ++R+ G+Q +T    HD+E+E+KE ++  HSE+LAIAFGLIAT 
Sbjct: 763 HPLSDHIYSKLSELNTRLRDVGYQPDTNYVFHDIEDEQKETILSHHSERLAIAFGLIATL 822

Query: 731 PGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           P   ++I+KNLRVC DCH+  K +S V  R IVVRD+NRFHHFKGG+CSCGDYW
Sbjct: 823 PEIPLQIVKNLRVCGDCHSFIKLVSLVEKRYIVVRDSNRFHHFKGGLCSCGDYW 876



 Score =  259 bits (663), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 170/562 (30%), Positives = 289/562 (51%), Gaps = 19/562 (3%)

Query: 59  YARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAA 118
           +A+ LF   P  DL   N ++  +S  +  + ++  +  L + + L+PD++T S VLS  
Sbjct: 54  FAQQLFDQTPLRDLKQHNQLLFRYSRCDQTQEALHLFVSLYR-SGLSPDSYTMSCVLSVC 112

Query: 119 SACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWN 178
           +   + ++G  +H   +  G    L VG +LVD+Y K   V+  R+VFD+M ++D V WN
Sbjct: 113 AGSFNGTVGEQVHCQCVKCGLVHHLSVGNSLVDMYTKTGNVRDGRRVFDEMGDRDVVSWN 172

Query: 179 SMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLK 238
           S+++G   N  F D +W    +++  G   D  +V+ V+ A+A    + +GM+I  L +K
Sbjct: 173 SLLTGYSWN-RFNDQVWELFCLMQVEGYRPDYYTVSTVIAALANQGAVAIGMQIHALVVK 231

Query: 239 LGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRL 298
           LGF     V   L+S  SK G +  A ++F ++   D +S N+MI+G+  NG+   +   
Sbjct: 232 LGFETERLVCNSLISMLSKSGMLRDARVVFDNMENKDSVSWNSMIAGHVINGQDLEAFET 291

Query: 299 FRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSR 358
           F  +  +  +   +T   +I        L L   +H   LKSG+ +N +VLTAL    ++
Sbjct: 292 FNNMQLAGAKPTHATFASVIKSCASLKELGLVRVLHCKTLKSGLSTNQNVLTALMVALTK 351

Query: 359 LNEMEAARKLFD-ESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSS 417
             E++ A  LF      +S+ SW AMI+GY QNG T++A++LF  M+   V PN  T S+
Sbjct: 352 CKEIDDAFSLFSLMHGVQSVVSWTAMISGYLQNGDTDQAVNLFSLMRREGVKPNHFTYST 411

Query: 418 ILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKS 477
           IL+      A+ + +   E++K+ N+E +  V TAL+D + K GNI +A ++F+L+  K 
Sbjct: 412 ILTV---QHAVFISEIHAEVIKT-NYEKSSSVGTALLDAFVKIGNISDAVKVFELIETKD 467

Query: 478 EVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQ 537
            + W+ M++GY   G   EA ++F ++   GI+P+  TF S++ AC+      E  + F 
Sbjct: 468 VIAWSAMLAGYAQAGETEEAAKIFHQLTREGIKPNEFTFCSIINACTAPTASVEQGKQF- 526

Query: 538 SMIHDHGFKPLAEHYAC----MVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMI 593
              H +  K    +  C    +V +  + G +E A E  K    E     W +++     
Sbjct: 527 ---HAYAIKLRLNNALCVSSSLVTLYAKRGNIESAHEIFKRQK-ERDLVSWNSMISGYAQ 582

Query: 594 HKDTNLARVASEKLFELDPENV 615
           H     A+ A E   E+   N+
Sbjct: 583 HGQ---AKKALEVFEEMQKRNL 601


>gi|110736949|dbj|BAF00431.1| hypothetical protein [Arabidopsis thaliana]
          Length = 659

 Score =  504 bits (1299), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 256/630 (40%), Positives = 384/630 (60%), Gaps = 11/630 (1%)

Query: 165 VFDKMPEK-DTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEV 223
           +F++  +K D   WNS+I+ L ++    +++  F  M R    +   +S    + A + +
Sbjct: 31  LFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSM-RKLSLYPTRSSFPCAIKACSSL 89

Query: 224 QELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMI 283
            ++  G +        G+   ++V + L+  YS CG++E A  +F +I + D++S  +MI
Sbjct: 90  FDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRDIVSWTSMI 149

Query: 284 SGYTCNGKTESSLRLFRQLLASAERVNSSTIV---GLIPVFYPFGHLH---LTNCIHSFC 337
            GY  NG    ++ LF+ LL      + +  +   GL+ V      +    LT  IHSF 
Sbjct: 150 RGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFV 209

Query: 338 LKSGIVSNSSVLTALSTVYSRLNE--MEAARKLFDESSEKSLASWNAMIAGYTQNGLTEE 395
           +K G     SV   L   Y++  E  +  ARK+FD+  +K   S+N++++ Y Q+G++ E
Sbjct: 210 IKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNE 269

Query: 396 AISLFQEMQASKVAP-NPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALI 454
           A  +F+ +  +KV   N +T+S++L A +  GA+ +GK +H+ V     E ++ V T++I
Sbjct: 270 AFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSII 329

Query: 455 DMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGV 514
           DMY KCG +  AR+ FD M +K+  +W  MI+GYG+HGH  +AL+LF  M+ SG+RP+ +
Sbjct: 330 DMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYI 389

Query: 515 TFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKG 574
           TF+SVL ACSHAGL  EG   F +M    G +P  EHY CMVD+LGRAG L+KA + I+ 
Sbjct: 390 TFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQR 449

Query: 575 LAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQA 634
           + ++P   +W +LL AC IHK+  LA ++  +LFELD  N GY++LLS+IY+    +   
Sbjct: 450 MKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDV 509

Query: 635 ATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQ 694
             VR ++K R L K PG +L+E+ G  HVF  GD+ HPQ   IY  L +LN K+ EAG+ 
Sbjct: 510 ERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAGYV 569

Query: 695 TETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFI 754
           + T +  HDV+EEEKE+ ++VHSEKLAIAFG++ T PG+ + ++KNLRVC DCH   K I
Sbjct: 570 SNTSSVCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLRVCSDCHNVIKLI 629

Query: 755 SKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           SK+  R  VVRDA RFHHFK G CSCGDYW
Sbjct: 630 SKIVDREFVVRDAKRFHHFKDGGCSCGDYW 659



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 127/435 (29%), Positives = 221/435 (50%), Gaps = 11/435 (2%)

Query: 67  IPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSI 126
           + K D+F +N +I   + +     ++  ++ +RK  +L P   ++   + A S+  D   
Sbjct: 36  VDKTDVFSWNSVIADLARSGDSAEALLAFSSMRK-LSLYPTRSSFPCAIKACSSLFDIFS 94

Query: 127 GVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMK 186
           G   H  A V GY SD+FV +AL+ +Y     ++ ARKVFD++P++D V W SMI G   
Sbjct: 95  GKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRDIVSWTSMIRGYDL 154

Query: 187 NCCFQDSIWVFGDMV-----RNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGF 241
           N    D++ +F D++      +   +LDS  + +V+ A + V    L   I    +K GF
Sbjct: 155 NGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGF 214

Query: 242 HDHVYVLTGLVSFYSKCGE--VERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLF 299
              V V   L+  Y+K GE  V  A  +F  IV  D +S N+++S Y  +G +  +  +F
Sbjct: 215 DRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVF 274

Query: 300 RQLLAS-AERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSR 358
           R+L+ +     N+ T+  ++      G L +  CIH   ++ G+  +  V T++  +Y +
Sbjct: 275 RRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCK 334

Query: 359 LNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSI 418
              +E ARK FD    K++ SW AMIAGY  +G   +A+ LF  M  S V PN +T  S+
Sbjct: 335 CGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSV 394

Query: 419 LSACAQLGAISLG-KWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKS 477
           L+AC+  G    G +W + +      E  +     ++D+  + G + +A +L   M  K 
Sbjct: 395 LAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKP 454

Query: 478 E-VTWNTMISGYGLH 491
           + + W+++++   +H
Sbjct: 455 DSIIWSSLLAACRIH 469



 Score =  133 bits (334), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 122/463 (26%), Positives = 202/463 (43%), Gaps = 47/463 (10%)

Query: 27  QTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNE 86
           QTH Q  + G+Q+D+   + L    S       AR +F  IPK D+  +  +IRG+  N 
Sbjct: 97  QTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRDIVSWTSMIRGYDLNG 156

Query: 87  MPKSSICFYTHL-----RKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGS 141
               ++  +  L       + A+  D+     V+SA S    + +   +H   I  G+  
Sbjct: 157 NALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDR 216

Query: 142 DLFVGAALVDLYFKFS--WVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGD 199
            + VG  L+D Y K     V  ARK+FD++ +KD V +NS++S   ++    ++  VF  
Sbjct: 217 GVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRR 276

Query: 200 MVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCG 259
           +V+N     ++ +++ VL AV+    LR+G  I    +++G  D V V T ++  Y KCG
Sbjct: 277 LVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCG 336

Query: 260 EVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIP 319
            VE A   F  +   ++ S  AMI+GY  +G    +L LF  ++ S  R N  T V +  
Sbjct: 337 RVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSV-- 394

Query: 320 VFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLAS 379
                    L  C H+     G              +   N M+    +     E  L  
Sbjct: 395 ---------LAACSHAGLHVEG--------------WRWFNAMKGRFGV-----EPGLEH 426

Query: 380 WNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVK 439
           +  M+    + G  ++A  L Q M   K+ P+ +  SS+L+AC     + L     E+  
Sbjct: 427 YGCMVDLLGRAGFLQKAYDLIQRM---KMKPDSIIWSSLLAACRIHKNVELA----EISV 479

Query: 440 SRNFE---SNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEV 479
           +R FE   SN      L  +YA  G   +   +  +M ++  V
Sbjct: 480 ARLFELDSSNCGYYMLLSHIYADAGRWKDVERVRMIMKNRGLV 522


>gi|356557757|ref|XP_003547177.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
            chloroplastic-like [Glycine max]
          Length = 1227

 Score =  504 bits (1299), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 287/795 (36%), Positives = 441/795 (55%), Gaps = 21/795 (2%)

Query: 1    MSMKTPQSRNLFLSLLKGAKTQSQLTQ---THAQIIIHGFQNDLSTVTKLAHRLSDFKAT 57
            MS K+    N + S+L+       L +    H+ I  +G   +     KL        A 
Sbjct: 443  MSQKSELDLNAYSSILQLCAEHKCLQEGKMVHSVISSNGIPIEGVLGAKLVFMYVSCGAL 502

Query: 58   CYARALFFSIPKPD-LFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLS 116
               R +F  I   + +FL+N+++  ++     + SI  +  ++K   +T +++T+S +L 
Sbjct: 503  REGRRIFDHILSDNKVFLWNLMMSEYAKIGDYRESIYLFKKMQK-LGITGNSYTFSCILK 561

Query: 117  AASACCDRSIGVL-----LHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPE 171
                 C  ++G +     +HG     G+GS   V  +L+  YFK   V SA K+FD++ +
Sbjct: 562  -----CFATLGRVGECKRIHGCVYKLGFGSYNTVVNSLIATYFKSGEVDSAHKLFDELGD 616

Query: 172  KDTVLWNSMISGLMKNCCFQDSIWVFGDMV--RNGGTWLDSTSVAAVLPAVAEVQELRLG 229
            +D V WNSMISG + N     ++  F  M+  R G   +D  ++   + A A V  L LG
Sbjct: 617  RDVVSWNSMISGCVMNGFSHSALEFFVQMLILRVG---VDLATLVNSVAACANVGSLSLG 673

Query: 230  MEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCN 289
              +   G+K  F   V     L+  YSKCG +  A   F  + +  ++S  ++I+ Y   
Sbjct: 674  RALHGQGVKACFSREVMFNNTLLDMYSKCGNLNDAIQAFEKMGQKTVVSWTSLIAAYVRE 733

Query: 290  GKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVL 349
            G  + ++RLF ++ +     +  ++  ++        L     +H++  K+ +     V 
Sbjct: 734  GLYDDAIRLFYEMESKGVSPDVYSMTSVLHACACGNSLDKGRDVHNYIRKNNMALCLPVS 793

Query: 350  TALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVA 409
             AL  +Y++   ME A  +F +   K + SWN MI GY++N L  EA+ LF EMQ  +  
Sbjct: 794  NALMDMYAKCGSMEEAYLVFSQIPVKDIVSWNTMIGGYSKNSLPNEALKLFAEMQ-KESR 852

Query: 410  PNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEAREL 469
            P+ +T++ +L AC  L A+ +G+ +H  +    + S ++V+ ALIDMY KCG++V AR L
Sbjct: 853  PDGITMACLLPACGSLAALEIGRGIHGCILRNGYSSELHVANALIDMYVKCGSLVHARLL 912

Query: 470  FDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLV 529
            FD++  K  +TW  MISG G+HG G EA+  F +M  +GI+P  +TF S+LYACSH+GL+
Sbjct: 913  FDMIPEKDLITWTVMISGCGMHGLGNEAIATFQKMRIAGIKPDEITFTSILYACSHSGLL 972

Query: 530  REGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLG 589
             EG   F SMI +   +P  EHYACMVD+L R G L KA   I+ + ++P   +WGALL 
Sbjct: 973  NEGWGFFNSMISECNMEPKLEHYACMVDLLARTGNLSKAYNLIETMPIKPDATIWGALLC 1032

Query: 590  ACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKA 649
             C IH D  LA   +E +FEL+P+N GY+VLL+NIY+    + +   +R+ + KR L K+
Sbjct: 1033 GCRIHHDVELAEKVAEHVFELEPDNAGYYVLLANIYAEAEKWEEVKKLRERIGKRGLKKS 1092

Query: 650  PGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEK 709
            PGC+ IEV G    F S D  HPQ+ +I+++L  L  KM+  G   +   AL +  + EK
Sbjct: 1093 PGCSWIEVQGKFTTFVSADTAHPQAKSIFSLLNNLRIKMKNEGHSPKMRYALINAGDMEK 1152

Query: 710  ELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANR 769
            E+ +  HSEKLA+AFG++    G  IR+ KNLRVC DCH   KF+SK T R I++RD+NR
Sbjct: 1153 EVALCGHSEKLAMAFGILNLPSGRTIRVAKNLRVCDDCHEMAKFMSKTTRREIILRDSNR 1212

Query: 770  FHHFKGGVCSCGDYW 784
            FHHFK G CSC D+W
Sbjct: 1213 FHHFKDGFCSCRDFW 1227


>gi|224123788|ref|XP_002319164.1| predicted protein [Populus trichocarpa]
 gi|222857540|gb|EEE95087.1| predicted protein [Populus trichocarpa]
          Length = 989

 Score =  504 bits (1298), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 280/778 (35%), Positives = 436/778 (56%), Gaps = 7/778 (0%)

Query: 11  LFLSLLKGAKTQSQL----TQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFS 66
           +F S+L G  T+ +L     Q HA +  +G   +      L    S       A  +F  
Sbjct: 215 VFSSVLSGC-TKIKLFDVGEQLHALVFKYGSSLETYVCNALVTLYSRMPNFVSAEKVFSK 273

Query: 67  IPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSI 126
           +   D   FN +I G +       ++  +T ++++  L PD  T + +LSA ++      
Sbjct: 274 MQSKDEVSFNSLISGLAQQGFSDGALELFTKMKRDY-LKPDCVTVASLLSACASNGALCK 332

Query: 127 GVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMK 186
           G  LH + I +G  SD+ V  AL+DLY   S +K+A ++F     ++ VLWN M+    K
Sbjct: 333 GEQLHSYVIKAGISSDMIVEGALLDLYVNCSDIKTAHEMFLTAQTENVVLWNVMLVAFGK 392

Query: 187 NCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVY 246
                +S  +F  M +  G   +  +  ++L     V  L LG +I    +K GF  +VY
Sbjct: 393 LDNLSESFRIFRQM-QIKGLIPNQFTYPSILRTCTSVGALDLGEQIHTQVIKTGFQFNVY 451

Query: 247 VLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASA 306
           V + L+  Y+K G+++ A ++ R +   D++S  A+ISGY  +     +L+ F+++L   
Sbjct: 452 VCSVLIDMYAKHGKLDTAHVILRTLTEDDVVSWTALISGYAQHNLFAEALKHFKEMLNRG 511

Query: 307 ERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAAR 366
            + ++      I        L+    IH+    SG   + S+  AL ++Y+R   ++ A 
Sbjct: 512 IQSDNIGFSSAISACAGIQALNQGRQIHAQSYVSGYSEDLSIGNALVSLYARCGRIKEAY 571

Query: 367 KLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLG 426
             F++   K   SWN +I+G+ Q+G  E+A+ +F +M  +K+  +  T  S +SA A + 
Sbjct: 572 LEFEKIDAKDSISWNGLISGFAQSGYCEDALKVFAQMNRAKLEASFFTFGSAVSAAANIA 631

Query: 427 AISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMIS 486
            I  GK +H ++  R F+S+I VS ALI  YAKCG+I +AR  F  M  K++V+WN MI+
Sbjct: 632 NIKQGKQIHAMIIKRGFDSDIEVSNALITFYAKCGSIEDARREFCEMPEKNDVSWNAMIT 691

Query: 487 GYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFK 546
           GY  HG+G EA+ LF +M   G  P+ VTF+ VL ACSH GLV +G   F+SM  +HG  
Sbjct: 692 GYSQHGYGNEAVNLFEKMKQVGEMPNHVTFVGVLSACSHVGLVTKGLGYFESMSKEHGLV 751

Query: 547 PLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEK 606
           P   HYAC+VD++ RAG L +A +FI+ + +EP   +W  LL AC +HK+  +   A++ 
Sbjct: 752 PKPAHYACVVDLISRAGFLSRARKFIEEMPIEPDATIWRTLLSACTVHKNVEVGEFAAQH 811

Query: 607 LFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTS 666
           L EL+PE+   +VLLSN+Y+    +      RQ+++ R + K PG + IEV  + H F  
Sbjct: 812 LLELEPEDSATYVLLSNMYAVSGKWDCRDQTRQMMRNRGVKKEPGRSWIEVKNSVHAFYV 871

Query: 667 GDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGL 726
           GD+LHP +  IY  L +LN K  E G+  +  + L+DVE+E+K+  + +HSEKLAI FGL
Sbjct: 872 GDRLHPLADKIYEFLAELNKKAAEIGYFQDRYSLLNDVEQEQKDPTVYIHSEKLAITFGL 931

Query: 727 IATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           ++      I ++KNLRVC DCH+  KF+SK++ R I+VRDA RFHHF+GG+CSC DYW
Sbjct: 932 LSLSDTVPIHVMKNLRVCKDCHSWIKFVSKISNRAIIVRDAYRFHHFEGGICSCKDYW 989



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 168/603 (27%), Positives = 285/603 (47%), Gaps = 16/603 (2%)

Query: 27  QTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNE 86
           Q HA+II HG          L    +       AR +F ++   D   +  +I GFS N 
Sbjct: 133 QIHARIICHGLLCSPIISNPLIGLYAKNGLIISARKVFDNLCTKDSVSWVAMISGFSQNG 192

Query: 87  MPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDL--F 144
             + +I  +  +     + P  + +S VLS  +      +G  LH  A+V  YGS L  +
Sbjct: 193 YEEEAIHLFCEMH-TAGIFPTPYVFSSVLSGCTKIKLFDVGEQLH--ALVFKYGSSLETY 249

Query: 145 VGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNG 204
           V  ALV LY +     SA KVF KM  KD V +NS+ISGL +      ++ +F  M R+ 
Sbjct: 250 VCNALVTLYSRMPNFVSAEKVFSKMQSKDEVSFNSLISGLAQQGFSDGALELFTKMKRD- 308

Query: 205 GTWL--DSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVE 262
             +L  D  +VA++L A A    L  G ++    +K G    + V   L+  Y  C +++
Sbjct: 309 --YLKPDCVTVASLLSACASNGALCKGEQLHSYVIKAGISSDMIVEGALLDLYVNCSDIK 366

Query: 263 RAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFY 322
            A  +F      +++  N M+  +        S R+FRQ+       N  T   ++    
Sbjct: 367 TAHEMFLTAQTENVVLWNVMLVAFGKLDNLSESFRIFRQMQIKGLIPNQFTYPSILRTCT 426

Query: 323 PFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNA 382
             G L L   IH+  +K+G   N  V + L  +Y++  +++ A  +    +E  + SW A
Sbjct: 427 SVGALDLGEQIHTQVIKTGFQFNVYVCSVLIDMYAKHGKLDTAHVILRTLTEDDVVSWTA 486

Query: 383 MIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRN 442
           +I+GY Q+ L  EA+  F+EM    +  + +  SS +SACA + A++ G+ +H       
Sbjct: 487 LISGYAQHNLFAEALKHFKEMLNRGIQSDNIGFSSAISACAGIQALNQGRQIHAQSYVSG 546

Query: 443 FESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFS 502
           +  ++ +  AL+ +YA+CG I EA   F+ +  K  ++WN +ISG+   G+  +AL++F+
Sbjct: 547 YSEDLSIGNALVSLYARCGRIKEAYLEFEKIDAKDSISWNGLISGFAQSGYCEDALKVFA 606

Query: 503 EMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRA 562
           +M  + +  S  TF S + A ++   +++G +I  +MI   GF    E    ++    + 
Sbjct: 607 QMNRAKLEASFFTFGSAVSAAANIANIKQGKQI-HAMIIKRGFDSDIEVSNALITFYAKC 665

Query: 563 GQLEKA-LEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELD--PENVGYHV 619
           G +E A  EF +    E     W A++     H   N A    EK+ ++   P +V +  
Sbjct: 666 GSIEDARREFCE--MPEKNDVSWNAMITGYSQHGYGNEAVNLFEKMKQVGEMPNHVTFVG 723

Query: 620 LLS 622
           +LS
Sbjct: 724 VLS 726



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 134/477 (28%), Positives = 234/477 (49%), Gaps = 26/477 (5%)

Query: 130 LHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCC 189
           LHG  +  G+G++  +   LVD+YF    +    KVF+ MP +    W+ +ISG M+   
Sbjct: 32  LHGKILKLGFGNESVLCNKLVDVYFALGDLDGVVKVFEDMPNRSVRSWDKIISGFMEKKM 91

Query: 190 FQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQ-ELRLGMEIQCLGLKLGFHDHVYVL 248
               + +F  M+    +  +  S A+VL A +  +  +R   +I    +  G      + 
Sbjct: 92  SNRVLDLFSCMIEENVSPTE-ISFASVLRACSGHRIGIRYAEQIHARIICHGLLCSPIIS 150

Query: 249 TGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAER 308
             L+  Y+K G +  A  +F ++   D +S  AMISG++ NG  E ++ LF ++  +   
Sbjct: 151 NPLIGLYAKNGLIISARKVFDNLCTKDSVSWVAMISGFSQNGYEEEAIHLFCEMHTA--- 207

Query: 309 VNSSTIVGLIPVFYPFGHLHLTNC-----------IHSFCLKSGIVSNSSVLTALSTVYS 357
                  G+ P  Y F  + L+ C           +H+   K G    + V  AL T+YS
Sbjct: 208 -------GIFPTPYVFSSV-LSGCTKIKLFDVGEQLHALVFKYGSSLETYVCNALVTLYS 259

Query: 358 RLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSS 417
           R+    +A K+F +   K   S+N++I+G  Q G ++ A+ LF +M+   + P+ VTV+S
Sbjct: 260 RMPNFVSAEKVFSKMQSKDEVSFNSLISGLAQQGFSDGALELFTKMKRDYLKPDCVTVAS 319

Query: 418 ILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKS 477
           +LSACA  GA+  G+ +H  V      S++ V  AL+D+Y  C +I  A E+F     ++
Sbjct: 320 LLSACASNGALCKGEQLHSYVIKAGISSDMIVEGALLDLYVNCSDIKTAHEMFLTAQTEN 379

Query: 478 EVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQ 537
            V WN M+  +G   +  E+ ++F +M   G+ P+  T+ S+L  C+  G +  G++I  
Sbjct: 380 VVLWNVMLVAFGKLDNLSESFRIFRQMQIKGLIPNQFTYPSILRTCTSVGALDLGEQIHT 439

Query: 538 SMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIH 594
            +I   GF+      + ++D+  + G+L+ A   ++ L  E     W AL+     H
Sbjct: 440 QVIKT-GFQFNVYVCSVLIDMYAKHGKLDTAHVILRTL-TEDDVVSWTALISGYAQH 494



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 73/247 (29%), Positives = 128/247 (51%), Gaps = 6/247 (2%)

Query: 310 NSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLF 369
           N  T + L+ +    G L     +H   LK G  + S +   L  VY  L +++   K+F
Sbjct: 9   NCQTYIWLLDLCLNSGSLVECKKLHGKILKLGFGNESVLCNKLVDVYFALGDLDGVVKVF 68

Query: 370 DESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACA--QLGA 427
           ++   +S+ SW+ +I+G+ +  ++   + LF  M    V+P  ++ +S+L AC+  ++G 
Sbjct: 69  EDMPNRSVRSWDKIISGFMEKKMSNRVLDLFSCMIEENVSPTEISFASVLRACSGHRIG- 127

Query: 428 ISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISG 487
           I   + +H  +       +  +S  LI +YAK G I+ AR++FD +  K  V+W  MISG
Sbjct: 128 IRYAEQIHARIICHGLLCSPIISNPLIGLYAKNGLIISARKVFDNLCTKDSVSWVAMISG 187

Query: 488 YGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKP 547
           +  +G+  EA+ LF EM  +GI P+   F SVL  C+   L   G+++  +++  +G   
Sbjct: 188 FSQNGYEEEAIHLFCEMHTAGIFPTPYVFSSVLSGCTKIKLFDVGEQL-HALVFKYG--S 244

Query: 548 LAEHYAC 554
             E Y C
Sbjct: 245 SLETYVC 251



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 37/139 (26%), Positives = 68/139 (48%), Gaps = 1/139 (0%)

Query: 403 MQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGN 462
           M+   +  N  T   +L  C   G++   K +H  +    F +   +   L+D+Y   G+
Sbjct: 1   MEHRGICANCQTYIWLLDLCLNSGSLVECKKLHGKILKLGFGNESVLCNKLVDVYFALGD 60

Query: 463 IVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYA 522
           +    ++F+ M ++S  +W+ +ISG+         L LFS M+   + P+ ++F SVL A
Sbjct: 61  LDGVVKVFEDMPNRSVRSWDKIISGFMEKKMSNRVLDLFSCMIEENVSPTEISFASVLRA 120

Query: 523 CS-HAGLVREGDEIFQSMI 540
           CS H   +R  ++I   +I
Sbjct: 121 CSGHRIGIRYAEQIHARII 139


>gi|147819178|emb|CAN71462.1| hypothetical protein VITISV_018656 [Vitis vinifera]
          Length = 787

 Score =  504 bits (1297), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 284/758 (37%), Positives = 422/758 (55%), Gaps = 33/758 (4%)

Query: 29  HAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNEMP 88
           H +I+  G   DL     L +        C A  LF  +P+ +   F  +I+G++ +   
Sbjct: 61  HCEILKRGGCLDLFAWNILLNMYVKSDFLCDASKLFDEMPERNTISFVTLIQGYAESVRF 120

Query: 89  KSSICFYTHL-RKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGA 147
             +I  +  L R+   L P  FT    L  +  C +   G+  H      G+ S+ FVG 
Sbjct: 121 LEAIELFVRLHREGHELNPFVFTTILKLLVSMDCGELGWGI--HACIFKLGHESNAFVGT 178

Query: 148 ALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTW 207
           AL+D Y     V  AR+VFD +  KD V W  M++   +N CF++++ +F  M R  G  
Sbjct: 179 ALIDAYSVCGRVDVAREVFDGILYKDMVSWTGMVTCFAENDCFKEALKLFSQM-RMVGFK 237

Query: 208 LDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELL 267
            ++ + A+V  A   ++   +G  +    LK  +   +YV   L+  Y+K G+++ A   
Sbjct: 238 PNNFTFASVFKACLGLEAFDVGKSVHGCALKSRYELDLYVGVALLDLYTKSGDIDDARXA 297

Query: 268 FRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHL 327
           F +I + D+I  + MI+ Y  + +++ ++ +F Q+  +    N  T   ++        L
Sbjct: 298 FEEIPKKDVIPWSFMIARYAQSDQSKEAVEMFFQMRQALVLPNQFTFASVLQACATMEGL 357

Query: 328 HLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKS-LASWNAMIAG 386
           +L N IH   +K G+ S+  V  AL  VY++   ME +  LF ES  ++ +  WN +I G
Sbjct: 358 NLGNQIHCHVIKIGLHSDVFVSNALMDVYAKCGRMENSMXLFAESPHRNDVTPWNTVIVG 417

Query: 387 YTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESN 446
           + Q G  E+A+ LF  M   +V    VT SS L ACA L A+  G  +H L     F+ +
Sbjct: 418 HVQLGDGEKALRLFLNMLEYRVQATEVTYSSALRACASLAALEPGLQIHSLTVKTTFDKD 477

Query: 447 IYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLH 506
           I V+ ALIDMYAKCG+I +AR +FDLM+ + EV+WN MISGY +HG              
Sbjct: 478 IVVTNALIDMYAKCGSIKDARLVFDLMNKQDEVSWNAMISGYSMHG-------------- 523

Query: 507 SGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLE 566
                          AC++AGL+ +G   F SMI DHG +P  EHY CMV +LGR G L+
Sbjct: 524 --------------LACANAGLLDQGQAYFTSMIQDHGIEPCIEHYTCMVWLLGRGGHLD 569

Query: 567 KALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYS 626
           KA++ I  +  +P   VW ALLGAC+IH D  L R++++ + E++P++   HVLLSN+Y+
Sbjct: 570 KAVKLIDEIPFQPSVMVWRALLGACVIHNDIELGRISAQHVLEMEPQDKATHVLLSNMYA 629

Query: 627 AERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNG 686
             + +   A+VR+ +K++ + K PG + IE  GT H FT GD  HP+   I  MLE L+ 
Sbjct: 630 TAKRWDNVASVRKNMKRKGVKKEPGLSWIESQGTVHSFTVGDTSHPEVRVINGMLEWLHM 689

Query: 687 KMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLD 746
           K ++AG+       L DVE+EEKE ++ VHSE+LA++FG+I T  G+ IRI+KNLR+C+D
Sbjct: 690 KTKKAGYIPNYNVVLLDVEDEEKERLLWVHSERLALSFGIIRTPSGSPIRIMKNLRICVD 749

Query: 747 CHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           CH A K ISKV  R IVVRD NRFHHF+ G+CSCGDYW
Sbjct: 750 CHAAIKCISKVVQREIVVRDINRFHHFQEGLCSCGDYW 787



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 150/526 (28%), Positives = 259/526 (49%), Gaps = 14/526 (2%)

Query: 73  FLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDR---SIGVL 129
           FL     RGFS  +  K +  F  H+      +P  F      +A   C  +   S G  
Sbjct: 7   FLIRFSRRGFSV-QSAKLTQEFVGHV------SPSEFNSHAYANALQDCIQKDEPSRGKG 59

Query: 130 LHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCC 189
           LH   +  G   DLF    L+++Y K  ++  A K+FD+MPE++T+ + ++I G  ++  
Sbjct: 60  LHCEILKRGGCLDLFAWNILLNMYVKSDFLCDASKLFDEMPERNTISFVTLIQGYAESVR 119

Query: 190 FQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLT 249
           F ++I +F  + R G   L+      +L  +  +    LG  I     KLG   + +V T
Sbjct: 120 FLEAIELFVRLHREGHE-LNPFVFTTILKLLVSMDCGELGWGIHACIFKLGHESNAFVGT 178

Query: 250 GLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERV 309
            L+  YS CG V+ A  +F  I+  D++S   M++ +  N   + +L+LF Q+     + 
Sbjct: 179 ALIDAYSVCGRVDVAREVFDGILYKDMVSWTGMVTCFAENDCFKEALKLFSQMRMVGFKP 238

Query: 310 NSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLF 369
           N+ T   +           +   +H   LKS    +  V  AL  +Y++  +++ AR  F
Sbjct: 239 NNFTFASVFKACLGLEAFDVGKSVHGCALKSRYELDLYVGVALLDLYTKSGDIDDARXAF 298

Query: 370 DESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAIS 429
           +E  +K +  W+ MIA Y Q+  ++EA+ +F +M+ + V PN  T +S+L ACA +  ++
Sbjct: 299 EEIPKKDVIPWSFMIARYAQSDQSKEAVEMFFQMRQALVLPNQFTFASVLQACATMEGLN 358

Query: 430 LGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVT-WNTMISGY 488
           LG  +H  V      S+++VS AL+D+YAKCG +  +  LF    H+++VT WNT+I G+
Sbjct: 359 LGNQIHCHVIKIGLHSDVFVSNALMDVYAKCGRMENSMXLFAESPHRNDVTPWNTVIVGH 418

Query: 489 GLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPL 548
              G G +AL+LF  ML   ++ + VT+ S L AC+    +  G +I    +     K +
Sbjct: 419 VQLGDGEKALRLFLNMLEYRVQATEVTYSSALRACASLAALEPGLQIHSLTVKTTFDKDI 478

Query: 549 AEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIH 594
               A ++D+  + G ++ A   +  L  +     W A++    +H
Sbjct: 479 VVTNA-LIDMYAKCGSIKDA-RLVFDLMNKQDEVSWNAMISGYSMH 522



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 37/143 (25%), Positives = 69/143 (48%), Gaps = 4/143 (2%)

Query: 381 NAMIAGYTQNGLTEEAISLFQEMQASKVAP---NPVTVSSILSACAQLGAISLGKWVHEL 437
           N  +  +++ G + ++  L QE     V+P   N    ++ L  C Q    S GK +H  
Sbjct: 5   NNFLIRFSRRGFSVQSAKLTQEF-VGHVSPSEFNSHAYANALQDCIQKDEPSRGKGLHCE 63

Query: 438 VKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEA 497
           +  R    +++    L++MY K   + +A +LFD M  ++ +++ T+I GY      LEA
Sbjct: 64  ILKRGGCLDLFAWNILLNMYVKSDFLCDASKLFDEMPERNTISFVTLIQGYAESVRFLEA 123

Query: 498 LQLFSEMLHSGIRPSGVTFLSVL 520
           ++LF  +   G   +   F ++L
Sbjct: 124 IELFVRLHREGHELNPFVFTTIL 146


>gi|224141765|ref|XP_002324235.1| predicted protein [Populus trichocarpa]
 gi|222865669|gb|EEF02800.1| predicted protein [Populus trichocarpa]
          Length = 736

 Score =  504 bits (1297), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 262/657 (39%), Positives = 384/657 (58%), Gaps = 35/657 (5%)

Query: 162 ARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVA 221
           A  +F  +   + V+WN MI GL  +     ++  +  M+ + GT  +  +  ++  +  
Sbjct: 81  ALSLFKTIRNPNHVIWNHMIRGLSSSESPFLALEYYVHMI-SSGTEPNEYTFPSIFKSCT 139

Query: 222 EVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAEL--------------- 266
           +++    G ++    LKLG   + +V T L++ Y++ GE+  A L               
Sbjct: 140 KIRGAHEGKQVHAHVLKLGLEHNAFVHTSLINMYAQNGELVNARLVFDKSSMRDAVSFTA 199

Query: 267 ----------------LFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVN 310
                           LF +I   D++S NAMISGY  +G+ E ++  F ++  +    N
Sbjct: 200 LITGYASKGFLDEARELFDEIPVRDVVSWNAMISGYAQSGRVEEAMAFFEEMRRAKVTPN 259

Query: 311 SSTIVGLIPVFYPFGH-LHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLF 369
            ST++ ++      G  L L N + S+    G+ SN  ++  L  +Y +  ++E A  LF
Sbjct: 260 VSTMLSVLSACAQSGSSLQLGNWVRSWIEDRGLGSNIRLVNGLIDMYVKCGDLEEASNLF 319

Query: 370 DESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAIS 429
           ++  +K++ SWN MI GYT     +EA+ LF+ M  S + PN VT  SIL ACA LGA+ 
Sbjct: 320 EKIQDKNVVSWNVMIGGYTHMSCYKEALGLFRRMMQSNIDPNDVTFLSILPACANLGALD 379

Query: 430 LGKWVHELVKS--RNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISG 487
           LGKWVH  V    ++ ++ + + T+LIDMYAKCG++  A+ +FD M+ KS  TWN MISG
Sbjct: 380 LGKWVHAYVDKNMKSMKNTVALWTSLIDMYAKCGDLAVAKRIFDCMNTKSLATWNAMISG 439

Query: 488 YGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKP 547
           + +HGH   AL LFS M   G  P  +TF+ VL AC HAGL+  G   F SMI D+   P
Sbjct: 440 FAMHGHTDTALGLFSRMTSEGFVPDDITFVGVLTACKHAGLLSLGRRYFSSMIQDYKVSP 499

Query: 548 LAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKL 607
              HY CM+D+ GRAG  ++A   +K + ++P  A+W +LLGAC IH+   LA   ++ L
Sbjct: 500 KLPHYGCMIDLFGRAGLFDEAETLVKNMEMKPDGAIWCSLLGACRIHRRIELAESVAKHL 559

Query: 608 FELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSG 667
           FEL+PEN   +VLLSNIY+    +   A +R  +   ++ K PGC+ IEV    H F  G
Sbjct: 560 FELEPENPSAYVLLSNIYAGAGRWEDVAKIRTRLNDNRMKKVPGCSSIEVDSVVHEFLVG 619

Query: 668 DQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLI 727
           D++HPQS  IY ML++++ ++ +AGF  +T   L+D++EE KE ++  HSEKLAIAFGLI
Sbjct: 620 DKVHPQSNEIYKMLDEIDMRLEKAGFVPDTSEVLYDMDEEWKEGVLSHHSEKLAIAFGLI 679

Query: 728 ATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           +T+PGT IRI+KNLRVC +CH+ATK ISK+  R I+ RD NRFHHFK G CSC DYW
Sbjct: 680 STKPGTTIRIMKNLRVCGNCHSATKLISKIFNREIIARDRNRFHHFKDGSCSCKDYW 736



 Score =  209 bits (531), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 148/550 (26%), Positives = 272/550 (49%), Gaps = 43/550 (7%)

Query: 13  LSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAH--RLSDFKATCYARALFFSIPKP 70
           L+LL   KT   L Q H+QII  G  N    ++KL     +S      YA +LF +I  P
Sbjct: 32  LTLLSNCKTLQTLKQIHSQIIKTGLHNTHFALSKLIEFCAVSPHGDLSYALSLFKTIRNP 91

Query: 71  DLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLL 130
           +  ++N +IRG S++E P  ++ +Y H+  ++   P+ +T+  +  + +       G  +
Sbjct: 92  NHVIWNHMIRGLSSSESPFLALEYYVHM-ISSGTEPNEYTFPSIFKSCTKIRGAHEGKQV 150

Query: 131 HGHAIVSGYGSDLFVGAALVDLY------------FKFS-------------------WV 159
           H H +  G   + FV  +L+++Y            F  S                   ++
Sbjct: 151 HAHVLKLGLEHNAFVHTSLINMYAQNGELVNARLVFDKSSMRDAVSFTALITGYASKGFL 210

Query: 160 KSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPA 219
             AR++FD++P +D V WN+MISG  ++   ++++  F +M R   T  + +++ +VL A
Sbjct: 211 DEARELFDEIPVRDVVSWNAMISGYAQSGRVEEAMAFFEEMRRAKVT-PNVSTMLSVLSA 269

Query: 220 VAEV-QELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLIS 278
            A+    L+LG  ++      G   ++ ++ GL+  Y KCG++E A  LF  I   +++S
Sbjct: 270 CAQSGSSLQLGNWVRSWIEDRGLGSNIRLVNGLIDMYVKCGDLEEASNLFEKIQDKNVVS 329

Query: 279 CNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCL 338
            N MI GYT     + +L LFR+++ S    N  T + ++P     G L L   +H++  
Sbjct: 330 WNVMIGGYTHMSCYKEALGLFRRMMQSNIDPNDVTFLSILPACANLGALDLGKWVHAYVD 389

Query: 339 KS--GIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEA 396
           K+   + +  ++ T+L  +Y++  ++  A+++FD  + KSLA+WNAMI+G+  +G T+ A
Sbjct: 390 KNMKSMKNTVALWTSLIDMYAKCGDLAVAKRIFDCMNTKSLATWNAMISGFAMHGHTDTA 449

Query: 397 ISLFQEMQASKVAPNPVTVSSILSACAQLGAISLG-KWVHELVKSRNFESNIYVSTALID 455
           + LF  M +    P+ +T   +L+AC   G +SLG ++   +++       +     +ID
Sbjct: 450 LGLFSRMTSEGFVPDDITFVGVLTACKHAGLLSLGRRYFSSMIQDYKVSPKLPHYGCMID 509

Query: 456 MYAKCGNIVEARELFDLMSHKSE-VTWNTMISGYGLHGHGLEALQLFSEMLH--SGIRPS 512
           ++ + G   EA  L   M  K +   W +++    +H   +E  +  ++ L       PS
Sbjct: 510 LFGRAGLFDEAETLVKNMEMKPDGAIWCSLLGACRIH-RRIELAESVAKHLFELEPENPS 568

Query: 513 GVTFLSVLYA 522
               LS +YA
Sbjct: 569 AYVLLSNIYA 578



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 136/442 (30%), Positives = 212/442 (47%), Gaps = 45/442 (10%)

Query: 217 LPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSF--YSKCGEVERAELLFRDIVRP 274
           L  ++  + L+   +I    +K G H+  + L+ L+ F   S  G++  A  LF+ I  P
Sbjct: 32  LTLLSNCKTLQTLKQIHSQIIKTGLHNTHFALSKLIEFCAVSPHGDLSYALSLFKTIRNP 91

Query: 275 DLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIH 334
           + +  N MI G + +     +L  +  +++S    N  T   +          H    +H
Sbjct: 92  NHVIWNHMIRGLSSSESPFLALEYYVHMISSGTEPNEYTFPSIFKSCTKIRGAHEGKQVH 151

Query: 335 SFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSE-------------------- 374
           +  LK G+  N+ V T+L  +Y++  E+  AR +FD+SS                     
Sbjct: 152 AHVLKLGLEHNAFVHTSLINMYAQNGELVNARLVFDKSSMRDAVSFTALITGYASKGFLD 211

Query: 375 -----------KSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACA 423
                      + + SWNAMI+GY Q+G  EEA++ F+EM+ +KV PN  T+ S+LSACA
Sbjct: 212 EARELFDEIPVRDVVSWNAMISGYAQSGRVEEAMAFFEEMRRAKVTPNVSTMLSVLSACA 271

Query: 424 QLG-AISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWN 482
           Q G ++ LG WV   ++ R   SNI +   LIDMY KCG++ EA  LF+ +  K+ V+WN
Sbjct: 272 QSGSSLQLGNWVRSWIEDRGLGSNIRLVNGLIDMYVKCGDLEEASNLFEKIQDKNVVSWN 331

Query: 483 TMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHD 542
            MI GY       EAL LF  M+ S I P+ VTFLS+L AC++ G +  G  +   +  D
Sbjct: 332 VMIGGYTHMSCYKEALGLFRRMMQSNIDPNDVTFLSILPACANLGALDLGKWVHAYV--D 389

Query: 543 HGFKPLAEHYA---CMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNL 599
              K +    A    ++D+  + G L  A      +  +   A W A++    +H  T+ 
Sbjct: 390 KNMKSMKNTVALWTSLIDMYAKCGDLAVAKRIFDCMNTK-SLATWNAMISGFAMHGHTDT 448

Query: 600 A-----RVASEKLFELDPENVG 616
           A     R+ SE     D   VG
Sbjct: 449 ALGLFSRMTSEGFVPDDITFVG 470


>gi|225423499|ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Vitis vinifera]
          Length = 738

 Score =  504 bits (1297), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 275/691 (39%), Positives = 397/691 (57%), Gaps = 39/691 (5%)

Query: 130 LHGHAIVSGYGSDLFVGAALVDL--YFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKN 187
           +H   I +G  +  F  + L++      F  +  A  +F+ + + +  +WN+MI G   N
Sbjct: 51  IHSQIIKTGLHNTQFALSKLIEFCAISPFGNLSYALLLFESIEQPNQFIWNTMIRG---N 107

Query: 188 CCFQDSIWVFGDMVRN--GGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHV 245
                 +      VR    G   +S +   +L + A+V   + G +I    LKLG     
Sbjct: 108 SLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGATQEGKQIHGHVLKLGLESDP 167

Query: 246 YVLTGLVSFYSKCGEVERAEL-------------------------------LFRDIVRP 274
           +V T L++ Y++ GE+  AEL                               LF +I   
Sbjct: 168 FVHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALITGYTLRGCLDDARRLFEEIPVR 227

Query: 275 DLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIH 334
           D +S NAMI+GY  +G+ E +L  F+++  +    N ST+V ++      G L L N + 
Sbjct: 228 DAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSACAQSGSLELGNWVR 287

Query: 335 SFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTE 394
           S+    G+ SN  ++ AL  +YS+  +++ AR LF+   EK + SWN MI GY+     +
Sbjct: 288 SWIEDHGLGSNLRLVNALIDMYSKCGDLDKARDLFEGICEKDIISWNVMIGGYSHMNSYK 347

Query: 395 EAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFE-SNIYVSTAL 453
           EA++LF++MQ S V PN VT  SIL ACA LGA+ LGKW+H  +  +    +N  + T+L
Sbjct: 348 EALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYIDKKFLGLTNTSLWTSL 407

Query: 454 IDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSG 513
           IDMYAKCGNI  A+++F  M  KS  +WN MISG  +HGH   AL+LF +M   G  P  
Sbjct: 408 IDMYAKCGNIEAAKQVFAGMKPKSLGSWNAMISGLAMHGHANMALELFRQMRDEGFEPDD 467

Query: 514 VTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIK 573
           +TF+ VL ACSHAGLV  G + F SM+ D+   P  +HY CM+D+LGRAG  ++A   +K
Sbjct: 468 ITFVGVLSACSHAGLVELGRQCFSSMVEDYDISPKLQHYGCMIDLLGRAGLFDEAEALMK 527

Query: 574 GLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQ 633
            + ++P  A+WG+LLGAC +H +  L   A++ LFEL+PEN G +VLLSNIY+    +  
Sbjct: 528 NMEMKPDGAIWGSLLGACRVHGNVELGEFAAKHLFELEPENPGAYVLLSNIYATAGRWDD 587

Query: 634 AATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGF 693
            A +R  +  + + K PGC+ IEV    H F  GD++H QS  IY ML++++  + +AG 
Sbjct: 588 VARIRTKLNDKGMKKVPGCSSIEVDSVVHEFLVGDKVHEQSQDIYKMLDEIDQLLEKAGH 647

Query: 694 QTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKF 753
             +T   L+D++EE KE  +  HSEKLAIAFGLI+T+P T IRI+KNLRVC +CH+A K 
Sbjct: 648 VPDTSEVLYDMDEEWKEGSLSHHSEKLAIAFGLISTKPETTIRIVKNLRVCGNCHSAIKL 707

Query: 754 ISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           ISK+  R I+ RD NRFHHFK G CSC DYW
Sbjct: 708 ISKIFNREIIARDRNRFHHFKDGSCSCMDYW 738



 Score =  232 bits (592), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 154/517 (29%), Positives = 260/517 (50%), Gaps = 38/517 (7%)

Query: 13  LSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAH--RLSDFKATCYARALFFSIPKP 70
           L+LL   K+   L Q H+QII  G  N    ++KL     +S F    YA  LF SI +P
Sbjct: 36  LTLLSTCKSFQNLKQIHSQIIKTGLHNTQFALSKLIEFCAISPFGNLSYALLLFESIEQP 95

Query: 71  DLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLL 130
           + F++N +IRG S +  P  +I FY  +     + P+++T+ F+L + +       G  +
Sbjct: 96  NQFIWNTMIRGNSLSSSPVGAIDFYVRMLL-CGVEPNSYTFPFLLKSCAKVGATQEGKQI 154

Query: 131 HGHAIVSGYGSDLFVGAALVDLYFK----------FS---------------------WV 159
           HGH +  G  SD FV  +L+++Y +          FS                      +
Sbjct: 155 HGHVLKLGLESDPFVHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALITGYTLRGCL 214

Query: 160 KSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPA 219
             AR++F+++P +D V WN+MI+G  ++  F++++  F +M R      +ST V  VL A
Sbjct: 215 DDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMV-TVLSA 273

Query: 220 VAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISC 279
            A+   L LG  ++      G   ++ ++  L+  YSKCG++++A  LF  I   D+IS 
Sbjct: 274 CAQSGSLELGNWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKARDLFEGICEKDIISW 333

Query: 280 NAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLK 339
           N MI GY+     + +L LFR++  S    N  T V ++P     G L L   IH++  K
Sbjct: 334 NVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYIDK 393

Query: 340 SGI-VSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAIS 398
             + ++N+S+ T+L  +Y++   +EAA+++F     KSL SWNAMI+G   +G    A+ 
Sbjct: 394 KFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSLGSWNAMISGLAMHGHANMALE 453

Query: 399 LFQEMQASKVAPNPVTVSSILSACAQLGAISLGKW-VHELVKSRNFESNIYVSTALIDMY 457
           LF++M+     P+ +T   +LSAC+  G + LG+     +V+  +    +     +ID+ 
Sbjct: 454 LFRQMRDEGFEPDDITFVGVLSACSHAGLVELGRQCFSSMVEDYDISPKLQHYGCMIDLL 513

Query: 458 AKCGNIVEARELFDLMSHKSE-VTWNTMISGYGLHGH 493
            + G   EA  L   M  K +   W +++    +HG+
Sbjct: 514 GRAGLFDEAEALMKNMEMKPDGAIWGSLLGACRVHGN 550



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 111/410 (27%), Positives = 183/410 (44%), Gaps = 46/410 (11%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           AR LF  IP  D   +N +I G++ +   + ++ F+  +++   + P+  T   VLSA +
Sbjct: 217 ARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKR-ANVAPNESTMVTVLSACA 275

Query: 120 ACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNS 179
                 +G  +       G GS+L +  AL+D+Y K   +  AR +F+ + EKD + WN 
Sbjct: 276 QSGSLELGNWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKARDLFEGICEKDIISWNV 335

Query: 180 MISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLK- 238
           MI G      +++++ +F  M ++     D T V ++LPA A +  L LG  I     K 
Sbjct: 336 MIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFV-SILPACAYLGALDLGKWIHAYIDKK 394

Query: 239 -LGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLR 297
            LG  +   + T L+  Y+KCG +E A+ +F  +    L S NAMISG   +G    +L 
Sbjct: 395 FLGLTN-TSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSLGSWNAMISGLAMHGHANMALE 453

Query: 298 LFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYS 357
           LFRQ+       +  T VG+           L+ C H+  ++ G    SS++        
Sbjct: 454 LFRQMRDEGFEPDDITFVGV-----------LSACSHAGLVELGRQCFSSMVE------- 495

Query: 358 RLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSS 417
                       D      L  +  MI    + GL +EA +L + M+   + P+     S
Sbjct: 496 ------------DYDISPKLQHYGCMIDLLGRAGLFDEAEALMKNME---MKPDGAIWGS 540

Query: 418 ILSACAQLGAISLGKWVHELVKSRNFE--------SNIYVSTALIDMYAK 459
           +L AC   G + LG++  + +     E        SNIY +    D  A+
Sbjct: 541 LLGACRVHGNVELGEFAAKHLFELEPENPGAYVLLSNIYATAGRWDDVAR 590



 Score = 68.9 bits (167), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 63/264 (23%), Positives = 122/264 (46%), Gaps = 9/264 (3%)

Query: 35  HGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICF 94
           HG  ++L  V  L    S       AR LF  I + D+  +NV+I G+S+    K ++  
Sbjct: 293 HGLGSNLRLVNALIDMYSKCGDLDKARDLFEGICEKDIISWNVMIGGYSHMNSYKEALAL 352

Query: 95  YTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYG-SDLFVGAALVDLY 153
           +  ++++  + P++ T+  +L A +      +G  +H +      G ++  +  +L+D+Y
Sbjct: 353 FRKMQQSN-VEPNDVTFVSILPACAYLGALDLGKWIHAYIDKKFLGLTNTSLWTSLIDMY 411

Query: 154 FKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSV 213
            K   +++A++VF  M  K    WN+MISGL  +     ++ +F  M R+ G   D  + 
Sbjct: 412 AKCGNIEAAKQVFAGMKPKSLGSWNAMISGLAMHGHANMALELFRQM-RDEGFEPDDITF 470

Query: 214 AAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTG---LVSFYSKCGEVERAELLFRD 270
             VL A +    + LG   QC    +  +D    L     ++    + G  + AE L ++
Sbjct: 471 VGVLSACSHAGLVELGR--QCFSSMVEDYDISPKLQHYGCMIDLLGRAGLFDEAEALMKN 528

Query: 271 I-VRPDLISCNAMISGYTCNGKTE 293
           + ++PD     +++     +G  E
Sbjct: 529 MEMKPDGAIWGSLLGACRVHGNVE 552


>gi|242087005|ref|XP_002439335.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
 gi|241944620|gb|EES17765.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
          Length = 886

 Score =  503 bits (1294), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 295/856 (34%), Positives = 463/856 (54%), Gaps = 86/856 (10%)

Query: 12  FLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLA------HRLSDFKA--------- 56
           F SLLK  ++ + + Q H +II +G  +  +++  ++      H     K+         
Sbjct: 34  FASLLKECRSVNTVRQIHQKIIAYGLLSYPASLLSVSLPPLPSHSYVSPKSLGTGVVASY 93

Query: 57  -TCYARALFFSI-----PKPDLFLFNVIIRG-FSNNEMPKSSICFYTHLRKNTALTPDNF 109
             C A +   S+     P P ++ +N+++R       + ++       LR  T   PD+F
Sbjct: 94  LACGATSDALSVLERVVPSPAVW-WNLLVRAHIEEGRLDRAIGVSCRMLRAGT--KPDHF 150

Query: 110 TYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKM 169
           T  + L A         G   HG    +G+ S++FV  ALV +Y +   ++ A  VFD++
Sbjct: 151 TLPYALKACGELPSYRSGSAFHGLICCNGFESNVFVCNALVAMYSRSGSLEDASLVFDEI 210

Query: 170 PEK---DTVLWNSMISGLMKNCCFQDSIWVFGDMV-----RNGGTWLDSTSVAAVLPAVA 221
             K   D + WNS+++  +K    + ++ +F +M      +      D  S+  +LPA A
Sbjct: 211 TRKGIDDVISWNSIVAAHVKGSNPRTALDLFSEMTTIVHEKATNERSDIISIVNILPACA 270

Query: 222 EVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNA 281
            ++ L    EI    ++ G     +V   L+  Y+KCG ++ A  +F  +   D++S NA
Sbjct: 271 SLKALPQTKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMKDAVNVFNVMEFKDVVSWNA 330

Query: 282 MISGYTCNGKTESSLRLFR-----------------------------------QLLASA 306
           M++GYT +GK  ++  LF+                                   Q++   
Sbjct: 331 MVTGYTQSGKFGAAFELFKNMRKENIPLDVITWSAVIAGYAQRGYGQEALDTFQQMILYG 390

Query: 307 ERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSS------------VLTALST 354
              NS TI+ L+      G L      H++ LK  ++S  +            V  AL  
Sbjct: 391 SEPNSVTIISLLSACASLGALSQGMETHAYSLKKCLLSLDNDFGGDGDGEDLVVHNALID 450

Query: 355 VYSRLNEMEAARKLFDE--SSEKSLASWNAMIAGYTQNGLTEEAISLFQEM--QASKVAP 410
           +YS+    +AAR +F+     E+++ +W  MI GY Q G + +A+ LF EM  +   VAP
Sbjct: 451 MYSKCRSFKAARTIFNSIPRRERNVVTWTVMIGGYAQYGDSNDALKLFSEMISKPYAVAP 510

Query: 411 NPVTVSSILSACAQLGAISLGKWVHELV-KSRNFESNIY-VSTALIDMYAKCGNIVEARE 468
           N  T+S IL ACA L ++ +GK +H  V +   +ES++Y V+  LIDMY+KCG++  AR 
Sbjct: 511 NAYTISCILMACAHLSSLRMGKQIHAYVTRHHEYESSVYFVANCLIDMYSKCGDVDTARN 570

Query: 469 LFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGL 528
           +FD M  ++EV+W +M+SGYG+HG G EAL +F +M  +G  P  ++FL +LYACSH+G+
Sbjct: 571 VFDSMPKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDISFLVLLYACSHSGM 630

Query: 529 VREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALL 588
           V +G + F  M  D+G    A+HYAC++D+L R+G+L+KA + I+ + +EP  A+W ALL
Sbjct: 631 VDQGLDYFDIMRSDYGVIASAQHYACVIDLLARSGRLDKAWKTIQEMPMEPSAAIWVALL 690

Query: 589 GACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAK 648
            AC +H +  LA  A  KL  +  EN G + L+SNIY+  R +   A +RQ++KK  + K
Sbjct: 691 SACRVHSNVELAEYALNKLVSMKAENDGSYTLISNIYATARRWKDVARIRQLMKKSGIKK 750

Query: 649 APGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEE 708
            PGC+ ++       F  GD+ HP S  IY++LE+L G+++  G+  ET  ALHDV++EE
Sbjct: 751 RPGCSWVQGKKGTASFFVGDRSHPLSPEIYSLLERLIGRIKVMGYVPETNFALHDVDDEE 810

Query: 709 KELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDAN 768
           K  ++  HSEKLA+A+GL+ T PG  IRI KNLRVC DCH+A  +ISK+    I+VRD++
Sbjct: 811 KNNLLTEHSEKLALAYGLLTTSPGCPIRITKNLRVCGDCHSAFIYISKIVDHEIIVRDSS 870

Query: 769 RFHHFKGGVCSCGDYW 784
           RFHHFK G CSCG YW
Sbjct: 871 RFHHFKNGSCSCGGYW 886


>gi|145332693|ref|NP_001078212.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75274431|sp|Q9LW32.1|PP258_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g26782, mitochondrial; Flags: Precursor
 gi|9279668|dbj|BAB01225.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|332643694|gb|AEE77215.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 659

 Score =  503 bits (1294), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 255/630 (40%), Positives = 384/630 (60%), Gaps = 11/630 (1%)

Query: 165 VFDKMPEK-DTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEV 223
           +F++  +K D   WNS+I+ L ++    +++  F  M R    +   +S    + A + +
Sbjct: 31  LFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSM-RKLSLYPTRSSFPCAIKACSSL 89

Query: 224 QELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMI 283
            ++  G +        G+   ++V + L+  YS CG++E A  +F +I + +++S  +MI
Sbjct: 90  FDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMI 149

Query: 284 SGYTCNGKTESSLRLFRQLLASAERVNSSTIV---GLIPVFYPFGHLH---LTNCIHSFC 337
            GY  NG    ++ LF+ LL      + +  +   GL+ V      +    LT  IHSF 
Sbjct: 150 RGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFV 209

Query: 338 LKSGIVSNSSVLTALSTVYSRLNE--MEAARKLFDESSEKSLASWNAMIAGYTQNGLTEE 395
           +K G     SV   L   Y++  E  +  ARK+FD+  +K   S+N++++ Y Q+G++ E
Sbjct: 210 IKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNE 269

Query: 396 AISLFQEMQASKVAP-NPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALI 454
           A  +F+ +  +KV   N +T+S++L A +  GA+ +GK +H+ V     E ++ V T++I
Sbjct: 270 AFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSII 329

Query: 455 DMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGV 514
           DMY KCG +  AR+ FD M +K+  +W  MI+GYG+HGH  +AL+LF  M+ SG+RP+ +
Sbjct: 330 DMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYI 389

Query: 515 TFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKG 574
           TF+SVL ACSHAGL  EG   F +M    G +P  EHY CMVD+LGRAG L+KA + I+ 
Sbjct: 390 TFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQR 449

Query: 575 LAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQA 634
           + ++P   +W +LL AC IHK+  LA ++  +LFELD  N GY++LLS+IY+    +   
Sbjct: 450 MKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDV 509

Query: 635 ATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQ 694
             VR ++K R L K PG +L+E+ G  HVF  GD+ HPQ   IY  L +LN K+ EAG+ 
Sbjct: 510 ERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAGYV 569

Query: 695 TETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFI 754
           + T +  HDV+EEEKE+ ++VHSEKLAIAFG++ T PG+ + ++KNLRVC DCH   K I
Sbjct: 570 SNTSSVCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLRVCSDCHNVIKLI 629

Query: 755 SKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           SK+  R  VVRDA RFHHFK G CSCGDYW
Sbjct: 630 SKIVDREFVVRDAKRFHHFKDGGCSCGDYW 659



 Score =  188 bits (478), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 126/435 (28%), Positives = 221/435 (50%), Gaps = 11/435 (2%)

Query: 67  IPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSI 126
           + K D+F +N +I   + +     ++  ++ +RK  +L P   ++   + A S+  D   
Sbjct: 36  VDKTDVFSWNSVIADLARSGDSAEALLAFSSMRK-LSLYPTRSSFPCAIKACSSLFDIFS 94

Query: 127 GVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMK 186
           G   H  A V GY SD+FV +AL+ +Y     ++ ARKVFD++P+++ V W SMI G   
Sbjct: 95  GKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDL 154

Query: 187 NCCFQDSIWVFGDMV-----RNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGF 241
           N    D++ +F D++      +   +LDS  + +V+ A + V    L   I    +K GF
Sbjct: 155 NGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGF 214

Query: 242 HDHVYVLTGLVSFYSKCGE--VERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLF 299
              V V   L+  Y+K GE  V  A  +F  IV  D +S N+++S Y  +G +  +  +F
Sbjct: 215 DRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVF 274

Query: 300 RQLLAS-AERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSR 358
           R+L+ +     N+ T+  ++      G L +  CIH   ++ G+  +  V T++  +Y +
Sbjct: 275 RRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCK 334

Query: 359 LNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSI 418
              +E ARK FD    K++ SW AMIAGY  +G   +A+ LF  M  S V PN +T  S+
Sbjct: 335 CGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSV 394

Query: 419 LSACAQLGAISLG-KWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKS 477
           L+AC+  G    G +W + +      E  +     ++D+  + G + +A +L   M  K 
Sbjct: 395 LAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKP 454

Query: 478 E-VTWNTMISGYGLH 491
           + + W+++++   +H
Sbjct: 455 DSIIWSSLLAACRIH 469



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 121/463 (26%), Positives = 202/463 (43%), Gaps = 47/463 (10%)

Query: 27  QTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNE 86
           QTH Q  + G+Q+D+   + L    S       AR +F  IPK ++  +  +IRG+  N 
Sbjct: 97  QTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNG 156

Query: 87  MPKSSICFYTHL-----RKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGS 141
               ++  +  L       + A+  D+     V+SA S    + +   +H   I  G+  
Sbjct: 157 NALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDR 216

Query: 142 DLFVGAALVDLYFKFS--WVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGD 199
            + VG  L+D Y K     V  ARK+FD++ +KD V +NS++S   ++    ++  VF  
Sbjct: 217 GVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRR 276

Query: 200 MVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCG 259
           +V+N     ++ +++ VL AV+    LR+G  I    +++G  D V V T ++  Y KCG
Sbjct: 277 LVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCG 336

Query: 260 EVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIP 319
            VE A   F  +   ++ S  AMI+GY  +G    +L LF  ++ S  R N  T V +  
Sbjct: 337 RVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSV-- 394

Query: 320 VFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLAS 379
                    L  C H+     G              +   N M+    +     E  L  
Sbjct: 395 ---------LAACSHAGLHVEG--------------WRWFNAMKGRFGV-----EPGLEH 426

Query: 380 WNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVK 439
           +  M+    + G  ++A  L Q M   K+ P+ +  SS+L+AC     + L     E+  
Sbjct: 427 YGCMVDLLGRAGFLQKAYDLIQRM---KMKPDSIIWSSLLAACRIHKNVELA----EISV 479

Query: 440 SRNFE---SNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEV 479
           +R FE   SN      L  +YA  G   +   +  +M ++  V
Sbjct: 480 ARLFELDSSNCGYYMLLSHIYADAGRWKDVERVRMIMKNRGLV 522


>gi|357167843|ref|XP_003581359.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like, partial [Brachypodium distachyon]
          Length = 745

 Score =  503 bits (1294), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 247/615 (40%), Positives = 377/615 (61%)

Query: 170 PEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLG 229
           P +    +N +I   ++    +D++ +F +M+ +     D  +VA  + + + + +L +G
Sbjct: 131 PPRSARSYNILIRSFLRAGHPEDALHLFVEMLDDTAVSPDQHTVANTVKSCSRMCDLSVG 190

Query: 230 MEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCN 289
             +Q    K GF    +VL  L+  Y+ CG+V  A +LF  +    +I+ NAMI+GY  N
Sbjct: 191 RGVQAYAFKRGFMVDQFVLNSLIHMYASCGDVVAAHVLFHTVQVKGVIAWNAMIAGYVKN 250

Query: 290 GKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVL 349
           G  +  + +F+ +L      +  T++ +       G  +L   I  +  + G++ + ++ 
Sbjct: 251 GDWKEVVEMFKGMLEVRAPFDEVTLLSVATACGRLGDANLGQWIAEYAEEKGMLRSRNLA 310

Query: 350 TALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVA 409
           TAL  +Y++  E++ AR+LFD    + + +W+AMI+GYTQ+    EA+++F EMQ ++V 
Sbjct: 311 TALVDMYAKCGELDKARRLFDRMHSRDVVAWSAMISGYTQSDRCREALAIFNEMQGTEVN 370

Query: 410 PNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEAREL 469
           PN VT+ S+LSACA LGA+  GKWVH  ++ ++    + + TAL+D YAKCG I +A + 
Sbjct: 371 PNDVTMVSVLSACAVLGALETGKWVHSYIRRKDLPLTVILGTALVDFYAKCGCIKDAVKA 430

Query: 470 FDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLV 529
           F+ M  ++  TW  +I G   +G   EAL+LFS ML + I P+ VTF+ VL ACSH  LV
Sbjct: 431 FESMPVRNTWTWTALIKGMASNGRSREALELFSSMLEANIEPTDVTFIGVLLACSHGCLV 490

Query: 530 REGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLG 589
            EG   F SM  D+G  P  EHY CMVD+LGRAG +++A +FI+ + +EP   VW ALL 
Sbjct: 491 EEGRRHFTSMTQDYGICPRIEHYGCMVDLLGRAGLIDEAYQFIRNMPIEPNAVVWRALLS 550

Query: 590 ACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKA 649
           AC +HK+  +   A +++  LDP + G ++LLSN Y++   +  AA VR+ +K++ + K 
Sbjct: 551 ACTVHKNVEIGEEALKQIVPLDPCHSGNYILLSNTYASVGQWKNAAMVRKEMKEKGVEKI 610

Query: 650 PGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEK 709
           PGC+LIE+ GT   F + D  HPQ T IY  + ++   ++  G+   T  A  DV+E EK
Sbjct: 611 PGCSLIELEGTIFEFFAEDSEHPQLTEIYEKVHEMIENIKMVGYIPNTADARLDVDEYEK 670

Query: 710 ELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANR 769
           ++ +  HSEKLAIAFGL+ + PG  IR+ KNLRVC+DCH+ATK ISKV  R I+VRD NR
Sbjct: 671 QVSVSHHSEKLAIAFGLMKSRPGATIRLSKNLRVCIDCHSATKLISKVYNREIIVRDRNR 730

Query: 770 FHHFKGGVCSCGDYW 784
           FHHFK G+CSC DYW
Sbjct: 731 FHHFKDGLCSCNDYW 745



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 126/486 (25%), Positives = 226/486 (46%), Gaps = 18/486 (3%)

Query: 59  YARALFFSIPKPDLFL--FNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLS 116
           YA  LF   P P      +N++IR F     P+ ++  +  +  +TA++PD  T +  + 
Sbjct: 120 YAIRLFRLGPHPPRSARSYNILIRSFLRAGHPEDALHLFVEMLDDTAVSPDQHTVANTVK 179

Query: 117 AASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVL 176
           + S  CD S+G  +  +A   G+  D FV  +L+ +Y     V +A  +F  +  K  + 
Sbjct: 180 SCSRMCDLSVGRGVQAYAFKRGFMVDQFVLNSLIHMYASCGDVVAAHVLFHTVQVKGVIA 239

Query: 177 WNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLG 236
           WN+MI+G +KN  +++ + +F  M+     + D  ++ +V  A   + +  LG  I    
Sbjct: 240 WNAMIAGYVKNGDWKEVVEMFKGMLEVRAPF-DEVTLLSVATACGRLGDANLGQWIAEYA 298

Query: 237 LKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSL 296
            + G      + T LV  Y+KCGE+++A  LF  +   D+++ +AMISGYT + +   +L
Sbjct: 299 EEKGMLRSRNLATALVDMYAKCGELDKARRLFDRMHSRDVVAWSAMISGYTQSDRCREAL 358

Query: 297 RLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVY 356
            +F ++  +    N  T+V ++      G L     +HS+  +  +     + TAL   Y
Sbjct: 359 AIFNEMQGTEVNPNDVTMVSVLSACAVLGALETGKWVHSYIRRKDLPLTVILGTALVDFY 418

Query: 357 SRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVS 416
           ++   ++ A K F+    ++  +W A+I G   NG + EA+ LF  M  + + P  VT  
Sbjct: 419 AKCGCIKDAVKAFESMPVRNTWTWTALIKGMASNGRSREALELFSSMLEANIEPTDVTFI 478

Query: 417 SILSACAQLGAISLGKW-VHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMS- 474
            +L AC+    +  G+     + +       I     ++D+  + G I EA +    M  
Sbjct: 479 GVLLACSHGCLVEEGRRHFTSMTQDYGICPRIEHYGCMVDLLGRAGLIDEAYQFIRNMPI 538

Query: 475 HKSEVTWNTMISGYGLHGH---GLEALQLFSEM--LHSGIRPSGVTFLSVLYAC----SH 525
             + V W  ++S   +H +   G EAL+    +   HSG        LS  YA      +
Sbjct: 539 EPNAVVWRALLSACTVHKNVEIGEEALKQIVPLDPCHSG----NYILLSNTYASVGQWKN 594

Query: 526 AGLVRE 531
           A +VR+
Sbjct: 595 AAMVRK 600



 Score = 99.4 bits (246), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 96/402 (23%), Positives = 169/402 (42%), Gaps = 45/402 (11%)

Query: 36  GFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFY 95
           GF  D   +  L H  +       A  LF ++    +  +N +I G+  N   K  +  +
Sbjct: 201 GFMVDQFVLNSLIHMYASCGDVVAAHVLFHTVQVKGVIAWNAMIAGYVKNGDWKEVVEMF 260

Query: 96  THLRKNTALTPDNFTYSFVLSAASAC---CDRSIGVLLHGHAIVSGYGSDLFVGAALVDL 152
             + +  A     F    +LS A+AC    D ++G  +  +A   G      +  ALVD+
Sbjct: 261 KGMLEVRA----PFDEVTLLSVATACGRLGDANLGQWIAEYAEEKGMLRSRNLATALVDM 316

Query: 153 YFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTS 212
           Y K   +  AR++FD+M  +D V W++MISG  ++   ++++ +F +M    GT ++   
Sbjct: 317 YAKCGELDKARRLFDRMHSRDVVAWSAMISGYTQSDRCREALAIFNEM---QGTEVNPND 373

Query: 213 VA--AVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRD 270
           V   +VL A A +  L  G  +     +      V + T LV FY+KCG ++ A   F  
Sbjct: 374 VTMVSVLSACAVLGALETGKWVHSYIRRKDLPLTVILGTALVDFYAKCGCIKDAVKAFES 433

Query: 271 IVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLT 330
           +   +  +  A+I G   NG++  +L LF  +L +       T +G+           L 
Sbjct: 434 MPVRNTWTWTALIKGMASNGRSREALELFSSMLEANIEPTDVTFIGV-----------LL 482

Query: 331 NCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQN 390
            C H   ++ G        T+++  Y     +E                +  M+    + 
Sbjct: 483 ACSHGCLVEEG----RRHFTSMTQDYGICPRIE---------------HYGCMVDLLGRA 523

Query: 391 GLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGK 432
           GL +EA    + M    + PN V   ++LSAC     + +G+
Sbjct: 524 GLIDEAYQFIRNM---PIEPNAVVWRALLSACTVHKNVEIGE 562


>gi|328774751|gb|AEB39775.1| pentatricopeptide repeat protein 71 [Funaria hygrometrica]
          Length = 837

 Score =  503 bits (1294), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 283/767 (36%), Positives = 419/767 (54%), Gaps = 9/767 (1%)

Query: 18  GAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNV 77
           G + +  + Q+  Q+ I+    +L+T+ KL     +      AR  F S+    +  +N 
Sbjct: 80  GKQVRDHIIQSGRQLNIY----ELNTLIKLHSICGNM---LEARQTFDSVENKTVVTWNA 132

Query: 78  IIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVS 137
           II G++     K +   +  +  + A+ P   T+  VL A S+     +G   H   I  
Sbjct: 133 IIAGYAQLGHVKEAFALFRQM-VDEAMEPSIITFLIVLDACSSPAGLKLGKEFHAQVIKV 191

Query: 138 GYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVF 197
           G+ SD  +G ALV +Y K   +  AR+VFD + ++D   +N MI G  K+   + +  +F
Sbjct: 192 GFVSDFRIGTALVSMYVKGGSMDGARQVFDGLYKRDVSTFNVMIGGYAKSGDGEKAFQLF 251

Query: 198 GDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSK 257
             M + G    +  S  ++L   +  + L  G  +    +  G  D V V T L+  Y  
Sbjct: 252 YRMQQEGFK-PNRISFLSILDGCSTPEALAWGKAVHAQCMNTGLVDDVRVATALIRMYMG 310

Query: 258 CGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGL 317
           CG +E A  +F  +   D++S   MI GY  N   E +  LF  +     + +  T + +
Sbjct: 311 CGSIEGARRVFDKMKVRDVVSWTVMIRGYAENSNIEDAFGLFATMQEEGIQPDRITYIHI 370

Query: 318 IPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSL 377
           I        L L   IHS  +++G  ++  V TAL  +Y++   ++ AR++FD  S + +
Sbjct: 371 INACASSADLSLAREIHSQVVRAGFGTDLLVDTALVHMYAKCGAIKDARQVFDAMSRRDV 430

Query: 378 ASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHEL 437
            SW+AMI  Y +NG  EEA   F  M+ + V P+ VT  ++L+AC  LGA+ LG  ++  
Sbjct: 431 VSWSAMIGAYVENGCGEEAFETFHLMKRNNVEPDVVTYINLLNACGHLGALDLGMEIYTQ 490

Query: 438 VKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEA 497
               +  S+I V  ALI+M  K G+I  AR +F+ M  +  VTWN MI GY LHG+  EA
Sbjct: 491 AIKADLVSHIPVGNALINMNVKHGSIERARYIFENMVQRDVVTWNVMIGGYSLHGNAREA 550

Query: 498 LQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVD 557
           L LF  ML    RP+ VTF+ VL ACS AG V EG   F  ++   G  P  E Y CMVD
Sbjct: 551 LDLFDRMLKERFRPNSVTFVGVLSACSRAGFVEEGRRFFSYLLDGRGIVPTMELYGCMVD 610

Query: 558 ILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGY 617
           +LGRAG+L++A   I  + ++P  ++W  LL AC I+ + ++A  A+E+    +P +   
Sbjct: 611 LLGRAGELDEAELLINRMPLKPNSSIWSTLLAACRIYGNLDVAERAAERCLMSEPYDGAV 670

Query: 618 HVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAI 677
           +V LS++Y+A   +   A VR+V++ R + K  GCT IEV G  H F   D+ HPQ+  I
Sbjct: 671 YVQLSHMYAAAGMWENVAKVRKVMESRGVRKEQGCTWIEVEGKLHTFVVEDRSHPQAGEI 730

Query: 678 YAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRI 737
           YA L +L   ++  G+   T   LH+V E+EKE  +  HSEKLAIA+G+++   G  IRI
Sbjct: 731 YAELARLMTAIKREGYIPVTQNVLHNVGEQEKEEAISYHSEKLAIAYGVLSLPSGAPIRI 790

Query: 738 IKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
            KNLRVC DCH+A+KFISKVTGR I+ RDA+RFHHFK GVCSCGDYW
Sbjct: 791 FKNLRVCGDCHSASKFISKVTGREIIARDASRFHHFKNGVCSCGDYW 837



 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 147/521 (28%), Positives = 255/521 (48%), Gaps = 11/521 (2%)

Query: 107 DNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVF 166
           D+ TY  +        D  +G  +  H I SG   +++    L+ L+     +  AR+ F
Sbjct: 60  DSRTYVKLFQRCMMLRDAGLGKQVRDHIIQSGRQLNIYELNTLIKLHSICGNMLEARQTF 119

Query: 167 DKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQEL 226
           D +  K  V WN++I+G  +    +++  +F  MV +        +   VL A +    L
Sbjct: 120 DSVENKTVVTWNAIIAGYAQLGHVKEAFALFRQMV-DEAMEPSIITFLIVLDACSSPAGL 178

Query: 227 RLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGY 286
           +LG E     +K+GF     + T LVS Y K G ++ A  +F  + + D+ + N MI GY
Sbjct: 179 KLGKEFHAQVIKVGFVSDFRIGTALVSMYVKGGSMDGARQVFDGLYKRDVSTFNVMIGGY 238

Query: 287 TCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNS 346
             +G  E + +LF ++     + N  + + ++        L     +H+ C+ +G+V + 
Sbjct: 239 AKSGDGEKAFQLFYRMQQEGFKPNRISFLSILDGCSTPEALAWGKAVHAQCMNTGLVDDV 298

Query: 347 SVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQAS 406
            V TAL  +Y     +E AR++FD+   + + SW  MI GY +N   E+A  LF  MQ  
Sbjct: 299 RVATALIRMYMGCGSIEGARRVFDKMKVRDVVSWTVMIRGYAENSNIEDAFGLFATMQEE 358

Query: 407 KVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEA 466
            + P+ +T   I++ACA    +SL + +H  V    F +++ V TAL+ MYAKCG I +A
Sbjct: 359 GIQPDRITYIHIINACASSADLSLAREIHSQVVRAGFGTDLLVDTALVHMYAKCGAIKDA 418

Query: 467 RELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHA 526
           R++FD MS +  V+W+ MI  Y  +G G EA + F  M  + + P  VT++++L AC H 
Sbjct: 419 RQVFDAMSRRDVVSWSAMIGAYVENGCGEEAFETFHLMKRNNVEPDVVTYINLLNACGHL 478

Query: 527 GLVREGDEIFQSMIHDHGFKPLAEHYA---CMVDILGRAGQLEKALEFIKGLAVEPGPAV 583
           G +  G EI+   I       L  H      ++++  + G +E+A    + + V+     
Sbjct: 479 GALDLGMEIYTQAIK----ADLVSHIPVGNALINMNVKHGSIERARYIFENM-VQRDVVT 533

Query: 584 WGALLGACMIHKDTNLARVASEKLFE--LDPENVGYHVLLS 622
           W  ++G   +H +   A    +++ +    P +V +  +LS
Sbjct: 534 WNVMIGGYSLHGNAREALDLFDRMLKERFRPNSVTFVGVLS 574



 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 108/387 (27%), Positives = 194/387 (50%), Gaps = 2/387 (0%)

Query: 204 GGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVER 263
           G   +DS +   +      +++  LG +++   ++ G   ++Y L  L+  +S CG +  
Sbjct: 55  GSNHIDSRTYVKLFQRCMMLRDAGLGKQVRDHIIQSGRQLNIYELNTLIKLHSICGNMLE 114

Query: 264 AELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYP 323
           A   F  +    +++ NA+I+GY   G  + +  LFRQ++  A   +  T + ++     
Sbjct: 115 ARQTFDSVENKTVVTWNAIIAGYAQLGHVKEAFALFRQMVDEAMEPSIITFLIVLDACSS 174

Query: 324 FGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAM 383
              L L    H+  +K G VS+  + TAL ++Y +   M+ AR++FD   ++ ++++N M
Sbjct: 175 PAGLKLGKEFHAQVIKVGFVSDFRIGTALVSMYVKGGSMDGARQVFDGLYKRDVSTFNVM 234

Query: 384 IAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNF 443
           I GY ++G  E+A  LF  MQ     PN ++  SIL  C+   A++ GK VH    +   
Sbjct: 235 IGGYAKSGDGEKAFQLFYRMQQEGFKPNRISFLSILDGCSTPEALAWGKAVHAQCMNTGL 294

Query: 444 ESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSE 503
             ++ V+TALI MY  CG+I  AR +FD M  +  V+W  MI GY  + +  +A  LF+ 
Sbjct: 295 VDDVRVATALIRMYMGCGSIEGARRVFDKMKVRDVVSWTVMIRGYAENSNIEDAFGLFAT 354

Query: 504 MLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAG 563
           M   GI+P  +T++ ++ AC+ +  +    EI  S +   GF         +V +  + G
Sbjct: 355 MQEEGIQPDRITYIHIINACASSADLSLAREI-HSQVVRAGFGTDLLVDTALVHMYAKCG 413

Query: 564 QLEKALEFIKGLAVEPGPAVWGALLGA 590
            ++ A +    ++       W A++GA
Sbjct: 414 AIKDARQVFDAMS-RRDVVSWSAMIGA 439


>gi|147845321|emb|CAN83351.1| hypothetical protein VITISV_028907 [Vitis vinifera]
          Length = 948

 Score =  503 bits (1294), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 266/756 (35%), Positives = 428/756 (56%), Gaps = 4/756 (0%)

Query: 29  HAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNEMP 88
           H +++  GF +DL     L      F     AR +F  +P  D+  +N +I G++ N   
Sbjct: 197 HDRVLXMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYW 256

Query: 89  KSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAA 148
             ++  Y   R N  + PD++T S VL A         G ++HG     G   D+ V   
Sbjct: 257 NEALEIYYRFR-NLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNG 315

Query: 149 LVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWL 208
           L+ +Y KF+ +   R++FDKM  +D V WN+MI G  +   +++SI +F +MV       
Sbjct: 316 LLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEMVNQFKP-- 373

Query: 209 DSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLF 268
           D  ++ ++L A   + +L  G  +    +  G+         L++ Y+KCG +  ++ +F
Sbjct: 374 DLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVF 433

Query: 269 RDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLH 328
             +   D +S N+MI+ Y  NG  + +++LF+ ++ +  + +S T V L+ +    G L 
Sbjct: 434 SGMKCKDSVSWNSMINVYIQNGSFDEAMKLFK-MMKTDVKPDSVTYVMLLSMSTQLGDLX 492

Query: 329 LTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYT 388
           L   +H    K G  SN  V   L  +Y++  EM  + K+F+    + + +WN +IA   
Sbjct: 493 LGKELHCDLAKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKARDIITWNTIIASCV 552

Query: 389 QNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIY 448
            +      + +   M+   V P+  T+ SIL  C+ L A   GK +H  +     ES++ 
Sbjct: 553 HSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVP 612

Query: 449 VSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSG 508
           V   LI+MY+KCG++  + ++F LM  K  VTW  +IS  G++G G +A++ F EM  +G
Sbjct: 613 VGNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAG 672

Query: 509 IRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKA 568
           I P  V F+++++ACSH+GLV EG   F  M  D+  +P  EHYAC+VD+L R+  L+KA
Sbjct: 673 IVPDHVAFVAIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSALLDKA 732

Query: 569 LEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAE 628
            +FI  + ++P  ++WGALL AC +  DT +A+  SE++ EL+P++ GY+VL+SN+Y+A 
Sbjct: 733 EDFILSMPLKPDSSIWGALLSACRMSGDTEIAQRVSERIIELNPDDTGYYVLVSNVYAAL 792

Query: 629 RDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKM 688
             + Q  ++R+ +K R L K PGC+ +E+    +VF +G +   Q   +  +L  L G M
Sbjct: 793 GKWDQVRSIRKSIKARGLKKDPGCSWMEIQNKVYVFGTGTKFSEQFEEVNKLLGMLAGLM 852

Query: 689 REAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCH 748
            + G+       LHD++E+EK  ++  HSE+LAIAFGL+ T+PGT ++++KNLRVC DCH
Sbjct: 853 AKEGYIANLQFVLHDIDEDEKRDILCGHSERLAIAFGLLNTKPGTPLQVMKNLRVCEDCH 912

Query: 749 TATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           T TK+ISK+  R ++VRDANRFH FK G CSCGDYW
Sbjct: 913 TVTKYISKIXQRELLVRDANRFHVFKDGACSCGDYW 948



 Score =  274 bits (701), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 176/581 (30%), Positives = 302/581 (51%), Gaps = 9/581 (1%)

Query: 16  LKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALF-FSIPKPDLFL 74
           L  A T +QL + H+ II  G  + +    KL  + + F+    + ++F  + P  +++ 
Sbjct: 82  LASAATTTQLHKLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFRLASPSNNVYX 141

Query: 75  FNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHA 134
           +N IIR  ++N +   ++  Y+  ++   L PD +T+  V++A +   D  +   +H   
Sbjct: 142 WNSIIRALTHNGLFSEALSLYSETQR-IRLQPDTYTFPSVINACAGLLDFEMAKSIHDRV 200

Query: 135 IVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSI 194
           +  G+GSDL++G AL+D+Y +F+ +  ARKVF++MP +D V WNS+ISG   N  + +++
Sbjct: 201 LXMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEAL 260

Query: 195 WVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSF 254
            ++    RN G   DS ++++VL A   +  +  G  I  L  K+G    V V  GL+S 
Sbjct: 261 EIYYRF-RNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNGLLSM 319

Query: 255 YSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTI 314
           Y K   +     +F  +V  D +S N MI GY+  G  E S++LF +++ +  + +  TI
Sbjct: 320 YCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEMV-NQFKPDLLTI 378

Query: 315 VGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSE 374
             ++      G L     +H + + SG   +++    L  +Y++   + A++++F     
Sbjct: 379 TSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKC 438

Query: 375 KSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWV 434
           K   SWN+MI  Y QNG  +EA+ LF+ M+ + V P+ VT   +LS   QLG + LGK +
Sbjct: 439 KDSVSWNSMINVYIQNGSFDEAMKLFKMMK-TDVKPDSVTYVMLLSMSTQLGDLXLGKEL 497

Query: 435 HELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHG 494
           H  +    F SNI VS  L+DMYAKCG + ++ ++F+ M  +  +TWNT+I+   +H   
Sbjct: 498 HCDLAKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKARDIITWNTIIAS-CVHSED 556

Query: 495 LE-ALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYA 553
               L++ S M   G+ P   T LS+L  CS     R+G EI    I   G +       
Sbjct: 557 CNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEI-HGCIFKLGLESDVPVGN 615

Query: 554 CMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIH 594
            ++++  + G L  + +  K L        W AL+ AC ++
Sbjct: 616 VLIEMYSKCGSLRNSFQVFK-LMKTKDVVTWTALISACGMY 655



 Score =  215 bits (548), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 133/472 (28%), Positives = 239/472 (50%), Gaps = 6/472 (1%)

Query: 130 LHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFD-KMPEKDTVLWNSMISGLMKNC 188
           LH   I  G    +   A L+  Y  F    S+  VF    P  +   WNS+I  L  N 
Sbjct: 94  LHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFRLASPSNNVYXWNSIIRALTHNG 153

Query: 189 CFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVL 248
            F +++ ++ +  R      D+ +  +V+ A A + +  +   I    L +GF   +Y+ 
Sbjct: 154 LFSEALSLYSETQRIR-LQPDTYTFPSVINACAGLLDFEMAKSIHDRVLXMGFGSDLYIG 212

Query: 249 TGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAER 308
             L+  Y +  ++++A  +F ++   D++S N++ISGY  NG    +L ++ +       
Sbjct: 213 NALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYRFRNLGVV 272

Query: 309 VNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKL 368
            +S T+  ++      G +   + IH    K GI  +  V   L ++Y + N +   R++
Sbjct: 273 PDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNGLLSMYCKFNGLIDGRRI 332

Query: 369 FDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAI 428
           FD+   +   SWN MI GY+Q GL EE+I LF EM  ++  P+ +T++SIL AC  LG +
Sbjct: 333 FDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEM-VNQFKPDLLTITSILQACGHLGDL 391

Query: 429 SLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGY 488
             GK+VH+ + +  +E +   S  LI+MYAKCGN++ ++E+F  M  K  V+WN+MI+ Y
Sbjct: 392 EFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVY 451

Query: 489 GLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPL 548
             +G   EA++LF +M+ + ++P  VT++ +L   +  G +  G E+   +    GF   
Sbjct: 452 IQNGSFDEAMKLF-KMMKTDVKPDSVTYVMLLSMSTQLGDLXLGKELHCDLAK-MGFNSN 509

Query: 549 AEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLA 600
                 +VD+  + G++  +L+  + +        W  ++ +C+  +D NL 
Sbjct: 510 IVVSNTLVDMYAKCGEMGDSLKVFENMKARD-IITWNTIIASCVHSEDCNLG 560



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 111/419 (26%), Positives = 206/419 (49%), Gaps = 18/419 (4%)

Query: 211 TSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRD 270
           +S++  L + A   +L    ++  L + LG H  V     L++ Y+   +   +  +FR 
Sbjct: 76  SSISRALASAATTTQLH---KLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFR- 131

Query: 271 IVRP--DLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLH 328
           +  P  ++   N++I   T NG    +L L+ +      + ++ T   +I          
Sbjct: 132 LASPSNNVYXWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFE 191

Query: 329 LTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYT 388
           +   IH   L  G  S+  +  AL  +Y R N+++ ARK+F+E   + + SWN++I+GY 
Sbjct: 192 MAKSIHDRVLXMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYN 251

Query: 389 QNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIY 448
            NG   EA+ ++   +   V P+  T+SS+L AC  LG++  G  +H L++    + ++ 
Sbjct: 252 ANGYWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVI 311

Query: 449 VSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSG 508
           V+  L+ MY K   +++ R +FD M  +  V+WNTMI GY   G   E+++LF EM++  
Sbjct: 312 VNNGLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEMVNQ- 370

Query: 509 IRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKA 568
            +P  +T  S+L AC H G +  G  +   MI   G++        ++++  + G L  +
Sbjct: 371 FKPDLLTITSILQACGHLGDLEFGKYVHDYMI-TSGYECDTTASNILINMYAKCGNLLAS 429

Query: 569 LEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFEL-----DPENVGYHVLLS 622
            E   G+  +   + W +++   +     N +   + KLF++      P++V Y +LLS
Sbjct: 430 QEVFSGMKCKDSVS-WNSMINVYI----QNGSFDEAMKLFKMMKTDVKPDSVTYVMLLS 483


>gi|359482718|ref|XP_002263673.2| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g09950-like [Vitis vinifera]
          Length = 1088

 Score =  502 bits (1292), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 273/797 (34%), Positives = 451/797 (56%), Gaps = 44/797 (5%)

Query: 27   QTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYAR----ALFFSIPKPDLFLFNVIIRGF 82
            Q H+++I  GF+ D    T + + L D  A C        +F  + + +   +N II   
Sbjct: 297  QVHSKLIACGFKGD----TFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAE 352

Query: 83   SNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSD 142
            +       ++  +  +++ +    + F    +L A++   D   G  LHGH + +   SD
Sbjct: 353  AQFGHFNDALVLFLRMQE-SGYKSNRFNLGSILMASAGLADIGKGRELHGHLVRNLLNSD 411

Query: 143  LFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVR 202
            + +G+ALVD+Y K   V+ A +VF  + E++ V +N++++G ++    ++++ ++ DM  
Sbjct: 412  IILGSALVDMYSKCGMVEEAHQVFRSLLERNEVSYNALLAGYVQEGKAEEALELYHDMQS 471

Query: 203  NGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVE 262
              G   D  +   +L   A  +    G +I    ++     ++ V T LV  YS+CG + 
Sbjct: 472  EDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRANITKNIIVETELVHMYSECGRLN 531

Query: 263  RAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFY 322
             A+ +F  +   +  S N+MI GY  NG+T+ +LRLF+Q+  +  + +  ++  ++    
Sbjct: 532  YAKEIFNRMAERNAYSWNSMIEGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCV 591

Query: 323  PFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEME------------------- 363
                      +H+F +++ +     +   L  +Y++   M+                   
Sbjct: 592  SLSDSQKGRELHNFIVRNTMEEEGILQVVLVDMYAKCGSMDYAWKVYDQTIKKDVILNNV 651

Query: 364  ------------AARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPN 411
                         A+ LFD+  +++ A WN+++AGY   GL +E+ + F EM  S +  +
Sbjct: 652  MVSAFVNSGRANDAKNLFDQMEQRNTALWNSILAGYANKGLKKESFNHFLEMLESDIEYD 711

Query: 412  PVTVSSILSACAQLGAISLGKWVHELVKSRNF-ESNIYVSTALIDMYAKCGNIVEARELF 470
             +T+ +I++ C+ L A+  G  +H L+  + F   ++ + TAL+DMY+KCG I +AR +F
Sbjct: 712  VLTMVTIVNLCSSLPALEHGDQLHSLIIKKGFVNCSVVLETALVDMYSKCGAITKARTVF 771

Query: 471  DLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVR 530
            D M+ K+ V+WN MISGY  HG   EAL L+ EM   G+ P+ VTFL++L ACSH GLV 
Sbjct: 772  DNMNGKNIVSWNAMISGYSKHGCSKEALILYEEMPKKGMYPNEVTFLAILSACSHTGLVE 831

Query: 531  EGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGA 590
            EG  IF SM  D+  +  AEHY CMVD+LGRAG+LE A EF++ + +EP  + WGALLGA
Sbjct: 832  EGLRIFTSMQEDYNIEAKAEHYTCMVDLLGRAGRLEDAKEFVEKMPIEPEVSTWGALLGA 891

Query: 591  CMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAP 650
            C +HKD ++ R+A+++LFELDP+N G +V++SNIY+A   + +   +RQ++K + + K P
Sbjct: 892  CRVHKDMDMGRLAAQRLFELDPQNPGPYVIMSNIYAAAGRWKEVEDIRQMMKMKGVKKDP 951

Query: 651  GCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTET---VTALHDVEEE 707
            G + IE+     +F +G + HP++  IY  L  L  + +  G+  +T   +  + D++EE
Sbjct: 952  GVSWIEINSEIQIFHAGSKTHPKTEEIYNNLRHLTLQSKGLGYIPDTSFILQNVKDIKEE 1011

Query: 708  EKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDA 767
            E+E  +  HSE+LA++ GLI+    + IR+ KNLR+C DCHTATKFISK+TGR I+ RD 
Sbjct: 1012 EEEEYLLQHSERLALSLGLISLPKKSTIRVFKNLRICGDCHTATKFISKITGRRIIARDT 1071

Query: 768  NRFHHFKGGVCSCGDYW 784
            NRFHHF+ G CSCGDYW
Sbjct: 1072 NRFHHFENGKCSCGDYW 1088



 Score =  233 bits (593), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 160/565 (28%), Positives = 273/565 (48%), Gaps = 58/565 (10%)

Query: 103 ALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSA 162
            + PDNFT++  L    A   R  G  +H   I  G+  D FVG AL+D+Y K    +S 
Sbjct: 271 GVCPDNFTFASALRVCGALRSRDGGKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEESC 330

Query: 163 RKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAE 222
            KVFD+M E++ V WNS+IS   +   F D++ +F  M +  G   +  ++ ++L A A 
Sbjct: 331 LKVFDEMGERNQVTWNSIISAEAQFGHFNDALVLFLRM-QESGYKSNRFNLGSILMASAG 389

Query: 223 VQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAM 282
           + ++  G E+    ++   +  + + + LV  YSKCG VE A  +FR ++  + +S NA+
Sbjct: 390 LADIGKGRELHGHLVRNLLNSDIILGSALVDMYSKCGMVEEAHQVFRSLLERNEVSYNAL 449

Query: 283 ISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNC---------- 332
           ++GY   GK E +L L+  + +           G+ P  + F  L LT C          
Sbjct: 450 LAGYVQEGKAEEALELYHDMQSED---------GIQPDQFTFTTL-LTLCANQRNDNQGR 499

Query: 333 -IHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNG 391
            IH+  +++ I  N  V T L  +YS    +  A+++F+  +E++  SWN+MI GY QNG
Sbjct: 500 QIHAHLIRANITKNIIVETELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQNG 559

Query: 392 LTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVST 451
            T+EA+ LF++MQ + + P+  ++SS+LS+C  L     G+ +H  +     E    +  
Sbjct: 560 ETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGILQV 619

Query: 452 ALIDMYAKCGNI-------------------------------VEARELFDLMSHKSEVT 480
            L+DMYAKCG++                                +A+ LFD M  ++   
Sbjct: 620 VLVDMYAKCGSMDYAWKVYDQTIKKDVILNNVMVSAFVNSGRANDAKNLFDQMEQRNTAL 679

Query: 481 WNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMI 540
           WN++++GY   G   E+   F EML S I    +T ++++  CS    +  GD++  S+I
Sbjct: 680 WNSILAGYANKGLKKESFNHFLEMLESDIEYDVLTMVTIVNLCSSLPALEHGDQL-HSLI 738

Query: 541 HDHGFKPLAEHY-ACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNL 599
              GF   +      +VD+  + G + KA      +  +     W A++     H  +  
Sbjct: 739 IKKGFVNCSVVLETALVDMYSKCGAITKARTVFDNMNGK-NIVSWNAMISGYSKHGCSKE 797

Query: 600 ARVASEKLFE--LDPENVGYHVLLS 622
           A +  E++ +  + P  V +  +LS
Sbjct: 798 ALILYEEMPKKGMYPNEVTFLAILS 822



 Score =  225 bits (574), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 146/548 (26%), Positives = 274/548 (50%), Gaps = 15/548 (2%)

Query: 29  HAQIIIHGFQNDLSTVTK---LAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNN 85
           H Q+I +G+  D   +TK   L  R       CYAR LF  +P+ +L  +N +I  ++  
Sbjct: 94  HTQMISNGYNPDAYLMTKILMLYARSGCLDDLCYARKLFEEMPERNLTAWNTMILAYARV 153

Query: 86  EMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFV 145
           +     +  Y  +R +   + D FT+  V+ A  A  D      L    + +G   +LFV
Sbjct: 154 DDYMEVLRLYGRMRGSGNFS-DKFTFPSVIKACIAMEDMGGVRQLQSSVVKAGLNCNLFV 212

Query: 146 GAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGG 205
           G ALVD Y +F W+  A    D++     V WN++I+G +K   ++++  +F  M++ G 
Sbjct: 213 GGALVDGYARFGWMDDAVTSLDEIEGTSVVTWNAVIAGYVKILSWEEAWGIFDRMLKIG- 271

Query: 206 TWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAE 265
              D+ + A+ L     ++    G ++    +  GF    +V   L+  Y+KC + E   
Sbjct: 272 VCPDNFTFASALRVCGALRSRDGGKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCL 331

Query: 266 LLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFG 325
            +F ++   + ++ N++IS     G    +L LF ++  S  + N   +  ++       
Sbjct: 332 KVFDEMGERNQVTWNSIISAEAQFGHFNDALVLFLRMQESGYKSNRFNLGSILMASAGLA 391

Query: 326 HLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIA 385
            +     +H   +++ + S+  + +AL  +YS+   +E A ++F    E++  S+NA++A
Sbjct: 392 DIGKGRELHGHLVRNLLNSDIILGSALVDMYSKCGMVEEAHQVFRSLLERNEVSYNALLA 451

Query: 386 GYTQNGLTEEAISLFQEMQASK-VAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFE 444
           GY Q G  EEA+ L+ +MQ+   + P+  T +++L+ CA     + G+ +H  +   N  
Sbjct: 452 GYVQEGKAEEALELYHDMQSEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRANIT 511

Query: 445 SNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEM 504
            NI V T L+ MY++CG +  A+E+F+ M+ ++  +WN+MI GY  +G   EAL+LF +M
Sbjct: 512 KNIIVETELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQNGETQEALRLFKQM 571

Query: 505 LHSGIRPSGVTFLSVLYACSHAGLVREGDE----IFQSMIHDHGFKPLAEHYACMVDILG 560
             +GI+P   +  S+L +C      ++G E    I ++ + + G   +      +VD+  
Sbjct: 572 QLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGILQVV-----LVDMYA 626

Query: 561 RAGQLEKA 568
           + G ++ A
Sbjct: 627 KCGSMDYA 634



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 108/387 (27%), Positives = 179/387 (46%), Gaps = 19/387 (4%)

Query: 217 LPAVAEVQE------LRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVER---AELL 267
           LP  + +Q+       + G  I    +  G++   Y++T ++  Y++ G ++    A  L
Sbjct: 72  LPYSSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDDLCYARKL 131

Query: 268 FRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHL 327
           F ++   +L + N MI  Y         LRL+ ++  S    +  T   +I        +
Sbjct: 132 FEEMPERNLTAWNTMILAYARVDDYMEVLRLYGRMRGSGNFSDKFTFPSVIKACIAMEDM 191

Query: 328 HLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGY 387
                + S  +K+G+  N  V  AL   Y+R   M+ A    DE    S+ +WNA+IAGY
Sbjct: 192 GGVRQLQSSVVKAGLNCNLFVGGALVDGYARFGWMDDAVTSLDEIEGTSVVTWNAVIAGY 251

Query: 388 TQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNI 447
            +    EEA  +F  M    V P+  T +S L  C  L +   GK VH  + +  F+ + 
Sbjct: 252 VKILSWEEAWGIFDRMLKIGVCPDNFTFASALRVCGALRSRDGGKQVHSKLIACGFKGDT 311

Query: 448 YVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHS 507
           +V  ALIDMYAKC +     ++FD M  +++VTWN++IS     GH  +AL LF  M  S
Sbjct: 312 FVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAEAQFGHFNDALVLFLRMQES 371

Query: 508 GIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHY----ACMVDILGRAG 563
           G + +     S+L A +    + +G E     +H H  + L        + +VD+  + G
Sbjct: 372 GYKSNRFNLGSILMASAGLADIGKGRE-----LHGHLVRNLLNSDIILGSALVDMYSKCG 426

Query: 564 QLEKALEFIKGLAVEPGPAVWGALLGA 590
            +E+A +  + L +E     + ALL  
Sbjct: 427 MVEEAHQVFRSL-LERNEVSYNALLAG 452



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 109/500 (21%), Positives = 215/500 (43%), Gaps = 74/500 (14%)

Query: 12  FLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPD 71
            L+L    +  +Q  Q HA +I      ++   T+L H  S+     YA+ +F  + + +
Sbjct: 485 LLTLCANQRNDNQGRQIHAHLIRANITKNIIVETELVHMYSECGRLNYAKEIFNRMAERN 544

Query: 72  LFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLH 131
            + +N +I G+  N   + ++  +  ++ N  + PD F+ S +LS+  +  D   G  LH
Sbjct: 545 AYSWNSMIEGYQQNGETQEALRLFKQMQLN-GIKPDCFSLSSMLSSCVSLSDSQKGRELH 603

Query: 132 GHAIVSGYGSDLFVGAALVDLYFK-----FSW--------------------------VK 160
              + +    +  +   LVD+Y K     ++W                            
Sbjct: 604 NFIVRNTMEEEGILQVVLVDMYAKCGSMDYAWKVYDQTIKKDVILNNVMVSAFVNSGRAN 663

Query: 161 SARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAV 220
            A+ +FD+M +++T LWNS+++G       ++S   F +M+ +   + D  ++  ++   
Sbjct: 664 DAKNLFDQMEQRNTALWNSILAGYANKGLKKESFNHFLEMLESDIEY-DVLTMVTIVNLC 722

Query: 221 AEVQELRLGMEIQCLGLKLGFHDHVYVL-TGLVSFYSKCGEVERAELLFRDIVRPDLISC 279
           + +  L  G ++  L +K GF +   VL T LV  YSKCG + +A  +F ++   +++S 
Sbjct: 723 SSLPALEHGDQLHSLIIKKGFVNCSVVLETALVDMYSKCGAITKARTVFDNMNGKNIVSW 782

Query: 280 NAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLK 339
           NAMISGY+ +G ++ +L L+ ++       N  T + +           L+ C H+  ++
Sbjct: 783 NAMISGYSKHGCSKEALILYEEMPKKGMYPNEVTFLAI-----------LSACSHTGLVE 831

Query: 340 SGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISL 399
            G+            +++ + E        D + E     +  M+    + G  E+A   
Sbjct: 832 EGL-----------RIFTSMQE--------DYNIEAKAEHYTCMVDLLGRAGRLEDAKEF 872

Query: 400 FQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFE---SNIYVSTALIDM 456
            ++M    + P   T  ++L AC     + +G+    L   R FE    N      + ++
Sbjct: 873 VEKM---PIEPEVSTWGALLGACRVHKDMDMGR----LAAQRLFELDPQNPGPYVIMSNI 925

Query: 457 YAKCGNIVEARELFDLMSHK 476
           YA  G   E  ++  +M  K
Sbjct: 926 YAAAGRWKEVEDIRQMMKMK 945


>gi|225442904|ref|XP_002264123.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15930 [Vitis vinifera]
          Length = 724

 Score =  502 bits (1292), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 261/688 (37%), Positives = 399/688 (57%), Gaps = 34/688 (4%)

Query: 130 LHGHAIVSGYGSDLFVGAALVDLYFKFSW--VKSARKVFDKMPEKDTVLWNSMISGLMKN 187
           +H   I +G  S+  V A ++    K     ++ AR VFD MP  +  +WN+MI G  + 
Sbjct: 38  IHSQTICTGLISNPIVPAQIIAFCCKHELGDMEYARMVFDTMPGPNHFVWNNMIKGYSRV 97

Query: 188 CCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYV 247
            C   ++ ++ +M+  G    D  +   +L        ++ G E+    +KLGF  +V+V
Sbjct: 98  GCPNSAVSMYCEMLERG-VMPDEYTYPFLLKRFTRDTAVKCGRELHDHIVKLGFSSNVFV 156

Query: 248 LTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAE 307
              L+  YS  GEV  A  +F    + D+++ N MISGY  + + + S++LF ++     
Sbjct: 157 QNALIHLYSLSGEVSVARGVFDRSSKGDVVTWNVMISGYNRSKQFDESMKLFDEMERMRV 216

Query: 308 RVNSSTIVGLIPVFYPFGHLHLTNCIHSFC--LKS------------------------G 341
             +S T+V ++        L++   +H +   LK                         G
Sbjct: 217 LPSSITLVSVLSACSKLKDLNVGKRVHRYVKDLKIEPVRVLENALIDMYAACGDMDTALG 276

Query: 342 IVSNSSV-----LTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEA 396
           I  N         TA+ T ++ L ++  AR  FD+  E+   SW AMI GY Q    +E 
Sbjct: 277 IFDNMKSRDVISWTAIVTGFTNLGQVGLARNYFDKMPERDFVSWTAMIDGYLQVNRFKEV 336

Query: 397 ISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDM 456
           +SLF+EMQA+ + P+  T+ SIL+ACA LGA+ LG+W+   +     + + +V  ALIDM
Sbjct: 337 LSLFREMQAANIKPDEFTMVSILTACAHLGALELGEWIKAYIDKNEIKIDSFVGNALIDM 396

Query: 457 YAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTF 516
           Y  CGN+ +A  +F+ M H+ +++W  +I G  ++G+G EAL +FS+ML + I P  VT 
Sbjct: 397 YFNCGNVEKAIRIFNAMPHRDKISWTAVIFGLAINGYGEEALDMFSQMLKASITPDEVTC 456

Query: 517 LSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLA 576
           + VL AC+H+G+V +G + F  M   HG +P   HY CMVD+LGRAG L++A E IK + 
Sbjct: 457 IGVLCACTHSGMVDKGKKFFARMTTQHGIEPNVAHYGCMVDLLGRAGHLKEAHEVIKNMP 516

Query: 577 VEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAAT 636
           V+P   VWG+LLGAC +H+D  +A +A++++ EL+PEN   +VLL NIY+A   + +   
Sbjct: 517 VKPNSIVWGSLLGACRVHRDEEMAEMAAQQILELEPENGAVYVLLCNIYAACNRWEKLHE 576

Query: 637 VRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTE 696
           VR+++  R + K PGC+LIE+ G+ H F +GDQ+HPQS  IY+ L++++  ++ AG+  +
Sbjct: 577 VRKLMMDRGIKKTPGCSLIEMNGSVHEFVAGDQVHPQSKEIYSKLDEMSVDLKFAGYSPD 636

Query: 697 TVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISK 756
           T     D+ EEEKE  +  HSEKLAIAFGLI++ PG  IRI+KNLR+C+DCH   K +SK
Sbjct: 637 TSEVFLDIGEEEKESAVYRHSEKLAIAFGLISSGPGVTIRIVKNLRMCVDCHYVAKLVSK 696

Query: 757 VTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           V  R ++VRD  RFHHF+ G CSC DYW
Sbjct: 697 VYNREVIVRDRTRFHHFRHGSCSCKDYW 724



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 143/517 (27%), Positives = 245/517 (47%), Gaps = 43/517 (8%)

Query: 13  LSLLKGAKTQSQLTQTHAQIIIHGF-QNDLSTVTKLA----HRLSDFKATCYARALFFSI 67
           LSL+K  K+ +QL Q H+Q I  G   N +     +A    H L D +   YAR +F ++
Sbjct: 23  LSLIKTCKSMAQLKQIHSQTICTGLISNPIVPAQIIAFCCKHELGDME---YARMVFDTM 79

Query: 68  PKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIG 127
           P P+ F++N +I+G+S    P S++  Y  + +   + PD +TY F+L   +       G
Sbjct: 80  PGPNHFVWNNMIKGYSRVGCPNSAVSMYCEMLER-GVMPDEYTYPFLLKRFTRDTAVKCG 138

Query: 128 VLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKN 187
             LH H +  G+ S++FV  AL+ LY     V  AR VFD+  + D V WN MISG  ++
Sbjct: 139 RELHDHIVKLGFSSNVFVQNALIHLYSLSGEVSVARGVFDRSSKGDVVTWNVMISGYNRS 198

Query: 188 CCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYV 247
             F +S+ +F +M R       S ++ +VL A +++++L +G  +      L       +
Sbjct: 199 KQFDESMKLFDEMERMR-VLPSSITLVSVLSACSKLKDLNVGKRVHRYVKDLKIEPVRVL 257

Query: 248 LTGLVSFYSKCGEVERAELLF-----RDIV--------------------------RPDL 276
              L+  Y+ CG+++ A  +F     RD++                            D 
Sbjct: 258 ENALIDMYAACGDMDTALGIFDNMKSRDVISWTAIVTGFTNLGQVGLARNYFDKMPERDF 317

Query: 277 ISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSF 336
           +S  AMI GY    + +  L LFR++ A+  + +  T+V ++      G L L   I ++
Sbjct: 318 VSWTAMIDGYLQVNRFKEVLSLFREMQAANIKPDEFTMVSILTACAHLGALELGEWIKAY 377

Query: 337 CLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEA 396
             K+ I  +S V  AL  +Y     +E A ++F+    +   SW A+I G   NG  EEA
Sbjct: 378 IDKNEIKIDSFVGNALIDMYFNCGNVEKAIRIFNAMPHRDKISWTAVIFGLAINGYGEEA 437

Query: 397 ISLFQEMQASKVAPNPVTVSSILSACAQLGAISLG-KWVHELVKSRNFESNIYVSTALID 455
           + +F +M  + + P+ VT   +L AC   G +  G K+   +      E N+     ++D
Sbjct: 438 LDMFSQMLKASITPDEVTCIGVLCACTHSGMVDKGKKFFARMTTQHGIEPNVAHYGCMVD 497

Query: 456 MYAKCGNIVEARELFDLMSHK-SEVTWNTMISGYGLH 491
           +  + G++ EA E+   M  K + + W +++    +H
Sbjct: 498 LLGRAGHLKEAHEVIKNMPVKPNSIVWGSLLGACRVH 534


>gi|449451271|ref|XP_004143385.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g11460-like [Cucumis sativus]
          Length = 623

 Score =  502 bits (1292), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 262/612 (42%), Positives = 377/612 (61%), Gaps = 9/612 (1%)

Query: 177 WNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLG 236
           WN+ +  L K C F  ++ ++  M+R+G    ++ +    L + A +    LG +     
Sbjct: 17  WNTQLRELAKRCQFLQALSLYPQMLRHGDR-PNAFTFPFALKSCAALSLPILGSQFHGQI 75

Query: 237 LKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIV--RPDLISCNAMISGYTCNGKTES 294
            K+G     +V TGL+S Y K   V+ A  +F +    R   +  NA++SGY  N K   
Sbjct: 76  TKVGCVFEPFVQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCSE 135

Query: 295 SLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALST 354
           ++ LFRQ+      VNS T++GLIP      +L L + +H   LK G  S+ SV+    T
Sbjct: 136 AVLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVVNCFIT 195

Query: 355 VYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVT 414
           +Y +   +  A+KLFDE   K L SWNAM++GY QNGL    + L++ M  + V P+PVT
Sbjct: 196 MYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGVHPDPVT 255

Query: 415 VSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMS 474
           +  +LS+CA LGA S+G  V   +++  F SN +++ ALI+MYA+CGN+ +A+ +FD M 
Sbjct: 256 LVGVLSSCANLGAQSVGHEVEFKIQASGFTSNPFLNNALINMYARCGNLTKAQAVFDGMP 315

Query: 475 HKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDE 534
            ++ V+W  +I GYG+HGHG  A+QLF EM+ SGI P G  F+ VL ACSHAGL  +G E
Sbjct: 316 ERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLTDQGLE 375

Query: 535 IFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIH 594
            F+ M  ++  +P  EHY+CMVD+LGRAG+L++A   I+ + ++P  AVWGALLGAC IH
Sbjct: 376 YFKMMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVWGALLGACKIH 435

Query: 595 KDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTL 654
           K+  LA +A E++ EL+PEN+GY+VLLSNIYS   +      +R ++K++KL K PGC+ 
Sbjct: 436 KNVELAELAFERVIELEPENIGYYVLLSNIYSNANNSKGVLRIRIMMKEKKLKKDPGCSY 495

Query: 655 IEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMK 714
           +E+ G  H F  GD+ H QS  IY +LE+L   + +   + E      + EE  K+   +
Sbjct: 496 VELKGRVHPFIVGDRNHLQSDEIYRVLEELEAIIMQEFGKPEK----DNREESNKDGFTR 551

Query: 715 --VHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHH 772
             VHSEKLA+AFGL+ T  G E+ IIKNLR+C DCH   K +SK+  R + VRDA RFHH
Sbjct: 552 VGVHSEKLAVAFGLLNTTTGAEVVIIKNLRICEDCHLFFKMVSKIVHRQLTVRDATRFHH 611

Query: 773 FKGGVCSCGDYW 784
           F+ G CSC DYW
Sbjct: 612 FRNGSCSCKDYW 623



 Score =  182 bits (463), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 118/391 (30%), Positives = 195/391 (49%), Gaps = 7/391 (1%)

Query: 106 PDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKV 165
           P+ FT+ F L + +A     +G   HG     G   + FV   L+ +Y K S V +ARKV
Sbjct: 47  PNAFTFPFALKSCAALSLPILGSQFHGQITKVGCVFEPFVQTGLISMYCKGSLVDNARKV 106

Query: 166 FDK--MPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEV 223
           F++     K TV +N+++SG + N    +++ +F  M    G  ++S ++  ++PA    
Sbjct: 107 FEENFHSRKLTVCYNALVSGYVSNSKCSEAVLLFRQM-NEEGVPVNSVTLLGLIPACVSP 165

Query: 224 QELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMI 283
             L LG  + C  LK GF   V V+   ++ Y KCG V  A+ LF ++    LIS NAM+
Sbjct: 166 INLELGSSLHCSTLKYGFDSDVSVVNCFITMYMKCGSVNYAQKLFDEMPVKGLISWNAMV 225

Query: 284 SGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIV 343
           SGY  NG   + L L+R +  +    +  T+VG++      G   + + +      SG  
Sbjct: 226 SGYAQNGLATNVLELYRNMDMNGVHPDPVTLVGVLSSCANLGAQSVGHEVEFKIQASGFT 285

Query: 344 SNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEM 403
           SN  +  AL  +Y+R   +  A+ +FD   E++L SW A+I GY  +G  E A+ LF+EM
Sbjct: 286 SNPFLNNALINMYARCGNLTKAQAVFDGMPERTLVSWTAIIGGYGMHGHGEIAVQLFKEM 345

Query: 404 QASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNF--ESNIYVSTALIDMYAKCG 461
             S + P+      +LSAC+  G    G    +++K RN+  E      + ++D+  + G
Sbjct: 346 IRSGIEPDGTAFVCVLSACSHAGLTDQGLEYFKMMK-RNYQLEPGPEHYSCMVDLLGRAG 404

Query: 462 NIVEARELFDLMSHKSE-VTWNTMISGYGLH 491
            + EA+ L + M  K +   W  ++    +H
Sbjct: 405 RLKEAQTLIESMPIKPDGAVWGALLGACKIH 435



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 86/388 (22%), Positives = 174/388 (44%), Gaps = 36/388 (9%)

Query: 75  FNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHA 134
           +N ++ G+ +N     ++  +  + +   +  ++ T   ++ A  +  +  +G  LH   
Sbjct: 120 YNALVSGYVSNSKCSEAVLLFRQMNEE-GVPVNSVTLLGLIPACVSPINLELGSSLHCST 178

Query: 135 IVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSI 194
           +  G+ SD+ V    + +Y K   V  A+K+FD+MP K  + WN+M+SG  +N    + +
Sbjct: 179 LKYGFDSDVSVVNCFITMYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVL 238

Query: 195 WVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSF 254
            ++ +M  N G   D  ++  VL + A +    +G E++      GF  + ++   L++ 
Sbjct: 239 ELYRNMDMN-GVHPDPVTLVGVLSSCANLGAQSVGHEVEFKIQASGFTSNPFLNNALINM 297

Query: 255 YSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTI 314
           Y++CG + +A+ +F  +    L+S  A+I GY  +G  E +++LF++++ S    + +  
Sbjct: 298 YARCGNLTKAQAVFDGMPERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAF 357

Query: 315 VGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSE 374
           V                C+ S C  +G       LT     Y ++  M+   +L     E
Sbjct: 358 V----------------CVLSACSHAG-------LTDQGLEYFKM--MKRNYQL-----E 387

Query: 375 KSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWV 434
                ++ M+    + G  +EA +L + M    + P+     ++L AC     + L +  
Sbjct: 388 PGPEHYSCMVDLLGRAGRLKEAQTLIESM---PIKPDGAVWGALLGACKIHKNVELAELA 444

Query: 435 HELVKSRNFESNIYVSTALIDMYAKCGN 462
            E V     E NI     L ++Y+   N
Sbjct: 445 FERVIELEPE-NIGYYVLLSNIYSNANN 471


>gi|297814916|ref|XP_002875341.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297321179|gb|EFH51600.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 659

 Score =  502 bits (1292), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 256/630 (40%), Positives = 380/630 (60%), Gaps = 11/630 (1%)

Query: 165 VFDKMPEK-DTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEV 223
           +F++  +K D   WNS+I+ L ++    +++  F  M R    +   +S    + A + +
Sbjct: 31  LFNRYVDKTDVFSWNSVIADLARSGDSAEALRAFSSM-RKLSLYPTRSSFPCAIKACSSL 89

Query: 224 QELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMI 283
            ++  G +        G+   ++V + L+  YS CG++E A  +F +I + +++S  +MI
Sbjct: 90  LDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMI 149

Query: 284 SGYTCNGKTESSLRLFRQLLASAER------VNSSTIVGLIPVFYPFGHLHLTNCIHSFC 337
            GY  NG    ++ LF+ LL           ++S  +V +I          LT  IHSF 
Sbjct: 150 RGYDLNGNALDAVSLFKDLLIEENDDDATMFLDSMGMVSVISACSRVAAKGLTESIHSFV 209

Query: 338 LKSGIVSNSSVLTALSTVYSRLNE--MEAARKLFDESSEKSLASWNAMIAGYTQNGLTEE 395
           +K G     SV   L   Y++  E  +  ARK+FD+  +K   S+N++++ Y Q+G++ E
Sbjct: 210 IKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNE 269

Query: 396 AISLFQEMQASKVAP-NPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALI 454
           A  +F+ +   KV   N +T+S++L A +  GA+ +GK +H+ V     E ++ V T++I
Sbjct: 270 AFDVFRRLIKEKVVTFNCITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSII 329

Query: 455 DMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGV 514
           DMY KCG +  AR  FD M +K+  +W  MI+GYG+HGH  +AL+LF  M+ SG+RP+ +
Sbjct: 330 DMYCKCGRVETARLAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYI 389

Query: 515 TFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKG 574
           TF+SVL ACSHAGL   G   F +M    G +P  EHY CMVD+LGRAG L+KA + I+ 
Sbjct: 390 TFVSVLAACSHAGLHDVGWHWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQK 449

Query: 575 LAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQA 634
           + +EP   +W +LL AC IHK+  LA ++  +LFELDP N GY++LLS+IY+    +   
Sbjct: 450 MKMEPDSIIWSSLLAACRIHKNVELAEISVARLFELDPSNCGYYMLLSHIYADSGRWKDV 509

Query: 635 ATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQ 694
             VR  +K R L K PG +L+E+ G  HVF  GD+ HPQ   IY  L +LN K+ EAG+ 
Sbjct: 510 ERVRMTMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAGYV 569

Query: 695 TETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFI 754
           + T +  HDV+EEEKE+ ++VHSEKLAIAFG++ T PG+ + ++KNLRVC DCH   K I
Sbjct: 570 SNTSSVCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLRVCSDCHNVIKLI 629

Query: 755 SKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           SK+  R  VVRDA RFHHFK G CSCGDYW
Sbjct: 630 SKIVDREFVVRDAKRFHHFKDGFCSCGDYW 659



 Score =  185 bits (469), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 126/437 (28%), Positives = 220/437 (50%), Gaps = 15/437 (3%)

Query: 67  IPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSI 126
           + K D+F +N +I   + +     ++  ++ +RK  +L P   ++   + A S+  D   
Sbjct: 36  VDKTDVFSWNSVIADLARSGDSAEALRAFSSMRK-LSLYPTRSSFPCAIKACSSLLDIFS 94

Query: 127 GVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMK 186
           G   H  A V GY SD+FV +AL+ +Y     ++ ARKVFD++P+++ V W SMI G   
Sbjct: 95  GKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDL 154

Query: 187 NCCFQDSIWVFGDMV-----RNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGF 241
           N    D++ +F D++      +   +LDS  + +V+ A + V    L   I    +K GF
Sbjct: 155 NGNALDAVSLFKDLLIEENDDDATMFLDSMGMVSVISACSRVAAKGLTESIHSFVIKRGF 214

Query: 242 HDHVYVLTGLVSFYSKCGE--VERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLF 299
              V V   L+  Y+K GE  V  A  +F  IV  D +S N+++S Y  +G +  +  +F
Sbjct: 215 DRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFDVF 274

Query: 300 RQLLASAERVNSSTIVGLIPVFYPFGH---LHLTNCIHSFCLKSGIVSNSSVLTALSTVY 356
           R+L+   E+V +   + L  V     H   L +  CIH   ++ G+  +  V T++  +Y
Sbjct: 275 RRLI--KEKVVTFNCITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMY 332

Query: 357 SRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVS 416
            +   +E AR  FD    K++ SW AMIAGY  +G   +A+ LF  M  S V PN +T  
Sbjct: 333 CKCGRVETARLAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFV 392

Query: 417 SILSACAQLGAISLG-KWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSH 475
           S+L+AC+  G   +G  W + +      E  +     ++D+  + G + +A +L   M  
Sbjct: 393 SVLAACSHAGLHDVGWHWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQKMKM 452

Query: 476 KSE-VTWNTMISGYGLH 491
           + + + W+++++   +H
Sbjct: 453 EPDSIIWSSLLAACRIH 469



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 117/445 (26%), Positives = 194/445 (43%), Gaps = 47/445 (10%)

Query: 27  QTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNE 86
           QTH Q  + G+Q+D+   + L    S       AR +F  IPK ++  +  +IRG+  N 
Sbjct: 97  QTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNG 156

Query: 87  MPKSSICFYTHL-----RKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGS 141
               ++  +  L       +  +  D+     V+SA S    + +   +H   I  G+  
Sbjct: 157 NALDAVSLFKDLLIEENDDDATMFLDSMGMVSVISACSRVAAKGLTESIHSFVIKRGFDR 216

Query: 142 DLFVGAALVDLYFKFS--WVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGD 199
            + VG  L+D Y K     V  ARK+FD++ +KD V +NS++S   ++    ++  VF  
Sbjct: 217 GVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFDVFRR 276

Query: 200 MVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCG 259
           +++      +  +++ VL AV+    LR+G  I    +++G  D V V T ++  Y KCG
Sbjct: 277 LIKEKVVTFNCITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCG 336

Query: 260 EVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIP 319
            VE A L F  +   ++ S  AMI+GY  +G    +L LF  ++ S  R N  T V +  
Sbjct: 337 RVETARLAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSV-- 394

Query: 320 VFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLAS 379
                    L  C H+     G              +   N M+    +     E  L  
Sbjct: 395 ---------LAACSHAGLHDVG--------------WHWFNAMKGRFGV-----EPGLEH 426

Query: 380 WNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVK 439
           +  M+    + G  ++A  L Q+M   K+ P+ +  SS+L+AC     + L     E+  
Sbjct: 427 YGCMVDLLGRAGFLQKAYDLIQKM---KMEPDSIIWSSLLAACRIHKNVELA----EISV 479

Query: 440 SRNFE---SNIYVSTALIDMYAKCG 461
           +R FE   SN      L  +YA  G
Sbjct: 480 ARLFELDPSNCGYYMLLSHIYADSG 504


>gi|297831082|ref|XP_002883423.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297329263|gb|EFH59682.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 679

 Score =  502 bits (1292), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 247/636 (38%), Positives = 380/636 (59%), Gaps = 1/636 (0%)

Query: 149 LVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWL 208
           ++ +Y     +  A  VF  +     + W S+I        F  ++  F +M R  G   
Sbjct: 45  VISIYTNLKLLHEALLVFKTLESPPVLAWKSVIRCFTDQSLFSRALASFVEM-RASGRCP 103

Query: 209 DSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLF 268
           D     +VL +   + +LR G  +    ++LG    +Y    L++ YSK   ++    +F
Sbjct: 104 DHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYSKLLGIDSVRKVF 163

Query: 269 RDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLH 328
             + R D++S N +I+GY  +G  E +LR+ R++  S  + ++ T+  ++P+F  +  + 
Sbjct: 164 ELMPRKDVVSYNTVIAGYAQSGMYEDALRMVREMGTSDLKPDAFTLSSVLPIFSEYVDVL 223

Query: 329 LTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYT 388
               IH + ++ GI S+  + ++L  +Y++   +E + ++F     +   SWN+++AGY 
Sbjct: 224 KGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSHLYRRDSISWNSLVAGYV 283

Query: 389 QNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIY 448
           QNG   EA+ LF++M ++KV P  V  SS++ ACA L  + LGK +H  V    F  NI+
Sbjct: 284 QNGRYNEALRLFRQMVSAKVRPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGRNIF 343

Query: 449 VSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSG 508
           +++AL+DMY+KCGNI  AR++FD M+   EV+W  +I G+ LHGHG EA+ LF EM   G
Sbjct: 344 IASALVDMYSKCGNIQAARKIFDRMNLHDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQG 403

Query: 509 IRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKA 568
           ++P+ V F++VL ACSH GLV E    F SM   +G     EHYA + D+LGRAG+LE+A
Sbjct: 404 VKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEA 463

Query: 569 LEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAE 628
            +FI  + VEP  +VW  LL +C +HK+  LA   +EK+F +D EN+G +VL+ N+Y++ 
Sbjct: 464 YDFISKMRVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTIDSENMGAYVLMCNMYASN 523

Query: 629 RDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKM 688
             + + A +R  V+K+ L K P C+ IE+    H F SGD+ HP    I   L+ +  +M
Sbjct: 524 GRWKEMAKLRLRVRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDRINEFLKAVMEQM 583

Query: 689 REAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCH 748
            + G+  +T   LHDV+EE K  ++  HSE+LA+AFG+I TEPGT IR+ KN+R+C DCH
Sbjct: 584 EKEGYVADTSGVLHDVDEEHKRELLFGHSERLAVAFGIINTEPGTTIRVTKNIRICTDCH 643

Query: 749 TATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
            A KFISK+T R I+VRD +RFHHF  G CSCGDYW
Sbjct: 644 VAIKFISKITEREIIVRDNSRFHHFNRGSCSCGDYW 679



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 142/500 (28%), Positives = 252/500 (50%), Gaps = 30/500 (6%)

Query: 8   SRNLFLSLLKGA---KTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCY----- 59
           S+ L  +L+K     K++SQ  Q HAQ I             L+H  +    + Y     
Sbjct: 4   SKALIKTLIKNPTRIKSKSQAKQLHAQFI---------RTQSLSHTSASIVISIYTNLKL 54

Query: 60  ---ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLS 116
              A  +F ++  P +  +  +IR F++  +   ++  +  +R  +   PD+  +  VL 
Sbjct: 55  LHEALLVFKTLESPPVLAWKSVIRCFTDQSLFSRALASFVEMRA-SGRCPDHNVFPSVLK 113

Query: 117 AASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVL 176
           + +   D   G  +HG  +  G   DL+ G AL+++Y K   + S RKVF+ MP KD V 
Sbjct: 114 SCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYSKLLGIDSVRKVFELMPRKDVVS 173

Query: 177 WNSMISGLMKNCCFQDSIWVFGDMVRNGGT---WLDSTSVAAVLPAVAEVQELRLGMEIQ 233
           +N++I+G  ++  ++D++     MVR  GT     D+ ++++VLP  +E  ++  G EI 
Sbjct: 174 YNTVIAGYAQSGMYEDAL----RMVREMGTSDLKPDAFTLSSVLPIFSEYVDVLKGKEIH 229

Query: 234 CLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTE 293
              ++ G    VY+ + LV  Y+K   +E +E +F  + R D IS N++++GY  NG+  
Sbjct: 230 GYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSHLYRRDSISWNSLVAGYVQNGRYN 289

Query: 294 SSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALS 353
            +LRLFRQ++++  R  +     +IP       LHL   +H + L+ G   N  + +AL 
Sbjct: 290 EALRLFRQMVSAKVRPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGRNIFIASALV 349

Query: 354 TVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPV 413
            +YS+   ++AARK+FD  +     SW A+I G+  +G   EA+SLF+EM+   V PN V
Sbjct: 350 DMYSKCGNIQAARKIFDRMNLHDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQV 409

Query: 414 TVSSILSACAQLGAISLG-KWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDL 472
              ++L+AC+ +G +     + + + K       +    A+ D+  + G + EA +    
Sbjct: 410 AFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYDFISK 469

Query: 473 MS-HKSEVTWNTMISGYGLH 491
           M    +   W+T++S   +H
Sbjct: 470 MRVEPTGSVWSTLLSSCSVH 489



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 118/464 (25%), Positives = 216/464 (46%), Gaps = 41/464 (8%)

Query: 10  NLFLSLLKGAKTQSQLT---QTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFS 66
           N+F S+LK       L      H  I+  G   DL T   L +  S        R +F  
Sbjct: 106 NVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYSKLLGIDSVRKVFEL 165

Query: 67  IPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSI 126
           +P+ D+  +N +I G++ + M + ++     +   + L PD FT S VL   S   D   
Sbjct: 166 MPRKDVVSYNTVIAGYAQSGMYEDALRMVREM-GTSDLKPDAFTLSSVLPIFSEYVDVLK 224

Query: 127 GVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMK 186
           G  +HG+ I  G  SD+++G++LVD+Y K + ++ + +VF  +  +D++ WNS+++G ++
Sbjct: 225 GKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSHLYRRDSISWNSLVAGYVQ 284

Query: 187 NCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVY 246
           N  + +++ +F  MV +      + + ++V+PA A +  L LG ++    L+ GF  +++
Sbjct: 285 NGRYNEALRLFRQMV-SAKVRPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGRNIF 343

Query: 247 VLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASA 306
           + + LV  YSKCG ++ A  +F  +   D +S  A+I G+  +G    ++ LF ++    
Sbjct: 344 IASALVDMYSKCGNIQAARKIFDRMNLHDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQG 403

Query: 307 ERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNS-SVLTALSTVYSRLNEMEAA 365
            + N    V +           LT C H      G+V  +     +++ VY    E+E  
Sbjct: 404 VKPNQVAFVAV-----------LTACSH-----VGLVDEAWGYFNSMTKVYGLNQELE-- 445

Query: 366 RKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQL 425
                         + A+     + G  EEA     +M   +V P     S++LS+C+  
Sbjct: 446 -------------HYAAVADLLGRAGKLEEAYDFISKM---RVEPTGSVWSTLLSSCSVH 489

Query: 426 GAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEAREL 469
             + L + V E + + + E N+     + +MYA  G   E  +L
Sbjct: 490 KNLELAEKVAEKIFTIDSE-NMGAYVLMCNMYASNGRWKEMAKL 532


>gi|297822703|ref|XP_002879234.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297325073|gb|EFH55493.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 740

 Score =  501 bits (1291), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 257/690 (37%), Positives = 398/690 (57%), Gaps = 36/690 (5%)

Query: 131 HGHAIVSGYGSDLFVGAAL--VDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNC 188
           H H I +G  SD +  + L  +     F+ ++ ARKVFD++P+ ++  WN++I       
Sbjct: 51  HAHMIRTGMFSDPYSASKLFAIAALSSFASLEYARKVFDEIPQPNSFTWNTLIRAYASGP 110

Query: 189 CFQDSIWVFGDMVRNGGT-WLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYV 247
               SIW F DMV +    + +  +   ++ A AEV  L LG  +  + +K      V+V
Sbjct: 111 DPVCSIWAFLDMVSSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAIKSAVGSDVFV 170

Query: 248 LTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAE 307
              L+  Y  CG+++ A  +F  I   D++S N+MI+G+   G  + +L LF+++ +   
Sbjct: 171 ANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDV 230

Query: 308 RVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARK 367
           + +  T+VG++        L     + S+  ++ +  N ++  A+  +Y++   +E A++
Sbjct: 231 KASHVTMVGVLSACAKIRDLEFGRRVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKR 290

Query: 368 LFDESSEKS-------------------------------LASWNAMIAGYTQNGLTEEA 396
           LFD   EK                                + +WNA+I+ Y QNG   EA
Sbjct: 291 LFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNAMPKKDIVAWNALISAYEQNGKPNEA 350

Query: 397 ISLFQEMQASK-VAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALID 455
           + +F E+Q  K +  N +T+ S LSACAQ+GA+ LG+W+H  +K    + N YV++ALI 
Sbjct: 351 LLVFHELQLQKNIKLNQITLVSTLSACAQVGALELGRWIHSYIKKNGIKMNFYVTSALIH 410

Query: 456 MYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVT 515
           MY+KCG++ +ARE+F+ +  +    W+ MI G  +HG G EA+ +F +M  + ++P+GVT
Sbjct: 411 MYSKCGDLEKAREVFNSVEKRDVFVWSAMIGGLAMHGCGSEAVDMFYKMQEANVKPNGVT 470

Query: 516 FLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGL 575
           F +V  ACSH GLV E + +F  M   +G  P  +HYAC+VD+LGR+G LEKA++FI+ +
Sbjct: 471 FTNVFCACSHTGLVDEAESLFYKMESSYGIVPEDKHYACIVDVLGRSGYLEKAVKFIEAM 530

Query: 576 AVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAA 635
            + P  +VWGALLGAC IH + +LA +A  +L EL+P N G HVLLSNIY+    +   +
Sbjct: 531 PIPPSTSVWGALLGACKIHANLSLAEMACTRLLELEPRNDGAHVLLSNIYAKSGKWDNVS 590

Query: 636 TVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQT 695
            +R+ ++   L K PGC+ IE+ G  H F SGD  HP S  +Y  L ++  K++  G++ 
Sbjct: 591 ELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVMEKLKSNGYEP 650

Query: 696 ETVTALHDVEEEE-KELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFI 754
           E    L  +EEEE KE  + +HSEKLAI +GLI+TE    IR+IKNLR+C DCH   K I
Sbjct: 651 EMSHVLQIIEEEEMKEQSLNLHSEKLAICYGLISTEAPKAIRVIKNLRMCGDCHAVAKLI 710

Query: 755 SKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           S++  R I+VRD  RFHHF+ G CSC D+W
Sbjct: 711 SQLYNREIIVRDRYRFHHFRNGQCSCNDFW 740



 Score =  219 bits (557), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 155/550 (28%), Positives = 268/550 (48%), Gaps = 39/550 (7%)

Query: 13  LSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKL--AHRLSDFKATCYARALFFSIPKP 70
           +SL+    +  QL QTHA +I  G  +D  + +KL     LS F +  YAR +F  IP+P
Sbjct: 35  ISLIDRCSSLRQLKQTHAHMIRTGMFSDPYSASKLFAIAALSSFASLEYARKVFDEIPQP 94

Query: 71  DLFLFNVIIRGFSNNEMPKSSI-CFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVL 129
           + F +N +IR +++   P  SI  F   +   +   P+ +T+ F++ AA+     S+G  
Sbjct: 95  NSFTWNTLIRAYASGPDPVCSIWAFLDMVSSESQCYPNKYTFPFLIKAAAEVSSLSLGQS 154

Query: 130 LHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCC 189
           LHG AI S  GSD+FV  +L+  YF    + SA KVF  + EKD V WNSMI+G ++   
Sbjct: 155 LHGMAIKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGS 214

Query: 190 FQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLT 249
              ++ +F  M  +        ++  VL A A++++L  G  +     +   + ++ +  
Sbjct: 215 PDKALELFKKM-ESEDVKASHVTMVGVLSACAKIRDLEFGRRVCSYIEENRVNVNLTLAN 273

Query: 250 GLVSFYSKCGEVERAELLF---------------------------RDIV----RPDLIS 278
            ++  Y+KCG +E A+ LF                           R+++    + D+++
Sbjct: 274 AMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNAMPKKDIVA 333

Query: 279 CNAMISGYTCNGKTESSLRLFRQL-LASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFC 337
            NA+IS Y  NGK   +L +F +L L    ++N  T+V  +      G L L   IHS+ 
Sbjct: 334 WNALISAYEQNGKPNEALLVFHELQLQKNIKLNQITLVSTLSACAQVGALELGRWIHSYI 393

Query: 338 LKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAI 397
            K+GI  N  V +AL  +YS+  ++E AR++F+   ++ +  W+AMI G   +G   EA+
Sbjct: 394 KKNGIKMNFYVTSALIHMYSKCGDLEKAREVFNSVEKRDVFVWSAMIGGLAMHGCGSEAV 453

Query: 398 SLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWV-HELVKSRNFESNIYVSTALIDM 456
            +F +MQ + V PN VT +++  AC+  G +   + + +++  S            ++D+
Sbjct: 454 DMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFYKMESSYGIVPEDKHYACIVDV 513

Query: 457 YAKCGNIVEARELFDLMS-HKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGV- 514
             + G + +A +  + M    S   W  ++    +H +   A    + +L    R  G  
Sbjct: 514 LGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLSLAEMACTRLLELEPRNDGAH 573

Query: 515 TFLSVLYACS 524
             LS +YA S
Sbjct: 574 VLLSNIYAKS 583


>gi|242076234|ref|XP_002448053.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
 gi|241939236|gb|EES12381.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
          Length = 693

 Score =  501 bits (1291), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 251/615 (40%), Positives = 372/615 (60%)

Query: 170 PEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLG 229
           P   T  +N ++  L+     +D++ +F +M+       D  +VA  L + + +  L +G
Sbjct: 79  PPLSTPCYNVLMRALLHAGHPEDALHLFVEMLDVASVCPDQHTVACALKSCSRMCTLDVG 138

Query: 230 MEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCN 289
             IQ   +K G     +VL+ L+  Y+ C +V  A+LLF  +    ++  NA+I+ Y  N
Sbjct: 139 RGIQAYAVKRGLMADRFVLSSLIHMYASCRDVAAAQLLFDAVEENGVVMWNAIITAYMKN 198

Query: 290 GKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVL 349
           G     + +F+ +L      +  T+V ++      G   L   +  +  + G+V N +++
Sbjct: 199 GNWMEVVEMFKGMLEVGVAFDEITLVSVVTACGRIGDAKLGKWVAEYVDEKGLVRNRNLM 258

Query: 350 TALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVA 409
           TAL  +Y++  E+  AR+LFD    + + +W+AMI+GYTQ     EA++LF EMQ ++V 
Sbjct: 259 TALIDMYAKCGELGKARRLFDGMQSRDVVAWSAMISGYTQADQCREALALFSEMQLAEVE 318

Query: 410 PNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEAREL 469
           PN VT+ S+LSACA LGA+  GKWVH  ++ +     I + TAL+D YAKCG I +A E 
Sbjct: 319 PNDVTMVSVLSACAVLGALETGKWVHSYIRRKRLSLTIILGTALVDFYAKCGCIDDAVEA 378

Query: 470 FDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLV 529
           F+ M  K+  TW  +I G   +G G EAL+LFS M  + I P+ VTF+ VL ACSH+ LV
Sbjct: 379 FESMPVKNSWTWTALIKGMATNGRGREALELFSSMRKASIEPTDVTFIGVLMACSHSCLV 438

Query: 530 REGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLG 589
            EG   F SM  D+G KP AEHY C+VD+LGRAG +++A +FI+ + +EP   +W ALL 
Sbjct: 439 EEGRRHFDSMTQDYGIKPRAEHYGCVVDLLGRAGLIDEAYQFIRTMPIEPNAVIWRALLS 498

Query: 590 ACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKA 649
           +C +HK+  +   A +++  L+P + G ++LLSNIY++   +  AA +R+ +K R + K 
Sbjct: 499 SCAVHKNVEIGEEALKQIVSLNPSHSGDYILLSNIYASVGQWKNAAMIRKEMKDRGIEKT 558

Query: 650 PGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEK 709
           PGC+LIE+ G    F + D  HPQ   IY  +E++  +++ AG+   T     +V+E EK
Sbjct: 559 PGCSLIELDGVVVEFFAEDSDHPQLKEIYQKVEEMIDRIKMAGYIPNTADVRLEVDEHEK 618

Query: 710 ELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANR 769
           E+ +  HSEKLAIAFGL+  +PG  IR+ KNLRVC DCH+ATK ISKV  R IVVRD NR
Sbjct: 619 EVSVSHHSEKLAIAFGLMKLDPGATIRLSKNLRVCTDCHSATKLISKVYNREIVVRDRNR 678

Query: 770 FHHFKGGVCSCGDYW 784
           FHHFK G CSC DYW
Sbjct: 679 FHHFKDGTCSCNDYW 693



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 131/512 (25%), Positives = 239/512 (46%), Gaps = 22/512 (4%)

Query: 25  LTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATC-----YARALFFSIPKPDLFL--FNV 77
           L Q HA +I  G   +L+   K  H L +  A       YA +LF   P+P L    +NV
Sbjct: 32  LPQLHAALIKSG---ELTGSPKCFHSLLEAAAASPTLLPYAVSLFRLGPRPPLSTPCYNV 88

Query: 78  IIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVS 137
           ++R   +   P+ ++  +  +    ++ PD  T +  L + S  C   +G  +  +A+  
Sbjct: 89  LMRALLHAGHPEDALHLFVEMLDVASVCPDQHTVACALKSCSRMCTLDVGRGIQAYAVKR 148

Query: 138 GYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVF 197
           G  +D FV ++L+ +Y     V +A+ +FD + E   V+WN++I+  MKN  + + + +F
Sbjct: 149 GLMADRFVLSSLIHMYASCRDVAAAQLLFDAVEENGVVMWNAIITAYMKNGNWMEVVEMF 208

Query: 198 GDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSK 257
             M+   G   D  ++ +V+ A   + + +LG  +     + G   +  ++T L+  Y+K
Sbjct: 209 KGMLEV-GVAFDEITLVSVVTACGRIGDAKLGKWVAEYVDEKGLVRNRNLMTALIDMYAK 267

Query: 258 CGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGL 317
           CGE+ +A  LF  +   D+++ +AMISGYT   +   +L LF ++  +    N  T+V +
Sbjct: 268 CGELGKARRLFDGMQSRDVVAWSAMISGYTQADQCREALALFSEMQLAEVEPNDVTMVSV 327

Query: 318 IPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSL 377
           +      G L     +HS+  +  +     + TAL   Y++   ++ A + F+    K+ 
Sbjct: 328 LSACAVLGALETGKWVHSYIRRKRLSLTIILGTALVDFYAKCGCIDDAVEAFESMPVKNS 387

Query: 378 ASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKW-VHE 436
            +W A+I G   NG   EA+ LF  M+ + + P  VT   +L AC+    +  G+     
Sbjct: 388 WTWTALIKGMATNGRGREALELFSSMRKASIEPTDVTFIGVLMACSHSCLVEEGRRHFDS 447

Query: 437 LVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMS-HKSEVTWNTMISGYGLHGH-- 493
           + +    +        ++D+  + G I EA +    M    + V W  ++S   +H +  
Sbjct: 448 MTQDYGIKPRAEHYGCVVDLLGRAGLIDEAYQFIRTMPIEPNAVIWRALLSSCAVHKNVE 507

Query: 494 -GLEALQLFSEM--LHSGIRPSGVTFLSVLYA 522
            G EAL+    +   HSG        LS +YA
Sbjct: 508 IGEEALKQIVSLNPSHSG----DYILLSNIYA 535


>gi|449433131|ref|XP_004134351.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g03580-like [Cucumis sativus]
          Length = 895

 Score =  501 bits (1291), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 273/756 (36%), Positives = 424/756 (56%), Gaps = 4/756 (0%)

Query: 29  HAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNEMP 88
           H   +  GF++DL     L    S F     AR +F  +   D   +N +I G+ +N   
Sbjct: 144 HEHAMEMGFESDLYIGNALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCSNGFW 203

Query: 89  KSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAA 148
           + ++  Y H  + T + PD FT S VL A  +      GV +HG     G   D+ +G  
Sbjct: 204 EDALDMY-HKFRMTGMVPDCFTMSSVLLACGSLMAVKEGVAVHGVIEKIGIAGDVIIGNG 262

Query: 149 LVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWL 208
           L+ +YFKF  ++ AR+VF KM  KD+V WN+MI G  +    + S+ +F DM+   G   
Sbjct: 263 LLSMYFKFERLREARRVFSKMAVKDSVTWNTMICGYAQLGRHEASVKLFMDMI--DGFVP 320

Query: 209 DSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLF 268
           D  S+ + + A  +  +L++G  +    +  GF         L+  Y+KCG++  A+ +F
Sbjct: 321 DMLSITSTIRACGQSGDLQVGKFVHKYLIGSGFECDTVACNILIDMYAKCGDLLAAQEVF 380

Query: 269 RDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLH 328
                 D ++ N++I+GYT +G  +  L  F+ ++    + +S T V L+ +F     ++
Sbjct: 381 DTTKCKDSVTWNSLINGYTQSGYYKEGLESFK-MMKMERKPDSVTFVLLLSIFSQLADIN 439

Query: 329 LTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYT 388
               IH   +K G  +   +  +L  VY++  EM+   K+F   S   + SWN +IA   
Sbjct: 440 QGRGIHCDVIKFGFEAELIIGNSLLDVYAKCGEMDDLLKVFSYMSAHDIISWNTVIASSV 499

Query: 389 QNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIY 448
                     +  EM+   + P+  TV  IL  C+ L     GK +H  +    FESN+ 
Sbjct: 500 HFDDCTVGFQMINEMRTEGLMPDEATVLGILPMCSLLAVRRQGKEIHGYIFKSGFESNVP 559

Query: 449 VSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSG 508
           +  ALI+MY+KCG++    ++F  M  K  VTW  +IS +G++G G +AL+ F +M  SG
Sbjct: 560 IGNALIEMYSKCGSLENCIKVFKYMKEKDVVTWTALISAFGMYGEGKKALKAFQDMELSG 619

Query: 509 IRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKA 568
           + P  V F++ ++ACSH+G+V+EG   F  M  D+  +P  EHYAC+VD+L R+G L +A
Sbjct: 620 VLPDSVAFIAFIFACSHSGMVKEGLRFFDRMKTDYNLEPRMEHYACVVDLLARSGLLAQA 679

Query: 569 LEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAE 628
            EFI  + ++P  ++WGALL AC    +TN+A+  S+K+ EL+ ++ GY+VL+SNIY+  
Sbjct: 680 EEFILSMPMKPDASLWGALLSACRARGNTNIAQRVSKKILELNSDDTGYYVLVSNIYATL 739

Query: 629 RDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKM 688
             + Q  TVR  +K + L K PG + IE+    +VF +GD+   Q   +  +LE L   M
Sbjct: 740 GKWDQVKTVRNSMKTKGLKKEPGSSWIEIQKRVYVFRTGDKSFEQYDKVKDLLEYLVRLM 799

Query: 689 REAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCH 748
            + G+  +   ALHDVEE++K  M+  HSE+LAIAFGL+ T+PG+ + ++KNLRVC DCH
Sbjct: 800 AKEGYVADLQFALHDVEEDDKRDMLCGHSERLAIAFGLLNTKPGSPLLVMKNLRVCGDCH 859

Query: 749 TATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           T TK+I+K+  R I+VRDANRFH FK G CSCGD+W
Sbjct: 860 TVTKYITKIMQREILVRDANRFHRFKDGACSCGDHW 895



 Score =  270 bits (689), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 174/592 (29%), Positives = 308/592 (52%), Gaps = 12/592 (2%)

Query: 5   TPQSRNLFL--SLLK---GAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCY 59
           TP+    FL  SLLK    AK   QL   H+ II  G    +    KL  + +  K    
Sbjct: 13  TPEPSQEFLRSSLLKTLSSAKNTPQLRTVHSLIITSGLSLSVIFSGKLISKYAQVKDPIS 72

Query: 60  ARALFFSI-PKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAA 118
           + ++F SI P  +++L+N IIR  ++N +   ++ +YT +R+   L PD FT+  V+++ 
Sbjct: 73  SVSVFRSISPTNNVYLWNSIIRALTHNGLFTQALGYYTEMREKK-LQPDAFTFPSVINSC 131

Query: 119 SACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWN 178
           +   D  +G ++H HA+  G+ SDL++G AL+D+Y +F  + +AR VF++M  +D+V WN
Sbjct: 132 ARILDLELGCIVHEHAMEMGFESDLYIGNALIDMYSRFVDLDNARYVFEEMSNRDSVSWN 191

Query: 179 SMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLK 238
           S+ISG   N  ++D++ ++    R  G   D  ++++VL A   +  ++ G+ +  +  K
Sbjct: 192 SLISGYCSNGFWEDALDMYHKF-RMTGMVPDCFTMSSVLLACGSLMAVKEGVAVHGVIEK 250

Query: 239 LGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRL 298
           +G    V +  GL+S Y K   +  A  +F  +   D ++ N MI GY   G+ E+S++L
Sbjct: 251 IGIAGDVIIGNGLLSMYFKFERLREARRVFSKMAVKDSVTWNTMICGYAQLGRHEASVKL 310

Query: 299 FRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSR 358
           F  ++      +  +I   I      G L +   +H + + SG   ++     L  +Y++
Sbjct: 311 FMDMI-DGFVPDMLSITSTIRACGQSGDLQVGKFVHKYLIGSGFECDTVACNILIDMYAK 369

Query: 359 LNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSI 418
             ++ AA+++FD +  K   +WN++I GYTQ+G  +E +  F+ M+  +  P+ VT   +
Sbjct: 370 CGDLLAAQEVFDTTKCKDSVTWNSLINGYTQSGYYKEGLESFKMMKMER-KPDSVTFVLL 428

Query: 419 LSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSE 478
           LS  +QL  I+ G+ +H  V    FE+ + +  +L+D+YAKCG + +  ++F  MS    
Sbjct: 429 LSIFSQLADINQGRGIHCDVIKFGFEAELIIGNSLLDVYAKCGEMDDLLKVFSYMSAHDI 488

Query: 479 VTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQS 538
           ++WNT+I+            Q+ +EM   G+ P   T L +L  CS   + R+G EI   
Sbjct: 489 ISWNTVIASSVHFDDCTVGFQMINEMRTEGLMPDEATVLGILPMCSLLAVRRQGKEI-HG 547

Query: 539 MIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGA 590
            I   GF+        ++++  + G LE  ++  K +  E     W AL+ A
Sbjct: 548 YIFKSGFESNVPIGNALIEMYSKCGSLENCIKVFKYMK-EKDVVTWTALISA 598



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 104/394 (26%), Positives = 191/394 (48%), Gaps = 16/394 (4%)

Query: 251 LVSFYSKCGEVERAELLFRDIVRPDLISC-NAMISGYTCNGKTESSLRLFRQLLASAERV 309
           L+S Y++  +   +  +FR I   + +   N++I   T NG    +L  + ++     + 
Sbjct: 60  LISKYAQVKDPISSVSVFRSISPTNNVYLWNSIIRALTHNGLFTQALGYYTEMREKKLQP 119

Query: 310 NSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLF 369
           ++ T   +I        L L   +H   ++ G  S+  +  AL  +YSR  +++ AR +F
Sbjct: 120 DAFTFPSVINSCARILDLELGCIVHEHAMEMGFESDLYIGNALIDMYSRFVDLDNARYVF 179

Query: 370 DESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAIS 429
           +E S +   SWN++I+GY  NG  E+A+ ++ + + + + P+  T+SS+L AC  L A+ 
Sbjct: 180 EEMSNRDSVSWNSLISGYCSNGFWEDALDMYHKFRMTGMVPDCFTMSSVLLACGSLMAVK 239

Query: 430 LGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYG 489
            G  VH +++      ++ +   L+ MY K   + EAR +F  M+ K  VTWNTMI GY 
Sbjct: 240 EGVAVHGVIEKIGIAGDVIIGNGLLSMYFKFERLREARRVFSKMAVKDSVTWNTMICGYA 299

Query: 490 LHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLA 549
             G    +++LF +M+  G  P  ++  S + AC  +G ++ G  + + +I   GF+   
Sbjct: 300 QLGRHEASVKLFMDMI-DGFVPDMLSITSTIRACGQSGDLQVGKFVHKYLI-GSGFE--C 355

Query: 550 EHYAC--MVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKL 607
           +  AC  ++D+  + G L  A E       +     W +L+     +  +   +   E  
Sbjct: 356 DTVACNILIDMYAKCGDLLAAQEVFDTTKCKDS-VTWNSLING---YTQSGYYKEGLESF 411

Query: 608 ----FELDPENVGYHVLLSNIYSAERDYLQAATV 637
                E  P++V + VLL +I+S   D  Q   +
Sbjct: 412 KMMKMERKPDSVTF-VLLLSIFSQLADINQGRGI 444


>gi|449482345|ref|XP_004156253.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g11460-like [Cucumis sativus]
          Length = 614

 Score =  501 bits (1290), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 262/612 (42%), Positives = 377/612 (61%), Gaps = 9/612 (1%)

Query: 177 WNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLG 236
           WN+ +  L K C F  ++ ++  M+R+G    ++ +    L + A +    LG +     
Sbjct: 8   WNTQLRELAKRCQFLQALSLYPQMLRHGDR-PNAFTFPFALKSCAALSLPILGSQFHGQI 66

Query: 237 LKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIV--RPDLISCNAMISGYTCNGKTES 294
            K+G     +V TGL+S Y K   V+ A  +F +    R   +  NA++SGY  N K   
Sbjct: 67  TKVGCVFEPFVQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCSD 126

Query: 295 SLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALST 354
           ++ LFRQ+      VNS T++GLIP      +L L + +H   LK G  S+ SV+    T
Sbjct: 127 AVLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVVNCFIT 186

Query: 355 VYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVT 414
           +Y +   +  A+KLFDE   K L SWNAM++GY QNGL    + L++ M  + V P+PVT
Sbjct: 187 MYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGVHPDPVT 246

Query: 415 VSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMS 474
           +  +LS+CA LGA S+G  V   +++  F SN +++ ALI+MYA+CGN+ +A+ +FD M 
Sbjct: 247 LVGVLSSCANLGAQSVGHEVEFKMQASGFTSNPFLNNALINMYARCGNLTKAQAVFDGMP 306

Query: 475 HKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDE 534
            ++ V+W  +I GYG+HGHG  A+QLF EM+ SGI P G  F+ VL ACSHAGL  +G E
Sbjct: 307 ERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLTDQGLE 366

Query: 535 IFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIH 594
            F+ M  ++  +P  EHY+CMVD+LGRAG+L++A   I+ + ++P  AVWGALLGAC IH
Sbjct: 367 YFKMMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVWGALLGACKIH 426

Query: 595 KDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTL 654
           K+  LA +A E++ EL+PEN+GY+VLLSNIYS   +      +R ++K++KL K PGC+ 
Sbjct: 427 KNVELAELAFERVIELEPENIGYYVLLSNIYSNANNSKGVLRIRIMMKEKKLKKDPGCSY 486

Query: 655 IEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMK 714
           +E+ G  H F  GD+ H QS  IY +LE+L   + +   + E      + EE  K+   +
Sbjct: 487 VELKGRVHPFIVGDRNHLQSDEIYRVLEELEAIIMQEFGKPEK----DNREESNKDGFTR 542

Query: 715 --VHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHH 772
             VHSEKLA+AFGL+ T  G E+ IIKNLR+C DCH   K +SK+  R + VRDA RFHH
Sbjct: 543 VGVHSEKLAVAFGLLNTTTGAEVVIIKNLRICEDCHLFFKMVSKIVHRQLTVRDATRFHH 602

Query: 773 FKGGVCSCGDYW 784
           F+ G CSC DYW
Sbjct: 603 FRNGSCSCKDYW 614



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 119/391 (30%), Positives = 195/391 (49%), Gaps = 7/391 (1%)

Query: 106 PDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKV 165
           P+ FT+ F L + +A     +G   HG     G   + FV   L+ +Y K S V +ARKV
Sbjct: 38  PNAFTFPFALKSCAALSLPILGSQFHGQITKVGCVFEPFVQTGLISMYCKGSLVDNARKV 97

Query: 166 FDK--MPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEV 223
           F++     K TV +N+++SG + N    D++ +F  M    G  ++S ++  ++PA    
Sbjct: 98  FEENFHSRKLTVCYNALVSGYVSNSKCSDAVLLFRQM-NEEGVPVNSVTLLGLIPACVSP 156

Query: 224 QELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMI 283
             L LG  + C  LK GF   V V+   ++ Y KCG V  A+ LF ++    LIS NAM+
Sbjct: 157 INLELGSSLHCSTLKYGFDSDVSVVNCFITMYMKCGSVNYAQKLFDEMPVKGLISWNAMV 216

Query: 284 SGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIV 343
           SGY  NG   + L L+R +  +    +  T+VG++      G   + + +      SG  
Sbjct: 217 SGYAQNGLATNVLELYRNMDMNGVHPDPVTLVGVLSSCANLGAQSVGHEVEFKMQASGFT 276

Query: 344 SNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEM 403
           SN  +  AL  +Y+R   +  A+ +FD   E++L SW A+I GY  +G  E A+ LF+EM
Sbjct: 277 SNPFLNNALINMYARCGNLTKAQAVFDGMPERTLVSWTAIIGGYGMHGHGEIAVQLFKEM 336

Query: 404 QASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNF--ESNIYVSTALIDMYAKCG 461
             S + P+      +LSAC+  G    G    +++K RN+  E      + ++D+  + G
Sbjct: 337 IRSGIEPDGTAFVCVLSACSHAGLTDQGLEYFKMMK-RNYQLEPGPEHYSCMVDLLGRAG 395

Query: 462 NIVEARELFDLMSHKSE-VTWNTMISGYGLH 491
            + EA+ L + M  K +   W  ++    +H
Sbjct: 396 RLKEAQTLIESMPIKPDGAVWGALLGACKIH 426



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 86/388 (22%), Positives = 174/388 (44%), Gaps = 36/388 (9%)

Query: 75  FNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHA 134
           +N ++ G+ +N     ++  +  + +   +  ++ T   ++ A  +  +  +G  LH   
Sbjct: 111 YNALVSGYVSNSKCSDAVLLFRQMNEE-GVPVNSVTLLGLIPACVSPINLELGSSLHCST 169

Query: 135 IVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSI 194
           +  G+ SD+ V    + +Y K   V  A+K+FD+MP K  + WN+M+SG  +N    + +
Sbjct: 170 LKYGFDSDVSVVNCFITMYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVL 229

Query: 195 WVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSF 254
            ++ +M  N G   D  ++  VL + A +    +G E++      GF  + ++   L++ 
Sbjct: 230 ELYRNMDMN-GVHPDPVTLVGVLSSCANLGAQSVGHEVEFKMQASGFTSNPFLNNALINM 288

Query: 255 YSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTI 314
           Y++CG + +A+ +F  +    L+S  A+I GY  +G  E +++LF++++ S    + +  
Sbjct: 289 YARCGNLTKAQAVFDGMPERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAF 348

Query: 315 VGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSE 374
           V                C+ S C  +G       LT     Y ++  M+   +L     E
Sbjct: 349 V----------------CVLSACSHAG-------LTDQGLEYFKM--MKRNYQL-----E 378

Query: 375 KSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWV 434
                ++ M+    + G  +EA +L + M    + P+     ++L AC     + L +  
Sbjct: 379 PGPEHYSCMVDLLGRAGRLKEAQTLIESM---PIKPDGAVWGALLGACKIHKNVELAELA 435

Query: 435 HELVKSRNFESNIYVSTALIDMYAKCGN 462
            E V     E NI     L ++Y+   N
Sbjct: 436 FERVIELEPE-NIGYYVLLSNIYSNANN 462


>gi|356542389|ref|XP_003539649.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g08820-like [Glycine max]
          Length = 676

 Score =  500 bits (1288), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 270/648 (41%), Positives = 377/648 (58%), Gaps = 2/648 (0%)

Query: 138 GYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVF 197
           G   D ++   L+     F+  + A  VF + P  +  L+N++I G++ N  F+D++ V+
Sbjct: 30  GLHQDTYLINLLLRSSLHFAATQYATVVFAQTPHPNIFLYNTLIRGMVSNDAFRDAVSVY 89

Query: 198 GDMVRNGGTWLDSTSVAAVLPAVAEVQE-LRLGMEIQCLGLKLGFHDHVYVLTGLVSFYS 256
             M R  G   D+ +   VL A   +     +G+ +  L +K GF   V+V TGLV  YS
Sbjct: 90  ASM-RQHGFAPDNFTFPFVLKACTRLPHYFHVGLSLHSLVIKTGFDWDVFVKTGLVCLYS 148

Query: 257 KCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVG 316
           K G +  A  +F +I   +++S  A+I GY  +G    +L LFR LL    R +S T+V 
Sbjct: 149 KNGFLTDARKVFDEIPEKNVVSWTAIICGYIESGCFGEALGLFRGLLEMGLRPDSFTLVR 208

Query: 317 LIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKS 376
           ++      G L     I  +  +SG V N  V T+L  +Y++   ME AR++FD   EK 
Sbjct: 209 ILYACSRVGDLASGRWIDGYMRESGSVGNVFVATSLVDMYAKCGSMEEARRVFDGMVEKD 268

Query: 377 LASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHE 436
           +  W+A+I GY  NG+ +EA+ +F EMQ   V P+   +  + SAC++LGA+ LG W   
Sbjct: 269 VVCWSALIQGYASNGMPKEALDVFFEMQRENVRPDCYAMVGVFSACSRLGALELGNWARG 328

Query: 437 LVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLE 496
           L+    F SN  + TALID YAKCG++ +A+E+F  M  K  V +N +ISG  + GH   
Sbjct: 329 LMDGDEFLSNPVLGTALIDFYAKCGSVAQAKEVFKGMRRKDCVVFNAVISGLAMCGHVGA 388

Query: 497 ALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMV 556
           A  +F +M+  G++P G TF+ +L  C+HAGLV +G   F  M       P  EHY CMV
Sbjct: 389 AFGVFGQMVKVGMQPDGNTFVGLLCGCTHAGLVDDGHRYFSGMSSVFSVTPTIEHYGCMV 448

Query: 557 DILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVG 616
           D+  RAG L +A + I+ + +E    VWGALLG C +HKDT LA    ++L EL+P N G
Sbjct: 449 DLQARAGLLVEAQDLIRSMPMEANSIVWGALLGGCRLHKDTQLAEHVLKQLIELEPWNSG 508

Query: 617 YHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTA 676
           ++VLLSNIYSA   + +A  +R  + ++ + K PGC+ +EV G  H F  GD  HP S  
Sbjct: 509 HYVLLSNIYSASHRWDEAEKIRSSLNQKGMQKLPGCSWVEVDGVVHEFLVGDTSHPLSHK 568

Query: 677 IYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIR 736
           IY  LE L   +REAG+   T   L DVEEEEKE  +  HSEKLA+AF LI+T     IR
Sbjct: 569 IYEKLESLFKDLREAGYNPTTEFVLFDVEEEEKEYFLGCHSEKLAVAFALISTGAKDVIR 628

Query: 737 IIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           ++KNLRVC DCH A K +SKVTGR I+VRD NRFHHF  G CSC DYW
Sbjct: 629 VVKNLRVCGDCHEAIKLVSKVTGREIIVRDNNRFHHFTEGSCSCRDYW 676



 Score =  221 bits (562), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 148/516 (28%), Positives = 250/516 (48%), Gaps = 14/516 (2%)

Query: 18  GAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNV 77
           G K+  Q  Q H  ++  G   D   +  L      F AT YA  +F   P P++FL+N 
Sbjct: 12  GLKSLHQAKQCHCLLLRLGLHQDTYLINLLLRSSLHFAATQYATVVFAQTPHPNIFLYNT 71

Query: 78  IIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDR-----SIGVLLHG 132
           +IRG  +N+  + ++  Y  +R++    PDNFT+ FVL A    C R      +G+ LH 
Sbjct: 72  LIRGMVSNDAFRDAVSVYASMRQH-GFAPDNFTFPFVLKA----CTRLPHYFHVGLSLHS 126

Query: 133 HAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQD 192
             I +G+  D+FV   LV LY K  ++  ARKVFD++PEK+ V W ++I G +++ CF +
Sbjct: 127 LVIKTGFDWDVFVKTGLVCLYSKNGFLTDARKVFDEIPEKNVVSWTAIICGYIESGCFGE 186

Query: 193 SIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLV 252
           ++ +F  ++   G   DS ++  +L A + V +L  G  I     + G   +V+V T LV
Sbjct: 187 ALGLFRGLLEM-GLRPDSFTLVRILYACSRVGDLASGRWIDGYMRESGSVGNVFVATSLV 245

Query: 253 SFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSS 312
             Y+KCG +E A  +F  +V  D++  +A+I GY  NG  + +L +F ++     R +  
Sbjct: 246 DMYAKCGSMEEARRVFDGMVEKDVVCWSALIQGYASNGMPKEALDVFFEMQRENVRPDCY 305

Query: 313 TIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDES 372
            +VG+       G L L N           +SN  + TAL   Y++   +  A+++F   
Sbjct: 306 AMVGVFSACSRLGALELGNWARGLMDGDEFLSNPVLGTALIDFYAKCGSVAQAKEVFKGM 365

Query: 373 SEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLG- 431
             K    +NA+I+G    G    A  +F +M    + P+  T   +L  C   G +  G 
Sbjct: 366 RRKDCVVFNAVISGLAMCGHVGAAFGVFGQMVKVGMQPDGNTFVGLLCGCTHAGLVDDGH 425

Query: 432 KWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSE-VTWNTMISGYGL 490
           ++   +    +    I     ++D+ A+ G +VEA++L   M  ++  + W  ++ G  L
Sbjct: 426 RYFSGMSSVFSVTPTIEHYGCMVDLQARAGLLVEAQDLIRSMPMEANSIVWGALLGGCRL 485

Query: 491 HGHGLEALQLFSEMLHSGIRPSG-VTFLSVLYACSH 525
           H     A  +  +++      SG    LS +Y+ SH
Sbjct: 486 HKDTQLAEHVLKQLIELEPWNSGHYVLLSNIYSASH 521


>gi|413919600|gb|AFW59532.1| hypothetical protein ZEAMMB73_249815 [Zea mays]
          Length = 886

 Score =  500 bits (1288), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 279/752 (37%), Positives = 420/752 (55%), Gaps = 71/752 (9%)

Query: 98  LRKNTALTPDNFTYSFVLSAA----SACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLY 153
           LR  T   PD+FT  + L A     S CC R+    LHG    +G+ S++FV  ALV +Y
Sbjct: 141 LRAGT--KPDHFTLPYALKACGELPSYCCGRA----LHGLICCNGFESNVFVCNALVAMY 194

Query: 154 FKFSWVKSARKVFDKMPEK---DTVLWNSMISGLMKNCCFQDSIWVFGDMV-----RNGG 205
            +   ++ A  VFD++  K   D + WNS+++  +K    + ++ +F +M      +   
Sbjct: 195 SRCGSLEDASLVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALELFSEMSMIVHEKATN 254

Query: 206 TWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAE 265
              D  S+  +LPA A ++ L    EI    ++ G     +V   L+  Y+KCG +  A 
Sbjct: 255 ERSDIISIVNILPACASLKALPQIKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMNDAV 314

Query: 266 LLFRDIVRPDLISCNAMISGYTCNGK---------------------------------- 291
            +F  +   D++S NAM++GYT +G                                   
Sbjct: 315 KVFNVMEFKDVVSWNAMVTGYTQSGNFGAAFELFENMRKENIPLDVITWSAVIAGYAQRG 374

Query: 292 -TESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSS--- 347
            ++ +L  F+Q++      NS TI+ L+      G L     IH++ LK  ++S  +   
Sbjct: 375 CSQEALDAFQQMILDGSEPNSVTIISLLSACASLGALSQGMEIHAYSLKKCLLSLDNDFG 434

Query: 348 ---------VLTALSTVYSRLNEMEAARKLFDE--SSEKSLASWNAMIAGYTQNGLTEEA 396
                    V  AL  +YS+    +AAR +FD     E+++ +W  MI GY Q G + +A
Sbjct: 435 GDGDGEDLMVYNALIDMYSKCRSFKAARSIFDSIPRRERNVVTWTVMIGGYAQYGDSNDA 494

Query: 397 ISLFQEM--QASKVAPNPVTVSSILSACAQLGAISLGKWVHELV-KSRNFESNIY-VSTA 452
           + +F EM  +   VAPN  T+S IL ACA L A+ +GK +H  V +   +E ++Y V+  
Sbjct: 495 LKIFSEMISKPYAVAPNAYTISCILMACAHLAALRMGKQIHAYVTRHHEYEPSVYFVANC 554

Query: 453 LIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPS 512
           LIDMY+KCG++  AR +FD M  ++EV+W +M+SGYG+HG G EAL +F +M  +G  P 
Sbjct: 555 LIDMYSKCGDVDTARNVFDSMPKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPD 614

Query: 513 GVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFI 572
            ++FL +LYACSH+G+V +G   F  M  D+     AEHYAC++D+L R G+L+KA + I
Sbjct: 615 DISFLVLLYACSHSGMVDQGLNYFDIMRRDYDVVASAEHYACVIDLLARCGRLDKAWKTI 674

Query: 573 KGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYL 632
           + + +EP   +W ALL AC +H +  LA  A  KL  +  EN G + L+SNIY+  R + 
Sbjct: 675 QEMPMEPSAVIWVALLSACRVHSNVELAEYALNKLVNMKAENDGSYTLISNIYANARRWK 734

Query: 633 QAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAG 692
             A +RQ++KK  + K PGC+ ++       F  GD+ HP S  IY++LE+L G+++  G
Sbjct: 735 DVARIRQLMKKSGIKKRPGCSWVQGKKGTASFFVGDRSHPLSPEIYSLLERLIGRIKVMG 794

Query: 693 FQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATK 752
           +  ET  ALHDV++EEK  ++  HSEKLA+A+GL+ T PG  IRI KNLRVC DCH+A  
Sbjct: 795 YVPETNFALHDVDDEEKNNLLSEHSEKLALAYGLLTTSPGCPIRITKNLRVCGDCHSAFT 854

Query: 753 FISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           +ISK+    I+VRD++RFHHFK G CSCG YW
Sbjct: 855 YISKIVDHEIIVRDSSRFHHFKNGSCSCGGYW 886



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 151/546 (27%), Positives = 248/546 (45%), Gaps = 65/546 (11%)

Query: 139 YGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFG 198
           Y S   +G  +V  Y      K A  V +++     V WN ++   +K      +I V  
Sbjct: 79  YVSPKSLGTGVVASYLACGATKDALSVLERVTPSPAVWWNLLVREHIKEGHLDRAIGVSC 138

Query: 199 DMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKC 258
            M+R  GT  D  ++   L A  E+     G  +  L    GF  +V+V   LV+ YS+C
Sbjct: 139 RMLR-AGTKPDHFTLPYALKACGELPSYCCGRALHGLICCNGFESNVFVCNALVAMYSRC 197

Query: 259 GEVERAELLFRDIVRP---DLISCNAMISGYTCNGKTESSLRLFRQL------LASAERV 309
           G +E A L+F +I R    D+IS N++++ +       ++L LF ++       A+ ER 
Sbjct: 198 GSLEDASLVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALELFSEMSMIVHEKATNERS 257

Query: 310 NSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLF 369
           +  +IV ++P       L     IHS+ +++G  +++ V  AL   Y++   M  A K+F
Sbjct: 258 DIISIVNILPACASLKALPQIKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMNDAVKVF 317

Query: 370 DESSEKSLASWNAM-----------------------------------IAGYTQNGLTE 394
           +    K + SWNAM                                   IAGY Q G ++
Sbjct: 318 NVMEFKDVVSWNAMVTGYTQSGNFGAAFELFENMRKENIPLDVITWSAVIAGYAQRGCSQ 377

Query: 395 EAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFES--------- 445
           EA+  FQ+M      PN VT+ S+LSACA LGA+S G  +H     +   S         
Sbjct: 378 EALDAFQQMILDGSEPNSVTIISLLSACASLGALSQGMEIHAYSLKKCLLSLDNDFGGDG 437

Query: 446 ---NIYVSTALIDMYAKCGNIVEARELFDLMSHKSE--VTWNTMISGYGLHGHGLEALQL 500
              ++ V  ALIDMY+KC +   AR +FD +  +    VTW  MI GY  +G   +AL++
Sbjct: 438 DGEDLMVYNALIDMYSKCRSFKAARSIFDSIPRRERNVVTWTVMIGGYAQYGDSNDALKI 497

Query: 501 FSEMLHS--GIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYA-CMVD 557
           FSEM+     + P+  T   +L AC+H   +R G +I   +   H ++P     A C++D
Sbjct: 498 FSEMISKPYAVAPNAYTISCILMACAHLAALRMGKQIHAYVTRHHEYEPSVYFVANCLID 557

Query: 558 ILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELD--PENV 615
           +  + G ++ A      +  +     W +++    +H     A    +K+ +    P+++
Sbjct: 558 MYSKCGDVDTARNVFDSMP-KRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDI 616

Query: 616 GYHVLL 621
            + VLL
Sbjct: 617 SFLVLL 622



 Score = 39.3 bits (90), Expect = 7.4,   Method: Compositional matrix adjust.
 Identities = 31/131 (23%), Positives = 54/131 (41%), Gaps = 1/131 (0%)

Query: 438 VKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEA 497
           + S ++ S   + T ++  Y  CG   +A  + + ++    V WN ++  +   GH   A
Sbjct: 74  LPSHSYVSPKSLGTGVVASYLACGATKDALSVLERVTPSPAVWWNLLVREHIKEGHLDRA 133

Query: 498 LQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVD 557
           + +   ML +G +P   T    L AC        G      +I  +GF+        +V 
Sbjct: 134 IGVSCRMLRAGTKPDHFTLPYALKACGELPSYCCG-RALHGLICCNGFESNVFVCNALVA 192

Query: 558 ILGRAGQLEKA 568
           +  R G LE A
Sbjct: 193 MYSRCGSLEDA 203


>gi|297820538|ref|XP_002878152.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297323990|gb|EFH54411.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 886

 Score =  500 bits (1288), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 287/801 (35%), Positives = 460/801 (57%), Gaps = 38/801 (4%)

Query: 12  FLSLLKGAKTQSQL---TQTHAQIIIHGFQND----LSTVTKLAHRLSDFKATCYARALF 64
           F +LLK       +    Q HA +   G+  D     +T+  L  +  DF A      +F
Sbjct: 96  FPALLKAVADLQDMDLGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAV---YKVF 152

Query: 65  FSIPKPDLFLFNVIIRGFSNNEMPKSSI-CFYTHLRKNTALTPDNFTYSFVLSAASACCD 123
             I + +   +N +I    + E  + ++  F   L ++  + P +FT   ++S A AC +
Sbjct: 153 DRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDED--VEPSSFT---LVSVALACSN 207

Query: 124 RSI------GVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLW 177
             +      G  +H + +  G  +  F+   LV +Y K   + S++ +      +D V W
Sbjct: 208 FPMPEGLLMGKQVHAYGLRKGELNS-FIINTLVAMYGKMGKLASSKVLLGSFEGRDLVTW 266

Query: 178 NSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGL 237
           N+++S L +N  F +++    +MV  G    D  ++++VLPA + ++ LR G E+    L
Sbjct: 267 NTVLSSLCQNEQFLEALEYLREMVLEG-VEPDGFTISSVLPACSHLEMLRTGKELHAYAL 325

Query: 238 KLG-FHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSL 296
           K G   ++ +V + LV  Y  C +V     +F  +    +   NAMI+GY  N   E +L
Sbjct: 326 KNGSLDENSFVGSALVDMYCNCKQVLSGCRVFDGMFDRKIGLWNAMITGYAQNEYDEEAL 385

Query: 297 RLFRQLLASAERV-NSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTV 355
            LF ++  SA  + NS+T+ G++P     G       IH F +K G+  +  V  AL  +
Sbjct: 386 LLFIEMEESAGLLANSTTMAGVVPACVRSGAFSKKEAIHGFVVKRGLDRDRFVQNALMDM 445

Query: 356 YSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQ---------AS 406
           YSRL +++ A+++F +  ++ L +WN +I GY  +   E+A+ +  +MQ         AS
Sbjct: 446 YSRLGKIDIAKRIFGKMEDRDLVTWNTIITGYVFSERHEDALLMLHKMQILERKASERAS 505

Query: 407 KVA--PNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIV 464
           +V+  PN +T+ +IL +CA L A++ GK +H      N  +++ V +AL+DMYAKCG + 
Sbjct: 506 RVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQ 565

Query: 465 EARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACS 524
            +R++FD +  ++ +TWN ++  YG+HG+  +A+ +   M+  G++P+ VTF+SV  ACS
Sbjct: 566 MSRKVFDQIPIRNVITWNVIVMAYGMHGNSQDAIDMLRMMMVQGVKPNEVTFISVFAACS 625

Query: 525 HAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPA-V 583
           H+G+V EG +IF +M  D+G +P ++HYAC+VD+LGRAG++++A + I  +      A  
Sbjct: 626 HSGMVNEGLKIFYNMKKDYGVEPSSDHYACVVDLLGRAGRVKEAYQLINLIPRNFDKAGA 685

Query: 584 WGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKK 643
           W +LLGAC IH +  +  +A++ L +L+P    ++VLL+NIYS+   + +A  VR+ +K 
Sbjct: 686 WSSLLGACRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWYKATEVRRNMKA 745

Query: 644 RKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHD 703
           + + K PGC+ IE G   H F +GD  HPQS  +   LE L  +MR+ G+  +T   LH+
Sbjct: 746 QGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLRGYLETLWERMRKEGYIPDTSCVLHN 805

Query: 704 VEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIV 763
           VEE+EKE+++  HSEKLAIAFG++ T PGT IR+ KNLRVC DCH ATKFISKV  R I+
Sbjct: 806 VEEDEKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCHLATKFISKVVDREII 865

Query: 764 VRDANRFHHFKGGVCSCGDYW 784
           +RD  RFHHFK G CSCGDYW
Sbjct: 866 LRDVRRFHHFKNGTCSCGDYW 886



 Score =  195 bits (496), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 140/517 (27%), Positives = 252/517 (48%), Gaps = 25/517 (4%)

Query: 103 ALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSD-LFVGAALVDLYFKFSWVKS 161
            + PDNF +  +L A +   D  +G  +H H    GYG D + V   LV+LY K     +
Sbjct: 88  GIKPDNFAFPALLKAVADLQDMDLGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGA 147

Query: 162 ARKVFDKMPEKDTVLWNSMISGLMKNCCFQD---SIWVFGDMVRNG--GTWLDSTSVAAV 216
             KVFD++ E++ V WNS+IS L   C F+    ++  F  M+      +     SVA  
Sbjct: 148 VYKVFDRISERNQVSWNSLISSL---CSFEKWEMALEAFRCMLDEDVEPSSFTLVSVALA 204

Query: 217 LPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDL 276
                  + L +G ++   GL+ G   + +++  LV+ Y K G++  +++L       DL
Sbjct: 205 CSNFPMPEGLLMGKQVHAYGLRKG-ELNSFIINTLVAMYGKMGKLASSKVLLGSFEGRDL 263

Query: 277 ISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSF 336
           ++ N ++S    N +   +L   R+++      +  TI  ++P       L     +H++
Sbjct: 264 VTWNTVLSSLCQNEQFLEALEYLREMVLEGVEPDGFTISSVLPACSHLEMLRTGKELHAY 323

Query: 337 CLKSG-IVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEE 395
            LK+G +  NS V +AL  +Y    ++ +  ++FD   ++ +  WNAMI GY QN   EE
Sbjct: 324 ALKNGSLDENSFVGSALVDMYCNCKQVLSGCRVFDGMFDRKIGLWNAMITGYAQNEYDEE 383

Query: 396 AISLFQEMQASK-VAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALI 454
           A+ LF EM+ S  +  N  T++ ++ AC + GA S  + +H  V  R  + + +V  AL+
Sbjct: 384 ALLLFIEMEESAGLLANSTTMAGVVPACVRSGAFSKKEAIHGFVVKRGLDRDRFVQNALM 443

Query: 455 DMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEML--------- 505
           DMY++ G I  A+ +F  M  +  VTWNT+I+GY       +AL +  +M          
Sbjct: 444 DMYSRLGKIDIAKRIFGKMEDRDLVTWNTIITGYVFSERHEDALLMLHKMQILERKASER 503

Query: 506 --HSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAG 563
                ++P+ +T +++L +C+    + +G EI    I ++    +A   A +VD+  + G
Sbjct: 504 ASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSA-LVDMYAKCG 562

Query: 564 QLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLA 600
            L+ + +    + +      W  ++ A  +H ++  A
Sbjct: 563 CLQMSRKVFDQIPIR-NVITWNVIVMAYGMHGNSQDA 598



 Score = 76.6 bits (187), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 55/205 (26%), Positives = 97/205 (47%), Gaps = 11/205 (5%)

Query: 322 YPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWN 381
           +P   L  +   H + L++   S +  +   STVY       A  K   +S   S   W 
Sbjct: 13  FPSQPLPFSRQKHPYLLRATPTSVTDDVA--STVYG------APSKFISQS--HSPEWWI 62

Query: 382 AMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSR 441
            ++    ++ L  EA+  + +M    + P+     ++L A A L  + LGK +H  V   
Sbjct: 63  DLLRSKVRSNLLREAVLTYIDMIVLGIKPDNFAFPALLKAVADLQDMDLGKQIHAHVYKF 122

Query: 442 NFE-SNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQL 500
            +   ++ V+  L+++Y KCG+     ++FD +S +++V+WN++IS          AL+ 
Sbjct: 123 GYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEA 182

Query: 501 FSEMLHSGIRPSGVTFLSVLYACSH 525
           F  ML   + PS  T +SV  ACS+
Sbjct: 183 FRCMLDEDVEPSSFTLVSVALACSN 207


>gi|296083884|emb|CBI24272.3| unnamed protein product [Vitis vinifera]
          Length = 729

 Score =  500 bits (1288), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 270/718 (37%), Positives = 407/718 (56%), Gaps = 45/718 (6%)

Query: 111 YSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMP 170
           Y+ +L       +  +G  +H   +V+G     F+G+ L+++Y +   V+ AR++FDKM 
Sbjct: 13  YASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMS 72

Query: 171 EKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGM 230
           E++   W +++        ++++I +F  MV N G   D      V  A +E++  R+G 
Sbjct: 73  ERNVFSWTAIMEMYCGLGDYEETIKLFYLMV-NEGVRPDHFVFPKVFKACSELKNYRVGK 131

Query: 231 EIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNG 290
           ++    L +GF  +  V   ++  + KCG ++ A   F +I   D+   N M+SGYT  G
Sbjct: 132 DVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKG 191

Query: 291 KTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLK-SGIVSNSSVL 349
           + + +L +FR+++    + NS TI   +        L     IH +C+K   + S+  V 
Sbjct: 192 EFKKALNVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVG 251

Query: 350 TALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIA--GYTQNGLTEEAISLFQ------ 401
            +L   Y++   +E AR+ F    +  L SWNAM+A  G+TQ G  + A+  FQ      
Sbjct: 252 NSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAVTGFTQYGDGKAALEFFQRMHIAC 311

Query: 402 -----------------------------------EMQASKVAPNPVTVSSILSACAQLG 426
                                              EM  S V  N VT+ S L AC++L 
Sbjct: 312 SVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLA 371

Query: 427 AISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMIS 486
           A+  GK +H+ +     ++  ++  +LIDMY +CG+I ++R +FDLM  +  V+WN MIS
Sbjct: 372 ALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMIS 431

Query: 487 GYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFK 546
            YG+HG G++A+ LF +    G++P+ +TF ++L ACSH+GL+ EG + F+ M  ++   
Sbjct: 432 VYGMHGFGMDAVNLFQQFRTMGLKPNHITFTNLLSACSHSGLIEEGWKYFKMMKTEYAMD 491

Query: 547 PLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEK 606
           P  E YACMVD+L RAGQ  + LEFI+ +  EP  AVWG+LLGAC IH + +LA  A+  
Sbjct: 492 PAVEQYACMVDLLSRAGQFNETLEFIEKMPFEPNAAVWGSLLGACRIHCNPDLAEYAARY 551

Query: 607 LFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTS 666
           LFEL+P++ G +VL++NIYSA   +  AA +R ++K+R + K PGC+ IEV    H F  
Sbjct: 552 LFELEPQSSGNYVLMANIYSAAGRWEDAAKIRCLMKERGVTKPPGCSWIEVKRKLHSFVV 611

Query: 667 GDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGL 726
           GD  HP    I A +E L   ++E G+  +T   L DV+E+EKE  +  HSEK+A+AFGL
Sbjct: 612 GDTSHPLMEQISAKMESLYFDIKEIGYVPDTNFVLQDVDEDEKEFSLCGHSEKIALAFGL 671

Query: 727 IATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           I+T  GT +RIIKNLRVC DCH+ATKFISKV  R I++RD  RFHHF  GVCSCGDYW
Sbjct: 672 ISTTAGTPLRIIKNLRVCGDCHSATKFISKVEKRDIIMRDNYRFHHFVDGVCSCGDYW 729


>gi|255559863|ref|XP_002520950.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223539787|gb|EEF41367.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 835

 Score =  499 bits (1285), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 281/781 (35%), Positives = 429/781 (54%), Gaps = 14/781 (1%)

Query: 12  FLSLLKGAKTQSQL---TQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSI- 67
           F  LLK       L    + H   I +G  + +  V  L    +       AR LF  + 
Sbjct: 61  FPVLLKACGIVEDLFCGAEIHGLAIKYGCDSFVFVVNSLVALYAKCNDINGARKLFDRMY 120

Query: 68  PKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRS-- 125
            + D+  +N II  +S N M   ++C ++ + K   +T    TY+F  +A  AC D S  
Sbjct: 121 VRNDVVSWNSIISAYSGNGMCTEALCLFSEMLKAGVVTN---TYTFA-AALQACEDSSFI 176

Query: 126 -IGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGL 184
            +G+ +H   + SG   D++V  ALV +Y +F  +  A  +F  +  KD V WNSM++G 
Sbjct: 177 KLGMQIHAAILKSGRVLDVYVANALVAMYVRFGKMPEAAVIFGNLEGKDIVTWNSMLTGF 236

Query: 185 MKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDH 244
           ++N  + +++  F D+ +N     D  S+ +++ A   +  L  G EI    +K GF  +
Sbjct: 237 IQNGLYSEALEFFYDL-QNADLKPDQVSIISIIVASGRLGYLLNGKEIHAYAIKNGFDSN 295

Query: 245 VYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLA 304
           + V   L+  Y+KC  +      F  +   DLIS     +GY  N     +L L RQL  
Sbjct: 296 ILVGNTLIDMYAKCCCMSYGGRAFDLMAHKDLISWTTAAAGYAQNKCYLQALELLRQLQM 355

Query: 305 SAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEA 364
               V+++ I  ++        L     IH + ++ G+ S+  +   +  VY     ++ 
Sbjct: 356 EGMDVDATMIGSILLACRGLNCLGKIKEIHGYTIRGGL-SDPVLQNTIIDVYGECGIIDY 414

Query: 365 ARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQ 424
           A ++F+    K + SW +MI+ Y  NGL  +A+ +F  M+ + + P+ VT+ SILSA   
Sbjct: 415 AVRIFESIECKDVVSWTSMISCYVHNGLANKALEVFSSMKETGLEPDYVTLVSILSAVCS 474

Query: 425 LGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTM 484
           L  +  GK +H  +  + F     +S  L+DMYA+CG++ +A ++F    +++ + W  M
Sbjct: 475 LSTLKKGKEIHGFIIRKGFILEGSISNTLVDMYARCGSVEDAYKIFTCTKNRNLILWTAM 534

Query: 485 ISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHG 544
           IS YG+HG+G  A++LF  M    I P  +TFL++LYACSH+GLV EG    + M  ++ 
Sbjct: 535 ISAYGMHGYGEAAVELFMRMKDEKIIPDHITFLALLYACSHSGLVNEGKSFLEIMKCEYQ 594

Query: 545 FKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVAS 604
            +P  EHY C+VD+LGR   LE+A + +K +  EP P VW ALLGAC IH +  +  VA+
Sbjct: 595 LEPWPEHYTCLVDLLGRRNCLEEAYQIVKSMQNEPTPEVWCALLGACRIHSNKEIGEVAA 654

Query: 605 EKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVF 664
           EKL ELD +N G +VL+SN+++A   +     VR  +K   L K PGC+ IEVG   H F
Sbjct: 655 EKLLELDLDNPGNYVLVSNVFAANGRWKDVEEVRMRMKGSGLTKNPGCSWIEVGNKIHAF 714

Query: 665 TSGDQLHPQSTAIYAMLEKLNGKM-REAGFQTETVTALHDVEEEEKELMMKVHSEKLAIA 723
            S D+LHP+   IY  L ++  K+ RE G+  +T   LH+V EEEK  M+  HSE+LAIA
Sbjct: 715 LSRDKLHPECDKIYQKLAQVTEKLKREGGYVAQTKFVLHNVGEEEKVQMLYGHSERLAIA 774

Query: 724 FGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDY 783
           +GL+AT  GT IR+ KNLRVC DCH+    +S+   R ++VRDA+RFHHFK G+CSCGD+
Sbjct: 775 YGLLATAEGTPIRVTKNLRVCGDCHSFCTLVSRFFERELIVRDASRFHHFKDGMCSCGDF 834

Query: 784 W 784
           W
Sbjct: 835 W 835



 Score =  226 bits (575), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 147/479 (30%), Positives = 242/479 (50%), Gaps = 9/479 (1%)

Query: 152 LYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDST 211
           +Y K   V  A  +FDKM E+    WN+M+ G + N     ++ ++ +M R+ G   DS 
Sbjct: 1   MYGKCGSVLDAEMIFDKMSERSIFTWNAMMGGYVSNGEALGALEMYREM-RHLGVSFDSY 59

Query: 212 SVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLF-RD 270
           +   +L A   V++L  G EI  L +K G    V+V+  LV+ Y+KC ++  A  LF R 
Sbjct: 60  TFPVLLKACGIVEDLFCGAEIHGLAIKYGCDSFVFVVNSLVALYAKCNDINGARKLFDRM 119

Query: 271 IVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLT 330
            VR D++S N++IS Y+ NG    +L LF ++L +    N+ T    +        + L 
Sbjct: 120 YVRNDVVSWNSIISAYSGNGMCTEALCLFSEMLKAGVVTNTYTFAAALQACEDSSFIKLG 179

Query: 331 NCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQN 390
             IH+  LKSG V +  V  AL  +Y R  +M  A  +F     K + +WN+M+ G+ QN
Sbjct: 180 MQIHAAILKSGRVLDVYVANALVAMYVRFGKMPEAAVIFGNLEGKDIVTWNSMLTGFIQN 239

Query: 391 GLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVS 450
           GL  EA+  F ++Q + + P+ V++ SI+ A  +LG +  GK +H       F+SNI V 
Sbjct: 240 GLYSEALEFFYDLQNADLKPDQVSIISIIVASGRLGYLLNGKEIHAYAIKNGFDSNILVG 299

Query: 451 TALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIR 510
             LIDMYAKC  +      FDLM+HK  ++W T  +GY  +   L+AL+L  ++   G+ 
Sbjct: 300 NTLIDMYAKCCCMSYGGRAFDLMAHKDLISWTTAAAGYAQNKCYLQALELLRQLQMEGMD 359

Query: 511 PSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALE 570
                  S+L AC     + +  EI    I      P+ ++   ++D+ G  G ++ A+ 
Sbjct: 360 VDATMIGSILLACRGLNCLGKIKEIHGYTIRGGLSDPVLQN--TIIDVYGECGIIDYAVR 417

Query: 571 FIKGLAVEPGPAVWGALLGACMIHK---DTNLARVASEKLFELDPENVGYHVLLSNIYS 626
             + +  +     W +++ +C +H    +  L   +S K   L+P+ V    +LS + S
Sbjct: 418 IFESIECKD-VVSWTSMI-SCYVHNGLANKALEVFSSMKETGLEPDYVTLVSILSAVCS 474



 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 163/568 (28%), Positives = 282/568 (49%), Gaps = 14/568 (2%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           A  +F  + +  +F +N ++ G+ +N     ++  Y  +R +  ++ D++T+  +L A  
Sbjct: 11  AEMIFDKMSERSIFTWNAMMGGYVSNGEALGALEMYREMR-HLGVSFDSYTFPVLLKACG 69

Query: 120 ACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKM-PEKDTVLWN 178
              D   G  +HG AI  G  S +FV  +LV LY K + +  ARK+FD+M    D V WN
Sbjct: 70  IVEDLFCGAEIHGLAIKYGCDSFVFVVNSLVALYAKCNDINGARKLFDRMYVRNDVVSWN 129

Query: 179 SMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLK 238
           S+IS    N    +++ +F +M++  G   ++ + AA L A  +   ++LGM+I    LK
Sbjct: 130 SIISAYSGNGMCTEALCLFSEMLK-AGVVTNTYTFAAALQACEDSSFIKLGMQIHAAILK 188

Query: 239 LGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRL 298
            G    VYV   LV+ Y + G++  A ++F ++   D+++ N+M++G+  NG    +L  
Sbjct: 189 SGRVLDVYVANALVAMYVRFGKMPEAAVIFGNLEGKDIVTWNSMLTGFIQNGLYSEALEF 248

Query: 299 FRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSR 358
           F  L  +  + +  +I+ +I      G+L     IH++ +K+G  SN  V   L  +Y++
Sbjct: 249 FYDLQNADLKPDQVSIISIIVASGRLGYLLNGKEIHAYAIKNGFDSNILVGNTLIDMYAK 308

Query: 359 LNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSI 418
              M    + FD  + K L SW    AGY QN    +A+ L +++Q   +  +   + SI
Sbjct: 309 CCCMSYGGRAFDLMAHKDLISWTTAAAGYAQNKCYLQALELLRQLQMEGMDVDATMIGSI 368

Query: 419 LSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSE 478
           L AC  L  +   K +H     R   S+  +   +ID+Y +CG I  A  +F+ +  K  
Sbjct: 369 LLACRGLNCLGKIKEIHGYT-IRGGLSDPVLQNTIIDVYGECGIIDYAVRIFESIECKDV 427

Query: 479 VTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQS 538
           V+W +MIS Y  +G   +AL++FS M  +G+ P  VT +S+L A      +++G EI   
Sbjct: 428 VSWTSMISCYVHNGLANKALEVFSSMKETGLEPDYVTLVSILSAVCSLSTLKKGKEIHGF 487

Query: 539 MIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTN 598
           +I   GF         +VD+  R G +E A + I          +W A++ A  +H    
Sbjct: 488 IIR-KGFILEGSISNTLVDMYARCGSVEDAYK-IFTCTKNRNLILWTAMISAYGMHGYGE 545

Query: 599 LA-----RVASEKLFELDPENVGYHVLL 621
            A     R+  EK+    P+++ +  LL
Sbjct: 546 AAVELFMRMKDEKII---PDHITFLALL 570


>gi|224106277|ref|XP_002314110.1| predicted protein [Populus trichocarpa]
 gi|222850518|gb|EEE88065.1| predicted protein [Populus trichocarpa]
          Length = 738

 Score =  498 bits (1283), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 271/703 (38%), Positives = 408/703 (58%), Gaps = 43/703 (6%)

Query: 121 CCDRSIGVLLHGHAIVSGY------GSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDT 174
           C ++     LH H + +G        + LF   AL       S +  A KVFD++P  + 
Sbjct: 40  CANKKHLKQLHAHMLRTGLFFDPPSATKLFTACALSSP----SSLDYACKVFDQIPRPNL 95

Query: 175 VLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQC 234
             WN++I     +      + VF  M+     + +S +   V+ A  EV  L  G  I  
Sbjct: 96  YTWNTLIRAFASSPKPIQGLLVFIQMLHESQRFPNSYTFPFVIKAATEVSSLLAGQAIHG 155

Query: 235 LGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTES 294
           + +K  F   +++   L+ FYS  G+++ A L+F  IV  D++S N+MISG+   G  E 
Sbjct: 156 MVMKASFGSDLFISNSLIHFYSSLGDLDSAYLVFSKIVEKDIVSWNSMISGFVQGGSPEE 215

Query: 295 SLRLFRQLLASAERVNSSTIVGLIP-----VFYPFG--------------HLHLTNCIHS 335
           +L+LF+++     R N  T+VG++      +   FG              +L L+N +  
Sbjct: 216 ALQLFKRMKMENARPNRVTMVGVLSACAKRIDLEFGRWACDYIERNGIDINLILSNAMLD 275

Query: 336 FCLKSGIVSNSSVL------------TALSTVYSRLNEMEAARKLFDESSEKSLASWNAM 383
             +K G + ++  L            T +   Y+++ + +AAR++FD    + + +WNA+
Sbjct: 276 MYVKCGSLEDARRLFDKMEEKDIVSWTTMIDGYAKVGDYDAARRVFDVMPREDITAWNAL 335

Query: 384 IAGYTQNGLTEEAISLFQEMQASK-VAPNPVTVSSILSACAQLGAISLGKWVHELVKSRN 442
           I+ Y QNG  +EA+++F+E+Q +K   PN VT++S L+ACAQLGA+ LG W+H  +K + 
Sbjct: 336 ISSYQQNGKPKEALAIFRELQLNKNTKPNEVTLASTLAACAQLGAMDLGGWIHVYIKKQG 395

Query: 443 FESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFS 502
            + N +++T+LIDMY+KCG++ +A E+F  +  +    W+ MI+G  +HGHG  A+ LFS
Sbjct: 396 IKLNFHITTSLIDMYSKCGHLEKALEVFYSVERRDVFVWSAMIAGLAMHGHGRAAIDLFS 455

Query: 503 EMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRA 562
           +M  + ++P+ VTF ++L ACSH+GLV EG   F  M   +G  P ++HYACMVDILGRA
Sbjct: 456 KMQETKVKPNAVTFTNLLCACSHSGLVDEGRLFFNQMRPVYGVVPGSKHYACMVDILGRA 515

Query: 563 GQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLS 622
           G LE+A+E I+ + + P  +VWGALLGAC I+ +  LA +A  +L E D  N G +VLLS
Sbjct: 516 GCLEEAVELIEKMPIVPSASVWGALLGACRIYGNVELAEMACSRLLETDSNNHGAYVLLS 575

Query: 623 NIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLE 682
           NIY+    +   + +RQ +K   L K PGC+ IEV G  H F  GD  HP ST IY+ L+
Sbjct: 576 NIYAKAGKWDCVSRLRQHMKVSGLEKEPGCSSIEVNGIIHEFLVGDNSHPLSTEIYSKLD 635

Query: 683 KLNGKMREAGFQTETVTALHDVEEEE-KELMMKVHSEKLAIAFGLIATEPGTEIRIIKNL 741
           ++  +++  G+ ++    L  VEEE  KE  + +HSEKLAIA+GLI  EP   IRI+KNL
Sbjct: 636 EIVARIKSTGYVSDESHLLQFVEEEYMKEHALNLHSEKLAIAYGLIRMEPSQPIRIVKNL 695

Query: 742 RVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           RVC DCH+  K ISK+  R I++RD  RFHHF GG CSC DYW
Sbjct: 696 RVCGDCHSVAKLISKLYNRDILLRDRYRFHHFSGGNCSCMDYW 738



 Score =  206 bits (523), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 151/545 (27%), Positives = 254/545 (46%), Gaps = 38/545 (6%)

Query: 15  LLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKL--AHRLSDFKATCYARALFFSIPKPDL 72
           L+     +  L Q HA ++  G   D  + TKL  A  LS   +  YA  +F  IP+P+L
Sbjct: 36  LIDKCANKKHLKQLHAHMLRTGLFFDPPSATKLFTACALSSPSSLDYACKVFDQIPRPNL 95

Query: 73  FLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHG 132
           + +N +IR F+++  P   +  +  +   +   P+++T+ FV+ AA+       G  +HG
Sbjct: 96  YTWNTLIRAFASSPKPIQGLLVFIQMLHESQRFPNSYTFPFVIKAATEVSSLLAGQAIHG 155

Query: 133 HAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQD 192
             + + +GSDLF+  +L+  Y     + SA  VF K+ EKD V WNSMISG ++    ++
Sbjct: 156 MVMKASFGSDLFISNSLIHFYSSLGDLDSAYLVFSKIVEKDIVSWNSMISGFVQGGSPEE 215

Query: 193 SIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLV 252
           ++ +F  M        +  ++  VL A A+  +L  G        + G   ++ +   ++
Sbjct: 216 ALQLFKRMKMENAR-PNRVTMVGVLSACAKRIDLEFGRWACDYIERNGIDINLILSNAML 274

Query: 253 SFYSKCGEVERAELLF-----RDIV--------------------------RPDLISCNA 281
             Y KCG +E A  LF     +DIV                          R D+ + NA
Sbjct: 275 DMYVKCGSLEDARRLFDKMEEKDIVSWTTMIDGYAKVGDYDAARRVFDVMPREDITAWNA 334

Query: 282 MISGYTCNGKTESSLRLFRQL-LASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKS 340
           +IS Y  NGK + +L +FR+L L    + N  T+   +      G + L   IH +  K 
Sbjct: 335 LISSYQQNGKPKEALAIFRELQLNKNTKPNEVTLASTLAACAQLGAMDLGGWIHVYIKKQ 394

Query: 341 GIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLF 400
           GI  N  + T+L  +YS+   +E A ++F     + +  W+AMIAG   +G    AI LF
Sbjct: 395 GIKLNFHITTSLIDMYSKCGHLEKALEVFYSVERRDVFVWSAMIAGLAMHGHGRAAIDLF 454

Query: 401 QEMQASKVAPNPVTVSSILSACAQLGAISLGK-WVHELVKSRNFESNIYVSTALIDMYAK 459
            +MQ +KV PN VT +++L AC+  G +  G+ + +++               ++D+  +
Sbjct: 455 SKMQETKVKPNAVTFTNLLCACSHSGLVDEGRLFFNQMRPVYGVVPGSKHYACMVDILGR 514

Query: 460 CGNIVEARELFDLMS-HKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGV-TFL 517
            G + EA EL + M    S   W  ++    ++G+   A    S +L +     G    L
Sbjct: 515 AGCLEEAVELIEKMPIVPSASVWGALLGACRIYGNVELAEMACSRLLETDSNNHGAYVLL 574

Query: 518 SVLYA 522
           S +YA
Sbjct: 575 SNIYA 579


>gi|147856457|emb|CAN80769.1| hypothetical protein VITISV_013866 [Vitis vinifera]
          Length = 761

 Score =  498 bits (1283), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 296/799 (37%), Positives = 435/799 (54%), Gaps = 89/799 (11%)

Query: 23  SQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATC-YARALFFSIPKPDLFLFNVIIRG 81
           S L Q HAQII +   +    V  L +  +  +A   Y   LF S   P++F+F  ++R 
Sbjct: 15  SHLRQLHAQIIHNSLHHHNYWVALLINHCTRLRAPPHYTHLLFNSTLNPNVFVFTSMLRF 74

Query: 82  FSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGS 141
           +S+ +     +  + H+ +   + PD F Y  ++ +A      + G+  H H +  G+GS
Sbjct: 75  YSHLQDHAKVVLMFEHM-QGCGVRPDAFVYPILIKSAG-----NGGIGFHAHVLKLGHGS 128

Query: 142 DLFVGAALVDLYFKFSWVKSARKVFDKMP--EKDTVLWNSMISGLMKNCCFQDSIWVFGD 199
           D FV  A++D+Y +   +  ARKVFD++P  E+    WN+M+SG  K      + W+F  
Sbjct: 129 DAFVRNAVIDMYARLGPIGHARKVFDEIPDYERKVADWNAMVSGYWKWESEGQAQWLFDV 188

Query: 200 MV-RNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKC 258
           M  RN  TW                                         T +V+ Y+K 
Sbjct: 189 MPERNVITW-----------------------------------------TAMVTGYAKV 207

Query: 259 GEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLI 318
            ++E A   F  +    ++S NAM+SGY  NG  E  LRLF +++ +    + +T V +I
Sbjct: 208 KDLEAARRYFDCMPERSVVSWNAMLSGYAQNGLAEEVLRLFDEMVNAGIEPDETTWVTVI 267

Query: 319 PVFYPFGH----------LHLT----NCIHSFCL------------------KSGIVSNS 346
                 G           LH      NC     L                  + G   NS
Sbjct: 268 SACSSRGDPCLAASLVRTLHQKQIQLNCFVRTALLDMYAKCGSIGAARRIFDELGAYRNS 327

Query: 347 SVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEM-QA 405
               A+ + Y+R+  +++AR+LF+    +++ +WN+MIAGY QNG +  AI LF+EM  A
Sbjct: 328 VTWNAMISAYTRVGNLDSARELFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITA 387

Query: 406 SKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVE 465
            K+ P+ VT+ S++SAC  LGA+ LG WV   +     + +I    A+I MY++CG++ +
Sbjct: 388 KKLTPDEVTMVSVISACGHLGALELGNWVVRFLTENQIKLSISGHNAMIFMYSRCGSMED 447

Query: 466 ARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSH 525
           A+ +F  M+ +  V++NT+ISG+  HGHG+EA+ L S M   GI P  VTF+ VL ACSH
Sbjct: 448 AKRVFQEMATRDVVSYNTLISGFAAHGHGVEAINLMSTMKEGGIEPDRVTFIGVLTACSH 507

Query: 526 AGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWG 585
           AGL+ EG ++F+S I D    P  +HYACMVD+LGR G+LE A   ++ + +EP   V+G
Sbjct: 508 AGLLEEGRKVFES-IKD----PAIDHYACMVDLLGRVGELEDAKRTMERMPMEPHAGVYG 562

Query: 586 ALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRK 645
           +LL A  IHK   L  +A+ KLFEL+P+N G  +LLSNIY++   +     +R+ +KK  
Sbjct: 563 SLLNASRIHKQVELGELAANKLFELEPDNSGNFILLSNIYASAGRWKDVERIREAMKKGG 622

Query: 646 LAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVE 705
           + K  G + +E GG  H F   D+ H +S  IY +L +L  KMREAG+  +    L DVE
Sbjct: 623 VKKTTGWSWVEYGGKLHKFIVADRSHERSDDIYQLLIELRKKMREAGYIADKSCVLRDVE 682

Query: 706 EEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVR 765
           EEEKE ++  HSEKLAI + L+ +E G  IR++KNLRVC DCHTA K ISK+ GRVI+VR
Sbjct: 683 EEEKEEIVGTHSEKLAICYALLVSEAGAVIRVVKNLRVCWDCHTAIKMISKLEGRVIIVR 742

Query: 766 DANRFHHFKGGVCSCGDYW 784
           D NRFH F  G+CSC DYW
Sbjct: 743 DNNRFHCFNDGLCSCKDYW 761


>gi|224107052|ref|XP_002333576.1| predicted protein [Populus trichocarpa]
 gi|222837227|gb|EEE75606.1| predicted protein [Populus trichocarpa]
          Length = 781

 Score =  498 bits (1282), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 280/765 (36%), Positives = 430/765 (56%), Gaps = 15/765 (1%)

Query: 29  HAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNEMP 88
           H  ++ HGF +DL     L +          AR LF  +P  +   +  +I G++ N MP
Sbjct: 23  HLNVLKHGFDSDLFLCNTLINVYVRIGDCVSARKLFDEMPDRNGVTWACLISGYTQNGMP 82

Query: 89  KSSICFYTHLRKNTALTPDNFTYSFVLSAASACCD----RSIGVLLHGHAIVSGYG-SDL 143
           + + C            P+ F +    SA  AC +    R  G  +HG+AI +G   + +
Sbjct: 83  EDA-CGVLKEMIFEGFLPNRFAFG---SAIRACQESMLWRRKGRQVHGYAIRTGLNDAKV 138

Query: 144 FVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRN 203
            VG  L+++Y K   +  AR VF  M +KD+V WNSMI+GL +N CF+D++  +  M R 
Sbjct: 139 AVGNGLINMYAKCGDIDHARSVFGLMVDKDSVSWNSMITGLDQNKCFEDAVKSYNSM-RK 197

Query: 204 GGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVER 263
            G    + ++ + L + A +  + LG +    G+KLG    V V   L++ Y++   +  
Sbjct: 198 TGLMPSNFALISALSSCASLGCILLGQQTHGEGIKLGLDMDVSVSNTLLALYAETSRLAE 257

Query: 264 AELLFRDIVRPDLISCNAMISGYTCNGKTES-SLRLFRQLLASAERVNSSTIVGLIPVFY 322
            + +F  ++  D +S N +I     +G + S ++ +F +++ +    N  T + L+    
Sbjct: 258 CQKVFSWMLERDQVSWNTVIGALADSGASVSEAIEVFLEMMRAGWSPNRVTFINLLATVS 317

Query: 323 PFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEK-SLASWN 381
                 L++ IH+  LK  +  ++++  AL   Y +  EME   ++F   SE+    SWN
Sbjct: 318 SLSTSKLSHQIHALILKYNVKDDNAIENALLACYGKSGEMENCEEIFSRMSERRDEVSWN 377

Query: 382 AMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSR 441
           +MI+GY  N L  +A+ L   M       +  T +++LSACA +  +  G  VH      
Sbjct: 378 SMISGYIHNELLCKAMDLVWLMMQRGQRLDCFTFATVLSACATVATLECGMEVHACAIRA 437

Query: 442 NFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLF 501
             ES++ + +AL+DMY+KCG I  A   F+LM  ++  +WN+MISGY  HGHG  AL+LF
Sbjct: 438 CLESDVVIGSALVDMYSKCGRIDYASRFFNLMPVRNLYSWNSMISGYARHGHGDNALRLF 497

Query: 502 SEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGR 561
           + M  SG  P  +TF+ VL ACSH GLV EG E F+SM   +G  P  EHY+CMVD+LGR
Sbjct: 498 TRMKLSGQLPDHITFVGVLSACSHIGLVDEGFEYFKSMTEVYGLVPRVEHYSCMVDLLGR 557

Query: 562 AGQLEKALEFIKGLAVEPGPAVWGALLGACMI--HKDTNLARVASEKLFELDPENVGYHV 619
           AG+L+K   FI  + ++P   +W  +LGAC     + T L R A+E LF +DP+N   +V
Sbjct: 558 AGELDKIENFINKMPIKPNILIWRTVLGACCRGNGRKTELGRRAAEMLFNMDPQNAVNYV 617

Query: 620 LLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYA 679
           LLSN+Y++   +   A  R+ +++  + K  GC+ + +    HVF +GD  HP+   IYA
Sbjct: 618 LLSNMYASGGKWEDMARTRRAMREAAVKKEAGCSWVTMKDGVHVFVAGDNSHPEKGLIYA 677

Query: 680 MLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIK 739
            L++L+ K+R+AG+  +   AL+D+E E KE ++  HSEKLA+AF ++    G  IRI+K
Sbjct: 678 KLKELDKKIRDAGYVPQIKFALYDLEPENKEELLSYHSEKLAVAF-VLTRNSGLPIRIMK 736

Query: 740 NLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           NLRVC DCH+A K+ISKV  R IV+RD+NRFHHF+ G CSC DYW
Sbjct: 737 NLRVCGDCHSAFKYISKVVDRSIVLRDSNRFHHFEDGKCSCRDYW 781



 Score =  178 bits (452), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 135/504 (26%), Positives = 241/504 (47%), Gaps = 17/504 (3%)

Query: 129 LLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNC 188
           L H + +  G+ SDLF+   L+++Y +     SARK+FD+MP+++ V W  +ISG  +N 
Sbjct: 21  LFHLNVLKHGFDSDLFLCNTLINVYVRIGDCVSARKLFDEMPDRNGVTWACLISGYTQNG 80

Query: 189 CFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHD-HVYV 247
             +D+  V  +M+  G         +A+      +   R G ++    ++ G +D  V V
Sbjct: 81  MPEDACGVLKEMIFEGFLPNRFAFGSAIRACQESMLWRRKGRQVHGYAIRTGLNDAKVAV 140

Query: 248 LTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAE 307
             GL++ Y+KCG+++ A  +F  +V  D +S N+MI+G   N   E +++ +  +  +  
Sbjct: 141 GNGLINMYAKCGDIDHARSVFGLMVDKDSVSWNSMITGLDQNKCFEDAVKSYNSMRKTGL 200

Query: 308 RVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARK 367
             ++  ++  +      G + L    H   +K G+  + SV   L  +Y+  + +   +K
Sbjct: 201 MPSNFALISALSSCASLGCILLGQQTHGEGIKLGLDMDVSVSNTLLALYAETSRLAECQK 260

Query: 368 LFDESSEKSLASWNAMIAGYTQNGLT-EEAISLFQEMQASKVAPNPVTVSSILSACAQLG 426
           +F    E+   SWN +I     +G +  EAI +F EM  +  +PN VT  ++L+  + L 
Sbjct: 261 VFSWMLERDQVSWNTVIGALADSGASVSEAIEVFLEMMRAGWSPNRVTFINLLATVSSLS 320

Query: 427 AISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMS-HKSEVTWNTMI 485
              L   +H L+   N + +  +  AL+  Y K G +    E+F  MS  + EV+WN+MI
Sbjct: 321 TSKLSHQIHALILKYNVKDDNAIENALLACYGKSGEMENCEEIFSRMSERRDEVSWNSMI 380

Query: 486 SGYGLHGHGL-EALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHG 544
           SGY +H   L +A+ L   M+  G R    TF +VL AC+    +  G E     +H   
Sbjct: 381 SGY-IHNELLCKAMDLVWLMMQRGQRLDCFTFATVLSACATVATLECGME-----VHACA 434

Query: 545 FKPLAEHY----ACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLG--ACMIHKDTN 598
            +   E      + +VD+  + G+++ A  F   + V      W +++   A   H D  
Sbjct: 435 IRACLESDVVIGSALVDMYSKCGRIDYASRFFNLMPVR-NLYSWNSMISGYARHGHGDNA 493

Query: 599 LARVASEKLFELDPENVGYHVLLS 622
           L      KL    P+++ +  +LS
Sbjct: 494 LRLFTRMKLSGQLPDHITFVGVLS 517



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 72/218 (33%), Positives = 116/218 (53%), Gaps = 7/218 (3%)

Query: 331 NCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQN 390
           N  H   LK G  S+  +   L  VY R+ +  +ARKLFDE  +++  +W  +I+GYTQN
Sbjct: 20  NLFHLNVLKHGFDSDLFLCNTLINVYVRIGDCVSARKLFDEMPDRNGVTWACLISGYTQN 79

Query: 391 GLTEEAISLFQEMQASKVAPNPVTVSSILSACAQ-LGAISLGKWVHEL-VKSRNFESNIY 448
           G+ E+A  + +EM      PN     S + AC + +     G+ VH   +++   ++ + 
Sbjct: 80  GMPEDACGVLKEMIFEGFLPNRFAFGSAIRACQESMLWRRKGRQVHGYAIRTGLNDAKVA 139

Query: 449 VSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSG 508
           V   LI+MYAKCG+I  AR +F LM  K  V+WN+MI+G   +    +A++ ++ M  +G
Sbjct: 140 VGNGLINMYAKCGDIDHARSVFGLMVDKDSVSWNSMITGLDQNKCFEDAVKSYNSMRKTG 199

Query: 509 IRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFK 546
           + PS    +S L +C+  G +  G +      H  G K
Sbjct: 200 LMPSNFALISALSSCASLGCILLGQQ-----THGEGIK 232


>gi|449520333|ref|XP_004167188.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g49142-like [Cucumis sativus]
          Length = 678

 Score =  498 bits (1281), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 245/623 (39%), Positives = 372/623 (59%), Gaps = 34/623 (5%)

Query: 162 ARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVA 221
           AR +FD+  EK+ V +N MI   + N  + +++ +F  M+       D  +   VL A +
Sbjct: 90  ARYIFDRSLEKNVVFFNVMIRSYVNNNLYVEALSIFQVMLSCAFN-PDHYTFPCVLKACS 148

Query: 222 EVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNA 281
            +  LR+G+++    +K+G   ++++   LV+ Y KCG +  A  +   +   D++S N+
Sbjct: 149 GLDNLRVGLQVHDAIVKVGLDTNLFIGNALVAMYGKCGCLREARKVLDQMPYRDVVSWNS 208

Query: 282 MISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSG 341
           M++GY  +G+ + +L + +++ +     ++ T+  L PV                     
Sbjct: 209 MVAGYAQSGQFDDALEICKEMDSLNLNHDAGTMASLSPV--------------------- 247

Query: 342 IVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQ 401
                         Y+ L  ++    +F+  ++K+L SWN MIA Y  N +  EA+SLF 
Sbjct: 248 ------------VCYTSLENVQYIHNMFERMTKKNLISWNVMIAIYVNNSMPNEAVSLFL 295

Query: 402 EMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCG 461
           +M+   + P+ VT++S+L AC  L A+ LG+ +H+ ++  N + N+ +  AL+DMYAKCG
Sbjct: 296 QMEECGMKPDAVTIASLLPACGDLSALFLGRRLHKYIEKGNLQPNLLLENALLDMYAKCG 355

Query: 462 NIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLY 521
            + EAR++FD M  +  V+W +M+S YG  G G +A+ LF++ML SG  P  + F+SVL 
Sbjct: 356 CLEEARDVFDKMRLRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGQNPDSIAFVSVLS 415

Query: 522 ACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGP 581
           ACSH GL+ +G   F+ M   +G  P  EH+ACMVD+ GRAG++E+A  FIK + +EP  
Sbjct: 416 ACSHTGLLDQGRHYFRMMTEQYGIVPRIEHFACMVDLFGRAGEVEEAYSFIKQMPMEPNE 475

Query: 582 AVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVV 641
            VWGALL AC +H   ++  VA++ LF+L P+  GY+VLLSNIY+    +     VR  +
Sbjct: 476 RVWGALLSACRVHSKMDIGLVAADLLFQLAPKQSGYYVLLSNIYAKAGMWKDVMNVRYAM 535

Query: 642 KKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTAL 701
           KK  + K PG + +E+ G  H F +GDQ HPQ+  IY  L+ L GKM+E G+  +T +AL
Sbjct: 536 KKIGIKKVPGISNVELNGQVHTFLAGDQYHPQAKNIYGELDVLVGKMKELGYIPQTESAL 595

Query: 702 HDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRV 761
           HDVE E+KE  + +HSEKLAI F ++ T+ GT IRI KNLRVC DCH A K ISK+  R 
Sbjct: 596 HDVEVEDKECHLAIHSEKLAIVFAILNTKQGTPIRITKNLRVCGDCHIAIKLISKIVSRN 655

Query: 762 IVVRDANRFHHFKGGVCSCGDYW 784
           I+VRD NRFHHF  G+CSCGDYW
Sbjct: 656 IIVRDCNRFHHFSNGICSCGDYW 678



 Score =  176 bits (445), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 132/519 (25%), Positives = 240/519 (46%), Gaps = 48/519 (9%)

Query: 11  LFLSLLKGAKTQSQLTQTHAQIIIHG-FQNDLSTVTKLAHRLSDFKATCYARALFFSIPK 69
           + L    G KT   L + H++I+I+   + D +   KL    S    T  AR +F    +
Sbjct: 43  VILDQYPGIKT---LNKLHSKIVINEHLRIDPTLAIKLMRAYSAQGETSVARYIFDRSLE 99

Query: 70  PDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVL 129
            ++  FNV+IR + NN +   ++  +  +  + A  PD++T+  VL A S   +  +G+ 
Sbjct: 100 KNVVFFNVMIRSYVNNNLYVEALSIF-QVMLSCAFNPDHYTFPCVLKACSGLDNLRVGLQ 158

Query: 130 LHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCC 189
           +H   +  G  ++LF+G ALV +Y K   ++ ARKV D+MP +D V WNSM++G  ++  
Sbjct: 159 VHDAIVKVGLDTNLFIGNALVAMYGKCGCLREARKVLDQMPYRDVVSWNSMVAGYAQSGQ 218

Query: 190 FQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLT 249
           F D++ +  +M  +     D+ ++A++ P V                             
Sbjct: 219 FDDALEICKEM-DSLNLNHDAGTMASLSPVVC---------------------------- 249

Query: 250 GLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERV 309
                Y+    V+    +F  + + +LIS N MI+ Y  N     ++ LF Q+     + 
Sbjct: 250 -----YTSLENVQYIHNMFERMTKKNLISWNVMIAIYVNNSMPNEAVSLFLQMEECGMKP 304

Query: 310 NSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLF 369
           ++ TI  L+P       L L   +H +  K  +  N  +  AL  +Y++   +E AR +F
Sbjct: 305 DAVTIASLLPACGDLSALFLGRRLHKYIEKGNLQPNLLLENALLDMYAKCGCLEEARDVF 364

Query: 370 DESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAIS 429
           D+   + + SW +M++ Y ++G   +A++LF +M  S   P+ +   S+LSAC+  G + 
Sbjct: 365 DKMRLRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGQNPDSIAFVSVLSACSHTGLLD 424

Query: 430 LGK-WVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMS-HKSEVTWNTMISG 487
            G+ +   + +       I     ++D++ + G + EA      M    +E  W  ++S 
Sbjct: 425 QGRHYFRMMTEQYGIVPRIEHFACMVDLFGRAGEVEEAYSFIKQMPMEPNERVWGALLSA 484

Query: 488 YGLHGH---GLEALQLFSEMLHSGIRPSG-VTFLSVLYA 522
             +H     GL A  L  ++     + SG    LS +YA
Sbjct: 485 CRVHSKMDIGLVAADLLFQL---APKQSGYYVLLSNIYA 520



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 76/340 (22%), Positives = 147/340 (43%), Gaps = 35/340 (10%)

Query: 251 LVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVN 310
           L+  YS  GE   A  +F   +  +++  N MI  Y  N     +L +F+ +L+ A   +
Sbjct: 77  LMRAYSAQGETSVARYIFDRSLEKNVVFFNVMIRSYVNNNLYVEALSIFQVMLSCAFNPD 136

Query: 311 SSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFD 370
             T   ++       +L +   +H   +K G+ +N  +  AL  +Y +   +  ARK+ D
Sbjct: 137 HYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLDTNLFIGNALVAMYGKCGCLREARKVLD 196

Query: 371 ESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISL 430
           +   + + SWN+M+AGY Q+G  ++A+ + +EM +  +                      
Sbjct: 197 QMPYRDVVSWNSMVAGYAQSGQFDDALEICKEMDSLNL---------------------- 234

Query: 431 GKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGL 490
                      N ++    S + +  Y    N+     +F+ M+ K+ ++WN MI+ Y  
Sbjct: 235 -----------NHDAGTMASLSPVVCYTSLENVQYIHNMFERMTKKNLISWNVMIAIYVN 283

Query: 491 HGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAE 550
           +    EA+ LF +M   G++P  VT  S+L AC     +  G  +    I     +P   
Sbjct: 284 NSMPNEAVSLFLQMEECGMKPDAVTIASLLPACGDLSALFLGRRL-HKYIEKGNLQPNLL 342

Query: 551 HYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGA 590
               ++D+  + G LE+A +    + +    + W +++ A
Sbjct: 343 LENALLDMYAKCGCLEEARDVFDKMRLRDVVS-WTSMMSA 381



 Score = 48.5 bits (114), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 33/115 (28%), Positives = 55/115 (47%)

Query: 426 GAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMI 485
           G  +L K   ++V + +   +  ++  L+  Y+  G    AR +FD    K+ V +N MI
Sbjct: 50  GIKTLNKLHSKIVINEHLRIDPTLAIKLMRAYSAQGETSVARYIFDRSLEKNVVFFNVMI 109

Query: 486 SGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMI 540
             Y  +   +EAL +F  ML     P   TF  VL ACS    +R G ++  +++
Sbjct: 110 RSYVNNNLYVEALSIFQVMLSCAFNPDHYTFPCVLKACSGLDNLRVGLQVHDAIV 164


>gi|395146511|gb|AFN53666.1| hypothetical protein [Linum usitatissimum]
          Length = 850

 Score =  497 bits (1280), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 264/685 (38%), Positives = 400/685 (58%), Gaps = 48/685 (7%)

Query: 140 GSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGD 199
            S+LF  AA    +  FS +  ARKVFD++P+ +   WN +I  L  +     S+ VF  
Sbjct: 174 ASELFTAAA----FSSFSALDYARKVFDQIPQPNLYSWNILIRALATSSDPIQSVLVFIR 229

Query: 200 MVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCG 259
           M+ +     +  +   ++ AVAE +   +G  +  + +K  F D V+VL  L+ FY+ CG
Sbjct: 230 MLHDSPFGPNKFTFPVLIKAVAERRCFLVGKAVHGMAIKTSFGDDVFVLNSLIHFYASCG 289

Query: 260 EVERAELLFRDIV--RPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGL 317
            ++ A L+F  I     D++S N+M++G+   G  + +L LF ++       N+ T+V +
Sbjct: 290 HLDLAYLVFEMIEGNNKDIVSWNSMVTGFVQGGYPDKALDLFERMRNEGVHPNAVTMVSV 349

Query: 318 -----------------------------------IPVFYPFGHLHLTNCIHSFCLKSGI 342
                                              I +F   G + +   +     K  +
Sbjct: 350 MSACAKTMNLTLGRKVCDYIDRNEMMMNLNVCNATIDMFVKCGEVEIARGLFDNMEKRDV 409

Query: 343 VSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQE 402
           VS ++++      Y++++E   AR +FD    K + +WN +I+GY Q+G  +EA+++F+E
Sbjct: 410 VSWTTIIDG----YAKMSEHGIARDIFDSMPRKDIPAWNVLISGYEQSGRPKEALAIFRE 465

Query: 403 MQASK--VAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKC 460
           +Q +K    P+ VT+ S LSACAQLGA+ +G+W+H  +K    + N  ++T+LIDMY+K 
Sbjct: 466 LQLTKSGARPDQVTLLSTLSACAQLGAMDIGEWIHGYIKKERIQLNRNLATSLIDMYSKS 525

Query: 461 GNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVL 520
           G++ +A E+F  + +K    W+ MI+G  +HG G  A++LF +M  + ++P+ VTF ++L
Sbjct: 526 GDVEKAIEVFHSIGNKDVFVWSAMIAGLAMHGRGEAAIELFLDMQETQVKPNSVTFTNLL 585

Query: 521 YACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPG 580
            ACSH+GLV EG  +F  M   +G  P  +HY+CMVD+LGRAG LE+AL+FI+G+ + P 
Sbjct: 586 CACSHSGLVDEGKRLFDEMERVYGVVPKTKHYSCMVDVLGRAGHLEEALKFIEGMPLAPS 645

Query: 581 PAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQV 640
            +VWGALLGAC IH +  LA  A  +L E++P N G +VLLSN+Y+   D+   + +RQ 
Sbjct: 646 ASVWGALLGACCIHGNLELAEKACSRLLEIEPGNHGAYVLLSNLYAKTGDWEGVSELRQQ 705

Query: 641 VKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTA 700
           ++   L K  GC+ IE+ GT H F  GD  HP S  IYA L+++  ++R  G+   T+  
Sbjct: 706 MRDSGLKKETGCSSIEIDGTVHEFIVGDNAHPLSRDIYAKLDEIMARLRSHGYVANTLCM 765

Query: 701 LHDVEEEE-KELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTG 759
           L  VEEEE KE  +K+HSEK+AIAFGLI  +    IRI+KNLRVC DCHT  K +SKV G
Sbjct: 766 LQFVEEEEMKEKALKLHSEKMAIAFGLIRADSQQAIRIVKNLRVCRDCHTVAKMVSKVYG 825

Query: 760 RVIVVRDANRFHHFKGGVCSCGDYW 784
           R IV+RD  RFHHF GG CSC DYW
Sbjct: 826 RDIVLRDRYRFHHFSGGHCSCQDYW 850



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 156/575 (27%), Positives = 271/575 (47%), Gaps = 48/575 (8%)

Query: 14  SLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKL--AHRLSDFKATCYARALFFSIPKPD 71
           +L +   +  QL Q HAQ++     +D    ++L  A   S F A  YAR +F  IP+P+
Sbjct: 144 ALFQQCTSFKQLKQIHAQMLRTNKLHDPYAASELFTAAAFSSFSALDYARKVFDQIPQPN 203

Query: 72  LFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLH 131
           L+ +N++IR  + +  P  S+  +  +  ++   P+ FT+  ++ A +      +G  +H
Sbjct: 204 LYSWNILIRALATSSDPIQSVLVFIRMLHDSPFGPNKFTFPVLIKAVAERRCFLVGKAVH 263

Query: 132 GHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMP--EKDTVLWNSMISGLMKNCC 189
           G AI + +G D+FV  +L+  Y     +  A  VF+ +    KD V WNSM++G ++   
Sbjct: 264 GMAIKTSFGDDVFVLNSLIHFYASCGHLDLAYLVFEMIEGNNKDIVSWNSMVTGFVQGGY 323

Query: 190 FQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLT 249
              ++ +F  M RN G   ++ ++ +V+ A A+   L LG ++     +     ++ V  
Sbjct: 324 PDKALDLFERM-RNEGVHPNAVTMVSVMSACAKTMNLTLGRKVCDYIDRNEMMMNLNVCN 382

Query: 250 GLVSFYSKCGEVERAELLF-----RDIV--------------------------RPDLIS 278
             +  + KCGEVE A  LF     RD+V                          R D+ +
Sbjct: 383 ATIDMFVKCGEVEIARGLFDNMEKRDVVSWTTIIDGYAKMSEHGIARDIFDSMPRKDIPA 442

Query: 279 CNAMISGYTCNGKTESSLRLFR--QLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSF 336
            N +ISGY  +G+ + +L +FR  QL  S  R +  T++  +      G + +   IH +
Sbjct: 443 WNVLISGYEQSGRPKEALAIFRELQLTKSGARPDQVTLLSTLSACAQLGAMDIGEWIHGY 502

Query: 337 CLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEA 396
             K  I  N ++ T+L  +YS+  ++E A ++F     K +  W+AMIAG   +G  E A
Sbjct: 503 IKKERIQLNRNLATSLIDMYSKSGDVEKAIEVFHSIGNKDVFVWSAMIAGLAMHGRGEAA 562

Query: 397 ISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWV-HELVKSRNFESNIYVSTALID 455
           I LF +MQ ++V PN VT +++L AC+  G +  GK +  E+ +           + ++D
Sbjct: 563 IELFLDMQETQVKPNSVTFTNLLCACSHSGLVDEGKRLFDEMERVYGVVPKTKHYSCMVD 622

Query: 456 MYAKCGNIVEARELFDLMS-HKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRP--- 511
           +  + G++ EA +  + M    S   W  ++    +HG+   A +  S +L   I P   
Sbjct: 623 VLGRAGHLEEALKFIEGMPLAPSASVWGALLGACCIHGNLELAEKACSRLLE--IEPGNH 680

Query: 512 SGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFK 546
                LS LYA +      EG    +  + D G K
Sbjct: 681 GAYVLLSNLYAKTGDW---EGVSELRQQMRDSGLK 712


>gi|30694644|ref|NP_191302.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|218525905|sp|Q7Y211.2|PP285_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g57430, chloroplastic; Flags: Precursor
 gi|332646133|gb|AEE79654.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 890

 Score =  497 bits (1280), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 287/801 (35%), Positives = 456/801 (56%), Gaps = 38/801 (4%)

Query: 12  FLSLLKGAKTQSQL---TQTHAQIIIHGFQND----LSTVTKLAHRLSDFKATCYARALF 64
           F +LLK       +    Q HA +   G+  D     +T+  L  +  DF A      +F
Sbjct: 100 FPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAV---YKVF 156

Query: 65  FSIPKPDLFLFNVIIRGFSNNEMPKSSI-CFYTHLRKNTALTPDNFTYSFVLSAASACCD 123
             I + +   +N +I    + E  + ++  F   L +N  + P +FT   ++S  +AC +
Sbjct: 157 DRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDEN--VEPSSFT---LVSVVTACSN 211

Query: 124 RSI------GVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLW 177
             +      G  +H + +  G  +  F+   LV +Y K   + S++ +      +D V W
Sbjct: 212 LPMPEGLMMGKQVHAYGLRKGELNS-FIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTW 270

Query: 178 NSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGL 237
           N+++S L +N    +++    +MV  G    D  ++++VLPA + ++ LR G E+    L
Sbjct: 271 NTVLSSLCQNEQLLEALEYLREMVLEG-VEPDEFTISSVLPACSHLEMLRTGKELHAYAL 329

Query: 238 KLG-FHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSL 296
           K G   ++ +V + LV  Y  C +V     +F  +    +   NAMI+GY+ N   + +L
Sbjct: 330 KNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEAL 389

Query: 297 RLFRQLLASAERV-NSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTV 355
            LF  +  SA  + NS+T+ G++P     G       IH F +K G+  +  V   L  +
Sbjct: 390 LLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDM 449

Query: 356 YSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQ---------AS 406
           YSRL +++ A ++F +  ++ L +WN MI GY  +   E+A+ L  +MQ         AS
Sbjct: 450 YSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGAS 509

Query: 407 KVA--PNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIV 464
           +V+  PN +T+ +IL +CA L A++ GK +H      N  +++ V +AL+DMYAKCG + 
Sbjct: 510 RVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQ 569

Query: 465 EARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACS 524
            +R++FD +  K+ +TWN +I  YG+HG+G EA+ L   M+  G++P+ VTF+SV  ACS
Sbjct: 570 MSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACS 629

Query: 525 HAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPA-V 583
           H+G+V EG  IF  M  D+G +P ++HYAC+VD+LGRAG++++A + +  +  +   A  
Sbjct: 630 HSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGA 689

Query: 584 WGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKK 643
           W +LLGA  IH +  +  +A++ L +L+P    ++VLL+NIYS+   + +A  VR+ +K+
Sbjct: 690 WSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKE 749

Query: 644 RKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHD 703
           + + K PGC+ IE G   H F +GD  HPQS  +   LE L  +MR+ G+  +T   LH+
Sbjct: 750 QGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKEGYVPDTSCVLHN 809

Query: 704 VEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIV 763
           VEE+EKE+++  HSEKLAIAFG++ T PGT IR+ KNLRVC DCH ATKFISK+  R I+
Sbjct: 810 VEEDEKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCHLATKFISKIVDREII 869

Query: 764 VRDANRFHHFKGGVCSCGDYW 784
           +RD  RFH FK G CSCGDYW
Sbjct: 870 LRDVRRFHRFKNGTCSCGDYW 890



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 140/512 (27%), Positives = 257/512 (50%), Gaps = 27/512 (5%)

Query: 103 ALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSD-LFVGAALVDLYFKFSWVKS 161
            + PDN+ +  +L A +   D  +G  +H H    GYG D + V   LV+LY K     +
Sbjct: 92  GIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGA 151

Query: 162 ARKVFDKMPEKDTVLWNSMISGLMKNCCFQD---SIWVFGDMVRNGGTWLDSTSVAAVLP 218
             KVFD++ E++ V WNS+IS L   C F+    ++  F  M+ +      S ++ +V+ 
Sbjct: 152 VYKVFDRISERNQVSWNSLISSL---CSFEKWEMALEAFRCML-DENVEPSSFTLVSVVT 207

Query: 219 AVAEV---QELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPD 275
           A + +   + L +G ++   GL+ G   + +++  LV+ Y K G++  +++L       D
Sbjct: 208 ACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRD 266

Query: 276 LISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHS 335
           L++ N ++S    N +   +L   R+++      +  TI  ++P       L     +H+
Sbjct: 267 LVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHA 326

Query: 336 FCLKSG-IVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTE 394
           + LK+G +  NS V +AL  +Y    ++ + R++FD   ++ +  WNAMIAGY+QN   +
Sbjct: 327 YALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDK 386

Query: 395 EAISLFQEMQASK-VAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTAL 453
           EA+ LF  M+ S  +  N  T++ ++ AC + GA S  + +H  V  R  + + +V   L
Sbjct: 387 EALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTL 446

Query: 454 IDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLH------- 506
           +DMY++ G I  A  +F  M  +  VTWNTMI+GY    H  +AL L  +M +       
Sbjct: 447 MDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSK 506

Query: 507 ----SGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRA 562
                 ++P+ +T +++L +C+    + +G EI    I ++    +A   A +VD+  + 
Sbjct: 507 GASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSA-LVDMYAKC 565

Query: 563 GQLEKALEFIKGLAVEPGPAVWGALLGACMIH 594
           G L+ + +    +  +     W  ++ A  +H
Sbjct: 566 GCLQMSRKVFDQIP-QKNVITWNVIIMAYGMH 596



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 44/155 (28%), Positives = 80/155 (51%), Gaps = 1/155 (0%)

Query: 372 SSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLG 431
           S  +S   W  ++    ++ L  EA+  + +M    + P+     ++L A A L  + LG
Sbjct: 57  SQSRSPEWWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELG 116

Query: 432 KWVHELVKSRNFE-SNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGL 490
           K +H  V    +   ++ V+  L+++Y KCG+     ++FD +S +++V+WN++IS    
Sbjct: 117 KQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCS 176

Query: 491 HGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSH 525
                 AL+ F  ML   + PS  T +SV+ ACS+
Sbjct: 177 FEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSN 211


>gi|449458017|ref|XP_004146744.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g49142-like [Cucumis sativus]
          Length = 678

 Score =  497 bits (1279), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 245/623 (39%), Positives = 371/623 (59%), Gaps = 34/623 (5%)

Query: 162 ARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVA 221
           AR +FD+  EK+ V +N MI   + N  + +++ +F  M+       D  +   VL A +
Sbjct: 90  ARYIFDRSLEKNVVFFNVMIRSYVNNNLYVEALSIFQVMLSCAFN-PDHYTFPCVLKACS 148

Query: 222 EVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNA 281
            +  LR+G+++    +K+G   ++++   LV+ Y KCG +  A  +   +   D++S N+
Sbjct: 149 GLDNLRVGLQVHDAIVKVGLDTNLFIGNALVAMYGKCGCLREARKVLDQMPYRDVVSWNS 208

Query: 282 MISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSG 341
           M++GY  +G+ + +L + +++ +     ++ T+  L PV                     
Sbjct: 209 MVAGYAQSGQFDDALEICKEMDSLNLNHDAGTMASLSPV--------------------- 247

Query: 342 IVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQ 401
                         Y+ L  ++    +F+  ++K+L SWN MIA Y  N +  EA+SLF 
Sbjct: 248 ------------VCYTSLENVQYIHNMFERMTKKNLISWNVMIAIYVNNSMPNEAVSLFL 295

Query: 402 EMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCG 461
           +M+   + P+ VT++S+L AC  L A+ LG+ +H+ ++  N   N+ +  AL+DMYAKCG
Sbjct: 296 QMEECGMKPDAVTIASLLPACGDLSALFLGRRLHKYIEKGNLRPNLLLENALLDMYAKCG 355

Query: 462 NIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLY 521
            + EAR++FD M  +  V+W +M+S YG  G G +A+ LF++ML SG  P  + F+SVL 
Sbjct: 356 CLEEARDVFDKMRLRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGQNPDSIAFVSVLS 415

Query: 522 ACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGP 581
           ACSH GL+ +G   F+ M   +G  P  EH+ACMVD+ GRAG++E+A  FIK + +EP  
Sbjct: 416 ACSHTGLLDQGRHYFRMMTEQYGIVPRIEHFACMVDLFGRAGEVEEAYSFIKQMPMEPNE 475

Query: 582 AVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVV 641
            VWGALL AC +H   ++  VA++ LF+L P+  GY+VLLSNIY+    +     VR  +
Sbjct: 476 RVWGALLSACRVHSKMDIGLVAADLLFQLAPKQSGYYVLLSNIYAKAGMWKDVMNVRYAM 535

Query: 642 KKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTAL 701
           KK  + K PG + +E+ G  H F +GDQ HPQ+  IY  L+ L GKM+E G+  +T +AL
Sbjct: 536 KKIGIKKVPGISNVELNGQVHTFLAGDQYHPQAKNIYGELDVLVGKMKELGYIPQTESAL 595

Query: 702 HDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRV 761
           HDVE E+KE  + +HSEKLAI F ++ T+ GT IRI KNLRVC DCH A K ISK+  R 
Sbjct: 596 HDVEVEDKECHLAIHSEKLAIVFAILNTKQGTPIRITKNLRVCGDCHIAIKLISKIVSRN 655

Query: 762 IVVRDANRFHHFKGGVCSCGDYW 784
           I+VRD NRFHHF  G+CSCGDYW
Sbjct: 656 IIVRDCNRFHHFSNGICSCGDYW 678



 Score =  176 bits (445), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 132/519 (25%), Positives = 240/519 (46%), Gaps = 48/519 (9%)

Query: 11  LFLSLLKGAKTQSQLTQTHAQIIIHG-FQNDLSTVTKLAHRLSDFKATCYARALFFSIPK 69
           + L    G KT   L + H++I+I+   + D +   KL    S    T  AR +F    +
Sbjct: 43  VILDQYPGIKT---LNKLHSKIVINEHLRIDPTLAIKLMRAYSAQGETSVARYIFDRSLE 99

Query: 70  PDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVL 129
            ++  FNV+IR + NN +   ++  +  +  + A  PD++T+  VL A S   +  +G+ 
Sbjct: 100 KNVVFFNVMIRSYVNNNLYVEALSIF-QVMLSCAFNPDHYTFPCVLKACSGLDNLRVGLQ 158

Query: 130 LHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCC 189
           +H   +  G  ++LF+G ALV +Y K   ++ ARKV D+MP +D V WNSM++G  ++  
Sbjct: 159 VHDAIVKVGLDTNLFIGNALVAMYGKCGCLREARKVLDQMPYRDVVSWNSMVAGYAQSGQ 218

Query: 190 FQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLT 249
           F D++ +  +M  +     D+ ++A++ P V                             
Sbjct: 219 FDDALEICKEM-DSLNLNHDAGTMASLSPVVC---------------------------- 249

Query: 250 GLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERV 309
                Y+    V+    +F  + + +LIS N MI+ Y  N     ++ LF Q+     + 
Sbjct: 250 -----YTSLENVQYIHNMFERMTKKNLISWNVMIAIYVNNSMPNEAVSLFLQMEECGMKP 304

Query: 310 NSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLF 369
           ++ TI  L+P       L L   +H +  K  +  N  +  AL  +Y++   +E AR +F
Sbjct: 305 DAVTIASLLPACGDLSALFLGRRLHKYIEKGNLRPNLLLENALLDMYAKCGCLEEARDVF 364

Query: 370 DESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAIS 429
           D+   + + SW +M++ Y ++G   +A++LF +M  S   P+ +   S+LSAC+  G + 
Sbjct: 365 DKMRLRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGQNPDSIAFVSVLSACSHTGLLD 424

Query: 430 LGK-WVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMS-HKSEVTWNTMISG 487
            G+ +   + +       I     ++D++ + G + EA      M    +E  W  ++S 
Sbjct: 425 QGRHYFRMMTEQYGIVPRIEHFACMVDLFGRAGEVEEAYSFIKQMPMEPNERVWGALLSA 484

Query: 488 YGLHGH---GLEALQLFSEMLHSGIRPSG-VTFLSVLYA 522
             +H     GL A  L  ++     + SG    LS +YA
Sbjct: 485 CRVHSKMDIGLVAADLLFQL---APKQSGYYVLLSNIYA 520



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 76/340 (22%), Positives = 147/340 (43%), Gaps = 35/340 (10%)

Query: 251 LVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVN 310
           L+  YS  GE   A  +F   +  +++  N MI  Y  N     +L +F+ +L+ A   +
Sbjct: 77  LMRAYSAQGETSVARYIFDRSLEKNVVFFNVMIRSYVNNNLYVEALSIFQVMLSCAFNPD 136

Query: 311 SSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFD 370
             T   ++       +L +   +H   +K G+ +N  +  AL  +Y +   +  ARK+ D
Sbjct: 137 HYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLDTNLFIGNALVAMYGKCGCLREARKVLD 196

Query: 371 ESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISL 430
           +   + + SWN+M+AGY Q+G  ++A+ + +EM +  +                      
Sbjct: 197 QMPYRDVVSWNSMVAGYAQSGQFDDALEICKEMDSLNL---------------------- 234

Query: 431 GKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGL 490
                      N ++    S + +  Y    N+     +F+ M+ K+ ++WN MI+ Y  
Sbjct: 235 -----------NHDAGTMASLSPVVCYTSLENVQYIHNMFERMTKKNLISWNVMIAIYVN 283

Query: 491 HGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAE 550
           +    EA+ LF +M   G++P  VT  S+L AC     +  G  +    I     +P   
Sbjct: 284 NSMPNEAVSLFLQMEECGMKPDAVTIASLLPACGDLSALFLGRRL-HKYIEKGNLRPNLL 342

Query: 551 HYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGA 590
               ++D+  + G LE+A +    + +    + W +++ A
Sbjct: 343 LENALLDMYAKCGCLEEARDVFDKMRLRDVVS-WTSMMSA 381



 Score = 48.5 bits (114), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 33/115 (28%), Positives = 55/115 (47%)

Query: 426 GAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMI 485
           G  +L K   ++V + +   +  ++  L+  Y+  G    AR +FD    K+ V +N MI
Sbjct: 50  GIKTLNKLHSKIVINEHLRIDPTLAIKLMRAYSAQGETSVARYIFDRSLEKNVVFFNVMI 109

Query: 486 SGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMI 540
             Y  +   +EAL +F  ML     P   TF  VL ACS    +R G ++  +++
Sbjct: 110 RSYVNNNLYVEALSIFQVMLSCAFNPDHYTFPCVLKACSGLDNLRVGLQVHDAIV 164


>gi|30794008|gb|AAP40452.1| unknown protein [Arabidopsis thaliana]
          Length = 890

 Score =  497 bits (1279), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 287/801 (35%), Positives = 456/801 (56%), Gaps = 38/801 (4%)

Query: 12  FLSLLKGAKTQSQL---TQTHAQIIIHGFQND----LSTVTKLAHRLSDFKATCYARALF 64
           F +LLK       +    Q HA +   G+  D     +T+  L  +  DF A      +F
Sbjct: 100 FPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAV---YKVF 156

Query: 65  FSIPKPDLFLFNVIIRGFSNNEMPKSSI-CFYTHLRKNTALTPDNFTYSFVLSAASACCD 123
             I + +   +N +I    + E  + ++  F   L +N  + P +FT   ++S  +AC +
Sbjct: 157 DRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDEN--VEPSSFT---LVSVVTACSN 211

Query: 124 RSI------GVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLW 177
             +      G  +H + +  G  +  F+   LV +Y K   + S++ +      +D V W
Sbjct: 212 LPMPEGLMMGKQVHAYGLRKGELNS-FIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTW 270

Query: 178 NSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGL 237
           N+++S L +N    +++    +MV  G    D  ++++VLPA + ++ LR G E+    L
Sbjct: 271 NTVLSSLCQNEQLLEALEYLREMVLEG-VEPDEFTISSVLPACSHLEMLRTGKELHAYAL 329

Query: 238 KLG-FHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSL 296
           K G   ++ +V + LV  Y  C +V     +F  +    +   NAMI+GY+ N   + +L
Sbjct: 330 KNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEAL 389

Query: 297 RLFRQLLASAERV-NSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTV 355
            LF  +  SA  + NS+T+ G++P     G       IH F +K G+  +  V   L  +
Sbjct: 390 LLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDM 449

Query: 356 YSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQ---------AS 406
           YSRL +++ A ++F +  ++ L +WN MI GY  +   E+A+ L  +MQ         AS
Sbjct: 450 YSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGAS 509

Query: 407 KVA--PNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIV 464
           +V+  PN +T+ +IL +CA L A++ GK +H      N  +++ V +AL+DMYAKCG + 
Sbjct: 510 RVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQ 569

Query: 465 EARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACS 524
            +R++FD +  K+ +TWN +I  YG+HG+G EA+ L   M+  G++P+ VTF+SV  ACS
Sbjct: 570 MSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACS 629

Query: 525 HAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPA-V 583
           H+G+V EG  IF  M  D+G +P ++HYAC+VD+LGRAG++++A + +  +  +   A  
Sbjct: 630 HSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGA 689

Query: 584 WGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKK 643
           W +LLGA  IH +  +  +A++ L +L+P    ++VLL+NIYS+   + +A  VR+ +K+
Sbjct: 690 WSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKE 749

Query: 644 RKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHD 703
           + + K PGC+ IE G   H F +GD  HPQS  +   LE L  +MR+ G+  +T   LH+
Sbjct: 750 QGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKEGYVPDTSCVLHN 809

Query: 704 VEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIV 763
           VEE+EKE+++  HSEKLAIAFG++ T PGT IR+ KNLRVC DCH ATKFISK+  R I+
Sbjct: 810 VEEDEKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCHLATKFISKIVDREII 869

Query: 764 VRDANRFHHFKGGVCSCGDYW 784
           +RD  RFH FK G CSCGDYW
Sbjct: 870 LRDVRRFHRFKNGTCSCGDYW 890



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 140/512 (27%), Positives = 257/512 (50%), Gaps = 27/512 (5%)

Query: 103 ALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSD-LFVGAALVDLYFKFSWVKS 161
            + PDN+ +  +L A +   D  +G  +H H    GYG D + V   LV+LY K     +
Sbjct: 92  GIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGA 151

Query: 162 ARKVFDKMPEKDTVLWNSMISGLMKNCCFQD---SIWVFGDMVRNGGTWLDSTSVAAVLP 218
             KVFD++ E++ V WNS+IS L   C F+    ++  F  M+ +      S ++ +V+ 
Sbjct: 152 VYKVFDRISERNQVSWNSLISSL---CSFEKWEMALEAFRCML-DENVEPSSFTLVSVVT 207

Query: 219 AVAEV---QELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPD 275
           A + +   + L +G ++   GL+ G   + +++  LV+ Y K G++  +++L       D
Sbjct: 208 ACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRD 266

Query: 276 LISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHS 335
           L++ N ++S    N +   +L   R+++      +  TI  ++P       L     +H+
Sbjct: 267 LVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHA 326

Query: 336 FCLKSG-IVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTE 394
           + LK+G +  NS V +AL  +Y    ++ + R++FD   ++ +  WNAMIAGY+QN   +
Sbjct: 327 YALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDK 386

Query: 395 EAISLFQEMQASK-VAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTAL 453
           EA+ LF  M+ S  +  N  T++ ++ AC + GA S  + +H  V  R  + + +V   L
Sbjct: 387 EALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTL 446

Query: 454 IDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLH------- 506
           +DMY++ G I  A  +F  M  +  VTWNTMI+GY    H  +AL L  +M +       
Sbjct: 447 MDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSK 506

Query: 507 ----SGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRA 562
                 ++P+ +T +++L +C+    + +G EI    I ++    +A   A +VD+  + 
Sbjct: 507 GASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSA-LVDMYAKC 565

Query: 563 GQLEKALEFIKGLAVEPGPAVWGALLGACMIH 594
           G L+ + +    +  +     W  ++ A  +H
Sbjct: 566 GCLQMSRKVFDQIP-QKNVITWNVIIMAYGMH 596



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 44/155 (28%), Positives = 80/155 (51%), Gaps = 1/155 (0%)

Query: 372 SSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLG 431
           S  +S   W  ++    ++ L  EA+  + +M    + P+     ++L A A L  + LG
Sbjct: 57  SQSRSPEWWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELG 116

Query: 432 KWVHELVKSRNFE-SNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGL 490
           K +H  V    +   ++ V+  L+++Y KCG+     ++FD +S +++V+WN++IS    
Sbjct: 117 KQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCS 176

Query: 491 HGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSH 525
                 AL+ F  ML   + PS  T +SV+ ACS+
Sbjct: 177 FEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSN 211


>gi|224132926|ref|XP_002321443.1| predicted protein [Populus trichocarpa]
 gi|222868439|gb|EEF05570.1| predicted protein [Populus trichocarpa]
          Length = 723

 Score =  497 bits (1279), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 271/723 (37%), Positives = 430/723 (59%), Gaps = 10/723 (1%)

Query: 69  KPDLFLFNVIIRGFSNNEMPKSSI-CFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIG 127
           K DL  ++ +I  ++NNE    +I  F+  L       P+ + ++ V  A S   + S+G
Sbjct: 4   KRDLVSWSALISCYANNEKAFEAISAFFDMLE--CGFYPNEYCFTGVFRACSNKENISLG 61

Query: 128 VLLHGHAIVSGY-GSDLFVGAALVDLYFKFSW-VKSARKVFDKMPEKDTVLWNSMISGLM 185
            ++ G  + +GY  SD+ VG AL+D++ K +  ++SA KVFD+MP+++ V W  MI+   
Sbjct: 62  KIIFGFLLKTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRMPDRNVVTWTLMITRFQ 121

Query: 186 KNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHV 245
           +    +D++ +F DMV +G    D  +++ V+ A AE+  L LG +  CL +K G    V
Sbjct: 122 QLGFSRDAVDLFLDMVLSGYV-PDRFTLSGVVSACAEMGLLSLGRQFHCLVMKSGLDLDV 180

Query: 246 YVLTGLVSFYSKC---GEVERAELLFRDIVRPDLISCNAMISGYTCNGKTE-SSLRLFRQ 301
            V   LV  Y+KC   G V+ A  +F  +   +++S  A+I+GY  +G  +  ++ LF +
Sbjct: 181 CVGCSLVDMYAKCVADGSVDDARKVFDRMPVHNVMSWTAIITGYVQSGGCDREAIELFLE 240

Query: 302 LLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNE 361
           ++    + N  T   ++        + L   +++  +K  + S + V  +L ++YSR   
Sbjct: 241 MVQGQVKPNHFTFSSVLKACANLSDIWLGEQVYALVVKMRLASINCVGNSLISMYSRCGN 300

Query: 362 MEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSA 421
           ME ARK FD   EK+L S+N ++  Y ++  +EEA  LF E++ +    N  T +S+LS 
Sbjct: 301 MENARKAFDVLFEKNLVSYNTIVNAYAKSLNSEEAFELFNEIEGAGTGVNAFTFASLLSG 360

Query: 422 CAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTW 481
            + +GAI  G+ +H  +    F+SN+++  ALI MY++CGNI  A ++F+ M   + ++W
Sbjct: 361 ASSIGAIGKGEQIHSRILKSGFKSNLHICNALISMYSRCGNIEAAFQVFNEMGDGNVISW 420

Query: 482 NTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIH 541
            +MI+G+  HG    AL+ F +ML +G+ P+ VT+++VL ACSH GL+ EG + F+SM  
Sbjct: 421 TSMITGFAKHGFATRALETFHKMLEAGVSPNEVTYIAVLSACSHVGLISEGLKHFKSMKV 480

Query: 542 DHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLAR 601
           +HG  P  EHYAC+VD+LGR+G LE+A+E +  +  +    V    LGAC +H + +L +
Sbjct: 481 EHGIVPRMEHYACVVDLLGRSGHLEEAMELVNSMPFKADALVLRTFLGACRVHGNMDLGK 540

Query: 602 VASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTP 661
            A+E + E DP +   ++LLSN++++   + + A +R+ +K+R L K  GC+ IEV    
Sbjct: 541 HAAEMILEQDPHDPAAYILLSNLHASAGQWEEVAEIRKKMKERNLTKEAGCSWIEVENKV 600

Query: 662 HVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLA 721
           H F  GD  HPQ+  IY  L++L  K++E G+   T   LHDVEEE+KE  +  HSEK+A
Sbjct: 601 HKFYVGDTSHPQAQEIYDELDQLALKIKELGYIPSTDFVLHDVEEEQKEQYLFQHSEKIA 660

Query: 722 IAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCG 781
           +A+G I+T     IR+ KNLRVC DCHTA K+ S V  + IV+RDANRFHHFK G CSC 
Sbjct: 661 VAYGFISTSTSRPIRVFKNLRVCGDCHTAFKYFSIVRRKEIVLRDANRFHHFKDGTCSCN 720

Query: 782 DYW 784
           DYW
Sbjct: 721 DYW 723



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 61/175 (34%), Positives = 95/175 (54%), Gaps = 3/175 (1%)

Query: 373 SEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGK 432
           +++ L SW+A+I+ Y  N    EAIS F +M      PN    + +  AC+    ISLGK
Sbjct: 3   NKRDLVSWSALISCYANNEKAFEAISAFFDMLECGFYPNEYCFTGVFRACSNKENISLGK 62

Query: 433 WVHE-LVKSRNFESNIYVSTALIDMYAKC-GNIVEARELFDLMSHKSEVTWNTMISGYGL 490
            +   L+K+  FES++ V  ALIDM+ K  G++  A ++FD M  ++ VTW  MI+ +  
Sbjct: 63  IIFGFLLKTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRMPDRNVVTWTLMITRFQQ 122

Query: 491 HGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGF 545
            G   +A+ LF +M+ SG  P   T   V+ AC+  GL+  G + F  ++   G 
Sbjct: 123 LGFSRDAVDLFLDMVLSGYVPDRFTLSGVVSACAEMGLLSLGRQ-FHCLVMKSGL 176


>gi|413922867|gb|AFW62799.1| putative pentatricopeptide repeat family protein [Zea mays]
          Length = 882

 Score =  497 bits (1279), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 268/712 (37%), Positives = 400/712 (56%), Gaps = 4/712 (0%)

Query: 75  FNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHA 134
           +N +I  +  N+    +I  +  +   +   P+ F +S V++A +   D   G  +HG  
Sbjct: 173 WNTMISAYVKNDQSGDAIGVFREMVW-SGERPNEFGFSCVVNACTGSRDLEAGRQVHGAV 231

Query: 135 IVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSI 194
           + +GY  D+F   ALVD+Y K   ++ A  VF+KMP  D V WN+ ISG + +     ++
Sbjct: 232 VRTGYEKDVFTANALVDMYSKLGDIEMAATVFEKMPAADVVSWNAFISGCVTHGHDHRAL 291

Query: 195 WVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSF 254
            +   M ++ G   +  ++++VL A A      LG +I    +K       +V  GLV  
Sbjct: 292 ELLLQM-KSSGLVPNVFTLSSVLKACAGAGAFNLGRQIHGFMVKAVADFDEFVAVGLVDM 350

Query: 255 YSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAER--VNSS 312
           Y+K G ++ A  +F  + R DLI  NA+ISG + +G+    L LF ++        VN +
Sbjct: 351 YAKHGFLDDARKVFDFMPRRDLILWNALISGCSHDGRHGEVLSLFHRMRKEGLDLDVNRT 410

Query: 313 TIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDES 372
           T+  ++        +  T  +H+   K G++S+S V+  L   Y +  +++ A K+F ES
Sbjct: 411 TLASVLKSTASSEAICHTRQVHALAEKIGLLSDSHVINGLIDSYWKCGQLDYAIKVFKES 470

Query: 373 SEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGK 432
               + S   M+   +Q    E+AI LF +M    + P+   +SS+L+AC  L A   GK
Sbjct: 471 RSDDIISSTTMMTALSQCDHGEDAIKLFVQMLRKGLEPDSFVLSSLLNACTSLSAYEQGK 530

Query: 433 WVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHG 492
            VH  +  R F S+++   AL+  YAKCG+I +A   F  +  +  V+W+ MI G   HG
Sbjct: 531 QVHAHLIKRQFTSDVFAGNALVYAYAKCGSIEDADMAFSGLPERGIVSWSAMIGGLAQHG 590

Query: 493 HGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHY 552
           HG  AL LF  ML  G+ P+ +T  SVL AC+HAGLV +  + F+SM    G     EHY
Sbjct: 591 HGKRALDLFHRMLDEGVAPNHITLTSVLSACNHAGLVDDAKKYFESMKETFGIDRTEEHY 650

Query: 553 ACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDP 612
           ACM+DILGRAG+LE A+E +  +  +   AVWGALLGA  +H+D  L R+A+EKLF L+P
Sbjct: 651 ACMIDILGRAGKLEDAMELVNNMPFQANAAVWGALLGASRVHRDPELGRMAAEKLFTLEP 710

Query: 613 ENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHP 672
           E  G HVLL+N Y++   + + A VR+++K   + K P  + +E+    H F  GD+ HP
Sbjct: 711 EKSGTHVLLANTYASAGMWDEMAKVRKLMKDSNVKKEPAMSWVEIKDKVHTFIVGDKSHP 770

Query: 673 QSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPG 732
            +  IY  L +L   M +AG+       LHDV+  EKEL++  HSE+LA+AF LI+T  G
Sbjct: 771 MTRDIYGKLAELGDLMNKAGYVPNVEVDLHDVDRSEKELLLSHHSERLAVAFALISTPSG 830

Query: 733 TEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
             IR+ KNLR+C DCH A K+ISK+  R I++RD NRFHHF  G CSCGDYW
Sbjct: 831 APIRVKKNLRICRDCHVAFKYISKIVSREIIIRDINRFHHFTNGTCSCGDYW 882



 Score =  226 bits (575), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 179/638 (28%), Positives = 295/638 (46%), Gaps = 31/638 (4%)

Query: 3   MKTPQSRNLFL-------SLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFK 55
           M+TP++    L       SL  GA   S L ++    ++ GF N L T+       S  +
Sbjct: 1   MRTPETIGSALARFGTSRSLFAGAHLHSHLLKSG---LLAGFSNHLLTL------YSRCR 51

Query: 56  ATCYARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVL 115
               ARA+F  IP P    ++ ++  +SNN MP+ ++  +  +R    +  + F    VL
Sbjct: 52  LPSAARAVFDEIPDPCHVSWSSLVTAYSNNGMPRDALLAFRAMR-GRGVPCNEFALPVVL 110

Query: 116 SAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKM----PE 171
             A    D   G  +H  A+ +    D+FV  ALV +Y  F  V  AR++FD+      E
Sbjct: 111 KCAP---DVRFGAQVHALAVATRLVHDVFVANALVAVYGGFGMVDEARRMFDEYVGVGGE 167

Query: 172 KDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGME 231
           ++ V WN+MIS  +KN    D+I VF +MV + G   +    + V+ A    ++L  G +
Sbjct: 168 RNAVSWNTMISAYVKNDQSGDAIGVFREMVWS-GERPNEFGFSCVVNACTGSRDLEAGRQ 226

Query: 232 IQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGK 291
           +    ++ G+   V+    LV  YSK G++E A  +F  +   D++S NA ISG   +G 
Sbjct: 227 VHGAVVRTGYEKDVFTANALVDMYSKLGDIEMAATVFEKMPAADVVSWNAFISGCVTHGH 286

Query: 292 TESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTA 351
              +L L  Q+ +S    N  T+  ++      G  +L   IH F +K+    +  V   
Sbjct: 287 DHRALELLLQMKSSGLVPNVFTLSSVLKACAGAGAFNLGRQIHGFMVKAVADFDEFVAVG 346

Query: 352 LSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQAS--KVA 409
           L  +Y++   ++ ARK+FD    + L  WNA+I+G + +G   E +SLF  M+     + 
Sbjct: 347 LVDMYAKHGFLDDARKVFDFMPRRDLILWNALISGCSHDGRHGEVLSLFHRMRKEGLDLD 406

Query: 410 PNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEAREL 469
            N  T++S+L + A   AI   + VH L +     S+ +V   LID Y KCG +  A ++
Sbjct: 407 VNRTTLASVLKSTASSEAICHTRQVHALAEKIGLLSDSHVINGLIDSYWKCGQLDYAIKV 466

Query: 470 FDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLV 529
           F        ++  TM++      HG +A++LF +ML  G+ P      S+L AC+     
Sbjct: 467 FKESRSDDIISSTTMMTALSQCDHGEDAIKLFVQMLRKGLEPDSFVLSSLLNACTSLSAY 526

Query: 530 REGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLG 589
            +G ++   +I    F         +V    + G +E A     GL  E G   W A++G
Sbjct: 527 EQGKQVHAHLIKRQ-FTSDVFAGNALVYAYAKCGSIEDADMAFSGLP-ERGIVSWSAMIG 584

Query: 590 ACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSA 627
               H     A     ++  LD      H+ L+++ SA
Sbjct: 585 GLAQHGHGKRALDLFHRM--LDEGVAPNHITLTSVLSA 620


>gi|6706414|emb|CAB66100.1| putative protein [Arabidopsis thaliana]
          Length = 803

 Score =  497 bits (1279), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 287/801 (35%), Positives = 456/801 (56%), Gaps = 38/801 (4%)

Query: 12  FLSLLKGAKTQSQL---TQTHAQIIIHGFQND----LSTVTKLAHRLSDFKATCYARALF 64
           F +LLK       +    Q HA +   G+  D     +T+  L  +  DF A      +F
Sbjct: 13  FPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAV---YKVF 69

Query: 65  FSIPKPDLFLFNVIIRGFSNNEMPKSSI-CFYTHLRKNTALTPDNFTYSFVLSAASACCD 123
             I + +   +N +I    + E  + ++  F   L +N  + P +FT   ++S  +AC +
Sbjct: 70  DRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDEN--VEPSSFT---LVSVVTACSN 124

Query: 124 RSI------GVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLW 177
             +      G  +H + +  G  +  F+   LV +Y K   + S++ +      +D V W
Sbjct: 125 LPMPEGLMMGKQVHAYGLRKGELNS-FIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTW 183

Query: 178 NSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGL 237
           N+++S L +N    +++    +MV  G    D  ++++VLPA + ++ LR G E+    L
Sbjct: 184 NTVLSSLCQNEQLLEALEYLREMVLEG-VEPDEFTISSVLPACSHLEMLRTGKELHAYAL 242

Query: 238 KLG-FHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSL 296
           K G   ++ +V + LV  Y  C +V     +F  +    +   NAMI+GY+ N   + +L
Sbjct: 243 KNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEAL 302

Query: 297 RLFRQLLASAERV-NSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTV 355
            LF  +  SA  + NS+T+ G++P     G       IH F +K G+  +  V   L  +
Sbjct: 303 LLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDM 362

Query: 356 YSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQ---------AS 406
           YSRL +++ A ++F +  ++ L +WN MI GY  +   E+A+ L  +MQ         AS
Sbjct: 363 YSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGAS 422

Query: 407 KVA--PNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIV 464
           +V+  PN +T+ +IL +CA L A++ GK +H      N  +++ V +AL+DMYAKCG + 
Sbjct: 423 RVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQ 482

Query: 465 EARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACS 524
            +R++FD +  K+ +TWN +I  YG+HG+G EA+ L   M+  G++P+ VTF+SV  ACS
Sbjct: 483 MSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACS 542

Query: 525 HAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPA-V 583
           H+G+V EG  IF  M  D+G +P ++HYAC+VD+LGRAG++++A + +  +  +   A  
Sbjct: 543 HSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGA 602

Query: 584 WGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKK 643
           W +LLGA  IH +  +  +A++ L +L+P    ++VLL+NIYS+   + +A  VR+ +K+
Sbjct: 603 WSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKE 662

Query: 644 RKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHD 703
           + + K PGC+ IE G   H F +GD  HPQS  +   LE L  +MR+ G+  +T   LH+
Sbjct: 663 QGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKEGYVPDTSCVLHN 722

Query: 704 VEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIV 763
           VEE+EKE+++  HSEKLAIAFG++ T PGT IR+ KNLRVC DCH ATKFISK+  R I+
Sbjct: 723 VEEDEKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCHLATKFISKIVDREII 782

Query: 764 VRDANRFHHFKGGVCSCGDYW 784
           +RD  RFH FK G CSCGDYW
Sbjct: 783 LRDVRRFHRFKNGTCSCGDYW 803



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 140/512 (27%), Positives = 257/512 (50%), Gaps = 27/512 (5%)

Query: 103 ALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSD-LFVGAALVDLYFKFSWVKS 161
            + PDN+ +  +L A +   D  +G  +H H    GYG D + V   LV+LY K     +
Sbjct: 5   GIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGA 64

Query: 162 ARKVFDKMPEKDTVLWNSMISGLMKNCCFQD---SIWVFGDMVRNGGTWLDSTSVAAVLP 218
             KVFD++ E++ V WNS+IS L   C F+    ++  F  M+ +      S ++ +V+ 
Sbjct: 65  VYKVFDRISERNQVSWNSLISSL---CSFEKWEMALEAFRCML-DENVEPSSFTLVSVVT 120

Query: 219 AVAEV---QELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPD 275
           A + +   + L +G ++   GL+ G   + +++  LV+ Y K G++  +++L       D
Sbjct: 121 ACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRD 179

Query: 276 LISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHS 335
           L++ N ++S    N +   +L   R+++      +  TI  ++P       L     +H+
Sbjct: 180 LVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHA 239

Query: 336 FCLKSG-IVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTE 394
           + LK+G +  NS V +AL  +Y    ++ + R++FD   ++ +  WNAMIAGY+QN   +
Sbjct: 240 YALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDK 299

Query: 395 EAISLFQEMQASK-VAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTAL 453
           EA+ LF  M+ S  +  N  T++ ++ AC + GA S  + +H  V  R  + + +V   L
Sbjct: 300 EALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTL 359

Query: 454 IDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLH------- 506
           +DMY++ G I  A  +F  M  +  VTWNTMI+GY    H  +AL L  +M +       
Sbjct: 360 MDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSK 419

Query: 507 ----SGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRA 562
                 ++P+ +T +++L +C+    + +G EI    I ++    +A   A +VD+  + 
Sbjct: 420 GASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSA-LVDMYAKC 478

Query: 563 GQLEKALEFIKGLAVEPGPAVWGALLGACMIH 594
           G L+ + +    +  +     W  ++ A  +H
Sbjct: 479 GCLQMSRKVFDQIP-QKNVITWNVIIMAYGMH 509


>gi|224057914|ref|XP_002299387.1| predicted protein [Populus trichocarpa]
 gi|222846645|gb|EEE84192.1| predicted protein [Populus trichocarpa]
          Length = 814

 Score =  497 bits (1279), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 285/810 (35%), Positives = 449/810 (55%), Gaps = 45/810 (5%)

Query: 12  FLSLLKGAKTQSQL---TQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATC----YARALF 64
           F ++LK      +L    Q HA +   G+    S+VT + + L +    C     A  +F
Sbjct: 13  FPAVLKAVAGIQELYLGKQIHAHVFKFGY-GSFSSVT-IDNTLVNMYGKCGGLGDAYKVF 70

Query: 65  FSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDR 124
             I + D   +N II      E  + +I  +  L       P +FT   ++S A AC + 
Sbjct: 71  DRITERDQVSWNSIISALCRFEEWEVAIKAF-RLMLMEGFEPSSFT---LVSMALACSNL 126

Query: 125 S------IGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWN 178
                  +G  +HG     G+    F   AL+ +Y K   +  A+ +     ++D V WN
Sbjct: 127 RKRDGLWLGKQIHGCCFRKGHWR-TFSNNALMAMYAKLGRLDDAKSLLVLFEDRDLVTWN 185

Query: 179 SMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLK 238
           SMIS   +N  F +++     MV  G    D  + A+VLPA + +  LR G EI    L+
Sbjct: 186 SMISSFSQNERFMEALMFLRLMVLEG-VKPDGVTFASVLPACSHLDLLRTGKEIHAYALR 244

Query: 239 LG-FHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLR 297
                ++ +V + LV  Y  CG+VE   L+F  ++   +   NAMI+GY  +   E +L 
Sbjct: 245 TDDVIENSFVGSALVDMYCNCGQVESGRLVFDSVLDRKIGLWNAMIAGYAQSEHDEKALM 304

Query: 298 LFRQLLASAERV-NSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVY 356
           LF ++ A+A    N++T+  ++P +     +     IH + +K G+ +N  +  AL  +Y
Sbjct: 305 LFIEMEAAAGLYSNATTMSSIVPAYVRCEGISRKEGIHGYVIKRGLETNRYLQNALIDMY 364

Query: 357 SRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASK--------- 407
           SR+ +++ ++++FD   ++ + SWN +I  Y   G + +A+ L  EMQ  +         
Sbjct: 365 SRMGDIKTSKRIFDSMEDRDIVSWNTIITSYVICGRSSDALLLLHEMQRIEEKSTYDGDY 424

Query: 408 -------VAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKC 460
                    PN +T+ ++L  CA L A++ GK +H         S + V +AL+DMYAKC
Sbjct: 425 NDEKQVPFKPNSITLMTVLPGCASLSALAKGKEIHAYAIRNLLASQVTVGSALVDMYAKC 484

Query: 461 GNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSG-----IRPSGVT 515
           G +  AR +FD M  ++ +TWN +I  YG+HG G E+L+LF +M+  G     ++P+ VT
Sbjct: 485 GCLNLARRVFDQMPIRNVITWNVIIMAYGMHGKGKESLELFEDMVAEGAKGGEVKPTEVT 544

Query: 516 FLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGL 575
           F+++  +CSH+G+V EG  +F  M ++HG +P  +HYAC+VD++GRAG++E+A   +  +
Sbjct: 545 FIALFASCSHSGMVDEGLSLFHKMKNEHGIEPAPDHYACIVDLVGRAGKVEEAYGLVNTM 604

Query: 576 AVE-PGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQA 634
                    W +LLGAC I+ +  +  +A+E L +L P+   ++VLLSNIYS+   + +A
Sbjct: 605 PSGFDKVGAWSSLLGACRIYHNIEIGEIAAENLLQLQPDVASHYVLLSNIYSSAGLWDKA 664

Query: 635 ATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQ 694
             +R+ +K   + K PGC+ IE G   H F +GD  HPQS  ++  LE L+ ++++ G+ 
Sbjct: 665 MNLRRRMKAMGVKKEPGCSWIEYGDEVHKFLAGDLSHPQSEKLHDFLETLSERLKKEGYV 724

Query: 695 TETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFI 754
            +T   LHD++EEEKE ++  HSEKLAIAFG++ T PGT IR+ KNLRVC DCHTA+KFI
Sbjct: 725 PDTACVLHDIDEEEKETILCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHTASKFI 784

Query: 755 SKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           SK+  R I++RDA RFHHFK G CSCGDYW
Sbjct: 785 SKIEDREIILRDARRFHHFKDGTCSCGDYW 814



 Score =  206 bits (523), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 138/463 (29%), Positives = 235/463 (50%), Gaps = 23/463 (4%)

Query: 102 TALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYG--SDLFVGAALVDLYFKFSWV 159
           +  +PDNF +  VL A +   +  +G  +H H    GYG  S + +   LV++Y K   +
Sbjct: 4   SGFSPDNFAFPAVLKAVAGIQELYLGKQIHAHVFKFGYGSFSSVTIDNTLVNMYGKCGGL 63

Query: 160 KSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNG--GTWLDSTSVAAVL 217
             A KVFD++ E+D V WNS+IS L +   ++ +I  F  M+  G   +     S+A   
Sbjct: 64  GDAYKVFDRITERDQVSWNSIISALCRFEEWEVAIKAFRLMLMEGFEPSSFTLVSMALAC 123

Query: 218 PAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLI 277
             + +   L LG +I     + G H   +    L++ Y+K G ++ A+ L       DL+
Sbjct: 124 SNLRKRDGLWLGKQIHGCCFRKG-HWRTFSNNALMAMYAKLGRLDDAKSLLVLFEDRDLV 182

Query: 278 SCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFC 337
           + N+MIS ++ N +   +L   R ++    + +  T   ++P       L     IH++ 
Sbjct: 183 TWNSMISSFSQNERFMEALMFLRLMVLEGVKPDGVTFASVLPACSHLDLLRTGKEIHAYA 242

Query: 338 LKS-GIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEA 396
           L++  ++ NS V +AL  +Y    ++E+ R +FD   ++ +  WNAMIAGY Q+   E+A
Sbjct: 243 LRTDDVIENSFVGSALVDMYCNCGQVESGRLVFDSVLDRKIGLWNAMIAGYAQSEHDEKA 302

Query: 397 ISLFQEMQASK-VAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALID 455
           + LF EM+A+  +  N  T+SSI+ A  +   IS  + +H  V  R  E+N Y+  ALID
Sbjct: 303 LMLFIEMEAAAGLYSNATTMSSIVPAYVRCEGISRKEGIHGYVIKRGLETNRYLQNALID 362

Query: 456 MYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEM-------LHSG 508
           MY++ G+I  ++ +FD M  +  V+WNT+I+ Y + G   +AL L  EM        + G
Sbjct: 363 MYSRMGDIKTSKRIFDSMEDRDIVSWNTIITSYVICGRSSDALLLLHEMQRIEEKSTYDG 422

Query: 509 ---------IRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHD 542
                     +P+ +T ++VL  C+    + +G EI    I +
Sbjct: 423 DYNDEKQVPFKPNSITLMTVLPGCASLSALAKGKEIHAYAIRN 465


>gi|242090705|ref|XP_002441185.1| hypothetical protein SORBIDRAFT_09g021880 [Sorghum bicolor]
 gi|241946470|gb|EES19615.1| hypothetical protein SORBIDRAFT_09g021880 [Sorghum bicolor]
          Length = 878

 Score =  496 bits (1278), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 273/749 (36%), Positives = 429/749 (57%), Gaps = 8/749 (1%)

Query: 38  QNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTH 97
           + D+   T L      + +    R +F ++PK ++  +  ++ G+  +      +  +  
Sbjct: 136 RGDVGVGTSLVDMYMKWHSVVDGRKVFEAMPKRNVVTWTSLLTGYIQDGALSDVMELFFR 195

Query: 98  LRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFS 157
           +R    + P++ T++ VLS  ++     +G  +H  ++  G  S +FV  +L+++Y K  
Sbjct: 196 MRAE-GVWPNSVTFASVLSVVASQGMVDLGRRVHAQSVKFGCCSTVFVCNSLMNMYAKCG 254

Query: 158 WVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVL 217
            V+ AR VF  M  +D V WN++++GL+ N    +++ +F D  R+  T L  ++ A V+
Sbjct: 255 LVEEARVVFCGMETRDMVSWNTLMAGLVLNGHDLEALQLFHD-SRSSITMLTQSTYATVI 313

Query: 218 PAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIV-RPDL 276
              A +++L L  ++    LK GFH +  V+T L+  YSK G++  A  +F  +    ++
Sbjct: 314 KLCANIKQLGLARQLHSSVLKRGFHSYGNVMTALMDAYSKAGQLGNALDIFLLMSGSQNV 373

Query: 277 ISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSF 336
           +S  AMI+G   NG    +  LF ++       N  T   ++          L   IH+ 
Sbjct: 374 VSWTAMINGCIQNGDVPLAAALFSRMREDGVAPNDFTYSTILTASVA----SLPPQIHAQ 429

Query: 337 CLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEA 396
            +K+     S V TAL   YS+L   E A  +F    +K + SW+AM+  Y Q G ++ A
Sbjct: 430 VIKTNYECTSIVGTALLASYSKLCNTEEALSIFKMIDQKDVVSWSAMLTCYAQAGDSDGA 489

Query: 397 ISLFQEMQASKVAPNPVTVSSILSACAQLGA-ISLGKWVHELVKSRNFESNIYVSTALID 455
            ++F +M    + PN  T+SS++ ACA   A + LG+  H +         + VS+AL+ 
Sbjct: 490 TNIFIKMTMHGLKPNEFTISSVIDACASPTAGVDLGRQFHAISIKHRCHDALCVSSALVS 549

Query: 456 MYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVT 515
           MYA+ G+I  A+ +F+  + +  V+WN+M+SGY  HG+  +AL +F +M   GI   GVT
Sbjct: 550 MYARKGSIESAQCIFERQTDRDLVSWNSMLSGYAQHGYSQKALDVFRQMEAEGIEMDGVT 609

Query: 516 FLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGL 575
           FLSV+  C+HAGLV EG   F SM  D+G  P  EHYACMVD+  RAG+L++A+  I+G+
Sbjct: 610 FLSVIMGCAHAGLVEEGQRYFDSMARDYGITPTMEHYACMVDLYSRAGKLDEAMSLIEGM 669

Query: 576 AVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAA 635
           +   GP VW  LLGAC +HK+  L ++A+EKL  L+P +   +VLLSNIYSA   + +  
Sbjct: 670 SFPAGPMVWRTLLGACKVHKNVELGKLAAEKLLSLEPFDSATYVLLSNIYSAAGKWKEKD 729

Query: 636 TVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQT 695
            VR+++  +K+ K  GC+ I++    H F + D+ HP S  IYA L  +  K+++ G+  
Sbjct: 730 EVRKLMDTKKVKKEAGCSWIQIKNKVHSFIASDKSHPLSEQIYAKLRAMTTKLKQEGYCP 789

Query: 696 ETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFIS 755
           +T  ALH+V EE+KE M+ +HSE+LA+AFGLIAT PG  + I KNLRVC DCHT  K +S
Sbjct: 790 DTSFALHEVAEEQKEAMLAMHSERLALAFGLIATPPGAPLHIFKNLRVCGDCHTVIKMVS 849

Query: 756 KVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           K+  R IV+RD +RFHHF  GVCSCGD+W
Sbjct: 850 KIEDREIVMRDCSRFHHFNSGVCSCGDFW 878


>gi|168017714|ref|XP_001761392.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162687398|gb|EDQ73781.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 833

 Score =  496 bits (1277), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 275/758 (36%), Positives = 414/758 (54%), Gaps = 2/758 (0%)

Query: 27  QTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNE 86
           Q    II  G Q ++  +  L    S       AR +F S+    +  +N +I G++   
Sbjct: 78  QVRDHIIQGGRQLNIYELNTLIKLYSICGNVTEARQIFDSVENKTVVTWNALIAGYAQVG 137

Query: 87  MPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVG 146
             K +   +  +  +  L P   T+  VL A S+    + G  +H   + +G+ SD  +G
Sbjct: 138 HVKEAFALFRQM-VDEGLEPSIITFLSVLDACSSPAGLNWGKEVHAQVVTAGFVSDFRIG 196

Query: 147 AALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGT 206
            ALV +Y K   +  AR+VFD +  +D   +N M+ G  K+  ++ +  +F  M +  G 
Sbjct: 197 TALVSMYVKGGSMDDARQVFDGLHIRDVSTFNVMVGGYAKSGDWEKAFELFYRM-QQVGL 255

Query: 207 WLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAEL 266
             +  S  ++L      + L  G  +    +  G  D + V T L+  Y+ CG +E A  
Sbjct: 256 KPNKISFLSILDGCWTPEALAWGKAVHAQCMNAGLVDDIRVATSLIRMYTTCGSIEGARR 315

Query: 267 LFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGH 326
           +F ++   D++S   MI GY  NG  E +  LF  +     + +  T + ++       +
Sbjct: 316 VFDNMKVRDVVSWTVMIEGYAENGNIEDAFGLFATMQEEGIQPDRITYMHIMNACAISAN 375

Query: 327 LHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAG 386
           L+    IHS    +G  ++  V TAL  +Y++   ++ AR++FD    + + SW+AMI  
Sbjct: 376 LNHAREIHSQVDIAGFGTDLLVSTALVHMYAKCGAIKDARQVFDAMPRRDVVSWSAMIGA 435

Query: 387 YTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESN 446
           Y +NG   EA   F  M+ S + P+ VT  ++L+AC  LGA+ +G  ++      +  S+
Sbjct: 436 YVENGYGTEAFETFHLMKRSNIEPDGVTYINLLNACGHLGALDVGMEIYTQAIKADLVSH 495

Query: 447 IYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLH 506
           + +  ALI M AK G++  AR +FD M  +  +TWN MI GY LHG+  EAL LF  ML 
Sbjct: 496 VPLGNALIIMNAKHGSVERARYIFDTMVRRDVITWNAMIGGYSLHGNAREALYLFDRMLK 555

Query: 507 SGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLE 566
              RP+ VTF+ VL ACS AG V EG   F  ++   G  P  + Y CMVD+LGRAG+L+
Sbjct: 556 ERFRPNSVTFVGVLSACSRAGFVDEGRRFFTYLLEGRGIVPTVKLYGCMVDLLGRAGELD 615

Query: 567 KALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYS 626
           +A   IK + V+P  ++W +LL AC IH + ++A  A+E+   +DP +   +V LS++Y+
Sbjct: 616 EAELLIKSMPVKPTSSIWSSLLVACRIHGNLDVAERAAERCLMIDPYDGAVYVQLSHMYA 675

Query: 627 AERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNG 686
           A   +   A VR+V++ R + K  GCT IEV G  H F   D+ HP    IYA L +L  
Sbjct: 676 AAGMWENVAKVRKVMESRGIRKEQGCTWIEVAGKVHTFVVEDRSHPLVGEIYAELARLMN 735

Query: 687 KMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLD 746
            ++  G+   T   LHDV E++KE  +  HSEKLAIA+G+++   GT IRI KNLRVC D
Sbjct: 736 AIKREGYIPITQNVLHDVGEQQKEEAISYHSEKLAIAYGVLSLPSGTPIRIYKNLRVCSD 795

Query: 747 CHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           CH+A+KFISKVTGR I+ RDA+RFHHFK GVCSCGDYW
Sbjct: 796 CHSASKFISKVTGREIIARDASRFHHFKDGVCSCGDYW 833



 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 150/522 (28%), Positives = 258/522 (49%), Gaps = 13/522 (2%)

Query: 107 DNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVF 166
           D+ TY  +    +   D ++G  +  H I  G   +++    L+ LY     V  AR++F
Sbjct: 56  DSRTYVKLFQRCTELRDAALGKQVRDHIIQGGRQLNIYELNTLIKLYSICGNVTEARQIF 115

Query: 167 DKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVA--AVLPAVAEVQ 224
           D +  K  V WN++I+G  +    +++  +F  MV  G   L+ + +   +VL A +   
Sbjct: 116 DSVENKTVVTWNALIAGYAQVGHVKEAFALFRQMVDEG---LEPSIITFLSVLDACSSPA 172

Query: 225 ELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMIS 284
            L  G E+    +  GF     + T LVS Y K G ++ A  +F  +   D+ + N M+ 
Sbjct: 173 GLNWGKEVHAQVVTAGFVSDFRIGTALVSMYVKGGSMDDARQVFDGLHIRDVSTFNVMVG 232

Query: 285 GYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVS 344
           GY  +G  E +  LF ++     + N  + + ++   +    L     +H+ C+ +G+V 
Sbjct: 233 GYAKSGDWEKAFELFYRMQQVGLKPNKISFLSILDGCWTPEALAWGKAVHAQCMNAGLVD 292

Query: 345 NSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQ 404
           +  V T+L  +Y+    +E AR++FD    + + SW  MI GY +NG  E+A  LF  MQ
Sbjct: 293 DIRVATSLIRMYTTCGSIEGARRVFDNMKVRDVVSWTVMIEGYAENGNIEDAFGLFATMQ 352

Query: 405 ASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIV 464
              + P+ +T   I++ACA    ++  + +H  V    F +++ VSTAL+ MYAKCG I 
Sbjct: 353 EEGIQPDRITYMHIMNACAISANLNHAREIHSQVDIAGFGTDLLVSTALVHMYAKCGAIK 412

Query: 465 EARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACS 524
           +AR++FD M  +  V+W+ MI  Y  +G+G EA + F  M  S I P GVT++++L AC 
Sbjct: 413 DARQVFDAMPRRDVVSWSAMIGAYVENGYGTEAFETFHLMKRSNIEPDGVTYINLLNACG 472

Query: 525 HAGLVREGDEIFQSMIHDH--GFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPA 582
           H G +  G EI+   I        PL      ++ +  + G +E+A  +I    V     
Sbjct: 473 HLGALDVGMEIYTQAIKADLVSHVPLGN---ALIIMNAKHGSVERA-RYIFDTMVRRDVI 528

Query: 583 VWGALLGACMIHKDTNLARVASEKLFE--LDPENVGYHVLLS 622
            W A++G   +H +   A    +++ +    P +V +  +LS
Sbjct: 529 TWNAMIGGYSLHGNAREALYLFDRMLKERFRPNSVTFVGVLS 570



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 109/387 (28%), Positives = 196/387 (50%), Gaps = 2/387 (0%)

Query: 204 GGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVER 263
           GG  +DS +   +     E+++  LG +++   ++ G   ++Y L  L+  YS CG V  
Sbjct: 51  GGNHIDSRTYVKLFQRCTELRDAALGKQVRDHIIQGGRQLNIYELNTLIKLYSICGNVTE 110

Query: 264 AELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYP 323
           A  +F  +    +++ NA+I+GY   G  + +  LFRQ++      +  T + ++     
Sbjct: 111 ARQIFDSVENKTVVTWNALIAGYAQVGHVKEAFALFRQMVDEGLEPSIITFLSVLDACSS 170

Query: 324 FGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAM 383
              L+    +H+  + +G VS+  + TAL ++Y +   M+ AR++FD    + ++++N M
Sbjct: 171 PAGLNWGKEVHAQVVTAGFVSDFRIGTALVSMYVKGGSMDDARQVFDGLHIRDVSTFNVM 230

Query: 384 IAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNF 443
           + GY ++G  E+A  LF  MQ   + PN ++  SIL  C    A++ GK VH    +   
Sbjct: 231 VGGYAKSGDWEKAFELFYRMQQVGLKPNKISFLSILDGCWTPEALAWGKAVHAQCMNAGL 290

Query: 444 ESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSE 503
             +I V+T+LI MY  CG+I  AR +FD M  +  V+W  MI GY  +G+  +A  LF+ 
Sbjct: 291 VDDIRVATSLIRMYTTCGSIEGARRVFDNMKVRDVVSWTVMIEGYAENGNIEDAFGLFAT 350

Query: 504 MLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAG 563
           M   GI+P  +T++ ++ AC+ +  +    EI  S +   GF         +V +  + G
Sbjct: 351 MQEEGIQPDRITYMHIMNACAISANLNHAREI-HSQVDIAGFGTDLLVSTALVHMYAKCG 409

Query: 564 QLEKALEFIKGLAVEPGPAVWGALLGA 590
            ++ A +    +        W A++GA
Sbjct: 410 AIKDARQVFDAMP-RRDVVSWSAMIGA 435


>gi|302793246|ref|XP_002978388.1| hypothetical protein SELMODRAFT_108652 [Selaginella moellendorffii]
 gi|300153737|gb|EFJ20374.1| hypothetical protein SELMODRAFT_108652 [Selaginella moellendorffii]
          Length = 687

 Score =  496 bits (1277), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 258/660 (39%), Positives = 387/660 (58%), Gaps = 3/660 (0%)

Query: 127 GVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMK 186
           G  +H     S +  D+FV  ALV+ Y K   +  ARKVFD MP +    WNSMIS    
Sbjct: 29  GKFIHSCVRESEHSLDVFVNTALVNTYTKCGSLTDARKVFDGMPCRSVGTWNSMISAYSI 88

Query: 187 NCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVY 246
           +    ++ ++F  M ++ G   D  +  ++L A    + L+ G  ++    +  F   ++
Sbjct: 89  SERSGEAFFIFQRM-QHEGERCDRVTFLSILDACVNPENLQHGKHVRESISETSFELDLF 147

Query: 247 VLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASA 306
           V T L++ Y++C   E A  +F  + + +LI+ +A+I+ +  +G    +LR FR +    
Sbjct: 148 VGTALITMYARCRSPENAAQVFGRMKQKNLITWSAIITAFADHGHCGEALRYFRMMQQEG 207

Query: 307 ERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLN--EMEA 364
              N  T + L+  F     L   + IH    + G+   +++  AL  VY R    E++ 
Sbjct: 208 ILPNRVTFISLLNGFTTPSGLEELSRIHLLITEHGLDDTTTMSNALVNVYGRCETGELDV 267

Query: 365 ARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQ 424
           A  +  E  E+ + +WN +I GYT +G + EA+  +Q +Q   +  + VT  S+L+AC  
Sbjct: 268 AEVILQEMDEQQITAWNVLINGYTLHGRSREALETYQRLQLEAIPVDKVTFISVLNACTS 327

Query: 425 LGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTM 484
             +++ GK +H        +S++ V  AL +MY+KCG++  AR +FD M  +S V+WN M
Sbjct: 328 STSLAEGKMIHSNAVECGLDSDVIVKNALTNMYSKCGSMENARRIFDSMPIRSAVSWNGM 387

Query: 485 ISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHG 544
           +  Y  HG   E L+L  +M   G++ +G+TF+SVL +CSHAGL+ EG + F S+ HD G
Sbjct: 388 LQAYAQHGESEEVLKLIRKMEQEGVKLNGITFVSVLSSCSHAGLIAEGCQYFHSLGHDRG 447

Query: 545 FKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVAS 604
            +   EHY C+VD+LGRAG+L++A ++I  +  EP    W +LLGAC +HKD +  ++A+
Sbjct: 448 IEVKTEHYGCLVDLLGRAGKLQEAEKYISKMPSEPEIVTWASLLGACRVHKDLDRGKLAA 507

Query: 605 EKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVF 664
            KL ELDP N    V+LSNIYS   D+  AA +R+ +  R++ K PG + I+V    H F
Sbjct: 508 RKLLELDPGNSSASVVLSNIYSERGDWKNAAKLRRAMASRRVKKVPGISSIQVKNKVHEF 567

Query: 665 TSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAF 724
              D  HP++  IY  +E+L   MREAG+  +T   LHDV+EE+KE ++  HSEKLAIAF
Sbjct: 568 RVRDTSHPRAAEIYDKVEELCFAMREAGYVPDTKMVLHDVDEEQKESLLAYHSEKLAIAF 627

Query: 725 GLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           GLI+T   + + I KNLRVC DCHTATKFISK+TGR IVVRD +RFHHF+ G CSC DYW
Sbjct: 628 GLISTPEKSSLHIFKNLRVCEDCHTATKFISKITGREIVVRDNHRFHHFRDGSCSCKDYW 687



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 47/132 (35%), Positives = 78/132 (59%)

Query: 408 VAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEAR 467
           V  N +T  ++L++     A+  GK++H  V+      +++V+TAL++ Y KCG++ +AR
Sbjct: 6   VKANVITFLNVLNSVVDPDALRKGKFIHSCVRESEHSLDVFVNTALVNTYTKCGSLTDAR 65

Query: 468 ELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAG 527
           ++FD M  +S  TWN+MIS Y +     EA  +F  M H G R   VTFLS+L AC +  
Sbjct: 66  KVFDGMPCRSVGTWNSMISAYSISERSGEAFFIFQRMQHEGERCDRVTFLSILDACVNPE 125

Query: 528 LVREGDEIFQSM 539
            ++ G  + +S+
Sbjct: 126 NLQHGKHVRESI 137



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 75/329 (22%), Positives = 149/329 (45%), Gaps = 18/329 (5%)

Query: 8   SRNLFLSLLKGAKTQS---QLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATC------ 58
           +R  F+SLL G  T S   +L++ H  I  HG    L   T +++ L +    C      
Sbjct: 211 NRVTFISLLNGFTTPSGLEELSRIHLLITEHG----LDDTTTMSNALVNVYGRCETGELD 266

Query: 59  YARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAA 118
            A  +   + +  +  +NV+I G++ +   + ++  Y  L+   A+  D  T+  VL+A 
Sbjct: 267 VAEVILQEMDEQQITAWNVLINGYTLHGRSREALETYQRLQLE-AIPVDKVTFISVLNAC 325

Query: 119 SACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWN 178
           ++    + G ++H +A+  G  SD+ V  AL ++Y K   +++AR++FD MP +  V WN
Sbjct: 326 TSSTSLAEGKMIHSNAVECGLDSDVIVKNALTNMYSKCGSMENARRIFDSMPIRSAVSWN 385

Query: 179 SMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGME-IQCLGL 237
            M+    ++   ++ + +   M +  G  L+  +  +VL + +    +  G +    LG 
Sbjct: 386 GMLQAYAQHGESEEVLKLIRKMEQE-GVKLNGITFVSVLSSCSHAGLIAEGCQYFHSLGH 444

Query: 238 KLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDI-VRPDLISCNAMISGYTCNGKTESSL 296
             G          LV    + G+++ AE     +   P++++  +++     +   +   
Sbjct: 445 DRGIEVKTEHYGCLVDLLGRAGKLQEAEKYISKMPSEPEIVTWASLLGACRVHKDLDRGK 504

Query: 297 RLFRQLLASAERVNSSTIVGLIPVFYPFG 325
              R+LL   +  NSS  V L  ++   G
Sbjct: 505 LAARKLL-ELDPGNSSASVVLSNIYSERG 532


>gi|334185836|ref|NP_001190038.1| tetratricopeptide repeat-like family protein [Arabidopsis thaliana]
 gi|218546754|sp|P0C899.1|PP271_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g49142
 gi|332644983|gb|AEE78504.1| tetratricopeptide repeat-like family protein [Arabidopsis thaliana]
          Length = 686

 Score =  496 bits (1277), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 257/660 (38%), Positives = 385/660 (58%), Gaps = 39/660 (5%)

Query: 130 LHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCC 189
           +H   I+     +  +G  L+  Y     V SARKVFD++PE++ ++ N MI   + N  
Sbjct: 61  VHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGF 120

Query: 190 FQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLT 249
           + + + VFG M        D  +   VL A +    + +G +I     K+G    ++V  
Sbjct: 121 YGEGVKVFGTMC-GCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGN 179

Query: 250 GLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERV 309
           GLVS Y KCG +  A L+  ++ R D++S N+++ GY  N + + +L + R++ +     
Sbjct: 180 GLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISH 239

Query: 310 NSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLF 369
           ++ T+  L+P                       VSN+   T  + +Y         + +F
Sbjct: 240 DAGTMASLLPA----------------------VSNT---TTENVMY--------VKDMF 266

Query: 370 DESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAIS 429
            +  +KSL SWN MI  Y +N +  EA+ L+  M+A    P+ V+++S+L AC    A+S
Sbjct: 267 FKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALS 326

Query: 430 LGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYG 489
           LGK +H  ++ +    N+ +  ALIDMYAKCG + +AR++F+ M  +  V+W  MIS YG
Sbjct: 327 LGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYG 386

Query: 490 LHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLA 549
             G G +A+ LFS++  SG+ P  + F++ L ACSHAGL+ EG   F+ M   +   P  
Sbjct: 387 FSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRL 446

Query: 550 EHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFE 609
           EH ACMVD+LGRAG++++A  FI+ +++EP   VWGALLGAC +H DT++  +A++KLF+
Sbjct: 447 EHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQ 506

Query: 610 LDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQ 669
           L PE  GY+VLLSNIY+    + +   +R ++K + L K PG + +EV    H F  GD+
Sbjct: 507 LAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDR 566

Query: 670 LHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIAT 729
            HPQS  IY  L+ L  KM+E G+  ++ +ALHDVEEE+KE  + VHSEKLAI F L+ T
Sbjct: 567 SHPQSDEIYRELDVLVKKMKELGYVPDSESALHDVEEEDKETHLAVHSEKLAIVFALMNT 626

Query: 730 EPGTE-----IRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           +   E     IRI KNLR+C DCH A K IS++T R I++RD NRFH F+ GVCSCGDYW
Sbjct: 627 KEEEEDSNNTIRITKNLRICGDCHVAAKLISQITSREIIIRDTNRFHVFRFGVCSCGDYW 686



 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 79/282 (28%), Positives = 129/282 (45%), Gaps = 6/282 (2%)

Query: 313 TIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDES 372
           T+  L  V   +  +     +HS  +   +  NSS+   L   Y+ L ++ +ARK+FDE 
Sbjct: 41  TVFLLGQVLDTYPDIRTLRTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEI 100

Query: 373 SEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGK 432
            E+++   N MI  Y  NG   E + +F  M    V P+  T   +L AC+  G I +G+
Sbjct: 101 PERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGR 160

Query: 433 WVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHG 492
            +H         S ++V   L+ MY KCG + EAR + D MS +  V+WN+++ GY  + 
Sbjct: 161 KIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQ 220

Query: 493 HGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHY 552
              +AL++  EM    I     T  S+L A S+     E     + M    G K L   +
Sbjct: 221 RFDDALEVCREMESVKISHDAGTMASLLPAVSNT--TTENVMYVKDMFFKMGKKSLVS-W 277

Query: 553 ACMVDILGRAGQLEKALEF---IKGLAVEPGPAVWGALLGAC 591
             M+ +  +     +A+E    ++    EP      ++L AC
Sbjct: 278 NVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPAC 319


>gi|356561464|ref|XP_003549001.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g49142-like [Glycine max]
          Length = 673

 Score =  496 bits (1276), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 240/623 (38%), Positives = 378/623 (60%), Gaps = 35/623 (5%)

Query: 162 ARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVA 221
           AR VFD +PE++ + +N MI   M N  + D++ VF DMV +GG   D  +   VL A +
Sbjct: 86  ARNVFDVIPERNVIFYNVMIRSYMNNHLYDDALLVFRDMV-SGGFSPDHYTYPCVLKACS 144

Query: 222 EVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNA 281
               LR+G+++     K+G   +++V  GL++ Y KCG +  A  +  ++   D++S N+
Sbjct: 145 CSDNLRIGLQLHGAVFKVGLDLNLFVGNGLIALYGKCGCLPEARCVLDEMQSKDVVSWNS 204

Query: 282 MISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSG 341
           M++GY  N + + +L + R++    ++ ++ T+  L+P                      
Sbjct: 205 MVAGYAQNMQFDDALDICREMDGVRQKPDACTMASLLPA--------------------- 243

Query: 342 IVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQ 401
            V+N+S    L              ++F    +KSL SWN MI+ Y +N +  +++ L+ 
Sbjct: 244 -VTNTSSENVLYV-----------EEMFMNLEKKSLVSWNVMISVYMKNSMPGKSVDLYL 291

Query: 402 EMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCG 461
           +M   +V P+ +T +S+L AC  L A+ LG+ +HE V+ +    N+ +  +LIDMYA+CG
Sbjct: 292 QMGKCEVEPDAITCASVLRACGDLSALLLGRRIHEYVERKKLCPNMLLENSLIDMYARCG 351

Query: 462 NIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLY 521
            + +A+ +FD M  +   +W ++IS YG+ G G  A+ LF+EM +SG  P  + F+++L 
Sbjct: 352 CLEDAKRVFDRMKFRDVASWTSLISAYGMTGQGYNAVALFTEMQNSGQSPDSIAFVAILS 411

Query: 522 ACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGP 581
           ACSH+GL+ EG   F+ M  D+   P+ EH+AC+VD+LGR+G++++A   IK + ++P  
Sbjct: 412 ACSHSGLLNEGKFYFKQMTDDYKITPIIEHFACLVDLLGRSGRVDEAYNIIKQMPMKPNE 471

Query: 582 AVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVV 641
            VWGALL +C ++ + ++  +A++KL +L PE  GY+VLLSNIY+    + +   +R ++
Sbjct: 472 RVWGALLSSCRVYSNMDIGILAADKLLQLAPEESGYYVLLSNIYAKAGRWTEVTAIRSLM 531

Query: 642 KKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTAL 701
           K+R++ K PG + +E+    H F +GD  HPQS  IY  L  L GKM+E G+  +T +AL
Sbjct: 532 KRRRIRKMPGISNVELNNQVHTFLAGDTYHPQSKEIYEELSVLVGKMKELGYVPKTDSAL 591

Query: 702 HDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRV 761
           HDVEEE+KE  + VHSEKLAI F ++ T+  + IRI KNLRVC DCH A K ISK+  R 
Sbjct: 592 HDVEEEDKECHLAVHSEKLAIVFAILNTQE-SPIRITKNLRVCGDCHIAAKLISKIVQRE 650

Query: 762 IVVRDANRFHHFKGGVCSCGDYW 784
           IV+RD NRFHHFK G+CSCGDYW
Sbjct: 651 IVIRDTNRFHHFKDGICSCGDYW 673



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 140/530 (26%), Positives = 239/530 (45%), Gaps = 46/530 (8%)

Query: 2   SMKTPQSRNLFLSLLKGAKTQ----SQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKAT 57
           S+ +PQ+  L L LL     Q      L   H+++    F  + S   KL    +     
Sbjct: 24  SLVSPQNPVLVLELLGKVLDQYPDIKTLKNVHSKVFNLSFHENPSLGIKLMRAYAARGEP 83

Query: 58  CYARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSA 117
             AR +F  IP+ ++  +NV+IR + NN +   ++  +  +  +   +PD++TY  VL A
Sbjct: 84  GLARNVFDVIPERNVIFYNVMIRSYMNNHLYDDALLVFRDM-VSGGFSPDHYTYPCVLKA 142

Query: 118 ASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLW 177
            S   +  IG+ LHG     G   +LFVG  L+ LY K   +  AR V D+M  KD V W
Sbjct: 143 CSCSDNLRIGLQLHGAVFKVGLDLNLFVGNGLIALYGKCGCLPEARCVLDEMQSKDVVSW 202

Query: 178 NSMISGLMKNCCFQDSIWVFGDM--VRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCL 235
           NSM++G  +N  F D++ +  +M  VR      D+ ++A++LPAV               
Sbjct: 203 NSMVAGYAQNMQFDDALDICREMDGVRQKP---DACTMASLLPAVTNTSS---------- 249

Query: 236 GLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESS 295
                  + +YV                 E +F ++ +  L+S N MIS Y  N     S
Sbjct: 250 ------ENVLYV-----------------EEMFMNLEKKSLVSWNVMISVYMKNSMPGKS 286

Query: 296 LRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTV 355
           + L+ Q+       ++ T   ++        L L   IH +  +  +  N  +  +L  +
Sbjct: 287 VDLYLQMGKCEVEPDAITCASVLRACGDLSALLLGRRIHEYVERKKLCPNMLLENSLIDM 346

Query: 356 YSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTV 415
           Y+R   +E A+++FD    + +ASW ++I+ Y   G    A++LF EMQ S  +P+ +  
Sbjct: 347 YARCGCLEDAKRVFDRMKFRDVASWTSLISAYGMTGQGYNAVALFTEMQNSGQSPDSIAF 406

Query: 416 SSILSACAQLGAISLGK-WVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMS 474
            +ILSAC+  G ++ GK +  ++         I     L+D+  + G + EA  +   M 
Sbjct: 407 VAILSACSHSGLLNEGKFYFKQMTDDYKITPIIEHFACLVDLLGRSGRVDEAYNIIKQMP 466

Query: 475 HK-SEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSG-VTFLSVLYA 522
            K +E  W  ++S   ++ +    +    ++L      SG    LS +YA
Sbjct: 467 MKPNERVWGALLSSCRVYSNMDIGILAADKLLQLAPEESGYYVLLSNIYA 516



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 58/193 (30%), Positives = 97/193 (50%)

Query: 333 IHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGL 392
           +HS         N S+   L   Y+   E   AR +FD   E+++  +N MI  Y  N L
Sbjct: 54  VHSKVFNLSFHENPSLGIKLMRAYAARGEPGLARNVFDVIPERNVIFYNVMIRSYMNNHL 113

Query: 393 TEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTA 452
            ++A+ +F++M +   +P+  T   +L AC+    + +G  +H  V     + N++V   
Sbjct: 114 YDDALLVFRDMVSGGFSPDHYTYPCVLKACSCSDNLRIGLQLHGAVFKVGLDLNLFVGNG 173

Query: 453 LIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPS 512
           LI +Y KCG + EAR + D M  K  V+WN+M++GY  +    +AL +  EM     +P 
Sbjct: 174 LIALYGKCGCLPEARCVLDEMQSKDVVSWNSMVAGYAQNMQFDDALDICREMDGVRQKPD 233

Query: 513 GVTFLSVLYACSH 525
             T  S+L A ++
Sbjct: 234 ACTMASLLPAVTN 246


>gi|255545098|ref|XP_002513610.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223547518|gb|EEF49013.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 660

 Score =  496 bits (1276), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 256/656 (39%), Positives = 398/656 (60%), Gaps = 36/656 (5%)

Query: 130 LHGHAIVSGYGS-DLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNC 188
           LHG  +   Y   +  VG  L+ +Y        AR +FD++ +K+ V +N MI   + N 
Sbjct: 40  LHGKVLNDQYLRWNPSVGIKLMRVYAACGEPGLARHIFDEITDKNVVFFNVMIRSYVNNH 99

Query: 189 CFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVL 248
            ++D++ V+  M   G    D  +   VL A +    L +G++I    LK+G   ++YV 
Sbjct: 100 LYKDALLVYKTMYTQGFV-PDMYTYPCVLKASSRSDSLWVGLQIHGAVLKIGLDLNLYVG 158

Query: 249 TGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAER 308
            GL++ Y KC  ++ A+ +  +I   D++S N+M+S Y  NG+   +L L R++ A   +
Sbjct: 159 NGLIAMYGKCKSLKEAQQVLDEIPCRDVVSWNSMVSVYAQNGRFNDALELCREMEALNLK 218

Query: 309 VNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKL 368
            N  T+  L+P                       V+N+   T+ + +Y         +++
Sbjct: 219 PNDCTMASLLPA----------------------VTNT---TSDNVLY--------VKEM 245

Query: 369 FDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAI 428
           F + ++KS+ SWN MIA Y  N + +EA+ L+ +M+A+ V P+ V++ S+L A   L A+
Sbjct: 246 FLKLTKKSVISWNVMIAMYVNNSMPKEAVVLYSQMEANGVEPDVVSIVSVLPAYGDLSAL 305

Query: 429 SLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGY 488
           SLG+ VH+  + +    N+ +  ALIDMYAKCG + +AR +F+ M  +  V+W ++IS Y
Sbjct: 306 SLGRRVHKFAERKKLLPNLLLENALIDMYAKCGCLRDARAVFNQMQFRDVVSWTSIISAY 365

Query: 489 GLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPL 548
           G  G G +A+ +F+EM +SG+ P  + F+SVL ACSHAGL+ +G   F +++ + G  P 
Sbjct: 366 GKCGQGRDAVAVFAEMRNSGLNPDSIAFVSVLAACSHAGLLDDGRYYF-NLMAECGITPK 424

Query: 549 AEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLF 608
            EH+AC+VD+LGRAG++++A  FI+ + +EP   VWG LL AC ++ + N+  +A++KL 
Sbjct: 425 LEHFACVVDLLGRAGKIDEAYGFIRQMPLEPDERVWGPLLSACRVYSNMNIGILAADKLL 484

Query: 609 ELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGD 668
            L+PE+ GY+VLLSNIY+    +   A +R +++++ + K PG + +E+    H F +GD
Sbjct: 485 MLNPEHSGYYVLLSNIYAKAGRWADVAAIRSIMERKGIKKLPGISNVELNDGVHTFLAGD 544

Query: 669 QLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIA 728
             HPQS  IY  L+ L GKM+E G+  ET +ALHDVEEE+KE  + VHSEKLA+AF +I 
Sbjct: 545 HSHPQSKKIYEELDVLVGKMKELGYMPETDSALHDVEEEDKEYHLAVHSEKLAVAFAIIN 604

Query: 729 TEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           T+PGT IR+ KNLRVC DCH A K ISK+  R I++RD +RFHHF+ G CSCGDYW
Sbjct: 605 TKPGTPIRVTKNLRVCGDCHVAAKLISKIAEREIIIRDTHRFHHFQEGCCSCGDYW 660



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 110/429 (25%), Positives = 201/429 (46%), Gaps = 36/429 (8%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           AR +F  I   ++  FNV+IR + NN + K ++  Y  +       PD +TY  VL A+S
Sbjct: 73  ARHIFDEITDKNVVFFNVMIRSYVNNHLYKDALLVYKTMY-TQGFVPDMYTYPCVLKASS 131

Query: 120 ACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNS 179
                 +G+ +HG  +  G   +L+VG  L+ +Y K   +K A++V D++P +D V WNS
Sbjct: 132 RSDSLWVGLQIHGAVLKIGLDLNLYVGNGLIAMYGKCKSLKEAQQVLDEIPCRDVVSWNS 191

Query: 180 MISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKL 239
           M+S   +N  F D++ +  +M        D T +A++LPAV                   
Sbjct: 192 MVSVYAQNGRFNDALELCREMEALNLKPNDCT-MASLLPAVTNTTS-------------- 236

Query: 240 GFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLF 299
              D+V         Y K         +F  + +  +IS N MI+ Y  N   + ++ L+
Sbjct: 237 ---DNV--------LYVK--------EMFLKLTKKSVISWNVMIAMYVNNSMPKEAVVLY 277

Query: 300 RQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRL 359
            Q+ A+    +  +IV ++P +     L L   +H F  +  ++ N  +  AL  +Y++ 
Sbjct: 278 SQMEANGVEPDVVSIVSVLPAYGDLSALSLGRRVHKFAERKKLLPNLLLENALIDMYAKC 337

Query: 360 NEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSIL 419
             +  AR +F++   + + SW ++I+ Y + G   +A+++F EM+ S + P+ +   S+L
Sbjct: 338 GCLRDARAVFNQMQFRDVVSWTSIISAYGKCGQGRDAVAVFAEMRNSGLNPDSIAFVSVL 397

Query: 420 SACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMS-HKSE 478
           +AC+  G +  G++   L+        +     ++D+  + G I EA      M     E
Sbjct: 398 AACSHAGLLDDGRYYFNLMAECGITPKLEHFACVVDLLGRAGKIDEAYGFIRQMPLEPDE 457

Query: 479 VTWNTMISG 487
             W  ++S 
Sbjct: 458 RVWGPLLSA 466



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 62/218 (28%), Positives = 103/218 (47%), Gaps = 3/218 (1%)

Query: 59  YARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAA 118
           Y + +F  + K  +  +NV+I  + NN MPK ++  Y+ +  N  + PD  +   VL A 
Sbjct: 241 YVKEMFLKLTKKSVISWNVMIAMYVNNSMPKEAVVLYSQMEAN-GVEPDVVSIVSVLPAY 299

Query: 119 SACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWN 178
                 S+G  +H  A       +L +  AL+D+Y K   ++ AR VF++M  +D V W 
Sbjct: 300 GDLSALSLGRRVHKFAERKKLLPNLLLENALIDMYAKCGCLRDARAVFNQMQFRDVVSWT 359

Query: 179 SMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLK 238
           S+IS   K    +D++ VF +M RN G   DS +  +VL A +    L  G     L  +
Sbjct: 360 SIISAYGKCGQGRDAVAVFAEM-RNSGLNPDSIAFVSVLAACSHAGLLDDGRYYFNLMAE 418

Query: 239 LGFHDHVYVLTGLVSFYSKCGEVERAELLFRDI-VRPD 275
            G    +     +V    + G+++ A    R + + PD
Sbjct: 419 CGITPKLEHFACVVDLLGRAGKIDEAYGFIRQMPLEPD 456


>gi|357504267|ref|XP_003622422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355497437|gb|AES78640.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 952

 Score =  495 bits (1274), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 278/814 (34%), Positives = 445/814 (54%), Gaps = 50/814 (6%)

Query: 14  SLLKGAKTQSQLT---QTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCY----ARALFFS 66
           S+L G      L    + H  ++ HG   D+   +       +F A C     A+ +F  
Sbjct: 146 SILPGCSDLQDLKSGKEIHGFVVRHGMVEDVFVSSAFV----NFYAKCLCVREAQTVFDL 201

Query: 67  IPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSI 126
           +P  D+  +N +   + N   P+  +  +  +  +  + PD  T S +LSA S   D   
Sbjct: 202 MPHRDVVTWNSLSSCYVNCGFPQKGLNVFREMVLD-GVKPDPVTVSCILSACSDLQDLKS 260

Query: 127 GVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMK 186
           G  +HG A+  G   ++FV  ALV+LY     V+ A+ VFD MP ++ + WNS+ S  + 
Sbjct: 261 GKAIHGFALKHGMVENVFVSNALVNLYESCLCVREAQAVFDLMPHRNVITWNSLASCYV- 319

Query: 187 NCCF-QDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHV 245
           NC F Q  + VF +M  NG    D  +++++LPA +++++L+ G  I    +K G  + V
Sbjct: 320 NCGFPQKGLNVFREMGLNG-VKPDPMAMSSILPACSQLKDLKSGKTIHGFAVKHGMVEDV 378

Query: 246 YVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLAS 305
           +V T LV+ Y+ C  V  A+ +F  +   ++++ N++ S Y   G  +  L +FR+++ +
Sbjct: 379 FVCTALVNLYANCLCVREAQTVFDLMPHRNVVTWNSLSSCYVNCGFPQKGLNVFREMVLN 438

Query: 306 AERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAA 365
             + +  T++ ++        L     IH F ++ G+V +  V  AL ++Y++   +  A
Sbjct: 439 GVKPDLVTMLSILHACSDLQDLKSGKVIHGFAVRHGMVEDVFVCNALLSLYAKCVCVREA 498

Query: 366 RKLFDESSEKSLASWNAMIAGY-----------------------------------TQN 390
           + +FD    + +ASWN ++  Y                                    +N
Sbjct: 499 QVVFDLIPHREVASWNGILTAYFTNKEYEKGLYMFSQMNRDEVKADEITWSVVIGGCVKN 558

Query: 391 GLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVS 450
              EEA+ +F++MQ     P+  T+ SIL AC+    + +GK +H  V     + ++  +
Sbjct: 559 SRIEEAMEIFRKMQTMGFKPDETTIYSILRACSLSECLRMGKEIHCYVFRHWKDWDLART 618

Query: 451 TALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIR 510
            AL+DMYAKCG +  +R +FD+M  K   +WNTMI   G+HG+G EAL LF +ML S ++
Sbjct: 619 NALVDMYAKCGGLSLSRNVFDMMPIKDVFSWNTMIFANGMHGNGKEALSLFEKMLLSMVK 678

Query: 511 PSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALE 570
           P   TF  VL ACSH+ LV EG +IF SM  DH  +P AEHY C+VDI  RAG LE+A  
Sbjct: 679 PDSATFTCVLSACSHSMLVEEGVQIFNSMSRDHLVEPEAEHYTCVVDIYSRAGCLEEAYG 738

Query: 571 FIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERD 630
           FI+ + +EP    W A L  C ++K+  LA+++++KLFE+DP     +V L NI    + 
Sbjct: 739 FIQRMPMEPTAIAWKAFLAGCRVYKNVELAKISAKKLFEIDPNGSANYVTLFNILVTAKL 798

Query: 631 YLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMRE 690
           + +A+ +R+++K+R + K PGC+   VG   H F +GD+ + +S  IY  L++L  K++ 
Sbjct: 799 WSEASKIRKLMKERGITKTPGCSWFHVGNRVHTFVAGDKSNMESDKIYNFLDELFAKIKA 858

Query: 691 AGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTA 750
           AG++ +T   LHD+++EEK   +  HSEKLA+AFG++     + IR+ KNLR+C DCH A
Sbjct: 859 AGYKPDTDYVLHDIDQEEKAESLCNHSEKLAVAFGILNLNGQSTIRVFKNLRICGDCHNA 918

Query: 751 TKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
            K++S V G  IVVRD+ RFHHFK G CSC D+W
Sbjct: 919 IKYMSNVVGVTIVVRDSLRFHHFKNGNCSCKDFW 952



 Score =  240 bits (612), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 145/460 (31%), Positives = 242/460 (52%), Gaps = 11/460 (2%)

Query: 87  MPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVG 146
           +P  +I  YT  R    + PD   +  V  A +A  D       H  A   G  SD+ +G
Sbjct: 20  LPNEAIKIYTSSRAR-GIKPDKPVFMAVAKACAASRDALKVKQFHDDATRCGVMSDVSIG 78

Query: 147 AALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCF-QDSIWVFGDMVRNGG 205
            A +  Y K   V+ AR+VFD +  +D V WNS+ S    NC F Q  + VF  M  N  
Sbjct: 79  NAFIHAYGKCKCVEGARRVFDDLVARDVVTWNSL-SACYVNCGFPQQGLNVFRKMGLNK- 136

Query: 206 TWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAE 265
              +  +V+++LP  +++Q+L+ G EI    ++ G  + V+V +  V+FY+KC  V  A+
Sbjct: 137 VKANPLTVSSILPGCSDLQDLKSGKEIHGFVVRHGMVEDVFVSSAFVNFYAKCLCVREAQ 196

Query: 266 LLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFG 325
            +F  +   D+++ N++ S Y   G  +  L +FR+++    + +  T+  ++       
Sbjct: 197 TVFDLMPHRDVVTWNSLSSCYVNCGFPQKGLNVFREMVLDGVKPDPVTVSCILSACSDLQ 256

Query: 326 HLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIA 385
            L     IH F LK G+V N  V  AL  +Y     +  A+ +FD    +++ +WN++ +
Sbjct: 257 DLKSGKAIHGFALKHGMVENVFVSNALVNLYESCLCVREAQAVFDLMPHRNVITWNSLAS 316

Query: 386 GYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFES 445
            Y   G  ++ +++F+EM  + V P+P+ +SSIL AC+QL  +  GK +H          
Sbjct: 317 CYVNCGFPQKGLNVFREMGLNGVKPDPMAMSSILPACSQLKDLKSGKTIHGFAVKHGMVE 376

Query: 446 NIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEML 505
           +++V TAL+++YA C  + EA+ +FDLM H++ VTWN++ S Y   G   + L +F EM+
Sbjct: 377 DVFVCTALVNLYANCLCVREAQTVFDLMPHRNVVTWNSLSSCYVNCGFPQKGLNVFREMV 436

Query: 506 HSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGF 545
            +G++P  VT LS+L+ACS    ++ G  I       HGF
Sbjct: 437 LNGVKPDLVTMLSILHACSDLQDLKSGKVI-------HGF 469



 Score =  236 bits (601), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 151/544 (27%), Positives = 269/544 (49%), Gaps = 8/544 (1%)

Query: 8   SRNLFLSLLKG---AKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALF 64
            + +F+++ K    ++   ++ Q H      G  +D+S      H     K    AR +F
Sbjct: 39  DKPVFMAVAKACAASRDALKVKQFHDDATRCGVMSDVSIGNAFIHAYGKCKCVEGARRVF 98

Query: 65  FSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDR 124
             +   D+  +N +   + N   P+  +  +  +  N  +  +  T S +L   S   D 
Sbjct: 99  DDLVARDVVTWNSLSACYVNCGFPQQGLNVFRKMGLNK-VKANPLTVSSILPGCSDLQDL 157

Query: 125 SIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGL 184
             G  +HG  +  G   D+FV +A V+ Y K   V+ A+ VFD MP +D V WNS+ S  
Sbjct: 158 KSGKEIHGFVVRHGMVEDVFVSSAFVNFYAKCLCVREAQTVFDLMPHRDVVTWNSL-SSC 216

Query: 185 MKNCCF-QDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHD 243
             NC F Q  + VF +MV + G   D  +V+ +L A +++Q+L+ G  I    LK G  +
Sbjct: 217 YVNCGFPQKGLNVFREMVLD-GVKPDPVTVSCILSACSDLQDLKSGKAIHGFALKHGMVE 275

Query: 244 HVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLL 303
           +V+V   LV+ Y  C  V  A+ +F  +   ++I+ N++ S Y   G  +  L +FR++ 
Sbjct: 276 NVFVSNALVNLYESCLCVREAQAVFDLMPHRNVITWNSLASCYVNCGFPQKGLNVFREMG 335

Query: 304 ASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEME 363
            +  + +   +  ++P       L     IH F +K G+V +  V TAL  +Y+    + 
Sbjct: 336 LNGVKPDPMAMSSILPACSQLKDLKSGKTIHGFAVKHGMVEDVFVCTALVNLYANCLCVR 395

Query: 364 AARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACA 423
            A+ +FD    +++ +WN++ + Y   G  ++ +++F+EM  + V P+ VT+ SIL AC+
Sbjct: 396 EAQTVFDLMPHRNVVTWNSLSSCYVNCGFPQKGLNVFREMVLNGVKPDLVTMLSILHACS 455

Query: 424 QLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNT 483
            L  +  GK +H          +++V  AL+ +YAKC  + EA+ +FDL+ H+   +WN 
Sbjct: 456 DLQDLKSGKVIHGFAVRHGMVEDVFVCNALLSLYAKCVCVREAQVVFDLIPHREVASWNG 515

Query: 484 MISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDH 543
           +++ Y  +    + L +FS+M    ++   +T+  V+  C     + E  EIF+ M    
Sbjct: 516 ILTAYFTNKEYEKGLYMFSQMNRDEVKADEITWSVVIGGCVKNSRIEEAMEIFRKM-QTM 574

Query: 544 GFKP 547
           GFKP
Sbjct: 575 GFKP 578



 Score = 66.6 bits (161), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 42/156 (26%), Positives = 72/156 (46%), Gaps = 7/156 (4%)

Query: 390 NGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYV 449
           +GL  EAI ++   +A  + P+     ++  ACA        K  H+        S++ +
Sbjct: 18  HGLPNEAIKIYTSSRARGIKPDKPVFMAVAKACAASRDALKVKQFHDDATRCGVMSDVSI 77

Query: 450 STALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGI 509
             A I  Y KC  +  AR +FD +  +  VTWN++ + Y   G   + L +F +M  + +
Sbjct: 78  GNAFIHAYGKCKCVEGARRVFDDLVARDVVTWNSLSACYVNCGFPQQGLNVFRKMGLNKV 137

Query: 510 RPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGF 545
           + + +T  S+L  CS    ++ G EI       HGF
Sbjct: 138 KANPLTVSSILPGCSDLQDLKSGKEI-------HGF 166


>gi|147865382|emb|CAN79811.1| hypothetical protein VITISV_018821 [Vitis vinifera]
          Length = 871

 Score =  495 bits (1274), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 293/827 (35%), Positives = 446/827 (53%), Gaps = 56/827 (6%)

Query: 10  NLFLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRL-SDFKATCYARALFFSIP 68
           +L  +L    K+ +    TH Q+++ G  +D + +  +     S  KA    R L  S  
Sbjct: 49  DLTSTLFHQCKSLASAELTHQQLLVQGLPHDPTHIISMYLTFNSPAKALSVLRRLHPS-- 106

Query: 69  KPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGV 128
              +F +N +IR   +    +  +  Y  +++     PD++T+ FVL A         G 
Sbjct: 107 SHTVFWWNQLIRRSVHLGFLEDVLQLYRRMQR-LGWRPDHYTFPFVLKACGEIPSFRCGA 165

Query: 129 LLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEK---DTVLWNSMISGLM 185
            +H     SG+  ++FVG  LV +Y +    ++AR+VFD+M E+   D V WNS+++  M
Sbjct: 166 SVHAVVFASGFEWNVFVGNGLVSMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAAYM 225

Query: 186 KNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHV 245
           +      ++ +F  M  + G   D+ S+  VLPA A V     G ++    L+ G  + V
Sbjct: 226 QGGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPACASVGAWSRGKQVHGYALRSGLFEDV 285

Query: 246 YVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLF------ 299
           +V   +V  Y+KCG +E A  +F  +   D++S NAM++GY+  G+ + +L LF      
Sbjct: 286 FVGNAVVDMYAKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREE 345

Query: 300 -----------------------------RQLLASAERVNSSTIVGLIPVFYPFG---HL 327
                                        RQ+L      N  T+V L+      G   H 
Sbjct: 346 KIELNVVTWSAVIAGYAQRGLGFEALDVFRQMLLCGSEPNVVTLVSLLSGCASAGTLLHG 405

Query: 328 HLTNCIHSFCLKSGIVSNSS-----VLTALSTVYSRLNEMEAARKLFD--ESSEKSLASW 380
             T+C H+      +  N       V+ AL  +YS+    +AAR +FD     ++S+ +W
Sbjct: 406 KETHC-HAIKWILNLDENDPGDDLMVINALIDMYSKCKSPKAARAMFDLIPPKDRSVVTW 464

Query: 381 NAMIAGYTQNGLTEEAISLFQEMQASK--VAPNPVTVSSILSACAQLGAISLGKWVHELV 438
             +I G  Q+G   EA+ LF +M      V PN  T+S  L ACA+LGA+  G+ +H  V
Sbjct: 465 TVLIGGNAQHGEANEALELFSQMLQPDNFVMPNAFTISCALMACARLGALRFGRQIHAYV 524

Query: 439 KSRNFESN-IYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEA 497
               FES  ++V+  LIDMY+K G++  AR +FD M  ++ V+W ++++GYG+HG G EA
Sbjct: 525 LRNRFESAMLFVANCLIDMYSKSGDVDAARVVFDNMHQRNGVSWTSLMTGYGMHGRGEEA 584

Query: 498 LQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVD 557
           LQ+F EM    + P GVTF+ VLYACSH+G+V +G   F  M  D G  P AEHYACMVD
Sbjct: 585 LQIFYEMQKVXLVPDGVTFVVVLYACSHSGMVDQGINYFNGMNKDFGVVPGAEHYACMVD 644

Query: 558 ILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGY 617
           +L RAG+L++A+E I+G+ ++P PAVW ALL AC ++ +  L   A+ +L EL+  N G 
Sbjct: 645 LLSRAGRLDEAMELIRGMPMKPTPAVWVALLSACRVYANVELGEYAANQLLELESGNDGS 704

Query: 618 HVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAI 677
           + LLSNIY+  R +   A +R ++K   + K PGC+ ++       F +GD  HP S  I
Sbjct: 705 YTLLSNIYANARCWKDVARIRYLMKNTGIKKRPGCSWVQGRKGTATFFAGDWSHPMSQQI 764

Query: 678 YAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRI 737
           Y +L  L  +++  G+  +   ALHDV++EEK  ++  HSEKLA+A+G++ T PG  IRI
Sbjct: 765 YDLLRDLMQRIKALGYVPDNRFALHDVDDEEKGDLLSEHSEKLALAYGILTTAPGAPIRI 824

Query: 738 IKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
            KNLR C DCH+A  +IS +    I+VRD++RFHHFK G CSC  YW
Sbjct: 825 TKNLRACGDCHSAFTYISIIIEHEIIVRDSSRFHHFKNGSCSCRGYW 871


>gi|357516765|ref|XP_003628671.1| hypothetical protein MTR_8g063290 [Medicago truncatula]
 gi|355522693|gb|AET03147.1| hypothetical protein MTR_8g063290 [Medicago truncatula]
          Length = 659

 Score =  495 bits (1274), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 248/622 (39%), Positives = 373/622 (59%), Gaps = 35/622 (5%)

Query: 163 RKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAE 222
           RKVFD+M +++ V +N MI   + N  + D + VF +MV NGG   D+ +   VL A + 
Sbjct: 73  RKVFDEMSDRNVVFYNVMIRSYVNNHRYDDGLLVFREMV-NGGFRPDNYTYPCVLKACSC 131

Query: 223 VQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAM 282
            + LR G+ I    LK+G   +++V  GL++ Y KCG +  A  +F +++  D++S N+M
Sbjct: 132 SENLRYGLLIHGDVLKVGLDFNLFVGNGLIAMYGKCGCLFEARRVFDEMIWKDVVSWNSM 191

Query: 283 ISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGI 342
           ++GY  N + + +L + R++    ++ +  T+  L+P                       
Sbjct: 192 VAGYAHNMRFDDALEICREMEDYGQKPDGCTMASLMPA---------------------- 229

Query: 343 VSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQE 402
           V+N+S    L              K+F     K+L SWN MI  Y +N L  +A+ L+ +
Sbjct: 230 VANTSSENVLYV-----------EKIFVNLERKNLISWNVMIRVYMKNSLPTQAVDLYLQ 278

Query: 403 MQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGN 462
           M+  +V P+ +T +S+L AC  L A+ LG+ +HE V+ +    N+ +  +LIDMYA+CG 
Sbjct: 279 MEKCRVEPDAITFASVLPACGDLSALLLGRRIHEYVEKKKLCPNLLLENSLIDMYARCGC 338

Query: 463 IVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYA 522
           + +A+ +FD M  +   +W ++IS YG+ G G  A+ LF+EML+SG  P  + F+++L A
Sbjct: 339 LDDAKRVFDRMKFRDVASWTSLISAYGMTGQGCNAVALFTEMLNSGQAPDSIAFVAILSA 398

Query: 523 CSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPA 582
           CSH+GL+ EG   F+ M  D+   P  EHYAC+VD+LGRAG++++A   IK + +EP   
Sbjct: 399 CSHSGLLDEGRIYFKQMTDDYRITPRIEHYACLVDLLGRAGRVDEAYNIIKQMPIEPNER 458

Query: 583 VWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVK 642
           VW  LL +C +  + ++  +A++ L +L PE  GY+VLLSNIY+    + +   +R V+K
Sbjct: 459 VWATLLSSCRVFTNMDIGILAADNLLQLAPEQSGYYVLLSNIYAKAGRWKEVTEIRSVMK 518

Query: 643 KRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALH 702
           ++K+ K PG + +E+    H F +GD  HPQS  IY  L  L  KM+E G+  ET +ALH
Sbjct: 519 RKKIRKTPGISNVELNNQVHTFLAGDTSHPQSKEIYEELGVLVAKMKELGYVPETDSALH 578

Query: 703 DVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVI 762
           DVEEE+KE  + VHSEKLAI F L+ T+   +IRI KNLRVC DCH A K ISK+  R I
Sbjct: 579 DVEEEDKEGHLAVHSEKLAIVFALLNTQE-YQIRITKNLRVCGDCHIAAKLISKIVEREI 637

Query: 763 VVRDANRFHHFKGGVCSCGDYW 784
           +VRD NRFHHFK GVCSCGDYW
Sbjct: 638 IVRDTNRFHHFKDGVCSCGDYW 659



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 129/482 (26%), Positives = 217/482 (45%), Gaps = 40/482 (8%)

Query: 61  RALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASA 120
           R +F  +   ++  +NV+IR + NN      +  +  +  N    PDN+TY  VL A S 
Sbjct: 73  RKVFDEMSDRNVVFYNVMIRSYVNNHRYDDGLLVFREM-VNGGFRPDNYTYPCVLKACSC 131

Query: 121 CCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSM 180
             +   G+L+HG  +  G   +LFVG  L+ +Y K   +  AR+VFD+M  KD V WNSM
Sbjct: 132 SENLRYGLLIHGDVLKVGLDFNLFVGNGLIAMYGKCGCLFEARRVFDEMIWKDVVSWNSM 191

Query: 181 ISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLG 240
           ++G   N  F D++ +  +M  + G   D  ++A+++PAVA                   
Sbjct: 192 VAGYAHNMRFDDALEICREM-EDYGQKPDGCTMASLMPAVANTSS--------------- 235

Query: 241 FHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFR 300
             + +YV                 E +F ++ R +LIS N MI  Y  N     ++ L+ 
Sbjct: 236 -ENVLYV-----------------EKIFVNLERKNLISWNVMIRVYMKNSLPTQAVDLYL 277

Query: 301 QLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLN 360
           Q+       ++ T   ++P       L L   IH +  K  +  N  +  +L  +Y+R  
Sbjct: 278 QMEKCRVEPDAITFASVLPACGDLSALLLGRRIHEYVEKKKLCPNLLLENSLIDMYARCG 337

Query: 361 EMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILS 420
            ++ A+++FD    + +ASW ++I+ Y   G    A++LF EM  S  AP+ +   +ILS
Sbjct: 338 CLDDAKRVFDRMKFRDVASWTSLISAYGMTGQGCNAVALFTEMLNSGQAPDSIAFVAILS 397

Query: 421 ACAQLGAISLGK-WVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMS-HKSE 478
           AC+  G +  G+ +  ++         I     L+D+  + G + EA  +   M    +E
Sbjct: 398 ACSHSGLLDEGRIYFKQMTDDYRITPRIEHYACLVDLLGRAGRVDEAYNIIKQMPIEPNE 457

Query: 479 VTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSG-VTFLSVLYACSHAGLVREGDEIFQ 537
             W T++S   +  +    +     +L      SG    LS +YA   AG  +E  EI  
Sbjct: 458 RVWATLLSSCRVFTNMDIGILAADNLLQLAPEQSGYYVLLSNIYA--KAGRWKEVTEIRS 515

Query: 538 SM 539
            M
Sbjct: 516 VM 517



 Score =  108 bits (271), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 59/182 (32%), Positives = 95/182 (52%)

Query: 344 SNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEM 403
            N S+   L   Y+   E    RK+FDE S++++  +N MI  Y  N   ++ + +F+EM
Sbjct: 51  QNPSLGIKLMRSYAACGEPGLTRKVFDEMSDRNVVFYNVMIRSYVNNHRYDDGLLVFREM 110

Query: 404 QASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNI 463
                 P+  T   +L AC+    +  G  +H  V     + N++V   LI MY KCG +
Sbjct: 111 VNGGFRPDNYTYPCVLKACSCSENLRYGLLIHGDVLKVGLDFNLFVGNGLIAMYGKCGCL 170

Query: 464 VEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYAC 523
            EAR +FD M  K  V+WN+M++GY  +    +AL++  EM   G +P G T  S++ A 
Sbjct: 171 FEARRVFDEMIWKDVVSWNSMVAGYAHNMRFDDALEICREMEDYGQKPDGCTMASLMPAV 230

Query: 524 SH 525
           ++
Sbjct: 231 AN 232



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 84/380 (22%), Positives = 160/380 (42%), Gaps = 35/380 (9%)

Query: 211 TSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRD 270
           TS   +  A+ +  +++   ++  +   L  H +  +   L+  Y+ CGE      +F +
Sbjct: 19  TSFGLLAKALDQNPDIKTLKKLHTMIFYLNSHQNPSLGIKLMRSYAACGEPGLTRKVFDE 78

Query: 271 IVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLT 330
           +   +++  N MI  Y  N + +  L +FR+++    R ++ T   ++       +L   
Sbjct: 79  MSDRNVVFYNVMIRSYVNNHRYDDGLLVFREMVNGGFRPDNYTYPCVLKACSCSENLRYG 138

Query: 331 NCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQN 390
             IH   LK G+  N  V   L  +Y +   +  AR++FDE   K + SWN+M+AGY  N
Sbjct: 139 LLIHGDVLKVGLDFNLFVGNGLIAMYGKCGCLFEARRVFDEMIWKDVVSWNSMVAGYAHN 198

Query: 391 GLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVS 450
              ++A+ + +EM+     P+  T++S++ A A   +                       
Sbjct: 199 MRFDDALEICREMEDYGQKPDGCTMASLMPAVANTSS----------------------- 235

Query: 451 TALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIR 510
                      N++   ++F  +  K+ ++WN MI  Y  +    +A+ L+ +M    + 
Sbjct: 236 ----------ENVLYVEKIFVNLERKNLISWNVMIRVYMKNSLPTQAVDLYLQMEKCRVE 285

Query: 511 PSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALE 570
           P  +TF SVL AC     +  G  I +  +      P       ++D+  R G L+ A  
Sbjct: 286 PDAITFASVLPACGDLSALLLGRRIHE-YVEKKKLCPNLLLENSLIDMYARCGCLDDAKR 344

Query: 571 FIKGLAVEPGPAVWGALLGA 590
               +      A W +L+ A
Sbjct: 345 VFDRMKFR-DVASWTSLISA 363



 Score = 72.8 bits (177), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 44/165 (26%), Positives = 84/165 (50%), Gaps = 6/165 (3%)

Query: 59  YARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAA 118
           Y   +F ++ + +L  +NV+IR +  N +P  ++  Y  + K   + PD  T++ VL A 
Sbjct: 240 YVEKIFVNLERKNLISWNVMIRVYMKNSLPTQAVDLYLQMEK-CRVEPDAITFASVLPAC 298

Query: 119 SACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWN 178
                  +G  +H +        +L +  +L+D+Y +   +  A++VFD+M  +D   W 
Sbjct: 299 GDLSALLLGRRIHEYVEKKKLCPNLLLENSLIDMYARCGCLDDAKRVFDRMKFRDVASWT 358

Query: 179 SMIS--GLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVA 221
           S+IS  G+    C  +++ +F +M+ N G   DS +  A+L A +
Sbjct: 359 SLISAYGMTGQGC--NAVALFTEML-NSGQAPDSIAFVAILSACS 400


>gi|449528002|ref|XP_004170996.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g12770-like, partial [Cucumis sativus]
          Length = 658

 Score =  495 bits (1274), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 251/650 (38%), Positives = 389/650 (59%), Gaps = 2/650 (0%)

Query: 135 IVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSI 194
           IVSG     F+    ++    F  V  A K F ++ E D +LWN++I G  +       I
Sbjct: 11  IVSGLHKCRFLMIKFINACLHFGDVNYAHKAFREVSEPDILLWNAIIKGYTQKNIVDAPI 70

Query: 195 WVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSF 254
            ++ DM +      +  +   VL A        +G +I     K GF  +V+V   LVS 
Sbjct: 71  RMYMDM-QISQVHPNCFTFLYVLKACGGTSVEGIGKQIHGQTFKYGFGSNVFVQNSLVSM 129

Query: 255 YSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTI 314
           Y+K G++  A ++F  +    ++S  ++ISGY  NG    +L +F+++     + +   +
Sbjct: 130 YAKFGQISYARIVFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIAL 189

Query: 315 VGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSE 374
           V ++  +     L     IH    K G+     ++ +L+T+Y++   +E AR  F+   +
Sbjct: 190 VSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDIVISLTTMYAKRGLVEVARFFFNRMEK 249

Query: 375 KSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWV 434
            +L  WNAMI+GY  NG  EEAI LF+EM    +  + +T+ S + A AQ+G++ L +W+
Sbjct: 250 PNLILWNAMISGYANNGYGEEAIKLFREMITKNIRVDSITMRSAVLASAQVGSLELARWL 309

Query: 435 HELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHG 494
              +    +  + +V+T LIDMYAKCG+I  AR +FD ++ K  V W+ MI GYGLHGHG
Sbjct: 310 DGYISKSEYRDDTFVNTGLIDMYAKCGSIYLARCVFDRVADKDVVLWSVMIMGYGLHGHG 369

Query: 495 LEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYAC 554
            EA+ L++EM  +G+ P+  TF+ +L AC ++GLV+EG E+F  M  DHG +P  +HY+C
Sbjct: 370 QEAICLYNEMKQAGVCPNDGTFIGLLTACKNSGLVKEGWELFHLM-PDHGIEPHHQHYSC 428

Query: 555 MVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPEN 614
           +VD+LGRAG L +A +FI  + ++PG +VWGALL AC IH+   L  +A+E+LF LDP N
Sbjct: 429 VVDLLGRAGYLNQAYDFIMSMPIKPGVSVWGALLSACKIHRKVRLGEIAAEQLFILDPYN 488

Query: 615 VGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQS 674
            G++V LSN+Y++   + + A VR ++ ++ L K  G + IE+ G    F  GD+ HP+S
Sbjct: 489 TGHYVQLSNLYASAHLWTRVANVRLMMTQKGLNKDLGHSSIEINGNLETFQVGDRSHPKS 548

Query: 675 TAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTE 734
             I+  L++L  +++ AG+     + LHD+  EE E  +  HSE+LA+A+G+I+T PGT 
Sbjct: 549 KEIFEELDRLEKRLKAAGYVPHMESVLHDLNHEEIEETLCHHSERLAVAYGIISTAPGTT 608

Query: 735 IRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           +RI KNLR C++CH+A K ISK+  R I++RDA RFHHFK GVCSCGD+W
Sbjct: 609 LRITKNLRACINCHSAIKLISKLVDREIIIRDAKRFHHFKDGVCSCGDFW 658



 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 141/469 (30%), Positives = 237/469 (50%), Gaps = 3/469 (0%)

Query: 24  QLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFS 83
            L Q + Q+I+ G       + K  +    F    YA   F  + +PD+ L+N II+G++
Sbjct: 2   HLDQVYVQLIVSGLHKCRFLMIKFINACLHFGDVNYAHKAFREVSEPDILLWNAIIKGYT 61

Query: 84  NNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDL 143
              +  + I  Y  ++  + + P+ FT+ +VL A        IG  +HG     G+GS++
Sbjct: 62  QKNIVDAPIRMYMDMQI-SQVHPNCFTFLYVLKACGGTSVEGIGKQIHGQTFKYGFGSNV 120

Query: 144 FVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRN 203
           FV  +LV +Y KF  +  AR VFDK+ ++  V W S+ISG ++N    +++ VF +M R 
Sbjct: 121 FVQNSLVSMYAKFGQISYARIVFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFKEM-RQ 179

Query: 204 GGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVER 263
                D  ++ +V+ A   V++L  G  I  L  KLG      ++  L + Y+K G VE 
Sbjct: 180 CNVKPDWIALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDIVISLTTMYAKRGLVEV 239

Query: 264 AELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYP 323
           A   F  + +P+LI  NAMISGY  NG  E +++LFR+++    RV+S T+   +     
Sbjct: 240 ARFFFNRMEKPNLILWNAMISGYANNGYGEEAIKLFREMITKNIRVDSITMRSAVLASAQ 299

Query: 324 FGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAM 383
            G L L   +  +  KS    ++ V T L  +Y++   +  AR +FD  ++K +  W+ M
Sbjct: 300 VGSLELARWLDGYISKSEYRDDTFVNTGLIDMYAKCGSIYLARCVFDRVADKDVVLWSVM 359

Query: 384 IAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNF 443
           I GY  +G  +EAI L+ EM+ + V PN  T   +L+AC   G +  G  +  L+     
Sbjct: 360 IMGYGLHGHGQEAICLYNEMKQAGVCPNDGTFIGLLTACKNSGLVKEGWELFHLMPDHGI 419

Query: 444 ESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVT-WNTMISGYGLH 491
           E +    + ++D+  + G + +A +    M  K  V+ W  ++S   +H
Sbjct: 420 EPHHQHYSCVVDLLGRAGYLNQAYDFIMSMPIKPGVSVWGALLSACKIH 468


>gi|413943926|gb|AFW76575.1| hypothetical protein ZEAMMB73_444227 [Zea mays]
          Length = 869

 Score =  495 bits (1274), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 295/797 (37%), Positives = 438/797 (54%), Gaps = 62/797 (7%)

Query: 33  IIHGFQNDLSTVTKLAH-RLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNEMPKSS 91
           ++HGF   ++     A+ R  D  A   A ALF ++P  D   FN +I          ++
Sbjct: 90  LLHGFTPAVANALLTAYARCGDLTA---ALALFNAMPSRDAVTFNSLI----------AA 136

Query: 92  ICFYTHLRKNTALTPD---------NFTYSFVLSAASACC-DRSIGVLLHGHAIVSGY-- 139
           +C +           D         +FT   VL A S    D  +G   H  A+ +G+  
Sbjct: 137 LCLFRRWLPALDALRDMLLEGHPLSSFTLVSVLLACSHLAEDLRLGREAHAFALKNGFLD 196

Query: 140 GSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDT-----VLWNSMISGLMKNCCFQDSI 194
           G + F   AL+ +Y +   V  A+ +F  +   D+     V WN+M+S L+++    ++I
Sbjct: 197 GDERFAFNALLSMYARLGLVDDAQMLFGSVDTTDSPGGGVVTWNTMVSLLVQSGRCGEAI 256

Query: 195 WVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLK-LGFHDHVYVLTGLVS 253
            V  DMV  G    D  + A+ LPA ++++ L LG E+    LK      + +V + LV 
Sbjct: 257 EVIYDMVARG-VRPDGITFASALPACSQLEMLSLGREMHAYVLKDSDLAANSFVASALVD 315

Query: 254 FYSKCGEVERAELLFRDIV---RPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVN 310
            Y+    V  A  +F D+V      L   NAM+ GY   G  E +L LF ++ A A  V 
Sbjct: 316 MYASHERVGVARRVF-DMVPGGHRQLGLWNAMVCGYAQAGMDEEALELFARMEAEAGVVP 374

Query: 311 S-STIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLF 369
           S +TI G++P             +H + LK G+  N  V  AL  +Y+RL +MEAAR +F
Sbjct: 375 SETTIAGVLPACARSETFAGKEAVHGYVLKRGMADNPFVQNALMDLYARLGDMEAARWIF 434

Query: 370 DESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQAS------------------KVAPN 411
                + + SWN +I G    G   +A  L +EMQ                     V PN
Sbjct: 435 AAIEPRDVVSWNTLITGCVVQGHIHDAFQLVREMQQQGRFTDATTEDGIAGTDEEPVVPN 494

Query: 412 PVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFD 471
            VT+ ++L  CA L A + GK +H        +S+I V +AL+DMYAKCG +  +R +FD
Sbjct: 495 NVTLMTLLPGCAMLAAPAKGKEIHGYAMRHALDSDIAVGSALVDMYAKCGCLALSRAVFD 554

Query: 472 LMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSG-IRPSGVTFLSVLYACSHAGLVR 530
            +  ++ +TWN +I  YG+HG G EA+ LF  M+ S   +P+ VTF++ L ACSH+G+V 
Sbjct: 555 RLPKRNVITWNVLIMAYGMHGLGDEAIALFDRMVMSNEAKPNEVTFIAALAACSHSGMVD 614

Query: 531 EGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGP---AVWGAL 587
            G E+F SM  +HG +P  + +AC VDILGRAG+L++A   I  +  EPG    + W + 
Sbjct: 615 RGMELFHSMKRNHGVQPTPDLHACAVDILGRAGRLDEAYSIITSM--EPGEQQVSAWSSF 672

Query: 588 LGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLA 647
           LGAC +H++  L  +A+E+LF+L+P+   ++VLL NIYSA   + +++ VR  +++R ++
Sbjct: 673 LGACRLHRNVPLGEIAAERLFQLEPDEASHYVLLCNIYSAAGLWEKSSEVRNRMRQRGVS 732

Query: 648 KAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEE 707
           K PGC+ IE+ G  H F +G+  HP+ST ++A ++ L  +MR  G+  +T + LHD+EE 
Sbjct: 733 KEPGCSWIELDGVIHRFMAGESAHPESTLVHAHMDALWERMRNQGYTPDTSSVLHDIEES 792

Query: 708 EKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDA 767
           EK  +++ HSEKLAIAFGL+ T PG  IR+ KNLRVC DCH A KFIS++ GR IV+RD 
Sbjct: 793 EKAAILRYHSEKLAIAFGLLRTPPGATIRVAKNLRVCNDCHEAAKFISRMVGREIVLRDV 852

Query: 768 NRFHHFKGGVCSCGDYW 784
            RFHHF  G CSCGDYW
Sbjct: 853 RRFHHFVDGACSCGDYW 869


>gi|449451892|ref|XP_004143694.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g12770-like [Cucumis sativus]
          Length = 673

 Score =  495 bits (1274), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 250/650 (38%), Positives = 390/650 (60%), Gaps = 2/650 (0%)

Query: 135 IVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSI 194
           IVSG     F+    ++    F  V  A K F ++ E D +LWN++I G  +       I
Sbjct: 26  IVSGLHKCRFLMIKFINACLHFGDVNYAHKAFREVSEPDILLWNAIIKGYTQKNIVDAPI 85

Query: 195 WVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSF 254
            ++ DM +      +  +   VL A        +G +I     K GF  +V+V   LVS 
Sbjct: 86  RMYMDM-QISQVHPNCFTFLYVLKACGGTSVEGIGKQIHGQTFKYGFGSNVFVQNSLVSM 144

Query: 255 YSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTI 314
           Y+K G++  A ++F  +    ++S  ++ISGY  NG    +L +F+++     + +   +
Sbjct: 145 YAKFGQISYARIVFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIAL 204

Query: 315 VGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSE 374
           V ++  +     L     IH    K G+     ++ +L+T+Y++   +E AR  F+   +
Sbjct: 205 VSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDIVISLTTMYAKRGLVEVARFFFNRMEK 264

Query: 375 KSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWV 434
            +L  WNAMI+GY  NG  EEAI LF+EM    +  + +T+ S + A AQ+G++ L +W+
Sbjct: 265 PNLILWNAMISGYANNGYGEEAIKLFREMITKNIRVDSITMRSAVLASAQVGSLELARWL 324

Query: 435 HELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHG 494
              +    +  + +V+T LIDMYAKCG+I  AR +FD ++ K  V W+ MI GYGLHGHG
Sbjct: 325 DGYISKSEYRDDTFVNTGLIDMYAKCGSIYLARCVFDRVADKDVVLWSVMIMGYGLHGHG 384

Query: 495 LEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYAC 554
            EA+ L++EM  +G+ P+  TF+ +L AC ++GLV+EG E+F  ++ DHG +P  +HY+C
Sbjct: 385 QEAICLYNEMKQAGVCPNDGTFIGLLTACKNSGLVKEGWELFH-LMPDHGIEPHHQHYSC 443

Query: 555 MVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPEN 614
           +VD+LGRAG L +A +FI  + ++PG +VWGALL AC IH+   L  +A+E+LF LDP N
Sbjct: 444 VVDLLGRAGYLNQAYDFIMSMPIKPGVSVWGALLSACKIHRKVRLGEIAAEQLFILDPYN 503

Query: 615 VGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQS 674
            G++V LSN+Y++   + + A VR ++ ++ L K  G + IE+ G    F  GD+ HP+S
Sbjct: 504 TGHYVQLSNLYASAHLWTRVANVRLMMTQKGLNKDLGHSSIEINGNLETFQVGDRSHPKS 563

Query: 675 TAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTE 734
             I+  L++L  +++ AG+     + LHD+  EE E  +  HSE+LA+A+G+I+T PGT 
Sbjct: 564 KEIFEELDRLEKRLKAAGYVPHMESVLHDLNHEEIEETLCHHSERLAVAYGIISTAPGTT 623

Query: 735 IRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           +RI KNLR C++CH+A K ISK+  R I++RDA RFHHFK GVCSCGD+W
Sbjct: 624 LRITKNLRACINCHSAIKLISKLVDREIIIRDAKRFHHFKDGVCSCGDFW 673



 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 141/469 (30%), Positives = 237/469 (50%), Gaps = 3/469 (0%)

Query: 24  QLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFS 83
            L Q + Q+I+ G       + K  +    F    YA   F  + +PD+ L+N II+G++
Sbjct: 17  HLDQVYVQLIVSGLHKCRFLMIKFINACLHFGDVNYAHKAFREVSEPDILLWNAIIKGYT 76

Query: 84  NNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDL 143
              +  + I  Y  ++  + + P+ FT+ +VL A        IG  +HG     G+GS++
Sbjct: 77  QKNIVDAPIRMYMDMQI-SQVHPNCFTFLYVLKACGGTSVEGIGKQIHGQTFKYGFGSNV 135

Query: 144 FVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRN 203
           FV  +LV +Y KF  +  AR VFDK+ ++  V W S+ISG ++N    +++ VF +M R 
Sbjct: 136 FVQNSLVSMYAKFGQISYARIVFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFKEM-RQ 194

Query: 204 GGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVER 263
                D  ++ +V+ A   V++L  G  I  L  KLG      ++  L + Y+K G VE 
Sbjct: 195 CNVKPDWIALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDIVISLTTMYAKRGLVEV 254

Query: 264 AELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYP 323
           A   F  + +P+LI  NAMISGY  NG  E +++LFR+++    RV+S T+   +     
Sbjct: 255 ARFFFNRMEKPNLILWNAMISGYANNGYGEEAIKLFREMITKNIRVDSITMRSAVLASAQ 314

Query: 324 FGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAM 383
            G L L   +  +  KS    ++ V T L  +Y++   +  AR +FD  ++K +  W+ M
Sbjct: 315 VGSLELARWLDGYISKSEYRDDTFVNTGLIDMYAKCGSIYLARCVFDRVADKDVVLWSVM 374

Query: 384 IAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNF 443
           I GY  +G  +EAI L+ EM+ + V PN  T   +L+AC   G +  G  +  L+     
Sbjct: 375 IMGYGLHGHGQEAICLYNEMKQAGVCPNDGTFIGLLTACKNSGLVKEGWELFHLMPDHGI 434

Query: 444 ESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVT-WNTMISGYGLH 491
           E +    + ++D+  + G + +A +    M  K  V+ W  ++S   +H
Sbjct: 435 EPHHQHYSCVVDLLGRAGYLNQAYDFIMSMPIKPGVSVWGALLSACKIH 483


>gi|168023826|ref|XP_001764438.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|54695178|dbj|BAD67154.1| PpPPR_91 [Physcomitrella patens]
 gi|162684302|gb|EDQ70705.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 868

 Score =  494 bits (1273), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 289/796 (36%), Positives = 425/796 (53%), Gaps = 46/796 (5%)

Query: 29  HAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNEMP 88
           H Q+   G + D+     L +  S F+    A  +F  +   D+  ++ +I  ++ N  P
Sbjct: 79  HKQLDELGVEIDIYLGNSLINFYSKFEDVASAEQVFRRMTLRDVVTWSSMIAAYAGNNHP 138

Query: 89  KSSICFYTHLRKNTA-LTPDNFTYSFVLSAASACCDRSI---GVLLHGHAIVSGYGSDLF 144
             +  F T  R   A + P+  T+   LS   AC + SI   G  +H      G  +D+ 
Sbjct: 139 AKA--FDTFERMTDANIEPNRITF---LSILKACNNYSILEKGRKIHTIVKAMGMETDVA 193

Query: 145 VGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNG 204
           V  AL+ +Y K   +  A +VF KM E++ V W ++I    ++    ++  ++  M++  
Sbjct: 194 VATALITMYSKCGEISVACEVFHKMTERNVVSWTAIIQANAQHRKLNEAFELYEQMLQ-A 252

Query: 205 GTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERA 264
           G   ++ +  ++L +    + L  G  I     + G    + V   L++ Y KC  V+ A
Sbjct: 253 GISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDMIVANALITMYCKCNSVQEA 312

Query: 265 ELLFRDIVRPDLISCNAMISGYTCNG-KTESSLRLFRQLLASAER----VNSSTIVGLIP 319
             +F  + + D+IS +AMI+GY  +G K + S+    QLL    R     N  T + ++ 
Sbjct: 313 REIFDRMSKRDVISWSAMIAGYAQSGYKDKESIDEVFQLLERMRREGVFPNKVTFMSILR 372

Query: 320 VFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLN------------------- 360
                G L     IH+   K G   + S+ TA+  +Y++                     
Sbjct: 373 ACTAHGALEQGRQIHAELSKVGFELDRSLQTAIFNMYAKCGSIYEAEQVFSKMANKNVVA 432

Query: 361 ------------EMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKV 408
                       ++ +A K+F E   +++ SWN MIAGY QNG   +   L   M+A   
Sbjct: 433 WTSFLSMYIKCGDLSSAEKVFSEMPTRNVVSWNLMIAGYAQNGDIVKVFELLSSMKAEGF 492

Query: 409 APNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARE 468
            P+ VTV +IL AC  L  +  GK VH        ES+  V+T+LI MY+KCG + EAR 
Sbjct: 493 QPDRVTVITILEACGALAGLERGKLVHAEAVKLGLESDTVVATSLIGMYSKCGQVAEART 552

Query: 469 LFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGL 528
           +FD MS++  V WN M++GYG HG GLEA+ LF  ML   + P+ +T  +V+ ACS AGL
Sbjct: 553 VFDKMSNRDTVAWNAMLAGYGQHGDGLEAVDLFKRMLKERVSPNEITLTAVISACSRAGL 612

Query: 529 VREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALL 588
           V+EG EIF+ M  D    P  +HY CMVD+LGRAG+L++A EFI+ +  EP  +VW ALL
Sbjct: 613 VQEGREIFRMMQEDFKMTPRKQHYGCMVDLLGRAGRLQEAEEFIQSMPCEPDISVWHALL 672

Query: 589 GACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAK 648
           GAC  H +  LA  A+  + EL+P     ++ LSNIY+    +  +  VR+V+  R L K
Sbjct: 673 GACKSHNNVQLAERAAHHILELEPSYASVYITLSNIYAQAGRWDDSTKVRRVMDDRGLKK 732

Query: 649 APGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEE 708
             G + IE+ G  H F + D  HP+  AI+A LE L  +M+EAG+  +    LHDV++ +
Sbjct: 733 DRGESSIEIDGRIHTFVAEDCAHPEIDAIHAELETLTKEMKEAGYTPDMRFVLHDVDDVQ 792

Query: 709 KELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDAN 768
           KE  +  HSEKLAIA+GL+ T  GT IRI+KNLRVC DCHTATKFISK+  R IV RDAN
Sbjct: 793 KEKALCHHSEKLAIAYGLLKTPSGTPIRIMKNLRVCGDCHTATKFISKIRKREIVARDAN 852

Query: 769 RFHHFKGGVCSCGDYW 784
           RFH+F  G CSCGD+W
Sbjct: 853 RFHYFNNGTCSCGDFW 868



 Score =  209 bits (533), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 153/538 (28%), Positives = 249/538 (46%), Gaps = 49/538 (9%)

Query: 100 KNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWV 159
           K   L  ++ TY  V+   +       G ++H      G   D+++G +L++ Y KF  V
Sbjct: 48  KQRGLLVNSNTYGCVIEHCAKARRFEDGKMVHKQLDELGVEIDIYLGNSLINFYSKFEDV 107

Query: 160 KSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPA 219
            SA +VF +M  +D V W+SMI+    N     +   F  M  +     +  +  ++L A
Sbjct: 108 ASAEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMT-DANIEPNRITFLSILKA 166

Query: 220 VAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISC 279
                 L  G +I  +   +G    V V T L++ YSKCGE+  A  +F  +   +++S 
Sbjct: 167 CNNYSILEKGRKIHTIVKAMGMETDVAVATALITMYSKCGEISVACEVFHKMTERNVVSW 226

Query: 280 NAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLK 339
            A+I     + K   +  L+ Q+L +    N+ T V L+        L+    IHS   +
Sbjct: 227 TAIIQANAQHRKLNEAFELYEQMLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISE 286

Query: 340 SGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLT-----E 394
            G+ ++  V  AL T+Y + N ++ AR++FD  S++ + SW+AMIAGY Q+G       +
Sbjct: 287 RGLETDMIVANALITMYCKCNSVQEAREIFDRMSKRDVISWSAMIAGYAQSGYKDKESID 346

Query: 395 EAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALI 454
           E   L + M+   V PN VT  SIL AC   GA+  G+ +H  +    FE +  + TA+ 
Sbjct: 347 EVFQLLERMRREGVFPNKVTFMSILRACTAHGALEQGRQIHAELSKVGFELDRSLQTAIF 406

Query: 455 DMYAKCGNIVEARELFDLMSHK-------------------------SE------VTWNT 483
           +MYAKCG+I EA ++F  M++K                         SE      V+WN 
Sbjct: 407 NMYAKCGSIYEAEQVFSKMANKNVVAWTSFLSMYIKCGDLSSAEKVFSEMPTRNVVSWNL 466

Query: 484 MISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYAC-SHAGLVREGDEIFQSMIHD 542
           MI+GY  +G  ++  +L S M   G +P  VT +++L AC + AGL R        ++H 
Sbjct: 467 MIAGYAQNGDIVKVFELLSSMKAEGFQPDRVTVITILEACGALAGLER------GKLVHA 520

Query: 543 HGFKPLAEH----YACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKD 596
              K   E        ++ +  + GQ+ +A      ++     A W A+L     H D
Sbjct: 521 EAVKLGLESDTVVATSLIGMYSKCGQVAEARTVFDKMSNRDTVA-WNAMLAGYGQHGD 577



 Score =  189 bits (479), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 118/432 (27%), Positives = 224/432 (51%), Gaps = 13/432 (3%)

Query: 190 FQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLT 249
            +++I + G +++  G  ++S +   V+   A+ +    G  +     +LG    +Y+  
Sbjct: 37  LREAIQLLG-IIKQRGLLVNSNTYGCVIEHCAKARRFEDGKMVHKQLDELGVEIDIYLGN 95

Query: 250 GLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERV 309
            L++FYSK  +V  AE +FR +   D+++ ++MI+ Y  N     +   F ++  +    
Sbjct: 96  SLINFYSKFEDVASAEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMTDANIEP 155

Query: 310 NSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLF 369
           N  T + ++     +  L     IH+     G+ ++ +V TAL T+YS+  E+  A ++F
Sbjct: 156 NRITFLSILKACNNYSILEKGRKIHTIVKAMGMETDVAVATALITMYSKCGEISVACEVF 215

Query: 370 DESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAIS 429
            + +E+++ SW A+I    Q+    EA  L+++M  + ++PN VT  S+L++C    A++
Sbjct: 216 HKMTERNVVSWTAIIQANAQHRKLNEAFELYEQMLQAGISPNAVTFVSLLNSCNTPEALN 275

Query: 430 LGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYG 489
            G+ +H  +  R  E+++ V+ ALI MY KC ++ EARE+FD MS +  ++W+ MI+GY 
Sbjct: 276 RGRRIHSHISERGLETDMIVANALITMYCKCNSVQEAREIFDRMSKRDVISWSAMIAGYA 335

Query: 490 LHGHG-----LEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHG 544
             G+       E  QL   M   G+ P+ VTF+S+L AC+  G + +G +I  + +   G
Sbjct: 336 QSGYKDKESIDEVFQLLERMRREGVFPNKVTFMSILRACTAHGALEQGRQI-HAELSKVG 394

Query: 545 FKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVAS 604
           F+        + ++  + G + +A +    +A       W + L   M  K  +L+  ++
Sbjct: 395 FELDRSLQTAIFNMYAKCGSIYEAEQVFSKMA-NKNVVAWTSFLS--MYIKCGDLS--SA 449

Query: 605 EKLF-ELDPENV 615
           EK+F E+   NV
Sbjct: 450 EKVFSEMPTRNV 461



 Score =  180 bits (457), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 138/585 (23%), Positives = 271/585 (46%), Gaps = 55/585 (9%)

Query: 8   SRNLFLSLLKGAKTQSQLTQ---THAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALF 64
           +R  FLS+LK     S L +    H  +   G + D++  T L    S       A  +F
Sbjct: 156 NRITFLSILKACNNYSILEKGRKIHTIVKAMGMETDVAVATALITMYSKCGEISVACEVF 215

Query: 65  FSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDR 124
             + + ++  +  II+  + +     +   Y  + +   ++P+  T+  +L++ +     
Sbjct: 216 HKMTERNVVSWTAIIQANAQHRKLNEAFELYEQMLQ-AGISPNAVTFVSLLNSCNTPEAL 274

Query: 125 SIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGL 184
           + G  +H H    G  +D+ V  AL+ +Y K + V+ AR++FD+M ++D + W++MI+G 
Sbjct: 275 NRGRRIHSHISERGLETDMIVANALITMYCKCNSVQEAREIFDRMSKRDVISWSAMIAGY 334

Query: 185 ----MKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLG 240
                K+    D ++   + +R  G + +  +  ++L A      L  G +I     K+G
Sbjct: 335 AQSGYKDKESIDEVFQLLERMRREGVFPNKVTFMSILRACTAHGALEQGRQIHAELSKVG 394

Query: 241 F-------------------------------HDHVYVLTGLVSFYSKCGEVERAELLFR 269
           F                               + +V   T  +S Y KCG++  AE +F 
Sbjct: 395 FELDRSLQTAIFNMYAKCGSIYEAEQVFSKMANKNVVAWTSFLSMYIKCGDLSSAEKVFS 454

Query: 270 DIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHL 329
           ++   +++S N MI+GY  NG       L   + A   + +  T++ ++        L  
Sbjct: 455 EMPTRNVVSWNLMIAGYAQNGDIVKVFELLSSMKAEGFQPDRVTVITILEACGALAGLER 514

Query: 330 TNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQ 389
              +H+  +K G+ S++ V T+L  +YS+  ++  AR +FD+ S +   +WNAM+AGY Q
Sbjct: 515 GKLVHAEAVKLGLESDTVVATSLIGMYSKCGQVAEARTVFDKMSNRDTVAWNAMLAGYGQ 574

Query: 390 NGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYV 449
           +G   EA+ LF+ M   +V+PN +T+++++SAC++ G +  G+ +  +++  +F+     
Sbjct: 575 HGDGLEAVDLFKRMLKERVSPNEITLTAVISACSRAGLVQEGREIFRMMQE-DFKMTPRK 633

Query: 450 S--TALIDMYAKCGNIVEARELFDLMSHKSEVT-WNTMISGYGLHGHGLEALQLFSEMLH 506
                ++D+  + G + EA E    M  + +++ W+ ++     H +    +QL     H
Sbjct: 634 QHYGCMVDLLGRAGRLQEAEEFIQSMPCEPDISVWHALLGACKSHNN----VQLAERAAH 689

Query: 507 S--GIRPSGVTF---LSVLYACSHAGLVREGDEIFQSMIHDHGFK 546
               + PS  +    LS +YA   AG   +  ++ + M  D G K
Sbjct: 690 HILELEPSYASVYITLSNIYA--QAGRWDDSTKVRRVM-DDRGLK 731



 Score = 96.7 bits (239), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 61/240 (25%), Positives = 117/240 (48%), Gaps = 4/240 (1%)

Query: 391 GLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVS 450
           G   EAI L   ++   +  N  T   ++  CA+      GK VH+ +     E +IY+ 
Sbjct: 35  GRLREAIQLLGIIKQRGLLVNSNTYGCVIEHCAKARRFEDGKMVHKQLDELGVEIDIYLG 94

Query: 451 TALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIR 510
            +LI+ Y+K  ++  A ++F  M+ +  VTW++MI+ Y  + H  +A   F  M  + I 
Sbjct: 95  NSLINFYSKFEDVASAEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMTDANIE 154

Query: 511 PSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALE 570
           P+ +TFLS+L AC++  ++ +G +I  +++   G +        ++ +  + G++  A E
Sbjct: 155 PNRITFLSILKACNNYSILEKGRKI-HTIVKAMGMETDVAVATALITMYSKCGEISVACE 213

Query: 571 FIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFE--LDPENVGYHVLLSNIYSAE 628
               +  E     W A++ A   H+  N A    E++ +  + P  V +  LL++  + E
Sbjct: 214 VFHKM-TERNVVSWTAIIQANAQHRKLNEAFELYEQMLQAGISPNAVTFVSLLNSCNTPE 272


>gi|224091973|ref|XP_002309422.1| predicted protein [Populus trichocarpa]
 gi|222855398|gb|EEE92945.1| predicted protein [Populus trichocarpa]
          Length = 582

 Score =  494 bits (1273), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 250/560 (44%), Positives = 354/560 (63%), Gaps = 10/560 (1%)

Query: 229 GMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRD--IVRPDLISCNAMISGY 286
           G ++ C   K G     +V T L+S Y KC  ++ A  LF +    R   +  N+++SGY
Sbjct: 29  GKQLHCHVFKTGCLLEPFVQTSLISMYGKCSLIDNARKLFDENPQSRKLTVCYNSLLSGY 88

Query: 287 TCNGKTESSLRLFRQLLASAERVNSSTIVGLI-PVFYPFGHLHLTNCIHSFCLKSGIVSN 345
             N + +  + LF ++      +N  T++GL+ P   P G+L L  C+H FC+K G+  +
Sbjct: 89  ALNSRVKDVVVLFCEMRELGVEINGVTMLGLVQPCGIP-GNLGLGMCVHGFCVKFGLDMD 147

Query: 346 SSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQA 405
           SSV   L T+Y +  E++  RKLFDE   K L +WNAMI GY QNGL    + L++EM++
Sbjct: 148 SSVGNCLLTMYVKSGEIDCGRKLFDEMPRKGLITWNAMINGYAQNGLANNVLELYKEMES 207

Query: 406 SKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVE 465
               P+P+T+  +LS+CA LGA+S+GK V   ++   F SN +++ AL++MYA+CGN+ +
Sbjct: 208 KGFCPDPLTLVGVLSSCAHLGALSVGKEVERKMEGFGFSSNPFLNNALVNMYARCGNLKK 267

Query: 466 ARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSH 525
           AR++FD M  KS V+W  +I GYG+HG G  A+ LF EM+  GI+P G  F+SVL ACSH
Sbjct: 268 ARDIFDGMPVKSVVSWTAIIGGYGMHGQGEVAVGLFDEMIRGGIKPDGTAFVSVLSACSH 327

Query: 526 AGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWG 585
           AGL  +G + F  M   +G +P AEHY+CMVD+LGRAG+L +A E I+ + V    A+WG
Sbjct: 328 AGLTNKGLDYFGVMERKYGLRPGAEHYSCMVDLLGRAGRLNEARELIESMQVRADGALWG 387

Query: 586 ALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRK 645
           ALLGAC IH++  LA +A E++ EL+P N GY+VLLSN+Y+   +      VR +++KRK
Sbjct: 388 ALLGACKIHRNVELAELAFEQVIELEPTNTGYYVLLSNVYTEAGNLEGILRVRMLMRKRK 447

Query: 646 LAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVE 705
           L K PGC+ +E  G  H+F +GD+ HPQ+  IY  L +L   +++     +     +D E
Sbjct: 448 LKKDPGCSYVEFKGRVHLFFAGDRNHPQTNEIYKKLNELENLVKDLDGCKK-----NDHE 502

Query: 706 EEEKEL-MMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVV 764
             E+ L  M VHSEKLA+AF L+ T   TEI IIKNLR+C DCH   K +SK+  R  VV
Sbjct: 503 RREEYLNSMGVHSEKLAVAFALLNTRKETEIIIIKNLRICGDCHLFIKLVSKIVDRQFVV 562

Query: 765 RDANRFHHFKGGVCSCGDYW 784
           RDA RFHHFK G CSC +YW
Sbjct: 563 RDATRFHHFKNGFCSCKEYW 582



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 111/394 (28%), Positives = 194/394 (49%), Gaps = 5/394 (1%)

Query: 102 TALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKS 161
           +  +P+ FT+ F + + +A      G  LH H   +G   + FV  +L+ +Y K S + +
Sbjct: 4   SGASPNAFTFPFAIKSCAALSLPITGKQLHCHVFKTGCLLEPFVQTSLISMYGKCSLIDN 63

Query: 162 ARKVFDKMPE--KDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPA 219
           ARK+FD+ P+  K TV +NS++SG   N   +D + +F +M R  G  ++  ++  ++  
Sbjct: 64  ARKLFDENPQSRKLTVCYNSLLSGYALNSRVKDVVVLFCEM-RELGVEINGVTMLGLVQP 122

Query: 220 VAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISC 279
                 L LGM +    +K G      V   L++ Y K GE++    LF ++ R  LI+ 
Sbjct: 123 CGIPGNLGLGMCVHGFCVKFGLDMDSSVGNCLLTMYVKSGEIDCGRKLFDEMPRKGLITW 182

Query: 280 NAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLK 339
           NAMI+GY  NG   + L L++++ +     +  T+VG++      G L +   +      
Sbjct: 183 NAMINGYAQNGLANNVLELYKEMESKGFCPDPLTLVGVLSSCAHLGALSVGKEVERKMEG 242

Query: 340 SGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISL 399
            G  SN  +  AL  +Y+R   ++ AR +FD    KS+ SW A+I GY  +G  E A+ L
Sbjct: 243 FGFSSNPFLNNALVNMYARCGNLKKARDIFDGMPVKSVVSWTAIIGGYGMHGQGEVAVGL 302

Query: 400 FQEMQASKVAPNPVTVSSILSACAQLGAISLG-KWVHELVKSRNFESNIYVSTALIDMYA 458
           F EM    + P+     S+LSAC+  G  + G  +   + +           + ++D+  
Sbjct: 303 FDEMIRGGIKPDGTAFVSVLSACSHAGLTNKGLDYFGVMERKYGLRPGAEHYSCMVDLLG 362

Query: 459 KCGNIVEARELFDLMSHKSE-VTWNTMISGYGLH 491
           + G + EAREL + M  +++   W  ++    +H
Sbjct: 363 RAGRLNEARELIESMQVRADGALWGALLGACKIH 396



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 76/333 (22%), Positives = 156/333 (46%), Gaps = 12/333 (3%)

Query: 60  ARALFFSIPKPDLF--LFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSA 117
           AR LF   P+       +N ++ G++ N   K  +  +  +R+   +  +  T   ++  
Sbjct: 64  ARKLFDENPQSRKLTVCYNSLLSGYALNSRVKDVVVLFCEMRE-LGVEINGVTMLGLVQP 122

Query: 118 ASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLW 177
                +  +G+ +HG  +  G   D  VG  L+ +Y K   +   RK+FD+MP K  + W
Sbjct: 123 CGIPGNLGLGMCVHGFCVKFGLDMDSSVGNCLLTMYVKSGEIDCGRKLFDEMPRKGLITW 182

Query: 178 NSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGL 237
           N+MI+G  +N    + + ++ +M  + G   D  ++  VL + A +  L +G E++    
Sbjct: 183 NAMINGYAQNGLANNVLELYKEM-ESKGFCPDPLTLVGVLSSCAHLGALSVGKEVERKME 241

Query: 238 KLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLR 297
             GF  + ++   LV+ Y++CG +++A  +F  +    ++S  A+I GY  +G+ E ++ 
Sbjct: 242 GFGFSSNPFLNNALVNMYARCGNLKKARDIFDGMPVKSVVSWTAIIGGYGMHGQGEVAVG 301

Query: 298 LFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTN-CIHSFCL---KSGIVSNSSVLTALS 353
           LF +++    + + +  V    V     H  LTN  +  F +   K G+   +   + + 
Sbjct: 302 LFDEMIRGGIKPDGTAFV---SVLSACSHAGLTNKGLDYFGVMERKYGLRPGAEHYSCMV 358

Query: 354 TVYSRLNEMEAARKLFDESSEKSLAS-WNAMIA 385
            +  R   +  AR+L +    ++  + W A++ 
Sbjct: 359 DLLGRAGRLNEARELIESMQVRADGALWGALLG 391



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 45/127 (35%), Positives = 63/127 (49%), Gaps = 2/127 (1%)

Query: 403 MQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGN 462
           M  S  +PN  T    + +CA L     GK +H  V         +V T+LI MY KC  
Sbjct: 1   MLRSGASPNAFTFPFAIKSCAALSLPITGKQLHCHVFKTGCLLEPFVQTSLISMYGKCSL 60

Query: 463 IVEARELFD--LMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVL 520
           I  AR+LFD    S K  V +N+++SGY L+    + + LF EM   G+  +GVT L ++
Sbjct: 61  IDNARKLFDENPQSRKLTVCYNSLLSGYALNSRVKDVVVLFCEMRELGVEINGVTMLGLV 120

Query: 521 YACSHAG 527
             C   G
Sbjct: 121 QPCGIPG 127


>gi|302760843|ref|XP_002963844.1| hypothetical protein SELMODRAFT_80662 [Selaginella moellendorffii]
 gi|300169112|gb|EFJ35715.1| hypothetical protein SELMODRAFT_80662 [Selaginella moellendorffii]
          Length = 781

 Score =  494 bits (1272), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 269/778 (34%), Positives = 428/778 (55%), Gaps = 6/778 (0%)

Query: 11  LFLSLLK---GAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSI 67
            F++LL+    AK      + H  +   GF+ +      L    +   +   A+ +F  +
Sbjct: 6   FFVALLQRCSSAKNVDHGRRVHWHVRDRGFEQNNLVCGHLIQMYAQCGSVPEAQQVFEIL 65

Query: 68  PKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIG 127
            + D+F +  +I  +        ++  +  +++   + P   TY  +L+A ++      G
Sbjct: 66  ERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVM-PTKVTYVAILNACASTESLKDG 124

Query: 128 VLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKN 187
           + +HG  +  G+  D+FVG AL+++Y K   V+ A   F ++  +D V W +MI+  +++
Sbjct: 125 MEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIAACVQH 184

Query: 188 CCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYV 247
             F  + W++  M  +G    +  ++  V  A  +   L  G  +  L         V V
Sbjct: 185 DQFALARWLYRRMQLDGVV-PNKITLYTVFNAYGDPNYLSEGKFVYGLVSSGVMESDVRV 243

Query: 248 LTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAE 307
           +   V+ +   G +  A  LF D+V  D+++ N +I+ Y  N     ++RLF +L     
Sbjct: 244 MNSAVNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITLYVQNENFGEAVRLFGRLQQDGV 303

Query: 308 RVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARK 367
           + N  T V ++ V+     L     IH    ++G   ++ V TAL ++Y R      A K
Sbjct: 304 KANDITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDAVVATALMSLYGRCEAPGQAWK 363

Query: 368 LFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGA 427
           +F +   K + +W  M   Y QNG  +EA+ LFQEMQ     P   T+ ++L  CA L A
Sbjct: 364 IFVDMGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSATLVAVLDTCAHLAA 423

Query: 428 ISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISG 487
           +  G+ +H  +    F   + V TALI+MY KCG + EA  +F+ M+ +  + WN+M+  
Sbjct: 424 LQKGRQIHSHIIENRFRMEMVVETALINMYGKCGKMAEAMSVFEKMAKRDILVWNSMLGA 483

Query: 488 YGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKP 547
           Y  HG+  E LQLF++M   G++   V+F+SVL A SH+G V +G + F +M+ D    P
Sbjct: 484 YAQHGYYDETLQLFNQMQLDGVKADAVSFVSVLSALSHSGSVTDGYQYFVAMLQDFSITP 543

Query: 548 LAEHYACMVDILGRAGQLEKALEFIKGLA-VEPGPAVWGALLGACMIHKDTNLARVASEK 606
             E Y C+VD+LGRAG++++A++ +  L+   P   +W  LLGAC  H  T+ A+ A+E+
Sbjct: 544 TPELYGCVVDLLGRAGRIQEAVDIVLKLSGCLPDGILWMTLLGACRTHNKTDQAKAAAEQ 603

Query: 607 LFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTS 666
           + E DP + G +V+LSN+Y+A  D+     +R++++ R + K PG + IE+    H F  
Sbjct: 604 VLERDPSHSGAYVVLSNVYAAAGDWDGVNRMRKLMRSRGVKKEPGRSSIEILNRVHEFLE 663

Query: 667 GDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGL 726
           GD+ HP+   IYA L+ LN +MR AG+  +T   LHDVE+E KE M+  HSE+LAIAFGL
Sbjct: 664 GDRSHPRRHPIYAELDVLNSEMRAAGYIPDTKMILHDVEDERKEDMLFYHSERLAIAFGL 723

Query: 727 IATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           I+T PGT +R+IKNLRVC DCHTATK+ISK+ GR I+VRD +RFH+FK G CSC DYW
Sbjct: 724 ISTPPGTPLRVIKNLRVCSDCHTATKYISKLRGREILVRDTHRFHNFKDGRCSCKDYW 781



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 131/489 (26%), Positives = 236/489 (48%), Gaps = 3/489 (0%)

Query: 106 PDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKV 165
           PD   +  +L   S+  +   G  +H H    G+  +  V   L+ +Y +   V  A++V
Sbjct: 2   PDTAFFVALLQRCSSAKNVDHGRRVHWHVRDRGFEQNNLVCGHLIQMYAQCGSVPEAQQV 61

Query: 166 FDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQE 225
           F+ +  KD   W  MI    +   +  ++ +F  M          T V A+L A A  + 
Sbjct: 62  FEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYV-AILNACASTES 120

Query: 226 LRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISG 285
           L+ GMEI    L+ GF   V+V T L++ Y+KCG V  A   F+ +   D++S  AMI+ 
Sbjct: 121 LKDGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIAA 180

Query: 286 YTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSN 345
              + +   +  L+R++       N  T+  +   +    +L     ++       + S+
Sbjct: 181 CVQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPNYLSEGKFVYGLVSSGVMESD 240

Query: 346 SSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQA 405
             V+ +   ++     +  AR+LF++  ++ + +WN +I  Y QN    EA+ LF  +Q 
Sbjct: 241 VRVMNSAVNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITLYVQNENFGEAVRLFGRLQQ 300

Query: 406 SKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVE 465
             V  N +T   +L+    L +++ GK +HELVK   ++ +  V+TAL+ +Y +C    +
Sbjct: 301 DGVKANDITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDAVVATALMSLYGRCEAPGQ 360

Query: 466 ARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSH 525
           A ++F  M  K  +TW  M   Y  +G   EALQLF EM   G RP+  T ++VL  C+H
Sbjct: 361 AWKIFVDMGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSATLVAVLDTCAH 420

Query: 526 AGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWG 585
              +++G +I   +I +  F+        ++++ G+ G++ +A+   + +A +    VW 
Sbjct: 421 LAALQKGRQIHSHIIENR-FRMEMVVETALINMYGKCGKMAEAMSVFEKMA-KRDILVWN 478

Query: 586 ALLGACMIH 594
           ++LGA   H
Sbjct: 479 SMLGAYAQH 487



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 56/192 (29%), Positives = 95/192 (49%), Gaps = 2/192 (1%)

Query: 410 PNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEAREL 469
           P+     ++L  C+    +  G+ VH  V+ R FE N  V   LI MYA+CG++ EA+++
Sbjct: 2   PDTAFFVALLQRCSSAKNVDHGRRVHWHVRDRGFEQNNLVCGHLIQMYAQCGSVPEAQQV 61

Query: 470 FDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLV 529
           F+++  K    W  MI  Y   G    AL +F +M    + P+ VT++++L AC+    +
Sbjct: 62  FEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTESL 121

Query: 530 REGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLG 589
           ++G EI    I   GF+        ++++  + G +  A +  K L        W A++ 
Sbjct: 122 KDGMEI-HGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLE-HRDVVSWTAMIA 179

Query: 590 ACMIHKDTNLAR 601
           AC+ H    LAR
Sbjct: 180 ACVQHDQFALAR 191


>gi|359482115|ref|XP_003632713.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Vitis vinifera]
          Length = 989

 Score =  494 bits (1272), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 273/758 (36%), Positives = 416/758 (54%), Gaps = 2/758 (0%)

Query: 27  QTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNE 86
           Q H  I+  G  ++      L    S +     A  +F  + + D   +N +I G +   
Sbjct: 234 QLHGFIVKWGLSSETFVCNALVTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRG 293

Query: 87  MPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVG 146
               ++  +  ++ +  + PD  T + +LSA ++      G  LH + I  G  SDL + 
Sbjct: 294 FSDRALQLFEKMQLD-CMKPDCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIE 352

Query: 147 AALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGT 206
            +L+DLY K   +++A + F     ++ VLWN M+    +     +S W+F  M +  G 
Sbjct: 353 GSLLDLYVKCFDIETAHEYFLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQM-QIEGL 411

Query: 207 WLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAEL 266
             +  +  ++L     +  L LG +I    +K GF  +VYV + L+  Y+K GE++ A  
Sbjct: 412 MPNQYTYPSILRTCTSLGALDLGEQIHTQVIKSGFQFNVYVCSVLIDMYAKHGELDTARG 471

Query: 267 LFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGH 326
           + + +   D++S  AMI+GYT +     +L+LF+++     R ++      I        
Sbjct: 472 ILQRLREEDVVSWTAMIAGYTQHDLFAEALKLFQEMENQGIRSDNIGFSSAISACAGIQA 531

Query: 327 LHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAG 386
           L+    IH+    SG   + S+  AL ++Y+R    + A   F++   K   SWNA+I+G
Sbjct: 532 LNQGQQIHAQSYISGYSEDLSIGNALVSLYARCGRAQDAYLAFEKIDAKDNISWNALISG 591

Query: 387 YTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESN 446
           + Q+G  EEA+ +F +M  + V  N  T  S +SA A    I  GK +H ++    ++S 
Sbjct: 592 FAQSGHCEEALQVFSQMNQAGVEANLFTFGSAVSATANTANIKQGKQIHAMMIKTGYDSE 651

Query: 447 IYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLH 506
              S  LI +Y+KCG+I +A+  F  M  K+ V+WN MI+GY  HG+G EA+ LF EM  
Sbjct: 652 TEASNVLITLYSKCGSIEDAKREFFEMPEKNVVSWNAMITGYSQHGYGSEAVSLFEEMKQ 711

Query: 507 SGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLE 566
            G+ P+ VTF+ VL ACSH GLV EG   F+SM  +HG  P  EHY C+VD+LGRA  L 
Sbjct: 712 LGLMPNHVTFVGVLSACSHVGLVNEGLSYFRSMSKEHGLVPKPEHYVCVVDLLGRAALLC 771

Query: 567 KALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYS 626
            A EFI+ + +EP   +W  LL AC +HK+  +   A+  L EL+PE+   +VLLSN+Y+
Sbjct: 772 CAREFIEEMPIEPDAMIWRTLLSACTVHKNIEIGEFAARHLLELEPEDSATYVLLSNMYA 831

Query: 627 AERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNG 686
               +      RQ++K R + K PG + IEV  + H F  GD+LHP +  IY  ++ LN 
Sbjct: 832 VSGKWDYRDRTRQMMKDRGVKKEPGRSWIEVKNSIHAFFVGDRLHPLAEQIYEYIDDLNE 891

Query: 687 KMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLD 746
           +  E G+  +    L+DVE+E+K+    +HSEKLA+AFGL++      IR+IKNLRVC D
Sbjct: 892 RAGEIGYVQDRYNLLNDVEQEQKDPTAYIHSEKLAVAFGLLSLTNTMPIRVIKNLRVCND 951

Query: 747 CHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           CH   KF+SK++ R IVVRDA RFHHF+GGVCSC DYW
Sbjct: 952 CHNWIKFVSKISNRAIVVRDAYRFHHFEGGVCSCKDYW 989



 Score =  235 bits (600), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 168/582 (28%), Positives = 282/582 (48%), Gaps = 10/582 (1%)

Query: 12  FLSLLKGAKTQSQL---TQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIP 68
           +L L +G      L    + HA+I   GF  +    ++L            A  LF  IP
Sbjct: 13  YLWLFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGEVDNAIKLFDDIP 72

Query: 69  KPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASAC-CDRSIG 127
             ++  +N +I G    ++    +  ++ L     +TPD  T++ VL A S       + 
Sbjct: 73  SSNVSFWNKVISGLLAKKLASQVLGLFS-LMITENVTPDESTFASVLRACSGGKAPFQVT 131

Query: 128 VLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKN 187
             +H   I  G+GS   V   L+DLY K   V  A+ VF+++  KD+V W +MISGL +N
Sbjct: 132 EQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSVSWVAMISGLSQN 191

Query: 188 CCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYV 247
               ++I +F  M ++          ++VL A  +++  +LG ++    +K G     +V
Sbjct: 192 GREDEAILLFCQMHKSA-VIPTPYVFSSVLSACTKIELFKLGEQLHGFIVKWGLSSETFV 250

Query: 248 LTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAE 307
              LV+ YS+ G +  AE +F  + R D IS N++ISG    G ++ +L+LF ++     
Sbjct: 251 CNALVTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRGFSDRALQLFEKMQLDCM 310

Query: 308 RVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARK 367
           + +  T+  L+      G  +    +HS+ +K G+ S+  +  +L  +Y +  ++E A +
Sbjct: 311 KPDCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDLYVKCFDIETAHE 370

Query: 368 LFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGA 427
            F  +  +++  WN M+  Y Q G   E+  +F +MQ   + PN  T  SIL  C  LGA
Sbjct: 371 YFLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTYPSILRTCTSLGA 430

Query: 428 ISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISG 487
           + LG+ +H  V    F+ N+YV + LIDMYAK G +  AR +   +  +  V+W  MI+G
Sbjct: 431 LDLGEQIHTQVIKSGFQFNVYVCSVLIDMYAKHGELDTARGILQRLREEDVVSWTAMIAG 490

Query: 488 YGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIF-QSMIHDHGFK 546
           Y  H    EAL+LF EM + GIR   + F S + AC+    + +G +I  QS I   G+ 
Sbjct: 491 YTQHDLFAEALKLFQEMENQGIRSDNIGFSSAISACAGIQALNQGQQIHAQSYI--SGYS 548

Query: 547 PLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALL 588
                   +V +  R G+ + A    + +  +   + W AL+
Sbjct: 549 EDLSIGNALVSLYARCGRAQDAYLAFEKIDAKDNIS-WNALI 589



 Score =  106 bits (264), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 72/239 (30%), Positives = 117/239 (48%), Gaps = 8/239 (3%)

Query: 308 RVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARK 367
           R N  T + L    +  G L     +H+   KSG      + + L  +Y    E++ A K
Sbjct: 7   RANVQTYLWLFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGEVDNAIK 66

Query: 368 LFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGA 427
           LFD+    +++ WN +I+G     L  + + LF  M    V P+  T +S+L AC+   A
Sbjct: 67  LFDDIPSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRACSGGKA 126

Query: 428 -ISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMIS 486
              + + +H  +    F S+  V   LID+Y+K G++  A+ +F+ +  K  V+W  MIS
Sbjct: 127 PFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSVSWVAMIS 186

Query: 487 GYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGF 545
           G   +G   EA+ LF +M  S + P+   F SVL AC+   L + G+++       HGF
Sbjct: 187 GLSQNGREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQL-------HGF 238



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 56/223 (25%), Positives = 89/223 (39%), Gaps = 34/223 (15%)

Query: 403 MQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGN 462
           M+   +  N  T   +   C   G++   K +H  +    F+    + + LID+Y   G 
Sbjct: 1   MEERGIRANVQTYLWLFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGE 60

Query: 463 IVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYA 522
           +  A +LFD +   +   WN +ISG        + L LFS M+   + P   TF SVL A
Sbjct: 61  VDNAIKLFDDIPSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRA 120

Query: 523 CSHAGLVREGDEIFQSMIHDHGF-------KPLAEHYA---------------------- 553
           CS      +  E   + I  HGF        PL + Y+                      
Sbjct: 121 CSGGKAPFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSVS 180

Query: 554 --CMVDILGRAGQLEKALEFIKGL---AVEPGPAVWGALLGAC 591
              M+  L + G+ ++A+     +   AV P P V+ ++L AC
Sbjct: 181 WVAMISGLSQNGREDEAILLFCQMHKSAVIPTPYVFSSVLSAC 223


>gi|357149883|ref|XP_003575265.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Brachypodium distachyon]
          Length = 877

 Score =  494 bits (1271), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 276/771 (35%), Positives = 422/771 (54%), Gaps = 3/771 (0%)

Query: 15  LLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIP-KPDLF 73
           +LK A      TQ HA  +  G   D+     L      F     AR +F     + +  
Sbjct: 109 VLKCAPDAGFGTQLHALAMATGLGGDIFVANALVAMYGGFGFVDEARMVFDEAGCERNTV 168

Query: 74  LFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGH 133
            +N ++  +  N+    ++  +  +     + P+ F +S V++A +   D   G  +H  
Sbjct: 169 SWNGLMSAYVKNDRCSHAVKVFGEMVWG-GVQPNEFGFSCVVNACTGSRDLEAGRKVHAM 227

Query: 134 AIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDS 193
            I +GY  D+F   ALVD+Y K   ++ A  VF K+PE D V WN+ ISG + +   Q +
Sbjct: 228 VIRTGYDKDVFTANALVDMYSKLGDIRMAAVVFGKVPETDVVSWNAFISGCVLHGHDQHA 287

Query: 194 IWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVS 253
           + +   M ++ G   +  +++++L A A      LG +I    +K       Y+  GLV 
Sbjct: 288 LELLLQM-KSSGLVPNVFTLSSILKACAGSGAFNLGRQIHGFMVKANADSDNYIAFGLVD 346

Query: 254 FYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSST 313
            Y+K G ++ A+ +F  I + DL+  NA+ISG +   +   +L LF ++      VN +T
Sbjct: 347 MYAKHGLLDDAKKVFDWIPQRDLVLWNALISGCSHGAQHAEALSLFCRMRKEGFDVNRTT 406

Query: 314 IVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESS 373
           +  ++        +  T  +H+   K G +S+S V+  L   Y + + +  A ++F++  
Sbjct: 407 LAAVLKSTASLEAISDTRQVHALAEKLGFLSDSHVVNGLIDSYWKCDCLNYAYRVFEKHG 466

Query: 374 EKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKW 433
              + ++ +MI   +Q    E+AI LF EM    + P+P  +SS+L+ACA L A   GK 
Sbjct: 467 SYDIIAFTSMITALSQCDHGEDAIKLFMEMLRKGLDPDPFVLSSLLNACASLSAYEQGKQ 526

Query: 434 VHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGH 493
           VH  +  R F S+++   AL+  YAKCG+I +A   F  +  K  V+W+ MI G   HGH
Sbjct: 527 VHAHLIKRQFMSDVFAGNALVYTYAKCGSIEDADLAFSGLPEKGVVSWSAMIGGLAQHGH 586

Query: 494 GLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYA 553
           G  AL +F  M+   I P+ +T  SVL AC+HAGLV E    F SM    G +   EHYA
Sbjct: 587 GKRALDVFHRMVDEHISPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIERTEEHYA 646

Query: 554 CMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPE 613
           CM+D+LGRAG+L+ A+E +  +  +   AVWGALL A  +H+D  L R+A+EKLF L+PE
Sbjct: 647 CMIDLLGRAGKLDDAMELVNSMPFQTNAAVWGALLAASRVHRDPELGRLAAEKLFILEPE 706

Query: 614 NVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQ 673
             G HVLL+N Y++   +   A VR+++K  K+ K P  + +E+    H F  GD+ HP+
Sbjct: 707 KSGTHVLLANTYASAGMWDDVAKVRKLMKDSKVKKEPAMSWVELKDKVHTFIVGDKSHPR 766

Query: 674 STAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGT 733
           +  IYA L++L   M +AG+       LHDV++ EKEL++  HSE+LA+AF LI+T  G 
Sbjct: 767 ARDIYAKLDELGDLMTKAGYVPNVEVDLHDVDKNEKELLLSHHSERLAVAFALISTPAGA 826

Query: 734 EIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
            IR+ KNLR+C DCH A KFIS +  R I++RD NRFHHF+ G CSC DYW
Sbjct: 827 PIRVKKNLRICRDCHAAFKFISDIVSREIIIRDINRFHHFRDGACSCRDYW 877



 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 172/585 (29%), Positives = 286/585 (48%), Gaps = 16/585 (2%)

Query: 15  LLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCY----ARALFFSIPKP 70
           L + A TQS L   H  I  H  ++ L  V +  + L  F + C     AR +F  IP P
Sbjct: 11  LTRYAATQSLLQGAH--IHAHLLKSGLFAVFR--NHLLSFYSKCRLPGSARRVFDEIPDP 66

Query: 71  DLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLL 130
               ++ ++  +SNN MP+ ++  +  +R + ++  + F    VL  A    D   G  L
Sbjct: 67  CHVSWSSLVTAYSNNAMPRDALGAFRSMR-SCSVRCNEFVLPVVLKCAP---DAGFGTQL 122

Query: 131 HGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMP-EKDTVLWNSMISGLMKNCC 189
           H  A+ +G G D+FV  ALV +Y  F +V  AR VFD+   E++TV WN ++S  +KN  
Sbjct: 123 HALAMATGLGGDIFVANALVAMYGGFGFVDEARMVFDEAGCERNTVSWNGLMSAYVKNDR 182

Query: 190 FQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLT 249
              ++ VFG+MV  GG   +    + V+ A    ++L  G ++  + ++ G+   V+   
Sbjct: 183 CSHAVKVFGEMVW-GGVQPNEFGFSCVVNACTGSRDLEAGRKVHAMVIRTGYDKDVFTAN 241

Query: 250 GLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERV 309
            LV  YSK G++  A ++F  +   D++S NA ISG   +G  + +L L  Q+ +S    
Sbjct: 242 ALVDMYSKLGDIRMAAVVFGKVPETDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVP 301

Query: 310 NSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLF 369
           N  T+  ++      G  +L   IH F +K+   S++ +   L  +Y++   ++ A+K+F
Sbjct: 302 NVFTLSSILKACAGSGAFNLGRQIHGFMVKANADSDNYIAFGLVDMYAKHGLLDDAKKVF 361

Query: 370 DESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAIS 429
           D   ++ L  WNA+I+G +      EA+SLF  M+      N  T++++L + A L AIS
Sbjct: 362 DWIPQRDLVLWNALISGCSHGAQHAEALSLFCRMRKEGFDVNRTTLAAVLKSTASLEAIS 421

Query: 430 LGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYG 489
             + VH L +   F S+ +V   LID Y KC  +  A  +F+       + + +MI+   
Sbjct: 422 DTRQVHALAEKLGFLSDSHVVNGLIDSYWKCDCLNYAYRVFEKHGSYDIIAFTSMITALS 481

Query: 490 LHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLA 549
              HG +A++LF EML  G+ P      S+L AC+      +G ++   +I       + 
Sbjct: 482 QCDHGEDAIKLFMEMLRKGLDPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDVF 541

Query: 550 EHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIH 594
              A +V    + G +E A     GL  E G   W A++G    H
Sbjct: 542 AGNA-LVYTYAKCGSIEDADLAFSGLP-EKGVVSWSAMIGGLAQH 584



 Score =  159 bits (402), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 111/391 (28%), Positives = 188/391 (48%), Gaps = 28/391 (7%)

Query: 212 SVAAVLPAVAEVQELRLGMEIQCLGLKLG----FHDHVYVLTGLVSFYSKCGEVERAELL 267
           ++  +L   A  Q L  G  I    LK G    F +H      L+SFYSKC     A  +
Sbjct: 6   TIGPLLTRYAATQSLLQGAHIHAHLLKSGLFAVFRNH------LLSFYSKCRLPGSARRV 59

Query: 268 FRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHL 327
           F +I  P  +S +++++ Y+ N     +L  FR + + + R N   +  ++      G  
Sbjct: 60  FDEIPDPCHVSWSSLVTAYSNNAMPRDALGAFRSMRSCSVRCNEFVLPVVLKCAPDAG-- 117

Query: 328 HLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESS-EKSLASWNAMIAG 386
                +H+  + +G+  +  V  AL  +Y     ++ AR +FDE+  E++  SWN +++ 
Sbjct: 118 -FGTQLHALAMATGLGGDIFVANALVAMYGGFGFVDEARMVFDEAGCERNTVSWNGLMSA 176

Query: 387 YTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESN 446
           Y +N     A+ +F EM    V PN    S +++AC     +  G+ VH +V    ++ +
Sbjct: 177 YVKNDRCSHAVKVFGEMVWGGVQPNEFGFSCVVNACTGSRDLEAGRKVHAMVIRTGYDKD 236

Query: 447 IYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLH 506
           ++ + AL+DMY+K G+I  A  +F  +     V+WN  ISG  LHGH   AL+L  +M  
Sbjct: 237 VFTANALVDMYSKLGDIRMAAVVFGKVPETDVVSWNAFISGCVLHGHDQHALELLLQMKS 296

Query: 507 SGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLA----EHYAC--MVDILG 560
           SG+ P+  T  S+L AC+ +G    G +I       HGF   A    ++Y    +VD+  
Sbjct: 297 SGLVPNVFTLSSILKACAGSGAFNLGRQI-------HGFMVKANADSDNYIAFGLVDMYA 349

Query: 561 RAGQLEKALEFIKGLAVEPGPAVWGALLGAC 591
           + G L+ A +    +  +    +W AL+  C
Sbjct: 350 KHGLLDDAKKVFDWIP-QRDLVLWNALISGC 379


>gi|225447376|ref|XP_002274886.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Vitis vinifera]
          Length = 736

 Score =  494 bits (1271), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 255/660 (38%), Positives = 389/660 (58%), Gaps = 3/660 (0%)

Query: 127 GVLLHGHAI-VSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLM 185
           G  LH H I  S   ++ ++   L   Y     +  A  +FD +  K++ LWN MI G  
Sbjct: 78  GQQLHAHMISFSILENNTYLNTKLAAFYAGCGLMSQAEVIFDGIVLKNSFLWNFMIRGYA 137

Query: 186 KNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHV 245
            N     S+ ++ +M+   G   D+ +   VL A  ++  + +G  +    +  G    +
Sbjct: 138 SNGLPMKSLVLYREML-CFGQRADNFTYPFVLKACGDLLLVEIGRRVHSEVVVCGLESDI 196

Query: 246 YVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLAS 305
           YV   L++ Y+K G++  A ++F  +   DL S N MISGY  N  + ++  +F  +  +
Sbjct: 197 YVGNSLLAMYAKFGDMGTARMVFDRMAERDLTSWNTMISGYAKNADSGTAFLVFDLMGKA 256

Query: 306 AERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLT-ALSTVYSRLNEMEA 364
               + +T++GL+        +     IH + +++ I + +   T +L  +Y   N M  
Sbjct: 257 GLFADCTTLLGLLSACADLKAVKEGKVIHGYAVRNSIGNYNKFFTNSLIEMYCNCNCMVD 316

Query: 365 ARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQ 424
           AR+LF+    K   SWN+MI GY +NG   E++ LF+ M      P+ VT  ++L AC Q
Sbjct: 317 ARRLFERVRWKDTVSWNSMILGYARNGDAFESLRLFRRMALDGSGPDQVTFIAVLGACDQ 376

Query: 425 LGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTM 484
           + A+  G  +H  +  + F++N  V TAL+DMY+KCG++  +R +FD M  KS V+W+ M
Sbjct: 377 IAALRYGMSIHSYLVKKGFDANTIVGTALVDMYSKCGSLACSRRVFDEMPDKSLVSWSAM 436

Query: 485 ISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHG 544
           ++GYGLHG G EA+ +   M  + + P    F S+L ACSHAGLV EG EIF  M  ++ 
Sbjct: 437 VAGYGLHGRGREAISILDGMKANSVIPDNGVFTSILSACSHAGLVVEGKEIFYKMEKEYN 496

Query: 545 FKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVAS 604
            KP   HY+CMVD+LGRAG L++A   I+ + ++P   +W ALL A  +HK+  LA +++
Sbjct: 497 VKPALSHYSCMVDLLGRAGHLDEAYVIIRTMEIKPTSDIWAALLTASRLHKNIKLAEISA 556

Query: 605 EKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVF 664
           +K+F+++P+ V  ++ LSNIY+AE+ +     VR +V+++ L K+PGC+ IE+    H F
Sbjct: 557 QKVFDMNPKVVSSYICLSNIYAAEKRWDDVERVRAMVRRKGLKKSPGCSFIELDNMVHRF 616

Query: 665 TSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAF 724
             GD+ H Q+  IYA L +L  +++EAG++ +T    +DVEEE KE M+  HSE+LAIAF
Sbjct: 617 LVGDKSHQQTEDIYAKLNELKQQLKEAGYKPDTSLVFYDVEEEVKEKMLWDHSERLAIAF 676

Query: 725 GLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
            LI T PGT IRI KNLRVC DCHT TK IS++TGR I++RD +RFHHF  G CSCGDYW
Sbjct: 677 ALINTGPGTVIRITKNLRVCGDCHTVTKLISELTGREIIMRDIHRFHHFIKGFCSCGDYW 736



 Score =  237 bits (605), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 155/487 (31%), Positives = 247/487 (50%), Gaps = 12/487 (2%)

Query: 12  FLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATC----YARALFFSI 67
            L      K+  Q  Q HA +I       L   T L  +L+ F A C     A  +F  I
Sbjct: 65  LLQSFTNTKSFKQGQQLHAHMISFSI---LENNTYLNTKLAAFYAGCGLMSQAEVIFDGI 121

Query: 68  PKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIG 127
              + FL+N +IRG+++N +P  S+  Y  +        DNFTY FVL A        IG
Sbjct: 122 VLKNSFLWNFMIRGYASNGLPMKSLVLYREML-CFGQRADNFTYPFVLKACGDLLLVEIG 180

Query: 128 VLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKN 187
             +H   +V G  SD++VG +L+ +Y KF  + +AR VFD+M E+D   WN+MISG  KN
Sbjct: 181 RRVHSEVVVCGLESDIYVGNSLLAMYAKFGDMGTARMVFDRMAERDLTSWNTMISGYAKN 240

Query: 188 CCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYV 247
                +  VF D++   G + D T++  +L A A+++ ++ G  I    ++    ++   
Sbjct: 241 ADSGTAFLVF-DLMGKAGLFADCTTLLGLLSACADLKAVKEGKVIHGYAVRNSIGNYNKF 299

Query: 248 LTG-LVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASA 306
            T  L+  Y  C  +  A  LF  +   D +S N+MI GY  NG    SLRLFR++    
Sbjct: 300 FTNSLIEMYCNCNCMVDARRLFERVRWKDTVSWNSMILGYARNGDAFESLRLFRRMALDG 359

Query: 307 ERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAAR 366
              +  T + ++        L     IHS+ +K G  +N+ V TAL  +YS+   +  +R
Sbjct: 360 SGPDQVTFIAVLGACDQIAALRYGMSIHSYLVKKGFDANTIVGTALVDMYSKCGSLACSR 419

Query: 367 KLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLG 426
           ++FDE  +KSL SW+AM+AGY  +G   EAIS+   M+A+ V P+    +SILSAC+  G
Sbjct: 420 RVFDEMPDKSLVSWSAMVAGYGLHGRGREAISILDGMKANSVIPDNGVFTSILSACSHAG 479

Query: 427 AISLGKWV-HELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHK-SEVTWNTM 484
            +  GK + +++ K  N +  +   + ++D+  + G++ EA  +   M  K +   W  +
Sbjct: 480 LVVEGKEIFYKMEKEYNVKPALSHYSCMVDLLGRAGHLDEAYVIIRTMEIKPTSDIWAAL 539

Query: 485 ISGYGLH 491
           ++   LH
Sbjct: 540 LTASRLH 546


>gi|302780040|ref|XP_002971795.1| hypothetical protein SELMODRAFT_95653 [Selaginella moellendorffii]
 gi|300160927|gb|EFJ27544.1| hypothetical protein SELMODRAFT_95653 [Selaginella moellendorffii]
          Length = 782

 Score =  494 bits (1271), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 269/778 (34%), Positives = 427/778 (54%), Gaps = 6/778 (0%)

Query: 11  LFLSLLK---GAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSI 67
            F++LL+    AK      + H  +   GF+ +      L    +   +   A+ +F  +
Sbjct: 7   FFVALLQRCSSAKNVDHGRRVHWHVCDRGFEQNNLVCGHLIQMYAQCGSVPEAQQVFEIL 66

Query: 68  PKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIG 127
            + D+F +  +I  +        ++  +  +++   + P   TY  +L+A ++      G
Sbjct: 67  ERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVM-PTKVTYVAILNACASTESLKDG 125

Query: 128 VLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKN 187
           + +HG  +  G+  D+FVG AL+++Y K   V+ A   F ++  +D V W +MI+  +++
Sbjct: 126 MEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIAACVQH 185

Query: 188 CCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYV 247
             F  + W++  M  +G    +  ++  V  A  +   L  G  I  L         V V
Sbjct: 186 DQFALARWLYRRMQLDGVV-PNKITLYTVFNAYGDPHYLSEGKFIYSLVSSRVMESDVRV 244

Query: 248 LTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAE 307
           +   ++ +   G +  A  LF D+V  D+++ N +I+ Y  N     ++RLF +L     
Sbjct: 245 MNSAMNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITFYVQNENFGEAVRLFGRLQQDGI 304

Query: 308 RVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARK 367
           + N  T V ++ V+     L     IH    ++G   +  V TAL ++Y R      A K
Sbjct: 305 KANDITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDVVVATALMSLYGRCEAPGQAWK 364

Query: 368 LFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGA 427
           +F +   K + +W  M   Y QNG  +EA+ LFQEMQ     P   T+ ++L  CA L A
Sbjct: 365 IFVDMGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSATLVAVLDTCAHLAA 424

Query: 428 ISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISG 487
           +  G+ +H  +    F   + V TALI+MY KCG + EAR +F+ M+ +  + WN+M+  
Sbjct: 425 LQKGRQIHSHIIENGFRMEMVVETALINMYGKCGKMAEARSVFEKMAKRDILVWNSMLGA 484

Query: 488 YGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKP 547
           Y  HG+  E LQLF++M   G +   V+F+SVL A SH+G V +G + F +M+ D    P
Sbjct: 485 YAQHGYYDETLQLFNQMQLDGEKADAVSFVSVLSALSHSGSVTDGYQYFVAMLQDFSITP 544

Query: 548 LAEHYACMVDILGRAGQLEKALEFIKGLA-VEPGPAVWGALLGACMIHKDTNLARVASEK 606
             E Y C+VD+LGRAG++++A++ +  L+   P   +W  LLGAC  H  T+ A+ A+E+
Sbjct: 545 TPELYGCVVDLLGRAGRIQEAVDIVLKLSGCLPDGILWMTLLGACRTHNKTDQAKAAAEQ 604

Query: 607 LFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTS 666
           + E DP + G +V+LSN+Y+A  D+     +R++++ R + K PG + IE+    H F  
Sbjct: 605 VLERDPSHSGAYVVLSNVYAAAGDWDGVNRMRKLMRSRGVKKEPGRSSIEILNRVHEFLE 664

Query: 667 GDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGL 726
           GD+ HP+   IYA L+ LN +MR AG+  +T   LHDVE+E KE M+  HSE+LAIAFGL
Sbjct: 665 GDRSHPRRHPIYAELDVLNSEMRAAGYIPDTKMILHDVEDERKEDMLFYHSERLAIAFGL 724

Query: 727 IATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           ++T PGT +R+IKNLRVC DCHTATK+ISK+ GR I+VRD +RFH+FK G CSC DYW
Sbjct: 725 MSTPPGTPLRVIKNLRVCSDCHTATKYISKLRGREILVRDTHRFHNFKDGRCSCKDYW 782



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 138/494 (27%), Positives = 241/494 (48%), Gaps = 9/494 (1%)

Query: 104 LTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSAR 163
             PD   +  +L   S+  +   G  +H H    G+  +  V   L+ +Y +   V  A+
Sbjct: 1   FKPDTAFFVALLQRCSSAKNVDHGRRVHWHVCDRGFEQNNLVCGHLIQMYAQCGSVPEAQ 60

Query: 164 KVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEV 223
           +VF+ +  KD   W  MI    +   +  ++ +F  M          T V A+L A A  
Sbjct: 61  QVFEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYV-AILNACAST 119

Query: 224 QELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMI 283
           + L+ GMEI    L+ GF   V+V T L++ Y+KCG V  A   F+ +   D++S  AMI
Sbjct: 120 ESLKDGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMI 179

Query: 284 SGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTN---CIHSFCLKS 340
           +    + +   +  L+R++       N  T   L  VF  +G  H  +    I+S     
Sbjct: 180 AACVQHDQFALARWLYRRMQLDGVVPNKIT---LYTVFNAYGDPHYLSEGKFIYSLVSSR 236

Query: 341 GIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLF 400
            + S+  V+ +   ++     +  AR+LF++  ++ + +WN +I  Y QN    EA+ LF
Sbjct: 237 VMESDVRVMNSAMNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITFYVQNENFGEAVRLF 296

Query: 401 QEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKC 460
             +Q   +  N +T   +L+    L +++ GK +HELVK   ++ ++ V+TAL+ +Y +C
Sbjct: 297 GRLQQDGIKANDITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDVVVATALMSLYGRC 356

Query: 461 GNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVL 520
               +A ++F  M  K  +TW  M   Y  +G   EALQLF EM   G RP+  T ++VL
Sbjct: 357 EAPGQAWKIFVDMGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSATLVAVL 416

Query: 521 YACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPG 580
             C+H   +++G +I  S I ++GF+        ++++ G+ G++ +A    + +A +  
Sbjct: 417 DTCAHLAALQKGRQI-HSHIIENGFRMEMVVETALINMYGKCGKMAEARSVFEKMA-KRD 474

Query: 581 PAVWGALLGACMIH 594
             VW ++LGA   H
Sbjct: 475 ILVWNSMLGAYAQH 488



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 56/192 (29%), Positives = 94/192 (48%), Gaps = 2/192 (1%)

Query: 410 PNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEAREL 469
           P+     ++L  C+    +  G+ VH  V  R FE N  V   LI MYA+CG++ EA+++
Sbjct: 3   PDTAFFVALLQRCSSAKNVDHGRRVHWHVCDRGFEQNNLVCGHLIQMYAQCGSVPEAQQV 62

Query: 470 FDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLV 529
           F+++  K    W  MI  Y   G    AL +F +M    + P+ VT++++L AC+    +
Sbjct: 63  FEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTESL 122

Query: 530 REGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLG 589
           ++G EI    I   GF+        ++++  + G +  A +  K L        W A++ 
Sbjct: 123 KDGMEI-HGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLE-HRDVVSWTAMIA 180

Query: 590 ACMIHKDTNLAR 601
           AC+ H    LAR
Sbjct: 181 ACVQHDQFALAR 192


>gi|225428104|ref|XP_002278241.1| PREDICTED: pentatricopeptide repeat-containing protein At4g35130,
           chloroplastic [Vitis vinifera]
 gi|297744563|emb|CBI37825.3| unnamed protein product [Vitis vinifera]
          Length = 802

 Score =  493 bits (1270), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 279/786 (35%), Positives = 444/786 (56%), Gaps = 14/786 (1%)

Query: 4   KTPQSRNLFLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCY---A 60
           +TPQ+      +LK    ++  ++ +   ++   +N +S    L   LS +    Y   A
Sbjct: 26  RTPQTNPDTDLILKPRIFKTARSKRNQSFLVE--RNSVS----LTRALSSYVERGYMKNA 79

Query: 61  RALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASA 120
             LF ++ + D F++NV+IRGF +N +   ++ FY H  +   +  DNFTY FV+ A   
Sbjct: 80  LDLFENMRQCDTFIWNVMIRGFVDNGLFWDAVDFY-HRMEFGGVRGDNFTYPFVIKACGG 138

Query: 121 CCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSM 180
             D + G  +HG  I SG   D+++G +L+ +Y K   ++SA  VF +MP +D V WNSM
Sbjct: 139 LYDLAEGERVHGKVIKSGLDLDIYIGNSLIIMYAKIGCIESAEMVFREMPVRDLVSWNSM 198

Query: 181 ISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLG 240
           ISG +       S+  F +M +  G  LD  SV  +L A +    LR G EI C  ++  
Sbjct: 199 ISGYVSVGDGWRSLSCFREM-QASGIKLDRFSVIGILGACSLEGFLRNGKEIHCQMMRSR 257

Query: 241 FHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFR 300
               V V T LV  Y+KCG ++ AE LF  I    +++ NAMI GY+ N ++  S    R
Sbjct: 258 LELDVMVQTSLVDMYAKCGRMDYAERLFDQITDKSIVAWNAMIGGYSLNAQSFESFAYVR 317

Query: 301 QLLASAE-RVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRL 359
           ++    +   +  T++ L+P       + L   +H F +++G + +  + TAL  +Y   
Sbjct: 318 KMQEGGKLHPDWITMINLLPPCAQLEAILLGKSVHGFAIRNGFLPHLVLETALVDMYGEC 377

Query: 360 NEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSIL 419
            +++ A  LF + +E++L SWNAMIA YT+NG   +A++LFQ++    + P+  T++SIL
Sbjct: 378 GKLKPAECLFGQMNERNLISWNAMIASYTKNGENRKAMTLFQDLCNKTLKPDATTIASIL 437

Query: 420 SACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEV 479
            A A+L ++   + +H  V     +SN +VS +++ MY KCGN++ ARE+FD M+ K  +
Sbjct: 438 PAYAELASLREAEQIHGYVTKLKLDSNTFVSNSIVFMYGKCGNLLRAREIFDRMTFKDVI 497

Query: 480 TWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSM 539
           +WNT+I  Y +HG G  +++LFSEM   G  P+G TF+S+L +CS AGLV EG E F SM
Sbjct: 498 SWNTVIMAYAIHGFGRISIELFSEMREKGFEPNGSTFVSLLLSCSVAGLVNEGWEYFNSM 557

Query: 540 IHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNL 599
             D+   P  EHY C++D++GR G L+ A  FI+ + + P   +WG+LL A     D  L
Sbjct: 558 KRDYNINPGIEHYGCILDLIGRTGNLDHAKNFIEEMPLAPTARIWGSLLTASRNKGDVEL 617

Query: 600 ARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGG 659
           A +A+E +  L+ +N G +VLLSN+Y+    +     ++  +KK  L K+ GC+++++  
Sbjct: 618 AEIAAEHILSLEHDNTGCYVLLSNMYAEAGRWEDVERIKFHMKKEGLEKSVGCSVVDLSS 677

Query: 660 TPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKEL-MMKVHSE 718
               F + D+   +   +Y +L+ ++ K+ E  +   ++T     + E+K     K HS 
Sbjct: 678 KTFRFVNQDRSDNEINMVYDVLDIISKKIGEDVY-VHSLTKFRPSDLEKKRANSAKSHSL 736

Query: 719 KLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVC 778
           +LAI FGLI+T  G  + + KN+R+C  CH   K IS+ T R I+VRD+  FHHF GG C
Sbjct: 737 RLAICFGLISTTIGNPVLVRKNIRICEACHRFAKRISETTKREIIVRDSKIFHHFNGGHC 796

Query: 779 SCGDYW 784
           SCGDYW
Sbjct: 797 SCGDYW 802


>gi|357127622|ref|XP_003565478.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Brachypodium distachyon]
          Length = 870

 Score =  493 bits (1270), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 265/726 (36%), Positives = 405/726 (55%), Gaps = 4/726 (0%)

Query: 60  ARALFFSIPK-PDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAA 118
           AR +F  +P+  D+ ++  ++ G++     +  +  +  +     + PD +T S VL   
Sbjct: 148 ARRVFDEMPQVSDVRVWTALMSGYAKAGDLREGVLLFRKMH-CCGVRPDAYTISCVLKCI 206

Query: 119 SACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWN 178
           +       G ++HG     G+GS   VG AL+  Y K +  K A  VFD MP +D + WN
Sbjct: 207 AGLGSIEDGEVVHGLLEKLGFGSQCAVGNALMAFYAKSNRTKDAILVFDGMPHRDVISWN 266

Query: 179 SMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLK 238
           SMISG   N  +  +I +F  M   G   LDS ++ +VLPA AE+  L LG  +    +K
Sbjct: 267 SMISGCTSNGLYDKAIELFVRMWLEGEE-LDSATLLSVLPACAELHLLFLGRVVHGYSVK 325

Query: 239 LGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRL 298
            GF     +   L+  YS C +      +FR++V+ +++S  AMI+ YT  G  +    L
Sbjct: 326 TGFISQTSLANVLLDMYSNCSDWRSTNKIFRNMVQKNVVSWTAMITSYTRAGLYDKVAGL 385

Query: 299 FRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSR 358
           F+++     R +   I   +  F     L     +H + +++G+    +V  AL  +Y +
Sbjct: 386 FQEMGLEGTRPDIFAITSALHAFAGNELLKHGKSVHGYAIRNGMEKVLAVTNALMEMYVK 445

Query: 359 LNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSI 418
              ME A+ +FD    K + SWN +I GY++N L  EA SLF EM   ++ PN VT++ I
Sbjct: 446 CGNMEEAKLIFDGVVSKDMISWNTLIGGYSRNNLANEAFSLFTEMLL-QLRPNAVTMTCI 504

Query: 419 LSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSE 478
           L A A L ++  G+ +H     R +  + +V+ ALIDMY KCG ++ AR LFD +S+K+ 
Sbjct: 505 LPAAASLSSLERGREMHAYALRRGYLEDDFVANALIDMYVKCGALLLARRLFDRLSNKNL 564

Query: 479 VTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQS 538
           ++W  M++GYG+HG G +A+ LF +M  SGI P   +F ++LYACSH+GL  EG   F +
Sbjct: 565 ISWTIMVAGYGMHGRGRDAIALFEQMRVSGIAPDAASFSAILYACSHSGLRDEGWRFFDA 624

Query: 539 MIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTN 598
           M  +H  +P  +HY CMVD+L   G L++A EFI  + +EP  ++W +LL  C IH++  
Sbjct: 625 MRKEHKIEPRLKHYTCMVDLLINTGNLKEAYEFIDSMPIEPDSSIWVSLLRGCRIHRNVK 684

Query: 599 LARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVG 658
           LA   +E++FEL+PEN GY+VLL+NIY+    +     ++  +  R L +  GC+ IE  
Sbjct: 685 LAEEVAERVFELEPENTGYYVLLANIYAEAERWEAVRKLKNKIGGRGLRENTGCSWIEAK 744

Query: 659 GTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSE 718
           G  HVF + ++ HPQ T I   L ++  +M+E G   +   AL   +       +  HS 
Sbjct: 745 GKVHVFIADNRNHPQGTRIAEFLNEVAKRMQEEGHDPKKKYALMGADNAVHGEALCGHSS 804

Query: 719 KLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVC 778
           KLA+AFG++    G  IR+ KN RVC  CH A KFISK+  R I++RD+NRFHHF+ G C
Sbjct: 805 KLAVAFGVLNLSEGRLIRVTKNSRVCSHCHEAAKFISKMCSREIILRDSNRFHHFEQGRC 864

Query: 779 SCGDYW 784
           SC  YW
Sbjct: 865 SCRGYW 870



 Score =  217 bits (553), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 129/397 (32%), Positives = 214/397 (53%), Gaps = 3/397 (0%)

Query: 140 GSDLFVGAALVDLYFKFSWVKSARKVFDKMPE-KDTVLWNSMISGLMKNCCFQDSIWVFG 198
           G D  +G  LV +Y K   +++AR+VFD+MP+  D  +W +++SG  K    ++ + +F 
Sbjct: 126 GMDNVLGQKLVLMYLKCGDLENARRVFDEMPQVSDVRVWTALMSGYAKAGDLREGVLLFR 185

Query: 199 DMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKC 258
            M    G   D+ +++ VL  +A +  +  G  +  L  KLGF     V   L++FY+K 
Sbjct: 186 KM-HCCGVRPDAYTISCVLKCIAGLGSIEDGEVVHGLLEKLGFGSQCAVGNALMAFYAKS 244

Query: 259 GEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLI 318
              + A L+F  +   D+IS N+MISG T NG  + ++ LF ++    E ++S+T++ ++
Sbjct: 245 NRTKDAILVFDGMPHRDVISWNSMISGCTSNGLYDKAIELFVRMWLEGEELDSATLLSVL 304

Query: 319 PVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLA 378
           P       L L   +H + +K+G +S +S+   L  +YS  ++  +  K+F    +K++ 
Sbjct: 305 PACAELHLLFLGRVVHGYSVKTGFISQTSLANVLLDMYSNCSDWRSTNKIFRNMVQKNVV 364

Query: 379 SWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELV 438
           SW AMI  YT+ GL ++   LFQEM      P+   ++S L A A    +  GK VH   
Sbjct: 365 SWTAMITSYTRAGLYDKVAGLFQEMGLEGTRPDIFAITSALHAFAGNELLKHGKSVHGYA 424

Query: 439 KSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEAL 498
                E  + V+ AL++MY KCGN+ EA+ +FD +  K  ++WNT+I GY  +    EA 
Sbjct: 425 IRNGMEKVLAVTNALMEMYVKCGNMEEAKLIFDGVVSKDMISWNTLIGGYSRNNLANEAF 484

Query: 499 QLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEI 535
            LF+EML   +RP+ VT   +L A +    +  G E+
Sbjct: 485 SLFTEMLLQ-LRPNAVTMTCILPAAASLSSLERGREM 520


>gi|449455158|ref|XP_004145320.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Cucumis sativus]
 gi|449470513|ref|XP_004152961.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Cucumis sativus]
 gi|449523079|ref|XP_004168552.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Cucumis sativus]
          Length = 733

 Score =  493 bits (1270), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 260/678 (38%), Positives = 392/678 (57%), Gaps = 37/678 (5%)

Query: 140 GSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGD 199
            S LF  +AL      FS +  AR +FD++P+ +   WN++I     +     S  +F D
Sbjct: 60  ASKLFTASALS----SFSTLDYARNLFDQIPQPNLYTWNTLIRAYASSSDPFQSFVIFLD 115

Query: 200 MVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCG 259
           ++       +  +   V+ A +E++  R+G  +  + +KL F   +Y+L  LV FY  CG
Sbjct: 116 LLDKCEDLPNKFTFPFVIKAASELKASRVGTAVHGMAIKLSFGMDLYILNSLVRFYGACG 175

Query: 260 EVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIP 319
           ++  AE LF+ I   D++S N+MIS +      E +L LF ++       NS T+VG++ 
Sbjct: 176 DLSMAERLFKGISCKDVVSWNSMISAFAQGNCPEDALELFLKMERENVMPNSVTMVGVLS 235

Query: 320 VFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSE----- 374
                  L     + S+  + GI  + ++  A+  +Y++   ++ A+KLFDE  E     
Sbjct: 236 ACAKKLDLEFGRWVCSYIERKGIKVDLTLCNAMLDMYTKCGSVDDAQKLFDEMPERDVFS 295

Query: 375 --------------------------KSLASWNAMIAGYTQNGLTEEAISLFQEMQASKV 408
                                     K +A+WN +I+ Y QNG  +EA+++F E+Q SK+
Sbjct: 296 WTIMLDGYAKMGDYDAARLVFNAMPVKEIAAWNVLISAYEQNGKPKEALAIFNELQLSKI 355

Query: 409 A-PNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEAR 467
           A P+ VT+ S LSACAQLGAI LG W+H  +K      N ++ ++L+DMYAKCG++ +A 
Sbjct: 356 AKPDEVTLVSTLSACAQLGAIDLGGWIHVYIKREGIVLNCHLISSLVDMYAKCGSLEKAL 415

Query: 468 ELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAG 527
           E+F  +  +    W+ MI+G G+HG G  A+ LF EM  + ++P+ VTF +VL ACSHAG
Sbjct: 416 EVFYSVEERDVYVWSAMIAGLGMHGRGKAAIDLFFEMQEAKVKPNSVTFTNVLCACSHAG 475

Query: 528 LVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGAL 587
           LV EG   F  M   +G  P  +HYACMVDILGRAG LE+A+E I  ++  P  +VWGAL
Sbjct: 476 LVDEGRVFFHEMEPVYGVVPEMKHYACMVDILGRAGFLEEAMELINEMSTTPSASVWGAL 535

Query: 588 LGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLA 647
           LGAC +H +  L  +AS++L +L+P N G  VLLSNIY+    + + + +R++++  +L 
Sbjct: 536 LGACSLHMNVELGELASDQLLKLEPRNHGAIVLLSNIYAKTGRWEKVSELRKLMRDTELK 595

Query: 648 KAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEE 707
           K PGC+ IE  G  H F  GD  HP S+ IY+ LE++  K++  G++      L  +EE+
Sbjct: 596 KEPGCSSIEANGNVHEFLVGDNTHPLSSNIYSKLEEIATKLKSVGYEPNKSHLLQLIEED 655

Query: 708 E-KELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRD 766
           + KE  + +HSEKLAIAFGL+   P   IR++KNLR+C DCH   K +S+V  R I++RD
Sbjct: 656 DLKEQALSLHSEKLAIAFGLVTLAPSQPIRVVKNLRICGDCHAFAKLVSRVYDRDILLRD 715

Query: 767 ANRFHHFKGGVCSCGDYW 784
             RFHHF+ G CSC DYW
Sbjct: 716 RYRFHHFRDGHCSCMDYW 733



 Score =  221 bits (564), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 157/549 (28%), Positives = 262/549 (47%), Gaps = 42/549 (7%)

Query: 13  LSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKL--AHRLSDFKATCYARALFFSIPKP 70
           LS +    +  QL + HA+++  G   D  + +KL  A  LS F    YAR LF  IP+P
Sbjct: 29  LSTIDKCSSSKQLKEVHARMLRTGLFFDPFSASKLFTASALSSFSTLDYARNLFDQIPQP 88

Query: 71  DLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLL 130
           +L+ +N +IR ++++  P  S   +  L       P+ FT+ FV+ AAS      +G  +
Sbjct: 89  NLYTWNTLIRAYASSSDPFQSFVIFLDLLDKCEDLPNKFTFPFVIKAASELKASRVGTAV 148

Query: 131 HGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCF 190
           HG AI   +G DL++  +LV  Y     +  A ++F  +  KD V WNSMIS   +  C 
Sbjct: 149 HGMAIKLSFGMDLYILNSLVRFYGACGDLSMAERLFKGISCKDVVSWNSMISAFAQGNCP 208

Query: 191 QDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTG 250
           +D++ +F  M R      +S ++  VL A A+  +L  G  +     + G    + +   
Sbjct: 209 EDALELFLKMERE-NVMPNSVTMVGVLSACAKKLDLEFGRWVCSYIERKGIKVDLTLCNA 267

Query: 251 LVSFYSKCGEVERAELLFRDIVRPDLIS-------------------------------C 279
           ++  Y+KCG V+ A+ LF ++   D+ S                                
Sbjct: 268 MLDMYTKCGSVDDAQKLFDEMPERDVFSWTIMLDGYAKMGDYDAARLVFNAMPVKEIAAW 327

Query: 280 NAMISGYTCNGKTESSLRLFRQL-LASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCL 338
           N +IS Y  NGK + +L +F +L L+   + +  T+V  +      G + L   IH +  
Sbjct: 328 NVLISAYEQNGKPKEALAIFNELQLSKIAKPDEVTLVSTLSACAQLGAIDLGGWIHVYIK 387

Query: 339 KSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAIS 398
           + GIV N  ++++L  +Y++   +E A ++F    E+ +  W+AMIAG   +G  + AI 
Sbjct: 388 REGIVLNCHLISSLVDMYAKCGSLEKALEVFYSVEERDVYVWSAMIAGLGMHGRGKAAID 447

Query: 399 LFQEMQASKVAPNPVTVSSILSACAQLGAISLGK-WVHELVKSRNFESNIYVSTALIDMY 457
           LF EMQ +KV PN VT +++L AC+  G +  G+ + HE+         +     ++D+ 
Sbjct: 448 LFFEMQEAKVKPNSVTFTNVLCACSHAGLVDEGRVFFHEMEPVYGVVPEMKHYACMVDIL 507

Query: 458 AKCGNIVEARELFDLMS-HKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRP---SG 513
            + G + EA EL + MS   S   W  ++    LH   +E  +L S+ L   + P     
Sbjct: 508 GRAGFLEEAMELINEMSTTPSASVWGALLGACSLH-MNVELGELASDQLLK-LEPRNHGA 565

Query: 514 VTFLSVLYA 522
           +  LS +YA
Sbjct: 566 IVLLSNIYA 574


>gi|328774755|gb|AEB39777.1| pentatricopeptide repeat protein 91 [Funaria hygrometrica]
          Length = 890

 Score =  493 bits (1270), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 284/792 (35%), Positives = 422/792 (53%), Gaps = 38/792 (4%)

Query: 29  HAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNEMP 88
           H Q+   G   D+     L +  S F        +F  +   D+  ++ +I  ++ N  P
Sbjct: 101 HKQLDELGLAIDIYLGNSLINFYSKFGDVASVEQVFRRMTLRDVVTWSSMIAAYAGNNHP 160

Query: 89  KSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAA 148
             +   +  + K+  + P+  T+  +L A +          +H     SG  +D+ V  A
Sbjct: 161 AKAFDTFERM-KDANIEPNRITFLSILKACNNYSMLEKAREIHTVVKASGMETDVAVATA 219

Query: 149 LVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWL 208
           L+ +Y K   +  A ++F KM E++ V W ++I    ++    ++  ++  M++  G   
Sbjct: 220 LITMYSKCGEISLACEIFQKMKERNVVSWTAIIQANAQHRKLNEAFELYEKMLQ-AGISP 278

Query: 209 DSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLF 268
           ++ +  ++L +    + L  G  I     + G    V V   L++ Y KC  ++ A   F
Sbjct: 279 NAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDVVVANALITMYCKCNCIQDARETF 338

Query: 269 RDIVRPDLISCNAMISGYTCNG-KTESSLRLFRQLLASAER----VNSSTIVGLIPVFYP 323
             + + D+IS +AMI+GY  +G + + SL    QLL    R     N  T + ++     
Sbjct: 339 DRMSKRDVISWSAMIAGYAQSGYQDKESLDEVFQLLERMRREGVFPNKVTFMSILKACSV 398

Query: 324 FGHLHLTNCIHSFCLKSGIVSNSSVLTA-------------------------------L 352
            G L     IH+   K G  S+ S+ TA                               L
Sbjct: 399 HGALEQGRQIHAEISKVGFESDRSLQTAIFNMYAKCGSIYEAEQVFSKMENKNVVAWASL 458

Query: 353 STVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNP 412
            T+Y +  ++ +A K+F E S +++ SWN MIAGY Q+G   +   L   M+     P+ 
Sbjct: 459 LTMYIKCGDLTSAEKVFSEMSTRNVVSWNLMIAGYAQSGDIAKVFELLSSMKVEGFQPDR 518

Query: 413 VTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDL 472
           VT+ SIL AC  L A+  GK VH        ES+  V+T+LI MY+KCG + EAR +FD 
Sbjct: 519 VTIISILEACGALSALERGKLVHAEAVKLGLESDTVVATSLIGMYSKCGEVTEARTVFDK 578

Query: 473 MSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREG 532
           +S++  V WN M++GYG HG G EA+ LF  ML   + P+ +TF +V+ AC  AGLV+EG
Sbjct: 579 ISNRDTVAWNAMLAGYGQHGIGPEAVDLFKRMLKERVPPNEITFTAVISACGRAGLVQEG 638

Query: 533 DEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACM 592
            EIF+ M  D   KP  +HY CMVD+LGRAG+L++A EFI+ +  EP  +VW ALLGAC 
Sbjct: 639 REIFRIMQEDFRMKPGKQHYGCMVDLLGRAGRLQEAEEFIQRMPCEPDISVWHALLGACK 698

Query: 593 IHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGC 652
            H +  LA  A+  +  L+P N   +V LSNIY+    +  +  VR+V+  + L K  G 
Sbjct: 699 SHDNVQLAEWAAHHILRLEPSNASVYVTLSNIYAQAGRWDDSTKVRKVMDDKGLKKDRGE 758

Query: 653 TLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELM 712
           + IE+ G  H F + D  HP+  +I+A LE L  +M+EAG+  +    LHDV+E +KE  
Sbjct: 759 SSIEIDGRIHTFVAEDCAHPEIDSIHAELEMLTKEMKEAGYTPDMRFVLHDVDEVQKERA 818

Query: 713 MKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHH 772
           +  HSEKLAIA+GL+ T PGT IRI+KNLRVC DCHTATKFISK+  R IV RDANRFH+
Sbjct: 819 LCHHSEKLAIAYGLLKTPPGTPIRIMKNLRVCGDCHTATKFISKIRKREIVARDANRFHY 878

Query: 773 FKGGVCSCGDYW 784
           FK G CSCGD+W
Sbjct: 879 FKNGTCSCGDFW 890



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 120/432 (27%), Positives = 222/432 (51%), Gaps = 13/432 (3%)

Query: 190 FQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLT 249
            +++I + G +++  G  ++S +   ++   A+++    G  +     +LG    +Y+  
Sbjct: 59  LKEAIQLLG-IIKQRGLLVNSNTYGCIIEHCAKLRRFEDGKMVHKQLDELGLAIDIYLGN 117

Query: 250 GLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERV 309
            L++FYSK G+V   E +FR +   D+++ ++MI+ Y  N     +   F ++  +    
Sbjct: 118 SLINFYSKFGDVASVEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMKDANIEP 177

Query: 310 NSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLF 369
           N  T + ++     +  L     IH+    SG+ ++ +V TAL T+YS+  E+  A ++F
Sbjct: 178 NRITFLSILKACNNYSMLEKAREIHTVVKASGMETDVAVATALITMYSKCGEISLACEIF 237

Query: 370 DESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAIS 429
            +  E+++ SW A+I    Q+    EA  L+++M  + ++PN VT  S+L++C    A++
Sbjct: 238 QKMKERNVVSWTAIIQANAQHRKLNEAFELYEKMLQAGISPNAVTFVSLLNSCNTPEALN 297

Query: 430 LGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYG 489
            G+ +H  +  R  E+++ V+ ALI MY KC  I +ARE FD MS +  ++W+ MI+GY 
Sbjct: 298 RGRRIHSHISERGLETDVVVANALITMYCKCNCIQDARETFDRMSKRDVISWSAMIAGYA 357

Query: 490 LHGHG-----LEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHG 544
             G+       E  QL   M   G+ P+ VTF+S+L ACS  G + +G +I  + I   G
Sbjct: 358 QSGYQDKESLDEVFQLLERMRREGVFPNKVTFMSILKACSVHGALEQGRQI-HAEISKVG 416

Query: 545 FKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVAS 604
           F+        + ++  + G + +A +    +        W +LL   M  K  +L   ++
Sbjct: 417 FESDRSLQTAIFNMYAKCGSIYEAEQVFSKME-NKNVVAWASLL--TMYIKCGDL--TSA 471

Query: 605 EKLF-ELDPENV 615
           EK+F E+   NV
Sbjct: 472 EKVFSEMSTRNV 483


>gi|222641140|gb|EEE69272.1| hypothetical protein OsJ_28537 [Oryza sativa Japonica Group]
          Length = 784

 Score =  493 bits (1270), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 271/760 (35%), Positives = 412/760 (54%), Gaps = 3/760 (0%)

Query: 26  TQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSI-PKPDLFLFNVIIRGFSN 84
            Q HA  +  GF +D+     L      F     AR +F     + +   +N ++  +  
Sbjct: 27  AQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSAYVK 86

Query: 85  NEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLF 144
           N+    +I  +  +   + + P  F +S V++A +   +   G  +H   +  GY  D+F
Sbjct: 87  NDQCGDAIQVFGEMVW-SGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVF 145

Query: 145 VGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNG 204
              ALVD+Y K   V  A  +F+KMP+ D V WN++ISG + N     +I +   M ++ 
Sbjct: 146 TANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQM-KSS 204

Query: 205 GTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERA 264
           G   +   ++++L A A      LG +I    +K       Y+  GLV  Y+K   ++ A
Sbjct: 205 GLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDA 264

Query: 265 ELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPF 324
             +F  +   DLI  NA+ISG +  G+ + +  +F  L      VN +T+  ++      
Sbjct: 265 MKVFDWMSHRDLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKSTASL 324

Query: 325 GHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMI 384
                T  +H+   K G + ++ V+  L   Y + + +  A ++F+E S   + +  +MI
Sbjct: 325 EAASATRQVHALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMI 384

Query: 385 AGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFE 444
              +Q    E AI LF EM    + P+P  +SS+L+ACA L A   GK VH  +  R F 
Sbjct: 385 TALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFM 444

Query: 445 SNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEM 504
           S+ +   AL+  YAKCG+I +A   F  +  +  V+W+ MI G   HGHG  AL+LF  M
Sbjct: 445 SDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRM 504

Query: 505 LHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQ 564
           +  GI P+ +T  SVL AC+HAGLV E    F SM    G     EHY+CM+D+LGRAG+
Sbjct: 505 VDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGK 564

Query: 565 LEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNI 624
           L+ A+E +  +  +   +VWGALLGA  +HKD  L ++A+EKLF L+PE  G HVLL+N 
Sbjct: 565 LDDAMELVNSMPFQANASVWGALLGASRVHKDPELGKLAAEKLFILEPEKSGTHVLLANT 624

Query: 625 YSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKL 684
           Y++   + + A VR+++K   + K P  + +EV    H F  GD+ HP +  IY+ L++L
Sbjct: 625 YASSGMWNEVAKVRKLMKDSNIKKEPAMSWVEVKDKVHTFIVGDKSHPMTKEIYSKLDEL 684

Query: 685 NGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVC 744
              M +AG+       LHD++  EKEL++  HSE+LA+AF L++T PG  IR+ KNLR+C
Sbjct: 685 GDLMSKAGYIPNVDVDLHDLDRSEKELLLSHHSERLAVAFALLSTPPGAPIRVKKNLRIC 744

Query: 745 LDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
            DCH A KFIS +  R I++RD NRFHHF+ G CSCGDYW
Sbjct: 745 RDCHMAFKFISNIVSREIIIRDINRFHHFRDGTCSCGDYW 784



 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 141/484 (29%), Positives = 236/484 (48%), Gaps = 5/484 (1%)

Query: 113 FVLSAASACC-DRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKM-P 170
           F L     C  D  +G  +H  A+ +G+GSD+FV  ALV +Y  F ++  AR+VFD+   
Sbjct: 11  FALPVVLKCVPDAQLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFDEAGS 70

Query: 171 EKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGM 230
           E++ V WN ++S  +KN    D+I VFG+MV + G        + V+ A    + +  G 
Sbjct: 71  ERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWS-GIQPTEFGFSCVVNACTGSRNIDAGR 129

Query: 231 EIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNG 290
           ++  + +++G+   V+    LV  Y K G V+ A ++F  +   D++S NA+ISG   NG
Sbjct: 130 QVHAMVVRMGYEKDVFTANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNG 189

Query: 291 KTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLT 350
               ++ L  Q+ +S    N   +  ++      G   L   IH F +K+   S+  +  
Sbjct: 190 HDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDYIGV 249

Query: 351 ALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAP 410
            L  +Y++ + ++ A K+FD  S + L  WNA+I+G +  G  +EA S+F  ++   +  
Sbjct: 250 GLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGV 309

Query: 411 NPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELF 470
           N  T++++L + A L A S  + VH L +   F  + +V   LID Y KC  + +A  +F
Sbjct: 310 NRTTLAAVLKSTASLEAASATRQVHALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVF 369

Query: 471 DLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVR 530
           +  S    +   +MI+      HG  A++LF EML  G+ P      S+L AC+      
Sbjct: 370 EECSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYE 429

Query: 531 EGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGA 590
           +G ++   +I    F   A     +V    + G +E A      L  E G   W A++G 
Sbjct: 430 QGKQVHAHLIKRQ-FMSDAFAGNALVYTYAKCGSIEDAELAFSSLP-ERGVVSWSAMIGG 487

Query: 591 CMIH 594
              H
Sbjct: 488 LAQH 491


>gi|115478174|ref|NP_001062682.1| Os09g0251500 [Oryza sativa Japonica Group]
 gi|47848472|dbj|BAD22327.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|47848643|dbj|BAD22491.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|113630915|dbj|BAF24596.1| Os09g0251500 [Oryza sativa Japonica Group]
 gi|215767397|dbj|BAG99625.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 877

 Score =  493 bits (1270), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 271/760 (35%), Positives = 412/760 (54%), Gaps = 3/760 (0%)

Query: 26  TQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSI-PKPDLFLFNVIIRGFSN 84
            Q HA  +  GF +D+     L      F     AR +F     + +   +N ++  +  
Sbjct: 120 AQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSAYVK 179

Query: 85  NEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLF 144
           N+    +I  +  +   + + P  F +S V++A +   +   G  +H   +  GY  D+F
Sbjct: 180 NDQCGDAIQVFGEMVW-SGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVF 238

Query: 145 VGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNG 204
              ALVD+Y K   V  A  +F+KMP+ D V WN++ISG + N     +I +   M ++ 
Sbjct: 239 TANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQM-KSS 297

Query: 205 GTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERA 264
           G   +   ++++L A A      LG +I    +K       Y+  GLV  Y+K   ++ A
Sbjct: 298 GLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDA 357

Query: 265 ELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPF 324
             +F  +   DLI  NA+ISG +  G+ + +  +F  L      VN +T+  ++      
Sbjct: 358 MKVFDWMSHRDLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKSTASL 417

Query: 325 GHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMI 384
                T  +H+   K G + ++ V+  L   Y + + +  A ++F+E S   + +  +MI
Sbjct: 418 EAASATRQVHALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMI 477

Query: 385 AGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFE 444
              +Q    E AI LF EM    + P+P  +SS+L+ACA L A   GK VH  +  R F 
Sbjct: 478 TALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFM 537

Query: 445 SNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEM 504
           S+ +   AL+  YAKCG+I +A   F  +  +  V+W+ MI G   HGHG  AL+LF  M
Sbjct: 538 SDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRM 597

Query: 505 LHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQ 564
           +  GI P+ +T  SVL AC+HAGLV E    F SM    G     EHY+CM+D+LGRAG+
Sbjct: 598 VDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGK 657

Query: 565 LEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNI 624
           L+ A+E +  +  +   +VWGALLGA  +HKD  L ++A+EKLF L+PE  G HVLL+N 
Sbjct: 658 LDDAMELVNSMPFQANASVWGALLGASRVHKDPELGKLAAEKLFILEPEKSGTHVLLANT 717

Query: 625 YSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKL 684
           Y++   + + A VR+++K   + K P  + +EV    H F  GD+ HP +  IY+ L++L
Sbjct: 718 YASSGMWNEVAKVRKLMKDSNIKKEPAMSWVEVKDKVHTFIVGDKSHPMTKEIYSKLDEL 777

Query: 685 NGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVC 744
              M +AG+       LHD++  EKEL++  HSE+LA+AF L++T PG  IR+ KNLR+C
Sbjct: 778 GDLMSKAGYIPNVDVDLHDLDRSEKELLLSHHSERLAVAFALLSTPPGAPIRVKKNLRIC 837

Query: 745 LDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
            DCH A KFIS +  R I++RD NRFHHF+ G CSCGDYW
Sbjct: 838 RDCHMAFKFISNIVSREIIIRDINRFHHFRDGTCSCGDYW 877



 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 166/583 (28%), Positives = 279/583 (47%), Gaps = 12/583 (2%)

Query: 15  LLKGAKTQSQL--TQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDL 72
           L + A  Q+ L     HA ++  GF   L     L    S  +  C AR +F  IP P  
Sbjct: 11  LTRYAAAQALLPGAHLHANLLKSGFLASLRN--HLISFYSKCRRPCCARRVFDEIPDPCH 68

Query: 73  FLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHG 132
             ++ ++  +SNN +P+S+I  +  +R    +  + F    VL       D  +G  +H 
Sbjct: 69  VSWSSLVTAYSNNGLPRSAIQAFHGMRAE-GVCCNEFALPVVLKCVP---DAQLGAQVHA 124

Query: 133 HAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKM-PEKDTVLWNSMISGLMKNCCFQ 191
            A+ +G+GSD+FV  ALV +Y  F ++  AR+VFD+   E++ V WN ++S  +KN    
Sbjct: 125 MAMATGFGSDVFVANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSAYVKNDQCG 184

Query: 192 DSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGL 251
           D+I VFG+MV + G        + V+ A    + +  G ++  + +++G+   V+    L
Sbjct: 185 DAIQVFGEMVWS-GIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTANAL 243

Query: 252 VSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNS 311
           V  Y K G V+ A ++F  +   D++S NA+ISG   NG    ++ L  Q+ +S    N 
Sbjct: 244 VDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNV 303

Query: 312 STIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDE 371
             +  ++      G   L   IH F +K+   S+  +   L  +Y++ + ++ A K+FD 
Sbjct: 304 FMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDW 363

Query: 372 SSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLG 431
            S + L  WNA+I+G +  G  +EA S+F  ++   +  N  T++++L + A L A S  
Sbjct: 364 MSHRDLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASAT 423

Query: 432 KWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLH 491
           + VH L +   F  + +V   LID Y KC  + +A  +F+  S    +   +MI+     
Sbjct: 424 RQVHALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQC 483

Query: 492 GHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEH 551
            HG  A++LF EML  G+ P      S+L AC+      +G ++   +I    F   A  
Sbjct: 484 DHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQ-FMSDAFA 542

Query: 552 YACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIH 594
              +V    + G +E A      L  E G   W A++G    H
Sbjct: 543 GNALVYTYAKCGSIEDAELAFSSLP-ERGVVSWSAMIGGLAQH 584


>gi|359481040|ref|XP_002266469.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Vitis vinifera]
          Length = 709

 Score =  493 bits (1269), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 253/668 (37%), Positives = 387/668 (57%), Gaps = 31/668 (4%)

Query: 147 AALVDLYFKFSWVKSARKVFDKMPEKDTVL-WNSMISGLMKNCCFQDSIWVFGDMVRNGG 205
           + ++ +Y   + +  +  +F+ +P   T L W S+I     +  F  S+  F  M+ +G 
Sbjct: 43  STILSIYSNLNLLHDSLLIFNSLPSPPTTLAWKSIIRCYTSHGLFLHSLSFFIQMLASG- 101

Query: 206 TWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAE 265
            + D     +VL +   +++LR G  +    ++LG    +Y    L++ YSK   +E   
Sbjct: 102 KYPDHNVFPSVLKSCTLMKDLRFGESVHGCIIRLGMGFDLYTCNALMNMYSKFWSLEEVN 161

Query: 266 L-----------------------------LFRDIVRPDLISCNAMISGYTCNGKTESSL 296
                                         +F  + + D++S N +ISG   NG  E +L
Sbjct: 162 TYKKVFDEGKTSDVYSKKEKESYYLGSLRKVFEMMPKRDIVSWNTVISGNAQNGMHEDAL 221

Query: 297 RLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVY 356
            + R++  +  R +S T+  ++P+F  + +L     IH + +++G  ++  + ++L  +Y
Sbjct: 222 MMVREMGNADLRPDSFTLSSVLPIFAEYVNLLKGKEIHGYAIRNGYDADVFIGSSLIDMY 281

Query: 357 SRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVS 416
           ++   ++ + ++F    +    SWN++IAG  QNG+ +E +  FQ+M  +K+ PN V+ S
Sbjct: 282 AKCTRVDDSCRVFYMLPQHDGISWNSIIAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFS 341

Query: 417 SILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHK 476
           SI+ ACA L  + LGK +H  +    F+ N+++++AL+DMYAKCGNI  AR +FD M   
Sbjct: 342 SIMPACAHLTTLHLGKQLHGYIIRSRFDGNVFIASALVDMYAKCGNIRTARWIFDKMELY 401

Query: 477 SEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIF 536
             V+W  MI GY LHGH  +A+ LF  M   G++P+ V F++VL ACSHAGLV E  + F
Sbjct: 402 DMVSWTAMIMGYALHGHAYDAISLFKRMEVEGVKPNYVAFMAVLTACSHAGLVDEAWKYF 461

Query: 537 QSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKD 596
            SM  D+   P  EHYA + D+LGR G+LE+A EFI  + +EP  +VW  LL AC +HK+
Sbjct: 462 NSMTQDYRIIPGLEHYAAVADLLGRVGRLEEAYEFISDMHIEPTGSVWSTLLAACRVHKN 521

Query: 597 TNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIE 656
             LA   S+KLF +DP+N+G +VLLSNIYSA   +  A  +R  ++ + + K P C+ IE
Sbjct: 522 IELAEKVSKKLFTVDPQNIGAYVLLSNIYSAAGRWKDARKLRIAMRDKGMKKKPACSWIE 581

Query: 657 VGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVH 716
           +    H F +GD+ HP    I   L+ L  +M   G+  +T   LHDVEEE+K  ++  H
Sbjct: 582 IKNKVHAFVAGDKSHPYYDRINEALKVLLEQMEREGYVLDTTEVLHDVEEEQKRYLLCSH 641

Query: 717 SEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGG 776
           SE+LAI FG+I+T  GT IR+ KNLRVC+DCHTATKFISK+ GR IVVRD +RFHHFK G
Sbjct: 642 SERLAITFGIISTPAGTTIRVTKNLRVCVDCHTATKFISKIVGREIVVRDNSRFHHFKDG 701

Query: 777 VCSCGDYW 784
            CSCGD+W
Sbjct: 702 KCSCGDFW 709



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 155/579 (26%), Positives = 281/579 (48%), Gaps = 50/579 (8%)

Query: 8   SRNLFLSLLKG---AKTQSQLTQTHAQIIIHGFQND--LSTVTKLAHRLSDFKATCYARA 62
           ++NL  +LL+     K++SQ  Q HAQI+     +   LST+  +   L+    +     
Sbjct: 4   TQNLCKTLLQNPSSVKSKSQAKQLHAQILRTSLPSPSLLSTILSIYSNLNLLHDSL---L 60

Query: 63  LFFSIPKPDLFL-FNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASAC 121
           +F S+P P   L +  IIR ++++ +   S+ F+  +   +   PD+  +  VL + +  
Sbjct: 61  IFNSLPSPPTTLAWKSIIRCYTSHGLFLHSLSFFIQMLA-SGKYPDHNVFPSVLKSCTLM 119

Query: 122 CDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKF------------------------- 156
            D   G  +HG  I  G G DL+   AL+++Y KF                         
Sbjct: 120 KDLRFGESVHGCIIRLGMGFDLYTCNALMNMYSKFWSLEEVNTYKKVFDEGKTSDVYSKK 179

Query: 157 ----SWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTS 212
                ++ S RKVF+ MP++D V WN++ISG  +N   +D++ +  +M  N     DS +
Sbjct: 180 EKESYYLGSLRKVFEMMPKRDIVSWNTVISGNAQNGMHEDALMMVREM-GNADLRPDSFT 238

Query: 213 VAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIV 272
           +++VLP  AE   L  G EI    ++ G+   V++ + L+  Y+KC  V+ +  +F  + 
Sbjct: 239 LSSVLPIFAEYVNLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLP 298

Query: 273 RPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNC 332
           + D IS N++I+G   NG  +  L+ F+Q+L +  + N  +   ++P       LHL   
Sbjct: 299 QHDGISWNSIIAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQ 358

Query: 333 IHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGL 392
           +H + ++S    N  + +AL  +Y++   +  AR +FD+     + SW AMI GY  +G 
Sbjct: 359 LHGYIIRSRFDGNVFIASALVDMYAKCGNIRTARWIFDKMELYDMVSWTAMIMGYALHGH 418

Query: 393 TEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLG-KWVHELVKSRNFESNIYVST 451
             +AISLF+ M+   V PN V   ++L+AC+  G +    K+ + + +       +    
Sbjct: 419 AYDAISLFKRMEVEGVKPNYVAFMAVLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYA 478

Query: 452 ALIDMYAKCGNIVEARELF-DLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIR 510
           A+ D+  + G + EA E   D+    +   W+T+++   +H + +E  +  S+ L + + 
Sbjct: 479 AVADLLGRVGRLEEAYEFISDMHIEPTGSVWSTLLAACRVHKN-IELAEKVSKKLFT-VD 536

Query: 511 PSGV---TFLSVLYACSHAGLVREGDEIFQSMIHDHGFK 546
           P  +     LS +Y  S AG  ++  ++  +M  D G K
Sbjct: 537 PQNIGAYVLLSNIY--SAAGRWKDARKLRIAM-RDKGMK 572


>gi|357480925|ref|XP_003610748.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355512083|gb|AES93706.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 828

 Score =  493 bits (1269), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 272/804 (33%), Positives = 436/804 (54%), Gaps = 35/804 (4%)

Query: 14  SLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIP--KPD 71
           S L+  KT  +L Q H  ++  G  N ++ +     ++   ++  YA   F      K  
Sbjct: 27  SSLQTCKTLIELKQLHCNMLKKGVFN-INKLIAACVQMGTHESLNYALNAFKEDEGTKCS 85

Query: 72  LFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLH 131
           L+  N +IRG++ + + K +I  Y H+     + PDNFT+ F+LSA S     S GV +H
Sbjct: 86  LYTCNTLIRGYAASGLCKEAIFIYLHMIIVMGIVPDNFTFPFLLSACSKIMAFSEGVQVH 145

Query: 132 GHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQ 191
           G  +  G   DLFV  +L+  Y     V   RKVFD+M E++ V W S+I+G       +
Sbjct: 146 GVVVKMGLVKDLFVANSLIHFYAACGKVDLGRKVFDEMLERNVVSWTSLINGYSVVNMAK 205

Query: 192 DSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGL 251
           +++ +F +MV  G      T V A+  A A++++L LG ++  L  +LG   +  V+  L
Sbjct: 206 EAVCLFFEMVEVGVEPNPVTMVCAI-SACAKLKDLELGKKVCNLMTELGVKSNTLVVNAL 264

Query: 252 VSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNS 311
           +  Y KCG++     +F +    +L+  N ++S Y  +G     L +  ++L   +R + 
Sbjct: 265 LDMYMKCGDMYAVREIFDEFSDKNLVMYNTIMSNYVQHGLAGEVLVVLDEMLQKGQRPDK 324

Query: 312 STIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDE 371
            T++  I      G L +    H++  ++G+    ++  A+  +Y +  + EAA K+FD 
Sbjct: 325 VTMLSTIAACAQLGDLSVGKSSHAYVFRNGLERLDNISNAIIDMYMKCGKREAACKVFDS 384

Query: 372 SSEKSLASWNAMIAGYTQNG-------------------------------LTEEAISLF 400
            S K++ +WN++IAG  ++G                               + EEAI L 
Sbjct: 385 MSNKTVVTWNSLIAGLVRDGELELALRIFGEMPESNLVSWNTMIGAMVQASMFEEAIDLL 444

Query: 401 QEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKC 460
           +EMQ   +  + VT+  I SAC  LGA+ L KW++  ++  +   ++ + TAL+DM+++C
Sbjct: 445 REMQNQGIKGDRVTMVGIASACGYLGALDLAKWIYTYIEKNDIHIDMQLGTALVDMFSRC 504

Query: 461 GNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVL 520
           G+ + A  +F+ M  +    W   I    + G+   A++LF EML   ++     F+++L
Sbjct: 505 GDPLNAMRVFENMEKRDVSAWTAAIRVKAVEGNAKGAIELFDEMLKQDVKADDFVFVALL 564

Query: 521 YACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPG 580
            A SH G V +G ++F +M   HG  P   HY CMVD+LGRAG LE+A + +K + ++P 
Sbjct: 565 TAFSHGGYVDQGRQLFWAMEKIHGVSPQIVHYGCMVDLLGRAGLLEEAFDLMKSMPIKPN 624

Query: 581 PAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQV 640
             +WG+ L AC  HK+   A  A EK+ +L PE VG HVLLSNIY++   +   A VR  
Sbjct: 625 DVIWGSFLAACRKHKNVEFANYADEKITQLAPEKVGIHVLLSNIYASAGKWNDVARVRLQ 684

Query: 641 VKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTA 700
           +K++   K  G + IEV G    FTSGD+ H ++  I  ML+++N ++ + G+  +T   
Sbjct: 685 MKEKGFQKVAGSSSIEVHGLIREFTSGDESHTENAQIGLMLQEINCRISQVGYVPDTTNV 744

Query: 701 LHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGR 760
           L DV+E+EKE ++  HSEKLA+A+GLI T  G  IR++KNLR+C DCH+  K +SK+ GR
Sbjct: 745 LVDVDEQEKEHLLSRHSEKLAMAYGLINTGKGIPIRVVKNLRMCSDCHSFAKLVSKLYGR 804

Query: 761 VIVVRDANRFHHFKGGVCSCGDYW 784
            I VRD NR+H FK G CSC D+W
Sbjct: 805 EITVRDNNRYHFFKEGFCSCRDFW 828


>gi|356509847|ref|XP_003523656.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
            [Glycine max]
          Length = 1611

 Score =  493 bits (1268), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 281/761 (36%), Positives = 427/761 (56%), Gaps = 17/761 (2%)

Query: 36   GFQNDLSTVTKLAH---------RLSDFKATCYARALF-FSIPKPDLFLFN-VIIRGFSN 84
            GF+ D  T+  L+           L  FKA  YA  LF +     D+ ++N  + R    
Sbjct: 856  GFRPDDVTLRTLSRVVKCKKNILELKQFKA--YATKLFMYDDDGSDVIVWNKALSRFLQR 913

Query: 85   NEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLF 144
             E  ++  CF   +  N+ +  D  T+  +L+  +      +G  +HG  + SG    + 
Sbjct: 914  GEAWEAVDCFVDMI--NSRVACDGLTFVVMLTVVAGLNCLELGKQIHGIVMRSGLDQVVS 971

Query: 145  VGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNG 204
            VG  L+++Y K   V  AR VF +M E D + WN+MISG   +   + S+ +F  ++R+ 
Sbjct: 972  VGNCLINMYVKAGSVSRARSVFGQMNEVDLISWNTMISGCTLSGLEECSVGMFVHLLRDS 1031

Query: 205  GTWLDSTSVAAVLPAVAEVQE-LRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVER 263
                D  +VA+VL A + ++    L  +I    +K G     +V T L+  YSK G++E 
Sbjct: 1032 -LLPDQFTVASVLRACSSLEGGYYLATQIHACAMKAGVVLDSFVSTALIDVYSKRGKMEE 1090

Query: 264  AELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYP 323
            AE LF +    DL S NA++ GY  +G    +LRL+  +  S ER +  T+V        
Sbjct: 1091 AEFLFVNQDGFDLASWNAIMHGYIVSGDFPKALRLYILMQESGERSDQITLVNAAKAAGG 1150

Query: 324  FGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAM 383
               L     IH+  +K G   +  V + +  +Y +  EME+AR++F E       +W  M
Sbjct: 1151 LVGLKQGKQIHAVVVKRGFNLDLFVTSGVLDMYLKCGEMESARRVFSEIPSPDDVAWTTM 1210

Query: 384  IAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNF 443
            I+G  +NG  E A+  + +M+ SKV P+  T ++++ AC+ L A+  G+ +H  +   N 
Sbjct: 1211 ISGCVENGQEEHALFTYHQMRLSKVQPDEYTFATLVKACSLLTALEQGRQIHANIVKLNC 1270

Query: 444  ESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSE 503
              + +V T+L+DMYAKCGNI +AR LF   + +   +WN MI G   HG+  EALQ F  
Sbjct: 1271 AFDPFVMTSLVDMYAKCGNIEDARGLFKRTNTRRIASWNAMIVGLAQHGNAKEALQFFKY 1330

Query: 504  MLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAG 563
            M   G+ P  VTF+ VL ACSH+GLV E  E F SM  ++G +P  EHY+C+VD L RAG
Sbjct: 1331 MKSRGVMPDRVTFIGVLSACSHSGLVSEAYENFYSMQKNYGIEPEIEHYSCLVDALSRAG 1390

Query: 564  QLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSN 623
            ++E+A + I  +  E   +++  LL AC +  D    +  +EKL  L+P +   +VLLSN
Sbjct: 1391 RIEEAEKVISSMPFEASASMYRTLLNACRVQVDRETGKRVAEKLLALEPSDSAAYVLLSN 1450

Query: 624  IYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEK 683
            +Y+A   +   A+ R +++K  + K PG + +++    H+F +GD+ H ++  IY  +E 
Sbjct: 1451 VYAAANQWENVASARNMMRKVNVKKDPGFSWVDLKNKVHLFVAGDRSHEETDVIYNKVEY 1510

Query: 684  LNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRV 743
            +  ++RE G+  +T  AL DVEEE+KE  +  HSEKLAIA+GL+ T P T +R+IKNLRV
Sbjct: 1511 IMKRIREEGYVPDTDFALVDVEEEDKECSLYYHSEKLAIAYGLMKTPPSTTLRVIKNLRV 1570

Query: 744  CLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
            C DCH+A K+ISKV  R IV+RDANRFHHF+ G+CSCGDYW
Sbjct: 1571 CGDCHSAIKYISKVFKREIVLRDANRFHHFRNGICSCGDYW 1611



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 126/472 (26%), Positives = 234/472 (49%), Gaps = 4/472 (0%)

Query: 11   LFLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKP 70
            + L+++ G        Q H  ++  G    +S    L +      +   AR++F  + + 
Sbjct: 940  VMLTVVAGLNCLELGKQIHGIVMRSGLDQVVSVGNCLINMYVKAGSVSRARSVFGQMNEV 999

Query: 71   DLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASAC-CDRSIGVL 129
            DL  +N +I G + + + + S+  + HL +++ L PD FT + VL A S+      +   
Sbjct: 1000 DLISWNTMISGCTLSGLEECSVGMFVHLLRDS-LLPDQFTVASVLRACSSLEGGYYLATQ 1058

Query: 130  LHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCC 189
            +H  A+ +G   D FV  AL+D+Y K   ++ A  +F      D   WN+++ G + +  
Sbjct: 1059 IHACAMKAGVVLDSFVSTALIDVYSKRGKMEEAEFLFVNQDGFDLASWNAIMHGYIVSGD 1118

Query: 190  FQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLT 249
            F  ++ ++  +++  G   D  ++     A   +  L+ G +I  + +K GF+  ++V +
Sbjct: 1119 FPKALRLY-ILMQESGERSDQITLVNAAKAAGGLVGLKQGKQIHAVVVKRGFNLDLFVTS 1177

Query: 250  GLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERV 309
            G++  Y KCGE+E A  +F +I  PD ++   MISG   NG+ E +L  + Q+  S  + 
Sbjct: 1178 GVLDMYLKCGEMESARRVFSEIPSPDDVAWTTMISGCVENGQEEHALFTYHQMRLSKVQP 1237

Query: 310  NSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLF 369
            +  T   L+        L     IH+  +K     +  V+T+L  +Y++   +E AR LF
Sbjct: 1238 DEYTFATLVKACSLLTALEQGRQIHANIVKLNCAFDPFVMTSLVDMYAKCGNIEDARGLF 1297

Query: 370  DESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAIS 429
              ++ + +ASWNAMI G  Q+G  +EA+  F+ M++  V P+ VT   +LSAC+  G +S
Sbjct: 1298 KRTNTRRIASWNAMIVGLAQHGNAKEALQFFKYMKSRGVMPDRVTFIGVLSACSHSGLVS 1357

Query: 430  LG-KWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVT 480
               +  + + K+   E  I   + L+D  ++ G I EA ++   M  ++  +
Sbjct: 1358 EAYENFYSMQKNYGIEPEIEHYSCLVDALSRAGRIEEAEKVISSMPFEASAS 1409



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 152/588 (25%), Positives = 259/588 (44%), Gaps = 40/588 (6%)

Query: 13   LSLLKGAKTQSQLT---QTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPK 69
             S+L+ A   S L+   + HA+I+  G   D      L    +   +   AR LF + P 
Sbjct: 660  FSILRQAIAASDLSLGKRAHARILTSGHHPDRFVTNNLITMYAKCGSLSSARKLFDTTPD 719

Query: 70   P--DLFLFNVIIRGFSNNEMPKSSICFYT-HLRKNTALTPDNFTYSFVLSAASACCDRSI 126
               DL  +N I+   + +   KS   F+   L + + ++    T + V          S 
Sbjct: 720  TNRDLVTWNAILSALAAH-ADKSHDGFHLFRLLRRSVVSTTRHTLAPVFKMCLLSASPSA 778

Query: 127  GVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMK 186
               LHG+A+  G   D+FV  ALV++Y KF  ++ AR +FD M  +D VLWN M+   + 
Sbjct: 779  SESLHGYAVKIGLQWDVFVAGALVNIYAKFGLIREARVLFDGMAVRDVVLWNVMMKAYVD 838

Query: 187  NCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELR-LGMEIQCLGLKLGFHDHV 245
             C   +++ +F +  R G    D T              LR L   ++C         ++
Sbjct: 839  TCLEYEAMLLFSEFHRTGFRPDDVT--------------LRTLSRVVKC-------KKNI 877

Query: 246  YVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLAS 305
              L    ++ +K        L   D    D+I  N  +S +   G+   ++  F  ++ S
Sbjct: 878  LELKQFKAYATK--------LFMYDDDGSDVIVWNKALSRFLQRGEAWEAVDCFVDMINS 929

Query: 306  AERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAA 365
                +  T V ++ V      L L   IH   ++SG+    SV   L  +Y +   +  A
Sbjct: 930  RVACDGLTFVVMLTVVAGLNCLELGKQIHGIVMRSGLDQVVSVGNCLINMYVKAGSVSRA 989

Query: 366  RKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQL 425
            R +F + +E  L SWN MI+G T +GL E ++ +F  +    + P+  TV+S+L AC+ L
Sbjct: 990  RSVFGQMNEVDLISWNTMISGCTLSGLEECSVGMFVHLLRDSLLPDQFTVASVLRACSSL 1049

Query: 426  -GAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTM 484
             G   L   +H          + +VSTALID+Y+K G + EA  LF         +WN +
Sbjct: 1050 EGGYYLATQIHACAMKAGVVLDSFVSTALIDVYSKRGKMEEAEFLFVNQDGFDLASWNAI 1109

Query: 485  ISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHG 544
            + GY + G   +AL+L+  M  SG R   +T ++   A      +++G +I  +++   G
Sbjct: 1110 MHGYIVSGDFPKALRLYILMQESGERSDQITLVNAAKAAGGLVGLKQGKQI-HAVVVKRG 1168

Query: 545  FKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACM 592
            F       + ++D+  + G++E A      +   P    W  ++  C+
Sbjct: 1169 FNLDLFVTSGVLDMYLKCGEMESARRVFSEIP-SPDDVAWTTMISGCV 1215


>gi|359489786|ref|XP_002271725.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g16860-like [Vitis vinifera]
          Length = 852

 Score =  492 bits (1267), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 292/827 (35%), Positives = 445/827 (53%), Gaps = 56/827 (6%)

Query: 10  NLFLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRL-SDFKATCYARALFFSIP 68
           +L  +L    K+ +     H Q+++ G  +D + +  +     S  KA    R L  S  
Sbjct: 30  DLTSTLFHQCKSLASAELIHQQLLVQGLPHDPTHIISMYLTFNSPAKALSVLRRLHPS-- 87

Query: 69  KPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGV 128
              +F +N +IR   +    +  +  Y  +++     PD++T+ FVL A         G 
Sbjct: 88  SHTVFWWNQLIRRSVHLGFLEDVLQLYRRMQR-LGWRPDHYTFPFVLKACGEIPSFRCGA 146

Query: 129 LLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEK---DTVLWNSMISGLM 185
            +H     SG+  ++FVG  LV +Y +    ++AR+VFD+M E+   D V WNS+++  M
Sbjct: 147 SVHAVVFASGFEWNVFVGNGLVSMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAAYM 206

Query: 186 KNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHV 245
           +      ++ +F  M  + G   D+ S+  VLPA A V     G ++    L+ G  + V
Sbjct: 207 QGGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPACASVGAWSRGKQVHGYALRSGLFEDV 266

Query: 246 YVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLF------ 299
           +V   +V  Y+KCG +E A  +F  +   D++S NAM++GY+  G+ + +L LF      
Sbjct: 267 FVGNAVVDMYAKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREE 326

Query: 300 -----------------------------RQLLASAERVNSSTIVGLIPVFYPFG---HL 327
                                        RQ+       N  T+V L+      G   H 
Sbjct: 327 KIELNVVTWSAVIAGYAQRGLGFEALDVFRQMRLCGSEPNVVTLVSLLSGCALAGTLLHG 386

Query: 328 HLTNCIHSFCLKSGIVSNSS-----VLTALSTVYSRLNEMEAARKLFD--ESSEKSLASW 380
             T+C H+      +  N       V+ AL  +YS+    +AAR +FD     ++S+ +W
Sbjct: 387 KETHC-HAIKWILNLDENDPGDDLMVINALIDMYSKCKSPKAARAMFDLIPPKDRSVVTW 445

Query: 381 NAMIAGYTQNGLTEEAISLFQEMQASK--VAPNPVTVSSILSACAQLGAISLGKWVHELV 438
             +I G  Q+G   EA+ LF +M      V PN  T+S  L ACA+LGA+  G+ +H  V
Sbjct: 446 TVLIGGNAQHGEANEALELFSQMLQPDNFVMPNAFTISCALMACARLGALRFGRQIHAYV 505

Query: 439 KSRNFESN-IYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEA 497
               FES  ++V+  LIDMY+K G++  AR +FD M  ++ V+W ++++GYG+HG G EA
Sbjct: 506 LRNRFESAMLFVANCLIDMYSKSGDVDAARVVFDNMHQRNGVSWTSLMTGYGMHGRGEEA 565

Query: 498 LQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVD 557
           LQ+F EM   G+ P GVTF+ VLYACSH+G+V +G   F  M  D G  P AEHYACMVD
Sbjct: 566 LQIFYEMQKVGLVPDGVTFVVVLYACSHSGMVDQGINYFNGMNKDFGVVPGAEHYACMVD 625

Query: 558 ILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGY 617
           +L RAG+L++A+E I+G+ ++P PAVW ALL AC ++ +  L   A+ +L EL+  N G 
Sbjct: 626 LLSRAGRLDEAMELIRGMPMKPTPAVWVALLSACRVYANVELGEYAANQLLELESGNDGS 685

Query: 618 HVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAI 677
           + LLSNIY+  R +   A +R ++K   + K PGC+ ++       F +GD  HP S  I
Sbjct: 686 YTLLSNIYANARCWKDVARIRYLMKNTGIKKRPGCSWVQGRKGTATFFAGDWSHPMSQQI 745

Query: 678 YAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRI 737
           Y +L  L  +++  G+  +   ALHDV++EEK  ++  HSEKLA+A+G++ T PG  IRI
Sbjct: 746 YDLLRDLMQRIKALGYVPDNRFALHDVDDEEKGDLLSEHSEKLALAYGILTTAPGAPIRI 805

Query: 738 IKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
            KNLR C DCH+A  +IS +    I+VRD++RFHHFK G CSC  YW
Sbjct: 806 TKNLRACGDCHSAFTYISIIIEHEIIVRDSSRFHHFKNGSCSCRGYW 852


>gi|326529685|dbj|BAK04789.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 879

 Score =  492 bits (1266), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 279/773 (36%), Positives = 421/773 (54%), Gaps = 5/773 (0%)

Query: 15  LLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKP-DLF 73
           +LK A       Q HA  +  G   D+     L      F     AR +F    +  +  
Sbjct: 109 VLKCAPDAGLGVQVHAVAVSTGLSGDIFVANALVAMYGGFGFVDEARRVFDEAARDRNAV 168

Query: 74  LFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGH 133
            +N ++  F  N+    ++  +  +   + + P+ F +S V++A +   D   G  +H  
Sbjct: 169 SWNGMMSAFVKNDRCSDAVELFGEMVW-SGVRPNEFGFSCVVNACTGSRDLEAGRKVHAM 227

Query: 134 AIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDS 193
            + +GY  D+F   ALVD+Y K   +  A  VF K+P+ D V WN+ ISG + +   Q +
Sbjct: 228 VVRTGYDKDVFTANALVDMYSKLGDIHMAALVFGKVPKTDVVSWNAFISGCVLHGHDQHA 287

Query: 194 IWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLG--LKLGFHDHVYVLTGL 251
           + +   M ++ G   +  +++++L A A        +  Q  G  +K       Y+   L
Sbjct: 288 LELLLQM-KSSGLVPNVFTLSSILKACAGAGAGAFALGRQIHGFMIKACADSDDYIGVAL 346

Query: 252 VSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNS 311
           V  Y+K G ++ A  +F  I R DL+  NA+ISG +  G    SL LF ++      +N 
Sbjct: 347 VDMYAKYGLLDDARKVFEWIPRKDLLLWNALISGCSHGGCHGESLSLFCRMRKEGSDINR 406

Query: 312 STIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDE 371
           +T+  ++        +  T  +H+   K G +S+S V+  L   Y + N +  A K+F+E
Sbjct: 407 TTLAAVLKSTASLEAISDTTQVHALAEKIGFLSDSHVVNGLIDSYWKCNCLRYANKVFEE 466

Query: 372 SSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLG 431
            S  ++ ++ +MI   +Q    E+AI LF EM    + P+P  +SS+L+ACA L A   G
Sbjct: 467 HSSDNIIAFTSMITALSQCDHGEDAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQG 526

Query: 432 KWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLH 491
           K VH  +  R F ++++   AL+  YAKCG+I +A   F  +  K  V+W+ MI G   H
Sbjct: 527 KQVHAHLIKRKFMTDVFAGNALVYTYAKCGSIEDADLAFSGLPDKGVVSWSAMIGGLAQH 586

Query: 492 GHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEH 551
           GHG  AL +F  M+   I P+ +T  SVL AC+HAGLV E    F SM    G     EH
Sbjct: 587 GHGKRALDVFRRMVDERIAPNHITLTSVLCACNHAGLVDEAKGYFSSMKEMFGIDRTEEH 646

Query: 552 YACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELD 611
           Y+CM+D+LGRAG+L+ A+E +  +  E   AVWGALL A  +H+D  L ++A+EKLF L+
Sbjct: 647 YSCMIDLLGRAGKLDDAMELVNSMPFEANAAVWGALLAASRVHRDPELGKLAAEKLFVLE 706

Query: 612 PENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLH 671
           PE  G HVLL+N Y++   + + A VR+++K  K+ K P  + +E+    H F  GD+ H
Sbjct: 707 PEKSGTHVLLANTYASAGMWDEVAKVRKLMKDSKVKKEPAMSWVELKDRVHTFIVGDKSH 766

Query: 672 PQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEP 731
           P++  IYA LE+L   M +AG+       LHDV++ EKEL++  HSE+LA+AF LI+T  
Sbjct: 767 PRARDIYAKLEELGDLMSKAGYVPNLEVDLHDVDKSEKELLLSHHSERLAVAFALISTPA 826

Query: 732 GTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           G  IR+ KNLR+C DCH A KFISK+  R I++RD NRFHHF  G CSCGDYW
Sbjct: 827 GAPIRVKKNLRICRDCHVAFKFISKIVSREIIIRDINRFHHFSDGACSCGDYW 879



 Score =  236 bits (602), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 174/607 (28%), Positives = 298/607 (49%), Gaps = 36/607 (5%)

Query: 3   MKTPQSRNLFLSLLKGAKTQSQL--TQTHAQII----IHGFQNDLSTVTKLAHRLSDFKA 56
           M++P+S +  L+  + A TQS       HA ++    +H F+N         H LS F +
Sbjct: 1   MRSPESISPLLT--RYAATQSLFLGAHIHAHLLKSGLLHAFRN---------HLLS-FYS 48

Query: 57  TCY----ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYS 112
            C     AR +F   P P    ++ ++  +SNN +P+ ++  +  +R    +  + F   
Sbjct: 49  KCRLPGSARRVFDETPDPCHVSWSSLVTAYSNNALPREALAAFRAMRAR-GVRCNEFALP 107

Query: 113 FVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMP-E 171
            VL  A    D  +GV +H  A+ +G   D+FV  ALV +Y  F +V  AR+VFD+   +
Sbjct: 108 IVLKCAP---DAGLGVQVHAVAVSTGLSGDIFVANALVAMYGGFGFVDEARRVFDEAARD 164

Query: 172 KDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGME 231
           ++ V WN M+S  +KN    D++ +FG+MV + G   +    + V+ A    ++L  G +
Sbjct: 165 RNAVSWNGMMSAFVKNDRCSDAVELFGEMVWS-GVRPNEFGFSCVVNACTGSRDLEAGRK 223

Query: 232 IQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGK 291
           +  + ++ G+   V+    LV  YSK G++  A L+F  + + D++S NA ISG   +G 
Sbjct: 224 VHAMVVRTGYDKDVFTANALVDMYSKLGDIHMAALVFGKVPKTDVVSWNAFISGCVLHGH 283

Query: 292 TESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNC--IHSFCLKSGIVSNSSVL 349
            + +L L  Q+ +S    N  T+  ++      G         IH F +K+   S+  + 
Sbjct: 284 DQHALELLLQMKSSGLVPNVFTLSSILKACAGAGAGAFALGRQIHGFMIKACADSDDYIG 343

Query: 350 TALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVA 409
            AL  +Y++   ++ ARK+F+    K L  WNA+I+G +  G   E++SLF  M+     
Sbjct: 344 VALVDMYAKYGLLDDARKVFEWIPRKDLLLWNALISGCSHGGCHGESLSLFCRMRKEGSD 403

Query: 410 PNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEAREL 469
            N  T++++L + A L AIS    VH L +   F S+ +V   LID Y KC  +  A ++
Sbjct: 404 INRTTLAAVLKSTASLEAISDTTQVHALAEKIGFLSDSHVVNGLIDSYWKCNCLRYANKV 463

Query: 470 FDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLV 529
           F+  S  + + + +MI+      HG +A++LF EML  G+ P      S+L AC+     
Sbjct: 464 FEEHSSDNIIAFTSMITALSQCDHGEDAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAY 523

Query: 530 REGDEIFQSMIHDHGFKPLAEHYA--CMVDILGRAGQLEKALEFIKGLAVEPGPAVWGAL 587
            +G ++   +I     K + + +A   +V    + G +E A     GL  + G   W A+
Sbjct: 524 EQGKQVHAHLIKR---KFMTDVFAGNALVYTYAKCGSIEDADLAFSGLP-DKGVVSWSAM 579

Query: 588 LGACMIH 594
           +G    H
Sbjct: 580 IGGLAQH 586


>gi|297833028|ref|XP_002884396.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297330236|gb|EFH60655.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 882

 Score =  492 bits (1266), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 279/758 (36%), Positives = 432/758 (56%), Gaps = 4/758 (0%)

Query: 28  THAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNEM 87
            + QI+  GF++DL     L    S       AR +F  +P  DL  +N +I G+S++  
Sbjct: 128 VYKQILEMGFESDLYVGNALVDMYSRMGLLSRARQVFDEMPVRDLVSWNSLISGYSSHGY 187

Query: 88  PKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGA 147
            + ++  Y  LR N+ + PD+FT S VL A +       G  LHG  + SG  S   V  
Sbjct: 188 YEEALEIYHELR-NSWIVPDSFTVSSVLPAFANLLVVKQGQGLHGFTLKSGVNSVSVVNN 246

Query: 148 ALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTW 207
            L+ +Y KFS    AR+VFD+M  +D+V +N+MI G +K    ++S+ +F + +      
Sbjct: 247 GLLAMYLKFSRPTDARRVFDEMVVRDSVTYNTMICGYLKLEMVEESVKMFLENLDQFKP- 305

Query: 208 LDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELL 267
            D  +V +VL A   +++L L   I    L+ GF     V   L+  Y+KCG++  A  +
Sbjct: 306 -DILTVTSVLCACGHLRDLSLAKYIYNYMLRAGFVLESTVKNILIDVYAKCGDMITARDV 364

Query: 268 FRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHL 327
           F  +   D +S N++ISGY  +G    +++LF+ ++   E+ +  T + LI +      L
Sbjct: 365 FNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISLSTRLADL 424

Query: 328 HLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGY 387
                +HS  +KSGI  + SV  AL  +Y++  E+  + K+F+        +WN +I+  
Sbjct: 425 KFGKGLHSNGIKSGIYIDLSVSNALIDMYAKCGEVGDSLKIFNSMGTLDTVTWNTVISAC 484

Query: 388 TQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNI 447
            + G     + +  +M+ +KV P+  T    L  CA L A  LGK +H  +    +ES +
Sbjct: 485 VRFGDFATGLQVTTQMRKNKVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESEL 544

Query: 448 YVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHS 507
            +  ALI+MY+KCG +  +  +F+ MS +  VTW  MI  YG++G G +AL+ F +M  S
Sbjct: 545 QIGNALIEMYSKCGCLESSFRVFERMSRRDVVTWTGMIYAYGMYGEGEKALESFVDMEKS 604

Query: 508 GIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEK 567
           GI P  V F++++YACSH+GLV +G   F+ M   +   P+ EHYAC+VD+L R+ ++ K
Sbjct: 605 GIVPDSVVFIALIYACSHSGLVEKGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISK 664

Query: 568 ALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSA 627
           A EFI+ + +EP  ++W ++L AC    D   A   S ++ EL+P++ GY +L SN Y+A
Sbjct: 665 AEEFIQAMPIEPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILASNAYAA 724

Query: 628 ERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGK 687
            R + + + +R+ V+ + + K PG + IE+G   HVF SGD   PQS AI+  LE L   
Sbjct: 725 LRKWDKVSLIRKSVRDKHIKKNPGYSWIEIGKKVHVFCSGDDSAPQSEAIHKSLEILYSL 784

Query: 688 MREAGFQTETVTALHDV-EEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLD 746
           M + G+  ++     ++ EEEEK  ++  HSE+LAIAFGL+ TEPGT ++++KNLRVC D
Sbjct: 785 MAKEGYIPDSREVSQNLEEEEEKRRLICGHSERLAIAFGLLNTEPGTPLQVMKNLRVCSD 844

Query: 747 CHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           CH  TK ISK+ GR I+VRDANRFH FK G+CSC D W
Sbjct: 845 CHEVTKLISKIVGREILVRDANRFHLFKDGICSCKDRW 882



 Score =  260 bits (665), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 175/582 (30%), Positives = 300/582 (51%), Gaps = 19/582 (3%)

Query: 3   MKTPQSRNLFLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARA 62
           M+T  S       L  +   ++L + HA +I  G         KL  + S F+A   + +
Sbjct: 1   MQTRVSSAFISRALSSSSNLNELRRIHALVISLGLDGSDFFSGKLIDKYSHFRAPASSLS 60

Query: 63  LFFSI-PKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASAC 121
           +F  + P  +++++N IIR FS N     ++ FY  LR+ + ++PD +T+  V+ A +  
Sbjct: 61  VFRRVSPAKNVYIWNSIIRAFSKNGWFPKALEFYGKLRE-SKVSPDKYTFPSVIKACAGL 119

Query: 122 CDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMI 181
            D  +G L++   +  G+ SDL+VG ALVD+Y +   +  AR+VFD+MP +D V WNS+I
Sbjct: 120 FDAEMGDLVYKQILEMGFESDLYVGNALVDMYSRMGLLSRARQVFDEMPVRDLVSWNSLI 179

Query: 182 SGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGF 241
           SG   +  +++++ ++ ++ RN     DS +V++VLPA A +  ++ G  +    LK G 
Sbjct: 180 SGYSSHGYYEEALEIYHEL-RNSWIVPDSFTVSSVLPAFANLLVVKQGQGLHGFTLKSGV 238

Query: 242 HDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQ 301
           +    V  GL++ Y K      A  +F ++V  D ++ N MI GY      E S+++F +
Sbjct: 239 NSVSVVNNGLLAMYLKFSRPTDARRVFDEMVVRDSVTYNTMICGYLKLEMVEESVKMFLE 298

Query: 302 LLASAERVNSSTIVGLIPVFYPFGHLH---LTNCIHSFCLKSGIVSNSSVLTALSTVYSR 358
            L   +      I+ +  V    GHL    L   I+++ L++G V  S+V   L  VY++
Sbjct: 299 NLDQFK----PDILTVTSVLCACGHLRDLSLAKYIYNYMLRAGFVLESTVKNILIDVYAK 354

Query: 359 LNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSI 418
             +M  AR +F+    K   SWN++I+GY Q+G   EA+ LF+ M   +   + +T   +
Sbjct: 355 CGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLML 414

Query: 419 LSACAQLGAISLGKWVHELVKSRNFESNIY----VSTALIDMYAKCGNIVEARELFDLMS 474
           +S   +L  +  GK +H    S   +S IY    VS ALIDMYAKCG + ++ ++F+ M 
Sbjct: 415 ISLSTRLADLKFGKGLH----SNGIKSGIYIDLSVSNALIDMYAKCGEVGDSLKIFNSMG 470

Query: 475 HKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDE 534
               VTWNT+IS     G     LQ+ ++M  + + P   TFL  L  C+     R G E
Sbjct: 471 TLDTVTWNTVISACVRFGDFATGLQVTTQMRKNKVVPDMATFLVTLPMCASLAAKRLGKE 530

Query: 535 IFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLA 576
           I   ++   G++   +    ++++  + G LE +    + ++
Sbjct: 531 IHCCLLR-FGYESELQIGNALIEMYSKCGCLESSFRVFERMS 571


>gi|449438556|ref|XP_004137054.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g16860-like [Cucumis sativus]
 gi|449479088|ref|XP_004155501.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g16860-like [Cucumis sativus]
          Length = 855

 Score =  492 bits (1266), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 286/827 (34%), Positives = 453/827 (54%), Gaps = 58/827 (7%)

Query: 12  FLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFS-IPK- 69
            +SLL+  KT       H QI +HGF    S          +  A+  A +L    IP  
Sbjct: 33  LISLLRQCKTLINAKLAHQQIFVHGFTEMFSYAVG---AYIECGASAEAVSLLQRLIPSH 89

Query: 70  PDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVL 129
             +F +N +IR      +   ++ FY  +++   L PD++T+ FVL A         G  
Sbjct: 90  STVFWWNALIRRSVKLGLLDDTLGFYCQMQRLGWL-PDHYTFPFVLKACGEIPSLRHGAS 148

Query: 130 LHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEK---DTVLWNSMISGLMK 186
           +H     +G GS++F+  ++V +Y +   +  A ++FD++ E+   D V WNS+++  ++
Sbjct: 149 VHAIVCANGLGSNVFICNSIVAMYGRCGALDDAHQMFDEVLERKIEDIVSWNSILAAYVQ 208

Query: 187 NCCFQDSIWVFGDMVRNGGTWL--DSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDH 244
               + ++ +   M  +    L  D+ ++  +LPA A V  L+ G ++    ++ G  D 
Sbjct: 209 GGQSRTALRIAFRMGNHYSLKLRPDAITLVNILPACASVFALQHGKQVHGFSVRNGLVDD 268

Query: 245 VYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLA 304
           V+V   LVS Y+KC ++  A  +F  I + D++S NAM++GY+  G  +S+L LF+ +  
Sbjct: 269 VFVGNALVSMYAKCSKMNEANKVFEGIKKKDVVSWNAMVTGYSQIGSFDSALSLFKMMQE 328

Query: 305 SAERVNSSTIVGLIPVFYPFGH----LHLTNCIHSFCLKSGIVSNSSVLTALSTV----- 355
              +++  T   +I  +   GH    L +   +  + L+  +V+ +S+L+  ++V     
Sbjct: 329 EDIKLDVITWSAVIAGYAQKGHGFEALDVFRQMQLYGLEPNVVTLASLLSGCASVGALLY 388

Query: 356 ---------------------------------YSRLNEMEAARKLFD--ESSEKSLASW 380
                                            Y++      AR +FD  E  +K++ +W
Sbjct: 389 GKQTHAYVIKNILNLNWNDKEDDLLVLNGLIDMYAKCKSYRVARSIFDSIEGKDKNVVTW 448

Query: 381 NAMIAGYTQNGLTEEAISLFQEM--QASKVAPNPVTVSSILSACAQLGAISLGKWVHEL- 437
             MI GY Q+G   +A+ LF ++  Q + + PN  T+S  L ACA+LG + LG+ +H   
Sbjct: 449 TVMIGGYAQHGEANDALKLFAQIFKQKTSLKPNAFTLSCALMACARLGELRLGRQLHAYA 508

Query: 438 VKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEA 497
           +++ N    +YV   LIDMY+K G+I  AR +FD M  ++ V+W ++++GYG+HG G EA
Sbjct: 509 LRNENESEVLYVGNCLIDMYSKSGDIDAARAVFDNMKLRNVVSWTSLMTGYGMHGRGEEA 568

Query: 498 LQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVD 557
           L LF +M   G    G+TFL VLYACSH+G+V +G   F  M+   G  P AEHYACMVD
Sbjct: 569 LHLFDQMQKLGFAVDGITFLVVLYACSHSGMVDQGMIYFHDMVKGFGITPGAEHYACMVD 628

Query: 558 ILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGY 617
           +LGRAG+L +A+E IK +++EP   VW ALL A  IH +  L   A+ KL EL  EN G 
Sbjct: 629 LLGRAGRLNEAMELIKNMSMEPTAVVWVALLSASRIHANIELGEYAASKLTELGAENDGS 688

Query: 618 HVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAI 677
           + LLSN+Y+  R +   A +R ++K   + K PGC+ I+   +   F  GD+ HP+S  I
Sbjct: 689 YTLLSNLYANARRWKDVARIRSLMKHTGIRKRPGCSWIQGKKSTTTFFVGDRSHPESEQI 748

Query: 678 YAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRI 737
           Y +L  L  ++++ G+  +T  ALHDV++EEK  ++  HSEKLA+A+G++ T PG  IRI
Sbjct: 749 YNLLLDLIKRIKDMGYVPQTSFALHDVDDEEKGDLLFEHSEKLAVAYGILTTAPGQPIRI 808

Query: 738 IKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
            KNLR+C DCH+A  +IS +    IV+RD++RFHHFK G CSC  YW
Sbjct: 809 HKNLRICGDCHSALTYISMIIDHEIVLRDSSRFHHFKKGSCSCRSYW 855



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 92/386 (23%), Positives = 169/386 (43%), Gaps = 65/386 (16%)

Query: 211 TSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRD 270
           T+    +P ++ +++ +  +  +    ++  H    + +  V  Y +CG    A  L + 
Sbjct: 25  TTSPPTIPLISLLRQCKTLINAKLAHQQIFVHGFTEMFSYAVGAYIECGASAEAVSLLQR 84

Query: 271 IV--RPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLH 328
           ++     +   NA+I      G  + +L  + Q+    +R+      G +P  Y F  + 
Sbjct: 85  LIPSHSTVFWWNALIRRSVKLGLLDDTLGFYCQM----QRL------GWLPDHYTFPFV- 133

Query: 329 LTNC-----------IHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEK-- 375
           L  C           +H+    +G+ SN  +  ++  +Y R   ++ A ++FDE  E+  
Sbjct: 134 LKACGEIPSLRHGASVHAIVCANGLGSNVFICNSIVAMYGRCGALDDAHQMFDEVLERKI 193

Query: 376 -SLASWNAMIAGYTQNGLTEEAISLFQEM---QASKVAPNPVTVSSILSACAQLGAISLG 431
             + SWN+++A Y Q G +  A+ +   M    + K+ P+ +T+ +IL ACA + A+  G
Sbjct: 194 EDIVSWNSILAAYVQGGQSRTALRIAFRMGNHYSLKLRPDAITLVNILPACASVFALQHG 253

Query: 432 KWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTM------- 484
           K VH          +++V  AL+ MYAKC  + EA ++F+ +  K  V+WN M       
Sbjct: 254 KQVHGFSVRNGLVDDVFVGNALVSMYAKCSKMNEANKVFEGIKKKDVVSWNAMVTGYSQI 313

Query: 485 ----------------------------ISGYGLHGHGLEALQLFSEMLHSGIRPSGVTF 516
                                       I+GY   GHG EAL +F +M   G+ P+ VT 
Sbjct: 314 GSFDSALSLFKMMQEEDIKLDVITWSAVIAGYAQKGHGFEALDVFRQMQLYGLEPNVVTL 373

Query: 517 LSVLYACSHAGLVREGDEIFQSMIHD 542
            S+L  C+  G +  G +    +I +
Sbjct: 374 ASLLSGCASVGALLYGKQTHAYVIKN 399


>gi|359495515|ref|XP_002265720.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g25060, mitochondrial-like [Vitis vinifera]
          Length = 678

 Score =  491 bits (1265), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 253/655 (38%), Positives = 393/655 (60%), Gaps = 2/655 (0%)

Query: 130 LHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCC 189
           +H   I++G        A L+  Y +   ++SAR+VFDK P+     WN+MI    +   
Sbjct: 26  IHALMILTGIFGHGNSNAKLIQSYARLGHIESARQVFDKSPQCGVDAWNAMIIAYSRRGA 85

Query: 190 FQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLT 249
             +++ ++  M   G    DS++   VL A     +LR G E     +  G+ D V+V  
Sbjct: 86  MFEALSLYHRMASEG-VRPDSSTYTVVLKACTRSLDLRSGEETWRQAVDQGYGDDVFVGA 144

Query: 250 GLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERV 309
            +++ Y+KCG+++ A  +F  + R DL+    MI+G   NG+   ++ ++RQ+       
Sbjct: 145 AVLNLYAKCGKMDEAMRVFDKMGRRDLVCWTTMITGLAQNGQAREAVDIYRQMHKKRVEG 204

Query: 310 NSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLF 369
           +   ++GLI      GH  +   IH + ++  I+ +  V T+L  +Y++   +E A  +F
Sbjct: 205 DGVVMLGLIQACTTLGHSKMGLSIHGYMIRKDIIMDVIVQTSLVDMYAKNGHLELASCVF 264

Query: 370 DESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAIS 429
                K++ SW+A+I+G+ QNG    A+ L  +MQ+    P+ V++ S+L AC+Q+G + 
Sbjct: 265 RRMLYKNVISWSALISGFAQNGFAGNALQLVVDMQSFGYKPDSVSLVSVLLACSQVGFLK 324

Query: 430 LGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYG 489
           LGK VH  +  R    +   STA+IDMY+KCG++  AR +FD +S +  ++WN +I+ YG
Sbjct: 325 LGKSVHGYI-VRRLHFDCVSSTAVIDMYSKCGSLSFARTVFDQISFRDSISWNAIIASYG 383

Query: 490 LHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLA 549
           +HG G EAL LF +M  + ++P   TF S+L A SH+GLV +G   F  M++++  +P  
Sbjct: 384 IHGSGEEALSLFLQMRETNVKPDHATFASLLSAFSHSGLVEKGRYWFSIMVNEYKIQPSE 443

Query: 550 EHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFE 609
           +HYACMVD+L RAG++E+A E I+ +  EPG A+W ALL  C+ H    +  +A++K+ E
Sbjct: 444 KHYACMVDLLSRAGRVEEAQELIESMITEPGIAIWVALLSGCLNHGKFLIGEMAAKKVLE 503

Query: 610 LDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQ 669
           L+P++ G + L+SN ++  R + + A VR+++KK  + K PG +++EV G  H F   D+
Sbjct: 504 LNPDDPGIYSLVSNFFATARRWDEVAEVRKIMKKTGMKKVPGYSVMEVNGKLHAFLMEDK 563

Query: 670 LHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIAT 729
            H Q   I  +L KL+ +M+  G+  +T   LH++EEE KE M+  HSE+LAIAFGL+ T
Sbjct: 564 SHHQYEEIMQVLGKLDYEMKAMGYVPKTEFVLHNLEEEVKERMLCNHSERLAIAFGLLNT 623

Query: 730 EPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
            PGT + I KNLRVC DCH ATKFISK+  R IVVRD  RFHHFK GVCSCGDYW
Sbjct: 624 GPGTRLLITKNLRVCGDCHEATKFISKIVNREIVVRDVKRFHHFKDGVCSCGDYW 678



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 134/484 (27%), Positives = 247/484 (51%), Gaps = 11/484 (2%)

Query: 14  SLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLF 73
           +LL  +K +  + + HA +I+ G     ++  KL    +       AR +F   P+  + 
Sbjct: 12  TLLITSKDEPTIAKIHALMILTGIFGHGNSNAKLIQSYARLGHIESARQVFDKSPQCGVD 71

Query: 74  LFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGH 133
            +N +I  +S       ++  Y H   +  + PD+ TY+ VL A +   D   G      
Sbjct: 72  AWNAMIIAYSRRGAMFEALSLY-HRMASEGVRPDSSTYTVVLKACTRSLDLRSGEETWRQ 130

Query: 134 AIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDS 193
           A+  GYG D+FVGAA+++LY K   +  A +VFDKM  +D V W +MI+GL +N   +++
Sbjct: 131 AVDQGYGDDVFVGAAVLNLYAKCGKMDEAMRVFDKMGRRDLVCWTTMITGLAQNGQAREA 190

Query: 194 IWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVS 253
           + ++  M +      D   +  ++ A   +   ++G+ I    ++      V V T LV 
Sbjct: 191 VDIYRQMHKK-RVEGDGVVMLGLIQACTTLGHSKMGLSIHGYMIRKDIIMDVIVQTSLVD 249

Query: 254 FYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSST 313
            Y+K G +E A  +FR ++  ++IS +A+ISG+  NG   ++L+L   + +   + +S +
Sbjct: 250 MYAKNGHLELASCVFRRMLYKNVISWSALISGFAQNGFAGNALQLVVDMQSFGYKPDSVS 309

Query: 314 IVGLIPVFYPFGHLHLTNCIHSFCLKS---GIVSNSSVLTALSTVYSRLNEMEAARKLFD 370
           +V ++      G L L   +H + ++      VS+++V+     +YS+   +  AR +FD
Sbjct: 310 LVSVLLACSQVGFLKLGKSVHGYIVRRLHFDCVSSTAVI----DMYSKCGSLSFARTVFD 365

Query: 371 ESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISL 430
           + S +   SWNA+IA Y  +G  EEA+SLF +M+ + V P+  T +S+LSA +  G +  
Sbjct: 366 QISFRDSISWNAIIASYGIHGSGEEALSLFLQMRETNVKPDHATFASLLSAFSHSGLVEK 425

Query: 431 GK-WVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFD-LMSHKSEVTWNTMISGY 488
           G+ W   +V     + +      ++D+ ++ G + EA+EL + +++      W  ++SG 
Sbjct: 426 GRYWFSIMVNEYKIQPSEKHYACMVDLLSRAGRVEEAQELIESMITEPGIAIWVALLSGC 485

Query: 489 GLHG 492
             HG
Sbjct: 486 LNHG 489


>gi|359482004|ref|XP_002276764.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g01510-like [Vitis vinifera]
          Length = 681

 Score =  491 bits (1264), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 252/659 (38%), Positives = 394/659 (59%), Gaps = 2/659 (0%)

Query: 127 GVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMK 186
           G  LH   I +GY    F+   LV++Y K   +  A K+FD MP+++ V W +MISGL +
Sbjct: 24  GKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLFDTMPQRNLVSWTAMISGLSQ 83

Query: 187 NCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVY 246
           N  F ++I  F  M R  G      + ++ + A A +  + +G ++ CL LK G    ++
Sbjct: 84  NSKFSEAIRTFCGM-RICGEVPTQFAFSSAIRACASLGSIEMGKQMHCLALKFGIGSELF 142

Query: 247 VLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASA 306
           V + L   YSKCG +  A  +F ++   D +S  AMI GY+  G+ E +L  F++++   
Sbjct: 143 VGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDEE 202

Query: 307 ERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAAR 366
             ++   +   +              +HS  +K G  S+  V  AL+ +YS+  +ME+A 
Sbjct: 203 VTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESAS 262

Query: 367 KLFDESSE-KSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQL 425
            +F   SE +++ S+  +I GY +    E+ +S+F E++   + PN  T SS++ ACA  
Sbjct: 263 NVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQ 322

Query: 426 GAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMI 485
            A+  G  +H  V   NF+ + +VS+ L+DMY KCG + +A + FD +   +E+ WN+++
Sbjct: 323 AALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQAIQAFDEIGDPTEIAWNSLV 382

Query: 486 SGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGF 545
           S +G HG G +A+++F  M+  G++P+ +TF+S+L  CSHAGLV EG + F SM   +G 
Sbjct: 383 SVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDYFYSMDKTYGV 442

Query: 546 KPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASE 605
            P  EHY+C++D+LGRAG+L++A EFI  +  EP    W + LGAC IH D  + ++A+E
Sbjct: 443 VPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFLGACRIHGDKEMGKLAAE 502

Query: 606 KLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFT 665
           KL +L+P+N G  VLLSNIY+ ER +    +VR  ++   + K PG + ++VG   HVF 
Sbjct: 503 KLVKLEPKNSGALVLLSNIYANERQWEDVRSVRMRMRDGNVKKLPGYSWVDVGYKTHVFG 562

Query: 666 SGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFG 725
           + D  HP+ +AIY  L+ L  +++ AG+   T +   D+++  KE ++  HSE++A+AF 
Sbjct: 563 AEDWSHPRKSAIYEKLDTLLDQIKAAGYVPRTDSVPLDMDDSMKEKLLHRHSERIAVAFA 622

Query: 726 LIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           LI+   G  I + KNLRVC+DCH+A KFISKVTGR I+VRD +RFHHF  G CSCGDYW
Sbjct: 623 LISMPIGKPIIVKKNLRVCVDCHSAIKFISKVTGRKIIVRDNSRFHHFTDGSCSCGDYW 681



 Score =  178 bits (452), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 118/382 (30%), Positives = 194/382 (50%), Gaps = 5/382 (1%)

Query: 209 DSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLF 268
           D+ ++A V+   A+ + LR G ++  L +  G+    ++   LV+ YSKCGE++ A  LF
Sbjct: 4   DTNALAHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLF 63

Query: 269 RDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLH 328
             + + +L+S  AMISG + N K   ++R F  +    E          I      G + 
Sbjct: 64  DTMPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIE 123

Query: 329 LTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYT 388
           +   +H   LK GI S   V + L  +YS+   M  A K+F+E   K   SW AMI GY+
Sbjct: 124 MGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYS 183

Query: 389 QNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIY 448
           + G  EEA+  F++M   +V  +   + S L AC  L A   G+ VH  V    FES+I+
Sbjct: 184 KIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIF 243

Query: 449 VSTALIDMYAKCGNIVEARELFDLMSH-KSEVTWNTMISGYGLHGHGLEALQLFSEMLHS 507
           V  AL DMY+K G++  A  +F + S  ++ V++  +I GY       + L +F E+   
Sbjct: 244 VGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQ 303

Query: 508 GIRPSGVTFLSVLYACSHAGLVREGDEIF-QSMIHDHGFKPLAEHYACMVDILGRAGQLE 566
           GI P+  TF S++ AC++   + +G ++  Q M  +    P     + +VD+ G+ G LE
Sbjct: 304 GIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVS--SILVDMYGKCGLLE 361

Query: 567 KALEFIKGLAVEPGPAVWGALL 588
           +A++    +  +P    W +L+
Sbjct: 362 QAIQAFDEIG-DPTEIAWNSLV 382



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 126/473 (26%), Positives = 223/473 (47%), Gaps = 13/473 (2%)

Query: 27  QTHAQIIIHGFQNDLSTVTKLAHRLSDFKATC----YARALFFSIPKPDLFLFNVIIRGF 82
           Q HA +I  G+    +  T L + L +  + C    +A  LF ++P+ +L  +  +I G 
Sbjct: 26  QLHALLICAGY----TPCTFLTNHLVNMYSKCGELDHALKLFDTMPQRNLVSWTAMISGL 81

Query: 83  SNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSD 142
           S N     +I  +  +R      P  F +S  + A ++     +G  +H  A+  G GS+
Sbjct: 82  SQNSKFSEAIRTFCGMRI-CGEVPTQFAFSSAIRACASLGSIEMGKQMHCLALKFGIGSE 140

Query: 143 LFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVR 202
           LFVG+ L D+Y K   +  A KVF++MP KD V W +MI G  K   F++++  F  M+ 
Sbjct: 141 LFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEEALLAFKKMID 200

Query: 203 NGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVE 262
              T +D   + + L A   ++  + G  +    +KLGF   ++V   L   YSK G++E
Sbjct: 201 EEVT-IDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDME 259

Query: 263 RAELLFR-DIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVF 321
            A  +F  D    +++S   +I GY    + E  L +F +L       N  T   LI   
Sbjct: 260 SASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKAC 319

Query: 322 YPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWN 381
                L     +H+  +K     +  V + L  +Y +   +E A + FDE  + +  +WN
Sbjct: 320 ANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQAIQAFDEIGDPTEIAWN 379

Query: 382 AMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLG-KWVHELVKS 440
           ++++ + Q+GL ++AI +F+ M    V PN +T  S+L+ C+  G +  G  + + + K+
Sbjct: 380 SLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDYFYSMDKT 439

Query: 441 RNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEV-TWNTMISGYGLHG 492
                     + +ID+  + G + EA+E  + M  +     W + +    +HG
Sbjct: 440 YGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFLGACRIHG 492


>gi|15228590|ref|NP_187008.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207453|sp|Q9SS60.1|PP210_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g03580
 gi|6091764|gb|AAF03474.1|AC009327_13 hypothetical protein [Arabidopsis thaliana]
 gi|28393735|gb|AAO42278.1| unknown protein [Arabidopsis thaliana]
 gi|29824355|gb|AAP04138.1| unknown protein [Arabidopsis thaliana]
 gi|332640438|gb|AEE73959.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 882

 Score =  491 bits (1264), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 284/758 (37%), Positives = 432/758 (56%), Gaps = 4/758 (0%)

Query: 28  THAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNEM 87
            + QI+  GF++DL     L    S       AR +F  +P  DL  +N +I G+S++  
Sbjct: 128 VYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGY 187

Query: 88  PKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGA 147
            + ++  Y H  KN+ + PD+FT S VL A         G  LHG A+ SG  S + V  
Sbjct: 188 YEEALEIY-HELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNN 246

Query: 148 ALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTW 207
            LV +Y KF     AR+VFD+M  +D+V +N+MI G +K    ++S+ +F + +      
Sbjct: 247 GLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQFKP- 305

Query: 208 LDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELL 267
            D  +V++VL A   +++L L   I    LK GF     V   L+  Y+KCG++  A  +
Sbjct: 306 -DLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDV 364

Query: 268 FRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHL 327
           F  +   D +S N++ISGY  +G    +++LF+ ++   E+ +  T + LI V      L
Sbjct: 365 FNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADL 424

Query: 328 HLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGY 387
                +HS  +KSGI  + SV  AL  +Y++  E+  + K+F         +WN +I+  
Sbjct: 425 KFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISAC 484

Query: 388 TQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNI 447
            + G     + +  +M+ S+V P+  T    L  CA L A  LGK +H  +    +ES +
Sbjct: 485 VRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESEL 544

Query: 448 YVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHS 507
            +  ALI+MY+KCG +  +  +F+ MS +  VTW  MI  YG++G G +AL+ F++M  S
Sbjct: 545 QIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKS 604

Query: 508 GIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEK 567
           GI P  V F++++YACSH+GLV EG   F+ M   +   P+ EHYAC+VD+L R+ ++ K
Sbjct: 605 GIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISK 664

Query: 568 ALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSA 627
           A EFI+ + ++P  ++W ++L AC    D   A   S ++ EL+P++ GY +L SN Y+A
Sbjct: 665 AEEFIQAMPIKPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILASNAYAA 724

Query: 628 ERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGK 687
            R + + + +R+ +K + + K PG + IEVG   HVF+SGD   PQS AIY  LE L   
Sbjct: 725 LRKWDKVSLIRKSLKDKHITKNPGYSWIEVGKNVHVFSSGDDSAPQSEAIYKSLEILYSL 784

Query: 688 MREAGFQTETVTALHDV-EEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLD 746
           M + G+  +      ++ EEEEK  ++  HSE+LAIAFGL+ TEPGT ++++KNLRVC D
Sbjct: 785 MAKEGYIPDPREVSQNLEEEEEKRRLICGHSERLAIAFGLLNTEPGTPLQVMKNLRVCGD 844

Query: 747 CHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           CH  TK ISK+ GR I+VRDANRFH FK G CSC D W
Sbjct: 845 CHEVTKLISKIVGREILVRDANRFHLFKDGTCSCKDRW 882



 Score =  251 bits (642), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 174/570 (30%), Positives = 293/570 (51%), Gaps = 11/570 (1%)

Query: 3   MKTPQSRNLFLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARA 62
           M+T  S       L  +   ++L + HA +I  G  +      KL  + S F+    + +
Sbjct: 1   MQTRVSSPFISRALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLS 60

Query: 63  LFFSI-PKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASAC 121
           +F  + P  +++L+N IIR FS N +   ++ FY  LR+ + ++PD +T+  V+ A +  
Sbjct: 61  VFRRVSPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRE-SKVSPDKYTFPSVIKACAGL 119

Query: 122 CDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMI 181
            D  +G L++   +  G+ SDLFVG ALVD+Y +   +  AR+VFD+MP +D V WNS+I
Sbjct: 120 FDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLI 179

Query: 182 SGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGF 241
           SG   +  +++++ ++ ++ +N     DS +V++VLPA   +  ++ G  +    LK G 
Sbjct: 180 SGYSSHGYYEEALEIYHEL-KNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGV 238

Query: 242 HDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQ 301
           +  V V  GLV+ Y K      A  +F ++   D +S N MI GY      E S+R+F +
Sbjct: 239 NSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLE 298

Query: 302 LLASAERVNSSTIVGLIPVFYPFGHLH---LTNCIHSFCLKSGIVSNSSVLTALSTVYSR 358
            L   +      ++ +  V    GHL    L   I+++ LK+G V  S+V   L  VY++
Sbjct: 299 NLDQFK----PDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAK 354

Query: 359 LNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSI 418
             +M  AR +F+    K   SWN++I+GY Q+G   EA+ LF+ M   +   + +T   +
Sbjct: 355 CGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLML 414

Query: 419 LSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSE 478
           +S   +L  +  GK +H          ++ VS ALIDMYAKCG + ++ ++F  M     
Sbjct: 415 ISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDT 474

Query: 479 VTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQS 538
           VTWNT+IS     G     LQ+ ++M  S + P   TFL  L  C+     R G EI   
Sbjct: 475 VTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCC 534

Query: 539 MIHDHGFKPLAEHYACMVDILGRAGQLEKA 568
           ++   G++   +    ++++  + G LE +
Sbjct: 535 LLR-FGYESELQIGNALIEMYSKCGCLENS 563



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 101/372 (27%), Positives = 175/372 (47%), Gaps = 8/372 (2%)

Query: 206 TWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAE 265
           T + S  ++  L + + + ELR    I  L + LG     +    L+  YS   E   + 
Sbjct: 3   TRVSSPFISRALSSSSNLNELR---RIHALVISLGLDSSDFFSGKLIDKYSHFREPASSL 59

Query: 266 LLFRDIVRP--DLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYP 323
            +FR  V P  ++   N++I  ++ NG    +L  + +L  S    +  T   +I     
Sbjct: 60  SVFRR-VSPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAG 118

Query: 324 FGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAM 383
                + + ++   L  G  S+  V  AL  +YSR+  +  AR++FDE   + L SWN++
Sbjct: 119 LFDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSL 178

Query: 384 IAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNF 443
           I+GY+ +G  EEA+ ++ E++ S + P+  TVSS+L A   L  +  G+ +H        
Sbjct: 179 ISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGV 238

Query: 444 ESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSE 503
            S + V+  L+ MY K     +AR +FD M  +  V++NTMI GY       E++++F E
Sbjct: 239 NSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLE 298

Query: 504 MLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAG 563
            L    +P  +T  SVL AC H   +     I+  M+   GF   +     ++D+  + G
Sbjct: 299 NLDQ-FKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLK-AGFVLESTVRNILIDVYAKCG 356

Query: 564 QLEKALEFIKGL 575
            +  A +    +
Sbjct: 357 DMITARDVFNSM 368


>gi|225445386|ref|XP_002281711.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic [Vitis vinifera]
          Length = 711

 Score =  491 bits (1264), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 254/623 (40%), Positives = 377/623 (60%), Gaps = 4/623 (0%)

Query: 162 ARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVA 221
           AR VF+++P   T   NS+I G       + +I  +  M+  G    D  +  ++  +  
Sbjct: 93  ARLVFNQIPNPTTFTCNSIIRGYTNKNLPRQAILFYQLMMLQGLD-PDRFTFPSLFKSCG 151

Query: 222 EVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNA 281
            + E   G ++ C   KLGF    Y+   L++ YS CG +  A  +F  +V   ++S   
Sbjct: 152 VLCE---GKQLHCHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKSVVSWAT 208

Query: 282 MISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSG 341
           MI  Y        +++LFR++  ++ + N  T+V ++        L     +H +  ++G
Sbjct: 209 MIGAYAQWDLPHEAIKLFRRMEIASVKPNEITLVNVLTACARSRDLETAKQVHKYIDETG 268

Query: 342 IVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQ 401
           I  ++ + +AL  VY +      AR LF++  EK+L  WN MI G+ ++   EEA+SLF 
Sbjct: 269 IGFHTVLTSALMDVYCKCGCYPLARDLFNKMPEKNLFCWNIMINGHVEDSDYEEALSLFN 328

Query: 402 EMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCG 461
           EMQ S V  + VT++S+L AC  LGA+ LGKW+H  ++    E ++ + TAL+DMYAKCG
Sbjct: 329 EMQLSGVKGDKVTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCG 388

Query: 462 NIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLY 521
           +I  A  +F  M  K  +TW  +I G  + G GL+AL+LF EM  S ++P  +TF+ VL 
Sbjct: 389 SIESAMRVFQEMPEKDVMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVGVLA 448

Query: 522 ACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGP 581
           ACSHAGLV EG   F SM + +G +P  EHY CMVD+LGRAG++ +A + I+ + + P  
Sbjct: 449 ACSHAGLVNEGIAYFNSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAEDLIQNMPMAPDY 508

Query: 582 AVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVV 641
            V   LL AC IH +  +A  A+++L ELDP+N G +VLLSNIYS+ +++  A  +R+++
Sbjct: 509 FVLVGLLSACRIHGNLVVAERAAQQLIELDPKNGGTYVLLSNIYSSMKNWEAAKKMRELM 568

Query: 642 KKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTAL 701
            +R + K PGC+ IEVGG  H F  GD  HPQS+ IY  L+ +  +++ AG+  +    L
Sbjct: 569 VERNIKKPPGCSAIEVGGVVHEFVKGDVSHPQSSEIYETLDDMMRRLKSAGYVPDKSEVL 628

Query: 702 HDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRV 761
            D++E+EKE  + +HSEKLAIAFGL++T PGT IR++KNLRVC DCH+A KFIS+V  R 
Sbjct: 629 FDMDEKEKENELSLHSEKLAIAFGLLSTTPGTPIRVVKNLRVCSDCHSAMKFISEVYNRE 688

Query: 762 IVVRDANRFHHFKGGVCSCGDYW 784
           I+VRD NRFHHF  G CSC D+W
Sbjct: 689 IIVRDRNRFHHFTKGSCSCRDFW 711



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 144/512 (28%), Positives = 244/512 (47%), Gaps = 10/512 (1%)

Query: 16  LKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAH--RLSDFKATCYARALFFSIPKPDLF 73
           L+   T SQL Q HAQ++      D  + +K+     L D  +  YAR +F  IP P  F
Sbjct: 47  LEKCTTMSQLKQIHAQMLRTCLFVDPFSASKIVAFCALHDSGSLPYARLVFNQIPNPTTF 106

Query: 74  LFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGH 133
             N IIRG++N  +P+ +I FY  L     L PD FT+  +  +    C+   G  LH H
Sbjct: 107 TCNSIIRGYTNKNLPRQAILFY-QLMMLQGLDPDRFTFPSLFKSCGVLCE---GKQLHCH 162

Query: 134 AIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDS 193
           +   G+ SD ++   L+++Y     + SARKVFDKM  K  V W +MI    +     ++
Sbjct: 163 STKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKSVVSWATMIGAYAQWDLPHEA 222

Query: 194 IWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVS 253
           I +F  M        +  ++  VL A A  ++L    ++     + G   H  + + L+ 
Sbjct: 223 IKLFRRM-EIASVKPNEITLVNVLTACARSRDLETAKQVHKYIDETGIGFHTVLTSALMD 281

Query: 254 FYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSST 313
            Y KCG    A  LF  +   +L   N MI+G+  +   E +L LF ++  S  + +  T
Sbjct: 282 VYCKCGCYPLARDLFNKMPEKNLFCWNIMINGHVEDSDYEEALSLFNEMQLSGVKGDKVT 341

Query: 314 IVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESS 373
           +  L+      G L L   +H +  K  I  + ++ TAL  +Y++   +E+A ++F E  
Sbjct: 342 MASLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSIESAMRVFQEMP 401

Query: 374 EKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLG-K 432
           EK + +W A+I G    G   +A+ LF EMQ S+V P+ +T   +L+AC+  G ++ G  
Sbjct: 402 EKDVMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVGVLAACSHAGLVNEGIA 461

Query: 433 WVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSE-VTWNTMISGYGLH 491
           + + +      + +I     ++DM  + G I EA +L   M    +      ++S   +H
Sbjct: 462 YFNSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAEDLIQNMPMAPDYFVLVGLLSACRIH 521

Query: 492 GHGLEALQLFSEMLHSGIRPSGV-TFLSVLYA 522
           G+ + A +   +++    +  G    LS +Y+
Sbjct: 522 GNLVVAERAAQQLIELDPKNGGTYVLLSNIYS 553



 Score =  119 bits (298), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 110/471 (23%), Positives = 207/471 (43%), Gaps = 38/471 (8%)

Query: 8   SRNLFLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSI 67
            R  F SL K      +  Q H      GF +D      L +  S+      AR +F  +
Sbjct: 139 DRFTFPSLFKSCGVLCEGKQLHCHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKM 198

Query: 68  PKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIG 127
               +  +  +I  ++  ++P  +I  +  + +  ++ P+  T   VL+A +   D    
Sbjct: 199 VNKSVVSWATMIGAYAQWDLPHEAIKLFRRM-EIASVKPNEITLVNVLTACARSRDLETA 257

Query: 128 VLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKN 187
             +H +   +G G    + +AL+D+Y K      AR +F+KMPEK+   WN MI+G +++
Sbjct: 258 KQVHKYIDETGIGFHTVLTSALMDVYCKCGCYPLARDLFNKMPEKNLFCWNIMINGHVED 317

Query: 188 CCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYV 247
             +++++ +F +M +  G   D  ++A++L A   +  L LG  +     K      V +
Sbjct: 318 SDYEEALSLFNEM-QLSGVKGDKVTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVAL 376

Query: 248 LTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAE 307
            T LV  Y+KCG +E A  +F+++   D+++  A+I G    G+   +L LF ++  S  
Sbjct: 377 GTALVDMYAKCGSIESAMRVFQEMPEKDVMTWTALIVGLAMCGQGLKALELFHEMQMSEV 436

Query: 308 RVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARK 367
           + ++ T VG+           L  C H+  +  GI              +  N M     
Sbjct: 437 KPDAITFVGV-----------LAACSHAGLVNEGI--------------AYFNSMPNKYG 471

Query: 368 LFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGA 427
           +     + S+  +  M+    + G   EA  L Q M    +AP+   +  +LSAC   G 
Sbjct: 472 I-----QPSIEHYGCMVDMLGRAGRIAEAEDLIQNM---PMAPDYFVLVGLLSACRIHGN 523

Query: 428 ISLG-KWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKS 477
           + +  +   +L++        YV   L ++Y+   N   A+++ +LM  ++
Sbjct: 524 LVVAERAAQQLIELDPKNGGTYV--LLSNIYSSMKNWEAAKKMRELMVERN 572


>gi|307136183|gb|ADN34022.1| hypothetical protein [Cucumis melo subsp. melo]
          Length = 773

 Score =  491 bits (1264), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 284/798 (35%), Positives = 443/798 (55%), Gaps = 41/798 (5%)

Query: 3   MKTPQSRN-LFLSLLKGA---KTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRL-SDFKAT 57
           M++P S   L  SLL+     K++SQ  Q HAQ++   FQ        L   + S     
Sbjct: 1   MRSPTSTEALVNSLLRNPLSIKSRSQAQQLHAQVL--KFQASSLCNLSLLLSIYSHINLL 58

Query: 58  CYARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSA 117
             +  LF ++  P    +  +IR ++++ +P  S+  +  +   + L PD+  +  VL A
Sbjct: 59  HDSLRLFNTLHFPPALAWKSVIRCYTSHGLPHKSLGSFIGMLA-SGLYPDHNVFPSVLKA 117

Query: 118 ASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKS-------ARKVFDKMP 170
            +   D ++G  LHG+ I  G   DL+ G AL+++Y K  ++K        A +V D+M 
Sbjct: 118 CAMLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLKKSGRQRLGASQVLDEMT 177

Query: 171 EKDTVLWNSMISGLMKNCCFQDS-IWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELR-- 227
           E+   +  + +  L+ N   + S I  F   V       ++  +       +E +E+   
Sbjct: 178 ERTRSVRTASV--LVGNQGRKVSDIEAFNYDVSCRSREFEAQVLEIDYKPRSEYREMEAC 235

Query: 228 -LGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGY 286
            LG +I+ +                    S    V+    +F  +   DL+S N +I+G 
Sbjct: 236 NLGQQIKDI--------------------SHSMSVDSVRKIFEMMPEKDLVSWNTIIAGN 275

Query: 287 TCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNS 346
             NG    +L + R++  +  + +S T+  ++P+      +     IH   ++ G+ +  
Sbjct: 276 ARNGLYGETLTMVREMGGANLKPDSFTLSSVLPLIAENVDISKGKEIHGCSIRQGLDAEV 335

Query: 347 SVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQAS 406
            V ++L  +Y++   +  + ++F   +E+   SWN++IAG  QNGL +E +  F++M  +
Sbjct: 336 YVASSLIDMYAKCTRVVDSYRVFTLLTERDGISWNSIIAGCVQNGLFDEGLKFFRQMLMA 395

Query: 407 KVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEA 466
           K+ P   + SSI+ ACA L  + LGK +H  +    F+ NI+++++L+DMYAKCGNI  A
Sbjct: 396 KIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTA 455

Query: 467 RELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHA 526
           R++FD M  +  V+W  MI G  LHGH L+A++LF +M   GI P+ V F++VL ACSHA
Sbjct: 456 RQIFDRMRLRDMVSWTAMIMGCALHGHALDAIELFEQMKTEGIEPNYVAFMAVLTACSHA 515

Query: 527 GLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGA 586
           GLV E  + F SM  D G  P  EHYA + D+LGRAG+LE+A +FI G+ + P  +VW  
Sbjct: 516 GLVDEAWKYFNSMTLDFGIAPGVEHYAAVSDLLGRAGRLEEAYDFICGMPIGPTGSVWAT 575

Query: 587 LLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKL 646
           LL AC +HK+ ++A   + ++ E+DP+N G ++LL+NIYSA R + +AA  R  +++  +
Sbjct: 576 LLSACRVHKNVDMAEKVANRILEVDPKNTGAYILLANIYSAARRWKEAAKWRASLRRTGI 635

Query: 647 AKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEE 706
            K P C+ IEV    + F +GD+ HP    I   +E L   M + G+  +T    HDVEE
Sbjct: 636 RKTPACSWIEVRNKVYAFMAGDESHPCYEKIREAMEVLMELMEKEGYVPDTSEVHHDVEE 695

Query: 707 EEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRD 766
           E+K+ ++  HSE+LAI FG+I T  GT IR+ KNLRVC DCHTATKFISK+ GR IVVRD
Sbjct: 696 EQKKYLVCSHSERLAIVFGIINTPAGTTIRVTKNLRVCTDCHTATKFISKIVGREIVVRD 755

Query: 767 ANRFHHFKGGVCSCGDYW 784
            +RFHHFK G CSCGDYW
Sbjct: 756 NSRFHHFKNGTCSCGDYW 773


>gi|359487569|ref|XP_002277031.2| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
           mitochondrial-like [Vitis vinifera]
          Length = 703

 Score =  491 bits (1263), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 269/662 (40%), Positives = 403/662 (60%), Gaps = 35/662 (5%)

Query: 148 ALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMV-RNGGT 206
           ++V  YF+ +  + AR +FDKMPE++TV WN +ISG +KN    ++   F  M  RN  +
Sbjct: 52  SMVAGYFQNNRPREARYLFDKMPERNTVSWNGLISGYVKNRMVSEARKAFDTMPERNVVS 111

Query: 207 WLDSTSVAAVLPAVAEVQELRLGM----------------EIQCLGLKLGFHD-----HV 245
           W            V+E + L   M                +++ +    G  D      V
Sbjct: 112 WTAMVRGYVQEGLVSEAETLFWQMPEKNVVSWTVMLGGLIQVRRIDEARGLFDIMPVKDV 171

Query: 246 YVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLAS 305
              T ++S Y + G +  A  LF ++ R ++IS   MISGY  NG+ + + +LF  +   
Sbjct: 172 VARTNMISGYCQEGRLAEARELFDEMPRRNVISWTTMISGYVQNGQVDVARKLFEVMPEK 231

Query: 306 AERVNSSTIVGLIPVFYPFGHLH-LTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEA 364
            E   ++ ++G    +   G +   +    +  +K+ +  N+ +L      + +  E+  
Sbjct: 232 NEVSWTAMLMG----YTQGGRIEEASELFDAMPVKAVVACNAMILG-----FGQNGEVAK 282

Query: 365 ARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQ 424
           AR++FD+  EK   +W+AMI  Y + G   EA++LF  MQ   V  N  ++ S+LS CA 
Sbjct: 283 ARQVFDQIREKDDGTWSAMIKVYERKGFEVEALNLFALMQREGVQSNFPSLISVLSVCAS 342

Query: 425 LGAISLGKWVH-ELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNT 483
           L ++  G+ VH ELVKS+ F+S+++V++ LI MY KCG++V+AR++FD  S K  V WN+
Sbjct: 343 LASLDHGRQVHAELVKSQ-FDSDVFVASVLITMYVKCGDLVKARQIFDRFSPKDIVMWNS 401

Query: 484 MISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDH 543
           +I+GY  HG   EALQ+F EM  SG+   GVTF+ VL ACS+ G V+EG EIF+SM   +
Sbjct: 402 IITGYAQHGLVEEALQVFHEMCSSGMATDGVTFVGVLSACSYTGKVKEGLEIFESMKSKY 461

Query: 544 GFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVA 603
             +P  EHYACMVD+LGRAG +  A++ I+ + VE    +WGALLGAC  H + NLA VA
Sbjct: 462 LVEPKTEHYACMVDLLGRAGLVNDAMDLIQKMPVEADAIIWGALLGACRTHMNMNLAEVA 521

Query: 604 SEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHV 663
           ++KL +L+P+N G ++LLSNIY+++  +   A +R+ ++ +K++K+PGC+ IEV    H+
Sbjct: 522 AKKLLQLEPKNAGPYILLSNIYASKGRWGDVAELRRNMRVKKVSKSPGCSWIEVEKRVHM 581

Query: 664 FTSG-DQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAI 722
           FT G    HP+ ++I  MLEKL+G +REAG+  ++   LHDV+EEEK   +  HSE+LA+
Sbjct: 582 FTGGVSTKHPELSSIMKMLEKLDGMLREAGYYPDSSFVLHDVDEEEKVRSLGHHSERLAV 641

Query: 723 AFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGD 782
           AFGL+    G  IR++KNLRVC DCH+A K I+K+TGR I++RDANRFHHFK G CSC D
Sbjct: 642 AFGLLKVPEGMPIRVMKNLRVCGDCHSAIKLIAKITGREIILRDANRFHHFKDGFCSCRD 701

Query: 783 YW 784
           YW
Sbjct: 702 YW 703



 Score =  129 bits (323), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 114/461 (24%), Positives = 201/461 (43%), Gaps = 43/461 (9%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEM-PKSSICFYTHLRKN----TALTPDNFTYSFV 114
           AR LF  +P+ +   +N +I G+  N M  ++   F T   +N    TA+         V
Sbjct: 66  ARYLFDKMPERNTVSWNGLISGYVKNRMVSEARKAFDTMPERNVVSWTAMVRGYVQEGLV 125

Query: 115 LSAASACCDRS----------IGVLLHGHAIVSGYG-------SDLFVGAALVDLYFKFS 157
             A +                +G L+    I    G        D+     ++  Y +  
Sbjct: 126 SEAETLFWQMPEKNVVSWTVMLGGLIQVRRIDEARGLFDIMPVKDVVARTNMISGYCQEG 185

Query: 158 WVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMV-RNGGTWLDSTSVAAV 216
            +  AR++FD+MP ++ + W +MISG ++N     +  +F  M  +N  +W         
Sbjct: 186 RLAEARELFDEMPRRNVISWTTMISGYVQNGQVDVARKLFEVMPEKNEVSWTAMLMGYTQ 245

Query: 217 LPAVAEVQELRLGMEIQ----CLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIV 272
              + E  EL   M ++    C  + LGF  +              GEV +A  +F  I 
Sbjct: 246 GGRIEEASELFDAMPVKAVVACNAMILGFGQN--------------GEVAKARQVFDQIR 291

Query: 273 RPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNC 332
             D  + +AMI  Y   G    +L LF  +     + N  +++ ++ V      L     
Sbjct: 292 EKDDGTWSAMIKVYERKGFEVEALNLFALMQREGVQSNFPSLISVLSVCASLASLDHGRQ 351

Query: 333 IHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGL 392
           +H+  +KS   S+  V + L T+Y +  ++  AR++FD  S K +  WN++I GY Q+GL
Sbjct: 352 VHAELVKSQFDSDVFVASVLITMYVKCGDLVKARQIFDRFSPKDIVMWNSIITGYAQHGL 411

Query: 393 TEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNF-ESNIYVST 451
            EEA+ +F EM +S +A + VT   +LSAC+  G +  G  + E +KS+   E       
Sbjct: 412 VEEALQVFHEMCSSGMATDGVTFVGVLSACSYTGKVKEGLEIFESMKSKYLVEPKTEHYA 471

Query: 452 ALIDMYAKCGNIVEARELFDLMSHKSE-VTWNTMISGYGLH 491
            ++D+  + G + +A +L   M  +++ + W  ++     H
Sbjct: 472 CMVDLLGRAGLVNDAMDLIQKMPVEADAIIWGALLGACRTH 512



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 92/339 (27%), Positives = 156/339 (46%), Gaps = 61/339 (17%)

Query: 252 VSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNS 311
           ++ Y++ G++E A  +F ++    ++S N+M++GY  N +   +  LF ++    ER N+
Sbjct: 23  IARYARIGQIESARRVFDEMPDKGIVSWNSMVAGYFQNNRPREARYLFDKM---PER-NT 78

Query: 312 STIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDE 371
            +  GLI                     SG V N  V                ARK FD 
Sbjct: 79  VSWNGLI---------------------SGYVKNRMV--------------SEARKAFDT 103

Query: 372 SSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLG 431
             E+++ SW AM+ GY Q GL  EA +LF +M       N V+ + +L    Q+  I   
Sbjct: 104 MPERNVVSWTAMVRGYVQEGLVSEAETLFWQMPEK----NVVSWTVMLGGLIQVRRIDEA 159

Query: 432 KWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLH 491
           + + +++  +    ++   T +I  Y + G + EARELFD M  ++ ++W TMISGY  +
Sbjct: 160 RGLFDIMPVK----DVVARTNMISGYCQEGRLAEARELFDEMPRRNVISWTTMISGYVQN 215

Query: 492 GHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEH 551
           G    A +LF  M       + V++ ++L   +  G + E  E+F +M       P+   
Sbjct: 216 GQVDVARKLFEVMPEK----NEVSWTAMLMGYTQGGRIEEASELFDAM-------PVKAV 264

Query: 552 YACMVDIL--GRAGQLEKALEFIKGLAVEPGPAVWGALL 588
            AC   IL  G+ G++ KA +    +  E     W A++
Sbjct: 265 VACNAMILGFGQNGEVAKARQVFDQIR-EKDDGTWSAMI 302


>gi|449440989|ref|XP_004138266.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
 gi|449524140|ref|XP_004169081.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 695

 Score =  490 bits (1262), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 249/626 (39%), Positives = 374/626 (59%), Gaps = 1/626 (0%)

Query: 159 VKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLP 218
           +  A  +F+ + + ++  +N MI GL       +++ +F  M        D  + ++VL 
Sbjct: 71  IDYALSIFNHIDKPESSAYNVMIRGLAFKRSPDNALLLFKKM-HEKSVQHDKFTFSSVLK 129

Query: 219 AVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLIS 278
           A + ++ LR G ++  L LK GF  + +V   L+  Y+ CG++  A  +F  +    +++
Sbjct: 130 ACSRMKALREGEQVHALILKSGFKSNEFVENTLIQMYANCGQIGVARHVFDGMPERSIVA 189

Query: 279 CNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCL 338
            N+M+SGYT NG  +  ++LFR++L      +  T++ ++       +L +   I  + +
Sbjct: 190 WNSMLSGYTKNGLWDEVVKLFRKILELRIEFDDVTMISVLMACGRLANLEIGELIGEYIV 249

Query: 339 KSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAIS 398
             G+  N+++ T+L  +Y++  +++ ARKLFDE  ++ + +W+AMI+GY Q    +EA++
Sbjct: 250 SKGLRRNNTLTTSLIDMYAKCGQVDTARKLFDEMDKRDVVAWSAMISGYAQADRCKEALN 309

Query: 399 LFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYA 458
           LF EMQ   V PN VT+ S+L +CA LGA   GKWVH  +K +  +  + + T LID YA
Sbjct: 310 LFHEMQKGNVYPNEVTMVSVLYSCAMLGAYETGKWVHFYIKKKKMKLTVTLGTQLIDFYA 369

Query: 459 KCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLS 518
           KCG I  + E+F  MS K+  TW  +I G   +G G  AL+ FS ML + ++P+ VTF+ 
Sbjct: 370 KCGYIDRSVEVFKEMSFKNVFTWTALIQGLANNGEGKMALEFFSSMLENDVKPNDVTFIG 429

Query: 519 VLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVE 578
           VL ACSHA LV +G  +F SM  D   +P  EHY CMVDILGRAG LE+A +FI  +   
Sbjct: 430 VLSACSHACLVDQGRHLFNSMRRDFDIEPRIEHYGCMVDILGRAGFLEEAYQFIDNMPFP 489

Query: 579 PGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVR 638
           P   VW  LL +C  HK+  +A  + E +  L+P + G ++LLSN Y+       A  VR
Sbjct: 490 PNAVVWRTLLASCRAHKNIEMAEKSLEHITRLEPAHSGDYILLSNTYALVGRVEDAIRVR 549

Query: 639 QVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETV 698
            ++K++++ K PGC+LIE+ G  H F S D  H  S  I+  L+K+  +++  G+   T 
Sbjct: 550 SLIKEKEIKKIPGCSLIELDGVVHEFFSEDGEHKHSKEIHDALDKMMKQIKRLGYVPNTD 609

Query: 699 TALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVT 758
            A  + EEE KE  +  HSEKLAIA+GLI T P T IRI KNLR+C DCH ATKFIS+V 
Sbjct: 610 DARLEAEEESKETSVSHHSEKLAIAYGLIRTSPRTTIRISKNLRMCRDCHNATKFISQVF 669

Query: 759 GRVIVVRDANRFHHFKGGVCSCGDYW 784
            R+I+VRD NRFHHFK G+CSC DYW
Sbjct: 670 ERMIIVRDRNRFHHFKDGLCSCNDYW 695



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 131/483 (27%), Positives = 232/483 (48%), Gaps = 10/483 (2%)

Query: 15  LLKGAKTQSQLTQTHAQII-IHGFQNDLSTVTKL---AHRLSDFKATCYARALFFSIPKP 70
           +L+  KT   L Q HA ++      + + T   L   A  L D     YA ++F  I KP
Sbjct: 27  ILQQCKTPKDLQQVHAHLLKTRRLLDPIITEAVLESAALLLPD--TIDYALSIFNHIDKP 84

Query: 71  DLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLL 130
           +   +NV+IRG +    P +++  +  + + + +  D FT+S VL A S       G  +
Sbjct: 85  ESSAYNVMIRGLAFKRSPDNALLLFKKMHEKS-VQHDKFTFSSVLKACSRMKALREGEQV 143

Query: 131 HGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCF 190
           H   + SG+ S+ FV   L+ +Y     +  AR VFD MPE+  V WNSM+SG  KN  +
Sbjct: 144 HALILKSGFKSNEFVENTLIQMYANCGQIGVARHVFDGMPERSIVAWNSMLSGYTKNGLW 203

Query: 191 QDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTG 250
            + + +F  ++       D  ++ +VL A   +  L +G  I    +  G   +  + T 
Sbjct: 204 DEVVKLFRKIL-ELRIEFDDVTMISVLMACGRLANLEIGELIGEYIVSKGLRRNNTLTTS 262

Query: 251 LVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVN 310
           L+  Y+KCG+V+ A  LF ++ + D+++ +AMISGY    + + +L LF ++       N
Sbjct: 263 LIDMYAKCGQVDTARKLFDEMDKRDVVAWSAMISGYAQADRCKEALNLFHEMQKGNVYPN 322

Query: 311 SSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFD 370
             T+V ++      G       +H +  K  +    ++ T L   Y++   ++ + ++F 
Sbjct: 323 EVTMVSVLYSCAMLGAYETGKWVHFYIKKKKMKLTVTLGTQLIDFYAKCGYIDRSVEVFK 382

Query: 371 ESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISL 430
           E S K++ +W A+I G   NG  + A+  F  M  + V PN VT   +LSAC+    +  
Sbjct: 383 EMSFKNVFTWTALIQGLANNGEGKMALEFFSSMLENDVKPNDVTFIGVLSACSHACLVDQ 442

Query: 431 GKWV-HELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSH-KSEVTWNTMISGY 488
           G+ + + + +  + E  I     ++D+  + G + EA +  D M    + V W T+++  
Sbjct: 443 GRHLFNSMRRDFDIEPRIEHYGCMVDILGRAGFLEEAYQFIDNMPFPPNAVVWRTLLASC 502

Query: 489 GLH 491
             H
Sbjct: 503 RAH 505



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 70/231 (30%), Positives = 117/231 (50%), Gaps = 2/231 (0%)

Query: 360 NEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSIL 419
           + ++ A  +F+   +   +++N MI G       + A+ LF++M    V  +  T SS+L
Sbjct: 69  DTIDYALSIFNHIDKPESSAYNVMIRGLAFKRSPDNALLLFKKMHEKSVQHDKFTFSSVL 128

Query: 420 SACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEV 479
            AC+++ A+  G+ VH L+    F+SN +V   LI MYA CG I  AR +FD M  +S V
Sbjct: 129 KACSRMKALREGEQVHALILKSGFKSNEFVENTLIQMYANCGQIGVARHVFDGMPERSIV 188

Query: 480 TWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSM 539
            WN+M+SGY  +G   E ++LF ++L   I    VT +SVL AC     +  G E+    
Sbjct: 189 AWNSMLSGYTKNGLWDEVVKLFRKILELRIEFDDVTMISVLMACGRLANLEIG-ELIGEY 247

Query: 540 IHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGA 590
           I   G +        ++D+  + GQ++ A +    +  +     W A++  
Sbjct: 248 IVSKGLRRNNTLTTSLIDMYAKCGQVDTARKLFDEMD-KRDVVAWSAMISG 297


>gi|356502293|ref|XP_003519954.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
            [Glycine max]
          Length = 1047

 Score =  490 bits (1261), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 280/760 (36%), Positives = 421/760 (55%), Gaps = 6/760 (0%)

Query: 27   QTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNE 86
            Q H  ++  GF  +      L    S       A  +F ++ + D   +N +I G S   
Sbjct: 292  QLHGLVLKQGFSLETYVCNALVTLYSRLGNFIPAEQVFNAMLQRDEVSYNSLISGLSQQG 351

Query: 87   MPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVG 146
                ++  +  +  +  L PD  T + +LSA S+     +G   H +AI +G  SD+ + 
Sbjct: 352  YSDKALELFKKMCLD-CLKPDCVTVASLLSACSSVGALLVGKQFHSYAIKAGMSSDIILE 410

Query: 147  AALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMI--SGLMKNCCFQDSIWVFGDMVRNG 204
             AL+DLY K S +K+A + F     ++ VLWN M+   GL+ N    +S  +F  M +  
Sbjct: 411  GALLDLYVKCSDIKTAHEFFLSTETENVVLWNVMLVAYGLLDN--LNESFKIFTQM-QME 467

Query: 205  GTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERA 264
            G   +  +  ++L   + ++ + LG +I    LK GF  +VYV + L+  Y+K G+++ A
Sbjct: 468  GIEPNQFTYPSILRTCSSLRAVDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKLGKLDHA 527

Query: 265  ELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPF 324
              +FR +   D++S  AMI+GY  + K   +L LF+++       ++      I      
Sbjct: 528  LKIFRRLKEKDVVSWTAMIAGYAQHEKFAEALNLFKEMQDQGIHSDNIGFASAISACAGI 587

Query: 325  GHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMI 384
              L+    IH+    SG   + SV  AL ++Y+R  ++  A   FD+   K   SWN++I
Sbjct: 588  QALNQGQQIHAQACVSGYSDDLSVGNALVSLYARCGKVRDAYFAFDKIFSKDNISWNSLI 647

Query: 385  AGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFE 444
            +G+ Q+G  EEA+SLF +M  +    N  T    +SA A +  + LGK +H ++     +
Sbjct: 648  SGFAQSGHCEEALSLFSQMSKAGQEINSFTFGPAVSAAANVANVKLGKQIHAMIIKTGHD 707

Query: 445  SNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEM 504
            S   VS  LI +YAKCGNI +A   F  M  K+E++WN M++GY  HGHG +AL LF +M
Sbjct: 708  SETEVSNVLITLYAKCGNIDDAERQFFEMPEKNEISWNAMLTGYSQHGHGFKALSLFEDM 767

Query: 505  LHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQ 564
               G+ P+ VTF+ VL ACSH GLV EG + FQSM   HG  P  EHYAC+VD+LGR+G 
Sbjct: 768  KQLGVLPNHVTFVGVLSACSHVGLVDEGIKYFQSMREVHGLVPKPEHYACVVDLLGRSGL 827

Query: 565  LEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNI 624
            L +A  F++ + ++P   V   LL AC++HK+ ++   A+  L EL+P++   +VLLSN+
Sbjct: 828  LSRARRFVEEMPIQPDAMVCRTLLSACIVHKNIDIGEFAASHLLELEPKDSATYVLLSNM 887

Query: 625  YSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKL 684
            Y+    +      RQ++K R + K PG + IEV  + H F +GDQ HP    IY  L  L
Sbjct: 888  YAVTGKWGCRDRTRQMMKDRGVKKEPGRSWIEVNNSVHAFFAGDQKHPNVDKIYEYLRDL 947

Query: 685  NGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVC 744
            N    E G+  +T + L+D E  +K     +HSEKLAIAFGL++    T I + KNLRVC
Sbjct: 948  NELAAENGYIPQTNSLLNDAERRQKGPTQIIHSEKLAIAFGLLSLSSSTPIHVFKNLRVC 1007

Query: 745  LDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
             DCH   K++SK++ RVIVVRD+ RFHHFKGG+CSC DYW
Sbjct: 1008 GDCHNWIKYVSKISDRVIVVRDSYRFHHFKGGICSCKDYW 1047



 Score =  255 bits (651), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 157/533 (29%), Positives = 270/533 (50%), Gaps = 16/533 (3%)

Query: 12  FLSLLKGAKTQSQLT---QTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIP 68
           +L LL G  +    +   + H +I+  GF  ++    +L      F     A  +F  +P
Sbjct: 71  YLWLLDGCLSSGWFSDGWKLHGKILKMGFCAEVVLCERLMDLYIAFGDLDGAVTVFDEMP 130

Query: 69  KPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASA------CC 122
              L  +N ++  F   +M    +  +  + +   + PD  TY+ VL           C 
Sbjct: 131 VRPLSCWNKVLHRFVAGKMAGRVLGLFRRMLQEK-VKPDERTYAGVLRGCGGGDVPFHCV 189

Query: 123 DRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMIS 182
           ++     +H   I  GY + LFV   L+DLYFK  ++ SA+KVFD + ++D+V W +M+S
Sbjct: 190 EK-----IHARTITHGYENSLFVCNPLIDLYFKNGFLNSAKKVFDGLQKRDSVSWVAMLS 244

Query: 183 GLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFH 242
           GL ++ C ++++ +F  M    G +      ++VL A  +V+  ++G ++  L LK GF 
Sbjct: 245 GLSQSGCEEEAVLLFCQM-HTSGVYPTPYIFSSVLSACTKVEFYKVGEQLHGLVLKQGFS 303

Query: 243 DHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQL 302
              YV   LV+ YS+ G    AE +F  +++ D +S N++ISG +  G ++ +L LF+++
Sbjct: 304 LETYVCNALVTLYSRLGNFIPAEQVFNAMLQRDEVSYNSLISGLSQQGYSDKALELFKKM 363

Query: 303 LASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEM 362
                + +  T+  L+      G L +    HS+ +K+G+ S+  +  AL  +Y + +++
Sbjct: 364 CLDCLKPDCVTVASLLSACSSVGALLVGKQFHSYAIKAGMSSDIILEGALLDLYVKCSDI 423

Query: 363 EAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSAC 422
           + A + F  +  +++  WN M+  Y       E+  +F +MQ   + PN  T  SIL  C
Sbjct: 424 KTAHEFFLSTETENVVLWNVMLVAYGLLDNLNESFKIFTQMQMEGIEPNQFTYPSILRTC 483

Query: 423 AQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWN 482
           + L A+ LG+ +H  V    F+ N+YVS+ LIDMYAK G +  A ++F  +  K  V+W 
Sbjct: 484 SSLRAVDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKLGKLDHALKIFRRLKEKDVVSWT 543

Query: 483 TMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEI 535
            MI+GY  H    EAL LF EM   GI    + F S + AC+    + +G +I
Sbjct: 544 AMIAGYAQHEKFAEALNLFKEMQDQGIHSDNIGFASAISACAGIQALNQGQQI 596



 Score =  199 bits (505), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 145/521 (27%), Positives = 255/521 (48%), Gaps = 15/521 (2%)

Query: 81  GFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYG 140
            +SN+E   + I F  HL +   +  ++ TY ++L    +    S G  LHG  +  G+ 
Sbjct: 42  AYSNDEGEANGINF-LHLMEERGVRANSQTYLWLLDGCLSSGWFSDGWKLHGKILKMGFC 100

Query: 141 SDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDM 200
           +++ +   L+DLY  F  +  A  VFD+MP +    WN ++   +        + +F  M
Sbjct: 101 AEVVLCERLMDLYIAFGDLDGAVTVFDEMPVRPLSCWNKVLHRFVAGKMAGRVLGLFRRM 160

Query: 201 VRNGGTWLDSTSVAAVLPAVAEVQ-ELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCG 259
           ++      D  + A VL              +I    +  G+ + ++V   L+  Y K G
Sbjct: 161 LQE-KVKPDERTYAGVLRGCGGGDVPFHCVEKIHARTITHGYENSLFVCNPLIDLYFKNG 219

Query: 260 EVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASA----ERVNSSTIV 315
            +  A+ +F  + + D +S  AM+SG + +G  E ++ LF Q+  S       + SS + 
Sbjct: 220 FLNSAKKVFDGLQKRDSVSWVAMLSGLSQSGCEEEAVLLFCQMHTSGVYPTPYIFSSVLS 279

Query: 316 GLIPV-FYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSE 374
               V FY  G       +H   LK G    + V  AL T+YSRL     A ++F+   +
Sbjct: 280 ACTKVEFYKVGEQ-----LHGLVLKQGFSLETYVCNALVTLYSRLGNFIPAEQVFNAMLQ 334

Query: 375 KSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWV 434
           +   S+N++I+G +Q G +++A+ LF++M    + P+ VTV+S+LSAC+ +GA+ +GK  
Sbjct: 335 RDEVSYNSLISGLSQQGYSDKALELFKKMCLDCLKPDCVTVASLLSACSSVGALLVGKQF 394

Query: 435 HELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHG 494
           H         S+I +  AL+D+Y KC +I  A E F     ++ V WN M+  YGL  + 
Sbjct: 395 HSYAIKAGMSSDIILEGALLDLYVKCSDIKTAHEFFLSTETENVVLWNVMLVAYGLLDNL 454

Query: 495 LEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYAC 554
            E+ ++F++M   GI P+  T+ S+L  CS    V  G++I  + +   GF+      + 
Sbjct: 455 NESFKIFTQMQMEGIEPNQFTYPSILRTCSSLRAVDLGEQI-HTQVLKTGFQFNVYVSSV 513

Query: 555 MVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHK 595
           ++D+  + G+L+ AL+  + L  E     W A++     H+
Sbjct: 514 LIDMYAKLGKLDHALKIFRRLK-EKDVVSWTAMIAGYAQHE 553



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 67/279 (24%), Positives = 130/279 (46%), Gaps = 12/279 (4%)

Query: 13  LSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATC-YARALFFSIPK-- 69
           +S   G +  +Q  Q HAQ  + G+ +DLS    + + L    A C   R  +F+  K  
Sbjct: 581 ISACAGIQALNQGQQIHAQACVSGYSDDLS----VGNALVSLYARCGKVRDAYFAFDKIF 636

Query: 70  -PDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGV 128
             D   +N +I GF+ +   + ++  ++ + K      ++FT+   +SAA+   +  +G 
Sbjct: 637 SKDNISWNSLISGFAQSGHCEEALSLFSQMSK-AGQEINSFTFGPAVSAAANVANVKLGK 695

Query: 129 LLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNC 188
            +H   I +G+ S+  V   L+ LY K   +  A + F +MPEK+ + WN+M++G  ++ 
Sbjct: 696 QIHAMIIKTGHDSETEVSNVLITLYAKCGNIDDAERQFFEMPEKNEISWNAMLTGYSQHG 755

Query: 189 CFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGME-IQCLGLKLGFHDHVYV 247
               ++ +F DM +  G   +  +   VL A + V  +  G++  Q +    G       
Sbjct: 756 HGFKALSLFEDM-KQLGVLPNHVTFVGVLSACSHVGLVDEGIKYFQSMREVHGLVPKPEH 814

Query: 248 LTGLVSFYSKCGEVERAELLFRDI-VRPDLISCNAMISG 285
              +V    + G + RA     ++ ++PD + C  ++S 
Sbjct: 815 YACVVDLLGRSGLLSRARRFVEEMPIQPDAMVCRTLLSA 853



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 49/217 (22%), Positives = 85/217 (39%), Gaps = 5/217 (2%)

Query: 374 EKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKW 433
           +K L    A+   Y+ +      I+    M+   V  N  T   +L  C   G  S G  
Sbjct: 30  QKFLEHNTALSYAYSNDEGEANGINFLHLMEERGVRANSQTYLWLLDGCLSSGWFSDGWK 89

Query: 434 VHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGH 493
           +H  +    F + + +   L+D+Y   G++  A  +FD M  +    WN ++  +     
Sbjct: 90  LHGKILKMGFCAEVVLCERLMDLYIAFGDLDGAVTVFDEMPVRPLSCWNKVLHRFVAGKM 149

Query: 494 GLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYA 553
               L LF  ML   ++P   T+  VL  C    +     E   +    HG++     + 
Sbjct: 150 AGRVLGLFRRMLQEKVKPDERTYAGVLRGCGGGDVPFHCVEKIHARTITHGYE--NSLFV 207

Query: 554 C--MVDILGRAGQLEKALEFIKGLAVEPGPAVWGALL 588
           C  ++D+  + G L  A +   GL  +     W A+L
Sbjct: 208 CNPLIDLYFKNGFLNSAKKVFDGLQ-KRDSVSWVAML 243


>gi|359483532|ref|XP_002265722.2| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Vitis vinifera]
          Length = 824

 Score =  490 bits (1261), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 253/657 (38%), Positives = 393/657 (59%), Gaps = 4/657 (0%)

Query: 128 VLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKN 187
           +L++G+A +  +   L +   + +L  +   V+SARK+FD++ ++D + WNSMISG + N
Sbjct: 172 LLMNGYAKIGNFRESLSLFKRMRELGIRR--VESARKLFDELGDRDVISWNSMISGYVSN 229

Query: 188 CCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYV 247
              +  + +F  M+  G    D  ++ +V+   +    L LG  +    +K  F   + +
Sbjct: 230 GLSEKGLDLFEQMLLLGIN-TDLATMVSVVAGCSNTGMLLLGRALHGYAIKASFGKELTL 288

Query: 248 LTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAE 307
              L+  YSK G +  A  +F  +    ++S  +MI+GY   G ++ S+RLF ++     
Sbjct: 289 NNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSVRLFHEMEKEGI 348

Query: 308 RVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARK 367
             +  TI  ++      G L     +H++  ++ + S+  V  AL  +Y++   M  A  
Sbjct: 349 SPDIFTITTILHACACTGLLENGKDVHNYIKENKMQSDLFVSNALMDMYAKCGSMGDAHS 408

Query: 368 LFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGA 427
           +F E   K + SWN MI GY++N L  EA++LF EMQ +   PN +T++ IL ACA L A
Sbjct: 409 VFSEMQVKDIVSWNTMIGGYSKNSLPNEALNLFVEMQYNS-KPNSITMACILPACASLAA 467

Query: 428 ISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISG 487
           +  G+ +H  +    F  + +V+ AL+DMY KCG +  AR LFD++  K  V+W  MI+G
Sbjct: 468 LERGQEIHGHILRNGFSLDRHVANALVDMYLKCGALGLARLLFDMIPEKDLVSWTVMIAG 527

Query: 488 YGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKP 547
           YG+HG+G EA+  F+EM +SGI P  V+F+S+LYACSH+GL+ EG   F  M ++   +P
Sbjct: 528 YGMHGYGSEAIAAFNEMRNSGIEPDEVSFISILYACSHSGLLDEGWGFFNMMRNNCCIEP 587

Query: 548 LAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKL 607
            +EHYAC+VD+L RAG L KA +FIK + +EP   +WGALL  C I+ D  LA   +E +
Sbjct: 588 KSEHYACIVDLLARAGNLSKAYKFIKMMPIEPDATIWGALLCGCRIYHDVKLAEKVAEHV 647

Query: 608 FELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSG 667
           FEL+PEN GY+VLL+NIY+    + +   +R+ + +R L K PGC+ IE+ G  H+F +G
Sbjct: 648 FELEPENTGYYVLLANIYAEAEKWEEVKKLRERIGRRGLRKNPGCSWIEIKGKVHIFVTG 707

Query: 668 DQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLI 727
           D  HP +  I  +L+K   +M+E G   +   AL   ++ EKE+ +  HSEK+A+AFG++
Sbjct: 708 DSSHPLANKIELLLKKTRTRMKEEGHFPKMRYALIKADDTEKEMALCGHSEKIAMAFGIL 767

Query: 728 ATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           +  PG  +R+ KNLRVC DCH   KF+SK+  R I++RD+NRFHHFK G CSC  +W
Sbjct: 768 SLPPGKTVRVTKNLRVCGDCHEMAKFMSKMVKRDIILRDSNRFHHFKDGSCSCRGHW 824



 Score =  176 bits (445), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 126/459 (27%), Positives = 221/459 (48%), Gaps = 13/459 (2%)

Query: 34  IHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSIC 93
           I  F+  LS   ++  R    +    AR LF  +   D+  +N +I G+ +N + +  + 
Sbjct: 180 IGNFRESLSLFKRM--RELGIRRVESARKLFDELGDRDVISWNSMISGYVSNGLSEKGLD 237

Query: 94  FYTHLRKNTALTPDNFTYSFVLSAASACCDRS---IGVLLHGHAIVSGYGSDLFVGAALV 150
            +  +     L   N   + ++S  + C +     +G  LHG+AI + +G +L +   L+
Sbjct: 238 LFEQM----LLLGINTDLATMVSVVAGCSNTGMLLLGRALHGYAIKASFGKELTLNNCLL 293

Query: 151 DLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDS 210
           D+Y K   + SA +VF+ M E+  V W SMI+G  +      S+ +F +M + G +  D 
Sbjct: 294 DMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSVRLFHEMEKEGIS-PDI 352

Query: 211 TSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRD 270
            ++  +L A A    L  G ++     +      ++V   L+  Y+KCG +  A  +F +
Sbjct: 353 FTITTILHACACTGLLENGKDVHNYIKENKMQSDLFVSNALMDMYAKCGSMGDAHSVFSE 412

Query: 271 IVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLT 330
           +   D++S N MI GY+ N     +L LF ++  ++ + NS T+  ++P       L   
Sbjct: 413 MQVKDIVSWNTMIGGYSKNSLPNEALNLFVEMQYNS-KPNSITMACILPACASLAALERG 471

Query: 331 NCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQN 390
             IH   L++G   +  V  AL  +Y +   +  AR LFD   EK L SW  MIAGY  +
Sbjct: 472 QEIHGHILRNGFSLDRHVANALVDMYLKCGALGLARLLFDMIPEKDLVSWTVMIAGYGMH 531

Query: 391 GLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSR-NFESNIYV 449
           G   EAI+ F EM+ S + P+ V+  SIL AC+  G +  G     ++++    E     
Sbjct: 532 GYGSEAIAAFNEMRNSGIEPDEVSFISILYACSHSGLLDEGWGFFNMMRNNCCIEPKSEH 591

Query: 450 STALIDMYAKCGNIVEARELFDLMSHKSEVT-WNTMISG 487
              ++D+ A+ GN+ +A +   +M  + + T W  ++ G
Sbjct: 592 YACIVDLLARAGNLSKAYKFIKMMPIEPDATIWGALLCG 630



 Score =  102 bits (254), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 68/307 (22%), Positives = 133/307 (43%), Gaps = 51/307 (16%)

Query: 333 IHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMI-------- 384
           IHS    + +  +  + + L  +Y    ++   R++FD+ + + +  WN ++        
Sbjct: 123 IHSIIQSNDVEVDGVLGSKLVFMYVTCGDLREGRRIFDKVANEKVFLWNLLMNGYAKIGN 182

Query: 385 -----------------------------------------AGYTQNGLTEEAISLFQEM 403
                                                    +GY  NGL+E+ + LF++M
Sbjct: 183 FRESLSLFKRMRELGIRRVESARKLFDELGDRDVISWNSMISGYVSNGLSEKGLDLFEQM 242

Query: 404 QASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNI 463
               +  +  T+ S+++ C+  G + LG+ +H      +F   + ++  L+DMY+K GN+
Sbjct: 243 LLLGINTDLATMVSVVAGCSNTGMLLLGRALHGYAIKASFGKELTLNNCLLDMYSKSGNL 302

Query: 464 VEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYAC 523
             A ++F+ M  +S V+W +MI+GY   G    +++LF EM   GI P   T  ++L+AC
Sbjct: 303 NSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSVRLFHEMEKEGISPDIFTITTILHAC 362

Query: 524 SHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAV 583
           +  GL+  G ++   +  +     L    A M D+  + G +  A      + V+     
Sbjct: 363 ACTGLLENGKDVHNYIKENKMQSDLFVSNALM-DMYAKCGSMGDAHSVFSEMQVKD-IVS 420

Query: 584 WGALLGA 590
           W  ++G 
Sbjct: 421 WNTMIGG 427



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 63/272 (23%), Positives = 113/272 (41%), Gaps = 53/272 (19%)

Query: 368 LFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGA 427
           L  E+ +  +  +N  I  + + G    A+ L    Q+ K      T  S+L  CA L +
Sbjct: 59  LPSETIDCKITDYNIEICRFCELGNLRRAMELIN--QSPKPDLELRTYCSVLQLCADLKS 116

Query: 428 ISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVE---------------------- 465
           I  G+ +H +++S + E +  + + L+ MY  CG++ E                      
Sbjct: 117 IQDGRRIHSIIQSNDVEVDGVLGSKLVFMYVTCGDLREGRRIFDKVANEKVFLWNLLMNG 176

Query: 466 ---------------------------ARELFDLMSHKSEVTWNTMISGYGLHGHGLEAL 498
                                      AR+LFD +  +  ++WN+MISGY  +G   + L
Sbjct: 177 YAKIGNFRESLSLFKRMRELGIRRVESARKLFDELGDRDVISWNSMISGYVSNGLSEKGL 236

Query: 499 QLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDI 558
            LF +ML  GI     T +SV+  CS+ G++  G  +    I     K L  +  C++D+
Sbjct: 237 DLFEQMLLLGINTDLATMVSVVAGCSNTGMLLLGRALHGYAIKASFGKELTLN-NCLLDM 295

Query: 559 LGRAGQLEKALEFIKGLAVEPGPAVWGALLGA 590
             ++G L  A++  + +  E     W +++  
Sbjct: 296 YSKSGNLNSAIQVFETMG-ERSVVSWTSMIAG 326



 Score = 49.7 bits (117), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 42/164 (25%), Positives = 70/164 (42%), Gaps = 13/164 (7%)

Query: 27  QTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNE 86
           + H  I+ +GF  D      L        A   AR LF  IP+ DL  + V+I G+  + 
Sbjct: 473 EIHGHILRNGFSLDRHVANALVDMYLKCGALGLARLLFDMIPEKDLVSWTVMIAGYGMHG 532

Query: 87  MPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVG 146
               +I  +  +R N+ + PD  ++  +L A    C  S G+L  G    +   ++  + 
Sbjct: 533 YGSEAIAAFNEMR-NSGIEPDEVSFISILYA----CSHS-GLLDEGWGFFNMMRNNCCIE 586

Query: 147 ------AALVDLYFKFSWVKSARKVFDKMP-EKDTVLWNSMISG 183
                 A +VDL  +   +  A K    MP E D  +W +++ G
Sbjct: 587 PKSEHYACIVDLLARAGNLSKAYKFIKMMPIEPDATIWGALLCG 630


>gi|125552577|gb|EAY98286.1| hypothetical protein OsI_20194 [Oryza sativa Indica Group]
          Length = 874

 Score =  490 bits (1261), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 264/749 (35%), Positives = 422/749 (56%), Gaps = 8/749 (1%)

Query: 38  QNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTH 97
           + ++S  T L        + C    +F  +PK ++  +  ++ G ++ +M    +  +  
Sbjct: 132 RGEVSAGTSLVDMYMKCGSVCEGIEVFEGMPKKNVVTWTSLLTGCAHAQMHSEVMALFFR 191

Query: 98  LRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFS 157
           +R    + P+ FT++ VLSA ++     +G  +H  ++  G  S +FV  +L+++Y K  
Sbjct: 192 MRAE-GIWPNPFTFASVLSAVASQGALDLGQRVHAQSVKFGCRSSVFVCNSLMNMYAKCG 250

Query: 158 WVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVL 217
            V+ A+ VF+ M  +D V WN++++GL  N C  +++ +F +     G    ST  A V+
Sbjct: 251 LVEDAKSVFNWMETRDMVSWNTLMAGLQLNECELEALQLFHESRATMGKMTQST-YATVI 309

Query: 218 PAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIV-RPDL 276
              A +++L L  ++    LK GFH    V+T L   YSKCGE+  A  +F       ++
Sbjct: 310 KLCANLKQLALARQLHSCVLKHGFHLTGNVMTALADAYSKCGELADALNIFSMTTGSRNV 369

Query: 277 ISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSF 336
           +S  A+ISG   NG    ++ LF ++       N  T   ++          L   IH+ 
Sbjct: 370 VSWTAIISGCIQNGDIPLAVVLFSRMREDRVMPNEFTYSAMLKASLSI----LPPQIHAQ 425

Query: 337 CLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEA 396
            +K+      SV TAL   YS+    E A  +F    +K + +W+AM++ + Q G  E A
Sbjct: 426 VIKTNYQHIPSVGTALLASYSKFGSTEDALSIFKMIEQKDVVAWSAMLSCHAQAGDCEGA 485

Query: 397 ISLFQEMQASKVAPNPVTVSSILSACAQLGA-ISLGKWVHELVKSRNFESNIYVSTALID 455
             LF +M    + PN  T+SS++ ACA   A +  G+  H +     +   I VS+AL+ 
Sbjct: 486 TYLFNKMAIQGIKPNEFTISSVIDACACPSAGVDQGRQFHAISIKYRYHDAICVSSALVS 545

Query: 456 MYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVT 515
           MY++ GNI  A+ +F+  + +  V+WN+MISGY  HG+ ++A++ F +M  SGI+  GVT
Sbjct: 546 MYSRKGNIDSAQIVFERQTDRDLVSWNSMISGYAQHGYSMKAIETFRQMEASGIQMDGVT 605

Query: 516 FLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGL 575
           FL+V+  C+H GLV EG + F SM+ DH   P  EHYACMVD+  RAG+L++ +  I+ +
Sbjct: 606 FLAVIMGCTHNGLVVEGQQYFDSMVRDHKINPTMEHYACMVDLYSRAGKLDETMSLIRDM 665

Query: 576 AVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAA 635
               G  VW  LLGAC +HK+  L + +++KL  L+P +   +VLLSNIY+A   + +  
Sbjct: 666 PFPAGAMVWRTLLGACRVHKNVELGKFSADKLLSLEPHDSSTYVLLSNIYAAAGKWKERD 725

Query: 636 TVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQT 695
            VR+++  RK+ K  GC+ I++    H F + D+ HP S  IY  L+ +  ++++ G+  
Sbjct: 726 EVRKLMDYRKVKKEAGCSWIQIKNKVHSFIAFDKSHPMSDQIYKKLKVIITRLKQDGYSP 785

Query: 696 ETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFIS 755
            T   LHD+ E++KE M+  HSE+LA+AFGLIAT PGT ++I+KNLRVC DCH   K +S
Sbjct: 786 NTSFVLHDIAEDQKEAMLVAHSERLALAFGLIATPPGTPLQIVKNLRVCGDCHMVMKMVS 845

Query: 756 KVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
            +  R I++RD +RFHHF GG CSCGD+W
Sbjct: 846 MIEDREIIMRDCSRFHHFNGGACSCGDFW 874



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 116/440 (26%), Positives = 198/440 (45%), Gaps = 30/440 (6%)

Query: 162 ARKVFDKMPEKDT------VLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAA 215
           AR   D++P +D       VL++    G++     Q S+       R GG  +DS +++ 
Sbjct: 51  ARYPLDEIPRRDAAVGANRVLFDYARRGMVPEVLDQFSV------ARRGGVLVDSATLSC 104

Query: 216 VLPAVAEVQELRLGMEIQCLGLKLGFHDH--VYVLTGLVSFYSKCGEVERAELLFRDIVR 273
           VL A   V +  LG ++ CL +K G HD   V   T LV  Y KCG V     +F  + +
Sbjct: 105 VLKACRSVPDRVLGEQLHCLCVKCG-HDRGEVSAGTSLVDMYMKCGSVCEGIEVFEGMPK 163

Query: 274 PDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCI 333
            ++++  ++++G          + LF ++ A     N  T   ++      G L L   +
Sbjct: 164 KNVVTWTSLLTGCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVASQGALDLGQRV 223

Query: 334 HSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLT 393
           H+  +K G  S+  V  +L  +Y++   +E A+ +F+    + + SWN ++AG   N   
Sbjct: 224 HAQSVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSWNTLMAGLQLNECE 283

Query: 394 EEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTAL 453
            EA+ LF E +A+       T ++++  CA L  ++L + +H  V    F     V TAL
Sbjct: 284 LEALQLFHESRATMGKMTQSTYATVIKLCANLKQLALARQLHSCVLKHGFHLTGNVMTAL 343

Query: 454 IDMYAKCGNIVEARELFDLMS-HKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPS 512
            D Y+KCG + +A  +F + +  ++ V+W  +ISG   +G    A+ LFS M    + P+
Sbjct: 344 ADAYSKCGELADALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMREDRVMPN 403

Query: 513 GVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDIL----GRAGQLEKA 568
             T+ ++L A            I    IH    K   +H   +   L     + G  E A
Sbjct: 404 EFTYSAMLKA---------SLSILPPQIHAQVIKTNYQHIPSVGTALLASYSKFGSTEDA 454

Query: 569 LEFIKGLAVEPGPAVWGALL 588
           L   K +  +     W A+L
Sbjct: 455 LSIFK-MIEQKDVVAWSAML 473



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 116/482 (24%), Positives = 219/482 (45%), Gaps = 61/482 (12%)

Query: 8   SRNLFLSLLKGAKTQSQLT---QTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALF 64
           +++ + +++K      QL    Q H+ ++ HGF    + +T LA   S       A  +F
Sbjct: 301 TQSTYATVIKLCANLKQLALARQLHSCVLKHGFHLTGNVMTALADAYSKCGELADALNIF 360

Query: 65  -FSIPKPDLFLFNVIIRG-FSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACC 122
             +    ++  +  II G   N ++P + + F + +R++  + P+ FTYS +L A     
Sbjct: 361 SMTTGSRNVVSWTAIISGCIQNGDIPLAVVLF-SRMREDRVM-PNEFTYSAMLKA----- 413

Query: 123 DRSIGVL---LHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNS 179
             S+ +L   +H   I + Y     VG AL+  Y KF   + A  +F  + +KD V W++
Sbjct: 414 --SLSILPPQIHAQVIKTNYQHIPSVGTALLASYSKFGSTEDALSIFKMIEQKDVVAWSA 471

Query: 180 MISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVA-EVQELRLGMEIQCLGLK 238
           M+S   +    + + ++F  M    G   +  ++++V+ A A     +  G +   + +K
Sbjct: 472 MLSCHAQAGDCEGATYLFNKMAIQ-GIKPNEFTISSVIDACACPSAGVDQGRQFHAISIK 530

Query: 239 LGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRL 298
             +HD + V + LVS YS+ G ++ A+++F      DL+S N+MISGY  +G +  ++  
Sbjct: 531 YRYHDAICVSSALVSMYSRKGNIDSAQIVFERQTDRDLVSWNSMISGYAQHGYSMKAIET 590

Query: 299 FRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSR 358
           FRQ+ AS  +++  T + +I             C H+  +  G     S++         
Sbjct: 591 FRQMEASGIQMDGVTFLAVI-----------MGCTHNGLVVEGQQYFDSMVR-------- 631

Query: 359 LNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTV--- 415
                      D     ++  +  M+  Y++ G  +E +SL ++M      P P      
Sbjct: 632 -----------DHKINPTMEHYACMVDLYSRAGKLDETMSLIRDM------PFPAGAMVW 674

Query: 416 SSILSACAQLGAISLGKW-VHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMS 474
            ++L AC     + LGK+   +L+     +S+ YV   L ++YA  G   E  E+  LM 
Sbjct: 675 RTLLGACRVHKNVELGKFSADKLLSLEPHDSSTYV--LLSNIYAAAGKWKERDEVRKLMD 732

Query: 475 HK 476
           ++
Sbjct: 733 YR 734



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 55/179 (30%), Positives = 87/179 (48%), Gaps = 2/179 (1%)

Query: 359 LNEMEAARKLFDESSEKSLA-SWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSS 417
           L +   AR   DE   +  A   N ++  Y + G+  E +  F   +   V  +  T+S 
Sbjct: 45  LRDPPGARYPLDEIPRRDAAVGANRVLFDYARRGMVPEVLDQFSVARRGGVLVDSATLSC 104

Query: 418 ILSACAQLGAISLGKWVHEL-VKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHK 476
           +L AC  +    LG+ +H L VK  +    +   T+L+DMY KCG++ E  E+F+ M  K
Sbjct: 105 VLKACRSVPDRVLGEQLHCLCVKCGHDRGEVSAGTSLVDMYMKCGSVCEGIEVFEGMPKK 164

Query: 477 SEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEI 535
           + VTW ++++G        E + LF  M   GI P+  TF SVL A +  G +  G  +
Sbjct: 165 NVVTWTSLLTGCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVASQGALDLGQRV 223


>gi|356518183|ref|XP_003527761.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
            [Glycine max]
          Length = 1582

 Score =  490 bits (1261), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 273/716 (38%), Positives = 405/716 (56%), Gaps = 5/716 (0%)

Query: 71   DLFLFNVIIRGF-SNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVL 129
            D+  +N  +  F    E  ++  CF   +  N+ +  D  T+  +LS  +      +G  
Sbjct: 870  DVIAWNKTLSWFLQRGETWEAVDCFVDMI--NSRVACDGLTFVVMLSVVAGLNCLELGKQ 927

Query: 130  LHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCC 189
            +HG  + SG    + VG  L+++Y K   V  AR VF +M E D V WN+MISG   +  
Sbjct: 928  IHGIVVRSGLDQVVSVGNCLINMYVKTGSVSRARTVFWQMNEVDLVSWNTMISGCALSGL 987

Query: 190  FQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQE-LRLGMEIQCLGLKLGFHDHVYVL 248
             + S+ +F D++R GG   D  +VA+VL A + +     L  +I    +K G     +V 
Sbjct: 988  EECSVGMFVDLLR-GGLLPDQFTVASVLRACSSLGGGCHLATQIHACAMKAGVVLDSFVS 1046

Query: 249  TGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAER 308
            T L+  YSK G++E AE LF +    DL S NAM+ GY  +G    +LRL+  +  S ER
Sbjct: 1047 TTLIDVYSKSGKMEEAEFLFVNQDGFDLASWNAMMHGYIVSGDFPKALRLYILMQESGER 1106

Query: 309  VNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKL 368
             N  T+            L     I +  +K G   +  V++ +  +Y +  EME+AR++
Sbjct: 1107 ANQITLANAAKAAGGLVGLKQGKQIQAVVVKRGFNLDLFVISGVLDMYLKCGEMESARRI 1166

Query: 369  FDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAI 428
            F+E       +W  MI+G  +NG  E A+  +  M+ SKV P+  T ++++ AC+ L A+
Sbjct: 1167 FNEIPSPDDVAWTTMISGCVENGQEEHALFTYHHMRLSKVQPDEYTFATLVKACSLLTAL 1226

Query: 429  SLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGY 488
              G+ +H      N   + +V T+L+DMYAKCGNI +AR LF   +     +WN MI G 
Sbjct: 1227 EQGRQIHANTVKLNCAFDPFVMTSLVDMYAKCGNIEDARGLFKRTNTSRIASWNAMIVGL 1286

Query: 489  GLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPL 548
              HG+  EALQ F EM   G+ P  VTF+ VL ACSH+GLV E  E F SM   +G +P 
Sbjct: 1287 AQHGNAEEALQFFEEMKSRGVTPDRVTFIGVLSACSHSGLVSEAYENFYSMQKIYGIEPE 1346

Query: 549  AEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLF 608
             EHY+C+VD L RAG++ +A + I  +  E   +++  LL AC +  D    +  +EKL 
Sbjct: 1347 IEHYSCLVDALSRAGRIREAEKVISSMPFEASASMYRTLLNACRVQVDRETGKRVAEKLL 1406

Query: 609  ELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGD 668
             L+P +   +VLLSN+Y+A   +   A+ R +++K  + K PG + +++    H+F +GD
Sbjct: 1407 ALEPSDSAAYVLLSNVYAAANQWENVASARNMMRKANVKKDPGFSWVDLKNKVHLFVAGD 1466

Query: 669  QLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIA 728
            + H ++  IY  +E +  ++RE G+  +T  AL DVEEE+KE  +  HSEKLAIA+GL+ 
Sbjct: 1467 RSHEETDVIYNKVEYIMKRIREEGYLPDTDFALVDVEEEDKECSLYYHSEKLAIAYGLMK 1526

Query: 729  TEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
            T P T +R+IKNLRVC DCH A K+ISKV  R +V+RDANRFHHF+ GVCSCGDYW
Sbjct: 1527 TPPSTTLRVIKNLRVCGDCHNAIKYISKVFEREVVLRDANRFHHFRSGVCSCGDYW 1582



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 129/474 (27%), Positives = 232/474 (48%), Gaps = 8/474 (1%)

Query: 11   LFLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKP 70
            + LS++ G        Q H  ++  G    +S    L +      +   AR +F+ + + 
Sbjct: 911  VMLSVVAGLNCLELGKQIHGIVVRSGLDQVVSVGNCLINMYVKTGSVSRARTVFWQMNEV 970

Query: 71   DLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASAC---CDRSIG 127
            DL  +N +I G + + + + S+  +  L +   L PD FT + VL A S+    C   + 
Sbjct: 971  DLVSWNTMISGCALSGLEECSVGMFVDLLRG-GLLPDQFTVASVLRACSSLGGGC--HLA 1027

Query: 128  VLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKN 187
              +H  A+ +G   D FV   L+D+Y K   ++ A  +F      D   WN+M+ G + +
Sbjct: 1028 TQIHACAMKAGVVLDSFVSTTLIDVYSKSGKMEEAEFLFVNQDGFDLASWNAMMHGYIVS 1087

Query: 188  CCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYV 247
              F  ++ ++  +++  G   +  ++A    A   +  L+ G +IQ + +K GF+  ++V
Sbjct: 1088 GDFPKALRLY-ILMQESGERANQITLANAAKAAGGLVGLKQGKQIQAVVVKRGFNLDLFV 1146

Query: 248  LTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAE 307
            ++G++  Y KCGE+E A  +F +I  PD ++   MISG   NG+ E +L  +  +  S  
Sbjct: 1147 ISGVLDMYLKCGEMESARRIFNEIPSPDDVAWTTMISGCVENGQEEHALFTYHHMRLSKV 1206

Query: 308  RVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARK 367
            + +  T   L+        L     IH+  +K     +  V+T+L  +Y++   +E AR 
Sbjct: 1207 QPDEYTFATLVKACSLLTALEQGRQIHANTVKLNCAFDPFVMTSLVDMYAKCGNIEDARG 1266

Query: 368  LFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGA 427
            LF  ++   +ASWNAMI G  Q+G  EEA+  F+EM++  V P+ VT   +LSAC+  G 
Sbjct: 1267 LFKRTNTSRIASWNAMIVGLAQHGNAEEALQFFEEMKSRGVTPDRVTFIGVLSACSHSGL 1326

Query: 428  ISLG-KWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVT 480
            +S   +  + + K    E  I   + L+D  ++ G I EA ++   M  ++  +
Sbjct: 1327 VSEAYENFYSMQKIYGIEPEIEHYSCLVDALSRAGRIREAEKVISSMPFEASAS 1380



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 153/589 (25%), Positives = 263/589 (44%), Gaps = 39/589 (6%)

Query: 12   FLSLLKGAKTQSQL---TQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIP 68
            + S+L+ A   S L    + HA+I+  G   D      L    S   +   AR LF + P
Sbjct: 629  WFSILRHAIAASDLPLGKRAHARILTSGHHPDRFLTNNLITMYSKCGSLSSARKLFDTTP 688

Query: 69   KP--DLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSI 126
                DL  +N I+   ++    +     +  LR+ + ++    T + V          S 
Sbjct: 689  DTSRDLVTWNAILSAHADK--ARDGFHLFRLLRR-SFVSATRHTLAPVFKMCLLSASPSA 745

Query: 127  GVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMK 186
               LHG+A+  G   D+FV  ALV++Y KF  ++ AR +FD M  +D VLWN M+   + 
Sbjct: 746  AESLHGYAVKIGLQWDVFVAGALVNIYAKFGRIREARVLFDGMGLRDVVLWNVMMKAYVD 805

Query: 187  NCCFQDSIWVFGDMVRNGGTWLDST--SVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDH 244
                 +++ +F +  R G    D T  ++A V+ +   V E +L  +++  G KL     
Sbjct: 806  TGLEYEALLLFSEFNRTGLRPDDVTLCTLARVVKSKQNVLEWQL-KQLKAYGTKL----F 860

Query: 245  VYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLA 304
            +Y      S                     D+I+ N  +S +   G+T  ++  F  ++ 
Sbjct: 861  MYDDDDDGS---------------------DVIAWNKTLSWFLQRGETWEAVDCFVDMIN 899

Query: 305  SAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEA 364
            S    +  T V ++ V      L L   IH   ++SG+    SV   L  +Y +   +  
Sbjct: 900  SRVACDGLTFVVMLSVVAGLNCLELGKQIHGIVVRSGLDQVVSVGNCLINMYVKTGSVSR 959

Query: 365  ARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQ 424
            AR +F + +E  L SWN MI+G   +GL E ++ +F ++    + P+  TV+S+L AC+ 
Sbjct: 960  ARTVFWQMNEVDLVSWNTMISGCALSGLEECSVGMFVDLLRGGLLPDQFTVASVLRACSS 1019

Query: 425  L-GAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNT 483
            L G   L   +H          + +VST LID+Y+K G + EA  LF         +WN 
Sbjct: 1020 LGGGCHLATQIHACAMKAGVVLDSFVSTTLIDVYSKSGKMEEAEFLFVNQDGFDLASWNA 1079

Query: 484  MISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDH 543
            M+ GY + G   +AL+L+  M  SG R + +T  +   A      +++G +I Q+++   
Sbjct: 1080 MMHGYIVSGDFPKALRLYILMQESGERANQITLANAAKAAGGLVGLKQGKQI-QAVVVKR 1138

Query: 544  GFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACM 592
            GF       + ++D+  + G++E A      +   P    W  ++  C+
Sbjct: 1139 GFNLDLFVISGVLDMYLKCGEMESARRIFNEIP-SPDDVAWTTMISGCV 1186



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 132/493 (26%), Positives = 221/493 (44%), Gaps = 45/493 (9%)

Query: 114  VLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPE-- 171
            +L  A A  D  +G   H   + SG+  D F+   L+ +Y K   + SARK+FD  P+  
Sbjct: 632  ILRHAIAASDLPLGKRAHARILTSGHHPDRFLTNNLITMYSKCGSLSSARKLFDTTPDTS 691

Query: 172  KDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGME 231
            +D V WN+++S        +D   +F  ++R         ++A V               
Sbjct: 692  RDLVTWNAILSAHADKA--RDGFHLF-RLLRRSFVSATRHTLAPVFKMCLLSASPSAAES 748

Query: 232  IQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGK 291
            +    +K+G    V+V   LV+ Y+K G +  A +LF  +   D++  N M+  Y   G 
Sbjct: 749  LHGYAVKIGLQWDVFVAGALVNIYAKFGRIREARVLFDGMGLRDVVLWNVMMKAYVDTGL 808

Query: 292  TESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTA 351
               +L LF +   +  R +  T+  L  V                     + S  +VL  
Sbjct: 809  EYEALLLFSEFNRTGLRPDDVTLCTLARV---------------------VKSKQNVLEW 847

Query: 352  LSTVYSRLNEMEA-ARKLF---DESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASK 407
                  +L +++A   KLF   D+     + +WN  ++ + Q G T EA+  F +M  S+
Sbjct: 848  ------QLKQLKAYGTKLFMYDDDDDGSDVIAWNKTLSWFLQRGETWEAVDCFVDMINSR 901

Query: 408  VAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEAR 467
            VA + +T   +LS  A L  + LGK +H +V     +  + V   LI+MY K G++  AR
Sbjct: 902  VACDGLTFVVMLSVVAGLNCLELGKQIHGIVVRSGLDQVVSVGNCLINMYVKTGSVSRAR 961

Query: 468  ELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAG 527
             +F  M+    V+WNTMISG  L G    ++ +F ++L  G+ P   T  SVL ACS  G
Sbjct: 962  TVFWQMNEVDLVSWNTMISGCALSGLEECSVGMFVDLLRGGLLPDQFTVASVLRACSSLG 1021

Query: 528  LVREGDEIFQSMIHDHGFKP--LAEHY--ACMVDILGRAGQLEKALEFIKGLAVEPGPAV 583
                G     + IH    K   + + +    ++D+  ++G++E+A EF+         A 
Sbjct: 1022 ----GGCHLATQIHACAMKAGVVLDSFVSTTLIDVYSKSGKMEEA-EFLFVNQDGFDLAS 1076

Query: 584  WGALLGACMIHKD 596
            W A++   ++  D
Sbjct: 1077 WNAMMHGYIVSGD 1089


>gi|115453719|ref|NP_001050460.1| Os03g0441400 [Oryza sativa Japonica Group]
 gi|108709057|gb|ABF96852.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|113548931|dbj|BAF12374.1| Os03g0441400 [Oryza sativa Japonica Group]
 gi|215767379|dbj|BAG99607.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 837

 Score =  490 bits (1261), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 267/725 (36%), Positives = 411/725 (56%), Gaps = 2/725 (0%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           AR LF  +P+ ++  F  +++  +     +++   +  LR       + F  + +L  A 
Sbjct: 115 ARRLFDRMPERNMVSFVTLVQAHAQRGDFEAAAALFRRLRWE-GHEVNQFVLTTMLKLAI 173

Query: 120 ACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNS 179
           A     +   +H  A   G+  + FVG+ L+D Y   S V  A  VF+ +  KD V+W +
Sbjct: 174 AMDAAGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTA 233

Query: 180 MISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKL 239
           M+S   +N C +++  VF  M R  G   +  ++ +VL A   +  + LG  I    +K 
Sbjct: 234 MVSCYSENDCPENAFRVFSKM-RVSGCKPNPFALTSVLKAAVCLPSVVLGKGIHGCAIKT 292

Query: 240 GFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLF 299
                 +V   L+  Y+KCG+++ A L F  I   D+I  + MIS Y  + + E +  LF
Sbjct: 293 LNDTEPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELF 352

Query: 300 RQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRL 359
            +L+ S+   N  ++  ++        L     IH+  +K G  S+  V  AL   Y++ 
Sbjct: 353 LRLMRSSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKC 412

Query: 360 NEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSIL 419
           N+M+++ K+F    + +  SWN ++ G++Q+GL EEA+S+F EMQA+++    VT SS+L
Sbjct: 413 NDMDSSLKIFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVL 472

Query: 420 SACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEV 479
            ACA   +I     +H  ++   F ++  +  +LID YAKCG I +A ++F  +  +  +
Sbjct: 473 RACASTASIRHAGQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHLMERDII 532

Query: 480 TWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSM 539
           +WN +ISGY LHG   +AL+LF  M  S +  + +TF+++L  CS  GLV  G  +F SM
Sbjct: 533 SWNAIISGYALHGQAADALELFDRMNKSNVESNDITFVALLSVCSSTGLVNHGLSLFDSM 592

Query: 540 IHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNL 599
             DHG KP  EHY C+V +LGRAG+L  AL+FI  +   P   VW ALL +C+IHK+  L
Sbjct: 593 RIDHGIKPSMEHYTCIVRLLGRAGRLNDALQFIGDIPSAPSAMVWRALLSSCIIHKNVAL 652

Query: 600 ARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGG 659
            R ++EK+ E++P++   +VLLSN+Y+A     Q A +R+ ++   + K PG + +E+ G
Sbjct: 653 GRFSAEKILEIEPQDETTYVLLSNMYAAAGSLDQVALLRKSMRNIGVRKVPGLSWVEIKG 712

Query: 660 TPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEK 719
             H F+ G   HP    I AMLE LN K    G+  +    LHDV++E+K  M+ VHSE+
Sbjct: 713 EIHAFSVGSVDHPDMRVINAMLEWLNLKTSREGYIPDINVVLHDVDKEQKTRMLWVHSER 772

Query: 720 LAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCS 779
           LA+A+GL+ T PG  IRI+KNLR CLDCHTA   ISK+  R I+VRD NRFHHF+ G CS
Sbjct: 773 LALAYGLVMTPPGHPIRILKNLRSCLDCHTAFTVISKIVKREIIVRDINRFHHFEDGKCS 832

Query: 780 CGDYW 784
           CGDYW
Sbjct: 833 CGDYW 837



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 139/491 (28%), Positives = 239/491 (48%), Gaps = 7/491 (1%)

Query: 107 DNFTYSFVLSAASACCDRSIGVLLHGHAIV-SGYGS-DLFVGAALVDLYFKFSWVKSARK 164
           D+F  +  L    A  D   G  +HGH +   G G  DLF    L+++Y K   + SAR+
Sbjct: 58  DSFACARQLQGCIARGDARGGRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLGPLASARR 117

Query: 165 VFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQ 224
           +FD+MPE++ V + +++    +   F+ +  +F  + R  G  ++   +  +L     + 
Sbjct: 118 LFDRMPERNMVSFVTLVQAHAQRGDFEAAAALFRRL-RWEGHEVNQFVLTTMLKLAIAMD 176

Query: 225 ELRLGMEIQCLGLKLGFHDH-VYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMI 283
              L   +     KLG HDH  +V +GL+  YS C  V  AE +F  IVR D +   AM+
Sbjct: 177 AAGLAGGVHSCAWKLG-HDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMV 235

Query: 284 SGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIV 343
           S Y+ N   E++ R+F ++  S  + N   +  ++        + L   IH   +K+   
Sbjct: 236 SCYSENDCPENAFRVFSKMRVSGCKPNPFALTSVLKAAVCLPSVVLGKGIHGCAIKTLND 295

Query: 344 SNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEM 403
           +   V  AL  +Y++  +++ AR  F+      +   + MI+ Y Q+   E+A  LF  +
Sbjct: 296 TEPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRL 355

Query: 404 QASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNI 463
             S V PN  ++SS+L AC  +  +  GK +H        ES+++V  AL+D YAKC ++
Sbjct: 356 MRSSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDM 415

Query: 464 VEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYAC 523
             + ++F  +   +EV+WNT++ G+   G G EAL +F EM  + +  + VT+ SVL AC
Sbjct: 416 DSSLKIFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRAC 475

Query: 524 SHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAV 583
           +    +R   +I  S I    F         ++D   + G +  AL+  + L +E     
Sbjct: 476 ASTASIRHAGQIHCS-IEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHL-MERDIIS 533

Query: 584 WGALLGACMIH 594
           W A++    +H
Sbjct: 534 WNAIISGYALH 544



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 99/358 (27%), Positives = 165/358 (46%), Gaps = 23/358 (6%)

Query: 207 WL-DSTSVAAVLPAVAEVQELRLGMEIQ-CL--GLKLG---FHDHVYVLTG--------- 250
           WL D  +  A+LP+V  V       ++Q C+  G   G    H HV    G         
Sbjct: 40  WLEDELTSLAILPSVPGVDSFACARQLQGCIARGDARGGRAVHGHVVRRGGVGRLDLFCA 99

Query: 251 --LVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAER 308
             L++ Y K G +  A  LF  +   +++S   ++  +   G  E++  LFR+L      
Sbjct: 100 NVLLNMYGKLGPLASARRLFDRMPERNMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHE 159

Query: 309 VNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKL 368
           VN   +  ++ +        L   +HS   K G   N+ V + L   YS  + +  A  +
Sbjct: 160 VNQFVLTTMLKLAIAMDAAGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHV 219

Query: 369 FDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAI 428
           F+    K    W AM++ Y++N   E A  +F +M+ S   PNP  ++S+L A   L ++
Sbjct: 220 FNGIVRKDAVVWTAMVSCYSENDCPENAFRVFSKMRVSGCKPNPFALTSVLKAAVCLPSV 279

Query: 429 SLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGY 488
            LGK +H        ++  +V  AL+DMYAKCG+I +AR  F+++ +   +  + MIS Y
Sbjct: 280 VLGKGIHGCAIKTLNDTEPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRY 339

Query: 489 GLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFK 546
                  +A +LF  ++ S + P+  +  SVL AC++   +      F   IH+H  K
Sbjct: 340 AQSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQACTNMVQLD-----FGKQIHNHAIK 392


>gi|357128220|ref|XP_003565772.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g13230, mitochondrial-like [Brachypodium distachyon]
          Length = 1206

 Score =  489 bits (1259), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 269/725 (37%), Positives = 412/725 (56%), Gaps = 2/725 (0%)

Query: 60   ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
            A  +F  +P+ ++  F  +++G +     + +   +  LR       + F  + VL    
Sbjct: 484  AHRVFDGLPERNMVSFVTLVQGHALRGEFEEASALFQRLRWEGHEV-NQFVLTTVLKLVV 542

Query: 120  ACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNS 179
            A     +   +H  A   G+  + FVG+AL+D Y     V  AR+VFD +  KD V W +
Sbjct: 543  AMDTLGLAWGVHACACKLGHDRNAFVGSALIDAYSMCGVVSDARRVFDGIVGKDAVAWTA 602

Query: 180  MISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKL 239
            M+S   +N C ++++ +F  M R   + L+  ++ +VL A   +  + LG  I    +K 
Sbjct: 603  MVSCYSENDCPENTLQIFSKM-RVAVSKLNPFALTSVLRAAVCLSSVVLGKGIHACSVKT 661

Query: 240  GFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLF 299
             +    +V   L+  Y+KCG +E A L F  +   D+I  + MIS Y    + E +  LF
Sbjct: 662  LYDTERHVYGALLDMYAKCGNIEDARLAFEMVTNDDVILWSLMISRYAQCNQNEQAFELF 721

Query: 300  RQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRL 359
             +++ S+   N  ++  ++        L L   IH+  +K G  S   V  AL  +Y++ 
Sbjct: 722  IRMMRSSVSPNEFSLSSVLQACANMPLLDLGKQIHNHAIKIGHESELFVGNALIDLYAKC 781

Query: 360  NEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSIL 419
            ++ME++ ++F    + +  SWN +I GY+++G  E A+S+F+EM+A+ V    VT SS+L
Sbjct: 782  SDMESSLEIFSSLRDVNEVSWNTIIVGYSKSGFGEAALSVFREMRAASVPSTQVTYSSVL 841

Query: 420  SACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEV 479
             ACA   +I+    VH L++   F S+  VS +LID YAKCG I +ARE+F+ +     V
Sbjct: 842  RACASTASINHVGQVHCLIEKSTFNSDTIVSNSLIDSYAKCGCIRDAREIFETLKECDLV 901

Query: 480  TWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSM 539
            +WN +ISGY +HG    A +LF  M  + I+ + +TF+++L  C   GLV +G  +F SM
Sbjct: 902  SWNAIISGYAVHGQAAMAQELFDMMSKNSIKANDITFVALLSVCGSTGLVSQGLSLFDSM 961

Query: 540  IHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNL 599
              DHG +P  EHY C+V +LGRAG+L  AL FI  +   P   VW ALL +C++HK+  L
Sbjct: 962  RLDHGIEPSMEHYTCIVRLLGRAGRLNDALNFIGDIPSAPSAMVWRALLSSCIVHKNVEL 1021

Query: 600  ARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGG 659
             R ++EK+ E++P++   +VLLSN+YSA     Q A  R+ ++   + K PG + +E+ G
Sbjct: 1022 GRFSAEKVLEIEPQDETTYVLLSNMYSAAGSLDQVAFFRKSMRNIGVRKEPGLSWVEIKG 1081

Query: 660  TPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEK 719
              H F+ G + HP    I AMLE LN K    G+  +T   LHD+EEE+K  M+ VHSE+
Sbjct: 1082 EVHAFSVGSEDHPCMRVINAMLEWLNLKAIREGYVPDTDEVLHDLEEEQKVRMLWVHSER 1141

Query: 720  LAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCS 779
            LA+A+GL+ T PG  IRI+KNLR CLDCH   K ISK+  + I+VRD NRFHHF+ G CS
Sbjct: 1142 LALAYGLVMTPPGHPIRIMKNLRSCLDCHAIFKVISKIVKQEIIVRDINRFHHFEEGTCS 1201

Query: 780  CGDYW 784
            CGDYW
Sbjct: 1202 CGDYW 1206



 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 145/510 (28%), Positives = 251/510 (49%), Gaps = 9/510 (1%)

Query: 107 DNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGS--DLFVGAALVDLYFKFSWVKSARK 164
           D++ Y+ +L    A  D   G  +HGH + SG  +  DLF    L+++Y K     SA +
Sbjct: 427 DSYAYARLLQGCVARGDARGGRAVHGHVVRSGGLARLDLFCANVLLNMYTKVGPFGSAHR 486

Query: 165 VFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQ 224
           VFD +PE++ V + +++ G      F+++  +F   +R  G  ++   +  VL  V  + 
Sbjct: 487 VFDGLPERNMVSFVTLVQGHALRGEFEEASALF-QRLRWEGHEVNQFVLTTVLKLVVAMD 545

Query: 225 ELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMIS 284
            L L   +     KLG   + +V + L+  YS CG V  A  +F  IV  D ++  AM+S
Sbjct: 546 TLGLAWGVHACACKLGHDRNAFVGSALIDAYSMCGVVSDARRVFDGIVGKDAVAWTAMVS 605

Query: 285 GYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVS 344
            Y+ N   E++L++F ++  +  ++N   +  ++        + L   IH+  +K+   +
Sbjct: 606 CYSENDCPENTLQIFSKMRVAVSKLNPFALTSVLRAAVCLSSVVLGKGIHACSVKTLYDT 665

Query: 345 NSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQ 404
              V  AL  +Y++   +E AR  F+  +   +  W+ MI+ Y Q    E+A  LF  M 
Sbjct: 666 ERHVYGALLDMYAKCGNIEDARLAFEMVTNDDVILWSLMISRYAQCNQNEQAFELFIRMM 725

Query: 405 ASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIV 464
            S V+PN  ++SS+L ACA +  + LGK +H        ES ++V  ALID+YAKC ++ 
Sbjct: 726 RSSVSPNEFSLSSVLQACANMPLLDLGKQIHNHAIKIGHESELFVGNALIDLYAKCSDME 785

Query: 465 EARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACS 524
            + E+F  +   +EV+WNT+I GY   G G  AL +F EM  + +  + VT+ SVL AC+
Sbjct: 786 SSLEIFSSLRDVNEVSWNTIIVGYSKSGFGEAALSVFREMRAASVPSTQVTYSSVLRACA 845

Query: 525 HAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVW 584
               +    ++   +I    F         ++D   + G +  A E  + L  E     W
Sbjct: 846 STASINHVGQV-HCLIEKSTFNSDTIVSNSLIDSYAKCGCIRDAREIFETLK-ECDLVSW 903

Query: 585 GALLGACMIHKDTNLARVASEKLFELDPEN 614
            A++    +H    +A    ++LF++  +N
Sbjct: 904 NAIISGYAVHGQAAMA----QELFDMMSKN 929


>gi|356519174|ref|XP_003528249.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18485-like [Glycine max]
          Length = 975

 Score =  489 bits (1259), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 260/687 (37%), Positives = 393/687 (57%)

Query: 98  LRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFS 157
           + +   L PD  T   V+ A +A  +  +G+++HG A   G   ++ V  +LVD+Y K  
Sbjct: 289 ISEEEGLVPDVATMVTVIPACAAVGEVRMGMVVHGLAFKLGITEEVTVNNSLVDMYSKCG 348

Query: 158 WVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVL 217
           ++  AR +FD    K+ V WN++I G  K   F+    +  +M R     ++  +V  VL
Sbjct: 349 YLGEARALFDMNGGKNVVSWNTIIWGYSKEGDFRGVFELLQEMQREEKVRVNEVTVLNVL 408

Query: 218 PAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLI 277
           PA +   +L    EI     + GF     V    V+ Y+KC  ++ AE +F  +    + 
Sbjct: 409 PACSGEHQLLSLKEIHGYAFRHGFLKDELVANAFVAAYAKCSSLDCAERVFCGMEGKTVS 468

Query: 278 SCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFC 337
           S NA+I  +  NG    SL LF  ++ S    +  TI  L+        L     IH F 
Sbjct: 469 SWNALIGAHAQNGFPGKSLDLFLVMMDSGMDPDRFTIGSLLLACARLKFLRCGKEIHGFM 528

Query: 338 LKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAI 397
           L++G+  +  +  +L ++Y + + M   + +FD+   KSL  WN MI G++QN L  EA+
Sbjct: 529 LRNGLELDEFIGISLMSLYIQCSSMLLGKLIFDKMENKSLVCWNVMITGFSQNELPCEAL 588

Query: 398 SLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMY 457
             F++M +  + P  + V+ +L AC+Q+ A+ LGK VH      +   + +V+ ALIDMY
Sbjct: 589 DTFRQMLSGGIKPQEIAVTGVLGACSQVSALRLGKEVHSFALKAHLSEDAFVTCALIDMY 648

Query: 458 AKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFL 517
           AKCG + +++ +FD ++ K E  WN +I+GYG+HGHGL+A++LF  M + G RP   TFL
Sbjct: 649 AKCGCMEQSQNIFDRVNEKDEAVWNVIIAGYGIHGHGLKAIELFELMQNKGGRPDSFTFL 708

Query: 518 SVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAV 577
            VL AC+HAGLV EG +    M + +G KP  EHYAC+VD+LGRAGQL +AL+ +  +  
Sbjct: 709 GVLIACNHAGLVTEGLKYLGQMQNLYGVKPKLEHYACVVDMLGRAGQLTEALKLVNEMPD 768

Query: 578 EPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATV 637
           EP   +W +LL +C  + D  +    S+KL EL+P     +VLLSN+Y+    + +   V
Sbjct: 769 EPDSGIWSSLLSSCRNYGDLEIGEEVSKKLLELEPNKAENYVLLSNLYAGLGKWDEVRKV 828

Query: 638 RQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTET 697
           RQ +K+  L K  GC+ IE+GG  + F   D    +S  I     KL  K+ + G++ +T
Sbjct: 829 RQRMKENGLHKDAGCSWIEIGGMVYRFLVSDGSLSESKKIQQTWIKLEKKISKIGYKPDT 888

Query: 698 VTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKV 757
              LH++EEE K  ++K HSEKLAI+FGL+ T  GT +R+ KNLR+C+DCH A K +SKV
Sbjct: 889 SCVLHELEEEGKIKILKSHSEKLAISFGLLNTAKGTTLRVCKNLRICVDCHNAIKLVSKV 948

Query: 758 TGRVIVVRDANRFHHFKGGVCSCGDYW 784
             R I+VRD  RFHHFK G+C+CGD+W
Sbjct: 949 VKRDIIVRDNKRFHHFKNGLCTCGDFW 975



 Score =  283 bits (723), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 170/563 (30%), Positives = 285/563 (50%), Gaps = 5/563 (0%)

Query: 35  HGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICF 94
           H  +ND+   T++    S   +   +R +F +  + DLFL+N ++ G+S N + + +I  
Sbjct: 122 HKLRNDVVLSTRIIAMYSACGSPSDSRGVFDAAKEKDLFLYNALLSGYSRNALFRDAISL 181

Query: 95  YTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYF 154
           +  L   T L PDNFT   V  A +   D  +G  +H  A+ +G  SD FVG AL+ +Y 
Sbjct: 182 FLELLSATDLAPDNFTLPCVAKACAGVADVELGEAVHALALKAGGFSDAFVGNALIAMYG 241

Query: 155 KFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMV--RNGGTWLDSTS 212
           K  +V+SA KVF+ M  ++ V WNS++    +N  F +   VF  ++     G   D  +
Sbjct: 242 KCGFVESAVKVFETMRNRNLVSWNSVMYACSENGGFGECCGVFKRLLISEEEGLVPDVAT 301

Query: 213 VAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIV 272
           +  V+PA A V E+R+GM +  L  KLG  + V V   LV  YSKCG +  A  LF    
Sbjct: 302 MVTVIPACAAVGEVRMGMVVHGLAFKLGITEEVTVNNSLVDMYSKCGYLGEARALFDMNG 361

Query: 273 RPDLISCNAMISGYTCNGKTESSLRLFRQLLASAE-RVNSSTIVGLIPVFYPFGHLHLTN 331
             +++S N +I GY+  G       L +++    + RVN  T++ ++P       L    
Sbjct: 362 GKNVVSWNTIIWGYSKEGDFRGVFELLQEMQREEKVRVNEVTVLNVLPACSGEHQLLSLK 421

Query: 332 CIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNG 391
            IH +  + G + +  V  A    Y++ + ++ A ++F     K+++SWNA+I  + QNG
Sbjct: 422 EIHGYAFRHGFLKDELVANAFVAAYAKCSSLDCAERVFCGMEGKTVSSWNALIGAHAQNG 481

Query: 392 LTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVST 451
              +++ LF  M  S + P+  T+ S+L ACA+L  +  GK +H  +     E + ++  
Sbjct: 482 FPGKSLDLFLVMMDSGMDPDRFTIGSLLLACARLKFLRCGKEIHGFMLRNGLELDEFIGI 541

Query: 452 ALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRP 511
           +L+ +Y +C +++  + +FD M +KS V WN MI+G+  +    EAL  F +ML  GI+P
Sbjct: 542 SLMSLYIQCSSMLLGKLIFDKMENKSLVCWNVMITGFSQNELPCEALDTFRQMLSGGIKP 601

Query: 512 SGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEF 571
             +    VL ACS    +R G E+    +  H     A     ++D+  + G +E++   
Sbjct: 602 QEIAVTGVLGACSQVSALRLGKEVHSFALKAH-LSEDAFVTCALIDMYAKCGCMEQSQNI 660

Query: 572 IKGLAVEPGPAVWGALLGACMIH 594
              +  E   AVW  ++    IH
Sbjct: 661 FDRVN-EKDEAVWNVIIAGYGIH 682



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 53/209 (25%), Positives = 99/209 (47%), Gaps = 8/209 (3%)

Query: 389 QNGLTEEAISLFQE-MQASKVAPNPVTVSSI---LSACAQLGAISLGKWVHELVK-SRNF 443
            +G   +A++L     Q   V+ + ++  +I   L AC     I +G+ VH LV  S   
Sbjct: 65  DSGNLNDALNLLHSHAQNGTVSSSDISKEAIGILLRACGHHKNIHVGRKVHALVSASHKL 124

Query: 444 ESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSE 503
            +++ +ST +I MY+ CG+  ++R +FD    K    +N ++SGY  +    +A+ LF E
Sbjct: 125 RNDVVLSTRIIAMYSACGSPSDSRGVFDAAKEKDLFLYNALLSGYSRNALFRDAISLFLE 184

Query: 504 MLH-SGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRA 562
           +L  + + P   T   V  AC+    V  G+ +    +   GF       A ++ + G+ 
Sbjct: 185 LLSATDLAPDNFTLPCVAKACAGVADVELGEAVHALALKAGGFSDAFVGNA-LIAMYGKC 243

Query: 563 GQLEKALEFIKGLAVEPGPAVWGALLGAC 591
           G +E A++  + +        W +++ AC
Sbjct: 244 GFVESAVKVFETMR-NRNLVSWNSVMYAC 271


>gi|413918675|gb|AFW58607.1| hypothetical protein ZEAMMB73_481408 [Zea mays]
          Length = 694

 Score =  489 bits (1259), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 248/616 (40%), Positives = 364/616 (59%), Gaps = 1/616 (0%)

Query: 170 PEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTW-LDSTSVAAVLPAVAEVQELRL 228
           P   T  +N ++   +     +D++ +F +M+        D  + A  L + + +  L +
Sbjct: 79  PPLSTPCYNVLMRAFLHAGHPEDALHLFIEMLHAASACPADQHTAACALKSCSRMCALDV 138

Query: 229 GMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTC 288
           G  +Q   +K G     +VL+ L+  Y+ CG+V  A L+F       ++  NA+++ Y  
Sbjct: 139 GRGVQAYAVKRGLVADRFVLSSLIHMYASCGDVAAARLVFDAAEESGVVMWNAIVAAYLK 198

Query: 289 NGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSV 348
           NG     + +F+ +L      +  T+V ++      G   L   +     + G+  N  +
Sbjct: 199 NGDWMEVVEMFKGMLEVGVAFDEVTLVSVVTACGRIGDAKLGKWVAGHVDEEGLARNPKL 258

Query: 349 LTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKV 408
           +TAL  +Y++  E+  AR+LFD    + + +W+AMI+GYTQ     EA+ LF EMQ ++V
Sbjct: 259 VTALMDMYAKCGEIGKARRLFDGMQSRDVVAWSAMISGYTQADQCREALGLFSEMQLARV 318

Query: 409 APNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARE 468
            PN VT+ S+LSACA LGA+  GKWVH  V+ +       + TAL+D YAKCG I +A E
Sbjct: 319 EPNDVTMVSVLSACAVLGALETGKWVHSYVRRKRLSLTTILGTALVDFYAKCGCIDDAVE 378

Query: 469 LFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGL 528
            F+ M  K+  TW  +I G   +G G EAL+LFS M  +GI P+ VTF+ VL ACSH+ L
Sbjct: 379 AFESMPVKNSWTWTALIKGMATNGRGREALELFSSMREAGIEPTDVTFIGVLMACSHSCL 438

Query: 529 VREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALL 588
           V EG   F SM  D+G KP  EHY CMVD+LGRAG +++A +FI+ + +EP   +W ALL
Sbjct: 439 VEEGRRHFDSMARDYGIKPRVEHYGCMVDLLGRAGLVDEAYQFIRTMPIEPNAVIWRALL 498

Query: 589 GACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAK 648
            +C +H++  +   A +++  L+P + G +VLLSNIY++   +  AA VR+ +K R + K
Sbjct: 499 SSCAVHRNVGIGEEALKQIISLNPSHSGDYVLLSNIYASAGQWKDAAMVRKEMKDRGIEK 558

Query: 649 APGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEE 708
            PGC+LIE+ G    F + D  HP+   IY  +E++ G+++ AG+   T     +VEE E
Sbjct: 559 TPGCSLIELDGVVFEFFAEDSDHPELREIYQKVEEMIGRIKVAGYVPNTADVRLEVEERE 618

Query: 709 KELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDAN 768
           KE+ +  HSEKLAIAFGL+  +PG  IR+ KNLRVC DCH+ATK ISKV  R IVVRD N
Sbjct: 619 KEVSVSHHSEKLAIAFGLMKLDPGATIRLSKNLRVCADCHSATKLISKVYDREIVVRDRN 678

Query: 769 RFHHFKGGVCSCGDYW 784
            FHHFK G CSC DYW
Sbjct: 679 IFHHFKDGTCSCNDYW 694



 Score =  175 bits (443), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 138/528 (26%), Positives = 247/528 (46%), Gaps = 27/528 (5%)

Query: 23  SQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATC-----YARALFFSIPKPDLFL--F 75
           S L Q HA +I  G   +L+   K  H L +  A       YA +LF   P+P L    +
Sbjct: 30  SYLPQLHAALIKSG---ELTGSAKSFHSLLEAAAASPTLLPYAVSLFRLGPRPPLSTPCY 86

Query: 76  NVIIRGFSNNEMPKSSI-CFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHA 134
           NV++R F +   P+ ++  F   L   +A   D  T +  L + S  C   +G  +  +A
Sbjct: 87  NVLMRAFLHAGHPEDALHLFIEMLHAASACPADQHTAACALKSCSRMCALDVGRGVQAYA 146

Query: 135 IVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSI 194
           +  G  +D FV ++L+ +Y     V +AR VFD   E   V+WN++++  +KN  + + +
Sbjct: 147 VKRGLVADRFVLSSLIHMYASCGDVAAARLVFDAAEESGVVMWNAIVAAYLKNGDWMEVV 206

Query: 195 WVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSF 254
            +F  M+   G   D  ++ +V+ A   + + +LG  +     + G   +  ++T L+  
Sbjct: 207 EMFKGMLEV-GVAFDEVTLVSVVTACGRIGDAKLGKWVAGHVDEEGLARNPKLVTALMDM 265

Query: 255 YSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTI 314
           Y+KCGE+ +A  LF  +   D+++ +AMISGYT   +   +L LF ++  +    N  T+
Sbjct: 266 YAKCGEIGKARRLFDGMQSRDVVAWSAMISGYTQADQCREALGLFSEMQLARVEPNDVTM 325

Query: 315 VGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSE 374
           V ++      G L     +HS+  +  +   + + TAL   Y++   ++ A + F+    
Sbjct: 326 VSVLSACAVLGALETGKWVHSYVRRKRLSLTTILGTALVDFYAKCGCIDDAVEAFESMPV 385

Query: 375 KSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKW- 433
           K+  +W A+I G   NG   EA+ LF  M+ + + P  VT   +L AC+    +  G+  
Sbjct: 386 KNSWTWTALIKGMATNGRGREALELFSSMREAGIEPTDVTFIGVLMACSHSCLVEEGRRH 445

Query: 434 VHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMS-HKSEVTWNTMISGYGLH- 491
              + +    +  +     ++D+  + G + EA +    M    + V W  ++S   +H 
Sbjct: 446 FDSMARDYGIKPRVEHYGCMVDLLGRAGLVDEAYQFIRTMPIEPNAVIWRALLSSCAVHR 505

Query: 492 --GHGLEALQLFSEM--LHSGIRPSGVTFLSVLYACS----HAGLVRE 531
             G G EAL+    +   HSG        LS +YA +     A +VR+
Sbjct: 506 NVGIGEEALKQIISLNPSHSG----DYVLLSNIYASAGQWKDAAMVRK 549


>gi|357453927|ref|XP_003597244.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355486292|gb|AES67495.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 678

 Score =  489 bits (1259), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 268/621 (43%), Positives = 360/621 (57%), Gaps = 2/621 (0%)

Query: 165 VFDKMP-EKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEV 223
           VF K P   +T L+N+MI G++    F +++ ++  M        DS + + VL A A +
Sbjct: 59  VFHKTPTNSNTFLYNTMIRGMVSKDRFNNAVHLYASM-HKAAIVPDSFTFSFVLKACARL 117

Query: 224 QELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMI 283
               LG+ I  L  K GF   V+V T +V FYSKCG +  A  +F D+V  +++S   MI
Sbjct: 118 NLFHLGVMIHSLVFKTGFDCDVFVKTNVVCFYSKCGFLRDAWKVFDDMVVKNVVSWTGMI 177

Query: 284 SGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIV 343
            G    GK   ++ LFR LL S  R +   IV ++      G L     I     + G+ 
Sbjct: 178 CGCIEFGKFREAVDLFRGLLESGLRPDGFVIVRVLRACARLGDLESGRWIDRCMRECGLS 237

Query: 344 SNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEM 403
            N  V T+L  +Y++   ME AR +FD   EK +  W+AMI GY  NGL  EAI LF EM
Sbjct: 238 RNVFVATSLVDMYTKCGSMEEARFVFDGMVEKDIVCWSAMIQGYASNGLPREAIELFFEM 297

Query: 404 QASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNI 463
           +   V P+   +   LS+CA LGA+ LG W   L+    F SN  + T+LID YAKCG++
Sbjct: 298 RKVNVRPDCYAMVGALSSCASLGALELGNWAKGLMNYEEFLSNPVLGTSLIDFYAKCGSM 357

Query: 464 VEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYAC 523
            EA  ++ +M  K  V +N +ISG  ++G    A  +F +M   GI P+  TF+ +L  C
Sbjct: 358 EEALGVYKMMKEKDRVVFNAVISGLAMYGQVGAAFGVFGQMGKFGIPPNEHTFVGLLCGC 417

Query: 524 SHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAV 583
           +HAGLV +G   F SM HD    P  EHY CMVD+L RAG L++A   IKG+ ++    V
Sbjct: 418 THAGLVDDGRHYFNSMSHDFSVTPTIEHYGCMVDLLARAGFLDEAHNLIKGMPMKANVIV 477

Query: 584 WGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKK 643
           WG+LLG C +H++T LA    ++L EL+P N G++VLLSNIYSA R + +A  +R  V +
Sbjct: 478 WGSLLGGCRLHRETQLAEHVLKQLIELEPWNSGHYVLLSNIYSASRRWDEAEKIRSTVNE 537

Query: 644 RKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHD 703
           + + K PG + +EV G  H F  GD  HP S  IY  LE L   ++EAG+   T   L D
Sbjct: 538 KGMQKLPGYSWVEVDGVVHEFLVGDTSHPLSQKIYEKLESLFKDLKEAGYNPTTEFVLFD 597

Query: 704 VEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIV 763
           VEEEEKE  +  HSEKLA+AF LI+T     IR++KNLRVC DCH A K ISKVTGR IV
Sbjct: 598 VEEEEKEHFLGCHSEKLAVAFALISTGAKYVIRVVKNLRVCGDCHEAIKHISKVTGREIV 657

Query: 764 VRDANRFHHFKGGVCSCGDYW 784
           +RD NRFH F  G CSC DYW
Sbjct: 658 IRDNNRFHCFSDGACSCRDYW 678



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 139/505 (27%), Positives = 235/505 (46%), Gaps = 13/505 (2%)

Query: 59  YARALFFSIP-KPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSA 117
           Y   +F   P   + FL+N +IRG  + +   +++  Y  + K  A+ PD+FT+SFVL A
Sbjct: 55  YPILVFHKTPTNSNTFLYNTMIRGMVSKDRFNNAVHLYASMHK-AAIVPDSFTFSFVLKA 113

Query: 118 ASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLW 177
            +      +GV++H     +G+  D+FV   +V  Y K  +++ A KVFD M  K+ V W
Sbjct: 114 CARLNLFHLGVMIHSLVFKTGFDCDVFVKTNVVCFYSKCGFLRDAWKVFDDMVVKNVVSW 173

Query: 178 NSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGL 237
             MI G ++   F++++ +F  ++ + G   D   +  VL A A + +L  G  I     
Sbjct: 174 TGMICGCIEFGKFREAVDLFRGLLES-GLRPDGFVIVRVLRACARLGDLESGRWIDRCMR 232

Query: 238 KLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLR 297
           + G   +V+V T LV  Y+KCG +E A  +F  +V  D++  +AMI GY  NG    ++ 
Sbjct: 233 ECGLSRNVFVATSLVDMYTKCGSMEEARFVFDGMVEKDIVCWSAMIQGYASNGLPREAIE 292

Query: 298 LFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYS 357
           LF ++     R +   +VG +      G L L N           +SN  + T+L   Y+
Sbjct: 293 LFFEMRKVNVRPDCYAMVGALSSCASLGALELGNWAKGLMNYEEFLSNPVLGTSLIDFYA 352

Query: 358 RLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSS 417
           +   ME A  ++    EK    +NA+I+G    G    A  +F +M    + PN  T   
Sbjct: 353 KCGSMEEALGVYKMMKEKDRVVFNAVISGLAMYGQVGAAFGVFGQMGKFGIPPNEHTFVG 412

Query: 418 ILSACAQLGAISLGK-WVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHK 476
           +L  C   G +  G+ + + +    +    I     ++D+ A+ G + EA  L   M  K
Sbjct: 413 LLCGCTHAGLVDDGRHYFNSMSHDFSVTPTIEHYGCMVDLLARAGFLDEAHNLIKGMPMK 472

Query: 477 SEV-TWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSG-VTFLSVLYACSHAGLVREGDE 534
           + V  W +++ G  LH     A  +  +++      SG    LS +Y+ S     R  DE
Sbjct: 473 ANVIVWGSLLGGCRLHRETQLAEHVLKQLIELEPWNSGHYVLLSNIYSAS-----RRWDE 527

Query: 535 I--FQSMIHDHGFKPLAEHYACMVD 557
               +S +++ G + L  +    VD
Sbjct: 528 AEKIRSTVNEKGMQKLPGYSWVEVD 552


>gi|297734119|emb|CBI15366.3| unnamed protein product [Vitis vinifera]
          Length = 783

 Score =  488 bits (1257), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 255/673 (37%), Positives = 388/673 (57%), Gaps = 2/673 (0%)

Query: 114 VLSAASACCDRSIGVLLHGHAIVS-GYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEK 172
           +L A     D  +G  LH     S  + +D  +   ++ +Y        +R VFDK+  K
Sbjct: 111 LLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRRK 170

Query: 173 DTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEI 232
           +   WN+++S   +N  F+D++ +F +++       D+ ++  V+ A A + +L LG  I
Sbjct: 171 NLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQII 230

Query: 233 QCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISC-NAMISGYTCNGK 291
             +  K+     V+V   L++ Y KCG VE A     D++    +S  NA++ GY  N  
Sbjct: 231 HGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKRVFDLMDTKTVSSWNALLCGYAQNSD 290

Query: 292 TESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTA 351
              +L L+ Q+  S    +  TI  L+        LH    IH F L++G+  +  +  +
Sbjct: 291 PRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGLAVDPFIGIS 350

Query: 352 LSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPN 411
           L ++Y    +  AA+ LFD    +SL SWN MIAGY+QNGL +EAI+LF++M +  + P 
Sbjct: 351 LLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQPY 410

Query: 412 PVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFD 471
            + +  +  AC+QL A+ LGK +H      +   +I+VS+++IDMYAK G I  ++ +FD
Sbjct: 411 EIAIMCVCGACSQLSALRLGKELHCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRIFD 470

Query: 472 LMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVRE 531
            +  K   +WN +I+GYG+HG G EAL+LF +ML  G++P   TF  +L ACSHAGLV +
Sbjct: 471 RLREKDVASWNVIIAGYGIHGRGKEALELFEKMLRLGLKPDDFTFTGILMACSHAGLVED 530

Query: 532 GDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGAC 591
           G E F  M++ H  +P  EHY C+VD+LGRAG+++ AL  I+ +  +P   +W +LL +C
Sbjct: 531 GLEYFNQMLNLHNIEPKLEHYTCVVDMLGRAGRIDDALRLIEEMPGDPDSRIWSSLLSSC 590

Query: 592 MIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPG 651
            IH +  L    + KL EL+PE    +VL+SN+++    +     VR  +K   L K  G
Sbjct: 591 RIHGNLGLGEKVANKLLELEPEKPENYVLISNLFAGSGKWDDVRRVRGRMKDIGLQKDAG 650

Query: 652 CTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKEL 711
           C+ IEVGG  H F  GD++ P+   +     +L  K+   G+  +T + LHD+EEE+K  
Sbjct: 651 CSWIEVGGKVHNFLIGDEMLPELEEVRETWRRLEVKISSIGYTPDTGSVLHDLEEEDKIG 710

Query: 712 MMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFH 771
           +++ HSEKLAI+FGL+ T  G  +R+ KNLR+C DCH A KFISKV  R IVVRD  RFH
Sbjct: 711 ILRGHSEKLAISFGLLNTAKGLPVRVYKNLRICGDCHNAAKFISKVVNRDIVVRDNKRFH 770

Query: 772 HFKGGVCSCGDYW 784
           HF+ G+CSCGDYW
Sbjct: 771 HFRDGICSCGDYW 783



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 135/492 (27%), Positives = 254/492 (51%), Gaps = 5/492 (1%)

Query: 37  FQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYT 96
           F ND    T++    S   +   +R +F  + + +LF +N I+  ++ NE+ + ++  ++
Sbjct: 137 FCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRRKNLFQWNAIVSAYTRNELFEDAMSIFS 196

Query: 97  HLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKF 156
            L   T   PDNFT   V+ A +   D  +G ++HG A      SD+FVG AL+ +Y K 
Sbjct: 197 ELISVTEHKPDNFTLPCVIKACAGLLDLGLGQIIHGMATKMDLVSDVFVGNALIAMYGKC 256

Query: 157 SWVKSA-RKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAA 215
             V+ A ++VFD M  K    WN+++ G  +N   + ++ ++  M  + G   D  ++ +
Sbjct: 257 GLVEEAVKRVFDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMT-DSGLDPDWFTIGS 315

Query: 216 VLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPD 275
           +L A + ++ L  G EI    L+ G     ++   L+S Y  CG+   A++LF  +    
Sbjct: 316 LLLACSRMKSLHYGEEIHGFALRNGLAVDPFIGISLLSLYICCGKPFAAQVLFDGMEHRS 375

Query: 276 LISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHS 335
           L+S N MI+GY+ NG  + ++ LFRQ+L+   +     I+ +         L L   +H 
Sbjct: 376 LVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQLSALRLGKELHC 435

Query: 336 FCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEE 395
           F LK+ +  +  V +++  +Y++   +  ++++FD   EK +ASWN +IAGY  +G  +E
Sbjct: 436 FALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLREKDVASWNVIIAGYGIHGRGKE 495

Query: 396 AISLFQEMQASKVAPNPVTVSSILSACAQLGAISLG-KWVHELVKSRNFESNIYVSTALI 454
           A+ LF++M    + P+  T + IL AC+  G +  G ++ ++++   N E  +   T ++
Sbjct: 496 ALELFEKMLRLGLKPDDFTFTGILMACSHAGLVEDGLEYFNQMLNLHNIEPKLEHYTCVV 555

Query: 455 DMYAKCGNIVEARELFDLMSHKSEV-TWNTMISGYGLHGHGLEALQLFSEMLH-SGIRPS 512
           DM  + G I +A  L + M    +   W++++S   +HG+     ++ +++L     +P 
Sbjct: 556 DMLGRAGRIDDALRLIEEMPGDPDSRIWSSLLSSCRIHGNLGLGEKVANKLLELEPEKPE 615

Query: 513 GVTFLSVLYACS 524
               +S L+A S
Sbjct: 616 NYVLISNLFAGS 627


>gi|225434622|ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Vitis vinifera]
          Length = 743

 Score =  488 bits (1256), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 267/711 (37%), Positives = 403/711 (56%), Gaps = 35/711 (4%)

Query: 109 FTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDL--YFKFSWVKSARKVF 166
           F     LS    C +      +H   + +G   D F  + L+       F  +  A++VF
Sbjct: 33  FANHPTLSLIDQCSETKQLKQIHAQMLRTGLFFDPFSASRLITAAALSPFPSLDYAQQVF 92

Query: 167 DKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQEL 226
           D++P  +   WN++I     +     S+ +F  M+     + D  +   ++ A +E++EL
Sbjct: 93  DQIPHPNLYTWNTLIRAYASSSNPHQSLLIFLRMLHQSPDFPDKFTFPFLIKAASELEEL 152

Query: 227 RLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGY 286
             G     + +K+     V++L  L+ FY+KCGE+     +F +I R D++S N+MI+ +
Sbjct: 153 FTGKAFHGMVIKVLLGSDVFILNSLIHFYAKCGELGLGYRVFVNIPRRDVVSWNSMITAF 212

Query: 287 TCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVF-----YPFGH--------------L 327
              G  E +L LF+++     + N  T+VG++        + FG               L
Sbjct: 213 VQGGCPEEALELFQEMETQNVKPNGITMVGVLSACAKKSDFEFGRWVHSYIERNRIGESL 272

Query: 328 HLTNCIHSFCLKSGIVSNSSVL------------TALSTVYSRLNEMEAARKLFDESSEK 375
            L+N +     K G V ++  L            T +   Y+++ E +AA+ +FD    +
Sbjct: 273 TLSNAMLDMYTKCGSVEDAKRLFDKMPEKDIVSWTTMLVGYAKIGEYDAAQGIFDAMPNQ 332

Query: 376 SLASWNAMIAGYTQNGLTEEAISLFQEMQASKVA-PNPVTVSSILSACAQLGAISLGKWV 434
            +A+WNA+I+ Y Q G  +EA+ LF E+Q SK A P+ VT+ S LSACAQLGA+ LG W+
Sbjct: 333 DIAAWNALISAYEQCGKPKEALELFHELQLSKTAKPDEVTLVSTLSACAQLGAMDLGGWI 392

Query: 435 HELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHG 494
           H  +K +  + N +++T+LIDMY KCG++ +A  +F  +  K    W+ MI+G  +HGHG
Sbjct: 393 HVYIKKQGMKLNCHLTTSLIDMYCKCGDLQKALMVFHSVERKDVFVWSAMIAGLAMHGHG 452

Query: 495 LEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYAC 554
            +A+ LFS+M    ++P+ VTF ++L ACSH GLV EG   F  M   +G  P  +HYAC
Sbjct: 453 KDAIALFSKMQEDKVKPNAVTFTNILCACSHVGLVEEGRTFFNQMELVYGVLPGVKHYAC 512

Query: 555 MVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPEN 614
           MVDILGRAG LE+A+E I+ + + P  +VWGALLGAC IH++  LA  A  +L EL+P N
Sbjct: 513 MVDILGRAGLLEEAVELIEKMPMAPAASVWGALLGACTIHENVVLAEQACSQLIELEPGN 572

Query: 615 VGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQS 674
            G +VLLSNIY+    + + + +R++++   L K PGC+ IEV G  H F  GD  HP +
Sbjct: 573 HGAYVLLSNIYAKAGKWDRVSGLRKLMRDVGLKKEPGCSSIEVDGIVHEFLVGDNSHPSA 632

Query: 675 TAIYAMLEKLNGKMREAGFQTETVTALHDVEEEE-KELMMKVHSEKLAIAFGLIATEPGT 733
             IYA L+++  ++   G+       L  VEEE+ KE  + +HSEKLAIAFGLI+T    
Sbjct: 633 KKIYAKLDEIVARLETIGYVPNKSHLLQLVEEEDVKEQALFLHSEKLAIAFGLISTGQSQ 692

Query: 734 EIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
            IRI+KNLRVC DCH+  K +SK+  R I++RD  RFHHF+ G CSC DYW
Sbjct: 693 PIRIVKNLRVCGDCHSVAKLVSKLYDREILLRDRYRFHHFREGHCSCMDYW 743



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 142/529 (26%), Positives = 254/529 (48%), Gaps = 37/529 (6%)

Query: 13  LSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKL--AHRLSDFKATCYARALFFSIPKP 70
           LSL+       QL Q HAQ++  G   D  + ++L  A  LS F +  YA+ +F  IP P
Sbjct: 39  LSLIDQCSETKQLKQIHAQMLRTGLFFDPFSASRLITAAALSPFPSLDYAQQVFDQIPHP 98

Query: 71  DLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLL 130
           +L+ +N +IR ++++  P  S+  +  +   +   PD FT+ F++ AAS   +   G   
Sbjct: 99  NLYTWNTLIRAYASSSNPHQSLLIFLRMLHQSPDFPDKFTFPFLIKAASELEELFTGKAF 158

Query: 131 HGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCF 190
           HG  I    GSD+F+  +L+  Y K   +    +VF  +P +D V WNSMI+  ++  C 
Sbjct: 159 HGMVIKVLLGSDVFILNSLIHFYAKCGELGLGYRVFVNIPRRDVVSWNSMITAFVQGGCP 218

Query: 191 QDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTG 250
           ++++ +F +M        +  ++  VL A A+  +   G  +     +    + + +   
Sbjct: 219 EEALELFQEM-ETQNVKPNGITMVGVLSACAKKSDFEFGRWVHSYIERNRIGESLTLSNA 277

Query: 251 LVSFYSKCGEVERAELLF-----RDIV--------------------------RPDLISC 279
           ++  Y+KCG VE A+ LF     +DIV                            D+ + 
Sbjct: 278 MLDMYTKCGSVEDAKRLFDKMPEKDIVSWTTMLVGYAKIGEYDAAQGIFDAMPNQDIAAW 337

Query: 280 NAMISGYTCNGKTESSLRLFRQL-LASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCL 338
           NA+IS Y   GK + +L LF +L L+   + +  T+V  +      G + L   IH +  
Sbjct: 338 NALISAYEQCGKPKEALELFHELQLSKTAKPDEVTLVSTLSACAQLGAMDLGGWIHVYIK 397

Query: 339 KSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAIS 398
           K G+  N  + T+L  +Y +  +++ A  +F     K +  W+AMIAG   +G  ++AI+
Sbjct: 398 KQGMKLNCHLTTSLIDMYCKCGDLQKALMVFHSVERKDVFVWSAMIAGLAMHGHGKDAIA 457

Query: 399 LFQEMQASKVAPNPVTVSSILSACAQLGAISLGK-WVHELVKSRNFESNIYVSTALIDMY 457
           LF +MQ  KV PN VT ++IL AC+ +G +  G+ + +++         +     ++D+ 
Sbjct: 458 LFSKMQEDKVKPNAVTFTNILCACSHVGLVEEGRTFFNQMELVYGVLPGVKHYACMVDIL 517

Query: 458 AKCGNIVEARELFDLMSHKSEVT-WNTMISGYGLHGHGLEALQLFSEML 505
            + G + EA EL + M      + W  ++    +H + + A Q  S+++
Sbjct: 518 GRAGLLEEAVELIEKMPMAPAASVWGALLGACTIHENVVLAEQACSQLI 566


>gi|356544848|ref|XP_003540859.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Glycine max]
          Length = 701

 Score =  488 bits (1256), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 260/659 (39%), Positives = 386/659 (58%), Gaps = 5/659 (0%)

Query: 130 LHGHAIVSG-YGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNC 188
           LH H    G    + ++   L   Y     +  A+ +FD++  K++ LWNSMI G   N 
Sbjct: 44  LHAHVTTGGTLRRNTYLATKLAACYAVCGHMPYAQHIFDQIVLKNSFLWNSMIRGYACNN 103

Query: 189 CFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVL 248
               +++++  M+  G    D+ +   VL A  ++    +G ++  L +  G  + VYV 
Sbjct: 104 SPSRALFLYLKMLHFGQK-PDNFTYPFVLKACGDLLLREMGRKVHALVVVGGLEEDVYVG 162

Query: 249 TGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAER 308
             ++S Y K G+VE A ++F  ++  DL S N M+SG+  NG+   +  +F  +      
Sbjct: 163 NSILSMYFKFGDVEAARVVFDRMLVRDLTSWNTMMSGFVKNGEARGAFEVFGDMRRDGFV 222

Query: 309 VNSSTIVGLIPVFYPFGHLHLTNCIHSFCLK---SGIVSNSSVLTALSTVYSRLNEMEAA 365
            + +T++ L+        L +   IH + ++   SG V N  ++ ++  +Y     +  A
Sbjct: 223 GDRTTLLALLSACGDVMDLKVGKEIHGYVVRNGESGRVCNGFLMNSIIDMYCNCESVSCA 282

Query: 366 RKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQL 425
           RKLF+    K + SWN++I+GY + G   +A+ LF  M      P+ VTV S+L+AC Q+
Sbjct: 283 RKLFEGLRVKDVVSWNSLISGYEKCGDAFQALELFGRMVVVGAVPDEVTVISVLAACNQI 342

Query: 426 GAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMI 485
            A+ LG  V   V  R +  N+ V TALI MYA CG++V A  +FD M  K+      M+
Sbjct: 343 SALRLGATVQSYVVKRGYVVNVVVGTALIGMYANCGSLVCACRVFDEMPEKNLPACTVMV 402

Query: 486 SGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGF 545
           +G+G+HG G EA+ +F EML  G+ P    F +VL ACSH+GLV EG EIF  M  D+  
Sbjct: 403 TGFGIHGRGREAISIFYEMLGKGVTPDEGIFTAVLSACSHSGLVDEGKEIFYKMTRDYSV 462

Query: 546 KPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASE 605
           +P   HY+C+VD+LGRAG L++A   I+ + ++P   VW ALL AC +H++  LA ++++
Sbjct: 463 EPRPTHYSCLVDLLGRAGYLDEAYAVIENMKLKPNEDVWTALLSACRLHRNVKLAVISAQ 522

Query: 606 KLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFT 665
           KLFEL+P+ V  +V LSNIY+AER +     VR +V KR+L K P  + +E+    H F 
Sbjct: 523 KLFELNPDGVSGYVCLSNIYAAERRWEDVENVRALVAKRRLRKPPSYSFVELNKMVHQFF 582

Query: 666 SGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFG 725
            GD  H QS  IYA L+ LN ++++AG++ +T   L+DVEEE KE M+  HSE+LA+AF 
Sbjct: 583 VGDTSHEQSDDIYAKLKDLNEQLKKAGYKPDTSLVLYDVEEEIKEKMLWDHSERLALAFA 642

Query: 726 LIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           LI T PGT IRI KNLRVC DCHT  K ISK+T R I++RD  RFHHF+ G+CSCG YW
Sbjct: 643 LINTGPGTTIRITKNLRVCGDCHTVIKMISKLTNREIIMRDICRFHHFRDGLCSCGGYW 701



 Score =  240 bits (612), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 168/538 (31%), Positives = 275/538 (51%), Gaps = 29/538 (5%)

Query: 6   PQSRNLFLSL--------LKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKAT 57
           P S + F SL        L  +K+ +Q  Q HA +   G    L   T LA +L+   A 
Sbjct: 14  PSSTSTFDSLQCGTLLQSLTNSKSLTQALQLHAHVTTGG---TLRRNTYLATKLAACYAV 70

Query: 58  C----YARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSF 113
           C    YA+ +F  I   + FL+N +IRG++ N  P  ++  Y  +  +    PDNFTY F
Sbjct: 71  CGHMPYAQHIFDQIVLKNSFLWNSMIRGYACNNSPSRALFLYLKML-HFGQKPDNFTYPF 129

Query: 114 VLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKD 173
           VL A      R +G  +H   +V G   D++VG +++ +YFKF  V++AR VFD+M  +D
Sbjct: 130 VLKACGDLLLREMGRKVHALVVVGGLEEDVYVGNSILSMYFKFGDVEAARVVFDRMLVRD 189

Query: 174 TVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQ 233
              WN+M+SG +KN   + +  VFGDM R+G    D T++ A+L A  +V +L++G EI 
Sbjct: 190 LTSWNTMMSGFVKNGEARGAFEVFGDMRRDGFVG-DRTTLLALLSACGDVMDLKVGKEIH 248

Query: 234 CLGLKLGFHDHV---YVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNG 290
              ++ G    V   +++  ++  Y  C  V  A  LF  +   D++S N++ISGY   G
Sbjct: 249 GYVVRNGESGRVCNGFLMNSIIDMYCNCESVSCARKLFEGLRVKDVVSWNSLISGYEKCG 308

Query: 291 KTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLT 350
               +L LF +++      +  T++ ++        L L   + S+ +K G V N  V T
Sbjct: 309 DAFQALELFGRMVVVGAVPDEVTVISVLAACNQISALRLGATVQSYVVKRGYVVNVVVGT 368

Query: 351 ALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAP 410
           AL  +Y+    +  A ++FDE  EK+L +   M+ G+  +G   EAIS+F EM    V P
Sbjct: 369 ALIGMYANCGSLVCACRVFDEMPEKNLPACTVMVTGFGIHGRGREAISIFYEMLGKGVTP 428

Query: 411 NPVTVSSILSACAQLGAISLGKWV-HELVKSRNFESNIYVSTALIDMYAKCGNIVEAREL 469
           +    +++LSAC+  G +  GK + +++ +  + E      + L+D+  + G + EA  +
Sbjct: 429 DEGIFTAVLSACSHSGLVDEGKEIFYKMTRDYSVEPRPTHYSCLVDLLGRAGYLDEAYAV 488

Query: 470 FDLMSHK-SEVTWNTMISGYGLHGH----GLEALQLFSEMLHSGIRPSGVTFLSVLYA 522
            + M  K +E  W  ++S   LH +     + A +LF E+   G+  SG   LS +YA
Sbjct: 489 IENMKLKPNEDVWTALLSACRLHRNVKLAVISAQKLF-ELNPDGV--SGYVCLSNIYA 543


>gi|449448586|ref|XP_004142047.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
            [Cucumis sativus]
          Length = 1037

 Score =  488 bits (1256), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 276/776 (35%), Positives = 438/776 (56%), Gaps = 6/776 (0%)

Query: 13   LSLLKGAKTQSQL----TQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIP 68
            LS +  A T+ QL     Q H  +I  GF ++      L    S  +    A  +F ++ 
Sbjct: 264  LSSVLSASTKIQLFELGEQLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMN 323

Query: 69   KPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGV 128
              D   +N +I G         ++  +T ++++  L PD  T + +LSA ++      G+
Sbjct: 324  SRDGVSYNSLISGLVQQGFSDRALELFTKMQRD-CLKPDCITVASLLSACASVGALHKGM 382

Query: 129  LLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNC 188
             LH HAI +G  +D+ +  +L+DLY K + V++A K F     ++ VLWN M+    +  
Sbjct: 383  QLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLTTETENIVLWNVMLVAYGQLD 442

Query: 189  CFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVL 248
               DS  +F  M +  G   +  +  ++L     +  L LG +I    +K GF  +VYV 
Sbjct: 443  NLSDSFEIFRQM-QMEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVC 501

Query: 249  TGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAER 308
            + L+  Y+K G++  A  + R +   D++S  AMI+GY  +     +L+LF ++     +
Sbjct: 502  SVLIDMYAKYGQLALALRILRRLPEDDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQ 561

Query: 309  VNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKL 368
             ++      I        L     IH+    +G  ++ S+  AL ++Y+R   ++ A   
Sbjct: 562  FDNIGFASAISACAGIRALRQGQQIHAQSYAAGFGADLSINNALISLYARCGRIQEAYLA 621

Query: 369  FDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAI 428
            F++  +K+  SWN++++G  Q+G  EEA+ +F  M  ++   N  T  S +SA A L  I
Sbjct: 622  FEKIGDKNNISWNSLVSGLAQSGYFEEALQVFVRMLRTEAEVNMFTYGSAISAAASLANI 681

Query: 429  SLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGY 488
              G+ +H +V    ++S   VS +LI +YAK G+I +A   F+ MS ++ ++WN MI+GY
Sbjct: 682  KQGQQIHSMVLKTGYDSEREVSNSLISLYAKSGSISDAWREFNDMSERNVISWNAMITGY 741

Query: 489  GLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPL 548
              HG G+EAL+LF EM   GI P+ VTF+ VL ACSH GLV+EG + F+SM   H   P 
Sbjct: 742  SQHGCGMEALRLFEEMKVCGIMPNHVTFVGVLSACSHIGLVKEGLDYFESMFKIHDLVPK 801

Query: 549  AEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLF 608
            +EHY C+VD+LGRAGQL++A+E+IK + +     +W  LL AC+IHK+  +   A+  L 
Sbjct: 802  SEHYVCVVDLLGRAGQLDRAMEYIKEMPIPADAMIWRTLLSACVIHKNIEIGERAAHHLL 861

Query: 609  ELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGD 668
            EL+PE+   +VL+SNIY+  R ++     R+++K R + K PG + IEV    H F +GD
Sbjct: 862  ELEPEDSATYVLISNIYAVSRQWIHRDWSRKLMKDRGVKKEPGRSWIEVKNAVHAFYAGD 921

Query: 669  QLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIA 728
            +LHP +  IY  +  LN +  E G+  ++ + L++ E+ +K+ +  VHSEKLAIAFGL++
Sbjct: 922  KLHPLTNQIYEYIGHLNRRTSEIGYVQDSFSLLNESEQGQKDPITHVHSEKLAIAFGLLS 981

Query: 729  TEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
                  IR++KNLRVC DCH   K++SK++ R I+VRDA+RFHHF GGVCSC D+W
Sbjct: 982  LGNNIPIRVMKNLRVCNDCHNWIKYVSKISNRSIIVRDAHRFHHFDGGVCSCKDFW 1037



 Score =  251 bits (640), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 167/564 (29%), Positives = 278/564 (49%), Gaps = 13/564 (2%)

Query: 12  FLSLLKGAKTQSQLTQT---HAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIP 68
           +L LL+G  T   L +T   H +I   GF  +   +  L            A  +F    
Sbjct: 61  YLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDNYFRHGDQHGAVKVFDENS 120

Query: 69  KPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGV 128
              +F +N +I  F   +      C +  +     +TP+ +T++ VL A   C    I  
Sbjct: 121 NRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAE-GITPNGYTFAGVLKA---CVGGDIAF 176

Query: 129 ----LLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGL 184
                +H      G+ S   V   L+DLY K  +++SA+KVF+ +  KD V W +MISGL
Sbjct: 177 NYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCICMKDIVTWVAMISGL 236

Query: 185 MKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDH 244
            +N   +++I +F DM      +     +++VL A  ++Q   LG ++ CL +K GFH  
Sbjct: 237 SQNGLEEEAILLFCDM-HASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLVIKWGFHSE 295

Query: 245 VYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLA 304
            YV  GLV+ YS+  ++  AE +F  +   D +S N++ISG    G ++ +L LF ++  
Sbjct: 296 TYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALELFTKMQR 355

Query: 305 SAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEA 364
              + +  T+  L+      G LH    +HS  +K+G+ ++  +  +L  +YS+  ++E 
Sbjct: 356 DCLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVET 415

Query: 365 ARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQ 424
           A K F  +  +++  WN M+  Y Q     ++  +F++MQ   + PN  T  SIL  C  
Sbjct: 416 AHKFFLTTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTS 475

Query: 425 LGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTM 484
           LGA+ LG+ +H  V    F+ N+YV + LIDMYAK G +  A  +   +     V+W  M
Sbjct: 476 LGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDVVSWTAM 535

Query: 485 ISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHG 544
           I+GY  H    EALQLF EM + GI+   + F S + AC+    +R+G +I  +  +  G
Sbjct: 536 IAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQI-HAQSYAAG 594

Query: 545 FKPLAEHYACMVDILGRAGQLEKA 568
           F         ++ +  R G++++A
Sbjct: 595 FGADLSINNALISLYARCGRIQEA 618



 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 106/368 (28%), Positives = 176/368 (47%), Gaps = 15/368 (4%)

Query: 230 MEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCN 289
           M + C   K GF     ++  LV  Y + G+   A  +F +     + S N MI  +   
Sbjct: 78  MRLHCRISKSGFDGEPLLIDSLVDNYFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQ 137

Query: 290 GKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFG-HLHLTNCIHSFCLKSGIVSNSSV 348
                   LFR++LA     N  T  G++          +    +HS     G  S+  V
Sbjct: 138 KSNFQVFCLFRRMLAEGITPNGYTFAGVLKACVGGDIAFNYVKQVHSRTFYYGFDSSPLV 197

Query: 349 LTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKV 408
              L  +YS+   +E+A+K+F+    K + +W AMI+G +QNGL EEAI LF +M AS++
Sbjct: 198 ANLLIDLYSKNGYIESAKKVFNCICMKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEI 257

Query: 409 APNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARE 468
            P P  +SS+LSA  ++    LG+ +H LV    F S  YV   L+ +Y++   ++ A  
Sbjct: 258 FPTPYVLSSVLSASTKIQLFELGEQLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAER 317

Query: 469 LFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGL 528
           +F  M+ +  V++N++ISG    G    AL+LF++M    ++P  +T  S+L AC+  G 
Sbjct: 318 IFSTMNSRDGVSYNSLISGLVQQGFSDRALELFTKMQRDCLKPDCITVASLLSACASVGA 377

Query: 529 VREGDEIFQSMIHDHGFKP------LAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPA 582
           + +G +     +H H  K       + E    ++D+  +   +E A +F      E    
Sbjct: 378 LHKGMQ-----LHSHAIKAGMSADIILE--GSLLDLYSKCADVETAHKFFLTTETE-NIV 429

Query: 583 VWGALLGA 590
           +W  +L A
Sbjct: 430 LWNVMLVA 437



 Score =  105 bits (263), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 84/265 (31%), Positives = 127/265 (47%), Gaps = 8/265 (3%)

Query: 308 RVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARK 367
           R N    + L+      G L  T  +H    KSG      ++ +L   Y R  +   A K
Sbjct: 55  RSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDNYFRHGDQHGAVK 114

Query: 368 LFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGA 427
           +FDE+S +S+ SWN MI  +       +   LF+ M A  + PN  T + +L AC   G 
Sbjct: 115 VFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTFAGVLKACVG-GD 173

Query: 428 ISLG--KWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMI 485
           I+    K VH       F+S+  V+  LID+Y+K G I  A+++F+ +  K  VTW  MI
Sbjct: 174 IAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCICMKDIVTWVAMI 233

Query: 486 SGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGF 545
           SG   +G   EA+ LF +M  S I P+     SVL A +   L   G+++   ++   GF
Sbjct: 234 SGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQL-HCLVIKWGF 292

Query: 546 KPLAEHYAC--MVDILGRAGQLEKA 568
              +E Y C  +V +  R+ +L  A
Sbjct: 293 H--SETYVCNGLVALYSRSRKLISA 315



 Score = 60.1 bits (144), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 46/174 (26%), Positives = 75/174 (43%), Gaps = 4/174 (2%)

Query: 397 ISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDM 456
           I L   M+   V  N      +L  C   G++     +H  +    F+    +  +L+D 
Sbjct: 43  IQLMNFMEERGVRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDN 102

Query: 457 YAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTF 516
           Y + G+   A ++FD  S++S  +WN MI  +       +   LF  ML  GI P+G TF
Sbjct: 103 YFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTF 162

Query: 517 LSVLYACSHAGLVREGDEIFQSMIHDHGFK--PLAEHYACMVDILGRAGQLEKA 568
             VL AC    +     +   S    +GF   PL  +   ++D+  + G +E A
Sbjct: 163 AGVLKACVGGDIAFNYVKQVHSRTFYYGFDSSPLVAN--LLIDLYSKNGYIESA 214


>gi|115463097|ref|NP_001055148.1| Os05g0305300 [Oryza sativa Japonica Group]
 gi|113578699|dbj|BAF17062.1| Os05g0305300 [Oryza sativa Japonica Group]
          Length = 852

 Score =  488 bits (1256), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 283/777 (36%), Positives = 427/777 (54%), Gaps = 63/777 (8%)

Query: 68  PKPDLFLFNVIIRGFSNNEMPKSSICFYTH-LRKNTALTPDNFTYSFVLSAASACCDRSI 126
           P P ++ +N++IR         S+I      LR  T L  D+FT   VL A         
Sbjct: 79  PSPAVW-WNLLIREHIKQGRLDSAINVSCRMLRAGTRL--DHFTLPHVLKACGELPSYRC 135

Query: 127 GVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEK---DTVLWNSMISG 183
           G   HG    +G+ S++F+  ALV +Y +   ++ A  +FD++ ++   D + WNS++S 
Sbjct: 136 GSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFDEITQRGIDDVISWNSIVSA 195

Query: 184 LMKNCCFQDSIWVFGDMV-----RNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLK 238
            +K+     ++ +F  M      +      D  S+  +LPA   ++ +    E+    ++
Sbjct: 196 HVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPACGSLKAVPQTKEVHGNAIR 255

Query: 239 LGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGK------- 291
            G    V+V   L+  Y+KCG +E A  +F  +   D++S NAM++GY+ +G        
Sbjct: 256 NGTFLDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFKAAFEL 315

Query: 292 ----------------------------TESSLRLFRQLLASAERVNSSTIVGLIPVFYP 323
                                       +  +L +FRQ++ S    N  TI+ ++     
Sbjct: 316 FKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALNVFRQMIFSGSLPNCVTIISVLSACAS 375

Query: 324 FGHLHLTNCIHSFCLKSGIVS----------NSSVLTALSTVYSRLNEMEAARKLFDES- 372
            G       IH++ LK+ +++          +  V  AL  +YS+    +AAR +FD+  
Sbjct: 376 LGAFSQGMEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIP 435

Query: 373 -SEKSLASWNAMIAGYTQNGLTEEAISLFQEM--QASKVAPNPVTVSSILSACAQLGAIS 429
             E+++ +W  MI G+ Q G + +A+ LF EM  +   VAPN  T+S IL ACA L AI 
Sbjct: 436 LEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIR 495

Query: 430 LGKWVHELV-KSRNFESNIY-VSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISG 487
           +GK +H  V +   ++S+ Y V+  LI+MY+KCG++  AR +FD MS KS ++W +M++G
Sbjct: 496 IGKQIHAYVLRHHQYDSSAYFVANCLINMYSKCGDVDTARHVFDSMSQKSAISWTSMMTG 555

Query: 488 YGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKP 547
           YG+HG G EAL +F +M  +G  P  +TFL VLYACSH G+V +G   F SM  D+G  P
Sbjct: 556 YGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTP 615

Query: 548 LAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKL 607
            AEHYA  +D+L R G+L+KA + +K + +EP   VW ALL AC +H +  LA  A  KL
Sbjct: 616 RAEHYAYAIDLLARFGRLDKAWKTVKDMPMEPTAVVWVALLSACRVHSNVELAEHALNKL 675

Query: 608 FELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSG 667
            E++ EN G + L+SNIY+    +   A +R ++KK  + K PGC+ ++       F  G
Sbjct: 676 VEMNAENDGSYTLISNIYATAGRWKDVARIRHLMKKSGIKKRPGCSWVQGQKGTASFFVG 735

Query: 668 DQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLI 727
           D+ HP S  IYA+LE L  +++  G+  ET  ALHDV+EEEK  ++  HSEKLA+A+GL+
Sbjct: 736 DRSHPLSPQIYALLESLIDRIKAMGYVPETNFALHDVDEEEKNNLLVEHSEKLALAYGLL 795

Query: 728 ATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
            T PG  IRI KNLRVC DCH+A  +ISK+    IVVRD +RFHHFK G CSCG YW
Sbjct: 796 TTFPGCPIRITKNLRVCGDCHSAFTYISKIVDHEIVVRDPSRFHHFKNGSCSCGGYW 852



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 147/538 (27%), Positives = 252/538 (46%), Gaps = 63/538 (11%)

Query: 145 VGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNG 204
           +G  +V  Y        A  V +++     V WN +I   +K      +I V   M+R  
Sbjct: 53  LGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLR-A 111

Query: 205 GTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERA 264
           GT LD  ++  VL A  E+   R G     L    GF  +V++   LV+ YS+CG +E A
Sbjct: 112 GTRLDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEA 171

Query: 265 ELLFRDIVR---PDLISCNAMISGYTCNGKTESSLRLFRQLL------ASAERVNSSTIV 315
            ++F +I +    D+IS N+++S +  +    ++L LF ++        + ER +  +IV
Sbjct: 172 SMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIV 231

Query: 316 GLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEK 375
            ++P       +  T  +H   +++G   +  V  AL   Y++   ME A K+F+    K
Sbjct: 232 NILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNMMEFK 291

Query: 376 SLASWNAM-----------------------------------IAGYTQNGLTEEAISLF 400
            + SWNAM                                   IAGY+Q G + EA+++F
Sbjct: 292 DVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALNVF 351

Query: 401 QEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHE-------LVKSRNF---ESNIYVS 450
           ++M  S   PN VT+ S+LSACA LGA S G  +H        L    +F   + ++ V 
Sbjct: 352 RQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDEDLMVY 411

Query: 451 TALIDMYAKCGNIVEARELFD--LMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHS- 507
            ALIDMY+KC +   AR +FD   +  ++ VTW  MI G+  +G   +AL+LF EM+   
Sbjct: 412 NALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEP 471

Query: 508 -GIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYA-CMVDILGRAGQL 565
            G+ P+  T   +L AC+H   +R G +I   ++  H +   A   A C++++  + G +
Sbjct: 472 YGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINMYSKCGDV 531

Query: 566 EKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFE--LDPENVGYHVLL 621
           + A      ++ +     W +++    +H   + A    +K+ +    P+++ + V+L
Sbjct: 532 DTARHVFDSMS-QKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVL 588



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 57/237 (24%), Positives = 115/237 (48%), Gaps = 10/237 (4%)

Query: 343 VSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQE 402
           +S  S+ T +   Y      + A  + +  +      WN +I  + + G  + AI++   
Sbjct: 48  ISPRSLGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCR 107

Query: 403 MQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGN 462
           M  +    +  T+  +L AC +L +   G   H L+    FESN+++  AL+ MY++CG+
Sbjct: 108 MLRAGTRLDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGS 167

Query: 463 IVEARELFDLMSHK---SEVTWNTMISGYGLHGHGLEALQLFSEM---LH---SGIRPSG 513
           + EA  +FD ++ +     ++WN+++S +    +   AL LFS+M   +H   +  R   
Sbjct: 168 LEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDI 227

Query: 514 VTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALE 570
           ++ +++L AC     V +  E+  + I +  F  +    A ++D   + G +E A++
Sbjct: 228 ISIVNILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNA-LIDAYAKCGLMENAVK 283



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 63/291 (21%), Positives = 123/291 (42%), Gaps = 9/291 (3%)

Query: 36  GFQNDLSTVTKLAHRLSDFKATCYARALFFSIP--KPDLFLFNVIIRGFSNNEMPKSSI- 92
           G   DL     L    S  ++   AR++F  IP  + ++  + V+I G +       ++ 
Sbjct: 403 GEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALK 462

Query: 93  CFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGY--GSDLFVGAALV 150
            F   + +   + P+ +T S +L A +      IG  +H + +       S  FV   L+
Sbjct: 463 LFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLI 522

Query: 151 DLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDS 210
           ++Y K   V +AR VFD M +K  + W SM++G   +    +++ +F D +R  G   D 
Sbjct: 523 NMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIF-DKMRKAGFVPDD 581

Query: 211 TSVAAVLPAVAEVQELRLGME-IQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFR 269
            +   VL A +    +  G+     +    G           +   ++ G +++A    +
Sbjct: 582 ITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYAYAIDLLARFGRLDKAWKTVK 641

Query: 270 DI-VRPDLISCNAMISGYTCNGKTESSLRLFRQLLA-SAERVNSSTIVGLI 318
           D+ + P  +   A++S    +   E +     +L+  +AE   S T++  I
Sbjct: 642 DMPMEPTAVVWVALLSACRVHSNVELAEHALNKLVEMNAENDGSYTLISNI 692



 Score = 40.0 bits (92), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 35/131 (26%), Positives = 54/131 (41%), Gaps = 1/131 (0%)

Query: 438 VKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEA 497
           + S  F S   + T ++  Y  CG    A  + + ++    V WN +I  +   G    A
Sbjct: 42  LPSEPFISPRSLGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSA 101

Query: 498 LQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVD 557
           + +   ML +G R    T   VL AC      R G   F  +I  +GF+        +V 
Sbjct: 102 INVSCRMLRAGTRLDHFTLPHVLKACGELPSYRCGSA-FHGLICCNGFESNVFICNALVA 160

Query: 558 ILGRAGQLEKA 568
           +  R G LE+A
Sbjct: 161 MYSRCGSLEEA 171


>gi|326509211|dbj|BAJ91522.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 878

 Score =  488 bits (1255), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 272/694 (39%), Positives = 393/694 (56%), Gaps = 36/694 (5%)

Query: 124 RSIGVLLHGHAIVSGY---GSDLFVGAALVDLYFKFSWVKSARKVFDKMPEK------DT 174
           R +G   H  A+  G+   G + F   AL+ +Y +   V  A+ +F            D 
Sbjct: 188 RRLGREAHAFALKRGFLDEGRERFPFNALLSMYARLGLVDDAQSLFRTTAAAFSPGGGDV 247

Query: 175 VLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQC 234
           V WN+MIS L++     +++ V  DMV + G   D  + A+ LPA + ++ L LG E+  
Sbjct: 248 VTWNTMISLLVQGGRCAEAVEVLYDMV-SLGVRPDGVTFASALPACSRLEMLALGREMHA 306

Query: 235 LGLK-LGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRP--DLISCNAMISGYTCNGK 291
           + LK      + +V + LV  Y+   +V  A  +F  +  P   L   NAMI GY   G 
Sbjct: 307 VVLKDADLAANSFVASALVDMYAGNEKVASARRVFDMVPEPSRQLGMWNAMICGYAQAGM 366

Query: 292 TESSLRLFRQLLASAERVNS-STIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLT 350
            E +L LF ++ A A    S +T+ G++P             +H + +K G+  N  V  
Sbjct: 367 DEEALELFSRMEAEAGCAPSETTMSGVLPACARSEGFAGKEAMHGYVVKRGMAGNRFVQN 426

Query: 351 ALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQ------ 404
           AL  +Y+RL EM+ AR++F     + + SWN +I G    G   EA  L  EMQ      
Sbjct: 427 ALMDMYARLGEMDVARRIFAMIDPRDVVSWNTLITGCVVQGHAAEAFQLVTEMQLPSPSP 486

Query: 405 ----------ASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALI 454
                     A +  PN +T+ ++L  CA L A + GK +H        ES+I V +AL+
Sbjct: 487 SSSSTTEEGEAHRCMPNNITLMTLLPGCAALAAPARGKEIHGYAVRHALESDIAVGSALV 546

Query: 455 DMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSG-IRPSG 513
           DMYAKCG +  +R +FD +  ++ +TWN +I  YG+HG G EA+ LF EM   G   P+ 
Sbjct: 547 DMYAKCGCLAASRAVFDRLPRRNVITWNVLIMAYGMHGLGDEAVALFDEMAAGGEATPNE 606

Query: 514 VTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIK 573
           VTF++ L ACSH+GLV  G E+F  M  DHG KP  + +AC+VD+LGRAG+L++A   I 
Sbjct: 607 VTFIAALAACSHSGLVDRGLELFHGMERDHGVKPTPDLHACVVDVLGRAGRLDEAYSIIT 666

Query: 574 GLAVEPGP---AVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERD 630
            +  EPG    + W +LLGAC +H++  L  VA+E+LFEL+P    ++VLL NIYSA   
Sbjct: 667 SM--EPGEQQVSAWSSLLGACRLHRNVELGEVAAERLFELEPGEASHYVLLCNIYSAAGM 724

Query: 631 YLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMRE 690
           + ++  VR  ++++ +AK PGC+ IE+ G  H F +G+  HP S  ++A ++ L  +MR 
Sbjct: 725 WDKSVAVRVRMRRQGVAKEPGCSWIELDGAIHRFMAGESSHPASAEVHAHMDALWERMRR 784

Query: 691 AGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTA 750
            G+  +T   LHDV+E+EK  M++ HSEKLAIAFGL+   PG  IR+ KNLRVC DCH A
Sbjct: 785 EGYAPDTSCVLHDVDEDEKAAMLRYHSEKLAIAFGLLRAPPGAAIRVAKNLRVCNDCHEA 844

Query: 751 TKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
            KF+SK+ GR IV+RD  RFHHF+ G CSCGDYW
Sbjct: 845 AKFMSKMVGRDIVLRDVRRFHHFRDGSCSCGDYW 878



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 125/427 (29%), Positives = 206/427 (48%), Gaps = 35/427 (8%)

Query: 172 KDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEV---QELRL 228
           +D V +NS+IS L     ++ ++    DM+  G   + S ++ +VL A + +      RL
Sbjct: 131 RDAVSYNSLISALCLFRQWERALDALRDMLAEGRHDVSSFTLVSVLLACSHLPGDDGRRL 190

Query: 229 GMEIQCLGLKLGFHD---HVYVLTGLVSFYSKCGEVERAELLFRDIVRP------DLISC 279
           G E     LK GF D     +    L+S Y++ G V+ A+ LFR           D+++ 
Sbjct: 191 GREAHAFALKRGFLDEGRERFPFNALLSMYARLGLVDDAQSLFRTTAAAFSPGGGDVVTW 250

Query: 280 NAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLK 339
           N MIS     G+   ++ +   +++   R +  T    +P       L L   +H+  LK
Sbjct: 251 NTMISLLVQGGRCAEAVEVLYDMVSLGVRPDGVTFASALPACSRLEMLALGREMHAVVLK 310

Query: 340 SG-IVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKS--LASWNAMIAGYTQNGLTEEA 396
              + +NS V +AL  +Y+   ++ +AR++FD   E S  L  WNAMI GY Q G+ EEA
Sbjct: 311 DADLAANSFVASALVDMYAGNEKVASARRVFDMVPEPSRQLGMWNAMICGYAQAGMDEEA 370

Query: 397 ISLFQEMQA-SKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALID 455
           + LF  M+A +  AP+  T+S +L ACA+    +  + +H  V  R    N +V  AL+D
Sbjct: 371 LELFSRMEAEAGCAPSETTMSGVLPACARSEGFAGKEAMHGYVVKRGMAGNRFVQNALMD 430

Query: 456 MYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEM----------- 504
           MYA+ G +  AR +F ++  +  V+WNT+I+G  + GH  EA QL +EM           
Sbjct: 431 MYARLGEMDVARRIFAMIDPRDVVSWNTLITGCVVQGHAAEAFQLVTEMQLPSPSPSSSS 490

Query: 505 ------LHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDI 558
                  H  + P+ +T +++L  C+       G EI    +  H  +      + +VD+
Sbjct: 491 TTEEGEAHRCM-PNNITLMTLLPGCAALAAPARGKEIHGYAVR-HALESDIAVGSALVDM 548

Query: 559 LGRAGQL 565
             + G L
Sbjct: 549 YAKCGCL 555



 Score = 66.2 bits (160), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 35/127 (27%), Positives = 66/127 (51%)

Query: 106 PDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKV 165
           P+N T   +L   +A    + G  +HG+A+     SD+ VG+ALVD+Y K   + ++R V
Sbjct: 502 PNNITLMTLLPGCAALAAPARGKEIHGYAVRHALESDIAVGSALVDMYAKCGCLAASRAV 561

Query: 166 FDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQE 225
           FD++P ++ + WN +I     +    +++ +F +M   G    +  +  A L A +    
Sbjct: 562 FDRLPRRNVITWNVLIMAYGMHGLGDEAVALFDEMAAGGEATPNEVTFIAALAACSHSGL 621

Query: 226 LRLGMEI 232
           +  G+E+
Sbjct: 622 VDRGLEL 628



 Score = 45.1 bits (105), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 34/177 (19%), Positives = 75/177 (42%), Gaps = 8/177 (4%)

Query: 12  FLSLLKGAKT---QSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIP 68
            ++LL G       ++  + H   + H  ++D++  + L    +       +RA+F  +P
Sbjct: 507 LMTLLPGCAALAAPARGKEIHGYAVRHALESDIAVGSALVDMYAKCGCLAASRAVFDRLP 566

Query: 69  KPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAA--SACCDRSI 126
           + ++  +NV+I  +  + +   ++  +  +      TP+  T+   L+A   S   DR +
Sbjct: 567 RRNVITWNVLIMAYGMHGLGDEAVALFDEMAAGGEATPNEVTFIAALAACSHSGLVDRGL 626

Query: 127 GVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMP--EKDTVLWNSMI 181
             L HG     G      + A +VD+  +   +  A  +   M   E+    W+S++
Sbjct: 627 -ELFHGMERDHGVKPTPDLHACVVDVLGRAGRLDEAYSIITSMEPGEQQVSAWSSLL 682


>gi|242092564|ref|XP_002436772.1| hypothetical protein SORBIDRAFT_10g008520 [Sorghum bicolor]
 gi|241914995|gb|EER88139.1| hypothetical protein SORBIDRAFT_10g008520 [Sorghum bicolor]
          Length = 825

 Score =  488 bits (1255), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 275/759 (36%), Positives = 418/759 (55%), Gaps = 4/759 (0%)

Query: 28  THAQIIIHG--FQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNN 85
            HA+++  G   Q D      L +  +       AR LF  +P+ ++  F  +++G++  
Sbjct: 69  VHARVVQRGGVAQLDTFCANVLLNLYAKLGPLAAARRLFDGMPERNMVSFVTLVQGYALR 128

Query: 86  EMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFV 145
              + +   +  L++      ++F  + +L    A     +   +H  A   G+  + FV
Sbjct: 129 GGFEEAAGLFRRLQRE-GHEVNHFVLTTILKVLVAMDAPGLTCCIHACACKLGHDRNAFV 187

Query: 146 GAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGG 205
           G++L+D Y     V  AR VFD +  KD V W +M+S   +N   +D++  F  M R  G
Sbjct: 188 GSSLIDAYSLCGAVSHARCVFDGIIWKDAVTWTAMVSCYSENDIPEDALNTFSKM-RMAG 246

Query: 206 TWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAE 265
              +   + +VL A   +    LG  I    +K       +V   L+  Y+KCG +E A 
Sbjct: 247 AKPNPFVLTSVLKAAVCLSSAVLGKGIHGCAVKTLCDTEPHVGGALLDMYAKCGYIEDAR 306

Query: 266 LLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFG 325
            +F  I   D+I  + +IS Y  + + E +  +F +++ S+   N  ++ G++       
Sbjct: 307 TVFEIIPHDDVILWSFLISRYAQSYQNEQAFEMFLRMMRSSVVPNEFSLSGVLQACANVA 366

Query: 326 HLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIA 385
            L L   IH+  +K G  S   V  AL  VY++   ME + ++F    + +  SWN +I 
Sbjct: 367 FLDLGQQIHNLVIKLGYESELFVGNALMDVYAKCRNMENSLEIFRSLRDANEVSWNTIIV 426

Query: 386 GYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFES 445
           GY Q+G  E+A+S+FQEM+A+ V    VT SS+L ACA   +I     +H L++   F +
Sbjct: 427 GYCQSGFAEDALSVFQEMRAAHVLSTQVTFSSVLRACANTASIKHTVQIHSLIEKSTFNN 486

Query: 446 NIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEML 505
           +  V  +LID YAKCG I +A ++F+ +     V+WN +ISGY LHG   +AL+LF+ M 
Sbjct: 487 DTIVCNSLIDTYAKCGCIRDALKVFESIIQCDVVSWNAIISGYALHGRATDALELFNRMN 546

Query: 506 HSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQL 565
            S  +P+ VTF+++L  C   GLV +G  +F SM  DH  KP  +HY C+V +LGRAG+L
Sbjct: 547 KSDTKPNDVTFVALLSVCGSTGLVNQGLSLFNSMTMDHRIKPSMDHYTCIVRLLGRAGRL 606

Query: 566 EKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIY 625
             AL+FI  +   P P VW ALL +C++HK+  L + ++EK+ E++P++   +VLLSN+Y
Sbjct: 607 NDALKFIGDIPSTPSPMVWRALLSSCVVHKNVALGKFSAEKVLEIEPQDETTYVLLSNMY 666

Query: 626 SAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLN 685
           +A     Q A +R+ ++   + K  G + +E+ G  H F+ G   HP    I AMLE LN
Sbjct: 667 AAAGILDQVALLRKSMRNIGVKKEVGLSWVEIKGEVHAFSVGSADHPDMRIINAMLEWLN 726

Query: 686 GKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCL 745
            K    G+  +    LHDV+EEEK  M+ VHSE+LA+A+GL  T PG  IRI+KNLR CL
Sbjct: 727 LKASREGYVPDINVVLHDVDEEEKARMLWVHSERLALAYGLSMTPPGHPIRIMKNLRSCL 786

Query: 746 DCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           DCHT  K ISK+  R IVVRD NRFHHF  G+CSCGDYW
Sbjct: 787 DCHTVFKVISKIVQREIVVRDINRFHHFDEGICSCGDYW 825


>gi|225435852|ref|XP_002265253.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Vitis vinifera]
          Length = 972

 Score =  488 bits (1255), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 297/898 (33%), Positives = 470/898 (52%), Gaps = 119/898 (13%)

Query: 1   MSMKTP-QSRNLFLSLLKGAKTQSQLT---QTHAQIIIHGFQNDLSTVTKLAHRLSDF-- 54
           M +  P +   ++ S+L+  +    L    Q HAQ++++G    +     L  RL +   
Sbjct: 80  MDLTNPDECIEIYASILQKCRKLYNLRLGFQVHAQLVVNG----VDVCEFLGSRLLEVYC 135

Query: 55  KATCY--ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYS 112
           +  C   AR +F  + + ++F +  I+  +      + +I  + +L  N  + PD+F + 
Sbjct: 136 QTGCVEDARRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLF-YLMVNEGVRPDHFVFP 194

Query: 113 FVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEK 172
            V  A S   +  +G  ++ + +  G+  +  V  +++D++ K   +  AR+ F+++  K
Sbjct: 195 KVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFK 254

Query: 173 -----------------------------------DTVLWNSMISGLMKNCCFQDSIWVF 197
                                              D V WN++ISG  ++  F+++   F
Sbjct: 255 DVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQVTWNAIISGYAQSGQFEEASKYF 314

Query: 198 GDM--------------------VRNG---------------GTWLDSTSVAAVLPAVAE 222
            +M                     +NG               G   +S ++A+ + A   
Sbjct: 315 LEMGGLKDFKPNVVSWTALIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSACTN 374

Query: 223 VQELRLGMEIQCLGLKLGFHD-HVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNA 281
           +  LR G EI    +K+   D  + V   LV +Y+KC  VE A   F  I + DL+S NA
Sbjct: 375 LSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNA 434

Query: 282 MISGYTCNGKTESSLRL-----------------------------------FRQLLASA 306
           M++GY   G  E ++ L                                   F+++ +  
Sbjct: 435 MLAGYALRGSHEEAIELLSEMKFQGIEPDIITWNGLVTGFTQYGDGKAALEFFQRMHSMG 494

Query: 307 ERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAAR 366
              N++TI G +       +L L   IH + L++ I  ++ V +AL ++YS  + +E A 
Sbjct: 495 MDPNTTTISGALAACGQVRNLKLGKEIHGYVLRNHIELSTGVGSALISMYSGCDSLEVAC 554

Query: 367 KLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLG 426
            +F E S + +  WN++I+   Q+G +  A+ L +EM  S V  N VT+ S L AC++L 
Sbjct: 555 SVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLA 614

Query: 427 AISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMIS 486
           A+  GK +H+ +     ++  ++  +LIDMY +CG+I ++R +FDLM  +  V+WN MIS
Sbjct: 615 ALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMIS 674

Query: 487 GYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFK 546
            YG+HG G++A+ LF +    G++P+ +TF ++L ACSH+GL+ EG + F+ M  ++   
Sbjct: 675 VYGMHGFGMDAVNLFQQFRTMGLKPNHITFTNLLSACSHSGLIEEGWKYFKMMKTEYAMD 734

Query: 547 PLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEK 606
           P  E YACMVD+L RAGQ  + LEFI+ +  EP  AVWG+LLGAC IH + +LA  A+  
Sbjct: 735 PAVEQYACMVDLLSRAGQFNETLEFIEKMPFEPNAAVWGSLLGACRIHCNPDLAEYAARY 794

Query: 607 LFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTS 666
           LFEL+P++ G +VL++NIYSA   +  AA +R ++K+R + K PGC+ IEV    H F  
Sbjct: 795 LFELEPQSSGNYVLMANIYSAAGRWEDAAKIRCLMKERGVTKPPGCSWIEVKRKLHSFVV 854

Query: 667 GDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGL 726
           GD  HP    I A +E L   ++E G+  +T   L DV+E+EKE  +  HSEK+A+AFGL
Sbjct: 855 GDTSHPLMEQISAKMESLYFDIKEIGYVPDTNFVLQDVDEDEKEFSLCGHSEKIALAFGL 914

Query: 727 IATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           I+T  GT +RIIKNLRVC DCH+ATKFISKV  R I++RD  RFHHF  GVCSCGDYW
Sbjct: 915 ISTTAGTPLRIIKNLRVCGDCHSATKFISKVEKRDIIMRDNYRFHHFVDGVCSCGDYW 972


>gi|302773622|ref|XP_002970228.1| hypothetical protein SELMODRAFT_93321 [Selaginella moellendorffii]
 gi|300161744|gb|EFJ28358.1| hypothetical protein SELMODRAFT_93321 [Selaginella moellendorffii]
          Length = 936

 Score =  487 bits (1254), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 265/733 (36%), Positives = 414/733 (56%), Gaps = 18/733 (2%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           AR +F  +P   +  +N +I  +S +E    +   +  +++      D  T+   LS   
Sbjct: 214 ARKVFDGMPCRSVGTWNSMISAYSISERSGEAFFIFQRMQQEGERC-DRVTF---LSILD 269

Query: 120 ACCDRSIGVLLHGHAIV-----SGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDT 174
           AC +     L HG  +      + +  DLFVG AL+ +Y +    + A +VF +M + + 
Sbjct: 270 ACVNPE--TLQHGKHVRESISETSFELDLFVGTALITMYARCRSPEDAAQVFGRMKQTNL 327

Query: 175 VLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQC 234
           + W+++I+    +    +++  F  M++  G   +  +  ++L        L     I  
Sbjct: 328 ITWSAIITAFADHGHCGEALRYF-RMMQQEGILPNRVTFISLLNGFTTPSGLEELSRIHL 386

Query: 235 LGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTES 294
           L  + G  D   +   LV+ Y +C   + A  +F  +  P+LIS N+MI  Y    + + 
Sbjct: 387 LITEHGLDDTTTMRNALVNVYGRCESPDDARTVFDQLELPNLISWNSMIGIYVQCERHDD 446

Query: 295 SLRLFRQLLASA---ERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTA 351
           +L+LFR +       +RVN  TI+G   +     H      +H    +SG+  +  V T+
Sbjct: 447 ALQLFRTMQQQGIQPDRVNFMTILGACTIG---SHGRTRKLVHQCVEESGLGGSPLVQTS 503

Query: 352 LSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPN 411
           L  +Y++  E++ A  +  E  E+ + +WN +I GY  +G + EA+  +Q++Q   +  +
Sbjct: 504 LVNMYAKAGELDVAEVILQEMDEQQITAWNVLINGYALHGRSREALEAYQKLQLEAIPVD 563

Query: 412 PVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFD 471
            VT  S+L+AC    +++ GK +H        +S++ V  AL +MY+KCG++  AR +FD
Sbjct: 564 KVTFISVLNACTSSTSLAEGKMIHSNAVECGLDSDVIVKNALTNMYSKCGSMENARRIFD 623

Query: 472 LMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVRE 531
            M  +S V+WN M+  Y  HG   E L+L  +M   G++ +G+TF+SVL +CSHAGL+ E
Sbjct: 624 SMPIRSAVSWNGMLQAYAQHGESEEVLKLIRKMEQEGVKLNGITFVSVLSSCSHAGLIAE 683

Query: 532 GDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGAC 591
           G + F S+ HD G +   EHY C+VD+LGRAG+L++A ++I  + +EPG   W +LLGAC
Sbjct: 684 GCQYFHSLGHDRGIEVKTEHYGCLVDLLGRAGKLQEAEKYISKMPLEPGIVTWASLLGAC 743

Query: 592 MIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPG 651
            + KD +  ++A+ KL ELDP N    V+LSNIYS   D+  AA +R+ +  R++ K PG
Sbjct: 744 RVQKDLDRGKLAAGKLLELDPGNSSASVVLSNIYSERGDWKNAAKLRRAMASRRVKKVPG 803

Query: 652 CTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKEL 711
            + I+V    H F   D  HP++  IY  +E+L   MREAG+  +T   LHDV+EE+KE 
Sbjct: 804 ISSIQVKNKVHEFRVRDTSHPRAAEIYDKVEELCFAMREAGYVPDTKMVLHDVDEEQKES 863

Query: 712 MMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFH 771
           ++  HSEKLAIAFGLI+T   + + I KNLRVC DCHTATKFISK+TGR IVVRD +RFH
Sbjct: 864 LLAYHSEKLAIAFGLISTPETSSLHIFKNLRVCEDCHTATKFISKITGREIVVRDNHRFH 923

Query: 772 HFKGGVCSCGDYW 784
           HF+ G CSC DYW
Sbjct: 924 HFRDGSCSCKDYW 936



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 149/523 (28%), Positives = 252/523 (48%), Gaps = 28/523 (5%)

Query: 152 LYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDST 211
           +Y +   +  A   F K+  ++ V WN MIS       FQ+++ +F  M+  G    ++ 
Sbjct: 1   MYSRCGSLGDAVAAFGKIRARNVVSWNVMISAYSSYKSFQEALALFHAMLLEG-VAPNAI 59

Query: 212 SVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDI 271
           ++ AVL +    +ELR G+ +  L L+ GF  +  V T L++ Y KCG +  A+ +F ++
Sbjct: 60  TLVAVLNSCGSFRELRDGILVHALSLERGFFQNTLVATALLNMYGKCGTLLDAQSVFEEM 119

Query: 272 VRPDLISCNAMISGYTCNGKT-ESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLT 330
              ++++ NAM+  Y+  G   + ++ LF ++L    + N  T + ++        L   
Sbjct: 120 AEKNVVTWNAMLGVYSLQGCCWKLAVELFTRMLLEGVKANVITFLNVLNSVVDPDALRKG 179

Query: 331 NCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQN 390
             IHS   +S    +  V TAL   Y++   +  ARK+FD    +S+ +WN+MI+ Y+ +
Sbjct: 180 KFIHSCVRESEHSLDVFVNTALVNTYTKCGSLTDARKVFDGMPCRSVGTWNSMISAYSIS 239

Query: 391 GLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVS 450
             + EA  +FQ MQ      + VT  SIL AC     +  GK V E +   +FE +++V 
Sbjct: 240 ERSGEAFFIFQRMQQEGERCDRVTFLSILDACVNPETLQHGKHVRESISETSFELDLFVG 299

Query: 451 TALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIR 510
           TALI MYA+C +  +A ++F  M   + +TW+ +I+ +  HGH  EAL+ F  M   GI 
Sbjct: 300 TALITMYARCRSPEDAAQVFGRMKQTNLITWSAIITAFADHGHCGEALRYFRMMQQEGIL 359

Query: 511 PSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALE 570
           P+ VTF+S+L   +    + E   I   +I +HG          +V++ GR    + A  
Sbjct: 360 PNRVTFISLLNGFTTPSGLEELSRI-HLLITEHGLDDTTTMRNALVNVYGRCESPDDART 418

Query: 571 FIKGLAVEPGPAVWGALLG---ACMIHKDT-NLARVASEKLFELDPENVGYHVLLSNIYS 626
               L + P    W +++G    C  H D   L R   ++   + P+ V +  +L     
Sbjct: 419 VFDQLEL-PNLISWNSMIGIYVQCERHDDALQLFRTMQQQ--GIQPDRVNFMTILG---- 471

Query: 627 AERDYLQAATVRQVVKKRKLAKAPGCTLIE---VGGTPHVFTS 666
                  A T+    + RKL        +E   +GG+P V TS
Sbjct: 472 -------ACTIGSHGRTRKLVH----QCVEESGLGGSPLVQTS 503



 Score =  187 bits (476), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 145/561 (25%), Positives = 269/561 (47%), Gaps = 29/561 (5%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           A A F  I   ++  +NV+I  +S+ +  + ++  + H      + P+  T   VL++  
Sbjct: 11  AVAAFGKIRARNVVSWNVMISAYSSYKSFQEALALF-HAMLLEGVAPNAITLVAVLNSCG 69

Query: 120 ACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNS 179
           +  +   G+L+H  ++  G+  +  V  AL+++Y K   +  A+ VF++M EK+ V WN+
Sbjct: 70  SFRELRDGILVHALSLERGFFQNTLVATALLNMYGKCGTLLDAQSVFEEMAEKNVVTWNA 129

Query: 180 MISGL-MKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLK 238
           M+    ++ CC++ ++ +F  M+   G   +  +   VL +V +   LR G  I     +
Sbjct: 130 MLGVYSLQGCCWKLAVELFTRMLLE-GVKANVITFLNVLNSVVDPDALRKGKFIHSCVRE 188

Query: 239 LGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRL 298
                 V+V T LV+ Y+KCG +  A  +F  +    + + N+MIS Y+ + ++  +  +
Sbjct: 189 SEHSLDVFVNTALVNTYTKCGSLTDARKVFDGMPCRSVGTWNSMISAYSISERSGEAFFI 248

Query: 299 FRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSG-----IVSNSS------ 347
           F+++    ER +  T + +           L  C++   L+ G      +S +S      
Sbjct: 249 FQRMQQEGERCDRVTFLSI-----------LDACVNPETLQHGKHVRESISETSFELDLF 297

Query: 348 VLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASK 407
           V TAL T+Y+R    E A ++F    + +L +W+A+I  +  +G   EA+  F+ MQ   
Sbjct: 298 VGTALITMYARCRSPEDAAQVFGRMKQTNLITWSAIITAFADHGHCGEALRYFRMMQQEG 357

Query: 408 VAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEAR 467
           + PN VT  S+L+       +     +H L+     +    +  AL+++Y +C +  +AR
Sbjct: 358 ILPNRVTFISLLNGFTTPSGLEELSRIHLLITEHGLDDTTTMRNALVNVYGRCESPDDAR 417

Query: 468 ELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAG 527
            +FD +   + ++WN+MI  Y       +ALQLF  M   GI+P  V F+++L AC+   
Sbjct: 418 TVFDQLELPNLISWNSMIGIYVQCERHDDALQLFRTMQQQGIQPDRVNFMTILGACTIGS 477

Query: 528 LVREGDEIFQSMIHDH-GFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGA 586
             R    + Q +     G  PL +    +V++  +AG+L+ A E I     E     W  
Sbjct: 478 HGRTRKLVHQCVEESGLGGSPLVQ--TSLVNMYAKAGELDVA-EVILQEMDEQQITAWNV 534

Query: 587 LLGACMIHKDTNLARVASEKL 607
           L+    +H  +  A  A +KL
Sbjct: 535 LINGYALHGRSREALEAYQKL 555



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 87/385 (22%), Positives = 163/385 (42%), Gaps = 9/385 (2%)

Query: 8   SRNLFLSLLKGAKTQS---QLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALF 64
           +R  F+SLL G  T S   +L++ H  I  HG  +  +    L +     ++   AR +F
Sbjct: 361 NRVTFISLLNGFTTPSGLEELSRIHLLITEHGLDDTTTMRNALVNVYGRCESPDDARTVF 420

Query: 65  FSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDR 124
             +  P+L  +N +I  +   E    ++  +  +++   + PD   +  +L A +     
Sbjct: 421 DQLELPNLISWNSMIGIYVQCERHDDALQLFRTMQQQ-GIQPDRVNFMTILGACTIGSHG 479

Query: 125 SIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGL 184
               L+H     SG G    V  +LV++Y K   +  A  +  +M E+    WN +I+G 
Sbjct: 480 RTRKLVHQCVEESGLGGSPLVQTSLVNMYAKAGELDVAEVILQEMDEQQITAWNVLINGY 539

Query: 185 MKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDH 244
             +   ++++  +  + +     +D  +  +VL A      L  G  I    ++ G    
Sbjct: 540 ALHGRSREALEAYQKL-QLEAIPVDKVTFISVLNACTSSTSLAEGKMIHSNAVECGLDSD 598

Query: 245 VYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLA 304
           V V   L + YSKCG +E A  +F  +     +S N M+  Y  +G++E  L+L R++  
Sbjct: 599 VIVKNALTNMYSKCGSMENARRIFDSMPIRSAVSWNGMLQAYAQHGESEEVLKLIRKMEQ 658

Query: 305 SAERVNSSTIVGLIPVFYPFGHLHLTNC--IHSFCLKSGIVSNSSVLTALSTVYSRLNEM 362
              ++N  T V ++      G L    C   HS     GI   +     L  +  R  ++
Sbjct: 659 EGVKLNGITFVSVLSSCSHAG-LIAEGCQYFHSLGHDRGIEVKTEHYGCLVDLLGRAGKL 717

Query: 363 EAARKLFDESS-EKSLASWNAMIAG 386
           + A K   +   E  + +W +++  
Sbjct: 718 QEAEKYISKMPLEPGIVTWASLLGA 742


>gi|296087599|emb|CBI34855.3| unnamed protein product [Vitis vinifera]
          Length = 956

 Score =  487 bits (1254), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 282/825 (34%), Positives = 440/825 (53%), Gaps = 91/825 (11%)

Query: 11  LFLSLLKGAKTQSQLTQTHA----QIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFS 66
           L+ S++ G +  +   +  A     +++  F  DL  V  L +  +       A  LF  
Sbjct: 172 LWTSMVTGYQQNNDPEEALALFSQMVMMDCFDGDLPLVNSLLNLYAKTGCEKIAANLFSK 231

Query: 67  IPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACC-DRS 125
           +P+ D+  ++ +I  ++NNE    ++  + H        P++ T   V+SA  AC   R+
Sbjct: 232 MPEKDVISWSTMIACYANNEAANEALNLF-HEMIEKRFEPNSVT---VVSALQACAVSRN 287

Query: 126 IGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLM 185
           +                                 +  +K+      KD V W +++SG  
Sbjct: 288 L---------------------------------EEGKKIHKIAVWKDVVSWVALLSGYA 314

Query: 186 KNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHV 245
           +N     S+ VF +M+ +G    D+ +V  +L A +E+   +  + +    ++ GF+ +V
Sbjct: 315 QNGMAYKSMGVFRNMLSDG-IQPDAVAVVKILAASSELGIFQQALCLHGYVVRSGFNSNV 373

Query: 246 YVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLAS 305
           +V   L+  YSKCG +  A  LF+ ++  D++  ++MI+ Y  +G+   +L +F Q++  
Sbjct: 374 FVGASLIELYSKCGSLGDAVKLFKGMIVRDVVIWSSMIAAYGIHGRGGEALEIFDQMIQV 433

Query: 306 AERVNSSTIVGLIPVFYPFGHLHLTNC---------IHSFCLKS---------------- 340
            + + S   + + P   P   L +T+C         + +F +++                
Sbjct: 434 MQGITSCYQISMQPQVQP--PLAITSCTLATHIPWKVKAFYMRAHFRWLGHFWEIFPTYP 491

Query: 341 --------------GIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAG 386
                         G+  +S +LT  + +Y   N ++AA  +F++        WN MI G
Sbjct: 492 FQAADMSKSNIFAYGLQYDSRILTKFAIMYVSFNRIDAASIVFEDIPNPCSFLWNVMIRG 551

Query: 387 YTQNGLTEEAISLFQEMQA-------SKVAPNPVTVSSILSACAQLGAISLGKWVHELVK 439
           +  +G    ++ L+ +M         S V PN V++ S+L AC  LGA+  G+W H  V 
Sbjct: 552 FATDGRFLSSLELYSKMMEKGLKPDNSGVIPNRVSILSVLLACGNLGALRKGEWFHSYVI 611

Query: 440 SRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQ 499
              FE +I V+TA++DMY+KCG++  AR LFD  + K  V W+ MI+ YG+HGHG +A+ 
Sbjct: 612 QTGFEFDILVATAIMDMYSKCGSLDLARCLFDETAGKDLVCWSAMIASYGIHGHGRKAID 671

Query: 500 LFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDIL 559
           LF +M+ +G+RPS VTF  VL ACSH+GL+ EG   FQ M  +        +YACMVD+L
Sbjct: 672 LFDQMVKAGVRPSHVTFTCVLSACSHSGLLEEGKMYFQLMTEEFVIARKLSNYACMVDLL 731

Query: 560 GRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHV 619
           GRAGQL +A++ I+ + VEP  ++WG+LLGAC IH + +LA   ++ LF LDP + GYHV
Sbjct: 732 GRAGQLSEAVDLIENMPVEPDASIWGSLLGACRIHNNLDLAEKIADHLFHLDPVHAGYHV 791

Query: 620 LLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYA 679
           LLSNIY+A+  + +   VR+++ +R   K  G +L+E     H F  GD+ HPQ   +YA
Sbjct: 792 LLSNIYAAKSRWNEVEKVRKMMARRGANKIQGFSLVEYDNQVHKFGVGDRSHPQWEKLYA 851

Query: 680 MLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIK 739
            LE+L   M+  G+   T   LHD+EEE KE  +  HSE+LAIAFGLI T PGT +RI K
Sbjct: 852 KLEELAAPMKHLGYVPLTDFVLHDIEEEAKEAALSYHSERLAIAFGLINTSPGTTLRITK 911

Query: 740 NLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           NLR+C DCH A K ISK+  RVI+VRD +RFH F+ GVCSCGDYW
Sbjct: 912 NLRICGDCHNAIKLISKIVNRVILVRDMHRFHRFEDGVCSCGDYW 956



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 166/666 (24%), Positives = 293/666 (43%), Gaps = 82/666 (12%)

Query: 7   QSRNLFLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFS 66
           +SR + + L +       ++Q H+Q+   G  +D    TKL    +   +   AR +F  
Sbjct: 2   RSRQVLVDLFQACNNGRSVSQLHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVFDE 61

Query: 67  IPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSI 126
            P P++ L+N  +R +   +  + ++  +  +       PDNFT    L A +      +
Sbjct: 62  TPHPNVHLWNSTLRSYCREKQWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLEL 121

Query: 127 GVLLHGHAIVSG-YGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLM 185
           G ++HG A  +   GSD+FVG+ALV+LY K   +  A KVF++    DTVLW SM++G  
Sbjct: 122 GKVIHGFAKKNDEIGSDMFVGSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQ 181

Query: 186 KNCCFQDSIWVFGDMVR----NGGTWLDSTSV------------AAVLPAVAEVQELRLG 229
           +N   ++++ +F  MV     +G   L ++ +            A +   + E   +   
Sbjct: 182 QNNDPEEALALFSQMVMMDCFDGDLPLVNSLLNLYAKTGCEKIAANLFSKMPEKDVISWS 241

Query: 230 MEIQCL--------GLKLGFHDHVYVL-----TGLVSFYSKCG---EVERAELLFRDIVR 273
             I C          L L FH+ +          +VS    C     +E  + + +  V 
Sbjct: 242 TMIACYANNEAANEALNL-FHEMIEKRFEPNSVTVVSALQACAVSRNLEEGKKIHKIAVW 300

Query: 274 PDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCI 333
            D++S  A++SGY  NG    S+ +FR +L+   + ++  +V ++      G      C+
Sbjct: 301 KDVVSWVALLSGYAQNGMAYKSMGVFRNMLSDGIQPDAVAVVKILAASSELGIFQQALCL 360

Query: 334 HSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLT 393
           H + ++SG  SN  V  +L  +YS+   +  A KLF     + +  W++MIA Y  +G  
Sbjct: 361 HGYVVRSGFNSNVFVGASLIELYSKCGSLGDAVKLFKGMIVRDVVIWSSMIAAYGIHGRG 420

Query: 394 EEAISLFQEM--------------QASKVAPNPVTVSSILSACA---QLGAISLG---KW 433
            EA+ +F +M                 +V P P+ ++S   A     ++ A  +    +W
Sbjct: 421 GEALEIFDQMIQVMQGITSCYQISMQPQVQP-PLAITSCTLATHIPWKVKAFYMRAHFRW 479

Query: 434 V---HELVKSRNFE------SNIY---------VSTALIDMYAKCGNIVEARELFDLMSH 475
           +    E+  +  F+      SNI+         + T    MY     I  A  +F+ + +
Sbjct: 480 LGHFWEIFPTYPFQAADMSKSNIFAYGLQYDSRILTKFAIMYVSFNRIDAASIVFEDIPN 539

Query: 476 KSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSG-------VTFLSVLYACSHAGL 528
                WN MI G+   G  L +L+L+S+M+  G++P         V+ LSVL AC + G 
Sbjct: 540 PCSFLWNVMIRGFATDGRFLSSLELYSKMMEKGLKPDNSGVIPNRVSILSVLLACGNLGA 599

Query: 529 VREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALL 588
           +R+G E F S +   GF+        ++D+  + G L+ A       A +     W A++
Sbjct: 600 LRKG-EWFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLARCLFDETAGK-DLVCWSAMI 657

Query: 589 GACMIH 594
            +  IH
Sbjct: 658 ASYGIH 663


>gi|297809863|ref|XP_002872815.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297318652|gb|EFH49074.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 776

 Score =  487 bits (1254), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 264/738 (35%), Positives = 404/738 (54%), Gaps = 83/738 (11%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNE-----------MPKSSICFYTHLRKNTALTPDN 108
           AR LF  +P+ DL  +NV+I+G+  N            MP+  +C +             
Sbjct: 109 ARMLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFERMPERDVCSW------------- 155

Query: 109 FTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDK 168
                                   + I+SGY  +                V  AR+VFD+
Sbjct: 156 ------------------------NTILSGYAQN--------------GCVDDARRVFDR 177

Query: 169 MPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGG--TWLDSTSVAAVLPAVAEVQEL 226
           MPEK+ V WN+++S  ++N   +++  +FG    N    +W            + E ++ 
Sbjct: 178 MPEKNDVSWNALLSAYVQNSKLEEACVLFGSR-ENWALVSWNCLLGGFVKKKKIVEARQF 236

Query: 227 RLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGY 286
              M+++           V     +++ Y++ GE++ A  LF +    D+ +  AM+SGY
Sbjct: 237 FDSMKVR----------DVVSWNTIITGYAQNGEIDEARQLFDESPVHDVFTWTAMVSGY 286

Query: 287 TCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNS 346
             N   E +  LF ++    E   ++ + G +          L + +           N 
Sbjct: 287 IQNRMVEEARELFDRMPERNEVSWNAMLAGYVQGERVEMAKELFDVMP--------CRNV 338

Query: 347 SVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQAS 406
           S    + T Y++  ++  A+ LFD+  ++   SW AMIAGY+Q+G + EA+ LF  M+  
Sbjct: 339 STWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSYEALRLFVLMERE 398

Query: 407 KVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEA 466
               N  + SS LS CA + A+ LGK +H  +    +E+  +V  AL+ MY KCG+I EA
Sbjct: 399 GGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEA 458

Query: 467 RELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHA 526
            +LF  M+ K  V+WNTMI+GY  HG G EAL+ F  M   G++P   T ++VL ACSH 
Sbjct: 459 NDLFKEMAGKDIVSWNTMIAGYSRHGFGEEALRFFESMKREGLKPDDATMVAVLSACSHT 518

Query: 527 GLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGA 586
           GLV +G + F +M  D+G +P ++HYACMVD+LGRAG LE+A   +K +  EP  A+WG 
Sbjct: 519 GLVDKGRQYFHTMTQDYGVRPNSQHYACMVDLLGRAGLLEEAHNLMKNMPFEPDAAIWGT 578

Query: 587 LLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKL 646
           LLGA  +H +T LA  A++K+F ++PEN G +VLLSN+Y++   +     +R  ++ + +
Sbjct: 579 LLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGV 638

Query: 647 AKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEE 706
            K PG + IE+    H F+ GD+ HP+   I+A LE L+ +M++AG+ ++T   LHDVEE
Sbjct: 639 KKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEDLDLRMKKAGYVSKTSVVLHDVEE 698

Query: 707 EEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRD 766
           EEKE M++ HSE+LA+A+G++    G  IR+IKNLRVC DCH A K+++KVTGR+I++RD
Sbjct: 699 EEKERMVRYHSERLAVAYGIMRVSSGRPIRVIKNLRVCEDCHNAIKYMAKVTGRLIILRD 758

Query: 767 ANRFHHFKGGVCSCGDYW 784
            NRFHHFK G CSCGDYW
Sbjct: 759 NNRFHHFKDGSCSCGDYW 776



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 115/430 (26%), Positives = 178/430 (41%), Gaps = 95/430 (22%)

Query: 249 TGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQL------ 302
             ++S Y + GE E A +LF ++   DL+S N MI GY  N     +  LF ++      
Sbjct: 94  NAMISGYLRNGEFELARMLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFERMPERDVC 153

Query: 303 --------------LASAERV-------NSSTIVGLIPVFYP----------FGHLHLTN 331
                         +  A RV       N  +   L+  +            FG      
Sbjct: 154 SWNTILSGYAQNGCVDDARRVFDRMPEKNDVSWNALLSAYVQNSKLEEACVLFGSRENWA 213

Query: 332 CIHSFCLKSGIVSNSSVLTA-----------------LSTVYSRLNEMEAARKLFDESSE 374
            +   CL  G V    ++ A                 + T Y++  E++ AR+LFDES  
Sbjct: 214 LVSWNCLLGGFVKKKKIVEARQFFDSMKVRDVVSWNTIITGYAQNGEIDEARQLFDESPV 273

Query: 375 KSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWV 434
             + +W AM++GY QN + EEA  LF  M       N V+ +++L+   Q   + + K +
Sbjct: 274 HDVFTWTAMVSGYIQNRMVEEARELFDRMPER----NEVSWNAMLAGYVQGERVEMAKEL 329

Query: 435 HELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHG 494
            +++  R    N+     +I  YA+CG I EA+ LFD M  +  V+W  MI+GY   GH 
Sbjct: 330 FDVMPCR----NVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHS 385

Query: 495 LEALQLFSEMLHSGIRPSGVTFLSVLYACS-----------HAGLVREGDE----IFQSM 539
            EAL+LF  M   G R +  +F S L  C+           H  LV+ G E    +  ++
Sbjct: 386 YEALRLFVLMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNAL 445

Query: 540 I-----------HDHGFKPLAEH----YACMVDILGRAGQLEKALEFIKGLAVE---PGP 581
           +            +  FK +A      +  M+    R G  E+AL F + +  E   P  
Sbjct: 446 LLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEEALRFFESMKREGLKPDD 505

Query: 582 AVWGALLGAC 591
           A   A+L AC
Sbjct: 506 ATMVAVLSAC 515



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 76/266 (28%), Positives = 125/266 (46%), Gaps = 22/266 (8%)

Query: 275 DLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIH 334
           D+   N  IS Y   G+   +LR+F+++     R +S +   +I  +   G   L   + 
Sbjct: 58  DIKEWNVAISSYMRTGRCSEALRVFKRM----PRWSSVSYNAMISGYLRNGEFELARMLF 113

Query: 335 SFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTE 394
               +  +VS + ++      Y R   +  AR+LF+   E+ + SWN +++GY QNG  +
Sbjct: 114 DEMPERDLVSWNVMIKG----YVRNRNLGKARELFERMPERDVCSWNTILSGYAQNGCVD 169

Query: 395 EAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVS-TAL 453
           +A  +F  M       N V+ +++LSA  Q   +        L  SR  E+   VS   L
Sbjct: 170 DARRVFDRMPEK----NDVSWNALLSAYVQNSKLEE---ACVLFGSR--ENWALVSWNCL 220

Query: 454 IDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSG 513
           +  + K   IVEAR+ FD M  +  V+WNT+I+GY  +G   EA QLF E     +    
Sbjct: 221 LGGFVKKKKIVEARQFFDSMKVRDVVSWNTIITGYAQNGEIDEARQLFDESPVHDV---- 276

Query: 514 VTFLSVLYACSHAGLVREGDEIFQSM 539
            T+ +++       +V E  E+F  M
Sbjct: 277 FTWTAMVSGYIQNRMVEEARELFDRM 302



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 78/299 (26%), Positives = 128/299 (42%), Gaps = 37/299 (12%)

Query: 339 KSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAIS 398
           KSG         A+S+ Y R      A ++F      S  S+NAMI+GY +NG  E A  
Sbjct: 53  KSGDSDIKEWNVAISS-YMRTGRCSEALRVFKRMPRWSSVSYNAMISGYLRNGEFELARM 111

Query: 399 LFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYA 458
           LF EM      P    VS  +     +   +LGK   EL + R  E ++     ++  YA
Sbjct: 112 LFDEM------PERDLVSWNVMIKGYVRNRNLGK-ARELFE-RMPERDVCSWNTILSGYA 163

Query: 459 KCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLS 518
           + G + +AR +FD M  K++V+WN ++S Y  +    EA  LF          S   +  
Sbjct: 164 QNGCVDDARRVFDRMPEKNDVSWNALLSAYVQNSKLEEACVLFG---------SRENWAL 214

Query: 519 VLYACSHAGLVR-----EGDEIFQSM-IHDHGFKPLAEHYACMVDILGRAGQLEKALEFI 572
           V + C   G V+     E  + F SM + D         +  ++    + G++++A +  
Sbjct: 215 VSWNCLLGGFVKKKKIVEARQFFDSMKVRD------VVSWNTIITGYAQNGEIDEARQLF 268

Query: 573 KGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPEN--VGYHVLLSNIYSAER 629
               V      W A++   + ++    AR    +LF+  PE   V ++ +L+     ER
Sbjct: 269 DESPVHD-VFTWTAMVSGYIQNRMVEEAR----ELFDRMPERNEVSWNAMLAGYVQGER 322



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 36/138 (26%), Positives = 69/138 (50%), Gaps = 8/138 (5%)

Query: 367 KLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLG 426
           K   +S +  +  WN  I+ Y + G   EA+ +F+ M       + V+ ++++S   + G
Sbjct: 49  KPLPKSGDSDIKEWNVAISSYMRTGRCSEALRVFKRMPRW----SSVSYNAMISGYLRNG 104

Query: 427 AISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMIS 486
              L + + + +  R+  S       +I  Y +  N+ +ARELF+ M  +   +WNT++S
Sbjct: 105 EFELARMLFDEMPERDLVS----WNVMIKGYVRNRNLGKARELFERMPERDVCSWNTILS 160

Query: 487 GYGLHGHGLEALQLFSEM 504
           GY  +G   +A ++F  M
Sbjct: 161 GYAQNGCVDDARRVFDRM 178


>gi|222631044|gb|EEE63176.1| hypothetical protein OsJ_17985 [Oryza sativa Japonica Group]
          Length = 745

 Score =  487 bits (1254), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 276/746 (36%), Positives = 414/746 (55%), Gaps = 61/746 (8%)

Query: 98  LRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFS 157
           LR  T L  D+FT   VL A         G   HG    +G+ S++F+  ALV +Y +  
Sbjct: 2   LRAGTRL--DHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCG 59

Query: 158 WVKSARKVFDKMPEK---DTVLWNSMISGLMKNCCFQDSIWVFGDMV-----RNGGTWLD 209
            ++ A  +FD++ ++   D + WNS++S  +K+     ++ +F  M      +      D
Sbjct: 60  SLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSD 119

Query: 210 STSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFR 269
             S+  +LPA   ++ +    E+    ++ G    V+V   L+  Y+KCG +E A  +F 
Sbjct: 120 IISIVNILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFN 179

Query: 270 DIVRPDLISCNAMISGYTCNGK-----------------------------------TES 294
            +   D++S NAM++GY+ +G                                    +  
Sbjct: 180 MMEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHE 239

Query: 295 SLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVS---------- 344
           +L +FRQ++ S    N  TI+ ++      G       IH++ LK+ +++          
Sbjct: 240 ALNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDE 299

Query: 345 NSSVLTALSTVYSRLNEMEAARKLFDES--SEKSLASWNAMIAGYTQNGLTEEAISLFQE 402
           +  V  AL  +YS+    +AAR +FD+    E+++ +W  MI G+ Q G + +A+ LF E
Sbjct: 300 DLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVE 359

Query: 403 M--QASKVAPNPVTVSSILSACAQLGAISLGKWVHELV-KSRNFESNIY-VSTALIDMYA 458
           M  +   VAPN  T+S IL ACA L AI +GK +H  V +   ++S+ Y V+  LI+MY+
Sbjct: 360 MISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINMYS 419

Query: 459 KCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLS 518
           KCG++  AR +FD MS KS ++W +M++GYG+HG G EAL +F +M  +G  P  +TFL 
Sbjct: 420 KCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLV 479

Query: 519 VLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVE 578
           VLYACSH G+V +G   F SM  D+G  P AEHYA  +D+L R G+L+KA + +K + +E
Sbjct: 480 VLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYAYAIDLLARFGRLDKAWKTVKDMPME 539

Query: 579 PGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVR 638
           P   VW ALL AC +H +  LA  A  KL E++ EN G + L+SNIY+    +   A +R
Sbjct: 540 PTAVVWVALLSACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVARIR 599

Query: 639 QVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETV 698
            ++KK  + K PGC+ ++       F  GD+ HP S  IYA+LE L  +++  G+  ET 
Sbjct: 600 HLMKKSGIKKRPGCSWVQGQKGTASFFVGDRSHPLSPQIYALLESLIDRIKAMGYVPETN 659

Query: 699 TALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVT 758
            ALHDV+EEEK  ++  HSEKLA+A+GL+ T PG  IRI KNLRVC DCH+A  +ISK+ 
Sbjct: 660 FALHDVDEEEKNNLLVEHSEKLALAYGLLTTFPGCPIRITKNLRVCGDCHSAFTYISKIV 719

Query: 759 GRVIVVRDANRFHHFKGGVCSCGDYW 784
              IVVRD +RFHHFK G CSCG YW
Sbjct: 720 DHEIVVRDPSRFHHFKNGSCSCGGYW 745



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 63/291 (21%), Positives = 123/291 (42%), Gaps = 9/291 (3%)

Query: 36  GFQNDLSTVTKLAHRLSDFKATCYARALFFSIP--KPDLFLFNVIIRGFSNNEMPKSSI- 92
           G   DL     L    S  ++   AR++F  IP  + ++  + V+I G +       ++ 
Sbjct: 296 GEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALK 355

Query: 93  CFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGY--GSDLFVGAALV 150
            F   + +   + P+ +T S +L A +      IG  +H + +       S  FV   L+
Sbjct: 356 LFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLI 415

Query: 151 DLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDS 210
           ++Y K   V +AR VFD M +K  + W SM++G   +    +++ +F D +R  G   D 
Sbjct: 416 NMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIF-DKMRKAGFVPDD 474

Query: 211 TSVAAVLPAVAEVQELRLGME-IQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFR 269
            +   VL A +    +  G+     +    G           +   ++ G +++A    +
Sbjct: 475 ITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYAYAIDLLARFGRLDKAWKTVK 534

Query: 270 DI-VRPDLISCNAMISGYTCNGKTESSLRLFRQLLA-SAERVNSSTIVGLI 318
           D+ + P  +   A++S    +   E +     +L+  +AE   S T++  I
Sbjct: 535 DMPMEPTAVVWVALLSACRVHSNVELAEHALNKLVEMNAENDGSYTLISNI 585


>gi|115464255|ref|NP_001055727.1| Os05g0455900 [Oryza sativa Japonica Group]
 gi|53749358|gb|AAU90217.1| unknow protein [Oryza sativa Japonica Group]
 gi|113579278|dbj|BAF17641.1| Os05g0455900 [Oryza sativa Japonica Group]
 gi|222631826|gb|EEE63958.1| hypothetical protein OsJ_18783 [Oryza sativa Japonica Group]
          Length = 874

 Score =  487 bits (1253), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 263/749 (35%), Positives = 421/749 (56%), Gaps = 8/749 (1%)

Query: 38  QNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTH 97
           + ++S  T L        + C    +F  +PK ++  +  ++ G ++ +M    +  +  
Sbjct: 132 RGEVSAGTSLVDMYMKCGSVCEGIEVFEGMPKKNVVTWTSLLTGCAHAQMHSEVMALFFR 191

Query: 98  LRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFS 157
           +R    + P+ FT++ VLSA ++     +G  +H  ++  G  S +FV  +L+++Y K  
Sbjct: 192 MRAE-GIWPNPFTFASVLSAVASQGALDLGQRVHAQSVKFGCRSSVFVCNSLMNMYAKCG 250

Query: 158 WVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVL 217
            V+ A+ VF+ M  +D V WN++++GL  N C  +++ +F +     G    ST  A V+
Sbjct: 251 LVEDAKSVFNWMETRDMVSWNTLMAGLQLNECELEALQLFHESRATMGKMTQST-YATVI 309

Query: 218 PAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIV-RPDL 276
              A +++L L  ++    LK GFH    V+T L   YSKCGE+  A  +F       ++
Sbjct: 310 KLCANLKQLALARQLHSCVLKHGFHLTGNVMTALADAYSKCGELADALNIFSMTTGSRNV 369

Query: 277 ISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSF 336
           +S  A+ISG   NG    ++ LF ++       N  T   ++          L   IH+ 
Sbjct: 370 VSWTAIISGCIQNGDIPLAVVLFSRMREDRVMPNEFTYSAMLKASLSI----LPPQIHAQ 425

Query: 337 CLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEA 396
            +K+       V TAL   YS+    E A  +F    +K + +W+AM++ + Q G  E A
Sbjct: 426 VIKTNYQHIPFVGTALLASYSKFGSTEDALSIFKMIEQKDVVAWSAMLSCHAQAGDCEGA 485

Query: 397 ISLFQEMQASKVAPNPVTVSSILSACAQLGA-ISLGKWVHELVKSRNFESNIYVSTALID 455
             LF +M    + PN  T+SS++ ACA   A +  G+  H +     +   I VS+AL+ 
Sbjct: 486 TYLFNKMAIQGIKPNEFTISSVIDACACPSAGVDQGRQFHAISIKYRYHDAICVSSALVS 545

Query: 456 MYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVT 515
           MY++ GNI  A+ +F+  + +  V+WN+MISGY  HG+ ++A++ F +M  SGI+  GVT
Sbjct: 546 MYSRKGNIDSAQIVFERQTDRDLVSWNSMISGYAQHGYSMKAIETFRQMEASGIQMDGVT 605

Query: 516 FLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGL 575
           FL+V+  C+H GLV EG + F SM+ DH   P  EHYACMVD+  RAG+L++ +  I+ +
Sbjct: 606 FLAVIMGCTHNGLVVEGQQYFDSMVRDHKINPTMEHYACMVDLYSRAGKLDETMSLIRDM 665

Query: 576 AVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAA 635
               G  VW  LLGAC +HK+  L + +++KL  L+P +   +VLLSNIY+A   + +  
Sbjct: 666 PFPAGAMVWRTLLGACRVHKNVELGKFSADKLLSLEPHDSSTYVLLSNIYAAAGKWKERD 725

Query: 636 TVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQT 695
            VR+++  RK+ K  GC+ I++    H F + D+ HP S  IY  L+ +  ++++ G+  
Sbjct: 726 EVRKLMDYRKVKKEAGCSWIQIKNKVHSFIAFDKSHPMSDQIYKKLKVIITRLKQDGYSP 785

Query: 696 ETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFIS 755
            T   LHD+ E++KE M+  HSE+LA+AFGLIAT PGT ++I+KNLRVC DCH   K +S
Sbjct: 786 NTSFVLHDIAEDQKEAMLVAHSERLALAFGLIATPPGTPLQIVKNLRVCGDCHMVMKMVS 845

Query: 756 KVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
            +  R I++RD +RFHHF GG CSCGD+W
Sbjct: 846 MIEDREIIMRDCSRFHHFNGGACSCGDFW 874



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 102/370 (27%), Positives = 178/370 (48%), Gaps = 16/370 (4%)

Query: 162 ARKVFDKMPEKDT------VLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAA 215
           AR   D++P +D       VL++    G++     Q S+       R GG  +DS +++ 
Sbjct: 51  ARYPLDEIPRRDAAVGANRVLFDYARRGMVLEVLDQFSV------ARRGGVLVDSATLSC 104

Query: 216 VLPAVAEVQELRLGMEIQCLGLKLGFHDH--VYVLTGLVSFYSKCGEVERAELLFRDIVR 273
           VL A   V +  LG ++ CL +K G HD   V   T LV  Y KCG V     +F  + +
Sbjct: 105 VLKACRSVPDRVLGEQLHCLCVKCG-HDRGEVSAGTSLVDMYMKCGSVCEGIEVFEGMPK 163

Query: 274 PDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCI 333
            ++++  ++++G          + LF ++ A     N  T   ++      G L L   +
Sbjct: 164 KNVVTWTSLLTGCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVASQGALDLGQRV 223

Query: 334 HSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLT 393
           H+  +K G  S+  V  +L  +Y++   +E A+ +F+    + + SWN ++AG   N   
Sbjct: 224 HAQSVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSWNTLMAGLQLNECE 283

Query: 394 EEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTAL 453
            EA+ LF E +A+       T ++++  CA L  ++L + +H  V    F     V TAL
Sbjct: 284 LEALQLFHESRATMGKMTQSTYATVIKLCANLKQLALARQLHSCVLKHGFHLTGNVMTAL 343

Query: 454 IDMYAKCGNIVEARELFDLMS-HKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPS 512
            D Y+KCG + +A  +F + +  ++ V+W  +ISG   +G    A+ LFS M    + P+
Sbjct: 344 ADAYSKCGELADALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMREDRVMPN 403

Query: 513 GVTFLSVLYA 522
             T+ ++L A
Sbjct: 404 EFTYSAMLKA 413



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 117/482 (24%), Positives = 220/482 (45%), Gaps = 61/482 (12%)

Query: 8   SRNLFLSLLKGAKTQSQLT---QTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALF 64
           +++ + +++K      QL    Q H+ ++ HGF    + +T LA   S       A  +F
Sbjct: 301 TQSTYATVIKLCANLKQLALARQLHSCVLKHGFHLTGNVMTALADAYSKCGELADALNIF 360

Query: 65  -FSIPKPDLFLFNVIIRG-FSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACC 122
             +    ++  +  II G   N ++P + + F + +R++  + P+ FTYS +L A     
Sbjct: 361 SMTTGSRNVVSWTAIISGCIQNGDIPLAVVLF-SRMREDRVM-PNEFTYSAMLKA----- 413

Query: 123 DRSIGVL---LHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNS 179
             S+ +L   +H   I + Y    FVG AL+  Y KF   + A  +F  + +KD V W++
Sbjct: 414 --SLSILPPQIHAQVIKTNYQHIPFVGTALLASYSKFGSTEDALSIFKMIEQKDVVAWSA 471

Query: 180 MISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVA-EVQELRLGMEIQCLGLK 238
           M+S   +    + + ++F  M    G   +  ++++V+ A A     +  G +   + +K
Sbjct: 472 MLSCHAQAGDCEGATYLFNKMAIQ-GIKPNEFTISSVIDACACPSAGVDQGRQFHAISIK 530

Query: 239 LGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRL 298
             +HD + V + LVS YS+ G ++ A+++F      DL+S N+MISGY  +G +  ++  
Sbjct: 531 YRYHDAICVSSALVSMYSRKGNIDSAQIVFERQTDRDLVSWNSMISGYAQHGYSMKAIET 590

Query: 299 FRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSR 358
           FRQ+ AS  +++  T + +I             C H+  +  G     S++         
Sbjct: 591 FRQMEASGIQMDGVTFLAVI-----------MGCTHNGLVVEGQQYFDSMVR-------- 631

Query: 359 LNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTV--- 415
                      D     ++  +  M+  Y++ G  +E +SL ++M      P P      
Sbjct: 632 -----------DHKINPTMEHYACMVDLYSRAGKLDETMSLIRDM------PFPAGAMVW 674

Query: 416 SSILSACAQLGAISLGKW-VHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMS 474
            ++L AC     + LGK+   +L+     +S+ YV   L ++YA  G   E  E+  LM 
Sbjct: 675 RTLLGACRVHKNVELGKFSADKLLSLEPHDSSTYV--LLSNIYAAAGKWKERDEVRKLMD 732

Query: 475 HK 476
           ++
Sbjct: 733 YR 734



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 55/179 (30%), Positives = 87/179 (48%), Gaps = 2/179 (1%)

Query: 359 LNEMEAARKLFDESSEKSLA-SWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSS 417
           L +   AR   DE   +  A   N ++  Y + G+  E +  F   +   V  +  T+S 
Sbjct: 45  LRDPPGARYPLDEIPRRDAAVGANRVLFDYARRGMVLEVLDQFSVARRGGVLVDSATLSC 104

Query: 418 ILSACAQLGAISLGKWVHEL-VKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHK 476
           +L AC  +    LG+ +H L VK  +    +   T+L+DMY KCG++ E  E+F+ M  K
Sbjct: 105 VLKACRSVPDRVLGEQLHCLCVKCGHDRGEVSAGTSLVDMYMKCGSVCEGIEVFEGMPKK 164

Query: 477 SEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEI 535
           + VTW ++++G        E + LF  M   GI P+  TF SVL A +  G +  G  +
Sbjct: 165 NVVTWTSLLTGCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVASQGALDLGQRV 223


>gi|359482660|ref|XP_002285225.2| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
           chloroplastic-like [Vitis vinifera]
          Length = 872

 Score =  487 bits (1253), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 276/752 (36%), Positives = 422/752 (56%), Gaps = 15/752 (1%)

Query: 43  TVTKLAHRLSDFKATCYAR--------ALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICF 94
           TVT+L  RL +   + + R         +F  + + DLF +NV++ G++       ++  
Sbjct: 123 TVTRLGVRLGNALLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNL 182

Query: 95  YTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYF 154
           Y H      + PD +T+  VL       D + G  +H H I  G+ SD+ V  AL+ +Y 
Sbjct: 183 Y-HRMLWVGIRPDVYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYV 241

Query: 155 KFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVA 214
           K   + SAR VFD+MP +D + WN+MISG  +N    + + +F  M+R      D  ++ 
Sbjct: 242 KCGDIFSARLVFDRMPRRDRISWNAMISGYFENDVCLEGLRLFF-MMREFFVDPDLMTMT 300

Query: 215 AVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRP 274
           +V+ A   + + RLG E+    +K GF   V V   L+  +S  G  + AE++F  +   
Sbjct: 301 SVISACEALGDERLGREVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFK 360

Query: 275 DLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIH 334
           DL+S  AMISGY  NG  E ++  +  +       +  TI  ++      G L     +H
Sbjct: 361 DLVSWTAMISGYEKNGLPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGLLDKGIMLH 420

Query: 335 SFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTE 394
            F  ++G+ S   V  +L  +YS+   ++ A ++F     K++ SW ++I G   N  + 
Sbjct: 421 EFADRTGLTSYVIVANSLIDMYSKCRCIDKALEVFHRIPNKNVISWTSIILGLRLNYRSF 480

Query: 395 EAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALI 454
           EA+  FQ+M  S + PN VT+ S+LSACA++GA+S GK +H          + ++  AL+
Sbjct: 481 EALFFFQQMILS-LKPNSVTLVSVLSACARIGALSCGKEIHAHALRTGLGFDGFLPNALL 539

Query: 455 DMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGV 514
           DMY +CG +  A   F+    K   +WN +++GY   G G  A++LF +M+ S + P  +
Sbjct: 540 DMYVRCGRMEPAWNQFN-SCEKDVASWNILLTGYAQQGKGGLAVELFHKMIESDVNPDEI 598

Query: 515 TFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKG 574
           TF S+L ACS +G+V +G E F+SM H     P  +HYA +VD+LGRAG+LE A EFIK 
Sbjct: 599 TFTSLLCACSRSGMVTDGLEYFESMEHKFHIAPNLKHYASVVDLLGRAGRLEDAYEFIKK 658

Query: 575 LAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQA 634
           + ++P PA+WGALL AC I+++  L  +A++ +FE+D ++VGY++LL N+Y+    + + 
Sbjct: 659 MPIDPDPAIWGALLNACRIYQNVELGELAAQHIFEMDTKSVGYYILLCNLYADSGKWDEV 718

Query: 635 ATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQ 694
           A VR+++++ +L   PGC+ +EV G  H F +GD  HPQ   I A+LE    KM   G  
Sbjct: 719 ARVRKIMRENRLTVDPGCSWVEVAGQVHAFLTGDDFHPQIKEINAVLEGFYEKMEATGLS 778

Query: 695 TETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFI 754
               +   D++  + E+    HSE+LAIAFGLI T PGT I + KNL +C +CH   KFI
Sbjct: 779 MSKDSRRDDIDASKAEIFCG-HSERLAIAFGLINTVPGTPIWVTKNLYMCENCHNTVKFI 837

Query: 755 SKVTGRVIVVRDANRFHHFKGGVCSCGD--YW 784
           SKV  R I VRD  +FHHFK GVCSCGD  YW
Sbjct: 838 SKVVRRGISVRDTEQFHHFKDGVCSCGDEGYW 869



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 71/208 (34%), Positives = 111/208 (53%)

Query: 333 IHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGL 392
           +HS+  K+       +  AL +++ R  ++  A  +F + +E+ L SWN ++ GY + G 
Sbjct: 116 VHSYVSKTVTRLGVRLGNALLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGY 175

Query: 393 TEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTA 452
            +EA++L+  M    + P+  T   +L  C  L  ++ G+ VH  V    FES++ V  A
Sbjct: 176 FDEALNLYHRMLWVGIRPDVYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNA 235

Query: 453 LIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPS 512
           LI MY KCG+I  AR +FD M  +  ++WN MISGY  +   LE L+LF  M    + P 
Sbjct: 236 LITMYVKCGDIFSARLVFDRMPRRDRISWNAMISGYFENDVCLEGLRLFFMMREFFVDPD 295

Query: 513 GVTFLSVLYACSHAGLVREGDEIFQSMI 540
            +T  SV+ AC   G  R G E+   +I
Sbjct: 296 LMTMTSVISACEALGDERLGREVHGYVI 323



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 53/188 (28%), Positives = 87/188 (46%), Gaps = 1/188 (0%)

Query: 381 NAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKS 440
           N++I      G  E+A+     MQ  +V+    T  ++L  C    A S G  VH  V  
Sbjct: 63  NSLILELCLKGDLEKALIHLDSMQELQVSVEEETYIALLRLCEWKRAASEGSRVHSYVSK 122

Query: 441 RNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQL 500
                 + +  AL+ M+ + G++VEA  +F  M+ +   +WN ++ GY   G+  EAL L
Sbjct: 123 TVTRLGVRLGNALLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNL 182

Query: 501 FSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILG 560
           +  ML  GIRP   TF  VL  C     +  G E+   +I  +GF+   +    ++ +  
Sbjct: 183 YHRMLWVGIRPDVYTFPCVLRTCGGLPDLARGREVHLHVIR-YGFESDVDVVNALITMYV 241

Query: 561 RAGQLEKA 568
           + G +  A
Sbjct: 242 KCGDIFSA 249


>gi|356552027|ref|XP_003544373.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g16860-like [Glycine max]
          Length = 986

 Score =  486 bits (1252), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 286/826 (34%), Positives = 435/826 (52%), Gaps = 58/826 (7%)

Query: 13  LSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKP-- 70
           ++ LK   + +     H Q I+ G    L+T     +  S+  +T YA  L   +P    
Sbjct: 165 ITALKECNSLAHAKLLHQQSIMQGLLFHLATNLIGTYIASN--STAYAILLLERLPPSPS 222

Query: 71  DLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLL 130
            +F +N +IR   +   P+     Y  + K+   TPD++T+ FV  A +     S+G  L
Sbjct: 223 SVFWWNQLIRRALHLGSPRDVFTLYRQM-KSLGWTPDHYTFPFVFKACANLSSLSLGASL 281

Query: 131 HGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEK---DTVLWNSMISGLMKN 187
           H     SG+ S++FV  A+V +Y K   ++ A  +FD +  +   D V WNS++S  M  
Sbjct: 282 HATVSRSGFASNVFVCNAVVSMYGKCGALRHAHNMFDDLCHRGIQDLVSWNSVVSAYMWA 341

Query: 188 CCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYV 247
                ++ +F  M        D  S+  +LPA A +     G ++    ++ G  D V+V
Sbjct: 342 SDANTALALFHKMTTRHLMSPDVISLVNILPACASLAASLRGRQVHGFSIRSGLVDDVFV 401

Query: 248 LTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLF-------- 299
              +V  Y+KCG++E A  +F+ +   D++S NAM++GY+  G+ E +L LF        
Sbjct: 402 GNAVVDMYAKCGKMEEANKVFQRMKFKDVVSWNAMVTGYSQAGRLEHALSLFERMTEENI 461

Query: 300 ---------------------------RQLLASAERVNSSTIVGLIPVFYPFGHLHLTNC 332
                                      RQ+     R N  T+V L+      G L     
Sbjct: 462 ELDVVTWTAVITGYAQRGQGCEALDVFRQMCDCGSRPNVVTLVSLLSACVSVGALLHGKE 521

Query: 333 IHSFCLKSGI--------VSNSSVLTALSTVYSRLNEMEAARKLFDESS--EKSLASWNA 382
            H + +K  +          +  V+  L  +Y++    E ARK+FD  S  ++ + +W  
Sbjct: 522 THCYAIKFILNLDGPDPGADDLKVINGLIDMYAKCQSTEVARKMFDSVSPKDRDVVTWTV 581

Query: 383 MIAGYTQNGLTEEAISLFQEM--QASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKS 440
           MI GY Q+G    A+ LF  M      + PN  T+S  L ACA+L A+  G+ VH  V  
Sbjct: 582 MIGGYAQHGDANNALQLFSGMFKMDKSIKPNDFTLSCALVACARLAALRFGRQVHAYVL- 640

Query: 441 RNFESNI--YVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEAL 498
           RNF  ++  +V+  LIDMY+K G++  A+ +FD M  ++ V+W ++++GYG+HG G +AL
Sbjct: 641 RNFYGSVMLFVANCLIDMYSKSGDVDTAQIVFDNMPQRNAVSWTSLMTGYGMHGRGEDAL 700

Query: 499 QLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDI 558
           ++F EM    + P G+TFL VLYACSH+G+V  G   F  M  D G  P  EHYACMVD+
Sbjct: 701 RVFDEMRKVPLVPDGITFLVVLYACSHSGMVDHGINFFNRMSKDFGVDPGPEHYACMVDL 760

Query: 559 LGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYH 618
            GRAG+L +A++ I  + +EP P VW ALL AC +H +  L   A+ +L EL+  N G +
Sbjct: 761 WGRAGRLGEAMKLINEMPMEPTPVVWVALLSACRLHSNVELGEFAANRLLELESGNDGSY 820

Query: 619 VLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIY 678
            LLSNIY+  R +   A +R  +K+  + K PGC+ I+       F  GD+ HPQS  IY
Sbjct: 821 TLLSNIYANARRWKDVARIRYTMKRTGIKKRPGCSWIQGRKGVATFYVGDRSHPQSQQIY 880

Query: 679 AMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRII 738
             L  L  +++  G+  +T  ALHDV++EEK  ++  HSEKLA+A+G++   P   IRI 
Sbjct: 881 ETLADLIQRIKAIGYVPQTSFALHDVDDEEKGDLLFEHSEKLALAYGILTLHPRAPIRIT 940

Query: 739 KNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           KNLR+C DCH+A  +ISK+    I++RD++RFHHFK G CSC  YW
Sbjct: 941 KNLRICGDCHSAITYISKIIEHEIILRDSSRFHHFKNGSCSCKGYW 986


>gi|297738034|emb|CBI27235.3| unnamed protein product [Vitis vinifera]
          Length = 696

 Score =  486 bits (1252), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 255/645 (39%), Positives = 385/645 (59%), Gaps = 31/645 (4%)

Query: 170 PEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLG 229
           P + T  W   +    ++  F+++I  + +M  +G    D+ +  AVL AV+ +Q+L+ G
Sbjct: 53  PSRSTASWVDALRSRTRSNDFREAISTYIEMTVSGAR-PDNFAFPAVLKAVSGLQDLKTG 111

Query: 230 MEIQCLGLKLGFH---------------------DHVYVLTGLVSFYSKCGEVERAELLF 268
            +I    +K G+                      D  +    L++ Y+K G V+ ++ LF
Sbjct: 112 EQIHAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDKTFTNNALMAMYAKLGRVDDSKALF 171

Query: 269 RDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLH 328
              V  D++S N MIS ++ + +   +L  FR ++     ++  TI  ++P       L 
Sbjct: 172 ESFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGVTIASVLPACSHLERLD 231

Query: 329 LTNCIHSFCLKSG-IVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGY 387
           +   IH++ L++  ++ NS V +AL  +Y    ++E+ R++FD    + +  WNAMI+GY
Sbjct: 232 VGKEIHAYVLRNNDLIENSFVGSALVDMYCNCRQVESGRRVFDHILGRRIELWNAMISGY 291

Query: 388 TQNGLTEEAISLFQEM-QASKVAPNPVTVSSILSACAQ-LGAISLGKWVHELVKSRNFES 445
            +NGL E+A+ LF EM + + + PN  T++S++ AC   L AI+ GK +H         S
Sbjct: 292 ARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHSLAAIAKGKEIHAYAIRNMLAS 351

Query: 446 NIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEML 505
           +I V +AL+DMYAKCG +  +R +F+ M +K+ +TWN +I   G+HG G EAL+LF  M+
Sbjct: 352 DITVGSALVDMYAKCGCLNLSRRVFNEMPNKNVITWNVLIMACGMHGKGEEALELFKNMV 411

Query: 506 HSGIR-----PSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILG 560
               R     P+ VTF++V  ACSH+GL+ EG  +F  M HDHG +P ++HYAC+VD+LG
Sbjct: 412 AEAGRGGEAKPNEVTFITVFAACSHSGLISEGLNLFYRMKHDHGVEPTSDHYACVVDLLG 471

Query: 561 RAGQLEKALEFIKGLAVE-PGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHV 619
           RAGQLE+A E +  +  E      W +LLGAC IH++  L  VA++ L  L+P    ++V
Sbjct: 472 RAGQLEEAYELVNTMPAEFDKVGAWSSLLGACRIHQNVELGEVAAKNLLHLEPNVASHYV 531

Query: 620 LLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYA 679
           LLSNIYS+   + +A  VR+ +++  + K PGC+ IE     H F +GD  HPQS  ++ 
Sbjct: 532 LLSNIYSSAGLWNKAMEVRKNMRQMGVKKEPGCSWIEFRDEVHKFMAGDVSHPQSEQLHG 591

Query: 680 MLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIK 739
            LE L+ KMR+ G+  +T   LH+V+E+EKE ++  HSEKLAIAFG++ T PGT IR+ K
Sbjct: 592 FLETLSEKMRKEGYVPDTSCVLHNVDEDEKENLLCGHSEKLAIAFGILNTPPGTTIRVAK 651

Query: 740 NLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           NLRVC DCH ATKFISK+  R I+VRD  RFHHFK G CSCGDYW
Sbjct: 652 NLRVCNDCHAATKFISKIMEREIIVRDVRRFHHFKEGTCSCGDYW 696



 Score =  168 bits (426), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 138/511 (27%), Positives = 234/511 (45%), Gaps = 73/511 (14%)

Query: 106 PDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSD---------------------LF 144
           PDNF +  VL A S   D   G  +H  A+  GYGS                       F
Sbjct: 90  PDNFAFPAVLKAVSGLQDLKTGEQIHAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDKTF 149

Query: 145 VGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNG 204
              AL+ +Y K   V  ++ +F+   ++D V WN+MIS   ++  F +++  F  MV   
Sbjct: 150 TNNALMAMYAKLGRVDDSKALFESFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLE- 208

Query: 205 GTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLG-FHDHVYVLTGLVSFYSKCGEVER 263
           G  LD  ++A+VLPA + ++ L +G EI    L+     ++ +V + LV  Y  C +VE 
Sbjct: 209 GVELDGVTIASVLPACSHLERLDVGKEIHAYVLRNNDLIENSFVGSALVDMYCNCRQVES 268

Query: 264 AELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERV-NSSTIVGLIPV-F 321
              +F  I+   +   NAMISGY  NG  E +L LF +++  A  + N++T+  ++P   
Sbjct: 269 GRRVFDHILGRRIELWNAMISGYARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACV 328

Query: 322 YPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWN 381
           +    +     IH++ +++ + S+ +V +AL  +Y++   +  +R++F+E   K++ +WN
Sbjct: 329 HSLAAIAKGKEIHAYAIRNMLASDITVGSALVDMYAKCGCLNLSRRVFNEMPNKNVITWN 388

Query: 382 AMIAGYTQNGLTEEAISLFQEMQAS-----KVAPNPVTVSSILSACAQLGAISLG-KWVH 435
            +I     +G  EEA+ LF+ M A      +  PN VT  ++ +AC+  G IS G    +
Sbjct: 389 VLIMACGMHGKGEEALELFKNMVAEAGRGGEAKPNEVTFITVFAACSHSGLISEGLNLFY 448

Query: 436 ELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGL 495
            +      E        ++D+  + G + EA EL            NTM + +   G   
Sbjct: 449 RMKHDHGVEPTSDHYACVVDLLGRAGQLEEAYELV-----------NTMPAEFDKVG--- 494

Query: 496 EALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKP-LAEHYAC 554
                               + S+L AC     V  G+   ++++H    +P +A HY  
Sbjct: 495 -------------------AWSSLLGACRIHQNVELGEVAAKNLLH---LEPNVASHYVL 532

Query: 555 MVDILGRAGQLEKALEFIK-----GLAVEPG 580
           + +I   AG   KA+E  K     G+  EPG
Sbjct: 533 LSNIYSSAGLWNKAMEVRKNMRQMGVKKEPG 563



 Score =  115 bits (289), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 111/411 (27%), Positives = 186/411 (45%), Gaps = 52/411 (12%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           ++ALF S    D+  +N +I  FS ++    ++ F+  L     +  D  T + VL A S
Sbjct: 167 SKALFESFVDRDMVSWNTMISSFSQSDRFSEALAFF-RLMVLEGVELDGVTIASVLPACS 225

Query: 120 ACCDRSIGVLLHGHAIVSGYGSDL----FVGAALVDLYFKFSWVKSARKVFDKMPEKDTV 175
                 +G  +H + +     +DL    FVG+ALVD+Y     V+S R+VFD +  +   
Sbjct: 226 HLERLDVGKEIHAYVL---RNNDLIENSFVGSALVDMYCNCRQVESGRRVFDHILGRRIE 282

Query: 176 LWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPA-VAEVQELRLGMEIQC 234
           LWN+MISG  +N   + ++ +F +M++  G   ++T++A+V+PA V  +  +  G EI  
Sbjct: 283 LWNAMISGYARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHSLAAIAKGKEIHA 342

Query: 235 LGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTES 294
             ++      + V + LV  Y+KCG +  +  +F ++   ++I+ N +I     +GK E 
Sbjct: 343 YAIRNMLASDITVGSALVDMYAKCGCLNLSRRVFNEMPNKNVITWNVLIMACGMHGKGEE 402

Query: 295 SLRLFRQLLASAERVNSSTI--VGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTAL 352
           +L LF+ ++A A R   +    V  I VF             + C  SG++S       L
Sbjct: 403 ALELFKNMVAEAGRGGEAKPNEVTFITVF-------------AACSHSGLISE-----GL 444

Query: 353 STVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQA--SKVAP 410
           +  Y         R   D   E +   +  ++    + G  EEA  L   M A   KV  
Sbjct: 445 NLFY---------RMKHDHGVEPTSDHYACVVDLLGRAGQLEEAYELVNTMPAEFDKVG- 494

Query: 411 NPVTVSSILSAC-----AQLGAISLGKWVH---ELVKSRNFESNIYVSTAL 453
                SS+L AC      +LG ++    +H    +       SNIY S  L
Sbjct: 495 ---AWSSLLGACRIHQNVELGEVAAKNLLHLEPNVASHYVLLSNIYSSAGL 542



 Score = 86.7 bits (213), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 67/241 (27%), Positives = 109/241 (45%), Gaps = 28/241 (11%)

Query: 372 SSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLG 431
           S  +S ASW   +   T++    EAIS + EM  S   P+     ++L A + L  +  G
Sbjct: 52  SPSRSTASWVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTG 111

Query: 432 KWVH-ELVKSRNFESNIYVSTALIDMYAKCGNI--------------------VEARELF 470
           + +H   VK     S++ V+  L++MY KCG I                     +++ LF
Sbjct: 112 EQIHAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDKTFTNNALMAMYAKLGRVDDSKALF 171

Query: 471 DLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVR 530
           +    +  V+WNTMIS +       EAL  F  M+  G+   GVT  SVL ACSH   + 
Sbjct: 172 ESFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGVTIASVLPACSHLERLD 231

Query: 531 EGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLE---KALEFIKGLAVEPGPAVWGAL 587
            G EI   ++ ++     +   + +VD+     Q+E   +  + I G  +E    +W A+
Sbjct: 232 VGKEIHAYVLRNNDLIENSFVGSALVDMYCNCRQVESGRRVFDHILGRRIE----LWNAM 287

Query: 588 L 588
           +
Sbjct: 288 I 288


>gi|347954518|gb|AEP33759.1| organelle transcript processing 82, partial [Brassica oleracea]
          Length = 691

 Score =  486 bits (1251), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 261/663 (39%), Positives = 383/663 (57%), Gaps = 35/663 (5%)

Query: 156 FSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAA 215
           F  +  A  VF+   E + ++WN+M+ GL  +      + ++  MV  G    ++ +   
Sbjct: 30  FDGLPYAVSVFETXQEPNLLIWNTMLRGLASSSDLVSPLEMYVRMVSXGHV-PNAYTFPF 88

Query: 216 VLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLF-----RD 270
           +L + A+ +    G +I    +KLG     Y  T L+S Y++ G +E A  +F     RD
Sbjct: 89  LLKSCAKSKTFEEGRQIHAQVMKLGCELDRYAHTSLISMYARNGRLEDARKVFDXSSQRD 148

Query: 271 IV--------------------------RPDLISCNAMISGYTCNGKTESSLRLFRQLLA 304
           +V                            D++S NAMI+GY  N   E +L LF++++ 
Sbjct: 149 VVSCTALITGYASRGDVRSARKVFDXITERDVVSWNAMITGYVENCGYEEALELFKEMMR 208

Query: 305 SAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKS-GIVSNSSVLTALSTVYSRLNEME 363
           +  R +  T+V ++      G + L   IH+      G  S+  ++ A   +YS+  ++E
Sbjct: 209 TNVRPDEGTLVSVLSACAQSGSIELGREIHTLVDDHHGFGSSLKIVNAFIGLYSKCGDVE 268

Query: 364 AARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACA 423
            A  LF+  S K + SWN +I GYT   L +EA+ LFQEM  S  +PN VT+ S+L ACA
Sbjct: 269 IASGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACA 328

Query: 424 QLGAISLGKWVHELVKSR--NFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTW 481
            LGAI +G+W+H  +  R     +   + T+LIDMYAKCG+I  A ++F+ M HKS  +W
Sbjct: 329 HLGAIDIGRWIHVYIDKRLKGVTNGSALRTSLIDMYAKCGDIEAAHQVFNSMMHKSLSSW 388

Query: 482 NTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIH 541
           N MI G+ +HG    A  LFS M  +GI P  +T + +L ACSH+GL+  G  IF+S+  
Sbjct: 389 NAMIFGFAMHGRANAAFDLFSRMRKNGIEPDDITLVGLLSACSHSGLLDLGRHIFKSVTQ 448

Query: 542 DHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLAR 601
           D+   P  EHY CM+D+LG AG  ++A E I  + +EP   +W +LL AC +H +  LA 
Sbjct: 449 DYNITPKLEHYGCMIDLLGHAGLFKEAEEIIHMMPMEPDGVIWCSLLKACKMHGNLELAE 508

Query: 602 VASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTP 661
             ++KL E++PEN G +VLLSNIY+    +   A +R+V+  + + K PGC+ IE+    
Sbjct: 509 SFAQKLMEIEPENSGSYVLLSNIYATAGRWEDVARIREVLNGKGMKKVPGCSSIEIDSVV 568

Query: 662 HVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLA 721
           H F  GD+LHPQS  IY MLE+++  + EAGF  +T   L ++EEE KE  ++ HSEKLA
Sbjct: 569 HEFIIGDKLHPQSREIYRMLEEMDVLLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLA 628

Query: 722 IAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCG 781
           IAFGLI+T+PGT++ ++KNLRVC +CH ATK ISK+  R IV RD  RFHHF+ GVCSC 
Sbjct: 629 IAFGLISTKPGTKLTVVKNLRVCRNCHEATKLISKIYKREIVARDRTRFHHFRDGVCSCC 688

Query: 782 DYW 784
           DYW
Sbjct: 689 DYW 691



 Score =  216 bits (550), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 147/537 (27%), Positives = 266/537 (49%), Gaps = 46/537 (8%)

Query: 28  THAQIIIHGFQND---LSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSN 84
           THAQ++  G  N    LS + +L      F    YA ++F +  +P+L ++N ++RG ++
Sbjct: 1   THAQMVKTGLHNTNYALSKLLELCVVSPHFDGLPYAVSVFETXQEPNLLIWNTMLRGLAS 60

Query: 85  NEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLF 144
           +    S +  Y  +  +    P+ +T+ F+L + +       G  +H   +  G   D +
Sbjct: 61  SSDLVSPLEMYVRM-VSXGHVPNAYTFPFLLKSCAKSKTFEEGRQIHAQVMKLGCELDRY 119

Query: 145 VGAALVDLYFKFSWVKSARKVFDK-------------------------------MPEKD 173
              +L+ +Y +   ++ ARKVFD                                + E+D
Sbjct: 120 AHTSLISMYARNGRLEDARKVFDXSSQRDVVSCTALITGYASRGDVRSARKVFDXITERD 179

Query: 174 TVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQ 233
            V WN+MI+G ++NC +++++ +F +M+R      D  ++ +VL A A+   + LG EI 
Sbjct: 180 VVSWNAMITGYVENCGYEEALELFKEMMRT-NVRPDEGTLVSVLSACAQSGSIELGREIH 238

Query: 234 CL-GLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKT 292
            L     GF   + ++   +  YSKCG+VE A  LF  +   D++S N +I GYT     
Sbjct: 239 TLVDDHHGFGSSLKIVNAFIGLYSKCGDVEIASGLFEGLSCKDVVSWNTLIGGYTHMNLY 298

Query: 293 ESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLK--SGIVSNSSVLT 350
           + +L LF+++L S E  N  T++ ++P     G + +   IH +  K   G+ + S++ T
Sbjct: 299 KEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWIHVYIDKRLKGVTNGSALRT 358

Query: 351 ALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAP 410
           +L  +Y++  ++EAA ++F+    KSL+SWNAMI G+  +G    A  LF  M+ + + P
Sbjct: 359 SLIDMYAKCGDIEAAHQVFNSMMHKSLSSWNAMIFGFAMHGRANAAFDLFSRMRKNGIEP 418

Query: 411 NPVTVSSILSACAQLGAISLGKWVHELV-KSRNFESNIYVSTALIDMYAKCGNIVEAREL 469
           + +T+  +LSAC+  G + LG+ + + V +  N    +     +ID+    G   EA E+
Sbjct: 419 DDITLVGLLSACSHSGLLDLGRHIFKSVTQDYNITPKLEHYGCMIDLLGHAGLFKEAEEI 478

Query: 470 FDLMSHKSE-VTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSG---VTFLSVLYA 522
             +M  + + V W +++    +HG+ LE  + F++ L   I P        LS +YA
Sbjct: 479 IHMMPMEPDGVIWCSLLKACKMHGN-LELAESFAQKLME-IEPENSGSYVLLSNIYA 533


>gi|347954540|gb|AEP33770.1| organelle transcript processing 82, partial [Raphanus sativus]
          Length = 675

 Score =  486 bits (1250), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 263/666 (39%), Positives = 389/666 (58%), Gaps = 38/666 (5%)

Query: 156 FSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAA 215
           F  +  A  VF+ + E + ++WN+M+ G   +     ++ ++  MV + G   +S S   
Sbjct: 11  FDGLPYAISVFETIQEPNLLIWNTMLRGHASSSDPVSALEMYVRMV-SLGHLPNSYSFPF 69

Query: 216 VLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLF-----RD 270
           +L + A+ +    G +I    LKLG     YV T L+S Y++ G +E A  +F     RD
Sbjct: 70  LLKSCAKSKAFEEGRQIHAQVLKLGCGLDRYVHTSLISMYARNGGLEDARKVFDASSHRD 129

Query: 271 IV--------------------------RPDLISCNAMISGYTCNGKTESSLRLFRQLLA 304
           +V                            D++S NAMI+GY  NG+ E +L LF++++ 
Sbjct: 130 VVSCTALITGYASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEALELFKEMMR 189

Query: 305 SAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKS----GIVSNSSVLTALSTVYSRLN 360
           +  R +  T+V ++      G + L   +HS+        G  S+  ++ AL  +YS+  
Sbjct: 190 TNVRPDEGTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKCG 249

Query: 361 EMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILS 420
           ++E A  LF+  S K + SWN +I GYT   L +EA+ LFQEM  S   PN VT+ S+L 
Sbjct: 250 DVETAFGLFEGLSCKDVVSWNTLIGGYTHTNLYKEALLLFQEMLRSGECPNDVTLLSVLP 309

Query: 421 ACAQLGAISLGKWVHELV--KSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSE 478
           ACA LGAI +G+W+H  +  K +   +   + T+LIDMYAKCG+I  A ++F+ M ++S 
Sbjct: 310 ACAHLGAIDIGRWIHVYIDKKLKGVTNETSLRTSLIDMYAKCGDIEAAHQVFNSMLYRSL 369

Query: 479 VTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQS 538
            +WN MI G+ +HG    A  LFS M  + + P  +TF+ +L ACSH+GL+  G +IF+S
Sbjct: 370 SSWNAMIFGFAMHGRANAAFDLFSRMRGNRVEPDDITFVGLLSACSHSGLLDLGRQIFKS 429

Query: 539 MIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTN 598
           M  D+   P  EHY CM+D+LG +G  ++A E I  + +EP   +W +LL AC  H +  
Sbjct: 430 MTQDYNLTPKLEHYGCMIDLLGHSGLFKEAEEMIHTMPMEPDGVIWCSLLKACKKHGNLE 489

Query: 599 LARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVG 658
           LA   ++KL +++PEN G +VLLSNIY+    +   A VR V+  + + K PGC+ IEV 
Sbjct: 490 LAESFAQKLIKIEPENSGSYVLLSNIYATAGRWEDVARVRGVLNGKGMKKVPGCSSIEVD 549

Query: 659 GTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSE 718
              H F  GD+LHP+   IY MLE+++ ++ EAGF  +T   L ++EEE KE  ++ HSE
Sbjct: 550 SVVHEFIIGDKLHPRRREIYHMLEEMDVQLEEAGFAPDTSEVLQEMEEEWKEGALRHHSE 609

Query: 719 KLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVC 778
           KLAIAFGLI+T+PGT++ I+KNLRVC +CH ATK ISK+  R IV RD  RFHHF+ GVC
Sbjct: 610 KLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIVARDRTRFHHFRDGVC 669

Query: 779 SCGDYW 784
           SC DYW
Sbjct: 670 SCCDYW 675



 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 132/491 (26%), Positives = 251/491 (51%), Gaps = 42/491 (8%)

Query: 54  FKATCYARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSF 113
           F    YA ++F +I +P+L ++N ++RG +++  P S++  Y  +     L P+++++ F
Sbjct: 11  FDGLPYAISVFETIQEPNLLIWNTMLRGHASSSDPVSALEMYVRMVSLGHL-PNSYSFPF 69

Query: 114 VLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWV-------------- 159
           +L + +       G  +H   +  G G D +V  +L+ +Y +   +              
Sbjct: 70  LLKSCAKSKAFEEGRQIHAQVLKLGCGLDRYVHTSLISMYARNGGLEDARKVFDASSHRD 129

Query: 160 -----------------KSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVR 202
                            +SARKVFD++ E+D V WN+MI+G ++N  +++++ +F +M+R
Sbjct: 130 VVSCTALITGYASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEALELFKEMMR 189

Query: 203 NGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKL----GFHDHVYVLTGLVSFYSKC 258
                 D  ++ +V+ A A+   + LG ++           GF   + ++  L+  YSKC
Sbjct: 190 TN-VRPDEGTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKC 248

Query: 259 GEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLI 318
           G+VE A  LF  +   D++S N +I GYT     + +L LF+++L S E  N  T++ ++
Sbjct: 249 GDVETAFGLFEGLSCKDVVSWNTLIGGYTHTNLYKEALLLFQEMLRSGECPNDVTLLSVL 308

Query: 319 PVFYPFGHLHLTNCIHSFCLK--SGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKS 376
           P     G + +   IH +  K   G+ + +S+ T+L  +Y++  ++EAA ++F+    +S
Sbjct: 309 PACAHLGAIDIGRWIHVYIDKKLKGVTNETSLRTSLIDMYAKCGDIEAAHQVFNSMLYRS 368

Query: 377 LASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHE 436
           L+SWNAMI G+  +G    A  LF  M+ ++V P+ +T   +LSAC+  G + LG+ + +
Sbjct: 369 LSSWNAMIFGFAMHGRANAAFDLFSRMRGNRVEPDDITFVGLLSACSHSGLLDLGRQIFK 428

Query: 437 -LVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSE-VTWNTMISGYGLHGHG 494
            + +  N    +     +ID+    G   EA E+   M  + + V W +++     HG+ 
Sbjct: 429 SMTQDYNLTPKLEHYGCMIDLLGHSGLFKEAEEMIHTMPMEPDGVIWCSLLKACKKHGN- 487

Query: 495 LEALQLFSEML 505
           LE  + F++ L
Sbjct: 488 LELAESFAQKL 498



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 113/425 (26%), Positives = 199/425 (46%), Gaps = 48/425 (11%)

Query: 44  VTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTA 103
           +T  A R  DF++   AR +F  I + D+  +N +I G+  N   + ++  +  + + T 
Sbjct: 137 ITGYASR-GDFRS---ARKVFDEITERDVVSWNAMITGYVENGRYEEALELFKEMMR-TN 191

Query: 104 LTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVS----GYGSDLFVGAALVDLYFKFSWV 159
           + PD  T   V+SA +      +G  +H          G+ S L +  AL+DLY K   V
Sbjct: 192 VRPDEGTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKCGDV 251

Query: 160 KSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPA 219
           ++A  +F+ +  KD V WN++I G      +++++ +F +M+R+G    D T + +VLPA
Sbjct: 252 ETAFGLFEGLSCKDVVSWNTLIGGYTHTNLYKEALLLFQEMLRSGECPNDVT-LLSVLPA 310

Query: 220 VAEVQELRLGMEIQC-LGLKL-GFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLI 277
            A +  + +G  I   +  KL G  +   + T L+  Y+KCG++E A  +F  ++   L 
Sbjct: 311 CAHLGAIDIGRWIHVYIDKKLKGVTNETSLRTSLIDMYAKCGDIEAAHQVFNSMLYRSLS 370

Query: 278 SCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFC 337
           S NAMI G+  +G+  ++  LF ++  +    +  T VGL           L+ C HS  
Sbjct: 371 SWNAMIFGFAMHGRANAAFDLFSRMRGNRVEPDDITFVGL-----------LSACSHSGL 419

Query: 338 LKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAI 397
           L  G      +  +++  Y+   ++E                +  MI     +GL +EA 
Sbjct: 420 LDLG----RQIFKSMTQDYNLTPKLE---------------HYGCMIDLLGHSGLFKEAE 460

Query: 398 SLFQEMQASKVAPNPVTVSSILSACAQLGAISLGK-WVHELVKSRNFESNIYVSTALIDM 456
            +   M    + P+ V   S+L AC + G + L + +  +L+K     S  YV   L ++
Sbjct: 461 EMIHTM---PMEPDGVIWCSLLKACKKHGNLELAESFAQKLIKIEPENSGSYV--LLSNI 515

Query: 457 YAKCG 461
           YA  G
Sbjct: 516 YATAG 520



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 78/289 (26%), Positives = 130/289 (44%), Gaps = 38/289 (13%)

Query: 349 LTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKV 408
           L  L  V    + +  A  +F+   E +L  WN M+ G+  +     A+ ++  M +   
Sbjct: 1   LLELCVVSPHFDGLPYAISVFETIQEPNLLIWNTMLRGHASSSDPVSALEMYVRMVSLGH 60

Query: 409 APNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARE 468
            PN  +   +L +CA+  A   G+ +H  V       + YV T+LI MYA+ G + +AR+
Sbjct: 61  LPNSYSFPFLLKSCAKSKAFEEGRQIHAQVLKLGCGLDRYVHTSLISMYARNGGLEDARK 120

Query: 469 LFDLMSH-------------------------------KSEVTWNTMISGYGLHGHGLEA 497
           +FD  SH                               +  V+WN MI+GY  +G   EA
Sbjct: 121 VFDASSHRDVVSCTALITGYASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEA 180

Query: 498 LQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEI---FQSMIHDHGFKPLAEHYAC 554
           L+LF EM+ + +RP   T +SV+ AC+ +G +  G ++         DHGF    +    
Sbjct: 181 LELFKEMMRTNVRPDEGTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNA 240

Query: 555 MVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVA 603
           ++D+  + G +E A    +GL+ +     W  L+G    +  TNL + A
Sbjct: 241 LIDLYSKCGDVETAFGLFEGLSCKD-VVSWNTLIGG---YTHTNLYKEA 285


>gi|225438894|ref|XP_002279137.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
           chloroplastic-like [Vitis vinifera]
          Length = 628

 Score =  486 bits (1250), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 248/583 (42%), Positives = 345/583 (59%), Gaps = 29/583 (4%)

Query: 230 MEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCN 289
           ++I  +  + G   H  +   L   Y+  G ++ +  LF     P +    A+I G+   
Sbjct: 47  LQIHAVLFRHGLDHHPILNFKLQRSYASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALR 106

Query: 290 GKTESSLRLFRQLLASAERVNS---STIVGLIPVFYPFGHLH--------------LTNC 332
           G  E +L  + Q+L      N+   S+I+ L P+  P   LH               T  
Sbjct: 107 GLHEQALNFYAQMLTQGVEPNAFTFSSILKLCPI-EPGKALHSQAVKLGFDSDLYVRTGL 165

Query: 333 IHSFCLKSGIVSNSSV-----------LTALSTVYSRLNEMEAARKLFDESSEKSLASWN 381
           +  +     +VS   +           LTA+ T Y++  E++AAR LFD   E+    WN
Sbjct: 166 LDVYARGGDVVSAQQLFDTMPEKSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWN 225

Query: 382 AMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSR 441
            MI GYTQNG+  EA+ LF+ M  +K  PN VTV S+LSAC QLGA+  G+WVH  +++ 
Sbjct: 226 VMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENN 285

Query: 442 NFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLF 501
             + N++V TAL+DMY+KCG++ +AR +FD +  K  V WN+MI GY +HG   EALQLF
Sbjct: 286 GIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMHGFSQEALQLF 345

Query: 502 SEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGR 561
             M   G+ P+ +TF+ +L AC H+G V EG +IF  M  ++G +P  EHY CMV++LGR
Sbjct: 346 KSMCRMGLHPTNITFIGILSACGHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNLLGR 405

Query: 562 AGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLL 621
           AG +E+A E +K + +EP P +WG LLGAC +H    L     E L + +  N G ++LL
Sbjct: 406 AGHVEQAYELVKNMNIEPDPVLWGTLLGACRLHGKIALGEKIVELLVDQNLANSGTYILL 465

Query: 622 SNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAML 681
           SNIY+A  ++   A +R ++K   + K PGC+ IEV    H F +G   HP+   IY ML
Sbjct: 466 SNIYAAVGNWDGVARLRTMMKDSGVKKEPGCSSIEVNNKVHEFLAGGLNHPKRKEIYMML 525

Query: 682 EKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNL 741
           E++NG ++  G+  +T   LHD+ E EKE  ++VHSEKLAIAFGLI T+PGT I+I+KNL
Sbjct: 526 EEINGWLKSHGYTPQTDIVLHDIGETEKERSLEVHSEKLAIAFGLINTQPGTTIKIVKNL 585

Query: 742 RVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           RVC DCH  TK ISK+TGR IVVRD NRFHHF  G CSCGDYW
Sbjct: 586 RVCADCHEVTKLISKITGRKIVVRDRNRFHHFVNGSCSCGDYW 628



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 132/488 (27%), Positives = 213/488 (43%), Gaps = 75/488 (15%)

Query: 8   SRNLFLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSI 67
           S N    L+  +KT S L Q HA +  HG  +      KL    +      Y+ ALF   
Sbjct: 29  STNRLAVLIDKSKTISHLLQIHAVLFRHGLDHHPILNFKLQRSYASLGRLDYSVALFGRT 88

Query: 68  PKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIG 127
             P +F +  II G +   + + ++ FY  +     + P+ FT+S +L      C    G
Sbjct: 89  QNPSVFFWTAIIHGHALRGLHEQALNFYAQMLTQ-GVEPNAFTFSSILK----LCPIEPG 143

Query: 128 VLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEK--------------- 172
             LH  A+  G+ SDL+V   L+D+Y +   V SA+++FD MPEK               
Sbjct: 144 KALHSQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQLFDTMPEKSLVSLTAMLTCYAKH 203

Query: 173 ----------------DTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAV 216
                           D V WN MI G  +N    +++ +F  M++      +  +V +V
Sbjct: 204 GELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKAK-PNEVTVLSV 262

Query: 217 LPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDL 276
           L A  ++  L  G  +       G   +V+V T LV  YSKCG +E A L+F  I   D+
Sbjct: 263 LSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKDV 322

Query: 277 ISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSF 336
           ++ N+MI GY  +G ++ +L+LF+ +        + T +G+           L+ C HS 
Sbjct: 323 VAWNSMIVGYAMHGFSQEALQLFKSMCRMGLHPTNITFIGI-----------LSACGHSG 371

Query: 337 CLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESS-EKSLASWNAMIAGYTQNGLTEE 395
            +  G              +   N+M+      DE   E  +  +  M+    + G  E+
Sbjct: 372 WVTEG--------------WDIFNKMK------DEYGIEPKIEHYGCMVNLLGRAGHVEQ 411

Query: 396 AISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNF-ESNIYVSTALI 454
           A  L + M    + P+PV   ++L AC   G I+LG+ + EL+  +N   S  Y+   L 
Sbjct: 412 AYELVKNMN---IEPDPVLWGTLLGACRLHGKIALGEKIVELLVDQNLANSGTYI--LLS 466

Query: 455 DMYAKCGN 462
           ++YA  GN
Sbjct: 467 NIYAAVGN 474


>gi|449497733|ref|XP_004160501.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
            protein At4g13650-like [Cucumis sativus]
          Length = 1037

 Score =  485 bits (1248), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 275/776 (35%), Positives = 437/776 (56%), Gaps = 6/776 (0%)

Query: 13   LSLLKGAKTQSQL----TQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIP 68
            LS +  A T+ QL     Q H  +I  GF ++      L    S  +    A  +F ++ 
Sbjct: 264  LSSVLSASTKIQLFELGEQLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMN 323

Query: 69   KPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGV 128
              D   +N +I G         ++  +T ++++  L PD  T + +LSA ++      G+
Sbjct: 324  SRDGVSYNSLISGLVQQGFSDRALELFTKMQRD-CLKPDCITVASLLSACASVGALHKGM 382

Query: 129  LLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNC 188
             LH HAI +G  +D+ +  +L+DLY K + V++A K F     ++ VLWN M+    +  
Sbjct: 383  QLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLXTETENIVLWNVMLVAYGQLD 442

Query: 189  CFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVL 248
               DS  +F  M +  G   +  +  ++L     +  L LG +I    +K GF  +VYV 
Sbjct: 443  NLSDSFEIFRQM-QMEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVC 501

Query: 249  TGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAER 308
            + L+  Y+K G++  A  + R +   D++S  AMI+GY  +     +L+LF ++     +
Sbjct: 502  SVLIDMYAKYGQLALALRILRRLPEDDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQ 561

Query: 309  VNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKL 368
             ++      I        L     IH+    +G  ++ S+  AL ++Y+R   ++ A   
Sbjct: 562  FDNIGFASAISACAGIRALRQGQQIHAQSYAAGFGADLSINNALISLYARCGRIQEAYLA 621

Query: 369  FDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAI 428
            F++  +K+  SWN++++G  Q+G  EEA+ +F  M  ++   N  T  S +SA A L  I
Sbjct: 622  FEKIGDKNNISWNSLVSGLAQSGYFEEALQVFVRMLRTEAEVNMFTYGSAISAAASLANI 681

Query: 429  SLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGY 488
              G+ +H +V    ++S   VS +LI +YAK G+I +A   F+ MS ++ ++WN MI+GY
Sbjct: 682  KQGQQIHSMVLKTGYDSEREVSNSLISLYAKSGSISDAWREFNDMSERNVISWNAMITGY 741

Query: 489  GLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPL 548
              HG G+EAL+LF EM   GI P+ VTF+ VL ACSH GLV+EG + F+SM   H   P 
Sbjct: 742  SQHGCGMEALRLFEEMKVCGIMPNHVTFVGVLSACSHIGLVKEGLDYFESMFKIHDLVPK 801

Query: 549  AEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLF 608
            +EHY C+VD+LGRAGQL++A+E+IK + +     +W  LL AC+IHK+  +   A+  L 
Sbjct: 802  SEHYVCVVDLLGRAGQLDRAMEYIKEMPIPADAMIWRTLLSACVIHKNIEIGERAAHHLL 861

Query: 609  ELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGD 668
            EL+PE+   +VL+SNIY+  R ++     R+++K   + K PG + IEV    H F +GD
Sbjct: 862  ELEPEDSATYVLISNIYAVSRQWIHRDWSRKLMKDXGVKKEPGRSWIEVKNAVHAFYAGD 921

Query: 669  QLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIA 728
            +LHP +  IY  +  LN +  E G+  ++ + L++ E+ +K+ +  VHSEKLAIAFGL++
Sbjct: 922  KLHPLTNQIYEYIGHLNRRTSEIGYVQDSFSLLNESEQGQKDPITHVHSEKLAIAFGLLS 981

Query: 729  TEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
                  IR++KNLRVC DCH   K++SK++ R I+VRDA+RFHHF GGVCSC D+W
Sbjct: 982  LGNNIPIRVMKNLRVCNDCHNWIKYVSKISNRSIIVRDAHRFHHFDGGVCSCKDFW 1037



 Score =  251 bits (640), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 167/564 (29%), Positives = 278/564 (49%), Gaps = 13/564 (2%)

Query: 12  FLSLLKGAKTQSQLTQT---HAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIP 68
           +L LL+G  T   L +T   H +I   GF  +   +  L            A  +F    
Sbjct: 61  YLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDNYFRHGDQHGAVKVFDENS 120

Query: 69  KPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGV 128
              +F +N +I  F   +      C +  +     +TP+ +T++ VL A   C    I  
Sbjct: 121 NRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAE-GITPNGYTFAGVLKA---CVGGDIAF 176

Query: 129 ----LLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGL 184
                +H      G+ S   V   L+DLY K  +++SA+KVF+ +  KD V W +MISGL
Sbjct: 177 NYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCICMKDIVTWVAMISGL 236

Query: 185 MKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDH 244
            +N   +++I +F DM      +     +++VL A  ++Q   LG ++ CL +K GFH  
Sbjct: 237 SQNGLEEEAILLFCDM-HASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLVIKWGFHSE 295

Query: 245 VYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLA 304
            YV  GLV+ YS+  ++  AE +F  +   D +S N++ISG    G ++ +L LF ++  
Sbjct: 296 TYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALELFTKMQR 355

Query: 305 SAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEA 364
              + +  T+  L+      G LH    +HS  +K+G+ ++  +  +L  +YS+  ++E 
Sbjct: 356 DCLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVET 415

Query: 365 ARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQ 424
           A K F  +  +++  WN M+  Y Q     ++  +F++MQ   + PN  T  SIL  C  
Sbjct: 416 AHKFFLXTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTS 475

Query: 425 LGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTM 484
           LGA+ LG+ +H  V    F+ N+YV + LIDMYAK G +  A  +   +     V+W  M
Sbjct: 476 LGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDVVSWTAM 535

Query: 485 ISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHG 544
           I+GY  H    EALQLF EM + GI+   + F S + AC+    +R+G +I  +  +  G
Sbjct: 536 IAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQI-HAQSYAAG 594

Query: 545 FKPLAEHYACMVDILGRAGQLEKA 568
           F         ++ +  R G++++A
Sbjct: 595 FGADLSINNALISLYARCGRIQEA 618



 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 106/368 (28%), Positives = 176/368 (47%), Gaps = 15/368 (4%)

Query: 230 MEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCN 289
           M + C   K GF     ++  LV  Y + G+   A  +F +     + S N MI  +   
Sbjct: 78  MRLHCRISKSGFDGEPLLIDSLVDNYFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQ 137

Query: 290 GKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFG-HLHLTNCIHSFCLKSGIVSNSSV 348
                   LFR++LA     N  T  G++          +    +HS     G  S+  V
Sbjct: 138 KSNFQVFCLFRRMLAEGITPNGYTFAGVLKACVGGDIAFNYVKQVHSRTFYYGFDSSPLV 197

Query: 349 LTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKV 408
              L  +YS+   +E+A+K+F+    K + +W AMI+G +QNGL EEAI LF +M AS++
Sbjct: 198 ANLLIDLYSKNGYIESAKKVFNCICMKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEI 257

Query: 409 APNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARE 468
            P P  +SS+LSA  ++    LG+ +H LV    F S  YV   L+ +Y++   ++ A  
Sbjct: 258 FPTPYVLSSVLSASTKIQLFELGEQLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAER 317

Query: 469 LFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGL 528
           +F  M+ +  V++N++ISG    G    AL+LF++M    ++P  +T  S+L AC+  G 
Sbjct: 318 IFSTMNSRDGVSYNSLISGLVQQGFSDRALELFTKMQRDCLKPDCITVASLLSACASVGA 377

Query: 529 VREGDEIFQSMIHDHGFKP------LAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPA 582
           + +G +     +H H  K       + E    ++D+  +   +E A +F      E    
Sbjct: 378 LHKGMQ-----LHSHAIKAGMSADIILE--GSLLDLYSKCADVETAHKFFLXTETE-NIV 429

Query: 583 VWGALLGA 590
           +W  +L A
Sbjct: 430 LWNVMLVA 437



 Score =  105 bits (263), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 84/265 (31%), Positives = 127/265 (47%), Gaps = 8/265 (3%)

Query: 308 RVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARK 367
           R N    + L+      G L  T  +H    KSG      ++ +L   Y R  +   A K
Sbjct: 55  RSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDNYFRHGDQHGAVK 114

Query: 368 LFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGA 427
           +FDE+S +S+ SWN MI  +       +   LF+ M A  + PN  T + +L AC   G 
Sbjct: 115 VFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTFAGVLKACVG-GD 173

Query: 428 ISLG--KWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMI 485
           I+    K VH       F+S+  V+  LID+Y+K G I  A+++F+ +  K  VTW  MI
Sbjct: 174 IAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCICMKDIVTWVAMI 233

Query: 486 SGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGF 545
           SG   +G   EA+ LF +M  S I P+     SVL A +   L   G+++   ++   GF
Sbjct: 234 SGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQL-HCLVIKWGF 292

Query: 546 KPLAEHYAC--MVDILGRAGQLEKA 568
              +E Y C  +V +  R+ +L  A
Sbjct: 293 H--SETYVCNGLVALYSRSRKLISA 315



 Score = 60.1 bits (144), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 46/174 (26%), Positives = 75/174 (43%), Gaps = 4/174 (2%)

Query: 397 ISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDM 456
           I L   M+   V  N      +L  C   G++     +H  +    F+    +  +L+D 
Sbjct: 43  IQLMNFMEERGVRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDN 102

Query: 457 YAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTF 516
           Y + G+   A ++FD  S++S  +WN MI  +       +   LF  ML  GI P+G TF
Sbjct: 103 YFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTF 162

Query: 517 LSVLYACSHAGLVREGDEIFQSMIHDHGFK--PLAEHYACMVDILGRAGQLEKA 568
             VL AC    +     +   S    +GF   PL  +   ++D+  + G +E A
Sbjct: 163 AGVLKACVGGDIAFNYVKQVHSRTFYYGFDSSPLVAN--LLIDLYSKNGYIESA 214


>gi|297743367|emb|CBI36234.3| unnamed protein product [Vitis vinifera]
          Length = 906

 Score =  485 bits (1248), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 274/748 (36%), Positives = 420/748 (56%), Gaps = 13/748 (1%)

Query: 43  TVTKLAHRLSDFKATCYAR--------ALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICF 94
           TVT+L  RL +   + + R         +F  + + DLF +NV++ G++       ++  
Sbjct: 123 TVTRLGVRLGNALLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNL 182

Query: 95  YTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYF 154
           Y H      + PD +T+  VL       D + G  +H H I  G+ SD+ V  AL+ +Y 
Sbjct: 183 Y-HRMLWVGIRPDVYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYV 241

Query: 155 KFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVA 214
           K   + SAR VFD+MP +D + WN+MISG  +N    + + +F  M+R      D  ++ 
Sbjct: 242 KCGDIFSARLVFDRMPRRDRISWNAMISGYFENDVCLEGLRLFF-MMREFFVDPDLMTMT 300

Query: 215 AVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRP 274
           +V+ A   + + RLG E+    +K GF   V V   L+  +S  G  + AE++F  +   
Sbjct: 301 SVISACEALGDERLGREVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFK 360

Query: 275 DLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIH 334
           DL+S  AMISGY  NG  E ++  +  +       +  TI  ++      G L     +H
Sbjct: 361 DLVSWTAMISGYEKNGLPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGLLDKGIMLH 420

Query: 335 SFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTE 394
            F  ++G+ S   V  +L  +YS+   ++ A ++F     K++ SW ++I G   N  + 
Sbjct: 421 EFADRTGLTSYVIVANSLIDMYSKCRCIDKALEVFHRIPNKNVISWTSIILGLRLNYRSF 480

Query: 395 EAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALI 454
           EA+  FQ+M  S + PN VT+ S+LSACA++GA+S GK +H          + ++  AL+
Sbjct: 481 EALFFFQQMILS-LKPNSVTLVSVLSACARIGALSCGKEIHAHALRTGLGFDGFLPNALL 539

Query: 455 DMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGV 514
           DMY +CG +  A   F+    K   +WN +++GY   G G  A++LF +M+ S + P  +
Sbjct: 540 DMYVRCGRMEPAWNQFN-SCEKDVASWNILLTGYAQQGKGGLAVELFHKMIESDVNPDEI 598

Query: 515 TFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKG 574
           TF S+L ACS +G+V +G E F+SM H     P  +HYA +VD+LGRAG+LE A EFIK 
Sbjct: 599 TFTSLLCACSRSGMVTDGLEYFESMEHKFHIAPNLKHYASVVDLLGRAGRLEDAYEFIKK 658

Query: 575 LAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQA 634
           + ++P PA+WGALL AC I+++  L  +A++ +FE+D ++VGY++LL N+Y+    + + 
Sbjct: 659 MPIDPDPAIWGALLNACRIYQNVELGELAAQHIFEMDTKSVGYYILLCNLYADSGKWDEV 718

Query: 635 ATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQ 694
           A VR+++++ +L   PGC+ +EV G  H F +GD  HPQ   I A+LE    KM   G  
Sbjct: 719 ARVRKIMRENRLTVDPGCSWVEVAGQVHAFLTGDDFHPQIKEINAVLEGFYEKMEATGLS 778

Query: 695 TETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFI 754
               +   D++  + E+    HSE+LAIAFGLI T PGT I + KNL +C +CH   KFI
Sbjct: 779 MSKDSRRDDIDASKAEIFCG-HSERLAIAFGLINTVPGTPIWVTKNLYMCENCHNTVKFI 837

Query: 755 SKVTGRVIVVRDANRFHHFKGGVCSCGD 782
           SKV  R I VRD  +FHHFK GVCSCGD
Sbjct: 838 SKVVRRGISVRDTEQFHHFKDGVCSCGD 865



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 70/203 (34%), Positives = 109/203 (53%)

Query: 333 IHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGL 392
           +HS+  K+       +  AL +++ R  ++  A  +F + +E+ L SWN ++ GY + G 
Sbjct: 116 VHSYVSKTVTRLGVRLGNALLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGY 175

Query: 393 TEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTA 452
            +EA++L+  M    + P+  T   +L  C  L  ++ G+ VH  V    FES++ V  A
Sbjct: 176 FDEALNLYHRMLWVGIRPDVYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNA 235

Query: 453 LIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPS 512
           LI MY KCG+I  AR +FD M  +  ++WN MISGY  +   LE L+LF  M    + P 
Sbjct: 236 LITMYVKCGDIFSARLVFDRMPRRDRISWNAMISGYFENDVCLEGLRLFFMMREFFVDPD 295

Query: 513 GVTFLSVLYACSHAGLVREGDEI 535
            +T  SV+ AC   G  R G E+
Sbjct: 296 LMTMTSVISACEALGDERLGREV 318



 Score = 79.0 bits (193), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 53/188 (28%), Positives = 87/188 (46%), Gaps = 1/188 (0%)

Query: 381 NAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKS 440
           N++I      G  E+A+     MQ  +V+    T  ++L  C    A S G  VH  V  
Sbjct: 63  NSLILELCLKGDLEKALIHLDSMQELQVSVEEETYIALLRLCEWKRAASEGSRVHSYVSK 122

Query: 441 RNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQL 500
                 + +  AL+ M+ + G++VEA  +F  M+ +   +WN ++ GY   G+  EAL L
Sbjct: 123 TVTRLGVRLGNALLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNL 182

Query: 501 FSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILG 560
           +  ML  GIRP   TF  VL  C     +  G E+   +I  +GF+   +    ++ +  
Sbjct: 183 YHRMLWVGIRPDVYTFPCVLRTCGGLPDLARGREVHLHVIR-YGFESDVDVVNALITMYV 241

Query: 561 RAGQLEKA 568
           + G +  A
Sbjct: 242 KCGDIFSA 249


>gi|449497589|ref|XP_004160443.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Cucumis sativus]
          Length = 776

 Score =  485 bits (1248), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 271/741 (36%), Positives = 416/741 (56%), Gaps = 40/741 (5%)

Query: 66  SIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRS 125
           +I   D+  +N  I  +      +S++  +  +R+ + +T  N   S  LS     C R 
Sbjct: 54  TIVDSDIVKWNRKISAYMRKGQCESALSVFNGMRRRSTVTY-NAMISGYLSNNKFDCARK 112

Query: 126 IGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLM 185
           +   +           DL     ++  Y K   + +AR +F++MPEKD V WN+M+SG  
Sbjct: 113 VFEKMPDR--------DLISWNVMLSGYVKNGNLSAARALFNQMPEKDVVSWNAMLSGFA 164

Query: 186 KNCCFQDSIWVFGDM-VRNGGTWLDSTSVAAVLPAVAEVQEL---RLGMEIQCLGLKLGF 241
           +N   +++  +F  M V+N  +W    S       + + + L   ++  EI      +G 
Sbjct: 165 QNGFVEEARKIFDQMLVKNEISWNGLLSAYVQNGRIEDARRLFDSKMDWEIVSWNCLMGG 224

Query: 242 H-------------DHVYVLTG-----LVSFYSKCGEVERAELLFRDIVRPDLISCNAMI 283
           +             D + V        +++ Y++ G +  A  LF ++   D+ +  AM+
Sbjct: 225 YVRKKRLDDARSLFDRMPVRDKISWNIMITGYAQNGLLSEARRLFEELPIRDVFAWTAMV 284

Query: 284 SGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIV 343
           SG+  NG  + + R+F ++    E   ++ I G +          L + + S        
Sbjct: 285 SGFVQNGMLDEATRIFEEMPEKNEVSWNAMIAGYVQSQQIEKARELFDQMPS-------- 336

Query: 344 SNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEM 403
            N+S    + T Y++   ++ A+ LFDE  ++   SW AMI+GY Q+G +EEA+ LF +M
Sbjct: 337 RNTSSWNTMVTGYAQCGNIDQAKILFDEMPQRDCISWAAMISGYAQSGQSEEALHLFIKM 396

Query: 404 QASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNI 463
           +      N   ++  LS+CA++ A+ LGK +H  +    F++      AL+ MY KCG+I
Sbjct: 397 KRDGGILNRSALACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSI 456

Query: 464 VEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYAC 523
            EA ++F+ ++ K  V+WNTMI+GY  HG G EAL LF  M  + I+P  VT + VL AC
Sbjct: 457 EEAFDVFEDITEKDIVSWNTMIAGYARHGFGKEALALFESMKMT-IKPDDVTLVGVLSAC 515

Query: 524 SHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAV 583
           SH GLV +G E F SM  ++G    A+HY CM+D+LGRAG+L++AL  +K +   P  A 
Sbjct: 516 SHTGLVDKGMEYFNSMYQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAAT 575

Query: 584 WGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKK 643
           WGALLGA  IH DT L   A+EK+FE++P+N G +VLLSN+Y+A   + +   +R  ++ 
Sbjct: 576 WGALLGASRIHGDTELGEKAAEKVFEMEPDNSGMYVLLSNLYAASGRWREVREMRSKMRD 635

Query: 644 RKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHD 703
           + + K PG + +E+    H+FT GD  HP++  IYA LE+L+ ++++ GF + T   LHD
Sbjct: 636 KGVKKVPGYSWVEIQNKTHIFTVGDCSHPEAERIYAYLEELDLELKKDGFVSSTKLVLHD 695

Query: 704 VEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIV 763
           VEEEEKE M+K HSEKLA+AFG+++  PG  IR+IKNLRVC DCH A K ISK+T R I+
Sbjct: 696 VEEEEKEHMLKYHSEKLAVAFGILSIPPGRPIRVIKNLRVCEDCHNAIKHISKITQRQII 755

Query: 764 VRDANRFHHFKGGVCSCGDYW 784
           VRD+NRFHHF  G CSCGDYW
Sbjct: 756 VRDSNRFHHFSEGSCSCGDYW 776



 Score =  166 bits (420), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 130/521 (24%), Positives = 247/521 (47%), Gaps = 52/521 (9%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFV----L 115
           ARALF  +P+ D+  +N ++ GF+ N   + +   +  +     ++ +    ++V    +
Sbjct: 141 ARALFNQMPEKDVVSWNAMLSGFAQNGFVEEARKIFDQMLVKNEISWNGLLSAYVQNGRI 200

Query: 116 SAASACCDRSIGV-LLHGHAIVSGY--------GSDLFVGAALVDLYFKFSW-------- 158
             A    D  +   ++  + ++ GY           LF    + D   K SW        
Sbjct: 201 EDARRLFDSKMDWEIVSWNCLMGGYVRKKRLDDARSLFDRMPVRD---KISWNIMITGYA 257

Query: 159 ----VKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVA 214
               +  AR++F+++P +D   W +M+SG ++N    ++  +F +M        +  S  
Sbjct: 258 QNGLLSEARRLFEELPIRDVFAWTAMVSGFVQNGMLDEATRIFEEMPEK-----NEVSWN 312

Query: 215 AVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRP 274
           A++    + Q++    E+           +      +V+ Y++CG +++A++LF ++ + 
Sbjct: 313 AMIAGYVQSQQIEKAREL----FDQMPSRNTSSWNTMVTGYAQCGNIDQAKILFDEMPQR 368

Query: 275 DLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIH 334
           D IS  AMISGY  +G++E +L LF ++      +N S +   +        L L   +H
Sbjct: 369 DCISWAAMISGYAQSGQSEEALHLFIKMKRDGGILNRSALACALSSCAEIAALELGKQLH 428

Query: 335 SFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTE 394
              +K+G  +      AL  +Y +   +E A  +F++ +EK + SWN MIAGY ++G  +
Sbjct: 429 GRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAGYARHGFGK 488

Query: 395 EAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLG-KWVHELVKSRNFESNIYVSTAL 453
           EA++LF+ M+ + + P+ VT+  +LSAC+  G +  G ++ + + ++    +N    T +
Sbjct: 489 EALALFESMKMT-IKPDDVTLVGVLSACSHTGLVDKGMEYFNSMYQNYGITANAKHYTCM 547

Query: 454 IDMYAKCGNIVEARELFDLMS-HKSEVTWNTMISGYGLHGH---GLEALQLFSEML--HS 507
           ID+  + G + EA  L   M  +    TW  ++    +HG    G +A +   EM   +S
Sbjct: 548 IDLLGRAGRLDEALNLMKSMPFYPDAATWGALLGASRIHGDTELGEKAAEKVFEMEPDNS 607

Query: 508 GIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPL 548
           G+       LS LYA S  G  RE  E+ +S + D G K +
Sbjct: 608 GM----YVLLSNLYAAS--GRWREVREM-RSKMRDKGVKKV 641


>gi|356511263|ref|XP_003524346.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Glycine max]
          Length = 763

 Score =  484 bits (1247), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 258/668 (38%), Positives = 379/668 (56%), Gaps = 36/668 (5%)

Query: 142 DLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMV 201
           DLF    ++  Y +   +  A K+FD MP+KD V WN+M+SG  +N    ++  VF  M 
Sbjct: 107 DLFSWNVMLTGYVRNRRLGEAHKLFDLMPKKDVVSWNAMLSGYAQNGFVDEAREVFNKMP 166

Query: 202 -RNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQC-------------------LGLKLGF 241
            RN  +W     + A       ++E R   E Q                    LG     
Sbjct: 167 HRNSISW---NGLLAAYVHNGRLKEARRLFESQSNWELISWNCLMGGYVKRNMLGDARQL 223

Query: 242 HDHVYV-----LTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSL 296
            D + V        ++S Y++ G++ +A+ LF +    D+ +  AM+SGY  NG  + + 
Sbjct: 224 FDRMPVRDVISWNTMISGYAQVGDLSQAKRLFNESPIRDVFTWTAMVSGYVQNGMVDEAR 283

Query: 297 RLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVY 356
           + F ++    E   ++ + G +         +    I     ++    N S    + T Y
Sbjct: 284 KYFDEMPVKNEISYNAMLAGYVQ--------YKKMVIAGELFEAMPCRNISSWNTMITGY 335

Query: 357 SRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVS 416
            +   +  ARKLFD   ++   SW A+I+GY QNG  EEA+++F EM+    + N  T S
Sbjct: 336 GQNGGIAQARKLFDMMPQRDCVSWAAIISGYAQNGHYEEALNMFVEMKRDGESSNRSTFS 395

Query: 417 SILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHK 476
             LS CA + A+ LGK VH  V    FE+  +V  AL+ MY KCG+  EA ++F+ +  K
Sbjct: 396 CALSTCADIAALELGKQVHGQVVKAGFETGCFVGNALLGMYFKCGSTDEANDVFEGIEEK 455

Query: 477 SEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIF 536
             V+WNTMI+GY  HG G +AL LF  M  +G++P  +T + VL ACSH+GL+  G E F
Sbjct: 456 DVVSWNTMIAGYARHGFGRQALVLFESMKKAGVKPDEITMVGVLSACSHSGLIDRGTEYF 515

Query: 537 QSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKD 596
            SM  D+  KP ++HY CM+D+LGRAG+LE+A   ++ +  +PG A WGALLGA  IH +
Sbjct: 516 YSMDRDYNVKPTSKHYTCMIDLLGRAGRLEEAENLMRNMPFDPGAASWGALLGASRIHGN 575

Query: 597 TNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIE 656
           T L   A+E +F+++P+N G +VLLSN+Y+A   ++    +R  +++  + K  G + +E
Sbjct: 576 TELGEKAAEMVFKMEPQNSGMYVLLSNLYAASGRWVDVGKMRSKMREAGVQKVTGYSWVE 635

Query: 657 VGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVH 716
           V    H F+ GD  HP+   IYA LE+L+ KMR  G+ + T   LHDVEEEEKE M+K H
Sbjct: 636 VQNKIHTFSVGDCFHPEKDRIYAFLEELDLKMRREGYVSSTKLVLHDVEEEEKEHMLKYH 695

Query: 717 SEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGG 776
           SEKLA+AFG++    G  IR++KNLRVC DCH A K ISK+ GR+I++RD++RFHHF  G
Sbjct: 696 SEKLAVAFGILTIPAGRPIRVMKNLRVCQDCHNAIKHISKIVGRLIILRDSHRFHHFSEG 755

Query: 777 VCSCGDYW 784
           +CSCGDYW
Sbjct: 756 ICSCGDYW 763



 Score =  106 bits (264), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 83/347 (23%), Positives = 154/347 (44%), Gaps = 32/347 (9%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFV----- 114
           A+ LF   P  D+F +  ++ G+  N M   +  ++  +     ++ +     +V     
Sbjct: 251 AKRLFNESPIRDVFTWTAMVSGYVQNGMVDEARKYFDEMPVKNEISYNAMLAGYVQYKKM 310

Query: 115 -----LSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKM 169
                L  A  C  R+I      + +++GYG +                +  ARK+FD M
Sbjct: 311 VIAGELFEAMPC--RNISSW---NTMITGYGQN--------------GGIAQARKLFDMM 351

Query: 170 PEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLG 229
           P++D V W ++ISG  +N  +++++ +F +M R+G +  + ++ +  L   A++  L LG
Sbjct: 352 PQRDCVSWAAIISGYAQNGHYEEALNMFVEMKRDGES-SNRSTFSCALSTCADIAALELG 410

Query: 230 MEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCN 289
            ++    +K GF    +V   L+  Y KCG  + A  +F  I   D++S N MI+GY  +
Sbjct: 411 KQVHGQVVKAGFETGCFVGNALLGMYFKCGSTDEANDVFEGIEEKDVVSWNTMIAGYARH 470

Query: 290 GKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHL-TNCIHSFCLKSGIVSNSSV 348
           G    +L LF  +  +  + +  T+VG++      G +   T   +S      +   S  
Sbjct: 471 GFGRQALVLFESMKKAGVKPDEITMVGVLSACSHSGLIDRGTEYFYSMDRDYNVKPTSKH 530

Query: 349 LTALSTVYSRLNEMEAARKLFDESS-EKSLASWNAMIAGYTQNGLTE 394
            T +  +  R   +E A  L      +   ASW A++     +G TE
Sbjct: 531 YTCMIDLLGRAGRLEEAENLMRNMPFDPGAASWGALLGASRIHGNTE 577



 Score =  102 bits (255), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 81/272 (29%), Positives = 132/272 (48%), Gaps = 23/272 (8%)

Query: 268 FRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHL 327
           F+D   PD+++ N  IS +  NG  +S+LR+F     S  R +S +   +I  +      
Sbjct: 41  FKD---PDIVTWNKAISSHMRNGHCDSALRVFN----SMPRRSSVSYNAMISGYLRNAKF 93

Query: 328 HLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGY 387
            L   +     +  + S + +LT     Y R   +  A KLFD   +K + SWNAM++GY
Sbjct: 94  SLARDLFDKMPERDLFSWNVMLTG----YVRNRRLGEAHKLFDLMPKKDVVSWNAMLSGY 149

Query: 388 TQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNI 447
            QNG  +EA  +F +M       N ++ + +L+A    G +   + + E     N+E  +
Sbjct: 150 AQNGFVDEAREVFNKMPHR----NSISWNGLLAAYVHNGRLKEARRLFE--SQSNWE--L 201

Query: 448 YVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHS 507
                L+  Y K   + +AR+LFD M  +  ++WNTMISGY   G   +A +LF+E   S
Sbjct: 202 ISWNCLMGGYVKRNMLGDARQLFDRMPVRDVISWNTMISGYAQVGDLSQAKRLFNE---S 258

Query: 508 GIRPSGVTFLSVLYACSHAGLVREGDEIFQSM 539
            IR    T+ +++      G+V E  + F  M
Sbjct: 259 PIRDV-FTWTAMVSGYVQNGMVDEARKYFDEM 289


>gi|125563252|gb|EAZ08632.1| hypothetical protein OsI_30906 [Oryza sativa Indica Group]
          Length = 755

 Score =  484 bits (1247), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 275/747 (36%), Positives = 416/747 (55%), Gaps = 34/747 (4%)

Query: 39  NDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFS-NNEMPKSSICFYTH 97
           N   T    A R++D      A  LF ++P+     +N ++ G+S N  +P ++  F   
Sbjct: 42  NKAITAHMRAGRVAD------AERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFRAI 95

Query: 98  LRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFS 157
            R      PDN++Y+ +L A +     +    L     V     D      ++  +    
Sbjct: 96  PR------PDNYSYNTLLHALAVSSSLADARGLFDEMPVR----DSVTYNVMISSHANHG 145

Query: 158 WVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVL 217
            V  AR  FD  PEKD V WN M++  ++N   +++  +F     N  T  D+ S  A++
Sbjct: 146 LVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLF-----NSRTEWDAISWNALM 200

Query: 218 PAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLI 277
               +  ++    E + L  ++   D V     +VS Y++ G++  A  LF      D+ 
Sbjct: 201 SGYVQWGKMS---EARELFDRMPGRD-VVSWNIMVSGYARRGDMVEARRLFDAAPVRDVF 256

Query: 278 SCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFC 337
           +  A++SGY  NG  E + R+F    A  ER N+ +   ++  +     +     + +  
Sbjct: 257 TWTAVVSGYAQNGMLEEARRVFD---AMPER-NAVSWNAMVAAYIQRRMMDEAKELFNMM 312

Query: 338 LKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAI 397
               + S +++LT     Y++   +E A+ +FD   +K   SW AM+A Y+Q G +EE +
Sbjct: 313 PCRNVASWNTMLTG----YAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETL 368

Query: 398 SLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMY 457
            LF EM       N    + +LS CA + A+  G  +H  +    +    +V  AL+ MY
Sbjct: 369 QLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMY 428

Query: 458 AKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFL 517
            KCGN+ +AR  F+ M  +  V+WNTMI+GY  HG G EAL++F  M  +  +P  +T +
Sbjct: 429 FKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLV 488

Query: 518 SVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAV 577
            VL ACSH+GLV +G   F SM HD G     EHY CM+D+LGRAG+L +A + +K +  
Sbjct: 489 GVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPF 548

Query: 578 EPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATV 637
           EP   +WGALLGA  IH++  L R A+EK+FEL+PEN G +VLLSNIY++   +  A  +
Sbjct: 549 EPDSTMWGALLGASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYASSGKWRDARKM 608

Query: 638 RQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTET 697
           R ++++R + K PG + IEV    H F++GD +HP+   IYA LE L+ +M++AG+ + T
Sbjct: 609 RVMMEERGVKKVPGFSWIEVQNKVHTFSAGDCVHPEKEKIYAFLEDLDMRMKKAGYVSAT 668

Query: 698 VTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKV 757
              LHDVEEEEKE M+K HSEKLA+A+G++   PG  IR+IKNLRVC DCH A K+IS +
Sbjct: 669 DMVLHDVEEEEKEHMLKYHSEKLAVAYGILNIPPGRPIRVIKNLRVCGDCHNAFKYISAI 728

Query: 758 TGRVIVVRDANRFHHFKGGVCSCGDYW 784
            GR+I++RD+NRFHHF+GG CSCGDYW
Sbjct: 729 EGRLILLRDSNRFHHFRGGSCSCGDYW 755



 Score = 44.7 bits (104), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 30/124 (24%), Positives = 54/124 (43%), Gaps = 18/124 (14%)

Query: 443 FESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFS 502
            E  +  S   I  + + G + +A  LF  M  +S  T+N M++GY  +G     L L +
Sbjct: 34  LEPEVIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGR----LPLAA 89

Query: 503 EMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSM-IHD-------------HGFKPL 548
            +  +  RP   ++ ++L+A + +  + +   +F  M + D             HG   L
Sbjct: 90  SLFRAIPRPDNYSYNTLLHALAVSSSLADARGLFDEMPVRDSVTYNVMISSHANHGLVSL 149

Query: 549 AEHY 552
           A HY
Sbjct: 150 ARHY 153


>gi|147856409|emb|CAN80331.1| hypothetical protein VITISV_018275 [Vitis vinifera]
          Length = 681

 Score =  484 bits (1247), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 251/659 (38%), Positives = 391/659 (59%), Gaps = 2/659 (0%)

Query: 127 GVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMK 186
           G  LH   I +GY    F+   LV++Y K   +  A K+FD MP+++ V W +MISGL +
Sbjct: 24  GKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLFDTMPQRNLVSWTAMISGLSQ 83

Query: 187 NCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVY 246
           N  F ++I  F  M R  G      + ++ + A A +  + +G ++ CL LK G    ++
Sbjct: 84  NSKFSEAIRTFCGM-RICGEVPTQFAFSSAIRACASLGSIEMGKQMHCLALKFGIGSELF 142

Query: 247 VLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASA 306
           V + L   YSKCG +  A  +F ++   D +S  AMI GY+  G+ E +L  F++++   
Sbjct: 143 VGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDEE 202

Query: 307 ERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAAR 366
             ++   +   +              +HS  +K G  S+  V  AL+ +YS+  +ME+A 
Sbjct: 203 VTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESAS 262

Query: 367 KLFDESSE-KSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQL 425
            +F   SE +++ S+  +I GY +    E+ +S+F E++   + PN  T SS++ ACA  
Sbjct: 263 NVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQ 322

Query: 426 GAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMI 485
            A+  G  +H  V   NF+ + +VS+ L+DMY KCG +  A + FD +   +E+ WN+++
Sbjct: 323 AALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEHAIQAFDEIGDPTEIAWNSLV 382

Query: 486 SGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGF 545
           S +G HG G +A++ F  M+  G++P+ +TF+S+L  CSHAGLV EG + F SM   +G 
Sbjct: 383 SVFGQHGLGKDAIKFFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDYFYSMDKTYGV 442

Query: 546 KPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASE 605
            P  EHY+C++D+LGRAG+L++A EFI  +  EP    W + LGAC IH D  + ++A+E
Sbjct: 443 VPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFLGACRIHGDKEMGKLAAE 502

Query: 606 KLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFT 665
           KL +L+P+N G  VLLSNIY+ ER +    +VR  ++   + K PG + ++VG   HVF 
Sbjct: 503 KLVKLEPKNSGALVLLSNIYANERQWEDVRSVRMRMRDGNVKKLPGYSWVDVGYKTHVFG 562

Query: 666 SGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFG 725
           + D  H + +AIY  L+ L  +++ AG+   T +   D+++  KE ++  HSE++A+AF 
Sbjct: 563 AEDWSHXRKSAIYEKLDXLLDQIKAAGYVPXTDSVPLDMDDXMKEKLLHRHSERIAVAFA 622

Query: 726 LIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           LI+   G  I + KNLRVC+DCH+A KFISKVTGR I+VRD +RFHHF  G CSCGDYW
Sbjct: 623 LISMPIGKPIIVKKNLRVCVDCHSAIKFISKVTGRKIIVRDNSRFHHFTDGSCSCGDYW 681



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 118/382 (30%), Positives = 193/382 (50%), Gaps = 5/382 (1%)

Query: 209 DSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLF 268
           D+ ++A V+   A+ + LR G ++  L +  G+    ++   LV+ YSKCGE++ A  LF
Sbjct: 4   DTNALAHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLF 63

Query: 269 RDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLH 328
             + + +L+S  AMISG + N K   ++R F  +    E          I      G + 
Sbjct: 64  DTMPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIE 123

Query: 329 LTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYT 388
           +   +H   LK GI S   V + L  +YS+   M  A K+F+E   K   SW AMI GY+
Sbjct: 124 MGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYS 183

Query: 389 QNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIY 448
           + G  EEA+  F++M   +V  +   + S L AC  L A   G+ VH  V    FES+I+
Sbjct: 184 KIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIF 243

Query: 449 VSTALIDMYAKCGNIVEARELFDLMSH-KSEVTWNTMISGYGLHGHGLEALQLFSEMLHS 507
           V  AL DMY+K G++  A  +F + S  ++ V++  +I GY       + L +F E+   
Sbjct: 244 VGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQ 303

Query: 508 GIRPSGVTFLSVLYACSHAGLVREGDEIF-QSMIHDHGFKPLAEHYACMVDILGRAGQLE 566
           GI P+  TF S++ AC++   + +G ++  Q M  +    P     + +VD+ G+ G LE
Sbjct: 304 GIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVS--SILVDMYGKCGLLE 361

Query: 567 KALEFIKGLAVEPGPAVWGALL 588
            A++    +  +P    W +L+
Sbjct: 362 HAIQAFDEIG-DPTEIAWNSLV 382



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 126/473 (26%), Positives = 222/473 (46%), Gaps = 13/473 (2%)

Query: 27  QTHAQIIIHGFQNDLSTVTKLAHRLSDFKATC----YARALFFSIPKPDLFLFNVIIRGF 82
           Q HA +I  G+    +  T L + L +  + C    +A  LF ++P+ +L  +  +I G 
Sbjct: 26  QLHALLICAGY----TPCTFLTNHLVNMYSKCGELDHALKLFDTMPQRNLVSWTAMISGL 81

Query: 83  SNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSD 142
           S N     +I  +  +R      P  F +S  + A ++     +G  +H  A+  G GS+
Sbjct: 82  SQNSKFSEAIRTFCGMRI-CGEVPTQFAFSSAIRACASLGSIEMGKQMHCLALKFGIGSE 140

Query: 143 LFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVR 202
           LFVG+ L D+Y K   +  A KVF++MP KD V W +MI G  K   F++++  F  M+ 
Sbjct: 141 LFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEEALLAFKKMID 200

Query: 203 NGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVE 262
              T +D   + + L A   ++  + G  +    +KLGF   ++V   L   YSK G++E
Sbjct: 201 EEVT-IDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDME 259

Query: 263 RAELLFR-DIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVF 321
            A  +F  D    +++S   +I GY    + E  L +F +L       N  T   LI   
Sbjct: 260 SASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKAC 319

Query: 322 YPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWN 381
                L     +H+  +K     +  V + L  +Y +   +E A + FDE  + +  +WN
Sbjct: 320 ANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEHAIQAFDEIGDPTEIAWN 379

Query: 382 AMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLG-KWVHELVKS 440
           ++++ + Q+GL ++AI  F+ M    V PN +T  S+L+ C+  G +  G  + + + K+
Sbjct: 380 SLVSVFGQHGLGKDAIKFFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDYFYSMDKT 439

Query: 441 RNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEV-TWNTMISGYGLHG 492
                     + +ID+  + G + EA+E  + M  +     W + +    +HG
Sbjct: 440 YGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFLGACRIHG 492


>gi|6522552|emb|CAB61996.1| putative protein [Arabidopsis thaliana]
          Length = 1229

 Score =  484 bits (1246), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 253/657 (38%), Positives = 381/657 (57%), Gaps = 39/657 (5%)

Query: 130 LHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCC 189
           +H   I+     +  +G  L+  Y     V SARKVFD++PE++ ++ N MI   + N  
Sbjct: 61  VHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGF 120

Query: 190 FQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLT 249
           + + + VFG M        D  +   VL A +    + +G +I     K+G    ++V  
Sbjct: 121 YGEGVKVFGTMC-GCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGN 179

Query: 250 GLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERV 309
           GLVS Y KCG +  A L+  ++ R D++S N+++ GY  N + + +L + R++ +     
Sbjct: 180 GLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISH 239

Query: 310 NSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLF 369
           ++ T+  L+P                       VSN+   T  + +Y         + +F
Sbjct: 240 DAGTMASLLPA----------------------VSNT---TTENVMY--------VKDMF 266

Query: 370 DESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAIS 429
            +  +KSL SWN MI  Y +N +  EA+ L+  M+A    P+ V+++S+L AC    A+S
Sbjct: 267 FKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALS 326

Query: 430 LGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYG 489
           LGK +H  ++ +    N+ +  ALIDMYAKCG + +AR++F+ M  +  V+W  MIS YG
Sbjct: 327 LGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYG 386

Query: 490 LHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLA 549
             G G +A+ LFS++  SG+ P  + F++ L ACSHAGL+ EG   F+ M   +   P  
Sbjct: 387 FSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRL 446

Query: 550 EHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFE 609
           EH ACMVD+LGRAG++++A  FI+ +++EP   VWGALLGAC +H DT++  +A++KLF+
Sbjct: 447 EHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQ 506

Query: 610 LDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQ 669
           L PE  GY+VLLSNIY+    + +   +R ++K + L K PG + +EV    H F  GD+
Sbjct: 507 LAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDR 566

Query: 670 LHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIAT 729
            HPQS  IY  L+ L  KM+E G+  ++ +ALHDVEEE+KE  + VHSEKLAI F L+ T
Sbjct: 567 SHPQSDEIYRELDVLVKKMKELGYVPDSESALHDVEEEDKETHLAVHSEKLAIVFALMNT 626

Query: 730 EPGTE-----IRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCG 781
           +   E     IRI KNLR+C DCH A K IS++T R I++RD NRFH F+ GVCSC 
Sbjct: 627 KEEEEDSNNTIRITKNLRICGDCHVAAKLISQITSREIIIRDTNRFHVFRFGVCSCA 683



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 79/282 (28%), Positives = 129/282 (45%), Gaps = 6/282 (2%)

Query: 313 TIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDES 372
           T+  L  V   +  +     +HS  +   +  NSS+   L   Y+ L ++ +ARK+FDE 
Sbjct: 41  TVFLLGQVLDTYPDIRTLRTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEI 100

Query: 373 SEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGK 432
            E+++   N MI  Y  NG   E + +F  M    V P+  T   +L AC+  G I +G+
Sbjct: 101 PERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGR 160

Query: 433 WVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHG 492
            +H         S ++V   L+ MY KCG + EAR + D MS +  V+WN+++ GY  + 
Sbjct: 161 KIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQ 220

Query: 493 HGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHY 552
              +AL++  EM    I     T  S+L A S+     E     + M    G K L   +
Sbjct: 221 RFDDALEVCREMESVKISHDAGTMASLLPAVSNT--TTENVMYVKDMFFKMGKKSLVS-W 277

Query: 553 ACMVDILGRAGQLEKALEF---IKGLAVEPGPAVWGALLGAC 591
             M+ +  +     +A+E    ++    EP      ++L AC
Sbjct: 278 NVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPAC 319


>gi|297598430|ref|NP_001045574.2| Os01g0977400 [Oryza sativa Japonica Group]
 gi|255674132|dbj|BAF07488.2| Os01g0977400, partial [Oryza sativa Japonica Group]
          Length = 687

 Score =  484 bits (1246), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 265/682 (38%), Positives = 399/682 (58%), Gaps = 12/682 (1%)

Query: 104 LTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSAR 163
           + P+N+T+ F L A SA  D   G  +H HAI +G  +DLFV  AL+D+Y K + +  A 
Sbjct: 6   VAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAA 65

Query: 164 KVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDM-VRNGGTWLDSTSVAAVLPAVAE 222
            +F  MP +D V WN+M++G   +  +  ++     M ++      +++++ A+LP +A+
Sbjct: 66  HIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQ 125

Query: 223 VQELRLGMEIQCLGLKLGFH----------DHVYVLTGLVSFYSKCGEVERAELLFRDIV 272
              L  G  +    ++   H          D V + T L+  Y+KCG +  A  +F  + 
Sbjct: 126 QGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMP 185

Query: 273 RPDLISCNAMISGYTCNGKTESSLRLFRQLLASAE-RVNSSTIVGLIPVFYPFGHLHLTN 331
             + ++ +A+I G+    +   +  LF+ +LA     ++ ++I   +       HL +  
Sbjct: 186 ARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGE 245

Query: 332 CIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNG 391
            +H+   KSG+ ++ +   +L ++Y++   ++ A  LFDE + K   S++A+++GY QNG
Sbjct: 246 QLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNG 305

Query: 392 LTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVST 451
             EEA  +F++MQA  V P+  T+ S++ AC+ L A+  G+  H  V  R   S   +  
Sbjct: 306 RAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICN 365

Query: 452 ALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRP 511
           ALIDMYAKCG I  +R++F++M  +  V+WNTMI+GYG+HG G EA  LF EM + G  P
Sbjct: 366 ALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPP 425

Query: 512 SGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEF 571
            GVTF+ +L ACSH+GLV EG   F  M H +G  P  EHY CMVD+L R G L++A EF
Sbjct: 426 DGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEAYEF 485

Query: 572 IKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDY 631
           I+ + +     VW ALLGAC ++K+ +L +  S  + EL PE  G  VLLSNIYSA   +
Sbjct: 486 IQSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSAAGRF 545

Query: 632 LQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREA 691
            +AA VR + K +   K+PGC+ IE+ G+ H F  GDQ HPQS  IY  L+ +   +++ 
Sbjct: 546 DEAAEVRIIQKVQGFKKSPGCSWIEINGSLHAFVGGDQSHPQSPEIYRELDNILVGIKKL 605

Query: 692 GFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTAT 751
           G+Q +T   L D+EEEEKE  +  HSEKLAIA+G+++      I + KNLRVC DCHT  
Sbjct: 606 GYQPDTSFVLQDLEEEEKEKALICHSEKLAIAYGILSLSEDKTIFVTKNLRVCGDCHTVI 665

Query: 752 KFISKVTGRVIVVRDANRFHHF 773
           K IS V  R I+VRDANRFHHF
Sbjct: 666 KHISLVKRRAIIVRDANRFHHF 687



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 43/135 (31%), Positives = 69/135 (51%), Gaps = 2/135 (1%)

Query: 403 MQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGN 462
           M   +VAPN  T    L AC+ L     G+ +H        +++++VSTAL+DMY KC  
Sbjct: 1   MLRHRVAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCAC 60

Query: 463 IVEARELFDLMSHKSEVTWNTMISGYGLHG--HGLEALQLFSEMLHSGIRPSGVTFLSVL 520
           + +A  +F  M  +  V WN M++GY  HG  H   A  L  +M    +RP+  T +++L
Sbjct: 61  LPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALL 120

Query: 521 YACSHAGLVREGDEI 535
              +  G + +G  +
Sbjct: 121 PLLAQQGALAQGTSV 135



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 42/157 (26%), Positives = 71/157 (45%), Gaps = 1/157 (0%)

Query: 27  QTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNE 86
           Q HA +   G   DL+    L    +       A ALF  +   D   ++ ++ G+  N 
Sbjct: 246 QLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNG 305

Query: 87  MPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVG 146
             + +   +  ++    + PD  T   ++ A S       G   HG  I+ G  S+  + 
Sbjct: 306 RAEEAFLVFKKMQACN-VEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSIC 364

Query: 147 AALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISG 183
            AL+D+Y K   +  +R+VF+ MP +D V WN+MI+G
Sbjct: 365 NALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAG 401


>gi|357142905|ref|XP_003572732.1| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
           mitochondrial-like [Brachypodium distachyon]
          Length = 669

 Score =  484 bits (1246), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 246/563 (43%), Positives = 355/563 (63%), Gaps = 8/563 (1%)

Query: 229 GMEIQCLGLKLG-FHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYT 287
           G ++  L ++ G F    +  + L+  Y+ C     A   F +I  P+ +   AM SGY 
Sbjct: 108 GRQLHLLAIRSGLFPSDPFSASALLHMYNHCSRPIDARKAFDEIPSPNPVIITAMASGYV 167

Query: 288 CNGKTESSLRLFRQLLAS--AERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSN 345
            N     SL LFR+L+AS  A  V+ +  +             +T+ +H+  +K+G+  +
Sbjct: 168 RNNLVYPSLALFRKLIASGSATAVDEAAALVAFSASARIPDCGITSSLHALVVKTGLDGD 227

Query: 346 SSVLTALSTVYSR--LNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEM 403
           + V+  +   Y++    ++ AARK+FD + EK + SWN+MIA Y QNG++ +A+ L+++M
Sbjct: 228 AGVVNTMLDAYAKGGRRDLGAARKVFD-TMEKDVVSWNSMIALYAQNGMSADALGLYRKM 286

Query: 404 --QASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCG 461
              +  +  N VT+S+IL ACA  G I  GK +H  V     E N+YV T+++DMY+KCG
Sbjct: 287 LNVSGSIKCNAVTLSAILLACAHAGTIQTGKCIHNQVVRMGLEENVYVGTSVVDMYSKCG 346

Query: 462 NIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLY 521
            +  AR+ F  +  K+ ++W+ MI+GYG+HGHG EAL +F+EM  SG  P+ +TF+SVL 
Sbjct: 347 RVEMARKAFQKIKEKNILSWSAMITGYGMHGHGQEALDIFNEMCRSGQNPNYITFISVLA 406

Query: 522 ACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGP 581
           ACSHAGL+ +G   + +M    G +P  EHY CMVD+LGRAG L++A   IK + V+P  
Sbjct: 407 ACSHAGLLDKGRYWYNAMKKRFGIEPGVEHYGCMVDLLGRAGCLDEAYGLIKEMKVKPDA 466

Query: 582 AVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVV 641
           A+WGALL AC IHK+  LA +++++LFELD  N GY+VLLSNIY+    +     +R +V
Sbjct: 467 AIWGALLSACRIHKNVELAEISAKRLFELDATNCGYYVLLSNIYAEAGMWKDVERMRVLV 526

Query: 642 KKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTAL 701
           K R + K PG + +E+ G  H+F  GD+ HPQ   IY+ L KL  KM+EAG+   T + L
Sbjct: 527 KTRGIEKPPGYSSVELKGRTHLFYVGDKSHPQHKEIYSYLGKLLEKMQEAGYVPNTGSVL 586

Query: 702 HDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRV 761
           HD++EEEK   + +HSEKLAIAF L+ + PG+ I +IKNLRVC DCHTA K I+K+  R 
Sbjct: 587 HDLDEEEKASALHIHSEKLAIAFALMNSVPGSVIHVIKNLRVCTDCHTAIKLITKIAQRE 646

Query: 762 IVVRDANRFHHFKGGVCSCGDYW 784
           I+VRD  RFHHFK G CSCGDYW
Sbjct: 647 IIVRDLQRFHHFKDGSCSCGDYW 669



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 119/443 (26%), Positives = 193/443 (43%), Gaps = 46/443 (10%)

Query: 27  QTHAQIIIHG-FQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNN 85
           Q H   I  G F +D  + + L H  +       AR  F  IP P+  +   +  G+  N
Sbjct: 110 QLHLLAIRSGLFPSDPFSASALLHMYNHCSRPIDARKAFDEIPSPNPVIITAMASGYVRN 169

Query: 86  EMPKSSICFYTHL-RKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLF 144
            +   S+  +  L    +A   D        SA++   D  I   LH   + +G   D  
Sbjct: 170 NLVYPSLALFRKLIASGSATAVDEAAALVAFSASARIPDCGITSSLHALVVKTGLDGDAG 229

Query: 145 VGAALVDLYFKFSW--VKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVR 202
           V   ++D Y K     + +ARKVFD M EKD V WNSMI+   +N    D++ ++  M+ 
Sbjct: 230 VVNTMLDAYAKGGRRDLGAARKVFDTM-EKDVVSWNSMIALYAQNGMSADALGLYRKMLN 288

Query: 203 -NGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEV 261
            +G    ++ +++A+L A A    ++ G  I    +++G  ++VYV T +V  YSKCG V
Sbjct: 289 VSGSIKCNAVTLSAILLACAHAGTIQTGKCIHNQVVRMGLEENVYVGTSVVDMYSKCGRV 348

Query: 262 ERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVF 321
           E A   F+ I   +++S +AMI+GY  +G  + +L +F ++  S +  N  T + +    
Sbjct: 349 EMARKAFQKIKEKNILSWSAMITGYGMHGHGQEALDIFNEMCRSGQNPNYITFISV---- 404

Query: 322 YPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWN 381
                  L  C H+  L  G                      A +K F    E  +  + 
Sbjct: 405 -------LAACSHAGLLDKGRY-----------------WYNAMKKRF--GIEPGVEHYG 438

Query: 382 AMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSR 441
            M+    + G  +EA  L +EM   KV P+     ++LSAC     + L     E+   R
Sbjct: 439 CMVDLLGRAGCLDEAYGLIKEM---KVKPDAAIWGALLSACRIHKNVELA----EISAKR 491

Query: 442 NFE---SNIYVSTALIDMYAKCG 461
            FE   +N      L ++YA+ G
Sbjct: 492 LFELDATNCGYYVLLSNIYAEAG 514


>gi|449439555|ref|XP_004137551.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Cucumis sativus]
          Length = 776

 Score =  484 bits (1245), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 270/741 (36%), Positives = 415/741 (56%), Gaps = 40/741 (5%)

Query: 66  SIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRS 125
           +I   D+  +N  I  +      +S++  +  +R+ + +T  N   S  LS     C R 
Sbjct: 54  TIVDSDIVKWNRKISAYMRKGQCESALSVFNGMRRRSTVTY-NAMISGYLSNNKFDCARK 112

Query: 126 IGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLM 185
           +   +           DL     ++  Y K   + +AR +F++MPEKD V WN+M+SG  
Sbjct: 113 VFEKMPDR--------DLISWNVMLSGYVKNGNLSAARALFNQMPEKDVVSWNAMLSGFA 164

Query: 186 KNCCFQDSIWVFGDM-VRNGGTWLDSTSVAAVLPAVAEVQEL---RLGMEIQCLGLKLGF 241
           +N   +++  +F  M V+N  +W    S       + + + L   ++  EI      +G 
Sbjct: 165 QNGFVEEARKIFDQMLVKNEISWNGLLSAYVQNGRIEDARRLFDSKMDWEIVSWNCLMGG 224

Query: 242 H-------------DHVYVLTG-----LVSFYSKCGEVERAELLFRDIVRPDLISCNAMI 283
           +             D + V        +++ Y++ G +  A  LF ++   D+ +  AM+
Sbjct: 225 YVRKKRLDDARSLFDRMPVRDKISWNIMITGYAQNGLLSEARRLFEELPIRDVFAWTAMV 284

Query: 284 SGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIV 343
           SG+  NG  + + R+F ++    E   ++ I G +          L + + S        
Sbjct: 285 SGFVQNGMLDEATRIFEEMPEKNEVSWNAMIAGYVQSQQIEKARELFDQMPS-------- 336

Query: 344 SNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEM 403
            N+S    + T Y++   ++ A+ LFDE  ++   SW AMI+GY Q+G +EEA+ LF +M
Sbjct: 337 RNTSSWNTMVTGYAQCGNIDQAKILFDEMPQRDCISWAAMISGYAQSGQSEEALHLFIKM 396

Query: 404 QASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNI 463
           +      N   ++  LS+CA++ A+ LGK +H  +    F++      AL+ MY KCG+I
Sbjct: 397 KRDGGILNRSALACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSI 456

Query: 464 VEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYAC 523
            EA ++F+ ++ K  V+WNTMI+GY  HG G EAL LF  M  + I+P  VT + VL AC
Sbjct: 457 EEAFDVFEDITEKDIVSWNTMIAGYARHGFGKEALALFESMKMT-IKPDDVTLVGVLSAC 515

Query: 524 SHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAV 583
           SH G V +G E F SM  ++G    A+HY CM+D+LGRAG+L++AL  +K +   P  A 
Sbjct: 516 SHTGFVDKGMEYFNSMYQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAAT 575

Query: 584 WGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKK 643
           WGALLGA  IH DT L   A+EK+FE++P+N G +VLLSN+Y+A   + +   +R  ++ 
Sbjct: 576 WGALLGASRIHGDTELGEKAAEKVFEMEPDNSGMYVLLSNLYAASGRWREVREMRSKMRD 635

Query: 644 RKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHD 703
           + + K PG + +E+    H+FT GD  HP++  IYA LE+L+ ++++ GF + T   LHD
Sbjct: 636 KGVKKVPGYSWVEIQNKTHIFTVGDCSHPEAERIYAYLEELDLELKKDGFVSSTKLVLHD 695

Query: 704 VEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIV 763
           VEEEEKE M+K HSEKLA+AFG+++  PG  IR+IKNLRVC DCH A K ISK+T R I+
Sbjct: 696 VEEEEKEHMLKYHSEKLAVAFGILSIPPGRPIRVIKNLRVCEDCHNAIKHISKITQRQII 755

Query: 764 VRDANRFHHFKGGVCSCGDYW 784
           VRD+NRFHHF  G CSCGDYW
Sbjct: 756 VRDSNRFHHFSEGSCSCGDYW 776



 Score =  166 bits (419), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 130/521 (24%), Positives = 247/521 (47%), Gaps = 52/521 (9%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFV----L 115
           ARALF  +P+ D+  +N ++ GF+ N   + +   +  +     ++ +    ++V    +
Sbjct: 141 ARALFNQMPEKDVVSWNAMLSGFAQNGFVEEARKIFDQMLVKNEISWNGLLSAYVQNGRI 200

Query: 116 SAASACCDRSIGV-LLHGHAIVSGY--------GSDLFVGAALVDLYFKFSW-------- 158
             A    D  +   ++  + ++ GY           LF    + D   K SW        
Sbjct: 201 EDARRLFDSKMDWEIVSWNCLMGGYVRKKRLDDARSLFDRMPVRD---KISWNIMITGYA 257

Query: 159 ----VKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVA 214
               +  AR++F+++P +D   W +M+SG ++N    ++  +F +M        +  S  
Sbjct: 258 QNGLLSEARRLFEELPIRDVFAWTAMVSGFVQNGMLDEATRIFEEMPEK-----NEVSWN 312

Query: 215 AVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRP 274
           A++    + Q++    E+           +      +V+ Y++CG +++A++LF ++ + 
Sbjct: 313 AMIAGYVQSQQIEKAREL----FDQMPSRNTSSWNTMVTGYAQCGNIDQAKILFDEMPQR 368

Query: 275 DLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIH 334
           D IS  AMISGY  +G++E +L LF ++      +N S +   +        L L   +H
Sbjct: 369 DCISWAAMISGYAQSGQSEEALHLFIKMKRDGGILNRSALACALSSCAEIAALELGKQLH 428

Query: 335 SFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTE 394
              +K+G  +      AL  +Y +   +E A  +F++ +EK + SWN MIAGY ++G  +
Sbjct: 429 GRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAGYARHGFGK 488

Query: 395 EAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLG-KWVHELVKSRNFESNIYVSTAL 453
           EA++LF+ M+ + + P+ VT+  +LSAC+  G +  G ++ + + ++    +N    T +
Sbjct: 489 EALALFESMKMT-IKPDDVTLVGVLSACSHTGFVDKGMEYFNSMYQNYGITANAKHYTCM 547

Query: 454 IDMYAKCGNIVEARELFDLMS-HKSEVTWNTMISGYGLHGH---GLEALQLFSEML--HS 507
           ID+  + G + EA  L   M  +    TW  ++    +HG    G +A +   EM   +S
Sbjct: 548 IDLLGRAGRLDEALNLMKSMPFYPDAATWGALLGASRIHGDTELGEKAAEKVFEMEPDNS 607

Query: 508 GIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPL 548
           G+       LS LYA S  G  RE  E+ +S + D G K +
Sbjct: 608 GM----YVLLSNLYAAS--GRWREVREM-RSKMRDKGVKKV 641


>gi|297819536|ref|XP_002877651.1| hypothetical protein ARALYDRAFT_485272 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297323489|gb|EFH53910.1| hypothetical protein ARALYDRAFT_485272 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1217

 Score =  483 bits (1244), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 254/646 (39%), Positives = 379/646 (58%), Gaps = 39/646 (6%)

Query: 139 YGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFG 198
           Y S L  G  L+  Y     V +ARKVFD++PE++ ++ N MI   + N  +++ I VFG
Sbjct: 73  YNSSL--GVKLMRAYASLKDVATARKVFDEIPERNVIIINVMIRSYVNNGFYREGIQVFG 130

Query: 199 DMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKC 258
            M  +     D  +   VL A +    + +G +I     K+G    ++V  GLVS Y KC
Sbjct: 131 TMC-SCHVKPDHYTFPCVLKACSCSGNIVIGKKIHGSATKVGLSSTLFVGNGLVSMYGKC 189

Query: 259 GEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLI 318
           G +  A L+  ++ R D++S N++++GY  N + + +L + R++ +     ++ T+  L+
Sbjct: 190 GFLSEARLVLDEMSRRDVVSWNSLVAGYAQNQRFDDALEVCREMESVKISHDAGTMASLL 249

Query: 319 PVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLA 378
           P                       VSN+   T  + +Y         + +F +  +KSL 
Sbjct: 250 PA----------------------VSNT---TTENVMY--------VKDMFFKMGKKSLV 276

Query: 379 SWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELV 438
           SWN MI  Y +N +  EA+ L+  M+A    P+ V+++S+L AC    A+SLGK +H  +
Sbjct: 277 SWNVMIGVYMKNAMPVEAVELYSGMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYI 336

Query: 439 KSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEAL 498
           + +    N+ +  ALIDMYAKCG +  AR++F+ M  +  V+W  MIS YG  G G +A+
Sbjct: 337 ERKKLIPNLLLENALIDMYAKCGCLDRARDVFENMKSRDVVSWTAMISAYGFSGRGCDAV 396

Query: 499 QLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDI 558
            LFS+M  SG+ P  + F++ L ACSHAGL+ EG   F+ M   +   P  EH ACMVD+
Sbjct: 397 ALFSKMQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDL 456

Query: 559 LGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYH 618
           LGRAG++++A +FI+ + +EP   VWGALLGAC +H +T++  +A++KLF+L PE  GY+
Sbjct: 457 LGRAGKVKEAYKFIQEMPMEPNERVWGALLGACRVHSNTDIGLLAADKLFQLAPEQSGYY 516

Query: 619 VLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIY 678
           VLLSNIY+    + +   +R ++K + L K PG + +EV    H F  GD+ HPQS  IY
Sbjct: 517 VLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSAEIY 576

Query: 679 AMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEP---GTEI 735
             L+ L  KM+E G+  ++ +ALHDVEEE+KE  + VHSEKLAI F L+ TE       I
Sbjct: 577 RELDVLVKKMKELGYVPDSESALHDVEEEDKETHLAVHSEKLAIVFALMNTEEEDSNNAI 636

Query: 736 RIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCG 781
           RI KNLR+C DCH A K IS++T R I++RD NRFH F+ GVCSC 
Sbjct: 637 RITKNLRICGDCHVAAKLISQITSREIIIRDTNRFHVFRFGVCSCA 682



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 83/281 (29%), Positives = 131/281 (46%), Gaps = 8/281 (2%)

Query: 314 IVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESS 373
           ++G +   YP   L     +HS  +   +  NSS+   L   Y+ L ++  ARK+FDE  
Sbjct: 45  MLGQVLDTYP--DLKTLRTVHSRIISEDLRYNSSLGVKLMRAYASLKDVATARKVFDEIP 102

Query: 374 EKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKW 433
           E+++   N MI  Y  NG   E I +F  M +  V P+  T   +L AC+  G I +GK 
Sbjct: 103 ERNVIIINVMIRSYVNNGFYREGIQVFGTMCSCHVKPDHYTFPCVLKACSCSGNIVIGKK 162

Query: 434 VHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGH 493
           +H         S ++V   L+ MY KCG + EAR + D MS +  V+WN++++GY  +  
Sbjct: 163 IHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVAGYAQNQR 222

Query: 494 GLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYA 553
             +AL++  EM    I     T  S+L A S+     E     + M    G K L   + 
Sbjct: 223 FDDALEVCREMESVKISHDAGTMASLLPAVSNT--TTENVMYVKDMFFKMGKKSLVS-WN 279

Query: 554 CMVDILGRAGQLEKALEFIKGLAV---EPGPAVWGALLGAC 591
            M+ +  +     +A+E   G+     EP      ++L AC
Sbjct: 280 VMIGVYMKNAMPVEAVELYSGMEADGFEPDAVSITSVLPAC 320


>gi|48716903|dbj|BAD23598.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
          Length = 755

 Score =  483 bits (1243), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 275/747 (36%), Positives = 415/747 (55%), Gaps = 34/747 (4%)

Query: 39  NDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFS-NNEMPKSSICFYTH 97
           N   T    A R++D      A  LF ++P+     +N ++ G+S N  +P ++  F   
Sbjct: 42  NKAITAHMRAGRVAD------AERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFRAI 95

Query: 98  LRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFS 157
            R      PDN++Y+ +L A +     +    L     V     D      ++  +    
Sbjct: 96  PR------PDNYSYNTLLHALAVSSSLADARGLFDEMPVR----DSVTYNVMISSHANHG 145

Query: 158 WVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVL 217
            V  AR  FD  PEKD V WN M++  ++N   +++  +F     N  T  D  S  A++
Sbjct: 146 LVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLF-----NSRTEWDVISWNALM 200

Query: 218 PAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLI 277
               +  ++    E + L  ++   D V     +VS Y++ G++  A  LF      D+ 
Sbjct: 201 SGYVQWGKMS---EARELFDRMPGRD-VVSWNIMVSGYARRGDMVEARRLFDAAPVRDVF 256

Query: 278 SCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFC 337
           +  A++SGY  NG  E + R+F    A  ER N+ +   ++  +     +     + +  
Sbjct: 257 TWTAVVSGYAQNGMLEEARRVFD---AMPER-NAVSWNAMVAAYIQRRMMDEAKELFNMM 312

Query: 338 LKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAI 397
               + S +++LT     Y++   +E A+ +FD   +K   SW AM+A Y+Q G +EE +
Sbjct: 313 PCRNVASWNTMLTG----YAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETL 368

Query: 398 SLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMY 457
            LF EM       N    + +LS CA + A+  G  +H  +    +    +V  AL+ MY
Sbjct: 369 QLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMY 428

Query: 458 AKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFL 517
            KCGN+ +AR  F+ M  +  V+WNTMI+GY  HG G EAL++F  M  +  +P  +T +
Sbjct: 429 FKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLV 488

Query: 518 SVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAV 577
            VL ACSH+GLV +G   F SM HD G     EHY CM+D+LGRAG+L +A + +K +  
Sbjct: 489 GVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPF 548

Query: 578 EPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATV 637
           EP   +WGALLGA  IH++  L R A+EK+FEL+PEN G +VLLSNIY++   +  A  +
Sbjct: 549 EPDSTMWGALLGASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYASSGKWRDARKM 608

Query: 638 RQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTET 697
           R ++++R + K PG + IEV    H F++GD +HP+   IYA LE L+ +M++AG+ + T
Sbjct: 609 RVMMEERGVKKVPGFSWIEVQNKVHTFSAGDCVHPEKEKIYAFLEDLDMRMKKAGYVSAT 668

Query: 698 VTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKV 757
              LHDVEEEEKE M+K HSEKLA+A+G++   PG  IR+IKNLRVC DCH A K+IS +
Sbjct: 669 DMVLHDVEEEEKEHMLKYHSEKLAVAYGILNIPPGRPIRVIKNLRVCGDCHNAFKYISAI 728

Query: 758 TGRVIVVRDANRFHHFKGGVCSCGDYW 784
            GR+I++RD+NRFHHF+GG CSCGDYW
Sbjct: 729 EGRLILLRDSNRFHHFRGGSCSCGDYW 755



 Score = 44.7 bits (104), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 30/124 (24%), Positives = 54/124 (43%), Gaps = 18/124 (14%)

Query: 443 FESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFS 502
            E  +  S   I  + + G + +A  LF  M  +S  T+N M++GY  +G     L L +
Sbjct: 34  LEPEVIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGR----LPLAA 89

Query: 503 EMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSM-IHD-------------HGFKPL 548
            +  +  RP   ++ ++L+A + +  + +   +F  M + D             HG   L
Sbjct: 90  SLFRAIPRPDNYSYNTLLHALAVSSSLADARGLFDEMPVRDSVTYNVMISSHANHGLVSL 149

Query: 549 AEHY 552
           A HY
Sbjct: 150 ARHY 153


>gi|115471645|ref|NP_001059421.1| Os07g0299800 [Oryza sativa Japonica Group]
 gi|34394298|dbj|BAC84780.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113610957|dbj|BAF21335.1| Os07g0299800 [Oryza sativa Japonica Group]
          Length = 673

 Score =  483 bits (1243), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 247/565 (43%), Positives = 352/565 (62%), Gaps = 16/565 (2%)

Query: 231 EIQCLGLKLG-FHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCN 289
           ++  L L+ G F    Y  + L+  Y  C     A   F +I  P+ +   AM SGY  N
Sbjct: 114 QLHLLALRSGLFPSDPYSASALLHMYHHCSRPMDARRAFDEIPDPNPVIVTAMASGYVRN 173

Query: 290 GKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFG------HLHLTNCIHSFCLKSGIV 343
                SL LFR ++AS    +S+++V        F          +T  +H+   K G  
Sbjct: 174 NLVYHSLELFRAMIAS----DSASVVDEAAALVAFSASARVPDRGVTASLHALIAKIGFE 229

Query: 344 SNSSVLTALSTVYSR--LNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQ 401
            N+ V+  +   Y++    ++E ARK+FD + E+ + SWN+MIA Y QNG++ EAI L+ 
Sbjct: 230 RNAGVVNTMLDSYAKGGSRDLEVARKVFD-TMERDVVSWNSMIALYAQNGMSAEAIGLYS 288

Query: 402 EM--QASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAK 459
           +M      +  N V +S++L ACA  GAI  GK +H  V     E N+YV T+++DMY+K
Sbjct: 289 KMLNVGGGIKCNAVALSAVLLACAHAGAIQTGKRIHNQVVRMGLEENVYVGTSIVDMYSK 348

Query: 460 CGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSV 519
           CG +  A   F  +  K+ ++W+ MI+GYG+HG G EAL++F+EM  SG+RP+ +TF+SV
Sbjct: 349 CGRVEMASRAFRKIKEKNILSWSAMITGYGMHGRGQEALEIFTEMKRSGLRPNYITFISV 408

Query: 520 LYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEP 579
           L ACSHAGL+ EG   + +M  + G +   EHY CMVD+LGRAG L++A   IK + V+P
Sbjct: 409 LAACSHAGLLDEGRYWYNAMKQEFGIEAGVEHYGCMVDLLGRAGCLDEAYSLIKEMKVKP 468

Query: 580 GPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQ 639
             A+WGALL AC IHK+  LA ++ ++LFELD  N GY+VLLSNIY+  R +     +R 
Sbjct: 469 DAAIWGALLSACRIHKNVELAEMSVKRLFELDASNSGYYVLLSNIYAEARMWKDVERIRL 528

Query: 640 VVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVT 699
           +VK R++ K PG +  E+ G  ++F  GD+ HPQ   IY+ LEKL  +M+EAG+   T +
Sbjct: 529 LVKTRRIEKPPGYSSFELKGKIYLFYVGDKSHPQHIEIYSYLEKLLERMQEAGYVPNTGS 588

Query: 700 ALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTG 759
            LHD++EEEKE  +++HSEKLA+AF L+ + P + I IIKNLRVC DCHTA KFI+K+T 
Sbjct: 589 VLHDLDEEEKESALRIHSEKLAVAFALMNSVPRSVIHIIKNLRVCSDCHTAMKFITKITE 648

Query: 760 RVIVVRDANRFHHFKGGVCSCGDYW 784
           R I++RD  RFHHFK G+CSC DYW
Sbjct: 649 REIIIRDLQRFHHFKDGLCSCRDYW 673



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 100/370 (27%), Positives = 191/370 (51%), Gaps = 9/370 (2%)

Query: 130 LHGHAIVSG-YGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNC 188
           LH  A+ SG + SD +  +AL+ +Y   S    AR+ FD++P+ + V+  +M SG ++N 
Sbjct: 115 LHLLALRSGLFPSDPYSASALLHMYHHCSRPMDARRAFDEIPDPNPVIVTAMASGYVRNN 174

Query: 189 CFQDSIWVFGDMV-RNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYV 247
               S+ +F  M+  +  + +D  +      A A V +  +   +  L  K+GF  +  V
Sbjct: 175 LVYHSLELFRAMIASDSASVVDEAAALVAFSASARVPDRGVTASLHALIAKIGFERNAGV 234

Query: 248 LTGLVSFYSKCG--EVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLL-- 303
           +  ++  Y+K G  ++E A  +F D +  D++S N+MI+ Y  NG +  ++ L+ ++L  
Sbjct: 235 VNTMLDSYAKGGSRDLEVARKVF-DTMERDVVSWNSMIALYAQNGMSAEAIGLYSKMLNV 293

Query: 304 ASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEME 363
               + N+  +  ++      G +     IH+  ++ G+  N  V T++  +YS+   +E
Sbjct: 294 GGGIKCNAVALSAVLLACAHAGAIQTGKRIHNQVVRMGLEENVYVGTSIVDMYSKCGRVE 353

Query: 364 AARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACA 423
            A + F +  EK++ SW+AMI GY  +G  +EA+ +F EM+ S + PN +T  S+L+AC+
Sbjct: 354 MASRAFRKIKEKNILSWSAMITGYGMHGRGQEALEIFTEMKRSGLRPNYITFISVLAACS 413

Query: 424 QLGAISLGK-WVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVT-W 481
             G +  G+ W + + +    E+ +     ++D+  + G + EA  L   M  K +   W
Sbjct: 414 HAGLLDEGRYWYNAMKQEFGIEAGVEHYGCMVDLLGRAGCLDEAYSLIKEMKVKPDAAIW 473

Query: 482 NTMISGYGLH 491
             ++S   +H
Sbjct: 474 GALLSACRIH 483



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 106/390 (27%), Positives = 176/390 (45%), Gaps = 38/390 (9%)

Query: 37  FQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSI-CFY 95
           F +D  + + L H          AR  F  IP P+  +   +  G+  N +   S+  F 
Sbjct: 125 FPSDPYSASALLHMYHHCSRPMDARRAFDEIPDPNPVIVTAMASGYVRNNLVYHSLELFR 184

Query: 96  THLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFK 155
             +  ++A   D        SA++   DR +   LH      G+  +  V   ++D Y K
Sbjct: 185 AMIASDSASVVDEAAALVAFSASARVPDRGVTASLHALIAKIGFERNAGVVNTMLDSYAK 244

Query: 156 FSW--VKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVR-NGGTWLDSTS 212
                ++ ARKVFD M E+D V WNSMI+   +N    ++I ++  M+   GG   ++ +
Sbjct: 245 GGSRDLEVARKVFDTM-ERDVVSWNSMIALYAQNGMSAEAIGLYSKMLNVGGGIKCNAVA 303

Query: 213 VAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIV 272
           ++AVL A A    ++ G  I    +++G  ++VYV T +V  YSKCG VE A   FR I 
Sbjct: 304 LSAVLLACAHAGAIQTGKRIHNQVVRMGLEENVYVGTSIVDMYSKCGRVEMASRAFRKIK 363

Query: 273 RPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNC 332
             +++S +AMI+GY  +G+ + +L +F ++  S  R N  T + +           L  C
Sbjct: 364 EKNILSWSAMITGYGMHGRGQEALEIFTEMKRSGLRPNYITFISV-----------LAAC 412

Query: 333 IHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGL 392
            H+  L  G              Y+ + +        +   E  +  +  M+    + G 
Sbjct: 413 SHAGLLDEG-----------RYWYNAMKQ--------EFGIEAGVEHYGCMVDLLGRAGC 453

Query: 393 TEEAISLFQEMQASKVAPNPVTVSSILSAC 422
            +EA SL +EM   KV P+     ++LSAC
Sbjct: 454 LDEAYSLIKEM---KVKPDAAIWGALLSAC 480



 Score = 63.2 bits (152), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 66/281 (23%), Positives = 125/281 (44%), Gaps = 13/281 (4%)

Query: 29  HAQIIIHGFQNDLSTVTKL--AHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNE 86
           HA I   GF+ +   V  +  ++     +    AR +F ++ + D+  +N +I  ++ N 
Sbjct: 220 HALIAKIGFERNAGVVNTMLDSYAKGGSRDLEVARKVFDTMER-DVVSWNSMIALYAQNG 278

Query: 87  MPKSSICFYTH-LRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFV 145
           M   +I  Y+  L     +  +    S VL A +       G  +H   +  G   +++V
Sbjct: 279 MSAEAIGLYSKMLNVGGGIKCNAVALSAVLLACAHAGAIQTGKRIHNQVVRMGLEENVYV 338

Query: 146 GAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNG- 204
           G ++VD+Y K   V+ A + F K+ EK+ + W++MI+G   +   Q+++ +F +M R+G 
Sbjct: 339 GTSIVDMYSKCGRVEMASRAFRKIKEKNILSWSAMITGYGMHGRGQEALEIFTEMKRSGL 398

Query: 205 -GTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVER 263
              ++   SV A       + E R       +  + G    V     +V    + G ++ 
Sbjct: 399 RPNYITFISVLAACSHAGLLDEGRYWY--NAMKQEFGIEAGVEHYGCMVDLLGRAGCLDE 456

Query: 264 AELLFRDI-VRPDLISCNAMISGYTCNGKTE----SSLRLF 299
           A  L +++ V+PD     A++S    +   E    S  RLF
Sbjct: 457 AYSLIKEMKVKPDAAIWGALLSACRIHKNVELAEMSVKRLF 497


>gi|224080660|ref|XP_002306200.1| predicted protein [Populus trichocarpa]
 gi|222849164|gb|EEE86711.1| predicted protein [Populus trichocarpa]
          Length = 784

 Score =  483 bits (1243), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 265/726 (36%), Positives = 409/726 (56%), Gaps = 19/726 (2%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           A  +F  +   D F++NVIIRG++NN + + +I FY  + +   +  DNFT+ FV+ A  
Sbjct: 77  ALDMFEKMNHSDTFIWNVIIRGYTNNGLFQEAIDFYYRM-ECEGIRSDNFTFPFVIKACG 135

Query: 120 ACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNS 179
                 +G  +HG  I  G+  D++V   L+D+Y K  +++ A KVFD+MP +D V WNS
Sbjct: 136 ELLALMVGQKVHGKLIKIGFDLDVYVCNFLIDMYLKIGFIELAEKVFDEMPVRDLVSWNS 195

Query: 180 MISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKL 239
           M+SG   +     S+  F +M+R G    D   + + L A +    LR GMEI C  ++ 
Sbjct: 196 MVSGYQIDGDGLSSLMCFKEMLRLGNK-ADRFGMISALGACSIEHCLRSGMEIHCQVIRS 254

Query: 240 GFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLF 299
                + V T L+  Y KCG+V+ AE +F  I   ++++ NAMI G   + K    +   
Sbjct: 255 ELELDIMVQTSLIDMYGKCGKVDYAERVFNRIYSKNIVAWNAMIGGMQEDDKVIPDV--- 311

Query: 300 RQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRL 359
                        T++ L+P     G L     IH F ++   +    + TAL  +Y + 
Sbjct: 312 ------------ITMINLLPSCSQSGALLEGKSIHGFAIRKMFLPYLVLETALVDMYGKC 359

Query: 360 NEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSIL 419
            E++ A  +F++ +EK++ SWN M+A Y QN   +EA+ +FQ +    + P+ +T++S+L
Sbjct: 360 GELKLAEHVFNQMNEKNMVSWNTMVAAYVQNEQYKEALKMFQHILNEPLKPDAITIASVL 419

Query: 420 SACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEV 479
            A A+L + S GK +H  +      SN ++S A++ MYAKCG++  ARE FD M  K  V
Sbjct: 420 PAVAELASRSEGKQIHSYIMKLGLGSNTFISNAIVYMYAKCGDLQTAREFFDGMVCKDVV 479

Query: 480 TWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSM 539
           +WNTMI  Y +HG G  ++Q FSEM   G +P+G TF+S+L ACS +GL+ EG   F SM
Sbjct: 480 SWNTMIMAYAIHGFGRTSIQFFSEMRGKGFKPNGSTFVSLLTACSISGLIDEGWGFFNSM 539

Query: 540 IHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNL 599
             ++G  P  EHY CM+D+LGR G L++A  FI+ + + P   +WG+LL A   H D  L
Sbjct: 540 KVEYGIDPGIEHYGCMLDLLGRNGNLDEAKCFIEEMPLVPTARIWGSLLAASRNHNDVVL 599

Query: 600 ARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGG 659
           A +A+  +  L  +N G +VLLSN+Y+    +     ++ ++K++ L K  GC+++++ G
Sbjct: 600 AELAARHILSLKHDNTGCYVLLSNMYAEAGRWEDVDRIKYLMKEQGLVKTVGCSMVDING 659

Query: 660 TPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKE-LMMKVHSE 718
               F + D+ H  +  IY +L+ L  K+ E  +   ++T    ++  +K     + HS 
Sbjct: 660 RSESFINQDRSHAHTNLIYDVLDILLKKIGEDIY-LHSLTKFRPLDVAKKRGNSPEYHSV 718

Query: 719 KLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVC 778
           KLAI FGLI+T  G  + + KN R+C DCH A K IS+VT R IVV DA  FHHF+ G C
Sbjct: 719 KLAICFGLISTAIGNPVIVRKNTRICDDCHRAAKKISQVTKREIVVGDAKVFHHFRDGCC 778

Query: 779 SCGDYW 784
           SC DYW
Sbjct: 779 SCRDYW 784



 Score =  196 bits (497), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 131/440 (29%), Positives = 221/440 (50%), Gaps = 30/440 (6%)

Query: 161 SARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAV 220
           +A  +F+KM   DT +WN +I G   N  FQ++I  +  M    G   D+ +   V+ A 
Sbjct: 76  NALDMFEKMNHSDTFIWNVIIRGYTNNGLFQEAIDFYYRM-ECEGIRSDNFTFPFVIKAC 134

Query: 221 AEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCN 280
            E+  L +G ++    +K+GF   VYV   L+  Y K G +E AE +F ++   DL+S N
Sbjct: 135 GELLALMVGQKVHGKLIKIGFDLDVYVCNFLIDMYLKIGFIELAEKVFDEMPVRDLVSWN 194

Query: 281 AMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNC------IH 334
           +M+SGY  +G   SSL  F+++L      N +   G+I      G   + +C      IH
Sbjct: 195 SMVSGYQIDGDGLSSLMCFKEMLRLG---NKADRFGMISA---LGACSIEHCLRSGMEIH 248

Query: 335 SFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTE 394
              ++S +  +  V T+L  +Y +  +++ A ++F+    K++ +WNAMI G  ++    
Sbjct: 249 CQVIRSELELDIMVQTSLIDMYGKCGKVDYAERVFNRIYSKNIVAWNAMIGGMQED---- 304

Query: 395 EAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALI 454
                       KV P+ +T+ ++L +C+Q GA+  GK +H     + F   + + TAL+
Sbjct: 305 -----------DKVIPDVITMINLLPSCSQSGALLEGKSIHGFAIRKMFLPYLVLETALV 353

Query: 455 DMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGV 514
           DMY KCG +  A  +F+ M+ K+ V+WNTM++ Y  +    EAL++F  +L+  ++P  +
Sbjct: 354 DMYGKCGELKLAEHVFNQMNEKNMVSWNTMVAAYVQNEQYKEALKMFQHILNEPLKPDAI 413

Query: 515 TFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKG 574
           T  SVL A +      EG +I  S I   G          +V +  + G L+ A EF  G
Sbjct: 414 TIASVLPAVAELASRSEGKQI-HSYIMKLGLGSNTFISNAIVYMYAKCGDLQTAREFFDG 472

Query: 575 LAVEPGPAVWGALLGACMIH 594
           +  +     W  ++ A  IH
Sbjct: 473 MVCKD-VVSWNTMIMAYAIH 491



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 73/229 (31%), Positives = 117/229 (51%), Gaps = 2/229 (0%)

Query: 362 MEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSA 421
           M  A  +F++ +      WN +I GYT NGL +EAI  +  M+   +  +  T   ++ A
Sbjct: 74  MGNALDMFEKMNHSDTFIWNVIIRGYTNNGLFQEAIDFYYRMECEGIRSDNFTFPFVIKA 133

Query: 422 CAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTW 481
           C +L A+ +G+ VH  +    F+ ++YV   LIDMY K G I  A ++FD M  +  V+W
Sbjct: 134 CGELLALMVGQKVHGKLIKIGFDLDVYVCNFLIDMYLKIGFIELAEKVFDEMPVRDLVSW 193

Query: 482 NTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIH 541
           N+M+SGY + G GL +L  F EML  G +      +S L ACS    +R G EI   +I 
Sbjct: 194 NSMVSGYQIDGDGLSSLMCFKEMLRLGNKADRFGMISALGACSIEHCLRSGMEIHCQVIR 253

Query: 542 DHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGA 590
                 +    + ++D+ G+ G+++ A E +           W A++G 
Sbjct: 254 SELELDIMVQTS-LIDMYGKCGKVDYA-ERVFNRIYSKNIVAWNAMIGG 300



 Score =  120 bits (300), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 107/453 (23%), Positives = 194/453 (42%), Gaps = 51/453 (11%)

Query: 27  QTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNE 86
           + H Q+I    + D+   T L           YA  +F  I   ++  +N +I G     
Sbjct: 246 EIHCQVIRSELELDIMVQTSLIDMYGKCGKVDYAERVFNRIYSKNIVAWNAMIGG----- 300

Query: 87  MPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVG 146
                      ++++  + PD  T   +L + S       G  +HG AI   +   L + 
Sbjct: 301 -----------MQEDDKVIPDVITMINLLPSCSQSGALLEGKSIHGFAIRKMFLPYLVLE 349

Query: 147 AALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGT 206
            ALVD+Y K   +K A  VF++M EK+ V WN+M++  ++N  +++++ +F  ++ N   
Sbjct: 350 TALVDMYGKCGELKLAEHVFNQMNEKNMVSWNTMVAAYVQNEQYKEALKMFQHIL-NEPL 408

Query: 207 WLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAEL 266
             D+ ++A+VLPAVAE+     G +I    +KLG   + ++   +V  Y+KCG+++ A  
Sbjct: 409 KPDAITIASVLPAVAELASRSEGKQIHSYIMKLGLGSNTFISNAIVYMYAKCGDLQTARE 468

Query: 267 LFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGH 326
            F  +V  D++S N MI  Y  +G   +S++ F ++     + N ST V L+        
Sbjct: 469 FFDGMVCKDVVSWNTMIMAYAIHGFGRTSIQFFSEMRGKGFKPNGSTFVSLLTA------ 522

Query: 327 LHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAG 386
                     C  SG++            +   N M+    +     +  +  +  M+  
Sbjct: 523 ----------CSISGLIDEG---------WGFFNSMKVEYGI-----DPGIEHYGCMLDL 558

Query: 387 YTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESN 446
             +NG  +EA    +EM    + P      S+L+A      + L +     + S   + N
Sbjct: 559 LGRNGNLDEAKCFIEEM---PLVPTARIWGSLLAASRNHNDVVLAELAARHILSLKHD-N 614

Query: 447 IYVSTALIDMYAKCGNIVEARELFDLMSHKSEV 479
                 L +MYA+ G   +   +  LM  +  V
Sbjct: 615 TGCYVLLSNMYAEAGRWEDVDRIKYLMKEQGLV 647



 Score = 47.0 bits (110), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 36/142 (25%), Positives = 63/142 (44%), Gaps = 6/142 (4%)

Query: 457 YAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTF 516
           + + G +  A ++F+ M+H     WN +I GY  +G   EA+  +  M   GIR    TF
Sbjct: 68  FVESGLMGNALDMFEKMNHSDTFIWNVIIRGYTNNGLFQEAIDFYYRMECEGIRSDNFTF 127

Query: 517 LSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYAC--MVDILGRAGQLEKALEFIKG 574
             V+ AC     +  G ++   +I   GF    + Y C  ++D+  + G +E A +    
Sbjct: 128 PFVIKACGELLALMVGQKVHGKLIK-IGFD--LDVYVCNFLIDMYLKIGFIELAEKVFDE 184

Query: 575 LAVEPGPAVWGALLGACMIHKD 596
           + V      W +++    I  D
Sbjct: 185 MPVRD-LVSWNSMVSGYQIDGD 205


>gi|356545843|ref|XP_003541343.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930-like [Glycine max]
          Length = 747

 Score =  483 bits (1243), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 254/717 (35%), Positives = 398/717 (55%), Gaps = 62/717 (8%)

Query: 130 LHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCC 189
           +H H I +    ++F+   LV  Y KF  +  AR+VFD+MP+++   WN+++S   K  C
Sbjct: 31  IHCHIIKAFRNPEIFLLNNLVSAYAKFDRITYARRVFDQMPQRNLYSWNTLLSSYSKLAC 90

Query: 190 FQD-------------------------------SIWVFGDMVRNGGTWLDSTSVAAVLP 218
             +                               S+  +  M+ NG   L+  +++ +L 
Sbjct: 91  LPEMERVFHAMPTRDMVSWNSLISAYAGRGFLLQSVKAYNLMLYNGPFNLNRIALSTMLI 150

Query: 219 AVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSK--------------------- 257
             ++   + LG+++    +K GF  +V+V + LV  YSK                     
Sbjct: 151 LASKQGCVHLGLQVHGHVVKFGFQSYVFVGSPLVDMYSKTGLVFCARQAFDEMPEKNVVM 210

Query: 258 ----------CGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAE 307
                     C  +E +  LF D+   D IS  AMI+G+T NG    ++ LFR++     
Sbjct: 211 YNTLIAGLMRCSRIEDSRQLFYDMQEKDSISWTAMIAGFTQNGLDREAIDLFREMRLENL 270

Query: 308 RVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARK 367
            ++  T   ++        L     +H++ +++    N  V +AL  +Y +   +++A  
Sbjct: 271 EMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYQDNIFVGSALVDMYCKCKSIKSAET 330

Query: 368 LFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGA 427
           +F + + K++ SW AM+ GY QNG +EEA+ +F +MQ + + P+  T+ S++S+CA L +
Sbjct: 331 VFRKMNCKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQNNGIEPDDFTLGSVISSCANLAS 390

Query: 428 ISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISG 487
           +  G   H         S I VS AL+ +Y KCG+I ++  LF  MS+  EV+W  ++SG
Sbjct: 391 LEEGAQFHCRALVSGLISFITVSNALVTLYGKCGSIEDSHRLFSEMSYVDEVSWTALVSG 450

Query: 488 YGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKP 547
           Y   G   E L+LF  ML  G +P  VTF+ VL ACS AGLV++G++IF+SMI +H   P
Sbjct: 451 YAQFGKANETLRLFESMLAHGFKPDKVTFIGVLSACSRAGLVQKGNQIFESMIKEHRIIP 510

Query: 548 LAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKL 607
           + +HY CM+D+  RAG+LE+A +FI  +   P    W +LL +C  H++  + + A+E L
Sbjct: 511 IEDHYTCMIDLFSRAGRLEEARKFINKMPFSPDAIGWASLLSSCRFHRNMEIGKWAAESL 570

Query: 608 FELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSG 667
            +L+P N   ++LLS+IY+A+  + + A +R+ ++ + L K PGC+ I+     H+F++ 
Sbjct: 571 LKLEPHNTASYILLSSIYAAKGKWEEVANLRKGMRDKGLRKEPGCSWIKYKNQVHIFSAD 630

Query: 668 DQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLI 727
           DQ +P S  IY+ LEKLN KM + G+  +  + LHDV++ EK  M+  HSEKLAIAFGLI
Sbjct: 631 DQSNPFSDQIYSELEKLNYKMVQEGYVPDMNSVLHDVDDSEKIKMLNHHSEKLAIAFGLI 690

Query: 728 ATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
              PG  IR++KNLRVC DCH ATK+ISK+T R I+VRDA RFH FK G CSCGD+W
Sbjct: 691 FIPPGLPIRVVKNLRVCGDCHNATKYISKITQREILVRDAARFHLFKDGRCSCGDFW 747



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 142/546 (26%), Positives = 252/546 (46%), Gaps = 68/546 (12%)

Query: 10  NLFLSLLKGAKTQSQLTQTHAQIIIHGFQN-DLSTVTKLAHRLSDFKATCYARALFFSIP 68
           N +  LLK  +   ++   H  II   F+N ++  +  L    + F    YAR +F  +P
Sbjct: 16  NHYCELLKHCRDTKKI---HCHII-KAFRNPEIFLLNNLVSAYAKFDRITYARRVFDQMP 71

Query: 69  KPDLFLFNVIIRGFSN-----------NEMPK--------------------SSICFYTH 97
           + +L+ +N ++  +S            + MP                      S+  Y  
Sbjct: 72  QRNLYSWNTLLSSYSKLACLPEMERVFHAMPTRDMVSWNSLISAYAGRGFLLQSVKAYNL 131

Query: 98  LRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFS 157
           +  N     +    S +L  AS      +G+ +HGH +  G+ S +FVG+ LVD+Y K  
Sbjct: 132 MLYNGPFNLNRIALSTMLILASKQGCVHLGLQVHGHVVKFGFQSYVFVGSPLVDMYSKTG 191

Query: 158 WVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMV-RNGGTW--------- 207
            V  AR+ FD+MPEK+ V++N++I+GLM+    +DS  +F DM  ++  +W         
Sbjct: 192 LVFCARQAFDEMPEKNVVMYNTLIAGLMRCSRIEDSRQLFYDMQEKDSISWTAMIAGFTQ 251

Query: 208 --------------------LDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYV 247
                               +D  +  +VL A   V  L+ G ++    ++  + D+++V
Sbjct: 252 NGLDREAIDLFREMRLENLEMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYQDNIFV 311

Query: 248 LTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAE 307
            + LV  Y KC  ++ AE +FR +   +++S  AM+ GY  NG +E ++++F  +  +  
Sbjct: 312 GSALVDMYCKCKSIKSAETVFRKMNCKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQNNGI 371

Query: 308 RVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARK 367
             +  T+  +I        L      H   L SG++S  +V  AL T+Y +   +E + +
Sbjct: 372 EPDDFTLGSVISSCANLASLEEGAQFHCRALVSGLISFITVSNALVTLYGKCGSIEDSHR 431

Query: 368 LFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGA 427
           LF E S     SW A+++GY Q G   E + LF+ M A    P+ VT   +LSAC++ G 
Sbjct: 432 LFSEMSYVDEVSWTALVSGYAQFGKANETLRLFESMLAHGFKPDKVTFIGVLSACSRAGL 491

Query: 428 ISLGKWVHE-LVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSE-VTWNTMI 485
           +  G  + E ++K           T +ID++++ G + EAR+  + M    + + W +++
Sbjct: 492 VQKGNQIFESMIKEHRIIPIEDHYTCMIDLFSRAGRLEEARKFINKMPFSPDAIGWASLL 551

Query: 486 SGYGLH 491
           S    H
Sbjct: 552 SSCRFH 557


>gi|357507065|ref|XP_003623821.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355498836|gb|AES80039.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 837

 Score =  483 bits (1242), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 249/680 (36%), Positives = 405/680 (59%), Gaps = 9/680 (1%)

Query: 109 FTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFD- 167
           FT   VL   S+      G ++HG  + +G+  ++FV   LVD+Y K   V  A  +F  
Sbjct: 163 FTLGSVLRVCSSLGLIQTGEMIHGFVVKNGFEGNVFVVTGLVDMYAKCKCVSEAEFLFKG 222

Query: 168 -KMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQEL 226
            +   K+ VLW +M++G  +N     ++  F  M    G   +  +   +L A + V   
Sbjct: 223 LEFDRKNHVLWTAMVTGYAQNGDGYKAVEFFRYM-HAQGVECNQYTFPTILTACSSVLAR 281

Query: 227 RLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGY 286
             G ++    +K GF  +VYV + LV  Y+KCG+++ A+ +   +   D++S N+++ G+
Sbjct: 282 CFGEQVHGFIVKSGFGSNVYVQSALVDMYAKCGDLKNAKNMLETMEDDDVVSWNSLMVGF 341

Query: 287 TCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNS 346
             +G  E +LRLF+ +     +++  T   ++      G ++    +H   +K+G  +  
Sbjct: 342 VRHGLEEEALRLFKNMHGRNMKIDDYTFPSVLNCCV-VGSIN-PKSVHGLIIKTGFENYK 399

Query: 347 SVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQAS 406
            V  AL  +Y++  +M+ A  +F++  EK + SW +++ GY QN   EE++ +F +M+ +
Sbjct: 400 LVSNALVDMYAKTGDMDCAYTVFEKMLEKDVISWTSLVTGYAQNNSHEESLKIFCDMRVT 459

Query: 407 KVAPNPVTVSSILSACAQLGAISLGKWVH-ELVKSR-NFESNIYVSTALIDMYAKCGNIV 464
            V P+   V+SILSACA+L  +  GK VH + +KS   +  ++Y   +L+ MYAKCG + 
Sbjct: 460 GVNPDQFIVASILSACAELTLLEFGKQVHLDFIKSGLRWSQSVY--NSLVAMYAKCGCLD 517

Query: 465 EARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACS 524
           +A  +F  M  K  +TW  +I GY  +G G  +L+ +  M+ SG RP  +TF+ +L+ACS
Sbjct: 518 DADAIFVSMQVKDVITWTAIIVGYAQNGKGRNSLKFYDAMVSSGTRPDFITFIGLLFACS 577

Query: 525 HAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVW 584
           HAGLV EG + FQ M   +G KP  EHYACM+D+ GR+G+L++A + +  + V+P   VW
Sbjct: 578 HAGLVDEGRKYFQQMNKVYGIKPGPEHYACMIDLFGRSGKLDEAKQLLDQMDVKPDATVW 637

Query: 585 GALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKR 644
            +LL AC +H++  LA  A+  LFEL+P N   +V+LSN+YSA R +   A +R+++K +
Sbjct: 638 KSLLSACRVHENLELAERAATNLFELEPMNAMPYVMLSNMYSASRKWNDVAKIRKLMKSK 697

Query: 645 KLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDV 704
            + K PGC+ +E+    + F S D+ HP+   IY  ++++  +++EAG+  +   +LHD+
Sbjct: 698 GIVKEPGCSWLEINSRVNTFISDDRGHPREAEIYTKIDEIILRIKEAGYVPDMSFSLHDM 757

Query: 705 EEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVV 764
           ++E KE+ +  HSEKLA+AFGL+A  P   IRI KNLRVC DCH+A K+IS+V  R I++
Sbjct: 758 DKEGKEVGLAYHSEKLAVAFGLLAAPPSAPIRIFKNLRVCGDCHSAMKYISRVFTRHIIL 817

Query: 765 RDANRFHHFKGGVCSCGDYW 784
           RD+N FHHF+ G CSCGDYW
Sbjct: 818 RDSNCFHHFREGECSCGDYW 837



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 129/444 (29%), Positives = 217/444 (48%), Gaps = 39/444 (8%)

Query: 159 VKSARKVFDKMPEKDTVLWNSMIS-------------------------------GLMKN 187
           V  ARK+FDKMP+KD   WN+MIS                               G  K 
Sbjct: 81  VNDARKLFDKMPQKDEYSWNTMISSYVNVGRLVEARELFDGCSCKSSITWSSIISGYCKF 140

Query: 188 CCFQDSIWVFGDMVRNGGTWLDST-SVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVY 246
            C  ++  +F  M   G  W  S  ++ +VL   + +  ++ G  I    +K GF  +V+
Sbjct: 141 GCKVEAFDLFRSMRLEG--WKASQFTLGSVLRVCSSLGLIQTGEMIHGFVVKNGFEGNVF 198

Query: 247 VLTGLVSFYSKCGEVERAELLFR--DIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLA 304
           V+TGLV  Y+KC  V  AE LF+  +  R + +   AM++GY  NG    ++  FR + A
Sbjct: 199 VVTGLVDMYAKCKCVSEAEFLFKGLEFDRKNHVLWTAMVTGYAQNGDGYKAVEFFRYMHA 258

Query: 305 SAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEA 364
                N  T   ++              +H F +KSG  SN  V +AL  +Y++  +++ 
Sbjct: 259 QGVECNQYTFPTILTACSSVLARCFGEQVHGFIVKSGFGSNVYVQSALVDMYAKCGDLKN 318

Query: 365 ARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQ 424
           A+ + +   +  + SWN+++ G+ ++GL EEA+ LF+ M    +  +  T  S+L+ C  
Sbjct: 319 AKNMLETMEDDDVVSWNSLMVGFVRHGLEEEALRLFKNMHGRNMKIDDYTFPSVLNCCV- 377

Query: 425 LGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTM 484
           +G+I+  K VH L+    FE+   VS AL+DMYAK G++  A  +F+ M  K  ++W ++
Sbjct: 378 VGSIN-PKSVHGLIIKTGFENYKLVSNALVDMYAKTGDMDCAYTVFEKMLEKDVISWTSL 436

Query: 485 ISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHG 544
           ++GY  +    E+L++F +M  +G+ P      S+L AC+   L+  G ++    I   G
Sbjct: 437 VTGYAQNNSHEESLKIFCDMRVTGVNPDQFIVASILSACAELTLLEFGKQVHLDFIKS-G 495

Query: 545 FKPLAEHYACMVDILGRAGQLEKA 568
            +     Y  +V +  + G L+ A
Sbjct: 496 LRWSQSVYNSLVAMYAKCGCLDDA 519



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 114/469 (24%), Positives = 232/469 (49%), Gaps = 12/469 (2%)

Query: 29  HAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALF--FSIPKPDLFLFNVIIRGFSNNE 86
           H  ++ +GF+ ++  VT L    +  K    A  LF      + +  L+  ++ G++ N 
Sbjct: 185 HGFVVKNGFEGNVFVVTGLVDMYAKCKCVSEAEFLFKGLEFDRKNHVLWTAMVTGYAQNG 244

Query: 87  MPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVG 146
               ++ F+ ++     +  + +T+  +L+A S+   R  G  +HG  + SG+GS+++V 
Sbjct: 245 DGYKAVEFFRYMHAQ-GVECNQYTFPTILTACSSVLARCFGEQVHGFIVKSGFGSNVYVQ 303

Query: 147 AALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGT 206
           +ALVD+Y K   +K+A+ + + M + D V WNS++ G +++   ++++ +F +M      
Sbjct: 304 SALVDMYAKCGDLKNAKNMLETMEDDDVVSWNSLMVGFVRHGLEEEALRLFKNM-HGRNM 362

Query: 207 WLDSTSVAAVLP--AVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERA 264
            +D  +  +VL    V  +        +  L +K GF ++  V   LV  Y+K G+++ A
Sbjct: 363 KIDDYTFPSVLNCCVVGSINP----KSVHGLIIKTGFENYKLVSNALVDMYAKTGDMDCA 418

Query: 265 ELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPF 324
             +F  ++  D+IS  ++++GY  N   E SL++F  +  +    +   +  ++      
Sbjct: 419 YTVFEKMLEKDVISWTSLVTGYAQNNSHEESLKIFCDMRVTGVNPDQFIVASILSACAEL 478

Query: 325 GHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMI 384
             L     +H   +KSG+  + SV  +L  +Y++   ++ A  +F     K + +W A+I
Sbjct: 479 TLLEFGKQVHLDFIKSGLRWSQSVYNSLVAMYAKCGCLDDADAIFVSMQVKDVITWTAII 538

Query: 385 AGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLG-KWVHELVKSRNF 443
            GY QNG    ++  +  M +S   P+ +T   +L AC+  G +  G K+  ++ K    
Sbjct: 539 VGYAQNGKGRNSLKFYDAMVSSGTRPDFITFIGLLFACSHAGLVDEGRKYFQQMNKVYGI 598

Query: 444 ESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVT-WNTMISGYGLH 491
           +        +ID++ + G + EA++L D M  K + T W +++S   +H
Sbjct: 599 KPGPEHYACMIDLFGRSGKLDEAKQLLDQMDVKPDATVWKSLLSACRVH 647



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 78/265 (29%), Positives = 120/265 (45%), Gaps = 35/265 (13%)

Query: 357 SRLNEMEAARKLFDESSEKSLASWNAMIA------------------------------- 385
           S+  ++  ARKLFD+  +K   SWN MI+                               
Sbjct: 76  SKSGQVNDARKLFDKMPQKDEYSWNTMISSYVNVGRLVEARELFDGCSCKSSITWSSIIS 135

Query: 386 GYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFES 445
           GY + G   EA  LF+ M+      +  T+ S+L  C+ LG I  G+ +H  V    FE 
Sbjct: 136 GYCKFGCKVEAFDLFRSMRLEGWKASQFTLGSVLRVCSSLGLIQTGEMIHGFVVKNGFEG 195

Query: 446 NIYVSTALIDMYAKCGNIVEARELFDLM--SHKSEVTWNTMISGYGLHGHGLEALQLFSE 503
           N++V T L+DMYAKC  + EA  LF  +    K+ V W  M++GY  +G G +A++ F  
Sbjct: 196 NVFVVTGLVDMYAKCKCVSEAEFLFKGLEFDRKNHVLWTAMVTGYAQNGDGYKAVEFFRY 255

Query: 504 MLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAG 563
           M   G+  +  TF ++L ACS   L R   E     I   GF       + +VD+  + G
Sbjct: 256 MHAQGVECNQYTFPTILTACSSV-LARCFGEQVHGFIVKSGFGSNVYVQSALVDMYAKCG 314

Query: 564 QLEKALEFIKGLAVEPGPAVWGALL 588
            L+ A   ++ +  +     W +L+
Sbjct: 315 DLKNAKNMLETME-DDDVVSWNSLM 338



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 51/179 (28%), Positives = 78/179 (43%), Gaps = 34/179 (18%)

Query: 442 NFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMIS--------------- 486
           ++ES IY +  L++  +K G + +AR+LFD M  K E +WNTMIS               
Sbjct: 61  SYES-IYQTNQLLNQLSKSGQVNDARKLFDKMPQKDEYSWNTMISSYVNVGRLVEARELF 119

Query: 487 ----------------GYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVR 530
                           GY   G  +EA  LF  M   G + S  T  SVL  CS  GL++
Sbjct: 120 DGCSCKSSITWSSIISGYCKFGCKVEAFDLFRSMRLEGWKASQFTLGSVLRVCSSLGLIQ 179

Query: 531 EGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVE-PGPAVWGALL 588
            G E+    +  +GF+        +VD+  +   + +A    KGL  +     +W A++
Sbjct: 180 TG-EMIHGFVVKNGFEGNVFVVTGLVDMYAKCKCVSEAEFLFKGLEFDRKNHVLWTAMV 237


>gi|92870988|gb|ABE80149.1| Tetratricopeptide-like helical [Medicago truncatula]
          Length = 766

 Score =  483 bits (1242), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 266/725 (36%), Positives = 406/725 (56%), Gaps = 57/725 (7%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           AR LF  +P+ DLF +NV++ G+  N       C     R+   L P+    S+      
Sbjct: 99  ARNLFDQMPERDLFSWNVMLTGYVRN-------CRLGDARRLFDLMPEKDVVSW------ 145

Query: 120 ACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNS 179
                        ++++SGY  +               +V  AR+VFD MPEK+++ WN 
Sbjct: 146 -------------NSLLSGYAQN--------------GYVDEAREVFDNMPEKNSISWNG 178

Query: 180 MISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKL 239
           +++  + N   +++  +F     +   W D  S   ++     V++ +LG + + L  K+
Sbjct: 179 LLAAYVHNGRIEEACLLF----ESKSDW-DLISWNCLMGGF--VRKKKLG-DARWLFDKM 230

Query: 240 GFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLF 299
              D +   T ++S Y++ G + +A  LF +    D+ +  AM+SGY  NG  + +   F
Sbjct: 231 PVRDAISWNT-MISGYAQGGGLSQARRLFDESPTRDVFTWTAMVSGYVQNGMLDEAKTFF 289

Query: 300 RQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRL 359
            ++    E   ++ I G +              I     +S    N S    + T Y ++
Sbjct: 290 DEMPEKNEVSYNAMIAGYVQT--------KKMDIARELFESMPCRNISSWNTMITGYGQI 341

Query: 360 NEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSIL 419
            ++  ARK FD   ++   SW A+IAGY Q+G  EEA+++F E++    + N  T    L
Sbjct: 342 GDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGESLNRATFGCAL 401

Query: 420 SACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEV 479
           S CA + A+ LGK +H       + +  +V  AL+ MY KCG+I EA + F+ +  K  V
Sbjct: 402 STCADIAALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKDVV 461

Query: 480 TWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSM 539
           +WNTM++GY  HG G +AL +F  M  +G++P  +T + VL ACSH GL+  G E F SM
Sbjct: 462 SWNTMLAGYARHGFGRQALTVFESMKTAGVKPDEITMVGVLSACSHTGLLDRGTEYFYSM 521

Query: 540 IHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNL 599
             D+G  P ++HY CM+D+LGRAG+LE+A + I+ +  +PG A WGALLGA  IH +T L
Sbjct: 522 TKDYGVIPTSKHYTCMIDLLGRAGRLEEAQDLIRNMPFQPGAASWGALLGASRIHGNTEL 581

Query: 600 ARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGG 659
              A+E +F+++P+N G +VLLSN+Y+A   ++ A  +R  ++   + K PG + +EV  
Sbjct: 582 GEKAAEMVFKMEPQNSGMYVLLSNLYAASGRWVDADKMRSKMRDIGVQKVPGYSWVEVQN 641

Query: 660 TPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEK 719
             H F+ GD  HP+   IYA LE+L+ KMRE G+ + T   LHDVEEEEKE M+K HSEK
Sbjct: 642 KIHTFSVGDCSHPEKERIYAYLEELDLKMREEGYVSLTKLVLHDVEEEEKEHMLKYHSEK 701

Query: 720 LAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCS 779
           LA+AFG++    G  IR++KNLRVC DCH+A K ISK+ GR+I++RD++RFHHF  G CS
Sbjct: 702 LAVAFGILTIPGGRPIRVMKNLRVCEDCHSAIKHISKIVGRLIILRDSHRFHHFNEGFCS 761

Query: 780 CGDYW 784
           CGDYW
Sbjct: 762 CGDYW 766



 Score = 89.4 bits (220), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 71/266 (26%), Positives = 123/266 (46%), Gaps = 20/266 (7%)

Query: 274 PDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCI 333
           PD++  N  IS +  NG  +S+L +F  +     R +S +   +I  +      +L   +
Sbjct: 47  PDILKWNKAISTHMRNGHCDSALHVFNTM----PRRSSVSYNAMISGYLRNSKFNLARNL 102

Query: 334 HSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLT 393
                +  + S + +LT     Y R   +  AR+LFD   EK + SWN++++GY QNG  
Sbjct: 103 FDQMPERDLFSWNVMLTG----YVRNCRLGDARRLFDLMPEKDVVSWNSLLSGYAQNGYV 158

Query: 394 EEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTAL 453
           +EA  +F  M       N ++ + +L+A    G I     + E  KS   + ++     L
Sbjct: 159 DEAREVFDNMPEK----NSISWNGLLAAYVHNGRIEEACLLFE-SKS---DWDLISWNCL 210

Query: 454 IDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSG 513
           +  + +   + +AR LFD M  +  ++WNTMISGY   G   +A +LF E     +    
Sbjct: 211 MGGFVRKKKLGDARWLFDKMPVRDAISWNTMISGYAQGGGLSQARRLFDESPTRDV---- 266

Query: 514 VTFLSVLYACSHAGLVREGDEIFQSM 539
            T+ +++      G++ E    F  M
Sbjct: 267 FTWTAMVSGYVQNGMLDEAKTFFDEM 292



 Score = 89.4 bits (220), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 74/260 (28%), Positives = 121/260 (46%), Gaps = 30/260 (11%)

Query: 252 VSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNS 311
           +S + + G  + A  +F  + R   +S NAMISGY  N K   +  LF Q+    ER   
Sbjct: 56  ISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQM---PERDLF 112

Query: 312 STIVGLIPVFYPFGHLHLTNC-------IHSFCLKSGIVSNSSVLTALSTVYSRLNEMEA 364
           S  V L          ++ NC       +     +  +VS +S+L+     Y++   ++ 
Sbjct: 113 SWNVMLTG--------YVRNCRLGDARRLFDLMPEKDVVSWNSLLSG----YAQNGYVDE 160

Query: 365 ARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQ 424
           AR++FD   EK+  SWN ++A Y  NG  EEA  LF+    SK   + ++ + ++    +
Sbjct: 161 AREVFDNMPEKNSISWNGLLAAYVHNGRIEEACLLFE----SKSDWDLISWNCLMGGFVR 216

Query: 425 LGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTM 484
              +   +W+ + +  R+  S       +I  YA+ G + +AR LFD    +   TW  M
Sbjct: 217 KKKLGDARWLFDKMPVRDAIS----WNTMISGYAQGGGLSQARRLFDESPTRDVFTWTAM 272

Query: 485 ISGYGLHGHGLEALQLFSEM 504
           +SGY  +G   EA   F EM
Sbjct: 273 VSGYVQNGMLDEAKTFFDEM 292



 Score = 62.8 bits (151), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 39/165 (23%), Positives = 83/165 (50%), Gaps = 12/165 (7%)

Query: 374 EKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKW 433
           +  +  WN  I+ + +NG  + A+ +F  M       + V+ ++++S   +    +L + 
Sbjct: 46  DPDILKWNKAISTHMRNGHCDSALHVFNTMPRR----SSVSYNAMISGYLRNSKFNLARN 101

Query: 434 VHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGH 493
           + + +  R+    ++    ++  Y +   + +AR LFDLM  K  V+WN+++SGY  +G+
Sbjct: 102 LFDQMPERD----LFSWNVMLTGYVRNCRLGDARRLFDLMPEKDVVSWNSLLSGYAQNGY 157

Query: 494 GLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQS 538
             EA ++F  M       + +++  +L A  H G + E   +F+S
Sbjct: 158 VDEAREVFDNMPEK----NSISWNGLLAAYVHNGRIEEACLLFES 198


>gi|347954536|gb|AEP33768.1| organelle transcript processing 82, partial [Nasturtium officinale]
          Length = 670

 Score =  483 bits (1242), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 257/662 (38%), Positives = 385/662 (58%), Gaps = 34/662 (5%)

Query: 156 FSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAA 215
           F  +  A  VF+ + E + ++WN+M  G   +     ++ ++  M+ + G   +S +   
Sbjct: 10  FEGLPYAISVFETIQEPNLLIWNTMFRGHALSPDPVSALKLYVCMI-SLGLLPNSYTFPF 68

Query: 216 VLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFY-------------------- 255
           +L + A+++  + G++I    LKLG+   +YV T L+S Y                    
Sbjct: 69  LLKSCAKLKASKEGLQIHGHVLKLGYELDLYVHTSLISMYVQNERLEDAHKVFDRSSHRD 128

Query: 256 -----------SKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLA 304
                      +  G +E A  +F +I   D++S NAMISGY   G  + +L LF++++ 
Sbjct: 129 VVSYTALVTGYASRGYIESARNMFDEIPVKDVVSWNAMISGYVETGNYKEALELFKEMMK 188

Query: 305 SAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEA 364
           +  R + ST+V +I      G + L   +HS+    G  SN  ++ AL   YS+  EME 
Sbjct: 189 TNVRPDESTMVTVISASARSGSIELGRQVHSWIADHGFGSNLKIVNALIDFYSKCGEMET 248

Query: 365 ARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQ 424
           A  LF   S K + SWN +I GYT   L +EA+ LFQEM  S  +PN VT+ SIL ACA 
Sbjct: 249 ACGLFLGLSYKDVISWNILIGGYTHLNLYKEALLLFQEMLRSGESPNDVTMLSILHACAH 308

Query: 425 LGAISLGKWVHELVKSR--NFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWN 482
           LGAI +G+W+H  +  R     +   + T+LIDMY+KCG+I  A ++F+ M HKS   WN
Sbjct: 309 LGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYSKCGDIEAAHQVFNSMLHKSLPAWN 368

Query: 483 TMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHD 542
            MI G+ +HG    A  +FS M  + I+P  +TF+ +L ACSHAG++  G  IF+SM H+
Sbjct: 369 AMIFGFAMHGRANAAFDIFSRMRKNEIKPDDITFVGLLSACSHAGMLDLGRHIFRSMTHN 428

Query: 543 HGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARV 602
           +   P  EHY CM+D+LG +G  ++A E I  + +EP   +W +LL AC +H +  L   
Sbjct: 429 YKITPKLEHYGCMIDLLGHSGLFKEAEEMISTMTMEPDGVIWCSLLKACKMHGNVELGEK 488

Query: 603 ASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPH 662
            ++ LF+++P N G +VLLSNIY+    + + A +R ++  + + K PGC+ IE+    H
Sbjct: 489 FAQNLFKIEPNNPGSYVLLSNIYATAGRWNEVARIRGLLNDKGMKKVPGCSSIEIDSVVH 548

Query: 663 VFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAI 722
            F  GD+ HP++  IY MLE++   ++EAGF  +T   L ++EEE KE  ++ HSEKLAI
Sbjct: 549 EFIIGDKFHPRNREIYGMLEEMEVLLQEAGFVPDTSEVLQEMEEEFKEGALRHHSEKLAI 608

Query: 723 AFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGD 782
           AFGLI+T+P T++ I+KNLRVC +CH ATK ISK+  R I+ RD  RFHHF+ GVCSC D
Sbjct: 609 AFGLISTKPETKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCND 668

Query: 783 YW 784
           YW
Sbjct: 669 YW 670



 Score =  223 bits (567), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 158/598 (26%), Positives = 295/598 (49%), Gaps = 52/598 (8%)

Query: 54  FKATCYARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSF 113
           F+   YA ++F +I +P+L ++N + RG + +  P S++  Y  +  +  L P+++T+ F
Sbjct: 10  FEGLPYAISVFETIQEPNLLIWNTMFRGHALSPDPVSALKLYVCM-ISLGLLPNSYTFPF 68

Query: 114 VLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFK------------------ 155
           +L + +       G+ +HGH +  GY  DL+V  +L+ +Y +                  
Sbjct: 69  LLKSCAKLKASKEGLQIHGHVLKLGYELDLYVHTSLISMYVQNERLEDAHKVFDRSSHRD 128

Query: 156 -------------FSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVR 202
                          +++SAR +FD++P KD V WN+MISG ++   +++++ +F +M++
Sbjct: 129 VVSYTALVTGYASRGYIESARNMFDEIPVKDVVSWNAMISGYVETGNYKEALELFKEMMK 188

Query: 203 NGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVE 262
                 D +++  V+ A A    + LG ++       GF  ++ ++  L+ FYSKCGE+E
Sbjct: 189 TN-VRPDESTMVTVISASARSGSIELGRQVHSWIADHGFGSNLKIVNALIDFYSKCGEME 247

Query: 263 RAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFY 322
            A  LF  +   D+IS N +I GYT     + +L LF+++L S E  N  T++ ++    
Sbjct: 248 TACGLFLGLSYKDVISWNILIGGYTHLNLYKEALLLFQEMLRSGESPNDVTMLSILHACA 307

Query: 323 PFGHLHLTNCIHSFCLK--SGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASW 380
             G + +   IH +  K   G+ + SS+ T+L  +YS+  ++EAA ++F+    KSL +W
Sbjct: 308 HLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYSKCGDIEAAHQVFNSMLHKSLPAW 367

Query: 381 NAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWV-HELVK 439
           NAMI G+  +G    A  +F  M+ +++ P+ +T   +LSAC+  G + LG+ +   +  
Sbjct: 368 NAMIFGFAMHGRANAAFDIFSRMRKNEIKPDDITFVGLLSACSHAGMLDLGRHIFRSMTH 427

Query: 440 SRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSE-VTWNTMISGYGLHGHGLEAL 498
           +      +     +ID+    G   EA E+   M+ + + V W +++    +HG+ +E  
Sbjct: 428 NYKITPKLEHYGCMIDLLGHSGLFKEAEEMISTMTMEPDGVIWCSLLKACKMHGN-VELG 486

Query: 499 QLFSEMLH--SGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMV 556
           + F++ L       P     LS +YA   AG   E   I + +++D G K +    +  +
Sbjct: 487 EKFAQNLFKIEPNNPGSYVLLSNIYAT--AGRWNEVARI-RGLLNDKGMKKVPGCSSIEI 543

Query: 557 DILGRAGQLEKALEFIKGLAVEP-GPAVWGALLGACMIHKDTNLARVASEKLFELDPE 613
           D +          EFI G    P    ++G L    ++ ++       SE L E++ E
Sbjct: 544 DSV--------VHEFIIGDKFHPRNREIYGMLEEMEVLLQEAGFVPDTSEVLQEMEEE 593



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 52/212 (24%), Positives = 99/212 (46%), Gaps = 12/212 (5%)

Query: 27  QTHAQIIIHGFQNDLSTVTKLAHRLSDFKATC----YARALFFSIPKPDLFLFNVIIRGF 82
           Q H+ I  HGF ++L    K+ + L DF + C     A  LF  +   D+  +N++I G+
Sbjct: 216 QVHSWIADHGFGSNL----KIVNALIDFYSKCGEMETACGLFLGLSYKDVISWNILIGGY 271

Query: 83  SNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGH--AIVSGYG 140
           ++  + K ++  +  + + +  +P++ T   +L A +      IG  +H +    + G  
Sbjct: 272 THLNLYKEALLLFQEMLR-SGESPNDVTMLSILHACAHLGAIDIGRWIHVYIDKRLKGVT 330

Query: 141 SDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDM 200
           +   +  +L+D+Y K   +++A +VF+ M  K    WN+MI G   +     +  +F  M
Sbjct: 331 NASSLRTSLIDMYSKCGDIEAAHQVFNSMLHKSLPAWNAMIFGFAMHGRANAAFDIFSRM 390

Query: 201 VRNGGTWLDSTSVAAVLPAVAEVQELRLGMEI 232
            +N     D  +   +L A +    L LG  I
Sbjct: 391 RKN-EIKPDDITFVGLLSACSHAGMLDLGRHI 421


>gi|357521591|ref|XP_003631084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355525106|gb|AET05560.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 980

 Score =  483 bits (1242), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 266/725 (36%), Positives = 406/725 (56%), Gaps = 57/725 (7%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           AR LF  +P+ DLF +NV++ G+  N       C     R+   L P+    S+      
Sbjct: 99  ARNLFDQMPERDLFSWNVMLTGYVRN-------CRLGDARRLFDLMPEKDVVSW------ 145

Query: 120 ACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNS 179
                        ++++SGY  +               +V  AR+VFD MPEK+++ WN 
Sbjct: 146 -------------NSLLSGYAQN--------------GYVDEAREVFDNMPEKNSISWNG 178

Query: 180 MISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKL 239
           +++  + N   +++  +F     +   W D  S   ++     V++ +LG + + L  K+
Sbjct: 179 LLAAYVHNGRIEEACLLF----ESKSDW-DLISWNCLMGGF--VRKKKLG-DARWLFDKM 230

Query: 240 GFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLF 299
              D +   T ++S Y++ G + +A  LF +    D+ +  AM+SGY  NG  + +   F
Sbjct: 231 PVRDAISWNT-MISGYAQGGGLSQARRLFDESPTRDVFTWTAMVSGYVQNGMLDEAKTFF 289

Query: 300 RQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRL 359
            ++    E   ++ I G +              I     +S    N S    + T Y ++
Sbjct: 290 DEMPEKNEVSYNAMIAGYVQT--------KKMDIARELFESMPCRNISSWNTMITGYGQI 341

Query: 360 NEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSIL 419
            ++  ARK FD   ++   SW A+IAGY Q+G  EEA+++F E++    + N  T    L
Sbjct: 342 GDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGESLNRATFGCAL 401

Query: 420 SACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEV 479
           S CA + A+ LGK +H       + +  +V  AL+ MY KCG+I EA + F+ +  K  V
Sbjct: 402 STCADIAALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKDVV 461

Query: 480 TWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSM 539
           +WNTM++GY  HG G +AL +F  M  +G++P  +T + VL ACSH GL+  G E F SM
Sbjct: 462 SWNTMLAGYARHGFGRQALTVFESMKTAGVKPDEITMVGVLSACSHTGLLDRGTEYFYSM 521

Query: 540 IHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNL 599
             D+G  P ++HY CM+D+LGRAG+LE+A + I+ +  +PG A WGALLGA  IH +T L
Sbjct: 522 TKDYGVIPTSKHYTCMIDLLGRAGRLEEAQDLIRNMPFQPGAASWGALLGASRIHGNTEL 581

Query: 600 ARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGG 659
              A+E +F+++P+N G +VLLSN+Y+A   ++ A  +R  ++   + K PG + +EV  
Sbjct: 582 GEKAAEMVFKMEPQNSGMYVLLSNLYAASGRWVDADKMRSKMRDIGVQKVPGYSWVEVQN 641

Query: 660 TPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEK 719
             H F+ GD  HP+   IYA LE+L+ KMRE G+ + T   LHDVEEEEKE M+K HSEK
Sbjct: 642 KIHTFSVGDCSHPEKERIYAYLEELDLKMREEGYVSLTKLVLHDVEEEEKEHMLKYHSEK 701

Query: 720 LAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCS 779
           LA+AFG++    G  IR++KNLRVC DCH+A K ISK+ GR+I++RD++RFHHF  G CS
Sbjct: 702 LAVAFGILTIPGGRPIRVMKNLRVCEDCHSAIKHISKIVGRLIILRDSHRFHHFNEGFCS 761

Query: 780 CGDYW 784
           CGDYW
Sbjct: 762 CGDYW 766



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 83/261 (31%), Positives = 124/261 (47%), Gaps = 57/261 (21%)

Query: 525 HAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVW 584
           + GL+  G E F  M  ++   P ++HY CM+D+LGR  +LE+                 
Sbjct: 776 YTGLLDTGAEYFYPMNEEYSVTPTSKHYTCMIDLLGRVDRLEE----------------- 818

Query: 585 GALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKR 644
           GALLGA  IH +T L   A++  F++ P+N G                  + +R V    
Sbjct: 819 GALLGASRIHGNTELGEKAAQMFFKMGPQNSG-----------------ISKMRDV---- 857

Query: 645 KLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDV 704
            + K PG +  EV    H F+ G  L  +   I   LE+L+ KMRE   + E        
Sbjct: 858 GVQKVPGYSWFEVQNKIHTFSVGLFLSRERENI-GFLEELDLKMREREEEKERT------ 910

Query: 705 EEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKN-LRVCLDCHTATKFISKVTGRVIV 763
                   +K  SE LA A G++    G   R++K  + VC DC +A K +SK+ GR+I 
Sbjct: 911 --------LKYLSENLAAALGILTIPVGRPNRVMKKRVYVCEDCRSAIKHMSKIVGRLIT 962

Query: 764 VRDANRFHHFKGGVCSCGDYW 784
           +RD++RF+     +CSCG+YW
Sbjct: 963 LRDSHRFNE---SICSCGEYW 980



 Score = 89.4 bits (220), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 71/266 (26%), Positives = 123/266 (46%), Gaps = 20/266 (7%)

Query: 274 PDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCI 333
           PD++  N  IS +  NG  +S+L +F  +     R +S +   +I  +      +L   +
Sbjct: 47  PDILKWNKAISTHMRNGHCDSALHVFNTM----PRRSSVSYNAMISGYLRNSKFNLARNL 102

Query: 334 HSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLT 393
                +  + S + +LT     Y R   +  AR+LFD   EK + SWN++++GY QNG  
Sbjct: 103 FDQMPERDLFSWNVMLTG----YVRNCRLGDARRLFDLMPEKDVVSWNSLLSGYAQNGYV 158

Query: 394 EEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTAL 453
           +EA  +F  M       N ++ + +L+A    G I     + E  KS   + ++     L
Sbjct: 159 DEAREVFDNMPEK----NSISWNGLLAAYVHNGRIEEACLLFE-SKS---DWDLISWNCL 210

Query: 454 IDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSG 513
           +  + +   + +AR LFD M  +  ++WNTMISGY   G   +A +LF E     +    
Sbjct: 211 MGGFVRKKKLGDARWLFDKMPVRDAISWNTMISGYAQGGGLSQARRLFDESPTRDV---- 266

Query: 514 VTFLSVLYACSHAGLVREGDEIFQSM 539
            T+ +++      G++ E    F  M
Sbjct: 267 FTWTAMVSGYVQNGMLDEAKTFFDEM 292



 Score = 89.4 bits (220), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 74/260 (28%), Positives = 121/260 (46%), Gaps = 30/260 (11%)

Query: 252 VSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNS 311
           +S + + G  + A  +F  + R   +S NAMISGY  N K   +  LF Q+    ER   
Sbjct: 56  ISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQM---PERDLF 112

Query: 312 STIVGLIPVFYPFGHLHLTNC-------IHSFCLKSGIVSNSSVLTALSTVYSRLNEMEA 364
           S  V L          ++ NC       +     +  +VS +S+L+     Y++   ++ 
Sbjct: 113 SWNVMLTG--------YVRNCRLGDARRLFDLMPEKDVVSWNSLLSG----YAQNGYVDE 160

Query: 365 ARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQ 424
           AR++FD   EK+  SWN ++A Y  NG  EEA  LF+    SK   + ++ + ++    +
Sbjct: 161 AREVFDNMPEKNSISWNGLLAAYVHNGRIEEACLLFE----SKSDWDLISWNCLMGGFVR 216

Query: 425 LGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTM 484
              +   +W+ + +  R+  S       +I  YA+ G + +AR LFD    +   TW  M
Sbjct: 217 KKKLGDARWLFDKMPVRDAIS----WNTMISGYAQGGGLSQARRLFDESPTRDVFTWTAM 272

Query: 485 ISGYGLHGHGLEALQLFSEM 504
           +SGY  +G   EA   F EM
Sbjct: 273 VSGYVQNGMLDEAKTFFDEM 292



 Score = 62.8 bits (151), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 39/165 (23%), Positives = 83/165 (50%), Gaps = 12/165 (7%)

Query: 374 EKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKW 433
           +  +  WN  I+ + +NG  + A+ +F  M       + V+ ++++S   +    +L + 
Sbjct: 46  DPDILKWNKAISTHMRNGHCDSALHVFNTMPRR----SSVSYNAMISGYLRNSKFNLARN 101

Query: 434 VHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGH 493
           + + +  R+    ++    ++  Y +   + +AR LFDLM  K  V+WN+++SGY  +G+
Sbjct: 102 LFDQMPERD----LFSWNVMLTGYVRNCRLGDARRLFDLMPEKDVVSWNSLLSGYAQNGY 157

Query: 494 GLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQS 538
             EA ++F  M       + +++  +L A  H G + E   +F+S
Sbjct: 158 VDEAREVFDNMPEK----NSISWNGLLAAYVHNGRIEEACLLFES 198


>gi|359497772|ref|XP_003635637.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like, partial [Vitis vinifera]
          Length = 629

 Score =  483 bits (1242), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 250/627 (39%), Positives = 385/627 (61%), Gaps = 5/627 (0%)

Query: 162 ARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVA 221
           A KVFDKMPE++ V W  MI+   +  C +D+I +F DM  +G    D  + ++VL A  
Sbjct: 4   AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYV-PDRFTYSSVLSACT 62

Query: 222 EVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKC---GEVERAELLFRDIVRPDLIS 278
           E+  L LG ++    ++LG    V V   LV  Y+KC   G V+ +  +F  +   +++S
Sbjct: 63  ELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMS 122

Query: 279 CNAMISGYTCNGKTE-SSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFC 337
             A+I+ Y  +G+ +  ++ LF ++++   R N  +   ++         +    ++S+ 
Sbjct: 123 WTAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYA 182

Query: 338 LKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAI 397
           +K GI S + V  +L ++Y+R   ME ARK FD   EK+L S+NA++ GY +N  +EEA 
Sbjct: 183 VKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAF 242

Query: 398 SLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMY 457
            LF E+  + +  +  T +S+LS  A +GA+  G+ +H  +    ++SN  +  ALI MY
Sbjct: 243 LLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMY 302

Query: 458 AKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFL 517
           ++CGNI  A ++F+ M  ++ ++W +MI+G+  HG    AL++F +ML +G +P+ +T++
Sbjct: 303 SRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYV 362

Query: 518 SVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAV 577
           +VL ACSH G++ EG + F SM  +HG  P  EHYACMVD+LGR+G L +A+EFI  + +
Sbjct: 363 AVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPL 422

Query: 578 EPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATV 637
                VW  LLGAC +H +T L R A+E + E +P++   ++LLSN++++   +     +
Sbjct: 423 MADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKI 482

Query: 638 RQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTET 697
           R+ +K+R L K  GC+ IEV    H F  G+  HPQ+  IY  L++L  K++E G+  +T
Sbjct: 483 RKSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQLASKIKEMGYIPDT 542

Query: 698 VTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKV 757
              LHD+EEE+KE  +  HSEK+A+AFGLI+T     IRI KNLRVC DCHTA K+IS  
Sbjct: 543 DFVLHDIEEEQKEQFLFQHSEKIAVAFGLISTSQSKPIRIFKNLRVCGDCHTAIKYISMA 602

Query: 758 TGRVIVVRDANRFHHFKGGVCSCGDYW 784
           TGR IVVRD+NRFHH K GVCSC DYW
Sbjct: 603 TGREIVVRDSNRFHHIKNGVCSCNDYW 629



 Score =  197 bits (502), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 138/489 (28%), Positives = 249/489 (50%), Gaps = 15/489 (3%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           A  +F  +P+ +L  + ++I  F+     + +I  +  +   +   PD FTYS VLSA +
Sbjct: 4   AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMEL-SGYVPDRFTYSSVLSACT 62

Query: 120 ACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSW---VKSARKVFDKMPEKDTVL 176
                ++G  LH   I  G   D+ VG +LVD+Y K +    V  +RKVF++MPE + + 
Sbjct: 63  ELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMS 122

Query: 177 WNSMISGLMKNC-CFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCL 235
           W ++I+   ++  C +++I +F  M+ +G    +  S ++VL A   + +   G ++   
Sbjct: 123 WTAIITAYAQSGECDKEAIELFCKMI-SGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSY 181

Query: 236 GLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESS 295
            +KLG      V   L+S Y++ G +E A   F  +   +L+S NA++ GY  N K+E +
Sbjct: 182 AVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEA 241

Query: 296 LRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTV 355
             LF ++  +   +++ T   L+      G +     IH   LK G  SN  +  AL ++
Sbjct: 242 FLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISM 301

Query: 356 YSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTV 415
           YSR   +EAA ++F+E  ++++ SW +MI G+ ++G    A+ +F +M  +   PN +T 
Sbjct: 302 YSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITY 361

Query: 416 SSILSACAQLGAISLG-KWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMS 474
            ++LSAC+ +G IS G K  + + K       +     ++D+  + G +VEA E  + M 
Sbjct: 362 VAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMP 421

Query: 475 HKSE-VTWNTMISGYGLHGH---GLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVR 530
             ++ + W T++    +HG+   G  A ++  E       P+    LS L+A   AG  +
Sbjct: 422 LMADALVWRTLLGACRVHGNTELGRHAAEMILE--QEPDDPAAYILLSNLHA--SAGQWK 477

Query: 531 EGDEIFQSM 539
           +  +I +SM
Sbjct: 478 DVVKIRKSM 486



 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 76/300 (25%), Positives = 151/300 (50%), Gaps = 14/300 (4%)

Query: 27  QTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYA-------RALFFSIPKPDLFLFNVII 79
           Q H+++I  G   D+     L     D  A C A       R +F  +P+ ++  +  II
Sbjct: 72  QLHSRVIRLGLALDVCVGCSLV----DMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAII 127

Query: 80  RGFSNN-EMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSG 138
             ++ + E  K +I  +  +     + P++F++S VL A     D   G  ++ +A+  G
Sbjct: 128 TAYAQSGECDKEAIELFCKMISGH-IRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLG 186

Query: 139 YGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFG 198
             S   VG +L+ +Y +   ++ ARK FD + EK+ V +N+++ G  KN   +++  +F 
Sbjct: 187 IASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFN 246

Query: 199 DMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKC 258
           + + + G  + + + A++L   A +  +  G +I    LK G+  +  +   L+S YS+C
Sbjct: 247 E-IADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRC 305

Query: 259 GEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLI 318
           G +E A  +F ++   ++IS  +MI+G+  +G    +L +F ++L +  + N  T V ++
Sbjct: 306 GNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVL 365


>gi|357480897|ref|XP_003610734.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355512069|gb|AES93692.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 726

 Score =  482 bits (1241), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 240/651 (36%), Positives = 378/651 (58%), Gaps = 31/651 (4%)

Query: 165 VFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQ 224
           VF ++P   T   N ++  L ++   + +I+++ ++       LD  S  ++L AV++V 
Sbjct: 76  VFSQIPNPHTHFSNQLLRHLSRSSFPEKTIFLYHNLRAINAFALDRFSFPSLLKAVSKVS 135

Query: 225 ELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMIS 284
               G+EI  L  KLGF D  ++ TGL++ Y+ C  +  A LLF  +  PD ++ N +I 
Sbjct: 136 AFNHGLEIHGLASKLGFVDDPFIQTGLIAMYASCRRIMDARLLFDKMCHPDAVAWNMIID 195

Query: 285 GYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVS 344
           GY  NG  + +LRLF  + +S  + +S  +  ++      G+L     IH F   +G   
Sbjct: 196 GYCQNGHYDDALRLFEDMRSSDMKPDSVILCTVLSACGHAGNLSYGRTIHEFVKDNGYAI 255

Query: 345 NSSVLTALSTVYSRLNEMEAARK-------------------------------LFDESS 373
           +S + TAL  +Y+    M+ ARK                               +FD+  
Sbjct: 256 DSHLQTALINMYANCGAMDLARKIYDGLSSKHLIVSTAMLSGYAKLGMVKDARFIFDQMI 315

Query: 374 EKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKW 433
           E+ L  W+AMI+GY ++   +EA+ LF EM   +  P+ +T+ S++SAC+ +GA++   W
Sbjct: 316 ERDLVCWSAMISGYAESDQPQEALKLFDEMLQKRSVPDQITMLSVISACSHVGALAQANW 375

Query: 434 VHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGH 493
           +H  V    F   + V+ ALIDMYAKCGN+V+ARE+F+ M  K+ ++W++MI+ + +HG+
Sbjct: 376 IHTYVDRSGFGRALSVNNALIDMYAKCGNLVKAREVFENMPRKNVISWSSMINAFAMHGN 435

Query: 494 GLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYA 553
              A++LF  M    I P+GVTF+ VLYAC HAGLV EG+++F SMI++HG  P  EHY 
Sbjct: 436 ADSAIKLFRRMKEVNIEPNGVTFIGVLYACGHAGLVEEGEKLFSSMINEHGISPTREHYG 495

Query: 554 CMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPE 613
           CMVD+  RA  L KA+E I+ +   P   +WG+L+ AC +H +  L   A+++L EL+P+
Sbjct: 496 CMVDLYCRANFLRKAIELIETMPFAPNVIIWGSLMSACQVHGEAELGEFAAKRLLELEPD 555

Query: 614 NVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQ 673
           + G  V+LSNIY+ E+ +     +R+ +  + ++K    + IE+    H+F   D+ H Q
Sbjct: 556 HDGALVVLSNIYAKEKRWNDVGLIRKSMSYKGISKEKASSRIEINNQVHMFMMADRYHKQ 615

Query: 674 STAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGT 733
           S  IY  L+++  K++  G++  T   L D+EEE+K+ ++  HSEKLA+ +GLI+    +
Sbjct: 616 SDEIYEKLDEVVSKLKLVGYKPSTSGILIDLEEEDKKELVLWHSEKLAVCYGLISRRNES 675

Query: 734 EIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
            IRI+KNLR+C DCH+  K +SKV    IVVRD  RFHH  GG+CSC DYW
Sbjct: 676 CIRIVKNLRICEDCHSFMKLVSKVYQIEIVVRDRTRFHHCSGGICSCRDYW 726



 Score =  187 bits (476), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 136/508 (26%), Positives = 230/508 (45%), Gaps = 40/508 (7%)

Query: 24  QLTQTHAQIIIHGF--QNDLSTVTKLAHRLSDFKATCYARA----LFFSIPKPDLFLFNV 77
            L Q HAQI+      +N  + ++KLA  +    ++  +      +F  IP P     N 
Sbjct: 31  HLKQIHAQILHSNTTPENTNTLLSKLALSICTLSSSSSSLHYALSVFSQIPNPHTHFSNQ 90

Query: 78  IIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVS 137
           ++R  S +  P+ +I  Y +LR   A   D F++  +L A S     + G+ +HG A   
Sbjct: 91  LLRHLSRSSFPEKTIFLYHNLRAINAFALDRFSFPSLLKAVSKVSAFNHGLEIHGLASKL 150

Query: 138 GYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVF 197
           G+  D F+   L+ +Y     +  AR +FDKM   D V WN +I G  +N  + D++ +F
Sbjct: 151 GFVDDPFIQTGLIAMYASCRRIMDARLLFDKMCHPDAVAWNMIIDGYCQNGHYDDALRLF 210

Query: 198 GDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQ------------------------ 233
            DM R+     DS  +  VL A      L  G  I                         
Sbjct: 211 EDM-RSSDMKPDSVILCTVLSACGHAGNLSYGRTIHEFVKDNGYAIDSHLQTALINMYAN 269

Query: 234 --CLGLKLGFHD-----HVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGY 286
              + L    +D     H+ V T ++S Y+K G V+ A  +F  ++  DL+  +AMISGY
Sbjct: 270 CGAMDLARKIYDGLSSKHLIVSTAMLSGYAKLGMVKDARFIFDQMIERDLVCWSAMISGY 329

Query: 287 TCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNS 346
             + + + +L+LF ++L      +  T++ +I      G L   N IH++  +SG     
Sbjct: 330 AESDQPQEALKLFDEMLQKRSVPDQITMLSVISACSHVGALAQANWIHTYVDRSGFGRAL 389

Query: 347 SVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQAS 406
           SV  AL  +Y++   +  AR++F+    K++ SW++MI  +  +G  + AI LF+ M+  
Sbjct: 390 SVNNALIDMYAKCGNLVKAREVFENMPRKNVISWSSMINAFAMHGNADSAIKLFRRMKEV 449

Query: 407 KVAPNPVTVSSILSACAQLGAISLG-KWVHELVKSRNFESNIYVSTALIDMYAKCGNIVE 465
            + PN VT   +L AC   G +  G K    ++              ++D+Y +   + +
Sbjct: 450 NIEPNGVTFIGVLYACGHAGLVEEGEKLFSSMINEHGISPTREHYGCMVDLYCRANFLRK 509

Query: 466 ARELFDLMSHKSEV-TWNTMISGYGLHG 492
           A EL + M     V  W +++S   +HG
Sbjct: 510 AIELIETMPFAPNVIIWGSLMSACQVHG 537


>gi|356513929|ref|XP_003525660.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Glycine max]
          Length = 736

 Score =  482 bits (1241), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 268/714 (37%), Positives = 388/714 (54%), Gaps = 50/714 (7%)

Query: 115 LSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALV---------DLYFKFSWVKSARKV 165
           L+  + C D      +H   I SG  + LF  + L+         DL +  S   S   +
Sbjct: 29  LNLLAKCPDIPSLKQIHSLIIKSGLHNTLFAQSKLIEFCALSPSRDLSYALSLFHS---I 85

Query: 166 FDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQE 225
             + P  +  +WN++I           S+ +F  M+ +G  + +S +  ++  + A+ + 
Sbjct: 86  HHQPP--NIFIWNTLIRAHSLTPTPTSSLHLFSQMLHSG-LYPNSHTFPSLFKSCAKSKA 142

Query: 226 LRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAEL------------------- 266
                ++    LKL  H H +V T L+  YS+ GE+  A L                   
Sbjct: 143 THEAKQLHAHALKLALHLHPHVHTSLIHMYSQVGELRHARLVFDKSTLRDAVSFTALITG 202

Query: 267 ------------LFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTI 314
                       LF +I   D++S NAMI+GY  +G+ E +L  F ++  +    N ST+
Sbjct: 203 YVSEGHVDDARRLFDEIPAKDVVSWNAMIAGYVQSGRFEEALACFTRMQEADVSPNQSTM 262

Query: 315 VGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSE 374
           V ++        L L   I S+    G   N  ++ AL  +YS+  E+  ARKLFD   +
Sbjct: 263 VSVLSACGHLRSLELGKWIGSWVRDRGFGKNLQLVNALVDMYSKCGEIGTARKLFDGMED 322

Query: 375 KSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWV 434
           K +  WN MI GY    L EEA+ LF+ M    V PN VT  ++L ACA LGA+ LGKWV
Sbjct: 323 KDVILWNTMIGGYCHLSLYEEALVLFEVMLRENVTPNDVTFLAVLPACASLGALDLGKWV 382

Query: 435 HELV----KSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGL 490
           H  +    K     +N+ + T++I MYAKCG +  A ++F  M  +S  +WN MISG  +
Sbjct: 383 HAYIDKNLKGTGNVNNVSLWTSIIVMYAKCGCVEVAEQVFRSMGSRSLASWNAMISGLAM 442

Query: 491 HGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAE 550
           +GH   AL LF EM++ G +P  +TF+ VL AC+ AG V  G   F SM  D+G  P  +
Sbjct: 443 NGHAERALGLFEEMINEGFQPDDITFVGVLSACTQAGFVELGHRYFSSMNKDYGISPKLQ 502

Query: 551 HYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFEL 610
           HY CM+D+L R+G+ ++A   +  + +EP  A+WG+LL AC IH         +E+LFEL
Sbjct: 503 HYGCMIDLLARSGKFDEAKVLMGNMEMEPDGAIWGSLLNACRIHGQVEFGEYVAERLFEL 562

Query: 611 DPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQL 670
           +PEN G +VLLSNIY+    +   A +R  +  + + K PGCT IE+ G  H F  GD+ 
Sbjct: 563 EPENSGAYVLLSNIYAGAGRWDDVAKIRTKLNDKGMKKVPGCTSIEIDGVVHEFLVGDKF 622

Query: 671 HPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATE 730
           HPQS  I+ ML++++  + E GF  +T   L+D++EE KE  +  HSEKLAIAFGLI+T+
Sbjct: 623 HPQSENIFRMLDEVDRLLEETGFVPDTSEVLYDMDEEWKEGALTQHSEKLAIAFGLISTK 682

Query: 731 PGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           PG+ IRI+KNLRVC +CH+ATK ISK+  R I+ RD NRFHHFK G CSC D W
Sbjct: 683 PGSTIRIVKNLRVCRNCHSATKLISKIFNREIIARDRNRFHHFKDGFCSCNDRW 736



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 122/416 (29%), Positives = 192/416 (46%), Gaps = 55/416 (13%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           AR LF  IP  D+  +N +I G+  +   + ++  +T +++   ++P+  T   VLSA  
Sbjct: 212 ARRLFDEIPAKDVVSWNAMIAGYVQSGRFEEALACFTRMQE-ADVSPNQSTMVSVLSACG 270

Query: 120 ACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNS 179
                 +G  +       G+G +L +  ALVD+Y K   + +ARK+FD M +KD +LWN+
Sbjct: 271 HLRSLELGKWIGSWVRDRGFGKNLQLVNALVDMYSKCGEIGTARKLFDGMEDKDVILWNT 330

Query: 180 MISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCL---G 236
           MI G      +++++ +F  M+R   T  D T + AVLPA A +  L LG  +       
Sbjct: 331 MIGGYCHLSLYEEALVLFEVMLRENVTPNDVTFL-AVLPACASLGALDLGKWVHAYIDKN 389

Query: 237 LK-LGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESS 295
           LK  G  ++V + T ++  Y+KCG VE AE +FR +    L S NAMISG   NG  E +
Sbjct: 390 LKGTGNVNNVSLWTSIIVMYAKCGCVEVAEQVFRSMGSRSLASWNAMISGLAMNGHAERA 449

Query: 296 LRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTV 355
           L LF +++    + +  T VG++                S C ++G V            
Sbjct: 450 LGLFEEMINEGFQPDDITFVGVL----------------SACTQAGFVELG------HRY 487

Query: 356 YSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTV 415
           +S +N+        D      L  +  MI    ++G  +EA  L   M+   + P+    
Sbjct: 488 FSSMNK--------DYGISPKLQHYGCMIDLLARSGKFDEAKVLMGNME---MEPDGAIW 536

Query: 416 SSILSACAQLGAISLGKWVHELVKSRNFE------------SNIYVSTALIDMYAK 459
            S+L+AC   G +  G++V E    R FE            SNIY      D  AK
Sbjct: 537 GSLLNACRIHGQVEFGEYVAE----RLFELEPENSGAYVLLSNIYAGAGRWDDVAK 588



 Score = 69.7 bits (169), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 62/265 (23%), Positives = 124/265 (46%), Gaps = 10/265 (3%)

Query: 36  GFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNEMPKSS-ICF 94
           GF  +L  V  L    S       AR LF  +   D+ L+N +I G+ +  + + + + F
Sbjct: 289 GFGKNLQLVNALVDMYSKCGEIGTARKLFDGMEDKDVILWNTMIGGYCHLSLYEEALVLF 348

Query: 95  YTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGH--AIVSGYG--SDLFVGAALV 150
              LR+N  +TP++ T+  VL A ++     +G  +H +    + G G  +++ +  +++
Sbjct: 349 EVMLREN--VTPNDVTFLAVLPACASLGALDLGKWVHAYIDKNLKGTGNVNNVSLWTSII 406

Query: 151 DLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDS 210
            +Y K   V+ A +VF  M  +    WN+MISGL  N   + ++ +F +M+ N G   D 
Sbjct: 407 VMYAKCGCVEVAEQVFRSMGSRSLASWNAMISGLAMNGHAERALGLFEEMI-NEGFQPDD 465

Query: 211 TSVAAVLPAVAEVQELRLGME-IQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFR 269
            +   VL A  +   + LG      +    G    +     ++   ++ G+ + A++L  
Sbjct: 466 ITFVGVLSACTQAGFVELGHRYFSSMNKDYGISPKLQHYGCMIDLLARSGKFDEAKVLMG 525

Query: 270 DI-VRPDLISCNAMISGYTCNGKTE 293
           ++ + PD     ++++    +G+ E
Sbjct: 526 NMEMEPDGAIWGSLLNACRIHGQVE 550


>gi|224082698|ref|XP_002306801.1| predicted protein [Populus trichocarpa]
 gi|222856250|gb|EEE93797.1| predicted protein [Populus trichocarpa]
          Length = 787

 Score =  482 bits (1240), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 273/764 (35%), Positives = 428/764 (56%), Gaps = 13/764 (1%)

Query: 27  QTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCY----ARALFFSI-PKPDLFLFNVIIRG 81
           + H  II  G+     ++  +A+ L    A C     AR LF  +  + D+  +N II  
Sbjct: 31  EIHGLIIKCGYD----SIVFVANSLVSMYAKCNDILGARKLFDRMNERNDVVSWNSIISA 86

Query: 82  FSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGS 141
           +S N     ++  +  ++K   +  + +T    L A      + +G+ +H   + S    
Sbjct: 87  YSLNGQCMEALGLFREMQK-AGVGANTYTLVAALQACEDSSFKKLGMEIHAAILKSNQVL 145

Query: 142 DLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMV 201
           D++V  ALV ++ +F  +  A ++FD++ EKD + WNSMI+G  +N  + +++  F  + 
Sbjct: 146 DVYVANALVAMHVRFGKMSYAARIFDELDEKDNITWNSMIAGFTQNGLYNEALQFFCGL- 204

Query: 202 RNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEV 261
           ++     D  S+ ++L A   +  L  G EI    +K     ++ +   L+  YSKC  V
Sbjct: 205 QDANLKPDEVSLISILAASGRLGYLLNGKEIHAYAMKNWLDSNLRIGNTLIDMYSKCCCV 264

Query: 262 ERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVF 321
             A L+F  ++  DLIS   +I+ Y  N     +L+L R++      V++  I   +   
Sbjct: 265 AYAGLVFDKMINKDLISWTTVIAAYAQNNCHTEALKLLRKVQTKGMDVDTMMIGSTLLAC 324

Query: 322 YPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWN 381
                L     +H + LK G+ S+  +   +  VY+    +  A ++F+    K + SW 
Sbjct: 325 SGLRCLSHAKEVHGYTLKRGL-SDLMMQNMIIDVYADCGNINYATRMFESIKCKDVVSWT 383

Query: 382 AMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSR 441
           +MI+ Y  NGL  EA+ +F  M+ + V P+ +T+ SILSA A L A++ GK +H  +  +
Sbjct: 384 SMISCYVHNGLANEALGVFYLMKETSVEPDSITLVSILSAAASLSALNKGKEIHGFIFRK 443

Query: 442 NFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLF 501
            F        +L+DMYA CG++  A ++F     KS V W TMI+ YG+HG G  A++LF
Sbjct: 444 GFMLEGSTVNSLVDMYACCGSLENAYKVFICTRSKSLVLWTTMINAYGMHGRGKAAVELF 503

Query: 502 SEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGR 561
           S M    + P  +TFL++LYACSH+GL+ EG  + ++M   +  +P  EHYAC+VD+LGR
Sbjct: 504 SIMEDQKLIPDHITFLALLYACSHSGLINEGKRLLETMKCKYQLEPWPEHYACLVDLLGR 563

Query: 562 AGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLL 621
           A  LE+A  F+K + +EP   VW A LGAC IH +  L  +A++KL +LDP++ G +VL+
Sbjct: 564 ANHLEEAYHFVKSMQIEPTAEVWCAFLGACRIHSNKKLGEIAAQKLLDLDPDSPGSYVLI 623

Query: 622 SNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAML 681
           SN+++A   +     VR  +K   L K PGC+ IEVG   H F   D+ HP+S  IY  L
Sbjct: 624 SNVFAASGRWKDVEEVRMRMKGGGLKKNPGCSWIEVGNKVHTFLVRDKSHPESYKIYQKL 683

Query: 682 EKLNGKM-REAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKN 740
            ++  K+ +E G+  +T   LH+V +EEK  M+  HSE+LAIA+GL++T  GT IRI KN
Sbjct: 684 AQITEKLEKEGGYVPQTKLVLHNVGKEEKVQMLYGHSERLAIAYGLMSTSEGTPIRITKN 743

Query: 741 LRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           LRVC+DCHT  K +SK   R ++VRDA+RFHHF+ GVCSCGD+W
Sbjct: 744 LRVCVDCHTFCKLVSKFFERELIVRDASRFHHFEDGVCSCGDFW 787



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 145/463 (31%), Positives = 236/463 (50%), Gaps = 4/463 (0%)

Query: 107 DNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVF 166
           D+FT+  VL A     D   G  +HG  I  GY S +FV  +LV +Y K + +  ARK+F
Sbjct: 9   DSFTFPCVLKACGVVEDIHRGAEIHGLIIKCGYDSIVFVANSLVSMYAKCNDILGARKLF 68

Query: 167 DKMPEK-DTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQE 225
           D+M E+ D V WNS+IS    N    +++ +F +M +  G   ++ ++ A L A  +   
Sbjct: 69  DRMNERNDVVSWNSIISAYSLNGQCMEALGLFREM-QKAGVGANTYTLVAALQACEDSSF 127

Query: 226 LRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISG 285
            +LGMEI    LK      VYV   LV+ + + G++  A  +F ++   D I+ N+MI+G
Sbjct: 128 KKLGMEIHAAILKSNQVLDVYVANALVAMHVRFGKMSYAARIFDELDEKDNITWNSMIAG 187

Query: 286 YTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSN 345
           +T NG    +L+ F  L  +  + +  +++ ++      G+L     IH++ +K+ + SN
Sbjct: 188 FTQNGLYNEALQFFCGLQDANLKPDEVSLISILAASGRLGYLLNGKEIHAYAMKNWLDSN 247

Query: 346 SSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQA 405
             +   L  +YS+   +  A  +FD+   K L SW  +IA Y QN    EA+ L +++Q 
Sbjct: 248 LRIGNTLIDMYSKCCCVAYAGLVFDKMINKDLISWTTVIAAYAQNNCHTEALKLLRKVQT 307

Query: 406 SKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVE 465
             +  + + + S L AC+ L  +S  K VH     R   S++ +   +ID+YA CGNI  
Sbjct: 308 KGMDVDTMMIGSTLLACSGLRCLSHAKEVHGYTLKRGL-SDLMMQNMIIDVYADCGNINY 366

Query: 466 ARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSH 525
           A  +F+ +  K  V+W +MIS Y  +G   EAL +F  M  + + P  +T +S+L A + 
Sbjct: 367 ATRMFESIKCKDVVSWTSMISCYVHNGLANEALGVFYLMKETSVEPDSITLVSILSAAAS 426

Query: 526 AGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKA 568
              + +G EI    I   GF         +VD+    G LE A
Sbjct: 427 LSALNKGKEI-HGFIFRKGFMLEGSTVNSLVDMYACCGSLENA 468



 Score =  189 bits (479), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 120/352 (34%), Positives = 185/352 (52%), Gaps = 14/352 (3%)

Query: 205 GTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERA 264
           G   DS +   VL A   V+++  G EI  L +K G+   V+V   LVS Y+KC ++  A
Sbjct: 5   GVPFDSFTFPCVLKACGVVEDIHRGAEIHGLIIKCGYDSIVFVANSLVSMYAKCNDILGA 64

Query: 265 ELLF-RDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYP 323
             LF R   R D++S N++IS Y+ NG+   +L LFR++  +    N+ T+V  +     
Sbjct: 65  RKLFDRMNERNDVVSWNSIISAYSLNGQCMEALGLFREMQKAGVGANTYTLVAALQACED 124

Query: 324 FGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAM 383
                L   IH+  LKS  V +  V  AL  ++ R  +M  A ++FDE  EK   +WN+M
Sbjct: 125 SSFKKLGMEIHAAILKSNQVLDVYVANALVAMHVRFGKMSYAARIFDELDEKDNITWNSM 184

Query: 384 IAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNF 443
           IAG+TQNGL  EA+  F  +Q + + P+ V++ SIL+A  +LG +  GK +H        
Sbjct: 185 IAGFTQNGLYNEALQFFCGLQDANLKPDEVSLISILAASGRLGYLLNGKEIHAYAMKNWL 244

Query: 444 ESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSE 503
           +SN+ +   LIDMY+KC  +  A  +FD M +K  ++W T+I+ Y  +    EAL+L  +
Sbjct: 245 DSNLRIGNTLIDMYSKCCCVAYAGLVFDKMINKDLISWTTVIAAYAQNNCHTEALKLLRK 304

Query: 504 MLHSGIRPSGVTFLSVLYACS-----------HAGLVREG--DEIFQSMIHD 542
           +   G+    +   S L ACS           H   ++ G  D + Q+MI D
Sbjct: 305 VQTKGMDVDTMMIGSTLLACSGLRCLSHAKEVHGYTLKRGLSDLMMQNMIID 356


>gi|414865780|tpg|DAA44337.1| TPA: hypothetical protein ZEAMMB73_255594 [Zea mays]
          Length = 665

 Score =  482 bits (1240), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 246/620 (39%), Positives = 361/620 (58%), Gaps = 35/620 (5%)

Query: 167 DKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDM-VRNGGTWLDSTSVAAVLPAVAEVQE 225
           D      TV +N +I  L  +   +D++ +F  M  R    + D  +    L + +  ++
Sbjct: 79  DGRSRTTTVCFNVLIRALTASSLHRDALVLFASMRPRGPACFPDHYTYPLALKSCSASKD 138

Query: 226 LRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISG 285
           L LG++I     KL    +VYV    +S YS+CG  E A  +F  +   D++S NAMI+G
Sbjct: 139 LLLGLQIHSAVAKLRLDRNVYVAHSAISMYSRCGRPEDAYRVFDGMPHRDVVSWNAMIAG 198

Query: 286 YTCNGKTESSLRLFRQLLA-SAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVS 344
           +   G  + ++ +F+Q +       ++ T+ G++P         + N             
Sbjct: 199 FARVGLFDRAIEVFKQFVVLQGSMPDAGTMAGILPA--------MGN------------- 237

Query: 345 NSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQ 404
                       ++ +++   R++FD    K L SWNAM+A Y  N    +A+ LF  M+
Sbjct: 238 ------------AKPDDIRFVRRVFDNMQFKELISWNAMLAVYANNEFHVKAVELFMLME 285

Query: 405 ASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIV 464
             +V P+ +T++++L  C +L A S+GK +HE++K +N   N+ +  AL+DMYA CG + 
Sbjct: 286 KDEVEPDSITLATVLPPCGELSAFSVGKRIHEIIKRKNMCPNLLLENALMDMYASCGCLK 345

Query: 465 EARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACS 524
           +ARE+FDLMS +  ++W ++IS YG HGHG EA+ LF +ML  G+ P  + F++VL ACS
Sbjct: 346 DAREIFDLMSARDVISWTSIISAYGKHGHGREAVDLFEKMLGQGLEPDSIAFVAVLAACS 405

Query: 525 HAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVW 584
           HAGL+ +G   F SM   +   P AEHY CMVD+LGRAG + +A +FI  + +EP   VW
Sbjct: 406 HAGLLADGKHYFDSMTSRYHIIPKAEHYTCMVDLLGRAGCINEAYDFITTMLIEPNERVW 465

Query: 585 GALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKR 644
           GALL AC IH + ++  VA++ LF L PE  GY+VLLSN+Y+    +    +VR V+  +
Sbjct: 466 GALLQACRIHSNMDIGLVAADNLFSLVPEQTGYYVLLSNMYARAGRWADVTSVRSVMVNK 525

Query: 645 KLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDV 704
            + K PG +++E+G   H F  GD+ HPQS  IY  L++L GK+R  G+  E    LHDV
Sbjct: 526 GIKKFPGTSIVELGDQVHTFHIGDRCHPQSEMIYHKLDELLGKIRGMGYNPEVEATLHDV 585

Query: 705 EEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVV 764
           EEE+KE  + VHSEKLAIAF L+ T PGT IR+  NLR C DCH A K IS +T R IV+
Sbjct: 586 EEEDKEDHLSVHSEKLAIAFLLLNTSPGTIIRVTMNLRTCSDCHLAAKLISIITCREIVL 645

Query: 765 RDANRFHHFKGGVCSCGDYW 784
           +D NR HH   GVCSCGDYW
Sbjct: 646 KDTNRIHHIVQGVCSCGDYW 665



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 98/420 (23%), Positives = 191/420 (45%), Gaps = 36/420 (8%)

Query: 75  FNVIIRGFSNNEMPKSSICFYTHLR-KNTALTPDNFTYSFVLSAASACCDRSIGVLLHGH 133
           FNV+IR  + + + + ++  +  +R +  A  PD++TY   L + SA  D  +G+ +H  
Sbjct: 89  FNVLIRALTASSLHRDALVLFASMRPRGPACFPDHYTYPLALKSCSASKDLLLGLQIHSA 148

Query: 134 AIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDS 193
                   +++V  + + +Y +    + A +VFD MP +D V WN+MI+G  +   F  +
Sbjct: 149 VAKLRLDRNVYVAHSAISMYSRCGRPEDAYRVFDGMPHRDVVSWNAMIAGFARVGLFDRA 208

Query: 194 IWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVS 253
           I VF   V   G+  D+ ++A +LPA+                                 
Sbjct: 209 IEVFKQFVVLQGSMPDAGTMAGILPAMGN------------------------------- 237

Query: 254 FYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSST 313
             +K  ++     +F ++   +LIS NAM++ Y  N     ++ LF  +       +S T
Sbjct: 238 --AKPDDIRFVRRVFDNMQFKELISWNAMLAVYANNEFHVKAVELFMLMEKDEVEPDSIT 295

Query: 314 IVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESS 373
           +  ++P         +   IH    +  +  N  +  AL  +Y+    ++ AR++FD  S
Sbjct: 296 LATVLPPCGELSAFSVGKRIHEIIKRKNMCPNLLLENALMDMYASCGCLKDAREIFDLMS 355

Query: 374 EKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKW 433
            + + SW ++I+ Y ++G   EA+ LF++M    + P+ +   ++L+AC+  G ++ GK 
Sbjct: 356 ARDVISWTSIISAYGKHGHGREAVDLFEKMLGQGLEPDSIAFVAVLAACSHAGLLADGKH 415

Query: 434 VHELVKSR-NFESNIYVSTALIDMYAKCGNIVEARELFDLM-SHKSEVTWNTMISGYGLH 491
             + + SR +        T ++D+  + G I EA +    M    +E  W  ++    +H
Sbjct: 416 YFDSMTSRYHIIPKAEHYTCMVDLLGRAGCINEAYDFITTMLIEPNERVWGALLQACRIH 475


>gi|296090723|emb|CBI41122.3| unnamed protein product [Vitis vinifera]
          Length = 634

 Score =  482 bits (1240), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 250/627 (39%), Positives = 385/627 (61%), Gaps = 5/627 (0%)

Query: 162 ARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVA 221
           A KVFDKMPE++ V W  MI+   +  C +D+I +F DM  +G    D  + ++VL A  
Sbjct: 9   AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYV-PDRFTYSSVLSACT 67

Query: 222 EVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKC---GEVERAELLFRDIVRPDLIS 278
           E+  L LG ++    ++LG    V V   LV  Y+KC   G V+ +  +F  +   +++S
Sbjct: 68  ELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMS 127

Query: 279 CNAMISGYTCNGKTE-SSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFC 337
             A+I+ Y  +G+ +  ++ LF ++++   R N  +   ++         +    ++S+ 
Sbjct: 128 WTAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYA 187

Query: 338 LKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAI 397
           +K GI S + V  +L ++Y+R   ME ARK FD   EK+L S+NA++ GY +N  +EEA 
Sbjct: 188 VKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAF 247

Query: 398 SLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMY 457
            LF E+  + +  +  T +S+LS  A +GA+  G+ +H  +    ++SN  +  ALI MY
Sbjct: 248 LLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMY 307

Query: 458 AKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFL 517
           ++CGNI  A ++F+ M  ++ ++W +MI+G+  HG    AL++F +ML +G +P+ +T++
Sbjct: 308 SRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYV 367

Query: 518 SVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAV 577
           +VL ACSH G++ EG + F SM  +HG  P  EHYACMVD+LGR+G L +A+EFI  + +
Sbjct: 368 AVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPL 427

Query: 578 EPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATV 637
                VW  LLGAC +H +T L R A+E + E +P++   ++LLSN++++   +     +
Sbjct: 428 MADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKI 487

Query: 638 RQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTET 697
           R+ +K+R L K  GC+ IEV    H F  G+  HPQ+  IY  L++L  K++E G+  +T
Sbjct: 488 RKSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQLASKIKEMGYIPDT 547

Query: 698 VTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKV 757
              LHD+EEE+KE  +  HSEK+A+AFGLI+T     IRI KNLRVC DCHTA K+IS  
Sbjct: 548 DFVLHDIEEEQKEQFLFQHSEKIAVAFGLISTSQSKPIRIFKNLRVCGDCHTAIKYISMA 607

Query: 758 TGRVIVVRDANRFHHFKGGVCSCGDYW 784
           TGR IVVRD+NRFHH K GVCSC DYW
Sbjct: 608 TGREIVVRDSNRFHHIKNGVCSCNDYW 634



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 138/489 (28%), Positives = 249/489 (50%), Gaps = 15/489 (3%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           A  +F  +P+ +L  + ++I  F+     + +I  +  +   +   PD FTYS VLSA +
Sbjct: 9   AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMEL-SGYVPDRFTYSSVLSACT 67

Query: 120 ACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSW---VKSARKVFDKMPEKDTVL 176
                ++G  LH   I  G   D+ VG +LVD+Y K +    V  +RKVF++MPE + + 
Sbjct: 68  ELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMS 127

Query: 177 WNSMISGLMKNC-CFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCL 235
           W ++I+   ++  C +++I +F  M+ +G    +  S ++VL A   + +   G ++   
Sbjct: 128 WTAIITAYAQSGECDKEAIELFCKMI-SGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSY 186

Query: 236 GLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESS 295
            +KLG      V   L+S Y++ G +E A   F  +   +L+S NA++ GY  N K+E +
Sbjct: 187 AVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEA 246

Query: 296 LRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTV 355
             LF ++  +   +++ T   L+      G +     IH   LK G  SN  +  AL ++
Sbjct: 247 FLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISM 306

Query: 356 YSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTV 415
           YSR   +EAA ++F+E  ++++ SW +MI G+ ++G    A+ +F +M  +   PN +T 
Sbjct: 307 YSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITY 366

Query: 416 SSILSACAQLGAISLG-KWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMS 474
            ++LSAC+ +G IS G K  + + K       +     ++D+  + G +VEA E  + M 
Sbjct: 367 VAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMP 426

Query: 475 HKSE-VTWNTMISGYGLHGH---GLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVR 530
             ++ + W T++    +HG+   G  A ++  E       P+    LS L+A   AG  +
Sbjct: 427 LMADALVWRTLLGACRVHGNTELGRHAAEMILE--QEPDDPAAYILLSNLHA--SAGQWK 482

Query: 531 EGDEIFQSM 539
           +  +I +SM
Sbjct: 483 DVVKIRKSM 491



 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 76/300 (25%), Positives = 151/300 (50%), Gaps = 14/300 (4%)

Query: 27  QTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYA-------RALFFSIPKPDLFLFNVII 79
           Q H+++I  G   D+     L     D  A C A       R +F  +P+ ++  +  II
Sbjct: 77  QLHSRVIRLGLALDVCVGCSLV----DMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAII 132

Query: 80  RGFSNN-EMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSG 138
             ++ + E  K +I  +  +     + P++F++S VL A     D   G  ++ +A+  G
Sbjct: 133 TAYAQSGECDKEAIELFCKMISGH-IRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLG 191

Query: 139 YGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFG 198
             S   VG +L+ +Y +   ++ ARK FD + EK+ V +N+++ G  KN   +++  +F 
Sbjct: 192 IASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFN 251

Query: 199 DMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKC 258
           + + + G  + + + A++L   A +  +  G +I    LK G+  +  +   L+S YS+C
Sbjct: 252 E-IADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRC 310

Query: 259 GEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLI 318
           G +E A  +F ++   ++IS  +MI+G+  +G    +L +F ++L +  + N  T V ++
Sbjct: 311 GNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVL 370


>gi|357465899|ref|XP_003603234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355492282|gb|AES73485.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 973

 Score =  481 bits (1239), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 259/728 (35%), Positives = 414/728 (56%), Gaps = 5/728 (0%)

Query: 59  YARALFFSIPKPDLFLFNVIIRGF-SNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSA 117
           YA  LF      D+ ++N  +  +    E  ++  CF   ++  + +  D+ TY  +LS 
Sbjct: 249 YATKLFVCDDDSDVTVWNKTLSSYLQAGEGWEAVDCFRDMIK--SRVPCDSLTYIVILSV 306

Query: 118 ASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLW 177
            ++     +G  +HG  +  G+   + V  + +++Y K   V  AR++F +M E D + W
Sbjct: 307 VASLNHLELGKQIHGAVVRFGWDQFVSVANSAINMYVKAGSVNYARRMFGQMKEVDLISW 366

Query: 178 NSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELR-LGMEIQCLG 236
           N++ISG  ++   + S+ +F D++R+G    D  ++ +VL A + ++E   +G ++    
Sbjct: 367 NTVISGCARSGLEECSLRLFIDLLRSG-LLPDQFTITSVLRACSSLEESYCVGRQVHTCA 425

Query: 237 LKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSL 296
           LK G     +V T L+  YSK G++E AELLF +    DL S NAM+ G+T +     +L
Sbjct: 426 LKAGIVLDSFVSTALIDVYSKGGKMEEAELLFHNQDGFDLASWNAMMHGFTVSDNYREAL 485

Query: 297 RLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVY 356
           RLF  +    E+ +  T             L     IH+  +K     +  V++ +  +Y
Sbjct: 486 RLFSLMHERGEKADQITFANAAKAAGCLVRLQQGKQIHAVVIKMRFHYDLFVISGILDMY 545

Query: 357 SRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVS 416
            +  EM++ARK+F++       +W  +I+G  +NG  E+A+  + +M+ + V P+  T +
Sbjct: 546 LKCGEMKSARKVFNQIPSPDDVAWTTVISGCVENGEEEQALFTYHQMRLAGVQPDEYTFA 605

Query: 417 SILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHK 476
           +++ AC+ L A+  GK +H  +   N   + +V T+L+DMYAKCGNI +A  LF  M+ +
Sbjct: 606 TLVKACSLLTALEQGKQIHANIMKLNCAFDPFVMTSLVDMYAKCGNIEDAYGLFRRMNTR 665

Query: 477 SEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIF 536
           S   WN MI G   HG+  EAL  F+EM   G+ P  VTF+ VL ACSH+GL  +  + F
Sbjct: 666 SVALWNAMIVGLAQHGNAEEALNFFNEMKSRGVTPDRVTFIGVLSACSHSGLTSDAYKNF 725

Query: 537 QSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKD 596
            SM   +G +P  EHY+C+VD L RAG +++A + +  +  E    ++  LL AC +  D
Sbjct: 726 DSMQKTYGVEPEIEHYSCLVDALSRAGHIQEAEKVVSSMPFEASATMYRTLLNACRVQGD 785

Query: 597 TNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIE 656
                  +EKLF +DP +   +VLLSNIY+A   +  A + R ++K+  + K PG + I+
Sbjct: 786 KETGERVAEKLFTMDPSDSAAYVLLSNIYAAANQWENAVSARNMMKRVNVKKEPGFSWID 845

Query: 657 VGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVH 716
           +    H+F +GD+ H ++  IY  +E +  +++E G+  +T  AL D+EEE+KE  +  H
Sbjct: 846 MKNKVHLFVAGDRSHEETDLIYNKVEYVMKRIKEEGYVPDTEFALVDIEEEDKESALSYH 905

Query: 717 SEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGG 776
           SEKLAIA+GL+ T P T +R+IKNLRVC DCH A K+IS V  R IV+RDANRFHHF+ G
Sbjct: 906 SEKLAIAYGLMKTPPSTTLRVIKNLRVCGDCHNAIKYISNVFQREIVLRDANRFHHFRSG 965

Query: 777 VCSCGDYW 784
           +CSCGDYW
Sbjct: 966 ICSCGDYW 973



 Score =  189 bits (479), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 128/469 (27%), Positives = 233/469 (49%), Gaps = 5/469 (1%)

Query: 27  QTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNE 86
           Q H  ++  G+   +S      +      +  YAR +F  + + DL  +N +I G + + 
Sbjct: 318 QIHGAVVRFGWDQFVSVANSAINMYVKAGSVNYARRMFGQMKEVDLISWNTVISGCARSG 377

Query: 87  MPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDR-SIGVLLHGHAIVSGYGSDLFV 145
           + + S+  +  L + + L PD FT + VL A S+  +   +G  +H  A+ +G   D FV
Sbjct: 378 LEECSLRLFIDLLR-SGLLPDQFTITSVLRACSSLEESYCVGRQVHTCALKAGIVLDSFV 436

Query: 146 GAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGG 205
             AL+D+Y K   ++ A  +F      D   WN+M+ G   +  +++++ +F  ++   G
Sbjct: 437 STALIDVYSKGGKMEEAELLFHNQDGFDLASWNAMMHGFTVSDNYREALRLFS-LMHERG 495

Query: 206 TWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAE 265
              D  + A    A   +  L+ G +I  + +K+ FH  ++V++G++  Y KCGE++ A 
Sbjct: 496 EKADQITFANAAKAAGCLVRLQQGKQIHAVVIKMRFHYDLFVISGILDMYLKCGEMKSAR 555

Query: 266 LLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFG 325
            +F  I  PD ++   +ISG   NG+ E +L  + Q+  +  + +  T   L+       
Sbjct: 556 KVFNQIPSPDDVAWTTVISGCVENGEEEQALFTYHQMRLAGVQPDEYTFATLVKACSLLT 615

Query: 326 HLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIA 385
            L     IH+  +K     +  V+T+L  +Y++   +E A  LF   + +S+A WNAMI 
Sbjct: 616 ALEQGKQIHANIMKLNCAFDPFVMTSLVDMYAKCGNIEDAYGLFRRMNTRSVALWNAMIV 675

Query: 386 GYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLG-KWVHELVKSRNFE 444
           G  Q+G  EEA++ F EM++  V P+ VT   +LSAC+  G  S   K    + K+   E
Sbjct: 676 GLAQHGNAEEALNFFNEMKSRGVTPDRVTFIGVLSACSHSGLTSDAYKNFDSMQKTYGVE 735

Query: 445 SNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVT-WNTMISGYGLHG 492
             I   + L+D  ++ G+I EA ++   M  ++  T + T+++   + G
Sbjct: 736 PEIEHYSCLVDALSRAGHIQEAEKVVSSMPFEASATMYRTLLNACRVQG 784



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 172/666 (25%), Positives = 291/666 (43%), Gaps = 96/666 (14%)

Query: 12  FLSLLKGAKTQSQL---TQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIP 68
           + S+L+ A   S L    +THA I+  G   D      L    +   +   AR LF   P
Sbjct: 16  WFSILRHAIADSDLILGKRTHAVIVTSGLNPDRYVTNNLITMYAKCGSLFSARKLFDITP 75

Query: 69  KPD--LFLFNVIIRGFSN----NEMPKSSICFYTH--LRKNTALTPDNFTYSFVLSAASA 120
           + D  L  +N I+  +++    +++ K+   F+    LR++  LT  + T S +      
Sbjct: 76  QSDRDLVTYNAILAAYAHTGELHDVEKTHEAFHIFRLLRQSVMLTTRH-TLSPLFKLCLL 134

Query: 121 CCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSM 180
               S    L G+A+  G   D+FV  ALV++Y KF  ++ AR +FD+MP +D VLWN M
Sbjct: 135 YGSPSASEALQGYAVKIGLQWDVFVAGALVNIYAKFQRIREARVLFDRMPVRDVVLWNVM 194

Query: 181 ISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGME-IQCLGLKL 239
           +   ++     + + +F    R+ G   D  SV  +L  V +       +E ++    KL
Sbjct: 195 MKAYVEMGAGDEVLGLFSAFHRS-GLRPDCVSVRTILMGVGKKTVFERELEQVRAYATKL 253

Query: 240 GFHD---HVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISC----------------- 279
              D    V V    +S Y + GE   A   FRD+++   + C                 
Sbjct: 254 FVCDDDSDVTVWNKTLSSYLQAGEGWEAVDCFRDMIKSR-VPCDSLTYIVILSVVASLNH 312

Query: 280 -----------------------NAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIV- 315
                                  N+ I+ Y   G    + R+F Q +   + ++ +T++ 
Sbjct: 313 LELGKQIHGAVVRFGWDQFVSVANSAINMYVKAGSVNYARRMFGQ-MKEVDLISWNTVIS 371

Query: 316 ---------------------GLIP-------VFYPFGHLHLTNC----IHSFCLKSGIV 343
                                GL+P       V      L  + C    +H+  LK+GIV
Sbjct: 372 GCARSGLEECSLRLFIDLLRSGLLPDQFTITSVLRACSSLEESYCVGRQVHTCALKAGIV 431

Query: 344 SNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEM 403
            +S V TAL  VYS+  +ME A  LF       LASWNAM+ G+T +    EA+ LF  M
Sbjct: 432 LDSFVSTALIDVYSKGGKMEEAELLFHNQDGFDLASWNAMMHGFTVSDNYREALRLFSLM 491

Query: 404 QASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNI 463
                  + +T ++   A   L  +  GK +H +V    F  +++V + ++DMY KCG +
Sbjct: 492 HERGEKADQITFANAAKAAGCLVRLQQGKQIHAVVIKMRFHYDLFVISGILDMYLKCGEM 551

Query: 464 VEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYAC 523
             AR++F+ +    +V W T+ISG   +G   +AL  + +M  +G++P   TF +++ AC
Sbjct: 552 KSARKVFNQIPSPDDVAWTTVISGCVENGEEEQALFTYHQMRLAGVQPDEYTFATLVKAC 611

Query: 524 SHAGLVREGDEIFQSMIH-DHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPA 582
           S    + +G +I  +++  +  F P       +VD+  + G +E A    + +      A
Sbjct: 612 SLLTALEQGKQIHANIMKLNCAFDPFV--MTSLVDMYAKCGNIEDAYGLFRRMNTR-SVA 668

Query: 583 VWGALL 588
           +W A++
Sbjct: 669 LWNAMI 674



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 94/400 (23%), Positives = 169/400 (42%), Gaps = 50/400 (12%)

Query: 210 STSVAAVLP--------AVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEV 261
           S S +++LP        A+A+  +L LG     + +  G +   YV   L++ Y+KCG +
Sbjct: 6   SVSPSSLLPQWFSILRHAIAD-SDLILGKRTHAVIVTSGLNPDRYVTNNLITMYAKCGSL 64

Query: 262 ERAELLFRDIVRP---DLISCNAMISGYTCNG------KTESSLRLFRQLLASAERVNSS 312
             A  LF DI      DL++ NA+++ Y   G      KT  +  +FR L  S       
Sbjct: 65  FSARKLF-DITPQSDRDLVTYNAILAAYAHTGELHDVEKTHEAFHIFRLLRQSVMLTTRH 123

Query: 313 TIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDES 372
           T+  L  +   +G    +  +  + +K G+  +  V  AL  +Y++   +  AR LFD  
Sbjct: 124 TLSPLFKLCLLYGSPSASEALQGYAVKIGLQWDVFVAGALVNIYAKFQRIREARVLFDRM 183

Query: 373 SEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGK 432
             + +  WN M+  Y + G  +E + LF     S + P+ V+V +IL     +G      
Sbjct: 184 PVRDVVLWNVMMKAYVEMGAGDEVLGLFSAFHRSGLRPDCVSVRTIL-----MGVGKKTV 238

Query: 433 WVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVT-WNTMISGYGLH 491
           +  EL + R + + ++V          C +              S+VT WN  +S Y   
Sbjct: 239 FERELEQVRAYATKLFV----------CDD-------------DSDVTVWNKTLSSYLQA 275

Query: 492 GHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEH 551
           G G EA+  F +M+ S +    +T++ +L   +    +  G +I  +++   G+      
Sbjct: 276 GEGWEAVDCFRDMIKSRVPCDSLTYIVILSVVASLNHLELGKQIHGAVVR-FGWDQFVSV 334

Query: 552 YACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGAC 591
               +++  +AG +  A     G   E     W  ++  C
Sbjct: 335 ANSAINMYVKAGSVNYARRMF-GQMKEVDLISWNTVISGC 373


>gi|224068783|ref|XP_002302824.1| predicted protein [Populus trichocarpa]
 gi|222844550|gb|EEE82097.1| predicted protein [Populus trichocarpa]
          Length = 581

 Score =  481 bits (1238), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 238/581 (40%), Positives = 360/581 (61%), Gaps = 5/581 (0%)

Query: 205 GTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERA 264
           G   D+ +   ++ A + ++    G+ I    +K G+   V++   L++ Y KC + E +
Sbjct: 5   GIQPDNFTFPFIIKACSCLRHFEFGIRIHQDVVKFGYQSQVFISNSLITMYGKCDKYELS 64

Query: 265 ELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPF 324
             +F ++   + +S +A+I     + + +    LFRQ+L+   R +   I+  +      
Sbjct: 65  RQVFDEMPDKNAVSWSAIIGACLQDDRCKEGFSLFRQMLSEGSRPSRGAILNAMACVRSH 124

Query: 325 GHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMI 384
                 + ++   +++G+  + SV +A + +++R   +E ARKLFD    K L +W   I
Sbjct: 125 EE---ADDVYRVVVENGLDFDQSVQSAAAGMFARCGRVEVARKLFDGIMSKDLVTWATTI 181

Query: 385 AGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFE 444
             Y +  +  EA+ L ++M    + P+ +T+  ++ AC+ L +  L   VH ++ +  F 
Sbjct: 182 EAYVKADMPLEALGLLKQMMLQGIFPDAITLLGVIRACSTLASFQLAHIVHGIITTGFFY 241

Query: 445 SNIY-VSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSE 503
           + +  V TALID+Y KCG++  AR++FD M  ++ +TW+ MISGYG+HG G EAL LF +
Sbjct: 242 NQLLAVETALIDLYVKCGSLTYARKVFDGMQERNIITWSAMISGYGMHGWGREALNLFDQ 301

Query: 504 MLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAG 563
           M  + ++P  +TF+S+L ACSH+GLV EG E F SM  D G  P  EHYACMVDILGRAG
Sbjct: 302 M-KASVKPDHITFVSILSACSHSGLVAEGWECFNSMARDFGVTPRPEHYACMVDILGRAG 360

Query: 564 QLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSN 623
           +L++A +FI+ + V P  AVWGALLGAC IH + +LA + +  LF+LDP N G +V+L N
Sbjct: 361 KLDEACDFIERMPVRPNAAVWGALLGACRIHLNVDLAEMVARALFDLDPHNAGRYVILYN 420

Query: 624 IYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEK 683
           IY+      +A ++R ++K R + K  G ++IE+    + F +GD+ HPQ+  IY+ LE+
Sbjct: 421 IYTLTGKRKEADSIRTLMKNRGVKKIAGYSVIEIKNKLYAFVAGDRSHPQTDLIYSELER 480

Query: 684 LNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRV 743
           L  ++R+ G+  +    LHDV+EE KE M+ +HSEKLAI FGL+   PG+ IRI KNLRV
Sbjct: 481 LMDRIRQEGYTPDINFVLHDVDEETKESMLYLHSEKLAIVFGLLNLGPGSVIRIRKNLRV 540

Query: 744 CLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           C DCHTATKFISKVTGR IVVRDA+RFHHFK G CSC DYW
Sbjct: 541 CGDCHTATKFISKVTGREIVVRDAHRFHHFKNGACSCRDYW 581



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 117/453 (25%), Positives = 223/453 (49%), Gaps = 16/453 (3%)

Query: 103 ALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSA 162
            + PDNFT+ F++ A S       G+ +H   +  GY S +F+  +L+ +Y K    + +
Sbjct: 5   GIQPDNFTFPFIIKACSCLRHFEFGIRIHQDVVKFGYQSQVFISNSLITMYGKCDKYELS 64

Query: 163 RKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAE 222
           R+VFD+MP+K+ V W+++I   +++   ++   +F  M+  G       S  A+L A+A 
Sbjct: 65  RQVFDEMPDKNAVSWSAIIGACLQDDRCKEGFSLFRQMLSEGS----RPSRGAILNAMAC 120

Query: 223 VQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAM 282
           V+      ++  + ++ G      V +     +++CG VE A  LF  I+  DL++    
Sbjct: 121 VRSHEEADDVYRVVVENGLDFDQSVQSAAAGMFARCGRVEVARKLFDGIMSKDLVTWATT 180

Query: 283 ISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGI 342
           I  Y        +L L +Q++      ++ T++G+I          L + +H   + +G 
Sbjct: 181 IEAYVKADMPLEALGLLKQMMLQGIFPDAITLLGVIRACSTLASFQLAHIVHGI-ITTGF 239

Query: 343 VSNS--SVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLF 400
             N   +V TAL  +Y +   +  ARK+FD   E+++ +W+AMI+GY  +G   EA++LF
Sbjct: 240 FYNQLLAVETALIDLYVKCGSLTYARKVFDGMQERNIITWSAMISGYGMHGWGREALNLF 299

Query: 401 QEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVS--TALIDMYA 458
            +M+AS V P+ +T  SILSAC+  G ++ G W      +R+F           ++D+  
Sbjct: 300 DQMKAS-VKPDHITFVSILSACSHSGLVAEG-WECFNSMARDFGVTPRPEHYACMVDILG 357

Query: 459 KCGNIVEARELFDLMS-HKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFL 517
           + G + EA +  + M    +   W  ++    +H + ++  ++ +  L   + P      
Sbjct: 358 RAGKLDEACDFIERMPVRPNAAVWGALLGACRIHLN-VDLAEMVARALFD-LDPHNAGRY 415

Query: 518 SVLYAC-SHAGLVREGDEIFQSMIHDHGFKPLA 549
            +LY   +  G  +E D I ++++ + G K +A
Sbjct: 416 VILYNIYTLTGKRKEADSI-RTLMKNRGVKKIA 447


>gi|357516843|ref|XP_003628710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355522732|gb|AET03186.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 748

 Score =  481 bits (1238), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 248/675 (36%), Positives = 387/675 (57%), Gaps = 32/675 (4%)

Query: 142 DLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMV 201
           +L+    ++  Y K   V     +FD MP +D V WNS+ISG         S+  +  M+
Sbjct: 74  NLYSWNTILSAYSKLGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAYNLML 133

Query: 202 RNGGTW-LDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSK--- 257
           +N G++ L+  + + +L   ++   ++LG +I    +K GF  +V+V + LV  YSK   
Sbjct: 134 KNDGSFNLNRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKMGM 193

Query: 258 ----------------------------CGEVERAELLFRDIVRPDLISCNAMISGYTCN 289
                                       CG VE ++ LF ++   D IS  +MI+G+T N
Sbjct: 194 ISCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITGFTQN 253

Query: 290 GKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVL 349
           G    ++ +FR++     +++  T   ++        L     +H++ +++    N  V 
Sbjct: 254 GLDRDAIDIFREMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYKDNIFVA 313

Query: 350 TALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVA 409
           +AL  +Y +   +++A  +F + + K++ SW AM+ GY QNG +EEA+  F +MQ   + 
Sbjct: 314 SALVDMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGIE 373

Query: 410 PNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEAREL 469
           P+  T+ S++S+CA L ++  G   H    +    S I VS AL+ +Y KCG+I ++  L
Sbjct: 374 PDDFTLGSVISSCANLASLEEGAQFHARALTSGLISFITVSNALVTLYGKCGSIEDSHRL 433

Query: 470 FDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLV 529
           F+ +S K EVTW  ++SGY   G   E + LF  ML  G++P  VTF+ VL ACS AGLV
Sbjct: 434 FNEISFKDEVTWTALVSGYAQFGKANETIGLFESMLAHGLKPDKVTFIGVLSACSRAGLV 493

Query: 530 REGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLG 589
            +G++IF+SMI++HG  P+ +HY CM+D+  RAG++E+A  FI  +   P    W  LL 
Sbjct: 494 EKGNQIFESMINEHGIVPIQDHYTCMIDLFSRAGRIEEARNFINKMPFSPDAISWATLLS 553

Query: 590 ACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKA 649
           +C  + + ++ + A+E L ELDP N   +VLLS++Y+A+  + + A +R+ ++ + L K 
Sbjct: 554 SCRFYGNMDIGKWAAEFLMELDPHNTASYVLLSSVYAAKGKWEEVARLRKDMRDKGLRKE 613

Query: 650 PGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEK 709
           PGC+ I+     HVF++ D+ +P S  IY+ LEKLN KM + G+  +  + LHDV + EK
Sbjct: 614 PGCSWIKYKNQVHVFSADDKSNPFSDQIYSELEKLNYKMIKEGYVPDMNSVLHDVGDSEK 673

Query: 710 ELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANR 769
             M+  HSEKLAIAFGL+   PG  IR++KNLRVC DCH ATK+ISK+T R I+VRD  R
Sbjct: 674 IKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITNREILVRDTAR 733

Query: 770 FHHFKGGVCSCGDYW 784
           FH FK G CSCGD+W
Sbjct: 734 FHLFKDGTCSCGDFW 748



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 137/493 (27%), Positives = 246/493 (49%), Gaps = 40/493 (8%)

Query: 34  IHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSIC 93
           ++ +   LS  +KL  R+S+ +       LF ++P+ D   +N +I G++   +   S+ 
Sbjct: 75  LYSWNTILSAYSKLG-RVSEMEY------LFDAMPRRDGVSWNSLISGYAGCGLIYQSVK 127

Query: 94  FYTHLRKNT-ALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDL 152
            Y  + KN  +   +  T+S +L  AS      +G  +HGH +  G+ S +FVG+ LVD+
Sbjct: 128 AYNLMLKNDGSFNLNRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDM 187

Query: 153 YFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMV-RNGGTW---- 207
           Y K   +  ARKVFD++PEK+ V++N++I GLM+    +DS  +F +M  R+  +W    
Sbjct: 188 YSKMGMISCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMI 247

Query: 208 -------------------------LDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFH 242
                                    +D  +  +VL A   V  L+ G ++    ++  + 
Sbjct: 248 TGFTQNGLDRDAIDIFREMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYK 307

Query: 243 DHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQL 302
           D+++V + LV  Y KC  ++ AE +F+ +   +++S  AM+ GY  NG +E +++ F  +
Sbjct: 308 DNIFVASALVDMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDM 367

Query: 303 LASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEM 362
                  +  T+  +I        L      H+  L SG++S  +V  AL T+Y +   +
Sbjct: 368 QKYGIEPDDFTLGSVISSCANLASLEEGAQFHARALTSGLISFITVSNALVTLYGKCGSI 427

Query: 363 EAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSAC 422
           E + +LF+E S K   +W A+++GY Q G   E I LF+ M A  + P+ VT   +LSAC
Sbjct: 428 EDSHRLFNEISFKDEVTWTALVSGYAQFGKANETIGLFESMLAHGLKPDKVTFIGVLSAC 487

Query: 423 AQLGAISLGKWVHE-LVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSE-VT 480
           ++ G +  G  + E ++            T +ID++++ G I EAR   + M    + ++
Sbjct: 488 SRAGLVEKGNQIFESMINEHGIVPIQDHYTCMIDLFSRAGRIEEARNFINKMPFSPDAIS 547

Query: 481 WNTMISGYGLHGH 493
           W T++S    +G+
Sbjct: 548 WATLLSSCRFYGN 560



 Score =  181 bits (460), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 115/380 (30%), Positives = 189/380 (49%), Gaps = 35/380 (9%)

Query: 242 HDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQ 301
           H ++Y    ++S YSK G V   E LF  + R D +S N++ISGY   G    S++ +  
Sbjct: 72  HPNLYSWNTILSAYSKLGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAYNL 131

Query: 302 LLAS--AERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRL 359
           +L +  +  +N  T   L+ +    G + L   IH   +K G +S   V + L  +YS++
Sbjct: 132 MLKNDGSFNLNRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKM 191

Query: 360 NEMEAARKLFDESSEKSLA-------------------------------SWNAMIAGYT 388
             +  ARK+FDE  EK++                                SW +MI G+T
Sbjct: 192 GMISCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITGFT 251

Query: 389 QNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIY 448
           QNGL  +AI +F+EM+   +  +  T  S+L+AC  + A+  GK VH  +   +++ NI+
Sbjct: 252 QNGLDRDAIDIFREMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYKDNIF 311

Query: 449 VSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSG 508
           V++AL+DMY KC NI  A  +F  M+ K+ V+W  M+ GYG +G+  EA++ FS+M   G
Sbjct: 312 VASALVDMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYG 371

Query: 509 IRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKA 568
           I P   T  SV+ +C++   + EG + F +     G          +V + G+ G +E +
Sbjct: 372 IEPDDFTLGSVISSCANLASLEEGAQ-FHARALTSGLISFITVSNALVTLYGKCGSIEDS 430

Query: 569 LEFIKGLAVEPGPAVWGALL 588
                 ++ +     W AL+
Sbjct: 431 HRLFNEISFKD-EVTWTALV 449



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 72/320 (22%), Positives = 134/320 (41%), Gaps = 66/320 (20%)

Query: 333 IHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGL 392
           +HS  +K+     + +L  L + Y++L  +  A K+FD+    +L SWN +++ Y++ G 
Sbjct: 31  LHSHIIKTLPYPETFLLNNLISSYAKLGSIPYACKVFDQMPHPNLYSWNTILSAYSKLGR 90

Query: 393 TEEAISLFQEM----------------------QASKVAP-----------NPVTVSSIL 419
             E   LF  M                      Q+ K              N +T S++L
Sbjct: 91  VSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAYNLMLKNDGSFNLNRITFSTLL 150

Query: 420 SACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAK-------------------- 459
              ++ G + LG+ +H  V    F S ++V + L+DMY+K                    
Sbjct: 151 ILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKMGMISCARKVFDELPEKNVV 210

Query: 460 -----------CGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSG 508
                      CG + +++ LF  M  +  ++W +MI+G+  +G   +A+ +F EM    
Sbjct: 211 MYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITGFTQNGLDRDAIDIFREMKLEN 270

Query: 509 IRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKA 568
           ++    TF SVL AC     ++EG ++   +I    +K      + +VD+  +   ++ A
Sbjct: 271 LQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTD-YKDNIFVASALVDMYCKCKNIKSA 329

Query: 569 LEFIKGLAVEPGPAVWGALL 588
               K +  +     W A+L
Sbjct: 330 EAVFKKMTCK-NVVSWTAML 348



 Score = 73.2 bits (178), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 64/277 (23%), Positives = 126/277 (45%), Gaps = 10/277 (3%)

Query: 13  LSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDL 72
           L+   G     +  Q HA II   +++++   + L       K    A A+F  +   ++
Sbjct: 282 LTACGGVMALQEGKQVHAYIIRTDYKDNIFVASALVDMYCKCKNIKSAEAVFKKMTCKNV 341

Query: 73  FLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHG 132
             +  ++ G+  N   + ++  ++ ++K   + PD+FT   V+S+ +       G   H 
Sbjct: 342 VSWTAMLVGYGQNGYSEEAVKTFSDMQK-YGIEPDDFTLGSVISSCANLASLEEGAQFHA 400

Query: 133 HAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQD 192
            A+ SG  S + V  ALV LY K   ++ + ++F+++  KD V W +++SG  +     +
Sbjct: 401 RALTSGLISFITVSNALVTLYGKCGSIEDSHRLFNEISFKDEVTWTALVSGYAQFGKANE 460

Query: 193 SIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEI-QCLGLKLG---FHDHVYVL 248
           +I +F  M+ +G    D  +   VL A +    +  G +I + +  + G     DH    
Sbjct: 461 TIGLFESMLAHGLK-PDKVTFIGVLSACSRAGLVEKGNQIFESMINEHGIVPIQDH---Y 516

Query: 249 TGLVSFYSKCGEVERAELLFRDI-VRPDLISCNAMIS 284
           T ++  +S+ G +E A      +   PD IS   ++S
Sbjct: 517 TCMIDLFSRAGRIEEARNFINKMPFSPDAISWATLLS 553



 Score = 52.4 bits (124), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 35/119 (29%), Positives = 58/119 (48%), Gaps = 13/119 (10%)

Query: 435 HELVKSRNFESNI---------YVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMI 485
           H   K++N  S+I         ++   LI  YAK G+I  A ++FD M H +  +WNT++
Sbjct: 23  HNFTKAKNLHSHIIKTLPYPETFLLNNLISSYAKLGSIPYACKVFDQMPHPNLYSWNTIL 82

Query: 486 SGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHG 544
           S Y   G   E   LF  M     R  GV++ S++   +  GL+ +  + +  M+ + G
Sbjct: 83  SAYSKLGRVSEMEYLFDAM----PRRDGVSWNSLISGYAGCGLIYQSVKAYNLMLKNDG 137


>gi|359491499|ref|XP_003634283.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Vitis vinifera]
          Length = 766

 Score =  481 bits (1237), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 275/725 (37%), Positives = 401/725 (55%), Gaps = 57/725 (7%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           AR LF  +P  DL  +NV+I G             Y +LR    L  D      V+S   
Sbjct: 99  ARQLFEKMPTRDLVSWNVMISG----------CVRYRNLRA-ARLLFDQMPERDVVSW-- 145

Query: 120 ACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNS 179
                        +A++SGY  +               +VK A+++FD+MP K+++ WN 
Sbjct: 146 -------------NAMLSGYAQN--------------GYVKEAKEIFDEMPCKNSISWNG 178

Query: 180 MISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKL 239
           M++  ++N   +D+  +F     +   W +  S   ++    +   L   ++ + +  ++
Sbjct: 179 MLAAYVQNGRIEDARRLF----ESKADW-ELISWNCMMGGYVKRNRL---VDARGIFDRM 230

Query: 240 GFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLF 299
              D V   T ++S Y++ GE+  A+ LF +    D+ +  AM+SGY  NG  + + R+F
Sbjct: 231 PERDEVSWNT-MISGYAQNGELLEAQRLFEESPVRDVFTWTAMVSGYVQNGMLDEARRVF 289

Query: 300 RQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRL 359
             +       NS +   +I  +     +     +     ++    N S    + T Y++ 
Sbjct: 290 DGMPEK----NSVSWNAIIAGYVQCKRMDQAREL----FEAMPCQNVSSWNTMITGYAQN 341

Query: 360 NEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSIL 419
            ++  AR  FD   ++   SW A+IAGY Q+G  EEA+ LF EM+      N  T +S L
Sbjct: 342 GDIAQARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTL 401

Query: 420 SACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEV 479
           S CA++ A+ LGK VH  V     ES  YV  AL+ MY KCGNI +A  +F+ +  K  V
Sbjct: 402 STCAEIAALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIEEKEVV 461

Query: 480 TWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSM 539
           +WNTMI+GY  HG G EAL LF  M  +GI P  VT + VL ACSH GLV +G E F SM
Sbjct: 462 SWNTMIAGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLVDKGTEYFYSM 521

Query: 540 IHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNL 599
             D+G    ++HY CM+D+LGRAG+L+ A   +K +  EP  A WGALLGA  IH +T L
Sbjct: 522 TQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLGASRIHGNTEL 581

Query: 600 ARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGG 659
              A++ +FE++P+N G +VLLSN+Y+A   +     +R  ++ R + K PG + +EV  
Sbjct: 582 GEKAAKMIFEMEPDNSGMYVLLSNLYAASGRWGDVGRMRLRMRDRGVKKVPGYSWVEVQN 641

Query: 660 TPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEK 719
             H FT GD +HP+   IY  LE+L+ KM++ G+ + T   LHDVEEEEK  M+K HSEK
Sbjct: 642 KIHTFTVGDSVHPERDRIYTFLEELDLKMKKEGYVSSTKLVLHDVEEEEKVHMLKYHSEK 701

Query: 720 LAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCS 779
           LA+AFG++A   G  IR+IKNLRVC DCH A K ISK+ GR+I++RD++RFHHF GG CS
Sbjct: 702 LAVAFGILAIPAGRPIRVIKNLRVCEDCHNAMKHISKIVGRLIILRDSHRFHHFNGGQCS 761

Query: 780 CGDYW 784
           CGDYW
Sbjct: 762 CGDYW 766



 Score =  142 bits (357), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 101/376 (26%), Positives = 184/376 (48%), Gaps = 27/376 (7%)

Query: 161 SARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAV 220
           SA ++F+ MP + ++ WN+MISG + N  F  +  +F  M        D  S   ++   
Sbjct: 67  SALRLFNSMPRRSSISWNAMISGCLSNDKFYLARQLFEKMPTR-----DLVSWNVMISGC 121

Query: 221 AEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCN 280
              + LR     + L  ++   D V     ++S Y++ G V+ A+ +F ++   + IS N
Sbjct: 122 VRYRNLRAA---RLLFDQMPERD-VVSWNAMLSGYAQNGYVKEAKEIFDEMPCKNSISWN 177

Query: 281 AMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKS 340
            M++ Y  NG+ E + RLF +  A  E ++ + ++G        G++     + +  +  
Sbjct: 178 GMLAAYVQNGRIEDARRLF-ESKADWELISWNCMMG--------GYVKRNRLVDARGIFD 228

Query: 341 GIVSNSSV-LTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISL 399
            +     V    + + Y++  E+  A++LF+ES  + + +W AM++GY QNG+ +EA  +
Sbjct: 229 RMPERDEVSWNTMISGYAQNGELLEAQRLFEESPVRDVFTWTAMVSGYVQNGMLDEARRV 288

Query: 400 FQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAK 459
           F  M       N V+ ++I++   Q   +   + + E +  +N  S       +I  YA+
Sbjct: 289 FDGMPEK----NSVSWNAIIAGYVQCKRMDQARELFEAMPCQNVSS----WNTMITGYAQ 340

Query: 460 CGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSV 519
            G+I +AR  FD M  +  ++W  +I+GY   G+G EAL LF EM   G R +  TF S 
Sbjct: 341 NGDIAQARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTST 400

Query: 520 LYACSHAGLVREGDEI 535
           L  C+    +  G ++
Sbjct: 401 LSTCAEIAALELGKQV 416



 Score =  113 bits (282), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 82/269 (30%), Positives = 131/269 (48%), Gaps = 28/269 (10%)

Query: 275 DLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIH 334
           D++  N  I+ +  NG+ +S+LRLF     S  R +S +   +I         +L   + 
Sbjct: 48  DIVKWNIAITNHMRNGQCDSALRLFN----SMPRRSSISWNAMISGCLSNDKFYLARQLF 103

Query: 335 SFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTE 394
                  +VS + +++       R   + AAR LFD+  E+ + SWNAM++GY QNG  +
Sbjct: 104 EKMPTRDLVSWNVMISGCV----RYRNLRAARLLFDQMPERDVVSWNAMLSGYAQNGYVK 159

Query: 395 EAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESN----IYVS 450
           EA  +F EM       N ++ + +L+A  Q G I   +        R FES     +   
Sbjct: 160 EAKEIFDEMPCK----NSISWNGMLAAYVQNGRIEDAR--------RLFESKADWELISW 207

Query: 451 TALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIR 510
             ++  Y K   +V+AR +FD M  + EV+WNTMISGY  +G  LEA +LF E   S +R
Sbjct: 208 NCMMGGYVKRNRLVDARGIFDRMPERDEVSWNTMISGYAQNGELLEAQRLFEE---SPVR 264

Query: 511 PSGVTFLSVLYACSHAGLVREGDEIFQSM 539
               T+ +++      G++ E   +F  M
Sbjct: 265 DV-FTWTAMVSGYVQNGMLDEARRVFDGM 292



 Score = 65.9 bits (159), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 52/216 (24%), Positives = 100/216 (46%), Gaps = 27/216 (12%)

Query: 324 FGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAM 383
           F  LH  +C+ S  L++   +N    T         N+ +    L   +++  +  WN  
Sbjct: 9   FRQLHSRSCLRS--LQTTTTANRKPSTR--------NQPKTTSSL---ATDADIVKWNIA 55

Query: 384 IAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNF 443
           I  + +NG  + A+ LF  M       + ++ ++++S C       L + + E + +R+ 
Sbjct: 56  ITNHMRNGQCDSALRLFNSMPRR----SSISWNAMISGCLSNDKFYLARQLFEKMPTRDL 111

Query: 444 ES-NIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFS 502
            S N+ +S  +     +  N+  AR LFD M  +  V+WN M+SGY  +G+  EA ++F 
Sbjct: 112 VSWNVMISGCV-----RYRNLRAARLLFDQMPERDVVSWNAMLSGYAQNGYVKEAKEIFD 166

Query: 503 EMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQS 538
           EM       + +++  +L A    G + +   +F+S
Sbjct: 167 EMPCK----NSISWNGMLAAYVQNGRIEDARRLFES 198


>gi|147790932|emb|CAN77232.1| hypothetical protein VITISV_001089 [Vitis vinifera]
          Length = 575

 Score =  481 bits (1237), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 245/565 (43%), Positives = 337/565 (59%), Gaps = 29/565 (5%)

Query: 248 LTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAE 307
           L  L   Y+  G ++ +  LF     P +    A+I G+   G  E +L  + Q+L    
Sbjct: 12  LDKLQRSYASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRGLHEQALNFYAQMLTQGV 71

Query: 308 RVNS---STIVGLIPVFYPFGHLH--------------LTNCIHSFCLKSGIVSNSSV-- 348
             N+   S+I+ L P+  P   LH               T  +  +     +VS   +  
Sbjct: 72  EPNAFTFSSILKLCPI-EPGKALHSQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQLFD 130

Query: 349 ---------LTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISL 399
                    LTA+ T Y++  E++AAR LFD   E+    WN MI GYTQNG+  EA+ L
Sbjct: 131 TMPEKSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVL 190

Query: 400 FQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAK 459
           F+ M  +K  PN VTV S+LSAC QLGA+  G+WVH  +++   + N++V TAL+DMY+K
Sbjct: 191 FRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSK 250

Query: 460 CGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSV 519
           CG++ +AR +FD +  K  V WN+MI GY + G   EALQLF  M   G+ P+ +TF+ +
Sbjct: 251 CGSLEDARLVFDKIDDKDVVAWNSMIVGYAMXGFSQEALQLFKSMCRMGLHPTNITFIGI 310

Query: 520 LYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEP 579
           L AC H+G V EG +IF  M  ++G +P  EHY CMV++LGRAG +E+A E +K + +EP
Sbjct: 311 LSACGHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEP 370

Query: 580 GPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQ 639
            P +WG LLGAC +H    L     E L + +  N G ++LLSNIY+A  ++   A +R 
Sbjct: 371 DPVLWGTLLGACRLHGKIALGEKIVELLVDQNLANSGTYILLSNIYAAVGNWDGVARLRT 430

Query: 640 VVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVT 699
           ++K   + K PGC+ IEV    H F +G   HP+   IY MLE++NG ++  G+  +T  
Sbjct: 431 MMKDSGVKKEPGCSSIEVNNKVHEFLAGGLNHPKRKEIYMMLEEINGWLKSHGYTPQTDI 490

Query: 700 ALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTG 759
            LHD+ E EKE  ++VHSEKLAIAFGLI T+PGT I+I+KNLRVC DCH  TK ISK+TG
Sbjct: 491 VLHDIGETEKERSLEVHSEKLAIAFGLINTQPGTTIKIVKNLRVCADCHEVTKLISKITG 550

Query: 760 RVIVVRDANRFHHFKGGVCSCGDYW 784
           R IVVRD NRFHHF  G CSCGDYW
Sbjct: 551 RKIVVRDRNRFHHFVNGSCSCGDYW 575



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 120/452 (26%), Positives = 197/452 (43%), Gaps = 75/452 (16%)

Query: 44  VTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTA 103
           + KL    +      Y+ ALF     P +F +  II G +   + + ++ FY  +     
Sbjct: 12  LDKLQRSYASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRGLHEQALNFYAQML-TQG 70

Query: 104 LTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSAR 163
           + P+ FT+S +L      C    G  LH  A+  G+ SDL+V   L+D+Y +   V SA+
Sbjct: 71  VEPNAFTFSSILK----LCPIEPGKALHSQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQ 126

Query: 164 KVFDKMPEK-------------------------------DTVLWNSMISGLMKNCCFQD 192
           ++FD MPEK                               D V WN MI G  +N    +
Sbjct: 127 QLFDTMPEKSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNE 186

Query: 193 SIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLV 252
           ++ +F  M++      +  +V +VL A  ++  L  G  +       G   +V+V T LV
Sbjct: 187 ALVLFRRMLKAKAK-PNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALV 245

Query: 253 SFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSS 312
             YSKCG +E A L+F  I   D+++ N+MI GY   G ++ +L+LF+ +        + 
Sbjct: 246 DMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMXGFSQEALQLFKSMCRMGLHPTNI 305

Query: 313 TIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDES 372
           T +G+           L+ C HS  +  G              +   N+M+      DE 
Sbjct: 306 TFIGI-----------LSACGHSGWVTEG--------------WDIFNKMK------DEY 334

Query: 373 S-EKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLG 431
             E  +  +  M+    + G  E+A  L + M    + P+PV   ++L AC   G I+LG
Sbjct: 335 GIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMN---IEPDPVLWGTLLGACRLHGKIALG 391

Query: 432 KWVHELVKSRNF-ESNIYVSTALIDMYAKCGN 462
           + + EL+  +N   S  Y+   L ++YA  GN
Sbjct: 392 EKIVELLVDQNLANSGTYI--LLSNIYAAVGN 421


>gi|449514605|ref|XP_004164425.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g49170, chloroplastic-like [Cucumis sativus]
          Length = 849

 Score =  481 bits (1237), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 277/785 (35%), Positives = 444/785 (56%), Gaps = 9/785 (1%)

Query: 7   QSRNLFLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFS 66
           Q+ +LFL      ++    T  H ++     Q D  T+  L    S       A ++F  
Sbjct: 67  QTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDSVTLNSLISLYSKCGQWEKATSIFRL 126

Query: 67  I-PKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRS 125
           +    DL  ++ ++  F+NN M   ++  +  + +N    P+ + ++    A S     S
Sbjct: 127 MGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIEN-GYYPNEYCFAAATRACSTAEFVS 185

Query: 126 IGVLLHGHAIVSGY-GSDLFVGAALVDLYFKFSW-VKSARKVFDKMPEKDTVLWNSMISG 183
           +G  + G  I +GY  SD+ VG  L+D++ K    + SA KVF+KMPE++ V W  MI+ 
Sbjct: 186 VGDSIFGFVIKTGYLQSDVCVGCGLIDMFVKGRGDLVSAFKVFEKMPERNAVTWTLMITR 245

Query: 184 LMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHD 243
           LM+     ++I +F DM+ +G    D  +++ V+ A A ++ L LG ++    ++ G   
Sbjct: 246 LMQFGYAGEAIDLFLDMIFSGYE-PDRFTLSGVISACANMELLLLGQQLHSQAIRHGLTL 304

Query: 244 HVYVLTGLVSFYSKC---GEVERAELLFRDIVRPDLISCNAMISGYTCNGK-TESSLRLF 299
              V   L++ Y+KC   G +  A  +F  I+  ++ S  AMI+GY   G   E +L LF
Sbjct: 305 DRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVFSWTAMITGYVQKGGYDEEALDLF 364

Query: 300 RQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRL 359
           R ++ +    N  T    +        L +   + +  +K G  S + V  +L ++Y+R 
Sbjct: 365 RGMILTHVIPNHFTFSSTLKACANLAALRIGEQVFTHAVKLGFSSVNCVANSLISMYARS 424

Query: 360 NEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSIL 419
             ++ ARK FD   EK+L S+N +I  Y +N  +EEA+ LF E++   +  +  T +S+L
Sbjct: 425 GRIDDARKAFDILFEKNLISYNTVIDAYAKNLNSEEALELFNEIEDQGMGASAFTFASLL 484

Query: 420 SACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEV 479
           S  A +G I  G+ +H  V     + N  V  ALI MY++CGNI  A ++F+ M  ++ +
Sbjct: 485 SGAASIGTIGKGEQIHARVIKSGLKLNQSVCNALISMYSRCGNIESAFQVFEDMEDRNVI 544

Query: 480 TWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSM 539
           +W ++I+G+  HG   +AL+LF +ML  G+RP+ VT+++VL ACSH GLV EG + F+SM
Sbjct: 545 SWTSIITGFAKHGFATQALELFHKMLEEGVRPNEVTYIAVLSACSHVGLVNEGWKHFKSM 604

Query: 540 IHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNL 599
             +HG  P  EHYAC+VDILGR+G L +A++FI  +  +    VW   LGAC +H +  L
Sbjct: 605 YTEHGVIPRMEHYACIVDILGRSGSLSEAIQFINSMPYKADALVWRTFLGACRVHGNLEL 664

Query: 600 ARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGG 659
            + A++ + E +P +   ++LLSN+Y++   + + + +R+ +K++ L K  GC+ +EV  
Sbjct: 665 GKHAAKMIIEQEPHDPAAYILLSNLYASISKWDEVSNIRKAMKEKXLIKEAGCSWVEVEN 724

Query: 660 TPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEK 719
             H F  GD  HP++  IY  L+ L+ K+++ G+       LHDVEEE+KE ++  HSEK
Sbjct: 725 KVHKFYVGDTSHPKAAEIYDELQNLSVKIKKLGYVPNLDFVLHDVEEEQKEKLLFQHSEK 784

Query: 720 LAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCS 779
           +A+AFGLI+T     IR+ KNLR+C DCH+A K+IS  TGR I+VRDANRFHH K G CS
Sbjct: 785 IAVAFGLISTSKMKPIRVFKNLRICGDCHSAIKYISMATGREIIVRDANRFHHIKDGRCS 844

Query: 780 CGDYW 784
           C +YW
Sbjct: 845 CNEYW 849



 Score =  179 bits (453), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 157/567 (27%), Positives = 262/567 (46%), Gaps = 17/567 (2%)

Query: 65  FSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDR 124
           F+ P P   L   +I+  +N  + K+ I    H+    +  PD  TYS  L         
Sbjct: 28  FTNPNP---LTGRLIQEINNGRLHKA-ISTLEHMVHQGS-HPDLQTYSLFLKKCIRTRSF 82

Query: 125 SIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKM-PEKDTVLWNSMISG 183
            IG L+H     S    D     +L+ LY K    + A  +F  M   +D + W++M+S 
Sbjct: 83  DIGTLVHEKLTQSDLQLDSVTLNSLISLYSKCGQWEKATSIFRLMGSSRDLISWSAMVSC 142

Query: 184 LMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGF-H 242
              N     ++  F DM+ N G + +    AA   A +  + + +G  I    +K G+  
Sbjct: 143 FANNNMGFRALLTFVDMIEN-GYYPNEYCFAAATRACSTAEFVSVGDSIFGFVIKTGYLQ 201

Query: 243 DHVYVLTGLVSFYSKC-GEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQ 301
             V V  GL+  + K  G++  A  +F  +   + ++   MI+     G    ++ LF  
Sbjct: 202 SDVCVGCGLIDMFVKGRGDLVSAFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLD 261

Query: 302 LLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLN- 360
           ++ S    +  T+ G+I        L L   +HS  ++ G+  +  V   L  +Y++ + 
Sbjct: 262 MIFSGYEPDRFTLSGVISACANMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSV 321

Query: 361 --EMEAARKLFDESSEKSLASWNAMIAGYTQN-GLTEEAISLFQEMQASKVAPNPVTVSS 417
              M AARK+FD+  + ++ SW AMI GY Q  G  EEA+ LF+ M  + V PN  T SS
Sbjct: 322 DGSMCAARKIFDQILDHNVFSWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSS 381

Query: 418 ILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKS 477
            L ACA L A+ +G+ V        F S   V+ +LI MYA+ G I +AR+ FD++  K+
Sbjct: 382 TLKACANLAALRIGEQVFTHAVKLGFSSVNCVANSLISMYARSGRIDDARKAFDILFEKN 441

Query: 478 EVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQ 537
            +++NT+I  Y  + +  EAL+LF+E+   G+  S  TF S+L   +  G + +G++I  
Sbjct: 442 LISYNTVIDAYAKNLNSEEALELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGEQIHA 501

Query: 538 SMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDT 597
            +I   G K        ++ +  R G +E A +  + +  +     W +++     H   
Sbjct: 502 RVIKS-GLKLNQSVCNALISMYSRCGNIESAFQVFEDME-DRNVISWTSIITGFAKHGFA 559

Query: 598 NLARVASEKLFE--LDPENVGYHVLLS 622
             A     K+ E  + P  V Y  +LS
Sbjct: 560 TQALELFHKMLEEGVRPNEVTYIAVLS 586


>gi|357450795|ref|XP_003595674.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355484722|gb|AES65925.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 975

 Score =  481 bits (1237), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 265/728 (36%), Positives = 413/728 (56%), Gaps = 5/728 (0%)

Query: 60  ARALFFSIPKPDLFLFNVIIRG-FSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAA 118
           A  +F  +P+ +L  +N ++     N    +S   F   L  +  L PD  T   V+   
Sbjct: 250 AVKVFDKMPQRNLVSWNSVMYACLENGVFEESYGLFKGLLNGDEGLMPDVATMVTVIPLC 309

Query: 119 SACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWN 178
           +   +  +G++ HG A+  G   +L V ++L+D+Y K  ++  AR +FD   EK+ + WN
Sbjct: 310 ARQGEVRLGMVFHGLALKLGLCGELKVNSSLLDMYSKCGYLCEARVLFDT-NEKNVISWN 368

Query: 179 SMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAE-VQELRLGMEIQCLGL 237
           SMI G  K+  F+ +  +   M       ++  ++  VLP   E +Q L+L  EI    L
Sbjct: 369 SMIGGYSKDRDFRGAFELLRKMQMEDKVKVNEVTLLNVLPVCEEEIQFLKLK-EIHGYAL 427

Query: 238 KLGF-HDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSL 296
           + GF      V    V+ Y+KCG +  AE +F  +    + S NA+I G+  NG    +L
Sbjct: 428 RHGFIQSDELVANAFVAGYAKCGSLHYAEGVFCGMESKMVSSWNALIGGHVQNGFPRKAL 487

Query: 297 RLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVY 356
            L+  +  S    +  TI  L+        L     IH   L++G   +  +  +L ++Y
Sbjct: 488 DLYLLMRGSGLEPDLFTIASLLSACARLKSLSCGKEIHGSMLRNGFELDEFICISLVSLY 547

Query: 357 SRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVS 416
            +  ++  A+  FD   EK+L  WN MI G++QN    +A+ +F +M +SK+ P+ +++ 
Sbjct: 548 VQCGKILLAKLFFDNMEEKNLVCWNTMINGFSQNEFPFDALDMFHQMLSSKIWPDEISII 607

Query: 417 SILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHK 476
             L AC+Q+ A+ LGK +H      +   + +V+ +LIDMYAKCG + +++ +FD +  K
Sbjct: 608 GALGACSQVSALRLGKELHCFAVKSHLTEHSFVTCSLIDMYAKCGCMEQSQNIFDRVHLK 667

Query: 477 SEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIF 536
            EVTWN +I+GYG+HGHG +A++LF  M ++G RP  VTF+++L AC+HAGLV EG E  
Sbjct: 668 GEVTWNVLITGYGIHGHGRKAIELFKSMQNAGFRPDSVTFIALLTACNHAGLVAEGLEYL 727

Query: 537 QSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKD 596
             M    G KP  EHYAC+VD+LGRAG+L +ALE +  L  +P   +W +LL +C  ++D
Sbjct: 728 GQMQSLFGIKPKLEHYACVVDMLGRAGRLNEALELVNELPDKPDSRIWSSLLSSCRNYRD 787

Query: 597 TNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIE 656
            ++    + KL EL P+    +VL+SN Y+    + +   +RQ +K+  L K  GC+ IE
Sbjct: 788 LDIGEKVANKLLELGPDKAENYVLISNFYARLGKWDEVRKMRQRMKEIGLQKDAGCSWIE 847

Query: 657 VGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVH 716
           +GG    F  GD+   QS  I     +L  K+ + G++ +T   LH++EE+EK  +++ H
Sbjct: 848 IGGKVSRFLVGDESLLQSMKIQQTWIELEKKINKIGYKPDTSCVLHELEEDEKIKILRNH 907

Query: 717 SEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGG 776
           SEKLAI+FGL+ T  GT +R+ KNLR+C+DCH A K +SK+  R I+VRD  RFHHFK G
Sbjct: 908 SEKLAISFGLLNTAKGTTLRVCKNLRICVDCHNAIKLVSKIDKREIIVRDNKRFHHFKNG 967

Query: 777 VCSCGDYW 784
            CSCGDYW
Sbjct: 968 FCSCGDYW 975



 Score =  300 bits (767), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 179/564 (31%), Positives = 303/564 (53%), Gaps = 12/564 (2%)

Query: 37  FQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYT 96
           FQND+  +T+L    S   +   +  +F +  + +LFL+N ++ G+  N + + ++  + 
Sbjct: 125 FQNDVVLITRLVTMYSICDSPYDSCLVFNASRRKNLFLWNALLSGYLRNSLFRDAVFVFV 184

Query: 97  HLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKF 156
            +   T   PDNFT   V+ A     D  +G  +HG A+ +   SD+FVG AL+ +Y KF
Sbjct: 185 EMISLTEFVPDNFTLPCVIKACVGVYDVRLGEAVHGFALKTKVLSDVFVGNALIAMYGKF 244

Query: 157 SWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVR-NGGTWLDSTSVAA 215
            +V+SA KVFDKMP+++ V WNS++   ++N  F++S  +F  ++  + G   D  ++  
Sbjct: 245 GFVESAVKVFDKMPQRNLVSWNSVMYACLENGVFEESYGLFKGLLNGDEGLMPDVATMVT 304

Query: 216 VLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPD 275
           V+P  A   E+RLGM    L LKLG    + V + L+  YSKCG +  A +LF D    +
Sbjct: 305 VIPLCARQGEVRLGMVFHGLALKLGLCGELKVNSSLLDMYSKCGYLCEARVLF-DTNEKN 363

Query: 276 LISCNAMISGYTCNGKTESSLRLFRQL-LASAERVNSSTIVGLIPVFYPFGHLHLTNCIH 334
           +IS N+MI GY+ +     +  L R++ +    +VN  T++ ++PV            IH
Sbjct: 364 VISWNSMIGGYSKDRDFRGAFELLRKMQMEDKVKVNEVTLLNVLPVCEEEIQFLKLKEIH 423

Query: 335 SFCLKSGIV-SNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLT 393
            + L+ G + S+  V  A    Y++   +  A  +F     K ++SWNA+I G+ QNG  
Sbjct: 424 GYALRHGFIQSDELVANAFVAGYAKCGSLHYAEGVFCGMESKMVSSWNALIGGHVQNGFP 483

Query: 394 EEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTAL 453
            +A+ L+  M+ S + P+  T++S+LSACA+L ++S GK +H  +    FE + ++  +L
Sbjct: 484 RKALDLYLLMRGSGLEPDLFTIASLLSACARLKSLSCGKEIHGSMLRNGFELDEFICISL 543

Query: 454 IDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSG 513
           + +Y +CG I+ A+  FD M  K+ V WNTMI+G+  +    +AL +F +ML S I P  
Sbjct: 544 VSLYVQCGKILLAKLFFDNMEEKNLVCWNTMINGFSQNEFPFDALDMFHQMLSSKIWPDE 603

Query: 514 VTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEH--YAC-MVDILGRAGQLEKALE 570
           ++ +  L ACS    +R G E+    +  H    L EH    C ++D+  + G +E++  
Sbjct: 604 ISIIGALGACSQVSALRLGKELHCFAVKSH----LTEHSFVTCSLIDMYAKCGCMEQSQN 659

Query: 571 FIKGLAVEPGPAVWGALLGACMIH 594
               + ++ G   W  L+    IH
Sbjct: 660 IFDRVHLK-GEVTWNVLITGYGIH 682



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 43/183 (23%), Positives = 90/183 (49%), Gaps = 16/183 (8%)

Query: 418 ILSACAQLGAISLGKWVHELVK-SRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHK 476
           +L  C +   I +G+ +H  +  S +F++++ + T L+ MY+ C +  ++  +F+    K
Sbjct: 99  LLQLCGEYKNIEIGRKIHNFISTSPHFQNDVVLITRLVTMYSICDSPYDSCLVFNASRRK 158

Query: 477 SEVTWNTMISGYGLHGHGLEALQLFSEMLH-SGIRPSGVTFLSVLYACSHAGLVREGDEI 535
           +   WN ++SGY  +    +A+ +F EM+  +   P   T   V+ AC     VR G+ +
Sbjct: 159 NLFLWNALLSGYLRNSLFRDAVFVFVEMISLTEFVPDNFTLPCVIKACVGVYDVRLGEAV 218

Query: 536 FQSMIHDHGF----KPLAEHYA--CMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLG 589
                  HGF    K L++ +    ++ + G+ G +E A++    +  +     W +++ 
Sbjct: 219 -------HGFALKTKVLSDVFVGNALIAMYGKFGFVESAVKVFDKMP-QRNLVSWNSVMY 270

Query: 590 ACM 592
           AC+
Sbjct: 271 ACL 273


>gi|449467092|ref|XP_004151259.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like [Cucumis sativus]
          Length = 849

 Score =  480 bits (1236), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 276/785 (35%), Positives = 444/785 (56%), Gaps = 9/785 (1%)

Query: 7   QSRNLFLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFS 66
           Q+ +LFL      ++    T  H ++     Q D  T+  L    S       A ++F  
Sbjct: 67  QTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDSVTLNSLISLYSKCGQWEKATSIFQL 126

Query: 67  I-PKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRS 125
           +    DL  ++ ++  F+NN M   ++  +  + +N    P+ + ++    A S     S
Sbjct: 127 MGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIEN-GYYPNEYCFAAATRACSTAEFVS 185

Query: 126 IGVLLHGHAIVSGY-GSDLFVGAALVDLYFKFSW-VKSARKVFDKMPEKDTVLWNSMISG 183
           +G  + G  + +GY  SD+ VG  L+D++ K    + SA KVF+KMPE++ V W  MI+ 
Sbjct: 186 VGDSIFGFVVKTGYLQSDVCVGCGLIDMFVKGRGDLVSAFKVFEKMPERNAVTWTLMITR 245

Query: 184 LMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHD 243
           LM+     ++I +F +M+ +G    D  +++ V+ A A ++ L LG ++    ++ G   
Sbjct: 246 LMQFGYAGEAIDLFLEMILSGYE-PDRFTLSGVISACANMELLLLGQQLHSQAIRHGLTL 304

Query: 244 HVYVLTGLVSFYSKC---GEVERAELLFRDIVRPDLISCNAMISGYTCNGK-TESSLRLF 299
              V   L++ Y+KC   G +  A  +F  I+  ++ S  AMI+GY   G   E +L LF
Sbjct: 305 DRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVFSWTAMITGYVQKGGYDEEALDLF 364

Query: 300 RQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRL 359
           R ++ +    N  T    +        L +   + +  +K G  S + V  +L ++Y+R 
Sbjct: 365 RGMILTHVIPNHFTFSSTLKACANLAALRIGEQVFTHAVKLGFSSVNCVANSLISMYARS 424

Query: 360 NEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSIL 419
             ++ ARK FD   EK+L S+N +I  Y +N  +EEA+ LF E++   +  +  T +S+L
Sbjct: 425 GRIDDARKAFDILFEKNLISYNTVIDAYAKNLNSEEALELFNEIEDQGMGASAFTFASLL 484

Query: 420 SACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEV 479
           S  A +G I  G+ +H  V     + N  V  ALI MY++CGNI  A ++F+ M  ++ +
Sbjct: 485 SGAASIGTIGKGEQIHARVIKSGLKLNQSVCNALISMYSRCGNIESAFQVFEDMEDRNVI 544

Query: 480 TWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSM 539
           +W ++I+G+  HG   +AL+LF +ML  G+RP+ VT+++VL ACSH GLV EG + F+SM
Sbjct: 545 SWTSIITGFAKHGFATQALELFHKMLEEGVRPNLVTYIAVLSACSHVGLVNEGWKHFKSM 604

Query: 540 IHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNL 599
             +HG  P  EHYACMVDILGR+G L +A++FI  +  +    VW   LGAC +H +  L
Sbjct: 605 YTEHGVIPRMEHYACMVDILGRSGSLSEAIQFINSMPYKADALVWRTFLGACRVHGNLEL 664

Query: 600 ARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGG 659
            + A++ + E +P +   ++LLSN+Y++   + + + +R+ +K++ L K  GC+ +EV  
Sbjct: 665 GKHAAKMIIEQEPHDPAAYILLSNLYASTSKWDEVSNIRKAMKEKNLIKEAGCSWVEVEN 724

Query: 660 TPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEK 719
             H F  GD  HP++  IY  L+ L+ K+++ G+       LHDVEEE+KE ++  HSEK
Sbjct: 725 KVHKFYVGDTSHPKAAEIYDELQNLSVKIKKLGYVPNLDFVLHDVEEEQKEKLLFQHSEK 784

Query: 720 LAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCS 779
           +A+AFGLI+T     IR+ KNLR+C DCH+A K+IS  TGR I+VRDANRFHH K G CS
Sbjct: 785 IAVAFGLISTSKMKPIRVFKNLRICGDCHSAIKYISMATGREIIVRDANRFHHIKDGRCS 844

Query: 780 CGDYW 784
           C +YW
Sbjct: 845 CNEYW 849



 Score =  179 bits (453), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 157/567 (27%), Positives = 263/567 (46%), Gaps = 17/567 (2%)

Query: 65  FSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDR 124
           F+ P P   L   +I+  +N  + K+ I    H+    +  PD  TYS  L         
Sbjct: 28  FTNPNP---LTGRLIQEINNGRLHKA-ISTLEHMVHQGS-HPDLQTYSLFLKKCIRTRSF 82

Query: 125 SIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKM-PEKDTVLWNSMISG 183
            IG L+H     S    D     +L+ LY K    + A  +F  M   +D + W++M+S 
Sbjct: 83  DIGTLVHEKLTQSDLQLDSVTLNSLISLYSKCGQWEKATSIFQLMGSSRDLISWSAMVSC 142

Query: 184 LMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGF-H 242
              N     ++  F DM+ N G + +    AA   A +  + + +G  I    +K G+  
Sbjct: 143 FANNNMGFRALLTFVDMIEN-GYYPNEYCFAAATRACSTAEFVSVGDSIFGFVVKTGYLQ 201

Query: 243 DHVYVLTGLVSFYSKC-GEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQ 301
             V V  GL+  + K  G++  A  +F  +   + ++   MI+     G    ++ LF +
Sbjct: 202 SDVCVGCGLIDMFVKGRGDLVSAFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLE 261

Query: 302 LLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLN- 360
           ++ S    +  T+ G+I        L L   +HS  ++ G+  +  V   L  +Y++ + 
Sbjct: 262 MILSGYEPDRFTLSGVISACANMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSV 321

Query: 361 --EMEAARKLFDESSEKSLASWNAMIAGYTQN-GLTEEAISLFQEMQASKVAPNPVTVSS 417
              M AARK+FD+  + ++ SW AMI GY Q  G  EEA+ LF+ M  + V PN  T SS
Sbjct: 322 DGSMCAARKIFDQILDHNVFSWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSS 381

Query: 418 ILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKS 477
            L ACA L A+ +G+ V        F S   V+ +LI MYA+ G I +AR+ FD++  K+
Sbjct: 382 TLKACANLAALRIGEQVFTHAVKLGFSSVNCVANSLISMYARSGRIDDARKAFDILFEKN 441

Query: 478 EVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQ 537
            +++NT+I  Y  + +  EAL+LF+E+   G+  S  TF S+L   +  G + +G++I  
Sbjct: 442 LISYNTVIDAYAKNLNSEEALELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGEQIHA 501

Query: 538 SMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDT 597
            +I   G K        ++ +  R G +E A +  + +  +     W +++     H   
Sbjct: 502 RVIKS-GLKLNQSVCNALISMYSRCGNIESAFQVFEDME-DRNVISWTSIITGFAKHGFA 559

Query: 598 NLARVASEKLFE--LDPENVGYHVLLS 622
             A     K+ E  + P  V Y  +LS
Sbjct: 560 TQALELFHKMLEEGVRPNLVTYIAVLS 586


>gi|449447363|ref|XP_004141438.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
            [Cucumis sativus]
          Length = 1573

 Score =  480 bits (1235), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 278/757 (36%), Positives = 423/757 (55%), Gaps = 12/757 (1%)

Query: 33   IIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSI 92
            +I G  +D+S   K   R ++ +   YA  +F      ++F +N  +  F +     ++I
Sbjct: 824  VIGGVNSDVSNNRK---RHAE-QVKAYAMKMFPFDQGSNIFAWNKKLTEFLHAGQIVAAI 879

Query: 93   -CFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVD 151
             CF T LR  + +  D+ T   +LSAA    D  +G  +H   I S +   + V  +L++
Sbjct: 880  DCFKTLLR--STIGHDSVTLVIILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMN 937

Query: 152  LYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDST 211
            +Y K   V +A K F   PE D + WN+MIS   +N    ++I  F D++R+G    D  
Sbjct: 938  MYSKAGVVYAAEKTFINSPELDLISWNTMISSYAQNNLEMEAICTFRDLLRDG-LKPDQF 996

Query: 212  SVAAVLPAVA---EVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLF 268
            ++A+VL A +   E +   LG ++    +K G  +  +V T L+  YSK G+++ AE L 
Sbjct: 997  TLASVLRACSTGDEGEYFTLGSQVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEAEFLL 1056

Query: 269  RDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLH 328
                  DL S NA++ GY  + K+  +L  F  +      ++  T+   I       +L 
Sbjct: 1057 HGKYDFDLASWNAIMFGYIKSNKSRKALEHFSLMHEMGIPIDEITLATAIKASGCLINLK 1116

Query: 329  LTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYT 388
                I ++ +K G  ++  V + +  +Y +  +M  A +LF E S     +W  MI+GY 
Sbjct: 1117 QGKQIQAYAIKLGFNNDLWVSSGVLDMYIKCGDMPNALELFGEISRPDEVAWTTMISGYI 1176

Query: 389  QNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIY 448
            +NG  + A+S++  M+ S V P+  T ++++ A + L A+  GK +H  V   ++  + +
Sbjct: 1177 ENGDEDHALSVYHLMRVSGVQPDEYTFATLIKASSCLTALEQGKQIHANVVKLDYSLDHF 1236

Query: 449  VSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSG 508
            V T+L+DMY KCG++ +A  +F  M  +  V WN M+ G   HGH  EAL LF  M  +G
Sbjct: 1237 VGTSLVDMYCKCGSVQDAYRVFRKMDVRKVVFWNAMLLGLAQHGHVDEALNLFRTMQSNG 1296

Query: 509  IRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKA 568
            I+P  VTF+ VL ACSH+GL  E  + F +M   +G  P  EHY+C+VD LGRAG++++A
Sbjct: 1297 IQPDKVTFIGVLSACSHSGLFSEAYKYFDAMFKTYGITPEIEHYSCLVDALGRAGRIQEA 1356

Query: 569  LEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAE 628
               I  +  +   +++ ALLGAC    D   A+  ++KL  LDP +   +VLLSNIY+A 
Sbjct: 1357 ENVIASMPFKASASMYRALLGACRTKGDAETAKRVADKLLALDPSDSSAYVLLSNIYAAS 1416

Query: 629  RDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKM 688
            R +      R ++K + + K PG + I+V    H+F   D+ HPQ++ IY  +E L  ++
Sbjct: 1417 RQWDDVTDARNMMKLKNVKKDPGFSWIDVKNKVHLFVVDDRSHPQASLIYEKIEDLMKRI 1476

Query: 689  REAG-FQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDC 747
            RE G +  +T   L DVEEEEKE  +  HSEKLAIAFGLI+T P   IR+IKNLRVC DC
Sbjct: 1477 REEGSYVPDTDFTLLDVEEEEKERALYYHSEKLAIAFGLISTPPSATIRVIKNLRVCGDC 1536

Query: 748  HTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
            H+A K ISK+T R IV+RDANRFHHF+ G CSCGDYW
Sbjct: 1537 HSAIKCISKLTQREIVLRDANRFHHFRNGTCSCGDYW 1573



 Score =  166 bits (419), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 155/591 (26%), Positives = 254/591 (42%), Gaps = 55/591 (9%)

Query: 27   QTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGF---- 82
            + HA+I+  G   D      L    S   + C AR +F      DL  +N I+  +    
Sbjct: 632  RAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSILAAYAQFA 691

Query: 83   -SNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGS 141
             S+ E        +  LR+    +    T + +L          +   +HG+A+  G+  
Sbjct: 692  DSSYENVLEGFRLFGLLRE-FGFSITRLTLAPLLKLCLLSGFVQVSETVHGYAVKIGFEL 750

Query: 142  DLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMV 201
            DLFV  ALV++Y K+  V  AR +FDKMPE+D VLWN M+   ++N  FQD    F    
Sbjct: 751  DLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVEN-SFQDEALRFFSAF 809

Query: 202  RNGGTWLDSTSVAAVLPAV---AEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKC 258
               G + D +++  V+  V         R   +++   +K+   D               
Sbjct: 810  HRSGFFPDFSNLHCVIGGVNSDVSNNRKRHAEQVKAYAMKMFPFDQ-------------- 855

Query: 259  GEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLI 318
                            ++ + N  ++ +   G+  +++  F+ LL S    +S T+V ++
Sbjct: 856  --------------GSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIIL 901

Query: 319  PVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLA 378
                    L L   IH+  +KS       V  +L  +YS+   + AA K F  S E  L 
Sbjct: 902  SAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLI 961

Query: 379  SWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACA---QLGAISLGKWVH 435
            SWN MI+ Y QN L  EAI  F+++    + P+  T++S+L AC+   +    +LG  VH
Sbjct: 962  SWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGEYFTLGSQVH 1021

Query: 436  ELVKSRNFESNIYVSTALIDMYAKCGNIVEAREL------FDLMSHKSEVTWNTMISGYG 489
                     ++ +VSTALID+Y+K G + EA  L      FDL S      WN ++ GY 
Sbjct: 1022 VYAIKCGIINDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLAS------WNAIMFGYI 1075

Query: 490  LHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLA 549
                  +AL+ FS M   GI    +T  + + A      +++G +I Q+     GF    
Sbjct: 1076 KSNKSRKALEHFSLMHEMGIPIDEITLATAIKASGCLINLKQGKQI-QAYAIKLGFNNDL 1134

Query: 550  EHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLA 600
               + ++D+  + G +  ALE   G    P    W  ++   + + D + A
Sbjct: 1135 WVSSGVLDMYIKCGDMPNALELF-GEISRPDEVAWTTMISGYIENGDEDHA 1184



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 130/490 (26%), Positives = 225/490 (45%), Gaps = 56/490 (11%)

Query: 117  AASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVL 176
            +A A  D  +G   H   + SG   D ++   L+ +Y K   + SAR+VFDK  ++D V 
Sbjct: 620  SAIAMADLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVT 679

Query: 177  WNSMISGLMKNCCFQDSIW--------VFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRL 228
            WNS+++   +   F DS +        +FG ++R  G  +   ++A +L        +++
Sbjct: 680  WNSILAAYAQ---FADSSYENVLEGFRLFG-LLREFGFSITRLTLAPLLKLCLLSGFVQV 735

Query: 229  GMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTC 288
               +    +K+GF   ++V   LV+ Y K G V +A LLF  +   D +  N M+  Y  
Sbjct: 736  SETVHGYAVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVE 795

Query: 289  NGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYP-FGHLHLTNCIHSFCLKSGIVSNSS 347
            N   + +LR F     S               F+P F +LH        C+  G+ S+ S
Sbjct: 796  NSFQDEALRFFSAFHRSG--------------FFPDFSNLH--------CVIGGVNSDVS 833

Query: 348  VLTALSTVYSRLNEMEA-ARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQAS 406
                 +       +++A A K+F      ++ +WN  +  +   G    AI  F+ +  S
Sbjct: 834  -----NNRKRHAEQVKAYAMKMFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRS 888

Query: 407  KVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEA 466
             +  + VT+  ILSA      + LG+ +H LV   +F   + VS +L++MY+K G +  A
Sbjct: 889  TIGHDSVTLVIILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAA 948

Query: 467  RELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHA 526
             + F        ++WNTMIS Y  +   +EA+  F ++L  G++P   T  SVL ACS  
Sbjct: 949  EKTFINSPELDLISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACS-- 1006

Query: 527  GLVREGDE----IFQSMIHDHGFK--PLAEHY--ACMVDILGRAGQLEKALEFIKGLAVE 578
                 GDE       S +H +  K   + + +    ++D+  + G++++A EF+     +
Sbjct: 1007 ----TGDEGEYFTLGSQVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEA-EFLLHGKYD 1061

Query: 579  PGPAVWGALL 588
               A W A++
Sbjct: 1062 FDLASWNAIM 1071


>gi|449486805|ref|XP_004157408.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
            protein At4g33170-like [Cucumis sativus]
          Length = 1573

 Score =  480 bits (1235), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 278/757 (36%), Positives = 423/757 (55%), Gaps = 12/757 (1%)

Query: 33   IIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSI 92
            +I G  +D+S   K   R ++ +   YA  +F      ++F +N  +  F +     ++I
Sbjct: 824  VIGGVNSDVSNNRK---RHAE-QVKAYAMKMFPFDQGSNIFAWNKKLTEFLHAGQIVAAI 879

Query: 93   -CFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVD 151
             CF T LR  + +  D+ T   +LSAA    D  +G  +H   I S +   + V  +L++
Sbjct: 880  DCFKTLLR--STIGHDSVTLVIILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMN 937

Query: 152  LYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDST 211
            +Y K   V +A K F   PE D + WN+MIS   +N    ++I  F D++R+G    D  
Sbjct: 938  MYSKAGVVYAAEKTFINSPELDLISWNTMISSYAQNNLEMEAICTFRDLLRDG-LKPDQF 996

Query: 212  SVAAVLPAVA---EVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLF 268
            ++A+VL A +   E +   LG ++    +K G  +  +V T L+  YSK G+++ AE L 
Sbjct: 997  TLASVLRACSTGDEGEYFTLGSQVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEAEFLL 1056

Query: 269  RDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLH 328
                  DL S NA++ GY  + K+  +L  F  +      ++  T+   I       +L 
Sbjct: 1057 HGKYDFDLASWNAIMFGYIKSNKSRKALEHFSLMHEMGIPIDEITLATAIKASGCLINLK 1116

Query: 329  LTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYT 388
                I ++ +K G  ++  V + +  +Y +  +M  A +LF E S     +W  MI+GY 
Sbjct: 1117 QGKQIQAYAIKLGFNNDLWVSSGVLDMYIKCGDMPNALELFGEISRPDEVAWTTMISGYI 1176

Query: 389  QNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIY 448
            +NG  + A+S++  M+ S V P+  T ++++ A + L A+  GK +H  V   ++  + +
Sbjct: 1177 ENGDEDHALSVYHLMRVSGVQPDEYTFATLIKASSCLTALEQGKQIHANVVKLDYSLDHF 1236

Query: 449  VSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSG 508
            V T+L+DMY KCG++ +A  +F  M  +  V WN M+ G   HGH  EAL LF  M  +G
Sbjct: 1237 VGTSLVDMYCKCGSVQDAYRVFRKMDVRKVVFWNAMLLGLAQHGHVDEALNLFRTMQSNG 1296

Query: 509  IRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKA 568
            I+P  VTF+ VL ACSH+GL  E  + F +M   +G  P  EHY+C+VD LGRAG++++A
Sbjct: 1297 IQPDKVTFIGVLSACSHSGLFSEAYKYFDAMFKTYGITPEIEHYSCLVDALGRAGRIQEA 1356

Query: 569  LEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAE 628
               I  +  +   +++ ALLGAC    D   A+  ++KL  LDP +   +VLLSNIY+A 
Sbjct: 1357 ENVIASMPFKASASMYRALLGACRTKGDAETAKRVADKLLALDPSDSSAYVLLSNIYAAS 1416

Query: 629  RDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKM 688
            R +      R ++K + + K PG + I+V    H+F   D+ HPQ++ IY  +E L  ++
Sbjct: 1417 RQWDDVTDARNMMKLKNVKKDPGFSWIDVKNKVHLFVVDDRSHPQASLIYEKIEDLMKRI 1476

Query: 689  REAG-FQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDC 747
            RE G +  +T   L DVEEEEKE  +  HSEKLAIAFGLI+T P   IR+IKNLRVC DC
Sbjct: 1477 REEGSYVPDTDFTLLDVEEEEKERALYYHSEKLAIAFGLISTPPSATIRVIKNLRVCGDC 1536

Query: 748  HTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
            H+A K ISK+T R IV+RDANRFHHF+ G CSCGDYW
Sbjct: 1537 HSAIKCISKLTQREIVLRDANRFHHFRNGTCSCGDYW 1573



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 155/591 (26%), Positives = 253/591 (42%), Gaps = 55/591 (9%)

Query: 27   QTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGF---- 82
            + HA+I+  G   D      L    S   + C AR +F      DL  +N I+  +    
Sbjct: 632  RAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSILAAYAQFA 691

Query: 83   -SNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGS 141
             S+ E        +  LR+    +    T + +L          +   +HG+A+  G+  
Sbjct: 692  DSSYENVLEGFRLFGLLRE-FGFSITRLTLAPLLKLCLLSGFVQVSETVHGYAVKIGFEL 750

Query: 142  DLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMV 201
            DLFV  ALV++Y K+  V  AR +FDKMPE+D VLWN M+   ++N  FQD    F    
Sbjct: 751  DLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVEN-SFQDEALRFFSAF 809

Query: 202  RNGGTWLDSTSVAAVLPAV---AEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKC 258
               G   D +++  V+  V         R   +++   +K+   D               
Sbjct: 810  HRSGFXPDFSNLHCVIGGVNSDVSNNRKRHAEQVKAYAMKMFPFDQ-------------- 855

Query: 259  GEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLI 318
                            ++ + N  ++ +   G+  +++  F+ LL S    +S T+V ++
Sbjct: 856  --------------GSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIIL 901

Query: 319  PVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLA 378
                    L L   IH+  +KS       V  +L  +YS+   + AA K F  S E  L 
Sbjct: 902  SAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLI 961

Query: 379  SWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACA---QLGAISLGKWVH 435
            SWN MI+ Y QN L  EAI  F+++    + P+  T++S+L AC+   +    +LG  VH
Sbjct: 962  SWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGEYFTLGSQVH 1021

Query: 436  ELVKSRNFESNIYVSTALIDMYAKCGNIVEAREL------FDLMSHKSEVTWNTMISGYG 489
                     ++ +VSTALID+Y+K G + EA  L      FDL S      WN ++ GY 
Sbjct: 1022 VYAIKCGIINDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLAS------WNAIMFGYI 1075

Query: 490  LHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLA 549
                  +AL+ FS M   GI    +T  + + A      +++G +I Q+     GF    
Sbjct: 1076 KSNKSRKALEHFSLMHEMGIPIDEITLATAIKASGCLINLKQGKQI-QAYAIKLGFNNDL 1134

Query: 550  EHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLA 600
               + ++D+  + G +  ALE   G    P    W  ++   + + D + A
Sbjct: 1135 WVSSGVLDMYIKCGDMPNALELF-GEISRPDEVAWTTMISGYIENGDEDHA 1184



 Score =  148 bits (374), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 130/489 (26%), Positives = 224/489 (45%), Gaps = 54/489 (11%)

Query: 117  AASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVL 176
            +A A  D  +G   H   + SG   D ++   L+ +Y K   + SAR+VFDK  ++D V 
Sbjct: 620  SAIAMADLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVT 679

Query: 177  WNSMISGLMKNCCFQDSIW--------VFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRL 228
            WNS+++   +   F DS +        +FG ++R  G  +   ++A +L        +++
Sbjct: 680  WNSILAAYAQ---FADSSYENVLEGFRLFG-LLREFGFSITRLTLAPLLKLCLLSGFVQV 735

Query: 229  GMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTC 288
               +    +K+GF   ++V   LV+ Y K G V +A LLF  +   D +  N M+  Y  
Sbjct: 736  SETVHGYAVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVE 795

Query: 289  NGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSV 348
            N   + +LR F     S          G  P    F +LH        C+  G+ S+ S 
Sbjct: 796  NSFQDEALRFFSAFHRS----------GFXP---DFSNLH--------CVIGGVNSDVS- 833

Query: 349  LTALSTVYSRLNEMEA-ARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASK 407
                +       +++A A K+F      ++ +WN  +  +   G    AI  F+ +  S 
Sbjct: 834  ----NNRKRHAEQVKAYAMKMFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRST 889

Query: 408  VAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEAR 467
            +  + VT+  ILSA      + LG+ +H LV   +F   + VS +L++MY+K G +  A 
Sbjct: 890  IGHDSVTLVIILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAE 949

Query: 468  ELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAG 527
            + F        ++WNTMIS Y  +   +EA+  F ++L  G++P   T  SVL ACS   
Sbjct: 950  KTFINSPELDLISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACS--- 1006

Query: 528  LVREGDE----IFQSMIHDHGFK--PLAEHY--ACMVDILGRAGQLEKALEFIKGLAVEP 579
                GDE       S +H +  K   + + +    ++D+  + G++++A EF+     + 
Sbjct: 1007 ---TGDEGEYFTLGSQVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEA-EFLLHGKYDF 1062

Query: 580  GPAVWGALL 588
              A W A++
Sbjct: 1063 DLASWNAIM 1071


>gi|357143522|ref|XP_003572950.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Brachypodium distachyon]
          Length = 874

 Score =  479 bits (1234), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 261/732 (35%), Positives = 420/732 (57%), Gaps = 20/732 (2%)

Query: 61  RALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASA 120
           R +F  +PK ++  +  ++ G+         +  +  +R    + P+ FT++ VLSA ++
Sbjct: 155 RVVFEGMPKRNVVTWTSLLTGYVQGRACSDVMALFFRMRAE-GVWPNPFTFTSVLSAVAS 213

Query: 121 CCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSM 180
                +G  +H  ++  G  S +FV  +L+++Y K   V+ A+ VF +M  +D V WN++
Sbjct: 214 QGAVDLGRRVHAQSVKFGCRSTVFVCNSLINMYSKCGLVEEAKAVFRQMETRDMVSWNTL 273

Query: 181 ISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLG 240
           ++GL+ N    +++ +F D  R     L  ++ + V+   A +++L L  ++    LK G
Sbjct: 274 MAGLLLNEHQLEALQLFHD-SRASMAKLSQSTYSTVIKLCANLKQLALARQLHSCVLKHG 332

Query: 241 FHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRP---DLISCNAMISGYTCNGKTESSLR 297
           FH    V+T ++  YSKCGE++ A  +F  ++ P   +++S  AMI G   N     +  
Sbjct: 333 FHSDGNVMTAIMDAYSKCGELDDAFNIF--LLMPGSQNVVSWTAMIGGCIQNADIPLAAA 390

Query: 298 LFRQLLASAERVN----SSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALS 353
           LF ++     + N    S+ +   IP+  P         IH+  +K+      SV TAL 
Sbjct: 391 LFSRMREDNVKPNEFTYSTVLTASIPILLPQ--------IHAQIIKTNYQHAPSVGTALL 442

Query: 354 TVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPV 413
             YS+L   E A  +F     K + +W+AM++ Y+Q G  + A ++F +M    + PN  
Sbjct: 443 ASYSKLGNTEEALSIFKMIDHKDVVAWSAMLSCYSQAGDCDGATNVFIKMSMQGMKPNEF 502

Query: 414 TVSSILSACAQLGA-ISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDL 472
           T+SS + ACA   A I  G+  H +     ++  I V +AL+ MYA+ G+I  AR +F+ 
Sbjct: 503 TISSAIDACASPTAGIDQGRQFHAISIKYRYQDAICVGSALVTMYARKGSIDSARIVFER 562

Query: 473 MSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREG 532
            + +  V+WN+MISGY  HG+  EAL  F +M   GI   G TFL+V+  C+HAGLV+EG
Sbjct: 563 QTDRDLVSWNSMISGYAQHGYSKEALDTFRQMETVGIEMDGATFLAVIVGCTHAGLVKEG 622

Query: 533 DEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACM 592
            + F SM+ DH   P  EHY+CMVD+  RAG+L++ +  I+G+    G  VW  LLGAC 
Sbjct: 623 QQYFDSMVMDHNISPTMEHYSCMVDLYSRAGKLDETMNLIEGMPFPAGAMVWRTLLGACR 682

Query: 593 IHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGC 652
           +HK+  L ++A++KL  L+P++   +VLLSNIY+A   + +   VR+++  +K+ K  GC
Sbjct: 683 VHKNVELGKLAAQKLLLLEPDDSATYVLLSNIYAAAGRWKERDEVRKLMDSKKVKKEAGC 742

Query: 653 TLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELM 712
           + I++    H F + D+ HP S  IYA L+ +  ++++ G+   T   LHD+ EE+KE M
Sbjct: 743 SWIQIKNKVHSFIACDKSHPLSEQIYAKLKAMTTRLKQEGYCPNTSVVLHDIAEEQKETM 802

Query: 713 MKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHH 772
           + +HSE+LA+AFGLIAT P T ++I+KNLRVC DCH   K +S +  R I++RD +RFHH
Sbjct: 803 LVMHSERLALAFGLIATPPRTPLQIVKNLRVCGDCHMVMKMVSLIEDREIIMRDCSRFHH 862

Query: 773 FKGGVCSCGDYW 784
           F  G CSCGD+W
Sbjct: 863 FNAGACSCGDFW 874



 Score =  149 bits (375), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 89/296 (30%), Positives = 151/296 (51%), Gaps = 10/296 (3%)

Query: 333 IHSFCLKSGI-VSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNG 391
           +H  C+K G   +   V TAL  +Y +   +E  R +F+   ++++ +W +++ GY Q  
Sbjct: 121 LHCLCVKCGFDRAEVGVGTALVDMYMKCGGVEDGRVVFEGMPKRNVVTWTSLLTGYVQGR 180

Query: 392 LTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVST 451
              + ++LF  M+A  V PNP T +S+LSA A  GA+ LG+ VH         S ++V  
Sbjct: 181 ACSDVMALFFRMRAEGVWPNPFTFTSVLSAVASQGAVDLGRRVHAQSVKFGCRSTVFVCN 240

Query: 452 ALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRP 511
           +LI+MY+KCG + EA+ +F  M  +  V+WNT+++G  L+ H LEALQLF +   S  + 
Sbjct: 241 SLINMYSKCGLVEEAKAVFRQMETRDMVSWNTLMAGLLLNEHQLEALQLFHDSRASMAKL 300

Query: 512 SGVTFLSVLYACSH---AGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKA 568
           S  T+ +V+  C++     L R+      S +  HGF         ++D   + G+L+ A
Sbjct: 301 SQSTYSTVIKLCANLKQLALARQ----LHSCVLKHGFHSDGNVMTAIMDAYSKCGELDDA 356

Query: 569 LEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFE--LDPENVGYHVLLS 622
                 +        W A++G C+ + D  LA     ++ E  + P    Y  +L+
Sbjct: 357 FNIFLLMPGSQNVVSWTAMIGGCIQNADIPLAAALFSRMREDNVKPNEFTYSTVLT 412



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 112/410 (27%), Positives = 192/410 (46%), Gaps = 14/410 (3%)

Query: 125 SIGVLLHGHAIVSGYGS-----DLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNS 179
           S+ VLL G    + +GS      L   A L D          AR+  D MP +D    +S
Sbjct: 6   SLPVLLRGKHAAAVFGSLKPLSALASAARLEDDCADTCNAPGARQALDGMPSRDAAAGSS 65

Query: 180 -----MISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQC 234
                ++    +     +++  F D+ R G   +   +V+ VL     + +   G ++ C
Sbjct: 66  SNPVAIVDYGRRGKGRGEALDHFVDVHRCGR--VQGAAVSRVLKVCGLIPDRVSGEQLHC 123

Query: 235 LGLKLGF-HDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTE 293
           L +K GF    V V T LV  Y KCG VE   ++F  + + ++++  ++++GY       
Sbjct: 124 LCVKCGFDRAEVGVGTALVDMYMKCGGVEDGRVVFEGMPKRNVVTWTSLLTGYVQGRACS 183

Query: 294 SSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALS 353
             + LF ++ A     N  T   ++      G + L   +H+  +K G  S   V  +L 
Sbjct: 184 DVMALFFRMRAEGVWPNPFTFTSVLSAVASQGAVDLGRRVHAQSVKFGCRSTVFVCNSLI 243

Query: 354 TVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPV 413
            +YS+   +E A+ +F +   + + SWN ++AG   N    EA+ LF + +AS    +  
Sbjct: 244 NMYSKCGLVEEAKAVFRQMETRDMVSWNTLMAGLLLNEHQLEALQLFHDSRASMAKLSQS 303

Query: 414 TVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLM 473
           T S+++  CA L  ++L + +H  V    F S+  V TA++D Y+KCG + +A  +F LM
Sbjct: 304 TYSTVIKLCANLKQLALARQLHSCVLKHGFHSDGNVMTAIMDAYSKCGELDDAFNIFLLM 363

Query: 474 -SHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYA 522
              ++ V+W  MI G   +     A  LFS M    ++P+  T+ +VL A
Sbjct: 364 PGSQNVVSWTAMIGGCIQNADIPLAAALFSRMREDNVKPNEFTYSTVLTA 413



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 115/487 (23%), Positives = 224/487 (45%), Gaps = 13/487 (2%)

Query: 12  FLSLLKGAKTQSQLT---QTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIP 68
           F S+L    +Q  +    + HAQ +  G ++ +     L +  S       A+A+F  + 
Sbjct: 204 FTSVLSAVASQGAVDLGRRVHAQSVKFGCRSTVFVCNSLINMYSKCGLVEEAKAVFRQME 263

Query: 69  KPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGV 128
             D+  +N ++ G   NE    ++  +   R + A    + TYS V+   +     ++  
Sbjct: 264 TRDMVSWNTLMAGLLLNEHQLEALQLFHDSRASMAKLSQS-TYSTVIKLCANLKQLALAR 322

Query: 129 LLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMP-EKDTVLWNSMISGLMKN 187
            LH   +  G+ SD  V  A++D Y K   +  A  +F  MP  ++ V W +MI G ++N
Sbjct: 323 QLHSCVLKHGFHSDGNVMTAIMDAYSKCGELDDAFNIFLLMPGSQNVVSWTAMIGGCIQN 382

Query: 188 CCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYV 247
                +  +F  M R      +  + + VL A   +   ++  +I    +K  +     V
Sbjct: 383 ADIPLAAALFSRM-REDNVKPNEFTYSTVLTASIPILLPQIHAQI----IKTNYQHAPSV 437

Query: 248 LTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAE 307
            T L++ YSK G  E A  +F+ I   D+++ +AM+S Y+  G  + +  +F ++     
Sbjct: 438 GTALLASYSKLGNTEEALSIFKMIDHKDVVAWSAMLSCYSQAGDCDGATNVFIKMSMQGM 497

Query: 308 RVNSSTIVGLIPV-FYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAAR 366
           + N  TI   I     P   +      H+  +K        V +AL T+Y+R   +++AR
Sbjct: 498 KPNEFTISSAIDACASPTAGIDQGRQFHAISIKYRYQDAICVGSALVTMYARKGSIDSAR 557

Query: 367 KLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLG 426
            +F+  +++ L SWN+MI+GY Q+G ++EA+  F++M+   +  +  T  +++  C   G
Sbjct: 558 IVFERQTDRDLVSWNSMISGYAQHGYSKEALDTFRQMETVGIEMDGATFLAVIVGCTHAG 617

Query: 427 AISLG-KWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKS-EVTWNTM 484
            +  G ++   +V   N    +   + ++D+Y++ G + E   L + M   +  + W T+
Sbjct: 618 LVKEGQQYFDSMVMDHNISPTMEHYSCMVDLYSRAGKLDETMNLIEGMPFPAGAMVWRTL 677

Query: 485 ISGYGLH 491
           +    +H
Sbjct: 678 LGACRVH 684



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 114/481 (23%), Positives = 210/481 (43%), Gaps = 59/481 (12%)

Query: 8   SRNLFLSLLKGAKTQSQLT---QTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALF 64
           S++ + +++K      QL    Q H+ ++ HGF +D + +T +    S       A  +F
Sbjct: 301 SQSTYSTVIKLCANLKQLALARQLHSCVLKHGFHSDGNVMTAIMDAYSKCGELDDAFNIF 360

Query: 65  FSIP-KPDLFLFNVIIRG-FSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACC 122
             +P   ++  +  +I G   N ++P ++  F + +R++  + P+ FTYS VL+A     
Sbjct: 361 LLMPGSQNVVSWTAMIGGCIQNADIPLAAALF-SRMREDN-VKPNEFTYSTVLTA----- 413

Query: 123 DRSIGVLL---HGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNS 179
             SI +LL   H   I + Y     VG AL+  Y K    + A  +F  +  KD V W++
Sbjct: 414 --SIPILLPQIHAQIIKTNYQHAPSVGTALLASYSKLGNTEEALSIFKMIDHKDVVAWSA 471

Query: 180 MISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKL 239
           M+S   +      +  VF  M   G    + T  +A+    +    +  G +   + +K 
Sbjct: 472 MLSCYSQAGDCDGATNVFIKMSMQGMKPNEFTISSAIDACASPTAGIDQGRQFHAISIKY 531

Query: 240 GFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLF 299
            + D + V + LV+ Y++ G ++ A ++F      DL+S N+MISGY  +G ++ +L  F
Sbjct: 532 RYQDAICVGSALVTMYARKGSIDSARIVFERQTDRDLVSWNSMISGYAQHGYSKEALDTF 591

Query: 300 RQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRL 359
           RQ+      ++ +T + +I             C H+  +K G     S+           
Sbjct: 592 RQMETVGIEMDGATFLAVI-----------VGCTHAGLVKEGQQYFDSM----------- 629

Query: 360 NEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTV---S 416
                   + D +   ++  ++ M+  Y++ G  +E ++L + M      P P       
Sbjct: 630 --------VMDHNISPTMEHYSCMVDLYSRAGKLDETMNLIEGM------PFPAGAMVWR 675

Query: 417 SILSACAQLGAISLGKWVHELVKSRN-FESNIYVSTALIDMYAKCGNIVEARELFDLMSH 475
           ++L AC     + LGK   + +      +S  YV   L ++YA  G   E  E+  LM  
Sbjct: 676 TLLGACRVHKNVELGKLAAQKLLLLEPDDSATYV--LLSNIYAAAGRWKERDEVRKLMDS 733

Query: 476 K 476
           K
Sbjct: 734 K 734


>gi|357440579|ref|XP_003590567.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355479615|gb|AES60818.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1212

 Score =  479 bits (1233), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 262/731 (35%), Positives = 413/731 (56%), Gaps = 12/731 (1%)

Query: 60  ARALFFS--IPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSA 117
           AR LF S  + K D   +N II           ++  +   R+   +  ++ TY+FV SA
Sbjct: 202 ARVLFDSGLMEKDDPVSWNSIISAHVGEGESLEALSLF---RRMQEVGVESNTYTFV-SA 257

Query: 118 ASACCDRS---IGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDT 174
             AC   +   IG  +H   + S + +D++V  AL+ +Y     ++ A +VF  M  KD 
Sbjct: 258 LQACEGPTFIKIGRGIHAVILKSNHFTDVYVSNALIAMYANCGQMEDAERVFKSMLFKDC 317

Query: 175 VLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQC 234
           V WN+++SG+++N  + D+I  F DM ++ G   D  SV  ++ A      L  GME+  
Sbjct: 318 VSWNTLLSGMVQNDMYSDAINHFQDM-QDSGQKPDQVSVLNMIAASGRSANLLAGMEVHA 376

Query: 235 LGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTES 294
             +K G   ++++   L+  Y KC  V+     F  +   DLIS   +I+GY  N     
Sbjct: 377 YAIKHGIDSNMHIGNSLIDMYGKCCCVKYMGSAFEYMPEKDLISWTTIIAGYAQNECHLD 436

Query: 295 SLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALST 354
           +L L R++      V+   I  ++          L   IH + LK G+ ++  +  A+  
Sbjct: 437 ALNLLRKVQLEKMDVDPMMIGSILLACSGLKSEKLIKEIHGYVLKGGL-ADILIQNAIVN 495

Query: 355 VYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVT 414
           VY  L  ++ AR +F+  + K + SW +MI     NGL  EA+ LF  +  + + P+ +T
Sbjct: 496 VYGELALVDYARHVFESINSKDIVSWTSMITCCVHNGLAIEALELFNSLIETNIEPDLIT 555

Query: 415 VSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMS 474
           + S+L A A L ++  GK +H  +  + F     ++ +L+DMYA+CG +  AR +F+ + 
Sbjct: 556 LVSVLYAAAALSSLKKGKEIHGFLIRKGFFLEGLIANSLVDMYARCGTMENARNIFNYVK 615

Query: 475 HKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDE 534
            +  + W +MI+  G+HG G +A+ LFS+M    + P  +TFL++LYACSH+GLV EG +
Sbjct: 616 QRDLILWTSMINANGMHGCGKDAIDLFSKMTDENVLPDHITFLALLYACSHSGLVVEGKQ 675

Query: 535 IFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIH 594
            F+ M +++  +P  EHYAC+VD+L R+  LE+A  F++ + +EP   VW ALLGAC IH
Sbjct: 676 HFEIMKNEYKLEPWPEHYACLVDLLARSNSLEEAYHFVRNMPIEPSAEVWCALLGACRIH 735

Query: 595 KDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTL 654
            + +L  VA++KL +L+ EN G +VL+SN ++A+  +     VR ++K  KL K PGC+ 
Sbjct: 736 SNNDLGEVAAKKLLQLNTENSGNYVLVSNTFAADGRWNDVEEVRSIMKGNKLKKKPGCSW 795

Query: 655 IEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMRE-AGFQTETVTALHDVEEEEKELMM 713
           IEV    H F + D+ HPQ   IY  L +    ++E  G++ +T    HDV EEEK  M+
Sbjct: 796 IEVENKIHTFMARDKSHPQCNNIYLKLAQFTKLLKEKGGYRAQTKLVFHDVCEEEKTQML 855

Query: 714 KVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHF 773
             HSE+LA+ +GL+ T  GT +RI KNLR+C DCH   K  S+++ R +VVRDA+RFHHF
Sbjct: 856 YGHSERLALGYGLLVTSKGTCLRITKNLRICDDCHAFFKIASEISQRTLVVRDASRFHHF 915

Query: 774 KGGVCSCGDYW 784
           + G+CSCGD+W
Sbjct: 916 ERGLCSCGDFW 926



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 135/453 (29%), Positives = 219/453 (48%), Gaps = 14/453 (3%)

Query: 80  RGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAI-VSG 138
           R  S  E  +S   F+T     T   P    YS  L   ++      G  LH H +    
Sbjct: 18  RPISLKEAFQSLTHFFTDPLPTTTRFPLQQAYSQALELCASHKALPQGQQLHAHFLKTQN 77

Query: 139 YGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFG 198
           Y   +F+    V +Y K      A KVFDKM E+    WN+MI   +    + ++I ++ 
Sbjct: 78  YLDSVFLDTKFVHMYGKCGSFYDAVKVFDKMSERTIFTWNAMIGACVSAGRYVEAIELYK 137

Query: 199 DMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKC 258
           +M R  G  LD+ +   VL A    +E RLG EI  + +K G+   V+V   L++ Y+KC
Sbjct: 138 EM-RVLGVSLDAFTFPCVLKACGAFKERRLGCEIHGVAVKCGYGGFVFVCNALIAMYAKC 196

Query: 259 GEVERAELLFRD--IVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVG 316
           G++  A +LF    + + D +S N++IS +   G++  +L LFR++       N+ T V 
Sbjct: 197 GDLGGARVLFDSGLMEKDDPVSWNSIISAHVGEGESLEALSLFRRMQEVGVESNTYTFVS 256

Query: 317 LI-----PVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDE 371
            +     P F   G       IH+  LKS   ++  V  AL  +Y+   +ME A ++F  
Sbjct: 257 ALQACEGPTFIKIGR-----GIHAVILKSNHFTDVYVSNALIAMYANCGQMEDAERVFKS 311

Query: 372 SSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLG 431
              K   SWN +++G  QN +  +AI+ FQ+MQ S   P+ V+V ++++A  +   +  G
Sbjct: 312 MLFKDCVSWNTLLSGMVQNDMYSDAINHFQDMQDSGQKPDQVSVLNMIAASGRSANLLAG 371

Query: 432 KWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLH 491
             VH        +SN+++  +LIDMY KC  +      F+ M  K  ++W T+I+GY  +
Sbjct: 372 MEVHAYAIKHGIDSNMHIGNSLIDMYGKCCCVKYMGSAFEYMPEKDLISWTTIIAGYAQN 431

Query: 492 GHGLEALQLFSEMLHSGIRPSGVTFLSVLYACS 524
              L+AL L  ++    +    +   S+L ACS
Sbjct: 432 ECHLDALNLLRKVQLEKMDVDPMMIGSILLACS 464



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 119/452 (26%), Positives = 200/452 (44%), Gaps = 19/452 (4%)

Query: 190 FQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKL-GFHDHVYVL 248
           FQ     F D +     +    + +  L   A  + L  G ++    LK   + D V++ 
Sbjct: 26  FQSLTHFFTDPLPTTTRFPLQQAYSQALELCASHKALPQGQQLHAHFLKTQNYLDSVFLD 85

Query: 249 TGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAER 308
           T  V  Y KCG    A  +F  +    + + NAMI      G+   ++ L++++      
Sbjct: 86  TKFVHMYGKCGSFYDAVKVFDKMSERTIFTWNAMIGACVSAGRYVEAIELYKEMRVLGVS 145

Query: 309 VNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKL 368
           +++ T   ++     F    L   IH   +K G      V  AL  +Y++  ++  AR L
Sbjct: 146 LDAFTFPCVLKACGAFKERRLGCEIHGVAVKCGYGGFVFVCNALIAMYAKCGDLGGARVL 205

Query: 369 FDES--SEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLG 426
           FD     +    SWN++I+ +   G + EA+SLF+ MQ   V  N  T  S L AC    
Sbjct: 206 FDSGLMEKDDPVSWNSIISAHVGEGESLEALSLFRRMQEVGVESNTYTFVSALQACEGPT 265

Query: 427 AISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMIS 486
            I +G+ +H ++   N  +++YVS ALI MYA CG + +A  +F  M  K  V+WNT++S
Sbjct: 266 FIKIGRGIHAVILKSNHFTDVYVSNALIAMYANCGQMEDAERVFKSMLFKDCVSWNTLLS 325

Query: 487 GYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGF- 545
           G   +    +A+  F +M  SG +P  V+ L+++ A   +  +  G E+    I  HG  
Sbjct: 326 GMVQNDMYSDAINHFQDMQDSGQKPDQVSVLNMIAASGRSANLLAGMEVHAYAI-KHGID 384

Query: 546 ------KPLAEHYA--CMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDT 597
                   L + Y   C V  +G A +     + I    +  G A        C +    
Sbjct: 385 SNMHIGNSLIDMYGKCCCVKYMGSAFEYMPEKDLISWTTIIAGYAQ-----NECHLDALN 439

Query: 598 NLARVASEKLFELDPENVGYHVLLSNIYSAER 629
            L +V  EK+ ++DP  +G  +L  +   +E+
Sbjct: 440 LLRKVQLEKM-DVDPMMIGSILLACSGLKSEK 470



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 102/417 (24%), Positives = 180/417 (43%), Gaps = 43/417 (10%)

Query: 27  QTHAQIIIHGFQNDLSTVTKLAHRLSDFKATC----YARALFFSIPKPDLFLFNVIIRGF 82
           + HA  I HG  +++     + + L D    C    Y  + F  +P+ DL  +  II G+
Sbjct: 373 EVHAYAIKHGIDSNM----HIGNSLIDMYGKCCCVKYMGSAFEYMPEKDLISWTTIIAGY 428

Query: 83  SNNEMPKSSICFYTHLRKNT--ALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYG 140
           + NE    ++     LRK     +  D      +L A S      +   +HG+ +  G  
Sbjct: 429 AQNECHLDALNL---LRKVQLEKMDVDPMMIGSILLACSGLKSEKLIKEIHGYVLKGGL- 484

Query: 141 SDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDM 200
           +D+ +  A+V++Y + + V  AR VF+ +  KD V W SMI+  + N    +++ +F  +
Sbjct: 485 ADILIQNAIVNVYGELALVDYARHVFESINSKDIVSWTSMITCCVHNGLAIEALELFNSL 544

Query: 201 VRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGE 260
           +       D  ++ +VL A A +  L+ G EI    ++ GF     +   LV  Y++CG 
Sbjct: 545 IET-NIEPDLITLVSVLYAAAALSSLKKGKEIHGFLIRKGFFLEGLIANSLVDMYARCGT 603

Query: 261 VERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPV 320
           +E A  +F  + + DLI   +MI+    +G  + ++ LF ++          T   ++P 
Sbjct: 604 MENARNIFNYVKQRDLILWTSMINANGMHGCGKDAIDLFSKM----------TDENVLPD 653

Query: 321 FYPFGHLHLTNCIHSFCLKSG-----IVSNSSVLTALSTVYSRLNEMEAARKLFDESS-- 373
              F  L L  C HS  +  G     I+ N   L      Y+ L ++ A     +E+   
Sbjct: 654 HITFLAL-LYACSHSGLVVEGKQHFEIMKNEYKLEPWPEHYACLVDLLARSNSLEEAYHF 712

Query: 374 ------EKSLASWNAMIAG---YTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSA 421
                 E S   W A++     ++ N L E A     ++     + N V VS+  +A
Sbjct: 713 VRNMPIEPSAEVWCALLGACRIHSNNDLGEVAAKKLLQLNTEN-SGNYVLVSNTFAA 768


>gi|224061617|ref|XP_002300569.1| predicted protein [Populus trichocarpa]
 gi|222847827|gb|EEE85374.1| predicted protein [Populus trichocarpa]
          Length = 568

 Score =  479 bits (1232), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 252/568 (44%), Positives = 344/568 (60%), Gaps = 2/568 (0%)

Query: 218 PAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLI 277
           P V    +L  G +I CL LKLGF   V+V   LV  YS+ G V  A  LF D+   D  
Sbjct: 2   PVVKACGDLLDGKKIHCLVLKLGFEWDVFVAASLVHMYSRFGLVGDARKLFDDMPARDRG 61

Query: 278 SCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFC 337
           S NAMISGY  NG    +L +  ++     ++++ T+  ++PV    G +     IH + 
Sbjct: 62  SWNAMISGYCQNGNAAEALDIADEMRLEGVKMDAITVASVLPVCAQVGDILSGKLIHLYV 121

Query: 338 LKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAI 397
           +K G+     V  AL  +Y++   +  A+K+F     K + SWN +I GY QNGL  EAI
Sbjct: 122 IKHGLEFELFVSNALINMYAKFGSLGHAQKVFGLLI-KDVVSWNTLITGYAQNGLASEAI 180

Query: 398 SLFQEMQA-SKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDM 456
            ++  M+   ++ PN  T  SIL A + +GA+  G  +H  V      S+++V T LIDM
Sbjct: 181 EVYLLMEEHEEIIPNQGTWVSILPAYSHVGALQQGMRIHGQVIKNCLYSDVFVGTCLIDM 240

Query: 457 YAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTF 516
           Y KCG + +A  LF  +  K+ V WN MIS YG+HG G +AL+LF EM    ++P  +TF
Sbjct: 241 YGKCGKLDDAISLFYQVPRKNSVPWNAMISCYGVHGDGEKALELFREMKAERVKPDHITF 300

Query: 517 LSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLA 576
           +S+L ACSH+GLV +    F  M  ++G KP  +HY CMVD+ GRAG+LE A  FIK + 
Sbjct: 301 VSLLSACSHSGLVSDAQWCFNMMEEEYGIKPSLKHYGCMVDLFGRAGELEMAFNFIKKMP 360

Query: 577 VEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAAT 636
           ++P  + WGALL AC IH +  L + ASE+LFE+D ENVGY+VLLSNIY+    +     
Sbjct: 361 IQPDASAWGALLNACRIHGNIELGKHASERLFEVDSENVGYYVLLSNIYANVGKWEGVDD 420

Query: 637 VRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTE 696
           VR + + R L K PG + I +     VF +G+Q HP+   IY  L  L  K++  G+  +
Sbjct: 421 VRSLARDRGLRKNPGWSSIILNNKVDVFYTGNQTHPKCEEIYRELRDLTSKIKTIGYVPD 480

Query: 697 TVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISK 756
               L DVEE+EKE ++  HSE+LAIA+G+I+T P T IRI KNLRVC DCHT TKFIS 
Sbjct: 481 FCFVLQDVEEDEKEHILMGHSERLAIAYGIISTSPKTPIRIFKNLRVCGDCHTVTKFISI 540

Query: 757 VTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           +T R I+VRD++RFHHFKGG CSCGDYW
Sbjct: 541 ITEREIIVRDSSRFHHFKGGTCSCGDYW 568



 Score =  182 bits (462), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 111/377 (29%), Positives = 203/377 (53%), Gaps = 5/377 (1%)

Query: 120 ACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNS 179
           AC D   G  +H   +  G+  D+FV A+LV +Y +F  V  ARK+FD MP +D   WN+
Sbjct: 6   ACGDLLDGKKIHCLVLKLGFEWDVFVAASLVHMYSRFGLVGDARKLFDDMPARDRGSWNA 65

Query: 180 MISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKL 239
           MISG  +N    +++ +  D +R  G  +D+ +VA+VLP  A+V ++  G  I    +K 
Sbjct: 66  MISGYCQNGNAAEALDI-ADEMRLEGVKMDAITVASVLPVCAQVGDILSGKLIHLYVIKH 124

Query: 240 GFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLF 299
           G    ++V   L++ Y+K G +  A+ +F  +++ D++S N +I+GY  NG    ++ ++
Sbjct: 125 GLEFELFVSNALINMYAKFGSLGHAQKVFGLLIK-DVVSWNTLITGYAQNGLASEAIEVY 183

Query: 300 RQLLASAERV-NSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSR 358
             +    E + N  T V ++P +   G L     IH   +K+ + S+  V T L  +Y +
Sbjct: 184 LLMEEHEEIIPNQGTWVSILPAYSHVGALQQGMRIHGQVIKNCLYSDVFVGTCLIDMYGK 243

Query: 359 LNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSI 418
             +++ A  LF +   K+   WNAMI+ Y  +G  E+A+ LF+EM+A +V P+ +T  S+
Sbjct: 244 CGKLDDAISLFYQVPRKNSVPWNAMISCYGVHGDGEKALELFREMKAERVKPDHITFVSL 303

Query: 419 LSACAQLGAISLGKWVHELVKSR-NFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKS 477
           LSAC+  G +S  +W   +++     + ++     ++D++ + G +  A      M  + 
Sbjct: 304 LSACSHSGLVSDAQWCFNMMEEEYGIKPSLKHYGCMVDLFGRAGELEMAFNFIKKMPIQP 363

Query: 478 EVT-WNTMISGYGLHGH 493
           + + W  +++   +HG+
Sbjct: 364 DASAWGALLNACRIHGN 380



 Score =  149 bits (376), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 128/468 (27%), Positives = 212/468 (45%), Gaps = 51/468 (10%)

Query: 27  QTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNE 86
           + H  ++  GF+ D+     L H  S F     AR LF  +P  D   +N +I G+  N 
Sbjct: 15  KIHCLVLKLGFEWDVFVAASLVHMYSRFGLVGDARKLFDDMPARDRGSWNAMISGYCQNG 74

Query: 87  MPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVG 146
               ++     +R    +  D  T + VL   +   D   G L+H + I  G   +LFV 
Sbjct: 75  NAAEALDIADEMRLE-GVKMDAITVASVLPVCAQVGDILSGKLIHLYVIKHGLEFELFVS 133

Query: 147 AALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVF------GDM 200
            AL+++Y KF  +  A+KVF  +  KD V WN++I+G  +N    ++I V+       ++
Sbjct: 134 NALINMYAKFGSLGHAQKVFGLLI-KDVVSWNTLITGYAQNGLASEAIEVYLLMEEHEEI 192

Query: 201 VRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGE 260
           + N GTW+      ++LPA + V  L+ GM I    +K   +  V+V T L+  Y KCG+
Sbjct: 193 IPNQGTWV------SILPAYSHVGALQQGMRIHGQVIKNCLYSDVFVGTCLIDMYGKCGK 246

Query: 261 VERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPV 320
           ++ A  LF  + R + +  NAMIS Y  +G  E +L LFR++ A   + +  T V L+  
Sbjct: 247 LDDAISLFYQVPRKNSVPWNAMISCYGVHGDGEKALELFREMKAERVKPDHITFVSLL-- 304

Query: 321 FYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASW 380
                         S C  SG+VS++             N ME    +     + SL  +
Sbjct: 305 --------------SACSHSGLVSDAQWC---------FNMMEEEYGI-----KPSLKHY 336

Query: 381 NAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKS 440
             M+  + + G  E A +  ++M    + P+     ++L+AC   G I LGK   E +  
Sbjct: 337 GCMVDLFGRAGELEMAFNFIKKM---PIQPDASAWGALLNACRIHGNIELGKHASERLFE 393

Query: 441 RNFESNIYVSTALIDMYAKCGN---IVEARELFDLMSHKSEVTWNTMI 485
            + E N+     L ++YA  G    + + R L      +    W+++I
Sbjct: 394 VDSE-NVGYYVLLSNIYANVGKWEGVDDVRSLARDRGLRKNPGWSSII 440


>gi|413918610|gb|AFW58542.1| hypothetical protein ZEAMMB73_242801 [Zea mays]
          Length = 941

 Score =  479 bits (1232), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 265/715 (37%), Positives = 403/715 (56%), Gaps = 5/715 (0%)

Query: 71  DLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLL 130
           D+  +N ++ G   N     ++  +  + ++     +++T   VL   +     S+G  L
Sbjct: 231 DVASWNSVVSGCVQNGRTLEALALFRGM-QSAGFPMNSYTSVAVLQVCAELGLLSLGREL 289

Query: 131 HGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCF 190
           H   +  G   ++   A LV +Y K+  V SA +VF ++ EKD + WNSM+S  ++N  +
Sbjct: 290 HAALLKCGSELNIQCNALLV-MYAKYGRVDSALRVFGQIAEKDYISWNSMLSCYVQNSFY 348

Query: 191 QDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTG 250
            ++I  FG+M+++G    D   V ++  A+  +  L  G E     +K   H  + V   
Sbjct: 349 AEAIDFFGEMLQHGFQ-PDHACVVSLSSALGHLSRLNNGREFHAYAIKQRLHTDLQVGNT 407

Query: 251 LVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVN 310
           L+  Y KCG +E +  +F  +   D IS   +++ +  + +   +L +  +L      V+
Sbjct: 408 LMDMYIKCGSIECSAKVFESMGIRDHISWTTILACFAQSSRHSEALEMILELQKEGIMVD 467

Query: 311 SSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFD 370
           S  I  ++        + L   +H + +++G++ +  +   L  +Y    E + +  LF 
Sbjct: 468 SMMIGSILETCCGLKSISLLKQVHCYAIRNGLL-DLILENRLIDIYGECGEFDHSLNLFQ 526

Query: 371 ESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISL 430
              +K + SW +MI   T NG    A+ LF EMQ + + P+ V + SIL A A L +++ 
Sbjct: 527 RVEKKDIVSWTSMINCCTNNGRLNGAVFLFTEMQKANIQPDSVALVSILVAIAGLSSLTK 586

Query: 431 GKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGL 490
           GK VH  +  RNF     V ++L+DMY+ CG++  A  +F+    K  V W  MI+  G+
Sbjct: 587 GKQVHGFLIRRNFPIEGPVVSSLVDMYSGCGSMNYAIRVFERAKCKDVVLWTAMINATGM 646

Query: 491 HGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAE 550
           HGHG +A+ LF  ML +G+ P  V+FL++LYACSH+ LV EG      M+  +  KP  E
Sbjct: 647 HGHGKQAIDLFKRMLQTGLTPDHVSFLALLYACSHSKLVEEGKHYLDIMVSKYRLKPWQE 706

Query: 551 HYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFEL 610
           HYAC+VDILGR+GQ E+A EFIK + ++P  AVW ALLGAC +H++  LA VA+ KL EL
Sbjct: 707 HYACVVDILGRSGQTEEAYEFIKTMPMDPKSAVWCALLGACRVHRNYGLAVVAANKLLEL 766

Query: 611 DPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQL 670
           +P+N G ++L+SN+++    +  A   R  + +R L K P C+ IE+G   H FTSGD  
Sbjct: 767 EPDNPGNYILVSNVFAEMGKWNNAKETRTRMAERGLRKNPACSWIEIGNNIHTFTSGDYC 826

Query: 671 HPQSTAIYAMLEKLNGKM-REAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIAT 729
           H  S AI+  L ++   + RE G+  +T   LHD  EEEK  M+  HSE++AIAFGLI+T
Sbjct: 827 HRDSEAIHLKLSEITEMLRREGGYVEDTRFVLHDTSEEEKIDMLHKHSERIAIAFGLIST 886

Query: 730 EPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
            PG  IRI KNLRVC DCH  TK +SK+  R IVVRDANRFHHF GG CSC D+W
Sbjct: 887 RPGMPIRIAKNLRVCGDCHEFTKLVSKLFERDIVVRDANRFHHFSGGSCSCEDFW 941



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 134/498 (26%), Positives = 241/498 (48%), Gaps = 13/498 (2%)

Query: 102 TALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGY---GSDLFVGAALVDLYFKFSW 158
           T   P    Y +VL   +A    + G  +H HA+ +G      D F+   LV +Y +   
Sbjct: 51  TRAPPAREHYGWVLDLVAARRAAAEGRQVHAHAVTTGSLNEDDDGFLATKLVFMYGRCGR 110

Query: 159 VKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNG--GTWLDSTSVAAV 216
           V  AR++F+ MP +    WN+++   + +    +++ V+G M  +   G+  D  ++A+V
Sbjct: 111 VDDARRLFNGMPARTVFSWNALVGAYLSSGSAGEAMRVYGAMRASAAPGSAPDGCTLASV 170

Query: 217 LPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRP-- 274
           L A     + R G E+  L +K+G      V   L+  Y+KCG ++ A  +F  + +   
Sbjct: 171 LKACGAEGDGRCGGEVHGLAVKVGLDKSTLVANALIGMYAKCGLLDSALRVFEWLQQDAR 230

Query: 275 DLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIH 334
           D+ S N+++SG   NG+T  +L LFR + ++   +NS T V ++ V    G L L   +H
Sbjct: 231 DVASWNSVVSGCVQNGRTLEALALFRGMQSAGFPMNSYTSVAVLQVCAELGLLSLGRELH 290

Query: 335 SFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTE 394
           +  LK G   N     AL  +Y++   +++A ++F + +EK   SWN+M++ Y QN    
Sbjct: 291 AALLKCGSELNIQC-NALLVMYAKYGRVDSALRVFGQIAEKDYISWNSMLSCYVQNSFYA 349

Query: 395 EAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALI 454
           EAI  F EM      P+   V S+ SA   L  ++ G+  H     +   +++ V   L+
Sbjct: 350 EAIDFFGEMLQHGFQPDHACVVSLSSALGHLSRLNNGREFHAYAIKQRLHTDLQVGNTLM 409

Query: 455 DMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGV 514
           DMY KCG+I  + ++F+ M  +  ++W T+++ +       EAL++  E+   GI    +
Sbjct: 410 DMYIKCGSIECSAKVFESMGIRDHISWTTILACFAQSSRHSEALEMILELQKEGIMVDSM 469

Query: 515 TFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKG 574
              S+L  C     +    ++    I +     + E+   ++DI G  G+ + +L   + 
Sbjct: 470 MIGSILETCCGLKSISLLKQVHCYAIRNGLLDLILENR--LIDIYGECGEFDHSLNLFQ- 526

Query: 575 LAVEPGPAV-WGALLGAC 591
             VE    V W +++  C
Sbjct: 527 -RVEKKDIVSWTSMINCC 543



 Score =  145 bits (366), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 105/378 (27%), Positives = 183/378 (48%), Gaps = 11/378 (2%)

Query: 243 DHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQL 302
           D  ++ T LV  Y +CG V+ A  LF  +    + S NA++  Y  +G    ++R++  +
Sbjct: 93  DDGFLATKLVFMYGRCGRVDDARRLFNGMPARTVFSWNALVGAYLSSGSAGEAMRVYGAM 152

Query: 303 LASAERVNSSTIVGLIPVFYPFGHLHLTNC---IHSFCLKSGIVSNSSVLTALSTVYSRL 359
            ASA   ++     L  V    G      C   +H   +K G+  ++ V  AL  +Y++ 
Sbjct: 153 RASAAPGSAPDGCTLASVLKACGAEGDGRCGGEVHGLAVKVGLDKSTLVANALIGMYAKC 212

Query: 360 NEMEAARKLFD--ESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSS 417
             +++A ++F+  +   + +ASWN++++G  QNG T EA++LF+ MQ++    N  T  +
Sbjct: 213 GLLDSALRVFEWLQQDARDVASWNSVVSGCVQNGRTLEALALFRGMQSAGFPMNSYTSVA 272

Query: 418 ILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKS 477
           +L  CA+LG +SLG+ +H  +     E NI  + AL+ MYAK G +  A  +F  ++ K 
Sbjct: 273 VLQVCAELGLLSLGRELHAALLKCGSELNIQCN-ALLVMYAKYGRVDSALRVFGQIAEKD 331

Query: 478 EVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQ 537
            ++WN+M+S Y  +    EA+  F EML  G +P     +S+  A  H   +  G E   
Sbjct: 332 YISWNSMLSCYVQNSFYAEAIDFFGEMLQHGFQPDHACVVSLSSALGHLSRLNNGREFHA 391

Query: 538 SMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDT 597
             I       L      M D+  + G +E + +  + + +    + W  +L AC      
Sbjct: 392 YAIKQRLHTDLQVGNTLM-DMYIKCGSIECSAKVFESMGIRDHIS-WTTIL-ACFAQSSR 448

Query: 598 NLARVASEKLFELDPENV 615
           +    A E + EL  E +
Sbjct: 449 H--SEALEMILELQKEGI 464



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 47/174 (27%), Positives = 81/174 (46%), Gaps = 8/174 (4%)

Query: 431 GKWVHE---LVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISG 487
           G+ VH       S N + + +++T L+ MY +CG + +AR LF+ M  ++  +WN ++  
Sbjct: 76  GRQVHAHAVTTGSLNEDDDGFLATKLVFMYGRCGRVDDARRLFNGMPARTVFSWNALVGA 135

Query: 488 YGLHGHGLEALQLFSEMLHS---GIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHG 544
           Y   G   EA++++  M  S   G  P G T  SVL AC   G  R G E+   +    G
Sbjct: 136 YLSSGSAGEAMRVYGAMRASAAPGSAPDGCTLASVLKACGAEGDGRCGGEV-HGLAVKVG 194

Query: 545 FKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGP-AVWGALLGACMIHKDT 597
                     ++ +  + G L+ AL   + L  +    A W +++  C+ +  T
Sbjct: 195 LDKSTLVANALIGMYAKCGLLDSALRVFEWLQQDARDVASWNSVVSGCVQNGRT 248


>gi|296082284|emb|CBI21289.3| unnamed protein product [Vitis vinifera]
          Length = 581

 Score =  479 bits (1232), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 240/551 (43%), Positives = 343/551 (62%), Gaps = 32/551 (5%)

Query: 266 LLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFG 325
           L  + + + ++ S N++I+    +G +  +LR F  +   + + N ST    I       
Sbjct: 31  LFNKYVDKTNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALL 90

Query: 326 HLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIA 385
            LH     H   L  G   +  V +AL  +YS+  E+  AR LFDE S +++ SW +MI 
Sbjct: 91  DLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMIT 150

Query: 386 GYTQN-------------------------------GLTEEAISLFQEM-QASKVAPNPV 413
           GY QN                               G++ E++ +F  M +  ++  N V
Sbjct: 151 GYVQNDDAHRALRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAV 210

Query: 414 TVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLM 473
           T+S++L ACA  G+  LGK +H+ V     ESN++V T++IDMY KCG +  AR+ FD M
Sbjct: 211 TLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRM 270

Query: 474 SHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGD 533
             K+  +W+ M++GYG+HGH  EAL++F EM  +G++P+ +TF+SVL ACSHAGL+ EG 
Sbjct: 271 REKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAACSHAGLLEEGW 330

Query: 534 EIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMI 593
             F++M H+   +P  EHY CMVD+LGRAG L++A + IKG+ + P   VWGALLGAC +
Sbjct: 331 HWFKAMSHEFDVEPGVEHYGCMVDLLGRAGYLKEAFDLIKGMKLRPDFVVWGALLGACRM 390

Query: 594 HKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCT 653
           HK+ +L  +++ KLFELDP+N GY+VLLSNIY+    +     +R ++K   L K PG +
Sbjct: 391 HKNVDLGEISARKLFELDPKNCGYYVLLSNIYADAGRWEDVERMRILMKNSGLVKPPGFS 450

Query: 654 LIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMM 713
           L+++ G  HVF  GD+ HPQ   IY  LEKL+ K++E G+  +  + LHDV  EEKE+++
Sbjct: 451 LVDIKGRVHVFLVGDREHPQHEKIYEYLEKLSMKLQEVGYVPDMTSVLHDVGHEEKEMVL 510

Query: 714 KVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHF 773
           +VHSEKLA+AFG++ T PGT I IIKNLRVC DCHTA KFISK+  R IVVRD+ RFHHF
Sbjct: 511 RVHSEKLAVAFGIMNTVPGTTIHIIKNLRVCGDCHTAIKFISKIVDREIVVRDSKRFHHF 570

Query: 774 KGGVCSCGDYW 784
           + G+CSCGDYW
Sbjct: 571 RDGLCSCGDYW 581



 Score =  143 bits (360), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 103/380 (27%), Positives = 178/380 (46%), Gaps = 45/380 (11%)

Query: 156 FSWVKSARK---------VFDKMPEKDTVL-WNSMISGLMKNCCFQDSIWVFGDMVRNGG 205
           FSW    R+         +F+K  +K  V  WNS+I+ L ++    +++  F  M R   
Sbjct: 13  FSWKIYRRRYSNNPNLTTLFNKYVDKTNVFSWNSVIAELARSGDSVEALRAFSSM-RKLS 71

Query: 206 TWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAE 265
              + ++    + + + + +L  G +     L  GF   ++V + LV  YSKCGE+  A 
Sbjct: 72  LKPNRSTFPCAIKSCSALLDLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDAR 131

Query: 266 LLF-----RDIV--------------------------RPDLISCNAMISGYTCNGKTES 294
            LF     R+IV                            D+IS N++I+ Y  NG +  
Sbjct: 132 TLFDEISHRNIVSWTSMITGYVQNDDAHRALRVFDGMAERDVISWNSIIAVYAQNGMSTE 191

Query: 295 SLRLFRQLLASAE-RVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALS 353
           S+ +F +++   E   N+ T+  ++      G   L  CIH   +K G+ SN  V T++ 
Sbjct: 192 SMEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSII 251

Query: 354 TVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPV 413
            +Y +  ++E ARK FD   EK++ SW+AM+AGY  +G  +EA+ +F EM  + V PN +
Sbjct: 252 DMYCKCGKVEMARKAFDRMREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYI 311

Query: 414 TVSSILSACAQLGAISLG-KWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDL 472
           T  S+L+AC+  G +  G  W   +    + E  +     ++D+  + G + EA +L   
Sbjct: 312 TFVSVLAACSHAGLLEEGWHWFKAMSHEFDVEPGVEHYGCMVDLLGRAGYLKEAFDLIKG 371

Query: 473 MSHKSE-VTWNTMISGYGLH 491
           M  + + V W  ++    +H
Sbjct: 372 MKLRPDFVVWGALLGACRMH 391



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 110/443 (24%), Positives = 194/443 (43%), Gaps = 72/443 (16%)

Query: 67  IPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSI 126
           + K ++F +N +I   + +     ++  ++ +RK  +L P+  T+   + + SA  D   
Sbjct: 36  VDKTNVFSWNSVIAELARSGDSVEALRAFSSMRK-LSLKPNRSTFPCAIKSCSALLDLHS 94

Query: 127 GVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSAR----------------------- 163
           G   H  A++ G+  DLFV +ALVD+Y K   ++ AR                       
Sbjct: 95  GRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMITGYVQ 154

Query: 164 --------KVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAA 215
                   +VFD M E+D + WNS+I+   +N    +S+ +F  MV++G    ++ +++A
Sbjct: 155 NDDAHRALRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLSA 214

Query: 216 VLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPD 275
           VL A A     RLG  I    +K+G   +V+V T ++  Y KCG+VE A   F  +   +
Sbjct: 215 VLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRMREKN 274

Query: 276 LISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHS 335
           + S +AM++GY  +G  + +L +F ++  +  + N  T V +           L  C H+
Sbjct: 275 VKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSV-----------LAACSHA 323

Query: 336 FCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEE 395
             L+ G                  +  +A    FD   E  +  +  M+    + G  +E
Sbjct: 324 GLLEEG-----------------WHWFKAMSHEFD--VEPGVEHYGCMVDLLGRAGYLKE 364

Query: 396 AISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFE---SNIYVSTA 452
           A  L + M   K+ P+ V   ++L AC     + LG    E+   + FE    N      
Sbjct: 365 AFDLIKGM---KLRPDFVVWGALLGACRMHKNVDLG----EISARKLFELDPKNCGYYVL 417

Query: 453 LIDMYAKCGNIVEARELFDLMSH 475
           L ++YA  G   +   +  LM +
Sbjct: 418 LSNIYADAGRWEDVERMRILMKN 440



 Score =  109 bits (272), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 83/306 (27%), Positives = 146/306 (47%), Gaps = 39/306 (12%)

Query: 344 SNSSVLTALSTVYSR-LNEMEAARKLFDESSEKS-LASWNAMIAGYTQNGLTEEAISLFQ 401
           S S V+T    +Y R  +       LF++  +K+ + SWN++IA   ++G + EA+  F 
Sbjct: 6   STSVVITFSWKIYRRRYSNNPNLTTLFNKYVDKTNVFSWNSVIAELARSGDSVEALRAFS 65

Query: 402 EMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCG 461
            M+   + PN  T    + +C+ L  +  G+  H+      FE +++VS+AL+DMY+KCG
Sbjct: 66  SMRKLSLKPNRSTFPCAIKSCSALLDLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCG 125

Query: 462 NIVEARELFDLMSHKSEVTWNTMISG-------------------------------YGL 490
            + +AR LFD +SH++ V+W +MI+G                               Y  
Sbjct: 126 ELRDARTLFDEISHRNIVSWTSMITGYVQNDDAHRALRVFDGMAERDVISWNSIIAVYAQ 185

Query: 491 HGHGLEALQLFSEMLHSG-IRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLA 549
           +G   E++++F  M+  G I  + VT  +VL AC+H+G  R G  I   +I   G +   
Sbjct: 186 NGMSTESMEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVI-KMGLESNV 244

Query: 550 EHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFE 609
                ++D+  + G++E A +    +  E     W A++    +H     A+ A E  +E
Sbjct: 245 FVGTSIIDMYCKCGKVEMARKAFDRMR-EKNVKSWSAMVAGYGMHGH---AKEALEVFYE 300

Query: 610 LDPENV 615
           ++   V
Sbjct: 301 MNMAGV 306



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 69/290 (23%), Positives = 123/290 (42%), Gaps = 34/290 (11%)

Query: 27  QTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSI------------------- 67
           Q H Q +I GF+ DL   + L    S       AR LF  I                   
Sbjct: 97  QAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMITGYVQND 156

Query: 68  ------------PKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVL 115
                        + D+  +N II  ++ N M   S+  +  + K+  +  +  T S VL
Sbjct: 157 DAHRALRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLSAVL 216

Query: 116 SAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTV 175
            A +    + +G  +H   I  G  S++FVG +++D+Y K   V+ ARK FD+M EK+  
Sbjct: 217 LACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRMREKNVK 276

Query: 176 LWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGME-IQC 234
            W++M++G   +   ++++ VF +M    G   +  +  +VL A +    L  G    + 
Sbjct: 277 SWSAMVAGYGMHGHAKEALEVFYEM-NMAGVKPNYITFVSVLAACSHAGLLEEGWHWFKA 335

Query: 235 LGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDI-VRPDLISCNAMI 283
           +  +      V     +V    + G ++ A  L + + +RPD +   A++
Sbjct: 336 MSHEFDVEPGVEHYGCMVDLLGRAGYLKEAFDLIKGMKLRPDFVVWGALL 385


>gi|147841045|emb|CAN68552.1| hypothetical protein VITISV_014227 [Vitis vinifera]
          Length = 1309

 Score =  479 bits (1232), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 238/545 (43%), Positives = 335/545 (61%)

Query: 240  GFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLF 299
            G   ++ V   LV FYS    ++ A  LF  +   D +S + M+ G+   G   +    F
Sbjct: 765  GMLQNLIVANKLVXFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYMNCFGTF 824

Query: 300  RQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRL 359
            R+L+    R ++ T+  +I       +L +   IH    K G+  +  V  AL  +Y + 
Sbjct: 825  RELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGKC 884

Query: 360  NEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSIL 419
             E+E AR LFD+  E+ L +W  MI GY + G   E++ LF +M+   V P+ V + +++
Sbjct: 885  REIEDARFLFDKMXERDLVTWTVMIGGYAECGNANESLVLFDKMREEGVVPDKVAMVTVV 944

Query: 420  SACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEV 479
             ACA+LGA+   + + + ++ + F+ ++ + TA+IDM+AKCG +  ARE+FD M  K+ +
Sbjct: 945  FACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKNVI 1004

Query: 480  TWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSM 539
            +W+ MI+ YG HG G +AL LF  ML SGI P+ +T +S+LYACSHAGLV EG   F  M
Sbjct: 1005 SWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAGLVEEGLRFFSXM 1064

Query: 540  IHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNL 599
              D+  +   +HY C+VD+LGRAG+L++AL+ I  +  E    +WGA LGAC  HKD  L
Sbjct: 1065 WEDYSVRXDVKHYTCVVDLLGRAGRLDEALKLIXSMTXEKDEGLWGAFLGACRTHKDVXL 1124

Query: 600  ARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGG 659
            A  A+  L EL P+N G+++LLSNIY+    +   A +R ++ +R+L K PG T IEV  
Sbjct: 1125 AEKAATSLLELQPQNPGHYILLSNIYANAGRWEDVAKIRDLMSQRRLKKIPGWTWIEVDN 1184

Query: 660  TPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEK 719
              H F+ GD  HP+S  IY ML+ L  K+   G+  +T   LHDV+EE K  ++  HSEK
Sbjct: 1185 KSHQFSVGDTTHPRSKEIYEMLKSLGNKLELVGYVPDTNFVLHDVDEELKIGILYTHSEK 1244

Query: 720  LAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCS 779
            LAIAFGLIAT   T IRIIKNLRVC DCHT  K +S +TGRVI+VRDANRFHHFK G CS
Sbjct: 1245 LAIAFGLIATPEHTPIRIIKNLRVCGDCHTFCKLVSAITGRVIIVRDANRFHHFKEGACS 1304

Query: 780  CGDYW 784
            CGDYW
Sbjct: 1305 CGDYW 1309



 Score =  406 bits (1043), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 207/503 (41%), Positives = 303/503 (60%)

Query: 240 GFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLF 299
           G  +++ V   L+ FYS    ++ A  LF  +   D +S + M+ G+   G   +    F
Sbjct: 89  GMLENIVVANKLIYFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYINCFGTF 148

Query: 300 RQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRL 359
           R+L+    R ++ T+  +I       +L +   IH    K G+  +  V  AL  +Y + 
Sbjct: 149 RELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYVKC 208

Query: 360 NEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSIL 419
            E+E AR LFD+  E+ L +W  MI GY + G   E++ LF++M+   V P+ V + +++
Sbjct: 209 REIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVV 268

Query: 420 SACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEV 479
            ACA+LGA+   + + + ++ + F+ ++ + TA+IDMYAKCG +  ARE+FD M  K+ +
Sbjct: 269 FACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVI 328

Query: 480 TWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSM 539
           +W+ MI+ YG HG G +AL LF  ML SG+ P  +T  S+LYACSHAGLV EG   F SM
Sbjct: 329 SWSAMIAAYGYHGQGRKALDLFPMMLSSGMLPDKITLASLLYACSHAGLVEEGLRFFSSM 388

Query: 540 IHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNL 599
             D+  +   +HY C+VD+LGRAG+L++AL+ IK + +E    +WGA LGAC  HKD  L
Sbjct: 389 WEDYSVRTDVKHYTCVVDLLGRAGRLDEALKLIKSMTIEKDEGLWGAFLGACRTHKDVVL 448

Query: 600 ARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGG 659
           A  A+  L EL  +N G++VLLSNIY+    +   A +R ++ +R+L K PG T IEV  
Sbjct: 449 AEKAATSLLELQSQNPGHYVLLSNIYANAGRWEDVAKIRDLMSQRRLKKTPGWTWIEVDN 508

Query: 660 TPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEK 719
             H F+ GD  HP+S  IY ML+ L+ K+   G+  +T   LHDV+EE K  ++  HSEK
Sbjct: 509 KSHQFSVGDTTHPRSKEIYEMLKSLSNKLELVGYVPDTNFVLHDVDEELKIGILYTHSEK 568

Query: 720 LAIAFGLIATEPGTEIRIIKNLR 742
           LAIAFGLIAT   T IRIIKNLR
Sbjct: 569 LAIAFGLIATPEHTPIRIIKNLR 591



 Score =  159 bits (401), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 108/414 (26%), Positives = 197/414 (47%), Gaps = 4/414 (0%)

Query: 112 SFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPE 171
            F +SA   C + +    +H  A V G   ++ V   L+  Y  +  +  A  +FD M  
Sbjct: 63  KFYISALVNCRNLTQVRQVHAQASVHGMLENIVVANKLIYFYSYYRALDDAYGLFDGMCV 122

Query: 172 KDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGME 231
           +D+V W+ M+ G  K   + +    F +++R G    D+ ++  V+ A  +++ L++G  
Sbjct: 123 RDSVSWSVMVGGFAKVGDYINCFGTFRELIRCGAR-PDNYTLPFVIRACRDLKNLQMGRL 181

Query: 232 IQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGK 291
           I  +  K G     +V   LV  Y KC E+E A  LF  +   DL++   MI GY   GK
Sbjct: 182 IHHIVYKFGLDLDHFVCAALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGK 241

Query: 292 TESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTA 351
              SL LF ++       +   +V ++      G +H    I  +  +     +  + TA
Sbjct: 242 ANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTA 301

Query: 352 LSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPN 411
           +  +Y++   +E+AR++FD   EK++ SW+AMIA Y  +G   +A+ LF  M +S + P+
Sbjct: 302 MIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLSSGMLPD 361

Query: 412 PVTVSSILSACAQLGAISLG-KWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELF 470
            +T++S+L AC+  G +  G ++   + +  +  +++   T ++D+  + G + EA +L 
Sbjct: 362 KITLASLLYACSHAGLVEEGLRFFSSMWEDYSVRTDVKHYTCVVDLLGRAGRLDEALKLI 421

Query: 471 DLMS-HKSEVTWNTMISGYGLHGHGLEALQLFSEMLH-SGIRPSGVTFLSVLYA 522
             M+  K E  W   +     H   + A +  + +L      P     LS +YA
Sbjct: 422 KSMTIEKDEGLWGAFLGACRTHKDVVLAEKAATSLLELQSQNPGHYVLLSNIYA 475



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 105/396 (26%), Positives = 185/396 (46%), Gaps = 4/396 (1%)

Query: 130  LHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCC 189
            +H  A V G   +L V   LV  Y  +  +  A  +FD M  +D+V W+ M+ G  K   
Sbjct: 757  VHXQASVHGMLQNLIVANKLVXFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVGD 816

Query: 190  FQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLT 249
            + +    F +++R G    D+ ++  V+ A  +++ L++G  I  +  K G     +V  
Sbjct: 817  YMNCFGTFRELIRCGAR-PDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCA 875

Query: 250  GLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERV 309
             LV  Y KC E+E A  LF  +   DL++   MI GY   G    SL LF ++       
Sbjct: 876  ALVDMYGKCREIEDARFLFDKMXERDLVTWTVMIGGYAECGNANESLVLFDKMREEGVVP 935

Query: 310  NSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLF 369
            +   +V ++      G +H    I  +  +     +  + TA+  ++++   +E+AR++F
Sbjct: 936  DKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIF 995

Query: 370  DESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAIS 429
            D   EK++ SW+AMIA Y  +G   +A+ LF  M  S + PN +T+ S+L AC+  G + 
Sbjct: 996  DRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAGLVE 1055

Query: 430  LG-KWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMS-HKSEVTWNTMISG 487
             G ++   + +  +   ++   T ++D+  + G + EA +L   M+  K E  W   +  
Sbjct: 1056 EGLRFFSXMWEDYSVRXDVKHYTCVVDLLGRAGRLDEALKLIXSMTXEKDEGLWGAFLGA 1115

Query: 488  YGLHGHGLEALQLFSEMLH-SGIRPSGVTFLSVLYA 522
               H     A +  + +L      P     LS +YA
Sbjct: 1116 CRTHKDVXLAEKAATSLLELQPQNPGHYILLSNIYA 1151



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 126/472 (26%), Positives = 211/472 (44%), Gaps = 46/472 (9%)

Query: 10  NLFLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPK 69
             ++S L   +  +Q+ Q HAQ  +HG   ++    KL +  S ++A   A  LF  +  
Sbjct: 63  KFYISALVNCRNLTQVRQVHAQASVHGMLENIVVANKLIYFYSYYRALDDAYGLFDGMCV 122

Query: 70  PDLFLFNVIIRGFSNNEMPKSSICFYTHLRK--NTALTPDNFTYSFVLSAASACCDRSIG 127
            D   ++V++ GF+  ++     CF T  R+       PDN+T  FV+ A     +  +G
Sbjct: 123 RDSVSWSVMVGGFA--KVGDYINCFGT-FRELIRCGARPDNYTLPFVIRACRDLKNLQMG 179

Query: 128 VLLHGHAIVSGYGSDL--FVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLM 185
            L+H   IV  +G DL  FV AALVD+Y K   ++ AR +FDKM E+D V W  MI G  
Sbjct: 180 RLIH--HIVYKFGLDLDHFVCAALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYA 237

Query: 186 KNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHV 245
           +     +S+ +F  M R  G   D  ++  V+ A A++  +     I     +  F   V
Sbjct: 238 ECGKANESLVLFEKM-REEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDV 296

Query: 246 YVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLAS 305
            + T ++  Y+KCG VE A  +F  +   ++IS +AMI+ Y  +G+   +L LF  +L+S
Sbjct: 297 ILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLSS 356

Query: 306 AERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAA 365
               +  T+  L           L  C H+  ++ G+   SS+                 
Sbjct: 357 GMLPDKITLASL-----------LYACSHAGLVEEGLRFFSSMWE--------------- 390

Query: 366 RKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQL 425
               D S    +  +  ++    + G  +EA+ L + M   K   +     + L AC   
Sbjct: 391 ----DYSVRTDVKHYTCVVDLLGRAGRLDEALKLIKSMTIEK---DEGLWGAFLGACRTH 443

Query: 426 GAISLG-KWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHK 476
             + L  K    L++ ++     YV   L ++YA  G   +  ++ DLMS +
Sbjct: 444 KDVVLAEKAATSLLELQSQNPGHYV--LLSNIYANAGRWEDVAKIRDLMSQR 493



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 82/286 (28%), Positives = 128/286 (44%), Gaps = 13/286 (4%)

Query: 317 LIPVFYPFGHLHLTNC--------IHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKL 368
           L P FY      L NC        +H+     G++ N  V   L   YS    ++ A  L
Sbjct: 60  LNPKFYISA---LVNCRNLTQVRQVHAQASVHGMLENIVVANKLIYFYSYYRALDDAYGL 116

Query: 369 FDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAI 428
           FD    +   SW+ M+ G+ + G        F+E+      P+  T+  ++ AC  L  +
Sbjct: 117 FDGMCVRDSVSWSVMVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNL 176

Query: 429 SLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGY 488
            +G+ +H +V     + + +V  AL+DMY KC  I +AR LFD M  +  VTW  MI GY
Sbjct: 177 QMGRLIHHIVYKFGLDLDHFVCAALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGY 236

Query: 489 GLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPL 548
              G   E+L LF +M   G+ P  V  ++V++AC+  G + +   I    I    F+  
Sbjct: 237 AECGKANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKA-RIIDDYIQRKKFQLD 295

Query: 549 AEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIH 594
                 M+D+  + G +E A E    +  E     W A++ A   H
Sbjct: 296 VILGTAMIDMYAKCGCVESAREIFDRME-EKNVISWSAMIAAYGYH 340



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 124/459 (27%), Positives = 204/459 (44%), Gaps = 46/459 (10%)

Query: 23   SQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGF 82
            +Q+ Q H Q  +HG   +L    KL    S ++A   A  LF  +   D   ++V++ GF
Sbjct: 752  TQVRQVHXQASVHGMLQNLIVANKLVXFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGF 811

Query: 83   SNNEMPKSSICFYTHLRK--NTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYG 140
            +  ++     CF T  R+       PDN+T  FV+ A     +  +G L+H   IV  +G
Sbjct: 812  A--KVGDYMNCFGT-FRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIH--HIVYKFG 866

Query: 141  SDL--FVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFG 198
             DL  FV AALVD+Y K   ++ AR +FDKM E+D V W  MI G  +     +S+ +F 
Sbjct: 867  LDLDHFVCAALVDMYGKCREIEDARFLFDKMXERDLVTWTVMIGGYAECGNANESLVLF- 925

Query: 199  DMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKC 258
            D +R  G   D  ++  V+ A A++  +     I     +  F   V + T ++  ++KC
Sbjct: 926  DKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKC 985

Query: 259  GEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLI 318
            G VE A  +F  +   ++IS +AMI+ Y  +G+   +L LF  +L S    N  T+V L 
Sbjct: 986  GCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSL- 1044

Query: 319  PVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLA 378
                      L  C H+  ++ G+             +S + E        D S    + 
Sbjct: 1045 ----------LYACSHAGLVEEGL-----------RFFSXMWE--------DYSVRXDVK 1075

Query: 379  SWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLG-KWVHEL 437
             +  ++    + G  +EA+ L   M   K   +     + L AC     + L  K    L
Sbjct: 1076 HYTCVVDLLGRAGRLDEALKLIXSMTXEK---DEGLWGAFLGACRTHKDVXLAEKAATSL 1132

Query: 438  VKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHK 476
            ++ +      Y+   L ++YA  G   +  ++ DLMS +
Sbjct: 1133 LELQPQNPGHYI--LLSNIYANAGRWEDVAKIRDLMSQR 1169



 Score = 60.1 bits (144), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 55/218 (25%), Positives = 89/218 (40%), Gaps = 13/218 (5%)

Query: 394 EEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTAL 453
           EE  S F  +Q      NP    S L  C  L  +   + VH          NI V+  L
Sbjct: 48  EEESSKFHFLQRL----NPKFYISALVNCRNLTQV---RQVHAQASVHGMLENIVVANKL 100

Query: 454 IDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSG 513
           I  Y+    + +A  LFD M  +  V+W+ M+ G+   G  +     F E++  G RP  
Sbjct: 101 IYFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYINCFGTFRELIRCGARPDN 160

Query: 514 VTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYAC--MVDILGRAGQLEKALEF 571
            T   V+ AC     ++ G  +   +++  G     +H+ C  +VD+  +  ++E A  F
Sbjct: 161 YTLPFVIRACRDLKNLQMG-RLIHHIVYKFGLD--LDHFVCAALVDMYVKCREIEDA-RF 216

Query: 572 IKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFE 609
           +     E     W  ++G        N + V  EK+ E
Sbjct: 217 LFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMRE 254


>gi|356570253|ref|XP_003553304.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g01510-like [Glycine max]
          Length = 815

 Score =  479 bits (1232), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 257/726 (35%), Positives = 420/726 (57%), Gaps = 3/726 (0%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           AR+LF S+ +  +  + ++I G++ +     +   +  + ++  + PD+ T + +LS  +
Sbjct: 92  ARSLFDSMVQRSVVTWTMLIGGYAQHNRFLEAFNLFADMCRH-GMVPDHITLATLLSGFT 150

Query: 120 ACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNS 179
                +    +HGH +  GY S L V  +L+D Y K   +  A  +F  M EKD V +N+
Sbjct: 151 EFESVNEVAQVHGHVVKVGYDSTLMVCNSLLDSYCKTRSLGLACHLFKHMAEKDNVTFNA 210

Query: 180 MISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKL 239
           +++G  K     D+I +F  M ++ G      + AAVL A  ++ ++  G ++    +K 
Sbjct: 211 LLTGYSKEGFNHDAINLFFKM-QDLGFRPSEFTFAAVLTAGIQMDDIEFGQQVHSFVVKC 269

Query: 240 GFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLF 299
            F  +V+V   L+ FYSK   +  A  LF ++   D IS N +I+    NG+ E SL LF
Sbjct: 270 NFVWNVFVANALLDFYSKHDRIVEARKLFYEMPEVDGISYNVLITCCAWNGRVEESLELF 329

Query: 300 RQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRL 359
           R+L  +           L+ +     +L +   IHS  + +  +S   V  +L  +Y++ 
Sbjct: 330 RELQFTRFDRRQFPFATLLSIAANSLNLEMGRQIHSQAIVTDAISEVLVGNSLVDMYAKC 389

Query: 360 NEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSIL 419
           ++   A ++F + + +S   W A+I+GY Q GL E+ + LF EM  +K+  +  T +SIL
Sbjct: 390 DKFGEANRIFADLAHQSSVPWTALISGYVQKGLHEDGLKLFVEMHRAKIGADSATYASIL 449

Query: 420 SACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEV 479
            ACA L +++LGK +H  +      SN++  +AL+DMYAKCG+I EA ++F  M  ++ V
Sbjct: 450 RACANLASLTLGKQLHSRIIRSGCLSNVFSGSALVDMYAKCGSIKEALQMFQEMPVRNSV 509

Query: 480 TWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSM 539
           +WN +IS Y  +G G  AL+ F +M+HSG++P+ V+FLS+L ACSH GLV EG + F SM
Sbjct: 510 SWNALISAYAQNGDGGHALRSFEQMIHSGLQPNSVSFLSILCACSHCGLVEEGLQYFNSM 569

Query: 540 IHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNL 599
              +  +P  EHYA MVD+L R+G+ ++A + +  +  EP   +W ++L +C IHK+  L
Sbjct: 570 TQVYKLEPRREHYASMVDMLCRSGRFDEAEKLMARMPFEPDEIMWSSILNSCRIHKNQEL 629

Query: 600 ARVASEKLFELDP-ENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVG 658
           A  A+++LF +    +   +V +SNIY+A  ++     V++ +++R + K P  + +E+ 
Sbjct: 630 AIKAADQLFNMKGLRDAAPYVSMSNIYAAAGEWDSVGKVKKALRERGIRKVPAYSWVEIK 689

Query: 659 GTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSE 718
              HVF++ D  HPQ+  I   L++L  +M E G++ ++  ALH+V+EE K   +K HSE
Sbjct: 690 QKTHVFSANDTSHPQTKEITRKLDELEKQMEEQGYKPDSTCALHNVDEEVKVESLKYHSE 749

Query: 719 KLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVC 778
           ++AIAF LI+T  G+ I ++KNLR C DCH A K ISK+  R I VRD++RFHHF  G C
Sbjct: 750 RIAIAFALISTPKGSPILVMKNLRACNDCHAAIKVISKIVNREITVRDSSRFHHFTDGSC 809

Query: 779 SCGDYW 784
           SC DYW
Sbjct: 810 SCKDYW 815



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 130/494 (26%), Positives = 228/494 (46%), Gaps = 36/494 (7%)

Query: 161 SARKVFDKMPEKDTVLWNSMISGLMK-----------NCCFQDSI--W------------ 195
           +ARK+FD+MP K+ +  N+MI G +K           +   Q S+  W            
Sbjct: 60  AARKLFDEMPHKNVISTNTMIMGYLKSGNLSTARSLFDSMVQRSVVTWTMLIGGYAQHNR 119

Query: 196 ------VFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLT 249
                 +F DM R+G    D  ++A +L    E + +    ++    +K+G+   + V  
Sbjct: 120 FLEAFNLFADMCRHGMV-PDHITLATLLSGFTEFESVNEVAQVHGHVVKVGYDSTLMVCN 178

Query: 250 GLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERV 309
            L+  Y K   +  A  LF+ +   D ++ NA+++GY+  G    ++ LF ++     R 
Sbjct: 179 SLLDSYCKTRSLGLACHLFKHMAEKDNVTFNALLTGYSKEGFNHDAINLFFKMQDLGFRP 238

Query: 310 NSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLF 369
           +  T   ++        +     +HSF +K   V N  V  AL   YS+ + +  ARKLF
Sbjct: 239 SEFTFAAVLTAGIQMDDIEFGQQVHSFVVKCNFVWNVFVANALLDFYSKHDRIVEARKLF 298

Query: 370 DESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAIS 429
            E  E    S+N +I     NG  EE++ LF+E+Q ++        +++LS  A    + 
Sbjct: 299 YEMPEVDGISYNVLITCCAWNGRVEESLELFRELQFTRFDRRQFPFATLLSIAANSLNLE 358

Query: 430 LGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYG 489
           +G+ +H      +  S + V  +L+DMYAKC    EA  +F  ++H+S V W  +ISGY 
Sbjct: 359 MGRQIHSQAIVTDAISEVLVGNSLVDMYAKCDKFGEANRIFADLAHQSSVPWTALISGYV 418

Query: 490 LHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLA 549
             G   + L+LF EM  + I     T+ S+L AC++   +  G ++   +I       + 
Sbjct: 419 QKGLHEDGLKLFVEMHRAKIGADSATYASILRACANLASLTLGKQLHSRIIRSGCLSNVF 478

Query: 550 EHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFE 609
              A +VD+  + G +++AL+  + + V      W AL+ A   + D   A  + E++  
Sbjct: 479 SGSA-LVDMYAKCGSIKEALQMFQEMPVR-NSVSWNALISAYAQNGDGGHALRSFEQMIH 536

Query: 610 --LDPENVGYHVLL 621
             L P +V +  +L
Sbjct: 537 SGLQPNSVSFLSIL 550



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 127/508 (25%), Positives = 238/508 (46%), Gaps = 10/508 (1%)

Query: 23  SQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGF 82
           +++ Q H  ++  G+ + L     L       ++   A  LF  + + D   FN ++ G+
Sbjct: 156 NEVAQVHGHVVKVGYDSTLMVCNSLLDSYCKTRSLGLACHLFKHMAEKDNVTFNALLTGY 215

Query: 83  SNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSD 142
           S       +I  +  + ++    P  FT++ VL+A     D   G  +H   +   +  +
Sbjct: 216 SKEGFNHDAINLFFKM-QDLGFRPSEFTFAAVLTAGIQMDDIEFGQQVHSFVVKCNFVWN 274

Query: 143 LFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVR 202
           +FV  AL+D Y K   +  ARK+F +MPE D + +N +I+    N   ++S+ +F ++  
Sbjct: 275 VFVANALLDFYSKHDRIVEARKLFYEMPEVDGISYNVLITCCAWNGRVEESLELFREL-- 332

Query: 203 NGGTWLDSTS--VAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGE 260
              T  D      A +L   A    L +G +I    +       V V   LV  Y+KC +
Sbjct: 333 -QFTRFDRRQFPFATLLSIAANSLNLEMGRQIHSQAIVTDAISEVLVGNSLVDMYAKCDK 391

Query: 261 VERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPV 320
              A  +F D+     +   A+ISGY   G  E  L+LF ++  +    +S+T   ++  
Sbjct: 392 FGEANRIFADLAHQSSVPWTALISGYVQKGLHEDGLKLFVEMHRAKIGADSATYASILRA 451

Query: 321 FYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASW 380
                 L L   +HS  ++SG +SN    +AL  +Y++   ++ A ++F E   ++  SW
Sbjct: 452 CANLASLTLGKQLHSRIIRSGCLSNVFSGSALVDMYAKCGSIKEALQMFQEMPVRNSVSW 511

Query: 381 NAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLG-KWVHELVK 439
           NA+I+ Y QNG    A+  F++M  S + PN V+  SIL AC+  G +  G ++ + + +
Sbjct: 512 NALISAYAQNGDGGHALRSFEQMIHSGLQPNSVSFLSILCACSHCGLVEEGLQYFNSMTQ 571

Query: 440 SRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHK-SEVTWNTMISGYGLHGHGLEAL 498
               E       +++DM  + G   EA +L   M  +  E+ W+++++   +H +   A+
Sbjct: 572 VYKLEPRREHYASMVDMLCRSGRFDEAEKLMARMPFEPDEIMWSSILNSCRIHKNQELAI 631

Query: 499 QLFSEMLH-SGIRPSG-VTFLSVLYACS 524
           +   ++ +  G+R +     +S +YA +
Sbjct: 632 KAADQLFNMKGLRDAAPYVSMSNIYAAA 659



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 59/216 (27%), Positives = 101/216 (46%), Gaps = 31/216 (14%)

Query: 338 LKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESS------------------------ 373
           +K+G   N+         + +  ++ AARKLFDE                          
Sbjct: 34  IKTGFDPNTCRFNFQVQTHLQRGDLGAARKLFDEMPHKNVISTNTMIMGYLKSGNLSTAR 93

Query: 374 -------EKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLG 426
                  ++S+ +W  +I GY Q+    EA +LF +M    + P+ +T++++LS   +  
Sbjct: 94  SLFDSMVQRSVVTWTMLIGGYAQHNRFLEAFNLFADMCRHGMVPDHITLATLLSGFTEFE 153

Query: 427 AISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMIS 486
           +++    VH  V    ++S + V  +L+D Y K  ++  A  LF  M+ K  VT+N +++
Sbjct: 154 SVNEVAQVHGHVVKVGYDSTLMVCNSLLDSYCKTRSLGLACHLFKHMAEKDNVTFNALLT 213

Query: 487 GYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYA 522
           GY   G   +A+ LF +M   G RPS  TF +VL A
Sbjct: 214 GYSKEGFNHDAINLFFKMQDLGFRPSEFTFAAVLTA 249


>gi|357167803|ref|XP_003581340.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g63370-like [Brachypodium distachyon]
          Length = 940

 Score =  479 bits (1232), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 261/715 (36%), Positives = 409/715 (57%), Gaps = 5/715 (0%)

Query: 71  DLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLL 130
           D+  +N +I G   N M   ++  +  +++   L+ +++T   VL   +     ++G  L
Sbjct: 230 DVASWNSMISGCLQNGMFLQALDLFRGMQR-AVLSMNSYTTVGVLQVCTELAQLNLGREL 288

Query: 131 HGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCF 190
           H   + SG   ++   A LV +Y K   V SA +VF ++ EKD + WNSM+S  ++N  +
Sbjct: 289 HAALLKSGSEVNIQCNALLV-MYTKCGRVDSALRVFREIDEKDYISWNSMLSCYVQNGLY 347

Query: 191 QDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTG 250
            ++I    +M+R GG   D   + ++  AV  +  L  G E+    +K        V   
Sbjct: 348 AEAIEFISEMLR-GGFQPDHACIVSLSSAVGHLGWLLNGKEVHAYAIKQRLDSDTQVGNT 406

Query: 251 LVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVN 310
           L+  Y KC  +E +  +F  +   D IS   +I+ Y  + +   +L +FR+      +V+
Sbjct: 407 LMDMYMKCRYIEYSAHVFDRMRIKDHISWTTIITCYAQSSRHIEALEIFREAQKEGIKVD 466

Query: 311 SSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFD 370
              I  ++        + L   +H + +++G++ +  V   +  +Y    E+  + K+F+
Sbjct: 467 PMMIGSILEACSGLETILLAKQLHCYAIRNGLL-DLVVKNRIIDIYGECGEVYHSLKMFE 525

Query: 371 ESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISL 430
              +K + +W +MI  Y  +GL  EA+ LF EMQ++ V P+ V + SIL A   L +++ 
Sbjct: 526 TVEQKDIVTWTSMINCYANSGLLNEALVLFAEMQSTDVQPDSVALVSILGAIGGLSSLAK 585

Query: 431 GKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGL 490
           GK VH  +  RNF     + ++L+DMY+ CG++  A ++F+ +  K  V W  MI+  G+
Sbjct: 586 GKEVHGFLIRRNFHMEEAIVSSLVDMYSGCGSLSGALKVFNAVKCKDMVLWTAMINATGM 645

Query: 491 HGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAE 550
           HGHG +A+ LF  ML +G+ P  V+FL++LYACSH+ LV EG      M+  +  +P  E
Sbjct: 646 HGHGKQAIDLFKRMLQTGVTPDHVSFLALLYACSHSKLVNEGKCYLDMMMSTYRLEPWQE 705

Query: 551 HYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFEL 610
           HYAC+VD+LGR+GQ E+A EFIK + ++P   VW +LLGAC +HK+  LA VA+ +L EL
Sbjct: 706 HYACVVDLLGRSGQTEEAYEFIKSMPLKPKSVVWCSLLGACRVHKNHELAVVAANRLLEL 765

Query: 611 DPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQL 670
           +P+N G +VL+SN+++    +  A  VR  + +R L K P C+ IE+G   H FT+ D  
Sbjct: 766 EPDNPGNYVLVSNVFAEMGKWNNAKEVRARISERGLRKDPACSWIEIGNNVHTFTTRDNS 825

Query: 671 HPQSTAIYAMLEKLNGKMR-EAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIAT 729
           H  +  I   L ++  ++R E G+  +T + LHDV EEEK  ++  HSE+LAI+FGLI T
Sbjct: 826 HRDAERINLKLAEITERLRKEGGYTEDTRSVLHDVSEEEKVDVLHRHSERLAISFGLINT 885

Query: 730 EPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
            PG  +RI KNLRVC DCH  TK +SK+  R IVVRDANRFHHF GG CSCGD+W
Sbjct: 886 RPGMPLRIAKNLRVCGDCHEFTKLVSKLFDRDIVVRDANRFHHFSGGSCSCGDFW 940



 Score =  227 bits (579), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 173/616 (28%), Positives = 292/616 (47%), Gaps = 12/616 (1%)

Query: 13  LSLLKGAKTQSQLTQTHAQIIIHGF--QNDLSTVTKLAHRLSDFKATCYARALFFSIPKP 70
           L L+   K  +Q  Q HA  +  G    +D    TKL            AR LF  +   
Sbjct: 65  LDLVAAKKAVAQGVQVHAHAVATGSLEGDDGFLATKLLFMYGKCGRVADARLLFDGMSSR 124

Query: 71  DLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTA--LTPDNFTYSFVLSAASACCDRSIGV 128
            +F +N +I  + ++     ++  Y  +R + A  + PD  T + VL A+    D   G 
Sbjct: 125 TVFSWNALIGAYLSSGSACEALGVYRAMRLSAASGVAPDGCTLASVLKASGVEGDGRCGC 184

Query: 129 LLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPE-KDTVLWNSMISGLMKN 187
            +HG A+  G     FV  AL+ +Y K   + SA +VF+ M + +D   WNSMISG ++N
Sbjct: 185 EVHGLAVKHGLDRSTFVANALIAMYAKCGILDSAMRVFELMHDGRDVASWNSMISGCLQN 244

Query: 188 CCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYV 247
             F  ++ +F  M R   + ++S +   VL    E+ +L LG E+    LK G   ++  
Sbjct: 245 GMFLQALDLFRGMQRAVLS-MNSYTTVGVLQVCTELAQLNLGRELHAALLKSGSEVNIQC 303

Query: 248 LTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAE 307
              L+  Y+KCG V+ A  +FR+I   D IS N+M+S Y  NG    ++    ++L    
Sbjct: 304 -NALLVMYTKCGRVDSALRVFREIDEKDYISWNSMLSCYVQNGLYAEAIEFISEMLRGGF 362

Query: 308 RVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARK 367
           + + + IV L       G L     +H++ +K  + S++ V   L  +Y +   +E +  
Sbjct: 363 QPDHACIVSLSSAVGHLGWLLNGKEVHAYAIKQRLDSDTQVGNTLMDMYMKCRYIEYSAH 422

Query: 368 LFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGA 427
           +FD    K   SW  +I  Y Q+    EA+ +F+E Q   +  +P+ + SIL AC+ L  
Sbjct: 423 VFDRMRIKDHISWTTIITCYAQSSRHIEALEIFREAQKEGIKVDPMMIGSILEACSGLET 482

Query: 428 ISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISG 487
           I L K +H     RN   ++ V   +ID+Y +CG +  + ++F+ +  K  VTW +MI+ 
Sbjct: 483 ILLAKQLH-CYAIRNGLLDLVVKNRIIDIYGECGEVYHSLKMFETVEQKDIVTWTSMINC 541

Query: 488 YGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKP 547
           Y   G   EAL LF+EM  + ++P  V  +S+L A      + +G E+   +I    F  
Sbjct: 542 YANSGLLNEALVLFAEMQSTDVQPDSVALVSILGAIGGLSSLAKGKEVHGFLIR-RNFHM 600

Query: 548 LAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKL 607
                + +VD+    G L  AL+    +  +    +W A++ A  +H     A    +++
Sbjct: 601 EEAIVSSLVDMYSGCGSLSGALKVFNAVKCKD-MVLWTAMINATGMHGHGKQAIDLFKRM 659

Query: 608 FE--LDPENVGYHVLL 621
            +  + P++V +  LL
Sbjct: 660 LQTGVTPDHVSFLALL 675



 Score =  205 bits (521), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 142/474 (29%), Positives = 233/474 (49%), Gaps = 8/474 (1%)

Query: 105 TPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGY--GSDLFVGAALVDLYFKFSWVKSA 162
           +P    Y +VL   +A    + GV +H HA+ +G   G D F+   L+ +Y K   V  A
Sbjct: 55  SPPQEHYGWVLDLVAAKKAVAQGVQVHAHAVATGSLEGDDGFLATKLLFMYGKCGRVADA 114

Query: 163 RKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNG--GTWLDSTSVAAVLPAV 220
           R +FD M  +    WN++I   + +    +++ V+  M  +   G   D  ++A+VL A 
Sbjct: 115 RLLFDGMSSRTVFSWNALIGAYLSSGSACEALGVYRAMRLSAASGVAPDGCTLASVLKAS 174

Query: 221 AEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVR-PDLISC 279
               + R G E+  L +K G     +V   L++ Y+KCG ++ A  +F  +    D+ S 
Sbjct: 175 GVEGDGRCGCEVHGLAVKHGLDRSTFVANALIAMYAKCGILDSAMRVFELMHDGRDVASW 234

Query: 280 NAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLK 339
           N+MISG   NG    +L LFR +  +   +NS T VG++ V      L+L   +H+  LK
Sbjct: 235 NSMISGCLQNGMFLQALDLFRGMQRAVLSMNSYTTVGVLQVCTELAQLNLGRELHAALLK 294

Query: 340 SGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISL 399
           SG   N     AL  +Y++   +++A ++F E  EK   SWN+M++ Y QNGL  EAI  
Sbjct: 295 SGSEVNIQC-NALLVMYTKCGRVDSALRVFREIDEKDYISWNSMLSCYVQNGLYAEAIEF 353

Query: 400 FQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAK 459
             EM      P+   + S+ SA   LG +  GK VH     +  +S+  V   L+DMY K
Sbjct: 354 ISEMLRGGFQPDHACIVSLSSAVGHLGWLLNGKEVHAYAIKQRLDSDTQVGNTLMDMYMK 413

Query: 460 CGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSV 519
           C  I  +  +FD M  K  ++W T+I+ Y      +EAL++F E    GI+   +   S+
Sbjct: 414 CRYIEYSAHVFDRMRIKDHISWTTIITCYAQSSRHIEALEIFREAQKEGIKVDPMMIGSI 473

Query: 520 LYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIK 573
           L ACS    +    ++    I +     + ++   ++DI G  G++  +L+  +
Sbjct: 474 LEACSGLETILLAKQLHCYAIRNGLLDLVVKNR--IIDIYGECGEVYHSLKMFE 525


>gi|296081733|emb|CBI20738.3| unnamed protein product [Vitis vinifera]
          Length = 865

 Score =  478 bits (1231), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 286/771 (37%), Positives = 430/771 (55%), Gaps = 18/771 (2%)

Query: 28  THAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGF----- 82
           THA+I++ G   D      L    S   +   AR +F + P+ DL  +N I+  +     
Sbjct: 99  THARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERDLVTWNAILGAYAASVD 158

Query: 83  SNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAA--SACCDRSIGVLLHGHAIVSGYG 140
           SN+   +  +  +  LR +   T    T + VL     S C   + GV  HG+AI  G  
Sbjct: 159 SNDGNAQEGLHLFRLLRASLGSTT-RMTLAPVLKLCLNSGCLWAAEGV--HGYAIKIGLE 215

Query: 141 SDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDM 200
            D+FV  ALV++Y K   ++ AR +FD M E+D VLWN M+ G ++    +++  +F + 
Sbjct: 216 WDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQLGLEKEAFQLFSEF 275

Query: 201 VRNGGTWLDSTSVAAVLPAV--AEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKC 258
            R+G    D  SV  +L     A   +L LG ++  + +K G    V V   LV+ YSK 
Sbjct: 276 HRSG-LRPDEFSVQLILNGCLWAGTDDLELGKQVHGIAVKSGLDSDVSVANSLVNMYSKM 334

Query: 259 GEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTI--VG 316
           G    A  +F D+   DLIS N+MIS    +   E S+ LF  LL    + +  T+  + 
Sbjct: 335 GCAYFAREVFNDMKHLDLISWNSMISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLASIT 394

Query: 317 LIPVFYPFGHLHLTNC---IHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESS 373
           L       G L L +    IH+  +K+G  S+  V + +  +Y +  +M  A  +F+  S
Sbjct: 395 LATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGILDMYIKCGDMVNAGIVFNYIS 454

Query: 374 EKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKW 433
                +W +MI+G   NG  ++A+ ++  M+ S+V P+  T ++++ A + + A+  G+ 
Sbjct: 455 APDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKASSCVTALEQGRQ 514

Query: 434 VHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGH 493
           +H  V   +  S+ +V T+L+DMYAKCGNI +A  LF  M+ ++   WN M+ G   HG+
Sbjct: 515 LHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMNVRNIALWNAMLVGLAQHGN 574

Query: 494 GLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYA 553
             EA+ LF  M   GI P  V+F+ +L ACSHAGL  E  E   SM +D+G +P  EHY+
Sbjct: 575 AEEAVNLFKSMKSHGIEPDRVSFIGILSACSHAGLTSEAYEYLHSMPNDYGIEPEIEHYS 634

Query: 554 CMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPE 613
           C+VD LGRAG +++A + I+ +  +   ++  ALLGAC I  D    +  + +LF L+P 
Sbjct: 635 CLVDALGRAGLVQEADKVIETMPFKASASINRALLGACRIQGDVETGKRVAARLFALEPF 694

Query: 614 NVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQ 673
           +   +VLLSNIY+A   +      R+++K++ + K PG + I+V    H+F   D+ HPQ
Sbjct: 695 DSAAYVLLSNIYAAANRWDDVTDARKMMKRKNVKKDPGFSWIDVKNMLHLFVVDDRSHPQ 754

Query: 674 STAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGT 733
           +  IY  +E++   +RE G+  +T   L DVE+EEKE  +  HSEKLAIA+GLI+T   T
Sbjct: 755 ADIIYDKVEEMMKTIREDGYVPDTEFVLLDVEDEEKERSLYYHSEKLAIAYGLISTPAST 814

Query: 734 EIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
            IR+IKNLRVC DCH A K+ISKV  R IV+RDANRFHHF+ GVCSCGDYW
Sbjct: 815 TIRVIKNLRVCGDCHNAIKYISKVFEREIVLRDANRFHHFRDGVCSCGDYW 865



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 69/207 (33%), Positives = 113/207 (54%), Gaps = 5/207 (2%)

Query: 326 HLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIA 385
           +L L  C H+  + SG   +  +   L T+YS+   + +AR++FD + E+ L +WNA++ 
Sbjct: 92  NLLLGKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERDLVTWNAILG 151

Query: 386 GY-----TQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKS 440
            Y     + +G  +E + LF+ ++AS  +   +T++ +L  C   G +   + VH     
Sbjct: 152 AYAASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAAEGVHGYAIK 211

Query: 441 RNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQL 500
              E +++VS AL+++Y+KCG + +AR LFD M  +  V WN M+ GY   G   EA QL
Sbjct: 212 IGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQLGLEKEAFQL 271

Query: 501 FSEMLHSGIRPSGVTFLSVLYACSHAG 527
           FSE   SG+RP   +   +L  C  AG
Sbjct: 272 FSEFHRSGLRPDEFSVQLILNGCLWAG 298


>gi|357167019|ref|XP_003580964.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Brachypodium distachyon]
          Length = 861

 Score =  478 bits (1231), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 276/715 (38%), Positives = 406/715 (56%), Gaps = 43/715 (6%)

Query: 108 NFTYSFVLSAASACCDRS--IGVLLHGHAIVSGY---GSDLFVGAALVDLYFKFSWVKSA 162
           +FT   VL A S   D+   +G   H  A+  G+   G + F   AL+ +Y +   V  A
Sbjct: 152 SFTLVSVLLACSHLADQGHRLGREAHAFALKHGFLDKGRERFPFNALLSMYARLGLVDDA 211

Query: 163 RKVF--DKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAV 220
           +++F        D V WN+MIS L++    ++++ V  DMV  G    D  + A+ LPA 
Sbjct: 212 QRLFFSSGAGVGDLVTWNTMISLLVQGGRCEEAVQVLYDMVALG-VRPDGVTFASALPAC 270

Query: 221 AEVQELRLGMEIQCLGLKLG-FHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPD---- 275
           + ++ L +G E+    LK      + +V + LV  Y+   +V  A  +F D+V P+    
Sbjct: 271 SRLELLGVGREVHAFVLKDDDLAANSFVASALVDMYASNEQVSHARRVF-DMV-PEHGRQ 328

Query: 276 LISCNAMISGYTCNGK-TESSLRLFRQLLASAERVNS-STIVGLIPVFYPFGHLHLTNCI 333
           L   NAMI GY  +G   E ++ LF ++ A A    S +T+ G++P             +
Sbjct: 329 LGMWNAMICGYAQHGGMDEEAIELFSRMEAEAGCAPSETTMAGVLPACARSEVFTGKEAV 388

Query: 334 HSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLT 393
           H + +K  + SN  V  AL  +Y+RL  M+ A  +F     + + SWN +I G    GL 
Sbjct: 389 HGYVVKRDMASNRFVQNALMDMYARLGRMDEAHTIFAMIDLRDIVSWNTLITGCIVQGLI 448

Query: 394 EEAISLFQEMQ--------------------ASKVAPNPVTVSSILSACAQLGAISLGKW 433
            EA  L +EMQ                      +  PN +T+ ++L  CA L A + GK 
Sbjct: 449 SEAFQLVREMQLPSSAASGETMLEGDDTSVDGQRCMPNNITLMTLLPGCAVLAAPARGKE 508

Query: 434 VHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGH 493
           +H        ES++ V +AL+DMYAKCG +  AR +FD +  ++ +TWN +I  YG+HG 
Sbjct: 509 IHGYAVRHALESDLAVGSALVDMYAKCGCLALARAVFDRLPRRNVITWNVLIMAYGMHGL 568

Query: 494 GLEALQLFSEMLHSG-IRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHY 552
           G EAL LF  M+ +G   P+ VTF++ L ACSH+GLV  G E+FQ M  D+GF+P    +
Sbjct: 569 GDEALALFDRMVANGEATPNEVTFIAALAACSHSGLVDRGLELFQGMKRDYGFEPTPYLH 628

Query: 553 ACMVDILGRAGQLEKALEFIKGLAVEPGP---AVWGALLGACMIHKDTNLARVASEKLFE 609
           AC+VD+LGRAG+L++A   I  +A  PG    + W  +LGAC +H++  L R+A+E+LFE
Sbjct: 629 ACVVDVLGRAGRLDEAYGIISSMA--PGEHQVSAWSTMLGACRLHRNVKLGRIAAERLFE 686

Query: 610 LDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQ 669
           L+P+   ++VLL NIYSA   +  +  VR ++++R +AK PGC+ IE+ G  H F +G+ 
Sbjct: 687 LEPDEASHYVLLCNIYSAAGLWENSTEVRGMMRQRGVAKEPGCSWIELDGAIHRFMAGES 746

Query: 670 LHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIAT 729
            HP+S  ++A ++ L  +MR  G+  +T   LHDV+E EK  M++ HSEKLAIAFGL+  
Sbjct: 747 AHPESAQVHAHMDALWERMRREGYVPDTSCVLHDVDEAEKAAMLRYHSEKLAIAFGLLRA 806

Query: 730 EPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
            PG  IR+ KNLRVC DCH A KFIS++ GR IV+RD  RFHHF+ G CSCGDYW
Sbjct: 807 PPGATIRVAKNLRVCNDCHEAAKFISRMVGREIVLRDVRRFHHFRDGTCSCGDYW 861


>gi|15235498|ref|NP_192184.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75213324|sp|Q9SY02.1|PP301_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g02750
 gi|4263522|gb|AAD15348.1| hypothetical protein [Arabidopsis thaliana]
 gi|7269760|emb|CAB77760.1| hypothetical protein [Arabidopsis thaliana]
 gi|332656824|gb|AEE82224.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 781

 Score =  478 bits (1230), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 260/726 (35%), Positives = 408/726 (56%), Gaps = 59/726 (8%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGF-SNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAA 118
           AR LF  +P+ DL  +NV+I+G+  N  + K+   F         + P+    S+     
Sbjct: 114 ARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELF--------EIMPERDVCSW----- 160

Query: 119 SACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWN 178
                         + ++SGY  +                V  AR VFD+MPEK+ V WN
Sbjct: 161 --------------NTMLSGYAQN--------------GCVDDARSVFDRMPEKNDVSWN 192

Query: 179 SMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLK 238
           +++S  ++N   +++  +F    ++   W    S   +L    + +++   +E +     
Sbjct: 193 ALLSAYVQNSKMEEACMLF----KSRENWA-LVSWNCLLGGFVKKKKI---VEARQFFDS 244

Query: 239 LGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRL 298
           +   D V     +++ Y++ G+++ A  LF +    D+ +  AM+SGY  N   E +  L
Sbjct: 245 MNVRD-VVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEAREL 303

Query: 299 FRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSR 358
           F ++    E   ++ + G +          L + +           N S    + T Y++
Sbjct: 304 FDKMPERNEVSWNAMLAGYVQGERMEMAKELFDVMP--------CRNVSTWNTMITGYAQ 355

Query: 359 LNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSI 418
             ++  A+ LFD+  ++   SW AMIAGY+Q+G + EA+ LF +M+      N  + SS 
Sbjct: 356 CGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSA 415

Query: 419 LSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSE 478
           LS CA + A+ LGK +H  +    +E+  +V  AL+ MY KCG+I EA +LF  M+ K  
Sbjct: 416 LSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDI 475

Query: 479 VTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQS 538
           V+WNTMI+GY  HG G  AL+ F  M   G++P   T ++VL ACSH GLV +G + F +
Sbjct: 476 VSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYT 535

Query: 539 MIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTN 598
           M  D+G  P ++HYACMVD+LGRAG LE A   +K +  EP  A+WG LLGA  +H +T 
Sbjct: 536 MTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTE 595

Query: 599 LARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVG 658
           LA  A++K+F ++PEN G +VLLSN+Y++   +     +R  ++ + + K PG + IE+ 
Sbjct: 596 LAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQ 655

Query: 659 GTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSE 718
              H F+ GD+ HP+   I+A LE+L+ +M++AG+ ++T   LHDVEEEEKE M++ HSE
Sbjct: 656 NKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAGYVSKTSVVLHDVEEEEKERMVRYHSE 715

Query: 719 KLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVC 778
           +LA+A+G++    G  IR+IKNLRVC DCH A K+++++TGR+I++RD NRFHHFK G C
Sbjct: 716 RLAVAYGIMRVSSGRPIRVIKNLRVCEDCHNAIKYMARITGRLIILRDNNRFHHFKDGSC 775

Query: 779 SCGDYW 784
           SCGDYW
Sbjct: 776 SCGDYW 781



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 80/266 (30%), Positives = 128/266 (48%), Gaps = 22/266 (8%)

Query: 275 DLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIH 334
           D+   N  IS Y   G+   +LR+F+++     R +S +  G+I  +   G   L   + 
Sbjct: 63  DIKEWNVAISSYMRTGRCNEALRVFKRM----PRWSSVSYNGMISGYLRNGEFELARKLF 118

Query: 335 SFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTE 394
               +  +VS + ++      Y R   +  AR+LF+   E+ + SWN M++GY QNG  +
Sbjct: 119 DEMPERDLVSWNVMIKG----YVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVD 174

Query: 395 EAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVS-TAL 453
           +A S+F  M       N V+ +++LSA  Q   +        L KSR  E+   VS   L
Sbjct: 175 DARSVFDRMPEK----NDVSWNALLSAYVQNSKMEE---ACMLFKSR--ENWALVSWNCL 225

Query: 454 IDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSG 513
           +  + K   IVEAR+ FD M+ +  V+WNT+I+GY   G   EA QLF E     +    
Sbjct: 226 LGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDV---- 281

Query: 514 VTFLSVLYACSHAGLVREGDEIFQSM 539
            T+ +++       +V E  E+F  M
Sbjct: 282 FTWTAMVSGYIQNRMVEEARELFDKM 307



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 35/131 (26%), Positives = 65/131 (49%), Gaps = 8/131 (6%)

Query: 374 EKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKW 433
           +  +  WN  I+ Y + G   EA+ +F+ M       + V+ + ++S   + G   L + 
Sbjct: 61  DSDIKEWNVAISSYMRTGRCNEALRVFKRMPRW----SSVSYNGMISGYLRNGEFELARK 116

Query: 434 VHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGH 493
           + + +  R+  S       +I  Y +  N+ +ARELF++M  +   +WNTM+SGY  +G 
Sbjct: 117 LFDEMPERDLVS----WNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGC 172

Query: 494 GLEALQLFSEM 504
             +A  +F  M
Sbjct: 173 VDDARSVFDRM 183


>gi|449460189|ref|XP_004147828.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g14470-like [Cucumis sativus]
          Length = 759

 Score =  478 bits (1230), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 290/798 (36%), Positives = 427/798 (53%), Gaps = 91/798 (11%)

Query: 24  QLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKA-TCYARALFFSIPKPDLFLFNVIIRGF 82
           QL Q H  ++ +   +    V+ L    +   A   Y  ++F S P PD  +++ +++ +
Sbjct: 16  QLRQFHGHLVHNSLHSHNYWVSLLLINCTRLHAHPAYVDSIFTSSPSPDASVYSCMLKYY 75

Query: 83  SNNEMPKSSICFY--THLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYG 140
           S        +  +  TH   +  L P  F Y +++  A        G L H + +  G+ 
Sbjct: 76  SRMGAHNQVVSLFKCTH---SLNLRPQPFVYIYLIKLAGKS-----GNLFHAYVLKLGHI 127

Query: 141 SDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDM 200
            D F+  A++D+Y K   V  AR +F++M E+    WNSMISG  K+    +++ +F  M
Sbjct: 128 DDHFIRNAILDMYAKNGQVDLARNLFEQMAERTLADWNSMISGCWKSGNETEAVVLFNMM 187

Query: 201 -VRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCG 259
             RN  TW                                         T +V+ Y+K G
Sbjct: 188 PARNIITW-----------------------------------------TSMVTGYAKMG 206

Query: 260 EVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIP 319
           ++E A   F ++    ++S NAM S Y      + +L LF Q+L      + +T V  I 
Sbjct: 207 DLESARRYFDEMPERSVVSWNAMQSAYAQKECPKEALNLFHQMLEEGITPDDTTWVVTIS 266

Query: 320 VFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTAL--------------------------- 352
                G   L + I     +  IV NS V TAL                           
Sbjct: 267 SCSSIGDPTLADSILRMIDQKHIVLNSFVKTALLDMHAKFGNLEIARNIFDELGSQRNAV 326

Query: 353 -----STVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEM-QAS 406
                 + Y+R+ ++  AR+LFD   ++ + SWN+MIAGY QNG +  +I LF+EM    
Sbjct: 327 TWNIMISAYTRVGKLSLARELFDNMPKRDVVSWNSMIAGYAQNGESAMSIELFKEMISCM 386

Query: 407 KVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEA 466
            + P+ VT++S+LSAC  +GA+ L  WV ++V+ +N +  I    +LI MY+KCG++ +A
Sbjct: 387 DIQPDEVTIASVLSACGHIGALKLSYWVLDIVREKNIKLGISGFNSLIFMYSKCGSVADA 446

Query: 467 RELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHA 526
             +F  M  +  V++NT+ISG+  +GHG EA++L   M   GI P  VT++ VL ACSHA
Sbjct: 447 HRIFQTMGTRDVVSFNTLISGFAANGHGKEAIKLVLTMEEEGIEPDHVTYIGVLTACSHA 506

Query: 527 GLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGA 586
           GL+ EG  +F+S+       P  +HYACMVD+LGRAG+L++A   I+ + ++P   V+G+
Sbjct: 507 GLLNEGKNVFKSIQ-----APTVDHYACMVDLLGRAGELDEAKMLIQSMPMKPHAGVYGS 561

Query: 587 LLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKL 646
           LL A  IHK   L  +A+ KLFEL+P+N+G +VLLSNIY++   +     VR+++KK  L
Sbjct: 562 LLNASRIHKRVGLGELAASKLFELEPQNLGNYVLLSNIYASFGRWEDVKRVREMMKKGGL 621

Query: 647 AKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEE 706
            K+ G + +E  G  H FT GD+ H QS  IY +L +L  KM+  GF  +   AL DVEE
Sbjct: 622 KKSVGMSWVEYKGQVHKFTVGDRSHEQSKDIYKLLAELERKMKRVGFVADKSCALRDVEE 681

Query: 707 EEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRD 766
           EEKE M+  HSEKLAI F L+ +E GT IR++KNLR+CLDCHTA K ISK+ GR IVVRD
Sbjct: 682 EEKEEMLGTHSEKLAICFALLISEVGTTIRVVKNLRICLDCHTAIKMISKLEGREIVVRD 741

Query: 767 ANRFHHFKGGVCSCGDYW 784
            NRFH F  G+CSC DYW
Sbjct: 742 NNRFHCFSEGMCSCHDYW 759


>gi|297734304|emb|CBI15551.3| unnamed protein product [Vitis vinifera]
          Length = 685

 Score =  478 bits (1230), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 259/656 (39%), Positives = 376/656 (57%), Gaps = 38/656 (5%)

Query: 155 KFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDM-VRNGGTWLDSTSV 213
           ++  +++AR +FD+MPE+D V WN+M+SG  +N   +++  +F +M  +N  +W     +
Sbjct: 42  RYRNLRAARLLFDQMPERDVVSWNAMLSGYAQNGYVKEAKEIFDEMPCKNSISW---NGM 98

Query: 214 AAVLPAVAEVQELRLGME-----------------------IQCLGL--KLGFHDHVYVL 248
            A       +++ R   E                       +   G+  ++   D V   
Sbjct: 99  LAAYVQNGRIEDARRLFESKADWELISWNCMMGGYVKRNRLVDARGIFDRMPERDEVSWN 158

Query: 249 TGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAER 308
           T ++S Y++ GE+  A+ LF +    D+ +  AM+SGY  NG  + + R+F  +      
Sbjct: 159 T-MISGYAQNGELLEAQRLFEESPVRDVFTWTAMVSGYVQNGMLDEARRVFDGMPEK--- 214

Query: 309 VNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKL 368
            NS +   +I  +     +     +     ++    N S    + T Y++  ++  AR  
Sbjct: 215 -NSVSWNAIIAGYVQCKRMDQAREL----FEAMPCQNVSSWNTMITGYAQNGDIAQARNF 269

Query: 369 FDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAI 428
           FD   ++   SW A+IAGY Q+G  EEA+ LF EM+      N  T +S LS CA++ A+
Sbjct: 270 FDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTLSTCAEIAAL 329

Query: 429 SLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGY 488
            LGK VH  V     ES  YV  AL+ MY KCGNI +A  +F+ +  K  V+WNTMI+GY
Sbjct: 330 ELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIEEKEVVSWNTMIAGY 389

Query: 489 GLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPL 548
             HG G EAL LF  M  +GI P  VT + VL ACSH GLV +G E F SM  D+G    
Sbjct: 390 ARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLVDKGTEYFYSMTQDYGITAN 449

Query: 549 AEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLF 608
           ++HY CM+D+LGRAG+L+ A   +K +  EP  A WGALLGA  IH +T L   A++ +F
Sbjct: 450 SKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLGASRIHGNTELGEKAAKMIF 509

Query: 609 ELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGD 668
           E++P+N G +VLLSN+Y+A   +     +R  ++ R + K PG + +EV    H FT GD
Sbjct: 510 EMEPDNSGMYVLLSNLYAASGRWGDVGRMRLRMRDRGVKKVPGYSWVEVQNKIHTFTVGD 569

Query: 669 QLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIA 728
            +HP+   IY  LE+L+ KM++ G+ + T   LHDVEEEEK  M+K HSEKLA+AFG++A
Sbjct: 570 SVHPERDRIYTFLEELDLKMKKEGYVSSTKLVLHDVEEEEKVHMLKYHSEKLAVAFGILA 629

Query: 729 TEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
              G  IR+IKNLRVC DCH A K ISK+ GR+I++RD++RFHHF GG CSCGDYW
Sbjct: 630 IPAGRPIRVIKNLRVCEDCHNAMKHISKIVGRLIILRDSHRFHHFNGGQCSCGDYW 685



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 126/494 (25%), Positives = 230/494 (46%), Gaps = 42/494 (8%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           AR LF  +P+ D+  +N ++ G++ N   K +   +  +    +++ +    ++V +   
Sbjct: 49  ARLLFDQMPERDVVSWNAMLSGYAQNGYVKEAKEIFDEMPCKNSISWNGMLAAYVQNGRI 108

Query: 120 ACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNS 179
               R            S    +L     ++  Y K + +  AR +FD+MPE+D V WN+
Sbjct: 109 EDARR---------LFESKADWELISWNCMMGGYVKRNRLVDARGIFDRMPERDEVSWNT 159

Query: 180 MISGLMKNCCFQDSIWVFGDM-VRNGGTWLDSTSVAAVLPAVAEVQELRLGME------- 231
           MISG  +N    ++  +F +  VR+  TW    S       + E + +  GM        
Sbjct: 160 MISGYAQNGELLEAQRLFEESPVRDVFTWTAMVSGYVQNGMLDEARRVFDGMPEKNSVSW 219

Query: 232 -------IQCLGLKLGFH-------DHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLI 277
                  +QC  +             +V     +++ Y++ G++ +A   F  + + D I
Sbjct: 220 NAIIAGYVQCKRMDQARELFEAMPCQNVSSWNTMITGYAQNGDIAQARNFFDRMPQRDSI 279

Query: 278 SCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFC 337
           S  A+I+GY  +G  E +L LF ++    ER+N ST    +        L L   +H   
Sbjct: 280 SWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTLSTCAEIAALELGKQVHGRV 339

Query: 338 LKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAI 397
           +K+G+ S   V  AL  +Y +   ++ A  +F+   EK + SWN MIAGY ++G  +EA+
Sbjct: 340 VKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIEEKEVVSWNTMIAGYARHGFGKEAL 399

Query: 398 SLFQEMQASKVAPNPVTVSSILSACAQLGAISLG-KWVHELVKSRNFESNIYVSTALIDM 456
            LF+ M+ + + P+ VT+  +LSAC+  G +  G ++ + + +     +N    T +ID+
Sbjct: 400 MLFESMKKTGILPDDVTMVGVLSACSHTGLVDKGTEYFYSMTQDYGITANSKHYTCMIDL 459

Query: 457 YAKCGNIVEARELFDLMSHKSE-VTWNTMISGYGLHGH---GLEALQLFSEML--HSGIR 510
             + G + +A+ L   M  + +  TW  ++    +HG+   G +A ++  EM   +SG+ 
Sbjct: 460 LGRAGRLDDAQNLMKNMPFEPDAATWGALLGASRIHGNTELGEKAAKMIFEMEPDNSGM- 518

Query: 511 PSGVTFLSVLYACS 524
                 LS LYA S
Sbjct: 519 ---YVLLSNLYAAS 529



 Score =  112 bits (281), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 95/402 (23%), Positives = 185/402 (46%), Gaps = 41/402 (10%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNN-EMPKSSICFYTHLRKNTALTPDNFTYSFVLSA- 117
           AR +F  +P+ D   +N +I G++ N E+ ++   F        +   D FT++ ++S  
Sbjct: 142 ARGIFDRMPERDEVSWNTMISGYAQNGELLEAQRLF------EESPVRDVFTWTAMVSGY 195

Query: 118 -ASACCDRSIGVL--------LHGHAIVSGY--------GSDLFVGA---------ALVD 151
             +   D +  V         +  +AI++GY          +LF             ++ 
Sbjct: 196 VQNGMLDEARRVFDGMPEKNSVSWNAIIAGYVQCKRMDQARELFEAMPCQNVSSWNTMIT 255

Query: 152 LYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDST 211
            Y +   +  AR  FD+MP++D++ W ++I+G  ++   ++++ +F +M R+G   L+ +
Sbjct: 256 GYAQNGDIAQARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGER-LNRS 314

Query: 212 SVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDI 271
           +  + L   AE+  L LG ++    +K G     YV   L+  Y KCG ++ A ++F  I
Sbjct: 315 TFTSTLSTCAEIAALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGI 374

Query: 272 VRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHL-T 330
              +++S N MI+GY  +G  + +L LF  +  +    +  T+VG++      G +   T
Sbjct: 375 EEKEVVSWNTMIAGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLVDKGT 434

Query: 331 NCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESS-EKSLASWNAMIAGYTQ 389
              +S     GI +NS   T +  +  R   ++ A+ L      E   A+W A++     
Sbjct: 435 EYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLGASRI 494

Query: 390 NG---LTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAI 428
           +G   L E+A  +  EM+        V +S++ +A  + G +
Sbjct: 495 HGNTELGEKAAKMIFEMEPDNSGMY-VLLSNLYAASGRWGDV 535


>gi|334185563|ref|NP_188975.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75274454|sp|Q9LW63.1|PP251_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g23330
 gi|11994318|dbj|BAB02277.1| unnamed protein product [Arabidopsis thaliana]
 gi|332643232|gb|AEE76753.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 715

 Score =  478 bits (1229), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 244/655 (37%), Positives = 374/655 (57%), Gaps = 37/655 (5%)

Query: 166 FDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQE 225
           F  +     + W S+I        F  ++  F +M R  G   D     +VL +   + +
Sbjct: 62  FKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEM-RASGRCPDHNVFPSVLKSCTMMMD 120

Query: 226 LRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSK-----------------------CGE-- 260
           LR G  +    ++LG    +Y    L++ Y+K                        G+  
Sbjct: 121 LRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDED 180

Query: 261 -----------VERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERV 309
                      ++    +F  + R D++S N +I+GY  +G  E +LR+ R++  +  + 
Sbjct: 181 VKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKP 240

Query: 310 NSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLF 369
           +S T+  ++P+F  +  +     IH + ++ GI S+  + ++L  +Y++   +E + ++F
Sbjct: 241 DSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVF 300

Query: 370 DESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAIS 429
                +   SWN+++AGY QNG   EA+ LF++M  +KV P  V  SS++ ACA L  + 
Sbjct: 301 SRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLH 360

Query: 430 LGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYG 489
           LGK +H  V    F SNI++++AL+DMY+KCGNI  AR++FD M+   EV+W  +I G+ 
Sbjct: 361 LGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHA 420

Query: 490 LHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLA 549
           LHGHG EA+ LF EM   G++P+ V F++VL ACSH GLV E    F SM   +G     
Sbjct: 421 LHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQEL 480

Query: 550 EHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFE 609
           EHYA + D+LGRAG+LE+A  FI  + VEP  +VW  LL +C +HK+  LA   +EK+F 
Sbjct: 481 EHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFT 540

Query: 610 LDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQ 669
           +D EN+G +VL+ N+Y++   + + A +R  ++K+ L K P C+ IE+    H F SGD+
Sbjct: 541 VDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDR 600

Query: 670 LHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIAT 729
            HP    I   L+ +  +M + G+  +T   LHDV+EE K  ++  HSE+LA+AFG+I T
Sbjct: 601 SHPSMDKINEFLKAVMEQMEKEGYVADTSGVLHDVDEEHKRELLFGHSERLAVAFGIINT 660

Query: 730 EPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           EPGT IR+ KN+R+C DCH A KFISK+T R I+VRD +RFHHF  G CSCGDYW
Sbjct: 661 EPGTTIRVTKNIRICTDCHVAIKFISKITEREIIVRDNSRFHHFNRGNCSCGDYW 715



 Score =  202 bits (513), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 140/536 (26%), Positives = 248/536 (46%), Gaps = 66/536 (12%)

Query: 8   SRNLFLSLLKGA---KTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARAL- 63
           S+ L  +L+K     K++SQ  Q HAQ I             L+H  +    + Y     
Sbjct: 4   SKALIKTLIKNPTRIKSKSQAKQLHAQFI---------RTQSLSHTSASIVISIYTNLKL 54

Query: 64  -------FFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLS 116
                  F ++  P +  +  +IR F++  +   ++  +  +R  +   PD+  +  VL 
Sbjct: 55  LHEALLLFKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRA-SGRCPDHNVFPSVLK 113

Query: 117 AASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKF-------------------- 156
           + +   D   G  +HG  +  G   DL+ G AL+++Y K                     
Sbjct: 114 SCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRT 173

Query: 157 ----------------SWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDM 200
                             + S R+VF+ MP KD V +N++I+G  ++  ++D++     M
Sbjct: 174 SNSGDEDVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDAL----RM 229

Query: 201 VRNGGTW---LDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSK 257
           VR  GT     DS ++++VLP  +E  ++  G EI    ++ G    VY+ + LV  Y+K
Sbjct: 230 VREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAK 289

Query: 258 CGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGL 317
              +E +E +F  +   D IS N++++GY  NG+   +LRLFRQ++ +  +  +     +
Sbjct: 290 SARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSV 349

Query: 318 IPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSL 377
           IP       LHL   +H + L+ G  SN  + +AL  +YS+   ++AARK+FD  +    
Sbjct: 350 IPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDE 409

Query: 378 ASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLG-KWVHE 436
            SW A+I G+  +G   EA+SLF+EM+   V PN V   ++L+AC+ +G +     + + 
Sbjct: 410 VSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNS 469

Query: 437 LVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMS-HKSEVTWNTMISGYGLH 491
           + K       +    A+ D+  + G + EA      M    +   W+T++S   +H
Sbjct: 470 MTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVH 525


>gi|356569774|ref|XP_003553071.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Glycine max]
          Length = 775

 Score =  478 bits (1229), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 277/811 (34%), Positives = 420/811 (51%), Gaps = 83/811 (10%)

Query: 14  SLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATC----YARALFFSIPK 69
           SLL+  K      Q  +Q I+ G   D    ++L +  S    T     Y+  +F  +  
Sbjct: 8   SLLQSCKCPRHFKQLLSQTILTGLITDPYAASRLIN-FSSHSTTLVPFHYSLRIFNHLRN 66

Query: 70  PDLFLFNVIIRG--FSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIG 127
           P+ F +N I+R   +  N  P  ++  Y     + A  PD++TY  +L   +A      G
Sbjct: 67  PNTFTWNTIMRAHLYLQNS-PHQALLHYKLFLASHA-KPDSYTYPILLQCCAARVSEFEG 124

Query: 128 VLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKN 187
             LH HA+ SG+  D++V   L++LY     V SAR+VF++ P  D V WN++++G ++ 
Sbjct: 125 RQLHAHAVSSGFDGDVYVRNTLMNLYAVCGSVGSARRVFEESPVLDLVSWNTLLAGYVQA 184

Query: 188 CCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYV 247
              +++  VF  M        +  ++A+                                
Sbjct: 185 GEVEEAERVFEGMP-------ERNTIAS-------------------------------- 205

Query: 248 LTGLVSFYSKCGEVERAELLFRDIV--RPDLISCNAMISGYTCNGKTESSLRLFRQLLAS 305
              +++ + + G VE+A  +F  +     D++S +AM+S Y  N   E +L LF ++  S
Sbjct: 206 -NSMIALFGRKGCVEKARRIFNGVRGRERDMVSWSAMVSCYEQNEMGEEALVLFVEMKGS 264

Query: 306 AERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAA 365
              V+   +V  +       ++ +   +H   +K G+    S+  AL  +YS   E+  A
Sbjct: 265 GVAVDEVVVVSALSACSRVLNVEMGRWVHGLAVKVGVEDYVSLKNALIHLYSSCGEIVDA 324

Query: 366 RKLFDESSE--------------------------------KSLASWNAMIAGYTQNGLT 393
           R++FD+  E                                K + SW+AMI+GY Q+   
Sbjct: 325 RRIFDDGGELLDLISWNSMISGYLRCGSIQDAEMLFYSMPEKDVVSWSAMISGYAQHECF 384

Query: 394 EEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTAL 453
            EA++LFQEMQ   V P+   + S +SAC  L  + LGKW+H  +     + N+ +ST L
Sbjct: 385 SEALALFQEMQLHGVRPDETALVSAISACTHLATLDLGKWIHAYISRNKLQVNVILSTTL 444

Query: 454 IDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSG 513
           IDMY KCG +  A E+F  M  K   TWN +I G  ++G   ++L +F++M  +G  P+ 
Sbjct: 445 IDMYMKCGCVENALEVFYAMEEKGVSTWNAVILGLAMNGSVEQSLNMFADMKKTGTVPNE 504

Query: 514 VTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIK 573
           +TF+ VL AC H GLV +G   F SMIH+H  +   +HY CMVD+LGRAG L++A E I 
Sbjct: 505 ITFMGVLGACRHMGLVNDGRHYFNSMIHEHKIEANIKHYGCMVDLLGRAGLLKEAEELID 564

Query: 574 GLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQ 633
            + + P  A WGALLGAC  H+D  +      KL +L P++ G+HVLLSNIY+++ ++  
Sbjct: 565 SMPMAPDVATWGALLGACRKHRDNEMGERLGRKLIQLQPDHDGFHVLLSNIYASKGNWGN 624

Query: 634 AATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGF 693
              +R ++ +  + K PGC++IE  GT H F +GD+ HPQ   I  ML+ +  K++  G+
Sbjct: 625 VLEIRGIMAQHGVVKTPGCSMIEANGTVHEFLAGDKTHPQINDIEHMLDVVAAKLKIEGY 684

Query: 694 QTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKF 753
              T     D++EEEKE  +  HSEKLA+AFGLI   P T IR+ KNLR+C DCHT  K 
Sbjct: 685 VPTTSEVSLDIDEEEKETALFRHSEKLAVAFGLITISPPTPIRVTKNLRICNDCHTVVKL 744

Query: 754 ISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           ISK   R IVVRD +RFHHFK G CSC D+W
Sbjct: 745 ISKAFDRDIVVRDRHRFHHFKHGACSCMDFW 775


>gi|297596302|ref|NP_001042337.2| Os01g0205200 [Oryza sativa Japonica Group]
 gi|56201494|dbj|BAD72991.1| pentatricopeptide repeat protein -like [Oryza sativa Japonica
           Group]
 gi|255672984|dbj|BAF04251.2| Os01g0205200 [Oryza sativa Japonica Group]
          Length = 658

 Score =  477 bits (1228), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 241/658 (36%), Positives = 383/658 (58%), Gaps = 2/658 (0%)

Query: 127 GVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMK 186
           G+++HG+ +  G+G+   V  AL+  Y K + ++ A  VFD+MP++D + WNS+I G   
Sbjct: 3   GLVVHGYLVKYGFGAQCAVCNALISFYAKSNRIEDALMVFDEMPQRDIISWNSIIGGCAS 62

Query: 187 NCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVY 246
           N  +  ++ +F  M   G   LDST++ +V+PA  +     +G  +    ++ G      
Sbjct: 63  NGLYDKAVELFVRMWLEGQE-LDSTTLLSVMPACVQSHYSFIGGVVHGYSVRTGLISETS 121

Query: 247 VLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASA 306
           +   L+  YS C +      +FR++ + +++S  AMI+ YT  G  +    LF+++    
Sbjct: 122 LGNALLDMYSNCSDWRSTNKIFRNMEQKNVVSWTAMITSYTRAGHFDKVAGLFQEMGLEG 181

Query: 307 ERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAAR 366
            R +   I   +  F     L     +H + +++GI     V  AL  +Y +   ME AR
Sbjct: 182 IRPDVFAITSALDAFAGNESLKHGKSVHGYAIRNGIEEVLPVANALMEMYVKCGYMEEAR 241

Query: 367 KLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLG 426
            +FD  ++K   SWN +I GY+++ L  EA +LF EM   ++ PN VT++ IL A A L 
Sbjct: 242 FIFDHVTKKDTISWNTLIGGYSRSNLANEAFTLFNEMLL-QLRPNAVTMACILPAAASLS 300

Query: 427 AISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMIS 486
           ++  G+ +H     R +  + +V+ AL+DMY KCG ++ AR LFD++++K+ ++W  MI+
Sbjct: 301 SLERGREMHAYAVRRGYLEDNFVANALVDMYVKCGALLLARRLFDMLTNKNLISWTIMIA 360

Query: 487 GYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFK 546
           GYG+HG G +A+ LF +M  SGI+P   +F ++LYACSH+GL  EG   F +M ++H  +
Sbjct: 361 GYGMHGRGRDAIALFEQMKGSGIQPDAGSFSAILYACSHSGLRDEGWRFFNAMRNEHRIE 420

Query: 547 PLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEK 606
           P  +HYACMVD+L   G L++A EFI+ + +EP  ++W +LL  C IH++  LA   +E 
Sbjct: 421 PKLKHYACMVDLLCHTGNLKEAYEFIETMPIEPDSSIWVSLLRGCRIHRNVKLAEKVAEM 480

Query: 607 LFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTS 666
           +FEL+PEN GY+VLL+NIY+    +     ++  V  R L +  GC+ IEV G  H+F +
Sbjct: 481 VFELEPENTGYYVLLANIYAEAERWEAVRKLKNKVGGRGLRENTGCSWIEVRGKAHIFFA 540

Query: 667 GDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGL 726
            ++ HPQ   I   L+ +  +M+E G   +   AL   ++   +  +  HS KLA+AFG+
Sbjct: 541 ENRNHPQGMRIAEFLDDVARRMQEEGHDPKKKYALMGADDAVHDEALCGHSSKLAVAFGV 600

Query: 727 IATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           +    G  IR+ KN RVC  CH A KFISK+ GR I++RD+NRFHHF+ G CSC  YW
Sbjct: 601 LNLSQGRPIRVTKNSRVCSHCHEAAKFISKMCGREIILRDSNRFHHFEEGRCSCRGYW 658



 Score =  182 bits (463), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 136/549 (24%), Positives = 262/549 (47%), Gaps = 33/549 (6%)

Query: 28  THAQIIIHGFQ------NDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRG 81
            H  ++ +GF       N L +    ++R+ D      A  +F  +P+ D+  +N II G
Sbjct: 6   VHGYLVKYGFGAQCAVCNALISFYAKSNRIED------ALMVFDEMPQRDIISWNSIIGG 59

Query: 82  FSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRS---IGVLLHGHAIVSG 138
            ++N +   ++  +  +     L       + +LS   AC       IG ++HG+++ +G
Sbjct: 60  CASNGLYDKAVELFVRM----WLEGQELDSTTLLSVMPACVQSHYSFIGGVVHGYSVRTG 115

Query: 139 YGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFG 198
             S+  +G AL+D+Y   S  +S  K+F  M +K+ V W +MI+   +   F     +F 
Sbjct: 116 LISETSLGNALLDMYSNCSDWRSTNKIFRNMEQKNVVSWTAMITSYTRAGHFDKVAGLFQ 175

Query: 199 DMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKC 258
           +M    G   D  ++ + L A A  + L+ G  +    ++ G  + + V   L+  Y KC
Sbjct: 176 EMGLE-GIRPDVFAITSALDAFAGNESLKHGKSVHGYAIRNGIEEVLPVANALMEMYVKC 234

Query: 259 GEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLI 318
           G +E A  +F  + + D IS N +I GY+ +     +  LF ++L    R N+ T+  ++
Sbjct: 235 GYMEEARFIFDHVTKKDTISWNTLIGGYSRSNLANEAFTLFNEMLLQL-RPNAVTMACIL 293

Query: 319 PVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLA 378
           P       L     +H++ ++ G + ++ V  AL  +Y +   +  AR+LFD  + K+L 
Sbjct: 294 PAAASLSSLERGREMHAYAVRRGYLEDNFVANALVDMYVKCGALLLARRLFDMLTNKNLI 353

Query: 379 SWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLG-KWVHEL 437
           SW  MIAGY  +G   +AI+LF++M+ S + P+  + S+IL AC+  G    G ++ + +
Sbjct: 354 SWTIMIAGYGMHGRGRDAIALFEQMKGSGIQPDAGSFSAILYACSHSGLRDEGWRFFNAM 413

Query: 438 VKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVT-WNTMISGYGLHGHGLE 496
                 E  +     ++D+    GN+ EA E  + M  + + + W +++ G  +H   ++
Sbjct: 414 RNEHRIEPKLKHYACMVDLLCHTGNLKEAYEFIETMPIEPDSSIWVSLLRGCRIH-RNVK 472

Query: 497 ALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGD--EIFQSMIHDHGFKPLAEHYAC 554
             +  +EM+   + P    +  +L     A +  E +  E  + + +  G + L E+  C
Sbjct: 473 LAEKVAEMVFE-LEPENTGYYVLL-----ANIYAEAERWEAVRKLKNKVGGRGLRENTGC 526

Query: 555 -MVDILGRA 562
             +++ G+A
Sbjct: 527 SWIEVRGKA 535


>gi|224124638|ref|XP_002330073.1| predicted protein [Populus trichocarpa]
 gi|222871498|gb|EEF08629.1| predicted protein [Populus trichocarpa]
          Length = 793

 Score =  477 bits (1228), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 274/802 (34%), Positives = 419/802 (52%), Gaps = 74/802 (9%)

Query: 16  LKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSD--FKATCYARALFFSIPKPDLF 73
           L+  +   Q  Q  +Q+I+ GF  D    ++L    ++  F     +  +F  I  P+ F
Sbjct: 33  LQKCQNIKQFNQILSQMILSGFFKDSFAASRLLKFSTELPFININQSYQIFSHIENPNGF 92

Query: 74  LFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGH 133
           + N +++G+     P  +I  Y  + ++  +  DN+TY  +  + S       G  +  H
Sbjct: 93  ICNTMMKGYMQRNSPCKAIWVYKFMLESN-VAADNYTYPILFQSCSIRLAEFDGKCIQDH 151

Query: 134 AIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDS 193
            +  G+ SD+++   L+++Y     +  ARKVFD     D V WNSM++G +        
Sbjct: 152 VLKVGFDSDVYIQNTLINMYAVCGNLSDARKVFDGSSVLDMVSWNSMLAGYV-------- 203

Query: 194 IWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVS 253
                 +V N                V E +++   M             +V     ++ 
Sbjct: 204 ------LVGN----------------VEEAKDVYDRMP----------ERNVIASNSMIV 231

Query: 254 FYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSST 313
            + K G VE A  LF ++ + DL+S +A+IS Y  N   E +L LF+++ A+   V+   
Sbjct: 232 LFGKKGNVEEACKLFNEMKQKDLVSWSALISCYEQNEMYEEALILFKEMNANGIMVDEVV 291

Query: 314 IVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYS---------------- 357
           ++ ++        +     +H   +K GI +  ++  AL  +YS                
Sbjct: 292 VLSVLSACSRLLVVITGKLVHGLVVKVGIETYVNLQNALIHMYSSCEEVVTAQKLFSESC 351

Query: 358 ---------------RLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQE 402
                          +  E+E AR LFD   +K   SW+AMI+GY Q     E + LFQE
Sbjct: 352 CLDQISWNSMISGYVKCGEIEKARALFDSMPDKDNVSWSAMISGYAQQDRFTETLVLFQE 411

Query: 403 MQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGN 462
           MQ     P+   + S++SAC  L A+  GKW+H  ++    + NI + T LI+MY K G 
Sbjct: 412 MQIEGTKPDETILVSVISACTHLAALDQGKWIHAYIRKNGLKINIILGTTLINMYMKLGC 471

Query: 463 IVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYA 522
           + +A E+F  +  K   TWN +I G  ++G   ++L+ FSEM   G+ P+ +TF++VL A
Sbjct: 472 VEDALEVFKGLEEKGVSTWNALILGLAMNGLVDKSLKTFSEMKEHGVTPNEITFVAVLGA 531

Query: 523 CSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPA 582
           C H GLV EG   F SMI +H   P  +HY CMVD+LGRAG L++A E I+ + + P  +
Sbjct: 532 CRHMGLVDEGHRHFNSMIQEHKIGPNIKHYGCMVDLLGRAGMLKEAEELIESMPMAPDVS 591

Query: 583 VWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVK 642
            WGALLGAC  + D         KL EL P++ G++VLLSNIY+++ +++    VR +++
Sbjct: 592 TWGALLGACKKYGDNETGERIGRKLVELHPDHDGFNVLLSNIYASKGNWVDVLEVRGMMR 651

Query: 643 KRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALH 702
           +  + K PGC++IE  G  H F +GD+ HPQ+  I  ML+++  K++  G+  +T     
Sbjct: 652 QHGVVKTPGCSMIEAHGRVHEFLAGDKTHPQNEHIEHMLDEMAKKLKLEGYAPDTREVSL 711

Query: 703 DVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVI 762
           D++EEEKE  +  HSEKLAIAFGLIA +P T IRI+KNLR+C DCHTA K ISK   R I
Sbjct: 712 DIDEEEKETTLFRHSEKLAIAFGLIAIDPPTPIRIVKNLRICNDCHTAAKLISKAFNREI 771

Query: 763 VVRDANRFHHFKGGVCSCGDYW 784
           VVRD +RFHHFK G CSC DYW
Sbjct: 772 VVRDRHRFHHFKQGSCSCMDYW 793


>gi|449476974|ref|XP_004154891.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g14470-like [Cucumis sativus]
          Length = 759

 Score =  477 bits (1228), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 289/798 (36%), Positives = 427/798 (53%), Gaps = 91/798 (11%)

Query: 24  QLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKA-TCYARALFFSIPKPDLFLFNVIIRGF 82
           QL Q H  ++ +   +    V+ L    +   A   Y  ++F S P PD  +++ +++ +
Sbjct: 16  QLRQFHGHLVHNSLHSHNYWVSLLLINCTRLHAHPAYVDSIFTSSPSPDASVYSCMLKYY 75

Query: 83  SNNEMPKSSICFY--THLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYG 140
           S        +  +  TH   +  L P  F Y +++  A        G + H + +  G+ 
Sbjct: 76  SRMGAHNQVVSLFKCTH---SLNLRPQPFVYIYLIKLAGKS-----GNMFHAYVLKLGHI 127

Query: 141 SDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDM 200
            D F+  A++D+Y K   V  AR +F++M E+    WNSMISG  K+    +++ +F  M
Sbjct: 128 DDHFIRNAILDMYAKNGQVDLARNLFEQMAERTLADWNSMISGCWKSGNETEAVVLFNMM 187

Query: 201 -VRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCG 259
             RN  TW                                         T +V+ Y+K G
Sbjct: 188 PARNIITW-----------------------------------------TSMVTGYAKMG 206

Query: 260 EVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIP 319
           ++E A   F ++    ++S NAM S Y      + +L LF Q+L      + +T V  I 
Sbjct: 207 DLESARRYFDEMPERSVVSWNAMQSAYAQKECPKEALNLFHQMLEEGITPDDTTWVVTIS 266

Query: 320 VFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTAL--------------------------- 352
                G   L + I     +  IV NS V TAL                           
Sbjct: 267 SCSSIGDPTLADSILRMIDQKHIVLNSFVKTALLDMHAKFGNLEIARNIFDELGSQRNAV 326

Query: 353 -----STVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEM-QAS 406
                 + Y+R+ ++  AR+LFD   ++ + SWN+MIAGY QNG +  +I LF+EM    
Sbjct: 327 TWNIMISAYTRVGKLSLARELFDNMPKRDVVSWNSMIAGYAQNGESAMSIELFKEMISCM 386

Query: 407 KVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEA 466
            + P+ VT++S+LSAC  +GA+ L  WV ++V+ +N +  I    +LI MY+KCG++ +A
Sbjct: 387 DIQPDEVTIASVLSACGHIGALKLSYWVLDIVREKNIKLGISGFNSLIFMYSKCGSVADA 446

Query: 467 RELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHA 526
             +F  M  +  V++NT+ISG+  +GHG EA++L   M   GI P  VT++ VL ACSHA
Sbjct: 447 HRIFQTMGTRDVVSFNTLISGFAANGHGKEAIKLVLTMEEEGIEPDHVTYIGVLTACSHA 506

Query: 527 GLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGA 586
           GL+ EG  +F+S+       P  +HYACMVD+LGRAG+L++A   I+ + ++P   V+G+
Sbjct: 507 GLLNEGKNVFKSIQ-----APTVDHYACMVDLLGRAGELDEAKMLIQSMPMKPHAGVYGS 561

Query: 587 LLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKL 646
           LL A  IHK   L  +A+ KLFEL+P+N+G +VLLSNIY++   +     VR+++KK  L
Sbjct: 562 LLNASRIHKRVGLGELAASKLFELEPQNLGNYVLLSNIYASFGRWEDVKRVREMMKKGGL 621

Query: 647 AKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEE 706
            K+ G + +E  G  H FT GD+ H QS  IY +L +L  KM+  GF  +   AL DVEE
Sbjct: 622 KKSVGMSWVEYKGQVHKFTVGDRSHEQSKDIYKLLAELERKMKRVGFVADKSCALRDVEE 681

Query: 707 EEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRD 766
           EEKE M+  HSEKLAI F L+ +E GT IR++KNLR+CLDCHTA K ISK+ GR IVVRD
Sbjct: 682 EEKEEMLGTHSEKLAICFALLISEVGTTIRVVKNLRICLDCHTAIKMISKLEGREIVVRD 741

Query: 767 ANRFHHFKGGVCSCGDYW 784
            NRFH F  G+CSC DYW
Sbjct: 742 NNRFHCFSEGMCSCHDYW 759


>gi|356565531|ref|XP_003550993.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
           chloroplastic-like [Glycine max]
          Length = 628

 Score =  477 bits (1228), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 244/593 (41%), Positives = 354/593 (59%), Gaps = 42/593 (7%)

Query: 230 MEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCN 289
           ++I    L+ G H H  +   L   Y+  G +  +  LF     P++     +I+ +   
Sbjct: 40  LQIHAALLRRGLHHHPILNFKLQRSYASLGHLHHSVTLFHRTPNPNVFLWTHIINAHAHF 99

Query: 290 GKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVL 349
                +L  + Q+L    + N+ T+  L+        LH    +HS  +K G+ S+  V 
Sbjct: 100 DLFHHALSYYSQMLTHPIQPNAFTLSSLLKACT----LHPARAVHSHAIKFGLSSHLYVS 155

Query: 350 TALSTVYSRLNEMEAARKLFDESSEKSLAS------------------------------ 379
           T L   Y+R  ++ +A+KLFD   E+SL S                              
Sbjct: 156 TGLVDAYARGGDVASAQKLFDAMPERSLVSYTAMLTCYAKHGMLPEARVLFEGMGMKDVV 215

Query: 380 -WNAMIAGYTQNGLTEEAISLFQEMQAS-------KVAPNPVTVSSILSACAQLGAISLG 431
            WN MI GY Q+G   EA+  F++M          KV PN +TV ++LS+C Q+GA+  G
Sbjct: 216 CWNVMIDGYAQHGCPNEALVFFRKMMMMMGGNGNGKVRPNEITVVAVLSSCGQVGALECG 275

Query: 432 KWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLH 491
           KWVH  V++   + N+ V TAL+DMY KCG++ +AR++FD+M  K  V WN+MI GYG+H
Sbjct: 276 KWVHSYVENNGIKVNVRVGTALVDMYCKCGSLEDARKVFDVMEGKDVVAWNSMIMGYGIH 335

Query: 492 GHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEH 551
           G   EALQLF EM   G++PS +TF++VL AC+HAGLV +G E+F SM   +G +P  EH
Sbjct: 336 GFSDEALQLFHEMCCIGVKPSDITFVAVLTACAHAGLVSKGWEVFDSMKDGYGMEPKVEH 395

Query: 552 YACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELD 611
           Y CMV++LGRAG++++A + ++ + VEP P +WG LL AC IH + +L    +E L    
Sbjct: 396 YGCMVNLLGRAGRMQEAYDLVRSMEVEPDPVLWGTLLWACRIHSNVSLGEEIAEILVSNG 455

Query: 612 PENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLH 671
             + G +VLLSN+Y+A R+++  A VR ++K   + K PGC+ IEV    H F +GD+ H
Sbjct: 456 LASSGTYVLLSNMYAAARNWVGVAKVRSMMKGSGVEKEPGCSSIEVKNRVHEFVAGDRRH 515

Query: 672 PQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEP 731
           P+S  IY+MLEK+NG ++E  +  +T   LHD+ E+EKE  ++VHSEKLA+AFGLI+T P
Sbjct: 516 PRSKDIYSMLEKMNGWLKERHYTPKTDAVLHDIGEQEKEQSLEVHSEKLALAFGLISTSP 575

Query: 732 GTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           G  I+I+KNLRVCLDCH   K +SK++GR I++RD NRFHHF+ G CSC DYW
Sbjct: 576 GAAIKIVKNLRVCLDCHAVMKIMSKISGRKIIMRDRNRFHHFENGSCSCRDYW 628



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 129/508 (25%), Positives = 216/508 (42%), Gaps = 80/508 (15%)

Query: 5   TPQSRNLFLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALF 64
            P  ++    L+  +K+   L Q HA ++  G  +      KL    +      ++  LF
Sbjct: 19  APVDKDNLALLIDNSKSTHHLLQIHAALLRRGLHHHPILNFKLQRSYASLGHLHHSVTLF 78

Query: 65  FSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDR 124
              P P++FL+  II   ++ ++   ++ +Y+ +  +  + P+ FT S +L A +    R
Sbjct: 79  HRTPNPNVFLWTHIINAHAHFDLFHHALSYYSQMLTHP-IQPNAFTLSSLLKACTLHPAR 137

Query: 125 SIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPE------------- 171
           ++    H HAI  G  S L+V   LVD Y +   V SA+K+FD MPE             
Sbjct: 138 AV----HSHAIKFGLSSHLYVSTGLVDAYARGGDVASAQKLFDAMPERSLVSYTAMLTCY 193

Query: 172 ------------------KDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWL----- 208
                             KD V WN MI G  ++ C  +++  F  M+   G        
Sbjct: 194 AKHGMLPEARVLFEGMGMKDVVCWNVMIDGYAQHGCPNEALVFFRKMMMMMGGNGNGKVR 253

Query: 209 -DSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELL 267
            +  +V AVL +  +V  L  G  +       G   +V V T LV  Y KCG +E A  +
Sbjct: 254 PNEITVVAVLSSCGQVGALECGKWVHSYVENNGIKVNVRVGTALVDMYCKCGSLEDARKV 313

Query: 268 FRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHL 327
           F  +   D+++ N+MI GY  +G ++ +L+LF ++     + +  T V +          
Sbjct: 314 FDVMEGKDVVAWNSMIMGYGIHGFSDEALQLFHEMCCIGVKPSDITFVAV---------- 363

Query: 328 HLTNCIHSFCLKSGIVSNS-SVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAG 386
            LT C H     +G+VS    V  ++   Y                 E  +  +  M+  
Sbjct: 364 -LTACAH-----AGLVSKGWEVFDSMKDGYGM---------------EPKVEHYGCMVNL 402

Query: 387 YTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESN 446
             + G  +EA  L + M+   V P+PV   ++L AC     +SLG+ + E++ S    S+
Sbjct: 403 LGRAGRMQEAYDLVRSME---VEPDPVLWGTLLWACRIHSNVSLGEEIAEILVSNGLASS 459

Query: 447 -IYVSTALIDMYAKCGNIVEARELFDLM 473
             YV   L +MYA   N V   ++  +M
Sbjct: 460 GTYV--LLSNMYAAARNWVGVAKVRSMM 485


>gi|414885035|tpg|DAA61049.1| TPA: hypothetical protein ZEAMMB73_995105 [Zea mays]
          Length = 824

 Score =  477 bits (1228), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 261/728 (35%), Positives = 406/728 (55%), Gaps = 32/728 (4%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSA-- 117
           A  LF ++P+     +N ++ G++ N     ++ F+  + +     PD+F+Y+ +L A  
Sbjct: 126 AERLFAAMPRRSTSTYNTMLAGYAANGRLPQALSFFRSIPR-----PDSFSYNTLLHALG 180

Query: 118 -ASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVL 176
            +S+  D  +  L     +      ++ + +     +     V  AR  FD  PEKD V 
Sbjct: 181 VSSSLAD--VRALFDEMPVKDSVSYNVMISS-----HANHGLVSLARHYFDLAPEKDAVS 233

Query: 177 WNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLG 236
           WN M++  ++N   Q++  +F     +  T  D+ S  A++    +  ++    E Q + 
Sbjct: 234 WNGMLAAYVRNGRIQEARELF-----DSRTEWDAISWNALMAGYVQRSQIE---EAQKMF 285

Query: 237 LKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSL 296
            K+   D V     +VS Y++ G++  A  LF      D+ +  A++SGY  NG  E + 
Sbjct: 286 NKMPQRD-VVSWNTMVSGYARRGDMAEARRLFDVAPIRDVFTWTAIVSGYAQNGMLEEAK 344

Query: 297 RLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVY 356
           R+F  +       N+ +   ++  +     +     +        + S +++LT     Y
Sbjct: 345 RVFDAMPDK----NAVSWNAMMAAYVQRRMMEEAKELFDAMPCRNVASWNTMLTG----Y 396

Query: 357 SRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVS 416
           ++   ++ AR +F    +K   SW AM+A Y+Q G +EE + LF+EM       N    +
Sbjct: 397 AQAGMLDEARAIFGMMPQKDAVSWAAMLAAYSQIGFSEETLQLFKEMGRCGEWVNRSAFA 456

Query: 417 SILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHK 476
            +LS CA + A+  G  +H  +    +    +V  AL+ MY KCG++ EA   F+ M  +
Sbjct: 457 CVLSTCADIAALECGMQLHSRLIKAGYGVGCFVGNALLAMYFKCGSMEEAHSAFEEMEER 516

Query: 477 SEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIF 536
             V+WNTMI+GY  HG G EAL++F  M  +  +P  +T + VL ACSH+GLV +G   F
Sbjct: 517 DVVSWNTMIAGYARHGFGKEALEVFDTMRKTSTKPDDITLVGVLAACSHSGLVEKGISYF 576

Query: 537 QSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKD 596
            SM  D G     EHY CM+D+LGRAG+L++A+  +K +  EP   +WGALLGA  IH++
Sbjct: 577 YSMHRDFGVATKPEHYTCMIDLLGRAGRLDEAVNLMKDMPFEPDSTMWGALLGASRIHRN 636

Query: 597 TNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIE 656
           + L R A+EK+FEL+PEN G +VLLSNIY++   +     +R ++ +R + K PG + IE
Sbjct: 637 SELGRNAAEKIFELEPENAGMYVLLSNIYASSGKWRDVDKMRHIMHERGVKKVPGFSWIE 696

Query: 657 VGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVH 716
           V    H F+ GD +HP+   IYA LE L+ +M++AG+ + T   LHDVEEEEKE M+K H
Sbjct: 697 VQNKVHTFSVGDSVHPEREDIYAFLEDLDIRMKKAGYVSATDMVLHDVEEEEKEHMLKYH 756

Query: 717 SEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGG 776
           SEKLA+A+G++   PG  IR+IKNLRVC DCHTA K IS + GR+I++RD+NRFHHF+ G
Sbjct: 757 SEKLAVAYGILKIPPGRPIRVIKNLRVCRDCHTAFKCISAIEGRLIILRDSNRFHHFRDG 816

Query: 777 VCSCGDYW 784
            CSCGDYW
Sbjct: 817 SCSCGDYW 824



 Score =  139 bits (349), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 121/533 (22%), Positives = 237/533 (44%), Gaps = 39/533 (7%)

Query: 40  DLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLR 99
           D  +   L H L    +    RALF  +P  D   +NV+I   +N+ +   +  ++    
Sbjct: 168 DSFSYNTLLHALGVSSSLADVRALFDEMPVKDSVSYNVMISSHANHGLVSLARHYFDLAP 227

Query: 100 KNTALTPDNFTYSFV----LSAASACCD-RSIGVLLHGHAIVSGY--------------- 139
           +  A++ +    ++V    +  A    D R+    +  +A+++GY               
Sbjct: 228 EKDAVSWNGMLAAYVRNGRIQEARELFDSRTEWDAISWNALMAGYVQRSQIEEAQKMFNK 287

Query: 140 --GSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVF 197
               D+     +V  Y +   +  AR++FD  P +D   W +++SG  +N   +++  VF
Sbjct: 288 MPQRDVVSWNTMVSGYARRGDMAEARRLFDVAPIRDVFTWTAIVSGYAQNGMLEEAKRVF 347

Query: 198 GDMV-RNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYS 256
             M  +N  +W    +       + E +EL   M  +          +V     +++ Y+
Sbjct: 348 DAMPDKNAVSWNAMMAAYVQRRMMEEAKELFDAMPCR----------NVASWNTMLTGYA 397

Query: 257 KCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVG 316
           + G ++ A  +F  + + D +S  AM++ Y+  G +E +L+LF+++    E VN S    
Sbjct: 398 QAGMLDEARAIFGMMPQKDAVSWAAMLAAYSQIGFSEETLQLFKEMGRCGEWVNRSAFAC 457

Query: 317 LIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKS 376
           ++        L     +HS  +K+G      V  AL  +Y +   ME A   F+E  E+ 
Sbjct: 458 VLSTCADIAALECGMQLHSRLIKAGYGVGCFVGNALLAMYFKCGSMEEAHSAFEEMEERD 517

Query: 377 LASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLG-KWVH 435
           + SWN MIAGY ++G  +EA+ +F  M+ +   P+ +T+  +L+AC+  G +  G  + +
Sbjct: 518 VVSWNTMIAGYARHGFGKEALEVFDTMRKTSTKPDDITLVGVLAACSHSGLVEKGISYFY 577

Query: 436 ELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVT-WNTMISGYGLHGHG 494
            + +     +     T +ID+  + G + EA  L   M  + + T W  ++    +H + 
Sbjct: 578 SMHRDFGVATKPEHYTCMIDLLGRAGRLDEAVNLMKDMPFEPDSTMWGALLGASRIHRNS 637

Query: 495 LEALQLFSEMLHSGIRPSGV-TFLSVLYACSHAGLVREGDEIFQSMIHDHGFK 546
                   ++       +G+   LS +YA S  G  R+ D++ + ++H+ G K
Sbjct: 638 ELGRNAAEKIFELEPENAGMYVLLSNIYASS--GKWRDVDKM-RHIMHERGVK 687



 Score =  106 bits (265), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 90/348 (25%), Positives = 158/348 (45%), Gaps = 42/348 (12%)

Query: 252 VSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQL--------- 302
           ++ + + G V  AE LF  + R    + N M++GY  NG+   +L  FR +         
Sbjct: 114 ITAHMRAGRVPDAERLFAAMPRRSTSTYNTMLAGYAANGRLPQALSFFRSIPRPDSFSYN 173

Query: 303 -LASAERVNSSTIVGLIPVF--YPFGHLHLTNCIHSFCLKSGIVS------------NSS 347
            L  A  V SS++  +  +F   P       N + S     G+VS            ++ 
Sbjct: 174 TLLHALGV-SSSLADVRALFDEMPVKDSVSYNVMISSHANHGLVSLARHYFDLAPEKDAV 232

Query: 348 VLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASK 407
               +   Y R   ++ AR+LFD  +E    SWNA++AGY Q    EEA  +F +M    
Sbjct: 233 SWNGMLAAYVRNGRIQEARELFDSRTEWDAISWNALMAGYVQRSQIEEAQKMFNKMPQRD 292

Query: 408 VAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEAR 467
           V    V+ ++++S  A+ G ++  + + ++   R    +++  TA++  YA+ G + EA+
Sbjct: 293 V----VSWNTMVSGYARRGDMAEARRLFDVAPIR----DVFTWTAIVSGYAQNGMLEEAK 344

Query: 468 ELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAG 527
            +FD M  K+ V+WN M++ Y       EA +LF  M    +     ++ ++L   + AG
Sbjct: 345 RVFDAMPDKNAVSWNAMMAAYVQRRMMEEAKELFDAMPCRNV----ASWNTMLTGYAQAG 400

Query: 528 LVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGL 575
           ++ E   IF  M         A  +A M+    + G  E+ L+  K +
Sbjct: 401 MLDEARAIFGMMPQKD-----AVSWAAMLAAYSQIGFSEETLQLFKEM 443



 Score = 45.4 bits (106), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 51/221 (23%), Positives = 89/221 (40%), Gaps = 38/221 (17%)

Query: 454 IDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSG 513
           I  + + G + +A  LF  M  +S  T+NTM++GY  +G   +AL  F     S  RP  
Sbjct: 114 ITAHMRAGRVPDAERLFAAMPRRSTSTYNTMLAGYAANGRLPQALSFF----RSIPRPDS 169

Query: 514 VTFLSVLYACSHAGLVREGDEIFQSM-IHD-------------HGFKPLAEHY------- 552
            ++ ++L+A   +  + +   +F  M + D             HG   LA HY       
Sbjct: 170 FSYNTLLHALGVSSSLADVRALFDEMPVKDSVSYNVMISSHANHGLVSLARHYFDLAPEK 229

Query: 553 -----ACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKL 607
                  M+    R G++++A E       E     W AL+   +       A    +K+
Sbjct: 230 DAVSWNGMLAAYVRNGRIQEARELFDS-RTEWDAISWNALMAGYVQRSQIEEA----QKM 284

Query: 608 FELDPEN--VGYHVLLSNIYSAERDYLQAATVRQVVKKRKL 646
           F   P+   V ++ ++S  Y+   D  +A  +  V   R +
Sbjct: 285 FNKMPQRDVVSWNTMVSG-YARRGDMAEARRLFDVAPIRDV 324


>gi|297849104|ref|XP_002892433.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297338275|gb|EFH68692.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 741

 Score =  477 bits (1227), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 257/692 (37%), Positives = 395/692 (57%), Gaps = 37/692 (5%)

Query: 129 LLHGHAIVSGYGSDLFVGAALVDLYF---KFSWVKSARKVFDKMPEKDTVLWNSMISGLM 185
           L+H   I +G  +  +  + L++L      F  +  A  VF+ + E + ++WN+M  G  
Sbjct: 51  LIHAQMIKTGLHNTNYALSKLLELCVISPHFDGLPYAISVFETIQEPNLLIWNTMFRGHA 110

Query: 186 KNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHV 245
            +     ++ ++  M+ + G   +S +   +L + A+ +  + G +I    LKLG+   +
Sbjct: 111 LSSDPVSALKLYVCMI-SLGLLPNSYTFPFLLKSCAKSKAFKEGQQIHGHVLKLGYDLDL 169

Query: 246 YVLTGLVSFYSKCGE-------------------------------VERAELLFRDIVRP 274
           +V T L+S Y + G                                +E A+ LF +I   
Sbjct: 170 FVHTSLISVYVQNGRLEDARKVFDRSPHRDVVSYTALIKGYASRGYIESAQKLFDEIPVK 229

Query: 275 DLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIH 334
           D++S NAMISGY   G  + +L LF++++ +  R + ST+V ++      G + L   +H
Sbjct: 230 DVVSWNAMISGYAETGNYKEALELFKEMMKTNIRPDESTMVTVVSACAQSGSIELGRQVH 289

Query: 335 SFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTE 394
           S+    G  SN  ++ +L  +YS+  E+E A  LF+    K + SWN +I GYT   L +
Sbjct: 290 SWIDDHGFGSNLKIVNSLMDLYSKCGELETACGLFEGLLYKDVISWNTLIGGYTHMNLYK 349

Query: 395 EAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSR--NFESNIYVSTA 452
           EA+ LFQEM  S   PN VT+ SIL ACA LGAI +G+W+H  +  R  +  +   + T+
Sbjct: 350 EALLLFQEMLRSGERPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKSATNASSLRTS 409

Query: 453 LIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPS 512
           LIDMYAKCG+I  A ++F+ + HKS  +WN MI G+ +HG    A  +FS M   GI P 
Sbjct: 410 LIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADAAFDIFSRMRKIGIEPD 469

Query: 513 GVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFI 572
            +TF+ +L ACS +G++  G  IF++M  D+   P  EHY CM+D+LG +G  ++A E I
Sbjct: 470 DITFVGLLSACSRSGMLDLGRHIFRTMTQDYKITPKLEHYGCMIDLLGHSGLFKEAEEMI 529

Query: 573 KGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYL 632
             + +EP   +W +LL AC I  +  L    ++ L +++PEN G +VLLSNIY+    + 
Sbjct: 530 NNMEMEPDGVIWCSLLKACKIRGNVELGESFAQNLIKIEPENPGCYVLLSNIYATAGRWN 589

Query: 633 QAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAG 692
           + A +R ++  + + K PGC+ IE+    H F  GD+ HP++  IY MLE++   + +AG
Sbjct: 590 EVAKIRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAG 649

Query: 693 FQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATK 752
           F  +T   L ++EEE KE  ++ HSEKLAIAFGLI+T+PGT++ I+KNLRVC +CH ATK
Sbjct: 650 FVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATK 709

Query: 753 FISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
            ISK+  R I+ RD  RFHHF+ GVCSC DYW
Sbjct: 710 LISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741



 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 169/611 (27%), Positives = 288/611 (47%), Gaps = 82/611 (13%)

Query: 13  LSLLKGAKTQSQLTQTHAQIIIHGFQND---LSTVTKLAHRLSDFKATCYARALFFSIPK 69
           LSLL   KT   L   HAQ+I  G  N    LS + +L      F    YA ++F +I +
Sbjct: 37  LSLLHNCKTLQSLRLIHAQMIKTGLHNTNYALSKLLELCVISPHFDGLPYAISVFETIQE 96

Query: 70  PDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVL 129
           P+L ++N + RG + +  P S++  Y  +  +  L P+++T+ F+L + +       G  
Sbjct: 97  PNLLIWNTMFRGHALSSDPVSALKLYVCM-ISLGLLPNSYTFPFLLKSCAKSKAFKEGQQ 155

Query: 130 LHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDK--------------------- 168
           +HGH +  GY  DLFV  +L+ +Y +   ++ ARKVFD+                     
Sbjct: 156 IHGHVLKLGYDLDLFVHTSLISVYVQNGRLEDARKVFDRSPHRDVVSYTALIKGYASRGY 215

Query: 169 ----------MPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLP 218
                     +P KD V WN+MISG  +   +++++ +F +M++      D +++  V+ 
Sbjct: 216 IESAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKEMMKT-NIRPDESTMVTVVS 274

Query: 219 AVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLIS 278
           A A+   + LG ++       GF  ++ ++  L+  YSKCGE+E A  LF  ++  D+IS
Sbjct: 275 ACAQSGSIELGRQVHSWIDDHGFGSNLKIVNSLMDLYSKCGELETACGLFEGLLYKDVIS 334

Query: 279 CNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFC- 337
            N +I GYT     + +L LF+++L S ER N  T++ ++P     G + +   IH +  
Sbjct: 335 WNTLIGGYTHMNLYKEALLLFQEMLRSGERPNDVTMLSILPACAHLGAIDIGRWIHVYID 394

Query: 338 --LKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEE 395
             LKS   + SS+ T+L  +Y++  ++EAA ++F+    KSL+SWNAMI G+  +G  + 
Sbjct: 395 KRLKSA-TNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADA 453

Query: 396 AISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWV-HELVKSRNFESNIYVSTALI 454
           A  +F  M+   + P+ +T   +LSAC++ G + LG+ +   + +       +     +I
Sbjct: 454 AFDIFSRMRKIGIEPDDITFVGLLSACSRSGMLDLGRHIFRTMTQDYKITPKLEHYGCMI 513

Query: 455 DMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGV 514
           D+    G   EA E+ + M                                   + P GV
Sbjct: 514 DLLGHSGLFKEAEEMINNME----------------------------------MEPDGV 539

Query: 515 TFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLE-----KAL 569
            + S+L AC   G V  G+   Q++I      P    Y  + +I   AG+       +AL
Sbjct: 540 IWCSLLKACKIRGNVELGESFAQNLIKIEPENPGC--YVLLSNIYATAGRWNEVAKIRAL 597

Query: 570 EFIKGLAVEPG 580
              KG+   PG
Sbjct: 598 LNDKGMKKVPG 608


>gi|359484317|ref|XP_003633097.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
            [Vitis vinifera]
          Length = 1005

 Score =  477 bits (1227), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 262/758 (34%), Positives = 414/758 (54%), Gaps = 2/758 (0%)

Query: 27   QTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNE 86
            Q HA+ I  G  +DL   + L    +       A  +F  +PK +   +N ++ GF+   
Sbjct: 250  QVHAEAIKVGDFSDLFVGSALVDLYAKCGEMVLAERVFLCMPKQNAVSWNALLNGFAQMG 309

Query: 87   MPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVG 146
              +  +  +  +   + +    FT S VL   +   +   G ++H  AI  G   D F+ 
Sbjct: 310  DAEKVLNLFCRM-TGSEINFSKFTLSTVLKGCANSGNLRAGQIVHSLAIRIGCELDEFIS 368

Query: 147  AALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGT 206
              LVD+Y K      A KVF ++ + D V W+++I+ L +    +++  VF  M R+ G 
Sbjct: 369  CCLVDMYSKCGLAGDALKVFVRIEDPDVVSWSAIITCLDQKGQSREAAEVFKRM-RHSGV 427

Query: 207  WLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAEL 266
              +  ++A+++ A  ++ +L  G  I     K GF     V   LV+ Y K G V+    
Sbjct: 428  IPNQFTLASLVSAATDLGDLYYGESIHACVCKYGFEYDNTVCNALVTMYMKIGSVQDGCR 487

Query: 267  LFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGH 326
            +F      DLIS NA++SG+  N   ++ LR+F Q+LA     N  T + ++        
Sbjct: 488  VFEATTNRDLISWNALLSGFHDNETCDTGLRIFNQMLAEGFNPNMYTFISILRSCSSLSD 547

Query: 327  LHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAG 386
            + L   +H+  +K+ +  N  V TAL  +Y++   +E A  +F+   ++ L +W  ++AG
Sbjct: 548  VDLGKQVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAG 607

Query: 387  YTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESN 446
            Y Q+G  E+A+  F +MQ   V PN  T++S LS C+++  +  G+ +H +        +
Sbjct: 608  YAQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQLHSMAIKAGQSGD 667

Query: 447  IYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLH 506
            ++V++AL+DMYAKCG + +A  +FD +  +  V+WNT+I GY  HG G +AL+ F  ML 
Sbjct: 668  MFVASALVDMYAKCGCVEDAEVVFDGLVSRDTVSWNTIICGYSQHGQGGKALKAFEAMLD 727

Query: 507  SGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLE 566
             G  P  VTF+ VL ACSH GL+ EG + F S+   +G  P  EHYACMVDILGRAG+  
Sbjct: 728  EGTVPDEVTFIGVLSACSHMGLIEEGKKHFNSLSKIYGITPTIEHYACMVDILGRAGKFH 787

Query: 567  KALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYS 626
            +   FI+ + +     +W  +LGAC +H +      A+ KLFEL+PE    ++LLSN+++
Sbjct: 788  EVESFIEEMKLTSNVLIWETVLGACKMHGNIEFGERAAMKLFELEPEIDSNYILLSNMFA 847

Query: 627  AERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNG 686
            A+  +     VR ++  R + K PGC+ +EV G  HVF S D  HP+   I+  L+ L+ 
Sbjct: 848  AKGMWDDVTNVRALMSTRGVKKEPGCSWVEVNGQVHVFLSHDGSHPKIREIHLKLQDLHQ 907

Query: 687  KMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLD 746
            K+   G+   T   LH+V + EK+ ++  HSE+LA+AF L++T     IRI KNLR+C D
Sbjct: 908  KLMSVGYTPNTDHVLHNVSDREKQELLFYHSERLALAFALLSTSTRKTIRIFKNLRICGD 967

Query: 747  CHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
            CH   K IS++T + +VVRD N FHHFK G CSC ++W
Sbjct: 968  CHDFMKSISEITNQELVVRDINCFHHFKNGSCSCQNFW 1005



 Score =  253 bits (647), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 169/601 (28%), Positives = 287/601 (47%), Gaps = 10/601 (1%)

Query: 29  HAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNEMP 88
           H Q+I  G   D      L +  +   +  YA  +F  IP+ D+  +  +I GF      
Sbjct: 151 HGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIPERDVVSWTALITGFVAEGYG 210

Query: 89  KSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAA 148
             ++  +  +R+   +  + FTY+  L A S C D   G  +H  AI  G  SDLFVG+A
Sbjct: 211 SGAVNLFCEMRRE-GVEANEFTYATALKACSMCLDLEFGKQVHAEAIKVGDFSDLFVGSA 269

Query: 149 LVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWL 208
           LVDLY K   +  A +VF  MP+++ V WN++++G  +     D+  V     R  G+ +
Sbjct: 270 LVDLYAKCGEMVLAERVFLCMPKQNAVSWNALLNGFAQ---MGDAEKVLNLFCRMTGSEI 326

Query: 209 DST--SVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAEL 266
           + +  +++ VL   A    LR G  +  L +++G     ++   LV  YSKCG    A  
Sbjct: 327 NFSKFTLSTVLKGCANSGNLRAGQIVHSLAIRIGCELDEFISCCLVDMYSKCGLAGDALK 386

Query: 267 LFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGH 326
           +F  I  PD++S +A+I+     G++  +  +F+++  S    N  T+  L+      G 
Sbjct: 387 VFVRIEDPDVVSWSAIITCLDQKGQSREAAEVFKRMRHSGVIPNQFTLASLVSAATDLGD 446

Query: 327 LHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAG 386
           L+    IH+   K G   +++V  AL T+Y ++  ++   ++F+ ++ + L SWNA+++G
Sbjct: 447 LYYGESIHACVCKYGFEYDNTVCNALVTMYMKIGSVQDGCRVFEATTNRDLISWNALLSG 506

Query: 387 YTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESN 446
           +  N   +  + +F +M A    PN  T  SIL +C+ L  + LGK VH  +   + + N
Sbjct: 507 FHDNETCDTGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQVHAQIVKNSLDGN 566

Query: 447 IYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLH 506
            +V TAL+DMYAK   + +A  +F+ +  +    W  +++GY   G G +A++ F +M  
Sbjct: 567 DFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQDGQGEKAVKCFIQMQR 626

Query: 507 SGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLE 566
            G++P+  T  S L  CS    +  G ++  SM    G        + +VD+  + G +E
Sbjct: 627 EGVKPNEFTLASSLSGCSRIATLDSGRQL-HSMAIKAGQSGDMFVASALVDMYAKCGCVE 685

Query: 567 KALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYS 626
            A     GL V      W  ++     H     A  A E +  LD   V   V    + S
Sbjct: 686 DAEVVFDGL-VSRDTVSWNTIICGYSQHGQGGKALKAFEAM--LDEGTVPDEVTFIGVLS 742

Query: 627 A 627
           A
Sbjct: 743 A 743



 Score =  199 bits (506), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 121/432 (28%), Positives = 222/432 (51%), Gaps = 1/432 (0%)

Query: 111 YSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMP 170
           YS +L   ++  D + G  +HG  I SG   D  +  +LV++Y K      A KVF ++P
Sbjct: 131 YSGMLRTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIP 190

Query: 171 EKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGM 230
           E+D V W ++I+G +       ++ +F +M R G    +  + A  L A +   +L  G 
Sbjct: 191 ERDVVSWTALITGFVAEGYGSGAVNLFCEMRREG-VEANEFTYATALKACSMCLDLEFGK 249

Query: 231 EIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNG 290
           ++    +K+G    ++V + LV  Y+KCGE+  AE +F  + + + +S NA+++G+   G
Sbjct: 250 QVHAEAIKVGDFSDLFVGSALVDLYAKCGEMVLAERVFLCMPKQNAVSWNALLNGFAQMG 309

Query: 291 KTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLT 350
             E  L LF ++  S    +  T+  ++      G+L     +HS  ++ G   +  +  
Sbjct: 310 DAEKVLNLFCRMTGSEINFSKFTLSTVLKGCANSGNLRAGQIVHSLAIRIGCELDEFISC 369

Query: 351 ALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAP 410
            L  +YS+      A K+F    +  + SW+A+I    Q G + EA  +F+ M+ S V P
Sbjct: 370 CLVDMYSKCGLAGDALKVFVRIEDPDVVSWSAIITCLDQKGQSREAAEVFKRMRHSGVIP 429

Query: 411 NPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELF 470
           N  T++S++SA   LG +  G+ +H  V    FE +  V  AL+ MY K G++ +   +F
Sbjct: 430 NQFTLASLVSAATDLGDLYYGESIHACVCKYGFEYDNTVCNALVTMYMKIGSVQDGCRVF 489

Query: 471 DLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVR 530
           +  +++  ++WN ++SG+  +      L++F++ML  G  P+  TF+S+L +CS    V 
Sbjct: 490 EATTNRDLISWNALLSGFHDNETCDTGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVD 549

Query: 531 EGDEIFQSMIHD 542
            G ++   ++ +
Sbjct: 550 LGKQVHAQIVKN 561



 Score = 72.8 bits (177), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 50/174 (28%), Positives = 85/174 (48%), Gaps = 4/174 (2%)

Query: 416 SSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSH 475
           S +L  CA  G ++ GK +H  V       + ++  +L+++YAKCG+   A ++F  +  
Sbjct: 132 SGMLRTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIPE 191

Query: 476 KSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEI 535
           +  V+W  +I+G+   G+G  A+ LF EM   G+  +  T+ + L ACS    +  G ++
Sbjct: 192 RDVVSWTALITGFVAEGYGSGAVNLFCEMRREGVEANEFTYATALKACSMCLDLEFGKQV 251

Query: 536 FQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAV-WGALL 588
               I    F  L    A +VD+  + G++  A      L +    AV W ALL
Sbjct: 252 HAEAIKVGDFSDLFVGSA-LVDLYAKCGEMVLAERVF--LCMPKQNAVSWNALL 302


>gi|225462250|ref|XP_002263297.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
           [Vitis vinifera]
 gi|297736133|emb|CBI24171.3| unnamed protein product [Vitis vinifera]
          Length = 687

 Score =  476 bits (1226), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 252/671 (37%), Positives = 381/671 (56%), Gaps = 35/671 (5%)

Query: 149 LVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWL 208
            + +Y     ++ AR +FDK+P+ D   W  +IS L K+    ++I  + D         
Sbjct: 17  FIKVYSNSGDLQRARHLFDKIPQPDLPTWTILISALTKHGRSLEAIQYYNDFRHKNCVEP 76

Query: 209 DSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLF 268
           D   + +V  A A ++++     +    ++ GF   V +   L+  Y KC   E A L+F
Sbjct: 77  DKLLLLSVAKACASLRDVMNAKRVHEDAIRFGFCSDVLLGNALIDMYGKCRCSEGARLVF 136

Query: 269 RDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLH 328
             +   D+IS  +M S Y   G    +L  FR++  + ER NS T+  ++P       L 
Sbjct: 137 EGMPFRDVISWTSMASCYVNCGLLREALGAFRKMGLNGERPNSVTVSSILPACTDLKDLK 196

Query: 329 LTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESS--------------- 373
               +H F +++G+  N  V +AL  +Y+    +  A+ +FD  S               
Sbjct: 197 SGREVHGFVVRNGMGGNVFVSSALVNMYASCLSIRQAQLVFDSMSRRDTVSWNVLITAYF 256

Query: 374 -----EKSL---------------ASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPV 413
                EK L               ASWNA+I G  QNG TE+A+ +   MQ S   PN +
Sbjct: 257 LNKECEKGLSVFGRMMSEGVGLNYASWNAVIGGCMQNGRTEKALEVLSRMQNSGFKPNQI 316

Query: 414 TVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLM 473
           T++S+L AC  L ++  GK +H  +    F  ++  +TAL+ MYAKCG++  +R +F +M
Sbjct: 317 TITSVLPACTNLESLRGGKQIHGYIFRHWFFQDLTTTTALVFMYAKCGDLELSRRVFSMM 376

Query: 474 SHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGD 533
           + +  V+WNTMI    +HG+G EAL LF EM+ SG+RP+ VTF  VL  CSH+ LV EG 
Sbjct: 377 TKRDTVSWNTMIIATSMHGNGEEALLLFREMVDSGVRPNSVTFTGVLSGCSHSRLVDEGL 436

Query: 534 EIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMI 593
            IF SM  DH  +P A+H++CMVD+L RAG+LE+A EFIK + +EP    WGALLG C +
Sbjct: 437 LIFDSMSRDHSVEPDADHHSCMVDVLSRAGRLEEAYEFIKKMPIEPTAGAWGALLGGCRV 496

Query: 594 HKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCT 653
           +K+  L R+A+ +LFE++ +N G +VLLSNI  + + + +A+  R++++ R + K PGC+
Sbjct: 497 YKNVELGRIAANRLFEIESDNPGNYVLLSNILVSAKLWSEASETRKLMRDRGVTKNPGCS 556

Query: 654 LIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMM 713
            I+V    H F  GD+ + QS  IY  L+ +  KMR AG+   T   L DV++EEKE ++
Sbjct: 557 WIQVRNRVHTFVVGDKSNDQSDEIYRFLDYMGEKMRIAGYLPNTDFVLQDVDQEEKEEVL 616

Query: 714 KVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHF 773
             HSEKLA+AFG++     + IR+ KNLR+C DCH A KF++K+ G  I+VRD+ RFHHF
Sbjct: 617 CNHSEKLAVAFGVLNLNGESSIRVFKNLRICGDCHNAIKFMAKIVGVKIIVRDSLRFHHF 676

Query: 774 KGGVCSCGDYW 784
           + G+CSC D+W
Sbjct: 677 RDGLCSCQDFW 687



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 125/468 (26%), Positives = 223/468 (47%), Gaps = 44/468 (9%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           AR LF  IP+PDL  + ++I   + +     +I +Y   R    + PD      +LS A 
Sbjct: 30  ARHLFDKIPQPDLPTWTILISALTKHGRSLEAIQYYNDFRHKNCVEPDKL---LLLSVAK 86

Query: 120 ACC---DRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVL 176
           AC    D      +H  AI  G+ SD+ +G AL+D+Y K    + AR VF+ MP +D + 
Sbjct: 87  ACASLRDVMNAKRVHEDAIRFGFCSDVLLGNALIDMYGKCRCSEGARLVFEGMPFRDVIS 146

Query: 177 WNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLG 236
           W SM S  +     ++++  F  M  NG    +S +V+++LPA  ++++L+ G E+    
Sbjct: 147 WTSMASCYVNCGLLREALGAFRKMGLNGER-PNSVTVSSILPACTDLKDLKSGREVHGFV 205

Query: 237 LKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGY----TC---- 288
           ++ G   +V+V + LV+ Y+ C  + +A+L+F  + R D +S N +I+ Y     C    
Sbjct: 206 VRNGMGGNVFVSSALVNMYASCLSIRQAQLVFDSMSRRDTVSWNVLITAYFLNKECEKGL 265

Query: 289 ---------------------------NGKTESSLRLFRQLLASAERVNSSTIVGLIPVF 321
                                      NG+TE +L +  ++  S  + N  TI  ++P  
Sbjct: 266 SVFGRMMSEGVGLNYASWNAVIGGCMQNGRTEKALEVLSRMQNSGFKPNQITITSVLPAC 325

Query: 322 YPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWN 381
                L     IH +  +     + +  TAL  +Y++  ++E +R++F   +++   SWN
Sbjct: 326 TNLESLRGGKQIHGYIFRHWFFQDLTTTTALVFMYAKCGDLELSRRVFSMMTKRDTVSWN 385

Query: 382 AMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHE-LVKS 440
            MI   + +G  EEA+ LF+EM  S V PN VT + +LS C+    +  G  + + + + 
Sbjct: 386 TMIIATSMHGNGEEALLLFREMVDSGVRPNSVTFTGVLSGCSHSRLVDEGLLIFDSMSRD 445

Query: 441 RNFESNIYVSTALIDMYAKCGNIVEARELFDLMS-HKSEVTWNTMISG 487
            + E +    + ++D+ ++ G + EA E    M    +   W  ++ G
Sbjct: 446 HSVEPDADHHSCMVDVLSRAGRLEEAYEFIKKMPIEPTAGAWGALLGG 493



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 112/473 (23%), Positives = 195/473 (41%), Gaps = 84/473 (17%)

Query: 27  QTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNE 86
           + H   I  GF +D+     L       + +  AR +F  +P  D+  +  +   + N  
Sbjct: 99  RVHEDAIRFGFCSDVLLGNALIDMYGKCRCSEGARLVFEGMPFRDVISWTSMASCYVNCG 158

Query: 87  MPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVG 146
           + + ++  +  +  N    P++ T S +L A +   D   G  +HG  + +G G ++FV 
Sbjct: 159 LLREALGAFRKMGLNGE-RPNSVTVSSILPACTDLKDLKSGREVHGFVVRNGMGGNVFVS 217

Query: 147 AALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMV----- 201
           +ALV++Y     ++ A+ VFD M  +DTV WN +I+    N   +  + VFG M+     
Sbjct: 218 SALVNMYASCLSIRQAQLVFDSMSRRDTVSWNVLITAYFLNKECEKGLSVFGRMMSEGVG 277

Query: 202 -----------------------------RNGGTWLDSTSVAAVLPAVAEVQELRLGMEI 232
                                        +N G   +  ++ +VLPA   ++ LR G +I
Sbjct: 278 LNYASWNAVIGGCMQNGRTEKALEVLSRMQNSGFKPNQITITSVLPACTNLESLRGGKQI 337

Query: 233 QCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKT 292
                +  F   +   T LV  Y+KCG++E +  +F  + + D +S N MI   + +G  
Sbjct: 338 HGYIFRHWFFQDLTTTTALVFMYAKCGDLELSRRVFSMMTKRDTVSWNTMIIATSMHGNG 397

Query: 293 ESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTAL 352
           E +L LFR+++ S  R NS T  G+           L+ C HS  +  G++    +  ++
Sbjct: 398 EEALLLFREMVDSGVRPNSVTFTGV-----------LSGCSHSRLVDEGLL----IFDSM 442

Query: 353 STVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNP 412
           S                D S E      + M+   ++ G  EEA    ++M    + P  
Sbjct: 443 SR---------------DHSVEPDADHHSCMVDVLSRAGRLEEAYEFIKKM---PIEPTA 484

Query: 413 VTVSSILSACAQLGAISLGKWVHELVKSRNFE------------SNIYVSTAL 453
               ++L  C     + LG+    +  +R FE            SNI VS  L
Sbjct: 485 GAWGALLGGCRVYKNVELGR----IAANRLFEIESDNPGNYVLLSNILVSAKL 533



 Score = 53.1 bits (126), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 34/129 (26%), Positives = 58/129 (44%), Gaps = 2/129 (1%)

Query: 448 YVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHS 507
           +++   I +Y+  G++  AR LFD +      TW  +IS    HG  LEA+Q +++  H 
Sbjct: 12  HLALKFIKVYSNSGDLQRARHLFDKIPQPDLPTWTILISALTKHGRSLEAIQYYNDFRHK 71

Query: 508 G-IRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLE 566
             + P  +  LSV  AC+    V     + +  I   GF         ++D+ G+    E
Sbjct: 72  NCVEPDKLLLLSVAKACASLRDVMNAKRVHEDAIR-FGFCSDVLLGNALIDMYGKCRCSE 130

Query: 567 KALEFIKGL 575
            A    +G+
Sbjct: 131 GARLVFEGM 139


>gi|225444329|ref|XP_002264248.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11290
           [Vitis vinifera]
          Length = 767

 Score =  476 bits (1226), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 282/761 (37%), Positives = 429/761 (56%), Gaps = 47/761 (6%)

Query: 66  SIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRS 125
           SI   D F +N +I   +  + P++++ F+T ++ + A+  +NFT+  +L A +A   R 
Sbjct: 12  SISHKDTFHWNSLI-AKNATQNPQTALTFFTRMQAH-AVPSNNFTFPALLKACAAL--RR 67

Query: 126 IGVLLHGHAIVS--GYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEK--DTVLWNSMI 181
           +   L  HA ++  G  +D F  AALVD Y K      A +VFD+MPE   D V W ++I
Sbjct: 68  LLPTLQVHAYLTRLGLAADRFSAAALVDAYGKCGHAYYAAQVFDEMPEGSVDVVSWTALI 127

Query: 182 SGLMKNCCFQDSIWVFGDMVRNGGTW-------LDSTSVAAVLPAVA---EVQELRLGME 231
           S    N C  ++   FG M    G W       +D  S+ A++ A A       LR G  
Sbjct: 128 SAYSSNGCVDEAFKAFGRMRWMRG-WDGSECCGVDVVSLGALVSACAVGCGSNCLRRGSA 186

Query: 232 IQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIV--RPDLISCNAMISGYTCN 289
           +  L +K GF    ++   +V  YS C +V  A  +F  I   + D++S N++ISG+T N
Sbjct: 187 VHGLVVKYGFGVSTHLGNSMVHMYSACKDVGGAWRVFNGIPIEQRDVVSWNSLISGFTLN 246

Query: 290 GKTESSLRLFRQLLA---SAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSG----I 342
           G+ E +LR F  +++   SA   N  T++ L+      G +  ++ +H +         +
Sbjct: 247 GEAERALRTFEDMVSEGTSAVEPNRVTVIALLKSCAELGCVETSSWVHEYISSRHSSLLV 306

Query: 343 VSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQE 402
             +  VLTAL  +++R   +  AR++FD    K++  W+AMIAGY Q    EEA+ LF++
Sbjct: 307 AKDVVVLTALLDMHARCGNLALAREIFDGVEGKNVVCWSAMIAGYEQGSCPEEALRLFRQ 366

Query: 403 MQAS------KVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDM 456
           M         +V PN VT+ S+++AC++LGA      +H+   +   + +  +++ALIDM
Sbjct: 367 MLMEGNMVGVEVKPNAVTLVSVIAACSRLGASRSASMIHKYAVATGLDQDARIASALIDM 426

Query: 457 YAKCGNIVEARELFDLM--SHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGV 514
            AKCG+I   R++F  M  S ++ V+W++MI   G+HG G  AL+LFSEM   G  P+ +
Sbjct: 427 CAKCGDIEHGRQVFSEMDESTRTVVSWSSMIGAEGIHGEGKRALELFSEMRTGGYEPNEI 486

Query: 515 TFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKG 574
           T++SVL ACSHAGLV +G   F SM  D+G  P  +HYAC+VD+LGRAG L++A   I  
Sbjct: 487 TYISVLSACSHAGLVEQGKSCFNSMEKDYGMSPTGKHYACLVDLLGRAGHLDEAHNVILN 546

Query: 575 LAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQA 634
           + ++   A+WG+LL AC +H +  L  +  +K+  LD  +VG+HVLL+N+Y     +   
Sbjct: 547 MPIKADLALWGSLLAACHLHGNCKLGEIVEKKILSLDSNSVGHHVLLANMYEDAGRWDDV 606

Query: 635 ATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAG-F 693
             +R  +++  L K PG + IE+G   + F + D+ HP+S  IY  L+ L+ ++R+A  +
Sbjct: 607 VRMRVELRRSGLRKIPGQSFIEIGNEVYSFMAEDRSHPESEMIYKELDGLDERVRKAAKY 666

Query: 694 QTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATE----------PGTEIRIIKNLRV 743
            TET   + D +     L  K HSE+LAIAFGLI  +            T IRI KNLRV
Sbjct: 667 VTETGLNVEDGDIAGLILRCKYHSERLAIAFGLIMIDRHSTCSCSLRTATPIRITKNLRV 726

Query: 744 CLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           C DCH  TK +SKV  R ++VRDA+RFHHF+ G CSCGDYW
Sbjct: 727 CRDCHAYTKLVSKVIDRELIVRDAHRFHHFRDGFCSCGDYW 767



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 135/475 (28%), Positives = 231/475 (48%), Gaps = 43/475 (9%)

Query: 160 KSARKVFDKMPEKDTVLWNSMISGLMKNCCF--QDSIWVFGDMVRNGGTWLDSTSVAAVL 217
           K+ R     +  KDT  WNS+I+   KN     Q ++  F  M +      ++ +  A+L
Sbjct: 4   KTRRWYHCSISHKDTFHWNSLIA---KNATQNPQTALTFFTRM-QAHAVPSNNFTFPALL 59

Query: 218 PAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRP--D 275
            A A ++ L   +++     +LG     +    LV  Y KCG    A  +F ++     D
Sbjct: 60  KACAALRRLLPTLQVHAYLTRLGLAADRFSAAALVDAYGKCGHAYYAAQVFDEMPEGSVD 119

Query: 276 LISCNAMISGYTCNGKTESSLRLFRQL----------LASAERVNSSTIVGLIPVFYPFG 325
           ++S  A+IS Y+ NG  + + + F ++              + V+   +V    V     
Sbjct: 120 VVSWTALISAYSSNGCVDEAFKAFGRMRWMRGWDGSECCGVDVVSLGALVSACAVGCGSN 179

Query: 326 HLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFD--ESSEKSLASWNAM 383
            L   + +H   +K G   ++ +  ++  +YS   ++  A ++F+     ++ + SWN++
Sbjct: 180 CLRRGSAVHGLVVKYGFGVSTHLGNSMVHMYSACKDVGGAWRVFNGIPIEQRDVVSWNSL 239

Query: 384 IAGYTQNGLTEEAISLFQEMQA---SKVAPNPVTVSSILSACAQLGAISLGKWVHELVKS 440
           I+G+T NG  E A+  F++M +   S V PN VTV ++L +CA+LG +    WVHE + S
Sbjct: 240 ISGFTLNGEAERALRTFEDMVSEGTSAVEPNRVTVIALLKSCAELGCVETSSWVHEYISS 299

Query: 441 RN----FESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLE 496
           R+       ++ V TAL+DM+A+CGN+  ARE+FD +  K+ V W+ MI+GY       E
Sbjct: 300 RHSSLLVAKDVVVLTALLDMHARCGNLALAREIFDGVEGKNVVCWSAMIAGYEQGSCPEE 359

Query: 497 ALQLFSEMLHSG------IRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDH----GFK 546
           AL+LF +ML  G      ++P+ VT +SV+ ACS  G  R       SMIH +    G  
Sbjct: 360 ALRLFRQMLMEGNMVGVEVKPNAVTLVSVIAACSRLGASRSA-----SMIHKYAVATGLD 414

Query: 547 PLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAV-WGALLGACMIHKDTNLA 600
             A   + ++D+  + G +E   +    +       V W +++GA  IH +   A
Sbjct: 415 QDARIASALIDMCAKCGDIEHGRQVFSEMDESTRTVVSWSSMIGAEGIHGEGKRA 469


>gi|302770521|ref|XP_002968679.1| hypothetical protein SELMODRAFT_90123 [Selaginella moellendorffii]
 gi|300163184|gb|EFJ29795.1| hypothetical protein SELMODRAFT_90123 [Selaginella moellendorffii]
          Length = 818

 Score =  476 bits (1225), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 271/795 (34%), Positives = 416/795 (52%), Gaps = 45/795 (5%)

Query: 29  HAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIP--KPDLFLFNVIIRGFSNNE 86
           H +I    F+ D      L        +   AR++F S+   + ++  +N +I  ++ N 
Sbjct: 30  HERIRCSRFERDTMVGNALISMYGKCDSLVDARSVFESMDWRQRNVVSWNAMIAAYAQNG 89

Query: 87  MPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVG 146
               ++  Y  +     L  D+ T+  VL A   C   + G  +H     SG  S   + 
Sbjct: 90  HSTEALVLYWRMNLQ-GLGTDHVTFVSVLGA---CSSLAQGREIHNRVFYSGLDSFQSLA 145

Query: 147 AALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGT 206
            ALV +Y +F  V  A+++F  +  +D   WN++I    ++  +  ++ +F +M      
Sbjct: 146 NALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVILAHSQSGDWSGALRIFKEM--KCDV 203

Query: 207 WLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAEL 266
             +ST+   V+   +  + L  G +I    +  GF   + V T L++ Y KCG    A  
Sbjct: 204 KPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGFDTDLVVATALINMYGKCGSSHEARE 263

Query: 267 LFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGH 326
           +F  + + D++S N MI  Y  NG    +L L+++L     +   +T V ++        
Sbjct: 264 VFDKMKKRDMVSWNVMIGCYVLNGDFHEALELYQKLDMEGFKRTKATFVSILGACSSVKA 323

Query: 327 LHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEME----------------------- 363
           L     +HS  L+ G+ S  +V TAL  +Y++   +E                       
Sbjct: 324 LAQGRLVHSHILERGLDSEVAVATALVNMYAKCGSLEEARKVFNAMKNRDAVAWSTLIGA 383

Query: 364 -----------AARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQ-ASKVAPN 411
                       ARK+FD    +   SWNAMI  Y QNG    A+ +F+EM  A+ + P+
Sbjct: 384 YASNGYGKDARKARKVFDRLGSRDTISWNAMITTYVQNGCAVAAMKIFREMTGAAGLKPD 443

Query: 412 PVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFD 471
            VT  ++L ACA LG +S  K +H  +     ESN+ V+  LI+MYA+CG++ EA  LF 
Sbjct: 444 AVTFIAVLEACASLGRLSEVKALHAQISESELESNVVVTNTLINMYARCGSLEEAERLFA 503

Query: 472 LMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVRE 531
               K+ V+W  M++ +  +G   EAL LF EM   G++P  VT+ S+L+ C+H G + +
Sbjct: 504 AAKEKTVVSWTAMVAAFSQYGRYAEALDLFQEMDLEGVKPDDVTYTSILFVCTHGGSLEQ 563

Query: 532 GDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGAC 591
           G   F  M   H   P A+H+A MVD+LGR+G+L  A E ++ +  EP P  W   L AC
Sbjct: 564 GWRYFTDMAELHALAPTADHFAAMVDLLGRSGRLFDAKELLESMPFEPDPVAWMTFLTAC 623

Query: 592 MIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPG 651
            IH    L   A+E+++ELDP +   ++ +SNIY+A   + + A+VR+ +++R L K PG
Sbjct: 624 RIHGKLELGEAAAERVYELDPSSTAPYIAMSNIYAAHGMWEKVASVRKKMEERGLKKLPG 683

Query: 652 CTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKEL 711
            + IEV G  H F+SG + HP++  I   L +L+G MR AG+  +T   LHDV E EKE 
Sbjct: 684 LSFIEVDGKLHEFSSGGKYHPRTDEICEELTRLHGLMRAAGYVPDTKAVLHDVSEGEKET 743

Query: 712 MMKVHSEKLAIAFGLIATE-PGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRF 770
           M+  HSEK+AIAFGL+++   G  IR++KNLRVC DCHTATKFI+++ GR I+VRD NRF
Sbjct: 744 MLLYHSEKMAIAFGLVSSRGSGEPIRVVKNLRVCSDCHTATKFIARIAGRDIIVRDCNRF 803

Query: 771 HHFKG-GVCSCGDYW 784
           H F   G CSCGDYW
Sbjct: 804 HRFSSDGKCSCGDYW 818



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 150/523 (28%), Positives = 257/523 (49%), Gaps = 46/523 (8%)

Query: 106 PDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKV 165
           PDN T+  VL + S+C D   G  LH     S +  D  VG AL+ +Y K   +  AR V
Sbjct: 5   PDNVTFLTVLCSCSSCGDVVEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARSV 64

Query: 166 FDKMP--EKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNG-GTWLDSTSVAAVLPAVAE 222
           F+ M   +++ V WN+MI+   +N    +++ ++  M   G GT  D  +  +VL A + 
Sbjct: 65  FESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGT--DHVTFVSVLGACSS 122

Query: 223 VQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAM 282
           + +   G EI       G      +   LV+ Y++ G V  A+ +F+ +   D  S NA+
Sbjct: 123 LAQ---GREIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAV 179

Query: 283 ISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGI 342
           I  ++ +G    +LR+F+++     + NS+T + +I  F     L     IH+  + +G 
Sbjct: 180 ILAHSQSGDWSGALRIFKEMKCDV-KPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGF 238

Query: 343 VSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQE 402
            ++  V TAL  +Y +      AR++FD+  ++ + SWN MI  Y  NG   EA+ L+Q+
Sbjct: 239 DTDLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVLNGDFHEALELYQK 298

Query: 403 MQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGN 462
           +          T  SIL AC+ + A++ G+ VH  +  R  +S + V+TAL++MYAKCG+
Sbjct: 299 LDMEGFKRTKATFVSILGACSSVKALAQGRLVHSHILERGLDSEVAVATALVNMYAKCGS 358

Query: 463 IVEARELFDLMSHKSEVTWNTMISGYGLHGHG---------------------------- 494
           + EAR++F+ M ++  V W+T+I  Y  +G+G                            
Sbjct: 359 LEEARKVFNAMKNRDAVAWSTLIGAYASNGYGKDARKARKVFDRLGSRDTISWNAMITTY 418

Query: 495 ------LEALQLFSEML-HSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKP 547
                 + A+++F EM   +G++P  VTF++VL AC+  G + E  +   + I +   + 
Sbjct: 419 VQNGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEACASLGRLSEV-KALHAQISESELES 477

Query: 548 LAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGA 590
                  ++++  R G LE+A E +   A E     W A++ A
Sbjct: 478 NVVVTNTLINMYARCGSLEEA-ERLFAAAKEKTVVSWTAMVAA 519



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 121/509 (23%), Positives = 214/509 (42%), Gaps = 85/509 (16%)

Query: 12  FLSLLKGAKTQSQLTQ---THAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIP 68
           +++++ G  T   L +    HA+I+ +GF  DL   T L +      ++  AR +F  + 
Sbjct: 210 YINVISGFSTPEVLPEGRKIHAEIVANGFDTDLVVATALINMYGKCGSSHEAREVFDKMK 269

Query: 69  KPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGV 128
           K D+  +NV+I  +  N     ++  Y  L           T+  +L A S+    + G 
Sbjct: 270 KRDMVSWNVMIGCYVLNGDFHEALELYQKLDME-GFKRTKATFVSILGACSSVKALAQGR 328

Query: 129 LLHGHAIVSGYGSDLFVGAALVDLYFK-------------------FSW----------- 158
           L+H H +  G  S++ V  ALV++Y K                    +W           
Sbjct: 329 LVHSHILERGLDSEVAVATALVNMYAKCGSLEEARKVFNAMKNRDAVAWSTLIGAYASNG 388

Query: 159 ----VKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVA 214
                + ARKVFD++  +DT+ WN+MI+  ++N C   ++ +F +M    G   D+ +  
Sbjct: 389 YGKDARKARKVFDRLGSRDTISWNAMITTYVQNGCAVAAMKIFREMTGAAGLKPDAVTFI 448

Query: 215 AVLPAVAEVQELRLGMEIQCLGLKLG---FHDHVYVLTGLVSFYSKCGEVERAELLFRDI 271
           AVL A A +  L    E++ L  ++       +V V   L++ Y++CG +E AE LF   
Sbjct: 449 AVLEACASLGRLS---EVKALHAQISESELESNVVVTNTLINMYARCGSLEEAERLFAAA 505

Query: 272 VRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTN 331
               ++S  AM++ ++  G+   +L LF+++     + +  T   ++ V           
Sbjct: 506 KEKTVVSWTAMVAAFSQYGRYAEALDLFQEMDLEGVKPDDVTYTSILFV----------- 554

Query: 332 CIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNG 391
           C H   L+ G              ++ + E+ A     D         + AM+    ++G
Sbjct: 555 CTHGGSLEQGW-----------RYFTDMAELHALAPTADH--------FAAMVDLLGRSG 595

Query: 392 LTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLG----KWVHELVKSRNFE--- 444
              +A  L + M      P+PV   + L+AC   G + LG    + V+EL  S       
Sbjct: 596 RLFDAKELLESM---PFEPDPVAWMTFLTACRIHGKLELGEAAAERVYELDPSSTAPYIA 652

Query: 445 -SNIYVSTALIDMYAKCGNIVEARELFDL 472
            SNIY +  + +  A     +E R L  L
Sbjct: 653 MSNIYAAHGMWEKVASVRKKMEERGLKKL 681


>gi|302800114|ref|XP_002981815.1| hypothetical protein SELMODRAFT_114918 [Selaginella moellendorffii]
 gi|300150647|gb|EFJ17297.1| hypothetical protein SELMODRAFT_114918 [Selaginella moellendorffii]
          Length = 637

 Score =  476 bits (1224), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 252/638 (39%), Positives = 367/638 (57%), Gaps = 3/638 (0%)

Query: 149 LVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWL 208
           ++  Y +   + + RK FD+MP  D V WN++I+  + N  F D  W+F   +   G   
Sbjct: 1   MLSAYSQIGNIPAVRKAFDEMPVADIVSWNALIAAYIGNRDF-DRCWLFFRGMLLQGINP 59

Query: 209 DSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLF 268
               ++  L A  + +E+ +G  IQ   L  G  +   V T LVS Y K G    A  +F
Sbjct: 60  GEVGISIFLSACTDAREITIGRSIQLAILGTGIEEESIVQTALVSMYGKLGHCTDAASVF 119

Query: 269 RDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLH 328
             +   D+++ +AM++ Y  NG    +L LFRQ+       N  T+V  +      G L 
Sbjct: 120 LRMSHRDVVAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVSGLDACASLGDLR 179

Query: 329 LTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYT 388
               +H      GI S   V TAL  +Y +   +EAA + F +  EK++ +W+A+ A Y 
Sbjct: 180 SGALMHQRVEAQGIQSGVVVGTALVNLYGKCGRIEAAVEAFGQIVEKNVVAWSAISAAYA 239

Query: 389 QNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHEL--VKSRNFESN 446
           +N    +AI +   M    + PN  T  S+L ACA + A+  G+ +HE   V     ES+
Sbjct: 240 RNDRNRDAIRVLHRMDLEGLVPNSTTFVSVLDACAAIAALKQGRRIHERTQVLGGGLESD 299

Query: 447 IYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLH 506
           +YV TAL++MY+KCGN+  A ++FD ++H   V WN++I+    HG   +AL+LF  M  
Sbjct: 300 VYVLTALVNMYSKCGNLALAGDMFDKIAHLDLVLWNSLIATNAQHGQTEKALELFERMRL 359

Query: 507 SGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLE 566
            G++P+ +TF SVL+ACSHAG++ +G + F S I DHG  P AEH+ CMVD+LGRAG + 
Sbjct: 360 EGLQPTIITFTSVLFACSHAGMLDQGRKHFVSFIGDHGIFPEAEHFGCMVDLLGRAGWIV 419

Query: 567 KALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYS 626
            + + +  +  EP P  W A LGAC  +++ + A  A+E LF+LDP     +VLLSN+Y+
Sbjct: 420 DSEDLLLHMPFEPHPVAWMAFLGACRTYRNMDRAIWAAENLFQLDPRKRAPYVLLSNMYA 479

Query: 627 AERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNG 686
               +   A +RQ ++     K  G + IEV    H F SGD  HP+   I+A L++L  
Sbjct: 480 KAGRWSDVARMRQAMQLFMTVKEAGRSWIEVKDRVHEFISGDLDHPRIGEIHAELQRLTK 539

Query: 687 KMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLD 746
            M+EAG+  +T   LHDV++E KE+M+  HSEKLA+AF L+ T  G+ IR++KNLRVC D
Sbjct: 540 LMKEAGYVPDTEMVLHDVKQEVKEIMVGYHSEKLAMAFALLTTPEGSPIRVVKNLRVCND 599

Query: 747 CHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           CHTA+KFISK+  R IVVRD NRFH F+ G CSCGDYW
Sbjct: 600 CHTASKFISKLVNREIVVRDCNRFHRFQNGACSCGDYW 637



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 107/414 (25%), Positives = 193/414 (46%), Gaps = 7/414 (1%)

Query: 61  RALFFSIPKPDLFLFNVIIRGF-SNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           R  F  +P  D+  +N +I  +  N +  +  + F   L +   + P     S  LSA +
Sbjct: 15  RKAFDEMPVADIVSWNALIAAYIGNRDFDRCWLFFRGMLLQ--GINPGEVGISIFLSACT 72

Query: 120 ACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNS 179
              + +IG  +    + +G   +  V  ALV +Y K      A  VF +M  +D V W++
Sbjct: 73  DAREITIGRSIQLAILGTGIEEESIVQTALVSMYGKLGHCTDAASVFLRMSHRDVVAWSA 132

Query: 180 MISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKL 239
           M++   +N   ++++ +F  M  + G   +  ++ + L A A + +LR G  +       
Sbjct: 133 MVAAYARNGHPREALGLFRQMDLD-GVAPNKVTLVSGLDACASLGDLRSGALMHQRVEAQ 191

Query: 240 GFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLF 299
           G    V V T LV+ Y KCG +E A   F  IV  ++++ +A+ + Y  N +   ++R+ 
Sbjct: 192 GIQSGVVVGTALVNLYGKCGRIEAAVEAFGQIVEKNVVAWSAISAAYARNDRNRDAIRVL 251

Query: 300 RQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIH--SFCLKSGIVSNSSVLTALSTVYS 357
            ++       NS+T V ++        L     IH  +  L  G+ S+  VLTAL  +YS
Sbjct: 252 HRMDLEGLVPNSTTFVSVLDACAAIAALKQGRRIHERTQVLGGGLESDVYVLTALVNMYS 311

Query: 358 RLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSS 417
           +   +  A  +FD+ +   L  WN++IA   Q+G TE+A+ LF+ M+   + P  +T +S
Sbjct: 312 KCGNLALAGDMFDKIAHLDLVLWNSLIATNAQHGQTEKALELFERMRLEGLQPTIITFTS 371

Query: 418 ILSACAQLGAISLG-KWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELF 470
           +L AC+  G +  G K     +              ++D+  + G IV++ +L 
Sbjct: 372 VLFACSHAGMLDQGRKHFVSFIGDHGIFPEAEHFGCMVDLLGRAGWIVDSEDLL 425



 Score =  110 bits (276), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 90/336 (26%), Positives = 154/336 (45%), Gaps = 19/336 (5%)

Query: 10  NLFLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPK 69
           ++FLS    A+  +        I+  G + +    T L            A ++F  +  
Sbjct: 65  SIFLSACTDAREITIGRSIQLAILGTGIEEESIVQTALVSMYGKLGHCTDAASVFLRMSH 124

Query: 70  PDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVL 129
            D+  ++ ++  ++ N  P+ ++  +  +  +  + P+  T    L A ++  D   G L
Sbjct: 125 RDVVAWSAMVAAYARNGHPREALGLFRQMDLD-GVAPNKVTLVSGLDACASLGDLRSGAL 183

Query: 130 LHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCC 189
           +H      G  S + VG ALV+LY K   +++A + F ++ EK+ V W+++ +   +N  
Sbjct: 184 MHQRVEAQGIQSGVVVGTALVNLYGKCGRIEAAVEAFGQIVEKNVVAWSAISAAYARNDR 243

Query: 190 FQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEI----QCLGLKLGFHDHV 245
            +D+I V   M   G    +ST+  +VL A A +  L+ G  I    Q LG   G    V
Sbjct: 244 NRDAIRVLHRMDLEGLV-PNSTTFVSVLDACAAIAALKQGRRIHERTQVLG--GGLESDV 300

Query: 246 YVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLAS 305
           YVLT LV+ YSKCG +  A  +F  I   DL+  N++I+    +G+TE +L LF ++   
Sbjct: 301 YVLTALVNMYSKCGNLALAGDMFDKIAHLDLVLWNSLIATNAQHGQTEKALELFERM--- 357

Query: 306 AERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSG 341
                   + GL P    F  + L  C H+  L  G
Sbjct: 358 -------RLEGLQPTIITFTSV-LFACSHAGMLDQG 385


>gi|449459160|ref|XP_004147314.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930-like [Cucumis sativus]
          Length = 695

 Score =  475 bits (1223), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 250/644 (38%), Positives = 372/644 (57%), Gaps = 37/644 (5%)

Query: 142 DLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMV 201
           D+F   AL+  Y K   +++ +  FD+MP +D+V +N+ I+G   N C Q+S+ +F  M 
Sbjct: 88  DIFSWNALLSAYAKSGSIQNLKATFDRMPFRDSVSYNTTIAGFSGNSCPQESLELFKRMQ 147

Query: 202 RNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEV 261
           R G    + T + ++L A A++ +LR G +I    +   F  +V++   L   Y+KCGE+
Sbjct: 148 REGFEPTEYT-IVSILNASAQLSDLRYGKQIHGSIIVRNFLGNVFIWNALTDMYAKCGEI 206

Query: 262 ERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVF 321
           E+A  LF  + + +L+S N MISGY  NG+ E  + L  Q+  S                
Sbjct: 207 EQARWLFDCLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQMRLS---------------- 250

Query: 322 YPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWN 381
              GH+               V+ S+++ A    Y +   ++ AR++F E  EK +  W 
Sbjct: 251 ---GHM------------PDQVTMSTIIAA----YCQCGRVDEARRVFSEFKEKDIVCWT 291

Query: 382 AMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSR 441
           AM+ GY +NG  E+A+ LF EM    + P+  T+SS++S+CA+L ++  G+ VH      
Sbjct: 292 AMMVGYAKNGREEDALLLFNEMLLEHIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSILA 351

Query: 442 NFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLF 501
              +N+ VS+ALIDMY+KCG I +AR +F+LM  ++ V+WN MI G   +GH  +AL+LF
Sbjct: 352 GLNNNLLVSSALIDMYSKCGFIDDARSVFNLMPTRNVVSWNAMIVGCAQNGHDKDALELF 411

Query: 502 SEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGR 561
             ML    +P  VTF+ +L AC H   + +G E F S+ + HG  P  +HYACMV++LGR
Sbjct: 412 ENMLQQKFKPDNVTFIGILSACLHCNWIEQGQEYFDSITNQHGMTPTLDHYACMVNLLGR 471

Query: 562 AGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLL 621
            G++E+A+  IK +A +P   +W  LL  C    D   A VA+  LFELDP     +++L
Sbjct: 472 TGRIEQAVALIKNMAHDPDFLIWSTLLSICSTKGDIVNAEVAARHLFELDPTIAVPYIML 531

Query: 622 SNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAML 681
           SN+Y++   +   A+VR ++K + + K  G + IE+    H FTS D+ HP+S  IY  L
Sbjct: 532 SNMYASMGRWKDVASVRNLMKSKNVKKFAGFSWIEIDNEVHRFTSEDRTHPESEDIYEKL 591

Query: 682 EKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPG-TEIRIIKN 740
             L GK++E GF   T   LHDV E+EK   +  HSEKLA+AFGLI    G + IRIIKN
Sbjct: 592 NMLIGKLQEEGFTPNTNLVLHDVGEDEKFKSICFHSEKLALAFGLIKKPNGISPIRIIKN 651

Query: 741 LRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           +R+C DCH   KF S++ GR I++RD+NRFHHF  G CSC D W
Sbjct: 652 IRICNDCHEFMKFASRIIGRQIILRDSNRFHHFSTGKCSCNDNW 695



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 117/434 (26%), Positives = 202/434 (46%), Gaps = 51/434 (11%)

Query: 61  RALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASA 120
           +A F  +P  D   +N  I GFS N  P+ S+  +  +++     P  +T   +L+A++ 
Sbjct: 109 KATFDRMPFRDSVSYNTTIAGFSGNSCPQESLELFKRMQRE-GFEPTEYTIVSILNASAQ 167

Query: 121 CCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSM 180
             D   G  +HG  IV  +  ++F+  AL D+Y K   ++ AR +FD + +K+ V WN M
Sbjct: 168 LSDLRYGKQIHGSIIVRNFLGNVFIWNALTDMYAKCGEIEQARWLFDCLTKKNLVSWNLM 227

Query: 181 ISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGL--- 237
           ISG  KN                                         G   +C+GL   
Sbjct: 228 ISGYAKN-----------------------------------------GQPEKCIGLLHQ 246

Query: 238 -KLGFH--DHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTES 294
            +L  H  D V  ++ +++ Y +CG V+ A  +F +    D++   AM+ GY  NG+ E 
Sbjct: 247 MRLSGHMPDQV-TMSTIIAAYCQCGRVDEARRVFSEFKEKDIVCWTAMMVGYAKNGREED 305

Query: 295 SLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALST 354
           +L LF ++L      +S T+  ++        LH    +H   + +G+ +N  V +AL  
Sbjct: 306 ALLLFNEMLLEHIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSILAGLNNNLLVSSALID 365

Query: 355 VYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVT 414
           +YS+   ++ AR +F+    +++ SWNAMI G  QNG  ++A+ LF+ M   K  P+ VT
Sbjct: 366 MYSKCGFIDDARSVFNLMPTRNVVSWNAMIVGCAQNGHDKDALELFENMLQQKFKPDNVT 425

Query: 415 VSSILSACAQLGAISLGK-WVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLM 473
              ILSAC     I  G+ +   +         +     ++++  + G I +A  L   M
Sbjct: 426 FIGILSACLHCNWIEQGQEYFDSITNQHGMTPTLDHYACMVNLLGRTGRIEQAVALIKNM 485

Query: 474 SHKSE-VTWNTMIS 486
           +H  + + W+T++S
Sbjct: 486 AHDPDFLIWSTLLS 499



 Score = 85.9 bits (211), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 54/227 (23%), Positives = 115/227 (50%), Gaps = 4/227 (1%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           AR +F    + D+  +  ++ G++ N   + ++  +  +     + PD++T S V+S+ +
Sbjct: 275 ARRVFSEFKEKDIVCWTAMMVGYAKNGREEDALLLFNEMLLE-HIEPDSYTLSSVVSSCA 333

Query: 120 ACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNS 179
                  G  +HG +I++G  ++L V +AL+D+Y K  ++  AR VF+ MP ++ V WN+
Sbjct: 334 KLASLHHGQAVHGKSILAGLNNNLLVSSALIDMYSKCGFIDDARSVFNLMPTRNVVSWNA 393

Query: 180 MISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGME-IQCLGLK 238
           MI G  +N   +D++ +F +M++      D+ +   +L A      +  G E    +  +
Sbjct: 394 MIVGCAQNGHDKDALELFENMLQQKFK-PDNVTFIGILSACLHCNWIEQGQEYFDSITNQ 452

Query: 239 LGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVR-PDLISCNAMIS 284
            G    +     +V+   + G +E+A  L +++   PD +  + ++S
Sbjct: 453 HGMTPTLDHYACMVNLLGRTGRIEQAVALIKNMAHDPDFLIWSTLLS 499


>gi|302816499|ref|XP_002989928.1| hypothetical protein SELMODRAFT_130658 [Selaginella moellendorffii]
 gi|300142239|gb|EFJ08941.1| hypothetical protein SELMODRAFT_130658 [Selaginella moellendorffii]
          Length = 818

 Score =  475 bits (1223), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 270/795 (33%), Positives = 417/795 (52%), Gaps = 45/795 (5%)

Query: 29  HAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIP--KPDLFLFNVIIRGFSNNE 86
           H +I    F+ D      L        +   AR++F S+   + ++  +N +I  ++ N 
Sbjct: 30  HERIRCSRFERDTMVGNALISMYGKCDSLVDARSVFESMDWRQRNVVSWNAMIAAYAQNG 89

Query: 87  MPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVG 146
               ++  Y  +     L  D+ T+  VL A   C   + G  +H     SG  S   + 
Sbjct: 90  HSTEALVLYWRMNLQ-GLGTDHVTFVSVLGA---CSSLAQGREIHNRVFYSGLDSFQSLA 145

Query: 147 AALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGT 206
            ALV +Y +F  V  A+++F  +  +D   WN++I    ++  +  ++ +F +M  +   
Sbjct: 146 NALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVILAHSQSGDWSGALRIFKEMKCDMKP 205

Query: 207 WLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAEL 266
             +ST+   V+   +  + L  G +I    +  GF   + V T L++ Y KCG    A  
Sbjct: 206 --NSTTYINVISGFSTPEVLPEGRKIHAEIVANGFDSDLVVATALINMYGKCGSSHEARE 263

Query: 267 LFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGH 326
           +F  + + D++S N MI  Y  NG    +L L+++L     +   +T V ++        
Sbjct: 264 VFDKMKKRDMVSWNVMIGCYVQNGDFHEALELYQKLDMEGFKRTKATFVSILGACSSVKA 323

Query: 327 LHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEME----------------------- 363
           L     +HS  L+ G+ S  +V TAL  +Y++   +E                       
Sbjct: 324 LAQGRLVHSHILERGLDSEVAVATALVNMYAKCGSLEEARKVFNAMKNRDAVAWSTLIGA 383

Query: 364 -----------AARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQ-ASKVAPN 411
                       ARK+FD    +    WNAMI  Y QNG    A+ +F+EM  A+ + P+
Sbjct: 384 YASNGYGKDARKARKVFDRLGSRDTICWNAMITTYVQNGCAVAAMKIFREMTGAAGLKPD 443

Query: 412 PVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFD 471
            VT  ++L ACA LG +S  K +H  +     ESN+ V+  LI+MYA+CG++ EA  LF 
Sbjct: 444 AVTFIAVLEACASLGRLSEVKALHAQISESELESNVVVTNTLINMYARCGSLEEAERLFA 503

Query: 472 LMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVRE 531
               K+ V+W  M++ +  +G   EAL LF EM   G++P  VT+ S+L+ C+H G + +
Sbjct: 504 AAKEKTVVSWTAMVAAFSQYGRYAEALDLFQEMDLEGVKPDDVTYTSILFVCTHGGSLEQ 563

Query: 532 GDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGAC 591
           G   F  M   HG  P A+H+A MVD+LGR+G+L  A E ++ +  EP P  W   L AC
Sbjct: 564 GWRYFTDMAELHGLAPTADHFAAMVDLLGRSGRLFDAKELLESMPFEPDPVAWMTFLTAC 623

Query: 592 MIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPG 651
            IH    L   A+E+++ELDP +   ++ +SNIY+A   + + A+VR+ +++R L K PG
Sbjct: 624 RIHGKLELGEAAAERVYELDPSSTAPYIAMSNIYAAHGMWEKVASVRKKMEERGLKKLPG 683

Query: 652 CTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKEL 711
            + IEV G  H F+SG + HP++  I   L +L+G MR AG+  +T   LHDV E EKE 
Sbjct: 684 LSFIEVDGKLHEFSSGGKYHPRTDEICEELTRLHGLMRAAGYVPDTKAVLHDVSEGEKET 743

Query: 712 MMKVHSEKLAIAFGLIATE-PGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRF 770
           M+  HSEK+AIAFGL+++   G  IR++KNLRVC DCHTATKFI+++ GR I++RD NRF
Sbjct: 744 MLLYHSEKMAIAFGLVSSRGSGEPIRVVKNLRVCSDCHTATKFIARIAGRDIILRDCNRF 803

Query: 771 HHFKG-GVCSCGDYW 784
           H F   G CSCGDYW
Sbjct: 804 HRFSSDGKCSCGDYW 818



 Score =  218 bits (556), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 152/523 (29%), Positives = 259/523 (49%), Gaps = 46/523 (8%)

Query: 106 PDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKV 165
           PDN T+  VL + S+C D + G  LH     S +  D  VG AL+ +Y K   +  AR V
Sbjct: 5   PDNVTFLTVLCSCSSCGDVAEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARSV 64

Query: 166 FDKMP--EKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNG-GTWLDSTSVAAVLPAVAE 222
           F+ M   +++ V WN+MI+   +N    +++ ++  M   G GT  D  +  +VL A + 
Sbjct: 65  FESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGT--DHVTFVSVLGACSS 122

Query: 223 VQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAM 282
           + +   G EI       G      +   LV+ Y++ G V  A+ +F+ +   D  S NA+
Sbjct: 123 LAQ---GREIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAV 179

Query: 283 ISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGI 342
           I  ++ +G    +LR+F+++     + NS+T + +I  F     L     IH+  + +G 
Sbjct: 180 ILAHSQSGDWSGALRIFKEMKCDM-KPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGF 238

Query: 343 VSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQE 402
            S+  V TAL  +Y +      AR++FD+  ++ + SWN MI  Y QNG   EA+ L+Q+
Sbjct: 239 DSDLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVQNGDFHEALELYQK 298

Query: 403 MQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGN 462
           +          T  SIL AC+ + A++ G+ VH  +  R  +S + V+TAL++MYAKCG+
Sbjct: 299 LDMEGFKRTKATFVSILGACSSVKALAQGRLVHSHILERGLDSEVAVATALVNMYAKCGS 358

Query: 463 IVEARELFDLMSHKSEVTWNTMISGYGLHGHG---------------------------- 494
           + EAR++F+ M ++  V W+T+I  Y  +G+G                            
Sbjct: 359 LEEARKVFNAMKNRDAVAWSTLIGAYASNGYGKDARKARKVFDRLGSRDTICWNAMITTY 418

Query: 495 ------LEALQLFSEML-HSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKP 547
                 + A+++F EM   +G++P  VTF++VL AC+  G + E  +   + I +   + 
Sbjct: 419 VQNGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEACASLGRLSEV-KALHAQISESELES 477

Query: 548 LAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGA 590
                  ++++  R G LE+A E +   A E     W A++ A
Sbjct: 478 NVVVTNTLINMYARCGSLEEA-ERLFAAAKEKTVVSWTAMVAA 519



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 120/509 (23%), Positives = 214/509 (42%), Gaps = 85/509 (16%)

Query: 12  FLSLLKGAKTQSQLTQ---THAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIP 68
           +++++ G  T   L +    HA+I+ +GF +DL   T L +      ++  AR +F  + 
Sbjct: 210 YINVISGFSTPEVLPEGRKIHAEIVANGFDSDLVVATALINMYGKCGSSHEAREVFDKMK 269

Query: 69  KPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGV 128
           K D+  +NV+I  +  N     ++  Y  L           T+  +L A S+    + G 
Sbjct: 270 KRDMVSWNVMIGCYVQNGDFHEALELYQKLDME-GFKRTKATFVSILGACSSVKALAQGR 328

Query: 129 LLHGHAIVSGYGSDLFVGAALVDLYFK-------------------FSW----------- 158
           L+H H +  G  S++ V  ALV++Y K                    +W           
Sbjct: 329 LVHSHILERGLDSEVAVATALVNMYAKCGSLEEARKVFNAMKNRDAVAWSTLIGAYASNG 388

Query: 159 ----VKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVA 214
                + ARKVFD++  +DT+ WN+MI+  ++N C   ++ +F +M    G   D+ +  
Sbjct: 389 YGKDARKARKVFDRLGSRDTICWNAMITTYVQNGCAVAAMKIFREMTGAAGLKPDAVTFI 448

Query: 215 AVLPAVAEVQELRLGMEIQCLGLKLG---FHDHVYVLTGLVSFYSKCGEVERAELLFRDI 271
           AVL A A +  L    E++ L  ++       +V V   L++ Y++CG +E AE LF   
Sbjct: 449 AVLEACASLGRLS---EVKALHAQISESELESNVVVTNTLINMYARCGSLEEAERLFAAA 505

Query: 272 VRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTN 331
               ++S  AM++ ++  G+   +L LF+++     + +  T   ++ V           
Sbjct: 506 KEKTVVSWTAMVAAFSQYGRYAEALDLFQEMDLEGVKPDDVTYTSILFV----------- 554

Query: 332 CIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNG 391
           C H   L+ G              ++ + E+       D         + AM+    ++G
Sbjct: 555 CTHGGSLEQGW-----------RYFTDMAELHGLAPTADH--------FAAMVDLLGRSG 595

Query: 392 LTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLG----KWVHELVKSRNFE--- 444
              +A  L + M      P+PV   + L+AC   G + LG    + V+EL  S       
Sbjct: 596 RLFDAKELLESM---PFEPDPVAWMTFLTACRIHGKLELGEAAAERVYELDPSSTAPYIA 652

Query: 445 -SNIYVSTALIDMYAKCGNIVEARELFDL 472
            SNIY +  + +  A     +E R L  L
Sbjct: 653 MSNIYAAHGMWEKVASVRKKMEERGLKKL 681


>gi|357133320|ref|XP_003568274.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Brachypodium distachyon]
          Length = 919

 Score =  475 bits (1223), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 275/779 (35%), Positives = 421/779 (54%), Gaps = 12/779 (1%)

Query: 13  LSLLKGAKTQSQLTQ----THAQIIIHGFQNDL---STVTKLAHRLSDFKATCYARALFF 65
           LS +  A T+++L Q     H Q+   GF ++    + +  L  R   F+    A  +F 
Sbjct: 146 LSSILSACTKTELFQLGRLIHVQVYKQGFFSETFVGNALISLYLRCRSFR---LADRVFC 202

Query: 66  SIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRS 125
            +   D   FN +I G +       ++  +  ++  + L+PD+ T + +L+A SA  D  
Sbjct: 203 DMLYCDSVTFNTLISGHAQCGHGDRALGIFDEMQL-SGLSPDSVTIASLLAACSAVGDLR 261

Query: 126 IGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLM 185
            G  LH + + +G   D  +  +L+DLY K   ++ A ++FD     + VLWN M+    
Sbjct: 262 KGKQLHSYLLKAGMSLDYIMEGSLLDLYVKSGDIEEALQIFDSGDRTNVVLWNLMLVAYG 321

Query: 186 KNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHV 245
           +      S  +F  M+   G   +  +   +L       E+ LG +I  L +K GF   +
Sbjct: 322 QIDDLAKSFDIFYRML-AAGVRPNKFTYPCMLRTCTHTGEIGLGEQIHSLTIKNGFQSDM 380

Query: 246 YVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLAS 305
           YV   L+  YSK G +++A+ +   I   D++S  +MI+GY  +   + +L  F+++ A 
Sbjct: 381 YVSGVLIDMYSKYGWLDKAQRILDMIEEKDVVSWTSMIAGYVQHEFCKEALETFKEMQAC 440

Query: 306 AERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAA 365
               ++  +   I        +H  + IH+    SG  ++ S+   L  +Y+R    + A
Sbjct: 441 GIWPDNIGLASAISACAGIKAVHQGSQIHARVYVSGYSADVSIWNGLVYLYARCGISKEA 500

Query: 366 RKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQL 425
              F+    K   +WN +I+G+ Q+GL EEA+ +F +M  +    N  T  S +SA A L
Sbjct: 501 FSSFEAIEHKEGITWNGLISGFAQSGLYEEALKVFMKMDQAGAKYNVFTFVSSISASANL 560

Query: 426 GAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMI 485
             I  GK +H  V    + S   +S ALI +Y KCG+I +A+  F  M+ ++EV+WNT+I
Sbjct: 561 ADIKQGKQIHARVIKTGYTSETEISNALISLYGKCGSIEDAKMDFFEMTKRNEVSWNTII 620

Query: 486 SGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGF 545
           +    HG GLEAL LF +M   G++PS VTF+ VL ACSH GLV EG   F+SM ++HG 
Sbjct: 621 TCCSQHGRGLEALDLFDQMKQQGLKPSDVTFVGVLTACSHVGLVEEGLCYFKSMSNEHGI 680

Query: 546 KPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASE 605
            P  +HYAC+VDILGRAGQL++A  F++ + +     VW  LL AC +HK+  +   A++
Sbjct: 681 HPRPDHYACVVDILGRAGQLDRAKRFVEEMPIPADSMVWRTLLSACKVHKNLEIGEFAAK 740

Query: 606 KLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFT 665
            L EL+P +   +VLLSN Y+    +     +R+++K R + K PG + IEV    H F 
Sbjct: 741 HLLELEPHDSASYVLLSNAYAVTGKWASRDQIRKIMKDRGVRKEPGRSWIEVKNVVHAFF 800

Query: 666 SGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFG 725
            GD+LHP +  IY  L  LN ++ + G++ E     H+ E+E K+    VHSEKLA+AFG
Sbjct: 801 VGDRLHPLADQIYNFLSHLNDRLYKIGYKQENYHLFHEKEKEGKDPTAFVHSEKLAVAFG 860

Query: 726 LIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           L++      +R+IKNLRVC DCHT  KF S V GR IV+RD  RFHHF  G CSCGDYW
Sbjct: 861 LMSLPSCMPLRVIKNLRVCNDCHTWMKFTSGVMGREIVLRDVYRFHHFNNGSCSCGDYW 919



 Score =  232 bits (591), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 159/575 (27%), Positives = 285/575 (49%), Gaps = 14/575 (2%)

Query: 25  LTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKA----TCYARALFFSIPKPDLFLFNVIIR 80
           + + HA+ II G    LS    + + L D  A       AR +F  +   D   +  ++ 
Sbjct: 61  VPEIHAKAIICG----LSGYRIIGNLLIDLYAKKGFVRRARRVFEELSVRDNVSWVAVLS 116

Query: 81  GFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYG 140
           G++ N + + ++  Y  + + + + P  +  S +LSA +      +G L+H      G+ 
Sbjct: 117 GYAQNGLGEEAVRLYREMHR-SGVVPTPYVLSSILSACTKTELFQLGRLIHVQVYKQGFF 175

Query: 141 SDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDM 200
           S+ FVG AL+ LY +    + A +VF  M   D+V +N++ISG    C   D      D 
Sbjct: 176 SETFVGNALISLYLRCRSFRLADRVFCDMLYCDSVTFNTLISG-HAQCGHGDRALGIFDE 234

Query: 201 VRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGE 260
           ++  G   DS ++A++L A + V +LR G ++    LK G      +   L+  Y K G+
Sbjct: 235 MQLSGLSPDSVTIASLLAACSAVGDLRKGKQLHSYLLKAGMSLDYIMEGSLLDLYVKSGD 294

Query: 261 VERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPV 320
           +E A  +F    R +++  N M+  Y        S  +F ++LA+  R N  T   ++  
Sbjct: 295 IEEALQIFDSGDRTNVVLWNLMLVAYGQIDDLAKSFDIFYRMLAAGVRPNKFTYPCMLRT 354

Query: 321 FYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASW 380
               G + L   IHS  +K+G  S+  V   L  +YS+   ++ A+++ D   EK + SW
Sbjct: 355 CTHTGEIGLGEQIHSLTIKNGFQSDMYVSGVLIDMYSKYGWLDKAQRILDMIEEKDVVSW 414

Query: 381 NAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKS 440
            +MIAGY Q+   +EA+  F+EMQA  + P+ + ++S +SACA + A+  G  +H  V  
Sbjct: 415 TSMIAGYVQHEFCKEALETFKEMQACGIWPDNIGLASAISACAGIKAVHQGSQIHARVYV 474

Query: 441 RNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQL 500
             + +++ +   L+ +YA+CG   EA   F+ + HK  +TWN +ISG+   G   EAL++
Sbjct: 475 SGYSADVSIWNGLVYLYARCGISKEAFSSFEAIEHKEGITWNGLISGFAQSGLYEEALKV 534

Query: 501 FSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILG 560
           F +M  +G + +  TF+S + A ++   +++G +I   +I   G+    E    ++ + G
Sbjct: 535 FMKMDQAGAKYNVFTFVSSISASANLADIKQGKQIHARVIKT-GYTSETEISNALISLYG 593

Query: 561 RAGQLEKA-LEFIKGLAVEPGPAVWGALLGACMIH 594
           + G +E A ++F +    +     W  ++  C  H
Sbjct: 594 KCGSIEDAKMDFFE--MTKRNEVSWNTIITCCSQH 626



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 136/491 (27%), Positives = 244/491 (49%), Gaps = 6/491 (1%)

Query: 130 LHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCC 189
           +H  AI+ G      +G  L+DLY K  +V+ AR+VF+++  +D V W +++SG  +N  
Sbjct: 64  IHAKAIICGLSGYRIIGNLLIDLYAKKGFVRRARRVFEELSVRDNVSWVAVLSGYAQNGL 123

Query: 190 FQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLT 249
            ++++ ++ +M R+ G       ++++L A  + +  +LG  I     K GF    +V  
Sbjct: 124 GEEAVRLYREMHRS-GVVPTPYVLSSILSACTKTELFQLGRLIHVQVYKQGFFSETFVGN 182

Query: 250 GLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERV 309
            L+S Y +C     A+ +F D++  D ++ N +ISG+   G  + +L +F ++  S    
Sbjct: 183 ALISLYLRCRSFRLADRVFCDMLYCDSVTFNTLISGHAQCGHGDRALGIFDEMQLSGLSP 242

Query: 310 NSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLF 369
           +S TI  L+      G L     +HS+ LK+G+  +  +  +L  +Y +  ++E A ++F
Sbjct: 243 DSVTIASLLAACSAVGDLRKGKQLHSYLLKAGMSLDYIMEGSLLDLYVKSGDIEEALQIF 302

Query: 370 DESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAIS 429
           D     ++  WN M+  Y Q     ++  +F  M A+ V PN  T   +L  C   G I 
Sbjct: 303 DSGDRTNVVLWNLMLVAYGQIDDLAKSFDIFYRMLAAGVRPNKFTYPCMLRTCTHTGEIG 362

Query: 430 LGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYG 489
           LG+ +H L     F+S++YVS  LIDMY+K G + +A+ + D++  K  V+W +MI+GY 
Sbjct: 363 LGEQIHSLTIKNGFQSDMYVSGVLIDMYSKYGWLDKAQRILDMIEEKDVVSWTSMIAGYV 422

Query: 490 LHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLA 549
            H    EAL+ F EM   GI P  +   S + AC+    V +G +I  + ++  G+    
Sbjct: 423 QHEFCKEALETFKEMQACGIWPDNIGLASAISACAGIKAVHQGSQI-HARVYVSGYSADV 481

Query: 550 EHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFE 609
             +  +V +  R G  ++A    + +  + G   W  L+        + L   A +   +
Sbjct: 482 SIWNGLVYLYARCGISKEAFSSFEAIEHKEG-ITWNGLISG---FAQSGLYEEALKVFMK 537

Query: 610 LDPENVGYHVL 620
           +D     Y+V 
Sbjct: 538 MDQAGAKYNVF 548


>gi|359488803|ref|XP_002272525.2| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g09950 [Vitis vinifera]
          Length = 1291

 Score =  475 bits (1223), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 235/538 (43%), Positives = 331/538 (61%)

Query: 247  VLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASA 306
            +LT     Y     ++ A ++F DI  P     N MI G+  +G+  SSL L+ +++   
Sbjct: 754  ILTKFAIMYVSFNRIDAASIVFEDIPNPCSFLWNVMIRGFATDGRFLSSLELYSKMMEKG 813

Query: 307  ERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAAR 366
             + +       +        L     IH   +  G  ++  V  AL  +Y++  ++EAAR
Sbjct: 814  LKPDKFAFPFALKSCAGLSDLQRGKVIHQHLVCCGCSNDLFVDAALVDMYAKCGDIEAAR 873

Query: 367  KLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLG 426
             +FD+ + + L SW +MI+GY  NG   E +  F  M++S V PN V++ S+L AC  LG
Sbjct: 874  LVFDKMAVRDLVSWTSMISGYAHNGYNSETLGFFDLMRSSGVIPNRVSILSVLLACGNLG 933

Query: 427  AISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMIS 486
            A+  G+W H  V    FE +I V+TA++DMY+KCG++  AR LFD  + K  V W+ MI+
Sbjct: 934  ALRKGEWFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLARCLFDETAGKDLVCWSAMIA 993

Query: 487  GYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFK 546
             YG+HGHG +A+ LF +M+ +G+RPS VTF  VL ACSH+GL+ EG   FQ M  +    
Sbjct: 994  SYGIHGHGRKAIDLFDQMVKAGVRPSHVTFTCVLSACSHSGLLEEGKMYFQLMTEEFVIA 1053

Query: 547  PLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEK 606
                +YACMVD+LGRAGQL +A++ I+ + VEP  ++WG+LLGAC IH + +LA   ++ 
Sbjct: 1054 RKLSNYACMVDLLGRAGQLSEAVDLIENMPVEPDASIWGSLLGACRIHNNLDLAEKIADH 1113

Query: 607  LFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTS 666
            LF LDP + GYHVLLSNIY+A+  + +   VR+++ +R   K  G +L+E     H F  
Sbjct: 1114 LFHLDPVHAGYHVLLSNIYAAKSRWNEVEKVRKMMARRGANKIQGFSLVEYDNQVHKFGV 1173

Query: 667  GDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGL 726
            GD+ HPQ   +YA LE+L   M+  G+   T   LHD+EEE KE  +  HSE+LAIAFGL
Sbjct: 1174 GDRSHPQWEKLYAKLEELAAPMKHLGYVPLTDFVLHDIEEEAKEAALSYHSERLAIAFGL 1233

Query: 727  IATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
            I T PGT +RI KNLR+C DCH A K ISK+  RVI+VRD +RFH F+ GVCSCGDYW
Sbjct: 1234 INTSPGTTLRITKNLRICGDCHNAIKLISKIVNRVILVRDMHRFHRFEDGVCSCGDYW 1291



 Score =  437 bits (1123), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 240/699 (34%), Positives = 392/699 (56%), Gaps = 2/699 (0%)

Query: 7   QSRNLFLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFS 66
           +SR + + L +       ++Q H+Q+   G  +D    TKL    +   +   AR +F  
Sbjct: 2   RSRQVLVDLFQACNNGRSVSQLHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVFDE 61

Query: 67  IPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSI 126
            P P++ L+N  +R +   +  + ++  +  +       PDNFT    L A +      +
Sbjct: 62  TPHPNVHLWNSTLRSYCREKQWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLEL 121

Query: 127 GVLLHGHAIVSG-YGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLM 185
           G ++HG A  +   GSD+FVG+ALV+LY K   +  A KVF++    DTVLW SM++G  
Sbjct: 122 GKVIHGFAKKNDEIGSDMFVGSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQ 181

Query: 186 KNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHV 245
           +N   ++++ +F  MV      LD  ++ +V+ A A++  ++ G  +  L ++  F   +
Sbjct: 182 QNNDPEEALALFSQMVMMDCVVLDPVTLVSVVSACAQLLNVKAGSCVHGLVIRREFDGDL 241

Query: 246 YVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLAS 305
            ++  L++ Y+K G  + A  LF  +   D+IS + MI+ Y  N     +L LF +++  
Sbjct: 242 PLVNSLLNLYAKTGCEKIAANLFSKMPEKDVISWSTMIACYANNEAANEALNLFHEMIEK 301

Query: 306 AERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAA 365
               NS T+V  +       +L     IH   +  G   + SV TAL  +Y + +  + A
Sbjct: 302 RFEPNSVTVVSALQACAVSRNLEEGKKIHKIAVWKGFELDFSVSTALIDMYMKCSCPDEA 361

Query: 366 RKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQL 425
             LF    +K + SW A+++GY QNG+  +++ +F+ M +  + P+ V V  IL+A ++L
Sbjct: 362 VDLFQRLPKKDVVSWVALLSGYAQNGMAYKSMGVFRNMLSDGIQPDAVAVVKILAASSEL 421

Query: 426 GAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMI 485
           G       +H  V    F SN++V  +LI++Y+KCG++ +A +LF  M  +  V W++MI
Sbjct: 422 GIFQQALCLHGYVVRSGFNSNVFVGASLIELYSKCGSLGDAVKLFKGMIVRDVVIWSSMI 481

Query: 486 SGYGLHGHGLEALQLFSEML-HSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHG 544
           + YG+HG G EAL++F +M+ +S +RP+ VTFLS+L ACSHAGLV EG +IF  M+HD+ 
Sbjct: 482 AAYGIHGRGGEALEIFDQMVKNSTVRPNNVTFLSILSACSHAGLVEEGLKIFDRMVHDYQ 541

Query: 545 FKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVAS 604
            +P +EH+  MVD+LGR GQL KA++ I  + +  GP VWGALLGAC IH +  +   A+
Sbjct: 542 LRPDSEHFGIMVDLLGRIGQLGKAMDIINRMPIPAGPHVWGALLGACRIHHNIEMGEAAA 601

Query: 605 EKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVF 664
           + LF LDP + GY++LLSNIY+ +  +   A +R  +K+R L K  G +++EV G  H F
Sbjct: 602 KNLFWLDPSHAGYYILLSNIYAVDGKWDNVAELRTRIKERGLKKMFGQSMVEVRGGVHSF 661

Query: 665 TSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHD 703
            + D+ HP S  IY +L KL  +M +  +  +    LHD
Sbjct: 662 LASDRFHPDSQKIYELLRKLEAQMGKEVYIPDLDFLLHD 700



 Score =  182 bits (463), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 126/400 (31%), Positives = 192/400 (48%), Gaps = 35/400 (8%)

Query: 23   SQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGF 82
            S L +THA+I  +G Q D   +TK A     F     A  +F  IP P  FL+NV+IRGF
Sbjct: 734  SCLKKTHAKIFAYGLQYDSRILTKFAIMYVSFNRIDAASIVFEDIPNPCSFLWNVMIRGF 793

Query: 83   SNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSD 142
            + +    SS+  Y+ + +   L PD F + F L + +   D   G ++H H +  G  +D
Sbjct: 794  ATDGRFLSSLELYSKMMEK-GLKPDKFAFPFALKSCAGLSDLQRGKVIHQHLVCCGCSND 852

Query: 143  LFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVR 202
            LFV AALVD+Y K   +++AR VFDKM  +D V W SMISG   N    +++  F D++R
Sbjct: 853  LFVDAALVDMYAKCGDIEAARLVFDKMAVRDLVSWTSMISGYAHNGYNSETLGFF-DLMR 911

Query: 203  NGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVE 262
            + G   +  S+ +VL A   +  LR G       ++ GF   + V T ++  YSKCG ++
Sbjct: 912  SSGVIPNRVSILSVLLACGNLGALRKGEWFHSYVIQTGFEFDILVATAIMDMYSKCGSLD 971

Query: 263  RAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFY 322
             A  LF +    DL+  +AMI+ Y  +G    ++ LF Q++ +  R +  T         
Sbjct: 972  LARCLFDETAGKDLVCWSAMIASYGIHGHGRKAIDLFDQMVKAGVRPSHVTF-------- 1023

Query: 323  PFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNA 382
                     C+ S C  SG++    +   L T      E   ARK         L+++  
Sbjct: 1024 --------TCVLSACSHSGLLEEGKMYFQLMT-----EEFVIARK---------LSNYAC 1061

Query: 383  MIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSAC 422
            M+    + G   EA+ L + M    V P+     S+L AC
Sbjct: 1062 MVDLLGRAGQLSEAVDLIENM---PVEPDASIWGSLLGAC 1098



 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 112/395 (28%), Positives = 195/395 (49%), Gaps = 6/395 (1%)

Query: 133  HAIVSGYG--SDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCF 190
            HA +  YG   D  +      +Y  F+ + +A  VF+ +P   + LWN MI G   +  F
Sbjct: 740  HAKIFAYGLQYDSRILTKFAIMYVSFNRIDAASIVFEDIPNPCSFLWNVMIRGFATDGRF 799

Query: 191  QDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTG 250
              S+ ++  M+  G    D  +    L + A + +L+ G  I    +  G  + ++V   
Sbjct: 800  LSSLELYSKMMEKGLK-PDKFAFPFALKSCAGLSDLQRGKVIHQHLVCCGCSNDLFVDAA 858

Query: 251  LVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVN 310
            LV  Y+KCG++E A L+F  +   DL+S  +MISGY  NG    +L  F  + +S    N
Sbjct: 859  LVDMYAKCGDIEAARLVFDKMAVRDLVSWTSMISGYAHNGYNSETLGFFDLMRSSGVIPN 918

Query: 311  SSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFD 370
              +I+ ++      G L      HS+ +++G   +  V TA+  +YS+   ++ AR LFD
Sbjct: 919  RVSILSVLLACGNLGALRKGEWFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLARCLFD 978

Query: 371  ESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISL 430
            E++ K L  W+AMIA Y  +G   +AI LF +M  + V P+ VT + +LSAC+  G +  
Sbjct: 979  ETAGKDLVCWSAMIASYGIHGHGRKAIDLFDQMVKAGVRPSHVTFTCVLSACSHSGLLEE 1038

Query: 431  GKWVHELVKSRNFESNIYVSTA-LIDMYAKCGNIVEARELFDLMSHKSEVT-WNTMISGY 488
            GK   +L+      +    + A ++D+  + G + EA +L + M  + + + W +++   
Sbjct: 1039 GKMYFQLMTEEFVIARKLSNYACMVDLLGRAGQLSEAVDLIENMPVEPDASIWGSLLGAC 1098

Query: 489  GLHGHGLEALQLFSEMLHSGIRPSGV-TFLSVLYA 522
             +H +   A ++   + H     +G    LS +YA
Sbjct: 1099 RIHNNLDLAEKIADHLFHLDPVHAGYHVLLSNIYA 1133



 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 144/594 (24%), Positives = 261/594 (43%), Gaps = 54/594 (9%)

Query: 29  HAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNEMP 88
           H  ++  GF +++     L    S   +   A  LF  +   D+ +++ +I  +  +   
Sbjct: 431 HGYVVRSGFNSNVFVGASLIELYSKCGSLGDAVKLFKGMIVRDVVIWSSMIAAYGIHGRG 490

Query: 89  KSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVG-- 146
             ++  +  + KN+ + P+N T+  +LSA S       G++  G  I      D  +   
Sbjct: 491 GEALEIFDQMVKNSTVRPNNVTFLSILSACS-----HAGLVEEGLKIFDRMVHDYQLRPD 545

Query: 147 ----AALVDLYFKFSWVKSARKVFDKMP-EKDTVLWNSMISGLMKNCCFQDSIWVFGDMV 201
                 +VDL  +   +  A  + ++MP      +W +++      C    +I + G+  
Sbjct: 546 SEHFGIMVDLLGRIGQLGKAMDIINRMPIPAGPHVWGALLGA----CRIHHNIEM-GEAA 600

Query: 202 RNGGTWLDST---------SVAAVLPAVAEVQELRLGMEIQCLGLKLGF-HDHVYVLTGL 251
                WLD +         ++ AV      V ELR    I+  GLK  F    V V  G+
Sbjct: 601 AKNLFWLDPSHAGYYILLSNIYAVDGKWDNVAELR--TRIKERGLKKMFGQSMVEVRGGV 658

Query: 252 VSFYS---------KCGEVERA--ELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFR 300
            SF +         K  E+ R     + +++  PDL   + ++        T + L+ ++
Sbjct: 659 HSFLASDRFHPDSQKIYELLRKLEAQMGKEVYIPDL---DFLLH------DTGAVLQFWQ 709

Query: 301 QLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLN 360
           ++ A+  +  +   +G  P              H+     G+  +S +LT  + +Y   N
Sbjct: 710 RIKATESKYKT---IGSAPGTDTISCFSCLKKTHAKIFAYGLQYDSRILTKFAIMYVSFN 766

Query: 361 EMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILS 420
            ++AA  +F++        WN MI G+  +G    ++ L+ +M    + P+       L 
Sbjct: 767 RIDAASIVFEDIPNPCSFLWNVMIRGFATDGRFLSSLELYSKMMEKGLKPDKFAFPFALK 826

Query: 421 ACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVT 480
           +CA L  +  GK +H+ +      ++++V  AL+DMYAKCG+I  AR +FD M+ +  V+
Sbjct: 827 SCAGLSDLQRGKVIHQHLVCCGCSNDLFVDAALVDMYAKCGDIEAARLVFDKMAVRDLVS 886

Query: 481 WNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMI 540
           W +MISGY  +G+  E L  F  M  SG+ P+ V+ LSVL AC + G +R+G E F S +
Sbjct: 887 WTSMISGYAHNGYNSETLGFFDLMRSSGVIPNRVSILSVLLACGNLGALRKG-EWFHSYV 945

Query: 541 HDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIH 594
              GF+        ++D+  + G L+ A       A +     W A++ +  IH
Sbjct: 946 IQTGFEFDILVATAIMDMYSKCGSLDLARCLFDETAGKD-LVCWSAMIASYGIH 998


>gi|224108621|ref|XP_002314911.1| predicted protein [Populus trichocarpa]
 gi|222863951|gb|EEF01082.1| predicted protein [Populus trichocarpa]
          Length = 743

 Score =  475 bits (1222), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 267/751 (35%), Positives = 409/751 (54%), Gaps = 73/751 (9%)

Query: 66  SIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRS 125
           S+  P+ FL+N +I  +S       +I +  H+       P++F+++ +LSA S   D S
Sbjct: 34  SLTNPETFLYNNLINAYSK----LGNITYARHVFDKMP-QPNSFSWNTMLSAYSKSGDLS 88

Query: 126 IGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLM 185
                                              + +++F  MP +D V WNS+ISG +
Sbjct: 89  -----------------------------------TMQEIFSIMPNRDGVSWNSLISGYV 113

Query: 186 KNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHV 245
                 +++  +  M+++G   L+  + + +L  V+    + LG +I    +K GF  +V
Sbjct: 114 CYGSVVEAVKTYNSMMKDGVLNLNRITFSTMLLLVSSQGCVDLGRQIHGQIVKFGFGAYV 173

Query: 246 YVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLAS 305
           +V + LV  Y+K G V  A  +F ++   +++  N MI+G   +G  + S RLF  +   
Sbjct: 174 FVGSSLVDMYAKMGLVSVASQVFDEVQERNVVMYNTMITGLLRSGMVKDSKRLFHGMKER 233

Query: 306 AERVNSSTIVGLI---------PVF------------YPFGHLHLTNC-----------I 333
                ++ I GLI          +F            Y FG + LT C           I
Sbjct: 234 DSISWTTMITGLIQNGLEAEAMDLFRDMRQEGMAMDQYTFGSV-LTACGGLRALKEGKEI 292

Query: 334 HSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLT 393
           H+  ++SG   N  V +AL  +Y +   +  A  +F   + K++ SW AM+ GY QNG +
Sbjct: 293 HTLIIRSGYNHNVFVGSALVDMYCKCRSVRYAEAVFKRMANKNVVSWTAMLVGYGQNGFS 352

Query: 394 EEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTAL 453
           EEA+ +F +MQ + + P+  T+ S++S+CA L ++  G   H         S I VS AL
Sbjct: 353 EEAVRVFCDMQRNGIEPDDFTLGSVISSCANLASLEEGAQFHCQALVSGLISFITVSNAL 412

Query: 454 IDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSG 513
           I +Y KCG+I ++ +LFD MS + EV+W  ++SGY   G   E + LF  ML  G++P  
Sbjct: 413 ITLYGKCGSIEDSNQLFDEMSFRDEVSWTALVSGYAQFGKANETIDLFERMLVQGLKPDA 472

Query: 514 VTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIK 573
           VTF++VL ACS AGLV  G + F+SM+ DHG  P ++HY CM+D+ GRAG+LE+A  FI 
Sbjct: 473 VTFIAVLSACSRAGLVERGQQYFESMLKDHGIIPFSDHYTCMIDLFGRAGRLEEAKNFIN 532

Query: 574 GLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQ 633
            +   P    W  LL +C ++ +  + + A+E L ELDP+N   ++LLS+IY+A+  +  
Sbjct: 533 KMPFSPDSIGWATLLSSCRLYGNEEIGKWAAESLLELDPQNPAGYILLSSIYAAKGKWSN 592

Query: 634 AATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGF 693
            A +R+ ++++   K PG + I+     ++F++ DQ  P S  IYA LEKLN KM E G+
Sbjct: 593 VAQLRRGMREKGARKEPGFSWIKYKSKVYIFSADDQSSPFSDQIYAELEKLNHKMIEEGY 652

Query: 694 QTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKF 753
             +  + LHDVE+ EK  M+  HSEKLAIAFGL+    G  IR++KNLRVC DCH ATK+
Sbjct: 653 VPDASSVLHDVEDSEKMKMLNHHSEKLAIAFGLLFIPHGLPIRVVKNLRVCGDCHNATKY 712

Query: 754 ISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           ISK++ R I+VRDA RFH FK G CSCGD+W
Sbjct: 713 ISKISQREILVRDAVRFHLFKDGTCSCGDFW 743



 Score =  212 bits (540), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 151/571 (26%), Positives = 269/571 (47%), Gaps = 72/571 (12%)

Query: 20  KTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVII 79
           + Q+Q  + H  II      +      L +  S      YAR +F  +P+P+ F +N ++
Sbjct: 19  RNQTQAKKLHCLIIKSLTNPETFLYNNLINAYSKLGNITYARHVFDKMPQPNSFSWNTML 78

Query: 80  RGFSN----------------------NEMPKSSICF---------YTHLRKNTALTPDN 108
             +S                       N +    +C+         Y  + K+  L  + 
Sbjct: 79  SAYSKSGDLSTMQEIFSIMPNRDGVSWNSLISGYVCYGSVVEAVKTYNSMMKDGVLNLNR 138

Query: 109 FTYS--FVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVF 166
            T+S   +L ++  C D  +G  +HG  +  G+G+ +FVG++LVD+Y K   V  A +VF
Sbjct: 139 ITFSTMLLLVSSQGCVD--LGRQIHGQIVKFGFGAYVFVGSSLVDMYAKMGLVSVASQVF 196

Query: 167 DKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDM---------------VRNG------- 204
           D++ E++ V++N+MI+GL+++   +DS  +F  M               ++NG       
Sbjct: 197 DEVQERNVVMYNTMITGLLRSGMVKDSKRLFHGMKERDSISWTTMITGLIQNGLEAEAMD 256

Query: 205 --------GTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYS 256
                   G  +D  +  +VL A   ++ L+ G EI  L ++ G++ +V+V + LV  Y 
Sbjct: 257 LFRDMRQEGMAMDQYTFGSVLTACGGLRALKEGKEIHTLIIRSGYNHNVFVGSALVDMYC 316

Query: 257 KCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVG 316
           KC  V  AE +F+ +   +++S  AM+ GY  NG +E ++R+F  +  +    +  T+  
Sbjct: 317 KCRSVRYAEAVFKRMANKNVVSWTAMLVGYGQNGFSEEAVRVFCDMQRNGIEPDDFTLGS 376

Query: 317 LIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKS 376
           +I        L      H   L SG++S  +V  AL T+Y +   +E + +LFDE S + 
Sbjct: 377 VISSCANLASLEEGAQFHCQALVSGLISFITVSNALITLYGKCGSIEDSNQLFDEMSFRD 436

Query: 377 LASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLG-KWVH 435
             SW A+++GY Q G   E I LF+ M    + P+ VT  ++LSAC++ G +  G ++  
Sbjct: 437 EVSWTALVSGYAQFGKANETIDLFERMLVQGLKPDAVTFIAVLSACSRAGLVERGQQYFE 496

Query: 436 ELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSE-VTWNTMISGYGLHGH- 493
            ++K           T +ID++ + G + EA+   + M    + + W T++S   L+G+ 
Sbjct: 497 SMLKDHGIIPFSDHYTCMIDLFGRAGRLEEAKNFINKMPFSPDSIGWATLLSSCRLYGNE 556

Query: 494 --GLEALQLFSEMLHSGIRPSGVTFLSVLYA 522
             G  A +   E+      P+G   LS +YA
Sbjct: 557 EIGKWAAESLLEL--DPQNPAGYILLSSIYA 585


>gi|359497398|ref|XP_002270940.2| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
           [Vitis vinifera]
          Length = 640

 Score =  474 bits (1221), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 253/660 (38%), Positives = 378/660 (57%), Gaps = 42/660 (6%)

Query: 128 VLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKS---ARKVFDKMPEKDTVLWNSMISGL 184
           + +H   I +    + FV A L+   F  S       AR VFD++P  DT +WN+MI   
Sbjct: 20  IQIHALIIKTSLDGNNFVLAKLLRRLFACSSANDLLYARSVFDEIPSPDTFIWNTMIRAY 79

Query: 185 MKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDH 244
           + +   Q+S+ +F  M       +DS S++ V+ A   +++   G ++    LK+G    
Sbjct: 80  LNSQNPQESMSLFFQMRHQECIPIDSYSLSLVIQACGRLKDPGNGQKLHTQVLKIGLGSD 139

Query: 245 VYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLA 304
           ++V T L+  Y+K G++E A  +  ++  PDL+  N +++ Y   G+   +  LF ++  
Sbjct: 140 LFVETALIEMYAKFGDIEIARNILDEMAHPDLVPYNVLLAEYVRVGEINLAHDLFDRM-P 198

Query: 305 SAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEA 364
             + V+ +T++         GH                              + L ++  
Sbjct: 199 ERDLVSWNTMI--------HGH------------------------------ASLGDVGT 220

Query: 365 ARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQ 424
           A+KLFD + E+ L SW++MIA Y +   + EA+ LF EMQ + V P+ VT+ S+LSAC  
Sbjct: 221 AKKLFDRTCERDLISWSSMIAAYAKARQSNEALRLFHEMQLANVLPDKVTMVSVLSACGD 280

Query: 425 LGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTM 484
           +GA+ +GK +HE ++    E ++ + T+L+DMYAKCG+I  +  +F+ M+++    W+ M
Sbjct: 281 VGALGMGKMIHECIERNRIEIDLKLGTSLVDMYAKCGDIDNSLRVFNGMNNRDVFAWSAM 340

Query: 485 ISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHG 544
           I G   HG G  AL  FS+M+   I+P+ VTF+ VL ACSH GLV EG   F SM   + 
Sbjct: 341 IMGLANHGFGELALDHFSKMISEDIKPNDVTFIGVLSACSHIGLVDEGWTYFTSMSKVYD 400

Query: 545 FKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVAS 604
             P  EHY C+VDILGRAG+L++A+E IK +   P   VW ALLGAC I+K+  +A  A+
Sbjct: 401 VSPKIEHYGCVVDILGRAGRLQEAMELIKSMPFAPDAIVWRALLGACRIYKNVEIAEEAT 460

Query: 605 EKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVF 664
             L EL+P   G +VLLSNIYS  +++ +   VR+++K   + K PG + IEV    H F
Sbjct: 461 VNLLELEPHVDGNYVLLSNIYSQAKEWDKVVNVRRMMKNINIQKVPGSSSIEVDNAVHEF 520

Query: 665 TSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAF 724
            +GDQ HP+S  I  ML ++  +++  G+   T + L D +E+EKE  +  HSEKLAIAF
Sbjct: 521 VAGDQSHPESKKILRMLSEITARLKANGYAPLTASVLQDFDEKEKENALAHHSEKLAIAF 580

Query: 725 GLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           GL++T PG+ IRI+KNLRVC DCH A K IS+   R I+VRD NRFHHF  G CSC DYW
Sbjct: 581 GLLSTAPGSTIRIVKNLRVCDDCHIAIKLISRTYKRRIIVRDRNRFHHFVNGSCSCKDYW 640



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 124/484 (25%), Positives = 205/484 (42%), Gaps = 117/484 (24%)

Query: 13  LSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRL---SDFKATCYARALFFSIPK 69
           +SLL+ A   +Q+ Q HA II      +   + KL  RL   S      YAR++F  IP 
Sbjct: 7   MSLLQNATKLNQIIQIHALIIKTSLDGNNFVLAKLLRRLFACSSANDLLYARSVFDEIPS 66

Query: 70  PDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVL 129
           PD F++N +IR + N++ P+ S+  +  +R    +  D+++ S V+ A     D   G  
Sbjct: 67  PDTFIWNTMIRAYLNSQNPQESMSLFFQMRHQECIPIDSYSLSLVIQACGRLKDPGNGQK 126

Query: 130 LHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKV------------------------ 165
           LH   +  G GSDLFV  AL+++Y KF  ++ AR +                        
Sbjct: 127 LHTQVLKIGLGSDLFVETALIEMYAKFGDIEIARNILDEMAHPDLVPYNVLLAEYVRVGE 186

Query: 166 -------FDKMPEKDTVLWNSMISG------------LMKNCCFQDSI-W---------- 195
                  FD+MPE+D V WN+MI G            L    C +D I W          
Sbjct: 187 INLAHDLFDRMPERDLVSWNTMIHGHASLGDVGTAKKLFDRTCERDLISWSSMIAAYAKA 246

Query: 196 --------VFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEI-QC-------LGLKL 239
                   +F +M +      D  ++ +VL A  +V  L +G  I +C       + LKL
Sbjct: 247 RQSNEALRLFHEM-QLANVLPDKVTMVSVLSACGDVGALGMGKMIHECIERNRIEIDLKL 305

Query: 240 GFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLF 299
           G        T LV  Y+KCG+++ +  +F  +   D+ + +AMI G   +G  E +L  F
Sbjct: 306 G--------TSLVDMYAKCGDIDNSLRVFNGMNNRDVFAWSAMIMGLANHGFGELALDHF 357

Query: 300 RQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNS-SVLTALSTVYSR 358
            ++++   + N  T +G++                S C   G+V    +  T++S VY  
Sbjct: 358 SKMISEDIKPNDVTFIGVL----------------SACSHIGLVDEGWTYFTSMSKVYDV 401

Query: 359 LNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSI 418
             ++E                +  ++    + G  +EA+ L + M     AP+ +   ++
Sbjct: 402 SPKIE---------------HYGCVVDILGRAGRLQEAMELIKSM---PFAPDAIVWRAL 443

Query: 419 LSAC 422
           L AC
Sbjct: 444 LGAC 447


>gi|296087368|emb|CBI33742.3| unnamed protein product [Vitis vinifera]
          Length = 562

 Score =  474 bits (1221), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 226/466 (48%), Positives = 303/466 (65%), Gaps = 11/466 (2%)

Query: 330 TNCIHSFCLKSGIVSNSSV-----------LTALSTVYSRLNEMEAARKLFDESSEKSLA 378
           T  IH   L+  +VS   +           LTA+ T Y++  E++AAR LFD   E+   
Sbjct: 97  TAIIHGHALRGDVVSAQQLFDTMPEKSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGV 156

Query: 379 SWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELV 438
            WN MI GYTQNG+  EA+ LF+ M  +K  PN VTV S+LSAC QLGA+  G+WVH  +
Sbjct: 157 CWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYI 216

Query: 439 KSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEAL 498
           ++   + N++V TAL+DMY+KCG++ +AR +FD +  K  V WN+MI GY +HG   EAL
Sbjct: 217 ENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMHGFSQEAL 276

Query: 499 QLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDI 558
           QLF  M   G+ P+ +TF+ +L AC H+G V EG +IF  M  ++G +P  EHY CMV++
Sbjct: 277 QLFKSMCRMGLHPTNITFIGILSACGHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNL 336

Query: 559 LGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYH 618
           LGRAG +E+A E +K + +EP P +WG LLGAC +H    L     E L + +  N G +
Sbjct: 337 LGRAGHVEQAYELVKNMNIEPDPVLWGTLLGACRLHGKIALGEKIVELLVDQNLANSGTY 396

Query: 619 VLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIY 678
           +LLSNIY+A  ++   A +R ++K   + K PGC+ IEV    H F +G   HP+   IY
Sbjct: 397 ILLSNIYAAVGNWDGVARLRTMMKDSGVKKEPGCSSIEVNNKVHEFLAGGLNHPKRKEIY 456

Query: 679 AMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRII 738
            MLE++NG ++  G+  +T   LHD+ E EKE  ++VHSEKLAIAFGLI T+PGT I+I+
Sbjct: 457 MMLEEINGWLKSHGYTPQTDIVLHDIGETEKERSLEVHSEKLAIAFGLINTQPGTTIKIV 516

Query: 739 KNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           KNLRVC DCH  TK ISK+TGR IVVRD NRFHHF  G CSCGDYW
Sbjct: 517 KNLRVCADCHEVTKLISKITGRKIVVRDRNRFHHFVNGSCSCGDYW 562



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 91/304 (29%), Positives = 156/304 (51%), Gaps = 10/304 (3%)

Query: 248 LTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAE 307
           LT +++ Y+K GE++ A +LF  +   D +  N MI GYT NG    +L LFR++L +  
Sbjct: 127 LTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKA 186

Query: 308 RVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARK 367
           + N  T++ ++      G L     +HS+   +GI  N  V TAL  +YS+   +E AR 
Sbjct: 187 KPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDARL 246

Query: 368 LFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGA 427
           +FD+  +K + +WN+MI GY  +G ++EA+ LF+ M    + P  +T   ILSAC   G 
Sbjct: 247 VFDKIDDKDVVAWNSMIVGYAMHGFSQEALQLFKSMCRMGLHPTNITFIGILSACGHSGW 306

Query: 428 ISLGKWVHELVKSR-NFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSE-VTWNTMI 485
           ++ G  +   +K     E  I     ++++  + G++ +A EL   M+ + + V W T++
Sbjct: 307 VTEGWDIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDPVLWGTLL 366

Query: 486 SGYGLHGHGLEALQLFSEMLHSGIRPSGV-TFLSVLYAC--SHAGLVREGDEIFQSMIHD 542
               LHG      ++   ++   +  SG    LS +YA   +  G+ R      ++M+ D
Sbjct: 367 GACRLHGKIALGEKIVELLVDQNLANSGTYILLSNIYAAVGNWDGVAR-----LRTMMKD 421

Query: 543 HGFK 546
            G K
Sbjct: 422 SGVK 425



 Score =  122 bits (307), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 117/457 (25%), Positives = 190/457 (41%), Gaps = 79/457 (17%)

Query: 8   SRNLFLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSI 67
           S N    L+  +KT S L Q HA +  HG  +      KL    +      Y+ ALF   
Sbjct: 29  STNRLAVLIDKSKTISHLLQIHAVLFRHGLDHHPILNFKLQRSYASLGRLDYSVALFGRT 88

Query: 68  PKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIG 127
             P +F +  II G +              LR +       F             ++S+ 
Sbjct: 89  QNPSVFFWTAIIHGHA--------------LRGDVVSAQQLF---------DTMPEKSLV 125

Query: 128 VLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKN 187
            L                  A++  Y K   + +AR +FD M E+D V WN MI G  +N
Sbjct: 126 SL-----------------TAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQN 168

Query: 188 CCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYV 247
               +++ +F  M++      +  +V +VL A  ++  L  G  +       G   +V+V
Sbjct: 169 GMPNEALVLFRRMLKAKAK-PNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHV 227

Query: 248 LTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAE 307
            T LV  YSKCG +E A L+F  I   D+++ N+MI GY  +G ++ +L+LF+ +     
Sbjct: 228 GTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMHGFSQEALQLFKSMCRMGL 287

Query: 308 RVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARK 367
              + T +G+           L+ C HS  +  G              +   N+M+    
Sbjct: 288 HPTNITFIGI-----------LSACGHSGWVTEG--------------WDIFNKMK---- 318

Query: 368 LFDESS-EKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLG 426
             DE   E  +  +  M+    + G  E+A  L + M    + P+PV   ++L AC   G
Sbjct: 319 --DEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMN---IEPDPVLWGTLLGACRLHG 373

Query: 427 AISLGKWVHELVKSRNF-ESNIYVSTALIDMYAKCGN 462
            I+LG+ + EL+  +N   S  Y+   L ++YA  GN
Sbjct: 374 KIALGEKIVELLVDQNLANSGTYI--LLSNIYAAVGN 408



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 49/159 (30%), Positives = 71/159 (44%), Gaps = 32/159 (20%)

Query: 441 RNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVT-------------------- 480
           R    +++  TA+I  +A  G++V A++LFD M  KS V+                    
Sbjct: 87  RTQNPSVFFWTAIIHGHALRGDVVSAQQLFDTMPEKSLVSLTAMLTCYAKHGELDAARVL 146

Query: 481 -----------WNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLV 529
                      WN MI GY  +G   EAL LF  ML +  +P+ VT LSVL AC   G +
Sbjct: 147 FDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGAL 206

Query: 530 REGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKA 568
             G  +  S I ++G +        +VD+  + G LE A
Sbjct: 207 ESGRWV-HSYIENNGIQFNVHVGTALVDMYSKCGSLEDA 244


>gi|224135349|ref|XP_002322051.1| predicted protein [Populus trichocarpa]
 gi|222869047|gb|EEF06178.1| predicted protein [Populus trichocarpa]
          Length = 924

 Score =  474 bits (1221), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 266/757 (35%), Positives = 409/757 (54%), Gaps = 2/757 (0%)

Query: 29  HAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNEMP 88
           H  +I  G   D+     L        A   A  +F  +P+ +L  +N +I  FS N   
Sbjct: 169 HGMVIKMGLVLDVFVGNALVGMYGKCGAVDEAMKVFDFMPETNLVSWNSMICAFSENGFS 228

Query: 89  KSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAA 148
           + S      +     L PD  T   +L   +   +  IG+ +HG A+  G   ++ V  A
Sbjct: 229 RDSFDLLMEMLGEEGLLPDVVTVVTILPVCAGEGEVDIGMGIHGLAVKLGLSEEVMVNNA 288

Query: 149 LVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTW- 207
           +V +Y K  ++  A+  F K   K+ V WN+MIS         ++  +  +M   G    
Sbjct: 289 MVYMYSKCGYLNEAQMSFVKNNNKNVVSWNTMISAFSLEGDVNEAFNLLQEMQIQGEEMK 348

Query: 208 LDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELL 267
            +  ++  VLPA  +  +LR   E+     +  F  HV +    +  Y+KCG +  AE +
Sbjct: 349 ANEVTILNVLPACLDKLQLRSLKELHGYSFRHCFQ-HVELSNAFILAYAKCGALNSAEKV 407

Query: 268 FRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHL 327
           F  I    + S NA+I G+  NG    +L L  Q+  S ++ +  TI  L+        L
Sbjct: 408 FHGIGDKTVSSWNALIGGHAQNGDPRKALHLLFQMTYSGQQPDWFTISSLLLACAHLKSL 467

Query: 328 HLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGY 387
                IH + L++G+ ++  V T+L + Y    +  +AR LFD   +K+L SWNAMI+GY
Sbjct: 468 QYGKEIHGYVLRNGLETDFFVGTSLLSHYIHCGKASSARVLFDRMKDKNLVSWNAMISGY 527

Query: 388 TQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNI 447
           +QNGL  E+++LF++  +  +  + + + S+  AC+QL A+ LGK  H  V       + 
Sbjct: 528 SQNGLPYESLALFRKSLSEGIQSHEIAIVSVFGACSQLSALRLGKEAHGYVLKALQTEDA 587

Query: 448 YVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHS 507
           +V  ++IDMYAK G I E+R++FD +  K+  +WN +I  +G+HGHG EA++L+  M   
Sbjct: 588 FVGCSIIDMYAKSGCIKESRKVFDGLKDKNVASWNAIIVAHGIHGHGKEAIELYERMKKV 647

Query: 508 GIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEK 567
           G  P   T++ +L AC HAGLV EG + F+ M + +  +P  EHYAC++D+L RAG+L+ 
Sbjct: 648 GQMPDRFTYIGILMACGHAGLVEEGLKYFKEMQNFNLIEPKLEHYACLIDMLARAGRLDD 707

Query: 568 ALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSA 627
           AL  +  +  E    +W +LL +C       +    ++KL EL+P+    +VLLSN+Y+ 
Sbjct: 708 ALRLVNEMPEEADNRIWSSLLRSCRTFGALEIGEKVAKKLLELEPDKAENYVLLSNLYAG 767

Query: 628 ERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGK 687
              +     VRQ++K+  L K  GC+ IEVGG  + F  GD L P+S  I  +  +L  +
Sbjct: 768 LGKWDGVRRVRQMMKEIGLQKDAGCSWIEVGGRVYSFVVGDSLQPKSAEIRVIWRRLEER 827

Query: 688 MREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDC 747
           + E G++  T + LH+V EEEK  +++ HSEKLAI+FGL+ T  GT +RI KNLR+C DC
Sbjct: 828 ISEIGYKPNTSSVLHEVGEEEKIDILRGHSEKLAISFGLLKTTKGTTLRIYKNLRICADC 887

Query: 748 HTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           H A K ISK   R IVVRD  RFHHF+ G+CSC DYW
Sbjct: 888 HNAAKLISKAVEREIVVRDNKRFHHFRDGLCSCCDYW 924



 Score =  284 bits (727), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 178/568 (31%), Positives = 287/568 (50%), Gaps = 21/568 (3%)

Query: 37  FQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYT 96
           ++ND    T+L    +   +   +R +F ++   +L  +N ++ G++ N +    +  + 
Sbjct: 75  YRNDYVLNTRLIKMYAMCGSPLDSRLVFDNMETKNLIQWNALVSGYTRNGLYGDVVKVFM 134

Query: 97  HLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKF 156
            L  +T   PDNFT+  V+ A     D  +G ++HG  I  G   D+FVG ALV +Y K 
Sbjct: 135 DLVSDTDFQPDNFTFPSVIKACGGILDVRLGEVIHGMVIKMGLVLDVFVGNALVGMYGKC 194

Query: 157 SWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAV 216
             V  A KVFD MPE + V WNSMI    +N   +DS  +  +M+   G   D  +V  +
Sbjct: 195 GAVDEAMKVFDFMPETNLVSWNSMICAFSENGFSRDSFDLLMEMLGEEGLLPDVVTVVTI 254

Query: 217 LPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDL 276
           LP  A   E+ +GM I  L +KLG  + V V   +V  YSKCG +  A++ F      ++
Sbjct: 255 LPVCAGEGEVDIGMGIHGLAVKLGLSEEVMVNNAMVYMYSKCGYLNEAQMSFVKNNNKNV 314

Query: 277 ISCNAMISGYTCNGKTESSLRLFRQLLASAE--RVNSSTIVGLIPVFYPFGHLHLTNCIH 334
           +S N MIS ++  G    +  L +++    E  + N  TI+ ++P       L     +H
Sbjct: 315 VSWNTMISAFSLEGDVNEAFNLLQEMQIQGEEMKANEVTILNVLPACLDKLQLRSLKELH 374

Query: 335 SF----CLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQN 390
            +    C +   +SN+ +L      Y++   + +A K+F    +K+++SWNA+I G+ QN
Sbjct: 375 GYSFRHCFQHVELSNAFILA-----YAKCGALNSAEKVFHGIGDKTVSSWNALIGGHAQN 429

Query: 391 GLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVS 450
           G   +A+ L  +M  S   P+  T+SS+L ACA L ++  GK +H  V     E++ +V 
Sbjct: 430 GDPRKALHLLFQMTYSGQQPDWFTISSLLLACAHLKSLQYGKEIHGYVLRNGLETDFFVG 489

Query: 451 TALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIR 510
           T+L+  Y  CG    AR LFD M  K+ V+WN MISGY  +G   E+L LF + L  GI+
Sbjct: 490 TSLLSHYIHCGKASSARVLFDRMKDKNLVSWNAMISGYSQNGLPYESLALFRKSLSEGIQ 549

Query: 511 PSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYA----CMVDILGRAGQLE 566
              +  +SV  ACS    +R G E      H +  K L    A     ++D+  ++G ++
Sbjct: 550 SHEIAIVSVFGACSQLSALRLGKE-----AHGYVLKALQTEDAFVGCSIIDMYAKSGCIK 604

Query: 567 KALEFIKGLAVEPGPAVWGALLGACMIH 594
           ++ +   GL  +   A W A++ A  IH
Sbjct: 605 ESRKVFDGLK-DKNVASWNAIIVAHGIH 631



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 50/175 (28%), Positives = 89/175 (50%), Gaps = 4/175 (2%)

Query: 418 ILSACAQLGAISLGKWVHELVKSRNFESNIYV-STALIDMYAKCGNIVEARELFDLMSHK 476
           +L AC     I  G+ +H+ V       N YV +T LI MYA CG+ +++R +FD M  K
Sbjct: 49  LLQACGNQKDIETGRRLHKFVSDSTHYRNDYVLNTRLIKMYAMCGSPLDSRLVFDNMETK 108

Query: 477 SEVTWNTMISGYGLHGHGLEALQLFSEML-HSGIRPSGVTFLSVLYACSHAGLVREGDEI 535
           + + WN ++SGY  +G   + +++F +++  +  +P   TF SV+ AC     VR G E+
Sbjct: 109 NLIQWNALVSGYTRNGLYGDVVKVFMDLVSDTDFQPDNFTFPSVIKACGGILDVRLG-EV 167

Query: 536 FQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGA 590
              M+   G          +V + G+ G +++A++    +  E     W +++ A
Sbjct: 168 IHGMVIKMGLVLDVFVGNALVGMYGKCGAVDEAMKVFDFMP-ETNLVSWNSMICA 221


>gi|357477961|ref|XP_003609266.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355510321|gb|AES91463.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 738

 Score =  474 bits (1220), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 255/579 (44%), Positives = 346/579 (59%), Gaps = 15/579 (2%)

Query: 211 TSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRD 270
           TSV  +  +V E+   RL  +   L   + F       T L++ Y   G ++ A  LF +
Sbjct: 170 TSVIHMYASVGEMDFARLVFDKSSLRDAVSF-------TALITGYVSQGCLDDARRLFDE 222

Query: 271 IVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLH-- 328
           I   D++S NAMISGY  +G+ E ++  F ++  +    N ST+V    V    GH    
Sbjct: 223 IPVKDVVSWNAMISGYVQSGRFEEAIVCFYEMQEANVLPNKSTMV---VVLSACGHTRSG 279

Query: 329 -LTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGY 387
            L   I S+   +G  SN  +  AL  +Y +  E + AR+LFD   EK + SWN MI GY
Sbjct: 280 ELGKWIGSWVRDNGFGSNLQLTNALIDMYCKCGETDIARELFDGIEEKDVISWNTMIGGY 339

Query: 388 TQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELV-KSRNFESN 446
           +   L EEA++LF+ M  S V PN VT   IL ACA LGA+ LGKWVH  + K+    SN
Sbjct: 340 SYLSLYEEALALFEVMLRSNVKPNDVTFLGILHACACLGALDLGKWVHAYIDKNLRNSSN 399

Query: 447 IYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLH 506
             + T+LIDMYAKCG I  A  +F  M  ++  +WN M+SG+ +HGH   AL LFSEM++
Sbjct: 400 ASLWTSLIDMYAKCGCIEAAERVFRSMHSRNLASWNAMLSGFAMHGHAERALALFSEMVN 459

Query: 507 SGI-RPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQL 565
            G+ RP  +TF+ VL AC+ AGLV  G + F+SMI D+G  P  +HY CM+D+L RA + 
Sbjct: 460 KGLFRPDDITFVGVLSACTQAGLVDLGHQYFRSMIQDYGISPKLQHYGCMIDLLARAEKF 519

Query: 566 EKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIY 625
           E+A   +K + +EP  A+WG+LL AC  H         +E+LF+L+PEN G  VLLSNIY
Sbjct: 520 EEAEILMKNMEMEPDGAIWGSLLSACKAHGRVEFGEYVAERLFQLEPENAGAFVLLSNIY 579

Query: 626 SAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLN 685
           +    +   A +R  +  + + K PGCT IE+ G  H F  GD+ HP+   IY ML +++
Sbjct: 580 AGAGRWDDVARIRTRLNDKGMKKVPGCTSIEIDGDVHEFLVGDKFHPECNNIYKMLNEVD 639

Query: 686 GKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCL 745
             + E GF   T   L+D++EE KE  +  HSEKLAI+FGLI T+PGT IRI+KNLRVC 
Sbjct: 640 KLLEENGFVPNTSEVLYDMDEEWKEGALSQHSEKLAISFGLIKTKPGTTIRIVKNLRVCG 699

Query: 746 DCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           +CH+ATK ISK+  R I+ RD NRFHHFK G CSC D W
Sbjct: 700 NCHSATKLISKIFNREIIARDRNRFHHFKDGFCSCNDCW 738



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 146/521 (28%), Positives = 247/521 (47%), Gaps = 42/521 (8%)

Query: 12  FLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAH--RLSDFKATCYARALFFSIP- 68
           +L+LL+  K  +   Q H+ II  G  N +   +KL H   +S      YA +LF     
Sbjct: 31  YLNLLEKCKNINTFKQIHSLIIKTGLNNTVFVQSKLIHFCAVSPSGDLSYALSLFEENQQ 90

Query: 69  --KPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSI 126
             K ++F++N +IRG+S +  P SS+  ++ +     + P++ T+ F+  + +       
Sbjct: 91  HHKHNVFIWNSLIRGYSLSSSPLSSLHLFSRMLY-YGVQPNSHTFPFLFKSCTKAKATHE 149

Query: 127 GVLLHGHA--------------IVSGYGS-----------------DLFVGAALVDLYFK 155
           G  LH HA              ++  Y S                 D     AL+  Y  
Sbjct: 150 GKQLHAHALKLALHFNPHVHTSVIHMYASVGEMDFARLVFDKSSLRDAVSFTALITGYVS 209

Query: 156 FSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAA 215
              +  AR++FD++P KD V WN+MISG +++  F+++I  F +M +      + +++  
Sbjct: 210 QGCLDDARRLFDEIPVKDVVSWNAMISGYVQSGRFEEAIVCFYEM-QEANVLPNKSTMVV 268

Query: 216 VLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPD 275
           VL A    +   LG  I       GF  ++ +   L+  Y KCGE + A  LF  I   D
Sbjct: 269 VLSACGHTRSGELGKWIGSWVRDNGFGSNLQLTNALIDMYCKCGETDIARELFDGIEEKD 328

Query: 276 LISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHS 335
           +IS N MI GY+     E +L LF  +L S  + N  T +G++      G L L   +H+
Sbjct: 329 VISWNTMIGGYSYLSLYEEALALFEVMLRSNVKPNDVTFLGILHACACLGALDLGKWVHA 388

Query: 336 FCLKS-GIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTE 394
           +  K+    SN+S+ T+L  +Y++   +EAA ++F     ++LASWNAM++G+  +G  E
Sbjct: 389 YIDKNLRNSSNASLWTSLIDMYAKCGCIEAAERVFRSMHSRNLASWNAMLSGFAMHGHAE 448

Query: 395 EAISLFQEM-QASKVAPNPVTVSSILSACAQLGAISLG-KWVHELVKSRNFESNIYVSTA 452
            A++LF EM       P+ +T   +LSAC Q G + LG ++   +++       +     
Sbjct: 449 RALALFSEMVNKGLFRPDDITFVGVLSACTQAGLVDLGHQYFRSMIQDYGISPKLQHYGC 508

Query: 453 LIDMYAKCGNIVEARELFDLMSHKSE-VTWNTMISGYGLHG 492
           +ID+ A+     EA  L   M  + +   W +++S    HG
Sbjct: 509 MIDLLARAEKFEEAEILMKNMEMEPDGAIWGSLLSACKAHG 549



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 114/411 (27%), Positives = 184/411 (44%), Gaps = 47/411 (11%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGF-SNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAA 118
           AR LF  IP  D+  +N +I G+  +    ++ +CFY     N  + P+  T   VLSA 
Sbjct: 216 ARRLFDEIPVKDVVSWNAMISGYVQSGRFEEAIVCFYEMQEAN--VLPNKSTMVVVLSAC 273

Query: 119 SACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWN 178
                  +G  +      +G+GS+L +  AL+D+Y K      AR++FD + EKD + WN
Sbjct: 274 GHTRSGELGKWIGSWVRDNGFGSNLQLTNALIDMYCKCGETDIARELFDGIEEKDVISWN 333

Query: 179 SMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQC-LGL 237
           +MI G      +++++ +F  M+R+     D T +  +L A A +  L LG  +   +  
Sbjct: 334 TMIGGYSYLSLYEEALALFEVMLRSNVKPNDVTFL-GILHACACLGALDLGKWVHAYIDK 392

Query: 238 KLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLR 297
            L    +  + T L+  Y+KCG +E AE +FR +   +L S NAM+SG+  +G  E +L 
Sbjct: 393 NLRNSSNASLWTSLIDMYAKCGCIEAAERVFRSMHSRNLASWNAMLSGFAMHGHAERALA 452

Query: 298 LFRQLLASAE-RVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVY 356
           LF +++     R +  T VG++                S C ++G+V        L   Y
Sbjct: 453 LFSEMVNKGLFRPDDITFVGVL----------------SACTQAGLVD-------LGHQY 489

Query: 357 SRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVS 416
            R         + D      L  +  MI    +    EEA  L + M+   + P+     
Sbjct: 490 FR-------SMIQDYGISPKLQHYGCMIDLLARAEKFEEAEILMKNME---MEPDGAIWG 539

Query: 417 SILSACAQLGAISLGKWVHELVKSRNFE--------SNIYVSTALIDMYAK 459
           S+LSAC   G +  G++V E +     E        SNIY      D  A+
Sbjct: 540 SLLSACKAHGRVEFGEYVAERLFQLEPENAGAFVLLSNIYAGAGRWDDVAR 590



 Score = 89.0 bits (219), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 78/298 (26%), Positives = 128/298 (42%), Gaps = 46/298 (15%)

Query: 333 IHSFCLKSGIVSNSSVLTALSTVY----SRLNEMEAARKLFDESSEK---SLASWNAMIA 385
           IHS  +K+G+  N++V      ++    S   ++  A  LF+E+ +    ++  WN++I 
Sbjct: 47  IHSLIIKTGL--NNTVFVQSKLIHFCAVSPSGDLSYALSLFEENQQHHKHNVFIWNSLIR 104

Query: 386 GYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFES 445
           GY+ +     ++ LF  M    V PN  T   +  +C +  A   GK +H          
Sbjct: 105 GYSLSSSPLSSLHLFSRMLYYGVQPNSHTFPFLFKSCTKAKATHEGKQLHAHALKLALHF 164

Query: 446 NIYVSTALIDMYAKCGN-------------------------------IVEARELFDLMS 474
           N +V T++I MYA  G                                + +AR LFD + 
Sbjct: 165 NPHVHTSVIHMYASVGEMDFARLVFDKSSLRDAVSFTALITGYVSQGCLDDARRLFDEIP 224

Query: 475 HKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGD- 533
            K  V+WN MISGY   G   EA+  F EM  + + P+  T + VL AC H    R G+ 
Sbjct: 225 VKDVVSWNAMISGYVQSGRFEEAIVCFYEMQEANVLPNKSTMVVVLSACGH---TRSGEL 281

Query: 534 -EIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGA 590
            +   S + D+GF    +    ++D+  + G+ + A E   G+  E     W  ++G 
Sbjct: 282 GKWIGSWVRDNGFGSNLQLTNALIDMYCKCGETDIARELFDGIE-EKDVISWNTMIGG 338



 Score = 45.8 bits (107), Expect = 0.099,   Method: Compositional matrix adjust.
 Identities = 43/141 (30%), Positives = 68/141 (48%), Gaps = 14/141 (9%)

Query: 417 SILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYA--KCGNIVEARELFD--L 472
           ++L  C  +      K +H L+      + ++V + LI   A    G++  A  LF+   
Sbjct: 33  NLLEKCKNINTF---KQIHSLIIKTGLNNTVFVQSKLIHFCAVSPSGDLSYALSLFEENQ 89

Query: 473 MSHKSEV-TWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVRE 531
             HK  V  WN++I GY L    L +L LFS ML+ G++P+  TF  +  +C+ A    E
Sbjct: 90  QHHKHNVFIWNSLIRGYSLSSSPLSSLHLFSRMLYYGVQPNSHTFPFLFKSCTKAKATHE 149

Query: 532 GDEIFQSMIHDHGFKPLAEHY 552
           G +     +H H  K LA H+
Sbjct: 150 GKQ-----LHAHALK-LALHF 164


>gi|296088012|emb|CBI35295.3| unnamed protein product [Vitis vinifera]
          Length = 645

 Score =  474 bits (1219), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 261/655 (39%), Positives = 366/655 (55%), Gaps = 39/655 (5%)

Query: 130 LHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCC 189
           +H H + +   +D  V   L  LY   + V  AR++FD++P    +LWN +I     N  
Sbjct: 30  IHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPSVILWNQIIRAYAWNGP 89

Query: 190 FQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLT 249
           F  +I ++  M+ + G   +  +   VL A + +  +  G+EI       G    V+V T
Sbjct: 90  FDGAIDLYHSML-HLGVRPNKYTYPFVLKACSGLLAIEDGVEIHSHAKMFGLESDVFVCT 148

Query: 250 GLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERV 309
            LV FY+KCG +  A+ LF  +   D+++ NAMI+G +  G  + +++L  Q+       
Sbjct: 149 ALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGICP 208

Query: 310 NSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLF 369
           NSSTIVG++P                              T    +Y        ARK+F
Sbjct: 209 NSSTIVGVLP------------------------------TCQCLLY--------ARKIF 230

Query: 370 DESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAIS 429
           D    ++  SW+AMI GY  +   +EA+ +F+ MQ S + P+  T+  +L AC+ L A+ 
Sbjct: 231 DVMGVRNEVSWSAMIGGYVASDCMKEALDIFRMMQLSGIDPDLTTMLGVLPACSHLAALQ 290

Query: 430 LGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYG 489
            G   H  +  R F ++  +  ALIDMY+KCG I  ARE+F+ M     V+WN MI GYG
Sbjct: 291 HGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYG 350

Query: 490 LHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLA 549
           +HG G+EAL LF ++L  G++P  +TF+ +L +CSH+GLV EG   F +M  D    P  
Sbjct: 351 IHGLGMEALGLFHDLLALGLKPDDITFICLLSSCSHSGLVMEGRLWFDAMSRDFSIVPRM 410

Query: 550 EHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFE 609
           EH  CMVDILGRAG +++A  FI+ +  EP   +W ALL AC IHK+  L    S+K+  
Sbjct: 411 EHCICMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSACRIHKNIELGEEVSKKIQS 470

Query: 610 LDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQ 669
           L PE+ G  VLLSNIYSA   +  AA +R   K   L K PGC+ IE+ G  H F  GDQ
Sbjct: 471 LGPESTGNFVLLSNIYSAAGRWDDAAHIRITQKDWGLKKIPGCSWIEINGIVHAFVGGDQ 530

Query: 670 LHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIAT 729
            H Q + I   LE+L  +M+  G+Q E      DVEEEEKE ++  HSEKLAIAFG++  
Sbjct: 531 SHLQLSQINRKLEELLVEMKRLGYQAECSFVFQDVEEEEKEQILLYHSEKLAIAFGILNL 590

Query: 730 EPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           + G  I + KNLRVC DCHTA KF++ +T R I VRDANRFHHFK G C+CGD+W
Sbjct: 591 KAGRPILVTKNLRVCGDCHTAIKFMTLITKREITVRDANRFHHFKNGTCNCGDFW 645



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 132/491 (26%), Positives = 229/491 (46%), Gaps = 47/491 (9%)

Query: 7   QSRNLFLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATC----YARA 62
           + +N +L LL+       LT+   +I  H  +N  +  + + H+L+    +C     AR 
Sbjct: 6   EVKNNYLHLLEACIQSKSLTEA-KKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARR 64

Query: 63  LFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACC 122
           LF  IP P + L+N IIR ++ N     +I  Y H   +  + P+ +TY FVL A S   
Sbjct: 65  LFDEIPNPSVILWNQIIRAYAWNGPFDGAIDLY-HSMLHLGVRPNKYTYPFVLKACSGLL 123

Query: 123 DRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMIS 182
               GV +H HA + G  SD+FV  ALVD Y K   +  A+++F  M  +D V WN+MI+
Sbjct: 124 AIEDGVEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIA 183

Query: 183 GLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFH 242
           G        D++ +   M +  G   +S+++  VLP              QCL       
Sbjct: 184 GCSLYGLCDDAVQLIMQM-QEEGICPNSSTIVGVLPTC------------QCL------- 223

Query: 243 DHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQL 302
             +Y                 A  +F  +   + +S +AMI GY  +   + +L +FR +
Sbjct: 224 --LY-----------------ARKIFDVMGVRNEVSWSAMIGGYVASDCMKEALDIFRMM 264

Query: 303 LASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEM 362
             S    + +T++G++P       L    C H + +  G  +++ +  AL  +YS+  ++
Sbjct: 265 QLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKI 324

Query: 363 EAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSAC 422
             AR++F+      + SWNAMI GY  +GL  EA+ LF ++ A  + P+ +T   +LS+C
Sbjct: 325 SFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLLSSC 384

Query: 423 AQLGAISLGK-WVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEV-T 480
           +  G +  G+ W   + +  +    +     ++D+  + G I EA      M  + +V  
Sbjct: 385 SHSGLVMEGRLWFDAMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFEPDVRI 444

Query: 481 WNTMISGYGLH 491
           W+ ++S   +H
Sbjct: 445 WSALLSACRIH 455



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 51/179 (28%), Positives = 85/179 (47%), Gaps = 6/179 (3%)

Query: 418 ILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKS 477
           +L AC Q  +++  K +H+        ++  V   L  +Y  C  +V AR LFD + + S
Sbjct: 14  LLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPS 73

Query: 478 EVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQ 537
            + WN +I  Y  +G    A+ L+  MLH G+RP+  T+  VL ACS    + +G EI  
Sbjct: 74  VILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHS 133

Query: 538 SMIHDHGFKPLAEHYAC--MVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIH 594
              H   F   ++ + C  +VD   + G L +A      ++     A W A++  C ++
Sbjct: 134 ---HAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVA-WNAMIAGCSLY 188


>gi|168048332|ref|XP_001776621.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162672066|gb|EDQ58609.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 703

 Score =  473 bits (1218), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 258/686 (37%), Positives = 381/686 (55%), Gaps = 1/686 (0%)

Query: 99  RKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSW 158
           R    L  D+F Y  VL       D      +H   I S    +  V   L+ +Y +   
Sbjct: 19  RLQRGLITDSFMYVEVLKRCLKQKDLMAAKQVHDCIIKSRMEQNAHVMNNLLHVYIECGR 78

Query: 159 VKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLP 218
           ++ AR VFD + +K    WN+MI+G +++   +D++ +F +M   G    ++ +   +L 
Sbjct: 79  LQEARCVFDALVKKSGASWNAMIAGYVEHKHAEDAMRLFREMCHEG-VQPNAGTYMIILK 137

Query: 219 AVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLIS 278
           A A +  L+ G E+       G    V V T L+  Y KCG +  A  +F +++  D+IS
Sbjct: 138 ACASLSALKWGKEVHACIRHGGLESDVRVGTALLRMYGKCGSINEARRIFDNLMNHDIIS 197

Query: 279 CNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCL 338
              MI  Y  +G  + + RL  Q+     + N+ T V ++      G L     +H   L
Sbjct: 198 WTVMIGAYAQSGNGKEAYRLMLQMEQEGFKPNAITYVSILNACASEGALKWVKRVHRHAL 257

Query: 339 KSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAIS 398
            +G+  +  V TAL  +Y++   ++ AR +FD    + + SWN MI  + ++G   EA  
Sbjct: 258 DAGLELDVRVGTALVQMYAKSGSIDDARVVFDRMKVRDVVSWNVMIGAFAEHGRGHEAYD 317

Query: 399 LFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYA 458
           LF +MQ     P+ +   SIL+ACA  GA+   K +H        E ++ V TAL+ MY+
Sbjct: 318 LFLQMQTEGCKPDAIMFLSILNACASAGALEWVKKIHRHALDSGLEVDVRVGTALVHMYS 377

Query: 459 KCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLS 518
           K G+I +AR +FD M  ++ V+WN MISG   HG G +AL++F  M   G++P  VTF++
Sbjct: 378 KSGSIDDARVVFDRMKVRNVVSWNAMISGLAQHGLGQDALEVFRRMTAHGVKPDRVTFVA 437

Query: 519 VLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVE 578
           VL ACSHAGLV EG   + +M   +G +P   H  CMVD+LGRAG+L +A  FI  +AV+
Sbjct: 438 VLSACSHAGLVDEGRSQYLAMTQVYGIEPDVSHCNCMVDLLGRAGRLMEAKLFIDNMAVD 497

Query: 579 PGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVR 638
           P  A WGALLG+C  + +  L  + +++  +LDP+N   +VLLSNIY+    +   + VR
Sbjct: 498 PDEATWGALLGSCRTYGNVELGELVAKERLKLDPKNAATYVLLSNIYAEAGKWDMVSWVR 557

Query: 639 QVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETV 698
            ++++R + K PG + IEV    H F   D  HP+   I    +K+  K++  G+  +T 
Sbjct: 558 TMMRERGIRKEPGRSWIEVDNKIHDFLVADSSHPECKEINESKDKVIEKIKAEGYIPDTR 617

Query: 699 TALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVT 758
             L +   ++KEL +  HSEKLAI +GL+ T PG  IR+ KNLRVC DCH ATK ISKV 
Sbjct: 618 LVLKNKNMKDKELDICSHSEKLAIVYGLMHTPPGNPIRVFKNLRVCTDCHGATKLISKVE 677

Query: 759 GRVIVVRDANRFHHFKGGVCSCGDYW 784
           GR I+VRDANRFHHFK GVCSCGDYW
Sbjct: 678 GREIIVRDANRFHHFKDGVCSCGDYW 703


>gi|224140095|ref|XP_002323422.1| predicted protein [Populus trichocarpa]
 gi|222868052|gb|EEF05183.1| predicted protein [Populus trichocarpa]
          Length = 574

 Score =  473 bits (1218), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 237/544 (43%), Positives = 348/544 (63%), Gaps = 1/544 (0%)

Query: 241 FHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFR 300
            HD + V   L+   +K  ++  A LLF  +   D +S + MI G+  NG  E   + FR
Sbjct: 32  IHDLI-VANKLLYMCAKHKDLVTAHLLFNKMEERDPVSWSVMIGGFVKNGDYERCFQTFR 90

Query: 301 QLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLN 360
           +L+ +  + ++ ++  +I        L +   IHS  LK+G+  ++ V + L  +Y++  
Sbjct: 91  ELIRAGSKPDNFSLPFVIKACRDTMGLIMGRLIHSTVLKNGLHLDNFVCSTLVDMYAKCG 150

Query: 361 EMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILS 420
            ++ A++LFD   +K L +   MIAGY + G   E+  LF +M+     P+ V + +I++
Sbjct: 151 MIDNAKQLFDRMPKKDLVTRTVMIAGYAECGKPNESWVLFDQMRRDGFVPDKVAMVTIVN 210

Query: 421 ACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVT 480
           ACA+LGA++  + VH+ V +R +  ++ + TA+IDMYAKCG+I  +RE+FD M  K+ ++
Sbjct: 211 ACAKLGAMNKARLVHDYVCARRYSLDVELGTAMIDMYAKCGSIDSSREIFDRMEQKNVIS 270

Query: 481 WNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMI 540
           W+ MI  YG HG G EAL+LF  ML+SGI P+ +TF+S+LYACSHAGLV +G ++F  M 
Sbjct: 271 WSAMIGAYGYHGQGREALELFHMMLNSGIIPNRITFISLLYACSHAGLVDDGLQLFSLMS 330

Query: 541 HDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLA 600
             +G +P  +HY CMVD+LGRAG+L++AL  I+ + VE    +W A LGAC IH+  +LA
Sbjct: 331 VSYGVRPDVKHYTCMVDLLGRAGRLDQALRLIENMEVEKDEGIWCAFLGACRIHRQVDLA 390

Query: 601 RVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGT 660
             A++ L  L  +N G+++LLSNIY+    +   A +R ++ KR+L K PG T IEV   
Sbjct: 391 EKAAKLLLSLQTQNPGHYILLSNIYANAGRWKDVAKIRNLMAKRRLKKIPGYTWIEVDNI 450

Query: 661 PHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKL 720
            + F +GD  H +S  IY ML+ L+ K+  AG+  +T + LHDV+EE K  ++  HSEKL
Sbjct: 451 IYRFGAGDNSHLRSNEIYEMLKSLSQKLESAGYVPDTNSVLHDVDEEVKLGILHAHSEKL 510

Query: 721 AIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSC 780
           AIAFGLIAT  GT IRI KNLRVC DCH+  K +S +T R I+VRDANRFHHFK G+CSC
Sbjct: 511 AIAFGLIATPDGTPIRITKNLRVCGDCHSFCKLVSAITQRDIIVRDANRFHHFKEGICSC 570

Query: 781 GDYW 784
           GDYW
Sbjct: 571 GDYW 574



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 100/364 (27%), Positives = 178/364 (48%), Gaps = 3/364 (0%)

Query: 130 LHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCC 189
           +H     +G   DL V   L+ +  K   + +A  +F+KM E+D V W+ MI G +KN  
Sbjct: 22  VHAQVTTTGIIHDLIVANKLLYMCAKHKDLVTAHLLFNKMEERDPVSWSVMIGGFVKNGD 81

Query: 190 FQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLT 249
           ++     F +++R  G+  D+ S+  V+ A  +   L +G  I    LK G H   +V +
Sbjct: 82  YERCFQTFRELIR-AGSKPDNFSLPFVIKACRDTMGLIMGRLIHSTVLKNGLHLDNFVCS 140

Query: 250 GLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERV 309
            LV  Y+KCG ++ A+ LF  + + DL++   MI+GY   GK   S  LF Q+       
Sbjct: 141 TLVDMYAKCGMIDNAKQLFDRMPKKDLVTRTVMIAGYAECGKPNESWVLFDQMRRDGFVP 200

Query: 310 NSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLF 369
           +   +V ++      G ++    +H +        +  + TA+  +Y++   ++++R++F
Sbjct: 201 DKVAMVTIVNACAKLGAMNKARLVHDYVCARRYSLDVELGTAMIDMYAKCGSIDSSREIF 260

Query: 370 DESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAIS 429
           D   +K++ SW+AMI  Y  +G   EA+ LF  M  S + PN +T  S+L AC+  G + 
Sbjct: 261 DRMEQKNVISWSAMIGAYGYHGQGREALELFHMMLNSGIIPNRITFISLLYACSHAGLVD 320

Query: 430 LGKWVHELVK-SRNFESNIYVSTALIDMYAKCGNIVEARELFDLMS-HKSEVTWNTMISG 487
            G  +  L+  S     ++   T ++D+  + G + +A  L + M   K E  W   +  
Sbjct: 321 DGLQLFSLMSVSYGVRPDVKHYTCMVDLLGRAGRLDQALRLIENMEVEKDEGIWCAFLGA 380

Query: 488 YGLH 491
             +H
Sbjct: 381 CRIH 384



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 121/451 (26%), Positives = 204/451 (45%), Gaps = 41/451 (9%)

Query: 10  NLFLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPK 69
           + F+S L   +   Q+ Q HAQ+   G  +DL    KL +  +  K    A  LF  + +
Sbjct: 4   DFFISTLFKCRNIFQIKQVHAQVTTTGIIHDLIVANKLLYMCAKHKDLVTAHLLFNKMEE 63

Query: 70  PDLFLFNVIIRGF-SNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGV 128
            D   ++V+I GF  N +  +    F   +R  +   PDNF+  FV+ A        +G 
Sbjct: 64  RDPVSWSVMIGGFVKNGDYERCFQTFRELIRAGS--KPDNFSLPFVIKACRDTMGLIMGR 121

Query: 129 LLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNC 188
           L+H   + +G   D FV + LVD+Y K   + +A+++FD+MP+KD V    MI+G  + C
Sbjct: 122 LIHSTVLKNGLHLDNFVCSTLVDMYAKCGMIDNAKQLFDRMPKKDLVTRTVMIAGYAE-C 180

Query: 189 CFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEV---QELRLGMEIQC-----LGLKLG 240
              +  WV  D +R  G   D  ++  ++ A A++    + RL  +  C     L ++LG
Sbjct: 181 GKPNESWVLFDQMRRDGFVPDKVAMVTIVNACAKLGAMNKARLVHDYVCARRYSLDVELG 240

Query: 241 FHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFR 300
                   T ++  Y+KCG ++ +  +F  + + ++IS +AMI  Y  +G+   +L LF 
Sbjct: 241 --------TAMIDMYAKCGSIDSSREIFDRMEQKNVISWSAMIGAYGYHGQGREALELFH 292

Query: 301 QLLASAERVNSSTIVGLIPVFYPFGHLHLT-NCIHSFCLKS---GIVSNSSVLTALSTVY 356
            +L S    N  T + L+   Y   H  L  + +  F L S   G+  +    T +  + 
Sbjct: 293 MMLNSGIIPNRITFISLL---YACSHAGLVDDGLQLFSLMSVSYGVRPDVKHYTCMVDLL 349

Query: 357 SRLNEMEAARKLFDESS-EKSLASWNAMIAG---YTQNGLTEEAISLFQEMQASKVAPNP 412
            R   ++ A +L +    EK    W A +     + Q  L E+A  L   +Q     P  
Sbjct: 350 GRAGRLDQALRLIENMEVEKDEGIWCAFLGACRIHRQVDLAEKAAKLLLSLQTQN--PGH 407

Query: 413 VTVSSILSACAQLGAISLGKWVHELVKSRNF 443
             + S + A A       G+W  ++ K RN 
Sbjct: 408 YILLSNIYANA-------GRW-KDVAKIRNL 430



 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 70/266 (26%), Positives = 128/266 (48%), Gaps = 10/266 (3%)

Query: 333 IHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGL 392
           +H+    +GI+ +  V   L  + ++  ++  A  LF++  E+   SW+ MI G+ +NG 
Sbjct: 22  VHAQVTTTGIIHDLIVANKLLYMCAKHKDLVTAHLLFNKMEERDPVSWSVMIGGFVKNGD 81

Query: 393 TEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTA 452
            E     F+E+  +   P+  ++  ++ AC     + +G+ +H  V       + +V + 
Sbjct: 82  YERCFQTFRELIRAGSKPDNFSLPFVIKACRDTMGLIMGRLIHSTVLKNGLHLDNFVCST 141

Query: 453 LIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPS 512
           L+DMYAKCG I  A++LFD M  K  VT   MI+GY   G   E+  LF +M   G  P 
Sbjct: 142 LVDMYAKCGMIDNAKQLFDRMPKKDLVTRTVMIAGYAECGKPNESWVLFDQMRRDGFVPD 201

Query: 513 GVTFLSVLYACSHAGLVREGDEIFQSMIHDH----GFKPLAEHYACMVDILGRAGQLEKA 568
            V  ++++ AC+  G + +       ++HD+     +    E    M+D+  + G ++ +
Sbjct: 202 KVAMVTIVNACAKLGAMNKA-----RLVHDYVCARRYSLDVELGTAMIDMYAKCGSIDSS 256

Query: 569 LEFIKGLAVEPGPAVWGALLGACMIH 594
            E    +  +     W A++GA   H
Sbjct: 257 REIFDRME-QKNVISWSAMIGAYGYH 281



 Score = 56.2 bits (134), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 42/164 (25%), Positives = 76/164 (46%), Gaps = 10/164 (6%)

Query: 411 NPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELF 470
           +P    S L  C  +  I   K VH  V +     ++ V+  L+ M AK  ++V A  LF
Sbjct: 2   DPDFFISTLFKCRNIFQI---KQVHAQVTTTGIIHDLIVANKLLYMCAKHKDLVTAHLLF 58

Query: 471 DLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHA-GLV 529
           + M  +  V+W+ MI G+  +G      Q F E++ +G +P   +   V+ AC    GL+
Sbjct: 59  NKMEERDPVSWSVMIGGFVKNGDYERCFQTFRELIRAGSKPDNFSLPFVIKACRDTMGLI 118

Query: 530 REGDEIFQSMIHDHGFKPLAEHYAC--MVDILGRAGQLEKALEF 571
                +  S +  +G     +++ C  +VD+  + G ++ A + 
Sbjct: 119 M--GRLIHSTVLKNGLH--LDNFVCSTLVDMYAKCGMIDNAKQL 158


>gi|449520543|ref|XP_004167293.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g68930-like [Cucumis
           sativus]
          Length = 695

 Score =  473 bits (1217), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 250/644 (38%), Positives = 371/644 (57%), Gaps = 37/644 (5%)

Query: 142 DLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMV 201
           D F   AL+  Y K   +++ +  FD+MP +D+V +N+ I+G   N C Q+S+ +F  M 
Sbjct: 88  DXFSWNALLSAYAKSGSIQNLKATFDRMPFRDSVSYNTTIAGFSGNSCPQESLELFKRMQ 147

Query: 202 RNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEV 261
           R G    + T + ++L A A++ +LR G +I    +   F  +V++   L   Y+KCGE+
Sbjct: 148 REGFEPTEYT-IVSILNASAQLLDLRYGKQIHGSIIVRNFLGNVFIWNALTDMYAKCGEI 206

Query: 262 ERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVF 321
           E+A  LF  + + +L+S N MISGY  NG+ E  + L  Q+  S                
Sbjct: 207 EQARWLFDCLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQMRLS---------------- 250

Query: 322 YPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWN 381
              GH+               V+ S+++ A    Y +   ++ AR++F E  EK +  W 
Sbjct: 251 ---GHM------------PDQVTMSTIIAA----YCQCGRVDEARRVFSEFKEKDIVCWT 291

Query: 382 AMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSR 441
           AM+ GY +NG  E+A+ LF EM    + P+  T+SS++S+CA+L ++  G+ VH      
Sbjct: 292 AMMVGYAKNGREEDALLLFNEMLLEHIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSILA 351

Query: 442 NFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLF 501
              +N+ VS+ALIDMY+KCG I +AR +F+LM  ++ V+WN MI G   +GH  +AL+LF
Sbjct: 352 GLNNNLLVSSALIDMYSKCGFIDDARSVFNLMPTRNVVSWNAMIVGCAQNGHDKDALELF 411

Query: 502 SEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGR 561
             ML    +P  VTF+ +L AC H   + +G E F S+ + HG  P  +HYACMV++LGR
Sbjct: 412 ENMLQQKFKPDNVTFIGILSACLHCNWIEQGQEYFDSISNQHGMTPTLDHYACMVNLLGR 471

Query: 562 AGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLL 621
            G++E+A+  IK +A +P   +W  LL  C    D   A VA+  LFELDP     +++L
Sbjct: 472 TGRIEQAVALIKNMAHDPDFLIWSTLLSICSTKGDIVNAEVAARHLFELDPTIAVPYIML 531

Query: 622 SNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAML 681
           SN+Y++   +   A+VR ++K + + K  G + IE+    H FTS D+ HP+S  IY  L
Sbjct: 532 SNMYASMGRWKDVASVRNLMKSKNVKKFAGFSWIEIDNEVHRFTSEDRTHPESEDIYEKL 591

Query: 682 EKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPG-TEIRIIKN 740
             L GK++E GF   T   LHDV E+EK   +  HSEKLA+AFGLI    G + IRIIKN
Sbjct: 592 NMLIGKLQEEGFTPNTNLVLHDVGEDEKFKSICFHSEKLALAFGLIKKPNGISPIRIIKN 651

Query: 741 LRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           +R+C DCH   KF S++ GR I++RD+NRFHHF  G CSC D W
Sbjct: 652 IRICNDCHEFMKFASRIIGRQIILRDSNRFHHFSTGKCSCNDNW 695



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 123/440 (27%), Positives = 205/440 (46%), Gaps = 63/440 (14%)

Query: 61  RALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASA 120
           +A F  +P  D   +N  I GFS N  P+ S+  +  +++     P  +T   +L+A++ 
Sbjct: 109 KATFDRMPFRDSVSYNTTIAGFSGNSCPQESLELFKRMQRE-GFEPTEYTIVSILNASAQ 167

Query: 121 CCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSM 180
             D   G  +HG  IV  +  ++F+  AL D+Y K   ++ AR +FD + +K+ V WN M
Sbjct: 168 LLDLRYGKQIHGSIIVRNFLGNVFIWNALTDMYAKCGEIEQARWLFDCLTKKNLVSWNLM 227

Query: 181 ISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGL--- 237
           ISG  KN                                         G   +C+GL   
Sbjct: 228 ISGYAKN-----------------------------------------GQPEKCIGLLHQ 246

Query: 238 -KLGFH--DHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTES 294
            +L  H  D V  ++ +++ Y +CG V+ A  +F +    D++   AM+ GY  NG+ E 
Sbjct: 247 MRLSGHMPDQV-TMSTIIAAYCQCGRVDEARRVFSEFKEKDIVCWTAMMVGYAKNGREED 305

Query: 295 SLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALST 354
           +L LF ++L      +S T+  ++        LH    +H   + +G+ +N  V +AL  
Sbjct: 306 ALLLFNEMLLEHIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSILAGLNNNLLVSSALID 365

Query: 355 VYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVT 414
           +YS+   ++ AR +F+    +++ SWNAMI G  QNG  ++A+ LF+ M   K  P+ VT
Sbjct: 366 MYSKCGFIDDARSVFNLMPTRNVVSWNAMIVGCAQNGHDKDALELFENMLQQKFKPDNVT 425

Query: 415 VSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYA-------KCGNIVEAR 467
              ILSAC     I  G+   + +      SN +  T  +D YA       + G I +A 
Sbjct: 426 FIGILSACLHCNWIEQGQEYFDSI------SNQHGMTPTLDHYACMVNLLGRTGRIEQAV 479

Query: 468 ELFDLMSHKSE-VTWNTMIS 486
            L   M+H  + + W+T++S
Sbjct: 480 ALIKNMAHDPDFLIWSTLLS 499



 Score = 86.3 bits (212), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 54/227 (23%), Positives = 115/227 (50%), Gaps = 4/227 (1%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           AR +F    + D+  +  ++ G++ N   + ++  +  +     + PD++T S V+S+ +
Sbjct: 275 ARRVFSEFKEKDIVCWTAMMVGYAKNGREEDALLLFNEMLLE-HIEPDSYTLSSVVSSCA 333

Query: 120 ACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNS 179
                  G  +HG +I++G  ++L V +AL+D+Y K  ++  AR VF+ MP ++ V WN+
Sbjct: 334 KLASLHHGQAVHGKSILAGLNNNLLVSSALIDMYSKCGFIDDARSVFNLMPTRNVVSWNA 393

Query: 180 MISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGME-IQCLGLK 238
           MI G  +N   +D++ +F +M++      D+ +   +L A      +  G E    +  +
Sbjct: 394 MIVGCAQNGHDKDALELFENMLQQKFK-PDNVTFIGILSACLHCNWIEQGQEYFDSISNQ 452

Query: 239 LGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVR-PDLISCNAMIS 284
            G    +     +V+   + G +E+A  L +++   PD +  + ++S
Sbjct: 453 HGMTPTLDHYACMVNLLGRTGRIEQAVALIKNMAHDPDFLIWSTLLS 499


>gi|356522365|ref|XP_003529817.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
           chloroplastic-like [Glycine max]
          Length = 882

 Score =  473 bits (1217), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 266/724 (36%), Positives = 412/724 (56%), Gaps = 7/724 (0%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           A  +F  + K +LF +NV++ G++   +   ++  Y H      + PD +T+  VL    
Sbjct: 160 AWYVFGRMEKRNLFSWNVLVGGYAKAGLFDEALDLY-HRMLWVGVKPDVYTFPCVLRTCG 218

Query: 120 ACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNS 179
              +   G  +H H I  G+ SD+ V  AL+ +Y K   V +AR VFDKMP +D + WN+
Sbjct: 219 GMPNLVRGREIHVHVIRYGFESDVDVVNALITMYVKCGDVNTARLVFDKMPNRDRISWNA 278

Query: 180 MISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKL 239
           MISG  +N    + + +FG M++      D  ++ +V+ A   + + RLG +I    L+ 
Sbjct: 279 MISGYFENGVCLEGLRLFGMMIKYPVD-PDLMTMTSVITACELLGDDRLGRQIHGYVLRT 337

Query: 240 GFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLF 299
            F     +   L+  YS  G +E AE +F      DL+S  AMISGY      + +L  +
Sbjct: 338 EFGRDPSIHNSLIPMYSSVGLIEEAETVFSRTECRDLVSWTAMISGYENCLMPQKALETY 397

Query: 300 RQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRL 359
           + + A     +  TI  ++       +L +   +H    + G+VS S V  +L  +Y++ 
Sbjct: 398 KMMEAEGIMPDEITIAIVLSACSCLCNLDMGMNLHEVAKQKGLVSYSIVANSLIDMYAKC 457

Query: 360 NEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSIL 419
             ++ A ++F  + EK++ SW ++I G   N    EA+  F+EM   ++ PN VT+  +L
Sbjct: 458 KCIDKALEIFHSTLEKNIVSWTSIILGLRINNRCFEALFFFREM-IRRLKPNSVTLVCVL 516

Query: 420 SACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEV 479
           SACA++GA++ GK +H          + ++  A++DMY +CG +  A + F  + H  EV
Sbjct: 517 SACARIGALTCGKEIHAHALRTGVSFDGFMPNAILDMYVRCGRMEYAWKQFFSVDH--EV 574

Query: 480 T-WNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQS 538
           T WN +++GY   G G  A +LF  M+ S + P+ VTF+S+L ACS +G+V EG E F S
Sbjct: 575 TSWNILLTGYAERGKGAHATELFQRMVESNVSPNEVTFISILCACSRSGMVAEGLEYFNS 634

Query: 539 MIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTN 598
           M + +   P  +HYAC+VD+LGR+G+LE+A EFI+ + ++P PAVWGALL +C IH    
Sbjct: 635 MKYKYSIMPNLKHYACVVDLLGRSGKLEEAYEFIQKMPMKPDPAVWGALLNSCRIHHHVE 694

Query: 599 LARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVG 658
           L  +A+E +F+ D  +VGY++LLSN+Y+    + + A VR+++++  L   PGC+ +EV 
Sbjct: 695 LGELAAENIFQDDTTSVGYYILLSNLYADNGKWDKVAEVRKMMRQNGLIVDPGCSWVEVK 754

Query: 659 GTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSE 718
           GT H F S D  HPQ   I A+LE+   KM+EAG +    + + D+ E  K  +   HSE
Sbjct: 755 GTVHAFLSSDNFHPQIKEINALLERFYKKMKEAGVEGPESSHM-DIMEASKADIFCGHSE 813

Query: 719 KLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVC 778
           +LAI FGLI + PG  I + KNL +C  CH   KFIS+   R I VRDA +FHHFKGG+C
Sbjct: 814 RLAIVFGLINSGPGMPIWVTKNLYMCQSCHNIVKFISREVRREISVRDAEQFHHFKGGIC 873

Query: 779 SCGD 782
           SC D
Sbjct: 874 SCTD 877



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 66/186 (35%), Positives = 102/186 (54%)

Query: 350 TALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVA 409
            AL +++ R   +  A  +F    +++L SWN ++ GY + GL +EA+ L+  M    V 
Sbjct: 145 NALLSMFVRFGNLVDAWYVFGRMEKRNLFSWNVLVGGYAKAGLFDEALDLYHRMLWVGVK 204

Query: 410 PNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEAREL 469
           P+  T   +L  C  +  +  G+ +H  V    FES++ V  ALI MY KCG++  AR +
Sbjct: 205 PDVYTFPCVLRTCGGMPNLVRGREIHVHVIRYGFESDVDVVNALITMYVKCGDVNTARLV 264

Query: 470 FDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLV 529
           FD M ++  ++WN MISGY  +G  LE L+LF  M+   + P  +T  SV+ AC   G  
Sbjct: 265 FDKMPNRDRISWNAMISGYFENGVCLEGLRLFGMMIKYPVDPDLMTMTSVITACELLGDD 324

Query: 530 REGDEI 535
           R G +I
Sbjct: 325 RLGRQI 330



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 44/178 (24%), Positives = 79/178 (44%), Gaps = 1/178 (0%)

Query: 391 GLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVS 450
           G  + A+S    M   ++        +++  C    A   G  V+  V       ++ + 
Sbjct: 85  GNLDRAMSYLDSMHELRIPVEDDAYVALIRLCEWKRARKEGSRVYSYVSISMSHLSLQLG 144

Query: 451 TALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIR 510
            AL+ M+ + GN+V+A  +F  M  ++  +WN ++ GY   G   EAL L+  ML  G++
Sbjct: 145 NALLSMFVRFGNLVDAWYVFGRMEKRNLFSWNVLVGGYAKAGLFDEALDLYHRMLWVGVK 204

Query: 511 PSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKA 568
           P   TF  VL  C     +  G EI   +I  +GF+   +    ++ +  + G +  A
Sbjct: 205 PDVYTFPCVLRTCGGMPNLVRGREIHVHVIR-YGFESDVDVVNALITMYVKCGDVNTA 261


>gi|147833186|emb|CAN68635.1| hypothetical protein VITISV_030802 [Vitis vinifera]
          Length = 767

 Score =  473 bits (1217), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 280/761 (36%), Positives = 427/761 (56%), Gaps = 47/761 (6%)

Query: 66  SIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRS 125
           SI   D F +N +I   +  + P++++ F+T ++ + A+  +NFT+  +L A +A   R 
Sbjct: 12  SISHKDTFHWNSLI-AKNATQNPQTALTFFTRMQAH-AVPSNNFTFPALLKACAAL--RR 67

Query: 126 IGVLLHGHAIVS--GYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEK--DTVLWNSMI 181
           +   L  HA ++  G  +D F  AALVD Y K      A +VFD+MPE   D V W ++I
Sbjct: 68  LLPTLQVHAYLTRLGLAADRFSAAALVDAYGKCGHAYYAAQVFDEMPEGSVDVVSWTALI 127

Query: 182 SGLMKNCCFQDSIWVFGDMVRNGGTW-------LDSTSVAAVLPAVA---EVQELRLGME 231
           S    N C  ++   FG M    G W       +D  S+ A++ A A       LR G  
Sbjct: 128 SAYSSNGCVDEAFXAFGRMRWMRG-WDGSECCGVDVVSLGALVSACAVGCGSNCLRRGSA 186

Query: 232 IQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIV--RPDLISCNAMISGYTCN 289
           +  L +K GF    ++   +V  YS C +V  A  +F  I   + D++S N++ISG+  N
Sbjct: 187 VHGLVVKYGFGVSTHLGNSMVHMYSACKDVGGAWRVFNGIPIEQRDVVSWNSLISGFXLN 246

Query: 290 GKTESSLRLFRQLLA---SAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSG----I 342
           G+ E +LR F  +++   SA   N  T++ L+      G +  ++ +H +         +
Sbjct: 247 GEAERALRTFEDMVSEGTSAVEPNRVTVIALLKSCAELGCVETSSWVHEYISSRHSSLLV 306

Query: 343 VSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQE 402
             +  VLTAL  +++R   +  AR++FD    K++  W+AMIAGY Q    EEA+ LF++
Sbjct: 307 AKDVVVLTALLDMHARCGNLALAREIFDGVEGKNVVCWSAMIAGYEQGSCPEEALRLFRQ 366

Query: 403 MQAS------KVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDM 456
           M         +V PN VT+ S+++AC++LGA      +H+   +   + +  +++ALIDM
Sbjct: 367 MLMEGNMVGVEVKPNAVTLVSVIAACSRLGASRSASMIHKYAVATGLDQDARIASALIDM 426

Query: 457 YAKCGNIVEARELFDLM--SHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGV 514
            AKCG+I   R++F  M  S ++ V+W++MI   G+HG G  AL+LFSEM   G  P+ +
Sbjct: 427 CAKCGDIEHGRQVFSEMDESTRTVVSWSSMIGAEGIHGEGKRALELFSEMRTGGYEPNEI 486

Query: 515 TFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKG 574
           T++SVL ACSHAGLV +G   F SM  D+G  P  +HYAC+VD+LGRAG L++A   I  
Sbjct: 487 TYISVLSACSHAGLVEQGKSCFNSMEKDYGMSPTGKHYACLVDLLGRAGHLDEAHNVILN 546

Query: 575 LAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQA 634
           + ++   A+WG+LL AC +H +  L  +  +K+  LD  +VG+HVLL+N+Y     +   
Sbjct: 547 MPIKADLALWGSLLAACHLHGNCKLGEIVEKKILSLDSNSVGHHVLLANMYEDAGRWDDV 606

Query: 635 ATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAG-F 693
             +R  +++  L K PG + IE+G   + F + D+ HP+S  IY  L+ L+ ++R+A  +
Sbjct: 607 VRMRVELRRSGLRKIPGQSFIEIGNEVYSFMAEDRSHPESEMIYKELDGLDERVRKAAKY 666

Query: 694 QTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATE----------PGTEIRIIKNLRV 743
            TET   + D +        K HSE+LAIAFGLI  +            T IRI KNLRV
Sbjct: 667 VTETGLNVEDGDIAGLIXRCKYHSERLAIAFGLIMIDRHSTCSCSLRTATPIRITKNLRV 726

Query: 744 CLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           C DCH  TK +SKV  R ++VRDA+RFHHF+ G CSCGDYW
Sbjct: 727 CRDCHAYTKLVSKVIDRELIVRDAHRFHHFRDGFCSCGDYW 767



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 134/475 (28%), Positives = 229/475 (48%), Gaps = 43/475 (9%)

Query: 160 KSARKVFDKMPEKDTVLWNSMISGLMKNCCF--QDSIWVFGDMVRNGGTWLDSTSVAAVL 217
           K+ R     +  KDT  WNS+I+   KN     Q ++  F  M +      ++ +  A+L
Sbjct: 4   KTRRWYXCSISHKDTFHWNSLIA---KNATQNPQTALTFFTRM-QAHAVPSNNFTFPALL 59

Query: 218 PAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRP--D 275
            A A ++ L   +++     +LG     +    LV  Y KCG    A  +F ++     D
Sbjct: 60  KACAALRRLLPTLQVHAYLTRLGLAADRFSAAALVDAYGKCGHAYYAAQVFDEMPEGSVD 119

Query: 276 LISCNAMISGYTCNGKTESSLRLFRQL----------LASAERVNSSTIVGLIPVFYPFG 325
           ++S  A+IS Y+ NG  + +   F ++              + V+   +V    V     
Sbjct: 120 VVSWTALISAYSSNGCVDEAFXAFGRMRWMRGWDGSECCGVDVVSLGALVSACAVGCGSN 179

Query: 326 HLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFD--ESSEKSLASWNAM 383
            L   + +H   +K G   ++ +  ++  +YS   ++  A ++F+     ++ + SWN++
Sbjct: 180 CLRRGSAVHGLVVKYGFGVSTHLGNSMVHMYSACKDVGGAWRVFNGIPIEQRDVVSWNSL 239

Query: 384 IAGYTQNGLTEEAISLFQEMQA---SKVAPNPVTVSSILSACAQLGAISLGKWVHELVKS 440
           I+G+  NG  E A+  F++M +   S V PN VTV ++L +CA+LG +    WVHE + S
Sbjct: 240 ISGFXLNGEAERALRTFEDMVSEGTSAVEPNRVTVIALLKSCAELGCVETSSWVHEYISS 299

Query: 441 RN----FESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLE 496
           R+       ++ V TAL+DM+A+CGN+  ARE+FD +  K+ V W+ MI+GY       E
Sbjct: 300 RHSSLLVAKDVVVLTALLDMHARCGNLALAREIFDGVEGKNVVCWSAMIAGYEQGSCPEE 359

Query: 497 ALQLFSEMLHSG------IRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDH----GFK 546
           AL+LF +ML  G      ++P+ VT +SV+ ACS  G  R       SMIH +    G  
Sbjct: 360 ALRLFRQMLMEGNMVGVEVKPNAVTLVSVIAACSRLGASRSA-----SMIHKYAVATGLD 414

Query: 547 PLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAV-WGALLGACMIHKDTNLA 600
             A   + ++D+  + G +E   +    +       V W +++GA  IH +   A
Sbjct: 415 QDARIASALIDMCAKCGDIEHGRQVFSEMDESTRTVVSWSSMIGAEGIHGEGKRA 469


>gi|326488767|dbj|BAJ97995.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 919

 Score =  473 bits (1217), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 274/780 (35%), Positives = 412/780 (52%), Gaps = 2/780 (0%)

Query: 5   TPQSRNLFLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALF 64
           TP   +  LS    A    Q    HAQ+   G  ++      L      F +   A  +F
Sbjct: 142 TPYVLSSVLSACTKAALFEQGRLVHAQVYKQGSCSETVVGNALIALYLRFGSLSLAERVF 201

Query: 65  FSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDR 124
             +P  D   FN +I   +     +S++  +  +R  +  TPD  T + +L+A ++  D 
Sbjct: 202 SEMPYCDRVTFNTLISRHAQCGNGESALEIFEEMRL-SGWTPDCVTIASLLAACASIGDL 260

Query: 125 SIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGL 184
           + G  LH + + +G   D  +  +L+DLY K   +  A ++F      + VLWN M+   
Sbjct: 261 NKGKQLHSYLLKAGMSPDYIIEGSLLDLYVKCGVIVEALEIFKSGDRTNVVLWNLMLVAY 320

Query: 185 MKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDH 244
            +      S  +F  MV   G   +  +   +L       E+ LG +I  L +K GF   
Sbjct: 321 GQISDLAKSFDLFCQMV-AAGVRPNEFTYPCLLRTCTYAGEINLGEQIHLLSIKTGFESD 379

Query: 245 VYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLA 304
           +YV   L+  YSK G +++A  +   +   D++S  +MI+GY  +   + +L  F+ +  
Sbjct: 380 MYVSGVLIDMYSKYGWLDKARRILEVLEAKDVVSWTSMIAGYVQHEFCKEALETFKDMQL 439

Query: 305 SAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEA 364
                ++  +   I        +     IHS    SG  ++ S+  AL  +Y+R    + 
Sbjct: 440 FGIWPDNIGLASAISACAGIKAMRQGQQIHSRVYVSGYSADVSIWNALVNLYARCGRSKE 499

Query: 365 ARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQ 424
           A  LF+    K   +WN M++G+ Q+GL EEA+ +F +M  + V  N  T  S +SA A 
Sbjct: 500 AFSLFEAIEHKDKITWNGMVSGFAQSGLYEEALEVFIKMYQAGVKYNVFTFVSSISASAN 559

Query: 425 LGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTM 484
           L  I  GK +H  V      S   V+ ALI +Y KCG+I +A+  F  MS ++ V+WNT+
Sbjct: 560 LADIKQGKQIHATVIKTGCTSETEVANALISLYGKCGSIEDAKMQFFEMSERNHVSWNTI 619

Query: 485 ISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHG 544
           I+    HG GLEAL LF +M   G++P+ VTF+ VL ACSH GLV EG   F+SM  +HG
Sbjct: 620 ITSCSQHGWGLEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEGLGYFKSMSSEHG 679

Query: 545 FKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVAS 604
             P  +HYAC+VDILGRAGQL++A +F++ + V     VW  LL AC +HK+  +  +A+
Sbjct: 680 IHPRPDHYACVVDILGRAGQLDRARKFVEEMPVSANAMVWRTLLSACRVHKNIEIGELAA 739

Query: 605 EKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVF 664
           + L EL+P +   +VLLSN Y+    +     VR+++K R + K PG + IEV    H F
Sbjct: 740 KYLLELEPHDSASYVLLSNAYAVTGKWACRDHVRKMMKDRGVRKEPGRSWIEVKNVVHAF 799

Query: 665 TSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAF 724
             GD+LHP +  IY  L  L+ ++ + G+        H+ E+E+K+    VHSEKLA+AF
Sbjct: 800 FVGDRLHPLAHQIYKYLADLDDRLAKIGYIQGNYFLFHEKEKEQKDPTAFVHSEKLAVAF 859

Query: 725 GLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           GL++  P   +R+IKNLRVC DCHT  KF S+V GR IV+RD  RFHHF  G CSCGD+W
Sbjct: 860 GLMSLPPSMPLRVIKNLRVCNDCHTWMKFTSEVMGREIVLRDVYRFHHFNNGNCSCGDFW 919



 Score =  238 bits (607), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 156/567 (27%), Positives = 283/567 (49%), Gaps = 6/567 (1%)

Query: 29  HAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNEMP 88
           HA+ I  G   D      L    +       AR +F  +   D   +  ++ G++ N + 
Sbjct: 65  HAKAITCGLGEDRIAGNLLIDLYAKKGLVQRARRVFEQLSARDNVSWVAMLSGYARNGLG 124

Query: 89  KSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAA 148
           + ++  Y H    + + P  +  S VLSA +       G L+H      G  S+  VG A
Sbjct: 125 EEAVGLY-HQMHCSGVVPTPYVLSSVLSACTKAALFEQGRLVHAQVYKQGSCSETVVGNA 183

Query: 149 LVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWL 208
           L+ LY +F  +  A +VF +MP  D V +N++IS   +    + ++ +F +M  +G T  
Sbjct: 184 LIALYLRFGSLSLAERVFSEMPYCDRVTFNTLISRHAQCGNGESALEIFEEMRLSGWT-P 242

Query: 209 DSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLF 268
           D  ++A++L A A + +L  G ++    LK G      +   L+  Y KCG +  A  +F
Sbjct: 243 DCVTIASLLAACASIGDLNKGKQLHSYLLKAGMSPDYIIEGSLLDLYVKCGVIVEALEIF 302

Query: 269 RDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLH 328
           +   R +++  N M+  Y        S  LF Q++A+  R N  T   L+      G ++
Sbjct: 303 KSGDRTNVVLWNLMLVAYGQISDLAKSFDLFCQMVAAGVRPNEFTYPCLLRTCTYAGEIN 362

Query: 329 LTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYT 388
           L   IH   +K+G  S+  V   L  +YS+   ++ AR++ +    K + SW +MIAGY 
Sbjct: 363 LGEQIHLLSIKTGFESDMYVSGVLIDMYSKYGWLDKARRILEVLEAKDVVSWTSMIAGYV 422

Query: 389 QNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIY 448
           Q+   +EA+  F++MQ   + P+ + ++S +SACA + A+  G+ +H  V    + +++ 
Sbjct: 423 QHEFCKEALETFKDMQLFGIWPDNIGLASAISACAGIKAMRQGQQIHSRVYVSGYSADVS 482

Query: 449 VSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSG 508
           +  AL+++YA+CG   EA  LF+ + HK ++TWN M+SG+   G   EAL++F +M  +G
Sbjct: 483 IWNALVNLYARCGRSKEAFSLFEAIEHKDKITWNGMVSGFAQSGLYEEALEVFIKMYQAG 542

Query: 509 IRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKA 568
           ++ +  TF+S + A ++   +++G +I  ++I   G     E    ++ + G+ G +E A
Sbjct: 543 VKYNVFTFVSSISASANLADIKQGKQIHATVIKT-GCTSETEVANALISLYGKCGSIEDA 601

Query: 569 -LEFIKGLAVEPGPAVWGALLGACMIH 594
            ++F +    E     W  ++ +C  H
Sbjct: 602 KMQFFE--MSERNHVSWNTIITSCSQH 626



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 127/447 (28%), Positives = 223/447 (49%), Gaps = 2/447 (0%)

Query: 129 LLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNC 188
           ++H  AI  G G D   G  L+DLY K   V+ AR+VF+++  +D V W +M+SG  +N 
Sbjct: 63  VIHAKAITCGLGEDRIAGNLLIDLYAKKGLVQRARRVFEQLSARDNVSWVAMLSGYARNG 122

Query: 189 CFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVL 248
             ++++ ++  M    G       +++VL A  +      G  +     K G      V 
Sbjct: 123 LGEEAVGLYHQM-HCSGVVPTPYVLSSVLSACTKAALFEQGRLVHAQVYKQGSCSETVVG 181

Query: 249 TGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAER 308
             L++ Y + G +  AE +F ++   D ++ N +IS +   G  ES+L +F ++  S   
Sbjct: 182 NALIALYLRFGSLSLAERVFSEMPYCDRVTFNTLISRHAQCGNGESALEIFEEMRLSGWT 241

Query: 309 VNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKL 368
            +  TI  L+      G L+    +HS+ LK+G+  +  +  +L  +Y +   +  A ++
Sbjct: 242 PDCVTIASLLAACASIGDLNKGKQLHSYLLKAGMSPDYIIEGSLLDLYVKCGVIVEALEI 301

Query: 369 FDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAI 428
           F      ++  WN M+  Y Q     ++  LF +M A+ V PN  T   +L  C   G I
Sbjct: 302 FKSGDRTNVVLWNLMLVAYGQISDLAKSFDLFCQMVAAGVRPNEFTYPCLLRTCTYAGEI 361

Query: 429 SLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGY 488
           +LG+ +H L     FES++YVS  LIDMY+K G + +AR + +++  K  V+W +MI+GY
Sbjct: 362 NLGEQIHLLSIKTGFESDMYVSGVLIDMYSKYGWLDKARRILEVLEAKDVVSWTSMIAGY 421

Query: 489 GLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPL 548
             H    EAL+ F +M   GI P  +   S + AC+    +R+G +I  S ++  G+   
Sbjct: 422 VQHEFCKEALETFKDMQLFGIWPDNIGLASAISACAGIKAMRQGQQI-HSRVYVSGYSAD 480

Query: 549 AEHYACMVDILGRAGQLEKALEFIKGL 575
              +  +V++  R G+ ++A    + +
Sbjct: 481 VSIWNALVNLYARCGRSKEAFSLFEAI 507



 Score =  138 bits (348), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 92/304 (30%), Positives = 149/304 (49%), Gaps = 2/304 (0%)

Query: 271 IVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIV-GLIPVFYPFGHLHL 329
           + R    S N  ++G+  +   E  L LF   +     + S      L        H  L
Sbjct: 1   MTRRAAASLNKSLTGFLAHEDPEKLLSLFAAKVRQCRGLGSVDFACALRECRGSVKHWPL 60

Query: 330 TNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQ 389
              IH+  +  G+  +      L  +Y++   ++ AR++F++ S +   SW AM++GY +
Sbjct: 61  VPVIHAKAITCGLGEDRIAGNLLIDLYAKKGLVQRARRVFEQLSARDNVSWVAMLSGYAR 120

Query: 390 NGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYV 449
           NGL EEA+ L+ +M  S V P P  +SS+LSAC +      G+ VH  V  +   S   V
Sbjct: 121 NGLGEEAVGLYHQMHCSGVVPTPYVLSSVLSACTKAALFEQGRLVHAQVYKQGSCSETVV 180

Query: 450 STALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGI 509
             ALI +Y + G++  A  +F  M +   VT+NT+IS +   G+G  AL++F EM  SG 
Sbjct: 181 GNALIALYLRFGSLSLAERVFSEMPYCDRVTFNTLISRHAQCGNGESALEIFEEMRLSGW 240

Query: 510 RPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKAL 569
            P  VT  S+L AC+  G + +G ++  S +   G  P       ++D+  + G + +AL
Sbjct: 241 TPDCVTIASLLAACASIGDLNKGKQL-HSYLLKAGMSPDYIIEGSLLDLYVKCGVIVEAL 299

Query: 570 EFIK 573
           E  K
Sbjct: 300 EIFK 303


>gi|413944176|gb|AFW76825.1| putative pentatricopeptide repeat family protein [Zea mays]
          Length = 823

 Score =  473 bits (1216), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 273/761 (35%), Positives = 415/761 (54%), Gaps = 8/761 (1%)

Query: 28  THAQIIIHGFQNDLSTVTKLAHRLSDFKAT----CYARALFFSIPKPDLFLFNVIIRGFS 83
            HA+++  G    L T    A+ L +F A       AR LF  +P+ +   F  +++G++
Sbjct: 67  VHARVVQRGGVAQLDTFC--ANVLLNFYAKLGPLATARRLFDGMPERNRVSFVTLMQGYA 124

Query: 84  NNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDL 143
                + ++  +  L++      ++F  + +L          +   +H  A   G+  + 
Sbjct: 125 LRGEFEEALELFRRLQRE-GHEVNHFVLTTILKVLVTMDAPGLACGIHACACKLGHDRNA 183

Query: 144 FVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRN 203
           FVG AL+D Y     V  AR VFD +  KD V W +M+S   +N   + ++  F  M R 
Sbjct: 184 FVGTALIDAYSLCGAVCHARCVFDGIVGKDAVTWTAMVSCYSENDIPEYALNTFSKM-RM 242

Query: 204 GGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVER 263
            G   +   + + L A   +    LG  I    +K  +    +V   L+  Y+KCG++E 
Sbjct: 243 TGFKPNPFVLTSALKAAVCLSSALLGKGIHGCSVKTLYDTEPHVGGALLDMYAKCGDIED 302

Query: 264 AELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYP 323
           A  +F  I   D+I  + +IS Y  + + E +  +F +++ S    N  ++ G++     
Sbjct: 303 AHAIFEMIPHDDVILWSFLISRYAQSCQNEQAFEMFLRMMRSFVVPNEFSLSGVLQACAN 362

Query: 324 FGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAM 383
              L L   IH+  +K G  S   V  AL  +Y++   ME + ++F    + +  SWN +
Sbjct: 363 IAFLELGEQIHNLAIKLGYESELFVGNALMDMYAKCRNMENSLEIFSSLQDANEVSWNTI 422

Query: 384 IAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNF 443
           I GY Q+G  E+A+S+F EM+A+ +    VT SS+L ACA   +I     +H L++   F
Sbjct: 423 IVGYCQSGFAEDALSVFHEMRAAHMLSTQVTFSSVLRACANTSSIKHAVQIHSLIEKSTF 482

Query: 444 ESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSE 503
            ++  V  +LID YAKCG I +A ++F+ +     V+WN++IS Y LHG    AL+LF  
Sbjct: 483 NNDTIVCNSLIDTYAKCGFIRDALKVFESIVECDVVSWNSIISAYALHGRATNALELFDR 542

Query: 504 MLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAG 563
           M  S I+ + VTF+S+L  C   GLV +G  +F SM+ DH  KP  EHY C+V +LGRAG
Sbjct: 543 MNKSDIKANDVTFVSLLSVCGSTGLVNQGLWLFNSMMMDHRIKPSMEHYTCIVRLLGRAG 602

Query: 564 QLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSN 623
           +L  AL+FI  +   P P VW ALL +C++HK+  L R A+EK+ +++P +   +VLLSN
Sbjct: 603 RLTDALKFIGDIPSTPSPMVWRALLSSCVVHKNVALGRYAAEKVLDIEPHDETTYVLLSN 662

Query: 624 IYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEK 683
           +Y+A     + A  R+ ++   + K  G + +E+ G  H F+ G   HP    I AMLE 
Sbjct: 663 MYAAAGILDEVALWRKSMRNVGVKKEAGLSWVEIKGEVHAFSVGSADHPDMRIINAMLEW 722

Query: 684 LNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRV 743
           LN K    G+  +    LHDV+EEEK  M+ VHSE+LA+A+GL  T PG  IRI+KNLR 
Sbjct: 723 LNLKASREGYVPDINVVLHDVDEEEKARMLWVHSERLALAYGLSMTPPGHPIRIMKNLRS 782

Query: 744 CLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           CLDCHT  K ISK+  R I+VRD NRFHHF+ G+CSCGDYW
Sbjct: 783 CLDCHTMFKVISKIVQREIIVRDINRFHHFEEGICSCGDYW 823


>gi|359475985|ref|XP_002281998.2| PREDICTED: pentatricopeptide repeat-containing protein At4g33170
            [Vitis vinifera]
          Length = 1580

 Score =  473 bits (1216), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 271/732 (37%), Positives = 411/732 (56%), Gaps = 5/732 (0%)

Query: 55   KATCYARALFFSIPKPDLFLFNVIIRG-FSNNEMPKSSICFYTHLRKNTALTPDNFTYSF 113
            +   YA  L  S   PD+F +N  +       +   +  CF      N  +  D  T   
Sbjct: 852  QVQAYAAKLSLSDDNPDVFCWNKKLSECLWAGDNWGAIECFVNMNGLN--IDYDAVTLLV 909

Query: 114  VLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKD 173
            VL+A +   D  +G  +HG A+ SG  SD+ V  +LV++Y K      AR+VF+ M   D
Sbjct: 910  VLAAVAGTDDLELGKQVHGIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREVFNDMKHLD 969

Query: 174  TVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAE-VQELRLGMEI 232
             + WNSMIS   ++   ++S+ +F D++  G    D  ++A+VL A +  +  L +  +I
Sbjct: 970  LISWNSMISSCAQSSLEEESVNLFIDLLHEG-LKPDHFTLASVLRACSSLIDGLNISRQI 1028

Query: 233  QCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKT 292
                LK G     +V T L+  YSK G++E AE LF++    DL   NAM+ GY      
Sbjct: 1029 HVHALKTGNIADSFVATTLIDVYSKSGKMEEAEFLFQNKDDLDLACWNAMMFGYIIGNDG 1088

Query: 293  ESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTAL 352
            + +L LF  +  S E+ +  T+            L     IH+  +K+G  S+  V + +
Sbjct: 1089 KKALELFSLIHKSGEKSDQITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGI 1148

Query: 353  STVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNP 412
              +Y +  +M  A  +F+  S     +W +MI+G   NG  ++A+ ++  M+ S+V P+ 
Sbjct: 1149 LDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDE 1208

Query: 413  VTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDL 472
             T ++++ A + + A+  G+ +H  V   +  S+ +V T+L+DMYAKCGNI +A  LF  
Sbjct: 1209 YTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKK 1268

Query: 473  MSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREG 532
            M+ ++   WN M+ G   HG+  EA+ LF  M   GI P  V+F+ +L ACSHAGL  E 
Sbjct: 1269 MNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSHAGLTSEA 1328

Query: 533  DEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACM 592
             E   SM +D+G +P  EHY+C+VD LGRAG +++A + I+ +  +   ++  ALLGAC 
Sbjct: 1329 YEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKASASINRALLGACR 1388

Query: 593  IHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGC 652
            I  D    +  + +LF L+P +   +VLLSNIY+A   +      R+++K++ + K PG 
Sbjct: 1389 IQGDVETGKRVAARLFALEPFDSAAYVLLSNIYAAANRWDDVTDARKMMKRKNVKKDPGF 1448

Query: 653  TLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELM 712
            + I+V    H+F   D+ HPQ+  IY  +E++   +RE G+  +T   L DVE+EEKE  
Sbjct: 1449 SWIDVKNMLHLFVVDDRSHPQADIIYDKVEEMMKTIREDGYVPDTEFVLLDVEDEEKERS 1508

Query: 713  MKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHH 772
            +  HSEKLAIA+GLI+T   T IR+IKNLRVC DCH A K+ISKV  R IV+RDANRFHH
Sbjct: 1509 LYYHSEKLAIAYGLISTPASTTIRVIKNLRVCGDCHNAIKYISKVFEREIVLRDANRFHH 1568

Query: 773  FKGGVCSCGDYW 784
            F+ GVCSCGDYW
Sbjct: 1569 FRDGVCSCGDYW 1580



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 127/463 (27%), Positives = 230/463 (49%), Gaps = 4/463 (0%)

Query: 27   QTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNE 86
            Q H   +  G  +D+S    L +  S      +AR +F  +   DL  +N +I   + + 
Sbjct: 925  QVHGIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREVFNDMKHLDLISWNSMISSCAQSS 984

Query: 87   MPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDR-SIGVLLHGHAIVSGYGSDLFV 145
            + + S+  +  L  +  L PD+FT + VL A S+  D  +I   +H HA+ +G  +D FV
Sbjct: 985  LEEESVNLFIDLL-HEGLKPDHFTLASVLRACSSLIDGLNISRQIHVHALKTGNIADSFV 1043

Query: 146  GAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGG 205
               L+D+Y K   ++ A  +F    + D   WN+M+ G +     + ++ +F  ++   G
Sbjct: 1044 ATTLIDVYSKSGKMEEAEFLFQNKDDLDLACWNAMMFGYIIGNDGKKALELFS-LIHKSG 1102

Query: 206  TWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAE 265
               D  ++A    A   +  L  G +I    +K GF   ++V +G++  Y KCG++  A 
Sbjct: 1103 EKSDQITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGILDMYIKCGDMVNAG 1162

Query: 266  LLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFG 325
            ++F  I  PD ++  +MISG   NG  + +LR++ ++  S    +  T   LI       
Sbjct: 1163 IVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKASSCVT 1222

Query: 326  HLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIA 385
             L     +H+  +K   VS+  V T+L  +Y++   +E A +LF + + +++A WNAM+ 
Sbjct: 1223 ALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMNVRNIALWNAMLV 1282

Query: 386  GYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLG-KWVHELVKSRNFE 444
            G  Q+G  EEA++LF+ M++  + P+ V+   ILSAC+  G  S   +++H +      E
Sbjct: 1283 GLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSHAGLTSEAYEYLHSMPNDYGIE 1342

Query: 445  SNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISG 487
              I   + L+D   + G + EA ++ + M  K+  + N  + G
Sbjct: 1343 PEIEHYSCLVDALGRAGLVQEADKVIETMPFKASASINRALLG 1385



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 154/585 (26%), Positives = 269/585 (45%), Gaps = 47/585 (8%)

Query: 28   THAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGF----- 82
            THA+I++ G   D      L    S   +   AR +F + P+ DL  +N I+  +     
Sbjct: 643  THARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERDLVTWNAILGAYAASVD 702

Query: 83   SNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAA--SACCDRSIGVLLHGHAIVSGYG 140
            SN+   +  +  +  LR +   T    T + VL     S C   + GV  HG+AI  G  
Sbjct: 703  SNDGNAQEGLHLFRLLRASLGSTT-RMTLAPVLKLCLNSGCLWAAEGV--HGYAIKIGLE 759

Query: 141  SDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDM 200
             D+FV  ALV++Y K   ++ AR +FD M E+D VLWN M+ G ++    +++  +F + 
Sbjct: 760  WDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQLGLEKEAFQLFSEF 819

Query: 201  VRNGGTWLDSTSVAAVLPAVAEV---QELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSK 257
             R+ G   D  SV  +L  V+EV   +   L  ++Q    KL   D              
Sbjct: 820  HRS-GLRPDEFSVQLILNGVSEVNWDEGKWLADQVQAYAAKLSLSDD------------- 865

Query: 258  CGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGL 317
                            PD+   N  +S     G    ++  F  +       ++ T++ +
Sbjct: 866  ---------------NPDVFCWNKKLSECLWAGDNWGAIECFVNMNGLNIDYDAVTLLVV 910

Query: 318  IPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSL 377
            +        L L   +H   +KSG+ S+ SV  +L  +YS++     AR++F++     L
Sbjct: 911  LAAVAGTDDLELGKQVHGIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREVFNDMKHLDL 970

Query: 378  ASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQL-GAISLGKWVH- 435
             SWN+MI+   Q+ L EE+++LF ++    + P+  T++S+L AC+ L   +++ + +H 
Sbjct: 971  ISWNSMISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLASVLRACSSLIDGLNISRQIHV 1030

Query: 436  ELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGL 495
              +K+ N  ++ +V+T LID+Y+K G + EA  LF          WN M+ GY +   G 
Sbjct: 1031 HALKTGNI-ADSFVATTLIDVYSKSGKMEEAEFLFQNKDDLDLACWNAMMFGYIIGNDGK 1089

Query: 496  EALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACM 555
            +AL+LFS +  SG +   +T  +   AC    L+ +G +I    I   GF       + +
Sbjct: 1090 KALELFSLIHKSGEKSDQITLATAAKACGCLVLLDQGKQIHAHAIK-AGFDSDLHVNSGI 1148

Query: 556  VDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLA 600
            +D+  + G +  A   +      P    W +++  C+ + + + A
Sbjct: 1149 LDMYIKCGDMVNA-GIVFNYISAPDDVAWTSMISGCVDNGNEDQA 1192



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 132/489 (26%), Positives = 219/489 (44%), Gaps = 58/489 (11%)

Query: 126  IGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLM 185
            +G   H   +VSG   D F+   L+ +Y K   + SAR+VFD  PE+D V WN+++    
Sbjct: 639  LGKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERDLVTWNAILGAYA 698

Query: 186  KNCCFQDSIWVFG-DMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCL--------- 235
             +    D     G  + R     L ST+   + P       L+L +   CL         
Sbjct: 699  ASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPV------LKLCLNSGCLWAAEGVHGY 752

Query: 236  GLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESS 295
             +K+G    V+V   LV+ YSKCG +  A LLF  +   D++  N M+ GY   G  + +
Sbjct: 753  AIKIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQLGLEKEA 812

Query: 296  LRLFRQLLASAERVNSSTIV----GLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTA 351
             +LF +   S  R +  ++     G+  V +  G   L + + ++               
Sbjct: 813  FQLFSEFHRSGLRPDEFSVQLILNGVSEVNWDEGKW-LADQVQAY--------------- 856

Query: 352  LSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPN 411
                         A KL        +  WN  ++     G    AI  F  M    +  +
Sbjct: 857  -------------AAKLSLSDDNPDVFCWNKKLSECLWAGDNWGAIECFVNMNGLNIDYD 903

Query: 412  PVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFD 471
             VT+  +L+A A    + LGK VH +      +S++ V+ +L++MY+K G    ARE+F+
Sbjct: 904  AVTLLVVLAAVAGTDDLELGKQVHGIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREVFN 963

Query: 472  LMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVRE 531
             M H   ++WN+MIS         E++ LF ++LH G++P   T  SVL ACS    + +
Sbjct: 964  DMKHLDLISWNSMISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLASVLRACSS---LID 1020

Query: 532  GDEIFQSMIHDHGFKP--LAEHYAC--MVDILGRAGQLEKALEFIKGLAVEPGPAVWGAL 587
            G  I +  IH H  K   +A+ +    ++D+  ++G++E+A EF+     +   A W A+
Sbjct: 1021 GLNISR-QIHVHALKTGNIADSFVATTLIDVYSKSGKMEEA-EFLFQNKDDLDLACWNAM 1078

Query: 588  LGACMIHKD 596
            +   +I  D
Sbjct: 1079 MFGYIIGND 1087



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 67/204 (32%), Positives = 111/204 (54%), Gaps = 5/204 (2%)

Query: 326 HLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIA 385
           +L L  C H+  + SG   +  +   L T+YS+   + +AR++FD + E+ L +WNA++ 
Sbjct: 636 NLLLGKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERDLVTWNAILG 695

Query: 386 GY-----TQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKS 440
            Y     + +G  +E + LF+ ++AS  +   +T++ +L  C   G +   + VH     
Sbjct: 696 AYAASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAAEGVHGYAIK 755

Query: 441 RNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQL 500
              E +++VS AL+++Y+KCG + +AR LFD M  +  V WN M+ GY   G   EA QL
Sbjct: 756 IGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQLGLEKEAFQL 815

Query: 501 FSEMLHSGIRPSGVTFLSVLYACS 524
           FSE   SG+RP   +   +L   S
Sbjct: 816 FSEFHRSGLRPDEFSVQLILNGVS 839


>gi|188509964|gb|ACD56648.1| putative pentatricopeptide repeat protein [Gossypioides kirkii]
          Length = 805

 Score =  473 bits (1216), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 241/626 (38%), Positives = 369/626 (58%), Gaps = 23/626 (3%)

Query: 160 KSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPA 219
           +SA ++FDK+ ++D + WNSMISG + N   +  + ++  M+  G   +D  ++ +VL  
Sbjct: 202 ESASELFDKLCDRDVISWNSMISGYVSNGLTERGLEIYKQMMYLGID-VDLATIISVLVG 260

Query: 220 VAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISC 279
            A    L LG  +  L +K  F   +     L+  YSKCG+++ A  +F  +   +++S 
Sbjct: 261 CANSGTLSLGKAVHSLAIKSTFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSW 320

Query: 280 NAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLK 339
            +MI+GYT +G+++ ++RL +Q+     +++      ++      G L     +H +   
Sbjct: 321 TSMIAGYTRDGRSDGAIRLLQQMEKEGVKLDVVATTSILHACARSGSLDNGKDVHDYIKA 380

Query: 340 SGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISL 399
           + + SN  V  AL  +Y++   M+ A  +F     K + SWN MI               
Sbjct: 381 NNMESNLFVCNALMDMYTKCGSMDGANSVFSTMVVKDIISWNTMIG-------------- 426

Query: 400 FQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAK 459
                  ++ P+  T++ IL ACA L A+  GK +H  +    + S+ +V+ AL+D+Y K
Sbjct: 427 -------ELKPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVK 479

Query: 460 CGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSV 519
           CG +  AR LFD++  K  V+W  MISGYG+HG+G EA+  F+EM  +GI P  V+F+S+
Sbjct: 480 CGVLGLARLLFDMIPSKDLVSWTVMISGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISI 539

Query: 520 LYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEP 579
           LYACSH+GL+ +G   F  M +D   +P  EHYACMVD+L R G L KA EFI+ L + P
Sbjct: 540 LYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFIETLPIAP 599

Query: 580 GPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQ 639
              +WGALL  C I+ D  LA   +E++FEL+PEN GY+VLL+NIY+    + +   +R+
Sbjct: 600 DATIWGALLCGCRIYHDIELAEKVAERVFELEPENTGYYVLLANIYAEAEKWEEVKRMRE 659

Query: 640 VVKKRKLAKAPGCTLIEVGGTPHVFTSGDQ-LHPQSTAIYAMLEKLNGKMREAGFQTETV 698
            + K+ L K PGC+ IE+ G  ++F SG+   HP S  I ++L+K+  KM+E G+  +T 
Sbjct: 660 KIGKKGLRKNPGCSWIEIKGKVNLFVSGNNSSHPHSKKIESLLKKMRRKMKEEGYFPKTK 719

Query: 699 TALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVT 758
            AL + +E +KE+ +  HSEKLA+AFGL+A  P   +R+ KNLRVC DCH   KF+SK T
Sbjct: 720 YALINADEMQKEMALCGHSEKLAMAFGLLALPPRKTVRVTKNLRVCGDCHEMAKFMSKET 779

Query: 759 GRVIVVRDANRFHHFKGGVCSCGDYW 784
            R IV+RD+NRFHHFK G CSC  +W
Sbjct: 780 RREIVLRDSNRFHHFKNGYCSCRGFW 805



 Score =  172 bits (436), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 117/375 (31%), Positives = 188/375 (50%), Gaps = 50/375 (13%)

Query: 219 AVAEVQELRL-GMEIQCLGLKLGFH-------DHVYVLTGLVSFYSKCGEVERAELLFRD 270
           AV EV  L+L  +   C  LK G          +VY+   +VS Y+K G+ + +  LF+ 
Sbjct: 131 AVDEVLGLKLVSLYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKI 190

Query: 271 IV-------RP-------------DLISCNAMISGYTCNGKTESSLRLFRQLLASAERVN 310
           +V       RP             D+IS N+MISGY  NG TE  L +++Q++     V+
Sbjct: 191 MVEKGIEGKRPESASELFDKLCDRDVISWNSMISGYVSNGLTERGLEIYKQMMYLGIDVD 250

Query: 311 SSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFD 370
            +TI+ ++      G L L   +HS  +KS      +    L  +YS+  +++ A ++F+
Sbjct: 251 LATIISVLVGCANSGTLSLGKAVHSLAIKSTFERRINFSNTLLDMYSKCGDLDGALRVFE 310

Query: 371 ESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISL 430
           +  E+++ SW +MIAGYT++G ++ AI L Q+M+   V  + V  +SIL ACA+ G++  
Sbjct: 311 KMGERNVVSWTSMIAGYTRDGRSDGAIRLLQQMEKEGVKLDVVATTSILHACARSGSLDN 370

Query: 431 GKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGL 490
           GK VH+ +K+ N ESN++V  AL+DMY KCG++  A  +F  M  K  ++WNTMI     
Sbjct: 371 GKDVHDYIKANNMESNLFVCNALMDMYTKCGSMDGANSVFSTMVVKDIISWNTMI----- 425

Query: 491 HGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAE 550
                             ++P   T   +L AC+    +  G EI    I  +G+     
Sbjct: 426 ----------------GELKPDSRTMACILPACASLSALERGKEI-HGYILRNGYSSDRH 468

Query: 551 HYACMVDILGRAGQL 565
               +VD+  + G L
Sbjct: 469 VANALVDLYVKCGVL 483



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 127/507 (25%), Positives = 227/507 (44%), Gaps = 35/507 (6%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           A  LF  +   D+  +N +I G+ +N + +  +  Y  +     +  D  T   VL   +
Sbjct: 204 ASELFDKLCDRDVISWNSMISGYVSNGLTERGLEIYKQMMY-LGIDVDLATIISVLVGCA 262

Query: 120 ACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNS 179
                S+G  +H  AI S +   +     L+D+Y K   +  A +VF+KM E++ V W S
Sbjct: 263 NSGTLSLGKAVHSLAIKSTFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTS 322

Query: 180 MISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKL 239
           MI+G  ++     +I +   M +  G  LD  +  ++L A A    L  G ++       
Sbjct: 323 MIAGYTRDGRSDGAIRLLQQMEKE-GVKLDVVATTSILHACARSGSLDNGKDVHDYIKAN 381

Query: 240 GFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLF 299
               +++V   L+  Y+KCG ++ A  +F  +V  D+IS N MI                
Sbjct: 382 NMESNLFVCNALMDMYTKCGSMDGANSVFSTMVVKDIISWNTMIGEL------------- 428

Query: 300 RQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRL 359
                   + +S T+  ++P       L     IH + L++G  S+  V  AL  +Y + 
Sbjct: 429 --------KPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKC 480

Query: 360 NEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSIL 419
             +  AR LFD    K L SW  MI+GY  +G   EAI+ F EM+ + + P+ V+  SIL
Sbjct: 481 GVLGLARLLFDMIPSKDLVSWTVMISGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISIL 540

Query: 420 SACAQLGAISLG-KWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSE 478
            AC+  G +  G ++ + +    N E  +     ++D+ ++ GN+ +A E  + +    +
Sbjct: 541 YACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFIETLPIAPD 600

Query: 479 VT-WNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGD--EI 535
            T W  ++ G  ++ H +E  +  +E +   + P    +  +L     A +  E +  E 
Sbjct: 601 ATIWGALLCGCRIY-HDIELAEKVAERVFE-LEPENTGYYVLL-----ANIYAEAEKWEE 653

Query: 536 FQSMIHDHGFKPLAEHYAC-MVDILGR 561
            + M    G K L ++  C  ++I G+
Sbjct: 654 VKRMREKIGKKGLRKNPGCSWIEIKGK 680



 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 103/430 (23%), Positives = 182/430 (42%), Gaps = 78/430 (18%)

Query: 333 IHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMI-------- 384
           +HS    + +  +  +   L ++Y+   +++  R++FD   +K++  WN M+        
Sbjct: 121 VHSIIKSNNVAVDEVLGLKLVSLYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGD 180

Query: 385 -------------------------------------------AGYTQNGLTEEAISLFQ 401
                                                      +GY  NGLTE  + +++
Sbjct: 181 FKESICLFKIMVEKGIEGKRPESASELFDKLCDRDVISWNSMISGYVSNGLTERGLEIYK 240

Query: 402 EMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCG 461
           +M    +  +  T+ S+L  CA  G +SLGK VH L     FE  I  S  L+DMY+KCG
Sbjct: 241 QMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSTFERRINFSNTLLDMYSKCG 300

Query: 462 NIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLY 521
           ++  A  +F+ M  ++ V+W +MI+GY   G    A++L  +M   G++   V   S+L+
Sbjct: 301 DLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIRLLQQMEKEGVKLDVVATTSILH 360

Query: 522 ACSHAGLVREGDEIFQSMIHDHGFKPLAEHYAC--MVDILGRAGQLEKALEFIKGLAVEP 579
           AC+ +G +  G ++   +  ++    L   + C  ++D+  + G ++ A      + V+ 
Sbjct: 361 ACARSGSLDNGKDVHDYIKANNMESNL---FVCNALMDMYTKCGSMDGANSVFSTMVVKD 417

Query: 580 GPAVWGALLGACMIHKDTN---LARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAAT 636
             + W  ++G       T    L   AS    E   E  GY  +L N YS++R ++  A 
Sbjct: 418 IIS-WNTMIGELKPDSRTMACILPACASLSALERGKEIHGY--ILRNGYSSDR-HVANAL 473

Query: 637 VRQVVKKRKLAKA-------PGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMR 689
           V   VK   L  A       P   L+    +  V  SG  +H       A       +MR
Sbjct: 474 VDLYVKCGVLGLARLLFDMIPSKDLV----SWTVMISGYGMHGYGNEAIATF----NEMR 525

Query: 690 EAGFQTETVT 699
           +AG + + V+
Sbjct: 526 DAGIEPDEVS 535



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 55/184 (29%), Positives = 90/184 (48%), Gaps = 18/184 (9%)

Query: 374 EKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKW 433
           ++ +  +NA I  + Q G  E A+ L    Q S++     T SS+L  CA   +++ GK 
Sbjct: 63  DRQVTDYNAKILHFCQLGNLENAMELVCMCQKSELETK--TYSSVLQLCAGSKSLTDGKK 120

Query: 434 VHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGH 493
           VH ++KS N   +  +   L+ +YA CG++ E R +FD M  K+   WN M+S Y   G 
Sbjct: 121 VHSIIKSNNVAVDEVLGLKLVSLYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGD 180

Query: 494 GLEALQLFSEMLHSGI---RPSG-------------VTFLSVLYACSHAGLVREGDEIFQ 537
             E++ LF  M+  GI   RP               +++ S++      GL   G EI++
Sbjct: 181 FKESICLFKIMVEKGIEGKRPESASELFDKLCDRDVISWNSMISGYVSNGLTERGLEIYK 240

Query: 538 SMIH 541
            M++
Sbjct: 241 QMMY 244


>gi|347954516|gb|AEP33758.1| organelle transcript processing 82, partial [Barbarea verna]
          Length = 710

 Score =  472 bits (1215), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 260/692 (37%), Positives = 397/692 (57%), Gaps = 37/692 (5%)

Query: 129 LLHGHAIVSGYGSDLFVGAALVD---LYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLM 185
           ++H   I +G  +  +  + L++   L   F  +  A  VF+ + E + ++WN+M  G  
Sbjct: 20  IIHAQMIKTGLHNTNYALSRLLEFCILSPNFDGLPYAISVFETIQEPNLLIWNTMFRGHA 79

Query: 186 KNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHV 245
            +     +I ++  M+ + G   +S +   +L + A+++  + G +I    LKLG+   +
Sbjct: 80  LSSDPVSAIKLYVCMI-SLGLLPNSYTFPFLLKSCAKLKVSKEGQQIHGHVLKLGYELDL 138

Query: 246 YVLTGLVSFYSKCGE-------------------------------VERAELLFRDIVRP 274
           YV T L+S Y K G                                +E A+ +F +I   
Sbjct: 139 YVHTSLISMYVKNGRWKDAHKVFDGSSHRDVVSYTALITGYASRGYIESAQKMFDEIPVK 198

Query: 275 DLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIH 334
           D++S NA+ISGY   G  + +L LF++++ +  + + ST+V ++      G + L   +H
Sbjct: 199 DVVSWNAIISGYADTGNNKEALDLFKEMMKTNVKPDESTMVTVVSACAQSGSIQLGRQVH 258

Query: 335 SFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTE 394
           S+    G+ SN  ++ AL  +YS+  E+E A  LF   S K + SWN MI GYT   L +
Sbjct: 259 SWIDDHGLGSNLKIVNALIDLYSKCGEVETACGLFQGLSNKDVISWNTMIGGYTHLNLYK 318

Query: 395 EAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSR--NFESNIYVSTA 452
           EA+ LFQEM  S   PN VT+ SIL ACAQLGAI  G+W+H  +  R     +   + T+
Sbjct: 319 EALLLFQEMLRSGENPNDVTMLSILPACAQLGAIDFGRWIHVYIDKRIKGVTNASSLRTS 378

Query: 453 LIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPS 512
           LIDMYAKCG+I  A ++F+ M H++    N MI G+ +HG    A  +FS M  +GI P 
Sbjct: 379 LIDMYAKCGDIEAAHQVFNSMHHRTLSACNAMIFGFAMHGRANAAFDIFSRMRKNGIEPD 438

Query: 513 GVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFI 572
            +TF+ +L ACSH+G++  G  IF+SM  ++   P  EHY CM+D+LG  G  ++A E I
Sbjct: 439 DITFVGLLSACSHSGMLDLGRRIFRSMTQNYKITPKLEHYGCMIDLLGHLGLFKEAEEMI 498

Query: 573 KGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYL 632
             + +EP   +W +LL AC +H +  L    ++KL +++PEN G +VLLSNIY+    + 
Sbjct: 499 NTMTMEPDGVIWCSLLKACKMHGNVELGESFAQKLIKIEPENPGSYVLLSNIYATAGRWN 558

Query: 633 QAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAG 692
           + A +R ++  + + K PGC+ IE+    H F  GD+ HP++  IY MLE++   + EAG
Sbjct: 559 EVANIRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEEAG 618

Query: 693 FQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATK 752
           F  +T   L ++EEE K+  ++ HSEKLAIAFGLI+T+PGT++ I+KNLRVC +CH ATK
Sbjct: 619 FVPDTSEVLQEMEEEFKQGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATK 678

Query: 753 FISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
            ISK+  R I+ RD  RFHHF+ GVCSC DYW
Sbjct: 679 LISKIYKREIIARDRTRFHHFRDGVCSCNDYW 710



 Score =  227 bits (579), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 158/576 (27%), Positives = 289/576 (50%), Gaps = 46/576 (7%)

Query: 13  LSLLKGAKTQSQLTQTHAQIIIHGFQND---LSTVTKLAHRLSDFKATCYARALFFSIPK 69
           LSLL   KT   L   HAQ+I  G  N    LS + +      +F    YA ++F +I +
Sbjct: 6   LSLLHNCKTLQSLRIIHAQMIKTGLHNTNYALSRLLEFCILSPNFDGLPYAISVFETIQE 65

Query: 70  PDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVL 129
           P+L ++N + RG + +  P S+I  Y  +  +  L P+++T+ F+L + +       G  
Sbjct: 66  PNLLIWNTMFRGHALSSDPVSAIKLYVCM-ISLGLLPNSYTFPFLLKSCAKLKVSKEGQQ 124

Query: 130 LHGHAIVSGYGSDLFVGAALVDLYFK-------------------------------FSW 158
           +HGH +  GY  DL+V  +L+ +Y K                                 +
Sbjct: 125 IHGHVLKLGYELDLYVHTSLISMYVKNGRWKDAHKVFDGSSHRDVVSYTALITGYASRGY 184

Query: 159 VKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLP 218
           ++SA+K+FD++P KD V WN++ISG       ++++ +F +M++      D +++  V+ 
Sbjct: 185 IESAQKMFDEIPVKDVVSWNAIISGYADTGNNKEALDLFKEMMKT-NVKPDESTMVTVVS 243

Query: 219 AVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLIS 278
           A A+   ++LG ++       G   ++ ++  L+  YSKCGEVE A  LF+ +   D+IS
Sbjct: 244 ACAQSGSIQLGRQVHSWIDDHGLGSNLKIVNALIDLYSKCGEVETACGLFQGLSNKDVIS 303

Query: 279 CNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCL 338
            N MI GYT     + +L LF+++L S E  N  T++ ++P     G +     IH +  
Sbjct: 304 WNTMIGGYTHLNLYKEALLLFQEMLRSGENPNDVTMLSILPACAQLGAIDFGRWIHVYID 363

Query: 339 K--SGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEA 396
           K   G+ + SS+ T+L  +Y++  ++EAA ++F+    ++L++ NAMI G+  +G    A
Sbjct: 364 KRIKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMHHRTLSACNAMIFGFAMHGRANAA 423

Query: 397 ISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWV-HELVKSRNFESNIYVSTALID 455
             +F  M+ + + P+ +T   +LSAC+  G + LG+ +   + ++      +     +ID
Sbjct: 424 FDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRRIFRSMTQNYKITPKLEHYGCMID 483

Query: 456 MYAKCGNIVEARELFDLMSHKSE-VTWNTMISGYGLHGHGLEALQLFSEML--HSGIRPS 512
           +    G   EA E+ + M+ + + V W +++    +HG+ +E  + F++ L       P 
Sbjct: 484 LLGHLGLFKEAEEMINTMTMEPDGVIWCSLLKACKMHGN-VELGESFAQKLIKIEPENPG 542

Query: 513 GVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPL 548
               LS +YA   AG   E   I +++++D G K +
Sbjct: 543 SYVLLSNIYAT--AGRWNEVANI-RALLNDKGMKKV 575


>gi|225448223|ref|XP_002266190.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33990
           [Vitis vinifera]
          Length = 707

 Score =  472 bits (1215), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 252/648 (38%), Positives = 375/648 (57%), Gaps = 12/648 (1%)

Query: 147 AALVDLYFKFSWVKSARKVFDKM--------PEKDTVLWNSMISGLMKNCCFQDSIWVFG 198
           A L+ LY K   + SAR +FD             ++ L N+M+          ++I ++ 
Sbjct: 62  ARLIILYSKLGDLHSARTLFDHRHHHHHGHTQAPNSFLCNTMLRAYANAGRSYEAIDLYI 121

Query: 199 DMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKC 258
            M R G   +++ +   VL   A       G  +    ++ GF   ++V   LV  Y+KC
Sbjct: 122 YMQRMG-VGVNNFTYPFVLKVCASELGAVFGEVVHGQVVRTGFGSDLFVEAALVDMYAKC 180

Query: 259 GEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLI 318
           GE+  A  +F  ++  D++   AMI+ Y    +   +L LFR++       +  T + + 
Sbjct: 181 GEIGDAHEVFDRMLIRDVVCWTAMITLYEQAERPLKALMLFRKMQEEGFLGDEITAISVA 240

Query: 319 PVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLA 378
                 G   +   +H + + +G + + SV  ++  +Y++   +E AR +FD   E++  
Sbjct: 241 SAVGQLGDGRMAISVHGYAVLNGFIGDVSVGNSIVGMYAKCGNVERARLVFDRMEERNGI 300

Query: 379 SWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELV 438
           SWN+M++GYTQNG   +A+SLF +MQAS+  PNPVT   ++SAC+ LG+  LG+ +H  V
Sbjct: 301 SWNSMLSGYTQNGRPTDALSLFNQMQASECDPNPVTALIMVSACSYLGSKHLGRKLHNFV 360

Query: 439 KSRNFESNIYVSTALIDMYAKCGNIVEARELFD--LMSHKSEVTWNTMISGYGLHGHGLE 496
            S   + +  +  A++DMY KCG++  A E+F+   +  +   +WN +ISGYG+HGHG E
Sbjct: 361 ISSKMDIDTTLRNAIMDMYMKCGDLDTAVEMFNNCELGERDVSSWNVLISGYGVHGHGKE 420

Query: 497 ALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMV 556
           AL+LFS M   G+ P+ +TF S+L ACSHAGL+ EG + F  M      +P  +HYACMV
Sbjct: 421 ALELFSRMQVEGVEPNDITFTSILSACSHAGLIDEGRKCFADMT-KLSVRPEMKHYACMV 479

Query: 557 DILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVG 616
           D+LGRAG L +A   IK +   P   VWGALL AC IH +T L  +A+  LF+L+PE+ G
Sbjct: 480 DMLGRAGFLNEAFRLIKKIPSRPSDEVWGALLLACRIHGNTELGEIAANNLFQLEPEHTG 539

Query: 617 YHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTA 676
           Y+VL+SNIY+A   + +   VRQ +K R L K    ++IE G   H F + DQ  P    
Sbjct: 540 YYVLMSNIYAASNKWKEVEMVRQNMKSRGLKKPAAFSVIEFGTEVHGFHTADQSSPYYRE 599

Query: 677 IYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIR 736
           +Y  +E L  +M+  G+  +    LHDVE E+KE ++  HSEKLA+AFG++  + G  I+
Sbjct: 600 VYRKVESLAIEMKMVGYVPDLSCVLHDVEPEDKEHLLNYHSEKLAVAFGIMKMDQGMPIQ 659

Query: 737 IIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           + KNLRVC DCH A KFIS + GR I+VRD NRFHHF+GG CSCGDYW
Sbjct: 660 VTKNLRVCSDCHWAFKFISSIYGRKIIVRDGNRFHHFQGGRCSCGDYW 707


>gi|449436619|ref|XP_004136090.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15930-like [Cucumis sativus]
          Length = 723

 Score =  472 bits (1215), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 240/654 (36%), Positives = 371/654 (56%), Gaps = 32/654 (4%)

Query: 162 ARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVA 221
           AR++FD++PE +  +WN+MI G  +    Q  + ++ +M+R G    D  +   +     
Sbjct: 71  ARRLFDEIPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRG-VKPDRYTFPFLFKGFT 129

Query: 222 EVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNA 281
               L  G ++    LK G   +V+V T LV  Y  CG+++ A  +F    + D+I+ N 
Sbjct: 130 RDIALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNM 189

Query: 282 MISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSG 341
           +IS Y   GK E S RLF  +        + T+V ++        L     +HS+     
Sbjct: 190 IISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCK 249

Query: 342 IVSNSSVLTALSTVY-------------------------------SRLNEMEAARKLFD 370
           + SN  +  A+  +Y                               + L E++ AR  FD
Sbjct: 250 VESNLVLENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFD 309

Query: 371 ESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISL 430
           +  EK   SW AMI GY ++   +EA+ LF+ MQA+ V P+  T+ S+L+ACA LGA+ L
Sbjct: 310 KMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALEL 369

Query: 431 GKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGL 490
           G+W+   +     +++++V  ALIDMY KCG++ +A  +F  MS + + TW  MI G  +
Sbjct: 370 GEWIRTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLAV 429

Query: 491 HGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAE 550
           +GHG +AL +FS ML + I P  +T++ VL AC+H GLV +G + F  M   HG +P   
Sbjct: 430 NGHGEKALDMFSNMLKASILPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIA 489

Query: 551 HYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFEL 610
           HY C+VD+L RAG+L++A E I+ + ++    VWGALL  C +++++++A +  +++ EL
Sbjct: 490 HYGCLVDLLARAGRLKEAYEVIENMPIKANSIVWGALLAGCRVYRESDMAEMVVKQILEL 549

Query: 611 DPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQL 670
           +P+N   +VLL NIY+A + +     +RQ++  + + K PGC+LIE+ G  H F +GD+ 
Sbjct: 550 EPDNGAVYVLLCNIYAACKRWNDLRELRQMMMDKGIKKTPGCSLIEMNGRVHEFVAGDRS 609

Query: 671 HPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATE 730
           HPQ+  I A L+K+   ++ AG+  +      D+ EE+KE  +  HSEKLAIAFGLI + 
Sbjct: 610 HPQTKNIDAKLDKMTQDLKLAGYSPDISEVFLDIAEEDKENSVFRHSEKLAIAFGLINSP 669

Query: 731 PGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           PG  IRI KNLR+C+DCH   K +SKV  R ++VRD  RFHHFK G+CSC DYW
Sbjct: 670 PGVTIRITKNLRMCMDCHNMAKLVSKVYNREVIVRDRTRFHHFKHGLCSCKDYW 723



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 155/579 (26%), Positives = 270/579 (46%), Gaps = 57/579 (9%)

Query: 12  FLSLLKGAKTQSQLTQTHAQIIIHGF------QNDLSTVTKLAHRLSDFKATCYARALFF 65
            +SLL+  ++  QL Q H Q I  G       QN + T     H   DF+   YAR LF 
Sbjct: 21  LISLLETCESMDQLQQVHCQAIKKGLNANPVLQNRVMTFC-CTHEYGDFQ---YARRLFD 76

Query: 66  SIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRS 125
            IP+P+LF++N +IRG+S  + P+  +  Y  + +   + PD +T+ F+    +      
Sbjct: 77  EIPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRR-GVKPDRYTFPFLFKGFTRDIALE 135

Query: 126 IGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLM 185
            G  LHGH +  G   ++FV  ALV +Y     + +AR VFD  P+ D + WN +IS   
Sbjct: 136 YGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNMIISAYN 195

Query: 186 KNCCFQDSIWVFGDMVRNGGTWLDST-SVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDH 244
           K   F++S  +F  +V      L +T ++  VL A +++++LR G ++           +
Sbjct: 196 KVGKFEESRRLF--LVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVESN 253

Query: 245 VYVLTGLVSFYSKCGEVERAELLFR-----------------------DIVR-------- 273
           + +   ++  Y+ CGE++ A  +FR                       D+ R        
Sbjct: 254 LVLENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDKMPE 313

Query: 274 PDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCI 333
            D +S  AMI GY  + + + +L LFR + A+  + +  T+V ++      G L L   I
Sbjct: 314 KDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELGEWI 373

Query: 334 HSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLT 393
            ++  ++ I ++  V  AL  +Y +  +++ A  +F E S++   +W AMI G   NG  
Sbjct: 374 RTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLAVNGHG 433

Query: 394 EEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLG-KWVHELVKSRNFESNIYVSTA 452
           E+A+ +F  M  + + P+ +T   +LSAC   G +  G K+   +      E NI     
Sbjct: 434 EKALDMFSNMLKASILPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAHYGC 493

Query: 453 LIDMYAKCGNIVEARELFDLMSHKSE-VTWNTMISGYGLHGHGLEALQLFSEMLHSGIRP 511
           L+D+ A+ G + EA E+ + M  K+  + W  +++G  ++     A  +  ++L   + P
Sbjct: 494 LVDLLARAGRLKEAYEVIENMPIKANSIVWGALLAGCRVYRESDMAEMVVKQILE--LEP 551

Query: 512 SG----VTFLSVLYACSHAGLVREGDEIFQSMIHDHGFK 546
                 V   ++  AC     +RE     + M+ D G K
Sbjct: 552 DNGAVYVLLCNIYAACKRWNDLRE----LRQMMMDKGIK 586


>gi|449491161|ref|XP_004158817.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At3g15930-like [Cucumis
           sativus]
          Length = 744

 Score =  472 bits (1215), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 240/654 (36%), Positives = 371/654 (56%), Gaps = 32/654 (4%)

Query: 162 ARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVA 221
           AR++FD++PE +  +WN+MI G  +    Q  + ++ +M+R G    D  +   +     
Sbjct: 92  ARRLFDEIPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRG-VKPDRYTFPFLFKGFT 150

Query: 222 EVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNA 281
               L  G ++    LK G   +V+V T LV  Y  CG+++ A  +F    + D+I+ N 
Sbjct: 151 RDIALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNM 210

Query: 282 MISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSG 341
           +IS Y   GK E S RLF  +        + T+V ++        L     +HS+     
Sbjct: 211 IISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCK 270

Query: 342 IVSNSSVLTALSTVY-------------------------------SRLNEMEAARKLFD 370
           + SN  +  A+  +Y                               + L E++ AR  FD
Sbjct: 271 VESNLVLENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFD 330

Query: 371 ESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISL 430
           +  EK   SW AMI GY ++   +EA+ LF+ MQA+ V P+  T+ S+L+ACA LGA+ L
Sbjct: 331 KMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALEL 390

Query: 431 GKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGL 490
           G+W+   +     +++++V  ALIDMY KCG++ +A  +F  MS + + TW  MI G  +
Sbjct: 391 GEWIRTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLAV 450

Query: 491 HGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAE 550
           +GHG +AL +FS ML + I P  +T++ VL AC+H GLV +G + F  M   HG +P   
Sbjct: 451 NGHGEKALDMFSNMLKASILPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIA 510

Query: 551 HYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFEL 610
           HY C+VD+L RAG+L++A E I+ + ++    VWGALL  C +++++++A +  +++ EL
Sbjct: 511 HYGCLVDLLARAGRLKEAYEVIENMPIKANSIVWGALLAGCRVYRESDMAEMVVKQILEL 570

Query: 611 DPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQL 670
           +P+N   +VLL NIY+A + +     +RQ++  + + K PGC+LIE+ G  H F +GD+ 
Sbjct: 571 EPDNGAVYVLLCNIYAACKRWNDLRELRQMMMDKGIKKXPGCSLIEMNGRVHEFVAGDRS 630

Query: 671 HPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATE 730
           HPQ+  I A L+K+   ++ AG+  +      D+ EE+KE  +  HSEKLAIAFGLI + 
Sbjct: 631 HPQTKNIDAKLDKMTQDLKLAGYSPDISEVFLDIAEEDKENSVFRHSEKLAIAFGLINSP 690

Query: 731 PGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           PG  IRI KNLR+C+DCH   K +SKV  R ++VRD  RFHHFK G+CSC DYW
Sbjct: 691 PGVTIRITKNLRMCMDCHNMAKLVSKVYNREVIVRDRTRFHHFKHGLCSCKDYW 744



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 155/579 (26%), Positives = 270/579 (46%), Gaps = 57/579 (9%)

Query: 12  FLSLLKGAKTQSQLTQTHAQIIIHGF------QNDLSTVTKLAHRLSDFKATCYARALFF 65
            +SLL+  ++  QL Q H Q I  G       QN + T     H   DF+   YAR LF 
Sbjct: 42  LISLLETCESMDQLQQVHCQAIKKGLNANPVLQNRVMTFC-CTHEYGDFQ---YARRLFD 97

Query: 66  SIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRS 125
            IP+P+LF++N +IRG+S  + P+  +  Y  + +   + PD +T+ F+    +      
Sbjct: 98  EIPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRR-GVKPDRYTFPFLFKGFTRDIALE 156

Query: 126 IGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLM 185
            G  LHGH +  G   ++FV  ALV +Y     + +AR VFD  P+ D + WN +IS   
Sbjct: 157 YGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNMIISAYN 216

Query: 186 KNCCFQDSIWVFGDMVRNGGTWLDST-SVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDH 244
           K   F++S  +F  +V      L +T ++  VL A +++++LR G ++           +
Sbjct: 217 KVGKFEESRRLF--LVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVESN 274

Query: 245 VYVLTGLVSFYSKCGEVERAELLFR-----------------------DIVR-------- 273
           + +   ++  Y+ CGE++ A  +FR                       D+ R        
Sbjct: 275 LVLENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDKMPE 334

Query: 274 PDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCI 333
            D +S  AMI GY  + + + +L LFR + A+  + +  T+V ++      G L L   I
Sbjct: 335 KDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELGEWI 394

Query: 334 HSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLT 393
            ++  ++ I ++  V  AL  +Y +  +++ A  +F E S++   +W AMI G   NG  
Sbjct: 395 RTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLAVNGHG 454

Query: 394 EEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLG-KWVHELVKSRNFESNIYVSTA 452
           E+A+ +F  M  + + P+ +T   +LSAC   G +  G K+   +      E NI     
Sbjct: 455 EKALDMFSNMLKASILPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAHYGC 514

Query: 453 LIDMYAKCGNIVEARELFDLMSHKSE-VTWNTMISGYGLHGHGLEALQLFSEMLHSGIRP 511
           L+D+ A+ G + EA E+ + M  K+  + W  +++G  ++     A  +  ++L   + P
Sbjct: 515 LVDLLARAGRLKEAYEVIENMPIKANSIVWGALLAGCRVYRESDMAEMVVKQILE--LEP 572

Query: 512 SG----VTFLSVLYACSHAGLVREGDEIFQSMIHDHGFK 546
                 V   ++  AC     +RE     + M+ D G K
Sbjct: 573 DNGAVYVLLCNIYAACKRWNDLRE----LRQMMMDKGIK 607


>gi|413937268|gb|AFW71819.1| putative pentatricopeptide repeat family protein [Zea mays]
          Length = 830

 Score =  472 bits (1215), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 268/764 (35%), Positives = 428/764 (56%), Gaps = 15/764 (1%)

Query: 27  QTHAQIIIHGFQN-DLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNN 85
           Q HA  +  G  + D+   T L     ++ +    R +F  + K ++  +  ++ G+   
Sbjct: 76  QLHALCVRCGHDHGDIRVGTSLVDMYMNWHSVLDGRKVFEGMLKRNVVTWTSLLTGYIQA 135

Query: 86  EMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFV 145
            +    +  +  +R    + P+ FT+S VLS  ++     +G  +H  +I  G  S +FV
Sbjct: 136 GVLLDVMSLFFRMRAE-GVWPNPFTFSSVLSMVASQGMVDLGQHVHAQSIKFGCCSTVFV 194

Query: 146 GAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGG 205
             +L+++Y K   V+ AR VF +M  +D V WN++++GL+ N    +++ +F D  R+  
Sbjct: 195 CNSLMNMYAKCGLVEEARVVFCRMETRDMVSWNTLMAGLVLNGRDLEALQLFHD-SRSSI 253

Query: 206 TWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAE 265
           T L  ++ + V+   A ++ L L  ++    LK GFH +  V+T L+  Y+K G++++A 
Sbjct: 254 TMLTESTYSTVINLCANLKHLGLARQLHSSVLKHGFHSYGNVMTALMDAYNKAGQLDKAL 313

Query: 266 LLFRDIV-RPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNS---STIVGLIPVF 321
            +F  +    +++S  AMI G   NG    +  LF ++       N    STI+ +    
Sbjct: 314 DVFLLMSGSQNVVSWTAMIDGCIQNGDIPLAAALFSRMREDGVAPNDLTYSTILTVSEAS 373

Query: 322 YPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWN 381
           +P         IH+  +K+      +V TAL   YS+L   E A  +F    +K + SW+
Sbjct: 374 FPPQ-------IHAQVIKTNYECTPTVGTALMVSYSKLCSTEEALSIFKMIDQKDVVSWS 426

Query: 382 AMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGA-ISLGKWVHELVKS 440
           AM+  Y Q G    A + F +M    + PN  T+SS + ACA   A + LG+  H +   
Sbjct: 427 AMLTCYAQAGDCNGATNAFIKMTMHGLKPNEFTISSAIDACASPAAGVDLGRQFHAISIK 486

Query: 441 RNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQL 500
                 + VS+AL+ MYA+ G+I  A+ +F+  + +  ++WN+M+SGY  HG+  +AL +
Sbjct: 487 HRCHDALCVSSALVSMYARKGSIENAQCVFERQTDRDLLSWNSMLSGYAQHGYSQKALDV 546

Query: 501 FSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILG 560
           F +M   GI   G+TFLSV+  C+HAGLV EG + F  M+ D+G  P  +HYACMVD+  
Sbjct: 547 FRQMEVEGIDMDGLTFLSVIMGCAHAGLVEEGQQYFDLMVRDYGITPTMDHYACMVDLYS 606

Query: 561 RAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVL 620
           RAG+L++ +  I+G+    GP +W ALLGAC +HK+  L ++A+EKL  L+P +   +VL
Sbjct: 607 RAGKLDETMSLIEGMPFPAGPTIWRALLGACRVHKNVELGKLAAEKLLSLEPLDSATYVL 666

Query: 621 LSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAM 680
           LSNIYSA   + +   VR+++  +K+ K  GC+ I++    H F + D+ HP S  IYA 
Sbjct: 667 LSNIYSAAGKWKEKDEVRKLMDTKKVRKEAGCSWIQIKNKVHFFIASDKSHPLSEQIYAK 726

Query: 681 LEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKN 740
           L  +  K+++ G+  +T    HDV E++KE M+ +HSE+LA+AFGLIAT P   + I KN
Sbjct: 727 LRAMTAKLKQEGYCPDTSFVPHDVAEDQKEAMLAMHSERLALAFGLIATPPAAPLHIFKN 786

Query: 741 LRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           LRV  D HT  K +S++  R IV+RD  RFHHFK GVCSCGD+W
Sbjct: 787 LRVSGDGHTVMKMVSEIEDREIVMRDCCRFHHFKSGVCSCGDFW 830



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 109/479 (22%), Positives = 205/479 (42%), Gaps = 44/479 (9%)

Query: 1   MSMKTPQSRNLFLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYA 60
           ++M T  + +  ++L    K      Q H+ ++ HGF +  + +T L    +       A
Sbjct: 253 ITMLTESTYSTVINLCANLKHLGLARQLHSSVLKHGFHSYGNVMTALMDAYNKAGQLDKA 312

Query: 61  RALFFSIP-KPDLFLFNVIIRG-FSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAA 118
             +F  +    ++  +  +I G   N ++P ++  F + +R++  + P++ TYS +L+ +
Sbjct: 313 LDVFLLMSGSQNVVSWTAMIDGCIQNGDIPLAAALF-SRMRED-GVAPNDLTYSTILTVS 370

Query: 119 SACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWN 178
            A    S    +H   I + Y     VG AL+  Y K    + A  +F  + +KD V W+
Sbjct: 371 EA----SFPPQIHAQVIKTNYECTPTVGTALMVSYSKLCSTEEALSIFKMIDQKDVVSWS 426

Query: 179 SMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLK 238
           +M++   +      +   F  M  +G    + T  +A+    +    + LG +   + +K
Sbjct: 427 AMLTCYAQAGDCNGATNAFIKMTMHGLKPNEFTISSAIDACASPAAGVDLGRQFHAISIK 486

Query: 239 LGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRL 298
              HD + V + LVS Y++ G +E A+ +F      DL+S N+M+SGY  +G ++ +L +
Sbjct: 487 HRCHDALCVSSALVSMYARKGSIENAQCVFERQTDRDLLSWNSMLSGYAQHGYSQKALDV 546

Query: 299 FRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSR 358
           FRQ+      ++  T + +I             C H     +G+V        L      
Sbjct: 547 FRQMEVEGIDMDGLTFLSVI-----------MGCAH-----AGLVEEGQQYFDL------ 584

Query: 359 LNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSI 418
                    + D     ++  +  M+  Y++ G  +E +SL + M        P    ++
Sbjct: 585 --------MVRDYGITPTMDHYACMVDLYSRAGKLDETMSLIEGM---PFPAGPTIWRAL 633

Query: 419 LSACAQLGAISLGKWVHE-LVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHK 476
           L AC     + LGK   E L+     +S  YV   L ++Y+  G   E  E+  LM  K
Sbjct: 634 LGACRVHKNVELGKLAAEKLLSLEPLDSATYV--LLSNIYSAAGKWKEKDEVRKLMDTK 690


>gi|225425015|ref|XP_002267613.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930 [Vitis vinifera]
 gi|297738214|emb|CBI27415.3| unnamed protein product [Vitis vinifera]
          Length = 743

 Score =  472 bits (1215), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 257/675 (38%), Positives = 385/675 (57%), Gaps = 33/675 (4%)

Query: 142 DLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMV 201
           +LF    ++ +Y K   +   +++F+ MP +D V WN  ISG        D++ V+  M+
Sbjct: 70  NLFSWNTILSVYSKLGLLSQMQQIFNLMPFRDGVSWNLAISGYANYGSCSDAVRVYKLML 129

Query: 202 RNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEV 261
           ++    L+  + + +L   ++ + + LG +I    LK GF   V+V + LV  Y+K G +
Sbjct: 130 KDAAMNLNRITFSTMLILCSKFRCVDLGRQINGQILKFGFGSDVFVGSPLVDMYTKLGLI 189

Query: 262 ERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGL---- 317
             A+  F ++   +++ CN MI+G    G  E S RLF  L        +  I GL    
Sbjct: 190 YDAKRYFDEMPERNVVMCNTMITGLMRCGMIEESQRLFCGLKERDSISWTIMITGLMQNG 249

Query: 318 -----IPVF------------YPFGHLHLTNC-----------IHSFCLKSGIVSNSSVL 349
                + +F            + FG + LT C           IH++ +++    N  V 
Sbjct: 250 LEREALDMFREMRLAGFAMDQFTFGSV-LTACGSLLALGEGKQIHAYVIRTDHKDNVFVG 308

Query: 350 TALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVA 409
           +AL  +YS+   +++A  +F    +K++ SW AM+ GY QNG +EEA+ +F EMQ + V 
Sbjct: 309 SALVDMYSKCRSIKSAETVFKRMPQKNVISWTAMLVGYGQNGFSEEAVKIFFEMQRNGVE 368

Query: 410 PNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEAREL 469
           P+  T+ S++S+CA L ++  G   H         S I VS ALI +Y KCG+   +  L
Sbjct: 369 PDDFTLGSVISSCANLASLEEGAQFHCRALVSGLISFITVSNALITLYGKCGSTENSHRL 428

Query: 470 FDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLV 529
           F  M+ + EV+W  +++GY   G   E + LF  ML  G++P GVTF+ VL ACS AGLV
Sbjct: 429 FTEMNIRDEVSWTALLAGYAQFGKANETIGLFERMLAHGLKPDGVTFIGVLSACSRAGLV 488

Query: 530 REGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLG 589
            +G + F+SMI +HG  P+ +H  C++D+LGRAG+LE+A  FI  +   P    W  LL 
Sbjct: 489 EKGLQYFESMIKEHGIMPIVDHCTCIIDLLGRAGRLEEARNFINNMPCHPDVVGWATLLS 548

Query: 590 ACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKA 649
           +C +H D  + + A++ L  L+P+N   +VLLS++Y+++  + + A +R+ ++ +++ K 
Sbjct: 549 SCRVHGDMEIGKWAADSLIALEPQNPASYVLLSSLYASKGKWDKVAQLRRGMRDKRVRKE 608

Query: 650 PGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEK 709
           PG + I+  G  HVF++ DQ  P    IYA LEKLN KM E G+  +  + LHDVEE EK
Sbjct: 609 PGYSWIKYKGKVHVFSADDQSSPFLGQIYAELEKLNYKMIEEGYVPDMSSVLHDVEESEK 668

Query: 710 ELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANR 769
             M+  HSEKLAIAFGLI   PG  IR+IKNLRVC DCH ATKFISK+T R I+VRDA R
Sbjct: 669 IKMLNHHSEKLAIAFGLIFVPPGLPIRVIKNLRVCGDCHNATKFISKITQREILVRDAVR 728

Query: 770 FHHFKGGVCSCGDYW 784
           FH FK G CSCGD+W
Sbjct: 729 FHLFKDGTCSCGDFW 743



 Score =  208 bits (530), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 159/585 (27%), Positives = 269/585 (45%), Gaps = 73/585 (12%)

Query: 8   SRNLFLSLLK---GAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALF 64
           S N + SLLK    ++ Q+Q  + H  I+    Q +      L           YA  +F
Sbjct: 4   SSNYYASLLKLCCESQNQTQAKKLHCLILKTIKQPETFLSNNLITAYYKLGNLAYAHHVF 63

Query: 65  FSIPKPDLFLFNVI-------------------------------IRGFSNNEMPKSSIC 93
             IP+P+LF +N I                               I G++N      ++ 
Sbjct: 64  DHIPQPNLFSWNTILSVYSKLGLLSQMQQIFNLMPFRDGVSWNLAISGYANYGSCSDAVR 123

Query: 94  FYTHLRKNTALTPDNFTYS--FVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVD 151
            Y  + K+ A+  +  T+S   +L +   C D  +G  ++G  +  G+GSD+FVG+ LVD
Sbjct: 124 VYKLMLKDAAMNLNRITFSTMLILCSKFRCVD--LGRQINGQILKFGFGSDVFVGSPLVD 181

Query: 152 LYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFG------------- 198
           +Y K   +  A++ FD+MPE++ V+ N+MI+GLM+    ++S  +F              
Sbjct: 182 MYTKLGLIYDAKRYFDEMPERNVVMCNTMITGLMRCGMIEESQRLFCGLKERDSISWTIM 241

Query: 199 --------------DMVRN---GGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGF 241
                         DM R     G  +D  +  +VL A   +  L  G +I    ++   
Sbjct: 242 ITGLMQNGLEREALDMFREMRLAGFAMDQFTFGSVLTACGSLLALGEGKQIHAYVIRTDH 301

Query: 242 HDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQ 301
            D+V+V + LV  YSKC  ++ AE +F+ + + ++IS  AM+ GY  NG +E ++++F +
Sbjct: 302 KDNVFVGSALVDMYSKCRSIKSAETVFKRMPQKNVISWTAMLVGYGQNGFSEEAVKIFFE 361

Query: 302 LLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNE 361
           +  +    +  T+  +I        L      H   L SG++S  +V  AL T+Y +   
Sbjct: 362 MQRNGVEPDDFTLGSVISSCANLASLEEGAQFHCRALVSGLISFITVSNALITLYGKCGS 421

Query: 362 MEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSA 421
            E + +LF E + +   SW A++AGY Q G   E I LF+ M A  + P+ VT   +LSA
Sbjct: 422 TENSHRLFTEMNIRDEVSWTALLAGYAQFGKANETIGLFERMLAHGLKPDGVTFIGVLSA 481

Query: 422 CAQLGAISLG-KWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMS-HKSEV 479
           C++ G +  G ++   ++K       +   T +ID+  + G + EAR   + M  H   V
Sbjct: 482 CSRAGLVEKGLQYFESMIKEHGIMPIVDHCTCIIDLLGRAGRLEEARNFINNMPCHPDVV 541

Query: 480 TWNTMISGYGLHGHGLEALQLFSEMLHS--GIRPSGVTFLSVLYA 522
            W T++S   +HG  +E  +  ++ L +     P+    LS LYA
Sbjct: 542 GWATLLSSCRVHGD-MEIGKWAADSLIALEPQNPASYVLLSSLYA 585



 Score = 42.0 bits (97), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 30/127 (23%), Positives = 59/127 (46%), Gaps = 4/127 (3%)

Query: 416 SSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSH 475
           +S+L  C +    +  K +H L+     +   ++S  LI  Y K GN+  A  +FD +  
Sbjct: 9   ASLLKLCCESQNQTQAKKLHCLILKTIKQPETFLSNNLITAYYKLGNLAYAHHVFDHIPQ 68

Query: 476 KSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEI 535
            +  +WNT++S Y   G   +  Q+F+ M        GV++   +   ++ G   +   +
Sbjct: 69  PNLFSWNTILSVYSKLGLLSQMQQIFNLMPFR----DGVSWNLAISGYANYGSCSDAVRV 124

Query: 536 FQSMIHD 542
           ++ M+ D
Sbjct: 125 YKLMLKD 131


>gi|356528966|ref|XP_003533068.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15930-like [Glycine max]
          Length = 712

 Score =  472 bits (1214), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 252/689 (36%), Positives = 387/689 (56%), Gaps = 36/689 (5%)

Query: 130 LHGHAIVSGYGSDLFVGAALVDLYFKFSWVKS--ARKVFDKMPEKDTVLWNSMISGLMKN 187
           +H H I  G  SD      ++         K   AR+VFD +P+    +WN+MI G  + 
Sbjct: 26  IHSHTIKMGLSSDPLFQKRVIAFCCAHESGKMIYARQVFDAIPQPTLFIWNTMIKGYSRI 85

Query: 188 CCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYV 247
              Q+ + ++  M+ +     D  +   +L        L+ G  +    +K GF  +++V
Sbjct: 86  NHPQNGVSMYLLMLASN-IKPDRFTFPFLLKGFTRNMALQYGKVLLNHAVKHGFDSNLFV 144

Query: 248 LTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAE 307
               +  +S C  V+ A  +F      ++++ N M+SGY    + + S  LF ++     
Sbjct: 145 QKAFIHMFSLCRLVDLARKVFDMGDAWEVVTWNIMLSGYNRVKQFKKSKMLFIEMEKRGV 204

Query: 308 RVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVL------------------ 349
             NS T+V ++        L     I+ + +  GIV  + +L                  
Sbjct: 205 SPNSVTLVLMLSACSKLKDLEGGKHIYKY-INGGIVERNLILENVLIDMFAACGEMDEAQ 263

Query: 350 --------------TALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEE 395
                         T++ T ++ + +++ ARK FD+  E+   SW AMI GY +     E
Sbjct: 264 SVFDNMKNRDVISWTSIVTGFANIGQIDLARKYFDQIPERDYVSWTAMIDGYLRMNRFIE 323

Query: 396 AISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALID 455
           A++LF+EMQ S V P+  T+ SIL+ACA LGA+ LG+WV   +   + +++ +V  ALID
Sbjct: 324 ALALFREMQMSNVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNSIKNDTFVGNALID 383

Query: 456 MYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVT 515
           MY KCGN+ +A+++F  M HK + TW  MI G  ++GHG EAL +FS M+ + I P  +T
Sbjct: 384 MYFKCGNVGKAKKVFKEMHHKDKFTWTAMIVGLAINGHGEEALAMFSNMIEASITPDEIT 443

Query: 516 FLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGL 575
           ++ VL AC+HAG+V +G   F SM   HG KP   HY CMVD+LGRAG+LE+A E I  +
Sbjct: 444 YIGVLCACTHAGMVEKGQSFFISMTMQHGIKPNVTHYGCMVDLLGRAGRLEEAHEVIVNM 503

Query: 576 AVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAA 635
            V+P   VWG+LLGAC +HK+  LA +A++++ EL+PEN   +VLL NIY+A + +    
Sbjct: 504 PVKPNSIVWGSLLGACRVHKNVQLAEMAAKQILELEPENGAVYVLLCNIYAACKRWENLR 563

Query: 636 TVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQT 695
            VR+++ +R + K PGC+L+E+ G  + F +GDQ HPQS  IYA LE +   + +AG+  
Sbjct: 564 QVRKLMMERGIKKTPGCSLMELNGNVYEFVAGDQSHPQSKEIYAKLENMMQDLIKAGYSP 623

Query: 696 ETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFIS 755
           +T     D+ EE+KE  +  HSEKLAIA+ LI++ PG  IRI+KNLR+C+DCH   K +S
Sbjct: 624 DTSEVFLDLGEEDKETALYRHSEKLAIAYALISSGPGITIRIVKNLRMCVDCHHMAKLVS 683

Query: 756 KVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           +   R ++VRD  RFHHF+ G CSC ++W
Sbjct: 684 EAYNRELIVRDKTRFHHFRHGSCSCNNFW 712



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 136/518 (26%), Positives = 244/518 (47%), Gaps = 45/518 (8%)

Query: 13  LSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKL-----AHRLSDFKATCYARALFFSI 67
           +SLL+  K+  QL Q H+  I  G  +D     ++     AH         YAR +F +I
Sbjct: 11  ISLLEKCKSMYQLKQIHSHTIKMGLSSDPLFQKRVIAFCCAHESGKM---IYARQVFDAI 67

Query: 68  PKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIG 127
           P+P LF++N +I+G+S    P++ +  Y  L   + + PD FT+ F+L   +       G
Sbjct: 68  PQPTLFIWNTMIKGYSRINHPQNGVSMYL-LMLASNIKPDRFTFPFLLKGFTRNMALQYG 126

Query: 128 VLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKN 187
            +L  HA+  G+ S+LFV  A + ++     V  ARKVFD     + V WN M+SG  + 
Sbjct: 127 KVLLNHAVKHGFDSNLFVQKAFIHMFSLCRLVDLARKVFDMGDAWEVVTWNIMLSGYNRV 186

Query: 188 CCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYV 247
             F+ S  +F +M + G +  +S ++  +L A +++++L  G  I    +  G  +   +
Sbjct: 187 KQFKKSKMLFIEMEKRGVS-PNSVTLVLMLSACSKLKDLEGGKHIYKY-INGGIVERNLI 244

Query: 248 LTG-LVSFYSKCGEVERAELLF-----RDIV--------------------------RPD 275
           L   L+  ++ CGE++ A+ +F     RD++                            D
Sbjct: 245 LENVLIDMFAACGEMDEAQSVFDNMKNRDVISWTSIVTGFANIGQIDLARKYFDQIPERD 304

Query: 276 LISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHS 335
            +S  AMI GY    +   +L LFR++  S  + +  T+V ++      G L L   + +
Sbjct: 305 YVSWTAMIDGYLRMNRFIEALALFREMQMSNVKPDEFTMVSILTACAHLGALELGEWVKT 364

Query: 336 FCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEE 395
           +  K+ I +++ V  AL  +Y +   +  A+K+F E   K   +W AMI G   NG  EE
Sbjct: 365 YIDKNSIKNDTFVGNALIDMYFKCGNVGKAKKVFKEMHHKDKFTWTAMIVGLAINGHGEE 424

Query: 396 AISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGK-WVHELVKSRNFESNIYVSTALI 454
           A+++F  M  + + P+ +T   +L AC   G +  G+ +   +      + N+     ++
Sbjct: 425 ALAMFSNMIEASITPDEITYIGVLCACTHAGMVEKGQSFFISMTMQHGIKPNVTHYGCMV 484

Query: 455 DMYAKCGNIVEARELFDLMSHK-SEVTWNTMISGYGLH 491
           D+  + G + EA E+   M  K + + W +++    +H
Sbjct: 485 DLLGRAGRLEEAHEVIVNMPVKPNSIVWGSLLGACRVH 522



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 68/295 (23%), Positives = 130/295 (44%), Gaps = 6/295 (2%)

Query: 30  AQIIIHGFQN-DLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNEMP 88
           AQ +    +N D+ + T +    ++      AR  F  IP+ D   +  +I G+      
Sbjct: 262 AQSVFDNMKNRDVISWTSIVTGFANIGQIDLARKYFDQIPERDYVSWTAMIDGYLRMNRF 321

Query: 89  KSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAA 148
             ++  +  ++ +  + PD FT   +L+A +      +G  +  +   +   +D FVG A
Sbjct: 322 IEALALFREMQMSN-VKPDEFTMVSILTACAHLGALELGEWVKTYIDKNSIKNDTFVGNA 380

Query: 149 LVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWL 208
           L+D+YFK   V  A+KVF +M  KD   W +MI GL  N   ++++ +F +M+    T  
Sbjct: 381 LIDMYFKCGNVGKAKKVFKEMHHKDKFTWTAMIVGLAINGHGEEALAMFSNMIEASIT-P 439

Query: 209 DSTSVAAVLPAVAEVQELRLGME-IQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERA-EL 266
           D  +   VL A      +  G      + ++ G   +V     +V    + G +E A E+
Sbjct: 440 DEITYIGVLCACTHAGMVEKGQSFFISMTMQHGIKPNVTHYGCMVDLLGRAGRLEEAHEV 499

Query: 267 LFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVF 321
           +    V+P+ I   +++     +   + +    +Q+L   E  N +  V L  ++
Sbjct: 500 IVNMPVKPNSIVWGSLLGACRVHKNVQLAEMAAKQIL-ELEPENGAVYVLLCNIY 553


>gi|347954542|gb|AEP33771.1| organelle transcript processing 82, partial [Thlaspi arvense]
          Length = 673

 Score =  472 bits (1214), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 258/662 (38%), Positives = 386/662 (58%), Gaps = 34/662 (5%)

Query: 156 FSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAA 215
           F     A  VF  + E + ++WN+M+ G   +     ++ ++  M+ + G   +S +   
Sbjct: 13  FDGFPYAISVFATIQEPNQLIWNTMLRGYALSSDPVSALKLYVVMI-SLGLLPNSYTFPF 71

Query: 216 VLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLF-----RD 270
           +L + A+ +    G +I    LKLG+   +YV T L+S Y++ G +E A  +F     RD
Sbjct: 72  LLKSCAKSKAFEEGQQIHGHVLKLGYEPDLYVHTSLISMYAQNGRLEDAHKVFDRSSHRD 131

Query: 271 IVR--------------------------PDLISCNAMISGYTCNGKTESSLRLFRQLLA 304
           +V                            D++S NAMISGY   G  + +L LF++++ 
Sbjct: 132 VVSYTALITGYASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEMMK 191

Query: 305 SAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEA 364
           +  R +  T+V ++        + L   +HS+    G  SN  ++ AL  +YS+  ++E 
Sbjct: 192 TNVRPDEGTMVTVLSACAQSRSVELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGQVET 251

Query: 365 ARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQ 424
           A  LF+  S K + SWN +I GYT   L +EA+ LFQEM  S  +PN VT+ SIL ACA 
Sbjct: 252 ACGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTIVSILPACAH 311

Query: 425 LGAISLGKWVHELV--KSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWN 482
           LGAI +G+W+H  +  K ++  +   + T+LIDMYAKCG+I  A ++F+ M HKS  +WN
Sbjct: 312 LGAIDIGRWIHVYIDKKLKDVTNAPSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWN 371

Query: 483 TMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHD 542
            MI G+ +HG       LFS M  +GI P  +TF+ +L ACSH+G +  G  IF+SM  D
Sbjct: 372 AMIFGFAMHGRANAGFDLFSRMRKNGIEPDDITFVGLLSACSHSGKLDLGRHIFKSMTQD 431

Query: 543 HGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARV 602
           +   P  EHY CM+D+LG +G  ++A E IK + +EP   +W +LL AC  H +  LA  
Sbjct: 432 YDITPKLEHYGCMIDLLGHSGLFKEAKEMIKTMPMEPDGVIWCSLLKACRRHGNLELAES 491

Query: 603 ASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPH 662
            +  L +++PEN G +VLLSNIY+   ++ + A VR ++  + + K PGC+ IE+    H
Sbjct: 492 FARNLMKVEPENPGSYVLLSNIYATAGEWDEVAKVRALLNGKGMKKVPGCSSIEIDSEVH 551

Query: 663 VFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAI 722
            F  GD+LHP++  IY MLE++   + EAGF  +T   L ++EEE KE  ++ HSEKLAI
Sbjct: 552 EFIVGDKLHPRNREIYGMLEEMEALLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAI 611

Query: 723 AFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGD 782
           AFGLI+T+PGT++ I+KNLRVC +CH ATK +SK+  R I+ RD  RFHHF+ GVCSC D
Sbjct: 612 AFGLISTKPGTKLTIVKNLRVCRNCHEATKLVSKIYKREIIARDRTRFHHFRDGVCSCND 671

Query: 783 YW 784
           +W
Sbjct: 672 FW 673



 Score =  216 bits (551), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 151/565 (26%), Positives = 281/565 (49%), Gaps = 55/565 (9%)

Query: 54  FKATCYARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSF 113
           F    YA ++F +I +P+  ++N ++RG++ +  P S++  Y  +  +  L P+++T+ F
Sbjct: 13  FDGFPYAISVFATIQEPNQLIWNTMLRGYALSSDPVSALKLYV-VMISLGLLPNSYTFPF 71

Query: 114 VLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFK------------------ 155
           +L + +       G  +HGH +  GY  DL+V  +L+ +Y +                  
Sbjct: 72  LLKSCAKSKAFEEGQQIHGHVLKLGYEPDLYVHTSLISMYAQNGRLEDAHKVFDRSSHRD 131

Query: 156 -FSW------------VKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVR 202
             S+            ++SA+++FD++P KD V WN+MISG  +   +++++ +F +M++
Sbjct: 132 VVSYTALITGYASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEMMK 191

Query: 203 NGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVE 262
                 D  ++  VL A A+ + + LG ++       GF  ++ ++  L+  YSKCG+VE
Sbjct: 192 T-NVRPDEGTMVTVLSACAQSRSVELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGQVE 250

Query: 263 RAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFY 322
            A  LF  +   D++S N +I GYT     + +L LF+++L S E  N  TIV ++P   
Sbjct: 251 TACGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTIVSILPACA 310

Query: 323 PFGHLHLTNCIHSFCLK--SGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASW 380
             G + +   IH +  K    + +  S+ T+L  +Y++  ++EAA ++F+    KSL+SW
Sbjct: 311 HLGAIDIGRWIHVYIDKKLKDVTNAPSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSW 370

Query: 381 NAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHE-LVK 439
           NAMI G+  +G       LF  M+ + + P+ +T   +LSAC+  G + LG+ + + + +
Sbjct: 371 NAMIFGFAMHGRANAGFDLFSRMRKNGIEPDDITFVGLLSACSHSGKLDLGRHIFKSMTQ 430

Query: 440 SRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSE-VTWNTMISGYGLHGHGLEAL 498
             +    +     +ID+    G   EA+E+   M  + + V W +++     HG+ LE  
Sbjct: 431 DYDITPKLEHYGCMIDLLGHSGLFKEAKEMIKTMPMEPDGVIWCSLLKACRRHGN-LELA 489

Query: 499 QLFSEMLH--SGIRPSGVTFLSVLYACSHAGLVREGDEI--FQSMIHDHGFKPLAEHYAC 554
           + F+  L       P     LS +YA   AG   E DE+   +++++  G K +    + 
Sbjct: 490 ESFARNLMKVEPENPGSYVLLSNIYAT--AG---EWDEVAKVRALLNGKGMKKVPGCSSI 544

Query: 555 MVDILGRAGQLEKALEFIKGLAVEP 579
            +D         +  EFI G  + P
Sbjct: 545 EID--------SEVHEFIVGDKLHP 561



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/208 (24%), Positives = 93/208 (44%), Gaps = 4/208 (1%)

Query: 27  QTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNE 86
           Q H+ I  HGF ++L  V  L    S       A  LF  +   D+  +N +I G+++  
Sbjct: 219 QVHSWIDDHGFGSNLKIVNALIDLYSKCGQVETACGLFEGLSCKDVVSWNTLIGGYTHMN 278

Query: 87  MPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGH--AIVSGYGSDLF 144
           + K ++  +  + + +  +P++ T   +L A +      IG  +H +    +    +   
Sbjct: 279 LYKEALLLFQEMLR-SGESPNDVTIVSILPACAHLGAIDIGRWIHVYIDKKLKDVTNAPS 337

Query: 145 VGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNG 204
           +  +L+D+Y K   +++A +VF+ M  K    WN+MI G   +        +F  M +N 
Sbjct: 338 LRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFGFAMHGRANAGFDLFSRMRKN- 396

Query: 205 GTWLDSTSVAAVLPAVAEVQELRLGMEI 232
           G   D  +   +L A +   +L LG  I
Sbjct: 397 GIEPDDITFVGLLSACSHSGKLDLGRHI 424


>gi|125558027|gb|EAZ03563.1| hypothetical protein OsI_25699 [Oryza sativa Indica Group]
          Length = 528

 Score =  472 bits (1214), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 238/531 (44%), Positives = 338/531 (63%), Gaps = 15/531 (2%)

Query: 264 AELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYP 323
           A   F +I  P+ +   AM SGY  N     SL LFR ++AS    +S+++V        
Sbjct: 3   ARRAFDEIPDPNPVIVTAMASGYVRNNLVYHSLELFRAMIAS----DSASVVDEAAALVA 58

Query: 324 FG------HLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSR--LNEMEAARKLFDESSEK 375
           F          +T  +H+   K G   N+ V+  +   Y++    ++E ARK+FD + E+
Sbjct: 59  FSASARVPDRGVTASLHALIAKIGFERNAGVVNTMLDSYAKGGSRDLEVARKVFD-TMER 117

Query: 376 SLASWNAMIAGYTQNGLTEEAISLFQEM--QASKVAPNPVTVSSILSACAQLGAISLGKW 433
            + SWN+MIA Y QNG++ EAI L+ +M      +  N V +S++L ACA  GAI  GK 
Sbjct: 118 DVVSWNSMIALYAQNGMSAEAIGLYSKMLNVGGGIKCNAVALSAVLLACAHAGAIQTGKH 177

Query: 434 VHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGH 493
           +H  V     E N+YV T+++DMY+KCG +  A   F  +  K+ ++W+ MI+GYG+HG 
Sbjct: 178 IHNQVVRMGLEENVYVGTSIVDMYSKCGRVEMASRAFRKIKEKNILSWSAMITGYGMHGR 237

Query: 494 GLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYA 553
           G EAL++F+EM  SG+RP+ +TF+SVL ACSHAGL+ EG   + +M  + G +   EHY 
Sbjct: 238 GQEALEIFTEMKRSGLRPNYITFISVLAACSHAGLLDEGRYWYNAMKQEFGIEAGVEHYG 297

Query: 554 CMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPE 613
           CMVD+LGRAG L++A   IK + V+P  A+WGALL AC IHK+  LA ++ ++LFELD  
Sbjct: 298 CMVDLLGRAGCLDEAYSLIKEMKVKPDAAIWGALLSACRIHKNVELAEMSVKRLFELDAS 357

Query: 614 NVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQ 673
           N GY+VLLSNIY+    +     +R +VK R++ K PG +  E+ G  ++F  GD+ HPQ
Sbjct: 358 NSGYYVLLSNIYAEAGMWKDVERIRLLVKTRRIEKPPGYSSFELKGKIYLFYVGDKSHPQ 417

Query: 674 STAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGT 733
              IY+ LEKL  +M+EAG+   T + LHD++EEEKE  +++HSEKLA+AF L+ + P +
Sbjct: 418 HIEIYSYLEKLLERMQEAGYVPNTGSVLHDLDEEEKESALRIHSEKLAVAFALMNSVPRS 477

Query: 734 EIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
            I IIKNLRVC DCHTA KFI+K+T R I++RD  RFHHFK G+CSC DYW
Sbjct: 478 VIHIIKNLRVCSDCHTAMKFITKITEREIIIRDLQRFHHFKDGLCSCRDYW 528



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 112/409 (27%), Positives = 183/409 (44%), Gaps = 45/409 (11%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSI-CFYTHLRKNTALTPDNFTYSFVLSAA 118
           AR  F  IP P+  +   +  G+  N +   S+  F   +  ++A   D        SA+
Sbjct: 3   ARRAFDEIPDPNPVIVTAMASGYVRNNLVYHSLELFRAMIASDSASVVDEAAALVAFSAS 62

Query: 119 SACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSW--VKSARKVFDKMPEKDTVL 176
           +   DR +   LH      G+  +  V   ++D Y K     ++ ARKVFD M E+D V 
Sbjct: 63  ARVPDRGVTASLHALIAKIGFERNAGVVNTMLDSYAKGGSRDLEVARKVFDTM-ERDVVS 121

Query: 177 WNSMISGLMKNCCFQDSIWVFGDMVR-NGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCL 235
           WNSMI+   +N    ++I ++  M+   GG   ++ +++AVL A A    ++ G  I   
Sbjct: 122 WNSMIALYAQNGMSAEAIGLYSKMLNVGGGIKCNAVALSAVLLACAHAGAIQTGKHIHNQ 181

Query: 236 GLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESS 295
            +++G  ++VYV T +V  YSKCG VE A   FR I   +++S +AMI+GY  +G+ + +
Sbjct: 182 VVRMGLEENVYVGTSIVDMYSKCGRVEMASRAFRKIKEKNILSWSAMITGYGMHGRGQEA 241

Query: 296 LRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTV 355
           L +F ++  S  R N  T + +           L  C H+  L  G    +++       
Sbjct: 242 LEIFTEMKRSGLRPNYITFISV-----------LAACSHAGLLDEGRYWYNAMKQEFGI- 289

Query: 356 YSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTV 415
                             E  +  +  M+    + G  +EA SL +EM   KV P+    
Sbjct: 290 ------------------EAGVEHYGCMVDLLGRAGCLDEAYSLIKEM---KVKPDAAIW 328

Query: 416 SSILSACAQLGAISLGKWVHELVKSRNFE---SNIYVSTALIDMYAKCG 461
            ++LSAC     + L     E+   R FE   SN      L ++YA+ G
Sbjct: 329 GALLSACRIHKNVELA----EMSVKRLFELDASNSGYYVLLSNIYAEAG 373


>gi|414587348|tpg|DAA37919.1| TPA: hypothetical protein ZEAMMB73_411767 [Zea mays]
          Length = 920

 Score =  472 bits (1214), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 268/782 (34%), Positives = 413/782 (52%), Gaps = 2/782 (0%)

Query: 3   MKTPQSRNLFLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARA 62
           + TP   +  LS     K  +Q    HAQ+    F ++      L      F +   A  
Sbjct: 141 IPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNALIALYLGFGSFKLAER 200

Query: 63  LFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACC 122
           +F  +   D   FN +I G +     + ++  +  ++  + L PD  T + +L+A ++  
Sbjct: 201 VFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQL-SGLRPDCVTVASLLAACASVG 259

Query: 123 DRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMIS 182
           D   G  LH + + +G   D     +L+DLY K   +++A  +F+     + VLWN M+ 
Sbjct: 260 DLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLV 319

Query: 183 GLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFH 242
              +      S  +FG M +  G   +  +   +L       ++ LG +I  L +K GF 
Sbjct: 320 AYGQISDLAKSFEIFGQM-QATGIHPNKFTYPCILRTCTCTGQIELGEQIHSLSIKNGFE 378

Query: 243 DHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQL 302
             +YV   L+  YSK   +++A  +   + + D++S  +MI+GY  +   E +L  F+++
Sbjct: 379 SDMYVSGVLIDMYSKYRCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKEM 438

Query: 303 LASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEM 362
                  ++  +            +     IH+    SG  ++ S+   L  +Y+R    
Sbjct: 439 QDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSGYAADISIWNTLVNLYARCGRS 498

Query: 363 EAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSAC 422
           E A  LF E   K   +WN +I+G+ Q+ L E+A+ +F +M  +    N  T  S +SA 
Sbjct: 499 EEAFSLFREIDHKDEITWNGLISGFGQSRLYEQALMVFMKMSQAGAKYNVFTFISAISAL 558

Query: 423 AQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWN 482
           A L  I  GK VH         S   V+ ALI +Y KCG+I +A+ +F  MS ++EV+WN
Sbjct: 559 ANLADIKQGKQVHGRAVKTGHTSETEVANALISLYGKCGSIEDAKMIFSEMSLRNEVSWN 618

Query: 483 TMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHD 542
           T+I+    HG GLEAL LF +M   G++P+ VTF+ VL ACSH GLV EG   F+SM + 
Sbjct: 619 TIITSCSQHGRGLEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSNV 678

Query: 543 HGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARV 602
           +G  P+ +HYAC+VDILGRAGQL++A  F+  + +     +W  LL AC +HK+  +  +
Sbjct: 679 YGLNPIPDHYACVVDILGRAGQLDRARRFVDEMPITANAMIWRTLLSACKVHKNIEIGEL 738

Query: 603 ASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPH 662
           A++ L EL+P +   +VLLSN Y+    +     VR+++K R + K PG + IEV    H
Sbjct: 739 AAKHLLELEPHDSASYVLLSNAYAVTGKWANRDQVRKMMKDRGIRKEPGRSWIEVKNAVH 798

Query: 663 VFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAI 722
            F  GD+LHP S  IY  L +LN ++ + G++ E     H+ E+E+K+    VHSEKLA+
Sbjct: 799 AFFVGDRLHPLSDQIYKFLSELNDRLSKIGYKQENPNLFHEKEQEQKDPTAFVHSEKLAV 858

Query: 723 AFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGD 782
           AFGL+   P   +R+IKNLRVC DCH+  KF S+VT R IV+RD  RFHHF  G CSCGD
Sbjct: 859 AFGLMTLPPCIPLRVIKNLRVCDDCHSWMKFTSEVTRREIVLRDVYRFHHFNSGSCSCGD 918

Query: 783 YW 784
           YW
Sbjct: 919 YW 920



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 135/495 (27%), Positives = 235/495 (47%), Gaps = 31/495 (6%)

Query: 104 LTPDNFTYSFVLSAASACCDRSIG---------------------VLLHGHAIVSGYGSD 142
           + PDN      L AA A   R++G                     + +H  ++V G G+D
Sbjct: 18  IVPDNPEKILSLVAAKASHHRALGSADLTCALQACRGRGNRWPLVLEIHATSVVRGLGAD 77

Query: 143 LFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVR 202
             +G  L+DLY K   V  AR+VF ++  +D V W +M+SG  +    +++  ++  M  
Sbjct: 78  RLIGNLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQRGLGKEAFRLYSQM-- 135

Query: 203 NGGTWLDSTS----VAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKC 258
               W         +++VL A  + +    G  I     K  F    +V   L++ Y   
Sbjct: 136 ---HWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNALIALYLGF 192

Query: 259 GEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLI 318
           G  + AE +F D++  D ++ N +ISG+   G  E +L++F ++  S  R +  T+  L+
Sbjct: 193 GSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLL 252

Query: 319 PVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLA 378
                 G L     +HS+ LK+G+  +     +L  +Y +  ++E A  +F+     ++ 
Sbjct: 253 AACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIFNLGDRTNVV 312

Query: 379 SWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELV 438
            WN M+  Y Q     ++  +F +MQA+ + PN  T   IL  C   G I LG+ +H L 
Sbjct: 313 LWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNKFTYPCILRTCTCTGQIELGEQIHSLS 372

Query: 439 KSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEAL 498
               FES++YVS  LIDMY+K   + +AR++ +++  +  V+W +MI+GY  H    EAL
Sbjct: 373 IKNGFESDMYVSGVLIDMYSKYRCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEAL 432

Query: 499 QLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDI 558
             F EM   G+ P  +   S   AC+    +R+G +I  + ++  G+      +  +V++
Sbjct: 433 ATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQI-HARVYVSGYAADISIWNTLVNL 491

Query: 559 LGRAGQLEKALEFIK 573
             R G+ E+A    +
Sbjct: 492 YARCGRSEEAFSLFR 506



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 85/259 (32%), Positives = 138/259 (53%), Gaps = 4/259 (1%)

Query: 333 IHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGL 392
           IH+  +  G+ ++  +   L  +Y++   +  AR++F E S +   SW AM++GY Q GL
Sbjct: 65  IHATSVVRGLGADRLIGNLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQRGL 124

Query: 393 TEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTA 452
            +EA  L+ +M  + V P P  +SS+LSAC +    + G+ +H  V  + F S  +V  A
Sbjct: 125 GKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNA 184

Query: 453 LIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPS 512
           LI +Y   G+   A  +F  M     VT+NT+ISG+   GHG  ALQ+F EM  SG+RP 
Sbjct: 185 LIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPD 244

Query: 513 GVTFLSVLYACSHAGLVREGDEIFQSMIH-DHGFKPLAEHYACMVDILGRAGQLEKALEF 571
            VT  S+L AC+  G +++G ++   ++     F  + E    ++D+  + G +E A + 
Sbjct: 245 CVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITE--GSLLDLYVKCGDIETAHD- 301

Query: 572 IKGLAVEPGPAVWGALLGA 590
           I  L       +W  +L A
Sbjct: 302 IFNLGDRTNVVLWNLMLVA 320


>gi|224114351|ref|XP_002332376.1| predicted protein [Populus trichocarpa]
 gi|222832200|gb|EEE70677.1| predicted protein [Populus trichocarpa]
          Length = 660

 Score =  471 bits (1213), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 253/658 (38%), Positives = 377/658 (57%), Gaps = 7/658 (1%)

Query: 130 LHGHAIVSGYGSDLFVGAALVDL--YFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKN 187
           +H   + +G   D F  + +V      +   ++ AR VF ++P   +   NS+I G    
Sbjct: 7   IHAQMLRTGLFFDPFTASKIVAFCSLQESGSLQYARLVFSQIPNPTSYTCNSIIRGCTDK 66

Query: 188 CCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYV 247
              Q+++  + +M+  G    D  +  ++  +     E   G +I C   KLGF    Y 
Sbjct: 67  NLHQEALLFYQEMMVQG-LIPDRYTFPSLFKSCRNSSE---GKQIHCHSTKLGFASDTYA 122

Query: 248 LTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAE 307
              L++ YS CG +  A  +F  +    ++S   MI  +    +   ++RLF +++ S  
Sbjct: 123 QNTLMNMYSNCGCLVSARKVFDKMEDKTVVSWATMIGVHAQWDQPNEAVRLFDRMMKSEN 182

Query: 308 -RVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAAR 366
            + N  T+V ++        L +   IH +  + G   +  + T L  VY +   ++ AR
Sbjct: 183 VKPNEVTLVNVLTACARARDLAMVKRIHEYIDEHGFGRHVVLNTVLMDVYCKCGCVQLAR 242

Query: 367 KLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLG 426
            LFD++ EK+L SWN MI G+ ++   EEA+ LF+EMQ   +  + VT++S+L AC  LG
Sbjct: 243 DLFDKAQEKNLFSWNIMINGHVEDSNYEEALLLFREMQTKGIKGDKVTMASLLLACTHLG 302

Query: 427 AISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMIS 486
           A+ LGKW+H  +K +  + ++ + TAL+DMYAKCG+I  A ++F  M  K  +TW  +I 
Sbjct: 303 ALELGKWLHAYIKKQRIDVDVALGTALVDMYAKCGSIETAIQVFHEMPEKDVMTWTALIL 362

Query: 487 GYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFK 546
           G  + G    ALQ F EM   G++P  +TF+ VL ACSHAG V EG   F SM   +G +
Sbjct: 363 GLAMCGQAENALQYFDEMHIKGVKPDAITFVGVLAACSHAGFVDEGISHFNSMSDTYGIQ 422

Query: 547 PLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEK 606
           P  EHY  +VDILGRAG++ +A E IK + + P   V G LLGAC IH +   A  A+++
Sbjct: 423 PTIEHYGGLVDILGRAGRIAEAEELIKSMPMAPDQFVLGGLLGACRIHGNLEAAERAAKQ 482

Query: 607 LFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTS 666
           L E+DP + G +VLLSNIY + + + +A   R+++ +R + K PGC+ IEV G  H F  
Sbjct: 483 LLEIDPYHSGTYVLLSNIYKSSKKWEEAKRTRELMAERGMRKPPGCSQIEVHGVVHEFVK 542

Query: 667 GDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGL 726
           GD  H QS+ I  MLE +  K++ AG+  +    L D+ EEEKE  + +HSEKLAIAFGL
Sbjct: 543 GDSSHRQSSEINEMLEDMISKLKNAGYVPDKSEVLFDMAEEEKETELSLHSEKLAIAFGL 602

Query: 727 IATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           ++T  GT IR++KNLR+C DCH+ATK ISK+  R I+VRD NRFHHFK G CSC  +W
Sbjct: 603 LSTSVGTPIRVVKNLRICSDCHSATKLISKLYNREIIVRDRNRFHHFKDGTCSCRGFW 660



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 134/454 (29%), Positives = 221/454 (48%), Gaps = 7/454 (1%)

Query: 23  SQLTQTHAQIIIHGFQNDLSTVTKLAH--RLSDFKATCYARALFFSIPKPDLFLFNVIIR 80
           SQL Q HAQ++  G   D  T +K+     L +  +  YAR +F  IP P  +  N IIR
Sbjct: 2   SQLKQIHAQMLRTGLFFDPFTASKIVAFCSLQESGSLQYARLVFSQIPNPTSYTCNSIIR 61

Query: 81  GFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYG 140
           G ++  + + ++ FY  +     L PD +T+    S   +C + S G  +H H+   G+ 
Sbjct: 62  GCTDKNLHQEALLFYQEMMVQ-GLIPDRYTFP---SLFKSCRNSSEGKQIHCHSTKLGFA 117

Query: 141 SDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDM 200
           SD +    L+++Y     + SARKVFDKM +K  V W +MI    +     +++ +F  M
Sbjct: 118 SDTYAQNTLMNMYSNCGCLVSARKVFDKMEDKTVVSWATMIGVHAQWDQPNEAVRLFDRM 177

Query: 201 VRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGE 260
           +++     +  ++  VL A A  ++L +   I     + GF  HV + T L+  Y KCG 
Sbjct: 178 MKSENVKPNEVTLVNVLTACARARDLAMVKRIHEYIDEHGFGRHVVLNTVLMDVYCKCGC 237

Query: 261 VERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPV 320
           V+ A  LF      +L S N MI+G+  +   E +L LFR++     + +  T+  L+  
Sbjct: 238 VQLARDLFDKAQEKNLFSWNIMINGHVEDSNYEEALLLFREMQTKGIKGDKVTMASLLLA 297

Query: 321 FYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASW 380
               G L L   +H++  K  I  + ++ TAL  +Y++   +E A ++F E  EK + +W
Sbjct: 298 CTHLGALELGKWLHAYIKKQRIDVDVALGTALVDMYAKCGSIETAIQVFHEMPEKDVMTW 357

Query: 381 NAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLG-KWVHELVK 439
            A+I G    G  E A+  F EM    V P+ +T   +L+AC+  G +  G    + +  
Sbjct: 358 TALILGLAMCGQAENALQYFDEMHIKGVKPDAITFVGVLAACSHAGFVDEGISHFNSMSD 417

Query: 440 SRNFESNIYVSTALIDMYAKCGNIVEARELFDLM 473
           +   +  I     L+D+  + G I EA EL   M
Sbjct: 418 TYGIQPTIEHYGGLVDILGRAGRIAEAEELIKSM 451



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 107/470 (22%), Positives = 206/470 (43%), Gaps = 37/470 (7%)

Query: 8   SRNLFLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSI 67
            R  F SL K  +  S+  Q H      GF +D      L +  S+      AR +F  +
Sbjct: 87  DRYTFPSLFKSCRNSSEGKQIHCHSTKLGFASDTYAQNTLMNMYSNCGCLVSARKVFDKM 146

Query: 68  PKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIG 127
               +  +  +I   +  + P  ++  +  + K+  + P+  T   VL+A +   D ++ 
Sbjct: 147 EDKTVVSWATMIGVHAQWDQPNEAVRLFDRMMKSENVKPNEVTLVNVLTACARARDLAMV 206

Query: 128 VLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKN 187
             +H +    G+G  + +   L+D+Y K   V+ AR +FDK  EK+   WN MI+G +++
Sbjct: 207 KRIHEYIDEHGFGRHVVLNTVLMDVYCKCGCVQLARDLFDKAQEKNLFSWNIMINGHVED 266

Query: 188 CCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYV 247
             +++++ +F +M +  G   D  ++A++L A   +  L LG  +     K      V +
Sbjct: 267 SNYEEALLLFREM-QTKGIKGDKVTMASLLLACTHLGALELGKWLHAYIKKQRIDVDVAL 325

Query: 248 LTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAE 307
            T LV  Y+KCG +E A  +F ++   D+++  A+I G    G+ E++L+ F ++     
Sbjct: 326 GTALVDMYAKCGSIETAIQVFHEMPEKDVMTWTALILGLAMCGQAENALQYFDEMHIKGV 385

Query: 308 RVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARK 367
           + ++ T VG+           L  C H+  +  GI    S   ++S  Y           
Sbjct: 386 KPDAITFVGV-----------LAACSHAGFVDEGI----SHFNSMSDTY----------- 419

Query: 368 LFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGA 427
                 + ++  +  ++    + G   EA  L + M    +AP+   +  +L AC   G 
Sbjct: 420 ----GIQPTIEHYGGLVDILGRAGRIAEAEELIKSM---PMAPDQFVLGGLLGACRIHGN 472

Query: 428 ISLG-KWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHK 476
           +    +   +L++   + S  YV   L ++Y       EA+   +LM+ +
Sbjct: 473 LEAAERAAKQLLEIDPYHSGTYV--LLSNIYKSSKKWEEAKRTRELMAER 520


>gi|242082165|ref|XP_002445851.1| hypothetical protein SORBIDRAFT_07g026890 [Sorghum bicolor]
 gi|241942201|gb|EES15346.1| hypothetical protein SORBIDRAFT_07g026890 [Sorghum bicolor]
          Length = 1084

 Score =  471 bits (1212), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 245/722 (33%), Positives = 405/722 (56%), Gaps = 4/722 (0%)

Query: 60   ARALFFSIP-KPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAA 118
            AR +F ++P K ++ ++N+I+ G++     + S+  +  + +   +TPD    S +L   
Sbjct: 362  ARRVFDAMPSKGNVHVWNLIMGGYAKAAEFEESLLLFEQMHE-LGITPDEHALSCLLKCI 420

Query: 119  SACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWN 178
            +       G++ HG+ +  G+G+   V  AL+  Y K + + +A  VFD+MP +DT+ WN
Sbjct: 421  TCLSCARDGLVAHGYLVKLGFGTQCAVCNALISFYAKSNMIDNAVLVFDRMPHQDTISWN 480

Query: 179  SMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLK 238
            S+ISG   N    ++I +F  M   G   LDST++ +VLPA A      +G  +    +K
Sbjct: 481  SVISGCTSNGLNSEAIELFVRMWMQGHE-LDSTTLLSVLPACARSHYWFVGRVVHGYSVK 539

Query: 239  LGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRL 298
             G      +   L+  YS C +      +FR++ + +++S  AMI+ YT  G  +    L
Sbjct: 540  TGLIGETSLANALLDMYSNCSDWHSTNQIFRNMAQKNVVSWTAMITSYTRAGLFDKVAGL 599

Query: 299  FRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSR 358
             ++++    + +   +  ++  F     L     +H + +++G+     V  AL  +Y  
Sbjct: 600  LQEMVLDGIKPDVFAVTSVLHGFAGDESLKQGKSVHGYAIRNGMEKLLPVANALMEMYVN 659

Query: 359  LNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSI 418
               ME AR +FD  + K + SWN +I GY++N    E+ SLF +M   +  PN VT++ I
Sbjct: 660  CRNMEEARLVFDHVTNKDIISWNTLIGGYSRNNFANESFSLFSDMLL-QFKPNTVTMTCI 718

Query: 419  LSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSE 478
            L A A + ++  G+ +H     R F  + Y S AL+DMY KCG ++ AR LFD ++ K+ 
Sbjct: 719  LPAVASISSLERGREIHAYALRRGFLEDSYTSNALVDMYVKCGALLVARVLFDRLTKKNL 778

Query: 479  VTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQS 538
            ++W  MI+GYG+HG G +A+ LF +M  SG+ P   +F ++LYAC H+GL  EG + F +
Sbjct: 779  ISWTIMIAGYGMHGCGKDAVALFEQMRGSGVEPDTASFSAILYACCHSGLTAEGWKFFNA 838

Query: 539  MIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTN 598
            M  ++  +P  +HY C+VD+L   G L++A EFI+ + +EP  ++W +LL  C IH+D  
Sbjct: 839  MRKEYKIEPKLKHYTCIVDLLSHTGNLKEAFEFIESMPIEPDSSIWVSLLHGCRIHRDVK 898

Query: 599  LARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVG 658
            LA   ++++F+L+PEN GY+VLL+NIY+    +     ++  +  R L +  GC+ IEV 
Sbjct: 899  LAEKVADRVFKLEPENTGYYVLLANIYAEAERWEAVKKLKNKIGGRGLRENTGCSWIEVR 958

Query: 659  GTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSE 718
            G  HVF + ++ HP+   I   L+ +  +MRE G   +   +L    +   +  +  HS 
Sbjct: 959  GKVHVFIADNRNHPEWNRIAEFLDHVARRMREEGHDPKKKYSLMGANDAVHDEALCGHSS 1018

Query: 719  KLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVC 778
            KLA+ FG++    G  IR+ KN +VC  CH A KFISK+  R I++RD++RFHHF+GG C
Sbjct: 1019 KLAVTFGVLHLPEGRPIRVTKNSKVCSHCHEAAKFISKMCNREIILRDSSRFHHFEGGRC 1078

Query: 779  SC 780
            SC
Sbjct: 1079 SC 1080



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 127/419 (30%), Positives = 211/419 (50%), Gaps = 16/419 (3%)

Query: 123 DRSIGVLLHGHAIV-SGYGSDL--FVGAALVDLYFKFSWVKSARKVFDKMPEK--DTVLW 177
           +RS+      HA+V +G G  +   +G  LV  Y K   +  AR VFD+MP +  D  +W
Sbjct: 107 ERSLEAARRAHALVRAGTGGIIGSVLGKRLVLAYLKCGDLGGARMVFDEMPPRVADVRVW 166

Query: 178 NSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGL 237
            S++S   K   FQ+ + +F  M +  G   D+ +V+ VL  +A +  +  G  I  L  
Sbjct: 167 TSLMSAYAKAGDFQEGVSLFRQM-QCCGVSPDAHAVSCVLKCIASLGSITEGEVIHGLLE 225

Query: 238 KLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLR 297
           KLG  +   V   L++ YS+CG +E A  +F  +   D IS N+ ISGY  NG  + ++ 
Sbjct: 226 KLGLGEACAVANALIALYSRCGCMEDAMQVFDSMHARDAISWNSTISGYFSNGWHDRAVD 285

Query: 298 LFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSN-----SSVLTAL 352
           LF ++ +    ++S T++ ++P     G   +   +H + +KSG++ +     S +  AL
Sbjct: 286 LFSKMWSEGTEISSVTVLSVLPACAELGFELVGKVVHGYSMKSGLLWDLESVQSGIDEAL 345

Query: 353 ST----VYSRLNEMEAARKLFDE-SSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASK 407
            +    +Y +  +M +AR++FD   S+ ++  WN ++ GY +    EE++ LF++M    
Sbjct: 346 GSKLVFMYVKCGDMGSARRVFDAMPSKGNVHVWNLIMGGYAKAAEFEESLLLFEQMHELG 405

Query: 408 VAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEAR 467
           + P+   +S +L     L     G   H  +    F +   V  ALI  YAK   I  A 
Sbjct: 406 ITPDEHALSCLLKCITCLSCARDGLVAHGYLVKLGFGTQCAVCNALISFYAKSNMIDNAV 465

Query: 468 ELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHA 526
            +FD M H+  ++WN++ISG   +G   EA++LF  M   G      T LSVL AC+ +
Sbjct: 466 LVFDRMPHQDTISWNSVISGCTSNGLNSEAIELFVRMWMQGHELDSTTLLSVLPACARS 524



 Score =  162 bits (409), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 133/498 (26%), Positives = 224/498 (44%), Gaps = 21/498 (4%)

Query: 60  ARALFFSIPK--PDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSA 117
           AR +F  +P    D+ ++  ++  ++     +  +  +  + +   ++PD    S VL  
Sbjct: 149 ARMVFDEMPPRVADVRVWTSLMSAYAKAGDFQEGVSLFRQM-QCCGVSPDAHAVSCVLKC 207

Query: 118 ASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLW 177
            ++    + G ++HG     G G    V  AL+ LY +   ++ A +VFD M  +D + W
Sbjct: 208 IASLGSITEGEVIHGLLEKLGLGEACAVANALIALYSRCGCMEDAMQVFDSMHARDAISW 267

Query: 178 NSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGL 237
           NS ISG   N     ++ +F  M    GT + S +V +VLPA AE+    +G  +    +
Sbjct: 268 NSTISGYFSNGWHDRAVDLFSKMWSE-GTEISSVTVLSVLPACAELGFELVGKVVHGYSM 326

Query: 238 KLG-FHDHVYVLTG--------LVSFYSKCGEVERAELLFRDI-VRPDLISCNAMISGYT 287
           K G   D   V +G        LV  Y KCG++  A  +F  +  + ++   N ++ GY 
Sbjct: 327 KSGLLWDLESVQSGIDEALGSKLVFMYVKCGDMGSARRVFDAMPSKGNVHVWNLIMGGYA 386

Query: 288 CNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSS 347
              + E SL LF Q+       +   +  L+               H + +K G  +  +
Sbjct: 387 KAAEFEESLLLFEQMHELGITPDEHALSCLLKCITCLSCARDGLVAHGYLVKLGFGTQCA 446

Query: 348 VLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASK 407
           V  AL + Y++ N ++ A  +FD    +   SWN++I+G T NGL  EAI LF  M    
Sbjct: 447 VCNALISFYAKSNMIDNAVLVFDRMPHQDTISWNSVISGCTSNGLNSEAIELFVRMWMQG 506

Query: 408 VAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEAR 467
              +  T+ S+L ACA+     +G+ VH             ++ AL+DMY+ C +     
Sbjct: 507 HELDSTTLLSVLPACARSHYWFVGRVVHGYSVKTGLIGETSLANALLDMYSNCSDWHSTN 566

Query: 468 ELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAG 527
           ++F  M+ K+ V+W  MI+ Y   G   +   L  EM+  GI+P      SVL+  +   
Sbjct: 567 QIFRNMAQKNVVSWTAMITSYTRAGLFDKVAGLLQEMVLDGIKPDVFAVTSVLHGFA--- 623

Query: 528 LVREGDEIFQSMIHDHGF 545
               GDE  +     HG+
Sbjct: 624 ----GDESLKQGKSVHGY 637



 Score =  129 bits (324), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 94/300 (31%), Positives = 143/300 (47%), Gaps = 19/300 (6%)

Query: 251 LVSFYSKCGEVERAELLFRDIVRP---DLISCNAMISGYTCNGKTESSLRLFRQLLASAE 307
           LV  Y KCG++  A ++F D + P   D+    +++S Y   G  +  + LFRQ+     
Sbjct: 136 LVLAYLKCGDLGGARMVF-DEMPPRVADVRVWTSLMSAYAKAGDFQEGVSLFRQMQCCGV 194

Query: 308 RVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARK 367
             ++  +  ++      G +     IH    K G+    +V  AL  +YSR   ME A +
Sbjct: 195 SPDAHAVSCVLKCIASLGSITEGEVIHGLLEKLGLGEACAVANALIALYSRCGCMEDAMQ 254

Query: 368 LFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGA 427
           +FD    +   SWN+ I+GY  NG  + A+ LF +M +     + VTV S+L ACA+LG 
Sbjct: 255 VFDSMHARDAISWNSTISGYFSNGWHDRAVDLFSKMWSEGTEISSVTVLSVLPACAELGF 314

Query: 428 ISLGKWVHE-------LVKSRNFESNI--YVSTALIDMYAKCGNIVEARELFDLMSHKSE 478
             +GK VH        L    + +S I   + + L+ MY KCG++  AR +FD M  K  
Sbjct: 315 ELVGKVVHGYSMKSGLLWDLESVQSGIDEALGSKLVFMYVKCGDMGSARRVFDAMPSKGN 374

Query: 479 V-TWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVL-----YACSHAGLVREG 532
           V  WN ++ GY       E+L LF +M   GI P       +L      +C+  GLV  G
Sbjct: 375 VHVWNLIMGGYAKAAEFEESLLLFEQMHELGITPDEHALSCLLKCITCLSCARDGLVAHG 434



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 67/209 (32%), Positives = 114/209 (54%), Gaps = 7/209 (3%)

Query: 340 SGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEK--SLASWNAMIAGYTQNGLTEEAI 397
           +G +  S +   L   Y +  ++  AR +FDE   +   +  W ++++ Y + G  +E +
Sbjct: 124 TGGIIGSVLGKRLVLAYLKCGDLGGARMVFDEMPPRVADVRVWTSLMSAYAKAGDFQEGV 183

Query: 398 SLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMY 457
           SLF++MQ   V+P+   VS +L   A LG+I+ G+ +H L++         V+ ALI +Y
Sbjct: 184 SLFRQMQCCGVSPDAHAVSCVLKCIASLGSITEGEVIHGLLEKLGLGEACAVANALIALY 243

Query: 458 AKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFL 517
           ++CG + +A ++FD M  +  ++WN+ ISGY  +G    A+ LFS+M   G   S VT L
Sbjct: 244 SRCGCMEDAMQVFDSMHARDAISWNSTISGYFSNGWHDRAVDLFSKMWSEGTEISSVTVL 303

Query: 518 SVLYACSHAGLVREGDEIFQSMIHDHGFK 546
           SVL AC+  G      E+   ++H +  K
Sbjct: 304 SVLPACAELGF-----ELVGKVVHGYSMK 327



 Score = 46.6 bits (109), Expect = 0.057,   Method: Compositional matrix adjust.
 Identities = 40/164 (24%), Positives = 69/164 (42%), Gaps = 13/164 (7%)

Query: 27  QTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNE 86
           + HA  +  GF  D  T   L        A   AR LF  + K +L  + ++I G+  + 
Sbjct: 733 EIHAYALRRGFLEDSYTSNALVDMYVKCGALLVARVLFDRLTKKNLISWTIMIAGYGMHG 792

Query: 87  MPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVG 146
             K ++  +  +R  + + PD  ++S +L    ACC    G+   G    +    +  + 
Sbjct: 793 CGKDAVALFEQMR-GSGVEPDTASFSAIL---YACCHS--GLTAEGWKFFNAMRKEYKIE 846

Query: 147 AAL------VDLYFKFSWVKSARKVFDKMP-EKDTVLWNSMISG 183
             L      VDL      +K A +  + MP E D+ +W S++ G
Sbjct: 847 PKLKHYTCIVDLLSHTGNLKEAFEFIESMPIEPDSSIWVSLLHG 890


>gi|357449183|ref|XP_003594868.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355483916|gb|AES65119.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 874

 Score =  471 bits (1212), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 287/813 (35%), Positives = 435/813 (53%), Gaps = 54/813 (6%)

Query: 6   PQSRNLFLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATC----YAR 61
           P     F ++LK A    Q      Q+  H F+   +  T + + L +    C     AR
Sbjct: 82  PPDNFAFPAVLK-ATAGIQDLNLGKQLHAHVFKFGQALPTAVPNSLVNMYGKCGDIDAAR 140

Query: 62  ALFFSIPKPDLFLFNVIIRGFSNNEMPKSSI-CFYTHLRKNTALTPDNFTYSFVLSAASA 120
            +F  I   D   +N +I      E  + ++  F   L +N    P +FT   ++S A A
Sbjct: 141 RVFDEITNRDDVSWNSMINAACRFEEWELAVHLFRLMLLENVG--PTSFT---LVSVAHA 195

Query: 121 CCDRSIGVLL--HGHAIVSGYGS-DLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLW 177
           C +   G+LL    HA V   G    F   ALV +Y K   V  A+ +FD   +KD V W
Sbjct: 196 CSNLINGLLLGKQVHAFVLRNGDWRTFTNNALVTMYAKLGRVYEAKTLFDVFDDKDLVSW 255

Query: 178 NSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGL 237
           N++IS L +N  F++++     M+++G    +  ++A+VLPA + ++ L  G EI    L
Sbjct: 256 NTIISSLSQNDRFEEALLYLHVMLQSG-VRPNGVTLASVLPACSHLEMLGCGKEIHAFVL 314

Query: 238 -KLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSL 296
                 ++ +V   LV  Y  C + E+  L+F  + R  +   NAMI+GY  N     ++
Sbjct: 315 MNNDLIENSFVGCALVDMYCNCKQPEKGRLVFDGMFRRTIAVWNAMIAGYVRNEFDYEAI 374

Query: 297 RLFRQLLAS-AERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTV 355
            LF +++       NS T+  ++P             IHS  +K G   +  V  AL  +
Sbjct: 375 ELFVEMVFELGLSPNSVTLSSVLPACVRCESFLDKEGIHSCVVKWGFEKDKYVQNALMDM 434

Query: 356 YSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASK-------- 407
           YSR+  +E AR +F   + K + SWN MI GY   G  ++A++L  +MQ  +        
Sbjct: 435 YSRMGRIEIARSIFGSMNRKDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQAEHRINTF 494

Query: 408 ----------VAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMY 457
                     + PN VT+ ++L  CA L A+  GK +H     +    ++ V +AL+DMY
Sbjct: 495 DDYEDNKNFPLKPNSVTLMTVLPGCAALAALGKGKEIHAYAVKQMLSKDVAVGSALVDMY 554

Query: 458 AKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSG-----IRPS 512
           AKCG +  +R +F+ MS ++ +TWN +I  YG+HG G EAL+LF  M+  G     IRP+
Sbjct: 555 AKCGCLNLSRTVFEQMSVRNVITWNVLIMAYGMHGKGEEALKLFRRMVEEGDNNREIRPN 614

Query: 513 GVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFI 572
            VT++++  + SH+G+V EG  +F +M   HG +P ++HYAC+VD+LGR+GQ+E+A   I
Sbjct: 615 EVTYIAIFASLSHSGMVDEGLNLFYTMKAKHGIEPTSDHYACLVDLLGRSGQIEEAYNLI 674

Query: 573 KGLAVEPGPA-VWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDY 631
           K +         W +LLGAC IH++  +  +A++ LF LDP  + Y              
Sbjct: 675 KTMPSNMKKVDAWSSLLGACKIHQNLEIGEIAAKNLFVLDPNVLDYGT------------ 722

Query: 632 LQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREA 691
            + + + + +K++ + K PGC+ IE G   H F +GD  HPQS  ++  LE L+ +M++ 
Sbjct: 723 -KQSMLGRKMKEKGVRKEPGCSWIEHGDEVHKFLAGDVSHPQSKEVHEYLETLSLRMKKE 781

Query: 692 GFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTAT 751
           G+  +T   LH+V EEEKE M+  HSE+LAIAFGL+ T PGT IR+ KNLRVC DCH AT
Sbjct: 782 GYVPDTSCVLHNVGEEEKETMLCGHSERLAIAFGLLNTSPGTTIRVAKNLRVCNDCHVAT 841

Query: 752 KFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           KFISK+  R I++RD  RFHHF+ G CSCGDYW
Sbjct: 842 KFISKIVDREIILRDVRRFHHFRNGTCSCGDYW 874



 Score =  219 bits (558), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 164/529 (31%), Positives = 257/529 (48%), Gaps = 34/529 (6%)

Query: 91  SICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALV 150
           +I  YT++     + PDNF +  VL A +   D ++G  LH H    G      V  +LV
Sbjct: 69  AISTYTNM-VTAGVPPDNFAFPAVLKATAGIQDLNLGKQLHAHVFKFGQALPTAVPNSLV 127

Query: 151 DLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRN--GGTWL 208
           ++Y K   + +AR+VFD++  +D V WNSMI+   +   ++ ++ +F  M+    G T  
Sbjct: 128 NMYGKCGDIDAARRVFDEITNRDDVSWNSMINAACRFEEWELAVHLFRLMLLENVGPTSF 187

Query: 209 DSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLF 268
              SVA     +  +  L LG ++    L+ G     +    LV+ Y+K G V  A+ LF
Sbjct: 188 TLVSVAHACSNL--INGLLLGKQVHAFVLRNG-DWRTFTNNALVTMYAKLGRVYEAKTLF 244

Query: 269 RDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLH 328
                 DL+S N +IS  + N + E +L     +L S  R N  T+  ++P      HL 
Sbjct: 245 DVFDDKDLVSWNTIISSLSQNDRFEEALLYLHVMLQSGVRPNGVTLASVLPA---CSHLE 301

Query: 329 LTNC---IHSFCL-KSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMI 384
           +  C   IH+F L  + ++ NS V  AL  +Y    + E  R +FD    +++A WNAMI
Sbjct: 302 MLGCGKEIHAFVLMNNDLIENSFVGCALVDMYCNCKQPEKGRLVFDGMFRRTIAVWNAMI 361

Query: 385 AGYTQNGLTEEAISLFQEMQAS-KVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNF 443
           AGY +N    EAI LF EM     ++PN VT+SS+L AC +  +    + +H  V    F
Sbjct: 362 AGYVRNEFDYEAIELFVEMVFELGLSPNSVTLSSVLPACVRCESFLDKEGIHSCVVKWGF 421

Query: 444 ESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSE 503
           E + YV  AL+DMY++ G I  AR +F  M+ K  V+WNTMI+GY + G   +AL L  +
Sbjct: 422 EKDKYVQNALMDMYSRMGRIEIARSIFGSMNRKDIVSWNTMITGYVVCGRHDDALNLLHD 481

Query: 504 MLHS------------------GIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGF 545
           M                      ++P+ VT ++VL  C+    + +G EI    +     
Sbjct: 482 MQRGQAEHRINTFDDYEDNKNFPLKPNSVTLMTVLPGCAALAALGKGKEIHAYAVKQMLS 541

Query: 546 KPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIH 594
           K +A   A +VD+  + G L  +    + ++V      W  L+ A  +H
Sbjct: 542 KDVAVGSA-LVDMYAKCGCLNLSRTVFEQMSVR-NVITWNVLIMAYGMH 588



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 55/176 (31%), Positives = 90/176 (51%), Gaps = 14/176 (7%)

Query: 372 SSEKSLAS-WNAMIAGYTQNGLT-EEAISLFQEMQASKVAPNPVTVSSILSACAQLGAIS 429
           ++E  L S W + +   TQ+  T  +AIS +  M  + V P+     ++L A A +  ++
Sbjct: 43  AAEPRLPSEWVSHLRSQTQSSSTFHQAISTYTNMVTAGVPPDNFAFPAVLKATAGIQDLN 102

Query: 430 LGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYG 489
           LGK +H  V          V  +L++MY KCG+I  AR +FD ++++ +V+WN+MI+   
Sbjct: 103 LGKQLHAHVFKFGQALPTAVPNSLVNMYGKCGDIDAARRVFDEITNRDDVSWNSMINAAC 162

Query: 490 LHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACS------------HAGLVREGD 533
                  A+ LF  ML   + P+  T +SV +ACS            HA ++R GD
Sbjct: 163 RFEEWELAVHLFRLMLLENVGPTSFTLVSVAHACSNLINGLLLGKQVHAFVLRNGD 218


>gi|356530157|ref|XP_003533650.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
           mitochondrial-like [Glycine max]
          Length = 711

 Score =  471 bits (1212), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 260/660 (39%), Positives = 386/660 (58%), Gaps = 31/660 (4%)

Query: 148 ALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMV-RNGGT 206
           A+V  YF+    + A  +F+KMP+++TV WN +ISG +KN    ++  VF  M  RN  +
Sbjct: 60  AMVAAYFEARQPREALLLFEKMPQRNTVSWNGLISGHIKNGMLSEARRVFDTMPDRNVVS 119

Query: 207 WLDSTSVAAVLPAVAEVQELRLGMEIQ-------CLG--LKLGFHDH------------V 245
           W            VAE + L   M  +        LG  L+ G  D             V
Sbjct: 120 WTSMVRGYVRNGDVAEAERLFWHMPHKNVVSWTVMLGGLLQEGRVDDARKLFDMMPEKDV 179

Query: 246 YVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLAS 305
             +T ++  Y + G ++ A  LF ++ + ++++  AM+SGY  NGK + + +LF  +   
Sbjct: 180 VAVTNMIGGYCEEGRLDEARALFDEMPKRNVVTWTAMVSGYARNGKVDVARKLFEVM--- 236

Query: 306 AERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAA 365
            ER   S    L+   +       ++   +  +K  +V N  ++      +    E++ A
Sbjct: 237 PERNEVSWTAMLLGYTHSGRMREASSLFDAMPVKPVVVCNEMIMG-----FGLNGEVDKA 291

Query: 366 RKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQL 425
           R++F    E+   +W+AMI  Y + G   EA+ LF+ MQ   +A N  ++ S+LS C  L
Sbjct: 292 RRVFKGMKERDNGTWSAMIKVYERKGYELEALGLFRRMQREGLALNFPSLISVLSVCVSL 351

Query: 426 GAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMI 485
            ++  GK VH  +    F+ ++YV++ LI MY KCGN+V A+++F+    K  V WN+MI
Sbjct: 352 ASLDHGKQVHAQLVRSEFDQDLYVASVLITMYVKCGNLVRAKQVFNRFPLKDVVMWNSMI 411

Query: 486 SGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGF 545
           +GY  HG G EAL +F +M  SG+ P  VTF+ VL ACS++G V+EG E+F++M   +  
Sbjct: 412 TGYSQHGLGEEALNVFHDMCSSGVPPDDVTFIGVLSACSYSGKVKEGLELFETMKCKYQV 471

Query: 546 KPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASE 605
           +P  EHYAC+VD+LGRA Q+ +A++ ++ + +EP   VWGALLGAC  H   +LA VA E
Sbjct: 472 EPGIEHYACLVDLLGRADQVNEAMKLVEKMPMEPDAIVWGALLGACRTHMKLDLAEVAVE 531

Query: 606 KLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFT 665
           KL +L+P+N G +VLLSN+Y+ +  +     +R+ +K R + K PGC+ IEV    H+FT
Sbjct: 532 KLAQLEPKNAGPYVLLSNMYAYKGRWRDVEVLREKIKARSVTKLPGCSWIEVEKKVHMFT 591

Query: 666 SGD-QLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAF 724
            GD + HP+   I  MLEKL G +REAG+  +    LHDV+EEEK   +  HSEKLA+A+
Sbjct: 592 GGDSKGHPEQPIIMKMLEKLGGLLREAGYCPDGSFVLHDVDEEEKTHSLGYHSEKLAVAY 651

Query: 725 GLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           GL+    G  IR++KNLRVC DCH+A K I+KVTGR I++RDANRFHHFK G CSC DYW
Sbjct: 652 GLLKVPEGMPIRVMKNLRVCGDCHSAIKLIAKVTGREIILRDANRFHHFKDGHCSCKDYW 711



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 106/446 (23%), Positives = 205/446 (45%), Gaps = 44/446 (9%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGF-SNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAA 118
           AR +F ++P  ++  +  ++RG+  N ++ ++   F+    KN        +++ +L   
Sbjct: 105 ARRVFDTMPDRNVVSWTSMVRGYVRNGDVAEAERLFWHMPHKNVV------SWTVMLG-- 156

Query: 119 SACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDL------YFKFSWVKSARKVFDKMPEK 172
                   G+L  G    +    D+     +V +      Y +   +  AR +FD+MP++
Sbjct: 157 --------GLLQEGRVDDARKLFDMMPEKDVVAVTNMIGGYCEEGRLDEARALFDEMPKR 208

Query: 173 DTVLWNSMISGLMKNCCFQDSIWVFGDMV-RNGGTW----LDSTSVAAVLPAVAEVQELR 227
           + V W +M+SG  +N     +  +F  M  RN  +W    L  T    +  A +    + 
Sbjct: 209 NVVTWTAMVSGYARNGKVDVARKLFEVMPERNEVSWTAMLLGYTHSGRMREASSLFDAMP 268

Query: 228 LGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYT 287
           +   + C  + +GF        GL       GEV++A  +F+ +   D  + +AMI  Y 
Sbjct: 269 VKPVVVCNEMIMGF--------GL------NGEVDKARRVFKGMKERDNGTWSAMIKVYE 314

Query: 288 CNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSS 347
             G    +L LFR++      +N  +++ ++ V      L     +H+  ++S    +  
Sbjct: 315 RKGYELEALGLFRRMQREGLALNFPSLISVLSVCVSLASLDHGKQVHAQLVRSEFDQDLY 374

Query: 348 VLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASK 407
           V + L T+Y +   +  A+++F+    K +  WN+MI GY+Q+GL EEA+++F +M +S 
Sbjct: 375 VASVLITMYVKCGNLVRAKQVFNRFPLKDVVMWNSMITGYSQHGLGEEALNVFHDMCSSG 434

Query: 408 VAPNPVTVSSILSACAQLGAISLGKWVHELVKSR-NFESNIYVSTALIDMYAKCGNIVEA 466
           V P+ VT   +LSAC+  G +  G  + E +K +   E  I     L+D+  +   + EA
Sbjct: 435 VPPDDVTFIGVLSACSYSGKVKEGLELFETMKCKYQVEPGIEHYACLVDLLGRADQVNEA 494

Query: 467 RELFDLMSHKSE-VTWNTMISGYGLH 491
            +L + M  + + + W  ++     H
Sbjct: 495 MKLVEKMPMEPDAIVWGALLGACRTH 520



 Score = 93.2 bits (230), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 85/336 (25%), Positives = 138/336 (41%), Gaps = 59/336 (17%)

Query: 242 HDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQ 301
           H  V     +V+ Y +  +   A LLF  + + + +S N +ISG+  NG    + R+F  
Sbjct: 52  HRTVSSWNAMVAAYFEARQPREALLLFEKMPQRNTVSWNGLISGHIKNGMLSEARRVFDT 111

Query: 302 LLASAERVNSSTIVGLI------PVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTV 355
           +        +S + G +           F H+   N +    +  G++    V       
Sbjct: 112 MPDRNVVSWTSMVRGYVRNGDVAEAERLFWHMPHKNVVSWTVMLGGLLQEGRV------- 164

Query: 356 YSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTV 415
                  + ARKLFD   EK + +   MI GY + G  +EA +LF EM    V    VT 
Sbjct: 165 -------DDARKLFDMMPEKDVVAVTNMIGGYCEEGRLDEARALFDEMPKRNV----VTW 213

Query: 416 SSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSH 475
           ++++S  A+ G + + + + E++  RN  S     TA++  Y   G + EA  LFD M  
Sbjct: 214 TAMVSGYARNGKVDVARKLFEVMPERNEVS----WTAMLLGYTHSGRMREASSLFDAMPV 269

Query: 476 KSEVTWNTMISGYGLH-------------------------------GHGLEALQLFSEM 504
           K  V  N MI G+GL+                               G+ LEAL LF  M
Sbjct: 270 KPVVVCNEMIMGFGLNGEVDKARRVFKGMKERDNGTWSAMIKVYERKGYELEALGLFRRM 329

Query: 505 LHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMI 540
              G+  +  + +SVL  C     +  G ++   ++
Sbjct: 330 QREGLALNFPSLISVLSVCVSLASLDHGKQVHAQLV 365



 Score = 83.2 bits (204), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 73/295 (24%), Positives = 124/295 (42%), Gaps = 78/295 (26%)

Query: 356 YSRLNEMEAARKLFDES--SEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPV 413
           Y+R  +++ ARK+FDE+    ++++SWNAM+A Y +     EA+ LF++M       N V
Sbjct: 32  YARNGQLDHARKVFDETPLPHRTVSSWNAMVAAYFEARQPREALLLFEKMPQR----NTV 87

Query: 414 TVSSILSACAQLGAISLGKWVHELVKSRNF------------------------------ 443
           + + ++S   + G +S  + V + +  RN                               
Sbjct: 88  SWNGLISGHIKNGMLSEARRVFDTMPDRNVVSWTSMVRGYVRNGDVAEAERLFWHMPHKN 147

Query: 444 -------------ESNIYVSTALIDM---------------YAKCGNIVEARELFDLMSH 475
                        E  +  +  L DM               Y + G + EAR LFD M  
Sbjct: 148 VVSWTVMLGGLLQEGRVDDARKLFDMMPEKDVVAVTNMIGGYCEEGRLDEARALFDEMPK 207

Query: 476 KSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEI 535
           ++ VTW  M+SGY  +G    A +LF  M       + V++ ++L   +H+G +RE   +
Sbjct: 208 RNVVTWTAMVSGYARNGKVDVARKLFEVMPER----NEVSWTAMLLGYTHSGRMREASSL 263

Query: 536 FQSMIHDHGFKPLAEHYAC--MVDILGRAGQLEKALEFIKGLAVEPGPAVWGALL 588
           F +M       P+     C  M+   G  G+++KA    KG+  E     W A++
Sbjct: 264 FDAM-------PVKPVVVCNEMIMGFGLNGEVDKARRVFKGMK-ERDNGTWSAMI 310



 Score = 82.4 bits (202), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 82/373 (21%), Positives = 164/373 (43%), Gaps = 49/373 (13%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNN-EMPKSSICFYTHLRKN----TALTPDNFTYSFV 114
           ARALF  +PK ++  +  ++ G++ N ++  +   F     +N    TA+    +T+S  
Sbjct: 198 ARALFDEMPKRNVVTWTAMVSGYARNGKVDVARKLFEVMPERNEVSWTAMLL-GYTHSGR 256

Query: 115 LSAASACCD-RSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKD 173
           +  AS+  D   +  ++  + ++ G+G +                V  AR+VF  M E+D
Sbjct: 257 MREASSLFDAMPVKPVVVCNEMIMGFGLN--------------GEVDKARRVFKGMKERD 302

Query: 174 TVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQ 233
              W++MI    +     +++ +F  M R G   L+  S+ +VL     +  L  G ++ 
Sbjct: 303 NGTWSAMIKVYERKGYELEALGLFRRMQREGLA-LNFPSLISVLSVCVSLASLDHGKQVH 361

Query: 234 CLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTE 293
              ++  F   +YV + L++ Y KCG + RA+ +F      D++  N+MI+GY+ +G  E
Sbjct: 362 AQLVRSEFDQDLYVASVLITMYVKCGNLVRAKQVFNRFPLKDVVMWNSMITGYSQHGLGE 421

Query: 294 SSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSV----- 348
            +L +F  + +S    +  T +G+           L+ C +S  +K G+    ++     
Sbjct: 422 EALNVFHDMCSSGVPPDDVTFIGV-----------LSACSYSGKVKEGLELFETMKCKYQ 470

Query: 349 -------LTALSTVYSRLNEMEAARKLFDE-SSEKSLASWNAMIAG---YTQNGLTEEAI 397
                     L  +  R +++  A KL ++   E     W A++     + +  L E A+
Sbjct: 471 VEPGIEHYACLVDLLGRADQVNEAMKLVEKMPMEPDAIVWGALLGACRTHMKLDLAEVAV 530

Query: 398 SLFQEMQASKVAP 410
               +++     P
Sbjct: 531 EKLAQLEPKNAGP 543


>gi|449434342|ref|XP_004134955.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g33760-like [Cucumis sativus]
          Length = 599

 Score =  471 bits (1212), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 223/546 (40%), Positives = 344/546 (63%), Gaps = 1/546 (0%)

Query: 240 GFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLF 299
           G H    +LT L+S     G +  A  LF  +  PD    ++++   +  G +  ++  +
Sbjct: 54  GLHRSRSLLTKLISLVCTAGSITYARRLFPTVPNPDSFLFDSLLKVTSKFGFSIDTVLFY 113

Query: 300 RQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRL 359
           R++L S    ++ T   +I        L L   IHS  +  G  S+  V  AL  +Y++ 
Sbjct: 114 RRMLFSGAPQSNYTFTSVIKACADLSALRLGKEIHSHVMVCGYGSDMYVQAALIALYAKA 173

Query: 360 NEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSIL 419
           ++M+ A+K+FD   ++++ +WN++I+GY QNGL +E+I LF  M  S   P+  T+ S+L
Sbjct: 174 SDMKVAKKVFDAMPQRTIIAWNSLISGYDQNGLPQESIGLFHLMMESGFQPDSATIVSLL 233

Query: 420 SACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEV 479
           S+C+QLGA+  G W+H+      F+ N+ + T+LI+MY +CGN+ +ARE+FD M  ++ V
Sbjct: 234 SSCSQLGALDFGCWLHDYADGNGFDLNVVLGTSLINMYTRCGNVSKAREVFDSMKERNVV 293

Query: 480 TWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSM 539
           TW  MISGYG+HG+G +A++LF+EM   G RP+ +TF++VL AC+H+GL+ +G  +F SM
Sbjct: 294 TWTAMISGYGMHGYGRQAMELFTEMRAYGPRPNNITFVAVLSACAHSGLIDDGRRVFSSM 353

Query: 540 IHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKG-LAVEPGPAVWGALLGACMIHKDTN 598
              +G  P  EH  CMVD+ GRAG L  A +FIK  +  EPGPAVW ++LGAC +H++ +
Sbjct: 354 KEAYGLVPGVEHNVCMVDMFGRAGLLNDAYQFIKKFIPKEPGPAVWTSMLGACRMHRNFD 413

Query: 599 LARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVG 658
           L    +E +  ++PEN G++V+LSNIY+      +   VR ++ +R+L K  G + IE+ 
Sbjct: 414 LGVKVAEHVLSVEPENPGHYVMLSNIYALAGRMDRVEMVRNMMTRRRLKKQVGYSTIEIN 473

Query: 659 GTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSE 718
              ++F+ GD+ HPQ+  IY  L++L  +  E+G+     + +HD+EEEE++  ++ HSE
Sbjct: 474 RKTYLFSMGDKSHPQTNTIYRYLDELMCRCSESGYVPAPESLMHDLEEEERDYALRYHSE 533

Query: 719 KLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVC 778
           KLA+AFGL+ T  G  IRI+KNLR+C DCH+A K IS +  R I+VRD  RFHHFK G C
Sbjct: 534 KLALAFGLLKTNQGETIRIVKNLRICEDCHSAIKHISIIADREIIVRDKFRFHHFKDGSC 593

Query: 779 SCGDYW 784
           SC DYW
Sbjct: 594 SCLDYW 599



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 136/479 (28%), Positives = 226/479 (47%), Gaps = 48/479 (10%)

Query: 14  SLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLF 73
           +LL+       L Q HA II+ G     S +TKL   +    +  YAR LF ++P PD F
Sbjct: 32  ALLRSGPRLRNLQQVHAHIIVSGLHRSRSLLTKLISLVCTAGSITYARRLFPTVPNPDSF 91

Query: 74  LFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGH 133
           LF+ +++  S       ++ FY  +  + A    N+T++ V+ A +      +G  +H H
Sbjct: 92  LFDSLLKVTSKFGFSIDTVLFYRRMLFSGA-PQSNYTFTSVIKACADLSALRLGKEIHSH 150

Query: 134 AIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDS 193
            +V GYGSD++V AAL+ LY K S +K A+KVFD MP++  + WNS+ISG  +N   Q+S
Sbjct: 151 VMVCGYGSDMYVQAALIALYAKASDMKVAKKVFDAMPQRTIIAWNSLISGYDQNGLPQES 210

Query: 194 IWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVS 253
           I +F  M+ + G   DS ++ ++L + +++  L  G  +       GF  +V + T L++
Sbjct: 211 IGLFHLMMES-GFQPDSATIVSLLSSCSQLGALDFGCWLHDYADGNGFDLNVVLGTSLIN 269

Query: 254 FYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSST 313
            Y++CG V +A  +F  +   ++++  AMISGY  +G    ++ LF ++ A   R N+ T
Sbjct: 270 MYTRCGNVSKAREVFDSMKERNVVTWTAMISGYGMHGYGRQAMELFTEMRAYGPRPNNIT 329

Query: 314 IVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESS 373
            V +           L+ C HS  +  G      V +++   Y  +  +E          
Sbjct: 330 FVAV-----------LSACAHSGLIDDG----RRVFSSMKEAYGLVPGVEHNV------- 367

Query: 374 EKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKW 433
                    M+  + + GL  +A    ++    +  P P   +S+L AC       LG  
Sbjct: 368 --------CMVDMFGRAGLLNDAYQFIKKFIPKE--PGPAVWTSMLGACRMHRNFDLGVK 417

Query: 434 VHELVKSRNFE--------SNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTM 484
           V E V S   E        SNIY     +D      N++  R L      K +V ++T+
Sbjct: 418 VAEHVLSVEPENPGHYVMLSNIYALAGRMDRVEMVRNMMTRRRL------KKQVGYSTI 470



 Score =  162 bits (410), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 101/365 (27%), Positives = 186/365 (50%), Gaps = 4/365 (1%)

Query: 130 LHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCC 189
           +H H IVSG      +   L+ L      +  AR++F  +P  D+ L++S++    K   
Sbjct: 46  VHAHIIVSGLHRSRSLLTKLISLVCTAGSITYARRLFPTVPNPDSFLFDSLLKVTSKFGF 105

Query: 190 FQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLT 249
             D++  +  M+ +G    + T   +V+ A A++  LRLG EI    +  G+   +YV  
Sbjct: 106 SIDTVLFYRRMLFSGAPQSNYT-FTSVIKACADLSALRLGKEIHSHVMVCGYGSDMYVQA 164

Query: 250 GLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERV 309
            L++ Y+K  +++ A+ +F  + +  +I+ N++ISGY  NG  + S+ LF  ++ S  + 
Sbjct: 165 ALIALYAKASDMKVAKKVFDAMPQRTIIAWNSLISGYDQNGLPQESIGLFHLMMESGFQP 224

Query: 310 NSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLF 369
           +S+TIV L+      G L     +H +   +G   N  + T+L  +Y+R   +  AR++F
Sbjct: 225 DSATIVSLLSSCSQLGALDFGCWLHDYADGNGFDLNVVLGTSLINMYTRCGNVSKAREVF 284

Query: 370 DESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAIS 429
           D   E+++ +W AMI+GY  +G   +A+ LF EM+A    PN +T  ++LSACA  G I 
Sbjct: 285 DSMKERNVVTWTAMISGYGMHGYGRQAMELFTEMRAYGPRPNNITFVAVLSACAHSGLID 344

Query: 430 LGKWVHELVK-SRNFESNIYVSTALIDMYAKCGNIVEARELFD--LMSHKSEVTWNTMIS 486
            G+ V   +K +      +  +  ++DM+ + G + +A +     +        W +M+ 
Sbjct: 345 DGRRVFSSMKEAYGLVPGVEHNVCMVDMFGRAGLLNDAYQFIKKFIPKEPGPAVWTSMLG 404

Query: 487 GYGLH 491
              +H
Sbjct: 405 ACRMH 409



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 81/299 (27%), Positives = 147/299 (49%), Gaps = 18/299 (6%)

Query: 333 IHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGL 392
           +H+  + SG+  + S+LT L ++      +  AR+LF          +++++   ++ G 
Sbjct: 46  VHAHIIVSGLHRSRSLLTKLISLVCTAGSITYARRLFPTVPNPDSFLFDSLLKVTSKFGF 105

Query: 393 TEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTA 452
           + + +  ++ M  S    +  T +S++ ACA L A+ LGK +H  V    + S++YV  A
Sbjct: 106 SIDTVLFYRRMLFSGAPQSNYTFTSVIKACADLSALRLGKEIHSHVMVCGYGSDMYVQAA 165

Query: 453 LIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPS 512
           LI +YAK  ++  A+++FD M  ++ + WN++ISGY  +G   E++ LF  M+ SG +P 
Sbjct: 166 LIALYAKASDMKVAKKVFDAMPQRTIIAWNSLISGYDQNGLPQESIGLFHLMMESGFQPD 225

Query: 513 GVTFLSVLYACSHAGLVREGDEIFQSMIHDH----GFKPLAEHYACMVDILGRAGQLEKA 568
             T +S+L +CS  G +      F   +HD+    GF         ++++  R G + KA
Sbjct: 226 SATIVSLLSSCSQLGALD-----FGCWLHDYADGNGFDLNVVLGTSLINMYTRCGNVSKA 280

Query: 569 LEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFEL-----DPENVGYHVLLS 622
            E    +  E     W A++    +H      R A E   E+      P N+ +  +LS
Sbjct: 281 REVFDSMK-ERNVVTWTAMISGYGMH---GYGRQAMELFTEMRAYGPRPNNITFVAVLS 335


>gi|449479601|ref|XP_004155648.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g33760-like [Cucumis sativus]
          Length = 663

 Score =  471 bits (1211), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 223/546 (40%), Positives = 344/546 (63%), Gaps = 1/546 (0%)

Query: 240 GFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLF 299
           G H    +LT L+S     G +  A  LF  +  PD    ++++   +  G +  ++  +
Sbjct: 118 GLHRSRSLLTKLISLVCTAGSITYARRLFPTVPNPDSFLFDSLLKVTSKFGFSIDTVLFY 177

Query: 300 RQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRL 359
           R++L S    ++ T   +I        L L   IHS  +  G  S+  V  AL  +Y++ 
Sbjct: 178 RRMLFSGAPQSNYTFTSVIKACADLSALRLGKEIHSHVMVCGYGSDMYVQAALIALYAKA 237

Query: 360 NEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSIL 419
           ++M+ A+K+FD   ++++ +WN++I+GY QNGL +E+I LF  M  S   P+  T+ S+L
Sbjct: 238 SDMKVAKKVFDAMPQRTIIAWNSLISGYDQNGLPQESIGLFHLMMESGFQPDSATIVSLL 297

Query: 420 SACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEV 479
           S+C+QLGA+  G W+H+      F+ N+ + T+LI+MY +CGN+ +ARE+FD M  ++ V
Sbjct: 298 SSCSQLGALDFGCWLHDYADGNGFDLNVVLGTSLINMYTRCGNVSKAREVFDSMKERNVV 357

Query: 480 TWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSM 539
           TW  MISGYG+HG+G +A++LF+EM   G RP+ +TF++VL AC+H+GL+ +G  +F SM
Sbjct: 358 TWTAMISGYGMHGYGRQAMELFTEMRAYGPRPNNITFVAVLSACAHSGLIDDGRRVFSSM 417

Query: 540 IHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKG-LAVEPGPAVWGALLGACMIHKDTN 598
              +G  P  EH  CMVD+ GRAG L  A +FIK  +  EPGPAVW ++LGAC +H++ +
Sbjct: 418 KEAYGLVPGVEHNVCMVDMFGRAGLLNDAYQFIKKFIPKEPGPAVWTSMLGACRMHRNFD 477

Query: 599 LARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVG 658
           L    +E +  ++PEN G++V+LSNIY+      +   VR ++ +R+L K  G + IE+ 
Sbjct: 478 LGVKVAEHVLSVEPENPGHYVMLSNIYALAGRMDRVEMVRNMMTRRRLKKQVGYSTIEIN 537

Query: 659 GTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSE 718
              ++F+ GD+ HPQ+  IY  L++L  +  E+G+     + +HD+EEEE++  ++ HSE
Sbjct: 538 RKTYLFSMGDKSHPQTNTIYRYLDELMCRCSESGYVPAPESLMHDLEEEERDYALRYHSE 597

Query: 719 KLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVC 778
           KLA+AFGL+ T  G  IRI+KNLR+C DCH+A K IS +  R I+VRD  RFHHFK G C
Sbjct: 598 KLALAFGLLKTNQGETIRIVKNLRICEDCHSAIKHISIIADREIIVRDKFRFHHFKDGSC 657

Query: 779 SCGDYW 784
           SC DYW
Sbjct: 658 SCLDYW 663



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 136/479 (28%), Positives = 226/479 (47%), Gaps = 48/479 (10%)

Query: 14  SLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLF 73
           +LL+       L Q HA II+ G     S +TKL   +    +  YAR LF ++P PD F
Sbjct: 96  ALLRSGPRLRNLQQVHAHIIVSGLHRSRSLLTKLISLVCTAGSITYARRLFPTVPNPDSF 155

Query: 74  LFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGH 133
           LF+ +++  S       ++ FY  +  + A    N+T++ V+ A +      +G  +H H
Sbjct: 156 LFDSLLKVTSKFGFSIDTVLFYRRMLFSGA-PQSNYTFTSVIKACADLSALRLGKEIHSH 214

Query: 134 AIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDS 193
            +V GYGSD++V AAL+ LY K S +K A+KVFD MP++  + WNS+ISG  +N   Q+S
Sbjct: 215 VMVCGYGSDMYVQAALIALYAKASDMKVAKKVFDAMPQRTIIAWNSLISGYDQNGLPQES 274

Query: 194 IWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVS 253
           I +F  M+ + G   DS ++ ++L + +++  L  G  +       GF  +V + T L++
Sbjct: 275 IGLFHLMMES-GFQPDSATIVSLLSSCSQLGALDFGCWLHDYADGNGFDLNVVLGTSLIN 333

Query: 254 FYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSST 313
            Y++CG V +A  +F  +   ++++  AMISGY  +G    ++ LF ++ A   R N+ T
Sbjct: 334 MYTRCGNVSKAREVFDSMKERNVVTWTAMISGYGMHGYGRQAMELFTEMRAYGPRPNNIT 393

Query: 314 IVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESS 373
            V +           L+ C HS  +  G      V +++   Y  +  +E          
Sbjct: 394 FVAV-----------LSACAHSGLIDDG----RRVFSSMKEAYGLVPGVEHNV------- 431

Query: 374 EKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKW 433
                    M+  + + GL  +A    ++    +  P P   +S+L AC       LG  
Sbjct: 432 --------CMVDMFGRAGLLNDAYQFIKKFIPKE--PGPAVWTSMLGACRMHRNFDLGVK 481

Query: 434 VHELVKSRNFE--------SNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTM 484
           V E V S   E        SNIY     +D      N++  R L      K +V ++T+
Sbjct: 482 VAEHVLSVEPENPGHYVMLSNIYALAGRMDRVEMVRNMMTRRRL------KKQVGYSTI 534



 Score =  162 bits (410), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 101/365 (27%), Positives = 186/365 (50%), Gaps = 4/365 (1%)

Query: 130 LHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCC 189
           +H H IVSG      +   L+ L      +  AR++F  +P  D+ L++S++    K   
Sbjct: 110 VHAHIIVSGLHRSRSLLTKLISLVCTAGSITYARRLFPTVPNPDSFLFDSLLKVTSKFGF 169

Query: 190 FQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLT 249
             D++  +  M+ +G    + T   +V+ A A++  LRLG EI    +  G+   +YV  
Sbjct: 170 SIDTVLFYRRMLFSGAPQSNYT-FTSVIKACADLSALRLGKEIHSHVMVCGYGSDMYVQA 228

Query: 250 GLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERV 309
            L++ Y+K  +++ A+ +F  + +  +I+ N++ISGY  NG  + S+ LF  ++ S  + 
Sbjct: 229 ALIALYAKASDMKVAKKVFDAMPQRTIIAWNSLISGYDQNGLPQESIGLFHLMMESGFQP 288

Query: 310 NSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLF 369
           +S+TIV L+      G L     +H +   +G   N  + T+L  +Y+R   +  AR++F
Sbjct: 289 DSATIVSLLSSCSQLGALDFGCWLHDYADGNGFDLNVVLGTSLINMYTRCGNVSKAREVF 348

Query: 370 DESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAIS 429
           D   E+++ +W AMI+GY  +G   +A+ LF EM+A    PN +T  ++LSACA  G I 
Sbjct: 349 DSMKERNVVTWTAMISGYGMHGYGRQAMELFTEMRAYGPRPNNITFVAVLSACAHSGLID 408

Query: 430 LGKWVHELVK-SRNFESNIYVSTALIDMYAKCGNIVEARELFD--LMSHKSEVTWNTMIS 486
            G+ V   +K +      +  +  ++DM+ + G + +A +     +        W +M+ 
Sbjct: 409 DGRRVFSSMKEAYGLVPGVEHNVCMVDMFGRAGLLNDAYQFIKKFIPKEPGPAVWTSMLG 468

Query: 487 GYGLH 491
              +H
Sbjct: 469 ACRMH 473



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 81/299 (27%), Positives = 147/299 (49%), Gaps = 18/299 (6%)

Query: 333 IHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGL 392
           +H+  + SG+  + S+LT L ++      +  AR+LF          +++++   ++ G 
Sbjct: 110 VHAHIIVSGLHRSRSLLTKLISLVCTAGSITYARRLFPTVPNPDSFLFDSLLKVTSKFGF 169

Query: 393 TEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTA 452
           + + +  ++ M  S    +  T +S++ ACA L A+ LGK +H  V    + S++YV  A
Sbjct: 170 SIDTVLFYRRMLFSGAPQSNYTFTSVIKACADLSALRLGKEIHSHVMVCGYGSDMYVQAA 229

Query: 453 LIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPS 512
           LI +YAK  ++  A+++FD M  ++ + WN++ISGY  +G   E++ LF  M+ SG +P 
Sbjct: 230 LIALYAKASDMKVAKKVFDAMPQRTIIAWNSLISGYDQNGLPQESIGLFHLMMESGFQPD 289

Query: 513 GVTFLSVLYACSHAGLVREGDEIFQSMIHDH----GFKPLAEHYACMVDILGRAGQLEKA 568
             T +S+L +CS  G +      F   +HD+    GF         ++++  R G + KA
Sbjct: 290 SATIVSLLSSCSQLGALD-----FGCWLHDYADGNGFDLNVVLGTSLINMYTRCGNVSKA 344

Query: 569 LEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFEL-----DPENVGYHVLLS 622
            E    +  E     W A++    +H      R A E   E+      P N+ +  +LS
Sbjct: 345 REVFDSMK-ERNVVTWTAMISGYGMH---GYGRQAMELFTEMRAYGPRPNNITFVAVLS 399


>gi|356577722|ref|XP_003556972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like [Glycine max]
          Length = 820

 Score =  470 bits (1209), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 258/720 (35%), Positives = 418/720 (58%), Gaps = 7/720 (0%)

Query: 69  KPDLFLFNVIIRGFSNNEMPKSSICFYTHLRK--NTALTPDNFTYSFVLSAASACCDRSI 126
           K DL  ++ II  F+NN M   ++  + H+ +     + P+ + ++ +L + S     + 
Sbjct: 104 KRDLVSWSAIISCFANNSMESRALLTFLHMLQCSRNIIYPNEYCFTALLRSCSNPLFFTT 163

Query: 127 GVLLHGHAIVSGY-GSDLFVGAALVDLYFKFSW-VKSARKVFDKMPEKDTVLWNSMISGL 184
           G+ +    + +GY  S + VG AL+D++ K    ++SAR VFDKM  K+ V W  MI+  
Sbjct: 164 GLAIFAFLLKTGYFDSHVCVGCALIDMFTKGGLDIQSARMVFDKMQHKNLVTWTLMITRY 223

Query: 185 MKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDH 244
            +     D++ +F  ++ +  T  D  ++ ++L A  E++   LG ++    ++ G    
Sbjct: 224 SQLGLLDDAVDLFCRLLVSEYT-PDKFTLTSLLSACVELEFFSLGKQLHSWVIRSGLASD 282

Query: 245 VYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLA 304
           V+V   LV  Y+K   VE +  +F  ++  +++S  A+ISGY  + + + +++LF  +L 
Sbjct: 283 VFVGCTLVDMYAKSAAVENSRKIFNTMLHHNVMSWTALISGYVQSRQEQEAIKLFCNMLH 342

Query: 305 SAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEA 364
                N  T   ++          +   +H   +K G+ + + V  +L  +Y+R   ME 
Sbjct: 343 GHVTPNCFTFSSVLKACASLPDFGIGKQLHGQTIKLGLSTINCVGNSLINMYARSGTMEC 402

Query: 365 ARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQ 424
           ARK F+   EK+L S+N       +   ++E+ +   E++ + V  +P T + +LS  A 
Sbjct: 403 ARKAFNILFEKNLISYNTAADANAKALDSDESFN--HEVEHTGVGASPFTYACLLSGAAC 460

Query: 425 LGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTM 484
           +G I  G+ +H L+    F +N+ ++ ALI MY+KCGN   A ++F+ M +++ +TW ++
Sbjct: 461 IGTIVKGEQIHALIVKSGFGTNLCINNALISMYSKCGNKEAALQVFNDMGYRNVITWTSI 520

Query: 485 ISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHG 544
           ISG+  HG   +AL+LF EML  G++P+ VT+++VL ACSH GL+ E  + F SM ++H 
Sbjct: 521 ISGFAKHGFATKALELFYEMLEIGVKPNEVTYIAVLSACSHVGLIDEAWKHFNSMHYNHS 580

Query: 545 FKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVAS 604
             P  EHYACMVD+LGR+G L +A+EFI  +  +    VW   LG+C +H++T L   A+
Sbjct: 581 ISPRMEHYACMVDLLGRSGLLLEAIEFINSMPFDADALVWRTFLGSCRVHRNTKLGEHAA 640

Query: 605 EKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVF 664
           +K+ E +P +   ++LLSN+Y++E  +   A +R+ +K++KL K  G + IEV    H F
Sbjct: 641 KKILEREPHDPATYILLSNLYASEGRWDDVAALRKSMKQKKLIKETGYSWIEVDNQVHKF 700

Query: 665 TSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAF 724
             GD  HPQ+  IY  L++L  K++  G+   T   LHDVE+E+KE  +  HSEK+A+A+
Sbjct: 701 HVGDTSHPQARKIYDELDELALKIKNLGYIPNTDFVLHDVEDEQKEQYLFQHSEKIAVAY 760

Query: 725 GLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
            LI+T     IR+ KNLRVC DCHTA K+IS VTGR IVVRDANRFHH K G CSC DYW
Sbjct: 761 ALISTPKPKPIRVFKNLRVCGDCHTAIKYISIVTGREIVVRDANRFHHIKDGKCSCNDYW 820



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 98/290 (33%), Positives = 162/290 (55%), Gaps = 17/290 (5%)

Query: 247 VLTGLVSFYSKCGEVERAELLFRDIV--RPDLISCNAMISGYTCNGKTESSLRLFRQLLA 304
           +L  L++ YSKCG+ E A  +FR++   + DL+S +A+IS +  N     +L  F  +L 
Sbjct: 76  LLNSLITLYSKCGDWENALSIFRNMGHHKRDLVSWSAIISCFANNSMESRALLTFLHMLQ 135

Query: 305 SAERV---NSSTIVGLI-----PVFYPFGHLHLTNCIHSFCLKSGIV-SNSSVLTALSTV 355
            +  +   N      L+     P+F+  G       I +F LK+G   S+  V  AL  +
Sbjct: 136 CSRNIIYPNEYCFTALLRSCSNPLFFTTGL-----AIFAFLLKTGYFDSHVCVGCALIDM 190

Query: 356 YSRLN-EMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVT 414
           +++   ++++AR +FD+   K+L +W  MI  Y+Q GL ++A+ LF  +  S+  P+  T
Sbjct: 191 FTKGGLDIQSARMVFDKMQHKNLVTWTLMITRYSQLGLLDDAVDLFCRLLVSEYTPDKFT 250

Query: 415 VSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMS 474
           ++S+LSAC +L   SLGK +H  V      S+++V   L+DMYAK   +  +R++F+ M 
Sbjct: 251 LTSLLSACVELEFFSLGKQLHSWVIRSGLASDVFVGCTLVDMYAKSAAVENSRKIFNTML 310

Query: 475 HKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACS 524
           H + ++W  +ISGY       EA++LF  MLH  + P+  TF SVL AC+
Sbjct: 311 HHNVMSWTALISGYVQSRQEQEAIKLFCNMLHGHVTPNCFTFSSVLKACA 360



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 78/271 (28%), Positives = 133/271 (49%), Gaps = 9/271 (3%)

Query: 325 GHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESS--EKSLASWNA 382
           G+L L   +H   + SG+  +S +L +L T+YS+  + E A  +F      ++ L SW+A
Sbjct: 53  GNLELGKLLHHKLIDSGLPLDSVLLNSLITLYSKCGDWENALSIFRNMGHHKRDLVSWSA 112

Query: 383 MIAGYTQNGLTEEAISLFQEM-QASK--VAPNPVTVSSILSACAQLGAISLGKWVHE-LV 438
           +I+ +  N +   A+  F  M Q S+  + PN    +++L +C+     + G  +   L+
Sbjct: 113 IISCFANNSMESRALLTFLHMLQCSRNIIYPNEYCFTALLRSCSNPLFFTTGLAIFAFLL 172

Query: 439 KSRNFESNIYVSTALIDMYAKCG-NIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEA 497
           K+  F+S++ V  ALIDM+ K G +I  AR +FD M HK+ VTW  MI+ Y   G   +A
Sbjct: 173 KTGYFDSHVCVGCALIDMFTKGGLDIQSARMVFDKMQHKNLVTWTLMITRYSQLGLLDDA 232

Query: 498 LQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVD 557
           + LF  +L S   P   T  S+L AC        G ++   +I   G          +VD
Sbjct: 233 VDLFCRLLVSEYTPDKFTLTSLLSACVELEFFSLGKQLHSWVIRS-GLASDVFVGCTLVD 291

Query: 558 ILGRAGQLEKALEFIKGLAVEPGPAVWGALL 588
           +  ++  +E + +    + +      W AL+
Sbjct: 292 MYAKSAAVENSRKIFNTM-LHHNVMSWTALI 321



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/159 (26%), Positives = 73/159 (45%), Gaps = 6/159 (3%)

Query: 411 NPVTVSSIL-SACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEAREL 469
           +P+  SS+L  AC + G + LGK +H  +       +  +  +LI +Y+KCG+   A  +
Sbjct: 37  SPLIKSSLLLKACIRSGNLELGKLLHHKLIDSGLPLDSVLLNSLITLYSKCGDWENALSI 96

Query: 470 FDLMSH--KSEVTWNTMISGYGLHGHGLEALQLFSEMLHSG---IRPSGVTFLSVLYACS 524
           F  M H  +  V+W+ +IS +  +     AL  F  ML      I P+   F ++L +CS
Sbjct: 97  FRNMGHHKRDLVSWSAIISCFANNSMESRALLTFLHMLQCSRNIIYPNEYCFTALLRSCS 156

Query: 525 HAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAG 563
           +      G  IF  ++    F         ++D+  + G
Sbjct: 157 NPLFFTTGLAIFAFLLKTGYFDSHVCVGCALIDMFTKGG 195


>gi|115455659|ref|NP_001051430.1| Os03g0775400 [Oryza sativa Japonica Group]
 gi|24899461|gb|AAN65031.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|108711328|gb|ABF99123.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|113549901|dbj|BAF13344.1| Os03g0775400 [Oryza sativa Japonica Group]
 gi|215741536|dbj|BAG98031.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 804

 Score =  470 bits (1209), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 261/709 (36%), Positives = 386/709 (54%), Gaps = 67/709 (9%)

Query: 142 DLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMV 201
           ++F   +L+ ++ K   +  AR VF +MPE+D V W  M+ GL +   F ++I    DM 
Sbjct: 97  NVFTWNSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMT 156

Query: 202 RNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEV 261
            +G T    T +  VL + A  Q   +G ++    +KLG    V V   +++ Y KCG+ 
Sbjct: 157 ADGFTPTQFT-LTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDS 215

Query: 262 ERAELLF-RDIVR----------------------------PD--LISCNAMISGYTCNG 290
           E A  +F R  VR                            PD  ++S NAMI+GY  NG
Sbjct: 216 ETATTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNG 275

Query: 291 KTESSLRLFRQLL-ASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVL 349
               +L+LF ++L  S+   +  TI  ++      G++ +   +H++ L++ +  NS V 
Sbjct: 276 LDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVT 335

Query: 350 TALSTVYSRLNEMEAARKLFDESSE---------------------------------KS 376
            AL + Y++   +E AR++ D+S E                                 + 
Sbjct: 336 NALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRD 395

Query: 377 LASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHE 436
           + +W AMI GY QNG  +EAI LF+ M      PN  T++++LS CA L  +  GK +H 
Sbjct: 396 VVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHC 455

Query: 437 LVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSE-VTWNTMISGYGLHGHGL 495
                  E +  VS A+I MYA+ G+   AR +FD +  + E +TW +MI     HG G 
Sbjct: 456 RAIRSLLEQSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGE 515

Query: 496 EALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACM 555
           EA+ LF EML +G+ P  +T++ VL ACSHAG V EG   +  + ++H   P   HYACM
Sbjct: 516 EAVGLFEEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACM 575

Query: 556 VDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENV 615
           VD+L RAG   +A EFI+ + VEP    WG+LL AC +HK+  LA +A+EKL  +DP N 
Sbjct: 576 VDLLARAGLFSEAQEFIRRMPVEPDAIAWGSLLSACRVHKNAELAELAAEKLLSIDPNNS 635

Query: 616 GYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQST 675
           G +  ++N+YSA   +  AA + +  K++ + K  G +   +    HVF + D +HPQ  
Sbjct: 636 GAYSAIANVYSACGRWSDAARIWKARKEKAVRKETGFSWTHIRSKIHVFGADDVVHPQRD 695

Query: 676 AIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEI 735
           A+YAM  ++  +++ AGF  +  + LHDV++E KE ++  HSEKLAIAFGLI+T   T +
Sbjct: 696 AVYAMAARMWEEIKGAGFVPDLQSVLHDVDDELKEELLSRHSEKLAIAFGLISTPEKTTL 755

Query: 736 RIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           R++KNLRVC DCH A K ISKVT R I+VRDA RFHHF+ G+CSC DYW
Sbjct: 756 RVMKNLRVCNDCHAAIKAISKVTDREIIVRDATRFHHFRDGLCSCKDYW 804



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 131/541 (24%), Positives = 240/541 (44%), Gaps = 76/541 (14%)

Query: 39  NDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHL 98
           N L ++   + RL+D      AR +F  +P+ D   + V++ G +       +I     +
Sbjct: 102 NSLLSMFAKSGRLAD------ARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDM 155

Query: 99  RKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSW 158
             +   TP  FT + VLS+ +     ++G  +H   +  G GS + V  +++++Y K   
Sbjct: 156 TAD-GFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGD 214

Query: 159 VKSARKVFDK-------------------------------MPEKDTVLWNSMISGLMKN 187
            ++A  VF++                               MP++  V WN+MI+G  +N
Sbjct: 215 SETATTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQN 274

Query: 188 CCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYV 247
                ++ +F  M+       D  ++ +VL A A +  +R+G ++    L+     +  V
Sbjct: 275 GLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQV 334

Query: 248 LTGLVSFYSKCGEVERAELLFRDIVRPDL------------------------------- 276
              L+S Y+K G VE A  +    +  DL                               
Sbjct: 335 TNALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNR 394

Query: 277 --ISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIH 334
             ++  AMI GY  NG+ + ++ LFR ++      NS T+  ++ V      L     IH
Sbjct: 395 DVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIH 454

Query: 335 SFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESS-EKSLASWNAMIAGYTQNGLT 393
              ++S +  +SSV  A+ T+Y+R      AR++FD+    K   +W +MI    Q+G  
Sbjct: 455 CRAIRSLLEQSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQG 514

Query: 394 EEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRN-FESNIYVSTA 452
           EEA+ LF+EM  + V P+ +T   +LSAC+  G ++ GK  ++ +K+ +     +     
Sbjct: 515 EEAVGLFEEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYAC 574

Query: 453 LIDMYAKCGNIVEARELFDLMSHKSE-VTWNTMISGYGLHGHGLEALQLFSEMLHSGIRP 511
           ++D+ A+ G   EA+E    M  + + + W +++S   +H +  E  +L +E L S I P
Sbjct: 575 MVDLLARAGLFSEAQEFIRRMPVEPDAIAWGSLLSACRVHKNA-ELAELAAEKLLS-IDP 632

Query: 512 S 512
           +
Sbjct: 633 N 633



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 104/453 (22%), Positives = 196/453 (43%), Gaps = 71/453 (15%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           A +LF S+P   +  +N +I G++ N +   ++  ++ +   +++ PD FT + VLSA +
Sbjct: 249 AESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACA 308

Query: 120 ACCDRSIGVLLHGH--------------AIVSGYG-----------------SDLFVGA- 147
              +  IG  +H +              A++S Y                  +DL V + 
Sbjct: 309 NLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQSMETDLNVISF 368

Query: 148 -ALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGT 206
            AL++ Y K   ++SAR++F  M  +D V W +MI G  +N    ++I +F  M+   G 
Sbjct: 369 TALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMI-TCGP 427

Query: 207 WLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAEL 266
             +S ++AAVL   A +  L  G +I C  ++        V   +++ Y++ G    A  
Sbjct: 428 EPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLEQSSSVSNAIITMYARSGSFPWARR 487

Query: 267 LFRDIV-RPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFG 325
           +F  +  R + I+  +MI     +G+ E ++ LF ++L +    +  T VG+        
Sbjct: 488 MFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDRITYVGV-------- 539

Query: 326 HLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRL-NEMEAARKLFDESSEKSLASWNAMI 384
              L+ C H+  +  G              Y ++ NE + A           ++ +  M+
Sbjct: 540 ---LSACSHAGFVNEG-----------KRYYDQIKNEHQIA---------PEMSHYACMV 576

Query: 385 AGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFE 444
               + GL  EA    + M    V P+ +   S+LSAC       L +   E + S +  
Sbjct: 577 DLLARAGLFSEAQEFIRRM---PVEPDAIAWGSLLSACRVHKNAELAELAAEKLLSID-P 632

Query: 445 SNIYVSTALIDMYAKCGNIVEARELFDLMSHKS 477
           +N    +A+ ++Y+ CG   +A  ++     K+
Sbjct: 633 NNSGAYSAIANVYSACGRWSDAARIWKARKEKA 665



 Score = 39.3 bits (90), Expect = 8.9,   Method: Compositional matrix adjust.
 Identities = 31/138 (22%), Positives = 59/138 (42%), Gaps = 11/138 (7%)

Query: 416 SSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAK----CGNIVEARELFD 471
           + +L  C        G+ +H         ++ Y+   L+  Y +     G + +AR LFD
Sbjct: 30  ARLLQLCQTAANPGAGRAIHARAVKAGLLASAYLCNNLLSYYGETAGGAGGLRDARRLFD 89

Query: 472 --LMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLV 529
              ++ ++  TWN+++S +   G   +A  +F+EM         V++  ++   + AG  
Sbjct: 90  EIPLARRNVFTWNSLLSMFAKSGRLADARGVFAEMPER----DAVSWTVMVVGLNRAGRF 145

Query: 530 REGDEIFQSMIHDHGFKP 547
            E  +    M  D GF P
Sbjct: 146 GEAIKTLLDMTAD-GFTP 162


>gi|449458534|ref|XP_004147002.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g09950-like [Cucumis sativus]
          Length = 989

 Score =  470 bits (1209), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 264/762 (34%), Positives = 403/762 (52%), Gaps = 10/762 (1%)

Query: 27  QTHAQIIIHGFQNDLSTVTKLAHRLSDFKATC----YARALFFSIPKPDLFLFNVIIRGF 82
           Q HAQ    G   DL   + L     D  A C     A  +F  +P+ +   +NV++ G+
Sbjct: 234 QMHAQAFKLGLLLDLFVGSALV----DLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGY 289

Query: 83  SNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSD 142
           +        +  +  + +   +  + FT + VL   +   +   G ++H   I  GY  +
Sbjct: 290 AQRGDVTGVLKLFCSMME-LDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGN 348

Query: 143 LFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVR 202
            F+G  LVD+Y K      A  VF  + + D V+W+++I+ L +    ++SI +F  ++R
Sbjct: 349 EFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLF-HLMR 407

Query: 203 NGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVE 262
            G T  +  ++ ++L A      L+ G  I     K GF   V V   LV+ Y K G V 
Sbjct: 408 LGDTLPNQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVH 467

Query: 263 RAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFY 322
               L+  +V  DLIS NA +SG    G  +  L +F  +L      N  T + ++    
Sbjct: 468 DGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCS 527

Query: 323 PFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNA 382
               +H    +H+  +K+ +  N+ V TAL  +Y++   +E A   F+  S + L +W  
Sbjct: 528 CLFDVHYGRQVHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDADVAFNRLSVRDLFTWTV 587

Query: 383 MIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRN 442
           +I  Y Q    E+A++ F++MQ   V PN  T++  LS C+ L ++  G+ +H +V    
Sbjct: 588 IITNYAQTNQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASLEGGQQLHSMVFKSG 647

Query: 443 FESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFS 502
             S+++V +AL+DMYAKCG + EA  LF+ +  +  + WNT+I GY  +G G +AL  F 
Sbjct: 648 HVSDMFVGSALVDMYAKCGCMEEAEALFEALIRRDTIAWNTIICGYAQNGQGNKALTAFR 707

Query: 503 EMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRA 562
            ML  GI P GVTF  +L ACSH GLV EG E F SM  D G  P  +H ACMVDILGR 
Sbjct: 708 MMLDEGISPDGVTFTGILSACSHQGLVEEGKEHFNSMYRDFGISPTVDHCACMVDILGRV 767

Query: 563 GQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLS 622
           G+ ++  +FI+ + +     +W  +LGA  +H +  L   A+ KLFEL PE    ++LLS
Sbjct: 768 GKFDELEDFIQKMQLSQNALIWETVLGASKMHNNLVLGEKAANKLFELQPEEESSYILLS 827

Query: 623 NIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLE 682
           NI++ E  +     VR ++  + + K PGC+ +E  G  H F S D  HPQ   I+  L+
Sbjct: 828 NIFATEGRWDDVKRVRSLMSSKGVKKEPGCSWVEANGQVHTFVSHDYSHPQIQEIHLKLD 887

Query: 683 KLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLR 742
           +L+ ++    +  +T   LH+V E EK+  ++ HSE+LA+ F LI+T    +IRI KNLR
Sbjct: 888 ELDRELASIQYVPKTEYVLHNVGETEKKENLRFHSERLALGFALISTSSEKKIRIFKNLR 947

Query: 743 VCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           +C DCH   K IS +T + IVVRD  RFHHFK G CSC D+W
Sbjct: 948 ICRDCHDVMKHISSITNQEIVVRDVRRFHHFKNGACSCNDFW 989



 Score =  241 bits (616), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 164/596 (27%), Positives = 278/596 (46%), Gaps = 6/596 (1%)

Query: 29  HAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNEMP 88
           H  I+      D      L +  +  + + YAR +   +P  D+  +  +I+G       
Sbjct: 135 HGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMPDRDVVSWTALIQGLVAEGFA 194

Query: 89  KSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAA 148
             SI  +  + +N  + P+ FT +  L A S C    +G  +H  A   G   DLFVG+A
Sbjct: 195 NDSIYLFQEM-QNEGIMPNEFTLATGLKACSLCMALDLGKQMHAQAFKLGLLLDLFVGSA 253

Query: 149 LVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWL 208
           LVDLY K   ++ A K+F  MPE++ V WN +++G  +       + +F  M+       
Sbjct: 254 LVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGDVTGVLKLFCSMME-LDVKC 312

Query: 209 DSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLF 268
           +  ++  VL   A  + L+ G  I  L +K G+  + ++  GLV  YSKCG    A  +F
Sbjct: 313 NEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCGLVDMYSKCGLAIDAIGVF 372

Query: 269 RDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLH 328
           + I +PD++  +A+I+     G++E S++LF  +       N  TI  L+      G+L 
Sbjct: 373 KTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPNQYTICSLLSAATNTGNLQ 432

Query: 329 LTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYT 388
               IH+   K G  ++ +V  AL T+Y +   +    KL++   ++ L SWNA ++G  
Sbjct: 433 YGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYESMVDRDLISWNAYLSGLH 492

Query: 389 QNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIY 448
             G+ +  +++F  M      PN  T  SIL +C+ L  +  G+ VH  +     + N +
Sbjct: 493 DCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVHYGRQVHAHIIKNQLDDNNF 552

Query: 449 VSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSG 508
           V TALIDMYAKC  + +A   F+ +S +   TW  +I+ Y     G +AL  F +M   G
Sbjct: 553 VCTALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQMQQEG 612

Query: 509 IRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKA 568
           ++P+  T    L  CS    + EG +   SM+   G        + +VD+  + G +E+A
Sbjct: 613 VKPNEFTLAGCLSGCSSLASL-EGGQQLHSMVFKSGHVSDMFVGSALVDMYAKCGCMEEA 671

Query: 569 LEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFE--LDPENVGYHVLLS 622
               + L +      W  ++     +   N A  A   + +  + P+ V +  +LS
Sbjct: 672 EALFEAL-IRRDTIAWNTIICGYAQNGQGNKALTAFRMMLDEGISPDGVTFTGILS 726



 Score =  198 bits (504), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 134/453 (29%), Positives = 223/453 (49%), Gaps = 16/453 (3%)

Query: 124 RSIGVL--LHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMI 181
           RS+GV   +HG  +      D  +  +LV++Y K  +   AR V  KMP++D V W ++I
Sbjct: 126 RSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMPDRDVVSWTALI 185

Query: 182 SGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGF 241
            GL+      DSI++F +M +N G   +  ++A  L A +    L LG ++     KLG 
Sbjct: 186 QGLVAEGFANDSIYLFQEM-QNEGIMPNEFTLATGLKACSLCMALDLGKQMHAQAFKLGL 244

Query: 242 HDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQ 301
              ++V + LV  Y+KCGE+E A  +F  +   + ++ N +++GY   G     L+LF  
Sbjct: 245 LLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGDVTGVLKLFCS 304

Query: 302 LLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNE 361
           ++    + N  T+  ++       +L     IHS  +K G   N  +   L  +YS+   
Sbjct: 305 MMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCGLVDMYSKCGL 364

Query: 362 MEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSA 421
              A  +F    +  +  W+A+I    Q G +EE+I LF  M+     PN  T+ S+LSA
Sbjct: 365 AIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPNQYTICSLLSA 424

Query: 422 CAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTW 481
               G +  G+ +H  V    FE+++ VS AL+ MY K G + +  +L++ M  +  ++W
Sbjct: 425 ATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYESMVDRDLISW 484

Query: 482 NTMISGYGLHGHGL--EALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDE----I 535
           N  +S  GLH  G+    L +F  ML  G  P+  TF+S+L +CS    V  G +    I
Sbjct: 485 NAYLS--GLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVHYGRQVHAHI 542

Query: 536 FQSMIHDHGFKPLAEHYACMVDILGRAGQLEKA 568
            ++ + D+ F   A     ++D+  +   LE A
Sbjct: 543 IKNQLDDNNFVCTA-----LIDMYAKCMYLEDA 570



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 48/179 (26%), Positives = 84/179 (46%), Gaps = 10/179 (5%)

Query: 416 SSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSH 475
           SS+L  CA   ++ + K +H L+       + ++  +L+++YAKC     AR +   M  
Sbjct: 116 SSMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMPD 175

Query: 476 KSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEI 535
           +  V+W  +I G    G   +++ LF EM + GI P+  T  + L ACS    +  G + 
Sbjct: 176 RDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQ- 234

Query: 536 FQSMIHDHGFK--PLAEHY--ACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGA 590
               +H   FK   L + +  + +VD+  + G++E A +   G+  E     W  LL  
Sbjct: 235 ----MHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMP-EQNDVTWNVLLNG 288


>gi|225425668|ref|XP_002269694.1| PREDICTED: pentatricopeptide repeat-containing protein At2g02980
           [Vitis vinifera]
 gi|296086362|emb|CBI31951.3| unnamed protein product [Vitis vinifera]
          Length = 595

 Score =  470 bits (1209), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 244/583 (41%), Positives = 351/583 (60%), Gaps = 13/583 (2%)

Query: 209 DSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYS---KCGEVERAE 265
           ++T   ++LP    ++EL+   ++Q   +K   H  + VLT  ++F S       ++ A 
Sbjct: 19  NTTHPLSLLPKCTSLRELK---QLQAFAIKTHLHSDLSVLTKFINFCSLNPTTTSMQHAH 75

Query: 266 LLFRDIVRPDLISCNAMISGYTCNGKTESSLR---LFRQLLASAERVNSSTIVGLIPVFY 322
            LF  I +PD++  N M  GY    +T++ LR   LF Q+L S    +  T   L+    
Sbjct: 76  HLFDQIPQPDIVLFNTMARGY---ARTDTPLRAFTLFTQILFSGLFPDDYTFPSLLKACA 132

Query: 323 PFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNA 382
               L     +H   +K G+  N  V   L  +Y+  NEM+ AR++FD+  E  + ++NA
Sbjct: 133 SCKALEEGRQLHCLAIKLGLSENVYVCPTLINMYTACNEMDCARRVFDKIWEPCVVTYNA 192

Query: 383 MIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRN 442
           MI GY +     EA+SLF+E+QA  + P  VT+ S+LS+CA LGA+ LGKW+HE VK   
Sbjct: 193 MITGYARGSRPNEALSLFRELQARNLKPTDVTMLSVLSSCALLGALDLGKWMHEYVKKNG 252

Query: 443 FESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFS 502
           F   + V TALIDMYAKCG++ +A  +F+ M+ +    W+ MI  Y +HGHGL+A+ LF 
Sbjct: 253 FNRFVKVDTALIDMYAKCGSLDDAVCVFENMAVRDTQAWSAMIMAYAIHGHGLKAVSLFK 312

Query: 503 EMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRA 562
           EM  +G  P  +TFL +LYACSH GLV EG E F  M   +G  P  +HY CMVD+LGRA
Sbjct: 313 EMRKAGTEPDEITFLGLLYACSHTGLVEEGFEYFYGMRDKYGVIPGIKHYGCMVDLLGRA 372

Query: 563 GQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLS 622
           G+LE+A EFI GL + P P +W  LL AC  H +  L +   E++FELD  + G +++LS
Sbjct: 373 GRLEEAYEFIVGLPIRPTPILWRTLLSACGSHGNVELGKRVIEQIFELDDSHGGDYIILS 432

Query: 623 NIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLE 682
           N+ +    +     VR+++ +R + K PGC+ +EV    H F SGD +H  ST ++  L+
Sbjct: 433 NLCARAGRWEDVNYVRKLMNERGVVKIPGCSSVEVNNVVHEFFSGDGVHSVSTKLHQALD 492

Query: 683 KLNGKMREAGFQTETVTALH-DVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNL 741
           +L  +++  G+   T    H D+E+EEKE+ ++ HSEKLAI FGL+ T PGT IR++KNL
Sbjct: 493 ELVKELKLVGYVPNTSLVFHADMEDEEKEVTLRYHSEKLAITFGLLNTPPGTTIRVVKNL 552

Query: 742 RVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           RVC DCH+A K IS +  R I++RD  RFHHFK G CSC DYW
Sbjct: 553 RVCGDCHSAAKLISLIFDRQIILRDVQRFHHFKDGKCSCEDYW 595



 Score =  155 bits (393), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 100/369 (27%), Positives = 186/369 (50%), Gaps = 6/369 (1%)

Query: 130 LHGHAIVSGYGSDLFVGAALVD---LYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMK 186
           L   AI +   SDL V    ++   L    + ++ A  +FD++P+ D VL+N+M  G  +
Sbjct: 39  LQAFAIKTHLHSDLSVLTKFINFCSLNPTTTSMQHAHHLFDQIPQPDIVLFNTMARGYAR 98

Query: 187 NCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVY 246
                 +  +F  ++ +G  + D  +  ++L A A  + L  G ++ CL +KLG  ++VY
Sbjct: 99  TDTPLRAFTLFTQILFSG-LFPDDYTFPSLLKACASCKALEEGRQLHCLAIKLGLSENVY 157

Query: 247 VLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASA 306
           V   L++ Y+ C E++ A  +F  I  P +++ NAMI+GY    +   +L LFR+L A  
Sbjct: 158 VCPTLINMYTACNEMDCARRVFDKIWEPCVVTYNAMITGYARGSRPNEALSLFRELQARN 217

Query: 307 ERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAAR 366
            +    T++ ++      G L L   +H +  K+G      V TAL  +Y++   ++ A 
Sbjct: 218 LKPTDVTMLSVLSSCALLGALDLGKWMHEYVKKNGFNRFVKVDTALIDMYAKCGSLDDAV 277

Query: 367 KLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLG 426
            +F+  + +   +W+AMI  Y  +G   +A+SLF+EM+ +   P+ +T   +L AC+  G
Sbjct: 278 CVFENMAVRDTQAWSAMIMAYAIHGHGLKAVSLFKEMRKAGTEPDEITFLGLLYACSHTG 337

Query: 427 AISLG-KWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARE-LFDLMSHKSEVTWNTM 484
            +  G ++ + +         I     ++D+  + G + EA E +  L    + + W T+
Sbjct: 338 LVEEGFEYFYGMRDKYGVIPGIKHYGCMVDLLGRAGRLEEAYEFIVGLPIRPTPILWRTL 397

Query: 485 ISGYGLHGH 493
           +S  G HG+
Sbjct: 398 LSACGSHGN 406



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 112/429 (26%), Positives = 196/429 (45%), Gaps = 38/429 (8%)

Query: 13  LSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATC---YARALFFSIPK 69
           LSLL    +  +L Q  A  I     +DLS +TK  +  S    T    +A  LF  IP+
Sbjct: 24  LSLLPKCTSLRELKQLQAFAIKTHLHSDLSVLTKFINFCSLNPTTTSMQHAHHLFDQIPQ 83

Query: 70  PDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVL 129
           PD+ LFN + RG++  + P  +   +T +   + L PD++T+  +L A ++C     G  
Sbjct: 84  PDIVLFNTMARGYARTDTPLRAFTLFTQIL-FSGLFPDDYTFPSLLKACASCKALEEGRQ 142

Query: 130 LHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCC 189
           LH  AI  G   +++V   L+++Y   + +  AR+VFDK+ E   V +N+MI+G  +   
Sbjct: 143 LHCLAIKLGLSENVYVCPTLINMYTACNEMDCARRVFDKIWEPCVVTYNAMITGYARGSR 202

Query: 190 FQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLT 249
             +++ +F ++        D T + +VL + A +  L LG  +     K GF+  V V T
Sbjct: 203 PNEALSLFRELQARNLKPTDVTML-SVLSSCALLGALDLGKWMHEYVKKNGFNRFVKVDT 261

Query: 250 GLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERV 309
            L+  Y+KCG ++ A  +F ++   D  + +AMI  Y  +G    ++ LF+++  +    
Sbjct: 262 ALIDMYAKCGSLDDAVCVFENMAVRDTQAWSAMIMAYAIHGHGLKAVSLFKEMRKAGTEP 321

Query: 310 NSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLF 369
           +  T +GL           L  C H+  ++ G          +   Y  +          
Sbjct: 322 DEITFLGL-----------LYACSHTGLVEEGF----EYFYGMRDKYGVI---------- 356

Query: 370 DESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAIS 429
                  +  +  M+    + G  EEA   ++ +    + P P+   ++LSAC   G + 
Sbjct: 357 -----PGIKHYGCMVDLLGRAGRLEEA---YEFIVGLPIRPTPILWRTLLSACGSHGNVE 408

Query: 430 LGKWVHELV 438
           LGK V E +
Sbjct: 409 LGKRVIEQI 417


>gi|297740109|emb|CBI30291.3| unnamed protein product [Vitis vinifera]
          Length = 616

 Score =  470 bits (1209), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 237/617 (38%), Positives = 373/617 (60%), Gaps = 2/617 (0%)

Query: 169 MPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRL 228
           MP+++ V W +MISGL +N  F ++I  F  M R  G      + ++ + A A +  + +
Sbjct: 1   MPQRNLVSWTAMISGLSQNSKFSEAIRTFCGM-RICGEVPTQFAFSSAIRACASLGSIEM 59

Query: 229 GMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTC 288
           G ++ CL LK G    ++V + L   YSKCG +  A  +F ++   D +S  AMI GY+ 
Sbjct: 60  GKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSK 119

Query: 289 NGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSV 348
            G+ E +L  F++++     ++   +   +              +HS  +K G  S+  V
Sbjct: 120 IGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFV 179

Query: 349 LTALSTVYSRLNEMEAARKLFDESSE-KSLASWNAMIAGYTQNGLTEEAISLFQEMQASK 407
             AL+ +YS+  +ME+A  +F   SE +++ S+  +I GY +    E+ +S+F E++   
Sbjct: 180 GNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQG 239

Query: 408 VAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEAR 467
           + PN  T SS++ ACA   A+  G  +H  V   NF+ + +VS+ L+DMY KCG + +A 
Sbjct: 240 IEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQAI 299

Query: 468 ELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAG 527
           + FD +   +E+ WN+++S +G HG G +A+++F  M+  G++P+ +TF+S+L  CSHAG
Sbjct: 300 QAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTGCSHAG 359

Query: 528 LVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGAL 587
           LV EG + F SM   +G  P  EHY+C++D+LGRAG+L++A EFI  +  EP    W + 
Sbjct: 360 LVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSF 419

Query: 588 LGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLA 647
           LGAC IH D  + ++A+EKL +L+P+N G  VLLSNIY+ ER +    +VR  ++   + 
Sbjct: 420 LGACRIHGDKEMGKLAAEKLVKLEPKNSGALVLLSNIYANERQWEDVRSVRMRMRDGNVK 479

Query: 648 KAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEE 707
           K PG + ++VG   HVF + D  HP+ +AIY  L+ L  +++ AG+   T +   D+++ 
Sbjct: 480 KLPGYSWVDVGYKTHVFGAEDWSHPRKSAIYEKLDTLLDQIKAAGYVPRTDSVPLDMDDS 539

Query: 708 EKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDA 767
            KE ++  HSE++A+AF LI+   G  I + KNLRVC+DCH+A KFISKVTGR I+VRD 
Sbjct: 540 MKEKLLHRHSERIAVAFALISMPIGKPIIVKKNLRVCVDCHSAIKFISKVTGRKIIVRDN 599

Query: 768 NRFHHFKGGVCSCGDYW 784
           +RFHHF  G CSCGDYW
Sbjct: 600 SRFHHFTDGSCSCGDYW 616



 Score =  165 bits (418), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 114/429 (26%), Positives = 203/429 (47%), Gaps = 5/429 (1%)

Query: 67  IPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSI 126
           +P+ +L  +  +I G S N     +I  +  +R      P  F +S  + A ++     +
Sbjct: 1   MPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRI-CGEVPTQFAFSSAIRACASLGSIEM 59

Query: 127 GVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMK 186
           G  +H  A+  G GS+LFVG+ L D+Y K   +  A KVF++MP KD V W +MI G  K
Sbjct: 60  GKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSK 119

Query: 187 NCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVY 246
              F++++  F  M+    T +D   + + L A   ++  + G  +    +KLGF   ++
Sbjct: 120 IGEFEEALLAFKKMIDEEVT-IDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIF 178

Query: 247 VLTGLVSFYSKCGEVERAELLFR-DIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLAS 305
           V   L   YSK G++E A  +F  D    +++S   +I GY    + E  L +F +L   
Sbjct: 179 VGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQ 238

Query: 306 AERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAA 365
               N  T   LI        L     +H+  +K     +  V + L  +Y +   +E A
Sbjct: 239 GIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQA 298

Query: 366 RKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQL 425
            + FDE  + +  +WN++++ + Q+GL ++AI +F+ M    V PN +T  S+L+ C+  
Sbjct: 299 IQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTGCSHA 358

Query: 426 GAISLG-KWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEV-TWNT 483
           G +  G  + + + K+          + +ID+  + G + EA+E  + M  +     W +
Sbjct: 359 GLVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCS 418

Query: 484 MISGYGLHG 492
            +    +HG
Sbjct: 419 FLGACRIHG 427


>gi|347954546|gb|AEP33773.1| organelle transcript processing 82, partial [Lobularia maritima]
          Length = 695

 Score =  470 bits (1209), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 260/695 (37%), Positives = 399/695 (57%), Gaps = 43/695 (6%)

Query: 129 LLHGHAIVSGYGSDLFVGAALVD---LYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLM 185
           ++H   I +G  +  +  + L++   L   F  +  A  VF+ + E + ++WN+M  G  
Sbjct: 5   MIHAQMIKTGLHNTNYALSKLIEFCVLSPHFDGLPYAISVFETIQEPNLLIWNTMFRGHA 64

Query: 186 KNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHV 245
            +     +++++  M+ + G   +  +   +L + A+ +  R G +I    LKLG+   +
Sbjct: 65  LSSDPVSALYLYVCMI-SLGLLPNCYTFPFLLKSCAKSKAFREGQQIHGHVLKLGYDLDL 123

Query: 246 YVLTGLVSFYSKCGEVERAELLF-----RDIVR--------------------------P 274
           YV T L+S Y + G +E A  +F     RD+V                            
Sbjct: 124 YVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIASAQKMFDEIPIK 183

Query: 275 DLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIH 334
           D++S NAMISGY   G  + +L LF++++ +  R + ST+V ++        + L   +H
Sbjct: 184 DVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQVH 243

Query: 335 SFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTE 394
           S+    G  SN  ++ AL  +Y +  E+E A  LF+  S K + SWN +I GYT   L +
Sbjct: 244 SWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGGYTHMNLYK 303

Query: 395 EAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSR-----NFESNIYV 449
           EA+ LFQEM  S  +PN VT+ SIL ACA LGAI +G+W+H  +  R     N  S+   
Sbjct: 304 EALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVANASSH--- 360

Query: 450 STALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGI 509
            T+LIDMYAKCG+I  A+++FD + ++S  +WN MI G+ +HG    A  +FS M  + I
Sbjct: 361 RTSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEI 420

Query: 510 RPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKAL 569
            P  +TF+ +L ACSH+G++  G  IF+SM  D+   P  EHY CM+D+LG +G  ++A 
Sbjct: 421 EPDDITFVGLLSACSHSGMLDLGRHIFRSMKEDYKITPKLEHYGCMIDLLGHSGLFKEAE 480

Query: 570 EFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAER 629
           E I  + +EP   +W +LL AC +H +  L    ++ L +++P+N G +VLLSNIY+   
Sbjct: 481 EMINTMEMEPDGVIWCSLLKACKMHGNVELGESYAQNLIKIEPKNPGSYVLLSNIYATAG 540

Query: 630 DYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMR 689
            + + A +R ++  + + K PGC+ IE+    H F  GD+ HP++  IY MLE++   + 
Sbjct: 541 RWNEVAKIRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLE 600

Query: 690 EAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHT 749
           EAGF  +T   L ++EEE KE  ++ HSEKLAIAFGLI+T+PGT++ I+KNLRVC +CH 
Sbjct: 601 EAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHE 660

Query: 750 ATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           ATK ISK+  R I+ RD  RFHHF+ GVCSC DYW
Sbjct: 661 ATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 695



 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 155/566 (27%), Positives = 283/566 (50%), Gaps = 46/566 (8%)

Query: 23  SQLTQTHAQIIIHGFQNDLSTVTKLAHRL---SDFKATCYARALFFSIPKPDLFLFNVII 79
           S L   HAQ+I  G  N    ++KL         F    YA ++F +I +P+L ++N + 
Sbjct: 1   SSLRMIHAQMIKTGLHNTNYALSKLIEFCVLSPHFDGLPYAISVFETIQEPNLLIWNTMF 60

Query: 80  RGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGY 139
           RG + +  P S++  Y  +  +  L P+ +T+ F+L + +       G  +HGH +  GY
Sbjct: 61  RGHALSSDPVSALYLYVCM-ISLGLLPNCYTFPFLLKSCAKSKAFREGQQIHGHVLKLGY 119

Query: 140 GSDLFVGAALVDLYFKF-------------------------------SWVKSARKVFDK 168
             DL+V  +L+ +Y +                                 ++ SA+K+FD+
Sbjct: 120 DLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIASAQKMFDE 179

Query: 169 MPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRL 228
           +P KD V WN+MISG  +    ++++ +F +M++      D +++ +V+ A A+   + L
Sbjct: 180 IPIKDVVSWNAMISGYAETGNNKEALELFKEMMKT-NVRPDESTMVSVVSACAQSASIEL 238

Query: 229 GMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTC 288
           G ++       GF  ++ ++  L+  Y KCGEVE A  LF  +   D+IS N +I GYT 
Sbjct: 239 GRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGGYTH 298

Query: 289 NGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLK--SGIVSNS 346
               + +L LF+++L S E  N  T++ ++P     G + +   IH +  K   G+ + S
Sbjct: 299 MNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVANAS 358

Query: 347 SVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQAS 406
           S  T+L  +Y++  ++EAA+++FD    +SL+SWNAMI G+  +G    A  +F  M+ +
Sbjct: 359 SHRTSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKN 418

Query: 407 KVAPNPVTVSSILSACAQLGAISLGKWVHELVKSR-NFESNIYVSTALIDMYAKCGNIVE 465
           ++ P+ +T   +LSAC+  G + LG+ +   +K        +     +ID+    G   E
Sbjct: 419 EIEPDDITFVGLLSACSHSGMLDLGRHIFRSMKEDYKITPKLEHYGCMIDLLGHSGLFKE 478

Query: 466 ARELFDLMSHKSE-VTWNTMISGYGLHGHGLEALQLFSEML--HSGIRPSGVTFLSVLYA 522
           A E+ + M  + + V W +++    +HG+ +E  + +++ L       P     LS +YA
Sbjct: 479 AEEMINTMEMEPDGVIWCSLLKACKMHGN-VELGESYAQNLIKIEPKNPGSYVLLSNIYA 537

Query: 523 CSHAGLVREGDEIFQSMIHDHGFKPL 548
              AG   E  +I +++++D G K +
Sbjct: 538 T--AGRWNEVAKI-RALLNDKGMKKV 560


>gi|357113684|ref|XP_003558631.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Brachypodium distachyon]
          Length = 802

 Score =  469 bits (1208), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 268/712 (37%), Positives = 391/712 (54%), Gaps = 73/712 (10%)

Query: 142 DLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMV 201
           ++F   +L+ LY K   +  AR VF +MPE+D V W  M+ GL +   F ++I +F DMV
Sbjct: 95  NVFTWNSLLSLYAKSGRLADARAVFAEMPERDPVSWTVMVVGLNRVGRFGEAIKMFLDMV 154

Query: 202 RNGGTWLDST--SVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCG 259
            +G   L  T  ++  VL + A  +   +G ++    +KLG    V V   +++ Y KCG
Sbjct: 155 TDG---LSPTQFTLTNVLSSCAATEARGVGRKVHSFVVKLGLSSCVPVANSVLNMYGKCG 211

Query: 260 EVERAELLFRDIVR-----------------------------PD--LISCNAMISGYTC 288
           + E A  +F  +                               PD  ++S NA+I+GY  
Sbjct: 212 DAETARAVFERMPERSVSSWNAMVSLDAHLGRMDLALSLFENMPDRTIVSWNAVIAGYNQ 271

Query: 289 NGKTESSLRLFRQLLA-SAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKS-----GI 342
           NG    +L  F ++L+ S    +  TI  ++      G + +   +H++ L+S     G 
Sbjct: 272 NGLNAKALWFFSRMLSYSTMAPDEFTITSVLSACANLGMVSIGKQVHAYILRSRMPYIGQ 331

Query: 343 VSNSSV----------------------------LTALSTVYSRLNEMEAARKLFDESSE 374
           V+N+ +                             TAL   Y +L +M+ AR++FD  S 
Sbjct: 332 VTNALISMYAKSGSVENARGVMQQAVMADLNVISFTALLEGYVKLGDMKHAREMFDVMSN 391

Query: 375 KSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWV 434
           + + +W AMI GY QNG  +EA+ LF+ M  S   PN  TV+++LS CA L  +  GK +
Sbjct: 392 RDVVAWTAMIVGYEQNGHNDEAMELFRLMIRSGPEPNSYTVAAVLSVCASLACLEYGKQI 451

Query: 435 H-ELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSE-VTWNTMISGYGLHG 492
           H + ++S   +S+  VS +++ MYA+ G++  AR +FD +  + E VTW +MI     HG
Sbjct: 452 HCKAIRSLQEQSS-SVSNSIVTMYARSGSLPWARRVFDRVHWRKETVTWTSMIVALAQHG 510

Query: 493 HGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHY 552
            G +A+ LF EML  G++P  +TF+ VL AC+H G V EG   FQ +   HG  P   HY
Sbjct: 511 LGEDAVGLFEEMLRVGVKPDRITFVGVLSACTHVGFVDEGKRYFQQLQDKHGIVPEMSHY 570

Query: 553 ACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDP 612
           ACMVD+L RAG   +A EFI+ + VEP    WG+LL AC +HK+ +LA +A+EKL  +DP
Sbjct: 571 ACMVDLLARAGLFSEAQEFIQQMPVEPDAIAWGSLLSACRVHKNADLAELAAEKLLSIDP 630

Query: 613 ENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHP 672
            N G +  LSN+YSA   +  AA + +  K + + K  G +   +G   HVF + D LHP
Sbjct: 631 GNSGAYSALSNVYSACGRWNDAAKIWKRRKDKSVKKETGFSWTHIGNRVHVFGADDVLHP 690

Query: 673 QSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPG 732
           Q   +Y    K+   +++AGF  +  + LHDV++E KE M+  HSEKLAIAFGL++T   
Sbjct: 691 QRDTVYRTAAKMWDDIKKAGFVPDLQSVLHDVDDELKEEMLSRHSEKLAIAFGLVSTPEK 750

Query: 733 TEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           T +RI+KNLRVC DCHTA KFISKV  R I++RDA RFHHFK G CSC DYW
Sbjct: 751 TTLRIMKNLRVCNDCHTAIKFISKVADREIILRDATRFHHFKDGFCSCKDYW 802



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 128/520 (24%), Positives = 226/520 (43%), Gaps = 74/520 (14%)

Query: 39  NDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHL 98
           N L ++   + RL+D      ARA+F  +P+ D   + V++ G +       +I  +  +
Sbjct: 100 NSLLSLYAKSGRLAD------ARAVFAEMPERDPVSWTVMVVGLNRVGRFGEAIKMFLDM 153

Query: 99  RKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSW 158
             +  L+P  FT + VLS+ +A   R +G  +H   +  G  S + V  +++++Y K   
Sbjct: 154 VTD-GLSPTQFTLTNVLSSCAATEARGVGRKVHSFVVKLGLSSCVPVANSVLNMYGKCGD 212

Query: 159 VKSARKVFDKMPEKDTVLWNSMIS-------------------------------GLMKN 187
            ++AR VF++MPE+    WN+M+S                               G  +N
Sbjct: 213 AETARAVFERMPERSVSSWNAMVSLDAHLGRMDLALSLFENMPDRTIVSWNAVIAGYNQN 272

Query: 188 CCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYV 247
                ++W F  M+       D  ++ +VL A A +  + +G ++    L+        V
Sbjct: 273 GLNAKALWFFSRMLSYSTMAPDEFTITSVLSACANLGMVSIGKQVHAYILRSRMPYIGQV 332

Query: 248 LTGLVSFYSKCGEVERAELLFRDIVRPDL------------------------------- 276
              L+S Y+K G VE A  + +  V  DL                               
Sbjct: 333 TNALISMYAKSGSVENARGVMQQAVMADLNVISFTALLEGYVKLGDMKHAREMFDVMSNR 392

Query: 277 --ISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIH 334
             ++  AMI GY  NG  + ++ LFR ++ S    NS T+  ++ V      L     IH
Sbjct: 393 DVVAWTAMIVGYEQNGHNDEAMELFRLMIRSGPEPNSYTVAAVLSVCASLACLEYGKQIH 452

Query: 335 SFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESS-EKSLASWNAMIAGYTQNGLT 393
              ++S    +SSV  ++ T+Y+R   +  AR++FD     K   +W +MI    Q+GL 
Sbjct: 453 CKAIRSLQEQSSSVSNSIVTMYARSGSLPWARRVFDRVHWRKETVTWTSMIVALAQHGLG 512

Query: 394 EEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGK-WVHELVKSRNFESNIYVSTA 452
           E+A+ LF+EM    V P+ +T   +LSAC  +G +  GK +  +L         +     
Sbjct: 513 EDAVGLFEEMLRVGVKPDRITFVGVLSACTHVGFVDEGKRYFQQLQDKHGIVPEMSHYAC 572

Query: 453 LIDMYAKCGNIVEARELFDLMSHKSE-VTWNTMISGYGLH 491
           ++D+ A+ G   EA+E    M  + + + W +++S   +H
Sbjct: 573 MVDLLARAGLFSEAQEFIQQMPVEPDAIAWGSLLSACRVH 612



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 108/457 (23%), Positives = 197/457 (43%), Gaps = 79/457 (17%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           A +LF ++P   +  +N +I G++ N +   ++ F++ +   + + PD FT + VLSA +
Sbjct: 247 ALSLFENMPDRTIVSWNAVIAGYNQNGLNAKALWFFSRMLSYSTMAPDEFTITSVLSACA 306

Query: 120 ACCDRSIGVLLHGH--------------AIVSGYG-----------------SDLFVGA- 147
                SIG  +H +              A++S Y                  +DL V + 
Sbjct: 307 NLGMVSIGKQVHAYILRSRMPYIGQVTNALISMYAKSGSVENARGVMQQAVMADLNVISF 366

Query: 148 -ALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGT 206
            AL++ Y K   +K AR++FD M  +D V W +MI G  +N    +++ +F  M+R+G  
Sbjct: 367 TALLEGYVKLGDMKHAREMFDVMSNRDVVAWTAMIVGYEQNGHNDEAMELFRLMIRSGPE 426

Query: 207 WLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAEL 266
             +S +VAAVL   A +  L  G +I C  ++        V   +V+ Y++ G +  A  
Sbjct: 427 -PNSYTVAAVLSVCASLACLEYGKQIHCKAIRSLQEQSSSVSNSIVTMYARSGSLPWARR 485

Query: 267 LFRDI-VRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFG 325
           +F  +  R + ++  +MI     +G  E ++ LF ++L    + +  T VG+        
Sbjct: 486 VFDRVHWRKETVTWTSMIVALAQHGLGEDAVGLFEEMLRVGVKPDRITFVGV-------- 537

Query: 326 HLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEK-----SLASW 380
              L+ C H   +  G                        ++ F +  +K      ++ +
Sbjct: 538 ---LSACTHVGFVDEG------------------------KRYFQQLQDKHGIVPEMSHY 570

Query: 381 NAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKS 440
             M+    + GL  EA    Q+M    V P+ +   S+LSAC       L +   E + S
Sbjct: 571 ACMVDLLARAGLFSEAQEFIQQM---PVEPDAIAWGSLLSACRVHKNADLAELAAEKLLS 627

Query: 441 RNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKS 477
            +   N    +AL ++Y+ CG   +A +++     KS
Sbjct: 628 ID-PGNSGAYSALSNVYSACGRWNDAAKIWKRRKDKS 663



 Score = 63.2 bits (152), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 44/171 (25%), Positives = 80/171 (46%), Gaps = 8/171 (4%)

Query: 444 ESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSE 503
           + N++   +L+ +YAK G + +AR +F  M  +  V+W  M+ G    G   EA+++F +
Sbjct: 93  QRNVFTWNSLLSLYAKSGRLADARAVFAEMPERDPVSWTVMVVGLNRVGRFGEAIKMFLD 152

Query: 504 MLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAG 563
           M+  G+ P+  T  +VL +C+ A   R       S +   G          ++++ G+ G
Sbjct: 153 MVTDGLSPTQFTLTNVLSSCA-ATEARGVGRKVHSFVVKLGLSSCVPVANSVLNMYGKCG 211

Query: 564 QLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVA-SEKLFELDPE 613
             E A    + +  E   + W A     M+  D +L R+  +  LFE  P+
Sbjct: 212 DAETARAVFERMP-ERSVSSWNA-----MVSLDAHLGRMDLALSLFENMPD 256


>gi|125545880|gb|EAY92019.1| hypothetical protein OsI_13712 [Oryza sativa Indica Group]
          Length = 804

 Score =  469 bits (1208), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 258/709 (36%), Positives = 383/709 (54%), Gaps = 67/709 (9%)

Query: 142 DLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMV 201
           ++F   +L+ ++ K   +  AR VF +MPE+D V W  M+ GL +   F ++I    DM 
Sbjct: 97  NVFTWNSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMT 156

Query: 202 RNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEV 261
            +G T    T +  VL + A  Q   +G ++    +KLG    V V   +++ Y KCG+ 
Sbjct: 157 ADGFTPTQFT-LTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDA 215

Query: 262 ERA-------------------------------ELLFRDIVRPDLISCNAMISGYTCNG 290
           E A                               E LF  +    ++S NAMI+GY  NG
Sbjct: 216 ETASTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPGRSIVSWNAMIAGYNQNG 275

Query: 291 KTESSLRLFRQLL-ASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVL 349
               +L+LF ++L  S+   +  TI  ++      G++ +   +H++ L++ +  NS V 
Sbjct: 276 LDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVT 335

Query: 350 TALSTVYSRLNEMEAARKLFDESSE---------------------------------KS 376
            AL + Y++   +E AR++ D+S E                                 + 
Sbjct: 336 NALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRD 395

Query: 377 LASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHE 436
           + +W AMI GY QNG  +EAI LF+ M      PN  T++++LS CA L  +  GK +H 
Sbjct: 396 VVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHC 455

Query: 437 LVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSE-VTWNTMISGYGLHGHGL 495
                  E +  VS A+I MYA+ G+   AR +FD +  + E +TW +MI     HG G 
Sbjct: 456 RAIRSLLERSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGE 515

Query: 496 EALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACM 555
           EA+ LF EML +G+ P  +T++ VL ACSHAG V EG   +  + ++H   P   HYACM
Sbjct: 516 EAVGLFEEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACM 575

Query: 556 VDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENV 615
           VD+L RAG   +A EFI+ + VEP    WG+LL AC +HK+  LA +A+EKL  +DP N 
Sbjct: 576 VDLLARAGLFSEAQEFIRRMPVEPDAIAWGSLLSACRVHKNAELAELAAEKLLSIDPNNS 635

Query: 616 GYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQST 675
           G +  ++N+YSA   +  AA + +  K++ + K  G +   +    HVF + D +HPQ  
Sbjct: 636 GAYSAIANVYSACGRWSDAARIWKARKEKAVRKETGFSWTHIRSKIHVFGADDVVHPQRD 695

Query: 676 AIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEI 735
           A+YAM  ++  +++ AGF  +  + LHDV++E KE ++  HSEKLAIAFGLI+T   T +
Sbjct: 696 AVYAMAARMWEEIKGAGFVPDLQSVLHDVDDELKEELLSRHSEKLAIAFGLISTPEKTTL 755

Query: 736 RIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           R++KNLRVC DCH A K ISKVT R I+VRDA RFHHF+ G+CSC DYW
Sbjct: 756 RVMKNLRVCNDCHAAIKAISKVTDREIIVRDATRFHHFRDGLCSCKDYW 804



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 131/541 (24%), Positives = 239/541 (44%), Gaps = 76/541 (14%)

Query: 39  NDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHL 98
           N L ++   + RL+D      AR +F  +P+ D   + V++ G +       +I     +
Sbjct: 102 NSLLSMFAKSGRLAD------ARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDM 155

Query: 99  RKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSW 158
             +   TP  FT + VLS+ +     ++G  +H   +  G GS + V  +++++Y K   
Sbjct: 156 TAD-GFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGD 214

Query: 159 VKSARKVFDKMPEKDT-------------------------------VLWNSMISGLMKN 187
            ++A  VF++MP +                                 V WN+MI+G  +N
Sbjct: 215 AETASTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPGRSIVSWNAMIAGYNQN 274

Query: 188 CCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYV 247
                ++ +F  M+       D  ++ +VL A A +  +R+G ++    L+     +  V
Sbjct: 275 GLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQV 334

Query: 248 LTGLVSFYSKCGEVERAELLFRDIVRPDL------------------------------- 276
              L+S Y+K G VE A  +    +  DL                               
Sbjct: 335 TNALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNR 394

Query: 277 --ISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIH 334
             ++  AMI GY  NG+ + ++ LFR ++      NS T+  ++ V      L     IH
Sbjct: 395 DVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIH 454

Query: 335 SFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESS-EKSLASWNAMIAGYTQNGLT 393
              ++S +  +SSV  A+ T+Y+R      AR++FD+    K   +W +MI    Q+G  
Sbjct: 455 CRAIRSLLERSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQG 514

Query: 394 EEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRN-FESNIYVSTA 452
           EEA+ LF+EM  + V P+ +T   +LSAC+  G ++ GK  ++ +K+ +     +     
Sbjct: 515 EEAVGLFEEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYAC 574

Query: 453 LIDMYAKCGNIVEARELFDLMSHKSE-VTWNTMISGYGLHGHGLEALQLFSEMLHSGIRP 511
           ++D+ A+ G   EA+E    M  + + + W +++S   +H +  E  +L +E L S I P
Sbjct: 575 MVDLLARAGLFSEAQEFIRRMPVEPDAIAWGSLLSACRVHKNA-ELAELAAEKLLS-IDP 632

Query: 512 S 512
           +
Sbjct: 633 N 633



 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 104/453 (22%), Positives = 196/453 (43%), Gaps = 71/453 (15%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           A +LF S+P   +  +N +I G++ N +   ++  ++ +   +++ PD FT + VLSA +
Sbjct: 249 AESLFESMPGRSIVSWNAMIAGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACA 308

Query: 120 ACCDRSIGVLLHGH--------------AIVSGYG-----------------SDLFVGA- 147
              +  IG  +H +              A++S Y                  +DL V + 
Sbjct: 309 NLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQSMETDLNVISF 368

Query: 148 -ALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGT 206
            AL++ Y K   ++SAR++F  M  +D V W +MI G  +N    ++I +F  M+   G 
Sbjct: 369 TALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMI-TCGP 427

Query: 207 WLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAEL 266
             +S ++AAVL   A +  L  G +I C  ++        V   +++ Y++ G    A  
Sbjct: 428 EPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLERSSSVSNAIITMYARSGSFPWARR 487

Query: 267 LFRDIV-RPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFG 325
           +F  +  R + I+  +MI     +G+ E ++ LF ++L +    +  T VG+        
Sbjct: 488 MFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDRITYVGV-------- 539

Query: 326 HLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRL-NEMEAARKLFDESSEKSLASWNAMI 384
              L+ C H+  +  G              Y ++ NE + A           ++ +  M+
Sbjct: 540 ---LSACSHAGFVNEG-----------KRYYDQIKNEHQIA---------PEMSHYACMV 576

Query: 385 AGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFE 444
               + GL  EA    + M    V P+ +   S+LSAC       L +   E + S +  
Sbjct: 577 DLLARAGLFSEAQEFIRRM---PVEPDAIAWGSLLSACRVHKNAELAELAAEKLLSID-P 632

Query: 445 SNIYVSTALIDMYAKCGNIVEARELFDLMSHKS 477
           +N    +A+ ++Y+ CG   +A  ++     K+
Sbjct: 633 NNSGAYSAIANVYSACGRWSDAARIWKARKEKA 665



 Score = 39.3 bits (90), Expect = 8.8,   Method: Compositional matrix adjust.
 Identities = 31/138 (22%), Positives = 59/138 (42%), Gaps = 11/138 (7%)

Query: 416 SSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAK----CGNIVEARELFD 471
           + +L  C        G+ +H         ++ Y+   L+  Y +     G + +AR LFD
Sbjct: 30  ARLLQLCQTAANPGAGRAIHARAVKAGLLASAYLCNNLLSYYGETAGGAGGLRDARRLFD 89

Query: 472 --LMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLV 529
              ++ ++  TWN+++S +   G   +A  +F+EM         V++  ++   + AG  
Sbjct: 90  EIPLARRNVFTWNSLLSMFAKSGRLADARGVFAEMPER----DAVSWTVMVVGLNRAGRF 145

Query: 530 REGDEIFQSMIHDHGFKP 547
            E  +    M  D GF P
Sbjct: 146 GEAIKTLLDMTAD-GFTP 162


>gi|347954526|gb|AEP33763.1| organelle transcript processing 82, partial [Isatis tinctoria]
          Length = 671

 Score =  469 bits (1208), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 260/662 (39%), Positives = 379/662 (57%), Gaps = 34/662 (5%)

Query: 156 FSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAA 215
           F  +  A  VF+ + E + ++WN+MI G   +     S+ ++  MV + G   +S +   
Sbjct: 11  FDGLPYATSVFETIQEPNQLIWNTMIRGHALSSDPVSSLTLYVCMV-SLGLLPNSYTFPF 69

Query: 216 VLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFY-------------------- 255
           +L + A+ +    G +I    LKLGF   +YV T L+S Y                    
Sbjct: 70  LLKSCAKSKTFTEGQQIHGQVLKLGFDLDLYVHTSLISMYVQNWRLEDAYKVFDRSSHRD 129

Query: 256 -----------SKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLA 304
                      +  G++  A+ LF +I   D++S NAMISGY   G  + +L LF +++ 
Sbjct: 130 VVSYTALITGYASRGDIRSAQKLFDEIPVKDVVSWNAMISGYAETGCYKEALELFEEMMK 189

Query: 305 SAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEA 364
              R + ST V ++      G + L   +HS+    G  SN  ++ AL  +YS+  E+E 
Sbjct: 190 MNVRPDESTYVTVLSACAHSGSIELGRQVHSWVDDHGFDSNLKIVNALIDLYSKCGEVET 249

Query: 365 ARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQ 424
           A  LF   S K + SWN +I GYT   L +EA+ LFQEM  S   PN VT+ S+L ACA 
Sbjct: 250 ACGLFQGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSVLPACAH 309

Query: 425 LGAISLGKWVHELVKSR--NFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWN 482
           LGAI +G+W+H  +  R     +   + T+LIDMYAKCG+I  A ++F+ M HKS  +WN
Sbjct: 310 LGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWN 369

Query: 483 TMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHD 542
            MI G+ +HG    +  LFS M   GI P  +TF+ +L ACSH+G++  G  IF+SM  D
Sbjct: 370 AMIFGFAMHGRADASFDLFSRMRKIGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTQD 429

Query: 543 HGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARV 602
           +   P  EHY CM+D+LG +G  ++A E I  + +EP   +W +LL AC +H +  LA  
Sbjct: 430 YKMTPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMHGNVELAES 489

Query: 603 ASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPH 662
            ++ L +++PEN   ++LLSNIY++   +   A +R ++  + + K PGC+ IEV     
Sbjct: 490 FAQNLIKIEPENPSSYILLSNIYASAGRWEDVARIRALLNGKCMKKVPGCSSIEVDSVVF 549

Query: 663 VFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAI 722
            F  GD+ HPQ+  IY MLE++   + EAGF  +T   L ++EEE KE  ++ HSEKLAI
Sbjct: 550 EFVVGDKFHPQNREIYGMLEEMEVLLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAI 609

Query: 723 AFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGD 782
           AFGLI+T+PGT++ I+KNLRVC +CH ATK +SK+  R IV RD  RFHHF+ GVCSC D
Sbjct: 610 AFGLISTKPGTKLTIVKNLRVCRNCHEATKLLSKIYKREIVARDRTRFHHFRDGVCSCND 669

Query: 783 YW 784
           YW
Sbjct: 670 YW 671



 Score =  224 bits (572), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 142/507 (28%), Positives = 260/507 (51%), Gaps = 42/507 (8%)

Query: 54  FKATCYARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSF 113
           F    YA ++F +I +P+  ++N +IRG + +  P SS+  Y  +  +  L P+++T+ F
Sbjct: 11  FDGLPYATSVFETIQEPNQLIWNTMIRGHALSSDPVSSLTLYVCM-VSLGLLPNSYTFPF 69

Query: 114 VLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSW--------------- 158
           +L + +     + G  +HG  +  G+  DL+V  +L+ +Y + +W               
Sbjct: 70  LLKSCAKSKTFTEGQQIHGQVLKLGFDLDLYVHTSLISMYVQ-NWRLEDAYKVFDRSSHR 128

Query: 159 -----------------VKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMV 201
                            ++SA+K+FD++P KD V WN+MISG  +  C+++++ +F +M+
Sbjct: 129 DVVSYTALITGYASRGDIRSAQKLFDEIPVKDVVSWNAMISGYAETGCYKEALELFEEMM 188

Query: 202 RNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEV 261
           +      D ++   VL A A    + LG ++       GF  ++ ++  L+  YSKCGEV
Sbjct: 189 KMN-VRPDESTYVTVLSACAHSGSIELGRQVHSWVDDHGFDSNLKIVNALIDLYSKCGEV 247

Query: 262 ERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVF 321
           E A  LF+ +   D+IS N +I GYT     + +L LF+++L S E  N  T++ ++P  
Sbjct: 248 ETACGLFQGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSVLPAC 307

Query: 322 YPFGHLHLTNCIHSFCLK--SGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLAS 379
              G + +   IH +  K   G+ + SS+ T+L  +Y++  ++EAA ++F+    KSL+S
Sbjct: 308 AHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSS 367

Query: 380 WNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWV-HELV 438
           WNAMI G+  +G  + +  LF  M+   + P+ +T   +LSAC+  G + LG+ +   + 
Sbjct: 368 WNAMIFGFAMHGRADASFDLFSRMRKIGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMT 427

Query: 439 KSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSE-VTWNTMISGYGLHGHGLEA 497
           +       +     +ID+    G   EA E+ + M  + + V W +++    +HG+ +E 
Sbjct: 428 QDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMHGN-VEL 486

Query: 498 LQLFSEML--HSGIRPSGVTFLSVLYA 522
            + F++ L       PS    LS +YA
Sbjct: 487 AESFAQNLIKIEPENPSSYILLSNIYA 513



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 126/492 (25%), Positives = 216/492 (43%), Gaps = 71/492 (14%)

Query: 19  AKTQSQLTQTHAQIIIHGFQNDLSTVTKLAH------RLSD----FKATCY--------- 59
           +KT ++  Q H Q++  GF  DL   T L        RL D    F  + +         
Sbjct: 77  SKTFTEGQQIHGQVLKLGFDLDLYVHTSLISMYVQNWRLEDAYKVFDRSSHRDVVSYTAL 136

Query: 60  ------------ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPD 107
                       A+ LF  IP  D+  +N +I G++     K ++  +  + K   + PD
Sbjct: 137 ITGYASRGDIRSAQKLFDEIPVKDVVSWNAMISGYAETGCYKEALELFEEMMK-MNVRPD 195

Query: 108 NFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFD 167
             TY  VLSA +      +G  +H      G+ S+L +  AL+DLY K   V++A  +F 
Sbjct: 196 ESTYVTVLSACAHSGSIELGRQVHSWVDDHGFDSNLKIVNALIDLYSKCGEVETACGLFQ 255

Query: 168 KMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELR 227
            +  KD + WN++I G      +++++ +F +M+R+G T  D T + +VLPA A +  + 
Sbjct: 256 GLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVT-MLSVLPACAHLGAID 314

Query: 228 LGMEIQCLGLKL--GFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISG 285
           +G  I     K   G  +   + T L+  Y+KCG++E A  +F  ++   L S NAMI G
Sbjct: 315 IGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFG 374

Query: 286 YTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSN 345
           +  +G+ ++S  LF ++       +  T VGL           L+ C HS  L  G    
Sbjct: 375 FAMHGRADASFDLFSRMRKIGIEPDDITFVGL-----------LSACSHSGMLDLG---- 419

Query: 346 SSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQA 405
             +  +++  Y    ++E                +  MI     +GL +EA  +   M+ 
Sbjct: 420 RHIFRSMTQDYKMTPKLE---------------HYGCMIDLLGHSGLFKEAEEMINTME- 463

Query: 406 SKVAPNPVTVSSILSACAQLGAISLGK-WVHELVKSRNFESNIYVSTALIDMYAKCGNIV 464
             + P+ V   S+L AC   G + L + +   L+K      + Y+   L ++YA  G   
Sbjct: 464 --MEPDGVIWCSLLKACKMHGNVELAESFAQNLIKIEPENPSSYI--LLSNIYASAGRWE 519

Query: 465 EARELFDLMSHK 476
           +   +  L++ K
Sbjct: 520 DVARIRALLNGK 531


>gi|15223099|ref|NP_172286.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174869|sp|Q9LN01.1|PPR21_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g08070
 gi|8778839|gb|AAF79838.1|AC026875_18 T6D22.15 [Arabidopsis thaliana]
 gi|332190118|gb|AEE28239.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 741

 Score =  469 bits (1208), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 260/692 (37%), Positives = 392/692 (56%), Gaps = 37/692 (5%)

Query: 129 LLHGHAIVSGYGSDLFVGAALVD---LYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLM 185
           ++H   I  G  +  +  + L++   L   F  +  A  VF  + E + ++WN+M  G  
Sbjct: 51  IIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGHA 110

Query: 186 KNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHV 245
            +     ++ ++  M+ + G   +S +   VL + A+ +  + G +I    LKLG    +
Sbjct: 111 LSSDPVSALKLYVCMI-SLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDL 169

Query: 246 YVLTGLVSFYSKCGE-------------------------------VERAELLFRDIVRP 274
           YV T L+S Y + G                                +E A+ LF +I   
Sbjct: 170 YVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVK 229

Query: 275 DLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIH 334
           D++S NAMISGY   G  + +L LF+ ++ +  R + ST+V ++      G + L   +H
Sbjct: 230 DVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVH 289

Query: 335 SFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTE 394
            +    G  SN  ++ AL  +YS+  E+E A  LF+    K + SWN +I GYT   L +
Sbjct: 290 LWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYK 349

Query: 395 EAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSR--NFESNIYVSTA 452
           EA+ LFQEM  S   PN VT+ SIL ACA LGAI +G+W+H  +  R     +   + T+
Sbjct: 350 EALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTS 409

Query: 453 LIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPS 512
           LIDMYAKCG+I  A ++F+ + HKS  +WN MI G+ +HG    +  LFS M   GI+P 
Sbjct: 410 LIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPD 469

Query: 513 GVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFI 572
            +TF+ +L ACSH+G++  G  IF++M  D+   P  EHY CM+D+LG +G  ++A E I
Sbjct: 470 DITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMI 529

Query: 573 KGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYL 632
             + +EP   +W +LL AC +H +  L    +E L +++PEN G +VLLSNIY++   + 
Sbjct: 530 NMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWN 589

Query: 633 QAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAG 692
           + A  R ++  + + K PGC+ IE+    H F  GD+ HP++  IY MLE++   + +AG
Sbjct: 590 EVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAG 649

Query: 693 FQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATK 752
           F  +T   L ++EEE KE  ++ HSEKLAIAFGLI+T+PGT++ I+KNLRVC +CH ATK
Sbjct: 650 FVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATK 709

Query: 753 FISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
            ISK+  R I+ RD  RFHHF+ GVCSC DYW
Sbjct: 710 LISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741



 Score =  219 bits (558), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 168/609 (27%), Positives = 287/609 (47%), Gaps = 78/609 (12%)

Query: 13  LSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRL---SDFKATCYARALFFSIPK 69
           LSLL   KT   L   HAQ+I  G  N    ++KL         F+   YA ++F +I +
Sbjct: 37  LSLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQE 96

Query: 70  PDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVL 129
           P+L ++N + RG + +  P S++  Y  +  +  L P+++T+ FVL + +       G  
Sbjct: 97  PNLLIWNTMFRGHALSSDPVSALKLYVCM-ISLGLLPNSYTFPFVLKSCAKSKAFKEGQQ 155

Query: 130 LHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDK--------------------- 168
           +HGH +  G   DL+V  +L+ +Y +   ++ A KVFDK                     
Sbjct: 156 IHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGY 215

Query: 169 ----------MPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLP 218
                     +P KD V WN+MISG  +   +++++ +F DM++      D +++  V+ 
Sbjct: 216 IENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKT-NVRPDESTMVTVVS 274

Query: 219 AVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLIS 278
           A A+   + LG ++       GF  ++ ++  L+  YSKCGE+E A  LF  +   D+IS
Sbjct: 275 ACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVIS 334

Query: 279 CNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCL 338
            N +I GYT     + +L LF+++L S E  N  T++ ++P     G + +   IH +  
Sbjct: 335 WNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYID 394

Query: 339 K--SGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEA 396
           K   G+ + SS+ T+L  +Y++  ++EAA ++F+    KSL+SWNAMI G+  +G  + +
Sbjct: 395 KRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADAS 454

Query: 397 ISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDM 456
             LF  M+   + P+ +T   +LSAC+  G + LG+ +   +      +  Y  T  ++ 
Sbjct: 455 FDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTM------TQDYKMTPKLEH 508

Query: 457 YAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTF 516
           Y  C        + DL+ H             GL     E + +          P GV +
Sbjct: 509 YG-C--------MIDLLGHS------------GLFKEAEEMINMMEME------PDGVIW 541

Query: 517 LSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLE-----KALEF 571
            S+L AC   G V  G+   +++I      P +  Y  + +I   AG+       +AL  
Sbjct: 542 CSLLKACKMHGNVELGESFAENLIKIEPENPGS--YVLLSNIYASAGRWNEVAKTRALLN 599

Query: 572 IKGLAVEPG 580
            KG+   PG
Sbjct: 600 DKGMKKVPG 608


>gi|449443608|ref|XP_004139569.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Cucumis sativus]
          Length = 878

 Score =  469 bits (1207), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 273/770 (35%), Positives = 419/770 (54%), Gaps = 28/770 (3%)

Query: 27  QTHAQIIIHGFQNDLSTVTKLAH---RLSDFKATCYARALFFSIPKPDLFLFNVIIRGFS 83
           Q H Q +  GF  D+S  T L     +  DF+     R +F  +   ++  +  ++ G++
Sbjct: 125 QVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFED---GRGIFDEMGIKNVVSWTSLLSGYA 181

Query: 84  NNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSI---GVLLHGHAIVSGYG 140
            N +    I     ++    + P+ FT++ VL A +   D SI   GV +H   + +G+ 
Sbjct: 182 RNGLNDEVIHLINQMQME-GVNPNGFTFATVLGALA---DESIIEGGVQVHAMIVKNGFE 237

Query: 141 SDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDM 200
              FV  AL+ +Y K   V  A  VFD M  +D+V WN MI G      + +   +F  M
Sbjct: 238 FTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFHRM 297

Query: 201 VRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGE 260
            R  G  L  T     L   ++ +EL    ++ C  +K G+     + T L+  YSKC  
Sbjct: 298 -RLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSKCSS 356

Query: 261 VERAELLFR--DIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNS---STIV 315
           V+ A  LF   D    ++++  AMI G+  N   E ++ LF Q+     R N    ST++
Sbjct: 357 VDEAFKLFSMADAAH-NVVTWTAMIGGFVQNNNNEKAVDLFCQMSREGVRPNHFTYSTVL 415

Query: 316 GLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEK 375
              P         L + +H+  +K+      SV TAL   Y +   +  + ++F     K
Sbjct: 416 AGKPS-------SLLSQLHAQIIKAYYEKVPSVATALLDAYVKTGNVVESARVFYSIPAK 468

Query: 376 SLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGA-ISLGKWV 434
            + +W+AM+ G  Q   +E+A+ +F ++    V PN  T SS+++AC+   A +  GK +
Sbjct: 469 DIVAWSAMLTGLAQTRDSEKAMEVFIQLVKEGVKPNEYTFSSVINACSSSAATVEHGKQI 528

Query: 435 HELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHG 494
           H         + + VS+AL+ MY+K GNI  A ++F     +  V+WN+MI+GYG HG  
Sbjct: 529 HATAVKSGKSNALCVSSALLTMYSKKGNIESAEKVFTRQEERDIVSWNSMITGYGQHGDA 588

Query: 495 LEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYAC 554
            +AL++F  M + G+    VTF+ VL AC+HAGLV EG++ F  MI D+      EHY+C
Sbjct: 589 KKALEVFQIMQNQGLPLDDVTFIGVLTACTHAGLVEEGEKYFNIMIKDYHIDKKIEHYSC 648

Query: 555 MVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPEN 614
           MVD+  RAG  +KA++ I G+     P +W  LL AC +H++  L ++A+EKL  L P +
Sbjct: 649 MVDLYSRAGMFDKAMDIINGMPFPASPTIWRTLLAACRVHRNLELGKLAAEKLVSLQPND 708

Query: 615 VGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQS 674
              +VLLSNI++   ++ + A VR+++ +RK+ K  GC+ IE+      F +GD  HP S
Sbjct: 709 AVGYVLLSNIHAVAGNWEEKAHVRKLMDERKVKKEAGCSWIEIKNRIFSFLAGDVSHPFS 768

Query: 675 TAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTE 734
             +YA LE+L+ K+++ G+Q +T    HDVEEE KE ++  HSE+LAIA+GLIA  PG  
Sbjct: 769 DLVYAKLEELSIKLKDMGYQPDTNYVFHDVEEEHKEAILSQHSERLAIAYGLIALPPGAP 828

Query: 735 IRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           I+I KNLR+C DCH   + IS +  R ++VRD+NRFHHFKGGVCSCG YW
Sbjct: 829 IQIEKNLRICGDCHNVIELISLIEERTLIVRDSNRFHHFKGGVCSCGGYW 878



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 148/544 (27%), Positives = 259/544 (47%), Gaps = 10/544 (1%)

Query: 59  YARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAA 118
           YA  LF   P  D+  +N ++  FS N   + ++  +  L  ++ L  D  T S  L   
Sbjct: 56  YAHQLFDETPLKDISHYNRLLFDFSRNNHDREALHLFKDLH-SSGLGVDGLTLSCALKVC 114

Query: 119 SACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWN 178
               D+ +G  +H  ++ SG+  D+ VG +LVD+Y K    +  R +FD+M  K+ V W 
Sbjct: 115 GVLFDQVVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWT 174

Query: 179 SMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLK 238
           S++SG  +N    + I +   M +  G   +  + A VL A+A+   +  G+++  + +K
Sbjct: 175 SLLSGYARNGLNDEVIHLINQM-QMEGVNPNGFTFATVLGALADESIIEGGVQVHAMIVK 233

Query: 239 LGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRL 298
            GF    +V   L+  Y K   V  AE +F  +V  D ++ N MI GY   G      ++
Sbjct: 234 NGFEFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQM 293

Query: 299 FRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSR 358
           F ++  +  +++ +     + +      L+ T  +H   +K+G      + TAL   YS+
Sbjct: 294 FHRMRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSK 353

Query: 359 LNEMEAARKLFD-ESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSS 417
            + ++ A KLF    +  ++ +W AMI G+ QN   E+A+ LF +M    V PN  T S+
Sbjct: 354 CSSVDEAFKLFSMADAAHNVVTWTAMIGGFVQNNNNEKAVDLFCQMSREGVRPNHFTYST 413

Query: 418 ILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKS 477
           +L+        SL   +H  +    +E    V+TAL+D Y K GN+VE+  +F  +  K 
Sbjct: 414 VLAGKPS----SLLSQLHAQIIKAYYEKVPSVATALLDAYVKTGNVVESARVFYSIPAKD 469

Query: 478 EVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYAC-SHAGLVREGDEIF 536
            V W+ M++G        +A+++F +++  G++P+  TF SV+ AC S A  V  G +I 
Sbjct: 470 IVAWSAMLTGLAQTRDSEKAMEVFIQLVKEGVKPNEYTFSSVINACSSSAATVEHGKQIH 529

Query: 537 QSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKD 596
            + +       L    A ++ +  + G +E A E +     E     W +++     H D
Sbjct: 530 ATAVKSGKSNALCVSSA-LLTMYSKKGNIESA-EKVFTRQEERDIVSWNSMITGYGQHGD 587

Query: 597 TNLA 600
              A
Sbjct: 588 AKKA 591



 Score = 90.1 bits (222), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 71/267 (26%), Positives = 130/267 (48%), Gaps = 6/267 (2%)

Query: 1   MSMKTPQSRNLFLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYA 60
           MS +  +  +   S +   K  S L+Q HAQII   ++   S  T L            +
Sbjct: 399 MSREGVRPNHFTYSTVLAGKPSSLLSQLHAQIIKAYYEKVPSVATALLDAYVKTGNVVES 458

Query: 61  RALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSA-AS 119
             +F+SIP  D+  ++ ++ G +     + ++  +  L K   + P+ +T+S V++A +S
Sbjct: 459 ARVFYSIPAKDIVAWSAMLTGLAQTRDSEKAMEVFIQLVKE-GVKPNEYTFSSVINACSS 517

Query: 120 ACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNS 179
           +      G  +H  A+ SG  + L V +AL+ +Y K   ++SA KVF +  E+D V WNS
Sbjct: 518 SAATVEHGKQIHATAVKSGKSNALCVSSALLTMYSKKGNIESAEKVFTRQEERDIVSWNS 577

Query: 180 MISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKL 239
           MI+G  ++   + ++ VF  +++N G  LD  +   VL A      +  G +   + +K 
Sbjct: 578 MITGYGQHGDAKKALEVF-QIMQNQGLPLDDVTFIGVLTACTHAGLVEEGEKYFNIMIK- 635

Query: 240 GFH--DHVYVLTGLVSFYSKCGEVERA 264
            +H    +   + +V  YS+ G  ++A
Sbjct: 636 DYHIDKKIEHYSCMVDLYSRAGMFDKA 662


>gi|125605235|gb|EAZ44271.1| hypothetical protein OsJ_28890 [Oryza sativa Japonica Group]
          Length = 630

 Score =  469 bits (1207), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 250/626 (39%), Positives = 369/626 (58%), Gaps = 17/626 (2%)

Query: 159 VKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLP 218
           V  AR  FD  PEKD V WN M++  ++N   +++  +F     N  T  D  S  A++ 
Sbjct: 22  VSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLF-----NSRTEWDVISWNALMS 76

Query: 219 AVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLIS 278
              +  ++    E + L  ++   D V     +VS Y++ G++  A  LF      D+ +
Sbjct: 77  GYVQWGKMS---EARELFDRMPGRD-VVSWNIMVSGYARRGDMVEARRLFDAAPVRDVFT 132

Query: 279 CNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCL 338
             A++SGY  NG  E + R+F    A  ER N+ +   ++  +     +     + +   
Sbjct: 133 WTAVVSGYAQNGMLEEARRVFD---AMPER-NAVSWNAMVAAYIQRRMMDEAKELFNMMP 188

Query: 339 KSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAIS 398
              + S +++LT     Y++   +E A+ +FD   +K   SW AM+A Y+Q G +EE + 
Sbjct: 189 CRNVASWNTMLTG----YAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQ 244

Query: 399 LFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYA 458
           LF EM       N    + +LS CA + A+  G  +H  +    +    +V  AL+ MY 
Sbjct: 245 LFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYF 304

Query: 459 KCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLS 518
           KCGN+ +AR  F+ M  +  V+WNTMI+GY  HG G EAL++F  M  +  +P  +T + 
Sbjct: 305 KCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVG 364

Query: 519 VLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVE 578
           VL ACSH+GLV +G   F SM HD G     EHY CM+D+LGRAG+L +A + +K +  E
Sbjct: 365 VLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFE 424

Query: 579 PGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVR 638
           P   +WGALLGA  IH++  L R A+EK+FEL+PEN G +VLLSNIY++   +  A  +R
Sbjct: 425 PDSTMWGALLGASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYASSGKWRDARKMR 484

Query: 639 QVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETV 698
            ++++R + K PG + IEV    H F++GD +HP+   IYA LE L+ +M++AG+ + T 
Sbjct: 485 VMMEERGVKKVPGFSWIEVQNKVHTFSAGDCVHPEKEKIYAFLEDLDMRMKKAGYVSATD 544

Query: 699 TALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVT 758
             LHDVEEEEKE M+K HSEKLA+A+G++   PG  IR+IKNLRVC DCH A K+IS + 
Sbjct: 545 MVLHDVEEEEKEHMLKYHSEKLAVAYGILNIPPGRPIRVIKNLRVCGDCHNAFKYISAIE 604

Query: 759 GRVIVVRDANRFHHFKGGVCSCGDYW 784
           GR+I++RD+NRFHHF+GG CSCGDYW
Sbjct: 605 GRLILLRDSNRFHHFRGGSCSCGDYW 630



 Score =  135 bits (341), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 103/450 (22%), Positives = 203/450 (45%), Gaps = 35/450 (7%)

Query: 67  IPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLS-----AASAC 121
           +P  D   +NV+I   +N+ +   +  ++    +  A++ +    ++V +     A    
Sbjct: 1   MPVRDSVTYNVMISSHANHGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLF 60

Query: 122 CDRSIGVLLHGHAIVSGY-----------------GSDLFVGAALVDLYFKFSWVKSARK 164
             R+   ++  +A++SGY                 G D+     +V  Y +   +  AR+
Sbjct: 61  NSRTEWDVISWNALMSGYVQWGKMSEARELFDRMPGRDVVSWNIMVSGYARRGDMVEARR 120

Query: 165 VFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMV-RNGGTWLDSTSVAAVLPAVAEV 223
           +FD  P +D   W +++SG  +N   +++  VF  M  RN  +W    +       + E 
Sbjct: 121 LFDAAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQRRMMDEA 180

Query: 224 QELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMI 283
           +EL   M  +          +V     +++ Y++ G +E A+ +F  + + D +S  AM+
Sbjct: 181 KELFNMMPCR----------NVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAML 230

Query: 284 SGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIV 343
           + Y+  G +E +L+LF ++    E VN S    ++        L     +H   +++G  
Sbjct: 231 AAYSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYG 290

Query: 344 SNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEM 403
               V  AL  +Y +   ME AR  F+E  E+ + SWN MIAGY ++G  +EA+ +F  M
Sbjct: 291 VGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMM 350

Query: 404 QASKVAPNPVTVSSILSACAQLGAISLG-KWVHELVKSRNFESNIYVSTALIDMYAKCGN 462
           + +   P+ +T+  +L+AC+  G +  G  + + +       +     T +ID+  + G 
Sbjct: 351 RTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGR 410

Query: 463 IVEARELFDLMSHKSEVT-WNTMISGYGLH 491
           + EA +L   M  + + T W  ++    +H
Sbjct: 411 LAEAHDLMKDMPFEPDSTMWGALLGASRIH 440



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 56/226 (24%), Positives = 108/226 (47%), Gaps = 4/226 (1%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           A+A+F ++P+ D   +  ++  +S     + ++  +  + +      +   ++ VLS  +
Sbjct: 211 AKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEWV-NRSAFACVLSTCA 269

Query: 120 ACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNS 179
                  G+ LHG  I +GYG   FVG AL+ +YFK   ++ AR  F++M E+D V WN+
Sbjct: 270 DIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNT 329

Query: 180 MISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGME-IQCLGLK 238
           MI+G  ++   ++++ +F DM+R   T  D  ++  VL A +    +  G+     +   
Sbjct: 330 MIAGYARHGFGKEALEIF-DMMRTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHHD 388

Query: 239 LGFHDHVYVLTGLVSFYSKCGEVERAELLFRDI-VRPDLISCNAMI 283
            G        T ++    + G +  A  L +D+   PD     A++
Sbjct: 389 FGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGALL 434


>gi|225432698|ref|XP_002278762.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14820
           [Vitis vinifera]
 gi|297737070|emb|CBI26271.3| unnamed protein product [Vitis vinifera]
          Length = 727

 Score =  469 bits (1206), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 249/654 (38%), Positives = 377/654 (57%), Gaps = 32/654 (4%)

Query: 162 ARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVA 221
           A  VF+ +P+ +T L N  +  L ++   + ++ V+  M R  G  +D  S   +L A++
Sbjct: 75  ALSVFNLIPKPETHLCNRFLRELSRSEEPEKTLLVYERM-RTQGLAVDRFSFPPLLKALS 133

Query: 222 EVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNA 281
            V+ L  G+EI  L  KLGF    +V TGLV  Y+ CG +  A L+F  +   D+++ + 
Sbjct: 134 RVKSLVEGLEIHGLAAKLGFDSDPFVQTGLVRMYAACGRIAEARLMFDKMFHRDVVTWSI 193

Query: 282 MISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSG 341
           MI GY  +G    +L LF ++       +   +  ++      G+L     IH F +++ 
Sbjct: 194 MIDGYCQSGLFNDALLLFEEMKNYNVEPDEMMLSTVLSACGRAGNLSYGKMIHDFIMENN 253

Query: 342 IVSNSSVLTALSTVY-------------------------------SRLNEMEAARKLFD 370
           IV +  + +AL T+Y                               S+L ++E AR +F+
Sbjct: 254 IVVDPHLQSALVTMYASCGSMDLALNLFEKMTPKNLVASTAMVTGYSKLGQIENARSVFN 313

Query: 371 ESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISL 430
           +  +K L  W+AMI+GY ++   +EA++LF EMQ+  + P+ VT+ S+++ACA LGA+  
Sbjct: 314 QMVKKDLVCWSAMISGYAESDSPQEALNLFNEMQSLGIKPDQVTMLSVITACAHLGALDQ 373

Query: 431 GKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGL 490
            KW+H  V    F   + ++ ALI+MYAKCG++  AR +FD M  K+ ++W  MIS + +
Sbjct: 374 AKWIHLFVDKNGFGGALPINNALIEMYAKCGSLERARRIFDKMPRKNVISWTCMISAFAM 433

Query: 491 HGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAE 550
           HG    AL+ F +M    I P+G+TF+ VLYACSHAGLV EG +IF SMI++H   P   
Sbjct: 434 HGDAGSALRFFHQMEDENIEPNGITFVGVLYACSHAGLVEEGRKIFYSMINEHNITPKHV 493

Query: 551 HYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFEL 610
           HY CMVD+ GRA  L +ALE ++ + + P   +WG+L+ AC +H +  L   A+++L EL
Sbjct: 494 HYGCMVDLFGRANLLREALELVEAMPLAPNVIIWGSLMAACRVHGEIELGEFAAKRLLEL 553

Query: 611 DPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQL 670
           DP++ G HV LSNIY+  R +     VR+++K + ++K  GC+  E+    H F   D+ 
Sbjct: 554 DPDHDGAHVFLSNIYAKARRWEDVGQVRKLMKHKGISKERGCSRFELNNEIHEFLVADRS 613

Query: 671 HPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATE 730
           H  +  IY  L ++  K++  G+   T + L D+EEEEK+ ++  HSEKLA+ +GL+   
Sbjct: 614 HKHADEIYEKLYEVVSKLKLVGYSPNTCSILVDLEEEEKKEVVLWHSEKLALCYGLMRDG 673

Query: 731 PGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
            G+ IRIIKNLRVC DCHT  K  SKV  R IVVRD  RFHH+K GVCSC DYW
Sbjct: 674 TGSCIRIIKNLRVCEDCHTFIKLASKVYEREIVVRDRTRFHHYKDGVCSCKDYW 727



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 138/520 (26%), Positives = 237/520 (45%), Gaps = 36/520 (6%)

Query: 7   QSRNLFLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATC-YARALFF 65
            S +   S L  A + + L Q HAQI+        S + KL        ++  YA ++F 
Sbjct: 21  HSHHTLFSALSSATSLTHLKQVHAQILRSKLDRSTSLLVKLVISSCALSSSLDYALSVFN 80

Query: 66  SIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRS 125
            IPKP+  L N  +R  S +E P+ ++  Y  +R    L  D F++  +L A S      
Sbjct: 81  LIPKPETHLCNRFLRELSRSEEPEKTLLVYERMR-TQGLAVDRFSFPPLLKALSRVKSLV 139

Query: 126 IGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLM 185
            G+ +HG A   G+ SD FV   LV +Y     +  AR +FDKM  +D V W+ MI G  
Sbjct: 140 EGLEIHGLAAKLGFDSDPFVQTGLVRMYAACGRIAEARLMFDKMFHRDVVTWSIMIDGYC 199

Query: 186 KNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLG---------------- 229
           ++  F D++ +F +M +N     D   ++ VL A      L  G                
Sbjct: 200 QSGLFNDALLLFEEM-KNYNVEPDEMMLSTVLSACGRAGNLSYGKMIHDFIMENNIVVDP 258

Query: 230 --------MEIQCLGLKLGFH-------DHVYVLTGLVSFYSKCGEVERAELLFRDIVRP 274
                   M   C  + L  +        ++   T +V+ YSK G++E A  +F  +V+ 
Sbjct: 259 HLQSALVTMYASCGSMDLALNLFEKMTPKNLVASTAMVTGYSKLGQIENARSVFNQMVKK 318

Query: 275 DLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIH 334
           DL+  +AMISGY  +   + +L LF ++ +   + +  T++ +I      G L     IH
Sbjct: 319 DLVCWSAMISGYAESDSPQEALNLFNEMQSLGIKPDQVTMLSVITACAHLGALDQAKWIH 378

Query: 335 SFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTE 394
            F  K+G      +  AL  +Y++   +E AR++FD+   K++ SW  MI+ +  +G   
Sbjct: 379 LFVDKNGFGGALPINNALIEMYAKCGSLERARRIFDKMPRKNVISWTCMISAFAMHGDAG 438

Query: 395 EAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWV-HELVKSRNFESNIYVSTAL 453
            A+  F +M+   + PN +T   +L AC+  G +  G+ + + ++   N          +
Sbjct: 439 SALRFFHQMEDENIEPNGITFVGVLYACSHAGLVEEGRKIFYSMINEHNITPKHVHYGCM 498

Query: 454 IDMYAKCGNIVEARELFDLMSHKSEV-TWNTMISGYGLHG 492
           +D++ +   + EA EL + M     V  W ++++   +HG
Sbjct: 499 VDLFGRANLLREALELVEAMPLAPNVIIWGSLMAACRVHG 538


>gi|414587344|tpg|DAA37915.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
 gi|414587345|tpg|DAA37916.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
          Length = 920

 Score =  469 bits (1206), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 267/782 (34%), Positives = 413/782 (52%), Gaps = 2/782 (0%)

Query: 3   MKTPQSRNLFLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARA 62
           + TP   +  LS     K  +Q    HAQ+    F ++      L      F +   A  
Sbjct: 141 IPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNALIALYLGFGSFKLAER 200

Query: 63  LFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACC 122
           +F  +   D   FN +I G +     + ++  +  ++  + L PD  T + +L+A ++  
Sbjct: 201 VFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQL-SGLRPDCVTVASLLAACASVG 259

Query: 123 DRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMIS 182
           D   G  LH + + +G   D     +L+DLY K   +++A  +F+     + VLWN M+ 
Sbjct: 260 DLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLV 319

Query: 183 GLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFH 242
              +      S  +FG M +  G   +  +   +L       ++ LG +I  L +K GF 
Sbjct: 320 AYGQISDLAKSFEIFGQM-QATGIHPNQFTYPCILRTCTCTGQIELGEQIHSLSIKNGFE 378

Query: 243 DHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQL 302
             +YV   L+  YSK G +++A  +   + + D++S  +MI+GY  +   E +L  F+++
Sbjct: 379 SDMYVSGVLIDMYSKYGCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKEM 438

Query: 303 LASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEM 362
                  ++  +            +     IH+    SG  ++ S+   L  +Y+R    
Sbjct: 439 QDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSGYAADISIWNTLVNLYARCGRS 498

Query: 363 EAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSAC 422
           E A  LF E   K   +WN +I+G+ Q+ L ++A+ +F +M  +    N  T  S +SA 
Sbjct: 499 EEAFSLFREIEHKDEITWNGLISGFGQSRLYKQALMVFMKMGQAGAKYNVFTFISAISAL 558

Query: 423 AQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWN 482
           A L  I  GK VH         S   V+ ALI +Y KCG+I +A+ +F  MS ++EV+WN
Sbjct: 559 ANLADIKQGKQVHGRAVKTGHTSETEVANALISLYGKCGSIEDAKMIFSEMSLRNEVSWN 618

Query: 483 TMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHD 542
           T+I+    HG GLEAL LF +M   G++P+ VTF+ VL ACSH GLV EG   F+SM + 
Sbjct: 619 TIITSCSQHGRGLEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSNV 678

Query: 543 HGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARV 602
           +G  P+ +HYAC+VDILGRAGQL++A  F+  + +     +W  LL AC +HK+  +  +
Sbjct: 679 YGLNPIPDHYACVVDILGRAGQLDRARRFVDEMPITANAMIWRTLLSACKVHKNIEIGEL 738

Query: 603 ASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPH 662
           A++ L EL+P +   +VLLSN Y+    +     VR+++K R + K PG + IEV    H
Sbjct: 739 AAKHLLELEPHDSASYVLLSNAYAVTGKWANRDQVRKMMKDRGIRKEPGRSWIEVKNAVH 798

Query: 663 VFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAI 722
            F  GD+LHP S  IY  L +LN ++ + G++ E     H+ E+E+K+    VHSEKLA+
Sbjct: 799 AFFVGDRLHPLSDQIYKFLSELNDRLSKIGYKQENPNLFHEKEQEQKDPTAFVHSEKLAV 858

Query: 723 AFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGD 782
           AFGL+   P   +R+IKNLRVC DCH+  K  S+VT R IV+RD  RFHHF  G CSCGD
Sbjct: 859 AFGLMTLPPCIPLRVIKNLRVCDDCHSWMKCTSEVTRREIVLRDVYRFHHFNSGSCSCGD 918

Query: 783 YW 784
           YW
Sbjct: 919 YW 920



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 136/495 (27%), Positives = 237/495 (47%), Gaps = 31/495 (6%)

Query: 104 LTPDNFTYSFVLSAASACCDRSIG---------------------VLLHGHAIVSGYGSD 142
           + PDN      L AA A   R++G                     + +H  ++V G G+D
Sbjct: 18  IVPDNPEKILSLVAAKASHHRALGSADLTCALQACRGRGNRWPLVLEIHATSVVRGLGAD 77

Query: 143 LFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVR 202
             +G  L+DLY K   V  AR+VF ++  +D V W +M+SG  ++   +++  ++  M  
Sbjct: 78  RLIGNLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQSGLGKEAFRLYSQM-- 135

Query: 203 NGGTWLDSTS----VAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKC 258
               W         +++VL A  + +    G  I     K  F    +V   L++ Y   
Sbjct: 136 ---HWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNALIALYLGF 192

Query: 259 GEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLI 318
           G  + AE +F D++  D ++ N +ISG+   G  E +L++F ++  S  R +  T+  L+
Sbjct: 193 GSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLL 252

Query: 319 PVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLA 378
                 G L     +HS+ LK+G+  +     +L  +Y +  ++E A  +F+     ++ 
Sbjct: 253 AACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIFNLGDRTNVV 312

Query: 379 SWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELV 438
            WN M+  Y Q     ++  +F +MQA+ + PN  T   IL  C   G I LG+ +H L 
Sbjct: 313 LWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNQFTYPCILRTCTCTGQIELGEQIHSLS 372

Query: 439 KSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEAL 498
               FES++YVS  LIDMY+K G + +AR++ +++  +  V+W +MI+GY  H    EAL
Sbjct: 373 IKNGFESDMYVSGVLIDMYSKYGCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEAL 432

Query: 499 QLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDI 558
             F EM   G+ P  +   S   AC+    +R+G +I  + ++  G+      +  +V++
Sbjct: 433 ATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQI-HARVYVSGYAADISIWNTLVNL 491

Query: 559 LGRAGQLEKALEFIK 573
             R G+ E+A    +
Sbjct: 492 YARCGRSEEAFSLFR 506



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 85/259 (32%), Positives = 139/259 (53%), Gaps = 4/259 (1%)

Query: 333 IHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGL 392
           IH+  +  G+ ++  +   L  +Y++   +  AR++F E S +   SW AM++GY Q+GL
Sbjct: 65  IHATSVVRGLGADRLIGNLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQSGL 124

Query: 393 TEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTA 452
            +EA  L+ +M  + V P P  +SS+LSAC +    + G+ +H  V  + F S  +V  A
Sbjct: 125 GKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNA 184

Query: 453 LIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPS 512
           LI +Y   G+   A  +F  M     VT+NT+ISG+   GHG  ALQ+F EM  SG+RP 
Sbjct: 185 LIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPD 244

Query: 513 GVTFLSVLYACSHAGLVREGDEIFQSMIH-DHGFKPLAEHYACMVDILGRAGQLEKALEF 571
            VT  S+L AC+  G +++G ++   ++     F  + E    ++D+  + G +E A + 
Sbjct: 245 CVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITE--GSLLDLYVKCGDIETAHD- 301

Query: 572 IKGLAVEPGPAVWGALLGA 590
           I  L       +W  +L A
Sbjct: 302 IFNLGDRTNVVLWNLMLVA 320


>gi|125544467|gb|EAY90606.1| hypothetical protein OsI_12205 [Oryza sativa Indica Group]
          Length = 818

 Score =  469 bits (1206), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 259/725 (35%), Positives = 403/725 (55%), Gaps = 21/725 (2%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           AR LF  +P+ ++  F  +++  +     +++   +  LR       + F  + +L  A 
Sbjct: 115 ARRLFDRMPERNMVSFVTLVQAHAQRGDFEAAAALFRRLRWE-GHEVNQFVLTTMLKLAI 173

Query: 120 ACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNS 179
           A     +   +H  A   G+  + FVG+ L+D Y   S V  A  VF+ +  KD V+W +
Sbjct: 174 AMDAAGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTA 233

Query: 180 MISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKL 239
           M+S   +N C +++                  + +  L A++  ++   G  I+ L    
Sbjct: 234 MVSCYSENDCPENAF---------------RCAQSCSLLAISCARQGIHGCAIKTLN--- 275

Query: 240 GFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLF 299
                 +V   L+  Y+KCG+++ A L F  I   D+I  + MIS Y  + + E +  LF
Sbjct: 276 --DTEPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELF 333

Query: 300 RQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRL 359
            +L+ S+   N  ++  ++        L     IH+  +K G  S+  V  AL   Y++ 
Sbjct: 334 LRLMRSSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKC 393

Query: 360 NEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSIL 419
           N+M+++ K+F    + +  SWN ++ G++Q+GL EEA+S+F EMQA+++    VT SS+L
Sbjct: 394 NDMDSSLKIFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVL 453

Query: 420 SACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEV 479
            ACA   +I     +H  ++   F ++  +  +LID YAKCG I +A ++F  +  +  +
Sbjct: 454 RACASTASIRHAGQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHLMERDII 513

Query: 480 TWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSM 539
           +WN +ISGY LHG   +AL+LF  M  S +  + +TF+++L  C   GLV  G  +F SM
Sbjct: 514 SWNAIISGYALHGQAADALELFDRMNKSNVESNDITFVALLSVCCSTGLVNHGLSLFDSM 573

Query: 540 IHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNL 599
             DHG KP  EHY C+V +LGRAG+L  AL+FI  +   P   VW ALL +C+IHK+  L
Sbjct: 574 RIDHGIKPSMEHYTCIVRLLGRAGRLNDALQFIGDIPSAPSAMVWRALLSSCIIHKNVAL 633

Query: 600 ARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGG 659
            R ++EK+ E++P++   +VLLSN+Y+A     Q A +R+ ++   + K PG + +E+ G
Sbjct: 634 GRFSAEKILEIEPQDETTYVLLSNMYAAAGSLDQVALLRKSMRNIGVRKVPGLSWVEIKG 693

Query: 660 TPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEK 719
             H F+ G   HP    I AMLE LN K    G+  +    LHDV++E+K  M+ VHSE+
Sbjct: 694 EIHAFSVGSVDHPDMRVINAMLEWLNLKTSREGYIPDINVVLHDVDKEQKTRMLWVHSER 753

Query: 720 LAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCS 779
           LA+A+GL+ T PG  IRI+KNLR CLDCHTA   ISK+  R I+VRD NRFHHF+ G CS
Sbjct: 754 LALAYGLVMTPPGHPIRILKNLRSCLDCHTAFTVISKIVKREIIVRDINRFHHFEDGKCS 813

Query: 780 CGDYW 784
           CGDYW
Sbjct: 814 CGDYW 818



 Score =  176 bits (447), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 140/494 (28%), Positives = 233/494 (47%), Gaps = 32/494 (6%)

Query: 107 DNFTYSFVLSAASACCDRSIGVLLHGHAIV-SGYGS-DLFVGAALVDLYFKFSWVKSARK 164
           D+F  +  L    A  D   G  +HGH +   G G  DLF    L+++Y K   + SAR+
Sbjct: 58  DSFACARQLQGCIARGDARGGRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLGPLASARR 117

Query: 165 VFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQ 224
           +FD+MPE++ V + +++    +   F+ +  +F  + R  G  ++   +  +L     + 
Sbjct: 118 LFDRMPERNMVSFVTLVQAHAQRGDFEAAAALFRRL-RWEGHEVNQFVLTTMLKLAIAMD 176

Query: 225 ELRLGMEIQCLGLKLGFHDH-VYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMI 283
              L   +     KLG HDH  +V +GL+  YS C  V  AE +F  IVR D +   AM+
Sbjct: 177 AAGLAGGVHSCAWKLG-HDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMV 235

Query: 284 SGYTCNGKTESSLRLFR--QLLA-SAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKS 340
           S Y+ N   E++ R  +   LLA S  R                        IH   +K+
Sbjct: 236 SCYSENDCPENAFRCAQSCSLLAISCARQG----------------------IHGCAIKT 273

Query: 341 GIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLF 400
              +   V  AL  +Y++  +++ AR  F+      +   + MI+ Y Q+   E+A  LF
Sbjct: 274 LNDTEPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELF 333

Query: 401 QEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKC 460
             +  S V PN  ++SS+L AC  +  +  GK +H        ES+++V  AL+D YAKC
Sbjct: 334 LRLMRSSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKC 393

Query: 461 GNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVL 520
            ++  + ++F  +   +EV+WNT++ G+   G G EAL +F EM  + +  + VT+ SVL
Sbjct: 394 NDMDSSLKIFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVL 453

Query: 521 YACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPG 580
            AC+    +R   +I  S I    F         ++D   + G +  AL+  + L +E  
Sbjct: 454 RACASTASIRHAGQIHCS-IEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHL-MERD 511

Query: 581 PAVWGALLGACMIH 594
              W A++    +H
Sbjct: 512 IISWNAIISGYALH 525



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 91/358 (25%), Positives = 153/358 (42%), Gaps = 42/358 (11%)

Query: 207 WL-DSTSVAAVLPAVAEVQELRLGMEIQ-CL--GLKLG---FHDHVYVLTG--------- 250
           WL D  +  A+LP+V  V       ++Q C+  G   G    H HV    G         
Sbjct: 40  WLEDELTSLAILPSVPGVDSFACARQLQGCIARGDARGGRAVHGHVVRRGGVGRLDLFCA 99

Query: 251 --LVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAER 308
             L++ Y K G +  A  LF  +   +++S   ++  +   G  E++  LFR+L      
Sbjct: 100 NVLLNMYGKLGPLASARRLFDRMPERNMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHE 159

Query: 309 VNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKL 368
           VN   +  ++ +        L   +HS   K G   N+ V + L   YS  + +  A  +
Sbjct: 160 VNQFVLTTMLKLAIAMDAAGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHV 219

Query: 369 FDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAI 428
           F+    K    W AM++ Y++N   E A    Q            + S +  +CA+ G  
Sbjct: 220 FNGIVRKDAVVWTAMVSCYSENDCPENAFRCAQ------------SCSLLAISCARQG-- 265

Query: 429 SLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGY 488
                +H        ++  +V  AL+DMYAKCG+I +AR  F+++ +   +  + MIS Y
Sbjct: 266 -----IHGCAIKTLNDTEPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRY 320

Query: 489 GLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFK 546
                  +A +LF  ++ S + P+  +  SVL AC++   +      F   IH+H  K
Sbjct: 321 AQSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQACTNMVQLD-----FGKQIHNHAIK 373


>gi|225453758|ref|XP_002270092.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Vitis vinifera]
          Length = 687

 Score =  469 bits (1206), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 239/625 (38%), Positives = 378/625 (60%), Gaps = 3/625 (0%)

Query: 162 ARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVA 221
           ARK+F +M   D  + N+MI G  ++    +++ ++  MV  G   +D+ +   VL A A
Sbjct: 64  ARKLFTQMQNPDPFICNTMIRGYARSQNPYEAVSLYYFMVERG-VPVDNYTYPFVLAACA 122

Query: 222 EVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNA 281
            +  ++LG    C  LK GF   ++V+  L+ FY  CG    A  +F +    D+++ N 
Sbjct: 123 RLGAVKLGRRFHCEVLKNGFGSDLFVINALIQFYHNCGSFGCACDVFDESTVRDVVTWNI 182

Query: 282 MISGYTCNGKTESSLRLFRQLLASAE-RVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKS 340
           MI+ +   G +E +  L  ++      R +  T+V L+P     G+L     +HS+  + 
Sbjct: 183 MINAHLNKGLSEKAFDLLDEMTKLDNLRPDEVTMVSLVPACAQLGNLERGKFLHSYSKEL 242

Query: 341 GIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLF 400
           G+  N  V  A+  +Y + +++E+A+++F+   EK + SW +M++G  ++G  +EA++LF
Sbjct: 243 GLDENLRVNNAILDMYCKCDDIESAQEVFNRIREKDVLSWTSMLSGLAKSGYFQEALALF 302

Query: 401 QEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKC 460
           Q+MQ +K+  + +T+  +LSACAQ GA+  GK++H L+       ++ + TAL+DMYAKC
Sbjct: 303 QKMQLNKIELDEITLVGVLSACAQTGALDQGKYIHLLIDKFEINCDLVLETALVDMYAKC 362

Query: 461 GNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVL 520
           G+I  A ++F  M  ++  TWN +I G  +HGHG +A+ LF +M H  + P  VTF+++L
Sbjct: 363 GSIDLALQVFRRMRVRNVFTWNALIGGLAMHGHGEDAISLFDQMEHDKLMPDDVTFIALL 422

Query: 521 YACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPG 580
            ACSHAGLV EG  +FQ+M +    +P  EHY C+VD+L RA +++ AL FI+ + ++  
Sbjct: 423 CACSHAGLVDEGLAMFQAMKNKFQIEPRMEHYGCVVDLLCRARKVDDALAFIENMPIKAN 482

Query: 581 PAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQV 640
             +W  LLGAC      +LA     ++ EL+P++ G +V+LSN+Y+    +  A  +R+ 
Sbjct: 483 SVLWATLLGACRSGGHFDLAEKIGRRVIELEPDSCGRYVMLSNLYAGVSQWDHALKLRKQ 542

Query: 641 VKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMR-EAGFQTETVT 699
           +K + + K PGC+ IE+ G  H F +GD+ H Q+  IYAM+E++  ++  + G    T  
Sbjct: 543 MKNKGIEKTPGCSWIELNGMIHQFVAGDRSHLQTEQIYAMIEEMTRRVNLDGGHVPGTAN 602

Query: 700 ALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTG 759
            L D+EEEEKE  + +HSEKLAIA GLI+T  G+ IRI+KNLRVC DCH+  K  SKV  
Sbjct: 603 VLFDIEEEEKEHSLFLHSEKLAIALGLISTPSGSPIRIVKNLRVCNDCHSFLKVTSKVYN 662

Query: 760 RVIVVRDANRFHHFKGGVCSCGDYW 784
           R IV RD +RFHHFK G CSC D+W
Sbjct: 663 REIVARDRSRFHHFKEGSCSCMDFW 687



 Score =  195 bits (495), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 129/484 (26%), Positives = 240/484 (49%), Gaps = 12/484 (2%)

Query: 14  SLLKGAKTQSQLTQTHAQIIIHG--FQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPD 71
           S+ K  +  + L +TH   ++H   F + L +   L+H   D     YAR LF  +  PD
Sbjct: 23  SISKTKQAHALLLRTH---LLHNPLFSSKLISFLALSHS-GDLN---YARKLFTQMQNPD 75

Query: 72  LFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLH 131
            F+ N +IRG++ ++ P  ++  Y +      +  DN+TY FVL+A +      +G   H
Sbjct: 76  PFICNTMIRGYARSQNPYEAVSLY-YFMVERGVPVDNYTYPFVLAACARLGAVKLGRRFH 134

Query: 132 GHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQ 191
              + +G+GSDLFV  AL+  Y        A  VFD+   +D V WN MI+  +     +
Sbjct: 135 CEVLKNGFGSDLFVINALIQFYHNCGSFGCACDVFDESTVRDVVTWNIMINAHLNKGLSE 194

Query: 192 DSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGL 251
            +  +  +M +      D  ++ +++PA A++  L  G  +     +LG  +++ V   +
Sbjct: 195 KAFDLLDEMTKLDNLRPDEVTMVSLVPACAQLGNLERGKFLHSYSKELGLDENLRVNNAI 254

Query: 252 VSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNS 311
           +  Y KC ++E A+ +F  I   D++S  +M+SG   +G  + +L LF+++  +   ++ 
Sbjct: 255 LDMYCKCDDIESAQEVFNRIREKDVLSWTSMLSGLAKSGYFQEALALFQKMQLNKIELDE 314

Query: 312 STIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDE 371
            T+VG++      G L     IH    K  I  +  + TAL  +Y++   ++ A ++F  
Sbjct: 315 ITLVGVLSACAQTGALDQGKYIHLLIDKFEINCDLVLETALVDMYAKCGSIDLALQVFRR 374

Query: 372 SSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLG 431
              +++ +WNA+I G   +G  E+AISLF +M+  K+ P+ VT  ++L AC+  G +  G
Sbjct: 375 MRVRNVFTWNALIGGLAMHGHGEDAISLFDQMEHDKLMPDDVTFIALLCACSHAGLVDEG 434

Query: 432 KWVHELVKSR-NFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSE-VTWNTMISGYG 489
             + + +K++   E  +     ++D+  +   + +A    + M  K+  V W T++    
Sbjct: 435 LAMFQAMKNKFQIEPRMEHYGCVVDLLCRARKVDDALAFIENMPIKANSVLWATLLGACR 494

Query: 490 LHGH 493
             GH
Sbjct: 495 SGGH 498



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 82/286 (28%), Positives = 134/286 (46%), Gaps = 12/286 (4%)

Query: 311 SSTIVGLIPVFYPFGH---LHLTNCIHSFCLKSGIVSN----SSVLTALSTVYSRLNEME 363
           SS    LI V +   H   +  T   H+  L++ ++ N    S +++ L+  +S   ++ 
Sbjct: 5   SSKCTKLISVDFLKTHCTSISKTKQAHALLLRTHLLHNPLFSSKLISFLALSHS--GDLN 62

Query: 364 AARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACA 423
            ARKLF +         N MI GY ++    EA+SL+  M    V  +  T   +L+ACA
Sbjct: 63  YARKLFTQMQNPDPFICNTMIRGYARSQNPYEAVSLYYFMVERGVPVDNYTYPFVLAACA 122

Query: 424 QLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNT 483
           +LGA+ LG+  H  V    F S+++V  ALI  Y  CG+   A ++FD  + +  VTWN 
Sbjct: 123 RLGAVKLGRRFHCEVLKNGFGSDLFVINALIQFYHNCGSFGCACDVFDESTVRDVVTWNI 182

Query: 484 MISGYGLHGHGLEALQLFSEMLH-SGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHD 542
           MI+ +   G   +A  L  EM     +RP  VT +S++ AC+  G +  G +   S   +
Sbjct: 183 MINAHLNKGLSEKAFDLLDEMTKLDNLRPDEVTMVSLVPACAQLGNLERG-KFLHSYSKE 241

Query: 543 HGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALL 588
            G          ++D+  +   +E A E    +  E     W ++L
Sbjct: 242 LGLDENLRVNNAILDMYCKCDDIESAQEVFNRIR-EKDVLSWTSML 286


>gi|357508407|ref|XP_003624492.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355499507|gb|AES80710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1125

 Score =  468 bits (1205), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 251/726 (34%), Positives = 419/726 (57%), Gaps = 3/726 (0%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           AR LF S+ +     + ++I G++ N   + +   +  + ++  + PD+ + + +LS  +
Sbjct: 151 ARTLFDSMFQRTAVTWTMLIGGYAQNNQFREAFGLFIEMGRH-GIDPDHVSLATLLSGFT 209

Query: 120 ACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNS 179
                +    +H H I  GY S L V  +L+D Y K   +  A ++F+ +PE+D+V +N+
Sbjct: 210 EFDSVNEVRQVHSHVIKLGYDSTLVVSNSLLDSYCKTRSLGLAFQLFNDIPERDSVTFNA 269

Query: 180 MISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKL 239
           +++G  K    +++I +F  M   G    + T  AA+L A  ++ ++  G ++    +K 
Sbjct: 270 LLTGYSKEGFNREAINLFFKMQEVGYRPTEFT-FAAILTAGIQLDDIEFGQQVHGFVVKC 328

Query: 240 GFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLF 299
            F  +V+V   L+ FYSK   V  A  LF ++   D IS N +++ Y  NG+ + SL LF
Sbjct: 329 NFVWNVFVANALLDFYSKHDRVVEASKLFYEMPEVDGISYNVLVTCYAWNGRVKESLELF 388

Query: 300 RQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRL 359
           ++L  +     +     L+ +     +L +   IHS  + +  +S   V  +L  +Y++ 
Sbjct: 389 KELQFTGFDRRNFPFATLLSIAAISLNLDIGRQIHSQTIVTDAISEILVGNSLVDMYAKC 448

Query: 360 NEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSIL 419
            E   A ++F + + +S   W AMI+ Y Q GL E+ + LF EMQ +K+  +  T +SI+
Sbjct: 449 GEFGEANRIFSDLAIQSSVPWTAMISSYVQKGLHEDGLKLFVEMQRAKIGADAATYASIV 508

Query: 420 SACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEV 479
            ACA L +++LGK +H  +    + SN++  +AL+DMYAKCG+I +A ++F  M  ++ V
Sbjct: 509 RACASLASLTLGKQLHSHIIGSGYISNVFSGSALVDMYAKCGSIKDALQMFQEMPVRNSV 568

Query: 480 TWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSM 539
           +WN +IS Y  +G G   L+LF EM+ SG++P  V+ LS+L ACSH GLV EG + F SM
Sbjct: 569 SWNALISAYAQNGDGDCTLRLFEEMVRSGLQPDSVSLLSILCACSHCGLVEEGLQYFDSM 628

Query: 540 IHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNL 599
              +   P  EHYA  +D+L R G+ ++A + +  +  EP   +W ++L +C IHK+  L
Sbjct: 629 TRIYKLVPKKEHYASTIDMLCRGGRFDEAEKLMAQMPFEPDEIMWSSVLNSCGIHKNQEL 688

Query: 600 ARVASEKLFELDP-ENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVG 658
           A+ A+ +LF +    +   +V +SNIY+A  ++     V++ +++R + K P  + +E+ 
Sbjct: 689 AKKAANQLFNMKVLRDAAPYVTMSNIYAAAGEWDNVGKVKKAMRERGVKKVPAYSWVEIK 748

Query: 659 GTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSE 718
              HVFT+ D+ HPQ   I   L++L  KM + G++ ++  ALH+V+EE K   +K HSE
Sbjct: 749 HKTHVFTANDKTHPQMREIMKKLDELEEKMVKKGYKPDSSCALHNVDEEVKVESLKYHSE 808

Query: 719 KLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVC 778
           ++AIAF LI+T  G+ I ++KNLR C DCH A K ISK+  R I VRD++RFHHF+ G C
Sbjct: 809 RIAIAFALISTPEGSPILVMKNLRACTDCHAAIKVISKIVRREITVRDSSRFHHFRDGFC 868

Query: 779 SCGDYW 784
           +C DYW
Sbjct: 869 TCRDYW 874



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 129/479 (26%), Positives = 230/479 (48%), Gaps = 20/479 (4%)

Query: 23  SQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGF 82
           +++ Q H+ +I  G+ + L     L       ++   A  LF  IP+ D   FN ++ G+
Sbjct: 215 NEVRQVHSHVIKLGYDSTLVVSNSLLDSYCKTRSLGLAFQLFNDIPERDSVTFNALLTGY 274

Query: 83  SNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSD 142
           S     + +I  +  +++     P  FT++ +L+A     D   G  +HG  +   +  +
Sbjct: 275 SKEGFNREAINLFFKMQE-VGYRPTEFTFAAILTAGIQLDDIEFGQQVHGFVVKCNFVWN 333

Query: 143 LFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVR 202
           +FV  AL+D Y K   V  A K+F +MPE D + +N +++    N   ++S+ +F ++  
Sbjct: 334 VFVANALLDFYSKHDRVVEASKLFYEMPEVDGISYNVLVTCYAWNGRVKESLELFKELQF 393

Query: 203 NGGTWLDSTSVA-AVLPAVAEVQ-ELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGE 260
            G    D  +   A L ++A +   L +G +I    +       + V   LV  Y+KCGE
Sbjct: 394 TG---FDRRNFPFATLLSIAAISLNLDIGRQIHSQTIVTDAISEILVGNSLVDMYAKCGE 450

Query: 261 VERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPV 320
              A  +F D+     +   AMIS Y   G  E  L+LF ++  +    +++T   ++  
Sbjct: 451 FGEANRIFSDLAIQSSVPWTAMISSYVQKGLHEDGLKLFVEMQRAKIGADAATYASIVRA 510

Query: 321 FYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASW 380
                 L L   +HS  + SG +SN    +AL  +Y++   ++ A ++F E   ++  SW
Sbjct: 511 CASLASLTLGKQLHSHIIGSGYISNVFSGSALVDMYAKCGSIKDALQMFQEMPVRNSVSW 570

Query: 381 NAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLG-------KW 433
           NA+I+ Y QNG  +  + LF+EM  S + P+ V++ SIL AC+  G +  G         
Sbjct: 571 NALISAYAQNGDGDCTLRLFEEMVRSGLQPDSVSLLSILCACSHCGLVEEGLQYFDSMTR 630

Query: 434 VHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHK-SEVTWNTMISGYGLH 491
           +++LV  +      Y ST  IDM  + G   EA +L   M  +  E+ W+++++  G+H
Sbjct: 631 IYKLVPKKEH----YAST--IDMLCRGGRFDEAEKLMAQMPFEPDEIMWSSVLNSCGIH 683



 Score =  180 bits (457), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 129/480 (26%), Positives = 223/480 (46%), Gaps = 13/480 (2%)

Query: 142 DLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMV 201
           ++F    ++  Y K   +  AR +FD M ++  V W  +I G  +N  F+++  +F +M 
Sbjct: 131 NIFSTNTMIMGYIKSGNLSEARTLFDSMFQRTAVTWTMLIGGYAQNNQFREAFGLFIEMG 190

Query: 202 RNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEV 261
           R+G    D  S+A +L    E   +    ++    +KLG+   + V   L+  Y K   +
Sbjct: 191 RHGID-PDHVSLATLLSGFTEFDSVNEVRQVHSHVIKLGYDSTLVVSNSLLDSYCKTRSL 249

Query: 262 ERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVF 321
             A  LF DI   D ++ NA+++GY+  G    ++ LF ++     R    T   ++   
Sbjct: 250 GLAFQLFNDIPERDSVTFNALLTGYSKEGFNREAINLFFKMQEVGYRPTEFTFAAILTAG 309

Query: 322 YPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWN 381
                +     +H F +K   V N  V  AL   YS+ + +  A KLF E  E    S+N
Sbjct: 310 IQLDDIEFGQQVHGFVVKCNFVWNVFVANALLDFYSKHDRVVEASKLFYEMPEVDGISYN 369

Query: 382 AMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSR 441
            ++  Y  NG  +E++ LF+E+Q +         +++LS  A    + +G+ +H      
Sbjct: 370 VLVTCYAWNGRVKESLELFKELQFTGFDRRNFPFATLLSIAAISLNLDIGRQIHSQTIVT 429

Query: 442 NFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLF 501
           +  S I V  +L+DMYAKCG   EA  +F  ++ +S V W  MIS Y   G   + L+LF
Sbjct: 430 DAISEILVGNSLVDMYAKCGEFGEANRIFSDLAIQSSVPWTAMISSYVQKGLHEDGLKLF 489

Query: 502 SEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGR 561
            EM  + I     T+ S++ AC+    +  G ++  S I   G+       + +VD+  +
Sbjct: 490 VEMQRAKIGADAATYASIVRACASLASLTLGKQL-HSHIIGSGYISNVFSGSALVDMYAK 548

Query: 562 AGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFE------LDPENV 615
            G ++ AL+  + + V      W AL+ A   + D +     + +LFE      L P++V
Sbjct: 549 CGSIKDALQMFQEMPVR-NSVSWNALISAYAQNGDGD----CTLRLFEEMVRSGLQPDSV 603



 Score =  139 bits (351), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 93/359 (25%), Positives = 177/359 (49%), Gaps = 7/359 (1%)

Query: 242 HDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQ 301
           H +++    ++  Y K G +  A  LF  + +   ++   +I GY  N +   +  LF +
Sbjct: 129 HKNIFSTNTMIMGYIKSGNLSEARTLFDSMFQRTAVTWTMLIGGYAQNNQFREAFGLFIE 188

Query: 302 LLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNE 361
           +       +  ++  L+  F  F  ++    +HS  +K G  S   V  +L   Y +   
Sbjct: 189 MGRHGIDPDHVSLATLLSGFTEFDSVNEVRQVHSHVIKLGYDSTLVVSNSLLDSYCKTRS 248

Query: 362 MEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSA 421
           +  A +LF++  E+   ++NA++ GY++ G   EAI+LF +MQ     P   T ++IL+A
Sbjct: 249 LGLAFQLFNDIPERDSVTFNALLTGYSKEGFNREAINLFFKMQEVGYRPTEFTFAAILTA 308

Query: 422 CAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTW 481
             QL  I  G+ VH  V   NF  N++V+ AL+D Y+K   +VEA +LF  M     +++
Sbjct: 309 GIQLDDIEFGQQVHGFVVKCNFVWNVFVANALLDFYSKHDRVVEASKLFYEMPEVDGISY 368

Query: 482 NTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIF-QSMI 540
           N +++ Y  +G   E+L+LF E+  +G       F ++L   + +  +  G +I  Q+++
Sbjct: 369 NVLVTCYAWNGRVKESLELFKELQFTGFDRRNFPFATLLSIAAISLNLDIGRQIHSQTIV 428

Query: 541 HDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACM---IHKD 596
            D   + L  +   +VD+  + G+  +A      LA++     W A++ + +   +H+D
Sbjct: 429 TDAISEILVGN--SLVDMYAKCGEFGEANRIFSDLAIQ-SSVPWTAMISSYVQKGLHED 484



 Score =  102 bits (253), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 75/293 (25%), Positives = 130/293 (44%), Gaps = 48/293 (16%)

Query: 284 SGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIV 343
           +G+  + + E +L L   ++    R   +T+        P  HLH+   I    +K+G  
Sbjct: 49  AGHFGSKQYELTLSLMNNIIKPCTRNLVTTLTA------PKPHLHVDASI----IKTGFN 98

Query: 344 SNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLAS------------------------ 379
            N+     L   + +  ++  ARKLFDE   K++ S                        
Sbjct: 99  PNTYRSNFLVKSFLQRGDLNGARKLFDEMPHKNIFSTNTMIMGYIKSGNLSEARTLFDSM 158

Query: 380 -------WNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGK 432
                  W  +I GY QN    EA  LF EM    + P+ V+++++LS   +  +++  +
Sbjct: 159 FQRTAVTWTMLIGGYAQNNQFREAFGLFIEMGRHGIDPDHVSLATLLSGFTEFDSVNEVR 218

Query: 433 WVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHG 492
            VH  V    ++S + VS +L+D Y K  ++  A +LF+ +  +  VT+N +++GY   G
Sbjct: 219 QVHSHVIKLGYDSTLVVSNSLLDSYCKTRSLGLAFQLFNDIPERDSVTFNALLTGYSKEG 278

Query: 493 HGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGF 545
              EA+ LF +M   G RP+  TF ++L A      +  G ++       HGF
Sbjct: 279 FNREAINLFFKMQEVGYRPTEFTFAAILTAGIQLDDIEFGQQV-------HGF 324



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 35/105 (33%), Positives = 50/105 (47%), Gaps = 5/105 (4%)

Query: 443 FESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFS 502
           F  N Y S  L+  + + G++  AR+LFD M HK+  + NTMI GY   G+  EA  LF 
Sbjct: 97  FNPNTYRSNFLVKSFLQRGDLNGARKLFDEMPHKNIFSTNTMIMGYIKSGNLSEARTLFD 156

Query: 503 EMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKP 547
            M       + VT+  ++   +     RE   +F  M   HG  P
Sbjct: 157 SMFQR----TAVTWTMLIGGYAQNNQFREAFGLFIEM-GRHGIDP 196


>gi|347954514|gb|AEP33757.1| organelle transcript processing 82, partial [Aethionema
           cordifolium]
          Length = 679

 Score =  468 bits (1205), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 257/656 (39%), Positives = 379/656 (57%), Gaps = 34/656 (5%)

Query: 156 FSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAA 215
           F  +  A  VF  + E + + WN+MI G   +     ++ ++  M+  G +  +S +   
Sbjct: 25  FHGLPYAISVFKSIQEPNQLSWNTMIRGHALSSDPISALNLYVYMISLGLS-PNSYTFPF 83

Query: 216 VLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLF-----RD 270
           +  + A+ +  + G +I    LK G    ++V T L+S Y++ G VE A  +F     RD
Sbjct: 84  LFKSCAKSKAAQEGKQIHAQILKYGLTVDLHVHTSLISMYAQNGIVEDAHKVFDTSSHRD 143

Query: 271 IVR--------------------------PDLISCNAMISGYTCNGKTESSLRLFRQLLA 304
           +V                            D++S NAMISGY   G+ + +L LF +++ 
Sbjct: 144 VVSYTAMITGYASRGNMDKAQKMFDEIPIKDVVSWNAMISGYAEIGRYKEALELFNEMMK 203

Query: 305 SAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEA 364
              + + ST+  ++      G++ L   IHS+    G  SN  ++ AL  +YS+  EME 
Sbjct: 204 MDVKPDESTMATVLSTCTHSGNVELGRQIHSWIDNHGFGSNLKLVNALIDLYSKCGEMER 263

Query: 365 ARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQ 424
           A  LF+    K + SWN +I GY      +EA+ +FQEM      PN VT+ SIL ACA 
Sbjct: 264 AHGLFEGLQYKDVISWNTLIGGYAYINHHKEALLVFQEMLKLGETPNDVTMLSILPACAH 323

Query: 425 LGAISLGKWVHELV--KSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWN 482
           LGAI +G+W+H  +  K +   +N  + T+LIDMYAKCGNI  A ++FD + +KS  + N
Sbjct: 324 LGAIDIGRWIHVYIDKKLKGIITNTSLQTSLIDMYAKCGNIEAANQVFDTILNKSLSSCN 383

Query: 483 TMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHD 542
            MI G+ +HG    A  L S M   GI P  +TF+ +L ACSHAGL   G +IF+SM  D
Sbjct: 384 AMIFGFAMHGRADAAFDLLSRMKKDGIEPDDITFVGLLSACSHAGLSDLGRKIFKSMTLD 443

Query: 543 HGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARV 602
           +  +P  EHY CM+D+LGR+G  ++A E I  + +EP   +WG+LL AC IHK+  L  +
Sbjct: 444 YRIEPKLEHYGCMIDLLGRSGLFKEAEELINSMTMEPDGVIWGSLLKACKIHKNLELGEL 503

Query: 603 ASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPH 662
            ++KL +++P+N G +VLLSNIY+    +   A VR ++  + L K PGC+ IE+    H
Sbjct: 504 IAQKLMKIEPKNPGSYVLLSNIYATSARWDDVARVRTLLNDKGLKKVPGCSSIEIDSMVH 563

Query: 663 VFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAI 722
            F  GD+ HPQ+  IY MLE+++  + E GF ++T   L ++EEE KE  +  HSEKLAI
Sbjct: 564 EFLIGDKFHPQNKEIYKMLEEIDSLLAETGFVSDTSEVLQEMEEELKEGALSYHSEKLAI 623

Query: 723 AFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVC 778
           AFGLI+T+PGT++RI+KNLRVC +CH ATK ISK+  R I+ RD +RFHHFK G+C
Sbjct: 624 AFGLISTKPGTKLRIVKNLRVCRNCHEATKLISKIYKREIIARDRSRFHHFKDGMC 679



 Score =  205 bits (522), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 152/577 (26%), Positives = 277/577 (48%), Gaps = 58/577 (10%)

Query: 54  FKATCYARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSF 113
           F    YA ++F SI +P+   +N +IRG + +  P S++  Y ++  +  L+P+++T+ F
Sbjct: 25  FHGLPYAISVFKSIQEPNQLSWNTMIRGHALSSDPISALNLYVYMI-SLGLSPNSYTFPF 83

Query: 114 VLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFD------ 167
           +  + +       G  +H   +  G   DL V  +L+ +Y +   V+ A KVFD      
Sbjct: 84  LFKSCAKSKAAQEGKQIHAQILKYGLTVDLHVHTSLISMYAQNGIVEDAHKVFDTSSHRD 143

Query: 168 -------------------------KMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVR 202
                                    ++P KD V WN+MISG  +   +++++ +F +M++
Sbjct: 144 VVSYTAMITGYASRGNMDKAQKMFDEIPIKDVVSWNAMISGYAEIGRYKEALELFNEMMK 203

Query: 203 NGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVE 262
                 D +++A VL        + LG +I       GF  ++ ++  L+  YSKCGE+E
Sbjct: 204 MD-VKPDESTMATVLSTCTHSGNVELGRQIHSWIDNHGFGSNLKLVNALIDLYSKCGEME 262

Query: 263 RAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFY 322
           RA  LF  +   D+IS N +I GY      + +L +F+++L   E  N  T++ ++P   
Sbjct: 263 RAHGLFEGLQYKDVISWNTLIGGYAYINHHKEALLVFQEMLKLGETPNDVTMLSILPACA 322

Query: 323 PFGHLHLTNCIHSFCLK--SGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASW 380
             G + +   IH +  K   GI++N+S+ T+L  +Y++   +EAA ++FD    KSL+S 
Sbjct: 323 HLGAIDIGRWIHVYIDKKLKGIITNTSLQTSLIDMYAKCGNIEAANQVFDTILNKSLSSC 382

Query: 381 NAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHE-LVK 439
           NAMI G+  +G  + A  L   M+   + P+ +T   +LSAC+  G   LG+ + + +  
Sbjct: 383 NAMIFGFAMHGRADAAFDLLSRMKKDGIEPDDITFVGLLSACSHAGLSDLGRKIFKSMTL 442

Query: 440 SRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSE-VTWNTMISGYGLHGHGLEAL 498
               E  +     +ID+  + G   EA EL + M+ + + V W +++    +H + LE  
Sbjct: 443 DYRIEPKLEHYGCMIDLLGRSGLFKEAEELINSMTMEPDGVIWGSLLKACKIHKN-LELG 501

Query: 499 QLFSEMLH--SGIRPSGVTFLSVLYACSHAGLVREGDEI--FQSMIHDHGFKPLAEHYAC 554
           +L ++ L       P     LS +YA S        D++   +++++D G K +    + 
Sbjct: 502 ELIAQKLMKIEPKNPGSYVLLSNIYATS-----ARWDDVARVRTLLNDKGLKKVPGCSSI 556

Query: 555 MVD------ILG-----RAGQLEKALEFIKGLAVEPG 580
            +D      ++G     +  ++ K LE I  L  E G
Sbjct: 557 EIDSMVHEFLIGDKFHPQNKEIYKMLEEIDSLLAETG 593



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 134/505 (26%), Positives = 222/505 (43%), Gaps = 87/505 (17%)

Query: 11  LFLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKL------------AHRLSDFKA-- 56
           LF S  K +K   +  Q HAQI+ +G   DL   T L            AH++ D  +  
Sbjct: 84  LFKSCAK-SKAAQEGKQIHAQILKYGLTVDLHVHTSLISMYAQNGIVEDAHKVFDTSSHR 142

Query: 57  ---------TCY--------ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLR 99
                    T Y        A+ +F  IP  D+  +N +I G++     K ++  +  + 
Sbjct: 143 DVVSYTAMITGYASRGNMDKAQKMFDEIPIKDVVSWNAMISGYAEIGRYKEALELFNEMM 202

Query: 100 KNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWV 159
           K   + PD  T + VLS  +   +  +G  +H      G+GS+L +  AL+DLY K   +
Sbjct: 203 K-MDVKPDESTMATVLSTCTHSGNVELGRQIHSWIDNHGFGSNLKLVNALIDLYSKCGEM 261

Query: 160 KSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPA 219
           + A  +F+ +  KD + WN++I G       ++++ VF +M++ G T  D T + ++LPA
Sbjct: 262 ERAHGLFEGLQYKDVISWNTLIGGYAYINHHKEALLVFQEMLKLGETPNDVT-MLSILPA 320

Query: 220 VAEVQELRLGMEIQC-LGLKL-GFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLI 277
            A +  + +G  I   +  KL G   +  + T L+  Y+KCG +E A  +F  I+   L 
Sbjct: 321 CAHLGAIDIGRWIHVYIDKKLKGIITNTSLQTSLIDMYAKCGNIEAANQVFDTILNKSLS 380

Query: 278 SCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFC 337
           SCNAMI G+  +G+ +++  L  ++       +  T VGL           L+ C H+  
Sbjct: 381 SCNAMIFGFAMHGRADAAFDLLSRMKKDGIEPDDITFVGL-----------LSACSHA-- 427

Query: 338 LKSGIVSNSSVLTALSTVYSRLNEMEAARKLF-----DESSEKSLASWNAMIAGYTQNGL 392
                         LS         +  RK+F     D   E  L  +  MI    ++GL
Sbjct: 428 -------------GLS---------DLGRKIFKSMTLDYRIEPKLEHYGCMIDLLGRSGL 465

Query: 393 TEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWV-HELVK-------SRNFE 444
            +EA  L   M    + P+ V   S+L AC     + LG+ +  +L+K       S    
Sbjct: 466 FKEAEELINSMT---MEPDGVIWGSLLKACKIHKNLELGELIAQKLMKIEPKNPGSYVLL 522

Query: 445 SNIYVSTALIDMYAKCGNIVEAREL 469
           SNIY ++A  D  A+   ++  + L
Sbjct: 523 SNIYATSARWDDVARVRTLLNDKGL 547


>gi|347954522|gb|AEP33761.1| organelle transcript processing 82, partial [Crucihimalaya
           wallichii]
          Length = 710

 Score =  468 bits (1204), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 259/695 (37%), Positives = 399/695 (57%), Gaps = 43/695 (6%)

Query: 129 LLHGHAIVSGYGSDLFVGAALVD---LYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLM 185
           ++H   I +G  +  +  + L++   L   F  +  A  VF+ + E + ++WN+M  G  
Sbjct: 20  MIHAQMIKTGLHNTNYALSKLIEFCVLSPHFDGLPYAISVFETIQEPNLLIWNTMFRGHA 79

Query: 186 KNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHV 245
            +     +++++  M+ + G   +  +   +L + A+ +  R G +I    LKLG+   +
Sbjct: 80  LSSDPVSALYLYVCMI-SLGLLPNCYTFPFLLKSCAKSKAFREGQQIHGHVLKLGYDLDL 138

Query: 246 YVLTGLVSFYSKCGEVERAELLF-----RDIVR--------------------------P 274
           YV T L+S Y + G +E A  +F     RD+V                            
Sbjct: 139 YVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIASAQKMFDEIPIK 198

Query: 275 DLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIH 334
           D++S NAMISGY   G  + +L LF++++ +  R + ST+V ++        + L   +H
Sbjct: 199 DVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQVH 258

Query: 335 SFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTE 394
           S+    G  SN  ++ AL  +Y +  E+E A  LF+  S K + SWN +I GYT   L +
Sbjct: 259 SWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGGYTHMNLYK 318

Query: 395 EAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSR-----NFESNIYV 449
           EA+ LFQEM  S  +PN VT+ SIL ACA LGAI +G+W+H  +  R     N  S+   
Sbjct: 319 EALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVANASSH--- 375

Query: 450 STALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGI 509
            T+LIDMYAKCG+I  A+++FD + ++S  +WN MI G+ +HG    A  +FS M  + I
Sbjct: 376 RTSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEI 435

Query: 510 RPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKAL 569
            P  +TF+ +L ACSH+G++  G  IF+SM  D+   P  EHY CM+D+LG +G  ++A 
Sbjct: 436 EPDDITFVGLLSACSHSGMLDLGRHIFRSMKEDYKITPKLEHYGCMIDLLGHSGLFKEAE 495

Query: 570 EFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAER 629
           E I  + +EP   +W +LL AC ++ +  L    ++ L +++P+N G +VLLSNIY+   
Sbjct: 496 EMINTMEMEPDGVIWCSLLKACKMYANVELGESYAQNLIKIEPKNPGSYVLLSNIYATAG 555

Query: 630 DYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMR 689
            + + A +R ++  + + K PGC+ IE+    H F  GD+ HP++  IY MLE++   + 
Sbjct: 556 RWNEVAKIRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLE 615

Query: 690 EAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHT 749
           EAGF  +T   L ++EEE KE  ++ HSEKLAIAFGLI+T+PGT++ I+KNLRVC +CH 
Sbjct: 616 EAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHE 675

Query: 750 ATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           ATK ISK+  R I+ RD  RFHHF+ GVCSC DYW
Sbjct: 676 ATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 710



 Score =  227 bits (579), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 164/610 (26%), Positives = 284/610 (46%), Gaps = 80/610 (13%)

Query: 13  LSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRL---SDFKATCYARALFFSIPK 69
           LSLL   KT   L   HAQ+I  G  N    ++KL         F    YA ++F +I +
Sbjct: 6   LSLLHNCKTLQSLRMIHAQMIKTGLHNTNYALSKLIEFCVLSPHFDGLPYAISVFETIQE 65

Query: 70  PDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVL 129
           P+L ++N + RG + +  P S++  Y  +  +  L P+ +T+ F+L + +       G  
Sbjct: 66  PNLLIWNTMFRGHALSSDPVSALYLYVCM-ISLGLLPNCYTFPFLLKSCAKSKAFREGQQ 124

Query: 130 LHGHAIVSGYGSDLFVGAALVDLYFKF-------------------------------SW 158
           +HGH +  GY  DL+V  +L+ +Y +                                 +
Sbjct: 125 IHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGY 184

Query: 159 VKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLP 218
           + SA+K+FD++P KD V WN+MISG  +    ++++ +F +M++      D +++ +V+ 
Sbjct: 185 IASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKT-NVRPDESTMVSVVS 243

Query: 219 AVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLIS 278
           A A+   + LG ++       GF  ++ ++  L+  Y KCGEVE A  LF  +   D+IS
Sbjct: 244 ACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVIS 303

Query: 279 CNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCL 338
            N +I GYT     + +L LF+++L S E  N  T++ ++P     G + +   IH +  
Sbjct: 304 WNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYIN 363

Query: 339 K--SGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEA 396
           K   G+ + SS  T+L  +Y++  ++EAA+++FD    +SL+SWNAMI G+  +G    A
Sbjct: 364 KRLKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAA 423

Query: 397 ISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSR-NFESNIYVSTALID 455
             +F  M+ +++ P+ +T   +LSAC+  G + LG+ +   +K        +     +ID
Sbjct: 424 FDIFSRMRKNEIEPDDITFVGLLSACSHSGMLDLGRHIFRSMKEDYKITPKLEHYGCMID 483

Query: 456 MYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVT 515
           +    G   EA E+ + M                                   + P GV 
Sbjct: 484 LLGHSGLFKEAEEMINTME----------------------------------MEPDGVI 509

Query: 516 FLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLE-----KALE 570
           + S+L AC     V  G+   Q++I      P +  Y  + +I   AG+       +AL 
Sbjct: 510 WCSLLKACKMYANVELGESYAQNLIKIEPKNPGS--YVLLSNIYATAGRWNEVAKIRALL 567

Query: 571 FIKGLAVEPG 580
             KG+   PG
Sbjct: 568 NDKGMKKVPG 577


>gi|449510623|ref|XP_004163716.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g27610-like [Cucumis sativus]
          Length = 878

 Score =  468 bits (1203), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 272/770 (35%), Positives = 419/770 (54%), Gaps = 28/770 (3%)

Query: 27  QTHAQIIIHGFQNDLSTVTKLAH---RLSDFKATCYARALFFSIPKPDLFLFNVIIRGFS 83
           Q H Q +  GF  D+S  T L     +  DF+     R +F  +   ++  +  ++ G++
Sbjct: 125 QVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFED---GRGIFDEMGIKNVVSWTSLLSGYA 181

Query: 84  NNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSI---GVLLHGHAIVSGYG 140
            N +    I     ++    + P+ FT++ VL A +   D SI   GV +H   + +G+ 
Sbjct: 182 RNGLNDEVIHLINQMQME-GVNPNGFTFATVLGALA---DESIIEGGVQVHAMIVKNGFE 237

Query: 141 SDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDM 200
              FV  AL+ +Y K   V  A  VFD M  +D+V WN MI G      + +   +F  M
Sbjct: 238 FTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFHRM 297

Query: 201 VRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGE 260
            R  G  L  T     L   ++ +EL    ++ C  +K G+     + T L+  YSKC  
Sbjct: 298 -RLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSKCSS 356

Query: 261 VERAELLFR--DIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNS---STIV 315
           V+ A  LF   D    ++++  AMI G+  N   + ++ LF Q+     R N    ST++
Sbjct: 357 VDEAFKLFSMADAAH-NVVTWTAMIGGFVQNNNNKKAVDLFCQMSREGVRPNHFTYSTVL 415

Query: 316 GLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEK 375
              P         L + +H+  +K+      SV TAL   Y +   +  + ++F     K
Sbjct: 416 AGKPS-------SLLSQLHAQIIKAYYEKVPSVATALLDAYVKTGNVVESARVFYSIPAK 468

Query: 376 SLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGA-ISLGKWV 434
            + +W+AM+ G  Q   +E+A+ +F ++    V PN  T SS+++AC+   A +  GK +
Sbjct: 469 DIVAWSAMLTGLAQTRDSEKAMEVFIQLVKEGVKPNEYTFSSVINACSSSAATVEHGKQI 528

Query: 435 HELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHG 494
           H         + + VS+AL+ MY+K GNI  A ++F     +  V+WN+MI+GYG HG  
Sbjct: 529 HATAVKSGKSNALCVSSALLTMYSKKGNIESAEKVFTRQEERDIVSWNSMITGYGQHGDA 588

Query: 495 LEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYAC 554
            +AL++F  M + G+    VTF+ VL AC+HAGLV EG++ F  MI D+      EHY+C
Sbjct: 589 KKALEVFQIMQNQGLPLDDVTFIGVLTACTHAGLVEEGEKYFNIMIKDYHIDKKXEHYSC 648

Query: 555 MVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPEN 614
           MVD+  RAG  +KA++ I G+     P +W  LL AC +H++  L ++A+EKL  L P +
Sbjct: 649 MVDLYSRAGMFDKAMDIINGMPFPASPTIWRTLLAACRVHRNLELGKLAAEKLVSLQPND 708

Query: 615 VGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQS 674
              +VLLSNI++   ++ + A VR+++ +RK+ K  GC+ IE+      F +GD  HP S
Sbjct: 709 AVGYVLLSNIHAVAGNWEEKAHVRKLMDERKVKKEAGCSWIEIKNRIFSFLAGDVSHPFS 768

Query: 675 TAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTE 734
             +YA LE+L+ K+++ G+Q +T    HDVEEE KE ++  HSE+LAIA+GLIA  PG  
Sbjct: 769 DLVYAKLEELSIKLKDMGYQPDTNYVFHDVEEEHKEAILSQHSERLAIAYGLIALPPGAP 828

Query: 735 IRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           I+I KNLR+C DCH   + IS +  R ++VRD+NRFHHFKGGVCSCG YW
Sbjct: 829 IQIEKNLRICGDCHNVIELISLIEERTLIVRDSNRFHHFKGGVCSCGGYW 878



 Score =  206 bits (523), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 147/544 (27%), Positives = 259/544 (47%), Gaps = 10/544 (1%)

Query: 59  YARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAA 118
           YA  LF   P  D+  +N ++  FS N   + ++  +  L  ++ L  D  T S  L   
Sbjct: 56  YAHQLFDETPLKDISHYNRLLFDFSRNNHDREALHLFKDLH-SSGLGVDGLTLSCALKVC 114

Query: 119 SACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWN 178
               D+ +G  +H  ++ SG+  D+ VG +LVD+Y K    +  R +FD+M  K+ V W 
Sbjct: 115 GVLFDQVVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWT 174

Query: 179 SMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLK 238
           S++SG  +N    + I +   M +  G   +  + A VL A+A+   +  G+++  + +K
Sbjct: 175 SLLSGYARNGLNDEVIHLINQM-QMEGVNPNGFTFATVLGALADESIIEGGVQVHAMIVK 233

Query: 239 LGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRL 298
            GF    +V   L+  Y K   V  AE +F  +V  D ++ N MI GY   G      ++
Sbjct: 234 NGFEFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQM 293

Query: 299 FRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSR 358
           F ++  +  +++ +     + +      L+ T  +H   +K+G      + TAL   YS+
Sbjct: 294 FHRMRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSK 353

Query: 359 LNEMEAARKLFD-ESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSS 417
            + ++ A KLF    +  ++ +W AMI G+ QN   ++A+ LF +M    V PN  T S+
Sbjct: 354 CSSVDEAFKLFSMADAAHNVVTWTAMIGGFVQNNNNKKAVDLFCQMSREGVRPNHFTYST 413

Query: 418 ILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKS 477
           +L+        SL   +H  +    +E    V+TAL+D Y K GN+VE+  +F  +  K 
Sbjct: 414 VLAGKPS----SLLSQLHAQIIKAYYEKVPSVATALLDAYVKTGNVVESARVFYSIPAKD 469

Query: 478 EVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYAC-SHAGLVREGDEIF 536
            V W+ M++G        +A+++F +++  G++P+  TF SV+ AC S A  V  G +I 
Sbjct: 470 IVAWSAMLTGLAQTRDSEKAMEVFIQLVKEGVKPNEYTFSSVINACSSSAATVEHGKQIH 529

Query: 537 QSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKD 596
            + +       L    A ++ +  + G +E A E +     E     W +++     H D
Sbjct: 530 ATAVKSGKSNALCVSSA-LLTMYSKKGNIESA-EKVFTRQEERDIVSWNSMITGYGQHGD 587

Query: 597 TNLA 600
              A
Sbjct: 588 AKKA 591



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 63/220 (28%), Positives = 111/220 (50%), Gaps = 3/220 (1%)

Query: 1   MSMKTPQSRNLFLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYA 60
           MS +  +  +   S +   K  S L+Q HAQII   ++   S  T L            +
Sbjct: 399 MSREGVRPNHFTYSTVLAGKPSSLLSQLHAQIIKAYYEKVPSVATALLDAYVKTGNVVES 458

Query: 61  RALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSA-AS 119
             +F+SIP  D+  ++ ++ G +     + ++  +  L K   + P+ +T+S V++A +S
Sbjct: 459 ARVFYSIPAKDIVAWSAMLTGLAQTRDSEKAMEVFIQLVKE-GVKPNEYTFSSVINACSS 517

Query: 120 ACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNS 179
           +      G  +H  A+ SG  + L V +AL+ +Y K   ++SA KVF +  E+D V WNS
Sbjct: 518 SAATVEHGKQIHATAVKSGKSNALCVSSALLTMYSKKGNIESAEKVFTRQEERDIVSWNS 577

Query: 180 MISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPA 219
           MI+G  ++   + ++ VF  +++N G  LD  +   VL A
Sbjct: 578 MITGYGQHGDAKKALEVF-QIMQNQGLPLDDVTFIGVLTA 616


>gi|52076596|dbj|BAD45498.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|218187337|gb|EEC69764.1| hypothetical protein OsI_00012 [Oryza sativa Indica Group]
          Length = 810

 Score =  468 bits (1203), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 263/755 (34%), Positives = 405/755 (53%), Gaps = 36/755 (4%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNN-EMPKSSICFYTHLRKNT---------------- 102
           ARA+F  +P  ++F  N+I+  +S++ ++P +   F +   +N                 
Sbjct: 62  ARAMFDQMPHKNIFSLNLILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRT 121

Query: 103 -------------ALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAAL 149
                         + PD  T + VL+    C   S    LH  AI  G  + +FV   L
Sbjct: 122 SDALSLFRAMLGEGVIPDRVTVTTVLNLP-GCTVPS----LHPFAIKFGLDTHVFVCNTL 176

Query: 150 VDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLD 209
           +D Y K   + +AR+VF +M +KD V +N+M+ G  K      ++ +F  M R  G    
Sbjct: 177 LDAYCKHGLLAAARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAM-RRAGIPAT 235

Query: 210 STSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFR 269
             + +++L   A +  L LG ++  L L+     +V+V   L+ FYSKC  ++    LF 
Sbjct: 236 HFTFSSILTVAAGMAHLLLGHQVHALVLRSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFD 295

Query: 270 DIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHL 329
           ++   D +S N +I+ Y  N    + LRLFR++              ++ V      +H+
Sbjct: 296 EMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVHI 355

Query: 330 TNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQ 389
              IH+  +  G+ S   +  AL  +YS+   ++AA+  F   SEKS  SW A+I GY Q
Sbjct: 356 GKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQ 415

Query: 390 NGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYV 449
           NG  EEA+ LF +M+ + + P+  T SSI+ A + L  I LG+ +H  +    ++S+++ 
Sbjct: 416 NGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFS 475

Query: 450 STALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGI 509
            + L+DMYAKCG + EA   FD M  ++ ++WN +IS Y  +G    A+++F  MLH G 
Sbjct: 476 GSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISAYAHYGEAKNAIKMFEGMLHCGF 535

Query: 510 RPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKAL 569
            P  VTFLSVL ACSH GL  E  + F  M H +   P  EHYAC++D LGR G   +  
Sbjct: 536 NPDSVTFLSVLAACSHNGLADECMKYFHLMKHQYSISPWKEHYACVIDTLGRVGCFSQVQ 595

Query: 570 EFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAER 629
           + +  +  +  P +W ++L +C IH +  LARVA++KLF ++P +   +V+LSNIY+   
Sbjct: 596 KMLVEMPFKADPIIWTSILHSCRIHGNQELARVAADKLFGMEPTDATPYVILSNIYARAG 655

Query: 630 DYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMR 689
            +  AA V+++++ R + K  G + +E+    + F S D   P    I   L++L  +M 
Sbjct: 656 QWEDAACVKKIMRDRGVRKESGYSWVEIKQKIYSFASNDLTSPMIDEIKDELDRLYKEMD 715

Query: 690 EAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHT 749
           + G++ +   ALH V+ E K   +K HSE+LAIAF L+ T  GT IRI+KNL  CLDCH 
Sbjct: 716 KQGYKPDITCALHMVDHELKLESLKYHSERLAIAFALMNTPAGTPIRIMKNLTACLDCHA 775

Query: 750 ATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
             K ISK+  R I+VRD+ RFHHFK GVCSCGDYW
Sbjct: 776 VIKMISKIVNRDIIVRDSRRFHHFKDGVCSCGDYW 810



 Score = 92.8 bits (229), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 61/196 (31%), Positives = 99/196 (50%), Gaps = 9/196 (4%)

Query: 325 GHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMI 384
           GHLH    +        I S + +L+A    YS   ++ AA+ LF  S  ++  +W  M+
Sbjct: 57  GHLHRARAMFDQMPHKNIFSLNLILSA----YSSSGDLPAAQHLFLSSPHRNATTWTIMM 112

Query: 385 AGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFE 444
             +   G T +A+SLF+ M    V P+ VTV+++L+    L   ++   +H        +
Sbjct: 113 RAHAAAGRTSDALSLFRAMLGEGVIPDRVTVTTVLN----LPGCTVPS-LHPFAIKFGLD 167

Query: 445 SNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEM 504
           ++++V   L+D Y K G +  AR +F  M  K  VT+N M+ G    G   +ALQLF+ M
Sbjct: 168 THVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAM 227

Query: 505 LHSGIRPSGVTFLSVL 520
             +GI  +  TF S+L
Sbjct: 228 RRAGIPATHFTFSSIL 243


>gi|414588833|tpg|DAA39404.1| TPA: hypothetical protein ZEAMMB73_882385 [Zea mays]
          Length = 668

 Score =  467 bits (1202), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 241/563 (42%), Positives = 353/563 (62%), Gaps = 8/563 (1%)

Query: 229 GMEIQCLGLKLG-FHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYT 287
           G ++  L L+ G F    Y  + L+  Y  C     A   F +I  P+ +   AM SG  
Sbjct: 107 GRQLHLLALRSGLFPSDAYCASALLHMYHHCFRPLDARRAFDEIPTPNPVIVTAMASGCM 166

Query: 288 CNGKTESSLRLFRQLLAS--AERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSN 345
            N    ++L +FR ++AS  A  V+ +  +  +          +T  IH+   K G+   
Sbjct: 167 RNNLVYTTLSIFRSMVASGSAGVVDEAAALVALSASARVPDRGITGGIHALVSKIGLDGQ 226

Query: 346 SSVLTALSTVYSRL--NEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEM 403
           + V   +   Y++   +++ AARKLFD   ++ + SWN MIA Y QNGL+ EA+ L+ +M
Sbjct: 227 TGVANTIIDAYAKGGGHDLGAARKLFD-MMDRDVVSWNTMIALYAQNGLSTEALGLYSKM 285

Query: 404 --QASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCG 461
                 V  N VT+S++L ACA  GAI  GK +H  V     E N+YV T+++DMY+KCG
Sbjct: 286 LIVGGDVRCNAVTLSAVLLACAHAGAIQTGKRIHNQVVRMGLEDNVYVGTSVVDMYSKCG 345

Query: 462 NIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLY 521
            +  A + F  +  K+ ++W+ MI+GYG+HG+G EAL +F++M  SG++P+ +TF++VL 
Sbjct: 346 KVEMAWKAFQKIKGKNILSWSAMIAGYGMHGYGQEALHVFTDMRKSGLKPNYITFITVLA 405

Query: 522 ACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGP 581
           ACSHAGL+ EG   + +M  + G +P  EHY CMVD+LGRAG L++A   IK + V+P  
Sbjct: 406 ACSHAGLLSEGRYWYNTMKTEFGIEPGVEHYGCMVDLLGRAGCLDEAYGLIKEMKVKPDA 465

Query: 582 AVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVV 641
           A+WGALL AC I+K+  LA++ +E+LFELD  N GY+VLLSNIY+    + +   +R +V
Sbjct: 466 ALWGALLSACRIYKNVELAKICAERLFELDATNSGYYVLLSNIYAEAGMWKEVERMRVLV 525

Query: 642 KKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTAL 701
           K R + K PG + +E+ G  H+F  GD+ HPQ   IYA LEKL  ++ +AG+   T + L
Sbjct: 526 KTRGIEKPPGYSSVELKGKTHLFYVGDKSHPQYKEIYAYLEKLLERIHDAGYVPNTGSVL 585

Query: 702 HDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRV 761
           HD++ EE+E M+++HSEKLA+AF L+ +  G+ I +IKNLRVC DCH A K I+K+TGR 
Sbjct: 586 HDLDVEERESMLRIHSEKLAVAFALMNSVQGSVIHVIKNLRVCTDCHAAIKIITKLTGRE 645

Query: 762 IVVRDANRFHHFKGGVCSCGDYW 784
           I++RD  RFHHFK G+CSCGDYW
Sbjct: 646 IIIRDLKRFHHFKDGLCSCGDYW 668



 Score =  143 bits (360), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 105/368 (28%), Positives = 188/368 (51%), Gaps = 9/368 (2%)

Query: 127 GVLLHGHAIVSG-YGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLM 185
           G  LH  A+ SG + SD +  +AL+ +Y        AR+ FD++P  + V+  +M SG M
Sbjct: 107 GRQLHLLALRSGLFPSDAYCASALLHMYHHCFRPLDARRAFDEIPTPNPVIVTAMASGCM 166

Query: 186 KNCCFQDSIWVFGDMVRNGGTW-LDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDH 244
           +N     ++ +F  MV +G    +D  +    L A A V +  +   I  L  K+G    
Sbjct: 167 RNNLVYTTLSIFRSMVASGSAGVVDEAAALVALSASARVPDRGITGGIHALVSKIGLDGQ 226

Query: 245 VYVLTGLVSFYSKCG--EVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQL 302
             V   ++  Y+K G  ++  A  LF D++  D++S N MI+ Y  NG +  +L L+ ++
Sbjct: 227 TGVANTIIDAYAKGGGHDLGAARKLF-DMMDRDVVSWNTMIALYAQNGLSTEALGLYSKM 285

Query: 303 L--ASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLN 360
           L      R N+ T+  ++      G +     IH+  ++ G+  N  V T++  +YS+  
Sbjct: 286 LIVGGDVRCNAVTLSAVLLACAHAGAIQTGKRIHNQVVRMGLEDNVYVGTSVVDMYSKCG 345

Query: 361 EMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILS 420
           ++E A K F +   K++ SW+AMIAGY  +G  +EA+ +F +M+ S + PN +T  ++L+
Sbjct: 346 KVEMAWKAFQKIKGKNILSWSAMIAGYGMHGYGQEALHVFTDMRKSGLKPNYITFITVLA 405

Query: 421 ACAQLGAISLGKWVHELVKSR-NFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEV 479
           AC+  G +S G++ +  +K+    E  +     ++D+  + G + EA  L   M  K + 
Sbjct: 406 ACSHAGLLSEGRYWYNTMKTEFGIEPGVEHYGCMVDLLGRAGCLDEAYGLIKEMKVKPDA 465

Query: 480 T-WNTMIS 486
             W  ++S
Sbjct: 466 ALWGALLS 473



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 118/442 (26%), Positives = 196/442 (44%), Gaps = 49/442 (11%)

Query: 37  FQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSIC-FY 95
           F +D    + L H          AR  F  IP P+  +   +  G   N +  +++  F 
Sbjct: 120 FPSDAYCASALLHMYHHCFRPLDARRAFDEIPTPNPVIVTAMASGCMRNNLVYTTLSIFR 179

Query: 96  THLRKNTALTPDNFTYSFVLSAASACCDRSI--GVLLHGHAIVSGYGSDLFVGAA--LVD 151
           + +   +A   D       LSA++   DR I  G+    HA+VS  G D   G A  ++D
Sbjct: 180 SMVASGSAGVVDEAAALVALSASARVPDRGITGGI----HALVSKIGLDGQTGVANTIID 235

Query: 152 LYFKFSW--VKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGG-TWL 208
            Y K     + +ARK+FD M ++D V WN+MI+   +N    +++ ++  M+  GG    
Sbjct: 236 AYAKGGGHDLGAARKLFDMM-DRDVVSWNTMIALYAQNGLSTEALGLYSKMLIVGGDVRC 294

Query: 209 DSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLF 268
           ++ +++AVL A A    ++ G  I    +++G  D+VYV T +V  YSKCG+VE A   F
Sbjct: 295 NAVTLSAVLLACAHAGAIQTGKRIHNQVVRMGLEDNVYVGTSVVDMYSKCGKVEMAWKAF 354

Query: 269 RDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLH 328
           + I   +++S +AMI+GY  +G  + +L +F  +  S  + N  T + +           
Sbjct: 355 QKIKGKNILSWSAMIAGYGMHGYGQEALHVFTDMRKSGLKPNYITFITV----------- 403

Query: 329 LTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYT 388
           L  C H+  L  G    +++ T                       E  +  +  M+    
Sbjct: 404 LAACSHAGLLSEGRYWYNTMKTEFGI-------------------EPGVEHYGCMVDLLG 444

Query: 389 QNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHE-LVKSRNFESNI 447
           + G  +EA  L +EM   KV P+     ++LSAC     + L K   E L +     S  
Sbjct: 445 RAGCLDEAYGLIKEM---KVKPDAALWGALLSACRIYKNVELAKICAERLFELDATNSGY 501

Query: 448 YVSTALIDMYAKCGNIVEAREL 469
           YV   L ++YA+ G   E   +
Sbjct: 502 YV--LLSNIYAEAGMWKEVERM 521


>gi|188509949|gb|ACD56635.1| putative pentatricopeptide repeat protein [Gossypium raimondii]
          Length = 667

 Score =  467 bits (1202), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 239/626 (38%), Positives = 368/626 (58%), Gaps = 23/626 (3%)

Query: 160 KSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPA 219
           +SA ++FDK+ ++D + WNSMISG + N   +  + ++  M+  G   +D  ++ +VL  
Sbjct: 64  ESASELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGID-VDLATIISVLVG 122

Query: 220 VAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISC 279
            A+   L LG  +  L +K  F   +     L+  YSKCG+++ A  +F  +   +++S 
Sbjct: 123 CAKSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSW 182

Query: 280 NAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLK 339
            +MI+GYT +G ++ ++ L +Q+     +++   I  ++      G L     +H +   
Sbjct: 183 TSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKA 242

Query: 340 SGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISL 399
           + + SN  V  AL  +Y++   ME A  +F     K + SWN M+               
Sbjct: 243 NNMASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMVG-------------- 288

Query: 400 FQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAK 459
                  ++ P+  T++ IL ACA L A+  GK +H  +    + S+ +V+ AL+D+Y K
Sbjct: 289 -------ELKPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVK 341

Query: 460 CGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSV 519
           CG +  AR LFD++  K  V+W  MI+GYG+HG+G EA+  F+EM  +GI P  V+F+S+
Sbjct: 342 CGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISI 401

Query: 520 LYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEP 579
           LYACSH+GL+ +G   F  M +D   +P  EHYACMVD+L R G L KA +FI+ L + P
Sbjct: 402 LYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAP 461

Query: 580 GPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQ 639
              +WGALL  C I+ D  LA   +E++FEL+PEN GY+VLL+NIY+    + +   +R+
Sbjct: 462 DATIWGALLCGCRIYHDIELAEKVAERVFELEPENTGYYVLLANIYAEAEKWEEVKRMRE 521

Query: 640 VVKKRKLAKAPGCTLIEVGGTPHVFTSGDQ-LHPQSTAIYAMLEKLNGKMREAGFQTETV 698
            + K+ L K PGC+ IE+ G  ++F SG+   HP S  I ++L+K+  KM+E G+  +T 
Sbjct: 522 KIGKKGLRKNPGCSWIEIKGRVNLFVSGNNSSHPHSKKIESLLKKMRRKMKEEGYFPKTK 581

Query: 699 TALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVT 758
            AL + +E +KE+ +  HSEKLA+AFGL+   P   IR+ KNLRVC DCH   KF+SK T
Sbjct: 582 YALINADEMQKEMALCGHSEKLAMAFGLLTLPPRKTIRVTKNLRVCGDCHEMAKFMSKET 641

Query: 759 GRVIVVRDANRFHHFKGGVCSCGDYW 784
            R IV+RD+NRFHHFK G CSC  +W
Sbjct: 642 RREIVLRDSNRFHHFKDGYCSCRGFW 667



 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 128/507 (25%), Positives = 228/507 (44%), Gaps = 35/507 (6%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           A  LF  +   D+  +N +I G+ +N + +  +  Y  +     +  D  T   VL   +
Sbjct: 66  ASELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMY-LGIDVDLATIISVLVGCA 124

Query: 120 ACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNS 179
                S+G  +H  AI S +   +     L+D+Y K   +  A +VF+KM E++ V W S
Sbjct: 125 KSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTS 184

Query: 180 MISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKL 239
           MI+G  ++     +I +   M +  G  LD  ++ ++L A A    L  G ++       
Sbjct: 185 MIAGYTRDGWSDGAIILLQQMEKE-GVKLDVVAITSILHACARSGSLDNGKDVHDYIKAN 243

Query: 240 GFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLF 299
               +++V   L+  Y+KCG +E A  +F  +V  D+IS N M+                
Sbjct: 244 NMASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMVGEL------------- 290

Query: 300 RQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRL 359
                   + +S T+  ++P       L     IH + L++G  S+  V  AL  +Y + 
Sbjct: 291 --------KPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKC 342

Query: 360 NEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSIL 419
             +  AR LFD    K L SW  MIAGY  +G   EAI+ F EM+ + + P+ V+  SIL
Sbjct: 343 GVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISIL 402

Query: 420 SACAQLGAISLG-KWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSE 478
            AC+  G +  G ++ + +    N E  +     ++D+ ++ GN+ +A +  + +    +
Sbjct: 403 YACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAPD 462

Query: 479 VT-WNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGD--EI 535
            T W  ++ G  ++ H +E  +  +E +   + P    +  +L     A +  E +  E 
Sbjct: 463 ATIWGALLCGCRIY-HDIELAEKVAERVFE-LEPENTGYYVLL-----ANIYAEAEKWEE 515

Query: 536 FQSMIHDHGFKPLAEHYAC-MVDILGR 561
            + M    G K L ++  C  ++I GR
Sbjct: 516 VKRMREKIGKKGLRKNPGCSWIEIKGR 542



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 45/193 (23%), Positives = 86/193 (44%), Gaps = 26/193 (13%)

Query: 418 ILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVE------------ 465
           ++S  A  G +  G+ V + ++ +N    +Y+   ++  YAK G+  E            
Sbjct: 2   LVSFYATCGDLKEGRRVFDTMEKKN----VYLWNFMVSEYAKIGDFKESICLFKIMVEKG 57

Query: 466 --------ARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFL 517
                   A ELFD +  +  ++WN+MISGY  +G     L ++ +M++ GI     T +
Sbjct: 58  IEGKRSESASELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATII 117

Query: 518 SVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAV 577
           SVL  C+ +G +  G  +  S+     F+        ++D+  + G L+ AL   + +  
Sbjct: 118 SVLVGCAKSGTLSLGKAV-HSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMG- 175

Query: 578 EPGPAVWGALLGA 590
           E     W +++  
Sbjct: 176 ERNVVSWTSMIAG 188


>gi|357470275|ref|XP_003605422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355506477|gb|AES87619.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 839

 Score =  467 bits (1201), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 261/723 (36%), Positives = 408/723 (56%), Gaps = 7/723 (0%)

Query: 69  KPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGV 128
           K D+  ++ II  F+NN     ++  +  L     + P+ + ++ V+ A         G+
Sbjct: 117 KRDVVSYSSIISCFANNRNCLKAVEMFDQLLLQDGVYPNEYCFTAVIRACLKGGFFKTGL 176

Query: 129 LLHGHAIVSGY-GSDLFVGAALVDLYFK---FSWVKSARKVFDKMPEKDTVLWNSMISGL 184
            L G  + +GY  S + VG  L+D++ K    + ++SARKVFDKM EK+ V W  MI+ L
Sbjct: 177 CLFGFVLKTGYFDSHVCVGCELIDMFVKGCSLADLESARKVFDKMREKNVVTWTLMITRL 236

Query: 185 MKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDH 244
            +     ++I +F +M+ + G   D  ++  ++   AE+Q L LG E+    ++ G    
Sbjct: 237 AQYGYNDEAIDLFLEMLVSSGYVPDRFTLTGLISVCAEIQFLSLGKELHSWVIRSGLVLD 296

Query: 245 VYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYT--CNGKTESSLRLF-RQ 301
           + V   LV  Y+KCG V+ A  +F  +   +++S  A+++GY     G    ++R+F   
Sbjct: 297 LCVGCSLVDMYAKCGLVQEARKVFDGMREHNVMSWTALVNGYVRGGGGYEREAMRMFSNM 356

Query: 302 LLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNE 361
           LL      N  T  G++              +H   +K G+ +   V   L +VY++   
Sbjct: 357 LLQGGVAPNCFTFSGVLKACASLPDFDFGEQVHGQTIKLGLSAIDCVGNGLVSVYAKSGR 416

Query: 362 MEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSA 421
           ME+ARK FD   EK+L S   +     ++        L +E++      +  T +S+LS 
Sbjct: 417 MESARKCFDVLFEKNLVSETVVDDTNVKDFNLNSEQDLDREVEYVGSGVSSFTYASLLSG 476

Query: 422 CAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTW 481
            A +G I  G+ +H +V    F +++ V+ ALI MY+KCGN   A ++F+ M   + +TW
Sbjct: 477 AACIGTIGKGEQIHAMVVKIGFRTDLSVNNALISMYSKCGNKEAALQVFNDMEDCNVITW 536

Query: 482 NTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIH 541
            ++I+G+  HG   +AL+LF  ML +G++P+ VT+++VL ACSH GL+ E  + F SM  
Sbjct: 537 TSIINGFAKHGFASKALELFYNMLETGVKPNDVTYIAVLSACSHVGLIDEAWKHFTSMRD 596

Query: 542 DHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLAR 601
           +HG  P  EHYACMVD+LGR+G L +A+EFI  +  +    VW   LG+C +H++T L  
Sbjct: 597 NHGIVPRMEHYACMVDLLGRSGLLSEAIEFINSMPFDADALVWRTFLGSCRVHRNTKLGE 656

Query: 602 VASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTP 661
            A++ + E +P +   ++LLSN+Y+ E  +   A +R+ +K++++ K  G + IEV    
Sbjct: 657 HAAKMILEREPHDPATYILLSNLYATEGRWEDVAAIRKNMKQKQITKEAGSSWIEVENQV 716

Query: 662 HVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLA 721
           H F  GD LHP++  IY  L++L  K++  G+   T   LHDVE+E+KE  +  HSEKLA
Sbjct: 717 HKFHVGDTLHPKAQQIYEKLDELALKIKNVGYVPNTDFVLHDVEDEQKEQYLFQHSEKLA 776

Query: 722 IAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCG 781
           +AF LI+T     IR+ KNLRVC DCHTA K+IS V+GR IVVRDANRFHH K G CSC 
Sbjct: 777 VAFALISTPNPKPIRVFKNLRVCGDCHTAIKYISMVSGREIVVRDANRFHHMKDGTCSCN 836

Query: 782 DYW 784
           DYW
Sbjct: 837 DYW 839



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 123/471 (26%), Positives = 225/471 (47%), Gaps = 11/471 (2%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           AR +F  + + ++  + ++I   +       +I  +  +  ++   PD FT + ++S  +
Sbjct: 214 ARKVFDKMREKNVVTWTLMITRLAQYGYNDEAIDLFLEMLVSSGYVPDRFTLTGLISVCA 273

Query: 120 ACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNS 179
                S+G  LH   I SG   DL VG +LVD+Y K   V+ ARKVFD M E + + W +
Sbjct: 274 EIQFLSLGKELHSWVIRSGLVLDLCVGCSLVDMYAKCGLVQEARKVFDGMREHNVMSWTA 333

Query: 180 MISGLMK--NCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGL 237
           +++G ++      ++++ +F +M+  GG   +  + + VL A A + +   G ++    +
Sbjct: 334 LVNGYVRGGGGYEREAMRMFSNMLLQGGVAPNCFTFSGVLKACASLPDFDFGEQVHGQTI 393

Query: 238 KLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLR 297
           KLG      V  GLVS Y+K G +E A   F  +   +L+S   +      +    S   
Sbjct: 394 KLGLSAIDCVGNGLVSVYAKSGRMESARKCFDVLFEKNLVSETVVDDTNVKDFNLNSEQD 453

Query: 298 LFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYS 357
           L R++      V+S T   L+      G +     IH+  +K G  ++ SV  AL ++YS
Sbjct: 454 LDREVEYVGSGVSSFTYASLLSGAACIGTIGKGEQIHAMVVKIGFRTDLSVNNALISMYS 513

Query: 358 RLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSS 417
           +    EAA ++F++  + ++ +W ++I G+ ++G   +A+ LF  M  + V PN VT  +
Sbjct: 514 KCGNKEAALQVFNDMEDCNVITWTSIINGFAKHGFASKALELFYNMLETGVKPNDVTYIA 573

Query: 418 ILSACAQLGAISLGKWVH--ELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSH 475
           +LSAC+ +G I    W H   +  +      +     ++D+  + G + EA E  + M  
Sbjct: 574 VLSACSHVGLIDEA-WKHFTSMRDNHGIVPRMEHYACMVDLLGRSGLLSEAIEFINSMPF 632

Query: 476 KSE-VTWNTMISGYGLHGH---GLEALQLFSEMLHSGIRPSGVTFLSVLYA 522
            ++ + W T +    +H +   G  A ++  E       P+    LS LYA
Sbjct: 633 DADALVWRTFLGSCRVHRNTKLGEHAAKMILE--REPHDPATYILLSNLYA 681



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 75/272 (27%), Positives = 134/272 (49%), Gaps = 12/272 (4%)

Query: 328 HLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFD--ESSEKSLASWNAMIA 385
           HL   +H     S +  ++ +L +L T+YS+ N+   A  +F   E+S++ + S++++I+
Sbjct: 69  HLGKLLHHKLTTSNLPLDTLLLNSLITLYSKSNDPITAFSIFQSMENSKRDVVSYSSIIS 128

Query: 386 GYTQNGLTEEAISLF-QEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELV-KSRNF 443
            +  N    +A+ +F Q +    V PN    ++++ AC + G    G  +   V K+  F
Sbjct: 129 CFANNRNCLKAVEMFDQLLLQDGVYPNEYCFTAVIRACLKGGFFKTGLCLFGFVLKTGYF 188

Query: 444 ESNIYVSTALIDMYAK---CGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQL 500
           +S++ V   LIDM+ K     ++  AR++FD M  K+ VTW  MI+    +G+  EA+ L
Sbjct: 189 DSHVCVGCELIDMFVKGCSLADLESARKVFDKMREKNVVTWTLMITRLAQYGYNDEAIDL 248

Query: 501 FSEML-HSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYAC-MVDI 558
           F EML  SG  P   T   ++  C+    +  G E+   +I       L     C +VD+
Sbjct: 249 FLEMLVSSGYVPDRFTLTGLISVCAEIQFLSLGKELHSWVIRSGLVLDLC--VGCSLVDM 306

Query: 559 LGRAGQLEKALEFIKGLAVEPGPAVWGALLGA 590
             + G +++A +   G+  E     W AL+  
Sbjct: 307 YAKCGLVQEARKVFDGMR-EHNVMSWTALVNG 337



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/123 (26%), Positives = 66/123 (53%), Gaps = 3/123 (2%)

Query: 413 VTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDL 472
           +T S +L  C +     LGK +H  + + N   +  +  +LI +Y+K  + + A  +F  
Sbjct: 53  ITSSLLLKQCIRTKNTHLGKLLHHKLTTSNLPLDTLLLNSLITLYSKSNDPITAFSIFQS 112

Query: 473 M--SHKSEVTWNTMISGYGLHGHGLEALQLFSE-MLHSGIRPSGVTFLSVLYACSHAGLV 529
           M  S +  V+++++IS +  + + L+A+++F + +L  G+ P+   F +V+ AC   G  
Sbjct: 113 MENSKRDVVSYSSIISCFANNRNCLKAVEMFDQLLLQDGVYPNEYCFTAVIRACLKGGFF 172

Query: 530 REG 532
           + G
Sbjct: 173 KTG 175



 Score = 41.6 bits (96), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 47/180 (26%), Positives = 77/180 (42%), Gaps = 16/180 (8%)

Query: 12  FLSLLKGAK---TQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIP 68
           + SLL GA    T  +  Q HA ++  GF+ DLS    L    S       A  +F  + 
Sbjct: 470 YASLLSGAACIGTIGKGEQIHAMVVKIGFRTDLSVNNALISMYSKCGNKEAALQVFNDME 529

Query: 69  KPDLFLFNVIIRGFSNNEMPKSSI-CFYTHLRKNTALTPDNFTYSFVLSAAS--ACCD-- 123
             ++  +  II GF+ +     ++  FY  L   T + P++ TY  VLSA S     D  
Sbjct: 530 DCNVITWTSIINGFAKHGFASKALELFYNMLE--TGVKPNDVTYIAVLSACSHVGLIDEA 587

Query: 124 -RSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMP-EKDTVLWNSMI 181
            +    +   H IV      +   A +VDL  +   +  A +  + MP + D ++W + +
Sbjct: 588 WKHFTSMRDNHGIV----PRMEHYACMVDLLGRSGLLSEAIEFINSMPFDADALVWRTFL 643


>gi|15128441|dbj|BAB62625.1| P0402A09.8 [Oryza sativa Japonica Group]
 gi|20804430|dbj|BAB92127.1| P0455C04.2 [Oryza sativa Japonica Group]
          Length = 1122

 Score =  467 bits (1201), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 263/755 (34%), Positives = 405/755 (53%), Gaps = 36/755 (4%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNN-EMPKSSICFYTHLRKNT---------------- 102
           ARA+F  +P  ++F  N+I+  +S++ ++P +   F +   +N                 
Sbjct: 62  ARAMFDQMPHKNIFSLNLILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRT 121

Query: 103 -------------ALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAAL 149
                         + PD  T + VL+    C   S    LH  AI  G  + +FV   L
Sbjct: 122 SDALSLFRAMLGEGVIPDRVTVTTVLNL-PGCTVPS----LHPFAIKFGLDTHVFVCNTL 176

Query: 150 VDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLD 209
           +D Y K   + +AR+VF +M +KD V +N+M+ G  K      ++ +F  M R  G    
Sbjct: 177 LDAYCKHGLLAAARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAM-RRAGIPAT 235

Query: 210 STSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFR 269
             + +++L   A +  L LG ++  L L+     +V+V   L+ FYSKC  ++    LF 
Sbjct: 236 HFTFSSILTVAAGMAHLLLGHQVHALVLRSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFD 295

Query: 270 DIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHL 329
           ++   D +S N +I+ Y  N    + LRLFR++              ++ V      +H+
Sbjct: 296 EMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVHI 355

Query: 330 TNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQ 389
              IH+  +  G+ S   +  AL  +YS+   ++AA+  F   SEKS  SW A+I GY Q
Sbjct: 356 GKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQ 415

Query: 390 NGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYV 449
           NG  EEA+ LF +M+ + + P+  T SSI+ A + L  I LG+ +H  +    ++S+++ 
Sbjct: 416 NGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFS 475

Query: 450 STALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGI 509
            + L+DMYAKCG + EA   FD M  ++ ++WN +IS Y  +G    A+++F  MLH G 
Sbjct: 476 GSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISAYAHYGEAKNAIKMFEGMLHCGF 535

Query: 510 RPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKAL 569
            P  VTFLSVL ACSH GL  E  + F  M H +   P  EHYAC++D LGR G   +  
Sbjct: 536 NPDSVTFLSVLAACSHNGLADECMKYFHLMKHQYSISPWKEHYACVIDTLGRVGCFSQVQ 595

Query: 570 EFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAER 629
           + +  +  +  P +W ++L +C IH +  LARVA++KLF ++P +   +V+LSNIY+   
Sbjct: 596 KMLVEMPFKADPIIWTSILHSCRIHGNQELARVAADKLFGMEPTDATPYVILSNIYARAG 655

Query: 630 DYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMR 689
            +  AA V+++++ R + K  G + +E+    + F S D   P    I   L++L  +M 
Sbjct: 656 QWEDAACVKKIMRDRGVRKESGYSWVEIKQKIYSFASNDLTSPMIDEIKDELDRLYKEMD 715

Query: 690 EAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHT 749
           + G++ +   ALH V+ E K   +K HSE+LAIAF L+ T  GT IRI+KNL  CLDCH 
Sbjct: 716 KQGYKPDITCALHMVDHELKLESLKYHSERLAIAFALMNTPAGTPIRIMKNLTACLDCHA 775

Query: 750 ATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
             K ISK+  R I+VRD+ RFHHFK GVCSCGDYW
Sbjct: 776 VIKMISKIVNRDIIVRDSRRFHHFKDGVCSCGDYW 810



 Score = 92.4 bits (228), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 61/196 (31%), Positives = 99/196 (50%), Gaps = 9/196 (4%)

Query: 325 GHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMI 384
           GHLH    +        I S + +L+A    YS   ++ AA+ LF  S  ++  +W  M+
Sbjct: 57  GHLHRARAMFDQMPHKNIFSLNLILSA----YSSSGDLPAAQHLFLSSPHRNATTWTIMM 112

Query: 385 AGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFE 444
             +   G T +A+SLF+ M    V P+ VTV+++L+    L   ++   +H        +
Sbjct: 113 RAHAAAGRTSDALSLFRAMLGEGVIPDRVTVTTVLN----LPGCTVPS-LHPFAIKFGLD 167

Query: 445 SNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEM 504
           ++++V   L+D Y K G +  AR +F  M  K  VT+N M+ G    G   +ALQLF+ M
Sbjct: 168 THVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAM 227

Query: 505 LHSGIRPSGVTFLSVL 520
             +GI  +  TF S+L
Sbjct: 228 RRAGIPATHFTFSSIL 243


>gi|38606535|emb|CAE06013.3| OSJNBa0016O02.23 [Oryza sativa Japonica Group]
 gi|116310014|emb|CAH67039.1| OSIGBa0124N08.1 [Oryza sativa Indica Group]
 gi|116310420|emb|CAH67428.1| OSIGBa0150F01.8 [Oryza sativa Indica Group]
          Length = 939

 Score =  466 bits (1200), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 263/759 (34%), Positives = 422/759 (55%), Gaps = 12/759 (1%)

Query: 34  IHGF--QNDLSTVTKLAHRLSDFKATC-----YARALFFSIPKPDLFLFNVIIRGFSNNE 86
           +HG   ++ L   T +A+ L    A C       R   +     D+  +N  I G   N 
Sbjct: 185 VHGLAVKSGLDRSTLVANALVGMYAKCGLLDSALRVFEWMRDGRDVASWNSAISGCVQNG 244

Query: 87  MPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVG 146
           M   ++  +  ++ +   + +++T   VL   +     + G  LH   +  G   ++   
Sbjct: 245 MFLEALDLFRRMQSD-GFSMNSYTTVGVLQVCAELAQLNHGRELHAALLKCGTEFNIQCN 303

Query: 147 AALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGT 206
           A LV +Y +  WV SA +VF ++ +KD + WNSM+S  ++N  + ++I  FG+MV+NG  
Sbjct: 304 ALLV-MYARCGWVDSALRVFREIGDKDYISWNSMLSCYVQNRLYAEAIDFFGEMVQNGFN 362

Query: 207 WLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAEL 266
             D   + ++L AV  +  L  G E+    +K      + +   L+  Y KC  VE +  
Sbjct: 363 -PDHACIVSLLSAVGHLGRLINGREVHAYAVKQRLDSDLQIANTLMDMYIKCYSVECSAR 421

Query: 267 LFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGH 326
           +F  +   D +S   +I+ Y  + +   ++  FR       +V+   +  ++        
Sbjct: 422 VFDRMRIKDHVSWTTIIACYAQSSRYSEAIGKFRTAQKEGIKVDPMMMGSILEACSGLKS 481

Query: 327 LHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAG 386
           + L   +HS+ +++G++ +  +   +  +Y    E+  A  +F+   +K + +W +M+  
Sbjct: 482 ISLLKQVHSYAIRNGLL-DLILKNRIIDIYGECGEVCYALNIFEMLDKKDIVTWTSMVNC 540

Query: 387 YTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESN 446
           + +NGL  EA++LF +M  + + P+ V +  IL A A L +++ GK +H  +    F   
Sbjct: 541 FAENGLLHEAVALFGKMLNAGIQPDSVALVGILGAIAGLSSLTKGKEIHGFLIRGKFPVE 600

Query: 447 IYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLH 506
             V ++L+DMY+ CG++  A ++FD    K  V W  MI+  G+HGHG +A+ +F  ML 
Sbjct: 601 GAVVSSLVDMYSGCGSMNYALKVFDEAKCKDVVLWTAMINATGMHGHGKQAIYIFKRMLE 660

Query: 507 SGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLE 566
           +G+ P  V+FL++LYACSH+ LV EG      M+  +  +P  EHYAC+VD+LGR+GQ E
Sbjct: 661 TGVSPDHVSFLALLYACSHSKLVDEGKFYLDMMVSKYKLQPWQEHYACVVDLLGRSGQTE 720

Query: 567 KALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYS 626
           +A +FIK + +EP   VW ALLGAC IHK+  LA +A++KL EL+P+N G +VL+SN+++
Sbjct: 721 EAYKFIKSMPLEPKSVVWCALLGACRIHKNHELAMIATDKLLELEPDNPGNYVLVSNVFA 780

Query: 627 AERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNG 686
               +     +R  + ++ L K P C+ IE+G T H FT+ D  H  S AI+  L ++  
Sbjct: 781 EMGKWNNVKEIRTKMTEQGLRKDPACSWIEIGNTVHTFTARDHSHRDSQAIHLKLAEITE 840

Query: 687 KMREAG-FQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCL 745
           K+R  G +  +T   LHDV EEEK  ++  HSE+LAI+FGLI+T  GT +RI KNLRVC 
Sbjct: 841 KLRREGQYVEDTSFVLHDVSEEEKIDLLHRHSERLAISFGLISTASGTPLRIAKNLRVCG 900

Query: 746 DCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           DCH  TK +SK+  R IVVRDANRFHHF GG CSCGD+W
Sbjct: 901 DCHEFTKLVSKLFEREIVVRDANRFHHFSGGTCSCGDFW 939



 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 171/618 (27%), Positives = 294/618 (47%), Gaps = 14/618 (2%)

Query: 13  LSLLKGAKTQSQLTQTHAQIIIHGFQNDLST---VTKLAHRLSDFKATCYARALFFSIPK 69
           L L+   +  S+  Q HA  +  G   D       TKL            A  LF  +P 
Sbjct: 62  LDLVAVRRAVSEGRQLHAHAVATGALGDDDAGFLATKLLFMYGKCGRLPDAHRLFDGMPA 121

Query: 70  PDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALT---PDNFTYSFVLSAASACCDRSI 126
             +F +N +I    ++     ++  Y  +R +  +    PD  T + VL A  A  D   
Sbjct: 122 RTVFSWNALIGACLSSGGAGEAVGVYRAMRASEPVAGAAPDGCTLASVLKACGAEGDGRC 181

Query: 127 GVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPE-KDTVLWNSMISGLM 185
           G  +HG A+ SG      V  ALV +Y K   + SA +VF+ M + +D   WNS ISG +
Sbjct: 182 GSEVHGLAVKSGLDRSTLVANALVGMYAKCGLLDSALRVFEWMRDGRDVASWNSAISGCV 241

Query: 186 KNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHV 245
           +N  F +++ +F  M  +G + ++S +   VL   AE+ +L  G E+    LK G   ++
Sbjct: 242 QNGMFLEALDLFRRMQSDGFS-MNSYTTVGVLQVCAELAQLNHGRELHAALLKCGTEFNI 300

Query: 246 YVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLAS 305
                L+  Y++CG V+ A  +FR+I   D IS N+M+S Y  N     ++  F +++ +
Sbjct: 301 QC-NALLVMYARCGWVDSALRVFREIGDKDYISWNSMLSCYVQNRLYAEAIDFFGEMVQN 359

Query: 306 AERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAA 365
               + + IV L+      G L     +H++ +K  + S+  +   L  +Y +   +E +
Sbjct: 360 GFNPDHACIVSLLSAVGHLGRLINGREVHAYAVKQRLDSDLQIANTLMDMYIKCYSVECS 419

Query: 366 RKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQL 425
            ++FD    K   SW  +IA Y Q+    EAI  F+  Q   +  +P+ + SIL AC+ L
Sbjct: 420 ARVFDRMRIKDHVSWTTIIACYAQSSRYSEAIGKFRTAQKEGIKVDPMMMGSILEACSGL 479

Query: 426 GAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMI 485
            +ISL K VH     RN   ++ +   +ID+Y +CG +  A  +F+++  K  VTW +M+
Sbjct: 480 KSISLLKQVHSYA-IRNGLLDLILKNRIIDIYGECGEVCYALNIFEMLDKKDIVTWTSMV 538

Query: 486 SGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGF 545
           + +  +G   EA+ LF +ML++GI+P  V  + +L A +    + +G EI   +I    F
Sbjct: 539 NCFAENGLLHEAVALFGKMLNAGIQPDSVALVGILGAIAGLSSLTKGKEIHGFLIRGK-F 597

Query: 546 KPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASE 605
                  + +VD+    G +  AL+       +    +W A++ A  +H     A    +
Sbjct: 598 PVEGAVVSSLVDMYSGCGSMNYALKVFDEAKCKD-VVLWTAMINATGMHGHGKQAIYIFK 656

Query: 606 KLFE--LDPENVGYHVLL 621
           ++ E  + P++V +  LL
Sbjct: 657 RMLETGVSPDHVSFLALL 674



 Score =  189 bits (479), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 145/492 (29%), Positives = 230/492 (46%), Gaps = 40/492 (8%)

Query: 106 PDNFTYSFVLSAASACCDRSIGVLLHGHAIVSG-YGSDL--FVGAALVDLYFKFSWVKSA 162
           P    Y +VL   +     S G  LH HA+ +G  G D   F+   L+ +Y K   +  A
Sbjct: 53  PPTDHYGWVLDLVAVRRAVSEGRQLHAHAVATGALGDDDAGFLATKLLFMYGKCGRLPDA 112

Query: 163 RKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRN---GGTWLDSTSVAAVLPA 219
            ++FD MP +    WN++I   + +    +++ V+  M  +    G   D  ++A+VL A
Sbjct: 113 HRLFDGMPARTVFSWNALIGACLSSGGAGEAVGVYRAMRASEPVAGAAPDGCTLASVLKA 172

Query: 220 VAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLF---RDIVRPDL 276
                + R G E+  L +K G      V   LV  Y+KCG ++ A  +F   RD    D+
Sbjct: 173 CGAEGDGRCGSEVHGLAVKSGLDRSTLVANALVGMYAKCGLLDSALRVFEWMRD--GRDV 230

Query: 277 ISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSF 336
            S N+ ISG   NG    +L LFR++ +    +NS T VG++ V      L+    +H+ 
Sbjct: 231 ASWNSAISGCVQNGMFLEALDLFRRMQSDGFSMNSYTTVGVLQVCAELAQLNHGRELHAA 290

Query: 337 CLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEA 396
            LK G   N     AL  +Y+R   +++A ++F E  +K   SWN+M++ Y QN L  EA
Sbjct: 291 LLKCGTEFNIQC-NALLVMYARCGWVDSALRVFREIGDKDYISWNSMLSCYVQNRLYAEA 349

Query: 397 ISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDM 456
           I  F EM  +   P+   + S+LSA   LG +  G+ VH     +  +S++ ++  L+DM
Sbjct: 350 IDFFGEMVQNGFNPDHACIVSLLSAVGHLGRLINGREVHAYAVKQRLDSDLQIANTLMDM 409

Query: 457 YAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTF 516
           Y KC ++  +  +FD M  K  V+W T+I+ Y       EA+  F      GI+   +  
Sbjct: 410 YIKCYSVECSARVFDRMRIKDHVSWTTIIACYAQSSRYSEAIGKFRTAQKEGIKVDPMMM 469

Query: 517 LSVLYACS-----------HAGLVREG--DEIFQSMIHDHGFKPLAEHYACMVDILGRAG 563
            S+L ACS           H+  +R G  D I ++ I               +DI G  G
Sbjct: 470 GSILEACSGLKSISLLKQVHSYAIRNGLLDLILKNRI---------------IDIYGECG 514

Query: 564 QLEKALEFIKGL 575
           ++  AL   + L
Sbjct: 515 EVCYALNIFEML 526


>gi|297800922|ref|XP_002868345.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata]
 gi|297314181|gb|EFH44604.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata]
          Length = 1047

 Score =  466 bits (1200), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 267/789 (33%), Positives = 425/789 (53%), Gaps = 16/789 (2%)

Query: 3    MKTPQSRNLFLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARA 62
            M TP + +  LS  K  ++     Q H  ++  GF +D      L        +   A  
Sbjct: 268  MPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGSLISAEH 327

Query: 63   LFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACC 122
            +F ++ + D   +N +I G S     + ++  +  ++ +  L PD+ T + ++ A S+  
Sbjct: 328  IFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMQLD-GLEPDSNTLASLVVACSSDG 386

Query: 123  DRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMI- 181
                G  LH +    G+ S+  +  AL++LY K S +++A   F +   ++ VLWN M+ 
Sbjct: 387  TLFSGQQLHAYTTKLGFASNDKIEGALLNLYAKCSDIETALNYFLETEVENVVLWNVMLV 446

Query: 182  -SGLMKNCCFQDSIWVFGDM-----VRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCL 235
              GL+ +   ++S  +F  M     V N  T+       ++L     + +L LG +I   
Sbjct: 447  AYGLLDD--LRNSFRIFRQMQIEEIVPNQYTY------PSILKTCIRLGDLELGEQIHSQ 498

Query: 236  GLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESS 295
             +K  F  + YV + L+  Y+K G+++ A  +       D++S   MI+GYT     + +
Sbjct: 499  IIKTSFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKA 558

Query: 296  LRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTV 355
            L  FRQ+L    R +   +   +        L     IH+    SG  S+     AL T+
Sbjct: 559  LTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTL 618

Query: 356  YSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTV 415
            YS+   +E A   F+++      +WNA+++G+ Q+G  EEA+ +F  M    +  N  T 
Sbjct: 619  YSKCGNIEEAYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFARMNREGIDSNNFTF 678

Query: 416  SSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSH 475
             S + A ++   +  GK VH ++    ++S   V  A+I MYAKCG+I +A++ F  +S 
Sbjct: 679  GSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNAIISMYAKCGSISDAKKQFLELSM 738

Query: 476  KSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEI 535
            K+EV+WN MI+ Y  HG G EAL  F +M+HS +RP+ VT + VL ACSH GLV +G E 
Sbjct: 739  KNEVSWNAMINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIEY 798

Query: 536  FQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHK 595
            F+SM  ++G  P  EHY C+VD+L RAG L +A +FI  + +EP   VW  LL AC++HK
Sbjct: 799  FESMNTEYGLAPKPEHYVCVVDMLTRAGLLSRAKDFILEMPIEPDALVWRTLLSACVVHK 858

Query: 596  DTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLI 655
            +  +   A+  L EL+PE+   +VLLSN+Y+  R +      RQ +K++ + K PG + I
Sbjct: 859  NMEIGEFAAHHLLELEPEDSATYVLLSNLYAVCRKWDARDLTRQKMKEKGVKKEPGQSWI 918

Query: 656  EVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKV 715
            EV  + H F  GDQ HP +  I+   + L  +  E G+  +  + L ++++E+K+  + +
Sbjct: 919  EVKNSIHSFYVGDQNHPLADEIHEYFKDLTKRASEIGYVQDCFSLLSELQQEQKDPTIFI 978

Query: 716  HSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKG 775
            HSEKLAI+FGL++      I ++KNLRVC DCH   KF+SKV+ R I+VRDA RFHHF+G
Sbjct: 979  HSEKLAISFGLLSLPATMPINVMKNLRVCNDCHDWIKFVSKVSNREIIVRDAYRFHHFEG 1038

Query: 776  GVCSCGDYW 784
            G CSC DYW
Sbjct: 1039 GACSCKDYW 1047



 Score =  226 bits (575), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 154/570 (27%), Positives = 270/570 (47%), Gaps = 4/570 (0%)

Query: 25  LTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSN 84
           + Q HA+II  G          L    S       AR +F  +   D   +  +I G S 
Sbjct: 189 VEQIHARIIYQGLGKSTIVCNPLIDLYSRNGFVDRARRVFDGLYLKDHSSWVAMISGLSK 248

Query: 85  NEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLF 144
           NE    +I  +  +     + P  + +S VLSA        IG  LHG  +  G+ SD +
Sbjct: 249 NECEVEAIRLFCDMYV-LGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTY 307

Query: 145 VGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNG 204
           V  ALV LYF    + SA  +F  M ++D V +N++I+GL + C + +        ++  
Sbjct: 308 VCNALVSLYFHLGSLISAEHIFSNMSQRDAVTYNTLINGLSQ-CGYGEKAMELFKRMQLD 366

Query: 205 GTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERA 264
           G   DS ++A+++ A +    L  G ++     KLGF  +  +   L++ Y+KC ++E A
Sbjct: 367 GLEPDSNTLASLVVACSSDGTLFSGQQLHAYTTKLGFASNDKIEGALLNLYAKCSDIETA 426

Query: 265 ELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPF 324
              F +    +++  N M+  Y       +S R+FRQ+       N  T   ++      
Sbjct: 427 LNYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRL 486

Query: 325 GHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMI 384
           G L L   IHS  +K+    N+ V + L  +Y++L +++ A  +    + K + SW  MI
Sbjct: 487 GDLELGEQIHSQIIKTSFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMI 546

Query: 385 AGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFE 444
           AGYTQ    ++A++ F++M    +  + V +++ +SACA L A+  G+ +H       F 
Sbjct: 547 AGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFS 606

Query: 445 SNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEM 504
           S++    AL+ +Y+KCGNI EA   F+       + WN ++SG+   G+  EAL++F+ M
Sbjct: 607 SDLPFQNALVTLYSKCGNIEEAYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFARM 666

Query: 505 LHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQ 564
              GI  +  TF S + A S    +++G ++  ++I   G+    E    ++ +  + G 
Sbjct: 667 NREGIDSNNFTFGSAVKAASETANMKQGKQV-HAVITKTGYDSETEVCNAIISMYAKCGS 725

Query: 565 LEKALEFIKGLAVEPGPAVWGALLGACMIH 594
           +  A +    L+++     W A++ A   H
Sbjct: 726 ISDAKKQFLELSMK-NEVSWNAMINAYSKH 754



 Score =  172 bits (436), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 134/496 (27%), Positives = 227/496 (45%), Gaps = 46/496 (9%)

Query: 100 KNTALTPDNFTYSFVLSAASACCDRSIGVL-----LHGHAIVSGYGSDLFVGAALVDLYF 154
           +N  + P++ T  ++L      C ++ G L     LH   +  G+ ++  +   L+D Y 
Sbjct: 59  ENCGIRPNHQTLKWLLEG----CLKTNGSLDEGRKLHSQILKLGFDNNACLSEKLLDFYL 114

Query: 155 KFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVR-----NGGTW-- 207
               +  A KVFD+MPE+    WN MI  L           +FG MV      N GT+  
Sbjct: 115 FKGDLDGALKVFDEMPERTIFTWNKMIKELASRSLSGKVFCLFGRMVNENVTPNEGTFSG 174

Query: 208 -LDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAEL 266
            L++    +V   V E    R+        +  G      V   L+  YS+ G V+RA  
Sbjct: 175 VLEACRGGSVAFDVVEQIHARI--------IYQGLGKSTIVCNPLIDLYSRNGFVDRARR 226

Query: 267 LFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFG- 325
           +F  +   D  S  AMISG + N     ++RLF  +           ++G++P  Y F  
Sbjct: 227 VFDGLYLKDHSSWVAMISGLSKNECEVEAIRLFCDMY----------VLGIMPTPYAFSS 276

Query: 326 ---------HLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKS 376
                     L +   +H   LK G  S++ V  AL ++Y  L  + +A  +F   S++ 
Sbjct: 277 VLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGSLISAEHIFSNMSQRD 336

Query: 377 LASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHE 436
             ++N +I G +Q G  E+A+ LF+ MQ   + P+  T++S++ AC+  G +  G+ +H 
Sbjct: 337 AVTYNTLINGLSQCGYGEKAMELFKRMQLDGLEPDSNTLASLVVACSSDGTLFSGQQLHA 396

Query: 437 LVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLE 496
                 F SN  +  AL+++YAKC +I  A   F     ++ V WN M+  YGL      
Sbjct: 397 YTTKLGFASNDKIEGALLNLYAKCSDIETALNYFLETEVENVVLWNVMLVAYGLLDDLRN 456

Query: 497 ALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMV 556
           + ++F +M    I P+  T+ S+L  C   G +  G++I  S I    F+  A   + ++
Sbjct: 457 SFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQI-HSQIIKTSFQLNAYVCSVLI 515

Query: 557 DILGRAGQLEKALEFI 572
           D+  + G+L+ A + +
Sbjct: 516 DMYAKLGKLDTAWDIL 531



 Score =  152 bits (383), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 114/427 (26%), Positives = 203/427 (47%), Gaps = 6/427 (1%)

Query: 199 DMVRNGGTWLDSTSVAAVLPAVAEVQ-ELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSK 257
           D V N G   +  ++  +L    +    L  G ++    LKLGF ++  +   L+ FY  
Sbjct: 56  DSVENCGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGFDNNACLSEKLLDFYLF 115

Query: 258 CGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGL 317
            G+++ A  +F ++    + + N MI        +     LF +++      N  T  G+
Sbjct: 116 KGDLDGALKVFDEMPERTIFTWNKMIKELASRSLSGKVFCLFGRMVNENVTPNEGTFSGV 175

Query: 318 IPVFYPFG-HLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKS 376
           +           +   IH+  +  G+  ++ V   L  +YSR   ++ AR++FD    K 
Sbjct: 176 LEACRGGSVAFDVVEQIHARIIYQGLGKSTIVCNPLIDLYSRNGFVDRARRVFDGLYLKD 235

Query: 377 LASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHE 436
            +SW AMI+G ++N    EAI LF +M    + P P   SS+LSAC ++ ++ +G+ +H 
Sbjct: 236 HSSWVAMISGLSKNECEVEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHG 295

Query: 437 LVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLE 496
           LV    F S+ YV  AL+ +Y   G+++ A  +F  MS +  VT+NT+I+G    G+G +
Sbjct: 296 LVLKLGFSSDTYVCNALVSLYFHLGSLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEK 355

Query: 497 ALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMV 556
           A++LF  M   G+ P   T  S++ ACS  G +  G ++  +     GF    +    ++
Sbjct: 356 AMELFKRMQLDGLEPDSNTLASLVVACSSDGTLFSGQQL-HAYTTKLGFASNDKIEGALL 414

Query: 557 DILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKD-TNLARVASE-KLFELDPEN 614
           ++  +   +E AL +     VE    +W  +L A  +  D  N  R+  + ++ E+ P  
Sbjct: 415 NLYAKCSDIETALNYFLETEVE-NVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQ 473

Query: 615 VGYHVLL 621
             Y  +L
Sbjct: 474 YTYPSIL 480


>gi|357127388|ref|XP_003565363.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g01510-like [Brachypodium distachyon]
          Length = 814

 Score =  466 bits (1200), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 273/781 (34%), Positives = 431/781 (55%), Gaps = 17/781 (2%)

Query: 15  LLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPK--PDL 72
           LL    +  +L Q  A       +N+  ++ ++    S       A  LF S P    D 
Sbjct: 40  LLHSLISSGRLAQARALFDQMPHRNNAFSLNRMLSGYSRSGQLSAAHHLFLSSPPHLRDA 99

Query: 73  FLFNVIIRGFSNNEMPKSSIC---FYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVL 129
             + V+I  F++    ++S     F   LR+  A  PD  T + VL+   A    +  ++
Sbjct: 100 VTWTVMIGAFASAPGARASDAVSLFRDMLREGVA--PDRVTVATVLNLPPASGGTAAAII 157

Query: 130 ---LHGHAIVSGY-GSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLM 185
              LH  A+  G   S++ V   L+D Y K   + +AR+VF +MP +D+V +N+M+ G  
Sbjct: 158 IASLHPFALKLGLLHSNVVVCNTLLDAYCKHGLLAAARRVFQEMPHRDSVTYNAMMMGCS 217

Query: 186 KNCCFQDSIWVFGDMVRNGGTWLDST--SVAAVLPAVAEVQELRLGMEIQCLGLKLGFHD 243
           K     +++ +F  M R G   L +T  + + VL     V +L LG ++  L +      
Sbjct: 218 KEGSHAEALDLFAAMRRKG---LAATRFTFSTVLTVATGVGDLCLGRQVHGL-VARATSS 273

Query: 244 HVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLL 303
           +V+V   L+ FYSKC  ++  + LF +++  D +S N MI+GY  N      LRLFR++ 
Sbjct: 274 NVFVNNSLLDFYSKCDCLDEMKKLFHEMIERDNVSYNVMIAGYAWNRCASIVLRLFREMQ 333

Query: 304 ASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEME 363
           + +    +     L+ V     H+ +   IH+  +  G+ S   V  AL  +YS+   ++
Sbjct: 334 SLSFDRQALPYASLLSVAGSVPHIGIGKQIHAQLVLLGLSSEDLVGNALIDMYSKCGMLD 393

Query: 364 AARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACA 423
           AA+  F   ++K+  SW AMI G  QNG  EEA+ LF  M+ + ++P+  T SS + A +
Sbjct: 394 AAKTNFINKNDKTGVSWTAMITGCVQNGQQEEALQLFCGMRRAGLSPDRATFSSTIKASS 453

Query: 424 QLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNT 483
            L  I LG+ +H  +      S+++  +AL+DMY KCG + EA + FD M  ++ ++WN 
Sbjct: 454 NLAMIGLGRQLHSYLIRSGHMSSVFSGSALLDMYTKCGCLDEALQTFDEMPERNSISWNA 513

Query: 484 MISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDH 543
           +IS Y  +G    A+++F  ML  G +P  VTFLSVL ACSH GL  E  + F+ M +++
Sbjct: 514 VISAYAHYGQAKNAIKMFEGMLCYGFKPDSVTFLSVLSACSHNGLAEECMKYFELMEYEY 573

Query: 544 GFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVA 603
           G  P  EHY+C++D LGR G+ +K  E +  +  E  P +W ++L +C  H + +LARVA
Sbjct: 574 GISPWKEHYSCVIDTLGRVGRFDKVQEMLGEMPFEDDPIIWSSILHSCRTHGNQDLARVA 633

Query: 604 SEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHV 663
           +EKLF +   +   +V+LSNI++    +  AA V+++++ R L K  G + +EV    + 
Sbjct: 634 AEKLFSMGSTDATPYVILSNIFAKAGKWEDAAGVKKIMRDRGLRKETGYSWVEVKHKVYS 693

Query: 664 FTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIA 723
           F+S DQ +P  T I   LE+L  +M + G++ +T   L  V+++ K   +K HSE+LAIA
Sbjct: 694 FSSNDQTNPMITEIKDELERLYKEMDKQGYKPDTSCTLQQVDDDIKLESLKYHSERLAIA 753

Query: 724 FGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDY 783
           F LI T PGT IR++KNL  C+DCH+A K +SK+  R I+VRD++RFHHFK G CSCGDY
Sbjct: 754 FALINTPPGTPIRVMKNLSACVDCHSAIKMMSKIVNRDIIVRDSSRFHHFKDGFCSCGDY 813

Query: 784 W 784
           W
Sbjct: 814 W 814


>gi|49333376|gb|AAT64016.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
          Length = 805

 Score =  466 bits (1199), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 240/626 (38%), Positives = 367/626 (58%), Gaps = 23/626 (3%)

Query: 160 KSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPA 219
           +SA ++FDK+ ++D + WNSMISG + N   +  + ++  M+  G   +D  ++ +VL  
Sbjct: 202 ESAFELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGID-VDLATIISVLVG 260

Query: 220 VAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISC 279
            A    L LG  +  L +K  F   +     L+  YSKCG+++ A  +F  +   +++S 
Sbjct: 261 CANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSW 320

Query: 280 NAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLK 339
            +MI+GYT +G+++ +++L +Q+     +++   I  ++      G L     +H +   
Sbjct: 321 TSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKA 380

Query: 340 SGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISL 399
           + + SN  V  AL  +Y++   MEAA  +F     K + SWN MI               
Sbjct: 381 NNMESNLFVCNALMDMYAKCGSMEAANSVFSTMVVKDIISWNTMIG-------------- 426

Query: 400 FQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAK 459
                  ++ P+  T++ +L ACA L A+  GK +H  +    + S+ +V+ AL+D+Y K
Sbjct: 427 -------ELKPDSRTMACVLPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVK 479

Query: 460 CGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSV 519
           CG +  AR LFD++  K  V+W  MI+GYG+HG+G EA+  F+EM  +GI P  V+F+S+
Sbjct: 480 CGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISI 539

Query: 520 LYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEP 579
           LYACSH+GL+ +G   F  M +D   +P  EHYACMVD+L R G L KA EFI+ L + P
Sbjct: 540 LYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFIETLPIAP 599

Query: 580 GPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQ 639
              +WGALL  C  + D  LA   +E++FEL+PEN GY+VLL+NIY+    + +   +R+
Sbjct: 600 DATIWGALLCGCRNYHDIELAEKVAERVFELEPENSGYYVLLANIYAEAEKWEEVKRLRE 659

Query: 640 VVKKRKLAKAPGCTLIEVGGTPHVFTSGDQ-LHPQSTAIYAMLEKLNGKMREAGFQTETV 698
            + K+ L K PGC+ IE+ G  ++F SG+   HP S  I ++L+K+  KM+E G   +T 
Sbjct: 660 KIGKQGLRKNPGCSWIEIKGKVNLFVSGNNSSHPHSKNIESLLKKMRRKMKEEGHFPKTK 719

Query: 699 TALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVT 758
            AL + +E +KE+ +  HSEKLA+AFGL+   P   IR+ KNLRVC DCH   KF+SK T
Sbjct: 720 YALINADEMQKEMALCGHSEKLAMAFGLLTLPPRKTIRVTKNLRVCGDCHEMAKFMSKET 779

Query: 759 GRVIVVRDANRFHHFKGGVCSCGDYW 784
            R IV+RD NRFHHFK G CSC  +W
Sbjct: 780 RREIVLRDPNRFHHFKDGYCSCRGFW 805



 Score =  175 bits (444), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 109/342 (31%), Positives = 178/342 (52%), Gaps = 42/342 (12%)

Query: 244 HVYVLTGLVSFYSKCGEVERAELLFRDIV-------RP-------------DLISCNAMI 283
           +VY+   +VS Y+K G+ + +  LF+ +V       RP             D+IS N+MI
Sbjct: 164 NVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESAFELFDKLCDRDVISWNSMI 223

Query: 284 SGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIV 343
           SGY  NG TE  L +++Q++     V+ +TI+ ++      G L L   +HS  +KS   
Sbjct: 224 SGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFE 283

Query: 344 SNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEM 403
              +    L  +YS+  +++ A ++F++  E+++ SW +MIAGYT++G ++ AI L Q+M
Sbjct: 284 RRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQQM 343

Query: 404 QASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNI 463
           +   V  + V ++SIL ACA+ G++  GK VH+ +K+ N ESN++V  AL+DMYAKCG++
Sbjct: 344 EKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYAKCGSM 403

Query: 464 VEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYAC 523
             A  +F  M  K  ++WNTMI                       ++P   T   VL AC
Sbjct: 404 EAANSVFSTMVVKDIISWNTMI---------------------GELKPDSRTMACVLPAC 442

Query: 524 SHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQL 565
           +    +  G EI    I  +G+         +VD+  + G L
Sbjct: 443 ASLSALERGKEI-HGYILRNGYSSDRHVANALVDLYVKCGVL 483



 Score =  155 bits (393), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 114/430 (26%), Positives = 196/430 (45%), Gaps = 25/430 (5%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           A  LF  +   D+  +N +I G+ +N + +  +  Y  +     +  D  T   VL   +
Sbjct: 204 AFELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMY-LGIDVDLATIISVLVGCA 262

Query: 120 ACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNS 179
                S+G  +H  AI S +   +     L+D+Y K   +  A +VF+KM E++ V W S
Sbjct: 263 NSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTS 322

Query: 180 MISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKL 239
           MI+G  ++     +I +   M +  G  LD  ++ ++L A A    L  G ++       
Sbjct: 323 MIAGYTRDGRSDGAIKLLQQMEKE-GVKLDVVAITSILHACARSGSLDNGKDVHDYIKAN 381

Query: 240 GFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLF 299
               +++V   L+  Y+KCG +E A  +F  +V  D+IS N MI                
Sbjct: 382 NMESNLFVCNALMDMYAKCGSMEAANSVFSTMVVKDIISWNTMIGEL------------- 428

Query: 300 RQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRL 359
                   + +S T+  ++P       L     IH + L++G  S+  V  AL  +Y + 
Sbjct: 429 --------KPDSRTMACVLPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKC 480

Query: 360 NEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSIL 419
             +  AR LFD    K L SW  MIAGY  +G   EAI+ F EM+ + + P+ V+  SIL
Sbjct: 481 GVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISIL 540

Query: 420 SACAQLGAISLG-KWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSE 478
            AC+  G +  G ++ + +    N E  +     ++D+ ++ GN+ +A E  + +    +
Sbjct: 541 YACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFIETLPIAPD 600

Query: 479 VT-WNTMISG 487
            T W  ++ G
Sbjct: 601 ATIWGALLCG 610



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 86/353 (24%), Positives = 155/353 (43%), Gaps = 62/353 (17%)

Query: 333 IHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMI-------- 384
           +HS    + +  + ++   L + Y+   +++  R++FD   +K++  WN M+        
Sbjct: 121 VHSIIKSNSVGVDEALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGD 180

Query: 385 -------------------------------------------AGYTQNGLTEEAISLFQ 401
                                                      +GY  NGLTE  + +++
Sbjct: 181 FKESICLFKIMVEKGIEGKRPESAFELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYK 240

Query: 402 EMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCG 461
           +M    +  +  T+ S+L  CA  G +SLGK VH L    +FE  I  S  L+DMY+KCG
Sbjct: 241 QMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCG 300

Query: 462 NIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLY 521
           ++  A  +F+ M  ++ V+W +MI+GY   G    A++L  +M   G++   V   S+L+
Sbjct: 301 DLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILH 360

Query: 522 ACSHAGLVREGDEIFQSMIHDHGFKPLAEHYAC--MVDILGRAGQLEKALEFIKGLAVEP 579
           AC+ +G +  G ++   +  ++    L   + C  ++D+  + G +E A      + V+ 
Sbjct: 361 ACARSGSLDNGKDVHDYIKANNMESNL---FVCNALMDMYAKCGSMEAANSVFSTMVVKD 417

Query: 580 GPAVWGALLGACMIHKDTN---LARVASEKLFELDPENVGYHVLLSNIYSAER 629
             + W  ++G       T    L   AS    E   E  GY  +L N YS++R
Sbjct: 418 IIS-WNTMIGELKPDSRTMACVLPACASLSALERGKEIHGY--ILRNGYSSDR 467



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 53/184 (28%), Positives = 87/184 (47%), Gaps = 18/184 (9%)

Query: 374 EKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKW 433
           +  +  +NA I  + Q G  E A+ L    + S++     T SS+L  CA L + + GK 
Sbjct: 63  DHQVTDYNAKILHFCQLGDLENAMELICMCKKSELETK--TYSSVLQLCAGLKSFTDGKK 120

Query: 434 VHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGH 493
           VH ++KS +   +  +   L+  YA CG++ E R +FD M  K+   WN M+S Y   G 
Sbjct: 121 VHSIIKSNSVGVDEALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGD 180

Query: 494 GLEALQLFSEMLHSGI---RPSG-------------VTFLSVLYACSHAGLVREGDEIFQ 537
             E++ LF  M+  GI   RP               +++ S++      GL   G  I++
Sbjct: 181 FKESICLFKIMVEKGIEGKRPESAFELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYK 240

Query: 538 SMIH 541
            M++
Sbjct: 241 QMMY 244


>gi|188509980|gb|ACD56662.1| putative pentatricopeptide [Gossypium arboreum]
          Length = 805

 Score =  466 bits (1199), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 239/626 (38%), Positives = 368/626 (58%), Gaps = 23/626 (3%)

Query: 160 KSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPA 219
           +SA ++FDK+ ++D + WNSMISG + N   +  + ++  M+  G   +D  ++ +VL  
Sbjct: 202 ESAFELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGID-VDLATIISVLVG 260

Query: 220 VAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISC 279
            A    L LG  +  L +K  F   +     L+  YSKCG+++ A  +F  +   +++S 
Sbjct: 261 CANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSW 320

Query: 280 NAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLK 339
            +MI+GYT +G+++ +++L +Q+     +++   I  ++      G L     +H +   
Sbjct: 321 TSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKA 380

Query: 340 SGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISL 399
           + + SN  V  AL  +Y++   MEAA  +F     K + SWN MI               
Sbjct: 381 NNMESNLFVCNALMDMYAKCGSMEAANSVFSTMVVKDIISWNTMIG-------------- 426

Query: 400 FQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAK 459
                  ++ P+  T++ +L ACA L A+  GK +H  +    + S+ +V+ AL+D+Y K
Sbjct: 427 -------ELKPDSRTMACVLPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVK 479

Query: 460 CGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSV 519
           CG +  AR LFD++  K  V+W  MI+GYG+HG+G EA+  F+EM  +GI P  V+F+S+
Sbjct: 480 CGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISI 539

Query: 520 LYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEP 579
           LYACSH+GL+ +G   F  M +D   +P  EHYACMVD+L R G L KA EF++ L + P
Sbjct: 540 LYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFMETLPIAP 599

Query: 580 GPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQ 639
              +WGALL  C  + D  LA   +E++FEL+PEN GY+VLL+NIY+    + +   +R+
Sbjct: 600 DATIWGALLCGCRNYHDIELAEKVAERVFELEPENTGYYVLLANIYAEAEKWEEVKRLRE 659

Query: 640 VVKKRKLAKAPGCTLIEVGGTPHVFTSGDQ-LHPQSTAIYAMLEKLNGKMREAGFQTETV 698
            + K+ L K PGC+ IE+ G  ++F SG+   HP S  I ++L+K+  KM+E G   +T 
Sbjct: 660 KIGKQGLRKNPGCSWIEIKGKVNLFVSGNNSSHPHSKNIESLLKKMRRKMKEEGHFPKTK 719

Query: 699 TALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVT 758
            AL + +E +KE+ +  HSEKLA+AFGL+   P   IR+ KNLRVC DCH   KF+SK T
Sbjct: 720 YALINADEMQKEMALCGHSEKLAMAFGLLTLPPRKTIRVTKNLRVCGDCHEMAKFMSKET 779

Query: 759 GRVIVVRDANRFHHFKGGVCSCGDYW 784
            R IV+RD+NRFHHFK G CSC  +W
Sbjct: 780 RREIVLRDSNRFHHFKDGYCSCRGFW 805



 Score =  175 bits (444), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 109/342 (31%), Positives = 178/342 (52%), Gaps = 42/342 (12%)

Query: 244 HVYVLTGLVSFYSKCGEVERAELLFRDIV-------RP-------------DLISCNAMI 283
           +VY+   +VS Y+K G+ + +  LF+ +V       RP             D+IS N+MI
Sbjct: 164 NVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESAFELFDKLCDRDVISWNSMI 223

Query: 284 SGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIV 343
           SGY  NG TE  L +++Q++     V+ +TI+ ++      G L L   +HS  +KS   
Sbjct: 224 SGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFE 283

Query: 344 SNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEM 403
              +    L  +YS+  +++ A ++F++  E+++ SW +MIAGYT++G ++ AI L Q+M
Sbjct: 284 RRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQQM 343

Query: 404 QASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNI 463
           +   V  + V ++SIL ACA+ G++  GK VH+ +K+ N ESN++V  AL+DMYAKCG++
Sbjct: 344 EKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYAKCGSM 403

Query: 464 VEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYAC 523
             A  +F  M  K  ++WNTMI                       ++P   T   VL AC
Sbjct: 404 EAANSVFSTMVVKDIISWNTMI---------------------GELKPDSRTMACVLPAC 442

Query: 524 SHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQL 565
           +    +  G EI    I  +G+         +VD+  + G L
Sbjct: 443 ASLSALERGKEI-HGYILRNGYSSDRHVANALVDLYVKCGVL 483



 Score =  155 bits (393), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 114/430 (26%), Positives = 196/430 (45%), Gaps = 25/430 (5%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           A  LF  +   D+  +N +I G+ +N + +  +  Y  +     +  D  T   VL   +
Sbjct: 204 AFELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMY-LGIDVDLATIISVLVGCA 262

Query: 120 ACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNS 179
                S+G  +H  AI S +   +     L+D+Y K   +  A +VF+KM E++ V W S
Sbjct: 263 NSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTS 322

Query: 180 MISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKL 239
           MI+G  ++     +I +   M +  G  LD  ++ ++L A A    L  G ++       
Sbjct: 323 MIAGYTRDGRSDGAIKLLQQMEKE-GVKLDVVAITSILHACARSGSLDNGKDVHDYIKAN 381

Query: 240 GFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLF 299
               +++V   L+  Y+KCG +E A  +F  +V  D+IS N MI                
Sbjct: 382 NMESNLFVCNALMDMYAKCGSMEAANSVFSTMVVKDIISWNTMIGEL------------- 428

Query: 300 RQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRL 359
                   + +S T+  ++P       L     IH + L++G  S+  V  AL  +Y + 
Sbjct: 429 --------KPDSRTMACVLPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKC 480

Query: 360 NEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSIL 419
             +  AR LFD    K L SW  MIAGY  +G   EAI+ F EM+ + + P+ V+  SIL
Sbjct: 481 GVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISIL 540

Query: 420 SACAQLGAISLG-KWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSE 478
            AC+  G +  G ++ + +    N E  +     ++D+ ++ GN+ +A E  + +    +
Sbjct: 541 YACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFMETLPIAPD 600

Query: 479 VT-WNTMISG 487
            T W  ++ G
Sbjct: 601 ATIWGALLCG 610



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 86/353 (24%), Positives = 155/353 (43%), Gaps = 62/353 (17%)

Query: 333 IHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMI-------- 384
           +HS    + +  + ++   L + Y+   +++  R++FD   +K++  WN M+        
Sbjct: 121 VHSIIKSNSVGVDGALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGD 180

Query: 385 -------------------------------------------AGYTQNGLTEEAISLFQ 401
                                                      +GY  NGLTE  + +++
Sbjct: 181 FKESICLFKIMVEKGIEGKRPESAFELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYK 240

Query: 402 EMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCG 461
           +M    +  +  T+ S+L  CA  G +SLGK VH L    +FE  I  S  L+DMY+KCG
Sbjct: 241 QMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCG 300

Query: 462 NIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLY 521
           ++  A  +F+ M  ++ V+W +MI+GY   G    A++L  +M   G++   V   S+L+
Sbjct: 301 DLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILH 360

Query: 522 ACSHAGLVREGDEIFQSMIHDHGFKPLAEHYAC--MVDILGRAGQLEKALEFIKGLAVEP 579
           AC+ +G +  G ++   +  ++    L   + C  ++D+  + G +E A      + V+ 
Sbjct: 361 ACARSGSLDNGKDVHDYIKANNMESNL---FVCNALMDMYAKCGSMEAANSVFSTMVVKD 417

Query: 580 GPAVWGALLGACMIHKDTN---LARVASEKLFELDPENVGYHVLLSNIYSAER 629
             + W  ++G       T    L   AS    E   E  GY  +L N YS++R
Sbjct: 418 IIS-WNTMIGELKPDSRTMACVLPACASLSALERGKEIHGY--ILRNGYSSDR 467



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 53/184 (28%), Positives = 86/184 (46%), Gaps = 18/184 (9%)

Query: 374 EKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKW 433
           +  +  +NA I  + Q G  E A+ L    Q S++     T  S+L  CA L + + GK 
Sbjct: 63  DHQVTDYNAKILHFCQLGDLENAMELICMCQKSELETK--TYGSVLQLCAGLKSFTDGKK 120

Query: 434 VHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGH 493
           VH ++KS +   +  +   L+  YA CG++ E R +FD M  K+   WN M+S Y   G 
Sbjct: 121 VHSIIKSNSVGVDGALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGD 180

Query: 494 GLEALQLFSEMLHSGI---RPSG-------------VTFLSVLYACSHAGLVREGDEIFQ 537
             E++ LF  M+  GI   RP               +++ S++      GL   G  I++
Sbjct: 181 FKESICLFKIMVEKGIEGKRPESAFELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYK 240

Query: 538 SMIH 541
            M++
Sbjct: 241 QMMY 244


>gi|359473818|ref|XP_002263197.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g13230, mitochondrial-like [Vitis vinifera]
          Length = 611

 Score =  466 bits (1199), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 246/581 (42%), Positives = 353/581 (60%), Gaps = 9/581 (1%)

Query: 208 LDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELL 267
            +S + A  L    +  E   G  + C  LK G    ++    L++ Y K   +  A  L
Sbjct: 36  FNSHAYANALQDCIQKDEPSRGKGLHCEILKRGGCLDLFAWNILLNMYVKSDFLCDASKL 95

Query: 268 FRDIVRPDLISCNAMISGYTCNGK----TESSLRLFRQLLASAERVNSSTIVGLIPVFYP 323
           F ++   + IS   +I GY  + +     E  +RL R++L      N  T   ++     
Sbjct: 96  FDEMPERNTISFVTLIQGYAESVRFLEAIELFVRLHREVLP-----NQFTFASVLQACAT 150

Query: 324 FGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAM 383
              L+L N IH   +K G+ S+  V  AL  VY++   ME + +LF ES  ++  +WN +
Sbjct: 151 MEGLNLGNQIHCHVIKIGLHSDVFVSNALMDVYAKCGRMENSMELFAESPHRNDVTWNTV 210

Query: 384 IAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNF 443
           I G+ Q G  E+A+ LF  M   +V    VT SS L ACA L A+  G  +H L     F
Sbjct: 211 IVGHVQLGDGEKALRLFLNMLEYRVQATEVTYSSALRACASLAALEPGLQIHSLTVKTTF 270

Query: 444 ESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSE 503
           + +I V+ ALIDMYAKCG+I +AR +FDLM+ + EV+WN MISGY +HG G EAL++F +
Sbjct: 271 DKDIVVTNALIDMYAKCGSIKDARLVFDLMNKQDEVSWNAMISGYSMHGLGREALRIFDK 330

Query: 504 MLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAG 563
           M  + ++P  +TF+ VL AC++AGL+ +G   F SMI DHG +P  EHY CMV +LGR G
Sbjct: 331 MQETEVKPDKLTFVGVLSACANAGLLDQGQAYFTSMIQDHGIEPCIEHYTCMVWLLGRGG 390

Query: 564 QLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSN 623
            L+KA++ I  +  +P   VW ALLGAC+IH D  L R++++++ E++P++   HVLLSN
Sbjct: 391 HLDKAVKLIDEIPFQPSVMVWRALLGACVIHNDIELGRISAQRVLEMEPQDKATHVLLSN 450

Query: 624 IYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEK 683
           +Y+  + +   A+VR+ +K++ + K PG + IE  GT H FT GD  HP+   I  MLE 
Sbjct: 451 MYATAKRWDNVASVRKNMKRKGVKKEPGLSWIESQGTVHSFTVGDTSHPEVRVINGMLEW 510

Query: 684 LNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRV 743
           L+ K ++AG+       L DVE+EEKE ++ VHSE+LA++FG+I T  G+ IRI+KNLR+
Sbjct: 511 LHMKTKKAGYIPNYNVVLLDVEDEEKERLLWVHSERLALSFGIIRTPSGSPIRIMKNLRI 570

Query: 744 CLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           C+DCH A K ISKV  R IVVRD NRFHHF+ G+CSCGDYW
Sbjct: 571 CVDCHAAIKCISKVVQREIVVRDINRFHHFQEGLCSCGDYW 611



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 120/425 (28%), Positives = 211/425 (49%), Gaps = 14/425 (3%)

Query: 73  FLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDR---SIGVL 129
           FL     RGFS  +  K +  F  H+      +P  F      +A   C  +   S G  
Sbjct: 7   FLIQFSRRGFSV-QSAKLTQEFVGHV------SPSEFNSHAYANALQDCIQKDEPSRGKG 59

Query: 130 LHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCC 189
           LH   +  G   DLF    L+++Y K  ++  A K+FD+MPE++T+ + ++I G  ++  
Sbjct: 60  LHCEILKRGGCLDLFAWNILLNMYVKSDFLCDASKLFDEMPERNTISFVTLIQGYAESVR 119

Query: 190 FQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLT 249
           F ++I +F  + R      +  + A+VL A A ++ L LG +I C  +K+G H  V+V  
Sbjct: 120 FLEAIELFVRLHRE--VLPNQFTFASVLQACATMEGLNLGNQIHCHVIKIGLHSDVFVSN 177

Query: 250 GLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERV 309
            L+  Y+KCG +E +  LF +    + ++ N +I G+   G  E +LRLF  +L    + 
Sbjct: 178 ALMDVYAKCGRMENSMELFAESPHRNDVTWNTVIVGHVQLGDGEKALRLFLNMLEYRVQA 237

Query: 310 NSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLF 369
              T    +        L     IHS  +K+    +  V  AL  +Y++   ++ AR +F
Sbjct: 238 TEVTYSSALRACASLAALEPGLQIHSLTVKTTFDKDIVVTNALIDMYAKCGSIKDARLVF 297

Query: 370 DESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAIS 429
           D  +++   SWNAMI+GY+ +GL  EA+ +F +MQ ++V P+ +T   +LSACA  G + 
Sbjct: 298 DLMNKQDEVSWNAMISGYSMHGLGREALRIFDKMQETEVKPDKLTFVGVLSACANAGLLD 357

Query: 430 LGK-WVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEV-TWNTMISG 487
            G+ +   +++    E  I   T ++ +  + G++ +A +L D +  +  V  W  ++  
Sbjct: 358 QGQAYFTSMIQDHGIEPCIEHYTCMVWLLGRGGHLDKAVKLIDEIPFQPSVMVWRALLGA 417

Query: 488 YGLHG 492
             +H 
Sbjct: 418 CVIHN 422



 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 93/341 (27%), Positives = 170/341 (49%), Gaps = 15/341 (4%)

Query: 52  SDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTY 111
           SDF   C A  LF  +P+ +   F  +I+G++ +     +I  +  L +   + P+ FT+
Sbjct: 86  SDF--LCDASKLFDEMPERNTISFVTLIQGYAESVRFLEAIELFVRLHRE--VLPNQFTF 141

Query: 112 SFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPE 171
           + VL A +     ++G  +H H I  G  SD+FV  AL+D+Y K   ++++ ++F + P 
Sbjct: 142 ASVLQACATMEGLNLGNQIHCHVIKIGLHSDVFVSNALMDVYAKCGRMENSMELFAESPH 201

Query: 172 KDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGME 231
           ++ V WN++I G ++    + ++ +F +M+       + T  +A L A A +  L  G++
Sbjct: 202 RNDVTWNTVIVGHVQLGDGEKALRLFLNMLEYRVQATEVTYSSA-LRACASLAALEPGLQ 260

Query: 232 IQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGK 291
           I  L +K  F   + V   L+  Y+KCG ++ A L+F  + + D +S NAMISGY+ +G 
Sbjct: 261 IHSLTVKTTFDKDIVVTNALIDMYAKCGSIKDARLVFDLMNKQDEVSWNAMISGYSMHGL 320

Query: 292 TESSLRLFRQLLASAERVNSSTIVGLIPV-----FYPFGHLHLTNCIHSFCLKSGIVSNS 346
              +LR+F ++  +  + +  T VG++           G  + T+ I       GI    
Sbjct: 321 GREALRIFDKMQETEVKPDKLTFVGVLSACANAGLLDQGQAYFTSMIQD----HGIEPCI 376

Query: 347 SVLTALSTVYSRLNEMEAARKLFDESS-EKSLASWNAMIAG 386
              T +  +  R   ++ A KL DE   + S+  W A++  
Sbjct: 377 EHYTCMVWLLGRGGHLDKAVKLIDEIPFQPSVMVWRALLGA 417



 Score = 66.6 bits (161), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 62/226 (27%), Positives = 99/226 (43%), Gaps = 15/226 (6%)

Query: 12  FLSLLKGAKTQSQLT---QTHAQIIIHGFQNDLSTVTKLAHRLSDFKATC----YARALF 64
           F S+L+   T   L    Q H  +I  G  +D+     +++ L D  A C     +  LF
Sbjct: 141 FASVLQACATMEGLNLGNQIHCHVIKIGLHSDVF----VSNALMDVYAKCGRMENSMELF 196

Query: 65  FSIPKPDLFLFNVIIRGFSN-NEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCD 123
              P  +   +N +I G     +  K+   F   L      T    TYS  L A ++   
Sbjct: 197 AESPHRNDVTWNTVIVGHVQLGDGEKALRLFLNMLEYRVQAT--EVTYSSALRACASLAA 254

Query: 124 RSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISG 183
              G+ +H   + + +  D+ V  AL+D+Y K   +K AR VFD M ++D V WN+MISG
Sbjct: 255 LEPGLQIHSLTVKTTFDKDIVVTNALIDMYAKCGSIKDARLVFDLMNKQDEVSWNAMISG 314

Query: 184 LMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLG 229
              +   ++++ +F D ++      D  +   VL A A    L  G
Sbjct: 315 YSMHGLGREALRIF-DKMQETEVKPDKLTFVGVLSACANAGLLDQG 359


>gi|302758830|ref|XP_002962838.1| hypothetical protein SELMODRAFT_79052 [Selaginella moellendorffii]
 gi|300169699|gb|EFJ36301.1| hypothetical protein SELMODRAFT_79052 [Selaginella moellendorffii]
          Length = 652

 Score =  466 bits (1199), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 252/649 (38%), Positives = 365/649 (56%), Gaps = 3/649 (0%)

Query: 138 GYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVF 197
           G+  + F+   L+DLY K      A  VF  +  K+   W  M++   +N  F D  W+F
Sbjct: 5   GWIRNRFLCNLLIDLYTKCDRFDDALAVFHGIQSKNVFSWTMMLAAFAENRDF-DRCWLF 63

Query: 198 GDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSK 257
              +   G       ++  L A  + +E+ +G  IQ   L  G  +   V T LVS Y K
Sbjct: 64  FRGMLLQGINPGEVGISIFLSACTDAREITIGRSIQLAILGTGIEEESIVQTALVSLYGK 123

Query: 258 CGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGL 317
            G    A  +F  +   D+++ +AM++ Y  NG    +L LFRQ+       N  T+V  
Sbjct: 124 LGHCTDAASVFLRMSHRDVVAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVSG 183

Query: 318 IPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSL 377
           +      G L     +H      GI S   V TAL  +Y +   +EAA + F +  EK++
Sbjct: 184 LDACASLGDLRSGALMHQRVEAQGIQSGVVVGTALVNLYGKCGRIEAAAEAFGQIVEKNV 243

Query: 378 ASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHEL 437
            +W+A+ A Y +N    +AI +   M    +APN  T  S+L ACA + A+  G+ +HE 
Sbjct: 244 VAWSAISAAYARNDRNRDAIRVLHRMDLEGLAPNSTTFVSVLDACAAIAALKQGRRIHER 303

Query: 438 VK--SRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGL 495
           +       ES++YV TAL++MY+KCGN+  A  +FD ++H   V WN++I+    HG   
Sbjct: 304 IHVLGGGLESDVYVLTALVNMYSKCGNLALAGNMFDKIAHLDLVLWNSLIATNAQHGQTE 363

Query: 496 EALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACM 555
           +AL+LF  M   G++P+ +TF SVL+ACSHAG++ +G + F S I DHG  P AEH+ CM
Sbjct: 364 KALELFERMRLEGLQPTIITFTSVLFACSHAGMLDQGRKHFVSFIGDHGIFPEAEHFGCM 423

Query: 556 VDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENV 615
           VD+LGRAG +  + + +  +  EP P  W A LGAC  +++ + A  A+E LF+LDP   
Sbjct: 424 VDLLGRAGWIVDSEDLLLHMPFEPHPVAWMAFLGACRTYRNMDGAIWAAENLFQLDPRKR 483

Query: 616 GYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQST 675
             +VLLSN+Y+    +   A +RQ ++     K  G + IEV    H F SGD  HP+  
Sbjct: 484 APYVLLSNMYAKAGRWSDVARMRQAMQLFMTVKEAGRSWIEVKDRVHEFISGDLDHPRIG 543

Query: 676 AIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEI 735
            I+A L++L   M+ AG+  +T   LHDV++E KE M+  HSEKLA+AF L+ T  G+ I
Sbjct: 544 EIHAELQRLTKLMKAAGYVPDTEMVLHDVKQEVKETMVGYHSEKLAMAFALLTTPEGSPI 603

Query: 736 RIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           R++KNLRVC DCHTA+KFISK+  R IVVRD NRFH F+ G CSCGDYW
Sbjct: 604 RVVKNLRVCNDCHTASKFISKLVNREIVVRDCNRFHRFQNGACSCGDYW 652



 Score =  155 bits (393), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 103/372 (27%), Positives = 178/372 (47%), Gaps = 4/372 (1%)

Query: 238 KLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLR 297
           +LG+  + ++   L+  Y+KC   + A  +F  I   ++ S   M++ +  N   +    
Sbjct: 3   ELGWIRNRFLCNLLIDLYTKCDRFDDALAVFHGIQSKNVFSWTMMLAAFAENRDFDRCWL 62

Query: 298 LFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYS 357
            FR +L          I   +        + +   I    L +GI   S V TAL ++Y 
Sbjct: 63  FFRGMLLQGINPGEVGISIFLSACTDAREITIGRSIQLAILGTGIEEESIVQTALVSLYG 122

Query: 358 RLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSS 417
           +L     A  +F   S + + +W+AM+A Y +NG   EA+ LF++M    VAPN VT+ S
Sbjct: 123 KLGHCTDAASVFLRMSHRDVVAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVS 182

Query: 418 ILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKS 477
            L ACA LG +  G  +H+ V+++  +S + V TAL+++Y KCG I  A E F  +  K+
Sbjct: 183 GLDACASLGDLRSGALMHQRVEAQGIQSGVVVGTALVNLYGKCGRIEAAAEAFGQIVEKN 242

Query: 478 EVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQ 537
            V W+ + + Y  +    +A+++   M   G+ P+  TF+SVL AC+    +++G  I +
Sbjct: 243 VVAWSAISAAYARNDRNRDAIRVLHRMDLEGLAPNSTTFVSVLDACAAIAALKQGRRIHE 302

Query: 538 SMIHDHGFKPLAEHY--ACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHK 595
             IH  G    ++ Y    +V++  + G L  A      +A      +W +L+     H 
Sbjct: 303 R-IHVLGGGLESDVYVLTALVNMYSKCGNLALAGNMFDKIA-HLDLVLWNSLIATNAQHG 360

Query: 596 DTNLARVASEKL 607
            T  A    E++
Sbjct: 361 QTEKALELFERM 372



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 107/414 (25%), Positives = 192/414 (46%), Gaps = 5/414 (1%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           A A+F  I   ++F + +++  F+ N        F+  +     + P     S  LSA +
Sbjct: 29  ALAVFHGIQSKNVFSWTMMLAAFAENRDFDRCWLFFRGMLLQ-GINPGEVGISIFLSACT 87

Query: 120 ACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNS 179
              + +IG  +    + +G   +  V  ALV LY K      A  VF +M  +D V W++
Sbjct: 88  DAREITIGRSIQLAILGTGIEEESIVQTALVSLYGKLGHCTDAASVFLRMSHRDVVAWSA 147

Query: 180 MISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKL 239
           M++   +N   ++++ +F  M  + G   +  ++ + L A A + +LR G  +       
Sbjct: 148 MVAAYARNGHPREALGLFRQMDLD-GVAPNKVTLVSGLDACASLGDLRSGALMHQRVEAQ 206

Query: 240 GFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLF 299
           G    V V T LV+ Y KCG +E A   F  IV  ++++ +A+ + Y  N +   ++R+ 
Sbjct: 207 GIQSGVVVGTALVNLYGKCGRIEAAAEAFGQIVEKNVVAWSAISAAYARNDRNRDAIRVL 266

Query: 300 RQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHS--FCLKSGIVSNSSVLTALSTVYS 357
            ++       NS+T V ++        L     IH     L  G+ S+  VLTAL  +YS
Sbjct: 267 HRMDLEGLAPNSTTFVSVLDACAAIAALKQGRRIHERIHVLGGGLESDVYVLTALVNMYS 326

Query: 358 RLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSS 417
           +   +  A  +FD+ +   L  WN++IA   Q+G TE+A+ LF+ M+   + P  +T +S
Sbjct: 327 KCGNLALAGNMFDKIAHLDLVLWNSLIATNAQHGQTEKALELFERMRLEGLQPTIITFTS 386

Query: 418 ILSACAQLGAISLG-KWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELF 470
           +L AC+  G +  G K     +              ++D+  + G IV++ +L 
Sbjct: 387 VLFACSHAGMLDQGRKHFVSFIGDHGIFPEAEHFGCMVDLLGRAGWIVDSEDLL 440



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 88/334 (26%), Positives = 153/334 (45%), Gaps = 15/334 (4%)

Query: 10  NLFLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPK 69
           ++FLS    A+  +        I+  G + +    T L            A ++F  +  
Sbjct: 80  SIFLSACTDAREITIGRSIQLAILGTGIEEESIVQTALVSLYGKLGHCTDAASVFLRMSH 139

Query: 70  PDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVL 129
            D+  ++ ++  ++ N  P+ ++  +  +  +  + P+  T    L A ++  D   G L
Sbjct: 140 RDVVAWSAMVAAYARNGHPREALGLFRQMDLD-GVAPNKVTLVSGLDACASLGDLRSGAL 198

Query: 130 LHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCC 189
           +H      G  S + VG ALV+LY K   +++A + F ++ EK+ V W+++ +   +N  
Sbjct: 199 MHQRVEAQGIQSGVVVGTALVNLYGKCGRIEAAAEAFGQIVEKNVVAWSAISAAYARNDR 258

Query: 190 FQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEI--QCLGLKLGFHDHVYV 247
            +D+I V   M   G    +ST+  +VL A A +  L+ G  I  +   L  G    VYV
Sbjct: 259 NRDAIRVLHRMDLEGLA-PNSTTFVSVLDACAAIAALKQGRRIHERIHVLGGGLESDVYV 317

Query: 248 LTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAE 307
           LT LV+ YSKCG +  A  +F  I   DL+  N++I+    +G+TE +L LF ++     
Sbjct: 318 LTALVNMYSKCGNLALAGNMFDKIAHLDLVLWNSLIATNAQHGQTEKALELFERM----- 372

Query: 308 RVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSG 341
                 + GL P    F  + L  C H+  L  G
Sbjct: 373 -----RLEGLQPTIITFTSV-LFACSHAGMLDQG 400


>gi|449453226|ref|XP_004144359.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
           mitochondrial-like [Cucumis sativus]
          Length = 785

 Score =  466 bits (1198), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 263/750 (35%), Positives = 422/750 (56%), Gaps = 64/750 (8%)

Query: 39  NDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHL 98
           N + +   L  R S       AR +F  +   ++  +N I+ G+  N+ P+ +   +  +
Sbjct: 96  NFIISRNSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQNKRPQEAQNMFDKM 155

Query: 99  RKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSW 158
            +   ++                           + +VSGY ++                
Sbjct: 156 SERNTIS--------------------------WNGLVSGYINN--------------GM 175

Query: 159 VKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMV-RNGGTWLDSTSVAAVL 217
           +  AR+VFD+MPE++ V W +M+ G +K     ++  +F  M  +N  +W  +  +  +L
Sbjct: 176 INEAREVFDRMPERNVVSWTAMVRGYVKEGMISEAETLFWQMPEKNVVSW--TVMLGGLL 233

Query: 218 PAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLI 277
                 QE R+  +  C    +     V   T ++  Y + G +  A +LF ++ R +++
Sbjct: 234 ------QEGRI--DEACRLFDMMPEKDVVTRTNMIGGYCQVGRLVEARMLFDEMPRRNVV 285

Query: 278 SCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHL-HLTNCIHSF 336
           S   MI+GY  N + + + +LF  +       N  +   ++  +   G L   +   ++ 
Sbjct: 286 SWTTMITGYVQNQQVDIARKLFEVMPEK----NEVSWTAMLKGYTNCGRLDEASELFNAM 341

Query: 337 CLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEA 396
            +KS +  N+ +L      + +  E+  AR++FD+  EK   +W+AMI  Y + GL  +A
Sbjct: 342 PIKSVVACNAMILC-----FGQNGEVPKARQVFDQMREKDEGTWSAMIKVYERKGLELDA 396

Query: 397 ISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVH-ELVKSRNFESNIYVSTALID 455
           + LF+ MQ   + PN  ++ S+LS CA L  +  G+ +H +LV+S+ F+ ++YV++ L+ 
Sbjct: 397 LELFRMMQREGIRPNFPSLISVLSVCAGLANLDHGREIHAQLVRSQ-FDLDVYVASVLLS 455

Query: 456 MYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVT 515
           MY KCGN+ +A+++FD  + K  V WN++I+GY  HG G+EAL++F +M  SGI P  VT
Sbjct: 456 MYIKCGNLAKAKQVFDRFAVKDVVMWNSIITGYAQHGLGVEALRVFHDMHFSGIMPDDVT 515

Query: 516 FLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGL 575
           F+ VL ACS+ G V++G EIF SM   +  +   EHYACMVD+LGRAG+L +A++ I+ +
Sbjct: 516 FVGVLSACSYTGNVKKGLEIFNSMETKYQVEQKIEHYACMVDLLGRAGKLNEAMDLIEKM 575

Query: 576 AVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAA 635
            +E    +WGALLGAC  H   +LA VA++KL  L+P+N G  +LLSNIY+++  +   A
Sbjct: 576 PMEADAIIWGALLGACRTHMKLDLAEVAAKKLLVLEPKNAGPFILLSNIYASQGRWDDVA 635

Query: 636 TVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQL-HPQSTAIYAMLEKLNGKMREAGFQ 694
            +R+ ++ R+++K PGC+ I V    H FT GD   HP+ + I  +LE L+G +REAG+ 
Sbjct: 636 ELRRNMRDRRVSKYPGCSWIVVEKKVHKFTGGDSSGHPEHSEINRILEWLSGLLREAGYY 695

Query: 695 TETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFI 754
            +    LHDV+EEEK   ++ HSEKLA+A+GL+    G  IR++KNLRVC DCH A K I
Sbjct: 696 PDQSFVLHDVDEEEKVQSLEYHSEKLAVAYGLLKIPIGMPIRVMKNLRVCGDCHAAIKLI 755

Query: 755 SKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           +KVTGR I++RDANRFHHFK G CSC DYW
Sbjct: 756 AKVTGREIILRDANRFHHFKDGSCSCRDYW 785



 Score = 93.2 bits (230), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 78/312 (25%), Positives = 133/312 (42%), Gaps = 72/312 (23%)

Query: 333 IHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGL 392
           ++ F   + I+S +S++T     YSRL ++E AR +FDE  +K++ SWN+++AGY QN  
Sbjct: 89  LNRFYCSNFIISRNSLITR----YSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQNKR 144

Query: 393 TEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNF--------- 443
            +EA ++F +M       N ++ + ++S     G I+  + V + +  RN          
Sbjct: 145 PQEAQNMFDKMSER----NTISWNGLVSGYINNGMINEAREVFDRMPERNVVSWTAMVRG 200

Query: 444 ------------------ESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMI 485
                             E N+   T ++    + G I EA  LFD+M  K  VT   MI
Sbjct: 201 YVKEGMISEAETLFWQMPEKNVVSWTVMLGGLLQEGRIDEACRLFDMMPEKDVVTRTNMI 260

Query: 486 SGYGLHGHGLEALQLFSEMLHSGI---------------------------RPSGVTFLS 518
            GY   G  +EA  LF EM    +                             + V++ +
Sbjct: 261 GGYCQVGRLVEARMLFDEMPRRNVVSWTTMITGYVQNQQVDIARKLFEVMPEKNEVSWTA 320

Query: 519 VLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYAC--MVDILGRAGQLEKALEFIKGLA 576
           +L   ++ G + E  E+F +M       P+    AC  M+   G+ G++ KA +    + 
Sbjct: 321 MLKGYTNCGRLDEASELFNAM-------PIKSVVACNAMILCFGQNGEVPKARQVFDQMR 373

Query: 577 VEPGPAVWGALL 588
            E     W A++
Sbjct: 374 -EKDEGTWSAMI 384


>gi|125588087|gb|EAZ28751.1| hypothetical protein OsJ_12773 [Oryza sativa Japonica Group]
          Length = 698

 Score =  466 bits (1198), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 259/699 (37%), Positives = 380/699 (54%), Gaps = 67/699 (9%)

Query: 152 LYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDST 211
           ++ K   +  AR VF +MPE+D V W  M+ GL +   F ++I    DM  +G T    T
Sbjct: 1   MFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQFT 60

Query: 212 SVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLF-RD 270
            +  VL + A  Q   +G ++    +KLG    V V   +++ Y KCG+ E A  +F R 
Sbjct: 61  -LTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTVFERM 119

Query: 271 IVR----------------------------PD--LISCNAMISGYTCNGKTESSLRLFR 300
            VR                            PD  ++S NAMI+GY  NG    +L+LF 
Sbjct: 120 PVRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLFS 179

Query: 301 QLL-ASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRL 359
           ++L  S+   +  TI  ++      G++ +   +H++ L++ +  NS V  AL + Y++ 
Sbjct: 180 RMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKS 239

Query: 360 NEMEAARKLFDESSE---------------------------------KSLASWNAMIAG 386
             +E AR++ D+S E                                 + + +W AMI G
Sbjct: 240 GSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVG 299

Query: 387 YTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESN 446
           Y QNG  +EAI LF+ M      PN  T++++LS CA L  +  GK +H        E +
Sbjct: 300 YEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLEQS 359

Query: 447 IYVSTALIDMYAKCGNIVEARELFDLMSHKSE-VTWNTMISGYGLHGHGLEALQLFSEML 505
             VS A+I MYA+ G+   AR +FD +  + E +TW +MI     HG G EA+ LF EML
Sbjct: 360 SSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEML 419

Query: 506 HSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQL 565
            +G+ P  +T++ VL ACSHAG V EG   +  + ++H   P   HYACMVD+L RAG  
Sbjct: 420 RAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGLF 479

Query: 566 EKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIY 625
            +A EFI+ + VEP    WG+LL AC +HK+  LA +A+EKL  +DP N G +  ++N+Y
Sbjct: 480 SEAQEFIRRMPVEPDAIAWGSLLSACRVHKNAELAELAAEKLLSIDPNNSGAYSAIANVY 539

Query: 626 SAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLN 685
           SA   +  AA + +  K++ + K  G +   +    HVF + D +HPQ  A+YAM  ++ 
Sbjct: 540 SACGRWSDAARIWKARKEKAVRKETGFSWTHIRSKIHVFGADDVVHPQRDAVYAMAARMW 599

Query: 686 GKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCL 745
            +++ AGF  +  + LHDV++E KE ++  HSEKLAIAFGLI+T   T +R++KNLRVC 
Sbjct: 600 EEIKGAGFVPDLQSVLHDVDDELKEELLSRHSEKLAIAFGLISTPEKTTLRVMKNLRVCN 659

Query: 746 DCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           DCH A K ISKVT R I+VRDA RFHHF+ G+CSC DYW
Sbjct: 660 DCHAAIKAISKVTDREIIVRDATRFHHFRDGLCSCKDYW 698



 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 130/530 (24%), Positives = 235/530 (44%), Gaps = 76/530 (14%)

Query: 50  RLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNF 109
           RL+D      AR +F  +P+ D   + V++ G +       +I     +  +   TP  F
Sbjct: 7   RLAD------ARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTAD-GFTPTQF 59

Query: 110 TYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFK-------------- 155
           T + VLS+ +     ++G  +H   +  G GS + V  +++++Y K              
Sbjct: 60  TLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTVFERM 119

Query: 156 -----FSW------------VKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFG 198
                 SW            +  A  +F+ MP++  V WN+MI+G  +N     ++ +F 
Sbjct: 120 PVRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLFS 179

Query: 199 DMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKC 258
            M+       D  ++ +VL A A +  +R+G ++    L+     +  V   L+S Y+K 
Sbjct: 180 RMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKS 239

Query: 259 GEVERAELLFRDIVRPDL---------------------------------ISCNAMISG 285
           G VE A  +    +  DL                                 ++  AMI G
Sbjct: 240 GSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVG 299

Query: 286 YTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSN 345
           Y  NG+ + ++ LFR ++      NS T+  ++ V      L     IH   ++S +  +
Sbjct: 300 YEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLEQS 359

Query: 346 SSVLTALSTVYSRLNEMEAARKLFDESS-EKSLASWNAMIAGYTQNGLTEEAISLFQEMQ 404
           SSV  A+ T+Y+R      AR++FD+    K   +W +MI    Q+G  EEA+ LF+EM 
Sbjct: 360 SSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEML 419

Query: 405 ASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRN-FESNIYVSTALIDMYAKCGNI 463
            + V P+ +T   +LSAC+  G ++ GK  ++ +K+ +     +     ++D+ A+ G  
Sbjct: 420 RAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGLF 479

Query: 464 VEARELFDLMSHKSE-VTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPS 512
            EA+E    M  + + + W +++S   +H +  E  +L +E L S I P+
Sbjct: 480 SEAQEFIRRMPVEPDAIAWGSLLSACRVHKNA-ELAELAAEKLLS-IDPN 527



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 104/453 (22%), Positives = 196/453 (43%), Gaps = 71/453 (15%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           A +LF S+P   +  +N +I G++ N +   ++  ++ +   +++ PD FT + VLSA +
Sbjct: 143 AESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACA 202

Query: 120 ACCDRSIGVLLHGH--------------AIVSGYG-----------------SDLFVGA- 147
              +  IG  +H +              A++S Y                  +DL V + 
Sbjct: 203 NLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQSMETDLNVISF 262

Query: 148 -ALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGT 206
            AL++ Y K   ++SAR++F  M  +D V W +MI G  +N    ++I +F  M+  G  
Sbjct: 263 TALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPE 322

Query: 207 WLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAEL 266
             +S ++AAVL   A +  L  G +I C  ++        V   +++ Y++ G    A  
Sbjct: 323 -PNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLEQSSSVSNAIITMYARSGSFPWARR 381

Query: 267 LFRDIV-RPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFG 325
           +F  +  R + I+  +MI     +G+ E ++ LF ++L +    +  T VG+        
Sbjct: 382 MFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDRITYVGV-------- 433

Query: 326 HLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRL-NEMEAARKLFDESSEKSLASWNAMI 384
              L+ C H+  +  G              Y ++ NE + A           ++ +  M+
Sbjct: 434 ---LSACSHAGFVNEG-----------KRYYDQIKNEHQIA---------PEMSHYACMV 470

Query: 385 AGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFE 444
               + GL  EA    + M    V P+ +   S+LSAC       L +   E + S +  
Sbjct: 471 DLLARAGLFSEAQEFIRRM---PVEPDAIAWGSLLSACRVHKNAELAELAAEKLLSID-P 526

Query: 445 SNIYVSTALIDMYAKCGNIVEARELFDLMSHKS 477
           +N    +A+ ++Y+ CG   +A  ++     K+
Sbjct: 527 NNSGAYSAIANVYSACGRWSDAARIWKARKEKA 559


>gi|357477865|ref|XP_003609218.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355510273|gb|AES91415.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1134

 Score =  466 bits (1198), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 274/772 (35%), Positives = 429/772 (55%), Gaps = 19/772 (2%)

Query: 25   LTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSN 84
            L Q   +I   GF  DL   + L +  + +     A+ +F  +   +    N ++ G + 
Sbjct: 370  LEQMLTRIEKSGFLRDLYVGSALVNGFARYGLMDCAKMIFKQMYDRNAVTMNGLMVGLAR 429

Query: 85   NEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCD----RSIGVLLHGHAIVSGY- 139
                + +   +  ++    +  ++     +LS  +   +    +  G  +H +   SG  
Sbjct: 430  QHQGEEAAKVFKEMKDLVEINSESLV--VLLSTFTEFSNLKEGKRKGQEVHAYLFRSGLV 487

Query: 140  GSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGD 199
             + + +G ALV++Y K + + +A  VF  MP KDTV WNSMISGL  N  F++++  F  
Sbjct: 488  DARISIGNALVNMYGKCTAIDNACSVFQLMPSKDTVSWNSMISGLDHNERFEEAVSCFHT 547

Query: 200  MVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCG 259
            M RNG     + SV + L + + +  L LG +I   G K G    V V   L++ Y++  
Sbjct: 548  MKRNGMV-PSNFSVISTLSSCSSLGWLTLGRQIHGEGFKWGLDLDVSVSNALLTLYAETD 606

Query: 260  EVERAELLFRDIVRPDLISCNAMISGYTCNGKTESS----LRLFRQLLASAERVNSSTIV 315
             +   + +F  +   D +S N+ I       K E+S    L+ F +++ +  R N  T +
Sbjct: 607  SINECQKVFFQMPEYDQVSWNSFIGAL---AKYEASVLQALKYFLEMMQAGWRPNRVTFI 663

Query: 316  GLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEK 375
             ++     F  L L + IH+  LK  +  ++++  AL   Y +  +ME    +F   SE+
Sbjct: 664  NILAAVSSFSVLGLGHQIHALILKYSVADDNAIENALLAFYGKCEQMEDCEIIFSRMSER 723

Query: 376  -SLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWV 434
                SWN+MI+GY  +G+  +A+ L   M       +  T +++LSACA +  +  G  V
Sbjct: 724  RDEVSWNSMISGYLHSGILHKAMDLVWPMMQRGQKLDGFTFATVLSACASVATLERGMEV 783

Query: 435  HELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHG 494
            H        ES++ V +AL+DMYAKCG I  A   F+LM  ++  +WN+MISGY  HGHG
Sbjct: 784  HACAVRACLESDVVVGSALVDMYAKCGKIDYASRFFELMPVRNIYSWNSMISGYARHGHG 843

Query: 495  LEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYAC 554
             +AL++F+ M   G  P  VTF+ VL ACSH GLV EG + F+SM   +G  P  EH++C
Sbjct: 844  QKALKIFTRMKQHGQSPDHVTFVGVLSACSHVGLVDEGYKHFKSMGEVYGLSPRIEHFSC 903

Query: 555  MVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIH--KDTNLARVASEKLFELDP 612
            MVD+LGRAG ++K  +FIK + ++P   +W  +LGAC     ++T L + A++ L EL+P
Sbjct: 904  MVDLLGRAGDVKKIEDFIKTMPMDPNILIWRTVLGACCRANGRNTELGQRAAKMLIELEP 963

Query: 613  ENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHP 672
            +N   +VLLSN+++A  ++      R  ++K  + K  GC+ + +    H+F +GDQ HP
Sbjct: 964  QNAVNYVLLSNMHAAGGNWEDVVEARLAMRKAAVKKDAGCSWVNMKDGVHLFVAGDQTHP 1023

Query: 673  QSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPG 732
            +   IY  L++L  K+R+AG+  ET  AL+D+E E KE ++  HSEKLAIAF ++  +  
Sbjct: 1024 EKEKIYEKLKELMNKIRDAGYVPETKYALYDLELENKEELLSYHSEKLAIAF-VLTRKSE 1082

Query: 733  TEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
              IRI+KNLRVC DCHTA K+ISK+ GR I++RD+NRFHHF GG+CSCGDYW
Sbjct: 1083 LPIRIMKNLRVCGDCHTAFKYISKIVGRQIILRDSNRFHHFGGGMCSCGDYW 1134



 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 123/431 (28%), Positives = 213/431 (49%), Gaps = 21/431 (4%)

Query: 130 LHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCC 189
           LH     +G+  D+F    L+++Y +   + SARK+FD+MP+K+ V W+ +ISG  +N  
Sbjct: 162 LHLQLYKTGFTDDVFFCNTLINIYVRIGNLVSARKLFDEMPQKNLVSWSCLISGYTQNRM 221

Query: 190 FQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQE--LRLGMEIQCLGLKLGFHDHVYV 247
             ++  +F  ++ + G   +  +V + L A  +     ++LGM+I     KL     + +
Sbjct: 222 PDEACSLFKGVI-SSGLLPNHFAVGSALRACQQCGSTGIKLGMQIHAFICKLPCVSDMIL 280

Query: 248 LTGLVSFYSKC-GEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQL-LAS 305
              L+S YS C G ++ A  +F +I   + ++ N++IS Y   G   S+ +LF  + +  
Sbjct: 281 SNVLMSMYSDCSGSIDDAHRVFDEIKFRNSVTWNSIISVYCRRGDAVSAFKLFSVMQMEG 340

Query: 306 AE---RVNSSTIVGLIPVFYPFGH--LHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLN 360
            E   R N  T+  L+          L L   + +   KSG + +  V +AL   ++R  
Sbjct: 341 VELNLRPNEYTLCSLVTAACSLADCGLVLLEQMLTRIEKSGFLRDLYVGSALVNGFARYG 400

Query: 361 EMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILS 420
            M+ A+ +F +  +++  + N ++ G  +    EEA  +F+EM+   V  N  ++  +LS
Sbjct: 401 LMDCAKMIFKQMYDRNAVTMNGLMVGLARQHQGEEAAKVFKEMK-DLVEINSESLVVLLS 459

Query: 421 ACAQLGAISLGKW----VHE-LVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSH 475
              +   +  GK     VH  L +S   ++ I +  AL++MY KC  I  A  +F LM  
Sbjct: 460 TFTEFSNLKEGKRKGQEVHAYLFRSGLVDARISIGNALVNMYGKCTAIDNACSVFQLMPS 519

Query: 476 KSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEI 535
           K  V+WN+MISG   +    EA+  F  M  +G+ PS  + +S L +CS  G +  G + 
Sbjct: 520 KDTVSWNSMISGLDHNERFEEAVSCFHTMKRNGMVPSNFSVISTLSSCSSLGWLTLGRQ- 578

Query: 536 FQSMIHDHGFK 546
               IH  GFK
Sbjct: 579 ----IHGEGFK 585



 Score =  136 bits (342), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 107/331 (32%), Positives = 166/331 (50%), Gaps = 30/331 (9%)

Query: 299 FRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSR 358
            +QL +  +R  +S+        Y   HLHL         K+G   +      L  +Y R
Sbjct: 140 LQQLDSEFDRYKTSS------SLYDANHLHLQ------LYKTGFTDDVFFCNTLINIYVR 187

Query: 359 LNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSI 418
           +  + +ARKLFDE  +K+L SW+ +I+GYTQN + +EA SLF+ + +S + PN   V S 
Sbjct: 188 IGNLVSARKLFDEMPQKNLVSWSCLISGYTQNRMPDEACSLFKGVISSGLLPNHFAVGSA 247

Query: 419 LSACAQLGA--ISLGKWVHELVKSRNFESNIYVSTALIDMYAKC-GNIVEARELFDLMSH 475
           L AC Q G+  I LG  +H  +      S++ +S  L+ MY+ C G+I +A  +FD +  
Sbjct: 248 LRACQQCGSTGIKLGMQIHAFICKLPCVSDMILSNVLMSMYSDCSGSIDDAHRVFDEIKF 307

Query: 476 KSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGI----RPSGVTFLS-VLYACSHA--GL 528
           ++ VTWN++IS Y   G  + A +LFS M   G+    RP+  T  S V  ACS A  GL
Sbjct: 308 RNSVTWNSIISVYCRRGDAVSAFKLFSVMQMEGVELNLRPNEYTLCSLVTAACSLADCGL 367

Query: 529 VREGDEIFQSMIHDHGFKPLAEHY--ACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGA 586
           V    E   + I   GF  L + Y  + +V+   R G ++ A    K +       + G 
Sbjct: 368 VLL--EQMLTRIEKSGF--LRDLYVGSALVNGFARYGLMDCAKMIFKQMYDRNAVTMNGL 423

Query: 587 LLGACMIHKDTNLARVASE--KLFELDPENV 615
           ++G    H+    A+V  E   L E++ E++
Sbjct: 424 MVGLARQHQGEEAAKVFKEMKDLVEINSESL 454


>gi|449488311|ref|XP_004157997.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
           mitochondrial-like [Cucumis sativus]
          Length = 785

 Score =  466 bits (1198), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 263/750 (35%), Positives = 422/750 (56%), Gaps = 64/750 (8%)

Query: 39  NDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHL 98
           N + +   L  R S       AR +F  +   ++  +N I+ G+  N+ P+ +   +  +
Sbjct: 96  NFIISRNSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQNKRPQEAQNMFDKM 155

Query: 99  RKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSW 158
            +   ++                           + +VSGY ++                
Sbjct: 156 SERNTIS--------------------------WNGLVSGYINN--------------GM 175

Query: 159 VKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMV-RNGGTWLDSTSVAAVL 217
           +  AR+VFD+MPE++ V W +M+ G +K     ++  +F  M  +N  +W  +  +  +L
Sbjct: 176 INEAREVFDRMPERNVVSWTAMVRGYVKEGMISEAETLFWQMPEKNVVSW--TVMLGGLL 233

Query: 218 PAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLI 277
                 QE R+  +  C    +     V   T ++  Y + G +  A +LF ++ R +++
Sbjct: 234 ------QEGRI--DEACRLFDMMPEKDVVTRTNMIGGYCQVGRLVEARMLFDEMPRRNVV 285

Query: 278 SCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHL-HLTNCIHSF 336
           S   MI+GY  N + + + +LF  +       N  +   ++  +   G L   +   ++ 
Sbjct: 286 SWTTMITGYVQNQQVDIARKLFEVMPEK----NEVSWTAMLKGYTNCGRLDEASELFNAM 341

Query: 337 CLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEA 396
            +KS +  N+ +L      + +  E+  AR++FD+  EK   +W+AMI  Y + GL  +A
Sbjct: 342 PIKSVVACNAMILC-----FGQNGEVPKARQVFDQMREKDEGTWSAMIKVYERKGLELDA 396

Query: 397 ISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVH-ELVKSRNFESNIYVSTALID 455
           + LF+ MQ   + PN  ++ S+LS CA L  +  G+ +H +LV+S+ F+ ++YV++ L+ 
Sbjct: 397 LELFRMMQREGIRPNFPSLISVLSVCAGLANLDHGREIHAQLVRSQ-FDLDVYVASVLLS 455

Query: 456 MYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVT 515
           MY KCGN+ +A+++FD  + K  V WN++I+GY  HG G+EAL++F +M  SGI P  VT
Sbjct: 456 MYIKCGNLAKAKQVFDRFAVKDVVMWNSIITGYAQHGLGVEALRVFHDMHFSGIMPDDVT 515

Query: 516 FLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGL 575
           F+ VL ACS+ G V++G EIF SM   +  +   EHYACMVD+LGRAG+L +A++ I+ +
Sbjct: 516 FVGVLSACSYTGNVKKGLEIFNSMETKYQVEQKIEHYACMVDLLGRAGKLNEAMDLIEKM 575

Query: 576 AVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAA 635
            +E    +WGALLGAC  H   +LA VA++KL  L+P+N G  +LLSNIY+++  +   A
Sbjct: 576 PMEADAIIWGALLGACRTHMKLDLAEVAAKKLLVLEPKNAGPFILLSNIYASQGRWDDVA 635

Query: 636 TVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQL-HPQSTAIYAMLEKLNGKMREAGFQ 694
            +R+ ++ R+++K PGC+ I V    H FT GD   HP+ + I  +LE L+G +REAG+ 
Sbjct: 636 ELRRNMRDRRVSKYPGCSWIVVEKKVHKFTGGDSSGHPEHSEINRILEWLSGLLREAGYY 695

Query: 695 TETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFI 754
            +    LHDV+EEEK   ++ HSEKLA+A+GL+    G  IR++KNLRVC DCH A K I
Sbjct: 696 PDQSFVLHDVDEEEKVQSLEYHSEKLAVAYGLLKIPIGMPIRVMKNLRVCGDCHAAIKLI 755

Query: 755 SKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           +KVTGR I++RDANRFHHFK G CSC DYW
Sbjct: 756 AKVTGREIILRDANRFHHFKDGSCSCRDYW 785



 Score = 92.8 bits (229), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 78/312 (25%), Positives = 133/312 (42%), Gaps = 72/312 (23%)

Query: 333 IHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGL 392
           ++ F   + I+S +S++T     YSRL ++E AR +FDE  +K++ SWN+++AGY QN  
Sbjct: 89  LNRFYCSNFIISRNSLITR----YSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQNKR 144

Query: 393 TEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNF--------- 443
            +EA ++F +M       N ++ + ++S     G I+  + V + +  RN          
Sbjct: 145 PQEAQNMFDKMSER----NTISWNGLVSGYINNGMINEAREVFDRMPERNVVSWTAMVRG 200

Query: 444 ------------------ESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMI 485
                             E N+   T ++    + G I EA  LFD+M  K  VT   MI
Sbjct: 201 YVKEGMISEAETLFWQMPEKNVVSWTVMLGGLLQEGRIDEACRLFDMMPEKDVVTRTNMI 260

Query: 486 SGYGLHGHGLEALQLFSEMLHSGI---------------------------RPSGVTFLS 518
            GY   G  +EA  LF EM    +                             + V++ +
Sbjct: 261 GGYCQVGRLVEARMLFDEMPRRNVVSWTTMITGYVQNQQVDIARKLFEVMPEKNEVSWTA 320

Query: 519 VLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYAC--MVDILGRAGQLEKALEFIKGLA 576
           +L   ++ G + E  E+F +M       P+    AC  M+   G+ G++ KA +    + 
Sbjct: 321 MLKGYTNCGRLDEASELFNAM-------PIKSVVACNAMILCFGQNGEVPKARQVFDQMR 373

Query: 577 VEPGPAVWGALL 588
            E     W A++
Sbjct: 374 -EKDEGTWSAMI 384


>gi|347954538|gb|AEP33769.1| organelle transcript processing 82, partial [Olimarabidopsis
           pumila]
          Length = 710

 Score =  466 bits (1198), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 256/692 (36%), Positives = 391/692 (56%), Gaps = 37/692 (5%)

Query: 129 LLHGHAIVSGYGSDLFVGAALVD---LYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLM 185
           ++H   I +G  +  +  + L++   L   F  +  A  VFD + E   ++WN+M  G  
Sbjct: 20  IIHAQMIKTGLHNTNYALSKLLEXCVLSPHFDGLPYAISVFDTIQEPXLLIWNTMFRGHA 79

Query: 186 KNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHV 245
            +     ++ ++  MV + G   +S +   +L + A+    + G ++    LK GF   +
Sbjct: 80  LSSDPVSALKLYVCMV-SLGLLPNSYTFPFLLKSCAKSXAFKEGQQLHGQVLKFGFDLDL 138

Query: 246 YVLTGLVSFYSKCGEVERAEL-------------------------------LFRDIVRP 274
           Y+ T L+S Y + G +E A+                                +F +I   
Sbjct: 139 YIHTSLISMYVQNGRLEDAQKVXDKSSHRDVVSYTALITGYASRGXIESAHKMFDEIPVK 198

Query: 275 DLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIH 334
           D++S NA ISGY   G  + +L LF++++ +  R + ST+V ++      G + L   +H
Sbjct: 199 DVVSWNAXISGYAETGNYKEALELFKKMMKTNVRPDESTMVTVLSACAQSGSIELGRQVH 258

Query: 335 SFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTE 394
           S+    G   N  ++ AL  +YS+  E+E A  LF   S K + SWN +I GYT   L +
Sbjct: 259 SWINDHGFGXNLKIVNALIDLYSKCGELETACGLFQGLSNKDVISWNTLIGGYTHMNLYK 318

Query: 395 EAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSR--NFESNIYVSTA 452
           EA+ LFQ+M  S   PN VT+ SILSACA LGAI +G+W+H  +  R     +   + T+
Sbjct: 319 EALLLFQDMLRSGEKPNDVTMLSILSACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTS 378

Query: 453 LIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPS 512
           LIDMYAKCG+I  A+++FD M ++S  +WN MI G+ +HG    A  +FS M  +GI P 
Sbjct: 379 LIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNGIEPD 438

Query: 513 GVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFI 572
            +TF+ +L ACSH+G++  G  IF+SM  D+   P  EHY CM+D+ G +G  ++A + I
Sbjct: 439 DITFVGLLSACSHSGMLDLGRHIFRSMTRDYKLMPKLEHYGCMIDLXGHSGLFKEAEKMI 498

Query: 573 KGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYL 632
             + +EP   +W +LL AC +H +  L    ++ L +++PEN G +VLLSNIY+    + 
Sbjct: 499 NTMEMEPDGVIWCSLLKACKMHGNVELGESYAQNLIKIEPENPGSYVLLSNIYATAERWN 558

Query: 633 QAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAG 692
           + A  R ++  + + K PGC+ IE+    H F  GD+ HP++  IY MLE++   + EAG
Sbjct: 559 EVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEEAG 618

Query: 693 FQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATK 752
           F  +T   L ++EEE KE  ++ HSEKLAIAFGLI+T+PGT++ I+KNLRVC +CH ATK
Sbjct: 619 FVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATK 678

Query: 753 FISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
            ISK+  R I+ RD  RFHHF+ G CSC DYW
Sbjct: 679 LISKIYKREIIARDRTRFHHFRDGECSCNDYW 710



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 141/519 (27%), Positives = 258/519 (49%), Gaps = 40/519 (7%)

Query: 13  LSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRL---SDFKATCYARALFFSIPK 69
           LSLL   KT   L   HAQ+I  G  N    ++KL         F    YA ++F +I +
Sbjct: 6   LSLLHXCKTLQSLRIIHAQMIKTGLHNTNYALSKLLEXCVLSPHFDGLPYAISVFDTIQE 65

Query: 70  PDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVL 129
           P L ++N + RG + +  P S++  Y  +  +  L P+++T+ F+L + +       G  
Sbjct: 66  PXLLIWNTMFRGHALSSDPVSALKLYVCM-VSLGLLPNSYTFPFLLKSCAKSXAFKEGQQ 124

Query: 130 LHGHAIVSGYGSDLFVGAALVDLYFK-------------------------------FSW 158
           LHG  +  G+  DL++  +L+ +Y +                                  
Sbjct: 125 LHGQVLKFGFDLDLYIHTSLISMYVQNGRLEDAQKVXDKSSHRDVVSYTALITGYASRGX 184

Query: 159 VKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLP 218
           ++SA K+FD++P KD V WN+ ISG  +   +++++ +F  M++      D +++  VL 
Sbjct: 185 IESAHKMFDEIPVKDVVSWNAXISGYAETGNYKEALELFKKMMKT-NVRPDESTMVTVLS 243

Query: 219 AVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLIS 278
           A A+   + LG ++       GF  ++ ++  L+  YSKCGE+E A  LF+ +   D+IS
Sbjct: 244 ACAQSGSIELGRQVHSWINDHGFGXNLKIVNALIDLYSKCGELETACGLFQGLSNKDVIS 303

Query: 279 CNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCL 338
            N +I GYT     + +L LF+ +L S E+ N  T++ ++      G + +   IH +  
Sbjct: 304 WNTLIGGYTHMNLYKEALLLFQDMLRSGEKPNDVTMLSILSACAHLGAIDIGRWIHVYID 363

Query: 339 K--SGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEA 396
           K   G+ + SS+ T+L  +Y++  ++EAA+++FD    +SL+SWNAMI G+  +G    A
Sbjct: 364 KRLKGVTNASSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANAA 423

Query: 397 ISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWV-HELVKSRNFESNIYVSTALID 455
             +F  M+ + + P+ +T   +LSAC+  G + LG+ +   + +       +     +ID
Sbjct: 424 FDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTRDYKLMPKLEHYGCMID 483

Query: 456 MYAKCGNIVEARELFDLMSHKSE-VTWNTMISGYGLHGH 493
           +    G   EA ++ + M  + + V W +++    +HG+
Sbjct: 484 LXGHSGLFKEAEKMINTMEMEPDGVIWCSLLKACKMHGN 522



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 106/410 (25%), Positives = 187/410 (45%), Gaps = 45/410 (10%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           A  +F  IP  D+  +N  I G++     K ++  +  + K T + PD  T   VLSA +
Sbjct: 188 AHKMFDEIPVKDVVSWNAXISGYAETGNYKEALELFKKMMK-TNVRPDESTMVTVLSACA 246

Query: 120 ACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNS 179
                 +G  +H      G+G +L +  AL+DLY K   +++A  +F  +  KD + WN+
Sbjct: 247 QSGSIELGRQVHSWINDHGFGXNLKIVNALIDLYSKCGELETACGLFQGLSNKDVISWNT 306

Query: 180 MISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKL 239
           +I G      +++++ +F DM+R+G    D T + ++L A A +  + +G  I     K 
Sbjct: 307 LIGGYTHMNLYKEALLLFQDMLRSGEKPNDVT-MLSILSACAHLGAIDIGRWIHVYIDKR 365

Query: 240 --GFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLR 297
             G  +   + T L+  Y+KCG++E A+ +F  ++   L S NAMI G+  +G+  ++  
Sbjct: 366 LKGVTNASSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANAAFD 425

Query: 298 LFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYS 357
           +F ++  +    +  T VGL           L+ C HS  L  G      +  +++  Y 
Sbjct: 426 IFSRMRKNGIEPDDITFVGL-----------LSACSHSGMLDLG----RHIFRSMTRDYK 470

Query: 358 RLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSS 417
            + ++E                +  MI     +GL +EA  +   M+   + P+ V   S
Sbjct: 471 LMPKLE---------------HYGCMIDLXGHSGLFKEAEKMINTME---MEPDGVIWCS 512

Query: 418 ILSACAQLGAISLGK-WVHELVK-------SRNFESNIYVSTALIDMYAK 459
           +L AC   G + LG+ +   L+K       S    SNIY +    +  AK
Sbjct: 513 LLKACKMHGNVELGESYAQNLIKIEPENPGSYVLLSNIYATAERWNEVAK 562


>gi|356511265|ref|XP_003524347.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Glycine max]
          Length = 750

 Score =  465 bits (1197), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 253/668 (37%), Positives = 374/668 (55%), Gaps = 36/668 (5%)

Query: 142 DLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMV 201
           DLF    ++  Y +   ++ AR +FD MPEKD V WN+M+SG +++    ++  VF  M 
Sbjct: 94  DLFSWNLMLTGYARNRRLRDARMLFDSMPEKDVVSWNAMLSGYVRSGHVDEARDVFDRMP 153

Query: 202 -RNGGTWLDSTSVAAVLPAVAEVQELRLGME-------IQC------------LGLKLGF 241
            +N  +W     + A       ++E R   E       I C            LG     
Sbjct: 154 HKNSISW---NGLLAAYVRSGRLEEARRLFESKSDWELISCNCLMGGYVKRNMLGDARQL 210

Query: 242 HDHVYV-----LTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSL 296
            D + V        ++S Y++ G++ +A  LF +    D+ +  AM+  Y  +G  + + 
Sbjct: 211 FDQIPVRDLISWNTMISGYAQDGDLSQARRLFEESPVRDVFTWTAMVYAYVQDGMLDEAR 270

Query: 297 RLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVY 356
           R+F ++    E   +  I G    +  +  + +   +     +     N      + + Y
Sbjct: 271 RVFDEMPQKREMSYNVMIAG----YAQYKRMDMGREL----FEEMPFPNIGSWNIMISGY 322

Query: 357 SRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVS 416
            +  ++  AR LFD   ++   SW A+IAGY QNGL EEA+++  EM+    + N  T  
Sbjct: 323 CQNGDLAQARNLFDMMPQRDSVSWAAIIAGYAQNGLYEEAMNMLVEMKRDGESLNRSTFC 382

Query: 417 SILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHK 476
             LSACA + A+ LGK VH  V    +E    V  AL+ MY KCG I EA ++F  + HK
Sbjct: 383 CALSACADIAALELGKQVHGQVVRTGYEKGCLVGNALVGMYCKCGCIDEAYDVFQGVQHK 442

Query: 477 SEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIF 536
             V+WNTM++GY  HG G +AL +F  M+ +G++P  +T + VL ACSH GL   G E F
Sbjct: 443 DIVSWNTMLAGYARHGFGRQALTVFESMITAGVKPDEITMVGVLSACSHTGLTDRGTEYF 502

Query: 537 QSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKD 596
            SM  D+G  P ++HYACM+D+LGRAG LE+A   I+ +  EP  A WGALLGA  IH +
Sbjct: 503 HSMNKDYGITPNSKHYACMIDLLGRAGCLEEAQNLIRNMPFEPDAATWGALLGASRIHGN 562

Query: 597 TNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIE 656
             L   A+E +F+++P N G +VLLSN+Y+A   ++  + +R  +++  + K PG + +E
Sbjct: 563 MELGEQAAEMVFKMEPHNSGMYVLLSNLYAASGRWVDVSKMRLKMRQIGVQKTPGYSWVE 622

Query: 657 VGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVH 716
           V    H FT GD  HP+   IYA LE+L+ KM+  G+ + T   LHDVEEEEK+ M+K H
Sbjct: 623 VQNKIHTFTVGDCFHPEKGRIYAFLEELDLKMKHEGYVSSTKLVLHDVEEEEKKHMLKYH 682

Query: 717 SEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGG 776
           SEKLA+AFG++    G  IR++KNLRVC DCH A K ISK+ GR+I+VRD++R+HHF  G
Sbjct: 683 SEKLAVAFGILTMPSGKPIRVMKNLRVCEDCHNAIKHISKIVGRLIIVRDSHRYHHFSEG 742

Query: 777 VCSCGDYW 784
           +CSC DYW
Sbjct: 743 ICSCRDYW 750



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 103/423 (24%), Positives = 195/423 (46%), Gaps = 50/423 (11%)

Query: 165 VFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQ 224
           VFD MP +++V +N+MISG ++N  F  +  +F  M        D  S   +L   A  +
Sbjct: 55  VFDAMPLRNSVSYNAMISGYLRNAKFSLARDLFDKMPHK-----DLFSWNLMLTGYARNR 109

Query: 225 ELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMIS 284
            LR   + + L   +   D V     ++S Y + G V+ A  +F  +   + IS N +++
Sbjct: 110 RLR---DARMLFDSMPEKD-VVSWNAMLSGYVRSGHVDEARDVFDRMPHKNSISWNGLLA 165

Query: 285 GYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVS 344
            Y  +G+ E + RLF           S +   LI            NC+    +K  ++ 
Sbjct: 166 AYVRSGRLEEARRLF----------ESKSDWELISC----------NCLMGGYVKRNMLG 205

Query: 345 NSSVL------------TALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGL 392
           ++  L              + + Y++  ++  AR+LF+ES  + + +W AM+  Y Q+G+
Sbjct: 206 DARQLFDQIPVRDLISWNTMISGYAQDGDLSQARRLFEESPVRDVFTWTAMVYAYVQDGM 265

Query: 393 TEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTA 452
            +EA  +F EM   +     ++ + +++  AQ   + +G+   EL +   F  NI     
Sbjct: 266 LDEARRVFDEMPQKR----EMSYNVMIAGYAQYKRMDMGR---ELFEEMPF-PNIGSWNI 317

Query: 453 LIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPS 512
           +I  Y + G++ +AR LFD+M  +  V+W  +I+GY  +G   EA+ +  EM   G   +
Sbjct: 318 MISGYCQNGDLAQARNLFDMMPQRDSVSWAAIIAGYAQNGLYEEAMNMLVEMKRDGESLN 377

Query: 513 GVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFI 572
             TF   L AC+    +  G ++   ++   G++        +V +  + G +++A +  
Sbjct: 378 RSTFCCALSACADIAALELGKQVHGQVVRT-GYEKGCLVGNALVGMYCKCGCIDEAYDVF 436

Query: 573 KGL 575
           +G+
Sbjct: 437 QGV 439



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 101/405 (24%), Positives = 184/405 (45%), Gaps = 43/405 (10%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFV----L 115
           AR LF  IP  DL  +N +I G++ +     +   +         T     Y++V    L
Sbjct: 207 ARQLFDQIPVRDLISWNTMISGYAQDGDLSQARRLFEESPVRDVFTWTAMVYAYVQDGML 266

Query: 116 SAASACCDR-------SIGVLLHGHAIVS--GYGSDLF-------VGA--ALVDLYFKFS 157
             A    D        S  V++ G+A       G +LF       +G+   ++  Y +  
Sbjct: 267 DEARRVFDEMPQKREMSYNVMIAGYAQYKRMDMGRELFEEMPFPNIGSWNIMISGYCQNG 326

Query: 158 WVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVL 217
            +  AR +FD MP++D+V W ++I+G  +N  +++++ +  +M R+G + L+ ++    L
Sbjct: 327 DLAQARNLFDMMPQRDSVSWAAIIAGYAQNGLYEEAMNMLVEMKRDGES-LNRSTFCCAL 385

Query: 218 PAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLI 277
            A A++  L LG ++    ++ G+     V   LV  Y KCG ++ A  +F+ +   D++
Sbjct: 386 SACADIAALELGKQVHGQVVRTGYEKGCLVGNALVGMYCKCGCIDEAYDVFQGVQHKDIV 445

Query: 278 SCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTN----CI 333
           S N M++GY  +G    +L +F  ++ +  + +  T+VG++       H  LT+      
Sbjct: 446 SWNTMLAGYARHGFGRQALTVFESMITAGVKPDEITMVGVLSA---CSHTGLTDRGTEYF 502

Query: 334 HSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESS-EKSLASWNAMIAGYTQNG- 391
           HS     GI  NS     +  +  R   +E A+ L      E   A+W A++     +G 
Sbjct: 503 HSMNKDYGITPNSKHYACMIDLLGRAGCLEEAQNLIRNMPFEPDAATWGALLGASRIHGN 562

Query: 392 --LTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWV 434
             L E+A  +  +M+     P+   +  +LS    L A S G+WV
Sbjct: 563 MELGEQAAEMVFKME-----PHNSGMYVLLS---NLYAAS-GRWV 598



 Score = 95.9 bits (237), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 104/441 (23%), Positives = 183/441 (41%), Gaps = 67/441 (15%)

Query: 238 KLGFHD-HVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSL 296
           K  F D H    T  +S + + G  + A  +F  +   + +S NAMISGY  N K   + 
Sbjct: 25  KPHFEDPHTVKCTKAISTHMRNGHCDLALCVFDAMPLRNSVSYNAMISGYLRNAKFSLAR 84

Query: 297 RLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVY 356
            LF ++                    P   L   N                    + T Y
Sbjct: 85  DLFDKM--------------------PHKDLFSWNL-------------------MLTGY 105

Query: 357 SRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVS 416
           +R   +  AR LFD   EK + SWNAM++GY ++G  +EA  +F  M       N ++ +
Sbjct: 106 ARNRRLRDARMLFDSMPEKDVVSWNAMLSGYVRSGHVDEARDVFDRMPHK----NSISWN 161

Query: 417 SILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHK 476
            +L+A  + G +   +    L +S++ +  +     L+  Y K   + +AR+LFD +  +
Sbjct: 162 GLLAAYVRSGRLEEAR---RLFESKS-DWELISCNCLMGGYVKRNMLGDARQLFDQIPVR 217

Query: 477 SEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIF 536
             ++WNTMISGY   G   +A +LF E   S +R    T+ +++YA    G++ E   +F
Sbjct: 218 DLISWNTMISGYAQDGDLSQARRLFEE---SPVRDV-FTWTAMVYAYVQDGMLDEARRVF 273

Query: 537 QSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKD 596
             M            Y  M+    +  +++   E  + +   P    W  ++     + D
Sbjct: 274 DEMPQKREMS-----YNVMIAGYAQYKRMDMGRELFEEMPF-PNIGSWNIMISGYCQNGD 327

Query: 597 TNLARVASEKLFELDPE--NVGYHVLLSNIYSAERDYLQAATVRQVVKK--RKLAKAPGC 652
              AR     LF++ P+  +V +  +++  Y+    Y +A  +   +K+    L ++  C
Sbjct: 328 LAQAR----NLFDMMPQRDSVSWAAIIAG-YAQNGLYEEAMNMLVEMKRDGESLNRSTFC 382

Query: 653 TLIEVGGTPHVFTSGDQLHPQ 673
             +           G Q+H Q
Sbjct: 383 CALSACADIAALELGKQVHGQ 403


>gi|49333391|gb|AAT64030.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
          Length = 805

 Score =  465 bits (1197), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 239/626 (38%), Positives = 366/626 (58%), Gaps = 23/626 (3%)

Query: 160 KSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPA 219
           +SA ++FDK+ ++D + WNSMISG + N   +  + ++  M+  G   +D  ++ +VL  
Sbjct: 202 ESASELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGID-VDLATIISVLVG 260

Query: 220 VAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISC 279
            A    L LG  +  L +K  F   +     L+  YSKCG+++ A  +F  +   +++S 
Sbjct: 261 CANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSW 320

Query: 280 NAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLK 339
            +MI+GYT +G ++ ++ L +Q+     +++   I  ++      G L     +H +   
Sbjct: 321 TSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKA 380

Query: 340 SGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISL 399
           + + SN  V  AL  +Y++   ME A  +F     K + SWN M+               
Sbjct: 381 NNMASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMVG-------------- 426

Query: 400 FQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAK 459
                  ++ P+  T++ IL ACA L A+  GK +H  +    + S+ +V+ AL+D+Y K
Sbjct: 427 -------ELKPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVK 479

Query: 460 CGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSV 519
           CG +  AR LFD++  K  V+W  MI+GYG+HG+G EA+  F+EM  +GI P  V+F+S+
Sbjct: 480 CGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISI 539

Query: 520 LYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEP 579
           LYACSH+GL+ +G   F  M +D   +P  EHYACMVD+L R G L KA +FI+ L + P
Sbjct: 540 LYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAP 599

Query: 580 GPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQ 639
              +WGALL  C I+ D  LA   +E++FEL+PEN GY+VLL+NIY+      +   +R+
Sbjct: 600 DATIWGALLCGCRIYHDIELAEKVAERVFELEPENTGYYVLLANIYAEAEKREEVKRMRE 659

Query: 640 VVKKRKLAKAPGCTLIEVGGTPHVFTSGDQ-LHPQSTAIYAMLEKLNGKMREAGFQTETV 698
            + K+ L K PGC+ IE+ G  ++F SG+   HP S  I ++L+K+  KM+E G+  +T 
Sbjct: 660 KIGKKGLRKNPGCSWIEIKGRVNLFVSGNNSSHPHSKKIESLLKKMRRKMKEEGYFPKTK 719

Query: 699 TALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVT 758
            AL + +E +KE+ +  HSEKLA+AFGL+   P   IR+ KNLRVC DCH   KF+SK T
Sbjct: 720 YALINADEMQKEMALCGHSEKLAMAFGLLTLPPRKTIRVTKNLRVCGDCHEMAKFMSKET 779

Query: 759 GRVIVVRDANRFHHFKGGVCSCGDYW 784
            R IV+RD+NRFHHFK G CSC  +W
Sbjct: 780 RREIVLRDSNRFHHFKDGYCSCRGFW 805



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 106/342 (30%), Positives = 177/342 (51%), Gaps = 42/342 (12%)

Query: 244 HVYVLTGLVSFYSKCGEVERAELLFRDIV-------RP-------------DLISCNAMI 283
           +VY+   +VS Y+K G+ + +  LF+ +V       RP             D+IS N+MI
Sbjct: 164 NVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESASELFDKLCDRDVISWNSMI 223

Query: 284 SGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIV 343
           SGY  NG TE  L +++Q++     V+ +TI+ ++      G L L   +HS  +KS   
Sbjct: 224 SGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFE 283

Query: 344 SNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEM 403
              +    L  +YS+  +++ A ++F++  E+++ SW +MIAGYT++G ++ AI L Q+M
Sbjct: 284 RRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGWSDGAIILLQQM 343

Query: 404 QASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNI 463
           +   V  + V ++SIL ACA+ G++  GK VH+ +K+ N  SN++V  AL+DMYAKCG++
Sbjct: 344 EKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMASNLFVCNALMDMYAKCGSM 403

Query: 464 VEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYAC 523
             A  +F  M  K  ++WNTM+                       ++P   T   +L AC
Sbjct: 404 EGANSVFSTMVVKDIISWNTMV---------------------GELKPDSRTMACILPAC 442

Query: 524 SHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQL 565
           +    +  G EI    I  +G+         +VD+  + G L
Sbjct: 443 ASLSALERGKEI-HGYILRNGYSSDRHVANALVDLYVKCGVL 483



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 130/505 (25%), Positives = 228/505 (45%), Gaps = 31/505 (6%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           A  LF  +   D+  +N +I G+ +N + +  +  Y  +     +  D  T   VL   +
Sbjct: 204 ASELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMY-LGIDVDLATIISVLVGCA 262

Query: 120 ACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNS 179
                S+G  +H  AI S +   +     L+D+Y K   +  A +VF+KM E++ V W S
Sbjct: 263 NSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTS 322

Query: 180 MISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKL 239
           MI+G  ++     +I +   M +  G  LD  ++ ++L A A    L  G ++       
Sbjct: 323 MIAGYTRDGWSDGAIILLQQMEKE-GVKLDVVAITSILHACARSGSLDNGKDVHDYIKAN 381

Query: 240 GFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLF 299
               +++V   L+  Y+KCG +E A  +F  +V  D+IS N M+                
Sbjct: 382 NMASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMVGEL------------- 428

Query: 300 RQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRL 359
                   + +S T+  ++P       L     IH + L++G  S+  V  AL  +Y + 
Sbjct: 429 --------KPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKC 480

Query: 360 NEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSIL 419
             +  AR LFD    K L SW  MIAGY  +G   EAI+ F EM+ + + P+ V+  SIL
Sbjct: 481 GVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISIL 540

Query: 420 SACAQLGAISLG-KWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSE 478
            AC+  G +  G ++ + +    N E  +     ++D+ ++ GN+ +A +  + +    +
Sbjct: 541 YACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAPD 600

Query: 479 VT-WNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQ 537
            T W  ++ G  ++ H +E  +  +E +   + P    +  VL A  +A    E  E  +
Sbjct: 601 ATIWGALLCGCRIY-HDIELAEKVAERVFE-LEPENTGYY-VLLANIYAEA--EKREEVK 655

Query: 538 SMIHDHGFKPLAEHYAC-MVDILGR 561
            M    G K L ++  C  ++I GR
Sbjct: 656 RMREKIGKKGLRKNPGCSWIEIKGR 680



 Score =  115 bits (289), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 86/353 (24%), Positives = 154/353 (43%), Gaps = 62/353 (17%)

Query: 333 IHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMI-------- 384
           +HS    + +  + ++   L + Y+   +++  R++FD   +K++  WN M+        
Sbjct: 121 VHSIIKSNSVGVDEALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGD 180

Query: 385 -------------------------------------------AGYTQNGLTEEAISLFQ 401
                                                      +GY  NGLTE  + +++
Sbjct: 181 FKESICLFKIMVEKGIEGKRPESASELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYK 240

Query: 402 EMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCG 461
           +M    +  +  T+ S+L  CA  G +SLGK VH L    +FE  I  S  L+DMY+KCG
Sbjct: 241 QMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCG 300

Query: 462 NIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLY 521
           ++  A  +F+ M  ++ V+W +MI+GY   G    A+ L  +M   G++   V   S+L+
Sbjct: 301 DLDGALRVFEKMGERNVVSWTSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILH 360

Query: 522 ACSHAGLVREGDEIFQSMIHDHGFKPLAEHYAC--MVDILGRAGQLEKALEFIKGLAVEP 579
           AC+ +G +  G ++   +  ++    L   + C  ++D+  + G +E A      + V+ 
Sbjct: 361 ACARSGSLDNGKDVHDYIKANNMASNL---FVCNALMDMYAKCGSMEGANSVFSTMVVKD 417

Query: 580 GPAVWGALLGACMIHKDTN---LARVASEKLFELDPENVGYHVLLSNIYSAER 629
             + W  ++G       T    L   AS    E   E  GY  +L N YS++R
Sbjct: 418 IIS-WNTMVGELKPDSRTMACILPACASLSALERGKEIHGY--ILRNGYSSDR 467



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 53/184 (28%), Positives = 87/184 (47%), Gaps = 18/184 (9%)

Query: 374 EKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKW 433
           +  +  +NA I  + Q G  E A+ L    Q S++     T  S+L  CA L +++ GK 
Sbjct: 63  DHQVTDYNAKILHFCQLGDLENAMELVCMCQKSELETK--TYGSVLQLCAGLKSLTDGKK 120

Query: 434 VHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGH 493
           VH ++KS +   +  +   L+  YA CG++ E R +FD M  K+   WN M+S Y   G 
Sbjct: 121 VHSIIKSNSVGVDEALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGD 180

Query: 494 GLEALQLFSEMLHSGI---RPSG-------------VTFLSVLYACSHAGLVREGDEIFQ 537
             E++ LF  M+  GI   RP               +++ S++      GL   G  I++
Sbjct: 181 FKESICLFKIMVEKGIEGKRPESASELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYK 240

Query: 538 SMIH 541
            M++
Sbjct: 241 QMMY 244


>gi|224134923|ref|XP_002327523.1| predicted protein [Populus trichocarpa]
 gi|222836077|gb|EEE74498.1| predicted protein [Populus trichocarpa]
          Length = 635

 Score =  465 bits (1197), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 239/624 (38%), Positives = 350/624 (56%), Gaps = 56/624 (8%)

Query: 162 ARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMV-RNGGTWLDSTSVAAVLPAV 220
           AR++FD +PE     WN M  G  +  C +  + ++ +M+ RN     D  +   +    
Sbjct: 67  ARQLFDTIPEPSVFSWNIMFKGYSRIACPKLGVSLYLEMLERNVKP--DCYTYPFLFKGF 124

Query: 221 AEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCN 280
                L+LG E+ C  +K G   +V+    L++ YS CG ++ A  +F    + D+++ N
Sbjct: 125 TRSVALQLGRELHCHVVKYGLDSNVFAHNALINMYSLCGLIDMARGIFDMSCKSDVVTWN 184

Query: 281 AMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKS 340
           AM                    ++   R+                             K 
Sbjct: 185 AM--------------------ISGYNRI-----------------------------KK 195

Query: 341 GIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLF 400
            ++S     TA+ T +    +++AARK F +  E+   SW AMI GY +    +EA+ LF
Sbjct: 196 DVIS----WTAIVTGFVNTGQVDAARKYFHKMPERDHVSWTAMIDGYLRLNCYKEALMLF 251

Query: 401 QEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKC 460
           +EMQ SK+ P+  T+ S+L+ACAQLGA+ LG+W+   +     +++ +V  ALIDMY KC
Sbjct: 252 REMQTSKIKPDEFTMVSVLTACAQLGALELGEWIRTYIDKNKVKNDTFVGNALIDMYFKC 311

Query: 461 GNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVL 520
           GN+  A  +F+ +  + + TW  M+ G  ++G G EAL +FS+ML + + P  VT++ VL
Sbjct: 312 GNVEMALSIFNTLPQRDKFTWTAMVVGLAINGCGEEALNMFSQMLKASVTPDEVTYVGVL 371

Query: 521 YACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPG 580
            AC+H G+V EG + F SM   HG +P   HY CMVD+LG+AG L++A E IK + ++P 
Sbjct: 372 SACTHTGMVDEGKKFFASMTARHGIEPNIAHYGCMVDLLGKAGHLKEAHEIIKNMPMKPN 431

Query: 581 PAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQV 640
             VWGALLGAC IHKD  +A  A E++ EL+P N   +VL  NIY+A   + +   +RQV
Sbjct: 432 SIVWGALLGACRIHKDAEMAERAIEQILELEPNNGAVYVLQCNIYAACNKWDKLRELRQV 491

Query: 641 VKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTA 700
           +  R + K PGC+LIE+ G  H F +GDQ HPQ+  IY  L K+   ++ AG+   T   
Sbjct: 492 MMDRGIKKTPGCSLIEMNGIVHEFVAGDQSHPQTKEIYGKLNKMTSDLKIAGYSPNTSEV 551

Query: 701 LHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGR 760
             D+ EE+KE  +  HSEKLAIAFGLI + PG  IRI+KNLR+C+DCH   K +SKV  R
Sbjct: 552 FLDIAEEDKENAVYRHSEKLAIAFGLINSGPGVTIRIVKNLRMCIDCHHVAKLVSKVYDR 611

Query: 761 VIVVRDANRFHHFKGGVCSCGDYW 784
            ++VRD  RFHHF+ G CSC DYW
Sbjct: 612 EVIVRDRTRFHHFRHGSCSCKDYW 635



 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 128/523 (24%), Positives = 220/523 (42%), Gaps = 88/523 (16%)

Query: 2   SMKTPQSRNLFLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRL--SDFKATCY 59
           S  +P + N  LSL +  K+   L Q H++ I  G   +     K+       +F   CY
Sbjct: 7   SQSSPVTENPPLSLFETCKSMYHLKQIHSRTIKTGIICNPIIQNKILSFCCSREFGDMCY 66

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           AR LF +IP+P +F +N++ +G+S    PK  +  Y  + +   + PD +TY F+    +
Sbjct: 67  ARQLFDTIPEPSVFSWNIMFKGYSRIACPKLGVSLYLEMLERN-VKPDCYTYPFLFKGFT 125

Query: 120 ACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLY------------FKFS---------- 157
                 +G  LH H +  G  S++F   AL+++Y            F  S          
Sbjct: 126 RSVALQLGRELHCHVVKYGLDSNVFAHNALINMYSLCGLIDMARGIFDMSCKSDVVTWNA 185

Query: 158 --------------W------------VKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQ 191
                         W            V +ARK F KMPE+D V W +MI G ++  C++
Sbjct: 186 MISGYNRIKKDVISWTAIVTGFVNTGQVDAARKYFHKMPERDHVSWTAMIDGYLRLNCYK 245

Query: 192 DSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGL 251
           +++ +F +M +      D  ++ +VL A A++  L LG  I+    K    +  +V   L
Sbjct: 246 EALMLFREM-QTSKIKPDEFTMVSVLTACAQLGALELGEWIRTYIDKNKVKNDTFVGNAL 304

Query: 252 VSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNS 311
           +  Y KCG VE A  +F  + + D  +  AM+ G   NG  E +L +F Q+L ++   + 
Sbjct: 305 IDMYFKCGNVEMALSIFNTLPQRDKFTWTAMVVGLAINGCGEEALNMFSQMLKASVTPDE 364

Query: 312 STIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDE 371
            T VG++                S C  +G+V       A  T    +            
Sbjct: 365 VTYVGVL----------------SACTHTGMVDEGKKFFASMTARHGI------------ 396

Query: 372 SSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACA-QLGAISL 430
             E ++A +  M+    + G  +EA  + + M    + PN +   ++L AC     A   
Sbjct: 397 --EPNIAHYGCMVDLLGKAGHLKEAHEIIKNM---PMKPNSIVWGALLGACRIHKDAEMA 451

Query: 431 GKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLM 473
            + + ++++       +YV     ++YA C    + REL  +M
Sbjct: 452 ERAIEQILELEPNNGAVYVLQC--NIYAACNKWDKLRELRQVM 492



 Score =  113 bits (282), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 90/306 (29%), Positives = 133/306 (43%), Gaps = 52/306 (16%)

Query: 333 IHSFCLKSGIVSNSSVLTA-LSTVYSR-LNEMEAARKLFDESSEKSLASWNAMIAGYTQN 390
           IHS  +K+GI+ N  +    LS   SR   +M  AR+LFD   E S+ SWN M  GY++ 
Sbjct: 33  IHSRTIKTGIICNPIIQNKILSFCCSREFGDMCYARQLFDTIPEPSVFSWNIMFKGYSRI 92

Query: 391 GLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVS 450
              +  +SL+ EM    V P+  T   +     +  A+ LG+ +H  V     +SN++  
Sbjct: 93  ACPKLGVSLYLEMLERNVKPDCYTYPFLFKGFTRSVALQLGRELHCHVVKYGLDSNVFAH 152

Query: 451 TALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGL-------------------- 490
            ALI+MY+ CG I  AR +FD+      VTWN MISGY                      
Sbjct: 153 NALINMYSLCGLIDMARGIFDMSCKSDVVTWNAMISGYNRIKKDVISWTAIVTGFVNTGQ 212

Query: 491 ------HGHGL----------------------EALQLFSEMLHSGIRPSGVTFLSVLYA 522
                 + H +                      EAL LF EM  S I+P   T +SVL A
Sbjct: 213 VDAARKYFHKMPERDHVSWTAMIDGYLRLNCYKEALMLFREMQTSKIKPDEFTMVSVLTA 272

Query: 523 CSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPA 582
           C+  G +  G+ I ++ I  +  K        ++D+  + G +E AL     L  +    
Sbjct: 273 CAQLGALELGEWI-RTYIDKNKVKNDTFVGNALIDMYFKCGNVEMALSIFNTLP-QRDKF 330

Query: 583 VWGALL 588
            W A++
Sbjct: 331 TWTAMV 336



 Score = 40.4 bits (93), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 30/137 (21%), Positives = 61/137 (44%), Gaps = 3/137 (2%)

Query: 461 GNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVL 520
           G++  AR+LFD +   S  +WN M  GY         + L+ EML   ++P   T+  + 
Sbjct: 62  GDMCYARQLFDTIPEPSVFSWNIMFKGYSRIACPKLGVSLYLEMLERNVKPDCYTYPFLF 121

Query: 521 YACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPG 580
              + +  ++ G E+   ++  +G       +  ++++    G ++ A   I  ++ +  
Sbjct: 122 KGFTRSVALQLGRELHCHVV-KYGLDSNVFAHNALINMYSLCGLIDMA-RGIFDMSCKSD 179

Query: 581 PAVWGALL-GACMIHKD 596
              W A++ G   I KD
Sbjct: 180 VVTWNAMISGYNRIKKD 196


>gi|225423549|ref|XP_002274857.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g69350, mitochondrial [Vitis vinifera]
          Length = 875

 Score =  465 bits (1197), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 269/785 (34%), Positives = 422/785 (53%), Gaps = 8/785 (1%)

Query: 4   KTPQSRNLFLSLLKGAKTQSQLT---QTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYA 60
           +T  S  +F S+LK       L+   + H ++I  GF++D    T L     +      A
Sbjct: 95  QTQISNFVFPSVLKACSGFGDLSVGGKVHGRVIKCGFESDAVVETSLLCMYGEMSCLDDA 154

Query: 61  RALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASA 120
              F ++P  D+  ++ I+  F  N      +  ++ +  + A+ PD+ T   V  A S 
Sbjct: 155 CKAFDTMPIRDVVAWSSIVLNFVQNGQASEGLDMFSQM-ISEAVEPDSVTMLSVTEACSE 213

Query: 121 CCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSM 180
                +G  +HG+ +     S+  +  +L+ +Y K   + SA ++F+ +P + T  W  M
Sbjct: 214 LGSLRLGRSVHGYVVRREIESNASLNNSLIVMYGKLGDLYSAERLFENVPCRMTAPWTPM 273

Query: 181 ISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLG 240
           IS   ++ CFQ+++ VF  M +      +  ++  VL A A +  ++ G  +    ++  
Sbjct: 274 ISCYNQSGCFQEALNVFAKM-QEFKMEPNQVTMVGVLCACARLGRVKEGRSVHGFVIRRA 332

Query: 241 FHDHVYVL-TGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLF 299
               +  L   L+  Y+  G +     +F  I    ++S N +IS +T NG+ E +L LF
Sbjct: 333 MDPELDFLGPALMELYADTGNLRDCHKVFETIKEKTILSWNTLISIFTRNGQPEEALLLF 392

Query: 300 RQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRL 359
            Q+       +S ++   +          L   IH + +K+G   N  V  AL  +Y++ 
Sbjct: 393 VQMQTQGLMPDSYSLASSLSACGTISFSQLGAQIHGYIIKTGNF-NDFVQNALIDMYAKC 451

Query: 360 NEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSIL 419
             + +A K+F++  EKSL +WN+MI G++QNG + EAI+LF +M  + V  + +T  S++
Sbjct: 452 GFVHSANKMFEKIKEKSLVTWNSMICGFSQNGYSVEAITLFDQMYMNCVKMDKLTFLSVI 511

Query: 420 SACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEV 479
            AC+ LG +  GKWVH  +       + Y+ TAL DMY+KCG +  A  +FD MS +S V
Sbjct: 512 QACSHLGYLEKGKWVHHKLIMYGLRKDSYLDTALTDMYSKCGELQMAHGVFDRMSERSIV 571

Query: 480 TWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSM 539
           +W+ MI+GYG+HG     + LF++ML SGI+P+ +TF+ +L ACSHAG V EG   F SM
Sbjct: 572 SWSVMIAGYGMHGQINATISLFNQMLGSGIKPNDITFMHILSACSHAGAVEEGKLYFNSM 631

Query: 540 IHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNL 599
             + G +P  +H+ACMVD+L RAG L  A + I  L      ++WGALL  C IHK  ++
Sbjct: 632 -SEFGVEPKHDHFACMVDLLSRAGDLNGAYQIITSLPFPANSSIWGALLNGCRIHKRIDI 690

Query: 600 ARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGG 659
            +   + L ++D  + GY+ LLSNIY+ E  + +   VR ++K + L K PG + IE+  
Sbjct: 691 IKSIEKNLLDVDTADTGYYTLLSNIYAEEGTWDKFGKVRSMMKSKGLRKVPGYSTIEIDK 750

Query: 660 TPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEK 719
             + F  GD  H Q+  IY  LE     +    + +E   ++    +  KE  +  HSEK
Sbjct: 751 KIYRFGPGDTSHSQTKDIYRFLENFRSLVHAQVYDSEPDNSIVGTSKFNKENNVVSHSEK 810

Query: 720 LAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCS 779
           LAIAFG+I T PGT +RI KNLRVC DCH+  K  SK+TGR I++RD NRFH F+ G CS
Sbjct: 811 LAIAFGIINTRPGTTLRISKNLRVCRDCHSFAKIASKITGREIIMRDLNRFHCFRNGSCS 870

Query: 780 CGDYW 784
           C DYW
Sbjct: 871 CNDYW 875



 Score =  261 bits (668), Expect = 8e-67,   Method: Compositional matrix adjust.
 Identities = 169/590 (28%), Positives = 294/590 (49%), Gaps = 7/590 (1%)

Query: 11  LFLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKP 70
           L++ L +   T + LTQ HA + I G        TKL    +       ++ +F + PKP
Sbjct: 3   LYMPLFRRCATSTTLTQLHAHLFITGLHRHPPASTKLIESYAQIGIFESSKRVFDTFPKP 62

Query: 71  DLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLL 130
           D F++ V+I+ +      + ++  Y  +         NF +  VL A S   D S+G  +
Sbjct: 63  DSFMWGVLIKCYVWGGFFEEAVSLYHEMVYQDQTQISNFVFPSVLKACSGFGDLSVGGKV 122

Query: 131 HGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCF 190
           HG  I  G+ SD  V  +L+ +Y + S +  A K FD MP +D V W+S++   ++N   
Sbjct: 123 HGRVIKCGFESDAVVETSLLCMYGEMSCLDDACKAFDTMPIRDVVAWSSIVLNFVQNGQA 182

Query: 191 QDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTG 250
            + + +F  M+       DS ++ +V  A +E+  LRLG  +    ++     +  +   
Sbjct: 183 SEGLDMFSQMISE-AVEPDSVTMLSVTEACSELGSLRLGRSVHGYVVRREIESNASLNNS 241

Query: 251 LVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVN 310
           L+  Y K G++  AE LF ++          MIS Y  +G  + +L +F ++       N
Sbjct: 242 LIVMYGKLGDLYSAERLFENVPCRMTAPWTPMISCYNQSGCFQEALNVFAKMQEFKMEPN 301

Query: 311 SSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVL-TALSTVYSRLNEMEAARKLF 369
             T+VG++      G +     +H F ++  +      L  AL  +Y+    +    K+F
Sbjct: 302 QVTMVGVLCACARLGRVKEGRSVHGFVIRRAMDPELDFLGPALMELYADTGNLRDCHKVF 361

Query: 370 DESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAIS 429
           +   EK++ SWN +I+ +T+NG  EEA+ LF +MQ   + P+  +++S LSAC  +    
Sbjct: 362 ETIKEKTILSWNTLISIFTRNGQPEEALLLFVQMQTQGLMPDSYSLASSLSACGTISFSQ 421

Query: 430 LGKWVH-ELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGY 488
           LG  +H  ++K+ NF  N +V  ALIDMYAKCG +  A ++F+ +  KS VTWN+MI G+
Sbjct: 422 LGAQIHGYIIKTGNF--NDFVQNALIDMYAKCGFVHSANKMFEKIKEKSLVTWNSMICGF 479

Query: 489 GLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPL 548
             +G+ +EA+ LF +M  + ++   +TFLSV+ ACSH G + +G  +   +I  +G +  
Sbjct: 480 SQNGYSVEAITLFDQMYMNCVKMDKLTFLSVIQACSHLGYLEKGKWVHHKLIM-YGLRKD 538

Query: 549 AEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTN 598
           +     + D+  + G+L+ A      ++ E     W  ++    +H   N
Sbjct: 539 SYLDTALTDMYSKCGELQMAHGVFDRMS-ERSIVSWSVMIAGYGMHGQIN 587


>gi|449523810|ref|XP_004168916.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At2g01510-like [Cucumis
           sativus]
          Length = 816

 Score =  465 bits (1196), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 256/726 (35%), Positives = 403/726 (55%), Gaps = 3/726 (0%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           AR LF  + +     + ++I G+  +   K +   Y  +R+   + PD  T   +LS   
Sbjct: 93  ARELFDGMVERTAVSWTILIGGYLQSNQSKEAFRLYADMRRG-GIEPDYVTLVTLLSGFG 151

Query: 120 ACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNS 179
               +++ V +H H I  GY  +L V  +LVD Y K   +  A ++F  M  KDTV +NS
Sbjct: 152 ELETKNVIVQIHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLASQLFKHMLNKDTVTFNS 211

Query: 180 MISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKL 239
           +++G       +++I +F ++  N G      + AA+L A   + + + G ++    LK 
Sbjct: 212 LMTGYSNEGLNEEAIELFLEL-HNSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLKT 270

Query: 240 GFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLF 299
            F  +V+V   L+ +YSK  +V+    LF ++   D IS N +I+ Y  NG+ + S  LF
Sbjct: 271 NFVWNVFVGNALLDYYSKHDQVDEVGKLFXEMPELDGISYNVVITSYAWNGQFKESFDLF 330

Query: 300 RQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRL 359
           R+L  +           L+ +     +L +   IH   +  G    S V  AL  +Y++ 
Sbjct: 331 RKLQFTRFDRRQFPFATLLSIATSSLNLRMGRQIHCQAITVGANFESRVENALVDMYAKC 390

Query: 360 NEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSIL 419
           N  + A+K+FD  + KS   W AMI+ Y Q G  EE I++F +M+ + V  +  T +SIL
Sbjct: 391 NGDKEAQKIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFSDMRRTGVPADQATFASIL 450

Query: 420 SACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEV 479
            ACA L +ISLG+ +H L+    F SN+Y  +AL+D YAKCG + +A + F  M  ++ V
Sbjct: 451 RACANLASISLGRQLHSLLIRSGFMSNVYSGSALLDTYAKCGCMTDAIKSFGEMPERNSV 510

Query: 480 TWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSM 539
           +WN +IS Y  +G+    L  F +M+ SG +P  V+FLSVL ACSH G V E    F SM
Sbjct: 511 SWNALISAYAQNGNVDGTLNSFQQMIQSGYKPDSVSFLSVLSACSHCGFVEEALWHFNSM 570

Query: 540 IHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNL 599
              +   P  EHY  MVD+L R G+ ++A + +  +  EP   +W ++L +C IHK+  L
Sbjct: 571 TQIYEVTPKREHYTSMVDVLCRNGRFDEAEKLMTEMPFEPSEIMWSSVLNSCRIHKNHEL 630

Query: 600 ARVASEKLFEL-DPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVG 658
           A+ A+++LF + D  +   ++ +SNIY+    +   A V++ ++ R + K P  + +E+ 
Sbjct: 631 AKKAADRLFNMEDLRDAAPYINMSNIYAVAGQWDNVAKVKKAMRDRGVRKVPAYSWVEIK 690

Query: 659 GTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSE 718
              HVF++ D+ HP+   I   +  L+ +M + G++ +T  ALHDV+E  K   +K HSE
Sbjct: 691 HQTHVFSANDKSHPEMKKILRKINALSKEMEKKGYKPDTTCALHDVDEVIKIESLKYHSE 750

Query: 719 KLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVC 778
           + AIAF L+ T  G+ I ++KNLR C DCH A K IS++  R I+VRD++RFHHFK GVC
Sbjct: 751 RFAIAFALMNTPDGSPIVVMKNLRACTDCHAAIKVISQIVEREIIVRDSSRFHHFKDGVC 810

Query: 779 SCGDYW 784
           SCGDYW
Sbjct: 811 SCGDYW 816



 Score =  195 bits (495), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 134/493 (27%), Positives = 233/493 (47%), Gaps = 23/493 (4%)

Query: 12  FLSLLKG---AKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIP 68
            ++LL G    +T++ + Q H  +I  G++ +L     L            A  LF  + 
Sbjct: 143 LVTLLSGFGELETKNVIVQIHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLASQLFKHML 202

Query: 69  KPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGV 128
             D   FN ++ G+SN  + + +I  +  L  N+ + P +FT++ +LSAA    D   G 
Sbjct: 203 NKDTVTFNSLMTGYSNEGLNEEAIELFLELH-NSGIKPSDFTFAALLSAAVGLDDTKFGQ 261

Query: 129 LLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNC 188
            +HG  + + +  ++FVG AL+D Y K   V    K+F +MPE D + +N +I+    N 
Sbjct: 262 QVHGFVLKTNFVWNVFVGNALLDYYSKHDQVDEVGKLFXEMPELDGISYNVVITSYAWNG 321

Query: 189 CFQDSIWVFGDMVRNGGTWLDSTS--VAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVY 246
            F++S  +F  +     T  D      A +L        LR+G +I C  + +G +    
Sbjct: 322 QFKESFDLFRKL---QFTRFDRRQFPFATLLSIATSSLNLRMGRQIHCQAITVGANFESR 378

Query: 247 VLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASA 306
           V   LV  Y+KC   + A+ +F +I     +   AMIS Y   GK E  + +F  +  + 
Sbjct: 379 VENALVDMYAKCNGDKEAQKIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFSDMRRTG 438

Query: 307 ERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAAR 366
              + +T   ++        + L   +HS  ++SG +SN    +AL   Y++   M  A 
Sbjct: 439 VPADQATFASILRACANLASISLGRQLHSLLIRSGFMSNVYSGSALLDTYAKCGCMTDAI 498

Query: 367 KLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLG 426
           K F E  E++  SWNA+I+ Y QNG  +  ++ FQ+M  S   P+ V+  S+LSAC+  G
Sbjct: 499 KSFGEMPERNSVSWNALISAYAQNGNVDGTLNSFQQMIQSGYKPDSVSFLSVLSACSHCG 558

Query: 427 AISLGKW-------VHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHK-SE 478
            +    W       ++E+   R         T+++D+  + G   EA +L   M  + SE
Sbjct: 559 FVEEALWHFNSMTQIYEVTPKREH------YTSMVDVLCRNGRFDEAEKLMTEMPFEPSE 612

Query: 479 VTWNTMISGYGLH 491
           + W+++++   +H
Sbjct: 613 IMWSSVLNSCRIH 625



 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 128/467 (27%), Positives = 228/467 (48%), Gaps = 8/467 (1%)

Query: 127 GVLLHGHAIVSGYGSDLFVG-AALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLM 185
           G L+H H +     +   +    ++  + KF  +  AR++FD M E+  V W  +I G +
Sbjct: 57  GDLVHAHQVFDQMPAKNTISLNMMISGHLKFGKLSKARELFDGMVERTAVSWTILIGGYL 116

Query: 186 KNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHV 245
           ++   +++  ++ DM R GG   D  ++  +L    E++   + ++I    +KLG+  ++
Sbjct: 117 QSNQSKEAFRLYADM-RRGGIEPDYVTLVTLLSGFGELETKNVIVQIHTHVIKLGYEYNL 175

Query: 246 YVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLAS 305
            V   LV  Y K   +  A  LF+ ++  D ++ N++++GY+  G  E ++ LF +L  S
Sbjct: 176 MVCNSLVDAYCKTHCLYLASQLFKHMLNKDTVTFNSLMTGYSNEGLNEEAIELFLELHNS 235

Query: 306 AERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAA 365
             + +  T   L+              +H F LK+  V N  V  AL   YS+ ++++  
Sbjct: 236 GIKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLKTNFVWNVFVGNALLDYYSKHDQVDEV 295

Query: 366 RKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQL 425
            KLF E  E    S+N +I  Y  NG  +E+  LF+++Q ++        +++LS     
Sbjct: 296 GKLFXEMPELDGISYNVVITSYAWNGQFKESFDLFRKLQFTRFDRRQFPFATLLSIATSS 355

Query: 426 GAISLGKWVH--ELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNT 483
             + +G+ +H   +    NFES   V  AL+DMYAKC    EA+++FD ++ KS V W  
Sbjct: 356 LNLRMGRQIHCQAITVGANFESR--VENALVDMYAKCNGDKEAQKIFDNIACKSTVPWTA 413

Query: 484 MISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDH 543
           MIS Y   G   E + +FS+M  +G+     TF S+L AC++   +  G ++  S++   
Sbjct: 414 MISAYVQKGKHEEGINVFSDMRRTGVPADQATFASILRACANLASISLGRQL-HSLLIRS 472

Query: 544 GFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGA 590
           GF       + ++D   + G +  A++   G   E     W AL+ A
Sbjct: 473 GFMSNVYSGSALLDTYAKCGCMTDAIKSF-GEMPERNSVSWNALISA 518



 Score = 43.1 bits (100), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 39/145 (26%), Positives = 58/145 (40%), Gaps = 37/145 (25%)

Query: 443 FESNIYVSTALIDMYAKCGNIVEA-------------------------------RELFD 471
           F  N   S   ++ + + G++V A                               RELFD
Sbjct: 39  FNPNTCRSNFQVNNFLERGDLVHAHQVFDQMPAKNTISLNMMISGHLKFGKLSKARELFD 98

Query: 472 LMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVRE 531
            M  ++ V+W  +I GY       EA +L+++M   GI P  VT +++L   S  G +  
Sbjct: 99  GMVERTAVSWTILIGGYLQSNQSKEAFRLYADMRRGGIEPDYVTLVTLL---SGFGELET 155

Query: 532 GDEIFQSMIHDHGFKPLAEHYACMV 556
            + I Q  IH H  K L   Y  MV
Sbjct: 156 KNVIVQ--IHTHVIK-LGYEYNLMV 177


>gi|449460574|ref|XP_004148020.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g01510-like [Cucumis sativus]
          Length = 816

 Score =  465 bits (1196), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 256/726 (35%), Positives = 403/726 (55%), Gaps = 3/726 (0%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           AR LF  + +     + ++I G+  +   K +   Y  +R+   + PD  T   +LS   
Sbjct: 93  ARELFDGMVERTAVSWTILIGGYLQSNQSKEAFRLYADMRRG-GIEPDYVTLVTLLSGFG 151

Query: 120 ACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNS 179
               +++ V +H H I  GY  +L V  +LVD Y K   +  A ++F  M  KDTV +NS
Sbjct: 152 ELETKNVIVQIHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLASQLFKHMLNKDTVTFNS 211

Query: 180 MISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKL 239
           +++G       +++I +F ++  N G      + AA+L A   + + + G ++    LK 
Sbjct: 212 LMTGYSNEGLNEEAIELFLEL-HNSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLKT 270

Query: 240 GFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLF 299
            F  +V+V   L+ +YSK  +V+    LF ++   D IS N +I+ Y  NG+ + S  LF
Sbjct: 271 NFVWNVFVGNALLDYYSKHDQVDEVGKLFYEMPELDGISYNVVITSYAWNGQFKESFDLF 330

Query: 300 RQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRL 359
           R+L  +           L+ +     +L +   IH   +  G    S V  AL  +Y++ 
Sbjct: 331 RKLQFTRFDRRQFPFATLLSIATSSLNLRMGRQIHCQAITVGANFESRVENALVDMYAKC 390

Query: 360 NEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSIL 419
           N  + A+K+FD  + KS   W AMI+ Y Q G  EE I++F +M+ + V  +  T +SIL
Sbjct: 391 NGDKEAQKIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFSDMRRTGVPADQATFASIL 450

Query: 420 SACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEV 479
            ACA L +ISLG+ +H L+    F SN+Y  +AL+D YAKCG + +A + F  M  ++ V
Sbjct: 451 RACANLASISLGRQLHSLLIRSGFMSNVYSGSALLDTYAKCGCMTDAIKSFGEMPERNSV 510

Query: 480 TWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSM 539
           +WN +IS Y  +G+    L  F +M+ SG +P  V+FLSVL ACSH G V E    F SM
Sbjct: 511 SWNALISAYAQNGNVDGTLNSFQQMIQSGYKPDSVSFLSVLSACSHCGFVEEALWHFNSM 570

Query: 540 IHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNL 599
              +   P  EHY  MVD+L R G+ ++A + +  +  EP   +W ++L +C IHK+  L
Sbjct: 571 TQIYEVTPKREHYTSMVDVLCRNGRFDEAEKLMTEMPFEPSEIMWSSVLNSCRIHKNHEL 630

Query: 600 ARVASEKLFEL-DPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVG 658
           A+ A+++LF + D  +   ++ +SNIY+    +   A V++ ++ R + K P  + +E+ 
Sbjct: 631 AKKAADRLFNMEDLRDAAPYINMSNIYAVAGQWDNVAKVKKAMRDRGVRKVPAYSWVEIK 690

Query: 659 GTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSE 718
              HVF++ D+ HP+   I   +  L+ +M + G++ +T  ALHDV+E  K   +K HSE
Sbjct: 691 HQTHVFSANDKSHPEMKKILRKINALSKEMEKKGYKPDTTCALHDVDEVIKIESLKYHSE 750

Query: 719 KLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVC 778
           + AIAF L+ T  G+ I ++KNLR C DCH A K IS++  R I+VRD++RFHHFK GVC
Sbjct: 751 RFAIAFALMNTPDGSPIVVMKNLRACTDCHAAIKVISQIVEREIIVRDSSRFHHFKDGVC 810

Query: 779 SCGDYW 784
           SCGDYW
Sbjct: 811 SCGDYW 816



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 134/493 (27%), Positives = 233/493 (47%), Gaps = 23/493 (4%)

Query: 12  FLSLLKG---AKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIP 68
            ++LL G    +T++ + Q H  +I  G++ +L     L            A  LF  + 
Sbjct: 143 LVTLLSGFGELETKNVIVQIHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLASQLFKHML 202

Query: 69  KPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGV 128
             D   FN ++ G+SN  + + +I  +  L  N+ + P +FT++ +LSAA    D   G 
Sbjct: 203 NKDTVTFNSLMTGYSNEGLNEEAIELFLELH-NSGIKPSDFTFAALLSAAVGLDDTKFGQ 261

Query: 129 LLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNC 188
            +HG  + + +  ++FVG AL+D Y K   V    K+F +MPE D + +N +I+    N 
Sbjct: 262 QVHGFVLKTNFVWNVFVGNALLDYYSKHDQVDEVGKLFYEMPELDGISYNVVITSYAWNG 321

Query: 189 CFQDSIWVFGDMVRNGGTWLDSTS--VAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVY 246
            F++S  +F  +     T  D      A +L        LR+G +I C  + +G +    
Sbjct: 322 QFKESFDLFRKL---QFTRFDRRQFPFATLLSIATSSLNLRMGRQIHCQAITVGANFESR 378

Query: 247 VLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASA 306
           V   LV  Y+KC   + A+ +F +I     +   AMIS Y   GK E  + +F  +  + 
Sbjct: 379 VENALVDMYAKCNGDKEAQKIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFSDMRRTG 438

Query: 307 ERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAAR 366
              + +T   ++        + L   +HS  ++SG +SN    +AL   Y++   M  A 
Sbjct: 439 VPADQATFASILRACANLASISLGRQLHSLLIRSGFMSNVYSGSALLDTYAKCGCMTDAI 498

Query: 367 KLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLG 426
           K F E  E++  SWNA+I+ Y QNG  +  ++ FQ+M  S   P+ V+  S+LSAC+  G
Sbjct: 499 KSFGEMPERNSVSWNALISAYAQNGNVDGTLNSFQQMIQSGYKPDSVSFLSVLSACSHCG 558

Query: 427 AISLGKW-------VHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHK-SE 478
            +    W       ++E+   R         T+++D+  + G   EA +L   M  + SE
Sbjct: 559 FVEEALWHFNSMTQIYEVTPKREH------YTSMVDVLCRNGRFDEAEKLMTEMPFEPSE 612

Query: 479 VTWNTMISGYGLH 491
           + W+++++   +H
Sbjct: 613 IMWSSVLNSCRIH 625



 Score =  192 bits (488), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 128/467 (27%), Positives = 228/467 (48%), Gaps = 8/467 (1%)

Query: 127 GVLLHGHAIVSGYGSDLFVG-AALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLM 185
           G L+H H +     +   +    ++  + KF  +  AR++FD M E+  V W  +I G +
Sbjct: 57  GDLVHAHQVFDQMPAKNTISLNMMISGHLKFGKLSKARELFDGMVERTAVSWTILIGGYL 116

Query: 186 KNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHV 245
           ++   +++  ++ DM R GG   D  ++  +L    E++   + ++I    +KLG+  ++
Sbjct: 117 QSNQSKEAFRLYADM-RRGGIEPDYVTLVTLLSGFGELETKNVIVQIHTHVIKLGYEYNL 175

Query: 246 YVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLAS 305
            V   LV  Y K   +  A  LF+ ++  D ++ N++++GY+  G  E ++ LF +L  S
Sbjct: 176 MVCNSLVDAYCKTHCLYLASQLFKHMLNKDTVTFNSLMTGYSNEGLNEEAIELFLELHNS 235

Query: 306 AERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAA 365
             + +  T   L+              +H F LK+  V N  V  AL   YS+ ++++  
Sbjct: 236 GIKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLKTNFVWNVFVGNALLDYYSKHDQVDEV 295

Query: 366 RKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQL 425
            KLF E  E    S+N +I  Y  NG  +E+  LF+++Q ++        +++LS     
Sbjct: 296 GKLFYEMPELDGISYNVVITSYAWNGQFKESFDLFRKLQFTRFDRRQFPFATLLSIATSS 355

Query: 426 GAISLGKWVH--ELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNT 483
             + +G+ +H   +    NFES   V  AL+DMYAKC    EA+++FD ++ KS V W  
Sbjct: 356 LNLRMGRQIHCQAITVGANFESR--VENALVDMYAKCNGDKEAQKIFDNIACKSTVPWTA 413

Query: 484 MISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDH 543
           MIS Y   G   E + +FS+M  +G+     TF S+L AC++   +  G ++  S++   
Sbjct: 414 MISAYVQKGKHEEGINVFSDMRRTGVPADQATFASILRACANLASISLGRQL-HSLLIRS 472

Query: 544 GFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGA 590
           GF       + ++D   + G +  A++   G   E     W AL+ A
Sbjct: 473 GFMSNVYSGSALLDTYAKCGCMTDAIKSF-GEMPERNSVSWNALISA 518



 Score = 43.1 bits (100), Expect = 0.66,   Method: Compositional matrix adjust.
 Identities = 39/145 (26%), Positives = 58/145 (40%), Gaps = 37/145 (25%)

Query: 443 FESNIYVSTALIDMYAKCGNIVEA-------------------------------RELFD 471
           F  N   S   ++ + + G++V A                               RELFD
Sbjct: 39  FNPNTCRSNFQVNNFLERGDLVHAHQVFDQMPAKNTISLNMMISGHLKFGKLSKARELFD 98

Query: 472 LMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVRE 531
            M  ++ V+W  +I GY       EA +L+++M   GI P  VT +++L   S  G +  
Sbjct: 99  GMVERTAVSWTILIGGYLQSNQSKEAFRLYADMRRGGIEPDYVTLVTLL---SGFGELET 155

Query: 532 GDEIFQSMIHDHGFKPLAEHYACMV 556
            + I Q  IH H  K L   Y  MV
Sbjct: 156 KNVIVQ--IHTHVIK-LGYEYNLMV 177


>gi|225457427|ref|XP_002282084.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g74630-like [Vitis vinifera]
          Length = 643

 Score =  464 bits (1195), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 254/625 (40%), Positives = 359/625 (57%), Gaps = 41/625 (6%)

Query: 162 ARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVA 221
           AR++F   P  D  + N++I GL ++   Q+S+  F +M R     LDS S A +L A A
Sbjct: 58  ARRLFLHFPNPDVFMHNTLIRGLAESDTPQNSLITFVEMRRRLTAPLDSFSFAFLLKAAA 117

Query: 222 EVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNA 281
             + L  G+++ C  +  G   H++V T LVS YS+CG V  A+ +F ++  P++++ NA
Sbjct: 118 SYRSLESGIQLHCQAIVHGLDTHLFVGTTLVSMYSECGFVAFAKKVFEEMFEPNVVAWNA 177

Query: 282 MISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSG 341
           +++     G  + +  +F ++                    PF +L   N          
Sbjct: 178 VVTACFRCGDVKGADMMFNRM--------------------PFRNLTSWN---------- 207

Query: 342 IVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQ 401
                     +   Y++  E+E ARKLF E   K   SW+ MI G+  NG   EA   F+
Sbjct: 208 ---------VMLAGYTKAGELELARKLFLEMPVKDDVSWSTMIVGFAHNGFFYEAFGFFR 258

Query: 402 EMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCG 461
           E+Q   + PN V+++  LSACA  GAI  GK +H  ++   F   + V+ AL+D Y+KCG
Sbjct: 259 ELQQVGMRPNEVSLTGALSACADAGAIEFGKILHGFIEKSGFLWMVSVNNALLDTYSKCG 318

Query: 462 NIVEARELFDLMSHK-SEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVL 520
           N+  AR +F+ M  K S V+W +MI+G  +HG+G EA+QLF EM  SGIRP G+ F+S+L
Sbjct: 319 NVGMARLVFERMPEKRSIVSWTSMIAGLAMHGYGEEAIQLFHEMEESGIRPDGIAFISIL 378

Query: 521 YACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPG 580
           YACSHAGL+ +G E F  M   +  +P  EHY CMVD+ GRAGQL+KA EFI  + V P 
Sbjct: 379 YACSHAGLIEKGYEYFYKMKDIYNIEPAIEHYGCMVDLYGRAGQLDKAYEFIIHMPVLPT 438

Query: 581 PAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQV 640
             +W  LLGAC IH +  LA    E+L ELDP N G HVLLSNIY+    +   A VR+ 
Sbjct: 439 AIIWRTLLGACSIHGNVKLAERVKERLSELDPNNSGDHVLLSNIYAVAGKWKDVAAVRRS 498

Query: 641 VKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMR-EAGFQTETVT 699
           +  +++ K PG ++IEV    + F +G+  +  +   Y  L+++  K+R E  +  E  +
Sbjct: 499 MTDQRMNKTPGWSMIEVDKIMYSFVAGEVQNSITEEAYEKLKEIMLKLRVEGCYIPEVGS 558

Query: 700 ALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTG 759
            LHD+E+EEKE  +  HSEKLA+AFG+     G+ IRI+KNLRVC DCHT  K ISKV G
Sbjct: 559 VLHDIEDEEKEDSVSRHSEKLAVAFGIARLCKGSIIRIVKNLRVCRDCHTVMKLISKVYG 618

Query: 760 RVIVVRDANRFHHFKGGVCSCGDYW 784
             IVVRD +RFH FK G CSC DYW
Sbjct: 619 LEIVVRDRSRFHSFKTGSCSCRDYW 643



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 145/492 (29%), Positives = 233/492 (47%), Gaps = 45/492 (9%)

Query: 7   QSRNLFLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLA--HRLSDFKATCYARALF 64
            +++L  SLL   ++   L Q HA +   G   D     KL     +S   A  YAR LF
Sbjct: 3   HTQHLCSSLLTNCRSLKNLKQVHAYVCKTGLDTDPIIAGKLLLHSAVSVPDALDYARRLF 62

Query: 65  FSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDR 124
              P PD+F+ N +IRG + ++ P++S+  +  +R+      D+F+++F+L AA++    
Sbjct: 63  LHFPNPDVFMHNTLIRGLAESDTPQNSLITFVEMRRRLTAPLDSFSFAFLLKAAASYRSL 122

Query: 125 SIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGL 184
             G+ LH  AIV G  + LFVG  LV +Y +  +V  A+KVF++M E + V WN++++  
Sbjct: 123 ESGIQLHCQAIVHGLDTHLFVGTTLVSMYSECGFVAFAKKVFEEMFEPNVVAWNAVVTA- 181

Query: 185 MKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDH 244
               CF+       DM+ N   + + TS   +L                           
Sbjct: 182 ----CFRCGDVKGADMMFNRMPFRNLTSWNVMLAG------------------------- 212

Query: 245 VYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLA 304
                     Y+K GE+E A  LF ++   D +S + MI G+  NG    +   FR+L  
Sbjct: 213 ----------YTKAGELELARKLFLEMPVKDDVSWSTMIVGFAHNGFFYEAFGFFRELQQ 262

Query: 305 SAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEA 364
              R N  ++ G +      G +     +H F  KSG +   SV  AL   YS+   +  
Sbjct: 263 VGMRPNEVSLTGALSACADAGAIEFGKILHGFIEKSGFLWMVSVNNALLDTYSKCGNVGM 322

Query: 365 ARKLFDESSEK-SLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACA 423
           AR +F+   EK S+ SW +MIAG   +G  EEAI LF EM+ S + P+ +   SIL AC+
Sbjct: 323 ARLVFERMPEKRSIVSWTSMIAGLAMHGYGEEAIQLFHEMEESGIRPDGIAFISILYACS 382

Query: 424 QLGAISLG-KWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMS-HKSEVTW 481
             G I  G ++ +++    N E  I     ++D+Y + G + +A E    M    + + W
Sbjct: 383 HAGLIEKGYEYFYKMKDIYNIEPAIEHYGCMVDLYGRAGQLDKAYEFIIHMPVLPTAIIW 442

Query: 482 NTMISGYGLHGH 493
            T++    +HG+
Sbjct: 443 RTLLGACSIHGN 454



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 66/339 (19%), Positives = 131/339 (38%), Gaps = 74/339 (21%)

Query: 329 LTNC--------IHSFCLKSGIVSNSSVLTAL--STVYSRLNEMEAARKLFDESSEKSLA 378
           LTNC        +H++  K+G+ ++  +   L   +  S  + ++ AR+LF       + 
Sbjct: 12  LTNCRSLKNLKQVHAYVCKTGLDTDPIIAGKLLLHSAVSVPDALDYARRLFLHFPNPDVF 71

Query: 379 SWNAMIAGYTQNGLTEEAISLFQEMQASKVAP-NPVTVSSILSACAQLGAISLGKWVHEL 437
             N +I G  ++   + ++  F EM+    AP +  + + +L A A   ++  G  +H  
Sbjct: 72  MHNTLIRGLAESDTPQNSLITFVEMRRRLTAPLDSFSFAFLLKAAASYRSLESGIQLHCQ 131

Query: 438 VKSRNFESNIYVSTALIDMYAKCGNIVEARE----------------------------- 468
                 +++++V T L+ MY++CG +  A++                             
Sbjct: 132 AIVHGLDTHLFVGTTLVSMYSECGFVAFAKKVFEEMFEPNVVAWNAVVTACFRCGDVKGA 191

Query: 469 --LFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEM---------------------- 504
             +F+ M  ++  +WN M++GY   G    A +LF EM                      
Sbjct: 192 DMMFNRMPFRNLTSWNVMLAGYTKAGELELARKLFLEMPVKDDVSWSTMIVGFAHNGFFY 251

Query: 505 ---------LHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACM 555
                       G+RP+ V+    L AC+ AG +  G +I    I   GF  +      +
Sbjct: 252 EAFGFFRELQQVGMRPNEVSLTGALSACADAGAIEFG-KILHGFIEKSGFLWMVSVNNAL 310

Query: 556 VDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIH 594
           +D   + G +  A    + +  +     W +++    +H
Sbjct: 311 LDTYSKCGNVGMARLVFERMPEKRSIVSWTSMIAGLAMH 349


>gi|356511287|ref|XP_003524358.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Glycine max]
          Length = 674

 Score =  464 bits (1195), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 237/610 (38%), Positives = 357/610 (58%), Gaps = 24/610 (3%)

Query: 199 DMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSK- 257
           +++R+ G   D     ++L A    +   L   +    ++LGFH  +Y    L++ YSK 
Sbjct: 65  NLLRSFGISPDRHLFPSLLRASTLFKHFNLAQSLHAAVIRLGFHFDLYTANALMNMYSKF 124

Query: 258 ---------------------CGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSL 296
                                  +++    LF  +   D++S N +I+G   NG  E +L
Sbjct: 125 HPHLSPLHEFPQARHNHNNKYSVKIDSVRKLFDRMPVRDVVSWNTVIAGNAQNGMYEEAL 184

Query: 297 RLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVY 356
            + +++     R +S T+  ++P+F    ++     IH + ++ G   +  + ++L  +Y
Sbjct: 185 NMVKEMGKENLRPDSFTLSSILPIFTEHANVTKGKEIHGYAIRHGFDKDVFIGSSLIDMY 244

Query: 357 SRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVS 416
           ++  ++E +   F   S +   SWN++IAG  QNG  ++ +  F+ M   KV P  V+ S
Sbjct: 245 AKCTQVELSVCAFHLLSNRDAISWNSIIAGCVQNGRFDQGLGFFRRMLKEKVKPMQVSFS 304

Query: 417 SILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDL--MS 474
           S++ ACA L A++LGK +H  +    F+ N +++++L+DMYAKCGNI  AR +F+   M 
Sbjct: 305 SVIPACAHLTALNLGKQLHAYIIRLGFDDNKFIASSLLDMYAKCGNIKMARYIFNKIEMC 364

Query: 475 HKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDE 534
            +  V+W  +I G  +HGH L+A+ LF EML  G++P  V F++VL ACSHAGLV EG +
Sbjct: 365 DRDMVSWTAIIMGCAMHGHALDAVSLFEEMLVDGVKPCYVAFMAVLTACSHAGLVDEGWK 424

Query: 535 IFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIH 594
            F SM  D G  P  EHYA + D+LGRAG+LE+A +FI  +  EP  +VW  LL AC  H
Sbjct: 425 YFNSMQRDFGVAPGLEHYAAVADLLGRAGRLEEAYDFISNMGEEPTGSVWSTLLAACRAH 484

Query: 595 KDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTL 654
           K+  LA     K+  +DP N+G HV++SNIYSA + +  AA +R  ++K  L K P C+ 
Sbjct: 485 KNIELAEKVVNKILLVDPGNMGAHVIMSNIYSAAQRWRDAAKLRVRMRKTGLKKTPACSW 544

Query: 655 IEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMK 714
           IEVG   H F +GD+ HP    I   L  L  +M + G+  +T   LHDV+EE K  +++
Sbjct: 545 IEVGNKVHTFLAGDKSHPYYDKINEALNILLEQMEKEGYVLDTNEVLHDVDEEHKRDLLR 604

Query: 715 VHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFK 774
            HSE+LAIAFG+I+T  GT IR+IKN+RVC+DCHTA KF++K+ GR I+VRD +RFHHFK
Sbjct: 605 THSERLAIAFGIISTTSGTTIRVIKNIRVCVDCHTAIKFMAKIVGREIIVRDNSRFHHFK 664

Query: 775 GGVCSCGDYW 784
            G CSCGDYW
Sbjct: 665 NGSCSCGDYW 674



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 116/469 (24%), Positives = 229/469 (48%), Gaps = 39/469 (8%)

Query: 57  TCYARALFFSIPK-----PDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTY 111
           TC+ + L   I K     P    +  II+ ++++ + + S+  +  LR +  ++PD   +
Sbjct: 21  TCHVKQLHAQIVKTTKATPHSLAWICIIKCYASHGLLRHSLASFNLLR-SFGISPDRHLF 79

Query: 112 SFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFS-------------- 157
             +L A++     ++   LH   I  G+  DL+   AL+++Y KF               
Sbjct: 80  PSLLRASTLFKHFNLAQSLHAAVIRLGFHFDLYTANALMNMYSKFHPHLSPLHEFPQARH 139

Query: 158 --------WVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLD 209
                    + S RK+FD+MP +D V WN++I+G  +N  +++++ +  +M +      D
Sbjct: 140 NHNNKYSVKIDSVRKLFDRMPVRDVVSWNTVIAGNAQNGMYEEALNMVKEMGKE-NLRPD 198

Query: 210 STSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFR 269
           S +++++LP   E   +  G EI    ++ GF   V++ + L+  Y+KC +VE +   F 
Sbjct: 199 SFTLSSILPIFTEHANVTKGKEIHGYAIRHGFDKDVFIGSSLIDMYAKCTQVELSVCAFH 258

Query: 270 DIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHL 329
            +   D IS N++I+G   NG+ +  L  FR++L    +    +   +IP       L+L
Sbjct: 259 LLSNRDAISWNSIIAGCVQNGRFDQGLGFFRRMLKEKVKPMQVSFSSVIPACAHLTALNL 318

Query: 330 TNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFD--ESSEKSLASWNAMIAGY 387
              +H++ ++ G   N  + ++L  +Y++   ++ AR +F+  E  ++ + SW A+I G 
Sbjct: 319 GKQLHAYIIRLGFDDNKFIASSLLDMYAKCGNIKMARYIFNKIEMCDRDMVSWTAIIMGC 378

Query: 388 TQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLG-KWVHELVKSRNFESN 446
             +G   +A+SLF+EM    V P  V   ++L+AC+  G +  G K+ + + +       
Sbjct: 379 AMHGHALDAVSLFEEMLVDGVKPCYVAFMAVLTACSHAGLVDEGWKYFNSMQRDFGVAPG 438

Query: 447 IYVSTALIDMYAKCGNIVEARELFDLMSHKSE----VTWNTMISGYGLH 491
           +    A+ D+  + G + EA   +D +S+  E      W+T+++    H
Sbjct: 439 LEHYAAVADLLGRAGRLEEA---YDFISNMGEEPTGSVWSTLLAACRAH 484



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 117/454 (25%), Positives = 200/454 (44%), Gaps = 62/454 (13%)

Query: 8   SRNLFLSLLKGAK--TQSQLTQT-HAQIIIHGFQNDLSTVTKLAHRLSDFKATCY----- 59
            R+LF SLL+ +       L Q+ HA +I  GF  DL T   L +  S F          
Sbjct: 75  DRHLFPSLLRASTLFKHFNLAQSLHAAVIRLGFHFDLYTANALMNMYSKFHPHLSPLHEF 134

Query: 60  -----------------ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNT 102
                             R LF  +P  D+  +N +I G + N M + ++     + K  
Sbjct: 135 PQARHNHNNKYSVKIDSVRKLFDRMPVRDVVSWNTVIAGNAQNGMYEEALNMVKEMGKEN 194

Query: 103 ALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSA 162
            L PD+FT S +L   +   + + G  +HG+AI  G+  D+F+G++L+D+Y K + V+ +
Sbjct: 195 -LRPDSFTLSSILPIFTEHANVTKGKEIHGYAIRHGFDKDVFIGSSLIDMYAKCTQVELS 253

Query: 163 RKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAE 222
              F  +  +D + WNS+I+G ++N  F   +  F  M++     +   S ++V+PA A 
Sbjct: 254 VCAFHLLSNRDAISWNSIIAGCVQNGRFDQGLGFFRRMLKEKVKPM-QVSFSSVIPACAH 312

Query: 223 VQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDI--VRPDLISCN 280
           +  L LG ++    ++LGF D+ ++ + L+  Y+KCG ++ A  +F  I     D++S  
Sbjct: 313 LTALNLGKQLHAYIIRLGFDDNKFIASSLLDMYAKCGNIKMARYIFNKIEMCDRDMVSWT 372

Query: 281 AMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKS 340
           A+I G   +G    ++ LF ++L          + G+ P +  F  + LT C H+  +  
Sbjct: 373 AIIMGCAMHGHALDAVSLFEEML----------VDGVKPCYVAFMAV-LTACSHAGLVDE 421

Query: 341 GIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLF 400
           G              +   N M+      D      L  + A+     + G  EEA    
Sbjct: 422 G--------------WKYFNSMQR-----DFGVAPGLEHYAAVADLLGRAGRLEEAYDFI 462

Query: 401 QEMQASKVAPNPVTVSSILSACAQLGAISLGKWV 434
             M      P     S++L+AC     I L + V
Sbjct: 463 SNMGEE---PTGSVWSTLLAACRAHKNIELAEKV 493



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 60/244 (24%), Positives = 109/244 (44%), Gaps = 25/244 (10%)

Query: 371 ESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISL 430
           +++  SLA W  +I  Y  +GL   +++ F  +++  ++P+     S+L A       +L
Sbjct: 36  KATPHSLA-WICIIKCYASHGLLRHSLASFNLLRSFGISPDRHLFPSLLRASTLFKHFNL 94

Query: 431 GKWVHELVKSRNFESNIYVSTALIDMYAK----------------------CGNIVEARE 468
            + +H  V    F  ++Y + AL++MY+K                         I   R+
Sbjct: 95  AQSLHAAVIRLGFHFDLYTANALMNMYSKFHPHLSPLHEFPQARHNHNNKYSVKIDSVRK 154

Query: 469 LFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGL 528
           LFD M  +  V+WNT+I+G   +G   EAL +  EM    +RP   T  S+L   +    
Sbjct: 155 LFDRMPVRDVVSWNTVIAGNAQNGMYEEALNMVKEMGKENLRPDSFTLSSILPIFTEHAN 214

Query: 529 VREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALL 588
           V +G EI    I  HGF       + ++D+  +  Q+E ++     L+     + W +++
Sbjct: 215 VTKGKEIHGYAIR-HGFDKDVFIGSSLIDMYAKCTQVELSVCAFHLLSNRDAIS-WNSII 272

Query: 589 GACM 592
             C+
Sbjct: 273 AGCV 276


>gi|225459736|ref|XP_002284744.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
           [Vitis vinifera]
          Length = 758

 Score =  464 bits (1195), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 257/724 (35%), Positives = 384/724 (53%), Gaps = 71/724 (9%)

Query: 131 HGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCF 190
           H H + +G  +D  +   L+  Y        A  V D +PE +   ++++I    K   F
Sbjct: 36  HAHILKTGLFNDTHLATKLLSHYANNMCFADATLVLDLVPEPNVFSFSTLIYAFSKFHQF 95

Query: 191 QDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTG 250
             ++  F  M+  G    D+  + + + A A +  L+   ++  +    GF    +V + 
Sbjct: 96  HHALSTFSQMLTRG-LMPDNRVLPSAVKACAGLSALKPARQVHGIASVSGFDSDSFVQSS 154

Query: 251 LVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVN 310
           LV  Y KC ++  A  +F  +  PD++S +A+++ Y   G  + + RLF ++  S  + N
Sbjct: 155 LVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGCVDEAKRLFSEMGDSGVQPN 214

Query: 311 -----------------------------------SSTIVGLIPVFYPFGHLHLTNCIHS 335
                                               +TI  ++P       L +   IH 
Sbjct: 215 LISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDGTTISSVLPAVGDLEDLVMGILIHG 274

Query: 336 FCLKSGIVSNSSVLTALSTVY-------------------------------SRLNEMEA 364
           + +K G+VS+  V +AL  +Y                               SR  ++E+
Sbjct: 275 YVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQMDHMDVGSCNAFIFGLSRNGQVES 334

Query: 365 ARKLF----DESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILS 420
           + +LF    D+  E ++ SW +MIA  +QNG   EA+ LF+EMQ + V PN VT+  +L 
Sbjct: 335 SLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDIEALELFREMQIAGVKPNSVTIPCLLP 394

Query: 421 ACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVT 480
           AC  + A+  GK  H     R   +++YV +ALIDMYAKCG I  +R  FD +  K+ V 
Sbjct: 395 ACGNIAALMHGKAAHCFSLRRGISTDVYVGSALIDMYAKCGRIQASRICFDGIPTKNLVC 454

Query: 481 WNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMI 540
           WN +I+GY +HG   EA+++F  M  SG +P  ++F  VL ACS +GL  EG   F SM 
Sbjct: 455 WNAVIAGYAMHGKAKEAMEIFDLMQRSGQKPDIISFTCVLSACSQSGLTEEGSYYFNSMS 514

Query: 541 HDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLA 600
             +G +   EHYACMV +L RAG+LE+A   I+ + V P   VWGALL +C +H + +L 
Sbjct: 515 SKYGIEARVEHYACMVTLLSRAGKLEQAYAMIRRMPVNPDACVWGALLSSCRVHNNVSLG 574

Query: 601 RVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGT 660
            VA+EKLFEL+P N G ++LLSNIY+++  + +   VR ++K + L K PGC+ IEV   
Sbjct: 575 EVAAEKLFELEPSNPGNYILLSNIYASKGMWNEVNRVRDMMKNKGLRKNPGCSWIEVKNK 634

Query: 661 PHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKL 720
            H+  +GD+ HPQ T I   L+KL+ +M++ G+  E    L DVEE++KE ++  HSEKL
Sbjct: 635 VHMLLAGDKSHPQMTQIIEKLDKLSMEMKKLGYFPEINFVLQDVEEQDKEQILCGHSEKL 694

Query: 721 AIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSC 780
           A+ FGL+ T PG  +++IKNLR+C DCH   KFIS    R I VRD NRFHHFK G CSC
Sbjct: 695 AVVFGLLNTPPGYPLQVIKNLRICGDCHVVIKFISSFERREIFVRDTNRFHHFKEGACSC 754

Query: 781 GDYW 784
           GDYW
Sbjct: 755 GDYW 758



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 159/612 (25%), Positives = 270/612 (44%), Gaps = 84/612 (13%)

Query: 11  LFLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFS--IP 68
           +F  L     + SQ  Q HA I+  G  ND    TKL    ++    C+A A      +P
Sbjct: 18  IFNCLNSTTASLSQTRQAHAHILKTGLFNDTHLATKLLSHYAN--NMCFADATLVLDLVP 75

Query: 69  KPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGV 128
           +P++F F+ +I  FS       ++  ++ +     L PDN      + A +         
Sbjct: 76  EPNVFSFSTLIYAFSKFHQFHHALSTFSQMLTR-GLMPDNRVLPSAVKACAGLSALKPAR 134

Query: 129 LLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNC 188
            +HG A VSG+ SD FV ++LV +Y K + ++ A +VFD+M E D V W+++++   +  
Sbjct: 135 QVHGIASVSGFDSDSFVQSSLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQG 194

Query: 189 CFQDSIWVFGDMVRNG----------------------------------GTWLDSTSVA 214
           C  ++  +F +M  +G                                  G   D T+++
Sbjct: 195 CVDEAKRLFSEMGDSGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDGTTIS 254

Query: 215 AVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRP 274
           +VLPAV ++++L +G+ I    +K G      V + L+  Y KC        +F  +   
Sbjct: 255 SVLPAVGDLEDLVMGILIHGYVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQMDHM 314

Query: 275 DLISCNAMISGYTCNGKTESSLRLFRQL-------------------------------- 302
           D+ SCNA I G + NG+ ESSLRLFRQL                                
Sbjct: 315 DVGSCNAFIFGLSRNGQVESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDIEALELF 374

Query: 303 ---LASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRL 359
                +  + NS TI  L+P       L      H F L+ GI ++  V +AL  +Y++ 
Sbjct: 375 REMQIAGVKPNSVTIPCLLPACGNIAALMHGKAAHCFSLRRGISTDVYVGSALIDMYAKC 434

Query: 360 NEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSIL 419
             ++A+R  FD    K+L  WNA+IAGY  +G  +EA+ +F  MQ S   P+ ++ + +L
Sbjct: 435 GRIQASRICFDGIPTKNLVCWNAVIAGYAMHGKAKEAMEIFDLMQRSGQKPDIISFTCVL 494

Query: 420 SACAQLGAISLGKWVHELVKSR-NFESNIYVSTALIDMYAKCGNIVEARELFDLMS-HKS 477
           SAC+Q G    G +    + S+   E+ +     ++ + ++ G + +A  +   M  +  
Sbjct: 495 SACSQSGLTEEGSYYFNSMSSKYGIEARVEHYACMVTLLSRAGKLEQAYAMIRRMPVNPD 554

Query: 478 EVTWNTMISGYGLHGH---GLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDE 534
              W  ++S   +H +   G  A +   E+  S   P     LS +YA    G+  E + 
Sbjct: 555 ACVWGALLSSCRVHNNVSLGEVAAEKLFELEPS--NPGNYILLSNIYA--SKGMWNEVNR 610

Query: 535 IFQSMIHDHGFK 546
           + + M+ + G +
Sbjct: 611 V-RDMMKNKGLR 621



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 64/221 (28%), Positives = 117/221 (52%), Gaps = 1/221 (0%)

Query: 327 LHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAG 386
           L  T   H+  LK+G+ +++ + T L + Y+       A  + D   E ++ S++ +I  
Sbjct: 29  LSQTRQAHAHILKTGLFNDTHLATKLLSHYANNMCFADATLVLDLVPEPNVFSFSTLIYA 88

Query: 387 YTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESN 446
           +++      A+S F +M    + P+   + S + ACA L A+   + VH +     F+S+
Sbjct: 89  FSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKPARQVHGIASVSGFDSD 148

Query: 447 IYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLH 506
            +V ++L+ MY KC  I +A  +FD M     V+W+ +++ Y   G   EA +LFSEM  
Sbjct: 149 SFVQSSLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGCVDEAKRLFSEMGD 208

Query: 507 SGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKP 547
           SG++P+ +++  ++   +H+GL  E   +F  M H  GF+P
Sbjct: 209 SGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDM-HLRGFEP 248



 Score = 39.7 bits (91), Expect = 6.5,   Method: Compositional matrix adjust.
 Identities = 33/165 (20%), Positives = 69/165 (41%), Gaps = 2/165 (1%)

Query: 426 GAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMI 485
            ++S  +  H  +      ++ +++T L+  YA      +A  + DL+   +  +++T+I
Sbjct: 27  ASLSQTRQAHAHILKTGLFNDTHLATKLLSHYANNMCFADATLVLDLVPEPNVFSFSTLI 86

Query: 486 SGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGF 545
             +        AL  FS+ML  G+ P      S + AC+    ++   ++   +    GF
Sbjct: 87  YAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKPARQV-HGIASVSGF 145

Query: 546 KPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGA 590
              +   + +V +  +  Q+  A      +  EP    W AL+ A
Sbjct: 146 DSDSFVQSSLVHMYIKCNQIRDAHRVFDRM-FEPDVVSWSALVAA 189


>gi|297720883|ref|NP_001172804.1| Os02g0151000 [Oryza sativa Japonica Group]
 gi|51535971|dbj|BAD38052.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|218190072|gb|EEC72499.1| hypothetical protein OsI_05871 [Oryza sativa Indica Group]
 gi|255670608|dbj|BAH91533.1| Os02g0151000 [Oryza sativa Japonica Group]
          Length = 922

 Score =  464 bits (1194), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 264/758 (34%), Positives = 415/758 (54%), Gaps = 45/758 (5%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           AR LF  +P+ +L  + V+I G+   E    +   +  + +   L PD   ++  LSA  
Sbjct: 177 ARNLFEKMPERNLVSWTVMISGYGRIENHGKAWDIFCKMHRE-GLLPDQSNFASALSAVK 235

Query: 120 ACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFK-FSWVKSARKVFDKMPEKDTVLWN 178
              +  +   L   A+ +G+  D+ +G A++++Y +  S + +A K F+ M E++   W+
Sbjct: 236 GLGNLDVLESLRVLALKTGFERDVVIGTAILNVYSRDTSVLDTAIKFFESMIERNEYTWS 295

Query: 179 SMISGLMKNCCFQDSIWVFG-DMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGL 237
           +MI+ L        +I V+  D V++       T++   L     + + R+  E     +
Sbjct: 296 TMIAALSHGGRIDAAIAVYERDPVKSIAC---RTALITGLAQCGRIDDARILFEQIPEPI 352

Query: 238 KLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLR 297
            + ++        L++ Y + G V  A+ LF  +   + IS   MI+GY  NG++E +L 
Sbjct: 353 VVSWN-------ALITGYMQNGMVNEAKELFDKMPFRNTISWAGMIAGYAQNGRSEEALG 405

Query: 298 LFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYS 357
           L ++L  S    + S++  +         L     +HS  +K G   NS    AL T+Y 
Sbjct: 406 LLQELHRSGMLPSLSSLTSIFFACSNIVALETGTQVHSLAVKVGCQFNSFACNALITMYG 465

Query: 358 RLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEM-------------- 403
           +   ME AR++F     K + SWN+ +A   QN L +EA + F  M              
Sbjct: 466 KCRNMEYARQVFSRMVTKDIVSWNSFLAALVQNDLLDEARNTFDNMLSRDDVSWTTIISA 525

Query: 404 -----QASKVA------------PNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESN 446
                Q+++              PN   ++ +L  C  LGA  +G+ +H +      +S 
Sbjct: 526 YAHAEQSNEAMGAFKTMFCEHELPNSPILTILLGVCGSLGASKIGQQIHTVAIKLGMDSE 585

Query: 447 IYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLH 506
           + V+ ALI MY KCG   ++R +FDLM  +   TWNT+I+GY  HG G EA++++  M  
Sbjct: 586 LIVANALISMYFKCG-CADSRRIFDLMEERDIFTWNTIITGYAQHGLGREAIKMYQHMES 644

Query: 507 SGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLE 566
           +G+ P+ VTF+ +L ACSHAGLV EG + F+SM  D+G  PL EHYACMVD+LGR G ++
Sbjct: 645 AGVLPNEVTFVGLLNACSHAGLVDEGWKFFKSMSQDYGLTPLPEHYACMVDLLGRTGDVQ 704

Query: 567 KALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYS 626
            A +FI  + +EP   +W ALLGAC IHK+  + + A+EKLF ++P N G +V+LSNIYS
Sbjct: 705 GAEQFIYDMPIEPDTVIWSALLGACKIHKNAEIGKRAAEKLFRIEPSNAGNYVMLSNIYS 764

Query: 627 AERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNG 686
           +   + + A VR+++K++ + K PGC+  ++    H F +GD+ H Q   I A LE+L  
Sbjct: 765 SLGMWGEVAEVRKIMKQQGVIKEPGCSWTQIKDKMHSFVTGDKQHEQIEEIVATLEELYT 824

Query: 687 KMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLD 746
            ++  G+  +T   LHD++EE+KE  +  HSEKLA+A+ L+AT  G  I+I+KNLR+C D
Sbjct: 825 LLKATGYVPDTEFVLHDIDEEQKESSLLYHSEKLAVAYCLLATPKGMPIQILKNLRICGD 884

Query: 747 CHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           CHT  KF+S VT R I +RD NRFHHF+ G CSC D+W
Sbjct: 885 CHTFIKFVSHVTKRQIDIRDGNRFHHFRNGSCSCEDFW 922



 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 143/584 (24%), Positives = 250/584 (42%), Gaps = 81/584 (13%)

Query: 131 HGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCC- 189
           HG   VSG        A + DL  +   V  AR+VFD MP +D + WNSMIS    N   
Sbjct: 29  HGELEVSG------CSARIRDLG-RLGRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMP 81

Query: 190 -----FQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDH 244
                  D+I   G  +R G   L   S    L  V E + +  GM             +
Sbjct: 82  DAARDLYDAI--SGGNMRTGAILL---SGYGRLGRVLEARRVFDGM----------LERN 126

Query: 245 VYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQ--- 301
                 ++S Y + G++  A  LF  +   D+ S N+M++GY  + +   +  LF +   
Sbjct: 127 TVAWNAMISCYVQNGDITMARRLFDAMPSRDVSSWNSMLTGYCHSLQMVDARNLFEKMPE 186

Query: 302 --------LLASAERVNSSTIV----------GLIPVFYPF----------GHLHLTNCI 333
                   +++   R+ +              GL+P    F          G+L +   +
Sbjct: 187 RNLVSWTVMISGYGRIENHGKAWDIFCKMHREGLLPDQSNFASALSAVKGLGNLDVLESL 246

Query: 334 HSFCLKSGIVSNSSVLTALSTVYSR-LNEMEAARKLFDESSEKSLASWNAMIAGYTQNGL 392
               LK+G   +  + TA+  VYSR  + ++ A K F+   E++  +W+ MIA  +  G 
Sbjct: 247 RVLALKTGFERDVVIGTAILNVYSRDTSVLDTAIKFFESMIERNEYTWSTMIAALSHGGR 306

Query: 393 TEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTA 452
            + AI++++      +A      +++++  AQ G I   + + E +     E  +    A
Sbjct: 307 IDAAIAVYERDPVKSIACR----TALITGLAQCGRIDDARILFEQIP----EPIVVSWNA 358

Query: 453 LIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPS 512
           LI  Y + G + EA+ELFD M  ++ ++W  MI+GY  +G   EAL L  E+  SG+ PS
Sbjct: 359 LITGYMQNGMVNEAKELFDKMPFRNTISWAGMIAGYAQNGRSEEALGLLQELHRSGMLPS 418

Query: 513 GVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAE--HYAC--MVDILGRAGQLEKA 568
             +  S+ +ACS+   +  G     + +H    K   +   +AC  ++ + G+   +E A
Sbjct: 419 LSSLTSIFFACSNIVALETG-----TQVHSLAVKVGCQFNSFACNALITMYGKCRNMEYA 473

Query: 569 LEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAE 628
            +    + V      W + L A + +   + AR   + +   D  +V +  ++S    AE
Sbjct: 474 RQVFSRM-VTKDIVSWNSFLAALVQNDLLDEARNTFDNMLSRD--DVSWTTIISAYAHAE 530

Query: 629 RDYLQAATVRQVVKKRKLAKAPGCT-LIEVGGTPHVFTSGDQLH 671
           +        + +  + +L  +P  T L+ V G+      G Q+H
Sbjct: 531 QSNEAMGAFKTMFCEHELPNSPILTILLGVCGSLGASKIGQQIH 574


>gi|222622177|gb|EEE56309.1| hypothetical protein OsJ_05395 [Oryza sativa Japonica Group]
          Length = 922

 Score =  464 bits (1194), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 264/758 (34%), Positives = 415/758 (54%), Gaps = 45/758 (5%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           AR LF  +P+ +L  + V+I G+   E    +   +  + +   L PD   ++  LSA  
Sbjct: 177 ARNLFEKMPERNLVSWTVMISGYGRIENHGKAWDIFCKMHRE-GLLPDQSNFASALSAVK 235

Query: 120 ACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFK-FSWVKSARKVFDKMPEKDTVLWN 178
              +  +   L   A+ +G+  D+ +G A++++Y +  S + +A K F+ M E++   W+
Sbjct: 236 GLGNLDVLESLRVLALKTGFERDVVIGTAILNVYSRDTSVLDTAIKFFESMIERNEYTWS 295

Query: 179 SMISGLMKNCCFQDSIWVFG-DMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGL 237
           +MI+ L        +I V+  D V++       T++   L     + + R+  E     +
Sbjct: 296 TMIAALSHGGRIDAAIAVYERDPVKSIAC---RTALITGLAQCGRIDDARILFEQIPEPI 352

Query: 238 KLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLR 297
            + ++        L++ Y + G V  A+ LF  +   + IS   MI+GY  NG++E +L 
Sbjct: 353 VVSWN-------ALITGYMQNGMVNEAKELFDKMPFRNTISWAGMIAGYAQNGRSEEALG 405

Query: 298 LFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYS 357
           L ++L  S    + S++  +         L     +HS  +K G   NS    AL T+Y 
Sbjct: 406 LLQELHRSGMLPSLSSLTSIFFACSNIVALETGTQVHSLAVKVGCQFNSFACNALITMYG 465

Query: 358 RLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEM-------------- 403
           +   ME AR++F     K + SWN+ +A   QN L +EA + F  M              
Sbjct: 466 KCRNMEYARQVFSRMVTKDIVSWNSFLAALVQNDLLDEARNTFDNMLSRDDVSWTTIISA 525

Query: 404 -----QASKVA------------PNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESN 446
                Q+++              PN   ++ +L  C  LGA  +G+ +H +      +S 
Sbjct: 526 YAHAEQSNEAMGAFKTMFCEHELPNSPILTILLGVCGSLGASKIGQQIHTVAIKLGMDSE 585

Query: 447 IYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLH 506
           + V+ ALI MY KCG   ++R +FDLM  +   TWNT+I+GY  HG G EA++++  M  
Sbjct: 586 LIVANALISMYFKCG-CADSRRIFDLMEERDIFTWNTIITGYAQHGLGREAIKMYQHMES 644

Query: 507 SGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLE 566
           +G+ P+ VTF+ +L ACSHAGLV EG + F+SM  D+G  PL EHYACMVD+LGR G ++
Sbjct: 645 AGVLPNEVTFVGLLNACSHAGLVDEGWKFFKSMSQDYGLTPLPEHYACMVDLLGRTGDVQ 704

Query: 567 KALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYS 626
            A +FI  + +EP   +W ALLGAC IHK+  + + A+EKLF ++P N G +V+LSNIYS
Sbjct: 705 GAEQFIYDMPIEPDTVIWSALLGACKIHKNAEIGKRAAEKLFRIEPSNAGNYVMLSNIYS 764

Query: 627 AERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNG 686
           +   + + A VR+++K++ + K PGC+  ++    H F +GD+ H Q   I A LE+L  
Sbjct: 765 SLGMWGEVAEVRKIMKQQGVIKEPGCSWTQIKDKMHSFVTGDKQHEQIEEIVATLEELYT 824

Query: 687 KMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLD 746
            ++  G+  +T   LHD++EE+KE  +  HSEKLA+A+ L+AT  G  I+I+KNLR+C D
Sbjct: 825 LLKATGYVPDTEFVLHDIDEEQKESSLLYHSEKLAVAYCLLATPKGMPIQILKNLRICGD 884

Query: 747 CHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           CHT  KF+S VT R I +RD NRFHHF+ G CSC D+W
Sbjct: 885 CHTFIKFVSHVTKRQIDIRDGNRFHHFRNGSCSCEDFW 922



 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 143/584 (24%), Positives = 250/584 (42%), Gaps = 81/584 (13%)

Query: 131 HGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCC- 189
           HG   VSG        A + DL  +   V  AR+VFD MP +D + WNSMIS    N   
Sbjct: 29  HGELEVSG------CSARIRDLG-RLGRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMP 81

Query: 190 -----FQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDH 244
                  D+I   G  +R G   L   S    L  V E + +  GM             +
Sbjct: 82  DAARDLYDAI--SGGNMRTGAILL---SGYGRLGRVLEARRVFDGM----------LERN 126

Query: 245 VYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQ--- 301
                 ++S Y + G++  A  LF  +   D+ S N+M++GY  + +   +  LF +   
Sbjct: 127 TVAWNAMISCYVQNGDITMARRLFDAMPSRDVSSWNSMLTGYCHSLQMVDARNLFEKMPE 186

Query: 302 --------LLASAERVNSSTIV----------GLIPVFYPF----------GHLHLTNCI 333
                   +++   R+ +              GL+P    F          G+L +   +
Sbjct: 187 RNLVSWTVMISGYGRIENHGKAWDIFCKMHREGLLPDQSNFASALSAVKGLGNLDVLESL 246

Query: 334 HSFCLKSGIVSNSSVLTALSTVYSR-LNEMEAARKLFDESSEKSLASWNAMIAGYTQNGL 392
               LK+G   +  + TA+  VYSR  + ++ A K F+   E++  +W+ MIA  +  G 
Sbjct: 247 RVLALKTGFERDVVIGTAILNVYSRDTSVLDTAIKFFESMIERNEYTWSTMIAALSHGGR 306

Query: 393 TEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTA 452
            + AI++++      +A      +++++  AQ G I   + + E +     E  +    A
Sbjct: 307 IDAAIAVYERDPVKSIACR----TALITGLAQCGRIDDARILFEQIP----EPIVVSWNA 358

Query: 453 LIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPS 512
           LI  Y + G + EA+ELFD M  ++ ++W  MI+GY  +G   EAL L  E+  SG+ PS
Sbjct: 359 LITGYMQNGMVNEAKELFDKMPFRNTISWAGMIAGYAQNGRSEEALGLLQELHRSGMLPS 418

Query: 513 GVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAE--HYAC--MVDILGRAGQLEKA 568
             +  S+ +ACS+   +  G     + +H    K   +   +AC  ++ + G+   +E A
Sbjct: 419 LSSLTSIFFACSNIVALETG-----TQVHSLAVKVGCQFNSFACNALITMYGKCRNMEYA 473

Query: 569 LEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAE 628
            +    + V      W + L A + +   + AR   + +   D  +V +  ++S    AE
Sbjct: 474 RQVFSRM-VTKDIVSWNSFLAALVQNDLLDEARNTFDNMLSRD--DVSWTTIISAYAHAE 530

Query: 629 RDYLQAATVRQVVKKRKLAKAPGCT-LIEVGGTPHVFTSGDQLH 671
           +        + +  + +L  +P  T L+ V G+      G Q+H
Sbjct: 531 QSNEAMGAFKTMFCEHELPNSPILTILLGVCGSLGASKIGQQIH 574


>gi|449436591|ref|XP_004136076.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
           chloroplastic-like [Cucumis sativus]
          Length = 878

 Score =  464 bits (1194), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 256/725 (35%), Positives = 409/725 (56%), Gaps = 9/725 (1%)

Query: 63  LFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACC 122
           +F  + + D+F +NV++ G++       ++  Y H      + P+ +T+  VL   +   
Sbjct: 154 VFGKMSERDVFSWNVLVGGYAKAGCFDEALNLY-HRMLWAEIRPNVYTFPSVLKTCAGVS 212

Query: 123 DRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMIS 182
           D + G  +H H I  G+ SD+ VG AL+ +Y K   + +AR +FDKMP++D + WN+MIS
Sbjct: 213 DIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISNARMLFDKMPKRDRISWNAMIS 272

Query: 183 GLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFH 242
           G  +N    + + +F  M+R      D  ++  V  A   +   RLG  +    +K  F 
Sbjct: 273 GYFENGGGLEGLELFS-MMRELSVDPDLITMTTVASACELLDNERLGRGVHGYVVKSEFG 331

Query: 243 DHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQL 302
             + +   L+  YS  G +E AE +F  +   D++S  AMI+    +     ++  ++ +
Sbjct: 332 GDISMNNSLIQMYSSLGRLEEAETVFSRMESKDVVSWTAMIASLVSHKLPFKAVETYKMM 391

Query: 303 LASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEM 362
                  +  T+V ++      GHL L   +H   +K+G+VS+  V  +L  +YS+   +
Sbjct: 392 ELEGILPDEITLVSVLSACACIGHLDLGIRLHEIAIKTGLVSHVIVSNSLIDMYSKCKCV 451

Query: 363 EAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSAC 422
           + A ++F   S K++ SW ++I G   N  + EA+  F++M+ S + PN VT+ S+LSAC
Sbjct: 452 DNALEVFRNISGKNVVSWTSLILGLRINNRSFEALLFFRQMKES-MKPNSVTLISVLSAC 510

Query: 423 AQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVT-W 481
           A++GA+  GK +H          + ++  A++DMY +CG  V A   F+  S K +VT W
Sbjct: 511 ARIGALMRGKEIHAHALRTGVGFDGFLPNAILDMYVRCGRKVPALNQFN--SQKKDVTAW 568

Query: 482 NTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIH 541
           N +++GY   G    A++LF +ML   I P  +TF+S+L ACS +G+V EG E F  M +
Sbjct: 569 NILLTGYAQQGQAKLAVELFDKMLELEIHPDEITFISLLCACSKSGMVTEGLEYFNIMKN 628

Query: 542 DHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLAR 601
            +   P  +HYAC+VDILGRAGQL+ A +FI+ + + P  A+WGALL AC IH++  L  
Sbjct: 629 KYNLTPNLKHYACVVDILGRAGQLDDAYDFIQDMPIRPDAAIWGALLNACRIHRNVELGE 688

Query: 602 VASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTP 661
           +A++++FE D ++VGY++LL N+Y+   ++ + + VR ++++R L+  PGC+ +E+ G  
Sbjct: 689 IAAKRVFEKDNKSVGYYILLCNLYAGCGNWDKVSKVRSLMRERGLSADPGCSWVEIKGKV 748

Query: 662 HVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLA 721
           H F SGD  H QS  I  +L+    KM+E GF     +   ++E    ++    HSE+ A
Sbjct: 749 HAFLSGDNSHSQSKEINGVLDGFCSKMKENGFGNLKSSFTSEIESSRADIFCG-HSERQA 807

Query: 722 IAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCG 781
           IAFGLI T PG  I + KNL +C  CH   KFIS +  R I VRD   +HHFK GVCSCG
Sbjct: 808 IAFGLINTAPGMPIWVTKNLYMCHSCHNMVKFISTIVRREISVRDVEEYHHFKDGVCSCG 867

Query: 782 D--YW 784
           D  YW
Sbjct: 868 DEGYW 872



 Score =  216 bits (551), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 148/490 (30%), Positives = 243/490 (49%), Gaps = 29/490 (5%)

Query: 145 VGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNG 204
           +G AL+ ++ +F  +  A  VF KM E+D   WN ++ G  K  CF +++ ++  M+   
Sbjct: 134 LGNALLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRML--- 190

Query: 205 GTWLDSTSVAAVLPAV----AEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGE 260
             W +        P+V    A V ++  G EI    ++ GF   V V   L++ Y KCG+
Sbjct: 191 --WAEIRPNVYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGD 248

Query: 261 VERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLF---RQLLASAERVNSSTIVGL 317
           +  A +LF  + + D IS NAMISGY  NG     L LF   R+L    + +  +T+   
Sbjct: 249 ISNARMLFDKMPKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASA 308

Query: 318 IPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSL 377
             +     +  L   +H + +KS    + S+  +L  +YS L  +E A  +F     K +
Sbjct: 309 CEL---LDNERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRMESKDV 365

Query: 378 ASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHEL 437
            SW AMIA    + L  +A+  ++ M+   + P+ +T+ S+LSACA +G + LG  +HE+
Sbjct: 366 VSWTAMIASLVSHKLPFKAVETYKMMELEGILPDEITLVSVLSACACIGHLDLGIRLHEI 425

Query: 438 VKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEA 497
                  S++ VS +LIDMY+KC  +  A E+F  +S K+ V+W ++I G  ++    EA
Sbjct: 426 AIKTGLVSHVIVSNSLIDMYSKCKCVDNALEVFRNISGKNVVSWTSLILGLRINNRSFEA 485

Query: 498 LQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEI----FQSMIHDHGFKPLAEHYA 553
           L  F +M  S ++P+ VT +SVL AC+  G +  G EI     ++ +   GF P A    
Sbjct: 486 LLFFRQMKES-MKPNSVTLISVLSACARIGALMRGKEIHAHALRTGVGFDGFLPNA---- 540

Query: 554 CMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELD-- 611
            ++D+  R G+   AL      + +     W  LL          LA    +K+ EL+  
Sbjct: 541 -ILDMYVRCGRKVPALNQFN--SQKKDVTAWNILLTGYAQQGQAKLAVELFDKMLELEIH 597

Query: 612 PENVGYHVLL 621
           P+ + +  LL
Sbjct: 598 PDEITFISLL 607



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 50/178 (28%), Positives = 84/178 (47%), Gaps = 1/178 (0%)

Query: 391 GLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVS 450
           G  E+A+   + M   ++        ++L  C    A   G  V+ELV S      + + 
Sbjct: 76  GNLEQAMKRLESMLELRIEVEEDAYIALLRLCEWRRAPDEGSRVYELVSSSKSCLCVRLG 135

Query: 451 TALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIR 510
            AL+ M+ + GN+++A  +F  MS +   +WN ++ GY   G   EAL L+  ML + IR
Sbjct: 136 NALLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLWAEIR 195

Query: 511 PSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKA 568
           P+  TF SVL  C+    +  G EI   +I   GF+   +    ++ +  + G +  A
Sbjct: 196 PNVYTFPSVLKTCAGVSDIARGKEIHAHVIR-FGFESDVDVGNALITMYVKCGDISNA 252


>gi|357167109|ref|XP_003581008.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Brachypodium distachyon]
          Length = 921

 Score =  464 bits (1193), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 263/756 (34%), Positives = 412/756 (54%), Gaps = 47/756 (6%)

Query: 63  LFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACC 122
           LF  +P+ +L  + V+I G+   E        +  +    A +PD   ++ VLSA +   
Sbjct: 179 LFKQMPQRNLVTWTVMISGYVRIEQHGKGWDIFRMMHHEGA-SPDQSNFASVLSAVTGLQ 237

Query: 123 DRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFK-FSWVKSARKVFDKMPEKDTVLWNSMI 181
           D  +  +L    + +G+ SD+ +G +++++Y +  S +  A K FD M E++   W++MI
Sbjct: 238 DLGVLEVLRPLVLKTGFESDVVIGTSILNVYTRDASALDIAIKFFDGMVERNEYTWSTMI 297

Query: 182 SGLMKNCCFQDSIWVFG-DMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLG 240
           + L        +I V+G D V++  +    T++   L     + E R+  E         
Sbjct: 298 AALSHGGRIDAAIAVYGRDPVKSIPS---QTALLTGLARCGRITEARILFE--------Q 346

Query: 241 FHDHVYV-LTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLF 299
             D + V    +++ Y + G V+ A+ LF  +   + IS   MI+GY  NG++E +L L 
Sbjct: 347 IPDPIVVSWNAMITGYMQNGMVDEAKELFDRMPFRNTISWAGMIAGYAQNGRSEEALDLL 406

Query: 300 RQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRL 359
           + L  +    + S++          G L     +HS  +K+G   NS V  AL ++Y + 
Sbjct: 407 QALHRNGMLPSLSSLTSSFLACSHIGALETGRQVHSLAVKAGCQFNSYVCNALISMYGKC 466

Query: 360 NEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVA---------- 409
             ME  R++F+    K   SWN+ IA   QN + E+A  +F  M +  V           
Sbjct: 467 RNMEYVRQVFNRMRVKDTVSWNSFIAALVQNNMLEDARHIFDNMLSRDVVSWTTIISAYA 526

Query: 410 ---------------------PNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIY 448
                                PN   ++ +LS C  LG+  LG+ +H +      +S + 
Sbjct: 527 QAERGDEAVEFFKTMLHEHEKPNSPILTILLSVCGGLGSAKLGQQIHTVAIKHGMDSELI 586

Query: 449 VSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSG 508
           V+ AL+ MY KCG   ++ ++FD M  +   TWNT I+G   HG G EA++++  M   G
Sbjct: 587 VANALMSMYFKCG-CADSHKVFDSMEERDIFTWNTFITGCAQHGLGREAIKMYEHMESVG 645

Query: 509 IRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKA 568
           + P+ VTF+ +L ACSHAGLV EG + F+SM  D+G  PL EHYACMVD+LGR G ++ A
Sbjct: 646 VLPNEVTFVGLLNACSHAGLVDEGWQFFKSMSRDYGLTPLLEHYACMVDLLGRTGDVQGA 705

Query: 569 LEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAE 628
            +FI  + +EP   +W ALLGAC IHK+  + R A+EKLF  +P N G +V+LSNIYS+ 
Sbjct: 706 EKFIYDMPIEPDTVIWSALLGACKIHKNAEIGRRAAEKLFTTEPSNAGNYVMLSNIYSSL 765

Query: 629 RDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKM 688
             +++ A +R+++K+R ++K PGC+ +++    H F +GD+ H +   I   L+ L   +
Sbjct: 766 GMWVEVAELRKIMKQRGVSKEPGCSWMQIRNKVHSFVTGDKQHEKIEEIDYTLQDLYTLL 825

Query: 689 REAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCH 748
           R  G+  +T   LHD++EE+KE  +  HSEKLA+A+GL+ T  G  I+I+KNLR+C DCH
Sbjct: 826 RGTGYVPDTEFVLHDIDEEQKESSLLYHSEKLAVAYGLLVTPKGMPIQIMKNLRICGDCH 885

Query: 749 TATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           T  KF+S VT R I +RD NRFHHF+ G CSCGD+W
Sbjct: 886 TFIKFVSHVTKRDIDIRDGNRFHHFRNGSCSCGDFW 921



 Score =  125 bits (315), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 130/555 (23%), Positives = 239/555 (43%), Gaps = 72/555 (12%)

Query: 159 VKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLP 218
           ++ AR+VFD MP +D + WNSMIS    +   +D+  +F D +  G       +   +L 
Sbjct: 49  LREAREVFDAMPHRDIIAWNSMISAYCNSGMLEDARILF-DAISGGNV----RTATILLS 103

Query: 219 AVAEVQELRLGMEIQCLGLKLGFHDHVYV-LTGLVSFYSKCGEVERAELLFRDIVRPDLI 277
             A     RLG  +    +  G  +   V    +VS Y + G++  A  LF  +   D+ 
Sbjct: 104 GYA-----RLGRVLDARRVFDGMPERNTVAWNAMVSCYVQNGDITMARRLFDAMPSRDVT 158

Query: 278 SCNAMISGYTCNGKTESSLRLFRQLL---------------------------------- 303
           S N+M++GY  + +   +  LF+Q+                                   
Sbjct: 159 SWNSMVTGYCHSRQMVDAWNLFKQMPQRNLVTWTVMISGYVRIEQHGKGWDIFRMMHHEG 218

Query: 304 ASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSR-LNEM 362
           AS ++ N ++++  +      G L +   +    LK+G  S+  + T++  VY+R  + +
Sbjct: 219 ASPDQSNFASVLSAVTGLQDLGVLEV---LRPLVLKTGFESDVVIGTSILNVYTRDASAL 275

Query: 363 EAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSAC 422
           + A K FD   E++  +W+ MIA  +  G  + AI+++       +       +++L+  
Sbjct: 276 DIAIKFFDGMVERNEYTWSTMIAALSHGGRIDAAIAVYGRDPVKSIPSQ----TALLTGL 331

Query: 423 AQLGAISLGKWVHELVKSRNFESNIYVS-TALIDMYAKCGNIVEARELFDLMSHKSEVTW 481
           A+ G I+  + + E +        I VS  A+I  Y + G + EA+ELFD M  ++ ++W
Sbjct: 332 ARCGRITEARILFEQIP-----DPIVVSWNAMITGYMQNGMVDEAKELFDRMPFRNTISW 386

Query: 482 NTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIH 541
             MI+GY  +G   EAL L   +  +G+ PS  +  S   ACSH G +  G +     +H
Sbjct: 387 AGMIAGYAQNGRSEEALDLLQALHRNGMLPSLSSLTSSFLACSHIGALETGRQ-----VH 441

Query: 542 DHGFKPLAE--HYAC--MVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDT 597
               K   +   Y C  ++ + G+   +E   +    + V+     W + + A + +   
Sbjct: 442 SLAVKAGCQFNSYVCNALISMYGKCRNMEYVRQVFNRMRVKD-TVSWNSFIAALVQNNML 500

Query: 598 NLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCT-LIE 656
             AR   + +   D   V +  ++S    AER        + ++ + +   +P  T L+ 
Sbjct: 501 EDARHIFDNMLSRDV--VSWTTIISAYAQAERGDEAVEFFKTMLHEHEKPNSPILTILLS 558

Query: 657 VGGTPHVFTSGDQLH 671
           V G       G Q+H
Sbjct: 559 VCGGLGSAKLGQQIH 573



 Score = 93.2 bits (230), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 81/365 (22%), Positives = 164/365 (44%), Gaps = 22/365 (6%)

Query: 208 LDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELL 267
           LD ++ +A +  +A +  LR   E+         H  +     ++S Y   G +E A +L
Sbjct: 31  LDKSAHSARIRELARLGRLREAREV----FDAMPHRDIIAWNSMISAYCNSGMLEDARIL 86

Query: 268 FRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHL 327
           F  I   ++ +   ++SGY   G+   + R+F  +    ER N+     ++  +   G +
Sbjct: 87  FDAISGGNVRTATILLSGYARLGRVLDARRVFDGM---PER-NTVAWNAMVSCYVQNGDI 142

Query: 328 HLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGY 387
            +   +        + S +S++T     Y    +M  A  LF +  +++L +W  MI+GY
Sbjct: 143 TMARRLFDAMPSRDVTSWNSMVTG----YCHSRQMVDAWNLFKQMPQRNLVTWTVMISGY 198

Query: 388 TQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNI 447
            +     +   +F+ M     +P+    +S+LSA   L  + + + +  LV    FES++
Sbjct: 199 VRIEQHGKGWDIFRMMHHEGASPDQSNFASVLSAVTGLQDLGVLEVLRPLVLKTGFESDV 258

Query: 448 YVSTALIDMYAKCGNIVE-ARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLH 506
            + T+++++Y +  + ++ A + FD M  ++E TW+TMI+     G    A+ ++     
Sbjct: 259 VIGTSILNVYTRDASALDIAIKFFDGMVERNEYTWSTMIAALSHGGRIDAAIAVYGRDPV 318

Query: 507 SGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLE 566
             I PS    L+ L  C   G + E   +F+ +       P+   +  M+    + G ++
Sbjct: 319 KSI-PSQTALLTGLARC---GRITEARILFEQIP-----DPIVVSWNAMITGYMQNGMVD 369

Query: 567 KALEF 571
           +A E 
Sbjct: 370 EAKEL 374


>gi|449491114|ref|XP_004158804.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g15510, chloroplastic-like [Cucumis sativus]
          Length = 878

 Score =  464 bits (1193), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 256/725 (35%), Positives = 409/725 (56%), Gaps = 9/725 (1%)

Query: 63  LFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACC 122
           +F  + + D+F +NV++ G++       ++  Y H      + P+ +T+  VL   +   
Sbjct: 154 VFGKMSERDVFSWNVLVGGYAKAGCFDEALNLY-HRMLWAEIRPNVYTFPSVLKTCAGVS 212

Query: 123 DRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMIS 182
           D + G  +H H I  G+ SD+ VG AL+ +Y K   + +AR +FDKMP++D + WN+MIS
Sbjct: 213 DIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISNARMLFDKMPKRDRISWNAMIS 272

Query: 183 GLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFH 242
           G  +N    + + +F  M+R      D  ++  V  A   +   RLG  +    +K  F 
Sbjct: 273 GYFENGGGLEGLELFS-MMRELSVDPDLITMTTVASACELLDNERLGRGVHGYVVKSEFG 331

Query: 243 DHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQL 302
             + +   L+  YS  G +E AE +F  +   D++S  AMI+    +     ++  ++ +
Sbjct: 332 GDISMNNSLIQMYSSLGRLEEAETVFSRMESKDVVSWTAMIASLVSHKLPFKAVETYKMM 391

Query: 303 LASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEM 362
                  +  T+V ++      GHL L   +H   +K+G+VS+  V  +L  +YS+   +
Sbjct: 392 ELEGILPDEITLVSVLSACACIGHLDLGIRLHEIAIKTGLVSHVIVSNSLIDMYSKCKCV 451

Query: 363 EAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSAC 422
           + A ++F   S K++ SW ++I G   N  + EA+  F++M+ S + PN VT+ S+LSAC
Sbjct: 452 DNALEVFRNISGKNVVSWTSLILGLRINNRSFEALLFFRQMKES-MKPNSVTLISVLSAC 510

Query: 423 AQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVT-W 481
           A++GA+  GK +H          + ++  A++DMY +CG  V A   F+  S K +VT W
Sbjct: 511 ARIGALMRGKEIHAHALRTGVGFDGFLPNAILDMYVRCGRKVPALNQFN--SQKKDVTAW 568

Query: 482 NTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIH 541
           N +++GY   G    A++LF +ML   I P  +TF+S+L ACS +G+V EG E F  M +
Sbjct: 569 NILLTGYAQQGQAKLAVELFDKMLELEIHPDEITFISLLCACSKSGMVTEGLEYFNIMKN 628

Query: 542 DHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLAR 601
            +   P  +HYAC+VDILGRAGQL+ A +FI+ + + P  A+WGALL AC IH++  L  
Sbjct: 629 KYNLTPNLKHYACVVDILGRAGQLDDAYDFIQDMPIRPDAAIWGALLNACRIHRNVELGE 688

Query: 602 VASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTP 661
           +A++++FE D ++VGY++LL N+Y+   ++ + + VR ++++R L+  PGC+ +E+ G  
Sbjct: 689 IAAKRVFEKDNKSVGYYILLCNLYAGCGNWDKVSKVRSLMRERGLSADPGCSWVEIKGKV 748

Query: 662 HVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLA 721
           H F SGD  H QS  I  +L+    KM+E GF     +   ++E    ++    HSE+ A
Sbjct: 749 HAFLSGDNSHSQSKEINGVLDGFCSKMKENGFGNLKSSFTSEIESSRADIFCG-HSERQA 807

Query: 722 IAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCG 781
           IAFGLI T PG  I + KNL +C  CH   KFIS +  R I VRD   +HHFK GVCSCG
Sbjct: 808 IAFGLINTAPGMPIWVXKNLYMCHSCHNMVKFISTIVRREISVRDVEEYHHFKDGVCSCG 867

Query: 782 D--YW 784
           D  YW
Sbjct: 868 DEGYW 872



 Score =  216 bits (551), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 148/490 (30%), Positives = 243/490 (49%), Gaps = 29/490 (5%)

Query: 145 VGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNG 204
           +G AL+ ++ +F  +  A  VF KM E+D   WN ++ G  K  CF +++ ++  M+   
Sbjct: 134 LGNALLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRML--- 190

Query: 205 GTWLDSTSVAAVLPAV----AEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGE 260
             W +        P+V    A V ++  G EI    ++ GF   V V   L++ Y KCG+
Sbjct: 191 --WAEIRPNVYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGD 248

Query: 261 VERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLF---RQLLASAERVNSSTIVGL 317
           +  A +LF  + + D IS NAMISGY  NG     L LF   R+L    + +  +T+   
Sbjct: 249 ISNARMLFDKMPKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASA 308

Query: 318 IPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSL 377
             +     +  L   +H + +KS    + S+  +L  +YS L  +E A  +F     K +
Sbjct: 309 CEL---LDNERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRMESKDV 365

Query: 378 ASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHEL 437
            SW AMIA    + L  +A+  ++ M+   + P+ +T+ S+LSACA +G + LG  +HE+
Sbjct: 366 VSWTAMIASLVSHKLPFKAVETYKMMELEGILPDEITLVSVLSACACIGHLDLGIRLHEI 425

Query: 438 VKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEA 497
                  S++ VS +LIDMY+KC  +  A E+F  +S K+ V+W ++I G  ++    EA
Sbjct: 426 AIKTGLVSHVIVSNSLIDMYSKCKCVDNALEVFRNISGKNVVSWTSLILGLRINNRSFEA 485

Query: 498 LQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEI----FQSMIHDHGFKPLAEHYA 553
           L  F +M  S ++P+ VT +SVL AC+  G +  G EI     ++ +   GF P A    
Sbjct: 486 LLFFRQMKES-MKPNSVTLISVLSACARIGALMRGKEIHAHALRTGVGFDGFLPNA---- 540

Query: 554 CMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELD-- 611
            ++D+  R G+   AL      + +     W  LL          LA    +K+ EL+  
Sbjct: 541 -ILDMYVRCGRKVPALNQFN--SQKKDVTAWNILLTGYAQQGQAKLAVELFDKMLELEIH 597

Query: 612 PENVGYHVLL 621
           P+ + +  LL
Sbjct: 598 PDEITFISLL 607



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 50/178 (28%), Positives = 84/178 (47%), Gaps = 1/178 (0%)

Query: 391 GLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVS 450
           G  E+A+   + M   ++        ++L  C    A   G  V+ELV S      + + 
Sbjct: 76  GNLEQAMKRLESMLELRIEVEEDAYIALLRLCEWRRAPDEGSRVYELVSSSKSCLCVRLG 135

Query: 451 TALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIR 510
            AL+ M+ + GN+++A  +F  MS +   +WN ++ GY   G   EAL L+  ML + IR
Sbjct: 136 NALLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLWAEIR 195

Query: 511 PSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKA 568
           P+  TF SVL  C+    +  G EI   +I   GF+   +    ++ +  + G +  A
Sbjct: 196 PNVYTFPSVLKTCAGVSDIARGKEIHAHVIR-FGFESDVDVGNALITMYVKCGDISNA 252


>gi|357138408|ref|XP_003570784.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930-like [Brachypodium distachyon]
          Length = 750

 Score =  464 bits (1193), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 243/693 (35%), Positives = 379/693 (54%), Gaps = 33/693 (4%)

Query: 125 SIGVLLHGHAIVSGY-GSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISG 183
           S G+L H   +     G +L  G +L+    +   V+   ++F  +P++D V +N++++G
Sbjct: 58  SSGLLPHARRVFDAMPGRNLVTGNSLLSALARAGLVRDMERLFTSLPQRDAVSYNALLAG 117

Query: 184 LMKNCCFQDSIWVFGDMVRN-GGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFH 242
             +      +   +  ++R+  G      +++ V+   + + +  LG ++ C  L+LGF 
Sbjct: 118 FSRAGAHARAAGAYVALLRDEAGVRPSRITMSGVVMVASALGDRALGRQVHCQILRLGFG 177

Query: 243 DHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGY---------------- 286
            + +  + LV  Y+K G +  A  +F ++   +++ CN MI+G                 
Sbjct: 178 AYAFTGSPLVDMYAKVGPIGDARRVFDEMEGKNVVMCNTMITGLLRCKMVAEARALFEAI 237

Query: 287 ---------------TCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTN 331
                          T NG    +L +FR++ A    ++  T   ++        L    
Sbjct: 238 EERDSITWTTMVTGLTQNGLESEALDVFRRMRAEGVGIDQYTFGSILTACGALAALEEGK 297

Query: 332 CIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNG 391
            IH++  ++    N  V +AL  +YS+   +  A  +F     K++ SW AMI GY QNG
Sbjct: 298 QIHAYITRTCYEDNVFVGSALVDMYSKCRSVRLAEAVFRRMMWKNIISWTAMIVGYGQNG 357

Query: 392 LTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVST 451
             EEA+ +F EMQ   + P+  T+ S++S+CA L ++  G   H L         + VS 
Sbjct: 358 CGEEAVRVFSEMQRDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLRPYVTVSN 417

Query: 452 ALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRP 511
           AL+ +Y KCG+I +A  LFD MS   +V+W  ++ GY   G   E + LF +ML  G++P
Sbjct: 418 ALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVMGYAQFGKAKETIDLFEKMLSKGVKP 477

Query: 512 SGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEF 571
            GVTF+ VL ACS +GLV +G   F SM  DH   PL +HY CM+D+  R+G L++A EF
Sbjct: 478 DGVTFIGVLSACSRSGLVDKGRSYFHSMQQDHDIVPLDDHYTCMIDLYSRSGWLKQAEEF 537

Query: 572 IKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDY 631
           IK +   P    W  LL AC +  D  + + A+E L +LDP+N   +VLL ++++++ ++
Sbjct: 538 IKQMPRCPDAFGWATLLSACRLRGDMEIGKWAAENLLKLDPQNPASYVLLCSMHASKGEW 597

Query: 632 LQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREA 691
              A +R+ ++ R++ K PGC+ I+     H+F++ DQ HP S  IY  L+ LN KM E 
Sbjct: 598 NDVAKLRRGMRDRQVKKEPGCSWIKYKNKVHIFSADDQSHPFSRTIYEKLQWLNSKMVEE 657

Query: 692 GFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTAT 751
           G++ +  + LHDV + EK  M+  HSEKLAIAFGLI   P   IRI+KNLRVC+DCH AT
Sbjct: 658 GYKPDVSSVLHDVADAEKVHMLSHHSEKLAIAFGLIFVPPEMPIRIVKNLRVCVDCHNAT 717

Query: 752 KFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           KFISK+TGR I+VRDA RFH F  G+CSCGD+W
Sbjct: 718 KFISKITGRDILVRDAVRFHKFSNGICSCGDFW 750



 Score =  209 bits (531), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 137/464 (29%), Positives = 222/464 (47%), Gaps = 35/464 (7%)

Query: 63  LFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHL-RKNTALTPDNFTYSFVLSAASAC 121
           LF S+P+ D   +N ++ GFS       +   Y  L R    + P   T S V+  ASA 
Sbjct: 99  LFTSLPQRDAVSYNALLAGFSRAGAHARAAGAYVALLRDEAGVRPSRITMSGVVMVASAL 158

Query: 122 CDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKM------------ 169
            DR++G  +H   +  G+G+  F G+ LVD+Y K   +  AR+VFD+M            
Sbjct: 159 GDRALGRQVHCQILRLGFGAYAFTGSPLVDMYAKVGPIGDARRVFDEMEGKNVVMCNTMI 218

Query: 170 -------------------PEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDS 210
                               E+D++ W +M++GL +N    +++ VF  M R  G  +D 
Sbjct: 219 TGLLRCKMVAEARALFEAIEERDSITWTTMVTGLTQNGLESEALDVFRRM-RAEGVGIDQ 277

Query: 211 TSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRD 270
            +  ++L A   +  L  G +I     +  + D+V+V + LV  YSKC  V  AE +FR 
Sbjct: 278 YTFGSILTACGALAALEEGKQIHAYITRTCYEDNVFVGSALVDMYSKCRSVRLAEAVFRR 337

Query: 271 IVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLT 330
           ++  ++IS  AMI GY  NG  E ++R+F ++     + +  T+  +I        L   
Sbjct: 338 MMWKNIISWTAMIVGYGQNGCGEEAVRVFSEMQRDGIKPDDFTLGSVISSCANLASLEEG 397

Query: 331 NCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQN 390
              H   L SG+    +V  AL T+Y +   +E A +LFDE S     SW A++ GY Q 
Sbjct: 398 AQFHCLALVSGLRPYVTVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVMGYAQF 457

Query: 391 GLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGK-WVHELVKSRNFESNIYV 449
           G  +E I LF++M +  V P+ VT   +LSAC++ G +  G+ + H + +  +       
Sbjct: 458 GKAKETIDLFEKMLSKGVKPDGVTFIGVLSACSRSGLVDKGRSYFHSMQQDHDIVPLDDH 517

Query: 450 STALIDMYAKCGNIVEARELFDLMSHKSEV-TWNTMISGYGLHG 492
            T +ID+Y++ G + +A E    M    +   W T++S   L G
Sbjct: 518 YTCMIDLYSRSGWLKQAEEFIKQMPRCPDAFGWATLLSACRLRG 561



 Score = 72.8 bits (177), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 65/277 (23%), Positives = 124/277 (44%), Gaps = 20/277 (7%)

Query: 27  QTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNE 86
           Q HA I    +++++   + L    S  ++   A A+F  +   ++  +  +I G+  N 
Sbjct: 298 QIHAYITRTCYEDNVFVGSALVDMYSKCRSVRLAEAVFRRMMWKNIISWTAMIVGYGQNG 357

Query: 87  MPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVG 146
             + ++  ++ ++++  + PD+FT   V+S+ +       G   H  A+VSG    + V 
Sbjct: 358 CGEEAVRVFSEMQRD-GIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLRPYVTVS 416

Query: 147 AALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGT 206
            ALV LY K   ++ A ++FD+M   D V W +++ G  +    +++I +F  M+ + G 
Sbjct: 417 NALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVMGYAQFGKAKETIDLFEKML-SKGV 475

Query: 207 WLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFH----DHVYV-----LTGLVSFYSK 257
             D  +   VL A +    +  G           FH    DH  V      T ++  YS+
Sbjct: 476 KPDGVTFIGVLSACSRSGLVDKGRSY--------FHSMQQDHDIVPLDDHYTCMIDLYSR 527

Query: 258 CGEVERAELLFRDIVR-PDLISCNAMISGYTCNGKTE 293
            G +++AE   + + R PD      ++S     G  E
Sbjct: 528 SGWLKQAEEFIKQMPRCPDAFGWATLLSACRLRGDME 564


>gi|359489486|ref|XP_002269573.2| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33170-like [Vitis vinifera]
          Length = 786

 Score =  463 bits (1192), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 254/726 (34%), Positives = 397/726 (54%), Gaps = 31/726 (4%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           AR LF+  P      ++ +I G+        ++  +  ++      P+ FT+  VL   S
Sbjct: 91  ARKLFYETPIRSCITWSSLISGYCRYGCDVEALELFWEMQYEGE-RPNQFTWGSVLRVCS 149

Query: 120 ACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEK-DTVLWN 178
                  G  +H HAI + + S+ FV   LVD+Y K   +  A  +F+  P+K + VLW 
Sbjct: 150 MYVLLEKGKQIHAHAIKTQFDSNAFVVTGLVDMYAKCKCILEAEYLFELAPDKRNHVLWT 209

Query: 179 SMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLK 238
           +M++G  +N     +I  F DM R  G   +  +  ++L A   +     G ++    ++
Sbjct: 210 AMVTGYSQNGDGHKAIECFRDM-RGEGIECNQFTFPSILTACGSISACGFGAQVHGCIVR 268

Query: 239 LGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRL 298
            GF  +V+V + LV  YSKCG++  A  +   +   D +S N+MI G    G  E +L L
Sbjct: 269 SGFGANVFVGSALVDMYSKCGDLSNARRMLETMEVDDPVSWNSMIVGCVRQGLGEEALSL 328

Query: 299 FRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSR 358
           FR +     +++  T   ++  F     +     +HS  +K+G  +   V  AL  +Y++
Sbjct: 329 FRIMHLRHMKIDEFTYPSVLNCFSFVMDMRNAMSVHSLIVKTGFEAYKLVNNALVDMYAK 388

Query: 359 LNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSI 418
               + A  +F++ ++K + SW +++ G   NG  EEA+ LF EM+   + P+ + ++++
Sbjct: 389 RGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSYEEALRLFCEMRIMGIHPDQIVIAAV 448

Query: 419 LSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSE 478
           LSACA+L  +  GK VH         S++ V  +L+ MYAKCG I +A ++FD M  +  
Sbjct: 449 LSACAELTVLEFGKQVHANFLKSGLGSSLSVDNSLVSMYAKCGCIEDANKVFDSMEIQDV 508

Query: 479 VTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQS 538
           +TW  +I GY  +G G +                            HAGLV  G   FQS
Sbjct: 509 ITWTALIVGYAQNGRGRD----------------------------HAGLVEHGRSYFQS 540

Query: 539 MIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTN 598
           M   +G KP  EHYACM+D+LGR+G+L +A E +  +AV+P   VW ALL AC +H +  
Sbjct: 541 MEEVYGIKPGPEHYACMIDLLGRSGKLMEAKELLNQMAVQPDATVWKALLAACRVHGNVE 600

Query: 599 LARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVG 658
           L   A+  LFEL+P+N   +VLLSN+YSA   + +AA  R+++K R ++K PGC+ IE+ 
Sbjct: 601 LGERAANNLFELEPKNAVPYVLLSNLYSAAGKWEEAAKTRRLMKLRGVSKEPGCSWIEMS 660

Query: 659 GTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSE 718
              H F S D+ HP++  IY+ ++++   ++EAG+  +   ALHD++EE KEL +  HSE
Sbjct: 661 SKVHRFMSEDRSHPRTAEIYSKVDEIMILIKEAGYVPDMNFALHDMDEEGKELGLAYHSE 720

Query: 719 KLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVC 778
           KLA+AFGL+   PG  IRI KNLR+C DCHTA K++S V  R +++RD+N FHHF+ G C
Sbjct: 721 KLAVAFGLLTMPPGAPIRIFKNLRICGDCHTAMKYVSGVFHRHVILRDSNCFHHFREGAC 780

Query: 779 SCGDYW 784
           SC DYW
Sbjct: 781 SCSDYW 786



 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 101/343 (29%), Positives = 169/343 (49%), Gaps = 3/343 (0%)

Query: 251 LVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVN 310
           ++  Y+  G +  A  LF +      I+ +++ISGY   G    +L LF ++    ER N
Sbjct: 78  MIGAYANSGRLNEARKLFYETPIRSCITWSSLISGYCRYGCDVEALELFWEMQYEGERPN 137

Query: 311 SSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFD 370
             T   ++ V   +  L     IH+  +K+   SN+ V+T L  +Y++   +  A  LF+
Sbjct: 138 QFTWGSVLRVCSMYVLLEKGKQIHAHAIKTQFDSNAFVVTGLVDMYAKCKCILEAEYLFE 197

Query: 371 ESSEK-SLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAIS 429
            + +K +   W AM+ GY+QNG   +AI  F++M+   +  N  T  SIL+AC  + A  
Sbjct: 198 LAPDKRNHVLWTAMVTGYSQNGDGHKAIECFRDMRGEGIECNQFTFPSILTACGSISACG 257

Query: 430 LGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYG 489
            G  VH  +    F +N++V +AL+DMY+KCG++  AR + + M     V+WN+MI G  
Sbjct: 258 FGAQVHGCIVRSGFGANVFVGSALVDMYSKCGDLSNARRMLETMEVDDPVSWNSMIVGCV 317

Query: 490 LHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLA 549
             G G EAL LF  M    ++    T+ SVL   S    +R    +  S+I   GF+   
Sbjct: 318 RQGLGEEALSLFRIMHLRHMKIDEFTYPSVLNCFSFVMDMRNAMSV-HSLIVKTGFEAYK 376

Query: 550 EHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACM 592
                +VD+  + G  + A +  + +  +     W +L+  C+
Sbjct: 377 LVNNALVDMYAKRGYFDYAFDVFEKM-TDKDVISWTSLVTGCV 418



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 89/305 (29%), Positives = 137/305 (44%), Gaps = 34/305 (11%)

Query: 320 VFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLAS 379
           V +   H  L + I  F    G V +SS    + +  S+   ++ ARKLFD   ++   S
Sbjct: 15  VCHQLEHTELNHHIRRFVNSCGTVHSSSDSNWVLSNLSKCGRVDDARKLFDVMPDRDECS 74

Query: 380 WNAM-------------------------------IAGYTQNGLTEEAISLFQEMQASKV 408
           WN M                               I+GY + G   EA+ LF EMQ    
Sbjct: 75  WNTMIGAYANSGRLNEARKLFYETPIRSCITWSSLISGYCRYGCDVEALELFWEMQYEGE 134

Query: 409 APNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARE 468
            PN  T  S+L  C+    +  GK +H       F+SN +V T L+DMYAKC  I+EA  
Sbjct: 135 RPNQFTWGSVLRVCSMYVLLEKGKQIHAHAIKTQFDSNAFVVTGLVDMYAKCKCILEAEY 194

Query: 469 LFDLMSHK-SEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAG 527
           LF+L   K + V W  M++GY  +G G +A++ F +M   GI  +  TF S+L AC    
Sbjct: 195 LFELAPDKRNHVLWTAMVTGYSQNGDGHKAIECFRDMRGEGIECNQFTFPSILTACGSIS 254

Query: 528 LVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGAL 587
               G ++   ++   GF       + +VD+  + G L  A   ++ + V+  P  W ++
Sbjct: 255 ACGFGAQVHGCIVRS-GFGANVFVGSALVDMYSKCGDLSNARRMLETMEVDD-PVSWNSM 312

Query: 588 LGACM 592
           +  C+
Sbjct: 313 IVGCV 317


>gi|242062548|ref|XP_002452563.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
 gi|241932394|gb|EES05539.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
          Length = 745

 Score =  463 bits (1191), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 254/699 (36%), Positives = 374/699 (53%), Gaps = 63/699 (9%)

Query: 149 LVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRN----- 203
           L+  Y K      AR+VFD MP  +   +N+++S L       D   +F  M +      
Sbjct: 47  LLTAYGKAGRHARARRVFDAMPHPNLFTYNALLSTLAHARLLSDMEALFASMTQRDIVSY 106

Query: 204 ---------GGTWLDSTSV-AAVLPAVAEVQELR-----------------LGMEIQCLG 236
                    GG+   +  V  A+L A + V+  R                 LG +  C  
Sbjct: 107 NAVIAGFSGGGSHAQAVRVYLALLQADSSVRPSRITMSTMVMAASALGDRALGKQFHCQI 166

Query: 237 LKLGFHDHVYVLTGLVSFYSK-------------------------------CGEVERAE 265
           L+LGF  + +V + LV  Y+K                               C  VE A 
Sbjct: 167 LRLGFGANAFVGSPLVDMYAKMSLVGDAKRAFDEVDSKNVVMYNTMITGLLRCKMVEEAR 226

Query: 266 LLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFG 325
            LF  +   D I+   M++G+T NG    +L +FR++      ++  T   ++       
Sbjct: 227 RLFEVMTDRDSITWTTMVTGFTQNGLESEALEIFRRMRFQGIAIDQYTFGSILTACGALS 286

Query: 326 HLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIA 385
            L     IH++ +++    N  V +AL  +YS+   ++ A  +F   + K++ SW A+I 
Sbjct: 287 ALEQGKQIHAYIIRTRYDDNVFVGSALVDMYSKCRSIKLAETVFRRMTCKNIISWTALIV 346

Query: 386 GYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFES 445
           GY QNG +EEA+ +F EMQ   + P+  T+ S++S+CA L ++  G   H L        
Sbjct: 347 GYGQNGCSEEAVRVFSEMQRDGIDPDDYTLGSVISSCANLASLEEGAQFHCLALVSGLMH 406

Query: 446 NIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEML 505
            I VS AL+ +Y KCG+I +A  LFD MS   +V+W  ++SGY   G   E + LF +ML
Sbjct: 407 YITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVSGYAQFGRAKETIDLFEKML 466

Query: 506 HSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQL 565
             G++P GVTF+ VL ACS AG V +G   F SM  DHG  P+ +HY CM+D+  R+G+L
Sbjct: 467 AKGVKPDGVTFIGVLSACSRAGFVEKGRSYFHSMQKDHGIVPIDDHYTCMIDLYSRSGKL 526

Query: 566 EKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIY 625
           ++A EFIK + + P    WG LL AC +  D  + + A+E L E+DP+N   +VLL +++
Sbjct: 527 KEAEEFIKQMPMHPDAIGWGTLLSACRLRGDMEIGKWAAENLLEIDPQNPASYVLLCSMH 586

Query: 626 SAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLN 685
           +A+  + + A +R+ ++ R++ K PGC+ I+     H+F++ DQ HP S  IY  LE LN
Sbjct: 587 AAKGQWNEVAQLRRGMRDRQVKKEPGCSWIKYKNKVHIFSADDQSHPCSKGIYEKLEWLN 646

Query: 686 GKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCL 745
            KM E G++ +  + LHDV + +K  M+  HSEKLAIAFGLI       IRI+KNLRVC+
Sbjct: 647 SKMLEEGYKPDVSSVLHDVADTDKVHMVSHHSEKLAIAFGLIFVPQEMPIRIVKNLRVCV 706

Query: 746 DCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           DCH ATKFISK+TGR I+VRDA RFH F  GVCSCGD+W
Sbjct: 707 DCHNATKFISKITGRDILVRDAVRFHKFSDGVCSCGDFW 745



 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 145/487 (29%), Positives = 242/487 (49%), Gaps = 39/487 (8%)

Query: 39  NDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHL 98
           N L +    A  LSD +A      LF S+ + D+  +N +I GFS       ++  Y  L
Sbjct: 76  NALLSTLAHARLLSDMEA------LFASMTQRDIVSYNAVIAGFSGGGSHAQAVRVYLAL 129

Query: 99  -RKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFS 157
            + ++++ P   T S ++ AASA  DR++G   H   +  G+G++ FVG+ LVD+Y K S
Sbjct: 130 LQADSSVRPSRITMSTMVMAASALGDRALGKQFHCQILRLGFGANAFVGSPLVDMYAKMS 189

Query: 158 WVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMV-RNGGTW--------- 207
            V  A++ FD++  K+ V++N+MI+GL++    +++  +F  M  R+  TW         
Sbjct: 190 LVGDAKRAFDEVDSKNVVMYNTMITGLLRCKMVEEARRLFEVMTDRDSITWTTMVTGFTQ 249

Query: 208 --------------------LDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYV 247
                               +D  +  ++L A   +  L  G +I    ++  + D+V+V
Sbjct: 250 NGLESEALEIFRRMRFQGIAIDQYTFGSILTACGALSALEQGKQIHAYIIRTRYDDNVFV 309

Query: 248 LTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAE 307
            + LV  YSKC  ++ AE +FR +   ++IS  A+I GY  NG +E ++R+F ++     
Sbjct: 310 GSALVDMYSKCRSIKLAETVFRRMTCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDGI 369

Query: 308 RVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARK 367
             +  T+  +I        L      H   L SG++   +V  AL T+Y +   +E A +
Sbjct: 370 DPDDYTLGSVISSCANLASLEEGAQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHR 429

Query: 368 LFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGA 427
           LFDE S     SW A+++GY Q G  +E I LF++M A  V P+ VT   +LSAC++ G 
Sbjct: 430 LFDEMSFHDQVSWTALVSGYAQFGRAKETIDLFEKMLAKGVKPDGVTFIGVLSACSRAGF 489

Query: 428 ISLGK-WVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMS-HKSEVTWNTMI 485
           +  G+ + H + K           T +ID+Y++ G + EA E    M  H   + W T++
Sbjct: 490 VEKGRSYFHSMQKDHGIVPIDDHYTCMIDLYSRSGKLKEAEEFIKQMPMHPDAIGWGTLL 549

Query: 486 SGYGLHG 492
           S   L G
Sbjct: 550 SACRLRG 556



 Score = 95.9 bits (237), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 68/257 (26%), Positives = 115/257 (44%), Gaps = 64/257 (24%)

Query: 348 VLTALSTVYSRLNEMEAARKLFD-------------------------------ESSEKS 376
           +L  L T Y +      AR++FD                                 +++ 
Sbjct: 43  LLNHLLTAYGKAGRHARARRVFDAMPHPNLFTYNALLSTLAHARLLSDMEALFASMTQRD 102

Query: 377 LASWNAMIAGYTQNGLTEEAISLFQE-MQA-SKVAPNPVTVSSILSACAQLGAISLGKWV 434
           + S+NA+IAG++  G   +A+ ++   +QA S V P+ +T+S+++ A + LG  +LGK  
Sbjct: 103 IVSYNAVIAGFSGGGSHAQAVRVYLALLQADSSVRPSRITMSTMVMAASALGDRALGKQF 162

Query: 435 HELVKSRNFESNIYVSTALIDMYAK-------------------------------CGNI 463
           H  +    F +N +V + L+DMYAK                               C  +
Sbjct: 163 HCQILRLGFGANAFVGSPLVDMYAKMSLVGDAKRAFDEVDSKNVVMYNTMITGLLRCKMV 222

Query: 464 VEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYAC 523
            EAR LF++M+ +  +TW TM++G+  +G   EAL++F  M   GI     TF S+L AC
Sbjct: 223 EEARRLFEVMTDRDSITWTTMVTGFTQNGLESEALEIFRRMRFQGIAIDQYTFGSILTAC 282

Query: 524 SHAGLVREGDEIFQSMI 540
                + +G +I   +I
Sbjct: 283 GALSALEQGKQIHAYII 299


>gi|242032827|ref|XP_002463808.1| hypothetical protein SORBIDRAFT_01g006560 [Sorghum bicolor]
 gi|241917662|gb|EER90806.1| hypothetical protein SORBIDRAFT_01g006560 [Sorghum bicolor]
          Length = 803

 Score =  463 bits (1191), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 259/707 (36%), Positives = 387/707 (54%), Gaps = 67/707 (9%)

Query: 144 FVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRN 203
           F   +L+ +Y K   +  AR VF +MPE+D V W  M+ GL +   F D++  F DMV  
Sbjct: 98  FTWNSLLSMYAKSGRLADARVVFAQMPERDAVSWTVMVVGLNRAGRFWDAVKTFLDMVGE 157

Query: 204 GGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVER 263
           G        +  VL + A  +   +G ++    +KLG    V V   ++  Y KCG+ E 
Sbjct: 158 GLA-PSQFMLTNVLSSCAATEARGIGRKVHSFVIKLGLSSCVPVANSVLYMYGKCGDAET 216

Query: 264 AELLF-RDIVRPD------------------------------LISCNAMISGYTCNGKT 292
           A  +F R  VR +                              ++S NA+I+GY  NG  
Sbjct: 217 ARAVFERMKVRSESSWNAMVSLYTHQGRMDLALSMFENMEERSIVSWNAIIAGYNQNGLD 276

Query: 293 ESSLRLF-RQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTA 351
           + +L+ F R L AS+   +  T+  ++        L +   +HS+ L++G+  +S ++ A
Sbjct: 277 DMALKFFSRMLTASSMEPDEFTVTSVLSACANLRMLKMGKQMHSYILRTGMPYSSQIMNA 336

Query: 352 LSTVYSR---------------------------------LNEMEAARKLFDESSEKSLA 378
           L + Y++                                 L + + AR++FD  + + + 
Sbjct: 337 LISTYAKSGSVETARRIMDKAVVADLNVISFTALLEGYVKLGDTKQAREVFDVMNNRDVI 396

Query: 379 SWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELV 438
           +W AMI GY QNG  +EA+ LF+ M  S   PN  T++++LSACA L  +  GK +H   
Sbjct: 397 AWTAMIVGYEQNGQNDEAMELFRSMIRSGPEPNSHTLAAVLSACASLAYLGYGKQIHCRA 456

Query: 439 KSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSE-VTWNTMISGYGLHGHGLEA 497
                E ++ VS A+I +YA+ G++  AR +FD +  + E VTW +MI     HG G +A
Sbjct: 457 IRSLQEQSVSVSNAIITVYARSGSVPLARRVFDQICWRKETVTWTSMIVALAQHGLGEQA 516

Query: 498 LQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVD 557
           + LF EML  G++P  VT++ V  AC+HAG + +G   ++ M+++HG  P   HYACMVD
Sbjct: 517 IVLFEEMLRVGVKPDRVTYIGVFSACTHAGFIDKGKRYYEQMLNEHGIVPEMSHYACMVD 576

Query: 558 ILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGY 617
           +L RAG L +A EFI+ + V P   VWG+LL AC + K+ +LA +A+EKL  +DP+N G 
Sbjct: 577 LLARAGLLTEAHEFIQRMPVAPDTVVWGSLLAACRVRKNADLAELAAEKLLSIDPDNSGA 636

Query: 618 HVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAI 677
           +  L+N+YSA   +  AA + ++ K + + K  G +   V    HVF + D LHPQ  AI
Sbjct: 637 YSALANVYSACGRWNDAARIWKLRKDKAVKKETGFSWTHVQSKVHVFGADDVLHPQRDAI 696

Query: 678 YAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRI 737
                ++  ++++AGF  +  + LHDV++E KE ++  HSEKLAIAFGLI+T   T +RI
Sbjct: 697 CKKAAEMWEEIKKAGFVPDLNSVLHDVDDELKEELLSRHSEKLAIAFGLISTPEKTTLRI 756

Query: 738 IKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           +KNLRVC DCHTA KFISKV  R I+VRDA RFHHF+ G CSC DYW
Sbjct: 757 MKNLRVCNDCHTAIKFISKVVDREIIVRDATRFHHFRDGYCSCKDYW 803



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 129/516 (25%), Positives = 220/516 (42%), Gaps = 74/516 (14%)

Query: 39  NDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHL 98
           N L ++   + RL+D      AR +F  +P+ D   + V++ G +       ++  +  +
Sbjct: 101 NSLLSMYAKSGRLAD------ARVVFAQMPERDAVSWTVMVVGLNRAGRFWDAVKTFLDM 154

Query: 99  RKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSW 158
                L P  F  + VLS+ +A   R IG  +H   I  G  S + V  +++ +Y K   
Sbjct: 155 -VGEGLAPSQFMLTNVLSSCAATEARGIGRKVHSFVIKLGLSSCVPVANSVLYMYGKCGD 213

Query: 159 VKSARKVFDKMP-------------------------------EKDTVLWNSMISGLMKN 187
            ++AR VF++M                                E+  V WN++I+G  +N
Sbjct: 214 AETARAVFERMKVRSESSWNAMVSLYTHQGRMDLALSMFENMEERSIVSWNAIIAGYNQN 273

Query: 188 CCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYV 247
                ++  F  M+       D  +V +VL A A ++ L++G ++    L+ G      +
Sbjct: 274 GLDDMALKFFSRMLTASSMEPDEFTVTSVLSACANLRMLKMGKQMHSYILRTGMPYSSQI 333

Query: 248 LTGLVSFYSKCGEVERAELLFRDIVRPDL------------------------------- 276
           +  L+S Y+K G VE A  +    V  DL                               
Sbjct: 334 MNALISTYAKSGSVETARRIMDKAVVADLNVISFTALLEGYVKLGDTKQAREVFDVMNNR 393

Query: 277 --ISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIH 334
             I+  AMI GY  NG+ + ++ LFR ++ S    NS T+  ++       +L     IH
Sbjct: 394 DVIAWTAMIVGYEQNGQNDEAMELFRSMIRSGPEPNSHTLAAVLSACASLAYLGYGKQIH 453

Query: 335 SFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDE-SSEKSLASWNAMIAGYTQNGLT 393
              ++S    + SV  A+ TVY+R   +  AR++FD+    K   +W +MI    Q+GL 
Sbjct: 454 CRAIRSLQEQSVSVSNAIITVYARSGSVPLARRVFDQICWRKETVTWTSMIVALAQHGLG 513

Query: 394 EEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHE-LVKSRNFESNIYVSTA 452
           E+AI LF+EM    V P+ VT   + SAC   G I  GK  +E ++        +     
Sbjct: 514 EQAIVLFEEMLRVGVKPDRVTYIGVFSACTHAGFIDKGKRYYEQMLNEHGIVPEMSHYAC 573

Query: 453 LIDMYAKCGNIVEARELFDLMSHKSE-VTWNTMISG 487
           ++D+ A+ G + EA E    M    + V W ++++ 
Sbjct: 574 MVDLLARAGLLTEAHEFIQRMPVAPDTVVWGSLLAA 609



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 114/456 (25%), Positives = 193/456 (42%), Gaps = 98/456 (21%)

Query: 244 HVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLL 303
           + +    L+S Y+K G +  A ++F  +   D +S   M+ G    G+   +++ F  ++
Sbjct: 96  NAFTWNSLLSMYAKSGRLADARVVFAQMPERDAVSWTVMVVGLNRAGRFWDAVKTFLDMV 155

Query: 304 ASAERVNSSTIVGLIPVFYPFGHLHLTNC-----------IHSFCLKSGIVSNSSVLTAL 352
                       GL P  +   ++ L++C           +HSF +K G+ S   V  ++
Sbjct: 156 GE----------GLAPSQFMLTNV-LSSCAATEARGIGRKVHSFVIKLGLSSCVPVANSV 204

Query: 353 STVYSRLNEMEAARKLFDESSEKSLASWNAM----------------------------- 383
             +Y +  + E AR +F+    +S +SWNAM                             
Sbjct: 205 LYMYGKCGDAETARAVFERMKVRSESSWNAMVSLYTHQGRMDLALSMFENMEERSIVSWN 264

Query: 384 --IAGYTQNGLTEEAISLFQEM-QASKVAPNPVTVSSILSACAQLGAISLGKWVHELV-- 438
             IAGY QNGL + A+  F  M  AS + P+  TV+S+LSACA L  + +GK +H  +  
Sbjct: 265 AIIAGYNQNGLDDMALKFFSRMLTASSMEPDEFTVTSVLSACANLRMLKMGKQMHSYILR 324

Query: 439 ------------------KSRNFES-------------NIYVSTALIDMYAKCGNIVEAR 467
                             KS + E+             N+   TAL++ Y K G+  +AR
Sbjct: 325 TGMPYSSQIMNALISTYAKSGSVETARRIMDKAVVADLNVISFTALLEGYVKLGDTKQAR 384

Query: 468 ELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAG 527
           E+FD+M+++  + W  MI GY  +G   EA++LF  M+ SG  P+  T  +VL AC+   
Sbjct: 385 EVFDVMNNRDVIAWTAMIVGYEQNGQNDEAMELFRSMIRSGPEPNSHTLAAVLSACASLA 444

Query: 528 LVREGDEIFQSMIHDHGFKPLAEHYA----CMVDILGRAGQLEKALEFIKGLAVEPGPAV 583
            +  G +     IH    + L E        ++ +  R+G +  A      +        
Sbjct: 445 YLGYGKQ-----IHCRAIRSLQEQSVSVSNAIITVYARSGSVPLARRVFDQICWRKETVT 499

Query: 584 WGALLGACMIHKDTNLARVASEKLFE--LDPENVGY 617
           W +++ A   H     A V  E++    + P+ V Y
Sbjct: 500 WTSMIVALAQHGLGEQAIVLFEEMLRVGVKPDRVTY 535



 Score =  110 bits (276), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 106/452 (23%), Positives = 195/452 (43%), Gaps = 69/452 (15%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           A ++F ++ +  +  +N II G++ N +   ++ F++ +   +++ PD FT + VLSA +
Sbjct: 248 ALSMFENMEERSIVSWNAIIAGYNQNGLDDMALKFFSRMLTASSMEPDEFTVTSVLSACA 307

Query: 120 ACCDRSIGVLLHGH--------------AIVSGYG-----------------SDLFVGA- 147
                 +G  +H +              A++S Y                  +DL V + 
Sbjct: 308 NLRMLKMGKQMHSYILRTGMPYSSQIMNALISTYAKSGSVETARRIMDKAVVADLNVISF 367

Query: 148 -ALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGT 206
            AL++ Y K    K AR+VFD M  +D + W +MI G  +N    +++ +F  M+R+G  
Sbjct: 368 TALLEGYVKLGDTKQAREVFDVMNNRDVIAWTAMIVGYEQNGQNDEAMELFRSMIRSGPE 427

Query: 207 WLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAEL 266
             +S ++AAVL A A +  L  G +I C  ++      V V   +++ Y++ G V  A  
Sbjct: 428 -PNSHTLAAVLSACASLAYLGYGKQIHCRAIRSLQEQSVSVSNAIITVYARSGSVPLARR 486

Query: 267 LFRDIV-RPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFG 325
           +F  I  R + ++  +MI     +G  E ++ LF ++L    + +  T +G+        
Sbjct: 487 VFDQICWRKETVTWTSMIVALAQHGLGEQAIVLFEEMLRVGVKPDRVTYIGV-------- 538

Query: 326 HLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIA 385
               + C H+  +  G      +L     V                     ++ +  M+ 
Sbjct: 539 ---FSACTHAGFIDKGKRYYEQMLNEHGIV-------------------PEMSHYACMVD 576

Query: 386 GYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFES 445
              + GL  EA    Q M    VAP+ V   S+L+AC       L +   E + S +   
Sbjct: 577 LLARAGLLTEAHEFIQRM---PVAPDTVVWGSLLAACRVRKNADLAELAAEKLLSID-PD 632

Query: 446 NIYVSTALIDMYAKCGNIVEARELFDLMSHKS 477
           N    +AL ++Y+ CG   +A  ++ L   K+
Sbjct: 633 NSGAYSALANVYSACGRWNDAARIWKLRKDKA 664


>gi|224115100|ref|XP_002332237.1| predicted protein [Populus trichocarpa]
 gi|222831850|gb|EEE70327.1| predicted protein [Populus trichocarpa]
          Length = 444

 Score =  463 bits (1191), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 216/436 (49%), Positives = 297/436 (68%)

Query: 349 LTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKV 408
           LTA+ T Y++   ++ AR LFD   E+    WN MI GY Q+GL  E + LF++M  +KV
Sbjct: 9   LTAMITCYAKYGMIDEARVLFDGLEERDAICWNVMIDGYAQHGLPNEGLLLFRQMLNAKV 68

Query: 409 APNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARE 468
            PN VTV ++LSAC Q GA+  G+WVH  +++     N+ V T+LIDMY+KCG++ +AR 
Sbjct: 69  RPNEVTVLAVLSACGQTGALETGRWVHSYIENNGIGINVRVGTSLIDMYSKCGSLEDARL 128

Query: 469 LFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGL 528
           +F+ +S+K  V WN+M+ GY +HG   +AL+LF EM   G +P+ +TF+ VL ACSHAGL
Sbjct: 129 VFERISNKDVVAWNSMVVGYAMHGFSQDALRLFKEMCMIGYQPTDITFIGVLNACSHAGL 188

Query: 529 VREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALL 588
           V EG + F SM  ++G +P  EHY CMV++LGRAG LE+A E +K + ++  P +WG LL
Sbjct: 189 VSEGWKFFYSMKDEYGIEPKVEHYGCMVNLLGRAGYLEEAYELVKNMEIDQDPVLWGTLL 248

Query: 589 GACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAK 648
           GAC +H +  L    +E L   +  N G +VLLSNIY+A  ++   A VR ++K+    K
Sbjct: 249 GACRLHGNIALGEQIAEYLVSQNLANSGTYVLLSNIYAAAGNWEGVARVRTLMKESGFEK 308

Query: 649 APGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEE 708
            PGC+ IEV    H F +GD  HP+S  IY MLE++NG ++  G+  +T   LHD+E+ +
Sbjct: 309 EPGCSSIEVNNKVHEFLAGDLRHPKSREIYEMLEEINGWLKTHGYTPQTDIVLHDLEDAQ 368

Query: 709 KELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDAN 768
           KE  + VHSEKLA+AFGLI T+PGT I+I+KNLRVC DCH  TK ISK+TGR +V+RD N
Sbjct: 369 KERSLGVHSEKLALAFGLITTKPGTTIKIVKNLRVCADCHAVTKLISKITGRKVVMRDRN 428

Query: 769 RFHHFKGGVCSCGDYW 784
           RFHHF  G+CSCGDYW
Sbjct: 429 RFHHFVNGLCSCGDYW 444



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 88/302 (29%), Positives = 152/302 (50%), Gaps = 6/302 (1%)

Query: 248 LTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAE 307
           LT +++ Y+K G ++ A +LF  +   D I  N MI GY  +G     L LFRQ+L +  
Sbjct: 9   LTAMITCYAKYGMIDEARVLFDGLEERDAICWNVMIDGYAQHGLPNEGLLLFRQMLNAKV 68

Query: 308 RVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARK 367
           R N  T++ ++      G L     +HS+   +GI  N  V T+L  +YS+   +E AR 
Sbjct: 69  RPNEVTVLAVLSACGQTGALETGRWVHSYIENNGIGINVRVGTSLIDMYSKCGSLEDARL 128

Query: 368 LFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGA 427
           +F+  S K + +WN+M+ GY  +G +++A+ LF+EM      P  +T   +L+AC+  G 
Sbjct: 129 VFERISNKDVVAWNSMVVGYAMHGFSQDALRLFKEMCMIGYQPTDITFIGVLNACSHAGL 188

Query: 428 ISLG-KWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMS-HKSEVTWNTMI 485
           +S G K+ + +      E  +     ++++  + G + EA EL   M   +  V W T++
Sbjct: 189 VSEGWKFFYSMKDEYGIEPKVEHYGCMVNLLGRAGYLEEAYELVKNMEIDQDPVLWGTLL 248

Query: 486 SGYGLHGHGLEALQLFSEMLHSGIRPSGV-TFLSVLYACSHAGLVREGDEIFQSMIHDHG 544
               LHG+     Q+   ++   +  SG    LS +YA   A    EG    ++++ + G
Sbjct: 249 GACRLHGNIALGEQIAEYLVSQNLANSGTYVLLSNIYA---AAGNWEGVARVRTLMKESG 305

Query: 545 FK 546
           F+
Sbjct: 306 FE 307



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 86/316 (27%), Positives = 145/316 (45%), Gaps = 37/316 (11%)

Query: 148 ALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTW 207
           A++  Y K+  +  AR +FD + E+D + WN MI G  ++    + + +F  M+ N    
Sbjct: 11  AMITCYAKYGMIDEARVLFDGLEERDAICWNVMIDGYAQHGLPNEGLLLFRQML-NAKVR 69

Query: 208 LDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELL 267
            +  +V AVL A  +   L  G  +       G   +V V T L+  YSKCG +E A L+
Sbjct: 70  PNEVTVLAVLSACGQTGALETGRWVHSYIENNGIGINVRVGTSLIDMYSKCGSLEDARLV 129

Query: 268 FRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHL 327
           F  I   D+++ N+M+ GY  +G ++ +LRLF+++     +    T +G++         
Sbjct: 130 FERISNKDVVAWNSMVVGYAMHGFSQDALRLFKEMCMIGYQPTDITFIGVL--------- 180

Query: 328 HLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGY 387
                  + C  +G+VS           YS  +E            E  +  +  M+   
Sbjct: 181 -------NACSHAGLVSE-----GWKFFYSMKDEY---------GIEPKVEHYGCMVNLL 219

Query: 388 TQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNF-ESN 446
            + G  EEA  L + M+   +  +PV   ++L AC   G I+LG+ + E + S+N   S 
Sbjct: 220 GRAGYLEEAYELVKNME---IDQDPVLWGTLLGACRLHGNIALGEQIAEYLVSQNLANSG 276

Query: 447 IYVSTALIDMYAKCGN 462
            YV   L ++YA  GN
Sbjct: 277 TYV--LLSNIYAAAGN 290



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 48/125 (38%), Positives = 68/125 (54%), Gaps = 1/125 (0%)

Query: 444 ESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSE 503
           E ++   TA+I  YAK G I EAR LFD +  +  + WN MI GY  HG   E L LF +
Sbjct: 3   EKSLVSLTAMITCYAKYGMIDEARVLFDGLEERDAICWNVMIDGYAQHGLPNEGLLLFRQ 62

Query: 504 MLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAG 563
           ML++ +RP+ VT L+VL AC   G +  G  +  S I ++G          ++D+  + G
Sbjct: 63  MLNAKVRPNEVTVLAVLSACGQTGALETGRWV-HSYIENNGIGINVRVGTSLIDMYSKCG 121

Query: 564 QLEKA 568
            LE A
Sbjct: 122 SLEDA 126



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 72/295 (24%), Positives = 131/295 (44%), Gaps = 13/295 (4%)

Query: 57  TCYA--------RALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDN 108
           TCYA        R LF  + + D   +NV+I G++ + +P   +  +  +  N  + P+ 
Sbjct: 14  TCYAKYGMIDEARVLFDGLEERDAICWNVMIDGYAQHGLPNEGLLLFRQML-NAKVRPNE 72

Query: 109 FTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDK 168
            T   VLSA         G  +H +   +G G ++ VG +L+D+Y K   ++ AR VF++
Sbjct: 73  VTVLAVLSACGQTGALETGRWVHSYIENNGIGINVRVGTSLIDMYSKCGSLEDARLVFER 132

Query: 169 MPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRL 228
           +  KD V WNSM+ G   +   QD++ +F +M   G    D T +  VL A +    +  
Sbjct: 133 ISNKDVVAWNSMVVGYAMHGFSQDALRLFKEMCMIGYQPTDITFI-GVLNACSHAGLVSE 191

Query: 229 GME-IQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDI-VRPDLISCNAMISGY 286
           G +    +  + G    V     +V+   + G +E A  L +++ +  D +    ++   
Sbjct: 192 GWKFFYSMKDEYGIEPKVEHYGCMVNLLGRAGYLEEAYELVKNMEIDQDPVLWGTLLGAC 251

Query: 287 TCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSG 341
             +G      ++  + L S    NS T V L  ++   G+      + +   +SG
Sbjct: 252 RLHGNIALGEQI-AEYLVSQNLANSGTYVLLSNIYAAAGNWEGVARVRTLMKESG 305


>gi|115443695|ref|NP_001045627.1| Os02g0106300 [Oryza sativa Japonica Group]
 gi|50252103|dbj|BAD28089.1| putative pentatricopeptide (PPR) repeat-containing protein-like
           protein [Oryza sativa Japonica Group]
 gi|113535158|dbj|BAF07541.1| Os02g0106300 [Oryza sativa Japonica Group]
 gi|215766741|dbj|BAG98969.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 751

 Score =  463 bits (1191), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 242/674 (35%), Positives = 373/674 (55%), Gaps = 31/674 (4%)

Query: 142 DLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMV 201
           +LF   AL+        V    ++F  MPE+D V +N++I+G         S+ ++  ++
Sbjct: 78  NLFTRNALLSALAHSRLVPDMERLFASMPERDAVSYNALITGFSSTGSPARSVQLYRALL 137

Query: 202 RNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSK---- 257
           R         +++A++   + + +  LG  + C  L+LGF  + +V + LV  Y+K    
Sbjct: 138 REESVRPTRITLSAMIMVASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLI 197

Query: 258 ---------------------------CGEVERAELLFRDIVRPDLISCNAMISGYTCNG 290
                                      C  +E A+ LF+ +V  D I+   M++G T NG
Sbjct: 198 RDARRVFQEMEAKTVVMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNG 257

Query: 291 KTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLT 350
               +L +FR++ A    ++  T   ++        L     IH++  ++    N  V +
Sbjct: 258 LQLEALDVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTWYEDNVFVGS 317

Query: 351 ALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAP 410
           AL  +YS+   +  A  +F   + +++ SW AMI GY QN  +EEA+  F EMQ   + P
Sbjct: 318 ALVDMYSKCRSIRLAEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKP 377

Query: 411 NPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELF 470
           +  T+ S++S+CA L ++  G   H L         I VS AL+ +Y KCG+I +A  LF
Sbjct: 378 DDFTLGSVISSCANLASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLF 437

Query: 471 DLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVR 530
           D MS   +V+W  +++GY   G   E + LF +ML +G++P GVTF+ VL ACS AGLV 
Sbjct: 438 DEMSFHDQVSWTALVTGYAQFGKAKETIDLFEKMLANGLKPDGVTFIGVLSACSRAGLVE 497

Query: 531 EGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGA 590
           +G + F SM  DHG  P+ +HY CM+D+  R+G+ ++A EFIK +   P    W  LL +
Sbjct: 498 KGCDYFDSMQKDHGIVPIDDHYTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSS 557

Query: 591 CMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAP 650
           C +  +  + + A+E L E DP+N   +VLL ++++A+  + + A +R+ ++ R++ K P
Sbjct: 558 CRLRGNMEIGKWAAENLLETDPQNPASYVLLCSMHAAKGQWTEVAHLRRGMRDRQVKKEP 617

Query: 651 GCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKE 710
           GC+ I+     H+F++ DQ HP S+ IY  LE LN KM E G++ +  + LHDV + +K 
Sbjct: 618 GCSWIKYKNKVHIFSADDQSHPFSSRIYEKLEWLNSKMAEEGYKPDVSSVLHDVADADKV 677

Query: 711 LMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRF 770
            M+  HSEKLAIAFGLI       IRI+KNLRVC+DCH ATKFISK+TGR I+VRDA RF
Sbjct: 678 HMISHHSEKLAIAFGLIFVPQEMPIRIVKNLRVCVDCHNATKFISKITGRDILVRDAVRF 737

Query: 771 HHFKGGVCSCGDYW 784
           H F  G CSCGD+W
Sbjct: 738 HKFSDGTCSCGDFW 751



 Score =  222 bits (565), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 139/463 (30%), Positives = 227/463 (49%), Gaps = 32/463 (6%)

Query: 63  LFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACC 122
           LF S+P+ D   +N +I GFS+   P  S+  Y  L +  ++ P   T S ++  ASA  
Sbjct: 101 LFASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREESVRPTRITLSAMIMVASALS 160

Query: 123 DRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMIS 182
           DR++G  +H   +  G+G+  FVG+ LVD+Y K   ++ AR+VF +M  K  V++N++I+
Sbjct: 161 DRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTLIT 220

Query: 183 GLMKNCCFQDSIWVFGDMV-RNGGTW-----------------------------LDSTS 212
           GL++    +D+  +F  MV R+  TW                             +D  +
Sbjct: 221 GLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYT 280

Query: 213 VAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIV 272
             ++L A   +  L  G +I     +  + D+V+V + LV  YSKC  +  AE +FR + 
Sbjct: 281 FGSILTACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMT 340

Query: 273 RPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNC 332
             ++IS  AMI GY  N  +E ++R F ++     + +  T+  +I        L     
Sbjct: 341 CRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQ 400

Query: 333 IHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGL 392
            H   L SG++   +V  AL T+Y +   +E A +LFDE S     SW A++ GY Q G 
Sbjct: 401 FHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGK 460

Query: 393 TEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLG-KWVHELVKSRNFESNIYVST 451
            +E I LF++M A+ + P+ VT   +LSAC++ G +  G  +   + K           T
Sbjct: 461 AKETIDLFEKMLANGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKDHGIVPIDDHYT 520

Query: 452 ALIDMYAKCGNIVEARELFDLMSHKSEV-TWNTMISGYGLHGH 493
            +ID+Y++ G   EA E    M H  +   W T++S   L G+
Sbjct: 521 CMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSSCRLRGN 563



 Score =  155 bits (393), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 108/407 (26%), Positives = 185/407 (45%), Gaps = 65/407 (15%)

Query: 226 LRLGMEIQCLGLKLGFH-DHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISC----- 279
           +R+   + CL LK        ++L  L++ Y+K G + RA  +F ++  P+L +      
Sbjct: 28  VRVAGAVHCLILKTFLQAPPTFLLNHLLTAYAKSGRLARARRVFDEMPDPNLFTRNALLS 87

Query: 280 --------------------------NAMISGYTCNGKTESSLRLFRQLLASAE-RVNSS 312
                                     NA+I+G++  G    S++L+R LL     R    
Sbjct: 88  ALAHSRLVPDMERLFASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREESVRPTRI 147

Query: 313 TIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDES 372
           T+  +I V        L + +H   L+ G  + + V + L  +Y+++  +  AR++F E 
Sbjct: 148 TLSAMIMVASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEM 207

Query: 373 SEKSLA-------------------------------SWNAMIAGYTQNGLTEEAISLFQ 401
             K++                                +W  M+ G TQNGL  EA+ +F+
Sbjct: 208 EAKTVVMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFR 267

Query: 402 EMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCG 461
            M+A  V  +  T  SIL+AC  L A+  GK +H  +    +E N++V +AL+DMY+KC 
Sbjct: 268 RMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCR 327

Query: 462 NIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLY 521
           +I  A  +F  M+ ++ ++W  MI GYG +    EA++ FSEM   GI+P   T  SV+ 
Sbjct: 328 SIRLAEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVIS 387

Query: 522 ACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKA 568
           +C++   + EG + F  +    G          +V + G+ G +E A
Sbjct: 388 SCANLASLEEGAQ-FHCLALVSGLMRYITVSNALVTLYGKCGSIEDA 433



 Score = 72.8 bits (177), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 66/274 (24%), Positives = 122/274 (44%), Gaps = 14/274 (5%)

Query: 27  QTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNE 86
           Q HA I    +++++   + L    S  ++   A A+F  +   ++  +  +I G+  N 
Sbjct: 299 QIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTCRNIISWTAMIVGYGQNA 358

Query: 87  MPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVG 146
             + ++  ++ ++ +  + PD+FT   V+S+ +       G   H  A+VSG    + V 
Sbjct: 359 CSEEAVRAFSEMQMD-GIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMRYITVS 417

Query: 147 AALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGT 206
            ALV LY K   ++ A ++FD+M   D V W ++++G  +    +++I +F  M+ N G 
Sbjct: 418 NALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGKAKETIDLFEKMLAN-GL 476

Query: 207 WLDSTSVAAVLPAVAEVQELRLGM-EIQCLGLKLGFHDHVYV-----LTGLVSFYSKCGE 260
             D  +   VL A +     R G+ E  C        DH  V      T ++  YS+ G 
Sbjct: 477 KPDGVTFIGVLSACS-----RAGLVEKGCDYFDSMQKDHGIVPIDDHYTCMIDLYSRSGR 531

Query: 261 VERAELLFRDIVR-PDLISCNAMISGYTCNGKTE 293
            + AE   + +   PD      ++S     G  E
Sbjct: 532 FKEAEEFIKQMPHSPDAFGWATLLSSCRLRGNME 565


>gi|42566761|ref|NP_193101.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|223635639|sp|Q9SVP7.2|PP307_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g13650
 gi|332657909|gb|AEE83309.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 1064

 Score =  462 bits (1190), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 265/789 (33%), Positives = 424/789 (53%), Gaps = 16/789 (2%)

Query: 3    MKTPQSRNLFLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARA 62
            M TP + +  LS  K  ++     Q H  ++  GF +D      L            A  
Sbjct: 285  MPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEH 344

Query: 63   LFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACC 122
            +F ++ + D   +N +I G S     + ++  +  +  +  L PD+ T + ++ A SA  
Sbjct: 345  IFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLD-GLEPDSNTLASLVVACSADG 403

Query: 123  DRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMI- 181
                G  LH +    G+ S+  +  AL++LY K + +++A   F +   ++ VLWN M+ 
Sbjct: 404  TLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLV 463

Query: 182  -SGLMKNCCFQDSIWVFGDM-----VRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCL 235
              GL+ +   ++S  +F  M     V N  T+       ++L     + +L LG +I   
Sbjct: 464  AYGLLDD--LRNSFRIFRQMQIEEIVPNQYTY------PSILKTCIRLGDLELGEQIHSQ 515

Query: 236  GLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESS 295
             +K  F  + YV + L+  Y+K G+++ A  +       D++S   MI+GYT     + +
Sbjct: 516  IIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKA 575

Query: 296  LRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTV 355
            L  FRQ+L    R +   +   +        L     IH+    SG  S+     AL T+
Sbjct: 576  LTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTL 635

Query: 356  YSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTV 415
            YSR  ++E +   F+++      +WNA+++G+ Q+G  EEA+ +F  M    +  N  T 
Sbjct: 636  YSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTF 695

Query: 416  SSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSH 475
             S + A ++   +  GK VH ++    ++S   V  ALI MYAKCG+I +A + F  +S 
Sbjct: 696  GSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVST 755

Query: 476  KSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEI 535
            K+EV+WN +I+ Y  HG G EAL  F +M+HS +RP+ VT + VL ACSH GLV +G   
Sbjct: 756  KNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAY 815

Query: 536  FQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHK 595
            F+SM  ++G  P  EHY C+VD+L RAG L +A EFI+ + ++P   VW  LL AC++HK
Sbjct: 816  FESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHK 875

Query: 596  DTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLI 655
            +  +   A+  L EL+PE+   +VLLSN+Y+  + +      RQ +K++ + K PG + I
Sbjct: 876  NMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWI 935

Query: 656  EVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKV 715
            EV  + H F  GDQ HP +  I+   + L  +  E G+  +  + L++++ E+K+ ++ +
Sbjct: 936  EVKNSIHSFYVGDQNHPLADEIHEYFQDLTKRASEIGYVQDCFSLLNELQHEQKDPIIFI 995

Query: 716  HSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKG 775
            HSEKLAI+FGL++      I ++KNLRVC DCH   KF+SKV+ R I+VRDA RFHHF+G
Sbjct: 996  HSEKLAISFGLLSLPATVPINVMKNLRVCNDCHAWIKFVSKVSNREIIVRDAYRFHHFEG 1055

Query: 776  GVCSCGDYW 784
            G CSC DYW
Sbjct: 1056 GACSCKDYW 1064



 Score =  220 bits (560), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 153/571 (26%), Positives = 272/571 (47%), Gaps = 6/571 (1%)

Query: 25  LTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSN 84
           + Q HA+I+  G ++       L    S       AR +F  +   D   +  +I G S 
Sbjct: 206 VEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSK 265

Query: 85  NEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLF 144
           NE    +I  +  +     + P  + +S VLSA        IG  LHG  +  G+ SD +
Sbjct: 266 NECEAEAIRLFCDMYV-LGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTY 324

Query: 145 VGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNG 204
           V  ALV LYF    + SA  +F  M ++D V +N++I+GL +    + ++ +F  M  + 
Sbjct: 325 VCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLD- 383

Query: 205 GTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERA 264
           G   DS ++A+++ A +    L  G ++     KLGF  +  +   L++ Y+KC ++E A
Sbjct: 384 GLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETA 443

Query: 265 ELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPF 324
              F +    +++  N M+  Y       +S R+FRQ+       N  T   ++      
Sbjct: 444 LDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRL 503

Query: 325 GHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMI 384
           G L L   IHS  +K+    N+ V + L  +Y++L +++ A  +    + K + SW  MI
Sbjct: 504 GDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMI 563

Query: 385 AGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFE 444
           AGYTQ    ++A++ F++M    +  + V +++ +SACA L A+  G+ +H       F 
Sbjct: 564 AGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFS 623

Query: 445 SNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEM 504
           S++    AL+ +Y++CG I E+   F+       + WN ++SG+   G+  EAL++F  M
Sbjct: 624 SDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRM 683

Query: 505 LHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQ 564
              GI  +  TF S + A S    +++G ++  ++I   G+    E    ++ +  + G 
Sbjct: 684 NREGIDNNNFTFGSAVKAASETANMKQGKQV-HAVITKTGYDSETEVCNALISMYAKCGS 742

Query: 565 LEKALEFIKGLAVEPGPAV-WGALLGACMIH 594
           +  A +  + L V     V W A++ A   H
Sbjct: 743 ISDAEK--QFLEVSTKNEVSWNAIINAYSKH 771



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 128/488 (26%), Positives = 220/488 (45%), Gaps = 30/488 (6%)

Query: 100 KNTALTPDNFTYSFVLSAASACCDRSIGVL-----LHGHAIVSGYGSDLFVGAALVDLYF 154
           +N  + P++ T  ++L      C ++ G L     LH   +  G  S+  +   L D Y 
Sbjct: 76  ENRGIRPNHQTLKWLLEG----CLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYL 131

Query: 155 KFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVA 214
               +  A KVFD+MPE+    WN MI  L       +   +F  MV    T  + T   
Sbjct: 132 FKGDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSG 191

Query: 215 AVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRP 274
            +           +  +I    L  G  D   V   L+  YS+ G V+ A  +F  +   
Sbjct: 192 VLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLK 251

Query: 275 DLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFG--------- 325
           D  S  AMISG + N     ++RLF  +           ++G++P  Y F          
Sbjct: 252 DHSSWVAMISGLSKNECEAEAIRLFCDMY----------VLGIMPTPYAFSSVLSACKKI 301

Query: 326 -HLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMI 384
             L +   +H   LK G  S++ V  AL ++Y  L  + +A  +F   S++   ++N +I
Sbjct: 302 ESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLI 361

Query: 385 AGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFE 444
            G +Q G  E+A+ LF+ M    + P+  T++S++ AC+  G +  G+ +H       F 
Sbjct: 362 NGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFA 421

Query: 445 SNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEM 504
           SN  +  AL+++YAKC +I  A + F     ++ V WN M+  YGL      + ++F +M
Sbjct: 422 SNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQM 481

Query: 505 LHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQ 564
               I P+  T+ S+L  C   G +  G++I   +I  + F+  A   + ++D+  + G+
Sbjct: 482 QIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTN-FQLNAYVCSVLIDMYAKLGK 540

Query: 565 LEKALEFI 572
           L+ A + +
Sbjct: 541 LDTAWDIL 548



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 115/427 (26%), Positives = 200/427 (46%), Gaps = 6/427 (1%)

Query: 199 DMVRNGGTWLDSTSVAAVLPAVAEVQ-ELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSK 257
           D V N G   +  ++  +L    +    L  G ++    LKLG   +  +   L  FY  
Sbjct: 73  DSVENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLF 132

Query: 258 CGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGL 317
            G++  A  +F ++    + + N MI              LF ++++     N  T  G+
Sbjct: 133 KGDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGV 192

Query: 318 IPVFYPFG-HLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKS 376
           +           +   IH+  L  G+  ++ V   L  +YSR   ++ AR++FD    K 
Sbjct: 193 LEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKD 252

Query: 377 LASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHE 436
            +SW AMI+G ++N    EAI LF +M    + P P   SS+LSAC ++ ++ +G+ +H 
Sbjct: 253 HSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHG 312

Query: 437 LVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLE 496
           LV    F S+ YV  AL+ +Y   GN++ A  +F  MS +  VT+NT+I+G    G+G +
Sbjct: 313 LVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEK 372

Query: 497 ALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMV 556
           A++LF  M   G+ P   T  S++ ACS  G +  G ++  +     GF    +    ++
Sbjct: 373 AMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQL-HAYTTKLGFASNNKIEGALL 431

Query: 557 DILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKD-TNLARVASE-KLFELDPEN 614
           ++  +   +E AL++     VE    +W  +L A  +  D  N  R+  + ++ E+ P  
Sbjct: 432 NLYAKCADIETALDYFLETEVE-NVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQ 490

Query: 615 VGYHVLL 621
             Y  +L
Sbjct: 491 YTYPSIL 497


>gi|357506719|ref|XP_003623648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355498663|gb|AES79866.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 707

 Score =  462 bits (1190), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 263/730 (36%), Positives = 409/730 (56%), Gaps = 65/730 (8%)

Query: 60  ARALFFSIPKPDLFL--FNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSA 117
           AR +F + P P   +  +N ++  +  +  P+ ++  +  +       P   T SF    
Sbjct: 38  ARKVFDNTPLPQRTIASWNAMVSAYFESHKPRDALLLFDQM-------PQRNTVSF---- 86

Query: 118 ASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLW 177
                          + ++SGY               K   V  ARKVFD MPE++ V W
Sbjct: 87  ---------------NGMISGY--------------VKNGMVADARKVFDVMPERNVVSW 117

Query: 178 NSMISGLMKNCCFQDSIWVFGDMVR-NGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLG 236
            SM+ G ++    +++  +F +M R N  +W  +  +  +L      +E R+    +   
Sbjct: 118 TSMVRGYVQEGMVEEAEKLFWEMPRRNVVSW--TVMIGGLL------KESRIDDAKKLFD 169

Query: 237 LKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSL 296
           +       V V+T ++  Y + G ++ A  LF ++   ++ +   M+SGY  NG+ + + 
Sbjct: 170 MIP--EKDVVVVTNMIGGYCQVGRLDEARELFDEMKVRNVFTWTTMVSGYAKNGRVDVAR 227

Query: 297 RLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLT-NCIHSFCLKSGIVSNSSVLTALSTV 355
           +LF  +    E   ++ ++G    +   G +        +  +K  +  N  +L      
Sbjct: 228 KLFEVMPERNEVSWTAMLMG----YTQSGRMKEAFELFEAMPVKWIVACNEMILQ----- 278

Query: 356 YSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTV 415
           +    EM  AR +F+   E+   +WNAMI  + + GL  EA+ LF  MQ   VA N  ++
Sbjct: 279 FGLAGEMHRARMMFEGMKERDEGTWNAMIKVFERKGLDLEALGLFARMQREGVALNFPSM 338

Query: 416 SSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSH 475
            S+LS CA L ++  G+ VH  +    F+ ++YV++ LI MY KCG++V A+ +F+    
Sbjct: 339 ISVLSVCASLASLDHGRQVHARLVRSEFDQDLYVASVLITMYVKCGDLVRAKGIFNRFLF 398

Query: 476 KSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEI 535
           K  V WN+MI+GY  HG G EAL +F +M  SG++P  VTF+ VL ACS++G V+EG EI
Sbjct: 399 KDVVMWNSMITGYSQHGLGEEALNVFHDMCSSGVQPDEVTFIGVLSACSYSGKVKEGFEI 458

Query: 536 FQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHK 595
           F++M   +  +P  EHYACMVD+LGRAG++++A+E ++ + +EP   VWGALLGAC  H 
Sbjct: 459 FEAMKCTYQVEPGIEHYACMVDLLGRAGRVDEAMELVEKMPMEPDAIVWGALLGACRNHM 518

Query: 596 DTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLI 655
             +LA VA EKL +L+P+N G +VLLS++Y+ +  +     +R+ +  R++ K PGC+ I
Sbjct: 519 KLDLAEVAVEKLAKLEPKNAGPYVLLSHMYATKGRWRDVEVLRKKI-NRRVIKFPGCSWI 577

Query: 656 EVGGTPHVFTSGD-QLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMK 714
           EV    H+FT GD + HP+   I  MLEKL+G +REAG+  +    LHDV+EEEK   + 
Sbjct: 578 EVEKKVHMFTGGDSKSHPEQHMITQMLEKLSGFLREAGYCPDGSFVLHDVDEEEKTHSLG 637

Query: 715 VHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFK 774
            HSE+LA+A+GL+    G  IR++KNLRVC DCH+A K I+KVTGR I++RDANRFHHFK
Sbjct: 638 YHSERLAVAYGLLKVPEGMPIRVMKNLRVCGDCHSAIKLIAKVTGREIILRDANRFHHFK 697

Query: 775 GGVCSCGDYW 784
            G CSC D+W
Sbjct: 698 DGSCSCKDFW 707


>gi|449455172|ref|XP_004145327.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Cucumis sativus]
 gi|449474033|ref|XP_004154055.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Cucumis sativus]
 gi|449510921|ref|XP_004163811.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Cucumis sativus]
          Length = 649

 Score =  462 bits (1190), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 236/572 (41%), Positives = 352/572 (61%), Gaps = 6/572 (1%)

Query: 219 AVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLIS 278
           + A    L   +++  L +  GF    ++ T L++ +S+   V+ A  +F    +  +  
Sbjct: 78  SAARRNSLSDALDVHQLLVDGGFDQDPFLATKLINMFSELDTVDNARKVFDKTRKRTIYV 137

Query: 279 CNAMISGYTCNGKTESSLRLFRQLL---ASAERVNSSTIV-GLIPVFYPFGHLHLTNCIH 334
            NA+       G+    L L+ ++     S++R   + ++   +        L     IH
Sbjct: 138 WNALFRALALAGRGNDVLELYPRMNMMGVSSDRFTYTYLLKACVASECLVSFLQKGKEIH 197

Query: 335 SFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTE 394
           +  L+ G  ++  V+T L  +Y+R   +  A  +FDE   K++ SW+AMIA Y +NG   
Sbjct: 198 AHILRHGYGAHVHVMTTLMDMYARFGCVSYASAVFDEMPVKNVVSWSAMIACYAKNGKPY 257

Query: 395 EAISLFQEM--QASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTA 452
           EA+ LF+EM        PN VT+ S+L ACA   A+  GK +H  +  R  +S + V +A
Sbjct: 258 EALELFREMMLNTHDSVPNSVTMVSVLQACAAFAALEQGKLIHAYILRRGLDSILPVISA 317

Query: 453 LIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPS 512
           LI MYA+CG +   + +FD M  K  V WN++IS YGLHG+G +A+++F EM+  G  PS
Sbjct: 318 LITMYARCGKLESGQLIFDRMHKKDVVLWNSLISSYGLHGYGRKAIKIFEEMIDHGFSPS 377

Query: 513 GVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFI 572
            ++F+SVL ACSH GLV EG ++F+SM+ +HG +P  EHYACMVD+LGRA +L++A + I
Sbjct: 378 HISFISVLGACSHTGLVEEGKKLFESMVKEHGIQPSVEHYACMVDLLGRANRLDEAAKII 437

Query: 573 KGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYL 632
           + L +EPGP VWG+LLGAC IH    LA  AS++LF+L+P N G +VLL++IY+    + 
Sbjct: 438 EDLRIEPGPKVWGSLLGACRIHCHVELAERASKRLFKLEPTNAGNYVLLADIYAEAEMWD 497

Query: 633 QAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAG 692
           +   V++++  R+L K PG + IEV    + FTS D+ +PQ   ++A+L  L+ +M++ G
Sbjct: 498 EVKRVKKLLDSRELQKVPGRSWIEVRRKIYSFTSVDEFNPQGEQLHALLVNLSNEMKQRG 557

Query: 693 FQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATK 752
           +  +T   L+D+++EEKE ++  HSEKLA+AFGLI T  G  IRI KNLR+C DCH+ TK
Sbjct: 558 YTPQTKLVLYDLDQEEKERIVLGHSEKLAVAFGLINTSKGDTIRITKNLRLCEDCHSVTK 617

Query: 753 FISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           FISK   R I+VRD NRFHHFK GVCSCGDYW
Sbjct: 618 FISKFADREIMVRDLNRFHHFKDGVCSCGDYW 649



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 121/534 (22%), Positives = 233/534 (43%), Gaps = 66/534 (12%)

Query: 5   TPQSRNLFLSLLKGAKTQS--QLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARA 62
            P  +   L +L  A+  S       H  ++  GF  D    TKL +  S+      AR 
Sbjct: 66  NPTQQTCELLILSAARRNSLSDALDVHQLLVDGGFDQDPFLATKLINMFSELDTVDNARK 125

Query: 63  LFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSA--ASA 120
           +F    K  ++++N + R  +        +  Y  +     ++ D FTY+++L A  AS 
Sbjct: 126 VFDKTRKRTIYVWNALFRALALAGRGNDVLELYPRMNM-MGVSSDRFTYTYLLKACVASE 184

Query: 121 CCDRSI--GVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWN 178
           C    +  G  +H H +  GYG+ + V   L+D+Y +F  V  A  VFD+MP K+ V W+
Sbjct: 185 CLVSFLQKGKEIHAHILRHGYGAHVHVMTTLMDMYARFGCVSYASAVFDEMPVKNVVSWS 244

Query: 179 SMISGLMKNCCFQDSIWVFGDMVRNG-GTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGL 237
           +MI+   KN    +++ +F +M+ N   +  +S ++ +VL A A    L  G  I    L
Sbjct: 245 AMIACYAKNGKPYEALELFREMMLNTHDSVPNSVTMVSVLQACAAFAALEQGKLIHAYIL 304

Query: 238 KLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLR 297
           + G    + V++ L++ Y++CG++E  +L+F  + + D++  N++IS Y  +G    +++
Sbjct: 305 RRGLDSILPVISALITMYARCGKLESGQLIFDRMHKKDVVLWNSLISSYGLHGYGRKAIK 364

Query: 298 LFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYS 357
           +F +++                 F P  H+   + + + C  +G+V              
Sbjct: 365 IFEEMIDHG--------------FSP-SHISFISVLGA-CSHTGLV-------------- 394

Query: 358 RLNEMEAARKLF-----DESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNP 412
                E  +KLF     +   + S+  +  M+    +    +EA  + +++   ++ P P
Sbjct: 395 -----EEGKKLFESMVKEHGIQPSVEHYACMVDLLGRANRLDEAAKIIEDL---RIEPGP 446

Query: 413 VTVSSILSACAQLGAISLGKWVH------ELVKSRNFE--SNIYVSTALIDMYAKCGNIV 464
               S+L AC     + L +         E   + N+   ++IY    + D   +   ++
Sbjct: 447 KVWGSLLGACRIHCHVELAERASKRLFKLEPTNAGNYVLLADIYAEAEMWDEVKRVKKLL 506

Query: 465 EARELFDL-----MSHKSEVTWNTMISGYGLHGHGLEAL--QLFSEMLHSGIRP 511
           ++REL  +     +  + ++   T +  +   G  L AL   L +EM   G  P
Sbjct: 507 DSRELQKVPGRSWIEVRRKIYSFTSVDEFNPQGEQLHALLVNLSNEMKQRGYTP 560


>gi|357468161|ref|XP_003604365.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355505420|gb|AES86562.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 874

 Score =  462 bits (1190), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 253/692 (36%), Positives = 389/692 (56%), Gaps = 52/692 (7%)

Query: 130 LHGHAIVSGYGSD-LFVGAALV--------DLYFKFSWVKSARKVFDKMPEKDTVLWNSM 180
           +H   I +G  S+ LF+   ++        D+Y+       ARKVFD++P+    +WN+M
Sbjct: 54  IHSQTIKTGLSSNHLFLTKVIIFCCTKESGDVYY-------ARKVFDEIPQPSVFIWNTM 106

Query: 181 ISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLG 240
           I G  +  C +  + ++  M+ +     D  +   +L    +   L+ G  +    +  G
Sbjct: 107 IKGYSRINCSESGVSLYKLMLVHNIK-PDGFTFPFLLKGFTKDMALKYGKVLLNHAVIHG 165

Query: 241 FHD-HVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLF 299
           F D +++V  G +  +S CG V  A  +F      ++++ N ++SGY    + E S RLF
Sbjct: 166 FLDSNLFVQKGFIHLFSLCGLVNYARKIFDMGDGWEVVTWNVVLSGYNRFKRYEESKRLF 225

Query: 300 RQLLASAERV--NSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVL-TALSTVY 356
            ++    E V  NS T+V ++        L    CI++  +K GIV  + +L  AL  ++
Sbjct: 226 IEMEKKCECVSPNSVTLVLMLSACSKLKDLVGGKCIYNKYIKEGIVEPNLILENALIDMF 285

Query: 357 SRLNEMEAAR-------------------------------KLFDESSEKSLASWNAMIA 385
           +   EM+AAR                               K FD+  E+   SW AMI 
Sbjct: 286 ASCGEMDAARGVFDEMKTRDVISWTSIVTGFANTCRIDLARKYFDQMPERDYVSWTAMID 345

Query: 386 GYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFES 445
           GY +    +E ++LF++MQ S V P+  T+ SIL+ACA LGA+ LG+W    +     ++
Sbjct: 346 GYLRMNRFKEVLTLFRDMQMSNVKPDEFTMVSILTACAHLGALELGEWAKTYIDKNKIKN 405

Query: 446 NIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEML 505
           + ++  ALIDMY KCGN+ +A+++F+ M  K + TW  MI G   +GHG EAL +FS ML
Sbjct: 406 DTFIGNALIDMYFKCGNVEKAKKIFNEMQKKDKFTWTAMIVGLANNGHGEEALTMFSYML 465

Query: 506 HSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQL 565
            + + P  +T++ V+ AC+H GLV +G   F +M   HG KP   HY CMVD+LGRAG L
Sbjct: 466 EASVTPDEITYIGVMCACTHVGLVAKGKHFFSNMAVQHGIKPNLTHYGCMVDLLGRAGHL 525

Query: 566 EKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIY 625
           ++ALE I  + V+P   VWG+LLGAC +HK+  LA +A+ ++ EL+PEN   +VLL NIY
Sbjct: 526 KEALEVIMNMPVKPNSIVWGSLLGACRVHKNVQLAEMAANEILELEPENGAVYVLLCNIY 585

Query: 626 SAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLN 685
           +A + +     VR+++ +R + K PGC+L+E+ G  + F +GD+ HPQS  IYA LE + 
Sbjct: 586 AACKKWKNLHNVRKMMMERGIKKIPGCSLMEMNGIVYEFVAGDKSHPQSKEIYAKLENMK 645

Query: 686 GKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCL 745
             +  AG+  +T     DV EE+KE  + +HSEKLAIA+ LI++  G  IRI+KNLR+C+
Sbjct: 646 QDLSNAGYSPDTSEVFLDVGEEDKETALYMHSEKLAIAYALISSGKGVTIRIVKNLRMCV 705

Query: 746 DCHTATKFISKVTGRVIVVRDANRFHHFKGGV 777
           DCH     +SKV  R ++VRD  RFHHF+ G+
Sbjct: 706 DCHHMAMVVSKVYNRELIVRDKTRFHHFRHGL 737



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 130/517 (25%), Positives = 247/517 (47%), Gaps = 39/517 (7%)

Query: 13  LSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKA--TCYARALFFSIPKP 70
           +SLL+   T  ++ Q H+Q I  G  ++   +TK+       ++    YAR +F  IP+P
Sbjct: 39  ISLLETCNTMYEINQIHSQTIKTGLSSNHLFLTKVIIFCCTKESGDVYYARKVFDEIPQP 98

Query: 71  DLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLL 130
            +F++N +I+G+S     +S +  Y  +  +  + PD FT+ F+L   +       G +L
Sbjct: 99  SVFIWNTMIKGYSRINCSESGVSLYKLMLVHN-IKPDGFTFPFLLKGFTKDMALKYGKVL 157

Query: 131 HGHAIVSGY-GSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCC 189
             HA++ G+  S+LFV    + L+     V  ARK+FD     + V WN ++SG  +   
Sbjct: 158 LNHAVIHGFLDSNLFVQKGFIHLFSLCGLVNYARKIFDMGDGWEVVTWNVVLSGYNRFKR 217

Query: 190 FQDSIWVFGDMVRN-GGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVL 248
           +++S  +F +M +       +S ++  +L A +++++L  G  I    +K G  +   +L
Sbjct: 218 YEESKRLFIEMEKKCECVSPNSVTLVLMLSACSKLKDLVGGKCIYNKYIKEGIVEPNLIL 277

Query: 249 -TGLVSFYSKCGEVERAELLF-----RDIV--------------------------RPDL 276
              L+  ++ CGE++ A  +F     RD++                            D 
Sbjct: 278 ENALIDMFASCGEMDAARGVFDEMKTRDVISWTSIVTGFANTCRIDLARKYFDQMPERDY 337

Query: 277 ISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSF 336
           +S  AMI GY    + +  L LFR +  S  + +  T+V ++      G L L     ++
Sbjct: 338 VSWTAMIDGYLRMNRFKEVLTLFRDMQMSNVKPDEFTMVSILTACAHLGALELGEWAKTY 397

Query: 337 CLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEA 396
             K+ I +++ +  AL  +Y +   +E A+K+F+E  +K   +W AMI G   NG  EEA
Sbjct: 398 IDKNKIKNDTFIGNALIDMYFKCGNVEKAKKIFNEMQKKDKFTWTAMIVGLANNGHGEEA 457

Query: 397 ISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGK-WVHELVKSRNFESNIYVSTALID 455
           +++F  M  + V P+ +T   ++ AC  +G ++ GK +   +      + N+     ++D
Sbjct: 458 LTMFSYMLEASVTPDEITYIGVMCACTHVGLVAKGKHFFSNMAVQHGIKPNLTHYGCMVD 517

Query: 456 MYAKCGNIVEARELFDLMSHK-SEVTWNTMISGYGLH 491
           +  + G++ EA E+   M  K + + W +++    +H
Sbjct: 518 LLGRAGHLKEALEVIMNMPVKPNSIVWGSLLGACRVH 554



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 70/247 (28%), Positives = 122/247 (49%), Gaps = 5/247 (2%)

Query: 327 LHLTNCIHSFCLKSGIVSNSSVLTA--LSTVYSRLNEMEAARKLFDESSEKSLASWNAMI 384
           ++  N IHS  +K+G+ SN   LT   +        ++  ARK+FDE  + S+  WN MI
Sbjct: 48  MYEINQIHSQTIKTGLSSNHLFLTKVIIFCCTKESGDVYYARKVFDEIPQPSVFIWNTMI 107

Query: 385 AGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGK-WVHELVKSRNF 443
            GY++   +E  +SL++ M    + P+  T   +L    +  A+  GK  ++  V     
Sbjct: 108 KGYSRINCSESGVSLYKLMLVHNIKPDGFTFPFLLKGFTKDMALKYGKVLLNHAVIHGFL 167

Query: 444 ESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSE 503
           +SN++V    I +++ CG +  AR++FD+      VTWN ++SGY       E+ +LF E
Sbjct: 168 DSNLFVQKGFIHLFSLCGLVNYARKIFDMGDGWEVVTWNVVLSGYNRFKRYEESKRLFIE 227

Query: 504 MLHS--GIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGR 561
           M      + P+ VT + +L ACS    +  G  I+   I +   +P       ++D+   
Sbjct: 228 MEKKCECVSPNSVTLVLMLSACSKLKDLVGGKCIYNKYIKEGIVEPNLILENALIDMFAS 287

Query: 562 AGQLEKA 568
            G+++ A
Sbjct: 288 CGEMDAA 294



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 112/491 (22%), Positives = 199/491 (40%), Gaps = 82/491 (16%)

Query: 12  FLSLLKG-----AKTQSQLTQTHAQIIIHGFQNDLSTVTK-LAHRLSDFKATCYARALFF 65
           F  LLKG     A    ++   HA  +IHGF +    V K   H  S      YAR +F 
Sbjct: 138 FPFLLKGFTKDMALKYGKVLLNHA--VIHGFLDSNLFVQKGFIHLFSLCGLVNYARKIFD 195

Query: 66  SIPKPDLFLFNVIIRGFSN-NEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDR 124
                ++  +NV++ G++      +S   F    +K   ++P++ T   +LSA S   D 
Sbjct: 196 MGDGWEVVTWNVVLSGYNRFKRYEESKRLFIEMEKKCECVSPNSVTLVLMLSACSKLKDL 255

Query: 125 SIGVLLHGHAIVSG-YGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISG 183
             G  ++   I  G    +L +  AL+D++     + +AR VFD+M  +D + W S+++G
Sbjct: 256 VGGKCIYNKYIKEGIVEPNLILENALIDMFASCGEMDAARGVFDEMKTRDVISWTSIVTG 315

Query: 184 LMKNC-------------------------------CFQDSIWVFGDMVRNGGTWLDSTS 212
               C                                F++ + +F DM +      D  +
Sbjct: 316 FANTCRIDLARKYFDQMPERDYVSWTAMIDGYLRMNRFKEVLTLFRDM-QMSNVKPDEFT 374

Query: 213 VAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIV 272
           + ++L A A +  L LG   +    K    +  ++   L+  Y KCG VE+A+ +F ++ 
Sbjct: 375 MVSILTACAHLGALELGEWAKTYIDKNKIKNDTFIGNALIDMYFKCGNVEKAKKIFNEMQ 434

Query: 273 RPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNC 332
           + D  +  AMI G   NG  E +L +F  +L ++   +  T +G+           +  C
Sbjct: 435 KKDKFTWTAMIVGLANNGHGEEALTMFSYMLEASVTPDEITYIGV-----------MCAC 483

Query: 333 IHSFCLKSG--IVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQN 390
            H   +  G    SN +V   +                     + +L  +  M+    + 
Sbjct: 484 THVGLVAKGKHFFSNMAVQHGI---------------------KPNLTHYGCMVDLLGRA 522

Query: 391 GLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKW-VHELVKSRNFESNIYV 449
           G  +EA+ +   M    V PN +   S+L AC     + L +   +E+++       +YV
Sbjct: 523 GHLKEALEVIMNMP---VKPNSIVWGSLLGACRVHKNVQLAEMAANEILELEPENGAVYV 579

Query: 450 STALIDMYAKC 460
              L ++YA C
Sbjct: 580 --LLCNIYAAC 588


>gi|347954520|gb|AEP33760.1| organelle transcript processing 82, partial [Capsella
           bursa-pastoris]
          Length = 706

 Score =  462 bits (1190), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 258/688 (37%), Positives = 393/688 (57%), Gaps = 37/688 (5%)

Query: 129 LLHGHAIVSGYGSDLFVGAALVD---LYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLM 185
           ++H   I +G  +  +  + L++   L   F  +  A  VFD + E + ++WN+M  G  
Sbjct: 20  IIHAKMIKTGLHNTNYALSKLIEFSVLSPHFDGLTYAISVFDSIQEPNLLIWNTMFRGHA 79

Query: 186 KNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHV 245
            +     +++++  M+ + G   +S +   +L A A+ +  R G +I    LKLG    +
Sbjct: 80  LSSDPVSALYLYVCMI-SLGLVPNSYTFPFLLKACAKSKAFREGQQIHGHVLKLGCDLDL 138

Query: 246 YVLTGLVSFYSKCGEVERAELLF-----RDIVR--------------------------P 274
           YV T L++ Y K G  E A  +F     RD+V                            
Sbjct: 139 YVHTSLIAMYVKNGRXEDARKVFDQSSHRDVVSYTALIKGYASNGYIXSAQKMFDEIPVK 198

Query: 275 DLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIH 334
           D++S NA+ISGY   G  + +L LF++++ +  + + ST+V ++        + L   +H
Sbjct: 199 DVVSWNALISGYAETGNYKEALELFKEMMKTNVKPDESTMVTVLSACAQSASIELGRQVH 258

Query: 335 SFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTE 394
           S+    G  SN  ++ AL  +Y +  E+E A  LF+  S K + SWN +I GYT   L +
Sbjct: 259 SWIDDHGFGSNLKIVNALIDLYIKCGEVETASGLFEGLSYKDVISWNTLIGGYTHMNLYK 318

Query: 395 EAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSR--NFESNIYVSTA 452
           EA+ LFQEM  S  +PN VT+ SIL ACA LGAI +G+W+H  +  R     +   + T+
Sbjct: 319 EALLLFQEMLRSGESPNEVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVSNPSSLRTS 378

Query: 453 LIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPS 512
           LIDMYAKCG+I  A+++FD M ++S  +WN MI G+ +HG    A  +FS M   GI P 
Sbjct: 379 LIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANPAFDIFSRMRKDGIEPD 438

Query: 513 GVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFI 572
            +TF+ +L ACSH+G++  G  IF+SM  D+   P  EHY CM+D+LG +G  ++A E I
Sbjct: 439 DITFVGLLSACSHSGMLDLGRHIFRSMTEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMI 498

Query: 573 KGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYL 632
             + ++P   +W +LL AC +H +  L    ++ L +++P+N G +VLLSNIY+    + 
Sbjct: 499 NSMEMDPDGVIWCSLLKACKMHGNVELGESFAQNLIKIEPKNSGSYVLLSNIYATAGRWN 558

Query: 633 QAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAG 692
           + A  R ++  + + K PGC+ IE+    H F  GD+LHP++  IY MLE++   + EAG
Sbjct: 559 EVAKRRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKLHPRNREIYGMLEEMEVLLEEAG 618

Query: 693 FQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATK 752
           F  +T   L ++EEE KE  ++ HSEKLAIAFGLI+T+PGT++ I+KNLRVC +CH ATK
Sbjct: 619 FVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATK 678

Query: 753 FISKVTGRVIVVRDANRFHHFKGGVCSC 780
            ISK+  R I+ RD  RFHHF  GVCSC
Sbjct: 679 LISKIYKREIIARDRTRFHHFXDGVCSC 706



 Score =  229 bits (585), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 147/519 (28%), Positives = 258/519 (49%), Gaps = 40/519 (7%)

Query: 13  LSLLKGAKTQSQLTQTHAQIIIHGFQND---LSTVTKLAHRLSDFKATCYARALFFSIPK 69
           LSLL   KT   L   HA++I  G  N    LS + + +     F    YA ++F SI +
Sbjct: 6   LSLLHNCKTLQSLRIIHAKMIKTGLHNTNYALSKLIEFSVLSPHFDGLTYAISVFDSIQE 65

Query: 70  PDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVL 129
           P+L ++N + RG + +  P S++  Y  +  +  L P+++T+ F+L A +       G  
Sbjct: 66  PNLLIWNTMFRGHALSSDPVSALYLYVCM-ISLGLVPNSYTFPFLLKACAKSKAFREGQQ 124

Query: 130 LHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDK--------------------- 168
           +HGH +  G   DL+V  +L+ +Y K    + ARKVFD+                     
Sbjct: 125 IHGHVLKLGCDLDLYVHTSLIAMYVKNGRXEDARKVFDQSSHRDVVSYTALIKGYASNGY 184

Query: 169 ----------MPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLP 218
                     +P KD V WN++ISG  +   +++++ +F +M++      D +++  VL 
Sbjct: 185 IXSAQKMFDEIPVKDVVSWNALISGYAETGNYKEALELFKEMMKT-NVKPDESTMVTVLS 243

Query: 219 AVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLIS 278
           A A+   + LG ++       GF  ++ ++  L+  Y KCGEVE A  LF  +   D+IS
Sbjct: 244 ACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETASGLFEGLSYKDVIS 303

Query: 279 CNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCL 338
            N +I GYT     + +L LF+++L S E  N  T++ ++P     G + +   IH +  
Sbjct: 304 WNTLIGGYTHMNLYKEALLLFQEMLRSGESPNEVTMLSILPACAHLGAIDIGRWIHVYID 363

Query: 339 K--SGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEA 396
           K   G+ + SS+ T+L  +Y++  ++EAA+++FD    +SL+SWNAMI G+  +G    A
Sbjct: 364 KRLKGVSNPSSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANPA 423

Query: 397 ISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWV-HELVKSRNFESNIYVSTALID 455
             +F  M+   + P+ +T   +LSAC+  G + LG+ +   + +       +     +ID
Sbjct: 424 FDIFSRMRKDGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTEDYKITPKLEHYGCMID 483

Query: 456 MYAKCGNIVEARELFDLMSHKSE-VTWNTMISGYGLHGH 493
           +    G   EA E+ + M    + V W +++    +HG+
Sbjct: 484 LLGHSGLFKEAEEMINSMEMDPDGVIWCSLLKACKMHGN 522



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 110/420 (26%), Positives = 194/420 (46%), Gaps = 40/420 (9%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           A+ +F  IP  D+  +N +I G++     K ++  +  + K T + PD  T   VLSA +
Sbjct: 188 AQKMFDEIPVKDVVSWNALISGYAETGNYKEALELFKEMMK-TNVKPDESTMVTVLSACA 246

Query: 120 ACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNS 179
                 +G  +H      G+GS+L +  AL+DLY K   V++A  +F+ +  KD + WN+
Sbjct: 247 QSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETASGLFEGLSYKDVISWNT 306

Query: 180 MISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKL 239
           +I G      +++++ +F +M+R+G +  +  ++ ++LPA A +  + +G  I     K 
Sbjct: 307 LIGGYTHMNLYKEALLLFQEMLRSGES-PNEVTMLSILPACAHLGAIDIGRWIHVYIDKR 365

Query: 240 --GFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLR 297
             G  +   + T L+  Y+KCG++E A+ +F  ++   L S NAMI G+  +G+   +  
Sbjct: 366 LKGVSNPSSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANPAFD 425

Query: 298 LFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYS 357
           +F ++       +  T VGL           L+ C HS  L  G             ++ 
Sbjct: 426 IFSRMRKDGIEPDDITFVGL-----------LSACSHSGMLDLG-----------RHIFR 463

Query: 358 RLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSS 417
            + E        D      L  +  MI     +GL +EA  +   M+   + P+ V   S
Sbjct: 464 SMTE--------DYKITPKLEHYGCMIDLLGHSGLFKEAEEMINSME---MDPDGVIWCS 512

Query: 418 ILSACAQLGAISLGK-WVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHK 476
           +L AC   G + LG+ +   L+K     S  YV   L ++YA  G   E  +   L++ K
Sbjct: 513 LLKACKMHGNVELGESFAQNLIKIEPKNSGSYV--LLSNIYATAGRWNEVAKRRALLNDK 570


>gi|125584568|gb|EAZ25232.1| hypothetical protein OsJ_09035 [Oryza sativa Japonica Group]
          Length = 674

 Score =  462 bits (1190), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 232/510 (45%), Positives = 329/510 (64%), Gaps = 15/510 (2%)

Query: 285 GYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFG------HLHLTNCIHSFCL 338
           GY  N     SL LFR ++AS    +S+++V        F          +T  +H+   
Sbjct: 170 GYVRNNLVYHSLELFRAMIAS----DSASVVDEAAALVAFSASARVPDRGVTASLHALIA 225

Query: 339 KSGIVSNSSVLTALSTVYSR--LNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEA 396
           K G   N+ V+  +   Y++    ++E ARK+FD + E+ + SWN+MIA Y QNG++ EA
Sbjct: 226 KIGFERNAGVVNTMLDSYAKGGSRDLEVARKVFD-TMERDVVSWNSMIALYAQNGMSAEA 284

Query: 397 ISLFQEM--QASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALI 454
           I L+ +M      +  N V +S++L ACA  GAI  GK +H  V     E N+YV T+++
Sbjct: 285 IGLYSKMLNVGGGIKCNAVALSAVLLACAHAGAIQTGKRIHNQVVRMGLEENVYVGTSIV 344

Query: 455 DMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGV 514
           DMY+KCG +  A   F  +  K+ ++W+ MI+GYG+HG G EAL++F+EM  SG+RP+ +
Sbjct: 345 DMYSKCGRVEMASRAFRKIKEKNILSWSAMITGYGMHGRGQEALEIFTEMKRSGLRPNYI 404

Query: 515 TFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKG 574
           TF+SVL ACSHAGL+ EG   + +M  + G +   EHY CMVD+LGRAG L++A   IK 
Sbjct: 405 TFISVLAACSHAGLLDEGRYWYNAMKQEFGIEAGVEHYGCMVDLLGRAGCLDEAYSLIKE 464

Query: 575 LAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQA 634
           + V+P  A+WGALL AC IHK+  LA ++ ++LFELD  N GY+VLLSNIY+  R +   
Sbjct: 465 MKVKPDAAIWGALLSACRIHKNVELAEMSVKRLFELDASNSGYYVLLSNIYAEARMWKDV 524

Query: 635 ATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQ 694
             +R +VK R++ K PG +  E+ G  ++F  GD+ HPQ   IY+ LEKL  +M+EAG+ 
Sbjct: 525 ERIRLLVKTRRIEKPPGYSSFELKGKIYLFYVGDKSHPQHIEIYSYLEKLLERMQEAGYV 584

Query: 695 TETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFI 754
             T + LHD++EEEKE  +++HSEKLA+AF L+ + P + I IIKNLRVC DCHTA KFI
Sbjct: 585 PNTGSVLHDLDEEEKESALRIHSEKLAVAFALMNSVPRSVIHIIKNLRVCSDCHTAMKFI 644

Query: 755 SKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           +K+T R I++RD  RFHHFK G+CSC DYW
Sbjct: 645 TKITEREIIIRDLQRFHHFKDGLCSCRDYW 674



 Score =  115 bits (288), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 96/342 (28%), Positives = 158/342 (46%), Gaps = 37/342 (10%)

Query: 84  NNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDL 143
           NN +  S   F   +  ++A   D        SA++   DR +   LH      G+  + 
Sbjct: 174 NNLVYHSLELFRAMIASDSASVVDEAAALVAFSASARVPDRGVTASLHALIAKIGFERNA 233

Query: 144 FVGAALVDLYFKFSW--VKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMV 201
            V   ++D Y K     ++ ARKVFD M E+D V WNSMI+   +N    ++I ++  M+
Sbjct: 234 GVVNTMLDSYAKGGSRDLEVARKVFDTM-ERDVVSWNSMIALYAQNGMSAEAIGLYSKML 292

Query: 202 R-NGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGE 260
              GG   ++ +++AVL A A    ++ G  I    +++G  ++VYV T +V  YSKCG 
Sbjct: 293 NVGGGIKCNAVALSAVLLACAHAGAIQTGKRIHNQVVRMGLEENVYVGTSIVDMYSKCGR 352

Query: 261 VERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPV 320
           VE A   FR I   +++S +AMI+GY  +G+ + +L +F ++  S  R N  T + +   
Sbjct: 353 VEMASRAFRKIKEKNILSWSAMITGYGMHGRGQEALEIFTEMKRSGLRPNYITFISV--- 409

Query: 321 FYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASW 380
                   L  C H+  L  G              Y+ + +        +   E  +  +
Sbjct: 410 --------LAACSHAGLLDEG-----------RYWYNAMKQ--------EFGIEAGVEHY 442

Query: 381 NAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSAC 422
             M+    + G  +EA SL +EM   KV P+     ++LSAC
Sbjct: 443 GCMVDLLGRAGCLDEAYSLIKEM---KVKPDAAIWGALLSAC 481


>gi|4455294|emb|CAB36829.1| putative protein [Arabidopsis thaliana]
 gi|7268069|emb|CAB78407.1| putative protein [Arabidopsis thaliana]
          Length = 1024

 Score =  462 bits (1190), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 265/789 (33%), Positives = 424/789 (53%), Gaps = 16/789 (2%)

Query: 3    MKTPQSRNLFLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARA 62
            M TP + +  LS  K  ++     Q H  ++  GF +D      L            A  
Sbjct: 245  MPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEH 304

Query: 63   LFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACC 122
            +F ++ + D   +N +I G S     + ++  +  +  +  L PD+ T + ++ A SA  
Sbjct: 305  IFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLD-GLEPDSNTLASLVVACSADG 363

Query: 123  DRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMI- 181
                G  LH +    G+ S+  +  AL++LY K + +++A   F +   ++ VLWN M+ 
Sbjct: 364  TLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLV 423

Query: 182  -SGLMKNCCFQDSIWVFGDM-----VRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCL 235
              GL+ +   ++S  +F  M     V N  T+       ++L     + +L LG +I   
Sbjct: 424  AYGLLDD--LRNSFRIFRQMQIEEIVPNQYTY------PSILKTCIRLGDLELGEQIHSQ 475

Query: 236  GLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESS 295
             +K  F  + YV + L+  Y+K G+++ A  +       D++S   MI+GYT     + +
Sbjct: 476  IIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKA 535

Query: 296  LRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTV 355
            L  FRQ+L    R +   +   +        L     IH+    SG  S+     AL T+
Sbjct: 536  LTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTL 595

Query: 356  YSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTV 415
            YSR  ++E +   F+++      +WNA+++G+ Q+G  EEA+ +F  M    +  N  T 
Sbjct: 596  YSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTF 655

Query: 416  SSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSH 475
             S + A ++   +  GK VH ++    ++S   V  ALI MYAKCG+I +A + F  +S 
Sbjct: 656  GSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVST 715

Query: 476  KSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEI 535
            K+EV+WN +I+ Y  HG G EAL  F +M+HS +RP+ VT + VL ACSH GLV +G   
Sbjct: 716  KNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAY 775

Query: 536  FQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHK 595
            F+SM  ++G  P  EHY C+VD+L RAG L +A EFI+ + ++P   VW  LL AC++HK
Sbjct: 776  FESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHK 835

Query: 596  DTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLI 655
            +  +   A+  L EL+PE+   +VLLSN+Y+  + +      RQ +K++ + K PG + I
Sbjct: 836  NMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWI 895

Query: 656  EVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKV 715
            EV  + H F  GDQ HP +  I+   + L  +  E G+  +  + L++++ E+K+ ++ +
Sbjct: 896  EVKNSIHSFYVGDQNHPLADEIHEYFQDLTKRASEIGYVQDCFSLLNELQHEQKDPIIFI 955

Query: 716  HSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKG 775
            HSEKLAI+FGL++      I ++KNLRVC DCH   KF+SKV+ R I+VRDA RFHHF+G
Sbjct: 956  HSEKLAISFGLLSLPATVPINVMKNLRVCNDCHAWIKFVSKVSNREIIVRDAYRFHHFEG 1015

Query: 776  GVCSCGDYW 784
            G CSC DYW
Sbjct: 1016 GACSCKDYW 1024



 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 153/571 (26%), Positives = 272/571 (47%), Gaps = 6/571 (1%)

Query: 25  LTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSN 84
           + Q HA+I+  G ++       L    S       AR +F  +   D   +  +I G S 
Sbjct: 166 VEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSK 225

Query: 85  NEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLF 144
           NE    +I  +  +     + P  + +S VLSA        IG  LHG  +  G+ SD +
Sbjct: 226 NECEAEAIRLFCDMYV-LGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTY 284

Query: 145 VGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNG 204
           V  ALV LYF    + SA  +F  M ++D V +N++I+GL +    + ++ +F  M  + 
Sbjct: 285 VCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLD- 343

Query: 205 GTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERA 264
           G   DS ++A+++ A +    L  G ++     KLGF  +  +   L++ Y+KC ++E A
Sbjct: 344 GLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETA 403

Query: 265 ELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPF 324
              F +    +++  N M+  Y       +S R+FRQ+       N  T   ++      
Sbjct: 404 LDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRL 463

Query: 325 GHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMI 384
           G L L   IHS  +K+    N+ V + L  +Y++L +++ A  +    + K + SW  MI
Sbjct: 464 GDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMI 523

Query: 385 AGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFE 444
           AGYTQ    ++A++ F++M    +  + V +++ +SACA L A+  G+ +H       F 
Sbjct: 524 AGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFS 583

Query: 445 SNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEM 504
           S++    AL+ +Y++CG I E+   F+       + WN ++SG+   G+  EAL++F  M
Sbjct: 584 SDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRM 643

Query: 505 LHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQ 564
              GI  +  TF S + A S    +++G ++  ++I   G+    E    ++ +  + G 
Sbjct: 644 NREGIDNNNFTFGSAVKAASETANMKQGKQV-HAVITKTGYDSETEVCNALISMYAKCGS 702

Query: 565 LEKALEFIKGLAVEPGPAV-WGALLGACMIH 594
           +  A +  + L V     V W A++ A   H
Sbjct: 703 ISDAEK--QFLEVSTKNEVSWNAIINAYSKH 731



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 128/488 (26%), Positives = 220/488 (45%), Gaps = 30/488 (6%)

Query: 100 KNTALTPDNFTYSFVLSAASACCDRSIGVL-----LHGHAIVSGYGSDLFVGAALVDLYF 154
           +N  + P++ T  ++L      C ++ G L     LH   +  G  S+  +   L D Y 
Sbjct: 36  ENRGIRPNHQTLKWLLEG----CLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYL 91

Query: 155 KFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVA 214
               +  A KVFD+MPE+    WN MI  L       +   +F  MV    T  + T   
Sbjct: 92  FKGDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSG 151

Query: 215 AVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRP 274
            +           +  +I    L  G  D   V   L+  YS+ G V+ A  +F  +   
Sbjct: 152 VLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLK 211

Query: 275 DLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFG--------- 325
           D  S  AMISG + N     ++RLF  +           ++G++P  Y F          
Sbjct: 212 DHSSWVAMISGLSKNECEAEAIRLFCDMY----------VLGIMPTPYAFSSVLSACKKI 261

Query: 326 -HLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMI 384
             L +   +H   LK G  S++ V  AL ++Y  L  + +A  +F   S++   ++N +I
Sbjct: 262 ESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLI 321

Query: 385 AGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFE 444
            G +Q G  E+A+ LF+ M    + P+  T++S++ AC+  G +  G+ +H       F 
Sbjct: 322 NGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFA 381

Query: 445 SNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEM 504
           SN  +  AL+++YAKC +I  A + F     ++ V WN M+  YGL      + ++F +M
Sbjct: 382 SNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQM 441

Query: 505 LHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQ 564
               I P+  T+ S+L  C   G +  G++I   +I  + F+  A   + ++D+  + G+
Sbjct: 442 QIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTN-FQLNAYVCSVLIDMYAKLGK 500

Query: 565 LEKALEFI 572
           L+ A + +
Sbjct: 501 LDTAWDIL 508



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 115/427 (26%), Positives = 200/427 (46%), Gaps = 6/427 (1%)

Query: 199 DMVRNGGTWLDSTSVAAVLPAVAEVQ-ELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSK 257
           D V N G   +  ++  +L    +    L  G ++    LKLG   +  +   L  FY  
Sbjct: 33  DSVENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLF 92

Query: 258 CGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGL 317
            G++  A  +F ++    + + N MI              LF ++++     N  T  G+
Sbjct: 93  KGDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGV 152

Query: 318 IPVFYPFG-HLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKS 376
           +           +   IH+  L  G+  ++ V   L  +YSR   ++ AR++FD    K 
Sbjct: 153 LEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKD 212

Query: 377 LASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHE 436
            +SW AMI+G ++N    EAI LF +M    + P P   SS+LSAC ++ ++ +G+ +H 
Sbjct: 213 HSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHG 272

Query: 437 LVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLE 496
           LV    F S+ YV  AL+ +Y   GN++ A  +F  MS +  VT+NT+I+G    G+G +
Sbjct: 273 LVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEK 332

Query: 497 ALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMV 556
           A++LF  M   G+ P   T  S++ ACS  G +  G ++  +     GF    +    ++
Sbjct: 333 AMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQL-HAYTTKLGFASNNKIEGALL 391

Query: 557 DILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKD-TNLARVASE-KLFELDPEN 614
           ++  +   +E AL++     VE    +W  +L A  +  D  N  R+  + ++ E+ P  
Sbjct: 392 NLYAKCADIETALDYFLETEVE-NVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQ 450

Query: 615 VGYHVLL 621
             Y  +L
Sbjct: 451 YTYPSIL 457


>gi|116308873|emb|CAH66009.1| H0613H07.7 [Oryza sativa Indica Group]
 gi|116317921|emb|CAH65944.1| H0716A07.2 [Oryza sativa Indica Group]
          Length = 854

 Score =  462 bits (1189), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 269/696 (38%), Positives = 402/696 (57%), Gaps = 22/696 (3%)

Query: 108 NFTYSFVLSAAS----ACCDRSIGVLLHGHAIVSG--YGSDLFVGAALVDLYFKFSWVKS 161
           +FT   VL A S    A     +G   H  A+ +G  +G   F   AL+ +Y +   V  
Sbjct: 162 SFTLVSVLRAVSHLPAAAAAVRLGREAHAFALKNGLLHGHQRFAFNALLSMYARLGLVAD 221

Query: 162 ARKVF-DKMPEK-DTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPA 219
           A+++F    P + D V WN+M+S L+++  F +++    DMV  G    D  + A+ LPA
Sbjct: 222 AQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALG-VRPDGVTFASALPA 280

Query: 220 VAEVQELRLGMEIQCLGLKLG-FHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPD--- 275
            + ++ L +G E+    +K      + +V + LV  Y+   +V +A  +F D+V PD   
Sbjct: 281 CSRLELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKARQVF-DMV-PDSGK 338

Query: 276 -LISCNAMISGYTCNGKTESSLRLFRQLLASAERVN-SSTIVGLIPVFYPFGHLHLTNCI 333
            L   NAMI GY   G  E +LRLF ++ A A  V   +T+  ++P             +
Sbjct: 339 QLGMWNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPACARSEAFAGKEAV 398

Query: 334 HSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLT 393
           H + +K G+  N  V  AL  +Y+RL + + AR++F       + SWN +I G    G  
Sbjct: 399 HGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQGHV 458

Query: 394 EEAISLFQEMQA---SKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVS 450
            +A  L +EMQ      V PN +T+ ++L  CA L A + GK +H        ++++ V 
Sbjct: 459 ADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGYAVRHALDTDVAVG 518

Query: 451 TALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSG-I 509
           +AL+DMYAKCG +  +R +FD +  ++ +TWN +I  YG+HG G EA  LF  M  SG  
Sbjct: 519 SALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEA 578

Query: 510 RPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKAL 569
           RP+ VTF++ L ACSH+G+V  G ++F +M  DHG +P  +  AC+VDILGRAG+L++A 
Sbjct: 579 RPNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILACVVDILGRAGRLDEAY 638

Query: 570 EFIKGL-AVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAE 628
             +  + A E   + W  +LGAC +H++ +L  +A E+L EL+PE   ++VLL NIYSA 
Sbjct: 639 AMVTSMEAGEQQVSAWSTMLGACRLHRNVHLGEIAGERLLELEPEEASHYVLLCNIYSAA 698

Query: 629 RDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKM 688
             + +AA VR  +++R +AK PGC+ IEV G  H F +G+  HP S  ++A +E L G+M
Sbjct: 699 GQWTRAAEVRSRMRRRGVAKEPGCSWIEVDGAIHRFMAGESAHPASEEVHAHMEALWGEM 758

Query: 689 REAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCH 748
              G+  +T   LHD+++ +K  +++ HSEKLAIAFGL+   PG  IR+ KNLRVC DCH
Sbjct: 759 VARGYTPDTSCVLHDMDDGDKAAVLRCHSEKLAIAFGLLRAAPGATIRVAKNLRVCNDCH 818

Query: 749 TATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
            A KF+SK+ GR IV+RD  RFHHF+ G CSCGDYW
Sbjct: 819 EAAKFLSKMVGREIVLRDVRRFHHFRNGQCSCGDYW 854



 Score = 65.9 bits (159), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 49/239 (20%), Positives = 100/239 (41%), Gaps = 3/239 (1%)

Query: 29  HAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNEMP 88
           H  ++  G   +      L    +    T  AR +F  +  PD+  +N +I G       
Sbjct: 399 HGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQGHV 458

Query: 89  KSSICFYTHLRK--NTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVG 146
             +      +++     + P+  T   +L   +     + G  +HG+A+     +D+ VG
Sbjct: 459 ADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGYAVRHALDTDVAVG 518

Query: 147 AALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGT 206
           +ALVD+Y K   +  +R VFD++P ++T+ WN +I     +    ++  +F  M  +G  
Sbjct: 519 SALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEA 578

Query: 207 WLDSTSVAAVLPAVAEVQELRLGMEI-QCLGLKLGFHDHVYVLTGLVSFYSKCGEVERA 264
             +  +  A L A +    +  G+++   +    G      +L  +V    + G ++ A
Sbjct: 579 RPNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILACVVDILGRAGRLDEA 637


>gi|449453750|ref|XP_004144619.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g09950-like [Cucumis sativus]
 gi|449506934|ref|XP_004162888.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g09950-like [Cucumis sativus]
          Length = 1067

 Score =  462 bits (1188), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 264/770 (34%), Positives = 423/770 (54%), Gaps = 15/770 (1%)

Query: 25   LTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSN 84
            L Q   ++   GF +DL   + L    +   +  YA+ +F  +   ++   N +I G   
Sbjct: 303  LEQLLTRVEKSGFLHDLYVGSALVSGFAKAGSIGYAKNIFQKMSYRNVVSLNGLIIGLVR 362

Query: 85   NEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASAC----CDRSIGVLLHGHAIVSGY- 139
             +  + ++  +  ++ +  L P+  +Y  +L+A          +  G  +H   I SG  
Sbjct: 363  QKRGEEAVELFMEMKDSVELNPN--SYMIILTAFPEFHVLENGKRKGSEVHAFLIRSGLL 420

Query: 140  GSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGD 199
             + + +G  L+++Y K   +  A  VF  M  KD+V WNSMI+GL +N  F +++  F +
Sbjct: 421  NAQIAIGNGLINMYAKCGAINDACVVFRLMDNKDSVTWNSMITGLDQNKQFLEAVKTFQE 480

Query: 200  MVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCG 259
            M R    +  + ++ + L + A +  + +G ++ C GLKLG    V V   L++ Y +CG
Sbjct: 481  M-RRTELYPSNFTMISALSSCASLGWISVGEQLHCEGLKLGLDLDVSVSNALLALYGECG 539

Query: 260  EVERAELLFRDIVRPDLISCNAMISGYTCNGKTE-SSLRLFRQLLASAERVNSSTIVGLI 318
             V+  +  F  ++  D +S N++I     +  +   ++  F  ++ +    N  T + ++
Sbjct: 540  YVKECQKAFSLMLDYDHVSWNSLIGALADSEPSMLEAVESFLVMMRAGWDPNRVTFITIL 599

Query: 319  PVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEK-SL 377
                      L   IH+  LK  + +++++  AL   Y +  +M     +F   S++   
Sbjct: 600  AAVSSLSLHELGKQIHALVLKRNVAADTAIENALLACYGKCGDMGYCENIFSRMSDRQDE 659

Query: 378  ASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHEL 437
             SWN+MI+GY  N L  +A+ +   M       +  T +++LSACA +  +  G  VH  
Sbjct: 660  VSWNSMISGYIHNELLPKAMDMVWFMMQKGQRLDGFTFATVLSACATVATLERGMEVHGC 719

Query: 438  VKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEA 497
                  ES+I + +AL+DMYAKCG I  A   F++M  ++  +WN+MISGY  HGHG ++
Sbjct: 720  SVRACLESDIVIGSALVDMYAKCGRIDYASRFFEMMPARNLYSWNSMISGYARHGHGTKS 779

Query: 498  LQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVD 557
            L LF++M   G  P  VTF+ VL ACSHAGLV EG   F SM   +G  P  EH++CMVD
Sbjct: 780  LDLFAQMKLQGPLPDHVTFVGVLSACSHAGLVNEGFSHFDSMSEIYGLAPRMEHFSCMVD 839

Query: 558  ILGRAGQLEKALEFIKGLAVEPGPAVWGALLGAC--MIHKDTNLARVASEKLFELDPENV 615
            +LGR G+L K  +F+  + V+P   +W  +LGAC     ++T L R A+E L E++P N 
Sbjct: 840  LLGRVGELNKMEDFLNQMPVKPNVLIWRTVLGACCRANGRNTALGRRAAEMLLEMEPTNA 899

Query: 616  GYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQST 675
              ++LLSN+Y++   +   A  R  ++K  + K  GC+ + +    HVF +GD+ HP+  
Sbjct: 900  VNYILLSNMYASGGKWDDVAKTRVAMRKAFVKKEAGCSWVTMKDGVHVFVAGDKSHPEKD 959

Query: 676  AIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGT-E 734
             IY  L++LNGKMR AG+  ET  AL+D+E E KE ++  HSEK+A+AF  + T P    
Sbjct: 960  LIYEKLKELNGKMRLAGYIPETRFALYDLEGESKEELLSYHSEKIAVAF--VLTRPSKMP 1017

Query: 735  IRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
            IRI+KNLRVC DCH+A K+IS++  R IV+RD+NRFHHF+ G CSCGD+W
Sbjct: 1018 IRILKNLRVCGDCHSAFKYISQIVERQIVLRDSNRFHHFENGKCSCGDFW 1067



 Score =  178 bits (452), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 154/542 (28%), Positives = 259/542 (47%), Gaps = 36/542 (6%)

Query: 130 LHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCC 189
           LH     +G+ +DLF+   L+++Y +   + S RKVFD+MP ++ V W+ +ISG  +N  
Sbjct: 95  LHLQLFKNGFVNDLFLCNTLINIYARVGDLGSGRKVFDEMPLRNLVSWSCLISGYTRNRM 154

Query: 190 FQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQE--LRLGMEIQCLGLKLGFHDHVYV 247
             ++  +F  MV + G   +  +  +V+ A  E  E  L+ GM+I  L  K  + + V  
Sbjct: 155 PNEACELFRKMVSD-GFMPNHYAFGSVIRACQECGEYGLKFGMQIHGLMSKTQYVNDVTA 213

Query: 248 LTGLVSFYSKC-GEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLF----RQL 302
              L+S Y    G V+ A   F  I   +L+S N+MIS Y   G   S+  +F    +++
Sbjct: 214 SNVLISMYGNALGMVDYARRAFDSIWPRNLVSLNSMISVYCQRGDAVSAFDIFSTMQKEV 273

Query: 303 LASAERVNSSTIVGLIPVFYPFGH--LHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLN 360
           +    + N  T   LI       +  L L   + +   KSG + +  V +AL + +++  
Sbjct: 274 MGDGLKPNEYTFGSLISATCSLANSGLVLLEQLLTRVEKSGFLHDLYVGSALVSGFAKAG 333

Query: 361 EMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILS 420
            +  A+ +F + S +++ S N +I G  +    EEA+ LF EM+ S V  NP +   IL+
Sbjct: 334 SIGYAKNIFQKMSYRNVVSLNGLIIGLVRQKRGEEAVELFMEMKDS-VELNPNSYMIILT 392

Query: 421 ACAQLGAISLGKW----VHE-LVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSH 475
           A  +   +  GK     VH  L++S    + I +   LI+MYAKCG I +A  +F LM +
Sbjct: 393 AFPEFHVLENGKRKGSEVHAFLIRSGLLNAQIAIGNGLINMYAKCGAINDACVVFRLMDN 452

Query: 476 KSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEI 535
           K  VTWN+MI+G   +   LEA++ F EM  + + PS  T +S L +C+  G +  G++ 
Sbjct: 453 KDSVTWNSMITGLDQNKQFLEAVKTFQEMRRTELYPSNFTMISALSSCASLGWISVGEQ- 511

Query: 536 FQSMIHDHGFK-------PLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALL 588
               +H  G K        ++     +    G   + +KA      L ++     W +L+
Sbjct: 512 ----LHCEGLKLGLDLDVSVSNALLALYGECGYVKECQKAFS----LMLDYDHVSWNSLI 563

Query: 589 GACMIHKDTNLARVASEKLF---ELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRK 645
           GA    + + L  V S  +      DP  V +  +L+ + S     L    +  +V KR 
Sbjct: 564 GALADSEPSMLEAVESFLVMMRAGWDPNRVTFITILAAVSSLSLHEL-GKQIHALVLKRN 622

Query: 646 LA 647
           +A
Sbjct: 623 VA 624


>gi|255586261|ref|XP_002533783.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526284|gb|EEF28596.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 672

 Score =  462 bits (1188), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 243/643 (37%), Positives = 372/643 (57%), Gaps = 2/643 (0%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           AR LF  +P  D  L+NV++ GF     P S++  +  +R N    P++ T++ VLS  +
Sbjct: 26  ARRLFDKMPNKDCVLWNVMLNGFVKCGEPNSAVKVFEDMR-NCQTKPNSITFASVLSICA 84

Query: 120 ACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNS 179
           +      G  LHG  I  G+  D  V  ALV +Y KF  +  A K+F+ MP+ + V WN 
Sbjct: 85  SEALSEFGNQLHGLVISCGFHFDPLVANALVAMYSKFGQLSDALKLFNTMPDTNVVTWNG 144

Query: 180 MISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKL 239
           MI+G ++N    ++  +F +M+ + G   DS + A+ LP+V E   L+ G EI    L+ 
Sbjct: 145 MIAGFVQNGFMDEASLLFSEMI-SAGVSPDSITFASFLPSVTESASLKQGKEIHGYILRH 203

Query: 240 GFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLF 299
           G    V++ + L+  Y KC +V  A  +F+     D++ C A+ISGY  NG    +L +F
Sbjct: 204 GIALDVFLKSALIDIYFKCRDVGMACKIFKQSTNVDIVVCTAIISGYVLNGLNNDALEIF 263

Query: 300 RQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRL 359
           R LL      N+ T+  ++P       L+L   +H+  LK G+     V +A+  +Y++ 
Sbjct: 264 RWLLEEKMSPNAVTLASVLPACAGLATLNLGKELHANILKHGLDERRHVGSAIMDMYAKC 323

Query: 360 NEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSIL 419
             ++ A ++F    EK    WNA+I   +QNG  +EAI LF++M    ++ + V++S+ L
Sbjct: 324 GRLDLAYQIFRRMPEKDAVCWNAIITNCSQNGKPQEAIDLFRQMGREGLSYDCVSISAAL 383

Query: 420 SACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEV 479
           SACA L A+  GK +H  +    F+S ++  +ALIDMY KCGN+  AR +FD+M  K+EV
Sbjct: 384 SACANLPALHHGKAIHSFMIKGAFDSEVFAESALIDMYGKCGNLSVARCVFDMMREKNEV 443

Query: 480 TWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSM 539
           +WN++I+ YG HGH   +L LF +ML  GI+P  VTFL++L AC HAG V +G + F+ M
Sbjct: 444 SWNSIIAAYGSHGHLEVSLALFHKMLEDGIQPDHVTFLTILSACGHAGQVDKGIQYFRCM 503

Query: 540 IHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNL 599
             ++G     EHYAC+VD+ GRAG+L +A E IK +   P   VWG LLGAC +H +  L
Sbjct: 504 TEEYGIPARMEHYACIVDLFGRAGRLNEAFETIKNMPFSPDDGVWGTLLGACRVHGNVEL 563

Query: 600 ARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGG 659
           A VAS  L +LDPEN G +VLLSN+++    +     +R ++KKR + K PG + IEV  
Sbjct: 564 AEVASRCLLDLDPENSGCYVLLSNVHADAGQWGSVRKIRSLMKKRGVQKVPGYSWIEVNK 623

Query: 660 TPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALH 702
           T H+F + D  HP+S  IY++L  L  ++R+ G+  +    +H
Sbjct: 624 TTHMFVAADGSHPESAQIYSVLNNLLLELRKEGYCPKPYLPMH 666



 Score =  238 bits (607), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 147/487 (30%), Positives = 252/487 (51%), Gaps = 5/487 (1%)

Query: 138 GYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVF 197
           G+  D FVG++L+ LY +   ++ AR++FDKMP KD VLWN M++G +K      ++ VF
Sbjct: 2   GFNVDEFVGSSLIKLYAENGCIEDARRLFDKMPNKDCVLWNVMLNGFVKCGEPNSAVKVF 61

Query: 198 GDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSK 257
            DM RN  T  +S + A+VL   A       G ++  L +  GFH    V   LV+ YSK
Sbjct: 62  EDM-RNCQTKPNSITFASVLSICASEALSEFGNQLHGLVISCGFHFDPLVANALVAMYSK 120

Query: 258 CGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGL 317
            G++  A  LF  +   ++++ N MI+G+  NG  + +  LF +++++    +S T    
Sbjct: 121 FGQLSDALKLFNTMPDTNVVTWNGMIAGFVQNGFMDEASLLFSEMISAGVSPDSITFASF 180

Query: 318 IPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSL 377
           +P       L     IH + L+ GI  +  + +AL  +Y +  ++  A K+F +S+   +
Sbjct: 181 LPSVTESASLKQGKEIHGYILRHGIALDVFLKSALIDIYFKCRDVGMACKIFKQSTNVDI 240

Query: 378 ASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHEL 437
               A+I+GY  NGL  +A+ +F+ +   K++PN VT++S+L ACA L  ++LGK +H  
Sbjct: 241 VVCTAIISGYVLNGLNNDALEIFRWLLEEKMSPNAVTLASVLPACAGLATLNLGKELHAN 300

Query: 438 VKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEA 497
           +     +   +V +A++DMYAKCG +  A ++F  M  K  V WN +I+    +G   EA
Sbjct: 301 ILKHGLDERRHVGSAIMDMYAKCGRLDLAYQIFRRMPEKDAVCWNAIITNCSQNGKPQEA 360

Query: 498 LQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVD 557
           + LF +M   G+    V+  + L AC++   +  G  I   MI    F       + ++D
Sbjct: 361 IDLFRQMGREGLSYDCVSISAALSACANLPALHHGKAIHSFMIKG-AFDSEVFAESALID 419

Query: 558 ILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFE--LDPENV 615
           + G+ G L  A   +  +  E     W +++ A   H    ++     K+ E  + P++V
Sbjct: 420 MYGKCGNLSVA-RCVFDMMREKNEVSWNSIIAAYGSHGHLEVSLALFHKMLEDGIQPDHV 478

Query: 616 GYHVLLS 622
            +  +LS
Sbjct: 479 TFLTILS 485



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 130/471 (27%), Positives = 232/471 (49%), Gaps = 6/471 (1%)

Query: 26  TQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGF-SN 84
            Q H  +I  GF  D      L    S F     A  LF ++P  ++  +N +I GF  N
Sbjct: 93  NQLHGLVISCGFHFDPLVANALVAMYSKFGQLSDALKLFNTMPDTNVVTWNGMIAGFVQN 152

Query: 85  NEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLF 144
             M ++S+ F   +  +  ++PD+ T++  L + +       G  +HG+ +  G   D+F
Sbjct: 153 GFMDEASLLFSEMI--SAGVSPDSITFASFLPSVTESASLKQGKEIHGYILRHGIALDVF 210

Query: 145 VGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNG 204
           + +AL+D+YFK   V  A K+F +    D V+  ++ISG + N    D++ +F  ++   
Sbjct: 211 LKSALIDIYFKCRDVGMACKIFKQSTNVDIVVCTAIISGYVLNGLNNDALEIFRWLLEEK 270

Query: 205 GTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERA 264
            +  ++ ++A+VLPA A +  L LG E+    LK G  +  +V + ++  Y+KCG ++ A
Sbjct: 271 MS-PNAVTLASVLPACAGLATLNLGKELHANILKHGLDERRHVGSAIMDMYAKCGRLDLA 329

Query: 265 ELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPF 324
             +FR +   D +  NA+I+  + NGK + ++ LFRQ+       +  +I   +      
Sbjct: 330 YQIFRRMPEKDAVCWNAIITNCSQNGKPQEAIDLFRQMGREGLSYDCVSISAALSACANL 389

Query: 325 GHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMI 384
             LH    IHSF +K    S     +AL  +Y +   +  AR +FD   EK+  SWN++I
Sbjct: 390 PALHHGKAIHSFMIKGAFDSEVFAESALIDMYGKCGNLSVARCVFDMMREKNEVSWNSII 449

Query: 385 AGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLG-KWVHELVKSRNF 443
           A Y  +G  E +++LF +M    + P+ VT  +ILSAC   G +  G ++   + +    
Sbjct: 450 AAYGSHGHLEVSLALFHKMLEDGIQPDHVTFLTILSACGHAGQVDKGIQYFRCMTEEYGI 509

Query: 444 ESNIYVSTALIDMYAKCGNIVEARELFDLMS-HKSEVTWNTMISGYGLHGH 493
            + +     ++D++ + G + EA E    M     +  W T++    +HG+
Sbjct: 510 PARMEHYACIVDLFGRAGRLNEAFETIKNMPFSPDDGVWGTLLGACRVHGN 560



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 95/353 (26%), Positives = 182/353 (51%), Gaps = 2/353 (0%)

Query: 239 LGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRL 298
           +GF+   +V + L+  Y++ G +E A  LF  +   D +  N M++G+   G+  S++++
Sbjct: 1   MGFNVDEFVGSSLIKLYAENGCIEDARRLFDKMPNKDCVLWNVMLNGFVKCGEPNSAVKV 60

Query: 299 FRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSR 358
           F  +     + NS T   ++ +          N +H   +  G   +  V  AL  +YS+
Sbjct: 61  FEDMRNCQTKPNSITFASVLSICASEALSEFGNQLHGLVISCGFHFDPLVANALVAMYSK 120

Query: 359 LNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSI 418
             ++  A KLF+   + ++ +WN MIAG+ QNG  +EA  LF EM ++ V+P+ +T +S 
Sbjct: 121 FGQLSDALKLFNTMPDTNVVTWNGMIAGFVQNGFMDEASLLFSEMISAGVSPDSITFASF 180

Query: 419 LSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSE 478
           L +  +  ++  GK +H  +       ++++ +ALID+Y KC ++  A ++F   ++   
Sbjct: 181 LPSVTESASLKQGKEIHGYILRHGIALDVFLKSALIDIYFKCRDVGMACKIFKQSTNVDI 240

Query: 479 VTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQS 538
           V    +ISGY L+G   +AL++F  +L   + P+ VT  SVL AC+    +  G E+  +
Sbjct: 241 VVCTAIISGYVLNGLNNDALEIFRWLLEEKMSPNAVTLASVLPACAGLATLNLGKELHAN 300

Query: 539 MIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGAC 591
           ++  HG        + ++D+  + G+L+ A +  + +  E     W A++  C
Sbjct: 301 ILK-HGLDERRHVGSAIMDMYAKCGRLDLAYQIFRRMP-EKDAVCWNAIITNC 351


>gi|449491572|ref|XP_004158941.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g09950-like [Cucumis sativus]
          Length = 1004

 Score =  462 bits (1188), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 262/758 (34%), Positives = 400/758 (52%), Gaps = 10/758 (1%)

Query: 27  QTHAQIIIHGFQNDLSTVTKLAHRLSDFKATC----YARALFFSIPKPDLFLFNVIIRGF 82
           Q HAQ    G   DL   + L     D  A C     A  +F  +P+ +   +NV++ G+
Sbjct: 234 QMHAQAFKLGLLLDLFVGSALV----DLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGY 289

Query: 83  SNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSD 142
           +        +  +  + +   +  + FT + VL   +   +   G ++H   I  GY  +
Sbjct: 290 AQRGDVTGVLKLFCSMME-LDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGN 348

Query: 143 LFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVR 202
            F+G  LVD+Y K      A  VF  + + D V+W+++I+ L +    ++SI +F  ++R
Sbjct: 349 EFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLF-HLMR 407

Query: 203 NGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVE 262
            G T  +  ++ ++L A      L+ G  I     K GF   V V   LV+ Y K G V 
Sbjct: 408 LGDTLPNQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVH 467

Query: 263 RAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFY 322
               L+  +V  DLIS NA +SG    G  +  L +F  +L      N  T + ++    
Sbjct: 468 DGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCS 527

Query: 323 PFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNA 382
               +H    +H+  +K+ +  N+ V TAL  +Y++   +E A   F+  S + L +W  
Sbjct: 528 CLFDVHYGRQVHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDADVAFNRLSVRDLFTWTV 587

Query: 383 MIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRN 442
           +I  Y Q    E+A++ F++MQ   V PN  T++  LS C+ L ++  G+ +H +V    
Sbjct: 588 IITNYAQTNQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASLEGGQQLHSMVFKSG 647

Query: 443 FESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFS 502
             S+++V +AL+DMYAKCG + EA  LF+ +  +  + WNT+I GY  +G G +AL  F 
Sbjct: 648 HVSDMFVGSALVDMYAKCGCMEEAEALFEALIRRDTIAWNTIICGYAQNGQGNKALTAFR 707

Query: 503 EMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRA 562
            ML  GI P GVTF  +L ACSH GLV EG E F SM  D G  P  +H ACMVDILGR 
Sbjct: 708 MMLDEGISPDGVTFTGILSACSHQGLVEEGKEHFNSMYRDFGISPTVDHCACMVDILGRV 767

Query: 563 GQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLS 622
           G+ ++  +FI+ + +     +W  +LGA  +H +  L   A+ KLFEL PE    ++LLS
Sbjct: 768 GKFDELEDFIQKMQLSQNALIWETVLGASKMHNNLVLGEKAANKLFELQPEEESSYILLS 827

Query: 623 NIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLE 682
           NI++ E  +     VR ++  + + K PGC+ +E  G  H F S D  HPQ   I+  L+
Sbjct: 828 NIFATEGRWDDVKRVRSLMSSKGVKKEPGCSWVEANGQVHTFVSHDYSHPQIQEIHLKLD 887

Query: 683 KLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLR 742
           +L+ ++    +  +T   LH+V E EK+  ++ HSE+LA+ F LI+T    +IRI KNLR
Sbjct: 888 ELDRELASIQYVPKTEYVLHNVGETEKKENLRFHSERLALGFALISTSSEKKIRIFKNLR 947

Query: 743 VCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSC 780
           +C DCH   K IS +T + IVVRD  RFHHFK G CSC
Sbjct: 948 ICRDCHDVMKHISSITNQEIVVRDVRRFHHFKNGACSC 985



 Score =  241 bits (615), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 164/596 (27%), Positives = 278/596 (46%), Gaps = 6/596 (1%)

Query: 29  HAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNEMP 88
           H  I+      D      L +  +  + + YAR +   +P  D+  +  +I+G       
Sbjct: 135 HGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMPDRDVVSWTALIQGLVAEGFA 194

Query: 89  KSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAA 148
             SI  +  + +N  + P+ FT +  L A S C    +G  +H  A   G   DLFVG+A
Sbjct: 195 NDSIYLFQEM-QNEGIMPNEFTLATGLKACSLCMALDLGKQMHAQAFKLGLLLDLFVGSA 253

Query: 149 LVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWL 208
           LVDLY K   ++ A K+F  MPE++ V WN +++G  +       + +F  M+       
Sbjct: 254 LVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGDVTGVLKLFCSMME-LDVKC 312

Query: 209 DSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLF 268
           +  ++  VL   A  + L+ G  I  L +K G+  + ++  GLV  YSKCG    A  +F
Sbjct: 313 NEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCGLVDMYSKCGLAIDAIGVF 372

Query: 269 RDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLH 328
           + I +PD++  +A+I+     G++E S++LF  +       N  TI  L+      G+L 
Sbjct: 373 KTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPNQYTICSLLSAATNTGNLQ 432

Query: 329 LTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYT 388
               IH+   K G  ++ +V  AL T+Y +   +    KL++   ++ L SWNA ++G  
Sbjct: 433 YGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYESMVDRDLISWNAYLSGLH 492

Query: 389 QNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIY 448
             G+ +  +++F  M      PN  T  SIL +C+ L  +  G+ VH  +     + N +
Sbjct: 493 DCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVHYGRQVHAHIIKNQLDDNNF 552

Query: 449 VSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSG 508
           V TALIDMYAKC  + +A   F+ +S +   TW  +I+ Y     G +AL  F +M   G
Sbjct: 553 VCTALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQMQQEG 612

Query: 509 IRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKA 568
           ++P+  T    L  CS    + EG +   SM+   G        + +VD+  + G +E+A
Sbjct: 613 VKPNEFTLAGCLSGCSSLASL-EGGQQLHSMVFKSGHVSDMFVGSALVDMYAKCGCMEEA 671

Query: 569 LEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFE--LDPENVGYHVLLS 622
               + L +      W  ++     +   N A  A   + +  + P+ V +  +LS
Sbjct: 672 EALFEAL-IRRDTIAWNTIICGYAQNGQGNKALTAFRMMLDEGISPDGVTFTGILS 726



 Score =  198 bits (504), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 134/453 (29%), Positives = 223/453 (49%), Gaps = 16/453 (3%)

Query: 124 RSIGVL--LHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMI 181
           RS+GV   +HG  +      D  +  +LV++Y K  +   AR V  KMP++D V W ++I
Sbjct: 126 RSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMPDRDVVSWTALI 185

Query: 182 SGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGF 241
            GL+      DSI++F +M +N G   +  ++A  L A +    L LG ++     KLG 
Sbjct: 186 QGLVAEGFANDSIYLFQEM-QNEGIMPNEFTLATGLKACSLCMALDLGKQMHAQAFKLGL 244

Query: 242 HDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQ 301
              ++V + LV  Y+KCGE+E A  +F  +   + ++ N +++GY   G     L+LF  
Sbjct: 245 LLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGDVTGVLKLFCS 304

Query: 302 LLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNE 361
           ++    + N  T+  ++       +L     IHS  +K G   N  +   L  +YS+   
Sbjct: 305 MMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCGLVDMYSKCGL 364

Query: 362 MEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSA 421
              A  +F    +  +  W+A+I    Q G +EE+I LF  M+     PN  T+ S+LSA
Sbjct: 365 AIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPNQYTICSLLSA 424

Query: 422 CAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTW 481
               G +  G+ +H  V    FE+++ VS AL+ MY K G + +  +L++ M  +  ++W
Sbjct: 425 ATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYESMVDRDLISW 484

Query: 482 NTMISGYGLHGHGL--EALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDE----I 535
           N  +S  GLH  G+    L +F  ML  G  P+  TF+S+L +CS    V  G +    I
Sbjct: 485 NAYLS--GLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVHYGRQVHAHI 542

Query: 536 FQSMIHDHGFKPLAEHYACMVDILGRAGQLEKA 568
            ++ + D+ F   A     ++D+  +   LE A
Sbjct: 543 IKNQLDDNNFVCTA-----LIDMYAKCMYLEDA 570



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 48/179 (26%), Positives = 84/179 (46%), Gaps = 10/179 (5%)

Query: 416 SSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSH 475
           SS+L  CA   ++ + K +H L+       + ++  +L+++YAKC     AR +   M  
Sbjct: 116 SSMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMPD 175

Query: 476 KSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEI 535
           +  V+W  +I G    G   +++ LF EM + GI P+  T  + L ACS    +  G + 
Sbjct: 176 RDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQ- 234

Query: 536 FQSMIHDHGFK--PLAEHY--ACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGA 590
               +H   FK   L + +  + +VD+  + G++E A +   G+  E     W  LL  
Sbjct: 235 ----MHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMP-EQNDVTWNVLLNG 288


>gi|302762388|ref|XP_002964616.1| hypothetical protein SELMODRAFT_82072 [Selaginella moellendorffii]
 gi|300168345|gb|EFJ34949.1| hypothetical protein SELMODRAFT_82072 [Selaginella moellendorffii]
          Length = 795

 Score =  462 bits (1188), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 257/736 (34%), Positives = 413/736 (56%), Gaps = 28/736 (3%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           ARA F +I + + + +  ++  ++ N   ++++  Y    K   L P+   Y+ VL A +
Sbjct: 77  ARAAFDAIARKNDYSWGSMLTAYAQNGHYRAALDLY----KRMDLQPNPVVYTTVLGACA 132

Query: 120 ACCDRSIGVLLHGHAIVS------GYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKD 173
                SI  L  G AI S      G   D+ +  +L+ +Y K   ++ A+++F++M  + 
Sbjct: 133 -----SIKALEEGKAIHSRISGTKGLKLDVILENSLLTMYAKCGSLEDAKRLFERMSGRS 187

Query: 174 TVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQ 233
              WN+MI+   ++  F+++I ++ DM           +  +VL A + +  L  G +I 
Sbjct: 188 VSSWNAMIAAYAQSGHFEEAIRLYEDMDVEPSV----RTFTSVLSACSNLGLLDQGRKIH 243

Query: 234 CLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTE 293
            L    G    + +   L++ Y++C  ++ A  +F+ + R D++S +AMI+ +      +
Sbjct: 244 ALISSRGTELDLSLQNALLTMYARCKCLDDAAKIFQRLPRRDVVSWSAMIAAFAETDLFD 303

Query: 294 SSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSG---IVSNSSVLT 350
            ++  + ++     R N  T   ++      G L     +H   L +G    + N + L 
Sbjct: 304 EAIEFYSKMQLEGVRPNYYTFASVLLACASVGDLRAGRAVHDQILGNGYKITLVNGTALV 363

Query: 351 ALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQ-ASKVA 409
            L T Y  L+E   AR LFD+   +    W  +I GY++ G     + L++EM+  +KV 
Sbjct: 364 DLYTSYGSLDE---ARSLFDQIENRDEGLWTVLIGGYSKQGHRTGVLELYREMKNTTKVP 420

Query: 410 PNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEAREL 469
              +  S ++SACA LGA +  +  H  +++    S+  ++T+L++MY++ GN+  AR++
Sbjct: 421 ATKIIYSCVISACASLGAFADARQAHSDIEADGMISDFVLATSLVNMYSRWGNLESARQV 480

Query: 470 FDLMSHKSEVTWNTMISGYGLHG-HGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGL 528
           FD MS +  + W T+I+GY  HG HGL AL L+ EM   G  PS +TF+ VLYACSHAGL
Sbjct: 481 FDKMSSRDTLAWTTLIAGYAKHGEHGL-ALGLYKEMELEGAEPSELTFMVVLYACSHAGL 539

Query: 529 VREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALL 588
             +G ++F S+  D+   P   HY+C++D+L RAG+L  A E I  + VEP    W +LL
Sbjct: 540 QEQGKQLFISIQSDYAMHPNIAHYSCIIDLLSRAGRLSDAEELINAMPVEPNDVTWSSLL 599

Query: 589 GACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAK 648
           GA  IHKD   A  A+ ++ +LDP +   +VLLSN+++   +    A+VR  +  R + K
Sbjct: 600 GASRIHKDVKRATHAAGQITKLDPVDPASYVLLSNVHAVTGNLAGMASVRNTMVARGVKK 659

Query: 649 APGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEE 708
             G + IEV    H F  GD  HP+   I+A L++L+ K++EAG+  E+   LHDV E+E
Sbjct: 660 RRGSSWIEVADQIHEFNVGDNSHPRFQEIFAELQRLSPKIKEAGYVPESEEVLHDVGEKE 719

Query: 709 KELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDAN 768
           KEL++++HSEKLAIAFGLIAT PGT +RI   LR+C DCH+A KFIS +  R I+VRD++
Sbjct: 720 KELLLRLHSEKLAIAFGLIATAPGTTLRIFNTLRICHDCHSAVKFISAIARREIIVRDSS 779

Query: 769 RFHHFKGGVCSCGDYW 784
           RFH F+ G CSCGDYW
Sbjct: 780 RFHKFRDGQCSCGDYW 795



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 135/475 (28%), Positives = 224/475 (47%), Gaps = 20/475 (4%)

Query: 133 HAIVSGYGS-DLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQ 191
           H  +SG  S ++F+G  +V  Y K   V SAR  FD +  K+   W SM++   +N  ++
Sbjct: 47  HDRISGAASANVFLGNEIVRAYGKCGSVASARAAFDAIARKNDYSWGSMLTAYAQNGHYR 106

Query: 192 DSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCL-----GLKLGFHDHVY 246
            ++    D+ +      +      VL A A ++ L  G  I        GLKL     V 
Sbjct: 107 AAL----DLYKRMDLQPNPVVYTTVLGACASIKALEEGKAIHSRISGTKGLKL----DVI 158

Query: 247 VLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASA 306
           +   L++ Y+KCG +E A+ LF  +    + S NAMI+ Y  +G  E ++RL+  +    
Sbjct: 159 LENSLLTMYAKCGSLEDAKRLFERMSGRSVSSWNAMIAAYAQSGHFEEAIRLYEDMDVEP 218

Query: 307 ERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAAR 366
              +  T   ++      G L     IH+     G   + S+  AL T+Y+R   ++ A 
Sbjct: 219 ---SVRTFTSVLSACSNLGLLDQGRKIHALISSRGTELDLSLQNALLTMYARCKCLDDAA 275

Query: 367 KLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLG 426
           K+F     + + SW+AMIA + +  L +EAI  + +MQ   V PN  T +S+L ACA +G
Sbjct: 276 KIFQRLPRRDVVSWSAMIAAFAETDLFDEAIEFYSKMQLEGVRPNYYTFASVLLACASVG 335

Query: 427 AISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMIS 486
            +  G+ VH+ +    ++  +   TAL+D+Y   G++ EAR LFD + ++ E  W  +I 
Sbjct: 336 DLRAGRAVHDQILGNGYKITLVNGTALVDLYTSYGSLDEARSLFDQIENRDEGLWTVLIG 395

Query: 487 GYGLHGHGLEALQLFSEMLHSGIRP-SGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGF 545
           GY   GH    L+L+ EM ++   P + + +  V+ AC+  G   +  +   S I   G 
Sbjct: 396 GYSKQGHRTGVLELYREMKNTTKVPATKIIYSCVISACASLGAFADARQA-HSDIEADGM 454

Query: 546 KPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLA 600
                    +V++  R G LE A +    ++     A W  L+     H +  LA
Sbjct: 455 ISDFVLATSLVNMYSRWGNLESARQVFDKMSSRDTLA-WTTLIAGYAKHGEHGLA 508



 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 106/436 (24%), Positives = 181/436 (41%), Gaps = 65/436 (14%)

Query: 3   MKTPQSRNLFLSLLKGAKTQSQLTQ---THAQIIIHGFQNDLSTVTKLAHRLSDFKATCY 59
           M    S   F S+L        L Q    HA I   G + DLS    L    +  K    
Sbjct: 214 MDVEPSVRTFTSVLSACSNLGLLDQGRKIHALISSRGTELDLSLQNALLTMYARCKCLDD 273

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           A  +F  +P+ D+  ++ +I  F+  ++   +I FY+ ++    + P+ +T++ VL A +
Sbjct: 274 AAKIFQRLPRRDVVSWSAMIAAFAETDLFDEAIEFYSKMQLE-GVRPNYYTFASVLLACA 332

Query: 120 ACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNS 179
           +  D   G  +H   + +GY   L  G ALVDLY  +  +  AR +FD++  +D  LW  
Sbjct: 333 SVGDLRAGRAVHDQILGNGYKITLVNGTALVDLYTSYGSLDEARSLFDQIENRDEGLWTV 392

Query: 180 MISGLMKNCCFQDSIWVFGDMVRNGGTWLDST--------SVAAVLPAVAEVQELRLGME 231
           +I G  K       + ++ +M     T + +T        S  A L A A+ ++    +E
Sbjct: 393 LIGGYSKQGHRTGVLELYREM--KNTTKVPATKIIYSCVISACASLGAFADARQAHSDIE 450

Query: 232 IQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGK 291
                   G      + T LV+ YS+ G +E A  +F  +   D ++   +I+GY  +G+
Sbjct: 451 AD------GMISDFVLATSLVNMYSRWGNLESARQVFDKMSSRDTLAWTTLIAGYAKHGE 504

Query: 292 TESSLRLFRQL-LASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLT 350
              +L L++++ L  AE    + +V    V Y   H  L                     
Sbjct: 505 HGLALGLYKEMELEGAEPSELTFMV----VLYACSHAGL--------------------- 539

Query: 351 ALSTVYSRLNEMEAARKLF-----DESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQA 405
                       E  ++LF     D +   ++A ++ +I   ++ G   +A  L   M  
Sbjct: 540 -----------QEQGKQLFISIQSDYAMHPNIAHYSCIIDLLSRAGRLSDAEELINAM-- 586

Query: 406 SKVAPNPVTVSSILSA 421
             V PN VT SS+L A
Sbjct: 587 -PVEPNDVTWSSLLGA 601



 Score = 72.4 bits (176), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 48/204 (23%), Positives = 90/204 (44%), Gaps = 38/204 (18%)

Query: 419 LSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSE 478
           L  C  L ++   + +H+ + S    +N+++   ++  Y KCG++  AR  FD ++ K++
Sbjct: 34  LRQCQDLESV---RQIHDRI-SGAASANVFLGNEIVRAYGKCGSVASARAAFDAIARKND 89

Query: 479 VTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQS 538
            +W +M++ Y  +GH   AL L+  M    ++P+ V + +VL AC+    + EG  I   
Sbjct: 90  YSWGSMLTAYAQNGHYRAALDLYKRM---DLQPNPVVYTTVLGACASIKALEEGKAIHSR 146

Query: 539 MIHDHGFK-------PLAEHYA------------------------CMVDILGRAGQLEK 567
           +    G K        L   YA                         M+    ++G  E+
Sbjct: 147 ISGTKGLKLDVILENSLLTMYAKCGSLEDAKRLFERMSGRSVSSWNAMIAAYAQSGHFEE 206

Query: 568 ALEFIKGLAVEPGPAVWGALLGAC 591
           A+   + + VEP    + ++L AC
Sbjct: 207 AIRLYEDMDVEPSVRTFTSVLSAC 230


>gi|449443492|ref|XP_004139511.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
           mitochondrial-like [Cucumis sativus]
          Length = 678

 Score =  462 bits (1188), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 233/586 (39%), Positives = 359/586 (61%), Gaps = 1/586 (0%)

Query: 199 DMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKC 258
           D++  G    + T  + +L     +++L+ G  I        F D + +L  +++ Y+KC
Sbjct: 94  DLINCGSLEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKC 153

Query: 259 GEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLI 318
           G +E A+ LF  +   D++S   +ISGY+ +G+   +L LF ++L    + N  T+  L+
Sbjct: 154 GSLEEAQDLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLL 213

Query: 319 PVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLA 378
                    H    +H+F LK G   N  V ++L  +Y+R   M  A+ +F+  + K++ 
Sbjct: 214 KASGTGPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVV 273

Query: 379 SWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELV 438
           SWNA+IAG+ + G  E  + LF +M      P   T SS+ +ACA  G++  GKWVH  V
Sbjct: 274 SWNALIAGHARKGEGEHVMRLFLQMLRQGFEPTHFTYSSVFTACASSGSLEQGKWVHAHV 333

Query: 439 KSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEAL 498
                +   Y+   LIDMYAK G+I +A+++F  +  +  V+WN++ISGY  HG G EAL
Sbjct: 334 IKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEAL 393

Query: 499 QLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDI 558
           QLF +ML + ++P+ +TFLSVL ACSH+GL+ EG   F+ ++  H  +    H+  +VD+
Sbjct: 394 QLFEQMLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFE-LMKKHKIEAQVAHHVTVVDL 452

Query: 559 LGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYH 618
           LGRAG+L +A +FI+ + ++P  AVWGALLG+C +HK+ +L   A+E++FELDP + G H
Sbjct: 453 LGRAGRLNEANKFIEEMPIKPTAAVWGALLGSCRMHKNMDLGVYAAEQIFELDPHDSGPH 512

Query: 619 VLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIY 678
           VLLSNIY++      AA VR+++K+  + K P C+ +E+    HVF + D  HP    I 
Sbjct: 513 VLLSNIYASAGRLSDAAKVRKMMKESGVKKEPACSWVEIENEVHVFVANDDSHPMREEIQ 572

Query: 679 AMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRII 738
            M EK++GK++E G+  +T   L  + ++++EL ++ HSEKLA+AF ++ T PG  IRI 
Sbjct: 573 RMWEKISGKIKEIGYVPDTSHVLFFMNQQDRELKLQYHSEKLALAFAVLKTPPGLTIRIK 632

Query: 739 KNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           KN+R+C DCH+A KF S+V GR I+VRD NRFHHF  G+CSC DYW
Sbjct: 633 KNIRICGDCHSAFKFASRVLGREIIVRDTNRFHHFLHGMCSCRDYW 678



 Score =  175 bits (444), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 102/390 (26%), Positives = 201/390 (51%), Gaps = 2/390 (0%)

Query: 103 ALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSA 162
           +L P+   YS +L+  +       G  +H H   S +  DL +   ++++Y K   ++ A
Sbjct: 100 SLEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEA 159

Query: 163 RKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAE 222
           + +FDKMP KD V W  +ISG  ++    +++ +F  M+ + G   +  +++++L A   
Sbjct: 160 QDLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKML-HLGFQPNEFTLSSLLKASGT 218

Query: 223 VQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAM 282
                 G ++    LK G+  +V+V + L+  Y++   +  A+++F  +   +++S NA+
Sbjct: 219 GPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNAL 278

Query: 283 ISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGI 342
           I+G+   G+ E  +RLF Q+L         T   +       G L     +H+  +KSG 
Sbjct: 279 IAGHARKGEGEHVMRLFLQMLRQGFEPTHFTYSSVFTACASSGSLEQGKWVHAHVIKSGG 338

Query: 343 VSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQE 402
              + +   L  +Y++   ++ A+K+F    ++ + SWN++I+GY Q+GL  EA+ LF++
Sbjct: 339 QPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQ 398

Query: 403 MQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGN 462
           M  +KV PN +T  S+L+AC+  G +  G++  EL+K    E+ +     ++D+  + G 
Sbjct: 399 MLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFELMKKHKIEAQVAHHVTVVDLLGRAGR 458

Query: 463 IVEARELFDLMSHK-SEVTWNTMISGYGLH 491
           + EA +  + M  K +   W  ++    +H
Sbjct: 459 LNEANKFIEEMPIKPTAAVWGALLGSCRMH 488



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 111/473 (23%), Positives = 212/473 (44%), Gaps = 50/473 (10%)

Query: 9   RNLFLSLLKGAKTQSQLTQ---THAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFF 65
           R L+  +L       +L Q    HA I    F++DL  +  + +  +   +   A+ LF 
Sbjct: 105 RTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQDLFD 164

Query: 66  SIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRS 125
            +P  D+  + V+I G+S +     ++  +  +  +    P+ FT S +L A+       
Sbjct: 165 KMPTKDMVSWTVLISGYSQSGQASEALALFPKML-HLGFQPNEFTLSSLLKASGTGPSDH 223

Query: 126 IGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLM 185
            G  LH  ++  GY  ++ VG++L+D+Y +++ ++ A+ +F+ +  K+ V WN++I+G  
Sbjct: 224 HGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGHA 283

Query: 186 KNCCFQDSIWVFGDMVRNGGTWLDST--SVAAVLPAVAEVQELRLGMEIQCLGLKLGFHD 243
           +    +  + +F  M+R G    + T  + ++V  A A    L  G  +    +K G   
Sbjct: 284 RKGEGEHVMRLFLQMLRQG---FEPTHFTYSSVFTACASSGSLEQGKWVHAHVIKSGGQP 340

Query: 244 HVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLL 303
             Y+   L+  Y+K G ++ A+ +FR +V+ D++S N++ISGY  +G    +L+LF Q+L
Sbjct: 341 IAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQML 400

Query: 304 ASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEME 363
            +  + N  T + +           LT C HS  L  G                   E+ 
Sbjct: 401 KAKVQPNEITFLSV-----------LTACSHSGLLDEG---------------QYYFELM 434

Query: 364 AARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACA 423
              K+     E  +A    ++    + G   EA    +EM    + P      ++L +C 
Sbjct: 435 KKHKI-----EAQVAHHVTVVDLLGRAGRLNEANKFIEEM---PIKPTAAVWGALLGSCR 486

Query: 424 QLGAISLGKWVHELVKSRNFESNIYVS---TALIDMYAKCGNIVEARELFDLM 473
               + LG +  E +    FE + + S     L ++YA  G + +A ++  +M
Sbjct: 487 MHKNMDLGVYAAEQI----FELDPHDSGPHVLLSNIYASAGRLSDAAKVRKMM 535


>gi|15235537|ref|NP_195454.1| Tetratricopeptide repeat (TPR)-like superfamily protein
           [Arabidopsis thaliana]
 gi|75213666|sp|Q9SZT8.1|PP354_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g37380, chloroplastic; Flags: Precursor
 gi|4468804|emb|CAB38205.1| putative protein [Arabidopsis thaliana]
 gi|7270720|emb|CAB80403.1| putative protein [Arabidopsis thaliana]
 gi|332661386|gb|AEE86786.1| Tetratricopeptide repeat (TPR)-like superfamily protein
           [Arabidopsis thaliana]
          Length = 632

 Score =  461 bits (1187), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 236/559 (42%), Positives = 341/559 (61%), Gaps = 29/559 (5%)

Query: 255 YSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTI 314
           Y+  G++  +  LF   + PDL    A I+  + NG  + +  L+ QLL+S    N  T 
Sbjct: 74  YASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTF 133

Query: 315 VGLIPVFY----PFGHLHL------------TNCIHSFCLKSGIVSNSSVL--------- 349
             L+           H H+            T  +  +     +VS   V          
Sbjct: 134 SSLLKSCSTKSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLV 193

Query: 350 --TALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQAS- 406
             TA+ T Y++   +EAAR LFD   E+ + SWN MI GY Q+G   +A+ LFQ++ A  
Sbjct: 194 SSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEG 253

Query: 407 KVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEA 466
           K  P+ +TV + LSAC+Q+GA+  G+W+H  VKS     N+ V T LIDMY+KCG++ EA
Sbjct: 254 KPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEA 313

Query: 467 RELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLH-SGIRPSGVTFLSVLYACSH 525
             +F+    K  V WN MI+GY +HG+  +AL+LF+EM   +G++P+ +TF+  L AC+H
Sbjct: 314 VLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAH 373

Query: 526 AGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWG 585
           AGLV EG  IF+SM  ++G KP  EHY C+V +LGRAGQL++A E IK + ++    +W 
Sbjct: 374 AGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWS 433

Query: 586 ALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRK 645
           ++LG+C +H D  L +  +E L  L+ +N G +VLLSNIY++  DY   A VR ++K++ 
Sbjct: 434 SVLGSCKLHGDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVRNLMKEKG 493

Query: 646 LAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVE 705
           + K PG + IE+    H F +GD+ H +S  IY ML K++ +++  G+   T T L D+E
Sbjct: 494 IVKEPGISTIEIENKVHEFRAGDREHSKSKEIYTMLRKISERIKSHGYVPNTNTVLQDLE 553

Query: 706 EEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVR 765
           E EKE  ++VHSE+LAIA+GLI+T+PG+ ++I KNLRVC DCHT TK ISK+TGR IV+R
Sbjct: 554 ETEKEQSLQVHSERLAIAYGLISTKPGSPLKIFKNLRVCSDCHTVTKLISKITGRKIVMR 613

Query: 766 DANRFHHFKGGVCSCGDYW 784
           D NRFHHF  G CSCGD+W
Sbjct: 614 DRNRFHHFTDGSCSCGDFW 632



 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 135/500 (27%), Positives = 214/500 (42%), Gaps = 74/500 (14%)

Query: 15  LLKGAKTQSQLTQTHAQIIIHGF--QNDLSTVTKLAHR-LSDFKATCYARALFFSIPKPD 71
           L+  +++  ++ Q HA I+ H          +    HR  +      ++ ALF     PD
Sbjct: 35  LIDKSQSVDEVLQIHAAILRHNLLLHPRYPVLNLKLHRAYASHGKIRHSLALFHQTIDPD 94

Query: 72  LFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLH 131
           LFLF   I   S N +   +   Y  L  ++ + P+ FT+S +L +    C    G L+H
Sbjct: 95  LFLFTAAINTASINGLKDQAFLLYVQLL-SSEINPNEFTFSSLLKS----CSTKSGKLIH 149

Query: 132 GHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMP--------------------- 170
            H +  G G D +V   LVD+Y K   V SA+KVFD+MP                     
Sbjct: 150 THVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVE 209

Query: 171 ----------EKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAV 220
                     E+D V WN MI G  ++    D++ +F  ++  G    D  +V A L A 
Sbjct: 210 AARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSAC 269

Query: 221 AEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCN 280
           +++  L  G  I           +V V TGL+  YSKCG +E A L+F D  R D+++ N
Sbjct: 270 SQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWN 329

Query: 281 AMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKS 340
           AMI+GY  +G ++ +LRLF ++           I GL P    F    L  C H+  +  
Sbjct: 330 AMIAGYAMHGYSQDALRLFNEM---------QGITGLQPTDITFIGT-LQACAHAGLVNE 379

Query: 341 GIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLF 400
           GI     +  ++   Y    ++E                +  +++   + G  + A    
Sbjct: 380 GI----RIFESMGQEYGIKPKIE---------------HYGCLVSLLGRAGQLKRAYETI 420

Query: 401 QEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFE-SNIYVSTALIDMYAK 459
           + M    +  + V  SS+L +C   G   LGK + E +   N + S IYV   L ++YA 
Sbjct: 421 KNMN---MDADSVLWSSVLGSCKLHGDFVLGKEIAEYLIGLNIKNSGIYV--LLSNIYAS 475

Query: 460 CGNIVEARELFDLMSHKSEV 479
            G+     ++ +LM  K  V
Sbjct: 476 VGDYEGVAKVRNLMKEKGIV 495



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 78/286 (27%), Positives = 125/286 (43%), Gaps = 35/286 (12%)

Query: 12  FLSLLKGAKTQS-QLTQTH--------------AQIIIHGFQNDLSTVTKLAHRL----- 51
           F SLLK   T+S +L  TH                + ++    D+ +  K+  R+     
Sbjct: 133 FSSLLKSCSTKSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSL 192

Query: 52  --SDFKATCYA--------RALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKN 101
             S    TCYA        RALF S+ + D+  +NV+I G++ +  P  ++  +  L   
Sbjct: 193 VSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAE 252

Query: 102 TALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKS 161
               PD  T    LSA S       G  +H     S    ++ V   L+D+Y K   ++ 
Sbjct: 253 GKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEE 312

Query: 162 ARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAV--LPA 219
           A  VF+  P KD V WN+MI+G   +   QD++ +F +M   G T L  T +  +  L A
Sbjct: 313 AVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEM--QGITGLQPTDITFIGTLQA 370

Query: 220 VAEVQELRLGMEI-QCLGLKLGFHDHVYVLTGLVSFYSKCGEVERA 264
            A    +  G+ I + +G + G    +     LVS   + G+++RA
Sbjct: 371 CAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRA 416


>gi|15231970|ref|NP_187494.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207322|sp|Q9SR82.1|PP219_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g08820
 gi|6403507|gb|AAF07847.1|AC010871_23 unknown protein [Arabidopsis thaliana]
 gi|12322725|gb|AAG51349.1|AC012562_10 unknown protein; 90102-88045 [Arabidopsis thaliana]
 gi|332641162|gb|AEE74683.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 685

 Score =  461 bits (1187), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 249/643 (38%), Positives = 358/643 (55%), Gaps = 1/643 (0%)

Query: 142 DLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMV 201
           D F+   L+     F   K +  +F      +  L+NS+I+G + N  F +++ +F   +
Sbjct: 44  DTFLVNLLLKRTLFFRQTKYSYLLFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLS-I 102

Query: 202 RNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEV 261
           R  G +L   +   VL A       +LG+++  L +K GF+  V  +T L+S YS  G +
Sbjct: 103 RKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRL 162

Query: 262 ERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVF 321
             A  LF +I    +++  A+ SGYT +G+   ++ LF++++    + +S  IV ++   
Sbjct: 163 NDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSAC 222

Query: 322 YPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWN 381
              G L     I  +  +  +  NS V T L  +Y++  +ME AR +FD   EK + +W+
Sbjct: 223 VHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWS 282

Query: 382 AMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSR 441
            MI GY  N   +E I LF +M    + P+  ++   LS+CA LGA+ LG+W   L+   
Sbjct: 283 TMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRH 342

Query: 442 NFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLF 501
            F +N++++ ALIDMYAKCG +    E+F  M  K  V  N  ISG   +GH   +  +F
Sbjct: 343 EFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVF 402

Query: 502 SEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGR 561
            +    GI P G TFL +L  C HAGL+++G   F ++   +  K   EHY CMVD+ GR
Sbjct: 403 GQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGR 462

Query: 562 AGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLL 621
           AG L+ A   I  + + P   VWGALL  C + KDT LA    ++L  L+P N G +V L
Sbjct: 463 AGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQL 522

Query: 622 SNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAML 681
           SNIYS    + +AA VR ++ K+ + K PG + IE+ G  H F + D+ HP S  IYA L
Sbjct: 523 SNIYSVGGRWDEAAEVRDMMNKKGMKKIPGYSWIELEGKVHEFLADDKSHPLSDKIYAKL 582

Query: 682 EKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNL 741
           E L  +MR  GF   T     DVEEEEKE ++  HSEKLA+A GLI+T+ G  IR++KNL
Sbjct: 583 EDLGNEMRLMGFVPTTEFVFFDVEEEEKERVLGYHSEKLAVALGLISTDHGQVIRVVKNL 642

Query: 742 RVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           RVC DCH   K ISK+T R IVVRD NRFH F  G CSC DYW
Sbjct: 643 RVCGDCHEVMKLISKITRREIVVRDNNRFHCFTNGSCSCNDYW 685



 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 125/476 (26%), Positives = 229/476 (48%), Gaps = 4/476 (0%)

Query: 14  SLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLF 73
           +L+  A T + L Q H  +I H   +D   V  L  R   F+ T Y+  LF     P++F
Sbjct: 18  TLISVACTVNHLKQIHVSLINHHLHHDTFLVNLLLKRTLFFRQTKYSYLLFSHTQFPNIF 77

Query: 74  LFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGH 133
           L+N +I GF NN +   ++  +  +RK+  L    FT+  VL A +    R +G+ LH  
Sbjct: 78  LYNSLINGFVNNHLFHETLDLFLSIRKH-GLYLHGFTFPLVLKACTRASSRKLGIDLHSL 136

Query: 134 AIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDS 193
            +  G+  D+    +L+ +Y     +  A K+FD++P++  V W ++ SG   +   +++
Sbjct: 137 VVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREA 196

Query: 194 IWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVS 253
           I +F  MV   G   DS  +  VL A   V +L  G  I     ++    + +V T LV+
Sbjct: 197 IDLFKKMVEM-GVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVN 255

Query: 254 FYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSST 313
            Y+KCG++E+A  +F  +V  D+++ + MI GY  N   +  + LF Q+L    + +  +
Sbjct: 256 LYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFS 315

Query: 314 IVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESS 373
           IVG +      G L L     S   +   ++N  +  AL  +Y++   M    ++F E  
Sbjct: 316 IVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMK 375

Query: 374 EKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLG-K 432
           EK +   NA I+G  +NG  + + ++F + +   ++P+  T   +L  C   G I  G +
Sbjct: 376 EKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLR 435

Query: 433 WVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELF-DLMSHKSEVTWNTMISG 487
           + + +      +  +     ++D++ + G + +A  L  D+    + + W  ++SG
Sbjct: 436 FFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSG 491


>gi|356574473|ref|XP_003555371.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g63370-like [Glycine max]
          Length = 923

 Score =  461 bits (1187), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 250/730 (34%), Positives = 402/730 (55%), Gaps = 10/730 (1%)

Query: 60  ARALFFSI--PKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSA 117
           AR LF  I   K D   +N II           ++  +  +++   +  + +T+   L  
Sbjct: 199 ARVLFDGIMMEKEDTVSWNSIISAHVTEGKCLEALSLFRRMQE-VGVASNTYTFVAALQG 257

Query: 118 ASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLW 177
                   +G+ +HG A+ S + +D++V  AL+ +Y K   ++ A +VF  M  +D V W
Sbjct: 258 VEDPSFVKLGMGIHGAALKSNHFADVYVANALIAMYAKCGRMEDAERVFASMLCRDYVSW 317

Query: 178 NSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGL 237
           N+++SGL++N  ++D++  F DM +N     D  SV  ++ A      L  G E+    +
Sbjct: 318 NTLLSGLVQNELYRDALNYFRDM-QNSAQKPDQVSVLNLIAASGRSGNLLNGKEVHAYAI 376

Query: 238 KLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLR 297
           + G   ++ +   L+  Y+KC  V+     F  +   DLIS   +I+GY  N     ++ 
Sbjct: 377 RNGLDSNMQIGNTLIDMYAKCCCVKHMGYAFECMHEKDLISWTTIIAGYAQNECHLEAIN 436

Query: 298 LFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYS 357
           LFR++      V+   I  ++         +    IH +  K  + ++  +  A+  VY 
Sbjct: 437 LFRKVQVKGMDVDPMMIGSVLRACSGLKSRNFIREIHGYVFKRDL-ADIMLQNAIVNVYG 495

Query: 358 RLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSS 417
            +   + AR+ F+    K + SW +MI     NGL  EA+ LF  ++ + + P+ + + S
Sbjct: 496 EVGHRDYARRAFESIRSKDIVSWTSMITCCVHNGLPVEALELFYSLKQTNIQPDSIAIIS 555

Query: 418 ILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKS 477
            LSA A L ++  GK +H  +  + F     ++++L+DMYA CG +  +R++F  +  + 
Sbjct: 556 ALSATANLSSLKKGKEIHGFLIRKGFFLEGPIASSLVDMYACCGTVENSRKMFHSVKQRD 615

Query: 478 EVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQ 537
            + W +MI+  G+HG G EA+ LF +M    + P  +TFL++LYACSH+GL+ EG   F+
Sbjct: 616 LILWTSMINANGMHGCGNEAIALFKKMTDENVIPDHITFLALLYACSHSGLMVEGKRFFE 675

Query: 538 SMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDT 597
            M + +  +P  EHYACMVD+L R+  LE+A +F++ + ++P   VW ALLGAC IH + 
Sbjct: 676 IMKYGYQLEPWPEHYACMVDLLSRSNSLEEAYQFVRSMPIKPSSEVWCALLGACHIHSNK 735

Query: 598 NLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEV 657
            L  +A+++L + D +N G + L+SNI++A+  +     VR  +K   L K PGC+ IEV
Sbjct: 736 ELGELAAKELLQSDTKNSGKYALISNIFAADGRWNDVEEVRLRMKGNGLKKNPGCSWIEV 795

Query: 658 GGTPHVFTSGDQLHPQSTAIY---AMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMK 714
               H F + D+ HPQ+  IY   A   KL GK  + G+  +T    H+V EEEK  M+ 
Sbjct: 796 DNKIHTFMARDKSHPQTDDIYLKLAQFTKLLGK--KGGYIAQTKFVFHNVSEEEKTQMLY 853

Query: 715 VHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFK 774
            HSE+LA+ +GL+ T  GT IRI KNLR+C DCHT  K  S+V+ R +VVRDANRFHHF+
Sbjct: 854 RHSERLALGYGLLVTPKGTSIRITKNLRICDDCHTFFKIASEVSQRALVVRDANRFHHFE 913

Query: 775 GGVCSCGDYW 784
            G+CSCGD+W
Sbjct: 914 RGLCSCGDFW 923



 Score =  205 bits (522), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 145/480 (30%), Positives = 241/480 (50%), Gaps = 21/480 (4%)

Query: 144 FVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRN 203
           F+   L+ +Y K   +K A KVFD+M E+    WN+M+   + +  + ++I ++ +M R 
Sbjct: 80  FLATKLLHMYEKCGSLKDAVKVFDEMTERTIFTWNAMMGAFVSSGKYLEAIELYKEM-RV 138

Query: 204 GGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVER 263
            G  +D+ +  +VL A   + E RLG EI  + +K GF + V+V   L++ Y KCG++  
Sbjct: 139 LGVAIDACTFPSVLKACGALGESRLGAEIHGVAVKCGFGEFVFVCNALIAMYGKCGDLGG 198

Query: 264 AELLFRDIV--RPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVF 321
           A +LF  I+  + D +S N++IS +   GK   +L LFR++       N+ T V  +   
Sbjct: 199 ARVLFDGIMMEKEDTVSWNSIISAHVTEGKCLEALSLFRRMQEVGVASNTYTFVAALQGV 258

Query: 322 YPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWN 381
                + L   IH   LKS   ++  V  AL  +Y++   ME A ++F     +   SWN
Sbjct: 259 EDPSFVKLGMGIHGAALKSNHFADVYVANALIAMYAKCGRMEDAERVFASMLCRDYVSWN 318

Query: 382 AMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSR 441
            +++G  QN L  +A++ F++MQ S   P+ V+V ++++A  + G +  GK VH      
Sbjct: 319 TLLSGLVQNELYRDALNYFRDMQNSAQKPDQVSVLNLIAASGRSGNLLNGKEVHAYAIRN 378

Query: 442 NFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLF 501
             +SN+ +   LIDMYAKC  +      F+ M  K  ++W T+I+GY  +   LEA+ LF
Sbjct: 379 GLDSNMQIGNTLIDMYAKCCCVKHMGYAFECMHEKDLISWTTIIAGYAQNECHLEAINLF 438

Query: 502 SEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFK-PLAE--HYACMVDI 558
            ++   G+    +   SVL ACS  GL       F   IH + FK  LA+      +V++
Sbjct: 439 RKVQVKGMDVDPMMIGSVLRACS--GLKSRN---FIREIHGYVFKRDLADIMLQNAIVNV 493

Query: 559 LGRAGQLE---KALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENV 615
            G  G  +   +A E I+   +      W +++  C +H    L   A E  + L   N+
Sbjct: 494 YGEVGHRDYARRAFESIRSKDI----VSWTSMI-TCCVH--NGLPVEALELFYSLKQTNI 546



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 123/459 (26%), Positives = 205/459 (44%), Gaps = 43/459 (9%)

Query: 216 VLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPD 275
           +L     V+ L  G ++    LK   H   ++ T L+  Y KCG ++ A  +F ++    
Sbjct: 52  LLDLCVAVKALPQGQQLHARLLK--SHLSAFLATKLLHMYEKCGSLKDAVKVFDEMTERT 109

Query: 276 LISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHS 335
           + + NAM+  +  +GK   ++ L++++      +++ T   ++      G   L   IH 
Sbjct: 110 IFTWNAMMGAFVSSGKYLEAIELYKEMRVLGVAIDACTFPSVLKACGALGESRLGAEIHG 169

Query: 336 FCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDE--SSEKSLASWNAMIAGYTQNGLT 393
             +K G      V  AL  +Y +  ++  AR LFD     ++   SWN++I+ +   G  
Sbjct: 170 VAVKCGFGEFVFVCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHVTEGKC 229

Query: 394 EEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTAL 453
            EA+SLF+ MQ   VA N  T  + L        + LG  +H      N  +++YV+ AL
Sbjct: 230 LEALSLFRRMQEVGVASNTYTFVAALQGVEDPSFVKLGMGIHGAALKSNHFADVYVANAL 289

Query: 454 IDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSG 513
           I MYAKCG + +A  +F  M  +  V+WNT++SG   +    +AL  F +M +S  +P  
Sbjct: 290 IAMYAKCGRMEDAERVFASMLCRDYVSWNTLLSGLVQNELYRDALNYFRDMQNSAQKPDQ 349

Query: 514 VTFLSVLYACSHAGLVREGDEIFQSMIH---DHGFK---PLAEHYA--CMVDILGRA--- 562
           V+ L+++ A   +G +  G E+    I    D   +    L + YA  C V  +G A   
Sbjct: 350 VSVLNLIAASGRSGNLLNGKEVHAYAIRNGLDSNMQIGNTLIDMYAKCCCVKHMGYAFEC 409

Query: 563 ----------------GQLEKALEFI--------KGLAVEPGPAVWGALLGACMIHKDTN 598
                            Q E  LE I        KG+ V+  P + G++L AC   K  N
Sbjct: 410 MHEKDLISWTTIIAGYAQNECHLEAINLFRKVQVKGMDVD--PMMIGSVLRACSGLKSRN 467

Query: 599 LARVASEKLFELDPENVGYHVLLSNIYS--AERDYLQAA 635
             R     +F+ D  ++     + N+Y     RDY + A
Sbjct: 468 FIREIHGYVFKRDLADIMLQNAIVNVYGEVGHRDYARRA 506


>gi|38344863|emb|CAE01289.2| OSJNBa0020P07.6 [Oryza sativa Japonica Group]
          Length = 854

 Score =  461 bits (1186), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 268/696 (38%), Positives = 401/696 (57%), Gaps = 22/696 (3%)

Query: 108 NFTYSFVLSAAS----ACCDRSIGVLLHGHAIVSG--YGSDLFVGAALVDLYFKFSWVKS 161
           +FT   VL A S    A     +G   H  A+ +G  +G   F   AL+ +Y +   V  
Sbjct: 162 SFTLVSVLRAVSHLPAAAAAVRLGREAHAFALKNGLLHGHQRFAFNALLSMYARLGLVAD 221

Query: 162 ARKVF-DKMPEK-DTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPA 219
           A+++F    P + D V WN+M+S L+++  F +++    DMV  G    D  + A+ LPA
Sbjct: 222 AQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALG-VRPDGVTFASALPA 280

Query: 220 VAEVQELRLGMEIQCLGLKLG-FHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPD--- 275
            + ++ L +G E+    +K      + +V + LV  Y+   +V +A  +F D+V PD   
Sbjct: 281 CSRLELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKARQVF-DMV-PDSGK 338

Query: 276 -LISCNAMISGYTCNGKTESSLRLFRQLLASAERVN-SSTIVGLIPVFYPFGHLHLTNCI 333
            L   NAMI GY   G  E +LRLF ++ A A  V   +T+  ++P             +
Sbjct: 339 QLGMWNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPACARSEAFAGKEAV 398

Query: 334 HSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLT 393
           H + +K G+  N  V  AL  +Y+RL + + AR++F       + SWN +I G    G  
Sbjct: 399 HGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQGHV 458

Query: 394 EEAISLFQEMQA---SKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVS 450
            +A  L +EMQ      V PN +T+ ++L  CA L A + GK +H        ++++ V 
Sbjct: 459 ADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGYAVRHALDTDVAVG 518

Query: 451 TALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSG-I 509
           +AL+DMYAKCG +  +R +FD +  ++ +TWN +I  YG+HG G EA  LF  M  SG  
Sbjct: 519 SALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEA 578

Query: 510 RPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKAL 569
           RP+ VTF++ L ACSH+G+V  G ++F +M  DHG +P  +  AC+VDILGRAG+L++A 
Sbjct: 579 RPNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILACVVDILGRAGRLDEAY 638

Query: 570 EFIKGLAV-EPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAE 628
             +  +   E   + W  +LGAC +H++ +L  +A E+L EL+PE   ++VLL NIYSA 
Sbjct: 639 AMVTSMETGEQQVSAWSTMLGACRLHRNVHLGEIAGERLLELEPEEASHYVLLCNIYSAA 698

Query: 629 RDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKM 688
             + +AA VR  +++R +AK PGC+ IEV G  H F +G+  HP S  ++A +E L G+M
Sbjct: 699 GQWTRAAEVRSRMRRRGVAKEPGCSWIEVDGAIHRFMAGESAHPASEEVHAHMEALWGEM 758

Query: 689 REAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCH 748
              G+  +T   LHD+++ +K  +++ HSEKLAIAFGL+   PG  IR+ KNLRVC DCH
Sbjct: 759 VARGYTPDTSCVLHDMDDGDKAAVLRCHSEKLAIAFGLLRAAPGATIRVAKNLRVCNDCH 818

Query: 749 TATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
            A KF+SK+ GR IV+RD  RFHHF+ G CSCGDYW
Sbjct: 819 EAAKFLSKMVGREIVLRDVRRFHHFRNGQCSCGDYW 854



 Score = 65.9 bits (159), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 49/239 (20%), Positives = 100/239 (41%), Gaps = 3/239 (1%)

Query: 29  HAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNEMP 88
           H  ++  G   +      L    +    T  AR +F  +  PD+  +N +I G       
Sbjct: 399 HGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQGHV 458

Query: 89  KSSICFYTHLRK--NTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVG 146
             +      +++     + P+  T   +L   +     + G  +HG+A+     +D+ VG
Sbjct: 459 ADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGYAVRHALDTDVAVG 518

Query: 147 AALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGT 206
           +ALVD+Y K   +  +R VFD++P ++T+ WN +I     +    ++  +F  M  +G  
Sbjct: 519 SALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEA 578

Query: 207 WLDSTSVAAVLPAVAEVQELRLGMEI-QCLGLKLGFHDHVYVLTGLVSFYSKCGEVERA 264
             +  +  A L A +    +  G+++   +    G      +L  +V    + G ++ A
Sbjct: 579 RPNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILACVVDILGRAGRLDEA 637


>gi|224122590|ref|XP_002330519.1| predicted protein [Populus trichocarpa]
 gi|222872453|gb|EEF09584.1| predicted protein [Populus trichocarpa]
          Length = 726

 Score =  461 bits (1186), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 257/726 (35%), Positives = 394/726 (54%), Gaps = 4/726 (0%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           A  LFF +P+ +   +N ++ G++     K  +  +  + K        FT S VL   +
Sbjct: 4   AERLFFGMPEKNGVSWNALLNGYAQLGDGKKVLKLFCKM-KECETKFSKFTLSTVLKGCA 62

Query: 120 ACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNS 179
                  G +LH  A+ SG   D F+G +LVD+Y K   V  A KVF K+   D V W++
Sbjct: 63  NTGSLREGKVLHALALRSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKIRNPDVVAWSA 122

Query: 180 MISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKL 239
           MI+GL +    Q++  +F  ++R  G   +  ++++++     + +LR G  I     K 
Sbjct: 123 MITGLDQQGHGQEAAELF-HLMRRKGARPNQFTLSSLVSTATNMGDLRYGQSIHGCICKY 181

Query: 240 GFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLF 299
           GF     V   L+  Y K   VE    +F  +  PDL+S NA++SG+  +       R+F
Sbjct: 182 GFESDNLVSNPLIMMYMKSRCVEDGNKVFEAMTNPDLVSWNALLSGFYDSQTCGRGPRIF 241

Query: 300 RQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRL 359
            Q+L    + N  T + ++              +H+  +K+    +  V TAL  +Y++ 
Sbjct: 242 YQMLLEGFKPNMFTFISVLRSCSSLLDPEFGKQVHAHIIKNSSDDDDFVGTALVDMYAKA 301

Query: 360 NEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSIL 419
             +E A   FD    + + SW  +I+GY Q    E+A+  F++MQ   + PN  T++S L
Sbjct: 302 RCLEDAGVAFDRLVNRDIFSWTVIISGYAQTDQAEKAVKYFRQMQREGIKPNEYTLASCL 361

Query: 420 SACAQLGAISLGKWVHEL-VKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSE 478
           S C+ +  +  G+ +H + VK+ +F  +I+V +AL+D+Y KCG +  A  +F  +  +  
Sbjct: 362 SGCSHMATLENGRQLHAVAVKAGHF-GDIFVGSALVDLYGKCGCMEHAEAIFKGLISRDI 420

Query: 479 VTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQS 538
           V+WNT+ISGY  HG G +AL+ F  ML  GI P   TF+ VL ACS  GLV EG + F S
Sbjct: 421 VSWNTIISGYSQHGQGEKALEAFRMMLSEGIMPDEATFIGVLSACSFMGLVEEGKKRFDS 480

Query: 539 MIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTN 598
           M   +G  P  EHYACMVDILGRAG+  +   FI+ + + P   +W  +LGAC +H + +
Sbjct: 481 MSKIYGINPSIEHYACMVDILGRAGKFNEVKIFIEEMNLTPYSLIWETVLGACKLHGNVD 540

Query: 599 LARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVG 658
               A++KLFE++P     ++LLSNI++++  +     +R ++  R + K PGC+ +EV 
Sbjct: 541 FGEKAAKKLFEMEPMMDSSYILLSNIFASKGRWDDVRNIRALMTSRGIKKEPGCSWVEVD 600

Query: 659 GTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSE 718
           G  HVF S D  HP+   IYA L+KL   +   G+  +T   LH+V  +EK   +  HSE
Sbjct: 601 GQVHVFLSQDGSHPKIREIYAKLDKLGQSLMSIGYVPKTEVVLHNVSNKEKMEHLYYHSE 660

Query: 719 KLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVC 778
           +LA++F L++T     IRI KNLR+C DCH   K IS +T + IVVRD  RFHHFK G C
Sbjct: 661 RLALSFALLSTNAVKPIRIFKNLRICEDCHDFMKLISDITNQEIVVRDIRRFHHFKRGTC 720

Query: 779 SCGDYW 784
           SC D W
Sbjct: 721 SCQDRW 726



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 89/312 (28%), Positives = 155/312 (49%), Gaps = 9/312 (2%)

Query: 261 VERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPV 320
           +E AE LF  +   + +S NA+++GY   G  +  L+LF ++     + +  T+  ++  
Sbjct: 1   MELAERLFFGMPEKNGVSWNALLNGYAQLGDGKKVLKLFCKMKECETKFSKFTLSTVLKG 60

Query: 321 FYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASW 380
               G L     +H+  L+SG   +  +  +L  +YS+   +  A K+F +     + +W
Sbjct: 61  CANTGSLREGKVLHALALRSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKIRNPDVVAW 120

Query: 381 NAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKS 440
           +AMI G  Q G  +EA  LF  M+     PN  T+SS++S    +G +  G+ +H  +  
Sbjct: 121 SAMITGLDQQGHGQEAAELFHLMRRKGARPNQFTLSSLVSTATNMGDLRYGQSIHGCICK 180

Query: 441 RNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQL 500
             FES+  VS  LI MY K   + +  ++F+ M++   V+WN ++SG+          ++
Sbjct: 181 YGFESDNLVSNPLIMMYMKSRCVEDGNKVFEAMTNPDLVSWNALLSGFYDSQTCGRGPRI 240

Query: 501 FSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHY----ACMV 556
           F +ML  G +P+  TF+SVL +CS   L+   D  F   +H H  K  ++        +V
Sbjct: 241 FYQMLLEGFKPNMFTFISVLRSCS--SLL---DPEFGKQVHAHIIKNSSDDDDFVGTALV 295

Query: 557 DILGRAGQLEKA 568
           D+  +A  LE A
Sbjct: 296 DMYAKARCLEDA 307



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 53/195 (27%), Positives = 96/195 (49%), Gaps = 2/195 (1%)

Query: 27  QTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNE 86
           Q HA II +   +D    T L    +  +    A   F  +   D+F + VII G++  +
Sbjct: 274 QVHAHIIKNSSDDDDFVGTALVDMYAKARCLEDAGVAFDRLVNRDIFSWTVIISGYAQTD 333

Query: 87  MPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVG 146
             + ++ ++  +++   + P+ +T +  LS  S       G  LH  A+ +G+  D+FVG
Sbjct: 334 QAEKAVKYFRQMQRE-GIKPNEYTLASCLSGCSHMATLENGRQLHAVAVKAGHFGDIFVG 392

Query: 147 AALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGT 206
           +ALVDLY K   ++ A  +F  +  +D V WN++ISG  ++   + ++  F  M+ + G 
Sbjct: 393 SALVDLYGKCGCMEHAEAIFKGLISRDIVSWNTIISGYSQHGQGEKALEAF-RMMLSEGI 451

Query: 207 WLDSTSVAAVLPAVA 221
             D  +   VL A +
Sbjct: 452 MPDEATFIGVLSACS 466


>gi|297602077|ref|NP_001052059.2| Os04g0118700 [Oryza sativa Japonica Group]
 gi|222628272|gb|EEE60404.1| hypothetical protein OsJ_13579 [Oryza sativa Japonica Group]
 gi|255675134|dbj|BAF13973.2| Os04g0118700 [Oryza sativa Japonica Group]
          Length = 856

 Score =  461 bits (1186), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 268/696 (38%), Positives = 401/696 (57%), Gaps = 22/696 (3%)

Query: 108 NFTYSFVLSAAS----ACCDRSIGVLLHGHAIVSG--YGSDLFVGAALVDLYFKFSWVKS 161
           +FT   VL A S    A     +G   H  A+ +G  +G   F   AL+ +Y +   V  
Sbjct: 164 SFTLVSVLRAVSHLPAAAAAVRLGREAHAFALKNGLLHGHQRFAFNALLSMYARLGLVAD 223

Query: 162 ARKVF-DKMPEK-DTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPA 219
           A+++F    P + D V WN+M+S L+++  F +++    DMV  G    D  + A+ LPA
Sbjct: 224 AQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALG-VRPDGVTFASALPA 282

Query: 220 VAEVQELRLGMEIQCLGLKLG-FHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPD--- 275
            + ++ L +G E+    +K      + +V + LV  Y+   +V +A  +F D+V PD   
Sbjct: 283 CSRLELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKARQVF-DMV-PDSGK 340

Query: 276 -LISCNAMISGYTCNGKTESSLRLFRQLLASAERVN-SSTIVGLIPVFYPFGHLHLTNCI 333
            L   NAMI GY   G  E +LRLF ++ A A  V   +T+  ++P             +
Sbjct: 341 QLGMWNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPACARSEAFAGKEAV 400

Query: 334 HSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLT 393
           H + +K G+  N  V  AL  +Y+RL + + AR++F       + SWN +I G    G  
Sbjct: 401 HGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQGHV 460

Query: 394 EEAISLFQEMQA---SKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVS 450
            +A  L +EMQ      V PN +T+ ++L  CA L A + GK +H        ++++ V 
Sbjct: 461 ADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGYAVRHALDTDVAVG 520

Query: 451 TALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSG-I 509
           +AL+DMYAKCG +  +R +FD +  ++ +TWN +I  YG+HG G EA  LF  M  SG  
Sbjct: 521 SALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEA 580

Query: 510 RPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKAL 569
           RP+ VTF++ L ACSH+G+V  G ++F +M  DHG +P  +  AC+VDILGRAG+L++A 
Sbjct: 581 RPNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILACVVDILGRAGRLDEAY 640

Query: 570 EFIKGLAV-EPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAE 628
             +  +   E   + W  +LGAC +H++ +L  +A E+L EL+PE   ++VLL NIYSA 
Sbjct: 641 AMVTSMETGEQQVSAWSTMLGACRLHRNVHLGEIAGERLLELEPEEASHYVLLCNIYSAA 700

Query: 629 RDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKM 688
             + +AA VR  +++R +AK PGC+ IEV G  H F +G+  HP S  ++A +E L G+M
Sbjct: 701 GQWTRAAEVRSRMRRRGVAKEPGCSWIEVDGAIHRFMAGESAHPASEEVHAHMEALWGEM 760

Query: 689 REAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCH 748
              G+  +T   LHD+++ +K  +++ HSEKLAIAFGL+   PG  IR+ KNLRVC DCH
Sbjct: 761 VARGYTPDTSCVLHDMDDGDKAAVLRCHSEKLAIAFGLLRAAPGATIRVAKNLRVCNDCH 820

Query: 749 TATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
            A KF+SK+ GR IV+RD  RFHHF+ G CSCGDYW
Sbjct: 821 EAAKFLSKMVGREIVLRDVRRFHHFRNGQCSCGDYW 856



 Score = 65.9 bits (159), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 49/239 (20%), Positives = 100/239 (41%), Gaps = 3/239 (1%)

Query: 29  HAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNEMP 88
           H  ++  G   +      L    +    T  AR +F  +  PD+  +N +I G       
Sbjct: 401 HGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQGHV 460

Query: 89  KSSICFYTHLRK--NTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVG 146
             +      +++     + P+  T   +L   +     + G  +HG+A+     +D+ VG
Sbjct: 461 ADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGYAVRHALDTDVAVG 520

Query: 147 AALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGT 206
           +ALVD+Y K   +  +R VFD++P ++T+ WN +I     +    ++  +F  M  +G  
Sbjct: 521 SALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEA 580

Query: 207 WLDSTSVAAVLPAVAEVQELRLGMEI-QCLGLKLGFHDHVYVLTGLVSFYSKCGEVERA 264
             +  +  A L A +    +  G+++   +    G      +L  +V    + G ++ A
Sbjct: 581 RPNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILACVVDILGRAGRLDEA 639


>gi|359488555|ref|XP_003633777.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g01510-like, partial [Vitis vinifera]
          Length = 825

 Score =  461 bits (1186), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 256/729 (35%), Positives = 407/729 (55%), Gaps = 9/729 (1%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           AR LF  + +     + ++I G+S     K +   +  +++     PD  T+  +LS   
Sbjct: 102 ARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQMQR-CGTEPDYVTFVTLLSG-- 158

Query: 120 ACCDRSIG---VLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVL 176
            C    +G     +    I  GY S L VG  LVD Y K + +  A ++F +MPE D+V 
Sbjct: 159 -CNGHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRLDLACQLFKEMPEIDSVS 217

Query: 177 WNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLG 236
           +N+MI+G  K+   + ++ +F +M +N G      + AAVL A   + ++ LG +I    
Sbjct: 218 YNAMITGYSKDGLDEKAVNLFVEM-QNSGLKPTEFTFAAVLCANIGLDDIVLGQQIHSFV 276

Query: 237 LKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSL 296
           +K  F  +V+V   L+ FYSK   V  A  LF ++   D +S N +ISGY  +GK + + 
Sbjct: 277 IKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDGVSYNVIISGYAWDGKHKYAF 336

Query: 297 RLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVY 356
            LFR+L  +A          ++ +        +   IH+  + +   S   V  +L  +Y
Sbjct: 337 DLFRELQFTAFDRKQFPFATMLSIASNTLDWEMGRQIHAQTIVTTADSEILVGNSLVDMY 396

Query: 357 SRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVS 416
           ++  + E A  +F   + +S   W AMI+ Y Q G  EE + LF +M+ + V  +  T +
Sbjct: 397 AKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQASVIADQATFA 456

Query: 417 SILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHK 476
           S+L A A + ++SLGK +H  +    F SN++  +AL+D+YAKCG+I +A + F  M  +
Sbjct: 457 SLLRASASIASLSLGKQLHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAVQTFQEMPDR 516

Query: 477 SEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIF 536
           + V+WN MIS Y  +G     L+ F EM+ SG++P  V+FL VL ACSH+GLV EG   F
Sbjct: 517 NIVSWNAMISAYAQNGEAEATLKSFKEMVLSGLQPDSVSFLGVLSACSHSGLVEEGLWHF 576

Query: 537 QSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKD 596
            SM   +   P  EHYA +VD+L R+G+  +A + +  + ++P   +W ++L AC IHK+
Sbjct: 577 NSMTQIYKLDPRREHYASVVDMLCRSGRFNEAEKLMAEMPIDPDEIMWSSVLNACRIHKN 636

Query: 597 TNLARVASEKLFELDP-ENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLI 655
             LAR A+++LF ++   +   +V +SNIY+A   +   + V + ++ R + K P  + +
Sbjct: 637 QELARRAADQLFNMEELRDAAPYVNMSNIYAAAGQWENVSKVHKAMRDRGVKKLPAYSWV 696

Query: 656 EVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKV 715
           E+    H+F++ D+ HPQ   I   ++ L   M E G++ +T  ALH+ +E+ K   +K 
Sbjct: 697 EIKHETHMFSANDRCHPQIEEIRKKIDMLTKTMEELGYKPDTSCALHNEDEKFKVESLKY 756

Query: 716 HSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKG 775
           HSE+LAIAF LI+T  G+ I ++KNLR C+DCH A K ISK+ GR I VRD+ RFHHF+ 
Sbjct: 757 HSERLAIAFALISTPEGSPILVMKNLRACIDCHAAIKVISKIVGREITVRDSTRFHHFRD 816

Query: 776 GVCSCGDYW 784
           G CSCGD+W
Sbjct: 817 GFCSCGDFW 825



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 145/544 (26%), Positives = 259/544 (47%), Gaps = 12/544 (2%)

Query: 12  FLSLLKGAKTQ---SQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIP 68
           F++LL G       +Q+TQ   QII  G+ + L     L            A  LF  +P
Sbjct: 152 FVTLLSGCNGHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRLDLACQLFKEMP 211

Query: 69  KPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGV 128
           + D   +N +I G+S + + + ++  +  + +N+ L P  FT++ VL A     D  +G 
Sbjct: 212 EIDSVSYNAMITGYSKDGLDEKAVNLFVEM-QNSGLKPTEFTFAAVLCANIGLDDIVLGQ 270

Query: 129 LLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNC 188
            +H   I + +  ++FV  AL+D Y K   V  ARK+FD+MPE+D V +N +ISG   + 
Sbjct: 271 QIHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDGVSYNVIISGYAWDG 330

Query: 189 CFQDSIWVFGDMVRNGGTWLDSTS--VAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVY 246
             + +  +F ++     T  D      A +L   +   +  +G +I    +       + 
Sbjct: 331 KHKYAFDLFREL---QFTAFDRKQFPFATMLSIASNTLDWEMGRQIHAQTIVTTADSEIL 387

Query: 247 VLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASA 306
           V   LV  Y+KCG+ E AE++F ++     +   AMIS Y   G  E  L+LF ++  ++
Sbjct: 388 VGNSLVDMYAKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQAS 447

Query: 307 ERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAAR 366
              + +T   L+        L L   +HSF +KSG +SN    +AL  VY++   ++ A 
Sbjct: 448 VIADQATFASLLRASASIASLSLGKQLHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAV 507

Query: 367 KLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLG 426
           + F E  ++++ SWNAMI+ Y QNG  E  +  F+EM  S + P+ V+   +LSAC+  G
Sbjct: 508 QTFQEMPDRNIVSWNAMISAYAQNGEAEATLKSFKEMVLSGLQPDSVSFLGVLSACSHSG 567

Query: 427 AISLGKW-VHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMS-HKSEVTWNTM 484
            +  G W  + + +    +       +++DM  + G   EA +L   M     E+ W+++
Sbjct: 568 LVEEGLWHFNSMTQIYKLDPRREHYASVVDMLCRSGRFNEAEKLMAEMPIDPDEIMWSSV 627

Query: 485 ISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHG 544
           ++   +H +   A +   ++ +         ++++    + AG      ++ ++M  D G
Sbjct: 628 LNACRIHKNQELARRAADQLFNMEELRDAAPYVNMSNIYAAAGQWENVSKVHKAM-RDRG 686

Query: 545 FKPL 548
            K L
Sbjct: 687 VKKL 690



 Score =  189 bits (480), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 137/491 (27%), Positives = 227/491 (46%), Gaps = 32/491 (6%)

Query: 130 LHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCC 189
           +    + +G+  D       V  + K   +  AR++F+KMP K+TV  N MISG +K+  
Sbjct: 39  IDARIVKTGFDPDTSRSNFRVGNFLKNGELSQARQLFEKMPHKNTVSTNMMISGYVKSGN 98

Query: 190 FQDSIWVFGDMV-RNGGTWLDSTSVAAVLPAVAEVQELRLGM------------------ 230
             ++  +F  MV R   TW       + L    E  EL + M                  
Sbjct: 99  LGEARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQMQRCGTEPDYVTFVTLLSG 158

Query: 231 -----------EIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISC 279
                      ++Q   +KLG+   + V   LV  Y K   ++ A  LF+++   D +S 
Sbjct: 159 CNGHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRLDLACQLFKEMPEIDSVSY 218

Query: 280 NAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLK 339
           NAMI+GY+ +G  E ++ LF ++  S  +    T   ++        + L   IHSF +K
Sbjct: 219 NAMITGYSKDGLDEKAVNLFVEMQNSGLKPTEFTFAAVLCANIGLDDIVLGQQIHSFVIK 278

Query: 340 SGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISL 399
           +  V N  V  AL   YS+ + +  ARKLFDE  E+   S+N +I+GY  +G  + A  L
Sbjct: 279 TNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDGVSYNVIISGYAWDGKHKYAFDL 338

Query: 400 FQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAK 459
           F+E+Q +         +++LS  +      +G+ +H        +S I V  +L+DMYAK
Sbjct: 339 FRELQFTAFDRKQFPFATMLSIASNTLDWEMGRQIHAQTIVTTADSEILVGNSLVDMYAK 398

Query: 460 CGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSV 519
           CG   EA  +F  ++H+S V W  MIS Y   G   E LQLF++M  + +     TF S+
Sbjct: 399 CGKFEEAEMIFTNLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQASVIADQATFASL 458

Query: 520 LYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEP 579
           L A +    +  G ++  S I   GF       + ++D+  + G ++ A++  + +  + 
Sbjct: 459 LRASASIASLSLGKQL-HSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAVQTFQEMP-DR 516

Query: 580 GPAVWGALLGA 590
               W A++ A
Sbjct: 517 NIVSWNAMISA 527


>gi|297739440|emb|CBI29622.3| unnamed protein product [Vitis vinifera]
          Length = 603

 Score =  461 bits (1185), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 269/705 (38%), Positives = 383/705 (54%), Gaps = 119/705 (16%)

Query: 94  FYTHLR------------KNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGS 141
           FY+HL+            +   + PD F Y  ++ +A      + G+  H H +  G+GS
Sbjct: 4   FYSHLQDHAKVVLMYEQMQGCGVRPDAFVYPILIKSAG-----TGGIGFHAHVLKLGHGS 58

Query: 142 DLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMV 201
           D FV  A++D+Y        ARKV D         WN+M+SG  K      + W+F  M 
Sbjct: 59  DAFVRNAVIDMY--------ARKVAD---------WNAMVSGYWKWESEGQAQWLFDVMP 101

Query: 202 -RNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGE 260
            RN  TW                                         T +V+ Y+K  +
Sbjct: 102 ERNVITW-----------------------------------------TAMVTGYAKVKD 120

Query: 261 VERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPV 320
           +E A   F  +    ++S NAM+SGY  NG  E +LRLF ++L                 
Sbjct: 121 LEAARRYFDCMPERSVVSWNAMLSGYAQNGLAEEALRLFDEML----------------- 163

Query: 321 FYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASW 380
                               G   NS    A+ + Y R+ ++++ARKLF+    +++ +W
Sbjct: 164 --------------------GAYRNSVTWNAMISAYMRVGDLDSARKLFNTMPGRNVVTW 203

Query: 381 NAMIAGYTQNGLTEEAISLFQEM-QASKVAPNPVTVSSILSACAQLGAISLGKWVHELVK 439
           N+MIAGY QNG +  AI LF+EM  A K+ P+ VT+ S++SAC  LGA+ LG WV   + 
Sbjct: 204 NSMIAGYAQNGQSAMAIELFKEMITAKKLTPDEVTMVSVISACGHLGALELGNWVVRFLT 263

Query: 440 SRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQ 499
               + +I    A+I MY++CG++ +A+ +F  M+ +  V++NT+ISG+  HGHG+EA+ 
Sbjct: 264 ENQIKLSISGHNAMIFMYSRCGSMEDAKRVFQEMATRDVVSYNTLISGFAAHGHGVEAIN 323

Query: 500 LFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDIL 559
           L S M   GI P  VTF+ VL ACSHAGL+ EG ++F+S I D    P  +HYACMVD+L
Sbjct: 324 LMSTMKEGGIEPDRVTFIGVLTACSHAGLLEEGRKVFES-IKD----PAIDHYACMVDLL 378

Query: 560 GRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHV 619
           GR G+LE A   ++ + +EP   V+G+LL A  IHK   L  +A+ KLFEL+P+N G  +
Sbjct: 379 GRVGELEDAKRTMERMPMEPHAGVYGSLLNASRIHKQVELGELAANKLFELEPDNSGNFI 438

Query: 620 LLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYA 679
           LLSNIY++   +     +R+ +KK  + K  G + +E GG  H F   D+ H +S  IY 
Sbjct: 439 LLSNIYASAGRWKDVERIREAMKKGGVKKTTGWSWVEYGGKLHKFIVADRSHERSDDIYQ 498

Query: 680 MLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIK 739
           +L +L  KMREAG+  +    L DVEEEEKE ++  HSEKLAI + L+ +E G  IR++K
Sbjct: 499 LLIELRKKMREAGYIADKSCVLRDVEEEEKEEIVGTHSEKLAICYALLVSEAGAVIRVVK 558

Query: 740 NLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           NLRVC DCHTA K ISK+ GRVI+VRD NRFH F  G+CSC DYW
Sbjct: 559 NLRVCWDCHTAIKMISKLEGRVIIVRDNNRFHCFNDGLCSCKDYW 603


>gi|297600629|ref|NP_001049519.2| Os03g0241800 [Oryza sativa Japonica Group]
 gi|108707104|gb|ABF94899.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|255674356|dbj|BAF11433.2| Os03g0241800 [Oryza sativa Japonica Group]
          Length = 810

 Score =  461 bits (1185), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 238/615 (38%), Positives = 353/615 (57%), Gaps = 35/615 (5%)

Query: 165 VFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNG-GTWLDSTSVAAVLPAVAEV 223
           V D  P++ TV +N ++ GL      +D++ +F  M   G   + D  +    L + A  
Sbjct: 76  VLDASPDRTTVFFNVLLRGLTAASLHRDALLLFASMRPQGHACFPDHYTYPLALKSCAAT 135

Query: 224 QELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMI 283
             L LG +I     +LG   +V+V    +S Y++CG  + A  +F ++   D++S NAMI
Sbjct: 136 DGLVLGRQIHSSTARLGLDGNVFVAHSAISMYARCGRPDDAYQMFEEMQYRDVVSWNAMI 195

Query: 284 SGYTCNGKTESSLRLFRQLLA-SAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGI 342
           SG+   G    ++ +FR+L+A    + ++ T+  ++P                       
Sbjct: 196 SGFAHAGLFGRAMDVFRELVALQCPKPDAGTMASILP----------------------- 232

Query: 343 VSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQE 402
                     S   +R+ ++   + +FDE   K L SWNAM+A YT N +  EA+ LF  
Sbjct: 233 ----------SMGKARVEDIALLKGVFDEMRFKGLISWNAMLAVYTNNEMHVEAVELFMR 282

Query: 403 MQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGN 462
           MQ   + P+ VT++++L +C ++ A+SLGK +HE++K R   S++ +  AL+DMYA CG 
Sbjct: 283 MQKDGIEPDAVTLATVLPSCGEVSALSLGKRIHEVIKRRRMCSSMLLENALMDMYANCGC 342

Query: 463 IVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYA 522
           + EAR++FD M  +  V+W ++IS YG HGHG EA+ LF +M   G+ P  + F+++L A
Sbjct: 343 LKEARDVFDSMGTRDVVSWTSIISAYGRHGHGREAIDLFEKMCGQGLEPDSIAFVAILAA 402

Query: 523 CSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPA 582
           CSHAGL+  G   F SM  +    P  EHYACMVD+LGRAG + +A +FI  + ++P   
Sbjct: 403 CSHAGLLDMGKHYFYSMTSEFHIAPKLEHYACMVDLLGRAGCIREAYDFIMVMPIKPNER 462

Query: 583 VWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVK 642
           VWGALLGAC IH + ++  +A++ L  L P+  GY+VLLSNIY+    +   + VR V++
Sbjct: 463 VWGALLGACRIHSNMDIGLLAADSLLRLAPKQTGYYVLLSNIYARAGRWADVSMVRSVME 522

Query: 643 KRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALH 702
            + + K PG +  E+G   H F  GD  HPQS  IY  L +L  ++RE G+  E    LH
Sbjct: 523 SKGIKKLPGVSNAELGDRVHTFHIGDTSHPQSKMIYKKLSELLRRIREMGYNPEVEATLH 582

Query: 703 DVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVI 762
           DVEEE+KE  + VHSEKLAIAF LI T PGT IRI  NLR C DCH A K IS + GR I
Sbjct: 583 DVEEEDKEGHLSVHSEKLAIAFLLINTNPGTPIRITMNLRTCSDCHHAAKLISTIAGREI 642

Query: 763 VVRDANRFHHFKGGV 777
           +++D NR H+ K  +
Sbjct: 643 ILKDVNRIHYMKCNI 657



 Score =  142 bits (357), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 113/486 (23%), Positives = 220/486 (45%), Gaps = 42/486 (8%)

Query: 68  PKPDLFLFNVIIRGFSNNEMPKSSICFYTHLR-KNTALTPDNFTYSFVLSAASACCDRSI 126
           P      FNV++RG +   + + ++  +  +R +  A  PD++TY   L + +A     +
Sbjct: 81  PDRTTVFFNVLLRGLTAASLHRDALLLFASMRPQGHACFPDHYTYPLALKSCAATDGLVL 140

Query: 127 GVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMK 186
           G  +H      G   ++FV  + + +Y +      A ++F++M  +D V WN+MISG   
Sbjct: 141 GRQIHSSTARLGLDGNVFVAHSAISMYARCGRPDDAYQMFEEMQYRDVVSWNAMISGFAH 200

Query: 187 NCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVY 246
              F  ++ VF ++V       D+ ++A++LP++ + +       ++ + L  G  D   
Sbjct: 201 AGLFGRAMDVFRELVALQCPKPDAGTMASILPSMGKAR-------VEDIALLKGVFD--- 250

Query: 247 VLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASA 306
                             E+ F+      LIS NAM++ YT N     ++ LF ++    
Sbjct: 251 ------------------EMRFK-----GLISWNAMLAVYTNNEMHVEAVELFMRMQKDG 287

Query: 307 ERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAAR 366
              ++ T+  ++P       L L   IH    +  + S+  +  AL  +Y+    ++ AR
Sbjct: 288 IEPDAVTLATVLPSCGEVSALSLGKRIHEVIKRRRMCSSMLLENALMDMYANCGCLKEAR 347

Query: 367 KLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLG 426
            +FD    + + SW ++I+ Y ++G   EAI LF++M    + P+ +   +IL+AC+  G
Sbjct: 348 DVFDSMGTRDVVSWTSIISAYGRHGHGREAIDLFEKMCGQGLEPDSIAFVAILAACSHAG 407

Query: 427 AISLGK-WVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHK-SEVTWNTM 484
            + +GK + + +    +    +     ++D+  + G I EA +   +M  K +E  W  +
Sbjct: 408 LLDMGKHYFYSMTSEFHIAPKLEHYACMVDLLGRAGCIREAYDFIMVMPIKPNERVWGAL 467

Query: 485 ISGYGLHGHGLEALQLFSEMLHSGIRPSG-VTFLSVLYACSHAGLVREGD-EIFQSMIHD 542
           +    +H +    L     +L    + +G    LS +YA   AG  R  D  + +S++  
Sbjct: 468 LGACRIHSNMDIGLLAADSLLRLAPKQTGYYVLLSNIYA--RAG--RWADVSMVRSVMES 523

Query: 543 HGFKPL 548
            G K L
Sbjct: 524 KGIKKL 529


>gi|125547017|gb|EAY92839.1| hypothetical protein OsI_14639 [Oryza sativa Indica Group]
          Length = 702

 Score =  461 bits (1185), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 269/696 (38%), Positives = 402/696 (57%), Gaps = 22/696 (3%)

Query: 108 NFTYSFVLSAAS----ACCDRSIGVLLHGHAIVSG--YGSDLFVGAALVDLYFKFSWVKS 161
           +FT   VL A S    A     +G   H  A+ +G  +G   F   AL+ +Y +   V  
Sbjct: 10  SFTLVSVLRAVSHLPAAAAAVRLGREAHAFALKNGLLHGHQRFAFNALLSMYARLGLVAD 69

Query: 162 ARKVF-DKMPEK-DTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPA 219
           A+++F    P + D V WN+M+S L+++  F +++    DMV  G    D  + A+ LPA
Sbjct: 70  AQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALG-VRPDGVTFASALPA 128

Query: 220 VAEVQELRLGMEIQCLGLKLG-FHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPD--- 275
            + ++ L +G E+    +K      + +V + LV  Y+   +V +A  +F D+V PD   
Sbjct: 129 CSRLELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKARQVF-DMV-PDSGK 186

Query: 276 -LISCNAMISGYTCNGKTESSLRLFRQLLASAERVN-SSTIVGLIPVFYPFGHLHLTNCI 333
            L   NAMI GY   G  E +LRLF ++ A A  V   +T+  ++P             +
Sbjct: 187 QLGMWNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPACARSEAFAGKEAV 246

Query: 334 HSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLT 393
           H + +K G+  N  V  AL  +Y+RL + + AR++F       + SWN +I G    G  
Sbjct: 247 HGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQGHV 306

Query: 394 EEAISLFQEMQA---SKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVS 450
            +A  L +EMQ      V PN +T+ ++L  CA L A + GK +H        ++++ V 
Sbjct: 307 ADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGYAVRHALDTDVAVG 366

Query: 451 TALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSG-I 509
           +AL+DMYAKCG +  +R +FD +  ++ +TWN +I  YG+HG G EA  LF  M  SG  
Sbjct: 367 SALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEA 426

Query: 510 RPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKAL 569
           RP+ VTF++ L ACSH+G+V  G ++F +M  DHG +P  +  AC+VDILGRAG+L++A 
Sbjct: 427 RPNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILACVVDILGRAGRLDEAY 486

Query: 570 EFIKGL-AVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAE 628
             +  + A E   + W  +LGAC +H++ +L  +A E+L EL+PE   ++VLL NIYSA 
Sbjct: 487 AMVTSMEAGEQQVSAWSTMLGACRLHRNVHLGEIAGERLLELEPEEASHYVLLCNIYSAA 546

Query: 629 RDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKM 688
             + +AA VR  +++R +AK PGC+ IEV G  H F +G+  HP S  ++A +E L G+M
Sbjct: 547 GQWTRAAEVRSRMRRRGVAKEPGCSWIEVDGAIHRFMAGESAHPASEEVHAHMEALWGEM 606

Query: 689 REAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCH 748
              G+  +T   LHD+++ +K  +++ HSEKLAIAFGL+   PG  IR+ KNLRVC DCH
Sbjct: 607 VARGYTPDTSCVLHDMDDGDKAAVLRCHSEKLAIAFGLLRAAPGATIRVAKNLRVCNDCH 666

Query: 749 TATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
            A KF+SK+ GR IV+RD  RFHHF+ G CSCGDYW
Sbjct: 667 EAAKFLSKMVGREIVLRDVRRFHHFRNGQCSCGDYW 702



 Score = 65.9 bits (159), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 49/240 (20%), Positives = 100/240 (41%), Gaps = 3/240 (1%)

Query: 28  THAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNEM 87
            H  ++  G   +      L    +    T  AR +F  +  PD+  +N +I G      
Sbjct: 246 VHGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQGH 305

Query: 88  PKSSICFYTHLRK--NTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFV 145
              +      +++     + P+  T   +L   +     + G  +HG+A+     +D+ V
Sbjct: 306 VADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGYAVRHALDTDVAV 365

Query: 146 GAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGG 205
           G+ALVD+Y K   +  +R VFD++P ++T+ WN +I     +    ++  +F  M  +G 
Sbjct: 366 GSALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEATVLFDRMTASGE 425

Query: 206 TWLDSTSVAAVLPAVAEVQELRLGMEI-QCLGLKLGFHDHVYVLTGLVSFYSKCGEVERA 264
              +  +  A L A +    +  G+++   +    G      +L  +V    + G ++ A
Sbjct: 426 ARPNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILACVVDILGRAGRLDEA 485


>gi|297740529|emb|CBI30711.3| unnamed protein product [Vitis vinifera]
          Length = 697

 Score =  461 bits (1185), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 242/643 (37%), Positives = 363/643 (56%), Gaps = 80/643 (12%)

Query: 142 DLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMV 201
           D  +G+ LV +Y     ++  R++FDK+  +   LWN +++G  K   F++S+ +F  M 
Sbjct: 135 DGVLGSKLVFMYVTCGDLREGRRIFDKVANEKVFLWNLLMNGYAKIGNFRESLSLFKRMR 194

Query: 202 RNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEV 261
                                            LG++                      V
Sbjct: 195 E--------------------------------LGIR---------------------RV 201

Query: 262 ERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVF 321
           E A  LF ++   D+IS N+MISGY  NG +E  L LF Q+L      + +T+V +    
Sbjct: 202 ESARKLFDELGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSV---- 257

Query: 322 YPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWN 381
                L L NC                   L  +YS+   + +A ++F+   E+S+ SW 
Sbjct: 258 ----ELTLNNC-------------------LLDMYSKSGNLNSAIQVFETMGERSVVSWT 294

Query: 382 AMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSR 441
           +MIAGY + GL++ ++ LF EM+   + PN +T++ IL ACA L A+  G+ +H  +   
Sbjct: 295 SMIAGYAREGLSDMSVRLFHEMEKEDLFPNSITMACILPACASLAALERGQEIHGHILRN 354

Query: 442 NFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLF 501
            F  + +V+ AL+DMY KCG +  AR LFD++  K  V+W  MI+GYG+HG+G EA+  F
Sbjct: 355 GFSLDRHVANALVDMYLKCGALGLARLLFDMIPEKDLVSWTVMIAGYGMHGYGSEAIAAF 414

Query: 502 SEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGR 561
           +EM +SGI P  V+F+S+LYACSH+GL+ EG   F  M ++   +P +EHYAC+VD+L R
Sbjct: 415 NEMRNSGIEPDEVSFISILYACSHSGLLDEGWGFFNMMRNNCCIEPKSEHYACIVDLLAR 474

Query: 562 AGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLL 621
           AG L KA +FIK + +EP   +WGALL  C I+ D  LA   +E +FEL+PEN GY+VLL
Sbjct: 475 AGNLSKAYKFIKMMPIEPDATIWGALLCGCRIYHDVKLAEKVAEHVFELEPENTGYYVLL 534

Query: 622 SNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAML 681
           +NIY+    + +   +R+ + +R L K PGC+ IE+ G  H+F +GD  HP +  I  +L
Sbjct: 535 ANIYAEAEKWEEVKKLRERIGRRGLRKNPGCSWIEIKGKVHIFVTGDSSHPLANKIELLL 594

Query: 682 EKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNL 741
           +K   +M+E G   +   AL   ++ EKE+ +  HSEK+A+AFG+++  PG  +R+ KNL
Sbjct: 595 KKTRTRMKEEGHFPKMRYALIKADDTEKEMALCGHSEKIAMAFGILSLPPGKTVRVTKNL 654

Query: 742 RVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           RVC DCH   KF+SK+  R I++RD+NRFHHFK G CSC  +W
Sbjct: 655 RVCGDCHEMAKFMSKMVKRDIILRDSNRFHHFKDGSCSCRGHW 697



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 102/362 (28%), Positives = 174/362 (48%), Gaps = 32/362 (8%)

Query: 128 VLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKN 187
           +L++G+A +  +   L +   + +L  +   V+SARK+FD++ ++D + WNSMISG + N
Sbjct: 172 LLMNGYAKIGNFRESLSLFKRMRELGIRR--VESARKLFDELGDRDVISWNSMISGYVSN 229

Query: 188 CCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYV 247
              +  + +F  M+  G     +T +A ++       EL L     C             
Sbjct: 230 GLSEKGLDLFEQMLLLG----INTDLATMVSV-----ELTLN---NC------------- 264

Query: 248 LTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAE 307
              L+  YSK G +  A  +F  +    ++S  +MI+GY   G ++ S+RLF ++     
Sbjct: 265 ---LLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSVRLFHEMEKEDL 321

Query: 308 RVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARK 367
             NS T+  ++P       L     IH   L++G   +  V  AL  +Y +   +  AR 
Sbjct: 322 FPNSITMACILPACASLAALERGQEIHGHILRNGFSLDRHVANALVDMYLKCGALGLARL 381

Query: 368 LFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGA 427
           LFD   EK L SW  MIAGY  +G   EAI+ F EM+ S + P+ V+  SIL AC+  G 
Sbjct: 382 LFDMIPEKDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISILYACSHSGL 441

Query: 428 ISLGKWVHELVKSR-NFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVT-WNTMI 485
           +  G     ++++    E        ++D+ A+ GN+ +A +   +M  + + T W  ++
Sbjct: 442 LDEGWGFFNMMRNNCCIEPKSEHYACIVDLLARAGNLSKAYKFIKMMPIEPDATIWGALL 501

Query: 486 SG 487
            G
Sbjct: 502 CG 503



 Score = 79.0 bits (193), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 57/244 (23%), Positives = 112/244 (45%), Gaps = 24/244 (9%)

Query: 368 LFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGA 427
           L  E+ +  +  +N  I  + + G    A+ L    Q+ K      T  S+L  CA L +
Sbjct: 59  LPSETIDCKITDYNIEICRFCELGNLRRAMELIN--QSPKPDLELRTYCSVLQLCADLKS 116

Query: 428 ISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISG 487
           I  G+ +H +++S + E +  + + L+ MY  CG++ E R +FD ++++    WN +++G
Sbjct: 117 IQDGRRIHSIIQSNDVEVDGVLGSKLVFMYVTCGDLREGRRIFDKVANEKVFLWNLLMNG 176

Query: 488 YGLHGHGLEALQLFSEMLHSGIR--------------PSGVTFLSVLYACSHAGLVREGD 533
           Y   G+  E+L LF  M   GIR                 +++ S++      GL  +G 
Sbjct: 177 YAKIGNFRESLSLFKRMRELGIRRVESARKLFDELGDRDVISWNSMISGYVSNGLSEKGL 236

Query: 534 EIFQSMIHDHGFKPLAEHYA-------CMVDILGRAGQLEKALEFIKGLAVEPGPAVWGA 586
           ++F+ M+       LA   +       C++D+  ++G L  A++  + +  E     W +
Sbjct: 237 DLFEQMLLLGINTDLATMVSVELTLNNCLLDMYSKSGNLNSAIQVFETMG-ERSVVSWTS 295

Query: 587 LLGA 590
           ++  
Sbjct: 296 MIAG 299



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 53/199 (26%), Positives = 99/199 (49%), Gaps = 10/199 (5%)

Query: 31  QIIIHGFQNDLSTVTKLAHRLSDFKATCYARA--------LFFSIPKPDLFLFNVIIRGF 82
           Q+++ G   DL+T+  +   L++     Y+++        +F ++ +  +  +  +I G+
Sbjct: 241 QMLLLGINTDLATMVSVELTLNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGY 300

Query: 83  SNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSD 142
           +   +   S+  +  + K   L P++ T + +L A ++      G  +HGH + +G+  D
Sbjct: 301 AREGLSDMSVRLFHEMEKED-LFPNSITMACILPACASLAALERGQEIHGHILRNGFSLD 359

Query: 143 LFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVR 202
             V  ALVD+Y K   +  AR +FD +PEKD V W  MI+G   +    ++I  F +M R
Sbjct: 360 RHVANALVDMYLKCGALGLARLLFDMIPEKDLVSWTVMIAGYGMHGYGSEAIAAFNEM-R 418

Query: 203 NGGTWLDSTSVAAVLPAVA 221
           N G   D  S  ++L A +
Sbjct: 419 NSGIEPDEVSFISILYACS 437



 Score = 49.3 bits (116), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 41/164 (25%), Positives = 69/164 (42%), Gaps = 13/164 (7%)

Query: 27  QTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNE 86
           + H  I+ +GF  D      L        A   AR LF  IP+ DL  + V+I G+  + 
Sbjct: 346 EIHGHILRNGFSLDRHVANALVDMYLKCGALGLARLLFDMIPEKDLVSWTVMIAGYGMHG 405

Query: 87  MPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVG 146
               +I  +  +R N+ + PD  ++  +L A S       G+L  G    +   ++  + 
Sbjct: 406 YGSEAIAAFNEMR-NSGIEPDEVSFISILYACSHS-----GLLDEGWGFFNMMRNNCCIE 459

Query: 147 ------AALVDLYFKFSWVKSARKVFDKMP-EKDTVLWNSMISG 183
                 A +VDL  +   +  A K    MP E D  +W +++ G
Sbjct: 460 PKSEHYACIVDLLARAGNLSKAYKFIKMMPIEPDATIWGALLCG 503


>gi|449508565|ref|XP_004163348.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At3g23330-like [Cucumis
           sativus]
          Length = 712

 Score =  461 bits (1185), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 245/665 (36%), Positives = 380/665 (57%), Gaps = 33/665 (4%)

Query: 152 LYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDST 211
           +Y   + +  + ++F+ +     + W S+I     +     S+  F  M+ +G  + D  
Sbjct: 49  IYSHINLLHDSLRLFNTIHFPPALAWKSVIRCYTSHGLPHQSLGSFIGMLASG-LYPDHN 107

Query: 212 SVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSK-------------C 258
              +VL + A + +L LG  +    +++G    +Y    L++ YSK              
Sbjct: 108 VFPSVLKSCALLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRLGA 167

Query: 259 GEV-----ERAE------LLFRDIVRP--------DLISCNAMISGYTCNGKTESSLRLF 299
           GEV     ER        +L  D VR         DL+S N +I+G   NG  E +LR+ 
Sbjct: 168 GEVFDEMTERTRSVRTVSVLSEDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRMI 227

Query: 300 RQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRL 359
           R++  +  + +S T+  ++P+      +     IH   ++ G+ ++  V ++L  +Y++ 
Sbjct: 228 REMGGANLKPDSFTLSSVLPLIAENVDISRGKEIHGCSIRQGLDADIYVASSLIDMYAKC 287

Query: 360 NEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSIL 419
             +  + ++F   +E+   SWN++IAG  QNGL +E +  F++M  +K+ P   + SSI+
Sbjct: 288 TRVADSCRVFTLLTERDGISWNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIM 347

Query: 420 SACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEV 479
            ACA L  + LGK +H  +    F+ NI+++++L+DMYAKCGNI  A+++FD M  +  V
Sbjct: 348 PACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLRDMV 407

Query: 480 TWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSM 539
           +W  MI G  LHG   +A++LF +M   GI+P+ V F++VL ACSH GLV E  + F SM
Sbjct: 408 SWTAMIMGCALHGQAPDAIELFEQMETEGIKPNHVAFMAVLTACSHGGLVDEAWKYFNSM 467

Query: 540 IHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNL 599
             D G  P  EHYA + D+LGRAG+LE+A +FI G+ + P  ++W  LL AC +H + ++
Sbjct: 468 TRDFGIAPGVEHYAAVSDLLGRAGRLEEAYDFICGMHIGPTGSIWATLLSACRVHXNIDM 527

Query: 600 ARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGG 659
           A   + ++ E+DP N G ++LL+NIYSA R + +AA  R  +++  + K P C+ IEV  
Sbjct: 528 AEKVANRILEVDPNNTGAYILLANIYSAARRWKEAAKWRASMRRIGIRKTPACSWIEVKN 587

Query: 660 TPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEK 719
             + F +GD+ HP    I   +E L   M + G+  +T    HDVEEE+K+ ++  HSE+
Sbjct: 588 KVYAFMAGDESHPCYEKIREAMEVLVELMEKEGYVPDTSEVHHDVEEEQKKYLVCSHSER 647

Query: 720 LAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCS 779
           LAI FG+I T  G  IR+ KNLRVC DCHTATKFISK+ GR IVVRD +RFHHFK G CS
Sbjct: 648 LAIVFGIINTPAGMTIRVTKNLRVCTDCHTATKFISKIVGREIVVRDNSRFHHFKNGTCS 707

Query: 780 CGDYW 784
           CGDYW
Sbjct: 708 CGDYW 712



 Score =  195 bits (496), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 133/509 (26%), Positives = 245/509 (48%), Gaps = 43/509 (8%)

Query: 20  KTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRL-SDFKATCYARALFFSIPKPDLFLFNVI 78
           K++SQ  Q HAQ++   FQ        L   + S       +  LF +I  P    +  +
Sbjct: 20  KSRSQAQQLHAQVL--KFQASSLCNLSLLLSIYSHINLLHDSLRLFNTIHFPPALAWKSV 77

Query: 79  IRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSG 138
           IR ++++ +P  S+  +  +   + L PD+  +  VL + +   D ++G  LHG+ I  G
Sbjct: 78  IRCYTSHGLPHQSLGSFIGMLA-SGLYPDHNVFPSVLKSCALLMDLNLGESLHGYIIRVG 136

Query: 139 YGSDLFVGAALVDLYFKFSWVK--------------------------------SARKVF 166
              DL+ G AL+++Y K  +++                                S RK+F
Sbjct: 137 LDFDLYTGNALMNMYSKLRFLEESGRQRLGAGEVFDEMTERTRSVRTVSVLSEDSVRKIF 196

Query: 167 DKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWL--DSTSVAAVLPAVAEVQ 224
           + MPEKD V WN++I+G  +N  +++++ +  +M   GG  L  DS ++++VLP +AE  
Sbjct: 197 EMMPEKDLVSWNTIIAGNARNGLYEETLRMIREM---GGANLKPDSFTLSSVLPLIAENV 253

Query: 225 ELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMIS 284
           ++  G EI    ++ G    +YV + L+  Y+KC  V  +  +F  +   D IS N++I+
Sbjct: 254 DISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCTRVADSCRVFTLLTERDGISWNSIIA 313

Query: 285 GYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVS 344
           G   NG  +  LR FRQ+L +  +  S +   ++P       LHL   +H +  ++G   
Sbjct: 314 GCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDE 373

Query: 345 NSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQ 404
           N  + ++L  +Y++   +  A+++FD    + + SW AMI G   +G   +AI LF++M+
Sbjct: 374 NIFIASSLVDMYAKCGNIRTAKQIFDRMRLRDMVSWTAMIMGCALHGQAPDAIELFEQME 433

Query: 405 ASKVAPNPVTVSSILSACAQLGAISLG-KWVHELVKSRNFESNIYVSTALIDMYAKCGNI 463
              + PN V   ++L+AC+  G +    K+ + + +       +    A+ D+  + G +
Sbjct: 434 TEGIKPNHVAFMAVLTACSHGGLVDEAWKYFNSMTRDFGIAPGVEHYAAVSDLLGRAGRL 493

Query: 464 VEARELFDLMS-HKSEVTWNTMISGYGLH 491
            EA +    M    +   W T++S   +H
Sbjct: 494 EEAYDFICGMHIGPTGSIWATLLSACRVH 522


>gi|449435966|ref|XP_004135765.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g48910-like [Cucumis sativus]
          Length = 666

 Score =  460 bits (1184), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 247/657 (37%), Positives = 368/657 (56%), Gaps = 44/657 (6%)

Query: 130 LHGHAIVSGYGSDLFVGAALVDLYFK--FSWVKSARKVFDKMPEKDTVLWNSMISGLMKN 187
           LHG  + SG+  D +V  AL+  Y    FS    A KVF  +P  +  +WN +I G ++N
Sbjct: 52  LHGLVLRSGHFQDHYVSGALLKCYANPHFSNFDFALKVFSSIPNPNVFIWNIVIKGCLEN 111

Query: 188 CCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYV 247
                +I+ +G MV +     +  +   +  A +  Q ++ G +I    +K G    V++
Sbjct: 112 NKLFKAIYFYGRMVIDARP--NKFTYPTLFKACSVAQAVQEGRQIHGHVVKHGIGSDVHI 169

Query: 248 LTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAE 307
            +  +  Y+  G +E A  +F      D++  N MI GY   G  E++  LF Q+     
Sbjct: 170 KSAGIHMYASFGRLEDARKMFYS-GESDVVCWNTMIDGYLKCGVLEAAKGLFAQM----- 223

Query: 308 RVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARK 367
                          P  ++   N + +   K G + +                   ARK
Sbjct: 224 ---------------PVKNIGSWNVMINGLAKGGNLGD-------------------ARK 249

Query: 368 LFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGA 427
           LFDE SE+   SW++M+ GY   G  +EA+ +FQ+MQ  +  P    +SS+L+AC+ +GA
Sbjct: 250 LFDEMSERDEISWSSMVDGYISAGRYKEALEIFQQMQREETRPGRFILSSVLAACSNIGA 309

Query: 428 ISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISG 487
           I  G+WVH  +K  + + +  + TAL+DMYAKCG +    E+F+ M  +   TWN MI G
Sbjct: 310 IDQGRWVHAYLKRNSIKLDAVLGTALLDMYAKCGRLDMGWEVFEEMKEREIFTWNAMIGG 369

Query: 488 YGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKP 547
             +HG   +AL+LFS++    ++P+G+T + VL AC+HAG V +G  IFQ+M   +G  P
Sbjct: 370 LAIHGRAEDALELFSKLQEGRMKPNGITLVGVLTACAHAGFVDKGLRIFQTMREFYGVDP 429

Query: 548 LAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKL 607
             EHY CMVD+LGR+G   +A + I  + ++P  AVWGALLGAC IH + +LA    + L
Sbjct: 430 ELEHYGCMVDLLGRSGLFSEAEDLINSMPMKPNAAVWGALLGACRIHGNFDLAERVGKIL 489

Query: 608 FELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSG 667
            EL+P+N G +VLLSNIY+    +   + +R+++K R +   PG +++++ GT H F  G
Sbjct: 490 LELEPQNSGRYVLLSNIYAKVGRFDDVSKIRKLMKDRGIKTVPGVSIVDLNGTVHEFKMG 549

Query: 668 DQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLI 727
           D  HPQ   IY  L+ +  +++ AG   +T   L D++EEEKE  +  HSEKLAIAFGLI
Sbjct: 550 DGSHPQMKEIYRKLKIIKERLQMAGHSPDTSQVLFDIDEEEKETAVNYHSEKLAIAFGLI 609

Query: 728 ATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
            T PG  I I+KNLRVC DCH+ATK IS++  R I+VRD  R+HHFK G CSC D+W
Sbjct: 610 NTLPGKRIHIVKNLRVCDDCHSATKLISQIFDREIIVRDRVRYHHFKNGTCSCKDFW 666



 Score =  175 bits (444), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 125/504 (24%), Positives = 229/504 (45%), Gaps = 67/504 (13%)

Query: 4   KTPQSRNLFLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARA- 62
           K PQ   L L   K   +   LTQ H  ++  G   D        H +S     CYA   
Sbjct: 28  KLPQKTVLKLFDSKSITSLQYLTQLHGLVLRSGHFQD--------HYVSGALLKCYANPH 79

Query: 63  ---------LFFSIPKPDLFLFNVIIRG-FSNNEMPKSSICFYTHLRKNTALTPDNFTYS 112
                    +F SIP P++F++N++I+G   NN++ K+ I FY  +  +    P+ FTY 
Sbjct: 80  FSNFDFALKVFSSIPNPNVFIWNIVIKGCLENNKLFKA-IYFYGRMVIDA--RPNKFTYP 136

Query: 113 FVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEK 172
            +  A S       G  +HGH +  G GSD+ + +A + +Y  F  ++ ARK+F    E 
Sbjct: 137 TLFKACSVAQAVQEGRQIHGHVVKHGIGSDVHIKSAGIHMYASFGRLEDARKMF-YSGES 195

Query: 173 DTVLWNSMISGLMKNCCFQDSIWVFGDM-VRNGGTWLDSTSVAAVLPAVAEVQELRLGME 231
           D V WN+MI G +K    + +  +F  M V+N G+W                        
Sbjct: 196 DVVCWNTMIDGYLKCGVLEAAKGLFAQMPVKNIGSW------------------------ 231

Query: 232 IQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGK 291
                              +++  +K G +  A  LF ++   D IS ++M+ GY   G+
Sbjct: 232 -----------------NVMINGLAKGGNLGDARKLFDEMSERDEISWSSMVDGYISAGR 274

Query: 292 TESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTA 351
            + +L +F+Q+     R     +  ++      G +     +H++  ++ I  ++ + TA
Sbjct: 275 YKEALEIFQQMQREETRPGRFILSSVLAACSNIGAIDQGRWVHAYLKRNSIKLDAVLGTA 334

Query: 352 LSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPN 411
           L  +Y++   ++   ++F+E  E+ + +WNAMI G   +G  E+A+ LF ++Q  ++ PN
Sbjct: 335 LLDMYAKCGRLDMGWEVFEEMKEREIFTWNAMIGGLAIHGRAEDALELFSKLQEGRMKPN 394

Query: 412 PVTVSSILSACAQLGAISLGKWVHELVKS-RNFESNIYVSTALIDMYAKCGNIVEARELF 470
            +T+  +L+ACA  G +  G  + + ++     +  +     ++D+  + G   EA +L 
Sbjct: 395 GITLVGVLTACAHAGFVDKGLRIFQTMREFYGVDPELEHYGCMVDLLGRSGLFSEAEDLI 454

Query: 471 DLMSHK-SEVTWNTMISGYGLHGH 493
           + M  K +   W  ++    +HG+
Sbjct: 455 NSMPMKPNAAVWGALLGACRIHGN 478



 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 101/375 (26%), Positives = 165/375 (44%), Gaps = 47/375 (12%)

Query: 223 VQELRLGMEIQCLGLKLG-FHDHVYVLTGLVSFYSKC--GEVERAELLFRDIVRPDLISC 279
           +  L+   ++  L L+ G F DH YV   L+  Y+       + A  +F  I  P++   
Sbjct: 43  ITSLQYLTQLHGLVLRSGHFQDH-YVSGALLKCYANPHFSNFDFALKVFSSIPNPNVFIW 101

Query: 280 NAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLK 339
           N +I G   N K   ++  + +++  A R N  T   L         +     IH   +K
Sbjct: 102 NIVIKGCLENNKLFKAIYFYGRMVIDA-RPNKFTYPTLFKACSVAQAVQEGRQIHGHVVK 160

Query: 340 SGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISL 399
            GI S+  + +A   +Y+    +E ARK+F  S E  +  WN MI GY + G+ E A  L
Sbjct: 161 HGIGSDVHIKSAGIHMYASFGRLEDARKMF-YSGESDVVCWNTMIDGYLKCGVLEAAKGL 219

Query: 400 FQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAK 459
           F +M        PV               ++G W                   +I+  AK
Sbjct: 220 FAQM--------PVK--------------NIGSW-----------------NVMINGLAK 240

Query: 460 CGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSV 519
            GN+ +AR+LFD MS + E++W++M+ GY   G   EAL++F +M     RP      SV
Sbjct: 241 GGNLGDARKLFDEMSERDEISWSSMVDGYISAGRYKEALEIFQQMQREETRPGRFILSSV 300

Query: 520 LYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEP 579
           L ACS+ G + +G  +  + +  +  K  A     ++D+  + G+L+   E  + +  E 
Sbjct: 301 LAACSNIGAIDQGRWV-HAYLKRNSIKLDAVLGTALLDMYAKCGRLDMGWEVFEEMK-ER 358

Query: 580 GPAVWGALLGACMIH 594
               W A++G   IH
Sbjct: 359 EIFTWNAMIGGLAIH 373



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 68/301 (22%), Positives = 129/301 (42%), Gaps = 7/301 (2%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           AR LF  + + D   ++ ++ G+ +    K ++  +  +++     P  F  S VL+A S
Sbjct: 247 ARKLFDEMSERDEISWSSMVDGYISAGRYKEALEIFQQMQREET-RPGRFILSSVLAACS 305

Query: 120 ACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNS 179
                  G  +H +   +    D  +G AL+D+Y K   +    +VF++M E++   WN+
Sbjct: 306 NIGAIDQGRWVHAYLKRNSIKLDAVLGTALLDMYAKCGRLDMGWEVFEEMKEREIFTWNA 365

Query: 180 MISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEI-QCLGLK 238
           MI GL  +   +D++ +F  + + G    +  ++  VL A A    +  G+ I Q +   
Sbjct: 366 MIGGLAIHGRAEDALELFSKL-QEGRMKPNGITLVGVLTACAHAGFVDKGLRIFQTMREF 424

Query: 239 LGFHDHVYVLTGLVSFYSKCGEVERAELLFRDI-VRPDLISCNAMISGYTCNGKTESSLR 297
            G    +     +V    + G    AE L   + ++P+     A++     +G  + + R
Sbjct: 425 YGVDPELEHYGCMVDLLGRSGLFSEAEDLINSMPMKPNAAVWGALLGACRIHGNFDLAER 484

Query: 298 LFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGI--VSNSSVLTALSTV 355
           + + LL   E  NS   V L  ++   G     + I       GI  V   S++    TV
Sbjct: 485 VGKILL-ELEPQNSGRYVLLSNIYAKVGRFDDVSKIRKLMKDRGIKTVPGVSIVDLNGTV 543

Query: 356 Y 356
           +
Sbjct: 544 H 544


>gi|359478499|ref|XP_003632122.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Vitis vinifera]
          Length = 577

 Score =  460 bits (1183), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 236/586 (40%), Positives = 357/586 (60%), Gaps = 10/586 (1%)

Query: 200 MVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCG 259
           M+RN       TS + +L + A   E +LG    C  +K+GF   + + TGL+ FY+K G
Sbjct: 1   MLRND-VLPSKTSFSLILRSCAISGEAQLGEAFHCQIMKMGFEYDMILQTGLLDFYAKVG 59

Query: 260 EVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIP 319
           +++ A+ +F  + R D+++ NAMIS  + +G  E +  LF  +    ER NS +   +I 
Sbjct: 60  DLKCAKRVFMGMPRRDVVANNAMISALSKHGYVEEARNLFDNM---TER-NSCSWNSMIT 115

Query: 320 VFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFD-ESSEKSLA 378
            +   G ++    +        +VS ++++      Y +  ++ AA++LF    S ++  
Sbjct: 116 CYCKLGDINSARLMFDCNPVKDVVSWNAIIDG----YCKSKQLVAAQELFLLMGSARNSV 171

Query: 379 SWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELV 438
           +WN MI+ Y Q G    AIS+FQ+MQ+  V P  VT+ S+LSACA LGA+ +G+W+H  +
Sbjct: 172 TWNTMISAYVQCGEFGTAISMFQQMQSENVKPTEVTMVSLLSACAHLGALDMGEWIHGYI 231

Query: 439 KSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEAL 498
           +++  + ++ +  ALIDMY KCG +  A ++F  +S K+   WN++I G G++G G EA+
Sbjct: 232 RTKRLKIDVVLGNALIDMYCKCGALEAAIDVFHGLSRKNIFCWNSIIVGLGMNGRGEEAI 291

Query: 499 QLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDI 558
             F  M   GI+P GVTF+ +L  CSH+GL+  G   F  M+  +G +P  EHY CMVD+
Sbjct: 292 AAFIVMEKEGIKPDGVTFVGILSGCSHSGLLSAGQRYFSEMLGVYGLEPGVEHYGCMVDL 351

Query: 559 LGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYH 618
           LGRAG L++ALE I+ + ++P   V G+LL AC IHKDT L    +++L ELDP + G +
Sbjct: 352 LGRAGYLKEALELIRAMPMKPNSMVLGSLLRACQIHKDTKLGEQVTQQLLELDPCDGGNY 411

Query: 619 VLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIY 678
           V LSN+Y++   +    T R+++ KR + K PGC+ IEV    H F +GD  HPQ T I 
Sbjct: 412 VFLSNLYASLSRWDDVNTCRKLMIKRGVHKTPGCSSIEVNNIVHEFVAGDTSHPQFTQIN 471

Query: 679 AMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRII 738
           A L+++  +++  G    T   LHD+EEEEKE  ++ HSE++A+AFGL++T PG  IR++
Sbjct: 472 AFLDEIAKELKGQGHVPNTANVLHDIEEEEKEGAIRYHSERIAVAFGLMSTPPGKTIRVV 531

Query: 739 KNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           KNLR C DCH+A K IS    R I+VRD  RFHHF+ G CSC DYW
Sbjct: 532 KNLRTCSDCHSAMKLISNAFKREIIVRDRKRFHHFRNGSCSCNDYW 577



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 107/422 (25%), Positives = 195/422 (46%), Gaps = 15/422 (3%)

Query: 106 PDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKV 165
           P   ++S +L + +   +  +G   H   +  G+  D+ +   L+D Y K   +K A++V
Sbjct: 8   PSKTSFSLILRSCAISGEAQLGEAFHCQIMKMGFEYDMILQTGLLDFYAKVGDLKCAKRV 67

Query: 166 FDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMV-RNGGTWLDSTSVAAVLPAVAEVQ 224
           F  MP +D V  N+MIS L K+   +++  +F +M  RN  +W    S+      + ++ 
Sbjct: 68  FMGMPRRDVVANNAMISALSKHGYVEEARNLFDNMTERNSCSW---NSMITCYCKLGDIN 124

Query: 225 ELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRP-DLISCNAMI 283
             RL  +  C  +K      V     ++  Y K  ++  A+ LF  +    + ++ N MI
Sbjct: 125 SARLMFD--CNPVK-----DVVSWNAIIDGYCKSKQLVAAQELFLLMGSARNSVTWNTMI 177

Query: 284 SGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIV 343
           S Y   G+  +++ +F+Q+ +   +    T+V L+      G L +   IH +     + 
Sbjct: 178 SAYVQCGEFGTAISMFQQMQSENVKPTEVTMVSLLSACAHLGALDMGEWIHGYIRTKRLK 237

Query: 344 SNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEM 403
            +  +  AL  +Y +   +EAA  +F   S K++  WN++I G   NG  EEAI+ F  M
Sbjct: 238 IDVVLGNALIDMYCKCGALEAAIDVFHGLSRKNIFCWNSIIVGLGMNGRGEEAIAAFIVM 297

Query: 404 QASKVAPNPVTVSSILSACAQLGAISLG-KWVHELVKSRNFESNIYVSTALIDMYAKCGN 462
           +   + P+ VT   ILS C+  G +S G ++  E++     E  +     ++D+  + G 
Sbjct: 298 EKEGIKPDGVTFVGILSGCSHSGLLSAGQRYFSEMLGVYGLEPGVEHYGCMVDLLGRAGY 357

Query: 463 IVEARELFDLMSHK-SEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSG-VTFLSVL 520
           + EA EL   M  K + +   +++    +H       Q+  ++L       G   FLS L
Sbjct: 358 LKEALELIRAMPMKPNSMVLGSLLRACQIHKDTKLGEQVTQQLLELDPCDGGNYVFLSNL 417

Query: 521 YA 522
           YA
Sbjct: 418 YA 419


>gi|308080264|ref|NP_001183681.1| uncharacterized protein LOC100502275 [Zea mays]
 gi|238013832|gb|ACR37951.1| unknown [Zea mays]
 gi|413938826|gb|AFW73377.1| hypothetical protein ZEAMMB73_579690 [Zea mays]
          Length = 745

 Score =  460 bits (1183), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 243/675 (36%), Positives = 373/675 (55%), Gaps = 32/675 (4%)

Query: 142 DLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMV 201
           +LF   AL+        +     +F  M ++DTV +N++I+G         ++ ++  ++
Sbjct: 71  NLFTYNALLSTLAHARLLDDMDSLFASMAQRDTVSYNAVIAGFSGGGAHARAVRLYHTLL 130

Query: 202 RNGGTWLDS-TSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSK--- 257
           R G +   S  +++A++ A + + +  LG +  C  L+LGF  + +V + LV  Y+K   
Sbjct: 131 RAGSSVRPSRITMSAMVMAASALGDRALGRQFHCQILRLGFGVNAFVGSPLVGMYAKMGL 190

Query: 258 ----------------------------CGEVERAELLFRDIVRPDLISCNAMISGYTCN 289
                                       C  VE A  LF  +   D I+   M++G+T N
Sbjct: 191 IGDAKRVFDEMDGKNVVMYNTMITGLLRCKMVEEARRLFEVMTDRDCITWTTMVTGFTQN 250

Query: 290 GKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVL 349
           G    +L  FR++      ++  T   ++        L     IH++ +++    N  V 
Sbjct: 251 GLESQALNFFRRMRFQGIAIDQYTFGSILTACGALSALEQGKQIHAYIIRTHYDDNVFVG 310

Query: 350 TALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVA 409
           +AL  +YS+   ++ A   F   S K++ SW A+I GY QNG +EEA+ +F EMQ   + 
Sbjct: 311 SALVDMYSKCRSIKPAETAFRRMSCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDGID 370

Query: 410 PNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEAREL 469
           P+  T+ S++S+CA L ++  G   H L         I VS AL+ +Y KCG+I +A  L
Sbjct: 371 PDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRL 430

Query: 470 FDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLV 529
           FD M    +V+W  +++GY   G   E + LF +ML   ++P GVTF+ VL ACS AG V
Sbjct: 431 FDEMLFHDQVSWTALVTGYAQFGRAKETIDLFEKMLAKDVKPDGVTFIGVLSACSRAGFV 490

Query: 530 REGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLG 589
            +G   F SM  DHG  P+ +HY CM+D+  R+G+L++A EFIK + + P    WG LL 
Sbjct: 491 EKGCSYFHSMQKDHGIVPIDDHYTCMIDLYSRSGRLKEAEEFIKQMPMHPDAIGWGTLLS 550

Query: 590 ACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKA 649
           AC +  D  + + A+E L E+DP+N   +VLL ++++ + ++ Q A +R+ ++ R++ K 
Sbjct: 551 ACRLRGDMEIGQWAAENLLEIDPQNPASYVLLCSMHATKGNWNQVAQLRRGMRDRQVKKE 610

Query: 650 PGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEK 709
           PGC+ I+     H+F++ DQ HP S  IY  LE LN KM E G++ +  + LHDV + +K
Sbjct: 611 PGCSWIKYKNKVHIFSADDQSHPFSKGIYEKLEWLNSKMLEEGYKPDVSSVLHDVADTDK 670

Query: 710 ELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANR 769
             M+  HSEKLAIAFGL+       IRI+KNLRVC+DCH ATK ISK+TGR I+VRDA R
Sbjct: 671 VHMVSHHSEKLAIAFGLMFVPHEMPIRIVKNLRVCVDCHNATKLISKITGRDILVRDAVR 730

Query: 770 FHHFKGGVCSCGDYW 784
           FH F  GVCSCGD+W
Sbjct: 731 FHKFSNGVCSCGDFW 745



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 138/464 (29%), Positives = 227/464 (48%), Gaps = 33/464 (7%)

Query: 62  ALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFY-THLRKNTALTPDNFTYSFVLSAASA 120
           +LF S+ + D   +N +I GFS       ++  Y T LR  +++ P   T S ++ AASA
Sbjct: 93  SLFASMAQRDTVSYNAVIAGFSGGGAHARAVRLYHTLLRAGSSVRPSRITMSAMVMAASA 152

Query: 121 CCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSM 180
             DR++G   H   +  G+G + FVG+ LV +Y K   +  A++VFD+M  K+ V++N+M
Sbjct: 153 LGDRALGRQFHCQILRLGFGVNAFVGSPLVGMYAKMGLIGDAKRVFDEMDGKNVVMYNTM 212

Query: 181 ISGLMKNCCFQDSIWVFGDMV-RNGGTW-----------------------------LDS 210
           I+GL++    +++  +F  M  R+  TW                             +D 
Sbjct: 213 ITGLLRCKMVEEARRLFEVMTDRDCITWTTMVTGFTQNGLESQALNFFRRMRFQGIAIDQ 272

Query: 211 TSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRD 270
            +  ++L A   +  L  G +I    ++  + D+V+V + LV  YSKC  ++ AE  FR 
Sbjct: 273 YTFGSILTACGALSALEQGKQIHAYIIRTHYDDNVFVGSALVDMYSKCRSIKPAETAFRR 332

Query: 271 IVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLT 330
           +   ++IS  A+I GY  NG +E ++R+F ++       +  T+  +I        L   
Sbjct: 333 MSCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDFTLGSVISSCANLASLEEG 392

Query: 331 NCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQN 390
              H   L SG++   +V  AL T+Y +   +E A +LFDE       SW A++ GY Q 
Sbjct: 393 AQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMLFHDQVSWTALVTGYAQF 452

Query: 391 GLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLG-KWVHELVKSRNFESNIYV 449
           G  +E I LF++M A  V P+ VT   +LSAC++ G +  G  + H + K          
Sbjct: 453 GRAKETIDLFEKMLAKDVKPDGVTFIGVLSACSRAGFVEKGCSYFHSMQKDHGIVPIDDH 512

Query: 450 STALIDMYAKCGNIVEARELFDLMS-HKSEVTWNTMISGYGLHG 492
            T +ID+Y++ G + EA E    M  H   + W T++S   L G
Sbjct: 513 YTCMIDLYSRSGRLKEAEEFIKQMPMHPDAIGWGTLLSACRLRG 556



 Score =  162 bits (410), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 101/360 (28%), Positives = 178/360 (49%), Gaps = 34/360 (9%)

Query: 242 HDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQ 301
           H +++    L+S  +    ++  + LF  + + D +S NA+I+G++  G    ++RL+  
Sbjct: 69  HPNLFTYNALLSTLAHARLLDDMDSLFASMAQRDTVSYNAVIAGFSGGGAHARAVRLYHT 128

Query: 302 LLASAERVNSS--TIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRL 359
           LL +   V  S  T+  ++      G   L    H   L+ G   N+ V + L  +Y+++
Sbjct: 129 LLRAGSSVRPSRITMSAMVMAASALGDRALGRQFHCQILRLGFGVNAFVGSPLVGMYAKM 188

Query: 360 ----------NEM---------------------EAARKLFDESSEKSLASWNAMIAGYT 388
                     +EM                     E AR+LF+  +++   +W  M+ G+T
Sbjct: 189 GLIGDAKRVFDEMDGKNVVMYNTMITGLLRCKMVEEARRLFEVMTDRDCITWTTMVTGFT 248

Query: 389 QNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIY 448
           QNGL  +A++ F+ M+   +A +  T  SIL+AC  L A+  GK +H  +   +++ N++
Sbjct: 249 QNGLESQALNFFRRMRFQGIAIDQYTFGSILTACGALSALEQGKQIHAYIIRTHYDDNVF 308

Query: 449 VSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSG 508
           V +AL+DMY+KC +I  A   F  MS K+ ++W  +I GYG +G   EA+++FSEM   G
Sbjct: 309 VGSALVDMYSKCRSIKPAETAFRRMSCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDG 368

Query: 509 IRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKA 568
           I P   T  SV+ +C++   + EG + F  +    G          +V + G+ G +E A
Sbjct: 369 IDPDDFTLGSVISSCANLASLEEGAQ-FHCLALVSGLMHYITVSNALVTLYGKCGSIEDA 427


>gi|449527343|ref|XP_004170671.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g24000, mitochondrial-like [Cucumis sativus]
          Length = 677

 Score =  459 bits (1182), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 235/586 (40%), Positives = 359/586 (61%), Gaps = 2/586 (0%)

Query: 199 DMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKC 258
           D++  G    + T  + +L     +++L+ G  I        F D + +L  +++ Y+KC
Sbjct: 94  DLINCGSLEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKC 153

Query: 259 GEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLI 318
           G +E A+ LF  +   D++S   +ISGY+ +G+   +L LF ++L    + N  T+  L+
Sbjct: 154 GSLEEAQDLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLL 213

Query: 319 PVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLA 378
                    H    +H+F LK G   N  V ++L  +Y+R   M  A+ +F+  + K++ 
Sbjct: 214 KASGTGPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVV 273

Query: 379 SWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELV 438
           SWNA+IAG+ + G  E  + LF +M      P   T SS+L ACA  G++  GKWVH  V
Sbjct: 274 SWNALIAGHARKGEGEHVMRLFXQMLRQGFEPTHFTYSSVL-ACASSGSLEQGKWVHAHV 332

Query: 439 KSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEAL 498
                +   Y+   LIDMYAK G+I +A+++F  +  +  V+WN++ISGY  HG G EAL
Sbjct: 333 IKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEAL 392

Query: 499 QLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDI 558
           QLF +ML + ++P+ +TFLSVL ACSH+GL+ EG   F+ ++  H  +    H+  +VD+
Sbjct: 393 QLFEQMLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFE-LMKKHKIEAQVAHHVTVVDL 451

Query: 559 LGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYH 618
           LGRAG+L +A +FI+ + ++P  AVWGALLGAC +HK+ +L   A+E++FELDP + G H
Sbjct: 452 LGRAGRLNEANKFIEEMPIKPTAAVWGALLGACRMHKNMDLGVYAAEQIFELDPHDSGPH 511

Query: 619 VLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIY 678
           VLLSNIY++      AA VR+++K+  + K P C+ +E+    HVF + D  HP    I 
Sbjct: 512 VLLSNIYASAGRLSDAAKVRKMMKESGVKKEPACSWVEIENEVHVFVANDDSHPMREEIQ 571

Query: 679 AMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRII 738
            M EK++GK++E G+  +T   L  + ++++EL ++ HSEKLA+AF ++ T PG  IRI 
Sbjct: 572 RMWEKISGKIKEIGYVPDTSHVLFFMNQQDRELKLQYHSEKLALAFAVLKTPPGLTIRIK 631

Query: 739 KNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           KN+R+C DCH+A KF S+V GR I+VRD NRFHHF  G+CSC DYW
Sbjct: 632 KNIRICGDCHSAFKFASRVLGREIIVRDTNRFHHFLHGMCSCRDYW 677



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 102/390 (26%), Positives = 201/390 (51%), Gaps = 3/390 (0%)

Query: 103 ALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSA 162
           +L P+   YS +L+  +       G  +H H   S +  DL +   ++++Y K   ++ A
Sbjct: 100 SLEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEA 159

Query: 163 RKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAE 222
           + +FDKMP KD V W  +ISG  ++    +++ +F  M+  G    +  +++++L A   
Sbjct: 160 QDLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQ-PNEFTLSSLLKASGT 218

Query: 223 VQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAM 282
                 G ++    LK G+  +V+V + L+  Y++   +  A+++F  +   +++S NA+
Sbjct: 219 GPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNAL 278

Query: 283 ISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGI 342
           I+G+   G+ E  +RLF Q+L         T   ++      G L     +H+  +KSG 
Sbjct: 279 IAGHARKGEGEHVMRLFXQMLRQGFEPTHFTYSSVLACASS-GSLEQGKWVHAHVIKSGG 337

Query: 343 VSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQE 402
              + +   L  +Y++   ++ A+K+F    ++ + SWN++I+GY Q+GL  EA+ LF++
Sbjct: 338 QPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQ 397

Query: 403 MQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGN 462
           M  +KV PN +T  S+L+AC+  G +  G++  EL+K    E+ +     ++D+  + G 
Sbjct: 398 MLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFELMKKHKIEAQVAHHVTVVDLLGRAGR 457

Query: 463 IVEARELFDLMSHK-SEVTWNTMISGYGLH 491
           + EA +  + M  K +   W  ++    +H
Sbjct: 458 LNEANKFIEEMPIKPTAAVWGALLGACRMH 487



 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 113/473 (23%), Positives = 213/473 (45%), Gaps = 51/473 (10%)

Query: 9   RNLFLSLLKGAKTQSQLTQ---THAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFF 65
           R L+  +L       +L Q    HA I    F++DL  +  + +  +   +   A+ LF 
Sbjct: 105 RTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQDLFD 164

Query: 66  SIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRS 125
            +P  D+  + V+I G+S +     ++  +  +  +    P+ FT S +L A+       
Sbjct: 165 KMPTKDMVSWTVLISGYSQSGQASEALALFPKML-HLGFQPNEFTLSSLLKASGTGPSDH 223

Query: 126 IGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLM 185
            G  LH  ++  GY  ++ VG++L+D+Y +++ ++ A+ +F+ +  K+ V WN++I+G  
Sbjct: 224 HGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGHA 283

Query: 186 KNCCFQDSIWVFGDMVRNGGTWLDST--SVAAVLPAVAEVQELRLGMEIQCLGLKLGFHD 243
           +    +  + +F  M+R G    + T  + ++VL A A    L  G  +    +K G   
Sbjct: 284 RKGEGEHVMRLFXQMLRQG---FEPTHFTYSSVL-ACASSGSLEQGKWVHAHVIKSGGQP 339

Query: 244 HVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLL 303
             Y+   L+  Y+K G ++ A+ +FR +V+ D++S N++ISGY  +G    +L+LF Q+L
Sbjct: 340 IAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQML 399

Query: 304 ASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEME 363
            +  + N  T + +           LT C HS  L  G                   E+ 
Sbjct: 400 KAKVQPNEITFLSV-----------LTACSHSGLLDEG---------------QYYFELM 433

Query: 364 AARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACA 423
              K+     E  +A    ++    + G   EA    +EM    + P      ++L AC 
Sbjct: 434 KKHKI-----EAQVAHHVTVVDLLGRAGRLNEANKFIEEM---PIKPTAAVWGALLGACR 485

Query: 424 QLGAISLGKWVHELVKSRNFESNIYVS---TALIDMYAKCGNIVEARELFDLM 473
               + LG +  E +    FE + + S     L ++YA  G + +A ++  +M
Sbjct: 486 MHKNMDLGVYAAEQI----FELDPHDSGPHVLLSNIYASAGRLSDAAKVRKMM 534


>gi|113205417|gb|AAU90328.2| Pentatricopeptide repeat domain containing protein, putative
           [Solanum demissum]
          Length = 819

 Score =  459 bits (1182), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 252/726 (34%), Positives = 407/726 (56%), Gaps = 3/726 (0%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           AR LF S+   +   + ++I G+S N  PK +   YT + + + + PD+ T++ +LS   
Sbjct: 96  ARELFESMFSRNEVSWTIMIGGYSQNNQPKEAFNLYTEMCR-SGVKPDHITFATLLSGFD 154

Query: 120 ACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNS 179
                   + +H H I  G+ + L V  +LVD Y K   +  A ++F +MP KD+V +N 
Sbjct: 155 DTTTLKEVLQIHSHIIRFGFSASLIVFNSLVDSYCKTCCLDIASQLFSEMPTKDSVSFNV 214

Query: 180 MISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKL 239
           MI+G  K    ++++ +F  M RN        + AA+L      +++  G +I  L +K 
Sbjct: 215 MITGYTKYGFREEALKLFMQM-RNMDFQPSGFTFAAMLGMSVGSEDVIFGQQIHGLAIKT 273

Query: 240 GFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLF 299
            +   ++V   L+ FYSK   ++ A+ LF ++   D +S N +I+GY  NG+ E S  LF
Sbjct: 274 SYVWDIFVANALLDFYSKHDYIDLAKNLFDEMPELDGVSYNIIITGYAWNGQYEKSFDLF 333

Query: 300 RQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRL 359
           ++L  ++    +     ++ V     +L +    H+  + +  VS   V  AL  +Y++ 
Sbjct: 334 KRLQGTSFDRKNFPFATMLSVAAIELNLSMGRQTHAQAVVTTAVSEVQVGNALVDMYAKC 393

Query: 360 NEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSIL 419
            + E A ++F   + ++   W A+I+ Y Q G  EEA+ +F+EM    V  +  T +S L
Sbjct: 394 EKFEDANRIFANLAYRNSVPWTAIISIYVQKGFHEEALKMFKEMNRENVHGDQATFASTL 453

Query: 420 SACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEV 479
            A A L ++SLGK +H  V      S+++  + L+DMYA CG++ +A E+F  M  ++ V
Sbjct: 454 KASANLASVSLGKQLHSSVIRLGLLSSVFSGSVLVDMYANCGSMKDAIEVFKEMPDRNIV 513

Query: 480 TWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSM 539
            WN +IS Y  +G        F++M+ SG+ P  V+FLSVL ACSH GLV +    F SM
Sbjct: 514 CWNALISAYSQNGDAEATFSSFADMIESGLYPDSVSFLSVLTACSHRGLVEKALWYFNSM 573

Query: 540 IHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNL 599
              +   P  +HYA M+D+L R+G+  +A   I  +  EP   +W ++L +C IHK+ +L
Sbjct: 574 TQVYKLDPRRKHYATMIDVLCRSGRFNEAENLISEMPFEPDEVMWSSVLNSCRIHKNQDL 633

Query: 600 ARVASEKLFELDP-ENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVG 658
           A+ A+++LF++D   +   +V +SNIY+    +  AA V++ +++R + K    + +E+ 
Sbjct: 634 AKKAADQLFKMDALRDAAAYVNMSNIYAEAGKWENAAKVKKAMRERGVKKVTAYSWVEID 693

Query: 659 GTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSE 718
              HVFT+ D+ HPQ+  I   +  L   M + G++ +T   L +V+EE K   +K HSE
Sbjct: 694 HRVHVFTANDRTHPQTEQIRRKINSLVELMDKEGYKPDTSCTLQNVDEEMKIESLKYHSE 753

Query: 719 KLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVC 778
           +LAIAF LI T  G+ I I+KNLR C+DCH A K ISK+ GR I VRD++RFHHF+ G C
Sbjct: 754 RLAIAFALINTPEGSPIIIMKNLRACVDCHAAIKVISKIVGREITVRDSSRFHHFRDGSC 813

Query: 779 SCGDYW 784
           SCGDYW
Sbjct: 814 SCGDYW 819



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 131/490 (26%), Positives = 232/490 (47%), Gaps = 17/490 (3%)

Query: 12  FLSLLKG---AKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATC---YARALFF 65
           F +LL G     T  ++ Q H+ II  GF   L     L   +  +  TC    A  LF 
Sbjct: 146 FATLLSGFDDTTTLKEVLQIHSHIIRFGFSASLIVFNSL---VDSYCKTCCLDIASQLFS 202

Query: 66  SIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRS 125
            +P  D   FNV+I G++     + ++  +  +R N    P  FT++ +L  +    D  
Sbjct: 203 EMPTKDSVSFNVMITGYTKYGFREEALKLFMQMR-NMDFQPSGFTFAAMLGMSVGSEDVI 261

Query: 126 IGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLM 185
            G  +HG AI + Y  D+FV  AL+D Y K  ++  A+ +FD+MPE D V +N +I+G  
Sbjct: 262 FGQQIHGLAIKTSYVWDIFVANALLDFYSKHDYIDLAKNLFDEMPELDGVSYNIIITGYA 321

Query: 186 KNCCFQDSIWVFGDMVRNGGTWLDSTSVA-AVLPAVAEVQ-ELRLGMEIQCLGLKLGFHD 243
            N  ++ S  +F    R  GT  D  +   A + +VA ++  L +G +     +      
Sbjct: 322 WNGQYEKSFDLFK---RLQGTSFDRKNFPFATMLSVAAIELNLSMGRQTHAQAVVTTAVS 378

Query: 244 HVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLL 303
            V V   LV  Y+KC + E A  +F ++   + +   A+IS Y   G  E +L++F+++ 
Sbjct: 379 EVQVGNALVDMYAKCEKFEDANRIFANLAYRNSVPWTAIISIYVQKGFHEEALKMFKEMN 438

Query: 304 ASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEME 363
                 + +T    +        + L   +HS  ++ G++S+    + L  +Y+    M+
Sbjct: 439 RENVHGDQATFASTLKASANLASVSLGKQLHSSVIRLGLLSSVFSGSVLVDMYANCGSMK 498

Query: 364 AARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACA 423
            A ++F E  ++++  WNA+I+ Y+QNG  E   S F +M  S + P+ V+  S+L+AC+
Sbjct: 499 DAIEVFKEMPDRNIVCWNALISAYSQNGDAEATFSSFADMIESGLYPDSVSFLSVLTACS 558

Query: 424 QLGAISLGKW-VHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHK-SEVTW 481
             G +    W  + + +    +        +ID+  + G   EA  L   M  +  EV W
Sbjct: 559 HRGLVEKALWYFNSMTQVYKLDPRRKHYATMIDVLCRSGRFNEAENLISEMPFEPDEVMW 618

Query: 482 NTMISGYGLH 491
           +++++   +H
Sbjct: 619 SSVLNSCRIH 628



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 128/476 (26%), Positives = 223/476 (46%), Gaps = 5/476 (1%)

Query: 149 LVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWL 208
           +V  Y K   +  AR++F+ M  ++ V W  MI G  +N   +++  ++ +M R+ G   
Sbjct: 83  MVSGYVKSRNLFRARELFESMFSRNEVSWTIMIGGYSQNNQPKEAFNLYTEMCRS-GVKP 141

Query: 209 DSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLF 268
           D  + A +L    +   L+  ++I    ++ GF   + V   LV  Y K   ++ A  LF
Sbjct: 142 DHITFATLLSGFDDTTTLKEVLQIHSHIIRFGFSASLIVFNSLVDSYCKTCCLDIASQLF 201

Query: 269 RDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLH 328
            ++   D +S N MI+GYT  G  E +L+LF Q+     + +  T   ++ +      + 
Sbjct: 202 SEMPTKDSVSFNVMITGYTKYGFREEALKLFMQMRNMDFQPSGFTFAAMLGMSVGSEDVI 261

Query: 329 LTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYT 388
               IH   +K+  V +  V  AL   YS+ + ++ A+ LFDE  E    S+N +I GY 
Sbjct: 262 FGQQIHGLAIKTSYVWDIFVANALLDFYSKHDYIDLAKNLFDEMPELDGVSYNIIITGYA 321

Query: 389 QNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIY 448
            NG  E++  LF+ +Q +         +++LS  A    +S+G+  H         S + 
Sbjct: 322 WNGQYEKSFDLFKRLQGTSFDRKNFPFATMLSVAAIELNLSMGRQTHAQAVVTTAVSEVQ 381

Query: 449 VSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSG 508
           V  AL+DMYAKC    +A  +F  +++++ V W  +IS Y   G   EAL++F EM    
Sbjct: 382 VGNALVDMYAKCEKFEDANRIFANLAYRNSVPWTAIISIYVQKGFHEEALKMFKEMNREN 441

Query: 509 IRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKA 568
           +     TF S L A ++   V  G ++  S+I   G        + +VD+    G ++ A
Sbjct: 442 VHGDQATFASTLKASANLASVSLGKQLHSSVIR-LGLLSSVFSGSVLVDMYANCGSMKDA 500

Query: 569 LEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFE--LDPENVGYHVLLS 622
           +E  K +  +     W AL+ A   + D      +   + E  L P++V +  +L+
Sbjct: 501 IEVFKEMP-DRNIVCWNALISAYSQNGDAEATFSSFADMIESGLYPDSVSFLSVLT 555



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 91/346 (26%), Positives = 156/346 (45%), Gaps = 50/346 (14%)

Query: 345 NSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQ 404
           N+S +  + + Y +   +  AR+LF+    ++  SW  MI GY+QN   +EA +L+ EM 
Sbjct: 76  NTSSVNMMVSGYVKSRNLFRARELFESMFSRNEVSWTIMIGGYSQNNQPKEAFNLYTEMC 135

Query: 405 ASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIV 464
            S V P+ +T +++LS       +     +H  +    F +++ V  +L+D Y K   + 
Sbjct: 136 RSGVKPDHITFATLLSGFDDTTTLKEVLQIHSHIIRFGFSASLIVFNSLVDSYCKTCCLD 195

Query: 465 EARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACS 524
            A +LF  M  K  V++N MI+GY  +G   EAL+LF +M +   +PSG TF ++L    
Sbjct: 196 IASQLFSEMPTKDSVSFNVMITGYTKYGFREEALKLFMQMRNMDFQPSGFTFAAML---- 251

Query: 525 HAGL-VREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAV 583
             G+ V   D IF   IH                                GLA++    V
Sbjct: 252 --GMSVGSEDVIFGQQIH--------------------------------GLAIKTS-YV 276

Query: 584 W-----GALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVR 638
           W      ALL     H   +LA+   +++ ELD   V Y+++++  Y+    Y ++  + 
Sbjct: 277 WDIFVANALLDFYSKHDYIDLAKNLFDEMPELD--GVSYNIIITG-YAWNGQYEKSFDLF 333

Query: 639 QVVKKRKLAKA--PGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLE 682
           + ++     +   P  T++ V       + G Q H Q+    A+ E
Sbjct: 334 KRLQGTSFDRKNFPFATMLSVAAIELNLSMGRQTHAQAVVTTAVSE 379


>gi|224079057|ref|XP_002305733.1| predicted protein [Populus trichocarpa]
 gi|222848697|gb|EEE86244.1| predicted protein [Populus trichocarpa]
          Length = 571

 Score =  459 bits (1181), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 233/572 (40%), Positives = 342/572 (59%), Gaps = 1/572 (0%)

Query: 213 VAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIV 272
           + ++L A A   ++ LG  +   G+K   H        L+  Y+KCG ++ A L+F  + 
Sbjct: 1   MVSILQACANCGDVSLGRAVHGSGVKACVHWKTTFCNTLLDMYAKCGVLDGAILVFDLMS 60

Query: 273 RPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNC 332
              +++  ++I+ Y   G ++ ++RLF ++       +  TI  ++      G L     
Sbjct: 61  VRTVVTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLENGKD 120

Query: 333 IHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGL 392
           +H++  ++ + SN  V  AL  +Y++   ME A  +F E   K + SWN MI GY++N L
Sbjct: 121 VHNYIRENDMQSNIFVCNALMDMYAKCGSMEDANSVFLEMPVKDIISWNTMIGGYSKNSL 180

Query: 393 TEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTA 452
             EA+SLF +M   ++ P+  T++ IL ACA L ++  GK VH  +    F S+  V+ A
Sbjct: 181 PNEALSLFGDM-VLEMKPDGTTLACILPACASLASLDRGKEVHGHILRNGFFSDQQVANA 239

Query: 453 LIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPS 512
           L+DMY KCG  V AR LFD++  K  +TW  MI+GYG+HG G  A+  F+EM  +GI P 
Sbjct: 240 LVDMYVKCGVPVLARLLFDMIPTKDLITWTVMIAGYGMHGFGNNAITTFNEMRQAGIEPD 299

Query: 513 GVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFI 572
            V+F+S+LYACSH+GL+ EG   F  M  +   KP  EHYAC+VD+L R+G+L  A +FI
Sbjct: 300 EVSFISILYACSHSGLLDEGWRFFNVMQDECNVKPKLEHYACIVDLLARSGKLAMAYKFI 359

Query: 573 KGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYL 632
           K + +EP   +WGALL  C IH D  LA   +E +FEL+PEN GY+VLL+N Y+    + 
Sbjct: 360 KSMPIEPDATIWGALLSGCRIHHDVKLAEKVAEHVFELEPENTGYYVLLANTYAEAEKWE 419

Query: 633 QAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAG 692
           +   +RQ + +R L K PGC+ IEV    H+F +G+  HPQ+  I  +L++L  KM+E G
Sbjct: 420 EVKKLRQKIGRRGLKKNPGCSWIEVKSKVHIFLAGNSSHPQAKKIEVLLKRLRSKMKEEG 479

Query: 693 FQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATK 752
           +  +T  AL + +  +KE  +  HSEKLA+AFG++   P   IR+ KNLRVC DCH   K
Sbjct: 480 YFPKTRYALINADSLQKETALCGHSEKLAMAFGILNLPPARTIRVSKNLRVCGDCHEMAK 539

Query: 753 FISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           FISK  GR IV+RD+NRFHHFK GVC C  +W
Sbjct: 540 FISKTLGREIVLRDSNRFHHFKDGVCCCRGFW 571



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 104/380 (27%), Positives = 180/380 (47%), Gaps = 4/380 (1%)

Query: 114 VLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKD 173
           +L A + C D S+G  +HG  + +           L+D+Y K   +  A  VFD M  + 
Sbjct: 4   ILQACANCGDVSLGRAVHGSGVKACVHWKTTFCNTLLDMYAKCGVLDGAILVFDLMSVRT 63

Query: 174 TVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQ 233
            V W S+I+   +     ++I +F +M R G +  D  ++  VL A A    L  G ++ 
Sbjct: 64  VVTWTSLIAAYAREGLSDEAIRLFHEMDREGVS-PDIFTITTVLHACACNGSLENGKDVH 122

Query: 234 CLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTE 293
               +     +++V   L+  Y+KCG +E A  +F ++   D+IS N MI GY+ N    
Sbjct: 123 NYIRENDMQSNIFVCNALMDMYAKCGSMEDANSVFLEMPVKDIISWNTMIGGYSKNSLPN 182

Query: 294 SSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALS 353
            +L LF  ++    + + +T+  ++P       L     +H   L++G  S+  V  AL 
Sbjct: 183 EALSLFGDMVLEM-KPDGTTLACILPACASLASLDRGKEVHGHILRNGFFSDQQVANALV 241

Query: 354 TVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPV 413
            +Y +      AR LFD    K L +W  MIAGY  +G    AI+ F EM+ + + P+ V
Sbjct: 242 DMYVKCGVPVLARLLFDMIPTKDLITWTVMIAGYGMHGFGNNAITTFNEMRQAGIEPDEV 301

Query: 414 TVSSILSACAQLGAISLG-KWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDL 472
           +  SIL AC+  G +  G ++ + +    N +  +     ++D+ A+ G +  A +    
Sbjct: 302 SFISILYACSHSGLLDEGWRFFNVMQDECNVKPKLEHYACIVDLLARSGKLAMAYKFIKS 361

Query: 473 MSHKSEVT-WNTMISGYGLH 491
           M  + + T W  ++SG  +H
Sbjct: 362 MPIEPDATIWGALLSGCRIH 381



 Score =  112 bits (280), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 77/232 (33%), Positives = 116/232 (50%), Gaps = 9/232 (3%)

Query: 97  HLRKNTALTPDNFTYSFVLSAASACCDRSI--GVLLHGHAIVSGYGSDLFVGAALVDLYF 154
           H      ++PD FT + VL A +  C+ S+  G  +H +   +   S++FV  AL+D+Y 
Sbjct: 88  HEMDREGVSPDIFTITTVLHACA--CNGSLENGKDVHNYIRENDMQSNIFVCNALMDMYA 145

Query: 155 KFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVA 214
           K   ++ A  VF +MP KD + WN+MI G  KN    +++ +FGDMV       D T++A
Sbjct: 146 KCGSMEDANSVFLEMPVKDIISWNTMIGGYSKNSLPNEALSLFGDMVLEMKP--DGTTLA 203

Query: 215 AVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRP 274
            +LPA A +  L  G E+    L+ GF     V   LV  Y KCG    A LLF  I   
Sbjct: 204 CILPACASLASLDRGKEVHGHILRNGFFSDQQVANALVDMYVKCGVPVLARLLFDMIPTK 263

Query: 275 DLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGH 326
           DLI+   MI+GY  +G   +++  F ++  +    +    V  I + Y   H
Sbjct: 264 DLITWTVMIAGYGMHGFGNNAITTFNEMRQAGIEPDE---VSFISILYACSH 312


>gi|356529693|ref|XP_003533423.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65570-like [Glycine max]
          Length = 676

 Score =  459 bits (1180), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 248/681 (36%), Positives = 398/681 (58%), Gaps = 10/681 (1%)

Query: 108 NFTYSFVLSAASACCDRSIGVL--LHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKV 165
           NF  S +  +A     +S+  L  +H + I SG+ S  F+G  L+D Y K   +  ARK+
Sbjct: 2   NFYSSLIAQSAHT---KSLTTLRAVHTNVIKSGF-SYSFLGHKLIDGYIKCGSLAEARKL 57

Query: 166 FDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQE 225
           FD++P +  V WNSMIS  + +   ++++  +G+M+  G    D+ + +A+  A +++  
Sbjct: 58  FDELPSRHIVTWNSMISSHISHGKSKEAVEFYGNMLMEG-VLPDAYTFSAISKAFSQLGL 116

Query: 226 LRLGMEIQCLGLKLGFHD-HVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMIS 284
           +R G     L + LG      +V + LV  Y+K  ++  A L+FR ++  D++   A+I 
Sbjct: 117 IRHGQRAHGLAVVLGLEVLDGFVASALVDMYAKFDKMRDAHLVFRRVLEKDVVLFTALIV 176

Query: 285 GYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVS 344
           GY  +G    +L++F  ++    + N  T+  ++      G L     IH   +KSG+ S
Sbjct: 177 GYAQHGLDGEALKIFEDMVNRGVKPNEYTLACILINCGNLGDLVNGQLIHGLVVKSGLES 236

Query: 345 NSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQ 404
             +  T+L T+YSR N +E + K+F++    +  +W + + G  QNG  E A+S+F+EM 
Sbjct: 237 VVASQTSLLTMYSRCNMIEDSIKVFNQLDYANQVTWTSFVVGLVQNGREEVAVSIFREMI 296

Query: 405 ASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIV 464
              ++PNP T+SSIL AC+ L  + +G+ +H +      + N Y   ALI++Y KCGN+ 
Sbjct: 297 RCSISPNPFTLSSILQACSSLAMLEVGEQIHAITMKLGLDGNKYAGAALINLYGKCGNMD 356

Query: 465 EARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACS 524
           +AR +FD+++    V  N+MI  Y  +G G EAL+LF  + + G+ P+GVTF+S+L AC+
Sbjct: 357 KARSVFDVLTELDVVAINSMIYAYAQNGFGHEALELFERLKNMGLVPNGVTFISILLACN 416

Query: 525 HAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVW 584
           +AGLV EG +IF S+ ++H  +   +H+ CM+D+LGR+ +LE+A   I+ +   P   +W
Sbjct: 417 NAGLVEEGCQIFASIRNNHNIELTIDHFTCMIDLLGRSRRLEEAAMLIEEVR-NPDVVLW 475

Query: 585 GALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKR 644
             LL +C IH +  +A     K+ EL P + G H+LL+N+Y++   + Q   ++  ++  
Sbjct: 476 RTLLNSCKIHGEVEMAEKVMSKILELAPGDGGTHILLTNLYASAGKWNQVIEMKSTIRDL 535

Query: 645 KLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDV 704
           KL K+P  + ++V    H F +GD  HP+S  I+ ML  L  K++  G+   T   L D+
Sbjct: 536 KLKKSPAMSWVDVDREVHTFMAGDLSHPRSLEIFEMLHGLMKKVKTLGYNPNTRFVLQDL 595

Query: 705 EEEEKELMMKVHSEKLAIAFGLIAT-EPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIV 763
           +EE+K   +  HSEKLAIA+ L  T    T IRI KNLRVC DCH+  KF+S +TGR I+
Sbjct: 596 DEEKKISSLYYHSEKLAIAYALWKTIGRTTTIRIFKNLRVCGDCHSWIKFVSLLTGRDII 655

Query: 764 VRDANRFHHFKGGVCSCGDYW 784
            RD+ RFHHFKGG+CSC DYW
Sbjct: 656 ARDSKRFHHFKGGLCSCKDYW 676



 Score =  105 bits (263), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 85/383 (22%), Positives = 179/383 (46%), Gaps = 26/383 (6%)

Query: 27  QTHAQIIIHGFQN-DLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNN 85
           + H   ++ G +  D    + L    + F     A  +F  + + D+ LF  +I G++ +
Sbjct: 122 RAHGLAVVLGLEVLDGFVASALVDMYAKFDKMRDAHLVFRRVLEKDVVLFTALIVGYAQH 181

Query: 86  EMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFV 145
            +   ++  +  +  N  + P+ +T + +L       D   G L+HG  + SG  S +  
Sbjct: 182 GLDGEALKIFEDM-VNRGVKPNEYTLACILINCGNLGDLVNGQLIHGLVVKSGLESVVAS 240

Query: 146 GAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGG 205
             +L+ +Y + + ++ + KVF+++   + V W S + GL++N   + ++ +F +M+R   
Sbjct: 241 QTSLLTMYSRCNMIEDSIKVFNQLDYANQVTWTSFVVGLVQNGREEVAVSIFREMIRCSI 300

Query: 206 TWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAE 265
           +  +  +++++L A + +  L +G +I  + +KLG   + Y    L++ Y KCG +++A 
Sbjct: 301 S-PNPFTLSSILQACSSLAMLEVGEQIHAITMKLGLDGNKYAGAALINLYGKCGNMDKAR 359

Query: 266 LLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFG 325
            +F  +   D+++ N+MI  Y  NG    +L LF       ER+ +   +GL+P    F 
Sbjct: 360 SVFDVLTELDVVAINSMIYAYAQNGFGHEALELF-------ERLKN---MGLVPNGVTFI 409

Query: 326 HLHLTNCIHSFCLKSG------IVSNSSV------LTALSTVYSRLNEMEAARKLFDESS 373
            + L  C ++  ++ G      I +N ++       T +  +  R   +E A  L +E  
Sbjct: 410 SI-LLACNNAGLVEEGCQIFASIRNNHNIELTIDHFTCMIDLLGRSRRLEEAAMLIEEVR 468

Query: 374 EKSLASWNAMIAGYTQNGLTEEA 396
              +  W  ++     +G  E A
Sbjct: 469 NPDVVLWRTLLNSCKIHGEVEMA 491



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 58/283 (20%), Positives = 127/283 (44%), Gaps = 11/283 (3%)

Query: 29  HAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNEMP 88
           H  ++  G ++ +++ T L    S       +  +F  +   +   +   + G   N   
Sbjct: 226 HGLVVKSGLESVVASQTSLLTMYSRCNMIEDSIKVFNQLDYANQVTWTSFVVGLVQNGRE 285

Query: 89  KSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAA 148
           + ++  +  + +  +++P+ FT S +L A S+     +G  +H   +  G   + + GAA
Sbjct: 286 EVAVSIFREMIR-CSISPNPFTLSSILQACSSLAMLEVGEQIHAITMKLGLDGNKYAGAA 344

Query: 149 LVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWL 208
           L++LY K   +  AR VFD + E D V  NSMI    +N    +++ +F + ++N G   
Sbjct: 345 LINLYGKCGNMDKARSVFDVLTELDVVAINSMIYAYAQNGFGHEALELF-ERLKNMGLVP 403

Query: 209 DSTSVAAVLPAVAEVQELRLGMEI-----QCLGLKLGFHDHVYVLTGLVSFYSKCGEVER 263
           +  +  ++L A      +  G +I         ++L   DH    T ++    +   +E 
Sbjct: 404 NGVTFISILLACNNAGLVEEGCQIFASIRNNHNIELTI-DH---FTCMIDLLGRSRRLEE 459

Query: 264 AELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASA 306
           A +L  ++  PD++    +++    +G+ E + ++  ++L  A
Sbjct: 460 AAMLIEEVRNPDVVLWRTLLNSCKIHGEVEMAEKVMSKILELA 502


>gi|449526834|ref|XP_004170418.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g48910-like [Cucumis sativus]
          Length = 666

 Score =  459 bits (1180), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 246/657 (37%), Positives = 367/657 (55%), Gaps = 44/657 (6%)

Query: 130 LHGHAIVSGYGSDLFVGAALVDLYFK--FSWVKSARKVFDKMPEKDTVLWNSMISGLMKN 187
           LH   + SG+  D +V  AL+  Y    FS    A KVF  +P  +  +WN +I G ++N
Sbjct: 52  LHALVLRSGHFQDHYVSGALLKCYANPHFSNFDFALKVFSSIPNPNVFIWNIVIKGCLEN 111

Query: 188 CCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYV 247
                +I+ +G MV +     +  +   +  A +  Q ++ G +I    +K G    V++
Sbjct: 112 NKLFKAIYFYGRMVIDARP--NKFTYPTLFKACSVAQAVQEGRQIHGHVVKHGIGSDVHI 169

Query: 248 LTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAE 307
            +  +  Y+  G +E A  +F      D++  N MI GY   G  E++  LF Q+     
Sbjct: 170 KSAGIQMYASFGRLEDARKMFYS-GESDVVCWNTMIDGYLKCGVLEAAKGLFAQM----- 223

Query: 308 RVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARK 367
                          P  ++   N + +   K G + +                   ARK
Sbjct: 224 ---------------PVKNIGSWNVMINGLAKGGNLGD-------------------ARK 249

Query: 368 LFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGA 427
           LFDE SE+   SW++M+ GY   G  +EA+ +FQ+MQ  +  P    +SS+L+AC+ +GA
Sbjct: 250 LFDEMSERDEISWSSMVDGYISAGRYKEALEIFQQMQREETRPGRFILSSVLAACSNIGA 309

Query: 428 ISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISG 487
           I  G+WVH  +K  + + +  + TAL+DMYAKCG +    E+F+ M  +   TWN MI G
Sbjct: 310 IDQGRWVHAYLKRNSIKLDAVLGTALLDMYAKCGRLDMGWEVFEEMKEREIFTWNAMIGG 369

Query: 488 YGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKP 547
             +HG   +AL+LFS++    ++P+G+T + VL AC+HAG V +G  IFQ+M   +G  P
Sbjct: 370 LAIHGRAEDALELFSKLQEGRMKPNGITLVGVLTACAHAGFVDKGLRIFQTMREFYGVDP 429

Query: 548 LAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKL 607
             EHY CMVD+LGR+G   +A + I  + ++P  AVWGALLGAC IH + +LA    + L
Sbjct: 430 ELEHYGCMVDLLGRSGLFSEAEDLINSMPMKPNAAVWGALLGACRIHGNFDLAERVGKIL 489

Query: 608 FELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSG 667
            EL+P+N G +VLLSNIY+    +   + +R+++K R +   PG +++++ GT H F  G
Sbjct: 490 LELEPQNSGRYVLLSNIYAKVGRFDDVSKIRKLMKNRGIKTVPGVSIVDLNGTVHEFKMG 549

Query: 668 DQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLI 727
           D  HPQ   IY  L+ +  +++ AG   +T   L D++EEEKE  +  HSEKLAIAFGLI
Sbjct: 550 DGSHPQMKEIYRKLKIIKERLQMAGHSPDTSQVLFDIDEEEKETAVNYHSEKLAIAFGLI 609

Query: 728 ATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
            T PG  I I+KNLRVC DCH+ATK IS++  R I+VRD  R+HHFK G CSC D+W
Sbjct: 610 NTLPGKRIHIVKNLRVCDDCHSATKLISQIFDREIIVRDRVRYHHFKNGTCSCKDFW 666



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 126/504 (25%), Positives = 230/504 (45%), Gaps = 67/504 (13%)

Query: 4   KTPQSRNLFLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARA- 62
           K PQ   L L   K   +   LTQ HA ++  G   D        H +S     CYA   
Sbjct: 28  KLPQKTVLKLFDSKSITSLQYLTQLHALVLRSGHFQD--------HYVSGALLKCYANPH 79

Query: 63  ---------LFFSIPKPDLFLFNVIIRG-FSNNEMPKSSICFYTHLRKNTALTPDNFTYS 112
                    +F SIP P++F++N++I+G   NN++ K+ I FY  +  +    P+ FTY 
Sbjct: 80  FSNFDFALKVFSSIPNPNVFIWNIVIKGCLENNKLFKA-IYFYGRMVIDA--RPNKFTYP 136

Query: 113 FVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEK 172
            +  A S       G  +HGH +  G GSD+ + +A + +Y  F  ++ ARK+F    E 
Sbjct: 137 TLFKACSVAQAVQEGRQIHGHVVKHGIGSDVHIKSAGIQMYASFGRLEDARKMF-YSGES 195

Query: 173 DTVLWNSMISGLMKNCCFQDSIWVFGDM-VRNGGTWLDSTSVAAVLPAVAEVQELRLGME 231
           D V WN+MI G +K    + +  +F  M V+N G+W                        
Sbjct: 196 DVVCWNTMIDGYLKCGVLEAAKGLFAQMPVKNIGSW------------------------ 231

Query: 232 IQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGK 291
                              +++  +K G +  A  LF ++   D IS ++M+ GY   G+
Sbjct: 232 -----------------NVMINGLAKGGNLGDARKLFDEMSERDEISWSSMVDGYISAGR 274

Query: 292 TESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTA 351
            + +L +F+Q+     R     +  ++      G +     +H++  ++ I  ++ + TA
Sbjct: 275 YKEALEIFQQMQREETRPGRFILSSVLAACSNIGAIDQGRWVHAYLKRNSIKLDAVLGTA 334

Query: 352 LSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPN 411
           L  +Y++   ++   ++F+E  E+ + +WNAMI G   +G  E+A+ LF ++Q  ++ PN
Sbjct: 335 LLDMYAKCGRLDMGWEVFEEMKEREIFTWNAMIGGLAIHGRAEDALELFSKLQEGRMKPN 394

Query: 412 PVTVSSILSACAQLGAISLGKWVHELVKS-RNFESNIYVSTALIDMYAKCGNIVEARELF 470
            +T+  +L+ACA  G +  G  + + ++     +  +     ++D+  + G   EA +L 
Sbjct: 395 GITLVGVLTACAHAGFVDKGLRIFQTMREFYGVDPELEHYGCMVDLLGRSGLFSEAEDLI 454

Query: 471 DLMSHK-SEVTWNTMISGYGLHGH 493
           + M  K +   W  ++    +HG+
Sbjct: 455 NSMPMKPNAAVWGALLGACRIHGN 478



 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 101/375 (26%), Positives = 165/375 (44%), Gaps = 47/375 (12%)

Query: 223 VQELRLGMEIQCLGLKLG-FHDHVYVLTGLVSFYSKC--GEVERAELLFRDIVRPDLISC 279
           +  L+   ++  L L+ G F DH YV   L+  Y+       + A  +F  I  P++   
Sbjct: 43  ITSLQYLTQLHALVLRSGHFQDH-YVSGALLKCYANPHFSNFDFALKVFSSIPNPNVFIW 101

Query: 280 NAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLK 339
           N +I G   N K   ++  + +++  A R N  T   L         +     IH   +K
Sbjct: 102 NIVIKGCLENNKLFKAIYFYGRMVIDA-RPNKFTYPTLFKACSVAQAVQEGRQIHGHVVK 160

Query: 340 SGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISL 399
            GI S+  + +A   +Y+    +E ARK+F  S E  +  WN MI GY + G+ E A  L
Sbjct: 161 HGIGSDVHIKSAGIQMYASFGRLEDARKMF-YSGESDVVCWNTMIDGYLKCGVLEAAKGL 219

Query: 400 FQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAK 459
           F +M        PV               ++G W                   +I+  AK
Sbjct: 220 FAQM--------PVK--------------NIGSW-----------------NVMINGLAK 240

Query: 460 CGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSV 519
            GN+ +AR+LFD MS + E++W++M+ GY   G   EAL++F +M     RP      SV
Sbjct: 241 GGNLGDARKLFDEMSERDEISWSSMVDGYISAGRYKEALEIFQQMQREETRPGRFILSSV 300

Query: 520 LYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEP 579
           L ACS+ G + +G  +  + +  +  K  A     ++D+  + G+L+   E  + +  E 
Sbjct: 301 LAACSNIGAIDQGRWV-HAYLKRNSIKLDAVLGTALLDMYAKCGRLDMGWEVFEEMK-ER 358

Query: 580 GPAVWGALLGACMIH 594
               W A++G   IH
Sbjct: 359 EIFTWNAMIGGLAIH 373



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 68/301 (22%), Positives = 129/301 (42%), Gaps = 7/301 (2%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           AR LF  + + D   ++ ++ G+ +    K ++  +  +++     P  F  S VL+A S
Sbjct: 247 ARKLFDEMSERDEISWSSMVDGYISAGRYKEALEIFQQMQREET-RPGRFILSSVLAACS 305

Query: 120 ACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNS 179
                  G  +H +   +    D  +G AL+D+Y K   +    +VF++M E++   WN+
Sbjct: 306 NIGAIDQGRWVHAYLKRNSIKLDAVLGTALLDMYAKCGRLDMGWEVFEEMKEREIFTWNA 365

Query: 180 MISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEI-QCLGLK 238
           MI GL  +   +D++ +F  + + G    +  ++  VL A A    +  G+ I Q +   
Sbjct: 366 MIGGLAIHGRAEDALELFSKL-QEGRMKPNGITLVGVLTACAHAGFVDKGLRIFQTMREF 424

Query: 239 LGFHDHVYVLTGLVSFYSKCGEVERAELLFRDI-VRPDLISCNAMISGYTCNGKTESSLR 297
            G    +     +V    + G    AE L   + ++P+     A++     +G  + + R
Sbjct: 425 YGVDPELEHYGCMVDLLGRSGLFSEAEDLINSMPMKPNAAVWGALLGACRIHGNFDLAER 484

Query: 298 LFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGI--VSNSSVLTALSTV 355
           + + LL   E  NS   V L  ++   G     + I       GI  V   S++    TV
Sbjct: 485 VGKILL-ELEPQNSGRYVLLSNIYAKVGRFDDVSKIRKLMKNRGIKTVPGVSIVDLNGTV 543

Query: 356 Y 356
           +
Sbjct: 544 H 544


>gi|357493705|ref|XP_003617141.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355518476|gb|AET00100.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 684

 Score =  459 bits (1180), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 271/685 (39%), Positives = 392/685 (57%), Gaps = 11/685 (1%)

Query: 106 PDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDL--FVGAALVDLYFKFSWVKSAR 163
           P N   S + SA S  C   +G  +H H I+  + + L  F+   LV++Y K   + SA+
Sbjct: 5   PQNLLGSLLESAVSTHCS-ILGRTIHAH-IIRTHVTPLPSFLSNHLVNMYSKLDLLNSAQ 62

Query: 164 KVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEV 223
            V      +  V W S+ISG + N  F  ++  F +M R+     D T    V  A A V
Sbjct: 63  HVLSLTHLRTVVTWTSLISGCVHNRRFLPALLHFTNMRRDNVQPNDFT-FPCVFKASAFV 121

Query: 224 QELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMI 283
           Q    G +I  L LK G    V+V       Y K G    A  +F ++ + +L + NA I
Sbjct: 122 QIPMTGKQIHGLALKGGMIYDVFVGCSCFDMYCKTGFRGDACNMFDEMPQRNLATWNAYI 181

Query: 284 SGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIV 343
           S    + ++  ++  F++ L      NS T    +        L+L   +H+F ++ G  
Sbjct: 182 SNAVQDRRSLDAIVAFKEFLCVHGEPNSITFCAFLNACVDMVRLNLGRQLHAFIVRCGYK 241

Query: 344 SNSSVLTALSTVYSRLNEMEAARKLFDE-SSEKSLASWNAMIAGYTQNGLTEEAISLFQE 402
            + SV   L   Y +  ++ +A  +F+   + K++ SW +M+A   QN   E A  +F  
Sbjct: 242 EDVSVANGLIDFYGKCGDIVSAEMVFNRIGNRKNVVSWCSMLAALVQNHEEERACMVF-- 299

Query: 403 MQASK-VAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCG 461
           +QA K V P    +SS+LSACA+LG + LG+ VH L      E NI+V +AL+DMY KCG
Sbjct: 300 LQARKEVEPTDFMISSVLSACAELGGLELGRSVHALAVKACVEDNIFVGSALVDMYGKCG 359

Query: 462 NIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEML--HSGIRPSGVTFLSV 519
           +I  A ++F  +  ++ VTWN MI GY   G    AL+LF EM     GIRPS VT +S+
Sbjct: 360 SIENAEQVFSELPERNLVTWNAMIGGYAHQGDIDMALRLFEEMTLGSHGIRPSYVTLISI 419

Query: 520 LYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEP 579
           L  CS  G V  G +IF+SM  ++G +P AEH+AC+VD+LGR+G +++A EFI+ +A++P
Sbjct: 420 LSVCSRVGAVERGIQIFESMRLNYGIEPGAEHFACVVDLLGRSGLVDRAYEFIQNMAIQP 479

Query: 580 GPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQ 639
             +VWGALLGAC +H  T L ++A+EKLFELD  + G HV+LSN+ ++   + +A  VR+
Sbjct: 480 TISVWGALLGACRMHGKTELGKIAAEKLFELDHVDSGNHVVLSNMLASAGRWEEATVVRK 539

Query: 640 VVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVT 699
            +K   + K  G + I V    HVF + D  H +++ I AML KL G M+EAG+  +T  
Sbjct: 540 EMKDIGIKKNVGYSWIAVKNRIHVFQAKDSSHDRNSEIQAMLGKLRGGMKEAGYVPDTNL 599

Query: 700 ALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTG 759
           +L D+E+EEK   +  HSEK+A+AFGLIA   G  IRI KNLR+C DCH+A KFIS++ G
Sbjct: 600 SLFDLEDEEKASEVWYHSEKIALAFGLIALPQGVPIRITKNLRICGDCHSAIKFISRIVG 659

Query: 760 RVIVVRDANRFHHFKGGVCSCGDYW 784
           R I+VRD +RFH FK G CSC DYW
Sbjct: 660 REIIVRDNHRFHRFKDGCCSCKDYW 684



 Score = 83.2 bits (204), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 95/391 (24%), Positives = 171/391 (43%), Gaps = 43/391 (10%)

Query: 27  QTHAQIIIHGFQNDLSTVTKLAHRLSDFKATC----YARALFFSI-PKPDLFLFNVIIRG 81
           Q HA I+  G++ D+S    +A+ L DF   C     A  +F  I  + ++  +  ++  
Sbjct: 230 QLHAFIVRCGYKEDVS----VANGLIDFYGKCGDIVSAEMVFNRIGNRKNVVSWCSMLAA 285

Query: 82  FSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGS 141
              N   + +   +   RK   + P +F  S VLSA +      +G  +H  A+ +    
Sbjct: 286 LVQNHEEERACMVFLQARKE--VEPTDFMISSVLSACAELGGLELGRSVHALAVKACVED 343

Query: 142 DLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMV 201
           ++FVG+ALVD+Y K   +++A +VF ++PE++ V WN+MI G         ++ +F +M 
Sbjct: 344 NIFVGSALVDMYGKCGSIENAEQVFSELPERNLVTWNAMIGGYAHQGDIDMALRLFEEMT 403

Query: 202 RNG-GTWLDSTSVAAVLPAVAEVQELRLGMEI-QCLGLKLGFHDHVYVLTGLVSFYSKCG 259
               G      ++ ++L   + V  +  G++I + + L  G          +V    + G
Sbjct: 404 LGSHGIRPSYVTLISILSVCSRVGAVERGIQIFESMRLNYGIEPGAEHFACVVDLLGRSG 463

Query: 260 EVERAELLFRDI-VRPDLISCNAMISGYTCNGKTE----SSLRLFR-------------Q 301
            V+RA    +++ ++P +    A++     +GKTE    ++ +LF               
Sbjct: 464 LVDRAYEFIQNMAIQPTISVWGALLGACRMHGKTELGKIAAEKLFELDHVDSGNHVVLSN 523

Query: 302 LLASAERVNSSTIVGL------IPVFYPFGHLHLTNCIHSFCLK-SGIVSNSSVLTALST 354
           +LASA R   +T+V        I     +  + + N IH F  K S    NS +   L  
Sbjct: 524 MLASAGRWEEATVVRKEMKDIGIKKNVGYSWIAVKNRIHVFQAKDSSHDRNSEIQAMLGK 583

Query: 355 VYSRLNEM----EAARKLFD-ESSEKSLASW 380
           +   + E     +    LFD E  EK+   W
Sbjct: 584 LRGGMKEAGYVPDTNLSLFDLEDEEKASEVW 614


>gi|356515406|ref|XP_003526391.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
           mitochondrial-like [Glycine max]
          Length = 647

 Score =  459 bits (1180), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 238/589 (40%), Positives = 354/589 (60%), Gaps = 7/589 (1%)

Query: 199 DMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKC 258
           D++  G    D T    +L    ++ +L+ G  +    L   F   + +   L+  Y++C
Sbjct: 63  DLIDCGSLEPDRTLYNTLLKRCTQLGKLKEGKLVHFHVLNSNFKHDLVIQNSLLFMYARC 122

Query: 259 GEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLI 318
           G +E A  LF ++   D++S  +MI+GY  N +   +L LF ++L+     N  T+  L+
Sbjct: 123 GSLEGARRLFDEMPHRDMVSWTSMITGYAQNDRASDALLLFPRMLSDGAEPNEFTLSSLV 182

Query: 319 PVFYPFGHLHLTNC---IHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEK 375
                 G++   NC   IH+ C K G  SN  V ++L  +Y+R   +  A  +FD+   K
Sbjct: 183 KCC---GYMASYNCGRQIHACCWKYGCHSNVFVGSSLVDMYARCGYLGEAMLVFDKLGCK 239

Query: 376 SLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVH 435
           +  SWNA+IAGY + G  EEA++LF  MQ     P   T S++LS+C+ +G +  GKW+H
Sbjct: 240 NEVSWNALIAGYARKGEGEEALALFVRMQREGYRPTEFTYSALLSSCSSMGCLEQGKWLH 299

Query: 436 ELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGL 495
             +   + +   YV   L+ MYAK G+I +A ++FD +     V+ N+M+ GY  HG G 
Sbjct: 300 AHLMKSSQKLVGYVGNTLLHMYAKSGSIRDAEKVFDKLVKVDVVSCNSMLIGYAQHGLGK 359

Query: 496 EALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACM 555
           EA Q F EM+  GI P+ +TFLSVL ACSHA L+ EG   F  ++  +  +P   HYA +
Sbjct: 360 EAAQQFDEMIRFGIEPNDITFLSVLTACSHARLLDEGKHYF-GLMRKYNIEPKVSHYATI 418

Query: 556 VDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENV 615
           VD+LGRAG L++A  FI+ + +EP  A+WGALLGA  +HK+T +   A++++FELDP   
Sbjct: 419 VDLLGRAGLLDQAKSFIEEMPIEPTVAIWGALLGASKMHKNTEMGAYAAQRVFELDPSYP 478

Query: 616 GYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQST 675
           G H LL+NIY++   +   A VR+++K   + K P C+ +EV  + HVF + D  HPQ  
Sbjct: 479 GTHTLLANIYASAGRWEDVAKVRKIMKDSGVKKEPACSWVEVENSVHVFVANDVAHPQKE 538

Query: 676 AIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEI 735
            I+ M EKLN K++E G+  +T   L  V+++EKEL ++ HSEKLA++F L+ T PG+ I
Sbjct: 539 KIHKMWEKLNQKIKEIGYVPDTSHVLLFVDQQEKELNLQYHSEKLALSFALLNTPPGSTI 598

Query: 736 RIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           RI+KN+RVC DCH+A K++S V  R I+VRD NRFHHF  G CSCGDYW
Sbjct: 599 RIMKNIRVCGDCHSAIKYVSLVVKREIIVRDTNRFHHFCDGFCSCGDYW 647



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 115/424 (27%), Positives = 206/424 (48%), Gaps = 7/424 (1%)

Query: 103 ALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSA 162
           +L PD   Y+ +L   +       G L+H H + S +  DL +  +L+ +Y +   ++ A
Sbjct: 69  SLEPDRTLYNTLLKRCTQLGKLKEGKLVHFHVLNSNFKHDLVIQNSLLFMYARCGSLEGA 128

Query: 163 RKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAE 222
           R++FD+MP +D V W SMI+G  +N    D++ +F  M+ +G    +  ++++++     
Sbjct: 129 RRLFDEMPHRDMVSWTSMITGYAQNDRASDALLLFPRMLSDGAE-PNEFTLSSLVKCCGY 187

Query: 223 VQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAM 282
           +     G +I     K G H +V+V + LV  Y++CG +  A L+F  +   + +S NA+
Sbjct: 188 MASYNCGRQIHACCWKYGCHSNVFVGSSLVDMYARCGYLGEAMLVFDKLGCKNEVSWNAL 247

Query: 283 ISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGI 342
           I+GY   G+ E +L LF ++     R    T   L+      G L     +H+  +KS  
Sbjct: 248 IAGYARKGEGEEALALFVRMQREGYRPTEFTYSALLSSCSSMGCLEQGKWLHAHLMKSSQ 307

Query: 343 VSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQE 402
                V   L  +Y++   +  A K+FD+  +  + S N+M+ GY Q+GL +EA   F E
Sbjct: 308 KLVGYVGNTLLHMYAKSGSIRDAEKVFDKLVKVDVVSCNSMLIGYAQHGLGKEAAQQFDE 367

Query: 403 MQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGN 462
           M    + PN +T  S+L+AC+    +  GK    L++  N E  +     ++D+  + G 
Sbjct: 368 MIRFGIEPNDITFLSVLTACSHARLLDEGKHYFGLMRKYNIEPKVSHYATIVDLLGRAGL 427

Query: 463 IVEARELFDLMSHKSEVT-WNTMISGYGLHGH---GLEALQLFSEMLHSGIRPSGVTFLS 518
           + +A+   + M  +  V  W  ++    +H +   G  A Q   E+  S   P   T L+
Sbjct: 428 LDQAKSFIEEMPIEPTVAIWGALLGASKMHKNTEMGAYAAQRVFELDPS--YPGTHTLLA 485

Query: 519 VLYA 522
            +YA
Sbjct: 486 NIYA 489


>gi|302758642|ref|XP_002962744.1| hypothetical protein SELMODRAFT_78092 [Selaginella moellendorffii]
 gi|300169605|gb|EFJ36207.1| hypothetical protein SELMODRAFT_78092 [Selaginella moellendorffii]
          Length = 935

 Score =  458 bits (1179), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 267/785 (34%), Positives = 437/785 (55%), Gaps = 38/785 (4%)

Query: 27  QTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIP---KPDLFLFNVIIRGFS 83
           + H+QI    F+ +      L    S   +   A+  F  +P   K D+  +N +I  F 
Sbjct: 162 RIHSQISDRDFEENSVLGNALISMYSKCGSLIDAKQAFDRLPRASKRDVVTWNAMISAFL 221

Query: 84  NNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVL-----LHGHAIVSG 138
            N   + ++  +  + ++ A  P++ T+  VL +   C +  +  L     +HG  + +G
Sbjct: 222 RNGSAREALQLFRDMDRDGAPPPNSVTFVSVLDS---CVEAGLLSLEDVRAIHGRIVGAG 278

Query: 139 YGSDLFVGAALVDLYFKFSWVKSARKVF----DKMPEKDTVLWNSMISGLMKNCCFQDSI 194
              + FV  ALVD Y K   +  A +VF    D+ P    V  ++MIS   +N   Q+S+
Sbjct: 279 IEREAFVRTALVDSYGKLGSLDDAWEVFLRKGDEEPSTSLVTCSAMISACWQNGWPQESL 338

Query: 195 WVFGDMVRNGGTWLDSTSVAAVLPAVAEVQE-------LRLGMEIQCLGLKLGFHDHVYV 247
            +F  M   G T     ++ +VL A + +Q        L   ME+          D+V +
Sbjct: 339 RLFFAMNLEG-TKPSGVTLVSVLNACSMLQVGSATAFVLEQAMEVVS-----ATRDNV-L 391

Query: 248 LTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAE 307
            T L++ Y++  ++ RA   F  I  PD++S NAM + Y  + ++  +L LF ++L    
Sbjct: 392 GTTLLTTYARSNDLPRARATFDAIQSPDVVSWNAMAAAYLQHHRSREALVLFERMLLEGV 451

Query: 308 RVNSSTIVGLI---PVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEA 364
           R + +T +  +     + P     +   I S   ++G+  +++V  A   +Y++   +  
Sbjct: 452 RPSVATFITALTACAAYPPQTASAIGKRIQSLLEEAGLEGDTAVANATLNMYAKCGSLAD 511

Query: 365 ARKLFDESS--EKSLASWNAMIAGYTQNGLTEEAISLFQEMQASK-VAPNPVTVSSILSA 421
           AR +F+  S   +   +WN+M+A Y  +GL +EA  LFQ M+A K V PN VT  ++L A
Sbjct: 512 ARAVFERISPARRDCITWNSMLAAYGHHGLGKEAFELFQAMEAEKLVKPNKVTFVAVLDA 571

Query: 422 CAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSE--V 479
                +I+ G+ +H  V S  FES+  +  AL++MYAKCG++ +A+ +FD  S   E  +
Sbjct: 572 STSRTSIAQGREIHARVVSNGFESDTVIQNALLNMYAKCGSLDDAQAIFDKSSSNQEDVI 631

Query: 480 TWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSM 539
            W ++I+GY  +G    AL+LF  M   G+RP+ VTF+S L AC+H G + +G E+   M
Sbjct: 632 AWTSLIAGYAQYGQAERALKLFWTMQQQGVRPNHVTFISALTACNHGGKLEQGCELLSGM 691

Query: 540 IHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNL 599
             DHG  P ++H++C+VD+LGR G+L++A + ++  + +     W ALL AC   K+   
Sbjct: 692 TPDHGILPASKHFSCIVDLLGRCGRLDEAEKLLERTS-QADVITWMALLDACKNSKELER 750

Query: 600 ARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGG 659
               +E++ +LDPE    +++L+++Y+A   + +AAT+R+ +  + +   PGC+ +EV  
Sbjct: 751 GERCAERIMQLDPEVASSYIVLASMYAAAGRWNEAATIRKTMLDKGIRADPGCSAVEVNQ 810

Query: 660 TPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEK 719
             H F++GD+ HP+S  IY  LE+L+  ++ AG+  +T   LHDV +E KE ++  HSEK
Sbjct: 811 ELHSFSAGDKSHPKSEEIYLELERLHWSIKAAGYVADTGLVLHDVSQEHKERLLMRHSEK 870

Query: 720 LAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCS 779
           LAIAFGL++T  G+ +R+IKNLRVC DCHTATK ISKVTGR I++RD++R+HHF  G CS
Sbjct: 871 LAIAFGLMSTPSGSPLRVIKNLRVCSDCHTATKLISKVTGRDILMRDSSRYHHFTSGTCS 930

Query: 780 CGDYW 784
           CGDYW
Sbjct: 931 CGDYW 935



 Score =  202 bits (513), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 160/604 (26%), Positives = 288/604 (47%), Gaps = 28/604 (4%)

Query: 6   PQSRNLFLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATC--YARAL 63
           P +    L      +   Q  + HA I+      DL   + LA  L    A C   A A 
Sbjct: 43  PSTYGCLLQACGRLRALKQGQRLHAHILSRRI--DLHNHSFLASDLIVMHAKCGNLAEAE 100

Query: 64  FFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCD 123
             +     ++    +IR +  +  P  ++  +  +     + P+      +++A S   +
Sbjct: 101 ALADRFASVYSCTAMIRAWMEHGRPDKAMELFDRME----VRPNCHALIALVNACSCLGN 156

Query: 124 RSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMP---EKDTVLWNSM 180
            + G  +H       +  +  +G AL+ +Y K   +  A++ FD++P   ++D V WN+M
Sbjct: 157 LAAGRRIHSQISDRDFEENSVLGNALISMYSKCGSLIDAKQAFDRLPRASKRDVVTWNAM 216

Query: 181 ISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKL- 239
           IS  ++N   ++++ +F DM R+G    +S +  +VL +  E   L L  +++ +  ++ 
Sbjct: 217 ISAFLRNGSAREALQLFRDMDRDGAPPPNSVTFVSVLDSCVEAGLLSL-EDVRAIHGRIV 275

Query: 240 --GFHDHVYVLTGLVSFYSKCGEVERA-ELLFR---DIVRPDLISCNAMISGYTCNGKTE 293
             G     +V T LV  Y K G ++ A E+  R   +     L++C+AMIS    NG  +
Sbjct: 276 GAGIEREAFVRTALVDSYGKLGSLDDAWEVFLRKGDEEPSTSLVTCSAMISACWQNGWPQ 335

Query: 294 SSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVL-TAL 352
            SLRLF  +     + +  T+V ++           T  +    ++    +  +VL T L
Sbjct: 336 ESLRLFFAMNLEGTKPSGVTLVSVLNACSMLQVGSATAFVLEQAMEVVSATRDNVLGTTL 395

Query: 353 STVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNP 412
            T Y+R N++  AR  FD      + SWNAM A Y Q+  + EA+ LF+ M    V P+ 
Sbjct: 396 LTTYARSNDLPRARATFDAIQSPDVVSWNAMAAAYLQHHRSREALVLFERMLLEGVRPSV 455

Query: 413 VTVSSILSACAQL---GAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEAREL 469
            T  + L+ACA      A ++GK +  L++    E +  V+ A ++MYAKCG++ +AR +
Sbjct: 456 ATFITALTACAAYPPQTASAIGKRIQSLLEEAGLEGDTAVANATLNMYAKCGSLADARAV 515

Query: 470 FDLMS--HKSEVTWNTMISGYGLHGHGLEALQLFSEM-LHSGIRPSGVTFLSVLYACSHA 526
           F+ +S   +  +TWN+M++ YG HG G EA +LF  M     ++P+ VTF++VL A +  
Sbjct: 516 FERISPARRDCITWNSMLAAYGHHGLGKEAFELFQAMEAEKLVKPNKVTFVAVLDASTSR 575

Query: 527 GLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALE-FIKGLAVEPGPAVWG 585
             + +G EI   ++ + GF+        ++++  + G L+ A   F K  + +     W 
Sbjct: 576 TSIAQGREIHARVVSN-GFESDTVIQNALLNMYAKCGSLDDAQAIFDKSSSNQEDVIAWT 634

Query: 586 ALLG 589
           +L+ 
Sbjct: 635 SLIA 638



 Score =  126 bits (316), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 89/269 (33%), Positives = 146/269 (54%), Gaps = 15/269 (5%)

Query: 333 IHSFCLKSGI-VSNSSVLTA-LSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQN 390
           +H+  L   I + N S L + L  ++++   +  A  L D  +  S+ S  AMI  + ++
Sbjct: 65  LHAHILSRRIDLHNHSFLASDLIVMHAKCGNLAEAEALADRFA--SVYSCTAMIRAWMEH 122

Query: 391 GLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVS 450
           G  ++A+ LF  M+   V PN   + ++++AC+ LG ++ G+ +H  +  R+FE N  + 
Sbjct: 123 GRPDKAMELFDRME---VRPNCHALIALVNACSCLGNLAAGRRIHSQISDRDFEENSVLG 179

Query: 451 TALIDMYAKCGNIVEARELFDLMSHKSE---VTWNTMISGYGLHGHGLEALQLFSEMLHS 507
            ALI MY+KCG++++A++ FD +   S+   VTWN MIS +  +G   EALQLF +M   
Sbjct: 180 NALISMYSKCGSLIDAKQAFDRLPRASKRDVVTWNAMISAFLRNGSAREALQLFRDMDRD 239

Query: 508 GI-RPSGVTFLSVLYACSHAGLVREGD-EIFQSMIHDHGFKPLAEHYACMVDILGRAGQL 565
           G   P+ VTF+SVL +C  AGL+   D       I   G +  A     +VD  G+ G L
Sbjct: 240 GAPPPNSVTFVSVLDSCVEAGLLSLEDVRAIHGRIVGAGIEREAFVRTALVDSYGKLGSL 299

Query: 566 EKALE-FIKGLAVEPGPAV--WGALLGAC 591
           + A E F++    EP  ++    A++ AC
Sbjct: 300 DDAWEVFLRKGDEEPSTSLVTCSAMISAC 328


>gi|414869547|tpg|DAA48104.1| TPA: hypothetical protein ZEAMMB73_530850 [Zea mays]
          Length = 1091

 Score =  458 bits (1179), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 243/725 (33%), Positives = 401/725 (55%), Gaps = 4/725 (0%)

Query: 60   ARALFFSIP-KPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAA 118
            AR +F ++  K ++ ++N+I+ G++     + S+  +  + +   + PD    S +L   
Sbjct: 369  ARRVFDAMSSKGNVHVWNLIMGGYAKVGEFEESLSLFVQMHE-LGIAPDEHAISCLLKCI 427

Query: 119  SACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWN 178
            +       G++ HG+ +  G+G+   V  AL+  Y K + +  A  VF++MP +DT+ WN
Sbjct: 428  TCLSCARDGLVAHGYIVKLGFGAQCAVCNALISFYAKSNMIGDAVLVFNRMPRQDTISWN 487

Query: 179  SMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLK 238
            S+ISG   N    ++I +F  M   G   LDS ++ +VLPA A+ +    G  +    +K
Sbjct: 488  SVISGCSSNGLNSEAIELFIRMWTQGQE-LDSVTLLSVLPACAQSRYWFAGRVVHGYSVK 546

Query: 239  LGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRL 298
             G      +   L+  YS C + +    +FR + + +++S  AMI+ Y   G  +    L
Sbjct: 547  TGLIGETSLANALLDMYSNCSDWQSTNQIFRSMGQKNVVSWTAMITSYMRAGLFDKVAGL 606

Query: 299  FRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSR 358
             ++++    R +   +   +  F     L     +H + +++G+     V  AL  +Y +
Sbjct: 607  LQEMVLDGIRPDVFAVTSALHAFAGDESLKQGKSVHGYTIRNGMEKLLPVANALMEMYVK 666

Query: 359  LNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSI 418
               +E AR +FD  + K + SWN +I GY++N    E+ SLF +M   +  PN VT++ I
Sbjct: 667  CRNVEEARLIFDRVTNKDVISWNTLIGGYSRNNFPNESFSLFSDMLL-QFRPNAVTMTCI 725

Query: 419  LSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSE 478
            L A A + ++  G+ +H     R F  + Y S AL+DMY KCG ++ AR LFD ++ K+ 
Sbjct: 726  LPAAASISSLERGREIHAYALRRGFLEDSYASNALVDMYVKCGALLVARVLFDRLTKKNL 785

Query: 479  VTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQS 538
            ++W  MI+GYG+HG G  A+ LF +M  SGI P   +F ++LYAC H+GL  EG   F++
Sbjct: 786  ISWTIMIAGYGMHGFGKHAIALFEQMRGSGIEPDAASFSAILYACCHSGLAAEGRRFFKA 845

Query: 539  MIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTN 598
            M  ++  +P  +HY C+VD+L R G L++ALEFI+ + +EP  ++W +LL  C IHK+  
Sbjct: 846  MQKEYKIEPKLKHYTCIVDLLSRTGDLKEALEFIESMPIEPDSSIWVSLLHGCRIHKNVK 905

Query: 599  LARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVG 658
            LA   ++K+F+L+PEN GY+VLL+NIY+    +     ++  +  R L +  G + IEV 
Sbjct: 906  LAEKVADKVFKLEPENTGYYVLLANIYAEAERWEAVKKLKNKIGGRGLRENTGYSWIEVR 965

Query: 659  GTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSE 718
               HVF + ++ HP    I   L+ +  +MR+ G   +   AL   ++   +  +  HS 
Sbjct: 966  SKVHVFIADNRNHPDWNRIAEFLDDVARRMRQEGHDPKKKYALMGADDAVHDEALCGHSS 1025

Query: 719  KLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVC 778
            KLA+AFG++    G  IR+ KN +VC  CH A KFISK+  R I++RD++RFH F+GG C
Sbjct: 1026 KLAVAFGVLNLPEGRPIRVTKNSKVCSHCHEAAKFISKMCNREIILRDSSRFHRFEGGRC 1085

Query: 779  SCGDY 783
            SC  Y
Sbjct: 1086 SCRGY 1090



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 129/425 (30%), Positives = 213/425 (50%), Gaps = 24/425 (5%)

Query: 123 DRSIGVLLHGHAIV--------SGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEK-- 172
           +RS+      HA++         G GS L  G  LV  Y K   +  AR VFD MP +  
Sbjct: 110 ERSLEAAKRAHALIRASSAAATGGKGSVL--GKRLVLAYLKCGDLGEARTVFDGMPPQAA 167

Query: 173 DTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEI 232
           D  +W S++S   K   FQ+++ +F  M +  G   D+ +V+ VL  V+ +  L  G  I
Sbjct: 168 DVRVWTSLMSAYAKAGDFQEAVSLFRQM-QCCGVSPDAHAVSCVLKCVSSLGSLTEGEVI 226

Query: 233 QCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKT 292
             L  KLG      V   L++ YS+CG +E A  +F  +   D IS N+MI G   NG  
Sbjct: 227 HGLLEKLGLGQACAVANALIAVYSRCGRMEDAARVFDSMHPRDAISWNSMIGGCFSNGWH 286

Query: 293 ESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGI---------- 342
            +++ LF ++ +    ++S T++ ++P     G+  +   +H + +KSG+          
Sbjct: 287 GTAVDLFSKMWSQGTEISSVTVLSVLPACAGLGYGLIGKAVHGYSVKSGLLWGLDSVQSG 346

Query: 343 VSNSSVLTALSTVYSRLNEMEAARKLFDE-SSEKSLASWNAMIAGYTQNGLTEEAISLFQ 401
           + ++++ + L  +Y +  +M +AR++FD  SS+ ++  WN ++ GY + G  EE++SLF 
Sbjct: 347 IDDAALGSKLVFMYVKCGDMASARRVFDAMSSKGNVHVWNLIMGGYAKVGEFEESLSLFV 406

Query: 402 EMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCG 461
           +M    +AP+   +S +L     L     G   H  +    F +   V  ALI  YAK  
Sbjct: 407 QMHELGIAPDEHAISCLLKCITCLSCARDGLVAHGYIVKLGFGAQCAVCNALISFYAKSN 466

Query: 462 NIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLY 521
            I +A  +F+ M  +  ++WN++ISG   +G   EA++LF  M   G     VT LSVL 
Sbjct: 467 MIGDAVLVFNRMPRQDTISWNSVISGCSSNGLNSEAIELFIRMWTQGQELDSVTLLSVLP 526

Query: 522 ACSHA 526
           AC+ +
Sbjct: 527 ACAQS 531



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 133/499 (26%), Positives = 222/499 (44%), Gaps = 22/499 (4%)

Query: 60  ARALFFSIPK--PDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSA 117
           AR +F  +P    D+ ++  ++  ++     + ++  +  + +   ++PD    S VL  
Sbjct: 155 ARTVFDGMPPQAADVRVWTSLMSAYAKAGDFQEAVSLFRQM-QCCGVSPDAHAVSCVLKC 213

Query: 118 ASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLW 177
            S+    + G ++HG     G G    V  AL+ +Y +   ++ A +VFD M  +D + W
Sbjct: 214 VSSLGSLTEGEVIHGLLEKLGLGQACAVANALIAVYSRCGRMEDAARVFDSMHPRDAISW 273

Query: 178 NSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGL 237
           NSMI G   N     ++ +F  M    GT + S +V +VLPA A +    +G  +    +
Sbjct: 274 NSMIGGCFSNGWHGTAVDLFSKMWSQ-GTEISSVTVLSVLPACAGLGYGLIGKAVHGYSV 332

Query: 238 KLGFH----------DHVYVLTGLVSFYSKCGEVERAELLFRDI-VRPDLISCNAMISGY 286
           K G            D   + + LV  Y KCG++  A  +F  +  + ++   N ++ GY
Sbjct: 333 KSGLLWGLDSVQSGIDDAALGSKLVFMYVKCGDMASARRVFDAMSSKGNVHVWNLIMGGY 392

Query: 287 TCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNS 346
              G+ E SL LF Q+       +   I  L+               H + +K G  +  
Sbjct: 393 AKVGEFEESLSLFVQMHELGIAPDEHAISCLLKCITCLSCARDGLVAHGYIVKLGFGAQC 452

Query: 347 SVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQAS 406
           +V  AL + Y++ N +  A  +F+    +   SWN++I+G + NGL  EAI LF  M   
Sbjct: 453 AVCNALISFYAKSNMIGDAVLVFNRMPRQDTISWNSVISGCSSNGLNSEAIELFIRMWTQ 512

Query: 407 KVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEA 466
               + VT+ S+L ACAQ      G+ VH             ++ AL+DMY+ C +    
Sbjct: 513 GQELDSVTLLSVLPACAQSRYWFAGRVVHGYSVKTGLIGETSLANALLDMYSNCSDWQST 572

Query: 467 RELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHA 526
            ++F  M  K+ V+W  MI+ Y   G   +   L  EM+  GIRP      S L+A +  
Sbjct: 573 NQIFRSMGQKNVVSWTAMITSYMRAGLFDKVAGLLQEMVLDGIRPDVFAVTSALHAFA-- 630

Query: 527 GLVREGDEIFQSMIHDHGF 545
                GDE  +     HG+
Sbjct: 631 -----GDESLKQGKSVHGY 644



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 100/301 (33%), Positives = 144/301 (47%), Gaps = 20/301 (6%)

Query: 251 LVSFYSKCGEVERAELLFRDIVRP---DLISCNAMISGYTCNGKTESSLRLFRQLLASAE 307
           LV  Y KCG++  A  +F D + P   D+    +++S Y   G  + ++ LFRQ+     
Sbjct: 142 LVLAYLKCGDLGEARTVF-DGMPPQAADVRVWTSLMSAYAKAGDFQEAVSLFRQMQCCGV 200

Query: 308 RVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARK 367
             ++  +  ++      G L     IH    K G+    +V  AL  VYSR   ME A +
Sbjct: 201 SPDAHAVSCVLKCVSSLGSLTEGEVIHGLLEKLGLGQACAVANALIAVYSRCGRMEDAAR 260

Query: 368 LFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGA 427
           +FD    +   SWN+MI G   NG    A+ LF +M +     + VTV S+L ACA LG 
Sbjct: 261 VFDSMHPRDAISWNSMIGGCFSNGWHGTAVDLFSKMWSQGTEISSVTVLSVLPACAGLGY 320

Query: 428 ISLGKWVHEL-VKS------RNFESNI---YVSTALIDMYAKCGNIVEARELFDLMSHKS 477
             +GK VH   VKS       + +S I    + + L+ MY KCG++  AR +FD MS K 
Sbjct: 321 GLIGKAVHGYSVKSGLLWGLDSVQSGIDDAALGSKLVFMYVKCGDMASARRVFDAMSSKG 380

Query: 478 EV-TWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVL-----YACSHAGLVRE 531
            V  WN ++ GY   G   E+L LF +M   GI P       +L      +C+  GLV  
Sbjct: 381 NVHVWNLIMGGYAKVGEFEESLSLFVQMHELGIAPDEHAISCLLKCITCLSCARDGLVAH 440

Query: 532 G 532
           G
Sbjct: 441 G 441



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/181 (23%), Positives = 81/181 (44%), Gaps = 10/181 (5%)

Query: 418 ILSACAQLGAISLGKWVHELVKSRNFESN----IYVSTALIDMYAKCGNIVEARELFDLM 473
           ++  C +  ++   K  H L+++ +  +       +   L+  Y KCG++ EAR +FD M
Sbjct: 103 VVQLCGEERSLEAAKRAHALIRASSAAATGGKGSVLGKRLVLAYLKCGDLGEARTVFDGM 162

Query: 474 SHKSE--VTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVRE 531
             ++     W +++S Y   G   EA+ LF +M   G+ P       VL   S  G + E
Sbjct: 163 PPQAADVRVWTSLMSAYAKAGDFQEAVSLFRQMQCCGVSPDAHAVSCVLKCVSSLGSLTE 222

Query: 532 GDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAV-WGALLGA 590
           G E+   ++   G          ++ +  R G++E A       ++ P  A+ W +++G 
Sbjct: 223 G-EVIHGLLEKLGLGQACAVANALIAVYSRCGRMEDAARVFD--SMHPRDAISWNSMIGG 279

Query: 591 C 591
           C
Sbjct: 280 C 280



 Score = 46.6 bits (109), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 40/164 (24%), Positives = 68/164 (41%), Gaps = 13/164 (7%)

Query: 27  QTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNE 86
           + HA  +  GF  D      L        A   AR LF  + K +L  + ++I G+  + 
Sbjct: 740 EIHAYALRRGFLEDSYASNALVDMYVKCGALLVARVLFDRLTKKNLISWTIMIAGYGMHG 799

Query: 87  MPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVG 146
             K +I  +  +R  + + PD  ++S +L    ACC    G+   G         +  + 
Sbjct: 800 FGKHAIALFEQMR-GSGIEPDAASFSAIL---YACCHS--GLAAEGRRFFKAMQKEYKIE 853

Query: 147 AAL------VDLYFKFSWVKSARKVFDKMP-EKDTVLWNSMISG 183
             L      VDL  +   +K A +  + MP E D+ +W S++ G
Sbjct: 854 PKLKHYTCIVDLLSRTGDLKEALEFIESMPIEPDSSIWVSLLHG 897


>gi|225432688|ref|XP_002282622.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g14850-like [Vitis vinifera]
          Length = 684

 Score =  458 bits (1179), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 264/685 (38%), Positives = 380/685 (55%), Gaps = 8/685 (1%)

Query: 104 LTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDL--FVGAALVDLYFKFSWVKS 161
           L+P++   S V SA S  C R +G   H   I+    + L  F+   LV++Y K     S
Sbjct: 4   LSPNSLA-SLVESAVSTQCSR-LGRAAHAQ-IIKTLDNPLPSFIYNHLVNMYSKLDRPNS 60

Query: 162 ARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVA 221
           A+ +    P +  V W ++I+G ++N  F  +++ F +M R+     D T   A   A  
Sbjct: 61  AQLLLSLTPNRSVVTWTALIAGSVQNGRFTSALFHFSNMRRDSIQPNDFTFPCA-FKASG 119

Query: 222 EVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNA 281
            ++   +G ++  L +K G    V+V       YSK G  E A  +F ++   ++ + NA
Sbjct: 120 SLRSPLVGKQVHALAVKAGQISDVFVGCSAFDMYSKAGLTEEARKMFDEMPERNIATWNA 179

Query: 282 MISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSG 341
            +S     G+ + +L  F +        N  T    +       +L L   +H F L+SG
Sbjct: 180 YLSNSVLEGRYDDALTAFIEFRHEGWEPNLITFCAFLNACAGASYLRLGRQLHGFVLQSG 239

Query: 342 IVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQ 401
             ++ SV   L   Y + +++  +  +F   S+ +  SW +MI  Y QN   E+A  +F 
Sbjct: 240 FEADVSVANGLIDFYGKCHQVGCSEIIFSGISKPNDVSWCSMIVSYVQNDEEEKACLVFL 299

Query: 402 EMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCG 461
             +   + P    VSS+LSACA L  + +GK VH L        NI+V +AL+DMY KCG
Sbjct: 300 RARKEGIEPTDFMVSSVLSACAGLSVLEVGKSVHTLAVKACVVGNIFVGSALVDMYGKCG 359

Query: 462 NIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIR--PSGVTFLSV 519
           +I +A   FD M  ++ VTWN MI GY   G    A+ LF EM     R  P+ VTF+ V
Sbjct: 360 SIEDAERAFDEMPERNLVTWNAMIGGYAHQGQADMAVTLFDEMTCGSHRVAPNYVTFVCV 419

Query: 520 LYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEP 579
           L ACS AG V  G EIF+SM   +G +P AEHYAC+VD+LGRAG +E+A +FIK + + P
Sbjct: 420 LSACSRAGSVNVGMEIFESMRGRYGIEPGAEHYACVVDLLGRAGMVEQAYQFIKKMPIRP 479

Query: 580 GPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQ 639
             +VWGALLGA  +   + L +VA++ LFELDP + G HVLLSN+++A   + +A  VR+
Sbjct: 480 TVSVWGALLGASKMFGKSELGKVAADNLFELDPLDSGNHVLLSNMFAAAGRWEEATLVRK 539

Query: 640 VVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVT 699
            +K   + K  GC+ I  G   HVF + D  H +++ I AML KL G+M  AG+  +T  
Sbjct: 540 EMKDVGIKKGAGCSWITAGNAVHVFQAKDTSHERNSEIQAMLAKLRGEMEAAGYIPDTSF 599

Query: 700 ALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTG 759
           AL D+EEEEK + +  HSEK+A+AFGLI+   G  IRI KNLR+C DCH+A KFIS + G
Sbjct: 600 ALFDLEEEEKAMEVWYHSEKIALAFGLISIPAGVPIRITKNLRICGDCHSAIKFISGIVG 659

Query: 760 RVIVVRDANRFHHFKGGVCSCGDYW 784
           R I+VRD N FH F+   CSC DYW
Sbjct: 660 REIIVRDNNLFHRFRDNQCSCRDYW 684



 Score =  201 bits (512), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 139/494 (28%), Positives = 246/494 (49%), Gaps = 12/494 (2%)

Query: 8   SRNLFLSLLKGA-KTQ-SQLTQT-HAQIIIHGFQNDLSTV--TKLAHRLSDFKATCYARA 62
           S N   SL++ A  TQ S+L +  HAQII     N L +     L +  S       A+ 
Sbjct: 5   SPNSLASLVESAVSTQCSRLGRAAHAQII-KTLDNPLPSFIYNHLVNMYSKLDRPNSAQL 63

Query: 63  LFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACC 122
           L    P   +  +  +I G   N    S++  ++++R+++ + P++FT+     A+ +  
Sbjct: 64  LLSLTPNRSVVTWTALIAGSVQNGRFTSALFHFSNMRRDS-IQPNDFTFPCAFKASGSLR 122

Query: 123 DRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMIS 182
              +G  +H  A+ +G  SD+FVG +  D+Y K    + ARK+FD+MPE++   WN+ +S
Sbjct: 123 SPLVGKQVHALAVKAGQISDVFVGCSAFDMYSKAGLTEEARKMFDEMPERNIATWNAYLS 182

Query: 183 GLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFH 242
             +    + D++  F +  R+ G   +  +  A L A A    LRLG ++    L+ GF 
Sbjct: 183 NSVLEGRYDDALTAFIEF-RHEGWEPNLITFCAFLNACAGASYLRLGRQLHGFVLQSGFE 241

Query: 243 DHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQL 302
             V V  GL+ FY KC +V  +E++F  I +P+ +S  +MI  Y  N + E +  +F + 
Sbjct: 242 ADVSVANGLIDFYGKCHQVGCSEIIFSGISKPNDVSWCSMIVSYVQNDEEEKACLVFLRA 301

Query: 303 LASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEM 362
                      +  ++        L +   +H+  +K+ +V N  V +AL  +Y +   +
Sbjct: 302 RKEGIEPTDFMVSSVLSACAGLSVLEVGKSVHTLAVKACVVGNIFVGSALVDMYGKCGSI 361

Query: 363 EAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQ--ASKVAPNPVTVSSILS 420
           E A + FDE  E++L +WNAMI GY   G  + A++LF EM   + +VAPN VT   +LS
Sbjct: 362 EDAERAFDEMPERNLVTWNAMIGGYAHQGQADMAVTLFDEMTCGSHRVAPNYVTFVCVLS 421

Query: 421 ACAQLGAISLGKWVHELVKSR-NFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEV 479
           AC++ G++++G  + E ++ R   E        ++D+  + G + +A +    M  +  V
Sbjct: 422 ACSRAGSVNVGMEIFESMRGRYGIEPGAEHYACVVDLLGRAGMVEQAYQFIKKMPIRPTV 481

Query: 480 T-WNTMISGYGLHG 492
           + W  ++    + G
Sbjct: 482 SVWGALLGASKMFG 495


>gi|15223594|ref|NP_176062.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75173061|sp|Q9FXB9.1|PPR84_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g56690, mitochondrial; Flags: Precursor
 gi|9954744|gb|AAG09095.1|AC009323_6 Hypothetical protein [Arabidopsis thaliana]
 gi|332195302|gb|AEE33423.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 704

 Score =  458 bits (1178), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 252/661 (38%), Positives = 376/661 (56%), Gaps = 33/661 (4%)

Query: 148 ALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMV-RNGGT 206
           ++V  YF     K AR++FD+M E++ V WN ++SG +KN    ++  VF  M  RN  +
Sbjct: 53  SIVSGYFSNGLPKEARQLFDEMSERNVVSWNGLVSGYIKNRMIVEARNVFELMPERNVVS 112

Query: 207 WLDSTSVAAVLPAVAEVQELRLGM----EIQCLGLKLGFHDH-----------------V 245
           W            V E + L   M    E+    +  G  D                  V
Sbjct: 113 WTAMVKGYMQEGMVGEAESLFWRMPERNEVSWTVMFGGLIDDGRIDKARKLYDMMPVKDV 172

Query: 246 YVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLAS 305
              T ++    + G V+ A L+F ++   ++++   MI+GY  N + + + +LF  +   
Sbjct: 173 VASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVMPEK 232

Query: 306 AERVNSSTIVGLIPVFYPFGHLH-LTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEA 364
            E   +S ++G    +   G +           +K  I  N+ ++      +  + E+  
Sbjct: 233 TEVSWTSMLLG----YTLSGRIEDAEEFFEVMPMKPVIACNAMIVG-----FGEVGEISK 283

Query: 365 ARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQ 424
           AR++FD   ++  A+W  MI  Y + G   EA+ LF +MQ   V P+  ++ SILS CA 
Sbjct: 284 ARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCAT 343

Query: 425 LGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTM 484
           L ++  G+ VH  +    F+ ++YV++ L+ MY KCG +V+A+ +FD  S K  + WN++
Sbjct: 344 LASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSI 403

Query: 485 ISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHG 544
           ISGY  HG G EAL++F EM  SG  P+ VT +++L ACS+AG + EG EIF+SM     
Sbjct: 404 ISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFC 463

Query: 545 FKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVAS 604
             P  EHY+C VD+LGRAGQ++KA+E I+ + ++P   VWGALLGAC  H   +LA VA+
Sbjct: 464 VTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALLGACKTHSRLDLAEVAA 523

Query: 605 EKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVF 664
           +KLFE +P+N G +VLLS+I ++   +   A VR+ ++   ++K PGC+ IEVG   H+F
Sbjct: 524 KKLFENEPDNAGTYVLLSSINASRSKWGDVAVVRKNMRTNNVSKFPGCSWIEVGKKVHMF 583

Query: 665 TSGD-QLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIA 723
           T G  + HP+   I  MLEK +G +REAG+  +    LHDV+EEEK   +  HSE+LA+A
Sbjct: 584 TRGGIKNHPEQAMILMMLEKTDGLLREAGYSPDCSHVLHDVDEEEKVDSLSRHSERLAVA 643

Query: 724 FGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDY 783
           +GL+    G  IR++KNLRVC DCH A K ISKVT R I++RDANRFHHF  G CSC DY
Sbjct: 644 YGLLKLPEGVPIRVMKNLRVCGDCHAAIKLISKVTEREIILRDANRFHHFNNGECSCRDY 703

Query: 784 W 784
           W
Sbjct: 704 W 704



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 116/490 (23%), Positives = 212/490 (43%), Gaps = 50/490 (10%)

Query: 50  RLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNF 109
           RLS       AR  F S+    +  +N I+ G+ +N +PK +   +  + +   ++ +  
Sbjct: 26  RLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSERNVVSWNGL 85

Query: 110 TYSFVLSAASACCDRSIGVLLHGHAIVS------GYGSDLFVGAALVDLYFKF------S 157
              ++ +       R++  L+    +VS      GY  +  VG A   L+++       S
Sbjct: 86  VSGYIKNRMIVEA-RNVFELMPERNVVSWTAMVKGYMQEGMVGEA-ESLFWRMPERNEVS 143

Query: 158 W------------VKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMV-RNG 204
           W            +  ARK++D MP KD V   +MI GL +     ++  +F +M  RN 
Sbjct: 144 WTVMFGGLIDDGRIDKARKLYDMMPVKDVVASTNMIGGLCREGRVDEARLIFDEMRERNV 203

Query: 205 GTWL---------DSTSVA----AVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVL--- 248
            TW          +   VA     V+P   EV    + +     G      +   V+   
Sbjct: 204 VTWTTMITGYRQNNRVDVARKLFEVMPEKTEVSWTSMLLGYTLSGRIEDAEEFFEVMPMK 263

Query: 249 -----TGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLL 303
                  ++  + + GE+ +A  +F  +   D  +   MI  Y   G    +L LF Q+ 
Sbjct: 264 PVIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQ 323

Query: 304 ASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEME 363
               R +  +++ ++ V      L     +H+  ++     +  V + L T+Y +  E+ 
Sbjct: 324 KQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELV 383

Query: 364 AARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACA 423
            A+ +FD  S K +  WN++I+GY  +GL EEA+ +F EM +S   PN VT+ +IL+AC+
Sbjct: 384 KAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACS 443

Query: 424 QLGAISLGKWVHELVKSR-NFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVT-W 481
             G +  G  + E ++S+      +   +  +DM  + G + +A EL + M+ K + T W
Sbjct: 444 YAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVW 503

Query: 482 NTMISGYGLH 491
             ++     H
Sbjct: 504 GALLGACKTH 513



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 84/341 (24%), Positives = 148/341 (43%), Gaps = 61/341 (17%)

Query: 252 VSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNS 311
           +S  S+ G++  A   F  +    + S N+++SGY  NG  + + +LF ++   +ER   
Sbjct: 24  ISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEM---SER--- 77

Query: 312 STIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDE 371
                              N +    L SG + N  ++               AR +F+ 
Sbjct: 78  -------------------NVVSWNGLVSGYIKNRMIV--------------EARNVFEL 104

Query: 372 SSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLG 431
             E+++ SW AM+ GY Q G+  EA SLF  M       N V+ + +       G I   
Sbjct: 105 MPERNVVSWTAMVKGYMQEGMVGEAESLFWRMPER----NEVSWTVMFGGLIDDGRIDKA 160

Query: 432 KWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLH 491
           + +++++  +    ++  ST +I    + G + EAR +FD M  ++ VTW TMI+GY  +
Sbjct: 161 RKLYDMMPVK----DVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQN 216

Query: 492 GHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEH 551
                A +LF  M       + V++ S+L   + +G + + +E F+ M       P+   
Sbjct: 217 NRVDVARKLFEVMPEK----TEVSWTSMLLGYTLSGRIEDAEEFFEVM-------PMKPV 265

Query: 552 YAC--MVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGA 590
            AC  M+   G  G++ KA      L  +   A W  ++ A
Sbjct: 266 IACNAMIVGFGEVGEISKARRVFD-LMEDRDNATWRGMIKA 305



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 57/241 (23%), Positives = 113/241 (46%), Gaps = 8/241 (3%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           AR +F  +   D   +  +I+ +        ++  +  ++K   + P   +   +LS  +
Sbjct: 284 ARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQ-GVRPSFPSLISILSVCA 342

Query: 120 ACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNS 179
                  G  +H H +   +  D++V + L+ +Y K   +  A+ VFD+   KD ++WNS
Sbjct: 343 TLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNS 402

Query: 180 MISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEI-QCLGLK 238
           +ISG   +   ++++ +F +M  + GT  +  ++ A+L A +   +L  G+EI + +  K
Sbjct: 403 IISGYASHGLGEEALKIFHEMP-SSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESK 461

Query: 239 LGFHDHVYVLTGLVSFYSKCGEVERA-ELLFRDIVRPDLISCNAMISGYTCNGKTESSLR 297
                 V   +  V    + G+V++A EL+    ++PD     A++    C  KT S L 
Sbjct: 462 FCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALLGA--C--KTHSRLD 517

Query: 298 L 298
           L
Sbjct: 518 L 518



 Score = 45.4 bits (106), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 25/70 (35%), Positives = 42/70 (60%), Gaps = 1/70 (1%)

Query: 436 ELVKSRNFESNIYVSTAL-IDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHG 494
           +L+  R + ++  V+ +  I   ++ G I EAR+ FD +  K+  +WN+++SGY  +G  
Sbjct: 5   KLILRRTYLTSTGVNCSFEISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLP 64

Query: 495 LEALQLFSEM 504
            EA QLF EM
Sbjct: 65  KEARQLFDEM 74


>gi|356540333|ref|XP_003538644.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g14820-like [Glycine max]
          Length = 721

 Score =  457 bits (1177), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 240/655 (36%), Positives = 369/655 (56%), Gaps = 33/655 (5%)

Query: 162 ARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVA 221
           A  +F  +P   T   N ++    +    ++++ ++  + RNG   LD  S   +L AV+
Sbjct: 68  ALSLFSHIPNPPTRFSNQLLRQFSRGPTPENTLSLYLHLRRNGFP-LDRFSFPPLLKAVS 126

Query: 222 EVQELRLGMEIQCLGLKLGF-HDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCN 280
           ++  L LG+EI  L  K GF H   ++ + L++ Y+ CG +  A  LF  +   D+++ N
Sbjct: 127 KLSALNLGLEIHGLASKFGFFHADPFIQSALIAMYAACGRIMDARFLFDKMSHRDVVTWN 186

Query: 281 AMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKS 340
            MI GY+ N   +  L+L+ ++  S    ++  +  ++      G+L     IH F   +
Sbjct: 187 IMIDGYSQNAHYDHVLKLYEEMKTSGTEPDAIILCTVLSACAHAGNLSYGKAIHQFIKDN 246

Query: 341 GIVSNSSVLTALSTVYS-------------------------------RLNEMEAARKLF 369
           G    S + T+L  +Y+                               +L  ++ AR +F
Sbjct: 247 GFRVGSHIQTSLVNMYANCGAMHLAREVYDQLPSKHMVVSTAMLSGYAKLGMVQDARFIF 306

Query: 370 DESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAIS 429
           D   EK L  W+AMI+GY ++    EA+ LF EMQ  ++ P+ +T+ S++SACA +GA+ 
Sbjct: 307 DRMVEKDLVCWSAMISGYAESYQPLEALQLFNEMQRRRIVPDQITMLSVISACANVGALV 366

Query: 430 LGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYG 489
             KW+H       F   + ++ ALIDMYAKCGN+V+ARE+F+ M  K+ ++W++MI+ + 
Sbjct: 367 QAKWIHTYADKNGFGRTLPINNALIDMYAKCGNLVKAREVFENMPRKNVISWSSMINAFA 426

Query: 490 LHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLA 549
           +HG    A+ LF  M    I P+GVTF+ VLYACSHAGLV EG + F SMI++H   P  
Sbjct: 427 MHGDADSAIALFHRMKEQNIEPNGVTFIGVLYACSHAGLVEEGQKFFSSMINEHRISPQR 486

Query: 550 EHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFE 609
           EHY CMVD+  RA  L KA+E I+ +   P   +WG+L+ AC  H +  L   A+ +L E
Sbjct: 487 EHYGCMVDLYCRANHLRKAMELIETMPFPPNVIIWGSLMSACQNHGEIELGEFAATRLLE 546

Query: 610 LDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQ 669
           L+P++ G  V+LSNIY+ E+ +     VR+++K + ++K   C+ IEV    HVF   D+
Sbjct: 547 LEPDHDGALVVLSNIYAKEKRWDDVGLVRKLMKHKGVSKEKACSRIEVNNEVHVFMMADR 606

Query: 670 LHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIAT 729
            H QS  IY  L+ +  +++  G+   T   L D+EEEEK+ ++  HSEKLA+ +GLI  
Sbjct: 607 YHKQSDEIYKKLDAVVSQLKLVGYTPSTSGILVDLEEEEKKEVVLWHSEKLALCYGLIGE 666

Query: 730 EPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
              + IRI+KNLR+C DCH+  K +SKV    IV+RD  RFHHF GG+CSC DYW
Sbjct: 667 RKESCIRIVKNLRICEDCHSFMKLVSKVHRIEIVMRDRTRFHHFNGGICSCRDYW 721



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 141/517 (27%), Positives = 236/517 (45%), Gaps = 41/517 (7%)

Query: 15  LLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDF-----KATCYARALFFSIPK 69
           LL   KT   + Q HAQI+     N    + KL             A  YA +LF  IP 
Sbjct: 18  LLASCKTLRHVKQIHAQILRSKMDNSNLLLLKLVLCCCTLPSPSPSALDYALSLFSHIPN 77

Query: 70  PDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVL 129
           P     N ++R FS    P++++  Y HLR+N     D F++  +L A S     ++G+ 
Sbjct: 78  PPTRFSNQLLRQFSRGPTPENTLSLYLHLRRN-GFPLDRFSFPPLLKAVSKLSALNLGLE 136

Query: 130 LHGHAIVSG-YGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNC 188
           +HG A   G + +D F+ +AL+ +Y     +  AR +FDKM  +D V WN MI G  +N 
Sbjct: 137 IHGLASKFGFFHADPFIQSALIAMYAACGRIMDARFLFDKMSHRDVVTWNIMIDGYSQNA 196

Query: 189 CFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCL----GLKLGFH-- 242
            +   + ++ +M +  GT  D+  +  VL A A    L  G  I       G ++G H  
Sbjct: 197 HYDHVLKLYEEM-KTSGTEPDAIILCTVLSACAHAGNLSYGKAIHQFIKDNGFRVGSHIQ 255

Query: 243 -------------------------DHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLI 277
                                     H+ V T ++S Y+K G V+ A  +F  +V  DL+
Sbjct: 256 TSLVNMYANCGAMHLAREVYDQLPSKHMVVSTAMLSGYAKLGMVQDARFIFDRMVEKDLV 315

Query: 278 SCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFC 337
             +AMISGY  + +   +L+LF ++       +  T++ +I      G L     IH++ 
Sbjct: 316 CWSAMISGYAESYQPLEALQLFNEMQRRRIVPDQITMLSVISACANVGALVQAKWIHTYA 375

Query: 338 LKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAI 397
            K+G      +  AL  +Y++   +  AR++F+    K++ SW++MI  +  +G  + AI
Sbjct: 376 DKNGFGRTLPINNALIDMYAKCGNLVKAREVFENMPRKNVISWSSMINAFAMHGDADSAI 435

Query: 398 SLFQEMQASKVAPNPVTVSSILSACAQLGAISLG-KWVHELVKSRNFESNIYVSTALIDM 456
           +LF  M+   + PN VT   +L AC+  G +  G K+   ++              ++D+
Sbjct: 436 ALFHRMKEQNIEPNGVTFIGVLYACSHAGLVEEGQKFFSSMINEHRISPQREHYGCMVDL 495

Query: 457 YAKCGNIVEARELFDLMSHKSEV-TWNTMISGYGLHG 492
           Y +  ++ +A EL + M     V  W +++S    HG
Sbjct: 496 YCRANHLRKAMELIETMPFPPNVIIWGSLMSACQNHG 532



 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 69/215 (32%), Positives = 111/215 (51%), Gaps = 2/215 (0%)

Query: 362 MEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSA 421
           ++ A  LF           N ++  +++    E  +SL+  ++ +    +  +   +L A
Sbjct: 65  LDYALSLFSHIPNPPTRFSNQLLRQFSRGPTPENTLSLYLHLRRNGFPLDRFSFPPLLKA 124

Query: 422 CAQLGAISLGKWVHELV-KSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVT 480
            ++L A++LG  +H L  K   F ++ ++ +ALI MYA CG I++AR LFD MSH+  VT
Sbjct: 125 VSKLSALNLGLEIHGLASKFGFFHADPFIQSALIAMYAACGRIMDARFLFDKMSHRDVVT 184

Query: 481 WNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMI 540
           WN MI GY  + H    L+L+ EM  SG  P  +   +VL AC+HAG +  G  I Q  I
Sbjct: 185 WNIMIDGYSQNAHYDHVLKLYEEMKTSGTEPDAIILCTVLSACAHAGNLSYGKAIHQ-FI 243

Query: 541 HDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGL 575
            D+GF+  +     +V++    G +  A E    L
Sbjct: 244 KDNGFRVGSHIQTSLVNMYANCGAMHLAREVYDQL 278



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 119/512 (23%), Positives = 204/512 (39%), Gaps = 83/512 (16%)

Query: 6   PQSRNLFLSLLKGAKTQSQLTQTHAQIIIHG-------FQNDLSTVTKLAHRLSDFKATC 58
           P  R  F  LLK     S+L+  +  + IHG       F  D    + L    +      
Sbjct: 112 PLDRFSFPPLLKAV---SKLSALNLGLEIHGLASKFGFFHADPFIQSALIAMYAACGRIM 168

Query: 59  YARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAA 118
            AR LF  +   D+  +N++I G+S N      +  Y  + K +   PD      VLSA 
Sbjct: 169 DARFLFDKMSHRDVVTWNIMIDGYSQNAHYDHVLKLYEEM-KTSGTEPDAIILCTVLSAC 227

Query: 119 SACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMP-------- 170
           +   + S G  +H     +G+     +  +LV++Y     +  AR+V+D++P        
Sbjct: 228 AHAGNLSYGKAIHQFIKDNGFRVGSHIQTSLVNMYANCGAMHLAREVYDQLPSKHMVVST 287

Query: 171 -----------------------EKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTW 207
                                  EKD V W++MISG  ++    +++ +F +M R     
Sbjct: 288 AMLSGYAKLGMVQDARFIFDRMVEKDLVCWSAMISGYAESYQPLEALQLFNEMQRR-RIV 346

Query: 208 LDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELL 267
            D  ++ +V+ A A V  L     I     K GF   + +   L+  Y+KCG + +A  +
Sbjct: 347 PDQITMLSVISACANVGALVQAKWIHTYADKNGFGRTLPINNALIDMYAKCGNLVKAREV 406

Query: 268 FRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHL 327
           F ++ R ++IS ++MI+ +  +G  +S++ LF ++       N  T +G+          
Sbjct: 407 FENMPRKNVISWSSMINAFAMHGDADSAIALFHRMKEQNIEPNGVTFIGV---------- 456

Query: 328 HLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGY 387
            L  C H+  ++ G    SS++        R                     +  M+  Y
Sbjct: 457 -LYACSHAGLVEEGQKFFSSMINEHRISPQR-------------------EHYGCMVDLY 496

Query: 388 TQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNI 447
            +     +A+ L + M      PN +   S++SAC   G I LG    E   +R  E   
Sbjct: 497 CRANHLRKAMELIETM---PFPPNVIIWGSLMSACQNHGEIELG----EFAATRLLELEP 549

Query: 448 YVSTALI---DMYAKCGNIVEARELFDLMSHK 476
               AL+   ++YAK     +   +  LM HK
Sbjct: 550 DHDGALVVLSNIYAKEKRWDDVGLVRKLMKHK 581


>gi|356498282|ref|XP_003517982.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g02980-like [Glycine max]
          Length = 609

 Score =  457 bits (1177), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 228/579 (39%), Positives = 353/579 (60%), Gaps = 8/579 (1%)

Query: 210 STSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSK---CGEVERAEL 266
           S+S+ +++P    ++EL+   +IQ   +K    ++  VLT L++F +       ++ A  
Sbjct: 35  SSSILSLIPKCTSLRELK---QIQAYTIK-THQNNPTVLTKLINFCTSNPTIASMDHAHR 90

Query: 267 LFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGH 326
           +F  I +PD++  N M  GY        ++ L  Q+L S    +  T   L+        
Sbjct: 91  MFDKIPQPDIVLFNTMARGYARFDDPLRAILLCSQVLCSGLLPDDYTFSSLLKACARLKA 150

Query: 327 LHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAG 386
           L     +H   +K G+  N  V   L  +Y+  N+++AAR++FD+  E  + ++NA+I  
Sbjct: 151 LEEGKQLHCLAVKLGVGDNMYVCPTLINMYTACNDVDAARRVFDKIGEPCVVAYNAIITS 210

Query: 387 YTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESN 446
             +N    EA++LF+E+Q S + P  VT+   LS+CA LGA+ LG+W+HE VK   F+  
Sbjct: 211 CARNSRPNEALALFRELQESGLKPTDVTMLVALSSCALLGALDLGRWIHEYVKKNGFDQY 270

Query: 447 IYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLH 506
           + V+TALIDMYAKCG++ +A  +F  M  +    W+ MI  Y  HGHG +A+ +  EM  
Sbjct: 271 VKVNTALIDMYAKCGSLDDAVSVFKDMPRRDTQAWSAMIVAYATHGHGSQAISMLREMKK 330

Query: 507 SGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLE 566
           + ++P  +TFL +LYACSH GLV EG E F SM H++G  P  +HY CM+D+LGRAG+LE
Sbjct: 331 AKVQPDEITFLGILYACSHTGLVEEGYEYFHSMTHEYGIVPSIKHYGCMIDLLGRAGRLE 390

Query: 567 KALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYS 626
           +A +FI  L ++P P +W  LL +C  H +  +A++  +++FELD  + G +V+LSN+ +
Sbjct: 391 EACKFIDELPIKPTPILWRTLLSSCSSHGNVEMAKLVIQRIFELDDSHGGDYVILSNLCA 450

Query: 627 AERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNG 686
               +     +R+++  +   K PGC+ IEV    H F SGD +H  ST ++  L++L  
Sbjct: 451 RNGRWDDVNHLRKMMVDKGALKVPGCSSIEVNNVVHEFFSGDGVHSTSTILHHALDELVK 510

Query: 687 KMREAGFQTETVTALH-DVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCL 745
           +++ AG+  +T    + D+E+EEKE++++ HSEKLAI +GL+ T PGT IR++KNLRVC+
Sbjct: 511 ELKLAGYVPDTSLVFYADIEDEEKEIVLRYHSEKLAITYGLLNTPPGTTIRVVKNLRVCV 570

Query: 746 DCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           DCH A KFIS + GR I++RD  RFHHFK G CSCGDYW
Sbjct: 571 DCHNAAKFISLIFGRQIILRDVQRFHHFKDGKCSCGDYW 609



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 97/336 (28%), Positives = 172/336 (51%), Gaps = 7/336 (2%)

Query: 162 ARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIW--VFGDMVRNGGTWLDSTSVAAVLPA 219
           A ++FDK+P+ D VL+N+M  G  +   F D +   +    V   G   D  + +++L A
Sbjct: 88  AHRMFDKIPQPDIVLFNTMARGYAR---FDDPLRAILLCSQVLCSGLLPDDYTFSSLLKA 144

Query: 220 VAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISC 279
            A ++ L  G ++ CL +KLG  D++YV   L++ Y+ C +V+ A  +F  I  P +++ 
Sbjct: 145 CARLKALEEGKQLHCLAVKLGVGDNMYVCPTLINMYTACNDVDAARRVFDKIGEPCVVAY 204

Query: 280 NAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLK 339
           NA+I+    N +   +L LFR+L  S  +    T++  +      G L L   IH +  K
Sbjct: 205 NAIITSCARNSRPNEALALFRELQESGLKPTDVTMLVALSSCALLGALDLGRWIHEYVKK 264

Query: 340 SGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISL 399
           +G      V TAL  +Y++   ++ A  +F +   +   +W+AMI  Y  +G   +AIS+
Sbjct: 265 NGFDQYVKVNTALIDMYAKCGSLDDAVSVFKDMPRRDTQAWSAMIVAYATHGHGSQAISM 324

Query: 400 FQEMQASKVAPNPVTVSSILSACAQLGAISLG-KWVHELVKSRNFESNIYVSTALIDMYA 458
            +EM+ +KV P+ +T   IL AC+  G +  G ++ H +        +I     +ID+  
Sbjct: 325 LREMKKAKVQPDEITFLGILYACSHTGLVEEGYEYFHSMTHEYGIVPSIKHYGCMIDLLG 384

Query: 459 KCGNIVEARELFDLMSHK-SEVTWNTMISGYGLHGH 493
           + G + EA +  D +  K + + W T++S    HG+
Sbjct: 385 RAGRLEEACKFIDELPIKPTPILWRTLLSSCSSHGN 420



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 116/446 (26%), Positives = 209/446 (46%), Gaps = 45/446 (10%)

Query: 2   SMKTPQSRNLFLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSD---FKATC 58
           +++ P S    LSL+    +  +L Q  A   I   QN+ + +TKL +  +      +  
Sbjct: 30  ALEPPSSS--ILSLIPKCTSLRELKQIQA-YTIKTHQNNPTVLTKLINFCTSNPTIASMD 86

Query: 59  YARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAA 118
           +A  +F  IP+PD+ LFN + RG++  + P  +I   + +   + L PD++T+S +L A 
Sbjct: 87  HAHRMFDKIPQPDIVLFNTMARGYARFDDPLRAILLCSQVL-CSGLLPDDYTFSSLLKAC 145

Query: 119 SACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWN 178
           +       G  LH  A+  G G +++V   L+++Y   + V +AR+VFDK+ E   V +N
Sbjct: 146 ARLKALEEGKQLHCLAVKLGVGDNMYVCPTLINMYTACNDVDAARRVFDKIGEPCVVAYN 205

Query: 179 SMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLK 238
           ++I+   +N    +++ +F ++  +G    D T + A L + A +  L LG  I     K
Sbjct: 206 AIITSCARNSRPNEALALFRELQESGLKPTDVTMLVA-LSSCALLGALDLGRWIHEYVKK 264

Query: 239 LGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRL 298
            GF  +V V T L+  Y+KCG ++ A  +F+D+ R D  + +AMI  Y  +G    ++ +
Sbjct: 265 NGFDQYVKVNTALIDMYAKCGSLDDAVSVFKDMPRRDTQAWSAMIVAYATHGHGSQAISM 324

Query: 299 FRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSR 358
            R++  +  + +  T +G+           L  C H+  ++ G              Y  
Sbjct: 325 LREMKKAKVQPDEITFLGI-----------LYACSHTGLVEEG--------------YEY 359

Query: 359 LNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSI 418
            + M     +       S+  +  MI    + G  EEA     E+    + P P+   ++
Sbjct: 360 FHSMTHEYGIV-----PSIKHYGCMIDLLGRAGRLEEACKFIDEL---PIKPTPILWRTL 411

Query: 419 LSACAQLGAISLGKWVHELVKSRNFE 444
           LS+C+  G + + K    LV  R FE
Sbjct: 412 LSSCSSHGNVEMAK----LVIQRIFE 433


>gi|125543632|gb|EAY89771.1| hypothetical protein OsI_11313 [Oryza sativa Indica Group]
          Length = 798

 Score =  457 bits (1177), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 248/663 (37%), Positives = 388/663 (58%), Gaps = 35/663 (5%)

Query: 148 ALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGL-------------MKNCCFQDSI 194
           AL+  YF+     +A  +F +MP +D   +N++ISGL             + +  F  S+
Sbjct: 53  ALLAGYFRNRLPDAALGLFRRMPSRDLASYNALISGLSLRRQTLPDAAAALASIPFPPSV 112

Query: 195 WVFGDMVR---NGGTWLDSTSVAAVLPAVAEVQELRL--GM-------EIQCLGLKLGFH 242
             F  ++R     G   D+  +   +P    V    L  G+       E + L  ++   
Sbjct: 113 VSFTSLLRGYVRHGLLADAIRLFQQMPERNHVSYTVLLGGLLDAGRVNEARRLFDEMPDR 172

Query: 243 DHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQL 302
           D V   T ++S Y + G +  A  LF ++ + +++S  AMISGY  NG+   + +LF  +
Sbjct: 173 D-VVAWTAMLSGYCQAGRITEARALFDEMPKRNVVSWTAMISGYAQNGEVNLARKLFEVM 231

Query: 303 LASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEM 362
               E   ++ +VG I      GH+     + +   +  + + ++++      + +   +
Sbjct: 232 PERNEVSWTAMLVGYIQA----GHVEDAAELFNAMPEHPVAACNAMMVG----FGQRGMV 283

Query: 363 EAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSAC 422
           +AA+ +F++  E+   +W+AMI  Y QN    EA+S F+EM    V PN  +V SIL+ C
Sbjct: 284 DAAKTVFEKMRERDDGTWSAMIKAYEQNEFLMEALSTFREMLWRGVRPNYPSVISILTVC 343

Query: 423 AQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWN 482
           A L  +  G+ VH  +   +F+ +++  +ALI MY KCGN+ +A+ +F     K  V WN
Sbjct: 344 AALAVLDYGREVHAAMLRCSFDMDVFAVSALITMYIKCGNLDKAKRVFHTFEPKDIVMWN 403

Query: 483 TMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHD 542
           +MI+GY  HG G +AL +F +M  +G+ P G+T++  L ACS+ G V+EG EIF SM  +
Sbjct: 404 SMITGYAQHGLGEQALGIFHDMRLAGMSPDGITYIGALTACSYTGKVKEGREIFNSMTVN 463

Query: 543 HGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARV 602
              +P AEHY+CMVD+LGR+G +E+A + IK + VEP   +WGAL+GAC +H++  +A V
Sbjct: 464 SSIRPGAEHYSCMVDLLGRSGLVEEAFDLIKNMPVEPDAVIWGALMGACRMHRNAEIAEV 523

Query: 603 ASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPH 662
           A++KL EL+P N G +VLLS+IY++   +  A+ +R+ +  R L K+PGC+ IE     H
Sbjct: 524 AAKKLLELEPGNAGPYVLLSHIYTSVGRWEDASKMRKFISSRNLNKSPGCSWIEYDKRVH 583

Query: 663 VFTSGDQL-HPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLA 721
           +FTSGD L HP+  AI  +LEKL+G + E+G+  +    LHD++EE+K   ++ HSE+ A
Sbjct: 584 LFTSGDVLAHPEHAAILRILEKLDGLLMESGYSADGSFVLHDIDEEQKSHSLRYHSERQA 643

Query: 722 IAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCG 781
           +A+GL+    G  IR++KNLRVC DCH+A K I+K+T R IV+RDANRFHHFK G CSC 
Sbjct: 644 VAYGLLKIPEGMPIRVMKNLRVCGDCHSAIKLIAKITSREIVLRDANRFHHFKDGFCSCR 703

Query: 782 DYW 784
           DYW
Sbjct: 704 DYW 706



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 109/469 (23%), Positives = 209/469 (44%), Gaps = 46/469 (9%)

Query: 39  NDLSTVTKLAHRLSDFKATCY-ARALFFSIP-KPDLFLFNVIIRGFSNNEMPKSSICFYT 96
            DL++   L   LS  + T   A A   SIP  P +  F  ++RG+  + +   +I  + 
Sbjct: 77  RDLASYNALISGLSLRRQTLPDAAAALASIPFPPSVVSFTSLLRGYVRHGLLADAIRLFQ 136

Query: 97  HLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGY-------GSDLFVGAAL 149
            + +      ++ +Y+ +L           G LL    +             D+    A+
Sbjct: 137 QMPER-----NHVSYTVLL-----------GGLLDAGRVNEARRLFDEMPDRDVVAWTAM 180

Query: 150 VDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMV-RNGGTWL 208
           +  Y +   +  AR +FD+MP+++ V W +MISG  +N     +  +F  M  RN  +W 
Sbjct: 181 LSGYCQAGRITEARALFDEMPKRNVVSWTAMISGYAQNGEVNLARKLFEVMPERNEVSW- 239

Query: 209 DSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDH-VYVLTGLVSFYSKCGEVERAELL 267
                 A+L     V  ++ G       L     +H V     ++  + + G V+ A+ +
Sbjct: 240 -----TAML-----VGYIQAGHVEDAAELFNAMPEHPVAACNAMMVGFGQRGMVDAAKTV 289

Query: 268 FRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHL 327
           F  +   D  + +AMI  Y  N     +L  FR++L    R N  +++ ++ V      L
Sbjct: 290 FEKMRERDDGTWSAMIKAYEQNEFLMEALSTFREMLWRGVRPNYPSVISILTVCAALAVL 349

Query: 328 HLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGY 387
                +H+  L+     +   ++AL T+Y +   ++ A+++F     K +  WN+MI GY
Sbjct: 350 DYGREVHAAMLRCSFDMDVFAVSALITMYIKCGNLDKAKRVFHTFEPKDIVMWNSMITGY 409

Query: 388 TQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNI 447
            Q+GL E+A+ +F +M+ + ++P+ +T    L+AC+  G +  G+   E+  S    S+I
Sbjct: 410 AQHGLGEQALGIFHDMRLAGMSPDGITYIGALTACSYTGKVKEGR---EIFNSMTVNSSI 466

Query: 448 YVS----TALIDMYAKCGNIVEARELFDLMSHKSE-VTWNTMISGYGLH 491
                  + ++D+  + G + EA +L   M  + + V W  ++    +H
Sbjct: 467 RPGAEHYSCMVDLLGRSGLVEEAFDLIKNMPVEPDAVIWGALMGACRMH 515



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 86/350 (24%), Positives = 161/350 (46%), Gaps = 72/350 (20%)

Query: 252 VSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNS 311
           ++  ++ G +E A   F  +      S NA+++GY  N   +++L LFR++ +      +
Sbjct: 24  IAHLARAGNIEGARAAFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSRDLASYN 83

Query: 312 STIVGL------IP--------VFYPFGHLHLTNCIHSFCLKSGIVSNS----------- 346
           + I GL      +P        + +P   +  T+ +  + ++ G+++++           
Sbjct: 84  ALISGLSLRRQTLPDAAAALASIPFPPSVVSFTSLLRGY-VRHGLLADAIRLFQQMPERN 142

Query: 347 ----SVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQE 402
               +VL        R+NE   AR+LFDE  ++ + +W AM++GY Q G   EA +LF E
Sbjct: 143 HVSYTVLLGGLLDAGRVNE---ARRLFDEMPDRDVVAWTAMLSGYCQAGRITEARALFDE 199

Query: 403 MQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGN 462
           M    V    V+ ++++S  AQ G ++L + + E++  RN  S     TA++  Y + G+
Sbjct: 200 MPKRNV----VSWTAMISGYAQNGEVNLARKLFEVMPERNEVS----WTAMLVGYIQAGH 251

Query: 463 IVEARELFDLMS-------------------------------HKSEVTWNTMISGYGLH 491
           + +A ELF+ M                                 + + TW+ MI  Y  +
Sbjct: 252 VEDAAELFNAMPEHPVAACNAMMVGFGQRGMVDAAKTVFEKMRERDDGTWSAMIKAYEQN 311

Query: 492 GHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIH 541
              +EAL  F EML  G+RP+  + +S+L  C+   ++  G E+  +M+ 
Sbjct: 312 EFLMEALSTFREMLWRGVRPNYPSVISILTVCAALAVLDYGREVHAAMLR 361


>gi|297798134|ref|XP_002866951.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312787|gb|EFH43210.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 630

 Score =  457 bits (1177), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 234/559 (41%), Positives = 339/559 (60%), Gaps = 29/559 (5%)

Query: 255 YSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTI 314
           Y+  G++  +  LF   + PDL    A I+  + NG  + +  L+ QLL+S    N  T 
Sbjct: 72  YASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSQINPNEFTF 131

Query: 315 VGLIPVFY----PFGHLHL------------TNCIHSFCLKSGIVSNSSVL--------- 349
             ++           H H+            T  +  +     +VS   V          
Sbjct: 132 SSILKSCSTKSGKLIHTHVLKFGLGLDPYVATGLVDIYAKGGDVVSAQKVFDRMPERSLV 191

Query: 350 --TALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQAS- 406
             TA+ T Y++   +EAAR LFD   E+ + SWN MI GY+Q+G   +A+ LFQ++ A  
Sbjct: 192 SSTAMITCYAKQGNVEAARALFDRMCERDIVSWNVMIDGYSQHGFPSDALMLFQKLLADG 251

Query: 407 KVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEA 466
           K  P+ +TV + LSAC+Q+GA+  G+W+H  V S     N+ V TALIDMY+KCG++ EA
Sbjct: 252 KPKPDEITVVAALSACSQIGALETGRWIHVFVNSSRIRLNVKVCTALIDMYSKCGSLEEA 311

Query: 467 RELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLH-SGIRPSGVTFLSVLYACSH 525
             +F+    K  V WN MI+GY +HG+  +AL+LF EM   +G++P+ +TF+  L AC+H
Sbjct: 312 VLVFNDTPRKDIVAWNAMITGYAMHGYSQDALRLFDEMQGITGLQPTDITFIGTLQACAH 371

Query: 526 AGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWG 585
           AGLV EG +IF+SM  ++G KP  EHY C+V +LGRAGQL++A E IK + +E    +W 
Sbjct: 372 AGLVNEGIQIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYEIIKNMNMEADSVLWS 431

Query: 586 ALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRK 645
           ++LG+C +H +  L +  +E L   +  N G +VLLSNIY+   DY   A VR ++K++ 
Sbjct: 432 SVLGSCKLHGEFMLGKEIAEYLIGQNISNSGIYVLLSNIYALVGDYEGVAKVRNLMKEKG 491

Query: 646 LAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVE 705
           + K PG + IE+    H F +GD+ H +S  IY ML K++ +++  G+   T T LHD+E
Sbjct: 492 IVKEPGISTIEIDNKVHEFRAGDREHLKSKEIYTMLRKMSERIKSHGYVPNTNTVLHDLE 551

Query: 706 EEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVR 765
           E EKE  ++VHSE+LAIA+GLI+T+PG+ ++I KNLRVC DCHT TK ISK+TGR IV+R
Sbjct: 552 ETEKERSLQVHSERLAIAYGLISTKPGSPLKIFKNLRVCSDCHTVTKLISKITGRKIVMR 611

Query: 766 DANRFHHFKGGVCSCGDYW 784
           D NRFHHF  G CSC D+W
Sbjct: 612 DRNRFHHFSDGSCSCDDFW 630



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 136/513 (26%), Positives = 218/513 (42%), Gaps = 75/513 (14%)

Query: 2   SMKTPQSRNLFLSLLKGAKTQSQLTQTHAQIIIHGF--QNDLSTVTKLAHR-LSDFKATC 58
           S + P    L +  +  + +  ++ Q HA I+ H          +    HR  +      
Sbjct: 21  SFRNPPPEKLAV-FIDNSHSVDEVLQIHAAILRHNLLIHPRYPVLNLKLHRAYASHGKIR 79

Query: 59  YARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAA 118
           ++ ALF     PDLFLF   I   S N +   +   Y  L  ++ + P+ FT+S +L + 
Sbjct: 80  HSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLL-SSQINPNEFTFSSILKS- 137

Query: 119 SACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMP-------- 170
              C    G L+H H +  G G D +V   LVD+Y K   V SA+KVFD+MP        
Sbjct: 138 ---CSTKSGKLIHTHVLKFGLGLDPYVATGLVDIYAKGGDVVSAQKVFDRMPERSLVSST 194

Query: 171 -----------------------EKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTW 207
                                  E+D V WN MI G  ++    D++ +F  ++ +G   
Sbjct: 195 AMITCYAKQGNVEAARALFDRMCERDIVSWNVMIDGYSQHGFPSDALMLFQKLLADGKPK 254

Query: 208 LDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELL 267
            D  +V A L A +++  L  G  I           +V V T L+  YSKCG +E A L+
Sbjct: 255 PDEITVVAALSACSQIGALETGRWIHVFVNSSRIRLNVKVCTALIDMYSKCGSLEEAVLV 314

Query: 268 FRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHL 327
           F D  R D+++ NAMI+GY  +G ++ +LRLF ++           I GL P    F   
Sbjct: 315 FNDTPRKDIVAWNAMITGYAMHGYSQDALRLFDEM---------QGITGLQPTDITFIGT 365

Query: 328 HLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGY 387
            L  C H+  +  GI     +  ++   Y    ++E                +  +++  
Sbjct: 366 -LQACAHAGLVNEGI----QIFESMGQEYGIKPKIE---------------HYGCLVSLL 405

Query: 388 TQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNF-ESN 446
            + G  + A  + + M    +  + V  SS+L +C   G   LGK + E +  +N   S 
Sbjct: 406 GRAGQLKRAYEIIKNMN---MEADSVLWSSVLGSCKLHGEFMLGKEIAEYLIGQNISNSG 462

Query: 447 IYVSTALIDMYAKCGNIVEARELFDLMSHKSEV 479
           IYV   L ++YA  G+     ++ +LM  K  V
Sbjct: 463 IYV--LLSNIYALVGDYEGVAKVRNLMKEKGIV 493



 Score = 99.8 bits (247), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 73/275 (26%), Positives = 123/275 (44%), Gaps = 38/275 (13%)

Query: 352 LSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPN 411
           L   Y+   ++  +  LF ++ +  L  + A I   + NGL ++A  L+ ++ +S++ PN
Sbjct: 68  LHRAYASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSQINPN 127

Query: 412 PVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVE------ 465
             T SSIL +C+       GK +H  V       + YV+T L+D+YAK G++V       
Sbjct: 128 EFTFSSILKSCSTKS----GKLIHTHVLKFGLGLDPYVATGLVDIYAKGGDVVSAQKVFD 183

Query: 466 -------------------------ARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQL 500
                                    AR LFD M  +  V+WN MI GY  HG   +AL L
Sbjct: 184 RMPERSLVSSTAMITCYAKQGNVEAARALFDRMCERDIVSWNVMIDGYSQHGFPSDALML 243

Query: 501 FSEMLHSG-IRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDIL 559
           F ++L  G  +P  +T ++ L ACS  G +  G  I    ++    +   +    ++D+ 
Sbjct: 244 FQKLLADGKPKPDEITVVAALSACSQIGALETGRWI-HVFVNSSRIRLNVKVCTALIDMY 302

Query: 560 GRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIH 594
            + G LE+A+  +           W A++    +H
Sbjct: 303 SKCGSLEEAV-LVFNDTPRKDIVAWNAMITGYAMH 336


>gi|58743498|gb|AAW81739.1| Putative Putative Pentatricopeptide (PPR) repeat-containing protein
           [Brassica oleracea]
          Length = 968

 Score =  457 bits (1177), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 262/736 (35%), Positives = 404/736 (54%), Gaps = 16/736 (2%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNT---ALTPDNFTYSFVLS 116
           A  +F  +P+ +L  +N +IR FS+N + +        + +     A TPD  T + VL 
Sbjct: 238 ALRVFKIMPERNLVSWNSMIRVFSDNGLSEECFLLLGQMMEKDDEIAFTPDVATLATVLP 297

Query: 117 AASACCDRSIGVL--LHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDT 174
             +   DR IGV   +HG A+      ++ V  AL+D+Y K   +  A+ +F     K+ 
Sbjct: 298 VCAR--DREIGVGKGVHGLAMKLSLDKEVVVNNALMDMYSKCGCINDAQVIFKLNNNKNV 355

Query: 175 VLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTW-LDSTSVAAVLPAVAEVQELRLGMEIQ 233
           V WN+M+ G         +  +   M+  GG    D  ++   +P   E   L    E+ 
Sbjct: 356 VSWNTMVGGFSAAGDIHKTFDLLRQMLAGGGDLRADEVTILNAVPVCFEESVLPNLKELH 415

Query: 234 CLGLKLGF-HDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKT 292
           C  LK  F H++  V    V+ Y+KCG +  A  +F  I    + S NA+I GY+ +   
Sbjct: 416 CYSLKQEFVHNNELVANAFVASYAKCGSLSYAHRVFCSIRSKTVNSWNALIGGYSQSSDP 475

Query: 293 ESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTAL 352
             SL  + Q+ +S    +  T+  L+        L L   +H   +++ +  +S V  +L
Sbjct: 476 RLSLDAYFQMKSSGLLPDLFTVCSLLSACSQIKSLKLGKEVHGLIIRNRLERDSFVYISL 535

Query: 353 STVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNP 412
            ++Y    E+  A  LFD   +K+L SWN M+ GY QNG  E A+SLF++M    V P  
Sbjct: 536 LSLYIHCGELSTAHVLFDAMEDKTLVSWNTMVNGYLQNGFPERALSLFRQMVLYGVQPCE 595

Query: 413 VTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDL 472
           +++ S+  AC+ L ++ LG+  H        E N +++ ++IDMYAK G+++E+ ++F+ 
Sbjct: 596 ISMMSVFGACSLLPSLRLGREAHGYALKCLLEDNAFIACSVIDMYAKNGSVMESFKVFNG 655

Query: 473 MSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREG 532
           +  +S  +WN M+ GYG+HG   EA++LF EM  +G  P  +TFL VL AC+H+GLV EG
Sbjct: 656 LKERSVASWNAMVMGYGIHGRAKEAIKLFEEMQRTGHCPDELTFLGVLTACNHSGLVHEG 715

Query: 533 DEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEF-IKGLAVEPGPAVWGALLGAC 591
                 M    G  P  +HYAC++D+L RAG+L++AL+   + ++ EPG  +W  LL +C
Sbjct: 716 LTYLDQMKTLFGMNPTLKHYACVIDMLVRAGKLDEALKIATEEMSEEPGVGIWNFLLSSC 775

Query: 592 MIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPG 651
            IHK+  +    + KLF  +PE    +VLLSN+Y+    + +   VRQ +K+  L K  G
Sbjct: 776 RIHKNLEMGEKIAAKLFVSEPEKPENYVLLSNLYAGSGKWDEVRKVRQRMKEMSLRKDAG 835

Query: 652 CTLIEVGGTPHVFTSGDQL---HPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEE 708
           C+ IE+ G    F +G+       +  +++++LE+  GKM   G++ +T +  HD+ EEE
Sbjct: 836 CSWIELNGKVFSFVAGESSLDGFEEIKSLWSVLEREIGKM---GYRPDTSSVQHDLSEEE 892

Query: 709 KELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDAN 768
           K   ++ HSEKLAI +GLI T  GT +R+ KNLR+C+DCH A K ISKV  R IVVRD  
Sbjct: 893 KTEQLRGHSEKLAITYGLIRTSEGTTLRVYKNLRICVDCHNAAKLISKVMEREIVVRDNK 952

Query: 769 RFHHFKGGVCSCGDYW 784
           RFHHFK G CSCGDYW
Sbjct: 953 RFHHFKNGFCSCGDYW 968



 Score =  276 bits (707), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 175/589 (29%), Positives = 296/589 (50%), Gaps = 18/589 (3%)

Query: 18  GAKTQSQLTQTHAQIIIHG--FQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLF 75
           G +   QL +   Q++       ND    T++    S   +   +R++F ++ K +LF +
Sbjct: 92  GRRKDIQLGRKIHQLVSESARLSNDDVLCTRVITMYSMCGSPDDSRSVFDALRKKNLFQW 151

Query: 76  NVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAI 135
           N +I  +S NE+  + +  +  +   + L PDNFT+  V+ A +   +  +G+ +HG  +
Sbjct: 152 NAVISSYSRNELYHNVLEMFVKMITESGLLPDNFTFPCVVKACAGVSEVQVGLAVHGLVV 211

Query: 136 VSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIW 195
            +    D+FV  ALV  Y     V  A +VF  MPE++ V WNSMI     N   ++   
Sbjct: 212 KTRLVEDVFVSNALVSFYGTNGSVSDALRVFKIMPERNLVSWNSMIRVFSDNGLSEECFL 271

Query: 196 VFGDMVRNGGTWL---DSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLV 252
           + G M+          D  ++A VLP  A  +E+ +G  +  L +KL     V V   L+
Sbjct: 272 LLGQMMEKDDEIAFTPDVATLATVLPVCARDREIGVGKGVHGLAMKLSLDKEVVVNNALM 331

Query: 253 SFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAE--RVN 310
             YSKCG +  A+++F+     +++S N M+ G++  G    +  L RQ+LA     R +
Sbjct: 332 DMYSKCGCINDAQVIFKLNNNKNVVSWNTMVGGFSAAGDIHKTFDLLRQMLAGGGDLRAD 391

Query: 311 SSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSS-VLTALSTVYSRLNEMEAARKLF 369
             TI+  +PV +    L     +H + LK   V N+  V  A    Y++   +  A ++F
Sbjct: 392 EVTILNAVPVCFEESVLPNLKELHCYSLKQEFVHNNELVANAFVASYAKCGSLSYAHRVF 451

Query: 370 DESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAIS 429
                K++ SWNA+I GY+Q+     ++  + +M++S + P+  TV S+LSAC+Q+ ++ 
Sbjct: 452 CSIRSKTVNSWNALIGGYSQSSDPRLSLDAYFQMKSSGLLPDLFTVCSLLSACSQIKSLK 511

Query: 430 LGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYG 489
           LGK VH L+     E + +V  +L+ +Y  CG +  A  LFD M  K+ V+WNTM++GY 
Sbjct: 512 LGKEVHGLIIRNRLERDSFVYISLLSLYIHCGELSTAHVLFDAMEDKTLVSWNTMVNGYL 571

Query: 490 LHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLA 549
            +G    AL LF +M+  G++P  ++ +SV  ACS    +R G E      H +  K L 
Sbjct: 572 QNGFPERALSLFRQMVLYGVQPCEISMMSVFGACSLLPSLRLGRE-----AHGYALKCLL 626

Query: 550 EHYA----CMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIH 594
           E  A     ++D+  + G + ++ +   GL  E   A W A++    IH
Sbjct: 627 EDNAFIACSVIDMYAKNGSVMESFKVFNGLK-ERSVASWNAMVMGYGIH 674



 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 88/322 (27%), Positives = 160/322 (49%), Gaps = 26/322 (8%)

Query: 219 AVAEVQELRLGMEI-QCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLI 277
           A    ++++LG +I Q +       +   + T +++ YS CG  + +  +F  + + +L 
Sbjct: 90  ASGRRKDIQLGRKIHQLVSESARLSNDDVLCTRVITMYSMCGSPDDSRSVFDALRKKNLF 149

Query: 278 SCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPF----------GHL 327
             NA+IS Y+ N    + L +F +++  +         GL+P  + F            +
Sbjct: 150 QWNAVISSYSRNELYHNVLEMFVKMITES---------GLLPDNFTFPCVVKACAGVSEV 200

Query: 328 HLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGY 387
            +   +H   +K+ +V +  V  AL + Y     +  A ++F    E++L SWN+MI  +
Sbjct: 201 QVGLAVHGLVVKTRLVEDVFVSNALVSFYGTNGSVSDALRVFKIMPERNLVSWNSMIRVF 260

Query: 388 TQNGLTEEAISLFQEMQASK----VAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNF 443
           + NGL+EE   L  +M          P+  T++++L  CA+   I +GK VH L    + 
Sbjct: 261 SDNGLSEECFLLLGQMMEKDDEIAFTPDVATLATVLPVCARDREIGVGKGVHGLAMKLSL 320

Query: 444 ESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSE 503
           +  + V+ AL+DMY+KCG I +A+ +F L ++K+ V+WNTM+ G+   G   +   L  +
Sbjct: 321 DKEVVVNNALMDMYSKCGCINDAQVIFKLNNNKNVVSWNTMVGGFSAAGDIHKTFDLLRQ 380

Query: 504 MLHSG--IRPSGVTFLSVLYAC 523
           ML  G  +R   VT L+ +  C
Sbjct: 381 MLAGGGDLRADEVTILNAVPVC 402



 Score =  112 bits (281), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 106/425 (24%), Positives = 189/425 (44%), Gaps = 47/425 (11%)

Query: 59  YARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAA 118
           YA  +F SI    +  +N +I G+S +  P+ S+  Y  + K++ L PD FT   +LSA 
Sbjct: 446 YAHRVFCSIRSKTVNSWNALIGGYSQSSDPRLSLDAYFQM-KSSGLLPDLFTVCSLLSAC 504

Query: 119 SACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWN 178
           S      +G  +HG  I +    D FV  +L+ LY     + +A  +FD M +K  V WN
Sbjct: 505 SQIKSLKLGKEVHGLIIRNRLERDSFVYISLLSLYIHCGELSTAHVLFDAMEDKTLVSWN 564

Query: 179 SMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLK 238
           +M++G ++N   + ++ +F  MV  G    +  S+ +V  A + +  LRLG E     LK
Sbjct: 565 TMVNGYLQNGFPERALSLFRQMVLYGVQPCE-ISMMSVFGACSLLPSLRLGREAHGYALK 623

Query: 239 LGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRL 298
               D+ ++   ++  Y+K G V  +  +F  +    + S NAM+ GY  +G+ + +++L
Sbjct: 624 CLLEDNAFIACSVIDMYAKNGSVMESFKVFNGLKERSVASWNAMVMGYGIHGRAKEAIKL 683

Query: 299 FRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSR 358
           F ++  +    +  T +G+           LT C HS                   V+  
Sbjct: 684 FEEMQRTGHCPDELTFLGV-----------LTACNHS-----------------GLVHEG 715

Query: 359 LNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSI 418
           L  ++  + LF      +L  +  +I    + G  +EA+ +  E  + +  P     + +
Sbjct: 716 LTYLDQMKTLF--GMNPTLKHYACVIDMLVRAGKLDEALKIATEEMSEE--PGVGIWNFL 771

Query: 419 LSACAQLGAISLGK------WVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDL 472
           LS+C     + +G+      +V E  K  N+         L ++YA  G   E R++   
Sbjct: 772 LSSCRIHKNLEMGEKIAAKLFVSEPEKPENY-------VLLSNLYAGSGKWDEVRKVRQR 824

Query: 473 MSHKS 477
           M   S
Sbjct: 825 MKEMS 829



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 77/285 (27%), Positives = 132/285 (46%), Gaps = 12/285 (4%)

Query: 327 LHLTNCIHSFCLKSGIVSNSSVL-TALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIA 385
           + L   IH    +S  +SN  VL T + T+YS     + +R +FD   +K+L  WNA+I+
Sbjct: 97  IQLGRKIHQLVSESARLSNDDVLCTRVITMYSMCGSPDDSRSVFDALRKKNLFQWNAVIS 156

Query: 386 GYTQNGLTEEAISLFQEM-QASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFE 444
            Y++N L    + +F +M   S + P+  T   ++ ACA +  + +G  VH LV      
Sbjct: 157 SYSRNELYHNVLEMFVKMITESGLLPDNFTFPCVVKACAGVSEVQVGLAVHGLVVKTRLV 216

Query: 445 SNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEM 504
            +++VS AL+  Y   G++ +A  +F +M  ++ V+WN+MI  +  +G   E   L  +M
Sbjct: 217 EDVFVSNALVSFYGTNGSVSDALRVFKIMPERNLVSWNSMIRVFSDNGLSEECFLLLGQM 276

Query: 505 LHS----GIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILG 560
           +         P   T  +VL  C+    +  G  +    +     K +  + A M D+  
Sbjct: 277 MEKDDEIAFTPDVATLATVLPVCARDREIGVGKGVHGLAMKLSLDKEVVVNNALM-DMYS 335

Query: 561 RAGQLEKALEFIKGLAVEPGPAVWGALLG----ACMIHKDTNLAR 601
           + G +  A + I  L        W  ++G    A  IHK  +L R
Sbjct: 336 KCGCINDA-QVIFKLNNNKNVVSWNTMVGGFSAAGDIHKTFDLLR 379


>gi|147789959|emb|CAN73858.1| hypothetical protein VITISV_024322 [Vitis vinifera]
          Length = 1539

 Score =  457 bits (1177), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 271/770 (35%), Positives = 426/770 (55%), Gaps = 14/770 (1%)

Query: 25   LTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSN 84
            L Q  A++   GF  DL   + L    + F  T  A+ +F  +   ++   N ++ G   
Sbjct: 774  LEQMLARVEKSGFLQDLYVGSALVSGFARFGLTDDAKNIFEQMGVRNVVSMNGLMVGLVK 833

Query: 85   NEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACC----DRSIGVLLHGHAIVSGYG 140
             +  +++   +  ++    +  D  +Y  +LSA S        R  G  +H H I +G  
Sbjct: 834  QKQGEAAAKVFHEMKDLVGINSD--SYVVLLSAFSEFSVLEEGRRKGREVHAHVIRTGLN 891

Query: 141  SD-LFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGD 199
             + + +G  LV++Y K   +  A  VF+ M EKD+V WNS+ISGL +N C +D+   F  
Sbjct: 892  DNKVAIGNGLVNMYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAESFLR 951

Query: 200  MVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCG 259
            M R  G+   + ++ + L + A +  + LG +I C GLKLG    V V   L++ Y++ G
Sbjct: 952  M-RRTGSMPSNFTLISTLSSCASLGWIMLGEQIHCDGLKLGLDTDVSVSNALLALYAETG 1010

Query: 260  EVERAELLFRDIVRPDLISCNAMISGYT-CNGKTESSLRLFRQLLASAERVNSSTIVGLI 318
                   +F  +   D +S N++I   +        +++ F +++     ++  T + ++
Sbjct: 1011 CFTECLKVFSLMPEYDQVSWNSVIGALSDSEASVSQAVKYFLEMMRGGWGLSRVTFINIL 1070

Query: 319  PVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSE-KSL 377
                      +++ IH+  LK  +  ++++  AL + Y +  EM    K+F   SE +  
Sbjct: 1071 SAVSSLSLHEVSHQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDE 1130

Query: 378  ASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHEL 437
             SWN+MI+GY  N L  +A+ L   M       +  T +++LSACA +  +  G  VH  
Sbjct: 1131 VSWNSMISGYIHNELLHKAMDLVWFMMQKGQRLDSFTFATVLSACASVATLERGMEVHAC 1190

Query: 438  VKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEA 497
                  ES++ V +AL+DMY+KCG I  A   F+LM  ++  +WN+MISGY  HGHG +A
Sbjct: 1191 GIRACMESDVVVGSALVDMYSKCGRIDYASRFFELMPLRNVYSWNSMISGYARHGHGEKA 1250

Query: 498  LQLFSEMLHSGIRPSGVT-FLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMV 556
            L+LF+ M+  G  P  V   L VL ACSH G V EG E F+SM   +   P  EH++CMV
Sbjct: 1251 LKLFTRMMLDGQPPDHVAPLLGVLSACSHVGFVEEGFEHFKSMSEVYRLSPRVEHFSCMV 1310

Query: 557  DILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIH--KDTNLARVASEKLFELDPEN 614
            D+LGRAG+L++  +FI  + ++P   +W  +LGAC     ++T L R A+E L EL+P+N
Sbjct: 1311 DLLGRAGKLDEVGDFINSMPMKPNVLIWRTVLGACCRANGRNTELGRRAAEMLLELEPQN 1370

Query: 615  VGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQS 674
               +VLL+N+Y++   +   A  R  +K+  + K  GC+ + +    HVF +GD+LHP+ 
Sbjct: 1371 AVNYVLLANMYASGEKWEDVAKARXAMKEAAVKKEAGCSWVTMKDGVHVFVAGDKLHPEK 1430

Query: 675  TAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTE 734
              IY  L +LN KMR+AG+  +T  AL D+E E KE ++  HSEK+A+AF ++  +    
Sbjct: 1431 DXIYDKLRELNRKMRDAGYIPQTKYALFDLELENKEELLSYHSEKIAVAF-VLTRQSALP 1489

Query: 735  IRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
            IRI+KNLRVC DCH+A  +ISK+ GR IV+RD+NRFHHF+ G CSCGDYW
Sbjct: 1490 IRIMKNLRVCGDCHSAFGYISKIVGRQIVLRDSNRFHHFEDGKCSCGDYW 1539



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 133/497 (26%), Positives = 226/497 (45%), Gaps = 35/497 (7%)

Query: 64  FFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRK-----NTALTPDNFTYSFVLSAA 118
           F + P P L   +++ +  + N+  KS      H +      NT L   + T+  +++  
Sbjct: 497 FTASPFPPLK--SLLFKPLNPNQCTKSLQDLVDHYKTSTSHCNTTLFSSSETFESLINRY 554

Query: 119 SACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWN 178
              C       LH  +I  G+  +LF+   L+++Y +   + SA+K+FD+M  ++ V W 
Sbjct: 555 QGSCCSEEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWA 614

Query: 179 SMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEV--QELRLGMEIQCLG 236
            +ISG  +N    ++   F DMVR  G   +  +  + L A  E      +LG++I  L 
Sbjct: 615 CLISGYTQNGKPDEACARFRDMVR-AGFIPNHYAFGSALRACQESGPSGCKLGVQIHGLI 673

Query: 237 LKLGFHDHVYVLTGLVSFYSKC-GEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESS 295
            K  +   V V   L+S Y  C      A  +F  I   + IS N++IS Y+  G   S+
Sbjct: 674 SKTRYGSDVVVCNVLISMYGSCLDSANDARSVFDRIGIRNSISWNSIISVYSRRGDXVSA 733

Query: 296 LRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIH---SFCL---------KSGIV 343
             LF  +    E +  S      P  Y FG L    C       C+         KSG +
Sbjct: 734 YDLFSSM--QKEGLGFS----FKPNEYTFGSLITAACSSVDFGLCVLEQMLARVEKSGFL 787

Query: 344 SNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEM 403
            +  V +AL + ++R    + A+ +F++   +++ S N ++ G  +    E A  +F EM
Sbjct: 788 QDLYVGSALVSGFARFGLTDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEAAAKVFHEM 847

Query: 404 QASKVAPNPVTVSSILSACAQLGAIS----LGKWVHELVKSRNFESN-IYVSTALIDMYA 458
           +   V  N  +   +LSA ++   +      G+ VH  V       N + +   L++MYA
Sbjct: 848 K-DLVGINSDSYVVLLSAFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYA 906

Query: 459 KCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLS 518
           K G I +A  +F+LM  K  V+WN++ISG   +    +A + F  M  +G  PS  T +S
Sbjct: 907 KSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAESFLRMRRTGSMPSNFTLIS 966

Query: 519 VLYACSHAGLVREGDEI 535
            L +C+  G +  G++I
Sbjct: 967 TLSSCASLGWIMLGEQI 983



 Score =  122 bits (305), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 89/300 (29%), Positives = 146/300 (48%), Gaps = 12/300 (4%)

Query: 333 IHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGL 392
           +H   +K G V N  +   L  +Y R+ ++ +A+KLFDE S ++L +W  +I+GYTQNG 
Sbjct: 566 LHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISGYTQNGK 625

Query: 393 TEEAISLFQEMQASKVAPNPVTVSSILSACAQLG--AISLGKWVHELVKSRNFESNIYVS 450
            +EA + F++M  +   PN     S L AC + G     LG  +H L+    + S++ V 
Sbjct: 626 PDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKLGVQIHGLISKTRYGSDVVVC 685

Query: 451 TALIDMYAKC-GNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGI 509
             LI MY  C  +  +AR +FD +  ++ ++WN++IS Y   G  + A  LFS M   G+
Sbjct: 686 NVLISMYGSCLDSANDARSVFDRIGIRNSISWNSIISVYSRRGDXVSAYDLFSSMQKEGL 745

Query: 510 ----RPSGVTFLSVLY-ACSHAGLVREGDEIFQSMIHDHGFKPLAEHY--ACMVDILGRA 562
               +P+  TF S++  ACS         E   + +   GF  L + Y  + +V    R 
Sbjct: 746 GFSFKPNEYTFGSLITAACSSVDFGLCVLEQMLARVEKSGF--LQDLYVGSALVSGFARF 803

Query: 563 GQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLS 622
           G  + A    + + V    ++ G ++G     +    A+V  E    +   +  Y VLLS
Sbjct: 804 GLTDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEAAAKVFHEMKDLVGINSDSYVVLLS 863


>gi|359482590|ref|XP_002284545.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Vitis vinifera]
          Length = 648

 Score =  457 bits (1177), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 233/574 (40%), Positives = 345/574 (60%), Gaps = 1/574 (0%)

Query: 211 TSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRD 270
           ++ A++L +    + ++ G ++       GF     + T LV+ Y  C  +  A LLF  
Sbjct: 76  SNYASLLQSCIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCDSLSSARLLFDR 135

Query: 271 IVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLT 330
           I + ++   N +I GY  NG  E++++L+ Q+       ++ T   ++        +   
Sbjct: 136 IPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACAALSAIEHG 195

Query: 331 NCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQN 390
             IH   +++G   +  V  AL  +Y++   + +AR++FD+   +    WN+M+A Y+QN
Sbjct: 196 REIHEHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVRDAVLWNSMLAAYSQN 255

Query: 391 GLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVS 450
           G  +  +SL  EM  + + P   T+ + +SA A   A+  G+ +H L   + FES+  V 
Sbjct: 256 GHPDACLSLCSEMVLTGLRPTEATLVTAISASADNAALPQGRELHGLSWRQEFESHDKVK 315

Query: 451 TALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIR 510
           TAL+DMYAKCG++  AR LF+ +  K  V+WN MI+GY +HGH  EAL LF EM +   +
Sbjct: 316 TALVDMYAKCGSVRVARNLFERLGVKRVVSWNAMITGYAMHGHATEALDLFEEM-NRVAK 374

Query: 511 PSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALE 570
           P  +TF+ VL ACSH GL+ EG   F++MI D+   P  +HY CMVD+LG +G+L++A  
Sbjct: 375 PDHITFVGVLSACSHGGLLEEGWMFFETMIRDYKIDPTVQHYTCMVDLLGHSGRLDEAYN 434

Query: 571 FIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERD 630
            I  + V P   VWGALL +C IH +  L  +A E+L EL+P++ G +V+LSNIY+    
Sbjct: 435 LIMQMKVLPDSGVWGALLNSCKIHANVELGEIALERLIELEPDDAGNYVILSNIYAQAGK 494

Query: 631 YLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMRE 690
           +   A +R+++  R+L K+  C+ IEV    H F SGD  HP S  IY+ LE++ G M+E
Sbjct: 495 WEGVAKLRKLMTDRRLKKSIACSWIEVKNKVHAFLSGDTSHPLSDEIYSELERVGGLMKE 554

Query: 691 AGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTA 750
           AG+   T +  HDVE++EK  M+  HSE+LAIAFGLI+T PGT + I KNLR+C DCH A
Sbjct: 555 AGYSPSTGSVFHDVEDDEKANMVCSHSERLAIAFGLISTPPGTRLLITKNLRICEDCHVA 614

Query: 751 TKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
            KFISK+T R I VRD NR+HHFK GVCSCGDYW
Sbjct: 615 IKFISKITEREITVRDVNRYHHFKDGVCSCGDYW 648



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 144/476 (30%), Positives = 232/476 (48%), Gaps = 43/476 (9%)

Query: 5   TPQSRNLFLSLLKGAKTQSQLT---QTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYAR 61
           TP   N + SLL+    +  +    Q HAQ+ + GF  D    TKL +      +   AR
Sbjct: 72  TPTYSN-YASLLQSCIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCDSLSSAR 130

Query: 62  ALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASAC 121
            LF  IPK ++FL+NV+IRG++ N   ++++  Y  +  +  L PDNFT+ FVL A +A 
Sbjct: 131 LLFDRIPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQMF-DYGLVPDNFTFPFVLKACAAL 189

Query: 122 CDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMI 181
                G  +H H + +G+  D+FVGAAL+D+Y K   V SAR+VFDK+  +D VLWNSM+
Sbjct: 190 SAIEHGREIHEHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVRDAVLWNSML 249

Query: 182 SGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGF 241
           +   +N      + +  +MV  G    ++T V A+  A A+   L  G E+  L  +  F
Sbjct: 250 AAYSQNGHPDACLSLCSEMVLTGLRPTEATLVTAI-SASADNAALPQGRELHGLSWRQEF 308

Query: 242 HDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQ 301
             H  V T LV  Y+KCG V  A  LF  +    ++S NAMI+GY  +G    +L LF +
Sbjct: 309 ESHDKVKTALVDMYAKCGSVRVARNLFERLGVKRVVSWNAMITGYAMHGHATEALDLFEE 368

Query: 302 LLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNE 361
           +   A + +  T VG+           L+ C H   L+ G +   +++            
Sbjct: 369 MNRVA-KPDHITFVGV-----------LSACSHGGLLEEGWMFFETMIR----------- 405

Query: 362 MEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSA 421
                   D   + ++  +  M+     +G  +EA +L  +M   KV P+     ++L++
Sbjct: 406 --------DYKIDPTVQHYTCMVDLLGHSGRLDEAYNLIMQM---KVLPDSGVWGALLNS 454

Query: 422 CAQLGAISLGKWVHE-LVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHK 476
           C     + LG+   E L++    ++  YV   L ++YA+ G      +L  LM+ +
Sbjct: 455 CKIHANVELGEIALERLIELEPDDAGNYV--ILSNIYAQAGKWEGVAKLRKLMTDR 508



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 131/471 (27%), Positives = 223/471 (47%), Gaps = 20/471 (4%)

Query: 32  IIIHGFQNDLSTVTKLAHRLSDFKATCYAR-ALFFSIPKPDLFLFNVIIRGFSNNEMPKS 90
           +++H F+  L   +  +   S  K T +A  +L +  P P    F      F NN+    
Sbjct: 1   MLLH-FKRKLKRPSPCSALSSLLKPTFFASLSLQYQSPNPS---FTSSAPQFDNNQTHLK 56

Query: 91  SI--CFYTHLRKNTALTPDNFTYSFVLSAASACCDRSI---GVLLHGHAIVSGYGSDLFV 145
           +I  C   H  ++T LTP   TYS   S   +C  R     G  LH    ++G+G D  +
Sbjct: 57  AIPSCSNPH-AESTCLTP---TYSNYASLLQSCIARKAIKPGKQLHAQVCLAGFGFDTVI 112

Query: 146 GAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGG 205
              LV+LY     + SAR +FD++P+ +  LWN +I G   N  ++ ++ ++  M  + G
Sbjct: 113 ATKLVNLYCVCDSLSSARLLFDRIPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQMF-DYG 171

Query: 206 TWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAE 265
              D+ +   VL A A +  +  G EI    ++ G+   V+V   L+  Y+KCG V  A 
Sbjct: 172 LVPDNFTFPFVLKACAALSAIEHGREIHEHVVQTGWEKDVFVGAALIDMYAKCGCVGSAR 231

Query: 266 LLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFG 325
            +F  I+  D +  N+M++ Y+ NG  ++ L L  +++ +  R   +T+V  I       
Sbjct: 232 EVFDKILVRDAVLWNSMLAAYSQNGHPDACLSLCSEMVLTGLRPTEATLVTAISASADNA 291

Query: 326 HLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIA 385
            L     +H    +    S+  V TAL  +Y++   +  AR LF+    K + SWNAMI 
Sbjct: 292 ALPQGRELHGLSWRQEFESHDKVKTALVDMYAKCGSVRVARNLFERLGVKRVVSWNAMIT 351

Query: 386 GYTQNGLTEEAISLFQEMQASKVA-PNPVTVSSILSACAQLGAISLGKWVHE-LVKSRNF 443
           GY  +G   EA+ LF+EM  ++VA P+ +T   +LSAC+  G +  G    E +++    
Sbjct: 352 GYAMHGHATEALDLFEEM--NRVAKPDHITFVGVLSACSHGGLLEEGWMFFETMIRDYKI 409

Query: 444 ESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEV-TWNTMISGYGLHGH 493
           +  +   T ++D+    G + EA  L   M    +   W  +++   +H +
Sbjct: 410 DPTVQHYTCMVDLLGHSGRLDEAYNLIMQMKVLPDSGVWGALLNSCKIHAN 460



 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 51/187 (27%), Positives = 91/187 (48%), Gaps = 2/187 (1%)

Query: 404 QASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNI 463
           +++ + P     +S+L +C    AI  GK +H  V    F  +  ++T L+++Y  C ++
Sbjct: 67  ESTCLTPTYSNYASLLQSCIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCDSL 126

Query: 464 VEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYAC 523
             AR LFD +   +   WN +I GY  +G    A+QL+ +M   G+ P   TF  VL AC
Sbjct: 127 SSARLLFDRIPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKAC 186

Query: 524 SHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAV 583
           +    +  G EI + ++   G++      A ++D+  + G +  A E    + V     +
Sbjct: 187 AALSAIEHGREIHEHVVQT-GWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVRDA-VL 244

Query: 584 WGALLGA 590
           W ++L A
Sbjct: 245 WNSMLAA 251


>gi|297821407|ref|XP_002878586.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297324425|gb|EFH54845.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 786

 Score =  457 bits (1177), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 258/699 (36%), Positives = 385/699 (55%), Gaps = 69/699 (9%)

Query: 153 YFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTS 212
           Y K   + S+ + FD++P++D+V W +MI G      +  +I + G+M+R G       +
Sbjct: 90  YAKRGDMDSSCEFFDRLPQRDSVSWTTMIVGYKNIGQYHKAIRIMGEMMREG-IEPSQFT 148

Query: 213 VAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIV 272
           +  VL +VA  + L  G ++    +KLG   +V V   L++ Y+KCG+   A+++F  +V
Sbjct: 149 LTNVLASVAATRCLETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKVVFDRMV 208

Query: 273 -------------------------------RPDLISCNAMISGYTCNGKTESSLRLFRQ 301
                                            D+++ N+MISGY   G    +L +F +
Sbjct: 209 VKDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGYNQRGYDLRALDMFSK 268

Query: 302 LLA-SAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSR-- 358
           +L  S    +  T+  ++        L +   IHS  + +G   +  VL AL ++YSR  
Sbjct: 269 MLRDSMLSPDRFTLASVLSACANLEKLCIGEQIHSHIVTTGFDISGIVLNALISMYSRCG 328

Query: 359 -------------------------------LNEMEAARKLFDESSEKSLASWNAMIAGY 387
                                          L +M  A+ +FD   ++ + +W AMI GY
Sbjct: 329 GVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNEAKNIFDSLKDRDVVAWTAMIVGY 388

Query: 388 TQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVH-ELVKSRNFESN 446
            Q+GL  EAI+LF+ M   +  PN  T++++LS  + L ++  GK +H   VKS    S 
Sbjct: 389 EQHGLYGEAINLFRSMVGEEQRPNSYTLAAMLSVASSLASLGHGKQIHGSAVKSGEIYS- 447

Query: 447 IYVSTALIDMYAKCGNIVEARELFDLMS-HKSEVTWNTMISGYGLHGHGLEALQLFSEML 505
           + VS ALI MYAK G+I  A   FDL+   +  V+W +MI     HGH  EAL+LF  ML
Sbjct: 448 VSVSNALITMYAKAGSITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETML 507

Query: 506 HSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQL 565
             G+RP  +T++ V  AC+HAGLV +G + F  M       P   HYACMVD+ GRAG L
Sbjct: 508 MEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLL 567

Query: 566 EKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIY 625
           ++A EFI+ + +EP    WG+LL AC ++K+ +L +VA+E+L  L+PEN G +  L+N+Y
Sbjct: 568 QEAQEFIEKMPIEPDVVTWGSLLSACRVYKNIDLGKVAAERLLLLEPENSGAYSALANLY 627

Query: 626 SAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLN 685
           SA   + +AA +R+ +K  ++ K  G + IEV    H F   D +HPQ   IY  ++K+ 
Sbjct: 628 SACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHAFGVEDGIHPQKNEIYITMKKIW 687

Query: 686 GKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCL 745
            ++++ G+  +T + LHD+EEE KE +++ HSEKLAIAFGLI+T   T +RI+KNLRVC 
Sbjct: 688 DEIKKMGYVPDTASVLHDLEEEVKEQILRHHSEKLAIAFGLISTPDKTTLRIMKNLRVCN 747

Query: 746 DCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           DCHTA KFISK+ GR I+VRD  RFHHFK G CSC DYW
Sbjct: 748 DCHTAIKFISKLVGREIIVRDTTRFHHFKDGFCSCRDYW 786



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 127/513 (24%), Positives = 224/513 (43%), Gaps = 71/513 (13%)

Query: 42  STVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKN 101
           +TV     +  D  ++C     F  +P+ D   +  +I G+ N      +I     + + 
Sbjct: 84  NTVLSAYAKRGDMDSSC---EFFDRLPQRDSVSWTTMIVGYKNIGQYHKAIRIMGEMMRE 140

Query: 102 TALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKS 161
             + P  FT + VL++ +A      G  +H   +  G   ++ V  +L+++Y K      
Sbjct: 141 -GIEPSQFTLTNVLASVAATRCLETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMM 199

Query: 162 ARKVFDKM-------------------------------PEKDTVLWNSMISGLMKNCCF 190
           A+ VFD+M                                E+D V WNSMISG  +    
Sbjct: 200 AKVVFDRMVVKDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGYNQRGYD 259

Query: 191 QDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTG 250
             ++ +F  M+R+     D  ++A+VL A A +++L +G +I    +  GF     VL  
Sbjct: 260 LRALDMFSKMLRDSMLSPDRFTLASVLSACANLEKLCIGEQIHSHIVTTGFDISGIVLNA 319

Query: 251 LVSFYSKCGEVERAELL---------------------------------FRDIVRPDLI 277
           L+S YS+CG VE A  L                                 F  +   D++
Sbjct: 320 LISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNEAKNIFDSLKDRDVV 379

Query: 278 SCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFC 337
           +  AMI GY  +G    ++ LFR ++   +R NS T+  ++ V      L     IH   
Sbjct: 380 AWTAMIVGYEQHGLYGEAINLFRSMVGEEQRPNSYTLAAMLSVASSLASLGHGKQIHGSA 439

Query: 338 LKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDE-SSEKSLASWNAMIAGYTQNGLTEEA 396
           +KSG + + SV  AL T+Y++   + +A + FD    E+   SW +MI    Q+G  EEA
Sbjct: 440 VKSGEIYSVSVSNALITMYAKAGSITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEA 499

Query: 397 ISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRN-FESNIYVSTALID 455
           + LF+ M    + P+ +T   + SAC   G ++ G+   +++K  +     +     ++D
Sbjct: 500 LELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVD 559

Query: 456 MYAKCGNIVEARELFDLMSHKSE-VTWNTMISG 487
           ++ + G + EA+E  + M  + + VTW +++S 
Sbjct: 560 LFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSA 592



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 119/492 (24%), Positives = 195/492 (39%), Gaps = 115/492 (23%)

Query: 232 IQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGK 291
           + C  +K G    VY++  L++ YSK G    A  LF ++      S N ++S Y   G 
Sbjct: 36  VHCRVIKSGLVFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYAKRGD 95

Query: 292 TESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLH--------------------LTN 331
            +SS   F +L        ++ IVG    +   G  H                    LTN
Sbjct: 96  MDSSCEFFDRLPQRDSVSWTTMIVG----YKNIGQYHKAIRIMGEMMREGIEPSQFTLTN 151

Query: 332 C---------------IHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKS 376
                           +HSF +K G+  N SV  +L  +Y++  +   A+ +FD    K 
Sbjct: 152 VLASVAATRCLETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKVVFDRMVVKD 211

Query: 377 LASWNAMIA-------------------------------GYTQNGLTEEAISLFQEM-Q 404
           ++SWNAMIA                               GY Q G    A+ +F +M +
Sbjct: 212 ISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGYNQRGYDLRALDMFSKMLR 271

Query: 405 ASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKC---- 460
            S ++P+  T++S+LSACA L  + +G+ +H  + +  F+ +  V  ALI MY++C    
Sbjct: 272 DSMLSPDRFTLASVLSACANLEKLCIGEQIHSHIVTTGFDISGIVLNALISMYSRCGGVE 331

Query: 461 -----------------------------GNIVEARELFDLMSHKSEVTWNTMISGYGLH 491
                                        G++ EA+ +FD +  +  V W  MI GY  H
Sbjct: 332 TARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNEAKNIFDSLKDRDVVAWTAMIVGYEQH 391

Query: 492 GHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEH 551
           G   EA+ LF  M+    RP+  T  ++L   S    +  G +I  S +       ++  
Sbjct: 392 GLYGEAINLFRSMVGEEQRPNSYTLAAMLSVASSLASLGHGKQIHGSAVKSGEIYSVSVS 451

Query: 552 YACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFE-- 609
            A ++ +  +AG +  A      +  E     W +++ A   H     A     +LFE  
Sbjct: 452 NA-LITMYAKAGSITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEAL----ELFETM 506

Query: 610 ----LDPENVGY 617
               L P+++ Y
Sbjct: 507 LMEGLRPDHITY 518



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 117/483 (24%), Positives = 208/483 (43%), Gaps = 90/483 (18%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           A A F  + + D+  +N +I G++       ++  ++ + +++ L+PD FT + VLSA +
Sbjct: 231 AMAQFEQMAERDIVTWNSMISGYNQRGYDLRALDMFSKMLRDSMLSPDRFTLASVLSACA 290

Query: 120 ACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARK--------------- 164
                 IG  +H H + +G+     V  AL+ +Y +   V++AR+               
Sbjct: 291 NLEKLCIGEQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGF 350

Query: 165 ------------------VFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGT 206
                             +FD + ++D V W +MI G  ++  + ++I +F  MV     
Sbjct: 351 TALLDGYIKLGDMNEAKNIFDSLKDRDVVAWTAMIVGYEQHGLYGEAINLFRSMVGEEQR 410

Query: 207 WLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAEL 266
             +S ++AA+L   + +  L  G +I    +K G    V V   L++ Y+K G +  A  
Sbjct: 411 -PNSYTLAAMLSVASSLASLGHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGSITSASR 469

Query: 267 LFRDIVR--PDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPF 324
            F D++R   D +S  +MI     +G  E +L LF  +L    R +  T VG        
Sbjct: 470 AF-DLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVG-------- 520

Query: 325 GHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSE-----KSLAS 379
                   + S C  +G+V+                     R+ FD   +      +L+ 
Sbjct: 521 --------VFSACTHAGLVNQ-------------------GRQYFDMMKDVDKIIPTLSH 553

Query: 380 WNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHE--- 436
           +  M+  + + GL +EA    ++M    + P+ VT  S+LSAC     I LGK   E   
Sbjct: 554 YACMVDLFGRAGLLQEAQEFIEKM---PIEPDVVTWGSLLSACRVYKNIDLGKVAAERLL 610

Query: 437 LVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSH---KSEVTWNTMISGYGLHGH 493
           L++  N  S  Y  +AL ++Y+ CG   EA ++   M     K E  ++ +   + +H  
Sbjct: 611 LLEPEN--SGAY--SALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHAF 666

Query: 494 GLE 496
           G+E
Sbjct: 667 GVE 669



 Score = 63.2 bits (152), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 57/242 (23%), Positives = 103/242 (42%), Gaps = 41/242 (16%)

Query: 409 APNPVTVSSILSACAQLGAISL----GKWVHELVKSRNFES----NIYVSTALIDMYAKC 460
           AP P+++S++L  C  L   S+    G++  +LV  R  +S    ++Y+   L+++Y+K 
Sbjct: 3   APVPLSLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLVFSVYLMNNLMNVYSKT 62

Query: 461 GNIVEARELFDLMS-------------------------------HKSEVTWNTMISGYG 489
           G  + AR+LFD M                                 +  V+W TMI GY 
Sbjct: 63  GYALHARKLFDEMPLRTAFSWNTVLSAYAKRGDMDSSCEFFDRLPQRDSVSWTTMIVGYK 122

Query: 490 LHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLA 549
             G   +A+++  EM+  GI PS  T  +VL + +    +  G ++  S I   G +   
Sbjct: 123 NIGQYHKAIRIMGEMMREGIEPSQFTLTNVLASVAATRCLETGKKV-HSFIVKLGLRGNV 181

Query: 550 EHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFE 609
                ++++  + G    A      + V+   + W A++   M     +LA    E++ E
Sbjct: 182 SVSNSLLNMYAKCGDPMMAKVVFDRMVVKD-ISSWNAMIALHMQVGQMDLAMAQFEQMAE 240

Query: 610 LD 611
            D
Sbjct: 241 RD 242


>gi|449445033|ref|XP_004140278.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g20230-like [Cucumis sativus]
          Length = 679

 Score =  457 bits (1177), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 236/608 (38%), Positives = 349/608 (57%), Gaps = 35/608 (5%)

Query: 212 SVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDI 271
           S A V   +  +  L+LG ++    L  G      V + +V+FY+  G+++ +  +F  I
Sbjct: 72  SYAPVFQFLTGLNMLKLGHQVHAHMLLRGLQPTALVGSKMVAFYASSGDIDSSVSVFNGI 131

Query: 272 VRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTN 331
             P  +  N+MI  Y   G  E ++  +  + +     +  T   ++        + +  
Sbjct: 132 GEPSSLLFNSMIRAYARYGFAERTVATYFSMHSWGFTGDYFTFPFVLKSSVELLSVWMGK 191

Query: 332 CIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYT--- 388
           C+H   L+ G+  +  V T+L  +Y +  E+  A K+FD  + + ++SWNA++AGYT   
Sbjct: 192 CVHGLILRIGLQFDLYVATSLIILYGKCGEINDAGKVFDNMTIRDVSSWNALLAGYTKSG 251

Query: 389 ----------------------------QNGLTEEAISLFQEM--QASKVAPNPVTVSSI 418
                                       Q+GL ++A+SLF EM  + S V PN VT+ S+
Sbjct: 252 CIDAALAIFERMPWRNIVSWTTMISGYSQSGLAQQALSLFDEMVKEDSGVRPNWVTIMSV 311

Query: 419 LSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSH--K 476
           L ACAQL  +  G+ +HEL       SN  V  AL  MYAKCG++V+AR  FD ++   K
Sbjct: 312 LPACAQLSTLERGRQIHELACRMGLNSNASVLIALTAMYAKCGSLVDARNCFDKLNRNEK 371

Query: 477 SEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIF 536
           + + WNTMI+ Y  +GHGL+A+  F EM+ +GI+P  +TF  +L  CSH+GLV  G + F
Sbjct: 372 NLIAWNTMITAYASYGHGLQAVSTFREMIQAGIQPDDITFTGLLSGCSHSGLVDVGLKYF 431

Query: 537 QSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKD 596
             M   +   P  EHYAC+ D+LGRAG+L +A + +  + +  GP++WG+LL AC  H++
Sbjct: 432 NHMSTTYSINPRVEHYACVADLLGRAGRLAEASKLVGEMPMPAGPSIWGSLLAACRKHRN 491

Query: 597 TNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIE 656
             +A  A+ KLF L+PEN G +VLLSN+Y+    + +   +R +VK +   K+PGC+ IE
Sbjct: 492 LEMAETAARKLFVLEPENTGNYVLLSNMYAEAGRWQEVDKLRAIVKSQGTKKSPGCSWIE 551

Query: 657 VGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVH 716
           + G  H+F  GD  HPQ   IY  LE L  KM+ AG+  +T   LHD+ EEEKE  +  H
Sbjct: 552 INGKAHMFLGGDTSHPQGKEIYMFLEALPEKMKAAGYFPDTSYVLHDISEEEKEFNLIAH 611

Query: 717 SEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGG 776
           SEKLA+AFG++ T   T +R+ KNLR+C DCHTA  FIS++ GR ++VRD NRFHHFKGG
Sbjct: 612 SEKLAVAFGILNTPAETVLRVTKNLRICGDCHTAMVFISEIYGREVIVRDINRFHHFKGG 671

Query: 777 VCSCGDYW 784
            CSCGDYW
Sbjct: 672 CCSCGDYW 679



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 106/418 (25%), Positives = 193/418 (46%), Gaps = 38/418 (9%)

Query: 106 PDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKV 165
           P   +Y+ V    +      +G  +H H ++ G      VG+ +V  Y     + S+  V
Sbjct: 68  PPILSYAPVFQFLTGLNMLKLGHQVHAHMLLRGLQPTALVGSKMVAFYASSGDIDSSVSV 127

Query: 166 FDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQE 225
           F+ + E  ++L+NSMI    +    + ++  +  M   G T  D  +   VL +  E+  
Sbjct: 128 FNGIGEPSSLLFNSMIRAYARYGFAERTVATYFSMHSWGFTG-DYFTFPFVLKSSVELLS 186

Query: 226 LRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNA---- 281
           + +G  +  L L++G    +YV T L+  Y KCGE+  A  +F ++   D+ S NA    
Sbjct: 187 VWMGKCVHGLILRIGLQFDLYVATSLIILYGKCGEINDAGKVFDNMTIRDVSSWNALLAG 246

Query: 282 ---------------------------MISGYTCNGKTESSLRLFRQLLA--SAERVNSS 312
                                      MISGY+ +G  + +L LF +++   S  R N  
Sbjct: 247 YTKSGCIDAALAIFERMPWRNIVSWTTMISGYSQSGLAQQALSLFDEMVKEDSGVRPNWV 306

Query: 313 TIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDE- 371
           TI+ ++P       L     IH    + G+ SN+SVL AL+ +Y++   +  AR  FD+ 
Sbjct: 307 TIMSVLPACAQLSTLERGRQIHELACRMGLNSNASVLIALTAMYAKCGSLVDARNCFDKL 366

Query: 372 -SSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISL 430
             +EK+L +WN MI  Y   G   +A+S F+EM  + + P+ +T + +LS C+  G + +
Sbjct: 367 NRNEKNLIAWNTMITAYASYGHGLQAVSTFREMIQAGIQPDDITFTGLLSGCSHSGLVDV 426

Query: 431 G-KWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVT-WNTMIS 486
           G K+ + +  + +    +     + D+  + G + EA +L   M   +  + W ++++
Sbjct: 427 GLKYFNHMSTTYSINPRVEHYACVADLLGRAGRLAEASKLVGEMPMPAGPSIWGSLLA 484



 Score =  119 bits (299), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 91/365 (24%), Positives = 161/365 (44%), Gaps = 50/365 (13%)

Query: 27  QTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNE 86
           Q HA +++ G Q      +K+    +       + ++F  I +P   LFN +IR ++   
Sbjct: 91  QVHAHMLLRGLQPTALVGSKMVAFYASSGDIDSSVSVFNGIGEPSSLLFNSMIRAYARYG 150

Query: 87  MPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVG 146
             + ++  Y  +  +   T D FT+ FVL ++       +G  +HG  +  G   DL+V 
Sbjct: 151 FAERTVATYFSMH-SWGFTGDYFTFPFVLKSSVELLSVWMGKCVHGLILRIGLQFDLYVA 209

Query: 147 AALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCF---------------- 190
            +L+ LY K   +  A KVFD M  +D   WN++++G  K+ C                 
Sbjct: 210 TSLIILYGKCGEINDAGKVFDNMTIRDVSSWNALLAGYTKSGCIDAALAIFERMPWRNIV 269

Query: 191 ---------------QDSIWVFGDMVR-NGGTWLDSTSVAAVLPAVAEVQELRLGMEIQC 234
                          Q ++ +F +MV+ + G   +  ++ +VLPA A++  L  G +I  
Sbjct: 270 SWTTMISGYSQSGLAQQALSLFDEMVKEDSGVRPNWVTIMSVLPACAQLSTLERGRQIHE 329

Query: 235 LGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVR--PDLISCNAMISGYTCNGKT 292
           L  ++G + +  VL  L + Y+KCG +  A   F  + R   +LI+ N MI+ Y   G  
Sbjct: 330 LACRMGLNSNASVLIALTAMYAKCGSLVDARNCFDKLNRNEKNLIAWNTMITAYASYGHG 389

Query: 293 ESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTAL 352
             ++  FR+++ +  + +  T  GL           L+ C HS  +  G+         +
Sbjct: 390 LQAVSTFREMIQAGIQPDDITFTGL-----------LSGCSHSGLVDVGL----KYFNHM 434

Query: 353 STVYS 357
           ST YS
Sbjct: 435 STTYS 439



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 73/275 (26%), Positives = 127/275 (46%), Gaps = 36/275 (13%)

Query: 299 FRQLLASAERVNSSTIVGLIPVFY---PFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTV 355
            + LL          I+   PVF        L L + +H+  L  G+   + V + +   
Sbjct: 55  LQNLLQPLSAPGPPPILSYAPVFQFLTGLNMLKLGHQVHAHMLLRGLQPTALVGSKMVAF 114

Query: 356 YSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTV 415
           Y+   +++++  +F+   E S   +N+MI  Y + G  E  ++ +  M +     +  T 
Sbjct: 115 YASSGDIDSSVSVFNGIGEPSSLLFNSMIRAYARYGFAERTVATYFSMHSWGFTGDYFTF 174

Query: 416 SSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMS- 474
             +L +  +L ++ +GK VH L+     + ++YV+T+LI +Y KCG I +A ++FD M+ 
Sbjct: 175 PFVLKSSVELLSVWMGKCVHGLILRIGLQFDLYVATSLIILYGKCGEINDAGKVFDNMTI 234

Query: 475 ------------------------------HKSEVTWNTMISGYGLHGHGLEALQLFSEM 504
                                          ++ V+W TMISGY   G   +AL LF EM
Sbjct: 235 RDVSSWNALLAGYTKSGCIDAALAIFERMPWRNIVSWTTMISGYSQSGLAQQALSLFDEM 294

Query: 505 LH--SGIRPSGVTFLSVLYACSHAGLVREGDEIFQ 537
           +   SG+RP+ VT +SVL AC+    +  G +I +
Sbjct: 295 VKEDSGVRPNWVTIMSVLPACAQLSTLERGRQIHE 329


>gi|347954530|gb|AEP33765.1| organelle transcript processing 82, partial [Lepidium sativum]
          Length = 672

 Score =  457 bits (1177), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 256/664 (38%), Positives = 383/664 (57%), Gaps = 38/664 (5%)

Query: 156 FSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAA 215
           F  +  A  +F+ + E + ++WN+M  G   N     ++ ++  M+ + G   +S S   
Sbjct: 12  FDGLSYAISIFETIQEPNLLIWNTMFRGHALNSDSVTALKLYVCMI-SLGLLPNSYSFPF 70

Query: 216 VLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVE------------- 262
           +L + A+ + L  G +I    LKLG+   +YV T L+S Y++ G +E             
Sbjct: 71  LLKSCAKSKALIEGQQIHGHVLKLGYDLDMYVNTSLISMYAQNGRLEDAHKVFDRSSHRH 130

Query: 263 ------------------RAELLFRDIVRPDLISCNAMISGY--TCNGKTESSLRLFRQL 302
                              A  LF +I   D++S NAMISGY  TCN K   +L L++ +
Sbjct: 131 VVSYTALITGYASRGYINNARKLFDEISVKDVVSWNAMISGYVETCNFK--EALELYKDM 188

Query: 303 LASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEM 362
           + +  + + ST+V ++      G + L   +HS+    G  SN  ++  L  +YS+  E+
Sbjct: 189 MKTNVKPDESTMVTVVSACAQSGSIELGRQLHSWIEDHGFGSNIKIVNVLIDLYSKCGEV 248

Query: 363 EAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSAC 422
           E A  LF   ++K + SWN +I G+T   L +EA+ LFQEM  S  +PN VT+ S+L AC
Sbjct: 249 ETACGLFQGLAKKDVISWNTLIGGHTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPAC 308

Query: 423 AQLGAISLGKWVHELVKSR--NFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVT 480
           A LGAI +G+W+H  +  R     +   + T+LIDMYAKCG+I  A+++FD M  +S  +
Sbjct: 309 AHLGAIDIGRWIHVYINKRLKGVTNASSLLTSLIDMYAKCGDIEAAKQVFDSMLTRSLSS 368

Query: 481 WNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMI 540
           WN MI G+ +HG    A  LFS+M  +GI P  +TF+ +L ACSH+G++  G  IF+SM 
Sbjct: 369 WNAMIFGFAMHGKANAAFDLFSKMRKNGIDPDDITFVGLLSACSHSGMLDLGRHIFRSMS 428

Query: 541 HDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLA 600
            D+   P  EHY CM+D+LG  G  ++A E I+ + +EP   +W +LL AC +H +  L 
Sbjct: 429 QDYKITPKLEHYGCMIDLLGHCGLFKEAKEMIRTMPMEPDGVIWCSLLKACKMHNNVELG 488

Query: 601 RVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGT 660
              ++ L +++PEN G +VLLSNIY+    + Q A +R ++  + + KAPGC+ IE+   
Sbjct: 489 ESYAQNLIKIEPENPGSYVLLSNIYATAGRWDQVAKIRTLLNDKGIKKAPGCSSIEIDSV 548

Query: 661 PHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKL 720
            H F  GD+ HP++  IY MLE++   M E GF  +T   L ++EEE KE  ++ HSEKL
Sbjct: 549 VHEFIIGDKFHPRNREIYRMLEEMEMLMEETGFVPDTSEVLQEMEEEWKEGALRHHSEKL 608

Query: 721 AIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSC 780
           AIAFGLI+T+PGT++ I+KNLRVC +CH ATK ISK+  R I+ RD  R H  K GV SC
Sbjct: 609 AIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRLHLLKDGVWSC 668

Query: 781 GDYW 784
            DYW
Sbjct: 669 HDYW 672



 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 149/566 (26%), Positives = 274/566 (48%), Gaps = 77/566 (13%)

Query: 54  FKATCYARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSF 113
           F    YA ++F +I +P+L ++N + RG + N    +++  Y  +  +  L P+++++ F
Sbjct: 12  FDGLSYAISIFETIQEPNLLIWNTMFRGHALNSDSVTALKLYVCM-ISLGLLPNSYSFPF 70

Query: 114 VLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLY------------FKFS---- 157
           +L + +       G  +HGH +  GY  D++V  +L+ +Y            F  S    
Sbjct: 71  LLKSCAKSKALIEGQQIHGHVLKLGYDLDMYVNTSLISMYAQNGRLEDAHKVFDRSSHRH 130

Query: 158 ---------------WVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVR 202
                          ++ +ARK+FD++  KD V WN+MISG ++ C F++++ ++ DM++
Sbjct: 131 VVSYTALITGYASRGYINNARKLFDEISVKDVVSWNAMISGYVETCNFKEALELYKDMMK 190

Query: 203 NGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVE 262
                 D +++  V+ A A+   + LG ++       GF  ++ ++  L+  YSKCGEVE
Sbjct: 191 TN-VKPDESTMVTVVSACAQSGSIELGRQLHSWIEDHGFGSNIKIVNVLIDLYSKCGEVE 249

Query: 263 RAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFY 322
            A  LF+ + + D+IS N +I G+T     + +L LF+++L S E  N  T++ ++P   
Sbjct: 250 TACGLFQGLAKKDVISWNTLIGGHTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACA 309

Query: 323 PFGHLHLTNCIHSFCLK--SGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASW 380
             G + +   IH +  K   G+ + SS+LT+L  +Y++  ++EAA+++FD    +SL+SW
Sbjct: 310 HLGAIDIGRWIHVYINKRLKGVTNASSLLTSLIDMYAKCGDIEAAKQVFDSMLTRSLSSW 369

Query: 381 NAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWV-HELVK 439
           NAMI G+  +G    A  LF +M+ + + P+ +T   +LSAC+  G + LG+ +   + +
Sbjct: 370 NAMIFGFAMHGKANAAFDLFSKMRKNGIDPDDITFVGLLSACSHSGMLDLGRHIFRSMSQ 429

Query: 440 SRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQ 499
                  +     +ID+   CG   EA+E+   M                          
Sbjct: 430 DYKITPKLEHYGCMIDLLGHCGLFKEAKEMIRTMP------------------------- 464

Query: 500 LFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDIL 559
                    + P GV + S+L AC     V  G+   Q++I      P +  Y  + +I 
Sbjct: 465 ---------MEPDGVIWCSLLKACKMHNNVELGESYAQNLIKIEPENPGS--YVLLSNIY 513

Query: 560 GRAGQLEKALEF-----IKGLAVEPG 580
             AG+ ++  +       KG+   PG
Sbjct: 514 ATAGRWDQVAKIRTLLNDKGIKKAPG 539



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 80/286 (27%), Positives = 136/286 (47%), Gaps = 36/286 (12%)

Query: 349 LTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKV 408
           L   S +    + +  A  +F+   E +L  WN M  G+  N  +  A+ L+  M +  +
Sbjct: 2   LIEFSVLSPHFDGLSYAISIFETIQEPNLLIWNTMFRGHALNSDSVTALKLYVCMISLGL 61

Query: 409 APNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGN------ 462
            PN  +   +L +CA+  A+  G+ +H  V    ++ ++YV+T+LI MYA+ G       
Sbjct: 62  LPNSYSFPFLLKSCAKSKALIEGQQIHGHVLKLGYDLDMYVNTSLISMYAQNGRLEDAHK 121

Query: 463 -------------------------IVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEA 497
                                    I  AR+LFD +S K  V+WN MISGY    +  EA
Sbjct: 122 VFDRSSHRHVVSYTALITGYASRGYINNARKLFDEISVKDVVSWNAMISGYVETCNFKEA 181

Query: 498 LQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVD 557
           L+L+ +M+ + ++P   T ++V+ AC+ +G +  G ++  S I DHGF    +    ++D
Sbjct: 182 LELYKDMMKTNVKPDESTMVTVVSACAQSGSIELGRQL-HSWIEDHGFGSNIKIVNVLID 240

Query: 558 ILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVA 603
           +  + G++E A    +GLA +     W  L+G    H   NL + A
Sbjct: 241 LYSKCGEVETACGLFQGLA-KKDVISWNTLIGG---HTHMNLYKEA 282



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 52/208 (25%), Positives = 95/208 (45%), Gaps = 4/208 (1%)

Query: 27  QTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNE 86
           Q H+ I  HGF +++  V  L    S       A  LF  + K D+  +N +I G ++  
Sbjct: 218 QLHSWIEDHGFGSNIKIVNVLIDLYSKCGEVETACGLFQGLAKKDVISWNTLIGGHTHMN 277

Query: 87  MPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGH--AIVSGYGSDLF 144
           + K ++  +  + + +  +P++ T   VL A +      IG  +H +    + G  +   
Sbjct: 278 LYKEALLLFQEMLR-SGESPNDVTMLSVLPACAHLGAIDIGRWIHVYINKRLKGVTNASS 336

Query: 145 VGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNG 204
           +  +L+D+Y K   +++A++VFD M  +    WN+MI G   +     +  +F  M +NG
Sbjct: 337 LLTSLIDMYAKCGDIEAAKQVFDSMLTRSLSSWNAMIFGFAMHGKANAAFDLFSKMRKNG 396

Query: 205 GTWLDSTSVAAVLPAVAEVQELRLGMEI 232
               D  +   +L A +    L LG  I
Sbjct: 397 ID-PDDITFVGLLSACSHSGMLDLGRHI 423


>gi|125537719|gb|EAY84114.1| hypothetical protein OsI_05496 [Oryza sativa Indica Group]
          Length = 751

 Score =  457 bits (1177), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 240/674 (35%), Positives = 371/674 (55%), Gaps = 31/674 (4%)

Query: 142 DLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMV 201
           +LF   AL+        V    ++F  MPE+D V +N++I+G         S+ ++  ++
Sbjct: 78  NLFTRNALLSALAHSRLVPDMERLFASMPERDAVSYNALITGFSSTGSPARSVQLYRALL 137

Query: 202 RNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSK---- 257
           R         +++A++   + + +  LG  + C  L+LGF  + +V + LV  Y+K    
Sbjct: 138 REESVRPTRITLSAMIMVASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLI 197

Query: 258 ---------------------------CGEVERAELLFRDIVRPDLISCNAMISGYTCNG 290
                                      C  +E A+ LF+ +V  D I+   M++G T NG
Sbjct: 198 RDARRVFQEMEAKTVVMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNG 257

Query: 291 KTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLT 350
               +L +FR++ A    ++  T   ++              IH++  ++    N  V +
Sbjct: 258 LQLEALDVFRRMRAEGVGIDQYTFGSILTACGALAASEEGKQIHAYITRTWYEDNVFVGS 317

Query: 351 ALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAP 410
           AL  +YS+   +  A  +F   + +++ SW AMI GY QN  +EEA+  F EMQ   + P
Sbjct: 318 ALVDMYSKCRSIRLAEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKP 377

Query: 411 NPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELF 470
           +  T+ S++S+CA L ++  G   H L         I VS AL+ +Y KCG+I +A  LF
Sbjct: 378 DDFTLGSVISSCANLASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLF 437

Query: 471 DLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVR 530
           D MS   +V+W  +++GY   G   E + LF +ML +G++P GVTF+ VL ACS AGLV 
Sbjct: 438 DEMSFHDQVSWTALVTGYAQFGKAKETIDLFEKMLVNGLKPDGVTFIGVLSACSRAGLVE 497

Query: 531 EGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGA 590
           +G + F SM  DH   P+ +HY CM+D+  R+G+ ++A EFIK +   P    W  LL +
Sbjct: 498 KGCDYFDSMQKDHDIVPIDDHYTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSS 557

Query: 591 CMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAP 650
           C +  +  + + A+E L E DP+N   +VLL ++++A+  + + A +R+ ++ R++ K P
Sbjct: 558 CRLRGNMEIGKWAAENLLETDPQNPASYVLLCSMHAAKGQWTEVAHLRRGMRDRQVKKEP 617

Query: 651 GCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKE 710
           GC+ I+     H+F++ DQ HP S+ IY  LE LN KM E G++ +  + LHDV + +K 
Sbjct: 618 GCSWIKYKNKVHIFSADDQSHPFSSRIYEKLEWLNSKMAEEGYKPDVSSVLHDVADADKV 677

Query: 711 LMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRF 770
            M+  HSEKLAIAFGLI       IRI+KNLRVC+DCH ATKFISK+TGR I+VRDA RF
Sbjct: 678 HMISHHSEKLAIAFGLIFVPQEMPIRIVKNLRVCVDCHNATKFISKITGRDILVRDAVRF 737

Query: 771 HHFKGGVCSCGDYW 784
           H F  G CSCGD+W
Sbjct: 738 HKFSDGTCSCGDFW 751



 Score =  218 bits (556), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 137/463 (29%), Positives = 226/463 (48%), Gaps = 32/463 (6%)

Query: 63  LFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACC 122
           LF S+P+ D   +N +I GFS+   P  S+  Y  L +  ++ P   T S ++  ASA  
Sbjct: 101 LFASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREESVRPTRITLSAMIMVASALS 160

Query: 123 DRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMIS 182
           DR++G  +H   +  G+G+  FVG+ LVD+Y K   ++ AR+VF +M  K  V++N++I+
Sbjct: 161 DRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTLIT 220

Query: 183 GLMKNCCFQDSIWVFGDMV-RNGGTW-----------------------------LDSTS 212
           GL++    +D+  +F  MV R+  TW                             +D  +
Sbjct: 221 GLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYT 280

Query: 213 VAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIV 272
             ++L A   +     G +I     +  + D+V+V + LV  YSKC  +  AE +FR + 
Sbjct: 281 FGSILTACGALAASEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMT 340

Query: 273 RPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNC 332
             ++IS  AMI GY  N  +E ++R F ++     + +  T+  +I        L     
Sbjct: 341 CRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQ 400

Query: 333 IHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGL 392
            H   L SG++   +V  AL T+Y +   +E A +LFDE S     SW A++ GY Q G 
Sbjct: 401 FHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGK 460

Query: 393 TEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLG-KWVHELVKSRNFESNIYVST 451
            +E I LF++M  + + P+ VT   +LSAC++ G +  G  +   + K  +        T
Sbjct: 461 AKETIDLFEKMLVNGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKDHDIVPIDDHYT 520

Query: 452 ALIDMYAKCGNIVEARELFDLMSHKSEV-TWNTMISGYGLHGH 493
            +ID+Y++ G   EA E    M H  +   W T++S   L G+
Sbjct: 521 CMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSSCRLRGN 563



 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 108/407 (26%), Positives = 184/407 (45%), Gaps = 65/407 (15%)

Query: 226 LRLGMEIQCLGLKLGFH-DHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISC----- 279
           +R+   + CL LK        ++L  L++ Y+K G + RA  +F ++  P+L +      
Sbjct: 28  VRVAGAVHCLILKTFLQAPPTFLLNHLLTAYAKSGRLARARRVFDEMPDPNLFTRNALLS 87

Query: 280 --------------------------NAMISGYTCNGKTESSLRLFRQLLASAE-RVNSS 312
                                     NA+I+G++  G    S++L+R LL     R    
Sbjct: 88  ALAHSRLVPDMERLFASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREESVRPTRI 147

Query: 313 TIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDES 372
           T+  +I V        L + +H   L+ G  + + V + L  +Y+++  +  AR++F E 
Sbjct: 148 TLSAMIMVASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEM 207

Query: 373 SEKSLA-------------------------------SWNAMIAGYTQNGLTEEAISLFQ 401
             K++                                +W  M+ G TQNGL  EA+ +F+
Sbjct: 208 EAKTVVMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFR 267

Query: 402 EMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCG 461
            M+A  V  +  T  SIL+AC  L A   GK +H  +    +E N++V +AL+DMY+KC 
Sbjct: 268 RMRAEGVGIDQYTFGSILTACGALAASEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCR 327

Query: 462 NIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLY 521
           +I  A  +F  M+ ++ ++W  MI GYG +    EA++ FSEM   GI+P   T  SV+ 
Sbjct: 328 SIRLAEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVIS 387

Query: 522 ACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKA 568
           +C++   + EG + F  +    G          +V + G+ G +E A
Sbjct: 388 SCANLASLEEGAQ-FHCLALVSGLMRYITVSNALVTLYGKCGSIEDA 433



 Score = 72.8 bits (177), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 66/274 (24%), Positives = 122/274 (44%), Gaps = 14/274 (5%)

Query: 27  QTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNE 86
           Q HA I    +++++   + L    S  ++   A A+F  +   ++  +  +I G+  N 
Sbjct: 299 QIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTCRNIISWTAMIVGYGQNA 358

Query: 87  MPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVG 146
             + ++  ++ ++ +  + PD+FT   V+S+ +       G   H  A+VSG    + V 
Sbjct: 359 CSEEAVRAFSEMQMD-GIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMRYITVS 417

Query: 147 AALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGT 206
            ALV LY K   ++ A ++FD+M   D V W ++++G  +    +++I +F  M+ N G 
Sbjct: 418 NALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGKAKETIDLFEKMLVN-GL 476

Query: 207 WLDSTSVAAVLPAVAEVQELRLGM-EIQCLGLKLGFHDHVYV-----LTGLVSFYSKCGE 260
             D  +   VL A +     R G+ E  C        DH  V      T ++  YS+ G 
Sbjct: 477 KPDGVTFIGVLSACS-----RAGLVEKGCDYFDSMQKDHDIVPIDDHYTCMIDLYSRSGR 531

Query: 261 VERAELLFRDIVR-PDLISCNAMISGYTCNGKTE 293
            + AE   + +   PD      ++S     G  E
Sbjct: 532 FKEAEEFIKQMPHSPDAFGWATLLSSCRLRGNME 565


>gi|302814190|ref|XP_002988779.1| hypothetical protein SELMODRAFT_128847 [Selaginella moellendorffii]
 gi|300143350|gb|EFJ10041.1| hypothetical protein SELMODRAFT_128847 [Selaginella moellendorffii]
          Length = 796

 Score =  457 bits (1176), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 257/737 (34%), Positives = 414/737 (56%), Gaps = 29/737 (3%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           AR  F +I + + + +  ++  ++ N   ++++  Y    K   L P+   Y+ VL A +
Sbjct: 77  ARVAFDAIARKNDYSWGSMLTAYAQNGHYRAALDLY----KRMDLQPNPVVYTTVLGACA 132

Query: 120 ACCDRSIGVLLHGHAIVS------GYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKD 173
                SI  L  G AI S      G   D+ +  +L+ +Y K   ++ A+++F++M  + 
Sbjct: 133 -----SIEALEEGKAIHSRISGTKGLKLDVILENSLLTMYAKCGSLEDAKRLFERMSGRR 187

Query: 174 TVL-WNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEI 232
           +V  WN+MI+   ++  F+++I ++ DM           +  +VL A + +  L  G +I
Sbjct: 188 SVSSWNAMIAAYAQSGHFEEAIRLYEDMDVEPSV----RTFTSVLSACSNLGLLDQGRKI 243

Query: 233 QCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKT 292
             L    G    + +   L++ Y++C  ++ A  +F+ + R D++S +AMI+ +      
Sbjct: 244 HALISSRGTELDLSLQNALLTMYARCKCLDDAAKIFQRLPRRDVVSWSAMIAAFAETDLF 303

Query: 293 ESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSG---IVSNSSVL 349
           + ++  + ++     R N  T   ++      G L     +H   L +G    + N + L
Sbjct: 304 DEAIEFYSKMQLEGVRPNYYTFASVLLACASVGDLRAGRAVHDQILGNGYKITLVNGTAL 363

Query: 350 TALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQ-ASKV 408
             L T Y  L+E   AR LFD+   +    W  +I GY++ G     + L++EM+  +KV
Sbjct: 364 VDLYTSYGSLDE---ARSLFDQIENRDEGLWTVLIGGYSKQGHRTGVLELYREMKNTTKV 420

Query: 409 APNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARE 468
               +  S ++SACA LGA +  +  H  +++    S+  ++T+L++MY++ GN+  AR+
Sbjct: 421 PATKIIYSCVISACASLGAFADARQAHSDIEADGMISDFVLATSLVNMYSRWGNLESARQ 480

Query: 469 LFDLMSHKSEVTWNTMISGYGLHG-HGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAG 527
           +FD MS +  + W T+I+GY  HG HGL AL L+ EM   G  PS +TF+ VLYACSHAG
Sbjct: 481 VFDKMSSRDTLAWTTLIAGYAKHGEHGL-ALGLYKEMELEGAEPSELTFMVVLYACSHAG 539

Query: 528 LVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGAL 587
           L  +G ++F S+  D+   P   HY+C++D+L RAG+L  A E I  + VEP    W +L
Sbjct: 540 LQEQGKQLFISIQSDYAMHPNIAHYSCIIDLLSRAGRLSDAEELINAMPVEPNDVTWSSL 599

Query: 588 LGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLA 647
           LGA  IHKD   A  A+ ++ +LDP +   +VLLSN+++   +    A+VR  +  R + 
Sbjct: 600 LGASRIHKDVKRATHAAGQITKLDPVDPASYVLLSNVHAVTGNLAGMASVRNTMVARGVK 659

Query: 648 KAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEE 707
           K  G + IEV    H F  GD  HP+   I+A L++L+ K++EAG+  E+   LHDV E+
Sbjct: 660 KRRGSSWIEVADQIHEFNVGDNSHPRFQEIFAELQRLSPKIKEAGYVPESEEVLHDVGEK 719

Query: 708 EKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDA 767
           EKEL++++HSEKLAIAFGLIAT PGT +RI   LR+C DCH+A KFIS +  R I+VRD+
Sbjct: 720 EKELLLRLHSEKLAIAFGLIATAPGTTLRIFNTLRICHDCHSAVKFISAIARREIIVRDS 779

Query: 768 NRFHHFKGGVCSCGDYW 784
           +RFH F+ G CSCGDYW
Sbjct: 780 SRFHKFRDGQCSCGDYW 796



 Score =  186 bits (473), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 136/476 (28%), Positives = 225/476 (47%), Gaps = 21/476 (4%)

Query: 133 HAIVSGYGS-DLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQ 191
           H  +SG  S ++F+G  +V  Y K   V SAR  FD +  K+   W SM++   +N  ++
Sbjct: 47  HDRISGAASANVFLGNEIVRAYGKCGSVASARVAFDAIARKNDYSWGSMLTAYAQNGHYR 106

Query: 192 DSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCL-----GLKLGFHDHVY 246
            ++    D+ +      +      VL A A ++ L  G  I        GLKL     V 
Sbjct: 107 AAL----DLYKRMDLQPNPVVYTTVLGACASIEALEEGKAIHSRISGTKGLKL----DVI 158

Query: 247 VLTGLVSFYSKCGEVERAELLFRDIV-RPDLISCNAMISGYTCNGKTESSLRLFRQLLAS 305
           +   L++ Y+KCG +E A+ LF  +  R  + S NAMI+ Y  +G  E ++RL+  +   
Sbjct: 159 LENSLLTMYAKCGSLEDAKRLFERMSGRRSVSSWNAMIAAYAQSGHFEEAIRLYEDMDVE 218

Query: 306 AERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAA 365
               +  T   ++      G L     IH+     G   + S+  AL T+Y+R   ++ A
Sbjct: 219 P---SVRTFTSVLSACSNLGLLDQGRKIHALISSRGTELDLSLQNALLTMYARCKCLDDA 275

Query: 366 RKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQL 425
            K+F     + + SW+AMIA + +  L +EAI  + +MQ   V PN  T +S+L ACA +
Sbjct: 276 AKIFQRLPRRDVVSWSAMIAAFAETDLFDEAIEFYSKMQLEGVRPNYYTFASVLLACASV 335

Query: 426 GAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMI 485
           G +  G+ VH+ +    ++  +   TAL+D+Y   G++ EAR LFD + ++ E  W  +I
Sbjct: 336 GDLRAGRAVHDQILGNGYKITLVNGTALVDLYTSYGSLDEARSLFDQIENRDEGLWTVLI 395

Query: 486 SGYGLHGHGLEALQLFSEMLHSGIRP-SGVTFLSVLYACSHAGLVREGDEIFQSMIHDHG 544
            GY   GH    L+L+ EM ++   P + + +  V+ AC+  G   +  +   S I   G
Sbjct: 396 GGYSKQGHRTGVLELYREMKNTTKVPATKIIYSCVISACASLGAFADARQA-HSDIEADG 454

Query: 545 FKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLA 600
                     +V++  R G LE A +    ++     A W  L+     H +  LA
Sbjct: 455 MISDFVLATSLVNMYSRWGNLESARQVFDKMSSRDTLA-WTTLIAGYAKHGEHGLA 509



 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 106/436 (24%), Positives = 181/436 (41%), Gaps = 65/436 (14%)

Query: 3   MKTPQSRNLFLSLLKGAKTQSQLTQ---THAQIIIHGFQNDLSTVTKLAHRLSDFKATCY 59
           M    S   F S+L        L Q    HA I   G + DLS    L    +  K    
Sbjct: 215 MDVEPSVRTFTSVLSACSNLGLLDQGRKIHALISSRGTELDLSLQNALLTMYARCKCLDD 274

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           A  +F  +P+ D+  ++ +I  F+  ++   +I FY+ ++    + P+ +T++ VL A +
Sbjct: 275 AAKIFQRLPRRDVVSWSAMIAAFAETDLFDEAIEFYSKMQLE-GVRPNYYTFASVLLACA 333

Query: 120 ACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNS 179
           +  D   G  +H   + +GY   L  G ALVDLY  +  +  AR +FD++  +D  LW  
Sbjct: 334 SVGDLRAGRAVHDQILGNGYKITLVNGTALVDLYTSYGSLDEARSLFDQIENRDEGLWTV 393

Query: 180 MISGLMKNCCFQDSIWVFGDMVRNGGTWLDST--------SVAAVLPAVAEVQELRLGME 231
           +I G  K       + ++ +M     T + +T        S  A L A A+ ++    +E
Sbjct: 394 LIGGYSKQGHRTGVLELYREM--KNTTKVPATKIIYSCVISACASLGAFADARQAHSDIE 451

Query: 232 IQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGK 291
                   G      + T LV+ YS+ G +E A  +F  +   D ++   +I+GY  +G+
Sbjct: 452 AD------GMISDFVLATSLVNMYSRWGNLESARQVFDKMSSRDTLAWTTLIAGYAKHGE 505

Query: 292 TESSLRLFRQL-LASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLT 350
              +L L++++ L  AE    + +V    V Y   H  L                     
Sbjct: 506 HGLALGLYKEMELEGAEPSELTFMV----VLYACSHAGL--------------------- 540

Query: 351 ALSTVYSRLNEMEAARKLF-----DESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQA 405
                       E  ++LF     D +   ++A ++ +I   ++ G   +A  L   M  
Sbjct: 541 -----------QEQGKQLFISIQSDYAMHPNIAHYSCIIDLLSRAGRLSDAEELINAM-- 587

Query: 406 SKVAPNPVTVSSILSA 421
             V PN VT SS+L A
Sbjct: 588 -PVEPNDVTWSSLLGA 602



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 42/172 (24%), Positives = 84/172 (48%), Gaps = 7/172 (4%)

Query: 419 LSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSE 478
           L  C  L ++   + +H+ + S    +N+++   ++  Y KCG++  AR  FD ++ K++
Sbjct: 34  LRQCQDLESV---RQIHDRI-SGAASANVFLGNEIVRAYGKCGSVASARVAFDAIARKND 89

Query: 479 VTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQS 538
            +W +M++ Y  +GH   AL L+  M    ++P+ V + +VL AC+    + EG  I   
Sbjct: 90  YSWGSMLTAYAQNGHYRAALDLYKRM---DLQPNPVVYTTVLGACASIEALEEGKAIHSR 146

Query: 539 MIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGA 590
           +    G K        ++ +  + G LE A    + ++     + W A++ A
Sbjct: 147 ISGTKGLKLDVILENSLLTMYAKCGSLEDAKRLFERMSGRRSVSSWNAMIAA 198


>gi|224089505|ref|XP_002308737.1| predicted protein [Populus trichocarpa]
 gi|222854713|gb|EEE92260.1| predicted protein [Populus trichocarpa]
          Length = 590

 Score =  457 bits (1175), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 231/571 (40%), Positives = 348/571 (60%), Gaps = 3/571 (0%)

Query: 216 VLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPD 275
           +L     + +L  G  I  L L   F D + +   L++ Y+KCG++  A  LF ++   D
Sbjct: 21  LLKRCTHLNKLNEGKIIHALLLNSRFRDDLVMQNTLLNLYAKCGDLVYARKLFDEMSSRD 80

Query: 276 LISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNC--I 333
           +++  A+I+GY+ + + + +L L  ++L    + N  T+  L+      G   +     +
Sbjct: 81  VVTWTALITGYSQHDRPQDALLLLPEMLRIGLKPNQFTLASLLKAASGVGSTDVLQGRQL 140

Query: 334 HSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLT 393
           H  CL+ G  SN  V  A+  +Y+R + +E A+ +FD    K+  SWNA+IAGY + G  
Sbjct: 141 HGLCLRYGYDSNVYVSCAILDMYARCHHLEEAQLIFDVMVSKNEVSWNALIAGYARKGQG 200

Query: 394 EEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTAL 453
           ++A  LF  M    V P   T SS+L ACA +G++  GKWVH L+     +   +V   L
Sbjct: 201 DKAFCLFSNMLRENVKPTHFTYSSVLCACASMGSLEQGKWVHALMIKWGEKLVAFVGNTL 260

Query: 454 IDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSG 513
           +DMYAK G+I +A+++FD ++ +  V+WN+M++GY  HG G  ALQ F EML + I P+ 
Sbjct: 261 LDMYAKSGSIEDAKKVFDRLAKRDVVSWNSMLTGYSQHGLGKVALQRFEEMLRTRIAPND 320

Query: 514 VTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIK 573
           +TFL VL ACSHAGL+ EG   F  M+  +  +P   HY  MVD+LGRAG L++A++FI 
Sbjct: 321 ITFLCVLTACSHAGLLDEGRHYF-DMMKKYNVEPQISHYVTMVDLLGRAGHLDRAIQFIS 379

Query: 574 GLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQ 633
            + ++P  AVWGALLGAC +HK+  L   A+E +FELD    G HVLL NIY+    +  
Sbjct: 380 EMPIKPTAAVWGALLGACRMHKNMELGGYAAECIFELDSHYPGTHVLLYNIYALAGRWND 439

Query: 634 AATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGF 693
           AA VR+++K+  + K P C+ +E+    HVF + D  HPQ   I+ M E+++ K++E G+
Sbjct: 440 AAKVRKMMKESGVKKEPACSWVEMENEVHVFVADDDAHPQRREIHNMWEQISDKIKEIGY 499

Query: 694 QTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKF 753
             ++   L  ++++E+E  ++ HSEKLA+AF L+ T PG+ IRI KN+R+C DCH+A KF
Sbjct: 500 VPDSSHVLLCMDQQEREAKLQYHSEKLALAFALLNTPPGSTIRIKKNIRICGDCHSAFKF 559

Query: 754 ISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           +SK+  R I+VRD NRFHHF  G CSC DYW
Sbjct: 560 VSKLVEREIIVRDTNRFHHFCDGACSCEDYW 590



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 114/478 (23%), Positives = 213/478 (44%), Gaps = 56/478 (11%)

Query: 8   SRNLFLSLLKGAKTQSQLTQ---THAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALF 64
           +R +  +LLK     ++L +    HA ++   F++DL     L +  +      YAR LF
Sbjct: 14  AREICHTLLKRCTHLNKLNEGKIIHALLLNSRFRDDLVMQNTLLNLYAKCGDLVYARKLF 73

Query: 65  FSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDR 124
             +   D+  +  +I G+S ++ P+ ++     + +   L P+ FT + +L AAS     
Sbjct: 74  DEMSSRDVVTWTALITGYSQHDRPQDALLLLPEMLR-IGLKPNQFTLASLLKAASGVGST 132

Query: 125 SI--GVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMIS 182
            +  G  LHG  +  GY S+++V  A++D+Y +   ++ A+ +FD M  K+ V WN++I+
Sbjct: 133 DVLQGRQLHGLCLRYGYDSNVYVSCAILDMYARCHHLEEAQLIFDVMVSKNEVSWNALIA 192

Query: 183 GLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFH 242
           G  +      +  +F +M+R        T  ++VL A A +  L  G  +  L +K G  
Sbjct: 193 GYARKGQGDKAFCLFSNMLRENVKPTHFT-YSSVLCACASMGSLEQGKWVHALMIKWGEK 251

Query: 243 DHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQL 302
              +V   L+  Y+K G +E A+ +F  + + D++S N+M++GY+ +G  + +L+ F ++
Sbjct: 252 LVAFVGNTLLDMYAKSGSIEDAKKVFDRLAKRDVVSWNSMLTGYSQHGLGKVALQRFEEM 311

Query: 303 LASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEM 362
           L +    N  T + +           LT C H+  L  G                     
Sbjct: 312 LRTRIAPNDITFLCV-----------LTACSHAGLLDEG--------------------- 339

Query: 363 EAARKLFD----ESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSI 418
              R  FD     + E  ++ +  M+    + G  + AI    EM    + P      ++
Sbjct: 340 ---RHYFDMMKKYNVEPQISHYVTMVDLLGRAGHLDRAIQFISEM---PIKPTAAVWGAL 393

Query: 419 LSACAQLGAISLGKWVHELVKSRNFESNIY---VSTALIDMYAKCGNIVEARELFDLM 473
           L AC     + LG +  E +    FE + +       L ++YA  G   +A ++  +M
Sbjct: 394 LGACRMHKNMELGGYAAECI----FELDSHYPGTHVLLYNIYALAGRWNDAAKVRKMM 447



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 56/176 (31%), Positives = 93/176 (52%), Gaps = 4/176 (2%)

Query: 417 SILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHK 476
           ++L  C  L  ++ GK +H L+ +  F  ++ +   L+++YAKCG++V AR+LFD MS +
Sbjct: 20  TLLKRCTHLNKLNEGKIIHALLLNSRFRDDLVMQNTLLNLYAKCGDLVYARKLFDEMSSR 79

Query: 477 SEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGL--VREGDE 534
             VTW  +I+GY  H    +AL L  EML  G++P+  T  S+L A S  G   V +G +
Sbjct: 80  DVVTWTALITGYSQHDRPQDALLLLPEMLRIGLKPNQFTLASLLKAASGVGSTDVLQGRQ 139

Query: 535 IFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGA 590
           +   +   +G+         ++D+  R   LE+A + I  + V      W AL+  
Sbjct: 140 L-HGLCLRYGYDSNVYVSCAILDMYARCHHLEEA-QLIFDVMVSKNEVSWNALIAG 193


>gi|227463000|gb|ACP39952.1| pentatricopeptide repeat protein [Gossypium hirsutum]
 gi|227463002|gb|ACP39953.1| pentatricopeptide repeat protein [Gossypium hirsutum]
          Length = 592

 Score =  457 bits (1175), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 236/540 (43%), Positives = 344/540 (63%), Gaps = 2/540 (0%)

Query: 247 VLTGLVSF-YSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLAS 305
           ++T L+SF Y+    +     LF  I +PD    +++I+  +     + SL  +R++L +
Sbjct: 53  LITKLLSFAYAAASPISYTRRLFFSIPKPDTFLFHSLITLTSKFSFPQESLLCYRRMLLA 112

Query: 306 AERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAA 365
               ++ T   +I          +   IH      G   ++ V  AL + Y++   +  A
Sbjct: 113 NISSSNYTFSAVIKSSADLTAFSIGETIHCHVYICGYGLDAYVQAALVSFYAKSGHVMIA 172

Query: 366 RKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQL 425
           RK+FD+  EK++ +WN+MI+GY QNG  +EA+ LF  MQ   V P+  T  S+LSACAQ+
Sbjct: 173 RKVFDKMPEKTVVAWNSMISGYEQNGFGKEAVELFFLMQDLGVKPDSSTFVSLLSACAQV 232

Query: 426 GAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMI 485
           GAI LG WVHE +    F+ N+ + TAL++MY++CGN+ +ARE+FD M  K+ V W  MI
Sbjct: 233 GAIGLGFWVHEYIARNCFDLNVVLGTALMNMYSRCGNVSKAREVFDSMEEKNIVAWTAMI 292

Query: 486 SGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGF 545
           SGYG+HGHG +A++LF+EM   G RP+ VTF++VL AC+HAGLV EG +IF +M  ++G 
Sbjct: 293 SGYGMHGHGSQAIELFNEMSFDGPRPNNVTFVAVLSACAHAGLVDEGRQIFTTMKQEYGL 352

Query: 546 KPLAEHYACMVDILGRAGQLEKALEFIKGLAV-EPGPAVWGALLGACMIHKDTNLARVAS 604
            P  EH  CMVD+LGRAG L +A +FIK  +  EP PAVW A+LGAC +HK+ +L    +
Sbjct: 353 VPSVEHQVCMVDMLGRAGHLNEAYQFIKNTSPKEPAPAVWTAMLGACKMHKNFDLGVEVA 412

Query: 605 EKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVF 664
           E L  ++PEN G++V+LSNIY+      +   +R ++ + +L K  G + I+V    ++F
Sbjct: 413 EHLLSIEPENPGHYVMLSNIYALAGRMDRVEKIRNIMIRNRLKKEVGYSTIDVDHKVYLF 472

Query: 665 TSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAF 724
           + GD+ HP++  IY  L++L  + REAG+   + + +H+VEEEE+E  ++ HSEKLAIAF
Sbjct: 473 SMGDKSHPKTNQIYLYLDELMSRCREAGYIPASESVMHEVEEEEREYALRYHSEKLAIAF 532

Query: 725 GLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           GL+ T  G  IRI+KNLR+C DCHTA K+IS +  R I VRD  RFHHFK G CSC DYW
Sbjct: 533 GLLKTGSGVAIRIVKNLRMCEDCHTAIKYISIIANREINVRDRLRFHHFKDGSCSCQDYW 592



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 146/484 (30%), Positives = 227/484 (46%), Gaps = 51/484 (10%)

Query: 11  LFLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKL-AHRLSDFKATCYARALFFSIPK 69
           ++ S++        L Q HA+III G     S +TKL +   +      Y R LFFSIPK
Sbjct: 21  IYHSIILAGPRLKPLQQIHARIIITGLGRTRSLITKLLSFAYAAASPISYTRRLFFSIPK 80

Query: 70  PDLFLFNVIIRGFSNNEMPKSSI-CFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGV 128
           PD FLF+ +I   S    P+ S+ C+   L  N  ++  N+T+S V+ +++     SIG 
Sbjct: 81  PDTFLFHSLITLTSKFSFPQESLLCYRRMLLAN--ISSSNYTFSAVIKSSADLTAFSIGE 138

Query: 129 LLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNC 188
            +H H  + GYG D +V AALV  Y K   V  ARKVFDKMPEK  V WNSMISG  +N 
Sbjct: 139 TIHCHVYICGYGLDAYVQAALVSFYAKSGHVMIARKVFDKMPEKTVVAWNSMISGYEQNG 198

Query: 189 CFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVL 248
             ++++ +F  ++++ G   DS++  ++L A A+V  + LG  +     +  F  +V + 
Sbjct: 199 FGKEAVELFF-LMQDLGVKPDSSTFVSLLSACAQVGAIGLGFWVHEYIARNCFDLNVVLG 257

Query: 249 TGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAER 308
           T L++ YS+CG V +A  +F  +   ++++  AMISGY  +G    ++ LF ++     R
Sbjct: 258 TALMNMYSRCGNVSKAREVFDSMEEKNIVAWTAMISGYGMHGHGSQAIELFNEMSFDGPR 317

Query: 309 VNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKL 368
            N+ T V +           L+ C H+  +  G      + T +   Y  +  +E    +
Sbjct: 318 PNNVTFVAV-----------LSACAHAGLVDEG----RQIFTTMKQEYGLVPSVEHQVCM 362

Query: 369 FDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAI 428
            D            M+    + G   EA    +    S   P P   +++L AC      
Sbjct: 363 VD------------MLG---RAGHLNEAYQFIK--NTSPKEPAPAVWTAMLGACKMHKNF 405

Query: 429 SLGKWVHELVKSRNFE--------SNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVT 480
            LG  V E + S   E        SNIY     +D   K  NI+    L      K EV 
Sbjct: 406 DLGVEVAEHLLSIEPENPGHYVMLSNIYALAGRMDRVEKIRNIMIRNRL------KKEVG 459

Query: 481 WNTM 484
           ++T+
Sbjct: 460 YSTI 463



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 116/418 (27%), Positives = 200/418 (47%), Gaps = 8/418 (1%)

Query: 130 LHGHAIVSGYGSDLFVGAALVDL-YFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNC 188
           +H   I++G G    +   L+   Y   S +   R++F  +P+ DT L++S+I+   K  
Sbjct: 38  IHARIIITGLGRTRSLITKLLSFAYAAASPISYTRRLFFSIPKPDTFLFHSLITLTSKFS 97

Query: 189 CFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVL 248
             Q+S+  +  M+    +  + T  +AV+ + A++    +G  I C     G+    YV 
Sbjct: 98  FPQESLLCYRRMLLANISSSNYT-FSAVIKSSADLTAFSIGETIHCHVYICGYGLDAYVQ 156

Query: 249 TGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAER 308
             LVSFY+K G V  A  +F  +    +++ N+MISGY  NG  + ++ LF  +     +
Sbjct: 157 AALVSFYAKSGHVMIARKVFDKMPEKTVVAWNSMISGYEQNGFGKEAVELFFLMQDLGVK 216

Query: 309 VNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKL 368
            +SST V L+      G + L   +H +  ++    N  + TAL  +YSR   +  AR++
Sbjct: 217 PDSSTFVSLLSACAQVGAIGLGFWVHEYIARNCFDLNVVLGTALMNMYSRCGNVSKAREV 276

Query: 369 FDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAI 428
           FD   EK++ +W AMI+GY  +G   +AI LF EM      PN VT  ++LSACA  G +
Sbjct: 277 FDSMEEKNIVAWTAMISGYGMHGHGSQAIELFNEMSFDGPRPNNVTFVAVLSACAHAGLV 336

Query: 429 SLGKWVHELVKSR-NFESNIYVSTALIDMYAKCGNIVEARELFDLMSHK--SEVTWNTMI 485
             G+ +   +K       ++     ++DM  + G++ EA +     S K  +   W  M+
Sbjct: 337 DEGRQIFTTMKQEYGLVPSVEHQVCMVDMLGRAGHLNEAYQFIKNTSPKEPAPAVWTAML 396

Query: 486 SGYGLHGHGLEALQLFSEMLH-SGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHD 542
               +H +    +++   +L      P     LS +YA   AG +   ++I   MI +
Sbjct: 397 GACKMHKNFDLGVEVAEHLLSIEPENPGHYVMLSNIYAL--AGRMDRVEKIRNIMIRN 452


>gi|449477503|ref|XP_004155042.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18485-like [Cucumis sativus]
          Length = 990

 Score =  457 bits (1175), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 259/733 (35%), Positives = 402/733 (54%), Gaps = 14/733 (1%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEM-PKSSICFYTHLRKNTALTPDNFTYSFVLSAA 118
           A  LF  +P+ +L  +N +IRGFS N    ++   F + L     L PD  T   +L   
Sbjct: 264 AVELFDKMPEQNLISWNSLIRGFSENGFWLEAYRAFRSLLESGDGLIPDVATMVTLLPVC 323

Query: 119 SACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWN 178
           S   +  +G+++HG A+  G   +L V  AL+D+Y K   +  A  +F K+  K  V WN
Sbjct: 324 SGEGNVDVGMVIHGMAVKLGLVHELMVCNALIDMYSKCGCLSEAAILFRKIENKSVVSWN 383

Query: 179 SMISGLMKNCCFQDSIWVFGDMVRNGGTWLDS-------TSVAAVLPAVAEVQELRLGME 231
           SMI    +    +  ++   D++R    W++         ++  +LPA  E  EL     
Sbjct: 384 SMIGAYSR----EGFVFETFDLLRK--MWMEEELMEVNEVTILNLLPACLEESELLSLRA 437

Query: 232 IQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGK 291
           +    L+  F     +    ++ Y+KCG +  AE +F  +    + S NA+I G+  NG 
Sbjct: 438 LHGYSLRHSFQYKELINNAFIAAYAKCGSLVFAEHVFFGMNTKSVSSWNAVIGGHAQNGD 497

Query: 292 TESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTA 351
              +L  + ++       +  +IV L+      G L     IH F L++G+  NS V  +
Sbjct: 498 PIKALDFYFEMTRLGILPDDFSIVSLLLACGRLGLLQYGKEIHGFVLRNGLEMNSFVAVS 557

Query: 352 LSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPN 411
           L ++Y   ++    R  F+   +K+   WNAM++GY+QN L  EA+SLF++M +  + P+
Sbjct: 558 LLSLYFHCSKPFYGRTYFERMGDKNSVCWNAMLSGYSQNELPNEALSLFRQMLSDGLEPD 617

Query: 412 PVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFD 471
            + ++SIL AC+QL A+ LGK VH      +   + +V+ +L+DMYAK G +  ++ +F+
Sbjct: 618 EIAIASILGACSQLSALGLGKEVHCFALKNSLMEDNFVACSLMDMYAKSGFLGHSQRIFN 677

Query: 472 LMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVRE 531
            ++ K   +WN MI+G+G+HG G +A++LF +M  S  +P   TFL VL AC HAGLV E
Sbjct: 678 RLNGKEVASWNVMITGFGVHGQGNKAVELFEDMKRSDKQPDRFTFLGVLQACCHAGLVSE 737

Query: 532 GDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGAC 591
           G      M   +  +P  EHYAC++D+LGRAG+L +AL FI  +  EP   +W +LL + 
Sbjct: 738 GLNYLAQMQTLYKLEPELEHYACVIDMLGRAGRLNEALNFINEMPEEPDAKIWSSLLSSS 797

Query: 592 MIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPG 651
           + + D  +    +EKL  L+      ++LLSN+Y+    +     VRQ +K   L K  G
Sbjct: 798 ITYVDLEMGEKFAEKLLALEANKADSYILLSNLYATAGKWDVVRMVRQKMKDLSLQKDVG 857

Query: 652 CTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKEL 711
           C+ IE+ G  + F +G+  +P S  I  M  +L  ++ E G+  +    LH++EE EK  
Sbjct: 858 CSWIELRGKVYSFIAGENSNPSSDEIRKMWNRLEKQIVEIGYTPDCSCVLHELEEVEKRK 917

Query: 712 MMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFH 771
           ++K HSEK+AI FG + T+ GT +RI KNLR+C DCH A K+ISK   R IV+RD  RFH
Sbjct: 918 ILKGHSEKVAICFGFLNTKEGTTLRISKNLRICRDCHNAAKYISKAAKREIVIRDNKRFH 977

Query: 772 HFKGGVCSCGDYW 784
           HFK G+CSCGDYW
Sbjct: 978 HFKKGICSCGDYW 990



 Score =  265 bits (678), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 169/576 (29%), Positives = 279/576 (48%), Gaps = 23/576 (3%)

Query: 37  FQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYT 96
           F  D    T+L    S       +R +F  +   +LF +N ++ G+  NE+   +I  + 
Sbjct: 139 FSGDFVLNTRLITMYSICGYPLESRLVFDRLLNKNLFQWNALVSGYVRNELYDEAIHTFL 198

Query: 97  HLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKF 156
            L   T   PDNFT+  ++ A +  CD  +G  +HG A+  G   DLFVG A++ LY K 
Sbjct: 199 ELISVTEFQPDNFTFPCLIKACTGKCDIHLGKSVHGMAVKMGLIMDLFVGNAMIALYGKC 258

Query: 157 SWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNG-GTWLDSTSVAA 215
            ++  A ++FDKMPE++ + WNS+I G  +N  + ++   F  ++ +G G   D  ++  
Sbjct: 259 GFLDEAVELFDKMPEQNLISWNSLIRGFSENGFWLEAYRAFRSLLESGDGLIPDVATMVT 318

Query: 216 VLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPD 275
           +LP  +    + +GM I  + +KLG    + V   L+  YSKCG +  A +LFR I    
Sbjct: 319 LLPVCSGEGNVDVGMVIHGMAVKLGLVHELMVCNALIDMYSKCGCLSEAAILFRKIENKS 378

Query: 276 LISCNAMISGYTCNGKTESSLRLFRQLLASAE--RVNSSTIVGLIPVFYPFGHLHLTNCI 333
           ++S N+MI  Y+  G    +  L R++    E   VN  TI+ L+P       L     +
Sbjct: 379 VVSWNSMIGAYSREGFVFETFDLLRKMWMEEELMEVNEVTILNLLPACLEESELLSLRAL 438

Query: 334 HSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLT 393
           H + L+        +  A    Y++   +  A  +F   + KS++SWNA+I G+ QNG  
Sbjct: 439 HGYSLRHSFQYKELINNAFIAAYAKCGSLVFAEHVFFGMNTKSVSSWNAVIGGHAQNGDP 498

Query: 394 EEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTAL 453
            +A+  + EM    + P+  ++ S+L AC +LG +  GK +H  V     E N +V+ +L
Sbjct: 499 IKALDFYFEMTRLGILPDDFSIVSLLLACGRLGLLQYGKEIHGFVLRNGLEMNSFVAVSL 558

Query: 454 IDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSG 513
           + +Y  C      R  F+ M  K+ V WN M+SGY  +    EAL LF +ML  G+ P  
Sbjct: 559 LSLYFHCSKPFYGRTYFERMGDKNSVCWNAMLSGYSQNELPNEALSLFRQMLSDGLEPDE 618

Query: 514 VTFLSVLYACSHAGLVREGDEIF-----QSMIHDHGFKPLAEHYAC-MVDILGRAGQL-- 565
           +   S+L ACS    +  G E+       S++ D+         AC ++D+  ++G L  
Sbjct: 619 IAIASILGACSQLSALGLGKEVHCFALKNSLMEDN-------FVACSLMDMYAKSGFLGH 671

Query: 566 -EKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLA 600
            ++    + G  V    A W  ++    +H   N A
Sbjct: 672 SQRIFNRLNGKEV----ASWNVMITGFGVHGQGNKA 703



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 120/415 (28%), Positives = 215/415 (51%), Gaps = 11/415 (2%)

Query: 135 IVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSI 194
           + S +  D  +   L+ +Y    +   +R VFD++  K+   WN+++SG ++N  + ++I
Sbjct: 135 VSSQFSGDFVLNTRLITMYSICGYPLESRLVFDRLLNKNLFQWNALVSGYVRNELYDEAI 194

Query: 195 WVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSF 254
             F +++       D+ +   ++ A     ++ LG  +  + +K+G    ++V   +++ 
Sbjct: 195 HTFLELISVTEFQPDNFTFPCLIKACTGKCDIHLGKSVHGMAVKMGLIMDLFVGNAMIAL 254

Query: 255 YSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERV--NSS 312
           Y KCG ++ A  LF  +   +LIS N++I G++ NG    + R FR LL S + +  + +
Sbjct: 255 YGKCGFLDEAVELFDKMPEQNLISWNSLIRGFSENGFWLEAYRAFRSLLESGDGLIPDVA 314

Query: 313 TIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDES 372
           T+V L+PV    G++ +   IH   +K G+V    V  AL  +YS+   +  A  LF + 
Sbjct: 315 TMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVHELMVCNALIDMYSKCGCLSEAAILFRKI 374

Query: 373 SEKSLASWNAMIAGYTQNGLTEEAISLFQE--MQASKVAPNPVTVSSILSACAQLGAISL 430
             KS+ SWN+MI  Y++ G   E   L ++  M+   +  N VT+ ++L AC +   +  
Sbjct: 375 ENKSVVSWNSMIGAYSREGFVFETFDLLRKMWMEEELMEVNEVTILNLLPACLEESELLS 434

Query: 431 GKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGL 490
            + +H      +F+    ++ A I  YAKCG++V A  +F  M+ KS  +WN +I G+  
Sbjct: 435 LRALHGYSLRHSFQYKELINNAFIAAYAKCGSLVFAEHVFFGMNTKSVSSWNAVIGGHAQ 494

Query: 491 HGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGF 545
           +G  ++AL  + EM   GI P   + +S+L AC   GL++ G EI       HGF
Sbjct: 495 NGDPIKALDFYFEMTRLGILPDDFSIVSLLLACGRLGLLQYGKEI-------HGF 542



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 85/264 (32%), Positives = 135/264 (51%), Gaps = 17/264 (6%)

Query: 336 FCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEE 395
            C+ S    +  + T L T+YS       +R +FD    K+L  WNA+++GY +N L +E
Sbjct: 133 LCVSSQFSGDFVLNTRLITMYSICGYPLESRLVFDRLLNKNLFQWNALVSGYVRNELYDE 192

Query: 396 AISLFQEM-QASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALI 454
           AI  F E+   ++  P+  T   ++ AC     I LGK VH +        +++V  A+I
Sbjct: 193 AIHTFLELISVTEFQPDNFTFPCLIKACTGKCDIHLGKSVHGMAVKMGLIMDLFVGNAMI 252

Query: 455 DMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHS--GIRPS 512
            +Y KCG + EA ELFD M  ++ ++WN++I G+  +G  LEA + F  +L S  G+ P 
Sbjct: 253 ALYGKCGFLDEAVELFDKMPEQNLISWNSLIRGFSENGFWLEAYRAFRSLLESGDGLIPD 312

Query: 513 GVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFK--PLAEHYAC--MVDILGRAGQL-EK 567
             T +++L  CS  G V  G      +IH    K   + E   C  ++D+  + G L E 
Sbjct: 313 VATMVTLLPVCSGEGNVDVG-----MVIHGMAVKLGLVHELMVCNALIDMYSKCGCLSEA 367

Query: 568 ALEFIKGLAVEPGPAV-WGALLGA 590
           A+ F K   +E    V W +++GA
Sbjct: 368 AILFRK---IENKSVVSWNSMIGA 388



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 45/176 (25%), Positives = 85/176 (48%), Gaps = 7/176 (3%)

Query: 34  IHGF--QNDLSTVTKLAHRLSDFKATC----YARALFFSIPKPDLFLFNVIIRGFSNNEM 87
           IHGF  +N L   + +A  L      C    Y R  F  +   +   +N ++ G+S NE+
Sbjct: 539 IHGFVLRNGLEMNSFVAVSLLSLYFHCSKPFYGRTYFERMGDKNSVCWNAMLSGYSQNEL 598

Query: 88  PKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGA 147
           P  ++  +  +  +  L PD    + +L A S      +G  +H  A+ +    D FV  
Sbjct: 599 PNEALSLFRQMLSD-GLEPDEIAIASILGACSQLSALGLGKEVHCFALKNSLMEDNFVAC 657

Query: 148 ALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRN 203
           +L+D+Y K  ++  ++++F+++  K+   WN MI+G   +     ++ +F DM R+
Sbjct: 658 SLMDMYAKSGFLGHSQRIFNRLNGKEVASWNVMITGFGVHGQGNKAVELFEDMKRS 713



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/188 (27%), Positives = 90/188 (47%), Gaps = 14/188 (7%)

Query: 408 VAPNPVTVSSILSACAQLGAISLGKWVHE-LVKSRNFESNIYVSTALIDMYAKCGNIVEA 466
           +A     +  +L  C Q   + +G+ + E L  S  F  +  ++T LI MY+ CG  +E+
Sbjct: 103 LAQRKEAMGMLLQKCGQYKNVEIGRKLDEMLCVSSQFSGDFVLNTRLITMYSICGYPLES 162

Query: 467 RELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLH-SGIRPSGVTFLSVLYACS- 524
           R +FD + +K+   WN ++SGY  +    EA+  F E++  +  +P   TF  ++ AC+ 
Sbjct: 163 RLVFDRLLNKNLFQWNALVSGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCLIKACTG 222

Query: 525 ----HAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPG 580
               H G    G  +   +I D  F   A     M+ + G+ G L++A+E    +  E  
Sbjct: 223 KCDIHLGKSVHGMAVKMGLIMDL-FVGNA-----MIALYGKCGFLDEAVELFDKMP-EQN 275

Query: 581 PAVWGALL 588
              W +L+
Sbjct: 276 LISWNSLI 283


>gi|356506811|ref|XP_003522169.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Glycine max]
          Length = 751

 Score =  457 bits (1175), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 235/659 (35%), Positives = 377/659 (57%), Gaps = 2/659 (0%)

Query: 127 GVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMK 186
           G  LH   I  G   + F+    ++LY K   +    K+FDKM +++ V W S+I+G   
Sbjct: 94  GKQLHAMLIRGGCLPNTFLSNHFLNLYSKCGELDYTIKLFDKMSQRNMVSWTSIITGFAH 153

Query: 187 NCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVY 246
           N  FQ+++  F  M R  G      ++++VL A   +  ++ G ++ CL +K GF   ++
Sbjct: 154 NSRFQEALSSFCQM-RIEGEIATQFALSSVLQACTSLGAIQFGTQVHCLVVKCGFGCELF 212

Query: 247 VLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASA 306
           V + L   YSKCGE+  A   F ++   D +   +MI G+  NG  + +L  + +++   
Sbjct: 213 VGSNLTDMYSKCGELSDACKAFEEMPCKDAVLWTSMIDGFVKNGDFKKALTAYMKMVTDD 272

Query: 307 ERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAAR 366
             ++   +   +              +H+  LK G    + +  AL+ +YS+  +M +A 
Sbjct: 273 VFIDQHVLCSTLSACSALKASSFGKSLHATILKLGFEYETFIGNALTDMYSKSGDMVSAS 332

Query: 367 KLFDESSE-KSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQL 425
            +F   S+  S+ S  A+I GY +    E+A+S F +++   + PN  T +S++ ACA  
Sbjct: 333 NVFQIHSDCISIVSLTAIIDGYVEMDQIEKALSTFVDLRRRGIEPNEFTFTSLIKACANQ 392

Query: 426 GAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMI 485
             +  G  +H  V   NF+ + +VS+ L+DMY KCG    + +LFD + +  E+ WNT++
Sbjct: 393 AKLEHGSQLHGQVVKFNFKRDPFVSSTLVDMYGKCGLFDHSIQLFDEIENPDEIAWNTLV 452

Query: 486 SGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGF 545
             +  HG G  A++ F+ M+H G++P+ VTF+++L  CSHAG+V +G   F SM   +G 
Sbjct: 453 GVFSQHGLGRNAIETFNGMIHRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFSSMEKIYGV 512

Query: 546 KPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASE 605
            P  EHY+C++D+LGRAG+L++A +FI  +  EP    W + LGAC IH D   A+ A++
Sbjct: 513 VPKEEHYSCVIDLLGRAGKLKEAEDFINNMPFEPNVFGWCSFLGACKIHGDMERAKFAAD 572

Query: 606 KLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFT 665
           KL +L+PEN G HVLLSNIY+ E+ +    ++R+++K   + K PG + +++    HVF 
Sbjct: 573 KLMKLEPENSGAHVLLSNIYAKEKQWEDVQSLRKMIKDGNMNKLPGYSWVDIRNKTHVFG 632

Query: 666 SGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFG 725
             D  HPQ   IY  L+ L  +++  G+  +T + L D+++  KE ++  HSE++A+AF 
Sbjct: 633 VEDWSHPQKKEIYEKLDNLLDQIKRIGYVPQTESVLIDMDDNLKEKLLHYHSERIAVAFS 692

Query: 726 LIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           L+    G  I + KNLRVC DCH+A KFISKVT R I+VRD +RFHHF  G CSCGDYW
Sbjct: 693 LLTCPTGMPIIVKKNLRVCSDCHSALKFISKVTERNIIVRDISRFHHFSNGSCSCGDYW 751



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 30/127 (23%), Positives = 63/127 (49%), Gaps = 1/127 (0%)

Query: 78  IIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVS 137
           II G+   +  + ++  +  LR+   + P+ FT++ ++ A +       G  LHG  +  
Sbjct: 350 IIDGYVEMDQIEKALSTFVDLRRR-GIEPNEFTFTSLIKACANQAKLEHGSQLHGQVVKF 408

Query: 138 GYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVF 197
            +  D FV + LVD+Y K      + ++FD++   D + WN+++    ++   +++I  F
Sbjct: 409 NFKRDPFVSSTLVDMYGKCGLFDHSIQLFDEIENPDEIAWNTLVGVFSQHGLGRNAIETF 468

Query: 198 GDMVRNG 204
             M+  G
Sbjct: 469 NGMIHRG 475


>gi|356537109|ref|XP_003537073.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g11460-like [Glycine max]
          Length = 630

 Score =  457 bits (1175), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 252/618 (40%), Positives = 377/618 (61%), Gaps = 13/618 (2%)

Query: 174 TVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQ 233
           T  WN+ +  L K   +++++ ++  M+R+     ++ +   +L + A +       ++ 
Sbjct: 19  TTAWNNQLRQLSKQRQYREALTLYRHMLRSSFF-PNTFTFPFLLKSCAFLSLPLAASQLH 77

Query: 234 CLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTE 293
              ++ G     Y  + L++ Y+KC     A  +F ++  P  I  NAMISGY+ N K  
Sbjct: 78  AHVIRTGSQPDPYTRSSLINTYAKCSLHHHARKVFDEMPNPT-ICYNAMISGYSFNSKPL 136

Query: 294 SSLRLFRQLLASAE-------RVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNS 346
            ++ LFR++    E        VN+ T++ L+       HL +  C+H  C++ G V++ 
Sbjct: 137 HAVCLFRKMRREEEDGLDVDVNVNAVTLLSLVSGCSVATHLTIGVCLHGCCVRFGFVTDL 196

Query: 347 SVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQAS 406
           +V  +L T+Y +  E+E ARK+FDE   + L +WNAMI+GY QNG     + ++ EM+ S
Sbjct: 197 AVANSLVTMYVKCGEVELARKVFDEMLVRDLITWNAMISGYAQNGHARCVLEVYSEMKLS 256

Query: 407 KVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEA 466
            V+ + VT+  ++SACA LGA  +G+ V   ++ R F  N ++  AL++MYA+CGN+  A
Sbjct: 257 GVSADAVTLLGVMSACANLGAQGIGREVEREIERRGFGCNPFLRNALVNMYARCGNLTRA 316

Query: 467 RELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHA 526
           RE+FD    KS V+W  +I GYG+HGHG  AL+LF EM+ S +RP    F+SVL ACSHA
Sbjct: 317 REVFDRSGEKSVVSWTAIIGGYGIHGHGEVALELFDEMVESAVRPDKTVFVSVLSACSHA 376

Query: 527 GLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGA 586
           GL   G E F+ M   +G +P  EHY+C+VD+LGRAG+LE+A+  IK + V+P  AVWGA
Sbjct: 377 GLTDRGLEYFKEMERKYGLQPGPEHYSCVVDLLGRAGRLEEAVNLIKSMKVKPDGAVWGA 436

Query: 587 LLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKL 646
           LLGAC IHK+  +A +A + + EL+P N+GY+VLLSNIY+   +    + VR ++++RKL
Sbjct: 437 LLGACKIHKNAEIAELAFQHVVELEPTNIGYYVLLSNIYTDANNLEGVSRVRVMMRERKL 496

Query: 647 AKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEE 706
            K PG + +E  G  ++F SGD  HPQ+  IY ML++L   ++E     E          
Sbjct: 497 RKDPGYSYVEYKGKMNLFYSGDLSHPQTKQIYRMLDELESLVKEVHPPNEKCQG----RS 552

Query: 707 EEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRD 766
           EE  +   VHSEKLAIAF L+ T+ GTEI ++KNLRVC+DCH   K +SK+  R  +VRD
Sbjct: 553 EELLIGTGVHSEKLAIAFALLNTKSGTEITVMKNLRVCVDCHLFIKLVSKIVNRQFIVRD 612

Query: 767 ANRFHHFKGGVCSCGDYW 784
           A RFHHF+ G+CSC DYW
Sbjct: 613 ATRFHHFRDGICSCKDYW 630



 Score =  129 bits (323), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 116/417 (27%), Positives = 194/417 (46%), Gaps = 47/417 (11%)

Query: 12  FLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPD 71
           FLSL   A      +Q HA +I  G Q D  T + L +  +      +AR +F  +P P 
Sbjct: 66  FLSLPLAA------SQLHAHVIRTGSQPDPYTRSSLINTYAKCSLHHHARKVFDEMPNPT 119

Query: 72  LFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPD---NFTYSFVLSAASAC---CDRS 125
           +  +N +I G+S N  P  ++C +  +R+      D   N     +LS  S C      +
Sbjct: 120 I-CYNAMISGYSFNSKPLHAVCLFRKMRREEEDGLDVDVNVNAVTLLSLVSGCSVATHLT 178

Query: 126 IGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLM 185
           IGV LHG  +  G+ +DL V  +LV +Y K   V+ ARKVFD+M  +D + WN+MISG  
Sbjct: 179 IGVCLHGCCVRFGFVTDLAVANSLVTMYVKCGEVELARKVFDEMLVRDLITWNAMISGYA 238

Query: 186 KNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHV 245
           +N   +  + V+ +M +  G   D+ ++  V+ A A +    +G E++    + GF  + 
Sbjct: 239 QNGHARCVLEVYSEM-KLSGVSADAVTLLGVMSACANLGAQGIGREVEREIERRGFGCNP 297

Query: 246 YVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLAS 305
           ++   LV+ Y++CG + RA  +F       ++S  A+I GY  +G  E +L LF +++ S
Sbjct: 298 FLRNALVNMYARCGNLTRAREVFDRSGEKSVVSWTAIIGGYGIHGHGEVALELFDEMVES 357

Query: 306 AERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAA 365
           A R + +  V +           L+ C H+     G+                  EME  
Sbjct: 358 AVRPDKTVFVSV-----------LSACSHAGLTDRGL--------------EYFKEMERK 392

Query: 366 RKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSAC 422
             L     +     ++ ++    + G  EEA++L + M   KV P+     ++L AC
Sbjct: 393 YGL-----QPGPEHYSCVVDLLGRAGRLEEAVNLIKSM---KVKPDGAVWGALLGAC 441


>gi|449448280|ref|XP_004141894.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
           chloroplastic-like [Cucumis sativus]
 gi|449513125|ref|XP_004164238.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
           chloroplastic-like [Cucumis sativus]
          Length = 645

 Score =  456 bits (1174), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 205/436 (47%), Positives = 295/436 (67%)

Query: 349 LTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKV 408
           LT + T YS++ E++ AR LF+   E+ +  WN MI GY Q+G+  E++ LF+ M  +K 
Sbjct: 210 LTTMLTCYSKMGELDKARSLFEGMKERDVVCWNVMIGGYAQSGVPNESLKLFRRMLVAKA 269

Query: 409 APNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARE 468
            PN VTV ++LSAC QLGA+  G+W+H  ++++  + N++V TALIDMY+KCG++ +AR 
Sbjct: 270 IPNEVTVLAVLSACGQLGALESGRWIHSYIENKGIQINVHVGTALIDMYSKCGSLEDARL 329

Query: 469 LFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGL 528
           +FD +  K  V WN+MI GY +HG    ALQLF EM  +G +P+ +TF+ +L AC H GL
Sbjct: 330 VFDRIRDKDVVAWNSMIVGYAMHGFSQHALQLFEEMTETGHKPTDITFIGILSACGHGGL 389

Query: 529 VREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALL 588
           V EG   F+ M   +G +P  EHY CMV++LGRAG LE+A   +K + +   P +WG LL
Sbjct: 390 VEEGRSFFRLMRDKYGIEPKIEHYGCMVNLLGRAGHLEEAYGLVKNMTIAADPVLWGTLL 449

Query: 589 GACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAK 648
           G C +H +  L    ++ L +    N G +VLLSN+Y+A  ++   A +R ++K+  + K
Sbjct: 450 GCCRLHVNIKLGEEIAKFLVDQKLANSGTYVLLSNMYAATGNWEGVAKMRTLMKEHGIEK 509

Query: 649 APGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEE 708
             GC+ IEV    H F +G++ HP+S  IY ML ++N  ++  G+  +T   LHD+ EE+
Sbjct: 510 EHGCSSIEVDNKVHEFVAGERKHPKSKEIYVMLNEINSWLKARGYTPQTDVVLHDLREEQ 569

Query: 709 KELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDAN 768
           KE  ++VHSEKLAIAFGLI+T+PGT ++I+KNLRVC DCHT  K IS++TGR IV+RD N
Sbjct: 570 KEQSLEVHSEKLAIAFGLISTKPGTTVKIVKNLRVCSDCHTVMKMISEITGRKIVMRDRN 629

Query: 769 RFHHFKGGVCSCGDYW 784
           RFHHF+ G+CSCGDYW
Sbjct: 630 RFHHFEDGLCSCGDYW 645



 Score =  143 bits (360), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 128/488 (26%), Positives = 210/488 (43%), Gaps = 73/488 (14%)

Query: 7   QSRNLFLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFS 66
           Q    F SL+  +K+ + L Q HA ++  G  ++     KL    +       +  +F +
Sbjct: 45  QEVERFASLIDKSKSVAHLLQIHASLLRRGLYHNPILNFKLQRSYAALGRLDCSVFVFNT 104

Query: 67  IPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSI 126
             +P++F F+ II     + +   +  +Y+ +  +  + P+ FT+S VL +    C    
Sbjct: 105 FDEPNVFSFSAIIHSHVQSRLFDRAFGYYSQML-SCGVEPNAFTFSSVLKS----CSLES 159

Query: 127 GVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEK-------------- 172
           G +LH  AI  G GSDL+V   LVD+Y +   V  AR++FDKMPE+              
Sbjct: 160 GKVLHCQAIKLGLGSDLYVRTGLVDVYARGGDVVCARQLFDKMPERSLVSLTTMLTCYSK 219

Query: 173 -----------------DTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAA 215
                            D V WN MI G  ++    +S+ +F  M+       +  +V A
Sbjct: 220 MGELDKARSLFEGMKERDVVCWNVMIGGYAQSGVPNESLKLFRRMLVAKAI-PNEVTVLA 278

Query: 216 VLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPD 275
           VL A  ++  L  G  I       G   +V+V T L+  YSKCG +E A L+F  I   D
Sbjct: 279 VLSACGQLGALESGRWIHSYIENKGIQINVHVGTALIDMYSKCGSLEDARLVFDRIRDKD 338

Query: 276 LISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHS 335
           +++ N+MI GY  +G ++ +L+LF ++  +  +    T +G+           L+ C H 
Sbjct: 339 VVAWNSMIVGYAMHGFSQHALQLFEEMTETGHKPTDITFIGI-----------LSACGHG 387

Query: 336 FCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEE 395
             ++ G     S    +   Y                 E  +  +  M+    + G  EE
Sbjct: 388 GLVEEG----RSFFRLMRDKY---------------GIEPKIEHYGCMVNLLGRAGHLEE 428

Query: 396 AISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHE-LVKSRNFESNIYVSTALI 454
           A  L + M    +A +PV   ++L  C     I LG+ + + LV  +   S  YV   L 
Sbjct: 429 AYGLVKNMT---IAADPVLWGTLLGCCRLHVNIKLGEEIAKFLVDQKLANSGTYV--LLS 483

Query: 455 DMYAKCGN 462
           +MYA  GN
Sbjct: 484 NMYAATGN 491



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 115/449 (25%), Positives = 204/449 (45%), Gaps = 50/449 (11%)

Query: 165 VFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQ 224
           VF+   E +   ++++I   +++  F  +   +  M+ + G   ++ + ++VL + +   
Sbjct: 101 VFNTFDEPNVFSFSAIIHSHVQSRLFDRAFGYYSQML-SCGVEPNAFTFSSVLKSCS--- 156

Query: 225 ELRLGMEIQCLGLKLGFHDHVYVLTGLVSFY----------------------------- 255
            L  G  + C  +KLG    +YV TGLV  Y                             
Sbjct: 157 -LESGKVLHCQAIKLGLGSDLYVRTGLVDVYARGGDVVCARQLFDKMPERSLVSLTTMLT 215

Query: 256 --SKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSST 313
             SK GE+++A  LF  +   D++  N MI GY  +G    SL+LFR++L +    N  T
Sbjct: 216 CYSKMGELDKARSLFEGMKERDVVCWNVMIGGYAQSGVPNESLKLFRRMLVAKAIPNEVT 275

Query: 314 IVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESS 373
           ++ ++      G L     IHS+    GI  N  V TAL  +YS+   +E AR +FD   
Sbjct: 276 VLAVLSACGQLGALESGRWIHSYIENKGIQINVHVGTALIDMYSKCGSLEDARLVFDRIR 335

Query: 374 EKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKW 433
           +K + +WN+MI GY  +G ++ A+ LF+EM  +   P  +T   ILSAC   G +  G+ 
Sbjct: 336 DKDVVAWNSMIVGYAMHGFSQHALQLFEEMTETGHKPTDITFIGILSACGHGGLVEEGRS 395

Query: 434 VHELVKSR-NFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSE-VTWNTMISGYGLH 491
              L++ +   E  I     ++++  + G++ EA  L   M+  ++ V W T++    LH
Sbjct: 396 FFRLMRDKYGIEPKIEHYGCMVNLLGRAGHLEEAYGLVKNMTIAADPVLWGTLLGCCRLH 455

Query: 492 GHGLEALQLFSEMLHSGIRPSGV-TFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAE 550
            +     ++   ++   +  SG    LS +YA +      EG    ++++ +HG +   E
Sbjct: 456 VNIKLGEEIAKFLVDQKLANSGTYVLLSNMYAATGNW---EGVAKMRTLMKEHGIEK--E 510

Query: 551 HYACMVDILGRAGQLEKALEFIKGLAVEP 579
           H    +++        K  EF+ G    P
Sbjct: 511 HGCSSIEV------DNKVHEFVAGERKHP 533



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 78/267 (29%), Positives = 126/267 (47%), Gaps = 36/267 (13%)

Query: 333 IHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGL 392
           IH+  L+ G+  N  +   L   Y+ L  ++ +  +F+   E ++ S++A+I  + Q+ L
Sbjct: 66  IHASLLRRGLYHNPILNFKLQRSYAALGRLDCSVFVFNTFDEPNVFSFSAIIHSHVQSRL 125

Query: 393 TEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTA 452
            + A   + +M +  V PN  T SS+L +C+    +  GK +H         S++YV T 
Sbjct: 126 FDRAFGYYSQMLSCGVEPNAFTFSSVLKSCS----LESGKVLHCQAIKLGLGSDLYVRTG 181

Query: 453 LIDMYAKCGNIVEARELFDLMSHKSEVT-------------------------------W 481
           L+D+YA+ G++V AR+LFD M  +S V+                               W
Sbjct: 182 LVDVYARGGDVVCARQLFDKMPERSLVSLTTMLTCYSKMGELDKARSLFEGMKERDVVCW 241

Query: 482 NTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIH 541
           N MI GY   G   E+L+LF  ML +   P+ VT L+VL AC   G +  G  I  S I 
Sbjct: 242 NVMIGGYAQSGVPNESLKLFRRMLVAKAIPNEVTVLAVLSACGQLGALESGRWI-HSYIE 300

Query: 542 DHGFKPLAEHYACMVDILGRAGQLEKA 568
           + G +        ++D+  + G LE A
Sbjct: 301 NKGIQINVHVGTALIDMYSKCGSLEDA 327


>gi|356546233|ref|XP_003541534.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g33760-like [Glycine max]
          Length = 582

 Score =  456 bits (1174), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 222/546 (40%), Positives = 341/546 (62%), Gaps = 1/546 (0%)

Query: 240 GFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLF 299
           G H    +LT L++     G +     LFR +  PD    N++I   +  G +  ++  +
Sbjct: 37  GCHRSRALLTKLLTLSCAAGSIAYTRRLFRSVSDPDSFLFNSLIKASSKFGFSLDAVLFY 96

Query: 300 RQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRL 359
           R++L S    ++ T   +I        L +   +HS    SG  S+S V  AL   Y++ 
Sbjct: 97  RRMLLSRIVPSTYTFTSVIKACADLSLLCIGTLVHSHVFVSGYASDSFVQAALIAFYAKS 156

Query: 360 NEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSIL 419
                ARK+FDE  ++S+ +WN+MI+GY QNGL  EA+ +F +M+ S+V P+  T  S+L
Sbjct: 157 CTPRVARKVFDEMPQRSIVAWNSMISGYEQNGLANEAVEVFNKMRESRVEPDSATFVSVL 216

Query: 420 SACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEV 479
           SAC+QLG++  G W+H+ +       N+ ++T+L++M+++CG++  AR +F  M   + V
Sbjct: 217 SACSQLGSLDFGCWLHDCIVGSGITMNVVLATSLVNMFSRCGDVGRARAVFYSMIEGNVV 276

Query: 480 TWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSM 539
            W  MISGYG+HG+G+EA+++F  M   G+ P+ VTF++VL AC+HAGL+ EG  +F SM
Sbjct: 277 LWTAMISGYGMHGYGVEAMEVFHRMKARGVVPNSVTFVAVLSACAHAGLIDEGRSVFASM 336

Query: 540 IHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGL-AVEPGPAVWGALLGACMIHKDTN 598
             ++G  P  EH+ CMVD+ GR G L +A +F+KGL + E  PAVW A+LGAC +HK+ +
Sbjct: 337 KQEYGVVPGVEHHVCMVDMFGRGGLLNEAYQFVKGLNSDELVPAVWTAMLGACKMHKNFD 396

Query: 599 LARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVG 658
           L    +E L   +PEN G++VLLSN+Y+      +  +VR V+ +R L K  G + I+V 
Sbjct: 397 LGVEVAENLINAEPENPGHYVLLSNMYALAGRMDRVESVRNVMIQRGLKKQVGYSTIDVD 456

Query: 659 GTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSE 718
              ++F+ GD+ HP++  IY  L++L  + ++AG+     +A+H++E EE+E  ++ HSE
Sbjct: 457 NRSYLFSMGDKSHPETNEIYCFLDELIWRCKDAGYAPVPESAMHELEGEEREYALRYHSE 516

Query: 719 KLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVC 778
           KLA+AFGL+ T  G  +RI+KNLR+C DCH+A KFIS V  R I+VRD  RFHHF+ G C
Sbjct: 517 KLAVAFGLMKTGDGVTLRIVKNLRICEDCHSAIKFISAVMNREIIVRDKLRFHHFREGSC 576

Query: 779 SCGDYW 784
           SC DYW
Sbjct: 577 SCSDYW 582



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 135/468 (28%), Positives = 218/468 (46%), Gaps = 46/468 (9%)

Query: 24  QLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFS 83
           +L Q HA +++ G     + +TKL        +  Y R LF S+  PD FLFN +I+  S
Sbjct: 25  RLQQAHAHLVVTGCHRSRALLTKLLTLSCAAGSIAYTRRLFRSVSDPDSFLFNSLIKASS 84

Query: 84  NNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRS---IGVLLHGHAIVSGYG 140
                  ++ FY  +   + + P  +T++ V+ A   C D S   IG L+H H  VSGY 
Sbjct: 85  KFGFSLDAVLFYRRMLL-SRIVPSTYTFTSVIKA---CADLSLLCIGTLVHSHVFVSGYA 140

Query: 141 SDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDM 200
           SD FV AAL+  Y K    + ARKVFD+MP++  V WNSMISG  +N    +++ VF  M
Sbjct: 141 SDSFVQAALIAFYAKSCTPRVARKVFDEMPQRSIVAWNSMISGYEQNGLANEAVEVFNKM 200

Query: 201 VRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGE 260
            R      DS +  +VL A +++  L  G  +    +  G   +V + T LV+ +S+CG+
Sbjct: 201 -RESRVEPDSATFVSVLSACSQLGSLDFGCWLHDCIVGSGITMNVVLATSLVNMFSRCGD 259

Query: 261 VERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPV 320
           V RA  +F  ++  +++   AMISGY  +G    ++ +F ++ A     NS T V +   
Sbjct: 260 VGRARAVFYSMIEGNVVLWTAMISGYGMHGYGVEAMEVFHRMKARGVVPNSVTFVAV--- 316

Query: 321 FYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASW 380
                   L+ C H+  +  G     SV  ++   Y  +  +E                 
Sbjct: 317 --------LSACAHAGLIDEG----RSVFASMKQEYGVVPGVE---------------HH 349

Query: 381 NAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHE-LVK 439
             M+  + + GL  EA    + + + ++ P   T  ++L AC       LG  V E L+ 
Sbjct: 350 VCMVDMFGRGGLLNEAYQFVKGLNSDELVPAVWT--AMLGACKMHKNFDLGVEVAENLIN 407

Query: 440 SRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSH---KSEVTWNTM 484
           +       YV   L +MYA  G +     + ++M     K +V ++T+
Sbjct: 408 AEPENPGHYV--LLSNMYALAGRMDRVESVRNVMIQRGLKKQVGYSTI 453



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 100/397 (25%), Positives = 187/397 (47%), Gaps = 7/397 (1%)

Query: 131 HGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCF 190
           H H +V+G      +   L+ L      +   R++F  + + D+ L+NS+I    K    
Sbjct: 30  HAHLVVTGCHRSRALLTKLLTLSCAAGSIAYTRRLFRSVSDPDSFLFNSLIKASSKFGFS 89

Query: 191 QDSIWVFGDMVRNGGTWLDST-SVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLT 249
            D++  +  M+ +    + ST +  +V+ A A++  L +G  +       G+    +V  
Sbjct: 90  LDAVLFYRRMLLS--RIVPSTYTFTSVIKACADLSLLCIGTLVHSHVFVSGYASDSFVQA 147

Query: 250 GLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERV 309
            L++FY+K      A  +F ++ +  +++ N+MISGY  NG    ++ +F ++  S    
Sbjct: 148 ALIAFYAKSCTPRVARKVFDEMPQRSIVAWNSMISGYEQNGLANEAVEVFNKMRESRVEP 207

Query: 310 NSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLF 369
           +S+T V ++      G L     +H   + SGI  N  + T+L  ++SR  ++  AR +F
Sbjct: 208 DSATFVSVLSACSQLGSLDFGCWLHDCIVGSGITMNVVLATSLVNMFSRCGDVGRARAVF 267

Query: 370 DESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAIS 429
               E ++  W AMI+GY  +G   EA+ +F  M+A  V PN VT  ++LSACA  G I 
Sbjct: 268 YSMIEGNVVLWTAMISGYGMHGYGVEAMEVFHRMKARGVVPNSVTFVAVLSACAHAGLID 327

Query: 430 LGKWVHELVKSR-NFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEV--TWNTMIS 486
            G+ V   +K        +     ++DM+ + G + EA +    ++    V   W  M+ 
Sbjct: 328 EGRSVFASMKQEYGVVPGVEHHVCMVDMFGRGGLLNEAYQFVKGLNSDELVPAVWTAMLG 387

Query: 487 GYGLHGHGLEALQLFSEMLHSGIR-PSGVTFLSVLYA 522
              +H +    +++   ++++    P     LS +YA
Sbjct: 388 ACKMHKNFDLGVEVAENLINAEPENPGHYVLLSNMYA 424



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 79/273 (28%), Positives = 135/273 (49%), Gaps = 10/273 (3%)

Query: 326 HLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIA 385
           HL      H+  + +G   + ++LT L T+      +   R+LF   S+     +N++I 
Sbjct: 22  HLRRLQQAHAHLVVTGCHRSRALLTKLLTLSCAAGSIAYTRRLFRSVSDPDSFLFNSLIK 81

Query: 386 GYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFES 445
             ++ G + +A+  ++ M  S++ P+  T +S++ ACA L  + +G  VH  V    + S
Sbjct: 82  ASSKFGFSLDAVLFYRRMLLSRIVPSTYTFTSVIKACADLSLLCIGTLVHSHVFVSGYAS 141

Query: 446 NIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEML 505
           + +V  ALI  YAK      AR++FD M  +S V WN+MISGY  +G   EA+++F++M 
Sbjct: 142 DSFVQAALIAFYAKSCTPRVARKVFDEMPQRSIVAWNSMISGYEQNGLANEAVEVFNKMR 201

Query: 506 HSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHD----HGFKPLAEHYACMVDILGR 561
            S + P   TF+SVL ACS  G +      F   +HD     G          +V++  R
Sbjct: 202 ESRVEPDSATFVSVLSACSQLGSLD-----FGCWLHDCIVGSGITMNVVLATSLVNMFSR 256

Query: 562 AGQLEKALEFIKGLAVEPGPAVWGALLGACMIH 594
            G + +A      + +E    +W A++    +H
Sbjct: 257 CGDVGRARAVFYSM-IEGNVVLWTAMISGYGMH 288


>gi|449441113|ref|XP_004138328.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18485-like [Cucumis sativus]
          Length = 990

 Score =  456 bits (1174), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 259/733 (35%), Positives = 402/733 (54%), Gaps = 14/733 (1%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEM-PKSSICFYTHLRKNTALTPDNFTYSFVLSAA 118
           A  LF  +P+ +L  +N +IRGFS N    ++   F + L     L PD  T   +L   
Sbjct: 264 AVELFDKMPEQNLISWNSLIRGFSENGFWLEAYRAFRSLLESGDGLIPDVATMVTLLPVC 323

Query: 119 SACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWN 178
           S   +  +G+++HG A+  G   +L V  AL+D+Y K   +  A  +F K+  K  V WN
Sbjct: 324 SGEGNVDVGMVIHGMAVKLGLVHELMVCNALIDMYSKCGCLSEAAILFRKIENKSVVSWN 383

Query: 179 SMISGLMKNCCFQDSIWVFGDMVRNGGTWLDS-------TSVAAVLPAVAEVQELRLGME 231
           SMI    +    +  ++   D++R    W++         ++  +LPA  E  EL     
Sbjct: 384 SMIGAYSR----EGFVFETFDLLRK--MWMEEELMEVNEVTILNLLPACLEESELLSLRA 437

Query: 232 IQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGK 291
           +    L+  F     +    ++ Y+KCG +  AE +F  +    + S NA+I G+  NG 
Sbjct: 438 LHGYSLRHSFQYKELINNAFIAAYAKCGSLVFAEHVFFGMNTKSVSSWNAVIGGHAQNGD 497

Query: 292 TESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTA 351
              +L  + ++       +  +IV L+      G L     IH F L++G+  NS V  +
Sbjct: 498 PIKALDFYFEMTRLGILPDDFSIVSLLLACGRLGLLQYGKEIHGFVLRNGLEMNSFVAVS 557

Query: 352 LSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPN 411
           L ++Y   ++    R  F+   +K+   WNAM++GY+QN L  EA+SLF++M +  + P+
Sbjct: 558 LLSLYFHCSKPFYGRTYFETMGDKNSVCWNAMLSGYSQNELPNEALSLFRQMLSDGLEPD 617

Query: 412 PVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFD 471
            + ++SIL AC+QL A+ LGK VH      +   + +V+ +L+DMYAK G +  ++ +F+
Sbjct: 618 EIAIASILGACSQLSALGLGKEVHCFALKNSLMEDNFVACSLMDMYAKSGFLGHSQRIFN 677

Query: 472 LMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVRE 531
            ++ K   +WN MI+G+G+HG G +A++LF +M  S  +P   TFL VL AC HAGLV E
Sbjct: 678 RLNGKEVASWNVMITGFGVHGQGNKAVELFEDMKRSDKQPDRFTFLGVLQACCHAGLVSE 737

Query: 532 GDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGAC 591
           G      M   +  +P  EHYAC++D+LGRAG+L +AL FI  +  EP   +W +LL + 
Sbjct: 738 GLNYLAQMQTLYKLEPELEHYACVIDMLGRAGRLNEALNFINEMPEEPDAKIWSSLLSSS 797

Query: 592 MIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPG 651
           + + D  +    +EKL  L+      ++LLSN+Y+    +     VRQ +K   L K  G
Sbjct: 798 ITYVDLEMGEKFAEKLLALEANKADSYILLSNLYATAGKWDVVRMVRQKMKDLSLQKDVG 857

Query: 652 CTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKEL 711
           C+ IE+ G  + F +G+  +P S  I  M  +L  ++ E G+  +    LH++EE EK  
Sbjct: 858 CSWIELRGKVYSFIAGENSNPSSDEIRKMWNRLEKQIVEIGYTPDCSCVLHELEEVEKRK 917

Query: 712 MMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFH 771
           ++K HSEK+AI FG + T+ GT +RI KNLR+C DCH A K+ISK   R IV+RD  RFH
Sbjct: 918 ILKGHSEKVAICFGFLNTKEGTTLRISKNLRICRDCHNAAKYISKAAKREIVIRDNKRFH 977

Query: 772 HFKGGVCSCGDYW 784
           HFK G+CSCGDYW
Sbjct: 978 HFKKGICSCGDYW 990



 Score =  265 bits (678), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 169/576 (29%), Positives = 279/576 (48%), Gaps = 23/576 (3%)

Query: 37  FQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYT 96
           F  D    T+L    S       +R +F  +   +LF +N ++ G+  NE+   +I  + 
Sbjct: 139 FSGDFVLNTRLITMYSICGYPLESRLVFDRLLNKNLFQWNALVSGYVRNELYDEAIHTFL 198

Query: 97  HLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKF 156
            L   T   PDNFT+  ++ A +  CD  +G  +HG A+  G   DLFVG A++ LY K 
Sbjct: 199 ELISVTEFQPDNFTFPCLIKACTGKCDIHLGKSVHGMAVKMGLIMDLFVGNAMIALYGKC 258

Query: 157 SWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNG-GTWLDSTSVAA 215
            ++  A ++FDKMPE++ + WNS+I G  +N  + ++   F  ++ +G G   D  ++  
Sbjct: 259 GFLDEAVELFDKMPEQNLISWNSLIRGFSENGFWLEAYRAFRSLLESGDGLIPDVATMVT 318

Query: 216 VLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPD 275
           +LP  +    + +GM I  + +KLG    + V   L+  YSKCG +  A +LFR I    
Sbjct: 319 LLPVCSGEGNVDVGMVIHGMAVKLGLVHELMVCNALIDMYSKCGCLSEAAILFRKIENKS 378

Query: 276 LISCNAMISGYTCNGKTESSLRLFRQLLASAE--RVNSSTIVGLIPVFYPFGHLHLTNCI 333
           ++S N+MI  Y+  G    +  L R++    E   VN  TI+ L+P       L     +
Sbjct: 379 VVSWNSMIGAYSREGFVFETFDLLRKMWMEEELMEVNEVTILNLLPACLEESELLSLRAL 438

Query: 334 HSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLT 393
           H + L+        +  A    Y++   +  A  +F   + KS++SWNA+I G+ QNG  
Sbjct: 439 HGYSLRHSFQYKELINNAFIAAYAKCGSLVFAEHVFFGMNTKSVSSWNAVIGGHAQNGDP 498

Query: 394 EEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTAL 453
            +A+  + EM    + P+  ++ S+L AC +LG +  GK +H  V     E N +V+ +L
Sbjct: 499 IKALDFYFEMTRLGILPDDFSIVSLLLACGRLGLLQYGKEIHGFVLRNGLEMNSFVAVSL 558

Query: 454 IDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSG 513
           + +Y  C      R  F+ M  K+ V WN M+SGY  +    EAL LF +ML  G+ P  
Sbjct: 559 LSLYFHCSKPFYGRTYFETMGDKNSVCWNAMLSGYSQNELPNEALSLFRQMLSDGLEPDE 618

Query: 514 VTFLSVLYACSHAGLVREGDEIF-----QSMIHDHGFKPLAEHYAC-MVDILGRAGQL-- 565
           +   S+L ACS    +  G E+       S++ D+         AC ++D+  ++G L  
Sbjct: 619 IAIASILGACSQLSALGLGKEVHCFALKNSLMEDN-------FVACSLMDMYAKSGFLGH 671

Query: 566 -EKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLA 600
            ++    + G  V    A W  ++    +H   N A
Sbjct: 672 SQRIFNRLNGKEV----ASWNVMITGFGVHGQGNKA 703



 Score =  195 bits (495), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 120/415 (28%), Positives = 215/415 (51%), Gaps = 11/415 (2%)

Query: 135 IVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSI 194
           + S +  D  +   L+ +Y    +   +R VFD++  K+   WN+++SG ++N  + ++I
Sbjct: 135 VSSQFSGDFVLNTRLITMYSICGYPLESRLVFDRLLNKNLFQWNALVSGYVRNELYDEAI 194

Query: 195 WVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSF 254
             F +++       D+ +   ++ A     ++ LG  +  + +K+G    ++V   +++ 
Sbjct: 195 HTFLELISVTEFQPDNFTFPCLIKACTGKCDIHLGKSVHGMAVKMGLIMDLFVGNAMIAL 254

Query: 255 YSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERV--NSS 312
           Y KCG ++ A  LF  +   +LIS N++I G++ NG    + R FR LL S + +  + +
Sbjct: 255 YGKCGFLDEAVELFDKMPEQNLISWNSLIRGFSENGFWLEAYRAFRSLLESGDGLIPDVA 314

Query: 313 TIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDES 372
           T+V L+PV    G++ +   IH   +K G+V    V  AL  +YS+   +  A  LF + 
Sbjct: 315 TMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVHELMVCNALIDMYSKCGCLSEAAILFRKI 374

Query: 373 SEKSLASWNAMIAGYTQNGLTEEAISLFQE--MQASKVAPNPVTVSSILSACAQLGAISL 430
             KS+ SWN+MI  Y++ G   E   L ++  M+   +  N VT+ ++L AC +   +  
Sbjct: 375 ENKSVVSWNSMIGAYSREGFVFETFDLLRKMWMEEELMEVNEVTILNLLPACLEESELLS 434

Query: 431 GKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGL 490
            + +H      +F+    ++ A I  YAKCG++V A  +F  M+ KS  +WN +I G+  
Sbjct: 435 LRALHGYSLRHSFQYKELINNAFIAAYAKCGSLVFAEHVFFGMNTKSVSSWNAVIGGHAQ 494

Query: 491 HGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGF 545
           +G  ++AL  + EM   GI P   + +S+L AC   GL++ G EI       HGF
Sbjct: 495 NGDPIKALDFYFEMTRLGILPDDFSIVSLLLACGRLGLLQYGKEI-------HGF 542



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 85/264 (32%), Positives = 135/264 (51%), Gaps = 17/264 (6%)

Query: 336 FCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEE 395
            C+ S    +  + T L T+YS       +R +FD    K+L  WNA+++GY +N L +E
Sbjct: 133 LCVSSQFSGDFVLNTRLITMYSICGYPLESRLVFDRLLNKNLFQWNALVSGYVRNELYDE 192

Query: 396 AISLFQEM-QASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALI 454
           AI  F E+   ++  P+  T   ++ AC     I LGK VH +        +++V  A+I
Sbjct: 193 AIHTFLELISVTEFQPDNFTFPCLIKACTGKCDIHLGKSVHGMAVKMGLIMDLFVGNAMI 252

Query: 455 DMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHS--GIRPS 512
            +Y KCG + EA ELFD M  ++ ++WN++I G+  +G  LEA + F  +L S  G+ P 
Sbjct: 253 ALYGKCGFLDEAVELFDKMPEQNLISWNSLIRGFSENGFWLEAYRAFRSLLESGDGLIPD 312

Query: 513 GVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFK--PLAEHYAC--MVDILGRAGQL-EK 567
             T +++L  CS  G V  G      +IH    K   + E   C  ++D+  + G L E 
Sbjct: 313 VATMVTLLPVCSGEGNVDVG-----MVIHGMAVKLGLVHELMVCNALIDMYSKCGCLSEA 367

Query: 568 ALEFIKGLAVEPGPAV-WGALLGA 590
           A+ F K   +E    V W +++GA
Sbjct: 368 AILFRK---IENKSVVSWNSMIGA 388



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 45/176 (25%), Positives = 86/176 (48%), Gaps = 7/176 (3%)

Query: 34  IHGF--QNDLSTVTKLAHRLSDFKATC----YARALFFSIPKPDLFLFNVIIRGFSNNEM 87
           IHGF  +N L   + +A  L      C    Y R  F ++   +   +N ++ G+S NE+
Sbjct: 539 IHGFVLRNGLEMNSFVAVSLLSLYFHCSKPFYGRTYFETMGDKNSVCWNAMLSGYSQNEL 598

Query: 88  PKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGA 147
           P  ++  +  +  +  L PD    + +L A S      +G  +H  A+ +    D FV  
Sbjct: 599 PNEALSLFRQMLSD-GLEPDEIAIASILGACSQLSALGLGKEVHCFALKNSLMEDNFVAC 657

Query: 148 ALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRN 203
           +L+D+Y K  ++  ++++F+++  K+   WN MI+G   +     ++ +F DM R+
Sbjct: 658 SLMDMYAKSGFLGHSQRIFNRLNGKEVASWNVMITGFGVHGQGNKAVELFEDMKRS 713



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/188 (27%), Positives = 90/188 (47%), Gaps = 14/188 (7%)

Query: 408 VAPNPVTVSSILSACAQLGAISLGKWVHE-LVKSRNFESNIYVSTALIDMYAKCGNIVEA 466
           +A     +  +L  C Q   + +G+ + E L  S  F  +  ++T LI MY+ CG  +E+
Sbjct: 103 LAQRKEAMGMLLQKCGQYKNVEIGRKLDEMLCVSSQFSGDFVLNTRLITMYSICGYPLES 162

Query: 467 RELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLH-SGIRPSGVTFLSVLYACS- 524
           R +FD + +K+   WN ++SGY  +    EA+  F E++  +  +P   TF  ++ AC+ 
Sbjct: 163 RLVFDRLLNKNLFQWNALVSGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCLIKACTG 222

Query: 525 ----HAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPG 580
               H G    G  +   +I D  F   A     M+ + G+ G L++A+E    +  E  
Sbjct: 223 KCDIHLGKSVHGMAVKMGLIMDL-FVGNA-----MIALYGKCGFLDEAVELFDKMP-EQN 275

Query: 581 PAVWGALL 588
              W +L+
Sbjct: 276 LISWNSLI 283


>gi|297833632|ref|XP_002884698.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297330538|gb|EFH60957.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 685

 Score =  456 bits (1174), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 242/612 (39%), Positives = 346/612 (56%), Gaps = 1/612 (0%)

Query: 173 DTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEI 232
           +  L+N++I+G + N  F +++ +F   +R  G  L   +   VL A       +LG+++
Sbjct: 75  NIFLYNTLINGFVNNHLFHETLDLFLS-IRKHGLNLHGFTFPLVLKACTRASNRKLGIDL 133

Query: 233 QCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKT 292
             L +K GF+  V  +T L+S YS  G +  A  +F +I    +++  A+ SGYT  GK 
Sbjct: 134 HSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKVFEEIPERSVVTWTALFSGYTTAGKH 193

Query: 293 ESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTAL 352
             ++ LF++++    R +S  IV ++      G L     I     +  +  NS V T L
Sbjct: 194 REAIDLFKKMVEMGVRPDSYFIVQVLSACVHVGDLDSGEWIVKHMEEMEMQKNSFVRTTL 253

Query: 353 STVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNP 412
             +Y++  +ME AR +FD   EK + +W+ MI GY  N   +E I  F +M    + P+ 
Sbjct: 254 VNLYAKCGKMEKARSVFDSMGEKDIVTWSTMIQGYASNSFPKEGIEFFLQMLQENLKPDQ 313

Query: 413 VTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDL 472
            ++   LS+CA LGA+ LG+W   L+    F +N++++ ALIDMYAKCG +    E+F  
Sbjct: 314 FSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKE 373

Query: 473 MSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREG 532
           M  K  V  N  ISG   +GH   +  +F +    GI P G TFL +L  C HAGL+++G
Sbjct: 374 MKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDG 433

Query: 533 DEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACM 592
              F ++   +  K   EHY CMVD+ GRAG L+ A   I  + + P   VWGALL  C 
Sbjct: 434 LRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCR 493

Query: 593 IHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGC 652
           + KDT LA    ++L  L+P N G +V LSNIYS    + +AA VR ++ ++ + K PG 
Sbjct: 494 LVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVSGRWDEAAEVRDMMNRKGMKKIPGY 553

Query: 653 TLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELM 712
           + IE+ GT H F + D+ HP S  IYA LE L  +MR  GF   T     DVE+EEKE +
Sbjct: 554 SWIELEGTVHEFLADDKSHPLSDKIYAKLEDLGNEMRLMGFVPTTEFVFFDVEDEEKERV 613

Query: 713 MKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHH 772
           +  HSEKLA+AFGLI+T+ G  IR++KNLRVC DCH   K ISK+T R IVVRD NRFH 
Sbjct: 614 LGHHSEKLAVAFGLISTDHGQVIRVVKNLRVCGDCHEVMKLISKITRREIVVRDNNRFHC 673

Query: 773 FKGGVCSCGDYW 784
           F  G CSC DYW
Sbjct: 674 FTNGSCSCNDYW 685



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 124/476 (26%), Positives = 227/476 (47%), Gaps = 4/476 (0%)

Query: 14  SLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLF 73
           +L+  A T + L Q H  +I H   +D   V  L  R   F+ T Y+  LF     P++F
Sbjct: 18  TLISVASTFNHLKQVHVSLIHHHLHHDTFLVNLLLKRTLFFRQTHYSFLLFSHTQFPNIF 77

Query: 74  LFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGH 133
           L+N +I GF NN +   ++  +  +RK+  L    FT+  VL A +   +R +G+ LH  
Sbjct: 78  LYNTLINGFVNNHLFHETLDLFLSIRKH-GLNLHGFTFPLVLKACTRASNRKLGIDLHSL 136

Query: 134 AIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDS 193
            +  G+  D+    +L+ +Y     +  A KVF+++PE+  V W ++ SG       +++
Sbjct: 137 VVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKVFEEIPERSVVTWTALFSGYTTAGKHREA 196

Query: 194 IWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVS 253
           I +F  MV   G   DS  +  VL A   V +L  G  I     ++    + +V T LV+
Sbjct: 197 IDLFKKMVEM-GVRPDSYFIVQVLSACVHVGDLDSGEWIVKHMEEMEMQKNSFVRTTLVN 255

Query: 254 FYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSST 313
            Y+KCG++E+A  +F  +   D+++ + MI GY  N   +  +  F Q+L    + +  +
Sbjct: 256 LYAKCGKMEKARSVFDSMGEKDIVTWSTMIQGYASNSFPKEGIEFFLQMLQENLKPDQFS 315

Query: 314 IVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESS 373
           IVG +      G L L     S   +   ++N  +  AL  +Y++   M    ++F E  
Sbjct: 316 IVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMK 375

Query: 374 EKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLG-K 432
           EK +   NA I+G  +NG  + + ++F + +   ++P+  T   +L  C   G I  G +
Sbjct: 376 EKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLR 435

Query: 433 WVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELF-DLMSHKSEVTWNTMISG 487
           + + +      +  +     ++D++ + G + +A  L  D+    + + W  ++SG
Sbjct: 436 FFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSG 491



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 58/221 (26%), Positives = 106/221 (47%), Gaps = 2/221 (0%)

Query: 368 LFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGA 427
           LF  +   ++  +N +I G+  N L  E + LF  ++   +  +  T   +L AC +   
Sbjct: 67  LFSHTQFPNIFLYNTLINGFVNNHLFHETLDLFLSIRKHGLNLHGFTFPLVLKACTRASN 126

Query: 428 ISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISG 487
             LG  +H LV    F  ++   T+L+ +Y+  G + +A ++F+ +  +S VTW  + SG
Sbjct: 127 RKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKVFEEIPERSVVTWTALFSG 186

Query: 488 YGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKP 547
           Y   G   EA+ LF +M+  G+RP     + VL AC H G +  G+ I + M  +   + 
Sbjct: 187 YTTAGKHREAIDLFKKMVEMGVRPDSYFIVQVLSACVHVGDLDSGEWIVKHM-EEMEMQK 245

Query: 548 LAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALL 588
            +     +V++  + G++EKA      +  E     W  ++
Sbjct: 246 NSFVRTTLVNLYAKCGKMEKARSVFDSMG-EKDIVTWSTMI 285


>gi|356502930|ref|XP_003520267.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Glycine max]
          Length = 780

 Score =  456 bits (1174), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 248/690 (35%), Positives = 386/690 (55%), Gaps = 35/690 (5%)

Query: 130 LHGHAIVSGYGSDLFVGAALVDLYF--KFSWVKSARKVFDKMPEKDTVLWNSMISGLMKN 187
           +H H + +    D +  + L+  Y     S +  A+ VF+++P+ +   WN++I G   +
Sbjct: 91  IHAHMLRTSRFCDPYTASKLLTAYAISSCSCLIYAKNVFNQIPQPNLYCWNTLIRGYASS 150

Query: 188 CCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYV 247
                S  +F  M+ +   + +  +   +  A + ++ L LG  +  + +K      +++
Sbjct: 151 SDPTQSFLIFLHMLHSCSEFPNKFTFPFLFKAASRLKVLHLGSVLHGMVIKASLSSDLFI 210

Query: 248 LTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAE 307
           L  L++FY   G  + A  +F ++   D++S NAMI+ +   G  + +L LF+++     
Sbjct: 211 LNSLINFYGSSGAPDLAHRVFTNMPGKDVVSWNAMINAFALGGLPDKALLLFQEMEMKDV 270

Query: 308 RVNSSTIVGLI-----PVFYPFG--------------HLHLTNCIHSFCLKSGIVSNSSV 348
           + N  T+V ++      +   FG              HL L N +    +K G ++++  
Sbjct: 271 KPNVITMVSVLSACAKKIDLEFGRWICSYIENNGFTEHLILNNAMLDMYVKCGCINDAKD 330

Query: 349 L------------TALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEA 396
           L            T +   +++L   + A  +FD    K  A+WNA+I+ Y QNG    A
Sbjct: 331 LFNKMSEKDIVSWTTMLDGHAKLGNYDEAHCIFDAMPHKWTAAWNALISAYEQNGKPRVA 390

Query: 397 ISLFQEMQASKVA-PNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALID 455
           +SLF EMQ SK A P+ VT+   L A AQLGAI  G W+H  +K  +   N +++T+L+D
Sbjct: 391 LSLFHEMQLSKDAKPDEVTLICALCASAQLGAIDFGHWIHVYIKKHDINLNCHLATSLLD 450

Query: 456 MYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVT 515
           MYAKCGN+ +A E+F  +  K    W+ MI    ++G G  AL LFS ML + I+P+ VT
Sbjct: 451 MYAKCGNLNKAMEVFHAVERKDVYVWSAMIGALAMYGQGKAALDLFSSMLEAYIKPNAVT 510

Query: 516 FLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGL 575
           F ++L AC+HAGLV EG+++F+ M   +G  P  +HY C+VDI GRAG LEKA  FI+ +
Sbjct: 511 FTNILCACNHAGLVNEGEQLFEQMEPLYGIVPQIQHYVCVVDIFGRAGLLEKAASFIEKM 570

Query: 576 AVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAA 635
            + P  AVWGALLGAC  H +  LA +A + L EL+P N G  VLLSNIY+   D+ + +
Sbjct: 571 PIPPTAAVWGALLGACSRHGNVELAELAYQNLLELEPCNHGAFVLLSNIYAKAGDWEKVS 630

Query: 636 TVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQT 695
            +R++++   + K P C+ I+V G  H F  GD  HP S  IY+ L++++ K +  G++ 
Sbjct: 631 NLRKLMRDSDVKKEPWCSSIDVNGIVHEFLVGDNSHPFSQKIYSKLDEISEKFKPIGYKP 690

Query: 696 ETVTALHDVEEEE-KELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFI 754
           +    L   EE+   E  + VHSEKLAIAFGLI+T     IRI+KN+R+C DCH   K +
Sbjct: 691 DMSNLLQLSEEDNLMEQSLNVHSEKLAIAFGLISTASSQPIRIVKNIRICGDCHAFAKLV 750

Query: 755 SKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           S++  R I++RD  RFHHF+GG CSC DYW
Sbjct: 751 SQLYDRDILLRDRYRFHHFRGGKCSCLDYW 780



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 133/523 (25%), Positives = 236/523 (45%), Gaps = 38/523 (7%)

Query: 7   QSRNLFLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKL--AHRLSDFKATCYARALF 64
           +S N+ L  +       QL Q HA ++      D  T +KL  A+ +S      YA+ +F
Sbjct: 71  ESTNI-LEFIDQCTNTMQLKQIHAHMLRTSRFCDPYTASKLLTAYAISSCSCLIYAKNVF 129

Query: 65  FSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDR 124
             IP+P+L+ +N +IRG++++  P  S   + H+  + +  P+ FT+ F+  AAS     
Sbjct: 130 NQIPQPNLYCWNTLIRGYASSSDPTQSFLIFLHMLHSCSEFPNKFTFPFLFKAASRLKVL 189

Query: 125 SIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGL 184
            +G +LHG  I +   SDLF+  +L++ Y        A +VF  MP KD V WN+MI+  
Sbjct: 190 HLGSVLHGMVIKASLSSDLFILNSLINFYGSSGAPDLAHRVFTNMPGKDVVSWNAMINAF 249

Query: 185 MKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDH 244
                   ++ +F +M        +  ++ +VL A A+  +L  G  I       GF +H
Sbjct: 250 ALGGLPDKALLLFQEM-EMKDVKPNVITMVSVLSACAKKIDLEFGRWICSYIENNGFTEH 308

Query: 245 VYVLTGLVSFYSKCGEVERAELLFRDIVRPDLIS------------------C------- 279
           + +   ++  Y KCG +  A+ LF  +   D++S                  C       
Sbjct: 309 LILNNAMLDMYVKCGCINDAKDLFNKMSEKDIVSWTTMLDGHAKLGNYDEAHCIFDAMPH 368

Query: 280 ------NAMISGYTCNGKTESSLRLFRQL-LASAERVNSSTIVGLIPVFYPFGHLHLTNC 332
                 NA+IS Y  NGK   +L LF ++ L+   + +  T++  +      G +   + 
Sbjct: 369 KWTAAWNALISAYEQNGKPRVALSLFHEMQLSKDAKPDEVTLICALCASAQLGAIDFGHW 428

Query: 333 IHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGL 392
           IH +  K  I  N  + T+L  +Y++   +  A ++F     K +  W+AMI      G 
Sbjct: 429 IHVYIKKHDINLNCHLATSLLDMYAKCGNLNKAMEVFHAVERKDVYVWSAMIGALAMYGQ 488

Query: 393 TEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKS-RNFESNIYVST 451
            + A+ LF  M  + + PN VT ++IL AC   G ++ G+ + E ++        I    
Sbjct: 489 GKAALDLFSSMLEAYIKPNAVTFTNILCACNHAGLVNEGEQLFEQMEPLYGIVPQIQHYV 548

Query: 452 ALIDMYAKCGNIVEARELFDLMS-HKSEVTWNTMISGYGLHGH 493
            ++D++ + G + +A    + M    +   W  ++     HG+
Sbjct: 549 CVVDIFGRAGLLEKAASFIEKMPIPPTAAVWGALLGACSRHGN 591



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 122/572 (21%), Positives = 234/572 (40%), Gaps = 82/572 (14%)

Query: 20  KTQSQLTQTHAQIIIHG------FQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLF 73
           K  S+L   H   ++HG        +DL  +  L +      A   A  +F ++P  D+ 
Sbjct: 181 KAASRLKVLHLGSVLHGMVIKASLSSDLFILNSLINFYGSSGAPDLAHRVFTNMPGKDVV 240

Query: 74  LFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGH 133
            +N +I  F+   +P  ++  +  +     + P+  T   VLSA +   D   G  +  +
Sbjct: 241 SWNAMINAFALGGLPDKALLLFQEMEMKD-VKPNVITMVSVLSACAKKIDLEFGRWICSY 299

Query: 134 AIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMK------- 186
              +G+   L +  A++D+Y K   +  A+ +F+KM EKD V W +M+ G  K       
Sbjct: 300 IENNGFTEHLILNNAMLDMYVKCGCINDAKDLFNKMSEKDIVSWTTMLDGHAKLGNYDEA 359

Query: 187 NCCFQ------DSIW------------------VFGDMVRNGGTWLDSTSVAAVLPAVAE 222
           +C F        + W                  +F +M  +     D  ++   L A A+
Sbjct: 360 HCIFDAMPHKWTAAWNALISAYEQNGKPRVALSLFHEMQLSKDAKPDEVTLICALCASAQ 419

Query: 223 VQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAM 282
           +  +  G  I     K   + + ++ T L+  Y+KCG + +A  +F  + R D+   +AM
Sbjct: 420 LGAIDFGHWIHVYIKKHDINLNCHLATSLLDMYAKCGNLNKAMEVFHAVERKDVYVWSAM 479

Query: 283 ISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGI 342
           I      G+ +++L LF  +L +  + N+ T   +           L  C H     +G+
Sbjct: 480 IGALAMYGQGKAALDLFSSMLEAYIKPNAVTFTNI-----------LCACNH-----AGL 523

Query: 343 VSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQE 402
           V+    L           +ME    +  +     +  +  ++  + + GL E+A S  ++
Sbjct: 524 VNEGEQL---------FEQMEPLYGIVPQ-----IQHYVCVVDIFGRAGLLEKAASFIEK 569

Query: 403 MQASKVAPNPVTVSSILSACAQLGAISLGKWVHE-LVKSRNFESNIYVSTALIDMYAKCG 461
           M    + P      ++L AC++ G + L +  ++ L++        +V   L ++YAK G
Sbjct: 570 M---PIPPTAAVWGALLGACSRHGNVELAELAYQNLLELEPCNHGAFV--LLSNIYAKAG 624

Query: 462 NIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEAL-----QLFSEMLHSGIRPSGVTF 516
           +  +   L  LM   S+V      S   ++G   E L       FS+ ++S +      F
Sbjct: 625 DWEKVSNLRKLM-RDSDVKKEPWCSSIDVNGIVHEFLVGDNSHPFSQKIYSKLDEISEKF 683

Query: 517 LSVLYACSHAGLVR--EGDEIFQSMIHDHGFK 546
             + Y    + L++  E D + +  ++ H  K
Sbjct: 684 KPIGYKPDMSNLLQLSEEDNLMEQSLNVHSEK 715


>gi|359480846|ref|XP_002280702.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Vitis vinifera]
          Length = 785

 Score =  456 bits (1174), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 256/698 (36%), Positives = 392/698 (56%), Gaps = 67/698 (9%)

Query: 153 YFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTS 212
           Y K   ++ A +VF++MPE D+V W +MI G  +   F+++I +F +MV +       T 
Sbjct: 89  YAKGGRLEEAHRVFEEMPEPDSVSWTAMIVGYNQMGQFENAIGMFREMVSDDVPPTQFT- 147

Query: 213 VAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGE------------ 260
           +  VL + A V+ L +G ++    +K G   ++ V   L++ Y+K G+            
Sbjct: 148 LTNVLASCAAVECLGIGRKVHSFVVKHGLSSYISVANSLLNMYAKSGDPVTAKIVFDRMK 207

Query: 261 -------------------VERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLF-R 300
                              V+ A++ F  ++  D++S NAMISGY  +G    +L +F +
Sbjct: 208 LKSTSSWNTMISSHMQSGLVDLAQVQFEQMIERDVVSWNAMISGYNQHGFDREALDIFSK 267

Query: 301 QLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCL-------------------KSG 341
            L+ S+ + +  T+   +       +L L   IH+  +                   KSG
Sbjct: 268 MLMDSSSKPDKFTLASALSACANLENLKLGKQIHAHIIRTEFDTFGAVGNALISMYSKSG 327

Query: 342 ------------IVSNSSVL--TALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGY 387
                       ++SN  V+  TAL   Y +L ++  AR++FD    + + +W AMI GY
Sbjct: 328 GVEIAQKIIEQSMISNLDVIAFTALLDGYVKLGDINPARRIFDSLRVRDVVAWTAMIVGY 387

Query: 388 TQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNI 447
            QNG  ++A+ LF+ M      PN  T++++LS  + L ++  G+ +H         S++
Sbjct: 388 VQNGFNQDAMELFRSMIKEGPKPNNYTLATMLSVSSSLASLDHGRQIHASATRSGNASSV 447

Query: 448 YVSTALIDMYAKCGNIVEARELFDLMSHKSE-VTWNTMISGYGLHGHGLEALQLFSEMLH 506
            VS ALI MYAK G+I +AR +F+L+  K + +TW +MI     HG G EAL LF  ML 
Sbjct: 448 SVSNALITMYAKSGSINDARWVFNLIHWKRDTITWTSMIIALAQHGLGEEALTLFERMLE 507

Query: 507 SGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLE 566
           +GI+P  +T++ VL AC+H GLV +G   +  M + H   P   HYACM+D+ GRAG L+
Sbjct: 508 NGIKPDHITYVGVLSACTHVGLVEQGRSYYNLMQNAHKIIPTPSHYACMIDLFGRAGLLQ 567

Query: 567 KALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYS 626
           +A  FI+ + +EP    WG+LL +C +HK+  LA VA+E+L  ++PEN G +  L+N+YS
Sbjct: 568 EAHAFIENMPIEPDVIAWGSLLASCKVHKNVELAEVAAERLLLIEPENSGAYSALANVYS 627

Query: 627 AERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNG 686
           A   +  AA +R+ +K + + K  G + +++    H+F   D LHPQ  AIY M+ K+  
Sbjct: 628 ACGQWENAANIRKSMKDKGVKKDQGFSWVQIKNKVHIFGVDDGLHPQRDAIYEMMAKIWK 687

Query: 687 KMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLD 746
           ++++ GF  +T + LHD+EEE KE ++  HSEKLAIAFGLI T   T +RI+KNLRVC D
Sbjct: 688 EIKKMGFVPDTESVLHDLEEELKEQILSHHSEKLAIAFGLICTPENTTLRIMKNLRVCND 747

Query: 747 CHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           CH+A KFISK+ GR I+VRDA RFHHFK G+CSC DYW
Sbjct: 748 CHSAIKFISKLVGREIIVRDATRFHHFKNGLCSCRDYW 785



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 121/501 (24%), Positives = 229/501 (45%), Gaps = 72/501 (14%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           A  +F  +P+PD   +  +I G++     +++I  +  +  +  + P  FT + VL++ +
Sbjct: 98  AHRVFEEMPEPDSVSWTAMIVGYNQMGQFENAIGMFREMVSDD-VPPTQFTLTNVLASCA 156

Query: 120 ACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMP--------- 170
           A     IG  +H   +  G  S + V  +L+++Y K     +A+ VFD+M          
Sbjct: 157 AVECLGIGRKVHSFVVKHGLSSYISVANSLLNMYAKSGDPVTAKIVFDRMKLKSTSSWNT 216

Query: 171 ----------------------EKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWL 208
                                 E+D V WN+MISG  ++   ++++ +F  M+ +  +  
Sbjct: 217 MISSHMQSGLVDLAQVQFEQMIERDVVSWNAMISGYNQHGFDREALDIFSKMLMDSSSKP 276

Query: 209 DSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAE--- 265
           D  ++A+ L A A ++ L+LG +I    ++  F     V   L+S YSK G VE A+   
Sbjct: 277 DKFTLASALSACANLENLKLGKQIHAHIIRTEFDTFGAVGNALISMYSKSGGVEIAQKII 336

Query: 266 ------------------------------LLFRDIVRPDLISCNAMISGYTCNGKTESS 295
                                          +F  +   D+++  AMI GY  NG  + +
Sbjct: 337 EQSMISNLDVIAFTALLDGYVKLGDINPARRIFDSLRVRDVVAWTAMIVGYVQNGFNQDA 396

Query: 296 LRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTV 355
           + LFR ++    + N+ T+  ++ V      L     IH+   +SG  S+ SV  AL T+
Sbjct: 397 MELFRSMIKEGPKPNNYTLATMLSVSSSLASLDHGRQIHASATRSGNASSVSVSNALITM 456

Query: 356 YSRLNEMEAARKLFDESS-EKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVT 414
           Y++   +  AR +F+    ++   +W +MI    Q+GL EEA++LF+ M  + + P+ +T
Sbjct: 457 YAKSGSINDARWVFNLIHWKRDTITWTSMIIALAQHGLGEEALTLFERMLENGIKPDHIT 516

Query: 415 VSSILSACAQLGAISLGKWVHELVKSRNFESNIYVST---ALIDMYAKCGNIVEARELFD 471
              +LSAC  +G +  G+  + L++  N    I   +    +ID++ + G + EA    +
Sbjct: 517 YVGVLSACTHVGLVEQGRSYYNLMQ--NAHKIIPTPSHYACMIDLFGRAGLLQEAHAFIE 574

Query: 472 LMSHKSEV-TWNTMISGYGLH 491
            M  + +V  W ++++   +H
Sbjct: 575 NMPIEPDVIAWGSLLASCKVH 595



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 110/445 (24%), Positives = 194/445 (43%), Gaps = 68/445 (15%)

Query: 245 VYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLA 304
           V+    ++S Y+K G +E A  +F ++  PD +S  AMI GY   G+ E+++ +FR++++
Sbjct: 79  VFSWNIILSGYAKGGRLEEAHRVFEEMPEPDSVSWTAMIVGYNQMGQFENAIGMFREMVS 138

Query: 305 SAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEA 364
                   T+  ++        L +   +HSF +K G+ S  SV  +L  +Y++  +   
Sbjct: 139 DDVPPTQFTLTNVLASCAAVECLGIGRKVHSFVVKHGLSSYISVANSLLNMYAKSGDPVT 198

Query: 365 ARKLFDESSEKSLASW-------------------------------NAMIAGYTQNGLT 393
           A+ +FD    KS +SW                               NAMI+GY Q+G  
Sbjct: 199 AKIVFDRMKLKSTSSWNTMISSHMQSGLVDLAQVQFEQMIERDVVSWNAMISGYNQHGFD 258

Query: 394 EEAISLFQEM-QASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFES------- 445
            EA+ +F +M   S   P+  T++S LSACA L  + LGK +H  +    F++       
Sbjct: 259 REALDIFSKMLMDSSSKPDKFTLASALSACANLENLKLGKQIHAHIIRTEFDTFGAVGNA 318

Query: 446 --------------------------NIYVSTALIDMYAKCGNIVEARELFDLMSHKSEV 479
                                     ++   TAL+D Y K G+I  AR +FD +  +  V
Sbjct: 319 LISMYSKSGGVEIAQKIIEQSMISNLDVIAFTALLDGYVKLGDINPARRIFDSLRVRDVV 378

Query: 480 TWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSM 539
            W  MI GY  +G   +A++LF  M+  G +P+  T  ++L   S    +  G +I  S 
Sbjct: 379 AWTAMIVGYVQNGFNQDAMELFRSMIKEGPKPNNYTLATMLSVSSSLASLDHGRQIHASA 438

Query: 540 IHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNL 599
                   ++   A ++ +  ++G +  A      +  +     W +++ A   H     
Sbjct: 439 TRSGNASSVSVSNA-LITMYAKSGSINDARWVFNLIHWKRDTITWTSMIIALAQHGLGEE 497

Query: 600 ARVASEKLFE--LDPENVGYHVLLS 622
           A    E++ E  + P+++ Y  +LS
Sbjct: 498 ALTLFERMLENGIKPDHITYVGVLS 522



 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 90/333 (27%), Positives = 148/333 (44%), Gaps = 65/333 (19%)

Query: 333 IHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGL 392
           IH+  +K+G+     ++  L   Y++   +  A ++FDE   KS+ SWN +++GY + G 
Sbjct: 35  IHARIIKAGLHLGVFLMNNLMNFYAKTGFIYDAHRVFDEMPVKSVFSWNIILSGYAKGGR 94

Query: 393 TEE-------------------------------AISLFQEMQASKVAPNPVTVSSILSA 421
            EE                               AI +F+EM +  V P   T++++L++
Sbjct: 95  LEEAHRVFEEMPEPDSVSWTAMIVGYNQMGQFENAIGMFREMVSDDVPPTQFTLTNVLAS 154

Query: 422 CAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSE--- 478
           CA +  + +G+ VH  V      S I V+ +L++MYAK G+ V A+ +FD M  KS    
Sbjct: 155 CAAVECLGIGRKVHSFVVKHGLSSYISVANSLLNMYAKSGDPVTAKIVFDRMKLKSTSSW 214

Query: 479 ----------------------------VTWNTMISGYGLHGHGLEALQLFSEML-HSGI 509
                                       V+WN MISGY  HG   EAL +FS+ML  S  
Sbjct: 215 NTMISSHMQSGLVDLAQVQFEQMIERDVVSWNAMISGYNQHGFDREALDIFSKMLMDSSS 274

Query: 510 RPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKAL 569
           +P   T  S L AC++   ++ G +I   +I    F         ++ +  ++G +E A 
Sbjct: 275 KPDKFTLASALSACANLENLKLGKQIHAHIIRTE-FDTFGAVGNALISMYSKSGGVEIAQ 333

Query: 570 EFIKGLAVEPGPAV-WGALLGACMIHKDTNLAR 601
           + I+   +     + + ALL   +   D N AR
Sbjct: 334 KIIEQSMISNLDVIAFTALLDGYVKLGDINPAR 366



 Score =  102 bits (254), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 103/454 (22%), Positives = 194/454 (42%), Gaps = 75/454 (16%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           A+  F  + + D+  +N +I G++ +   + ++  ++ +  +++  PD FT +  LSA +
Sbjct: 230 AQVQFEQMIERDVVSWNAMISGYNQHGFDREALDIFSKMLMDSSSKPDKFTLASALSACA 289

Query: 120 ACCDRSIGVLLHGHAIVSGYGSDLFVGAALV----------------------------- 150
              +  +G  +H H I + + +   VG AL+                             
Sbjct: 290 NLENLKLGKQIHAHIIRTEFDTFGAVGNALISMYSKSGGVEIAQKIIEQSMISNLDVIAF 349

Query: 151 ----DLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGT 206
               D Y K   +  AR++FD +  +D V W +MI G ++N   QD++ +F  M++ G  
Sbjct: 350 TALLDGYVKLGDINPARRIFDSLRVRDVVAWTAMIVGYVQNGFNQDAMELFRSMIKEGPK 409

Query: 207 WLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAEL 266
             ++ ++A +L   + +  L  G +I     + G    V V   L++ Y+K G +  A  
Sbjct: 410 -PNNYTLATMLSVSSSLASLDHGRQIHASATRSGNASSVSVSNALITMYAKSGSINDARW 468

Query: 267 LFRDI-VRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFG 325
           +F  I  + D I+  +MI     +G  E +L LF ++L +  + +  T VG+        
Sbjct: 469 VFNLIHWKRDTITWTSMIIALAQHGLGEEALTLFERMLENGIKPDHITYVGV-------- 520

Query: 326 HLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIA 385
              L+ C H   ++ G               S  N M+ A K+    S      +  MI 
Sbjct: 521 ---LSACTHVGLVEQG--------------RSYYNLMQNAHKIIPTPSH-----YACMID 558

Query: 386 GYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHE---LVKSRN 442
            + + GL +EA +  + M    + P+ +   S+L++C     + L +   E   L++  N
Sbjct: 559 LFGRAGLLQEAHAFIENM---PIEPDVIAWGSLLASCKVHKNVELAEVAAERLLLIEPEN 615

Query: 443 FESNIYVSTALIDMYAKCGNIVEARELFDLMSHK 476
             S  Y  +AL ++Y+ CG    A  +   M  K
Sbjct: 616 --SGAY--SALANVYSACGQWENAANIRKSMKDK 645



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 37/142 (26%), Positives = 66/142 (46%), Gaps = 5/142 (3%)

Query: 402 EMQASKVAPNPVT-VSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKC 460
           E  +S++  +P    +S L    +      GK +H  +        +++   L++ YAK 
Sbjct: 2   ETSSSQILTSPSDPYTSFLQRSLKFKDPFTGKSIHARIIKAGLHLGVFLMNNLMNFYAKT 61

Query: 461 GNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVL 520
           G I +A  +FD M  KS  +WN ++SGY   G   EA ++F EM      P  V++ +++
Sbjct: 62  GFIYDAHRVFDEMPVKSVFSWNIILSGYAKGGRLEEAHRVFEEMP----EPDSVSWTAMI 117

Query: 521 YACSHAGLVREGDEIFQSMIHD 542
              +  G       +F+ M+ D
Sbjct: 118 VGYNQMGQFENAIGMFREMVSD 139


>gi|347954534|gb|AEP33767.1| organelle transcript processing 82, partial [Matthiola incana]
          Length = 694

 Score =  456 bits (1174), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 259/660 (39%), Positives = 384/660 (58%), Gaps = 38/660 (5%)

Query: 156 FSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAA 215
           F     A  VFD + E + ++WN+M  G   +     ++ ++  M+ + G   DS +   
Sbjct: 36  FDGFPYAISVFDTIQEPNLLIWNTMFRGHALSSDPVSALKLYLVMI-SLGLLPDSYTFPF 94

Query: 216 VLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGE--------------- 260
           +L + A+ +  + G +I    LKLGF   +YV T L+S Y++ G                
Sbjct: 95  LLKSCAKSKIRKEGQQIHGHVLKLGFDLDIYVHTSLISMYAQNGRLEDARKVFDISSHRD 154

Query: 261 ----------------VERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLA 304
                           +E A+ LF +I   D++S NAMISGY   G  + +L LF++++ 
Sbjct: 155 VVSYTALIAGYVSRGYIESAQKLFDEIPGKDVVSWNAMISGYVETGNYKEALELFKEMMM 214

Query: 305 SAE-RVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEME 363
               R + ST+V ++        + L   +HS+    G  SN  ++ AL  +YS+  E+E
Sbjct: 215 MTNVRPDESTMVTVVSACAQSDSIELGRHVHSWINDHGFASNLKIVNALIDLYSKFGEVE 274

Query: 364 AARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACA 423
            A +LFD    K + SWN +I GYT   L +EA+ LFQEM  S   PN VT+ SIL ACA
Sbjct: 275 TACELFDGLWNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACA 334

Query: 424 QLGAISLGKWVHELV--KSRNFESNIY-VSTALIDMYAKCGNIVEARELFDL-MSHKSEV 479
            LGAI +G+W+H  +  K +   +N+  + T+LIDMYAKCG+I  A+++FD  MS++S  
Sbjct: 335 HLGAIDIGRWIHVYINKKLKGVVTNVSSLQTSLIDMYAKCGDIDAAQQVFDSSMSNRSLS 394

Query: 480 TWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSM 539
           TWN MISG+ +HG    A  +FS M  +GI P  +TF+ +L ACSH+G++  G  IF+SM
Sbjct: 395 TWNAMISGFAMHGRANAAFDIFSRMRMNGIEPDDITFVGLLSACSHSGMLDLGRNIFRSM 454

Query: 540 IHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNL 599
              +   P  EHY CM+D+LG +G  ++A E I  + +EP   +W +LL AC IH +  L
Sbjct: 455 TRGYEITPKLEHYGCMIDLLGHSGLFKEAEEMINTMPMEPDGVIWCSLLKACKIHGNLEL 514

Query: 600 ARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKL-AKAPGCTLIEVG 658
               ++KL +++P N G +VLLSNIY+A   + + A +R ++  + +  K PGC+ IE+ 
Sbjct: 515 GESFAKKLIKIEPGNSGSYVLLSNIYAAAGRWNEVAKIRALLNDKGMKKKVPGCSSIEID 574

Query: 659 GTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSE 718
              H F  GD+LHPQ+  IY MLE++   + EAGF  +T   L ++EEE +E  ++ HSE
Sbjct: 575 SVVHEFIIGDKLHPQNREIYGMLEEMEVLLEEAGFVPDTSEVLQEMEEEWREGALRHHSE 634

Query: 719 KLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVC 778
           KLAIAFGLI+T+PGT++ I+KNLRVC +CH ATK ISK+  R I+ RD  RF HF+ GVC
Sbjct: 635 KLAIAFGLISTKPGTKLTIMKNLRVCKNCHEATKLISKIYKREIIARDRTRFXHFRDGVC 694



 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 160/567 (28%), Positives = 291/567 (51%), Gaps = 49/567 (8%)

Query: 23  SQLTQTHAQIIIHGFQNDLSTVTKLAHRL---SDFKATCYARALFFSIPKPDLFLFNVII 79
           S +   HAQ+I  G  N    ++KL         F    YA ++F +I +P+L ++N + 
Sbjct: 2   SSVRXIHAQMIKTGLHNTNYALSKLLEFCVVSPHFDGFPYAISVFDTIQEPNLLIWNTMF 61

Query: 80  RGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGY 139
           RG + +  P S++  Y  +  +  L PD++T+ F+L + +    R  G  +HGH +  G+
Sbjct: 62  RGHALSSDPVSALKLYL-VMISLGLLPDSYTFPFLLKSCAKSKIRKEGQQIHGHVLKLGF 120

Query: 140 GSDLFVGAALVDLY------------FKFS-------------------WVKSARKVFDK 168
             D++V  +L+ +Y            F  S                   +++SA+K+FD+
Sbjct: 121 DLDIYVHTSLISMYAQNGRLEDARKVFDISSHRDVVSYTALIAGYVSRGYIESAQKLFDE 180

Query: 169 MPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRL 228
           +P KD V WN+MISG ++   +++++ +F +M+       D +++  V+ A A+   + L
Sbjct: 181 IPGKDVVSWNAMISGYVETGNYKEALELFKEMMMMTNVRPDESTMVTVVSACAQSDSIEL 240

Query: 229 GMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTC 288
           G  +       GF  ++ ++  L+  YSK GEVE A  LF  +   D+IS N +I GYT 
Sbjct: 241 GRHVHSWINDHGFASNLKIVNALIDLYSKFGEVETACELFDGLWNKDVISWNTLIGGYTH 300

Query: 289 NGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLK--SGIVSN- 345
               + +L LF+++L S E  N  T++ ++P     G + +   IH +  K   G+V+N 
Sbjct: 301 MNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYINKKLKGVVTNV 360

Query: 346 SSVLTALSTVYSRLNEMEAARKLFDES-SEKSLASWNAMIAGYTQNGLTEEAISLFQEMQ 404
           SS+ T+L  +Y++  +++AA+++FD S S +SL++WNAMI+G+  +G    A  +F  M+
Sbjct: 361 SSLQTSLIDMYAKCGDIDAAQQVFDSSMSNRSLSTWNAMISGFAMHGRANAAFDIFSRMR 420

Query: 405 ASKVAPNPVTVSSILSACAQLGAISLGKWV-HELVKSRNFESNIYVSTALIDMYAKCGNI 463
            + + P+ +T   +LSAC+  G + LG+ +   + +       +     +ID+    G  
Sbjct: 421 MNGIEPDDITFVGLLSACSHSGMLDLGRNIFRSMTRGYEITPKLEHYGCMIDLLGHSGLF 480

Query: 464 VEARELFDLMSHKSE-VTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSG---VTFLSV 519
            EA E+ + M  + + V W +++    +HG+ LE  + F++ L   I P        LS 
Sbjct: 481 KEAEEMINTMPMEPDGVIWCSLLKACKIHGN-LELGESFAKKLIK-IEPGNSGSYVLLSN 538

Query: 520 LYACSHAGLVREGDEIFQSMIHDHGFK 546
           +YA   AG   E  +I +++++D G K
Sbjct: 539 IYAA--AGRWNEVAKI-RALLNDKGMK 562



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 84/293 (28%), Positives = 137/293 (46%), Gaps = 37/293 (12%)

Query: 333 IHSFCLKSGIVSNSSVLTAL---STVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQ 389
           IH+  +K+G+ + +  L+ L     V    +    A  +FD   E +L  WN M  G+  
Sbjct: 7   IHAQMIKTGLHNTNYALSKLLEFCVVSPHFDGFPYAISVFDTIQEPNLLIWNTMFRGHAL 66

Query: 390 NGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYV 449
           +     A+ L+  M +  + P+  T   +L +CA+      G+ +H  V    F+ +IYV
Sbjct: 67  SSDPVSALKLYLVMISLGLLPDSYTFPFLLKSCAKSKIRKEGQQIHGHVLKLGFDLDIYV 126

Query: 450 STALIDMYAKCGNIVEARELFDLMSH-------------------------------KSE 478
            T+LI MYA+ G + +AR++FD+ SH                               K  
Sbjct: 127 HTSLISMYAQNGRLEDARKVFDISSHRDVVSYTALIAGYVSRGYIESAQKLFDEIPGKDV 186

Query: 479 VTWNTMISGYGLHGHGLEALQLFSE-MLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQ 537
           V+WN MISGY   G+  EAL+LF E M+ + +RP   T ++V+ AC+ +  +  G  +  
Sbjct: 187 VSWNAMISGYVETGNYKEALELFKEMMMMTNVRPDESTMVTVVSACAQSDSIELGRHV-H 245

Query: 538 SMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGA 590
           S I+DHGF    +    ++D+  + G++E A E   GL        W  L+G 
Sbjct: 246 SWINDHGFASNLKIVNALIDLYSKFGEVETACELFDGLW-NKDVISWNTLIGG 297


>gi|356502788|ref|XP_003520198.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g63370-like [Glycine max]
          Length = 923

 Score =  456 bits (1173), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 246/728 (33%), Positives = 401/728 (55%), Gaps = 6/728 (0%)

Query: 60  ARALFFSI--PKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSA 117
           AR LF  I   K D   +N II           ++  +  +++   +  + +T+   L  
Sbjct: 199 ARVLFDGIMMEKEDTVSWNSIISAHVAEGNCLEALSLFRRMQE-VGVASNTYTFVAALQG 257

Query: 118 ASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLW 177
                   +G+ +HG  + S + +D++V  AL+ +Y K   ++ A +VF+ M  +D V W
Sbjct: 258 VEDPSFVKLGMGIHGAVLKSNHFADVYVANALIAMYAKCGRMEDAGRVFESMLCRDYVSW 317

Query: 178 NSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGL 237
           N+++SGL++N  + D++  F DM +N G   D  SV  ++ A      L  G E+    +
Sbjct: 318 NTLLSGLVQNELYSDALNYFRDM-QNSGQKPDQVSVLNLIAASGRSGNLLKGKEVHAYAI 376

Query: 238 KLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLR 297
           + G   ++ +   LV  Y+KC  V+     F  +   DLIS   +I+GY  N     ++ 
Sbjct: 377 RNGLDSNMQIGNTLVDMYAKCCCVKYMGHAFECMHEKDLISWTTIIAGYAQNEFHLEAIN 436

Query: 298 LFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYS 357
           LFR++      V+   I  ++         +    IH +  K  + ++  +  A+  VY 
Sbjct: 437 LFRKVQVKGMDVDPMMIGSVLRACSGLKSRNFIREIHGYVFKRDL-ADIMLQNAIVNVYG 495

Query: 358 RLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSS 417
            +  ++ AR+ F+    K + SW +MI     NGL  EA+ LF  ++ + + P+ + + S
Sbjct: 496 EVGHIDYARRAFESIRSKDIVSWTSMITCCVHNGLPVEALELFYSLKQTNIQPDSIAIIS 555

Query: 418 ILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKS 477
            LSA A L ++  GK +H  +  + F     ++++L+DMYA CG +  +R++F  +  + 
Sbjct: 556 ALSATANLSSLKKGKEIHGFLIRKGFFLEGPIASSLVDMYACCGTVENSRKMFHSVKQRD 615

Query: 478 EVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQ 537
            + W +MI+  G+HG G +A+ LF +M    + P  +TFL++LYACSH+GL+ EG   F+
Sbjct: 616 LILWTSMINANGMHGCGNKAIALFKKMTDQNVIPDHITFLALLYACSHSGLMVEGKRFFE 675

Query: 538 SMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDT 597
            M + +  +P  EHYACMVD+L R+  LE+A  F++ + ++P   +W ALLGAC IH + 
Sbjct: 676 IMKYGYQLEPWPEHYACMVDLLSRSNSLEEAYHFVRNMPIKPSSEIWCALLGACHIHSNK 735

Query: 598 NLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEV 657
            L  +A+++L + D EN G + L+SNI++A+  +     VR  +K   L K PGC+ IEV
Sbjct: 736 ELGELAAKELLQSDTENSGKYALISNIFAADGRWNDVEEVRLRMKGNGLKKNPGCSWIEV 795

Query: 658 GGTPHVFTSGDQLHPQSTAIYAMLEKLNGKM-REAGFQTETVTALHDVEEEEKELMMKVH 716
               H F + D+ HPQ+  IY  L +    + ++ G+  +T    H+V EEEK  M+  H
Sbjct: 796 DNKIHTFMARDKSHPQTDDIYLKLAQFTKLLEKKGGYIAQTKFVFHNVSEEEKTQMLYGH 855

Query: 717 SEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGG 776
           SE+LA+ +GL+ T  GT IRI KNLR+C DCHT  K  S+V+ R +VVRDANRFHHF+ G
Sbjct: 856 SERLALGYGLLVTPKGTCIRITKNLRICDDCHTFFKIASEVSQRPLVVRDANRFHHFERG 915

Query: 777 VCSCGDYW 784
           +CSCGD+W
Sbjct: 916 LCSCGDFW 923



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 167/624 (26%), Positives = 310/624 (49%), Gaps = 15/624 (2%)

Query: 4   KTPQSRNLFLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARAL 63
           +   + +L L L   AK   Q  Q HA ++       L+T  KL        +   A  +
Sbjct: 44  RLEHAHSLLLDLCVAAKALPQGQQLHALLLKSHLSAFLAT--KLVLMYGKCGSLRDAVKV 101

Query: 64  FFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCD 123
           F  + +  +F +N ++  F ++     +I  Y  +R    +  D  T+  VL A  A  +
Sbjct: 102 FDEMSERTIFSWNALMGAFVSSGKYLEAIELYKDMRV-LGVAIDACTFPSVLKACGALGE 160

Query: 124 RSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFD--KMPEKDTVLWNSMI 181
             +G  +HG A+  GYG  +FV  AL+ +Y K   +  AR +FD   M ++DTV WNS+I
Sbjct: 161 SRLGAEIHGVAVKCGYGEFVFVCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSII 220

Query: 182 SGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGF 241
           S  +      +++ +F  M +  G   ++ +  A L  V +   ++LGM I    LK   
Sbjct: 221 SAHVAEGNCLEALSLFRRM-QEVGVASNTYTFVAALQGVEDPSFVKLGMGIHGAVLKSNH 279

Query: 242 HDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQ 301
              VYV   L++ Y+KCG +E A  +F  ++  D +S N ++SG   N     +L  FR 
Sbjct: 280 FADVYVANALIAMYAKCGRMEDAGRVFESMLCRDYVSWNTLLSGLVQNELYSDALNYFRD 339

Query: 302 LLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNE 361
           +  S ++ +  +++ LI      G+L     +H++ +++G+ SN  +   L  +Y++   
Sbjct: 340 MQNSGQKPDQVSVLNLIAASGRSGNLLKGKEVHAYAIRNGLDSNMQIGNTLVDMYAKCCC 399

Query: 362 MEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSA 421
           ++     F+   EK L SW  +IAGY QN    EAI+LF+++Q   +  +P+ + S+L A
Sbjct: 400 VKYMGHAFECMHEKDLISWTTIIAGYAQNEFHLEAINLFRKVQVKGMDVDPMMIGSVLRA 459

Query: 422 CAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTW 481
           C+ L + +  + +H  V  R+  ++I +  A++++Y + G+I  AR  F+ +  K  V+W
Sbjct: 460 CSGLKSRNFIREIHGYVFKRDL-ADIMLQNAIVNVYGEVGHIDYARRAFESIRSKDIVSW 518

Query: 482 NTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIH 541
            +MI+    +G  +EAL+LF  +  + I+P  +  +S L A ++   +++G EI   +I 
Sbjct: 519 TSMITCCVHNGLPVEALELFYSLKQTNIQPDSIAIISALSATANLSSLKKGKEIHGFLIR 578

Query: 542 DHGF--KPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNL 599
              F   P+A   + +VD+    G +E + +    +  +    +W +++ A  +H   N 
Sbjct: 579 KGFFLEGPIA---SSLVDMYACCGTVENSRKMFHSVK-QRDLILWTSMINANGMHGCGNK 634

Query: 600 ARVASEKLFELD--PENVGYHVLL 621
           A    +K+ + +  P+++ +  LL
Sbjct: 635 AIALFKKMTDQNVIPDHITFLALL 658



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 122/447 (27%), Positives = 202/447 (45%), Gaps = 41/447 (9%)

Query: 216 VLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPD 275
           +L      + L  G ++  L LK   H   ++ T LV  Y KCG +  A  +F ++    
Sbjct: 52  LLDLCVAAKALPQGQQLHALLLK--SHLSAFLATKLVLMYGKCGSLRDAVKVFDEMSERT 109

Query: 276 LISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHS 335
           + S NA++  +  +GK   ++ L++ +      +++ T   ++      G   L   IH 
Sbjct: 110 IFSWNALMGAFVSSGKYLEAIELYKDMRVLGVAIDACTFPSVLKACGALGESRLGAEIHG 169

Query: 336 FCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDE--SSEKSLASWNAMIAGYTQNGLT 393
             +K G      V  AL  +Y +  ++  AR LFD     ++   SWN++I+ +   G  
Sbjct: 170 VAVKCGYGEFVFVCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHVAEGNC 229

Query: 394 EEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTAL 453
            EA+SLF+ MQ   VA N  T  + L        + LG  +H  V   N  +++YV+ AL
Sbjct: 230 LEALSLFRRMQEVGVASNTYTFVAALQGVEDPSFVKLGMGIHGAVLKSNHFADVYVANAL 289

Query: 454 IDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSG 513
           I MYAKCG + +A  +F+ M  +  V+WNT++SG   +    +AL  F +M +SG +P  
Sbjct: 290 IAMYAKCGRMEDAGRVFESMLCRDYVSWNTLLSGLVQNELYSDALNYFRDMQNSGQKPDQ 349

Query: 514 VTFLSVLYACSHAGLVREGDEIFQSMIH---DHGFK---PLAEHYA--CMVDILGRA--- 562
           V+ L+++ A   +G + +G E+    I    D   +    L + YA  C V  +G A   
Sbjct: 350 VSVLNLIAASGRSGNLLKGKEVHAYAIRNGLDSNMQIGNTLVDMYAKCCCVKYMGHAFEC 409

Query: 563 ----------------GQLEKALEFI--------KGLAVEPGPAVWGALLGACMIHKDTN 598
                            Q E  LE I        KG+ V+  P + G++L AC   K  N
Sbjct: 410 MHEKDLISWTTIIAGYAQNEFHLEAINLFRKVQVKGMDVD--PMMIGSVLRACSGLKSRN 467

Query: 599 LARVASEKLFELDPENVGYHVLLSNIY 625
             R     +F+ D  ++     + N+Y
Sbjct: 468 FIREIHGYVFKRDLADIMLQNAIVNVY 494


>gi|358347043|ref|XP_003637572.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503507|gb|AES84710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 833

 Score =  456 bits (1173), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 277/822 (33%), Positives = 430/822 (52%), Gaps = 80/822 (9%)

Query: 20  KTQSQLTQTHAQIIIHG-FQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPD---LFLF 75
           KT +Q    H Q II+G   N  + VT L +      +   A  L      P    ++ +
Sbjct: 35  KTLTQAKLLHQQYIINGHLLNSYTNVTNLIYTYISSNSITNAILLLEKNVTPSHSSVYWW 94

Query: 76  NVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAI 135
           N +IR   +   P +++  +  + K    TPD++T+ FV  A     +  +G  +HG  I
Sbjct: 95  NQLIRHALHFNSPNTALRLFRRM-KTLHWTPDHYTFPFVFKACGEISNFELGASIHGCVI 153

Query: 136 VSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEK---DTVLWNSMISGLMKNCCFQD 192
             G+ S++FV  A++ +Y K   V  ARKVFD++  +   D+V WNS++S  + + CF  
Sbjct: 154 RLGFESNVFVCNAVISMYGKCKAVVHARKVFDELCYRGICDSVTWNSIVS--VYSHCFVP 211

Query: 193 SIWV--FGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTG 250
           ++ V  F +M    G   D+  V  +LP    +     G ++    ++ G  + V+V   
Sbjct: 212 NVAVSLFREMTVGYGILPDTVGVVNILPVCGYLGLGLCGRQVHGFCVRSGLVEDVFVGNA 271

Query: 251 LVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLF----------- 299
           LV  Y+KCG++E A  +F  +   D+++ NAM++GY+ NG+ E +L LF           
Sbjct: 272 LVDMYAKCGKMEDANKVFERMRFKDVVTWNAMVTGYSQNGRFEDALSLFGKMREEKIESD 331

Query: 300 ------------------------RQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHS 335
                                   RQ+     R N  T++ L+      G L      H 
Sbjct: 332 VVTWSSVISGYAQRGFGCEAMDVFRQMCGCRCRPNVVTLMSLLSACASVGALLHGKETHC 391

Query: 336 FCLK-------SGIVSNSSVLTALSTVYSRLNEMEAARKLFDE--SSEKSLASWNAMIAG 386
           + +K       +    + +V+ AL  +Y++   +E AR +FDE    ++ + +W  MI G
Sbjct: 392 YSVKFILKGEHNDDTDDLAVINALIDMYAKCKSLEVARAMFDEICPKDRDVVTWTVMIGG 451

Query: 387 YTQNGLTEEAISLFQEMQA--SKVAPNPVTVSSILSACAQLGAISLGKWVHELV--KSRN 442
           Y Q+G    A+ LF EM    + + PN  T+S +L ACA+L A+  GK +H  V  +SR 
Sbjct: 452 YAQHGDANHALQLFSEMFKIDNCIVPNDFTISCVLMACARLAALKFGKQIHAYVLRRSRI 511

Query: 443 FESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFS 502
               ++V+  LIDMY+K G++  A+ +FD MS ++ V+W ++++GYG+HG   +A ++F 
Sbjct: 512 DSDVLFVANCLIDMYSKSGDVDTAQVVFDSMSKRNAVSWTSLLTGYGMHGRSEDAFRVFD 571

Query: 503 EMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRA 562
           EM    +   G+TFL VLYACSH+G+             D G  P  EHYACMVD+LGRA
Sbjct: 572 EMRKEALVLDGITFLVVLYACSHSGM-------------DFGVDPGVEHYACMVDLLGRA 618

Query: 563 GQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLS 622
           G+L +A+  I  + +EP P VW ALL AC IH +  LA  A++KL EL  +N G + LLS
Sbjct: 619 GRLGEAMRLINDMPIEPTPVVWIALLSACRIHSNEELAEFAAKKLLELKADNDGTYTLLS 678

Query: 623 NIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLE 682
           NIY+  R +   A +  ++K+  + K PG + ++       F  GD+ H QS  IY  L 
Sbjct: 679 NIYANARRWKDVARIGYLMKRTGIKKIPGWSWVKGRKGMETFYVGDRTHLQSQKIYETLA 738

Query: 683 KLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLR 742
            L  +++ A F      +LHDV++EEK   +  HSEKLA+A+ ++   PG  IRI KNLR
Sbjct: 739 DLIKRIK-ANF------SLHDVDDEEKGDQLSEHSEKLALAYAILTLPPGAPIRITKNLR 791

Query: 743 VCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           +C D H+A  +IS +    I++RD++RFH FK G CSC  YW
Sbjct: 792 ICGDFHSAITYISMIVEHEIILRDSSRFHQFKNGSCSCKGYW 833


>gi|449517557|ref|XP_004165812.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
           mitochondrial-like [Cucumis sativus]
          Length = 667

 Score =  456 bits (1173), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 248/627 (39%), Positives = 360/627 (57%), Gaps = 49/627 (7%)

Query: 159 VKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLP 218
           ++SAR VF+KM  + TV WN+M+SG  K                             V  
Sbjct: 89  LESARNVFEKMSVRTTVTWNTMLSGYTK-----------------------------VAG 119

Query: 219 AVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLIS 278
            V E  EL           K+   D V     LV +    G VE A   F  +   D+ S
Sbjct: 120 KVKEAHEL---------FDKIPEPDSVSYNIMLVCYLRSYG-VEAALAFFNKMPVKDIAS 169

Query: 279 CNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIH-SFC 337
            N +ISG+  NG+ + +  LF  +       N  +   +I  +   G L     ++ +  
Sbjct: 170 WNTLISGFAQNGQMQKAFDLFSVM----PEKNGVSWSAMISGYVEHGDLEAAEELYKNVG 225

Query: 338 LKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAI 397
           +KS +V      TA+ T Y +  ++E A ++F   + K+L +WN+MIAGY +N   E+ +
Sbjct: 226 MKSVVVE-----TAMLTGYMKFGKVELAERIFQRMAVKNLVTWNSMIAGYVENCRAEDGL 280

Query: 398 SLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMY 457
            +F+ M  S+V PNP+++SS+L  C+ L A+ LG+ +H+LV       +    T+LI MY
Sbjct: 281 KVFKTMIESRVRPNPLSLSSVLLGCSNLSALPLGRQMHQLVSKSPLSKDTTACTSLISMY 340

Query: 458 AKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFL 517
            KCG++  A +LF  M  K  ++WN MISGY  HG G +AL LF +M +  ++P  +TF+
Sbjct: 341 CKCGDLDSAWKLFLEMPRKDVISWNAMISGYAQHGAGRKALHLFDKMRNGTMKPDWITFV 400

Query: 518 SVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAV 577
           +V+ AC+HAG V  G + F+SM  + G +    HY C++D+LGRAG+L++A+  IK +  
Sbjct: 401 AVILACNHAGFVDLGVQYFKSMKKEFGIEAKPVHYTCVIDLLGRAGRLDEAVSLIKEMPF 460

Query: 578 EPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATV 637
           +P  A++G LLGAC IHK+ +LA  A+  L  LDP +   +V L+NIY+A   + Q A V
Sbjct: 461 KPHAAIYGTLLGACRIHKNLDLAEFAARNLLNLDPTSATGYVQLANIYAATNKWDQVAKV 520

Query: 638 RQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTET 697
           R+++K+  + K PG + IE+    H F S D+LHP+ T+I+  L +L+GKM+ AG+  + 
Sbjct: 521 RKMMKEHNVVKIPGYSWIEIKSVTHEFRSSDRLHPELTSIHKKLNELDGKMKLAGYVPDL 580

Query: 698 VTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKV 757
             ALHDVEEE KE ++  HSEKLAIAFGL+ T PGT IR+ KNLRVC DCH A KFIS +
Sbjct: 581 EFALHDVEEEHKEKLLLWHSEKLAIAFGLMKTAPGTPIRVFKNLRVCGDCHRAIKFISAI 640

Query: 758 TGRVIVVRDANRFHHFKGGVCSCGDYW 784
             R I+VRD  RFHHF+ G CSCGDYW
Sbjct: 641 EKREIIVRDTTRFHHFRNGFCSCGDYW 667



 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 99/343 (28%), Positives = 179/343 (52%), Gaps = 15/343 (4%)

Query: 153 YFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMV-RNGGTWLDST 211
           Y +   V++A   F+KMP KD   WN++ISG  +N   Q +  +F  M  +NG +W    
Sbjct: 146 YLRSYGVEAALAFFNKMPVKDIASWNTLISGFAQNGQMQKAFDLFSVMPEKNGVSW---- 201

Query: 212 SVAAVLPAVAEVQELRLGMEI-QCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRD 270
             +A++    E  +L    E+ + +G+K      V V T +++ Y K G+VE AE +F+ 
Sbjct: 202 --SAMISGYVEHGDLEAAEELYKNVGMK-----SVVVETAMLTGYMKFGKVELAERIFQR 254

Query: 271 IVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLT 330
           +   +L++ N+MI+GY  N + E  L++F+ ++ S  R N  ++  ++        L L 
Sbjct: 255 MAVKNLVTWNSMIAGYVENCRAEDGLKVFKTMIESRVRPNPLSLSSVLLGCSNLSALPLG 314

Query: 331 NCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQN 390
             +H    KS +  +++  T+L ++Y +  ++++A KLF E   K + SWNAMI+GY Q+
Sbjct: 315 RQMHQLVSKSPLSKDTTACTSLISMYCKCGDLDSAWKLFLEMPRKDVISWNAMISGYAQH 374

Query: 391 GLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLG-KWVHELVKSRNFESNIYV 449
           G   +A+ LF +M+   + P+ +T  +++ AC   G + LG ++   + K    E+    
Sbjct: 375 GAGRKALHLFDKMRNGTMKPDWITFVAVILACNHAGFVDLGVQYFKSMKKEFGIEAKPVH 434

Query: 450 STALIDMYAKCGNIVEARELFDLMSHKSEVT-WNTMISGYGLH 491
            T +ID+  + G + EA  L   M  K     + T++    +H
Sbjct: 435 YTCVIDLLGRAGRLDEAVSLIKEMPFKPHAAIYGTLLGACRIH 477



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 82/270 (30%), Positives = 132/270 (48%), Gaps = 20/270 (7%)

Query: 58  CYAR--------ALFFSIPKPDLFLFNVIIRGFSNN-EMPKSSICFYTHLRKNTALTPDN 108
           CY R        A F  +P  D+  +N +I GF+ N +M K+   F     KN       
Sbjct: 145 CYLRSYGVEAALAFFNKMPVKDIASWNTLISGFAQNGQMQKAFDLFSVMPEKN------G 198

Query: 109 FTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDK 168
            ++S ++S      D      L+ +    G  S + V  A++  Y KF  V+ A ++F +
Sbjct: 199 VSWSAMISGYVEHGDLEAAEELYKNV---GMKS-VVVETAMLTGYMKFGKVELAERIFQR 254

Query: 169 MPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRL 228
           M  K+ V WNSMI+G ++NC  +D + VF  M+ +     +  S+++VL   + +  L L
Sbjct: 255 MAVKNLVTWNSMIAGYVENCRAEDGLKVFKTMIES-RVRPNPLSLSSVLLGCSNLSALPL 313

Query: 229 GMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTC 288
           G ++  L  K          T L+S Y KCG+++ A  LF ++ R D+IS NAMISGY  
Sbjct: 314 GRQMHQLVSKSPLSKDTTACTSLISMYCKCGDLDSAWKLFLEMPRKDVISWNAMISGYAQ 373

Query: 289 NGKTESSLRLFRQLLASAERVNSSTIVGLI 318
           +G    +L LF ++     + +  T V +I
Sbjct: 374 HGAGRKALHLFDKMRNGTMKPDWITFVAVI 403



 Score = 53.1 bits (126), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 50/189 (26%), Positives = 90/189 (47%), Gaps = 27/189 (14%)

Query: 437 LVKSRNFESNIYVSTA--------LIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGY 488
           LV   N   N++V TA         I  + +  ++  AR +F+ MS ++ VTWNTM+SGY
Sbjct: 55  LVSPNNVTPNLHVDTASDVVSLNKTIASFVRACDLESARNVFEKMSVRTTVTWNTMLSGY 114

Query: 489 -GLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKP 547
             + G   EA +LF ++      P  V++ +++  C    L   G E   +  +    K 
Sbjct: 115 TKVAGKVKEAHELFDKI----PEPDSVSY-NIMLVCY---LRSYGVEAALAFFNKMPVKD 166

Query: 548 LAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKL 607
           +A  +  ++    + GQ++KA +    +  + G + W A++   + H D      A+E+L
Sbjct: 167 IAS-WNTLISGFAQNGQMQKAFDLFSVMPEKNGVS-WSAMISGYVEHGDLE----AAEEL 220

Query: 608 FELDPENVG 616
           +    +NVG
Sbjct: 221 Y----KNVG 225


>gi|225449732|ref|XP_002267472.1| PREDICTED: pentatricopeptide repeat-containing protein At4g02750-like
            [Vitis vinifera]
          Length = 1058

 Score =  456 bits (1172), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 264/764 (34%), Positives = 416/764 (54%), Gaps = 50/764 (6%)

Query: 58   CY----ARALFFSIPKPDLFLFNVIIRGFSN-NEMPKSSICFYTHLRKNTALTPDNFTYS 112
            CY    AR LF  +P+ +   + V+I G+ + ++  ++   F    R  T   PD   + 
Sbjct: 308  CYRMSEARELFDQMPERNSVSWMVMISGYVHISDYWEAWDVFVKMCR--TVARPDQSIFV 365

Query: 113  FVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEK 172
             VLSA +   D  +   L   AI +GY  D+ VG+A+++ Y +   +  A   F+ MPE+
Sbjct: 366  VVLSAITGLDDLELIGSLRPIAIKTGYEGDVVVGSAILNAYTRNGSLDLAMHFFETMPER 425

Query: 173  DTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGM-E 231
            +   W +MI+   +     D+I ++  +     T    T++      V  +Q+ RL   E
Sbjct: 426  NEYSWTTMIAAFAQCGRLDDAIQLYERVPEQ--TVATKTAMMTAYAQVGRIQKARLIFDE 483

Query: 232  IQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGK 291
            I         + +V     +++ Y++ G ++ A+ LF+ +   +  S  AMI+G+  N +
Sbjct: 484  I--------LNPNVVAWNAIIAGYTQNGMLKEAKDLFQKMPVKNSASWAAMIAGFVQNEE 535

Query: 292  TESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTA 351
            +  +L L  +L  S    + S+    +      G + +   IHS  +K+G   NS V+  
Sbjct: 536  SREALELLIELHRSGSVPSDSSFTSALSACANIGDVEIGRVIHSLAIKTGCQFNSYVMNG 595

Query: 352  LSTVYSRLNEMEA-------------------------------ARKLFDESSEKSLASW 380
            L ++Y++   +E                                AR +F++  ++ + SW
Sbjct: 596  LISMYAKCGNVEDGSHVFRTIRVKDTVSWNSLISGLSENYMLDDARVVFEKMPKRDVVSW 655

Query: 381  NAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKS 440
             A+I+ Y Q G  E A+ LF +M A  + PN +TV+S+LSAC  LGAI LG+  H L+  
Sbjct: 656  TAIISAYVQAGHGEVALDLFLDMLARGIKPNQLTVTSLLSACGNLGAIKLGEQFHALIFK 715

Query: 441  RNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQL 500
              F++ ++V  +LI MY KCG   +   +F+ M     +TWN ++ G   +G G EA+++
Sbjct: 716  LGFDTFLFVGNSLITMYFKCG-YEDGFCVFEEMPEHDLITWNAVLVGCAQNGLGKEAIKI 774

Query: 501  FSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILG 560
            F +M   GI P  ++FL VL ACSHAGLV EG   F SM   +G  PL  HY CMVD+LG
Sbjct: 775  FEQMEVEGILPDQMSFLGVLCACSHAGLVDEGWAHFNSMTQKYGIMPLVYHYTCMVDLLG 834

Query: 561  RAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVL 620
            RAG L +A   I+ + V+P   +W ALLGAC IH++  L +  +E+LF++       +VL
Sbjct: 835  RAGYLSEAEALIENMPVKPDSVIWEALLGACRIHRNVELGQRVAERLFQMTKPKSATYVL 894

Query: 621  LSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAM 680
            LSN+++++  + + A +R+++K + L K PG + I+V    H F +GD+ H Q   IY+ 
Sbjct: 895  LSNLFASQGMWDKVAEIRKLMKDQGLTKEPGISWIQVKNKLHCFVTGDRTHDQIEEIYSA 954

Query: 681  LEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKN 740
            L++  G  R  G+  +T   LHDVEEE+K+  +  HSEKLA+ FG+++T  G+ I+IIKN
Sbjct: 955  LKEYYGCFRATGYMPDTNFVLHDVEEEQKQNELLYHSEKLAVVFGILSTPNGSPIQIIKN 1014

Query: 741  LRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
            LR+C DCHT  KF+SKVT R I++RD NRFHHF+ G CSCGDYW
Sbjct: 1015 LRICGDCHTFMKFMSKVTLRKIIIRDGNRFHHFRDGSCSCGDYW 1058



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 158/641 (24%), Positives = 269/641 (41%), Gaps = 161/641 (25%)

Query: 16  LKGAKTQSQLTQTHAQ----------IIIH--GFQNDLSTVTKL------AHRLSDFKAT 57
           LK   +QS+L   HA+          +I H  G +N  +  T L         L      
Sbjct: 128 LKHLTSQSKLNTRHARWMDYLQQFKFVIRHKSGAKNKETPQTHLFQCNTRIQELGRLGRV 187

Query: 58  CYARALFFSIPKPDLFLFNVIIRGFSNN-EMPKSSICFYTHLRKNTALTPDNFTYSFVLS 116
             AR +F  + + D+  +N +I G+S N ++ ++ + F   + KN               
Sbjct: 188 EEARRVFNEMIQRDVVSWNSMINGYSQNGKVDEARLLFDAFVGKNI-------------- 233

Query: 117 AASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVL 176
                  R+  +LL G+A                    K   ++ AR+VF+ M E++ V 
Sbjct: 234 -------RTWTILLTGYA--------------------KEGRIEEAREVFESMTERNVVS 266

Query: 177 WNSMISGLMKNCCFQDSIWVFGDMV-RNGGTWLDSTSVAAVLPAVAEVQELRLGM-EIQC 234
           WN+MISG ++N   +++  +F +M  +N  +W    +       ++E +EL   M E   
Sbjct: 267 WNAMISGYVQNGDLKNARKLFDEMPEKNVASWNSVVTGYCHCYRMSEARELFDQMPERNS 326

Query: 235 LGLKLGFHDHVYV---LTGLVSFYSKCGEVERAELLFRDIV----------------RP- 274
           +   +    +V++         F   C  V R +     +V                RP 
Sbjct: 327 VSWMVMISGYVHISDYWEAWDVFVKMCRTVARPDQSIFVVVLSAITGLDDLELIGSLRPI 386

Query: 275 --------DLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGH 326
                   D++  +A+++ YT NG  + ++  F  +    ER N  +   +I  F   G 
Sbjct: 387 AIKTGYEGDVVVGSAILNAYTRNGSLDLAMHFFETM---PER-NEYSWTTMIAAFAQCGR 442

Query: 327 LHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAG 386
           L     ++    +  + + ++++TA    Y+++  ++ AR +FDE    ++ +WNA+IAG
Sbjct: 443 LDDAIQLYERVPEQTVATKTAMMTA----YAQVGRIQKARLIFDEILNPNVVAWNAIIAG 498

Query: 387 YTQNGLTEEAISLFQEMQASKVA-------------------------------PNPVTV 415
           YTQNG+ +EA  LFQ+M     A                               P+  + 
Sbjct: 499 YTQNGMLKEAKDLFQKMPVKNSASWAAMIAGFVQNEESREALELLIELHRSGSVPSDSSF 558

Query: 416 SSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSH 475
           +S LSACA +G + +G+ +H L      + N YV   LI MYAKCGN+ +   +F  +  
Sbjct: 559 TSALSACANIGDVEIGRVIHSLAIKTGCQFNSYVMNGLISMYAKCGNVEDGSHVFRTIRV 618

Query: 476 KSEVTWNTMISG-------------------------------YGLHGHGLEALQLFSEM 504
           K  V+WN++ISG                               Y   GHG  AL LF +M
Sbjct: 619 KDTVSWNSLISGLSENYMLDDARVVFEKMPKRDVVSWTAIISAYVQAGHGEVALDLFLDM 678

Query: 505 LHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGF 545
           L  GI+P+ +T  S+L AC + G ++ G++ F ++I   GF
Sbjct: 679 LARGIKPNQLTVTSLLSACGNLGAIKLGEQ-FHALIFKLGF 718



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 118/475 (24%), Positives = 213/475 (44%), Gaps = 32/475 (6%)

Query: 159 VKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMV-RNGGTWLDSTSVAAVL 217
           V+ AR+VF++M ++D V WNSMI+G  +N    ++  +F   V +N  TW    +  A  
Sbjct: 187 VEEARRVFNEMIQRDVVSWNSMINGYSQNGKVDEARLLFDAFVGKNIRTWTILLTGYAKE 246

Query: 218 PAVAEVQELRLGME--------------IQCLGLKLGF-------HDHVYVLTGLVSFYS 256
             + E +E+   M               +Q   LK            +V     +V+ Y 
Sbjct: 247 GRIEEAREVFESMTERNVVSWNAMISGYVQNGDLKNARKLFDEMPEKNVASWNSVVTGYC 306

Query: 257 KCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVG 316
            C  +  A  LF  +   + +S   MISGY        +  +F ++  +  R + S  V 
Sbjct: 307 HCYRMSEARELFDQMPERNSVSWMVMISGYVHISDYWEAWDVFVKMCRTVARPDQSIFVV 366

Query: 317 LIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKS 376
           ++        L L   +    +K+G   +  V +A+   Y+R   ++ A   F+   E++
Sbjct: 367 VLSAITGLDDLELIGSLRPIAIKTGYEGDVVVGSAILNAYTRNGSLDLAMHFFETMPERN 426

Query: 377 LASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHE 436
             SW  MIA + Q G  ++AI L++ +    VA    T +++++A AQ+G I   + + +
Sbjct: 427 EYSWTTMIAAFAQCGRLDDAIQLYERVPEQTVA----TKTAMMTAYAQVGRIQKARLIFD 482

Query: 437 LVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLE 496
            +       N+    A+I  Y + G + EA++LF  M  K+  +W  MI+G+  +    E
Sbjct: 483 EI----LNPNVVAWNAIIAGYTQNGMLKEAKDLFQKMPVKNSASWAAMIAGFVQNEESRE 538

Query: 497 ALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMV 556
           AL+L  E+  SG  PS  +F S L AC++ G V  G  +  S+    G +  +     ++
Sbjct: 539 ALELLIELHRSGSVPSDSSFTSALSACANIGDVEIG-RVIHSLAIKTGCQFNSYVMNGLI 597

Query: 557 DILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELD 611
            +  + G +E      + + V+   + W +L+     +   + ARV  EK+ + D
Sbjct: 598 SMYAKCGNVEDGSHVFRTIRVKDTVS-WNSLISGLSENYMLDDARVVFEKMPKRD 651



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 88/390 (22%), Positives = 174/390 (44%), Gaps = 36/390 (9%)

Query: 244 HVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLL 303
           H++     +    + G VE A  +F ++++ D++S N+MI+GY+ NGK + +  LF   +
Sbjct: 170 HLFQCNTRIQELGRLGRVEEARRVFNEMIQRDVVSWNSMINGYSQNGKVDEARLLFDAFV 229

Query: 304 ASAERVNSSTIVG------LIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTA------ 351
               R  +  + G      +      F  +   N +    + SG V N  +  A      
Sbjct: 230 GKNIRTWTILLTGYAKEGRIEEAREVFESMTERNVVSWNAMISGYVQNGDLKNARKLFDE 289

Query: 352 -----------LSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLF 400
                      + T Y     M  AR+LFD+  E++  SW  MI+GY       EA  +F
Sbjct: 290 MPEKNVASWNSVVTGYCHCYRMSEARELFDQMPERNSVSWMVMISGYVHISDYWEAWDVF 349

Query: 401 QEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKC 460
            +M  +   P+      +LSA   L  + L   +  +     +E ++ V +A+++ Y + 
Sbjct: 350 VKMCRTVARPDQSIFVVVLSAITGLDDLELIGSLRPIAIKTGYEGDVVVGSAILNAYTRN 409

Query: 461 GNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVL 520
           G++  A   F+ M  ++E +W TMI+ +   G   +A+QL+  +    +     T  +++
Sbjct: 410 GSLDLAMHFFETMPERNEYSWTTMIAAFAQCGRLDDAIQLYERVPEQTV----ATKTAMM 465

Query: 521 YACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPG 580
            A +  G +++   IF  +++     P    +  ++    + G L++A +  + + V+  
Sbjct: 466 TAYAQVGRIQKARLIFDEILN-----PNVVAWNAIIAGYTQNGMLKEAKDLFQKMPVK-N 519

Query: 581 PAVWGALLGACMIHKDTNLARVASEKLFEL 610
            A W A++   + ++++   R A E L EL
Sbjct: 520 SASWAAMIAGFVQNEES---REALELLIEL 546



 Score = 59.3 bits (142), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 50/197 (25%), Positives = 92/197 (46%), Gaps = 19/197 (9%)

Query: 444 ESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSE 503
           +++++     I    + G + EAR +F+ M  +  V+WN+MI+GY  +G   EA  LF  
Sbjct: 168 QTHLFQCNTRIQELGRLGRVEEARRVFNEMIQRDVVSWNSMINGYSQNGKVDEARLLFDA 227

Query: 504 MLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAG 563
            +   IR    T+  +L   +  G + E  E+F+SM   +        +  M+    + G
Sbjct: 228 FVGKNIR----TWTILLTGYAKEGRIEEAREVFESMTERN-----VVSWNAMISGYVQNG 278

Query: 564 QLEKALEFIKGLAVEPGPAVWGALL-GACMIHKDTNLARVASEKLFELDPE--NVGYHVL 620
            L+ A +    +  E   A W +++ G C  ++ +      + +LF+  PE  +V + V+
Sbjct: 279 DLKNARKLFDEMP-EKNVASWNSVVTGYCHCYRMSE-----ARELFDQMPERNSVSWMVM 332

Query: 621 LSNIYSAERDYLQAATV 637
           +S  Y    DY +A  V
Sbjct: 333 ISG-YVHISDYWEAWDV 348


>gi|359497567|ref|XP_002265980.2| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
           mitochondrial-like, partial [Vitis vinifera]
          Length = 599

 Score =  456 bits (1172), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 255/627 (40%), Positives = 353/627 (56%), Gaps = 49/627 (7%)

Query: 159 VKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVL- 217
           + SA +VF+ M  K TV WNSM++G                  R G        VA  L 
Sbjct: 21  LNSALRVFESMTVKTTVTWNSMLAGYSN---------------RRG-----KIKVARQLF 60

Query: 218 PAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLI 277
             + E       + + C                    Y    +VE A L F  +   D  
Sbjct: 61  DRIPEPDIFSYNIMLAC--------------------YLHNADVESARLFFDQMPVKDTA 100

Query: 278 SCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFC 337
           S N MISG++ NG  + +  LF   L    R NS +   +I  +   G L L   +    
Sbjct: 101 SWNTMISGFSQNGMMDQARELF---LVMPVR-NSVSWNAMISGYVESGDLDLAKQLFEVA 156

Query: 338 LKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAI 397
               +V+     TA+ T + +  ++E A K F+E   K+L +WNAMIAGY +N   E  +
Sbjct: 157 PVRSVVA----WTAMITGFMKFGKIELAEKYFEEMPMKNLVTWNAMIAGYIENCQAENGL 212

Query: 398 SLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMY 457
            LF+ M  S   PNP ++SS+L  C+ L A+ LGK VH+L+       NI   T+L+ MY
Sbjct: 213 KLFKRMVESGFRPNPSSLSSVLLGCSNLSALKLGKQVHQLICKSPVSWNITAGTSLLSMY 272

Query: 458 AKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFL 517
            KCG++ +A +LF +M  K  VTWN MISGY  HG G +AL LF +M   G++P  +TF+
Sbjct: 273 CKCGDLEDAWKLFLVMPQKDVVTWNAMISGYAQHGAGEKALYLFDKMRDEGMKPDWITFV 332

Query: 518 SVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAV 577
           +VL AC+HAG V  G E F SM+ D+G +   +HY C+VD+LGR G+L +A++ IK +  
Sbjct: 333 AVLSACNHAGFVDLGIEYFNSMVRDYGVEAKPDHYTCVVDLLGRGGKLVEAVDLIKKMPF 392

Query: 578 EPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATV 637
           +P  A++G LLGAC IHK+  LA  A++ L  LDPE+   +V L+N+Y+A   +   A V
Sbjct: 393 KPHSAIFGTLLGACRIHKNLELAEFAAKNLLNLDPESAAGYVQLANVYAAMNRWDHVAMV 452

Query: 638 RQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTET 697
           R+ +K  K+ K PG + IEV    H F SGD++HP+   I+  L +L  KMR AG+  + 
Sbjct: 453 RRSMKDNKVIKTPGYSWIEVKSVVHEFRSGDRIHPELAFIHEKLNELERKMRLAGYVPDL 512

Query: 698 VTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKV 757
             ALHDV EE+K+ ++  HSEKLAIA+GLI    GT IR+ KNLRVC DCH+ATK+IS +
Sbjct: 513 EYALHDVGEEQKKQILLRHSEKLAIAYGLIRMPLGTPIRVFKNLRVCGDCHSATKYISAI 572

Query: 758 TGRVIVVRDANRFHHFKGGVCSCGDYW 784
            GRVI+VRD  RFHHF+ G CSCGDYW
Sbjct: 573 EGRVIIVRDTTRFHHFRQGECSCGDYW 599



 Score =  166 bits (419), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 104/337 (30%), Positives = 181/337 (53%), Gaps = 12/337 (3%)

Query: 142 DLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDM- 200
           D+F    ++  Y   + V+SAR  FD+MP KDT  WN+MISG  +N     +  +F  M 
Sbjct: 67  DIFSYNIMLACYLHNADVESARLFFDQMPVKDTASWNTMISGFSQNGMMDQARELFLVMP 126

Query: 201 VRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGE 260
           VRN  +W       A++    E  +L L  ++     ++     V   T +++ + K G+
Sbjct: 127 VRNSVSW------NAMISGYVESGDLDLAKQL----FEVAPVRSVVAWTAMITGFMKFGK 176

Query: 261 VERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPV 320
           +E AE  F ++   +L++ NAMI+GY  N + E+ L+LF++++ S  R N S++  ++  
Sbjct: 177 IELAEKYFEEMPMKNLVTWNAMIAGYIENCQAENGLKLFKRMVESGFRPNPSSLSSVLLG 236

Query: 321 FYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASW 380
                 L L   +H    KS +  N +  T+L ++Y +  ++E A KLF    +K + +W
Sbjct: 237 CSNLSALKLGKQVHQLICKSPVSWNITAGTSLLSMYCKCGDLEDAWKLFLVMPQKDVVTW 296

Query: 381 NAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLG-KWVHELVK 439
           NAMI+GY Q+G  E+A+ LF +M+   + P+ +T  ++LSAC   G + LG ++ + +V+
Sbjct: 297 NAMISGYAQHGAGEKALYLFDKMRDEGMKPDWITFVAVLSACNHAGFVDLGIEYFNSMVR 356

Query: 440 SRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHK 476
               E+     T ++D+  + G +VEA +L   M  K
Sbjct: 357 DYGVEAKPDHYTCVVDLLGRGGKLVEAVDLIKKMPFK 393



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 80/286 (27%), Positives = 148/286 (51%), Gaps = 33/286 (11%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           AR LF  IP+PD+F +N+++  + +N   +S+  F+  +        D  +++ ++S  S
Sbjct: 56  ARQLFDRIPEPDIFSYNIMLACYLHNADVESARLFFDQMP-----VKDTASWNTMISGFS 110

Query: 120 --ACCDRSIGVLL--------HGHAIVSGY--------GSDLFVGA---------ALVDL 152
                D++  + L          +A++SGY           LF  A         A++  
Sbjct: 111 QNGMMDQARELFLVMPVRNSVSWNAMISGYVESGDLDLAKQLFEVAPVRSVVAWTAMITG 170

Query: 153 YFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTS 212
           + KF  ++ A K F++MP K+ V WN+MI+G ++NC  ++ + +F  MV +G    + +S
Sbjct: 171 FMKFGKIELAEKYFEEMPMKNLVTWNAMIAGYIENCQAENGLKLFKRMVESGFR-PNPSS 229

Query: 213 VAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIV 272
           +++VL   + +  L+LG ++  L  K     ++   T L+S Y KCG++E A  LF  + 
Sbjct: 230 LSSVLLGCSNLSALKLGKQVHQLICKSPVSWNITAGTSLLSMYCKCGDLEDAWKLFLVMP 289

Query: 273 RPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLI 318
           + D+++ NAMISGY  +G  E +L LF ++     + +  T V ++
Sbjct: 290 QKDVVTWNAMISGYAQHGAGEKALYLFDKMRDEGMKPDWITFVAVL 335



 Score = 75.9 bits (185), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 61/257 (23%), Positives = 107/257 (41%), Gaps = 67/257 (26%)

Query: 340 SGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQ---------- 389
           S ++S++ V+T     + R  ++ +A ++F+  + K+  +WN+M+AGY+           
Sbjct: 3   SNVISSNRVITN----HIRSGDLNSALRVFESMTVKTTVTWNSMLAGYSNRRGKIKVARQ 58

Query: 390 ----------------------NGLTEEAISLFQEMQASKVAP----------------- 410
                                 N   E A   F +M     A                  
Sbjct: 59  LFDRIPEPDIFSYNIMLACYLHNADVESARLFFDQMPVKDTASWNTMISGFSQNGMMDQA 118

Query: 411 ----------NPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKC 460
                     N V+ ++++S   + G + L K + E+   R    ++   TA+I  + K 
Sbjct: 119 RELFLVMPVRNSVSWNAMISGYVESGDLDLAKQLFEVAPVR----SVVAWTAMITGFMKF 174

Query: 461 GNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVL 520
           G I  A + F+ M  K+ VTWN MI+GY  +      L+LF  M+ SG RP+  +  SVL
Sbjct: 175 GKIELAEKYFEEMPMKNLVTWNAMIAGYIENCQAENGLKLFKRMVESGFRPNPSSLSSVL 234

Query: 521 YACSHAGLVREGDEIFQ 537
             CS+   ++ G ++ Q
Sbjct: 235 LGCSNLSALKLGKQVHQ 251



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 46/172 (26%), Positives = 84/172 (48%), Gaps = 2/172 (1%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           A   F  +P  +L  +N +I G+  N   ++ +  +  + + +   P+  + S VL   S
Sbjct: 180 AEKYFEEMPMKNLVTWNAMIAGYIENCQAENGLKLFKRMVE-SGFRPNPSSLSSVLLGCS 238

Query: 120 ACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNS 179
                 +G  +H     S    ++  G +L+ +Y K   ++ A K+F  MP+KD V WN+
Sbjct: 239 NLSALKLGKQVHQLICKSPVSWNITAGTSLLSMYCKCGDLEDAWKLFLVMPQKDVVTWNA 298

Query: 180 MISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGME 231
           MISG  ++   + ++++F D +R+ G   D  +  AVL A      + LG+E
Sbjct: 299 MISGYAQHGAGEKALYLF-DKMRDEGMKPDWITFVAVLSACNHAGFVDLGIE 349



 Score = 47.0 bits (110), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 43/172 (25%), Positives = 76/172 (44%), Gaps = 21/172 (12%)

Query: 445 SNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGY-GLHGHGLEALQLFSE 503
           SN+  S  +I  + + G++  A  +F+ M+ K+ VTWN+M++GY    G    A QLF  
Sbjct: 3   SNVISSNRVITNHIRSGDLNSALRVFESMTVKTTVTWNSMLAGYSNRRGKIKVARQLFDR 62

Query: 504 MLHSGIRPSGVTFLSVLYACS-HAGLVREGDEIFQSMIHDHGFKPLAE--HYACMVDILG 560
                I    +   +++ AC  H   V      F  M       P+ +   +  M+    
Sbjct: 63  -----IPEPDIFSYNIMLACYLHNADVESARLFFDQM-------PVKDTASWNTMISGFS 110

Query: 561 RAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDP 612
           + G +++A E    + V      W A++   +   D +LA+    +LFE+ P
Sbjct: 111 QNGMMDQARELFLVMPVR-NSVSWNAMISGYVESGDLDLAK----QLFEVAP 157


>gi|297722071|ref|NP_001173399.1| Os03g0317100 [Oryza sativa Japonica Group]
 gi|255674461|dbj|BAH92127.1| Os03g0317100 [Oryza sativa Japonica Group]
          Length = 706

 Score =  456 bits (1172), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 246/663 (37%), Positives = 387/663 (58%), Gaps = 35/663 (5%)

Query: 148 ALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGL-------------MKNCCFQDSI 194
           AL+  YF+     +A  +F +MP +D   +N++ISGL             + +  F  S+
Sbjct: 53  ALLAGYFRNRLPDAALGLFRRMPSRDLASYNALISGLSLRRQTLPDAAAALASIPFPPSV 112

Query: 195 WVFGDMVR---NGGTWLDSTSVAAVLPAVAEVQELRL--GM-------EIQCLGLKLGFH 242
             F  ++R     G   D+  +   +P    V    L  G+       E + L  ++   
Sbjct: 113 VSFTSLLRGYVRHGLLADAIRLFQQMPERNHVSYTVLLGGLLDAGRVNEARRLFDEMPDR 172

Query: 243 DHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQL 302
           D V   T ++S Y + G +  A  LF ++ + +++S  AMISGY  NG+   + +LF  +
Sbjct: 173 D-VVAWTAMLSGYCQAGRITEARALFDEMPKRNVVSWTAMISGYAQNGEVNLARKLFEVM 231

Query: 303 LASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEM 362
               E   ++ +VG I      GH+     + +   +  + + ++++      + +   +
Sbjct: 232 PERNEVSWTAMLVGYIQA----GHVEDAAELFNAMPEHPVAACNAMMVG----FGQRGMV 283

Query: 363 EAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSAC 422
           +AA+ +F++  E+   +W+AMI  Y QN    EA+S F+EM    V PN  +V SIL+ C
Sbjct: 284 DAAKTVFEKMCERDDGTWSAMIKAYEQNEFLMEALSTFREMLWRGVRPNYPSVISILTVC 343

Query: 423 AQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWN 482
           A L  +  G+ VH  +   +F+ +++  +ALI MY KCGN+ +A+ +F     K  V WN
Sbjct: 344 AALAVLDYGREVHAAMLRCSFDMDVFAVSALITMYIKCGNLDKAKRVFHTFEPKDIVMWN 403

Query: 483 TMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHD 542
           +MI+GY  HG G +AL +F +M  +G+ P G+T++  L ACS+ G V+EG EIF SM  +
Sbjct: 404 SMITGYAQHGLGEQALGIFHDMRLAGMSPDGITYIGALTACSYTGKVKEGREIFNSMTVN 463

Query: 543 HGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARV 602
              +P AEHY+CMVD+LGR+G +E+A + IK + VEP   +WGAL+GAC +H++  +A  
Sbjct: 464 SSIRPGAEHYSCMVDLLGRSGLVEEAFDLIKNMPVEPDAVIWGALMGACRMHRNAEIAEF 523

Query: 603 ASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPH 662
           A++KL EL+P N G +VLLS+IY++   +  A+ +R+ +  R L K+PGC+ IE     H
Sbjct: 524 AAKKLLELEPGNAGPYVLLSHIYTSVGRWEDASKMRKFISSRNLNKSPGCSWIEYDKRVH 583

Query: 663 VFTSGDQL-HPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLA 721
           +FTSGD L HP+  AI  +LEKL+G + E+G+  +    LHD++EE+K   ++ HSE+ A
Sbjct: 584 LFTSGDVLAHPEHAAILRILEKLDGLLMESGYSADGSFVLHDIDEEQKSHSLRYHSERQA 643

Query: 722 IAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCG 781
           +A+GL+    G  IR++KNLRVC DCH+A K I+K+T R I++RDANRFHHFK G CSC 
Sbjct: 644 VAYGLLKIPEGMPIRVMKNLRVCGDCHSAIKLIAKITSREIILRDANRFHHFKDGFCSCR 703

Query: 782 DYW 784
           DYW
Sbjct: 704 DYW 706



 Score =  119 bits (297), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 116/512 (22%), Positives = 222/512 (43%), Gaps = 60/512 (11%)

Query: 1   MSMKTPQSRNLFLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCY- 59
           M ++T  S N  L+       +++L      +       DL++   L   LS  + T   
Sbjct: 43  MPLRTTASYNALLA----GYFRNRLPDAALGLFRRMPSRDLASYNALISGLSLRRQTLPD 98

Query: 60  ARALFFSIP-KPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAA 118
           A A   SIP  P +  F  ++RG+  + +   +I  +  + +      ++ +Y+ +L   
Sbjct: 99  AAAALASIPFPPSVVSFTSLLRGYVRHGLLADAIRLFQQMPER-----NHVSYTVLL--- 150

Query: 119 SACCDRSIGVLLHGHAIVSGY-------GSDLFVGAALVDLYFKFSWVKSARKVFDKMPE 171
                   G LL    +             D+    A++  Y +   +  AR +FD+MP+
Sbjct: 151 --------GGLLDAGRVNEARRLFDEMPDRDVVAWTAMLSGYCQAGRITEARALFDEMPK 202

Query: 172 KDTVLWNSMISGLMKNCCFQDSIWVFGDMV-RNGGTWLDSTSVAAVLPA--VAEVQELRL 228
           ++ V W +MISG  +N     +  +F  M  RN  +W  +  +   + A  V +  EL  
Sbjct: 203 RNVVSWTAMISGYAQNGEVNLARKLFEVMPERNEVSW--TAMLVGYIQAGHVEDAAELFN 260

Query: 229 GME----IQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMIS 284
            M       C  + +GF               + G V+ A+ +F  +   D  + +AMI 
Sbjct: 261 AMPEHPVAACNAMMVGF--------------GQRGMVDAAKTVFEKMCERDDGTWSAMIK 306

Query: 285 GYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVS 344
            Y  N     +L  FR++L    R N  +++ ++ V      L     +H+  L+     
Sbjct: 307 AYEQNEFLMEALSTFREMLWRGVRPNYPSVISILTVCAALAVLDYGREVHAAMLRCSFDM 366

Query: 345 NSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQ 404
           +   ++AL T+Y +   ++ A+++F     K +  WN+MI GY Q+GL E+A+ +F +M+
Sbjct: 367 DVFAVSALITMYIKCGNLDKAKRVFHTFEPKDIVMWNSMITGYAQHGLGEQALGIFHDMR 426

Query: 405 ASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVS----TALIDMYAKC 460
            + ++P+ +T    L+AC+  G +  G+   E+  S    S+I       + ++D+  + 
Sbjct: 427 LAGMSPDGITYIGALTACSYTGKVKEGR---EIFNSMTVNSSIRPGAEHYSCMVDLLGRS 483

Query: 461 GNIVEARELFDLMSHKSE-VTWNTMISGYGLH 491
           G + EA +L   M  + + V W  ++    +H
Sbjct: 484 GLVEEAFDLIKNMPVEPDAVIWGALMGACRMH 515



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 86/349 (24%), Positives = 161/349 (46%), Gaps = 72/349 (20%)

Query: 252 VSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNS 311
           ++  ++ G +E A   F  +      S NA+++GY  N   +++L LFR++ +      +
Sbjct: 24  IAHLARAGNIEGARAAFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSRDLASYN 83

Query: 312 STIVGL------IP--------VFYPFGHLHLTNCIHSFCLKSGIVSNS----------- 346
           + I GL      +P        + +P   +  T+ +  + ++ G+++++           
Sbjct: 84  ALISGLSLRRQTLPDAAAALASIPFPPSVVSFTSLLRGY-VRHGLLADAIRLFQQMPERN 142

Query: 347 ----SVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQE 402
               +VL        R+NE   AR+LFDE  ++ + +W AM++GY Q G   EA +LF E
Sbjct: 143 HVSYTVLLGGLLDAGRVNE---ARRLFDEMPDRDVVAWTAMLSGYCQAGRITEARALFDE 199

Query: 403 MQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGN 462
           M    V    V+ ++++S  AQ G ++L + + E++  RN  S     TA++  Y + G+
Sbjct: 200 MPKRNV----VSWTAMISGYAQNGEVNLARKLFEVMPERNEVS----WTAMLVGYIQAGH 251

Query: 463 IVEARELFDLMS-------------------------------HKSEVTWNTMISGYGLH 491
           + +A ELF+ M                                 + + TW+ MI  Y  +
Sbjct: 252 VEDAAELFNAMPEHPVAACNAMMVGFGQRGMVDAAKTVFEKMCERDDGTWSAMIKAYEQN 311

Query: 492 GHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMI 540
              +EAL  F EML  G+RP+  + +S+L  C+   ++  G E+  +M+
Sbjct: 312 EFLMEALSTFREMLWRGVRPNYPSVISILTVCAALAVLDYGREVHAAML 360


>gi|225441187|ref|XP_002266244.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Vitis vinifera]
          Length = 722

 Score =  456 bits (1172), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 247/705 (35%), Positives = 394/705 (55%), Gaps = 40/705 (5%)

Query: 120 ACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKF---SWVKSARKVFDKMPEKDTVL 176
           +C     G+ +H   IV+G    +F  + L+  +        +  +R +F ++   +  +
Sbjct: 18  SCKSFKQGLQIHAQTIVNGLHHQIFSISRLISFFSLLGSKDGLDHSRLLFSQIDCPNLFM 77

Query: 177 WNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLG 236
           WN+MI G  ++   +++I ++  M+  G    ++ +   +L + A +  L  G E+    
Sbjct: 78  WNTMIRGYSRSDNPREAIVLYMSMIAKGIAPPNNFTFPFLLNSCARLSSLEPGHEVHSHI 137

Query: 237 LKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSL 296
           +K GF   ++V   L+  YS  G +  A  LF + +  DL+S N MI GY    + ES+L
Sbjct: 138 IKHGFESDLFVRNALIHLYSVFGNLNLARTLFDESLVRDLVSYNTMIKGYAEVNQPESAL 197

Query: 297 RLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHS------------FCLKSGIVS 344
            LF ++  S    +  T V L  V       ++   IH+              LKS IV 
Sbjct: 198 CLFGEMQNSGILPDEFTFVALFSVCSVLNEPNVGKQIHAQVYKNLRSIDSNILLKSAIVD 257

Query: 345 ----------------------NSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNA 382
                                 +++  +++   Y+R  E+  ARKLF+   E+ + SW A
Sbjct: 258 MYAKCGLINIAERVFSTMGTSKSAAAWSSMVCGYARCGEINVARKLFNHMHERDVISWTA 317

Query: 383 MIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWV-HELVKSR 441
           MI+GY+Q G   EA+ LF+EM+A  + P+ VT+ ++LSACA+LGA  LGK + H+ +++ 
Sbjct: 318 MISGYSQAGQCSEALELFKEMEALGIKPDEVTLVAVLSACARLGAFDLGKRLYHQYIENG 377

Query: 442 NFESNIYVSTALIDMYAKCGNIVEARELFDLMSH--KSEVTWNTMISGYGLHGHGLEALQ 499
            F  N  ++ A++DMYAKCG+I  A E+F  +    K+   +N+MI+G   HG G  A+ 
Sbjct: 378 VFNQNTILTAAVMDMYAKCGSIDSALEIFRRVGKNMKTGFVFNSMIAGLAQHGLGETAIT 437

Query: 500 LFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDIL 559
           +F E++ +G++P  VTF+ VL AC H+GL+ EG ++F+SM + +G KP  EHY CMVD+L
Sbjct: 438 VFRELISTGLKPDEVTFVGVLCACGHSGLIEEGKKLFESMFNAYGIKPQMEHYGCMVDLL 497

Query: 560 GRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHV 619
           GR G LE+A + ++ +  E    +W ALL AC  H +  +  +A +KL E++ ++   +V
Sbjct: 498 GRYGCLEEAYDLVQKMPFEANSVIWRALLSACRTHGNVKIGEIAGQKLLEMEAQHGARYV 557

Query: 620 LLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYA 679
           LLSNI +    + +A  VR+V++   + K PG + IE+GG  H F + D+ HPQ   I  
Sbjct: 558 LLSNILADANQWEEARQVRKVMEDHGIRKPPGWSYIELGGAIHRFVASDKSHPQGKEIEL 617

Query: 680 MLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIK 739
           ML+ +  +++ AG+   T   + D++EEEKE ++  HSEKLA+AFGL+   P   IRI+K
Sbjct: 618 MLKDMAMRLKSAGYVPNTAQVMFDIDEEEKESVVSYHSEKLALAFGLMYCSPTDTIRIVK 677

Query: 740 NLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           NLR+C DCH A K +S++ GR I VRD  RFHHF+ G CSC D+W
Sbjct: 678 NLRICADCHKAFKLVSEIYGREITVRDTMRFHHFRNGSCSCMDFW 722



 Score =  204 bits (519), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 145/534 (27%), Positives = 267/534 (50%), Gaps = 49/534 (9%)

Query: 3   MKTPQSRNLFLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATC---Y 59
           ++ P S    L LL+  K+  Q  Q HAQ I++G  + + ++++L    S   +     +
Sbjct: 7   LENPSS----LCLLESCKSFKQGLQIHAQTIVNGLHHQIFSISRLISFFSLLGSKDGLDH 62

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           +R LF  I  P+LF++N +IRG+S ++ P+ +I  Y  +       P+NFT+ F+L++ +
Sbjct: 63  SRLLFSQIDCPNLFMWNTMIRGYSRSDNPREAIVLYMSMIAKGIAPPNNFTFPFLLNSCA 122

Query: 120 ACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNS 179
                  G  +H H I  G+ SDLFV  AL+ LY  F  +  AR +FD+   +D V +N+
Sbjct: 123 RLSSLEPGHEVHSHIIKHGFESDLFVRNALIHLYSVFGNLNLARTLFDESLVRDLVSYNT 182

Query: 180 MISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQC----- 234
           MI G  +    + ++ +FG+M +N G   D  +  A+    + + E  +G +I       
Sbjct: 183 MIKGYAEVNQPESALCLFGEM-QNSGILPDEFTFVALFSVCSVLNEPNVGKQIHAQVYKN 241

Query: 235 -------LGLKLGFHDHVYVLTGLVSF-----------------------YSKCGEVERA 264
                  + LK    D +Y   GL++                        Y++CGE+  A
Sbjct: 242 LRSIDSNILLKSAIVD-MYAKCGLINIAERVFSTMGTSKSAAAWSSMVCGYARCGEINVA 300

Query: 265 ELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPF 324
             LF  +   D+IS  AMISGY+  G+   +L LF+++ A   + +  T+V ++      
Sbjct: 301 RKLFNHMHERDVISWTAMISGYSQAGQCSEALELFKEMEALGIKPDEVTLVAVLSACARL 360

Query: 325 GHLHLTNCIHSFCLKSGIVSNSSVLT-ALSTVYSRLNEMEAARKLFDESSE--KSLASWN 381
           G   L   ++   +++G+ + +++LT A+  +Y++   +++A ++F    +  K+   +N
Sbjct: 361 GAFDLGKRLYHQYIENGVFNQNTILTAAVMDMYAKCGSIDSALEIFRRVGKNMKTGFVFN 420

Query: 382 AMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHE-LVKS 440
           +MIAG  Q+GL E AI++F+E+ ++ + P+ VT   +L AC   G I  GK + E +  +
Sbjct: 421 SMIAGLAQHGLGETAITVFRELISTGLKPDEVTFVGVLCACGHSGLIEEGKKLFESMFNA 480

Query: 441 RNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSE-VTWNTMISGYGLHGH 493
              +  +     ++D+  + G + EA +L   M  ++  V W  ++S    HG+
Sbjct: 481 YGIKPQMEHYGCMVDLLGRYGCLEEAYDLVQKMPFEANSVIWRALLSACRTHGN 534


>gi|92429671|gb|ABE77204.1| unknown [Sorghum bicolor]
          Length = 795

 Score =  456 bits (1172), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 256/728 (35%), Positives = 398/728 (54%), Gaps = 16/728 (2%)

Query: 64  FFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCD 123
           F  + +P  FL NV+IRGF++ ++P  ++  Y  +    A  PD FT+  VL     CC 
Sbjct: 77  FAGVTRPGAFLHNVMIRGFADADLPLDALAAYRAMLDAGA-RPDRFTFPVVLK----CCA 131

Query: 124 RSIGVLLHGHA-----IVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWN 178
           R+ G L  G A     I  G G+D++   +LV LY K   V  A +VFD MP +D V WN
Sbjct: 132 RA-GALGEGRAAHAAVIKLGLGADVYTANSLVALYAKLGLVGDAERVFDGMPARDIVSWN 190

Query: 179 SMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLK 238
           +M+ G + N     ++  F +M        DS  V A L A      L LG EI    ++
Sbjct: 191 TMVDGYVSNGMGALALACFREMNDALQVGHDSVGVIAALAACCLESALALGREIHGYAIR 250

Query: 239 LGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRL 298
            G    V V T LV  Y KCG V  AE +F  +    +++ N MI GY  N +   +   
Sbjct: 251 HGLEQDVKVGTSLVDMYCKCGNVFFAENVFAKMPLRTVVTWNCMIGGYALNERPVDAFDC 310

Query: 299 FRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSR 358
           F Q+     +V   T + L+              +H++ ++   + +  + TAL  +Y +
Sbjct: 311 FMQMRVDGFQVEVVTAINLLTACAQTESSLFGRSVHAYVVRRHFLPHVVLETALLEMYGK 370

Query: 359 LNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSI 418
           + ++E++ K+F + ++K+L SWN MIA Y    + +EAI+LF E+    + P+  T++++
Sbjct: 371 VGKVESSEKIFGQITDKTLVSWNNMIAAYMYMEMYQEAIALFLELLNQPLYPDYFTMTTV 430

Query: 419 LSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSE 478
           + A   LG+I   K +H  +    +  +  +  A++ MYA+CGNIV +RE+FD M  K  
Sbjct: 431 VPAFVLLGSIRQCKQMHSYIVKLGYGDSTLIMNAVMHMYARCGNIVASREIFDKMPGKDV 490

Query: 479 VTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQS 538
           ++WNT+I GY +HG G  AL++F EM  SG+ P+  TF+SVL ACS +GL  EG + F S
Sbjct: 491 ISWNTIIIGYAIHGQGKIALEMFDEMKCSGMEPNESTFVSVLTACSVSGLEAEGWKEFNS 550

Query: 539 MIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTN 598
           M  ++G  P  EHY CM D+LGRAG+L + L FI+ + + P   +WG+LL A     D +
Sbjct: 551 MQQEYGMIPQIEHYGCMTDLLGRAGELREVLRFIENMPIAPTSRIWGSLLTASRNKNDID 610

Query: 599 LARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVG 658
           +A  A+E++F+L+  N G +V+LS++Y+    +     +R ++K++ L +    +L+E+ 
Sbjct: 611 IAEYAAERIFQLEHNNTGCYVVLSSMYADAGRWEDVERIRSLMKEKGLRRTEARSLVELN 670

Query: 659 GTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEE--EEKELMMKVH 716
                F +GD  HPQS  I+   + L+   R  G   ++ + L D +       ++   H
Sbjct: 671 NKECSFVNGDMSHPQSEKIHEFSDILS---RNIGEDLDSSSNLRDSDPFASSTTVLPNKH 727

Query: 717 SEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGG 776
           S +LA+AFGLI++E G+ + + KN+RVC  CH A K ISK +GR IVV D   +H F  G
Sbjct: 728 SVRLAVAFGLISSEAGSPVLVKKNVRVCNHCHHALKLISKYSGRKIVVGDTKIYHIFSDG 787

Query: 777 VCSCGDYW 784
            C CGDYW
Sbjct: 788 SCCCGDYW 795



 Score =  180 bits (457), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 126/463 (27%), Positives = 219/463 (47%), Gaps = 9/463 (1%)

Query: 29  HAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNEMP 88
           HA +I  G   D+ T   L    +       A  +F  +P  D+  +N ++ G+ +N M 
Sbjct: 143 HAAVIKLGLGADVYTANSLVALYAKLGLVGDAERVFDGMPARDIVSWNTMVDGYVSNGMG 202

Query: 89  KSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRS---IGVLLHGHAIVSGYGSDLFV 145
             ++  +  +     +  D+     V++A +ACC  S   +G  +HG+AI  G   D+ V
Sbjct: 203 ALALACFREMNDALQVGHDSVG---VIAALAACCLESALALGREIHGYAIRHGLEQDVKV 259

Query: 146 GAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGG 205
           G +LVD+Y K   V  A  VF KMP +  V WN MI G   N    D+   F  M R  G
Sbjct: 260 GTSLVDMYCKCGNVFFAENVFAKMPLRTVVTWNCMIGGYALNERPVDAFDCFMQM-RVDG 318

Query: 206 TWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAE 265
             ++  +   +L A A+ +    G  +    ++  F  HV + T L+  Y K G+VE +E
Sbjct: 319 FQVEVVTAINLLTACAQTESSLFGRSVHAYVVRRHFLPHVVLETALLEMYGKVGKVESSE 378

Query: 266 LLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFG 325
            +F  I    L+S N MI+ Y      + ++ LF +LL      +  T+  ++P F   G
Sbjct: 379 KIFGQITDKTLVSWNNMIAAYMYMEMYQEAIALFLELLNQPLYPDYFTMTTVVPAFVLLG 438

Query: 326 HLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIA 385
            +     +HS+ +K G   ++ ++ A+  +Y+R   + A+R++FD+   K + SWN +I 
Sbjct: 439 SIRQCKQMHSYIVKLGYGDSTLIMNAVMHMYARCGNIVASREIFDKMPGKDVISWNTIII 498

Query: 386 GYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLG-KWVHELVKSRNFE 444
           GY  +G  + A+ +F EM+ S + PN  T  S+L+AC+  G  + G K  + + +     
Sbjct: 499 GYAIHGQGKIALEMFDEMKCSGMEPNESTFVSVLTACSVSGLEAEGWKEFNSMQQEYGMI 558

Query: 445 SNIYVSTALIDMYAKCGNIVEARELFDLMS-HKSEVTWNTMIS 486
             I     + D+  + G + E     + M    +   W ++++
Sbjct: 559 PQIEHYGCMTDLLGRAGELREVLRFIENMPIAPTSRIWGSLLT 601



 Score =  145 bits (366), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 93/335 (27%), Positives = 162/335 (48%), Gaps = 3/335 (0%)

Query: 259 GEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLI 318
           G ++ A   F  + RP     N MI G+        +L  +R +L +  R +  T   ++
Sbjct: 68  GRMDEAADAFAGVTRPGAFLHNVMIRGFADADLPLDALAAYRAMLDAGARPDRFTFPVVL 127

Query: 319 PVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLA 378
                 G L      H+  +K G+ ++     +L  +Y++L  +  A ++FD    + + 
Sbjct: 128 KCCARAGALGEGRAAHAAVIKLGLGADVYTANSLVALYAKLGLVGDAERVFDGMPARDIV 187

Query: 379 SWNAMIAGYTQNGLTEEAISLFQEMQ-ASKVAPNPVTVSSILSACAQLGAISLGKWVHEL 437
           SWN M+ GY  NG+   A++ F+EM  A +V  + V V + L+AC    A++LG+ +H  
Sbjct: 188 SWNTMVDGYVSNGMGALALACFREMNDALQVGHDSVGVIAALAACCLESALALGREIHGY 247

Query: 438 VKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEA 497
                 E ++ V T+L+DMY KCGN+  A  +F  M  ++ VTWN MI GY L+   ++A
Sbjct: 248 AIRHGLEQDVKVGTSLVDMYCKCGNVFFAENVFAKMPLRTVVTWNCMIGGYALNERPVDA 307

Query: 498 LQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVD 557
              F +M   G +   VT +++L AC+       G  +   ++  H F P       +++
Sbjct: 308 FDCFMQMRVDGFQVEVVTAINLLTACAQTESSLFGRSVHAYVVRRH-FLPHVVLETALLE 366

Query: 558 ILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACM 592
           + G+ G++E + E I G   +     W  ++ A M
Sbjct: 367 MYGKVGKVESS-EKIFGQITDKTLVSWNNMIAAYM 400



 Score = 45.8 bits (107), Expect = 0.080,   Method: Compositional matrix adjust.
 Identities = 31/101 (30%), Positives = 46/101 (45%)

Query: 440 SRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQ 499
           SR   S+     +LI  +   G + EA + F  ++       N MI G+      L+AL 
Sbjct: 47  SRPISSSGSRPKSLILSHVAAGRMDEAADAFAGVTRPGAFLHNVMIRGFADADLPLDALA 106

Query: 500 LFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMI 540
            +  ML +G RP   TF  VL  C+ AG + EG     ++I
Sbjct: 107 AYRAMLDAGARPDRFTFPVVLKCCARAGALGEGRAAHAAVI 147


>gi|15223802|ref|NP_173449.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806503|sp|Q9LNU6.2|PPR53_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g20230
 gi|332191832|gb|AEE29953.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 760

 Score =  455 bits (1171), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 242/724 (33%), Positives = 390/724 (53%), Gaps = 71/724 (9%)

Query: 131 HGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCF 190
           H   + SG  +D ++ A L+  Y  ++    A  V   +P+     ++S+I  L K   F
Sbjct: 38  HARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLF 97

Query: 191 QDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTG 250
             SI VF  M  +G    DS  +  +    AE+   ++G +I C+    G     +V   
Sbjct: 98  TQSIGVFSRMFSHG-LIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGS 156

Query: 251 LVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVN 310
           +   Y +CG +  A  +F  +   D+++C+A++  Y   G  E  +R+  ++ +S    N
Sbjct: 157 MFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEAN 216

Query: 311 SSTIVGLIPVFYPFGH-----------------------------------LHLTNCIHS 335
             +  G++  F   G+                                   L++   IH 
Sbjct: 217 IVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHG 276

Query: 336 FCLKSGIVSNSSVLTALSTVYSR----------LNEMEAAR------------------- 366
           + +K G++ +  V++A+  +Y +           N+ E                      
Sbjct: 277 YVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDK 336

Query: 367 -----KLFDESS-EKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILS 420
                +LF E + E ++ SW ++IAG  QNG   EA+ LF+EMQ + V PN VT+ S+L 
Sbjct: 337 ALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLP 396

Query: 421 ACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVT 480
           AC  + A+  G+  H      +   N++V +ALIDMYAKCG I  ++ +F++M  K+ V 
Sbjct: 397 ACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVC 456

Query: 481 WNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMI 540
           WN++++G+ +HG   E + +F  ++ + ++P  ++F S+L AC   GL  EG + F+ M 
Sbjct: 457 WNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMS 516

Query: 541 HDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLA 600
            ++G KP  EHY+CMV++LGRAG+L++A + IK +  EP   VWGALL +C +  + +LA
Sbjct: 517 EEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLA 576

Query: 601 RVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGT 660
            +A+EKLF L+PEN G +VLLSNIY+A+  + +  ++R  ++   L K PGC+ I+V   
Sbjct: 577 EIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKNR 636

Query: 661 PHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKL 720
            +   +GD+ HPQ   I   +++++ +MR++G +     ALHDVEE+E+E M+  HSEKL
Sbjct: 637 VYTLLAGDKSHPQIDQITEKMDEISKEMRKSGHRPNLDFALHDVEEQEQEQMLWGHSEKL 696

Query: 721 AIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSC 780
           A+ FGL+ T  GT +++IKNLR+C DCH   KFIS   GR I +RD NRFHHFK G+CSC
Sbjct: 697 AVVFGLLNTPDGTPLQVIKNLRICGDCHAVIKFISSYAGREIFIRDTNRFHHFKDGICSC 756

Query: 781 GDYW 784
           GD+W
Sbjct: 757 GDFW 760



 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 134/611 (21%), Positives = 262/611 (42%), Gaps = 79/611 (12%)

Query: 4   KTPQSRNLFLSLLKGAKTQS--QLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYAR 61
           K PQS   FL       + S  + TQ HA+I+  G QND     KL    S++     A 
Sbjct: 11  KIPQSIVGFLESSSYHWSSSLSKTTQAHARILKSGAQNDGYISAKLIASYSNYNCFNDAD 70

Query: 62  ALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASAC 121
            +  SIP P ++ F+ +I   +  ++   SI  ++ +  +  L PD+     +    +  
Sbjct: 71  LVLQSIPDPTIYSFSSLIYALTKAKLFTQSIGVFSRMFSH-GLIPDSHVLPNLFKVCAEL 129

Query: 122 CDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMI 181
               +G  +H  + VSG   D FV  ++  +Y +   +  ARKVFD+M +KD V  ++++
Sbjct: 130 SAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALL 189

Query: 182 SGLMKNCCFQDSIWVFGDMVRNG----------------------------------GTW 207
               +  C ++ + +  +M  +G                                  G  
Sbjct: 190 CAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFC 249

Query: 208 LDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEV------ 261
            D  +V++VLP+V + + L +G  I    +K G      V++ ++  Y K G V      
Sbjct: 250 PDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISL 309

Query: 262 -----------------------------ERAELLFRDIVRPDLISCNAMISGYTCNGKT 292
                                        E  EL     +  +++S  ++I+G   NGK 
Sbjct: 310 FNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKD 369

Query: 293 ESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTAL 352
             +L LFR++  +  + N  TI  ++P       L      H F ++  ++ N  V +AL
Sbjct: 370 IEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSAL 429

Query: 353 STVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNP 412
             +Y++   +  ++ +F+    K+L  WN+++ G++ +G  +E +S+F+ +  +++ P+ 
Sbjct: 430 IDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDF 489

Query: 413 VTVSSILSACAQLGAISLG-KWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFD 471
           ++ +S+LSAC Q+G    G K+   + +    +  +   + ++++  + G + EA +L  
Sbjct: 490 ISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIK 549

Query: 472 LMSHKSE-VTWNTMISGYGLHGHGLEALQLFSEMLH--SGIRPSGVTFLSVLYACSHAGL 528
            M  + +   W  +++   L  + ++  ++ +E L       P     LS +YA    G+
Sbjct: 550 EMPFEPDSCVWGALLNSCRLQ-NNVDLAEIAAEKLFHLEPENPGTYVLLSNIYAAK--GM 606

Query: 529 VREGDEIFQSM 539
             E D I   M
Sbjct: 607 WTEVDSIRNKM 617


>gi|302797174|ref|XP_002980348.1| hypothetical protein SELMODRAFT_112174 [Selaginella moellendorffii]
 gi|300151964|gb|EFJ18608.1| hypothetical protein SELMODRAFT_112174 [Selaginella moellendorffii]
          Length = 801

 Score =  455 bits (1171), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 265/786 (33%), Positives = 435/786 (55%), Gaps = 40/786 (5%)

Query: 27  QTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIP---KPDLFLFNVIIRGFS 83
           + H+QI    F+ +      L    S   +   A+  F  +P   K D+  +N +I  F 
Sbjct: 28  RIHSQISDRDFEENSVLGNALISMYSKCGSLIDAKQAFDRLPRASKRDVVTWNAMISAFL 87

Query: 84  NNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVL-----LHGHAIVSG 138
            N   + ++  +  +  + A  P++ T+  VL +   C +  +  L     +HG  + +G
Sbjct: 88  RNGSAREALQLFRDMDHDGAPPPNSVTFVSVLDS---CVEAGLLSLEDVRAIHGRIVGAG 144

Query: 139 YGSDLFVGAALVDLYFKFSWVKSARKVF----DKMPEKDTVLWNSMISGLMKNCCFQDSI 194
              + FV  ALVD Y K   +  A +VF    D+ P    V  ++MIS   +N   Q+S+
Sbjct: 145 IEREAFVRTALVDSYGKLGSLDDAWEVFLRKSDEEPSTSLVTCSAMISACWQNGWPQESL 204

Query: 195 WVFGDMVRNGG--------TWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVY 246
            +F  M   G         + L++ S+  V  A A V E       Q + +     D+V 
Sbjct: 205 RLFYAMNLEGTKPSGVTLVSVLNACSMLPVGSATAFVLE-------QAMEVVSATRDNV- 256

Query: 247 VLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASA 306
           + T L++ Y++  ++ RA   F  I  PD++S NAM + Y  + +   +L LF ++L   
Sbjct: 257 LGTTLLTTYARSNDLSRARATFDAIQSPDVVSWNAMAAAYLQHHRPREALVLFERMLLEG 316

Query: 307 ERVNSSTIVGLI---PVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEME 363
            R + +T +  +     + P     +   I S   ++G+  +++V  A   +Y++   + 
Sbjct: 317 VRPSVATFITALTACAAYPPQTASAIGKRIQSLLEEAGLEGDTAVANATLNMYAKCGSLA 376

Query: 364 AARKLFDESS--EKSLASWNAMIAGYTQNGLTEEAISLFQEMQASK-VAPNPVTVSSILS 420
            AR +F+  S   +   +WN+M+A Y  +GL +EA  LFQ M+A K V PN VT  ++L 
Sbjct: 377 DARAVFERISPTRRDCITWNSMLAAYGHHGLGKEAFELFQAMEAEKLVKPNKVTFVAVLD 436

Query: 421 ACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSE-- 478
           A     +I+ G+ +H  V S  FES+  +  AL++MYAKCG++ +A+ +FD  S   E  
Sbjct: 437 ASTSRTSIAQGREIHARVVSNGFESDTVIQNALLNMYAKCGSLDDAQAIFDKSSSNQEDV 496

Query: 479 VTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQS 538
           + W ++++GY  +G    AL+LF  M   G+RP+ +TF+S L AC+H G + +G E+   
Sbjct: 497 IAWTSLVAGYAQYGQAERALKLFWTMQQQGVRPNHITFISALTACNHGGKLEQGCELLSG 556

Query: 539 MIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTN 598
           M  DHG  P ++H++C+VD+LGR G+L++A + ++  + +     W ALL AC   K+  
Sbjct: 557 MTPDHGIVPASKHFSCIVDLLGRCGRLDEAEKLLERTS-QADVITWMALLDACKNSKELE 615

Query: 599 LARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVG 658
                +E++ +LDPE    +++L+++Y+A   + +AAT+R+ +  + +   PGC+ +EV 
Sbjct: 616 RGERCAERIMQLDPEVASSYIVLASMYAAAGRWNEAATIRKTMLDKGIRADPGCSAVEVN 675

Query: 659 GTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSE 718
              H F++GD+ HP+S  IY  LE+L+  ++ AG+  +T   LHDV +E KE ++  HSE
Sbjct: 676 QELHSFSAGDKSHPKSEEIYLELERLHWSIKAAGYVADTGLVLHDVSQEHKERLLMRHSE 735

Query: 719 KLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVC 778
           KLAIAFGL++T  G+ +R+IKNLRVC DCHTATK ISKVTGR I++RD++R+HHF  G C
Sbjct: 736 KLAIAFGLMSTPSGSPLRVIKNLRVCSDCHTATKLISKVTGRDILMRDSSRYHHFTSGTC 795

Query: 779 SCGDYW 784
           SCGDYW
Sbjct: 796 SCGDYW 801



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 144/508 (28%), Positives = 255/508 (50%), Gaps = 32/508 (6%)

Query: 106 PDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKV 165
           P+      +++A S   + + G  +H       +  +  +G AL+ +Y K   +  A++ 
Sbjct: 5   PNCHALIALVNACSCLGNLAAGRRIHSQISDRDFEENSVLGNALISMYSKCGSLIDAKQA 64

Query: 166 FDKMP---EKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAE 222
           FD++P   ++D V WN+MIS  ++N   ++++ +F DM  +G    +S +  +VL +  E
Sbjct: 65  FDRLPRASKRDVVTWNAMISAFLRNGSAREALQLFRDMDHDGAPPPNSVTFVSVLDSCVE 124

Query: 223 VQELRLGMEIQCLGLKL---GFHDHVYVLTGLVSFYSKCGEVERA-ELLFR---DIVRPD 275
              L L  +++ +  ++   G     +V T LV  Y K G ++ A E+  R   +     
Sbjct: 125 AGLLSL-EDVRAIHGRIVGAGIEREAFVRTALVDSYGKLGSLDDAWEVFLRKSDEEPSTS 183

Query: 276 LISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPV--FYPFGHLHLTNCI 333
           L++C+AMIS    NG  + SLRLF  +     + +  T+V ++      P G        
Sbjct: 184 LVTCSAMISACWQNGWPQESLRLFYAMNLEGTKPSGVTLVSVLNACSMLPVGS------A 237

Query: 334 HSFCLKSGI----VSNSSVL-TALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYT 388
            +F L+  +     +  +VL T L T Y+R N++  AR  FD      + SWNAM A Y 
Sbjct: 238 TAFVLEQAMEVVSATRDNVLGTTLLTTYARSNDLSRARATFDAIQSPDVVSWNAMAAAYL 297

Query: 389 QNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQL---GAISLGKWVHELVKSRNFES 445
           Q+    EA+ LF+ M    V P+  T  + L+ACA      A ++GK +  L++    E 
Sbjct: 298 QHHRPREALVLFERMLLEGVRPSVATFITALTACAAYPPQTASAIGKRIQSLLEEAGLEG 357

Query: 446 NIYVSTALIDMYAKCGNIVEARELFDLMS--HKSEVTWNTMISGYGLHGHGLEALQLFSE 503
           +  V+ A ++MYAKCG++ +AR +F+ +S   +  +TWN+M++ YG HG G EA +LF  
Sbjct: 358 DTAVANATLNMYAKCGSLADARAVFERISPTRRDCITWNSMLAAYGHHGLGKEAFELFQA 417

Query: 504 M-LHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRA 562
           M     ++P+ VTF++VL A +    + +G EI   ++ + GF+        ++++  + 
Sbjct: 418 MEAEKLVKPNKVTFVAVLDASTSRTSIAQGREIHARVVSN-GFESDTVIQNALLNMYAKC 476

Query: 563 GQLEKALE-FIKGLAVEPGPAVWGALLG 589
           G L+ A   F K  + +     W +L+ 
Sbjct: 477 GSLDDAQAIFDKSSSNQEDVIAWTSLVA 504



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 78/227 (34%), Positives = 119/227 (52%), Gaps = 10/227 (4%)

Query: 308 RVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARK 367
           R N   ++ L+      G+L     IHS         NS +  AL ++YS+   +  A++
Sbjct: 4   RPNCHALIALVNACSCLGNLAAGRRIHSQISDRDFEENSVLGNALISMYSKCGSLIDAKQ 63

Query: 368 LFD---ESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKV-APNPVTVSSILSACA 423
            FD    +S++ + +WNAMI+ + +NG   EA+ LF++M       PN VT  S+L +C 
Sbjct: 64  AFDRLPRASKRDVVTWNAMISAFLRNGSAREALQLFRDMDHDGAPPPNSVTFVSVLDSCV 123

Query: 424 QLGAISLG--KWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELF----DLMSHKS 477
           + G +SL   + +H  +     E   +V TAL+D Y K G++ +A E+F    D     S
Sbjct: 124 EAGLLSLEDVRAIHGRIVGAGIEREAFVRTALVDSYGKLGSLDDAWEVFLRKSDEEPSTS 183

Query: 478 EVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACS 524
            VT + MIS    +G   E+L+LF  M   G +PSGVT +SVL ACS
Sbjct: 184 LVTCSAMISACWQNGWPQESLRLFYAMNLEGTKPSGVTLVSVLNACS 230



 Score =  115 bits (289), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 70/193 (36%), Positives = 110/193 (56%), Gaps = 8/193 (4%)

Query: 407 KVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEA 466
           +V PN   + ++++AC+ LG ++ G+ +H  +  R+FE N  +  ALI MY+KCG++++A
Sbjct: 2   EVRPNCHALIALVNACSCLGNLAAGRRIHSQISDRDFEENSVLGNALISMYSKCGSLIDA 61

Query: 467 RELFDLMSHKSE---VTWNTMISGYGLHGHGLEALQLFSEMLHSGI-RPSGVTFLSVLYA 522
           ++ FD +   S+   VTWN MIS +  +G   EALQLF +M H G   P+ VTF+SVL +
Sbjct: 62  KQAFDRLPRASKRDVVTWNAMISAFLRNGSAREALQLFRDMDHDGAPPPNSVTFVSVLDS 121

Query: 523 CSHAGLVREGD-EIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALE-FIKGLAVEPG 580
           C  AGL+   D       I   G +  A     +VD  G+ G L+ A E F++    EP 
Sbjct: 122 CVEAGLLSLEDVRAIHGRIVGAGIEREAFVRTALVDSYGKLGSLDDAWEVFLRKSDEEPS 181

Query: 581 PAV--WGALLGAC 591
            ++    A++ AC
Sbjct: 182 TSLVTCSAMISAC 194



 Score = 41.2 bits (95), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 38/187 (20%), Positives = 91/187 (48%), Gaps = 25/187 (13%)

Query: 12  FLSLLKGAKTQSQLTQ---THAQIIIHGFQNDLSTVTKLAHRLSDFKATC----YARALF 64
           F+++L  + +++ + Q    HA+++ +GF++D    T + + L +  A C     A+A+F
Sbjct: 431 FVAVLDASTSRTSIAQGREIHARVVSNGFESD----TVIQNALLNMYAKCGSLDDAQAIF 486

Query: 65  --FSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACC 122
              S  + D+  +  ++ G++     + ++  +  +++   + P++ T+   +SA +AC 
Sbjct: 487 DKSSSNQEDVIAWTSLVAGYAQYGQAERALKLFWTMQQQ-GVRPNHITF---ISALTAC- 541

Query: 123 DRSIGVLLHGHAIVSGYGSDLFVGAA------LVDLYFKFSWVKSARKVFDKMPEKDTVL 176
               G L  G  ++SG   D  +  A      +VDL  +   +  A K+ ++  + D + 
Sbjct: 542 -NHGGKLEQGCELLSGMTPDHGIVPASKHFSCIVDLLGRCGRLDEAEKLLERTSQADVIT 600

Query: 177 WNSMISG 183
           W +++  
Sbjct: 601 WMALLDA 607


>gi|225444173|ref|XP_002268853.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like [Vitis vinifera]
          Length = 853

 Score =  455 bits (1171), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 249/675 (36%), Positives = 383/675 (56%), Gaps = 2/675 (0%)

Query: 28  THAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNEM 87
            H +I   GF+ D+   + L    S+      AR LF  +P  D  L+NV++ G+  N  
Sbjct: 169 VHDKIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGD 228

Query: 88  PKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGA 147
             ++   +  +R+ T   P++ T++ VLS  ++    + G  LHG  + SG   D  V  
Sbjct: 229 WDNATGVFMEMRR-TETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVAN 287

Query: 148 ALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTW 207
            L+ +Y K   +  AR++FD MP+ D V WN MISG ++N    ++  +F +M+ +    
Sbjct: 288 TLLAMYAKCGHLFDARRLFDMMPKTDLVTWNGMISGYVQNGFMDEASCLFHEMI-SARMK 346

Query: 208 LDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELL 267
            DS + ++ LP ++E   LR G EI C  ++ G    V++ + L+  Y KC +VE A  +
Sbjct: 347 PDSITFSSFLPLLSEGATLRQGKEIHCYIIRNGVSLDVFLKSALIDIYFKCRDVEMARKI 406

Query: 268 FRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHL 327
           F      D++ C AMISGY  NG   ++L +FR LL    R NS T+  ++P       L
Sbjct: 407 FDQRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQERMRANSVTLASVLPACAGLAAL 466

Query: 328 HLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGY 387
            L   +H   LK+G   +  V +A+  +Y++   ++ A + F   S+K    WN+MI   
Sbjct: 467 TLGKELHGHILKNGHGGSCYVGSAIMDMYAKCGRLDLAHQTFIGISDKDAVCWNSMITSC 526

Query: 388 TQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNI 447
           +QNG  EEAI LF++M  +    + V++S+ LSACA L A+  GK +H  +    F S++
Sbjct: 527 SQNGKPEEAIDLFRQMGMAGTKYDCVSISAALSACANLPALHYGKEIHAFMMRGAFRSDL 586

Query: 448 YVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHS 507
           +  +ALIDMY+KCGN+  A  +FD M  K+EV+WN++I+ YG HG   ++L LF  ML  
Sbjct: 587 FAESALIDMYSKCGNLDLACRVFDTMEEKNEVSWNSIIAAYGNHGRLKDSLNLFHGMLGD 646

Query: 508 GIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEK 567
           GI+P  VTFL+++ AC HAG V EG   F+ M  + G     EHYACMVD+ GRAG+L +
Sbjct: 647 GIQPDHVTFLAIISACGHAGQVDEGIHYFRCMTEELGIMARMEHYACMVDLFGRAGRLNE 706

Query: 568 ALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSA 627
           A   I  +   P   VWG LLGAC +H +  LA VAS  LF+LDP+N GY+VLLSN+++ 
Sbjct: 707 AFGMINSMPFSPDAGVWGTLLGACRLHGNVELAEVASRNLFDLDPQNSGYYVLLSNVHAN 766

Query: 628 ERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGK 687
              +     +R ++K+R + K PGC+ I+V  T H+F + D+ HPQS+ IY +L+ L  +
Sbjct: 767 AGQWESVLKIRSLMKERGVQKVPGCSWIDVNNTTHMFVAADRSHPQSSQIYLLLKNLFLE 826

Query: 688 MREAGFQTETVTALH 702
           +R+ G+  +    +H
Sbjct: 827 LRKEGYVPQLYLPMH 841



 Score =  259 bits (662), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 166/568 (29%), Positives = 292/568 (51%), Gaps = 4/568 (0%)

Query: 23  SQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGF 82
           SQ  Q HAQ++++G   +    TKL        A   A+ +F+ +       +N +IRGF
Sbjct: 63  SQGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFYQLRLWCSEPWNWMIRGF 122

Query: 83  SNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSD 142
           +       ++ FY  +     L PD +T+ +V+ A       ++G ++H      G+  D
Sbjct: 123 TMMGQFDFALLFYFKMLGCGTL-PDKYTFPYVIKACGGLNSVALGRVVHDKIQFMGFELD 181

Query: 143 LFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVR 202
           +FVG++L+  Y +   +  AR +FD+MP KD VLWN M++G +KN  + ++  VF +M R
Sbjct: 182 VFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGDWDNATGVFMEM-R 240

Query: 203 NGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVE 262
              T  +S + A VL   A    +  G ++  L +  G      V   L++ Y+KCG + 
Sbjct: 241 RTETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANTLLAMYAKCGHLF 300

Query: 263 RAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFY 322
            A  LF  + + DL++ N MISGY  NG  + +  LF +++++  + +S T    +P+  
Sbjct: 301 DARRLFDMMPKTDLVTWNGMISGYVQNGFMDEASCLFHEMISARMKPDSITFSSFLPLLS 360

Query: 323 PFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNA 382
               L     IH + +++G+  +  + +AL  +Y +  ++E ARK+FD+ +   +    A
Sbjct: 361 EGATLRQGKEIHCYIIRNGVSLDVFLKSALIDIYFKCRDVEMARKIFDQRTPVDIVVCTA 420

Query: 383 MIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRN 442
           MI+GY  NG+   A+ +F+ +   ++  N VT++S+L ACA L A++LGK +H  +    
Sbjct: 421 MISGYVLNGMNNNALEIFRWLLQERMRANSVTLASVLPACAGLAALTLGKELHGHILKNG 480

Query: 443 FESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFS 502
              + YV +A++DMYAKCG +  A + F  +S K  V WN+MI+    +G   EA+ LF 
Sbjct: 481 HGGSCYVGSAIMDMYAKCGRLDLAHQTFIGISDKDAVCWNSMITSCSQNGKPEEAIDLFR 540

Query: 503 EMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRA 562
           +M  +G +   V+  + L AC++   +  G EI   M+    F+      + ++D+  + 
Sbjct: 541 QMGMAGTKYDCVSISAALSACANLPALHYGKEIHAFMMRG-AFRSDLFAESALIDMYSKC 599

Query: 563 GQLEKALEFIKGLAVEPGPAVWGALLGA 590
           G L+ A      +  E     W +++ A
Sbjct: 600 GNLDLACRVFDTME-EKNEVSWNSIIAA 626



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 130/482 (26%), Positives = 236/482 (48%), Gaps = 8/482 (1%)

Query: 114 VLSAASACCDRS---IGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMP 170
           ++S    C D S    G   H   +V+G G +  +G  L+ +Y        A+ +F ++ 
Sbjct: 49  LVSILQTCTDPSGLSQGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFYQLR 108

Query: 171 EKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGM 230
              +  WN MI G      F  ++  +  M+   GT  D  +   V+ A   +  + LG 
Sbjct: 109 LWCSEPWNWMIRGFTMMGQFDFALLFYFKML-GCGTLPDKYTFPYVIKACGGLNSVALGR 167

Query: 231 EIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNG 290
            +      +GF   V+V + L+ FYS+ G +  A  LF  +   D +  N M++GY  NG
Sbjct: 168 VVHDKIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNG 227

Query: 291 KTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLT 350
             +++  +F ++  +    NS T   ++ V      ++  + +H   + SG+  +S V  
Sbjct: 228 DWDNATGVFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVAN 287

Query: 351 ALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAP 410
            L  +Y++   +  AR+LFD   +  L +WN MI+GY QNG  +EA  LF EM ++++ P
Sbjct: 288 TLLAMYAKCGHLFDARRLFDMMPKTDLVTWNGMISGYVQNGFMDEASCLFHEMISARMKP 347

Query: 411 NPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELF 470
           + +T SS L   ++   +  GK +H  +       ++++ +ALID+Y KC ++  AR++F
Sbjct: 348 DSITFSSFLPLLSEGATLRQGKEIHCYIIRNGVSLDVFLKSALIDIYFKCRDVEMARKIF 407

Query: 471 DLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVR 530
           D  +    V    MISGY L+G    AL++F  +L   +R + VT  SVL AC+    + 
Sbjct: 408 DQRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQERMRANSVTLASVLPACAGLAALT 467

Query: 531 EGDEIFQSMIHD-HGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLG 589
            G E+   ++ + HG        + ++D+  + G+L+ A +   G++ +     W +++ 
Sbjct: 468 LGKELHGHILKNGHGGSCYVG--SAIMDMYAKCGRLDLAHQTFIGIS-DKDAVCWNSMIT 524

Query: 590 AC 591
           +C
Sbjct: 525 SC 526


>gi|357521373|ref|XP_003630975.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355524997|gb|AET05451.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 701

 Score =  455 bits (1171), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 234/587 (39%), Positives = 352/587 (59%), Gaps = 17/587 (2%)

Query: 215 AVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSK---CGEV-----ERAE- 265
           ++L A   ++  +L   +    ++LG    +Y+   L++ Y+K    G+V     +R E 
Sbjct: 115 SLLKASTLLKHHKLAHSLHACTVRLGLDSDLYIANALINTYAKFHNAGKVFDVFPKRGES 174

Query: 266 ------LLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAE-RVNSSTIVGLI 318
                  +F  +   D++S N +I+G+  NG    +L + R++  + + + +S T+  ++
Sbjct: 175 GIDCVKKVFDMMPVRDVVSWNTVIAGFAQNGMYVEALDMVREMGKNGKLKPDSFTLSSIL 234

Query: 319 PVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLA 378
           P+F     ++    IH + +++G   +  + ++L  +Y++ N +E + + F     K   
Sbjct: 235 PIFAEHVDVNKGKEIHGYAVRNGFDGDVFIGSSLIDMYAKCNRLECSLRAFYILPRKDAI 294

Query: 379 SWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELV 438
           SWN++IAG  QNG  +  +  F+ M    V P  V+ SS++ ACA L A+SLG+ +H  +
Sbjct: 295 SWNSIIAGCVQNGEFDRGLGFFRRMLKENVKPMAVSFSSVIPACAHLTALSLGRQLHGCI 354

Query: 439 KSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEAL 498
               F+ N +++++L+DMYAKCGNI  AR +FD +  +  V W  +I G  +HGH L+A+
Sbjct: 355 VRLGFDDNEFIASSLVDMYAKCGNIKMARYVFDRIDKRDMVAWTAIIMGCAMHGHALDAV 414

Query: 499 QLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDI 558
            LF  ML  G+RP  V F++VL ACSHAGLV EG   F SM  D G  P  EHYA + D+
Sbjct: 415 SLFENMLEDGVRPCYVAFMAVLTACSHAGLVDEGWRYFNSMERDFGIAPGLEHYAAVADL 474

Query: 559 LGRAGQLEKALEFIKGL-AVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGY 617
           LGRAG+LE+A +FI  +  V+P  +VW  LL AC  HK   LA    +KL  +D EN+G 
Sbjct: 475 LGRAGRLEEAYDFISNMRGVQPTGSVWSILLAACRAHKSVELAEKVLDKLLSVDSENMGA 534

Query: 618 HVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAI 677
           +VL+SNIYSA + +  AA +R  ++K+ L K P C+ IEVG   H F +GD+ HP    I
Sbjct: 535 YVLMSNIYSAAQRWKDAARLRIHMRKKGLKKTPACSWIEVGNQVHTFMAGDKSHPYYDKI 594

Query: 678 YAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRI 737
              L+ L  +M + G+  +T   LHDV+EE K  ++  HSE+LAIA+G+I+T  GT IR+
Sbjct: 595 NKALDVLLEQMEKEGYVIDTNQVLHDVDEELKRELLHNHSERLAIAYGIISTTAGTTIRV 654

Query: 738 IKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           IKN+RVC DCHTA KFI+K+ GR I VRD +RFHHFK G CSCGDYW
Sbjct: 655 IKNIRVCADCHTAIKFITKIVGREITVRDNSRFHHFKNGSCSCGDYW 701



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 103/412 (25%), Positives = 204/412 (49%), Gaps = 17/412 (4%)

Query: 78  IIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVS 137
           II+ ++++ +   S   +  +R + ++ P+   +  +L A++      +   LH   +  
Sbjct: 81  IIKCYTSHSLLHLSFSSFNSMR-SLSVPPNRHVFPSLLKASTLLKHHKLAHSLHACTVRL 139

Query: 138 GYGSDLFVGAALVDLYFKF---------------SWVKSARKVFDKMPEKDTVLWNSMIS 182
           G  SDL++  AL++ Y KF               S +   +KVFD MP +D V WN++I+
Sbjct: 140 GLDSDLYIANALINTYAKFHNAGKVFDVFPKRGESGIDCVKKVFDMMPVRDVVSWNTVIA 199

Query: 183 GLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFH 242
           G  +N  + +++ +  +M +NG    DS +++++LP  AE  ++  G EI    ++ GF 
Sbjct: 200 GFAQNGMYVEALDMVREMGKNGKLKPDSFTLSSILPIFAEHVDVNKGKEIHGYAVRNGFD 259

Query: 243 DHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQL 302
             V++ + L+  Y+KC  +E +   F  + R D IS N++I+G   NG+ +  L  FR++
Sbjct: 260 GDVFIGSSLIDMYAKCNRLECSLRAFYILPRKDAISWNSIIAGCVQNGEFDRGLGFFRRM 319

Query: 303 LASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEM 362
           L    +  + +   +IP       L L   +H   ++ G   N  + ++L  +Y++   +
Sbjct: 320 LKENVKPMAVSFSSVIPACAHLTALSLGRQLHGCIVRLGFDDNEFIASSLVDMYAKCGNI 379

Query: 363 EAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSAC 422
           + AR +FD   ++ + +W A+I G   +G   +A+SLF+ M    V P  V   ++L+AC
Sbjct: 380 KMARYVFDRIDKRDMVAWTAIIMGCAMHGHALDAVSLFENMLEDGVRPCYVAFMAVLTAC 439

Query: 423 AQLGAISLG-KWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLM 473
           +  G +  G ++ + + +       +    A+ D+  + G + EA +    M
Sbjct: 440 SHAGLVDEGWRYFNSMERDFGIAPGLEHYAAVADLLGRAGRLEEAYDFISNM 491



 Score =  155 bits (393), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 123/474 (25%), Positives = 216/474 (45%), Gaps = 61/474 (12%)

Query: 2   SMKTPQSRNLFLSLLKGA---KTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKAT- 57
           S+  P +R++F SLLK +   K        HA  +  G  +DL     L +  + F    
Sbjct: 103 SLSVPPNRHVFPSLLKASTLLKHHKLAHSLHACTVRLGLDSDLYIANALINTYAKFHNAG 162

Query: 58  ---------------CYARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNT 102
                          C  + +F  +P  D+  +N +I GF+ N M   ++     + KN 
Sbjct: 163 KVFDVFPKRGESGIDC-VKKVFDMMPVRDVVSWNTVIAGFAQNGMYVEALDMVREMGKNG 221

Query: 103 ALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSA 162
            L PD+FT S +L   +   D + G  +HG+A+ +G+  D+F+G++L+D+Y K + ++ +
Sbjct: 222 KLKPDSFTLSSILPIFAEHVDVNKGKEIHGYAVRNGFDGDVFIGSSLIDMYAKCNRLECS 281

Query: 163 RKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAE 222
            + F  +P KD + WNS+I+G ++N  F   +  F  M++     + + S ++V+PA A 
Sbjct: 282 LRAFYILPRKDAISWNSIIAGCVQNGEFDRGLGFFRRMLKENVKPM-AVSFSSVIPACAH 340

Query: 223 VQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAM 282
           +  L LG ++    ++LGF D+ ++ + LV  Y+KCG ++ A  +F  I + D+++  A+
Sbjct: 341 LTALSLGRQLHGCIVRLGFDDNEFIASSLVDMYAKCGNIKMARYVFDRIDKRDMVAWTAI 400

Query: 283 ISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGI 342
           I G   +G    ++ LF  +L            G+ P +  F  + LT C H+  +  G 
Sbjct: 401 IMGCAMHGHALDAVSLFENMLED----------GVRPCYVAFMAV-LTACSHAGLVDEG- 448

Query: 343 VSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQE 402
                        +   N ME      D      L  + A+     + G  EEA      
Sbjct: 449 -------------WRYFNSMER-----DFGIAPGLEHYAAVADLLGRAGRLEEAYDFISN 490

Query: 403 MQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFE--------SNIY 448
           M+   V P     S +L+AC    ++ L + V + + S + E        SNIY
Sbjct: 491 MRG--VQPTGSVWSILLAACRAHKSVELAEKVLDKLLSVDSENMGAYVLMSNIY 542


>gi|357116318|ref|XP_003559929.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Brachypodium distachyon]
          Length = 646

 Score =  455 bits (1170), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 229/588 (38%), Positives = 346/588 (58%), Gaps = 14/588 (2%)

Query: 211 TSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGE---------- 260
           TS+   L + A +    LG  +  L L+ G     +    L++ Y K             
Sbjct: 59  TSLPGALKSCAALGLRALGASLHALALRSGAFADRFAANALLNLYCKLPAPPSHSPEMDG 118

Query: 261 ----VERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVG 316
               +E    +F ++   D++S N ++ G   +G+   +L L R++     + +S T+  
Sbjct: 119 SAVVLESVRKVFDEMPEKDVVSWNTLVLGCAESGRHGEALGLVREMWRDGCKPDSFTLSS 178

Query: 317 LIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKS 376
           ++P+F     +     +H F  ++G   +  V ++L  +Y+     + + K+FD    + 
Sbjct: 179 VLPIFAEGADVRRGMELHGFATRNGFHDDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRD 238

Query: 377 LASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHE 436
              WN+M+AG  QNG  +EA+ LF+ M  S + P PVT SS++ AC  L ++ LGK +H 
Sbjct: 239 AILWNSMLAGCAQNGSVDEALGLFRRMLHSGIKPMPVTFSSLIPACGNLASLLLGKQLHA 298

Query: 437 LVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLE 496
            V    F+ N+++S++LIDMY KCGN+  AR +FD +     V+W  MI G+ LHG   E
Sbjct: 299 YVIRGGFDGNVFISSSLIDMYCKCGNVSIARRIFDRIQSPDIVSWTAMIMGHALHGPARE 358

Query: 497 ALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMV 556
           AL LF  M    ++P+ +TFL+VL ACSHAGLV +G + F SM   +G  P  EH+A + 
Sbjct: 359 ALVLFDRMELGNLKPNHITFLAVLTACSHAGLVDKGWKYFNSMSDHYGIVPSLEHHAALA 418

Query: 557 DILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVG 616
           D LGR G+LE+A  FI G+ ++P  +VW  LL AC +HK+T LA   ++K+F+L+P ++G
Sbjct: 419 DTLGRPGKLEEAYNFISGMKIKPTASVWSTLLRACKVHKNTVLAEEVAKKIFDLEPRSMG 478

Query: 617 YHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTA 676
            H++LSN YS+   + +AA +R+ ++K+ + K P C+ IEV    HVF + D+ HP    
Sbjct: 479 SHIILSNTYSSSGRWNEAAHLRKSMRKKGMQKEPACSWIEVKNKQHVFVAHDKSHPWYER 538

Query: 677 IYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIR 736
           I   L   + +M   G+   T     D+EEE+K  ++  HSEKLAI FG+I+T PGT IR
Sbjct: 539 IIDALNVFSEQMVRQGYVPNTDDVFQDIEEEQKNSVLCGHSEKLAIVFGIISTPPGTTIR 598

Query: 737 IIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           ++KNLRVC+DCHT TKFISK+ GR IV+RDANRFHHFK G+CSCGD+W
Sbjct: 599 VMKNLRVCVDCHTVTKFISKIVGREIVMRDANRFHHFKDGICSCGDFW 646



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 126/442 (28%), Positives = 219/442 (49%), Gaps = 20/442 (4%)

Query: 115 LSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSW--------------VK 160
           L + +A   R++G  LH  A+ SG  +D F   AL++LY K                 ++
Sbjct: 65  LKSCAALGLRALGASLHALALRSGAFADRFAANALLNLYCKLPAPPSHSPEMDGSAVVLE 124

Query: 161 SARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAV 220
           S RKVFD+MPEKD V WN+++ G  ++    +++ +  +M R+G    DS ++++VLP  
Sbjct: 125 SVRKVFDEMPEKDVVSWNTLVLGCAESGRHGEALGLVREMWRDGCK-PDSFTLSSVLPIF 183

Query: 221 AEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCN 280
           AE  ++R GME+     + GFHD V+V + L+  Y+ C   + +  +F ++   D I  N
Sbjct: 184 AEGADVRRGMELHGFATRNGFHDDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDAILWN 243

Query: 281 AMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKS 340
           +M++G   NG  + +L LFR++L S  +    T   LIP       L L   +H++ ++ 
Sbjct: 244 SMLAGCAQNGSVDEALGLFRRMLHSGIKPMPVTFSSLIPACGNLASLLLGKQLHAYVIRG 303

Query: 341 GIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLF 400
           G   N  + ++L  +Y +   +  AR++FD      + SW AMI G+  +G   EA+ LF
Sbjct: 304 GFDGNVFISSSLIDMYCKCGNVSIARRIFDRIQSPDIVSWTAMIMGHALHGPAREALVLF 363

Query: 401 QEMQASKVAPNPVTVSSILSACAQLGAISLG-KWVHELVKSRNFESNIYVSTALIDMYAK 459
             M+   + PN +T  ++L+AC+  G +  G K+ + +        ++    AL D   +
Sbjct: 364 DRMELGNLKPNHITFLAVLTACSHAGLVDKGWKYFNSMSDHYGIVPSLEHHAALADTLGR 423

Query: 460 CGNIVEARELFDLMSHKSEVT-WNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGV-TFL 517
            G + EA      M  K   + W+T++    +H + + A ++  ++     R  G    L
Sbjct: 424 PGKLEEAYNFISGMKIKPTASVWSTLLRACKVHKNTVLAEEVAKKIFDLEPRSMGSHIIL 483

Query: 518 SVLYACSHAGLVREGDEIFQSM 539
           S  Y+ S  G   E   + +SM
Sbjct: 484 SNTYSSS--GRWNEAAHLRKSM 503



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 108/419 (25%), Positives = 192/419 (45%), Gaps = 42/419 (10%)

Query: 61  RALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASA 120
           R +F  +P+ D+  +N ++ G + +     ++     + ++    PD+FT S VL   + 
Sbjct: 127 RKVFDEMPEKDVVSWNTLVLGCAESGRHGEALGLVREMWRD-GCKPDSFTLSSVLPIFAE 185

Query: 121 CCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSM 180
             D   G+ LHG A  +G+  D+FVG++L+D+Y   +    + KVFD +P +D +LWNSM
Sbjct: 186 GADVRRGMELHGFATRNGFHDDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDAILWNSM 245

Query: 181 ISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLG 240
           ++G  +N    +++ +F  M+ +G   +  T  ++++PA   +  L LG ++    ++ G
Sbjct: 246 LAGCAQNGSVDEALGLFRRMLHSGIKPMPVT-FSSLIPACGNLASLLLGKQLHAYVIRGG 304

Query: 241 FHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFR 300
           F  +V++ + L+  Y KCG V  A  +F  I  PD++S  AMI G+  +G    +L LF 
Sbjct: 305 FDGNVFISSSLIDMYCKCGNVSIARRIFDRIQSPDIVSWTAMIMGHALHGPAREALVLFD 364

Query: 301 QLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLN 360
           ++     + N  T + +           LT C H+  +  G         ++S  Y  + 
Sbjct: 365 RMELGNLKPNHITFLAV-----------LTACSHAGLVDKGW----KYFNSMSDHYGIVP 409

Query: 361 EMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILS 420
            +E    L D                  + G  EEA +    M   K+ P     S++L 
Sbjct: 410 SLEHHAALADT---------------LGRPGKLEEAYNFISGM---KIKPTASVWSTLLR 451

Query: 421 ACAQLGAISLGKWVHELV---KSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHK 476
           AC       L + V + +   + R+  S+I +S    + Y+  G   EA  L   M  K
Sbjct: 452 ACKVHKNTVLAEEVAKKIFDLEPRSMGSHIILS----NTYSSSGRWNEAAHLRKSMRKK 506



 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 63/231 (27%), Positives = 98/231 (42%), Gaps = 20/231 (8%)

Query: 379 SWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTV----SSILSACAQLGAISLGKWV 434
           SW   I      G    AI+LF  M+AS  A    +V       L +CA LG  +LG  +
Sbjct: 21  SWAHQIRVAASQGDFHHAIALFLRMRASDPAAACSSVLTSLPGALKSCAALGLRALGASL 80

Query: 435 HELVKSRNFESNIYVSTALIDMYAKC-----------GNIV---EARELFDLMSHKSEVT 480
           H L       ++ + + AL+++Y K            G+ V     R++FD M  K  V+
Sbjct: 81  HALALRSGAFADRFAANALLNLYCKLPAPPSHSPEMDGSAVVLESVRKVFDEMPEKDVVS 140

Query: 481 WNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMI 540
           WNT++ G    G   EAL L  EM   G +P   T  SVL   +    VR G E+     
Sbjct: 141 WNTLVLGCAESGRHGEALGLVREMWRDGCKPDSFTLSSVLPIFAEGADVRRGMEL-HGFA 199

Query: 541 HDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGAC 591
             +GF       + ++D+     + + +++    L V     +W ++L  C
Sbjct: 200 TRNGFHDDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDA-ILWNSMLAGC 249



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 39/157 (24%), Positives = 79/157 (50%), Gaps = 1/157 (0%)

Query: 27  QTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNE 86
           + H     +GF +D+   + L    ++   T Y+  +F ++P  D  L+N ++ G + N 
Sbjct: 194 ELHGFATRNGFHDDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDAILWNSMLAGCAQNG 253

Query: 87  MPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVG 146
               ++  +  +  ++ + P   T+S ++ A        +G  LH + I  G+  ++F+ 
Sbjct: 254 SVDEALGLFRRML-HSGIKPMPVTFSSLIPACGNLASLLLGKQLHAYVIRGGFDGNVFIS 312

Query: 147 AALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISG 183
           ++L+D+Y K   V  AR++FD++   D V W +MI G
Sbjct: 313 SSLIDMYCKCGNVSIARRIFDRIQSPDIVSWTAMIMG 349


>gi|449458990|ref|XP_004147229.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
           mitochondrial-like [Cucumis sativus]
          Length = 667

 Score =  455 bits (1170), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 248/627 (39%), Positives = 359/627 (57%), Gaps = 49/627 (7%)

Query: 159 VKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLP 218
           ++SAR VF+KM  + TV WN+M+SG  K                             V  
Sbjct: 89  LESARNVFEKMSVRTTVTWNTMLSGYTK-----------------------------VAG 119

Query: 219 AVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLIS 278
            V E  EL           K+   D V     LV +    G V+ A   F  +   D+ S
Sbjct: 120 KVKEAHEL---------FDKIPEPDSVSYNIMLVCYLRSYG-VKAALAFFNKMPVKDIAS 169

Query: 279 CNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIH-SFC 337
            N +ISG+  NG+ + +  LF  +       N  +   +I  +   G L     ++ +  
Sbjct: 170 WNTLISGFAQNGQMQKAFDLFSVM----PEKNGVSWSAMISGYVEHGDLEAAEELYKNVG 225

Query: 338 LKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAI 397
           +KS +V      TA+ T Y +  ++E A ++F   + K+L +WN+MIAGY +N   E+ +
Sbjct: 226 MKSVVVE-----TAMLTGYMKFGKVELAERIFQRMAVKNLVTWNSMIAGYVENCRAEDGL 280

Query: 398 SLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMY 457
            +F+ M  S+V PNP+++SS+L  C+ L A+ LG+ +H+LV       +    T+LI MY
Sbjct: 281 KVFKTMIESRVRPNPLSLSSVLLGCSNLSALPLGRQMHQLVSKSPLSKDTTACTSLISMY 340

Query: 458 AKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFL 517
            KCG++  A +LF  M  K  +TWN MISGY  HG G +AL LF +M +  ++P  +TF+
Sbjct: 341 CKCGDLDSAWKLFLEMPRKDVITWNAMISGYAQHGAGRKALHLFDKMRNGTMKPDWITFV 400

Query: 518 SVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAV 577
           +V+ AC+HAG V  G + F+SM  + G +    HY C++D+LGRAG+L++A+  IK +  
Sbjct: 401 AVILACNHAGFVDLGVQYFKSMKKEFGIEAKPVHYTCVIDLLGRAGRLDEAVSLIKEMPF 460

Query: 578 EPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATV 637
            P  A++G LLGAC IHK+ +LA  A+  L  LDP +   +V L+NIY+A   + Q A V
Sbjct: 461 TPHAAIYGTLLGACRIHKNLDLAEFAARNLLNLDPTSATGYVQLANIYAATNKWDQVAKV 520

Query: 638 RQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTET 697
           R+++K+  + K PG + IE+    H F S D+LHP+ T+I+  L +L+GKM+ AG+  + 
Sbjct: 521 RKMMKEHNVVKIPGYSWIEIKSVTHEFRSSDRLHPELTSIHKKLNELDGKMKLAGYVPDL 580

Query: 698 VTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKV 757
             ALHDVEEE KE ++  HSEKLAIAFGL+ T PGT IR+ KNLRVC DCH A KFIS +
Sbjct: 581 EFALHDVEEEHKEKLLLWHSEKLAIAFGLMKTAPGTPIRVFKNLRVCGDCHRAIKFISAI 640

Query: 758 TGRVIVVRDANRFHHFKGGVCSCGDYW 784
             R I+VRD  RFHHF+ G CSCGDYW
Sbjct: 641 EKREIIVRDTTRFHHFRNGFCSCGDYW 667



 Score =  152 bits (383), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 96/324 (29%), Positives = 172/324 (53%), Gaps = 14/324 (4%)

Query: 153 YFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMV-RNGGTWLDST 211
           Y +   VK+A   F+KMP KD   WN++ISG  +N   Q +  +F  M  +NG +W    
Sbjct: 146 YLRSYGVKAALAFFNKMPVKDIASWNTLISGFAQNGQMQKAFDLFSVMPEKNGVSW---- 201

Query: 212 SVAAVLPAVAEVQELRLGMEI-QCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRD 270
             +A++    E  +L    E+ + +G+K      V V T +++ Y K G+VE AE +F+ 
Sbjct: 202 --SAMISGYVEHGDLEAAEELYKNVGMK-----SVVVETAMLTGYMKFGKVELAERIFQR 254

Query: 271 IVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLT 330
           +   +L++ N+MI+GY  N + E  L++F+ ++ S  R N  ++  ++        L L 
Sbjct: 255 MAVKNLVTWNSMIAGYVENCRAEDGLKVFKTMIESRVRPNPLSLSSVLLGCSNLSALPLG 314

Query: 331 NCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQN 390
             +H    KS +  +++  T+L ++Y +  ++++A KLF E   K + +WNAMI+GY Q+
Sbjct: 315 RQMHQLVSKSPLSKDTTACTSLISMYCKCGDLDSAWKLFLEMPRKDVITWNAMISGYAQH 374

Query: 391 GLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLG-KWVHELVKSRNFESNIYV 449
           G   +A+ LF +M+   + P+ +T  +++ AC   G + LG ++   + K    E+    
Sbjct: 375 GAGRKALHLFDKMRNGTMKPDWITFVAVILACNHAGFVDLGVQYFKSMKKEFGIEAKPVH 434

Query: 450 STALIDMYAKCGNIVEARELFDLM 473
            T +ID+  + G + EA  L   M
Sbjct: 435 YTCVIDLLGRAGRLDEAVSLIKEM 458



 Score =  107 bits (266), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 81/270 (30%), Positives = 132/270 (48%), Gaps = 20/270 (7%)

Query: 58  CYAR--------ALFFSIPKPDLFLFNVIIRGFSNN-EMPKSSICFYTHLRKNTALTPDN 108
           CY R        A F  +P  D+  +N +I GF+ N +M K+   F     KN       
Sbjct: 145 CYLRSYGVKAALAFFNKMPVKDIASWNTLISGFAQNGQMQKAFDLFSVMPEKN------G 198

Query: 109 FTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDK 168
            ++S ++S      D      L+ +    G  S + V  A++  Y KF  V+ A ++F +
Sbjct: 199 VSWSAMISGYVEHGDLEAAEELYKNV---GMKS-VVVETAMLTGYMKFGKVELAERIFQR 254

Query: 169 MPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRL 228
           M  K+ V WNSMI+G ++NC  +D + VF  M+ +     +  S+++VL   + +  L L
Sbjct: 255 MAVKNLVTWNSMIAGYVENCRAEDGLKVFKTMIES-RVRPNPLSLSSVLLGCSNLSALPL 313

Query: 229 GMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTC 288
           G ++  L  K          T L+S Y KCG+++ A  LF ++ R D+I+ NAMISGY  
Sbjct: 314 GRQMHQLVSKSPLSKDTTACTSLISMYCKCGDLDSAWKLFLEMPRKDVITWNAMISGYAQ 373

Query: 289 NGKTESSLRLFRQLLASAERVNSSTIVGLI 318
           +G    +L LF ++     + +  T V +I
Sbjct: 374 HGAGRKALHLFDKMRNGTMKPDWITFVAVI 403



 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 50/189 (26%), Positives = 88/189 (46%), Gaps = 27/189 (14%)

Query: 437 LVKSRNFESNIYVSTA--------LIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGY 488
           LV   N   N++V TA         I  + +  ++  AR +F+ MS ++ VTWNTM+SGY
Sbjct: 55  LVSPNNVTPNLHVDTASDVVSLNKTIASFVRACDLESARNVFEKMSVRTTVTWNTMLSGY 114

Query: 489 -GLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKP 547
             + G   EA +LF ++      P  V++  +L     +  V+     F  M      K 
Sbjct: 115 TKVAGKVKEAHELFDKI----PEPDSVSYNIMLVCYLRSYGVKAALAFFNKM----PVKD 166

Query: 548 LAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKL 607
           +A  +  ++    + GQ++KA +    +  + G + W A++   + H D      A+E+L
Sbjct: 167 IAS-WNTLISGFAQNGQMQKAFDLFSVMPEKNGVS-WSAMISGYVEHGDLE----AAEEL 220

Query: 608 FELDPENVG 616
           +    +NVG
Sbjct: 221 Y----KNVG 225


>gi|224141409|ref|XP_002324065.1| predicted protein [Populus trichocarpa]
 gi|222867067|gb|EEF04198.1| predicted protein [Populus trichocarpa]
          Length = 707

 Score =  454 bits (1169), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 238/661 (36%), Positives = 374/661 (56%), Gaps = 2/661 (0%)

Query: 126 IGVLLHGHAIVSGYGSD--LFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISG 183
           +G  +H H IV+   ++  +    +L++ Y K + V  A  +FD+MPE++ V W+++++G
Sbjct: 47  VGKTIHSHLIVTSRATENSIIEVNSLINFYAKVNQVSIAHNLFDRMPERNVVSWSALMTG 106

Query: 184 LMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHD 243
            + N      I +  DM+  G    +   +A  + +  +   +  G +   L LK GF  
Sbjct: 107 YLLNGFSLKVIRLLKDMISEGNVSPNEYILAIAISSCCDRGRVEEGRQCHGLLLKTGFSF 166

Query: 244 HVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLL 303
           H YV   LVS YSKC  V+ A  ++ ++   D+++ N+++S    NG     L + R ++
Sbjct: 167 HNYVRNALVSMYSKCSIVQDAMGVWNEVPVNDIVAYNSILSSLVENGYLREGLEVLRSMV 226

Query: 304 ASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEME 363
           + + + +  T V    +      L L   +H   L S +  ++ V +A+  +Y +  +  
Sbjct: 227 SESVKWDKVTFVNAFSLCASLKDLRLGLHVHGKMLTSDVECDAYVSSAIINMYGKCGKSL 286

Query: 364 AARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACA 423
            AR +FD    +++  W A++A   QNG  EEA++LF +M+   V  N  T + +L+ACA
Sbjct: 287 MARGVFDGLQSRNVVLWTAVMASCFQNGCFEEALNLFSKMEQENVKSNEFTYAVLLNACA 346

Query: 424 QLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNT 483
            L A   G  +H   +   F+ ++ V  ALI+MYAK G+I  A+++F  M H+  +TWN 
Sbjct: 347 GLSARRNGSLLHGHSEKSGFKHHVMVGNALINMYAKSGDIEAAKKVFSDMMHRDIITWNA 406

Query: 484 MISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDH 543
           MI G+  HG G +AL +F +ML +   P+ VTF  VL AC H GLV+EG      ++   
Sbjct: 407 MICGFSHHGLGKKALLVFQDMLAAEEHPNYVTFTGVLSACGHLGLVQEGFYYLHHLMKQF 466

Query: 544 GFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVA 603
           G +P  EHY C+V +L + GQL +A  F++   V+     W  LL AC +H++  L R  
Sbjct: 467 GVQPGLEHYTCIVSLLSKTGQLNEARNFMRTAPVKWDVVAWRTLLNACHVHQNYGLGRWV 526

Query: 604 SEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHV 663
           +E + E+DP +VG + LLSNIY+ E+ +     VR++++ +K+ K PG + IE+G   H+
Sbjct: 527 AEFVLEMDPNDVGTYTLLSNIYAKEKRWDGVVKVRKLMRDKKIKKEPGVSWIEIGNVTHI 586

Query: 664 FTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIA 723
           FTS D  HP     Y  +++L   ++  G+  +    LHDVE+E+KE  +  HSEKLAIA
Sbjct: 587 FTSEDNKHPDYGQTYQKVKELLAMIKPLGYTPDIGAVLHDVEDEQKEYYLSYHSEKLAIA 646

Query: 724 FGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDY 783
           +GL+       I +IKNLR+C DCH+A + ISKVT RVIVVRDANRFHHF+ G CSC DY
Sbjct: 647 YGLLKLPSEASILVIKNLRICDDCHSAVRLISKVTNRVIVVRDANRFHHFRDGRCSCLDY 706

Query: 784 W 784
           W
Sbjct: 707 W 707



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 109/464 (23%), Positives = 201/464 (43%), Gaps = 49/464 (10%)

Query: 27  QTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNE 86
           Q H  ++  GF         L    S       A  ++  +P  D+  +N I+     N 
Sbjct: 154 QCHGLLLKTGFSFHNYVRNALVSMYSKCSIVQDAMGVWNEVPVNDIVAYNSILSSLVENG 213

Query: 87  MPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVG 146
             +  +     +  + ++  D  T+    S  ++  D  +G+ +HG  + S    D +V 
Sbjct: 214 YLREGLEVLRSM-VSESVKWDKVTFVNAFSLCASLKDLRLGLHVHGKMLTSDVECDAYVS 272

Query: 147 AALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGT 206
           +A++++Y K      AR VFD +  ++ VLW ++++   +N CF++++ +F  M +    
Sbjct: 273 SAIINMYGKCGKSLMARGVFDGLQSRNVVLWTAVMASCFQNGCFEEALNLFSKMEQE-NV 331

Query: 207 WLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAEL 266
             +  + A +L A A +   R G  +     K GF  HV V   L++ Y+K G++E A+ 
Sbjct: 332 KSNEFTYAVLLNACAGLSARRNGSLLHGHSEKSGFKHHVMVGNALINMYAKSGDIEAAKK 391

Query: 267 LFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGH 326
           +F D++  D+I+ NAMI G++ +G  + +L +F+ +LA+ E  N  T  G   V    GH
Sbjct: 392 VFSDMMHRDIITWNAMICGFSHHGLGKKALLVFQDMLAAEEHPNYVTFTG---VLSACGH 448

Query: 327 LHLTN----CIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNA 382
           L L       +H    + G+       T + ++ S+  ++  AR                
Sbjct: 449 LGLVQEGFYYLHHLMKQFGVQPGLEHYTCIVSLLSKTGQLNEARNF-------------- 494

Query: 383 MIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRN 442
                               M+ + V  + V   ++L+AC       LG+WV E V   +
Sbjct: 495 --------------------MRTAPVKWDVVAWRTLLNACHVHQNYGLGRWVAEFVLEMD 534

Query: 443 FESNIYVSTALIDMYAK---CGNIVEARELFDLMSHKSE--VTW 481
             +++   T L ++YAK      +V+ R+L      K E  V+W
Sbjct: 535 -PNDVGTYTLLSNIYAKEKRWDGVVKVRKLMRDKKIKKEPGVSW 577


>gi|108707831|gb|ABF95626.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
 gi|125586055|gb|EAZ26719.1| hypothetical protein OsJ_10627 [Oryza sativa Japonica Group]
          Length = 798

 Score =  454 bits (1169), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 246/663 (37%), Positives = 387/663 (58%), Gaps = 35/663 (5%)

Query: 148 ALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGL-------------MKNCCFQDSI 194
           AL+  YF+     +A  +F +MP +D   +N++ISGL             + +  F  S+
Sbjct: 53  ALLAGYFRNRLPDAALGLFRRMPSRDLASYNALISGLSLRRQTLPDAAAALASIPFPPSV 112

Query: 195 WVFGDMVR---NGGTWLDSTSVAAVLPAVAEVQELRL--GM-------EIQCLGLKLGFH 242
             F  ++R     G   D+  +   +P    V    L  G+       E + L  ++   
Sbjct: 113 VSFTSLLRGYVRHGLLADAIRLFQQMPERNHVSYTVLLGGLLDAGRVNEARRLFDEMPDR 172

Query: 243 DHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQL 302
           D V   T ++S Y + G +  A  LF ++ + +++S  AMISGY  NG+   + +LF  +
Sbjct: 173 D-VVAWTAMLSGYCQAGRITEARALFDEMPKRNVVSWTAMISGYAQNGEVNLARKLFEVM 231

Query: 303 LASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEM 362
               E   ++ +VG I      GH+     + +   +  + + ++++      + +   +
Sbjct: 232 PERNEVSWTAMLVGYIQA----GHVEDAAELFNAMPEHPVAACNAMMVG----FGQRGMV 283

Query: 363 EAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSAC 422
           +AA+ +F++  E+   +W+AMI  Y QN    EA+S F+EM    V PN  +V SIL+ C
Sbjct: 284 DAAKTVFEKMCERDDGTWSAMIKAYEQNEFLMEALSTFREMLWRGVRPNYPSVISILTVC 343

Query: 423 AQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWN 482
           A L  +  G+ VH  +   +F+ +++  +ALI MY KCGN+ +A+ +F     K  V WN
Sbjct: 344 AALAVLDYGREVHAAMLRCSFDMDVFAVSALITMYIKCGNLDKAKRVFHTFEPKDIVMWN 403

Query: 483 TMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHD 542
           +MI+GY  HG G +AL +F +M  +G+ P G+T++  L ACS+ G V+EG EIF SM  +
Sbjct: 404 SMITGYAQHGLGEQALGIFHDMRLAGMSPDGITYIGALTACSYTGKVKEGREIFNSMTVN 463

Query: 543 HGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARV 602
              +P AEHY+CMVD+LGR+G +E+A + IK + VEP   +WGAL+GAC +H++  +A  
Sbjct: 464 SSIRPGAEHYSCMVDLLGRSGLVEEAFDLIKNMPVEPDAVIWGALMGACRMHRNAEIAEF 523

Query: 603 ASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPH 662
           A++KL EL+P N G +VLLS+IY++   +  A+ +R+ +  R L K+PGC+ IE     H
Sbjct: 524 AAKKLLELEPGNAGPYVLLSHIYTSVGRWEDASKMRKFISSRNLNKSPGCSWIEYDKRVH 583

Query: 663 VFTSGDQL-HPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLA 721
           +FTSGD L HP+  AI  +LEKL+G + E+G+  +    LHD++EE+K   ++ HSE+ A
Sbjct: 584 LFTSGDVLAHPEHAAILRILEKLDGLLMESGYSADGSFVLHDIDEEQKSHSLRYHSERQA 643

Query: 722 IAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCG 781
           +A+GL+    G  IR++KNLRVC DCH+A K I+K+T R I++RDANRFHHFK G CSC 
Sbjct: 644 VAYGLLKIPEGMPIRVMKNLRVCGDCHSAIKLIAKITSREIILRDANRFHHFKDGFCSCR 703

Query: 782 DYW 784
           DYW
Sbjct: 704 DYW 706



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 115/507 (22%), Positives = 222/507 (43%), Gaps = 50/507 (9%)

Query: 1   MSMKTPQSRNLFLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCY- 59
           M ++T  S N  L+       +++L      +       DL++   L   LS  + T   
Sbjct: 43  MPLRTTASYNALLA----GYFRNRLPDAALGLFRRMPSRDLASYNALISGLSLRRQTLPD 98

Query: 60  ARALFFSIP-KPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAA 118
           A A   SIP  P +  F  ++RG+  + +   +I  +  + +      ++ +Y+ +L   
Sbjct: 99  AAAALASIPFPPSVVSFTSLLRGYVRHGLLADAIRLFQQMPER-----NHVSYTVLL--- 150

Query: 119 SACCDRSIGVLLHGHAIVSGY-------GSDLFVGAALVDLYFKFSWVKSARKVFDKMPE 171
                   G LL    +             D+    A++  Y +   +  AR +FD+MP+
Sbjct: 151 --------GGLLDAGRVNEARRLFDEMPDRDVVAWTAMLSGYCQAGRITEARALFDEMPK 202

Query: 172 KDTVLWNSMISGLMKNCCFQDSIWVFGDMV-RNGGTWLDSTSVAAVLPAVAEVQELRLGM 230
           ++ V W +MISG  +N     +  +F  M  RN  +W       A+L     V  ++ G 
Sbjct: 203 RNVVSWTAMISGYAQNGEVNLARKLFEVMPERNEVSW------TAML-----VGYIQAGH 251

Query: 231 EIQCLGLKLGFHDH-VYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCN 289
                 L     +H V     ++  + + G V+ A+ +F  +   D  + +AMI  Y  N
Sbjct: 252 VEDAAELFNAMPEHPVAACNAMMVGFGQRGMVDAAKTVFEKMCERDDGTWSAMIKAYEQN 311

Query: 290 GKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVL 349
                +L  FR++L    R N  +++ ++ V      L     +H+  L+     +   +
Sbjct: 312 EFLMEALSTFREMLWRGVRPNYPSVISILTVCAALAVLDYGREVHAAMLRCSFDMDVFAV 371

Query: 350 TALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVA 409
           +AL T+Y +   ++ A+++F     K +  WN+MI GY Q+GL E+A+ +F +M+ + ++
Sbjct: 372 SALITMYIKCGNLDKAKRVFHTFEPKDIVMWNSMITGYAQHGLGEQALGIFHDMRLAGMS 431

Query: 410 PNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVS----TALIDMYAKCGNIVE 465
           P+ +T    L+AC+  G +  G+   E+  S    S+I       + ++D+  + G + E
Sbjct: 432 PDGITYIGALTACSYTGKVKEGR---EIFNSMTVNSSIRPGAEHYSCMVDLLGRSGLVEE 488

Query: 466 ARELFDLMSHKSE-VTWNTMISGYGLH 491
           A +L   M  + + V W  ++    +H
Sbjct: 489 AFDLIKNMPVEPDAVIWGALMGACRMH 515



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 86/350 (24%), Positives = 161/350 (46%), Gaps = 72/350 (20%)

Query: 252 VSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNS 311
           ++  ++ G +E A   F  +      S NA+++GY  N   +++L LFR++ +      +
Sbjct: 24  IAHLARAGNIEGARAAFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSRDLASYN 83

Query: 312 STIVGL------IP--------VFYPFGHLHLTNCIHSFCLKSGIVSNS----------- 346
           + I GL      +P        + +P   +  T+ +  + ++ G+++++           
Sbjct: 84  ALISGLSLRRQTLPDAAAALASIPFPPSVVSFTSLLRGY-VRHGLLADAIRLFQQMPERN 142

Query: 347 ----SVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQE 402
               +VL        R+NE   AR+LFDE  ++ + +W AM++GY Q G   EA +LF E
Sbjct: 143 HVSYTVLLGGLLDAGRVNE---ARRLFDEMPDRDVVAWTAMLSGYCQAGRITEARALFDE 199

Query: 403 MQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGN 462
           M    V    V+ ++++S  AQ G ++L + + E++  RN  S     TA++  Y + G+
Sbjct: 200 MPKRNV----VSWTAMISGYAQNGEVNLARKLFEVMPERNEVS----WTAMLVGYIQAGH 251

Query: 463 IVEARELFDLMS-------------------------------HKSEVTWNTMISGYGLH 491
           + +A ELF+ M                                 + + TW+ MI  Y  +
Sbjct: 252 VEDAAELFNAMPEHPVAACNAMMVGFGQRGMVDAAKTVFEKMCERDDGTWSAMIKAYEQN 311

Query: 492 GHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIH 541
              +EAL  F EML  G+RP+  + +S+L  C+   ++  G E+  +M+ 
Sbjct: 312 EFLMEALSTFREMLWRGVRPNYPSVISILTVCAALAVLDYGREVHAAMLR 361


>gi|449435340|ref|XP_004135453.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g02980-like [Cucumis sativus]
 gi|449478665|ref|XP_004155385.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g02980-like [Cucumis sativus]
          Length = 604

 Score =  454 bits (1169), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 236/585 (40%), Positives = 346/585 (59%), Gaps = 29/585 (4%)

Query: 215 AVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYS---KCGEVERAELLFRDI 271
           ++L     + EL+   +IQ   +K      + VLT L++F +       ++ A  LF  I
Sbjct: 34  SLLSKCTSLNELK---QIQAYTIKTNLQSDISVLTKLINFCTLNPTTSYMDHAHHLFDQI 90

Query: 272 VRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTN 331
           +  D+I  N M  GY  +     +  LF +LL S          GL+P  Y F  L L  
Sbjct: 91  LDKDIILFNIMARGYARSNSPYLAFSLFGELLCS----------GLLPDDYTFSSL-LKA 139

Query: 332 C-----------IHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASW 380
           C           +H F +K G+  N  +   L  +Y+  N+M AAR +FDE  +  + S+
Sbjct: 140 CASSKALREGMGLHCFAVKLGLNHNIYICPTLINMYAECNDMNAARGVFDEMEQPCIVSY 199

Query: 381 NAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKS 440
           NA+I GY ++    EA+SLF+E+QAS + P  VT+ S++ +CA LGA+ LGKW+HE VK 
Sbjct: 200 NAIITGYARSSQPNEALSLFRELQASNIEPTDVTMLSVIMSCALLGALDLGKWIHEYVKK 259

Query: 441 RNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQL 500
           + F+  + V+TALIDM+AKCG++ +A  +F+ M  +    W+ MI  +  HG GL+A+ +
Sbjct: 260 KGFDKYVKVNTALIDMFAKCGSLTDAISIFEGMRVRDTQAWSAMIVAFATHGDGLKAISM 319

Query: 501 FSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILG 560
           F EM   G+RP  +TFL +LYACSHAGLV +G   F SM   +G  P  +HY CMVD+LG
Sbjct: 320 FEEMKREGVRPDEITFLGLLYACSHAGLVEQGRGYFYSMSKTYGITPGIKHYGCMVDLLG 379

Query: 561 RAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVL 620
           RAG L++A  F+  L ++  P +W  LL AC  H +  +A+   E++FELD  + G +V+
Sbjct: 380 RAGHLDEAYNFVDKLEIKATPILWRTLLSACSTHGNVEMAKRVIERIFELDDAHGGDYVI 439

Query: 621 LSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAM 680
           LSN+Y+    +     +R+++K R + K PGC+ +EV    H F SGD +H  S  +   
Sbjct: 440 LSNLYARVGRWEDVNHLRKLMKDRGVVKVPGCSSVEVNNVVHEFFSGDGVHCVSVELRRA 499

Query: 681 LEKLNGKMREAGFQTETVTALH-DVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIK 739
           L++L  +++  G+  +T    H D+EEE KEL+++ HSEKLA+AFGL+ T PGT IR+ K
Sbjct: 500 LDELMKEIKLVGYVPDTSLVYHADMEEEGKELVLRYHSEKLAMAFGLLNTPPGTTIRVAK 559

Query: 740 NLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           NLR+C DCH A K IS + GR IV+RD  RFH F+ G CSCGD+W
Sbjct: 560 NLRICGDCHNAAKLISFIFGRKIVIRDVQRFHRFEDGKCSCGDFW 604



 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 106/408 (25%), Positives = 208/408 (50%), Gaps = 8/408 (1%)

Query: 93  CFYTHLRKNTALTPDNFTYSFV--LSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALV 150
           C +T  + ++A + + F  + +  LS  S C   +    +  + I +   SD+ V   L+
Sbjct: 9   CQFTLTKPSSAFSKNEFVINQLHPLSLLSKCTSLNELKQIQAYTIKTNLQSDISVLTKLI 68

Query: 151 D---LYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTW 207
           +   L    S++  A  +FD++ +KD +L+N M  G  ++     +  +FG+++ +G   
Sbjct: 69  NFCTLNPTTSYMDHAHHLFDQILDKDIILFNIMARGYARSNSPYLAFSLFGELLCSG-LL 127

Query: 208 LDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELL 267
            D  + +++L A A  + LR GM + C  +KLG + ++Y+   L++ Y++C ++  A  +
Sbjct: 128 PDDYTFSSLLKACASSKALREGMGLHCFAVKLGLNHNIYICPTLINMYAECNDMNAARGV 187

Query: 268 FRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHL 327
           F ++ +P ++S NA+I+GY  + +   +L LFR+L AS       T++ +I      G L
Sbjct: 188 FDEMEQPCIVSYNAIITGYARSSQPNEALSLFRELQASNIEPTDVTMLSVIMSCALLGAL 247

Query: 328 HLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGY 387
            L   IH +  K G      V TAL  ++++   +  A  +F+    +   +W+AMI  +
Sbjct: 248 DLGKWIHEYVKKKGFDKYVKVNTALIDMFAKCGSLTDAISIFEGMRVRDTQAWSAMIVAF 307

Query: 388 TQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGK-WVHELVKSRNFESN 446
             +G   +AIS+F+EM+   V P+ +T   +L AC+  G +  G+ + + + K+      
Sbjct: 308 ATHGDGLKAISMFEEMKREGVRPDEITFLGLLYACSHAGLVEQGRGYFYSMSKTYGITPG 367

Query: 447 IYVSTALIDMYAKCGNIVEARELFDLMSHK-SEVTWNTMISGYGLHGH 493
           I     ++D+  + G++ EA    D +  K + + W T++S    HG+
Sbjct: 368 IKHYGCMVDLLGRAGHLDEAYNFVDKLEIKATPILWRTLLSACSTHGN 415



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 127/539 (23%), Positives = 242/539 (44%), Gaps = 56/539 (10%)

Query: 13  LSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCY---ARALFFSIPK 69
           LSLL    + ++L Q  A  I    Q+D+S +TKL +  +    T Y   A  LF  I  
Sbjct: 33  LSLLSKCTSLNELKQIQAYTIKTNLQSDISVLTKLINFCTLNPTTSYMDHAHHLFDQILD 92

Query: 70  PDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVL 129
            D+ LFN++ RG++ +  P  +   +  L   + L PD++T+S +L A ++      G+ 
Sbjct: 93  KDIILFNIMARGYARSNSPYLAFSLFGELL-CSGLLPDDYTFSSLLKACASSKALREGMG 151

Query: 130 LHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCC 189
           LH  A+  G   ++++   L+++Y + + + +AR VFD+M +   V +N++I+G  ++  
Sbjct: 152 LHCFAVKLGLNHNIYICPTLINMYAECNDMNAARGVFDEMEQPCIVSYNAIITGYARSSQ 211

Query: 190 FQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLT 249
             +++ +F ++  +     D T ++ ++ + A +  L LG  I     K GF  +V V T
Sbjct: 212 PNEALSLFRELQASNIEPTDVTMLSVIM-SCALLGALDLGKWIHEYVKKKGFDKYVKVNT 270

Query: 250 GLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERV 309
            L+  ++KCG +  A  +F  +   D  + +AMI  +  +G    ++ +F ++     R 
Sbjct: 271 ALIDMFAKCGSLTDAISIFEGMRVRDTQAWSAMIVAFATHGDGLKAISMFEEMKREGVRP 330

Query: 310 NSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLF 369
           +  T +GL           L  C H+  ++ G         ++S  Y             
Sbjct: 331 DEITFLGL-----------LYACSHAGLVEQG----RGYFYSMSKTY------------- 362

Query: 370 DESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAIS 429
                  +  +  M+    + G  +EA +   +++   +   P+   ++LSAC+  G + 
Sbjct: 363 --GITPGIKHYGCMVDLLGRAGHLDEAYNFVDKLE---IKATPILWRTLLSACSTHGNVE 417

Query: 430 LGKWVHE-LVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHK--------SEVT 480
           + K V E + +  +     YV   L ++YA+ G   +   L  LM  +        S V 
Sbjct: 418 MAKRVIERIFELDDAHGGDYV--ILSNLYARVGRWEDVNHLRKLMKDRGVVKVPGCSSVE 475

Query: 481 WNTMI----SGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEI 535
            N ++    SG G+H   +E  +   E++        V   S++Y   HA +  EG E+
Sbjct: 476 VNNVVHEFFSGDGVHCVSVELRRALDELMKEIKLVGYVPDTSLVY---HADMEEEGKEL 531


>gi|224124974|ref|XP_002319471.1| predicted protein [Populus trichocarpa]
 gi|222857847|gb|EEE95394.1| predicted protein [Populus trichocarpa]
          Length = 703

 Score =  454 bits (1168), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 242/639 (37%), Positives = 370/639 (57%), Gaps = 20/639 (3%)

Query: 148 ALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMV-RNGGT 206
            LV  Y K   +  ARKVFDKMPE++ V W SM+ G ++     ++  +F  M  +N  +
Sbjct: 83  GLVSGYVKNGMISEARKVFDKMPERNVVSWTSMVRGYVQEGLIDEAELLFWRMPEKNVVS 142

Query: 207 WLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAEL 266
           W   T +   L     V E R   ++  +         V   T ++      G +  A  
Sbjct: 143 W---TVMLGGLIEDGRVDEARRLFDMIPV-------KDVVASTNMIGGLCSEGRLSEARE 192

Query: 267 LFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGH 326
           +F ++ + ++++  +MISGY  N K + + +LF  +       N  T   ++  +   G 
Sbjct: 193 IFDEMPQRNVVAWTSMISGYAMNNKVDVARKLFEVMPDK----NEVTWTAMLKGYTRSGR 248

Query: 327 LHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAG 386
           ++      +   K+  V   +    +   +    E+  AR +FD+  EK   +W+A+I  
Sbjct: 249 INEA----AELFKAMPVKPVAACNGMIMGFGLNGEVGKARWVFDQMKEKDDGTWSALIKI 304

Query: 387 YTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESN 446
           Y + G   EA++LF  MQ   V PN  ++ SILS C  L ++  G+ VH  +   +F+ +
Sbjct: 305 YERKGFELEALALFSLMQREGVRPNFPSIISILSVCGSLASLDHGRQVHSQLVRSHFDLD 364

Query: 447 IYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLH 506
           IYVS+ LI MY KCG++V  + +FD  S K  V WN++I+GY  HG G +AL++F EM  
Sbjct: 365 IYVSSVLITMYIKCGDLVTGKRVFDRFSSKDIVMWNSIIAGYAQHGFGEKALEVFHEMFS 424

Query: 507 SGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLE 566
           SG  P  +TF+ VL AC + G V+EG EIF+SM   +      EHYACMVD+LGRAG+L 
Sbjct: 425 SGAAPDEITFIGVLSACGYTGKVKEGLEIFESMKSKYQVDQKTEHYACMVDLLGRAGKLN 484

Query: 567 KALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYS 626
           +A+  I+ + VE    VWGALL AC  HK+ +LA +A++KL +L+P + G ++LLSN+Y+
Sbjct: 485 EAMNLIENMPVEADAIVWGALLSACRTHKNLDLAEIAAKKLLQLEPSSAGPYILLSNLYA 544

Query: 627 AERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQL-HPQSTAIYAMLEKLN 685
           ++  +   A +R+ ++ R ++K+PGC+ IEV    H+FT G    HP+   I   LEKL 
Sbjct: 545 SQSRWKDVAELRKTMRARNVSKSPGCSWIEVDNKVHMFTGGGSASHPEHEMIMKKLEKLG 604

Query: 686 GKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCL 745
             +REAG+  +    +HDV+EE+K   ++ HSEK+A+A+GL+    G  IR++KNLRVC 
Sbjct: 605 ASLREAGYCPDGSFVMHDVDEEDKVHSLRHHSEKMAVAYGLLKVPVGKPIRVMKNLRVCG 664

Query: 746 DCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           DCH+A K I++VTGR I++RDANRFHHFK G+CSC D+W
Sbjct: 665 DCHSAIKLIAQVTGREIILRDANRFHHFKDGLCSCRDFW 703



 Score =  113 bits (282), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 89/339 (26%), Positives = 163/339 (48%), Gaps = 61/339 (17%)

Query: 252 VSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNS 311
           +S++++ G+++RA  +F D+    + S NA+++GY  N +   + +LF ++    ER N+
Sbjct: 23  ISYFARLGQIDRARNIFDDLQSKTVTSWNAIVAGYFHNKRPAEAQKLFDKM---PER-NT 78

Query: 312 STIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDE 371
            +  GL+  +                +K+G++S                    ARK+FD+
Sbjct: 79  ISWNGLVSGY----------------VKNGMISE-------------------ARKVFDK 103

Query: 372 SSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLG 431
             E+++ SW +M+ GY Q GL +EA  LF  M       N V+ + +L    + G +   
Sbjct: 104 MPERNVVSWTSMVRGYVQEGLIDEAELLFWRMPEK----NVVSWTVMLGGLIEDGRVDEA 159

Query: 432 KWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLH 491
           + + +++  +    ++  ST +I      G + EARE+FD M  ++ V W +MISGY ++
Sbjct: 160 RRLFDMIPVK----DVVASTNMIGGLCSEGRLSEAREIFDEMPQRNVVAWTSMISGYAMN 215

Query: 492 GHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEH 551
                A +LF  M       + VT+ ++L   + +G + E  E+F++M      KP+A  
Sbjct: 216 NKVDVARKLFEVMPDK----NEVTWTAMLKGYTRSGRINEAAELFKAM----PVKPVA-- 265

Query: 552 YAC--MVDILGRAGQLEKALEFIKGLAVEPGPAVWGALL 588
            AC  M+   G  G++ KA  ++     E     W AL+
Sbjct: 266 -ACNGMIMGFGLNGEVGKA-RWVFDQMKEKDDGTWSALI 302



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 84/364 (23%), Positives = 158/364 (43%), Gaps = 46/364 (12%)

Query: 339 KSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAIS 398
           +S   S++++     + ++RL +++ AR +FD+   K++ SWNA++AGY  N    EA  
Sbjct: 9   RSYFSSSAAITQCQISYFARLGQIDRARNIFDDLQSKTVTSWNAIVAGYFHNKRPAEAQK 68

Query: 399 LFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNF--------------- 443
           LF +M       N ++ + ++S   + G IS  + V + +  RN                
Sbjct: 69  LFDKMPER----NTISWNGLVSGYVKNGMISEARKVFDKMPERNVVSWTSMVRGYVQEGL 124

Query: 444 ------------ESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLH 491
                       E N+   T ++    + G + EAR LFD++  K  V    MI G    
Sbjct: 125 IDEAELLFWRMPEKNVVSWTVMLGGLIEDGRVDEARRLFDMIPVKDVVASTNMIGGLCSE 184

Query: 492 GHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEH 551
           G   EA ++F EM    +    V + S++   +    V    ++F+ M   +        
Sbjct: 185 GRLSEAREIFDEMPQRNV----VAWTSMISGYAMNNKVDVARKLFEVMPDKNEVT----- 235

Query: 552 YACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELD 611
           +  M+    R+G++ +A E  K + V+P  A  G ++G  + + +   AR   +++ E D
Sbjct: 236 WTAMLKGYTRSGRINEAAELFKAMPVKPVAACNGMIMGFGL-NGEVGKARWVFDQMKEKD 294

Query: 612 PENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKL-AKAPG-CTLIEVGGTPHVFTSGDQ 669
               G    L  IY  +   L+A  +  ++++  +    P   +++ V G+      G Q
Sbjct: 295 D---GTWSALIKIYERKGFELEALALFSLMQREGVRPNFPSIISILSVCGSLASLDHGRQ 351

Query: 670 LHPQ 673
           +H Q
Sbjct: 352 VHSQ 355



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 49/227 (21%), Positives = 105/227 (46%), Gaps = 4/227 (1%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           AR +F  + + D   ++ +I+ +        ++  ++ L +   + P+  +   +LS   
Sbjct: 283 ARWVFDQMKEKDDGTWSALIKIYERKGFELEALALFS-LMQREGVRPNFPSIISILSVCG 341

Query: 120 ACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNS 179
           +      G  +H   + S +  D++V + L+ +Y K   + + ++VFD+   KD V+WNS
Sbjct: 342 SLASLDHGRQVHSQLVRSHFDLDIYVSSVLITMYIKCGDLVTGKRVFDRFSSKDIVMWNS 401

Query: 180 MISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEI-QCLGLK 238
           +I+G  ++   + ++ VF +M  +G    D  +   VL A     +++ G+EI + +  K
Sbjct: 402 IIAGYAQHGFGEKALEVFHEMFSSGAA-PDEITFIGVLSACGYTGKVKEGLEIFESMKSK 460

Query: 239 LGFHDHVYVLTGLVSFYSKCGEVERAELLFRDI-VRPDLISCNAMIS 284
                       +V    + G++  A  L  ++ V  D I   A++S
Sbjct: 461 YQVDQKTEHYACMVDLLGRAGKLNEAMNLIENMPVEADAIVWGALLS 507


>gi|302791701|ref|XP_002977617.1| hypothetical protein SELMODRAFT_106776 [Selaginella moellendorffii]
 gi|300154987|gb|EFJ21621.1| hypothetical protein SELMODRAFT_106776 [Selaginella moellendorffii]
          Length = 805

 Score =  454 bits (1167), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 265/731 (36%), Positives = 404/731 (55%), Gaps = 18/731 (2%)

Query: 63  LFFSIPKPDLFLFNVIIRGFSNNEMPKSSIC-FYTHLRKNTALTPDNFTYSFVLSAASAC 121
           +F  I    + L+ V+I  + +     ++I  F+  L++  AL  D   +  VLSA S+ 
Sbjct: 84  VFHKIAHKSIVLWTVLISAYVSRGHSAAAIALFHRILQEGIAL--DAIVFVSVLSACSSE 141

Query: 122 CDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEK-DTVLWNSM 180
              + G L+H  A+ +G G    V +ALV +Y +   ++ A  +F  +    D VLWN+M
Sbjct: 142 EFLAAGRLIHRCAVEAGLGLQEIVASALVSMYGRCGSLRDANALFGHLERHLDVVLWNAM 201

Query: 181 ISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQ----CLG 236
           I+   +N   ++++ +F  M++ G    D  +  +V  A +    LR   +++    CL 
Sbjct: 202 ITANSQNGSPREALEIFYRMLQLG-IPPDLVTFVSVFKACSSSPSLR-ASQVKGFHACLD 259

Query: 237 LKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSL 296
            + G    V V T LV+ Y++CGE++ A   F ++   + +S  +MI+ +T  G    ++
Sbjct: 260 -ETGLGSDVVVATALVNAYARCGEIDCARKFFAEMPERNAVSWTSMIAAFTQIGHL-LAV 317

Query: 297 RLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVY 356
             F  +L        ST   L         L +   + +   + G+V++ +++T L   Y
Sbjct: 318 ETFHAMLLEGVVPTRST---LFAALEGCEDLRVARLVEAIAQEIGVVTDVAIVTDLVMAY 374

Query: 357 SRLNEMEAARKLFD--ESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVT 414
           +R +  E A ++F   E  E   A   AMIA Y Q         L+       ++P+ + 
Sbjct: 375 ARCDGQEDAIRVFSAREEGEWDAALVTAMIAVYAQCRDRRSTFKLWGAAIERGISPDRIL 434

Query: 415 VSSILSACAQLGAISLGKWVHELVKS-RNFESNIYVSTALIDMYAKCGNIVEARELFDLM 473
             + L ACA L A+S G+ +H  V + R  + ++ +  A++ MY +CG++ +AR+ FD M
Sbjct: 435 YITALDACASLAALSEGRQIHACVAADRRLDRDVTLGNAIVSMYGQCGSLRDARDAFDGM 494

Query: 474 SHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGD 533
             + E++WN M+S    HG   +   LF  ML  G     + FL++L AC+HAGLV+ G 
Sbjct: 495 PARDEISWNAMLSASAQHGRVEDCCDLFRAMLQEGFDAERIAFLNLLSACAHAGLVKAGC 554

Query: 534 EIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMI 593
           E F +M  DHG  P  EHY CMVD+LGR G+L  A   ++ + V P  A W AL+GAC I
Sbjct: 555 EHFSAMTGDHGVVPATEHYGCMVDLLGRKGRLADAHGIVQAMPVPPDAATWMALMGACRI 614

Query: 594 HKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCT 653
           + DT   R A+E++ EL  ++   +V L NIYSA   +  AA VR+++    L K PG +
Sbjct: 615 YGDTERGRFAAERVLELRADHTAAYVALCNIYSAAGRWDDAAAVRKIMADLGLRKIPGVS 674

Query: 654 LIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMM 713
            IE+    H F   D+ HPQS AIYA LE++ G +  AG++  T   LHDVEEE+KE ++
Sbjct: 675 SIEIRSKVHEFVVRDRSHPQSEAIYAELERVMGAIERAGYRAVTGEVLHDVEEEQKEQLL 734

Query: 714 KVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHF 773
           + HSEKLAIAFG+++T  G+ +R+IKNLRVC+DCH A+KFISKV GR IVVRD  RFHHF
Sbjct: 735 RFHSEKLAIAFGMMSTPQGSTLRVIKNLRVCVDCHNASKFISKVFGREIVVRDVRRFHHF 794

Query: 774 KGGVCSCGDYW 784
           K G CSCGDYW
Sbjct: 795 KDGACSCGDYW 805



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 84/297 (28%), Positives = 143/297 (48%), Gaps = 4/297 (1%)

Query: 246 YVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLAS 305
           Y+ + LV  Y +CG +E A  +F  I    ++    +IS Y   G + +++ LF ++L  
Sbjct: 63  YLASSLVYMYLRCGSLESAIDVFHKIAHKSIVLWTVLISAYVSRGHSAAAIALFHRILQE 122

Query: 306 AERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAA 365
              +++   V ++        L     IH   +++G+     V +AL ++Y R   +  A
Sbjct: 123 GIALDAIVFVSVLSACSSEEFLAAGRLIHRCAVEAGLGLQEIVASALVSMYGRCGSLRDA 182

Query: 366 RKLFDESSEK-SLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQ 424
             LF        +  WNAMI   +QNG   EA+ +F  M    + P+ VT  S+  AC+ 
Sbjct: 183 NALFGHLERHLDVVLWNAMITANSQNGSPREALEIFYRMLQLGIPPDLVTFVSVFKACSS 242

Query: 425 LGAI--SLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWN 482
             ++  S  K  H  +      S++ V+TAL++ YA+CG I  AR+ F  M  ++ V+W 
Sbjct: 243 SPSLRASQVKGFHACLDETGLGSDVVVATALVNAYARCGEIDCARKFFAEMPERNAVSWT 302

Query: 483 TMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSM 539
           +MI+ +   GH L A++ F  ML  G+ P+  T  + L  C    + R  + I Q +
Sbjct: 303 SMIAAFTQIGH-LLAVETFHAMLLEGVVPTRSTLFAALEGCEDLRVARLVEAIAQEI 358



 Score =  112 bits (280), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 70/243 (28%), Positives = 121/243 (49%), Gaps = 3/243 (1%)

Query: 350 TALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVA 409
           ++L  +Y R   +E+A  +F + + KS+  W  +I+ Y   G +  AI+LF  +    +A
Sbjct: 66  SSLVYMYLRCGSLESAIDVFHKIAHKSIVLWTVLISAYVSRGHSAAAIALFHRILQEGIA 125

Query: 410 PNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEAREL 469
            + +   S+LSAC+    ++ G+ +H             V++AL+ MY +CG++ +A  L
Sbjct: 126 LDAIVFVSVLSACSSEEFLAAGRLIHRCAVEAGLGLQEIVASALVSMYGRCGSLRDANAL 185

Query: 470 FD-LMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGL 528
           F  L  H   V WN MI+    +G   EAL++F  ML  GI P  VTF+SV  ACS +  
Sbjct: 186 FGHLERHLDVVLWNAMITANSQNGSPREALEIFYRMLQLGIPPDLVTFVSVFKACSSSPS 245

Query: 529 VREGD-EIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGAL 587
           +R    + F + + + G          +V+   R G+++ A +F   +  E     W ++
Sbjct: 246 LRASQVKGFHACLDETGLGSDVVVATALVNAYARCGEIDCARKFFAEMP-ERNAVSWTSM 304

Query: 588 LGA 590
           + A
Sbjct: 305 IAA 307


>gi|147775281|emb|CAN61593.1| hypothetical protein VITISV_030555 [Vitis vinifera]
          Length = 673

 Score =  454 bits (1167), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 255/694 (36%), Positives = 383/694 (55%), Gaps = 51/694 (7%)

Query: 100 KNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIV--SGYGSDLFVGAALVDLYFKFS 157
           K  +      ++  +L   +  C  S+  L   HA++  +G+  D ++  +LV  Y   S
Sbjct: 22  KGHSTETSKLSHKAILHLLNTQCTTSLHHLKQAHALILRTGHLQDSYIAGSLVKSYANVS 81

Query: 158 W-----VKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTS 212
                  +S+ +VFD + + +  LWN MI   ++N     +I ++ +MV    +  +  +
Sbjct: 82  TNRYLSFESSLRVFDFVRKPNVFLWNCMIKVCIENNEPFKAILLYYEMVV-AHSRPNKYT 140

Query: 213 VAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIV 272
             AVL A ++   +  G+++    +K G     ++L+  +  Y+  G +  A  +  D  
Sbjct: 141 YPAVLKACSDSGVVAEGVQVHAHLVKHGLGGDGHILSSAIRMYASFGRLVEARRILDDKG 200

Query: 273 -RPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTN 331
              D +  NAMI GY   G+ E++  LF  +       + S I                 
Sbjct: 201 GEVDAVCWNAMIDGYLRFGEVEAARELFEGM------PDRSMI----------------- 237

Query: 332 CIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNG 391
                          S   A+ + +SR   +E AR+ FDE  E+   SW+AMI GY Q G
Sbjct: 238 ---------------STWNAMISGFSRCGMVEVAREFFDEMKERDEISWSAMIDGYIQEG 282

Query: 392 LTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVST 451
              EA+ +F +MQ  K+ P    + S+LSACA LGA+  G+W+H   K  + + +  + T
Sbjct: 283 CFMEALEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQGRWIHTYAKRNSIQLDGVLGT 342

Query: 452 ALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRP 511
           +L+DMYAKCG I  A E+F+ MS+K   +WN MI G  +HG   +A+ LFS+M    I P
Sbjct: 343 SLVDMYAKCGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFSKM---DIYP 399

Query: 512 SGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEF 571
           + +TF+ VL AC+H GLV++G  IF SM  ++G +P  EHY C+VD+LGRAG L +A + 
Sbjct: 400 NEITFVGVLNACAHGGLVQKGLTIFNSMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAEKV 459

Query: 572 IKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDY 631
           +  +  EP PAVWGALLGAC  H +  L     + L EL+P+N G + LLSNIY+    +
Sbjct: 460 VSSIPTEPTPAVWGALLGACRKHGNVELGERVGKILLELEPQNSGRYTLLSNIYAKAGRW 519

Query: 632 LQAATVRQVVKKRKLAKAPGCTLIEVG-GTPHVFTSGDQLHPQSTAIYAMLEKLNGKMRE 690
            +   VR+++K+R +   PG ++I++G G  H F  GD  HPQ   IY ML+K+  +++ 
Sbjct: 520 EEVGEVRKLMKERGIKTTPGTSIIDLGRGEVHKFIIGDGSHPQVKDIYQMLDKVKERLQM 579

Query: 691 AGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTA 750
            G++ +    L D++EEEKE  +  HSEKLAI FGLI T PGT IRI+KNLRVC DCH+A
Sbjct: 580 EGYEPDPSQVLFDIDEEEKETAVWQHSEKLAIGFGLINTSPGTTIRIVKNLRVCEDCHSA 639

Query: 751 TKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           TK IS+V  R I+VRD  R+HHF+ G CSC D+W
Sbjct: 640 TKLISQVYNREIIVRDRIRYHHFRNGACSCKDFW 673



 Score = 60.1 bits (144), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 80/342 (23%), Positives = 131/342 (38%), Gaps = 69/342 (20%)

Query: 27  QTHAQIIIHGFQND---LSTVTKL---------AHRLSDFK-----ATCY---------- 59
           Q HA ++ HG   D   LS+  ++         A R+ D K     A C+          
Sbjct: 159 QVHAHLVKHGLGGDGHILSSAIRMYASFGRLVEARRILDDKGGEVDAVCWNAMIDGYLRF 218

Query: 60  -----ARALFFSIPKPDLF-LFNVIIRGFSN-----------------NEMPKSSI---- 92
                AR LF  +P   +   +N +I GFS                  +E+  S++    
Sbjct: 219 GEVEAARELFEGMPDRSMISTWNAMISGFSRCGMVEVAREFFDEMKERDEISWSAMIDGY 278

Query: 93  ----CFYT-----HLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDL 143
               CF       H  +   + P  F    VLSA +       G  +H +A  +    D 
Sbjct: 279 IQEGCFMEALEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQGRWIHTYAKRNSIQLDG 338

Query: 144 FVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRN 203
            +G +LVD+Y K   +  A +VF+KM  K+   WN+MI GL  +   +D+I +F  M   
Sbjct: 339 VLGTSLVDMYAKCGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFSKM--- 395

Query: 204 GGTWLDSTSVAAVLPAVAEVQELRLGMEI-QCLGLKLGFHDHVYVLTGLVSFYSKCGEVE 262
              + +  +   VL A A    ++ G+ I   +  + G    +     +V    + G + 
Sbjct: 396 -DIYPNEITFVGVLNACAHGGLVQKGLTIFNSMRKEYGVEPQIEHYGCIVDLLGRAGLLT 454

Query: 263 RAELLFRDI-VRPDLISCNAMISGYTCNGKTESSLRLFRQLL 303
            AE +   I   P      A++     +G  E   R+ + LL
Sbjct: 455 EAEKVVSSIPTEPTPAVWGALLGACRKHGNVELGERVGKILL 496


>gi|242076924|ref|XP_002448398.1| hypothetical protein SORBIDRAFT_06g026540 [Sorghum bicolor]
 gi|241939581|gb|EES12726.1| hypothetical protein SORBIDRAFT_06g026540 [Sorghum bicolor]
          Length = 865

 Score =  454 bits (1167), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 277/842 (32%), Positives = 437/842 (51%), Gaps = 95/842 (11%)

Query: 6   PQSRNLFLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFF 65
           P +R L L+ +            H  +I H     L+   KL  RLSD      A  LF 
Sbjct: 56  PDARRLLLTDI-----------AHPNVITHNVM--LNGYVKLG-RLSD------AVELFG 95

Query: 66  SIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRS 125
            +P  D+  +N ++ G+  ++   +S+  +  + ++   +P+ FT+++ + +  A  +RS
Sbjct: 96  RMPARDVASWNTLMSGYFQSQQYLASLESFVSMHRSGDSSPNAFTFAYAMKSCGALGERS 155

Query: 126 IGVLLHGHAIVSGYGSDLFVGAALVDL-------------------------------YF 154
           + + L G     G   D  V AALVD+                               Y 
Sbjct: 156 LALQLLGMVQKFGSQDDSDVAAALVDMFVRCGTVDLASRLFVRIKEPTIFCRNSMLVGYV 215

Query: 155 KFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVA 214
           K   V  A ++FD MPE+D V WN M+S L ++   ++++ +  DM ++ G  LDST+  
Sbjct: 216 KTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDM-QSKGVRLDSTTYT 274

Query: 215 AVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRP 274
           + L A A +  LR G ++    ++       YV + LV  Y+KCG  + A+ +F  +   
Sbjct: 275 SSLTACARLSSLRWGKQLHAQVIRNLPCIDPYVASALVELYAKCGCFKEAKGVFNSLHDR 334

Query: 275 DLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIH 334
           + ++   +I+G+  +G    S+ LF Q+ A    ++   +  LI        L L   +H
Sbjct: 335 NNVAWTVLIAGFLQHGCFTESVELFNQMRAELMTLDQFALATLISGCCSRMDLCLGRQLH 394

Query: 335 SFCLKSG-----IVSNSSV--------------------------LTALSTVYSRLNEME 363
           S CLKSG     +VSNS +                           T++ T +S++  + 
Sbjct: 395 SLCLKSGQIQAVVVSNSLISMYAKCDNLQSAESIFRFMNEKDIVSWTSMITAHSQVGNIA 454

Query: 364 AARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASK-VAPNPVTVSSILSAC 422
            AR+ FD  S K++ +WNAM+  Y Q+G  E+ + ++  M + K V P+ VT  ++   C
Sbjct: 455 KAREFFDGMSTKNVITWNAMLGAYIQHGAEEDGLRMYNVMLSEKDVRPDWVTYVTLFKGC 514

Query: 423 AQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWN 482
           A LGA  LG  +           +  V+ A+I MY+KCG I+EAR++FD ++ K  V+WN
Sbjct: 515 ADLGANKLGDQIIGRTVKVGLILDTSVANAVITMYSKCGRILEARKVFDFLNVKDIVSWN 574

Query: 483 TMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHD 542
            MI+GY  HG G +A+++F ++L  G +P  +++++VL  CSH+GLV+EG   F  M   
Sbjct: 575 AMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSGLVQEGKSYFDMMKRV 634

Query: 543 HGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARV 602
           H   P  EH++CMVD+LGRAG L +A + I  + ++P   VWGALL AC IH +  LA +
Sbjct: 635 HNISPGLEHFSCMVDLLGRAGHLTEAKDLIDEMPMKPTAEVWGALLSACKIHGNNELAEL 694

Query: 603 ASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPH 662
           A++ +FELD  + G ++L++ IY+       +A +R++++ + + K PG + +EV    H
Sbjct: 695 AAKHVFELDSPDSGSYMLMAKIYADAGKSDDSAQIRKLMRDKGIKKNPGYSWMEVNNKVH 754

Query: 663 VFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAI 722
           VF + D  HPQ  AI   L++L  K+   G+   T +   ++           HSEKLA+
Sbjct: 755 VFKADDVSHPQVIAIRKKLDELMEKIARLGY-VRTDSPRSEIH----------HSEKLAV 803

Query: 723 AFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGD 782
           AFGL++      I I+KNLR+C DCHT  K IS VTGR  V+RDA RFHHF GG CSCGD
Sbjct: 804 AFGLMSLPAWMPIHIMKNLRICGDCHTVIKLISSVTGREFVIRDAVRFHHFNGGSCSCGD 863

Query: 783 YW 784
           YW
Sbjct: 864 YW 865



 Score = 40.8 bits (94), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 36/157 (22%), Positives = 61/157 (38%), Gaps = 34/157 (21%)

Query: 445 SNIYVSTALIDMYAKCGNIVEAR--------------------------------ELFDL 472
           S +++   L+  Y  CG + +AR                                ELF  
Sbjct: 37  SAVFLQNTLLHAYLSCGALPDARRLLLTDIAHPNVITHNVMLNGYVKLGRLSDAVELFGR 96

Query: 473 MSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSG-IRPSGVTFLSVLYACSHAGLVRE 531
           M  +   +WNT++SGY      L +L+ F  M  SG   P+  TF   + +C   G    
Sbjct: 97  MPARDVASWNTLMSGYFQSQQYLASLESFVSMHRSGDSSPNAFTFAYAMKSCGALGERSL 156

Query: 532 GDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKA 568
             ++   M+   G +  ++  A +VD+  R G ++ A
Sbjct: 157 ALQLL-GMVQKFGSQDDSDVAAALVDMFVRCGTVDLA 192


>gi|449487256|ref|XP_004157540.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Cucumis sativus]
          Length = 782

 Score =  454 bits (1167), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 265/771 (34%), Positives = 402/771 (52%), Gaps = 98/771 (12%)

Query: 111 YSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMP 170
           ++ +L  +    D   G  +H   I  G    +++   L+  Y K   ++ A  VFD+MP
Sbjct: 13  FAHILQTSVRIKDPFAGRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGSLRFAHHVFDEMP 72

Query: 171 EKDTVLWNSMISGL---------------MKNC----------------CFQDSIWVFGD 199
            K T  WN++ISG                M +C                 F ++IW+F  
Sbjct: 73  LKSTFSWNTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWMFAK 132

Query: 200 MVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCG 259
           M+          +V+ VL + A  Q L +G +I    +KLG    V V T L++ Y+KCG
Sbjct: 133 MISERVP-PSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKCG 191

Query: 260 -------------------------------EVERAELLFRDIVRPDLISCNAMISGYTC 288
                                          + E A   F  +   D++S N+MISGY+ 
Sbjct: 192 DPVIAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQ 251

Query: 289 NGKTESSLRLFRQLLASAE-RVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLK-----SGI 342
            G    +L +F ++L     + ++ T+  ++        L++   IH++ L+     SG 
Sbjct: 252 QGYNLEALAIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSGA 311

Query: 343 VSNSSV----------------------------LTALSTVYSRLNEMEAARKLFDESSE 374
           V N+ +                             T+L   Y++L  ++ AR++F++  +
Sbjct: 312 VGNALISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRD 371

Query: 375 KSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWV 434
           + + +W AMI GY QNGL  +A+ LF+ M      PN  T++++LS  + L  +  GK +
Sbjct: 372 RDVVAWTAMIVGYVQNGLWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQI 431

Query: 435 HELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSE-VTWNTMISGYGLHGH 493
           H         S   V+ ALI MYAK GNI  A+ +FDL + K E V+W +MI     HG 
Sbjct: 432 HASAIKAGESSTPSVTNALIAMYAKTGNINVAKRVFDLPNGKKEIVSWTSMIMALAQHGL 491

Query: 494 GLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYA 553
           G EA+ LF  ML  G++P  +T++ VL AC+H GLV +G + +  M   H  +P   HYA
Sbjct: 492 GKEAINLFERMLSVGMKPDHITYVGVLSACTHVGLVEQGRKYYNMMTEVHEIEPTLSHYA 551

Query: 554 CMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPE 613
           CM+D+ GRAG L++A  FI+ + +EP    WG+LL +C IHK+ +LA+VA+E+L  +DP 
Sbjct: 552 CMIDLYGRAGLLQEAYLFIESMPIEPDNIAWGSLLASCKIHKNADLAKVAAERLLLIDPG 611

Query: 614 NVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQ 673
           N G ++ L+N+YSA   +  AA  R+++K R + K  G + I +    H F   D +HPQ
Sbjct: 612 NSGAYLALANVYSACGKWENAAQTRKLMKDRGVRKEKGISWIHIKNEVHAFGVEDVIHPQ 671

Query: 674 STAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGT 733
              IY ++ ++  ++++ GF  +T + LHD+EEE KE ++K HSEKLAIAFGL+ T   T
Sbjct: 672 KDEIYKLMAEIWEEIKKMGFIPDTESVLHDLEEEVKEQILKYHSEKLAIAFGLLNTPENT 731

Query: 734 EIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
            +RI+KNLRVC DCH+A KFISK+ GR I+VRDA RFHHFK G CSC DYW
Sbjct: 732 ALRIMKNLRVCNDCHSAIKFISKLVGREIIVRDATRFHHFKDGSCSCRDYW 782



 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 127/499 (25%), Positives = 222/499 (44%), Gaps = 68/499 (13%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           +R L + +P  D   +  II G++   +  ++I  +  +     + P  FT S VLS+ +
Sbjct: 95  SRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWMFAKMISER-VPPSQFTVSNVLSSCA 153

Query: 120 ACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFD------------ 167
           A     IG  +H   +  G GS + V  +L+++Y K      A+ VFD            
Sbjct: 154 ANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKCGDPVIAKVVFDRMTVKNISTWNA 213

Query: 168 -------------------KMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWL 208
                              KMP++D V WNSMISG  +     +++ +F  M+       
Sbjct: 214 LISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQGYNLEALAIFSKMLNEPSLKP 273

Query: 209 DSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAEL-- 266
           D+ ++A++L A A +++L +G +I    L+        V   L+S Y+K G VE A L  
Sbjct: 274 DNFTLASILSACANLEKLNIGKQIHAYILRAETETSGAVGNALISMYAKSGGVEIARLIV 333

Query: 267 -------------------------------LFRDIVRPDLISCNAMISGYTCNGKTESS 295
                                          +F  +   D+++  AMI GY  NG    +
Sbjct: 334 EHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDRDVVAWTAMIVGYVQNGLWNDA 393

Query: 296 LRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTV 355
           L LFR ++      NS T+  ++ V      L     IH+  +K+G  S  SV  AL  +
Sbjct: 394 LELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQIHASAIKAGESSTPSVTNALIAM 453

Query: 356 YSRLNEMEAARKLFD-ESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVT 414
           Y++   +  A+++FD  + +K + SW +MI    Q+GL +EAI+LF+ M +  + P+ +T
Sbjct: 454 YAKTGNINVAKRVFDLPNGKKEIVSWTSMIMALAQHGLGKEAINLFERMLSVGMKPDHIT 513

Query: 415 VSSILSACAQLGAISLG-KWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLM 473
              +LSAC  +G +  G K+ + + +    E  +     +ID+Y + G + EA    + M
Sbjct: 514 YVGVLSACTHVGLVEQGRKYYNMMTEVHEIEPTLSHYACMIDLYGRAGLLQEAYLFIESM 573

Query: 474 S-HKSEVTWNTMISGYGLH 491
                 + W ++++   +H
Sbjct: 574 PIEPDNIAWGSLLASCKIH 592



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 111/433 (25%), Positives = 181/433 (41%), Gaps = 96/433 (22%)

Query: 204 GGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVER 263
           G +   S   A +L     +++   G  + C  +K G H  VY++  L++FY+K G +  
Sbjct: 4   GNSPTSSEFFAHILQTSVRIKDPFAGRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGSLRF 63

Query: 264 AELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVG------- 316
           A  +F ++      S N +ISGY   G  E S RL  ++        ++ IVG       
Sbjct: 64  AHHVFDEMPLKSTFSWNTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLF 123

Query: 317 ---------LIPVFYPFGHLHLTNC---------------IHSFCLKSGI---------- 342
                    +I    P     ++N                IHSF +K G+          
Sbjct: 124 DNAIWMFAKMISERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSL 183

Query: 343 ---------------------VSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWN 381
                                V N S   AL ++Y +  + E A   F++  ++ + SWN
Sbjct: 184 LNMYAKCGDPVIAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWN 243

Query: 382 AMIAGYTQNGLTEEAISLFQEM-QASKVAPNPVTVSSILSACAQLGAISLGKWVHELV-- 438
           +MI+GY+Q G   EA+++F +M     + P+  T++SILSACA L  +++GK +H  +  
Sbjct: 244 SMISGYSQQGYNLEALAIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQIHAYILR 303

Query: 439 -------------------------------KSRNFESNIYVSTALIDMYAKCGNIVEAR 467
                                           +R    NI   T+L+D Y K GN+  AR
Sbjct: 304 AETETSGAVGNALISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAR 363

Query: 468 ELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAG 527
           E+F+ +  +  V W  MI GY  +G   +AL+LF  M++ G  P+  T  ++L   S   
Sbjct: 364 EIFNKLRDRDVVAWTAMIVGYVQNGLWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLT 423

Query: 528 LVREGDEIFQSMI 540
           ++  G +I  S I
Sbjct: 424 ILEHGKQIHASAI 436



 Score =  116 bits (290), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 109/455 (23%), Positives = 201/455 (44%), Gaps = 77/455 (16%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           A + F  +P  D+  +N +I G+S       ++  ++ +    +L PDNFT + +LSA +
Sbjct: 227 AASQFEKMPDRDIVSWNSMISGYSQQGYNLEALAIFSKMLNEPSLKPDNFTLASILSACA 286

Query: 120 ACCDRSIGVLLH--------------GHAIVSGYGS-------------------DLFVG 146
                +IG  +H              G+A++S Y                     ++   
Sbjct: 287 NLEKLNIGKQIHAYILRAETETSGAVGNALISMYAKSGGVEIARLIVEHNRTSNLNIIAF 346

Query: 147 AALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGT 206
            +L+D Y K   VK AR++F+K+ ++D V W +MI G ++N  + D++ +F  MV N G 
Sbjct: 347 TSLLDGYTKLGNVKPAREIFNKLRDRDVVAWTAMIVGYVQNGLWNDALELFRLMV-NEGP 405

Query: 207 WLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAEL 266
             +S ++AA+L   + +  L  G +I    +K G      V   L++ Y+K G +  A+ 
Sbjct: 406 EPNSYTLAAMLSVSSSLTILEHGKQIHASAIKAGESSTPSVTNALIAMYAKTGNINVAKR 465

Query: 267 LFRDIV--RPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPF 324
           +F D+   + +++S  +MI     +G  + ++ LF ++L+   + +  T VG+       
Sbjct: 466 VF-DLPNGKKEIVSWTSMIMALAQHGLGKEAINLFERMLSVGMKPDHITYVGV------- 517

Query: 325 GHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMI 384
               L+ C H   ++ G              Y+ + E+           E +L+ +  MI
Sbjct: 518 ----LSACTHVGLVEQG-----------RKYYNMMTEVHEI--------EPTLSHYACMI 554

Query: 385 AGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHE---LVKSR 441
             Y + GL +EA    + M    + P+ +   S+L++C       L K   E   L+   
Sbjct: 555 DLYGRAGLLQEAYLFIESM---PIEPDNIAWGSLLASCKIHKNADLAKVAAERLLLIDPG 611

Query: 442 NFESNIYVSTALIDMYAKCGNIVEARELFDLMSHK 476
           N  S  Y+  AL ++Y+ CG    A +   LM  +
Sbjct: 612 N--SGAYL--ALANVYSACGKWENAAQTRKLMKDR 642


>gi|30693150|ref|NP_190486.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75222188|sp|Q5G1T1.1|PP272_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g49170, chloroplastic; AltName: Full=Protein EMBRYO
           DEFECTIVE 2261; Flags: Precursor
 gi|58013018|gb|AAW62962.1| embryo-defective 2261 [Arabidopsis thaliana]
 gi|58013020|gb|AAW62963.1| embryo-defective 2261 [Arabidopsis thaliana]
 gi|332644986|gb|AEE78507.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 850

 Score =  454 bits (1167), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 276/797 (34%), Positives = 432/797 (54%), Gaps = 23/797 (2%)

Query: 6   PQSRNLFLSLLKG---AKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARA 62
           P     F SLLK    A+        HA++I    + D      L    S    +  A  
Sbjct: 59  PMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAED 118

Query: 63  LFFSIP---KPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           +F ++    K D+  ++ ++  + NN     +I  +    +   L P+++ Y+ V+ A S
Sbjct: 119 VFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLE-LGLVPNDYCYTAVIRACS 177

Query: 120 ACCDRSIGVLLHGHAIVSG-YGSDLFVGAALVDLYFKF-SWVKSARKVFDKMPEKDTVLW 177
                 +G +  G  + +G + SD+ VG +L+D++ K  +  ++A KVFDKM E + V W
Sbjct: 178 NSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTW 237

Query: 178 NSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGL 237
             MI+  M+    +++I  F DMV +G    D  ++++V  A AE++ L LG ++    +
Sbjct: 238 TLMITRCMQMGFPREAIRFFLDMVLSGFE-SDKFTLSSVFSACAELENLSLGKQLHSWAI 296

Query: 238 KLGFHDHVYVLTGLVSFYSKC---GEVERAELLFRDIVRPDLISCNAMISGY--TCNGKT 292
           + G  D V     LV  Y+KC   G V+    +F  +    ++S  A+I+GY   CN  T
Sbjct: 297 RSGLVDDVEC--SLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLAT 354

Query: 293 ESSLRLFRQLLASAE-RVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTA 351
           E+ + LF +++       N  T               +   +     K G+ SNSSV  +
Sbjct: 355 EA-INLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANS 413

Query: 352 LSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPN 411
           + +++ + + ME A++ F+  SEK+L S+N  + G  +N   E+A  L  E+   ++  +
Sbjct: 414 VISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVS 473

Query: 412 PVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFD 471
             T +S+LS  A +G+I  G+ +H  V       N  V  ALI MY+KCG+I  A  +F+
Sbjct: 474 AFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFN 533

Query: 472 LMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVRE 531
            M +++ ++W +MI+G+  HG  +  L+ F++M+  G++P+ VT++++L ACSH GLV E
Sbjct: 534 FMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSE 593

Query: 532 GDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGAC 591
           G   F SM  DH  KP  EHYACMVD+L RAG L  A EFI  +  +    VW   LGAC
Sbjct: 594 GWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGAC 653

Query: 592 MIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPG 651
            +H +T L ++A+ K+ ELDP     ++ LSNIY+    + ++  +R+ +K+R L K  G
Sbjct: 654 RVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKERNLVKEGG 713

Query: 652 CTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKEL 711
           C+ IEVG   H F  GD  HP +  IY  L++L  +++  G+  +T   LH +EEE  E 
Sbjct: 714 CSWIEVGDKIHKFYVGDTAHPNAHQIYDELDRLITEIKRCGYVPDTDLVLHKLEEENDEA 773

Query: 712 ----MMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDA 767
               ++  HSEK+A+AFGLI+T     +R+ KNLRVC DCH A K+IS V+GR IV+RD 
Sbjct: 774 EKERLLYQHSEKIAVAFGLISTSKSRPVRVFKNLRVCGDCHNAMKYISTVSGREIVLRDL 833

Query: 768 NRFHHFKGGVCSCGDYW 784
           NRFHHFK G CSC DYW
Sbjct: 834 NRFHHFKDGKCSCNDYW 850



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 106/358 (29%), Positives = 181/358 (50%), Gaps = 34/358 (9%)

Query: 200 MVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCG 259
           M R+G   +DS + +++L +    ++ RLG  +    ++        +   L+S YSK G
Sbjct: 52  MARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSG 111

Query: 260 EVERAELLFRDIVR---PDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVG 316
           +  +AE +F  + R    D++S +AM++ Y  NG+   ++++F + L           +G
Sbjct: 112 DSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLE----------LG 161

Query: 317 LIPVFYPFGHLHLTNCIHS-----------FCLKSG-IVSNSSVLTALSTVYSR-LNEME 363
           L+P  Y +  + +  C +S           F +K+G   S+  V  +L  ++ +  N  E
Sbjct: 162 LVPNDYCYTAV-IRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFE 220

Query: 364 AARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACA 423
            A K+FD+ SE ++ +W  MI    Q G   EAI  F +M  S    +  T+SS+ SACA
Sbjct: 221 NAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACA 280

Query: 424 QLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKC---GNIVEARELFDLMSHKSEVT 480
           +L  +SLGK +H          +  V  +L+DMYAKC   G++ + R++FD M   S ++
Sbjct: 281 ELENLSLGKQLHSWAIRSGLVDD--VECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMS 338

Query: 481 WNTMISGYGLHGH-GLEALQLFSEMLHSG-IRPSGVTFLSVLYACSHAGLVREGDEIF 536
           W  +I+GY  + +   EA+ LFSEM+  G + P+  TF S   AC +    R G ++ 
Sbjct: 339 WTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVL 396


>gi|297798624|ref|XP_002867196.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297313032|gb|EFH43455.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 997

 Score =  453 bits (1166), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 256/694 (36%), Positives = 397/694 (57%), Gaps = 7/694 (1%)

Query: 93  CFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDL 152
           CF   +  +  L  D  T+  VL+ A      ++G  +H  A+  G    L V  +L+++
Sbjct: 309 CFMDMVESD--LECDQVTFILVLATAVRLDSLALGQQVHCMALKLGLDLMLTVSNSLINM 366

Query: 153 YFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTS 212
           Y K   +  AR VF+ M E+D + WNS+I+G+ ++    +++ +F  ++R  G   D  +
Sbjct: 367 YCKLRKIGLARTVFNNMSERDLISWNSVIAGIAQSDLEVEAVCLFMQLLR-CGLKPDHYT 425

Query: 213 VAAVLPAVAEVQE-LRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLF-RD 270
           + +VL A + + E L L  +I    +K       +V T L+  YS+   ++ AE+LF R+
Sbjct: 426 MTSVLKAASSLPEGLSLSKQIHVHAIKTNNVADSFVSTALIDAYSRNRCMKEAEVLFGRN 485

Query: 271 IVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLT 330
               DL++ NAM+SGYT +     +L LF  +    ER +  T+  ++        ++  
Sbjct: 486 --NFDLVAWNAMMSGYTQSHDGHKTLELFALMHKQGERSDDFTLATVLKTCGFLFAINQG 543

Query: 331 NCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQN 390
             +H++ +KSG   +  V + +  +Y +  +M AA+  FD        +W  +I+G  +N
Sbjct: 544 KQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTLISGCIEN 603

Query: 391 GLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVS 450
           G  E A+ +F +M+   V P+  T++++  A + L A+  G+ +H      N  S+ +V 
Sbjct: 604 GEEERALHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTSDPFVG 663

Query: 451 TALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIR 510
           T+L+DMYAKCG+I +A  LF  +   +   WN M+ G   HG G EALQLF +M   GI+
Sbjct: 664 TSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKEALQLFKQMESLGIK 723

Query: 511 PSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALE 570
           P  VTF+ VL ACSH+GLV E  +  +SM  D+G KP  EHY+C+ D LGRAG +++A  
Sbjct: 724 PDKVTFIGVLSACSHSGLVSEAYKYIRSMHRDYGIKPEIEHYSCLADALGRAGLVKEAEN 783

Query: 571 FIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERD 630
            I  +++E   +++  LL AC +  DT   +  + KL EL+P +   +VLLSN+Y+A   
Sbjct: 784 LIDSMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASK 843

Query: 631 YLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMRE 690
           + +    R ++K  K+ K PG + IEV    H+F   D+ +PQ+  IY  ++ +   +++
Sbjct: 844 WDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHLFVVDDRSNPQTELIYKKVKDMIRDIKQ 903

Query: 691 AGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTA 750
            G+  ET   L DVEEEEKE  +  HSEKLA+AFGL++T P T IR+IKNLRVC DCH A
Sbjct: 904 EGYVPETDFTLVDVEEEEKERALYYHSEKLAVAFGLLSTPPSTPIRVIKNLRVCGDCHNA 963

Query: 751 TKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
            K+ISKV  R IV+RDANRFH FK G+CSCGDYW
Sbjct: 964 MKYISKVYDREIVLRDANRFHRFKDGICSCGDYW 997



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 132/502 (26%), Positives = 244/502 (48%), Gaps = 7/502 (1%)

Query: 27  QTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNE 86
           Q H   +  G    L+    L +     +    AR +F ++ + DL  +N +I G + ++
Sbjct: 343 QVHCMALKLGLDLMLTVSNSLINMYCKLRKIGLARTVFNNMSERDLISWNSVIAGIAQSD 402

Query: 87  MPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCD-RSIGVLLHGHAIVSGYGSDLFV 145
           +   ++C +  L +   L PD++T + VL AAS+  +  S+   +H HAI +   +D FV
Sbjct: 403 LEVEAVCLFMQLLR-CGLKPDHYTMTSVLKAASSLPEGLSLSKQIHVHAIKTNNVADSFV 461

Query: 146 GAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGG 205
             AL+D Y +   +K A  +F +    D V WN+M+SG  ++     ++ +F  M + G 
Sbjct: 462 STALIDAYSRNRCMKEAEVLFGR-NNFDLVAWNAMMSGYTQSHDGHKTLELFALMHKQGE 520

Query: 206 TWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAE 265
              D  ++A VL     +  +  G ++    +K G+   ++V +G++  Y KCG++  A+
Sbjct: 521 RS-DDFTLATVLKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQ 579

Query: 266 LLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFG 325
             F  I  PD ++   +ISG   NG+ E +L +F Q+       +  TI  L        
Sbjct: 580 FAFDSIPVPDDVAWTTLISGCIENGEEERALHVFSQMRLMGVLPDEFTIATLAKASSCLT 639

Query: 326 HLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIA 385
            L     IH+  LK    S+  V T+L  +Y++   ++ A  LF      ++ +WNAM+ 
Sbjct: 640 ALEQGRQIHANALKLNCTSDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLV 699

Query: 386 GYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLG-KWVHELVKSRNFE 444
           G  Q+G  +EA+ LF++M++  + P+ VT   +LSAC+  G +S   K++  + +    +
Sbjct: 700 GLAQHGEGKEALQLFKQMESLGIKPDKVTFIGVLSACSHSGLVSEAYKYIRSMHRDYGIK 759

Query: 445 SNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVT-WNTMISGYGLHGHGLEALQLFSE 503
             I   + L D   + G + EA  L D MS ++  + + T+++   + G      ++ ++
Sbjct: 760 PEIEHYSCLADALGRAGLVKEAENLIDSMSMEASASMYRTLLAACRVQGDTETGKRVATK 819

Query: 504 MLH-SGIRPSGVTFLSVLYACS 524
           +L    +  S    LS +YA +
Sbjct: 820 LLELEPLDSSAYVLLSNMYAAA 841



 Score =  175 bits (444), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 152/583 (26%), Positives = 253/583 (43%), Gaps = 67/583 (11%)

Query: 28  THAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNN-- 85
           THA+I+      +   V  L    S   +  YAR +F  +P+ DL  +N I+  ++ +  
Sbjct: 68  THARILALEENPERFLVNNLISMYSKCGSLTYARRVFDKMPERDLVSWNSILAAYAQSSE 127

Query: 86  ---EMPKSSICFYTHLRKNTALTPDNFTYS----FVLSAASACCDRSIGVLLHGHAIVSG 138
              E  K +   +  LR++   T    T S      L +   C   S     HG+A   G
Sbjct: 128 GVVENVKEAFLLFRILRQDVVYTS-RMTLSPMLKLCLHSGYVCASES----FHGYACKIG 182

Query: 139 YGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFG 198
              D FV  ALV++Y KF  VK  R +F++MP +D VLWN M+                 
Sbjct: 183 LDGDDFVAGALVNIYLKFGKVKEGRVLFEEMPYRDVVLWNLMLKAY-------------- 228

Query: 199 DMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDH--------VYVLTG 250
                                      L +G + + + L   FH          + +L+ 
Sbjct: 229 ---------------------------LEMGFKEEAIDLSSAFHTSGLHPNEITLRLLSR 261

Query: 251 LVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVN 310
           +    S+ G+V+  E         ++IS N ++SGY   G+  + L+ F  ++ S    +
Sbjct: 262 ISGDDSEAGQVKSFENGNDASAVSEIISRNKILSGYLHAGQYSALLKCFMDMVESDLECD 321

Query: 311 SSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFD 370
             T + ++        L L   +H   LK G+    +V  +L  +Y +L ++  AR +F+
Sbjct: 322 QVTFILVLATAVRLDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKIGLARTVFN 381

Query: 371 ESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLG-AIS 429
             SE+ L SWN++IAG  Q+ L  EA+ LF ++    + P+  T++S+L A + L   +S
Sbjct: 382 NMSERDLISWNSVIAGIAQSDLEVEAVCLFMQLLRCGLKPDHYTMTSVLKAASSLPEGLS 441

Query: 430 LGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYG 489
           L K +H      N  ++ +VSTALID Y++   + EA  LF   ++   V WN M+SGY 
Sbjct: 442 LSKQIHVHAIKTNNVADSFVSTALIDAYSRNRCMKEAEVLFG-RNNFDLVAWNAMMSGYT 500

Query: 490 LHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLA 549
               G + L+LF+ M   G R    T  +VL  C     + +G ++    I   G+    
Sbjct: 501 QSHDGHKTLELFALMHKQGERSDDFTLATVLKTCGFLFAINQGKQVHAYAIKS-GYDLDL 559

Query: 550 EHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACM 592
              + ++D+  + G +  A      + V P    W  L+  C+
Sbjct: 560 WVSSGILDMYVKCGDMSAAQFAFDSIPV-PDDVAWTTLISGCI 601



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 108/442 (24%), Positives = 195/442 (44%), Gaps = 52/442 (11%)

Query: 115 LSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDT 174
           L  A +  D  +G   H   +      + F+   L+ +Y K   +  AR+VFDKMPE+D 
Sbjct: 53  LRDAISTSDLMLGKCTHARILALEENPERFLVNNLISMYSKCGSLTYARRVFDKMPERDL 112

Query: 175 VLWNSMIS-------GLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELR 227
           V WNS+++       G+++N   +++  +F  ++R    +    +++ +L        + 
Sbjct: 113 VSWNSILAAYAQSSEGVVEN--VKEAFLLF-RILRQDVVYTSRMTLSPMLKLCLHSGYVC 169

Query: 228 LGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYT 287
                     K+G     +V   LV+ Y K G+V+   +LF ++   D++  N M+  Y 
Sbjct: 170 ASESFHGYACKIGLDGDDFVAGALVNIYLKFGKVKEGRVLFEEMPYRDVVLWNLMLKAYL 229

Query: 288 CNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSS 347
             G  E +                               + L++  H+    SG+  N  
Sbjct: 230 EMGFKEEA-------------------------------IDLSSAFHT----SGLHPNEI 254

Query: 348 VLTALSTVY---SRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQ 404
            L  LS +    S   ++++     D S+   + S N +++GY   G     +  F +M 
Sbjct: 255 TLRLLSRISGDDSEAGQVKSFENGNDASAVSEIISRNKILSGYLHAGQYSALLKCFMDMV 314

Query: 405 ASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIV 464
            S +  + VT   +L+   +L +++LG+ VH +      +  + VS +LI+MY K   I 
Sbjct: 315 ESDLECDQVTFILVLATAVRLDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKIG 374

Query: 465 EARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACS 524
            AR +F+ MS +  ++WN++I+G       +EA+ LF ++L  G++P   T  SVL A S
Sbjct: 375 LARTVFNNMSERDLISWNSVIAGIAQSDLEVEAVCLFMQLLRCGLKPDHYTMTSVLKAAS 434

Query: 525 HAGLVREGDEIFQSMIHDHGFK 546
               + EG  +    IH H  K
Sbjct: 435 S---LPEGLSL-SKQIHVHAIK 452



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 80/306 (26%), Positives = 133/306 (43%), Gaps = 23/306 (7%)

Query: 23  SQLTQTHAQIIIHGFQNDL---STVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVII 79
           +Q  Q HA  I  G+  DL   S +  +  +  D  A  +A   F SIP PD   +  +I
Sbjct: 541 NQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFA---FDSIPVPDDVAWTTLI 597

Query: 80  RGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGY 139
            G   N   + ++  ++ +R    L PD FT + +  A+S       G  +H +A+    
Sbjct: 598 SGCIENGEEERALHVFSQMRLMGVL-PDEFTIATLAKASSCLTALEQGRQIHANALKLNC 656

Query: 140 GSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGD 199
            SD FVG +LVD+Y K   +  A  +F ++   +   WN+M+ GL ++   ++++ +F  
Sbjct: 657 TSDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKEALQLFKQ 716

Query: 200 MVRNGGTWLDSTSVAAVLPAVAEVQELRLGME-IQCLGLKLGFHDHVYVLTGLVSFYSKC 258
           M  + G   D  +   VL A +    +    + I+ +    G    +   + L     + 
Sbjct: 717 M-ESLGIKPDKVTFIGVLSACSHSGLVSEAYKYIRSMHRDYGIKPEIEHYSCLADALGRA 775

Query: 259 GEVERAELLFRDIVRPDLISCNAMISGY-------TCNGKTESSLRLFRQLLASAERVNS 311
           G V+ AE L       D +S  A  S Y          G TE+  R+  +LL   E ++S
Sbjct: 776 GLVKEAENLI------DSMSMEASASMYRTLLAACRVQGDTETGKRVATKLL-ELEPLDS 828

Query: 312 STIVGL 317
           S  V L
Sbjct: 829 SAYVLL 834


>gi|449449306|ref|XP_004142406.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Cucumis sativus]
          Length = 782

 Score =  453 bits (1166), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 265/771 (34%), Positives = 402/771 (52%), Gaps = 98/771 (12%)

Query: 111 YSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMP 170
           ++ +L  +    D   G  +H   I  G    +++   L+  Y K   ++ A  VFD+MP
Sbjct: 13  FAHILQTSVRIKDPFAGRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGSLRFAHHVFDEMP 72

Query: 171 EKDTVLWNSMISGL---------------MKNC----------------CFQDSIWVFGD 199
            K T  WN++ISG                M +C                 F ++IW+F  
Sbjct: 73  LKSTFSWNTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWMFAK 132

Query: 200 MVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCG 259
           M+          +V+ VL + A  Q L +G +I    +KLG    V V T L++ Y+KCG
Sbjct: 133 MISERVP-PSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKCG 191

Query: 260 -------------------------------EVERAELLFRDIVRPDLISCNAMISGYTC 288
                                          + E A   F  +   D++S N+MISGY+ 
Sbjct: 192 DPVIAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQ 251

Query: 289 NGKTESSLRLFRQLLASAE-RVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLK-----SGI 342
            G    +L +F ++L     + ++ T+  ++        L++   IH++ L+     SG 
Sbjct: 252 QGYNLEALVIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSGA 311

Query: 343 VSNSSV----------------------------LTALSTVYSRLNEMEAARKLFDESSE 374
           V N+ +                             T+L   Y++L  ++ AR++F++  +
Sbjct: 312 VGNALISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRD 371

Query: 375 KSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWV 434
           + + +W AMI GY QNGL  +A+ LF+ M      PN  T++++LS  + L  +  GK +
Sbjct: 372 RDVVAWTAMIVGYVQNGLWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQI 431

Query: 435 HELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSE-VTWNTMISGYGLHGH 493
           H         S   V+ ALI MYAK GNI  A+ +FDL + K E V+W +MI     HG 
Sbjct: 432 HASAIKAGESSTPSVTNALIAMYAKTGNINVAKRVFDLPNGKKEIVSWTSMIMALAQHGL 491

Query: 494 GLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYA 553
           G EA+ LF  ML  G++P  +T++ VL AC+H GLV +G + +  M   H  +P   HYA
Sbjct: 492 GKEAINLFERMLSVGMKPDHITYVGVLSACTHVGLVEQGRKYYNMMTEVHEIEPTLSHYA 551

Query: 554 CMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPE 613
           CM+D+ GRAG L++A  FI+ + +EP    WG+LL +C IHK+ +LA+VA+E+L  +DP 
Sbjct: 552 CMIDLYGRAGLLQEAYLFIESMPIEPDNIAWGSLLASCKIHKNADLAKVAAERLLLIDPG 611

Query: 614 NVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQ 673
           N G ++ L+N+YSA   +  AA  R+++K R + K  G + I +    H F   D +HPQ
Sbjct: 612 NSGAYLALANVYSACGKWENAAQTRKLMKDRGVRKEKGISWIHIKNEVHAFGVEDVIHPQ 671

Query: 674 STAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGT 733
              IY ++ ++  ++++ GF  +T + LHD+EEE KE ++K HSEKLAIAFGL+ T   T
Sbjct: 672 KDEIYKLMAEIWEEIKKMGFIPDTESVLHDLEEEVKEQILKYHSEKLAIAFGLLNTPENT 731

Query: 734 EIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
            +RI+KNLRVC DCH+A KFISK+ GR I+VRDA RFHHFK G CSC DYW
Sbjct: 732 ALRIMKNLRVCNDCHSAIKFISKLVGREIIVRDATRFHHFKDGSCSCRDYW 782



 Score =  169 bits (427), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 127/499 (25%), Positives = 223/499 (44%), Gaps = 68/499 (13%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           +R L + +P  D   +  II G++   +  ++I  +  +  +  + P  FT S VLS+ +
Sbjct: 95  SRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWMFAKM-ISERVPPSQFTVSNVLSSCA 153

Query: 120 ACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFD------------ 167
           A     IG  +H   +  G GS + V  +L+++Y K      A+ VFD            
Sbjct: 154 ANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKCGDPVIAKVVFDRMTVKNISTWNA 213

Query: 168 -------------------KMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWL 208
                              KMP++D V WNSMISG  +     +++ +F  M+       
Sbjct: 214 LISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQGYNLEALVIFSKMLNEPSLKP 273

Query: 209 DSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAEL-- 266
           D+ ++A++L A A +++L +G +I    L+        V   L+S Y+K G VE A L  
Sbjct: 274 DNFTLASILSACANLEKLNIGKQIHAYILRAETETSGAVGNALISMYAKSGGVEIARLIV 333

Query: 267 -------------------------------LFRDIVRPDLISCNAMISGYTCNGKTESS 295
                                          +F  +   D+++  AMI GY  NG    +
Sbjct: 334 EHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDRDVVAWTAMIVGYVQNGLWNDA 393

Query: 296 LRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTV 355
           L LFR ++      NS T+  ++ V      L     IH+  +K+G  S  SV  AL  +
Sbjct: 394 LELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQIHASAIKAGESSTPSVTNALIAM 453

Query: 356 YSRLNEMEAARKLFD-ESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVT 414
           Y++   +  A+++FD  + +K + SW +MI    Q+GL +EAI+LF+ M +  + P+ +T
Sbjct: 454 YAKTGNINVAKRVFDLPNGKKEIVSWTSMIMALAQHGLGKEAINLFERMLSVGMKPDHIT 513

Query: 415 VSSILSACAQLGAISLG-KWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLM 473
              +LSAC  +G +  G K+ + + +    E  +     +ID+Y + G + EA    + M
Sbjct: 514 YVGVLSACTHVGLVEQGRKYYNMMTEVHEIEPTLSHYACMIDLYGRAGLLQEAYLFIESM 573

Query: 474 S-HKSEVTWNTMISGYGLH 491
                 + W ++++   +H
Sbjct: 574 PIEPDNIAWGSLLASCKIH 592



 Score =  142 bits (358), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 111/433 (25%), Positives = 180/433 (41%), Gaps = 96/433 (22%)

Query: 204 GGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVER 263
           G +   S   A +L     +++   G  + C  +K G H  VY++  L++FY+K G +  
Sbjct: 4   GNSPTSSEFFAHILQTSVRIKDPFAGRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGSLRF 63

Query: 264 AELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVG------- 316
           A  +F ++      S N +ISGY   G  E S RL  ++        ++ IVG       
Sbjct: 64  AHHVFDEMPLKSTFSWNTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLF 123

Query: 317 ---------LIPVFYPFGHLHLTNC---------------IHSFCLKSGI---------- 342
                    +I    P     ++N                IHSF +K G+          
Sbjct: 124 DNAIWMFAKMISERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSL 183

Query: 343 ---------------------VSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWN 381
                                V N S   AL ++Y +  + E A   F++  ++ + SWN
Sbjct: 184 LNMYAKCGDPVIAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWN 243

Query: 382 AMIAGYTQNGLTEEAISLFQEM-QASKVAPNPVTVSSILSACAQLGAISLGKWVHELV-- 438
           +MI+GY+Q G   EA+ +F +M     + P+  T++SILSACA L  +++GK +H  +  
Sbjct: 244 SMISGYSQQGYNLEALVIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQIHAYILR 303

Query: 439 -------------------------------KSRNFESNIYVSTALIDMYAKCGNIVEAR 467
                                           +R    NI   T+L+D Y K GN+  AR
Sbjct: 304 AETETSGAVGNALISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAR 363

Query: 468 ELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAG 527
           E+F+ +  +  V W  MI GY  +G   +AL+LF  M++ G  P+  T  ++L   S   
Sbjct: 364 EIFNKLRDRDVVAWTAMIVGYVQNGLWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLT 423

Query: 528 LVREGDEIFQSMI 540
           ++  G +I  S I
Sbjct: 424 ILEHGKQIHASAI 436



 Score =  116 bits (290), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 109/455 (23%), Positives = 201/455 (44%), Gaps = 77/455 (16%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           A + F  +P  D+  +N +I G+S       ++  ++ +    +L PDNFT + +LSA +
Sbjct: 227 AASQFEKMPDRDIVSWNSMISGYSQQGYNLEALVIFSKMLNEPSLKPDNFTLASILSACA 286

Query: 120 ACCDRSIGVLLH--------------GHAIVSGYGS-------------------DLFVG 146
                +IG  +H              G+A++S Y                     ++   
Sbjct: 287 NLEKLNIGKQIHAYILRAETETSGAVGNALISMYAKSGGVEIARLIVEHNRTSNLNIIAF 346

Query: 147 AALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGT 206
            +L+D Y K   VK AR++F+K+ ++D V W +MI G ++N  + D++ +F  MV N G 
Sbjct: 347 TSLLDGYTKLGNVKPAREIFNKLRDRDVVAWTAMIVGYVQNGLWNDALELFRLMV-NEGP 405

Query: 207 WLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAEL 266
             +S ++AA+L   + +  L  G +I    +K G      V   L++ Y+K G +  A+ 
Sbjct: 406 EPNSYTLAAMLSVSSSLTILEHGKQIHASAIKAGESSTPSVTNALIAMYAKTGNINVAKR 465

Query: 267 LFRDIV--RPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPF 324
           +F D+   + +++S  +MI     +G  + ++ LF ++L+   + +  T VG+       
Sbjct: 466 VF-DLPNGKKEIVSWTSMIMALAQHGLGKEAINLFERMLSVGMKPDHITYVGV------- 517

Query: 325 GHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMI 384
               L+ C H   ++ G              Y+ + E+           E +L+ +  MI
Sbjct: 518 ----LSACTHVGLVEQG-----------RKYYNMMTEVHEI--------EPTLSHYACMI 554

Query: 385 AGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHE---LVKSR 441
             Y + GL +EA    + M    + P+ +   S+L++C       L K   E   L+   
Sbjct: 555 DLYGRAGLLQEAYLFIESM---PIEPDNIAWGSLLASCKIHKNADLAKVAAERLLLIDPG 611

Query: 442 NFESNIYVSTALIDMYAKCGNIVEARELFDLMSHK 476
           N  S  Y+  AL ++Y+ CG    A +   LM  +
Sbjct: 612 N--SGAYL--ALANVYSACGKWENAAQTRKLMKDR 642


>gi|297848224|ref|XP_002891993.1| hypothetical protein ARALYDRAFT_337864 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297337835|gb|EFH68252.1| hypothetical protein ARALYDRAFT_337864 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 950

 Score =  453 bits (1166), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 247/659 (37%), Positives = 377/659 (57%), Gaps = 31/659 (4%)

Query: 148 ALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMV-RNGGT 206
           ++V  YF     + AR++FD+MPE++ V WN ++SG +KN   +++  VF  M  RN  +
Sbjct: 53  SIVSGYFANGLPREARQMFDEMPERNIVSWNGLVSGYIKNRMIEEARNVFEIMPERNVVS 112

Query: 207 WLDSTSVAAVLPAVAEVQELRLGM----EIQCLGLKLGFHD-----------------HV 245
           W            V E + L   M    E+    +  G  D                  V
Sbjct: 113 WTAMVKGYVQEGMVVEAELLFWRMPERNEVSWTVMFGGLIDGGRIDDARKLYDMMPGKDV 172

Query: 246 YVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLAS 305
              T ++    + G V+ A  +F ++   ++I+   MI+GY  N + + + +LF  +   
Sbjct: 173 VASTNMIGGLCREGRVDEAREIFDEMRERNVITWTTMITGYGQNKRVDVARKLFEVMPEK 232

Query: 306 AERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAA 365
            E   +S ++G    +   G +              +++ ++++ AL  V     E+  A
Sbjct: 233 TEVSWTSMLLG----YTLSGRIEDAEEFFEVMPMKPVIACNAMIVALGEV----GEIVKA 284

Query: 366 RKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQL 425
           R++FD+  ++  A+W  MI  Y + G   EA+ LF +MQ   V P+  ++ SILS CA L
Sbjct: 285 RRVFDQMEDRDNATWRGMIKAYERKGFELEALELFAQMQRQGVRPSFPSLISILSVCATL 344

Query: 426 GAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMI 485
            ++  G+ VH  +    F+ ++YV++ L+ MY KCG +V+A+ +FD    K  + WN++I
Sbjct: 345 ASLQYGRQVHAHLVRCQFDGDVYVASVLMTMYVKCGELVKAKLVFDRFPSKDIIMWNSII 404

Query: 486 SGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGF 545
           SGY  HG G EAL++F EM  SG  P+ VT +++L ACS+ G + EG EIF+SM      
Sbjct: 405 SGYASHGLGEEALKVFHEMPLSGTMPNKVTLIAILTACSYGGKLEEGLEIFESMESKFCV 464

Query: 546 KPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASE 605
            P  EHY+C VD+LGRAG+++KA+E I  + ++P   VWGALLGAC  H   +LA VA++
Sbjct: 465 TPTVEHYSCTVDMLGRAGKVDKAMELINSMTIKPDATVWGALLGACKTHSRLDLAEVAAK 524

Query: 606 KLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFT 665
           KLFE++PEN G ++LLS+I ++   +   A +R+ ++ + ++K PGC+ IEVG   H+FT
Sbjct: 525 KLFEIEPENAGPYILLSSINASRSKWGDVAEMRKNMRTKNVSKFPGCSWIEVGKKVHMFT 584

Query: 666 SGD-QLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAF 724
            G  + HP+   I  MLEK +G +REAG+  +    LHDV+EEEK   +  HSE+LA+A+
Sbjct: 585 RGGIRNHPEQAMILMMLEKTDGLLREAGYSPDCSHVLHDVDEEEKVDSLSRHSERLAVAY 644

Query: 725 GLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDY 783
           GL+    G  IR++KNLRVC DCH A K ISKVT R I++RDANRFHHF  G CSC DY
Sbjct: 645 GLLKLPEGVPIRVMKNLRVCGDCHAAIKLISKVTEREIILRDANRFHHFNNGECSCRDY 703



 Score =  119 bits (297), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 99/456 (21%), Positives = 193/456 (42%), Gaps = 33/456 (7%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEM-----------PKSSICFYTHLRKNTA----L 104
           AR +F  +P+ ++  +N ++ G+  N M           P+ ++  +T + K       +
Sbjct: 67  ARQMFDEMPERNIVSWNGLVSGYIKNRMIEEARNVFEIMPERNVVSWTAMVKGYVQEGMV 126

Query: 105 TPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGY-------GSDLFVGAALVDLYFKFS 157
                 +  +            G L+ G  I           G D+     ++    +  
Sbjct: 127 VEAELLFWRMPERNEVSWTVMFGGLIDGGRIDDARKLYDMMPGKDVVASTNMIGGLCREG 186

Query: 158 WVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVL 217
            V  AR++FD+M E++ + W +MI+G  +N     +  +F  M     T +  TS+    
Sbjct: 187 RVDEAREIFDEMRERNVITWTTMITGYGQNKRVDVARKLFEVMPEK--TEVSWTSMLLGY 244

Query: 218 PAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLI 277
                +++     E+  +         V     ++    + GE+ +A  +F  +   D  
Sbjct: 245 TLSGRIEDAEEFFEVMPM-------KPVIACNAMIVALGEVGEIVKARRVFDQMEDRDNA 297

Query: 278 SCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFC 337
           +   MI  Y   G    +L LF Q+     R +  +++ ++ V      L     +H+  
Sbjct: 298 TWRGMIKAYERKGFELEALELFAQMQRQGVRPSFPSLISILSVCATLASLQYGRQVHAHL 357

Query: 338 LKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAI 397
           ++     +  V + L T+Y +  E+  A+ +FD    K +  WN++I+GY  +GL EEA+
Sbjct: 358 VRCQFDGDVYVASVLMTMYVKCGELVKAKLVFDRFPSKDIIMWNSIISGYASHGLGEEAL 417

Query: 398 SLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSR-NFESNIYVSTALIDM 456
            +F EM  S   PN VT+ +IL+AC+  G +  G  + E ++S+      +   +  +DM
Sbjct: 418 KVFHEMPLSGTMPNKVTLIAILTACSYGGKLEEGLEIFESMESKFCVTPTVEHYSCTVDM 477

Query: 457 YAKCGNIVEARELFDLMSHKSEVT-WNTMISGYGLH 491
             + G + +A EL + M+ K + T W  ++     H
Sbjct: 478 LGRAGKVDKAMELINSMTIKPDATVWGALLGACKTH 513



 Score =  102 bits (254), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 90/361 (24%), Positives = 155/361 (42%), Gaps = 66/361 (18%)

Query: 237 LKLGFHDHVYVLTGL-----VSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGK 291
           LKL  H      TG+     +S  S+ G++  A   F  +    + S N+++SGY  NG 
Sbjct: 4   LKLILHRAYSTSTGVNNSFEISRLSRIGQINEARKFFDSLRYKAIGSWNSIVSGYFANGL 63

Query: 292 TESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTA 351
              + ++F ++    ER                      N +    L SG + N  +   
Sbjct: 64  PREARQMFDEM---PER----------------------NIVSWNGLVSGYIKNRMI--- 95

Query: 352 LSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPN 411
                      E AR +F+   E+++ SW AM+ GY Q G+  EA  LF  M       N
Sbjct: 96  -----------EEARNVFEIMPERNVVSWTAMVKGYVQEGMVVEAELLFWRMPER----N 140

Query: 412 PVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFD 471
            V+ + +       G I   + +++++  +    ++  ST +I    + G + EARE+FD
Sbjct: 141 EVSWTVMFGGLIDGGRIDDARKLYDMMPGK----DVVASTNMIGGLCREGRVDEAREIFD 196

Query: 472 LMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVRE 531
            M  ++ +TW TMI+GYG +     A +LF  M       + V++ S+L   + +G + +
Sbjct: 197 EMRERNVITWTTMITGYGQNKRVDVARKLFEVMPEK----TEVSWTSMLLGYTLSGRIED 252

Query: 532 GDEIFQSMIHDHGFKPLAEHYAC--MVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLG 589
            +E F+ M       P+    AC  M+  LG  G++ KA      +  +   A W  ++ 
Sbjct: 253 AEEFFEVM-------PMKPVIACNAMIVALGEVGEIVKARRVFDQME-DRDNATWRGMIK 304

Query: 590 A 590
           A
Sbjct: 305 A 305



 Score = 89.7 bits (221), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 80/379 (21%), Positives = 167/379 (44%), Gaps = 24/379 (6%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           AR +F  + + ++  +  +I G+  N+    +   +  + + T ++  +    + LS   
Sbjct: 191 AREIFDEMRERNVITWTTMITGYGQNKRVDVARKLFEVMPEKTEVSWTSMLLGYTLSGRI 250

Query: 120 ACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNS 179
              +    V+     I            A++    +   +  AR+VFD+M ++D   W  
Sbjct: 251 EDAEEFFEVMPMKPVIACN---------AMIVALGEVGEIVKARRVFDQMEDRDNATWRG 301

Query: 180 MISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKL 239
           MI    +     +++ +F  M R G       S+ ++L   A +  L+ G ++    ++ 
Sbjct: 302 MIKAYERKGFELEALELFAQMQRQG-VRPSFPSLISILSVCATLASLQYGRQVHAHLVRC 360

Query: 240 GFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLF 299
            F   VYV + L++ Y KCGE+ +A+L+F      D+I  N++ISGY  +G  E +L++F
Sbjct: 361 QFDGDVYVASVLMTMYVKCGELVKAKLVFDRFPSKDIIMWNSIISGYASHGLGEEALKVF 420

Query: 300 RQLLASAERVNSSTIVGLIPVFYPFGHLH-----LTNCIHSFCLKSGIVSNSSVLTALST 354
            ++  S    N  T++ ++      G L        +    FC+   +   S  +  L  
Sbjct: 421 HEMPLSGTMPNKVTLIAILTACSYGGKLEEGLEIFESMESKFCVTPTVEHYSCTVDML-- 478

Query: 355 VYSRLNEMEAARKLFDESSEKSLAS-WNAMIAG---YTQNGLTEEAISLFQEMQASKVAP 410
              R  +++ A +L +  + K  A+ W A++     +++  L E A     E++     P
Sbjct: 479 --GRAGKVDKAMELINSMTIKPDATVWGALLGACKTHSRLDLAEVAAKKLFEIEPENAGP 536

Query: 411 NPVTVSSILSACAQLGAIS 429
             + +SSI ++ ++ G ++
Sbjct: 537 Y-ILLSSINASRSKWGDVA 554


>gi|357507131|ref|XP_003623854.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355498869|gb|AES80072.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 865

 Score =  453 bits (1165), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 247/675 (36%), Positives = 380/675 (56%), Gaps = 36/675 (5%)

Query: 145 VGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNG 204
           +G  L+ +         AR++FD +P+ D    +++IS L  +    ++I ++  +   G
Sbjct: 100 LGLRLIRVALNVGDFNRARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQERG 159

Query: 205 GTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERA 264
                   +AA          LR+  E+     + G    V+V   L+  Y KC  VE A
Sbjct: 160 IKPDMPVFLAAAKACAVSGDALRVK-EVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGA 218

Query: 265 ELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPF 324
             +F D+V  D++S  ++ S Y   G     + +FR++  S  + N  T+  ++P     
Sbjct: 219 RRVFDDLVVRDVVSWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAEL 278

Query: 325 GHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFD-------------- 370
             L     IH F ++ G+V N  V +AL ++Y++   +  AR +FD              
Sbjct: 279 KDLKSGKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVL 338

Query: 371 ------ESSEKSL---------------ASWNAMIAGYTQNGLTEEAISLFQEMQASKVA 409
                 +  EK                 A+WNA+I G  +NG +EEA+ +F++MQ     
Sbjct: 339 TAYFKNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVEMFRKMQKMGFK 398

Query: 410 PNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEAREL 469
           PN +T+SSIL AC+    + +GK +H  V       ++  +TAL+ MYAKCG++  +R +
Sbjct: 399 PNEITISSILPACSFSENLRMGKEIHCYVFRHWKVGDLTSTTALLYMYAKCGDLNLSRNV 458

Query: 470 FDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLV 529
           FD+M  K  V WNTMI    +HG+G EAL LF +ML S ++P+ VTF  VL  CSH+ LV
Sbjct: 459 FDMMRRKDVVAWNTMIIANAMHGNGKEALFLFDKMLLSRVQPNSVTFTGVLSGCSHSRLV 518

Query: 530 REGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLG 589
            EG +IF SM  DH  +P A HY+C+VDI  RAG+L +A +FI+G+ +EP  + WGALL 
Sbjct: 519 EEGVQIFNSMGRDHLVEPDANHYSCVVDIYSRAGRLNEAYKFIQGMPMEPTASAWGALLA 578

Query: 590 ACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKA 649
           AC ++K+  LA+++++KLFE++P N G +V L NI    + + +A+ VR ++K+R + K 
Sbjct: 579 ACRVYKNVELAKISAKKLFEIEPNNPGNYVSLFNILVTAKMWSEASQVRILMKERGITKT 638

Query: 650 PGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEK 709
           PGC+ ++VG   H F  GD+ + +S  IY  L++L  KM+ AG++ +T   L D+++EEK
Sbjct: 639 PGCSWLQVGNKVHTFVVGDKSNIESDKIYNFLDELVEKMKMAGYKPDTDYVLQDIDQEEK 698

Query: 710 ELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANR 769
              +  HSEKLA+AFG++     + IR+ KNLR+C DCH A K++SKV G +IVVRD+ R
Sbjct: 699 AESLCNHSEKLAVAFGILNLNGQSTIRVFKNLRICGDCHNAIKYMSKVVGVIIVVRDSLR 758

Query: 770 FHHFKGGVCSCGDYW 784
           FHHFK G CSC D W
Sbjct: 759 FHHFKNGNCSCKDLW 773



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 131/485 (27%), Positives = 235/485 (48%), Gaps = 50/485 (10%)

Query: 44  VTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTA 103
           + ++A  + DF     AR LF +IP+PD    + +I   + + +   +I  Y+ L++   
Sbjct: 104 LIRVALNVGDFNR---ARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQER-G 159

Query: 104 LTPDNFTYSFVLSAASACCDRSIGVL---LHGHAIVSGYGSDLFVGAALVDLYFKFSWVK 160
           + PD   +   L+AA AC      +    +H  A   G  SD+FVG AL+  Y K   V+
Sbjct: 160 IKPDMPVF---LAAAKACAVSGDALRVKEVHDDATRCGVMSDVFVGNALIHAYGKCKCVE 216

Query: 161 SARKVFDKMPEKDTVLWNSMISGLMKNCCF-QDSIWVFGDMVRNGGTWLDSTSVAAVLPA 219
            AR+VFD +  +D V W S+ S  +K C F +  + VF +M  + G   +  +V+++LPA
Sbjct: 217 GARRVFDDLVVRDVVSWTSLSSCYVK-CGFPRKGMDVFREMGWS-GVKPNPMTVSSILPA 274

Query: 220 VAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLF----------- 268
            AE+++L+ G EI    ++ G   +++V + LVS Y+KC  V  A ++F           
Sbjct: 275 CAELKDLKSGKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHRDVVSW 334

Query: 269 ------------------------RDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLA 304
                                   RD VR D  + NA+I G   NG++E ++ +FR++  
Sbjct: 335 NGVLTAYFKNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVEMFRKMQK 394

Query: 305 SAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEA 364
              + N  TI  ++P      +L +   IH +  +   V + +  TAL  +Y++  ++  
Sbjct: 395 MGFKPNEITISSILPACSFSENLRMGKEIHCYVFRHWKVGDLTSTTALLYMYAKCGDLNL 454

Query: 365 ARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQ 424
           +R +FD    K + +WN MI     +G  +EA+ LF +M  S+V PN VT + +LS C+ 
Sbjct: 455 SRNVFDMMRRKDVVAWNTMIIANAMHGNGKEALFLFDKMLLSRVQPNSVTFTGVLSGCSH 514

Query: 425 LGAISLGKWV-HELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVT-WN 482
              +  G  + + + +    E +    + ++D+Y++ G + EA +    M  +   + W 
Sbjct: 515 SRLVEEGVQIFNSMGRDHLVEPDANHYSCVVDIYSRAGRLNEAYKFIQGMPMEPTASAWG 574

Query: 483 TMISG 487
            +++ 
Sbjct: 575 ALLAA 579



 Score =  113 bits (282), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 97/410 (23%), Positives = 173/410 (42%), Gaps = 59/410 (14%)

Query: 24  QLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFS 83
           ++ + H      G  +D+     L H     K    AR +F  +   D+  +  +   + 
Sbjct: 182 RVKEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGARRVFDDLVVRDVVSWTSLSSCYV 241

Query: 84  NNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDL 143
               P+  +  +  +   + + P+  T S +L A +   D   G  +HG A+  G   +L
Sbjct: 242 KCGFPRKGMDVFREMGW-SGVKPNPMTVSSILPACAELKDLKSGKEIHGFAVRHGMVVNL 300

Query: 144 FVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRN 203
           FV +ALV LY K   V+ AR VFD MP +D V WN +++   KN  ++    +F  M R+
Sbjct: 301 FVCSALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVLTAYFKNKEYEKGFSLFLKMSRD 360

Query: 204 G-----GTW-----------------------------LDSTSVAAVLPAVAEVQELRLG 229
           G      TW                              +  +++++LPA +  + LR+G
Sbjct: 361 GVRADEATWNAVIGGCMENGRSEEAVEMFRKMQKMGFKPNEITISSILPACSFSENLRMG 420

Query: 230 MEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCN 289
            EI C   +      +   T L+  Y+KCG++  +  +F  + R D+++ N MI     +
Sbjct: 421 KEIHCYVFRHWKVGDLTSTTALLYMYAKCGDLNLSRNVFDMMRRKDVVAWNTMIIANAMH 480

Query: 290 GKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSV- 348
           G  + +L LF ++L S  + NS T  G+           L+ C HS  ++ G+   +S+ 
Sbjct: 481 GNGKEALFLFDKMLLSRVQPNSVTFTGV-----------LSGCSHSRLVEEGVQIFNSMG 529

Query: 349 -----------LTALSTVYSRLNEMEAARKLFD-ESSEKSLASWNAMIAG 386
                       + +  +YSR   +  A K       E + ++W A++A 
Sbjct: 530 RDHLVEPDANHYSCVVDIYSRAGRLNEAYKFIQGMPMEPTASAWGALLAA 579


>gi|15217508|ref|NP_172412.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806401|sp|Q56XI1.2|PPR25_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09410
 gi|3482916|gb|AAC33201.1| Hypothetical protein [Arabidopsis thaliana]
 gi|91805759|gb|ABE65608.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332190317|gb|AEE28438.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 705

 Score =  453 bits (1165), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 244/663 (36%), Positives = 384/663 (57%), Gaps = 36/663 (5%)

Query: 148 ALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMV-RNGGT 206
           ++V  YF     + ARK+FD+MP+++ + WN ++SG MKN    ++  VF  M  RN  +
Sbjct: 53  SMVAGYFANLMPRDARKLFDEMPDRNIISWNGLVSGYMKNGEIDEARKVFDLMPERNVVS 112

Query: 207 WL-----------------------DSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHD 243
           W                        +   V+  +  +  +Q+ R+  +  C   ++    
Sbjct: 113 WTALVKGYVHNGKVDVAESLFWKMPEKNKVSWTVMLIGFLQDGRI--DDACKLYEMIPDK 170

Query: 244 HVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLL 303
                T ++    K G V+ A  +F ++    +I+   M++GY  N + + + ++F  + 
Sbjct: 171 DNIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMP 230

Query: 304 ASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEME 363
              E   +S ++G    +   G +     +        +++ +++++ L     +  E+ 
Sbjct: 231 EKTEVSWTSMLMG----YVQNGRIEDAEELFEVMPVKPVIACNAMISGLG----QKGEIA 282

Query: 364 AARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACA 423
            AR++FD   E++ ASW  +I  + +NG   EA+ LF  MQ   V P   T+ SILS CA
Sbjct: 283 KARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCA 342

Query: 424 QLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNT 483
            L ++  GK VH  +    F+ ++YV++ L+ MY KCG +V+++ +FD    K  + WN+
Sbjct: 343 SLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNS 402

Query: 484 MISGYGLHGHGLEALQLFSEMLHSG-IRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHD 542
           +ISGY  HG G EAL++F EM  SG  +P+ VTF++ L ACS+AG+V EG +I++SM   
Sbjct: 403 IISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESV 462

Query: 543 HGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARV 602
            G KP+  HYACMVD+LGRAG+  +A+E I  + VEP  AVWG+LLGAC  H   ++A  
Sbjct: 463 FGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQLDVAEF 522

Query: 603 ASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPH 662
            ++KL E++PEN G ++LLSN+Y+++  +   A +R+++K R + K+PGC+  EV    H
Sbjct: 523 CAKKLIEIEPENSGTYILLSNMYASQGRWADVAELRKLMKTRLVRKSPGCSWTEVENKVH 582

Query: 663 VFTSGD-QLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLA 721
            FT G    HP+  +I  +L++L+G +REAG+  +   ALHDV+EEEK   +K HSE+LA
Sbjct: 583 AFTRGGINSHPEQESILKILDELDGLLREAGYNPDCSYALHDVDEEEKVNSLKYHSERLA 642

Query: 722 IAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCG 781
           +A+ L+    G  IR++KNLRVC DCHTA K ISKV  R I++RDANRFHHF+ G CSC 
Sbjct: 643 VAYALLKLSEGIPIRVMKNLRVCSDCHTAIKIISKVKEREIILRDANRFHHFRNGECSCK 702

Query: 782 DYW 784
           DYW
Sbjct: 703 DYW 705



 Score =  129 bits (323), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 98/384 (25%), Positives = 171/384 (44%), Gaps = 58/384 (15%)

Query: 159 VKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMV-RNGGTWLDSTSVAAVL 217
           +  ARK+FD    K    WNSM++G   N   +D+  +F +M  RN  +W          
Sbjct: 33  IHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPDRNIISW---------- 82

Query: 218 PAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLI 277
                                           GLVS Y K GE++ A  +F  +   +++
Sbjct: 83  -------------------------------NGLVSGYMKNGEIDEARKVFDLMPERNVV 111

Query: 278 SCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFC 337
           S  A++ GY  NGK + +  LF ++    E+   S  V LI  F   G +     ++   
Sbjct: 112 SWTALVKGYVHNGKVDVAESLFWKM---PEKNKVSWTVMLIG-FLQDGRIDDACKLYEMI 167

Query: 338 LKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAI 397
                ++ +S++  L     +   ++ AR++FDE SE+S+ +W  M+ GY QN   ++A 
Sbjct: 168 PDKDNIARTSMIHGL----CKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDAR 223

Query: 398 SLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMY 457
            +F  M         V+ +S+L    Q G I   + + E++  +     +    A+I   
Sbjct: 224 KIFDVMPEK----TEVSWTSMLMGYVQNGRIEDAEELFEVMPVK----PVIACNAMISGL 275

Query: 458 AKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFL 517
            + G I +AR +FD M  +++ +W T+I  +  +G  LEAL LF  M   G+RP+  T +
Sbjct: 276 GQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLI 335

Query: 518 SVLYACSHAGLVREGDEIFQSMIH 541
           S+L  C+    +  G ++   ++ 
Sbjct: 336 SILSVCASLASLHHGKQVHAQLVR 359



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 90/339 (26%), Positives = 153/339 (45%), Gaps = 61/339 (17%)

Query: 252 VSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNS 311
           ++  S+ G++  A  LF       + S N+M++GY  N     + +LF ++    +R   
Sbjct: 24  ITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEM---PDR--- 77

Query: 312 STIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDE 371
                              N I    L SG + N               E++ ARK+FD 
Sbjct: 78  -------------------NIISWNGLVSGYMKNG--------------EIDEARKVFDL 104

Query: 372 SSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLG 431
             E+++ SW A++ GY  NG  + A SLF +M       N V+ + +L    Q G I   
Sbjct: 105 MPERNVVSWTALVKGYVHNGKVDVAESLFWKMPEK----NKVSWTVMLIGFLQDGRIDDA 160

Query: 432 KWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLH 491
             ++E++  ++   NI   T++I    K G + EARE+FD MS +S +TW TM++GYG +
Sbjct: 161 CKLYEMIPDKD---NI-ARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQN 216

Query: 492 GHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEH 551
               +A ++F  M       + V++ S+L      G + + +E+F+ M       P+   
Sbjct: 217 NRVDDARKIFDVMPEK----TEVSWTSMLMGYVQNGRIEDAEELFEVM-------PVKPV 265

Query: 552 YAC--MVDILGRAGQLEKALEFIKGLAVEPGPAVWGALL 588
            AC  M+  LG+ G++ KA      +  E   A W  ++
Sbjct: 266 IACNAMISGLGQKGEIAKARRVFDSMK-ERNDASWQTVI 303



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 39/173 (22%), Positives = 84/173 (48%), Gaps = 1/173 (0%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           AR +F S+ + +   +  +I+    N     ++  +  ++K   + P   T   +LS  +
Sbjct: 284 ARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQ-GVRPTFPTLISILSVCA 342

Query: 120 ACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNS 179
           +      G  +H   +   +  D++V + L+ +Y K   +  ++ +FD+ P KD ++WNS
Sbjct: 343 SLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNS 402

Query: 180 MISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEI 232
           +ISG   +   ++++ VF +M  +G T  +  +  A L A +    +  G++I
Sbjct: 403 IISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKI 455


>gi|296086269|emb|CBI31710.3| unnamed protein product [Vitis vinifera]
          Length = 649

 Score =  452 bits (1164), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 252/666 (37%), Positives = 359/666 (53%), Gaps = 76/666 (11%)

Query: 119 SACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWN 178
           S+C   +  + +H   IVSG+     +   L++LY  F     AR VFD  P    +LWN
Sbjct: 60  SSCKHLNPLLQIHAQIIVSGFKHHHSI-THLINLYSLFHKCDLARSVFDSTPNPSRILWN 118

Query: 179 SMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLK 238
           SMI    ++  + +++ ++  MV  GG   D                             
Sbjct: 119 SMIRAYTRSKQYNEALEMYYCMVEKGGLERD----------------------------- 149

Query: 239 LGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRL 298
                 V++  GLV  YSK G+++RA  +F  + + D+++ NAMI+G + +     + R+
Sbjct: 150 ------VFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPYVARRV 203

Query: 299 FRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSR 358
           F Q++   + V+  T++                        +G   N   +  L      
Sbjct: 204 FDQMV-DQDDVSWGTMM------------------------AGYAHNGCFVEVL------ 232

Query: 359 LNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSI 418
                   +LFD+    ++ +WN +IA Y QNG  +EAIS F +M+     PN VT  S+
Sbjct: 233 --------ELFDKMKLGNV-TWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSV 283

Query: 419 LSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSE 478
           L A A L A   G   H  +    F SN  V  +LIDMYAKCG +  + +LF+ M HK  
Sbjct: 284 LPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLDYSEKLFNEMDHKDT 343

Query: 479 VTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQS 538
           V+WN M+SGY +HGHG  A+ LFS M  S ++   V+F+SVL AC HAGLV EG +IF S
Sbjct: 344 VSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHAGLVEEGRKIFHS 403

Query: 539 MIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTN 598
           M   +  KP  EHYACMVD+LGRAG  ++ L FIK + VEP   VWGALLG+C +H +  
Sbjct: 404 MSDKYHIKPDLEHYACMVDLLGRAGLFDETLGFIKVMPVEPDAGVWGALLGSCRMHSNVK 463

Query: 599 LARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVG 658
           L  VA + L +L+P N  + V+LS+IY+    +  A   R  +    L K PGC+ +E+ 
Sbjct: 464 LGEVALDHLVKLEPRNPAHFVVLSSIYAQSGRWADAGKARSKMNDLGLKKTPGCSWVELK 523

Query: 659 GTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSE 718
              H F  GD+ HPQ  +++ +   L  KM + G+  +    L +VEEE+KE+ +  HSE
Sbjct: 524 NKVHAFRVGDKSHPQLESMHLLWNTLLEKMEKIGYVPDRSCVLQNVEEEDKEMFLYSHSE 583

Query: 719 KLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVC 778
           +LAI F L+ T PG+ I+I+KNLRVC DCHT TKFISK+T R I+VRDA RFHHF+ G+C
Sbjct: 584 RLAITFALLNTPPGSTIQIVKNLRVCADCHTTTKFISKITTRRIIVRDATRFHHFEDGIC 643

Query: 779 SCGDYW 784
           SC DYW
Sbjct: 644 SCNDYW 649



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 130/523 (24%), Positives = 212/523 (40%), Gaps = 146/523 (27%)

Query: 12  FLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPD 71
           +  LL   K  + L Q HAQII+ GF++  S +T L +  S F     AR++F S P P 
Sbjct: 55  YPRLLSSCKHLNPLLQIHAQIIVSGFKHHHS-ITHLINLYSLFHKCDLARSVFDSTPNPS 113

Query: 72  LFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLH 131
             L+N +IR ++ ++    ++  Y               Y  V                 
Sbjct: 114 RILWNSMIRAYTRSKQYNEALEMY---------------YCMVEKG-------------- 144

Query: 132 GHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMK----- 186
                 G   D+F+GA LVD+Y K   +K AR+VFDKMP++D V WN+MI+GL +     
Sbjct: 145 ------GLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPY 198

Query: 187 --------------------------NCCFQDSIWVFGDMVRNGGTW------------- 207
                                     N CF + + +F  M     TW             
Sbjct: 199 VARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVTWNVIIAAYMQNGHA 258

Query: 208 ----------------LDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGL 251
                            +S +  +VLPA A +   R GM      +++GF  +  V   L
Sbjct: 259 KEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSL 318

Query: 252 VSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNS 311
           +  Y+KCG+++ +E LF ++   D +S NAM+SGY  +G  + ++ LF  +  S  +++S
Sbjct: 319 IDMYAKCGQLDYSEKLFNEMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDS 378

Query: 312 STIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDE 371
            + V ++                S C  +G+V                   E  RK+F  
Sbjct: 379 VSFVSVL----------------SACRHAGLV-------------------EEGRKIFHS 403

Query: 372 SSEK-----SLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLG 426
            S+K      L  +  M+    + GL +E +   + M    V P+     ++L +C    
Sbjct: 404 MSDKYHIKPDLEHYACMVDLLGRAGLFDETLGFIKVM---PVEPDAGVWGALLGSCRMHS 460

Query: 427 AISLGK-WVHELVK--SRNFESNIYVSTALIDMYAKCGNIVEA 466
            + LG+  +  LVK   RN    + +S+    +YA+ G   +A
Sbjct: 461 NVKLGEVALDHLVKLEPRNPAHFVVLSS----IYAQSGRWADA 499


>gi|124360227|gb|ABN08240.1| Tetratricopeptide-like helical [Medicago truncatula]
          Length = 687

 Score =  452 bits (1163), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 247/675 (36%), Positives = 380/675 (56%), Gaps = 36/675 (5%)

Query: 145 VGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNG 204
           +G  L+ +         AR++FD +P+ D    +++IS L  +    ++I ++  +   G
Sbjct: 14  LGLRLIRVALNVGDFNRARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQERG 73

Query: 205 GTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERA 264
                   +AA          LR+  E+     + G    V+V   L+  Y KC  VE A
Sbjct: 74  IKPDMPVFLAAAKACAVSGDALRVK-EVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGA 132

Query: 265 ELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPF 324
             +F D+V  D++S  ++ S Y   G     + +FR++  S  + N  T+  ++P     
Sbjct: 133 RRVFDDLVVRDVVSWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAEL 192

Query: 325 GHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFD-------------- 370
             L     IH F ++ G+V N  V +AL ++Y++   +  AR +FD              
Sbjct: 193 KDLKSGKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVL 252

Query: 371 ------ESSEKSL---------------ASWNAMIAGYTQNGLTEEAISLFQEMQASKVA 409
                 +  EK                 A+WNA+I G  +NG +EEA+ +F++MQ     
Sbjct: 253 TAYFKNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVEMFRKMQKMGFK 312

Query: 410 PNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEAREL 469
           PN +T+SSIL AC+    + +GK +H  V       ++  +TAL+ MYAKCG++  +R +
Sbjct: 313 PNEITISSILPACSFSENLRMGKEIHCYVFRHWKVGDLTSTTALLYMYAKCGDLNLSRNV 372

Query: 470 FDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLV 529
           FD+M  K  V WNTMI    +HG+G EAL LF +ML S ++P+ VTF  VL  CSH+ LV
Sbjct: 373 FDMMRRKDVVAWNTMIIANAMHGNGKEALFLFDKMLLSRVQPNSVTFTGVLSGCSHSRLV 432

Query: 530 REGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLG 589
            EG +IF SM  DH  +P A HY+C+VDI  RAG+L +A +FI+G+ +EP  + WGALL 
Sbjct: 433 EEGVQIFNSMGRDHLVEPDANHYSCVVDIYSRAGRLNEAYKFIQGMPMEPTASAWGALLA 492

Query: 590 ACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKA 649
           AC ++K+  LA+++++KLFE++P N G +V L NI    + + +A+ VR ++K+R + K 
Sbjct: 493 ACRVYKNVELAKISAKKLFEIEPNNPGNYVSLFNILVTAKMWSEASQVRILMKERGITKT 552

Query: 650 PGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEK 709
           PGC+ ++VG   H F  GD+ + +S  IY  L++L  KM+ AG++ +T   L D+++EEK
Sbjct: 553 PGCSWLQVGNKVHTFVVGDKSNIESDKIYNFLDELVEKMKMAGYKPDTDYVLQDIDQEEK 612

Query: 710 ELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANR 769
              +  HSEKLA+AFG++     + IR+ KNLR+C DCH A K++SKV G +IVVRD+ R
Sbjct: 613 AESLCNHSEKLAVAFGILNLNGQSTIRVFKNLRICGDCHNAIKYMSKVVGVIIVVRDSLR 672

Query: 770 FHHFKGGVCSCGDYW 784
           FHHFK G CSC D W
Sbjct: 673 FHHFKNGNCSCKDLW 687



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 131/485 (27%), Positives = 235/485 (48%), Gaps = 50/485 (10%)

Query: 44  VTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTA 103
           + ++A  + DF     AR LF +IP+PD    + +I   + + +   +I  Y+ L++   
Sbjct: 18  LIRVALNVGDFNR---ARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQER-G 73

Query: 104 LTPDNFTYSFVLSAASACCDRSIGVL---LHGHAIVSGYGSDLFVGAALVDLYFKFSWVK 160
           + PD   +   L+AA AC      +    +H  A   G  SD+FVG AL+  Y K   V+
Sbjct: 74  IKPDMPVF---LAAAKACAVSGDALRVKEVHDDATRCGVMSDVFVGNALIHAYGKCKCVE 130

Query: 161 SARKVFDKMPEKDTVLWNSMISGLMKNCCF-QDSIWVFGDMVRNGGTWLDSTSVAAVLPA 219
            AR+VFD +  +D V W S+ S  +K C F +  + VF +M  + G   +  +V+++LPA
Sbjct: 131 GARRVFDDLVVRDVVSWTSLSSCYVK-CGFPRKGMDVFREMGWS-GVKPNPMTVSSILPA 188

Query: 220 VAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLF----------- 268
            AE+++L+ G EI    ++ G   +++V + LVS Y+KC  V  A ++F           
Sbjct: 189 CAELKDLKSGKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHRDVVSW 248

Query: 269 ------------------------RDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLA 304
                                   RD VR D  + NA+I G   NG++E ++ +FR++  
Sbjct: 249 NGVLTAYFKNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVEMFRKMQK 308

Query: 305 SAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEA 364
              + N  TI  ++P      +L +   IH +  +   V + +  TAL  +Y++  ++  
Sbjct: 309 MGFKPNEITISSILPACSFSENLRMGKEIHCYVFRHWKVGDLTSTTALLYMYAKCGDLNL 368

Query: 365 ARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQ 424
           +R +FD    K + +WN MI     +G  +EA+ LF +M  S+V PN VT + +LS C+ 
Sbjct: 369 SRNVFDMMRRKDVVAWNTMIIANAMHGNGKEALFLFDKMLLSRVQPNSVTFTGVLSGCSH 428

Query: 425 LGAISLGKWV-HELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVT-WN 482
              +  G  + + + +    E +    + ++D+Y++ G + EA +    M  +   + W 
Sbjct: 429 SRLVEEGVQIFNSMGRDHLVEPDANHYSCVVDIYSRAGRLNEAYKFIQGMPMEPTASAWG 488

Query: 483 TMISG 487
            +++ 
Sbjct: 489 ALLAA 493



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 96/410 (23%), Positives = 173/410 (42%), Gaps = 59/410 (14%)

Query: 24  QLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFS 83
           ++ + H      G  +D+     L H     K    AR +F  +   D+  +  +   + 
Sbjct: 96  RVKEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGARRVFDDLVVRDVVSWTSLSSCYV 155

Query: 84  NNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDL 143
               P+  +  +  +   + + P+  T S +L A +   D   G  +HG A+  G   +L
Sbjct: 156 KCGFPRKGMDVFREMGW-SGVKPNPMTVSSILPACAELKDLKSGKEIHGFAVRHGMVVNL 214

Query: 144 FVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRN 203
           FV +ALV LY K   V+ AR VFD MP +D V WN +++   KN  ++    +F  M R+
Sbjct: 215 FVCSALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVLTAYFKNKEYEKGFSLFLKMSRD 274

Query: 204 G-----GTW-----------------------------LDSTSVAAVLPAVAEVQELRLG 229
           G      TW                              +  +++++LPA +  + LR+G
Sbjct: 275 GVRADEATWNAVIGGCMENGRSEEAVEMFRKMQKMGFKPNEITISSILPACSFSENLRMG 334

Query: 230 MEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCN 289
            EI C   +      +   T L+  Y+KCG++  +  +F  + R D+++ N MI     +
Sbjct: 335 KEIHCYVFRHWKVGDLTSTTALLYMYAKCGDLNLSRNVFDMMRRKDVVAWNTMIIANAMH 394

Query: 290 GKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIV------ 343
           G  + +L LF ++L S  + NS T  G+           L+ C HS  ++ G+       
Sbjct: 395 GNGKEALFLFDKMLLSRVQPNSVTFTGV-----------LSGCSHSRLVEEGVQIFNSMG 443

Query: 344 ------SNSSVLTALSTVYSRLNEMEAARKLFDE-SSEKSLASWNAMIAG 386
                  +++  + +  +YSR   +  A K       E + ++W A++A 
Sbjct: 444 RDHLVEPDANHYSCVVDIYSRAGRLNEAYKFIQGMPMEPTASAWGALLAA 493


>gi|224112267|ref|XP_002316137.1| predicted protein [Populus trichocarpa]
 gi|222865177|gb|EEF02308.1| predicted protein [Populus trichocarpa]
          Length = 601

 Score =  452 bits (1163), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 229/578 (39%), Positives = 349/578 (60%), Gaps = 7/578 (1%)

Query: 211 TSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSK---CGEVERAELL 267
           +S+ + LP    ++EL+   +IQ   +K    + + +LT L++  ++      ++ A  L
Sbjct: 27  SSLLSCLPKCTSLKELK---QIQAFSIKTHLQNDLQILTKLINSCTQNPTTASMDYAHQL 83

Query: 268 FRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHL 327
           F  I +PD++  N+M  GY+ +     ++ LF + L      +  T   L+         
Sbjct: 84  FEAIPQPDIVLFNSMFRGYSRSNAPLKAISLFIKALNYNLLPDDYTFPSLLKACVVAKAF 143

Query: 328 HLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGY 387
                +H   +K G+  N  V   L  +Y+  N+++ A+++FDE  E  + S+NA+I GY
Sbjct: 144 QQGKQLHCLAIKLGLNENPYVCPTLINMYAGCNDVDGAQRVFDEILEPCVVSYNAIITGY 203

Query: 388 TQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNI 447
            ++    EA+SLF+++QA K+ PN VTV S+LS+CA LGA+ LGKW+HE VK    +  +
Sbjct: 204 ARSSRPNEALSLFRQLQARKLKPNDVTVLSVLSSCALLGALDLGKWIHEYVKKNGLDKYV 263

Query: 448 YVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHS 507
            V+TALIDMYAKCG++  A  +F+ MS +    W+ MI  Y +HG G + + +F EM  +
Sbjct: 264 KVNTALIDMYAKCGSLDGAISVFESMSVRDTQAWSAMIVAYAMHGQGQDVMSMFEEMARA 323

Query: 508 GIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEK 567
            ++P  +TFL +LYACSH GLV EG   F SM   +G  P  +HY CMVD+LGRAG L +
Sbjct: 324 KVQPDEITFLGLLYACSHTGLVDEGFRYFYSMSEVYGIIPGIKHYGCMVDLLGRAGLLHE 383

Query: 568 ALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSA 627
           A +FI  L ++P P +W  LL +C  H +  LA+    ++ ELD  + G +V+LSN+ + 
Sbjct: 384 AYKFIDELPIKPTPILWRTLLSSCSSHGNLELAKQVMNQILELDDSHGGDYVILSNLCAR 443

Query: 628 ERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGK 687
              +    T+R+++  +   K PGC+ IEV    H F SGD +H  STA++  L++L  +
Sbjct: 444 AGKWEDVDTLRKLMIHKGAVKIPGCSSIEVDNVVHEFFSGDGVHYVSTALHRALDELVKE 503

Query: 688 MREAGFQTETVTALH-DVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLD 746
           ++  G+  +T   +H D+E+EEKE+ ++ HSEKLAI+FGL+ T PGT IR++KNLRVC D
Sbjct: 504 LKSVGYVPDTSLVVHPDMEDEEKEITLRYHSEKLAISFGLLNTPPGTTIRVVKNLRVCGD 563

Query: 747 CHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           CH+A K IS +  R I++RD  RFHHFK G CSCGDYW
Sbjct: 564 CHSAAKLISSLIDREIILRDVQRFHHFKDGKCSCGDYW 601



 Score =  172 bits (436), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 105/387 (27%), Positives = 201/387 (51%), Gaps = 4/387 (1%)

Query: 162 ARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVA 221
           A ++F+ +P+ D VL+NSM  G  ++     +I +F   + N     D  +  ++L A  
Sbjct: 80  AHQLFEAIPQPDIVLFNSMFRGYSRSNAPLKAISLFIKAL-NYNLLPDDYTFPSLLKACV 138

Query: 222 EVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNA 281
             +  + G ++ CL +KLG +++ YV   L++ Y+ C +V+ A+ +F +I+ P ++S NA
Sbjct: 139 VAKAFQQGKQLHCLAIKLGLNENPYVCPTLINMYAGCNDVDGAQRVFDEILEPCVVSYNA 198

Query: 282 MISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSG 341
           +I+GY  + +   +L LFRQL A   + N  T++ ++      G L L   IH +  K+G
Sbjct: 199 IITGYARSSRPNEALSLFRQLQARKLKPNDVTVLSVLSSCALLGALDLGKWIHEYVKKNG 258

Query: 342 IVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQ 401
           +     V TAL  +Y++   ++ A  +F+  S +   +W+AMI  Y  +G  ++ +S+F+
Sbjct: 259 LDKYVKVNTALIDMYAKCGSLDGAISVFESMSVRDTQAWSAMIVAYAMHGQGQDVMSMFE 318

Query: 402 EMQASKVAPNPVTVSSILSACAQLGAISLG-KWVHELVKSRNFESNIYVSTALIDMYAKC 460
           EM  +KV P+ +T   +L AC+  G +  G ++ + + +       I     ++D+  + 
Sbjct: 319 EMARAKVQPDEITFLGLLYACSHTGLVDEGFRYFYSMSEVYGIIPGIKHYGCMVDLLGRA 378

Query: 461 GNIVEARELFDLMSHK-SEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSV 519
           G + EA +  D +  K + + W T++S    HG+   A Q+ +++L       G  ++ +
Sbjct: 379 GLLHEAYKFIDELPIKPTPILWRTLLSSCSSHGNLELAKQVMNQILELDDSHGG-DYVIL 437

Query: 520 LYACSHAGLVREGDEIFQSMIHDHGFK 546
              C+ AG   + D + + MIH    K
Sbjct: 438 SNLCARAGKWEDVDTLRKLMIHKGAVK 464



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 123/472 (26%), Positives = 211/472 (44%), Gaps = 41/472 (8%)

Query: 12  FLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATC---YARALFFSIP 68
            LS L    +  +L Q  A  I    QNDL  +TKL +  +    T    YA  LF +IP
Sbjct: 29  LLSCLPKCTSLKELKQIQAFSIKTHLQNDLQILTKLINSCTQNPTTASMDYAHQLFEAIP 88

Query: 69  KPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGV 128
           +PD+ LFN + RG+S +  P  +I  +     N  L PD++T+  +L A         G 
Sbjct: 89  QPDIVLFNSMFRGYSRSNAPLKAISLFIKAL-NYNLLPDDYTFPSLLKACVVAKAFQQGK 147

Query: 129 LLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNC 188
            LH  AI  G   + +V   L+++Y   + V  A++VFD++ E   V +N++I+G  ++ 
Sbjct: 148 QLHCLAIKLGLNENPYVCPTLINMYAGCNDVDGAQRVFDEILEPCVVSYNAIITGYARSS 207

Query: 189 CFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVL 248
              +++ +F  +        D T V +VL + A +  L LG  I     K G   +V V 
Sbjct: 208 RPNEALSLFRQLQARKLKPNDVT-VLSVLSSCALLGALDLGKWIHEYVKKNGLDKYVKVN 266

Query: 249 TGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAER 308
           T L+  Y+KCG ++ A  +F  +   D  + +AMI  Y  +G+ +  + +F ++  +  +
Sbjct: 267 TALIDMYAKCGSLDGAISVFESMSVRDTQAWSAMIVAYAMHGQGQDVMSMFEEMARAKVQ 326

Query: 309 VNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKL 368
            +  T +GL           L  C H+  +  G         ++S VY  +         
Sbjct: 327 PDEITFLGL-----------LYACSHTGLVDEGF----RYFYSMSEVYGII--------- 362

Query: 369 FDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAI 428
                   +  +  M+    + GL  EA     E+    + P P+   ++LS+C+  G +
Sbjct: 363 ------PGIKHYGCMVDLLGRAGLLHEAYKFIDEL---PIKPTPILWRTLLSSCSSHGNL 413

Query: 429 SLGKWV-HELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEV 479
            L K V +++++  +     YV   L ++ A+ G   +   L  LM HK  V
Sbjct: 414 ELAKQVMNQILELDDSHGGDYV--ILSNLCARAGKWEDVDTLRKLMIHKGAV 463


>gi|225450565|ref|XP_002281942.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48910
           isoform 1 [Vitis vinifera]
          Length = 672

 Score =  452 bits (1162), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 253/685 (36%), Positives = 380/685 (55%), Gaps = 51/685 (7%)

Query: 109 FTYSFVLSAASACCDRSIGVLLHGHAIV--SGYGSDLFVGAALVDLYFKFSW-----VKS 161
            ++  +L   +  C  S+  L   HA++  +G+  D ++  +LV  Y   S       +S
Sbjct: 30  LSHKAILHLLNTQCTTSLHHLKQAHALILRTGHLQDSYIAGSLVKSYANVSTNRYLSFES 89

Query: 162 ARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVA 221
           + +VFD + + +  LWN MI   ++N     +I ++ +M+       +  +  AVL A +
Sbjct: 90  SLRVFDFVRKPNVFLWNCMIKVCIENNEPFKAILLYYEMMV-AHFRPNKYTYPAVLKACS 148

Query: 222 EVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIV-RPDLISCN 280
           +   +  G+++    +K G     ++L+  +  Y+  G +  A  +  D     D +  N
Sbjct: 149 DAGVVAEGVQVHAHLVKHGLGGDGHILSSAIRMYASFGRLVEARRILDDKGGEVDAVCWN 208

Query: 281 AMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKS 340
           AMI GY   G+ E++  LF  +       + S I                          
Sbjct: 209 AMIDGYLRFGEVEAARELFEGM------PDRSMI-------------------------- 236

Query: 341 GIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLF 400
                 S   A+ + +SR   +E AR+ FDE  E+   SW+AMI GY Q G   EA+ +F
Sbjct: 237 ------STWNAMISGFSRCGMVEVAREFFDEMKERDEISWSAMIDGYIQEGCFMEALEIF 290

Query: 401 QEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKC 460
            +MQ  K+ P    + S+LSACA LGA+  G+W+H   K  + + +  + T+L+DMYAKC
Sbjct: 291 HQMQKEKIRPRKFVLPSVLSACANLGALDQGRWIHTYAKRNSIQLDGVLGTSLVDMYAKC 350

Query: 461 GNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVL 520
           G I  A E+F+ MS+K   +WN MI G  +HG   +A+ LFS+M    I P+ +TF+ VL
Sbjct: 351 GRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFSKM---DINPNEITFVGVL 407

Query: 521 YACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPG 580
            AC+H GLV++G  IF SM  ++G +P  EHY C+VD+LGRAG L +A + +  +  EP 
Sbjct: 408 NACAHGGLVQKGLTIFNSMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAEKVVSSIPTEPT 467

Query: 581 PAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQV 640
           PAVWGALLGAC  H +  L     + L EL+P+N G + LLSNIY+    + +   VR++
Sbjct: 468 PAVWGALLGACRKHGNVELGERVGKILLELEPQNSGRYTLLSNIYAKAGRWEEVGEVRKL 527

Query: 641 VKKRKLAKAPGCTLIEVG-GTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVT 699
           +K+R +   PG ++I++G G  H F  GD  HPQ   IY ML+K+  +++  G++ +   
Sbjct: 528 MKERGIKTTPGTSIIDLGRGEVHKFIIGDGSHPQVKDIYQMLDKVKERLQMEGYEPDPSQ 587

Query: 700 ALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTG 759
            L D++EEEKE  +  HSEKLAI FGLI T PGT IRI+KNLRVC DCH+ATK IS+V  
Sbjct: 588 VLFDIDEEEKETAVWQHSEKLAIGFGLINTSPGTTIRIVKNLRVCEDCHSATKLISQVYN 647

Query: 760 RVIVVRDANRFHHFKGGVCSCGDYW 784
           R I+VRD  R+HHF+ G CSC D+W
Sbjct: 648 REIIVRDRIRYHHFRNGACSCKDFW 672



 Score = 60.1 bits (144), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 81/342 (23%), Positives = 131/342 (38%), Gaps = 69/342 (20%)

Query: 27  QTHAQIIIHGFQND---LSTVTKL---------AHRLSDFK-----ATCY---------- 59
           Q HA ++ HG   D   LS+  ++         A R+ D K     A C+          
Sbjct: 158 QVHAHLVKHGLGGDGHILSSAIRMYASFGRLVEARRILDDKGGEVDAVCWNAMIDGYLRF 217

Query: 60  -----ARALFFSIPKPDLF-LFNVIIRGFSN-----------------NEMPKSSI---- 92
                AR LF  +P   +   +N +I GFS                  +E+  S++    
Sbjct: 218 GEVEAARELFEGMPDRSMISTWNAMISGFSRCGMVEVAREFFDEMKERDEISWSAMIDGY 277

Query: 93  ----CFYT-----HLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDL 143
               CF       H  +   + P  F    VLSA +       G  +H +A  +    D 
Sbjct: 278 IQEGCFMEALEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQGRWIHTYAKRNSIQLDG 337

Query: 144 FVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRN 203
            +G +LVD+Y K   +  A +VF+KM  K+   WN+MI GL  +   +D+I +F  M  N
Sbjct: 338 VLGTSLVDMYAKCGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFSKMDIN 397

Query: 204 GGTWLDSTSVAAVLPAVAEVQELRLGMEI-QCLGLKLGFHDHVYVLTGLVSFYSKCGEVE 262
                +  +   VL A A    ++ G+ I   +  + G    +     +V    + G + 
Sbjct: 398 P----NEITFVGVLNACAHGGLVQKGLTIFNSMRKEYGVEPQIEHYGCIVDLLGRAGLLT 453

Query: 263 RAELLFRDI-VRPDLISCNAMISGYTCNGKTESSLRLFRQLL 303
            AE +   I   P      A++     +G  E   R+ + LL
Sbjct: 454 EAEKVVSSIPTEPTPAVWGALLGACRKHGNVELGERVGKILL 495


>gi|224131508|ref|XP_002328557.1| predicted protein [Populus trichocarpa]
 gi|222838272|gb|EEE76637.1| predicted protein [Populus trichocarpa]
          Length = 643

 Score =  452 bits (1162), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 252/680 (37%), Positives = 380/680 (55%), Gaps = 45/680 (6%)

Query: 110 TYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKS---ARKVF 166
           T    LS  + C   +    +H + +  G  SD F+   L+  +   S   S   A ++F
Sbjct: 4   TEPLCLSLLNICKSLTTFKQIHANVLKLGLESDPFIAGKLLH-HCAISLSDSLDYACRLF 62

Query: 167 DKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQEL 226
              P  D  + N++I GL ++   QDS+  F +M RN  +  DS S A ++ A A ++ +
Sbjct: 63  RYTPNPDVFMHNTLIRGLYESDRPQDSLLKFIEMRRNSFSPPDSFSFAFIVKAAANLRSV 122

Query: 227 RLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGY 286
           R+G+++ C  L  G   H++V T L+S Y +CG V  A  +F ++  P+ I+ NAM++  
Sbjct: 123 RVGIQLHCQALVHGLDTHLFVGTTLISMYGECGFVGFARKVFDEMPEPNAIAWNAMVTAC 182

Query: 287 TCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNS 346
              G  +    LF                 L+PV                     ++S +
Sbjct: 183 CRGGDMKGGRELF----------------DLMPV-------------------RNLMSWN 207

Query: 347 SVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQAS 406
            +L      Y++  E+E AR++F E   K   SW+ MI G+  NG  EEA S F+E+Q  
Sbjct: 208 VMLAG----YTKAGELELAREMFLEMPMKDDVSWSTMIVGFAHNGYFEEAFSFFRELQRK 263

Query: 407 KVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEA 466
            + PN  +++ +LSACAQ GA+  GK +H  ++       + V+ AL+D Y+KCGN++ A
Sbjct: 264 GMRPNETSLTGVLSACAQAGALEFGKILHGFIEKSGLAWIVSVNNALLDTYSKCGNVLMA 323

Query: 467 RELFD-LMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSH 525
           + +F+ +M+ ++ V+W +M++   +HGHG EA+ +F +M  SGIRP  + F+S+LYACSH
Sbjct: 324 QLVFERIMNERNIVSWTSMMAALAMHGHGEEAIGIFHKMEESGIRPDEIAFISLLYACSH 383

Query: 526 AGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWG 585
           AGLV +G E F  M   +  +P  EHY CMVD+ GRAGQL+KA EF+  + +     +W 
Sbjct: 384 AGLVEQGCEYFDKMKGMYNIEPSIEHYGCMVDLYGRAGQLQKAYEFVCQMPIPCTAIIWR 443

Query: 586 ALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRK 645
            LLGAC +H D  LA    E+L ELDP N   HVLLSN Y+    +  AA+VR+ + +++
Sbjct: 444 TLLGACSMHGDVKLAEQVKERLSELDPNNSSDHVLLSNAYAVAGKWKDAASVRRSMTEQR 503

Query: 646 LAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMR-EAGFQTETVTALHDV 704
           + K PG ++IEV    + F +G + +  +   Y  L+++  ++R E G+  E    LHD+
Sbjct: 504 ITKTPGWSMIEVDKIMYTFLAGTKQYKITEEAYKKLKEIIRRLRVEGGYVPEIGRVLHDI 563

Query: 705 EEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVV 764
           EEEEKE  + VHSEKLA+AFG+     G  IRI+KNLR+C DCH   K IS++    IVV
Sbjct: 564 EEEEKEGSVSVHSEKLAVAFGIARLCKGRTIRIVKNLRICRDCHAVMKLISQIYKVEIVV 623

Query: 765 RDANRFHHFKGGVCSCGDYW 784
           RD +RFH FK G CSC DYW
Sbjct: 624 RDRSRFHSFKDGYCSCRDYW 643



 Score =  220 bits (560), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 141/493 (28%), Positives = 242/493 (49%), Gaps = 49/493 (9%)

Query: 7   QSRNLFLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHR----LSDFKATCYARA 62
           ++  L LSLL   K+ +   Q HA ++  G ++D     KL H     LSD  +  YA  
Sbjct: 3   KTEPLCLSLLNICKSLTTFKQIHANVLKLGLESDPFIAGKLLHHCAISLSD--SLDYACR 60

Query: 63  LFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACC 122
           LF   P PD+F+ N +IRG   ++ P+ S+  +  +R+N+   PD+F+++F++ AA+   
Sbjct: 61  LFRYTPNPDVFMHNTLIRGLYESDRPQDSLLKFIEMRRNSFSPPDSFSFAFIVKAAANLR 120

Query: 123 DRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMIS 182
              +G+ LH  A+V G  + LFVG  L+ +Y +  +V  ARKVFD+MPE + + WN+M++
Sbjct: 121 SVRVGIQLHCQALVHGLDTHLFVGTTLISMYGECGFVGFARKVFDEMPEPNAIAWNAMVT 180

Query: 183 GLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFH 242
                CC        GDM + G    D   V  ++                         
Sbjct: 181 A----CCRG------GDM-KGGRELFDLMPVRNLMS------------------------ 205

Query: 243 DHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQL 302
                   +++ Y+K GE+E A  +F ++   D +S + MI G+  NG  E +   FR+L
Sbjct: 206 -----WNVMLAGYTKAGELELAREMFLEMPMKDDVSWSTMIVGFAHNGYFEEAFSFFREL 260

Query: 303 LASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEM 362
                R N +++ G++      G L     +H F  KSG+    SV  AL   YS+   +
Sbjct: 261 QRKGMRPNETSLTGVLSACAQAGALEFGKILHGFIEKSGLAWIVSVNNALLDTYSKCGNV 320

Query: 363 EAARKLFDE-SSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSA 421
             A+ +F+   +E+++ SW +M+A    +G  EEAI +F +M+ S + P+ +   S+L A
Sbjct: 321 LMAQLVFERIMNERNIVSWTSMMAALAMHGHGEEAIGIFHKMEESGIRPDEIAFISLLYA 380

Query: 422 CAQLGAISLG-KWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHK-SEV 479
           C+  G +  G ++  ++    N E +I     ++D+Y + G + +A E    M    + +
Sbjct: 381 CSHAGLVEQGCEYFDKMKGMYNIEPSIEHYGCMVDLYGRAGQLQKAYEFVCQMPIPCTAI 440

Query: 480 TWNTMISGYGLHG 492
            W T++    +HG
Sbjct: 441 IWRTLLGACSMHG 453


>gi|413944893|gb|AFW77542.1| putative pentatricopeptide repeat family protein [Zea mays]
          Length = 829

 Score =  452 bits (1162), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 257/761 (33%), Positives = 427/761 (56%), Gaps = 24/761 (3%)

Query: 37  FQNDLSTVTKLAHRLSDFKATCYARALFFSIPK--PDLFLFNVIIRGFSNNEMPKSSICF 94
            + D      L    S   A   AR++F  +P    DL  +  +    S N     ++  
Sbjct: 80  LETDAVVANSLLTLYSKCSAVAAARSVFDGMPVGLRDLVSWTAMASCLSRNGAEAEALRL 139

Query: 95  YTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVS------GYGSDLFVGAA 148
           +    +   L P+ FT    L AA+  C  S    L G A++        +G+D+ VG A
Sbjct: 140 FGETLEE-GLLPNAFT----LCAATQACFASELFHLAGGAVLGLVFKLGFWGTDVSVGCA 194

Query: 149 LVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWL 208
           L+D++ K   + + R+VFD + E+  V+W  +I+   ++    +++ +F DM+ NG    
Sbjct: 195 LIDMFAKNGDLVAMRRVFDGLFERTVVVWTLLITRYAQSGYSDEAVELFLDMLENG-FQP 253

Query: 209 DSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKC---GEVERAE 265
           D  +++++L A  E+   RLG ++  L L+LG      V  GLV  Y+K      +  A 
Sbjct: 254 DQYTLSSMLSACTELGSFRLGQQLHSLALRLGLESDSCVSCGLVDMYAKSHNGQSLHNAR 313

Query: 266 LLFRDIVRPDLISCNAMISGYTCNGKTESSLR-LFRQLLASAERVNSSTIVGLIPVFYPF 324
            +F  + + ++++  A++SGY   G  ++ +  LF ++L    R N  T   ++      
Sbjct: 314 EVFNRMPKHNVMAWTALLSGYVQRGSQDNQVMILFCKMLNEGIRPNHITYSSMLKACANL 373

Query: 325 GHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMI 384
           G       IH+ C+KS +   + V  AL ++Y+    +E AR  FD+  EK++ S++  +
Sbjct: 374 GDQDSGRQIHTHCVKSNLADLNVVGNALVSMYAESGSIEEARHAFDQLYEKNMVSFSGNL 433

Query: 385 AGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFE 444
            G  ++   ++      +++  ++  +  T  S++SA A +G ++ G+ +H L     F 
Sbjct: 434 DGDGRSNTYQD-----YQIERMELGISTFTFGSLISAAASVGMLTKGQRLHALSLKAGFG 488

Query: 445 SNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEM 504
           S+  +  +L+ MY++CG +V+A ++FD M+  + ++W +MISG   HG+   AL+LF +M
Sbjct: 489 SDRAIGNSLVSMYSRCGYLVDACQVFDEMNDHNVISWTSMISGLAKHGYAARALELFHDM 548

Query: 505 LHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQ 564
           + +G++P+ VT+++VL ACSHAGLV+EG E F+ M   HG  P  EHYACMVD+LGR+G 
Sbjct: 549 IAAGVKPNDVTYIAVLSACSHAGLVKEGKEHFRMMQKHHGLIPRMEHYACMVDLLGRSGL 608

Query: 565 LEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNI 624
           +E AL+FI  +  +    VW  LLGAC  H + ++  +A+  + +L+P++   +VLLSN+
Sbjct: 609 VEDALDFINEMPCQVDALVWKTLLGACKTHNNMDIGEIAANHVIQLEPQDPAPYVLLSNL 668

Query: 625 YSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKL 684
           Y+    + Q A +R +++ + L K  G + + V  T H F +GD  HPQ+  IY  LE L
Sbjct: 669 YAEAGLWDQVARIRSLMRDKNLMKEKGLSWMHVDNTIHEFRAGDTSHPQAEEIYTKLETL 728

Query: 685 NGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTE-IRIIKNLRV 743
             +++  G+  +T   LHD+ +E KEL +  HSEK+A+AFGLI+    T+ IRI KNLRV
Sbjct: 729 IREIKVMGYVPDTSVVLHDMSDELKELCLLQHSEKIAVAFGLISCTSATKPIRIFKNLRV 788

Query: 744 CLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           C+DCH+A K++SK TGR I++RD+NRFH  K G CSCG+YW
Sbjct: 789 CVDCHSALKYVSKATGREIILRDSNRFHRMKDGECSCGEYW 829



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 46/166 (27%), Positives = 72/166 (43%), Gaps = 6/166 (3%)

Query: 428 ISLGKWV--HELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLM--SHKSEVTWNT 483
           I LG+ +  H L      E++  V+ +L+ +Y+KC  +  AR +FD M    +  V+W  
Sbjct: 63  IHLGRALQGHLLRTGSLLETDAVVANSLLTLYSKCSAVAAARSVFDGMPVGLRDLVSWTA 122

Query: 484 MISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDH 543
           M S    +G   EAL+LF E L  G+ P+  T  +   AC  + L          ++   
Sbjct: 123 MASCLSRNGAEAEALRLFGETLEEGLLPNAFTLCAATQACFASELFHLAGGAVLGLVFKL 182

Query: 544 GFKPLAEHYAC-MVDILGRAGQLEKALEFIKGLAVEPGPAVWGALL 588
           GF        C ++D+  + G L        GL  E    VW  L+
Sbjct: 183 GFWGTDVSVGCALIDMFAKNGDLVAMRRVFDGL-FERTVVVWTLLI 227


>gi|15232837|ref|NP_186850.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75193830|sp|Q9S7F4.1|PP206_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At2g01510
 gi|6091739|gb|AAF03451.1|AC010797_27 hypothetical protein [Arabidopsis thaliana]
 gi|6513930|gb|AAF14834.1|AC011664_16 hypothetical protein [Arabidopsis thaliana]
 gi|332640228|gb|AEE73749.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 825

 Score =  452 bits (1162), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 241/730 (33%), Positives = 412/730 (56%), Gaps = 7/730 (0%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALT-PDNFTYSFVLSAA 118
           AR LF ++P   +  + +++  ++ N     +   +  + ++++ T PD+ T++ +L   
Sbjct: 98  ARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGC 157

Query: 119 SACCDRSIGVLLHGHAIVSGYGSDLF--VGAALVDLYFKFSWVKSARKVFDKMPEKDTVL 176
           +    ++    +H  A+  G+ ++ F  V   L+  Y +   +  A  +F+++PEKD+V 
Sbjct: 158 NDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVT 217

Query: 177 WNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLG 236
           +N++I+G  K+  + +SI +F  M ++G    D T  + VL AV  + +  LG ++  L 
Sbjct: 218 FNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFT-FSGVLKAVVGLHDFALGQQLHALS 276

Query: 237 LKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSL 296
           +  GF     V   ++ FYSK   V    +LF ++   D +S N +IS Y+   + E+SL
Sbjct: 277 VTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASL 336

Query: 297 RLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVY 356
             FR++        +     ++ +      L +   +H   L +   S   V  +L  +Y
Sbjct: 337 HFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMY 396

Query: 357 SRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVS 416
           ++    E A  +F    +++  SW A+I+GY Q GL    + LF +M+ S +  +  T +
Sbjct: 397 AKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFA 456

Query: 417 SILSACAQLGAISLGKWVHE-LVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSH 475
           ++L A A   ++ LGK +H  +++S N E N++  + L+DMYAKCG+I +A ++F+ M  
Sbjct: 457 TVLKASASFASLLLGKQLHAFIIRSGNLE-NVFSGSGLVDMYAKCGSIKDAVQVFEEMPD 515

Query: 476 KSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEI 535
           ++ V+WN +IS +  +G G  A+  F++M+ SG++P  V+ L VL ACSH G V +G E 
Sbjct: 516 RNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEY 575

Query: 536 FQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHK 595
           FQ+M   +G  P  +HYACM+D+LGR G+  +A + +  +  EP   +W ++L AC IHK
Sbjct: 576 FQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHK 635

Query: 596 DTNLARVASEKLFELDP-ENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTL 654
           + +LA  A+EKLF ++   +   +V +SNIY+A  ++ +   V++ +++R + K P  + 
Sbjct: 636 NQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIKKVPAYSW 695

Query: 655 IEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMK 714
           +EV    HVF+S DQ HP    I   + +L  ++   G++ +T + + DV+E+ K   +K
Sbjct: 696 VEVNHKIHVFSSNDQTHPNGDEIVRKINELTAEIEREGYKPDTSSVVQDVDEQMKIESLK 755

Query: 715 VHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFK 774
            HSE+LA+AF LI+T  G  I ++KNLR C DCH A K ISK+  R I VRD +RFHHF 
Sbjct: 756 YHSERLAVAFALISTPEGCPIVVMKNLRACRDCHAAIKLISKIVKREITVRDTSRFHHFS 815

Query: 775 GGVCSCGDYW 784
            GVCSCGDYW
Sbjct: 816 EGVCSCGDYW 825



 Score =  178 bits (452), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 140/532 (26%), Positives = 242/532 (45%), Gaps = 68/532 (12%)

Query: 135 IVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMK-------- 186
           I +G+ +D      +V+   +   V +ARKV+D+MP K+TV  N+MISG +K        
Sbjct: 40  IKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKTGDVSSAR 99

Query: 187 -----------------------NCCFQDSIWVFGDMVRNGG-TWLDSTSVAAVLPAVAE 222
                                  N  F ++  +F  M R+   T  D  +   +LP   +
Sbjct: 100 DLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCND 159

Query: 223 VQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAEL---LFRDIVRPDLISC 279
                   ++    +KLGF  + ++    V   S C EV R +L   LF +I   D ++ 
Sbjct: 160 AVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYC-EVRRLDLACVLFEEIPEKDSVTF 218

Query: 280 NAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLK 339
           N +I+GY  +G    S+ LF ++  S  + +  T  G++          L   +H+  + 
Sbjct: 219 NTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVT 278

Query: 340 SGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISL 399
           +G   ++SV   +   YS+ + +   R LFDE  E    S+N +I+ Y+Q    E ++  
Sbjct: 279 TGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHF 338

Query: 400 FQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAK 459
           F+EMQ           +++LS  A L ++ +G+ +H        +S ++V  +L+DMYAK
Sbjct: 339 FREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAK 398

Query: 460 CGNIVEARELFDLMSHKSEVTWNTMISGY---GLHGHGLEALQLFSEMLHSGIRPSGVTF 516
           C    EA  +F  +  ++ V+W  +ISGY   GLHG G   L+LF++M  S +R    TF
Sbjct: 399 CEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAG---LKLFTKMRGSNLRADQSTF 455

Query: 517 LSVLYACS-----------HAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQL 565
            +VL A +           HA ++R G+   +++    G          +VD+  + G +
Sbjct: 456 ATVLKASASFASLLLGKQLHAFIIRSGN--LENVFSGSG----------LVDMYAKCGSI 503

Query: 566 EKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFE--LDPENV 615
           + A++  + +  +     W AL+ A   + D   A  A  K+ E  L P++V
Sbjct: 504 KDAVQVFEEMP-DRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSV 554



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 114/450 (25%), Positives = 206/450 (45%), Gaps = 35/450 (7%)

Query: 27  QTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNE 86
           Q HA  +  GF  D S   ++    S        R LF  +P+ D   +NV+I  +S  +
Sbjct: 271 QLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQAD 330

Query: 87  MPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVG 146
             ++S+ F+  + +       NF ++ +LS A+      +G  LH  A+++   S L VG
Sbjct: 331 QYEASLHFFREM-QCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVG 389

Query: 147 AALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGT 206
            +LVD+Y K    + A  +F  +P++ TV W ++ISG ++       + +F  M R    
Sbjct: 390 NSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKM-RGSNL 448

Query: 207 WLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAEL 266
             D ++ A VL A A    L LG ++    ++ G  ++V+  +GLV  Y+KCG ++ A  
Sbjct: 449 RADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQ 508

Query: 267 LFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGH 326
           +F ++   + +S NA+IS +  NG  E+++  F +++ S  + +S +I+G+         
Sbjct: 509 VFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGV--------- 559

Query: 327 LHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAG 386
             LT C H   ++ G    +    A+S +Y     +   +K            +  M+  
Sbjct: 560 --LTACSHCGFVEQG----TEYFQAMSPIYG----ITPKKK-----------HYACMLDL 598

Query: 387 YTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESN 446
             +NG   EA  L  EM      P+ +  SS+L+AC      SL +   E + S     +
Sbjct: 599 LGRNGRFAEAEKLMDEM---PFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRD 655

Query: 447 IYVSTALIDMYAKCGNIVEARELFDLMSHK 476
                ++ ++YA  G   + R++   M  +
Sbjct: 656 AAAYVSMSNIYAAAGEWEKVRDVKKAMRER 685



 Score = 79.0 bits (193), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 69/258 (26%), Positives = 113/258 (43%), Gaps = 36/258 (13%)

Query: 301 QLLASAERVNSSTIVGLIPVFYPFGHLHL-TNCIHSFCLKSGIVSNSSVLTALSTVYSRL 359
           +L  ++  V S T+  L  +  P     L T  + +  +K+G  +++     +     R 
Sbjct: 2   KLYCNSNEVRSRTLATLRQLRQPSPATFLDTRRVDARIIKTGFDTDTCRSNFIVEDLLRR 61

Query: 360 NEMEAARKLFDESSEKSLASWNAMIAG-------------------------------YT 388
            ++ AARK++DE   K+  S N MI+G                               Y 
Sbjct: 62  GQVSAARKVYDEMPHKNTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYA 121

Query: 389 QNGLTEEAISLFQEM--QASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESN 446
           +N   +EA  LF++M   +S   P+ VT +++L  C      +    VH       F++N
Sbjct: 122 RNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTN 181

Query: 447 IY--VSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEM 504
            +  VS  L+  Y +   +  A  LF+ +  K  VT+NT+I+GY   G   E++ LF +M
Sbjct: 182 PFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKM 241

Query: 505 LHSGIRPSGVTFLSVLYA 522
             SG +PS  TF  VL A
Sbjct: 242 RQSGHQPSDFTFSGVLKA 259


>gi|356553444|ref|XP_003545066.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g09950-like [Glycine max]
          Length = 1033

 Score =  451 bits (1161), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 271/769 (35%), Positives = 419/769 (54%), Gaps = 13/769 (1%)

Query: 25   LTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSN 84
            L Q  A+I    F  DL   + L    + +     A+ +F  +   +    N ++ G + 
Sbjct: 269  LEQMLARIEKSSFVKDLYVGSALVSGFARYGLIDSAKMIFEQMDDRNAVTMNGLMVGLAR 328

Query: 85   NEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCD----RSIGVLLHGHAIVSGYG 140
                + +   +  ++    +     +Y+ +LSA +   +    +  G  +H + I +   
Sbjct: 329  QHQGEEAAKIFKEMKDLVEINAS--SYAVLLSAFTEFSNLKEGKRKGQEVHAYLIRNALV 386

Query: 141  SD-LFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGD 199
               + +G ALV+LY K + + +AR +F  MP KDTV WNS+ISGL  N  F++++  F  
Sbjct: 387  DVWILIGNALVNLYAKCNAIDNARSIFQLMPSKDTVSWNSIISGLDHNERFEEAVACFHT 446

Query: 200  MVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCG 259
            M RNG       SV + L + A +  + LG +I   G+K G    V V   L++ Y++  
Sbjct: 447  MRRNGMV-PSKFSVISTLSSCASLGWIMLGQQIHGEGIKCGLDLDVSVSNALLTLYAETD 505

Query: 260  EVERAELLFRDIVRPDLISCNAMISGY-TCNGKTESSLRLFRQLLASAERVNSSTIVGLI 318
             +E  + +F  +   D +S N+ I    T       +++ F +++ +  + N  T + ++
Sbjct: 506  CMEEYQKVFFLMPEYDQVSWNSFIGALATSEASVLQAIKYFLEMMQAGWKPNRVTFINIL 565

Query: 319  PVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEK-SL 377
                    L L   IH+  LK  +  ++++   L   Y +  +ME    +F   SE+   
Sbjct: 566  SAVSSLSLLELGRQIHALILKHSVADDNAIENTLLAFYGKCEQMEDCEIIFSRMSERRDE 625

Query: 378  ASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHEL 437
             SWNAMI+GY  NG+  +A+ L   M       +  T++++LSACA +  +  G  VH  
Sbjct: 626  VSWNAMISGYIHNGILHKAMGLVWLMMQKGQRLDDFTLATVLSACASVATLERGMEVHAC 685

Query: 438  VKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEA 497
                  E+ + V +AL+DMYAKCG I  A   F+LM  ++  +WN+MISGY  HGHG +A
Sbjct: 686  AIRACLEAEVVVGSALVDMYAKCGKIDYASRFFELMPVRNIYSWNSMISGYARHGHGGKA 745

Query: 498  LQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVD 557
            L+LF++M   G  P  VTF+ VL ACSH GLV EG E F+SM   +   P  EH++CMVD
Sbjct: 746  LKLFTQMKQHGQLPDHVTFVGVLSACSHVGLVDEGFEHFKSMGEVYELAPRIEHFSCMVD 805

Query: 558  ILGRAGQLEKALEFIKGLAVEPGPAVWGALLGAC--MIHKDTNLARVASEKLFELDPENV 615
            +LGRAG ++K  EFIK + + P   +W  +LGAC     ++T L R A++ L EL+P N 
Sbjct: 806  LLGRAGDVKKLEEFIKTMPMNPNALIWRTILGACCRANSRNTELGRRAAKMLIELEPLNA 865

Query: 616  GYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQST 675
              +VLLSN+++A   +      R  ++  ++ K  GC+ + +    HVF +GDQ HP+  
Sbjct: 866  VNYVLLSNMHAAGGKWEDVEEARLAMRNAEVKKEAGCSWVTMKDGVHVFVAGDQTHPEKE 925

Query: 676  AIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEI 735
             IY  L+++  KMR+ G+  ET  AL+D+E E KE ++  HSEKLAIAF ++  +    I
Sbjct: 926  KIYDKLKEIMNKMRDLGYVPETKYALYDLELENKEELLSYHSEKLAIAF-VLTRQSELPI 984

Query: 736  RIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
            RIIKNLRVC DCHTA K+IS +  R I++RD+NRFHHF GG+CSC DYW
Sbjct: 985  RIIKNLRVCGDCHTAFKYISNIVNRQIILRDSNRFHHFDGGICSCQDYW 1033



 Score =  176 bits (445), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 149/623 (23%), Positives = 294/623 (47%), Gaps = 27/623 (4%)

Query: 10  NLFLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPK 69
           NL  +  + + T     Q H QI   G  +D+     L +          A+ LF  +P+
Sbjct: 43  NLDYNRYRDSCTVEDAHQLHLQIYKTGLTSDVFWCNTLVNIFVRAGNLVSAQKLFDEMPQ 102

Query: 70  PDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDR----- 124
            +L  ++ ++ G++ N MP  +   +  +  +  L P+++    + SA  AC +      
Sbjct: 103 KNLVSWSCLVSGYAQNGMPDEACMLFRGI-ISAGLLPNHYA---IGSALRACQELGPNML 158

Query: 125 SIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSW-VKSARKVFDKMPEKDTVLWNSMISG 183
            +G+ +HG    S Y SD+ +   L+ +Y   S  +  AR+VF+++  K +  WNS+IS 
Sbjct: 159 KLGMEIHGLISKSPYASDMVLSNVLMSMYSHCSASIDDARRVFEEIKMKTSASWNSIISV 218

Query: 184 LMKNCCFQDSIWVFGDMVRNG---GTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGL--K 238
             +      +  +F  M R         +  +  +++     + +  L +  Q L    K
Sbjct: 219 YCRRGDAISAFKLFSSMQREATELNCRPNEYTFCSLVTVACSLVDCGLTLLEQMLARIEK 278

Query: 239 LGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRL 298
             F   +YV + LVS +++ G ++ A+++F  +   + ++ N ++ G     + E + ++
Sbjct: 279 SSFVKDLYVGSALVSGFARYGLIDSAKMIFEQMDDRNAVTMNGLMVGLARQHQGEEAAKI 338

Query: 299 FRQLLASAERVNSSTIVGLIPVFYPFGHL----HLTNCIHSFCLKSGIVSNSSVL-TALS 353
           F+++    E +N+S+   L+  F  F +L         +H++ +++ +V    ++  AL 
Sbjct: 339 FKEMKDLVE-INASSYAVLLSAFTEFSNLKEGKRKGQEVHAYLIRNALVDVWILIGNALV 397

Query: 354 TVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPV 413
            +Y++ N ++ AR +F     K   SWN++I+G   N   EEA++ F  M+ + + P+  
Sbjct: 398 NLYAKCNAIDNARSIFQLMPSKDTVSWNSIISGLDHNERFEEAVACFHTMRRNGMVPSKF 457

Query: 414 TVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLM 473
           +V S LS+CA LG I LG+ +H        + ++ VS AL+ +YA+   + E +++F LM
Sbjct: 458 SVISTLSSCASLGWIMLGQQIHGEGIKCGLDLDVSVSNALLTLYAETDCMEEYQKVFFLM 517

Query: 474 SHKSEVTWNTMISGYGL-HGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREG 532
               +V+WN+ I          L+A++ F EM+ +G +P+ VTF+++L A S   L+  G
Sbjct: 518 PEYDQVSWNSFIGALATSEASVLQAIKYFLEMMQAGWKPNRVTFINILSAVSSLSLLELG 577

Query: 533 DEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGAC- 591
            +I  ++I  H           ++   G+  Q+E        ++       W A++    
Sbjct: 578 RQI-HALILKHSVADDNAIENTLLAFYGKCEQMEDCEIIFSRMSERRDEVSWNAMISGYI 636

Query: 592 ---MIHKDTNLARVASEKLFELD 611
              ++HK   L  +  +K   LD
Sbjct: 637 HNGILHKAMGLVWLMMQKGQRLD 659



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 88/301 (29%), Positives = 149/301 (49%), Gaps = 14/301 (4%)

Query: 333 IHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGL 392
           +H    K+G+ S+      L  ++ R   + +A+KLFDE  +K+L SW+ +++GY QNG+
Sbjct: 61  LHLQIYKTGLTSDVFWCNTLVNIFVRAGNLVSAQKLFDEMPQKNLVSWSCLVSGYAQNGM 120

Query: 393 TEEAISLFQEMQASKVAPNPVTVSSILSACAQLGA--ISLGKWVHELVKSRNFESNIYVS 450
            +EA  LF+ + ++ + PN   + S L AC +LG   + LG  +H L+    + S++ +S
Sbjct: 121 PDEACMLFRGIISAGLLPNHYAIGSALRACQELGPNMLKLGMEIHGLISKSPYASDMVLS 180

Query: 451 TALIDMYAKC-GNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGI 509
             L+ MY+ C  +I +AR +F+ +  K+  +WN++IS Y   G  + A +LFS M     
Sbjct: 181 NVLMSMYSHCSASIDDARRVFEEIKMKTSASWNSIISVYCRRGDAISAFKLFSSMQREAT 240

Query: 510 ----RPSGVTFLS-VLYACSHAGLVREGDEIFQSM---IHDHGFKPLAEHYACMVDILGR 561
               RP+  TF S V  ACS   LV  G  + + M   I    F       + +V    R
Sbjct: 241 ELNCRPNEYTFCSLVTVACS---LVDCGLTLLEQMLARIEKSSFVKDLYVGSALVSGFAR 297

Query: 562 AGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLL 621
            G ++ A    + +       + G ++G    H+    A++  E    ++     Y VLL
Sbjct: 298 YGLIDSAKMIFEQMDDRNAVTMNGLMVGLARQHQGEEAAKIFKEMKDLVEINASSYAVLL 357

Query: 622 S 622
           S
Sbjct: 358 S 358


>gi|15234095|ref|NP_195043.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75206840|sp|Q9SMZ2.1|PP347_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g33170
 gi|4455331|emb|CAB36791.1| putative protein [Arabidopsis thaliana]
 gi|7270265|emb|CAB80034.1| putative protein [Arabidopsis thaliana]
 gi|332660786|gb|AEE86186.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 990

 Score =  451 bits (1161), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 254/682 (37%), Positives = 391/682 (57%), Gaps = 9/682 (1%)

Query: 107 DNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVF 166
           D  T+  +L+ A      ++G  +H  A+  G    L V  +L+++Y K      AR VF
Sbjct: 314 DQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVF 373

Query: 167 DKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQE- 225
           D M E+D + WNS+I+G+ +N    +++ +F  ++R  G   D  ++ +VL A + + E 
Sbjct: 374 DNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLR-CGLKPDQYTMTSVLKAASSLPEG 432

Query: 226 LRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISG 285
           L L  ++    +K+      +V T L+  YS+   ++ AE+LF +    DL++ NAM++G
Sbjct: 433 LSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILF-ERHNFDLVAWNAMMAG 491

Query: 286 YTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNC---IHSFCLKSGI 342
           YT +     +L+LF  +    ER +  T   L  VF   G L   N    +H++ +KSG 
Sbjct: 492 YTQSHDGHKTLKLFALMHKQGERSDDFT---LATVFKTCGFLFAINQGKQVHAYAIKSGY 548

Query: 343 VSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQE 402
             +  V + +  +Y +  +M AA+  FD        +W  MI+G  +NG  E A  +F +
Sbjct: 549 DLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQ 608

Query: 403 MQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGN 462
           M+   V P+  T++++  A + L A+  G+ +H      N  ++ +V T+L+DMYAKCG+
Sbjct: 609 MRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGS 668

Query: 463 IVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYA 522
           I +A  LF  +   +   WN M+ G   HG G E LQLF +M   GI+P  VTF+ VL A
Sbjct: 669 IDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSA 728

Query: 523 CSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPA 582
           CSH+GLV E  +  +SM  D+G KP  EHY+C+ D LGRAG +++A   I+ +++E   +
Sbjct: 729 CSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASAS 788

Query: 583 VWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVK 642
           ++  LL AC +  DT   +  + KL EL+P +   +VLLSN+Y+A   + +    R ++K
Sbjct: 789 MYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMK 848

Query: 643 KRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALH 702
             K+ K PG + IEV    H+F   D+ + Q+  IY  ++ +   +++ G+  ET   L 
Sbjct: 849 GHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQTELIYRKVKDMIRDIKQEGYVPETDFTLV 908

Query: 703 DVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVI 762
           DVEEEEKE  +  HSEKLA+AFGL++T P T IR+IKNLRVC DCH A K+I+KV  R I
Sbjct: 909 DVEEEEKERALYYHSEKLAVAFGLLSTPPSTPIRVIKNLRVCGDCHNAMKYIAKVYNREI 968

Query: 763 VVRDANRFHHFKGGVCSCGDYW 784
           V+RDANRFH FK G+CSCGDYW
Sbjct: 969 VLRDANRFHRFKDGICSCGDYW 990



 Score =  197 bits (502), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 186/701 (26%), Positives = 299/701 (42%), Gaps = 105/701 (14%)

Query: 12  FLSLLKGAKTQSQLTQ---THAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIP 68
           +   L+ A T S L     THA+I+      +   +  L    S   +  YAR +F  +P
Sbjct: 42  WFGFLRNAITSSDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMP 101

Query: 69  KPDLFLFNVIIRGFSNN-----EMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCD 123
             DL  +N I+  ++ +     E  + +   +  LR++       +T    LS     C 
Sbjct: 102 DRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVV-----YTSRMTLSPMLKLCL 156

Query: 124 RSIGVL----LHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNS 179
            S  V      HG+A   G   D FV  ALV++Y KF  VK  + +F++MP +D VLWN 
Sbjct: 157 HSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNL 216

Query: 180 MISGLMKNCCFQDSI----------------------WVFGD------------------ 199
           M+   ++    +++I                       + GD                  
Sbjct: 217 MLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITLRLLARISGDDSDAGQVKSFANGNDASS 276

Query: 200 ----MVRNGG--TWLDSTSVAAVLPAVAEVQE----------------------LRLGME 231
               + RN G   +L S   +A+L   A++ E                      L LG +
Sbjct: 277 VSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQ 336

Query: 232 IQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGK 291
           + C+ LKLG    + V   L++ Y K  +   A  +F ++   DLIS N++I+G   NG 
Sbjct: 337 VHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGL 396

Query: 292 TESSLRLFRQLLASAERVNSSTIVGLIPVF--YPFGHLHLTNCIHSFCLKSGIVSNSSVL 349
              ++ LF QLL    + +  T+  ++      P G L L+  +H   +K   VS+S V 
Sbjct: 397 EVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEG-LSLSKQVHVHAIKINNVSDSFVS 455

Query: 350 TALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVA 409
           TAL   YSR   M+ A  LF E     L +WNAM+AGYTQ+    + + LF  M      
Sbjct: 456 TALIDAYSRNRCMKEAEILF-ERHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGER 514

Query: 410 PNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEAREL 469
            +  T++++   C  L AI+ GK VH       ++ +++VS+ ++DMY KCG++  A+  
Sbjct: 515 SDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFA 574

Query: 470 FDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLV 529
           FD +    +V W TMISG   +G    A  +FS+M   G+ P   T  ++  A S    +
Sbjct: 575 FDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTAL 634

Query: 530 REGDEIFQSMIHDHGFK------PLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAV 583
            +G +     IH +  K      P       +VD+  + G ++ A    K + +    A 
Sbjct: 635 EQGRQ-----IHANALKLNCTNDPFVG--TSLVDMYAKCGSIDDAYCLFKRIEMMNITA- 686

Query: 584 WGALLGACMIHKD--TNLARVASEKLFELDPENVGYHVLLS 622
           W A+L     H +    L      K   + P+ V +  +LS
Sbjct: 687 WNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLS 727



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 128/502 (25%), Positives = 238/502 (47%), Gaps = 7/502 (1%)

Query: 27  QTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNE 86
           Q H   +  G    L+    L +     +   +AR +F ++ + DL  +N +I G + N 
Sbjct: 336 QVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNG 395

Query: 87  MPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCD-RSIGVLLHGHAIVSGYGSDLFV 145
           +   ++C +  L +   L PD +T + VL AAS+  +  S+   +H HAI     SD FV
Sbjct: 396 LEVEAVCLFMQLLR-CGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFV 454

Query: 146 GAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGG 205
             AL+D Y +   +K A  +F++    D V WN+M++G  ++     ++ +F  M + G 
Sbjct: 455 STALIDAYSRNRCMKEAEILFER-HNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGE 513

Query: 206 TWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAE 265
              D  ++A V      +  +  G ++    +K G+   ++V +G++  Y KCG++  A+
Sbjct: 514 R-SDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQ 572

Query: 266 LLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFG 325
             F  I  PD ++   MISG   NG+ E +  +F Q+       +  TI  L        
Sbjct: 573 FAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLT 632

Query: 326 HLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIA 385
            L     IH+  LK    ++  V T+L  +Y++   ++ A  LF      ++ +WNAM+ 
Sbjct: 633 ALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLV 692

Query: 386 GYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLG-KWVHELVKSRNFE 444
           G  Q+G  +E + LF++M++  + P+ VT   +LSAC+  G +S   K +  +      +
Sbjct: 693 GLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIK 752

Query: 445 SNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVT-WNTMISGYGLHGHGLEALQLFSE 503
             I   + L D   + G + +A  L + MS ++  + + T+++   + G      ++ ++
Sbjct: 753 PEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKRVATK 812

Query: 504 MLH-SGIRPSGVTFLSVLYACS 524
           +L    +  S    LS +YA +
Sbjct: 813 LLELEPLDSSAYVLLSNMYAAA 834



 Score = 68.9 bits (167), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 77/306 (25%), Positives = 135/306 (44%), Gaps = 15/306 (4%)

Query: 23  SQLTQTHAQIIIHGFQNDL---STVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVII 79
           +Q  Q HA  I  G+  DL   S +  +  +  D  A  +A   F SIP PD   +  +I
Sbjct: 534 NQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFA---FDSIPVPDDVAWTTMI 590

Query: 80  RGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGY 139
            G   N   + +   ++ +R    L PD FT + +  A+S       G  +H +A+    
Sbjct: 591 SGCIENGEEERAFHVFSQMRLMGVL-PDEFTIATLAKASSCLTALEQGRQIHANALKLNC 649

Query: 140 GSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGD 199
            +D FVG +LVD+Y K   +  A  +F ++   +   WN+M+ GL ++   ++++ +F  
Sbjct: 650 TNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQ 709

Query: 200 MVRNGGTWLDSTSVAAVLPAVAE---VQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYS 256
           M ++ G   D  +   VL A +    V E    M  + +    G    +   + L     
Sbjct: 710 M-KSLGIKPDKVTFIGVLSACSHSGLVSEAYKHM--RSMHGDYGIKPEIEHYSCLADALG 766

Query: 257 KCGEVERAELLFRDIVRPDLISC-NAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIV 315
           + G V++AE L   +      S    +++     G TE+  R+  +LL   E ++SS  V
Sbjct: 767 RAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKRVATKLL-ELEPLDSSAYV 825

Query: 316 GLIPVF 321
            L  ++
Sbjct: 826 LLSNMY 831


>gi|357497455|ref|XP_003619016.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494031|gb|AES75234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 999

 Score =  451 bits (1161), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 259/778 (33%), Positives = 410/778 (52%), Gaps = 34/778 (4%)

Query: 11  LFLSLLKGAKTQSQL----TQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFS 66
           LF  ++  A T+ +      Q H  ++  GF ++      L    S       A  +F  
Sbjct: 252 LFCQIVLSACTKVEFFEFGKQLHGLVLKQGFSSETYVCNALVTLYSRSGNLSSAEQIFHC 311

Query: 67  IPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSI 126
           + + D   +N +I G +       ++  +  +  +    PD  T + +LSA ++      
Sbjct: 312 MSQRDRVSYNSLISGLAQQGYINRALALFKKMNLDCQ-KPDCVTVASLLSACASVGALPN 370

Query: 127 GVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMK 186
           G   H +AI +G  SD+ V  +L+DLY K S +K+A + F             +  G + 
Sbjct: 371 GKQFHSYAIKAGMTSDIVVEGSLLDLYVKCSDIKTAHEFF-------------LCYGQLD 417

Query: 187 NCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVY 246
           N     S  +F  M +  G   +  +  ++L     +    LG +I    LK GF  +VY
Sbjct: 418 N--LNKSFQIFTQM-QIEGIVPNQFTYPSILKTCTTLGATDLGEQIHTQVLKTGFQFNVY 474

Query: 247 VLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASA 306
           V + L+  Y+K G+++ A  +FR +   D++S  AMI+GYT + K   +L LF+++    
Sbjct: 475 VSSVLIDMYAKHGKLDHALKIFRRLKENDVVSWTAMIAGYTQHDKFTEALNLFKEMQDQG 534

Query: 307 ERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAAR 366
            + ++      I        L     IH+    SG   + S+  AL ++Y+R  ++  A 
Sbjct: 535 IKSDNIGFASAISACAGIQALDQGRQIHAQSCLSGYSDDLSIGNALVSLYARCGKVREAY 594

Query: 367 KLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLG 426
             FD+   K   SWN++++G+ Q+G  EEA+++F +M  + +  N  T  S +SA A + 
Sbjct: 595 AAFDQIYAKDNVSWNSLVSGFAQSGYFEEALNIFAQMNKAGLEINSFTFGSAVSAAANIA 654

Query: 427 AISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMIS 486
            + +GK +H +++   ++S   VS ALI +YAKCG I              +++WN+MI+
Sbjct: 655 NVRIGKQIHGMIRKTGYDSETEVSNALITLYAKCGTI-------------DDISWNSMIT 701

Query: 487 GYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFK 546
           GY  HG G EAL+LF +M    + P+ VTF+ VL ACSH GLV EG   F+SM   H   
Sbjct: 702 GYSQHGCGFEALKLFEDMKQLDVLPNHVTFVGVLSACSHVGLVDEGISYFRSMSEAHNLV 761

Query: 547 PLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEK 606
           P  EHYAC+VD+LGR+G L +A  F++ + ++P   VW  LL AC +HK+ ++   A+  
Sbjct: 762 PKPEHYACVVDLLGRSGLLSRAKRFVEEMPIQPDAMVWRTLLSACNVHKNIDIGEFAASH 821

Query: 607 LFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTS 666
           L EL+P++   +VL+SN+Y+    +      RQ++K R + K PG + +EV  + H F +
Sbjct: 822 LLELEPKDSATYVLVSNMYAVSGKWDCRDRTRQMMKDRGVKKEPGRSWVEVDNSVHAFFA 881

Query: 667 GDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGL 726
           GDQ HP++  IY  L  L+ +  E G+     + L D E  +K+    +HSE+LAIAFGL
Sbjct: 882 GDQNHPRADMIYEYLRGLDFRAAENGYVPRCNSLLSDAEIRQKDPTEIIHSERLAIAFGL 941

Query: 727 IATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           ++    T + + KNLRVC DCH   K +SK+T RVI+VRD+ RFHHFK G CSC DYW
Sbjct: 942 LSLTSSTPLYVFKNLRVCEDCHNWIKHVSKITDRVIIVRDSYRFHHFKVGSCSCKDYW 999



 Score =  215 bits (547), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 134/440 (30%), Positives = 218/440 (49%), Gaps = 33/440 (7%)

Query: 130 LHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCC 189
           +H   I SG+ S  F+   L+DLYFK  ++ SA+KVF+ +  +D+V W +MISGL +N  
Sbjct: 186 IHAKTITSGFESSTFICNPLIDLYFKNGFLSSAKKVFENLKARDSVSWVAMISGLSQNGY 245

Query: 190 FQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLT 249
            ++++ +F  +               VL A  +V+    G ++  L LK GF    YV  
Sbjct: 246 EEEAMLLFCQI---------------VLSACTKVEFFEFGKQLHGLVLKQGFSSETYVCN 290

Query: 250 GLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERV 309
            LV+ YS+ G +  AE +F  + + D +S N++ISG    G    +L LF+++    ++ 
Sbjct: 291 ALVTLYSRSGNLSSAEQIFHCMSQRDRVSYNSLISGLAQQGYINRALALFKKMNLDCQKP 350

Query: 310 NSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLF 369
           +  T+  L+      G L      HS+ +K+G+ S+  V  +L  +Y + ++++ A + F
Sbjct: 351 DCVTVASLLSACASVGALPNGKQFHSYAIKAGMTSDIVVEGSLLDLYVKCSDIKTAHEFF 410

Query: 370 DESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAIS 429
                            Y Q     ++  +F +MQ   + PN  T  SIL  C  LGA  
Sbjct: 411 ---------------LCYGQLDNLNKSFQIFTQMQIEGIVPNQFTYPSILKTCTTLGATD 455

Query: 430 LGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYG 489
           LG+ +H  V    F+ N+YVS+ LIDMYAK G +  A ++F  +     V+W  MI+GY 
Sbjct: 456 LGEQIHTQVLKTGFQFNVYVSSVLIDMYAKHGKLDHALKIFRRLKENDVVSWTAMIAGYT 515

Query: 490 LHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIF-QSMIHDHGFKPL 548
            H    EAL LF EM   GI+   + F S + AC+    + +G +I  QS +   G+   
Sbjct: 516 QHDKFTEALNLFKEMQDQGIKSDNIGFASAISACAGIQALDQGRQIHAQSCL--SGYSDD 573

Query: 549 AEHYACMVDILGRAGQLEKA 568
                 +V +  R G++ +A
Sbjct: 574 LSIGNALVSLYARCGKVREA 593



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 128/453 (28%), Positives = 209/453 (46%), Gaps = 33/453 (7%)

Query: 143 LFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVR 202
            + G  L+D Y  F  +  A  VFD+MP +    WN + +  +          +F  M+ 
Sbjct: 97  FYDGLKLIDFYLAFGDLNCAVNVFDEMPIRSLSCWNRIFNTFIAERLMGRVPGLFRRMLT 156

Query: 203 NGGTWLDSTSVAAVLPAVA-EVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEV 261
                 D    A VL   +      R   +I    +  GF    ++   L+  Y K G +
Sbjct: 157 K-NVEFDERIFAVVLRGCSGNAVSFRFVEQIHAKTITSGFESSTFICNPLIDLYFKNGFL 215

Query: 262 ERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVF 321
             A+ +F ++   D +S  AMISG + NG  E ++ LF Q++ SA      T V     F
Sbjct: 216 SSAKKVFENLKARDSVSWVAMISGLSQNGYEEEAMLLFCQIVLSA-----CTKVE----F 266

Query: 322 YPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWN 381
           + FG       +H   LK G  S + V  AL T+YSR   + +A ++F   S++   S+N
Sbjct: 267 FEFGKQ-----LHGLVLKQGFSSETYVCNALVTLYSRSGNLSSAEQIFHCMSQRDRVSYN 321

Query: 382 AMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSR 441
           ++I+G  Q G    A++LF++M      P+ VTV+S+LSACA +GA+  GK  H      
Sbjct: 322 SLISGLAQQGYINRALALFKKMNLDCQKPDCVTVASLLSACASVGALPNGKQFHSYAIKA 381

Query: 442 NFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLF 501
              S+I V  +L+D+Y KC +I  A E F                 YG   +  ++ Q+F
Sbjct: 382 GMTSDIVVEGSLLDLYVKCSDIKTAHEFFLC---------------YGQLDNLNKSFQIF 426

Query: 502 SEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGR 561
           ++M   GI P+  T+ S+L  C+  G    G++I  + +   GF+      + ++D+  +
Sbjct: 427 TQMQIEGIVPNQFTYPSILKTCTTLGATDLGEQI-HTQVLKTGFQFNVYVSSVLIDMYAK 485

Query: 562 AGQLEKALEFIKGLAVEPGPAVWGALLGACMIH 594
            G+L+ AL+  + L  E     W A++     H
Sbjct: 486 HGKLDHALKIFRRLK-ENDVVSWTAMIAGYTQH 517


>gi|356561853|ref|XP_003549191.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g20230-like [Glycine max]
          Length = 748

 Score =  451 bits (1160), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 228/579 (39%), Positives = 343/579 (59%), Gaps = 39/579 (6%)

Query: 245 VYVLTGLVSFYSKCGEVERAELLFRDI----VRPDLISCNAMISGYTCNGKTESSLRLFR 300
           V V + +++ YS+ G VE A+ LF ++    V P+L+S N M++G+  NG  + ++ +FR
Sbjct: 170 VVVWSAMIAGYSRLGLVEEAKELFGEMRSGGVEPNLVSWNGMLAGFGNNGFYDEAVGMFR 229

Query: 301 QLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLN 360
            +L      + ST+  ++P       + +   +H + +K G+ S+  V++A+  +Y +  
Sbjct: 230 MMLVQGFWPDGSTVSCVLPAVGCLEDVVVGAQVHGYVIKQGLGSDKFVVSAMLDMYGKCG 289

Query: 361 EMEAARKLFDESSEKSLASWNAMIAGYTQNGLTE-------------------------- 394
            ++   ++FDE  E  + S NA + G ++NG+ +                          
Sbjct: 290 CVKEMSRVFDEVEEMEIGSLNAFLTGLSRNGMVDTALEVFNKFKDQKMELNVVTWTSIIA 349

Query: 395 ---------EAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFES 445
                    EA+ LF++MQA  V PN VT+ S++ AC  + A+  GK +H     R    
Sbjct: 350 SCSQNGKDLEALELFRDMQAYGVEPNAVTIPSLIPACGNISALMHGKEIHCFSLRRGIFD 409

Query: 446 NIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEML 505
           ++YV +ALIDMYAKCG I  AR  FD MS  + V+WN ++ GY +HG   E +++F  ML
Sbjct: 410 DVYVGSALIDMYAKCGRIQLARRCFDKMSALNLVSWNAVMKGYAMHGKAKETMEMFHMML 469

Query: 506 HSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQL 565
            SG +P  VTF  VL AC+  GL  EG   + SM  +HG +P  EHYAC+V +L R G+L
Sbjct: 470 QSGQKPDLVTFTCVLSACAQNGLTEEGWRCYNSMSEEHGIEPKMEHYACLVTLLSRVGKL 529

Query: 566 EKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIY 625
           E+A   IK +  EP   VWGALL +C +H + +L  +A+EKLF L+P N G ++LLSNIY
Sbjct: 530 EEAYSIIKEMPFEPDACVWGALLSSCRVHNNLSLGEIAAEKLFFLEPTNPGNYILLSNIY 589

Query: 626 SAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLN 685
           +++  + +   +R+V+K + L K PG + IEVG   H+  +GDQ HPQ   I   L+KLN
Sbjct: 590 ASKGLWDEENRIREVMKSKGLRKNPGYSWIEVGHKVHMLLAGDQSHPQMKDILEKLDKLN 649

Query: 686 GKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCL 745
            +M+++G+  +T   L DVEE++KE ++  HSEKLA+  GL+ T PG  +++IKNLR+C 
Sbjct: 650 MQMKKSGYLPKTNFVLQDVEEQDKEQILCGHSEKLAVVLGLLNTSPGQPLQVIKNLRICD 709

Query: 746 DCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           DCH   K IS++ GR I VRD NRFHHFK GVCSCGD+W
Sbjct: 710 DCHAVIKVISRLEGREIYVRDTNRFHHFKDGVCSCGDFW 748



 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 156/601 (25%), Positives = 264/601 (43%), Gaps = 96/601 (15%)

Query: 23  SQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPK-----------PD 71
           SQ  Q HA I+    + +L + T+L   L  F    YA AL  S P+           P 
Sbjct: 17  SQARQAHALIL----RLNLFSDTQLTTSLLSF----YANALSLSTPQLSLTLSSHLPHPT 68

Query: 72  LFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLH 131
           LF F+ +I  F+ +      +  ++HL     L PD F     + + ++      G  LH
Sbjct: 69  LFSFSSLIHAFARSHHFPHVLTTFSHLHP-LRLIPDAFLLPSAIKSCASLRALDPGQQLH 127

Query: 132 GHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQ 191
             A  SG+ +D  V ++L  +Y K   +  ARK+FD+MP++D V+W++MI+G  +    +
Sbjct: 128 AFAAASGFLTDSIVASSLTHMYLKCDRILDARKLFDRMPDRDVVVWSAMIAGYSRLGLVE 187

Query: 192 DSIWVFGDMVRNG----------------------------------GTWLDSTSVAAVL 217
           ++  +FG+M   G                                  G W D ++V+ VL
Sbjct: 188 EAKELFGEMRSGGVEPNLVSWNGMLAGFGNNGFYDEAVGMFRMMLVQGFWPDGSTVSCVL 247

Query: 218 PAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLI 277
           PAV  ++++ +G ++    +K G     +V++ ++  Y KCG V+    +F ++   ++ 
Sbjct: 248 PAVGCLEDVVVGAQVHGYVIKQGLGSDKFVVSAMLDMYGKCGCVKEMSRVFDEVEEMEIG 307

Query: 278 SCNAMISGY---------------------------------TC--NGKTESSLRLFRQL 302
           S NA ++G                                  +C  NGK   +L LFR +
Sbjct: 308 SLNAFLTGLSRNGMVDTALEVFNKFKDQKMELNVVTWTSIIASCSQNGKDLEALELFRDM 367

Query: 303 LASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEM 362
            A     N+ TI  LIP       L     IH F L+ GI  +  V +AL  +Y++   +
Sbjct: 368 QAYGVEPNAVTIPSLIPACGNISALMHGKEIHCFSLRRGIFDDVYVGSALIDMYAKCGRI 427

Query: 363 EAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSAC 422
           + AR+ FD+ S  +L SWNA++ GY  +G  +E + +F  M  S   P+ VT + +LSAC
Sbjct: 428 QLARRCFDKMSALNLVSWNAVMKGYAMHGKAKETMEMFHMMLQSGQKPDLVTFTCVLSAC 487

Query: 423 AQLGAISLG-KWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEV-T 480
           AQ G    G +  + + +    E  +     L+ + ++ G + EA  +   M  + +   
Sbjct: 488 AQNGLTEEGWRCYNSMSEEHGIEPKMEHYACLVTLLSRVGKLEEAYSIIKEMPFEPDACV 547

Query: 481 WNTMISGYGLHGHGLEALQLFSEMLH--SGIRPSGVTFLSVLYACSHAGLVREGDEIFQS 538
           W  ++S   +H + L   ++ +E L       P     LS +YA    GL  E + I + 
Sbjct: 548 WGALLSSCRVH-NNLSLGEIAAEKLFFLEPTNPGNYILLSNIYASK--GLWDEENRIREV 604

Query: 539 M 539
           M
Sbjct: 605 M 605



 Score =  135 bits (340), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 108/443 (24%), Positives = 192/443 (43%), Gaps = 76/443 (17%)

Query: 69  KPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGV 128
           +P+L  +N ++ GF NN     ++  +  +       PD  T S VL A     D  +G 
Sbjct: 202 EPNLVSWNGMLAGFGNNGFYDEAVGMFRMMLVQ-GFWPDGSTVSCVLPAVGCLEDVVVGA 260

Query: 129 LLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNC 188
            +HG+ I  G GSD FV +A++D+Y K   VK   +VFD++ E +    N+ ++GL +N 
Sbjct: 261 QVHGYVIKQGLGSDKFVVSAMLDMYGKCGCVKEMSRVFDEVEEMEIGSLNAFLTGLSRNG 320

Query: 189 CFQDSIWVFGD-----MVRNGGTWL-----------------------------DSTSVA 214
               ++ VF       M  N  TW                              ++ ++ 
Sbjct: 321 MVDTALEVFNKFKDQKMELNVVTWTSIIASCSQNGKDLEALELFRDMQAYGVEPNAVTIP 380

Query: 215 AVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRP 274
           +++PA   +  L  G EI C  L+ G  D VYV + L+  Y+KCG ++ A   F  +   
Sbjct: 381 SLIPACGNISALMHGKEIHCFSLRRGIFDDVYVGSALIDMYAKCGRIQLARRCFDKMSAL 440

Query: 275 DLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIH 334
           +L+S NA++ GY  +GK + ++ +F  +L S ++ +  T                  C+ 
Sbjct: 441 NLVSWNAVMKGYAMHGKAKETMEMFHMMLQSGQKPDLVTFT----------------CVL 484

Query: 335 SFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTE 394
           S C ++G+             Y+ ++E        +   E  +  +  ++   ++ G  E
Sbjct: 485 SACAQNGLTEEG------WRCYNSMSE--------EHGIEPKMEHYACLVTLLSRVGKLE 530

Query: 395 EAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHE---LVKSRN-----FESN 446
           EA S+ +EM      P+     ++LS+C     +SLG+   E    ++  N       SN
Sbjct: 531 EAYSIIKEM---PFEPDACVWGALLSSCRVHNNLSLGEIAAEKLFFLEPTNPGNYILLSN 587

Query: 447 IYVSTALIDMYAKCGNIVEAREL 469
           IY S  L D   +   +++++ L
Sbjct: 588 IYASKGLWDEENRIREVMKSKGL 610



 Score = 99.8 bits (247), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 60/230 (26%), Positives = 118/230 (51%), Gaps = 4/230 (1%)

Query: 334 HSFCLKSGIVSNSSVLTALSTVYSR---LNEMEAARKLFDESSEKSLASWNAMIAGYTQN 390
           H+  L+  + S++ + T+L + Y+    L+  + +  L       +L S++++I  + ++
Sbjct: 23  HALILRLNLFSDTQLTTSLLSFYANALSLSTPQLSLTLSSHLPHPTLFSFSSLIHAFARS 82

Query: 391 GLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVS 450
                 ++ F  +   ++ P+   + S + +CA L A+  G+ +H    +  F ++  V+
Sbjct: 83  HHFPHVLTTFSHLHPLRLIPDAFLLPSAIKSCASLRALDPGQQLHAFAAASGFLTDSIVA 142

Query: 451 TALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIR 510
           ++L  MY KC  I++AR+LFD M  +  V W+ MI+GY   G   EA +LF EM   G+ 
Sbjct: 143 SSLTHMYLKCDRILDARKLFDRMPDRDVVVWSAMIAGYSRLGLVEEAKELFGEMRSGGVE 202

Query: 511 PSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILG 560
           P+ V++  +L    + G   E   +F+ M+   GF P     +C++  +G
Sbjct: 203 PNLVSWNGMLAGFGNNGFYDEAVGMFRMML-VQGFWPDGSTVSCVLPAVG 251


>gi|356555170|ref|XP_003545909.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g20230-like [Glycine max]
          Length = 741

 Score =  451 bits (1160), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 240/662 (36%), Positives = 372/662 (56%), Gaps = 40/662 (6%)

Query: 160 KSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDST--SVAAVL 217
           + A+++FD +P+ D    +++IS         ++I ++  +   G    +S   +VA   
Sbjct: 83  RRAQQLFDNIPQPDPTTCSTLISAFTTRGLPNEAIRLYASLRARGIKPHNSVFLTVAKAC 142

Query: 218 PAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLI 277
            A  +   ++   E+    ++ G     ++   L+  Y KC  VE A  +F D+V  D++
Sbjct: 143 GASGDASRVK---EVHDDAIRCGMMSDAFLGNALIHAYGKCKCVEGARRVFDDLVVKDVV 199

Query: 278 SCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFC 337
           S  +M S Y   G     L +F ++  +  + NS T+  ++P       L     IH F 
Sbjct: 200 SWTSMSSCYVNCGLPRLGLAVFCEMGWNGVKPNSVTLSSILPACSELKDLKSGRAIHGFA 259

Query: 338 LKSGIVSNSSVLTALSTVYSRLNEMEAARKLFD--------------------------- 370
           ++ G++ N  V +AL ++Y+R   ++ AR +FD                           
Sbjct: 260 VRHGMIENVFVCSALVSLYARCLSVKQARLVFDLMPHRDVVSWNGVLTAYFTNREYDKGL 319

Query: 371 --------ESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSAC 422
                   +  E   A+WNA+I G  +NG TE+A+ + ++MQ     PN +T+SS L AC
Sbjct: 320 ALFSQMSSKGVEADEATWNAVIGGCMENGQTEKAVEMLRKMQNLGFKPNQITISSFLPAC 379

Query: 423 AQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWN 482
           + L ++ +GK VH  V       ++   TAL+ MYAKCG++  +R +FD++  K  V WN
Sbjct: 380 SILESLRMGKEVHCYVFRHWLIGDLTTMTALVYMYAKCGDLNLSRNVFDMICRKDVVAWN 439

Query: 483 TMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHD 542
           TMI    +HG+G E L LF  ML SGI+P+ VTF  VL  CSH+ LV EG +IF SM  D
Sbjct: 440 TMIIANAMHGNGREVLLLFESMLQSGIKPNSVTFTGVLSGCSHSRLVEEGLQIFNSMGRD 499

Query: 543 HGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARV 602
           H  +P A HYACMVD+  RAG+L +A EFI+ + +EP  + WGALLGAC ++K+  LA++
Sbjct: 500 HLVEPDANHYACMVDVFSRAGRLHEAYEFIQRMPMEPTASAWGALLGACRVYKNVELAKI 559

Query: 603 ASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPH 662
           ++ KLFE++P N G +V L NI    + + +A+  R ++K+R + K PGC+ ++VG   H
Sbjct: 560 SANKLFEIEPNNPGNYVSLFNILVTAKLWSEASEARILMKERGITKTPGCSWLQVGDRVH 619

Query: 663 VFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAI 722
            F  GD+ + +S  IY  L++L  KM+ AG++ +T   L D+++EEK   +  HSEKLA+
Sbjct: 620 TFVVGDKNNMESDKIYNFLDELGEKMKSAGYKPDTDYVLQDIDQEEKAESLCSHSEKLAV 679

Query: 723 AFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGD 782
           AFG++     + IR+ KNLR+C DCH A K++SKV G  I+VRD+ RFHHF+ G CSC D
Sbjct: 680 AFGILNLNGQSSIRVFKNLRICGDCHNAIKYVSKVVGVTIIVRDSLRFHHFRNGNCSCQD 739

Query: 783 YW 784
            W
Sbjct: 740 LW 741



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 128/477 (26%), Positives = 225/477 (47%), Gaps = 42/477 (8%)

Query: 46  KLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALT 105
           K A  + DF+    A+ LF +IP+PD    + +I  F+   +P  +I  Y  LR    + 
Sbjct: 74  KAALNVGDFR---RAQQLFDNIPQPDPTTCSTLISAFTTRGLPNEAIRLYASLRAR-GIK 129

Query: 106 PDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKV 165
           P N  +  V  A  A  D S    +H  AI  G  SD F+G AL+  Y K   V+ AR+V
Sbjct: 130 PHNSVFLTVAKACGASGDASRVKEVHDDAIRCGMMSDAFLGNALIHAYGKCKCVEGARRV 189

Query: 166 FDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQE 225
           FD +  KD V W SM S  +     +  + VF +M  NG    +S +++++LPA +E+++
Sbjct: 190 FDDLVVKDVVSWTSMSSCYVNCGLPRLGLAVFCEMGWNG-VKPNSVTLSSILPACSELKD 248

Query: 226 LRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLF-----RDIV-------- 272
           L+ G  I    ++ G  ++V+V + LVS Y++C  V++A L+F     RD+V        
Sbjct: 249 LKSGRAIHGFAVRHGMIENVFVCSALVSLYARCLSVKQARLVFDLMPHRDVVSWNGVLTA 308

Query: 273 ----------------------RPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVN 310
                                   D  + NA+I G   NG+TE ++ + R++     + N
Sbjct: 309 YFTNREYDKGLALFSQMSSKGVEADEATWNAVIGGCMENGQTEKAVEMLRKMQNLGFKPN 368

Query: 311 SSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFD 370
             TI   +P       L +   +H +  +  ++ + + +TAL  +Y++  ++  +R +FD
Sbjct: 369 QITISSFLPACSILESLRMGKEVHCYVFRHWLIGDLTTMTALVYMYAKCGDLNLSRNVFD 428

Query: 371 ESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISL 430
               K + +WN MI     +G   E + LF+ M  S + PN VT + +LS C+    +  
Sbjct: 429 MICRKDVVAWNTMIIANAMHGNGREVLLLFESMLQSGIKPNSVTFTGVLSGCSHSRLVEE 488

Query: 431 GKWV-HELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVT-WNTMI 485
           G  + + + +    E +      ++D++++ G + EA E    M  +   + W  ++
Sbjct: 489 GLQIFNSMGRDHLVEPDANHYACMVDVFSRAGRLHEAYEFIQRMPMEPTASAWGALL 545



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 88/289 (30%), Positives = 156/289 (53%), Gaps = 1/289 (0%)

Query: 259 GEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLI 318
           G+  RA+ LF +I +PD  +C+ +IS +T  G    ++RL+  L A   + ++S  + + 
Sbjct: 80  GDFRRAQQLFDNIPQPDPTTCSTLISAFTTRGLPNEAIRLYASLRARGIKPHNSVFLTVA 139

Query: 319 PVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLA 378
                 G       +H   ++ G++S++ +  AL   Y +   +E AR++FD+   K + 
Sbjct: 140 KACGASGDASRVKEVHDDAIRCGMMSDAFLGNALIHAYGKCKCVEGARRVFDDLVVKDVV 199

Query: 379 SWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELV 438
           SW +M + Y   GL    +++F EM  + V PN VT+SSIL AC++L  +  G+ +H   
Sbjct: 200 SWTSMSSCYVNCGLPRLGLAVFCEMGWNGVKPNSVTLSSILPACSELKDLKSGRAIHGFA 259

Query: 439 KSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEAL 498
                  N++V +AL+ +YA+C ++ +AR +FDLM H+  V+WN +++ Y  +    + L
Sbjct: 260 VRHGMIENVFVCSALVSLYARCLSVKQARLVFDLMPHRDVVSWNGVLTAYFTNREYDKGL 319

Query: 499 QLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKP 547
            LFS+M   G+     T+ +V+  C   G   +  E+ + M  + GFKP
Sbjct: 320 ALFSQMSSKGVEADEATWNAVIGGCMENGQTEKAVEMLRKM-QNLGFKP 367



 Score = 95.9 bits (237), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 77/293 (26%), Positives = 126/293 (43%), Gaps = 40/293 (13%)

Query: 359 LNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSI 418
           + +   A++LFD   +    + + +I+ +T  GL  EAI L+  ++A  + P+     ++
Sbjct: 79  VGDFRRAQQLFDNIPQPDPTTCSTLISAFTTRGLPNEAIRLYASLRARGIKPHNSVFLTV 138

Query: 419 LSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSE 478
             AC   G  S  K VH+        S+ ++  ALI  Y KC  +  AR +FD +  K  
Sbjct: 139 AKACGASGDASRVKEVHDDAIRCGMMSDAFLGNALIHAYGKCKCVEGARRVFDDLVVKDV 198

Query: 479 VTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQS 538
           V+W +M S Y   G     L +F EM  +G++P+ VT  S+L ACS    ++ G  I   
Sbjct: 199 VSWTSMSSCYVNCGLPRLGLAVFCEMGWNGVKPNSVTLSSILPACSELKDLKSGRAIHGF 258

Query: 539 MIHDHGFKPLAEHYACMVDILGRAGQLEKA-------------------------LEFIK 573
            +  HG        + +V +  R   +++A                          E+ K
Sbjct: 259 AVR-HGMIENVFVCSALVSLYARCLSVKQARLVFDLMPHRDVVSWNGVLTAYFTNREYDK 317

Query: 574 GLA---------VEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGY 617
           GLA         VE   A W A++G CM +  T  A     K+     +N+G+
Sbjct: 318 GLALFSQMSSKGVEADEATWNAVIGGCMENGQTEKAVEMLRKM-----QNLGF 365


>gi|414873128|tpg|DAA51685.1| TPA: hypothetical protein ZEAMMB73_445170 [Zea mays]
          Length = 987

 Score =  451 bits (1160), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 254/710 (35%), Positives = 391/710 (55%), Gaps = 69/710 (9%)

Query: 142 DLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMV 201
           + F   +L+ LY K   +  A  VF +MP++D V W  MI GL ++  F D++  F DMV
Sbjct: 280 NAFTWNSLLSLYAKSGRLPDAHVVFAEMPDRDAVSWTIMIVGLNRSGRFWDAVKTFLDMV 339

Query: 202 RNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEV 261
             G       ++  VL + A ++   +G ++    +KLG    V V   ++  Y KCG+ 
Sbjct: 340 SEGFA-PSQFTLTNVLSSCAAMEACGVGRKVHPFVVKLGLSSCVPVANSVLYMYGKCGDA 398

Query: 262 E----------------------------RAEL---LFRDIVRPDLISCNAMISGYTCNG 290
           E                            R EL   +F ++V   ++S N +I+GY  NG
Sbjct: 399 ETARAVFERMQVRSVSSWNVMVSLYTHQGRMELAVSMFENMVERSIVSWNTIIAGYNQNG 458

Query: 291 KTESSLRLF-RQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVL 349
               +L+ F R L AS+   ++ T+  ++        L +   +HS+ L++G+  +S ++
Sbjct: 459 LDGMALKFFSRMLSASSMEPDAFTVTSVLSACANLRMLKMGKQMHSYILRTGMPCSSQIM 518

Query: 350 TALSTVYSRLNEMEAARKLFDES---------------------------------SEKS 376
            AL + Y++   +E AR++ D++                                 + + 
Sbjct: 519 NALISTYAKSGSVETARRIMDQAVVADLNVISFTALLEGYVKLGDTKQAREIFDIMNNRD 578

Query: 377 LASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVH- 435
           + +W AMI GY QNG  +EA+ LF+ M      PN  T++++LSACA L  +  GK +H 
Sbjct: 579 VIAWTAMIVGYHQNGQNDEAMELFRSMILIGPEPNSHTLAAVLSACASLAYLDYGKQIHC 638

Query: 436 ELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSE-VTWNTMISGYGLHGHG 494
           + ++S   E ++ VS A+I +YA+ G++  AR +FD +  + E +TW +MI     HG G
Sbjct: 639 KAIRSLQ-EQSVSVSNAIITVYARSGSVPLARRVFDQICWRKETITWTSMIVAMAQHGLG 697

Query: 495 LEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYAC 554
            +A+ LF EM+  G++P  +T++ VL AC+HAG V +G   ++ M ++HG  P   HYAC
Sbjct: 698 EQAVVLFEEMVRVGVKPDHITYVGVLSACAHAGFVDKGKRYYEQMQNEHGIVPQMSHYAC 757

Query: 555 MVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPEN 614
           MVD+  RAG L +A EFI+ + V P   VWG+LL AC + K+ +LA +A+ KL  +DP N
Sbjct: 758 MVDLHARAGLLTEAHEFIQRMPVAPDTVVWGSLLAACRVRKNADLAELAAGKLLSIDPHN 817

Query: 615 VGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQS 674
            G +  L+N+YSA   +  AA + ++ K + + K  G +   V G  HVF + D LHPQ 
Sbjct: 818 SGAYSALANVYSACGRWNDAARIWKLRKDKGVKKETGFSWTHVRGKVHVFGADDVLHPQR 877

Query: 675 TAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTE 734
            +IY    ++  ++++AGF  +  + LHDV++E KE ++  HSEKLAIAFGLI+T   T 
Sbjct: 878 DSIYRKAAEMWEEIKKAGFVPDLNSVLHDVDDELKEELLSRHSEKLAIAFGLISTPEKTT 937

Query: 735 IRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           +RI+KNLRVC DCHTA KFISK   R I+VRDA RFHHF+ G CSC DYW
Sbjct: 938 LRIMKNLRVCNDCHTAIKFISKFVDREIIVRDATRFHHFRDGYCSCKDYW 987



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 123/516 (23%), Positives = 223/516 (43%), Gaps = 74/516 (14%)

Query: 39  NDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHL 98
           N L ++   + RL D      A  +F  +P  D   + ++I G + +     ++  +  +
Sbjct: 285 NSLLSLYAKSGRLPD------AHVVFAEMPDRDAVSWTIMIVGLNRSGRFWDAVKTFLDM 338

Query: 99  RKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSW 158
             +    P  FT + VLS+ +A     +G  +H   +  G  S + V  +++ +Y K   
Sbjct: 339 -VSEGFAPSQFTLTNVLSSCAAMEACGVGRKVHPFVVKLGLSSCVPVANSVLYMYGKCGD 397

Query: 159 VKSARKVFDKMP-------------------------------EKDTVLWNSMISGLMKN 187
            ++AR VF++M                                E+  V WN++I+G  +N
Sbjct: 398 AETARAVFERMQVRSVSSWNVMVSLYTHQGRMELAVSMFENMVERSIVSWNTIIAGYNQN 457

Query: 188 CCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYV 247
                ++  F  M+       D+ +V +VL A A ++ L++G ++    L+ G      +
Sbjct: 458 GLDGMALKFFSRMLSASSMEPDAFTVTSVLSACANLRMLKMGKQMHSYILRTGMPCSSQI 517

Query: 248 LTGLVSFYSKCGEVERAELLFRDIVRPDL------------------------------- 276
           +  L+S Y+K G VE A  +    V  DL                               
Sbjct: 518 MNALISTYAKSGSVETARRIMDQAVVADLNVISFTALLEGYVKLGDTKQAREIFDIMNNR 577

Query: 277 --ISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIH 334
             I+  AMI GY  NG+ + ++ LFR ++      NS T+  ++       +L     IH
Sbjct: 578 DVIAWTAMIVGYHQNGQNDEAMELFRSMILIGPEPNSHTLAAVLSACASLAYLDYGKQIH 637

Query: 335 SFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDE-SSEKSLASWNAMIAGYTQNGLT 393
              ++S    + SV  A+ TVY+R   +  AR++FD+    K   +W +MI    Q+GL 
Sbjct: 638 CKAIRSLQEQSVSVSNAIITVYARSGSVPLARRVFDQICWRKETITWTSMIVAMAQHGLG 697

Query: 394 EEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRN-FESNIYVSTA 452
           E+A+ LF+EM    V P+ +T   +LSACA  G +  GK  +E +++ +     +     
Sbjct: 698 EQAVVLFEEMVRVGVKPDHITYVGVLSACAHAGFVDKGKRYYEQMQNEHGIVPQMSHYAC 757

Query: 453 LIDMYAKCGNIVEARELFDLMSHKSE-VTWNTMISG 487
           ++D++A+ G + EA E    M    + V W ++++ 
Sbjct: 758 MVDLHARAGLLTEAHEFIQRMPVAPDTVVWGSLLAA 793



 Score =  106 bits (265), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 108/456 (23%), Positives = 198/456 (43%), Gaps = 79/456 (17%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           A ++F ++ +  +  +N II G++ N +   ++ F++ +   +++ PD FT + VLSA +
Sbjct: 432 AVSMFENMVERSIVSWNTIIAGYNQNGLDGMALKFFSRMLSASSMEPDAFTVTSVLSACA 491

Query: 120 ACCDRSIGVLLHGH--------------AIVSGYG-----------------SDLFVGA- 147
                 +G  +H +              A++S Y                  +DL V + 
Sbjct: 492 NLRMLKMGKQMHSYILRTGMPCSSQIMNALISTYAKSGSVETARRIMDQAVVADLNVISF 551

Query: 148 -ALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGT 206
            AL++ Y K    K AR++FD M  +D + W +MI G  +N    +++ +F  M+  G  
Sbjct: 552 TALLEGYVKLGDTKQAREIFDIMNNRDVIAWTAMIVGYHQNGQNDEAMELFRSMILIGPE 611

Query: 207 WLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAEL 266
             +S ++AAVL A A +  L  G +I C  ++      V V   +++ Y++ G V  A  
Sbjct: 612 -PNSHTLAAVLSACASLAYLDYGKQIHCKAIRSLQEQSVSVSNAIITVYARSGSVPLARR 670

Query: 267 LFRDIV-RPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFG 325
           +F  I  R + I+  +MI     +G  E ++ LF +++    + +  T VG+        
Sbjct: 671 VFDQICWRKETITWTSMIVAMAQHGLGEQAVVLFEEMVRVGVKPDHITYVGV-------- 722

Query: 326 HLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIA 385
              L+ C H+  +  G              Y ++          +      ++ +  M+ 
Sbjct: 723 ---LSACAHAGFVDKG-----------KRYYEQMQN--------EHGIVPQMSHYACMVD 760

Query: 386 GYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSAC-----AQLGAISLGKWVHELVKS 440
            + + GL  EA    Q M    VAP+ V   S+L+AC     A L  ++ GK    L+  
Sbjct: 761 LHARAGLLTEAHEFIQRM---PVAPDTVVWGSLLAACRVRKNADLAELAAGK----LLSI 813

Query: 441 RNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHK 476
               S  Y  +AL ++Y+ CG   +A  ++ L   K
Sbjct: 814 DPHNSGAY--SALANVYSACGRWNDAARIWKLRKDK 847


>gi|356498743|ref|XP_003518209.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Glycine max]
          Length = 573

 Score =  451 bits (1159), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 228/538 (42%), Positives = 323/538 (60%), Gaps = 1/538 (0%)

Query: 247 VLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASA 306
           +   L+  Y++   ++ A  LF  +   D  + + M+ G+   G        FR+LL   
Sbjct: 37  IANKLLYTYAQHKAIDDAYSLFDGLTMRDSKTWSVMVGGFAKAGDHAGCYATFRELLRCG 96

Query: 307 ERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAAR 366
              ++ T+  +I        L +   IH   LK G++S+  V  +L  +Y++   +E A+
Sbjct: 97  VTPDNYTLPFVIRTCRDRTDLQIGRVIHDVVLKHGLLSDHFVCASLVDMYAKCIVVEDAQ 156

Query: 367 KLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLG 426
           +LF+    K L +W  MI  Y       E++ LF  M+   V P+ V + ++++ACA+LG
Sbjct: 157 RLFERMLSKDLVTWTVMIGAYADCN-AYESLVLFDRMREEGVVPDKVAMVTVVNACAKLG 215

Query: 427 AISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMIS 486
           A+   ++ ++ +    F  ++ + TA+IDMYAKCG++  ARE+FD M  K+ ++W+ MI+
Sbjct: 216 AMHRARFANDYIVRNGFSLDVILGTAMIDMYAKCGSVESAREVFDRMKEKNVISWSAMIA 275

Query: 487 GYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFK 546
            YG HG G +A+ LF  ML   I P+ VTF+S+LYACSHAGL+ EG   F SM  +H  +
Sbjct: 276 AYGYHGRGKDAIDLFHMMLSCAILPNRVTFVSLLYACSHAGLIEEGLRFFNSMWEEHAVR 335

Query: 547 PLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEK 606
           P  +HY CMVD+LGRAG+L++AL  I+ + VE    +W ALLGAC IH    LA  A+  
Sbjct: 336 PDVKHYTCMVDLLGRAGRLDEALRLIEAMTVEKDERLWSALLGACRIHSKMELAEKAANS 395

Query: 607 LFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTS 666
           L EL P+N G++VLLSNIY+    + + A  R ++ +RKL K PG T IEV    + F+ 
Sbjct: 396 LLELQPQNPGHYVLLSNIYAKAGKWEKVAKFRDMMTQRKLKKIPGWTWIEVDNKTYQFSV 455

Query: 667 GDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGL 726
           GD+ HPQS  IY ML  L  K+  AG+  +T   L DVEEE K+ M+  HSEKLAIAFGL
Sbjct: 456 GDRSHPQSKEIYEMLMSLIKKLEMAGYVPDTDFVLQDVEEEVKQEMLYTHSEKLAIAFGL 515

Query: 727 IATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           IA   G  IRI KNLRVC DCHT +K +S +  R I+VRDANRFHHF  G CSCGDYW
Sbjct: 516 IAIPEGEPIRISKNLRVCGDCHTFSKMVSSIMRRSIIVRDANRFHHFNDGTCSCGDYW 573



 Score =  135 bits (340), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 120/465 (25%), Positives = 210/465 (45%), Gaps = 39/465 (8%)

Query: 13  LSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDL 72
           + LL   +    + Q HA ++ +G   DL    KL +  +  KA   A +LF  +   D 
Sbjct: 7   IDLLLRCRNVFHIRQVHAHVVANGTLQDLVIANKLLYTYAQHKAIDDAYSLFDGLTMRDS 66

Query: 73  FLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHG 132
             ++V++ GF+           +  L +   +TPDN+T  FV+       D  IG ++H 
Sbjct: 67  KTWSVMVGGFAKAGDHAGCYATFRELLR-CGVTPDNYTLPFVIRTCRDRTDLQIGRVIHD 125

Query: 133 HAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQD 192
             +  G  SD FV A+LVD+Y K   V+ A+++F++M  KD V W  MI G   +C   +
Sbjct: 126 VVLKHGLLSDHFVCASLVDMYAKCIVVEDAQRLFERMLSKDLVTWTVMI-GAYADCNAYE 184

Query: 193 SIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLV 252
           S+ +F D +R  G   D  ++  V+ A A++  +          ++ GF   V + T ++
Sbjct: 185 SLVLF-DRMREEGVVPDKVAMVTVVNACAKLGAMHRARFANDYIVRNGFSLDVILGTAMI 243

Query: 253 SFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSS 312
             Y+KCG VE A  +F  +   ++IS +AMI+ Y  +G+ + ++ LF  +L+ A   N  
Sbjct: 244 DMYAKCGSVESAREVFDRMKEKNVISWSAMIAAYGYHGRGKDAIDLFHMMLSCAILPNRV 303

Query: 313 TIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDES 372
           T V L           L  C H+  ++ G+             ++ + E  A R      
Sbjct: 304 TFVSL-----------LYACSHAGLIEEGL-----------RFFNSMWEEHAVR------ 335

Query: 373 SEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLG- 431
               +  +  M+    + G  +EA+ L + M   K   +    S++L AC     + L  
Sbjct: 336 --PDVKHYTCMVDLLGRAGRLDEALRLIEAMTVEK---DERLWSALLGACRIHSKMELAE 390

Query: 432 KWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHK 476
           K  + L++ +      YV   L ++YAK G   +  +  D+M+ +
Sbjct: 391 KAANSLLELQPQNPGHYV--LLSNIYAKAGKWEKVAKFRDMMTQR 433



 Score =  112 bits (279), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 67/262 (25%), Positives = 122/262 (46%), Gaps = 3/262 (1%)

Query: 333 IHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGL 392
           +H+  + +G + +  +   L   Y++   ++ A  LFD  + +   +W+ M+ G+ + G 
Sbjct: 22  VHAHVVANGTLQDLVIANKLLYTYAQHKAIDDAYSLFDGLTMRDSKTWSVMVGGFAKAGD 81

Query: 393 TEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTA 452
                + F+E+    V P+  T+  ++  C     + +G+ +H++V      S+ +V  +
Sbjct: 82  HAGCYATFRELLRCGVTPDNYTLPFVIRTCRDRTDLQIGRVIHDVVLKHGLLSDHFVCAS 141

Query: 453 LIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPS 512
           L+DMYAKC  + +A+ LF+ M  K  VTW  MI  Y    +  E+L LF  M   G+ P 
Sbjct: 142 LVDMYAKCIVVEDAQRLFERMLSKDLVTWTVMIGAYA-DCNAYESLVLFDRMREEGVVPD 200

Query: 513 GVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFI 572
            V  ++V+ AC+  G +          I  +GF         M+D+  + G +E A E  
Sbjct: 201 KVAMVTVVNACAKLGAMHRA-RFANDYIVRNGFSLDVILGTAMIDMYAKCGSVESAREVF 259

Query: 573 KGLAVEPGPAVWGALLGACMIH 594
             +  E     W A++ A   H
Sbjct: 260 DRMK-EKNVISWSAMIAAYGYH 280


>gi|359484341|ref|XP_002280538.2| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Vitis vinifera]
 gi|297738773|emb|CBI28018.3| unnamed protein product [Vitis vinifera]
          Length = 695

 Score =  451 bits (1159), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 247/644 (38%), Positives = 367/644 (56%), Gaps = 37/644 (5%)

Query: 142 DLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMV 201
           D+F   A++  Y K   V+  R VFD+M   D V +N++I+G   N C   ++  F  M 
Sbjct: 88  DVFSWNAMLSAYSKSGNVEDLRAVFDQMSVHDAVSYNTVIAGFSGNGCSSQALEFFVRMQ 147

Query: 202 RNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEV 261
             G    D T V+ VL A +++ +++ G +I    +     + V+V   L + Y+KCG +
Sbjct: 148 EEGFESTDYTHVS-VLHACSQLLDIKRGKQIHGRIVATSLGESVFVWNALTNMYAKCGAL 206

Query: 262 ERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVF 321
           ++A  LF  +V  +++S N+MISGY  NG+ E+  +LF ++ +S          GL+P  
Sbjct: 207 DQARWLFDRMVNKNVVSWNSMISGYLQNGQPETCTKLFCEMQSS----------GLMP-- 254

Query: 322 YPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWN 381
                                V+ S++L+A    Y +   ++ A K F E  EK    W 
Sbjct: 255 -------------------DQVTISNILSA----YFQCGYIDEACKTFREIKEKDKVCWT 291

Query: 382 AMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSR 441
            M+ G  QNG  E+A+ LF+EM    V P+  T+SS++S+CA+L ++  G+ VH      
Sbjct: 292 TMMVGCAQNGKEEDALLLFREMLLENVRPDNFTISSVVSSCARLASLCQGQAVHGKAVIF 351

Query: 442 NFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLF 501
             + ++ VS+AL+DMY+KCG   +A  +F  M  ++ ++WN+MI GY  +G  LEAL L+
Sbjct: 352 GVDHDLLVSSALVDMYSKCGETADAWIVFKRMLTRNVISWNSMILGYAQNGKDLEALALY 411

Query: 502 SEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGR 561
            EMLH  ++P  +TF+ VL AC HAGLV  G   F S+   HG  P  +HY+CM+++LGR
Sbjct: 412 EEMLHENLKPDNITFVGVLSACMHAGLVERGQGYFYSISKIHGMNPTFDHYSCMINLLGR 471

Query: 562 AGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLL 621
           AG ++KA++ IK +  EP   +W  LL  C I+ D N   +A+  LFELDP N G +++L
Sbjct: 472 AGYMDKAVDLIKSMTFEPNCLIWSTLLSVCRINCDVNNGEMAARHLFELDPHNAGPYIML 531

Query: 622 SNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAML 681
           SNIY+A   +   A VR ++K  K+ K    + IE+    H F + D+ H ++  IY  L
Sbjct: 532 SNIYAACGRWKDVAAVRSLMKNNKIKKFAAYSWIEIDNQVHKFVAEDRTHSETEQIYEEL 591

Query: 682 EKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPG-TEIRIIKN 740
            +L  K++E+GF  +T   LHDV EEEK   +  HSEKLA+AF LI    G T IRI+KN
Sbjct: 592 NRLIKKLQESGFTPDTNLVLHDVVEEEKFDSICYHSEKLALAFWLIKKPHGRTPIRIMKN 651

Query: 741 LRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           +RVC DCH   KF+SK+  R I++RD NRFHHF  G CSC D W
Sbjct: 652 IRVCGDCHVFMKFVSKIIRRPIILRDINRFHHFIEGRCSCKDSW 695



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 115/428 (26%), Positives = 202/428 (47%), Gaps = 39/428 (9%)

Query: 61  RALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASA 120
           RA+F  +   D   +N +I GFS N     ++ F+  +++    + D +T+  VL A S 
Sbjct: 109 RAVFDQMSVHDAVSYNTVIAGFSGNGCSSQALEFFVRMQEEGFESTD-YTHVSVLHACSQ 167

Query: 121 CCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSM 180
             D   G  +HG  + +  G  +FV  AL ++Y K   +  AR +FD+M  K+ V WNSM
Sbjct: 168 LLDIKRGKQIHGRIVATSLGESVFVWNALTNMYAKCGALDQARWLFDRMVNKNVVSWNSM 227

Query: 181 ISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLG 240
           ISG ++N   +    +F +M  +G           ++P                      
Sbjct: 228 ISGYLQNGQPETCTKLFCEMQSSG-----------LMP---------------------- 254

Query: 241 FHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFR 300
             D V  ++ ++S Y +CG ++ A   FR+I   D +    M+ G   NGK E +L LFR
Sbjct: 255 --DQV-TISNILSAYFQCGYIDEACKTFREIKEKDKVCWTTMMVGCAQNGKEEDALLLFR 311

Query: 301 QLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLN 360
           ++L    R ++ TI  ++        L     +H   +  G+  +  V +AL  +YS+  
Sbjct: 312 EMLLENVRPDNFTISSVVSSCARLASLCQGQAVHGKAVIFGVDHDLLVSSALVDMYSKCG 371

Query: 361 EMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILS 420
           E   A  +F     +++ SWN+MI GY QNG   EA++L++EM    + P+ +T   +LS
Sbjct: 372 ETADAWIVFKRMLTRNVISWNSMILGYAQNGKDLEALALYEEMLHENLKPDNITFVGVLS 431

Query: 421 ACAQLGAISLGK-WVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSE- 478
           AC   G +  G+ + + + K           + +I++  + G + +A +L   M+ +   
Sbjct: 432 ACMHAGLVERGQGYFYSISKIHGMNPTFDHYSCMINLLGRAGYMDKAVDLIKSMTFEPNC 491

Query: 479 VTWNTMIS 486
           + W+T++S
Sbjct: 492 LIWSTLLS 499


>gi|302786876|ref|XP_002975209.1| hypothetical protein SELMODRAFT_102435 [Selaginella moellendorffii]
 gi|300157368|gb|EFJ23994.1| hypothetical protein SELMODRAFT_102435 [Selaginella moellendorffii]
          Length = 805

 Score =  450 bits (1158), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 265/731 (36%), Positives = 399/731 (54%), Gaps = 18/731 (2%)

Query: 63  LFFSIPKPDLFLFNVIIRGFSNNEMPKSSIC-FYTHLRKNTALTPDNFTYSFVLSAASAC 121
           +F  I    + L+ V+I  + +     ++I  F+  L++  AL  D   +  VLSA S+ 
Sbjct: 84  VFHKIAHKSIVLWTVLISAYVSRGHSAAAIALFHRILQEGIAL--DAIVFVSVLSACSSE 141

Query: 122 CDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEK-DTVLWNSM 180
              + G L+H  A+ +G G    V +ALV +Y +   ++ A  +F  +    D VLWN+M
Sbjct: 142 EFLAAGRLIHRCAVEAGLGLQEIVASALVSMYGRCGSLRDANALFGHLERHLDVVLWNAM 201

Query: 181 ISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQ----CLG 236
           I+   +N   ++++ +F  M++ G    D  +  +V  A +    LR   +++    CL 
Sbjct: 202 ITANSQNGSPREALEIFYRMLQLG-IPPDLVTFVSVFKACSSSPSLR-ASQVKGFHTCLD 259

Query: 237 LKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSL 296
            + G    V V T LV+ Y++CGE++ A   F  +   + +S  +MI+ +   G    ++
Sbjct: 260 -ETGLGSDVVVATALVNAYARCGEIDCAREFFAAMPERNAVSWTSMIAAFAQIGHL-LAV 317

Query: 297 RLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVY 356
             F  +L        ST   L         LH    + +   + G+ ++ +++T L   Y
Sbjct: 318 ETFHAMLLEGVVPTRST---LFAALEGCEDLHTARLVEAIAQEIGVATDVAIVTDLVMAY 374

Query: 357 SRLNEMEAARKLFD--ESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVT 414
           +R +  E A ++F   E  E   A   AMIA Y Q         L+       ++P+ + 
Sbjct: 375 ARCDGQEDAIRVFSAREEGEWDAALVTAMIAVYAQCRDRRSTFKLWGAAIERGISPDRIL 434

Query: 415 VSSILSACAQLGAISLGKWVHELVKS-RNFESNIYVSTALIDMYAKCGNIVEARELFDLM 473
             + L ACA L A+S G+ +H  V + R  + ++ +  A++ MY +CG++ +AR+ FD M
Sbjct: 435 YITALDACASLAALSEGRQIHACVAADRRLDRDVTLGNAIVSMYGQCGSLRDARDAFDGM 494

Query: 474 SHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGD 533
             + E++WN M+S    HG   +   LF  ML  G     V FL++L AC+HAGLV  G 
Sbjct: 495 PARDEISWNAMLSASAQHGRVEDCCDLFRAMLQEGFDAERVAFLNLLSACAHAGLVEAGC 554

Query: 534 EIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMI 593
           E F +M  DHG  P  EHY CMVD+LGR G+L  A   ++ + V P  A W AL+GAC I
Sbjct: 555 EHFSAMTGDHGVVPATEHYGCMVDLLGRKGRLADAHGIVQAMPVPPDAATWMALMGACRI 614

Query: 594 HKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCT 653
           + DT   R A+E++ EL   +   +V L NIYSA   +  AA VR+++    L K PG +
Sbjct: 615 YGDTERGRFAAERVLELRANHTAAYVALCNIYSAAGRWEDAAAVRKIMADLGLRKIPGVS 674

Query: 654 LIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMM 713
            IE+    H F   D+ HPQS AIYA LE++ G +  AG++  T   LHDVEEE+KE ++
Sbjct: 675 SIEIRSKVHEFVVRDRSHPQSEAIYAELERVMGAIERAGYRAVTGEVLHDVEEEQKEQLL 734

Query: 714 KVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHF 773
           + HSEKLAIAFG+++T  G+ +R+IKNLRVC+DCH A+KFISKV GR IVVRD  RFHHF
Sbjct: 735 RFHSEKLAIAFGMMSTPQGSTLRVIKNLRVCVDCHNASKFISKVFGREIVVRDVRRFHHF 794

Query: 774 KGGVCSCGDYW 784
           K G CSCGDYW
Sbjct: 795 KDGACSCGDYW 805



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 85/297 (28%), Positives = 142/297 (47%), Gaps = 4/297 (1%)

Query: 246 YVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLAS 305
           Y+ + LV  Y +CG +E A  +F  I    ++    +IS Y   G + +++ LF ++L  
Sbjct: 63  YLASSLVYMYLRCGSLESAIDVFHKIAHKSIVLWTVLISAYVSRGHSAAAIALFHRILQE 122

Query: 306 AERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAA 365
              +++   V ++        L     IH   +++G+     V +AL ++Y R   +  A
Sbjct: 123 GIALDAIVFVSVLSACSSEEFLAAGRLIHRCAVEAGLGLQEIVASALVSMYGRCGSLRDA 182

Query: 366 RKLFDESSEK-SLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQ 424
             LF        +  WNAMI   +QNG   EA+ +F  M    + P+ VT  S+  AC+ 
Sbjct: 183 NALFGHLERHLDVVLWNAMITANSQNGSPREALEIFYRMLQLGIPPDLVTFVSVFKACSS 242

Query: 425 LGAI--SLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWN 482
             ++  S  K  H  +      S++ V+TAL++ YA+CG I  ARE F  M  ++ V+W 
Sbjct: 243 SPSLRASQVKGFHTCLDETGLGSDVVVATALVNAYARCGEIDCAREFFAAMPERNAVSWT 302

Query: 483 TMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSM 539
           +MI+ +   GH L A++ F  ML  G+ P+  T  + L  C      R  + I Q +
Sbjct: 303 SMIAAFAQIGH-LLAVETFHAMLLEGVVPTRSTLFAALEGCEDLHTARLVEAIAQEI 358



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 71/243 (29%), Positives = 121/243 (49%), Gaps = 3/243 (1%)

Query: 350 TALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVA 409
           ++L  +Y R   +E+A  +F + + KS+  W  +I+ Y   G +  AI+LF  +    +A
Sbjct: 66  SSLVYMYLRCGSLESAIDVFHKIAHKSIVLWTVLISAYVSRGHSAAAIALFHRILQEGIA 125

Query: 410 PNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEAREL 469
            + +   S+LSAC+    ++ G+ +H             V++AL+ MY +CG++ +A  L
Sbjct: 126 LDAIVFVSVLSACSSEEFLAAGRLIHRCAVEAGLGLQEIVASALVSMYGRCGSLRDANAL 185

Query: 470 FD-LMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGL 528
           F  L  H   V WN MI+    +G   EAL++F  ML  GI P  VTF+SV  ACS +  
Sbjct: 186 FGHLERHLDVVLWNAMITANSQNGSPREALEIFYRMLQLGIPPDLVTFVSVFKACSSSPS 245

Query: 529 VREGD-EIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGAL 587
           +R    + F + + + G          +V+   R G+++ A EF   +  E     W ++
Sbjct: 246 LRASQVKGFHTCLDETGLGSDVVVATALVNAYARCGEIDCAREFFAAMP-ERNAVSWTSM 304

Query: 588 LGA 590
           + A
Sbjct: 305 IAA 307


>gi|224070863|ref|XP_002303270.1| predicted protein [Populus trichocarpa]
 gi|222840702|gb|EEE78249.1| predicted protein [Populus trichocarpa]
          Length = 805

 Score =  450 bits (1158), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 257/789 (32%), Positives = 429/789 (54%), Gaps = 19/789 (2%)

Query: 3   MKTPQSRNLFLSLLKGAKTQSQLTQTHAQIIIHGFQNDLST-VTKLAHRLSDFKATCYAR 61
           +K P   + F++L++  + +   ++       + ++  LS+ VT L+ RL +   + + R
Sbjct: 27  VKIPVEEDCFVALIRLCENKRGYSEGE-----YVWKAVLSSLVTLLSVRLGNALLSMFVR 81

Query: 62  --------ALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSF 113
                    +F  + + DLF +NV++ G++       ++C Y H      + PD +T+  
Sbjct: 82  FGDVGNAWNVFGRMGERDLFSWNVLVGGYTKAGFFDEALCLY-HRILWAGIRPDVYTFPS 140

Query: 114 VLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKD 173
           VL + +   D   G  +H H +   +  D+ V  AL+ +Y K   V SAR +FDKMP +D
Sbjct: 141 VLRSCAGAMDLVRGREVHAHVVRFDFDMDVDVVNALITMYVKCGDVVSARMLFDKMPTRD 200

Query: 174 TVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQ 233
            + WN+MISG  +N    + + +F  M R      D  ++ +V+ A   + + RLG ++ 
Sbjct: 201 RISWNAMISGYFENDECLEGLELFFRM-RELSIDPDLMTMTSVISACELLGDERLGTQLH 259

Query: 234 CLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTE 293
              ++  +  ++ V   L+  Y   G  + AE +F  +   D++S   +ISG   N   +
Sbjct: 260 SYVVRTAYDGNISVYNSLIQMYLSVGHWKEAESVFSGMECRDVVSWTTIISGCVDNLLPD 319

Query: 294 SSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALS 353
            +L  ++ +  +    +  TI  ++      G L +   +H    ++G +    V  +L 
Sbjct: 320 KALETYKTMEITGTMPDEVTIASVLSACASLGQLDMGMKLHELAERTGHILYVVVANSLI 379

Query: 354 TVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPV 413
            +YS+   +E A ++F +  +K + SW ++I G   N    EA+  F++M   K  PN V
Sbjct: 380 DMYSKCKRIEKALEIFHQIPDKDVISWTSVINGLRINNRCFEALIFFRKM-ILKSKPNSV 438

Query: 414 TVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLM 473
           T+ S LSACA++GA+  GK +H          + ++  A++D+Y +CG +  A   F+L 
Sbjct: 439 TLISALSACARVGALMCGKEIHAHALKAGMGFDGFLPNAILDLYVRCGRMRTALNQFNL- 497

Query: 474 SHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGD 533
           + K    WN +++GY   G G   ++LF  M+ S I P  VTF+S+L ACS +G+V EG 
Sbjct: 498 NEKDVGAWNILLTGYAQKGKGAMVMELFKRMVESEINPDDVTFISLLCACSRSGMVTEGL 557

Query: 534 EIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMI 593
           E FQ M  ++   P  +HYAC+VD+LGRAG+L +A EFI+ + ++P PA+WGALL AC I
Sbjct: 558 EYFQRMKVNYHITPNLKHYACVVDLLGRAGKLNEAHEFIERMPIKPDPAIWGALLNACRI 617

Query: 594 HKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCT 653
           H+   L  +A++ +F+ D E++GY++LL N+Y+    + + A VR+ +K+  L   PGC+
Sbjct: 618 HRHVLLGELAAQHIFKQDAESIGYYILLCNLYADSGKWDEVAKVRRTMKEEGLIVDPGCS 677

Query: 654 LIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMM 713
            +EV G  H F SGD  HPQ   I  +LE    KM+ +GF  +  +++  ++  + ++  
Sbjct: 678 WVEVKGKVHAFLSGDNFHPQMQEINVVLEGFYEKMKTSGFNGQECSSMDGIQTSKADIFC 737

Query: 714 KVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHF 773
             HSE+ AIA+ LI + PG  I + KNL +C  CH+  KFISK+  R I VRD  +FHHF
Sbjct: 738 G-HSERQAIAYSLINSAPGMPIWVTKNLYMCQSCHSTVKFISKIVRREISVRDTEQFHHF 796

Query: 774 KGGVCSCGD 782
           K G+CSCGD
Sbjct: 797 KDGLCSCGD 805


>gi|356519586|ref|XP_003528453.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g33760-like [Glycine max]
          Length = 582

 Score =  450 bits (1158), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 226/546 (41%), Positives = 345/546 (63%), Gaps = 1/546 (0%)

Query: 240 GFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLF 299
           G H    +LT L++     G +     LFR +  PD    N++I   +  G +  ++  +
Sbjct: 37  GCHRSRALLTKLLTLSCAAGSIAYTRRLFRSVSDPDSFLFNSLIKASSNFGFSLDAVFFY 96

Query: 300 RQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRL 359
           R++L S    ++ T   +I        L L   +HS    SG  SNS V  AL T Y++ 
Sbjct: 97  RRMLHSRIVPSTYTFTSVIKACADLSLLRLGTIVHSHVFVSGYASNSFVQAALVTFYAKS 156

Query: 360 NEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSIL 419
                ARK+FDE  ++S+ +WN+MI+GY QNGL  EA+ +F +M+ S   P+  T  S+L
Sbjct: 157 CTPRVARKVFDEMPQRSIIAWNSMISGYEQNGLASEAVEVFNKMRESGGEPDSATFVSVL 216

Query: 420 SACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEV 479
           SAC+QLG++ LG W+HE +       N+ ++T+L++M+++CG++  AR +FD M+  + V
Sbjct: 217 SACSQLGSLDLGCWLHECIVGTGIRMNVVLATSLVNMFSRCGDVGRARAVFDSMNEGNVV 276

Query: 480 TWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSM 539
           +W  MISGYG+HG+G+EA+++F  M   G+ P+ VT+++VL AC+HAGL+ EG  +F SM
Sbjct: 277 SWTAMISGYGMHGYGVEAMEVFHRMKACGVVPNRVTYVAVLSACAHAGLINEGRLVFASM 336

Query: 540 IHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEP-GPAVWGALLGACMIHKDTN 598
             ++G  P  EH+ CMVD+ GR G L +A +F++GL+ E   PAVW A+LGAC +HK+ +
Sbjct: 337 KQEYGVVPGVEHHVCMVDMFGRGGLLNEAYQFVRGLSSEELVPAVWTAMLGACKMHKNFD 396

Query: 599 LARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVG 658
           L    +E L   +PEN G++VLLSN+Y+      +  +VR V+ +R L K  G + I+V 
Sbjct: 397 LGVEVAENLISAEPENPGHYVLLSNMYALAGRMDRVESVRNVMIQRGLKKQVGYSTIDVE 456

Query: 659 GTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSE 718
              ++F+ GD+ HP++  IY  L++L  + ++AG+     +A+H++EEEE+E  ++ HSE
Sbjct: 457 NRSYLFSMGDKSHPETNEIYCYLDELMWRCKDAGYAPAPESAMHELEEEEREYALRYHSE 516

Query: 719 KLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVC 778
           KLA+AFGL+ T  G  +RI+KNLR+C DCH+A KFIS V  R I+VRD  RFHHF+ G C
Sbjct: 517 KLAVAFGLMKTCHGVTLRIVKNLRICEDCHSAIKFISVVMNREIIVRDKLRFHHFREGSC 576

Query: 779 SCGDYW 784
           SC DYW
Sbjct: 577 SCSDYW 582



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 131/465 (28%), Positives = 220/465 (47%), Gaps = 40/465 (8%)

Query: 24  QLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFS 83
           +L Q HA +++ G     + +TKL        +  Y R LF S+  PD FLFN +I+  S
Sbjct: 25  RLQQAHAHLVVTGCHRSRALLTKLLTLSCAAGSIAYTRRLFRSVSDPDSFLFNSLIKASS 84

Query: 84  NNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDL 143
           N      ++ FY  +  ++ + P  +T++ V+ A +      +G ++H H  VSGY S+ 
Sbjct: 85  NFGFSLDAVFFYRRM-LHSRIVPSTYTFTSVIKACADLSLLRLGTIVHSHVFVSGYASNS 143

Query: 144 FVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRN 203
           FV AALV  Y K    + ARKVFD+MP++  + WNSMISG  +N    +++ VF  M  +
Sbjct: 144 FVQAALVTFYAKSCTPRVARKVFDEMPQRSIIAWNSMISGYEQNGLASEAVEVFNKMRES 203

Query: 204 GGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVER 263
           GG   DS +  +VL A +++  L LG  +    +  G   +V + T LV+ +S+CG+V R
Sbjct: 204 GGE-PDSATFVSVLSACSQLGSLDLGCWLHECIVGTGIRMNVVLATSLVNMFSRCGDVGR 262

Query: 264 AELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYP 323
           A  +F  +   +++S  AMISGY  +G    ++ +F ++ A     N  T V +      
Sbjct: 263 ARAVFDSMNEGNVVSWTAMISGYGMHGYGVEAMEVFHRMKACGVVPNRVTYVAV------ 316

Query: 324 FGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAM 383
                L+ C H+  +  G +    V  ++   Y  +  +E                   M
Sbjct: 317 -----LSACAHAGLINEGRL----VFASMKQEYGVVPGVE---------------HHVCM 352

Query: 384 IAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHE-LVKSRN 442
           +  + + GL  EA    + + + ++ P   T  ++L AC       LG  V E L+ +  
Sbjct: 353 VDMFGRGGLLNEAYQFVRGLSSEELVPAVWT--AMLGACKMHKNFDLGVEVAENLISAEP 410

Query: 443 FESNIYVSTALIDMYAKCGNIVEARELFDLMSH---KSEVTWNTM 484
                YV   L +MYA  G +     + ++M     K +V ++T+
Sbjct: 411 ENPGHYV--LLSNMYALAGRMDRVESVRNVMIQRGLKKQVGYSTI 453



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 101/365 (27%), Positives = 181/365 (49%), Gaps = 6/365 (1%)

Query: 131 HGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCF 190
           H H +V+G      +   L+ L      +   R++F  + + D+ L+NS+I         
Sbjct: 30  HAHLVVTGCHRSRALLTKLLTLSCAAGSIAYTRRLFRSVSDPDSFLFNSLIKASSNFGFS 89

Query: 191 QDSIWVFGDMVRNGGTWLDST-SVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLT 249
            D+++ +  M+ +    + ST +  +V+ A A++  LRLG  +       G+  + +V  
Sbjct: 90  LDAVFFYRRMLHS--RIVPSTYTFTSVIKACADLSLLRLGTIVHSHVFVSGYASNSFVQA 147

Query: 250 GLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERV 309
            LV+FY+K      A  +F ++ +  +I+ N+MISGY  NG    ++ +F ++  S    
Sbjct: 148 ALVTFYAKSCTPRVARKVFDEMPQRSIIAWNSMISGYEQNGLASEAVEVFNKMRESGGEP 207

Query: 310 NSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLF 369
           +S+T V ++      G L L   +H   + +GI  N  + T+L  ++SR  ++  AR +F
Sbjct: 208 DSATFVSVLSACSQLGSLDLGCWLHECIVGTGIRMNVVLATSLVNMFSRCGDVGRARAVF 267

Query: 370 DESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAIS 429
           D  +E ++ SW AMI+GY  +G   EA+ +F  M+A  V PN VT  ++LSACA  G I+
Sbjct: 268 DSMNEGNVVSWTAMISGYGMHGYGVEAMEVFHRMKACGVVPNRVTYVAVLSACAHAGLIN 327

Query: 430 LGKWVHELVKSR-NFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEV--TWNTMIS 486
            G+ V   +K        +     ++DM+ + G + EA +    +S +  V   W  M+ 
Sbjct: 328 EGRLVFASMKQEYGVVPGVEHHVCMVDMFGRGGLLNEAYQFVRGLSSEELVPAVWTAMLG 387

Query: 487 GYGLH 491
              +H
Sbjct: 388 ACKMH 392



 Score =  123 bits (308), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 78/269 (28%), Positives = 134/269 (49%), Gaps = 2/269 (0%)

Query: 326 HLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIA 385
           HL      H+  + +G   + ++LT L T+      +   R+LF   S+     +N++I 
Sbjct: 22  HLRRLQQAHAHLVVTGCHRSRALLTKLLTLSCAAGSIAYTRRLFRSVSDPDSFLFNSLIK 81

Query: 386 GYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFES 445
             +  G + +A+  ++ M  S++ P+  T +S++ ACA L  + LG  VH  V    + S
Sbjct: 82  ASSNFGFSLDAVFFYRRMLHSRIVPSTYTFTSVIKACADLSLLRLGTIVHSHVFVSGYAS 141

Query: 446 NIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEML 505
           N +V  AL+  YAK      AR++FD M  +S + WN+MISGY  +G   EA+++F++M 
Sbjct: 142 NSFVQAALVTFYAKSCTPRVARKVFDEMPQRSIIAWNSMISGYEQNGLASEAVEVFNKMR 201

Query: 506 HSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQL 565
            SG  P   TF+SVL ACS  G +  G  + + ++   G +        +V++  R G +
Sbjct: 202 ESGGEPDSATFVSVLSACSQLGSLDLGCWLHECIV-GTGIRMNVVLATSLVNMFSRCGDV 260

Query: 566 EKALEFIKGLAVEPGPAVWGALLGACMIH 594
            +A      +  E     W A++    +H
Sbjct: 261 GRARAVFDSMN-EGNVVSWTAMISGYGMH 288


>gi|449475140|ref|XP_004154387.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Cucumis sativus]
 gi|449522468|ref|XP_004168248.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Cucumis sativus]
          Length = 574

 Score =  450 bits (1157), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 234/571 (40%), Positives = 342/571 (59%), Gaps = 1/571 (0%)

Query: 214 AAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVR 273
           A++L +    + +  G ++     ++G   +  + T LV+ Y  C  +  A LLF  I +
Sbjct: 5   ASLLQSCVVRKAIEPGKQLHARICQVGISFNPLLATKLVNLYCICNSLTNAHLLFDRISK 64

Query: 274 PDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCI 333
            +L   N MI GY  NG  E ++ L+ Q+       +  T   ++        +     I
Sbjct: 65  RNLFLWNVMIRGYAWNGPYELAISLYYQMRDYGLVPDKFTFPFVLKACSALSAMEEGKKI 124

Query: 334 HSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLT 393
           H   ++SG+ S+  V  AL  +Y++   +E+AR++FD+  E+ +  WN+M+A Y+QNG  
Sbjct: 125 HKDVIRSGLESDVFVGAALIDMYAKCGCVESARQVFDKIDERDVVCWNSMLATYSQNGQP 184

Query: 394 EEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTAL 453
           +E+++L + M  + + P   T    ++A A  G +  GK +H       FESN  V TAL
Sbjct: 185 DESLALCRVMAFNGLKPTEGTFVISIAASADNGLLPQGKELHGYSWRHGFESNDKVKTAL 244

Query: 454 IDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSG 513
           +DMYAK G++  AR LF+L+  K  V+WN MI+GY +HGH  EAL LF EM    + P  
Sbjct: 245 MDMYAKSGSVNVARSLFELLEEKRVVSWNAMITGYAMHGHANEALDLFKEM-KGKVLPDH 303

Query: 514 VTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIK 573
           +TF+ VL ACSH GL+ EG   F+SMI D    P  +HY CM+D+LG  G+LE+A + I 
Sbjct: 304 ITFVGVLAACSHGGLLNEGKMHFRSMISDFNIWPTVQHYTCMIDLLGHCGRLEEAYKLIM 363

Query: 574 GLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQ 633
            + VEP   VWGALL +C IH +  +  +A EKL EL+P++ G +V+LSN+Y+    +  
Sbjct: 364 EMRVEPDAGVWGALLHSCKIHGNVEMGELALEKLVELEPDDGGNYVILSNMYAQAGKWDG 423

Query: 634 AATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGF 693
            A +R ++  + L K+  C+ IEVG   H F S D  HP+S AIYA L++    M+EAG+
Sbjct: 424 VARLRDLMMNKGLKKSIACSWIEVGNKVHAFLSEDTSHPKSEAIYAELKRTGKLMKEAGY 483

Query: 694 QTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKF 753
             +  +  HDVE++EK  M+  HSE+LAIAFGLI+T  GT++ IIKNLR+C DCH A KF
Sbjct: 484 APQVGSVFHDVEDDEKVDMVSCHSERLAIAFGLISTSAGTKLLIIKNLRICEDCHVAIKF 543

Query: 754 ISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           ISK+T R I +RD NR+HHFK GVCSCGD+W
Sbjct: 544 ISKITEREITIRDVNRYHHFKDGVCSCGDFW 574



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 142/451 (31%), Positives = 211/451 (46%), Gaps = 39/451 (8%)

Query: 27  QTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNE 86
           Q HA+I   G   +    TKL +      +   A  LF  I K +LFL+NV+IRG++ N 
Sbjct: 22  QLHARICQVGISFNPLLATKLVNLYCICNSLTNAHLLFDRISKRNLFLWNVMIRGYAWNG 81

Query: 87  MPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVG 146
             + +I  Y  +R +  L PD FT+ FVL A SA      G  +H   I SG  SD+FVG
Sbjct: 82  PYELAISLYYQMR-DYGLVPDKFTFPFVLKACSALSAMEEGKKIHKDVIRSGLESDVFVG 140

Query: 147 AALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGT 206
           AAL+D+Y K   V+SAR+VFDK+ E+D V WNSM++   +N    +S+ +   M  NG  
Sbjct: 141 AALIDMYAKCGCVESARQVFDKIDERDVVCWNSMLATYSQNGQPDESLALCRVMAFNGLK 200

Query: 207 WLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAEL 266
             + T V ++  A A+   L  G E+     + GF  +  V T L+  Y+K G V  A  
Sbjct: 201 PTEGTFVISI-AASADNGLLPQGKELHGYSWRHGFESNDKVKTALMDMYAKSGSVNVARS 259

Query: 267 LFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGH 326
           LF  +    ++S NAMI+GY  +G    +L LF+++       +  T VG+         
Sbjct: 260 LFELLEEKRVVSWNAMITGYAMHGHANEALDLFKEMKGKV-LPDHITFVGV--------- 309

Query: 327 LHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAG 386
             L  C H   L  G +   S+++                   D +   ++  +  MI  
Sbjct: 310 --LAACSHGGLLNEGKMHFRSMIS-------------------DFNIWPTVQHYTCMIDL 348

Query: 387 YTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHE-LVKSRNFES 445
               G  EEA  L  EM   +V P+     ++L +C   G + +G+   E LV+    + 
Sbjct: 349 LGHCGRLEEAYKLIMEM---RVEPDAGVWGALLHSCKIHGNVEMGELALEKLVELEPDDG 405

Query: 446 NIYVSTALIDMYAKCGNIVEARELFDLMSHK 476
             YV   L +MYA+ G       L DLM +K
Sbjct: 406 GNYV--ILSNMYAQAGKWDGVARLRDLMMNK 434



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 113/387 (29%), Positives = 188/387 (48%), Gaps = 7/387 (1%)

Query: 112 SFVLSAASACCDRSI---GVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDK 168
           S+  S   +C  R     G  LH      G   +  +   LV+LY   + + +A  +FD+
Sbjct: 2   SYYASLLQSCVVRKAIEPGKQLHARICQVGISFNPLLATKLVNLYCICNSLTNAHLLFDR 61

Query: 169 MPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRL 228
           + +++  LWN MI G   N  ++ +I ++  M R+ G   D  +   VL A + +  +  
Sbjct: 62  ISKRNLFLWNVMIRGYAWNGPYELAISLYYQM-RDYGLVPDKFTFPFVLKACSALSAMEE 120

Query: 229 GMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTC 288
           G +I    ++ G    V+V   L+  Y+KCG VE A  +F  I   D++  N+M++ Y+ 
Sbjct: 121 GKKIHKDVIRSGLESDVFVGAALIDMYAKCGCVESARQVFDKIDERDVVCWNSMLATYSQ 180

Query: 289 NGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSV 348
           NG+ + SL L R +  +  +    T V  I      G L     +H +  + G  SN  V
Sbjct: 181 NGQPDESLALCRVMAFNGLKPTEGTFVISIAASADNGLLPQGKELHGYSWRHGFESNDKV 240

Query: 349 LTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKV 408
            TAL  +Y++   +  AR LF+   EK + SWNAMI GY  +G   EA+ LF+EM+  KV
Sbjct: 241 KTALMDMYAKSGSVNVARSLFELLEEKRVVSWNAMITGYAMHGHANEALDLFKEMKG-KV 299

Query: 409 APNPVTVSSILSACAQLGAISLGKW-VHELVKSRNFESNIYVSTALIDMYAKCGNIVEAR 467
            P+ +T   +L+AC+  G ++ GK     ++   N    +   T +ID+   CG + EA 
Sbjct: 300 LPDHITFVGVLAACSHGGLLNEGKMHFRSMISDFNIWPTVQHYTCMIDLLGHCGRLEEAY 359

Query: 468 ELFDLMSHKSEV-TWNTMISGYGLHGH 493
           +L   M  + +   W  ++    +HG+
Sbjct: 360 KLIMEMRVEPDAGVWGALLHSCKIHGN 386


>gi|297738694|emb|CBI27939.3| unnamed protein product [Vitis vinifera]
          Length = 764

 Score =  449 bits (1156), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 253/759 (33%), Positives = 409/759 (53%), Gaps = 9/759 (1%)

Query: 31  QIIIHGFQNDLSTVTKLAHRLSDFKATCY----ARALFFSIPKPDLFLFNVIIRGFSNNE 86
           +II    +N +   + L   L +    C     AR +   +P  D+  +N  +   +N+ 
Sbjct: 10  KIIFRVIKNGICPDSHLWSSLVNVYVKCESLQCARQVLEEMPIQDVQQWNQKLSS-ANSP 68

Query: 87  MPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVG 146
            P        +L ++T +  + F ++ ++SAA++  D   G  +H      G+ SD+ + 
Sbjct: 69  YPLQEAVQLFYLMRHTRIRLNQFIFASLISAAASLGDNHYGESIHACVCKYGFESDILIS 128

Query: 147 AALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKN-CCFQDSIWVFGDMVRNGG 205
            A V +Y K   V++  + F  M  ++    N+++SG      C Q    +   +V   G
Sbjct: 129 NAFVTMYMKTQSVENGWQFFKAMMIENLASRNNLLSGFCDTETCDQGPRILIQLLVE--G 186

Query: 206 TWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAE 265
              +  +  ++L   A   +L  G  I    +K G +   ++   LV+ Y+KCG    A 
Sbjct: 187 FEPNMYTFISILKTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYAC 246

Query: 266 LLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFG 325
            +F +I   D++S  A+I+G+   G   S LR+F Q+LA     N  T + ++       
Sbjct: 247 KVFGEIPERDVVSWTALITGFVAEGYG-SGLRIFNQMLAEGFNPNMYTFISILRSCSSLS 305

Query: 326 HLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIA 385
            + L   +H+  +K+ +  N  V TAL  +Y++   +E A  +F+   ++ L +W  ++A
Sbjct: 306 DVDLGKQVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVA 365

Query: 386 GYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFES 445
           GY Q+G  E+A+  F +MQ   V PN  T++S LS C+++  +  G+ +H +        
Sbjct: 366 GYAQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQLHSMAIKAGQSG 425

Query: 446 NIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEML 505
           +++V++AL+DMYAKCG + +A  +FD +  +  V+WNT+I GY  HG G +AL+ F  ML
Sbjct: 426 DMFVASALVDMYAKCGCVEDAEVVFDGLVSRDTVSWNTIICGYSQHGQGGKALKAFEAML 485

Query: 506 HSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQL 565
             G  P  VTF+ VL ACSH GL+ EG + F S+   +G  P  EHYACMVDILGRAG+ 
Sbjct: 486 DEGTVPDEVTFIGVLSACSHMGLIEEGKKHFNSLSKIYGITPTIEHYACMVDILGRAGKF 545

Query: 566 EKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIY 625
            +   FI+ + +     +W  +LGAC +H +      A+ KLFEL+PE    ++LLSN++
Sbjct: 546 HEVESFIEEMKLTSNVLIWETVLGACKMHGNIEFGERAAMKLFELEPEIDSNYILLSNMF 605

Query: 626 SAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLN 685
           +A+  +     VR ++  R + K PGC+ +EV G  HVF S D  HP+   I+  L+ L+
Sbjct: 606 AAKGMWDDVTNVRALMSTRGVKKEPGCSWVEVNGQVHVFLSHDGSHPKIREIHLKLQDLH 665

Query: 686 GKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCL 745
            K+   G+   T   LH+V + EK+ ++  HSE+LA+AF L++T     IRI KNLR+C 
Sbjct: 666 QKLMSVGYTPNTDHVLHNVSDREKQELLFYHSERLALAFALLSTSTRKTIRIFKNLRICG 725

Query: 746 DCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           DCH   K IS++T + +VVRD N FHHFK G CSC ++W
Sbjct: 726 DCHDFMKSISEITNQELVVRDINCFHHFKNGSCSCQNFW 764



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 100/424 (23%), Positives = 187/424 (44%), Gaps = 39/424 (9%)

Query: 12  FLSLLKGAKTQSQLTQ---THAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIP 68
           F+S+LK   ++  L +    H Q+I  G   D      L +  +   +  YA  +F  IP
Sbjct: 194 FISILKTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIP 253

Query: 69  KPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGV 128
           + D+  +  +I GF           F   L +     P+ +T+  +L + S+  D  +G 
Sbjct: 254 ERDVVSWTALITGFVAEGYGSGLRIFNQMLAE--GFNPNMYTFISILRSCSSLSDVDLGK 311

Query: 129 LLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNC 188
            +H   + +    + FVG ALVD+Y K  +++ A  +F+++ ++D   W  +++G  ++ 
Sbjct: 312 QVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQDG 371

Query: 189 CFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVL 248
             + ++  F  M R  G   +  ++A+ L   + +  L  G ++  + +K G    ++V 
Sbjct: 372 QGEKAVKCFIQMQRE-GVKPNEFTLASSLSGCSRIATLDSGRQLHSMAIKAGQSGDMFVA 430

Query: 249 TGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAER 308
           + LV  Y+KCG VE AE++F  +V  D +S N +I GY+ +G+   +L+ F  +L     
Sbjct: 431 SALVDMYAKCGCVEDAEVVFDGLVSRDTVSWNTIICGYSQHGQGGKALKAFEAMLDEGTV 490

Query: 309 VNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKL 368
            +  T +G+           L+ C H   ++ G         +LS +Y     +E     
Sbjct: 491 PDEVTFIGV-----------LSACSHMGLIEEG----KKHFNSLSKIYGITPTIE----- 530

Query: 369 FDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAI 428
                      +  M+    + G   E  S  +EM   K+  N +   ++L AC   G I
Sbjct: 531 ----------HYACMVDILGRAGKFHEVESFIEEM---KLTSNVLIWETVLGACKMHGNI 577

Query: 429 SLGK 432
             G+
Sbjct: 578 EFGE 581


>gi|115483184|ref|NP_001065185.1| Os10g0540100 [Oryza sativa Japonica Group]
 gi|78708963|gb|ABB47938.1| PPR986-12, putative, expressed [Oryza sativa Japonica Group]
 gi|113639794|dbj|BAF27099.1| Os10g0540100 [Oryza sativa Japonica Group]
 gi|125575555|gb|EAZ16839.1| hypothetical protein OsJ_32311 [Oryza sativa Japonica Group]
 gi|215704329|dbj|BAG93763.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 681

 Score =  449 bits (1156), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 223/576 (38%), Positives = 348/576 (60%), Gaps = 1/576 (0%)

Query: 209 DSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLF 268
           DST+    L A A + +LR G  ++      G+ D V+V + L+  Y++ G +  A  +F
Sbjct: 107 DSTTFTLALSACARLGDLRGGESVRDRAFDAGYKDDVFVCSSLLHLYARWGAMGDAVKVF 166

Query: 269 RDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLH 328
             + R D ++ + M++G+   G+   +++++R++     + +   ++G+I       ++ 
Sbjct: 167 VRMPRRDRVTWSTMVAGFVSAGQPLDAIQMYRRMREDGVKGDEVVMIGVIQACTAARNVR 226

Query: 329 LTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYT 388
           +   +H   L+ G+  +    T+L  +Y++   ++ A ++F     ++  SW+AMI+G+ 
Sbjct: 227 MGASVHGHLLRHGMRMDVVTATSLVDMYAKNGLLDVACRVFGLMVHRNDVSWSAMISGFA 286

Query: 389 QNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIY 448
           QNG ++EA+ LF+ MQAS + P+   + S L AC+ +G + LG+ VH  +  R F+ N  
Sbjct: 287 QNGQSDEALRLFRNMQASGIQPDSGALVSALLACSNIGFLKLGRSVHGFI-VRRFDFNCI 345

Query: 449 VSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSG 508
           + TA IDMY+KCG++  A+ LF+++S +  + WN MI+  G HG G +AL LF EM  +G
Sbjct: 346 LGTAAIDMYSKCGSLASAQMLFNMISDRDLILWNAMIACCGAHGRGQDALTLFQEMNETG 405

Query: 509 IRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKA 568
           +RP   TF S+L A SH+GLV EG   F  M++     P  +HY C+VD+L R+G +E+A
Sbjct: 406 MRPDHATFASLLSALSHSGLVEEGKLWFGRMVNHFKITPAEKHYVCLVDLLARSGLVEEA 465

Query: 569 LEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAE 628
            + +  +  EP  A+W ALL  C+ +K   L    ++ + EL P++VG   L+SN+Y+A 
Sbjct: 466 SDLLTSMKAEPTVAIWVALLSGCLNNKKLELGESIADNILELQPDDVGVLALVSNLYAAT 525

Query: 629 RDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKM 688
           + + +   VR+++K     K PGC+ IE+ GT HVF   DQ HPQ   I + + KL+ +M
Sbjct: 526 KKWDKVRQVRKLMKDSGSKKMPGCSSIEIRGTRHVFVMEDQSHPQREEIVSKVAKLDLEM 585

Query: 689 REAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCH 748
           R+ G+   T    HD+EEE KE  +  HSE+LAIAFGL+ T PGT + IIKNLRVC DCH
Sbjct: 586 RKMGYIPRTEFVYHDLEEEVKEQQLSYHSERLAIAFGLLNTGPGTRLVIIKNLRVCGDCH 645

Query: 749 TATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
            A K+ISK+  R IVVRDA RFHHFK GVCSC DYW
Sbjct: 646 DAIKYISKIADREIVVRDAKRFHHFKDGVCSCRDYW 681



 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 139/470 (29%), Positives = 240/470 (51%), Gaps = 22/470 (4%)

Query: 88  PKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGA 147
           P S++  +  L    A  PD+ T++  LSA +   D   G  +   A  +GY  D+FV +
Sbjct: 90  PASALRVFRAL--PPAARPDSTTFTLALSACARLGDLRGGESVRDRAFDAGYKDDVFVCS 147

Query: 148 ALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTW 207
           +L+ LY ++  +  A KVF +MP +D V W++M++G +      D+I ++  M R  G  
Sbjct: 148 SLLHLYARWGAMGDAVKVFVRMPRRDRVTWSTMVAGFVSAGQPLDAIQMYRRM-REDGVK 206

Query: 208 LDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELL 267
            D   +  V+ A    + +R+G  +    L+ G    V   T LV  Y+K G ++ A  +
Sbjct: 207 GDEVVMIGVIQACTAARNVRMGASVHGHLLRHGMRMDVVTATSLVDMYAKNGLLDVACRV 266

Query: 268 FRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHL 327
           F  +V  + +S +AMISG+  NG+++ +LRLFR + AS  + +S  +V  +      G L
Sbjct: 267 FGLMVHRNDVSWSAMISGFAQNGQSDEALRLFRNMQASGIQPDSGALVSALLACSNIGFL 326

Query: 328 HLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGY 387
            L   +H F ++     N  + TA   +YS+   + +A+ LF+  S++ L  WNAMIA  
Sbjct: 327 KLGRSVHGFIVRR-FDFNCILGTAAIDMYSKCGSLASAQMLFNMISDRDLILWNAMIACC 385

Query: 388 TQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGK-WVHELVKSRNFESN 446
             +G  ++A++LFQEM  + + P+  T +S+LSA +  G +  GK W   +V        
Sbjct: 386 GAHGRGQDALTLFQEMNETGMRPDHATFASLLSALSHSGLVEEGKLWFGRMVNHFKITPA 445

Query: 447 IYVSTALIDMYAKCGNIVEARELFDLMSHKSEVT---WNTMISGYGLHGHGLEALQLFSE 503
                 L+D+ A+ G + EA +L  L S K+E T   W  ++SG  L+   LE  +  ++
Sbjct: 446 EKHYVCLVDLLARSGLVEEASDL--LTSMKAEPTVAIWVALLSGC-LNNKKLELGESIAD 502

Query: 504 MLHSGIRPSGVTFLSV---LYACSHAGLVREGDEIFQ--SMIHDHGFKPL 548
            +   ++P  V  L++   LYA +     ++ D++ Q   ++ D G K +
Sbjct: 503 NILE-LQPDDVGVLALVSNLYAAT-----KKWDKVRQVRKLMKDSGSKKM 546


>gi|449433141|ref|XP_004134356.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Cucumis sativus]
          Length = 654

 Score =  449 bits (1155), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 222/627 (35%), Positives = 376/627 (59%), Gaps = 1/627 (0%)

Query: 159 VKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLP 218
           V  A  VF    E D + WNSM+   + +   + ++  + +M+       D  +  ++L 
Sbjct: 28  VGYAYSVFAHTRELDVLTWNSMLRAFVNSNMPRRALQSYTEMLERSRNVPDRFTFPSLLK 87

Query: 219 AVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLIS 278
             A + E ++G  +    +K   H  +Y+ T L++ Y+ CG+++ A  LF  +   + + 
Sbjct: 88  GCALLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVV 147

Query: 279 CNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCL 338
             +MISGY  N     +L L++++       +  T+  L+        L +   +HS   
Sbjct: 148 WTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIR 207

Query: 339 KSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAIS 398
           +  +   + + +AL  +Y++  +++ AR++FD+ S+K + +W+A+I GY +N  + EA+ 
Sbjct: 208 EMDMKICAVLGSALVNMYAKCGDLKTARQVFDKLSDKDVYAWSALIFGYVKNNRSTEALQ 267

Query: 399 LFQEMQA-SKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMY 457
           LF+E+   S + PN VT+ +++SACAQLG +  G+WVH+ +       ++ ++ +LIDM+
Sbjct: 268 LFREVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDMF 327

Query: 458 AKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFL 517
           +KCG+I  A+ +FD MS+K  ++WN+M++G+ LHG G EAL  F  M  + ++P  +TF+
Sbjct: 328 SKCGDIDAAKRIFDSMSYKDLISWNSMVNGFALHGLGREALAQFRLMQTTDLQPDEITFI 387

Query: 518 SVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAV 577
            VL ACSHAGLV+EG ++F  +   +G +  +EHY CMVD+L RAG L +A EFI+ + +
Sbjct: 388 GVLTACSHAGLVQEGKKLFYEIEALYGVRLKSEHYGCMVDLLCRAGLLAEAREFIRVMPL 447

Query: 578 EPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATV 637
           +P  A+WG++LGAC ++ +  L   A+  L +L+P N G ++LLSNIY+  + + +   V
Sbjct: 448 QPDGAIWGSMLGACRVYNNLELGEEAARFLLKLEPTNDGVYILLSNIYAKRKMWNEVKKV 507

Query: 638 RQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTET 697
           R+++ ++ + K PGC+ + +    H F +GD  HP+   I  ML ++  K++ AG+  +T
Sbjct: 508 RELMNEKGIQKTPGCSSVVIDNIAHSFLAGDCSHPEIAEISIMLRQVREKLKLAGYVADT 567

Query: 698 VTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKV 757
              L ++++ +KE  +  HSEKLA+ +GL+ +E G  I I+KNLRVC DCHT  K +SK+
Sbjct: 568 SEVLLNIDDNKKEESVSQHSEKLALCYGLLKSEIGGRIVILKNLRVCSDCHTLIKLVSKI 627

Query: 758 TGRVIVVRDANRFHHFKGGVCSCGDYW 784
             R I +RD NRFHHFK G CSC DYW
Sbjct: 628 YQRQITLRDRNRFHHFKDGSCSCRDYW 654



 Score =  220 bits (560), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 129/461 (27%), Positives = 253/461 (54%), Gaps = 10/461 (2%)

Query: 32  IIIHGFQNDLSTVTKL-AHRLS-DFKATCYARALFFSIPKPDLFLFNVIIRGFSNNEMPK 89
           +++ GF +   ++ KL AH LS       YA ++F    + D+  +N ++R F N+ MP+
Sbjct: 1   MVVTGFIHHKPSLNKLIAHVLSMGSLGVGYAYSVFAHTRELDVLTWNSMLRAFVNSNMPR 60

Query: 90  SSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAAL 149
            ++  YT + + +   PD FT+  +L   +   +  +G +LHG  +     SDL++   L
Sbjct: 61  RALQSYTEMLERSRNVPDRFTFPSLLKGCALLLEFKVGKVLHGQVVKYMLHSDLYIETTL 120

Query: 150 VDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLD 209
           +++Y     +KSAR +F++M  ++ V+W SMISG MKN C  +++ ++  M  +G +  D
Sbjct: 121 LNMYAACGDLKSARFLFERMGHRNKVVWTSMISGYMKNHCPNEALLLYKKMEEDGFS-PD 179

Query: 210 STSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFR 269
             ++A ++ A AE+++L +GM++     ++       + + LV+ Y+KCG+++ A  +F 
Sbjct: 180 EVTMATLVSACAELKDLGVGMKLHSHIREMDMKICAVLGSALVNMYAKCGDLKTARQVFD 239

Query: 270 DIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAE-RVNSSTIVGLIPVFYPFGHLH 328
            +   D+ + +A+I GY  N ++  +L+LFR++   +  R N  TI+ +I      G L 
Sbjct: 240 KLSDKDVYAWSALIFGYVKNNRSTEALQLFREVAGGSNMRPNEVTILAVISACAQLGDLE 299

Query: 329 LTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYT 388
               +H +  ++    + S+  +L  ++S+  +++AA+++FD  S K L SWN+M+ G+ 
Sbjct: 300 TGRWVHDYITRTQKGHSVSLNNSLIDMFSKCGDIDAAKRIFDSMSYKDLISWNSMVNGFA 359

Query: 389 QNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGK---WVHELVKSRNFES 445
            +GL  EA++ F+ MQ + + P+ +T   +L+AC+  G +  GK   +  E +     +S
Sbjct: 360 LHGLGREALAQFRLMQTTDLQPDEITFIGVLTACSHAGLVQEGKKLFYEIEALYGVRLKS 419

Query: 446 NIYVSTALIDMYAKCGNIVEARELFDLMSHKSE-VTWNTMI 485
             Y    ++D+  + G + EARE   +M  + +   W +M+
Sbjct: 420 EHY--GCMVDLLCRAGLLAEAREFIRVMPLQPDGAIWGSML 458



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 117/479 (24%), Positives = 217/479 (45%), Gaps = 45/479 (9%)

Query: 7   QSRNL-----FLSLLKGAKTQSQLTQ---THAQIIIHGFQNDLSTVTKLAHRLSDFKATC 58
           +SRN+     F SLLKG     +       H Q++ +   +DL   T L +  +      
Sbjct: 72  RSRNVPDRFTFPSLLKGCALLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLK 131

Query: 59  YARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAA 118
            AR LF  +   +  ++  +I G+  N  P  ++  Y  + ++   +PD  T + ++SA 
Sbjct: 132 SARFLFERMGHRNKVVWTSMISGYMKNHCPNEALLLYKKMEED-GFSPDEVTMATLVSAC 190

Query: 119 SACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWN 178
           +   D  +G+ LH H           +G+ALV++Y K   +K+AR+VFDK+ +KD   W+
Sbjct: 191 AELKDLGVGMKLHSHIREMDMKICAVLGSALVNMYAKCGDLKTARQVFDKLSDKDVYAWS 250

Query: 179 SMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLK 238
           ++I G +KN    +++ +F ++        +  ++ AV+ A A++ +L  G  +     +
Sbjct: 251 ALIFGYVKNNRSTEALQLFREVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITR 310

Query: 239 LGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRL 298
                 V +   L+  +SKCG+++ A+ +F  +   DLIS N+M++G+  +G    +L  
Sbjct: 311 TQKGHSVSLNNSLIDMFSKCGDIDAAKRIFDSMSYKDLISWNSMVNGFALHGLGREALAQ 370

Query: 299 FRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSR 358
           FR +  +  + +  T +G+           LT C H     +G+V     L         
Sbjct: 371 FRLMQTTDLQPDEITFIGV-----------LTACSH-----AGLVQEGKKL--------- 405

Query: 359 LNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSI 418
             E+EA   +  +S       +  M+    + GL  EA    + M    + P+     S+
Sbjct: 406 FYEIEALYGVRLKSEH-----YGCMVDLLCRAGLLAEAREFIRVM---PLQPDGAIWGSM 457

Query: 419 LSACAQLGAISLGKWVHE-LVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHK 476
           L AC     + LG+     L+K       +Y+   L ++YAK     E +++ +LM+ K
Sbjct: 458 LGACRVYNNLELGEEAARFLLKLEPTNDGVYI--LLSNIYAKRKMWNEVKKVRELMNEK 514


>gi|297739711|emb|CBI29893.3| unnamed protein product [Vitis vinifera]
          Length = 784

 Score =  449 bits (1155), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 222/561 (39%), Positives = 347/561 (61%), Gaps = 2/561 (0%)

Query: 226 LRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISG 285
           +R G  +    +K  +   VY+ T L+  Y+KC  +  A  +  ++   +++S  AMISG
Sbjct: 26  IREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMPERNVVSWTAMISG 85

Query: 286 YTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSN 345
           Y+  G    +L LF ++L S    N  T   ++          L   IHS  +K+   S+
Sbjct: 86  YSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQIHSLVIKTSFESH 145

Query: 346 SSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQA 405
             V ++L  +Y++  ++  AR++FD   E+ + S  A+I+GY Q GL EEA+ LF+ +Q 
Sbjct: 146 IFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLGLDEEALDLFRRLQR 205

Query: 406 SKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVE 465
             +  N VT +S+L+A + L A+  G+ VH  V        + +  +LIDMY+KCG++  
Sbjct: 206 EGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSLIDMYSKCGSLTY 265

Query: 466 ARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSG-IRPSGVTFLSVLYACS 524
           +R +FD M  ++ ++WN M+ GY  HG G EA++LF  M     ++P  VTFL+VL  CS
Sbjct: 266 SRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVKPDSVTFLAVLSGCS 325

Query: 525 HAGLVREGDEIFQSMIHDH-GFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAV 583
           H G+   G EIF  M++   GF+P  EHY C+VD+ GRAG++E+A EFIK +  EP  A+
Sbjct: 326 HGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEAFEFIKKMPFEPTAAI 385

Query: 584 WGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKK 643
           WG+LLGAC +H++ ++    + +L E++ EN G +V+LSN+Y++   +    TVR+++K+
Sbjct: 386 WGSLLGACRVHQNVHIGEFVARRLLEIESENAGNYVILSNLYASAGRWDDVRTVRELMKE 445

Query: 644 RKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHD 703
           + + K PG + IE+  T H F + D+ HP+   ++A + +L+ K++EAG+  E    L+D
Sbjct: 446 KAVIKEPGRSWIELDQTLHTFHASDRSHPRKEEVFAKVRELSIKIKEAGYVPELSCVLYD 505

Query: 704 VEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIV 763
           V++E+KE +++ HSEKLA+AFGLI T  GT +RIIKNLR+C+DCH   KF+S+V GR + 
Sbjct: 506 VDDEQKEKILQGHSEKLALAFGLICTPGGTPVRIIKNLRICVDCHNFAKFLSRVYGREVS 565

Query: 764 VRDANRFHHFKGGVCSCGDYW 784
           +RD NRFHH  GG CSCGDYW
Sbjct: 566 LRDKNRFHHIVGGTCSCGDYW 586



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 109/369 (29%), Positives = 195/369 (52%), Gaps = 5/369 (1%)

Query: 127 GVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMK 186
           G  +H H I + Y   +++   L+ LY K   +  AR+V D+MPE++ V W +MISG  +
Sbjct: 29  GQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMPERNVVSWTAMISGYSQ 88

Query: 187 NCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVY 246
                +++ +F +M+ +G T  +  + A VL +       +LG +I  L +K  F  H++
Sbjct: 89  RGYASEALHLFVEMLMSG-TAPNEFTFATVLTSCTSSSGFQLGRQIHSLVIKTSFESHIF 147

Query: 247 VLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASA 306
           V + L+  Y+K G++  A  +F  +   D++SC A+ISGY   G  E +L LFR+L    
Sbjct: 148 VGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLGLDEEALDLFRRLQREG 207

Query: 307 ERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAAR 366
            R N  T   ++        L     +HS  L++ +     +  +L  +YS+   +  +R
Sbjct: 208 MRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSLIDMYSKCGSLTYSR 267

Query: 367 KLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEM-QASKVAPNPVTVSSILSACAQL 425
           ++FD   E+++ SWNAM+ GY+++GL  EA+ LF+ M + +KV P+ VT  ++LS C+  
Sbjct: 268 RIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVKPDSVTFLAVLSGCSHG 327

Query: 426 GAISLG-KWVHELVKSRN-FESNIYVSTALIDMYAKCGNIVEARELFDLMSHK-SEVTWN 482
           G    G +  +E+V  ++ FE  I     ++D++ + G + EA E    M  + +   W 
Sbjct: 328 GMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEAFEFIKKMPFEPTAAIWG 387

Query: 483 TMISGYGLH 491
           +++    +H
Sbjct: 388 SLLGACRVH 396



 Score =  119 bits (297), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 105/453 (23%), Positives = 206/453 (45%), Gaps = 38/453 (8%)

Query: 27  QTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNE 86
           + HA +I   ++  +   T+L    +  +    AR +   +P+ ++  +  +I G+S   
Sbjct: 31  RVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMPERNVVSWTAMISGYSQRG 90

Query: 87  MPKSSI-CFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFV 145
               ++  F   L   TA  P+ FT++ VL++ ++     +G  +H   I + + S +FV
Sbjct: 91  YASEALHLFVEMLMSGTA--PNEFTFATVLTSCTSSSGFQLGRQIHSLVIKTSFESHIFV 148

Query: 146 GAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGG 205
           G++L+D+Y K   +  AR+VFD +PE+D V   ++ISG  +    ++++ +F  + R  G
Sbjct: 149 GSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLGLDEEALDLFRRLQRE-G 207

Query: 206 TWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAE 265
              +  + A+VL A++ +  L  G ++    L+     +V +   L+  YSKCG +  + 
Sbjct: 208 MRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSLIDMYSKCGSLTYSR 267

Query: 266 LLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFG 325
            +F  +    +IS NAM+ GY+ +G    ++ LF+ L+    +V   ++  L        
Sbjct: 268 RIFDSMPERTVISWNAMLVGYSKHGLGREAVELFK-LMKEENKVKPDSVTFLAV------ 320

Query: 326 HLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIA 385
              L+ C H      G          L   Y  +N+ +          E  +  +  ++ 
Sbjct: 321 ---LSGCSHGGMEDRG----------LEIFYEMVNQKDGF--------EPEIEHYGCVVD 359

Query: 386 GYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWV-HELVKSRNFE 444
            + + G  EEA    ++M      P      S+L AC     + +G++V   L++  +  
Sbjct: 360 LFGRAGRVEEAFEFIKKM---PFEPTAAIWGSLLGACRVHQNVHIGEFVARRLLEIESEN 416

Query: 445 SNIYVSTALIDMYAKCGNIVEARELFDLMSHKS 477
           +  YV   L ++YA  G   + R + +LM  K+
Sbjct: 417 AGNYV--ILSNLYASAGRWDDVRTVRELMKEKA 447


>gi|356568841|ref|XP_003552616.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Glycine max]
          Length = 658

 Score =  449 bits (1155), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 234/572 (40%), Positives = 347/572 (60%), Gaps = 6/572 (1%)

Query: 219 AVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLIS 278
           + A+   L  G+++    +  GF    ++ T L++ Y + G ++RA  +F +     +  
Sbjct: 87  SCAQQNSLSDGLDVHRRLVSSGFDQDPFLATKLINMYYELGSIDRARKVFDETRERTIYV 146

Query: 279 CNAMISGYTCNGKTESSLRLFRQL----LASAERVNSSTIVGLIPVFYPFGHLHLTNCIH 334
            NA+       G  +  L L+ Q+    + S     +  +   +        L     IH
Sbjct: 147 WNALFRALAMVGCGKELLDLYVQMNWIGIPSDRFTYTFVLKACVVSELSVSPLQKGKEIH 206

Query: 335 SFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTE 394
           +  L+ G  +N  V+T L  VY++   +  A  +F     K+  SW+AMIA + +N +  
Sbjct: 207 AHILRHGYEANIHVMTTLLDVYAKFGSVSYANSVFCAMPTKNFVSWSAMIACFAKNEMPM 266

Query: 395 EAISLFQEM--QASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTA 452
           +A+ LFQ M  +A    PN VT+ ++L ACA L A+  GK +H  +  R  +S + V  A
Sbjct: 267 KALELFQLMMLEAHDSVPNSVTMVNVLQACAGLAALEQGKLIHGYILRRGLDSILPVLNA 326

Query: 453 LIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPS 512
           LI MY +CG I+  + +FD M ++  V+WN++IS YG+HG G +A+Q+F  M+H G  PS
Sbjct: 327 LITMYGRCGEILMGQRVFDNMKNRDVVSWNSLISIYGMHGFGKKAIQIFENMIHQGSSPS 386

Query: 513 GVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFI 572
            ++F++VL ACSHAGLV EG  +F+SM+  +   P  EHYACMVD+LGRA +L++A++ I
Sbjct: 387 YISFITVLGACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLI 446

Query: 573 KGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYL 632
           + +  EPGP VWG+LLG+C IH +  LA  AS  LFEL+P N G +VLL++IY+  + + 
Sbjct: 447 EDMHFEPGPTVWGSLLGSCRIHCNVELAERASTLLFELEPRNAGNYVLLADIYAEAKMWS 506

Query: 633 QAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAG 692
           +A +V ++++ R L K PGC+ IEV    + F S D+ +PQ   I+A+L KL+ +M+  G
Sbjct: 507 EAKSVMKLLEARGLQKLPGCSWIEVKRKVYSFVSVDEHNPQIEEIHALLVKLSNEMKAQG 566

Query: 693 FQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATK 752
           +  +T   L+D++EEEKE ++  HSEKLA+AFGLI T  G  IRI KNLR+C DCH  TK
Sbjct: 567 YVPQTNVVLYDLDEEEKERIVLGHSEKLAVAFGLINTVKGETIRIRKNLRLCEDCHAVTK 626

Query: 753 FISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           FISK   R I+VRD NRFHHFK GVCSCGDYW
Sbjct: 627 FISKFANREILVRDVNRFHHFKDGVCSCGDYW 658



 Score =  149 bits (375), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 108/425 (25%), Positives = 206/425 (48%), Gaps = 22/425 (5%)

Query: 84  NNEMPKSSICFYTHLRKNTAL-----TPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSG 138
           NN     S+C   +L++   L      P   T+  ++ + +     S G+ +H   + SG
Sbjct: 49  NNNQLIQSLCKGGNLKQAIHLLCCEPNPTQRTFEHLICSCAQQNSLSDGLDVHRRLVSSG 108

Query: 139 YGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFG 198
           +  D F+   L+++Y++   +  ARKVFD+  E+   +WN++   L    C ++ + ++ 
Sbjct: 109 FDQDPFLATKLINMYYELGSIDRARKVFDETRERTIYVWNALFRALAMVGCGKELLDLYV 168

Query: 199 DMVRNGGTWL----DSTSVAAVLPA--VAE--VQELRLGMEIQCLGLKLGFHDHVYVLTG 250
            M      W+    D  +   VL A  V+E  V  L+ G EI    L+ G+  +++V+T 
Sbjct: 169 QM-----NWIGIPSDRFTYTFVLKACVVSELSVSPLQKGKEIHAHILRHGYEANIHVMTT 223

Query: 251 LVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERV- 309
           L+  Y+K G V  A  +F  +   + +S +AMI+ +  N     +L LF+ ++  A    
Sbjct: 224 LLDVYAKFGSVSYANSVFCAMPTKNFVSWSAMIACFAKNEMPMKALELFQLMMLEAHDSV 283

Query: 310 -NSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKL 368
            NS T+V ++        L     IH + L+ G+ S   VL AL T+Y R  E+   +++
Sbjct: 284 PNSVTMVNVLQACAGLAALEQGKLIHGYILRRGLDSILPVLNALITMYGRCGEILMGQRV 343

Query: 369 FDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAI 428
           FD    + + SWN++I+ Y  +G  ++AI +F+ M     +P+ ++  ++L AC+  G +
Sbjct: 344 FDNMKNRDVVSWNSLISIYGMHGFGKKAIQIFENMIHQGSSPSYISFITVLGACSHAGLV 403

Query: 429 SLGKWVHELVKSR-NFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVT-WNTMIS 486
             GK + E + S+      +     ++D+  +   + EA +L + M  +   T W +++ 
Sbjct: 404 EEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMHFEPGPTVWGSLLG 463

Query: 487 GYGLH 491
              +H
Sbjct: 464 SCRIH 468



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 114/484 (23%), Positives = 208/484 (42%), Gaps = 52/484 (10%)

Query: 5   TPQSRNLFLSLLKGAKTQSQLTQ---THAQIIIHGFQNDLSTVTKLAHRLSDFKATCYAR 61
            P  R  F  L+     Q+ L+     H +++  GF  D    TKL +   +  +   AR
Sbjct: 75  NPTQRT-FEHLICSCAQQNSLSDGLDVHRRLVSSGFDQDPFLATKLINMYYELGSIDRAR 133

Query: 62  ALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASAC 121
            +F    +  ++++N + R  +     K  +  Y  +     +  D FTY+FVL A    
Sbjct: 134 KVFDETRERTIYVWNALFRALAMVGCGKELLDLYVQMNW-IGIPSDRFTYTFVLKAC-VV 191

Query: 122 CDRSIGVL-----LHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVL 176
            + S+  L     +H H +  GY +++ V   L+D+Y KF  V  A  VF  MP K+ V 
Sbjct: 192 SELSVSPLQKGKEIHAHILRHGYEANIHVMTTLLDVYAKFGSVSYANSVFCAMPTKNFVS 251

Query: 177 WNSMISGLMKNCCFQDSIWVFGDMVRNG-GTWLDSTSVAAVLPAVAEVQELRLGMEIQCL 235
           W++MI+   KN     ++ +F  M+     +  +S ++  VL A A +  L  G  I   
Sbjct: 252 WSAMIACFAKNEMPMKALELFQLMMLEAHDSVPNSVTMVNVLQACAGLAALEQGKLIHGY 311

Query: 236 GLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESS 295
            L+ G    + VL  L++ Y +CGE+   + +F ++   D++S N++IS Y  +G  + +
Sbjct: 312 ILRRGLDSILPVLNALITMYGRCGEILMGQRVFDNMKNRDVVSWNSLISIYGMHGFGKKA 371

Query: 296 LRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTV 355
           +++F  ++      +S + +  I V        L  C H+  ++ G +   S+L+     
Sbjct: 372 IQIFENMIHQG---SSPSYISFITV--------LGACSHAGLVEEGKILFESMLSKYRI- 419

Query: 356 YSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTV 415
                                +  +  M+    +    +EAI L ++M      P P   
Sbjct: 420 ------------------HPGMEHYACMVDLLGRANRLDEAIKLIEDMH---FEPGPTVW 458

Query: 416 SSILSACAQLGAISLGKWVHEL---VKSRNFESNIYVSTALIDMYAKCGNIVEARELFDL 472
            S+L +C     + L +    L   ++ RN  +  YV   L D+YA+     EA+ +  L
Sbjct: 459 GSLLGSCRIHCNVELAERASTLLFELEPRN--AGNYV--LLADIYAEAKMWSEAKSVMKL 514

Query: 473 MSHK 476
           +  +
Sbjct: 515 LEAR 518



 Score = 76.6 bits (187), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 55/194 (28%), Positives = 94/194 (48%), Gaps = 13/194 (6%)

Query: 381 NAMIAGYTQNGLTEEAISLFQEMQASKVAPNPV--TVSSILSACAQLGAISLGKWVHELV 438
           N +I    + G  ++AI L          PNP   T   ++ +CAQ  ++S G  VH  +
Sbjct: 51  NQLIQSLCKGGNLKQAIHLLC------CEPNPTQRTFEHLICSCAQQNSLSDGLDVHRRL 104

Query: 439 KSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEAL 498
            S  F+ + +++T LI+MY + G+I  AR++FD    ++   WN +     + G G E L
Sbjct: 105 VSSGFDQDPFLATKLINMYYELGSIDRARKVFDETRERTIYVWNALFRALAMVGCGKELL 164

Query: 499 QLFSEMLHSGIRPSGVTFLSVLYACSHAGL----VREGDEIFQSMIHDHGFKPLAEHYAC 554
            L+ +M   GI     T+  VL AC  + L    +++G EI  + I  HG++        
Sbjct: 165 DLYVQMNWIGIPSDRFTYTFVLKACVVSELSVSPLQKGKEI-HAHILRHGYEANIHVMTT 223

Query: 555 MVDILGRAGQLEKA 568
           ++D+  + G +  A
Sbjct: 224 LLDVYAKFGSVSYA 237


>gi|302816284|ref|XP_002989821.1| hypothetical protein SELMODRAFT_130453 [Selaginella moellendorffii]
 gi|300142387|gb|EFJ09088.1| hypothetical protein SELMODRAFT_130453 [Selaginella moellendorffii]
          Length = 941

 Score =  449 bits (1155), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 258/764 (33%), Positives = 406/764 (53%), Gaps = 8/764 (1%)

Query: 27  QTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNE 86
           + H +II  G + D      L H      +    +++F  + +  + L+  +I G S N 
Sbjct: 180 KIHHRIINEGLEPDGILGNALVHMYGSCGSFDDMKSVFSRMGQSSVLLWTTMIAGCSQNG 239

Query: 87  MPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVG 146
             +  +  +  +     +  +  TY  ++           G ++    + S + S   + 
Sbjct: 240 QYEEGLLVFRKMDLE-GVKANEVTYMSMVEVCRNLDAVKEGEMIDARILESPFCSSTLLA 298

Query: 147 AALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGT 206
            +L+ LY +   +  A+ + + M ++D V WN+M++   +N    ++I +   M   G  
Sbjct: 299 TSLISLYGQCGILDRAKGLLEHMYQRDVVAWNAMVTACAQNGDNWEAIHLLRRMDMEG-F 357

Query: 207 WLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGF-HDHVYVLTGLVSFYSKCGEVERAE 265
             +  +  +VL A A ++ L  G EI    L  G     V V   +++ Y KCG+ E A 
Sbjct: 358 GANKVTYLSVLEACANLEALSQGREIHARVLLCGLLQREVAVGNSVITMYGKCGQTEAAM 417

Query: 266 LLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFG 325
            +F  + R D +S NA+I+    N K + +L LF  +     R N  T++ L+       
Sbjct: 418 SVFEAMPRKDDVSWNAVINASVGNSKFQDALELFHGMELEGLRSNEFTLLSLLEACGGLE 477

Query: 326 HLHLTNCIHSFCLKSGIVSNSSVL-TALSTVYSRLNEMEAARKLFDESSEKSLASWNAMI 384
            L L   IH+     G   NS+ +  ++  +Y+R   +  A+K FD   EK L +W+ ++
Sbjct: 478 DLKLARQIHARAAAGGFGGNSTAVGNSVVNMYARCGSLLDAKKAFDSLEEKGLVAWSIIL 537

Query: 385 AGYTQ--NGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRN 442
           A Y Q  +G    A   FQEM+A  + P  VT  S L ACA +  +  G+ +H    +  
Sbjct: 538 AAYAQSKDGPGRRAFKFFQEMEAEGIKPGEVTFVSALDACAAMATLEHGRSMHRRAAASG 597

Query: 443 F-ESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLF 501
           F E+++ +   +I+MY KCG+  +A+ +FD M  K  ++WN++I  Y  +GH LEAL   
Sbjct: 598 FVETSLVLGNTIINMYGKCGSPSDAKLVFDQMPEKCLISWNSLIVAYAHNGHALEALSSL 657

Query: 502 SEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGR 561
            EML  G  P   T +S+LY  SHAGL+  G E F+S I DHG +P +    C+VD+L R
Sbjct: 658 QEMLLQGFDPDSGTSVSILYGLSHAGLLERGVEHFRSSIQDHGLEPSSGQLKCLVDLLAR 717

Query: 562 AGQLEKALEFI-KGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVL 620
            G L+ A E I    A +     W  LL AC  + D       +E++FEL+P++ G  V+
Sbjct: 718 KGFLDAAEELILASPACQADTIAWMTLLAACKSYGDPQRGIRCAERVFELEPQHSGSFVV 777

Query: 621 LSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAM 680
           L+N+Y++   +  A+ +R+++++  + K PGC+ IE+ G+ H F SG+  HP+   I   
Sbjct: 778 LANLYASVGRWSDASRIRKMMERMSVKKEPGCSWIELSGSVHEFISGESKHPKIREICED 837

Query: 681 LEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKN 740
           LEKL  +MREAG+  +T   +HDVEE +KE ++  HSE+LAI FGL++T PG  IR++KN
Sbjct: 838 LEKLTLRMREAGYVPDTTNVVHDVEEGDKEEILSRHSERLAIVFGLMSTRPGETIRVVKN 897

Query: 741 LRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           LRVC DCH ATK IS V GR IVVRD++RFHHFK G CSCGD+W
Sbjct: 898 LRVCSDCHAATKIISSVVGREIVVRDSSRFHHFKHGQCSCGDFW 941



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 140/557 (25%), Positives = 254/557 (45%), Gaps = 5/557 (0%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           A  +F  I   ++F + +++  +S N   + ++  +T ++      PD   +   L A +
Sbjct: 11  ALMVFDGISAKNVFSWTMMMAAYSQNGHYREALELFTRMQWE-GTRPDKVVFVIALDACA 69

Query: 120 ACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNS 179
           A  +   G  +H   + SG  S++ +  +LV++Y K   V  A KVFD M  +D V W +
Sbjct: 70  ASGELDHGRQIHSSVVGSGLTSNIIISNSLVNMYGKCQDVPCAEKVFDGMLLRDVVSWTA 129

Query: 180 MISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKL 239
           M++   +N C+  ++     M    G   +  +   ++   A+++ L LG +I    +  
Sbjct: 130 MLAVYAQNGCWSQALECLSRMDAE-GVKPNQVTFVTIVDVCAKLRLLDLGRKIHHRIINE 188

Query: 240 GFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLF 299
           G      +   LV  Y  CG  +  + +F  + +  ++    MI+G + NG+ E  L +F
Sbjct: 189 GLEPDGILGNALVHMYGSCGSFDDMKSVFSRMGQSSVLLWTTMIAGCSQNGQYEEGLLVF 248

Query: 300 RQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRL 359
           R++     + N  T + ++ V      +     I +  L+S   S++ + T+L ++Y + 
Sbjct: 249 RKMDLEGVKANEVTYMSMVEVCRNLDAVKEGEMIDARILESPFCSSTLLATSLISLYGQC 308

Query: 360 NEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSIL 419
             ++ A+ L +   ++ + +WNAM+    QNG   EAI L + M       N VT  S+L
Sbjct: 309 GILDRAKGLLEHMYQRDVVAWNAMVTACAQNGDNWEAIHLLRRMDMEGFGANKVTYLSVL 368

Query: 420 SACAQLGAISLGKWVH-ELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSE 478
            ACA L A+S G+ +H  ++     +  + V  ++I MY KCG    A  +F+ M  K +
Sbjct: 369 EACANLEALSQGREIHARVLLCGLLQREVAVGNSVITMYGKCGQTEAAMSVFEAMPRKDD 428

Query: 479 VTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQS 538
           V+WN +I+    +    +AL+LF  M   G+R +  T LS+L AC     ++   +I   
Sbjct: 429 VSWNAVINASVGNSKFQDALELFHGMELEGLRSNEFTLLSLLEACGGLEDLKLARQIHAR 488

Query: 539 MIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTN 598
                           +V++  R G L  A +    L  E G   W  +L A    KD  
Sbjct: 489 AAAGGFGGNSTAVGNSVVNMYARCGSLLDAKKAFDSLE-EKGLVAWSIILAAYAQSKD-G 546

Query: 599 LARVASEKLFELDPENV 615
             R A +   E++ E +
Sbjct: 547 PGRRAFKFFQEMEAEGI 563



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 117/439 (26%), Positives = 206/439 (46%), Gaps = 2/439 (0%)

Query: 152 LYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDST 211
           +Y K + V  A  VFD +  K+   W  M++   +N  +++++ +F  M +  GT  D  
Sbjct: 1   MYGKCARVTDALMVFDGISAKNVFSWTMMMAAYSQNGHYREALELFTRM-QWEGTRPDKV 59

Query: 212 SVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDI 271
                L A A   EL  G +I    +  G   ++ +   LV+ Y KC +V  AE +F  +
Sbjct: 60  VFVIALDACAASGELDHGRQIHSSVVGSGLTSNIIISNSLVNMYGKCQDVPCAEKVFDGM 119

Query: 272 VRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTN 331
           +  D++S  AM++ Y  NG    +L    ++ A   + N  T V ++ V      L L  
Sbjct: 120 LLRDVVSWTAMLAVYAQNGCWSQALECLSRMDAEGVKPNQVTFVTIVDVCAKLRLLDLGR 179

Query: 332 CIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNG 391
            IH   +  G+  +  +  AL  +Y      +  + +F    + S+  W  MIAG +QNG
Sbjct: 180 KIHHRIINEGLEPDGILGNALVHMYGSCGSFDDMKSVFSRMGQSSVLLWTTMIAGCSQNG 239

Query: 392 LTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVST 451
             EE + +F++M    V  N VT  S++  C  L A+  G+ +   +    F S+  ++T
Sbjct: 240 QYEEGLLVFRKMDLEGVKANEVTYMSMVEVCRNLDAVKEGEMIDARILESPFCSSTLLAT 299

Query: 452 ALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRP 511
           +LI +Y +CG +  A+ L + M  +  V WN M++    +G   EA+ L   M   G   
Sbjct: 300 SLISLYGQCGILDRAKGLLEHMYQRDVVAWNAMVTACAQNGDNWEAIHLLRRMDMEGFGA 359

Query: 512 SGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEF 571
           + VT+LSVL AC++   + +G EI   ++     +        ++ + G+ GQ E A+  
Sbjct: 360 NKVTYLSVLEACANLEALSQGREIHARVLLCGLLQREVAVGNSVITMYGKCGQTEAAMSV 419

Query: 572 IKGLAVEPGPAVWGALLGA 590
            + +  +   + W A++ A
Sbjct: 420 FEAMPRKDDVS-WNAVINA 437



 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 96/344 (27%), Positives = 167/344 (48%), Gaps = 2/344 (0%)

Query: 254 FYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSST 313
            Y KC  V  A ++F  I   ++ S   M++ Y+ NG    +L LF ++     R +   
Sbjct: 1   MYGKCARVTDALMVFDGISAKNVFSWTMMMAAYSQNGHYREALELFTRMQWEGTRPDKVV 60

Query: 314 IVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESS 373
            V  +      G L     IHS  + SG+ SN  +  +L  +Y +  ++  A K+FD   
Sbjct: 61  FVIALDACAASGELDHGRQIHSSVVGSGLTSNIIISNSLVNMYGKCQDVPCAEKVFDGML 120

Query: 374 EKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKW 433
            + + SW AM+A Y QNG   +A+     M A  V PN VT  +I+  CA+L  + LG+ 
Sbjct: 121 LRDVVSWTAMLAVYAQNGCWSQALECLSRMDAEGVKPNQVTFVTIVDVCAKLRLLDLGRK 180

Query: 434 VHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGH 493
           +H  + +   E +  +  AL+ MY  CG+  + + +F  M   S + W TMI+G   +G 
Sbjct: 181 IHHRIINEGLEPDGILGNALVHMYGSCGSFDDMKSVFSRMGQSSVLLWTTMIAGCSQNGQ 240

Query: 494 GLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYA 553
             E L +F +M   G++ + VT++S++  C +   V+EG E+  + I +  F        
Sbjct: 241 YEEGLLVFRKMDLEGVKANEVTYMSMVEVCRNLDAVKEG-EMIDARILESPFCSSTLLAT 299

Query: 554 CMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDT 597
            ++ + G+ G L++A   ++ +  +     W A++ AC  + D 
Sbjct: 300 SLISLYGQCGILDRAKGLLEHM-YQRDVVAWNAMVTACAQNGDN 342


>gi|359481919|ref|XP_003632692.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At3g13770, mitochondrial-like [Vitis vinifera]
          Length = 1053

 Score =  449 bits (1155), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 224/572 (39%), Positives = 350/572 (61%), Gaps = 2/572 (0%)

Query: 215  AVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRP 274
            +VL        +R G  +    +K  +   VY+ T L+  Y+KC  +  A  +  ++   
Sbjct: 482  SVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMPER 541

Query: 275  DLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIH 334
            +++S  AMISGY+  G    +L LF ++L S    N  T   ++          L   IH
Sbjct: 542  NVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQIH 601

Query: 335  SFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTE 394
            S  +K+   S+  V ++L  +Y++  ++  AR++FD   E+ + S  A+I+GY Q GL E
Sbjct: 602  SLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLGLDE 661

Query: 395  EAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALI 454
            EA+ LF+ +Q   +  N VT +S+L+A + L A+  G+ VH  V        + +  +LI
Sbjct: 662  EALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSLI 721

Query: 455  DMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSG-IRPSG 513
            DMY+KCG++  +R +FD M  ++ ++WN M+ GY  HG G EA++LF  M     ++P  
Sbjct: 722  DMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVKPDS 781

Query: 514  VTFLSVLYACSHAGLVREGDEIFQSMIHDH-GFKPLAEHYACMVDILGRAGQLEKALEFI 572
            VTFL+VL  CSH G+   G EIF  M++   GF+P  EHY C+VD+ GRAG++E+A EFI
Sbjct: 782  VTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEAFEFI 841

Query: 573  KGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYL 632
            K +  EP  A+WG+LLGAC +H++ ++    + +L E++ EN G +V+LSN+Y++   + 
Sbjct: 842  KKMPFEPTAAIWGSLLGACRVHQNVHIGEFVARRLLEIESENAGNYVILSNLYASAGRWD 901

Query: 633  QAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAG 692
               TVR+++K++ + K PG + IE+  T H F + D+ HP+   ++A + +L+ K++EAG
Sbjct: 902  DVRTVRELMKEKAVIKEPGRSWIELDQTLHTFHASDRSHPRKEEVFAKVRELSIKIKEAG 961

Query: 693  FQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATK 752
            +  E    L+DV++E+KE +++ HSEKLA+AFGLI T  GT +RIIKNLR+C+DCH   K
Sbjct: 962  YVPELSCVLYDVDDEQKEKILQGHSEKLALAFGLICTPGGTPVRIIKNLRICVDCHNFAK 1021

Query: 753  FISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
            F+S+V GR + +RD NRFHH  GG CSCGDYW
Sbjct: 1022 FLSRVYGREVSLRDKNRFHHIVGGTCSCGDYW 1053



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 109/369 (29%), Positives = 195/369 (52%), Gaps = 5/369 (1%)

Query: 127 GVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMK 186
           G  +H H I + Y   +++   L+ LY K   +  AR+V D+MPE++ V W +MISG  +
Sbjct: 496 GQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMPERNVVSWTAMISGYSQ 555

Query: 187 NCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVY 246
                +++ +F +M+ +G T  +  + A VL +       +LG +I  L +K  F  H++
Sbjct: 556 RGYASEALHLFVEMLMSG-TAPNEFTFATVLTSCTSSSGFQLGRQIHSLVIKTSFESHIF 614

Query: 247 VLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASA 306
           V + L+  Y+K G++  A  +F  +   D++SC A+ISGY   G  E +L LFR+L    
Sbjct: 615 VGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLGLDEEALDLFRRLQREG 674

Query: 307 ERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAAR 366
            R N  T   ++        L     +HS  L++ +     +  +L  +YS+   +  +R
Sbjct: 675 MRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSLIDMYSKCGSLTYSR 734

Query: 367 KLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEM-QASKVAPNPVTVSSILSACAQL 425
           ++FD   E+++ SWNAM+ GY+++GL  EA+ LF+ M + +KV P+ VT  ++LS C+  
Sbjct: 735 RIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVKPDSVTFLAVLSGCSHG 794

Query: 426 GAISLG-KWVHELVKSRN-FESNIYVSTALIDMYAKCGNIVEARELFDLMSHK-SEVTWN 482
           G    G +  +E+V  ++ FE  I     ++D++ + G + EA E    M  + +   W 
Sbjct: 795 GMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEAFEFIKKMPFEPTAAIWG 854

Query: 483 TMISGYGLH 491
           +++    +H
Sbjct: 855 SLLGACRVH 863



 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 105/455 (23%), Positives = 207/455 (45%), Gaps = 38/455 (8%)

Query: 27  QTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNE 86
           + HA +I   ++  +   T+L    +  +    AR +   +P+ ++  +  +I G+S   
Sbjct: 498 RVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMPERNVVSWTAMISGYSQRG 557

Query: 87  MPKSSI-CFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFV 145
               ++  F   L   TA  P+ FT++ VL++ ++     +G  +H   I + + S +FV
Sbjct: 558 YASEALHLFVEMLMSGTA--PNEFTFATVLTSCTSSSGFQLGRQIHSLVIKTSFESHIFV 615

Query: 146 GAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGG 205
           G++L+D+Y K   +  AR+VFD +PE+D V   ++ISG  +    ++++ +F  + R  G
Sbjct: 616 GSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLGLDEEALDLFRRLQRE-G 674

Query: 206 TWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAE 265
              +  + A+VL A++ +  L  G ++    L+     +V +   L+  YSKCG +  + 
Sbjct: 675 MRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSLIDMYSKCGSLTYSR 734

Query: 266 LLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFG 325
            +F  +    +IS NAM+ GY+ +G    ++ LF+ L+    +V   ++  L        
Sbjct: 735 RIFDSMPERTVISWNAMLVGYSKHGLGREAVELFK-LMKEENKVKPDSVTFLAV------ 787

Query: 326 HLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIA 385
              L+ C H      G          L   Y  +N+ +          E  +  +  ++ 
Sbjct: 788 ---LSGCSHGGMEDRG----------LEIFYEMVNQKDGF--------EPEIEHYGCVVD 826

Query: 386 GYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWV-HELVKSRNFE 444
            + + G  EEA    ++M      P      S+L AC     + +G++V   L++  +  
Sbjct: 827 LFGRAGRVEEAFEFIKKM---PFEPTAAIWGSLLGACRVHQNVHIGEFVARRLLEIESEN 883

Query: 445 SNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEV 479
           +  YV   L ++YA  G   + R + +LM  K+ +
Sbjct: 884 AGNYV--ILSNLYASAGRWDDVRTVRELMKEKAVI 916


>gi|297738895|emb|CBI28140.3| unnamed protein product [Vitis vinifera]
          Length = 580

 Score =  449 bits (1154), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 238/566 (42%), Positives = 331/566 (58%), Gaps = 51/566 (9%)

Query: 259 GEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLI 318
           G +  A L+F  I  P   +CN++I GYT N        LF QL+          + GL 
Sbjct: 26  GSLPYARLVFNQIPNPTTFTCNSIIRGYT-NKNLPRQAILFYQLM---------MLQGLD 75

Query: 319 PVFYPFGHLHLTNC--------IHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFD 370
           P  + F  L   +C        +H    K G  S++ +   L  +YS    + +ARK+FD
Sbjct: 76  PDRFTFPSL-FKSCGVLCEGKQLHCHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFD 134

Query: 371 ESSEKSLASWNAMIAGYTQNGLT--------------------------------EEAIS 398
           +   KS+ SW  MI  Y Q  L                                 EEA+S
Sbjct: 135 KMVNKSVVSWATMIGAYAQWDLPHEAIKLFRRMEIASNLFCWNIMINGHVEDSDYEEALS 194

Query: 399 LFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYA 458
           LF EMQ S V  + VT++S+L AC  LGA+ LGKW+H  ++    E ++ + TAL+DMYA
Sbjct: 195 LFNEMQLSGVKGDKVTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYA 254

Query: 459 KCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLS 518
           KCG+I  A  +F  M  K  +TW  +I G  + G GL+AL+LF EM  S ++P  +TF+ 
Sbjct: 255 KCGSIESAMRVFQEMPEKDVMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVG 314

Query: 519 VLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVE 578
           VL ACSHAGLV EG   F SM + +G +P  EHY CMVD+LGRAG++ +A + I+ + + 
Sbjct: 315 VLAACSHAGLVNEGIAYFNSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAEDLIQNMPMA 374

Query: 579 PGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVR 638
           P   V   LL AC IH +  +A  A+++L ELDP+N G +VLLSNIYS+ +++  A  +R
Sbjct: 375 PDYFVLVGLLSACRIHGNLVVAERAAQQLIELDPKNGGTYVLLSNIYSSMKNWEAAKKMR 434

Query: 639 QVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETV 698
           +++ +R + K PGC+ IEVGG  H F  GD  HPQS+ IY  L+ +  +++ AG+  +  
Sbjct: 435 ELMVERNIKKPPGCSAIEVGGVVHEFVKGDVSHPQSSEIYETLDDMMRRLKSAGYVPDKS 494

Query: 699 TALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVT 758
             L D++E+EKE  + +HSEKLAIAFGL++T PGT IR++KNLRVC DCH+A KFIS+V 
Sbjct: 495 EVLFDMDEKEKENELSLHSEKLAIAFGLLSTTPGTPIRVVKNLRVCSDCHSAMKFISEVY 554

Query: 759 GRVIVVRDANRFHHFKGGVCSCGDYW 784
            R I+VRD NRFHHF  G CSC D+W
Sbjct: 555 NREIIVRDRNRFHHFTKGSCSCRDFW 580



 Score =  136 bits (342), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 117/460 (25%), Positives = 201/460 (43%), Gaps = 73/460 (15%)

Query: 51  LSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFT 110
           L D  +  YAR +F  IP P  F  N IIRG++N  +P+ +I FY  L     L PD FT
Sbjct: 22  LHDSGSLPYARLVFNQIPNPTTFTCNSIIRGYTNKNLPRQAILFY-QLMMLQGLDPDRFT 80

Query: 111 YSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMP 170
           +  +  +    C+   G  LH H+   G+ SD ++   L+++Y     + SARKVFDKM 
Sbjct: 81  FPSLFKSCGVLCE---GKQLHCHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMV 137

Query: 171 EKDTV--------------------------------LWNSMISGLMKNCCFQDSIWVFG 198
            K  V                                 WN MI+G +++  +++++ +F 
Sbjct: 138 NKSVVSWATMIGAYAQWDLPHEAIKLFRRMEIASNLFCWNIMINGHVEDSDYEEALSLFN 197

Query: 199 DMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKC 258
           +M +  G   D  ++A++L A   +  L LG  +     K      V + T LV  Y+KC
Sbjct: 198 EM-QLSGVKGDKVTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKC 256

Query: 259 GEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLI 318
           G +E A  +F+++   D+++  A+I G    G+   +L LF ++  S  + ++ T VG+ 
Sbjct: 257 GSIESAMRVFQEMPEKDVMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVGV- 315

Query: 319 PVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLA 378
                     L  C H+  +  GI              +  N M     +     + S+ 
Sbjct: 316 ----------LAACSHAGLVNEGI--------------AYFNSMPNKYGI-----QPSIE 346

Query: 379 SWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLG-KWVHEL 437
            +  M+    + G   EA  L Q M    +AP+   +  +LSAC   G + +  +   +L
Sbjct: 347 HYGCMVDMLGRAGRIAEAEDLIQNM---PMAPDYFVLVGLLSACRIHGNLVVAERAAQQL 403

Query: 438 VKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKS 477
           ++        YV   L ++Y+   N   A+++ +LM  ++
Sbjct: 404 IELDPKNGGTYV--LLSNIYSSMKNWEAAKKMRELMVERN 441


>gi|359497290|ref|XP_002268807.2| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49710-like [Vitis vinifera]
          Length = 719

 Score =  449 bits (1154), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 251/653 (38%), Positives = 384/653 (58%), Gaps = 16/653 (2%)

Query: 142 DLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMV 201
           ++F   A++  Y K S    A ++FD++PE D V +N++IS          ++ +F  M 
Sbjct: 73  NVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSGM- 131

Query: 202 RNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEV 261
           R  G  +D  +++AV+ A  +  ++ L  ++  + +  GF  +V V   L+++Y K G++
Sbjct: 132 REMGLDMDGFTLSAVITACCD--DVGLIGQLHSVAVSSGFDSYVSVNNALLTYYGKNGDL 189

Query: 262 ERAELLFRDI--VRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIP 319
           + A+ +F  +  +R D +S N+MI  Y  + +   +L LF++++     V+  T+  ++ 
Sbjct: 190 DDAKRVFYGMGGIR-DEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLT 248

Query: 320 VFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNE-MEAARKLFDESSEKSLA 378
            F     L      H   +K+G   NS V + L  +YS+    M   RK+F+E +E  L 
Sbjct: 249 AFTCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLV 308

Query: 379 SWNAMIAGYTQNG-LTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHEL 437
            WN M++GY+QN    E+A+  F++MQ     PN  +   ++SAC+ L + S GK +H L
Sbjct: 309 LWNTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSL 368

Query: 438 VKSRNFESN-IYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLE 496
               +  SN I V  ALI MY+KCGN+ +AR LFD M+  + V+ N+MI+GY  HG  +E
Sbjct: 369 ALKSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRMAEHNTVSLNSMIAGYAQHGIEME 428

Query: 497 ALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMV 556
           +L LF  ML   I P+ +TF+SVL AC+H G V EG   F  M      +P AEHY+CM+
Sbjct: 429 SLHLFQWMLERQIAPTSITFISVLSACAHTGRVEEGWNYFNMMKEKFNIEPEAEHYSCMI 488

Query: 557 DILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVG 616
           D+LGRAG+L +A   I  +   PG   W +LLGAC  H +  LA  A+ ++ +L+P N  
Sbjct: 489 DLLGRAGKLSEAENLIARMPFNPGSIGWASLLGACRTHGNIELAVKAANQVLQLEPSNAA 548

Query: 617 YHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTA 676
            +V+LSN+Y++   + + ATVR+ ++ R + K PGC+ IEV    HVF + D  HP    
Sbjct: 549 PYVVLSNMYASAGRWEEVATVRKFMRDRGVKKKPGCSWIEVKKRIHVFVAEDSSHPMIKE 608

Query: 677 IYAMLEKLNGKMREAGFQTETVTALHDVEEE-----EKELMMKVHSEKLAIAFGLIATEP 731
           IY  LE+++GKM+ AG+  +   AL  V+++     EKE+ +  HSEKLA+AFGLI+T+ 
Sbjct: 609 IYEFLEEMSGKMKRAGYVPDVRWAL--VKDDGTRGGEKEIRLGHHSEKLAVAFGLISTKD 666

Query: 732 GTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           G  + ++KNLR+C DCH A KFIS + GR I VRDA+RFH FK G CSCGDYW
Sbjct: 667 GEPVLVVKNLRICGDCHNAIKFISAIAGREITVRDAHRFHCFKEGQCSCGDYW 719



 Score =  217 bits (553), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 155/474 (32%), Positives = 249/474 (52%), Gaps = 19/474 (4%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           A  LF  IP+PDL  +N +I  +++      ++  ++ +R+   L  D FT S V++A  
Sbjct: 93  AHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSGMRE-MGLDMDGFTLSAVITA-- 149

Query: 120 ACCDRSIGVL--LHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPE-KDTVL 176
            CCD  +G++  LH  A+ SG+ S + V  AL+  Y K   +  A++VF  M   +D V 
Sbjct: 150 -CCD-DVGLIGQLHSVAVSSGFDSYVSVNNALLTYYGKNGDLDDAKRVFYGMGGIRDEVS 207

Query: 177 WNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLG 236
           WNSMI    ++     ++ +F +MVR G   +D  ++A+VL A   +++L  G++     
Sbjct: 208 WNSMIVAYGQHQEGSKALGLFQEMVRRGLN-VDMFTLASVLTAFTCLEDLSGGLQFHGQL 266

Query: 237 LKLGFHDHVYVLTGLVSFYSKC-GEVERAELLFRDIVRPDLISCNAMISGYTCNGK-TES 294
           +K GFH + +V +GL+  YSKC G +     +F +I  PDL+  N M+SGY+ N +  E 
Sbjct: 267 IKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVLWNTMVSGYSQNEEFLED 326

Query: 295 SLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNS-SVLTALS 353
           +L  FRQ+     R N  + V +I              IHS  LKS I SN  SV  AL 
Sbjct: 327 ALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSLALKSDIPSNRISVDNALI 386

Query: 354 TVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPV 413
            +YS+   ++ AR+LFD  +E +  S N+MIAGY Q+G+  E++ LFQ M   ++AP  +
Sbjct: 387 AMYSKCGNLQDARRLFDRMAEHNTVSLNSMIAGYAQHGIEMESLHLFQWMLERQIAPTSI 446

Query: 414 TVSSILSACAQLGAISLGKWVHELVKSR-NFESNIYVSTALIDMYAKCGNIVEARELFDL 472
           T  S+LSACA  G +  G     ++K + N E      + +ID+  + G + EA  L   
Sbjct: 447 TFISVLSACAHTGRVEEGWNYFNMMKEKFNIEPEAEHYSCMIDLLGRAGKLSEAENLIAR 506

Query: 473 MS-HKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGV---TFLSVLYA 522
           M  +   + W +++     HG+   A++  +++L   + PS       LS +YA
Sbjct: 507 MPFNPGSIGWASLLGACRTHGNIELAVKAANQVLQ--LEPSNAAPYVVLSNMYA 558



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 102/350 (29%), Positives = 164/350 (46%), Gaps = 37/350 (10%)

Query: 220 VAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIV------- 272
           +AE ++L  G  +  L +K       Y     +  YSKCG +  A   F+DI        
Sbjct: 19  IAE-RDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDISDPNVFSF 77

Query: 273 ------------------------RPDLISCNAMISGYTCNGKTESSLRLFRQLLASAER 308
                                    PDL+S N +IS Y   G+T  +L LF  +      
Sbjct: 78  NAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSGMREMGLD 137

Query: 309 VNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKL 368
           ++  T+  +I        + L   +HS  + SG  S  SV  AL T Y +  +++ A+++
Sbjct: 138 MDGFTLSAVITACCD--DVGLIGQLHSVAVSSGFDSYVSVNNALLTYYGKNGDLDDAKRV 195

Query: 369 F-DESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGA 427
           F      +   SWN+MI  Y Q+    +A+ LFQEM    +  +  T++S+L+A   L  
Sbjct: 196 FYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTAFTCLED 255

Query: 428 ISLGKWVHELVKSRNFESNIYVSTALIDMYAKC-GNIVEARELFDLMSHKSEVTWNTMIS 486
           +S G   H  +    F  N +V + LID+Y+KC G + + R++F+ ++    V WNTM+S
Sbjct: 256 LSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVLWNTMVS 315

Query: 487 GYGLHGHGLE-ALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEI 535
           GY  +   LE AL+ F +M   G RP+  +F+ V+ ACS+     +G +I
Sbjct: 316 GYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQI 365



 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 118/457 (25%), Positives = 203/457 (44%), Gaps = 42/457 (9%)

Query: 25  LTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPK-PDLFLFNVIIRGFS 83
           + Q H+  +  GF + +S    L            A+ +F+ +    D   +N +I  + 
Sbjct: 157 IGQLHSVAVSSGFDSYVSVNNALLTYYGKNGDLDDAKRVFYGMGGIRDEVSWNSMIVAYG 216

Query: 84  NNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDL 143
            ++    ++  +  + +   L  D FT + VL+A +   D S G+  HG  I +G+  + 
Sbjct: 217 QHQEGSKALGLFQEMVRR-GLNVDMFTLASVLTAFTCLEDLSGGLQFHGQLIKTGFHQNS 275

Query: 144 FVGAALVDLYFKF-SWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCF-QDSIWVFGDMV 201
            VG+ L+DLY K    +   RKVF+++ E D VLWN+M+SG  +N  F +D++  F  M 
Sbjct: 276 HVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVLWNTMVSGYSQNEEFLEDALECFRQM- 334

Query: 202 RNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGF-HDHVYVLTGLVSFYSKCGE 260
           +  G   +  S   V+ A + +     G +I  L LK     + + V   L++ YSKCG 
Sbjct: 335 QGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSLALKSDIPSNRISVDNALIAMYSKCGN 394

Query: 261 VERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPV 320
           ++ A  LF  +   + +S N+MI+GY  +G    SL LF+ +L   ER  + T +  I V
Sbjct: 395 LQDARRLFDRMAEHNTVSLNSMIAGYAQHGIEMESLHLFQWML---ERQIAPTSITFISV 451

Query: 321 FYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASW 380
                   L+ C H+  ++ G              ++  N M+    +  E+       +
Sbjct: 452 --------LSACAHTGRVEEG--------------WNYFNMMKEKFNIEPEAEH-----Y 484

Query: 381 NAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLG-KWVHELVK 439
           + MI    + G   EA +L   M      P  +  +S+L AC   G I L  K  +++++
Sbjct: 485 SCMIDLLGRAGKLSEAENLIARM---PFNPGSIGWASLLGACRTHGNIELAVKAANQVLQ 541

Query: 440 SRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHK 476
                +  YV   L +MYA  G   E   +   M  +
Sbjct: 542 LEPSNAAPYV--VLSNMYASAGRWEEVATVRKFMRDR 576



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 43/158 (27%), Positives = 70/158 (44%), Gaps = 5/158 (3%)

Query: 444 ESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSE 503
           + N++   A+I  YAK    + A +LFD +     V++NT+IS Y   G    AL LFS 
Sbjct: 71  DPNVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSG 130

Query: 504 MLHSGIRPSGVTFLSVLYA-CSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRA 562
           M   G+   G T  +V+ A C   GL+ +      S+    GF         ++   G+ 
Sbjct: 131 MREMGLDMDGFTLSAVITACCDDVGLIGQ----LHSVAVSSGFDSYVSVNNALLTYYGKN 186

Query: 563 GQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLA 600
           G L+ A     G+        W +++ A   H++ + A
Sbjct: 187 GDLDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKA 224


>gi|147801369|emb|CAN74731.1| hypothetical protein VITISV_037837 [Vitis vinifera]
          Length = 719

 Score =  449 bits (1154), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 251/653 (38%), Positives = 384/653 (58%), Gaps = 16/653 (2%)

Query: 142 DLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMV 201
           ++F   A++  Y K S    A ++FD++PE D V +N++IS          ++ +F  M 
Sbjct: 73  NVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSGM- 131

Query: 202 RNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEV 261
           R  G  +D  +++AV+ A  +  ++ L  ++  + +  GF  +V V   L+++Y K G++
Sbjct: 132 REMGLDMDXFTLSAVITACCD--DVGLIGQLHSVAVSSGFDSYVSVNNALLTYYGKNGDL 189

Query: 262 ERAELLFRDI--VRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIP 319
           + A+ +F  +  +R D +S N+MI  Y  + +   +L LF++++     V+  T+  ++ 
Sbjct: 190 DDAKRVFYGMGGIR-DEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLT 248

Query: 320 VFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNE-MEAARKLFDESSEKSLA 378
            F     L      H   +K+G   NS V + L  +YS+    M   RK+F+E +E  L 
Sbjct: 249 AFTCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLV 308

Query: 379 SWNAMIAGYTQNG-LTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHEL 437
            WN M++GY+QN    E+A+  F++MQ     PN  +   ++SAC+ L + S GK +H L
Sbjct: 309 LWNTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSL 368

Query: 438 VKSRNFESN-IYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLE 496
               +  SN I V  ALI MY+KCGN+ +AR LFD M+  + V+ N+MI+GY  HG  +E
Sbjct: 369 ALKSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRMAEHNTVSLNSMIAGYAQHGIEME 428

Query: 497 ALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMV 556
           +L LF  ML   I P+ +TF+SVL AC+H G V EG   F  M      +P AEHY+CM+
Sbjct: 429 SLHLFQWMLERQIAPTSITFISVLSACAHTGRVEEGWNYFNMMKEKFNIEPEAEHYSCMI 488

Query: 557 DILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVG 616
           D+LGRAG+L +A   I  +   PG   W +LLGAC  H +  LA  A+ ++ +L+P N  
Sbjct: 489 DLLGRAGKLSEAENLIARMPFNPGSIGWASLLGACRTHGNIELAVKAANQVLQLEPSNAA 548

Query: 617 YHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTA 676
            +V+LSN+Y++   + + ATVR+ ++ R + K PGC+ IEV    HVF + D  HP    
Sbjct: 549 PYVVLSNMYASAGRWEEVATVRKFMRDRGVKKKPGCSWIEVKKRIHVFVAEDSSHPMIKE 608

Query: 677 IYAMLEKLNGKMREAGFQTETVTALHDVEEE-----EKELMMKVHSEKLAIAFGLIATEP 731
           IY  LE+++GKM+ AG+  +   AL  V+++     EKE+ +  HSEKLA+AFGLI+T+ 
Sbjct: 609 IYEFLEEMSGKMKRAGYVPDVRWAL--VKDDGTRGGEKEIRLGHHSEKLAVAFGLISTKD 666

Query: 732 GTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           G  + ++KNLR+C DCH A KFIS + GR I VRDA+RFH FK G CSCGDYW
Sbjct: 667 GEPVLVVKNLRICGDCHNAIKFISAIAGREITVRDAHRFHCFKEGQCSCGDYW 719



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 155/474 (32%), Positives = 249/474 (52%), Gaps = 19/474 (4%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           A  LF  IP+PDL  +N +I  +++      ++  ++ +R+   L  D FT S V++A  
Sbjct: 93  AHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSGMRE-MGLDMDXFTLSAVITA-- 149

Query: 120 ACCDRSIGVL--LHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPE-KDTVL 176
            CCD  +G++  LH  A+ SG+ S + V  AL+  Y K   +  A++VF  M   +D V 
Sbjct: 150 -CCD-DVGLIGQLHSVAVSSGFDSYVSVNNALLTYYGKNGDLDDAKRVFYGMGGIRDEVS 207

Query: 177 WNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLG 236
           WNSMI    ++     ++ +F +MVR G   +D  ++A+VL A   +++L  G++     
Sbjct: 208 WNSMIVAYGQHQEGSKALGLFQEMVRRGLN-VDMFTLASVLTAFTCLEDLSGGLQFHGQL 266

Query: 237 LKLGFHDHVYVLTGLVSFYSKC-GEVERAELLFRDIVRPDLISCNAMISGYTCNGK-TES 294
           +K GFH + +V +GL+  YSKC G +     +F +I  PDL+  N M+SGY+ N +  E 
Sbjct: 267 IKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVLWNTMVSGYSQNEEFLED 326

Query: 295 SLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNS-SVLTALS 353
           +L  FRQ+     R N  + V +I              IHS  LKS I SN  SV  AL 
Sbjct: 327 ALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSLALKSDIPSNRISVDNALI 386

Query: 354 TVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPV 413
            +YS+   ++ AR+LFD  +E +  S N+MIAGY Q+G+  E++ LFQ M   ++AP  +
Sbjct: 387 AMYSKCGNLQDARRLFDRMAEHNTVSLNSMIAGYAQHGIEMESLHLFQWMLERQIAPTSI 446

Query: 414 TVSSILSACAQLGAISLGKWVHELVKSR-NFESNIYVSTALIDMYAKCGNIVEARELFDL 472
           T  S+LSACA  G +  G     ++K + N E      + +ID+  + G + EA  L   
Sbjct: 447 TFISVLSACAHTGRVEEGWNYFNMMKEKFNIEPEAEHYSCMIDLLGRAGKLSEAENLIAR 506

Query: 473 MS-HKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGV---TFLSVLYA 522
           M  +   + W +++     HG+   A++  +++L   + PS       LS +YA
Sbjct: 507 MPFNPGSIGWASLLGACRTHGNIELAVKAANQVLQ--LEPSNAAPYVVLSNMYA 558



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 101/348 (29%), Positives = 166/348 (47%), Gaps = 33/348 (9%)

Query: 220 VAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISC 279
           +AE ++L  G  +  L +K       Y     +  YSKCG +  A   F+DI  P++ S 
Sbjct: 19  IAE-RDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDISDPNVFSF 77

Query: 280 NAMISGYTCNGKTESSLRLFRQLL------------ASAERVNSSTIVGLIPVFYPFG-- 325
           NA+I+ Y    +   + +LF Q+             A A+   ++  +GL       G  
Sbjct: 78  NAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSGMREMGLD 137

Query: 326 ---------------HLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLF- 369
                           + L   +HS  + SG  S  SV  AL T Y +  +++ A+++F 
Sbjct: 138 MDXFTLSAVITACCDDVGLIGQLHSVAVSSGFDSYVSVNNALLTYYGKNGDLDDAKRVFY 197

Query: 370 DESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAIS 429
                +   SWN+MI  Y Q+    +A+ LFQEM    +  +  T++S+L+A   L  +S
Sbjct: 198 GMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTAFTCLEDLS 257

Query: 430 LGKWVHELVKSRNFESNIYVSTALIDMYAKC-GNIVEARELFDLMSHKSEVTWNTMISGY 488
            G   H  +    F  N +V + LID+Y+KC G + + R++F+ ++    V WNTM+SGY
Sbjct: 258 GGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVLWNTMVSGY 317

Query: 489 GLHGHGLE-ALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEI 535
             +   LE AL+ F +M   G RP+  +F+ V+ ACS+     +G +I
Sbjct: 318 SQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQI 365



 Score =  116 bits (291), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 118/457 (25%), Positives = 203/457 (44%), Gaps = 42/457 (9%)

Query: 25  LTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPK-PDLFLFNVIIRGFS 83
           + Q H+  +  GF + +S    L            A+ +F+ +    D   +N +I  + 
Sbjct: 157 IGQLHSVAVSSGFDSYVSVNNALLTYYGKNGDLDDAKRVFYGMGGIRDEVSWNSMIVAYG 216

Query: 84  NNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDL 143
            ++    ++  +  + +   L  D FT + VL+A +   D S G+  HG  I +G+  + 
Sbjct: 217 QHQEGSKALGLFQEMVRR-GLNVDMFTLASVLTAFTCLEDLSGGLQFHGQLIKTGFHQNS 275

Query: 144 FVGAALVDLYFKF-SWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCF-QDSIWVFGDMV 201
            VG+ L+DLY K    +   RKVF+++ E D VLWN+M+SG  +N  F +D++  F  M 
Sbjct: 276 HVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVLWNTMVSGYSQNEEFLEDALECFRQM- 334

Query: 202 RNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGF-HDHVYVLTGLVSFYSKCGE 260
           +  G   +  S   V+ A + +     G +I  L LK     + + V   L++ YSKCG 
Sbjct: 335 QGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSLALKSDIPSNRISVDNALIAMYSKCGN 394

Query: 261 VERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPV 320
           ++ A  LF  +   + +S N+MI+GY  +G    SL LF+ +L   ER  + T +  I V
Sbjct: 395 LQDARRLFDRMAEHNTVSLNSMIAGYAQHGIEMESLHLFQWML---ERQIAPTSITFISV 451

Query: 321 FYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASW 380
                   L+ C H+  ++ G              ++  N M+    +  E+       +
Sbjct: 452 --------LSACAHTGRVEEG--------------WNYFNMMKEKFNIEPEAEH-----Y 484

Query: 381 NAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLG-KWVHELVK 439
           + MI    + G   EA +L   M      P  +  +S+L AC   G I L  K  +++++
Sbjct: 485 SCMIDLLGRAGKLSEAENLIARM---PFNPGSIGWASLLGACRTHGNIELAVKAANQVLQ 541

Query: 440 SRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHK 476
                +  YV   L +MYA  G   E   +   M  +
Sbjct: 542 LEPSNAAPYV--VLSNMYASAGRWEEVATVRKFMRDR 576



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 42/158 (26%), Positives = 69/158 (43%), Gaps = 5/158 (3%)

Query: 444 ESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSE 503
           + N++   A+I  YAK    + A +LFD +     V++NT+IS Y   G    AL LFS 
Sbjct: 71  DPNVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSG 130

Query: 504 MLHSGIRPSGVTFLSVLYA-CSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRA 562
           M   G+     T  +V+ A C   GL+ +      S+    GF         ++   G+ 
Sbjct: 131 MREMGLDMDXFTLSAVITACCDDVGLIGQ----LHSVAVSSGFDSYVSVNNALLTYYGKN 186

Query: 563 GQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLA 600
           G L+ A     G+        W +++ A   H++ + A
Sbjct: 187 GDLDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKA 224


>gi|19697432|gb|AAL93067.1|AC093180_14 hypothetical protein [Oryza sativa Japonica Group]
          Length = 1012

 Score =  449 bits (1154), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 251/705 (35%), Positives = 394/705 (55%), Gaps = 2/705 (0%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           AR LF  +P+ ++  F  +++  +     +++   +  LR       + F  + +L  A 
Sbjct: 115 ARRLFDRMPERNMVSFVTLVQAHAQRGDFEAAAALFRRLRWE-GHEVNQFVLTTMLKLAI 173

Query: 120 ACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNS 179
           A     +   +H  A   G+  + FVG+ L+D Y   S V  A  VF+ +  KD V+W +
Sbjct: 174 AMDAAGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTA 233

Query: 180 MISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKL 239
           M+S   +N C +++  VF  M R  G   +  ++ +VL A   +  + LG  I    +K 
Sbjct: 234 MVSCYSENDCPENAFRVFSKM-RVSGCKPNPFALTSVLKAAVCLPSVVLGKGIHGCAIKT 292

Query: 240 GFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLF 299
                 +V   L+  Y+KCG+++ A L F  I   D+I  + MIS Y  + + E +  LF
Sbjct: 293 LNDTEPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELF 352

Query: 300 RQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRL 359
            +L+ S+   N  ++  ++        L     IH+  +K G  S+  V  AL   Y++ 
Sbjct: 353 LRLMRSSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKC 412

Query: 360 NEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSIL 419
           N+M+++ K+F    + +  SWN ++ G++Q+GL EEA+S+F EMQA+++    VT SS+L
Sbjct: 413 NDMDSSLKIFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVL 472

Query: 420 SACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEV 479
            ACA   +I     +H  ++   F ++  +  +LID YAKCG I +A ++F  +  +  +
Sbjct: 473 RACASTASIRHAGQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHLMERDII 532

Query: 480 TWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSM 539
           +WN +ISGY LHG   +AL+LF  M  S +  + +TF+++L  CS  GLV  G  +F SM
Sbjct: 533 SWNAIISGYALHGQAADALELFDRMNKSNVESNDITFVALLSVCSSTGLVNHGLSLFDSM 592

Query: 540 IHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNL 599
             DHG KP  EHY C+V +LGRAG+L  AL+FI  +   P   VW ALL +C+IHK+  L
Sbjct: 593 RIDHGIKPSMEHYTCIVRLLGRAGRLNDALQFIGDIPSAPSAMVWRALLSSCIIHKNVAL 652

Query: 600 ARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGG 659
            R ++EK+ E++P++   +VLLSN+Y+A     Q A +R+ ++   + K PG + +E+ G
Sbjct: 653 GRFSAEKILEIEPQDETTYVLLSNMYAAAGSLDQVALLRKSMRNIGVRKVPGLSWVEIKG 712

Query: 660 TPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEK 719
             H F+ G   HP    I AMLE LN K    G+  +    LHDV++E+K  M+ VHSE+
Sbjct: 713 EIHAFSVGSVDHPDMRVINAMLEWLNLKTSREGYIPDINVVLHDVDKEQKTRMLWVHSER 772

Query: 720 LAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVV 764
           LA+A+GL+ T PG  IRI+KNLR CLDCHTA   ISK+  R I+V
Sbjct: 773 LALAYGLVMTPPGHPIRILKNLRSCLDCHTAFTVISKIVKREIIV 817



 Score =  194 bits (493), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 139/491 (28%), Positives = 239/491 (48%), Gaps = 7/491 (1%)

Query: 107 DNFTYSFVLSAASACCDRSIGVLLHGHAIV-SGYGS-DLFVGAALVDLYFKFSWVKSARK 164
           D+F  +  L    A  D   G  +HGH +   G G  DLF    L+++Y K   + SAR+
Sbjct: 58  DSFACARQLQGCIARGDARGGRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLGPLASARR 117

Query: 165 VFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQ 224
           +FD+MPE++ V + +++    +   F+ +  +F  + R  G  ++   +  +L     + 
Sbjct: 118 LFDRMPERNMVSFVTLVQAHAQRGDFEAAAALFRRL-RWEGHEVNQFVLTTMLKLAIAMD 176

Query: 225 ELRLGMEIQCLGLKLGFHDH-VYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMI 283
              L   +     KLG HDH  +V +GL+  YS C  V  AE +F  IVR D +   AM+
Sbjct: 177 AAGLAGGVHSCAWKLG-HDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMV 235

Query: 284 SGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIV 343
           S Y+ N   E++ R+F ++  S  + N   +  ++        + L   IH   +K+   
Sbjct: 236 SCYSENDCPENAFRVFSKMRVSGCKPNPFALTSVLKAAVCLPSVVLGKGIHGCAIKTLND 295

Query: 344 SNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEM 403
           +   V  AL  +Y++  +++ AR  F+      +   + MI+ Y Q+   E+A  LF  +
Sbjct: 296 TEPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRL 355

Query: 404 QASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNI 463
             S V PN  ++SS+L AC  +  +  GK +H        ES+++V  AL+D YAKC ++
Sbjct: 356 MRSSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDM 415

Query: 464 VEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYAC 523
             + ++F  +   +EV+WNT++ G+   G G EAL +F EM  + +  + VT+ SVL AC
Sbjct: 416 DSSLKIFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRAC 475

Query: 524 SHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAV 583
           +    +R   +I  S I    F         ++D   + G +  AL+  + L +E     
Sbjct: 476 ASTASIRHAGQIHCS-IEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHL-MERDIIS 533

Query: 584 WGALLGACMIH 594
           W A++    +H
Sbjct: 534 WNAIISGYALH 544



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 99/358 (27%), Positives = 166/358 (46%), Gaps = 23/358 (6%)

Query: 207 WL-DSTSVAAVLPAVAEVQELRLGMEIQ-CL--GLKLG---FHDHVYVLTG--------- 250
           WL D  +  A+LP+V  V       ++Q C+  G   G    H HV    G         
Sbjct: 40  WLEDELTSLAILPSVPGVDSFACARQLQGCIARGDARGGRAVHGHVVRRGGVGRLDLFCA 99

Query: 251 --LVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAER 308
             L++ Y K G +  A  LF  +   +++S   ++  +   G  E++  LFR+L      
Sbjct: 100 NVLLNMYGKLGPLASARRLFDRMPERNMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHE 159

Query: 309 VNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKL 368
           VN   +  ++ +        L   +HS   K G   N+ V + L   YS  + +  A  +
Sbjct: 160 VNQFVLTTMLKLAIAMDAAGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHV 219

Query: 369 FDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAI 428
           F+    K    W AM++ Y++N   E A  +F +M+ S   PNP  ++S+L A   L ++
Sbjct: 220 FNGIVRKDAVVWTAMVSCYSENDCPENAFRVFSKMRVSGCKPNPFALTSVLKAAVCLPSV 279

Query: 429 SLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGY 488
            LGK +H        ++  +V  AL+DMYAKCG+I +AR  F+++ +   +  + MIS Y
Sbjct: 280 VLGKGIHGCAIKTLNDTEPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRY 339

Query: 489 GLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFK 546
                  +A +LF  ++ S + P+  +  SVL AC++   +  G +     IH+H  K
Sbjct: 340 AQSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQACTNMVQLDFGKQ-----IHNHAIK 392


>gi|449433569|ref|XP_004134570.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Cucumis sativus]
          Length = 705

 Score =  448 bits (1153), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 243/665 (36%), Positives = 376/665 (56%), Gaps = 40/665 (6%)

Query: 152 LYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDST 211
           +Y   + +  + ++F+ +     + W S+I     +     S+  F  M+ +G  + D  
Sbjct: 49  IYSHINLLHDSLRLFNTIHFPPALAWKSVIRCYTSHGLPHQSLGSFIGMLASG-LYPDHN 107

Query: 212 SVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSK-------------C 258
              +VL + A + +L LG  +    +++G    +Y    L++ YSK              
Sbjct: 108 VFPSVLKSCALLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRLGA 167

Query: 259 GEV-----ERAE------LLFRDIVRP--------DLISCNAMISGYTCNGKTESSLRLF 299
           GEV     ER        +L  D VR         DL+S N +I+G   NG  E +LR+ 
Sbjct: 168 GEVFDEMTERTRSVRTVSVLSEDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRMI 227

Query: 300 RQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRL 359
           R++  +  + +S T+  ++P+      +     IH   ++ G+ ++  V ++L  +Y++ 
Sbjct: 228 REMGGANLKPDSFTLSSVLPLIAENVDISRGKEIHGCSIRQGLDADIYVASSLIDMYAKC 287

Query: 360 NEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSIL 419
             +  + ++F   +E+   SWN++IAG  QNGL +E +  F++M  +K+ P   + SSI+
Sbjct: 288 TRVADSCRVFTLLTERDGISWNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIM 347

Query: 420 SACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEV 479
            ACA L  + LGK +H  +    F+ NI+++++L+DMYAKCGNI  A+++FD M  +  V
Sbjct: 348 PACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLRDMV 407

Query: 480 TWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSM 539
           +W  MI G  LHG   +A++LF +M   GI+       +VL ACSH GLV E  + F SM
Sbjct: 408 SWTAMIMGCALHGQAPDAIELFEQMETEGIK-------AVLTACSHGGLVDEAWKYFNSM 460

Query: 540 IHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNL 599
             D G  P  EHYA + D+LGRAG+LE+A +FI G+ + P  ++W  LL AC +HK+ ++
Sbjct: 461 TRDFGIAPGVEHYAAVSDLLGRAGRLEEAYDFICGMHIGPTGSIWATLLSACRVHKNIDM 520

Query: 600 ARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGG 659
           A   + ++ E+DP N G ++LL+NIYSA R + +AA  R  +++  + K P C+ IEV  
Sbjct: 521 AEKVANRILEVDPNNTGAYILLANIYSAARRWKEAAKWRASMRRIGIRKTPACSWIEVKN 580

Query: 660 TPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEK 719
             + F +GD+ HP    I   +E L   M + G+  +T    HDVEEE+K+ ++  HSE+
Sbjct: 581 KVYAFMAGDESHPCYEKIREAMEVLVELMEKEGYVPDTSEVHHDVEEEQKKYLVCSHSER 640

Query: 720 LAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCS 779
           LAI FG+I T  G  IR+ KNLRVC DCHTATKFISK+ GR IVVRD +RFHHFK G CS
Sbjct: 641 LAIVFGIINTPAGMTIRVTKNLRVCTDCHTATKFISKIVGREIVVRDNSRFHHFKNGTCS 700

Query: 780 CGDYW 784
           CGDYW
Sbjct: 701 CGDYW 705



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 130/509 (25%), Positives = 242/509 (47%), Gaps = 50/509 (9%)

Query: 20  KTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRL-SDFKATCYARALFFSIPKPDLFLFNVI 78
           K++SQ  Q HAQ++   FQ        L   + S       +  LF +I  P    +  +
Sbjct: 20  KSRSQAQQLHAQVL--KFQASSLCNLSLLLSIYSHINLLHDSLRLFNTIHFPPALAWKSV 77

Query: 79  IRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSG 138
           IR ++++ +P  S+  +  +   + L PD+  +  VL + +   D ++G  LHG+ I  G
Sbjct: 78  IRCYTSHGLPHQSLGSFIGMLA-SGLYPDHNVFPSVLKSCALLMDLNLGESLHGYIIRVG 136

Query: 139 YGSDLFVGAALVDLYFKFSWVK--------------------------------SARKVF 166
              DL+ G AL+++Y K  +++                                S RK+F
Sbjct: 137 LDFDLYTGNALMNMYSKLRFLEESGRQRLGAGEVFDEMTERTRSVRTVSVLSEDSVRKIF 196

Query: 167 DKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWL--DSTSVAAVLPAVAEVQ 224
           + MPEKD V WN++I+G  +N  +++++ +  +M   GG  L  DS ++++VLP +AE  
Sbjct: 197 EMMPEKDLVSWNTIIAGNARNGLYEETLRMIREM---GGANLKPDSFTLSSVLPLIAENV 253

Query: 225 ELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMIS 284
           ++  G EI    ++ G    +YV + L+  Y+KC  V  +  +F  +   D IS N++I+
Sbjct: 254 DISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCTRVADSCRVFTLLTERDGISWNSIIA 313

Query: 285 GYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVS 344
           G   NG  +  LR FRQ+L +  +  S +   ++P       LHL   +H +  ++G   
Sbjct: 314 GCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDE 373

Query: 345 NSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQ 404
           N  + ++L  +Y++   +  A+++FD    + + SW AMI G   +G   +AI LF++M+
Sbjct: 374 NIFIASSLVDMYAKCGNIRTAKQIFDRMRLRDMVSWTAMIMGCALHGQAPDAIELFEQME 433

Query: 405 ASKVAPNPVTVSSILSACAQLGAISLG-KWVHELVKSRNFESNIYVSTALIDMYAKCGNI 463
                     + ++L+AC+  G +    K+ + + +       +    A+ D+  + G +
Sbjct: 434 TEG-------IKAVLTACSHGGLVDEAWKYFNSMTRDFGIAPGVEHYAAVSDLLGRAGRL 486

Query: 464 VEARELFDLMS-HKSEVTWNTMISGYGLH 491
            EA +    M    +   W T++S   +H
Sbjct: 487 EEAYDFICGMHIGPTGSIWATLLSACRVH 515


>gi|15218216|ref|NP_173004.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75191104|sp|Q9M9E2.1|PPR45_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g15510, chloroplastic; Flags: Precursor
 gi|8072389|gb|AAF71977.1|AC013453_2 Hypothetical protein [Arabidopsis thaliana]
 gi|300825685|gb|ADK35876.1| chloroplast vanilla cream 1 [Arabidopsis thaliana]
 gi|332191210|gb|AEE29331.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 866

 Score =  448 bits (1153), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 256/724 (35%), Positives = 402/724 (55%), Gaps = 6/724 (0%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           A  +F  + + +LF +NV++ G++       ++C Y  +     + PD +T+  VL    
Sbjct: 148 AWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCG 207

Query: 120 ACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNS 179
              D + G  +H H +  GY  D+ V  AL+ +Y K   VKSAR +FD+MP +D + WN+
Sbjct: 208 GIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNA 267

Query: 180 MISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKL 239
           MISG  +N    + + +F  M R      D  ++ +V+ A   + + RLG +I    +  
Sbjct: 268 MISGYFENGMCHEGLELFFAM-RGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITT 326

Query: 240 GFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLF 299
           GF   + V   L   Y   G    AE LF  + R D++S   MISGY  N   + ++  +
Sbjct: 327 GFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTY 386

Query: 300 RQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRL 359
           R +   + + +  T+  ++      G L     +H   +K+ ++S   V   L  +YS+ 
Sbjct: 387 RMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKC 446

Query: 360 NEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSIL 419
             ++ A  +F     K++ SW ++IAG   N    EA+   ++M+ + + PN +T+++ L
Sbjct: 447 KCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQMKMT-LQPNAITLTAAL 505

Query: 420 SACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEV 479
           +ACA++GA+  GK +H  V       + ++  AL+DMY +CG +  A   F+  S K +V
Sbjct: 506 AACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFN--SQKKDV 563

Query: 480 T-WNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQS 538
           T WN +++GY   G G   ++LF  M+ S +RP  +TF+S+L  CS + +VR+G   F  
Sbjct: 564 TSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSK 623

Query: 539 MIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTN 598
           M  D+G  P  +HYAC+VD+LGRAG+L++A +FI+ + V P PAVWGALL AC IH   +
Sbjct: 624 M-EDYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRIHHKID 682

Query: 599 LARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVG 658
           L  ++++ +FELD ++VGY++LL N+Y+    + + A VR+++K+  L    GC+ +EV 
Sbjct: 683 LGELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKENGLTVDAGCSWVEVK 742

Query: 659 GTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSE 718
           G  H F S D+ HPQ+  I  +LE    KM E G    + ++  D  E  ++ +   HSE
Sbjct: 743 GKVHAFLSDDKYHPQTKEINTVLEGFYEKMSEVGLTKISESSSMDETEISRDEIFCGHSE 802

Query: 719 KLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVC 778
           + AIAFGLI T PG  I + KNL +C +CH   KFISK   R I VRDA  FHHFK G C
Sbjct: 803 RKAIAFGLINTVPGMPIWVTKNLSMCENCHDTVKFISKTVRREISVRDAEHFHHFKDGEC 862

Query: 779 SCGD 782
           SCGD
Sbjct: 863 SCGD 866



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 128/428 (29%), Positives = 217/428 (50%), Gaps = 10/428 (2%)

Query: 145 VGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNG 204
           +G A + ++ +F  +  A  VF KM E++   WN ++ G  K   F +++ ++  M+  G
Sbjct: 131 LGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVG 190

Query: 205 GTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERA 264
           G   D  +   VL     + +L  G E+    ++ G+   + V+  L++ Y KCG+V+ A
Sbjct: 191 GVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSA 250

Query: 265 ELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPF 324
            LLF  + R D+IS NAMISGY  NG     L LF  +   +   +  T+  +I      
Sbjct: 251 RLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELL 310

Query: 325 GHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMI 384
           G   L   IH++ + +G   + SV  +L+ +Y        A KLF     K + SW  MI
Sbjct: 311 GDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMI 370

Query: 385 AGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFE 444
           +GY  N L ++AI  ++ M    V P+ +TV+++LSACA LG +  G  +H+L       
Sbjct: 371 SGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLI 430

Query: 445 SNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEM 504
           S + V+  LI+MY+KC  I +A ++F  +  K+ ++W ++I+G  L+    EAL +F   
Sbjct: 431 SYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEAL-IFLRQ 489

Query: 505 LHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHD----HGFKPLAEHYACMVDILG 560
           +   ++P+ +T  + L AC+  G +  G EI   ++        F P A     ++D+  
Sbjct: 490 MKMTLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNA-----LLDMYV 544

Query: 561 RAGQLEKA 568
           R G++  A
Sbjct: 545 RCGRMNTA 552



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 80/259 (30%), Positives = 124/259 (47%), Gaps = 1/259 (0%)

Query: 283 ISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGI 342
           + G   NGK E +++L   +      V+    V L+ +          + ++S  L S  
Sbjct: 66  LHGLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMS 125

Query: 343 VSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQE 402
                +  A   ++ R   +  A  +F + SE++L SWN ++ GY + G  +EA+ L+  
Sbjct: 126 SLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHR 185

Query: 403 M-QASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCG 461
           M     V P+  T   +L  C  +  ++ GK VH  V    +E +I V  ALI MY KCG
Sbjct: 186 MLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCG 245

Query: 462 NIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLY 521
           ++  AR LFD M  +  ++WN MISGY  +G   E L+LF  M    + P  +T  SV+ 
Sbjct: 246 DVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVIS 305

Query: 522 ACSHAGLVREGDEIFQSMI 540
           AC   G  R G +I   +I
Sbjct: 306 ACELLGDRRLGRDIHAYVI 324



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 113/451 (25%), Positives = 195/451 (43%), Gaps = 51/451 (11%)

Query: 29  HAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNEMP 88
           HA +I  GF  D+S    L     +  +   A  LF  + + D+  +  +I G+  N +P
Sbjct: 320 HAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLP 379

Query: 89  KSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAA 148
             +I  Y  + +++ + PD  T + VLSA +   D   GV LH  AI +   S + V   
Sbjct: 380 DKAIDTYRMMDQDS-VKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANN 438

Query: 149 LVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGL-MKNCCFQDSIWVFGDMVRNGGTW 207
           L+++Y K   +  A  +F  +P K+ + W S+I+GL + N CF+  I+     +R     
Sbjct: 439 LINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIF-----LRQMKMT 493

Query: 208 L--DSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAE 265
           L  ++ ++ A L A A +  L  G EI    L+ G     ++   L+  Y +CG +  A 
Sbjct: 494 LQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAW 553

Query: 266 LLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFG 325
             F    + D+ S N +++GY+  G+    + LF +++ S  R +  T + L        
Sbjct: 554 SQFNS-QKKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISL-------- 604

Query: 326 HLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIA 385
              L  C  S  ++ G++  S                    K+ D     +L  +  ++ 
Sbjct: 605 ---LCGCSKSQMVRQGLMYFS--------------------KMEDYGVTPNLKHYACVVD 641

Query: 386 GYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFE- 444
              + G  +EA    Q+M    V P+P    ++L+AC     I LG    EL     FE 
Sbjct: 642 LLGRAGELQEAHKFIQKM---PVTPDPAVWGALLNACRIHHKIDLG----ELSAQHIFEL 694

Query: 445 --SNIYVSTALIDMYAKCGNIVEARELFDLM 473
              ++     L ++YA CG   E  ++  +M
Sbjct: 695 DKKSVGYYILLCNLYADCGKWREVAKVRRMM 725



 Score = 76.6 bits (187), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 70/291 (24%), Positives = 119/291 (40%), Gaps = 39/291 (13%)

Query: 386 GYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFES 445
           G   NG  EEA+ L   MQ  +VA +     +++  C    A   G  V+ +  S     
Sbjct: 68  GLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSL 127

Query: 446 NIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEML 505
            + +  A + M+ + GN+V+A  +F  MS ++  +WN ++ GY   G+  EA+ L+  ML
Sbjct: 128 GVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRML 187

Query: 506 H-SGIRPSGVTFLSVLYACS-----------HAGLVREGDEIFQSMIH------------ 541
              G++P   TF  VL  C            H  +VR G E+   +++            
Sbjct: 188 WVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDV 247

Query: 542 -------DHGFKPLAEHYACMVDILGRAGQLEKALEF---IKGLAVEPGPAVWGALLGAC 591
                  D   +     +  M+      G   + LE    ++GL+V+P      +++ AC
Sbjct: 248 KSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISAC 307

Query: 592 MIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVK 642
            +  D  L R     +        G+ V +S   S  + YL A + R+  K
Sbjct: 308 ELLGDRRLGRDIHAYVI-----TTGFAVDISVCNSLTQMYLNAGSWREAEK 353


>gi|15242550|ref|NP_196557.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75170796|sp|Q9FIB2.1|PP373_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At5g09950
 gi|9758973|dbj|BAB09416.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|332004087|gb|AED91470.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 995

 Score =  448 bits (1153), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 264/773 (34%), Positives = 416/773 (53%), Gaps = 17/773 (2%)

Query: 25  LTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSN 84
           L Q    I   G   DL   + L    +   +  YAR +F  +   +    N ++ G   
Sbjct: 227 LEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVR 286

Query: 85  NEMPKSSICFYTHLRKNTALTPDNFTY---SFVLSAASACCDRSIGVLLHGHAIVSGYGS 141
            +  + +   +  +     ++P+++     SF   + +       G  +HGH I +G   
Sbjct: 287 QKWGEEATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVD 346

Query: 142 DLF-VGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDM 200
            +  +G  LV++Y K   +  AR+VF  M +KD+V WNSMI+GL +N CF +++  +  M
Sbjct: 347 FMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSM 406

Query: 201 VRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGE 260
            R+      S ++ + L + A ++  +LG +I    LKLG   +V V   L++ Y++ G 
Sbjct: 407 RRHD-ILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGY 465

Query: 261 VERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLR----LFRQLLASAERVNSSTIVG 316
           +     +F  +   D +S N++I       ++E SL      F     + +++N  T   
Sbjct: 466 LNECRKIFSSMPEHDQVSWNSIIGALA---RSERSLPEAVVCFLNAQRAGQKLNRITFSS 522

Query: 317 LIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEK- 375
           ++          L   IH   LK+ I   ++   AL   Y +  EM+   K+F   +E+ 
Sbjct: 523 VLSAVSSLSFGELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERR 582

Query: 376 SLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVH 435
              +WN+MI+GY  N L  +A+ L   M  +    +    +++LSA A +  +  G  VH
Sbjct: 583 DNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVH 642

Query: 436 ELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGL 495
                   ES++ V +AL+DMY+KCG +  A   F+ M  ++  +WN+MISGY  HG G 
Sbjct: 643 ACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGE 702

Query: 496 EALQLFSEM-LHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYAC 554
           EAL+LF  M L     P  VTF+ VL ACSHAGL+ EG + F+SM   +G  P  EH++C
Sbjct: 703 EALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSC 762

Query: 555 MVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGAC--MIHKDTNLARVASEKLFELDP 612
           M D+LGRAG+L+K  +FI+ + ++P   +W  +LGAC     +   L + A+E LF+L+P
Sbjct: 763 MADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEP 822

Query: 613 ENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHP 672
           EN   +VLL N+Y+A   +      R+ +K   + K  G + + +    H+F +GD+ HP
Sbjct: 823 ENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWVTMKDGVHMFVAGDKSHP 882

Query: 673 QSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPG 732
            +  IY  L++LN KMR+AG+  +T  AL+D+E+E KE ++  HSEKLA+AF L A    
Sbjct: 883 DADVIYKKLKELNRKMRDAGYVPQTGFALYDLEQENKEEILSYHSEKLAVAFVLAAQRSS 942

Query: 733 T-EIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           T  IRI+KNLRVC DCH+A K+ISK+ GR I++RD+NRFHHF+ G CSC D+W
Sbjct: 943 TLPIRIMKNLRVCGDCHSAFKYISKIEGRQIILRDSNRFHHFQDGACSCSDFW 995



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 121/443 (27%), Positives = 211/443 (47%), Gaps = 34/443 (7%)

Query: 115 LSAASACCD-RSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKD 173
           LS   +C   R      H     +    D+++   L++ Y +     SARKVFD+MP ++
Sbjct: 7   LSFVQSCVGHRGAARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRN 66

Query: 174 TVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRL--GME 231
            V W  ++SG  +N   ++++    DMV+  G + +  +  +VL A  E+  + +  G +
Sbjct: 67  CVSWACIVSGYSRNGEHKEALVFLRDMVKE-GIFSNQYAFVSVLRACQEIGSVGILFGRQ 125

Query: 232 IQCLGLKLGFHDHVYVLTGLVSFYSKC-GEVERAELLFRDIVRPDLISCNAMISGYTCNG 290
           I  L  KL +     V   L+S Y KC G V  A   F DI   + +S N++IS Y+  G
Sbjct: 126 IHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAG 185

Query: 291 KTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNC------------IHSFCL 338
              S+ R+F  +     R          P  Y FG L  T C            I     
Sbjct: 186 DQRSAFRIFSSMQYDGSR----------PTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQ 235

Query: 339 KSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAIS 398
           KSG++++  V + L + +++   +  ARK+F++   ++  + N ++ G  +    EEA  
Sbjct: 236 KSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATK 295

Query: 399 LFQEMQASKVAPNPVTVSSILS-----ACAQLGAISLGKWVH-ELVKSRNFESNIYVSTA 452
           LF +M  S +  +P +   +LS     + A+   +  G+ VH  ++ +   +  + +   
Sbjct: 296 LFMDMN-SMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNG 354

Query: 453 LIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPS 512
           L++MYAKCG+I +AR +F  M+ K  V+WN+MI+G   +G  +EA++ +  M    I P 
Sbjct: 355 LVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPG 414

Query: 513 GVTFLSVLYACSHAGLVREGDEI 535
             T +S L +C+     + G +I
Sbjct: 415 SFTLISSLSSCASLKWAKLGQQI 437



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 43/136 (31%), Positives = 68/136 (50%), Gaps = 6/136 (4%)

Query: 411 NPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELF 470
           N V +S + S     GA    ++ H  +     + ++Y+   LI+ Y + G+ V AR++F
Sbjct: 3   NCVPLSFVQSCVGHRGA---ARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVF 59

Query: 471 DLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVR 530
           D M  ++ V+W  ++SGY  +G   EAL    +M+  GI  +   F+SVL AC   G V 
Sbjct: 60  DEMPLRNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSV- 118

Query: 531 EGDEIFQSMIHDHGFK 546
               +F   IH   FK
Sbjct: 119 --GILFGRQIHGLMFK 132


>gi|449435276|ref|XP_004135421.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930-like [Cucumis sativus]
 gi|449493520|ref|XP_004159329.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930-like [Cucumis sativus]
          Length = 743

 Score =  448 bits (1152), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 239/674 (35%), Positives = 375/674 (55%), Gaps = 31/674 (4%)

Query: 142 DLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMV 201
           +LF    L+  Y K  +++  ++VFD MP  D V WNS++SG   N    +S+ V+  M+
Sbjct: 70  NLFSWNTLLSAYSKLGYLQDMQRVFDSMPNHDVVSWNSLLSGYAGNGLISESVRVYNMML 129

Query: 202 RNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEV 261
           ++G   L+  + + +L   +    + LG +I     K G+  +++V + LV  Y+K G +
Sbjct: 130 KDGSVNLNRITFSTMLILSSNRGFVDLGRQIHGQIFKFGYQSYLFVGSPLVDMYAKTGFI 189

Query: 262 E-------------------------------RAELLFRDIVRPDLISCNAMISGYTCNG 290
                                            AE LF ++   D IS   +I+G T NG
Sbjct: 190 NDANRIFEEIPEKNIVVYNTMITGLLRCRFIVEAEQLFDNMPEKDSISWTTIITGLTQNG 249

Query: 291 KTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLT 350
             + ++  F+++      ++  T   ++     F  L     IH++ +++    N  V +
Sbjct: 250 LFKEAVDKFKEMGIEGFCMDQFTFGSVLTACGGFLALDEGKQIHAYIIRTDYQDNIFVGS 309

Query: 351 ALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAP 410
           AL  +Y +   ++ A  +F +   K++ SW AM+ GY QNG +EEA+ +F +MQ +++ P
Sbjct: 310 ALLDMYCKCRNVKYAEAVFRKMRHKNVISWTAMLVGYGQNGYSEEAVRIFCDMQRNEIHP 369

Query: 411 NPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELF 470
           +  T+ S++S+CA L ++  G   H    +      + VS ALI +Y KCG++  A +LF
Sbjct: 370 DDFTLGSVISSCANLASLEEGAQFHGQALASGLICFVTVSNALITLYGKCGSLEHAHQLF 429

Query: 471 DLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVR 530
             M  + EV+W  ++SGY   G   E + LF  ML  GI P GVTF+ VL ACS AGLV 
Sbjct: 430 HEMKIRDEVSWTALVSGYAQFGKANETISLFETMLAHGIVPDGVTFVGVLSACSRAGLVE 489

Query: 531 EGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGA 590
           +G   F+ M+ +H   P+ +HY CM+D+L RAG+LE+A  FI  +   P    W  LL +
Sbjct: 490 KGYHYFECMVKEHRITPIPDHYTCMIDLLSRAGRLEEAKNFINQMPFSPDAIGWATLLSS 549

Query: 591 CMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAP 650
           C ++ +  + + A+E L +L+P+N   ++LLS+IY+A+  +   A +R+ +++  + K P
Sbjct: 550 CRLNGNLEIGKWAAESLHKLEPQNPASYILLSSIYAAKGKWDDVAKLRKGMREMGVKKEP 609

Query: 651 GCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKE 710
           G + I+     H+F++ D+  P S  IYA LE L  KM E G+  +    LHDVE+ EK 
Sbjct: 610 GHSWIKYKNKVHIFSADDRSSPFSDQIYAKLESLYLKMIEEGYVPDMSFVLHDVEKSEKI 669

Query: 711 LMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRF 770
            M+  HSEKLAIAFGL+    G +IR++KNLRVC DCH ATK+IS++T R I+VRDA RF
Sbjct: 670 KMLNHHSEKLAIAFGLLFIPDGLQIRVVKNLRVCGDCHNATKYISRITQREILVRDAVRF 729

Query: 771 HHFKGGVCSCGDYW 784
           H FK GVCSCGD+W
Sbjct: 730 HLFKDGVCSCGDFW 743



 Score =  206 bits (524), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 149/517 (28%), Positives = 255/517 (49%), Gaps = 44/517 (8%)

Query: 41  LSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRK 100
           LS  +KL + L D +       +F S+P  D+  +N ++ G++ N +   S+  Y  + K
Sbjct: 78  LSAYSKLGY-LQDMQR------VFDSMPNHDVVSWNSLLSGYAGNGLISESVRVYNMMLK 130

Query: 101 NTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVK 160
           + ++  +  T+S +L  +S      +G  +HG     GY S LFVG+ LVD+Y K  ++ 
Sbjct: 131 DGSVNLNRITFSTMLILSSNRGFVDLGRQIHGQIFKFGYQSYLFVGSPLVDMYAKTGFIN 190

Query: 161 SARKVFDKMPEKDTVLWNSMISGLMKNCCF-------------QDSI-W--VFGDMVRNG 204
            A ++F+++PEK+ V++N+MI+GL++ C F             +DSI W  +   + +NG
Sbjct: 191 DANRIFEEIPEKNIVVYNTMITGLLR-CRFIVEAEQLFDNMPEKDSISWTTIITGLTQNG 249

Query: 205 ---------------GTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLT 249
                          G  +D  +  +VL A      L  G +I    ++  + D+++V +
Sbjct: 250 LFKEAVDKFKEMGIEGFCMDQFTFGSVLTACGGFLALDEGKQIHAYIIRTDYQDNIFVGS 309

Query: 250 GLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERV 309
            L+  Y KC  V+ AE +FR +   ++IS  AM+ GY  NG +E ++R+F  +  +    
Sbjct: 310 ALLDMYCKCRNVKYAEAVFRKMRHKNVISWTAMLVGYGQNGYSEEAVRIFCDMQRNEIHP 369

Query: 310 NSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLF 369
           +  T+  +I        L      H   L SG++   +V  AL T+Y +   +E A +LF
Sbjct: 370 DDFTLGSVISSCANLASLEEGAQFHGQALASGLICFVTVSNALITLYGKCGSLEHAHQLF 429

Query: 370 DESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAIS 429
            E   +   SW A+++GY Q G   E ISLF+ M A  + P+ VT   +LSAC++ G + 
Sbjct: 430 HEMKIRDEVSWTALVSGYAQFGKANETISLFETMLAHGIVPDGVTFVGVLSACSRAGLVE 489

Query: 430 LGKWVHE-LVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSE-VTWNTMISG 487
            G    E +VK           T +ID+ ++ G + EA+   + M    + + W T++S 
Sbjct: 490 KGYHYFECMVKEHRITPIPDHYTCMIDLLSRAGRLEEAKNFINQMPFSPDAIGWATLLSS 549

Query: 488 YGLHGHGLEALQLFSEMLH--SGIRPSGVTFLSVLYA 522
             L+G+ LE  +  +E LH      P+    LS +YA
Sbjct: 550 CRLNGN-LEIGKWAAESLHKLEPQNPASYILLSSIYA 585



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 112/449 (24%), Positives = 192/449 (42%), Gaps = 79/449 (17%)

Query: 210 STSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFR 269
           S    A L    E +      ++ C  ++   +   ++   L++ Y K G+++ A  +F 
Sbjct: 5   SNYYTAALKFCCEARNRAQVKKLHCRIIRTLTNPETFLYNNLINTYGKLGDLKNARNVFD 64

Query: 270 DIVRPDLISC-------------------------------NAMISGYTCNGKTESSLRL 298
            I +P+L S                                N+++SGY  NG    S+R+
Sbjct: 65  HIPQPNLFSWNTLLSAYSKLGYLQDMQRVFDSMPNHDVVSWNSLLSGYAGNGLISESVRV 124

Query: 299 FRQLLASAE-RVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYS 357
           +  +L      +N  T   ++ +    G + L   IH    K G  S   V + L  +Y+
Sbjct: 125 YNMMLKDGSVNLNRITFSTMLILSSNRGFVDLGRQIHGQIFKFGYQSYLFVGSPLVDMYA 184

Query: 358 RLNEMEAARKLFDESSEKSLA-------------------------------SWNAMIAG 386
           +   +  A ++F+E  EK++                                SW  +I G
Sbjct: 185 KTGFINDANRIFEEIPEKNIVVYNTMITGLLRCRFIVEAEQLFDNMPEKDSISWTTIITG 244

Query: 387 YTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESN 446
            TQNGL +EA+  F+EM       +  T  S+L+AC    A+  GK +H  +   +++ N
Sbjct: 245 LTQNGLFKEAVDKFKEMGIEGFCMDQFTFGSVLTACGGFLALDEGKQIHAYIIRTDYQDN 304

Query: 447 IYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLH 506
           I+V +AL+DMY KC N+  A  +F  M HK+ ++W  M+ GYG +G+  EA+++F +M  
Sbjct: 305 IFVGSALLDMYCKCRNVKYAEAVFRKMRHKNVISWTAMLVGYGQNGYSEEAVRIFCDMQR 364

Query: 507 SGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDI-------L 559
           + I P   T  SV+ +C++   + EG +        HG + LA    C V +        
Sbjct: 365 NEIHPDDFTLGSVISSCANLASLEEGAQF-------HG-QALASGLICFVTVSNALITLY 416

Query: 560 GRAGQLEKALEFIKGLAVEPGPAVWGALL 588
           G+ G LE A +    + +      W AL+
Sbjct: 417 GKCGSLEHAHQLFHEMKIRD-EVSWTALV 444



 Score = 75.9 bits (185), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 68/287 (23%), Positives = 128/287 (44%), Gaps = 17/287 (5%)

Query: 12  FLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPD 71
           FL+L +G        Q HA II   +Q+++   + L       +   YA A+F  +   +
Sbjct: 283 FLALDEG-------KQIHAYIIRTDYQDNIFVGSALLDMYCKCRNVKYAEAVFRKMRHKN 335

Query: 72  LFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLH 131
           +  +  ++ G+  N   + ++  +  +++N  + PD+FT   V+S+ +       G   H
Sbjct: 336 VISWTAMLVGYGQNGYSEEAVRIFCDMQRN-EIHPDDFTLGSVISSCANLASLEEGAQFH 394

Query: 132 GHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQ 191
           G A+ SG    + V  AL+ LY K   ++ A ++F +M  +D V W +++SG  +     
Sbjct: 395 GQALASGLICFVTVSNALITLYGKCGSLEHAHQLFHEMKIRDEVSWTALVSGYAQFGKAN 454

Query: 192 DSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGME-IQCLGLK---LGFHDHVYV 247
           ++I +F  M+ +G    D  +   VL A +    +  G    +C+  +       DH   
Sbjct: 455 ETISLFETMLAHGIV-PDGVTFVGVLSACSRAGLVEKGYHYFECMVKEHRITPIPDH--- 510

Query: 248 LTGLVSFYSKCGEVERAELLFRDI-VRPDLISCNAMISGYTCNGKTE 293
            T ++   S+ G +E A+     +   PD I    ++S    NG  E
Sbjct: 511 YTCMIDLLSRAGRLEEAKNFINQMPFSPDAIGWATLLSSCRLNGNLE 557



 Score = 59.3 bits (142), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 48/209 (22%), Positives = 101/209 (48%), Gaps = 19/209 (9%)

Query: 410 PNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEAREL 469
           P     +++++   +LG +   + V + +     + N++    L+  Y+K G + + + +
Sbjct: 38  PETFLYNNLINTYGKLGDLKNARNVFDHIP----QPNLFSWNTLLSAYSKLGYLQDMQRV 93

Query: 470 FDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSG-IRPSGVTFLSVLYACSHAGL 528
           FD M +   V+WN+++SGY  +G   E++++++ ML  G +  + +TF ++L   S+ G 
Sbjct: 94  FDSMPNHDVVSWNSLLSGYAGNGLISESVRVYNMMLKDGSVNLNRITFSTMLILSSNRGF 153

Query: 529 VREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALL 588
           V  G +I    I   G++      + +VD+  + G +  A    + +  E    V+  ++
Sbjct: 154 VDLGRQI-HGQIFKFGYQSYLFVGSPLVDMYAKTGFINDANRIFEEIP-EKNIVVYNTMI 211

Query: 589 GACMIHKDTNLAR----VASEKLFELDPE 613
                   T L R    V +E+LF+  PE
Sbjct: 212 --------TGLLRCRFIVEAEQLFDNMPE 232


>gi|356507248|ref|XP_003522381.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
           mitochondrial-like [Glycine max]
          Length = 635

 Score =  448 bits (1152), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 245/655 (37%), Positives = 362/655 (55%), Gaps = 69/655 (10%)

Query: 141 SDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDM 200
           +++     L+  Y +   + SA +VF+ M  K TV WNS+++   K              
Sbjct: 39  NNVIASNKLIASYVRCGDIDSAVRVFEDMKVKSTVTWNSILAAFAKK------------- 85

Query: 201 VRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHD-----------HVYVLT 249
               G +  +  +   +P   +   +   + + C    LG HD            V    
Sbjct: 86  ---PGHFEYARQLFEKIP---QPNTVSYNIMLACHWHHLGVHDARGFFDSMPLKDVASWN 139

Query: 250 GLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERV 309
            ++S  ++ G +  A  LF  +   + +S +AM+SGY   G  ++++             
Sbjct: 140 TMISALAQVGLMGEARRLFSAMPEKNCVSWSAMVSGYVACGDLDAAV------------- 186

Query: 310 NSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLF 369
                                 C ++  ++S I       TA+ T Y +   +E A +LF
Sbjct: 187 ---------------------ECFYAAPMRSVIT-----WTAMITGYMKFGRVELAERLF 220

Query: 370 DESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAIS 429
            E S ++L +WNAMIAGY +NG  E+ + LF+ M  + V PN ++++S+L  C+ L A+ 
Sbjct: 221 QEMSMRTLVTWNAMIAGYVENGRAEDGLRLFRTMLETGVKPNALSLTSVLLGCSNLSALQ 280

Query: 430 LGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYG 489
           LGK VH+LV      S+    T+L+ MY+KCG++ +A ELF  +  K  V WN MISGY 
Sbjct: 281 LGKQVHQLVCKCPLSSDTTAGTSLVSMYSKCGDLKDAWELFIQIPRKDVVCWNAMISGYA 340

Query: 490 LHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLA 549
            HG G +AL+LF EM   G++P  +TF++VL AC+HAGLV  G + F +M  D G +   
Sbjct: 341 QHGAGKKALRLFDEMKKEGLKPDWITFVAVLLACNHAGLVDLGVQYFNTMRRDFGIETKP 400

Query: 550 EHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFE 609
           EHYACMVD+LGRAG+L +A++ IK +  +P PA++G LLGAC IHK+ NLA  A++ L E
Sbjct: 401 EHYACMVDLLGRAGKLSEAVDLIKSMPFKPHPAIYGTLLGACRIHKNLNLAEFAAKNLLE 460

Query: 610 LDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQ 669
           LDP     +V L+N+Y+A+  +   A++R+ +K   + K PG + IE+    H F S D+
Sbjct: 461 LDPTIATGYVQLANVYAAQNRWDHVASIRRSMKDNNVVKIPGYSWIEINSVVHGFRSSDR 520

Query: 670 LHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIAT 729
           LHP+  +I+  L+ L  KM+ AG+  +    LHDV EE KE ++  HSEKLAIAFGL+  
Sbjct: 521 LHPELASIHEKLKDLEKKMKLAGYVPDLEFVLHDVGEELKEQLLLWHSEKLAIAFGLLKV 580

Query: 730 EPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
             G  IR+ KNLRVC DCH+ATK+IS + GR I+VRD  RFHHFK G CSC DYW
Sbjct: 581 PLGVPIRVFKNLRVCGDCHSATKYISTIEGREIIVRDTTRFHHFKDGFCSCRDYW 635



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 106/440 (24%), Positives = 182/440 (41%), Gaps = 74/440 (16%)

Query: 59  YARALFFSIPKPDLFLFNVII------------RGFSNNEMPKSSICFYTHL-------- 98
           YAR LF  IP+P+   +N+++            RGF ++ MP   +  +  +        
Sbjct: 91  YARQLFEKIPQPNTVSYNIMLACHWHHLGVHDARGFFDS-MPLKDVASWNTMISALAQVG 149

Query: 99  ------RKNTALTPDN-FTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVD 151
                 R  +A+   N  ++S ++S   AC D    V        +     +    A++ 
Sbjct: 150 LMGEARRLFSAMPEKNCVSWSAMVSGYVACGDLDAAV----ECFYAAPMRSVITWTAMIT 205

Query: 152 LYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDST 211
            Y KF  V+ A ++F +M  +  V WN+MI+G ++N   +D + +F  M+  G    ++ 
Sbjct: 206 GYMKFGRVELAERLFQEMSMRTLVTWNAMIAGYVENGRAEDGLRLFRTMLETGVK-PNAL 264

Query: 212 SVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDI 271
           S+ +VL   + +  L+LG ++  L  K          T LVS YSKCG+++ A  LF  I
Sbjct: 265 SLTSVLLGCSNLSALQLGKQVHQLVCKCPLSSDTTAGTSLVSMYSKCGDLKDAWELFIQI 324

Query: 272 VRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTN 331
            R D++  NAMISGY  +G  + +LRLF ++     + +  T V ++             
Sbjct: 325 PRKDVVCWNAMISGYAQHGAGKKALRLFDEMKKEGLKPDWITFVAVL------------- 371

Query: 332 CIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNG 391
                     +  N + L  L   Y   N M       D   E     +  M+    + G
Sbjct: 372 ----------LACNHAGLVDLGVQY--FNTMRR-----DFGIETKPEHYACMVDLLGRAG 414

Query: 392 LTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVST 451
              EA+ L + M      P+P    ++L AC     ++L     E       E +  ++T
Sbjct: 415 KLSEAVDLIKSM---PFKPHPAIYGTLLGACRIHKNLNLA----EFAAKNLLELDPTIAT 467

Query: 452 ALIDMYAKCGNIVEARELFD 471
                Y +  N+  A+  +D
Sbjct: 468 G----YVQLANVYAAQNRWD 483



 Score = 53.1 bits (126), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 48/179 (26%), Positives = 83/179 (46%), Gaps = 20/179 (11%)

Query: 428 ISLGKWVHELVKSRNFESN-IYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMIS 486
           ++L K+V        F +N +  S  LI  Y +CG+I  A  +F+ M  KS VTWN++++
Sbjct: 21  VTLSKYVSSHTHQHEFNNNNVIASNKLIASYVRCGDIDSAVRVFEDMKVKSTVTWNSILA 80

Query: 487 GYGLH-GHGLEALQLFSEMLHSGIRPSGVTFLSVLYAC--SHAGLVREGDEIFQSMIHDH 543
            +    GH   A QLF ++     +P+ V++ +++ AC   H G V +    F SM    
Sbjct: 81  AFAKKPGHFEYARQLFEKI----PQPNTVSY-NIMLACHWHHLG-VHDARGFFDSM---- 130

Query: 544 GFKPLAE--HYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLA 600
              PL +   +  M+  L + G + +A      +  E     W A++   +   D + A
Sbjct: 131 ---PLKDVASWNTMISALAQVGLMGEARRLFSAMP-EKNCVSWSAMVSGYVACGDLDAA 185


>gi|302807997|ref|XP_002985693.1| hypothetical protein SELMODRAFT_122934 [Selaginella moellendorffii]
 gi|300146602|gb|EFJ13271.1| hypothetical protein SELMODRAFT_122934 [Selaginella moellendorffii]
          Length = 706

 Score =  448 bits (1152), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 242/668 (36%), Positives = 375/668 (56%), Gaps = 10/668 (1%)

Query: 122 CDRSIGVLLHG---HAIVS--GYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVL 176
           C R +G L  G   H ++   G GSD++V   LV +Y K   ++ AR VF+  P K+   
Sbjct: 44  CAR-LGALAEGRRIHQLIRRVGLGSDVYVSNHLVMMYGKCGSLEEARLVFEATPAKNVFS 102

Query: 177 WNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLG 236
           W  +I+   ++   Q+++ +F +M++ G      +  AA+    A  + L  G  +  L 
Sbjct: 103 WTILITVCAQHGRSQEALALFYEMLKQGIQPHSVSFTAAINACSAGPEFLPAGRALHALL 162

Query: 237 LKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSL 296
            + GF D V   T LVS YSKCG +E +   F  +   + +S NAMI+ +  + +   +L
Sbjct: 163 RRYGFQDAVVATTSLVSMYSKCGSLEESVKTFESMTELNAVSWNAMIAAFAEHRRGLEAL 222

Query: 297 RLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVY 356
           R  +++     R  S T + L+  +     L     IH   L++G   +  V+  +  +Y
Sbjct: 223 RTLQKMFLEGIRACSVTYITLMSAYDQPSQLKSARYIHDCILRTGF--DQDVVNVILNMY 280

Query: 357 SRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVS 416
            +   ++ A  +F   S+  + +WN MIA Y+Q+G T EA+  ++ MQ   V P+  T  
Sbjct: 281 GKCGCLQDAEAMFKSMSQPDVIAWNTMIAAYSQHGHTSEALRFYELMQEEGVVPDDYTYV 340

Query: 417 SILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHK 476
           S++ ACA LG + +GK VH  +  R F+    ++ +L++MY KCG +  AR +FD  + K
Sbjct: 341 SVIDACATLGDMEVGKQVHRRLGDRAFQVT-ELANSLVNMYGKCGILDVARSIFDKTA-K 398

Query: 477 SEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIF 536
             VTWN MI  Y  H H  +A +LF  M   G  PS +TF+SVL AC++AGL  E    F
Sbjct: 399 GSVTWNAMIGAYAQHSHEQQAFELFLLMRLDGEEPSYITFMSVLSACANAGLPEEAHSYF 458

Query: 537 QSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKD 596
             M  DHG +P   HY CMV+ LG+AG+L  A   I+G+  EP    W + L  C  H D
Sbjct: 459 VCMQQDHGVRPGGGHYGCMVESLGKAGRLSDAEALIQGMPFEPDVLTWTSFLANCRSHGD 518

Query: 597 TNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIE 656
               + A++    +DPE    +V L+ I++   D+ +A+ +R+++  R + K  G ++I+
Sbjct: 519 MKRGKFAAKGAIRIDPEASTGYVALARIHADAGDFQEASRIRKLMLDRGIRKNAGRSIIK 578

Query: 657 VGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVH 716
           +G + + FT+GDQ +P+S  I+  L++L+ +M+ AG+  +     HDVE  +KE ++  H
Sbjct: 579 LGTSVYEFTAGDQSNPRSKEIFDELKRLDKEMKRAGYDPDMTHVAHDVEAGQKEPLLFAH 638

Query: 717 SEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGG 776
           SE+LAIAFG+I+T  GT +RI+KNLRVC DCH  TK  SK+T R I+VRD+NRFHHFK G
Sbjct: 639 SERLAIAFGIISTSQGTPLRIMKNLRVCGDCHAMTKLTSKITRREIIVRDSNRFHHFKNG 698

Query: 777 VCSCGDYW 784
            CSC D+W
Sbjct: 699 SCSCKDFW 706



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 115/413 (27%), Positives = 195/413 (47%), Gaps = 18/413 (4%)

Query: 216 VLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPD 275
           V+ + A +  L  G  I  L  ++G    VYV   LV  Y KCG +E A L+F      +
Sbjct: 40  VIQSCARLGALAEGRRIHQLIRRVGLGSDVYVSNHLVMMYGKCGSLEEARLVFEATPAKN 99

Query: 276 LISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLI------PVFYPFGHLHL 329
           + S   +I+    +G+++ +L LF ++L    + +S +    I      P F P G    
Sbjct: 100 VFSWTILITVCAQHGRSQEALALFYEMLKQGIQPHSVSFTAAINACSAGPEFLPAG---- 155

Query: 330 TNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQ 389
              +H+   + G        T+L ++YS+   +E + K F+  +E +  SWNAMIA + +
Sbjct: 156 -RALHALLRRYGFQDAVVATTSLVSMYSKCGSLEESVKTFESMTELNAVSWNAMIAAFAE 214

Query: 390 NGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYV 449
           +    EA+   Q+M    +    VT  +++SA  Q   +   +++H+ +    F+ +  V
Sbjct: 215 HRRGLEALRTLQKMFLEGIRACSVTYITLMSAYDQPSQLKSARYIHDCILRTGFDQD--V 272

Query: 450 STALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGI 509
              +++MY KCG + +A  +F  MS    + WNTMI+ Y  HGH  EAL+ +  M   G+
Sbjct: 273 VNVILNMYGKCGCLQDAEAMFKSMSQPDVIAWNTMIAAYSQHGHTSEALRFYELMQEEGV 332

Query: 510 RPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKAL 569
            P   T++SV+ AC+  G +  G ++ + +  D  F+ + E    +V++ G+ G L+ A 
Sbjct: 333 VPDDYTYVSVIDACATLGDMEVGKQVHRRL-GDRAFQ-VTELANSLVNMYGKCGILDVAR 390

Query: 570 EFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLS 622
                 A   G   W A++GA   H     A      L  LD E   Y   +S
Sbjct: 391 SIFDKTA--KGSVTWNAMIGAYAQHSHEQQA-FELFLLMRLDGEEPSYITFMS 440



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 89/384 (23%), Positives = 167/384 (43%), Gaps = 45/384 (11%)

Query: 12  FLSLLKGAKTQSQLTQT---HAQIIIHGFQNDLSTVTKLAHRLSDF-KATCY--ARALFF 65
           +++L+      SQL      H  I+  GF  D+  V      L+ + K  C   A A+F 
Sbjct: 240 YITLMSAYDQPSQLKSARYIHDCILRTGFDQDVVNVI-----LNMYGKCGCLQDAEAMFK 294

Query: 66  SIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRS 125
           S+ +PD+  +N +I  +S +     ++ FY  L +   + PD++TY  V+ A +   D  
Sbjct: 295 SMSQPDVIAWNTMIAAYSQHGHTSEALRFY-ELMQEEGVVPDDYTYVSVIDACATLGDME 353

Query: 126 IGVLLHGHAIVSGYGSDLF----VGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMI 181
           +G  +H        G   F    +  +LV++Y K   +  AR +FDK   K +V WN+MI
Sbjct: 354 VGKQVHRR-----LGDRAFQVTELANSLVNMYGKCGILDVARSIFDKTA-KGSVTWNAMI 407

Query: 182 SGLMKNCCFQDSIWVFGDMVRNGG-----TWLDSTSVAAVLPAVAEVQELRLGMEIQCLG 236
               ++   Q +  +F  M  +G      T++   S  A      E     + M+ Q  G
Sbjct: 408 GAYAQHSHEQQAFELFLLMRLDGEEPSYITFMSVLSACANAGLPEEAHSYFVCMQ-QDHG 466

Query: 237 LKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDI-VRPDLISCNAMISGYTCNGKTESS 295
           ++ G   +  ++  L     K G +  AE L + +   PD+++  + ++    N ++   
Sbjct: 467 VRPGGGHYGCMVESL----GKAGRLSDAEALIQGMPFEPDVLTWTSFLA----NCRSHGD 518

Query: 296 LRLFRQLLASAERVN---SSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNS--SVLT 350
           ++  +     A R++   S+  V L  +    G     + I    L  GI  N+  S++ 
Sbjct: 519 MKRGKFAAKGAIRIDPEASTGYVALARIHADAGDFQEASRIRKLMLDRGIRKNAGRSIIK 578

Query: 351 ALSTVYSRLNEMEA---ARKLFDE 371
             ++VY      ++   ++++FDE
Sbjct: 579 LGTSVYEFTAGDQSNPRSKEIFDE 602


>gi|125532805|gb|EAY79370.1| hypothetical protein OsI_34497 [Oryza sativa Indica Group]
          Length = 681

 Score =  447 bits (1151), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 223/576 (38%), Positives = 347/576 (60%), Gaps = 1/576 (0%)

Query: 209 DSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLF 268
           DST+    L A A + +LR G  ++      G+ D V+V + L+  Y++ G +  A  +F
Sbjct: 107 DSTTFTLALSACARLGDLRGGESVRDRAFDAGYKDDVFVCSSLLHLYARWGAMGDAVKVF 166

Query: 269 RDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLH 328
             + R D ++ + M++G+   G+   +++++R++     + +   ++G+I       ++ 
Sbjct: 167 DRMPRRDRVTWSTMVAGFVSAGQPLDAIQMYRRMREDGVKGDEVVMIGVIQACTAARNVR 226

Query: 329 LTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYT 388
           +   +H   L+ G+  +    T+L  +Y++   ++ A ++F     ++  SW+AMI+G+ 
Sbjct: 227 MGASVHGHLLRHGMRMDVVTATSLVDMYAKNGLLDVACRVFGLMVHRNDVSWSAMISGFA 286

Query: 389 QNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIY 448
           QNG ++EA+ LF+ MQAS + P+   + S L AC+ +G + LG+ VH  +  R F+ N  
Sbjct: 287 QNGQSDEALRLFRNMQASGIQPDSGALVSALLACSNIGFLKLGRSVHGFI-VRRFDFNCI 345

Query: 449 VSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSG 508
           + TA IDMY+KCG++  A+ LF+++S +  + WN MI+  G HG G +AL LF EM  +G
Sbjct: 346 LGTAAIDMYSKCGSLASAQMLFNMISDRDLILWNAMIACCGAHGRGQDALTLFQEMNETG 405

Query: 509 IRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKA 568
           +RP   TF S+L A SH+GLV EG   F  M++     P  +HY C+VD+L R+G +E+A
Sbjct: 406 MRPDHATFASLLSALSHSGLVEEGKLWFGCMVNHFKITPAEKHYVCLVDLLARSGLVEEA 465

Query: 569 LEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAE 628
            + +  +  EP  A+W ALL  C+ +K   L    ++ + EL P++VG   L+SN+Y+A 
Sbjct: 466 SDLLTSMKAEPTVAIWVALLSGCLNNKKLELGESIADNILELQPDDVGVLALVSNLYAAT 525

Query: 629 RDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKM 688
           + + +   VR+++K     K PGC+ IE+ GT H F   DQ HPQ   I + + KL+ +M
Sbjct: 526 KKWDKVRQVRKLMKDSGSKKMPGCSSIEIRGTRHAFLMEDQSHPQREEIVSKVAKLDLEM 585

Query: 689 REAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCH 748
           R+ G+   T    HD+EEE KE  +  HSEKLAIAFGL+ T PGT + IIKNLRVC DCH
Sbjct: 586 RKMGYIPRTEFVYHDLEEEVKEQQLSYHSEKLAIAFGLLNTGPGTRLVIIKNLRVCGDCH 645

Query: 749 TATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
            A K+ISK+  R IVVRDA RFHHFK GVCSC DYW
Sbjct: 646 DAIKYISKIADREIVVRDAKRFHHFKDGVCSCRDYW 681



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 123/389 (31%), Positives = 204/389 (52%), Gaps = 8/389 (2%)

Query: 103 ALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSA 162
           A  PD+ T++  LSA +   D   G  +   A  +GY  D+FV ++L+ LY ++  +  A
Sbjct: 103 AARPDSTTFTLALSACARLGDLRGGESVRDRAFDAGYKDDVFVCSSLLHLYARWGAMGDA 162

Query: 163 RKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAE 222
            KVFD+MP +D V W++M++G +      D+I ++  M R  G   D   +  V+ A   
Sbjct: 163 VKVFDRMPRRDRVTWSTMVAGFVSAGQPLDAIQMYRRM-REDGVKGDEVVMIGVIQACTA 221

Query: 223 VQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAM 282
            + +R+G  +    L+ G    V   T LV  Y+K G ++ A  +F  +V  + +S +AM
Sbjct: 222 ARNVRMGASVHGHLLRHGMRMDVVTATSLVDMYAKNGLLDVACRVFGLMVHRNDVSWSAM 281

Query: 283 ISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGI 342
           ISG+  NG+++ +LRLFR + AS  + +S  +V  +      G L L   +H F ++   
Sbjct: 282 ISGFAQNGQSDEALRLFRNMQASGIQPDSGALVSALLACSNIGFLKLGRSVHGFIVRR-F 340

Query: 343 VSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQE 402
             N  + TA   +YS+   + +A+ LF+  S++ L  WNAMIA    +G  ++A++LFQE
Sbjct: 341 DFNCILGTAAIDMYSKCGSLASAQMLFNMISDRDLILWNAMIACCGAHGRGQDALTLFQE 400

Query: 403 MQASKVAPNPVTVSSILSACAQLGAISLGK-WVHELVKSRNFESNIYVSTALIDMYAKCG 461
           M  + + P+  T +S+LSA +  G +  GK W   +V              L+D+ A+ G
Sbjct: 401 MNETGMRPDHATFASLLSALSHSGLVEEGKLWFGCMVNHFKITPAEKHYVCLVDLLARSG 460

Query: 462 NIVEARELFDLMSHKSEVT---WNTMISG 487
            + EA +L  L S K+E T   W  ++SG
Sbjct: 461 LVEEASDL--LTSMKAEPTVAIWVALLSG 487


>gi|356526561|ref|XP_003531885.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Glycine max]
          Length = 658

 Score =  447 bits (1151), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 234/578 (40%), Positives = 350/578 (60%), Gaps = 18/578 (3%)

Query: 219 AVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLIS 278
           + A+   L  G+++    +  GF    ++ T L++ Y + G ++RA  +F +     +  
Sbjct: 87  SCAQKNSLSYGLDVHRCLVDSGFDQDPFLATKLINMYYELGSIDRALKVFDETRERTIYV 146

Query: 279 CNAMISGYTCNGKTESSLRLFRQLL---ASAERVNSSTIVGLIPVFYPFGHLHLTNC--- 332
            NA+       G  +  L L+ Q+      ++R   + ++    V        L+ C   
Sbjct: 147 WNALFRALAMVGHGKELLDLYIQMNWIGTPSDRFTYTYVLKACVVS------ELSVCPLR 200

Query: 333 ----IHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYT 388
               IH+  L+ G  +N  V+T L  VY++   +  A  +F     K+  SW+AMIA + 
Sbjct: 201 KGKEIHAHILRHGYEANIHVMTTLLDVYAKFGSVSYANSVFCAMPTKNFVSWSAMIACFA 260

Query: 389 QNGLTEEAISLFQEM--QASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESN 446
           +N +  +A+ LFQ M  +A    PN VT+ ++L ACA L A+  GK +H  +  R  +S 
Sbjct: 261 KNEMPMKALELFQLMMFEACNSVPNSVTMVNMLQACAGLAALEQGKLIHGYILRRQLDSI 320

Query: 447 IYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLH 506
           + V  ALI MY +CG ++  + +FD M  +  V+WN++IS YG+HG G +A+Q+F  M+H
Sbjct: 321 LPVLNALITMYGRCGEVLMGQRVFDNMKKRDVVSWNSLISIYGMHGFGKKAIQIFENMIH 380

Query: 507 SGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLE 566
            G+ PS ++F++VL ACSHAGLV EG  +F+SM+  +   P  EHYACMVD+LGRA +L 
Sbjct: 381 QGVSPSYISFITVLGACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLG 440

Query: 567 KALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYS 626
           +A++ I+ +  EPGP VWG+LLG+C IH +  LA  AS  LFEL+P N G +VLL++IY+
Sbjct: 441 EAIKLIEDMHFEPGPTVWGSLLGSCRIHCNVELAERASTVLFELEPRNAGNYVLLADIYA 500

Query: 627 AERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNG 686
             + + +A +V ++++ R L K PGC+ IEV    + F S D+ +PQ   I+A+L KL+ 
Sbjct: 501 EAKLWSEAKSVMKLLEARGLQKLPGCSWIEVKRKVYSFVSVDEHNPQIEEIHALLVKLSN 560

Query: 687 KMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLD 746
           +M+  G+  +T   L+D++EEEKE ++  HSEKLA+AFGLI T  G  IRI KNLR+C D
Sbjct: 561 EMKAQGYVPQTNVVLYDLDEEEKERIVLGHSEKLAVAFGLINTAKGETIRIRKNLRLCED 620

Query: 747 CHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           CH  TKFISK   R I+VRD NRFHHF+ GVCSCGDYW
Sbjct: 621 CHAVTKFISKFANREILVRDVNRFHHFRDGVCSCGDYW 658



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 110/429 (25%), Positives = 207/429 (48%), Gaps = 14/429 (3%)

Query: 76  NVIIRGFSNNEMPKSSICFYTHLRKNTAL-----TPDNFTYSFVLSAASACCDRSIGVLL 130
           N+I    SNN     S+C   +L++   L      P   T+  ++ + +     S G+ +
Sbjct: 41  NLINDINSNNNQLIQSLCKGGNLKQALHLLCCEPNPTQQTFEHLIYSCAQKNSLSYGLDV 100

Query: 131 HGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCF 190
           H   + SG+  D F+   L+++Y++   +  A KVFD+  E+   +WN++   L      
Sbjct: 101 HRCLVDSGFDQDPFLATKLINMYYELGSIDRALKVFDETRERTIYVWNALFRALAMVGHG 160

Query: 191 QDSIWVFGDMVRNGGTWLDSTSVAAVLPA--VAE--VQELRLGMEIQCLGLKLGFHDHVY 246
           ++ + ++  M    GT  D  +   VL A  V+E  V  LR G EI    L+ G+  +++
Sbjct: 161 KELLDLYIQM-NWIGTPSDRFTYTYVLKACVVSELSVCPLRKGKEIHAHILRHGYEANIH 219

Query: 247 VLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLL--A 304
           V+T L+  Y+K G V  A  +F  +   + +S +AMI+ +  N     +L LF+ ++  A
Sbjct: 220 VMTTLLDVYAKFGSVSYANSVFCAMPTKNFVSWSAMIACFAKNEMPMKALELFQLMMFEA 279

Query: 305 SAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEA 364
                NS T+V ++        L     IH + L+  + S   VL AL T+Y R  E+  
Sbjct: 280 CNSVPNSVTMVNMLQACAGLAALEQGKLIHGYILRRQLDSILPVLNALITMYGRCGEVLM 339

Query: 365 ARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQ 424
            +++FD   ++ + SWN++I+ Y  +G  ++AI +F+ M    V+P+ ++  ++L AC+ 
Sbjct: 340 GQRVFDNMKKRDVVSWNSLISIYGMHGFGKKAIQIFENMIHQGVSPSYISFITVLGACSH 399

Query: 425 LGAISLGKWVHELVKSR-NFESNIYVSTALIDMYAKCGNIVEARELF-DLMSHKSEVTWN 482
            G +  GK + E + S+      +     ++D+  +   + EA +L  D+        W 
Sbjct: 400 AGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLGEAIKLIEDMHFEPGPTVWG 459

Query: 483 TMISGYGLH 491
           +++    +H
Sbjct: 460 SLLGSCRIH 468



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 105/439 (23%), Positives = 197/439 (44%), Gaps = 39/439 (8%)

Query: 28  THAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNEM 87
            H  ++  GF  D    TKL +   +  +   A  +F    +  ++++N + R  +    
Sbjct: 100 VHRCLVDSGFDQDPFLATKLINMYYELGSIDRALKVFDETRERTIYVWNALFRALAMVGH 159

Query: 88  PKSSICFYTHLRKNTALTP-DNFTYSFVLSAAS----ACCDRSIGVLLHGHAIVSGYGSD 142
            K  +  Y  +  N   TP D FTY++VL A      + C    G  +H H +  GY ++
Sbjct: 160 GKELLDLYIQM--NWIGTPSDRFTYTYVLKACVVSELSVCPLRKGKEIHAHILRHGYEAN 217

Query: 143 LFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVR 202
           + V   L+D+Y KF  V  A  VF  MP K+ V W++MI+   KN     ++ +F  M+ 
Sbjct: 218 IHVMTTLLDVYAKFGSVSYANSVFCAMPTKNFVSWSAMIACFAKNEMPMKALELFQLMMF 277

Query: 203 NG-GTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEV 261
               +  +S ++  +L A A +  L  G  I    L+      + VL  L++ Y +CGEV
Sbjct: 278 EACNSVPNSVTMVNMLQACAGLAALEQGKLIHGYILRRQLDSILPVLNALITMYGRCGEV 337

Query: 262 ERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVF 321
              + +F ++ + D++S N++IS Y  +G  + ++++F  ++            G+ P +
Sbjct: 338 LMGQRVFDNMKKRDVVSWNSLISIYGMHGFGKKAIQIFENMIHQ----------GVSPSY 387

Query: 322 YPFGHLHLTNCIHSFCLKSGIVSNSSVLT------------ALSTVYSRLNEMEAARKLF 369
             F  + L  C H+  ++ G +   S+L+             +  +  R N +  A KL 
Sbjct: 388 ISFITV-LGACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLGEAIKLI 446

Query: 370 DESS-EKSLASWNAMIAG---YTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQL 425
           ++   E     W +++     +    L E A ++  E++  + A N V ++ I    A+ 
Sbjct: 447 EDMHFEPGPTVWGSLLGSCRIHCNVELAERASTVLFELEP-RNAGNYVLLADIY---AEA 502

Query: 426 GAISLGKWVHELVKSRNFE 444
              S  K V +L+++R  +
Sbjct: 503 KLWSEAKSVMKLLEARGLQ 521



 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 57/209 (27%), Positives = 104/209 (49%), Gaps = 10/209 (4%)

Query: 5   TPQSRNLFLSLLKGAKTQSQLT--------QTHAQIIIHGFQNDLSTVTKLAHRLSDFKA 56
           TP  R  +  +LK A   S+L+        + HA I+ HG++ ++  +T L    + F +
Sbjct: 175 TPSDRFTYTYVLK-ACVVSELSVCPLRKGKEIHAHILRHGYEANIHVMTTLLDVYAKFGS 233

Query: 57  TCYARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSI-CFYTHLRKNTALTPDNFTYSFVL 115
             YA ++F ++P  +   ++ +I  F+ NEMP  ++  F   + +     P++ T   +L
Sbjct: 234 VSYANSVFCAMPTKNFVSWSAMIACFAKNEMPMKALELFQLMMFEACNSVPNSVTMVNML 293

Query: 116 SAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTV 175
            A +       G L+HG+ +     S L V  AL+ +Y +   V   ++VFD M ++D V
Sbjct: 294 QACAGLAALEQGKLIHGYILRRQLDSILPVLNALITMYGRCGEVLMGQRVFDNMKKRDVV 353

Query: 176 LWNSMISGLMKNCCFQDSIWVFGDMVRNG 204
            WNS+IS    +   + +I +F +M+  G
Sbjct: 354 SWNSLISIYGMHGFGKKAIQIFENMIHQG 382



 Score = 76.3 bits (186), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 53/194 (27%), Positives = 92/194 (47%), Gaps = 13/194 (6%)

Query: 381 NAMIAGYTQNGLTEEAISLFQEMQASKVAPNPV--TVSSILSACAQLGAISLGKWVHELV 438
           N +I    + G  ++A+ L          PNP   T   ++ +CAQ  ++S G  VH  +
Sbjct: 51  NQLIQSLCKGGNLKQALHLLC------CEPNPTQQTFEHLIYSCAQKNSLSYGLDVHRCL 104

Query: 439 KSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEAL 498
               F+ + +++T LI+MY + G+I  A ++FD    ++   WN +     + GHG E L
Sbjct: 105 VDSGFDQDPFLATKLINMYYELGSIDRALKVFDETRERTIYVWNALFRALAMVGHGKELL 164

Query: 499 QLFSEMLHSGIRPSGVTFLSVLYACSHAGL----VREGDEIFQSMIHDHGFKPLAEHYAC 554
            L+ +M   G      T+  VL AC  + L    +R+G EI  + I  HG++        
Sbjct: 165 DLYIQMNWIGTPSDRFTYTYVLKACVVSELSVCPLRKGKEI-HAHILRHGYEANIHVMTT 223

Query: 555 MVDILGRAGQLEKA 568
           ++D+  + G +  A
Sbjct: 224 LLDVYAKFGSVSYA 237


>gi|224143620|ref|XP_002325018.1| predicted protein [Populus trichocarpa]
 gi|222866452|gb|EEF03583.1| predicted protein [Populus trichocarpa]
          Length = 695

 Score =  447 bits (1151), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 243/644 (37%), Positives = 359/644 (55%), Gaps = 37/644 (5%)

Query: 142 DLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMV 201
           D F   A++ LY K   V+  R +FD MP +D+V +N++ISG   N     ++ VF  M 
Sbjct: 88  DNFSWNAMLSLYAKSGLVEDLRVIFDNMPSRDSVSYNTVISGFAGNGRGGPALGVFLRMQ 147

Query: 202 RNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEV 261
           + G    + T V+ VL A  ++ +LR G +I    +      +V+V   L   Y++CGE+
Sbjct: 148 KEGLKPTEYTHVS-VLNACTQLLDLRRGKQIHGRIIICNLGGNVFVCNALTDLYARCGEI 206

Query: 262 ERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVF 321
           ++A  LF  +V  ++++ N MISGY  N + E  + LF ++  S                
Sbjct: 207 DQARRLFDRMVIRNVVTWNLMISGYLKNRQPEKCIDLFHEMQVSN--------------- 251

Query: 322 YPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWN 381
                           LK   V+ SSVL A    Y +   ++ ARK+F E  EK    W 
Sbjct: 252 ----------------LKPDQVTASSVLGA----YIQAGYIDEARKVFGEIREKDEVCWT 291

Query: 382 AMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSR 441
            MI G  QNG  E+A+ LF EM      P+  T+SS++S+CA+L ++  G+ VH      
Sbjct: 292 IMIVGCAQNGKEEDALLLFSEMLLENARPDGYTISSVVSSCAKLASLYHGQVVHGKAFLM 351

Query: 442 NFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLF 501
               ++ VS+AL+DMY KCG   +A  +F  M  ++ V+WN+MI GY L+G  LEAL L+
Sbjct: 352 GVNDDLLVSSALVDMYCKCGVTRDAWTIFSTMQTRNVVSWNSMIGGYALNGQDLEALSLY 411

Query: 502 SEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGR 561
             ML   ++P  VTF+ VL AC HAGLV EG E F SM   HG +P  +HYACMV++ GR
Sbjct: 412 ENMLEENLKPDSVTFVGVLSACVHAGLVEEGKEYFCSMSDQHGLEPTPDHYACMVNLFGR 471

Query: 562 AGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLL 621
           +G ++KA++ I  ++ EP   +W  +L  C++  D     +A+  L EL+P N   +++L
Sbjct: 472 SGHMDKAVDLISSMSQEPNSLIWTTVLSVCVMKGDIKHGEMAARCLIELNPFNAVPYIML 531

Query: 622 SNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAML 681
           SN+Y+A   +   A++R ++K + + K    + IE+    H F + D+ HP +  I+  L
Sbjct: 532 SNMYAARGRWKDVASIRSLMKSKHVKKFSAYSWIEIDNEVHKFVADDRTHPDAKIIHVQL 591

Query: 682 EKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPG-TEIRIIKN 740
            +L  K++EAGF   T   LHD  E+EK   +  HSEKLA+A+GLI    G T IRIIKN
Sbjct: 592 NRLIRKLQEAGFSPNTNLVLHDFGEDEKLESINYHSEKLALAYGLIKKPHGVTPIRIIKN 651

Query: 741 LRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           +R C DCH   KF+S +T R +++RD+NRFHHF  G CSC DYW
Sbjct: 652 IRTCADCHIFMKFVSNITRRPVILRDSNRFHHFVEGKCSCKDYW 695



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 117/449 (26%), Positives = 202/449 (44%), Gaps = 42/449 (9%)

Query: 61  RALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASA 120
           R +F ++P  D   +N +I GF+ N     ++  +  ++K   L P  +T+  VL+A + 
Sbjct: 109 RVIFDNMPSRDSVSYNTVISGFAGNGRGGPALGVFLRMQKE-GLKPTEYTHVSVLNACTQ 167

Query: 121 CCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSM 180
             D   G  +HG  I+   G ++FV  AL DLY +   +  AR++FD+M  ++ V WN M
Sbjct: 168 LLDLRRGKQIHGRIIICNLGGNVFVCNALTDLYARCGEIDQARRLFDRMVIRNVVTWNLM 227

Query: 181 ISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLG 240
           ISG +KN   +  I +F +M +      D  + ++VL A                     
Sbjct: 228 ISGYLKNRQPEKCIDLFHEM-QVSNLKPDQVTASSVLGA--------------------- 265

Query: 241 FHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFR 300
                         Y + G ++ A  +F +I   D +    MI G   NGK E +L LF 
Sbjct: 266 --------------YIQAGYIDEARKVFGEIREKDEVCWTIMIVGCAQNGKEEDALLLFS 311

Query: 301 QLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLN 360
           ++L    R +  TI  ++        L+    +H      G+  +  V +AL  +Y +  
Sbjct: 312 EMLLENARPDGYTISSVVSSCAKLASLYHGQVVHGKAFLMGVNDDLLVSSALVDMYCKCG 371

Query: 361 EMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILS 420
               A  +F     +++ SWN+MI GY  NG   EA+SL++ M    + P+ VT   +LS
Sbjct: 372 VTRDAWTIFSTMQTRNVVSWNSMIGGYALNGQDLEALSLYENMLEENLKPDSVTFVGVLS 431

Query: 421 ACAQLGAISLGK-WVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHK-SE 478
           AC   G +  GK +   +      E        +++++ + G++ +A +L   MS + + 
Sbjct: 432 ACVHAGLVEEGKEYFCSMSDQHGLEPTPDHYACMVNLFGRSGHMDKAVDLISSMSQEPNS 491

Query: 479 VTWNTMISGYGLHG---HGLEALQLFSEM 504
           + W T++S   + G   HG  A +   E+
Sbjct: 492 LIWTTVLSVCVMKGDIKHGEMAARCLIEL 520


>gi|12039323|gb|AAG46111.1|AC073166_9 hypothetical protein [Oryza sativa Japonica Group]
          Length = 787

 Score =  447 bits (1151), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 223/576 (38%), Positives = 348/576 (60%), Gaps = 1/576 (0%)

Query: 209 DSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLF 268
           DST+    L A A + +LR G  ++      G+ D V+V + L+  Y++ G +  A  +F
Sbjct: 107 DSTTFTLALSACARLGDLRGGESVRDRAFDAGYKDDVFVCSSLLHLYARWGAMGDAVKVF 166

Query: 269 RDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLH 328
             + R D ++ + M++G+   G+   +++++R++     + +   ++G+I       ++ 
Sbjct: 167 VRMPRRDRVTWSTMVAGFVSAGQPLDAIQMYRRMREDGVKGDEVVMIGVIQACTAARNVR 226

Query: 329 LTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYT 388
           +   +H   L+ G+  +    T+L  +Y++   ++ A ++F     ++  SW+AMI+G+ 
Sbjct: 227 MGASVHGHLLRHGMRMDVVTATSLVDMYAKNGLLDVACRVFGLMVHRNDVSWSAMISGFA 286

Query: 389 QNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIY 448
           QNG ++EA+ LF+ MQAS + P+   + S L AC+ +G + LG+ VH  +  R F+ N  
Sbjct: 287 QNGQSDEALRLFRNMQASGIQPDSGALVSALLACSNIGFLKLGRSVHGFI-VRRFDFNCI 345

Query: 449 VSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSG 508
           + TA IDMY+KCG++  A+ LF+++S +  + WN MI+  G HG G +AL LF EM  +G
Sbjct: 346 LGTAAIDMYSKCGSLASAQMLFNMISDRDLILWNAMIACCGAHGRGQDALTLFQEMNETG 405

Query: 509 IRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKA 568
           +RP   TF S+L A SH+GLV EG   F  M++     P  +HY C+VD+L R+G +E+A
Sbjct: 406 MRPDHATFASLLSALSHSGLVEEGKLWFGRMVNHFKITPAEKHYVCLVDLLARSGLVEEA 465

Query: 569 LEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAE 628
            + +  +  EP  A+W ALL  C+ +K   L    ++ + EL P++VG   L+SN+Y+A 
Sbjct: 466 SDLLTSMKAEPTVAIWVALLSGCLNNKKLELGESIADNILELQPDDVGVLALVSNLYAAT 525

Query: 629 RDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKM 688
           + + +   VR+++K     K PGC+ IE+ GT HVF   DQ HPQ   I + + KL+ +M
Sbjct: 526 KKWDKVRQVRKLMKDSGSKKMPGCSSIEIRGTRHVFVMEDQSHPQREEIVSKVAKLDLEM 585

Query: 689 REAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCH 748
           R+ G+   T    HD+EEE KE  +  HSE+LAIAFGL+ T PGT + IIKNLRVC DCH
Sbjct: 586 RKMGYIPRTEFVYHDLEEEVKEQQLSYHSERLAIAFGLLNTGPGTRLVIIKNLRVCGDCH 645

Query: 749 TATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
            A K+ISK+  R IVVRDA RFHHFK GVCSC DYW
Sbjct: 646 DAIKYISKIADREIVVRDAKRFHHFKDGVCSCRDYW 681



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 126/409 (30%), Positives = 210/409 (51%), Gaps = 10/409 (2%)

Query: 83  SNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSD 142
           S    P S++  +  L    A  PD+ T++  LSA +   D   G  +   A  +GY  D
Sbjct: 85  SRRGSPASALRVFRAL--PPAARPDSTTFTLALSACARLGDLRGGESVRDRAFDAGYKDD 142

Query: 143 LFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVR 202
           +FV ++L+ LY ++  +  A KVF +MP +D V W++M++G +      D+I ++  M R
Sbjct: 143 VFVCSSLLHLYARWGAMGDAVKVFVRMPRRDRVTWSTMVAGFVSAGQPLDAIQMYRRM-R 201

Query: 203 NGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVE 262
             G   D   +  V+ A    + +R+G  +    L+ G    V   T LV  Y+K G ++
Sbjct: 202 EDGVKGDEVVMIGVIQACTAARNVRMGASVHGHLLRHGMRMDVVTATSLVDMYAKNGLLD 261

Query: 263 RAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFY 322
            A  +F  +V  + +S +AMISG+  NG+++ +LRLFR + AS  + +S  +V  +    
Sbjct: 262 VACRVFGLMVHRNDVSWSAMISGFAQNGQSDEALRLFRNMQASGIQPDSGALVSALLACS 321

Query: 323 PFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNA 382
             G L L   +H F ++     N  + TA   +YS+   + +A+ LF+  S++ L  WNA
Sbjct: 322 NIGFLKLGRSVHGFIVRR-FDFNCILGTAAIDMYSKCGSLASAQMLFNMISDRDLILWNA 380

Query: 383 MIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGK-WVHELVKSR 441
           MIA    +G  ++A++LFQEM  + + P+  T +S+LSA +  G +  GK W   +V   
Sbjct: 381 MIACCGAHGRGQDALTLFQEMNETGMRPDHATFASLLSALSHSGLVEEGKLWFGRMVNHF 440

Query: 442 NFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVT---WNTMISG 487
                      L+D+ A+ G + EA +L  L S K+E T   W  ++SG
Sbjct: 441 KITPAEKHYVCLVDLLARSGLVEEASDL--LTSMKAEPTVAIWVALLSG 487


>gi|302763761|ref|XP_002965302.1| hypothetical protein SELMODRAFT_83034 [Selaginella moellendorffii]
 gi|300167535|gb|EFJ34140.1| hypothetical protein SELMODRAFT_83034 [Selaginella moellendorffii]
          Length = 600

 Score =  447 bits (1150), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 224/571 (39%), Positives = 340/571 (59%), Gaps = 2/571 (0%)

Query: 216 VLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRP- 274
           +L   A+ + L  G  +    +K G+     +   L+  Y KCG +  A  +F  I    
Sbjct: 30  LLKKCADSKALLEGKRVHSCLVKDGYASDRLIANLLIEMYGKCGGIAEARSVFDQIQEKN 89

Query: 275 -DLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCI 333
            D+IS N +I  YT NG  + +L LF+ +       N  T++  I              +
Sbjct: 90  ADVISWNGIIGAYTQNGLGKEALHLFKTMDLEGVIANQVTLINAIDACASLPSEEEGRIV 149

Query: 334 HSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLT 393
           H+  +   + S++ V T+L  ++ +   ++AAR +FD    K+L +WN M+A Y+QN   
Sbjct: 150 HAIAVDKRLESDTMVGTSLVNMFGKCKNVDAARAVFDSLPRKNLVTWNNMVAVYSQNWQC 209

Query: 394 EEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTAL 453
           ++AI +F+ M    V P+ VT  +I+ ACA L A + G+ VH+ + +     ++ + TA+
Sbjct: 210 KKAIQVFRFMDLEGVQPDAVTFLTIIDACAALAAHTEGRMVHDDITASGIPMDVALGTAV 269

Query: 454 IDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSG 513
           +  Y KCG +  AR +FD +  K+ VTW+ +++ Y  +G+  EA++L+ EM+  G+  +G
Sbjct: 270 MHFYGKCGRLDNARAIFDSLGKKNTVTWSAILAAYAQNGYETEAIELYHEMVQGGLEVNG 329

Query: 514 VTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIK 573
           +TFL +L+ACSHAG   +G + F SMI D G  P+ EHY  ++D+LGR+GQL+ + + I 
Sbjct: 330 ITFLGLLFACSHAGRSMDGVDYFVSMIRDFGVVPVFEHYLNLIDLLGRSGQLQLSEDLIN 389

Query: 574 GLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQ 633
            +  EP  + W ALLGAC +H D +     +E ++ELDPE+ G ++LLSN+YS+     +
Sbjct: 390 SMPYEPDSSAWLALLGACRMHGDVDRGARIAELIYELDPEDSGPYILLSNLYSSTGRMDE 449

Query: 634 AATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGF 693
           A   R+ ++ R + K PG + IEV    H F +  +LHPQ   I+A +E+L  +++EAG+
Sbjct: 450 ARRTRKAMRLRGITKQPGLSSIEVKDRVHEFMAAQKLHPQLGRIHAEIERLKARVKEAGY 509

Query: 694 QTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKF 753
             +    L DVEEEEKE ++  HSE+LAIAFGLI+T PGT + I+KNLRVC DCH A K 
Sbjct: 510 VADVRAVLRDVEEEEKEQLLWYHSERLAIAFGLISTPPGTALHIVKNLRVCFDCHAAVKA 569

Query: 754 ISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           ISKV GR IVVRDA RFHHF+ G CSCGDYW
Sbjct: 570 ISKVVGRKIVVRDAIRFHHFENGACSCGDYW 600



 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 76/313 (24%), Positives = 142/313 (45%), Gaps = 10/313 (3%)

Query: 11  LFLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKP 70
           L L     +K   +  + H+ ++  G+ +D      L            AR++F  I + 
Sbjct: 29  LLLKKCADSKALLEGKRVHSCLVKDGYASDRLIANLLIEMYGKCGGIAEARSVFDQIQEK 88

Query: 71  --DLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCD---RS 125
             D+  +N II  ++ N + K ++    HL K   L         +++A  AC       
Sbjct: 89  NADVISWNGIIGAYTQNGLGKEAL----HLFKTMDLEGVIANQVTLINAIDACASLPSEE 144

Query: 126 IGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLM 185
            G ++H  A+     SD  VG +LV+++ K   V +AR VFD +P K+ V WN+M++   
Sbjct: 145 EGRIVHAIAVDKRLESDTMVGTSLVNMFGKCKNVDAARAVFDSLPRKNLVTWNNMVAVYS 204

Query: 186 KNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHV 245
           +N   + +I VF  M    G   D+ +   ++ A A +     G  +       G    V
Sbjct: 205 QNWQCKKAIQVFRFMDLE-GVQPDAVTFLTIIDACAALAAHTEGRMVHDDITASGIPMDV 263

Query: 246 YVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLAS 305
            + T ++ FY KCG ++ A  +F  + + + ++ +A+++ Y  NG    ++ L+ +++  
Sbjct: 264 ALGTAVMHFYGKCGRLDNARAIFDSLGKKNTVTWSAILAAYAQNGYETEAIELYHEMVQG 323

Query: 306 AERVNSSTIVGLI 318
              VN  T +GL+
Sbjct: 324 GLEVNGITFLGLL 336



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 74/347 (21%), Positives = 156/347 (44%), Gaps = 15/347 (4%)

Query: 28  THAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNEM 87
            HA  +    ++D    T L +     K    ARA+F S+P+ +L  +N ++  +S N  
Sbjct: 149 VHAIAVDKRLESDTMVGTSLVNMFGKCKNVDAARAVFDSLPRKNLVTWNNMVAVYSQNWQ 208

Query: 88  PKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGA 147
            K +I  +  +     + PD  T+  ++ A +A    + G ++H     SG   D+ +G 
Sbjct: 209 CKKAIQVFRFMDLE-GVQPDAVTFLTIIDACAALAAHTEGRMVHDDITASGIPMDVALGT 267

Query: 148 ALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTW 207
           A++  Y K   + +AR +FD + +K+TV W+++++   +N    ++I ++ +MV+ GG  
Sbjct: 268 AVMHFYGKCGRLDNARAIFDSLGKKNTVTWSAILAAYAQNGYETEAIELYHEMVQ-GGLE 326

Query: 208 LDSTSVAAVLPAVAEVQELRLGME-----IQCLGLKLGFHDHVYVLTGLVSFYSKCGEVE 262
           ++  +   +L A +       G++     I+  G+   F  ++     L+    + G+++
Sbjct: 327 VNGITFLGLLFACSHAGRSMDGVDYFVSMIRDFGVVPVFEHYL----NLIDLLGRSGQLQ 382

Query: 263 RAELLFRDI-VRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVF 321
            +E L   +   PD  +  A++     +G  +   R+  +L+   +  +S   + L  ++
Sbjct: 383 LSEDLINSMPYEPDSSAWLALLGACRMHGDVDRGARI-AELIYELDPEDSGPYILLSNLY 441

Query: 322 YPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKL 368
              G +             GI     + +    V  R++E  AA+KL
Sbjct: 442 SSTGRMDEARRTRKAMRLRGITKQPGLSSI--EVKDRVHEFMAAQKL 486


>gi|296085026|emb|CBI28441.3| unnamed protein product [Vitis vinifera]
          Length = 913

 Score =  447 bits (1150), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 280/827 (33%), Positives = 441/827 (53%), Gaps = 61/827 (7%)

Query: 8   SRNLFLSLL---KGAKTQSQLTQTHAQIIIHGFQNDL---STVTKLAHRLSDFKATCYAR 61
           S   F SL+   +G+    +  + H Q I +GF  +L   +T+  +  R+ D  +   A+
Sbjct: 98  SSETFESLINRYQGSCCSEEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGS---AQ 154

Query: 62  ALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVL-----S 116
            LF  +   +L  +  +I G++ N  P  +   +  + +     P+++ +   L     S
Sbjct: 155 KLFDEMSNRNLVTWACLISGYTQNGKPDEACARFRDMVR-AGFIPNHYAFGSALRACQES 213

Query: 117 AASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFK-FSWVKSARKVFDKMPEKDTV 175
             S C    +GV +HG    + YGSD+ V   L+ +Y         AR VFD +  ++++
Sbjct: 214 GPSGC---KLGVQIHGLISKTRYGSDVVVCNVLISMYGSCLDSANDARSVFDGIGIRNSI 270

Query: 176 LWNSMISGLMKNCCFQDSIWVFGDMVRNG-GTWLDSTSVAAVLPAVAEVQELRLGMEIQC 234
            WNS+IS   +      +  +F  M + G G         +    + E +  R G E+  
Sbjct: 271 SWNSIISVYSRRGDAVSAYDLFSSMQKEGLGFSFKPNDAFSEFSVLEEGR--RKGREVHA 328

Query: 235 LGLKLGFHDH-VYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTE 293
             ++ G +D+ V +  GLV+ Y+K G +  A  +F  +V  D +S N++ISG   N  +E
Sbjct: 329 HVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSE 388

Query: 294 SSLRLFRQLLASAERVNSSTIVG------------------------------LIPVFYP 323
            +  +F  L+   ++V+ ++++G                               I +   
Sbjct: 389 DAAEMF-SLMPEYDQVSWNSVIGALSDSEASVSQAVKYFLQMMRGGWGLSRVTFINILSA 447

Query: 324 FGHLHL---TNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSE-KSLAS 379
              L L   ++ IH+  LK  +  ++++  AL + Y +  EM    K+F   SE +   S
Sbjct: 448 VSSLSLHEVSHQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVS 507

Query: 380 WNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVK 439
           WN+MI+GY  N L  +A+ L   M       +  T ++ILSACA +  +  G  VH    
Sbjct: 508 WNSMISGYIHNELLHKAMDLVWFMMQKGQRLDSFTFATILSACASVATLERGMEVHACGI 567

Query: 440 SRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQ 499
               ES++ V +AL+DMY+KCG I  A   F+LM  ++  +WN+MISGY  HGHG +AL+
Sbjct: 568 RACLESDVVVGSALVDMYSKCGRIDYASRFFELMPLRNVYSWNSMISGYARHGHGEKALK 627

Query: 500 LFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDIL 559
           LF+ M+  G  P  VTF+ VL ACSH G V EG E F+SM   +   P  EH++CMVD+L
Sbjct: 628 LFTRMMLDGQPPDHVTFVGVLSACSHVGFVEEGFEHFKSMSEVYRLSPRVEHFSCMVDLL 687

Query: 560 GRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIH--KDTNLARVASEKLFELDPENVGY 617
           GRAG+L++  +FI  + ++P   +W  +LGAC     ++T L R A+E L EL+P+N   
Sbjct: 688 GRAGKLDEVGDFINSMPMKPNVLIWRTVLGACCRANGRNTELGRRAAEMLLELEPQNAVN 747

Query: 618 HVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAI 677
           +VLL+N+Y++   +   A  R  +K+  + K  GC+ + +    HVF +GD+LHP+   I
Sbjct: 748 YVLLANMYASGEKWEDVAKARTAMKEAAVKKEAGCSWVTMKDGVHVFVAGDKLHPEKDLI 807

Query: 678 YAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRI 737
           Y  L +LN KMR+AG+  +T  AL D+E E KE ++  HSEK+A+AF ++  +    IRI
Sbjct: 808 YDKLRELNRKMRDAGYIPQTKYALFDLELENKEELLSYHSEKIAVAF-VLTRQSALPIRI 866

Query: 738 IKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           +KNLRVC DCH+A  +ISK+ GR IV+RD+NRFHHF+ G CSCGDYW
Sbjct: 867 MKNLRVCGDCHSAFGYISKIVGRQIVLRDSNRFHHFEDGKCSCGDYW 913



 Score =  143 bits (361), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 143/561 (25%), Positives = 245/561 (43%), Gaps = 64/561 (11%)

Query: 64  FFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRK-----NTALTPDNFTYSFVLSAA 118
           F + P P L   +++ +  + N+  KS      H +      NT L   + T+  +++  
Sbjct: 52  FTASPFPPLK--SLLFKPLNPNQCTKSLQDLVDHYKTSTSHCNTTLFSSSETFESLINRY 109

Query: 119 SACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWN 178
              C       LH  +I  G+  +LF+   L+++Y +   + SA+K+FD+M  ++ V W 
Sbjct: 110 QGSCCSEEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWA 169

Query: 179 SMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEV--QELRLGMEIQCLG 236
            +ISG  +N    ++   F DMVR  G   +  +  + L A  E      +LG++I  L 
Sbjct: 170 CLISGYTQNGKPDEACARFRDMVR-AGFIPNHYAFGSALRACQESGPSGCKLGVQIHGLI 228

Query: 237 LKLGFHDHVYVLTGLVSFYSKC-GEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESS 295
            K  +   V V   L+S Y  C      A  +F  I   + IS N++IS Y+  G   S+
Sbjct: 229 SKTRYGSDVVVCNVLISMYGSCLDSANDARSVFDGIGIRNSISWNSIISVYSRRGDAVSA 288

Query: 296 LRLFRQLLASAERVNSSTIVGLIPVFYPFGHL----HLTNCIHSFCLKSGIVSNS-SVLT 350
             LF    +S ++            F  F  L         +H+  +++G+  N  ++  
Sbjct: 289 YDLF----SSMQKEGLGFSFKPNDAFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGN 344

Query: 351 ALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEM-QASKVA 409
            L  +Y++   +  A  +F+   EK   SWN++I+G  QN  +E+A  +F  M +  +V+
Sbjct: 345 GLVNMYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAEMFSLMPEYDQVS 404

Query: 410 PNP-------------------------------VTVSSILSACAQLGAISLGKWVHELV 438
            N                                VT  +ILSA + L    +   +H LV
Sbjct: 405 WNSVIGALSDSEASVSQAVKYFLQMMRGGWGLSRVTFINILSAVSSLSLHEVSHQIHALV 464

Query: 439 KSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSH-KSEVTWNTMISGYGLHGHGL-E 496
                  +  +  AL+  Y KCG + E  ++F  MS  + EV+WN+MISGY +H   L +
Sbjct: 465 LKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISGY-IHNELLHK 523

Query: 497 ALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHY---- 552
           A+ L   M+  G R    TF ++L AC+    +  G E     +H  G +   E      
Sbjct: 524 AMDLVWFMMQKGQRLDSFTFATILSACASVATLERGME-----VHACGIRACLESDVVVG 578

Query: 553 ACMVDILGRAGQLEKALEFIK 573
           + +VD+  + G+++ A  F +
Sbjct: 579 SALVDMYSKCGRIDYASRFFE 599


>gi|297807343|ref|XP_002871555.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297317392|gb|EFH47814.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 822

 Score =  447 bits (1149), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 259/732 (35%), Positives = 405/732 (55%), Gaps = 19/732 (2%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHL-RKNTALTPDNFTYSFV---- 114
           A  LF  +P+ +   +  + +G++     +  +  Y+ L R+   L P  FT SF+    
Sbjct: 103 ALNLFDEMPERNNVSYVTLTQGYA----CQDPVGLYSRLHREGHELNPHVFT-SFLKLFV 157

Query: 115 -LSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKD 173
            L  A  C        LH   +  GY S+ FVGAAL++ Y     V SAR VF+ +  KD
Sbjct: 158 SLDKAEIC------WWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARSVFEGILCKD 211

Query: 174 TVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQ 233
            V+W  ++S  ++N CF+DS+ +   M  +G    ++ +    L A   +        + 
Sbjct: 212 IVVWAGIVSCYVENGCFEDSLQLLSRMGMDGFM-PNNYTFDTALKASIGLGAFHFAKSVH 270

Query: 234 CLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTE 293
              LK  +     V  GL+  Y++ G++  A  +F ++ + D++  + MI+ +  NG   
Sbjct: 271 GQILKTCYELDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCN 330

Query: 294 SSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALS 353
            ++ +F ++       N  T+  ++          L   +H   +K G   +  V  AL 
Sbjct: 331 KAVDIFIRMREGFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDVYVSNALI 390

Query: 354 TVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPV 413
            VY++  +M+ A KLF E S K++ SWN +I GY   G   +A+++F+E   ++V+   V
Sbjct: 391 DVYAKCEKMDTAVKLFAELSSKNVVSWNTVIVGYENLGEGGKALNMFREALRNQVSVTEV 450

Query: 414 TVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLM 473
           T SS L ACA L ++ LG  VH L    N    + VS +LIDMYAKCG+I  A+ +F+ M
Sbjct: 451 TFSSALGACASLASMELGVQVHGLAIKTNNAKRVAVSNSLIDMYAKCGDIKVAQTVFNEM 510

Query: 474 SHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGD 533
                 +WN +ISGY  HG G +AL++F  M  S  +P+G+TFL VL  CS+AGL+ +G 
Sbjct: 511 ETIDVASWNALISGYSTHGLGRQALRIFDIMKGSDCKPNGLTFLGVLSGCSNAGLIDQGQ 570

Query: 534 EIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMI 593
           + F+SMI DHG +P  EHY CMV + GR+GQL+KA+  I+G+  EP   +W A+L A M 
Sbjct: 571 DCFESMICDHGIEPCLEHYTCMVRLFGRSGQLDKAMNLIEGIPYEPSVMIWRAMLSASMN 630

Query: 594 HKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCT 653
             +   AR ++E++ +++P++   +VLLSN+Y+  + +   A++R+ +K++ + K PG +
Sbjct: 631 QYNEEFARRSAEEILKINPKDEATYVLLSNMYAGAKQWANVASIRKSMKEKGVKKEPGLS 690

Query: 654 LIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMM 713
            IE  G  H F+ G   HP    I  MLE LN K   AG+  +    L D+++EEK+  +
Sbjct: 691 WIEHQGDVHFFSVGSSDHPDMKLINGMLEWLNMKATRAGYVPDRNAVLLDMDDEEKDKRL 750

Query: 714 KVHSEKLAIAFGLIATEPG-TEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHH 772
            VHSE+LA+A+GL+        I I+KNLR+C DCH+A K IS +  R +V+RD NRFHH
Sbjct: 751 WVHSERLALAYGLVRMPSSRNRILIMKNLRICSDCHSAMKVISSIVQRDLVIRDMNRFHH 810

Query: 773 FKGGVCSCGDYW 784
           F  GVCSC D+W
Sbjct: 811 FHAGVCSCDDHW 822



 Score =  199 bits (506), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 136/465 (29%), Positives = 227/465 (48%), Gaps = 7/465 (1%)

Query: 130 LHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCC 189
           +H   +  G   DLF    L++ Y K  + K A  +FD+MPE++ V + ++  G      
Sbjct: 71  IHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEMPERNNVSYVTLTQGY----A 126

Query: 190 FQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLT 249
            QD + ++  + R G   L+     + L     + +  +   +    +KLG+  + +V  
Sbjct: 127 CQDPVGLYSRLHREGHE-LNPHVFTSFLKLFVSLDKAEICWWLHSPIVKLGYDSNAFVGA 185

Query: 250 GLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERV 309
            L++ YS CG V+ A  +F  I+  D++    ++S Y  NG  E SL+L  ++       
Sbjct: 186 ALINAYSVCGSVDSARSVFEGILCKDIVVWAGIVSCYVENGCFEDSLQLLSRMGMDGFMP 245

Query: 310 NSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLF 369
           N+ T    +      G  H    +H   LK+    +  V   L  +Y++L +M  A K+F
Sbjct: 246 NNYTFDTALKASIGLGAFHFAKSVHGQILKTCYELDPRVGVGLLQLYTQLGDMSDAFKVF 305

Query: 370 DESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAIS 429
           +E  +  +  W+ MIA + QNG   +A+ +F  M+   V PN  T+SSIL+ CA      
Sbjct: 306 NEMPKNDVVPWSFMIARFCQNGFCNKAVDIFIRMREGFVVPNEFTLSSILNGCAIGKCSG 365

Query: 430 LGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYG 489
           LG+ +H LV    F+ ++YVS ALID+YAKC  +  A +LF  +S K+ V+WNT+I GY 
Sbjct: 366 LGEQLHGLVVKVGFDLDVYVSNALIDVYAKCEKMDTAVKLFAELSSKNVVSWNTVIVGYE 425

Query: 490 LHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLA 549
             G G +AL +F E L + +  + VTF S L AC+    +  G ++    I  +  K +A
Sbjct: 426 NLGEGGKALNMFREALRNQVSVTEVTFSSALGACASLASMELGVQVHGLAIKTNNAKRVA 485

Query: 550 EHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIH 594
              + ++D+  + G ++ A      +      A W AL+     H
Sbjct: 486 VSNS-LIDMYAKCGDIKVAQTVFNEMET-IDVASWNALISGYSTH 528



 Score =  109 bits (272), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 84/369 (22%), Positives = 160/369 (43%), Gaps = 5/369 (1%)

Query: 208 LDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELL 267
           LDS +   +L       +      I C  LK G    ++    L++ Y K G  + A  L
Sbjct: 47  LDSHAYGTMLRRCIRKNDSVSAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNL 106

Query: 268 FRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHL 327
           F ++   + +S   +  GY C    +  + L+ +L      +N       + +F      
Sbjct: 107 FDEMPERNNVSYVTLTQGYAC----QDPVGLYSRLHREGHELNPHVFTSFLKLFVSLDKA 162

Query: 328 HLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGY 387
            +   +HS  +K G  SN+ V  AL   YS    +++AR +F+    K +  W  +++ Y
Sbjct: 163 EICWWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARSVFEGILCKDIVVWAGIVSCY 222

Query: 388 TQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNI 447
            +NG  E+++ L   M      PN  T  + L A   LGA    K VH  +    +E + 
Sbjct: 223 VENGCFEDSLQLLSRMGMDGFMPNNYTFDTALKASIGLGAFHFAKSVHGQILKTCYELDP 282

Query: 448 YVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHS 507
            V   L+ +Y + G++ +A ++F+ M     V W+ MI+ +  +G   +A+ +F  M   
Sbjct: 283 RVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNKAVDIFIRMREG 342

Query: 508 GIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEK 567
            + P+  T  S+L  C+       G+++   ++   GF         ++D+  +  +++ 
Sbjct: 343 FVVPNEFTLSSILNGCAIGKCSGLGEQL-HGLVVKVGFDLDVYVSNALIDVYAKCEKMDT 401

Query: 568 ALEFIKGLA 576
           A++    L+
Sbjct: 402 AVKLFAELS 410



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 64/280 (22%), Positives = 123/280 (43%), Gaps = 6/280 (2%)

Query: 27  QTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSN-N 85
           Q H  ++  GF  D+     L    +  +    A  LF  +   ++  +N +I G+ N  
Sbjct: 369 QLHGLVVKVGFDLDVYVSNALIDVYAKCEKMDTAVKLFAELSSKNVVSWNTVIVGYENLG 428

Query: 86  EMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFV 145
           E  K+   F   LR   ++T    T+S  L A ++     +GV +HG AI +     + V
Sbjct: 429 EGGKALNMFREALRNQVSVT--EVTFSSALGACASLASMELGVQVHGLAIKTNNAKRVAV 486

Query: 146 GAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGG 205
             +L+D+Y K   +K A+ VF++M   D   WN++ISG   +   + ++ +F D+++   
Sbjct: 487 SNSLIDMYAKCGDIKVAQTVFNEMETIDVASWNALISGYSTHGLGRQALRIF-DIMKGSD 545

Query: 206 TWLDSTSVAAVLPAVAEVQELRLGME-IQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERA 264
              +  +   VL   +    +  G +  + +    G    +   T +V  + + G++++A
Sbjct: 546 CKPNGLTFLGVLSGCSNAGLIDQGQDCFESMICDHGIEPCLEHYTCMVRLFGRSGQLDKA 605

Query: 265 ELLFRDI-VRPDLISCNAMISGYTCNGKTESSLRLFRQLL 303
             L   I   P ++   AM+S        E + R   ++L
Sbjct: 606 MNLIEGIPYEPSVMIWRAMLSASMNQYNEEFARRSAEEIL 645


>gi|15227144|ref|NP_179798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75206010|sp|Q9SHZ8.1|PP168_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g22070
 gi|4587589|gb|AAD25817.1| hypothetical protein [Arabidopsis thaliana]
 gi|330252165|gb|AEC07259.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 786

 Score =  447 bits (1149), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 274/761 (36%), Positives = 401/761 (52%), Gaps = 104/761 (13%)

Query: 124 RSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMP------------- 170
           R    L+H   I SG    +++   L+++Y K  +   ARK+FD+MP             
Sbjct: 30  RFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSA 89

Query: 171 ------------------EKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDST- 211
                             ++D+V W +MI G      +  +I V GDMV+ G   ++ T 
Sbjct: 90  YSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEG---IEPTQ 146

Query: 212 -SVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLF-- 268
            ++  VL +VA  + +  G ++    +KLG   +V V   L++ Y+KCG+   A+ +F  
Sbjct: 147 FTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDR 206

Query: 269 ---RDI--------------------------VRPDLISCNAMISGYTCNGKTESSLRLF 299
              RDI                             D+++ N+MISG+   G    +L +F
Sbjct: 207 MVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIF 266

Query: 300 RQLLA-SAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSR 358
            ++L  S    +  T+  ++        L +   IHS  + +G   +  VL AL ++YSR
Sbjct: 267 SKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSR 326

Query: 359 LNEMEAARKLFDESSEKSL---------------------------------ASWNAMIA 385
              +E AR+L ++   K L                                  +W AMI 
Sbjct: 327 CGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIV 386

Query: 386 GYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVH-ELVKSRNFE 444
           GY Q+G   EAI+LF+ M      PN  T++++LS  + L ++S GK +H   VKS    
Sbjct: 387 GYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIY 446

Query: 445 SNIYVSTALIDMYAKCGNIVEARELFDLMS-HKSEVTWNTMISGYGLHGHGLEALQLFSE 503
           S + VS ALI MYAK GNI  A   FDL+   +  V+W +MI     HGH  EAL+LF  
Sbjct: 447 S-VSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFET 505

Query: 504 MLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAG 563
           ML  G+RP  +T++ V  AC+HAGLV +G + F  M       P   HYACMVD+ GRAG
Sbjct: 506 MLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAG 565

Query: 564 QLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSN 623
            L++A EFI+ + +EP    WG+LL AC +HK+ +L +VA+E+L  L+PEN G +  L+N
Sbjct: 566 LLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALAN 625

Query: 624 IYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEK 683
           +YSA   + +AA +R+ +K  ++ K  G + IEV    HVF   D  HP+   IY  ++K
Sbjct: 626 LYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMKK 685

Query: 684 LNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRV 743
           +  ++++ G+  +T + LHD+EEE KE +++ HSEKLAIAFGLI+T   T +RI+KNLRV
Sbjct: 686 IWDEIKKMGYVPDTASVLHDLEEEVKEQILRHHSEKLAIAFGLISTPDKTTLRIMKNLRV 745

Query: 744 CLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           C DCHTA KFISK+ GR I+VRD  RFHHFK G CSC DYW
Sbjct: 746 CNDCHTAIKFISKLVGREIIVRDTTRFHHFKDGFCSCRDYW 786



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 128/517 (24%), Positives = 224/517 (43%), Gaps = 71/517 (13%)

Query: 42  STVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKN 101
           +TV     +  D  +TC     F  +P+ D   +  +I G+ N      +I     + K 
Sbjct: 84  NTVLSAYSKRGDMDSTC---EFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKE 140

Query: 102 TALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKS 161
             + P  FT + VL++ +A      G  +H   +  G   ++ V  +L+++Y K      
Sbjct: 141 -GIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMM 199

Query: 162 ARKVFDKMPEKDTVLW-------------------------------NSMISGLMKNCCF 190
           A+ VFD+M  +D   W                               NSMISG  +    
Sbjct: 200 AKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYD 259

Query: 191 QDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTG 250
             ++ +F  M+R+     D  ++A+VL A A +++L +G +I    +  GF     VL  
Sbjct: 260 LRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNA 319

Query: 251 LVSFYSKCGEVERAELL---------------------------------FRDIVRPDLI 277
           L+S YS+CG VE A  L                                 F  +   D++
Sbjct: 320 LISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVV 379

Query: 278 SCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFC 337
           +  AMI GY  +G    ++ LFR ++   +R NS T+  ++ V      L     IH   
Sbjct: 380 AWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSA 439

Query: 338 LKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDE-SSEKSLASWNAMIAGYTQNGLTEEA 396
           +KSG + + SV  AL T+Y++   + +A + FD    E+   SW +MI    Q+G  EEA
Sbjct: 440 VKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEA 499

Query: 397 ISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRN-FESNIYVSTALID 455
           + LF+ M    + P+ +T   + SAC   G ++ G+   +++K  +     +     ++D
Sbjct: 500 LELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVD 559

Query: 456 MYAKCGNIVEARELFDLMSHKSE-VTWNTMISGYGLH 491
           ++ + G + EA+E  + M  + + VTW +++S   +H
Sbjct: 560 LFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVH 596



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 113/453 (24%), Positives = 197/453 (43%), Gaps = 87/453 (19%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           A A F  + + D+  +N +I GF+       ++  ++ + +++ L+PD FT + VLSA +
Sbjct: 231 AMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACA 290

Query: 120 ACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARK--------------- 164
                 IG  +H H + +G+     V  AL+ +Y +   V++AR+               
Sbjct: 291 NLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGF 350

Query: 165 ------------------VFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGT 206
                             +F  + ++D V W +MI G  ++  + ++I +F  MV  GG 
Sbjct: 351 TALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMV-GGGQ 409

Query: 207 WLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAEL 266
             +S ++AA+L   + +  L  G +I    +K G    V V   L++ Y+K G +  A  
Sbjct: 410 RPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASR 469

Query: 267 LFRDIVR--PDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPF 324
            F D++R   D +S  +MI     +G  E +L LF  +L    R +  T VG        
Sbjct: 470 AF-DLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVG-------- 520

Query: 325 GHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSE-----KSLAS 379
                   + S C  +G+V+                     R+ FD   +      +L+ 
Sbjct: 521 --------VFSACTHAGLVNQ-------------------GRQYFDMMKDVDKIIPTLSH 553

Query: 380 WNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHE--- 436
           +  M+  + + GL +EA    ++M    + P+ VT  S+LSAC     I LGK   E   
Sbjct: 554 YACMVDLFGRAGLLQEAQEFIEKM---PIEPDVVTWGSLLSACRVHKNIDLGKVAAERLL 610

Query: 437 LVKSRNFESNIYVSTALIDMYAKCGNIVEAREL 469
           L++  N  S  Y  +AL ++Y+ CG   EA ++
Sbjct: 611 LLEPEN--SGAY--SALANLYSACGKWEEAAKI 639



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 55/242 (22%), Positives = 106/242 (43%), Gaps = 41/242 (16%)

Query: 409 APNPVTVSSILSACAQLGAISL----GKWVHELVKSRNFES----NIYVSTALIDMYAKC 460
           AP P+++S++L  C  L   S+    G++  +LV  R  +S    ++Y+   L+++Y+K 
Sbjct: 3   APVPLSLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKT 62

Query: 461 GNIVEARELFDLMSHKSEVTWNTMIS-------------------------------GYG 489
           G  + AR+LFD M  ++  +WNT++S                               GY 
Sbjct: 63  GYALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYK 122

Query: 490 LHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLA 549
             G   +A+++  +M+  GI P+  T  +VL + +    +  G ++  S I   G +   
Sbjct: 123 NIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKV-HSFIVKLGLRGNV 181

Query: 550 EHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFE 609
                ++++  + G    A +F+    V    + W A++   M     +LA    E++ E
Sbjct: 182 SVSNSLLNMYAKCGDPMMA-KFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAE 240

Query: 610 LD 611
            D
Sbjct: 241 RD 242


>gi|449462994|ref|XP_004149219.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Cucumis sativus]
 gi|449500964|ref|XP_004161240.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Cucumis sativus]
          Length = 624

 Score =  446 bits (1148), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 225/538 (41%), Positives = 326/538 (60%)

Query: 247 VLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASA 306
           V   L+  Y + G +E A+ LF  + +    S + ++ GY   G   S   +FR+LL S 
Sbjct: 87  VANKLLYMYVERGALEDAQELFDGMSKRHPYSWSVIVGGYAKVGNFFSCFWMFRELLRSG 146

Query: 307 ERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAAR 366
             ++  +   +I        L     IH   LK G+     V   L  +Y+R   +E A 
Sbjct: 147 APLDDYSAPVVIRACRDLKDLKCGRLIHCITLKCGLDYGHFVCATLVDMYARCKVVEDAH 206

Query: 367 KLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLG 426
           ++F +  ++ LA+W  MI    ++G+  E++  F  M+   + P+ V + +++ ACA+LG
Sbjct: 207 QIFVKMWKRDLATWTVMIGALAESGVPVESLVFFDRMRNQGIVPDKVALVTVVYACAKLG 266

Query: 427 AISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMIS 486
           A++  K +H  +    +  ++ + TA+IDMYAKCG++  AR +FD M  ++ +TW+ MI+
Sbjct: 267 AMNKAKAIHAYINGTGYSLDVILGTAMIDMYAKCGSVESARWIFDRMQVRNVITWSAMIA 326

Query: 487 GYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFK 546
            YG HG G +AL+LF  ML SGI P+ +TF+S+LYACSHAGL+ EG   F SM  ++G  
Sbjct: 327 AYGYHGQGEKALELFPMMLRSGILPNRITFVSLLYACSHAGLIEEGQRFFSSMWDEYGVT 386

Query: 547 PLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEK 606
           P  +HY CMVD+LGRAG+L++ALE I+G+ VE    +WGALLGAC IH+  +LA   +  
Sbjct: 387 PDVKHYTCMVDLLGRAGRLDEALEMIEGMPVEKDEVLWGALLGACRIHRHLDLAERVARS 446

Query: 607 LFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTS 666
           L +L  +  G++VLLSNIY+    +   A  R ++ K  L K PG T IEVG   + F  
Sbjct: 447 LLKLQSQKPGHYVLLSNIYANAGKWEDMAKTRDLMTKGGLRKIPGRTWIEVGEKLYQFGV 506

Query: 667 GDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGL 726
           GD+ HP+S  IY ML++L  K+  AG+  +T   L+DV+EE K+ ++  HSEKLAIAFGL
Sbjct: 507 GDKTHPRSNEIYKMLKRLGEKLEVAGYHPDTNDVLYDVDEEVKQGLLYSHSEKLAIAFGL 566

Query: 727 IATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           +    G  IRI KNLRVC DCHT  KF+S +  + I+VRDA RFHHFK GVCSC DYW
Sbjct: 567 LVLPQGHPIRITKNLRVCGDCHTFCKFVSLIEQKTIIVRDAKRFHHFKEGVCSCRDYW 624



 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 103/396 (26%), Positives = 191/396 (48%), Gaps = 4/396 (1%)

Query: 130 LHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCC 189
           +H     +G   +L V   L+ +Y +   ++ A+++FD M ++    W+ ++ G  K   
Sbjct: 72  VHAQIATNGAFRNLAVANKLLYMYVERGALEDAQELFDGMSKRHPYSWSVIVGGYAKVGN 131

Query: 190 FQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLT 249
           F    W+F +++R+G   LD  S   V+ A  ++++L+ G  I C+ LK G     +V  
Sbjct: 132 FFSCFWMFRELLRSGAP-LDDYSAPVVIRACRDLKDLKCGRLIHCITLKCGLDYGHFVCA 190

Query: 250 GLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERV 309
            LV  Y++C  VE A  +F  + + DL +   MI     +G    SL  F ++       
Sbjct: 191 TLVDMYARCKVVEDAHQIFVKMWKRDLATWTVMIGALAESGVPVESLVFFDRMRNQGIVP 250

Query: 310 NSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLF 369
           +   +V ++      G ++    IH++   +G   +  + TA+  +Y++   +E+AR +F
Sbjct: 251 DKVALVTVVYACAKLGAMNKAKAIHAYINGTGYSLDVILGTAMIDMYAKCGSVESARWIF 310

Query: 370 DESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAIS 429
           D    +++ +W+AMIA Y  +G  E+A+ LF  M  S + PN +T  S+L AC+  G I 
Sbjct: 311 DRMQVRNVITWSAMIAAYGYHGQGEKALELFPMMLRSGILPNRITFVSLLYACSHAGLIE 370

Query: 430 LG-KWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMS-HKSEVTWNTMISG 487
            G ++   +        ++   T ++D+  + G + EA E+ + M   K EV W  ++  
Sbjct: 371 EGQRFFSSMWDEYGVTPDVKHYTCMVDLLGRAGRLDEALEMIEGMPVEKDEVLWGALLGA 430

Query: 488 YGLHGHGLEALQLFSEMLH-SGIRPSGVTFLSVLYA 522
             +H H   A ++   +L     +P     LS +YA
Sbjct: 431 CRIHRHLDLAERVARSLLKLQSQKPGHYVLLSNIYA 466



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 113/440 (25%), Positives = 194/440 (44%), Gaps = 23/440 (5%)

Query: 12  FLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPD 71
           F S L   +   Q+ Q HAQI  +G   +L+   KL +   +  A   A+ LF  + K  
Sbjct: 56  FRSSLLSCRNLFQVRQVHAQIATNGAFRNLAVANKLLYMYVERGALEDAQELFDGMSKRH 115

Query: 72  LFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLH 131
            + ++VI+ G++      S    +  L ++ A   D+++   V+ A     D   G L+H
Sbjct: 116 PYSWSVIVGGYAKVGNFFSCFWMFRELLRSGA-PLDDYSAPVVIRACRDLKDLKCGRLIH 174

Query: 132 GHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQ 191
              +  G     FV A LVD+Y +   V+ A ++F KM ++D   W  MI  L ++    
Sbjct: 175 CITLKCGLDYGHFVCATLVDMYARCKVVEDAHQIFVKMWKRDLATWTVMIGALAESGVPV 234

Query: 192 DSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGL 251
           +S+ VF D +RN G   D  ++  V+ A A++  +     I       G+   V + T +
Sbjct: 235 ESL-VFFDRMRNQGIVPDKVALVTVVYACAKLGAMNKAKAIHAYINGTGYSLDVILGTAM 293

Query: 252 VSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNS 311
           +  Y+KCG VE A  +F  +   ++I+ +AMI+ Y  +G+ E +L LF  +L S    N 
Sbjct: 294 IDMYAKCGSVESARWIFDRMQVRNVITWSAMIAAYGYHGQGEKALELFPMMLRSGILPNR 353

Query: 312 STIVGLIPVFYPFGHLHL----TNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARK 367
            T V L+   Y   H  L         S   + G+  +    T +  +  R   ++ A +
Sbjct: 354 ITFVSLL---YACSHAGLIEEGQRFFSSMWDEYGVTPDVKHYTCMVDLLGRAGRLDEALE 410

Query: 368 LFDESS-EKSLASWNAMIAG---YTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACA 423
           + +    EK    W A++     +    L E       ++Q+ K  P    + S + A A
Sbjct: 411 MIEGMPVEKDEVLWGALLGACRIHRHLDLAERVARSLLKLQSQK--PGHYVLLSNIYANA 468

Query: 424 QLGAISLGKWVHELVKSRNF 443
                  GKW  ++ K+R+ 
Sbjct: 469 -------GKW-EDMAKTRDL 480



 Score =  108 bits (271), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 71/280 (25%), Positives = 124/280 (44%), Gaps = 9/280 (3%)

Query: 333 IHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGL 392
           +H+    +G   N +V   L  +Y     +E A++LFD  S++   SW+ ++ GY + G 
Sbjct: 72  VHAQIATNGAFRNLAVANKLLYMYVERGALEDAQELFDGMSKRHPYSWSVIVGGYAKVGN 131

Query: 393 TEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTA 452
                 +F+E+  S    +  +   ++ AC  L  +  G+ +H +      +   +V   
Sbjct: 132 FFSCFWMFRELLRSGAPLDDYSAPVVIRACRDLKDLKCGRLIHCITLKCGLDYGHFVCAT 191

Query: 453 LIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPS 512
           L+DMYA+C  + +A ++F  M  +   TW  MI      G  +E+L  F  M + GI P 
Sbjct: 192 LVDMYARCKVVEDAHQIFVKMWKRDLATWTVMIGALAESGVPVESLVFFDRMRNQGIVPD 251

Query: 513 GVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFI 572
            V  ++V+YAC+  G + +   I  + I+  G+         M+D+  + G +E A    
Sbjct: 252 KVALVTVVYACAKLGAMNKAKAI-HAYINGTGYSLDVILGTAMIDMYAKCGSVESARWIF 310

Query: 573 KGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDP 612
             + V      W A++ A   H          EK  EL P
Sbjct: 311 DRMQVR-NVITWSAMIAAYGYHGQ-------GEKALELFP 342


>gi|356557279|ref|XP_003546945.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Glycine max]
          Length = 631

 Score =  446 bits (1147), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 230/571 (40%), Positives = 339/571 (59%), Gaps = 1/571 (0%)

Query: 214 AAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVR 273
           A++L +    + L  G ++     +LG   ++ + T LV+FYS C  +  A  LF  I +
Sbjct: 62  ASLLESCISAKALEPGKQLHARLCQLGIAYNLDLATKLVNFYSVCNSLRNAHHLFDKIPK 121

Query: 274 PDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCI 333
            +L   N +I  Y  NG  E+++ L+ Q+L    + ++ T+  ++        +     I
Sbjct: 122 GNLFLWNVLIRAYAWNGPHETAISLYHQMLEYGLKPDNFTLPFVLKACSALSTIGEGRVI 181

Query: 334 HSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLT 393
           H   ++SG   +  V  AL  +Y++   +  AR +FD+  ++    WN+M+A Y QNG  
Sbjct: 182 HERVIRSGWERDVFVGAALVDMYAKCGCVVDARHVFDKIVDRDAVLWNSMLAAYAQNGHP 241

Query: 394 EEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTAL 453
           +E++SL  EM A  V P   T+ +++S+ A +  +  G+ +H       F+ N  V TAL
Sbjct: 242 DESLSLCCEMAAKGVRPTEATLVTVISSSADIACLPHGREIHGFGWRHGFQYNDKVKTAL 301

Query: 454 IDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSG 513
           IDMYAKCG++  A  LF+ +  K  V+WN +I+GY +HG  +EAL LF  M+    +P  
Sbjct: 302 IDMYAKCGSVKVACVLFERLREKRVVSWNAIITGYAMHGLAVEALDLFERMMKEA-QPDH 360

Query: 514 VTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIK 573
           +TF+  L ACS   L+ EG  ++  M+ D    P  EHY CMVD+LG  GQL++A + I+
Sbjct: 361 ITFVGALAACSRGRLLDEGRALYNLMVRDCRINPTVEHYTCMVDLLGHCGQLDEAYDLIR 420

Query: 574 GLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQ 633
            + V P   VWGALL +C  H +  LA VA EKL EL+P++ G +V+L+N+Y+    +  
Sbjct: 421 QMDVMPDSGVWGALLNSCKTHGNVELAEVALEKLIELEPDDSGNYVILANMYAQSGKWEG 480

Query: 634 AATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGF 693
            A +RQ++  + + K   C+ IEV    + F SGD  HP S AIYA L++L G MREAG+
Sbjct: 481 VARLRQLMIDKGIKKNIACSWIEVKNKVYAFLSGDVSHPNSGAIYAELKRLEGLMREAGY 540

Query: 694 QTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKF 753
             +T +  HDVEE+EK  M+  HSE+LAIAFGLI+T PGT + I KNLR+C DCH A KF
Sbjct: 541 VPDTGSVFHDVEEDEKTDMVCSHSERLAIAFGLISTLPGTRLLITKNLRICEDCHVAIKF 600

Query: 754 ISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           ISK+T R I VRD NR+HHF+ G+CSCGDYW
Sbjct: 601 ISKITEREITVRDVNRYHHFRHGLCSCGDYW 631



 Score =  179 bits (453), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 145/476 (30%), Positives = 225/476 (47%), Gaps = 42/476 (8%)

Query: 5   TPQSRNLFLSLLKG---AKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYAR 61
           +P +   + SLL+    AK      Q HA++   G   +L   TKL +  S   +   A 
Sbjct: 54  SPSNHYYYASLLESCISAKALEPGKQLHARLCQLGIAYNLDLATKLVNFYSVCNSLRNAH 113

Query: 62  ALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASAC 121
            LF  IPK +LFL+NV+IR ++ N   +++I  Y H      L PDNFT  FVL A SA 
Sbjct: 114 HLFDKIPKGNLFLWNVLIRAYAWNGPHETAISLY-HQMLEYGLKPDNFTLPFVLKACSAL 172

Query: 122 CDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMI 181
                G ++H   I SG+  D+FVGAALVD+Y K   V  AR VFDK+ ++D VLWNSM+
Sbjct: 173 STIGEGRVIHERVIRSGWERDVFVGAALVDMYAKCGCVVDARHVFDKIVDRDAVLWNSML 232

Query: 182 SGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGF 241
           +   +N    +S+ +  +M   G    ++T V  V+ + A++  L  G EI   G + GF
Sbjct: 233 AAYAQNGHPDESLSLCCEMAAKGVRPTEATLV-TVISSSADIACLPHGREIHGFGWRHGF 291

Query: 242 HDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQ 301
             +  V T L+  Y+KCG V+ A +LF  +    ++S NA+I+GY  +G    +L LF +
Sbjct: 292 QYNDKVKTALIDMYAKCGSVKVACVLFERLREKRVVSWNAIITGYAMHGLAVEALDLFER 351

Query: 302 LLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNE 361
           ++  A+  +  T VG +                  C +  ++     L  L     R+N 
Sbjct: 352 MMKEAQP-DHITFVGALAA----------------CSRGRLLDEGRALYNLMVRDCRIN- 393

Query: 362 MEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSA 421
                         ++  +  M+      G  +EA  L ++M    V P+     ++L++
Sbjct: 394 -------------PTVEHYTCMVDLLGHCGQLDEAYDLIRQMD---VMPDSGVWGALLNS 437

Query: 422 CAQLGAISLGKWVHE-LVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHK 476
           C   G + L +   E L++    +S  YV   L +MYA+ G       L  LM  K
Sbjct: 438 CKTHGNVELAEVALEKLIELEPDDSGNYV--ILANMYAQSGKWEGVARLRQLMIDK 491


>gi|34393605|dbj|BAC83258.1| pentatricopeptide (PPR) repeat-containing protein-like protein
           [Oryza sativa Japonica Group]
 gi|50509373|dbj|BAD30928.1| pentatricopeptide (PPR) repeat-containing protein-like protein
           [Oryza sativa Japonica Group]
          Length = 808

 Score =  446 bits (1146), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 244/699 (34%), Positives = 375/699 (53%), Gaps = 73/699 (10%)

Query: 159 VKSARKVFDKMP--EKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAV 216
           ++ A   FD +P   +DTVL N+M+S   +      ++ VF  ++ +G    D  S  A+
Sbjct: 110 LRDAAAFFDAVPPARRDTVLHNAMMSAFARASLAAPAVSVFHALLGSGSLRPDDYSFTAL 169

Query: 217 LPAVAEVQELRLG--MEIQCLGLKLGFHDHVYVLTGLVSFYSKC---------------- 258
           + AV ++  L      ++ C  LK G    + V   L++ Y KC                
Sbjct: 170 ISAVGQMHNLAAPHCTQLHCSVLKSGAAAVLSVSNALIALYMKCDTPEASWDARKVLDEM 229

Query: 259 ------------------GEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFR 300
                             G+V  A  +F ++     +  NAMISGY  +G    +  LFR
Sbjct: 230 PDKDDLTWTTMVVGYVRRGDVNAARSVFEEVDGKFDVVWNAMISGYVQSGMCADAFELFR 289

Query: 301 QLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHS--FCLKSGIVSNSS--VLTALSTVY 356
           ++++    ++  T   ++      G       +H     L+   V  ++  V  AL T+Y
Sbjct: 290 RMVSEKVPLDEFTFTSVLSACANAGFFVHGKSVHGQIIRLQPNFVPEAALPVNNALVTLY 349

Query: 357 SRLNEMEAARKLFDESSEKSLASWNA-------------------------------MIA 385
           S+  ++  A+++FD  + K + SWN                                M++
Sbjct: 350 SKGGKIVIAKRIFDTMNLKDVVSWNTILSGYIDSGCLDKAVEVFKVMPYKNDLSWMVMVS 409

Query: 386 GYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFES 445
           GY   GL+E+A+ LF +M+A  V P   T +  ++AC +LGA+  G+ +H  +    FE+
Sbjct: 410 GYVHGGLSEDALKLFNQMRAEDVKPCDYTYAGAIAACGELGALKHGRQLHAHLVQCGFEA 469

Query: 446 NIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEML 505
           +     AL+ MYAKCG + +AR +F +M +   V+WN MIS  G HGHG EAL+LF +M+
Sbjct: 470 SNSAGNALLTMYAKCGAVNDARLVFLVMPNLDSVSWNAMISALGQHGHGREALELFDQMV 529

Query: 506 HSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQL 565
             GI P  ++FL++L AC+HAGLV EG   F+SM  D G  P  +HYA ++D+LGR+G++
Sbjct: 530 AEGIDPDRISFLTILTACNHAGLVDEGFHYFESMKRDFGISPGEDHYARLIDLLGRSGRI 589

Query: 566 EKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIY 625
            +A + IK +  EP P++W A+L  C  + D      A+++LF + P++ G ++LLSN Y
Sbjct: 590 GEARDLIKTMPFEPTPSIWEAILSGCRTNGDMEFGAYAADQLFRMIPQHDGTYILLSNTY 649

Query: 626 SAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLN 685
           SA   ++ AA VR++++ R + K PGC+ IEVG   HVF  GD  HP++  +Y  LE + 
Sbjct: 650 SAAGRWVDAARVRKLMRDRGVKKEPGCSWIEVGSKIHVFLVGDTKHPEAQEVYQFLEVIG 709

Query: 686 GKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCL 745
            +MR+ G+  +T   LHD+E  EKE ++  HSEKLA+ FGL+   PG  + ++KNLR+C 
Sbjct: 710 ARMRKLGYVPDTKFVLHDMEPHEKEYILFAHSEKLAVGFGLLKLPPGATVTVLKNLRICG 769

Query: 746 DCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           DCHTA  F+SK  GR IVVRD  RFHHFK G CSCG+YW
Sbjct: 770 DCHTAMMFMSKAVGREIVVRDVRRFHHFKDGECSCGNYW 808



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 141/530 (26%), Positives = 228/530 (43%), Gaps = 102/530 (19%)

Query: 48  AHRLSDFKATCYARALFFSIP--KPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALT 105
           A RL D      A A F ++P  + D  L N ++  F+   +   ++  +  L  + +L 
Sbjct: 107 AGRLRD------AAAFFDAVPPARRDTVLHNAMMSAFARASLAAPAVSVFHALLGSGSLR 160

Query: 106 PDNFTYSFVLSA-------ASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFK--- 155
           PD+++++ ++SA       A+  C +     LH   + SG  + L V  AL+ LY K   
Sbjct: 161 PDDYSFTALISAVGQMHNLAAPHCTQ-----LHCSVLKSGAAAVLSVSNALIALYMKCDT 215

Query: 156 --FSWVKSARKVFDKMPEKDT-------------------------------VLWNSMIS 182
              SW   ARKV D+MP+KD                                V+WN+MIS
Sbjct: 216 PEASW--DARKVLDEMPDKDDLTWTTMVVGYVRRGDVNAARSVFEEVDGKFDVVWNAMIS 273

Query: 183 GLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEI--QCLGLKLG 240
           G +++    D+  +F  MV      LD  +  +VL A A       G  +  Q + L+  
Sbjct: 274 GYVQSGMCADAFELFRRMVSEK-VPLDEFTFTSVLSACANAGFFVHGKSVHGQIIRLQPN 332

Query: 241 F--HDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNA----------------- 281
           F     + V   LV+ YSK G++  A+ +F  +   D++S N                  
Sbjct: 333 FVPEAALPVNNALVTLYSKGGKIVIAKRIFDTMNLKDVVSWNTILSGYIDSGCLDKAVEV 392

Query: 282 --------------MISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHL 327
                         M+SGY   G +E +L+LF Q+ A   +    T  G I      G L
Sbjct: 393 FKVMPYKNDLSWMVMVSGYVHGGLSEDALKLFNQMRAEDVKPCDYTYAGAIAACGELGAL 452

Query: 328 HLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGY 387
                +H+  ++ G  +++S   AL T+Y++   +  AR +F         SWNAMI+  
Sbjct: 453 KHGRQLHAHLVQCGFEASNSAGNALLTMYAKCGAVNDARLVFLVMPNLDSVSWNAMISAL 512

Query: 388 TQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNF---- 443
            Q+G   EA+ LF +M A  + P+ ++  +IL+AC   G +  G    E +K R+F    
Sbjct: 513 GQHGHGREALELFDQMVAEGIDPDRISFLTILTACNHAGLVDEGFHYFESMK-RDFGISP 571

Query: 444 ESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVT-WNTMISGYGLHG 492
             + Y    LID+  + G I EAR+L   M  +   + W  ++SG   +G
Sbjct: 572 GEDHYAR--LIDLLGRSGRIGEARDLIKTMPFEPTPSIWEAILSGCRTNG 619



 Score =  122 bits (306), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 103/369 (27%), Positives = 166/369 (44%), Gaps = 78/369 (21%)

Query: 249 TGLVSFYSKCGEVERAELLFRDIVRP---DLISCNAMISGYTCNGKTESSLRLFRQLLAS 305
           T LV+ ++  G +  A   F D V P   D +  NAM+S +        ++ +F  LL S
Sbjct: 98  TSLVAAHAAAGRLRDAAAFF-DAVPPARRDTVLHNAMMSAFARASLAAPAVSVFHALLGS 156

Query: 306 AE-RVNSSTIVGLIPVFYPFGHLHLTNC--IHSFCLKSGIVSNSSVLTALSTVYSRLNEM 362
              R +  +   LI       +L   +C  +H   LKSG  +  SV  AL  +Y + +  
Sbjct: 157 GSLRPDDYSFTALISAVGQMHNLAAPHCTQLHCSVLKSGAAAVLSVSNALIALYMKCDTP 216

Query: 363 EA---ARKLFDESSEKSLASWNAMI-------------------------------AGYT 388
           EA   ARK+ DE  +K   +W  M+                               +GY 
Sbjct: 217 EASWDARKVLDEMPDKDDLTWTTMVVGYVRRGDVNAARSVFEEVDGKFDVVWNAMISGYV 276

Query: 389 QNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVH-ELVK-SRNF--E 444
           Q+G+  +A  LF+ M + KV  +  T +S+LSACA  G    GK VH ++++   NF  E
Sbjct: 277 QSGMCADAFELFRRMVSEKVPLDEFTFTSVLSACANAGFFVHGKSVHGQIIRLQPNFVPE 336

Query: 445 SNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGY---------------- 488
           + + V+ AL+ +Y+K G IV A+ +FD M+ K  V+WNT++SGY                
Sbjct: 337 AALPVNNALVTLYSKGGKIVIAKRIFDTMNLKDVVSWNTILSGYIDSGCLDKAVEVFKVM 396

Query: 489 --------------GLHGHGL--EALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREG 532
                          +HG GL  +AL+LF++M    ++P   T+   + AC   G ++ G
Sbjct: 397 PYKNDLSWMVMVSGYVHG-GLSEDALKLFNQMRAEDVKPCDYTYAGAIAACGELGALKHG 455

Query: 533 DEIFQSMIH 541
            ++   ++ 
Sbjct: 456 RQLHAHLVQ 464



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 63/254 (24%), Positives = 112/254 (44%), Gaps = 24/254 (9%)

Query: 63  LFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACC 122
           +F  +P  +   + V++ G+ +  + + ++  +  +R    + P ++TY+  ++A     
Sbjct: 392 VFKVMPYKNDLSWMVMVSGYVHGGLSEDALKLFNQMRAED-VKPCDYTYAGAIAACGELG 450

Query: 123 DRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMIS 182
               G  LH H +  G+ +    G AL+ +Y K   V  AR VF  MP  D+V WN+MIS
Sbjct: 451 ALKHGRQLHAHLVQCGFEASNSAGNALLTMYAKCGAVNDARLVFLVMPNLDSVSWNAMIS 510

Query: 183 GLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEI-----QCLGL 237
            L ++   ++++ +F  MV  G    D  S   +L A      +  G        +  G+
Sbjct: 511 ALGQHGHGREALELFDQMVAEGID-PDRISFLTILTACNHAGLVDEGFHYFESMKRDFGI 569

Query: 238 KLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVR-----PDLISCNAMISGYTCNGKT 292
             G  DH   L  L+    + GE        RD+++     P      A++SG   NG  
Sbjct: 570 SPG-EDHYARLIDLLGRSGRIGEA-------RDLIKTMPFEPTPSIWEAILSGCRTNGDM 621

Query: 293 E----SSLRLFRQL 302
           E    ++ +LFR +
Sbjct: 622 EFGAYAADQLFRMI 635


>gi|222617563|gb|EEE53695.1| hypothetical protein OsJ_00010 [Oryza sativa Japonica Group]
          Length = 1008

 Score =  445 bits (1145), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 258/755 (34%), Positives = 393/755 (52%), Gaps = 52/755 (6%)

Query: 60   ARALFFSIPKPDLFLFNVIIRGFSNN-EMPKSSICFYTHLRKNT---------------- 102
            ARA+F  +P  ++F  N+I+  +S++ ++P +   F +   +N                 
Sbjct: 276  ARAMFDQMPHKNIFSLNLILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRT 335

Query: 103  -------------ALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAAL 149
                          + PD  T + VL+    C   S    LH  AI  G  + +FV   L
Sbjct: 336  SDALSLFRAMLGEGVIPDRVTVTTVLNL-PGCTVPS----LHPFAIKFGLDTHVFVCNTL 390

Query: 150  VDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLD 209
            +D Y K   + +AR+VF +M +KD V +N+M+ G  K      ++ +F  M R G +   
Sbjct: 391  LDAYCKHGLLAAARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGYS--- 447

Query: 210  STSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFR 269
                            L L              + V+V   L+ FYSKC  ++    LF 
Sbjct: 448  -------------RHPLHLLQYSHSRSRSTSVLN-VFVNNSLLDFYSKCDCLDDMRRLFD 493

Query: 270  DIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHL 329
            ++   D +S N +I+ Y  N    + LRLFR++              ++ V      +H+
Sbjct: 494  EMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVHI 553

Query: 330  TNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQ 389
               IH+  +  G+ S   +  AL  +YS+   ++AA+  F   SEKS  SW A+I GY Q
Sbjct: 554  GKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQ 613

Query: 390  NGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYV 449
            NG  EEA+ LF +M+ + + P+  T SSI+ A + L  I LG+ +H  +    ++S+++ 
Sbjct: 614  NGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFS 673

Query: 450  STALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGI 509
             + L+DMYAKCG + EA   FD M  ++ ++WN +IS Y  +G    A+++F  MLH G 
Sbjct: 674  GSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISAYAHYGEAKNAIKMFEGMLHCGF 733

Query: 510  RPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKAL 569
             P  VTFLSVL ACSH GL  E  + F  M H +   P  EHYAC++D LGR G   +  
Sbjct: 734  NPDSVTFLSVLAACSHNGLADECMKYFHLMKHQYSISPWKEHYACVIDTLGRVGCFSQVQ 793

Query: 570  EFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAER 629
            + +  +  +  P +W ++L +C IH +  LARVA++KLF ++P +   +V+LSNIY+   
Sbjct: 794  KMLVEMPFKADPIIWTSILHSCRIHGNQELARVAADKLFGMEPTDATPYVILSNIYARAG 853

Query: 630  DYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMR 689
             +  AA V+++++ R + K  G + +E+    + F S D   P    I   L++L  +M 
Sbjct: 854  QWEDAACVKKIMRDRGVRKESGYSWVEIKQKIYSFASNDLTSPMIDEIKDELDRLYKEMD 913

Query: 690  EAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHT 749
            + G++ +   ALH V+ E K   +K HSE+LAIAF L+ T  GT IRI+KNL  CLDCH 
Sbjct: 914  KQGYKPDITCALHMVDHELKLESLKYHSERLAIAFALMNTPAGTPIRIMKNLTACLDCHA 973

Query: 750  ATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
              K ISK+  R I+VRD+ RFHHFK GVCSCGDYW
Sbjct: 974  VIKMISKIVNRDIIVRDSRRFHHFKDGVCSCGDYW 1008



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 56/184 (30%), Positives = 92/184 (50%), Gaps = 9/184 (4%)

Query: 325 GHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMI 384
           GHLH    +        I S + +L+A    YS   ++ AA+ LF  S  ++  +W  M+
Sbjct: 271 GHLHRARAMFDQMPHKNIFSLNLILSA----YSSSGDLPAAQHLFLSSPHRNATTWTIMM 326

Query: 385 AGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFE 444
             +   G T +A+SLF+ M    V P+ VTV+++L+    L   ++   +H        +
Sbjct: 327 RAHAAAGRTSDALSLFRAMLGEGVIPDRVTVTTVLN----LPGCTVPS-LHPFAIKFGLD 381

Query: 445 SNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEM 504
           ++++V   L+D Y K G +  AR +F  M  K  VT+N M+ G    G   +ALQLF+ M
Sbjct: 382 THVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAM 441

Query: 505 LHSG 508
             +G
Sbjct: 442 RRAG 445



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 37/121 (30%), Positives = 57/121 (47%), Gaps = 6/121 (4%)

Query: 405 ASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNF-----ESNIYVSTALIDMYAK 459
           +S+ AP  VT   +L+    LG  SL    H L ++R         NI+    ++  Y+ 
Sbjct: 242 SSQAAPAGVTGFDVLTYRLNLGLRSLLSSGH-LHRARAMFDQMPHKNIFSLNLILSAYSS 300

Query: 460 CGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSV 519
            G++  A+ LF    H++  TW  M+  +   G   +AL LF  ML  G+ P  VT  +V
Sbjct: 301 SGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAMLGEGVIPDRVTVTTV 360

Query: 520 L 520
           L
Sbjct: 361 L 361


>gi|414586388|tpg|DAA36959.1| TPA: hypothetical protein ZEAMMB73_269943 [Zea mays]
          Length = 643

 Score =  445 bits (1145), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 239/631 (37%), Positives = 354/631 (56%), Gaps = 26/631 (4%)

Query: 177 WNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAV----AEVQELRLGMEI 232
           W   I        F D++ +F   +R   +    +SV A LPA     A +    LG  +
Sbjct: 16  WAQQIRAAAAEGHFCDAVSLF---LRMRASAAPRSSVPASLPAALKSCAALGLSALGASL 72

Query: 233 QCLGLKLGFHDHVYVLTGLVSFYSK--CGEV-----------------ERAELLFRDIVR 273
             L ++ G     +    L++ Y K  C  +                 E    +F +++ 
Sbjct: 73  HALAIRSGAFADRFTANALLNLYCKVPCSYLDSTGVAIVDVPGSSTAFESVRKVFDEMIE 132

Query: 274 PDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCI 333
            D++S N ++ G    G+   +L   R++     R +S T+  ++P+F     +     +
Sbjct: 133 RDVVSWNTLVLGCAEEGRHHEALGFVRKMCREGFRPDSFTLSTVLPIFAECADVKRGLEV 192

Query: 334 HSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLT 393
           H F  ++G  S+  V ++L  +Y+     + + K+FD    +    WN+++AG  QNG  
Sbjct: 193 HGFAFRNGFDSDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDHILWNSLLAGCAQNGSV 252

Query: 394 EEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTAL 453
           EEA+ +F+ M  + V P PVT SS++  C  L ++  GK +H  V    FE N+++S++L
Sbjct: 253 EEALGIFRRMLQAGVRPVPVTFSSLIPVCGNLASLRFGKQLHAYVICGGFEDNVFISSSL 312

Query: 454 IDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSG 513
           IDMY KCG I  A  +FD MS    V+W  MI GY LHG   EAL LF  M     +P+ 
Sbjct: 313 IDMYCKCGEISIAHCIFDKMSSPDVVSWTAMIMGYALHGPAREALVLFERMELGNAKPNH 372

Query: 514 VTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIK 573
           +TFL+VL ACSHAGLV +G + F+SM + +G  P  EH+A + D LGRAG+L++A  FI 
Sbjct: 373 ITFLAVLTACSHAGLVDKGWKYFKSMSNHYGIVPTLEHFAALADTLGRAGELDEAYNFIS 432

Query: 574 GLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQ 633
            + ++P  +VW  LL AC +HK+T LA   ++K+ EL+P ++G HV+LSN+YSA   + +
Sbjct: 433 KMQIKPTASVWSTLLRACRVHKNTMLAEEVAKKIMELEPRSIGSHVVLSNMYSASGRWNE 492

Query: 634 AATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGF 693
           AA +R+ ++K+ + K P C+ IEV    HVF + D+ HP    I   L   + +M   G 
Sbjct: 493 AAHLRESMRKKGMKKDPACSWIEVKSKLHVFVAHDRSHPWYDRIIDALNAFSEQMAREGH 552

Query: 694 QTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKF 753
              T     D+EEE K  ++  HSEKLAI FG+I+T  GT+IR++KNLRVC+DCHT TKF
Sbjct: 553 VPNTEDVFQDIEEEHKSYVLCGHSEKLAIVFGIISTPAGTKIRVMKNLRVCIDCHTVTKF 612

Query: 754 ISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           ISK+  R IVVRDANRFHHFK G CSCGD+W
Sbjct: 613 ISKLADREIVVRDANRFHHFKDGNCSCGDFW 643



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 124/467 (26%), Positives = 217/467 (46%), Gaps = 28/467 (5%)

Query: 98  LRKNTALTPDNFTYSFVLSAASACCD---RSIGVLLHGHAIVSGYGSDLFVGAALVDLYF 154
           LR   +  P +   + + +A  +C      ++G  LH  AI SG  +D F   AL++LY 
Sbjct: 37  LRMRASAAPRSSVPASLPAALKSCAALGLSALGASLHALAIRSGAFADRFTANALLNLYC 96

Query: 155 KF-------------------SWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIW 195
           K                    +  +S RKVFD+M E+D V WN+++ G  +     +++ 
Sbjct: 97  KVPCSYLDSTGVAIVDVPGSSTAFESVRKVFDEMIERDVVSWNTLVLGCAEEGRHHEALG 156

Query: 196 VFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFY 255
               M R G    DS +++ VLP  AE  +++ G+E+     + GF   V+V + L+  Y
Sbjct: 157 FVRKMCREGFR-PDSFTLSTVLPIFAECADVKRGLEVHGFAFRNGFDSDVFVGSSLIDMY 215

Query: 256 SKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIV 315
           + C   + +  +F ++   D I  N++++G   NG  E +L +FR++L +  R    T  
Sbjct: 216 ANCTRTDYSVKVFDNLPVRDHILWNSLLAGCAQNGSVEEALGIFRRMLQAGVRPVPVTFS 275

Query: 316 GLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEK 375
            LIPV      L     +H++ +  G   N  + ++L  +Y +  E+  A  +FD+ S  
Sbjct: 276 SLIPVCGNLASLRFGKQLHAYVICGGFEDNVFISSSLIDMYCKCGEISIAHCIFDKMSSP 335

Query: 376 SLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLG-KWV 434
            + SW AMI GY  +G   EA+ LF+ M+     PN +T  ++L+AC+  G +  G K+ 
Sbjct: 336 DVVSWTAMIMGYALHGPAREALVLFERMELGNAKPNHITFLAVLTACSHAGLVDKGWKYF 395

Query: 435 HELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVT-WNTMISGYGLHGH 493
             +         +    AL D   + G + EA      M  K   + W+T++    +H +
Sbjct: 396 KSMSNHYGIVPTLEHFAALADTLGRAGELDEAYNFISKMQIKPTASVWSTLLRACRVHKN 455

Query: 494 GLEALQLFSEMLHSGIRPSGV-TFLSVLYACSHAGLVREGDEIFQSM 539
            + A ++  +++    R  G    LS +Y+ S  G   E   + +SM
Sbjct: 456 TMLAEEVAKKIMELEPRSIGSHVVLSNMYSAS--GRWNEAAHLRESM 500



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 98/377 (25%), Positives = 180/377 (47%), Gaps = 30/377 (7%)

Query: 61  RALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASA 120
           R +F  + + D+  +N ++ G +       ++ F   + +     PD+FT S VL   + 
Sbjct: 124 RKVFDEMIERDVVSWNTLVLGCAEEGRHHEALGFVRKMCRE-GFRPDSFTLSTVLPIFAE 182

Query: 121 CCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSM 180
           C D   G+ +HG A  +G+ SD+FVG++L+D+Y   +    + KVFD +P +D +LWNS+
Sbjct: 183 CADVKRGLEVHGFAFRNGFDSDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDHILWNSL 242

Query: 181 ISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLG 240
           ++G  +N   ++++ +F  M++ G   +  T  ++++P    +  LR G ++    +  G
Sbjct: 243 LAGCAQNGSVEEALGIFRRMLQAGVRPVPVT-FSSLIPVCGNLASLRFGKQLHAYVICGG 301

Query: 241 FHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFR 300
           F D+V++ + L+  Y KCGE+  A  +F  +  PD++S  AMI GY  +G    +L LF 
Sbjct: 302 FEDNVFISSSLIDMYCKCGEISIAHCIFDKMSSPDVVSWTAMIMGYALHGPAREALVLFE 361

Query: 301 QLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKS------------GIVSNSSV 348
           ++     + N  T + +           LT C H+  +              GIV     
Sbjct: 362 RMELGNAKPNHITFLAV-----------LTACSHAGLVDKGWKYFKSMSNHYGIVPTLEH 410

Query: 349 LTALSTVYSRLNEMEAARKLFDESSEKSLAS-WNAMIAG---YTQNGLTEEAISLFQEMQ 404
             AL+    R  E++ A     +   K  AS W+ ++     +    L EE      E++
Sbjct: 411 FAALADTLGRAGELDEAYNFISKMQIKPTASVWSTLLRACRVHKNTMLAEEVAKKIMELE 470

Query: 405 ASKVAPNPVTVSSILSA 421
              +  + V +S++ SA
Sbjct: 471 PRSIGSH-VVLSNMYSA 486



 Score = 66.6 bits (161), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 38/157 (24%), Positives = 75/157 (47%), Gaps = 1/157 (0%)

Query: 27  QTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNE 86
           + H     +GF +D+   + L    ++   T Y+  +F ++P  D  L+N ++ G + N 
Sbjct: 191 EVHGFAFRNGFDSDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDHILWNSLLAGCAQNG 250

Query: 87  MPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVG 146
             + ++  +  + +   + P   T+S ++           G  LH + I  G+  ++F+ 
Sbjct: 251 SVEEALGIFRRMLQ-AGVRPVPVTFSSLIPVCGNLASLRFGKQLHAYVICGGFEDNVFIS 309

Query: 147 AALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISG 183
           ++L+D+Y K   +  A  +FDKM   D V W +MI G
Sbjct: 310 SSLIDMYCKCGEISIAHCIFDKMSSPDVVSWTAMIMG 346


>gi|359483655|ref|XP_003632994.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Vitis vinifera]
          Length = 613

 Score =  445 bits (1145), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 225/539 (41%), Positives = 329/539 (61%), Gaps = 3/539 (0%)

Query: 246 YVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLAS 305
           Y++  L+SF   C  +  A  +F  I  P++ + N MI GY  +     +L L+RQ+  S
Sbjct: 78  YLIFTLLSF---CSPMSYAHQIFSQIQNPNIFTWNTMIRGYAESENPMPALELYRQMHVS 134

Query: 306 AERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAA 365
               ++ T   L+        +     +HS  +++G  S   V   L  +Y+     E+A
Sbjct: 135 CIEPDTHTYPFLLKAIAKLMDVREGEKVHSIAIRNGFESLVFVQNTLVHMYAACGHAESA 194

Query: 366 RKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQL 425
            KLF+  +E++L +WN++I GY  NG   EA++LF+EM    V P+  T+ S+LSACA+L
Sbjct: 195 HKLFELMAERNLVTWNSVINGYALNGRPNEALTLFREMGLRGVEPDGFTMVSLLSACAEL 254

Query: 426 GAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMI 485
           GA++LG+  H  +     + N++   AL+D+YAKCG+I +A ++FD M  KS V+W ++I
Sbjct: 255 GALALGRRAHVYMVKVGLDGNLHAGNALLDLYAKCGSIRQAHKVFDEMEEKSVVSWTSLI 314

Query: 486 SGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGF 545
            G  ++G G EAL+LF E+   G+ PS +TF+ VLYACSH G+V EG + F+ M  ++G 
Sbjct: 315 VGLAVNGFGKEALELFKELERKGLMPSEITFVGVLYACSHCGMVDEGFDYFKRMKEEYGI 374

Query: 546 KPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASE 605
            P  EHY CMVD+LGRAG +++A EFI+ + ++P   VW  LLGAC IH    L  VA  
Sbjct: 375 VPKIEHYGCMVDLLGRAGLVKQAHEFIQNMPMQPNAVVWRTLLGACTIHGHLALGEVARA 434

Query: 606 KLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFT 665
           +L +L+P++ G +VLLSN+Y++E+ +     VR+ + +  + K PG +L+E+    H F 
Sbjct: 435 QLLQLEPKHSGDYVLLSNLYASEQRWSDVHKVRRTMLREGVKKTPGHSLVELRNRLHEFV 494

Query: 666 SGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFG 725
            GD+ HPQ+  IY  L ++   ++  G+       L D+EEEEKE  +  HSEK+AIAF 
Sbjct: 495 MGDRSHPQTEEIYVKLAEITKLLKLEGYVPHISNVLADIEEEEKETALSYHSEKIAIAFM 554

Query: 726 LIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           LI T  G  IR++KNLRVC DCH A K ISKV  R IVVRD +RFHHFK G CSC DYW
Sbjct: 555 LINTAAGIPIRVVKNLRVCADCHLAIKLISKVFDREIVVRDRSRFHHFKDGHCSCKDYW 613



 Score =  155 bits (393), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 97/364 (26%), Positives = 177/364 (48%), Gaps = 4/364 (1%)

Query: 162 ARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVA 221
           A ++F ++   +   WN+MI G  ++     ++ ++  M        D+ +   +L A+A
Sbjct: 93  AHQIFSQIQNPNIFTWNTMIRGYAESENPMPALELYRQM-HVSCIEPDTHTYPFLLKAIA 151

Query: 222 EVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNA 281
           ++ ++R G ++  + ++ GF   V+V   LV  Y+ CG  E A  LF  +   +L++ N+
Sbjct: 152 KLMDVREGEKVHSIAIRNGFESLVFVQNTLVHMYAACGHAESAHKLFELMAERNLVTWNS 211

Query: 282 MISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSG 341
           +I+GY  NG+   +L LFR++       +  T+V L+      G L L    H + +K G
Sbjct: 212 VINGYALNGRPNEALTLFREMGLRGVEPDGFTMVSLLSACAELGALALGRRAHVYMVKVG 271

Query: 342 IVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQ 401
           +  N     AL  +Y++   +  A K+FDE  EKS+ SW ++I G   NG  +EA+ LF+
Sbjct: 272 LDGNLHAGNALLDLYAKCGSIRQAHKVFDEMEEKSVVSWTSLIVGLAVNGFGKEALELFK 331

Query: 402 EMQASKVAPNPVTVSSILSACAQLGAISLG-KWVHELVKSRNFESNIYVSTALIDMYAKC 460
           E++   + P+ +T   +L AC+  G +  G  +   + +       I     ++D+  + 
Sbjct: 332 ELERKGLMPSEITFVGVLYACSHCGMVDEGFDYFKRMKEEYGIVPKIEHYGCMVDLLGRA 391

Query: 461 GNIVEARELFDLMS-HKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSG-VTFLS 518
           G + +A E    M    + V W T++    +HGH        +++L    + SG    LS
Sbjct: 392 GLVKQAHEFIQNMPMQPNAVVWRTLLGACTIHGHLALGEVARAQLLQLEPKHSGDYVLLS 451

Query: 519 VLYA 522
            LYA
Sbjct: 452 NLYA 455



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 110/420 (26%), Positives = 190/420 (45%), Gaps = 37/420 (8%)

Query: 15  LLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTK--LAHRLSDFKATCYARALFFSIPKPDL 72
           LL  A ++ +  Q HA  I HG       + K  +   LS      YA  +F  I  P++
Sbjct: 46  LLSCASSKFKFRQIHAFSIRHGVPLTNPDMGKYLIFTLLSFCSPMSYAHQIFSQIQNPNI 105

Query: 73  FLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHG 132
           F +N +IRG++ +E P  ++  Y  +   + + PD  TY F+L A +   D   G  +H 
Sbjct: 106 FTWNTMIRGYAESENPMPALELYRQMHV-SCIEPDTHTYPFLLKAIAKLMDVREGEKVHS 164

Query: 133 HAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQD 192
            AI +G+ S +FV   LV +Y      +SA K+F+ M E++ V WNS+I+G   N    +
Sbjct: 165 IAIRNGFESLVFVQNTLVHMYAACGHAESAHKLFELMAERNLVTWNSVINGYALNGRPNE 224

Query: 193 SIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLV 252
           ++ +F +M    G   D  ++ ++L A AE+  L LG       +K+G   +++    L+
Sbjct: 225 ALTLFREMGLR-GVEPDGFTMVSLLSACAELGALALGRRAHVYMVKVGLDGNLHAGNALL 283

Query: 253 SFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSS 312
             Y+KCG + +A  +F ++    ++S  ++I G   NG  + +L LF++L       +  
Sbjct: 284 DLYAKCGSIRQAHKVFDEMEEKSVVSWTSLIVGLAVNGFGKEALELFKELERKGLMPSEI 343

Query: 313 TIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDES 372
           T VG+           L  C H   +  G              + R+ E        +  
Sbjct: 344 TFVGV-----------LYACSHCGMVDEGF-----------DYFKRMKE--------EYG 373

Query: 373 SEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGK 432
               +  +  M+    + GL ++A    Q M    + PN V   ++L AC   G ++LG+
Sbjct: 374 IVPKIEHYGCMVDLLGRAGLVKQAHEFIQNM---PMQPNAVVWRTLLGACTIHGHLALGE 430


>gi|297739586|emb|CBI29768.3| unnamed protein product [Vitis vinifera]
          Length = 676

 Score =  445 bits (1145), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 248/648 (38%), Positives = 361/648 (55%), Gaps = 43/648 (6%)

Query: 147 AALVDLYFKFSWVKSARKVFDKM--------PEKDTVLWNSMISGLMKNCCFQDSIWVFG 198
           A L+ LY K   + SAR +FD             ++ L N+M+          ++I ++ 
Sbjct: 62  ARLIILYSKLGDLHSARTLFDHRHHHHHGHTQAPNSFLCNTMLRAYANAGRSYEAIDLYI 121

Query: 199 DMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKC 258
            M R G   +++ +   VL   A       G  +    ++ GF   ++V   LV  Y+KC
Sbjct: 122 YMQRMG-VGVNNFTYPFVLKVCASELGAVFGEVVHGQVVRTGFGSDLFVEAALVDMYAKC 180

Query: 259 GEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLI 318
           GE+  A  +F  ++  D++   AMI+ Y    +   +L LFR++       +  T +   
Sbjct: 181 GEIGDAHEVFDRMLIRDVVCWTAMITLYEQAERPLKALMLFRKMQEEGFLGDEITAI--- 237

Query: 319 PVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLA 378
                                       SV +A+  +      +  AR +FD   E++  
Sbjct: 238 ----------------------------SVASAVGQLGDGRMAISRARLVFDRMEERNGI 269

Query: 379 SWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELV 438
           SWN+M++GYTQNG   +A+SLF +MQAS+  PNPVT   ++SAC+ LG+  LG+ +H  V
Sbjct: 270 SWNSMLSGYTQNGRPTDALSLFNQMQASECDPNPVTALIMVSACSYLGSKHLGRKLHNFV 329

Query: 439 KSRNFESNIYVSTALIDMYAKCGNIVEARELFD--LMSHKSEVTWNTMISGYGLHGHGLE 496
            S   + +  +  A++DMY KCG++  A E+F+   +  +   +WN +ISGYG+HGHG E
Sbjct: 330 ISSKMDIDTTLRNAIMDMYMKCGDLDTAVEMFNNCELGERDVSSWNVLISGYGVHGHGKE 389

Query: 497 ALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMV 556
           AL+LFS M   G+ P+ +TF S+L ACSHAGL+ EG + F  M      +P  +HYACMV
Sbjct: 390 ALELFSRMQVEGVEPNDITFTSILSACSHAGLIDEGRKCFADMT-KLSVRPEMKHYACMV 448

Query: 557 DILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVG 616
           D+LGRAG L +A   IK +   P   VWGALL AC IH +T L  +A+  LF+L+PE+ G
Sbjct: 449 DMLGRAGFLNEAFRLIKKIPSRPSDEVWGALLLACRIHGNTELGEIAANNLFQLEPEHTG 508

Query: 617 YHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTA 676
           Y+VL+SNIY+A   + +   VRQ +K R L K    ++IE G   H F + DQ  P    
Sbjct: 509 YYVLMSNIYAASNKWKEVEMVRQNMKSRGLKKPAAFSVIEFGTEVHGFHTADQSSPYYRE 568

Query: 677 IYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIR 736
           +Y  +E L  +M+  G+  +    LHDVE E+KE ++  HSEKLA+AFG++  + G  I+
Sbjct: 569 VYRKVESLAIEMKMVGYVPDLSCVLHDVEPEDKEHLLNYHSEKLAVAFGIMKMDQGMPIQ 628

Query: 737 IIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           + KNLRVC DCH A KFIS + GR I+VRD NRFHHF+GG CSCGDYW
Sbjct: 629 VTKNLRVCSDCHWAFKFISSIYGRKIIVRDGNRFHHFQGGRCSCGDYW 676



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 136/503 (27%), Positives = 240/503 (47%), Gaps = 51/503 (10%)

Query: 6   PQSRNLFLSLLKGAKTQSQLTQTHAQIIIHGF----QNDLSTVTKLAHRLSDFKATCYAR 61
           P   + +  LL+   + + L   H+ +   GF     + L+ +  L  +L D  +   AR
Sbjct: 22  PSLHHFYDHLLQCCTSLTTLKLIHSSLSTRGFLLHTPHFLARLIILYSKLGDLHS---AR 78

Query: 62  ALF--------FSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSF 113
            LF             P+ FL N ++R ++N      +I  Y ++++   +  +NFTY F
Sbjct: 79  TLFDHRHHHHHGHTQAPNSFLCNTMLRAYANAGRSYEAIDLYIYMQR-MGVGVNNFTYPF 137

Query: 114 VLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKD 173
           VL   ++      G ++HG  + +G+GSDLFV AALVD+Y K   +  A +VFD+M  +D
Sbjct: 138 VLKVCASELGAVFGEVVHGQVVRTGFGSDLFVEAALVDMYAKCGEIGDAHEVFDRMLIRD 197

Query: 174 TVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQ 233
            V W +MI+   +      ++ +F  M +  G   D  +  +V  AV ++ + R+     
Sbjct: 198 VVCWTAMITLYEQAERPLKALMLFRKM-QEEGFLGDEITAISVASAVGQLGDGRMA---- 252

Query: 234 CLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTE 293
                                      + RA L+F  +   + IS N+M+SGYT NG+  
Sbjct: 253 ---------------------------ISRARLVFDRMEERNGISWNSMLSGYTQNGRPT 285

Query: 294 SSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALS 353
            +L LF Q+ AS    N  T + ++      G  HL   +H+F + S +  ++++  A+ 
Sbjct: 286 DALSLFNQMQASECDPNPVTALIMVSACSYLGSKHLGRKLHNFVISSKMDIDTTLRNAIM 345

Query: 354 TVYSRLNEMEAARKLFD--ESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPN 411
            +Y +  +++ A ++F+  E  E+ ++SWN +I+GY  +G  +EA+ LF  MQ   V PN
Sbjct: 346 DMYMKCGDLDTAVEMFNNCELGERDVSSWNVLISGYGVHGHGKEALELFSRMQVEGVEPN 405

Query: 412 PVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEA-RELF 470
            +T +SILSAC+  G I  G+     +   +    +     ++DM  + G + EA R + 
Sbjct: 406 DITFTSILSACSHAGLIDEGRKCFADMTKLSVRPEMKHYACMVDMLGRAGFLNEAFRLIK 465

Query: 471 DLMSHKSEVTWNTMISGYGLHGH 493
            + S  S+  W  ++    +HG+
Sbjct: 466 KIPSRPSDEVWGALLLACRIHGN 488



 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 85/286 (29%), Positives = 123/286 (43%), Gaps = 23/286 (8%)

Query: 333 IHSFCLKSG-IVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLAS--------WNAM 383
           IHS     G ++     L  L  +YS+L ++ +AR LFD                  N M
Sbjct: 44  IHSSLSTRGFLLHTPHFLARLIILYSKLGDLHSARTLFDHRHHHHHGHTQAPNSFLCNTM 103

Query: 384 IAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACA-QLGAISLGKWVHELVKSRN 442
           +  Y   G + EAI L+  MQ   V  N  T   +L  CA +LGA+  G+ VH  V    
Sbjct: 104 LRAYANAGRSYEAIDLYIYMQRMGVGVNNFTYPFVLKVCASELGAV-FGEVVHGQVVRTG 162

Query: 443 FESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFS 502
           F S+++V  AL+DMYAKCG I +A E+FD M  +  V W  MI+ Y      L+AL LF 
Sbjct: 163 FGSDLFVEAALVDMYAKCGEIGDAHEVFDRMLIRDVVCWTAMITLYEQAERPLKALMLFR 222

Query: 503 EMLHSGIRPSGVTFLSVLYACSHAG----LVREGDEIFQSMIHDHGFKPLAEHYACMVDI 558
           +M   G     +T +SV  A    G     +     +F  M   +G       +  M+  
Sbjct: 223 KMQEEGFLGDEITAISVASAVGQLGDGRMAISRARLVFDRMEERNGIS-----WNSMLSG 277

Query: 559 LGRAGQLEKALEFIKGLAV---EPGPAVWGALLGACMIHKDTNLAR 601
             + G+   AL     +     +P P     ++ AC      +L R
Sbjct: 278 YTQNGRPTDALSLFNQMQASECDPNPVTALIMVSACSYLGSKHLGR 323


>gi|356546516|ref|XP_003541672.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Glycine max]
          Length = 591

 Score =  445 bits (1145), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 218/518 (42%), Positives = 322/518 (62%)

Query: 267 LFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGH 326
           +F  I  P++ + N +I GY  +     +   +RQ++ S    ++ T   L+       +
Sbjct: 74  VFTVIHNPNVFTWNTIIRGYAESDNPSPAFLFYRQMVVSCVEPDTHTYPFLLKAISKSLN 133

Query: 327 LHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAG 386
           +     IHS  +++G  S   V  +L  +Y+   + E+A K+F+   E+ L +WN+MI G
Sbjct: 134 VREGEAIHSVTIRNGFESLVFVQNSLLHIYAACGDTESAYKVFELMKERDLVAWNSMING 193

Query: 387 YTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESN 446
           +  NG   EA++LF+EM    V P+  TV S+LSA A+LGA+ LG+ VH  +       N
Sbjct: 194 FALNGRPNEALTLFREMSVEGVEPDGFTVVSLLSASAELGALELGRRVHVYLLKVGLSKN 253

Query: 447 IYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLH 506
            +V+ +L+D+YAKCG I EA+ +F  MS ++ V+W ++I G  ++G G EAL+LF EM  
Sbjct: 254 SHVTNSLLDLYAKCGAIREAQRVFSEMSERNAVSWTSLIVGLAVNGFGEEALELFKEMEG 313

Query: 507 SGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLE 566
            G+ PS +TF+ VLYACSH G++ EG E F+ M  + G  P  EHY CMVD+L RAG ++
Sbjct: 314 QGLVPSEITFVGVLYACSHCGMLDEGFEYFRRMKEECGIIPRIEHYGCMVDLLSRAGLVK 373

Query: 567 KALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYS 626
           +A E+I+ + V+P   +W  LLGAC IH    L  +A   L  L+P++ G +VLLSN+Y+
Sbjct: 374 QAYEYIQNMPVQPNAVIWRTLLGACTIHGHLGLGEIARSHLLNLEPKHSGDYVLLSNLYA 433

Query: 627 AERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNG 686
           +ER +     +R+ + K  + K PG +L+E+G   + FT GD+ HPQS  +YA+LEK+  
Sbjct: 434 SERRWSDVQVIRRSMLKDGVKKTPGYSLVELGNRVYEFTMGDRSHPQSQDVYALLEKITE 493

Query: 687 KMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLD 746
            ++  G+   T   L D+EEEEKE  +  HSEK+AIAF L+ T PGT IR++KNLRVC D
Sbjct: 494 LLKLEGYVPHTANVLADIEEEEKEQALSYHSEKVAIAFMLLNTPPGTPIRVMKNLRVCAD 553

Query: 747 CHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           CH A K I+K+  R IV+RD +RFHHF+GG CSC DYW
Sbjct: 554 CHMAIKLIAKIYDREIVIRDRSRFHHFRGGSCSCKDYW 591



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 101/365 (27%), Positives = 181/365 (49%), Gaps = 6/365 (1%)

Query: 162 ARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVA 221
           A  VF  +   +   WN++I G  ++     +   +  MV +     D+ +   +L A++
Sbjct: 71  AYNVFTVIHNPNVFTWNTIIRGYAESDNPSPAFLFYRQMVVSC-VEPDTHTYPFLLKAIS 129

Query: 222 EVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNA 281
           +   +R G  I  + ++ GF   V+V   L+  Y+ CG+ E A  +F  +   DL++ N+
Sbjct: 130 KSLNVREGEAIHSVTIRNGFESLVFVQNSLLHIYAACGDTESAYKVFELMKERDLVAWNS 189

Query: 282 MISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSG 341
           MI+G+  NG+   +L LFR++       +  T+V L+      G L L   +H + LK G
Sbjct: 190 MINGFALNGRPNEALTLFREMSVEGVEPDGFTVVSLLSASAELGALELGRRVHVYLLKVG 249

Query: 342 IVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQ 401
           +  NS V  +L  +Y++   +  A+++F E SE++  SW ++I G   NG  EEA+ LF+
Sbjct: 250 LSKNSHVTNSLLDLYAKCGAIREAQRVFSEMSERNAVSWTSLIVGLAVNGFGEEALELFK 309

Query: 402 EMQASKVAPNPVTVSSILSACAQLGAISLG-KWVHELVKSRNFESNIYVSTALIDMYAKC 460
           EM+   + P+ +T   +L AC+  G +  G ++   + +       I     ++D+ ++ 
Sbjct: 310 EMEGQGLVPSEITFVGVLYACSHCGMLDEGFEYFRRMKEECGIIPRIEHYGCMVDLLSRA 369

Query: 461 GNIVEARELFDLMS-HKSEVTWNTMISGYGLHGH-GLEALQLFSEMLHSGIRPSG-VTFL 517
           G + +A E    M    + V W T++    +HGH GL  +   S +L+   + SG    L
Sbjct: 370 GLVKQAYEYIQNMPVQPNAVIWRTLLGACTIHGHLGLGEIAR-SHLLNLEPKHSGDYVLL 428

Query: 518 SVLYA 522
           S LYA
Sbjct: 429 SNLYA 433



 Score =  152 bits (385), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 120/424 (28%), Positives = 196/424 (46%), Gaps = 40/424 (9%)

Query: 13  LSLLK-GAKTQSQLTQTHAQIIIHGFQ-NDLSTVTKLAHRLSDFKAT-CYARALFFSIPK 69
           +SLL+  A ++ +L Q HA  I HG   N+      L   +    A   YA  +F  I  
Sbjct: 21  ISLLQFCASSKHKLKQIHAFSIRHGVSLNNPDMGKHLIFTIVSLSAPMSYAYNVFTVIHN 80

Query: 70  PDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVL 129
           P++F +N IIRG++ ++ P  +  FY  +   + + PD  TY F+L A S   +   G  
Sbjct: 81  PNVFTWNTIIRGYAESDNPSPAFLFYRQMVV-SCVEPDTHTYPFLLKAISKSLNVREGEA 139

Query: 130 LHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCC 189
           +H   I +G+ S +FV  +L+ +Y      +SA KVF+ M E+D V WNSMI+G   N  
Sbjct: 140 IHSVTIRNGFESLVFVQNSLLHIYAACGDTESAYKVFELMKERDLVAWNSMINGFALNGR 199

Query: 190 FQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLT 249
             +++ +F +M    G   D  +V ++L A AE+  L LG  +    LK+G   + +V  
Sbjct: 200 PNEALTLFREMSVE-GVEPDGFTVVSLLSASAELGALELGRRVHVYLLKVGLSKNSHVTN 258

Query: 250 GLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERV 309
            L+  Y+KCG +  A+ +F ++   + +S  ++I G   NG  E +L LF+++       
Sbjct: 259 SLLDLYAKCGAIREAQRVFSEMSERNAVSWTSLIVGLAVNGFGEEALELFKEMEGQGLVP 318

Query: 310 NSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLF 369
           +  T VG+           L  C H   L  G                     E  R++ 
Sbjct: 319 SEITFVGV-----------LYACSHCGMLDEG--------------------FEYFRRMK 347

Query: 370 DESS-EKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAI 428
           +E      +  +  M+   ++ GL ++A    Q M    V PN V   ++L AC   G +
Sbjct: 348 EECGIIPRIEHYGCMVDLLSRAGLVKQAYEYIQNM---PVQPNAVIWRTLLGACTIHGHL 404

Query: 429 SLGK 432
            LG+
Sbjct: 405 GLGE 408



 Score =  112 bits (280), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 70/263 (26%), Positives = 129/263 (49%), Gaps = 4/263 (1%)

Query: 328 HLTNCIHSFCLKSGIVSNSSVLTA--LSTVYSRLNEMEAARKLFDESSEKSLASWNAMIA 385
           H    IH+F ++ G+  N+  +    + T+ S    M  A  +F      ++ +WN +I 
Sbjct: 32  HKLKQIHAFSIRHGVSLNNPDMGKHLIFTIVSLSAPMSYAYNVFTVIHNPNVFTWNTIIR 91

Query: 386 GYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFES 445
           GY ++     A   +++M  S V P+  T   +L A ++   +  G+ +H +     FES
Sbjct: 92  GYAESDNPSPAFLFYRQMVVSCVEPDTHTYPFLLKAISKSLNVREGEAIHSVTIRNGFES 151

Query: 446 NIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEML 505
            ++V  +L+ +YA CG+   A ++F+LM  +  V WN+MI+G+ L+G   EAL LF EM 
Sbjct: 152 LVFVQNSLLHIYAACGDTESAYKVFELMKERDLVAWNSMINGFALNGRPNEALTLFREMS 211

Query: 506 HSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQL 565
             G+ P G T +S+L A +  G +  G  +   ++   G    +     ++D+  + G +
Sbjct: 212 VEGVEPDGFTVVSLLSASAELGALELGRRVHVYLL-KVGLSKNSHVTNSLLDLYAKCGAI 270

Query: 566 EKALEFIKGLAVEPGPAVWGALL 588
            +A      ++ E     W +L+
Sbjct: 271 REAQRVFSEMS-ERNAVSWTSLI 292


>gi|15236277|ref|NP_195239.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75098809|sp|O49619.1|PP350_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g35130, chloroplastic; Flags: Precursor
 gi|2924523|emb|CAA17777.1| putative protein [Arabidopsis thaliana]
 gi|7270464|emb|CAB80230.1| putative protein [Arabidopsis thaliana]
 gi|332661071|gb|AEE86471.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 804

 Score =  445 bits (1145), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 245/743 (32%), Positives = 414/743 (55%), Gaps = 7/743 (0%)

Query: 44  VTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTA 103
           +T+     +D +    A  LF  + K D FL+NV+I+GF++  +   ++ FY+ +     
Sbjct: 67  LTRALRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRM-VFAG 125

Query: 104 LTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSAR 163
           +  D FTY FV+ + +       G  +H   I  G+ SD++V  +L+ LY K      A 
Sbjct: 126 VKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAE 185

Query: 164 KVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEV 223
           KVF++MPE+D V WNSMISG +       S+ +F +M++ G    D  S  + L A + V
Sbjct: 186 KVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFK-PDRFSTMSALGACSHV 244

Query: 224 QELRLGMEIQCLGLKLGFHD-HVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAM 282
              ++G EI C  ++       V V+T ++  YSK GEV  AE +F  +++ ++++ N M
Sbjct: 245 YSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVM 304

Query: 283 ISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGI 342
           I  Y  NG+   +   F+++  S +      ++  I +  P   +     IH + ++ G 
Sbjct: 305 IGCYARNGRVTDAFLCFQKM--SEQNGLQPDVITSINLL-PASAILEGRTIHGYAMRRGF 361

Query: 343 VSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQE 402
           + +  + TAL  +Y    ++++A  +FD  +EK++ SWN++IA Y QNG    A+ LFQE
Sbjct: 362 LPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQE 421

Query: 403 MQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGN 462
           +  S + P+  T++SIL A A+  ++S G+ +H  +    + SN  +  +L+ MYA CG+
Sbjct: 422 LWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGD 481

Query: 463 IVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYA 522
           + +AR+ F+ +  K  V+WN++I  Y +HG G  ++ LFSEM+ S + P+  TF S+L A
Sbjct: 482 LEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAA 541

Query: 523 CSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPA 582
           CS +G+V EG E F+SM  ++G  P  EHY CM+D++GR G    A  F++ +   P   
Sbjct: 542 CSISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTAR 601

Query: 583 VWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVK 642
           +WG+LL A   HKD  +A  A+E++F+++ +N G +VLL N+Y+    +     ++ +++
Sbjct: 602 IWGSLLNASRNHKDITIAEFAAEQIFKMEHDNTGCYVLLLNMYAEAGRWEDVNRIKLLME 661

Query: 643 KRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALH 702
            + +++    + +E  G  HVFT+GD+ H  +  IY +L+ ++  + E       V+ L 
Sbjct: 662 SKGISRTSSRSTVEAKGKSHVFTNGDRSHVATNKIYEVLDVVSRMVGEEDIYVHCVSRLR 721

Query: 703 -DVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRV 761
            +   + +    + HS +LA  FGLI+TE G  + +  N R+C  CH   +  S++T R 
Sbjct: 722 PETLVKSRSNSPRRHSVRLATCFGLISTETGRRVTVRNNTRICRKCHEFLEKASRLTRRE 781

Query: 762 IVVRDANRFHHFKGGVCSCGDYW 784
           IVV D+  FHHF  G CSCG+YW
Sbjct: 782 IVVGDSKIFHHFSNGRCSCGNYW 804



 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 81/279 (29%), Positives = 145/279 (51%), Gaps = 5/279 (1%)

Query: 40  DLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLR 99
           D+  +T +    S +    YA  +F  + + ++  +NV+I  ++ N     +   +  + 
Sbjct: 266 DVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMS 325

Query: 100 KNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWV 159
           +   L PD  T S  L  ASA  +   G  +HG+A+  G+   + +  AL+D+Y +   +
Sbjct: 326 EQNGLQPDVIT-SINLLPASAILE---GRTIHGYAMRRGFLPHMVLETALIDMYGECGQL 381

Query: 160 KSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPA 219
           KSA  +FD+M EK+ + WNS+I+  ++N     ++ +F ++  +     DST++A++LPA
Sbjct: 382 KSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELW-DSSLVPDSTTIASILPA 440

Query: 220 VAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISC 279
            AE   L  G EI    +K  +  +  +L  LV  Y+ CG++E A   F  I+  D++S 
Sbjct: 441 YAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVSW 500

Query: 280 NAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLI 318
           N++I  Y  +G    S+ LF +++AS    N ST   L+
Sbjct: 501 NSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLL 539


>gi|3297823|emb|CAA19881.1| putative protein [Arabidopsis thaliana]
 gi|7270348|emb|CAB80116.1| putative protein [Arabidopsis thaliana]
          Length = 844

 Score =  445 bits (1144), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 243/706 (34%), Positives = 396/706 (56%), Gaps = 25/706 (3%)

Query: 64  FFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCD 123
           F  I   D++ +N++I G+         I  ++    ++ LTPD  T+  VL A     D
Sbjct: 42  FDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVID 101

Query: 124 RSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISG 183
              G  +H  A+  G+  D++V A+L+ LY ++  V +AR +FD+MP +D   WN+MISG
Sbjct: 102 ---GNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISG 158

Query: 184 LMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHD 243
             ++   ++++      + NG   +DS +V ++L A  E  +   G+ I    +K G   
Sbjct: 159 YCQSGNAKEAL-----TLSNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLES 213

Query: 244 HVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLL 303
            +               +   + +F  +   DLIS N++I  Y  N +   ++ LF+++ 
Sbjct: 214 EL---------------LRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMR 258

Query: 304 ASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSG-IVSNSSVLTALSTVYSRLNEM 362
            S  + +  T++ L  +    G +     +  F L+ G  + + ++  A+  +Y++L  +
Sbjct: 259 LSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLV 318

Query: 363 EAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQAS-KVAPNPVTVSSILSA 421
           ++AR +F+      + SWN +I+GY QNG   EAI ++  M+   ++A N  T  S+L A
Sbjct: 319 DSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPA 378

Query: 422 CAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTW 481
           C+Q GA+  G  +H  +       +++V T+L DMY KCG + +A  LF  +   + V W
Sbjct: 379 CSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPW 438

Query: 482 NTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIH 541
           NT+I+ +G HGHG +A+ LF EML  G++P  +TF+++L ACSH+GLV EG   F+ M  
Sbjct: 439 NTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQT 498

Query: 542 DHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLAR 601
           D+G  P  +HY CMVD+ GRAGQLE AL+FIK ++++P  ++WGALL AC +H + +L +
Sbjct: 499 DYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGK 558

Query: 602 VASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTP 661
           +ASE LFE++PE+VGYHVLLSN+Y++   +     +R +   + L K PG + +EV    
Sbjct: 559 IASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKV 618

Query: 662 HVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLA 721
            VF +G+Q HP    +Y  L  L  K++  G+  +    L DVE++EKE ++  HSE+LA
Sbjct: 619 EVFYTGNQTHPMYEEMYRELTALQAKLKMIGYVPDHRFVLQDVEDDEKEHILMSHSERLA 678

Query: 722 IAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDA 767
           IAF LIAT   T IRI KNLR  +   T  + ++  T  ++  R+A
Sbjct: 679 IAFALIATPAKTTIRIFKNLRYEIKTQTKEERLTPQTQTIMSKRNA 724



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 146/478 (30%), Positives = 234/478 (48%), Gaps = 30/478 (6%)

Query: 150 VDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLD 209
           V  +   S  KS    FD +  +D   WN MISG  +     + I  F   + + G   D
Sbjct: 26  VSTHVSLSPNKSKMHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPD 85

Query: 210 STSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFR 269
             +  +VL A   V +   G +I CL LK GF   VYV   L+  YS+   V  A +LF 
Sbjct: 86  YRTFPSVLKACRTVID---GNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFD 142

Query: 270 DIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHL 329
           ++   D+ S NAMISGY  +G  + +L L   L A    ++S T+V L+      G  + 
Sbjct: 143 EMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRA----MDSVTVVSLLSACTEAGDFNR 198

Query: 330 TNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQ 389
              IHS+ +K G+ S                 +   +K+FD    + L SWN++I  Y  
Sbjct: 199 GVTIHSYSIKHGLESEL---------------LRDCQKVFDRMYVRDLISWNSIIKAYEL 243

Query: 390 NGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRN-FESNIY 448
           N     AISLFQEM+ S++ P+ +T+ S+ S  +QLG I   + V      +  F  +I 
Sbjct: 244 NEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDIT 303

Query: 449 VSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSG 508
           +  A++ MYAK G +  AR +F+ + +   ++WNT+ISGY  +G   EA+++++ M   G
Sbjct: 304 IGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEG 363

Query: 509 -IRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEK 567
            I  +  T++SVL ACS AG +R+G ++   ++ + G          + D+ G+ G+LE 
Sbjct: 364 EIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKN-GLYLDVFVVTSLADMYGKCGRLED 422

Query: 568 ALE-FIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFE--LDPENVGYHVLLS 622
           AL  F +   V   P  W  L+     H     A +  +++ +  + P+++ +  LLS
Sbjct: 423 ALSLFYQIPRVNSVP--WNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLS 478



 Score =  182 bits (463), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 152/551 (27%), Positives = 263/551 (47%), Gaps = 38/551 (6%)

Query: 5   TPQSRNLFLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALF 64
           TP  R  F S+LK  +T     + H   +  GF  D+     L H  S +KA   AR LF
Sbjct: 83  TPDYRT-FPSVLKACRTVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILF 141

Query: 65  FSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDR 124
             +P  D+  +N +I G+  +   K ++     LR       D+ T   +LSA +   D 
Sbjct: 142 DEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLR-----AMDSVTVVSLLSACTEAGDF 196

Query: 125 SIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGL 184
           + GV +H ++I  G  S+L               ++  +KVFD+M  +D + WNS+I   
Sbjct: 197 NRGVTIHSYSIKHGLESEL---------------LRDCQKVFDRMYVRDLISWNSIIKAY 241

Query: 185 MKNCCFQDSIWVFGDM--VRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLG-F 241
             N     +I +F +M   R     L   S+A++L  + +++  R    +Q   L+ G F
Sbjct: 242 ELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACR---SVQGFTLRKGWF 298

Query: 242 HDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQ 301
            + + +   +V  Y+K G V+ A  +F  +   D+IS N +ISGY  NG    ++ ++  
Sbjct: 299 LEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNI 358

Query: 302 LLASAE-RVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLN 360
           +    E   N  T V ++P     G L     +H   LK+G+  +  V+T+L+ +Y +  
Sbjct: 359 MEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCG 418

Query: 361 EMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILS 420
            +E A  LF +    +   WN +IA +  +G  E+A+ LF+EM    V P+ +T  ++LS
Sbjct: 419 RLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLS 478

Query: 421 ACAQLGAISLGKWVHELVKSR-NFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEV 479
           AC+  G +  G+W  E++++      ++     ++DMY + G +  A +    MS + + 
Sbjct: 479 ACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDA 538

Query: 480 T-WNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTF---LSVLYACSHAGLVREGDEI 535
           + W  ++S   +HG+ ++  ++ SE L   + P  V +   LS +YA   AG     DEI
Sbjct: 539 SIWGALLSACRVHGN-VDLGKIASEHLFE-VEPEHVGYHVLLSNMYAS--AGKWEGVDEI 594

Query: 536 FQSMIHDHGFK 546
            +S+ H  G +
Sbjct: 595 -RSIAHGKGLR 604


>gi|357485423|ref|XP_003612999.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355514334|gb|AES95957.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 676

 Score =  445 bits (1144), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 247/657 (37%), Positives = 374/657 (56%), Gaps = 5/657 (0%)

Query: 130 LHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCC 189
           LH H + SG     F G  L+D Y K S +  ARK+FD+MP +  V WNSMIS  +    
Sbjct: 23  LHTHILKSGSLFSFF-GHKLIDGYIKCSVITEARKLFDEMPNRHIVTWNSMISSHVSRGK 81

Query: 190 FQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFH-DHVYVL 248
            +++I ++ +M+  G    D+ + +A+  A +E+   R G +   L + LGF     +V 
Sbjct: 82  TKEAIELYDNMLFEG-VLPDAYTFSAIFKAFSEMGVSREGQKAHGLAVVLGFEVSDGFVA 140

Query: 249 TGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAER 308
           TG+V  Y+K G+++ A  +F  ++  D++   A+I GY   G    +L +F  ++ S  +
Sbjct: 141 TGIVDMYAKFGKMKDARFVFDRVLDKDVVLFTALIVGYNQRGLDGEALEVFEDMVGSRIK 200

Query: 309 VNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKL 368
            N  T+  ++      G L     IH   +KSG+ S  +  T+L T+YS+ N +E + K+
Sbjct: 201 PNEYTLASVLVSCGNLGDLVNGKLIHGLVVKSGLESVVASQTSLLTMYSKCNMVEDSIKV 260

Query: 369 FDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAI 428
           F+  +  S  +W + I G  QNG  E A+S+F+EM    ++PN  T SSIL AC+ L  +
Sbjct: 261 FNSLAYASHVTWTSFIVGLVQNGREEIALSMFREMIRCSISPNHFTFSSILHACSSLAML 320

Query: 429 SLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGY 488
             G+ +H +      + N YV  ALI +Y KCGN+ +AR +F+ ++    V+ NTMI  Y
Sbjct: 321 EAGEQIHAVTVKLGVDGNKYVDAALIHLYGKCGNVEKARSVFESLTELDVVSINTMIYAY 380

Query: 489 GLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPL 548
             +G G EAL+LF  M   G +P+ VTF+S+L AC++AGLV EG +IF  + ++H  +  
Sbjct: 381 AQNGFGHEALELFERMKKLGHKPNVVTFISILLACNNAGLVEEGCQIFSLIRNNHSIELT 440

Query: 549 AEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLF 608
            +HY CM+D+LGRA + E+A   I+     P    W  LL AC IH +  +A    +K+ 
Sbjct: 441 RDHYTCMIDLLGRAKRFEEAAMLIEE-GKNPDVIQWRTLLNACKIHGEVEMAEKFMKKML 499

Query: 609 ELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGD 668
           +  P + G H+LL+NIY++   +     ++   +  +L K P  + +++    H F +GD
Sbjct: 500 DQAPRDGGTHILLTNIYASAGKWDNVIEMKSAGRDLRLKKTPAMSWVDIDREVHTFMAGD 559

Query: 669 QLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIA 728
             HP++  I  ML +L  K+   G+  +T   L D+EEE+K   +  HSEKLAIAF L  
Sbjct: 560 LSHPRAHEISEMLHELIEKVITLGYNPDTKFVLQDLEEEKKISALYYHSEKLAIAFALWK 619

Query: 729 T-EPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           T    T IRI KNLRVC DCH+  KF+S +TGR I+ RDA RFHHFKGG+CSC DYW
Sbjct: 620 TCGKNTAIRIFKNLRVCGDCHSWIKFVSLLTGRDIIARDAKRFHHFKGGICSCKDYW 676



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 151/525 (28%), Positives = 244/525 (46%), Gaps = 21/525 (4%)

Query: 10  NLFLSLL---KGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCY----ARA 62
           N + SL+      K+ + L   H  I+  G     S  +   H+L D    C     AR 
Sbjct: 2   NCYTSLIAQFTNKKSLTTLKSLHTHILKSG-----SLFSFFGHKLIDGYIKCSVITEARK 56

Query: 63  LFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACC 122
           LF  +P   +  +N +I    +    K +I  Y ++     L PD +T+S +  A S   
Sbjct: 57  LFDEMPNRHIVTWNSMISSHVSRGKTKEAIELYDNMLFEGVL-PDAYTFSAIFKAFSEMG 115

Query: 123 DRSIGVLLHGHAIVSGYG-SDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMI 181
               G   HG A+V G+  SD FV   +VD+Y KF  +K AR VFD++ +KD VL+ ++I
Sbjct: 116 VSREGQKAHGLAVVLGFEVSDGFVATGIVDMYAKFGKMKDARFVFDRVLDKDVVLFTALI 175

Query: 182 SGLMKNCCFQDSIWVFGDMVRNGGTWL--DSTSVAAVLPAVAEVQELRLGMEIQCLGLKL 239
            G  +     +++ VF DMV   G+ +  +  ++A+VL +   + +L  G  I  L +K 
Sbjct: 176 VGYNQRGLDGEALEVFEDMV---GSRIKPNEYTLASVLVSCGNLGDLVNGKLIHGLVVKS 232

Query: 240 GFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLF 299
           G    V   T L++ YSKC  VE +  +F  +     ++  + I G   NG+ E +L +F
Sbjct: 233 GLESVVASQTSLLTMYSKCNMVEDSIKVFNSLAYASHVTWTSFIVGLVQNGREEIALSMF 292

Query: 300 RQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRL 359
           R+++  +   N  T   ++        L     IH+  +K G+  N  V  AL  +Y + 
Sbjct: 293 REMIRCSISPNHFTFSSILHACSSLAMLEAGEQIHAVTVKLGVDGNKYVDAALIHLYGKC 352

Query: 360 NEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSIL 419
             +E AR +F+  +E  + S N MI  Y QNG   EA+ LF+ M+     PN VT  SIL
Sbjct: 353 GNVEKARSVFESLTELDVVSINTMIYAYAQNGFGHEALELFERMKKLGHKPNVVTFISIL 412

Query: 420 SACAQLGAISLGKWVHELVKSRN-FESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSE 478
            AC   G +  G  +  L+++ +  E      T +ID+  +     EA  L +   +   
Sbjct: 413 LACNNAGLVEEGCQIFSLIRNNHSIELTRDHYTCMIDLLGRAKRFEEAAMLIEEGKNPDV 472

Query: 479 VTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGV-TFLSVLYA 522
           + W T+++   +HG    A +   +ML    R  G    L+ +YA
Sbjct: 473 IQWRTLLNACKIHGEVEMAEKFMKKMLDQAPRDGGTHILLTNIYA 517



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 99/416 (23%), Positives = 185/416 (44%), Gaps = 24/416 (5%)

Query: 27  QTHAQIIIHGFQ-NDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNN 85
           + H   ++ GF+ +D    T +    + F     AR +F  +   D+ LF  +I G++  
Sbjct: 122 KAHGLAVVLGFEVSDGFVATGIVDMYAKFGKMKDARFVFDRVLDKDVVLFTALIVGYNQR 181

Query: 86  EMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFV 145
            +   ++  +  +   + + P+ +T + VL +     D   G L+HG  + SG  S +  
Sbjct: 182 GLDGEALEVFEDM-VGSRIKPNEYTLASVLVSCGNLGDLVNGKLIHGLVVKSGLESVVAS 240

Query: 146 GAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGG 205
             +L+ +Y K + V+ + KVF+ +     V W S I GL++N   + ++ +F +M+R   
Sbjct: 241 QTSLLTMYSKCNMVEDSIKVFNSLAYASHVTWTSFIVGLVQNGREEIALSMFREMIRCSI 300

Query: 206 TWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAE 265
           +  +  + +++L A + +  L  G +I  + +KLG   + YV   L+  Y KCG VE+A 
Sbjct: 301 S-PNHFTFSSILHACSSLAMLEAGEQIHAVTVKLGVDGNKYVDAALIHLYGKCGNVEKAR 359

Query: 266 LLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFG 325
            +F  +   D++S N MI  Y  NG    +L LF ++     + N  T + ++      G
Sbjct: 360 SVFESLTELDVVSINTMIYAYAQNGFGHEALELFERMKKLGHKPNVVTFISILLACNNAG 419

Query: 326 HLHLTNCIHSFCLKSGIVSNSSV------LTALSTVYSRLNEMEAARKLFDESSEKSLAS 379
            +     I S      I +N S+       T +  +  R    E A  L +E     +  
Sbjct: 420 LVEEGCQIFSL-----IRNNHSIELTRDHYTCMIDLLGRAKRFEEAAMLIEEGKNPDVIQ 474

Query: 380 WNAMIAGYTQNGLTEEAISLFQEM--QASKVAPNPVTVSSILSACAQLGAISLGKW 433
           W  ++     +G  E A    ++M  QA +     + +++I +        S GKW
Sbjct: 475 WRTLLNACKIHGEVEMAEKFMKKMLDQAPRDGGTHILLTNIYA--------SAGKW 522


>gi|357114151|ref|XP_003558864.1| PREDICTED: pentatricopeptide repeat-containing protein At4g35130,
           chloroplastic-like [Brachypodium distachyon]
          Length = 782

 Score =  445 bits (1144), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 244/721 (33%), Positives = 392/721 (54%), Gaps = 14/721 (1%)

Query: 70  PDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVL 129
           PD FL NV+IRGF++  +P++++  Y  +    A  PD FT+  V+     CC R +G L
Sbjct: 70  PDAFLHNVVIRGFADAGLPEAALAAYRAMLAAGA-RPDRFTFPVVVK----CCAR-LGAL 123

Query: 130 LHGHAIVSG------YGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISG 183
             G A  S        GS+++ G +L+  Y K   V  A +VFD MP +D V WNSM+ G
Sbjct: 124 EEGRAAHSAAIRLGLVGSEVYTGNSLLAFYAKLGMVADAERVFDGMPVRDIVTWNSMVDG 183

Query: 184 LMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHD 243
            + N     ++  F +M        D   + A L A      L  G E+    ++ G   
Sbjct: 184 YVSNGLGALALDCFREMHEGLQVQHDGVGIIAALAACCLDSALMQGREVHAYVIRHGLEQ 243

Query: 244 HVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLL 303
            V V T L+  Y KCG +  AE +F  +    +++ N MI GY  NG  E +   F Q+ 
Sbjct: 244 DVKVGTSLLDMYCKCGAIASAEGMFATMPSRTVVTWNCMIGGYALNGCPEEAFDCFVQMK 303

Query: 304 ASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEME 363
           A   +V   T + L+              +H +  +S  + +  + TAL  +YS++ +++
Sbjct: 304 AEGHQVEVVTAINLLAACAQTESSLYGRSVHGYVTRSQFLPHVVLETALLEMYSKVGKVK 363

Query: 364 AARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACA 423
           ++  +F + + K+L SWN MIA Y    +  EAI+LF E+    + P+  T+S+++ A  
Sbjct: 364 SSETIFGQMTNKTLVSWNNMIAAYMYKEMYNEAITLFLELLNQPLYPDYFTMSAVVPAFV 423

Query: 424 QLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNT 483
            LG +   + +H  +   ++  N  V+ A++ MYA+CG++V +R++FD M+ K  ++WNT
Sbjct: 424 LLGLLRQCRQMHSYIVRLDYGENTLVTNAVMHMYARCGDVVSSRKIFDKMAGKDVISWNT 483

Query: 484 MISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDH 543
           +I GY +HG G  AL++FSEM  +G++P+  TF+SVL ACS +G+  EG   F  M  D+
Sbjct: 484 IIMGYAIHGQGKIALEMFSEMKSNGLQPNESTFVSVLTACSVSGMADEGWIQFNLMQRDY 543

Query: 544 GFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVA 603
           G  P  EHY CM D+LGRAG L + L+FI+ + + P   +WG+LL A     D ++A  A
Sbjct: 544 GIIPQIEHYGCMTDLLGRAGDLREVLKFIESIPITPTFRIWGSLLTASRNRNDIDIAEYA 603

Query: 604 SEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHV 663
           +E++FEL+ +N G +V+LS++Y+    +     +R  + ++ L +    +++E+ G+   
Sbjct: 604 AERIFELEHDNTGCYVILSSMYADAGRWEDVQRIRSSMMEKGLRRTDARSIVELHGSSCS 663

Query: 664 FTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIA 723
           F +GD  HPQS  I+ + + L+ K+ E  +       +       + ++   HS +LA+ 
Sbjct: 664 FVNGDMTHPQSKTIHEVSDVLSRKIGETDYPRNLSDPIS--LTSRRTIIPNKHSVRLAVV 721

Query: 724 FGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDY 783
           FGLI++E    I + KN+R+C  CH A K ISK + R IVV D N +H F  G C CGDY
Sbjct: 722 FGLISSEARAPILVKKNVRICNHCHHALKLISKYSRRRIVVGDTNIYHEFLDGSCCCGDY 781

Query: 784 W 784
           W
Sbjct: 782 W 782



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 109/417 (26%), Positives = 206/417 (49%), Gaps = 10/417 (2%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           A  +F  +P  D+  +N ++ G+ +N +   ++  +  + +   +  D      +++A +
Sbjct: 162 AERVFDGMPVRDIVTWNSMVDGYVSNGLGALALDCFREMHEGLQVQHDGVG---IIAALA 218

Query: 120 ACC-DRSI--GVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVL 176
           ACC D ++  G  +H + I  G   D+ VG +L+D+Y K   + SA  +F  MP +  V 
Sbjct: 219 ACCLDSALMQGREVHAYVIRHGLEQDVKVGTSLLDMYCKCGAIASAEGMFATMPSRTVVT 278

Query: 177 WNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLG 236
           WN MI G   N C +++   F  M +  G  ++  +   +L A A+ +    G  +    
Sbjct: 279 WNCMIGGYALNGCPEEAFDCFVQM-KAEGHQVEVVTAINLLAACAQTESSLYGRSVHGYV 337

Query: 237 LKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSL 296
            +  F  HV + T L+  YSK G+V+ +E +F  +    L+S N MI+ Y        ++
Sbjct: 338 TRSQFLPHVVLETALLEMYSKVGKVKSSETIFGQMTNKTLVSWNNMIAAYMYKEMYNEAI 397

Query: 297 RLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVY 356
            LF +LL      +  T+  ++P F   G L     +HS+ ++     N+ V  A+  +Y
Sbjct: 398 TLFLELLNQPLYPDYFTMSAVVPAFVLLGLLRQCRQMHSYIVRLDYGENTLVTNAVMHMY 457

Query: 357 SRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVS 416
           +R  ++ ++RK+FD+ + K + SWN +I GY  +G  + A+ +F EM+++ + PN  T  
Sbjct: 458 ARCGDVVSSRKIFDKMAGKDVISWNTIIMGYAIHGQGKIALEMFSEMKSNGLQPNESTFV 517

Query: 417 SILSACAQLGAISLGKWVHELVKSRNFE--SNIYVSTALIDMYAKCGNIVEARELFD 471
           S+L+AC+  G    G W+   +  R++     I     + D+  + G++ E  +  +
Sbjct: 518 SVLTACSVSGMADEG-WIQFNLMQRDYGIIPQIEHYGCMTDLLGRAGDLREVLKFIE 573



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 74/296 (25%), Positives = 149/296 (50%), Gaps = 4/296 (1%)

Query: 24  QLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFS 83
           Q  + HA +I HG + D+   T L        A   A  +F ++P   +  +N +I G++
Sbjct: 228 QGREVHAYVIRHGLEQDVKVGTSLLDMYCKCGAIASAEGMFATMPSRTVVTWNCMIGGYA 287

Query: 84  NNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSI-GVLLHGHAIVSGYGSD 142
            N  P+ +   +  ++            +  L AA A  + S+ G  +HG+   S +   
Sbjct: 288 LNGCPEEAFDCFVQMKAEGHQV--EVVTAINLLAACAQTESSLYGRSVHGYVTRSQFLPH 345

Query: 143 LFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVR 202
           + +  AL+++Y K   VKS+  +F +M  K  V WN+MI+  M    + ++I +F +++ 
Sbjct: 346 VVLETALLEMYSKVGKVKSSETIFGQMTNKTLVSWNNMIAAYMYKEMYNEAITLFLELL- 404

Query: 203 NGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVE 262
           N   + D  +++AV+PA   +  LR   ++    ++L + ++  V   ++  Y++CG+V 
Sbjct: 405 NQPLYPDYFTMSAVVPAFVLLGLLRQCRQMHSYIVRLDYGENTLVTNAVMHMYARCGDVV 464

Query: 263 RAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLI 318
            +  +F  +   D+IS N +I GY  +G+ + +L +F ++ ++  + N ST V ++
Sbjct: 465 SSRKIFDKMAGKDVISWNTIIMGYAIHGQGKIALEMFSEMKSNGLQPNESTFVSVL 520


>gi|18394615|ref|NP_564054.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806507|sp|Q0WN60.2|PPR48_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g18485
 gi|332191599|gb|AEE29720.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 970

 Score =  444 bits (1143), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 251/730 (34%), Positives = 390/730 (53%), Gaps = 5/730 (0%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRK---NTALTPDNFTYSFVLS 116
           A  LF  +P+ +L  +N +IR FS+N   + S      + +   + A  PD  T   VL 
Sbjct: 241 ALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLP 300

Query: 117 AASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVL 176
             +   +  +G  +HG A+      +L +  AL+D+Y K   + +A+ +F     K+ V 
Sbjct: 301 VCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVS 360

Query: 177 WNSMISGLMKNCCFQDSIWVFGDMVRNG-GTWLDSTSVAAVLPAVAEVQELRLGMEIQCL 235
           WN+M+ G         +  V   M+  G     D  ++   +P       L    E+ C 
Sbjct: 361 WNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCY 420

Query: 236 GLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESS 295
            LK  F  +  V    V+ Y+KCG +  A+ +F  I    + S NA+I G+  +     S
Sbjct: 421 SLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLS 480

Query: 296 LRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTV 355
           L    Q+  S    +S T+  L+        L L   +H F +++ +  +  V  ++ ++
Sbjct: 481 LDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSL 540

Query: 356 YSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTV 415
           Y    E+   + LFD   +KSL SWN +I GY QNG  + A+ +F++M    +    +++
Sbjct: 541 YIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISM 600

Query: 416 SSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSH 475
             +  AC+ L ++ LG+  H        E + +++ +LIDMYAK G+I ++ ++F+ +  
Sbjct: 601 MPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKE 660

Query: 476 KSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEI 535
           KS  +WN MI GYG+HG   EA++LF EM  +G  P  +TFL VL AC+H+GL+ EG   
Sbjct: 661 KSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRY 720

Query: 536 FQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFI-KGLAVEPGPAVWGALLGACMIH 594
              M    G KP  +HYAC++D+LGRAGQL+KAL  + + ++ E    +W +LL +C IH
Sbjct: 721 LDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIH 780

Query: 595 KDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTL 654
           ++  +    + KLFEL+PE    +VLLSN+Y+    +     VRQ + +  L K  GC+ 
Sbjct: 781 QNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSW 840

Query: 655 IEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMK 714
           IE+      F  G++       I ++   L  K+ + G++ +T++  HD+ EEEK   ++
Sbjct: 841 IELNRKVFSFVVGERFLDGFEEIKSLWSILEMKISKMGYRPDTMSVQHDLSEEEKIEQLR 900

Query: 715 VHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFK 774
            HSEKLA+ +GLI T  GT IR+ KNLR+C+DCH A K ISKV  R IVVRD  RFHHFK
Sbjct: 901 GHSEKLALTYGLIKTSEGTTIRVYKNLRICVDCHNAAKLISKVMEREIVVRDNKRFHHFK 960

Query: 775 GGVCSCGDYW 784
            GVCSCGDYW
Sbjct: 961 NGVCSCGDYW 970



 Score =  282 bits (721), Expect = 6e-73,   Method: Compositional matrix adjust.
 Identities = 175/559 (31%), Positives = 291/559 (52%), Gaps = 19/559 (3%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           +R +F ++   +LF +N +I  +S NE+    +  +  +   T L PD+FTY  V+ A +
Sbjct: 139 SRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACA 198

Query: 120 ACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNS 179
              D  IG+ +HG  + +G   D+FVG ALV  Y    +V  A ++FD MPE++ V WNS
Sbjct: 199 GMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNS 258

Query: 180 MISGLMKNCCFQDSIWVFGDMVR---NGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLG 236
           MI     N   ++S  + G+M+    +G    D  ++  VLP  A  +E+ LG  +    
Sbjct: 259 MIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWA 318

Query: 237 LKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSL 296
           +KL     + +   L+  YSKCG +  A+++F+     +++S N M+ G++  G T  + 
Sbjct: 319 VKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTF 378

Query: 297 RLFRQLLASAERVNSS--TIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALST 354
            + RQ+LA  E V +   TI+  +PV +    L     +H + LK   V N  V  A   
Sbjct: 379 DVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVA 438

Query: 355 VYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVT 414
            Y++   +  A+++F     K++ SWNA+I G+ Q+     ++    +M+ S + P+  T
Sbjct: 439 SYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFT 498

Query: 415 VSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMS 474
           V S+LSAC++L ++ LGK VH  +     E +++V  +++ +Y  CG +   + LFD M 
Sbjct: 499 VCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAME 558

Query: 475 HKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDE 534
            KS V+WNT+I+GY  +G    AL +F +M+  GI+  G++ + V  ACS    +R G E
Sbjct: 559 DKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGRE 618

Query: 535 IFQSMIHDHGFKPLAEH---YAC-MVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGA 590
                 H +  K L E     AC ++D+  + G + ++ +   GL  E   A W A++  
Sbjct: 619 -----AHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLK-EKSTASWNAMIMG 672

Query: 591 CMIHKDTNLARVASEKLFE 609
             IH    LA+ A  KLFE
Sbjct: 673 YGIH---GLAKEAI-KLFE 687



 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 111/422 (26%), Positives = 199/422 (47%), Gaps = 16/422 (3%)

Query: 133 HAIVSG---YGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCC 189
           H +VSG     +D  +   ++ +Y        +R VFD +  K+   WN++IS   +N  
Sbjct: 107 HQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNEL 166

Query: 190 FQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLT 249
           + + +  F +M+       D  +   V+ A A + ++ +G+ +  L +K G  + V+V  
Sbjct: 167 YDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGN 226

Query: 250 GLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLAS---- 305
            LVSFY   G V  A  LF  +   +L+S N+MI  ++ NG +E S  L  +++      
Sbjct: 227 ALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDG 286

Query: 306 AERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAA 365
           A   + +T+V ++PV      + L   +H + +K  +     +  AL  +YS+   +  A
Sbjct: 287 AFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNA 346

Query: 366 RKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQA--SKVAPNPVTVSSILSACA 423
           + +F  ++ K++ SWN M+ G++  G T     + ++M A    V  + VT+ + +  C 
Sbjct: 347 QMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCF 406

Query: 424 QLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNT 483
               +   K +H     + F  N  V+ A +  YAKCG++  A+ +F  +  K+  +WN 
Sbjct: 407 HESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNA 466

Query: 484 MISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDH 543
           +I G+        +L    +M  SG+ P   T  S+L ACS    +R G E+       H
Sbjct: 467 LIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEV-------H 519

Query: 544 GF 545
           GF
Sbjct: 520 GF 521


>gi|356536005|ref|XP_003536531.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g14850-like [Glycine max]
          Length = 686

 Score =  444 bits (1143), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 267/688 (38%), Positives = 384/688 (55%), Gaps = 16/688 (2%)

Query: 106 PDNFTYSFVLSAASACCDRS--IGVLLHGHAIVSGYGSDL--FVGAALVDLYFKFSWVKS 161
           P N   SF+    SA   RS  +G  +H H I+  + + L  F+   LV++Y K     S
Sbjct: 6   PPNLLGSFL---ESAVLSRSSLLGRAVHAH-ILRTHDTPLPSFLCNHLVNMYSKLDLPNS 61

Query: 162 ARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVA 221
           A+ V      +  V W S+ISG + N  F  ++  F +M R      D T    V  A A
Sbjct: 62  AQLVLSLTNPRTVVTWTSLISGCVHNRRFTSALLHFSNMRRECVLPNDFT-FPCVFKASA 120

Query: 222 EVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNA 281
            +     G ++  L LK G    V+V       YSK G    A  +F ++   +L + NA
Sbjct: 121 SLHMPVTGKQLHALALKGGNILDVFVGCSAFDMYSKTGLRPEARNMFDEMPHRNLATWNA 180

Query: 282 MISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSG 341
            +S    +G+   ++  F++ L      N+ T    +        L L   +H F ++S 
Sbjct: 181 YMSNAVQDGRCLDAIAAFKKFLCVDGEPNAITFCAFLNACADIVSLELGRQLHGFIVRSR 240

Query: 342 IVSNSSVLTALSTVYSRLNEMEAARKLFDE--SSEKSLASWNAMIAGYTQNGLTEEAISL 399
              + SV   L   Y +  ++ ++  +F    S  +++ SW +++A   QN   E A  +
Sbjct: 241 YREDVSVFNGLIDFYGKCGDIVSSELVFSRIGSGRRNVVSWCSLLAALVQNHEEERACMV 300

Query: 400 FQEMQASK-VAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYA 458
           F  +QA K V P    +SS+LSACA+LG + LG+ VH L      E NI+V +AL+D+Y 
Sbjct: 301 F--LQARKEVEPTDFMISSVLSACAELGGLELGRSVHALALKACVEENIFVGSALVDLYG 358

Query: 459 KCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHS--GIRPSGVTF 516
           KCG+I  A ++F  M  ++ VTWN MI GY   G    AL LF EM     GI  S VT 
Sbjct: 359 KCGSIEYAEQVFREMPERNLVTWNAMIGGYAHLGDVDMALSLFQEMTSGSCGIALSYVTL 418

Query: 517 LSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLA 576
           +SVL ACS AG V  G +IF+SM   +G +P AEHYAC+VD+LGR+G +++A EFIK + 
Sbjct: 419 VSVLSACSRAGAVERGLQIFESMRGRYGIEPGAEHYACVVDLLGRSGLVDRAYEFIKRMP 478

Query: 577 VEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAAT 636
           + P  +VWGALLGAC +H  T L ++A+EKLFELDP++ G HV+ SN+ ++   + +A  
Sbjct: 479 ILPTISVWGALLGACKMHGKTKLGKIAAEKLFELDPDDSGNHVVFSNMLASAGRWEEATI 538

Query: 637 VRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTE 696
           VR+ ++   + K  G + + V    HVF + D  H +++ I AML KL G+M++AG+  +
Sbjct: 539 VRKEMRDIGIKKNVGYSWVAVKNRVHVFQAKDSFHEKNSEIQAMLAKLRGEMKKAGYVPD 598

Query: 697 TVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISK 756
              +L D+EEEEK   +  HSEK+A+AFGLI    G  IRI KNLR+C+DCH+A KFISK
Sbjct: 599 ANLSLFDLEEEEKASEVWYHSEKIALAFGLITLPRGVPIRITKNLRICIDCHSAIKFISK 658

Query: 757 VTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           + GR I+VRD NRFH FK G CSC DYW
Sbjct: 659 IVGREIIVRDNNRFHRFKDGWCSCKDYW 686



 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 137/507 (27%), Positives = 244/507 (48%), Gaps = 27/507 (5%)

Query: 3   MKTPQSRNLFLSLLKGAK-TQSQL--TQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCY 59
           M  P+  NL  S L+ A  ++S L     HA I+        +  T L   L +     Y
Sbjct: 1   MNVPRPPNLLGSFLESAVLSRSSLLGRAVHAHIL-------RTHDTPLPSFLCNHLVNMY 53

Query: 60  AR-------ALFFSIPKP-DLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTY 111
           ++        L  S+  P  +  +  +I G  +N    S++  ++++R+   L P++FT+
Sbjct: 54  SKLDLPNSAQLVLSLTNPRTVVTWTSLISGCVHNRRFTSALLHFSNMRRECVL-PNDFTF 112

Query: 112 SFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPE 171
             V  A+++      G  LH  A+  G   D+FVG +  D+Y K      AR +FD+MP 
Sbjct: 113 PCVFKASASLHMPVTGKQLHALALKGGNILDVFVGCSAFDMYSKTGLRPEARNMFDEMPH 172

Query: 172 KDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGME 231
           ++   WN+ +S  +++    D+I  F   +   G   ++ +  A L A A++  L LG +
Sbjct: 173 RNLATWNAYMSNAVQDGRCLDAIAAFKKFLCVDGE-PNAITFCAFLNACADIVSLELGRQ 231

Query: 232 IQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDI--VRPDLISCNAMISGYTCN 289
           +    ++  + + V V  GL+ FY KCG++  +EL+F  I   R +++S  ++++    N
Sbjct: 232 LHGFIVRSRYREDVSVFNGLIDFYGKCGDIVSSELVFSRIGSGRRNVVSWCSLLAALVQN 291

Query: 290 GKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVL 349
            + E +  +F Q     E  +   I  ++      G L L   +H+  LK+ +  N  V 
Sbjct: 292 HEEERACMVFLQARKEVEPTD-FMISSVLSACAELGGLELGRSVHALALKACVEENIFVG 350

Query: 350 TALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASK-- 407
           +AL  +Y +   +E A ++F E  E++L +WNAMI GY   G  + A+SLFQEM +    
Sbjct: 351 SALVDLYGKCGSIEYAEQVFREMPERNLVTWNAMIGGYAHLGDVDMALSLFQEMTSGSCG 410

Query: 408 VAPNPVTVSSILSACAQLGAISLGKWVHELVKSR-NFESNIYVSTALIDMYAKCGNIVEA 466
           +A + VT+ S+LSAC++ GA+  G  + E ++ R   E        ++D+  + G +  A
Sbjct: 411 IALSYVTLVSVLSACSRAGAVERGLQIFESMRGRYGIEPGAEHYACVVDLLGRSGLVDRA 470

Query: 467 RELFDLMSHKSEVT-WNTMISGYGLHG 492
            E    M     ++ W  ++    +HG
Sbjct: 471 YEFIKRMPILPTISVWGALLGACKMHG 497



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 83/329 (25%), Positives = 144/329 (43%), Gaps = 35/329 (10%)

Query: 84  NNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDL 143
           N+E  ++ + F   L+    + P +F  S VLSA +      +G  +H  A+ +    ++
Sbjct: 291 NHEEERACMVF---LQARKEVEPTDFMISSVLSACAELGGLELGRSVHALALKACVEENI 347

Query: 144 FVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRN 203
           FVG+ALVDLY K   ++ A +VF +MPE++ V WN+MI G         ++ +F +M   
Sbjct: 348 FVGSALVDLYGKCGSIEYAEQVFREMPERNLVTWNAMIGGYAHLGDVDMALSLFQEMTSG 407

Query: 204 G-GTWLDSTSVAAVLPAVAEVQELRLGMEI-QCLGLKLGFHDHVYVLTGLVSFYSKCGEV 261
             G  L   ++ +VL A +    +  G++I + +  + G          +V    + G V
Sbjct: 408 SCGIALSYVTLVSVLSACSRAGAVERGLQIFESMRGRYGIEPGAEHYACVVDLLGRSGLV 467

Query: 262 ERA-ELLFRDIVRPDLISCNAMISGYTCNGKTE-----------------SSLRLFRQLL 303
           +RA E + R  + P +    A++     +GKT+                  +  +F  +L
Sbjct: 468 DRAYEFIKRMPILPTISVWGALLGACKMHGKTKLGKIAAEKLFELDPDDSGNHVVFSNML 527

Query: 304 ASAERVNSSTIVGL------IPVFYPFGHLHLTNCIHSFCLKSGI-VSNSSVLTALSTVY 356
           ASA R   +TIV        I     +  + + N +H F  K      NS +   L+ + 
Sbjct: 528 ASAGRWEEATIVRKEMRDIGIKKNVGYSWVAVKNRVHVFQAKDSFHEKNSEIQAMLAKLR 587

Query: 357 SRLNEM----EAARKLFD-ESSEKSLASW 380
             + +     +A   LFD E  EK+   W
Sbjct: 588 GEMKKAGYVPDANLSLFDLEEEEKASEVW 616


>gi|449485565|ref|XP_004157209.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 953

 Score =  444 bits (1143), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 254/728 (34%), Positives = 378/728 (51%), Gaps = 72/728 (9%)

Query: 80  RGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGY 139
           R +     P  +   Y  +  N  L  DN+TY  ++ A S          +H H +  G+
Sbjct: 186 RAYIQTNSPHFAFTLYKSMLSNY-LGADNYTYPLLIQACSIRRSEWEAKQVHNHVLKLGF 244

Query: 140 GSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGD 199
            SD++V   L++ +   S +  A +VF++    D+V WNS+++G ++    +++  ++  
Sbjct: 245 DSDVYVRNTLINCFSVCSNMTDACRVFNESSVLDSVSWNSILAGYIEIGNVEEAKHIYHQ 304

Query: 200 MVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCG 259
           M                                            +     ++  +   G
Sbjct: 305 MPERS----------------------------------------IIASNSMIVLFGMRG 324

Query: 260 EVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIP 319
            V  A  LF +++  D+++ +A+I+ +  N   E ++R F  +      V+    V  + 
Sbjct: 325 LVVEACKLFDEMLEKDMVTWSALIACFQQNEMYEEAIRTFVGMHKIGVMVDEVVAVSALS 384

Query: 320 VFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDES------- 372
                  +++   IHS  LK G  S  ++  AL  +YS+  ++  ARKLFDE+       
Sbjct: 385 ACANLLVVNMGKLIHSLSLKIGTESYINLQNALIYMYSKCGDIMVARKLFDEAYLLDLIS 444

Query: 373 ------------------------SEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKV 408
                                    EK + SW++MI+GY QN L +E ++LFQEMQ S  
Sbjct: 445 WNSMISGYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDETLALFQEMQMSGF 504

Query: 409 APNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARE 468
            P+  T+ S++SACA+L A+  GKWVH  +K      N+ + T LIDMY KCG +  A E
Sbjct: 505 KPDETTLVSVISACARLAALEQGKWVHAYIKRNGLTINVILGTTLIDMYMKCGCVETALE 564

Query: 469 LFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGL 528
           +F  M  K   TWN +I G  ++G    +L +FS M    + P+ +TF+ VL AC H GL
Sbjct: 565 VFYGMIEKGISTWNALILGLAMNGLVESSLDMFSNMKKCHVTPNEITFMGVLGACRHMGL 624

Query: 529 VREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALL 588
           V EG   F SMIHDH  +P  +HY CMVD+LGRAG+L++A E +  + + P  A WGALL
Sbjct: 625 VDEGQHHFYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQEAEELLNRMPMTPDVATWGALL 684

Query: 589 GACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAK 648
           GAC  H D+ + R    KL EL P++ G+HVLLSNIY+++  +     +R ++ K ++ K
Sbjct: 685 GACKKHGDSEMGRRVGRKLIELQPDHDGFHVLLSNIYASKGKWDDVLEIRGMMTKHRVLK 744

Query: 649 APGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEE 708
            PGC++IE  G  H F +GD+ HP   AI  ML ++  K++  G+  +    L DV+EEE
Sbjct: 745 IPGCSMIEANGVIHEFLAGDKTHPDMDAIEDMLVEMAMKLKLEGYTPDINEVLLDVDEEE 804

Query: 709 KELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDAN 768
           KE  +  HSEKLAIAFGLI   P T IRI+KNLR+C DCHTA K ISK   R IVVRD +
Sbjct: 805 KESTLFRHSEKLAIAFGLINISPPTPIRIMKNLRICNDCHTAAKLISKAFCRKIVVRDRH 864

Query: 769 RFHHFKGG 776
           RFHHF+ G
Sbjct: 865 RFHHFEQG 872



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 95/372 (25%), Positives = 166/372 (44%), Gaps = 49/372 (13%)

Query: 63  LFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACC 122
           LF  + + D+  ++ +I  F  NEM + +I  +  + K   +  +       +SA SAC 
Sbjct: 332 LFDEMLEKDMVTWSALIACFQQNEMYEEAIRTFVGMHKIGVMVDE----VVAVSALSACA 387

Query: 123 DR---SIGVLLHGHAIVSGYGS----------------------DLFVGAALVDL----- 152
           +    ++G L+H  ++  G  S                       LF  A L+DL     
Sbjct: 388 NLLVVNMGKLIHSLSLKIGTESYINLQNALIYMYSKCGDIMVARKLFDEAYLLDLISWNS 447

Query: 153 ----YFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWL 208
               Y K + V +A+ +FD MPEKD V W+SMISG  +N  F +++ +F +M  +G    
Sbjct: 448 MISGYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDETLALFQEMQMSGFK-P 506

Query: 209 DSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLF 268
           D T++ +V+ A A +  L  G  +     + G   +V + T L+  Y KCG VE A  +F
Sbjct: 507 DETTLVSVISACARLAALEQGKWVHAYIKRNGLTINVILGTTLIDMYMKCGCVETALEVF 566

Query: 269 RDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPV-----FYP 323
             ++   + + NA+I G   NG  ESSL +F  +       N  T +G++          
Sbjct: 567 YGMIEKGISTWNALILGLAMNGLVESSLDMFSNMKKCHVTPNEITFMGVLGACRHMGLVD 626

Query: 324 FGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDE-SSEKSLASWNA 382
            G  H  + IH   ++  +     ++  L     R  +++ A +L +       +A+W A
Sbjct: 627 EGQHHFYSMIHDHKIQPNVKHYGCMVDLL----GRAGKLQEAEELLNRMPMTPDVATWGA 682

Query: 383 MIAGYTQNGLTE 394
           ++    ++G +E
Sbjct: 683 LLGACKKHGDSE 694



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 64/255 (25%), Positives = 120/255 (47%), Gaps = 22/255 (8%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           A+A+F S+P+ D+  ++ +I G++ N++   ++  +  ++  +   PD  T   V+SA +
Sbjct: 461 AKAIFDSMPEKDVVSWSSMISGYAQNDLFDETLALFQEMQM-SGFKPDETTLVSVISACA 519

Query: 120 ACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNS 179
                  G  +H +   +G   ++ +G  L+D+Y K   V++A +VF  M EK    WN+
Sbjct: 520 RLAALEQGKWVHAYIKRNGLTINVILGTTLIDMYMKCGCVETALEVFYGMIEKGISTWNA 579

Query: 180 MISGLMKNCCFQDSIWVFGDMVR-----NGGTWLDSTSVAAVLPAVAEVQELRLGMEIQC 234
           +I GL  N   + S+ +F +M +     N  T++        +  V E Q     M    
Sbjct: 580 LILGLAMNGLVESSLDMFSNMKKCHVTPNEITFMGVLGACRHMGLVDEGQHHFYSM---- 635

Query: 235 LGLKLGFHDH-----VYVLTGLVSFYSKCGEVERA-ELLFRDIVRPDLISCNAMISGYTC 288
                  HDH     V     +V    + G+++ A ELL R  + PD+ +  A++     
Sbjct: 636 ------IHDHKIQPNVKHYGCMVDLLGRAGKLQEAEELLNRMPMTPDVATWGALLGACKK 689

Query: 289 NGKTESSLRLFRQLL 303
           +G +E   R+ R+L+
Sbjct: 690 HGDSEMGRRVGRKLI 704


>gi|449439619|ref|XP_004137583.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g74630-like [Cucumis sativus]
 gi|449487109|ref|XP_004157499.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g74630-like [Cucumis sativus]
          Length = 642

 Score =  444 bits (1143), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 232/625 (37%), Positives = 360/625 (57%), Gaps = 42/625 (6%)

Query: 162 ARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVA 221
           AR++F  +   D  ++N++I GL  +    +++ +F +M R      DS S A +L A A
Sbjct: 58  ARRLFLDIRNPDVFMYNTLIRGLSDSDTPSNALQLFVEMRRKSVALPDSFSFAFLLKAAA 117

Query: 222 EVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNA 281
             + L  G+++ CL +  G   H++V T L+S Y++C  +  A  +F +++ P++++ NA
Sbjct: 118 NCRALTNGLQLHCLAVGYGLDSHLFVGTTLISMYAECACLVFARKVFDEMIEPNIVAWNA 177

Query: 282 MISG-YTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKS 340
           +++  + C G  ++  ++FR                                    C+  
Sbjct: 178 IVAACFRCEGVKDAE-QVFR------------------------------------CMP- 199

Query: 341 GIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLF 400
             + N +    +   Y++  E++ AR++F +   K   SW+ MI G+  NG   +A + F
Sbjct: 200 --IRNLTSWNIMLAGYTKAGELQLAREVFMKMPLKDDVSWSTMIVGFAHNGNFNDAFAFF 257

Query: 401 QEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKC 460
           +E++   + PN V+++ +LSACAQ GA   G+ +H  V+   F   I V+ ALID Y+KC
Sbjct: 258 REVRREGMRPNEVSLTGVLSACAQAGAFEFGRILHGFVEKSGFLQIISVNNALIDTYSKC 317

Query: 461 GNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVL 520
           GN+  AR +FD M  +S V+W  MI+G  +HG+G EA++LF+EM  S I+P  +TF+S+L
Sbjct: 318 GNLDMARLVFDNMLRRSAVSWTAMIAGMAMHGYGEEAIRLFNEMEESNIKPDSITFISIL 377

Query: 521 YACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPG 580
           YACSHAGLV  G   F  M++ +G +P+ EHY CMVD+ GRAG+L++A +F+  + + P 
Sbjct: 378 YACSHAGLVDLGCSYFSRMVNTYGIEPVIEHYGCMVDLYGRAGKLQQAYDFVCQMPISPN 437

Query: 581 PAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQV 640
             VW  LLGAC IH +  LA     +L ELDPEN G HVLLSNIY+    +   A +R+ 
Sbjct: 438 DIVWRTLLGACSIHGNLYLAGQVKRQLSELDPENSGDHVLLSNIYAVAGKWKDVAALRRS 497

Query: 641 VKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMR-EAGFQTETVT 699
           +  ++L K PG ++IEV    + F +G++ +  +   +  L ++  ++R E G+  E  +
Sbjct: 498 MTHQRLKKTPGWSMIEVNRIIYSFVAGEKQNDIAVEAHQKLREIMSRLRIEGGYVPEVGS 557

Query: 700 ALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTG 759
            LHD+E EEKE  +  HSEKLA+AFG+     G  IR++KNLR+C DCHT  K ISKV  
Sbjct: 558 VLHDIEVEEKEDSVSQHSEKLAVAFGMAKLPRGRAIRVVKNLRICRDCHTVMKLISKVYE 617

Query: 760 RVIVVRDANRFHHFKGGVCSCGDYW 784
             IVVRD +RFH F  G CSC DYW
Sbjct: 618 VEIVVRDRSRFHSFTHGSCSCRDYW 642



 Score =  221 bits (562), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 141/487 (28%), Positives = 237/487 (48%), Gaps = 47/487 (9%)

Query: 59  YARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAA 118
           YAR LF  I  PD+F++N +IRG S+++ P +++  +  +R+ +   PD+F+++F+L AA
Sbjct: 57  YARRLFLDIRNPDVFMYNTLIRGLSDSDTPSNALQLFVEMRRKSVALPDSFSFAFLLKAA 116

Query: 119 SACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWN 178
           + C   + G+ LH  A+  G  S LFVG  L+ +Y + + +  ARKVFD+M E + V WN
Sbjct: 117 ANCRALTNGLQLHCLAVGYGLDSHLFVGTTLISMYAECACLVFARKVFDEMIEPNIVAWN 176

Query: 179 SMISGLMKNCCFQDSIWVFGDM-VRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGL 237
           ++++   +    +D+  VF  M +RN  +W                              
Sbjct: 177 AIVAACFRCEGVKDAEQVFRCMPIRNLTSW------------------------------ 206

Query: 238 KLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLR 297
                        +++ Y+K GE++ A  +F  +   D +S + MI G+  NG    +  
Sbjct: 207 -----------NIMLAGYTKAGELQLAREVFMKMPLKDDVSWSTMIVGFAHNGNFNDAFA 255

Query: 298 LFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYS 357
            FR++     R N  ++ G++      G       +H F  KSG +   SV  AL   YS
Sbjct: 256 FFREVRREGMRPNEVSLTGVLSACAQAGAFEFGRILHGFVEKSGFLQIISVNNALIDTYS 315

Query: 358 RLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSS 417
           +   ++ AR +FD    +S  SW AMIAG   +G  EEAI LF EM+ S + P+ +T  S
Sbjct: 316 KCGNLDMARLVFDNMLRRSAVSWTAMIAGMAMHGYGEEAIRLFNEMEESNIKPDSITFIS 375

Query: 418 ILSACAQLGAISLG-KWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMS-H 475
           IL AC+  G + LG  +   +V +   E  I     ++D+Y + G + +A +    M   
Sbjct: 376 ILYACSHAGLVDLGCSYFSRMVNTYGIEPVIEHYGCMVDLYGRAGKLQQAYDFVCQMPIS 435

Query: 476 KSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGV-TFLSVLYACSHAGLVREGDE 534
            +++ W T++    +HG+   A Q+  ++       SG    LS +YA   AG  ++   
Sbjct: 436 PNDIVWRTLLGACSIHGNLYLAGQVKRQLSELDPENSGDHVLLSNIYAV--AGKWKDVAA 493

Query: 535 IFQSMIH 541
           + +SM H
Sbjct: 494 LRRSMTH 500



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 75/331 (22%), Positives = 128/331 (38%), Gaps = 72/331 (21%)

Query: 327 LHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAG 386
           L    C++S+ L SG +        L    +  + +  AR+LF +     +  +N +I G
Sbjct: 27  LIFKTCLNSYPLVSGKL-------LLHCAVTLPDSLHYARRLFLDIRNPDVFMYNTLIRG 79

Query: 387 YTQNGLTEEAISLFQEMQASKVA-PNPVTVSSILSACAQLGAISLGKWVHELVKSRNFES 445
            + +     A+ LF EM+   VA P+  + + +L A A   A++ G  +H L      +S
Sbjct: 80  LSDSDTPSNALQLFVEMRRKSVALPDSFSFAFLLKAAANCRALTNGLQLHCLAVGYGLDS 139

Query: 446 NIYVSTALIDMYAKCGNIVEARELFDLMSHKSEV-------------------------- 479
           +++V T LI MYA+C  +V AR++FD M   + V                          
Sbjct: 140 HLFVGTTLISMYAECACLVFARKVFDEMIEPNIVAWNAIVAACFRCEGVKDAEQVFRCMP 199

Query: 480 -----TWNTMISGYGLHGHGLEALQLFSEM------------------------------ 504
                +WN M++GY   G    A ++F +M                              
Sbjct: 200 IRNLTSWNIMLAGYTKAGELQLAREVFMKMPLKDDVSWSTMIVGFAHNGNFNDAFAFFRE 259

Query: 505 -LHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAG 563
               G+RP+ V+   VL AC+ AG    G  I    +   GF  +      ++D   + G
Sbjct: 260 VRREGMRPNEVSLTGVLSACAQAGAFEFG-RILHGFVEKSGFLQIISVNNALIDTYSKCG 318

Query: 564 QLEKALEFIKGLAVEPGPAVWGALLGACMIH 594
            L+ A      + +      W A++    +H
Sbjct: 319 NLDMARLVFDNM-LRRSAVSWTAMIAGMAMH 348


>gi|15239979|ref|NP_201453.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171133|sp|Q9FJY7.1|PP449_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g66520
 gi|10177533|dbj|BAB10928.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|332010841|gb|AED98224.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 620

 Score =  444 bits (1143), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 237/605 (39%), Positives = 345/605 (57%), Gaps = 38/605 (6%)

Query: 215 AVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSF---YSKCGEVERAELLFRDI 271
           + L   ++ +EL+   +I    LK G     Y +T  +SF    +    +  A+++F   
Sbjct: 19  SCLQRCSKQEELK---QIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGF 75

Query: 272 VRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTN 331
            RPD    N MI G++C+ + E SL L++++L S+   N+ T   L+           T 
Sbjct: 76  DRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETT 135

Query: 332 CIHSFCLKSGIVSNSSVLTALSTVYS-------------------------------RLN 360
            IH+   K G  ++   + +L   Y+                               +  
Sbjct: 136 QIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAG 195

Query: 361 EMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILS 420
           +M+ A  LF + +EK+  SW  MI+GY Q  + +EA+ LF EMQ S V P+ V++++ LS
Sbjct: 196 KMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALS 255

Query: 421 ACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVT 480
           ACAQLGA+  GKW+H  +       +  +   LIDMYAKCG + EA E+F  +  KS   
Sbjct: 256 ACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQA 315

Query: 481 WNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMI 540
           W  +ISGY  HGHG EA+  F EM   GI+P+ +TF +VL ACS+ GLV EG  IF SM 
Sbjct: 316 WTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSME 375

Query: 541 HDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLA 600
            D+  KP  EHY C+VD+LGRAG L++A  FI+ + ++P   +WGALL AC IHK+  L 
Sbjct: 376 RDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELG 435

Query: 601 RVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGT 660
               E L  +DP + G +V  +NI++ ++ + +AA  R+++K++ +AK PGC+ I + GT
Sbjct: 436 EEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISLEGT 495

Query: 661 PHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHD-VEEEEKELMMKVHSEK 719
            H F +GD+ HP+   I +    +  K+ E G+  E    L D V+++E+E ++  HSEK
Sbjct: 496 THEFLAGDRSHPEIEKIQSKWRIMRRKLEENGYVPELEEMLLDLVDDDEREAIVHQHSEK 555

Query: 720 LAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCS 779
           LAI +GLI T+PGT IRI+KNLRVC DCH  TK ISK+  R IV+RD  RFHHF+ G CS
Sbjct: 556 LAITYGLIKTKPGTIIRIMKNLRVCKDCHKVTKLISKIYKRDIVMRDRTRFHHFRDGKCS 615

Query: 780 CGDYW 784
           CGDYW
Sbjct: 616 CGDYW 620



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 97/364 (26%), Positives = 173/364 (47%), Gaps = 36/364 (9%)

Query: 162 ARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVA 221
           A+ VFD     DT LWN MI G   +   + S+ ++  M+ +     ++ +  ++L A +
Sbjct: 68  AQIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPH-NAYTFPSLLKACS 126

Query: 222 EVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNA 281
            +       +I     KLG+ + VY +  L++ Y+  G  + A LLF  I  PD +S N+
Sbjct: 127 NLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNS 186

Query: 282 MISGYTCNGKTESSLRLFRQLLASAERVNSSTIVG----------LIPVFYP-------- 323
           +I GY   GK + +L LFR+ +A    ++ +T++            + +F+         
Sbjct: 187 VIKGYVKAGKMDIALTLFRK-MAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEP 245

Query: 324 --------------FGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLF 369
                          G L     IHS+  K+ I  +S +   L  +Y++  EME A ++F
Sbjct: 246 DNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVF 305

Query: 370 DESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAIS 429
               +KS+ +W A+I+GY  +G   EAIS F EMQ   + PN +T +++L+AC+  G + 
Sbjct: 306 KNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVE 365

Query: 430 LGKWV-HELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHK-SEVTWNTMISG 487
            GK + + + +  N +  I     ++D+  + G + EA+     M  K + V W  ++  
Sbjct: 366 EGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKA 425

Query: 488 YGLH 491
             +H
Sbjct: 426 CRIH 429



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 128/506 (25%), Positives = 217/506 (42%), Gaps = 87/506 (17%)

Query: 10  NLF--LSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTK-----LAHRLSDFKATCYARA 62
           NL+  +S L+    Q +L Q HA+++  G   D   +TK     ++   SDF    YA+ 
Sbjct: 13  NLYETMSCLQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLP--YAQI 70

Query: 63  LFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDN-FTYSFVLSAASAC 121
           +F    +PD FL+N++IRGFS ++ P+ S+  Y  +  ++A  P N +T+  +L A S  
Sbjct: 71  VFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSA--PHNAYTFPSLLKACSNL 128

Query: 122 CDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMI 181
                   +H      GY +D++   +L++ Y      K A  +FD++PE D V WNS+I
Sbjct: 129 SAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVI 188

Query: 182 SGLMKNCCFQDSIWVFGDMV-RNGGTWL-----------------------------DST 211
            G +K      ++ +F  M  +N  +W                              D+ 
Sbjct: 189 KGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNV 248

Query: 212 SVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDI 271
           S+A  L A A++  L  G  I     K        +   L+  Y+KCGE+E A  +F++I
Sbjct: 249 SLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNI 308

Query: 272 VRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTN 331
            +  + +  A+ISGY  +G    ++  F ++                             
Sbjct: 309 KKKSVQAWTALISGYAYHGHGREAISKFMEM----------------------------- 339

Query: 332 CIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLF-----DESSEKSLASWNAMIAG 386
                 +K  +++ ++VLTA S  Y+ L  +E  + +F     D + + ++  +  ++  
Sbjct: 340 --QKMGIKPNVITFTAVLTACS--YTGL--VEEGKLIFYSMERDYNLKPTIEHYGCIVDL 393

Query: 387 YTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHE-LVKSRNFES 445
             + GL +EA    QEM    + PN V   ++L AC     I LG+ + E L+    +  
Sbjct: 394 LGRAGLLDEAKRFIQEM---PLKPNAVIWGALLKACRIHKNIELGEEIGEILIAIDPYHG 450

Query: 446 NIYVSTALID-MYAKCGNIVEARELF 470
             YV  A I  M  K     E R L 
Sbjct: 451 GRYVHKANIHAMDKKWDKAAETRRLM 476



 Score = 69.7 bits (169), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 58/233 (24%), Positives = 99/233 (42%), Gaps = 35/233 (15%)

Query: 6   PQSRNLFLSLLKGAKTQS---QLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARA 62
           P +   F SLLK     S   + TQ HAQI   G++ND+  V  L +  +       A  
Sbjct: 112 PHNAYTFPSLLKACSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHL 171

Query: 63  LFFSIPKPDLFLFNVIIRGFS-------------------------------NNEMPKSS 91
           LF  IP+PD   +N +I+G+                                  +M K +
Sbjct: 172 LFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEA 231

Query: 92  ICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVD 151
           +  + H  +N+ + PDN + +  LSA +       G  +H +   +    D  +G  L+D
Sbjct: 232 LQLF-HEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLID 290

Query: 152 LYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNG 204
           +Y K   ++ A +VF  + +K    W ++ISG   +   +++I  F +M + G
Sbjct: 291 MYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMG 343


>gi|449480302|ref|XP_004155856.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Cucumis sativus]
          Length = 654

 Score =  444 bits (1143), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 221/627 (35%), Positives = 373/627 (59%), Gaps = 1/627 (0%)

Query: 159 VKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLP 218
           V  A  VF      D + WNSM+   + +   + ++  + +M+       D  +  ++L 
Sbjct: 28  VGYAYSVFAHTRVLDVLTWNSMLRAFVNSNMPRRALQSYTEMLERSRNVPDRFTFPSLLK 87

Query: 219 AVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLIS 278
             A + E ++G  +    +K   H  +Y+ T L++ Y+ CG+++ A  LF  +   + + 
Sbjct: 88  GCALLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVV 147

Query: 279 CNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCL 338
             +MISGY  N     +L L++++       +  T+  L+        L +   +HS   
Sbjct: 148 WTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIR 207

Query: 339 KSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAIS 398
           +  +   + + +AL  +Y++  +++ AR++FD+ S+K + +W+A+I GY +N  + EA+ 
Sbjct: 208 EMDMKICAVLGSALVNMYAKCGDLKTARQVFDQLSDKDVYAWSALIFGYVKNNRSTEALQ 267

Query: 399 LFQEMQA-SKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMY 457
           LF+E+   S + PN VT+ +++SACAQLG +  G+WVH+ +       ++ ++ +LIDM+
Sbjct: 268 LFREVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDMF 327

Query: 458 AKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFL 517
           +KCG+I  A+ +FD MS+K  ++WN+M++G  LHG G EAL  F  M  + ++P  +TF+
Sbjct: 328 SKCGDIDAAKRIFDSMSYKDLISWNSMVNGLALHGLGREALAQFHLMQTTDLQPDEITFI 387

Query: 518 SVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAV 577
            VL ACSHAGLV+EG ++F  +   +G +  +EHY CMVD+L RAG L +A EFI+ + +
Sbjct: 388 GVLTACSHAGLVQEGKKLFYEIEALYGVRLKSEHYGCMVDLLCRAGLLAEAREFIRVMPL 447

Query: 578 EPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATV 637
           +P  A+WG++LGAC ++ +  L   A+  L EL+P N G ++LLSNIY+  + + +   V
Sbjct: 448 QPDGAIWGSMLGACRVYNNLELGEEAARCLLELEPTNDGVYILLSNIYARRKMWNEVKKV 507

Query: 638 RQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTET 697
           R+++ ++ + K PGC+ + +    H F +GD  HP+   I  ML ++  K++  G+  +T
Sbjct: 508 RELMNEKGIQKTPGCSSVVIDNIAHSFLAGDCSHPEIAEISIMLRQVREKLKLVGYVADT 567

Query: 698 VTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKV 757
              L ++++ +KE  +  HSEKLA+ +GL+ +E G  I I+KNLRVC DCHT  K +SK+
Sbjct: 568 SEVLLNIDDNKKEESVSQHSEKLALCYGLLKSEIGGRIVILKNLRVCSDCHTLIKLVSKI 627

Query: 758 TGRVIVVRDANRFHHFKGGVCSCGDYW 784
             R I +RD NRFHHFK G CSC DYW
Sbjct: 628 YQRQITLRDRNRFHHFKDGSCSCRDYW 654



 Score =  217 bits (552), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 129/461 (27%), Positives = 250/461 (54%), Gaps = 10/461 (2%)

Query: 32  IIIHGFQNDLSTVTKL-AHRLS-DFKATCYARALFFSIPKPDLFLFNVIIRGFSNNEMPK 89
           +++ GF +   ++ KL AH LS       YA ++F      D+  +N ++R F N+ MP+
Sbjct: 1   MVVTGFIHHKPSLNKLIAHVLSMGSLGVGYAYSVFAHTRVLDVLTWNSMLRAFVNSNMPR 60

Query: 90  SSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAAL 149
            ++  YT + + +   PD FT+  +L   +   +  +G +LHG  +     SDL++   L
Sbjct: 61  RALQSYTEMLERSRNVPDRFTFPSLLKGCALLLEFKVGKVLHGQVVKYMLHSDLYIETTL 120

Query: 150 VDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLD 209
           +++Y     +KSAR +F++M  ++ V+W SMISG MKN C  +++ ++  M  +G +  D
Sbjct: 121 LNMYAACGDLKSARFLFERMGHRNKVVWTSMISGYMKNHCPNEALLLYKKMEEDGFS-PD 179

Query: 210 STSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFR 269
             ++A ++ A AE+++L +GM++     ++       + + LV+ Y+KCG+++ A  +F 
Sbjct: 180 EVTMATLVSACAELKDLGVGMKLHSHIREMDMKICAVLGSALVNMYAKCGDLKTARQVFD 239

Query: 270 DIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAE-RVNSSTIVGLIPVFYPFGHLH 328
            +   D+ + +A+I GY  N ++  +L+LFR++   +  R N  TI+ +I      G L 
Sbjct: 240 QLSDKDVYAWSALIFGYVKNNRSTEALQLFREVAGGSNMRPNEVTILAVISACAQLGDLE 299

Query: 329 LTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYT 388
               +H +  ++    + S+  +L  ++S+  +++AA+++FD  S K L SWN+M+ G  
Sbjct: 300 TGRWVHDYITRTQKGHSVSLNNSLIDMFSKCGDIDAAKRIFDSMSYKDLISWNSMVNGLA 359

Query: 389 QNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGK---WVHELVKSRNFES 445
            +GL  EA++ F  MQ + + P+ +T   +L+AC+  G +  GK   +  E +     +S
Sbjct: 360 LHGLGREALAQFHLMQTTDLQPDEITFIGVLTACSHAGLVQEGKKLFYEIEALYGVRLKS 419

Query: 446 NIYVSTALIDMYAKCGNIVEARELFDLMSHKSE-VTWNTMI 485
             Y    ++D+  + G + EARE   +M  + +   W +M+
Sbjct: 420 EHY--GCMVDLLCRAGLLAEAREFIRVMPLQPDGAIWGSML 458



 Score =  120 bits (300), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 113/479 (23%), Positives = 215/479 (44%), Gaps = 45/479 (9%)

Query: 7   QSRNL-----FLSLLKGAKTQSQLTQ---THAQIIIHGFQNDLSTVTKLAHRLSDFKATC 58
           +SRN+     F SLLKG     +       H Q++ +   +DL   T L +  +      
Sbjct: 72  RSRNVPDRFTFPSLLKGCALLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLK 131

Query: 59  YARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAA 118
            AR LF  +   +  ++  +I G+  N  P  ++  Y  + ++   +PD  T + ++SA 
Sbjct: 132 SARFLFERMGHRNKVVWTSMISGYMKNHCPNEALLLYKKMEED-GFSPDEVTMATLVSAC 190

Query: 119 SACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWN 178
           +   D  +G+ LH H           +G+ALV++Y K   +K+AR+VFD++ +KD   W+
Sbjct: 191 AELKDLGVGMKLHSHIREMDMKICAVLGSALVNMYAKCGDLKTARQVFDQLSDKDVYAWS 250

Query: 179 SMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLK 238
           ++I G +KN    +++ +F ++        +  ++ AV+ A A++ +L  G  +     +
Sbjct: 251 ALIFGYVKNNRSTEALQLFREVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITR 310

Query: 239 LGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRL 298
                 V +   L+  +SKCG+++ A+ +F  +   DLIS N+M++G   +G    +L  
Sbjct: 311 TQKGHSVSLNNSLIDMFSKCGDIDAAKRIFDSMSYKDLISWNSMVNGLALHGLGREALAQ 370

Query: 299 FRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSR 358
           F  +  +  + +  T +G+           LT C H     +G+V     L         
Sbjct: 371 FHLMQTTDLQPDEITFIGV-----------LTACSH-----AGLVQEGKKL--------- 405

Query: 359 LNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSI 418
             E+EA   +  +S       +  M+    + GL  EA    + M    + P+     S+
Sbjct: 406 FYEIEALYGVRLKSEH-----YGCMVDLLCRAGLLAEAREFIRVM---PLQPDGAIWGSM 457

Query: 419 LSACAQLGAISLGKWVHE-LVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHK 476
           L AC     + LG+     L++       +Y+   L ++YA+     E +++ +LM+ K
Sbjct: 458 LGACRVYNNLELGEEAARCLLELEPTNDGVYI--LLSNIYARRKMWNEVKKVRELMNEK 514


>gi|359476777|ref|XP_002278837.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
            repeat-containing protein At3g23330 [Vitis vinifera]
          Length = 1008

 Score =  444 bits (1143), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 241/686 (35%), Positives = 390/686 (56%), Gaps = 48/686 (6%)

Query: 146  GAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGG 205
            G  L++LY K   ++ A K+F+++P+ D   W  +ISG  +     D + +F  M ++ G
Sbjct: 324  GNHLLNLYAKSQNLEQAHKMFEEIPQTDVFSWTVLISGFARIGLSADVLGLFTKM-QDQG 382

Query: 206  TWLDSTSVAAVLPAVA-EVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERA 264
               +  +++ VL + +  V + R+G  I    L+ G      +   ++ +Y KC     A
Sbjct: 383  VCPNQFTLSIVLKSCSSNVNDSRIGKGIHGWILRNGLDLDAVLNNSILDYYVKCRCFGYA 442

Query: 265  ELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLI------ 318
            E LF  +   D +S N M+S Y   G  + S+ LFRQL        ++ I GL+      
Sbjct: 443  EKLFGLMAEKDTVSWNIMMSSYLQIGDMQKSVDLFRQLPGKDAASWNTMIDGLMRNGCER 502

Query: 319  -------------PVFYPFGH------------LHLTNCIHSFCLKSGIVSNSSVLTALS 353
                         P F                 L L   IH+  LK G++ +  V  +L 
Sbjct: 503  VALELLYKMVAAGPAFNKLTFSIALVLASSLSVLGLGKQIHTQVLKVGVLDDGFVRNSLI 562

Query: 354  TVYSRLNEMEAARKLF------------DESSEKSLA---SWNAMIAGYTQNGLTEEAIS 398
             +Y +  EME A  +F            +ES + ++    SW++M++GY QNG  E+A+ 
Sbjct: 563  DMYCKCGEMEKASVIFKHLPQESSMMNSEESCDDAVVESVSWSSMVSGYVQNGRFEDALK 622

Query: 399  LFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYA 458
             F  M  S+V  +  T++S++SACA  G + LG+ VH  ++      ++++ +++IDMY 
Sbjct: 623  TFSFMICSQVEVDKFTLTSVVSACASAGVLELGRQVHGYIQKIGHGLDVFLGSSIIDMYV 682

Query: 459  KCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLS 518
            KCG++ +A  +F+    ++ V W +MISG  LHG G EA++LF  M++ GI P+ V+F+ 
Sbjct: 683  KCGSLNDAWLIFNQAKDRNVVLWTSMISGCALHGQGREAVRLFELMINEGITPNEVSFVG 742

Query: 519  VLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVE 578
            VL ACSHAGL+ EG + F+ M   +G +P AEH+ CMVD+ GRAG+L +  EFI   A+ 
Sbjct: 743  VLTACSHAGLLEEGCKYFRLMREVYGIRPGAEHFTCMVDLYGRAGRLNEIKEFIHNNAIS 802

Query: 579  PGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVR 638
               +VW + L +C +HK+  +     +KL EL+P + G ++L S+I + E  + +AA +R
Sbjct: 803  KLSSVWRSFLSSCRVHKNIEMGIWVCKKLLELEPFDAGPYILFSSICATEHRWEEAAKIR 862

Query: 639  QVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETV 698
             ++++R + K P  + I++    H F  GD+ HPQ T IY+ L++L G+++E G+ T+  
Sbjct: 863  SLMQQRGVKKNPSQSWIQLKNQVHSFVMGDRSHPQDTKIYSYLDELIGRLKEIGYSTDVT 922

Query: 699  TALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVT 758
              + DVE+E++++++  HSEKLAIA+G+I+T PGT IR++KNLRVC+DCH   K+ S++ 
Sbjct: 923  PVMQDVEQEQRQVLLGYHSEKLAIAYGIISTAPGTPIRVMKNLRVCIDCHNFIKYASELL 982

Query: 759  GRVIVVRDANRFHHFKGGVCSCGDYW 784
            GR I++RD +RFHHFK G CSC DYW
Sbjct: 983  GREIIIRDIHRFHHFKHGHCSCADYW 1008



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 128/483 (26%), Positives = 226/483 (46%), Gaps = 55/483 (11%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVL-SAA 118
           A  +F  IP+ D+F + V+I GF+   +    +  +T + ++  + P+ FT S VL S +
Sbjct: 340 AHKMFEEIPQTDVFSWTVLISGFARIGLSADVLGLFTKM-QDQGVCPNQFTLSIVLKSCS 398

Query: 119 SACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVL-- 176
           S   D  IG  +HG  + +G   D  +  +++D Y K      A K+F  M EKDTV   
Sbjct: 399 SNVNDSRIGKGIHGWILRNGLDLDAVLNNSILDYYVKCRCFGYAEKLFGLMAEKDTVSWN 458

Query: 177 -----------------------------WNSMISGLMKNCCFQDSIWVFGDMVRNGGTW 207
                                        WN+MI GLM+N C + ++ +   MV  G  +
Sbjct: 459 IMMSSYLQIGDMQKSVDLFRQLPGKDAASWNTMIDGLMRNGCERVALELLYKMVAAGPAF 518

Query: 208 LDST-SVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAEL 266
              T S+A VL +   V  L LG +I    LK+G  D  +V   L+  Y KCGE+E+A +
Sbjct: 519 NKLTFSIALVLASSLSV--LGLGKQIHTQVLKVGVLDDGFVRNSLIDMYCKCGEMEKASV 576

Query: 267 LFR---------------DIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNS 311
           +F+               D    + +S ++M+SGY  NG+ E +L+ F  ++ S   V+ 
Sbjct: 577 IFKHLPQESSMMNSEESCDDAVVESVSWSSMVSGYVQNGRFEDALKTFSFMICSQVEVDK 636

Query: 312 STIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDE 371
            T+  ++      G L L   +H +  K G   +  + +++  +Y +   +  A  +F++
Sbjct: 637 FTLTSVVSACASAGVLELGRQVHGYIQKIGHGLDVFLGSSIIDMYVKCGSLNDAWLIFNQ 696

Query: 372 SSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLG 431
           + ++++  W +MI+G   +G   EA+ LF+ M    + PN V+   +L+AC+  G +  G
Sbjct: 697 AKDRNVVLWTSMISGCALHGQGREAVRLFELMINEGITPNEVSFVGVLTACSHAGLLEEG 756

Query: 432 -KWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELF--DLMSHKSEVTWNTMISGY 488
            K+   + +           T ++D+Y + G + E +E    + +S  S V W + +S  
Sbjct: 757 CKYFRLMREVYGIRPGAEHFTCMVDLYGRAGRLNEIKEFIHNNAISKLSSV-WRSFLSSC 815

Query: 489 GLH 491
            +H
Sbjct: 816 RVH 818



 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 73/285 (25%), Positives = 131/285 (45%), Gaps = 43/285 (15%)

Query: 330 TNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQ 389
           +  +H+  +K+G V        L  +Y++   +E A K+F+E  +  + SW  +I+G+ +
Sbjct: 307 SEVLHAKLIKNGCVGIRG--NHLLNLYAKSQNLEQAHKMFEEIPQTDVFSWTVLISGFAR 364

Query: 390 NGLTEEAISLFQEMQASKVAPNPVTVSSILSAC-AQLGAISLGKWVHELVKSRNFESNIY 448
            GL+ + + LF +MQ   V PN  T+S +L +C + +    +GK +H  +     + +  
Sbjct: 365 IGLSADVLGLFTKMQDQGVCPNQFTLSIVLKSCSSNVNDSRIGKGIHGWILRNGLDLDAV 424

Query: 449 VSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGY-------------------- 488
           ++ +++D Y KC     A +LF LM+ K  V+WN M+S Y                    
Sbjct: 425 LNNSILDYYVKCRCFGYAEKLFGLMAEKDTVSWNIMMSSYLQIGDMQKSVDLFRQLPGKD 484

Query: 489 ---------GLHGHGLE--ALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQ 537
                    GL  +G E  AL+L  +M+ +G   + +TF   L   S   ++  G +I  
Sbjct: 485 AASWNTMIDGLMRNGCERVALELLYKMVAAGPAFNKLTFSIALVLASSLSVLGLGKQIHT 544

Query: 538 SMIH----DHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVE 578
            ++     D GF         ++D+  + G++EKA    K L  E
Sbjct: 545 QVLKVGVLDDGFVR-----NSLIDMYCKCGEMEKASVIFKHLPQE 584


>gi|359486044|ref|XP_002269662.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g49142-like [Vitis vinifera]
          Length = 689

 Score =  444 bits (1142), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 238/617 (38%), Positives = 354/617 (57%), Gaps = 48/617 (7%)

Query: 211 TSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRD 270
           +S A +   +     ++LG +     +  G   + ++   +V+ Y+  G+++ A ++F  
Sbjct: 78  SSYAPIFQFLTRHNFIKLGQQAHAQIVLHGLQPNAFLAAKMVAMYASSGDLDSAVVVFDR 137

Query: 271 IVRPDLISCNAMISGYTCNGKT-------ESSLRL-FRQLLASAERVNSSTIVGLIPVFY 322
           I  P  +  N++I  YT +G         E+  R+ F  LL      ++ T+  ++    
Sbjct: 138 IDNPSSLLYNSIIRAYTRHGXXXXXXXXLEAYARMHFLGLLG-----DNFTLPFVLKSCA 192

Query: 323 PFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNA 382
               + +  C+H   L+ G+  +  V  +L  +Y +   +  ARKLFD+   + +ASWNA
Sbjct: 193 DLSRVCMGRCVHGQGLRVGLEGDFYVGASLIDMYVKCGVIGDARKLFDKMIVRDMASWNA 252

Query: 383 -------------------------------MIAGYTQNGLTEEAISLFQEM--QASKVA 409
                                          MI+GYTQNG  E+A+ LF EM    S++ 
Sbjct: 253 LIAGYMKEGEIGVAEDLFERMEHRNIVSWTAMISGYTQNGFAEQALGLFDEMLQDGSEMK 312

Query: 410 PNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEAREL 469
           PN VT+ S+L ACAQ  A+  G+ +H+         N  V TAL  MYAKC ++VEAR  
Sbjct: 313 PNWVTIVSVLPACAQSAALERGRRIHDFANGIGLHLNSSVQTALAGMYAKCYSLVEARCC 372

Query: 470 FDLMSH--KSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAG 527
           FD+++   K+ + WNTMI+ Y  HG G+EA+ +F  ML +G++P  VTF+ +L  CSH+G
Sbjct: 373 FDMIAQNGKNLIAWNTMITAYASHGCGVEAVSIFENMLRAGVQPDAVTFMGLLSGCSHSG 432

Query: 528 LVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGAL 587
           L+  G   F  M   H  +P  EHYAC+VD+LGRAG+L +A E I  + ++ GP+VWGAL
Sbjct: 433 LIDAGLNHFNDMGTIHSVEPRVEHYACVVDLLGRAGRLVEAKELISQMPMQAGPSVWGAL 492

Query: 588 LGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLA 647
           L AC  H++  +A +A+ +LF L+P+N G +VLLSN+Y+    + +   +R ++K + + 
Sbjct: 493 LAACRSHRNLEIAELAARRLFVLEPDNSGNYVLLSNLYAEAGMWEEVKKLRALLKYQGMK 552

Query: 648 KAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEE 707
           K+PGC+ IE+ G  H+F   D+ HPQ+  IY  LE L  K++ AG+  +T   LHD+ EE
Sbjct: 553 KSPGCSWIEINGKSHLFMGADKSHPQAKEIYKFLEALPEKIKMAGYIPDTSFVLHDISEE 612

Query: 708 EKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDA 767
           EKE  +  HSEKLAIAFGL+ T PG  +R+ KNLR+C DCH ATKFISK+  R I+VRD 
Sbjct: 613 EKEYNLTTHSEKLAIAFGLLNTRPGVVLRVTKNLRICGDCHAATKFISKIYEREIIVRDL 672

Query: 768 NRFHHFKGGVCSCGDYW 784
           NRFH FK G CSCGDYW
Sbjct: 673 NRFHCFKDGSCSCGDYW 689



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 123/448 (27%), Positives = 200/448 (44%), Gaps = 46/448 (10%)

Query: 126 IGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLM 185
           +G   H   ++ G   + F+ A +V +Y     + SA  VFD++    ++L+NS+I    
Sbjct: 95  LGQQAHAQIVLHGLQPNAFLAAKMVAMYASSGDLDSAVVVFDRIDNPSSLLYNSIIRAYT 154

Query: 186 KNCCFQDSIWVFGDMVRNG--GTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHD 243
           ++              R    G   D+ ++  VL + A++  + +G  +   GL++G   
Sbjct: 155 RHGXXXXXXXXLEAYARMHFLGLLGDNFTLPFVLKSCADLSRVCMGRCVHGQGLRVGLEG 214

Query: 244 HVYVLTGLVSFYSKC-------------------------------GEVERAELLFRDIV 272
             YV   L+  Y KC                               GE+  AE LF  + 
Sbjct: 215 DFYVGASLIDMYVKCGVIGDARKLFDKMIVRDMASWNALIAGYMKEGEIGVAEDLFERME 274

Query: 273 RPDLISCNAMISGYTCNGKTESSLRLFRQLL--ASAERVNSSTIVGLIPVFYPFGHLHLT 330
             +++S  AMISGYT NG  E +L LF ++L   S  + N  TIV ++P       L   
Sbjct: 275 HRNIVSWTAMISGYTQNGFAEQALGLFDEMLQDGSEMKPNWVTIVSVLPACAQSAALERG 334

Query: 331 NCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSE--KSLASWNAMIAGYT 388
             IH F    G+  NSSV TAL+ +Y++   +  AR  FD  ++  K+L +WN MI  Y 
Sbjct: 335 RRIHDFANGIGLHLNSSVQTALAGMYAKCYSLVEARCCFDMIAQNGKNLIAWNTMITAYA 394

Query: 389 QNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLG-KWVHELVKSRNFESNI 447
            +G   EA+S+F+ M  + V P+ VT   +LS C+  G I  G    +++    + E  +
Sbjct: 395 SHGCGVEAVSIFENMLRAGVQPDAVTFMGLLSGCSHSGLIDAGLNHFNDMGTIHSVEPRV 454

Query: 448 YVSTALIDMYAKCGNIVEARELFDLMSHKS-EVTWNTMISGYGLHGHGLEALQLFSEMLH 506
                ++D+  + G +VEA+EL   M  ++    W  +++    H   LE  +L +  L 
Sbjct: 455 EHYACVVDLLGRAGRLVEAKELISQMPMQAGPSVWGALLAACRSH-RNLEIAELAARRLF 513

Query: 507 SGIRPS---GVTFLSVLYACSHAGLVRE 531
             + P        LS LYA   AG+  E
Sbjct: 514 V-LEPDNSGNYVLLSNLYA--EAGMWEE 538



 Score =  126 bits (316), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 121/494 (24%), Positives = 204/494 (41%), Gaps = 86/494 (17%)

Query: 27  QTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNN- 85
           Q HAQI++HG Q +     K+    +       A  +F  I  P   L+N IIR ++ + 
Sbjct: 98  QAHAQIVLHGLQPNAFLAAKMVAMYASSGDLDSAVVVFDRIDNPSSLLYNSIIRAYTRHG 157

Query: 86  EMPKSSICFYTHLRKN-TALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLF 144
                      + R +   L  DNFT  FVL + +      +G  +HG  +  G   D +
Sbjct: 158 XXXXXXXXLEAYARMHFLGLLGDNFTLPFVLKSCADLSRVCMGRCVHGQGLRVGLEGDFY 217

Query: 145 VGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNS------------------------- 179
           VGA+L+D+Y K   +  ARK+FDKM  +D   WN+                         
Sbjct: 218 VGASLIDMYVKCGVIGDARKLFDKMIVRDMASWNALIAGYMKEGEIGVAEDLFERMEHRN 277

Query: 180 ------MISGLMKNCCFQDSIWVFGDMVRNGG----TWLDSTSVAAVLPAVAEVQELRLG 229
                 MISG  +N   + ++ +F +M+++G      W+   ++ +VLPA A+   L  G
Sbjct: 278 IVSWTAMISGYTQNGFAEQALGLFDEMLQDGSEMKPNWV---TIVSVLPACAQSAALERG 334

Query: 230 MEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVR--PDLISCNAMISGYT 287
             I      +G H +  V T L   Y+KC  +  A   F  I +   +LI+ N MI+ Y 
Sbjct: 335 RRIHDFANGIGLHLNSSVQTALAGMYAKCYSLVEARCCFDMIAQNGKNLIAWNTMITAYA 394

Query: 288 CNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSS 347
            +G    ++ +F  +L +  + ++ T +GL           L+ C HS  + +G+     
Sbjct: 395 SHGCGVEAVSIFENMLRAGVQPDAVTFMGL-----------LSGCSHSGLIDAGL----- 438

Query: 348 VLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASK 407
                    +  N+M         S E  +  +  ++    + G   EA  L  +M    
Sbjct: 439 ---------NHFNDMGTI-----HSVEPRVEHYACVVDLLGRAGRLVEAKELISQM---P 481

Query: 408 VAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNF-----ESNIYVSTALIDMYAKCGN 462
           +   P    ++L+AC     + +     EL   R F      S  YV   L ++YA+ G 
Sbjct: 482 MQAGPSVWGALLAACRSHRNLEIA----ELAARRLFVLEPDNSGNYV--LLSNLYAEAGM 535

Query: 463 IVEARELFDLMSHK 476
             E ++L  L+ ++
Sbjct: 536 WEEVKKLRALLKYQ 549



 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 48/207 (23%), Positives = 87/207 (42%), Gaps = 17/207 (8%)

Query: 410 PNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEAREL 469
           P+P + + I     +   I LG+  H  +     + N +++  ++ MYA  G++  A  +
Sbjct: 75  PHPSSYAPIFQFLTRHNFIKLGQQAHAQIVLHGLQPNAFLAAKMVAMYASSGDLDSAVVV 134

Query: 470 FDLMSHKSEVTWNTMISGYGLHG---HGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHA 526
           FD + + S + +N++I  Y  HG        L+ ++ M   G+     T   VL +C+  
Sbjct: 135 FDRIDNPSSLLYNSIIRAYTRHGXXXXXXXXLEAYARMHFLGLLGDNFTLPFVLKSCADL 194

Query: 527 GLVREGDEIFQSMIHDHGFKPLAEHY----ACMVDILGRAGQLEKALEFIKGLAVEPGPA 582
             V  G       +H  G +   E      A ++D+  + G +  A +    + V    A
Sbjct: 195 SRVCMG-----RCVHGQGLRVGLEGDFYVGASLIDMYVKCGVIGDARKLFDKMIVR-DMA 248

Query: 583 VWGALLGACMIHKDTNLARVASEKLFE 609
            W AL+   M   +  +A    E LFE
Sbjct: 249 SWNALIAGYMKEGEIGVA----EDLFE 271


>gi|326490792|dbj|BAJ90063.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 754

 Score =  444 bits (1142), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 238/685 (34%), Positives = 371/685 (54%), Gaps = 47/685 (6%)

Query: 142 DLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGL-----------MKNCCF 190
           +LF   AL+        +    ++F  MP++D V +N++I+G                  
Sbjct: 75  NLFTRNALLSALAHARLLPDMDRLFASMPQRDAVSYNALIAGFSGAGAPARAAGAYRALL 134

Query: 191 QDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTG 250
           ++   V G  VR         +++ ++ A + + +  LG ++ C  ++LGF  + +  + 
Sbjct: 135 REEAVVDGARVRP-----SRITMSGMVMAASALGDRALGRQVHCQIMRLGFGAYAFTWSP 189

Query: 251 LVSFYSK-------------------------------CGEVERAELLFRDIVRPDLISC 279
           LV  Y+K                               C  VE A  +F  +V  D I+ 
Sbjct: 190 LVDMYAKMGLIGDAKRVFDEMVVKNVVMYNTMITGLLRCKMVEEARGVFEAMVDRDSITW 249

Query: 280 NAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLK 339
             M++G T NG    +L +FR++ A    ++  T   ++              IH++ ++
Sbjct: 250 TTMVTGLTQNGLQSEALDVFRRMRAEGVGIDQYTFGSILTACGALAASEEGKQIHAYTIR 309

Query: 340 SGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISL 399
           +    N  V +AL  +YS+   +  A  +F   + K++ SW AMI GY QNG  EEA+ +
Sbjct: 310 TLYDGNIFVGSALVDMYSKCRSIRLAEAVFRRMTCKNIISWTAMIVGYGQNGCGEEAVRV 369

Query: 400 FQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAK 459
           F EMQ   + PN  T+ S++S+CA L ++  G   H +         I VS+AL+ +Y K
Sbjct: 370 FSEMQTDGIKPNDFTLGSVISSCANLASLEEGAQFHCMALVSGLRPYITVSSALVTLYGK 429

Query: 460 CGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSV 519
           CG+I +A  LFD M    +V++  ++SGY   G   E + LF +ML  G++P+GVTF+ V
Sbjct: 430 CGSIEDAHRLFDEMPFHDQVSYTALVSGYAQFGKAKETIDLFEKMLLKGVKPNGVTFIGV 489

Query: 520 LYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEP 579
           L ACS +GLV +G   F SM  DHG   L +HY CM+D+  R+G+L++A EFI+ +   P
Sbjct: 490 LSACSRSGLVEKGCSYFHSMQQDHGIVLLDDHYTCMIDLYSRSGRLKEAEEFIRQMPRCP 549

Query: 580 GPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQ 639
               W  LL AC +  D  + + A+E L + DP+N   +VLL ++++++ ++ + A +R+
Sbjct: 550 DAIGWATLLSACRLRGDMEIGKWAAENLLKTDPQNPASYVLLCSMHASKGEWSEVALLRR 609

Query: 640 VVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVT 699
            ++ R++ K PGC+ I+     H+F++ DQ HP S  IY  L+ LN KM E G++ +  +
Sbjct: 610 GMRDRQVKKEPGCSWIKYKNRVHIFSADDQSHPFSGTIYEKLQWLNSKMAEEGYKPDVSS 669

Query: 700 ALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTG 759
            LHDV + EK  M+  HSEKLAIAFGLI       IR++KNLRVC+DCH ATKFISK+TG
Sbjct: 670 VLHDVADAEKVHMLSNHSEKLAIAFGLIFVPEEMPIRVVKNLRVCVDCHNATKFISKITG 729

Query: 760 RVIVVRDANRFHHFKGGVCSCGDYW 784
           R I+VRDA RFH F  G+CSCGD+W
Sbjct: 730 RDILVRDAVRFHKFSNGICSCGDFW 754



 Score =  196 bits (497), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 136/468 (29%), Positives = 223/468 (47%), Gaps = 38/468 (8%)

Query: 63  LFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALT------PDNFTYSFVLS 116
           LF S+P+ D   +N +I GFS    P  +   Y  L +  A+       P   T S ++ 
Sbjct: 98  LFASMPQRDAVSYNALIAGFSGAGAPARAAGAYRALLREEAVVDGARVRPSRITMSGMVM 157

Query: 117 AASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVL 176
           AASA  DR++G  +H   +  G+G+  F  + LVD+Y K   +  A++VFD+M  K+ V+
Sbjct: 158 AASALGDRALGRQVHCQIMRLGFGAYAFTWSPLVDMYAKMGLIGDAKRVFDEMVVKNVVM 217

Query: 177 WNSMISGLMKNCCFQDSIWVFGDMV-RNGGTW---------------------------- 207
           +N+MI+GL++    +++  VF  MV R+  TW                            
Sbjct: 218 YNTMITGLLRCKMVEEARGVFEAMVDRDSITWTTMVTGLTQNGLQSEALDVFRRMRAEGV 277

Query: 208 -LDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAEL 266
            +D  +  ++L A   +     G +I    ++  +  +++V + LV  YSKC  +  AE 
Sbjct: 278 GIDQYTFGSILTACGALAASEEGKQIHAYTIRTLYDGNIFVGSALVDMYSKCRSIRLAEA 337

Query: 267 LFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGH 326
           +FR +   ++IS  AMI GY  NG  E ++R+F ++     + N  T+  +I        
Sbjct: 338 VFRRMTCKNIISWTAMIVGYGQNGCGEEAVRVFSEMQTDGIKPNDFTLGSVISSCANLAS 397

Query: 327 LHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAG 386
           L      H   L SG+    +V +AL T+Y +   +E A +LFDE       S+ A+++G
Sbjct: 398 LEEGAQFHCMALVSGLRPYITVSSALVTLYGKCGSIEDAHRLFDEMPFHDQVSYTALVSG 457

Query: 387 YTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLG-KWVHELVKSRNFES 445
           Y Q G  +E I LF++M    V PN VT   +LSAC++ G +  G  + H + +      
Sbjct: 458 YAQFGKAKETIDLFEKMLLKGVKPNGVTFIGVLSACSRSGLVEKGCSYFHSMQQDHGIVL 517

Query: 446 NIYVSTALIDMYAKCGNIVEARELFDLMSH-KSEVTWNTMISGYGLHG 492
                T +ID+Y++ G + EA E    M      + W T++S   L G
Sbjct: 518 LDDHYTCMIDLYSRSGRLKEAEEFIRQMPRCPDAIGWATLLSACRLRG 565



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 108/407 (26%), Positives = 193/407 (47%), Gaps = 38/407 (9%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           AR +F ++   D   +  ++ G + N +   ++  +  +R    +  D +T+  +L+A  
Sbjct: 234 ARGVFEAMVDRDSITWTTMVTGLTQNGLQSEALDVFRRMRAE-GVGIDQYTFGSILTACG 292

Query: 120 ACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNS 179
           A      G  +H + I + Y  ++FVG+ALVD+Y K   ++ A  VF +M  K+ + W +
Sbjct: 293 ALAASEEGKQIHAYTIRTLYDGNIFVGSALVDMYSKCRSIRLAEAVFRRMTCKNIISWTA 352

Query: 180 MISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKL 239
           MI G  +N C ++++ VF +M  +G    D T + +V+ + A +  L  G +  C+ L  
Sbjct: 353 MIVGYGQNGCGEEAVRVFSEMQTDGIKPNDFT-LGSVISSCANLASLEEGAQFHCMALVS 411

Query: 240 GFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLF 299
           G   ++ V + LV+ Y KCG +E A  LF ++   D +S  A++SGY   GK + ++ LF
Sbjct: 412 GLRPYITVSSALVTLYGKCGSIEDAHRLFDEMPFHDQVSYTALVSGYAQFGKAKETIDLF 471

Query: 300 RQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRL 359
            ++L    + N  T +G++                S C +SG+V            Y   
Sbjct: 472 EKMLLKGVKPNGVTFIGVL----------------SACSRSGLVEK-------GCSYFHS 508

Query: 360 NEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSIL 419
            + +    L D+        +  MI  Y+++G  +EA    ++M      P+ +  +++L
Sbjct: 509 MQQDHGIVLLDD-------HYTCMIDLYSRSGRLKEAEEFIRQMPR---CPDAIGWATLL 558

Query: 420 SACAQLGAISLGKWVHE-LVKSRNFESNIYVSTALIDMYAKCGNIVE 465
           SAC   G + +GKW  E L+K+       YV   L  M+A  G   E
Sbjct: 559 SACRLRGDMEIGKWAAENLLKTDPQNPASYV--LLCSMHASKGEWSE 603



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 68/274 (24%), Positives = 125/274 (45%), Gaps = 14/274 (5%)

Query: 27  QTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNE 86
           Q HA  I   +  ++   + L    S  ++   A A+F  +   ++  +  +I G+  N 
Sbjct: 302 QIHAYTIRTLYDGNIFVGSALVDMYSKCRSIRLAEAVFRRMTCKNIISWTAMIVGYGQNG 361

Query: 87  MPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVG 146
             + ++  ++ ++ +  + P++FT   V+S+ +       G   H  A+VSG    + V 
Sbjct: 362 CGEEAVRVFSEMQTD-GIKPNDFTLGSVISSCANLASLEEGAQFHCMALVSGLRPYITVS 420

Query: 147 AALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGT 206
           +ALV LY K   ++ A ++FD+MP  D V + +++SG  +    +++I +F  M+   G 
Sbjct: 421 SALVTLYGKCGSIEDAHRLFDEMPFHDQVSYTALVSGYAQFGKAKETIDLFEKMLLK-GV 479

Query: 207 WLDSTSVAAVLPAVAEVQELRLGM-EIQCLGLKLGFHDHVYVL-----TGLVSFYSKCGE 260
             +  +   VL A +     R G+ E  C        DH  VL     T ++  YS+ G 
Sbjct: 480 KPNGVTFIGVLSACS-----RSGLVEKGCSYFHSMQQDHGIVLLDDHYTCMIDLYSRSGR 534

Query: 261 VERAELLFRDIVR-PDLISCNAMISGYTCNGKTE 293
           ++ AE   R + R PD I    ++S     G  E
Sbjct: 535 LKEAEEFIRQMPRCPDAIGWATLLSACRLRGDME 568


>gi|145333528|ref|NP_001078414.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|223635630|sp|A8MQA3.2|PP330_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g21065
 gi|332658994|gb|AEE84394.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 595

 Score =  444 bits (1142), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 219/524 (41%), Positives = 332/524 (63%), Gaps = 3/524 (0%)

Query: 264 AELLFRDIVRP-DLISCNAMISGYTCNGKTESSLRLFRQLLASA-ERVNSSTIVGLIPVF 321
           A  +F  I +P ++   N +I GY   G + S+  L+R++  S     ++ T   LI   
Sbjct: 72  AHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAV 131

Query: 322 YPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWN 381
                + L   IHS  ++SG  S   V  +L  +Y+   ++ +A K+FD+  EK L +WN
Sbjct: 132 TTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWN 191

Query: 382 AMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSR 441
           ++I G+ +NG  EEA++L+ EM +  + P+  T+ S+LSACA++GA++LGK VH  +   
Sbjct: 192 SVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKV 251

Query: 442 NFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLF 501
               N++ S  L+D+YA+CG + EA+ LFD M  K+ V+W ++I G  ++G G EA++LF
Sbjct: 252 GLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELF 311

Query: 502 SEMLHS-GIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILG 560
             M  + G+ P  +TF+ +LYACSH G+V+EG E F+ M  ++  +P  EH+ CMVD+L 
Sbjct: 312 KYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLA 371

Query: 561 RAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVL 620
           RAGQ++KA E+IK + ++P   +W  LLGAC +H D++LA  A  ++ +L+P + G +VL
Sbjct: 372 RAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVL 431

Query: 621 LSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAM 680
           LSN+Y++E+ +     +R+ + +  + K PG +L+EVG   H F  GD+ HPQS AIYA 
Sbjct: 432 LSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAK 491

Query: 681 LEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKN 740
           L+++ G++R  G+  +      DVEEEEKE  +  HSEK+AIAF LI+T   + I ++KN
Sbjct: 492 LKEMTGRLRSEGYVPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKN 551

Query: 741 LRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           LRVC DCH A K +SKV  R IVVRD +RFHHFK G CSC DYW
Sbjct: 552 LRVCADCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 595



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 122/448 (27%), Positives = 216/448 (48%), Gaps = 43/448 (9%)

Query: 18  GAKTQSQLTQTHAQIIIHGFQ-NDLSTVTKLAHRLSDFKAT---CYARALFFSIPKP-DL 72
           G  + ++L Q HA  I HG   +D      L   L    +     YA  +F  I KP ++
Sbjct: 26  GVSSITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKIEKPINV 85

Query: 73  FLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHG 132
           F++N +IRG++      S+   Y  +R +  + PD  TY F++ A +   D  +G  +H 
Sbjct: 86  FIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHS 145

Query: 133 HAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQD 192
             I SG+GS ++V  +L+ LY     V SA KVFDKMPEKD V WNS+I+G  +N   ++
Sbjct: 146 VVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEE 205

Query: 193 SIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLV 252
           ++ ++ +M  + G   D  ++ ++L A A++  L LG  +    +K+G   +++    L+
Sbjct: 206 ALALYTEM-NSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLL 264

Query: 253 SFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSS 312
             Y++CG VE A+ LF ++V  + +S  ++I G   NG  + ++ LF+ + ++       
Sbjct: 265 DLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTE------ 318

Query: 313 TIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDES 372
              GL+P    F  + L  C H   +K G                     E  R++ +E 
Sbjct: 319 ---GLLPCEITFVGI-LYACSHCGMVKEG--------------------FEYFRRMREEY 354

Query: 373 S-EKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLG 431
             E  +  +  M+    + G  ++A   ++ +++  + PN V   ++L AC   G   L 
Sbjct: 355 KIEPRIEHFGCMVDLLARAGQVKKA---YEYIKSMPMQPNVVIWRTLLGACTVHGDSDLA 411

Query: 432 KWVH-ELVKSRNFESNIYVSTALIDMYA 458
           ++   ++++     S  YV   L +MYA
Sbjct: 412 EFARIQILQLEPNHSGDYV--LLSNMYA 437



 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 114/403 (28%), Positives = 198/403 (49%), Gaps = 24/403 (5%)

Query: 162 ARKVFDKMPEKDTV-LWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAV 220
           A KVF K+ +   V +WN++I G  +      +  ++ +M  +G    D+ +   ++ AV
Sbjct: 72  AHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAV 131

Query: 221 AEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCN 280
             + ++RLG  I  + ++ GF   +YV   L+  Y+ CG+V  A  +F  +   DL++ N
Sbjct: 132 TTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWN 191

Query: 281 AMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKS 340
           ++I+G+  NGK E +L L+ ++ +   + +  TIV L+      G L L   +H + +K 
Sbjct: 192 SVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKV 251

Query: 341 GIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLF 400
           G+  N      L  +Y+R   +E A+ LFDE  +K+  SW ++I G   NG  +EAI LF
Sbjct: 252 GLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELF 311

Query: 401 QEMQASK-VAPNPVTVSSILSACAQLGAISLG-KWVHELVKSRNFESNIYVSTALIDMYA 458
           + M++++ + P  +T   IL AC+  G +  G ++   + +    E  I     ++D+ A
Sbjct: 312 KYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLA 371

Query: 459 KCGNIVEARELFDLMSHKSEVT-WNTMISGYGLHGHG-------LEALQLFSEMLHSGIR 510
           + G + +A E    M  +  V  W T++    +HG         ++ LQL  E  HSG  
Sbjct: 372 RAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQL--EPNHSG-- 427

Query: 511 PSGVTFLSVLYACSHAGLVREGD--EIFQSMIHDHGFKPLAEH 551
                 LS +YA       R  D  +I + M+ D G K +  H
Sbjct: 428 --DYVLLSNMYASEQ----RWSDVQKIRKQMLRD-GVKKVPGH 463


>gi|225447043|ref|XP_002269269.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Vitis vinifera]
          Length = 640

 Score =  444 bits (1142), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 233/603 (38%), Positives = 346/603 (57%), Gaps = 34/603 (5%)

Query: 216 VLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSF--YSKCGEVERAELLFRDIVR 273
           +L  ++  + L+   +I    +  G     +V + ++SF   S  G +  A  LF  I +
Sbjct: 38  ILRHLSSCKTLKDLTQIHAQTITTGIFSDNFVASRILSFAALSPHGSIPYARFLFYRIRK 97

Query: 274 PDLISCNAMISGYTCNGKTESSLRLFRQLLASAERV-NSSTIVGLIPVFYPFGHLHLTNC 332
           PD+   N +I  Y  +     ++  + ++  S+    +  T   L+        L L   
Sbjct: 98  PDIFIANTLIRAYAFSPNPIDAVVFYSEMTESSVVFPDVHTFPLLLKACSEIPSLRLGEA 157

Query: 333 IHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAA--------------------------- 365
           IHS   K G  S  SV   L  +Y+    +E+A                           
Sbjct: 158 IHSHVFKLGWSSEVSVSNFLVQMYASCGLIESAGLVFDRTPECDGASWNIMIGGYLKCGV 217

Query: 366 ----RKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSA 421
               R++F+   ++ + SW+ MI GY Q    +E + LFQ+M   K+ PN   + + LSA
Sbjct: 218 FKSARRMFEAMPDRDVVSWSVMINGYVQESRFKEGLGLFQDMMGEKIEPNESVLVNALSA 277

Query: 422 CAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTW 481
           CA LGA+  G+W+   ++ +N    + + TALIDMY+KCG++  A E+F  M  K+ + W
Sbjct: 278 CAHLGAMEQGQWIERYMERKNVRLTVRLGTALIDMYSKCGSVERALEVFHKMKEKNVLAW 337

Query: 482 NTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIH 541
           + MI+G  ++G G +AL LFS+M   G++P+ VTF+ +L ACSH+ LV EG   F SM  
Sbjct: 338 SAMINGLAINGQGKDALNLFSQMEMQGVKPNEVTFIGILNACSHSKLVDEGCSFFHSMTS 397

Query: 542 DHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLAR 601
            +G KP A H+ CMVD+ GRAG L++A   IK +  +P  A+WGALL AC IH DT L  
Sbjct: 398 IYGLKPNAHHHCCMVDLYGRAGMLDQAQTVIKSMPFKPNSAIWGALLNACRIHGDTELGE 457

Query: 602 VASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTP 661
              ++L ELDP + G +VLLSNIY+A   + + A +R+++++R+++K PGC+ I++G T 
Sbjct: 458 QVGKRLLELDPNHGGRYVLLSNIYAACGRWDRVAELRRMMRERQVSKTPGCSFIDLGDTI 517

Query: 662 HVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLA 721
           H F +GD  HPQ   IYA L +++ +++ AG++ +T   L D++EEEKE  +  HSEKLA
Sbjct: 518 HEFVAGDSSHPQLEMIYAKLGEMSQELKAAGYKPDTGQVLLDMDEEEKETALCHHSEKLA 577

Query: 722 IAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCG 781
           IAFGLI T+PGT IRI KNLRVC DCH+ATK ISK+  R I+VRD  RFHHF+ G CSC 
Sbjct: 578 IAFGLIKTDPGTTIRITKNLRVCADCHSATKLISKIYNREIIVRDRCRFHHFRDGSCSCM 637

Query: 782 DYW 784
           D+W
Sbjct: 638 DFW 640



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 134/515 (26%), Positives = 229/515 (44%), Gaps = 82/515 (15%)

Query: 3   MKTPQ--SRNLFLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAH--RLSDFKATC 58
           + TPQ   +   L  L   KT   LTQ HAQ I  G  +D    +++     LS   +  
Sbjct: 27  IPTPQLLCKYPILRHLSSCKTLKDLTQIHAQTITTGIFSDNFVASRILSFAALSPHGSIP 86

Query: 59  YARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAA 118
           YAR LF+ I KPD+F+ N +IR ++ +  P  ++ FY+ + +++ + PD  T+  +L A 
Sbjct: 87  YARFLFYRIRKPDIFIANTLIRAYAFSPNPIDAVVFYSEMTESSVVFPDVHTFPLLLKAC 146

Query: 119 SACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDL-------------------------- 152
           S      +G  +H H    G+ S++ V   LV +                          
Sbjct: 147 SEIPSLRLGEAIHSHVFKLGWSSEVSVSNFLVQMYASCGLIESAGLVFDRTPECDGASWN 206

Query: 153 -----YFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMV-----R 202
                Y K    KSAR++F+ MP++D V W+ MI+G ++   F++ + +F DM+      
Sbjct: 207 IMIGGYLKCGVFKSARRMFEAMPDRDVVSWSVMINGYVQESRFKEGLGLFQDMMGEKIEP 266

Query: 203 NGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVE 262
           N    +++ S  A L A+ + Q +   ME + + L       V + T L+  YSKCG VE
Sbjct: 267 NESVLVNALSACAHLGAMEQGQWIERYMERKNVRLT------VRLGTALIDMYSKCGSVE 320

Query: 263 RAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFY 322
           RA  +F  +   ++++ +AMI+G   NG+ + +L LF Q+     + N  T +G+     
Sbjct: 321 RALEVFHKMKEKNVLAWSAMINGLAINGQGKDALNLFSQMEMQGVKPNEVTFIGI----- 375

Query: 323 PFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNA 382
                 L  C HS  +  G     S   +++++Y                 + +      
Sbjct: 376 ------LNACSHSKLVDEG----CSFFHSMTSIYGL---------------KPNAHHHCC 410

Query: 383 MIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWV-HELVKSR 441
           M+  Y + G+ ++A ++ + M      PN     ++L+AC   G   LG+ V   L++  
Sbjct: 411 MVDLYGRAGMLDQAQTVIKSM---PFKPNSAIWGALLNACRIHGDTELGEQVGKRLLELD 467

Query: 442 NFESNIYVSTALIDMYAKCGNIVEARELFDLMSHK 476
                 YV   L ++YA CG      EL  +M  +
Sbjct: 468 PNHGGRYV--LLSNIYAACGRWDRVAELRRMMRER 500


>gi|218526158|sp|Q9M1V3.2|PP296_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g63370
          Length = 960

 Score =  444 bits (1142), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 261/789 (33%), Positives = 427/789 (54%), Gaps = 15/789 (1%)

Query: 5   TPQSRNLFLSLLKGAKTQSQL---TQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYAR 61
            P   + F +LLK       +   ++ H+ ++  G+ +    V  L    +       AR
Sbjct: 178 VPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAAR 237

Query: 62  ALFFSI-PKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASA 120
            LF     K D  L+N I+  +S +     ++  +  +   T   P+++T    L+A   
Sbjct: 238 RLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHM-TGPAPNSYTIVSALTACDG 296

Query: 121 CCDRSIGVLLHGHAIVSG-YGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNS 179
                +G  +H   + S  + S+L+V  AL+ +Y +   +  A ++  +M   D V WNS
Sbjct: 297 FSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNS 356

Query: 180 MISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKL 239
           +I G ++N  +++++  F DM+  G    D  S+ +++ A   +  L  GME+    +K 
Sbjct: 357 LIKGYVQNLMYKEALEFFSDMIAAGHK-SDEVSMTSIIAASGRLSNLLAGMELHAYVIKH 415

Query: 240 GFHDHVYVLTGLVSFYSKCG---EVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSL 296
           G+  ++ V   L+  YSKC     + RA L   D    DLIS   +I+GY  N     +L
Sbjct: 416 GWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHD---KDLISWTTVIAGYAQNDCHVEAL 472

Query: 297 RLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVY 356
            LFR +      ++   +  ++        + +   IH   L+ G++ ++ +   L  VY
Sbjct: 473 ELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLL-DTVIQNELVDVY 531

Query: 357 SRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVS 416
            +   M  A ++F+    K + SW +MI+    NG   EA+ LF+ M  + ++ + V + 
Sbjct: 532 GKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALL 591

Query: 417 SILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHK 476
            ILSA A L A++ G+ +H  +  + F     ++ A++DMYA CG++  A+ +FD +  K
Sbjct: 592 CILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERK 651

Query: 477 SEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIF 536
             + + +MI+ YG+HG G  A++LF +M H  + P  ++FL++LYACSHAGL+ EG    
Sbjct: 652 GLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFL 711

Query: 537 QSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKD 596
           + M H++  +P  EHY C+VD+LGRA  + +A EF+K +  EP   VW ALL AC  H +
Sbjct: 712 KIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSE 771

Query: 597 TNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIE 656
             +  +A+++L EL+P+N G  VL+SN+++ +  +     VR  +K   + K PGC+ IE
Sbjct: 772 KEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIE 831

Query: 657 VGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKM-REAGFQTETVTALHDVEEEEKELMMKV 715
           + G  H FT+ D+ HP+S  IY  L ++  K+ RE G+  +T   LH+V+E EK  M+  
Sbjct: 832 MDGKVHKFTARDKSHPESKEIYEKLSEVTRKLEREVGYVADTKFVLHNVDEGEKVQMLHG 891

Query: 716 HSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKG 775
           HSE++AIA+GL+ T     +RI KNLRVC DCHT  K +SK+  R IV+RDANRFHHF+ 
Sbjct: 892 HSERIAIAYGLLRTPDRACLRITKNLRVCRDCHTFCKLVSKLFRRDIVMRDANRFHHFES 951

Query: 776 GVCSCGDYW 784
           G+CSCGD W
Sbjct: 952 GLCSCGDSW 960



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 132/450 (29%), Positives = 229/450 (50%), Gaps = 30/450 (6%)

Query: 144 FVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRN 203
           F+   LV +Y K   +  A KVFD+MP++    WN+MI   + N     ++ ++ +M R 
Sbjct: 117 FLAGKLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNM-RV 175

Query: 204 GGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVER 263
            G  L  +S  A+L A A+++++R G E+  L +KLG+H   +++  LVS Y+K  ++  
Sbjct: 176 EGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSA 235

Query: 264 AELLFRDIV-RPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFY 322
           A  LF     + D +  N+++S Y+ +GK+  +L LFR++  +    NS TIV  +    
Sbjct: 236 ARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACD 295

Query: 323 PFGHLHLTNCIHSFCLKSGIVSNS-SVLTALSTVYSRLNEMEAARKLFDESSEKSLASWN 381
            F +  L   IH+  LKS   S+   V  AL  +Y+R  +M  A ++  + +   + +WN
Sbjct: 296 GFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWN 355

Query: 382 AMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSR 441
           ++I GY QN + +EA+  F +M A+    + V+++SI++A  +L  +  G  +H  V   
Sbjct: 356 SLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKH 415

Query: 442 NFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLF 501
            ++SN+ V   LIDMY+KC         F  M  K  ++W T+I+GY  +   +EAL+LF
Sbjct: 416 GWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELF 475

Query: 502 SEMLHSGIRPSGVTFLSVLYACS-----------HAGLVREGDEIFQSMIHDHGFKPLAE 550
            ++    +    +   S+L A S           H  ++R+G  +  ++I +        
Sbjct: 476 RDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKG--LLDTVIQNE------- 526

Query: 551 HYACMVDILGRA---GQLEKALEFIKGLAV 577
               +VD+ G+    G   +  E IKG  V
Sbjct: 527 ----LVDVYGKCRNMGYATRVFESIKGKDV 552



 Score = 73.2 bits (178), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 51/203 (25%), Positives = 95/203 (46%), Gaps = 7/203 (3%)

Query: 390 NGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSR--NFESNI 447
           +G+  EA   FQ +  S+        + +L  C +  A+S G+ +H  +     +FE + 
Sbjct: 61  DGVLTEA---FQRLDVSENNSPVEAFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELD- 116

Query: 448 YVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHS 507
           +++  L+ MY KCG++ +A ++FD M  ++   WNTMI  Y  +G    AL L+  M   
Sbjct: 117 FLAGKLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVE 176

Query: 508 GIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEK 567
           G+     +F ++L AC+    +R G E+  S++   G+         +V +  +   L  
Sbjct: 177 GVPLGLSSFPALLKACAKLRDIRSGSEL-HSLLVKLGYHSTGFIVNALVSMYAKNDDLSA 235

Query: 568 ALEFIKGLAVEPGPAVWGALLGA 590
           A     G   +    +W ++L +
Sbjct: 236 ARRLFDGFQEKGDAVLWNSILSS 258


>gi|297844796|ref|XP_002890279.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297336121|gb|EFH66538.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 953

 Score =  444 bits (1141), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 253/758 (33%), Positives = 387/758 (51%), Gaps = 14/758 (1%)

Query: 28  THAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNEM 87
            H  ++  G   DL     L            A  LF  +P+ +L  +N +IR FS+N  
Sbjct: 209 VHGLVVKTGLVEDLFVGNALVSFYGTHGFVSDALKLFDIMPERNLVSWNSMIRVFSDNG- 267

Query: 88  PKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGA 147
                        + A  PD  T   VL   +   +  +G  +HG A+      +L V  
Sbjct: 268 ------------DDGAFMPDVATVVTVLPVCAREREIGVGKGVHGWAVKLSLDKELVVNN 315

Query: 148 ALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNG-GT 206
           AL+D+Y K+  +  ++ +F     K+ V WN+M+ G         +  +   M+      
Sbjct: 316 ALMDMYSKWGCIIDSQMIFKLNNNKNVVSWNTMVGGFSAEGDIHGTFDLLRQMLAGSEDV 375

Query: 207 WLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAEL 266
             D  ++   +P   +   L    E+ C  LK  F     +    V+ Y+KCG +  A+ 
Sbjct: 376 KADEVTILNAVPVCFDESVLPSLKELHCYSLKQEFVYDELLANAFVASYAKCGSLSYAQR 435

Query: 267 LFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGH 326
           +F  I    L S NA+I GY  +     SL    Q+  S    ++ T+  L+        
Sbjct: 436 VFHGIRSKTLNSWNALIGGYAQSSDPRLSLDAHLQMKNSGLLPDNFTVCSLLSACSKLKS 495

Query: 327 LHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAG 386
           L L   +H F +++ +  +  V  ++ ++Y    E+   + LFD   + SL SWN +I G
Sbjct: 496 LRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQVLFDAMEDNSLVSWNTVITG 555

Query: 387 YTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESN 446
           + QNG  E A+ LF++M    + P  +++ ++  AC+ L ++ LG+  H        E N
Sbjct: 556 HLQNGFPERALGLFRQMVLYGIQPCGISMMTVFGACSLLPSLRLGREAHAYALKHLLEDN 615

Query: 447 IYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLH 506
            +++ ++IDMYAK G I ++ ++F+ +  KS  +WN MI GYG+HG   EA++LF EM  
Sbjct: 616 AFIACSIIDMYAKNGAITQSSKVFNGLKEKSAASWNAMIMGYGMHGRAKEAIKLFEEMQR 675

Query: 507 SGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLE 566
           +G  P  +TFL VL AC+H+GL+ EG      M    G KP  +HYAC++D+LGRAGQL+
Sbjct: 676 TGRNPDDLTFLGVLTACNHSGLLHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLD 735

Query: 567 KALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYS 626
            AL     ++ EP   +W +LL  C IH++  +    + KLF L+PE    +VLLSN+Y+
Sbjct: 736 NALRVAAEMSEEPDVGIWNSLLSWCRIHQNLEMGEKVAAKLFVLEPEKPENYVLLSNLYA 795

Query: 627 AERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNG 686
               +     VRQ +K+  L K  GC+ IE+ G    F  G++       I ++   L  
Sbjct: 796 GLGKWDDVRQVRQRMKEMSLRKDAGCSWIELNGKVFSFVVGERFLDGFEEIKSLWSILEM 855

Query: 687 KMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLD 746
           K+ + G++ +T +  HD+ EEEK   ++ HSEKLAI +GLI T  GT +R+ KNLR+C+D
Sbjct: 856 KIWKMGYRPDTSSVQHDLSEEEKIEQLRGHSEKLAITYGLIKTSEGTTLRVYKNLRICVD 915

Query: 747 CHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           CH A K ISKV  R IVVRD  RFHHF  G CSCGDYW
Sbjct: 916 CHNAAKLISKVMEREIVVRDNKRFHHFNKGFCSCGDYW 953



 Score =  273 bits (699), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 166/541 (30%), Positives = 276/541 (51%), Gaps = 25/541 (4%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           +R+ F ++   +LF +N +I  +S NE+    +  +  +   T L PDNFT+  V+ A +
Sbjct: 139 SRSAFDALRSKNLFQWNAVISSYSRNELYHEVLEMFIKMISKTHLLPDNFTFPCVIKACA 198

Query: 120 ACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNS 179
              D  IG+ +HG  + +G   DLFVG ALV  Y    +V  A K+FD MPE++ V WNS
Sbjct: 199 GISDVGIGLAVHGLVVKTGLVEDLFVGNALVSFYGTHGFVSDALKLFDIMPERNLVSWNS 258

Query: 180 MISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKL 239
           MI              VF D   +G    D  +V  VLP  A  +E+ +G  +    +KL
Sbjct: 259 MIR-------------VFSDNGDDGAFMPDVATVVTVLPVCAREREIGVGKGVHGWAVKL 305

Query: 240 GFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLF 299
                + V   L+  YSK G +  ++++F+     +++S N M+ G++  G    +  L 
Sbjct: 306 SLDKELVVNNALMDMYSKWGCIIDSQMIFKLNNNKNVVSWNTMVGGFSAEGDIHGTFDLL 365

Query: 300 RQLLASAERVNSS--TIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYS 357
           RQ+LA +E V +   TI+  +PV +    L     +H + LK   V +  +  A    Y+
Sbjct: 366 RQMLAGSEDVKADEVTILNAVPVCFDESVLPSLKELHCYSLKQEFVYDELLANAFVASYA 425

Query: 358 RLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSS 417
           +   +  A+++F     K+L SWNA+I GY Q+     ++    +M+ S + P+  TV S
Sbjct: 426 KCGSLSYAQRVFHGIRSKTLNSWNALIGGYAQSSDPRLSLDAHLQMKNSGLLPDNFTVCS 485

Query: 418 ILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKS 477
           +LSAC++L ++ LGK VH  +     E +++V  +++ +Y  CG +   + LFD M   S
Sbjct: 486 LLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQVLFDAMEDNS 545

Query: 478 EVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQ 537
            V+WNT+I+G+  +G    AL LF +M+  GI+P G++ ++V  ACS    +R G E   
Sbjct: 546 LVSWNTVITGHLQNGFPERALGLFRQMVLYGIQPCGISMMTVFGACSLLPSLRLGRE--- 602

Query: 538 SMIHDHGFKPLAEHYA----CMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMI 593
              H +  K L E  A     ++D+  + G + ++ +   GL  E   A W A++    +
Sbjct: 603 --AHAYALKHLLEDNAFIACSIIDMYAKNGAITQSSKVFNGLK-EKSAASWNAMIMGYGM 659

Query: 594 H 594
           H
Sbjct: 660 H 660



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 105/418 (25%), Positives = 192/418 (45%), Gaps = 24/418 (5%)

Query: 133 HAIVSG---YGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCC 189
           H +VSG     SD  +   ++ +Y        +R  FD +  K+   WN++IS   +N  
Sbjct: 107 HHLVSGSTRLRSDDVLCTRIITMYAMCGSPDDSRSAFDALRSKNLFQWNAVISSYSRNEL 166

Query: 190 FQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLT 249
           + + + +F  M+       D+ +   V+ A A + ++ +G+ +  L +K G  + ++V  
Sbjct: 167 YHEVLEMFIKMISKTHLLPDNFTFPCVIKACAGISDVGIGLAVHGLVVKTGLVEDLFVGN 226

Query: 250 GLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERV 309
            LVSFY   G V  A  LF  +   +L+S N+MI  ++ NG               A   
Sbjct: 227 ALVSFYGTHGFVSDALKLFDIMPERNLVSWNSMIRVFSDNGDD------------GAFMP 274

Query: 310 NSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLF 369
           + +T+V ++PV      + +   +H + +K  +     V  AL  +YS+   +  ++ +F
Sbjct: 275 DVATVVTVLPVCAREREIGVGKGVHGWAVKLSLDKELVVNNALMDMYSKWGCIIDSQMIF 334

Query: 370 DESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQA--SKVAPNPVTVSSILSACAQLGA 427
             ++ K++ SWN M+ G++  G       L ++M A    V  + VT+ + +  C     
Sbjct: 335 KLNNNKNVVSWNTMVGGFSAEGDIHGTFDLLRQMLAGSEDVKADEVTILNAVPVCFDESV 394

Query: 428 ISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISG 487
           +   K +H     + F  +  ++ A +  YAKCG++  A+ +F  +  K+  +WN +I G
Sbjct: 395 LPSLKELHCYSLKQEFVYDELLANAFVASYAKCGSLSYAQRVFHGIRSKTLNSWNALIGG 454

Query: 488 YGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGF 545
           Y        +L    +M +SG+ P   T  S+L ACS    +R G E+       HGF
Sbjct: 455 YAQSSDPRLSLDAHLQMKNSGLLPDNFTVCSLLSACSKLKSLRLGKEV-------HGF 505


>gi|224138230|ref|XP_002322762.1| predicted protein [Populus trichocarpa]
 gi|222867392|gb|EEF04523.1| predicted protein [Populus trichocarpa]
          Length = 617

 Score =  444 bits (1141), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 231/581 (39%), Positives = 341/581 (58%), Gaps = 51/581 (8%)

Query: 245 VYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLA 304
           V+  + L+S       ++ A  +F  I  P+L   N+ I G++ +   + S   + Q   
Sbjct: 47  VFAASCLISISINKNLLDYAAQVFYQIQNPNLFIYNSFIRGFSGSKDPDKSFHFYVQ--- 103

Query: 305 SAERVNSSTIVGLIP--VFYPF--------GHLHLTNCIHSFCLKSGIVSNSSVLTALST 354
                  S   GL+P  + YPF        G L +    H   ++ G  S+  V  +L T
Sbjct: 104 -------SKRNGLVPDNLTYPFLVKACTQKGSLDMGIQAHGQIIRHGFDSDVYVQNSLVT 156

Query: 355 VYSRLNEMEAA-------------------------------RKLFDESSEKSLASWNAM 383
           +YS L ++++A                               RKLFD+  EK+L +W+ M
Sbjct: 157 MYSTLGDIKSASYVFRRISCLDVVSWTSMVAGYIKSGDVTSARKLFDKMPEKNLVTWSVM 216

Query: 384 IAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNF 443
           I+GY +N   ++AI L+  +Q+  V  N   + S++++CA LGA+ LG+  H+ +     
Sbjct: 217 ISGYAKNSFFDKAIELYFLLQSEGVHANETVMVSVIASCAHLGALELGERAHDYILRNKM 276

Query: 444 ESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSE 503
             N+ + TAL+DMYA+CG+I +A  +FD +  +  ++W T+I+G+ +HG+  +AL+ FS 
Sbjct: 277 TVNLILGTALVDMYARCGSIDKAIWVFDQLPGRDALSWTTLIAGFAMHGYAEKALEYFSR 336

Query: 504 MLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAG 563
           M  +G+ P  +TF +VL ACSH GLV  G E+F+SM  D+  +P  EHY CMVD+LGRAG
Sbjct: 337 MEKAGLTPREITFTAVLSACSHGGLVERGLELFESMKRDYRIEPRLEHYGCMVDLLGRAG 396

Query: 564 QLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSN 623
           +L +A +F+  + ++P   +WGALLGAC IHK++ +A  A + L EL PE+ GY+VLLSN
Sbjct: 397 KLAEAEKFVNEMPMKPNAPIWGALLGACRIHKNSEIAERAGKTLIELKPEHSGYYVLLSN 456

Query: 624 IYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEK 683
           IY+    +     +RQ++K+R + K PG TL E+ G  H FT GD+ HP+   I  M E+
Sbjct: 457 IYARTNKWENVENIRQMMKERGVVKPPGYTLFEMDGKVHKFTIGDKTHPEIQQIERMWEE 516

Query: 684 LNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRV 743
           + GK+R AG+      AL D++EEEKE  +  HSEKLAIA+ ++ T+    IRI+KNLRV
Sbjct: 517 ILGKIRLAGYTGNNDDALFDIDEEEKESNIHRHSEKLAIAYAIMRTKGHDPIRIVKNLRV 576

Query: 744 CLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           C DCHTATK ISKV  R ++VRD NRFHHFKGG CSC DYW
Sbjct: 577 CEDCHTATKLISKVYERELIVRDRNRFHHFKGGACSCMDYW 617



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 126/466 (27%), Positives = 204/466 (43%), Gaps = 92/466 (19%)

Query: 1   MSMKTPQSRNLFLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSD-FKATC- 58
           + ++  + +N  LS L+   T S L   HA +I              AH + D F A+C 
Sbjct: 7   LVLRKLELKNPKLSFLESCTTLSHLKIIHAHLI-------------RAHTIFDVFAASCL 53

Query: 59  -----------YARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPD 107
                      YA  +F+ I  P+LF++N  IRGFS ++ P  S  FY   ++N  L PD
Sbjct: 54  ISISINKNLLDYAAQVFYQIQNPNLFIYNSFIRGFSGSKDPDKSFHFYVQSKRN-GLVPD 112

Query: 108 NFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLY------------FK 155
           N TY F++ A +      +G+  HG  I  G+ SD++V  +LV +Y            F+
Sbjct: 113 NLTYPFLVKACTQKGSLDMGIQAHGQIIRHGFDSDVYVQNSLVTMYSTLGDIKSASYVFR 172

Query: 156 -------FSW------------VKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWV 196
                   SW            V SARK+FDKMPEK+ V W+ MISG  KN  F  +I +
Sbjct: 173 RISCLDVVSWTSMVAGYIKSGDVTSARKLFDKMPEKNLVTWSVMISGYAKNSFFDKAIEL 232

Query: 197 FGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYS 256
           +  ++++ G   + T + +V+ + A +  L LG       L+     ++ + T LV  Y+
Sbjct: 233 YF-LLQSEGVHANETVMVSVIASCAHLGALELGERAHDYILRNKMTVNLILGTALVDMYA 291

Query: 257 KCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVG 316
           +CG +++A  +F  +   D +S   +I+G+  +G  E +L  F ++  +          G
Sbjct: 292 RCGSIDKAIWVFDQLPGRDALSWTTLIAGFAMHGYAEKALEYFSRMEKA----------G 341

Query: 317 LIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKS 376
           L P    F  + L+ C H   ++ G                 L   E+ ++  D   E  
Sbjct: 342 LTPREITFTAV-LSACSHGGLVERG-----------------LELFESMKR--DYRIEPR 381

Query: 377 LASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSAC 422
           L  +  M+    + G   EA     EM    + PN     ++L AC
Sbjct: 382 LEHYGCMVDLLGRAGKLAEAEKFVNEM---PMKPNAPIWGALLGAC 424



 Score = 82.4 bits (202), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 63/295 (21%), Positives = 132/295 (44%), Gaps = 37/295 (12%)

Query: 333 IHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGL 392
           IH+  +++  + +    + L ++    N ++ A ++F +    +L  +N+ I G++ +  
Sbjct: 34  IHAHLIRAHTIFDVFAASCLISISINKNLLDYAAQVFYQIQNPNLFIYNSFIRGFSGSKD 93

Query: 393 TEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTA 452
            +++   + + + + + P+ +T   ++ AC Q G++ +G   H  +    F+S++YV  +
Sbjct: 94  PDKSFHFYVQSKRNGLVPDNLTYPFLVKACTQKGSLDMGIQAHGQIIRHGFDSDVYVQNS 153

Query: 453 LIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEM-------- 504
           L+ MY+  G+I  A  +F  +S    V+W +M++GY   G    A +LF +M        
Sbjct: 154 LVTMYSTLGDIKSASYVFRRISCLDVVSWTSMVAGYIKSGDVTSARKLFDKMPEKNLVTW 213

Query: 505 ----------------------LHS-GIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIH 541
                                 L S G+  +    +SV+ +C+H G +  G+     ++ 
Sbjct: 214 SVMISGYAKNSFFDKAIELYFLLQSEGVHANETVMVSVIASCAHLGALELGERAHDYILR 273

Query: 542 DHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAV--WGALLGACMIH 594
           +     L    A +VD+  R G ++KA+     L   PG     W  L+    +H
Sbjct: 274 NKMTVNLILGTA-LVDMYARCGSIDKAIWVFDQL---PGRDALSWTTLIAGFAMH 324


>gi|296090147|emb|CBI39966.3| unnamed protein product [Vitis vinifera]
          Length = 726

 Score =  444 bits (1141), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 240/693 (34%), Positives = 381/693 (54%), Gaps = 39/693 (5%)

Query: 130 LHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFD-KMPEKDTVLWNSMISGLMKNC 188
           LH   I  G    +   A L+  Y  F    S+  VF    P  +  LWNS+I  L  N 
Sbjct: 35  LHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFRLASPSNNVYLWNSIIRALTHNG 94

Query: 189 CFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVL 248
            F +++ ++ +  R      D+ +  +V+ A A + +  +   I    L +GF   +Y+ 
Sbjct: 95  LFSEALSLYSETQRIR-LQPDTYTFPSVINACAGLLDFEMAKSIHDRVLDMGFGSDLYIG 153

Query: 249 TGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLA-SAE 307
             L+  Y +  ++++A  +F ++   D++S N++ISGY  NG    +L ++ Q +    E
Sbjct: 154 NALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYQSIKLFME 213

Query: 308 RVNSS-----TIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEM 362
            VN       TI  ++      G L     +H + + SG   +++    L  +Y++   +
Sbjct: 214 MVNQFKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNL 273

Query: 363 EAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASK--------------- 407
            A++++F     K   SWN+MI  Y QNG   +++ +F+ M+A                 
Sbjct: 274 LASQEVFSGMKCKDSVSWNSMINVYIQNGKMGDSLKVFENMKARDIITWNTIIASCVHSE 333

Query: 408 ----------------VAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVST 451
                           V P+  T+ SIL  C+ L A   GK +H  +     ES++ V  
Sbjct: 334 DCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGN 393

Query: 452 ALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRP 511
            LI+MY+KCG++  + ++F LM  K  VTW  +IS  G++G G +A++ F EM  +GI P
Sbjct: 394 VLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVP 453

Query: 512 SGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEF 571
             V F+++++ACSH+GLV EG   F  M  D+  +P  EHYAC+VD+L R+  L+KA +F
Sbjct: 454 DHVAFVAIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSALLDKAEDF 513

Query: 572 IKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDY 631
           I  + ++P  ++WGALL AC +  DT +A   SE++ EL+P++ GY+VL+SNIY+A   +
Sbjct: 514 ILSMPLKPDSSIWGALLSACRMSGDTEIAERVSERIIELNPDDTGYYVLVSNIYAALGKW 573

Query: 632 LQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREA 691
            Q  ++R+ +K R L K PGC+ +E+    +VF +G +   Q   +  +L  L G M + 
Sbjct: 574 DQVRSIRKSIKARGLKKDPGCSWMEIQNKVYVFGTGTKFFEQFEEVNKLLGMLAGLMAKE 633

Query: 692 GFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTAT 751
           G+       LHD++E+EK  ++  HSE+LAIAFGL+ T+PGT ++++KNLRVC DCHT T
Sbjct: 634 GYIANLQFVLHDIDEDEKRDILCGHSERLAIAFGLLNTKPGTPLQVMKNLRVCEDCHTVT 693

Query: 752 KFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           K+ISK+  R ++VRDANRFH FK G CSCGDYW
Sbjct: 694 KYISKIVQRELLVRDANRFHVFKDGACSCGDYW 726



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 129/518 (24%), Positives = 244/518 (47%), Gaps = 44/518 (8%)

Query: 16  LKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALF-FSIPKPDLFL 74
           L  A T +QL + H+ II  G  + +    KL  + + F+    + ++F  + P  +++L
Sbjct: 23  LASAATTTQLHKLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFRLASPSNNVYL 82

Query: 75  FNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHA 134
           +N IIR  ++N +   ++  Y+  ++   L PD +T+  V++A +   D  +   +H   
Sbjct: 83  WNSIIRALTHNGLFSEALSLYSETQR-IRLQPDTYTFPSVINACAGLLDFEMAKSIHDRV 141

Query: 135 IVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQD-- 192
           +  G+GSDL++G AL+D+Y +F+ +  ARKVF++MP +D V WNS+ISG   N  + +  
Sbjct: 142 LDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEAL 201

Query: 193 -----SIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYV 247
                SI +F +MV       D  ++ ++L A   + +L  G  +    +  G+      
Sbjct: 202 EIYYQSIKLFMEMVNQFKP--DLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTA 259

Query: 248 LTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLAS-- 305
              L++ Y+KCG +  ++ +F  +   D +S N+MI+ Y  NGK   SL++F  + A   
Sbjct: 260 SNILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGKMGDSLKVFENMKARDI 319

Query: 306 ------------AERVN-----------------SSTIVGLIPVFYPFGHLHLTNCIHSF 336
                       +E  N                  +T++ ++PV            IH  
Sbjct: 320 ITWNTIIASCVHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGC 379

Query: 337 CLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEA 396
             K G+ S+  V   L  +YS+   +  + ++F     K + +W A+I+     G  ++A
Sbjct: 380 IFKLGLESDVPVGNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKA 439

Query: 397 ISLFQEMQASKVAPNPVTVSSILSACAQLGAISLG-KWVHELVKSRNFESNIYVSTALID 455
           +  F EM+A+ + P+ V   +I+ AC+  G +  G  + H + K    E  I     ++D
Sbjct: 440 VRAFGEMEAAGIVPDHVAFVAIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYACVVD 499

Query: 456 MYAKCGNIVEARELFDLMSHKSEVT-WNTMISGYGLHG 492
           + ++   + +A +    M  K + + W  ++S   + G
Sbjct: 500 LLSRSALLDKAEDFILSMPLKPDSSIWGALLSACRMSG 537


>gi|115462637|ref|NP_001054918.1| Os05g0212100 [Oryza sativa Japonica Group]
 gi|48475165|gb|AAT44234.1| unknown protein, contains PPR repeat [Oryza sativa Japonica Group]
 gi|113578469|dbj|BAF16832.1| Os05g0212100 [Oryza sativa Japonica Group]
 gi|215695208|dbj|BAG90399.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222630605|gb|EEE62737.1| hypothetical protein OsJ_17540 [Oryza sativa Japonica Group]
          Length = 822

 Score =  443 bits (1140), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 235/650 (36%), Positives = 385/650 (59%), Gaps = 15/650 (2%)

Query: 139 YGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFG 198
           +G+D+ VG+AL+D+  +   + SARKVFD + EK  V+W  +IS  ++  C ++++ +F 
Sbjct: 184 WGTDIAVGSALIDMLARNGDLASARKVFDGLIEKTVVVWTLLISRYVQGECAEEAVEIFL 243

Query: 199 DMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKC 258
           D + +G    D  ++++++ A  E+  +RLG+++  L L++GF     V  GLV  Y+K 
Sbjct: 244 DFLEDGFE-PDRYTMSSMISACTELGSVRLGLQLHSLALRMGFASDACVSCGLVDMYAKS 302

Query: 259 G---EVERAELLFRDIVRPDLISCNAMISGYTCNGKTESS-LRLFRQLLASAERVNSSTI 314
                ++ A  +F  + + D+IS  A+ISGY  +G  E+  + LF ++L  + + N  T 
Sbjct: 303 NIEQAMDYANKVFERMRKNDVISWTALISGYVQSGVQENKVMVLFGEMLNESIKPNHITY 362

Query: 315 VGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSE 374
             ++              +H+  +KS   +  +V  AL ++Y+    ME AR++F++  E
Sbjct: 363 SSILKACANISDHDSGRQVHAHVIKSNQAAAHTVGNALVSMYAESGCMEEARRVFNQLYE 422

Query: 375 KSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWV 434
           +S      MI+  T+         L   +    +  +  T +S++SA A +G ++ G+ +
Sbjct: 423 RS------MISCITEG----RDAPLDHRIGRMDMGISSSTFASLISAAASVGMLTKGQQL 472

Query: 435 HELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHG 494
           H +     F S+ +VS +L+ MY++CG + +A   F+ +  ++ ++W +MISG   HG+ 
Sbjct: 473 HAMTLKAGFGSDRFVSNSLVSMYSRCGYLEDACRSFNELKDRNVISWTSMISGLAKHGYA 532

Query: 495 LEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYAC 554
             AL LF +M+ +G++P+ VT+++VL ACSH GLVREG E F+SM  DHG  P  EHYAC
Sbjct: 533 ERALSLFHDMILTGVKPNDVTYIAVLSACSHVGLVREGKEYFRSMQRDHGLIPRMEHYAC 592

Query: 555 MVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPEN 614
           MVD+L R+G +++ALEFI  + ++    VW  LLGAC  H +  +  +A++ + EL+P +
Sbjct: 593 MVDLLARSGLVKEALEFINEMPLKADALVWKTLLGACRSHDNIEVGEIAAKNVIELEPRD 652

Query: 615 VGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQS 674
              +VLLSN+Y+    + + A +R  ++   L K  G + +EV  T H F +GD  HP++
Sbjct: 653 PAPYVLLSNLYADAGLWDEVARIRSAMRDNNLNKETGLSWMEVENTTHEFRAGDTSHPRA 712

Query: 675 TAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTE 734
             IY  L+ L G+++  G+  +T   LHD+ +E KE  +  HSEK+A+AFGLI T     
Sbjct: 713 QDIYGKLDTLVGEIKGMGYVPDTSIVLHDMSDELKEQYLLQHSEKIAVAFGLITTSAPKP 772

Query: 735 IRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           IRI KNLRVC DCH+A K++SK T R I++RD+NRFH  K G CSCG+YW
Sbjct: 773 IRIFKNLRVCADCHSAIKYMSKATRREIILRDSNRFHRMKDGECSCGEYW 822



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 121/441 (27%), Positives = 206/441 (46%), Gaps = 33/441 (7%)

Query: 142 DLFVGAALVDLYFKFSWVKSARKVFDKMPE-KDTVLWNSMISGLMKNCCFQDSIWVFGDM 200
           D  V  +L+ LY +   V SAR VFD M   +D V W +M S L +N   ++S+ + G+M
Sbjct: 83  DAVVANSLLTLYSRCGAVASARNVFDGMRGLRDIVSWTAMASCLARNGAERESLLLIGEM 142

Query: 201 VRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGL--------KLG-FHDHVYVLTGL 251
           + + G   ++ ++ AV  A           E+ CL          K+G +   + V + L
Sbjct: 143 LES-GLLPNAYTLCAVAHAC-------FPHELYCLVGGVVLGLVHKMGLWGTDIAVGSAL 194

Query: 252 VSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNS 311
           +   ++ G++  A  +F  ++   ++    +IS Y      E ++ +F   L      + 
Sbjct: 195 IDMLARNGDLASARKVFDGLIEKTVVVWTLLISRYVQGECAEEAVEIFLDFLEDGFEPDR 254

Query: 312 STIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLN---EMEAARKL 368
            T+  +I      G + L   +HS  L+ G  S++ V   L  +Y++ N    M+ A K+
Sbjct: 255 YTMSSMISACTELGSVRLGLQLHSLALRMGFASDACVSCGLVDMYAKSNIEQAMDYANKV 314

Query: 369 FDESSEKSLASWNAMIAGYTQNGLTEEAIS-LFQEMQASKVAPNPVTVSSILSACAQLGA 427
           F+   +  + SW A+I+GY Q+G+ E  +  LF EM    + PN +T SSIL ACA +  
Sbjct: 315 FERMRKNDVISWTALISGYVQSGVQENKVMVLFGEMLNESIKPNHITYSSILKACANISD 374

Query: 428 ISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISG 487
              G+ VH  V   N  +   V  AL+ MYA+ G + EAR +F+ +  +S ++  T    
Sbjct: 375 HDSGRQVHAHVIKSNQAAAHTVGNALVSMYAESGCMEEARRVFNQLYERSMISCITEGRD 434

Query: 488 YGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKP 547
             L  H +  + +       GI  S  TF S++ A +  G++ +G ++  +M    GF  
Sbjct: 435 APLD-HRIGRMDM-------GISSS--TFASLISAAASVGMLTKGQQL-HAMTLKAGFGS 483

Query: 548 LAEHYACMVDILGRAGQLEKA 568
                  +V +  R G LE A
Sbjct: 484 DRFVSNSLVSMYSRCGYLEDA 504



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 107/445 (24%), Positives = 190/445 (42%), Gaps = 57/445 (12%)

Query: 27  QTHAQIIIHGFQNDLSTVTKLAHRLSDF---KATCYARALFFSIPKPDLFLFNVIIRGFS 83
           Q H+  +  GF +D      L    +     +A  YA  +F  + K D+  +  +I G+ 
Sbjct: 275 QLHSLALRMGFASDACVSCGLVDMYAKSNIEQAMDYANKVFERMRKNDVISWTALISGYV 334

Query: 84  NNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDL 143
            + + ++ +        N ++ P++ TYS +L A +   D   G  +H H I S   +  
Sbjct: 335 QSGVQENKVMVLFGEMLNESIKPNHITYSSILKACANISDHDSGRQVHAHVIKSNQAAAH 394

Query: 144 FVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRN 203
            VG ALV +Y +   ++ AR+VF+++ E+      SMIS     C  +         +  
Sbjct: 395 TVGNALVSMYAESGCMEEARRVFNQLYER------SMIS-----CITEGRDAPLDHRIGR 443

Query: 204 GGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVER 263
               + S++ A+++ A A V  L  G ++  + LK GF    +V   LVS YS+CG +E 
Sbjct: 444 MDMGISSSTFASLISAAASVGMLTKGQQLHAMTLKAGFGSDRFVSNSLVSMYSRCGYLED 503

Query: 264 AELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYP 323
           A   F ++   ++IS  +MISG   +G  E +L LF  ++ +  + N  T + +      
Sbjct: 504 ACRSFNELKDRNVISWTSMISGLAKHGYAERALSLFHDMILTGVKPNDVTYIAV------ 557

Query: 324 FGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAM 383
                L+ C H   ++ G         ++   +  +  ME                +  M
Sbjct: 558 -----LSACSHVGLVREG----KEYFRSMQRDHGLIPRME---------------HYACM 593

Query: 384 IAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLG----KWVHELVK 439
           +    ++GL +EA+    EM    +  + +   ++L AC     I +G    K V EL +
Sbjct: 594 VDLLARSGLVKEALEFINEM---PLKADALVWKTLLGACRSHDNIEVGEIAAKNVIEL-E 649

Query: 440 SRN-----FESNIYVSTALIDMYAK 459
            R+       SN+Y    L D  A+
Sbjct: 650 PRDPAPYVLLSNLYADAGLWDEVAR 674



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 75/251 (29%), Positives = 131/251 (52%), Gaps = 6/251 (2%)

Query: 325 GHLHLTNCIHSFCLKSGIVSNSSVL-TALSTVYSRLNEMEAARKLFDE-SSEKSLASWNA 382
           G L L   +H   L+  ++   +V+  +L T+YSR   + +AR +FD     + + SW A
Sbjct: 62  GDLRLGRALHRRLLRGDLLDRDAVVANSLLTLYSRCGAVASARNVFDGMRGLRDIVSWTA 121

Query: 383 MIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSAC--AQLGAISLGKWVHELVKS 440
           M +   +NG   E++ L  EM  S + PN  T+ ++  AC   +L  +  G  +  + K 
Sbjct: 122 MASCLARNGAERESLLLIGEMLESGLLPNAYTLCAVAHACFPHELYCLVGGVVLGLVHKM 181

Query: 441 RNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQL 500
             + ++I V +ALIDM A+ G++  AR++FD +  K+ V W  +IS Y       EA+++
Sbjct: 182 GLWGTDIAVGSALIDMLARNGDLASARKVFDGLIEKTVVVWTLLISRYVQGECAEEAVEI 241

Query: 501 FSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILG 560
           F + L  G  P   T  S++ AC+  G VR G ++  S+    GF   A     +VD+  
Sbjct: 242 FLDFLEDGFEPDRYTMSSMISACTELGSVRLGLQL-HSLALRMGFASDACVSCGLVDMYA 300

Query: 561 RAGQLEKALEF 571
           ++  +E+A+++
Sbjct: 301 KS-NIEQAMDY 310



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 56/184 (30%), Positives = 95/184 (51%), Gaps = 6/184 (3%)

Query: 409 APNPVTVSSILSACAQLGAISLGKWVHE-LVKSRNFESNIYVSTALIDMYAKCGNIVEAR 467
           + +P  VS++L+A A+ G + LG+ +H  L++    + +  V+ +L+ +Y++CG +  AR
Sbjct: 45  SSHPSDVSALLAAAARAGDLRLGRALHRRLLRGDLLDRDAVVANSLLTLYSRCGAVASAR 104

Query: 468 ELFDLMSH-KSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHA 526
            +FD M   +  V+W  M S    +G   E+L L  EML SG+ P+  T  +V +AC   
Sbjct: 105 NVFDGMRGLRDIVSWTAMASCLARNGAERESLLLIGEMLESGLLPNAYTLCAVAHACFPH 164

Query: 527 GLVREGDEIFQSMIHDHGF--KPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVW 584
            L      +   ++H  G     +A   A ++D+L R G L  A +   GL +E    VW
Sbjct: 165 ELYCLVGGVVLGLVHKMGLWGTDIAVGSA-LIDMLARNGDLASARKVFDGL-IEKTVVVW 222

Query: 585 GALL 588
             L+
Sbjct: 223 TLLI 226


>gi|224129792|ref|XP_002320672.1| predicted protein [Populus trichocarpa]
 gi|222861445|gb|EEE98987.1| predicted protein [Populus trichocarpa]
          Length = 720

 Score =  443 bits (1140), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 244/661 (36%), Positives = 382/661 (57%), Gaps = 13/661 (1%)

Query: 133 HAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQD 192
           HA    +  ++F   AL+  Y K S +  A  +FD++P+ D V +N++I+          
Sbjct: 64  HAFNQTHEPNVFSFNALIAAYAKESLIHVAHHLFDQIPQPDLVSFNTLINAYADRGDTLS 123

Query: 193 SIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLV 252
           ++ +FG+M R  G  +D  + + V+ A      + L  ++  L    GF  +V V   L+
Sbjct: 124 ALSLFGEM-REMGLVMDGFTFSGVITACC--NHVGLIRQLHSLAFSSGFDSYVSVKNSLL 180

Query: 253 SFYSKCGEVERAELLFRDI---VRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERV 309
           ++YSK G +E AE++F  +   VR D +S N+MI  Y  + +   +L L+R ++     +
Sbjct: 181 TYYSKNGILEEAEMVFNGMGEEVR-DEVSWNSMIVAYGQHKRGLKALALYRDMVHRGFEI 239

Query: 310 NSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNE-MEAARKL 368
           +  T+  ++  F     L      H+  +K+G   N  V + L  +Y++    M  +RK+
Sbjct: 240 DMFTLASVLTTFSCVEDLSGGLQFHAKAIKTGFNKNRHVGSGLIDMYAKCGAGMSESRKV 299

Query: 369 FDESSEKSLASWNAMIAGYTQNG-LTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGA 427
           F+E     L  WN MI+GY+QN  L+ EA+  F++MQ +   P+  +    +SAC+ L +
Sbjct: 300 FEEICGSDLVVWNTMISGYSQNKELSVEALECFRQMQRAGYWPDDCSFVCAISACSNLSS 359

Query: 428 ISLGKWVHELVKSRNFESN-IYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMIS 486
            S GK  H L       SN I V+ AL+ MY+KCGN+ +AR+LF  M   + VT N++I+
Sbjct: 360 PSQGKQFHALAMKSEIPSNQISVNNALVTMYSKCGNLQDARKLFQRMPQHNTVTLNSIIA 419

Query: 487 GYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFK 546
           GY  HG G E+L LF +ML + I P+ +T +S+L AC+H G V EG + F  M    G +
Sbjct: 420 GYAQHGIGTESLNLFEQMLAASIAPTSITLVSILSACAHTGRVEEGKKYFNMMKDIFGIE 479

Query: 547 PLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEK 606
           P AEHY+CM+D+LGRAG+L +A   I  +   PG A W ALLGAC  + +  LA  A+ +
Sbjct: 480 PEAEHYSCMIDLLGRAGKLSEAERLIDTMPFSPGSAAWAALLGACRKYGNMELAEKAANQ 539

Query: 607 LFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTS 666
             +L+P N   +++L+++YSA R + +AA +R++++ R + K PGC+ IE+    HVF +
Sbjct: 540 FLQLEPTNAVPYIMLASMYSAARKWEEAARIRKLMRDRGIRKKPGCSWIELNKRVHVFVA 599

Query: 667 GDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTAL---HDVEEEEKELMMKVHSEKLAIA 723
            D  HP+   I+  L+++  KM+ AG+  +   A     +  E+EKE+M+  HSEKLA+A
Sbjct: 600 EDNSHPRIKEIHMYLDEMFVKMKRAGYVPDVRWAFVKDDETGEQEKEIMLAHHSEKLAVA 659

Query: 724 FGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDY 783
           FGL+ T+ G  + ++KNLR+C DCH A KF+S +  R I VRDA RFH F+ G CSCGDY
Sbjct: 660 FGLLFTKHGEPLLVVKNLRICGDCHNAIKFMSAIARRKITVRDAYRFHCFEDGRCSCGDY 719

Query: 784 W 784
           W
Sbjct: 720 W 720



 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 136/422 (32%), Positives = 226/422 (53%), Gaps = 14/422 (3%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           A  LF  IP+PDL  FN +I  +++     S++  +  +R+   L  D FT+S V+   +
Sbjct: 93  AHHLFDQIPQPDLVSFNTLINAYADRGDTLSALSLFGEMRE-MGLVMDGFTFSGVI---T 148

Query: 120 ACCDRSIGVL--LHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPE--KDTV 175
           ACC+  +G++  LH  A  SG+ S + V  +L+  Y K   ++ A  VF+ M E  +D V
Sbjct: 149 ACCNH-VGLIRQLHSLAFSSGFDSYVSVKNSLLTYYSKNGILEEAEMVFNGMGEEVRDEV 207

Query: 176 LWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCL 235
            WNSMI    ++     ++ ++ DMV  G   +D  ++A+VL   + V++L  G++    
Sbjct: 208 SWNSMIVAYGQHKRGLKALALYRDMVHRGFE-IDMFTLASVLTTFSCVEDLSGGLQFHAK 266

Query: 236 GLKLGFHDHVYVLTGLVSFYSKCGE-VERAELLFRDIVRPDLISCNAMISGYTCNGK-TE 293
            +K GF+ + +V +GL+  Y+KCG  +  +  +F +I   DL+  N MISGY+ N + + 
Sbjct: 267 AIKTGFNKNRHVGSGLIDMYAKCGAGMSESRKVFEEICGSDLVVWNTMISGYSQNKELSV 326

Query: 294 SSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNS-SVLTAL 352
            +L  FRQ+  +    +  + V  I               H+  +KS I SN  SV  AL
Sbjct: 327 EALECFRQMQRAGYWPDDCSFVCAISACSNLSSPSQGKQFHALAMKSEIPSNQISVNNAL 386

Query: 353 STVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNP 412
            T+YS+   ++ ARKLF    + +  + N++IAGY Q+G+  E+++LF++M A+ +AP  
Sbjct: 387 VTMYSKCGNLQDARKLFQRMPQHNTVTLNSIIAGYAQHGIGTESLNLFEQMLAASIAPTS 446

Query: 413 VTVSSILSACAQLGAISLGKWVHELVKS-RNFESNIYVSTALIDMYAKCGNIVEARELFD 471
           +T+ SILSACA  G +  GK    ++K     E      + +ID+  + G + EA  L D
Sbjct: 447 ITLVSILSACAHTGRVEEGKKYFNMMKDIFGIEPEAEHYSCMIDLLGRAGKLSEAERLID 506

Query: 472 LM 473
            M
Sbjct: 507 TM 508



 Score =  122 bits (306), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 96/357 (26%), Positives = 159/357 (44%), Gaps = 33/357 (9%)

Query: 212 SVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDI 271
           S   +L +    ++L  G  +  + LK       Y+    +  YSKC  +  A   F   
Sbjct: 10  SFRQILKSCIANKDLLTGKSLHTIYLKSLIPSSTYLSNHFILLYSKCNLLTTAHHAFNQT 69

Query: 272 VRPDLISCNAMISGYTCNGKTESSLRLFRQLL------------ASAERVNSSTIVGLIP 319
             P++ S NA+I+ Y        +  LF Q+             A A+R ++ + + L  
Sbjct: 70  HEPNVFSFNALIAAYAKESLIHVAHHLFDQIPQPDLVSFNTLINAYADRGDTLSALSLFG 129

Query: 320 VFYPFG-----------------HLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEM 362
                G                 H+ L   +HS    SG  S  SV  +L T YS+   +
Sbjct: 130 EMREMGLVMDGFTFSGVITACCNHVGLIRQLHSLAFSSGFDSYVSVKNSLLTYYSKNGIL 189

Query: 363 EAARKLFDESSE--KSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILS 420
           E A  +F+   E  +   SWN+MI  Y Q+    +A++L+++M       +  T++S+L+
Sbjct: 190 EEAEMVFNGMGEEVRDEVSWNSMIVAYGQHKRGLKALALYRDMVHRGFEIDMFTLASVLT 249

Query: 421 ACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCG-NIVEARELFDLMSHKSEV 479
             + +  +S G   H       F  N +V + LIDMYAKCG  + E+R++F+ +     V
Sbjct: 250 TFSCVEDLSGGLQFHAKAIKTGFNKNRHVGSGLIDMYAKCGAGMSESRKVFEEICGSDLV 309

Query: 480 TWNTMISGYGLHGH-GLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEI 535
            WNTMISGY  +    +EAL+ F +M  +G  P   +F+  + ACS+     +G + 
Sbjct: 310 VWNTMISGYSQNKELSVEALECFRQMQRAGYWPDDCSFVCAISACSNLSSPSQGKQF 366



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 89/324 (27%), Positives = 160/324 (49%), Gaps = 12/324 (3%)

Query: 107 DNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKF-SWVKSARKV 165
           D FT + VL+  S   D S G+  H  AI +G+  +  VG+ L+D+Y K  + +  +RKV
Sbjct: 240 DMFTLASVLTTFSCVEDLSGGLQFHAKAIKTGFNKNRHVGSGLIDMYAKCGAGMSESRKV 299

Query: 166 FDKMPEKDTVLWNSMISGLMKNCCFQ-DSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQ 224
           F+++   D V+WN+MISG  +N     +++  F  M R  G W D  S    + A + + 
Sbjct: 300 FEEICGSDLVVWNTMISGYSQNKELSVEALECFRQMQR-AGYWPDDCSFVCAISACSNLS 358

Query: 225 ELRLGMEIQCLGLKLGF-HDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMI 283
               G +   L +K     + + V   LV+ YSKCG ++ A  LF+ + + + ++ N++I
Sbjct: 359 SPSQGKQFHALAMKSEIPSNQISVNNALVTMYSKCGNLQDARKLFQRMPQHNTVTLNSII 418

Query: 284 SGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKS--G 341
           +GY  +G    SL LF Q+LA++    S T+V ++      G +       +  +K   G
Sbjct: 419 AGYAQHGIGTESLNLFEQMLAASIAPTSITLVSILSACAHTGRVEEGKKYFNM-MKDIFG 477

Query: 342 IVSNSSVLTALSTVYSRLNEMEAARKLFDESS-EKSLASWNAMIAGYTQNG---LTEEAI 397
           I   +   + +  +  R  ++  A +L D        A+W A++    + G   L E+A 
Sbjct: 478 IEPEAEHYSCMIDLLGRAGKLSEAERLIDTMPFSPGSAAWAALLGACRKYGNMELAEKAA 537

Query: 398 SLFQEMQASKVAPNPVTVSSILSA 421
           + F +++ +   P  + ++S+ SA
Sbjct: 538 NQFLQLEPTNAVPY-IMLASMYSA 560



 Score = 95.9 bits (237), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 74/259 (28%), Positives = 119/259 (45%), Gaps = 50/259 (19%)

Query: 295 SLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALST 354
           +L+ FRQ+L S    N   + G                +H+  LKS I S++ +      
Sbjct: 7   TLQSFRQILKSC-IANKDLLTG--------------KSLHTIYLKSLIPSSTYLSNHFIL 51

Query: 355 VYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGL---------------------- 392
           +YS+ N +  A   F+++ E ++ S+NA+IA Y +  L                      
Sbjct: 52  LYSKCNLLTTAHHAFNQTHEPNVFSFNALIAAYAKESLIHVAHHLFDQIPQPDLVSFNTL 111

Query: 393 ---------TEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNF 443
                    T  A+SLF EM+   +  +  T S +++AC     + L + +H L  S  F
Sbjct: 112 INAYADRGDTLSALSLFGEMREMGLVMDGFTFSGVITACCN--HVGLIRQLHSLAFSSGF 169

Query: 444 ESNIYVSTALIDMYAKCGNIVEARELFDLMSH--KSEVTWNTMISGYGLHGHGLEALQLF 501
           +S + V  +L+  Y+K G + EA  +F+ M    + EV+WN+MI  YG H  GL+AL L+
Sbjct: 170 DSYVSVKNSLLTYYSKNGILEEAEMVFNGMGEEVRDEVSWNSMIVAYGQHKRGLKALALY 229

Query: 502 SEMLHSGIRPSGVTFLSVL 520
            +M+H G      T  SVL
Sbjct: 230 RDMVHRGFEIDMFTLASVL 248


>gi|15240583|ref|NP_196827.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75181132|sp|Q9LYV3.1|PP377_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At5g13230, mitochondrial; Flags: Precursor
 gi|7529278|emb|CAB86630.1| putative protein [Arabidopsis thaliana]
 gi|332004486|gb|AED91869.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 822

 Score =  443 bits (1140), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 265/735 (36%), Positives = 403/735 (54%), Gaps = 25/735 (3%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHL-RKNTALTPDNFTYSFV---- 114
           A  LF  +P+ +   F  + +G++     +  I  Y+ L R+   L P  FT SF+    
Sbjct: 103 ALNLFDEMPERNNVSFVTLAQGYA----CQDPIGLYSRLHREGHELNPHVFT-SFLKLFV 157

Query: 115 -LSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKD 173
            L  A  C        LH   +  GY S+ FVGAAL++ Y     V SAR VF+ +  KD
Sbjct: 158 SLDKAEIC------PWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKD 211

Query: 174 TVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQ 233
            V+W  ++S  ++N  F+DS+ +   M R  G   ++ +    L A   +        + 
Sbjct: 212 IVVWAGIVSCYVENGYFEDSLKLLSCM-RMAGFMPNNYTFDTALKASIGLGAFDFAKGVH 270

Query: 234 CLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTE 293
              LK  +     V  GL+  Y++ G++  A  +F ++ + D++  + MI+ +  NG   
Sbjct: 271 GQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCN 330

Query: 294 SSLRLF---RQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLT 350
            ++ LF   R+          S+I+    +    G   L   +H   +K G   +  V  
Sbjct: 331 EAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSG---LGEQLHGLVVKVGFDLDIYVSN 387

Query: 351 ALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAP 410
           AL  VY++  +M+ A KLF E S K+  SWN +I GY   G   +A S+F+E   ++V+ 
Sbjct: 388 ALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSV 447

Query: 411 NPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELF 470
             VT SS L ACA L ++ LG  VH L    N    + VS +LIDMYAKCG+I  A+ +F
Sbjct: 448 TEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVF 507

Query: 471 DLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVR 530
           + M      +WN +ISGY  HG G +AL++   M     +P+G+TFL VL  CS+AGL+ 
Sbjct: 508 NEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLID 567

Query: 531 EGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGA 590
           +G E F+SMI DHG +P  EHY CMV +LGR+GQL+KA++ I+G+  EP   +W A+L A
Sbjct: 568 QGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSA 627

Query: 591 CMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAP 650
            M   +   AR ++E++ +++P++   +VL+SN+Y+  + +   A++R+ +K+  + K P
Sbjct: 628 SMNQNNEEFARRSAEEILKINPKDEATYVLVSNMYAGAKQWANVASIRKSMKEMGVKKEP 687

Query: 651 GCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKE 710
           G + IE  G  H F+ G   HP    I  MLE LN K   AG+  +    L D+++EEK+
Sbjct: 688 GLSWIEHQGDVHYFSVGLSDHPDMKLINGMLEWLNMKATRAGYVPDRNAVLLDMDDEEKD 747

Query: 711 LMMKVHSEKLAIAFGLIATEPG-TEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANR 769
             + VHSE+LA+A+GL+        I I+KNLR+C DCH+A K IS +  R +V+RD NR
Sbjct: 748 KRLWVHSERLALAYGLVRMPSSRNRILIMKNLRICSDCHSAMKVISSIVQRDLVIRDMNR 807

Query: 770 FHHFKGGVCSCGDYW 784
           FHHF  GVCSCGD+W
Sbjct: 808 FHHFHAGVCSCGDHW 822



 Score =  203 bits (517), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 141/465 (30%), Positives = 229/465 (49%), Gaps = 7/465 (1%)

Query: 130 LHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCC 189
           +H   +  G   DLF    L++ Y K  + K A  +FD+MPE++ V + ++  G     C
Sbjct: 71  IHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQGY---AC 127

Query: 190 FQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLT 249
            QD I ++  + R G   L+     + L     + +  +   +    +KLG+  + +V  
Sbjct: 128 -QDPIGLYSRLHREGHE-LNPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGA 185

Query: 250 GLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERV 309
            L++ YS CG V+ A  +F  I+  D++    ++S Y  NG  E SL+L   +  +    
Sbjct: 186 ALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMP 245

Query: 310 NSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLF 369
           N+ T    +      G       +H   LK+  V +  V   L  +Y++L +M  A K+F
Sbjct: 246 NNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVF 305

Query: 370 DESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAIS 429
           +E  +  +  W+ MIA + QNG   EA+ LF  M+ + V PN  T+SSIL+ CA      
Sbjct: 306 NEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSG 365

Query: 430 LGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYG 489
           LG+ +H LV    F+ +IYVS ALID+YAKC  +  A +LF  +S K+EV+WNT+I GY 
Sbjct: 366 LGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYE 425

Query: 490 LHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLA 549
             G G +A  +F E L + +  + VTF S L AC+    +  G ++    I  +  K +A
Sbjct: 426 NLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVA 485

Query: 550 EHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIH 594
              + ++D+  + G ++ A      +      A W AL+     H
Sbjct: 486 VSNS-LIDMYAKCGDIKFAQSVFNEMET-IDVASWNALISGYSTH 528



 Score =  112 bits (280), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 86/369 (23%), Positives = 164/369 (44%), Gaps = 5/369 (1%)

Query: 208 LDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELL 267
           LDS +  A+L    +  +      I C  LK G    ++    L++ Y K G  + A  L
Sbjct: 47  LDSHAYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNL 106

Query: 268 FRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHL 327
           F ++   + +S   +  GY C    +  + L+ +L      +N       + +F      
Sbjct: 107 FDEMPERNNVSFVTLAQGYAC----QDPIGLYSRLHREGHELNPHVFTSFLKLFVSLDKA 162

Query: 328 HLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGY 387
            +   +HS  +K G  SN+ V  AL   YS    +++AR +F+    K +  W  +++ Y
Sbjct: 163 EICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCY 222

Query: 388 TQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNI 447
            +NG  E+++ L   M+ +   PN  T  + L A   LGA    K VH  +    +  + 
Sbjct: 223 VENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDP 282

Query: 448 YVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHS 507
            V   L+ +Y + G++ +A ++F+ M     V W+ MI+ +  +G   EA+ LF  M  +
Sbjct: 283 RVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREA 342

Query: 508 GIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEK 567
            + P+  T  S+L  C+       G+++   ++   GF         ++D+  +  +++ 
Sbjct: 343 FVVPNEFTLSSILNGCAIGKCSGLGEQL-HGLVVKVGFDLDIYVSNALIDVYAKCEKMDT 401

Query: 568 ALEFIKGLA 576
           A++    L+
Sbjct: 402 AVKLFAELS 410



 Score = 66.2 bits (160), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 64/280 (22%), Positives = 121/280 (43%), Gaps = 6/280 (2%)

Query: 27  QTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSN-N 85
           Q H  ++  GF  D+     L    +  +    A  LF  +   +   +N +I G+ N  
Sbjct: 369 QLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLG 428

Query: 86  EMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFV 145
           E  K+   F   LR   ++T    T+S  L A ++     +GV +HG AI +     + V
Sbjct: 429 EGGKAFSMFREALRNQVSVT--EVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAV 486

Query: 146 GAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGG 205
             +L+D+Y K   +K A+ VF++M   D   WN++ISG   +   + ++ +  D++++  
Sbjct: 487 SNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRIL-DIMKDRD 545

Query: 206 TWLDSTSVAAVLPAVAEVQELRLGME-IQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERA 264
              +  +   VL   +    +  G E  + +    G    +   T +V    + G++++A
Sbjct: 546 CKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKA 605

Query: 265 ELLFRDI-VRPDLISCNAMISGYTCNGKTESSLRLFRQLL 303
             L   I   P ++   AM+S        E + R   ++L
Sbjct: 606 MKLIEGIPYEPSVMIWRAMLSASMNQNNEEFARRSAEEIL 645


>gi|413944960|gb|AFW77609.1| hypothetical protein ZEAMMB73_798524 [Zea mays]
          Length = 665

 Score =  443 bits (1140), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 227/577 (39%), Positives = 339/577 (58%), Gaps = 41/577 (7%)

Query: 249 TGLVSFYSKCGEVERAELLFRDI-----VRPDLISCNAMISGYTCNGKTESSLRLFRQLL 303
           + LV+ ++  G+ E A  L  ++     V P++I+ N ++SG   +G+   ++     + 
Sbjct: 89  SALVAAHAARGDAEGAWRLLEEMRRDGGVEPNVITWNGLVSGLNRSGRARDAVVALATMH 148

Query: 304 ASAE-RVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEM 362
                R +++ +   +      G + +   +H + +K+G  +++ V+TAL  +Y +  + 
Sbjct: 149 GEGLLRPDATGVSCALSAVGDVGLVSVGQQLHGYAVKAGCRADACVVTALIDMYGKCGQA 208

Query: 363 EAARKLFDESSEKSLASWNAMIAGYT---------------------------------- 388
               ++FDESS   +AS NA+IAG +                                  
Sbjct: 209 AEVVRVFDESSHMDVASCNALIAGLSRNAQVCEALRLFKEFVDRGVELNVVSWTSIVACC 268

Query: 389 -QNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNI 447
            QNG   EA+  F+EMQA    PN VT+  +L A A + A+  G+  H     + F  ++
Sbjct: 269 VQNGKDLEAVEFFREMQAQGTEPNSVTIPCVLPAFANVAALMHGRSAHCFALRKGFLHDV 328

Query: 448 YVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHS 507
           YVS+AL+DMYAKCG + +AR +FD M  ++ V+WN MI GY ++G  + A+ +F  ML  
Sbjct: 329 YVSSALVDMYAKCGRVKDARIIFDTMVSRNVVSWNAMIGGYAMYGEAVNAVWMFHSMLKC 388

Query: 508 GIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEK 567
             +P  VTF  +L AC+ AGL  EG   F+ M +++G  P  EHYACMV +LGRAG+L++
Sbjct: 389 KQKPDMVTFTCLLAACTQAGLTEEGRHYFKEMHNEYGVSPRMEHYACMVTLLGRAGKLDE 448

Query: 568 ALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSA 627
           A + I  +  EP   +WG+LLG+C +H + +LA VA+EKLF L+PEN G +VLLSNIY++
Sbjct: 449 AYDLISDMPFEPDAYIWGSLLGSCRVHGNVDLAEVAAEKLFHLEPENAGNYVLLSNIYAS 508

Query: 628 ERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGK 687
           ++ + +   VR+++K   L K  GC+ IE+    H+  +GD  HP  TAI   + +LN +
Sbjct: 509 KKMWDRVNRVREMMKDVGLKKEKGCSWIEIKNKVHMLLAGDDSHPMMTAIIEKINQLNIQ 568

Query: 688 MREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDC 747
           MR+ GF   T   LHDVEE+EK+ ++ VHSEKLA+A GLI+T PGT +R+IKNLR+C DC
Sbjct: 569 MRKLGFVPSTDFVLHDVEEQEKDDILAVHSEKLAVALGLISTSPGTTLRVIKNLRICGDC 628

Query: 748 HTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           H A KFIS   GR I VRD NRFHHF GG CSCGD+W
Sbjct: 629 HEAMKFISSFEGREISVRDTNRFHHFSGGKCSCGDFW 665



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 117/482 (24%), Positives = 198/482 (41%), Gaps = 80/482 (16%)

Query: 87  MPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVG 146
           MP SS     H  ++ +  PD      + +A  +C    +   LH  A VSG   D FV 
Sbjct: 1   MPHSS--SLHHFLRHVSFPPDPH---LLPTAFKSCPTLPLARALHAVAEVSGLARDPFVA 55

Query: 147 AALVDLYFKFSWVKSARKVFDKMP------------------------------------ 170
           ++L+  Y +     +AR +FD MP                                    
Sbjct: 56  SSLLHAYLRLGTTGNARALFDGMPRPQRTVVGWSALVAAHAARGDAEGAWRLLEEMRRDG 115

Query: 171 --EKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRL 228
             E + + WN ++SGL ++   +D++     M   G    D+T V+  L AV +V  + +
Sbjct: 116 GVEPNVITWNGLVSGLNRSGRARDAVVALATMHGEGLLRPDATGVSCALSAVGDVGLVSV 175

Query: 229 GMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTC 288
           G ++    +K G      V+T L+  Y KCG+      +F +    D+ SCNA+I+G + 
Sbjct: 176 GQQLHGYAVKAGCRADACVVTALIDMYGKCGQAAEVVRVFDESSHMDVASCNALIAGLSR 235

Query: 289 NGKTESSLRL-----------------------------------FRQLLASAERVNSST 313
           N +   +LRL                                   FR++ A     NS T
Sbjct: 236 NAQVCEALRLFKEFVDRGVELNVVSWTSIVACCVQNGKDLEAVEFFREMQAQGTEPNSVT 295

Query: 314 IVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESS 373
           I  ++P F     L      H F L+ G + +  V +AL  +Y++   ++ AR +FD   
Sbjct: 296 IPCVLPAFANVAALMHGRSAHCFALRKGFLHDVYVSSALVDMYAKCGRVKDARIIFDTMV 355

Query: 374 EKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGK- 432
            +++ SWNAMI GY   G    A+ +F  M   K  P+ VT + +L+AC Q G    G+ 
Sbjct: 356 SRNVVSWNAMIGGYAMYGEAVNAVWMFHSMLKCKQKPDMVTFTCLLAACTQAGLTEEGRH 415

Query: 433 WVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEV-TWNTMISGYGLH 491
           +  E+         +     ++ +  + G + EA +L   M  + +   W +++    +H
Sbjct: 416 YFKEMHNEYGVSPRMEHYACMVTLLGRAGKLDEAYDLISDMPFEPDAYIWGSLLGSCRVH 475

Query: 492 GH 493
           G+
Sbjct: 476 GN 477



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 119/535 (22%), Positives = 195/535 (36%), Gaps = 123/535 (22%)

Query: 6   PQSRNLFLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFF 65
           P   +L  +  K   T       HA   + G   D    + L H       T  ARALF 
Sbjct: 17  PPDPHLLPTAFKSCPTLPLARALHAVAEVSGLARDPFVASSLLHAYLRLGTTGNARALFD 76

Query: 66  SIPKP--------------------------------------DLFLFNVIIRGFSNNEM 87
            +P+P                                      ++  +N ++ G + +  
Sbjct: 77  GMPRPQRTVVGWSALVAAHAARGDAEGAWRLLEEMRRDGGVEPNVITWNGLVSGLNRSGR 136

Query: 88  PKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGA 147
            + ++     +     L PD    S  LSA       S+G  LHG+A+ +G  +D  V  
Sbjct: 137 ARDAVVALATMHGEGLLRPDATGVSCALSAVGDVGLVSVGQQLHGYAVKAGCRADACVVT 196

Query: 148 ALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNG--- 204
           AL+D+Y K        +VFD+    D    N++I+GL +N    +++ +F + V  G   
Sbjct: 197 ALIDMYGKCGQAAEVVRVFDESSHMDVASCNALIAGLSRNAQVCEALRLFKEFVDRGVEL 256

Query: 205 -------------------------------GTWLDSTSVAAVLPAVAEVQELRLGMEIQ 233
                                          GT  +S ++  VLPA A V  L  G    
Sbjct: 257 NVVSWTSIVACCVQNGKDLEAVEFFREMQAQGTEPNSVTIPCVLPAFANVAALMHGRSAH 316

Query: 234 CLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTE 293
           C  L+ GF   VYV + LV  Y+KCG V+ A ++F  +V  +++S NAMI GY   G+  
Sbjct: 317 CFALRKGFLHDVYVSSALVDMYAKCGRVKDARIIFDTMVSRNVVSWNAMIGGYAMYGEAV 376

Query: 294 SSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALS 353
           +++ +F  +L   ++ +  T                  C+ + C ++G+           
Sbjct: 377 NAVWMFHSMLKCKQKPDMVTF----------------TCLLAACTQAGLT---------- 410

Query: 354 TVYSRLNEMEAARKLFDESSEK-----SLASWNAMIAGYTQNGLTEEAISLFQEMQASKV 408
                    E  R  F E   +      +  +  M+    + G  +EA  L  +M     
Sbjct: 411 ---------EEGRHYFKEMHNEYGVSPRMEHYACMVTLLGRAGKLDEAYDLISDM---PF 458

Query: 409 APNPVTVSSILSACAQLGAISLGKWVHELVKSRNFE--------SNIYVSTALID 455
            P+     S+L +C   G + L +   E +     E        SNIY S  + D
Sbjct: 459 EPDAYIWGSLLGSCRVHGNVDLAEVAAEKLFHLEPENAGNYVLLSNIYASKKMWD 513


>gi|225439325|ref|XP_002267596.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g06540-like [Vitis vinifera]
          Length = 623

 Score =  443 bits (1140), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 230/565 (40%), Positives = 340/565 (60%), Gaps = 51/565 (9%)

Query: 261 VERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIP- 319
           ++ A  +F  I  P+L   NAMI G++ +   + +   + Q          S   GL+P 
Sbjct: 69  IDYASRIFSQIQNPNLFIFNAMIRGHSGSKNPDQAFHFYVQ----------SQRQGLLPD 118

Query: 320 -VFYPFGHLHLT--NCI------HSFCLKSGI-----VSNSSV----------------- 348
            + +PF     T  +CI      H   +K G      V NS V                 
Sbjct: 119 NLTFPFLVKSCTKLHCISMGSQAHGHIIKHGFEKDVYVQNSLVHMYATFGDTEAATLIFQ 178

Query: 349 ---------LTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISL 399
                     T++   +++  ++E+ARKLFD+  EK+L +W+ MI+GY QN   ++A+ L
Sbjct: 179 RMYYVDVVSWTSMIRGFNKCGDVESARKLFDQMPEKNLVTWSTMISGYAQNNHFDKAVEL 238

Query: 400 FQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAK 459
           F+ +Q+  V  N   + S++S+CA LGA+ LG+  H+ V       N+ + TAL+DMYA+
Sbjct: 239 FKVLQSQGVRANETVMVSVISSCAHLGALELGERAHDYVVKNGMTLNLILGTALVDMYAR 298

Query: 460 CGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSV 519
           CG+I +A  +F+ +  +  ++W  +I+G  +HG+   +L+ F+ M+ +G+ P  +TF +V
Sbjct: 299 CGSIDKAVWVFEDLPERDTLSWTALIAGLAMHGYSERSLKYFATMVEAGLTPRDITFTAV 358

Query: 520 LYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEP 579
           L ACSH GLV  G +IF+SM  DH  +P  EHY CMVD+LGRAG+LE+A  F+  + V+P
Sbjct: 359 LSACSHGGLVERGFQIFESMKRDHRVEPRLEHYGCMVDLLGRAGKLEEAERFVLKMPVKP 418

Query: 580 GPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQ 639
              VWGALLGAC IHK+  +     + L +L P++ GY+VLLSNIY+  +++ +   +RQ
Sbjct: 419 NAPVWGALLGACRIHKNAEIGERVGKILIQLLPQHSGYYVLLSNIYANAKEWEKVTEMRQ 478

Query: 640 VVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVT 699
           ++K + L K PG +LIE+ G  H FT GD  HP+   I  M E++  ++R AG++  T  
Sbjct: 479 MMKAKGLKKPPGHSLIELDGRVHKFTIGDSSHPEMDKIERMWEEILMRIRAAGYRGNTAD 538

Query: 700 ALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTG 759
           AL D++EEEKE  +  HSEKLAIAFG++ +E GT IRI+KNLRVC DCHTATK ISKV G
Sbjct: 539 ALFDIDEEEKESALHRHSEKLAIAFGMMRSEAGTPIRIVKNLRVCEDCHTATKLISKVFG 598

Query: 760 RVIVVRDANRFHHFKGGVCSCGDYW 784
           R ++VRD NRFHHF+ G+CSC DYW
Sbjct: 599 RELIVRDRNRFHHFRQGLCSCMDYW 623



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 113/450 (25%), Positives = 194/450 (43%), Gaps = 69/450 (15%)

Query: 59  YARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAA 118
           YA  +F  I  P+LF+FN +IRG S ++ P  +  FY   ++   L PDN T+ F++ + 
Sbjct: 71  YASRIFSQIQNPNLFIFNAMIRGHSGSKNPDQAFHFYVQSQRQ-GLLPDNLTFPFLVKSC 129

Query: 119 SACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWN 178
           +     S+G   HGH I  G+  D++V  +LV +Y  F   ++A  +F +M   D V W 
Sbjct: 130 TKLHCISMGSQAHGHIIKHGFEKDVYVQNSLVHMYATFGDTEAATLIFQRMYYVDVVSWT 189

Query: 179 S-------------------------------MISGLMKNCCFQDSIWVFGDMVRNGGTW 207
           S                               MISG  +N  F  ++ +F  ++++ G  
Sbjct: 190 SMIRGFNKCGDVESARKLFDQMPEKNLVTWSTMISGYAQNNHFDKAVELF-KVLQSQGVR 248

Query: 208 LDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELL 267
            + T + +V+ + A +  L LG       +K G   ++ + T LV  Y++CG +++A  +
Sbjct: 249 ANETVMVSVISSCAHLGALELGERAHDYVVKNGMTLNLILGTALVDMYARCGSIDKAVWV 308

Query: 268 FRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHL 327
           F D+   D +S  A+I+G   +G +E SL+ F  ++ +          GL P    F  +
Sbjct: 309 FEDLPERDTLSWTALIAGLAMHGYSERSLKYFATMVEA----------GLTPRDITFTAV 358

Query: 328 HLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGY 387
            L+ C H   ++ G                     E+ ++  D   E  L  +  M+   
Sbjct: 359 -LSACSHGGLVERG-----------------FQIFESMKR--DHRVEPRLEHYGCMVDLL 398

Query: 388 TQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHE-LVKSRNFESN 446
            + G  EEA     +M    V PN     ++L AC       +G+ V + L++     S 
Sbjct: 399 GRAGKLEEAERFVLKM---PVKPNAPVWGALLGACRIHKNAEIGERVGKILIQLLPQHSG 455

Query: 447 IYVSTALIDMYAKCGNIVEARELFDLMSHK 476
            YV   L ++YA      +  E+  +M  K
Sbjct: 456 YYV--LLSNIYANAKEWEKVTEMRQMMKAK 483



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 99/416 (23%), Positives = 181/416 (43%), Gaps = 42/416 (10%)

Query: 115 LSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAAL----VDLYFKFSWVKSARKVFDKMP 170
           L +   C D +   ++H + I +    D+F  + L    VD     S +  A ++F ++ 
Sbjct: 21  LFSLETCSDLTHLKIIHAYMIRTHIICDVFAASRLIAFCVDPSSGTSLIDYASRIFSQIQ 80

Query: 171 EKDTVLWNSMISGLM--KNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRL 228
             +  ++N+MI G    KN    D  + F    +  G   D+ +   ++ +  ++  + +
Sbjct: 81  NPNLFIFNAMIRGHSGSKN---PDQAFHFYVQSQRQGLLPDNLTFPFLVKSCTKLHCISM 137

Query: 229 GMEIQCLGLKLGFHDHVYVLTGLVSFYS-------------------------------K 257
           G +     +K GF   VYV   LV  Y+                               K
Sbjct: 138 GSQAHGHIIKHGFEKDVYVQNSLVHMYATFGDTEAATLIFQRMYYVDVVSWTSMIRGFNK 197

Query: 258 CGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGL 317
           CG+VE A  LF  +   +L++ + MISGY  N   + ++ LF+ L +   R N + +V +
Sbjct: 198 CGDVESARKLFDQMPEKNLVTWSTMISGYAQNNHFDKAVELFKVLQSQGVRANETVMVSV 257

Query: 318 IPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSL 377
           I      G L L    H + +K+G+  N  + TAL  +Y+R   ++ A  +F++  E+  
Sbjct: 258 ISSCAHLGALELGERAHDYVVKNGMTLNLILGTALVDMYARCGSIDKAVWVFEDLPERDT 317

Query: 378 ASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHEL 437
            SW A+IAG   +G +E ++  F  M  + + P  +T +++LSAC+  G +  G  + E 
Sbjct: 318 LSWTALIAGLAMHGYSERSLKYFATMVEAGLTPRDITFTAVLSACSHGGLVERGFQIFES 377

Query: 438 VK-SRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEV-TWNTMISGYGLH 491
           +K     E  +     ++D+  + G + EA      M  K     W  ++    +H
Sbjct: 378 MKRDHRVEPRLEHYGCMVDLLGRAGKLEEAERFVLKMPVKPNAPVWGALLGACRIH 433



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 82/327 (25%), Positives = 155/327 (47%), Gaps = 39/327 (11%)

Query: 333 IHSFCLKSGIVSN----SSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYT 388
           IH++ +++ I+ +    S ++       S  + ++ A ++F +    +L  +NAMI G++
Sbjct: 36  IHAYMIRTHIICDVFAASRLIAFCVDPSSGTSLIDYASRIFSQIQNPNLFIFNAMIRGHS 95

Query: 389 QNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIY 448
            +   ++A   + + Q   + P+ +T   ++ +C +L  IS+G   H  +    FE ++Y
Sbjct: 96  GSKNPDQAFHFYVQSQRQGLLPDNLTFPFLVKSCTKLHCISMGSQAHGHIIKHGFEKDVY 155

Query: 449 VSTALIDMYA-------------------------------KCGNIVEARELFDLMSHKS 477
           V  +L+ MYA                               KCG++  AR+LFD M  K+
Sbjct: 156 VQNSLVHMYATFGDTEAATLIFQRMYYVDVVSWTSMIRGFNKCGDVESARKLFDQMPEKN 215

Query: 478 EVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQ 537
            VTW+TMISGY  + H  +A++LF  +   G+R +    +SV+ +C+H G +  G+    
Sbjct: 216 LVTWSTMISGYAQNNHFDKAVELFKVLQSQGVRANETVMVSVISSCAHLGALELGERAHD 275

Query: 538 SMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIH--K 595
            ++ +     L    A +VD+  R G ++KA+   + L  E     W AL+    +H   
Sbjct: 276 YVVKNGMTLNLILGTA-LVDMYARCGSIDKAVWVFEDLP-ERDTLSWTALIAGLAMHGYS 333

Query: 596 DTNLARVASEKLFELDPENVGYHVLLS 622
           + +L   A+     L P ++ +  +LS
Sbjct: 334 ERSLKYFATMVEAGLTPRDITFTAVLS 360


>gi|357521295|ref|XP_003630936.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355524958|gb|AET05412.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 959

 Score =  442 bits (1138), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 248/670 (37%), Positives = 381/670 (56%), Gaps = 8/670 (1%)

Query: 36  GFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFY 95
           GF  DL   + L    +D      A+ LF  +P  D  L+NV++ G+  N    S++  +
Sbjct: 207 GFHMDLFIGSSLIKLYTDNGYIHDAKYLFDELPVRDCILWNVMLNGYVKNGDFNSALGTF 266

Query: 96  THLRKNTALTPDNFTYSFVLSAASACCDRSI---GVLLHGHAIVSGYGSDLFVGAALVDL 152
             +R N+ + P++ ++  +LS    C  R I   G+ LHG  I SG+ SD  V   ++ +
Sbjct: 267 QEMR-NSCVKPNSVSFVCLLSV---CATRGIVRAGIQLHGLVIRSGFESDPTVANTIITM 322

Query: 153 YFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTS 212
           Y K   +  ARK+FD MP+ DTV WN +I+G ++N    +++ +F  MV   G  LDS +
Sbjct: 323 YSKCGNLFDARKIFDIMPQTDTVTWNGLIAGYVQNGFTDEAVALFKAMV-TSGVKLDSIT 381

Query: 213 VAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIV 272
            A+ LP+V +   L+   E+    ++ G    VY+ + LV  Y K G+VE A   F+   
Sbjct: 382 FASFLPSVLKSGSLKYCKEVHSYIVRHGVPFDVYLKSALVDIYFKGGDVEMACKTFQQNT 441

Query: 273 RPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNC 332
             D+  C AMISGY  NG    +L LFR L+      N  T+  ++P       L L   
Sbjct: 442 LVDVAVCTAMISGYVLNGLNVEALNLFRWLIQEGMVPNCLTMASVLPACAALASLKLGKE 501

Query: 333 IHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGL 392
           +H   LK G+ +   V ++++ +Y++   ++ A + F     K    WN MI  ++QNG 
Sbjct: 502 LHCDILKKGLENVCQVGSSITYMYAKSGRLDLAYQFFRRMPVKDSVCWNLMIVSFSQNGK 561

Query: 393 TEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTA 452
            E AI LF++M  S    + V++S+ LSACA   A+  GK +H  V   +F S+ +V++ 
Sbjct: 562 PELAIDLFRQMGTSGTKFDSVSLSATLSACANYPALYYGKELHCFVVRNSFISDTFVAST 621

Query: 453 LIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPS 512
           LIDMY+KCG +  AR +FD+M  K+EV+WN++I+ YG HG   E L LF EM+ +GI+P 
Sbjct: 622 LIDMYSKCGKLALARSVFDMMDWKNEVSWNSIIAAYGNHGRPRECLDLFHEMVEAGIQPD 681

Query: 513 GVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFI 572
            VTFL ++ AC HAGLV EG   F+ M  ++G     EH+ACMVD+ GRAG+L +A + I
Sbjct: 682 HVTFLVIMSACGHAGLVDEGIYYFRCMTEEYGICARMEHFACMVDLYGRAGRLHEAFDTI 741

Query: 573 KGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYL 632
           K +   P    WG+LLGAC +H +  LA++AS+ L ELDP N GY+VLLSN+++   ++ 
Sbjct: 742 KSMPFTPDAGTWGSLLGACRLHGNVELAKLASKHLVELDPNNSGYYVLLSNVHAGAGEWE 801

Query: 633 QAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAG 692
               VR ++K++ + K PG + I+V G  H+F++ D  HPQS  IY +L+ L  ++R+ G
Sbjct: 802 SVLKVRSLMKEKGVQKIPGYSWIDVNGGTHMFSAADGCHPQSVEIYLILKNLLLELRKHG 861

Query: 693 FQTETVTALH 702
           +  +    LH
Sbjct: 862 YVPQPYLPLH 871



 Score =  245 bits (626), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 153/554 (27%), Positives = 284/554 (51%), Gaps = 15/554 (2%)

Query: 21  TQSQLTQTHAQIIIHGFQNDLSTVTK------LAHRLSDFKATCYARALFFSIPKPDLFL 74
            + Q+ Q HA++++ G    L+  ++      L     D         L +S+P      
Sbjct: 91  VKQQVRQIHAKVLVCGMNGSLTLGSRMLGMYVLCRSFKDVGNLFCRLQLCYSLP------ 144

Query: 75  FNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHA 134
           +N +IRGFS       ++ F+  +   + + PD +T+ +V+ A     +  +  ++H  A
Sbjct: 145 WNWLIRGFSMLGCFDFALMFFFRML-GSNVAPDKYTFPYVIKACGGLNNVPLCKMVHELA 203

Query: 135 IVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSI 194
              G+  DLF+G++L+ LY    ++  A+ +FD++P +D +LWN M++G +KN  F  ++
Sbjct: 204 RSMGFHMDLFIGSSLIKLYTDNGYIHDAKYLFDELPVRDCILWNVMLNGYVKNGDFNSAL 263

Query: 195 WVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSF 254
             F +M RN     +S S   +L   A    +R G+++  L ++ GF     V   +++ 
Sbjct: 264 GTFQEM-RNSCVKPNSVSFVCLLSVCATRGIVRAGIQLHGLVIRSGFESDPTVANTIITM 322

Query: 255 YSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTI 314
           YSKCG +  A  +F  + + D ++ N +I+GY  NG T+ ++ LF+ ++ S  +++S T 
Sbjct: 323 YSKCGNLFDARKIFDIMPQTDTVTWNGLIAGYVQNGFTDEAVALFKAMVTSGVKLDSITF 382

Query: 315 VGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSE 374
              +P     G L     +HS+ ++ G+  +  + +AL  +Y +  ++E A K F +++ 
Sbjct: 383 ASFLPSVLKSGSLKYCKEVHSYIVRHGVPFDVYLKSALVDIYFKGGDVEMACKTFQQNTL 442

Query: 375 KSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWV 434
             +A   AMI+GY  NGL  EA++LF+ +    + PN +T++S+L ACA L ++ LGK +
Sbjct: 443 VDVAVCTAMISGYVLNGLNVEALNLFRWLIQEGMVPNCLTMASVLPACAALASLKLGKEL 502

Query: 435 HELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHG 494
           H  +  +  E+   V +++  MYAK G +  A + F  M  K  V WN MI  +  +G  
Sbjct: 503 HCDILKKGLENVCQVGSSITYMYAKSGRLDLAYQFFRRMPVKDSVCWNLMIVSFSQNGKP 562

Query: 495 LEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYAC 554
             A+ LF +M  SG +   V+  + L AC++   +  G E+    +  + F       + 
Sbjct: 563 ELAIDLFRQMGTSGTKFDSVSLSATLSACANYPALYYGKEL-HCFVVRNSFISDTFVAST 621

Query: 555 MVDILGRAGQLEKA 568
           ++D+  + G+L  A
Sbjct: 622 LIDMYSKCGKLALA 635



 Score =  196 bits (498), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 122/449 (27%), Positives = 226/449 (50%), Gaps = 2/449 (0%)

Query: 130 LHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCC 189
           +H   +V G    L +G+ ++ +Y      K    +F ++    ++ WN +I G     C
Sbjct: 98  IHAKVLVCGMNGSLTLGSRMLGMYVLCRSFKDVGNLFCRLQLCYSLPWNWLIRGFSMLGC 157

Query: 190 FQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLT 249
           F  ++  F  M+       D  +   V+ A   +  + L   +  L   +GFH  +++ +
Sbjct: 158 FDFALMFFFRML-GSNVAPDKYTFPYVIKACGGLNNVPLCKMVHELARSMGFHMDLFIGS 216

Query: 250 GLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERV 309
            L+  Y+  G +  A+ LF ++   D I  N M++GY  NG   S+L  F+++  S  + 
Sbjct: 217 SLIKLYTDNGYIHDAKYLFDELPVRDCILWNVMLNGYVKNGDFNSALGTFQEMRNSCVKP 276

Query: 310 NSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLF 369
           NS + V L+ V    G +     +H   ++SG  S+ +V   + T+YS+   +  ARK+F
Sbjct: 277 NSVSFVCLLSVCATRGIVRAGIQLHGLVIRSGFESDPTVANTIITMYSKCGNLFDARKIF 336

Query: 370 DESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAIS 429
           D   +    +WN +IAGY QNG T+EA++LF+ M  S V  + +T +S L +  + G++ 
Sbjct: 337 DIMPQTDTVTWNGLIAGYVQNGFTDEAVALFKAMVTSGVKLDSITFASFLPSVLKSGSLK 396

Query: 430 LGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYG 489
             K VH  +       ++Y+ +AL+D+Y K G++  A + F   +         MISGY 
Sbjct: 397 YCKEVHSYIVRHGVPFDVYLKSALVDIYFKGGDVEMACKTFQQNTLVDVAVCTAMISGYV 456

Query: 490 LHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLA 549
           L+G  +EAL LF  ++  G+ P+ +T  SVL AC+    ++ G E+   ++   G + + 
Sbjct: 457 LNGLNVEALNLFRWLIQEGMVPNCLTMASVLPACAALASLKLGKELHCDIL-KKGLENVC 515

Query: 550 EHYACMVDILGRAGQLEKALEFIKGLAVE 578
           +  + +  +  ++G+L+ A +F + + V+
Sbjct: 516 QVGSSITYMYAKSGRLDLAYQFFRRMPVK 544


>gi|326499323|dbj|BAK06152.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 580

 Score =  442 bits (1138), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 233/513 (45%), Positives = 331/513 (64%), Gaps = 2/513 (0%)

Query: 274 PDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCI 333
           PD    +++      +G   +++  +R LL++A   +S T   +         L     I
Sbjct: 68  PDSFLFSSLTRTAAHHGLPVAAIAFYRGLLSAALPFSSFTFTAVAKACADLSALRTGAAI 127

Query: 334 HSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLT 393
           H+  +  G  S+  VLTAL  +YS+  ++  ARKLFD   ++S+ +WNAMI+GY QNGL 
Sbjct: 128 HAHSILLGFGSDRFVLTALVVLYSKCGQLGVARKLFDAIRDRSVVAWNAMISGYEQNGLA 187

Query: 394 EEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTAL 453
           E  I +++EMQA+K  P+ +T  + LSACAQ GA+ LG+ V   V S   + ++++ +AL
Sbjct: 188 ERGIGVYKEMQAAKAVPDSMTFVATLSACAQAGALDLGREVERRVVSERMDISVFLGSAL 247

Query: 454 IDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSG 513
           ++MYA+CG + +AR  FD +  ++ VTW +MI+GYG+HGHG EA++LF  M   G  P+ 
Sbjct: 248 VNMYARCGVVDKARRWFDALQERNVVTWTSMIAGYGMHGHGREAIKLFHLMRCEGPPPNH 307

Query: 514 VTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIK 573
           VTF++VL AC+HAGLV EG + F  M   +G  P  EHY  MVD+ GRAG L++A++FI 
Sbjct: 308 VTFVAVLSACAHAGLVMEGRDAFACMKRVYGLVPRVEHYCSMVDMFGRAGLLDEAMQFIS 367

Query: 574 G-LAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYL 632
             +  EPGP VW A+LGAC +HK+ NL    +E+L  L+PEN  YHVLLSNIY+      
Sbjct: 368 DYMPGEPGPEVWTAVLGACKMHKNFNLGVEVAERLIALEPENPSYHVLLSNIYALSGKMH 427

Query: 633 QAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAG 692
               VR  + KR+L K  G +LIE+GGT H+F  G++ HPQ+T IY  LE+L  ++  AG
Sbjct: 428 HVEKVRNTMIKRRLKKQIGFSLIELGGTSHLFRMGEKSHPQTTEIYHYLEELIHRITAAG 487

Query: 693 FQTETVTALHDVEEEEKELMMKVHSEKLAIAFGL-IATEPGTEIRIIKNLRVCLDCHTAT 751
           +  ET + LH++EEEE+E  ++ HSEKLA+A+GL ++    T IR+IKNLR+C DCH A 
Sbjct: 488 YMPETESVLHELEEEEREGALRYHSEKLAVAYGLMMSVGSTTPIRVIKNLRICGDCHLAI 547

Query: 752 KFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           KF+S V  R IVVRD +RFHHFK G CSC +YW
Sbjct: 548 KFMSAVENREIVVRDKHRFHHFKDGKCSCLEYW 580



 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 135/484 (27%), Positives = 223/484 (46%), Gaps = 56/484 (11%)

Query: 5   TPQSRNLFLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALF 64
           +P+  +L L+  +G      L Q HA++++ G    L  +TKLA       A  YA  L 
Sbjct: 7   SPEHSSLLLAGPRGGP----LKQAHARLVVTGHGRSLPLITKLATLAVAAGAAPYAHLLA 62

Query: 65  FSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDR 124
            S P PD FLF+ + R  +++ +P ++I FY  L  + AL   +FT++ V   A AC D 
Sbjct: 63  TSHPAPDSFLFSSLTRTAAHHGLPVAAIAFYRGL-LSAALPFSSFTFTAV---AKACADL 118

Query: 125 S---IGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMI 181
           S    G  +H H+I+ G+GSD FV  ALV LY K   +  ARK+FD + ++  V WN+MI
Sbjct: 119 SALRTGAAIHAHSILLGFGSDRFVLTALVVLYSKCGQLGVARKLFDAIRDRSVVAWNAMI 178

Query: 182 SGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGF 241
           SG  +N   +  I V+ +M +      DS +  A L A A+   L LG E++   +    
Sbjct: 179 SGYEQNGLAERGIGVYKEM-QAAKAVPDSMTFVATLSACAQAGALDLGREVERRVVSERM 237

Query: 242 HDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQ 301
              V++ + LV+ Y++CG V++A   F  +   ++++  +MI+GY  +G    +++LF  
Sbjct: 238 DISVFLGSALVNMYARCGVVDKARRWFDALQERNVVTWTSMIAGYGMHGHGREAIKLFHL 297

Query: 302 LLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNE 361
           +       N  T V +           L+ C H+  +  G          +  VY  +  
Sbjct: 298 MRCEGPPPNHVTFVAV-----------LSACAHAGLVMEG----RDAFACMKRVYGLVPR 342

Query: 362 MEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSA 421
           +E                + +M+  + + GL +EA+    +    +  P P   +++L A
Sbjct: 343 VE---------------HYCSMVDMFGRAGLLDEAMQFISDYMPGE--PGPEVWTAVLGA 385

Query: 422 CAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTW 481
           C      +LG  V E + +   E+  Y    L ++YA  G +           H  E   
Sbjct: 386 CKMHKNFNLGVEVAERLIALEPENPSY-HVLLSNIYALSGKM-----------HHVEKVR 433

Query: 482 NTMI 485
           NTMI
Sbjct: 434 NTMI 437


>gi|77553706|gb|ABA96502.1| SEC14 cytosolic factor, putative [Oryza sativa Japonica Group]
 gi|125535837|gb|EAY82325.1| hypothetical protein OsI_37535 [Oryza sativa Indica Group]
 gi|125578563|gb|EAZ19709.1| hypothetical protein OsJ_35285 [Oryza sativa Japonica Group]
          Length = 630

 Score =  442 bits (1138), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 228/586 (38%), Positives = 345/586 (58%)

Query: 199 DMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKC 258
           ++VR     +D  ++  +L   A+ + L +G     L +  G          L++ Y+KC
Sbjct: 45  NLVRVERDLIDVFTLHELLQLCAKRRSLLVGKSCHGLAIHFGLVTDTVTCNILINLYTKC 104

Query: 259 GEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLI 318
           G+ + A  +F  +    +IS N MI+GYT N +   +L+LF ++     ++   T+   +
Sbjct: 105 GQNDCARRVFDAMSVRSIISWNTMIAGYTHNREDVEALKLFSRMHREGTQMTEFTLSSTL 164

Query: 319 PVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLA 378
                   +     +H+  +K  + S+S V TA   VY++ N ++ A  +F+   EK+  
Sbjct: 165 CACAAKYAIIECKQLHTIAIKLALDSSSFVGTAFLDVYAKCNMIKDACWVFENMPEKTSV 224

Query: 379 SWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELV 438
           +W+++ AG+ QNGL EE + LFQ  Q   +     TVSSILS CA L  I  G  VH ++
Sbjct: 225 TWSSLFAGFVQNGLHEEVLCLFQSTQREGMQLTEFTVSSILSTCASLALIIEGTQVHAVI 284

Query: 439 KSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEAL 498
               F  N++V+T+L+D+YAKCG I ++ E+F  M  K+ V WN MI+ +  H H  EA+
Sbjct: 285 VKHGFHRNLFVATSLVDVYAKCGQIEKSYEVFADMEEKNVVLWNAMIASFSRHAHSWEAM 344

Query: 499 QLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDI 558
            LF +M   GI P+ VT+LS+L ACSH GLV EG   F  ++ D   +P   HY+CMVD+
Sbjct: 345 ILFEKMQQVGIFPNEVTYLSILSACSHTGLVEEGRHYFNLLLSDRTAEPNVLHYSCMVDV 404

Query: 559 LGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYH 618
           LGR+G+ ++A + +  +  EP  ++WG+LLG+  IHK+  LAR+A+E+LF L+PEN G H
Sbjct: 405 LGRSGKTDEAWKLLDKMPFEPTASMWGSLLGSSRIHKNIRLARIAAEQLFRLEPENGGNH 464

Query: 619 VLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIY 678
           VLLSN+Y+A  ++      R+ ++     K  G + IE  G  HVF +G++ HP  T +Y
Sbjct: 465 VLLSNVYAASGNWENVVVARKYLRDSGAKKEMGRSWIEAKGKIHVFVAGEREHPGITDVY 524

Query: 679 AMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRII 738
             LE++  +MR+   +  T   LHDV  ++KE ++K HSEKLA AFGLI+  P   I I 
Sbjct: 525 NKLEEIYHEMRKISHRANTQCDLHDVHADQKEELLKHHSEKLAFAFGLISLPPNIPITIY 584

Query: 739 KNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           KNLR+C DCH+  K +S +T R ++VRD NRFHHFK G CSCGD+W
Sbjct: 585 KNLRICGDCHSFMKIVSCITERQVIVRDINRFHHFKDGSCSCGDFW 630



 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 108/415 (26%), Positives = 199/415 (47%), Gaps = 11/415 (2%)

Query: 97  HLRKNTALTPDNFTYSFVLSAASACCDRS----IGVLLHGHAIVSGYGSDLFVGAALVDL 152
           H  KN      +    F L      C +     +G   HG AI  G  +D      L++L
Sbjct: 41  HKDKNLVRVERDLIDVFTLHELLQLCAKRRSLLVGKSCHGLAIHFGLVTDTVTCNILINL 100

Query: 153 YFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTS 212
           Y K      AR+VFD M  +  + WN+MI+G   N    +++ +F  M R  GT +   +
Sbjct: 101 YTKCGQNDCARRVFDAMSVRSIISWNTMIAGYTHNREDVEALKLFSRMHRE-GTQMTEFT 159

Query: 213 VAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIV 272
           +++ L A A    +    ++  + +KL      +V T  +  Y+KC  ++ A  +F ++ 
Sbjct: 160 LSSTLCACAAKYAIIECKQLHTIAIKLALDSSSFVGTAFLDVYAKCNMIKDACWVFENMP 219

Query: 273 RPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNC 332
               ++ +++ +G+  NG  E  L LF+       ++   T+  ++        +     
Sbjct: 220 EKTSVTWSSLFAGFVQNGLHEEVLCLFQSTQREGMQLTEFTVSSILSTCASLALIIEGTQ 279

Query: 333 IHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGL 392
           +H+  +K G   N  V T+L  VY++  ++E + ++F +  EK++  WNAMIA ++++  
Sbjct: 280 VHAVIVKHGFHRNLFVATSLVDVYAKCGQIEKSYEVFADMEEKNVVLWNAMIASFSRHAH 339

Query: 393 TEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGK-WVHELVKSRNFESNIYVST 451
           + EA+ LF++MQ   + PN VT  SILSAC+  G +  G+ + + L+  R  E N+   +
Sbjct: 340 SWEAMILFEKMQQVGIFPNEVTYLSILSACSHTGLVEEGRHYFNLLLSDRTAEPNVLHYS 399

Query: 452 ALIDMYAKCGNIVEARELFDLMSHKSEVT-WNTMISGYGLHGH----GLEALQLF 501
            ++D+  + G   EA +L D M  +   + W +++    +H +     + A QLF
Sbjct: 400 CMVDVLGRSGKTDEAWKLLDKMPFEPTASMWGSLLGSSRIHKNIRLARIAAEQLF 454



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 98/397 (24%), Positives = 183/397 (46%), Gaps = 54/397 (13%)

Query: 19  AKTQSQLT--QTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFN 76
           AK +S L     H   I  G   D  T   L +  +       AR +F ++    +  +N
Sbjct: 67  AKRRSLLVGKSCHGLAIHFGLVTDTVTCNILINLYTKCGQNDCARRVFDAMSVRSIISWN 126

Query: 77  VIIRGFSNNEMPKSSICFYTHL-RKNTALTPDNFTYSFVLSAASACCDRSIGVL----LH 131
            +I G+++N     ++  ++ + R+ T +T       F LS+    C     ++    LH
Sbjct: 127 TMIAGYTHNREDVEALKLFSRMHREGTQMT------EFTLSSTLCACAAKYAIIECKQLH 180

Query: 132 GHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQ 191
             AI     S  FVG A +D+Y K + +K A  VF+ MPEK +V W+S+ +G ++N   +
Sbjct: 181 TIAIKLALDSSSFVGTAFLDVYAKCNMIKDACWVFENMPEKTSVTWSSLFAGFVQNGLHE 240

Query: 192 DSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGL 251
           + + +F    R G   L   +V+++L   A +  +  G ++  + +K GFH +++V T L
Sbjct: 241 EVLCLFQSTQREGMQ-LTEFTVSSILSTCASLALIIEGTQVHAVIVKHGFHRNLFVATSL 299

Query: 252 VSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNS 311
           V  Y+KCG++E++  +F D+   +++  NAMI+ ++ +  +  ++ LF ++         
Sbjct: 300 VDVYAKCGQIEKSYEVFADMEEKNVVLWNAMIASFSRHAHSWEAMILFEKMQQ------- 352

Query: 312 STIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLF-- 369
              VG+ P                       V+  S+L+A     S    +E  R  F  
Sbjct: 353 ---VGIFP---------------------NEVTYLSILSAC----SHTGLVEEGRHYFNL 384

Query: 370 ---DESSEKSLASWNAMIAGYTQNGLTEEAISLFQEM 403
              D ++E ++  ++ M+    ++G T+EA  L  +M
Sbjct: 385 LLSDRTAEPNVLHYSCMVDVLGRSGKTDEAWKLLDKM 421


>gi|449481169|ref|XP_004156102.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Cucumis sativus]
          Length = 642

 Score =  442 bits (1137), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 234/575 (40%), Positives = 337/575 (58%), Gaps = 50/575 (8%)

Query: 248 LTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQL---LA 304
           LTGL     K G    A +L R + +P  +  + M++ Y  +G  +SS+ +F  +     
Sbjct: 80  LTGLNML--KLGHQVHAHMLLRGL-QPTALVGSKMVAFYASSGDIDSSVSVFNGIGDYFT 136

Query: 305 SAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEA 364
               + SS  V L+ V+       +  C+H   L+ G+  +  V T+L  +Y +  E+  
Sbjct: 137 FPFVLKSS--VELLSVW-------MGKCVHGLILRIGLQFDLYVATSLIILYGKCGEIND 187

Query: 365 ARKLFDESSEKSLASWNAMIAGYT-------------------------------QNGLT 393
           A K+FD  + + ++SWNA++AGYT                               Q+GL 
Sbjct: 188 AGKVFDNMTIRDVSSWNALLAGYTKSGCIDAALAIFERMPWRNIVSWTTMISGYSQSGLA 247

Query: 394 EEAISLFQEM--QASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVST 451
           ++A+SLF EM  + S V PN VT+ S+L ACAQL  +  G+ +HEL       SN  V  
Sbjct: 248 QQALSLFDEMVKEDSGVRPNWVTIMSVLPACAQLSTLERGRQIHELACRMGLNSNASVLI 307

Query: 452 ALIDMYAKCGNIVEARELFDLMSH--KSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGI 509
           AL  MYAKCG++V+AR  FD ++   K+ + WNTMI+ Y  +GHGL+A+  F EM+ +GI
Sbjct: 308 ALTAMYAKCGSLVDARNCFDKLNRNEKNLIAWNTMITAYASYGHGLQAVSTFREMIQAGI 367

Query: 510 RPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKAL 569
           +P  +TF  +L  CSH+GLV  G + F  M   +   P  EHYAC+ D+LGRAG+L +A 
Sbjct: 368 QPDDITFTGLLSGCSHSGLVDVGLKYFNHMSTTYSINPRVEHYACVADLLGRAGRLAEAS 427

Query: 570 EFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAER 629
           + +  + +  GP++WG+LL AC  H++  +A  A+ KLF L+PEN G +VLLSN+Y+   
Sbjct: 428 KLVGEMPMPAGPSIWGSLLAACRKHRNLEMAETAARKLFVLEPENTGNYVLLSNMYAEAG 487

Query: 630 DYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMR 689
            + +   +R +VK +   K+PGC+ IE+ G  H+F  GD  HPQ   IY  LE L  KM+
Sbjct: 488 RWQEVDKLRAIVKSQGTKKSPGCSWIEINGKAHMFLGGDTSHPQGKEIYMFLEALPEKMK 547

Query: 690 EAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHT 749
            AG+  +T   LHD+ EEEKE  +  HSEKLA+AFG++ T   T +R+ KNLR+C DCHT
Sbjct: 548 AAGYFPDTSYVLHDISEEEKEFNLIAHSEKLAVAFGILNTPAETVLRVTKNLRICGDCHT 607

Query: 750 ATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           A  FIS++ GR ++VRD NRFHHFKGG CSCGDYW
Sbjct: 608 AMVFISEIYGREVIVRDINRFHHFKGGCCSCGDYW 642



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 75/285 (26%), Positives = 127/285 (44%), Gaps = 49/285 (17%)

Query: 107 DNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVF 166
           D FT+ FVL ++       +G  +HG  +  G   DL+V  +L+ LY K   +  A KVF
Sbjct: 133 DYFTFPFVLKSSVELLSVWMGKCVHGLILRIGLQFDLYVATSLIILYGKCGEINDAGKVF 192

Query: 167 DKMPEKDTVLWNSMISGLMKNCCF-------------------------------QDSIW 195
           D M  +D   WN++++G  K+ C                                Q ++ 
Sbjct: 193 DNMTIRDVSSWNALLAGYTKSGCIDAALAIFERMPWRNIVSWTTMISGYSQSGLAQQALS 252

Query: 196 VFGDMVR-NGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSF 254
           +F +MV+ + G   +  ++ +VLPA A++  L  G +I  L  ++G + +  VL  L + 
Sbjct: 253 LFDEMVKEDSGVRPNWVTIMSVLPACAQLSTLERGRQIHELACRMGLNSNASVLIALTAM 312

Query: 255 YSKCGEVERAELLFRDIVR--PDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSS 312
           Y+KCG +  A   F  + R   +LI+ N MI+ Y   G    ++  FR+++ +  + +  
Sbjct: 313 YAKCGSLVDARNCFDKLNRNEKNLIAWNTMITAYASYGHGLQAVSTFREMIQAGIQPDDI 372

Query: 313 TIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYS 357
           T  GL           L+ C HS  +  G+         +ST YS
Sbjct: 373 TFTGL-----------LSGCSHSGLVDVGL----KYFNHMSTTYS 402


>gi|225457315|ref|XP_002281558.1| PREDICTED: pentatricopeptide repeat-containing protein At2g02980
           [Vitis vinifera]
 gi|297733922|emb|CBI15169.3| unnamed protein product [Vitis vinifera]
          Length = 615

 Score =  442 bits (1137), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 217/517 (41%), Positives = 314/517 (60%), Gaps = 2/517 (0%)

Query: 268 FRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHL 327
           F   +  DL  CN+MI  YT + K   S+ ++ Q+  +    +SST   ++         
Sbjct: 101 FYGFIDSDL--CNSMIRCYTDSNKHLHSVFIYTQMWKNGIFPDSSTFPTVLKSVAQLCRQ 158

Query: 328 HLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGY 387
            L   IH   ++ G  SN  V TAL  +Y   + +  AR++FDE  ++++ SWNA+I GY
Sbjct: 159 ELGKAIHCCIIQMGFESNVYVSTALVNMYGTCSSVSDARQVFDEIPDRNIVSWNALITGY 218

Query: 388 TQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNI 447
             N +  + I +F+EMQ +   P  VT+  +L ACA LGA++ G+W+ + +       N+
Sbjct: 219 NHNRMFRKVIDVFREMQIAGAKPVEVTMVGVLLACAHLGALNQGRWIDDYIDHNRLRLNV 278

Query: 448 YVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHS 507
           +V TALIDMYAKCG + EA ++F  M  K+  TWN +ISGY ++G G  ALQ FS M+  
Sbjct: 279 FVGTALIDMYAKCGVVDEAEKIFKAMRVKNVYTWNVLISGYAMNGRGESALQAFSRMIME 338

Query: 508 GIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEK 567
             +P  VTFL VL AC H GLV EG   F SM  + G +P  EHY CMVD+LGRAG L++
Sbjct: 339 KFKPDEVTFLGVLCACCHQGLVNEGRTYFTSMKEEFGLRPRIEHYGCMVDLLGRAGFLDE 398

Query: 568 ALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSA 627
           A + I+ ++++P P +W  LLGAC IH +  L   A +KL EL+P N   +VLL+N+Y+ 
Sbjct: 399 AQQLIQAMSMQPDPIIWRELLGACRIHGNIQLGEFAIKKLLELEPNNGENYVLLANLYAR 458

Query: 628 ERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGK 687
           ++ + +   VR+++  R++ K PGC+ IE+    + F   + + P    +Y +L  +N K
Sbjct: 459 DQRWDKVGEVREMMDCRRVRKVPGCSSIEIDNVVYEFVVSNYIKPGFEEVYKLLADMNKK 518

Query: 688 MREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDC 747
           ++ AG+  +T  A +D+EEEEKE  +  HSEKLA+AFGL+ +  G  +RI+KNLR+C DC
Sbjct: 519 LKLAGYVADTGMASYDIEEEEKEHSLMYHSEKLALAFGLLKSPSGLTLRIVKNLRICQDC 578

Query: 748 HTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           H   K +SKV  R I VRD NRFHHF GG CSC DYW
Sbjct: 579 HGFFKIVSKVYRRDISVRDRNRFHHFVGGACSCKDYW 615



 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 127/466 (27%), Positives = 218/466 (46%), Gaps = 50/466 (10%)

Query: 15  LLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCY---ARALFFS--IPK 69
           L K     + + Q  +Q+I++    D   + KL     DF  + +   A AL F+     
Sbjct: 49  LTKSISNHAHMNQMLSQMIMNYIPIDHLNLMKLI----DFSVSSHGFAASALLFTQFYGF 104

Query: 70  PDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVL 129
            D  L N +IR ++++     S+  YT + KN  + PD+ T+  VL + +  C + +G  
Sbjct: 105 IDSDLCNSMIRCYTDSNKHLHSVFIYTQMWKN-GIFPDSSTFPTVLKSVAQLCRQELGKA 163

Query: 130 LHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCC 189
           +H   I  G+ S+++V  ALV++Y   S V  AR+VFD++P+++ V WN++I+G   N  
Sbjct: 164 IHCCIIQMGFESNVYVSTALVNMYGTCSSVSDARQVFDEIPDRNIVSWNALITGYNHNRM 223

Query: 190 FQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLT 249
           F+  I VF +M   G   ++ T V  VL A A +  L  G  I           +V+V T
Sbjct: 224 FRKVIDVFREMQIAGAKPVEVTMV-GVLLACAHLGALNQGRWIDDYIDHNRLRLNVFVGT 282

Query: 250 GLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERV 309
            L+  Y+KCG V+ AE +F+ +   ++ + N +ISGY  NG+ ES+L+ F +++    + 
Sbjct: 283 ALIDMYAKCGVVDEAEKIFKAMRVKNVYTWNVLISGYAMNGRGESALQAFSRMIMEKFKP 342

Query: 310 NSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLF 369
           +  T +G+           L  C H   +  G            T ++ + E    R   
Sbjct: 343 DEVTFLGV-----------LCACCHQGLVNEG-----------RTYFTSMKEEFGLR--- 377

Query: 370 DESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAIS 429
                  +  +  M+    + G  +EA  L Q M    + P+P+    +L AC   G I 
Sbjct: 378 -----PRIEHYGCMVDLLGRAGFLDEAQQLIQAMS---MQPDPIIWRELLGACRIHGNIQ 429

Query: 430 LGKW-VHELVKSRNFESNIYVSTALIDMYA---KCGNIVEARELFD 471
           LG++ + +L++        YV   L ++YA   +   + E RE+ D
Sbjct: 430 LGEFAIKKLLELEPNNGENYV--LLANLYARDQRWDKVGEVREMMD 473



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 90/323 (27%), Positives = 162/323 (50%), Gaps = 3/323 (0%)

Query: 173 DTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEI 232
           D+ L NSMI     +     S++++  M +NG  + DS++   VL +VA++    LG  I
Sbjct: 106 DSDLCNSMIRCYTDSNKHLHSVFIYTQMWKNG-IFPDSSTFPTVLKSVAQLCRQELGKAI 164

Query: 233 QCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKT 292
            C  +++GF  +VYV T LV+ Y  C  V  A  +F +I   +++S NA+I+GY  N   
Sbjct: 165 HCCIIQMGFESNVYVSTALVNMYGTCSSVSDARQVFDEIPDRNIVSWNALITGYNHNRMF 224

Query: 293 ESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTAL 352
              + +FR++  +  +    T+VG++      G L+    I  +   + +  N  V TAL
Sbjct: 225 RKVIDVFREMQIAGAKPVEVTMVGVLLACAHLGALNQGRWIDDYIDHNRLRLNVFVGTAL 284

Query: 353 STVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNP 412
             +Y++   ++ A K+F     K++ +WN +I+GY  NG  E A+  F  M   K  P+ 
Sbjct: 285 IDMYAKCGVVDEAEKIFKAMRVKNVYTWNVLISGYAMNGRGESALQAFSRMIMEKFKPDE 344

Query: 413 VTVSSILSACAQLGAISLGK-WVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFD 471
           VT   +L AC   G ++ G+ +   + +       I     ++D+  + G + EA++L  
Sbjct: 345 VTFLGVLCACCHQGLVNEGRTYFTSMKEEFGLRPRIEHYGCMVDLLGRAGFLDEAQQLIQ 404

Query: 472 LMSHKSE-VTWNTMISGYGLHGH 493
            MS + + + W  ++    +HG+
Sbjct: 405 AMSMQPDPIIWRELLGACRIHGN 427


>gi|225433487|ref|XP_002264838.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06140,
           mitochondrial [Vitis vinifera]
 gi|298205230|emb|CBI17289.3| unnamed protein product [Vitis vinifera]
          Length = 688

 Score =  442 bits (1137), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 242/656 (36%), Positives = 373/656 (56%), Gaps = 2/656 (0%)

Query: 130 LHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCC 189
           L+   +V+     L  G  +   Y +   +  A K F+ +  ++   WN++++   KN C
Sbjct: 34  LNAQILVNALHRSLLFGPMIFGAYIQLGSLHVASKAFNHITFENLHSWNTILASHSKNKC 93

Query: 190 FQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLT 249
           F D + +F  M++ G   +DS ++   + A   +   +       L +KL      YV  
Sbjct: 94  FYDVLQLFKRMLKEG-KLVDSFNLVFAVKACFGLSLFQGAKLFHSLAIKLRLEGDPYVAP 152

Query: 250 GLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERV 309
            L++ Y++ G +E A  +F ++   + +    MI G+    +      LF ++  S   +
Sbjct: 153 ALMNVYTELGSLEEAHKVFEEVPLKNSVIWGVMIKGHLNFSEEFGVFELFSRMRRSGFEL 212

Query: 310 NSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIV-SNSSVLTALSTVYSRLNEMEAARKL 368
           +   + GLI               H  C+K   + SN  + T+L  +Y +   ++ A KL
Sbjct: 213 DPFVVEGLIQACGNVYAGKEGKTFHGLCIKKNFIDSNFFLQTSLVDMYMKCGFLDFALKL 272

Query: 369 FDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAI 428
           F+E S + +  W+A+IAG+ +NG   E+IS+F++M A  V PN VT +SI+ AC+ LG++
Sbjct: 273 FEEISYRDVVVWSAIIAGFARNGRALESISMFRQMLADSVTPNSVTFASIVLACSSLGSL 332

Query: 429 SLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGY 488
             G+ VH  +     E ++   T+ IDMYAKCG IV A  +F  +  K+  +W+TMI+G+
Sbjct: 333 KQGRSVHGYMIRNGVELDVKNYTSFIDMYAKCGCIVTAYRVFCQIPEKNVFSWSTMINGF 392

Query: 489 GLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPL 548
           G+HG   EAL LF EM      P+ VTF+SVL ACSH+G + EG   F+SM  D+G  P+
Sbjct: 393 GMHGLCAEALNLFYEMRSVNQLPNSVTFVSVLSACSHSGRIEEGWSHFKSMSRDYGITPV 452

Query: 549 AEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLF 608
            EHYACMVD+LGRAG++++AL FI  +  EPG + WGALLGAC IH+   LA   ++KL 
Sbjct: 453 EEHYACMVDLLGRAGKIDEALSFINNMPTEPGASAWGALLGACRIHRRAELAEEVAKKLL 512

Query: 609 ELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGD 668
            L+ +  G +V+LSNIY+    +      R  + ++ + K  G T IE+    ++F+S D
Sbjct: 513 PLESDQSGVYVMLSNIYADVGMWEMVKKTRLKMCEKGIHKIVGFTSIEIEEKLYLFSSED 572

Query: 669 QLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIA 728
           +   ++T I ++   L  +MRE G+  +    LHDV++E K+ ++  HSEKLAI FGL+ 
Sbjct: 573 RFAYKNTQIESLWNSLKERMRELGYVPDLRFVLHDVDDEVKQEVLCGHSEKLAIVFGLLN 632

Query: 729 TEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           +  G  IRI KN+RVC DCHTA+KFIS +T R I++RD  RFHH + GVCSCGDYW
Sbjct: 633 SGEGMPIRITKNMRVCGDCHTASKFISLITRRKIIMRDVKRFHHVQDGVCSCGDYW 688



 Score =  176 bits (445), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 145/525 (27%), Positives = 241/525 (45%), Gaps = 15/525 (2%)

Query: 8   SRN---LFLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALF 64
           SRN     LSL +  KT +   Q +AQI+++     L     +        +   A   F
Sbjct: 11  SRNPTKTLLSLFRFTKTLASNHQLNAQILVNALHRSLLFGPMIFGAYIQLGSLHVASKAF 70

Query: 65  FSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDR 124
             I   +L  +N I+   S N+     +  +  + K   L  D+F   F + A       
Sbjct: 71  NHITFENLHSWNTILASHSKNKCFYDVLQLFKRMLKEGKLV-DSFNLVFAVKACFGLSLF 129

Query: 125 SIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGL 184
               L H  AI      D +V  AL+++Y +   ++ A KVF+++P K++V+W  MI G 
Sbjct: 130 QGAKLFHSLAIKLRLEGDPYVAPALMNVYTELGSLEEAHKVFEEVPLKNSVIWGVMIKGH 189

Query: 185 MKNCCFQDSIWVFG--DMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFH 242
           +    F +   VF     +R  G  LD   V  ++ A   V   + G     L +K  F 
Sbjct: 190 LN---FSEEFGVFELFSRMRRSGFELDPFVVEGLIQACGNVYAGKEGKTFHGLCIKKNFI 246

Query: 243 DHVYVL-TGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQ 301
           D  + L T LV  Y KCG ++ A  LF +I   D++  +A+I+G+  NG+   S+ +FRQ
Sbjct: 247 DSNFFLQTSLVDMYMKCGFLDFALKLFEEISYRDVVVWSAIIAGFARNGRALESISMFRQ 306

Query: 302 LLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNE 361
           +LA +   NS T   ++      G L     +H + +++G+  +    T+   +Y++   
Sbjct: 307 MLADSVTPNSVTFASIVLACSSLGSLKQGRSVHGYMIRNGVELDVKNYTSFIDMYAKCGC 366

Query: 362 MEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSA 421
           +  A ++F +  EK++ SW+ MI G+  +GL  EA++LF EM++    PN VT  S+LSA
Sbjct: 367 IVTAYRVFCQIPEKNVFSWSTMINGFGMHGLCAEALNLFYEMRSVNQLPNSVTFVSVLSA 426

Query: 422 CAQLGAISLGKWVHELVKSRNFESNIYVS--TALIDMYAKCGNIVEARELFDLM-SHKSE 478
           C+  G I  G W H    SR++           ++D+  + G I EA    + M +    
Sbjct: 427 CSHSGRIEEG-WSHFKSMSRDYGITPVEEHYACMVDLLGRAGKIDEALSFINNMPTEPGA 485

Query: 479 VTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGV-TFLSVLYA 522
             W  ++    +H     A ++  ++L      SGV   LS +YA
Sbjct: 486 SAWGALLGACRIHRRAELAEEVAKKLLPLESDQSGVYVMLSNIYA 530


>gi|302802241|ref|XP_002982876.1| hypothetical protein SELMODRAFT_117311 [Selaginella moellendorffii]
 gi|300149466|gb|EFJ16121.1| hypothetical protein SELMODRAFT_117311 [Selaginella moellendorffii]
          Length = 923

 Score =  442 bits (1137), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 264/739 (35%), Positives = 412/739 (55%), Gaps = 22/739 (2%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           A  +F  I   D  ++N +I     +E    ++  +  +R    +TP+  T    ++A +
Sbjct: 193 AWGVFDGILVRDAAVWNAMISLLVAHEQGDEALELFRQMRLG-GVTPNKGT---CVAALN 248

Query: 120 ACC---DRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVL 176
           ACC   D S  + +H  A      +D  V  ALV++Y KF  V  A ++F+++ E+D V 
Sbjct: 249 ACCHSRDFSEALRIHAFARELAGDADTVVQTALVNMYGKFGKVDDAEEIFERIQERDVVS 308

Query: 177 WNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLG 236
           WN+M++    N     +   F +M+  G      T VA +L A      L+ G  ++ L 
Sbjct: 309 WNAMLTANACNGFHDKAFKCFREMLLVGELPSRITYVA-ILNACFLAAHLKHGDFVKTLA 367

Query: 237 LKLGFHDH---VYVLTGLVSFYSKCGEVERA----ELLFRDIVRPDLISCNAMISGYTCN 289
           ++ G       V + T +++ YS+C   + A     LL +D  +P ++  N ++S Y  N
Sbjct: 368 VEGGCGIESVDVVMGTAIMNMYSRCKSPKSAFSSSLLLEQDRDQPSIMMWNTVLSLYVEN 427

Query: 290 GKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGH---LHLTNCIHSFCLKSGIVSNS 346
            + E +  +FR +L     +++   V L+ VF   G    L     IHS   +S +   +
Sbjct: 428 EQFEEAFTIFRLMLLGGVTIDT---VSLMTVFNACGSSASLEKGKWIHSLLTESELTRKT 484

Query: 347 SVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQAS 406
            V  AL T+Y+RL  +E AR++FD  + +++ SW AM+  ++Q GL  EA+ +F+ +   
Sbjct: 485 PVQNALVTMYARLGSLEDAREIFDAMTTRNVISWTAMVGVHSQLGLNREALRIFRSILLE 544

Query: 407 KVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEA 466
            VAPN VT +++L+AC  L +I   K V   +    F  N+ V+  L+    KCG++ E 
Sbjct: 545 GVAPNEVTFTAVLNACGNLASIPAAKLVQACLSETGFFGNVEVANGLLCTLGKCGSLEEV 604

Query: 467 RELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHA 526
              F +M+ K++V+WNT I+    HG+G+  ++LF  M   GI    VT + VL +CSHA
Sbjct: 605 ANFFQVMAVKNQVSWNTAIAANAQHGNGVRGVELFQTMQLEGIDTGSVTLIGVLSSCSHA 664

Query: 527 GLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAV-EPGPAVWG 585
           GLV +G   F +M  D+GF   AEHY+C++D+L RAG LE A EF+K L   +     W 
Sbjct: 665 GLVAQGYSYFLNMHVDYGFPAEAEHYSCVIDLLSRAGWLEHAEEFVKRLPFGDQSVFPWI 724

Query: 586 ALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRK 645
            LL  C +H D      A++++  L+P + G ++++ N+Y+    + +AA VR+ + +  
Sbjct: 725 TLLCGCKLHGDLERGGRATQRILGLNPGSTGPYLVMHNLYAGAGKWPEAAAVRKSMVELG 784

Query: 646 LAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVE 705
             K PG + IEV G  H F  GD  HP+S+ I+  LE+LN +M+ AGF  +    ++D++
Sbjct: 785 PKKEPGLSWIEVKGRIHEFRVGDTSHPRSSEIHRELERLNEEMKRAGFVCDIKAVVYDLQ 844

Query: 706 EEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVR 765
            +EKE ++  HSEKLAIAFGLI+T  G  +RI+KNLRVC DCH+ATKFIS + GR IVVR
Sbjct: 845 AKEKESLLCQHSEKLAIAFGLISTAAGEPLRIMKNLRVCSDCHSATKFISGLVGREIVVR 904

Query: 766 DANRFHHFKGGVCSCGDYW 784
           DA RFHHF+GG CSC D+W
Sbjct: 905 DAYRFHHFRGGACSCEDFW 923



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 135/509 (26%), Positives = 233/509 (45%), Gaps = 21/509 (4%)

Query: 105 TPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARK 164
           + D  T++ ++   +   D + G  +HG  + +G     F+GA L+ +Y K    + AR 
Sbjct: 37  SADASTFAALIHKCARLHDLAQGRRIHGLILRNGIEVGDFLGARLLAMYCKCGSPEEARA 96

Query: 165 VFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVA--- 221
           VF  + +K  V W S+I    ++   +++  +F +M   G    D T V AVL A     
Sbjct: 97  VFQGIQDKSVVAWTSLIGVNARSGHPKEAFHLFREMQLQGVMPNDVTYV-AVLGACGHPW 155

Query: 222 EVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNA 281
           EV  +R  +E  C  L+L     V V T +++ Y KCG+++ A  +F  I+  D    NA
Sbjct: 156 EVDTIRARVE-ACGSLEL----DVIVATAVMNAYGKCGDLDSAWGVFDGILVRDAAVWNA 210

Query: 282 MISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSG 341
           MIS    + + + +L LFRQ+       N  T V  +              IH+F  +  
Sbjct: 211 MISLLVAHEQGDEALELFRQMRLGGVTPNKGTCVAALNACCHSRDFSEALRIHAFARELA 270

Query: 342 IVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQ 401
             +++ V TAL  +Y +  +++ A ++F+   E+ + SWNAM+     NG  ++A   F+
Sbjct: 271 GDADTVVQTALVNMYGKFGKVDDAEEIFERIQERDVVSWNAMLTANACNGFHDKAFKCFR 330

Query: 402 EMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSR--NFES-NIYVSTALIDMYA 458
           EM      P+ +T  +IL+AC     +  G +V  L        ES ++ + TA+++MY+
Sbjct: 331 EMLLVGELPSRITYVAILNACFLAAHLKHGDFVKTLAVEGGCGIESVDVVMGTAIMNMYS 390

Query: 459 KCGNIVEARELFDLMSHKSE----VTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGV 514
           +C +   A     L+    +    + WNT++S Y  +    EA  +F  ML  G+    V
Sbjct: 391 RCKSPKSAFSSSLLLEQDRDQPSIMMWNTVLSLYVENEQFEEAFTIFRLMLLGGVTIDTV 450

Query: 515 TFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKG 574
           + ++V  AC  +  + +G  I  S++ +            +V +  R G LE A E    
Sbjct: 451 SLMTVFNACGSSASLEKGKWI-HSLLTESELTRKTPVQNALVTMYARLGSLEDAREIFDA 509

Query: 575 LAVEPGPAVWGALLGACMIHKDTNLARVA 603
           +        W A++G   +H    L R A
Sbjct: 510 MTTR-NVISWTAMVG---VHSQLGLNREA 534


>gi|242050732|ref|XP_002463110.1| hypothetical protein SORBIDRAFT_02g037960 [Sorghum bicolor]
 gi|241926487|gb|EER99631.1| hypothetical protein SORBIDRAFT_02g037960 [Sorghum bicolor]
          Length = 802

 Score =  442 bits (1137), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 249/715 (34%), Positives = 378/715 (52%), Gaps = 83/715 (11%)

Query: 148 ALVDLYFKFSWVKSARKVFDKMPE--KDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGG 205
           +LV  Y     + +A   FD +P+  +DTVL N++IS   +      ++ VF  ++ +G 
Sbjct: 93  SLVAAYAAAGRLPAAVSFFDAVPQARRDTVLHNAVISAYARASHAAPAVAVFRSLLASGS 152

Query: 206 TWLDSTSVAAVLPAVAEVQEL--RLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKC----- 258
              D  S  A+L A   +  +  R   ++QC  LK G    + V   LV+ Y KC     
Sbjct: 153 LRPDDYSFTALLSAAGHLPNISVRHCAQLQCSVLKSGAGGVLSVSNALVALYMKCEALEA 212

Query: 259 -----------------------------GEVERAELLFRDI-VRPDLISCNAMISGYTC 288
                                        G+V  A  +F ++ V+ D++  NAMISGY  
Sbjct: 213 TRDARKVLDEMPDKDALTWTTMVVGYVRRGDVGAARSVFEEVDVKFDVV-WNAMISGYVH 271

Query: 289 NGKTESSLRLFRQLLASAERVNSSTIVGLIPV-----FYPFG---HLHLTNCIHSFCLKS 340
           +G    +  LFR+++     ++  T   ++       F+  G   H  +T    +F  ++
Sbjct: 272 SGMVVEAFELFRRMVLERVPLDEFTFTSVLSACANAGFFAHGKSVHGQITRLQPNFVPEA 331

Query: 341 GIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNA------------------ 382
            +  N+    AL T+YS+   +  AR++FD    K + SWN                   
Sbjct: 332 ALPVNN----ALVTLYSKCGNIAVARRIFDNMKSKDVVSWNTILSGYVESSCLDKAVEVF 387

Query: 383 -------------MIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAIS 429
                        M++GY   G +E+A+ LF  M+A  V P   T +  +SAC +LG++ 
Sbjct: 388 EEMPYKNELSWMVMVSGYVHGGFSEDALKLFNRMRAEDVKPCDYTYAGAISACGELGSLK 447

Query: 430 LGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYG 489
            GK +H  +    FE +     ALI MYA+CG + EA  +F +M +   V+WN MIS  G
Sbjct: 448 HGKQLHGHLVQLGFEGSNSAGNALITMYARCGAVKEANLMFLVMPNIDSVSWNAMISALG 507

Query: 490 LHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLA 549
            HGHG EAL+LF  M+  GI P  ++FL+VL AC+H+GLV EG + F+SM  D G  P  
Sbjct: 508 QHGHGREALELFDRMVAEGIYPDRISFLTVLTACNHSGLVDEGFQYFESMKRDFGIIPGE 567

Query: 550 EHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFE 609
           +HY  ++D+LGRAG++ +A + IK +  EP P++W A+L  C    D  L   A+++LF+
Sbjct: 568 DHYTRLIDLLGRAGRIGEARDLIKTMPFEPTPSIWEAILSGCRTSGDMELGAHAADQLFK 627

Query: 610 LDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQ 669
           + P++ G ++LLSN YSA   ++ AA VR++++ R + K PGC+ IE G   HVF  GD 
Sbjct: 628 MTPQHDGTYILLSNTYSAAGRWVDAARVRKLMRDRGVKKEPGCSWIEAGNKVHVFVVGDT 687

Query: 670 LHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIAT 729
            HP++  +Y  LE +  +MR+ G+  +T   LHD+E  +KE ++  HSE+LA+ FGL+  
Sbjct: 688 KHPEAHKVYKFLEMVGARMRKLGYVPDTKVVLHDMEPHQKEHILFAHSERLAVGFGLLKL 747

Query: 730 EPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
            PG  + ++KNLR+C DCH    F+SK  GR IVVRD  RFHHFK G CSCG+YW
Sbjct: 748 PPGATVTVLKNLRICDDCHAVMMFMSKAVGREIVVRDVRRFHHFKDGECSCGNYW 802



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 134/506 (26%), Positives = 214/506 (42%), Gaps = 82/506 (16%)

Query: 60  ARALFFSIP--KPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSA 117
           A + F ++P  + D  L N +I  ++       ++  +  L  + +L PD+++++ +LSA
Sbjct: 107 AVSFFDAVPQARRDTVLHNAVISAYARASHAAPAVAVFRSLLASGSLRPDDYSFTALLSA 166

Query: 118 ASACCDRSIG--VLLHGHAIVSGYGSDLFVGAALVDLYFK---FSWVKSARKVFDKMPEK 172
           A    + S+     L    + SG G  L V  ALV LY K       + ARKV D+MP+K
Sbjct: 167 AGHLPNISVRHCAQLQCSVLKSGAGGVLSVSNALVALYMKCEALEATRDARKVLDEMPDK 226

Query: 173 DT-------------------------------VLWNSMISGLMKNCCFQDSIWVFGDMV 201
           D                                V+WN+MISG + +    ++  +F  MV
Sbjct: 227 DALTWTTMVVGYVRRGDVGAARSVFEEVDVKFDVVWNAMISGYVHSGMVVEAFELFRRMV 286

Query: 202 RNGGTWLDSTSVAAVLPAVAEVQELRLGMEI--QCLGLKLGF--HDHVYVLTGLVSFYSK 257
                 LD  +  +VL A A       G  +  Q   L+  F     + V   LV+ YSK
Sbjct: 287 LER-VPLDEFTFTSVLSACANAGFFAHGKSVHGQITRLQPNFVPEAALPVNNALVTLYSK 345

Query: 258 CGEVERAELLFRDIVRPDLISCNA-------------------------------MISGY 286
           CG +  A  +F ++   D++S N                                M+SGY
Sbjct: 346 CGNIAVARRIFDNMKSKDVVSWNTILSGYVESSCLDKAVEVFEEMPYKNELSWMVMVSGY 405

Query: 287 TCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNS 346
              G +E +L+LF ++ A   +    T  G I      G L     +H   ++ G   ++
Sbjct: 406 VHGGFSEDALKLFNRMRAEDVKPCDYTYAGAISACGELGSLKHGKQLHGHLVQLGFEGSN 465

Query: 347 SVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQAS 406
           S   AL T+Y+R   ++ A  +F         SWNAMI+   Q+G   EA+ LF  M A 
Sbjct: 466 SAGNALITMYARCGAVKEANLMFLVMPNIDSVSWNAMISALGQHGHGREALELFDRMVAE 525

Query: 407 KVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNF----ESNIYVSTALIDMYAKCGN 462
            + P+ ++  ++L+AC   G +  G    E +K R+F      + Y  T LID+  + G 
Sbjct: 526 GIYPDRISFLTVLTACNHSGLVDEGFQYFESMK-RDFGIIPGEDHY--TRLIDLLGRAGR 582

Query: 463 IVEARELFDLMS-HKSEVTWNTMISG 487
           I EAR+L   M    +   W  ++SG
Sbjct: 583 IGEARDLIKTMPFEPTPSIWEAILSG 608



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 107/394 (27%), Positives = 169/394 (42%), Gaps = 75/394 (19%)

Query: 249 TGLVSFYSKCGEVERAELLFRDI--VRPDLISCNAMISGYTCNGKTESSLRLFRQLLASA 306
           T LV+ Y+  G +  A   F  +   R D +  NA+IS Y        ++ +FR LLAS 
Sbjct: 92  TSLVAAYAAAGRLPAAVSFFDAVPQARRDTVLHNAVISAYARASHAAPAVAVFRSLLASG 151

Query: 307 E-RVNSSTIVGLIPVFYPFGHLHLTNCIHSFC--LKSGIVSNSSVLTALSTVYSRLNEME 363
             R +  +   L+       ++ + +C    C  LKSG     SV  AL  +Y +   +E
Sbjct: 152 SLRPDDYSFTALLSAAGHLPNISVRHCAQLQCSVLKSGAGGVLSVSNALVALYMKCEALE 211

Query: 364 A---ARKLFDESSEKSLASWNAMI-------------------------------AGYTQ 389
           A   ARK+ DE  +K   +W  M+                               +GY  
Sbjct: 212 ATRDARKVLDEMPDKDALTWTTMVVGYVRRGDVGAARSVFEEVDVKFDVVWNAMISGYVH 271

Query: 390 NGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVK--SRNF--ES 445
           +G+  EA  LF+ M   +V  +  T +S+LSACA  G  + GK VH  +     NF  E+
Sbjct: 272 SGMVVEAFELFRRMVLERVPLDEFTFTSVLSACANAGFFAHGKSVHGQITRLQPNFVPEA 331

Query: 446 NIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNT---------------------- 483
            + V+ AL+ +Y+KCGNI  AR +FD M  K  V+WNT                      
Sbjct: 332 ALPVNNALVTLYSKCGNIAVARRIFDNMKSKDVVSWNTILSGYVESSCLDKAVEVFEEMP 391

Query: 484 ---------MISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDE 534
                    M+SGY   G   +AL+LF+ M    ++P   T+   + AC   G ++ G +
Sbjct: 392 YKNELSWMVMVSGYVHGGFSEDALKLFNRMRAEDVKPCDYTYAGAISACGELGSLKHGKQ 451

Query: 535 IFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKA 568
           +   ++   GF+        ++ +  R G +++A
Sbjct: 452 LHGHLVQ-LGFEGSNSAGNALITMYARCGAVKEA 484



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 60/246 (24%), Positives = 110/246 (44%), Gaps = 12/246 (4%)

Query: 55  KATCYARAL--FFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYS 112
           +++C  +A+  F  +P  +   + V++ G+ +    + ++  +  +R    + P ++TY+
Sbjct: 376 ESSCLDKAVEVFEEMPYKNELSWMVMVSGYVHGGFSEDALKLFNRMRAED-VKPCDYTYA 434

Query: 113 FVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEK 172
             +SA         G  LHGH +  G+      G AL+ +Y +   VK A  +F  MP  
Sbjct: 435 GAISACGELGSLKHGKQLHGHLVQLGFEGSNSAGNALITMYARCGAVKEANLMFLVMPNI 494

Query: 173 DTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGME- 231
           D+V WN+MIS L ++   ++++ +F  MV   G + D  S   VL A      +  G + 
Sbjct: 495 DSVSWNAMISALGQHGHGREALELFDRMVAE-GIYPDRISFLTVLTACNHSGLVDEGFQY 553

Query: 232 IQCLGLKLGF---HDHVYVLTGLVSFYSKCGEVERAELLFRDI-VRPDLISCNAMISGYT 287
            + +    G     DH    T L+    + G +  A  L + +   P      A++SG  
Sbjct: 554 FESMKRDFGIIPGEDH---YTRLIDLLGRAGRIGEARDLIKTMPFEPTPSIWEAILSGCR 610

Query: 288 CNGKTE 293
            +G  E
Sbjct: 611 TSGDME 616


>gi|302767396|ref|XP_002967118.1| hypothetical protein SELMODRAFT_87370 [Selaginella moellendorffii]
 gi|300165109|gb|EFJ31717.1| hypothetical protein SELMODRAFT_87370 [Selaginella moellendorffii]
          Length = 903

 Score =  442 bits (1136), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 271/797 (34%), Positives = 412/797 (51%), Gaps = 48/797 (6%)

Query: 12  FLSLLKGAKTQSQLTQ---THAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARA-LFFSI 67
           FL++LK       L+Q    HA I+  G +        L H        C A A L F  
Sbjct: 131 FLAVLKACARLGDLSQGRSIHAWIVESGLEGKSVLANLLLHIYG--SCGCVASAMLLFER 188

Query: 68  PKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIG 127
            + DL  +N  I   + +     ++  +  ++    + P   T    LS    C      
Sbjct: 189 MERDLVSWNAAIAANAQSGDLDMALELFQRMQLE-GVRPARITLVITLSV---CAKIRQA 244

Query: 128 VLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKN 187
             +H     SG    L V  AL   Y +   +  A++VFD+  E+D V WN+M+    ++
Sbjct: 245 RAIHSIVRESGLEQTLVVSTALASAYARLGHLDQAKEVFDRAAERDVVSWNAMLGAYAQH 304

Query: 188 CCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYV 247
               ++  +F  M+  G       S   ++ A      LR G  I    L+ G    + +
Sbjct: 305 GHMSEAALLFARMLHEG----IPPSKVTLVNASTGCSSLRFGRMIHACALEKGLDRDIVL 360

Query: 248 LTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAE 307
              L+  Y++CG  E A  LF  I   + +S N MI+G +  G+ + +L LF+++     
Sbjct: 361 GNALLDMYTRCGSPEEARHLFEGIP-GNAVSWNTMIAGSSQKGQMKRALELFQRM----- 414

Query: 308 RVNSSTIVGLIPVFYPFGHLHLTNCI----------------HSFCLKSGIVSNSSVLTA 351
                 + G+ PV   +  L+L   +                HS  +  G  S  ++ TA
Sbjct: 415 -----QLEGMAPVRATY--LNLLEAVASNPEEARAMAEGRKLHSRIVSCGYASEPAIGTA 467

Query: 352 LSTVYSRLNEMEAARKLFDESS---EKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKV 408
           +  +Y+    ++ A   F   +      + SWNA+I+  +Q+G  + A+  F+ M    V
Sbjct: 468 VVKMYASCGAIDEAAASFQRGAMEDRHDVVSWNAIISSLSQHGHGKRALGFFRRMDLHGV 527

Query: 409 APNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARE 468
           APN +T  ++L ACA   A++ G  VH+ ++    ESN++V+TAL  MY +CG++  ARE
Sbjct: 528 APNQITCVAVLDACAGAAALTEGVIVHDHLRHSGMESNVFVATALASMYGRCGSLESARE 587

Query: 469 LFDLMS-HKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAG 527
           +F+ ++  +  V +N MI+ Y  +G   EAL+LF  M   G RP   +F+SVL ACSH G
Sbjct: 588 IFEKVAVERDVVIFNAMIAAYSQNGLAGEALKLFWRMQQEGSRPDEQSFVSVLSACSHGG 647

Query: 528 LVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGAL 587
           L  EG EIF+SM   +G  P  +HYAC VD+LGRAG L  A E I+ + V+P   VW  L
Sbjct: 648 LADEGWEIFRSMRQSYGIAPSEDHYACAVDVLGRAGWLADAEELIRCMDVKPTVLVWKTL 707

Query: 588 LGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLA 647
           LGAC  ++D +  R+A+  + ELDP +   +V+LSNI +    + +AA VR  ++ R L 
Sbjct: 708 LGACRKYRDVDRGRLANSMVRELDPGDESAYVVLSNILAGAGKWDEAAEVRTEMESRGLR 767

Query: 648 KAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEE 707
           K  G + IE+    H F +GD+ HP+S  IY  LE+L+ ++RE G+  +T   L  V+E 
Sbjct: 768 KQAGKSWIEIKSRVHEFVAGDRSHPRSEEIYRELERLHAEIREIGYVPDTRLVLRKVDEA 827

Query: 708 EKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDA 767
           EKE ++  HSE+LAIA G++++   T +R++KNLRVC DCH ATKFISK+  + IVVRD 
Sbjct: 828 EKERLLCQHSERLAIALGVMSSSTDT-VRVMKNLRVCEDCHNATKFISKIVNKEIVVRDT 886

Query: 768 NRFHHFKGGVCSCGDYW 784
           +RFHHF  G CSCGDYW
Sbjct: 887 HRFHHFVDGSCSCGDYW 903



 Score =  190 bits (483), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 120/390 (30%), Positives = 199/390 (51%), Gaps = 9/390 (2%)

Query: 133 HAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQD 192
           HA +   G +  +G  L+ LY K   +    +VF ++  +D   W ++I+   ++   + 
Sbjct: 52  HARIVSLGLEEELGNHLLRLYLKCESLGDVEEVFSRLEVRDEASWTTIITAYTEHGQAKR 111

Query: 193 SIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLV 252
           +IW+F  M +  G   D+ +  AVL A A + +L  G  I    ++ G      +   L+
Sbjct: 112 AIWMFHRM-QQEGVRCDAVTFLAVLKACARLGDLSQGRSIHAWIVESGLEGKSVLANLLL 170

Query: 253 SFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSS 312
             Y  CG V  A LLF  + R DL+S NA I+    +G  + +L LF+++     R    
Sbjct: 171 HIYGSCGCVASAMLLFERMER-DLVSWNAAIAANAQSGDLDMALELFQRMQLEGVRPARI 229

Query: 313 TIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDES 372
           T+V  + V      +     IHS   +SG+     V TAL++ Y+RL  ++ A+++FD +
Sbjct: 230 TLVITLSV---CAKIRQARAIHSIVRESGLEQTLVVSTALASAYARLGHLDQAKEVFDRA 286

Query: 373 SEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGK 432
           +E+ + SWNAM+  Y Q+G   EA  LF  M    + P+ VT+ +  + C+ L     G+
Sbjct: 287 AERDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGIPPSKVTLVNASTGCSSL---RFGR 343

Query: 433 WVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHG 492
            +H     +  + +I +  AL+DMY +CG+  EAR LF+ +   + V+WNTMI+G    G
Sbjct: 344 MIHACALEKGLDRDIVLGNALLDMYTRCGSPEEARHLFEGIPGNA-VSWNTMIAGSSQKG 402

Query: 493 HGLEALQLFSEMLHSGIRPSGVTFLSVLYA 522
               AL+LF  M   G+ P   T+L++L A
Sbjct: 403 QMKRALELFQRMQLEGMAPVRATYLNLLEA 432



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 113/370 (30%), Positives = 178/370 (48%), Gaps = 26/370 (7%)

Query: 224 QELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMI 283
           Q  R+   I  LGL+    +H      L+  Y KC  +   E +F  +   D  S   +I
Sbjct: 47  QGRRIHARIVSLGLEEELGNH------LLRLYLKCESLGDVEEVFSRLEVRDEASWTTII 100

Query: 284 SGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIV 343
           + YT +G+ + ++ +F ++     R ++ T + ++      G L     IH++ ++SG+ 
Sbjct: 101 TAYTEHGQAKRAIWMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRSIHAWIVESGLE 160

Query: 344 SNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEM 403
             S +   L  +Y     + +A  LF E  E+ L SWNA IA   Q+G  + A+ LFQ M
Sbjct: 161 GKSVLANLLLHIYGSCGCVASAMLLF-ERMERDLVSWNAAIAANAQSGDLDMALELFQRM 219

Query: 404 QASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNI 463
           Q   V P  +T+   LS CA+   I   + +H +V+    E  + VSTAL   YA+ G++
Sbjct: 220 QLEGVRPARITLVITLSVCAK---IRQARAIHSIVRESGLEQTLVVSTALASAYARLGHL 276

Query: 464 VEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYAC 523
            +A+E+FD  + +  V+WN M+  Y  HGH  EA  LF+ MLH GI PS VT ++    C
Sbjct: 277 DQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGIPPSKVTLVNASTGC 336

Query: 524 SHAGLVREGDEIFQSMIH----DHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEP 579
           S           F  MIH    + G          ++D+  R G  E+A    +G+   P
Sbjct: 337 SSLR--------FGRMIHACALEKGLDRDIVLGNALLDMYTRCGSPEEARHLFEGI---P 385

Query: 580 GPAV-WGALL 588
           G AV W  ++
Sbjct: 386 GNAVSWNTMI 395



 Score =  105 bits (263), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 69/243 (28%), Positives = 113/243 (46%), Gaps = 6/243 (2%)

Query: 352 LSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPN 411
           L  +Y +   +    ++F     +  ASW  +I  YT++G  + AI +F  MQ   V  +
Sbjct: 68  LLRLYLKCESLGDVEEVFSRLEVRDEASWTTIITAYTEHGQAKRAIWMFHRMQQEGVRCD 127

Query: 412 PVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFD 471
            VT  ++L ACA+LG +S G+ +H  +     E    ++  L+ +Y  CG +  A  LF+
Sbjct: 128 AVTFLAVLKACARLGDLSQGRSIHAWIVESGLEGKSVLANLLLHIYGSCGCVASAMLLFE 187

Query: 472 LMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVRE 531
            M  +  V+WN  I+     G    AL+LF  M   G+RP+ +T +  L  C+    +R+
Sbjct: 188 RM-ERDLVSWNAAIAANAQSGDLDMALELFQRMQLEGVRPARITLVITLSVCAK---IRQ 243

Query: 532 GDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGAC 591
              I  S++ + G +        +     R G L++A E     A E     W A+LGA 
Sbjct: 244 ARAI-HSIVRESGLEQTLVVSTALASAYARLGHLDQAKEVFD-RAAERDVVSWNAMLGAY 301

Query: 592 MIH 594
             H
Sbjct: 302 AQH 304


>gi|242080213|ref|XP_002444875.1| hypothetical protein SORBIDRAFT_07g000750 [Sorghum bicolor]
 gi|241941225|gb|EES14370.1| hypothetical protein SORBIDRAFT_07g000750 [Sorghum bicolor]
          Length = 583

 Score =  442 bits (1136), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 230/513 (44%), Positives = 325/513 (63%), Gaps = 2/513 (0%)

Query: 274 PDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCI 333
           PD     ++       G   ++L  +R+LLA+A   +S     +         L     +
Sbjct: 71  PDSFLFCSLTRAAARRGLPAAALAFYRRLLAAALPFSSFAFTSVAKACADLSALRAGMGV 130

Query: 334 HSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLT 393
           H+  +  G  S+  V TAL  +YS+  +++ ARKLFD   ++S+ +WNAMI+GY QNGL 
Sbjct: 131 HAHAVLLGFGSDRFVQTALVVLYSKCGKLDVARKLFDAIRDRSVVAWNAMISGYEQNGLA 190

Query: 394 EEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTAL 453
             AI +++EM+ +  AP+  T  + LSACAQ GA+ LG  V  L+ S   E N+ +  AL
Sbjct: 191 GRAIEVYREMRVAGEAPDSATFVATLSACAQAGALDLGHEVERLIVSERMEMNVVLGAAL 250

Query: 454 IDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSG 513
           ++MYA+CG + +ARE FD++  ++ VTW +MI+GYG+HGHG EA++LF  M   G  P+ 
Sbjct: 251 VNMYARCGLVNKAREWFDMLQERNVVTWTSMIAGYGMHGHGGEAVKLFDLMRQQGPPPND 310

Query: 514 VTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFI- 572
           VTF++VL AC+HAGLV +G + F SM   +G  P AEHY  MVD+ GRAG L+ A++FI 
Sbjct: 311 VTFVAVLSACAHAGLVSDGRDAFASMKSVYGLVPRAEHYCSMVDMYGRAGLLDDAMQFIH 370

Query: 573 KGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYL 632
             +  EPGP VW A+LGAC +HK+ +L    +E+L  L+PEN  + VLLSNIY+      
Sbjct: 371 DSIPGEPGPEVWTAMLGACKMHKNFSLGVEVAERLIALEPENPSHRVLLSNIYALSGKMN 430

Query: 633 QAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAG 692
               VR  + KR+L K  G +LIE+GG  HVF  G++ HP++  IY  LEKL  ++ +AG
Sbjct: 431 HVEKVRNTMIKRRLKKPIGYSLIEIGGVAHVFRMGEKSHPKTPEIYQYLEKLIHRITDAG 490

Query: 693 FQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGT-EIRIIKNLRVCLDCHTAT 751
           +  ET + LH++EEEE+E  ++ H EKLA+AFGL+ T   T  IRIIKNLR+C DCH A 
Sbjct: 491 YMPETDSVLHELEEEEREFALRYHGEKLAVAFGLMMTSGCTAPIRIIKNLRICGDCHLAI 550

Query: 752 KFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           K++S V  R I+VRD +RFHHFK G CSC +YW
Sbjct: 551 KYMSAVENREIIVRDMHRFHHFKAGKCSCQEYW 583



 Score =  162 bits (409), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 137/478 (28%), Positives = 220/478 (46%), Gaps = 54/478 (11%)

Query: 4   KTPQSRNLFLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARAL 63
           ++P+  +L   LL GA+    L Q HA++++ G  + L   TKLA       A  YA  L
Sbjct: 9   RSPEYNSL---LLAGARL-GPLKQAHARLVVSGHAHSLPLTTKLATLAVAAGAASYAGLL 64

Query: 64  FFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCD 123
             S P PD FLF  + R  +   +P +++ FY  L    AL   +F ++   S A AC D
Sbjct: 65  AASHPSPDSFLFCSLTRAAARRGLPAAALAFYRRLLA-AALPFSSFAFT---SVAKACAD 120

Query: 124 RSI---GVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSM 180
            S    G+ +H HA++ G+GSD FV  ALV LY K   +  ARK+FD + ++  V WN+M
Sbjct: 121 LSALRAGMGVHAHAVLLGFGSDRFVQTALVVLYSKCGKLDVARKLFDAIRDRSVVAWNAM 180

Query: 181 ISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLG 240
           ISG  +N     +I V+ +M R  G   DS +  A L A A+   L LG E++ L +   
Sbjct: 181 ISGYEQNGLAGRAIEVYREM-RVAGEAPDSATFVATLSACAQAGALDLGHEVERLIVSER 239

Query: 241 FHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFR 300
              +V +   LV+ Y++CG V +A   F  +   ++++  +MI+GY  +G    +++LF 
Sbjct: 240 MEMNVVLGAALVNMYARCGLVNKAREWFDMLQERNVVTWTSMIAGYGMHGHGGEAVKLFD 299

Query: 301 QLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNS-SVLTALSTVYSRL 359
            +       N  T V ++                S C  +G+VS+      ++ +VY  +
Sbjct: 300 LMRQQGPPPNDVTFVAVL----------------SACAHAGLVSDGRDAFASMKSVYGLV 343

Query: 360 NEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSIL 419
              E                + +M+  Y + GL ++A+    +    +  P P   +++L
Sbjct: 344 PRAE---------------HYCSMVDMYGRAGLLDDAMQFIHDSIPGE--PGPEVWTAML 386

Query: 420 SACAQLGAISLGKWVHELV--------KSRNFESNIYVSTALIDMYAKCGNIVEAREL 469
            AC      SLG  V E +          R   SNIY  +  ++   K  N +  R L
Sbjct: 387 GACKMHKNFSLGVEVAERLIALEPENPSHRVLLSNIYALSGKMNHVEKVRNTMIKRRL 444



 Score =  139 bits (350), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 99/347 (28%), Positives = 165/347 (47%), Gaps = 10/347 (2%)

Query: 208 LDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELL 267
             S +  +V  A A++  LR GM +    + LGF    +V T LV  YSKCG+++ A  L
Sbjct: 106 FSSFAFTSVAKACADLSALRAGMGVHAHAVLLGFGSDRFVQTALVVLYSKCGKLDVARKL 165

Query: 268 FRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHL 327
           F  I    +++ NAMISGY  NG    ++ ++R++  + E  +S+T V  +      G L
Sbjct: 166 FDAIRDRSVVAWNAMISGYEQNGLAGRAIEVYREMRVAGEAPDSATFVATLSACAQAGAL 225

Query: 328 HLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGY 387
            L + +    +   +  N  +  AL  +Y+R   +  AR+ FD   E+++ +W +MIAGY
Sbjct: 226 DLGHEVERLIVSERMEMNVVLGAALVNMYARCGLVNKAREWFDMLQERNVVTWTSMIAGY 285

Query: 388 TQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKS-RNFESN 446
             +G   EA+ LF  M+     PN VT  ++LSACA  G +S G+     +KS       
Sbjct: 286 GMHGHGGEAVKLFDLMRQQGPPPNDVTFVAVLSACAHAGLVSDGRDAFASMKSVYGLVPR 345

Query: 447 IYVSTALIDMYAKCGNIVEARELF--DLMSHKSEVTWNTMISGYGLHGH---GLEALQLF 501
                +++DMY + G + +A +     +        W  M+    +H +   G+E  +  
Sbjct: 346 AEHYCSMVDMYGRAGLLDDAMQFIHDSIPGEPGPEVWTAMLGACKMHKNFSLGVEVAERL 405

Query: 502 SEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPL 548
             +      PS    LS +YA S  G +   +++  +MI     KP+
Sbjct: 406 IAL--EPENPSHRVLLSNIYALS--GKMNHVEKVRNTMIKRRLKKPI 448


>gi|297740904|emb|CBI31086.3| unnamed protein product [Vitis vinifera]
          Length = 766

 Score =  442 bits (1136), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 248/682 (36%), Positives = 380/682 (55%), Gaps = 4/682 (0%)

Query: 23  SQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGF 82
           SQ  Q HAQ++++G   +    TKL        A   A+ +F+ +       +N +IRGF
Sbjct: 63  SQGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFYQLRLWCSEPWNWMIRGF 122

Query: 83  SNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSD 142
           +       ++ FY  +     L PD +T+ +V+ A       ++G ++H      G+  D
Sbjct: 123 TMMGQFDFALLFYFKMLGCGTL-PDKYTFPYVIKACGGLNSVALGRVVHDKIQFMGFELD 181

Query: 143 LFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVR 202
           +FVG++L+  Y +   +  AR +FD+MP KD VLWN M++G +KN  + ++  VF +M R
Sbjct: 182 VFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGDWDNATGVFMEM-R 240

Query: 203 NGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLT--GLVSFYSKCGE 260
              T  +S + A VL   A    +  G ++  L +  G      V     L+  Y KC +
Sbjct: 241 RTETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANTFALIDIYFKCRD 300

Query: 261 VERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPV 320
           VE A  +F      D++ C AMISGY  NG   ++L +FR LL    R NS T+  ++P 
Sbjct: 301 VEMARKIFDQRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQERMRANSVTLASVLPA 360

Query: 321 FYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASW 380
                 L L   +H   LK+G   +  V +A+  +Y++   ++ A + F   S+K    W
Sbjct: 361 CAGLAALTLGKELHGHILKNGHGGSCYVGSAIMDMYAKCGRLDLAHQTFIGISDKDAVCW 420

Query: 381 NAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKS 440
           N+MI   +QNG  EEAI LF++M  +    + V++S+ LSACA L A+  GK +H  +  
Sbjct: 421 NSMITSCSQNGKPEEAIDLFRQMGMAGTKYDCVSISAALSACANLPALHYGKEIHAFMMR 480

Query: 441 RNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQL 500
             F S+++  +ALIDMY+KCGN+  A  +FD M  K+EV+WN++I+ YG HG   ++L L
Sbjct: 481 GAFRSDLFAESALIDMYSKCGNLDLACRVFDTMEEKNEVSWNSIIAAYGNHGRLKDSLNL 540

Query: 501 FSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILG 560
           F  ML  GI+P  VTFL+++ AC HAG V EG   F+ M  + G     EHYACMVD+ G
Sbjct: 541 FHGMLGDGIQPDHVTFLAIISACGHAGQVDEGIHYFRCMTEELGIMARMEHYACMVDLFG 600

Query: 561 RAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVL 620
           RAG+L +A   I  +   P   VWG LLGAC +H +  LA VAS  LF+LDP+N GY+VL
Sbjct: 601 RAGRLNEAFGMINSMPFSPDAGVWGTLLGACRLHGNVELAEVASRNLFDLDPQNSGYYVL 660

Query: 621 LSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAM 680
           LSN+++    +     +R ++K+R + K PGC+ I+V  T H+F + D+ HPQS+ IY +
Sbjct: 661 LSNVHANAGQWESVLKIRSLMKERGVQKVPGCSWIDVNNTTHMFVAADRSHPQSSQIYLL 720

Query: 681 LEKLNGKMREAGFQTETVTALH 702
           L+ L  ++R+ G+  +    +H
Sbjct: 721 LKNLFLELRKEGYVPQLYLPMH 742



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 55/217 (25%), Positives = 88/217 (40%), Gaps = 7/217 (3%)

Query: 408 VAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEAR 467
           +AP  V   SIL  C     +S G+  H  +       N  + T L+ MY  CG  ++A+
Sbjct: 45  LAPQLV---SILQTCTDPSGLSQGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAK 101

Query: 468 ELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAG 527
            +F  +       WN MI G+ + G    AL  + +ML  G  P   TF  V+ AC    
Sbjct: 102 NIFYQLRLWCSEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLN 161

Query: 528 LVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGAL 587
            V  G  +    I   GF+      + ++      G +  A      +  + G  +W  +
Sbjct: 162 SVALG-RVVHDKIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDG-VLWNVM 219

Query: 588 LGACMIHKD-TNLARVASE-KLFELDPENVGYHVLLS 622
           L   + + D  N   V  E +  E +P +V +  +LS
Sbjct: 220 LNGYVKNGDWDNATGVFMEMRRTETNPNSVTFACVLS 256


>gi|242035229|ref|XP_002465009.1| hypothetical protein SORBIDRAFT_01g030410 [Sorghum bicolor]
 gi|241918863|gb|EER92007.1| hypothetical protein SORBIDRAFT_01g030410 [Sorghum bicolor]
          Length = 684

 Score =  441 bits (1135), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 237/657 (36%), Positives = 372/657 (56%), Gaps = 8/657 (1%)

Query: 130 LHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVL--WNSMISGLMKN 187
           LH   +VS    +LF   +L   Y +   + +A       P   + +  WN++++   + 
Sbjct: 34  LHALLVVSS-SQNLF--PSLAAAYARVGALDAAESTLAASPSSRSCIPAWNALLAARSRA 90

Query: 188 CCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYV 247
                ++ VF  +  +     DST+    L A A + +L     ++      G+   V+V
Sbjct: 91  GSPGAALRVFRALPSSARP--DSTTFTLALTACARLGDLDAAEAVRVRAFAAGYGRDVFV 148

Query: 248 LTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAE 307
            + L+  YS+CG +  A  +F  + R D ++ + M++G+   G+   +L ++ ++     
Sbjct: 149 CSALLHVYSRCGAMGDAIRVFDGMPRKDHVAWSTMVAGFVSAGRPVEALGMYSRMREHGV 208

Query: 308 RVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARK 367
             +   +VG+I      G+  +   +H   L+ G+  +  + T+L  +Y++    + AR+
Sbjct: 209 AEDEVVMVGVIQACTLTGNTRMGASVHGRFLRHGMRMDVVIATSLVDMYAKNGHFDVARQ 268

Query: 368 LFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGA 427
           +F     ++  SWNA+I+G+ QNG  +EA+ LF+EM  S + P+   + S L ACA +G 
Sbjct: 269 VFRMMPYRNAVSWNALISGFAQNGHADEALDLFREMSTSGLQPDSGALVSALLACADVGF 328

Query: 428 ISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISG 487
           + LGK +H  +  R  E    + TA++DMY+KCG++  AR+LF+ +S +  V WN MI+ 
Sbjct: 329 LKLGKSIHGFIL-RRLEFQCILGTAVLDMYSKCGSLESARKLFNKLSSRDLVLWNAMIAC 387

Query: 488 YGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKP 547
            G HG G +AL LF E+  +GI+P   TF S+L A SH+GLV EG   F  MI + G +P
Sbjct: 388 CGTHGCGHDALALFQELNETGIKPDHATFASLLSALSHSGLVEEGKFWFDRMITEFGIEP 447

Query: 548 LAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKL 607
             +H  C+VD+L R+G +E+A E +  +  EP   +W ALL  C+ +K   L    ++K+
Sbjct: 448 TEKHCVCVVDLLARSGLVEEANEMLASMHTEPTIPIWVALLSGCLNNKKLELGETIAKKI 507

Query: 608 FELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSG 667
            E  PE++G   L+SN+Y+A + + +   +R+++K     K PG +LIEV GT H F   
Sbjct: 508 LESQPEDIGVLALVSNLYAAAKKWDKVREIRKLMKDSGSKKVPGYSLIEVHGTRHAFVME 567

Query: 668 DQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLI 727
           DQ HPQ   I  M+ KL+ +MR+ G+   T    HD++E+ KE ++  HSE+LAIAFGL+
Sbjct: 568 DQSHPQHQEILKMISKLSFEMRKMGYVPRTEFVYHDLDEDVKEQLLSYHSERLAIAFGLL 627

Query: 728 ATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
            T PGT + IIKNLRVC DCH A K+ISK+  R IVVRDA RFHHFK G CSCGDYW
Sbjct: 628 NTSPGTRLVIIKNLRVCGDCHDAIKYISKIVDREIVVRDAKRFHHFKDGACSCGDYW 684



 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 130/471 (27%), Positives = 232/471 (49%), Gaps = 11/471 (2%)

Query: 21  TQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIP--KPDLFLFNVI 78
           T + LT+ HA +++   QN   ++     R+    A   A +   + P  +  +  +N +
Sbjct: 27  TVAALTRLHALLVVSSSQNLFPSLAAAYARVGALDA---AESTLAASPSSRSCIPAWNAL 83

Query: 79  IRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSG 138
           +   S    P +++  +  L   ++  PD+ T++  L+A +   D      +   A  +G
Sbjct: 84  LAARSRAGSPGAALRVFRAL--PSSARPDSTTFTLALTACARLGDLDAAEAVRVRAFAAG 141

Query: 139 YGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFG 198
           YG D+FV +AL+ +Y +   +  A +VFD MP KD V W++M++G +      +++ ++ 
Sbjct: 142 YGRDVFVCSALLHVYSRCGAMGDAIRVFDGMPRKDHVAWSTMVAGFVSAGRPVEALGMYS 201

Query: 199 DMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKC 258
            M R  G   D   +  V+ A       R+G  +    L+ G    V + T LV  Y+K 
Sbjct: 202 RM-REHGVAEDEVVMVGVIQACTLTGNTRMGASVHGRFLRHGMRMDVVIATSLVDMYAKN 260

Query: 259 GEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLI 318
           G  + A  +FR +   + +S NA+ISG+  NG  + +L LFR++  S  + +S  +V  +
Sbjct: 261 GHFDVARQVFRMMPYRNAVSWNALISGFAQNGHADEALDLFREMSTSGLQPDSGALVSAL 320

Query: 319 PVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLA 378
                 G L L   IH F L+  +     + TA+  +YS+   +E+ARKLF++ S + L 
Sbjct: 321 LACADVGFLKLGKSIHGFILRR-LEFQCILGTAVLDMYSKCGSLESARKLFNKLSSRDLV 379

Query: 379 SWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGK-WVHEL 437
            WNAMIA    +G   +A++LFQE+  + + P+  T +S+LSA +  G +  GK W   +
Sbjct: 380 LWNAMIACCGTHGCGHDALALFQELNETGIKPDHATFASLLSALSHSGLVEEGKFWFDRM 439

Query: 438 VKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVT-WNTMISG 487
           +     E        ++D+ A+ G + EA E+   M  +  +  W  ++SG
Sbjct: 440 ITEFGIEPTEKHCVCVVDLLARSGLVEEANEMLASMHTEPTIPIWVALLSG 490


>gi|357134267|ref|XP_003568739.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like [Brachypodium distachyon]
          Length = 818

 Score =  441 bits (1135), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 246/689 (35%), Positives = 403/689 (58%), Gaps = 21/689 (3%)

Query: 106 PDNFTYSFVLSAASACCDRSI-----GVLLHGHAIVSGY-GSDLFVGAALVDLYFKFSWV 159
           P+ FT   + +AA AC  + +     GV+L G  + +G+ G+D+ VG AL+D++ +   +
Sbjct: 141 PNAFT---LCAAARACFPQELFRLAGGVVL-GFVLKTGFWGTDVSVGCALIDMFARNGDL 196

Query: 160 KSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPA 219
            +A++VFD + E+ +V+W  +I+  ++  C    + +F  M+ +G    D  S+++++ A
Sbjct: 197 VAAQRVFDGLIERTSVVWTLLITRYVQAGCASKVVELFLHMLDDGFE-PDGYSMSSMISA 255

Query: 220 VAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCG---EVERAELLFRDIVRPDL 276
             E+  +RLG ++  + L+LG      V  GLV  Y+K      +E A  +F+ + R ++
Sbjct: 256 CTELGSVRLGQQLHSVALRLGLVSDSCVSCGLVDMYAKLKMERSMEHARKVFKTMPRHNV 315

Query: 277 ISCNAMISGYTCNGKTESS-LRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHS 335
           +S  A+ISGY  +G  E++ + LFR++L  + R N  T   L+              IH+
Sbjct: 316 MSWTALISGYVQSGVQENNVMALFREMLNESIRPNHITYSNLLKACANLSDQDSGRQIHA 375

Query: 336 FCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEE 395
             LK+ I   + V  AL ++Y+    ME ARK FD+  E ++ S +  +     N     
Sbjct: 376 HVLKTSIAHVNVVGNALVSMYAESGCMEEARKAFDQLYETNILSMSPDVETERNNA---- 431

Query: 396 AISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALID 455
             S   +++      +  T +S+LSA A +G ++ G+ +H L     F S+  +S +L+ 
Sbjct: 432 --SCSSKIEGMDDGVSTFTFASLLSAAASVGLLTKGQKLHALSMKAGFRSDQGISNSLVS 489

Query: 456 MYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVT 515
           MYA+CG + +A   FD M   + ++W ++ISG   HG+  +AL +F +M+ +G++P+ VT
Sbjct: 490 MYARCGYLEDACRAFDEMKDHNVISWTSIISGLAKHGYAKQALSMFHDMILAGVKPNDVT 549

Query: 516 FLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGL 575
           +++VL ACSH GLV+EG E F+SM  DHG  P  EHYAC+VD+L R+G +E+A +FI  +
Sbjct: 550 YIAVLSACSHVGLVKEGKEHFRSMQKDHGLLPRMEHYACIVDLLARSGLVEEARQFINEM 609

Query: 576 AVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAA 635
             +    VW  LL AC  + +T +  +A+  +  L+P +   +VLLSN+Y+    + + A
Sbjct: 610 PCKADALVWKTLLSACRTYGNTEIGEIAANHVINLEPRDPAPYVLLSNLYADAGLWDEVA 669

Query: 636 TVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQT 695
            +R +++ + L+K  G + ++VG T H F +GD  HP +  IYA L  L  ++++ G+  
Sbjct: 670 RIRSLMRDKNLSKETGLSWMDVGNTIHEFRAGDTSHPLAIDIYAKLVTLIREIKDIGYVP 729

Query: 696 ETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFIS 755
           +T   LHD+ EE KE  +  HSEK+A+AFGLI T     +RI KNLRVC DCH+A K+IS
Sbjct: 730 DTSIVLHDMSEELKEQYLLQHSEKIAVAFGLITTSATKPMRIFKNLRVCADCHSAIKYIS 789

Query: 756 KVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           K TGR I++RD+NRFH  K G+CSCG+YW
Sbjct: 790 KSTGREIILRDSNRFHRMKDGICSCGEYW 818



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 114/362 (31%), Positives = 180/362 (49%), Gaps = 19/362 (5%)

Query: 210 STSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHD-HVYVLTGLVSFYSKCGEVERAELLF 268
           S   A +L + A   +LRLG  +    L+    D    V   L++ YSKCG VE A  +F
Sbjct: 40  SCDAAKLLTSAARAGDLRLGRALHRRLLRSEILDTDAVVANSLLTMYSKCGAVEAARRVF 99

Query: 269 RDI--VRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGH 326
             +  VR DL+S  AM S    NG    SLRL  ++L    R N+ T+       +P   
Sbjct: 100 DQMCGVR-DLVSWTAMASCLARNGAERESLRLLGEMLELGLRPNAFTLCAAARACFPQEL 158

Query: 327 LHLT-NCIHSFCLKSGIV-SNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMI 384
             L    +  F LK+G   ++ SV  AL  +++R  ++ AA+++FD   E++   W  +I
Sbjct: 159 FRLAGGVVLGFVLKTGFWGTDVSVGCALIDMFARNGDLVAAQRVFDGLIERTSVVWTLLI 218

Query: 385 AGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFE 444
             Y Q G   + + LF  M      P+  ++SS++SAC +LG++ LG+ +H +       
Sbjct: 219 TRYVQAGCASKVVELFLHMLDDGFEPDGYSMSSMISACTELGSVRLGQQLHSVALRLGLV 278

Query: 445 SNIYVSTALIDMYAKCG---NIVEARELFDLMSHKSEVTWNTMISGYGLHG-HGLEALQL 500
           S+  VS  L+DMYAK     ++  AR++F  M   + ++W  +ISGY   G      + L
Sbjct: 279 SDSCVSCGLVDMYAKLKMERSMEHARKVFKTMPRHNVMSWTALISGYVQSGVQENNVMAL 338

Query: 501 FSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILG 560
           F EML+  IRP+ +T+ ++L AC++       D+     IH H  K    H    V+++G
Sbjct: 339 FREMLNESIRPNHITYSNLLKACANL-----SDQDSGRQIHAHVLKTSIAH----VNVVG 389

Query: 561 RA 562
            A
Sbjct: 390 NA 391



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 131/471 (27%), Positives = 222/471 (47%), Gaps = 32/471 (6%)

Query: 114 VLSAASACCDRSIGVLLHGHAIVSG-YGSDLFVGAALVDLYFKFSWVKSARKVFDKM-PE 171
           +L++A+   D  +G  LH   + S    +D  V  +L+ +Y K   V++AR+VFD+M   
Sbjct: 46  LLTSAARAGDLRLGRALHRRLLRSEILDTDAVVANSLLTMYSKCGAVEAARRVFDQMCGV 105

Query: 172 KDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRL-GM 230
           +D V W +M S L +N   ++S+ + G+M+  G    ++ ++ A   A    +  RL G 
Sbjct: 106 RDLVSWTAMASCLARNGAERESLRLLGEMLELGLR-PNAFTLCAAARACFPQELFRLAGG 164

Query: 231 EIQCLGLKLGF-HDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCN 289
            +    LK GF    V V   L+  +++ G++  A+ +F  ++    +    +I+ Y   
Sbjct: 165 VVLGFVLKTGFWGTDVSVGCALIDMFARNGDLVAAQRVFDGLIERTSVVWTLLITRYVQA 224

Query: 290 GKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVL 349
           G     + LF  +L      +  ++  +I      G + L   +HS  L+ G+VS+S V 
Sbjct: 225 GCASKVVELFLHMLDDGFEPDGYSMSSMISACTELGSVRLGQQLHSVALRLGLVSDSCVS 284

Query: 350 TALSTVYSRLN---EMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAI-SLFQEMQA 405
             L  +Y++L     ME ARK+F      ++ SW A+I+GY Q+G+ E  + +LF+EM  
Sbjct: 285 CGLVDMYAKLKMERSMEHARKVFKTMPRHNVMSWTALISGYVQSGVQENNVMALFREMLN 344

Query: 406 SKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVE 465
             + PN +T S++L ACA L     G+ +H  V   +      V  AL+ MYA+ G + E
Sbjct: 345 ESIRPNHITYSNLLKACANLSDQDSGRQIHAHVLKTSIAHVNVVGNALVSMYAESGCMEE 404

Query: 466 ARELFDL--------MSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFL 517
           AR+ FD         MS   E   N       + G            +  G+  S  TF 
Sbjct: 405 ARKAFDQLYETNILSMSPDVETERNNASCSSKIEG------------MDDGV--STFTFA 450

Query: 518 SVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKA 568
           S+L A +  GL+ +G ++  ++    GF+        +V +  R G LE A
Sbjct: 451 SLLSAAASVGLLTKGQKL-HALSMKAGFRSDQGISNSLVSMYARCGYLEDA 500



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 96/433 (22%), Positives = 185/433 (42%), Gaps = 56/433 (12%)

Query: 59  YARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAA 118
           +AR +F ++P+ ++  +  +I G+  + + ++++        N ++ P++ TYS +L A 
Sbjct: 302 HARKVFKTMPRHNVMSWTALISGYVQSGVQENNVMALFREMLNESIRPNHITYSNLLKAC 361

Query: 119 SACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWN 178
           +   D+  G  +H H + +       VG ALV +Y +   ++ ARK FD++ E + +  +
Sbjct: 362 ANLSDQDSGRQIHAHVLKTSIAHVNVVGNALVSMYAESGCMEEARKAFDQLYETNILSMS 421

Query: 179 SMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLK 238
             +     N      I    D V        + + A++L A A V  L  G ++  L +K
Sbjct: 422 PDVETERNNASCSSKIEGMDDGV-------STFTFASLLSAAASVGLLTKGQKLHALSMK 474

Query: 239 LGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRL 298
            GF     +   LVS Y++CG +E A   F ++   ++IS  ++ISG   +G  + +L +
Sbjct: 475 AGFRSDQGISNSLVSMYARCGYLEDACRAFDEMKDHNVISWTSIISGLAKHGYAKQALSM 534

Query: 299 FRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSR 358
           F  ++ +  + N  T + +           L+ C H   +K G         ++   +  
Sbjct: 535 FHDMILAGVKPNDVTYIAV-----------LSACSHVGLVKEG----KEHFRSMQKDHGL 579

Query: 359 LNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSI 418
           L  ME                +  ++    ++GL EEA     EM       + +   ++
Sbjct: 580 LPRME---------------HYACIVDLLARSGLVEEARQFINEMPCK---ADALVWKTL 621

Query: 419 LSACAQLGAISLGKWVHELVKSRNFE----------SNIYVSTALIDMYAKCGNIVEARE 468
           LSAC   G   +G+     V   N E          SN+Y    L D  A+  +++  + 
Sbjct: 622 LSACRTYGNTEIGEIAANHVI--NLEPRDPAPYVLLSNLYADAGLWDEVARIRSLMRDKN 679

Query: 469 LFDLMSHKSEVTW 481
           L    S ++ ++W
Sbjct: 680 L----SKETGLSW 688



 Score = 69.7 bits (169), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 53/176 (30%), Positives = 87/176 (49%), Gaps = 4/176 (2%)

Query: 416 SSILSACAQLGAISLGKWVHE-LVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMS 474
           + +L++ A+ G + LG+ +H  L++S   +++  V+ +L+ MY+KCG +  AR +FD M 
Sbjct: 44  AKLLTSAARAGDLRLGRALHRRLLRSEILDTDAVVANSLLTMYSKCGAVEAARRVFDQMC 103

Query: 475 H-KSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGD 533
             +  V+W  M S    +G   E+L+L  EML  G+RP+  T  +   AC    L R   
Sbjct: 104 GVRDLVSWTAMASCLARNGAERESLRLLGEMLELGLRPNAFTLCAAARACFPQELFRLAG 163

Query: 534 EIFQSMIHDHGFKPLAEHYAC-MVDILGRAGQLEKALEFIKGLAVEPGPAVWGALL 588
            +    +   GF        C ++D+  R G L  A     GL +E    VW  L+
Sbjct: 164 GVVLGFVLKTGFWGTDVSVGCALIDMFARNGDLVAAQRVFDGL-IERTSVVWTLLI 218


>gi|147770672|emb|CAN62482.1| hypothetical protein VITISV_010810 [Vitis vinifera]
          Length = 704

 Score =  441 bits (1135), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 231/595 (38%), Positives = 357/595 (60%), Gaps = 1/595 (0%)

Query: 190 FQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLT 249
           + +++ +F  +  NG   +DS +  A++ A   ++ +R   ++    +  G     Y+  
Sbjct: 111 YHEALELFEILELNGAYDMDSETYDALVSACIGLKSIRGVKKVFNYMINSGLDPDEYLRN 170

Query: 250 GLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERV 309
            ++  + KCG +  A  LF ++   +++S N +I G    G    + RLF  +       
Sbjct: 171 RVLLMHVKCGMMIDARRLFDEMPEKNILSWNTIIGGLVDAGDYFEAFRLFLMMWQXFSDA 230

Query: 310 NSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLF 369
            S   V +I      G +     +HS  LK+G+  +  V  AL  +YS+   +E A+ +F
Sbjct: 231 GSRMFVTMIRASAGLGLIFAGRQLHSCSLKTGVGGDVFVACALIDMYSKCGSIEDAQCVF 290

Query: 370 DESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAIS 429
           D+  EK+   WN++IAGY  +G +EEA+S++ EM+ S V  +  T S I+  CA+L ++ 
Sbjct: 291 DQMPEKTTVGWNSIIAGYALHGYSEEALSMYYEMRDSGVKIDNFTFSIIIRICARLASLE 350

Query: 430 LGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYG 489
             K  H  +    F  +I  +TAL+D+Y+K G I +A+ +FD+M HK+ ++WN +I+GYG
Sbjct: 351 HAKQAHAGLVRHGFGLDIVANTALVDLYSKWGRIEDAKHVFDMMPHKNVISWNALIAGYG 410

Query: 490 LHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLA 549
            HG G+EA+++F  MLH G+ P+ VTFL+VL ACS++GL   G EIF+SM  DH  KP A
Sbjct: 411 NHGRGVEAVEMFERMLHEGMVPNHVTFLAVLSACSYSGLSDRGWEIFESMSRDHKIKPRA 470

Query: 550 EHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFE 609
            HYACM+++LGR G L++A   IK    +P   +W ALL AC +HK+  L + A+EKL+ 
Sbjct: 471 MHYACMIELLGREGLLDEAFALIKDAPFKPTVNMWAALLTACRVHKNFELGKFAAEKLYG 530

Query: 610 LDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQ 669
           + PE +  +V+L NIY+      +AA V Q +K+R L   P C+ IE+   P+ F SGD+
Sbjct: 531 MGPEKLSNYVVLLNIYNXSGRLEEAAAVIQTLKRRGLRMLPACSWIEIKKQPYGFISGDK 590

Query: 670 LHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIAT 729
            H QS  IY  L++L  ++ + G+  +    L DV+E+E+ +++  HSEKLAIAFGLI T
Sbjct: 591 CHAQSKEIYQKLDELMLEISKHGYVPQXKFLLPDVDEQEERVLL-YHSEKLAIAFGLINT 649

Query: 730 EPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
              T ++I+++ R+C DCH+A K I+ VT R IVVRDA+RFHHFK G CSCGDYW
Sbjct: 650 SDWTPLQIVQSHRICGDCHSAIKLIALVTRREIVVRDASRFHHFKDGSCSCGDYW 704



 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 124/497 (24%), Positives = 231/497 (46%), Gaps = 30/497 (6%)

Query: 68  PKPDLFLFNVIIRGFSNN---EMPKSSIC-----------------FYTHLRKNTALTPD 107
           PKP     NV      N      P S +C                  +  L  N A   D
Sbjct: 71  PKPSTIELNVGKEAQVNETQLRKPSSELCGQIEKLVFFKRYHEALELFEILELNGAYDMD 130

Query: 108 NFTYSFVLSAASACCDRSI-GVL-LHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKV 165
           + TY  ++SA      +SI GV  +  + I SG   D ++   ++ ++ K   +  AR++
Sbjct: 131 SETYDALVSACIGL--KSIRGVKKVFNYMINSGLDPDEYLRNRVLLMHVKCGMMIDARRL 188

Query: 166 FDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQE 225
           FD+MPEK+ + WN++I GL+    + ++  +F  M+    +   S     ++ A A +  
Sbjct: 189 FDEMPEKNILSWNTIIGGLVDAGDYFEAFRLFL-MMWQXFSDAGSRMFVTMIRASAGLGL 247

Query: 226 LRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISG 285
           +  G ++    LK G    V+V   L+  YSKCG +E A+ +F  +     +  N++I+G
Sbjct: 248 IFAGRQLHSCSLKTGVGGDVFVACALIDMYSKCGSIEDAQCVFDQMPEKTTVGWNSIIAG 307

Query: 286 YTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSN 345
           Y  +G +E +L ++ ++  S  ++++ T   +I +      L      H+  ++ G   +
Sbjct: 308 YALHGYSEEALSMYYEMRDSGVKIDNFTFSIIIRICARLASLEHAKQAHAGLVRHGFGLD 367

Query: 346 SSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQA 405
               TAL  +YS+   +E A+ +FD    K++ SWNA+IAGY  +G   EA+ +F+ M  
Sbjct: 368 IVANTALVDLYSKWGRIEDAKHVFDMMPHKNVISWNALIAGYGNHGRGVEAVEMFERMLH 427

Query: 406 SKVAPNPVTVSSILSACAQLGAISLGKWVHE-LVKSRNFESNIYVSTALIDMYAKCGNIV 464
             + PN VT  ++LSAC+  G    G  + E + +    +        +I++  + G + 
Sbjct: 428 EGMVPNHVTFLAVLSACSYSGLSDRGWEIFESMSRDHKIKPRAMHYACMIELLGREGLLD 487

Query: 465 EARELFDLMSHKSEVT-WNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVT-FLSVLYA 522
           EA  L      K  V  W  +++   +H +  E  +  +E L+ G+ P  ++ ++ +L  
Sbjct: 488 EAFALIKDAPFKPTVNMWAALLTACRVHKN-FELGKFAAEKLY-GMGPEKLSNYVVLLNI 545

Query: 523 CSHAGLVREGDEIFQSM 539
            + +G + E   + Q++
Sbjct: 546 YNXSGRLEEAAAVIQTL 562



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 45/178 (25%), Positives = 86/178 (48%), Gaps = 1/178 (0%)

Query: 27  QTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNE 86
           Q H+  +  G   D+     L    S   +   A+ +F  +P+     +N II G++ + 
Sbjct: 253 QLHSCSLKTGVGGDVFVACALIDMYSKCGSIEDAQCVFDQMPEKTTVGWNSIIAGYALHG 312

Query: 87  MPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVG 146
             + ++  Y  +R ++ +  DNFT+S ++   +           H   +  G+G D+   
Sbjct: 313 YSEEALSMYYEMR-DSGVKIDNFTFSIIIRICARLASLEHAKQAHAGLVRHGFGLDIVAN 371

Query: 147 AALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNG 204
            ALVDLY K+  ++ A+ VFD MP K+ + WN++I+G   +    +++ +F  M+  G
Sbjct: 372 TALVDLYSKWGRIEDAKHVFDMMPHKNVISWNALIAGYGNHGRGVEAVEMFERMLHEG 429


>gi|297844454|ref|XP_002890108.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297335950|gb|EFH66367.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 866

 Score =  441 bits (1134), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 252/724 (34%), Positives = 402/724 (55%), Gaps = 6/724 (0%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           A  +F  + + +LF +NV++ G++       +IC Y  +     + PD +T+  VL    
Sbjct: 148 AWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAICLYHRMLWVGGVKPDVYTFPCVLRTCG 207

Query: 120 ACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNS 179
              D + G  +H H +  GY  D+ V  AL+ +Y K   VKSAR +FD+MP +D + WN+
Sbjct: 208 GIPDLARGREVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNA 267

Query: 180 MISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKL 239
           MISG  +N    + + +F  M R      D  ++ +V+ A   + + RLG +I    +  
Sbjct: 268 MISGYFENGMGHEGLKLFFAM-RGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITT 326

Query: 240 GFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLF 299
           GF   + V   L   Y   G    AE LF  +   D++S   MISGY  N   E ++  +
Sbjct: 327 GFAVDISVCNSLTQMYLYAGSWREAEKLFSRMDCKDIVSWTTMISGYEYNFLPEKAIDTY 386

Query: 300 RQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRL 359
           R +   + + +  T+  ++      G L     +H   +K+ ++S   V   L  +YS+ 
Sbjct: 387 RMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKC 446

Query: 360 NEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSIL 419
             ++ A  +F     K++ SW ++IAG   N    EA+  F++M+ + + PN +T+++ L
Sbjct: 447 KCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFFRQMKMT-LQPNAITLTAAL 505

Query: 420 SACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEV 479
           +ACA++GA+  GK +H  V       + ++  AL+DMY +CG +  A   F+  S K +V
Sbjct: 506 AACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNIAWNQFN--SQKKDV 563

Query: 480 T-WNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQS 538
           + WN +++GY   G G   ++LF  M+ + +RP  +TF+S+L  C  + +VR+G   F  
Sbjct: 564 SSWNILLTGYSERGQGSVVVELFDRMVKARVRPDEITFISLLCGCGKSQMVRQGLMYFSK 623

Query: 539 MIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTN 598
           M  ++G  P  +HYAC+VD+LGRAG+L++A +FI+ + V P PAVWGALL AC IH + +
Sbjct: 624 M-EEYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRIHHNID 682

Query: 599 LARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVG 658
           L  ++++++FELD  +VGY++LL N+Y+    + + A VR+++K+  L    GC+ +EV 
Sbjct: 683 LGELSAQRIFELDKGSVGYYILLCNLYADCGKWREVAKVRRMMKENGLTVDAGCSWVEVK 742

Query: 659 GTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSE 718
           G  H F S D+ HPQ+  I  +L+    KM E G  T + ++  D  E  ++ +   HSE
Sbjct: 743 GKVHAFLSDDKYHPQTKEINTVLDGFYEKMSEVGLTTSSESSSMDETEISRDEIFCGHSE 802

Query: 719 KLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVC 778
           + AIAFGLI + PG  I + KNL +C  CH   KFISK   R I VRD+  FHHFK G C
Sbjct: 803 RKAIAFGLINSVPGMPIWVTKNLNMCESCHDTVKFISKTVRREISVRDSEHFHHFKDGEC 862

Query: 779 SCGD 782
           SCGD
Sbjct: 863 SCGD 866



 Score =  201 bits (512), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 115/360 (31%), Positives = 188/360 (52%)

Query: 145 VGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNG 204
           +G A + ++ +F  +  A  VF KM E++   WN ++ G  K   F ++I ++  M+  G
Sbjct: 131 LGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAICLYHRMLWVG 190

Query: 205 GTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERA 264
           G   D  +   VL     + +L  G E+    ++ G+   + V+  L++ Y KCG+V+ A
Sbjct: 191 GVKPDVYTFPCVLRTCGGIPDLARGREVHVHVVRYGYELDIDVVNALITMYVKCGDVKSA 250

Query: 265 ELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPF 324
            LLF  + R D+IS NAMISGY  NG     L+LF  +   +   +  T+  +I      
Sbjct: 251 RLLFDRMPRRDIISWNAMISGYFENGMGHEGLKLFFAMRGLSVDPDLMTLTSVISACELL 310

Query: 325 GHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMI 384
           G   L   IH++ + +G   + SV  +L+ +Y        A KLF     K + SW  MI
Sbjct: 311 GDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLYAGSWREAEKLFSRMDCKDIVSWTTMI 370

Query: 385 AGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFE 444
           +GY  N L E+AI  ++ M    V P+ +TV+++LSACA LG +  G  +H+L       
Sbjct: 371 SGYEYNFLPEKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLI 430

Query: 445 SNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEM 504
           S + V+  LI+MY+KC  I +A ++F  +  K+ ++W ++I+G  L+    EAL  F +M
Sbjct: 431 SYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFFRQM 490



 Score = 72.8 bits (177), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 69/291 (23%), Positives = 120/291 (41%), Gaps = 39/291 (13%)

Query: 386 GYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFES 445
           G   NG  EEA+ L   MQ  +VA +     +++  C    A   G  V+ +  S     
Sbjct: 68  GLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAHEEGSKVYSVALSSMNSL 127

Query: 446 NIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEML 505
           ++ +  A + M+ + GN+V+A  +F  MS ++  +WN ++ GY   G+  EA+ L+  ML
Sbjct: 128 SVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAICLYHRML 187

Query: 506 H-SGIRPSGVTFLSVLYACS-----------HAGLVREGDEIFQSMIH------------ 541
              G++P   TF  VL  C            H  +VR G E+   +++            
Sbjct: 188 WVGGVKPDVYTFPCVLRTCGGIPDLARGREVHVHVVRYGYELDIDVVNALITMYVKCGDV 247

Query: 542 -------DHGFKPLAEHYACMVDILGRAGQLEKALEF---IKGLAVEPGPAVWGALLGAC 591
                  D   +     +  M+      G   + L+    ++GL+V+P      +++ AC
Sbjct: 248 KSARLLFDRMPRRDIISWNAMISGYFENGMGHEGLKLFFAMRGLSVDPDLMTLTSVISAC 307

Query: 592 MIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVK 642
            +  D  L R     +        G+ V +S   S  + YL A + R+  K
Sbjct: 308 ELLGDRRLGRDIHAYVI-----TTGFAVDISVCNSLTQMYLYAGSWREAEK 353


>gi|449469198|ref|XP_004152308.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g37170-like [Cucumis sativus]
 gi|449484855|ref|XP_004156999.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g37170-like [Cucumis sativus]
          Length = 724

 Score =  441 bits (1134), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 221/572 (38%), Positives = 327/572 (57%), Gaps = 32/572 (5%)

Query: 245 VYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNG-------------- 290
           +Y+   L+  Y+KCG +  AE +F ++V  DL S N MISGY   G              
Sbjct: 153 LYISNRLLDMYAKCGSLVDAEKVFDEMVHRDLCSWNIMISGYVKGGNFEKARNLFDKMPN 212

Query: 291 -----------------KTESSLRLFRQLLA-SAERVNSSTIVGLIPVFYPFGHLHLTNC 332
                            + E +L L+R +      + N  TI   +        LH+   
Sbjct: 213 RDNFSWTAIISGCVQHNRPEEALELYRLMQKHDYSKSNKCTISSALAASAAIPSLHMGKK 272

Query: 333 IHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGL 392
           IH   ++ G+ S+  V  +L  +Y +   +E AR +FD+  E+ + SW  MI  Y +NG 
Sbjct: 273 IHGHIMRMGLDSDEVVWCSLLDMYGKCGSIEEARYIFDKMEERDVVSWTTMIHTYLKNGR 332

Query: 393 TEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTA 452
            EE  +LF+ +  S + PN  T + +L+ACA L A  LGK +H  +    F+S    ++A
Sbjct: 333 REEGFALFRHLMNSNIMPNDFTFAGVLNACADLAAEDLGKQIHAYMVRVGFDSFSSAASA 392

Query: 453 LIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPS 512
           L+ MY+KCG+I  A+ +F+++      +W +++ GY  HG   +AL  F  +L SG +P 
Sbjct: 393 LVHMYSKCGDIENAKSVFEILPQPDLFSWTSLLVGYAQHGQHDKALHFFELLLKSGTKPD 452

Query: 513 GVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFI 572
           G+ F+ VL AC+HAGLV +G E F S+   HG     +HYAC++D+L RAGQ  +A   I
Sbjct: 453 GIAFIGVLSACAHAGLVDKGLEYFHSIKEKHGLTRTIDHYACIIDLLARAGQFTEAESII 512

Query: 573 KGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYL 632
             + ++P   +W ALLG C IH +  LA+ A++ LFE++PEN   +V L+NIY++     
Sbjct: 513 NEMPIKPDKYIWAALLGGCRIHGNLELAKRAAKSLFEIEPENPATYVTLANIYASAGMRA 572

Query: 633 QAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAG 692
           + A +R+ +  R + K PG + IE+    HVF+ GD  HP+S  I   L +L+ +M+E G
Sbjct: 573 EEANIRETMDSRGIVKKPGMSWIEIRREVHVFSVGDNSHPKSKEILEYLSELSKRMKEVG 632

Query: 693 FQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATK 752
           +  +T   LHDVE E+KE  +  HSEKLA+AFG+I+T  GT I++ KNLR C+DCH A K
Sbjct: 633 YVPDTNFVLHDVELEQKEENLSYHSEKLAVAFGIISTPSGTPIKVFKNLRTCVDCHNAIK 692

Query: 753 FISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           FIS +TGR I+VRD+NRFH F+GG CSC DYW
Sbjct: 693 FISNITGRKIIVRDSNRFHCFEGGSCSCKDYW 724



 Score =  159 bits (401), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 104/400 (26%), Positives = 196/400 (49%), Gaps = 3/400 (0%)

Query: 142 DLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMV 201
           DL     ++  Y K    + AR +FDKMP +D   W ++ISG +++   ++++ ++  M 
Sbjct: 183 DLCSWNIMISGYVKGGNFEKARNLFDKMPNRDNFSWTAIISGCVQHNRPEEALELYRLMQ 242

Query: 202 RNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEV 261
           ++  +  +  ++++ L A A +  L +G +I    +++G      V   L+  Y KCG +
Sbjct: 243 KHDYSKSNKCTISSALAASAAIPSLHMGKKIHGHIMRMGLDSDEVVWCSLLDMYGKCGSI 302

Query: 262 ERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVF 321
           E A  +F  +   D++S   MI  Y  NG+ E    LFR L+ S    N  T  G++   
Sbjct: 303 EEARYIFDKMEERDVVSWTTMIHTYLKNGRREEGFALFRHLMNSNIMPNDFTFAGVLNAC 362

Query: 322 YPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWN 381
                  L   IH++ ++ G  S SS  +AL  +YS+  ++E A+ +F+   +  L SW 
Sbjct: 363 ADLAAEDLGKQIHAYMVRVGFDSFSSAASALVHMYSKCGDIENAKSVFEILPQPDLFSWT 422

Query: 382 AMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLG-KWVHELVKS 440
           +++ GY Q+G  ++A+  F+ +  S   P+ +    +LSACA  G +  G ++ H + + 
Sbjct: 423 SLLVGYAQHGQHDKALHFFELLLKSGTKPDGIAFIGVLSACAHAGLVDKGLEYFHSIKEK 482

Query: 441 RNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSE-VTWNTMISGYGLHGHGLEALQ 499
                 I     +ID+ A+ G   EA  + + M  K +   W  ++ G  +HG+ LE  +
Sbjct: 483 HGLTRTIDHYACIIDLLARAGQFTEAESIINEMPIKPDKYIWAALLGGCRIHGN-LELAK 541

Query: 500 LFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSM 539
             ++ L      +  T++++    + AG+  E   I ++M
Sbjct: 542 RAAKSLFEIEPENPATYVTLANIYASAGMRAEEANIRETM 581



 Score =  132 bits (333), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 108/392 (27%), Positives = 182/392 (46%), Gaps = 20/392 (5%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           AR LF  +P  D F +  II G   +  P+ ++  Y  ++K+     +  T S  L+A++
Sbjct: 203 ARNLFDKMPNRDNFSWTAIISGCVQHNRPEEALELYRLMQKHDYSKSNKCTISSALAASA 262

Query: 120 ACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNS 179
           A     +G  +HGH +  G  SD  V  +L+D+Y K   ++ AR +FDKM E+D V W +
Sbjct: 263 AIPSLHMGKKIHGHIMRMGLDSDEVVWCSLLDMYGKCGSIEEARYIFDKMEERDVVSWTT 322

Query: 180 MISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKL 239
           MI   +KN   ++   +F  ++ N     +  + A VL A A++    LG +I    +++
Sbjct: 323 MIHTYLKNGRREEGFALFRHLM-NSNIMPNDFTFAGVLNACADLAAEDLGKQIHAYMVRV 381

Query: 240 GFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLF 299
           GF       + LV  YSKCG++E A+ +F  + +PDL S  +++ GY  +G+ + +L  F
Sbjct: 382 GFDSFSSAASALVHMYSKCGDIENAKSVFEILPQPDLFSWTSLLVGYAQHGQHDKALHFF 441

Query: 300 RQLLASAERVNSSTIVGLIPVFYPFGHLHLTN----CIHSFCLKSGIVSNSSVLTALSTV 355
             LL S  + +    +G   V     H  L +      HS   K G+         +  +
Sbjct: 442 ELLLKSGTKPDGIAFIG---VLSACAHAGLVDKGLEYFHSIKEKHGLTRTIDHYACIIDL 498

Query: 356 YSRLNEMEAARKLFDESSEKSLAS-WNAMIAGYTQNGLTE----EAISLFQEMQASKVAP 410
            +R  +   A  + +E   K     W A++ G   +G  E     A SLF+      + P
Sbjct: 499 LARAGQFTEAESIINEMPIKPDKYIWAALLGGCRIHGNLELAKRAAKSLFE------IEP 552

Query: 411 -NPVTVSSILSACAQLGAISLGKWVHELVKSR 441
            NP T  ++ +  A  G  +    + E + SR
Sbjct: 553 ENPATYVTLANIYASAGMRAEEANIRETMDSR 584



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 46/150 (30%), Positives = 78/150 (52%), Gaps = 10/150 (6%)

Query: 395 EAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALI 454
           EA+ L   ++     P      ++L  C +  A+  GK VH  +K+      +Y+S  L+
Sbjct: 106 EAVQLLYRIEK----PYASIYLTLLKFCLKQRALKEGKQVHAHIKTSG-SIGLYISNRLL 160

Query: 455 DMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGV 514
           DMYAKCG++V+A ++FD M H+   +WN MISGY   G+  +A  LF +M +        
Sbjct: 161 DMYAKCGSLVDAEKVFDEMVHRDLCSWNIMISGYVKGGNFEKARNLFDKMPNR----DNF 216

Query: 515 TFLSVLYACSHAGLVREGDEIFQSM-IHDH 543
           ++ +++  C       E  E+++ M  HD+
Sbjct: 217 SWTAIISGCVQHNRPEEALELYRLMQKHDY 246



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 41/160 (25%), Positives = 76/160 (47%), Gaps = 5/160 (3%)

Query: 27  QTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNE 86
           Q HA ++  GF +  S  + L H  S       A+++F  +P+PDLF +  ++ G++ + 
Sbjct: 373 QIHAYMVRVGFDSFSSAASALVHMYSKCGDIENAKSVFEILPQPDLFSWTSLLVGYAQHG 432

Query: 87  MPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVG 146
               ++ F+  L K +   PD   +  VLSA +       G L + H+I   +G    + 
Sbjct: 433 QHDKALHFFELLLK-SGTKPDGIAFIGVLSACAHAGLVDKG-LEYFHSIKEKHGLTRTID 490

Query: 147 --AALVDLYFKFSWVKSARKVFDKMPEK-DTVLWNSMISG 183
             A ++DL  +      A  + ++MP K D  +W +++ G
Sbjct: 491 HYACIIDLLARAGQFTEAESIINEMPIKPDKYIWAALLGG 530


>gi|297839333|ref|XP_002887548.1| hypothetical protein ARALYDRAFT_339650 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297333389|gb|EFH63807.1| hypothetical protein ARALYDRAFT_339650 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1221

 Score =  441 bits (1134), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 241/658 (36%), Positives = 373/658 (56%), Gaps = 43/658 (6%)

Query: 130 LHGHAIVSGYGSD-LFVGAALVDLYFKFS-WVKSARKVFDKMPEKDTVLWNSMISGLMKN 187
           +HG  I SG  +D  F+G  ++      S  +  AR++    PE D  ++N+++ G  ++
Sbjct: 191 IHGFFIKSGVDTDSYFIGKLILHCAISISDALPYARRLLLCFPEPDAFMFNTLVRGYSES 250

Query: 188 CCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYV 247
               +S+ VF +M+R G  + DS S A V+ A A  + LR G ++ C  LK G   H++V
Sbjct: 251 DEPHNSVAVFVEMMRKGFIFPDSFSFAFVVKAAANFRSLRTGFQMHCQALKHGLDSHLFV 310

Query: 248 LTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAE 307
            T L+  Y +CG V  A  +F ++ +P+L++ NA+++          +  +F ++L    
Sbjct: 311 ATTLIGMYGECGCVGFARKVFDEMPQPNLVAWNAVVTACFRGNDVSGAREIFDKML---- 366

Query: 308 RVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARK 367
                                              V N +    +   Y +  E+E A++
Sbjct: 367 -----------------------------------VRNHTSWNVMLAGYIKAGELECAKR 391

Query: 368 LFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGA 427
           +F E   +   SW+ MI G++ NG   E+ S F+E+  +++ PN V+++ +LSAC+Q GA
Sbjct: 392 IFSEMPHRDDVSWSTMIVGFSHNGSFNESFSYFRELLRAEMRPNEVSLTGVLSACSQSGA 451

Query: 428 ISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHK-SEVTWNTMIS 486
              GK +H  V+   +   + V+ ALIDMY++CGN+  AR +F+ M  K S V+W +MI+
Sbjct: 452 FEFGKTLHGFVEKSGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRSIVSWTSMIA 511

Query: 487 GYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFK 546
           G  +HGHG EA+++F+EM  SG+ P  ++F+S+LYACSHAGL++EG+  F  M   +  +
Sbjct: 512 GLAMHGHGEEAIRIFNEMTESGVMPDEISFISLLYACSHAGLIKEGEGYFSKMKRVYHIE 571

Query: 547 PLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEK 606
           P  EHY CMVD+ GR+G+L+KA  FI  + + P   VW  LLGAC  H +  LA    ++
Sbjct: 572 PAVEHYGCMVDLYGRSGKLQKAYSFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQR 631

Query: 607 LFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTS 666
           L ELDP N G  VLLSN+Y+    +   A++R+ +  +++ K    +L+EVG T + FT+
Sbjct: 632 LNELDPNNSGDLVLLSNVYATAGKWKDVASIRKSMIVQRIKKITAWSLVEVGKTMYKFTA 691

Query: 667 GDQLHPQSTAIYAMLEKLNGKMR-EAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFG 725
            ++        +  L+++  ++R EAG+  E  +AL+DVEEEEKE  +  HSEKLA+AF 
Sbjct: 692 CEKKKEIDIEAHEKLKEIILRLRDEAGYAPEVASALYDVEEEEKEDQVSKHSEKLALAFA 751

Query: 726 LIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDY 783
           L     G  IRI+KNLR+C DCH   K  S+V G  IV+RD NRFH FK G CSCGDY
Sbjct: 752 LARLPKGANIRIVKNLRICRDCHAVMKLTSRVYGVEIVIRDRNRFHSFKDGSCSCGDY 809



 Score =  209 bits (532), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 153/530 (28%), Positives = 247/530 (46%), Gaps = 54/530 (10%)

Query: 20  KTQSQLTQTHAQIIIHGFQNDLSTVTKL----AHRLSDFKATCYARALFFSIPKPDLFLF 75
           K    LTQ H   I  G   D   + KL    A  +SD  A  YAR L    P+PD F+F
Sbjct: 183 KNLRALTQIHGFFIKSGVDTDSYFIGKLILHCAISISD--ALPYARRLLLCFPEPDAFMF 240

Query: 76  NVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAI 135
           N ++RG+S ++ P +S+  +  + +   + PD+F+++FV+ AA+       G  +H  A+
Sbjct: 241 NTLVRGYSESDEPHNSVAVFVEMMRKGFIFPDSFSFAFVVKAAANFRSLRTGFQMHCQAL 300

Query: 136 VSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIW 195
             G  S LFV   L+ +Y +   V  ARKVFD+MP+ + V WN++++   +      +  
Sbjct: 301 KHGLDSHLFVATTLIGMYGECGCVGFARKVFDEMPQPNLVAWNAVVTACFRGNDVSGARE 360

Query: 196 VFGDM-VRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSF 254
           +F  M VRN  +W                                           +++ 
Sbjct: 361 IFDKMLVRNHTSW-----------------------------------------NVMLAG 379

Query: 255 YSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTI 314
           Y K GE+E A+ +F ++   D +S + MI G++ NG    S   FR+LL +  R N  ++
Sbjct: 380 YIKAGELECAKRIFSEMPHRDDVSWSTMIVGFSHNGSFNESFSYFRELLRAEMRPNEVSL 439

Query: 315 VGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSE 374
            G++      G       +H F  KSG     SV  AL  +YSR   +  AR +F+   E
Sbjct: 440 TGVLSACSQSGAFEFGKTLHGFVEKSGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQE 499

Query: 375 K-SLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGK- 432
           K S+ SW +MIAG   +G  EEAI +F EM  S V P+ ++  S+L AC+  G I  G+ 
Sbjct: 500 KRSIVSWTSMIAGLAMHGHGEEAIRIFNEMTESGVMPDEISFISLLYACSHAGLIKEGEG 559

Query: 433 WVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMS-HKSEVTWNTMISGYGLH 491
           +  ++ +  + E  +     ++D+Y + G + +A      M    + + W T++     H
Sbjct: 560 YFSKMKRVYHIEPAVEHYGCMVDLYGRSGKLQKAYSFICQMPIPPTAIVWRTLLGACSSH 619

Query: 492 GHGLEALQLFSEMLHSGIRPSG-VTFLSVLYACSHAGLVREGDEIFQSMI 540
           G+   A Q+   +       SG +  LS +YA   AG  ++   I +SMI
Sbjct: 620 GNIELAEQVKQRLNELDPNNSGDLVLLSNVYAT--AGKWKDVASIRKSMI 667


>gi|357116509|ref|XP_003560023.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g25360-like [Brachypodium distachyon]
          Length = 804

 Score =  441 bits (1133), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 248/711 (34%), Positives = 383/711 (53%), Gaps = 74/711 (10%)

Query: 148 ALVDLYFKFSWVKSARKVFDKMP--EKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGG 205
           +LV  Y     ++ +   FD +P   +DTVL N+MIS   +      ++ VF  ++ +  
Sbjct: 94  SLVSAYAVAGRLRDSAAFFDSVPVARRDTVLHNAMISAFARASLAAPAVSVFRSLLASDD 153

Query: 206 TWL-DSTSVAAVLPAVAEVQELRLG--MEIQCLGLKLGFHDHVYVLTGLVSFYSKC---- 258
           +   D  S  ++L AV ++ +L +    ++ C   KLG    + V   L++ Y KC    
Sbjct: 154 SLRPDDYSFTSLLSAVGQMHDLAVSHCTQLHCAVHKLGAGAVLSVSNALIALYMKCDAPG 213

Query: 259 ------------------------------GEVERAELLFRDIVRPDLISCNAMISGYTC 288
                                         G+V  A   F +I     +  NAMISGY  
Sbjct: 214 VTRDARKVLDEMPEKDELTWTTIVVGHVRKGDVHAARSAFEEIDGEFDVVWNAMISGYVQ 273

Query: 289 NGKTESSLRLFRQLLASAERVNSSTIVGLI-----------------------PVFYPFG 325
           +G    +  LFR++++     +  T   L+                       P F P  
Sbjct: 274 SGMCAEAFELFRRMVSKRIPPDEFTFTSLLSACANAGFFLHGKSVHGQFIRLQPDFVPEA 333

Query: 326 HLHLTNCIHSFCLKSGIVSNSSVL---------TALSTVYSRLNE---MEAARKLFDESS 373
            L + N + +   KSG ++ ++ +          + +T+ S   E   ++ A ++F E  
Sbjct: 334 ALPVNNALVTLYSKSGKIAVATKIFDSMTLKDVVSWNTILSGYIESGCLDNAARIFKEMP 393

Query: 374 EKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKW 433
            KS  SW  M++GY   GL E+A+ LF +M++  V P   T +  ++AC +LGA+  GK 
Sbjct: 394 YKSELSWMVMVSGYVHGGLAEDALKLFNQMRSEDVKPCDYTYAGAVAACGELGALKHGKQ 453

Query: 434 VHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGH 493
           +H  +    FE++     AL+ MYA+CG + +AR +F +M +   V+WN MIS  G HGH
Sbjct: 454 LHAHLVQCGFEASNSAGNALLTMYARCGAVKDARLVFLVMPNVDSVSWNAMISALGQHGH 513

Query: 494 GLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYA 553
           G EAL+LF +M+  GI P  ++FL++L AC+HAGLV +G + F+SM  D G  P  +HYA
Sbjct: 514 GREALELFDQMVAQGIYPDRISFLTILTACNHAGLVDDGFQYFESMERDFGISPGEDHYA 573

Query: 554 CMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPE 613
            ++D+LGRAG++ +A + IK +  EP PA+W A+L  C I+ D  L   A+++LF++ PE
Sbjct: 574 RLIDLLGRAGRIGEARDLIKTMPFEPTPAIWEAILSGCRINGDMELGAYAADQLFKMVPE 633

Query: 614 NVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQ 673
           + G ++LLSN YSA   ++ AA VR++++ R + K PGC+ IEVG   HVF  GD  HP 
Sbjct: 634 HDGTYILLSNTYSAAGRWVDAARVRKLMRDRGVKKEPGCSWIEVGNKVHVFLVGDTKHPD 693

Query: 674 STAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGT 733
           +  +Y  LE +  KMR+ G+  +T  AL D+   EKE ++  HSE+LA++FGL+    G 
Sbjct: 694 AHEVYRFLEMVGAKMRKLGYVPDTKFALQDMAPHEKEYVLFAHSERLAVSFGLLKLPAGA 753

Query: 734 EIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
            + ++KNL++C DCHTA  F+S+  GR IVVRD  RFHHFK G CSCG+YW
Sbjct: 754 TVTVLKNLKICGDCHTAMMFMSRAVGREIVVRDVRRFHHFKDGECSCGNYW 804



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 134/528 (25%), Positives = 224/528 (42%), Gaps = 83/528 (15%)

Query: 41  LSTVTKLAHRLSDFKATCYARALFFSIP--KPDLFLFNVIIRGFSNNEMPKSSI-CFYTH 97
           L +   +A RL D      + A F S+P  + D  L N +I  F+   +   ++  F + 
Sbjct: 95  LVSAYAVAGRLRD------SAAFFDSVPVARRDTVLHNAMISAFARASLAAPAVSVFRSL 148

Query: 98  LRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVS--GYGSDLFVGAALVDLYFK 155
           L  + +L PD+++++ +LSA     D ++      H  V   G G+ L V  AL+ LY K
Sbjct: 149 LASDDSLRPDDYSFTSLLSAVGQMHDLAVSHCTQLHCAVHKLGAGAVLSVSNALIALYMK 208

Query: 156 FSW---VKSARKVFDKMPEKD-------------------------------TVLWNSMI 181
                  + ARKV D+MPEKD                                V+WN+MI
Sbjct: 209 CDAPGVTRDARKVLDEMPEKDELTWTTIVVGHVRKGDVHAARSAFEEIDGEFDVVWNAMI 268

Query: 182 SGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEI--QCLGLKL 239
           SG +++    ++  +F  MV +     D  +  ++L A A       G  +  Q + L+ 
Sbjct: 269 SGYVQSGMCAEAFELFRRMV-SKRIPPDEFTFTSLLSACANAGFFLHGKSVHGQFIRLQP 327

Query: 240 GF--HDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNA---------------- 281
            F     + V   LV+ YSK G++  A  +F  +   D++S N                 
Sbjct: 328 DFVPEAALPVNNALVTLYSKSGKIAVATKIFDSMTLKDVVSWNTILSGYIESGCLDNAAR 387

Query: 282 ---------------MISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGH 326
                          M+SGY   G  E +L+LF Q+ +   +    T  G +      G 
Sbjct: 388 IFKEMPYKSELSWMVMVSGYVHGGLAEDALKLFNQMRSEDVKPCDYTYAGAVAACGELGA 447

Query: 327 LHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAG 386
           L     +H+  ++ G  +++S   AL T+Y+R   ++ AR +F         SWNAMI+ 
Sbjct: 448 LKHGKQLHAHLVQCGFEASNSAGNALLTMYARCGAVKDARLVFLVMPNVDSVSWNAMISA 507

Query: 387 YTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLG-KWVHELVKSRNFES 445
             Q+G   EA+ LF +M A  + P+ ++  +IL+AC   G +  G ++   + +      
Sbjct: 508 LGQHGHGREALELFDQMVAQGIYPDRISFLTILTACNHAGLVDDGFQYFESMERDFGISP 567

Query: 446 NIYVSTALIDMYAKCGNIVEARELFDLMS-HKSEVTWNTMISGYGLHG 492
                  LID+  + G I EAR+L   M    +   W  ++SG  ++G
Sbjct: 568 GEDHYARLIDLLGRAGRIGEARDLIKTMPFEPTPAIWEAILSGCRING 615



 Score =  129 bits (324), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 106/362 (29%), Positives = 163/362 (45%), Gaps = 49/362 (13%)

Query: 249 TGLVSFYSKCGEVERAELLFRDI--VRPDLISCNAMISGYTCNGKTESSLRLFRQLLASA 306
           T LVS Y+  G +  +   F  +   R D +  NAMIS +        ++ +FR LLAS 
Sbjct: 93  TSLVSAYAVAGRLRDSAAFFDSVPVARRDTVLHNAMISAFARASLAAPAVSVFRSLLASD 152

Query: 307 E--RVNSSTIVGLIPVFYPFGHLHLTNCIHSFCL--KSGIVSNSSVLTALSTVYSRLNE- 361
           +  R +  +   L+        L +++C    C   K G  +  SV  AL  +Y + +  
Sbjct: 153 DSLRPDDYSFTSLLSAVGQMHDLAVSHCTQLHCAVHKLGAGAVLSVSNALIALYMKCDAP 212

Query: 362 --MEAARKLFDESSEKSLAS-------------------------------WNAMIAGYT 388
                ARK+ DE  EK   +                               WNAMI+GY 
Sbjct: 213 GVTRDARKVLDEMPEKDELTWTTIVVGHVRKGDVHAARSAFEEIDGEFDVVWNAMISGYV 272

Query: 389 QNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVH----ELVKSRNFE 444
           Q+G+  EA  LF+ M + ++ P+  T +S+LSACA  G    GK VH     L      E
Sbjct: 273 QSGMCAEAFELFRRMVSKRIPPDEFTFTSLLSACANAGFFLHGKSVHGQFIRLQPDFVPE 332

Query: 445 SNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEM 504
           + + V+ AL+ +Y+K G I  A ++FD M+ K  V+WNT++SGY   G    A ++F EM
Sbjct: 333 AALPVNNALVTLYSKSGKIAVATKIFDSMTLKDVVSWNTILSGYIESGCLDNAARIFKEM 392

Query: 505 LHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQ 564
            +     S ++++ ++    H GL  +  ++F  M      KP    YA  V   G  G 
Sbjct: 393 PYK----SELSWMVMVSGYVHGGLAEDALKLFNQM-RSEDVKPCDYTYAGAVAACGELGA 447

Query: 565 LE 566
           L+
Sbjct: 448 LK 449



 Score = 96.7 bits (239), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 112/460 (24%), Positives = 185/460 (40%), Gaps = 87/460 (18%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           AR+ F  I      ++N +I G+  + M   +   +  +     + PD FT++ +LSA +
Sbjct: 249 ARSAFEEIDGEFDVVWNAMISGYVQSGMCAEAFELFRRMVSKR-IPPDEFTFTSLLSACA 307

Query: 120 ACCDRSIGVLLHGHAIVSGY---------GSDLFVGAALVDLYFKFSWVKSARKVFDKMP 170
                + G  LHG ++   +          + L V  ALV LY K   +  A K+FD M 
Sbjct: 308 -----NAGFFLHGKSVHGQFIRLQPDFVPEAALPVNNALVTLYSKSGKIAVATKIFDSMT 362

Query: 171 EKDTVLWNSMISGLMKNCCFQDSIWVFGDMVR--------------NGGTWLDSTSV--- 213
            KD V WN+++SG +++ C  ++  +F +M                +GG   D+  +   
Sbjct: 363 LKDVVSWNTILSGYIESGCLDNAARIFKEMPYKSELSWMVMVSGYVHGGLAEDALKLFNQ 422

Query: 214 -------------AAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGE 260
                        A  + A  E+  L+ G ++    ++ GF         L++ Y++CG 
Sbjct: 423 MRSEDVKPCDYTYAGAVAACGELGALKHGKQLHAHLVQCGFEASNSAGNALLTMYARCGA 482

Query: 261 VERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASA---ERVNSSTIVGL 317
           V+ A L+F  +   D +S NAMIS    +G    +L LF Q++A     +R++  TI   
Sbjct: 483 VKDARLVFLVMPNVDSVSWNAMISALGQHGHGREALELFDQMVAQGIYPDRISFLTI--- 539

Query: 318 IPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSL 377
                      LT C H     +G+V +          +     ME  R       E   
Sbjct: 540 -----------LTACNH-----AGLVDDG---------FQYFESME--RDFGISPGEDHY 572

Query: 378 ASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKW-VHE 436
           A    +I    + G   EA  L + M      P P    +ILS C   G + LG +   +
Sbjct: 573 AR---LIDLLGRAGRIGEARDLIKTM---PFEPTPAIWEAILSGCRINGDMELGAYAADQ 626

Query: 437 LVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHK 476
           L K        Y+   L + Y+  G  V+A  +  LM  +
Sbjct: 627 LFKMVPEHDGTYI--LLSNTYSAAGRWVDAARVRKLMRDR 664


>gi|15233584|ref|NP_193218.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75274931|sp|O23337.1|PP311_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g14820
 gi|2244839|emb|CAB10261.1| hypothetical protein [Arabidopsis thaliana]
 gi|7268228|emb|CAB78524.1| hypothetical protein [Arabidopsis thaliana]
 gi|332658106|gb|AEE83506.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 722

 Score =  441 bits (1133), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 230/661 (34%), Positives = 374/661 (56%), Gaps = 39/661 (5%)

Query: 162 ARKVFDKMPEK-DTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAV 220
           A  VF  +P   +++++N  +  L ++   + +I +F   +R+ G  LD  S   +L AV
Sbjct: 63  ALNVFSSIPSPPESIVFNPFLRDLSRSSEPRATI-LFYQRIRHVGGRLDQFSFLPILKAV 121

Query: 221 AEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCN 280
           ++V  L  GME+  +  K+      +V TG +  Y+ CG +  A  +F ++   D+++ N
Sbjct: 122 SKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWN 181

Query: 281 AMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKS 340
            MI  Y   G  + + +LF ++  S    +   +  ++      G++     I+ F +++
Sbjct: 182 TMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIEN 241

Query: 341 GIVSNSSVLTALSTVYSRLNEMEAARK-------------------------------LF 369
            +  ++ +LTAL T+Y+    M+ AR+                               +F
Sbjct: 242 DVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIF 301

Query: 370 DESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAIS 429
           D++ +K L  W  MI+ Y ++   +EA+ +F+EM  S + P+ V++ S++SACA LG + 
Sbjct: 302 DQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILD 361

Query: 430 LGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYG 489
             KWVH  +     ES + ++ ALI+MYAKCG +   R++F+ M  ++ V+W++MI+   
Sbjct: 362 KAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALS 421

Query: 490 LHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLA 549
           +HG   +AL LF+ M    + P+ VTF+ VLY CSH+GLV EG +IF SM  ++   P  
Sbjct: 422 MHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKL 481

Query: 550 EHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFE 609
           EHY CMVD+ GRA  L +ALE I+ + V     +WG+L+ AC IH +  L + A++++ E
Sbjct: 482 EHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHGELELGKFAAKRILE 541

Query: 610 LDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQ 669
           L+P++ G  VL+SNIY+ E+ +     +R+V++++ + K  G + I+  G  H F  GD+
Sbjct: 542 LEPDHDGALVLMSNIYAREQRWEDVRNIRRVMEEKNVFKEKGLSRIDQNGKSHEFLIGDK 601

Query: 670 LHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIAT 729
            H QS  IYA L+++  K++ AG+  +  + L DVEEEEK+ ++  HSEKLA+ FGL+  
Sbjct: 602 RHKQSNEIYAKLDEVVSKLKLAGYVPDCGSVLVDVEEEEKKDLVLWHSEKLALCFGLMNE 661

Query: 730 EPGTE------IRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDY 783
           E   E      IRI+KNLRVC DCH   K +SKV  R I+VRD  RFH +K G+CSC DY
Sbjct: 662 EKEEEKDSCGVIRIVKNLRVCEDCHLFFKLVSKVYEREIIVRDRTRFHCYKNGLCSCRDY 721

Query: 784 W 784
           W
Sbjct: 722 W 722



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 128/517 (24%), Positives = 230/517 (44%), Gaps = 36/517 (6%)

Query: 10  NLFLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPK 69
           N  L  L   K+ + + Q HA I+     + L++        S      YA  +F SIP 
Sbjct: 13  NTILEKLSFCKSLNHIKQLHAHILRTVINHKLNSFLFNLSVSSSSINLSYALNVFSSIPS 72

Query: 70  P-DLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGV 128
           P +  +FN  +R  S +  P+++I FY  +R +     D F++  +L A S       G+
Sbjct: 73  PPESIVFNPFLRDLSRSSEPRATILFYQRIR-HVGGRLDQFSFLPILKAVSKVSALFEGM 131

Query: 129 LLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNC 188
            LHG A       D FV    +D+Y     +  AR VFD+M  +D V WN+MI    +  
Sbjct: 132 ELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFG 191

Query: 189 CFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQ--------------- 233
              ++  +F +M ++     D   +  ++ A      +R    I                
Sbjct: 192 LVDEAFKLFEEM-KDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLL 250

Query: 234 -----------CLGLKLGFH-----DHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLI 277
                      C+ +   F       +++V T +VS YSKCG ++ A+++F    + DL+
Sbjct: 251 TALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLV 310

Query: 278 SCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFC 337
               MIS Y  +   + +LR+F ++  S  + +  ++  +I      G L     +HS  
Sbjct: 311 CWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCI 370

Query: 338 LKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAI 397
             +G+ S  S+  AL  +Y++   ++A R +F++   +++ SW++MI   + +G   +A+
Sbjct: 371 HVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDAL 430

Query: 398 SLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVH-ELVKSRNFESNIYVSTALIDM 456
           SLF  M+   V PN VT   +L  C+  G +  GK +   +    N    +     ++D+
Sbjct: 431 SLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDL 490

Query: 457 YAKCGNIVEARELFDLMSHKSEVT-WNTMISGYGLHG 492
           + +   + EA E+ + M   S V  W +++S   +HG
Sbjct: 491 FGRANLLREALEVIESMPVASNVVIWGSLMSACRIHG 527


>gi|225456313|ref|XP_002280013.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
           chloroplastic [Vitis vinifera]
          Length = 704

 Score =  441 bits (1133), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 231/595 (38%), Positives = 357/595 (60%), Gaps = 1/595 (0%)

Query: 190 FQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLT 249
           + +++ +F  +  NG   +DS +  A++ A   ++ +R   ++    +  G     Y+  
Sbjct: 111 YHEALELFEILELNGAYDMDSETYDALVSACIGLKSIRGVKKVFNYMINSGLDPDEYLRN 170

Query: 250 GLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERV 309
            ++  + KCG +  A  LF ++   +++S N +I G    G    + RLF  +       
Sbjct: 171 RVLLMHVKCGMMIDARRLFDEMPEKNILSWNTIIGGLVDAGDYFEAFRLFLMMWQDFSDA 230

Query: 310 NSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLF 369
            S   V +I      G +     +HS  LK+G+  +  V  AL  +YS+   +E A+ +F
Sbjct: 231 GSRMFVTMIRASAGLGLIFAGRQLHSCSLKTGVGGDVFVACALIDMYSKCGSIEDAQCVF 290

Query: 370 DESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAIS 429
           D+  EK+   WN++IAGY  +G +EEA+S++ EM+ S V  +  T S I+  CA+L ++ 
Sbjct: 291 DQMPEKTTVGWNSIIAGYALHGYSEEALSMYYEMRDSGVKIDNFTFSIIIRICARLASLE 350

Query: 430 LGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYG 489
             K  H  +    F  +I  +TAL+D+Y+K G I +A+ +FD+M HK+ ++WN +I+GYG
Sbjct: 351 HAKQAHAGLVRHGFGLDIVANTALVDLYSKWGRIEDAKHVFDMMPHKNVISWNALIAGYG 410

Query: 490 LHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLA 549
            HG G+EA+++F  MLH G+ P+ VTFL+VL ACS++GL   G EIF+SM  DH  KP A
Sbjct: 411 NHGRGVEAVEMFERMLHEGMVPNHVTFLAVLSACSYSGLSDRGWEIFESMSRDHKIKPRA 470

Query: 550 EHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFE 609
            HYACM+++LGR G L++A   IK    +P   +W ALL AC +HK+  L + A+EKL+ 
Sbjct: 471 MHYACMIELLGREGLLDEAFALIKDAPFKPTVNMWAALLTACRVHKNFELGKFAAEKLYG 530

Query: 610 LDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQ 669
           + PE +  +V+L NIY+      +AA V Q +K+R L   P C+ IE+   P+ F SGD+
Sbjct: 531 MGPEKLSNYVVLLNIYNRSGRLEEAAAVIQTLKRRGLRMLPACSWIEIKKQPYGFISGDK 590

Query: 670 LHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIAT 729
            H QS  IY  L++L  ++ + G+  +    L DV+E+E+ +++  HSEKLAIAFGLI T
Sbjct: 591 CHAQSKEIYQKLDELMLEISKHGYVPQDKFLLPDVDEQEERVLL-YHSEKLAIAFGLINT 649

Query: 730 EPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
              T ++I+++ R+C DCH+A K I+ VT R IVVRDA+RFHHFK G CSCGDYW
Sbjct: 650 SDWTPLQIVQSHRICGDCHSAIKLIALVTRREIVVRDASRFHHFKDGSCSCGDYW 704



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 117/452 (25%), Positives = 220/452 (48%), Gaps = 20/452 (4%)

Query: 98  LRKNTALTPDNFTYSFVLSAASACCDRSI-GVL-LHGHAIVSGYGSDLFVGAALVDLYFK 155
           L  N A   D+ TY  ++SA      +SI GV  +  + I SG   D ++   ++ ++ K
Sbjct: 121 LELNGAYDMDSETYDALVSACIGL--KSIRGVKKVFNYMINSGLDPDEYLRNRVLLMHVK 178

Query: 156 FSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLD-----S 210
              +  AR++FD+MPEK+ + WN++I GL+    + ++  +F  M      W D     S
Sbjct: 179 CGMMIDARRLFDEMPEKNILSWNTIIGGLVDAGDYFEAFRLFLMM------WQDFSDAGS 232

Query: 211 TSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRD 270
                ++ A A +  +  G ++    LK G    V+V   L+  YSKCG +E A+ +F  
Sbjct: 233 RMFVTMIRASAGLGLIFAGRQLHSCSLKTGVGGDVFVACALIDMYSKCGSIEDAQCVFDQ 292

Query: 271 IVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLT 330
           +     +  N++I+GY  +G +E +L ++ ++  S  ++++ T   +I +      L   
Sbjct: 293 MPEKTTVGWNSIIAGYALHGYSEEALSMYYEMRDSGVKIDNFTFSIIIRICARLASLEHA 352

Query: 331 NCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQN 390
              H+  ++ G   +    TAL  +YS+   +E A+ +FD    K++ SWNA+IAGY  +
Sbjct: 353 KQAHAGLVRHGFGLDIVANTALVDLYSKWGRIEDAKHVFDMMPHKNVISWNALIAGYGNH 412

Query: 391 GLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHE-LVKSRNFESNIYV 449
           G   EA+ +F+ M    + PN VT  ++LSAC+  G    G  + E + +    +     
Sbjct: 413 GRGVEAVEMFERMLHEGMVPNHVTFLAVLSACSYSGLSDRGWEIFESMSRDHKIKPRAMH 472

Query: 450 STALIDMYAKCGNIVEARELFDLMSHKSEVT-WNTMISGYGLHGHGLEALQLFSEMLHSG 508
              +I++  + G + EA  L      K  V  W  +++   +H +  E  +  +E L+ G
Sbjct: 473 YACMIELLGREGLLDEAFALIKDAPFKPTVNMWAALLTACRVHKN-FELGKFAAEKLY-G 530

Query: 509 IRPSGVT-FLSVLYACSHAGLVREGDEIFQSM 539
           + P  ++ ++ +L   + +G + E   + Q++
Sbjct: 531 MGPEKLSNYVVLLNIYNRSGRLEEAAAVIQTL 562



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 45/178 (25%), Positives = 86/178 (48%), Gaps = 1/178 (0%)

Query: 27  QTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNE 86
           Q H+  +  G   D+     L    S   +   A+ +F  +P+     +N II G++ + 
Sbjct: 253 QLHSCSLKTGVGGDVFVACALIDMYSKCGSIEDAQCVFDQMPEKTTVGWNSIIAGYALHG 312

Query: 87  MPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVG 146
             + ++  Y  +R ++ +  DNFT+S ++   +           H   +  G+G D+   
Sbjct: 313 YSEEALSMYYEMR-DSGVKIDNFTFSIIIRICARLASLEHAKQAHAGLVRHGFGLDIVAN 371

Query: 147 AALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNG 204
            ALVDLY K+  ++ A+ VFD MP K+ + WN++I+G   +    +++ +F  M+  G
Sbjct: 372 TALVDLYSKWGRIEDAKHVFDMMPHKNVISWNALIAGYGNHGRGVEAVEMFERMLHEG 429


>gi|356502620|ref|XP_003520116.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Glycine max]
          Length = 785

 Score =  441 bits (1133), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 266/782 (34%), Positives = 408/782 (52%), Gaps = 103/782 (13%)

Query: 105 TPDNFTYS----FVLSAASACCDRSIGVLLHGHAIVSGYGS-DLFVGAALVDLYFK---- 155
           TP+  ++S     +L +A    D  IG  +H   I  G     +F+   L++LY K    
Sbjct: 5   TPNPPSHSDACVHLLQSAIKSRDPFIGRCIHARIIKHGLRYLGVFLTNNLLNLYVKTGSS 64

Query: 156 ---------------FSW------------VKSARKVFDKMPEKDTVLWNSMISGLMKNC 188
                          FSW            + SAR+VFD++P+ D+V W +MI G     
Sbjct: 65  SDAHRLFDEMPLKTTFSWNTILSAHAKAGNLDSARRVFDEIPQPDSVSWTTMIVGYNHLG 124

Query: 189 CFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVL 248
            F+ ++  F  MV +G +    T    VL + A  Q L +G ++    +KLG    V V 
Sbjct: 125 LFKSAVHAFLRMVSSGISPTQFT-FTNVLASCAAAQALDVGKKVHSFVVKLGQSGVVPVA 183

Query: 249 TGLVSFYSKCGEVERAEL-------------------------------LFRDIVRPDLI 277
             L++ Y+KCG+   A++                               LF  +  PD++
Sbjct: 184 NSLLNMYAKCGDSVMAKVVFDRMRLKDTSTWNTMISMHMQFCQFDLALALFDQMTDPDIV 243

Query: 278 SCNAMISGYTCNGKTESSLRLFRQLLASAE-RVNSSTIVGLIPVFYPFGHLHLTNCIH-- 334
           S N++I+GY   G    +L  F  +L S+  + +  T+  ++        L L   IH  
Sbjct: 244 SWNSIITGYCHQGYDIRALETFSFMLKSSSLKPDKFTLGSVLSACANRESLKLGKQIHAH 303

Query: 335 -----------------SFCLKSGIVS--------------NSSVLTALSTVYSRLNEME 363
                            S   KSG V               N    T+L   Y ++ +++
Sbjct: 304 IVRADVDIAGAVGNALISMYAKSGAVEVAHRIVEITGTPSLNVIAFTSLLDGYFKIGDID 363

Query: 364 AARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACA 423
            AR +FD    + + +W AMI GY QNGL  +A+ LF+ M      PN  T++++LS  +
Sbjct: 364 PARAIFDSLKHRDVVAWTAMIVGYAQNGLISDALVLFRLMIREGPKPNNYTLAAVLSVIS 423

Query: 424 QLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFD-LMSHKSEVTWN 482
            L ++  GK +H +       S++ V  ALI MY++ G+I +AR++F+ + S++  +TW 
Sbjct: 424 SLASLDHGKQLHAVAIRLEEVSSVSVGNALITMYSRSGSIKDARKIFNHICSYRDTLTWT 483

Query: 483 TMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHD 542
           +MI     HG G EA++LF +ML   ++P  +T++ VL AC+H GLV +G   F  M + 
Sbjct: 484 SMILSLAQHGLGNEAIELFEKMLRINLKPDHITYVGVLSACTHVGLVEQGKSYFNLMKNV 543

Query: 543 HGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARV 602
           H  +P + HYACM+D+LGRAG LE+A  FI+ + +EP    WG+LL +C +HK  +LA+V
Sbjct: 544 HNIEPTSSHYACMIDLLGRAGLLEEAYNFIRNMPIEPDVVAWGSLLSSCRVHKYVDLAKV 603

Query: 603 ASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPH 662
           A+EKL  +DP N G ++ L+N  SA   +  AA VR+ +K + + K  G + +++    H
Sbjct: 604 AAEKLLLIDPNNSGAYLALANTLSACGKWEDAAKVRKSMKDKAVKKEQGFSWVQIKNKVH 663

Query: 663 VFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAI 722
           +F   D LHPQ  AIY M+ K+  ++++ GF  +T + LHD+E+E KE +++ HSEKLAI
Sbjct: 664 IFGVEDALHPQRDAIYCMISKIWKEIKKMGFIPDTNSVLHDLEQEVKEQILRHHSEKLAI 723

Query: 723 AFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGD 782
           AF LI T   T +RI+KNLRVC DCH+A ++IS +  R I+VRDA RFHHFK G CSC D
Sbjct: 724 AFALINTPKHTTVRIMKNLRVCNDCHSAIRYISLLVEREIIVRDATRFHHFKDGSCSCQD 783

Query: 783 YW 784
           YW
Sbjct: 784 YW 785



 Score =  162 bits (410), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 128/501 (25%), Positives = 228/501 (45%), Gaps = 68/501 (13%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           AR +F  IP+PD   +  +I G+++  + KS++  +  +  ++ ++P  FT++ VL++ +
Sbjct: 98  ARRVFDEIPQPDSVSWTTMIVGYNHLGLFKSAVHAFLRM-VSSGISPTQFTFTNVLASCA 156

Query: 120 ACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNS 179
           A     +G  +H   +  G    + V  +L+++Y K      A+ VFD+M  KDT  WN+
Sbjct: 157 AAQALDVGKKVHSFVVKLGQSGVVPVANSLLNMYAKCGDSVMAKVVFDRMRLKDTSTWNT 216

Query: 180 MISGLMKNCCFQDSIWVFGD-------------------------------MVRNGGTWL 208
           MIS  M+ C F  ++ +F                                 M+++     
Sbjct: 217 MISMHMQFCQFDLALALFDQMTDPDIVSWNSIITGYCHQGYDIRALETFSFMLKSSSLKP 276

Query: 209 DSTSVAAVLPAVAEVQELRLGMEIQC-------------------LGLKLGFHD------ 243
           D  ++ +VL A A  + L+LG +I                     +  K G  +      
Sbjct: 277 DKFTLGSVLSACANRESLKLGKQIHAHIVRADVDIAGAVGNALISMYAKSGAVEVAHRIV 336

Query: 244 --------HVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESS 295
                   +V   T L+  Y K G+++ A  +F  +   D+++  AMI GY  NG    +
Sbjct: 337 EITGTPSLNVIAFTSLLDGYFKIGDIDPARAIFDSLKHRDVVAWTAMIVGYAQNGLISDA 396

Query: 296 LRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTV 355
           L LFR ++    + N+ T+  ++ V      L     +H+  ++   VS+ SV  AL T+
Sbjct: 397 LVLFRLMIREGPKPNNYTLAAVLSVISSLASLDHGKQLHAVAIRLEEVSSVSVGNALITM 456

Query: 356 YSRLNEMEAARKLFDE-SSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVT 414
           YSR   ++ ARK+F+   S +   +W +MI    Q+GL  EAI LF++M    + P+ +T
Sbjct: 457 YSRSGSIKDARKIFNHICSYRDTLTWTSMILSLAQHGLGNEAIELFEKMLRINLKPDHIT 516

Query: 415 VSSILSACAQLGAISLGKWVHELVKS-RNFESNIYVSTALIDMYAKCGNIVEARELFDLM 473
              +LSAC  +G +  GK    L+K+  N E        +ID+  + G + EA      M
Sbjct: 517 YVGVLSACTHVGLVEQGKSYFNLMKNVHNIEPTSSHYACMIDLLGRAGLLEEAYNFIRNM 576

Query: 474 SHKSEVT-WNTMISGYGLHGH 493
             + +V  W +++S   +H +
Sbjct: 577 PIEPDVVAWGSLLSSCRVHKY 597



 Score =  110 bits (276), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 109/455 (23%), Positives = 194/455 (42%), Gaps = 75/455 (16%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           A ALF  +  PD+  +N II G+ +      ++  ++ + K+++L PD FT   VLSA +
Sbjct: 230 ALALFDQMTDPDIVSWNSIITGYCHQGYDIRALETFSFMLKSSSLKPDKFTLGSVLSACA 289

Query: 120 ACCDRSIGVLLHGH--------------AIVSGYGS-------------------DLFVG 146
                 +G  +H H              A++S Y                     ++   
Sbjct: 290 NRESLKLGKQIHAHIVRADVDIAGAVGNALISMYAKSGAVEVAHRIVEITGTPSLNVIAF 349

Query: 147 AALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGT 206
            +L+D YFK   +  AR +FD +  +D V W +MI G  +N    D++ +F  M+R G  
Sbjct: 350 TSLLDGYFKIGDIDPARAIFDSLKHRDVVAWTAMIVGYAQNGLISDALVLFRLMIREGPK 409

Query: 207 WLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAEL 266
             ++ ++AAVL  ++ +  L  G ++  + ++L     V V   L++ YS+ G ++ A  
Sbjct: 410 -PNNYTLAAVLSVISSLASLDHGKQLHAVAIRLEEVSSVSVGNALITMYSRSGSIKDARK 468

Query: 267 LFRDIVR-PDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFG 325
           +F  I    D ++  +MI     +G    ++ LF ++L    + +  T VG+        
Sbjct: 469 IFNHICSYRDTLTWTSMILSLAQHGLGNEAIELFEKMLRINLKPDHITYVGV-------- 520

Query: 326 HLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIA 385
              L+ C H   ++ G               S  N M+    +     E + + +  MI 
Sbjct: 521 ---LSACTHVGLVEQG--------------KSYFNLMKNVHNI-----EPTSSHYACMID 558

Query: 386 GYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHE---LVKSRN 442
              + GL EEA +  + M    + P+ V   S+LS+C     + L K   E   L+   N
Sbjct: 559 LLGRAGLLEEAYNFIRNM---PIEPDVVAWGSLLSSCRVHKYVDLAKVAAEKLLLIDPNN 615

Query: 443 FESNIYVSTALIDMYAKCGNIVEARELFDLMSHKS 477
             S  Y+  AL +  + CG   +A ++   M  K+
Sbjct: 616 --SGAYL--ALANTLSACGKWEDAAKVRKSMKDKA 646


>gi|75273443|sp|Q9LIQ7.1|PP252_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g24000, mitochondrial; Flags: Precursor
 gi|9294669|dbj|BAB03018.1| unnamed protein product [Arabidopsis thaliana]
          Length = 633

 Score =  441 bits (1133), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 219/544 (40%), Positives = 331/544 (60%), Gaps = 1/544 (0%)

Query: 241 FHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFR 300
           F   + +   L++ Y+KCG +E A  +F  + + D ++   +ISGY+ + +   +L  F 
Sbjct: 91  FRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFN 150

Query: 301 QLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLN 360
           Q+L      N  T+  +I            + +H FC+K G  SN  V +AL  +Y+R  
Sbjct: 151 QMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYG 210

Query: 361 EMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILS 420
            M+ A+ +FD    ++  SWNA+IAG+ +   TE+A+ LFQ M      P+  + +S+  
Sbjct: 211 LMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFG 270

Query: 421 ACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVT 480
           AC+  G +  GKWVH  +     +   +    L+DMYAK G+I +AR++FD ++ +  V+
Sbjct: 271 ACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVS 330

Query: 481 WNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMI 540
           WN++++ Y  HG G EA+  F EM   GIRP+ ++FLSVL ACSH+GL+ EG   ++ M 
Sbjct: 331 WNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMK 390

Query: 541 HDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLA 600
            D G  P A HY  +VD+LGRAG L +AL FI+ + +EP  A+W ALL AC +HK+T L 
Sbjct: 391 KD-GIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELG 449

Query: 601 RVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGT 660
             A+E +FELDP++ G HV+L NIY++   +  AA VR+ +K+  + K P C+ +E+   
Sbjct: 450 AYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVEIENA 509

Query: 661 PHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKL 720
            H+F + D+ HPQ   I    E++  K++E G+  +T   +  V+++E+E+ ++ HSEK+
Sbjct: 510 IHMFVANDERHPQREEIARKWEEVLAKIKELGYVPDTSHVIVHVDQQEREVNLQYHSEKI 569

Query: 721 AIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSC 780
           A+AF L+ T PG+ I I KN+RVC DCHTA K  SKV GR I+VRD NRFHHFK G CSC
Sbjct: 570 ALAFALLNTPPGSTIHIKKNIRVCGDCHTAIKLASKVVGREIIVRDTNRFHHFKDGNCSC 629

Query: 781 GDYW 784
            DYW
Sbjct: 630 KDYW 633



 Score =  172 bits (436), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 97/366 (26%), Positives = 194/366 (53%), Gaps = 2/366 (0%)

Query: 127 GVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMK 186
           G ++H H + S +  D+ +G  L+++Y K   ++ ARKVF+KMP++D V W ++ISG  +
Sbjct: 79  GRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQ 138

Query: 187 NCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVY 246
           +    D++  F  M+R G +  +  ++++V+ A A  +    G ++    +K GF  +V+
Sbjct: 139 HDRPCDALLFFNQMLRFGYS-PNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVH 197

Query: 247 VLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASA 306
           V + L+  Y++ G ++ A+L+F  +   + +S NA+I+G+     TE +L LF+ +L   
Sbjct: 198 VGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDG 257

Query: 307 ERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAAR 366
            R +  +   L       G L     +H++ +KSG    +     L  +Y++   +  AR
Sbjct: 258 FRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDAR 317

Query: 367 KLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLG 426
           K+FD  +++ + SWN+++  Y Q+G  +EA+  F+EM+   + PN ++  S+L+AC+  G
Sbjct: 318 KIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSG 377

Query: 427 AISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMS-HKSEVTWNTMI 485
            +  G   +EL+K        +    ++D+  + G++  A    + M    +   W  ++
Sbjct: 378 LLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALL 437

Query: 486 SGYGLH 491
           +   +H
Sbjct: 438 NACRMH 443



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 75/262 (28%), Positives = 139/262 (53%), Gaps = 2/262 (0%)

Query: 333 IHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGL 392
           +H+  L+S    +  +   L  +Y++   +E ARK+F++  ++   +W  +I+GY+Q+  
Sbjct: 82  VHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDR 141

Query: 393 TEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTA 452
             +A+  F +M     +PN  T+SS++ A A       G  +H       F+SN++V +A
Sbjct: 142 PCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSA 201

Query: 453 LIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPS 512
           L+D+Y + G + +A+ +FD +  +++V+WN +I+G+       +AL+LF  ML  G RPS
Sbjct: 202 LLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPS 261

Query: 513 GVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFI 572
             ++ S+  ACS  G + +G  +   MI   G K +A     ++D+  ++G +  A +  
Sbjct: 262 HFSYASLFGACSSTGFLEQGKWVHAYMIKS-GEKLVAFAGNTLLDMYAKSGSIHDARKIF 320

Query: 573 KGLAVEPGPAVWGALLGACMIH 594
             LA +     W +LL A   H
Sbjct: 321 DRLA-KRDVVSWNSLLTAYAQH 341



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 95/397 (23%), Positives = 184/397 (46%), Gaps = 14/397 (3%)

Query: 6   PQSRNLFLSLLKGAKTQSQLTQ---THAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARA 62
           P  R  + +LLK       L Q    HA I+   F++D+     L +  +   +   AR 
Sbjct: 57  PADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARK 116

Query: 63  LFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASA-- 120
           +F  +P+ D   +  +I G+S ++ P  ++ F+  + +    +P+ FT S V+ AA+A  
Sbjct: 117 VFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLR-FGYSPNEFTLSSVIKAAAAER 175

Query: 121 --CCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWN 178
             CC    G  LHG  +  G+ S++ VG+AL+DLY ++  +  A+ VFD +  ++ V WN
Sbjct: 176 RGCC----GHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWN 231

Query: 179 SMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLK 238
           ++I+G  +    + ++ +F  M+R+G       S A++  A +    L  G  +    +K
Sbjct: 232 ALIAGHARRSGTEKALELFQGMLRDGFR-PSHFSYASLFGACSSTGFLEQGKWVHAYMIK 290

Query: 239 LGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRL 298
            G     +    L+  Y+K G +  A  +F  + + D++S N++++ Y  +G  + ++  
Sbjct: 291 SGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWW 350

Query: 299 FRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSR 358
           F ++     R N  + + ++      G L      +    K GIV  +     +  +  R
Sbjct: 351 FEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGR 410

Query: 359 LNEMEAARKLFDESS-EKSLASWNAMIAGYTQNGLTE 394
             ++  A +  +E   E + A W A++     +  TE
Sbjct: 411 AGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTE 447



 Score = 83.2 bits (204), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 64/227 (28%), Positives = 99/227 (43%), Gaps = 39/227 (17%)

Query: 401 QEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKC 460
            +++ S +  +    +++L  C     +  G+ VH  +    F  +I +   L++MYAKC
Sbjct: 49  NDLEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKC 108

Query: 461 GNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVL 520
           G++ EAR++F+ M  +  VTW T+ISGY  H    +AL  F++ML  G  P+  T  SV+
Sbjct: 109 GSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVI 168

Query: 521 YACS-----------HAGLVREGDEIFQSMIH-DHGFKPLAEHYACMVD----------- 557
            A +           H   V+ G   F S +H       L   Y  M D           
Sbjct: 169 KAAAAERRGCCGHQLHGFCVKCG---FDSNVHVGSALLDLYTRYGLMDDAQLVFDALESR 225

Query: 558 --------ILGRAGQ--LEKALEFIKGL---AVEPGPAVWGALLGAC 591
                   I G A +   EKALE  +G+      P    + +L GAC
Sbjct: 226 NDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGAC 272


>gi|414585731|tpg|DAA36302.1| TPA: hypothetical protein ZEAMMB73_369042 [Zea mays]
          Length = 865

 Score =  441 bits (1133), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 275/823 (33%), Positives = 425/823 (51%), Gaps = 92/823 (11%)

Query: 29  HAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNEMP 88
           H  +I H     L+   KL  RLSD      A  LF  +P  D+  +N ++ G+  +   
Sbjct: 68  HPNVITHNVM--LNGYAKLG-RLSD------AVELFGRMPARDVASWNTLMSGYFQSRQY 118

Query: 89  KSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGS------- 141
             S+  +  + ++    P+ FT +  + +  A    S+ + L   A+V  + S       
Sbjct: 119 LVSLETFLSMHRSGDSWPNAFTLACAMKSCGALGWHSLALQLL--AMVQKFDSQDDSEVA 176

Query: 142 ----DLFVGAALVDL----------------------YFKFSWVKSARKVFDKMPEKDTV 175
               D+FV    VDL                      Y K   V  A ++FD MPE+D V
Sbjct: 177 AALVDMFVRCGAVDLASRLFVRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVV 236

Query: 176 LWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCL 235
            WN M+S L ++   ++++ +  DM ++ G  LDST+  + L A A +  LR G ++   
Sbjct: 237 SWNMMVSALSQSGRVREALDMVVDM-QSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQ 295

Query: 236 GLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESS 295
            ++   H   YV + LV  Y+K G  + A+ +F  +   + ++   +ISG+   G    S
Sbjct: 296 VIRNLPHIDPYVASALVELYAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTES 355

Query: 296 LRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSG-----IVSNSSV-- 348
           + LF Q+ A    ++   +  LI        L L   +HS CLKSG     +VSNS +  
Sbjct: 356 VELFNQMRAELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISM 415

Query: 349 ------------------------LTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMI 384
                                    T++ T YS++  +  AR+ FD  SEK++ +WNAM+
Sbjct: 416 YAKCDNLQSAEAIFRFMNEKDIVSWTSMITAYSQVGNVAKAREFFDGMSEKNVITWNAML 475

Query: 385 AGYTQNGLTEEAISLFQEMQASK-VAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNF 443
             Y Q+G  E+ + +++ M + + V P+ VT  ++   CA LGA  LG  +         
Sbjct: 476 GAYIQHGAEEDGLRMYKVMLSEEYVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGL 535

Query: 444 ESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSE 503
             +  V+ A+I MY+KCG I+EAR++FD ++ K  V+WN MI+GY  HG G +A+++F +
Sbjct: 536 IIDTSVANAVITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDD 595

Query: 504 MLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAG 563
           +L  G +P  +++++VL  CSH+GLV+EG   F  M   H   P  EH++CMVD+LGRAG
Sbjct: 596 ILKRGAKPDYISYVAVLSGCSHSGLVQEGKFYFDMMKRAHNISPGLEHFSCMVDLLGRAG 655

Query: 564 QLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSN 623
            L +A + I  + ++P   VWGALL AC IH +  LA +A++ +FELD  + G ++L++ 
Sbjct: 656 HLTEAKDLIDDMPMKPTAEVWGALLSACKIHGNNELAELAAKHVFELDSPDSGSYMLMAK 715

Query: 624 IYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEK 683
           IY+       +A +R++++ + + K PG + +EV    HVF + D  HPQ  AI   L++
Sbjct: 716 IYADAGKSDDSAQIRKLMRDKGIKKNPGYSWMEVDNKVHVFKADDVSHPQVLAIRKKLDE 775

Query: 684 LNGKMREAGF--QTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNL 741
           L  K+   G+     T + +H             HSEKLA+AFGL+       I I+KNL
Sbjct: 776 LMEKIARLGYVRTDSTRSEIH-------------HSEKLAVAFGLMTLPTWMPIHIMKNL 822

Query: 742 RVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           R+C DCHT  K IS VTGR  V+RDA RFHHF GG CSCGDYW
Sbjct: 823 RICGDCHTVIKLISTVTGREFVIRDAVRFHHFNGGSCSCGDYW 865



 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 92/416 (22%), Positives = 173/416 (41%), Gaps = 60/416 (14%)

Query: 27  QTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCY--ARALFFSIPKPDLFLFNVIIRGFSN 84
           Q HAQ+I +    D    + L    +  K+ C+  A+ +F S+   +   + V+I GF  
Sbjct: 291 QLHAQVIRNLPHIDPYVASALVELYA--KSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQ 348

Query: 85  NEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLF 144
                 S+  +  +R    +T D F  + ++S   +  D  +G  LH   + SG    + 
Sbjct: 349 YGCFTESVELFNQMRAEL-MTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVV 407

Query: 145 VGAALVDLY------------FKF-------SW------------VKSARKVFDKMPEKD 173
           V  +L+ +Y            F+F       SW            V  AR+ FD M EK+
Sbjct: 408 VSNSLISMYAKCDNLQSAEAIFRFMNEKDIVSWTSMITAYSQVGNVAKAREFFDGMSEKN 467

Query: 174 TVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQ 233
            + WN+M+   +++   +D + ++  M+       D  +   +    A++   +LG +I 
Sbjct: 468 VITWNAMLGAYIQHGAEEDGLRMYKVMLSEEYVRPDWVTYVTLFKGCADLGANKLGDQII 527

Query: 234 CLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTE 293
              +K+G      V   +++ YSKCG +  A  +F  +   D++S NAMI+GY+ +G  +
Sbjct: 528 GRTVKVGLIIDTSVANAVITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGYSQHGMGK 587

Query: 294 SSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSG------------ 341
            ++ +F  +L    + +  + V +           L+ C HS  ++ G            
Sbjct: 588 QAIEIFDDILKRGAKPDYISYVAV-----------LSGCSHSGLVQEGKFYFDMMKRAHN 636

Query: 342 IVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLAS-WNAMIAGYTQNGLTEEA 396
           I       + +  +  R   +  A+ L D+   K  A  W A+++    +G  E A
Sbjct: 637 ISPGLEHFSCMVDLLGRAGHLTEAKDLIDDMPMKPTAEVWGALLSACKIHGNNELA 692


>gi|224069701|ref|XP_002303023.1| predicted protein [Populus trichocarpa]
 gi|222844749|gb|EEE82296.1| predicted protein [Populus trichocarpa]
          Length = 621

 Score =  441 bits (1133), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 227/561 (40%), Positives = 324/561 (57%), Gaps = 18/561 (3%)

Query: 242 HDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQ 301
           H   +V+  L+   S    +  A  +F     P++    A+I G   +      + L+ Q
Sbjct: 61  HQDPFVVFELLRVCSNLNSIGYASKIFSHTQNPNVYLYTALIDGLVLSCYYTDGIHLYYQ 120

Query: 302 LLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNE 361
           ++ S+   +S  +  ++        L     +HS  LK G+ SN S+   L  +Y +   
Sbjct: 121 MINSSLVPDSYAVTSVLKACGCHLALKEGREVHSQVLKLGLSSNRSIRIKLIELYGKCGA 180

Query: 362 MEAARKLFDESSEKSLAS------------------WNAMIAGYTQNGLTEEAISLFQEM 403
            E AR++FDE  E+ + +                  W AMI G  +NG +  A+ +F+ M
Sbjct: 181 FEDARRVFDEMPERDVVASTVMINYYFDHGIKDTVCWTAMIDGLVRNGESNRALEVFRNM 240

Query: 404 QASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNI 463
           Q   V PN VT+  +LSAC++LGA+ LG+WV   +     E N +V  ALI+MY++CG+I
Sbjct: 241 QREDVMPNEVTIVCVLSACSELGALQLGRWVRSYMDKHRIELNHFVGGALINMYSRCGDI 300

Query: 464 VEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYAC 523
            EA+ +F+ M  K+ +T+N+MI G+ LHG  +EA++LF  ++  G  PS VTF+ VL AC
Sbjct: 301 DEAQRVFEQMKEKNVITYNSMIMGFALHGKSVEAVELFRGLIKQGFTPSSVTFVGVLNAC 360

Query: 524 SHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAV 583
           SH GL   G EIF SM  D+G +P  EHY CMVD+LGR G+LE+A  FI+ + V P   +
Sbjct: 361 SHGGLAELGFEIFHSMAKDYGIEPQIEHYGCMVDLLGRLGRLEEAYSFIRMMKVAPDHVM 420

Query: 584 WGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKK 643
            GALL AC IH +  LA   ++ L      + G ++LLSN YS+   + +AA VR  +++
Sbjct: 421 LGALLSACKIHGNLELAERVAKSLVACKNADSGTYILLSNAYSSSGKWKEAAEVRTNMRE 480

Query: 644 RKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHD 703
             + K PGC+ IEV    H F  GD  HPQ   IY  LE+LN  +R  G+   T   LHD
Sbjct: 481 EGIEKEPGCSSIEVNNEIHEFLLGDLRHPQKEKIYKKLEELNQILRLEGYTPATEVVLHD 540

Query: 704 VEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIV 763
           +E+ EKE  + +HSE+LAI +GLI+T+P T +R++KNLRVC DCH   K IS +T R IV
Sbjct: 541 IEKSEKEWALAIHSERLAICYGLISTKPLTTLRVVKNLRVCNDCHLTIKLISNITRRKIV 600

Query: 764 VRDANRFHHFKGGVCSCGDYW 784
           VRD NRFHHF+ GVCSCGDYW
Sbjct: 601 VRDRNRFHHFENGVCSCGDYW 621



 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 132/490 (26%), Positives = 224/490 (45%), Gaps = 68/490 (13%)

Query: 5   TPQSRNLFLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALF 64
           TP  R  F+SLL+  K  +Q+   +A+II +    D   V +L    S+  +  YA  +F
Sbjct: 28  TPNRRRHFISLLQNCKHNNQIPPIYAKIIRNHHHQDPFVVFELLRVCSNLNSIGYASKIF 87

Query: 65  FSIPKPDLFLFNVIIRGFSNNEMPKSSICFYT---HLRK---NTALTPDNFTYSFVLSAA 118
                P+++L+  +I G   +       C+YT   HL     N++L PD++  + VL A 
Sbjct: 88  SHTQNPNVYLYTALIDGLVLS-------CYYTDGIHLYYQMINSSLVPDSYAVTSVLKAC 140

Query: 119 SACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPE------- 171
                   G  +H   +  G  S+  +   L++LY K    + AR+VFD+MPE       
Sbjct: 141 GCHLALKEGREVHSQVLKLGLSSNRSIRIKLIELYGKCGAFEDARRVFDEMPERDVVAST 200

Query: 172 -----------KDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAV 220
                      KDTV W +MI GL++N     ++ VF +M R      +  ++  VL A 
Sbjct: 201 VMINYYFDHGIKDTVCWTAMIDGLVRNGESNRALEVFRNMQRED-VMPNEVTIVCVLSAC 259

Query: 221 AEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCN 280
           +E+  L+LG  ++    K     + +V   L++ YS+CG+++ A+ +F  +   ++I+ N
Sbjct: 260 SELGALQLGRWVRSYMDKHRIELNHFVGGALINMYSRCGDIDEAQRVFEQMKEKNVITYN 319

Query: 281 AMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKS 340
           +MI G+  +GK+  ++ LFR L+      +S T VG+           L  C H    + 
Sbjct: 320 SMIMGFALHGKSVEAVELFRGLIKQGFTPSSVTFVGV-----------LNACSHGGLAEL 368

Query: 341 GIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLF 400
           G      +  +++                D   E  +  +  M+    + G  EEA S  
Sbjct: 369 GF----EIFHSMAK---------------DYGIEPQIEHYGCMVDLLGRLGRLEEAYSFI 409

Query: 401 QEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHE-LVKSRNFESNIYVSTALIDMYAK 459
           + M   KVAP+ V + ++LSAC   G + L + V + LV  +N +S  Y+   L + Y+ 
Sbjct: 410 RMM---KVAPDHVMLGALLSACKIHGNLELAERVAKSLVACKNADSGTYI--LLSNAYSS 464

Query: 460 CGNIVEAREL 469
            G   EA E+
Sbjct: 465 SGKWKEAAEV 474


>gi|357131283|ref|XP_003567268.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Brachypodium distachyon]
          Length = 654

 Score =  440 bits (1132), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 214/455 (47%), Positives = 305/455 (67%), Gaps = 4/455 (0%)

Query: 333 IHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGL 392
           +H+  ++ G   ++ V T L   Y++L  +  A  +F    E+++ SW+AMI  Y +N  
Sbjct: 201 VHAHAIRRGYALHTHVATTLIDCYAKLGIVRYAESVFAAMPERNVVSWSAMIGCYAKNER 260

Query: 393 TEEAISLFQEMQASK--VAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVS 450
             +AI LF++M AS   + PN +T+ S+L+ACA + A+S GK +H  +  R F+S + V 
Sbjct: 261 PADAIELFKDMMASDADLVPNSITIVSVLNACAGVNALSHGKLLHAYILRRGFDSLVSVL 320

Query: 451 TALIDMYAKCGNIVEARELFDLMSHKSEV-TWNTMISGYGLHGHGLEALQLFSEMLHSGI 509
            AL+ MY +CG +   R +F  + H+ +V +WN++ISGYG+HG G EA+Q+F EM+H G 
Sbjct: 321 NALMAMYMRCGCLEVGRHIFKWIGHRRDVVSWNSLISGYGMHGFGPEAVQVFEEMIHVGF 380

Query: 510 RPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKAL 569
            PS +TF+SVL ACSHAGLV EG  +F+SM+ ++G  P AEHYACMVD+LGRAGQL++A+
Sbjct: 381 SPSIITFISVLGACSHAGLVNEGKMLFESMV-EYGVTPRAEHYACMVDLLGRAGQLDEAM 439

Query: 570 EFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAER 629
           E I+ + +EP P VWGALLGAC IH     A +A   LF+L+P N G +VLL++IY+  +
Sbjct: 440 ELIRSMHIEPSPQVWGALLGACRIHGHVEYAEIACSHLFDLEPRNAGNYVLLADIYARAK 499

Query: 630 DYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMR 689
            + Q   +++++++  L K  GC+ IEV    H FTS D  +P    + A++ +   +M+
Sbjct: 500 LHNQVGVLKELLEEHALEKVTGCSWIEVKKKLHSFTSVDNKNPPVEQLQALIGEFVAQMK 559

Query: 690 EAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHT 749
             G+  +T   L+D+E EEKE ++  HSEKLA+AFGLI T  G  IRI KNLR+C DCH+
Sbjct: 560 NQGYVPDTGIVLYDIEGEEKERILIGHSEKLAVAFGLINTCSGEVIRITKNLRLCEDCHS 619

Query: 750 ATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
            TKFISK T R IVVRD NRFHHF+ GVCSCGDYW
Sbjct: 620 VTKFISKFTEREIVVRDVNRFHHFRDGVCSCGDYW 654



 Score =  110 bits (276), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 95/371 (25%), Positives = 171/371 (46%), Gaps = 15/371 (4%)

Query: 37  FQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYT 96
           F++D    T+L    +   A   AR +F   P  ++F++N +++  +  +    ++    
Sbjct: 104 FRSDPFLSTRLIEAYAALGALPAARQVFDETPVKNIFVWNALLKALALADHGDEALARLA 163

Query: 97  HLRKNTALTPDNFTYSFVLSA-----ASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVD 151
            + +   +  D+++Y+  L A     AS     +    +H HAI  GY     V   L+D
Sbjct: 164 DMGR-LGVPVDSYSYTHGLKACIAVSASHAPASARVREVHAHAIRRGYALHTHVATTLID 222

Query: 152 LYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWL-DS 210
            Y K   V+ A  VF  MPE++ V W++MI    KN    D+I +F DM+ +    + +S
Sbjct: 223 CYAKLGIVRYAESVFAAMPERNVVSWSAMIGCYAKNERPADAIELFKDMMASDADLVPNS 282

Query: 211 TSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRD 270
            ++ +VL A A V  L  G  +    L+ GF   V VL  L++ Y +CG +E    +F+ 
Sbjct: 283 ITIVSVLNACAGVNALSHGKLLHAYILRRGFDSLVSVLNALMAMYMRCGCLEVGRHIFKW 342

Query: 271 IV-RPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHL 329
           I  R D++S N++ISGY  +G    ++++F +++       S +I+  I V     H  L
Sbjct: 343 IGHRRDVVSWNSLISGYGMHGFGPEAVQVFEEMIHVG---FSPSIITFISVLGACSHAGL 399

Query: 330 TN---CIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESS-EKSLASWNAMIA 385
            N    +    ++ G+   +     +  +  R  +++ A +L      E S   W A++ 
Sbjct: 400 VNEGKMLFESMVEYGVTPRAEHYACMVDLLGRAGQLDEAMELIRSMHIEPSPQVWGALLG 459

Query: 386 GYTQNGLTEEA 396
               +G  E A
Sbjct: 460 ACRIHGHVEYA 470



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 48/188 (25%), Positives = 93/188 (49%), Gaps = 2/188 (1%)

Query: 19  AKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVI 78
           A   +++ + HA  I  G+       T L    +      YA ++F ++P+ ++  ++ +
Sbjct: 192 APASARVREVHAHAIRRGYALHTHVATTLIDCYAKLGIVRYAESVFAAMPERNVVSWSAM 251

Query: 79  IRGFSNNEMPKSSICFYTHLRKNTA-LTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVS 137
           I  ++ NE P  +I  +  +  + A L P++ T   VL+A +     S G LLH + +  
Sbjct: 252 IGCYAKNERPADAIELFKDMMASDADLVPNSITIVSVLNACAGVNALSHGKLLHAYILRR 311

Query: 138 GYGSDLFVGAALVDLYFKFSWVKSARKVFDKMP-EKDTVLWNSMISGLMKNCCFQDSIWV 196
           G+ S + V  AL+ +Y +   ++  R +F  +   +D V WNS+ISG   +    +++ V
Sbjct: 312 GFDSLVSVLNALMAMYMRCGCLEVGRHIFKWIGHRRDVVSWNSLISGYGMHGFGPEAVQV 371

Query: 197 FGDMVRNG 204
           F +M+  G
Sbjct: 372 FEEMIHVG 379


>gi|359494657|ref|XP_002264130.2| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
            [Vitis vinifera]
          Length = 1724

 Score =  440 bits (1132), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 256/762 (33%), Positives = 419/762 (54%), Gaps = 9/762 (1%)

Query: 27   QTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNE 86
            Q    II +GF++ +S    L    S F +   A  +F  + + D+  +N +I  ++++ 
Sbjct: 968  QVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHG 1027

Query: 87   MPKSSI-CFY--THLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDL 143
            + + S+ CF+   HL   T  T    T S +LS  S+  +   G  +HG  +  G  S++
Sbjct: 1028 LCRESLRCFHWMRHLHNETNST----TLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNV 1083

Query: 144  FVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRN 203
             +   L+ LY +    + A  VF  M E+D + WNSM++  +++    D + +  ++++ 
Sbjct: 1084 CICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMACYVQDGKCLDGLKILAELLQM 1143

Query: 204  GGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVER 263
            G   ++  + A+ L A +  + L     +  L +  GFHD + V   LV+ Y K G +  
Sbjct: 1144 GKV-MNHVTFASALAACSNPECLIESKIVHALIIVAGFHDFLIVGNALVTMYGKLGMMME 1202

Query: 264  AELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLI-PVFY 322
            A+ + + + +PD ++ NA+I G+  N +   +++ ++ +       N  T+V ++     
Sbjct: 1203 AKKVLQTMPQPDRVTWNALIGGHAENEEPNEAVKAYKLIREKGIPANYITMVSVLGACSA 1262

Query: 323  PFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNA 382
            P   L     IH+  + +G  S+  V  +L T+Y++  ++ ++  +FD    KS  +WNA
Sbjct: 1263 PDDLLKHGMPIHAHIVLTGFESDDYVKNSLITMYAKCGDLNSSNYIFDGLGNKSPITWNA 1322

Query: 383  MIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRN 442
            M+A    +G  EEA+ +F EM+   V  +  + S  L+A A L  +  G+ +H LV    
Sbjct: 1323 MVAANAHHGCGEEALKIFGEMRNVGVNLDQFSFSGGLAATANLAVLEEGQQLHGLVIKLG 1382

Query: 443  FESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFS 502
            FES+++V+ A +DMY KCG + +  ++     ++S ++WN +IS +  HG   +A + F 
Sbjct: 1383 FESDLHVTNAAMDMYGKCGEMHDVLKMLPQPINRSRLSWNILISAFARHGCFQKARETFH 1442

Query: 503  EMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRA 562
            EML  G +P  VTF+S+L AC+H GLV EG   + SM  + G  P  EH  C++D+LGR+
Sbjct: 1443 EMLKLGPKPDHVTFVSLLSACNHGGLVDEGLAYYDSMTREFGVFPGIEHCVCIIDLLGRS 1502

Query: 563  GQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLS 622
            G+L  A  FIK + V P    W +LL AC IH +  LAR  +E L ELDP +   +VL S
Sbjct: 1503 GRLSHAEGFIKEMPVPPNDLAWRSLLAACRIHGNLELARKTAEHLLELDPSDDSAYVLYS 1562

Query: 623  NIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLE 682
            N+ +    +     +R+ +    + K P C+ +++    H F  G++ HPQ++ I A L 
Sbjct: 1563 NVCATSGKWEDVENLRKEMGSNNIKKQPACSWVKLKDKVHSFGMGEKYHPQASRISAKLG 1622

Query: 683  KLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLR 742
            +L    +EAG+  +T  ALHD++EE+KE  +  HSE+LA+AFGLI T   + +RI KNLR
Sbjct: 1623 ELMKMTKEAGYVPDTSFALHDMDEEQKEYNLWNHSERLALAFGLINTPESSTLRIFKNLR 1682

Query: 743  VCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
            VC DCH+  KF+S + GR IV+RD  RFHHF GG CSCGDYW
Sbjct: 1683 VCGDCHSVYKFVSGIVGRKIVLRDPYRFHHFSGGKCSCGDYW 1724



 Score =  342 bits (876), Expect = 6e-91,   Method: Compositional matrix adjust.
 Identities = 191/556 (34%), Positives = 306/556 (55%), Gaps = 5/556 (0%)

Query: 105 TPDNFTYSFVLSAASACCDRSI---GVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKS 161
            P     S  L     C D+     G L+H H I +G+GSDL +   L+  Y K   V +
Sbjct: 24  NPTRLDPSLYLKILQLCIDKKAKKQGHLIHTHLITNGFGSDLHLNTKLIIFYVKVGDVIA 83

Query: 162 ARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVA 221
           AR VFD MPE+  V W +M+SG  +N  F+ +  +F DM R+ G   +  +  + L A  
Sbjct: 84  ARNVFDGMPERSVVSWTAMVSGYSQNGRFEKAFVLFSDM-RHCGVKANQFTYGSALRACT 142

Query: 222 EVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNA 281
            ++ L +G+++Q    K  F ++++V + LV F+SKCG++E A  LF  ++  D++S NA
Sbjct: 143 SLRCLDMGIQVQGCIQKGRFVENLFVKSALVDFHSKCGKMEDASYLFGTMMERDVVSWNA 202

Query: 282 MISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSG 341
           MI GY   G  + S  +FR +L      +  T+  ++      G L + N IH    + G
Sbjct: 203 MIGGYAVQGFADDSFCMFRSMLRGGLVPDCYTLGSVLRASAEGGGLIIANQIHGIITQLG 262

Query: 342 IVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGL-TEEAISLF 400
             S   V   L   Y++   + +A+ L     +K L S  A+I GY   G+ + +A+ LF
Sbjct: 263 YGSYDIVTGLLINAYAKNGSLRSAKDLRKGMLKKDLFSSTALITGYAHEGIYSVDALDLF 322

Query: 401 QEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKC 460
           +EM    +  + V + S+L+ CA L + +LG  +H          ++ +  ALIDMYAK 
Sbjct: 323 KEMNQMNIGMDDVILCSMLNICANLASFALGTQIHAFALKYQPSYDVAMGNALIDMYAKS 382

Query: 461 GNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVL 520
           G I +A+  FD M  K+ ++W ++ISGY  HG+G  A+ L+ +M   G +P+ VTFLS+L
Sbjct: 383 GEIEDAKRAFDEMEEKNVISWTSLISGYAKHGYGHMAVSLYKKMESKGFKPNDVTFLSLL 442

Query: 521 YACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPG 580
           +ACSH GL  EG E F +M++ +  KP AEHY+CMVD+  R G LE+A   +  + ++  
Sbjct: 443 FACSHTGLTAEGCECFNNMVNKYNIKPRAEHYSCMVDLFARQGLLEEAYNLLCKIDIKHN 502

Query: 581 PAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQV 640
            ++WGA+LGA  I+   +L + A+  LF + PEN   +V+L++IYSA   +  A  +R++
Sbjct: 503 ASLWGAILGASSIYGYMSLGKEAASNLFNMQPENSVNYVVLASIYSAAGLWDDAWKIRKL 562

Query: 641 VKKRKLAKAPGCTLIE 656
           +++R   K  G +  +
Sbjct: 563 MEERSTKKNAGYSFFQ 578



 Score =  231 bits (590), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 164/599 (27%), Positives = 296/599 (49%), Gaps = 7/599 (1%)

Query: 27   QTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNE 86
            Q H  ++  G   D+   T L H          A+ LF  +P  ++  +  ++ G+S++ 
Sbjct: 867  QVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSG 926

Query: 87   MPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVG 146
             P   +  Y  +R+   ++ +  T++ V S+     D+ +G  + GH I  G+   + V 
Sbjct: 927  NPGEVLNVYQRMRQE-GVSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVA 985

Query: 147  AALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGT 206
             +L+ ++  FS V+ A  VFD M E D + WN+MIS    +   ++S+  F  M R+   
Sbjct: 986  NSLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWM-RHLHN 1044

Query: 207  WLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAEL 266
              +ST+++++L   + V  L+ G  I  L +KLG   +V +   L++ YS+ G  E AEL
Sbjct: 1045 ETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAEL 1104

Query: 267  LFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGH 326
            +F+ +   DLIS N+M++ Y  +GK    L++  +LL   + +N  T    +        
Sbjct: 1105 VFQAMTERDLISWNSMMACYVQDGKCLDGLKILAELLQMGKVMNHVTFASALAACSNPEC 1164

Query: 327  LHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAG 386
            L  +  +H+  + +G      V  AL T+Y +L  M  A+K+     +    +WNA+I G
Sbjct: 1165 LIESKIVHALIIVAGFHDFLIVGNALVTMYGKLGMMMEAKKVLQTMPQPDRVTWNALIGG 1224

Query: 387  YTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSAC-AQLGAISLGKWVHELVKSRNFES 445
            + +N    EA+  ++ ++   +  N +T+ S+L AC A    +  G  +H  +    FES
Sbjct: 1225 HAENEEPNEAVKAYKLIREKGIPANYITMVSVLGACSAPDDLLKHGMPIHAHIVLTGFES 1284

Query: 446  NIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEML 505
            + YV  +LI MYAKCG++  +  +FD + +KS +TWN M++    HG G EAL++F EM 
Sbjct: 1285 DDYVKNSLITMYAKCGDLNSSNYIFDGLGNKSPITWNAMVAANAHHGCGEEALKIFGEMR 1344

Query: 506  HSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQL 565
            + G+     +F   L A ++  ++ EG ++   ++   GF+         +D+ G+ G++
Sbjct: 1345 NVGVNLDQFSFSGGLAATANLAVLEEGQQL-HGLVIKLGFESDLHVTNAAMDMYGKCGEM 1403

Query: 566  EKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFEL--DPENVGYHVLLS 622
               L+ +    +      W  L+ A   H     AR    ++ +L   P++V +  LLS
Sbjct: 1404 HDVLKMLP-QPINRSRLSWNILISAFARHGCFQKARETFHEMLKLGPKPDHVTFVSLLS 1461



 Score =  199 bits (505), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 154/572 (26%), Positives = 265/572 (46%), Gaps = 14/572 (2%)

Query: 29   HAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNEMP 88
            HA  I+      +     L +  S F    +AR +F  +   +   ++ ++ G+    + 
Sbjct: 767  HAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVFDEMRHRNEASWSTMLSGYVRVGLY 826

Query: 89   KSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRS-----IGVLLHGHAIVSGYGSDL 143
            + ++  +  +     + P+ F  + +++A    C RS      G  +HG  + +G   D+
Sbjct: 827  EEAVGLFCQMW-GLGVEPNGFMVASLITA----CSRSGYMADEGFQVHGFVVKTGILGDV 881

Query: 144  FVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRN 203
            +VG ALV  Y     V +A+K+F++MP+ + V W S++ G   +    + + V+  M R 
Sbjct: 882  YVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRM-RQ 940

Query: 204  GGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVER 263
             G   +  + A V  +   +++  LG ++    ++ GF D V V   L+S +S    VE 
Sbjct: 941  EGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEE 1000

Query: 264  AELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYP 323
            A  +F  +   D+IS NAMIS Y  +G    SLR F  +       NS+T+  L+ V   
Sbjct: 1001 ACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLLSVCSS 1060

Query: 324  FGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAM 383
              +L     IH   +K G+ SN  +   L T+YS     E A  +F   +E+ L SWN+M
Sbjct: 1061 VDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSM 1120

Query: 384  IAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNF 443
            +A Y Q+G   + + +  E+       N VT +S L+AC+    +   K VH L+    F
Sbjct: 1121 MACYVQDGKCLDGLKILAELLQMGKVMNHVTFASALAACSNPECLIESKIVHALIIVAGF 1180

Query: 444  ESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSE 503
               + V  AL+ MY K G ++EA+++   M     VTWN +I G+  +    EA++ +  
Sbjct: 1181 HDFLIVGNALVTMYGKLGMMMEAKKVLQTMPQPDRVTWNALIGGHAENEEPNEAVKAYKL 1240

Query: 504  MLHSGIRPSGVTFLSVLYACSHA-GLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRA 562
            +   GI  + +T +SVL ACS    L++ G  I   ++   GF+        ++ +  + 
Sbjct: 1241 IREKGIPANYITMVSVLGACSAPDDLLKHGMPIHAHIVLT-GFESDDYVKNSLITMYAKC 1299

Query: 563  GQLEKALEFIKGLAVEPGPAVWGALLGACMIH 594
            G L  +     GL     P  W A++ A   H
Sbjct: 1300 GDLNSSNYIFDGLG-NKSPITWNAMVAANAHH 1330



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 134/486 (27%), Positives = 245/486 (50%), Gaps = 7/486 (1%)

Query: 11  LFLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKP 70
           L L + K AK Q  L  TH  +I +GF +DL   TKL            AR +F  +P+ 
Sbjct: 37  LQLCIDKKAKKQGHLIHTH--LITNGFGSDLHLNTKLIIFYVKVGDVIAARNVFDGMPER 94

Query: 71  DLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLL 130
            +  +  ++ G+S N   + +   ++ +R +  +  + FTY   L A ++     +G+ +
Sbjct: 95  SVVSWTAMVSGYSQNGRFEKAFVLFSDMR-HCGVKANQFTYGSALRACTSLRCLDMGIQV 153

Query: 131 HGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCF 190
            G      +  +LFV +ALVD + K   ++ A  +F  M E+D V WN+MI G       
Sbjct: 154 QGCIQKGRFVENLFVKSALVDFHSKCGKMEDASYLFGTMMERDVVSWNAMIGGYAVQGFA 213

Query: 191 QDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTG 250
            DS  +F  M+R GG   D  ++ +VL A AE   L +  +I  +  +LG+  +  V   
Sbjct: 214 DDSFCMFRSMLR-GGLVPDCYTLGSVLRASAEGGGLIIANQIHGIITQLGYGSYDIVTGL 272

Query: 251 LVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNG-KTESSLRLFRQLLASAERV 309
           L++ Y+K G +  A+ L + +++ DL S  A+I+GY   G  +  +L LF+++      +
Sbjct: 273 LINAYAKNGSLRSAKDLRKGMLKKDLFSSTALITGYAHEGIYSVDALDLFKEMNQMNIGM 332

Query: 310 NSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLF 369
           +   +  ++ +        L   IH+F LK     + ++  AL  +Y++  E+E A++ F
Sbjct: 333 DDVILCSMLNICANLASFALGTQIHAFALKYQPSYDVAMGNALIDMYAKSGEIEDAKRAF 392

Query: 370 DESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAIS 429
           DE  EK++ SW ++I+GY ++G    A+SL+++M++    PN VT  S+L AC+  G  +
Sbjct: 393 DEMEEKNVISWTSLISGYAKHGYGHMAVSLYKKMESKGFKPNDVTFLSLLFACSHTGLTA 452

Query: 430 LG-KWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVT-WNTMISG 487
            G +  + +V   N +      + ++D++A+ G + EA  L   +  K   + W  ++  
Sbjct: 453 EGCECFNNMVNKYNIKPRAEHYSCMVDLFARQGLLEEAYNLLCKIDIKHNASLWGAILGA 512

Query: 488 YGLHGH 493
             ++G+
Sbjct: 513 SSIYGY 518



 Score =  172 bits (436), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 137/524 (26%), Positives = 256/524 (48%), Gaps = 5/524 (0%)

Query: 112  SFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPE 171
            +F L   S    +  G  LH   IV      +F    L+++Y KF  ++ AR VFD+M  
Sbjct: 748  NFPLKGFSEITSQMAGKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVFDEMRH 807

Query: 172  KDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQEL-RLGM 230
            ++   W++M+SG ++   +++++ +F  M    G   +   VA+++ A +    +   G 
Sbjct: 808  RNEASWSTMLSGYVRVGLYEEAVGLFCQM-WGLGVEPNGFMVASLITACSRSGYMADEGF 866

Query: 231  EIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNG 290
            ++    +K G    VYV T LV FY   G V  A+ LF ++   +++S  +++ GY+ +G
Sbjct: 867  QVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSG 926

Query: 291  KTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLT 350
                 L +++++       N +T   +           L   +    ++ G   + SV  
Sbjct: 927  NPGEVLNVYQRMRQEGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVAN 986

Query: 351  ALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAP 410
            +L +++S  + +E A  +FD  +E  + SWNAMI+ Y  +GL  E++  F  M+      
Sbjct: 987  SLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRHLHNET 1046

Query: 411  NPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELF 470
            N  T+SS+LS C+ +  +  G+ +H LV     +SN+ +   L+ +Y++ G   +A  +F
Sbjct: 1047 NSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVF 1106

Query: 471  DLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVR 530
              M+ +  ++WN+M++ Y   G  L+ L++ +E+L  G   + VTF S L ACS+   + 
Sbjct: 1107 QAMTERDLISWNSMMACYVQDGKCLDGLKILAELLQMGKVMNHVTFASALAACSNPECLI 1166

Query: 531  EGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGA 590
            E  +I  ++I   GF         +V + G+ G + +A + ++ +  +P    W AL+G 
Sbjct: 1167 E-SKIVHALIIVAGFHDFLIVGNALVTMYGKLGMMMEAKKVLQTMP-QPDRVTWNALIGG 1224

Query: 591  CMIHKDTNLARVASEKLFELD-PENVGYHVLLSNIYSAERDYLQ 633
               +++ N A  A + + E   P N    V +    SA  D L+
Sbjct: 1225 HAENEEPNEAVKAYKLIREKGIPANYITMVSVLGACSAPDDLLK 1268


>gi|259490042|ref|NP_001159140.1| hypothetical protein [Zea mays]
 gi|223942207|gb|ACN25187.1| unknown [Zea mays]
 gi|414585730|tpg|DAA36301.1| TPA: hypothetical protein ZEAMMB73_369042 [Zea mays]
          Length = 885

 Score =  440 bits (1131), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 275/823 (33%), Positives = 425/823 (51%), Gaps = 92/823 (11%)

Query: 29  HAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNEMP 88
           H  +I H     L+   KL  RLSD      A  LF  +P  D+  +N ++ G+  +   
Sbjct: 88  HPNVITHNVM--LNGYAKLG-RLSD------AVELFGRMPARDVASWNTLMSGYFQSRQY 138

Query: 89  KSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGS------- 141
             S+  +  + ++    P+ FT +  + +  A    S+ + L   A+V  + S       
Sbjct: 139 LVSLETFLSMHRSGDSWPNAFTLACAMKSCGALGWHSLALQLL--AMVQKFDSQDDSEVA 196

Query: 142 ----DLFVGAALVDL----------------------YFKFSWVKSARKVFDKMPEKDTV 175
               D+FV    VDL                      Y K   V  A ++FD MPE+D V
Sbjct: 197 AALVDMFVRCGAVDLASRLFVRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVV 256

Query: 176 LWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCL 235
            WN M+S L ++   ++++ +  DM ++ G  LDST+  + L A A +  LR G ++   
Sbjct: 257 SWNMMVSALSQSGRVREALDMVVDM-QSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQ 315

Query: 236 GLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESS 295
            ++   H   YV + LV  Y+K G  + A+ +F  +   + ++   +ISG+   G    S
Sbjct: 316 VIRNLPHIDPYVASALVELYAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTES 375

Query: 296 LRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSG-----IVSNSSV-- 348
           + LF Q+ A    ++   +  LI        L L   +HS CLKSG     +VSNS +  
Sbjct: 376 VELFNQMRAELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISM 435

Query: 349 ------------------------LTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMI 384
                                    T++ T YS++  +  AR+ FD  SEK++ +WNAM+
Sbjct: 436 YAKCDNLQSAEAIFRFMNEKDIVSWTSMITAYSQVGNVAKAREFFDGMSEKNVITWNAML 495

Query: 385 AGYTQNGLTEEAISLFQEMQASK-VAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNF 443
             Y Q+G  E+ + +++ M + + V P+ VT  ++   CA LGA  LG  +         
Sbjct: 496 GAYIQHGAEEDGLRMYKVMLSEEYVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGL 555

Query: 444 ESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSE 503
             +  V+ A+I MY+KCG I+EAR++FD ++ K  V+WN MI+GY  HG G +A+++F +
Sbjct: 556 IIDTSVANAVITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDD 615

Query: 504 MLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAG 563
           +L  G +P  +++++VL  CSH+GLV+EG   F  M   H   P  EH++CMVD+LGRAG
Sbjct: 616 ILKRGAKPDYISYVAVLSGCSHSGLVQEGKFYFDMMKRAHNISPGLEHFSCMVDLLGRAG 675

Query: 564 QLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSN 623
            L +A + I  + ++P   VWGALL AC IH +  LA +A++ +FELD  + G ++L++ 
Sbjct: 676 HLTEAKDLIDDMPMKPTAEVWGALLSACKIHGNNELAELAAKHVFELDSPDSGSYMLMAK 735

Query: 624 IYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEK 683
           IY+       +A +R++++ + + K PG + +EV    HVF + D  HPQ  AI   L++
Sbjct: 736 IYADAGKSDDSAQIRKLMRDKGIKKNPGYSWMEVDNKVHVFKADDVSHPQVLAIRKKLDE 795

Query: 684 LNGKMREAGF--QTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNL 741
           L  K+   G+     T + +H             HSEKLA+AFGL+       I I+KNL
Sbjct: 796 LMEKIARLGYVRTDSTRSEIH-------------HSEKLAVAFGLMTLPTWMPIHIMKNL 842

Query: 742 RVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           R+C DCHT  K IS VTGR  V+RDA RFHHF GG CSCGDYW
Sbjct: 843 RICGDCHTVIKLISTVTGREFVIRDAVRFHHFNGGSCSCGDYW 885



 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 92/416 (22%), Positives = 173/416 (41%), Gaps = 60/416 (14%)

Query: 27  QTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCY--ARALFFSIPKPDLFLFNVIIRGFSN 84
           Q HAQ+I +    D    + L    +  K+ C+  A+ +F S+   +   + V+I GF  
Sbjct: 311 QLHAQVIRNLPHIDPYVASALVELYA--KSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQ 368

Query: 85  NEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLF 144
                 S+  +  +R    +T D F  + ++S   +  D  +G  LH   + SG    + 
Sbjct: 369 YGCFTESVELFNQMRAEL-MTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVV 427

Query: 145 VGAALVDLY------------FKF-------SW------------VKSARKVFDKMPEKD 173
           V  +L+ +Y            F+F       SW            V  AR+ FD M EK+
Sbjct: 428 VSNSLISMYAKCDNLQSAEAIFRFMNEKDIVSWTSMITAYSQVGNVAKAREFFDGMSEKN 487

Query: 174 TVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQ 233
            + WN+M+   +++   +D + ++  M+       D  +   +    A++   +LG +I 
Sbjct: 488 VITWNAMLGAYIQHGAEEDGLRMYKVMLSEEYVRPDWVTYVTLFKGCADLGANKLGDQII 547

Query: 234 CLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTE 293
              +K+G      V   +++ YSKCG +  A  +F  +   D++S NAMI+GY+ +G  +
Sbjct: 548 GRTVKVGLIIDTSVANAVITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGYSQHGMGK 607

Query: 294 SSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSG------------ 341
            ++ +F  +L    + +  + V +           L+ C HS  ++ G            
Sbjct: 608 QAIEIFDDILKRGAKPDYISYVAV-----------LSGCSHSGLVQEGKFYFDMMKRAHN 656

Query: 342 IVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLAS-WNAMIAGYTQNGLTEEA 396
           I       + +  +  R   +  A+ L D+   K  A  W A+++    +G  E A
Sbjct: 657 ISPGLEHFSCMVDLLGRAGHLTEAKDLIDDMPMKPTAEVWGALLSACKIHGNNELA 712


>gi|297819260|ref|XP_002877513.1| hypothetical protein ARALYDRAFT_905886 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297323351|gb|EFH53772.1| hypothetical protein ARALYDRAFT_905886 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 657

 Score =  440 bits (1131), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 229/562 (40%), Positives = 337/562 (59%), Gaps = 6/562 (1%)

Query: 229 GMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTC 288
           G+ +    L  G     ++ T L+  YS  G V+ A  +F    +  +   NA+    T 
Sbjct: 96  GLRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTL 155

Query: 289 NGKTESSLRLFRQL----LASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVS 344
            G  E  L L+ ++    + S     +  +   +       HL     IH+   + G  S
Sbjct: 156 AGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTADHLTKGKEIHAHLTRRGYNS 215

Query: 345 NSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEM- 403
           +  ++T L  +Y+R   ++ A  +F+    +++ SW+AMIA Y +NG   EA+  F+EM 
Sbjct: 216 HVYIMTTLVDMYARFGCVDYASYVFNGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMM 275

Query: 404 -QASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGN 462
            +    +PN VT+ S+L ACA L A+  G+ +H  +  R  +S + V +AL+ MY +CG 
Sbjct: 276 TETKDSSPNSVTMVSVLQACASLAALEQGRLIHGYILRRGLDSILPVISALVTMYGRCGK 335

Query: 463 IVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYA 522
           +   + +FD M  +  V+WN++IS YG+HG+G +A+Q+F EML +G  P+ VTF+SVL A
Sbjct: 336 LDVGQRVFDRMHDRDVVSWNSLISSYGVHGYGRKAIQIFEEMLANGASPTPVTFVSVLGA 395

Query: 523 CSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPA 582
           CSH GLV EG  +F+SM  DHG KP  EHYACMVD+LGRA +L++A + ++ +  EPGP 
Sbjct: 396 CSHEGLVEEGKRLFESMWRDHGIKPQVEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPK 455

Query: 583 VWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVK 642
           VWG+LLG+C IH +  LA  AS +LF L+P+N G +VLL++IY+  + + +   V+++++
Sbjct: 456 VWGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLE 515

Query: 643 KRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALH 702
            R L K PG   +EV    + F S D+ +P    I+A L KL   M+E G+  +T   L+
Sbjct: 516 HRGLQKLPGRCWMEVRRKMYSFVSMDEFNPLMEQIHAFLVKLAEDMKEKGYIPQTKGVLY 575

Query: 703 DVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVI 762
           ++E EEKE ++  HSEKLA+AFGLI T  G  IRI KNLR+C DCH  TKFISK   + I
Sbjct: 576 ELETEEKERIVLGHSEKLALAFGLINTSKGEPIRITKNLRLCEDCHLFTKFISKFMEKEI 635

Query: 763 VVRDANRFHHFKGGVCSCGDYW 784
           +VRD NRFH FK GVCSCGDYW
Sbjct: 636 LVRDVNRFHRFKNGVCSCGDYW 657



 Score =  176 bits (446), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 113/425 (26%), Positives = 211/425 (49%), Gaps = 15/425 (3%)

Query: 82  FSNNEMPKSSICFYTHLRKNTAL-----TPDNFTYSFVLSAASACCDRSIGVLLHGHAIV 136
            SNN++ +S +C    L++   +     +P   TY  ++         S G+ +H H + 
Sbjct: 47  ISNNQLIQS-LCKEGKLKQALRVLSQESSPSQQTYELLILCCGHRSSLSDGLRVHRHILD 105

Query: 137 SGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWV 196
           +G   D F+   L+ +Y     V  ARKVFDK  ++   +WN++   L      ++ + +
Sbjct: 106 NGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGL 165

Query: 197 FGDMVRNGGTWLDSTSVAAVLPAVAEVQ----ELRLGMEIQCLGLKLGFHDHVYVLTGLV 252
           +  M R G    D  +   VL A    +     L  G EI     + G++ HVY++T LV
Sbjct: 166 YWKMNRIG-VESDRFTYTYVLKACVASECTADHLTKGKEIHAHLTRRGYNSHVYIMTTLV 224

Query: 253 SFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAE--RVN 310
             Y++ G V+ A  +F  +   +++S +AMI+ Y  NGK   +LR FR+++   +    N
Sbjct: 225 DMYARFGCVDYASYVFNGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMTETKDSSPN 284

Query: 311 SSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFD 370
           S T+V ++        L     IH + L+ G+ S   V++AL T+Y R  +++  +++FD
Sbjct: 285 SVTMVSVLQACASLAALEQGRLIHGYILRRGLDSILPVISALVTMYGRCGKLDVGQRVFD 344

Query: 371 ESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISL 430
              ++ + SWN++I+ Y  +G   +AI +F+EM A+  +P PVT  S+L AC+  G +  
Sbjct: 345 RMHDRDVVSWNSLISSYGVHGYGRKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEE 404

Query: 431 GKWVHE-LVKSRNFESNIYVSTALIDMYAKCGNIVEARELF-DLMSHKSEVTWNTMISGY 488
           GK + E + +    +  +     ++D+  +   + EA ++  D+ +      W +++   
Sbjct: 405 GKRLFESMWRDHGIKPQVEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSC 464

Query: 489 GLHGH 493
            +HG+
Sbjct: 465 RIHGN 469



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 111/463 (23%), Positives = 200/463 (43%), Gaps = 56/463 (12%)

Query: 27  QTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNE 86
           + H  I+ +G   D    TKL    SD  +  YAR +F    K  ++++N + R  +   
Sbjct: 98  RVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAG 157

Query: 87  MPKSSICFYTHLRKNTALTPDNFTYSFVLSA--ASACCDRSI--GVLLHGHAIVSGYGSD 142
             +  +  Y  + +   +  D FTY++VL A  AS C    +  G  +H H    GY S 
Sbjct: 158 HGEEVLGLYWKMNR-IGVESDRFTYTYVLKACVASECTADHLTKGKEIHAHLTRRGYNSH 216

Query: 143 LFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMV- 201
           +++   LVD+Y +F  V  A  VF+ MP ++ V W++MI+   KN    +++  F +M+ 
Sbjct: 217 VYIMTTLVDMYARFGCVDYASYVFNGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMT 276

Query: 202 RNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEV 261
               +  +S ++ +VL A A +  L  G  I    L+ G    + V++ LV+ Y +CG++
Sbjct: 277 ETKDSSPNSVTMVSVLQACASLAALEQGRLIHGYILRRGLDSILPVISALVTMYGRCGKL 336

Query: 262 ERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVF 321
           +  + +F  +   D++S N++IS Y  +G    ++++F ++LA+       T V ++   
Sbjct: 337 DVGQRVFDRMHDRDVVSWNSLISSYGVHGYGRKAIQIFEEMLANGASPTPVTFVSVLGA- 395

Query: 322 YPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLF-----DESSEKS 376
                          C   G+V                   E  ++LF     D   +  
Sbjct: 396 ---------------CSHEGLV-------------------EEGKRLFESMWRDHGIKPQ 421

Query: 377 LASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHE 436
           +  +  M+    +    +EA  + Q+M   +  P P    S+L +C   G + L     E
Sbjct: 422 VEHYACMVDLLGRANRLDEAAKMVQDM---RTEPGPKVWGSLLGSCRIHGNVELA----E 474

Query: 437 LVKSRNF---ESNIYVSTALIDMYAKCGNIVEARELFDLMSHK 476
               R F     N      L D+YA+     E + +  L+ H+
Sbjct: 475 RASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHR 517



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 53/215 (24%), Positives = 97/215 (45%), Gaps = 11/215 (5%)

Query: 381 NAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKS 440
           N +I    + G  ++A+ +  +    + +P+  T   ++  C    ++S G  VH  +  
Sbjct: 50  NQLIQSLCKEGKLKQALRVLSQ----ESSPSQQTYELLILCCGHRSSLSDGLRVHRHILD 105

Query: 441 RNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQL 500
              + + +++T LI MY+  G++  AR++FD    ++   WN +     L GHG E L L
Sbjct: 106 NGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGL 165

Query: 501 FSEMLHSGIRPSGVTFLSVLYAC----SHAGLVREGDEIFQSMIHDHGFKPLAEHYACMV 556
           + +M   G+     T+  VL AC      A  + +G EI  + +   G+         +V
Sbjct: 166 YWKMNRIGVESDRFTYTYVLKACVASECTADHLTKGKEI-HAHLTRRGYNSHVYIMTTLV 224

Query: 557 DILGRAGQLEKALEFIKGLAVEPGPAVWGALLGAC 591
           D+  R G ++ A     G+ V      W A++ AC
Sbjct: 225 DMYARFGCVDYASYVFNGMPVR-NVVSWSAMI-AC 257


>gi|357112489|ref|XP_003558041.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
           mitochondrial-like [Brachypodium distachyon]
          Length = 706

 Score =  440 bits (1131), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 243/734 (33%), Positives = 401/734 (54%), Gaps = 72/734 (9%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           ARA F ++P      +N +I G+  N +P +++  +  +        D  +Y+ +++   
Sbjct: 36  ARAAFDAMPLRTTASYNALIAGYFRNHLPDAALGLFHRMPSR-----DLGSYNALIA--- 87

Query: 120 ACCDRSIGVLLHGHAIVSGYGS--------DLFVGAALVDLYFKFSWVKSARKVFDKMPE 171
                  G+ L  H +     +         +    +L+  Y +   +  A ++F +MPE
Sbjct: 88  -------GLSLRRHTLPDAAAALASIPLPPSVVSFTSLLRGYVRHGLLADAIRLFHQMPE 140

Query: 172 KDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGME 231
           ++ V +  ++ G +      ++  +F +M        D   VA                 
Sbjct: 141 RNHVTYTVLLGGFLDAGRVNEARKLFDEMP-------DKDVVAR---------------- 177

Query: 232 IQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGK 291
                            T ++S Y + G +  A  LF ++ + +++S  AMISGY  NGK
Sbjct: 178 -----------------TAMLSGYCQAGRITEARALFDEMPKRNVVSWTAMISGYAQNGK 220

Query: 292 TESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTA 351
              + +LF  +    E   ++ +VG I      GH+     + +      + + ++++  
Sbjct: 221 VILARKLFEVMPDRNEVSWTAMLVGYIQA----GHVEDAEDLFNAMPDHPVAACNAMMVG 276

Query: 352 LSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPN 411
               + +   ++AA+ +F+    +   +W+AMI  Y QN    EA+S F+EM    + PN
Sbjct: 277 ----FGQHGMVDAAKAMFERMCARDDGTWSAMIKVYEQNEFLMEALSTFREMLCRGIRPN 332

Query: 412 PVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFD 471
             +  SIL+ CA L     G+ +H  +   +F+++++  +ALI MY KCGN+ +A+ +F+
Sbjct: 333 YTSFISILTVCAALATADYGRELHAAMLRCSFDTDVFAVSALITMYIKCGNLDKAKRVFN 392

Query: 472 LMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVRE 531
           +   K  V WN+MI+GY  HG G EAL +F ++  + + P G+T++ VL ACS+ G V+E
Sbjct: 393 MFEPKDVVMWNSMITGYAQHGLGEEALGIFDDLRLARMAPDGITYIGVLTACSYTGKVKE 452

Query: 532 GDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGAC 591
           G EIF SM  +   +  A HY+CMVD+LGRAG +++AL+ I  + VEP   +WGAL+GAC
Sbjct: 453 GREIFNSMGMNSSIRLGAAHYSCMVDLLGRAGLVDEALDLINNMPVEPDAIIWGALMGAC 512

Query: 592 MIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPG 651
            +HK+  +A VA++KL EL+P + G +VLLS+IY++   +  A+ +R+ +  R L K+PG
Sbjct: 513 RMHKNAEIAEVAAKKLLELEPGSAGPYVLLSHIYTSTGRWEDASDMRKFISSRNLNKSPG 572

Query: 652 CTLIEVGGTPHVFTSGDQL-HPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKE 710
           C+ IE     H+FTSGD L HP+   I  MLE+L+G + E+G+  +    LHDV+EE+K 
Sbjct: 573 CSWIEYNKMVHLFTSGDVLSHPEHAIILNMLEELDGLLMESGYSADGSFVLHDVDEEQKA 632

Query: 711 LMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRF 770
             ++ HSE+ A+A+GL+    G  IR++KNLRVC DCH+A K I+K+T R I++RDANRF
Sbjct: 633 QSLRYHSERQAVAYGLLKVPAGMPIRVMKNLRVCGDCHSAIKLITKITSREIILRDANRF 692

Query: 771 HHFKGGVCSCGDYW 784
           HHFK G+CSC DYW
Sbjct: 693 HHFKDGLCSCRDYW 706



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 106/429 (24%), Positives = 183/429 (42%), Gaps = 90/429 (20%)

Query: 252 VSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNS 311
           +++  + G +E A   F  +      S NA+I+GY  N   +++L LF ++ +      +
Sbjct: 24  IAWLVRAGNIEGARAAFDAMPLRTTASYNALIAGYFRNHLPDAALGLFHRMPSRDLGSYN 83

Query: 312 STIVGL----------------IPVFYPFGHLHLTNCIHSFCLKSGIVSNS--------- 346
           + I GL                IP+  P   +  T+ +  + ++ G+++++         
Sbjct: 84  ALIAGLSLRRHTLPDAAAALASIPL--PPSVVSFTSLLRGY-VRHGLLADAIRLFHQMPE 140

Query: 347 ------SVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLF 400
                 +VL        R+NE   ARKLFDE  +K + +  AM++GY Q G   EA +LF
Sbjct: 141 RNHVTYTVLLGGFLDAGRVNE---ARKLFDEMPDKDVVARTAMLSGYCQAGRITEARALF 197

Query: 401 QEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKC 460
            EM    V    V+ ++++S  AQ G + L + + E++  RN  S     TA++  Y + 
Sbjct: 198 DEMPKRNV----VSWTAMISGYAQNGKVILARKLFEVMPDRNEVS----WTAMLVGYIQA 249

Query: 461 GNIVEARELFDLMSHKSEVTWNTMISGYGLHGHG-------------------------- 494
           G++ +A +LF+ M        N M+ G+G HG                            
Sbjct: 250 GHVEDAEDLFNAMPDHPVAACNAMMVGFGQHGMVDAAKAMFERMCARDDGTWSAMIKVYE 309

Query: 495 -----LEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLA 549
                +EAL  F EML  GIRP+  +F+S+L  C+       G E+  +M+    F    
Sbjct: 310 QNEFLMEALSTFREMLCRGIRPNYTSFISILTVCAALATADYGRELHAAMLR-CSFDTDV 368

Query: 550 EHYACMVDILGRAGQLEKALEFIKGLAVEPGPAV-WGALLG----------ACMIHKDTN 598
              + ++ +  + G L+KA         EP   V W +++           A  I  D  
Sbjct: 369 FAVSALITMYIKCGNLDKAKRVFN--MFEPKDVVMWNSMITGYAQHGLGEEALGIFDDLR 426

Query: 599 LARVASEKL 607
           LAR+A + +
Sbjct: 427 LARMAPDGI 435



 Score = 82.4 bits (202), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 102/460 (22%), Positives = 184/460 (40%), Gaps = 91/460 (19%)

Query: 2   SMKTPQSRNLFLSLLKGAKTQSQLTQTHAQIIIHGF-QNDLSTVTKLAHRLSDFKATCYA 60
           S+  P S   F SLL+G      L    A  + H   + +  T T L     D      A
Sbjct: 105 SIPLPPSVVSFTSLLRGYVRHGLLAD--AIRLFHQMPERNHVTYTVLLGGFLDAGRVNEA 162

Query: 61  RALFFSIPKPDLFLFNVIIRGFSN-----------NEMPKSSICFYTHL----------- 98
           R LF  +P  D+     ++ G+             +EMPK ++  +T +           
Sbjct: 163 RKLFDEMPDKDVVARTAMLSGYCQAGRITEARALFDEMPKRNVVSWTAMISGYAQNGKVI 222

Query: 99  --RKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLF-------VGA-- 147
             RK   + PD    S+            +G +  GH   +    DLF       V A  
Sbjct: 223 LARKLFEVMPDRNEVSWTAML--------VGYIQAGHVEDA---EDLFNAMPDHPVAACN 271

Query: 148 ALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTW 207
           A++  + +   V +A+ +F++M  +D   W++MI    +N    +++  F +M+  G   
Sbjct: 272 AMMVGFGQHGMVDAAKAMFERMCARDDGTWSAMIKVYEQNEFLMEALSTFREMLCRG-IR 330

Query: 208 LDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELL 267
            + TS  ++L   A +     G E+    L+  F   V+ ++ L++ Y KCG +++A+ +
Sbjct: 331 PNYTSFISILTVCAALATADYGRELHAAMLRCSFDTDVFAVSALITMYIKCGNLDKAKRV 390

Query: 268 FRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHL 327
           F      D++  N+MI+GY  +G  E +L +F  L  +    +  T +G+          
Sbjct: 391 FNMFEPKDVVMWNSMITGYAQHGLGEEALGIFDDLRLARMAPDGITYIGV---------- 440

Query: 328 HLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKS-----LASWNA 382
            LT C ++  +K G                        R++F+     S      A ++ 
Sbjct: 441 -LTACSYTGKVKEG------------------------REIFNSMGMNSSIRLGAAHYSC 475

Query: 383 MIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSAC 422
           M+    + GL +EA+ L   M    V P+ +   +++ AC
Sbjct: 476 MVDLLGRAGLVDEALDLINNM---PVEPDAIIWGALMGAC 512



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 80/315 (25%), Positives = 142/315 (45%), Gaps = 24/315 (7%)

Query: 274 PDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCI 333
           P +++ NA I+     G  E +   F  +        ++ I G      P   L L + +
Sbjct: 15  PAVVAANARIAWLVRAGNIEGARAAFDAMPLRTTASYNALIAGYFRNHLPDAALGLFHRM 74

Query: 334 HSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLT 393
            S  L S     ++++  LS    R    +AA  L       S+ S+ +++ GY ++GL 
Sbjct: 75  PSRDLGS----YNALIAGLS--LRRHTLPDAAAALASIPLPPSVVSFTSLLRGYVRHGLL 128

Query: 394 EEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTAL 453
            +AI LF +M       N VT + +L      G ++  + + + +  ++    +   TA+
Sbjct: 129 ADAIRLFHQMPER----NHVTYTVLLGGFLDAGRVNEARKLFDEMPDKD----VVARTAM 180

Query: 454 IDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSG 513
           +  Y + G I EAR LFD M  ++ V+W  MISGY  +G  + A +LF  M       + 
Sbjct: 181 LSGYCQAGRITEARALFDEMPKRNVVSWTAMISGYAQNGKVILARKLFEVMPDR----NE 236

Query: 514 VTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIK 573
           V++ ++L     AG V + +++F +M  DH   P+A   A MV   G+ G ++ A    +
Sbjct: 237 VSWTAMLVGYIQAGHVEDAEDLFNAM-PDH---PVAACNAMMVG-FGQHGMVDAAKAMFE 291

Query: 574 GLAVEPGPAVWGALL 588
            +        W A++
Sbjct: 292 RMCAR-DDGTWSAMI 305


>gi|449502858|ref|XP_004161763.1| PREDICTED: uncharacterized LOC101222622 [Cucumis sativus]
          Length = 2355

 Score =  439 bits (1130), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 229/605 (37%), Positives = 350/605 (57%), Gaps = 41/605 (6%)

Query: 177 WNSMISGLMKNCCFQDSIWVFGD-MVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCL 235
           +N+++    ++  +  +I  F + +V       D  +  +VL A A + ++  G ++ C 
Sbjct: 93  YNALLKAFSQHNAWHTTISYFNNQLVLPNAPNPDEYTFTSVLKACAGLAQVLEGQKVHCF 152

Query: 236 GLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESS 295
             K G   +++V   LV  Y K G    A+ LF ++V  D++S N +ISGY  +G  + +
Sbjct: 153 VTKYGCESNLFVRNSLVDLYFKVGCNCIAQKLFDEMVVRDVVSWNTLISGYCFSGMVDKA 212

Query: 296 LRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTV 355
             +F  ++                                   +  +VS S++++     
Sbjct: 213 RMVFDGMM-----------------------------------EKNLVSWSTMISG---- 233

Query: 356 YSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQ-ASKVAPNPVT 414
           Y+R+  +E AR+LF+    +++ SWNAMIAGY QN    +AI LF++MQ    +APN VT
Sbjct: 234 YARVGNLEEARQLFENMPMRNVVSWNAMIAGYAQNEKYADAIELFRQMQHEGGLAPNDVT 293

Query: 415 VSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMS 474
           + S+LSACA LGA+ LGKW+H  ++    E  +++  AL DMYAKCG ++EA+ +F  M 
Sbjct: 294 LVSVLSACAHLGALDLGKWIHRFIRRNKIEVGLFLGNALADMYAKCGCVLEAKGVFHEMH 353

Query: 475 HKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDE 534
            +  ++W+ +I G  ++G+  EA   F+EM+  G+ P+ ++F+ +L AC+HAGLV +G E
Sbjct: 354 ERDVISWSIIIMGLAMYGYANEAFNFFAEMIEDGLEPNDISFMGLLTACTHAGLVDKGLE 413

Query: 535 IFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIH 594
            F  M   +G  P  EHY C+VD+L RAG+L++A   I  + ++P   VWGALLG C I+
Sbjct: 414 YFDMMPQVYGITPKIEHYGCVVDLLSRAGRLDQAESLINSMPMQPNVIVWGALLGGCRIY 473

Query: 595 KDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTL 654
           KD         ++ ELD  + G  V L+N+Y++      AA+ R  ++  K  K PGC+ 
Sbjct: 474 KDAERGERVVWRILELDSNHSGSLVYLANVYASMGRLDDAASCRLRMRDNKSMKTPGCSW 533

Query: 655 IEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMK 714
           IE+  + + F  GD  HPQS  IY+M+ +L  KM+ AG++ +T   +H+++EEEKE  + 
Sbjct: 534 IEINNSVYEFFMGDSSHPQSLRIYSMIRELKWKMKVAGYKPKTDLVIHNIDEEEKEDALS 593

Query: 715 VHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFK 774
            HSEKLA+AFGLI T  GT IRI+KNLRVC DCH A K ISK+  R IVVRD +RFHHFK
Sbjct: 594 THSEKLALAFGLINTSEGTTIRIVKNLRVCNDCHDAIKIISKIVEREIVVRDRSRFHHFK 653

Query: 775 GGVCS 779
            G CS
Sbjct: 654 DGKCS 658



 Score =  149 bits (376), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 118/464 (25%), Positives = 212/464 (45%), Gaps = 57/464 (12%)

Query: 70  PDLFLFNVIIRGFSNNEMPKSSICFYTH-LRKNTALTPDNFTYSFVLSAASACCDRSIGV 128
           P++F +N +++ FS +    ++I ++ + L    A  PD +T++ VL A +      +  
Sbjct: 88  PNIFAYNALLKAFSQHNAWHTTISYFNNQLVLPNAPNPDEYTFTSVLKACAG-----LAQ 142

Query: 129 LLHG---HAIVSGYG--SDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISG 183
           +L G   H  V+ YG  S+LFV  +LVDLYFK      A+K+FD+M  +D V WN++ISG
Sbjct: 143 VLEGQKVHCFVTKYGCESNLFVRNSLVDLYFKVGCNCIAQKLFDEMVVRDVVSWNTLISG 202

Query: 184 LMKNCCFQDSIWVF-GDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFH 242
              +     +  VF G M +N  +W                                   
Sbjct: 203 YCFSGMVDKARMVFDGMMEKNLVSW----------------------------------- 227

Query: 243 DHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQL 302
                 + ++S Y++ G +E A  LF ++   +++S NAMI+GY  N K   ++ LFRQ+
Sbjct: 228 ------STMISGYARVGNLEEARQLFENMPMRNVVSWNAMIAGYAQNEKYADAIELFRQM 281

Query: 303 LASAERV-NSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNE 361
                   N  T+V ++      G L L   IH F  ++ I     +  AL+ +Y++   
Sbjct: 282 QHEGGLAPNDVTLVSVLSACAHLGALDLGKWIHRFIRRNKIEVGLFLGNALADMYAKCGC 341

Query: 362 MEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSA 421
           +  A+ +F E  E+ + SW+ +I G    G   EA + F EM    + PN ++   +L+A
Sbjct: 342 VLEAKGVFHEMHERDVISWSIIIMGLAMYGYANEAFNFFAEMIEDGLEPNDISFMGLLTA 401

Query: 422 CAQLGAISLG-KWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEV- 479
           C   G +  G ++   + +       I     ++D+ ++ G + +A  L + M  +  V 
Sbjct: 402 CTHAGLVDKGLEYFDMMPQVYGITPKIEHYGCVVDLLSRAGRLDQAESLINSMPMQPNVI 461

Query: 480 TWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSG-VTFLSVLYA 522
            W  ++ G  ++       ++   +L      SG + +L+ +YA
Sbjct: 462 VWGALLGGCRIYKDAERGERVVWRILELDSNHSGSLVYLANVYA 505



 Score = 89.4 bits (220), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 52/163 (31%), Positives = 88/163 (53%), Gaps = 6/163 (3%)

Query: 379 SWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNP--VTVSSILSACAQLGAISLGKWVHE 436
           ++NA++  ++Q+      IS F        APNP   T +S+L ACA L  +  G+ VH 
Sbjct: 92  AYNALLKAFSQHNAWHTTISYFNNQLVLPNAPNPDEYTFTSVLKACAGLAQVLEGQKVHC 151

Query: 437 LVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLE 496
            V     ESN++V  +L+D+Y K G    A++LFD M  +  V+WNT+ISGY   G   +
Sbjct: 152 FVTKYGCESNLFVRNSLVDLYFKVGCNCIAQKLFDEMVVRDVVSWNTLISGYCFSGMVDK 211

Query: 497 ALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSM 539
           A  +F  M+   +    V++ +++   +  G + E  ++F++M
Sbjct: 212 ARMVFDGMMEKNL----VSWSTMISGYARVGNLEEARQLFENM 250



 Score = 80.1 bits (196), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 70/276 (25%), Positives = 125/276 (45%), Gaps = 16/276 (5%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           AR LF ++P  ++  +N +I G++ NE    +I  +  ++    L P++ T   VLSA +
Sbjct: 243 ARQLFENMPMRNVVSWNAMIAGYAQNEKYADAIELFRQMQHEGGLAPNDVTLVSVLSACA 302

Query: 120 ACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNS 179
                 +G  +H     +     LF+G AL D+Y K   V  A+ VF +M E+D + W+ 
Sbjct: 303 HLGALDLGKWIHRFIRRNKIEVGLFLGNALADMYAKCGCVLEAKGVFHEMHERDVISWSI 362

Query: 180 MISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKL 239
           +I GL       ++   F +M+ +G    D  S   +L A      +  G+E        
Sbjct: 363 IIMGLAMYGYANEAFNFFAEMIEDGLEPND-ISFMGLLTACTHAGLVDKGLEY------F 415

Query: 240 GFHDHVYVLTGLVSFY-------SKCGEVERAELLFRDI-VRPDLISCNAMISGYTCNGK 291
                VY +T  +  Y       S+ G +++AE L   + ++P++I   A++ G      
Sbjct: 416 DMMPQVYGITPKIEHYGCVVDLLSRAGRLDQAESLINSMPMQPNVIVWGALLGGCRIYKD 475

Query: 292 TESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHL 327
            E   R+  ++L   +  +S ++V L  V+   G L
Sbjct: 476 AERGERVVWRIL-ELDSNHSGSLVYLANVYASMGRL 510


>gi|22093801|dbj|BAC07088.1| selenium-binding protein-like [Oryza sativa Japonica Group]
          Length = 643

 Score =  439 bits (1130), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 216/523 (41%), Positives = 322/523 (61%)

Query: 262 ERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVF 321
           E    +F +++  D +S N +I G   + + + +L + R++       ++ T+  ++P+F
Sbjct: 121 ESMRKVFDEMLERDAVSWNTLILGCAEHKRHQEALSMVREMWRDGFMPDTFTLSTVLPIF 180

Query: 322 YPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWN 381
                +     +H + +K+G  ++  V ++L  +Y+   +M+ + K+FD  S+     WN
Sbjct: 181 AECADIKRGMVVHGYAIKNGFDNDVFVGSSLIDMYANCTQMDYSMKVFDSFSDCDAVLWN 240

Query: 382 AMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSR 441
           +M+AGY QNG  EEA+ +F+ M  + V P PVT SS++ A   L  + LGK +H  +   
Sbjct: 241 SMLAGYAQNGSVEEALGIFRRMLQAGVRPVPVTFSSLIPAFGNLSLLRLGKQLHAYLIRA 300

Query: 442 NFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLF 501
            F  NI++S++LIDMY KCGN+  AR +F+ +     V+W  MI GY LHG   EA  LF
Sbjct: 301 RFNDNIFISSSLIDMYCKCGNVDIARRVFNGIQSPDIVSWTAMIMGYALHGPTTEAFVLF 360

Query: 502 SEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGR 561
             M    ++P+ +TFL+VL ACSHAGLV  G + F SM + +GF P  EH A + D LGR
Sbjct: 361 ERMELGNVKPNHITFLAVLTACSHAGLVDNGWKYFNSMSNQYGFVPSLEHCAALADTLGR 420

Query: 562 AGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLL 621
           AG L++A  FI  + ++P  +VW  LL AC +HK+T LA   ++K+FEL+P+++G HV+L
Sbjct: 421 AGDLDEAYNFISEMKIKPTSSVWSTLLRACRVHKNTVLAEEVAKKIFELEPKSMGSHVIL 480

Query: 622 SNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAML 681
           SN+YSA   + +AA +R+ ++ + + K P C+ IEV    HVF + D+ HP    I   L
Sbjct: 481 SNMYSASGRWNEAAQLRKSMRIKGMKKEPACSWIEVKNKLHVFIAHDKSHPWYDRIIDAL 540

Query: 682 EKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNL 741
              + +M   G+       L D+EEE+K  ++  HSEKLAI FG+I+T PGT IR++KNL
Sbjct: 541 NVYSEQMIRQGYVPNMEDVLQDIEEEQKREVLCGHSEKLAIVFGIISTPPGTTIRVMKNL 600

Query: 742 RVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           RVC+DCH ATKFISK+  R IVVRD NRFH FK G CSCGD+W
Sbjct: 601 RVCVDCHIATKFISKIVAREIVVRDVNRFHRFKDGNCSCGDFW 643



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 127/475 (26%), Positives = 233/475 (49%), Gaps = 31/475 (6%)

Query: 91  SICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVL---LHGHAIVSGYGSDLFVGA 147
           +I  +  +R + A  P +   + + +A  +C    +  L   LH  AI SG  +D F   
Sbjct: 31  AISLFLQMRASVA--PRSSVPASLPAALKSCAGLGLCTLAASLHALAIRSGSFADRFTAN 88

Query: 148 ALVDLYFKF--------------------SWVKSARKVFDKMPEKDTVLWNSMISGLMKN 187
           AL++L  K                     +  +S RKVFD+M E+D V WN++I G  ++
Sbjct: 89  ALLNLCIKLPGFHHPFGTNGPSGEGGLESAAYESMRKVFDEMLERDAVSWNTLILGCAEH 148

Query: 188 CCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYV 247
              Q+++ +  +M R+G    D+ +++ VLP  AE  +++ GM +    +K GF + V+V
Sbjct: 149 KRHQEALSMVREMWRDGFM-PDTFTLSTVLPIFAECADIKRGMVVHGYAIKNGFDNDVFV 207

Query: 248 LTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAE 307
            + L+  Y+ C +++ +  +F      D +  N+M++GY  NG  E +L +FR++L +  
Sbjct: 208 GSSLIDMYANCTQMDYSMKVFDSFSDCDAVLWNSMLAGYAQNGSVEEALGIFRRMLQAGV 267

Query: 308 RVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARK 367
           R    T   LIP F     L L   +H++ +++    N  + ++L  +Y +   ++ AR+
Sbjct: 268 RPVPVTFSSLIPAFGNLSLLRLGKQLHAYLIRARFNDNIFISSSLIDMYCKCGNVDIARR 327

Query: 368 LFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGA 427
           +F+      + SW AMI GY  +G T EA  LF+ M+   V PN +T  ++L+AC+  G 
Sbjct: 328 VFNGIQSPDIVSWTAMIMGYALHGPTTEAFVLFERMELGNVKPNHITFLAVLTACSHAGL 387

Query: 428 ISLG-KWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHK-SEVTWNTMI 485
           +  G K+ + +     F  ++    AL D   + G++ EA      M  K +   W+T++
Sbjct: 388 VDNGWKYFNSMSNQYGFVPSLEHCAALADTLGRAGDLDEAYNFISEMKIKPTSSVWSTLL 447

Query: 486 SGYGLHGHGLEALQLFSEMLHSGIRPSGV-TFLSVLYACSHAGLVREGDEIFQSM 539
               +H + + A ++  ++     +  G    LS +Y+ S  G   E  ++ +SM
Sbjct: 448 RACRVHKNTVLAEEVAKKIFELEPKSMGSHVILSNMYSAS--GRWNEAAQLRKSM 500



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 60/236 (25%), Positives = 105/236 (44%), Gaps = 28/236 (11%)

Query: 379 SWNAMIAGYTQNGLTEEAISLFQEMQASKVAPN---PVTVSSILSACAQLGAISLGKWVH 435
           SW   I      G    AISLF +M+AS VAP    P ++ + L +CA LG  +L   +H
Sbjct: 14  SWAYQIRMAASQGQFLHAISLFLQMRAS-VAPRSSVPASLPAALKSCAGLGLCTLAASLH 72

Query: 436 EL-VKSRNFESNIYVSTALIDMYAKC---------------GNIVEA-----RELFDLMS 474
            L ++S +F ++ + + AL+++  K                G +  A     R++FD M 
Sbjct: 73  ALAIRSGSF-ADRFTANALLNLCIKLPGFHHPFGTNGPSGEGGLESAAYESMRKVFDEML 131

Query: 475 HKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDE 534
            +  V+WNT+I G   H    EAL +  EM   G  P   T  +VL   +    ++ G  
Sbjct: 132 ERDAVSWNTLILGCAEHKRHQEALSMVREMWRDGFMPDTFTLSTVLPIFAECADIKRGMV 191

Query: 535 IFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGA 590
           +    I + GF       + ++D+     Q++ +++     + +    +W ++L  
Sbjct: 192 VHGYAIKN-GFDNDVFVGSSLIDMYANCTQMDYSMKVFDSFS-DCDAVLWNSMLAG 245



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 39/156 (25%), Positives = 76/156 (48%), Gaps = 1/156 (0%)

Query: 28  THAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNEM 87
            H   I +GF ND+   + L    ++     Y+  +F S    D  L+N ++ G++ N  
Sbjct: 192 VHGYAIKNGFDNDVFVGSSLIDMYANCTQMDYSMKVFDSFSDCDAVLWNSMLAGYAQNGS 251

Query: 88  PKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGA 147
            + ++  +  + +   + P   T+S ++ A        +G  LH + I + +  ++F+ +
Sbjct: 252 VEEALGIFRRMLQ-AGVRPVPVTFSSLIPAFGNLSLLRLGKQLHAYLIRARFNDNIFISS 310

Query: 148 ALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISG 183
           +L+D+Y K   V  AR+VF+ +   D V W +MI G
Sbjct: 311 SLIDMYCKCGNVDIARRVFNGIQSPDIVSWTAMIMG 346


>gi|224119910|ref|XP_002318193.1| predicted protein [Populus trichocarpa]
 gi|222858866|gb|EEE96413.1| predicted protein [Populus trichocarpa]
          Length = 533

 Score =  439 bits (1130), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 222/539 (41%), Positives = 328/539 (60%), Gaps = 14/539 (2%)

Query: 254 FYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERV-NSS 312
            Y+KCG       +F ++   DL+   AMI+ Y    K E +L LF+++      + +S 
Sbjct: 1   MYAKCGLFVDCRKIFDEMSTKDLVCWTAMITAYEQAEKPEEALILFKKMQQEEGLLADSI 60

Query: 313 TIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDES 372
            +V +       G +   + +H +  +  ++    V  ++  ++++    E AR +FD  
Sbjct: 61  AVVSVASAVGQLGDVKNAHTVHGYAFRKSLIEELCVGNSILAMHTKCGNTEKARLVFDMM 120

Query: 373 SEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGK 432
            E+ + SWN+M++GYTQNG   EA+ LF EM+ S   P PVT   ++SACA LG   LG+
Sbjct: 121 MERDVISWNSMLSGYTQNGQATEALLLFDEMRDSDCQPTPVTALIMVSACAYLGFRHLGR 180

Query: 433 WVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLM--SHKSEVTWNTMISGYGL 490
             H+ +     E +  +S AL+DMYAKCG++ +A +LF+ +  + ++  +WN +ISGYG+
Sbjct: 181 KFHDFIVDSRMEIDTNLSNALMDMYAKCGDLEKAVDLFNGIPPTERNAGSWNVLISGYGM 240

Query: 491 HGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLA- 549
           HGHG EAL+LFS M   G+ P+  TF S+L ACSHAGL+ EG + F  M      K L+ 
Sbjct: 241 HGHGKEALELFSRMQEEGVEPNHFTFTSILSACSHAGLIDEGRKCFAEM------KRLSV 294

Query: 550 ----EHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASE 605
               +H+AC+VD+LGRAG L++A + IK +   P   VWGALL AC IH +  L + A+ 
Sbjct: 295 TLEDKHHACVVDMLGRAGLLQEAFDLIKEMPSPPSDGVWGALLLACKIHGNMELGKTAAS 354

Query: 606 KLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFT 665
            L +L+P + GY+VL+SNIY+A   + +   +RQ +K + L K    ++IE G     F 
Sbjct: 355 NLLQLEPNHTGYYVLMSNIYAASNKWKEVWKLRQDMKNKGLKKPAAFSMIEYGKDILGFH 414

Query: 666 SGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFG 725
           + DQ +P    +Y  +E L  +M+ AG+  +   ALHDVEEE+KE M+  HSEKLA+AFG
Sbjct: 415 TADQENPYRHEVYKKMESLAIEMKMAGYVPDLSCALHDVEEEDKERMLNYHSEKLAVAFG 474

Query: 726 LIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           ++  +PG  IR+ KNLRVC DCH+A K+IS +  R I+VRDANRFHHF+GG CSC DYW
Sbjct: 475 VLKIDPGMVIRVTKNLRVCNDCHSAFKYISHIYQRKIIVRDANRFHHFQGGTCSCKDYW 533



 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 99/345 (28%), Positives = 177/345 (51%), Gaps = 3/345 (0%)

Query: 152 LYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDST 211
           +Y K       RK+FD+M  KD V W +MI+   +    ++++ +F  M +  G   DS 
Sbjct: 1   MYAKCGLFVDCRKIFDEMSTKDLVCWTAMITAYEQAEKPEEALILFKKMQQEEGLLADSI 60

Query: 212 SVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDI 271
           +V +V  AV ++ +++    +     +    + + V   +++ ++KCG  E+A L+F  +
Sbjct: 61  AVVSVASAVGQLGDVKNAHTVHGYAFRKSLIEELCVGNSILAMHTKCGNTEKARLVFDMM 120

Query: 272 VRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTN 331
           +  D+IS N+M+SGYT NG+   +L LF ++  S  +    T + ++      G  HL  
Sbjct: 121 MERDVISWNSMLSGYTQNGQATEALLLFDEMRDSDCQPTPVTALIMVSACAYLGFRHLGR 180

Query: 332 CIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFD--ESSEKSLASWNAMIAGYTQ 389
             H F + S +  ++++  AL  +Y++  ++E A  LF+    +E++  SWN +I+GY  
Sbjct: 181 KFHDFIVDSRMEIDTNLSNALMDMYAKCGDLEKAVDLFNGIPPTERNAGSWNVLISGYGM 240

Query: 390 NGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYV 449
           +G  +EA+ LF  MQ   V PN  T +SILSAC+  G I  G+     +K  +       
Sbjct: 241 HGHGKEALELFSRMQEEGVEPNHFTFTSILSACSHAGLIDEGRKCFAEMKRLSVTLEDKH 300

Query: 450 STALIDMYAKCGNIVEARELFDLM-SHKSEVTWNTMISGYGLHGH 493
              ++DM  + G + EA +L   M S  S+  W  ++    +HG+
Sbjct: 301 HACVVDMLGRAGLLQEAFDLIKEMPSPPSDGVWGALLLACKIHGN 345



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 89/378 (23%), Positives = 158/378 (41%), Gaps = 45/378 (11%)

Query: 61  RALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASA 120
           R +F  +   DL  +  +I  +   E P+ ++  +  +++   L  D+     V SA   
Sbjct: 12  RKIFDEMSTKDLVCWTAMITAYEQAEKPEEALILFKKMQQEEGLLADSIAVVSVASAVGQ 71

Query: 121 CCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSM 180
             D      +HG+A       +L VG +++ ++ K    + AR VFD M E+D + WNSM
Sbjct: 72  LGDVKNAHTVHGYAFRKSLIEELCVGNSILAMHTKCGNTEKARLVFDMMMERDVISWNSM 131

Query: 181 ISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLG 240
           +SG  +N    +++ +F +M R+        +   ++ A A +    LG +     +   
Sbjct: 132 LSGYTQNGQATEALLLFDEM-RDSDCQPTPVTALIMVSACAYLGFRHLGRKFHDFIVDSR 190

Query: 241 FHDHVYVLTGLVSFYSKCGEVERAELLFRDI--VRPDLISCNAMISGYTCNGKTESSLRL 298
                 +   L+  Y+KCG++E+A  LF  I     +  S N +ISGY  +G  + +L L
Sbjct: 191 MEIDTNLSNALMDMYAKCGDLEKAVDLFNGIPPTERNAGSWNVLISGYGMHGHGKEALEL 250

Query: 299 FRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSR 358
           F ++             G+ P  + F  + L+ C H+  +  G                 
Sbjct: 251 FSRMQEE----------GVEPNHFTFTSI-LSACSHAGLIDEG----------------- 282

Query: 359 LNEMEAARKLFDESSEKSLASWN----AMIAGYTQNGLTEEAISLFQEMQASKVAPNPVT 414
                  RK F E    S+   +     ++    + GL +EA  L +EM +    P+   
Sbjct: 283 -------RKCFAEMKRLSVTLEDKHHACVVDMLGRAGLLQEAFDLIKEMPSP---PSDGV 332

Query: 415 VSSILSACAQLGAISLGK 432
             ++L AC   G + LGK
Sbjct: 333 WGALLLACKIHGNMELGK 350


>gi|326504484|dbj|BAJ91074.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 823

 Score =  439 bits (1130), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 254/693 (36%), Positives = 406/693 (58%), Gaps = 19/693 (2%)

Query: 102 TALTPDNFTYSFVLSAASACCD----RSIGVLLHGHAIVSGY-GSDLFVGAALVDLYFKF 156
           + L P+ FT   + +AA AC      RS G  + G AI +G+ G+D+ VG AL+D++ + 
Sbjct: 140 SGLRPNAFT---LCAAAHACFPGELFRSSGGTVLGFAIKTGFWGTDVSVGCALIDMFARN 196

Query: 157 SWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAV 216
             + +ARKVF+ + E+  V+W  MI+  ++  C   ++ +F  M+ +G    D  +++++
Sbjct: 197 GDLVAARKVFNGLVERTVVVWTLMITRYVQGGCAGKAVELFLGMLEDGFE-PDGYTMSSM 255

Query: 217 LPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCG---EVERAELLFRDIVR 273
           + A AE     LG ++  L L+LG      V  GLV  Y+K      +E A  +F+ +  
Sbjct: 256 VSACAEQGSAGLGQQLHSLVLRLGLVSDTCVSCGLVDMYTKLQMEQSMECARKVFKRMPT 315

Query: 274 PDLISCNAMISGYT-CNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNC 332
            +++S  A+ISGY  C G+  +++ L  ++L  +   N  T   L+              
Sbjct: 316 HNVMSWTALISGYVQCGGQENNAVELLCEMLNESIEPNHLTYSSLLKACANLSDQDSGRQ 375

Query: 333 IHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGL 392
           IH+  +K+ I + + V  AL ++Y+    ME ARK FD+  E++L S ++ I    + G 
Sbjct: 376 IHARVMKTSIGNVNVVGNALVSMYAESGCMEEARKAFDQLYERNLLSTSSDIG---ETGR 432

Query: 393 TEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTA 452
           +  + S   ++++  V  +  T +S+LSA A +G  + G+ +H L     FES+  +S +
Sbjct: 433 SNASWS--SQIESMDVGVSTFTFASLLSAAATVGLPTKGQQLHALSIKTGFESDKGISNS 490

Query: 453 LIDMYAKCGNIVEARELFDLMSHKSEV-TWNTMISGYGLHGHGLEALQLFSEMLHSGIRP 511
           L+ MY++CG + +A   FD M     V +W ++IS    HGH   AL LF +M+ SG++P
Sbjct: 491 LVSMYSRCGYLDDACRAFDEMEDDHNVISWTSIISALAKHGHAERALSLFHDMILSGVKP 550

Query: 512 SGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEF 571
           + VT+++VL ACSH GLV+EG E F+SM  DH   P  EHYACMVD+L R+G +++ALEF
Sbjct: 551 NDVTYIAVLSACSHVGLVKEGKEYFRSMQKDHRLIPRMEHYACMVDLLARSGLVQEALEF 610

Query: 572 IKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDY 631
           I  +  +    VW  LLGAC  +++  +  +A+  + +L+P++   +VLLSN+Y+    +
Sbjct: 611 INEMPCKADALVWKTLLGACRTYENIEIGEIAARHVIDLEPQDPAPYVLLSNLYAHGGLW 670

Query: 632 LQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREA 691
            + A +R +++ R L+K  G + + VG T H F +GD  HP++  IYA L  L  ++++ 
Sbjct: 671 DEVARIRSLMRHRNLSKETGLSWMHVGNTIHEFRAGDTSHPRAQEIYAKLAVLIREIKDI 730

Query: 692 GFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTAT 751
           G+  +T   LHD+ ++ KE  +  HSEK+A+AFGLI T P   IRI KNLRVC DCH+A 
Sbjct: 731 GYVPDTSIVLHDMSDKLKEQCLLQHSEKIAVAFGLITTLPTKPIRIFKNLRVCADCHSAI 790

Query: 752 KFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           K+ISK TGR I++RD+NRFH  K G CSCG+YW
Sbjct: 791 KYISKSTGREIILRDSNRFHRMKDGKCSCGEYW 823



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 132/491 (26%), Positives = 228/491 (46%), Gaps = 16/491 (3%)

Query: 141 SDLFVGAALVDLYFKFSWVKSARKVFDKMPE-KDTVLWNSMISGLMKNCCFQDSIWVFGD 199
           +D  V  +L+ +Y K   V++AR+VFD M   +D V W +M   L +N   Q+++ + G+
Sbjct: 77  ADALVANSLLTMYSKCGHVRAARRVFDGMRGLRDLVSWTAMAFCLTRNGAEQEALVLLGE 136

Query: 200 MVRNGGTWLDSTSVAAVLPAVAEVQELR-LGMEIQCLGLKLGF-HDHVYVLTGLVSFYSK 257
           M+ + G   ++ ++ A   A    +  R  G  +    +K GF    V V   L+  +++
Sbjct: 137 MLES-GLRPNAFTLCAAAHACFPGELFRSSGGTVLGFAIKTGFWGTDVSVGCALIDMFAR 195

Query: 258 CGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGL 317
            G++  A  +F  +V   ++    MI+ Y   G    ++ LF  +L      +  T+  +
Sbjct: 196 NGDLVAARKVFNGLVERTVVVWTLMITRYVQGGCAGKAVELFLGMLEDGFEPDGYTMSSM 255

Query: 318 IPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRL---NEMEAARKLFDESSE 374
           +      G   L   +HS  L+ G+VS++ V   L  +Y++L     ME ARK+F     
Sbjct: 256 VSACAEQGSAGLGQQLHSLVLRLGLVSDTCVSCGLVDMYTKLQMEQSMECARKVFKRMPT 315

Query: 375 KSLASWNAMIAGYTQNGLTE-EAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKW 433
            ++ SW A+I+GY Q G  E  A+ L  EM    + PN +T SS+L ACA L     G+ 
Sbjct: 316 HNVMSWTALISGYVQCGGQENNAVELLCEMLNESIEPNHLTYSSLLKACANLSDQDSGRQ 375

Query: 434 VHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGH 493
           +H  V   +  +   V  AL+ MYA+ G + EAR+ FD +  ++ ++ ++ I   G  G 
Sbjct: 376 IHARVMKTSIGNVNVVGNALVSMYAESGCMEEARKAFDQLYERNLLSTSSDI---GETGR 432

Query: 494 GLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYA 553
              +     E +  G+  S  TF S+L A +  GL  +G ++    I   GF+       
Sbjct: 433 SNASWSSQIESMDVGV--STFTFASLLSAAATVGLPTKGQQLHALSIKT-GFESDKGISN 489

Query: 554 CMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMI--HKDTNLARVASEKLFELD 611
            +V +  R G L+ A      +  +     W +++ A     H +  L+      L  + 
Sbjct: 490 SLVSMYSRCGYLDDACRAFDEMEDDHNVISWTSIISALAKHGHAERALSLFHDMILSGVK 549

Query: 612 PENVGYHVLLS 622
           P +V Y  +LS
Sbjct: 550 PNDVTYIAVLS 560



 Score = 89.7 bits (221), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 99/441 (22%), Positives = 184/441 (41%), Gaps = 72/441 (16%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           AR +F  +P  ++  +  +I G+      +++         N ++ P++ TYS +L A +
Sbjct: 306 ARKVFKRMPTHNVMSWTALISGYVQCGGQENNAVELLCEMLNESIEPNHLTYSSLLKACA 365

Query: 120 ACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNS 179
              D+  G  +H   + +  G+   VG ALV +Y +   ++ ARK FD++ E++ +  +S
Sbjct: 366 NLSDQDSGRQIHARVMKTSIGNVNVVGNALVSMYAESGCMEEARKAFDQLYERNLLSTSS 425

Query: 180 MISGLMKNCCFQDSIWVFGDMVRNGGTW---LDSTSV-------AAVLPAVAEVQELRLG 229
            I                G+  R+  +W   ++S  V       A++L A A V     G
Sbjct: 426 DI----------------GETGRSNASWSSQIESMDVGVSTFTFASLLSAAATVGLPTKG 469

Query: 230 MEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRP-DLISCNAMISGYTC 288
            ++  L +K GF     +   LVS YS+CG ++ A   F ++    ++IS  ++IS    
Sbjct: 470 QQLHALSIKTGFESDKGISNSLVSMYSRCGYLDDACRAFDEMEDDHNVISWTSIISALAK 529

Query: 289 NGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSV 348
           +G  E +L LF  ++ S  + N  T + +           L+ C H   +K G       
Sbjct: 530 HGHAERALSLFHDMILSGVKPNDVTYIAV-----------LSACSHVGLVKEG------- 571

Query: 349 LTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKV 408
                  Y R   M+   +L        +  +  M+    ++GL +EA+    EM     
Sbjct: 572 -----KEYFR--SMQKDHRLIPR-----MEHYACMVDLLARSGLVQEALEFINEMPCK-- 617

Query: 409 APNPVTVSSILSACAQLGAISLGKWVHELVKSRNFE--------SNIYVSTALIDMYAKC 460
             + +   ++L AC     I +G+     V     +        SN+Y    L D  A+ 
Sbjct: 618 -ADALVWKTLLGACRTYENIEIGEIAARHVIDLEPQDPAPYVLLSNLYAHGGLWDEVARI 676

Query: 461 GNIVEARELFDLMSHKSEVTW 481
            +++  R L    S ++ ++W
Sbjct: 677 RSLMRHRNL----SKETGLSW 693


>gi|413941558|gb|AFW74207.1| hypothetical protein ZEAMMB73_978994 [Zea mays]
          Length = 580

 Score =  439 bits (1129), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 226/498 (45%), Positives = 321/498 (64%), Gaps = 2/498 (0%)

Query: 289 NGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSV 348
            G   ++L  +R LLA+A   +S     +         +     IH+  +  G+ SN  V
Sbjct: 83  RGLPAAALAFYRCLLAAALPFSSFAFTSVAKACADLSAIRAGMGIHAHAVLLGLGSNRFV 142

Query: 349 LTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKV 408
            T+L  +YS+  +++ ARKLFD   +KS+ +WNAMI+GY QNGL   AI +++EMQ +  
Sbjct: 143 QTSLVVLYSKCGQLDVARKLFDAIRDKSVVAWNAMISGYEQNGLAGRAIEVYREMQMAGE 202

Query: 409 APNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARE 468
           AP+  T  + LSACAQ GA+ LG+ V +L+ S   E N+ +  AL++MYA+CG + +ARE
Sbjct: 203 APDSATFVATLSACAQAGALDLGRQVDKLIVSERMEMNVVLGAALVNMYARCGLVNKARE 262

Query: 469 LFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGL 528
            F+++  ++ VTW +MI+GYG+HGHG EA++LF+ M   G  P+ VTF++VL AC+HAGL
Sbjct: 263 WFNMLQERNVVTWTSMIAGYGMHGHGGEAVKLFNLMRQQGPPPNDVTFVAVLSACAHAGL 322

Query: 529 VREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFI-KGLAVEPGPAVWGAL 587
           V EG + F SM   +G  P  EHY  MVD+ GRAG L+ A+ FI   +  EPGP VW A+
Sbjct: 323 VSEGRDAFASMKSVYGLVPRVEHYCSMVDMYGRAGLLDDAMRFIHDSIPGEPGPEVWTAM 382

Query: 588 LGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLA 647
           LGAC +HKD NL    +E+L  L+PE+  + VLLSN+Y+          VR  + KR+L 
Sbjct: 383 LGACKMHKDFNLGVEVAERLIALEPESPSHRVLLSNLYALSGKMNHVEKVRDTMIKRRLK 442

Query: 648 KAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEE 707
           K  G +LIE+ G  H+F  G++ HP+++ IY  LEKL  K+ + G+  +T + LH++EEE
Sbjct: 443 KPIGYSLIEIAGVAHLFRMGEKSHPKTSEIYQYLEKLIEKITDVGYVPKTDSVLHELEEE 502

Query: 708 EKELMMKVHSEKLAIAFGLIATEP-GTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRD 766
           E+E  ++ H EKLA+AFGL+ T    T IRIIKNLR+C DCH A K++S V  R I+VRD
Sbjct: 503 EREFALRYHGEKLAVAFGLMMTSGCTTPIRIIKNLRICEDCHLAIKYMSAVENREIIVRD 562

Query: 767 ANRFHHFKGGVCSCGDYW 784
            +RFHHFK G CSC +YW
Sbjct: 563 MHRFHHFKAGKCSCQEYW 580



 Score =  155 bits (392), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 132/473 (27%), Positives = 218/473 (46%), Gaps = 44/473 (9%)

Query: 6   PQSRNL-FLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALF 64
           P  R+  + SLL        L Q HA++++ G  + L  +TKLA       A  YAR L 
Sbjct: 3   PHRRSPEYNSLLLAGPRLGPLKQAHARLVVSGHGDSLPLITKLATLAVAAGAASYARLLA 62

Query: 65  FSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDR 124
            S P PD FLF  + R  +   +P +++ FY  L    AL   +F ++   S A AC D 
Sbjct: 63  ASHPAPDSFLFCSLTRATARRGLPAAALAFYRCLLA-AALPFSSFAFT---SVAKACADL 118

Query: 125 SI---GVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMI 181
           S    G+ +H HA++ G GS+ FV  +LV LY K   +  ARK+FD + +K  V WN+MI
Sbjct: 119 SAIRAGMGIHAHAVLLGLGSNRFVQTSLVVLYSKCGQLDVARKLFDAIRDKSVVAWNAMI 178

Query: 182 SGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGF 241
           SG  +N     +I V+ +M +  G   DS +  A L A A+   L LG ++  L +    
Sbjct: 179 SGYEQNGLAGRAIEVYREM-QMAGEAPDSATFVATLSACAQAGALDLGRQVDKLIVSERM 237

Query: 242 HDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQ 301
             +V +   LV+ Y++CG V +A   F  +   ++++  +MI+GY  +G    +++LF  
Sbjct: 238 EMNVVLGAALVNMYARCGLVNKAREWFNMLQERNVVTWTSMIAGYGMHGHGGEAVKLFNL 297

Query: 302 LLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNS-SVLTALSTVYSRLN 360
           +       N  T V ++                S C  +G+VS       ++ +VY  + 
Sbjct: 298 MRQQGPPPNDVTFVAVL----------------SACAHAGLVSEGRDAFASMKSVYGLVP 341

Query: 361 EMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILS 420
            +E                + +M+  Y + GL ++A+    +    +  P P   +++L 
Sbjct: 342 RVE---------------HYCSMVDMYGRAGLLDDAMRFIHDSIPGE--PGPEVWTAMLG 384

Query: 421 ACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLM 473
           AC      +LG  V E + +   ES  +    L ++YA  G +    ++ D M
Sbjct: 385 ACKMHKDFNLGVEVAERLIALEPESPSH-RVLLSNLYALSGKMNHVEKVRDTM 436



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 116/431 (26%), Positives = 192/431 (44%), Gaps = 13/431 (3%)

Query: 126 IGVLLHGHA--IVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISG 183
           +G L   HA  +VSG+G  L +   L  L         AR +    P  D+ L+ S+   
Sbjct: 20  LGPLKQAHARLVVSGHGDSLPLITKLATLAVAAGAASYARLLAASHPAPDSFLFCSLTRA 79

Query: 184 LMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHD 243
             +      +   F   +        S +  +V  A A++  +R GM I    + LG   
Sbjct: 80  TARRG-LPAAALAFYRCLLAAALPFSSFAFTSVAKACADLSAIRAGMGIHAHAVLLGLGS 138

Query: 244 HVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLL 303
           + +V T LV  YSKCG+++ A  LF  I    +++ NAMISGY  NG    ++ ++R++ 
Sbjct: 139 NRFVQTSLVVLYSKCGQLDVARKLFDAIRDKSVVAWNAMISGYEQNGLAGRAIEVYREMQ 198

Query: 304 ASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEME 363
            + E  +S+T V  +      G L L   +    +   +  N  +  AL  +Y+R   + 
Sbjct: 199 MAGEAPDSATFVATLSACAQAGALDLGRQVDKLIVSERMEMNVVLGAALVNMYARCGLVN 258

Query: 364 AARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACA 423
            AR+ F+   E+++ +W +MIAGY  +G   EA+ LF  M+     PN VT  ++LSACA
Sbjct: 259 KAREWFNMLQERNVVTWTSMIAGYGMHGHGGEAVKLFNLMRQQGPPPNDVTFVAVLSACA 318

Query: 424 QLGAISLGKWVHELVKS-RNFESNIYVSTALIDMYAKCGNIVEARELF--DLMSHKSEVT 480
             G +S G+     +KS       +    +++DMY + G + +A       +        
Sbjct: 319 HAGLVSEGRDAFASMKSVYGLVPRVEHYCSMVDMYGRAGLLDDAMRFIHDSIPGEPGPEV 378

Query: 481 WNTMISGYGLHGH---GLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQ 537
           W  M+    +H     G+E  +    +      PS    LS LYA S  G +   +++  
Sbjct: 379 WTAMLGACKMHKDFNLGVEVAERLIALEPES--PSHRVLLSNLYALS--GKMNHVEKVRD 434

Query: 538 SMIHDHGFKPL 548
           +MI     KP+
Sbjct: 435 TMIKRRLKKPI 445


>gi|357160830|ref|XP_003578890.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g04780-like [Brachypodium distachyon]
          Length = 631

 Score =  439 bits (1129), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 226/577 (39%), Positives = 346/577 (59%)

Query: 208 LDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELL 267
           +D ++++  L   A+ + L +G     L +  G          L++ Y+KCG  + A L+
Sbjct: 55  IDVSAISQRLQLCAKRKSLLVGKSCHGLAIHFGLVTDTLTCNILINLYTKCGRNDCARLV 114

Query: 268 FRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHL 327
           F  +    ++S N MI+GYT +G+   +L+LF ++      ++  T+   I        +
Sbjct: 115 FDIMHVRSIVSWNTMIAGYTHSGEDVQALKLFSRMHREGTHMSEFTLSSTICACAAKYAI 174

Query: 328 HLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGY 387
           +    +H+  LK  + SNS V TA+  VY++ N ++ A  +F++  E++L +W+++ AGY
Sbjct: 175 NECKQLHTIALKLALDSNSFVGTAILDVYAKCNMIKDACWVFEKMPERTLVTWSSLFAGY 234

Query: 388 TQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNI 447
            QNGL EEA+ LF+  Q   V     T+S+ILSACA L     G  +H ++    F  N 
Sbjct: 235 VQNGLHEEALHLFRCAQREGVELTEFTLSAILSACASLALKIEGIQLHAVILKCGFHGNF 294

Query: 448 YVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHS 507
           +V+ +L+D+YA+CG I +A  LF  M HK+ V WN MI+ +  H H  EA+ LF +M   
Sbjct: 295 FVAASLVDVYARCGQIEKAYALFAYMEHKNVVIWNAMIASFSRHAHSWEAMILFEKMQQL 354

Query: 508 GIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEK 567
           GI P+ VT+LSVL  CSHAGLV +G   F  ++ D   +P   HY+CMVD+LGR+G+ ++
Sbjct: 355 GIFPNEVTYLSVLSVCSHAGLVEKGRHYFSLLMSDRTVEPNVLHYSCMVDVLGRSGKTDE 414

Query: 568 ALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSA 627
           A E +  +  EP  ++WG+LLG+C  + +  LAR+A+E+LF+L+P+N G HVLLSN+Y+A
Sbjct: 415 AWELLNKMPFEPTASMWGSLLGSCRNYNNIRLARIAAEQLFQLEPDNGGNHVLLSNVYAA 474

Query: 628 ERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGK 687
             ++      R+ +K     K  G + IE  G  HVF  G++ HP+ T IY  LE++  +
Sbjct: 475 SGNWENVLMARKYLKDSGAKKEMGRSWIEAKGKVHVFVVGERKHPRITDIYNKLEEIYHE 534

Query: 688 MREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDC 747
           MR+   +T     LHDV  E+KE ++K HSEKLA++FGLI+      I I KNLR+C DC
Sbjct: 535 MRKFARRTSIECDLHDVHAEQKEELLKHHSEKLALSFGLISLPSNIPIIIHKNLRICGDC 594

Query: 748 HTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           H+  K  + +T R+++VRD NRFHHFK G CSCGD+W
Sbjct: 595 HSFMKIAAHITERLVIVRDTNRFHHFKDGSCSCGDFW 631



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 100/422 (23%), Positives = 189/422 (44%), Gaps = 49/422 (11%)

Query: 19  AKTQSQLT--QTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFN 76
           AK +S L     H   I  G   D  T   L +  +       AR +F  +    +  +N
Sbjct: 68  AKRKSLLVGKSCHGLAIHFGLVTDTLTCNILINLYTKCGRNDCARLVFDIMHVRSIVSWN 127

Query: 77  VIIRGFSNNEMPKSSICFYTHL-RKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAI 135
            +I G++++     ++  ++ + R+ T ++   FT S  + A +A    +    LH  A+
Sbjct: 128 TMIAGYTHSGEDVQALKLFSRMHREGTHMSE--FTLSSTICACAAKYAINECKQLHTIAL 185

Query: 136 VSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIW 195
                S+ FVG A++D+Y K + +K A  VF+KMPE+  V W+S+ +G ++N   ++++ 
Sbjct: 186 KLALDSNSFVGTAILDVYAKCNMIKDACWVFEKMPERTLVTWSSLFAGYVQNGLHEEALH 245

Query: 196 VFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFY 255
           +F    R G   L   +++A+L A A +     G+++  + LK GFH + +V   LV  Y
Sbjct: 246 LFRCAQREG-VELTEFTLSAILSACASLALKIEGIQLHAVILKCGFHGNFFVAASLVDVY 304

Query: 256 SKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIV 315
           ++CG++E+A  LF  +   +++  NAMI+ ++ +  +  ++ LF ++             
Sbjct: 305 ARCGQIEKAYALFAYMEHKNVVIWNAMIASFSRHAHSWEAMILFEKM------------- 351

Query: 316 GLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLF-----D 370
                                  + GI  N     ++ +V S    +E  R  F     D
Sbjct: 352 ----------------------QQLGIFPNEVTYLSVLSVCSHAGLVEKGRHYFSLLMSD 389

Query: 371 ESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISL 430
            + E ++  ++ M+    ++G T+EA  L  +M      P      S+L +C     I L
Sbjct: 390 RTVEPNVLHYSCMVDVLGRSGKTDEAWELLNKM---PFEPTASMWGSLLGSCRNYNNIRL 446

Query: 431 GK 432
            +
Sbjct: 447 AR 448


>gi|302754942|ref|XP_002960895.1| hypothetical protein SELMODRAFT_74842 [Selaginella moellendorffii]
 gi|300171834|gb|EFJ38434.1| hypothetical protein SELMODRAFT_74842 [Selaginella moellendorffii]
          Length = 903

 Score =  439 bits (1129), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 274/799 (34%), Positives = 414/799 (51%), Gaps = 52/799 (6%)

Query: 12  FLSLLKGAKTQSQLTQ---THAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARA-LFFSI 67
           FL++LK       L+Q    HA I+  G +        L H        C A A L F  
Sbjct: 131 FLAVLKACARLGDLSQGRSIHAWIVESGLKGKSVLANLLLHIYG--SCGCVASAMLLFEK 188

Query: 68  PKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKN-TALTPDNFTYSFVLSAASACCDRSI 126
            + DL  +N  I   +N +     I      R     + P   T    L+    C     
Sbjct: 189 MERDLVSWNAAI--AANAQSGDLGIALELFQRMQLEGVRPARITLVIALTV---CATIRQ 243

Query: 127 GVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMK 186
              +H     SG    L V  AL   Y +   +  A++VFD+  E+D V WN+M+    +
Sbjct: 244 AQAIHFIVRESGLEQTLVVSTALASAYARLGHLYQAKEVFDRAAERDVVSWNAMLGAYAQ 303

Query: 187 NCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVY 246
           +    ++  +F  M+  G     S S   ++ A      LR G  I    L+ G    + 
Sbjct: 304 HGHMSEAALLFARMLHEG----ISPSKVTLVNASTGCSSLRFGRMIHGCALEKGLDRDIV 359

Query: 247 VLTGLVSFYSKCGEVERAELLFRDIVRP-DLISCNAMISGYTCNGKTESSLRLFRQLLAS 305
           +   L+  Y++CG  E A  LF+ I  P + +S N MI+G +  G+ + ++ LF+++   
Sbjct: 360 LGNALLDMYTRCGSPEEARHLFKRI--PCNAVSWNTMIAGSSQKGQMKRAVELFQRM--- 414

Query: 306 AERVNSSTIVGLIPVFYPFGHLHLTNCI----------------HSFCLKSGIVSNSSVL 349
                   + G+ PV   +  L+L   +                HS  +  G  S  ++ 
Sbjct: 415 -------QLEGMAPVRATY--LNLLEAVASNPEEARAMAEGRKLHSRIVSCGYASEPAIG 465

Query: 350 TALSTVYSRLNEMEAARKLFDESS---EKSLASWNAMIAGYTQNGLTEEAISLFQEMQAS 406
           TA+  +Y+    ++ A   F   +      + SWNA+I+  +Q+G  + A+  F+ M   
Sbjct: 466 TAVVKMYASCGAIDEAAASFQRGAMEDRHDVVSWNAIISSLSQHGHGKRALGFFRRMDLH 525

Query: 407 KVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEA 466
            VAPN +T  ++L ACA   A++ G+ VH+ ++    ESN++V+TAL  MY +CG++  A
Sbjct: 526 GVAPNQITCVAVLDACAGAAALTEGEIVHDHLRHSGMESNLFVATALASMYGRCGSLESA 585

Query: 467 RELFDLMS-HKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSH 525
           RE+F+ ++  +  V +N MI+ Y  +G   EAL+LF  M   G RP   +F+SVL ACSH
Sbjct: 586 REIFEKVAVERDVVIFNAMIAAYSQNGLAGEALKLFWRMQQEGSRPDEQSFVSVLSACSH 645

Query: 526 AGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWG 585
            GL  EG EIF+SM   +G  P  +HYAC VD+LGRAG L  A E I+ + V+P   VW 
Sbjct: 646 GGLADEGWEIFRSMRQSYGIAPSEDHYACAVDVLGRAGWLADAEELIRCMDVKPTVLVWK 705

Query: 586 ALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRK 645
            LLGAC  ++D +  R+A+  + ELDP +   +V+LSNI +    + +AA VR  ++ R 
Sbjct: 706 TLLGACRKYRDVDRGRLANSMVRELDPGDESAYVVLSNILAGAGKWDEAAEVRTEMESRG 765

Query: 646 LAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVE 705
           L K  G + IE+    H F +GD+ HP+S  IY  LE+L+ ++RE G+  +T   L  V+
Sbjct: 766 LRKEAGKSWIEIKSRVHEFVAGDRSHPRSEEIYRELERLHAEIREIGYVPDTRLVLRKVD 825

Query: 706 EEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVR 765
           E EKE ++  HSE+LAIA G++++   T +R++KNLRVC DCH ATKFISK+  + IVVR
Sbjct: 826 EAEKERLLCQHSERLAIALGVMSSSTDT-VRVMKNLRVCEDCHNATKFISKIVNKEIVVR 884

Query: 766 DANRFHHFKGGVCSCGDYW 784
           D +RFHHF  G CSCGDYW
Sbjct: 885 DTHRFHHFVDGSCSCGDYW 903



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 117/390 (30%), Positives = 195/390 (50%), Gaps = 9/390 (2%)

Query: 133 HAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQD 192
           HA +   G +  +G  L+ LY K   +    +VF ++  +D   W ++I+   ++   + 
Sbjct: 52  HARIVSLGLEEELGNHLLRLYLKCESLGDVEEVFSRLEVRDEASWTTIITAYTEHGQAKR 111

Query: 193 SIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLV 252
           +I +F  M +  G   D+ +  AVL A A + +L  G  I    ++ G      +   L+
Sbjct: 112 AIGMFHRM-QQEGVRCDAVTFLAVLKACARLGDLSQGRSIHAWIVESGLKGKSVLANLLL 170

Query: 253 SFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSS 312
             Y  CG V  A LLF  + R DL+S NA I+    +G    +L LF+++     R    
Sbjct: 171 HIYGSCGCVASAMLLFEKMER-DLVSWNAAIAANAQSGDLGIALELFQRMQLEGVRPARI 229

Query: 313 TIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDES 372
           T+V  + V      +     IH    +SG+     V TAL++ Y+RL  +  A+++FD +
Sbjct: 230 TLVIALTVCAT---IRQAQAIHFIVRESGLEQTLVVSTALASAYARLGHLYQAKEVFDRA 286

Query: 373 SEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGK 432
           +E+ + SWNAM+  Y Q+G   EA  LF  M    ++P+ VT+ +  + C+ L     G+
Sbjct: 287 AERDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGISPSKVTLVNASTGCSSL---RFGR 343

Query: 433 WVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHG 492
            +H     +  + +I +  AL+DMY +CG+  EAR LF  +   + V+WNTMI+G    G
Sbjct: 344 MIHGCALEKGLDRDIVLGNALLDMYTRCGSPEEARHLFKRIPCNA-VSWNTMIAGSSQKG 402

Query: 493 HGLEALQLFSEMLHSGIRPSGVTFLSVLYA 522
               A++LF  M   G+ P   T+L++L A
Sbjct: 403 QMKRAVELFQRMQLEGMAPVRATYLNLLEA 432



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 96/301 (31%), Positives = 151/301 (50%), Gaps = 10/301 (3%)

Query: 224 QELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMI 283
           Q  R+   I  LGL+    +H      L+  Y KC  +   E +F  +   D  S   +I
Sbjct: 47  QGRRIHARIVSLGLEEELGNH------LLRLYLKCESLGDVEEVFSRLEVRDEASWTTII 100

Query: 284 SGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIV 343
           + YT +G+ + ++ +F ++     R ++ T + ++      G L     IH++ ++SG+ 
Sbjct: 101 TAYTEHGQAKRAIGMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRSIHAWIVESGLK 160

Query: 344 SNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEM 403
             S +   L  +Y     + +A  LF E  E+ L SWNA IA   Q+G    A+ LFQ M
Sbjct: 161 GKSVLANLLLHIYGSCGCVASAMLLF-EKMERDLVSWNAAIAANAQSGDLGIALELFQRM 219

Query: 404 QASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNI 463
           Q   V P  +T+   L+ CA    I   + +H +V+    E  + VSTAL   YA+ G++
Sbjct: 220 QLEGVRPARITLVIALTVCA---TIRQAQAIHFIVRESGLEQTLVVSTALASAYARLGHL 276

Query: 464 VEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYAC 523
            +A+E+FD  + +  V+WN M+  Y  HGH  EA  LF+ MLH GI PS VT ++    C
Sbjct: 277 YQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGISPSKVTLVNASTGC 336

Query: 524 S 524
           S
Sbjct: 337 S 337



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 67/243 (27%), Positives = 111/243 (45%), Gaps = 6/243 (2%)

Query: 352 LSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPN 411
           L  +Y +   +    ++F     +  ASW  +I  YT++G  + AI +F  MQ   V  +
Sbjct: 68  LLRLYLKCESLGDVEEVFSRLEVRDEASWTTIITAYTEHGQAKRAIGMFHRMQQEGVRCD 127

Query: 412 PVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFD 471
            VT  ++L ACA+LG +S G+ +H  +     +    ++  L+ +Y  CG +  A  LF+
Sbjct: 128 AVTFLAVLKACARLGDLSQGRSIHAWIVESGLKGKSVLANLLLHIYGSCGCVASAMLLFE 187

Query: 472 LMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVRE 531
            M  +  V+WN  I+     G    AL+LF  M   G+RP+ +T +  L  C+    +R+
Sbjct: 188 KM-ERDLVSWNAAIAANAQSGDLGIALELFQRMQLEGVRPARITLVIALTVCA---TIRQ 243

Query: 532 GDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGAC 591
              I   ++ + G +        +     R G L +A E     A E     W A+LGA 
Sbjct: 244 AQAI-HFIVRESGLEQTLVVSTALASAYARLGHLYQAKEVFD-RAAERDVVSWNAMLGAY 301

Query: 592 MIH 594
             H
Sbjct: 302 AQH 304


>gi|115471325|ref|NP_001059261.1| Os07g0239600 [Oryza sativa Japonica Group]
 gi|33146689|dbj|BAC80084.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|50510012|dbj|BAD30625.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113610797|dbj|BAF21175.1| Os07g0239600 [Oryza sativa Japonica Group]
          Length = 720

 Score =  439 bits (1129), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 241/672 (35%), Positives = 369/672 (54%), Gaps = 34/672 (5%)

Query: 147 AALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGT 206
           A+++  + +      AR VFD+ P +   +W   ISG  +   + D +  F +M+  G  
Sbjct: 49  ASVLRFWVRRRRFHDARGVFDERPTRTAPVWTLTISGCARRGRYADGMRAFAEMLAEGEA 108

Query: 207 WLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAEL 266
             ++  +AAV+   A + ++  G  +    L+ G H  V +   ++  Y+KCG+ ERA  
Sbjct: 109 TPNAFVLAAVVRCCAGMGDVESGKRVHGWMLRNGVHLDVVLCNAVLDMYAKCGQFERARR 168

Query: 267 LFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLI-------- 318
           +F  +   D +S N  I     +G    S++LF +         ++ I GL+        
Sbjct: 169 VFGAMAERDAVSWNIAIGACIQSGDILGSMQLFDESPLRDTTSWNTIISGLMRSGHAADA 228

Query: 319 --------------------PVFYPFGHLHLTNC---IHSFCLKSGIVSNSSVLTALSTV 355
                                 F   G L L +    +H   L + +  ++ V ++L  +
Sbjct: 229 LSHLRRMAQAGVVFNHYTYSTAFVLAGMLLLPDLGRQLHGRVLIAALEGDAFVRSSLMDM 288

Query: 356 YSRLNEMEAARKLFDESSEKSLA---SWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNP 412
           Y +   +EAA  +FD  S  +     +W+ M+AGY QNG  EEA+ LF+ M    VA + 
Sbjct: 289 YCKCGLLEAAASVFDHWSPLTRDMNFAWSTMVAGYVQNGREEEALDLFRRMLREGVAADR 348

Query: 413 VTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDL 472
            T++S+ +ACA +G +  G+ VH  V+   ++ +  +++A++DMYAKCGN+ +AR +FD 
Sbjct: 349 FTLTSVAAACANVGMVEQGRQVHGCVEKLWYKLDAPLASAIVDMYAKCGNLEDARSIFDR 408

Query: 473 MSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREG 532
              K+   W +M+  Y  HG G  A++LF  M    + P+ +T + VL ACSH GLV EG
Sbjct: 409 ACTKNIAVWTSMLCSYASHGQGRIAIELFERMTAEKMTPNEITLVGVLSACSHVGLVSEG 468

Query: 533 DEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACM 592
           +  F+ M  ++G  P  EHY C+VD+ GR+G L+KA  FI+   +     VW  LL AC 
Sbjct: 469 ELYFKQMQEEYGIVPSIEHYNCIVDLYGRSGLLDKAKNFIEENNINHEAIVWKTLLSACR 528

Query: 593 IHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGC 652
           +H+    A++ASEKL +L+  + G +V+LSNIY+    +     +R  +++RK+ K PG 
Sbjct: 529 LHQHNEYAKLASEKLVQLEQCDAGSYVMLSNIYATNNKWHDTFELRVSMQERKVRKQPGR 588

Query: 653 TLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELM 712
           + I +  T H F +GD  HPQS  IYA LEKL  +++E G+ + T   +HDVE+E++E  
Sbjct: 589 SWIHLKNTVHTFVAGDASHPQSAEIYAYLEKLVERLKEIGYTSRTDLVVHDVEDEQRETA 648

Query: 713 MKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHH 772
           +K HSEKLAIAFG+I+T  GT +RI KNLRVC DCH A K+IS  TGR IVVRD  RFHH
Sbjct: 649 LKFHSEKLAIAFGIISTPSGTPLRIFKNLRVCEDCHEAIKYISLATGREIVVRDLYRFHH 708

Query: 773 FKGGVCSCGDYW 784
           FK   CSC D+W
Sbjct: 709 FKDASCSCEDFW 720



 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 122/487 (25%), Positives = 219/487 (44%), Gaps = 48/487 (9%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           AR +F   P     ++ + I G +        +  +  +      TP+    +FVL+A  
Sbjct: 64  ARGVFDERPTRTAPVWTLTISGCARRGRYADGMRAFAEMLAEGEATPN----AFVLAAVV 119

Query: 120 ACC----DRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKD-- 173
            CC    D   G  +HG  + +G   D+ +  A++D+Y K    + AR+VF  M E+D  
Sbjct: 120 RCCAGMGDVESGKRVHGWMLRNGVHLDVVLCNAVLDMYAKCGQFERARRVFGAMAERDAV 179

Query: 174 -----------------------------TVLWNSMISGLMKNCCFQDSIWVFGDMVRNG 204
                                        T  WN++ISGLM++    D++     M + G
Sbjct: 180 SWNIAIGACIQSGDILGSMQLFDESPLRDTTSWNTIISGLMRSGHAADALSHLRRMAQAG 239

Query: 205 GTWLDST-SVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVER 263
             +   T S A VL  +  + +  LG ++    L        +V + L+  Y KCG +E 
Sbjct: 240 VVFNHYTYSTAFVLAGMLLLPD--LGRQLHGRVLIAALEGDAFVRSSLMDMYCKCGLLEA 297

Query: 264 AELLF---RDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPV 320
           A  +F     + R    + + M++GY  NG+ E +L LFR++L      +  T+  +   
Sbjct: 298 AASVFDHWSPLTRDMNFAWSTMVAGYVQNGREEEALDLFRRMLREGVAADRFTLTSVAAA 357

Query: 321 FYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASW 380
               G +     +H    K     ++ + +A+  +Y++   +E AR +FD +  K++A W
Sbjct: 358 CANVGMVEQGRQVHGCVEKLWYKLDAPLASAIVDMYAKCGNLEDARSIFDRACTKNIAVW 417

Query: 381 NAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGK-WVHELVK 439
            +M+  Y  +G    AI LF+ M A K+ PN +T+  +LSAC+ +G +S G+ +  ++ +
Sbjct: 418 TSMLCSYASHGQGRIAIELFERMTAEKMTPNEITLVGVLSACSHVGLVSEGELYFKQMQE 477

Query: 440 SRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSE-VTWNTMISGYGLHGHGLEAL 498
                 +I     ++D+Y + G + +A+   +  +   E + W T++S   LH H  E  
Sbjct: 478 EYGIVPSIEHYNCIVDLYGRSGLLDKAKNFIEENNINHEAIVWKTLLSACRLHQHN-EYA 536

Query: 499 QLFSEML 505
           +L SE L
Sbjct: 537 KLASEKL 543


>gi|15232648|ref|NP_190263.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207666|sp|Q9STF3.1|PP265_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g46790, chloroplastic; AltName: Full=Protein
           CHLORORESPIRATORY REDUCTION 2; Flags: Precursor
 gi|5541680|emb|CAB51186.1| putative protein [Arabidopsis thaliana]
 gi|110741961|dbj|BAE98921.1| hypothetical protein [Arabidopsis thaliana]
 gi|332644684|gb|AEE78205.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 657

 Score =  439 bits (1129), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 226/545 (41%), Positives = 331/545 (60%), Gaps = 6/545 (1%)

Query: 246 YVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQL--- 302
           ++ T L+  YS  G V+ A  +F    +  +   NA+    T  G  E  L L+ ++   
Sbjct: 113 FLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRI 172

Query: 303 -LASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNE 361
            + S     +  +   +       HL     IH+   + G  S+  ++T L  +Y+R   
Sbjct: 173 GVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGC 232

Query: 362 MEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEM--QASKVAPNPVTVSSIL 419
           ++ A  +F     +++ SW+AMIA Y +NG   EA+  F+EM  +    +PN VT+ S+L
Sbjct: 233 VDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVL 292

Query: 420 SACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEV 479
            ACA L A+  GK +H  +  R  +S + V +AL+ MY +CG +   + +FD M  +  V
Sbjct: 293 QACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVV 352

Query: 480 TWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSM 539
           +WN++IS YG+HG+G +A+Q+F EML +G  P+ VTF+SVL ACSH GLV EG  +F++M
Sbjct: 353 SWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETM 412

Query: 540 IHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNL 599
             DHG KP  EHYACMVD+LGRA +L++A + ++ +  EPGP VWG+LLG+C IH +  L
Sbjct: 413 WRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVEL 472

Query: 600 ARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGG 659
           A  AS +LF L+P+N G +VLL++IY+  + + +   V+++++ R L K PG   +EV  
Sbjct: 473 AERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQKLPGRCWMEVRR 532

Query: 660 TPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEK 719
             + F S D+ +P    I+A L KL   M+E G+  +T   L+++E EEKE ++  HSEK
Sbjct: 533 KMYSFVSVDEFNPLMEQIHAFLVKLAEDMKEKGYIPQTKGVLYELETEEKERIVLGHSEK 592

Query: 720 LAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCS 779
           LA+AFGLI T  G  IRI KNLR+C DCH  TKFISK   + I+VRD NRFH FK GVCS
Sbjct: 593 LALAFGLINTSKGEPIRITKNLRLCEDCHLFTKFISKFMEKEILVRDVNRFHRFKNGVCS 652

Query: 780 CGDYW 784
           CGDYW
Sbjct: 653 CGDYW 657



 Score =  176 bits (447), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 112/424 (26%), Positives = 211/424 (49%), Gaps = 13/424 (3%)

Query: 82  FSNNEMPKSSICFYTHLRKNTAL-----TPDNFTYSFVLSAASACCDRSIGVLLHGHAIV 136
            SNN++ +S +C    L++   +     +P   TY  ++         S  + +H H + 
Sbjct: 47  ISNNQLIQS-LCKEGKLKQAIRVLSQESSPSQQTYELLILCCGHRSSLSDALRVHRHILD 105

Query: 137 SGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWV 196
           +G   D F+   L+ +Y     V  ARKVFDK  ++   +WN++   L      ++ + +
Sbjct: 106 NGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGL 165

Query: 197 FGDMVRNG---GTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVS 253
           +  M R G     +  +  + A + +   V  L  G EI     + G+  HVY++T LV 
Sbjct: 166 YWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVD 225

Query: 254 FYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAE--RVNS 311
            Y++ G V+ A  +F  +   +++S +AMI+ Y  NGK   +LR FR+++   +    NS
Sbjct: 226 MYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNS 285

Query: 312 STIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDE 371
            T+V ++        L     IH + L+ G+ S   V++AL T+Y R  ++E  +++FD 
Sbjct: 286 VTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDR 345

Query: 372 SSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLG 431
             ++ + SWN++I+ Y  +G  ++AI +F+EM A+  +P PVT  S+L AC+  G +  G
Sbjct: 346 MHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEG 405

Query: 432 KWVHE-LVKSRNFESNIYVSTALIDMYAKCGNIVEARELF-DLMSHKSEVTWNTMISGYG 489
           K + E + +    +  I     ++D+  +   + EA ++  D+ +      W +++    
Sbjct: 406 KRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCR 465

Query: 490 LHGH 493
           +HG+
Sbjct: 466 IHGN 469



 Score =  135 bits (340), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 114/467 (24%), Positives = 202/467 (43%), Gaps = 56/467 (11%)

Query: 23  SQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGF 82
           S   + H  I+ +G   D    TKL    SD  +  YAR +F    K  ++++N + R  
Sbjct: 94  SDALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRAL 153

Query: 83  SNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSA--ASACCDRSI--GVLLHGHAIVSG 138
           +     +  +  Y  + +   +  D FTY++VL A  AS C    +  G  +H H    G
Sbjct: 154 TLAGHGEEVLGLYWKMNR-IGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRG 212

Query: 139 YGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFG 198
           Y S +++   LVD+Y +F  V  A  VF  MP ++ V W++MI+   KN    +++  F 
Sbjct: 213 YSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFR 272

Query: 199 DMVR-NGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSK 257
           +M+R    +  +S ++ +VL A A +  L  G  I    L+ G    + V++ LV+ Y +
Sbjct: 273 EMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGR 332

Query: 258 CGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGL 317
           CG++E  + +F  +   D++S N++IS Y  +G  + ++++F ++LA+       T V +
Sbjct: 333 CGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSV 392

Query: 318 IPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLF-----DES 372
           +                  C   G+V                   E  ++LF     D  
Sbjct: 393 LGA----------------CSHEGLV-------------------EEGKRLFETMWRDHG 417

Query: 373 SEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGK 432
            +  +  +  M+    +    +EA  + Q+M   +  P P    S+L +C   G + L  
Sbjct: 418 IKPQIEHYACMVDLLGRANRLDEAAKMVQDM---RTEPGPKVWGSLLGSCRIHGNVELA- 473

Query: 433 WVHELVKSRNF---ESNIYVSTALIDMYAKCGNIVEARELFDLMSHK 476
              E    R F     N      L D+YA+     E + +  L+ H+
Sbjct: 474 ---ERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHR 517



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 52/215 (24%), Positives = 96/215 (44%), Gaps = 11/215 (5%)

Query: 381 NAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKS 440
           N +I    + G  ++AI +  +    + +P+  T   ++  C    ++S    VH  +  
Sbjct: 50  NQLIQSLCKEGKLKQAIRVLSQ----ESSPSQQTYELLILCCGHRSSLSDALRVHRHILD 105

Query: 441 RNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQL 500
              + + +++T LI MY+  G++  AR++FD    ++   WN +     L GHG E L L
Sbjct: 106 NGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGL 165

Query: 501 FSEMLHSGIRPSGVTFLSVLYACSHA----GLVREGDEIFQSMIHDHGFKPLAEHYACMV 556
           + +M   G+     T+  VL AC  +      + +G EI  + +   G+         +V
Sbjct: 166 YWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEI-HAHLTRRGYSSHVYIMTTLV 224

Query: 557 DILGRAGQLEKALEFIKGLAVEPGPAVWGALLGAC 591
           D+  R G ++ A     G+ V      W A++ AC
Sbjct: 225 DMYARFGCVDYASYVFGGMPVR-NVVSWSAMI-AC 257


>gi|147780302|emb|CAN70248.1| hypothetical protein VITISV_032008 [Vitis vinifera]
          Length = 679

 Score =  439 bits (1128), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 245/665 (36%), Positives = 376/665 (56%), Gaps = 31/665 (4%)

Query: 106 PDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSA--- 162
           PD+  +  VL + +   D   G  +HG  I  G G DL+   AL+++Y KF  ++     
Sbjct: 8   PDHNVFPSVLKSCTLMKDLRFGESVHGCIIRLGMGFDLYTCNALMNMYSKFWSLEEGGVQ 67

Query: 163 ----RKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLP 218
                K+   +PE   +   S    L   C   + +     + +NG    D   ++ +L 
Sbjct: 68  RFCDSKMLGGIPEPREIGKCSNSHDL--PCELDERV---AGIDQNG----DLNQMSNILY 118

Query: 219 AVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLIS 278
            V   +++             G    VY      S+Y   G + +   +F  + + D++S
Sbjct: 119 QVNTYKKV----------FDEGKTSDVYSKKEKESYY--LGSLRK---VFEMMPKRDIVS 163

Query: 279 CNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCL 338
            N +ISG   NG  E +L + R++  +  R +S T+  ++P+F  + +L     IH + +
Sbjct: 164 WNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPIFAEYVNLLKGKEIHGYAI 223

Query: 339 KSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAIS 398
           ++G  ++  + ++L  +Y++   ++ + ++F    +    SWN++IAG  QNG+ +E + 
Sbjct: 224 RNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIAGCVQNGMFDEGLK 283

Query: 399 LFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYA 458
            FQ+M  +K+ PN V+ SSI+ ACA L  + LGK +H  +    F+ N+++++AL+DMYA
Sbjct: 284 FFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRFDGNVFIASALVDMYA 343

Query: 459 KCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLS 518
           KCGNI  AR +FD M     V+W  MI GY LHGH  +A+ LF  M   G++P+ V F++
Sbjct: 344 KCGNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISLFKRMEVEGVKPNYVAFMA 403

Query: 519 VLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVE 578
           VL ACSHAGLV E  + F SM  D+   P  EHYA + D+LGR G+LE+A EFI  + +E
Sbjct: 404 VLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYAAVADLLGRVGRLEEAYEFISDMHIE 463

Query: 579 PGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVR 638
           P  +VW  LL AC +HK+  LA   S+KLF +DP+N+G +VLLSNIYSA   +  A  +R
Sbjct: 464 PTGSVWSTLLAACRVHKNIELAEKVSKKLFTVDPQNIGAYVLLSNIYSAAGRWKDARKLR 523

Query: 639 QVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETV 698
             ++ + + K P C+ IE+    H F +GD+ HP    I   L+ L  +M   G+  +T 
Sbjct: 524 IAMRDKGMKKKPACSWIEIKNKVHAFVAGDKSHPYYDRINEALKVLLEQMEREGYVLDTT 583

Query: 699 TALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVT 758
             LHDVEEE+K  ++  HSE+LAI FG+I+T  GT IR+ KNLRVC+DCHTATKFISK+ 
Sbjct: 584 EVLHDVEEEQKRYLLCSHSERLAITFGIISTPAGTTIRVTKNLRVCVDCHTATKFISKIV 643

Query: 759 GRVIV 763
           GR IV
Sbjct: 644 GREIV 648



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 110/416 (26%), Positives = 200/416 (48%), Gaps = 36/416 (8%)

Query: 61  RALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASA 120
           R +F  +PK D+  +N +I G + N M + ++     +  N  L PD+FT S VL   + 
Sbjct: 150 RKVFEMMPKRDIVSWNTVISGNAQNGMHEDALMMVREM-GNADLRPDSFTLSSVLPIFAE 208

Query: 121 CCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSM 180
             +   G  +HG+AI +GY +D+F+G++L+D+Y K + V  + +VF  +P+ D + WNS+
Sbjct: 209 YVNLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSI 268

Query: 181 ISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLG 240
           I+G ++N  F + +  F  M+       +  S ++++PA A +  L LG ++    ++  
Sbjct: 269 IAGCVQNGMFDEGLKFFQQMLI-AKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSR 327

Query: 241 FHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFR 300
           F  +V++ + LV  Y+KCG +  A  +F  +   D++S  AMI GY  +G    ++ LF+
Sbjct: 328 FDGNVFIASALVDMYAKCGNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISLFK 387

Query: 301 QLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLN 360
           ++           + G+ P +  F  + LT C H     +G+V  +         +   N
Sbjct: 388 RM----------EVEGVKPNYVAFMAV-LTACSH-----AGLVDEA---------WKYFN 422

Query: 361 EMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILS 420
            M    ++        L  + A+     + G  EEA     +M    + P     S++L+
Sbjct: 423 SMTQDYRII-----PGLEHYAAVADLLGRVGRLEEAYEFISDMH---IEPTGSVWSTLLA 474

Query: 421 ACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHK 476
           AC     I L + V + + + +   NI     L ++Y+  G   +AR+L   M  K
Sbjct: 475 ACRVHKNIELAEKVSKKLFTVD-PQNIGAYVLLSNIYSAAGRWKDARKLRIAMRDK 529


>gi|224124578|ref|XP_002330058.1| predicted protein [Populus trichocarpa]
 gi|222871483|gb|EEF08614.1| predicted protein [Populus trichocarpa]
          Length = 568

 Score =  439 bits (1128), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 237/645 (36%), Positives = 355/645 (55%), Gaps = 95/645 (14%)

Query: 153 YFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMV-RNGGTWLDST 211
           YF+    + ARK+FDKMPE +T+ WN ++SG ++N    ++  VF  M  RN  +W    
Sbjct: 4   YFQNKRPREARKLFDKMPETNTISWNGLVSGYVQNGMISEARKVFDKMPERNVVSW---- 59

Query: 212 SVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDI 271
                                                T ++  Y + G +E AELLF  +
Sbjct: 60  -------------------------------------TAMIRGYVQEGLIEEAELLFWRM 82

Query: 272 VRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTN 331
              +++S   M+ G   +G+ + + +LF  ++   + V S                  TN
Sbjct: 83  PERNVVSWTVMLGGLIEDGRVDEARQLF-DMMPVKDVVAS------------------TN 123

Query: 332 CIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAG----- 386
            I   C +  ++                     AR++FDE  ++++ +W +MI+G     
Sbjct: 124 MIDGLCSEGRLIE--------------------AREIFDEMPQRNVVAWTSMISGEKDDG 163

Query: 387 --------YTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELV 438
                   Y + G   EA++LF  MQ   V P+  +V S+LS C  L ++  G+ VH  +
Sbjct: 164 TWSTMIKIYERKGFELEALALFSLMQREGVRPSFPSVISVLSVCGSLASLDHGRQVHSQL 223

Query: 439 KSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEAL 498
               F+ +IYVS+ LI MY KCG++V A+ +FD  S K  V WN++I+GY  HG G +AL
Sbjct: 224 VRSQFDIDIYVSSVLITMYIKCGDLVTAKRVFDRFSSKDIVMWNSIIAGYAQHGFGEKAL 283

Query: 499 QLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDI 558
           ++F +M  S I P  +TF+ VL ACS+ G V+EG EIF+SM   +   P  EHYACMVD+
Sbjct: 284 EVFHDMFSSSIAPDEITFIGVLSACSYTGKVKEGLEIFESMKSKYQVDPKTEHYACMVDL 343

Query: 559 LGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYH 618
           LGRAG+L +A+  I+ + VE    VWGALLGAC  HK+ +LA +A++KL +L+P N G +
Sbjct: 344 LGRAGKLNEAMNLIENMPVEADAIVWGALLGACRTHKNLDLAEIAAKKLLQLEPNNAGPY 403

Query: 619 VLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQL-HPQSTAI 677
           +LLSN+YS++  +     +R+ ++ + L K+PGC+ IEV    H+F+ G    HP+   I
Sbjct: 404 ILLSNLYSSQSRWKDVVELRKTMRAKNLRKSPGCSWIEVDKKVHIFSGGGSTSHPEHEMI 463

Query: 678 YAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRI 737
              L KL   +REAG+  +    +HDV+EEEK   ++ HSEKLA+A+GL+    G  IR+
Sbjct: 464 LKKLGKLGALLREAGYCPDGSFVMHDVDEEEKVHSLRDHSEKLAVAYGLLKVPEGMPIRV 523

Query: 738 IKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGD 782
           +KNLRVC D H+  K I++VTGR I++RD NRFHHFK G+CSC D
Sbjct: 524 MKNLRVCGDSHSTIKLIAQVTGREIILRDTNRFHHFKDGLCSCSD 568



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 90/360 (25%), Positives = 169/360 (46%), Gaps = 26/360 (7%)

Query: 148 ALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMV-RNGGT 206
            LV  Y +   +  ARKVFDKMPE++ V W +MI G ++    +++  +F  M  RN  +
Sbjct: 30  GLVSGYVQNGMISEARKVFDKMPERNVVSWTAMIRGYVQEGLIEEAELLFWRMPERNVVS 89

Query: 207 WLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAEL 266
           W   T +   L     V E R   ++  +         V   T ++      G +  A  
Sbjct: 90  W---TVMLGGLIEDGRVDEARQLFDMMPV-------KDVVASTNMIDGLCSEGRLIEARE 139

Query: 267 LFRDIVRPDLISCNAMISG-------------YTCNGKTESSLRLFRQLLASAERVNSST 313
           +F ++ + ++++  +MISG             Y   G    +L LF  +     R +  +
Sbjct: 140 IFDEMPQRNVVAWTSMISGEKDDGTWSTMIKIYERKGFELEALALFSLMQREGVRPSFPS 199

Query: 314 IVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESS 373
           ++ ++ V      L     +HS  ++S    +  V + L T+Y +  ++  A+++FD  S
Sbjct: 200 VISVLSVCGSLASLDHGRQVHSQLVRSQFDIDIYVSSVLITMYIKCGDLVTAKRVFDRFS 259

Query: 374 EKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKW 433
            K +  WN++IAGY Q+G  E+A+ +F +M +S +AP+ +T   +LSAC+  G +  G  
Sbjct: 260 SKDIVMWNSIIAGYAQHGFGEKALEVFHDMFSSSIAPDEITFIGVLSACSYTGKVKEGLE 319

Query: 434 VHELVKSR-NFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSE-VTWNTMISGYGLH 491
           + E +KS+   +        ++D+  + G + EA  L + M  +++ + W  ++     H
Sbjct: 320 IFESMKSKYQVDPKTEHYACMVDLLGRAGKLNEAMNLIENMPVEADAIVWGALLGACRTH 379



 Score = 63.2 bits (152), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 44/185 (23%), Positives = 86/185 (46%), Gaps = 13/185 (7%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTH------------LRKNTALTPD 107
           AR +F  +P+ ++  +  +I G  ++    + I  Y              L +   + P 
Sbjct: 137 AREIFDEMPQRNVVAWTSMISGEKDDGTWSTMIKIYERKGFELEALALFSLMQREGVRPS 196

Query: 108 NFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFD 167
             +   VLS   +      G  +H   + S +  D++V + L+ +Y K   + +A++VFD
Sbjct: 197 FPSVISVLSVCGSLASLDHGRQVHSQLVRSQFDIDIYVSSVLITMYIKCGDLVTAKRVFD 256

Query: 168 KMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELR 227
           +   KD V+WNS+I+G  ++   + ++ VF DM  +     D  +   VL A +   +++
Sbjct: 257 RFSSKDIVMWNSIIAGYAQHGFGEKALEVFHDMF-SSSIAPDEITFIGVLSACSYTGKVK 315

Query: 228 LGMEI 232
            G+EI
Sbjct: 316 EGLEI 320


>gi|302776474|ref|XP_002971398.1| hypothetical protein SELMODRAFT_95698 [Selaginella moellendorffii]
 gi|300160530|gb|EFJ27147.1| hypothetical protein SELMODRAFT_95698 [Selaginella moellendorffii]
          Length = 562

 Score =  438 bits (1127), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 231/548 (42%), Positives = 314/548 (57%), Gaps = 3/548 (0%)

Query: 240 GFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLF 299
           GFH       GLVS Y+KCG ++ A  +F  I+   ++S +AMI  Y  +G+ + +L LF
Sbjct: 15  GFHRATIAQNGLVSMYAKCGCLDEARAIFNGILERTVVSWSAMIGAYALHGRGQEALLLF 74

Query: 300 RQLLASAE-RVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIV--SNSSVLTALSTVY 356
            ++        N+ T  G+         L     IH+  + SG +  SN+ +  AL  +Y
Sbjct: 75  HRMRNDGRVEPNAMTFTGVFNACGVIEDLEQGREIHALAMASGELKSSNAILENALLNMY 134

Query: 357 SRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVS 416
            R   +E ARK+FD        SW +MI   T+N    EA+ LF  M    + P  VT++
Sbjct: 135 VRCGSLEEARKVFDTMDHPDAFSWTSMITACTENCELLEALELFHRMNLEGIPPTSVTLA 194

Query: 417 SILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHK 476
           S+L+ACA  GA+ +GK +H  + +  F S++   TAL+DMYAKCG++  + ++F  M  +
Sbjct: 195 SVLNACACSGALKVGKQIHSRLDASGFHSSVLAQTALLDMYAKCGSLECSSKVFTAMETR 254

Query: 477 SEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIF 536
           + V+W  MI+    HG G EAL+LF EM   G+     TF+ VL ACSHAGL++E  E F
Sbjct: 255 NSVSWTAMIAALAQHGQGDEALELFKEMNLEGMVADATTFICVLRACSHAGLIKESLEFF 314

Query: 537 QSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKD 596
            SM+ D+   P   HY   +D +GRAG+L+ A E I  +   P    W  LL AC IH  
Sbjct: 315 HSMVEDYAIAPTETHYCRALDTIGRAGRLQDAEELIHSMPFHPETLTWKTLLNACRIHSQ 374

Query: 597 TNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIE 656
              A   +E L +L PE+   + LL N+Y+A   Y     VR+ +  R L K PG + IE
Sbjct: 375 AERATKVAELLSKLAPEDSMAYTLLGNVYAATGRYGDQMRVRKGMTDRGLKKVPGKSFIE 434

Query: 657 VGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVH 716
           V    H F +GD+ HP    I   LEKL G+MREAG+   T   LH V EEEKE ++ +H
Sbjct: 435 VKNKVHEFVAGDRAHPSRDEILLELEKLGGRMREAGYVPNTKDVLHAVNEEEKEQLIGLH 494

Query: 717 SEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGG 776
           SEKLAIAFGLIAT PGT + I+KNLRVC DCH ATK I+K+  R IVVRD +RFHHF+ G
Sbjct: 495 SEKLAIAFGLIATPPGTPLLIVKNLRVCSDCHAATKVIAKIMRRRIVVRDTHRFHHFEDG 554

Query: 777 VCSCGDYW 784
            CSC DYW
Sbjct: 555 QCSCKDYW 562



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 80/265 (30%), Positives = 136/265 (51%), Gaps = 5/265 (1%)

Query: 333 IHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGL 392
           IHS     G    +     L ++Y++   ++ AR +F+   E+++ SW+AMI  Y  +G 
Sbjct: 7   IHSRLSLCGFHRATIAQNGLVSMYAKCGCLDEARAIFNGILERTVVSWSAMIGAYALHGR 66

Query: 393 TEEAISLFQEMQAS-KVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRN--FESNIYV 449
            +EA+ LF  M+   +V PN +T + + +AC  +  +  G+ +H L  +      SN  +
Sbjct: 67  GQEALLLFHRMRNDGRVEPNAMTFTGVFNACGVIEDLEQGREIHALAMASGELKSSNAIL 126

Query: 450 STALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGI 509
             AL++MY +CG++ EAR++FD M H    +W +MI+    +   LEAL+LF  M   GI
Sbjct: 127 ENALLNMYVRCGSLEEARKVFDTMDHPDAFSWTSMITACTENCELLEALELFHRMNLEGI 186

Query: 510 RPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKAL 569
            P+ VT  SVL AC+ +G ++ G +I  S +   GF         ++D+  + G LE + 
Sbjct: 187 PPTSVTLASVLNACACSGALKVGKQI-HSRLDASGFHSSVLAQTALLDMYAKCGSLECSS 245

Query: 570 EFIKGLAVEPGPAVWGALLGACMIH 594
           +    +        W A++ A   H
Sbjct: 246 KVFTAMETR-NSVSWTAMIAALAQH 269



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 68/258 (26%), Positives = 130/258 (50%), Gaps = 3/258 (1%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           ARA+F  I +  +  ++ +I  ++ +   + ++  +  +R +  + P+  T++ V +A  
Sbjct: 39  ARAIFNGILERTVVSWSAMIGAYALHGRGQEALLLFHRMRNDGRVEPNAMTFTGVFNACG 98

Query: 120 ACCDRSIGVLLHGHAIVSG--YGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLW 177
              D   G  +H  A+ SG    S+  +  AL+++Y +   ++ ARKVFD M   D   W
Sbjct: 99  VIEDLEQGREIHALAMASGELKSSNAILENALLNMYVRCGSLEEARKVFDTMDHPDAFSW 158

Query: 178 NSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGL 237
            SMI+   +NC   +++ +F  M   G     S ++A+VL A A    L++G +I     
Sbjct: 159 TSMITACTENCELLEALELFHRMNLEG-IPPTSVTLASVLNACACSGALKVGKQIHSRLD 217

Query: 238 KLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLR 297
             GFH  V   T L+  Y+KCG +E +  +F  +   + +S  AMI+    +G+ + +L 
Sbjct: 218 ASGFHSSVLAQTALLDMYAKCGSLECSSKVFTAMETRNSVSWTAMIAALAQHGQGDEALE 277

Query: 298 LFRQLLASAERVNSSTIV 315
           LF+++       +++T +
Sbjct: 278 LFKEMNLEGMVADATTFI 295



 Score = 79.0 bits (193), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 50/163 (30%), Positives = 79/163 (48%), Gaps = 3/163 (1%)

Query: 431 GKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGL 490
           G+ +H  +    F         L+ MYAKCG + EAR +F+ +  ++ V+W+ MI  Y L
Sbjct: 4   GRRIHSRLSLCGFHRATIAQNGLVSMYAKCGCLDEARAIFNGILERTVVSWSAMIGAYAL 63

Query: 491 HGHGLEALQLFSEMLHSG-IRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPL- 548
           HG G EAL LF  M + G + P+ +TF  V  AC     + +G EI    +     K   
Sbjct: 64  HGRGQEALLLFHRMRNDGRVEPNAMTFTGVFNACGVIEDLEQGREIHALAMASGELKSSN 123

Query: 549 AEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGAC 591
           A     ++++  R G LE+A +    +   P    W +++ AC
Sbjct: 124 AILENALLNMYVRCGSLEEARKVFDTMD-HPDAFSWTSMITAC 165


>gi|359493563|ref|XP_002269754.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g71420-like [Vitis vinifera]
          Length = 741

 Score =  438 bits (1127), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 268/743 (36%), Positives = 401/743 (53%), Gaps = 41/743 (5%)

Query: 74  LFNVIIRGFSNNEMPKSS-----------ICFYTHLRKNTAL-----TPDNFTYSFVLSA 117
           +F+   RGFS   +  +S           +C   HL++   L      P    +S    A
Sbjct: 8   VFSGFFRGFSTTGVSLNSEAINLLHHIRLLCSRGHLQEALKLFYSITPPPPLVHSHHTYA 67

Query: 118 A--SACCDRSI---GVLLHGHAIVSGYGSD--LFVGAALVDLYFKFSWVKSARKVFDKMP 170
           A   AC  RS    G  LH H  +    SD  LF+   +V++Y K   +  A ++FD+MP
Sbjct: 68  ALFQACARRSSLPEGQALHRHMFLHNPNSDFNLFLTNHVVNMYAKCGSLDYAHQMFDEMP 127

Query: 171 EKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGM 230
           EK+ V W +++SG  ++    +   VF  M+     W   T  A      A   +   G 
Sbjct: 128 EKNIVSWTALVSGYAQHGRSNECFRVFRGML----IWHQPTEFAFASVISACGGDDNCGR 183

Query: 231 EIQCLGLKLGFHDHVYVLTGLVSFYSK-CGEVERAELLFRDIVRPDLISCNAMISGYTCN 289
           ++  L LK  F   VYV   L+  Y K CG  + A  ++  +   +L+S N+MI+G+   
Sbjct: 184 QVHALALKTSFDSCVYVGNALIMMYCKSCGGADEAWNVYEAMGFRNLVSWNSMIAGFQVC 243

Query: 290 GKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCL--KSGIVSNSS 347
           G    +L LF Q+     R + +T+V +       G   L  C    CL  K+G +    
Sbjct: 244 GCGNRALELFSQMHVGGIRFDRATLVSIFSCLCGMGD-GLECCFQLQCLTIKTGFILKIE 302

Query: 348 VLTALSTVYSRLN-EMEAARKLFDE-SSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQA 405
           V TAL   YS L  E+    ++F E    + + SW  +IA + +    ++A+ +F++   
Sbjct: 303 VATALVKAYSSLGGEVSDCYRIFLELDGRQDVVSWTGIIAAFAERD-PKKALVIFRQFLR 361

Query: 406 SKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVE 465
             +AP+    S +L ACA L        V   V    FE +I ++ ALI   A+CG++  
Sbjct: 362 ECLAPDRHMFSIVLKACAGLATERHALTVQSHVLKVGFEDDIVLANALIHACARCGSVAL 421

Query: 466 ARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSH 525
           ++++FD M  +  V+WN+M+  Y +HG G EAL LFS+M     +P G TF+++L ACSH
Sbjct: 422 SKQVFDKMGSRDTVSWNSMLKAYAMHGQGKEALLLFSQM---DAQPDGATFVALLSACSH 478

Query: 526 AGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWG 585
           AG+  EG +IF++M ++HG  P  +HYACMVDILGRAGQ+ +A E I  + +EP   VW 
Sbjct: 479 AGMAEEGAKIFETMSNNHGIVPQLDHYACMVDILGRAGQISEAKELIDKMPMEPDSVVWS 538

Query: 586 ALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRK 645
           ALLG+C  H +T LA++A+ KL ELDP N   +VL+SNI+  +  + +A  +R+ ++ + 
Sbjct: 539 ALLGSCRKHGETKLAKLAAVKLKELDPNNSLGYVLMSNIFCTDGRFNEARLIRREMEGKI 598

Query: 646 LAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVE 705
           + K PG + IEVG   H F SG Q HP+  AI A LE+L  ++++ G+  +   ALHD+E
Sbjct: 599 VRKEPGLSWIEVGNQVHEFASGGQQHPEKEAICARLEELVRRLKDLGYVPQISLALHDIE 658

Query: 706 EEEKELMMKVHSEKLAIAFGLIATE----PGTEIRIIKNLRVCLDCHTATKFISKVTGRV 761
           +E KE  +  HSEKLA+AF L+        G  I+I+KN+R+C+DCH   K  S++    
Sbjct: 659 DEHKEEQLYYHSEKLALAFALMNVGSICCSGNTIKIMKNIRICVDCHNFMKLASELVDME 718

Query: 762 IVVRDANRFHHFKGGVCSCGDYW 784
           IVVRD+NRFHHFK  VCSC DYW
Sbjct: 719 IVVRDSNRFHHFKAKVCSCNDYW 741



 Score = 49.7 bits (117), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 40/189 (21%), Positives = 86/189 (45%), Gaps = 17/189 (8%)

Query: 8   SRNLFLSLLK---GAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALF 64
            R++F  +LK   G  T+       + ++  GF++D+     L H  +   +   ++ +F
Sbjct: 367 DRHMFSIVLKACAGLATERHALTVQSHVLKVGFEDDIVLANALIHACARCGSVALSKQVF 426

Query: 65  FSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDR 124
             +   D   +N +++ ++ +   K ++  ++ +       PD  T+  +LSA S     
Sbjct: 427 DKMGSRDTVSWNSMLKAYAMHGQGKEALLLFSQMDAQ----PDGATFVALLSACSHAGMA 482

Query: 125 SIG-----VLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMP-EKDTVLWN 178
             G      + + H IV      L   A +VD+  +   +  A+++ DKMP E D+V+W+
Sbjct: 483 EEGAKIFETMSNNHGIV----PQLDHYACMVDILGRAGQISEAKELIDKMPMEPDSVVWS 538

Query: 179 SMISGLMKN 187
           +++    K+
Sbjct: 539 ALLGSCRKH 547


>gi|357140731|ref|XP_003571917.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Brachypodium distachyon]
          Length = 695

 Score =  438 bits (1127), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 244/682 (35%), Positives = 388/682 (56%), Gaps = 12/682 (1%)

Query: 112 SFVLSAASACCDRS----IGVLLHGHAIVSGYGS-DLFVGAALVDLYFKFSWVKSARKVF 166
           S  L+A    C R+    +G  LH   ++SG  +   F+   L+ +Y   + V SA ++F
Sbjct: 17  SLRLAAPLQSCGRAGDLRLGRCLHARLVLSGAAAASTFLANHLITMYSHCADVPSAVRLF 76

Query: 167 DKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQEL 226
           D MP  + V W +++SGL +N   +D++  F  M R  G      ++++   A A +   
Sbjct: 77  DAMPRPNLVSWTTLVSGLTQNSMHRDALAAFSSMCR-AGLVPTQFALSSAARAAAALAAR 135

Query: 227 RLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGY 286
             G ++ C+G++LGF   ++V + L   YSK G +  A  +F  + + D ++  AMI GY
Sbjct: 136 HAGAQLHCVGVRLGFDAELFVASNLADMYSKSGLLVEACRVFDQMPQKDAVAWTAMIDGY 195

Query: 287 TCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLH---LTNCIHSFCLKSGIV 343
             NG  E+++  FR +    E +  +    L  V    G L    L   IHS  +KSG  
Sbjct: 196 AKNGNLEAAVIAFRDM--RREGLVGADQHVLCSVLSASGGLKDGWLARAIHSCVMKSGFE 253

Query: 344 SNSSVLTALSTVYSRLNEME-AARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQE 402
              +V  AL+ +Y++  +M+ AAR +  +    ++ S  ++I GY +    E+A+ +F E
Sbjct: 254 QEVAVRNALTDMYAKAADMDNAARVVKIDQGSLNVVSATSLIDGYIETDCIEKALLMFIE 313

Query: 403 MQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGN 462
           ++   V PN  T SS++  CA    +  G  +H  V   +  S+ +VS+ L+DMY KCG 
Sbjct: 314 LRRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAEVIKTSLISDSFVSSTLLDMYGKCGL 373

Query: 463 IVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYA 522
           I  + +LF  + + +++ WN  I+    HGHG EA++ F  M  SGIRP+ +TF+S+L A
Sbjct: 374 ISLSIQLFKEIEYHTDIAWNAAINVLAQHGHGREAIRAFDRMTSSGIRPNHITFVSLLTA 433

Query: 523 CSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPA 582
           CSHAGLV EG + F SM   HG +P  EHY+C++D+ GRAG+L++A +FI  + V+P   
Sbjct: 434 CSHAGLVDEGLKYFYSMKDHHGIEPKGEHYSCIIDMYGRAGRLDEAEKFIGEMPVKPNAY 493

Query: 583 VWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVK 642
            W +LLGAC +  +  L  +A++ + +L+P+N G HV LS IY++   +     VR++++
Sbjct: 494 GWCSLLGACRMRGNKELGEIAADNMMKLEPDNTGVHVSLSGIYASLGQWEDVKAVRKLMR 553

Query: 643 KRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALH 702
             ++ K PG + ++     HVF S D  HPQ   IY  LE+L  +++E G+  +T     
Sbjct: 554 DNRIKKLPGFSWVDSNKKTHVFGSEDWSHPQQEKIYEKLEELYERIKEEGYVPDTRFLPC 613

Query: 703 DVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVI 762
           ++E+  K+ +++ HSE++A+AF LI+      I + KNLR+C DCH+A KFISKV  R I
Sbjct: 614 NLEDTAKQRILRYHSERIAVAFALISMPATKPIIVKKNLRICADCHSALKFISKVENRDI 673

Query: 763 VVRDANRFHHFKGGVCSCGDYW 784
           +VRD +RFHHF  G CSCGDYW
Sbjct: 674 IVRDNSRFHHFVKGGCSCGDYW 695



 Score =  170 bits (430), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 128/472 (27%), Positives = 222/472 (47%), Gaps = 11/472 (2%)

Query: 29  HAQIIIHGFQNDLSTVTKLAHRLSDFKATCY----ARALFFSIPKPDLFLFNVIIRGFSN 84
           HA++++ G     +  T LA+ L    + C     A  LF ++P+P+L  +  ++ G + 
Sbjct: 40  HARLVLSGAA---AASTFLANHLITMYSHCADVPSAVRLFDAMPRPNLVSWTTLVSGLTQ 96

Query: 85  NEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLF 144
           N M + ++  ++ + +   L P  F  S    AA+A   R  G  LH   +  G+ ++LF
Sbjct: 97  NSMHRDALAAFSSMCR-AGLVPTQFALSSAARAAAALAARHAGAQLHCVGVRLGFDAELF 155

Query: 145 VGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNG 204
           V + L D+Y K   +  A +VFD+MP+KD V W +MI G  KN   + ++  F DM R G
Sbjct: 156 VASNLADMYSKSGLLVEACRVFDQMPQKDAVAWTAMIDGYAKNGNLEAAVIAFRDMRREG 215

Query: 205 GTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERA 264
               D   + +VL A   +++  L   I    +K GF   V V   L   Y+K  +++ A
Sbjct: 216 LVGADQHVLCSVLSASGGLKDGWLARAIHSCVMKSGFEQEVAVRNALTDMYAKAADMDNA 275

Query: 265 ELLFR-DIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYP 323
             + + D    +++S  ++I GY      E +L +F +L       N  T   +I     
Sbjct: 276 ARVVKIDQGSLNVVSATSLIDGYIETDCIEKALLMFIELRRQGVEPNEFTFSSMIKGCAM 335

Query: 324 FGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAM 383
              L     +H+  +K+ ++S+S V + L  +Y +   +  + +LF E    +  +WNA 
Sbjct: 336 QALLEQGAQLHAEVIKTSLISDSFVSSTLLDMYGKCGLISLSIQLFKEIEYHTDIAWNAA 395

Query: 384 IAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLG-KWVHELVKSRN 442
           I    Q+G   EAI  F  M +S + PN +T  S+L+AC+  G +  G K+ + +     
Sbjct: 396 INVLAQHGHGREAIRAFDRMTSSGIRPNHITFVSLLTACSHAGLVDEGLKYFYSMKDHHG 455

Query: 443 FESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEV-TWNTMISGYGLHGH 493
            E      + +IDMY + G + EA +    M  K     W +++    + G+
Sbjct: 456 IEPKGEHYSCIIDMYGRAGRLDEAEKFIGEMPVKPNAYGWCSLLGACRMRGN 507



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 102/449 (22%), Positives = 186/449 (41%), Gaps = 38/449 (8%)

Query: 27  QTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNE 86
           Q H   +  GF  +L   + LA   S       A  +F  +P+ D   +  +I G++ N 
Sbjct: 140 QLHCVGVRLGFDAELFVASNLADMYSKSGLLVEACRVFDQMPQKDAVAWTAMIDGYAKNG 199

Query: 87  MPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVG 146
             ++++  +  +R+   +  D      VLSA+    D  +   +H   + SG+  ++ V 
Sbjct: 200 NLEAAVIAFRDMRREGLVGADQHVLCSVLSASGGLKDGWLARAIHSCVMKSGFEQEVAVR 259

Query: 147 AALVDLYFKFSWVKSARKVFD-KMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGG 205
            AL D+Y K + + +A +V        + V   S+I G ++  C + ++ +F ++ R  G
Sbjct: 260 NALTDMYAKAADMDNAARVVKIDQGSLNVVSATSLIDGYIETDCIEKALLMFIEL-RRQG 318

Query: 206 TWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAE 265
              +  + ++++   A    L  G ++    +K       +V + L+  Y KCG +  + 
Sbjct: 319 VEPNEFTFSSMIKGCAMQALLEQGAQLHAEVIKTSLISDSFVSSTLLDMYGKCGLISLSI 378

Query: 266 LLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFG 325
            LF++I     I+ NA I+    +G    ++R F ++ +S  R N  T V L        
Sbjct: 379 QLFKEIEYHTDIAWNAAINVLAQHGHGREAIRAFDRMTSSGIRPNHITFVSL-------- 430

Query: 326 HLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIA 385
              LT C H+  +  G          L   YS  +             E     ++ +I 
Sbjct: 431 ---LTACSHAGLVDEG----------LKYFYSMKDH---------HGIEPKGEHYSCIID 468

Query: 386 GYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHE-LVKSRNFE 444
            Y + G  +EA     EM    V PN     S+L AC   G   LG+   + ++K     
Sbjct: 469 MYGRAGRLDEAEKFIGEM---PVKPNAYGWCSLLGACRMRGNKELGEIAADNMMKLEPDN 525

Query: 445 SNIYVSTALIDMYAKCGNIVEARELFDLM 473
           + ++VS  L  +YA  G   + + +  LM
Sbjct: 526 TGVHVS--LSGIYASLGQWEDVKAVRKLM 552


>gi|222624541|gb|EEE58673.1| hypothetical protein OsJ_10095 [Oryza sativa Japonica Group]
          Length = 669

 Score =  438 bits (1127), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 224/555 (40%), Positives = 326/555 (58%), Gaps = 34/555 (6%)

Query: 221 AEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCN 280
           A    L LG +I     +LG   +V+V    +S Y++CG  + A  +F ++   D++S N
Sbjct: 23  AATDGLVLGRQIHSSTARLGLDGNVFVAHSAISMYARCGRPDDAYQMFEEMQYRDVVSWN 82

Query: 281 AMISGYTCNGKTESSLRLFRQLLA-SAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLK 339
           AMISG+   G    ++ +FR+L+A    + ++ T+  ++P                    
Sbjct: 83  AMISGFAHAGLFGRAMDVFRELVALQCPKPDAGTMASILP-------------------- 122

Query: 340 SGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISL 399
                        S   +R+ ++   + +FDE   K L SWNAM+A YT N +  EA+ L
Sbjct: 123 -------------SMGKARVEDIALLKGVFDEMRFKGLISWNAMLAVYTNNEMHVEAVEL 169

Query: 400 FQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAK 459
           F  MQ   + P+ VT++++L +C ++ A+SLGK +HE++K R   S++ +  AL+DMYA 
Sbjct: 170 FMRMQKDGIEPDAVTLATVLPSCGEVSALSLGKRIHEVIKRRRMCSSMLLENALMDMYAN 229

Query: 460 CGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSV 519
           CG + EAR++FD M  +  V+W ++IS YG HGHG EA+ LF +M   G+ P  + F+++
Sbjct: 230 CGCLKEARDVFDSMGTRDVVSWTSIISAYGRHGHGREAIDLFEKMCGQGLEPDSIAFVAI 289

Query: 520 LYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEP 579
           L ACSHAGL+  G   F SM  +    P  EHYACMVD+LGRAG + +A +FI  + ++P
Sbjct: 290 LAACSHAGLLDMGKHYFYSMTSEFHIAPKLEHYACMVDLLGRAGCIREAYDFIMVMPIKP 349

Query: 580 GPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQ 639
              VWGALLGAC IH + ++  +A++ L  L P+  GY+VLLSNIY+    +   + VR 
Sbjct: 350 NERVWGALLGACRIHSNMDIGLLAADSLLRLAPKQTGYYVLLSNIYARAGRWADVSMVRS 409

Query: 640 VVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVT 699
           V++ + + K PG +  E+G   H F  GD  HPQS  IY  L +L  ++RE G+  E   
Sbjct: 410 VMESKGIKKLPGVSNAELGDRVHTFHIGDTSHPQSKMIYKKLSELLRRIREMGYNPEVEA 469

Query: 700 ALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTG 759
            LHDVEEE+KE  + VHSEKLAIAF LI T PGT IRI  NLR C DCH A K IS + G
Sbjct: 470 TLHDVEEEDKEGHLSVHSEKLAIAFLLINTNPGTPIRITMNLRTCSDCHHAAKLISTIAG 529

Query: 760 RVIVVRDANRFHHFK 774
           R I+++D NR H+ K
Sbjct: 530 REIILKDVNRIHYMK 544



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 91/400 (22%), Positives = 180/400 (45%), Gaps = 36/400 (9%)

Query: 126 IGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLM 185
           +G  +H      G   ++FV  + + +Y +      A ++F++M  +D V WN+MISG  
Sbjct: 30  LGRQIHSSTARLGLDGNVFVAHSAISMYARCGRPDDAYQMFEEMQYRDVVSWNAMISGFA 89

Query: 186 KNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHV 245
               F  ++ VF ++V       D+ ++A++LP++ + +       ++ + L  G  D  
Sbjct: 90  HAGLFGRAMDVFRELVALQCPKPDAGTMASILPSMGKAR-------VEDIALLKGVFD-- 140

Query: 246 YVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLAS 305
                              E+ F+      LIS NAM++ YT N     ++ LF ++   
Sbjct: 141 -------------------EMRFK-----GLISWNAMLAVYTNNEMHVEAVELFMRMQKD 176

Query: 306 AERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAA 365
               ++ T+  ++P       L L   IH    +  + S+  +  AL  +Y+    ++ A
Sbjct: 177 GIEPDAVTLATVLPSCGEVSALSLGKRIHEVIKRRRMCSSMLLENALMDMYANCGCLKEA 236

Query: 366 RKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQL 425
           R +FD    + + SW ++I+ Y ++G   EAI LF++M    + P+ +   +IL+AC+  
Sbjct: 237 RDVFDSMGTRDVVSWTSIISAYGRHGHGREAIDLFEKMCGQGLEPDSIAFVAILAACSHA 296

Query: 426 GAISLGK-WVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHK-SEVTWNT 483
           G + +GK + + +    +    +     ++D+  + G I EA +   +M  K +E  W  
Sbjct: 297 GLLDMGKHYFYSMTSEFHIAPKLEHYACMVDLLGRAGCIREAYDFIMVMPIKPNERVWGA 356

Query: 484 MISGYGLHGHGLEALQLFSEMLHSGIRPSG-VTFLSVLYA 522
           ++    +H +    L     +L    + +G    LS +YA
Sbjct: 357 LLGACRIHSNMDIGLLAADSLLRLAPKQTGYYVLLSNIYA 396



 Score = 69.3 bits (168), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 52/219 (23%), Positives = 94/219 (42%), Gaps = 15/219 (6%)

Query: 404 QASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNI 463
           Q   + P P+ +     +CA    + LG+ +H        + N++V+ + I MYA+CG  
Sbjct: 4   QGPGLLPGPLHLPVGFKSCAATDGLVLGRQIHSSTARLGLDGNVFVAHSAISMYARCGRP 63

Query: 464 VEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLH-SGIRPSGVTFLSVLYA 522
            +A ++F+ M ++  V+WN MISG+   G    A+ +F E++     +P   T  S+L +
Sbjct: 64  DDAYQMFEEMQYRDVVSWNAMISGFAHAGLFGRAMDVFRELVALQCPKPDAGTMASILPS 123

Query: 523 CSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIK--GLAVEPG 580
              A +  E   + + +  +  FK L    A +         +E    F++     +EP 
Sbjct: 124 MGKARV--EDIALLKGVFDEMRFKGLISWNAMLAVYTNNEMHVEAVELFMRMQKDGIEPD 181

Query: 581 PAVWGALLGAC----------MIHKDTNLARVASEKLFE 609
                 +L +C           IH+     R+ S  L E
Sbjct: 182 AVTLATVLPSCGEVSALSLGKRIHEVIKRRRMCSSMLLE 220


>gi|449446125|ref|XP_004140822.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 809

 Score =  438 bits (1126), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 252/736 (34%), Positives = 380/736 (51%), Gaps = 72/736 (9%)

Query: 59  YARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAA 118
           Y R +F  I   + F++N++IR +     P  +   Y  +  N  L  DN+TY  ++ A 
Sbjct: 30  YTRRIFNFIENTNCFMWNMMIRAYIQTNSPHFAFTLYKSMLSNY-LGADNYTYPLLIQAC 88

Query: 119 SACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWN 178
           S          +H H +  G+ SD++V   L++ +   S +  A +VF++    D+V WN
Sbjct: 89  SIRRSEWEAKQVHNHVLKLGFDSDVYVRNTLINCFSVCSNMTDACRVFNESSVLDSVSWN 148

Query: 179 SMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLK 238
           S+++G ++    +++  ++  M                                      
Sbjct: 149 SILAGYIEIGNVEEAKHIYHQMPERS---------------------------------- 174

Query: 239 LGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRL 298
                 +     ++  +   G V  A  LF +++  D+++ +A+I+ +  N   E ++R 
Sbjct: 175 ------IIASNSMIVLFGMRGLVVEACKLFDEMLEKDMVTWSALIACFQQNEMYEEAIRT 228

Query: 299 FRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSR 358
           F  +      V+    V  +        +++   IHS  LK G  S  ++  AL  +YS+
Sbjct: 229 FVGMHKIGVMVDEVVAVSALSACANLLVVNMGKLIHSLSLKIGTESYINLQNALIYMYSK 288

Query: 359 LNEMEAARKLFDES-------------------------------SEKSLASWNAMIAGY 387
             ++  ARKLFDE+                                EK + SW++MI+GY
Sbjct: 289 CGDIMVARKLFDEAYLLDLISWNSMISGYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGY 348

Query: 388 TQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNI 447
            QN L +E ++LFQEMQ S   P+  T+ S++SACA+L A+  GKWVH  +K      N+
Sbjct: 349 AQNDLFDETLALFQEMQMSGFKPDETTLVSVISACARLAALEQGKWVHAYIKRNGLTINV 408

Query: 448 YVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHS 507
            + T LIDMY KCG +  A E+F  M  K   TWN +I G  ++G    +L +FS M   
Sbjct: 409 ILGTTLIDMYMKCGCVETALEVFYGMIEKGISTWNALILGLAMNGLVESSLDMFSNMKKC 468

Query: 508 GIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEK 567
            + P+ +TF+ VL AC H GLV EG   F SMIHDH  +P  +HY CMVD+LGRAG+L++
Sbjct: 469 HVTPNEITFMGVLGACRHMGLVDEGQHHFYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQE 528

Query: 568 ALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSA 627
           A E +  + + P  A WGALLGAC  H D+ + R    KL EL P++ G+HVLLSNIY++
Sbjct: 529 AEELLNRMPMTPDVATWGALLGACKKHGDSEMGRRVGRKLIELQPDHDGFHVLLSNIYAS 588

Query: 628 ERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGK 687
           +  +     +R ++ K ++ K PGC++IE  G  H F +GD+ HP   AI  ML ++  K
Sbjct: 589 KGKWDDVLEIRGMMTKHRVLKIPGCSMIEANGVIHEFLAGDKTHPDMDAIEDMLVEMAMK 648

Query: 688 MREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDC 747
           ++  G+  +    L DV+EEEKE  +  HSEKLAIAFGLI   P T IRI+KNLR+C DC
Sbjct: 649 LKLEGYTPDINEVLLDVDEEEKESTLFRHSEKLAIAFGLINISPPTPIRIMKNLRICNDC 708

Query: 748 HTATKFISKVTGRVIV 763
           HTA K ISK   R IV
Sbjct: 709 HTAAKLISKAFCRKIV 724



 Score =  162 bits (410), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 131/489 (26%), Positives = 219/489 (44%), Gaps = 79/489 (16%)

Query: 135 IVSGYGSDLFVGAALVDL--YFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQD 192
           +++G+  + +  + L+    +F F  +   R++F+ +   +  +WN MI   ++      
Sbjct: 2   LLTGFIRETYAASRLIKFSTHFPFIHIDYTRRIFNFIENTNCFMWNMMIRAYIQTNSPHF 61

Query: 193 SIWVFGDMVRN--GGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTG 250
           +  ++  M+ N  G    D+ +   ++ A +  +      ++    LKLGF   VYV   
Sbjct: 62  AFTLYKSMLSNYLGA---DNYTYPLLIQACSIRRSEWEAKQVHNHVLKLGFDSDVYVRNT 118

Query: 251 LVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVN 310
           L++ +S C  +  A  +F +    D +S N++++GY   G  E +  ++ Q+    ER  
Sbjct: 119 LINCFSVCSNMTDACRVFNESSVLDSVSWNSILAGYIEIGNVEEAKHIYHQM---PER-- 173

Query: 311 SSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFD 370
                                        S I SNS ++     ++     +  A KLFD
Sbjct: 174 -----------------------------SIIASNSMIV-----LFGMRGLVVEACKLFD 199

Query: 371 ESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISL 430
           E  EK + +W+A+IA + QN + EEAI  F  M    V  + V   S LSACA L  +++
Sbjct: 200 EMLEKDMVTWSALIACFQQNEMYEEAIRTFVGMHKIGVMVDEVVAVSALSACANLLVVNM 259

Query: 431 GKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEAREL--------------------- 469
           GK +H L      ES I +  ALI MY+KCG+I+ AR+L                     
Sbjct: 260 GKLIHSLSLKIGTESYINLQNALIYMYSKCGDIMVARKLFDEAYLLDLISWNSMISGYLK 319

Query: 470 ----------FDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSV 519
                     FD M  K  V+W++MISGY  +    E L LF EM  SG +P   T +SV
Sbjct: 320 CNLVDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDETLALFQEMQMSGFKPDETTLVSV 379

Query: 520 LYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEP 579
           + AC+    + +G  +  + I  +G          ++D+  + G +E ALE   G+ +E 
Sbjct: 380 ISACARLAALEQGKWV-HAYIKRNGLTINVILGTTLIDMYMKCGCVETALEVFYGM-IEK 437

Query: 580 GPAVWGALL 588
           G + W AL+
Sbjct: 438 GISTWNALI 446


>gi|224065723|ref|XP_002301939.1| predicted protein [Populus trichocarpa]
 gi|222843665|gb|EEE81212.1| predicted protein [Populus trichocarpa]
          Length = 613

 Score =  438 bits (1126), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 226/573 (39%), Positives = 336/573 (58%), Gaps = 1/573 (0%)

Query: 213 VAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIV 272
           V+A++ A++    +     + C  +K   ++H ++   LVS Y + G  + A  LF ++ 
Sbjct: 41  VSALITAISTCSSISYCRALHCRVIKSVNYNHGFIGDQLVSSYVELGCTKDALELFDELP 100

Query: 273 RPDLISCNAMISGYTCNGKTESSLRL-FRQLLASAERVNSSTIVGLIPVFYPFGHLHLTN 331
             DL+S N++ISG++        L L FR       + N  T++ ++      G L +  
Sbjct: 101 DKDLVSWNSLISGFSRRADLGICLGLLFRMRFEMGLKPNEVTVIPVVSACAGVGELDVGK 160

Query: 332 CIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNG 391
           CIH   +KSG++    V+ +L  +Y +   +EAA  LF+  S +SL SWN+M+A +   G
Sbjct: 161 CIHGIAVKSGMLLEVKVVNSLINLYGKCGCLEAACCLFEGMSVQSLVSWNSMVAVHVHMG 220

Query: 392 LTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVST 451
           L E+ I  F  M+ + +  +  TV S+L AC  LG   L + VH  + +   + N+ ++T
Sbjct: 221 LAEKGIGYFIMMRRAGINSDQATVVSLLLACENLGVRKLAEAVHGYILNGGLDGNLAIAT 280

Query: 452 ALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRP 511
           AL+D+YAK G + ++ ++F  M +   V W  M+S Y +HG G EA++ F  M+  G+ P
Sbjct: 281 ALLDLYAKLGTLSDSCKVFGGMINPDAVAWTAMLSSYAMHGRGREAIEHFELMVREGVVP 340

Query: 512 SGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEF 571
             VTF  +L ACSH+GLV EG   F+ M   +G +   EHY+CMVD+LGR+G L  A + 
Sbjct: 341 DHVTFTHLLSACSHSGLVEEGKNYFKIMYEFYGVELRVEHYSCMVDLLGRSGHLNDAYKL 400

Query: 572 IKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDY 631
           IK + +EP   VWGAL+GAC +  +  L +  +E+LF LDP +   ++ LSN+YSA   +
Sbjct: 401 IKSMPMEPNSGVWGALIGACRVRGNIELGKEVAERLFSLDPSDSRNYITLSNMYSAAGQW 460

Query: 632 LQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREA 691
             A+ VR ++K+R L + PGC+ IE G   H F  GDQ HP +  IY  LE+L  K RE 
Sbjct: 461 RDASKVRALMKERVLIRNPGCSYIEHGNKIHCFVMGDQSHPDTEQIYNKLEELVRKNREV 520

Query: 692 GFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTAT 751
           GF ++T   LHDV+EE KE ++  HSEKLAIAFGL+ T  G  + I KN+R+C DCH   
Sbjct: 521 GFASKTEYVLHDVDEEVKEDLINKHSEKLAIAFGLLVTNAGMPLIITKNIRICGDCHGFA 580

Query: 752 KFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           K IS +  R I++RD  RFHHF  G+CSCGDYW
Sbjct: 581 KLISLIEKRTIIIRDTKRFHHFTNGLCSCGDYW 613



 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 113/426 (26%), Positives = 200/426 (46%), Gaps = 3/426 (0%)

Query: 112 SFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPE 171
           S +++A S C   S    LH   I S   +  F+G  LV  Y +    K A ++FD++P+
Sbjct: 42  SALITAISTCSSISYCRALHCRVIKSVNYNHGFIGDQLVSSYVELGCTKDALELFDELPD 101

Query: 172 KDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGME 231
           KD V WNS+ISG  +       + +   M    G   +  +V  V+ A A V EL +G  
Sbjct: 102 KDLVSWNSLISGFSRRADLGICLGLLFRMRFEMGLKPNEVTVIPVVSACAGVGELDVGKC 161

Query: 232 IQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGK 291
           I  + +K G    V V+  L++ Y KCG +E A  LF  +    L+S N+M++ +   G 
Sbjct: 162 IHGIAVKSGMLLEVKVVNSLINLYGKCGCLEAACCLFEGMSVQSLVSWNSMVAVHVHMGL 221

Query: 292 TESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTA 351
            E  +  F  +  +    + +T+V L+      G   L   +H + L  G+  N ++ TA
Sbjct: 222 AEKGIGYFIMMRRAGINSDQATVVSLLLACENLGVRKLAEAVHGYILNGGLDGNLAIATA 281

Query: 352 LSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPN 411
           L  +Y++L  +  + K+F         +W AM++ Y  +G   EAI  F+ M    V P+
Sbjct: 282 LLDLYAKLGTLSDSCKVFGGMINPDAVAWTAMLSSYAMHGRGREAIEHFELMVREGVVPD 341

Query: 412 PVTVSSILSACAQLGAISLGK-WVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELF 470
            VT + +LSAC+  G +  GK +   + +    E  +   + ++D+  + G++ +A +L 
Sbjct: 342 HVTFTHLLSACSHSGLVEEGKNYFKIMYEFYGVELRVEHYSCMVDLLGRSGHLNDAYKLI 401

Query: 471 DLMSHK-SEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLV 529
             M  + +   W  +I    + G+ +E  +  +E L S        ++++    S AG  
Sbjct: 402 KSMPMEPNSGVWGALIGACRVRGN-IELGKEVAERLFSLDPSDSRNYITLSNMYSAAGQW 460

Query: 530 REGDEI 535
           R+  ++
Sbjct: 461 RDASKV 466



 Score =  112 bits (280), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 78/284 (27%), Positives = 136/284 (47%), Gaps = 3/284 (1%)

Query: 312 STIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDE 371
           S +  LI        +     +H   +KS   ++  +   L + Y  L   + A +LFDE
Sbjct: 39  SLVSALITAISTCSSISYCRALHCRVIKSVNYNHGFIGDQLVSSYVELGCTKDALELFDE 98

Query: 372 SSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQ-ASKVAPNPVTVSSILSACAQLGAISL 430
             +K L SWN++I+G+++       + L   M+    + PN VTV  ++SACA +G + +
Sbjct: 99  LPDKDLVSWNSLISGFSRRADLGICLGLLFRMRFEMGLKPNEVTVIPVVSACAGVGELDV 158

Query: 431 GKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGL 490
           GK +H +         + V  +LI++Y KCG +  A  LF+ MS +S V+WN+M++ +  
Sbjct: 159 GKCIHGIAVKSGMLLEVKVVNSLINLYGKCGCLEAACCLFEGMSVQSLVSWNSMVAVHVH 218

Query: 491 HGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAE 550
            G   + +  F  M  +GI     T +S+L AC + G VR+  E     I + G      
Sbjct: 219 MGLAEKGIGYFIMMRRAGINSDQATVVSLLLACENLG-VRKLAEAVHGYILNGGLDGNLA 277

Query: 551 HYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIH 594
               ++D+  + G L  + +   G+ + P    W A+L +  +H
Sbjct: 278 IATALLDLYAKLGTLSDSCKVFGGM-INPDAVAWTAMLSSYAMH 320



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 107/443 (24%), Positives = 192/443 (43%), Gaps = 42/443 (9%)

Query: 35  HGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICF 94
           HGF  D     +L     +   T  A  LF  +P  DL  +N +I GFS        +  
Sbjct: 72  HGFIGD-----QLVSSYVELGCTKDALELFDELPDKDLVSWNSLISGFSRRADLGICLGL 126

Query: 95  YTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYF 154
              +R    L P+  T   V+SA +   +  +G  +HG A+ SG   ++ V  +L++LY 
Sbjct: 127 LFRMRFEMGLKPNEVTVIPVVSACAGVGELDVGKCIHGIAVKSGMLLEVKVVNSLINLYG 186

Query: 155 KFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVA 214
           K   +++A  +F+ M  +  V WNSM++  +     +  I  F  M+R  G   D  +V 
Sbjct: 187 KCGCLEAACCLFEGMSVQSLVSWNSMVAVHVHMGLAEKGIGYF-IMMRRAGINSDQATVV 245

Query: 215 AVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRP 274
           ++L A   +   +L   +    L  G   ++ + T L+  Y+K G +  +  +F  ++ P
Sbjct: 246 SLLLACENLGVRKLAEAVHGYILNGGLDGNLAIATALLDLYAKLGTLSDSCKVFGGMINP 305

Query: 275 DLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIH 334
           D ++  AM+S Y  +G+   ++  F  ++            G++P    F HL L+ C H
Sbjct: 306 DAVAWTAMLSSYAMHGRGREAIEHFELMVRE----------GVVPDHVTFTHL-LSACSH 354

Query: 335 SFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTE 394
           S  ++ G              +  + E            E  +  ++ M+    ++G   
Sbjct: 355 SGLVEEG-----------KNYFKIMYEFYGV--------ELRVEHYSCMVDLLGRSGHLN 395

Query: 395 EAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRN-FESNIYVSTAL 453
           +A  L + M    + PN     +++ AC   G I LGK V E + S +  +S  Y++  L
Sbjct: 396 DAYKLIKSM---PMEPNSGVWGALIGACRVRGNIELGKEVAERLFSLDPSDSRNYIT--L 450

Query: 454 IDMYAKCGNIVEARELFDLMSHK 476
            +MY+  G   +A ++  LM  +
Sbjct: 451 SNMYSAAGQWRDASKVRALMKER 473



 Score = 49.7 bits (117), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 43/177 (24%), Positives = 77/177 (43%), Gaps = 7/177 (3%)

Query: 34  IHGF--QNDLSTVTKLAHRLSDFKATC----YARALFFSIPKPDLFLFNVIIRGFSNNEM 87
           IHG   ++ +    K+ + L +    C     A  LF  +    L  +N ++    +  +
Sbjct: 162 IHGIAVKSGMLLEVKVVNSLINLYGKCGCLEAACCLFEGMSVQSLVSWNSMVAVHVHMGL 221

Query: 88  PKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGA 147
            +  I ++  +R+   +  D  T   +L A      R +   +HG+ +  G   +L +  
Sbjct: 222 AEKGIGYFIMMRR-AGINSDQATVVSLLLACENLGVRKLAEAVHGYILNGGLDGNLAIAT 280

Query: 148 ALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNG 204
           AL+DLY K   +  + KVF  M   D V W +M+S    +   +++I  F  MVR G
Sbjct: 281 ALLDLYAKLGTLSDSCKVFGGMINPDAVAWTAMLSSYAMHGRGREAIEHFELMVREG 337


>gi|224124674|ref|XP_002330082.1| predicted protein [Populus trichocarpa]
 gi|222871507|gb|EEF08638.1| predicted protein [Populus trichocarpa]
          Length = 665

 Score =  438 bits (1126), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 250/664 (37%), Positives = 367/664 (55%), Gaps = 56/664 (8%)

Query: 130 LHGHAIVSGYGSDLFVGAALVDLYFK--FSWVKSARKVFDKMPEKDTVLWNSMISGLMKN 187
           +H  A+ +G+  D +V   LV  Y    FS +  A KVF+ +P  +  ++N +I G ++N
Sbjct: 49  VHAVALRTGHFQDHYVSGTLVKCYANPHFSNLNFALKVFEYVPNPNVFVFNIIIKGCLQN 108

Query: 188 -------CCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLG 240
                  CC+      +  M+ +     +  +   +  A    +    G+++    +K G
Sbjct: 109 NEPCKAICCY------YKMMIAHARP--NKFTYPTLFKACTAAEAAEEGVQVHAHVIKQG 160

Query: 241 FHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFR 300
               V++ +  +  Y   GEVE A  +  +    D+I  NAMI GY   G+ E++    +
Sbjct: 161 LSGDVHIRSAGIQMYGSFGEVEGARRMLGEDGNSDVICFNAMIDGYLKCGEVEAA----K 216

Query: 301 QLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLN 360
           +L  S E  N  +                 N + S   K G++                 
Sbjct: 217 ELFWSMEDKNVGS----------------WNVMVSGMAKCGMI----------------- 243

Query: 361 EMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILS 420
             E AR+LF+E  EK+  SW+AMI GY + G  +EA+ +F  MQ  ++ P    +SS+L+
Sbjct: 244 --EEARELFNEMKEKNEISWSAMIDGYIKGGYYKEALEVFNVMQREEIRPRKFVLSSVLA 301

Query: 421 ACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVT 480
           ACA LGA+  G+W+H  V + +   +  + TAL+DMYAKCG +  A ++F+ M  K   T
Sbjct: 302 ACANLGALDQGRWIHAYVNNNSNSFDAVLGTALVDMYAKCGRLDMAWDVFEKMEKKEVFT 361

Query: 481 WNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMI 540
           WN MI G G+HG   +A++LF +M     RP+G+T L VL AC+H+G+V EG  IF SM 
Sbjct: 362 WNAMICGLGMHGRAEDAIELFFKMQKQKFRPNGITLLGVLSACAHSGMVDEGLRIFNSME 421

Query: 541 HDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLA 600
             +G +P  EHY C+VD+LGRAG L +A E +  + +EP  AVWGALLGAC  H D  L 
Sbjct: 422 EVYGIEPGMEHYGCVVDLLGRAGLLGEAEEVMYSMPMEPSAAVWGALLGACRKHGDVELG 481

Query: 601 RVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGT 660
               + L EL+P+N G + LLSNIY+    +   A VR+++K+R +  + G ++I+  G 
Sbjct: 482 ERVGKILLELEPQNSGRYALLSNIYARAGRWDDVANVRKLMKERGVKTSTGISMIDFDGV 541

Query: 661 PHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKL 720
            H F  GD  HPQ   IY ML+ +  +++  GF   T   L D+EEEEKE  ++ HSEKL
Sbjct: 542 VHEFKMGDGSHPQMKNIYLMLKNMIKRLKMEGFSPNTSQVLFDIEEEEKEAELQYHSEKL 601

Query: 721 AIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSC 780
           AIAFGLI T+PGT I ++KNLR+C DCH+A K IS+V  R I+VRD  R+HHFK G CSC
Sbjct: 602 AIAFGLINTKPGTTIHVVKNLRMCEDCHSAFKLISQVYDREIIVRDRARYHHFKTGTCSC 661

Query: 781 GDYW 784
            D+W
Sbjct: 662 KDFW 665



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 66/270 (24%), Positives = 114/270 (42%), Gaps = 14/270 (5%)

Query: 327 LHLTNCIHSFCLKSGIVSNSSVLTALSTVYSR--LNEMEAARKLFDESSEKSLASWNAMI 384
           LH    +H+  L++G   +  V   L   Y+    + +  A K+F+     ++  +N +I
Sbjct: 43  LHHLKQVHAVALRTGHFQDHYVSGTLVKCYANPHFSNLNFALKVFEYVPNPNVFVFNIII 102

Query: 385 AGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFE 444
            G  QN    +AI  + +M  +   PN  T  ++  AC    A   G  VH  V  +   
Sbjct: 103 KGCLQNNEPCKAICCYYKMMIAHARPNKFTYPTLFKACTAAEAAEEGVQVHAHVIKQGLS 162

Query: 445 SNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEM 504
            ++++ +A I MY   G +  AR +     +   + +N MI GY   G    A +LF  M
Sbjct: 163 GDVHIRSAGIQMYGSFGEVEGARRMLGEDGNSDVICFNAMIDGYLKCGEVEAAKELFWSM 222

Query: 505 LHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQ 564
               +    V  +S +  C   G++ E  E+F  M   +        ++ M+D   + G 
Sbjct: 223 EDKNVGSWNV-MVSGMAKC---GMIEEARELFNEMKEKNEIS-----WSAMIDGYIKGGY 273

Query: 565 LEKALEFIKGLAVE---PGPAVWGALLGAC 591
            ++ALE    +  E   P   V  ++L AC
Sbjct: 274 YKEALEVFNVMQREEIRPRKFVLSSVLAAC 303


>gi|218188961|gb|EEC71388.1| hypothetical protein OsI_03510 [Oryza sativa Indica Group]
          Length = 706

 Score =  438 bits (1126), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 212/436 (48%), Positives = 281/436 (64%)

Query: 349 LTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKV 408
           +TA+    +   E +AAR+LFD   ++   +WNAMIAGY   G + EA+ LF EM+ +  
Sbjct: 271 VTAMVGALATGGEADAARELFDGMPQRDHVAWNAMIAGYVHTGRSREALRLFDEMRHAGA 330

Query: 409 APNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARE 468
           A   VT+ S L+ACAQLGA+  GKWVH    SR    ++ + TALIDMY+KCG +  A E
Sbjct: 331 AVGEVTLVSALTACAQLGALERGKWVHSCAHSRGMRLSVTLGTALIDMYSKCGAVAAAME 390

Query: 469 LFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGL 528
           +FD M  ++  TW + +SG  ++G G + L LF  M  +G+ P+GVTF+ VL  CS AGL
Sbjct: 391 VFDSMGERNVYTWTSAVSGLAMNGMGRDCLALFKRMESTGVEPNGVTFVVVLRGCSMAGL 450

Query: 529 VREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALL 588
           V EG   F SM  +HG  P  EHY CMVD+ GRAG+L+ A+ FI G+ +EP   VWGALL
Sbjct: 451 VDEGRACFDSMKSNHGIDPWLEHYGCMVDLYGRAGRLDDAVNFINGMPLEPHEGVWGALL 510

Query: 589 GACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAK 648
            A  IHK+  L + A +KL  ++ +N   HVLLSNIY+  +++   + VR ++K + + K
Sbjct: 511 NASRIHKNVELGKYAMDKLMAIESKNDAAHVLLSNIYADSQNWKGVSNVRNMMKAKGVKK 570

Query: 649 APGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEE 708
            PGC+ IEVGG  H F  G + HP+   I  ML ++N ++R  G+   T   L D+EEE+
Sbjct: 571 VPGCSAIEVGGKVHEFFVGGKTHPRHKEIEMMLAEMNQRLRLQGYIANTKEVLFDIEEED 630

Query: 709 KELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDAN 768
           KE  + +HSEKLAIAFGL+A     EIRI+KNLRVC DCH  TK ISKV  R IV+RD N
Sbjct: 631 KEDAISLHSEKLAIAFGLVALPEDMEIRIVKNLRVCEDCHDYTKMISKVFNREIVMRDRN 690

Query: 769 RFHHFKGGVCSCGDYW 784
           RFHHFK G CSC DYW
Sbjct: 691 RFHHFKDGACSCKDYW 706



 Score =  113 bits (282), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 64/249 (25%), Positives = 126/249 (50%), Gaps = 2/249 (0%)

Query: 245 VYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLA 304
           V  +T +V   +  GE + A  LF  + + D ++ NAMI+GY   G++  +LRLF ++  
Sbjct: 268 VVCVTAMVGALATGGEADAARELFDGMPQRDHVAWNAMIAGYVHTGRSREALRLFDEMRH 327

Query: 305 SAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEA 364
           +   V   T+V  +      G L     +HS     G+  + ++ TAL  +YS+   + A
Sbjct: 328 AGAAVGEVTLVSALTACAQLGALERGKWVHSCAHSRGMRLSVTLGTALIDMYSKCGAVAA 387

Query: 365 ARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQ 424
           A ++FD   E+++ +W + ++G   NG+  + ++LF+ M+++ V PN VT   +L  C+ 
Sbjct: 388 AMEVFDSMGERNVYTWTSAVSGLAMNGMGRDCLALFKRMESTGVEPNGVTFVVVLRGCSM 447

Query: 425 LGAISLGKWVHELVKSRN-FESNIYVSTALIDMYAKCGNIVEARELFDLMS-HKSEVTWN 482
            G +  G+   + +KS +  +  +     ++D+Y + G + +A    + M     E  W 
Sbjct: 448 AGLVDEGRACFDSMKSNHGIDPWLEHYGCMVDLYGRAGRLDDAVNFINGMPLEPHEGVWG 507

Query: 483 TMISGYGLH 491
            +++   +H
Sbjct: 508 ALLNASRIH 516



 Score = 83.2 bits (204), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 108/516 (20%), Positives = 202/516 (39%), Gaps = 102/516 (19%)

Query: 15  LLKGAKTQSQLTQTHAQIIIHGFQNDLS-------TVTKLAHRLSDFKATCYARALFFSI 67
           L   A +Q  L + HA +++ G     S       ++   +    D     YAR L    
Sbjct: 99  LAAAASSQRHLREIHAHLLVSGRIASPSHLAAFLASLASSSSDDDDDGDLSYARLLLPRR 158

Query: 68  PKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSI- 126
           P   L   N ++R  +    P  +   +    ++  L PDN++++F++ AA+A    +  
Sbjct: 159 PA-TLLAHNSLLRALARGRRPHLAFGAF----RDLPLVPDNYSFTFLVRAATALAAAAAS 213

Query: 127 -------------GVLLHGHA--------IVSGYGS-----------------DLFVGAA 148
                          L HGHA         VS Y +                 D+    A
Sbjct: 214 ALDAALIAGSVHASALRHGHAGDPHVQSGAVSMYAAAGDVGAARAAFAEIASPDVVCVTA 273

Query: 149 LVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWL 208
           +V          +AR++FD MP++D V WN+MI+G +     ++++ +F +M R+ G  +
Sbjct: 274 MVGALATGGEADAARELFDGMPQRDHVAWNAMIAGYVHTGRSREALRLFDEM-RHAGAAV 332

Query: 209 DSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLF 268
              ++ + L A A++  L  G  +       G    V + T L+  YSKCG V  A  +F
Sbjct: 333 GEVTLVSALTACAQLGALERGKWVHSCAHSRGMRLSVTLGTALIDMYSKCGAVAAAMEVF 392

Query: 269 RDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLH 328
             +   ++ +  + +SG   NG     L LF+++ ++    N  T V ++          
Sbjct: 393 DSMGERNVYTWTSAVSGLAMNGMGRDCLALFKRMESTGVEPNGVTFVVVL---------- 442

Query: 329 LTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDE-SSEKSLASW----NAM 383
                   C  +G+V                   +  R  FD   S   +  W      M
Sbjct: 443 ------RGCSMAGLV-------------------DEGRACFDSMKSNHGIDPWLEHYGCM 477

Query: 384 IAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHE---LVKS 440
           +  Y + G  ++A++    M    + P+     ++L+A      + LGK+  +    ++S
Sbjct: 478 VDLYGRAGRLDDAVNFINGM---PLEPHEGVWGALLNASRIHKNVELGKYAMDKLMAIES 534

Query: 441 RNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHK 476
           +N  +++ +S    ++YA   N      + ++M  K
Sbjct: 535 KNDAAHVLLS----NIYADSQNWKGVSNVRNMMKAK 566



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 46/174 (26%), Positives = 68/174 (39%), Gaps = 32/174 (18%)

Query: 434 VHELVKSRNFESNIYVSTALIDMYAKCGNI------------------------------ 463
           VH          + +V +  + MYA  G++                              
Sbjct: 224 VHASALRHGHAGDPHVQSGAVSMYAAAGDVGAARAAFAEIASPDVVCVTAMVGALATGGE 283

Query: 464 -VEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYA 522
              ARELFD M  +  V WN MI+GY   G   EAL+LF EM H+G     VT +S L A
Sbjct: 284 ADAARELFDGMPQRDHVAWNAMIAGYVHTGRSREALRLFDEMRHAGAAVGEVTLVSALTA 343

Query: 523 CSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLA 576
           C+  G +  G  +  S  H  G +        ++D+  + G +  A+E    + 
Sbjct: 344 CAQLGALERGKWV-HSCAHSRGMRLSVTLGTALIDMYSKCGAVAAAMEVFDSMG 396


>gi|125535994|gb|EAY82482.1| hypothetical protein OsI_37700 [Oryza sativa Indica Group]
          Length = 584

 Score =  438 bits (1126), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 218/454 (48%), Positives = 311/454 (68%), Gaps = 2/454 (0%)

Query: 333 IHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGL 392
           +H+  +  G  S+  V TAL  +YS+  ++  ARKLFD   ++S+ +WNAMI+GY QNGL
Sbjct: 131 VHAHSVLLGFGSDRFVQTALVVLYSKCGQLPVARKLFDAIRDRSVVAWNAMISGYEQNGL 190

Query: 393 TEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTA 452
            E AI +++EMQ ++V P+  T  + LSACAQ GA+ LG+ V   + S   + ++++ +A
Sbjct: 191 AERAIEVYREMQVAQVVPDSATFVTTLSACAQAGALDLGREVERRIVSDQMDVSVFLGSA 250

Query: 453 LIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPS 512
           L++MYA+CG + +AR+ FD +  ++ VTW +MI+GYG+HGHG EA++LF  M   G  P+
Sbjct: 251 LVNMYARCGLVSKARDWFDRLQERNVVTWTSMIAGYGMHGHGCEAIKLFHLMRLEGPTPN 310

Query: 513 GVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFI 572
            VTF++VL AC+HAGLV EG   F SM   +G  P AEHY  MVD+ GRAG L+ A++FI
Sbjct: 311 DVTFVAVLAACAHAGLVNEGRSAFDSMKRVYGLVPRAEHYCSMVDMYGRAGLLDDAMQFI 370

Query: 573 K-GLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDY 631
           +  +  EPGP VW A+LGAC +HK+ NL    +E+L  L+PEN  + VLLSNIY+     
Sbjct: 371 RDSIPGEPGPEVWTAMLGACKMHKNFNLGVEVAERLIALEPENPSHRVLLSNIYALSGKM 430

Query: 632 LQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREA 691
                VR V+ KR+L K  G +LIE+GGT H+F  G++ H Q+  IY  LE+L  ++ +A
Sbjct: 431 NHVEKVRNVMIKRRLKKQIGYSLIELGGTSHLFRMGEKSHQQTREIYQYLEELIHRISDA 490

Query: 692 GFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGL-IATEPGTEIRIIKNLRVCLDCHTA 750
           G+  ET + LH++EEEE+E+ ++ HSEKLA+A+GL +++   T IR+IKNLR+C DCH A
Sbjct: 491 GYVPETDSVLHELEEEEREVALRYHSEKLAVAYGLMMSSGSTTPIRVIKNLRICGDCHLA 550

Query: 751 TKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
            KF+S V  R I+VRD +RFHHFK G CSC +YW
Sbjct: 551 IKFMSSVESREIIVRDKHRFHHFKDGKCSCLEYW 584



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 137/534 (25%), Positives = 228/534 (42%), Gaps = 54/534 (10%)

Query: 12  FLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPD 71
           F SLL        L Q HA++++ G    L  VTKLA       A  YA  L  S P  D
Sbjct: 14  FDSLLVAGPRLGPLKQAHARLVVAGHGGSLPLVTKLATLAVAAGAAPYAHLLAASHPACD 73

Query: 72  LFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLH 131
            FL + + R  ++  +P  +I FY  L    AL   +F ++    A +       G+ +H
Sbjct: 74  SFLLSSLARAAAHRGLPGEAIAFYGRLLA-AALPFSSFAFTAAAKACADLSALRTGMAVH 132

Query: 132 GHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQ 191
            H+++ G+GSD FV  ALV LY K   +  ARK+FD + ++  V WN+MISG  +N   +
Sbjct: 133 AHSVLLGFGSDRFVQTALVVLYSKCGQLPVARKLFDAIRDRSVVAWNAMISGYEQNGLAE 192

Query: 192 DSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGL 251
            +I V+ +M +      DS +    L A A+   L LG E++   +       V++ + L
Sbjct: 193 RAIEVYREM-QVAQVVPDSATFVTTLSACAQAGALDLGREVERRIVSDQMDVSVFLGSAL 251

Query: 252 VSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNS 311
           V+ Y++CG V +A   F  +   ++++  +MI+GY  +G    +++LF  +       N 
Sbjct: 252 VNMYARCGLVSKARDWFDRLQERNVVTWTSMIAGYGMHGHGCEAIKLFHLMRLEGPTPND 311

Query: 312 STIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDE 371
            T V +           L  C H+  +  G     S   ++  VY  +   E        
Sbjct: 312 VTFVAV-----------LAACAHAGLVNEG----RSAFDSMKRVYGLVPRAE-------- 348

Query: 372 SSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLG 431
                   + +M+  Y + GL ++A+   ++    +  P P   +++L AC      +LG
Sbjct: 349 -------HYCSMVDMYGRAGLLDDAMQFIRDSIPGE--PGPEVWTAMLGACKMHKNFNLG 399

Query: 432 KWVHELV--------KSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNT 483
             V E +          R   SNIY  +  ++   K  N++  R L      K ++ ++ 
Sbjct: 400 VEVAERLIALEPENPSHRVLLSNIYALSGKMNHVEKVRNVMIKRRL------KKQIGYSL 453

Query: 484 MISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQ 537
           +  G      G   L    E  H   R        +++  S AG V E D +  
Sbjct: 454 IELG------GTSHLFRMGEKSHQQTREIYQYLEELIHRISDAGYVPETDSVLH 501


>gi|302786698|ref|XP_002975120.1| hypothetical protein SELMODRAFT_102603 [Selaginella moellendorffii]
 gi|300157279|gb|EFJ23905.1| hypothetical protein SELMODRAFT_102603 [Selaginella moellendorffii]
          Length = 485

 Score =  438 bits (1126), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 208/477 (43%), Positives = 312/477 (65%), Gaps = 2/477 (0%)

Query: 310 NSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLF 369
           N  T V ++  F   G L     +HS    +G+  +  V TAL  +Y +   +E AR  F
Sbjct: 9   NKVTYVTVLSGFTTPGSLEEGRRVHSRVAGAGLEVDVIVGTALVNMYGKCQSVEEARAAF 68

Query: 370 DESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASK--VAPNPVTVSSILSACAQLGA 427
           ++ S  ++ SW+AM+A Y QNG    A+ L++EM +++  +APN VT  ++L AC+ LGA
Sbjct: 69  EKISRPNVVSWSAMLAAYAQNGHARMALELYREMGSARKGMAPNRVTFITLLDACSFLGA 128

Query: 428 ISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISG 487
           ++ G+ +H  V  R F++++ V  AL++ Y +CG++ +A+ +FD M  +  ++W++MIS 
Sbjct: 129 LAEGRKIHAAVAERGFDTDLVVCNALVNFYGRCGSLGDAKIVFDGMRRRDVISWSSMISA 188

Query: 488 YGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKP 547
           +   G   EA++L+  ML  G  P  + F+SVL+ACS++G+V    + F+S++ D   +P
Sbjct: 189 FAQRGRVDEAMELYHRMLSEGTLPDDIIFISVLFACSNSGVVEASGDFFRSIVGDTQVEP 248

Query: 548 LAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKL 607
             EHYACMVD+LGRAG+L  A + ++ +   PGP ++  +L AC ++ D      A+E +
Sbjct: 249 TLEHYACMVDVLGRAGKLRDAEDLLRLMPFHPGPLLYMTMLSACKLYTDVERGEAAAEVV 308

Query: 608 FELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSG 667
           FELDPEN   ++ L+NIYSA +    AA +R+++++R + K PGC+ IEV    H F +G
Sbjct: 309 FELDPENSSPYITLANIYSAAKRPKDAARIRKLMEERGIKKKPGCSWIEVLDRVHEFIAG 368

Query: 668 DQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLI 727
           D++HPQ   IYA +++L  +M+EAG+  +T   L DVEE+EKE ++  HSEKLAIAFGLI
Sbjct: 369 DKMHPQRDEIYAEIQRLGRQMKEAGYFQDTKVVLQDVEEDEKENLLWYHSEKLAIAFGLI 428

Query: 728 ATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           +T PG  +RI+KNLRVC DCH ATK ISKVTGR I+VRD NRFHHF  G+CSC DYW
Sbjct: 429 STPPGAPLRIVKNLRVCSDCHAATKVISKVTGREILVRDTNRFHHFLDGMCSCNDYW 485



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 71/256 (27%), Positives = 124/256 (48%), Gaps = 4/256 (1%)

Query: 240 GFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLF 299
           G    V V T LV+ Y KC  VE A   F  I RP+++S +AM++ Y  NG    +L L+
Sbjct: 40  GLEVDVIVGTALVNMYGKCQSVEEARAAFEKISRPNVVSWSAMLAAYAQNGHARMALELY 99

Query: 300 RQLLASAERV--NSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYS 357
           R++ ++ + +  N  T + L+      G L     IH+   + G  ++  V  AL   Y 
Sbjct: 100 REMGSARKGMAPNRVTFITLLDACSFLGALAEGRKIHAAVAERGFDTDLVVCNALVNFYG 159

Query: 358 RLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSS 417
           R   +  A+ +FD    + + SW++MI+ + Q G  +EA+ L+  M +    P+ +   S
Sbjct: 160 RCGSLGDAKIVFDGMRRRDVISWSSMISAFAQRGRVDEAMELYHRMLSEGTLPDDIIFIS 219

Query: 418 ILSACAQLGAISL-GKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMS-H 475
           +L AC+  G +   G +   +V     E  +     ++D+  + G + +A +L  LM  H
Sbjct: 220 VLFACSNSGVVEASGDFFRSIVGDTQVEPTLEHYACMVDVLGRAGKLRDAEDLLRLMPFH 279

Query: 476 KSEVTWNTMISGYGLH 491
              + + TM+S   L+
Sbjct: 280 PGPLLYMTMLSACKLY 295



 Score =  102 bits (253), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 59/175 (33%), Positives = 94/175 (53%), Gaps = 3/175 (1%)

Query: 403 MQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGN 462
           M+   V  N VT  ++LS     G++  G+ VH  V     E ++ V TAL++MY KC +
Sbjct: 1   MEIRGVERNKVTYVTVLSGFTTPGSLEEGRRVHSRVAGAGLEVDVIVGTALVNMYGKCQS 60

Query: 463 IVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEM--LHSGIRPSGVTFLSVL 520
           + EAR  F+ +S  + V+W+ M++ Y  +GH   AL+L+ EM     G+ P+ VTF+++L
Sbjct: 61  VEEARAAFEKISRPNVVSWSAMLAAYAQNGHARMALELYREMGSARKGMAPNRVTFITLL 120

Query: 521 YACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGL 575
            ACS  G + EG +I  + + + GF         +V+  GR G L  A     G+
Sbjct: 121 DACSFLGALAEGRKI-HAAVAERGFDTDLVVCNALVNFYGRCGSLGDAKIVFDGM 174



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 88/372 (23%), Positives = 165/372 (44%), Gaps = 37/372 (9%)

Query: 107 DNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVF 166
           +  TY  VLS  +       G  +H     +G   D+ VG ALV++Y K   V+ AR  F
Sbjct: 9   NKVTYVTVLSGFTTPGSLEEGRRVHSRVAGAGLEVDVIVGTALVNMYGKCQSVEEARAAF 68

Query: 167 DKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDM-VRNGGTWLDSTSVAAVLPAVAEVQE 225
           +K+   + V W++M++   +N   + ++ ++ +M     G   +  +   +L A + +  
Sbjct: 69  EKISRPNVVSWSAMLAAYAQNGHARMALELYREMGSARKGMAPNRVTFITLLDACSFLGA 128

Query: 226 LRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISG 285
           L  G +I     + GF   + V   LV+FY +CG +  A+++F  + R D+IS ++MIS 
Sbjct: 129 LAEGRKIHAAVAERGFDTDLVVCNALVNFYGRCGSLGDAKIVFDGMRRRDVISWSSMISA 188

Query: 286 YTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSN 345
           +   G+ + ++ L+ ++L+           G +P    F  + L  C           SN
Sbjct: 189 FAQRGRVDEAMELYHRMLSE----------GTLPDDIIFISV-LFAC-----------SN 226

Query: 346 SSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQA 405
           S V+ A    +  +        + D   E +L  +  M+    + G   +A  L + M  
Sbjct: 227 SGVVEASGDFFRSI--------VGDTQVEPTLEHYACMVDVLGRAGKLRDAEDLLRLM-- 276

Query: 406 SKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFE-SNIYVSTALIDMYAKCGNIV 464
               P P+   ++LSAC     +  G+   E+V   + E S+ Y++  L ++Y+      
Sbjct: 277 -PFHPGPLLYMTMLSACKLYTDVERGEAAAEVVFELDPENSSPYIT--LANIYSAAKRPK 333

Query: 465 EARELFDLMSHK 476
           +A  +  LM  +
Sbjct: 334 DAARIRKLMEER 345



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 45/197 (22%), Positives = 93/197 (47%), Gaps = 4/197 (2%)

Query: 12  FLSLLKGAKTQSQLTQ---THAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIP 68
           ++++L G  T   L +    H+++   G + D+   T L +     ++   ARA F  I 
Sbjct: 13  YVTVLSGFTTPGSLEEGRRVHSRVAGAGLEVDVIVGTALVNMYGKCQSVEEARAAFEKIS 72

Query: 69  KPDLFLFNVIIRGFSNNEMPKSSICFYTHL-RKNTALTPDNFTYSFVLSAASACCDRSIG 127
           +P++  ++ ++  ++ N   + ++  Y  +      + P+  T+  +L A S     + G
Sbjct: 73  RPNVVSWSAMLAAYAQNGHARMALELYREMGSARKGMAPNRVTFITLLDACSFLGALAEG 132

Query: 128 VLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKN 187
             +H      G+ +DL V  ALV+ Y +   +  A+ VFD M  +D + W+SMIS   + 
Sbjct: 133 RKIHAAVAERGFDTDLVVCNALVNFYGRCGSLGDAKIVFDGMRRRDVISWSSMISAFAQR 192

Query: 188 CCFQDSIWVFGDMVRNG 204
               +++ ++  M+  G
Sbjct: 193 GRVDEAMELYHRMLSEG 209


>gi|357468777|ref|XP_003604673.1| hypothetical protein MTR_4g015760 [Medicago truncatula]
 gi|355505728|gb|AES86870.1| hypothetical protein MTR_4g015760 [Medicago truncatula]
          Length = 838

 Score =  438 bits (1126), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 229/696 (32%), Positives = 395/696 (56%), Gaps = 5/696 (0%)

Query: 7   QSRNLFLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFS 66
           + RNL + LL+   ++  ++Q H+Q +  G  +D   VTKL    + + +  +A  LF  
Sbjct: 137 ERRNLLVKLLETCCSKLSISQLHSQCLKAGLVHDSFIVTKLNVLYARYASIHHAHKLFQE 196

Query: 67  IPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALT----PDNFTYSFVLSAASACC 122
            P   ++L+N ++R +        ++  +  +   ++++    PDN++ S  L + +   
Sbjct: 197 TPHRTVYLWNALLRSYCFEGEWVETLSLFRQMNNVSSVSIEERPDNYSVSIALKSCAGLR 256

Query: 123 DRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMIS 182
              +G ++HG         D+FVG+AL+DLY K   +  A KVF + P+ D VLW S+IS
Sbjct: 257 KLLLGKVIHGFLKKVRIDGDMFVGSALIDLYTKCGQMNDAVKVFMEYPKPDVVLWTSIIS 316

Query: 183 GLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFH 242
           G  ++   + ++  F  MV +     D  ++ +V  A A++   +LG  +     + G  
Sbjct: 317 GYEQSGSPELALAFFSRMVVSEKVSPDPVTLVSVASACAQLSNFKLGRSVHGFVKRKGLD 376

Query: 243 DHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQL 302
           + + +   L+  Y K G ++ A  LFR++   D+IS + M++ Y  NG     L LF ++
Sbjct: 377 NKLCLANSLLHLYGKTGSIKNASNLFREMSDKDIISWSTMVACYADNGAETDVLDLFNEM 436

Query: 303 LASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEM 362
           L    + N  T+V ++       +L     IH   +  G    ++V TAL  +Y +    
Sbjct: 437 LDKRIKPNWVTVVSVLRACACISNLEEGMKIHELAVNYGFEMETTVSTALMDMYMKCFSP 496

Query: 363 EAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSAC 422
           E A  LF+   +K + +W  + +GY  NG+  E++ +F+ M +S   P+ + +  IL+  
Sbjct: 497 EKAVDLFNRMPKKDVIAWAVLFSGYADNGMVHESMWVFRNMLSSGTRPDAIALVKILTTI 556

Query: 423 AQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWN 482
           ++LG +     +H  V    FE+N ++  +LI++YAKC +I +A ++F  M++K  VTW+
Sbjct: 557 SELGILQQAVCLHAFVIKNGFENNQFIGASLIEVYAKCSSIEDANKVFKGMTYKDVVTWS 616

Query: 483 TMISGYGLHGHGLEALQLFSEML-HSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIH 541
           ++I+ YG HG G EAL+LF +M  HS  +P+ VTF+S+L ACSH+GL++EG  +F  M++
Sbjct: 617 SIIAAYGFHGQGEEALKLFYQMANHSDTKPNNVTFISILSACSHSGLIKEGINMFDIMVN 676

Query: 542 DHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLAR 601
            +  KP +EHYA MVD+LGR G+L+ AL+ I  + ++ GP +WGALLGAC IH++  +  
Sbjct: 677 KYKLKPNSEHYAIMVDLLGRMGELDMALDVINNMPMQAGPDIWGALLGACRIHQNIKMGE 736

Query: 602 VASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTP 661
           VA++ LF LDP + GY++LLSNIYS + ++  A  +R++VK+++L K  G +++E+    
Sbjct: 737 VAAKNLFSLDPNHAGYYILLSNIYSVDENWHSATKLRRLVKEKRLNKIVGQSVVELKNEV 796

Query: 662 HVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTET 697
             F +GD++H +S  IY +L KL+ KMRE  F  + 
Sbjct: 797 RSFIAGDRIHDESDHIYEILTKLHAKMREVAFDPQV 832


>gi|115487662|ref|NP_001066318.1| Os12g0181900 [Oryza sativa Japonica Group]
 gi|77553160|gb|ABA95956.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|113648825|dbj|BAF29337.1| Os12g0181900 [Oryza sativa Japonica Group]
 gi|125578708|gb|EAZ19854.1| hypothetical protein OsJ_35439 [Oryza sativa Japonica Group]
          Length = 584

 Score =  437 bits (1125), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 218/454 (48%), Positives = 309/454 (68%), Gaps = 2/454 (0%)

Query: 333 IHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGL 392
           +H+  +  G  S+  V TAL  +YS+  ++  ARKLFD   ++S+ +WNAMI+GY QNGL
Sbjct: 131 VHAHSVLLGFGSDRFVQTALVVLYSKCGQLPVARKLFDAIRDRSVVAWNAMISGYEQNGL 190

Query: 393 TEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTA 452
            E AI +++EMQ ++V P+  T  + LSACAQ GA+ LG+ V   + S   + ++++ +A
Sbjct: 191 AERAIEVYREMQVAQVVPDSATFVATLSACAQAGALDLGREVERRIVSDQMDVSVFLGSA 250

Query: 453 LIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPS 512
           L++MYA+CG + +AR+ FD +  ++ VTW +MI+GYG+HGHG EA++LF  M   G  P+
Sbjct: 251 LVNMYARCGLVSKARDWFDRLQERNVVTWTSMIAGYGMHGHGREAIKLFHLMRREGPTPN 310

Query: 513 GVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFI 572
            VTF++VL AC+HAGLV EG   F SM   +G  P AEHY  MVD+ GRAG L+ A++FI
Sbjct: 311 DVTFVAVLAACAHAGLVNEGRNAFDSMKRVYGLVPRAEHYCSMVDMYGRAGLLDDAMQFI 370

Query: 573 -KGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDY 631
              +  EPGP VW A+LGAC +HK+ NL    +E+L  L+PEN  + VLLSNIY+     
Sbjct: 371 CDSIPEEPGPEVWTAMLGACKMHKNFNLGVEVAERLIALEPENPSHRVLLSNIYALSGKM 430

Query: 632 LQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREA 691
                VR V+ KR+L K  G +LIE+GGT H+F  G++ H Q+  IY  LE+L  ++ +A
Sbjct: 431 NHVEKVRNVMIKRRLKKQIGYSLIELGGTSHLFRMGEKSHQQTREIYRYLEELIHRISDA 490

Query: 692 GFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGT-EIRIIKNLRVCLDCHTA 750
           G+  ET + LH++EEEE+E+ ++ HSEKLA+A+GL+ +   T  IR+IKNLR+C DCH A
Sbjct: 491 GYVPETDSVLHELEEEEREVALRYHSEKLAVAYGLMMSSGSTAPIRVIKNLRICGDCHLA 550

Query: 751 TKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
            KF+S V  R I+VRD +RFHHFK G CSC +YW
Sbjct: 551 IKFMSSVESREIIVRDKHRFHHFKDGKCSCLEYW 584



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 137/534 (25%), Positives = 228/534 (42%), Gaps = 54/534 (10%)

Query: 12  FLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPD 71
           F SLL        L Q HA++++ G    L  VTKLA       A  YA  L  S P  D
Sbjct: 14  FDSLLVAGPRLGPLKQAHARLVVAGHGGSLPLVTKLATLAVAAGAAPYAHLLAASHPACD 73

Query: 72  LFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLH 131
            FL + + R  ++  +P  +I FY  L    AL   +F ++    A +       G+ +H
Sbjct: 74  SFLLSSLARAAAHRGLPGEAIAFYGRLLA-AALPFSSFAFTAAAKACADLSALRTGMAVH 132

Query: 132 GHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQ 191
            H+++ G+GSD FV  ALV LY K   +  ARK+FD + ++  V WN+MISG  +N   +
Sbjct: 133 AHSVLLGFGSDRFVQTALVVLYSKCGQLPVARKLFDAIRDRSVVAWNAMISGYEQNGLAE 192

Query: 192 DSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGL 251
            +I V+ +M +      DS +  A L A A+   L LG E++   +       V++ + L
Sbjct: 193 RAIEVYREM-QVAQVVPDSATFVATLSACAQAGALDLGREVERRIVSDQMDVSVFLGSAL 251

Query: 252 VSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNS 311
           V+ Y++CG V +A   F  +   ++++  +MI+GY  +G    +++LF  +       N 
Sbjct: 252 VNMYARCGLVSKARDWFDRLQERNVVTWTSMIAGYGMHGHGREAIKLFHLMRREGPTPND 311

Query: 312 STIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDE 371
            T V +           L  C H+  +  G     +   ++  VY  +   E        
Sbjct: 312 VTFVAV-----------LAACAHAGLVNEG----RNAFDSMKRVYGLVPRAE-------- 348

Query: 372 SSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLG 431
                   + +M+  Y + GL ++A+    +    +  P P   +++L AC      +LG
Sbjct: 349 -------HYCSMVDMYGRAGLLDDAMQFICDSIPEE--PGPEVWTAMLGACKMHKNFNLG 399

Query: 432 KWVHELV--------KSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNT 483
             V E +          R   SNIY  +  ++   K  N++  R L      K ++ ++ 
Sbjct: 400 VEVAERLIALEPENPSHRVLLSNIYALSGKMNHVEKVRNVMIKRRL------KKQIGYSL 453

Query: 484 MISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQ 537
           +  G      G   L    E  H   R        +++  S AG V E D +  
Sbjct: 454 IELG------GTSHLFRMGEKSHQQTREIYRYLEELIHRISDAGYVPETDSVLH 501


>gi|222619165|gb|EEE55297.1| hypothetical protein OsJ_03249 [Oryza sativa Japonica Group]
          Length = 706

 Score =  437 bits (1125), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 212/436 (48%), Positives = 281/436 (64%)

Query: 349 LTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKV 408
           +TA+    +   E +AAR+LFD   ++   +WNAMIAGY   G + EA+ LF EM+ +  
Sbjct: 271 VTAMVGALATGGEADAARELFDGMPQRDHVAWNAMIAGYVHTGRSREALRLFDEMRHAGA 330

Query: 409 APNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARE 468
           A   VT+ S L+ACAQLGA+  GKWVH    SR    ++ + TALIDMY+KCG +  A E
Sbjct: 331 AVGEVTLVSALTACAQLGALERGKWVHSCAHSRGMRLSVTLGTALIDMYSKCGAVAAAME 390

Query: 469 LFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGL 528
           +FD M  ++  TW + +SG  ++G G + L LF  M  +G+ P+GVTF+ VL  CS AGL
Sbjct: 391 VFDSMGERNVYTWTSAVSGLAMNGMGRDCLALFKRMESTGVEPNGVTFVVVLRGCSMAGL 450

Query: 529 VREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALL 588
           V EG   F SM  +HG  P  EHY CMVD+ GRAG+L+ A+ FI G+ +EP   VWGALL
Sbjct: 451 VDEGRACFDSMKSNHGIDPWLEHYGCMVDLYGRAGRLDDAVNFINGMPLEPHEGVWGALL 510

Query: 589 GACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAK 648
            A  IHK+  L + A +KL  ++ +N   HVLLSNIY+  +++   + VR ++K + + K
Sbjct: 511 NASRIHKNVELGKYAMDKLMAIESKNDAAHVLLSNIYADSQNWKGVSNVRNMMKAKGVKK 570

Query: 649 APGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEE 708
            PGC+ IEVGG  H F  G + HP+   I  ML ++N ++R  G+   T   L D+EEE+
Sbjct: 571 VPGCSAIEVGGKVHEFFVGGKTHPRHKEIEMMLAEMNQRLRLQGYIANTKEVLFDIEEED 630

Query: 709 KELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDAN 768
           KE  + +HSEKLAIAFGL+A     EIRI+KNLRVC DCH  TK ISKV  R IV+RD N
Sbjct: 631 KEDAISLHSEKLAIAFGLVALPEDMEIRIVKNLRVCEDCHDYTKMISKVFNREIVMRDRN 690

Query: 769 RFHHFKGGVCSCGDYW 784
           RFHHFK G CSC DYW
Sbjct: 691 RFHHFKDGACSCKDYW 706



 Score =  113 bits (282), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 64/249 (25%), Positives = 126/249 (50%), Gaps = 2/249 (0%)

Query: 245 VYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLA 304
           V  +T +V   +  GE + A  LF  + + D ++ NAMI+GY   G++  +LRLF ++  
Sbjct: 268 VVCVTAMVGALATGGEADAARELFDGMPQRDHVAWNAMIAGYVHTGRSREALRLFDEMRH 327

Query: 305 SAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEA 364
           +   V   T+V  +      G L     +HS     G+  + ++ TAL  +YS+   + A
Sbjct: 328 AGAAVGEVTLVSALTACAQLGALERGKWVHSCAHSRGMRLSVTLGTALIDMYSKCGAVAA 387

Query: 365 ARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQ 424
           A ++FD   E+++ +W + ++G   NG+  + ++LF+ M+++ V PN VT   +L  C+ 
Sbjct: 388 AMEVFDSMGERNVYTWTSAVSGLAMNGMGRDCLALFKRMESTGVEPNGVTFVVVLRGCSM 447

Query: 425 LGAISLGKWVHELVKSRN-FESNIYVSTALIDMYAKCGNIVEARELFDLMS-HKSEVTWN 482
            G +  G+   + +KS +  +  +     ++D+Y + G + +A    + M     E  W 
Sbjct: 448 AGLVDEGRACFDSMKSNHGIDPWLEHYGCMVDLYGRAGRLDDAVNFINGMPLEPHEGVWG 507

Query: 483 TMISGYGLH 491
            +++   +H
Sbjct: 508 ALLNASRIH 516



 Score = 83.2 bits (204), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 108/516 (20%), Positives = 202/516 (39%), Gaps = 102/516 (19%)

Query: 15  LLKGAKTQSQLTQTHAQIIIHGFQNDLS-------TVTKLAHRLSDFKATCYARALFFSI 67
           L   A +Q  L + HA +++ G     S       ++   +    D     YAR L    
Sbjct: 99  LAAAASSQRHLREIHAHLLVSGRIASPSHLAAFLASLASSSSDDDDDGDLSYARLLLPRR 158

Query: 68  PKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSI- 126
           P   L   N ++R  +    P  +   +    ++  L PDN++++F++ AA+A    +  
Sbjct: 159 PA-TLLAHNSLLRALARGRRPHLAFGAF----RDLPLAPDNYSFTFLVRAATALAAAAAS 213

Query: 127 -------------GVLLHGHA--------IVSGYGS-----------------DLFVGAA 148
                          L HGHA         VS Y +                 D+    A
Sbjct: 214 ALDAALIAGSVHASALRHGHAGDPHVQSGAVSMYAAAGDVGAARAAFAEIASPDVVCVTA 273

Query: 149 LVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWL 208
           +V          +AR++FD MP++D V WN+MI+G +     ++++ +F +M R+ G  +
Sbjct: 274 MVGALATGGEADAARELFDGMPQRDHVAWNAMIAGYVHTGRSREALRLFDEM-RHAGAAV 332

Query: 209 DSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLF 268
              ++ + L A A++  L  G  +       G    V + T L+  YSKCG V  A  +F
Sbjct: 333 GEVTLVSALTACAQLGALERGKWVHSCAHSRGMRLSVTLGTALIDMYSKCGAVAAAMEVF 392

Query: 269 RDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLH 328
             +   ++ +  + +SG   NG     L LF+++ ++    N  T V ++          
Sbjct: 393 DSMGERNVYTWTSAVSGLAMNGMGRDCLALFKRMESTGVEPNGVTFVVVL---------- 442

Query: 329 LTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDE-SSEKSLASW----NAM 383
                   C  +G+V                   +  R  FD   S   +  W      M
Sbjct: 443 ------RGCSMAGLV-------------------DEGRACFDSMKSNHGIDPWLEHYGCM 477

Query: 384 IAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHE---LVKS 440
           +  Y + G  ++A++    M    + P+     ++L+A      + LGK+  +    ++S
Sbjct: 478 VDLYGRAGRLDDAVNFINGM---PLEPHEGVWGALLNASRIHKNVELGKYAMDKLMAIES 534

Query: 441 RNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHK 476
           +N  +++ +S    ++YA   N      + ++M  K
Sbjct: 535 KNDAAHVLLS----NIYADSQNWKGVSNVRNMMKAK 566



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 46/174 (26%), Positives = 68/174 (39%), Gaps = 32/174 (18%)

Query: 434 VHELVKSRNFESNIYVSTALIDMYAKCGNI------------------------------ 463
           VH          + +V +  + MYA  G++                              
Sbjct: 224 VHASALRHGHAGDPHVQSGAVSMYAAAGDVGAARAAFAEIASPDVVCVTAMVGALATGGE 283

Query: 464 -VEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYA 522
              ARELFD M  +  V WN MI+GY   G   EAL+LF EM H+G     VT +S L A
Sbjct: 284 ADAARELFDGMPQRDHVAWNAMIAGYVHTGRSREALRLFDEMRHAGAAVGEVTLVSALTA 343

Query: 523 CSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLA 576
           C+  G +  G  +  S  H  G +        ++D+  + G +  A+E    + 
Sbjct: 344 CAQLGALERGKWV-HSCAHSRGMRLSVTLGTALIDMYSKCGAVAAAMEVFDSMG 396


>gi|225433177|ref|XP_002281549.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15130 [Vitis vinifera]
 gi|296083673|emb|CBI23662.3| unnamed protein product [Vitis vinifera]
          Length = 685

 Score =  437 bits (1125), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 242/664 (36%), Positives = 375/664 (56%), Gaps = 7/664 (1%)

Query: 127 GVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMK 186
           G+ +H  A+  G+G DL +   L+D+Y K S V  A  VFD+M E++ V W +++ G ++
Sbjct: 23  GLQVHAAAVNMGFGFDLIMNNDLIDMYGKCSRVDLACSVFDRMLERNVVSWTALMCGYLQ 82

Query: 187 NCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVY 246
               + S+ +  +M  +G    +  + +  L A   +  +  GM+I  + +K GF     
Sbjct: 83  EGNAKGSLALLCEMGYSG-VKPNEFTFSTSLKACGALGVVENGMQIHGMCVKSGFEWVSV 141

Query: 247 VLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASA 306
           V    +  YSKCG +  AE +F  +   +L+S NAMI+G+T  G    SL LF+++    
Sbjct: 142 VGNATIDMYSKCGRIGMAEQVFNKMPFRNLVSWNAMIAGHTHEGNGRKSLVLFQRMQGQG 201

Query: 307 ERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSG--IVSNSSVLTALSTVYSRLNEMEA 364
           E  +  T    +      G +     IH+  +  G  I   + + +A+  +Y++   +  
Sbjct: 202 EVPDEFTFTSTLKACGALGAIRGGTQIHASLITRGFPISIRNIIASAIVDLYAKCGYLFE 261

Query: 365 ARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQ 424
           A+K+FD   +K+L SW+A+I G+ Q G   EA+ LF++++ S    +   +S ++   A 
Sbjct: 262 AQKVFDRIEQKNLISWSALIQGFAQEGNLLEAMDLFRQLRESVSNVDGFVLSIMMGVFAD 321

Query: 425 LGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTM 484
           L  +  GK +H  +       +I V+ ++IDMY KCG   EA  LF  M  ++ V+W  M
Sbjct: 322 LALVEQGKQMHCYILKVPSGLDISVANSIIDMYLKCGLTEEAERLFSEMQVRNVVSWTVM 381

Query: 485 ISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHG 544
           I+GYG HG G +A+ LF+ M   GI    V +L++L ACSH+GL+RE  E F  + ++H 
Sbjct: 382 ITGYGKHGLGEKAIHLFNRMQLDGIELDEVAYLALLSACSHSGLIRESQEYFSRLCNNHQ 441

Query: 545 FKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVAS 604
            KP  EHYACMVDILGRAGQL++A   I+ + ++P   +W  LL AC +H +  + R   
Sbjct: 442 MKPNIEHYACMVDILGRAGQLKEAKNLIENMKLKPNEGIWQTLLSACRVHGNLEIGREVG 501

Query: 605 EKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVF 664
           E LF +D +N   +V++SNIY+    + +   VR++VK + L K  G + +E+    H F
Sbjct: 502 EILFRMDTDNPVNYVMMSNIYAEAGYWKECERVRKLVKAKGLKKEAGQSWVEINKEIHFF 561

Query: 665 TSGDQLHPQSTAIYAMLEKLNGKMR-EAGFQTETVTALHDVEEEEKELMMKVHSEKLAIA 723
             GD  HP +  I+ ML+++  +++ E G+      ALHDVEEE KE  ++VHSEKLAI 
Sbjct: 562 YGGDDTHPLTEKIHEMLKEMERRVKEEVGYAYGLRFALHDVEEESKEENLRVHSEKLAIG 621

Query: 724 FGLIAT---EPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSC 780
             L+     + G  IR+ KNLRVC DCH   K +SK+  +V VVRDANRFH F+ G+CSC
Sbjct: 622 LALVCDGMEKKGGVIRVFKNLRVCGDCHEFIKGLSKILKKVFVVRDANRFHRFEDGLCSC 681

Query: 781 GDYW 784
           GDYW
Sbjct: 682 GDYW 685



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 143/533 (26%), Positives = 248/533 (46%), Gaps = 12/533 (2%)

Query: 23  SQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGF 82
            Q  Q HA  +  GF  DL     L            A ++F  + + ++  +  ++ G+
Sbjct: 21  DQGLQVHAAAVNMGFGFDLIMNNDLIDMYGKCSRVDLACSVFDRMLERNVVSWTALMCGY 80

Query: 83  SNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSD 142
                 K S+     +   + + P+ FT+S  L A  A      G+ +HG  + SG+   
Sbjct: 81  LQEGNAKGSLALLCEM-GYSGVKPNEFTFSTSLKACGALGVVENGMQIHGMCVKSGFEWV 139

Query: 143 LFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVR 202
             VG A +D+Y K   +  A +VF+KMP ++ V WN+MI+G       + S+ +F  M +
Sbjct: 140 SVVGNATIDMYSKCGRIGMAEQVFNKMPFRNLVSWNAMIAGHTHEGNGRKSLVLFQRM-Q 198

Query: 203 NGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHV--YVLTGLVSFYSKCGE 260
             G   D  +  + L A   +  +R G +I    +  GF   +   + + +V  Y+KCG 
Sbjct: 199 GQGEVPDEFTFTSTLKACGALGAIRGGTQIHASLITRGFPISIRNIIASAIVDLYAKCGY 258

Query: 261 VERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPV 320
           +  A+ +F  I + +LIS +A+I G+   G    ++ LFRQL  S   V+   +  ++ V
Sbjct: 259 LFEAQKVFDRIEQKNLISWSALIQGFAQEGNLLEAMDLFRQLRESVSNVDGFVLSIMMGV 318

Query: 321 FYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASW 380
           F     +     +H + LK     + SV  ++  +Y +    E A +LF E   +++ SW
Sbjct: 319 FADLALVEQGKQMHCYILKVPSGLDISVANSIIDMYLKCGLTEEAERLFSEMQVRNVVSW 378

Query: 381 NAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGK-WVHELVK 439
             MI GY ++GL E+AI LF  MQ   +  + V   ++LSAC+  G I   + +   L  
Sbjct: 379 TVMITGYGKHGLGEKAIHLFNRMQLDGIELDEVAYLALLSACSHSGLIRESQEYFSRLCN 438

Query: 440 SRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHK-SEVTWNTMISGYGLHGHGLEAL 498
           +   + NI     ++D+  + G + EA+ L + M  K +E  W T++S   +HG+ LE  
Sbjct: 439 NHQMKPNIEHYACMVDILGRAGQLKEAKNLIENMKLKPNEGIWQTLLSACRVHGN-LEIG 497

Query: 499 QLFSEMLH--SGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLA 549
           +   E+L       P     +S +YA   AG  +E + + + ++   G K  A
Sbjct: 498 REVGEILFRMDTDNPVNYVMMSNIYA--EAGYWKECERV-RKLVKAKGLKKEA 547



 Score = 76.3 bits (186), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 45/154 (29%), Positives = 79/154 (51%), Gaps = 1/154 (0%)

Query: 415 VSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMS 474
           ++ +L  C++ G    G  VH    +  F  ++ ++  LIDMY KC  +  A  +FD M 
Sbjct: 7   LAKLLRNCSKNGLFDQGLQVHAAAVNMGFGFDLIMNNDLIDMYGKCSRVDLACSVFDRML 66

Query: 475 HKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDE 534
            ++ V+W  ++ GY   G+   +L L  EM +SG++P+  TF + L AC   G+V  G +
Sbjct: 67  ERNVVSWTALMCGYLQEGNAKGSLALLCEMGYSGVKPNEFTFSTSLKACGALGVVENGMQ 126

Query: 535 IFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKA 568
           I   M    GF+ ++      +D+  + G++  A
Sbjct: 127 I-HGMCVKSGFEWVSVVGNATIDMYSKCGRIGMA 159


>gi|110739044|dbj|BAF01440.1| hypothetical protein [Arabidopsis thaliana]
          Length = 720

 Score =  437 bits (1125), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 246/715 (34%), Positives = 382/715 (53%), Gaps = 5/715 (0%)

Query: 75  FNVIIRGFSNNEMPKSSICFYTHLRK---NTALTPDNFTYSFVLSAASACCDRSIGVLLH 131
           +N +IR FS+N   + S      + +   + A  PD  T   VL   +   +  +G  +H
Sbjct: 6   WNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVH 65

Query: 132 GHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQ 191
           G A+      +L +  AL+D+Y K   + +A+ +F     K+ V WN+M+ G        
Sbjct: 66  GWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTH 125

Query: 192 DSIWVFGDMVRNG-GTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTG 250
            +  V   M+  G     D  ++   +P       L    E+ C  LK  F  +  V   
Sbjct: 126 GTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANA 185

Query: 251 LVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVN 310
            V+ Y+KCG +  A+ +F  I    + S NA+I G+  +     SL    Q+  S    +
Sbjct: 186 FVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPD 245

Query: 311 SSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFD 370
           S T+  L+        L L   +H F +++ +  +  V  ++ ++Y    E+   + LFD
Sbjct: 246 SFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFD 305

Query: 371 ESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISL 430
              +KSL SWN +I GY QNG  + A+ +F++M    +    +++  +  AC+ L ++ L
Sbjct: 306 AMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRL 365

Query: 431 GKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGL 490
           G+  H        E + +++ +LIDMYAK G+I ++ ++F+ +  KS  +WN MI GYG+
Sbjct: 366 GREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGI 425

Query: 491 HGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAE 550
           HG   EA++LF EM  +G  P  +TFL VL AC+H+GL+ EG      M    G KP  +
Sbjct: 426 HGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLK 485

Query: 551 HYACMVDILGRAGQLEKALEFI-KGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFE 609
           HYAC++D+LGRAGQL+KAL  + + ++ E    +W +LL +C IH++  +    + KLFE
Sbjct: 486 HYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFE 545

Query: 610 LDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQ 669
           L+PE    +VLLSN+Y+    +     VRQ + +  L K  GC+ IE+      F  G++
Sbjct: 546 LEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNRKVFSFVVGER 605

Query: 670 LHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIAT 729
                  I ++   L  K+ + G++ +T++  HD+ EEEK   ++ HSEKLA+ +GLI T
Sbjct: 606 FLDGFEEIKSLWSILEMKISKMGYRPDTMSVQHDLSEEEKIEQLRGHSEKLALTYGLIKT 665

Query: 730 EPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
             GT IR+ KNLR+C+DCH A K ISKV  R IVVRD  RFHHFK GVCSCGDYW
Sbjct: 666 SEGTTIRVYKNLRICVDCHNAAKLISKVMEREIVVRDNKRFHHFKNGVCSCGDYW 720



 Score =  208 bits (530), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 136/447 (30%), Positives = 229/447 (51%), Gaps = 19/447 (4%)

Query: 172 KDTVLWNSMISGLMKNCCFQDSIWVFGDMVR---NGGTWLDSTSVAAVLPAVAEVQELRL 228
           ++ V WNSMI     N   ++S  + G+M+    +G    D  ++  VLP  A  +E+ L
Sbjct: 1   RNFVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGL 60

Query: 229 GMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTC 288
           G  +    +KL     + +   L+  YSKCG +  A+++F+     +++S N M+ G++ 
Sbjct: 61  GKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSA 120

Query: 289 NGKTESSLRLFRQLLASAERVNSS--TIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNS 346
            G T  +  + RQ+LA  E V +   TI+  +PV +    L     +H + LK   V N 
Sbjct: 121 EGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNE 180

Query: 347 SVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQAS 406
            V  A    Y++   +  A+++F     K++ SWNA+I G+ Q+     ++    +M+ S
Sbjct: 181 LVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKIS 240

Query: 407 KVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEA 466
            + P+  TV S+LSAC++L ++ LGK VH  +     E +++V  +++ +Y  CG +   
Sbjct: 241 GLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTV 300

Query: 467 RELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHA 526
           + LFD M  KS V+WNT+I+GY  +G    AL +F +M+  GI+  G++ + V  ACS  
Sbjct: 301 QALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLL 360

Query: 527 GLVREGDEIFQSMIHDHGFKPLAEH---YAC-MVDILGRAGQLEKALEFIKGLAVEPGPA 582
             +R G E      H +  K L E     AC ++D+  + G + ++ +   GL  E   A
Sbjct: 361 PSLRLGRE-----AHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLK-EKSTA 414

Query: 583 VWGALLGACMIHKDTNLARVASEKLFE 609
            W A++    IH    LA+ A  KLFE
Sbjct: 415 SWNAMIMGYGIH---GLAKEAI-KLFE 437


>gi|225458036|ref|XP_002280360.1| PREDICTED: pentatricopeptide repeat-containing protein At1g25360
           [Vitis vinifera]
          Length = 799

 Score =  437 bits (1125), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 266/778 (34%), Positives = 398/778 (51%), Gaps = 115/778 (14%)

Query: 121 CCDR-----SIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPE---- 171
           CC       SI   +H H I SG+    ++   L+D+Y K S + SA  +FD++ +    
Sbjct: 23  CCPHNPMSYSIARTVHAHMIASGFKPRGYILNRLIDVYCKSSDLVSAHHLFDEIRQPDIV 82

Query: 172 -----------------------------KDTVLWNSMISGLMKNCCFQDSIWVFGDMVR 202
                                        +DTV +N+MI+G   N     +I +F D++R
Sbjct: 83  ARTTLIAAHSSAGNSNLAREIFFATPLGIRDTVCYNAMITGYSHNNDGFGAIELFRDLLR 142

Query: 203 NGGTWLDSTSVAAVLPAVAE-VQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKC--- 258
           NG    D+ +  +VL A+A  V++ +   +I C  +K G      VL  L+S + KC   
Sbjct: 143 NGFR-PDNFTFTSVLGALALIVEDEKQCQQIHCAVVKSGSGFVTSVLNALLSVFVKCASS 201

Query: 259 -------------------------------------GEVERAELLFRDIVRPDLISCNA 281
                                                GE++ A      +    +++ NA
Sbjct: 202 PLVSSSSLMAAARKLFDEMTERDELSWTTMIAGYVRNGELDAARQFLDGMTEKLVVAWNA 261

Query: 282 MISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKS- 340
           MISGY  +G    +L +FR++     + +  T   ++      G       +H++ L++ 
Sbjct: 262 MISGYVHHGFFLEALEMFRKMYLLGIQWDEFTYTSVLSACANAGFFLHGKQVHAYILRTE 321

Query: 341 ---GIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYT--------- 388
               +  + SV  AL+T+Y +  +++ AR++F++   K L SWNA+++GY          
Sbjct: 322 PRPSLDFSLSVNNALATLYWKCGKVDEARQVFNQMPVKDLVSWNAILSGYVNAGRIDEAK 381

Query: 389 ----------------------QNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLG 426
                                 QNG  EE++ LF  M++    P     +  + ACA L 
Sbjct: 382 SFFEEMPERNLLTWTVMISGLAQNGFGEESLKLFNRMKSEGFEPCDYAFAGAIIACAWLA 441

Query: 427 AISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMIS 486
           A+  G+ +H  +    F+S++    ALI MYAKCG +  A  LF  M +   V+WN MI+
Sbjct: 442 ALMHGRQLHAQLVRLGFDSSLSAGNALITMYAKCGVVEAAHCLFLTMPYLDSVSWNAMIA 501

Query: 487 GYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFK 546
             G HGHG +AL+LF  ML   I P  +TFL+VL  CSHAGLV EG   F+SM   +G  
Sbjct: 502 ALGQHGHGAQALELFELMLKEDILPDRITFLTVLSTCSHAGLVEEGHRYFKSMSGLYGIC 561

Query: 547 PLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEK 606
           P  +HYA M+D+L RAG+  +A + I+ + VEPGP +W ALL  C IH + +L   A+E+
Sbjct: 562 PGEDHYARMIDLLCRAGKFSEAKDMIETMPVEPGPPIWEALLAGCRIHGNMDLGIQAAER 621

Query: 607 LFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTS 666
           LFEL P++ G +VLLSN+Y+    +   A VR++++ + + K PGC+ IEV    HVF  
Sbjct: 622 LFELMPQHDGTYVLLSNMYATVGRWDDVAKVRKLMRDKGVKKEPGCSWIEVENKVHVFLV 681

Query: 667 GDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGL 726
            D +HP+  A+Y  LE+L  KMR+ G+  +T   LHD+E E+KE ++  HSEKLA+ FGL
Sbjct: 682 DDIVHPEVQAVYNYLEELGLKMRKLGYIPDTKFVLHDMESEQKEYVLSTHSEKLAVGFGL 741

Query: 727 IATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           +    G  +R+ KNLR+C DCH A KF+SKV  R IVVRD  RFHHFK G CSCG+YW
Sbjct: 742 LKLPLGATVRVFKNLRICGDCHNAFKFMSKVVEREIVVRDGKRFHHFKNGECSCGNYW 799



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 148/575 (25%), Positives = 237/575 (41%), Gaps = 101/575 (17%)

Query: 38  QNDLSTVTKLAHRLSDFKATCYARALFFSIPK--PDLFLFNVIIRGFSNNEMPKSSICFY 95
           Q D+   T L    S    +  AR +FF+ P    D   +N +I G+S+N     +I  +
Sbjct: 78  QPDIVARTTLIAAHSSAGNSNLAREIFFATPLGIRDTVCYNAMITGYSHNNDGFGAIELF 137

Query: 96  THLRKNTALTPDNFTYSFVLSAASACC-DRSIGVLLHGHAIVSGYGSDLFVGAALVDLYF 154
             L +N    PDNFT++ VL A +    D      +H   + SG G    V  AL+ ++ 
Sbjct: 138 RDLLRN-GFRPDNFTFTSVLGALALIVEDEKQCQQIHCAVVKSGSGFVTSVLNALLSVFV 196

Query: 155 KFSW---------VKSARKVFDKMPEKD-------------------------------T 174
           K +          + +ARK+FD+M E+D                                
Sbjct: 197 KCASSPLVSSSSLMAAARKLFDEMTERDELSWTTMIAGYVRNGELDAARQFLDGMTEKLV 256

Query: 175 VLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQC 234
           V WN+MISG + +  F +++ +F  M   G  W D  +  +VL A A       G ++  
Sbjct: 257 VAWNAMISGYVHHGFFLEALEMFRKMYLLGIQW-DEFTYTSVLSACANAGFFLHGKQVHA 315

Query: 235 LGLK------LGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTC 288
             L+      L F   + V   L + Y KCG+V+ A  +F  +   DL+S NA++SGY  
Sbjct: 316 YILRTEPRPSLDF--SLSVNNALATLYWKCGKVDEARQVFNQMPVKDLVSWNAILSGYVN 373

Query: 289 -------------------------------NGKTESSLRLFRQLLASAERVNSSTIVGL 317
                                          NG  E SL+LF ++ +           G 
Sbjct: 374 AGRIDEAKSFFEEMPERNLLTWTVMISGLAQNGFGEESLKLFNRMKSEGFEPCDYAFAGA 433

Query: 318 IPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSL 377
           I        L     +H+  ++ G  S+ S   AL T+Y++   +EAA  LF        
Sbjct: 434 IIACAWLAALMHGRQLHAQLVRLGFDSSLSAGNALITMYAKCGVVEAAHCLFLTMPYLDS 493

Query: 378 ASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHEL 437
            SWNAMIA   Q+G   +A+ LF+ M    + P+ +T  ++LS C+  G +  G   H  
Sbjct: 494 VSWNAMIAALGQHGHGAQALELFELMLKEDILPDRITFLTVLSTCSHAGLVEEG---HRY 550

Query: 438 VKSRNFESNIYVS----TALIDMYAKCGNIVEARELFDLMS-HKSEVTWNTMISGYGLHG 492
            KS +    I         +ID+  + G   EA+++ + M        W  +++G  +HG
Sbjct: 551 FKSMSGLYGICPGEDHYARMIDLLCRAGKFSEAKDMIETMPVEPGPPIWEALLAGCRIHG 610

Query: 493 H---GLEALQLFSEML--HSGIRPSGVTFLSVLYA 522
           +   G++A +   E++  H G        LS +YA
Sbjct: 611 NMDLGIQAAERLFELMPQHDGT----YVLLSNMYA 641



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 112/419 (26%), Positives = 164/419 (39%), Gaps = 98/419 (23%)

Query: 107 DNFTYSFVLSAASACCDRSIGVLLHG---HAIV------SGYGSDLFVGAALVDLYFKFS 157
           D FTY+ VLSA +     + G  LHG   HA +            L V  AL  LY+K  
Sbjct: 290 DEFTYTSVLSACA-----NAGFFLHGKQVHAYILRTEPRPSLDFSLSVNNALATLYWKCG 344

Query: 158 WVKSARKVFDKMPEKDTVLWNS-------------------------------MISGLMK 186
            V  AR+VF++MP KD V WN+                               MISGL +
Sbjct: 345 KVDEARQVFNQMPVKDLVSWNAILSGYVNAGRIDEAKSFFEEMPERNLLTWTVMISGLAQ 404

Query: 187 NCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVY 246
           N   ++S+ +F  M   G    D     A++ A A +  L  G ++    ++LGF   + 
Sbjct: 405 NGFGEESLKLFNRMKSEGFEPCDYAFAGAII-ACAWLAALMHGRQLHAQLVRLGFDSSLS 463

Query: 247 VLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLAS- 305
               L++ Y+KCG VE A  LF  +   D +S NAMI+    +G    +L LF  +L   
Sbjct: 464 AGNALITMYAKCGVVEAAHCLFLTMPYLDSVSWNAMIAALGQHGHGAQALELFELMLKED 523

Query: 306 --AERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRL-NEM 362
              +R+   T+              L+ C H+  ++ G         ++S +Y     E 
Sbjct: 524 ILPDRITFLTV--------------LSTCSHAGLVEEG----HRYFKSMSGLYGICPGED 565

Query: 363 EAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSAC 422
             AR                MI    + G   EA  + + M    V P P    ++L+ C
Sbjct: 566 HYAR----------------MIDLLCRAGKFSEAKDMIETM---PVEPGPPIWEALLAGC 606

Query: 423 AQLGAISLGKWVHELVKSRNFE-----SNIYVSTALIDMYAKCGNIVEARELFDLMSHK 476
              G + LG    E    R FE        YV   L +MYA  G   +  ++  LM  K
Sbjct: 607 RIHGNMDLGIQAAE----RLFELMPQHDGTYV--LLSNMYATVGRWDDVAKVRKLMRDK 659



 Score = 41.2 bits (95), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 55/246 (22%), Positives = 105/246 (42%), Gaps = 28/246 (11%)

Query: 27  QTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNE 86
           Q HAQ++  GF + LS    L    +       A  LF ++P  D   +N +I     + 
Sbjct: 448 QLHAQLVRLGFDSSLSAGNALITMYAKCGVVEAAHCLFLTMPYLDSVSWNAMIAALGQHG 507

Query: 87  MPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAI---VSGY---- 139
               ++  +  + K   L PD  T+  VLS  S       G++  GH     +SG     
Sbjct: 508 HGAQALELFELMLKEDIL-PDRITFLTVLSTCS-----HAGLVEEGHRYFKSMSGLYGIC 561

Query: 140 -GSDLFVGAALVDLYFKFSWVKSARKVFDKMP-EKDTVLWNSMISGLM----KNCCFQDS 193
            G D +  A ++DL  +      A+ + + MP E    +W ++++G       +   Q +
Sbjct: 562 PGEDHY--ARMIDLLCRAGKFSEAKDMIETMPVEPGPPIWEALLAGCRIHGNMDLGIQAA 619

Query: 194 IWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGM-------EIQCLGLKLGFHDHVY 246
             +F  M ++ GT++  +++ A +    +V ++R  M       E  C  +++    HV+
Sbjct: 620 ERLFELMPQHDGTYVLLSNMYATVGRWDDVAKVRKLMRDKGVKKEPGCSWIEVENKVHVF 679

Query: 247 VLTGLV 252
           ++  +V
Sbjct: 680 LVDDIV 685


>gi|297597505|ref|NP_001044065.2| Os01g0715700 [Oryza sativa Japonica Group]
 gi|255673627|dbj|BAF05979.2| Os01g0715700 [Oryza sativa Japonica Group]
          Length = 699

 Score =  437 bits (1125), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 212/436 (48%), Positives = 281/436 (64%)

Query: 349 LTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKV 408
           +TA+    +   E +AAR+LFD   ++   +WNAMIAGY   G + EA+ LF EM+ +  
Sbjct: 264 VTAMVGALATGGEADAARELFDGMPQRDHVAWNAMIAGYVHTGRSREALRLFDEMRHAGA 323

Query: 409 APNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARE 468
           A   VT+ S L+ACAQLGA+  GKWVH    SR    ++ + TALIDMY+KCG +  A E
Sbjct: 324 AVGEVTLVSALTACAQLGALERGKWVHSCAHSRGMRLSVTLGTALIDMYSKCGAVAAAME 383

Query: 469 LFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGL 528
           +FD M  ++  TW + +SG  ++G G + L LF  M  +G+ P+GVTF+ VL  CS AGL
Sbjct: 384 VFDSMGERNVYTWTSAVSGLAMNGMGRDCLALFKRMESTGVEPNGVTFVVVLRGCSMAGL 443

Query: 529 VREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALL 588
           V EG   F SM  +HG  P  EHY CMVD+ GRAG+L+ A+ FI G+ +EP   VWGALL
Sbjct: 444 VDEGRACFDSMKSNHGIDPWLEHYGCMVDLYGRAGRLDDAVNFINGMPLEPHEGVWGALL 503

Query: 589 GACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAK 648
            A  IHK+  L + A +KL  ++ +N   HVLLSNIY+  +++   + VR ++K + + K
Sbjct: 504 NASRIHKNVELGKYAMDKLMAIESKNDAAHVLLSNIYADSQNWKGVSNVRNMMKAKGVKK 563

Query: 649 APGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEE 708
            PGC+ IEVGG  H F  G + HP+   I  ML ++N ++R  G+   T   L D+EEE+
Sbjct: 564 VPGCSAIEVGGKVHEFFVGGKTHPRHKEIEMMLAEMNQRLRLQGYIANTKEVLFDIEEED 623

Query: 709 KELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDAN 768
           KE  + +HSEKLAIAFGL+A     EIRI+KNLRVC DCH  TK ISKV  R IV+RD N
Sbjct: 624 KEDAISLHSEKLAIAFGLVALPEDMEIRIVKNLRVCEDCHDYTKMISKVFNREIVMRDRN 683

Query: 769 RFHHFKGGVCSCGDYW 784
           RFHHFK G CSC DYW
Sbjct: 684 RFHHFKDGACSCKDYW 699



 Score =  113 bits (282), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 64/249 (25%), Positives = 126/249 (50%), Gaps = 2/249 (0%)

Query: 245 VYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLA 304
           V  +T +V   +  GE + A  LF  + + D ++ NAMI+GY   G++  +LRLF ++  
Sbjct: 261 VVCVTAMVGALATGGEADAARELFDGMPQRDHVAWNAMIAGYVHTGRSREALRLFDEMRH 320

Query: 305 SAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEA 364
           +   V   T+V  +      G L     +HS     G+  + ++ TAL  +YS+   + A
Sbjct: 321 AGAAVGEVTLVSALTACAQLGALERGKWVHSCAHSRGMRLSVTLGTALIDMYSKCGAVAA 380

Query: 365 ARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQ 424
           A ++FD   E+++ +W + ++G   NG+  + ++LF+ M+++ V PN VT   +L  C+ 
Sbjct: 381 AMEVFDSMGERNVYTWTSAVSGLAMNGMGRDCLALFKRMESTGVEPNGVTFVVVLRGCSM 440

Query: 425 LGAISLGKWVHELVKSRN-FESNIYVSTALIDMYAKCGNIVEARELFDLMS-HKSEVTWN 482
            G +  G+   + +KS +  +  +     ++D+Y + G + +A    + M     E  W 
Sbjct: 441 AGLVDEGRACFDSMKSNHGIDPWLEHYGCMVDLYGRAGRLDDAVNFINGMPLEPHEGVWG 500

Query: 483 TMISGYGLH 491
            +++   +H
Sbjct: 501 ALLNASRIH 509



 Score = 83.2 bits (204), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 81/347 (23%), Positives = 143/347 (41%), Gaps = 52/347 (14%)

Query: 15  LLKGAKTQSQLTQTHAQIIIHGFQNDLS-------TVTKLAHRLSDFKATCYARALFFSI 67
           L   A +Q  L + HA +++ G     S       ++   +    D     YAR L    
Sbjct: 92  LAAAASSQRHLREIHAHLLVSGRIASPSHLAAFLASLASSSSDDDDDGDLSYARLLLPRR 151

Query: 68  PKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSI- 126
           P   L   N ++R  +    P  +   +    ++  L PDN++++F++ AA+A    +  
Sbjct: 152 PA-TLLAHNSLLRALARGRRPHLAFGAF----RDLPLAPDNYSFTFLVRAATALAAAAAS 206

Query: 127 -------------GVLLHGHA--------IVSGYGS-----------------DLFVGAA 148
                          L HGHA         VS Y +                 D+    A
Sbjct: 207 ALDAALIAGSVHASALRHGHAGDPHVQSGAVSMYAAAGDVGAARAAFAEIASPDVVCVTA 266

Query: 149 LVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWL 208
           +V          +AR++FD MP++D V WN+MI+G +     ++++ +F +M R+ G  +
Sbjct: 267 MVGALATGGEADAARELFDGMPQRDHVAWNAMIAGYVHTGRSREALRLFDEM-RHAGAAV 325

Query: 209 DSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLF 268
              ++ + L A A++  L  G  +       G    V + T L+  YSKCG V  A  +F
Sbjct: 326 GEVTLVSALTACAQLGALERGKWVHSCAHSRGMRLSVTLGTALIDMYSKCGAVAAAMEVF 385

Query: 269 RDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIV 315
             +   ++ +  + +SG   NG     L LF+++ ++    N  T V
Sbjct: 386 DSMGERNVYTWTSAVSGLAMNGMGRDCLALFKRMESTGVEPNGVTFV 432



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 46/174 (26%), Positives = 68/174 (39%), Gaps = 32/174 (18%)

Query: 434 VHELVKSRNFESNIYVSTALIDMYAKCGNI------------------------------ 463
           VH          + +V +  + MYA  G++                              
Sbjct: 217 VHASALRHGHAGDPHVQSGAVSMYAAAGDVGAARAAFAEIASPDVVCVTAMVGALATGGE 276

Query: 464 -VEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYA 522
              ARELFD M  +  V WN MI+GY   G   EAL+LF EM H+G     VT +S L A
Sbjct: 277 ADAARELFDGMPQRDHVAWNAMIAGYVHTGRSREALRLFDEMRHAGAAVGEVTLVSALTA 336

Query: 523 CSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLA 576
           C+  G +  G  +  S  H  G +        ++D+  + G +  A+E    + 
Sbjct: 337 CAQLGALERGKWV-HSCAHSRGMRLSVTLGTALIDMYSKCGAVAAAMEVFDSMG 389


>gi|297800728|ref|XP_002868248.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297314084|gb|EFH44507.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 725

 Score =  437 bits (1125), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 225/652 (34%), Positives = 369/652 (56%), Gaps = 38/652 (5%)

Query: 170 PEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLG 229
           P  +++++NS++  L ++   + +I +F   +R+ G   D  S   +L AV++V  L  G
Sbjct: 75  PLPESIVFNSLLRDLSRSGEPRATI-LFYQRIRHVGGRFDRISFPPILKAVSKVSALFEG 133

Query: 230 MEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCN 289
           ME+     K+      +V TGL+  Y+ CG +  A  +F ++ + D+++ N MI  Y   
Sbjct: 134 MELHGFAFKIATLSDPFVETGLMDMYAACGRINYARNVFDEMSQRDVVTWNTMIERYCRF 193

Query: 290 GKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVL 349
           G  + + +LF ++  S    +   +  ++      G++     I+ F +++ +  ++ +L
Sbjct: 194 GLLDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYDFLIENDVRMDTHLL 253

Query: 350 TALSTVY-------------------------------SRLNEMEAARKLFDESSEKSLA 378
           TAL T+Y                               S+   ++ AR +FD++  K L 
Sbjct: 254 TALVTMYAGAGCMDMAMEFFRKMSVRNLFVSTAMVSGYSKAGRLDDARVIFDQTEMKDLV 313

Query: 379 SWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELV 438
            W  MI+ Y ++   +EA+ +F+EM  S + P+ VT+ S++SAC  LG +   KWVH   
Sbjct: 314 CWTTMISAYAESDHPQEALRVFEEMCCSGIKPDVVTMLSVISACVNLGTLDKAKWVHRYT 373

Query: 439 KSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEAL 498
                ES + +  ALI+MYAKCG +  AR++F+ M  ++ V+W++MI+ + +HG   ++L
Sbjct: 374 HLNGLESVLPIDNALINMYAKCGGLDAARDVFEKMPTRNVVSWSSMINAFAMHGEASDSL 433

Query: 499 QLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDI 558
            LF++M    + P+ VTF+ VLY CSH+GLV EG +IF SM  ++   P  EHY CMVD+
Sbjct: 434 SLFAQMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKIEHYGCMVDL 493

Query: 559 LGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYH 618
            GRA  L +ALE I+ + + P   +WG+L+ AC +H +  L  +A++++ +L+P++ G  
Sbjct: 494 FGRANLLREALEVIESMPMAPNVVIWGSLMSACRVHGELELGELAAKRILKLEPDHDGAL 553

Query: 619 VLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIY 678
           VL+SNIY+ E  +     +R +++K+K+ K  G + I++ G  H F  GD+ H QS  IY
Sbjct: 554 VLMSNIYAREYRWDYVRIIRWIMEKKKVFKEKGLSRIDLNGKSHEFLIGDKRHKQSNEIY 613

Query: 679 AMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTE---- 734
             L ++  K++ AG+  +  + L DVEEEEK+ ++  HSEKLA+ FGL+  E   E    
Sbjct: 614 TKLYEVVSKLKLAGYVPDGGSVLVDVEEEEKKDLVLWHSEKLALCFGLMNKEKEEEKGSC 673

Query: 735 --IRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
             IRI+KNLRVC DCH   K +SKV    I+VRD  RFH +K G+CSC DYW
Sbjct: 674 GVIRIVKNLRVCEDCHAFFKLVSKVYELEIIVRDRTRFHRYKDGLCSCRDYW 725



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 128/517 (24%), Positives = 232/517 (44%), Gaps = 36/517 (6%)

Query: 10  NLFLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSI-P 68
           N  L  L   K+ + + Q HA I+     + L++        S      YA  LF SI P
Sbjct: 16  NTILEKLSFCKSLNHIKQLHAHILRTVINHKLNSFLFNLSFSSSSINLSYALNLFSSISP 75

Query: 69  KPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGV 128
            P+  +FN ++R  S +  P+++I FY  +R +     D  ++  +L A S       G+
Sbjct: 76  LPESIVFNSLLRDLSRSGEPRATILFYQRIR-HVGGRFDRISFPPILKAVSKVSALFEGM 134

Query: 129 LLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNC 188
            LHG A      SD FV   L+D+Y     +  AR VFD+M ++D V WN+MI    +  
Sbjct: 135 ELHGFAFKIATLSDPFVETGLMDMYAACGRINYARNVFDEMSQRDVVTWNTMIERYCRFG 194

Query: 189 CFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQ--------------- 233
              ++  +F +M ++     D   +  ++ A      +R    I                
Sbjct: 195 LLDEAFKLFEEM-KDSNVMPDEMILCNIVSACGRTGNMRYNRAIYDFLIENDVRMDTHLL 253

Query: 234 -----------CLGLKLGFH-----DHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLI 277
                      C+ + + F       +++V T +VS YSK G ++ A ++F      DL+
Sbjct: 254 TALVTMYAGAGCMDMAMEFFRKMSVRNLFVSTAMVSGYSKAGRLDDARVIFDQTEMKDLV 313

Query: 278 SCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFC 337
               MIS Y  +   + +LR+F ++  S  + +  T++ +I      G L     +H + 
Sbjct: 314 CWTTMISAYAESDHPQEALRVFEEMCCSGIKPDVVTMLSVISACVNLGTLDKAKWVHRYT 373

Query: 338 LKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAI 397
             +G+ S   +  AL  +Y++   ++AAR +F++   +++ SW++MI  +  +G   +++
Sbjct: 374 HLNGLESVLPIDNALINMYAKCGGLDAARDVFEKMPTRNVVSWSSMINAFAMHGEASDSL 433

Query: 398 SLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVH-ELVKSRNFESNIYVSTALIDM 456
           SLF +M+   V PN VT   +L  C+  G +  GK +   +    N    I     ++D+
Sbjct: 434 SLFAQMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKIEHYGCMVDL 493

Query: 457 YAKCGNIVEARELFDLMSHKSEVT-WNTMISGYGLHG 492
           + +   + EA E+ + M     V  W +++S   +HG
Sbjct: 494 FGRANLLREALEVIESMPMAPNVVIWGSLMSACRVHG 530


>gi|297814598|ref|XP_002875182.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297321020|gb|EFH51441.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 605

 Score =  437 bits (1124), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 222/569 (39%), Positives = 333/569 (58%), Gaps = 5/569 (0%)

Query: 220 VAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKC---GEVERAELLFRDIVRPDL 276
           +++    R  M+IQ   +K    + V   T L++F ++      +  A  LF  +  PD+
Sbjct: 38  ISKCNSERELMQIQAYAIK-SHQEDVSFNTKLINFCTESPTESSMSYARHLFDAMSEPDI 96

Query: 277 ISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSF 336
           +  N++  GY+ +        LF ++L      ++ T   L+        L     +H  
Sbjct: 97  VIFNSIARGYSRSTNPLEVFNLFVEILEDDLLPDNYTFPSLLKACAVAKALEEGRQLHCL 156

Query: 337 CLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEA 396
            +K G+  N  V   L  +Y+   +++AAR +FD   E  +  +NAMI GY +     EA
Sbjct: 157 SMKLGVDDNVYVCPTLINMYTECEDVDAARCVFDRIVEPCVVCYNAMITGYARRNRPNEA 216

Query: 397 ISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDM 456
           +SLF+EMQ   + PN +T+ S+LS+CA LG++ LGKW+HE  K   F   + V+TALIDM
Sbjct: 217 LSLFREMQGKNLKPNEITLLSVLSSCALLGSLDLGKWIHEYAKKHGFCKYVKVNTALIDM 276

Query: 457 YAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTF 516
           +AKCG++ +A  +F+ M +K    W+ MI  Y  HG    ++ +F  M    ++P  +TF
Sbjct: 277 FAKCGSLDDAVSIFENMRYKDTQAWSAMIVAYANHGQAENSMLMFERMRSENVQPDEITF 336

Query: 517 LSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLA 576
           L +L ACSH GLV EG E F  M+H+ G  P  +HY  MVD+LGRAG LE A EFI  L 
Sbjct: 337 LGLLNACSHTGLVEEGREYFSWMVHEFGIVPSIKHYGSMVDLLGRAGHLEDAYEFIDKLP 396

Query: 577 VEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAAT 636
           + P P +W  LL AC  H +  LA   SE++ ELD  + G +V+LSN+Y+  + +    +
Sbjct: 397 ISPTPMLWRILLAACSSHNNLELAEKVSERILELDDSHGGDYVILSNLYARNKKWEAVDS 456

Query: 637 VRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTE 696
           +R+V+K RK  K PGC+ IEV    H F SGD +   +T ++  L+++  +++ AG+  +
Sbjct: 457 LRKVMKDRKAVKVPGCSSIEVNNVVHEFFSGDGVKSATTKLHRALDEMVKELKLAGYVPD 516

Query: 697 TVTALH-DVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFIS 755
           T   +H D+ ++EKE+ ++ HSEKLAIAFGL+ T PGT IR++KNLRVC DCH+A K IS
Sbjct: 517 TSMVVHADMGDQEKEITLRYHSEKLAIAFGLLNTPPGTTIRVVKNLRVCRDCHSAAKLIS 576

Query: 756 KVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
            + GR +V+RD  RFHHF+ G CSC D+W
Sbjct: 577 LIFGRKVVLRDVQRFHHFEDGKCSCRDFW 605



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 103/373 (27%), Positives = 185/373 (49%), Gaps = 22/373 (5%)

Query: 162 ARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVA 221
           AR +FD M E D V++NS+  G  ++    +   +F +++ +     D+ +  ++L A A
Sbjct: 84  ARHLFDAMSEPDIVIFNSIARGYSRSTNPLEVFNLFVEILEDD-LLPDNYTFPSLLKACA 142

Query: 222 EVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNA 281
             + L  G ++ CL +KLG  D+VYV   L++ Y++C +V+ A  +F  IV P ++  NA
Sbjct: 143 VAKALEEGRQLHCLSMKLGVDDNVYVCPTLINMYTECEDVDAARCVFDRIVEPCVVCYNA 202

Query: 282 MISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSG 341
           MI+GY    +   +L LFR++     + N  T++ ++      G L L   IH +  K G
Sbjct: 203 MITGYARRNRPNEALSLFREMQGKNLKPNEITLLSVLSSCALLGSLDLGKWIHEYAKKHG 262

Query: 342 IVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQ 401
                 V TAL  ++++   ++ A  +F+    K   +W+AMI  Y  +G  E ++ +F+
Sbjct: 263 FCKYVKVNTALIDMFAKCGSLDDAVSIFENMRYKDTQAWSAMIVAYANHGQAENSMLMFE 322

Query: 402 EMQASKVAPNPVTVSSILSACAQLGAISLGK----W-VHELVKSRNFESNIYVSTALIDM 456
            M++  V P+ +T   +L+AC+  G +  G+    W VHE         +I    +++D+
Sbjct: 323 RMRSENVQPDEITFLGLLNACSHTGLVEEGREYFSWMVHEF----GIVPSIKHYGSMVDL 378

Query: 457 YAKCGNIVEARELFD-LMSHKSEVTWNTMISGYGLHGHGLEALQLFSEML------HSGI 509
             + G++ +A E  D L    + + W  +++    H + LE  +  SE +      H G 
Sbjct: 379 LGRAGHLEDAYEFIDKLPISPTPMLWRILLAACSSH-NNLELAEKVSERILELDDSHGG- 436

Query: 510 RPSGVTFLSVLYA 522
                  LS LYA
Sbjct: 437 ---DYVILSNLYA 446



 Score =  125 bits (315), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 106/437 (24%), Positives = 202/437 (46%), Gaps = 40/437 (9%)

Query: 5   TPQSRNLFLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDF---KATCYAR 61
            P   N  L L+    ++ +L Q  A   I   Q D+S  TKL +  ++     +  YAR
Sbjct: 28  NPNPPNPIL-LISKCNSERELMQIQA-YAIKSHQEDVSFNTKLINFCTESPTESSMSYAR 85

Query: 62  ALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASAC 121
            LF ++ +PD+ +FN I RG+S +  P      +  + ++  L PDN+T+  +L A +  
Sbjct: 86  HLFDAMSEPDIVIFNSIARGYSRSTNPLEVFNLFVEILEDD-LLPDNYTFPSLLKACAVA 144

Query: 122 CDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMI 181
                G  LH  ++  G   +++V   L+++Y +   V +AR VFD++ E   V +N+MI
Sbjct: 145 KALEEGRQLHCLSMKLGVDDNVYVCPTLINMYTECEDVDAARCVFDRIVEPCVVCYNAMI 204

Query: 182 SGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGF 241
           +G  +     +++ +F +M +      +  ++ +VL + A +  L LG  I     K GF
Sbjct: 205 TGYARRNRPNEALSLFREM-QGKNLKPNEITLLSVLSSCALLGSLDLGKWIHEYAKKHGF 263

Query: 242 HDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQ 301
             +V V T L+  ++KCG ++ A  +F ++   D  + +AMI  Y  +G+ E+S+ +F +
Sbjct: 264 CKYVKVNTALIDMFAKCGSLDDAVSIFENMRYKDTQAWSAMIVAYANHGQAENSMLMFER 323

Query: 302 LLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNE 361
           + +   + +  T +GL           L  C H+  ++ G    S ++     V      
Sbjct: 324 MRSENVQPDEITFLGL-----------LNACSHTGLVEEGREYFSWMVHEFGIV------ 366

Query: 362 MEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSA 421
                         S+  + +M+    + G  E+A     ++    ++P P+    +L+A
Sbjct: 367 -------------PSIKHYGSMVDLLGRAGHLEDAYEFIDKL---PISPTPMLWRILLAA 410

Query: 422 CAQLGAISLGKWVHELV 438
           C+    + L + V E +
Sbjct: 411 CSSHNNLELAEKVSERI 427


>gi|357436397|ref|XP_003588474.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355477522|gb|AES58725.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 668

 Score =  437 bits (1124), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 228/590 (38%), Positives = 348/590 (58%), Gaps = 5/590 (0%)

Query: 199 DMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKC 258
           D++ NG    D T    +L     + +L+ G  +    +   F + + +   ++  Y+KC
Sbjct: 80  DLINNGSLEPDRTIYNKLLKRCTMLGKLKQGKLVHTHLMNSKFRNDLVIKNSILFMYAKC 139

Query: 259 GEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESS---LRLFRQLLASAERVNSSTIV 315
           G +E A  +F ++   D+++  +MI+GY+ +G   S+   L LF +++    R N   + 
Sbjct: 140 GSLEIARQVFDEMCVKDVVTWTSMITGYSQDGYASSATTALVLFLEMVRDGLRPNEFALS 199

Query: 316 GLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEK 375
            L+      G       IH  C K G   N  V ++L  +Y+R  E+  +R +FDE   K
Sbjct: 200 SLVKCCGFLGSCVDGKQIHGCCWKYGFQENVFVGSSLVDMYARCGELRESRLVFDELESK 259

Query: 376 SLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVH 435
           +  SWNA+I+G+ + G  EEA+ LF +MQ         T S++L + +  G++  GKW+H
Sbjct: 260 NEVSWNALISGFARKGEGEEALGLFVKMQREGFGATEFTYSALLCSSSTTGSLEQGKWLH 319

Query: 436 ELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGL 495
             +     +   YV   L+ MYAK GNI +A+++FD +     V+ N+M+ GY  HG G 
Sbjct: 320 AHMMKSGKKLVGYVGNTLLHMYAKSGNICDAKKVFDRLVKVDVVSCNSMLIGYAQHGLGK 379

Query: 496 EALQLFSEM-LHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYAC 554
           EA++LF EM L   I P+ +TFLSVL ACSHAGL+ EG   F+ ++  +G +P   HY  
Sbjct: 380 EAVELFEEMMLWVEIEPNDITFLSVLTACSHAGLLDEGLYYFE-LMKKYGLEPKLSHYTT 438

Query: 555 MVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPEN 614
           +VD+ GRAG L++A  FI+ + +EP   +WGALLGA  +HK+T +   A++K+ ELDP  
Sbjct: 439 VVDLFGRAGLLDQAKSFIEEMPIEPNATIWGALLGASKMHKNTEMGAYAAQKVLELDPFY 498

Query: 615 VGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQS 674
            G H LLSNIY++   +   A VR+ +K   L K P C+ +E+  + H+F++ D  HPQ 
Sbjct: 499 PGAHTLLSNIYASAGQWKDVAKVRKEMKDSGLKKEPACSWVEIENSVHIFSANDISHPQK 558

Query: 675 TAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTE 734
             +Y M E LN K++E G+  +T      V+++EKEL ++ HSEKLA+AF L+ T+PG+ 
Sbjct: 559 NKVYEMWENLNQKIKEIGYVPDTSHVHVFVDQQEKELNLQYHSEKLALAFALLNTKPGSV 618

Query: 735 IRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           IRI+KN+RVC DCH+A K++S V  R I+VRD NRFHHF+ G CSC DYW
Sbjct: 619 IRIMKNIRVCGDCHSAIKYVSLVVKREIIVRDTNRFHHFRDGSCSCRDYW 668



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 127/457 (27%), Positives = 229/457 (50%), Gaps = 14/457 (3%)

Query: 98  LRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFS 157
           L  N +L PD   Y+ +L   +       G L+H H + S + +DL +  +++ +Y K  
Sbjct: 81  LINNGSLEPDRTIYNKLLKRCTMLGKLKQGKLVHTHLMNSKFRNDLVIKNSILFMYAKCG 140

Query: 158 WVKSARKVFDKMPEKDTVLWNSMISGLMKN---CCFQDSIWVFGDMVRNGGTWLDSTSVA 214
            ++ AR+VFD+M  KD V W SMI+G  ++        ++ +F +MVR+ G   +  +++
Sbjct: 141 SLEIARQVFDEMCVKDVVTWTSMITGYSQDGYASSATTALVLFLEMVRD-GLRPNEFALS 199

Query: 215 AVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRP 274
           +++     +     G +I     K GF ++V+V + LV  Y++CGE+  + L+F ++   
Sbjct: 200 SLVKCCGFLGSCVDGKQIHGCCWKYGFQENVFVGSSLVDMYARCGELRESRLVFDELESK 259

Query: 275 DLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIH 334
           + +S NA+ISG+   G+ E +L LF ++          T   L+      G L     +H
Sbjct: 260 NEVSWNALISGFARKGEGEEALGLFVKMQREGFGATEFTYSALLCSSSTTGSLEQGKWLH 319

Query: 335 SFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTE 394
           +  +KSG      V   L  +Y++   +  A+K+FD   +  + S N+M+ GY Q+GL +
Sbjct: 320 AHMMKSGKKLVGYVGNTLLHMYAKSGNICDAKKVFDRLVKVDVVSCNSMLIGYAQHGLGK 379

Query: 395 EAISLFQEMQA-SKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTAL 453
           EA+ LF+EM    ++ PN +T  S+L+AC+  G +  G +  EL+K    E  +   T +
Sbjct: 380 EAVELFEEMMLWVEIEPNDITFLSVLTACSHAGLLDEGLYYFELMKKYGLEPKLSHYTTV 439

Query: 454 IDMYAKCGNIVEARELFDLMSHKSEVT-WNTMISGYGLHGH---GLEALQLFSEMLHSGI 509
           +D++ + G + +A+   + M  +   T W  ++    +H +   G  A Q   E+     
Sbjct: 440 VDLFGRAGLLDQAKSFIEEMPIEPNATIWGALLGASKMHKNTEMGAYAAQKVLEL--DPF 497

Query: 510 RPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFK 546
            P   T LS +YA   AG  ++  ++ + M  D G K
Sbjct: 498 YPGAHTLLSNIYA--SAGQWKDVAKVRKEM-KDSGLK 531



 Score =  109 bits (273), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 110/463 (23%), Positives = 200/463 (43%), Gaps = 59/463 (12%)

Query: 9   RNLFLSLLKGAKTQSQLTQ---THAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFF 65
           R ++  LLK      +L Q    H  ++   F+NDL     +    +   +   AR +F 
Sbjct: 91  RTIYNKLLKRCTMLGKLKQGKLVHTHLMNSKFRNDLVIKNSILFMYAKCGSLEIARQVFD 150

Query: 66  SIPKPDLFLFNVIIRGFSNNEMPKSS----ICFYTHLRKNTALTPDNFTYSFVLSAAS-- 119
            +   D+  +  +I G+S +    S+    + F   +R    L P+ F  S ++      
Sbjct: 151 EMCVKDVVTWTSMITGYSQDGYASSATTALVLFLEMVRD--GLRPNEFALSSLVKCCGFL 208

Query: 120 -ACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWN 178
            +C D   G  +HG     G+  ++FVG++LVD+Y +   ++ +R VFD++  K+ V WN
Sbjct: 209 GSCVD---GKQIHGCCWKYGFQENVFVGSSLVDMYARCGELRESRLVFDELESKNEVSWN 265

Query: 179 SMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLK 238
           ++ISG  +    ++++ +F  M R G    + T  +A+L + +    L  G  +    +K
Sbjct: 266 ALISGFARKGEGEEALGLFVKMQREGFGATEFT-YSALLCSSSTTGSLEQGKWLHAHMMK 324

Query: 239 LGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRL 298
            G     YV   L+  Y+K G +  A+ +F  +V+ D++SCN+M+ GY  +G  + ++ L
Sbjct: 325 SGKKLVGYVGNTLLHMYAKSGNICDAKKVFDRLVKVDVVSCNSMLIGYAQHGLGKEAVEL 384

Query: 299 FRQLLASAE-RVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYS 357
           F +++   E   N  T + +           LT C H+  L  G                
Sbjct: 385 FEEMMLWVEIEPNDITFLSV-----------LTACSHAGLLDEG---------------- 417

Query: 358 RLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSS 417
            L   E  +K      E  L+ +  ++  + + GL ++A S  +EM    + PN     +
Sbjct: 418 -LYYFELMKKY---GLEPKLSHYTTVVDLFGRAGLLDQAKSFIEEM---PIEPNATIWGA 470

Query: 418 ILSACAQLGAISLGKWVHELV--------KSRNFESNIYVSTA 452
           +L A        +G +  + V         +    SNIY S  
Sbjct: 471 LLGASKMHKNTEMGAYAAQKVLELDPFYPGAHTLLSNIYASAG 513


>gi|356575510|ref|XP_003555883.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g04780-like [Glycine max]
          Length = 618

 Score =  437 bits (1124), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 223/560 (39%), Positives = 329/560 (58%), Gaps = 23/560 (4%)

Query: 237 LKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSL 296
           +++G    +     L++ YSKC  V+ A   F ++    L+S N +I   T N +   +L
Sbjct: 70  IRIGLEMDILTSNMLINMYSKCSLVDSARKKFNEMPVKSLVSWNTVIGALTQNAEDREAL 129

Query: 297 RLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNC-----------IHSFCLKSGIVSN 345
           +L  Q+       N  TI  +           L NC           +H+F +K+ I SN
Sbjct: 130 KLLIQMQREGTPFNEFTISSV-----------LCNCAFKCAILECMQLHAFSIKAAIDSN 178

Query: 346 SSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQA 405
             V TAL  VY++ + ++ A ++F+   EK+  +W++M+AGY QNG  EEA+ +F+  Q 
Sbjct: 179 CFVGTALLHVYAKCSSIKDASQMFESMPEKNAVTWSSMMAGYVQNGFHEEALLIFRNAQL 238

Query: 406 SKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVE 465
                +P  +SS +SACA L  +  GK VH +     F SNIYVS++LIDMYAKCG I E
Sbjct: 239 MGFDQDPFMISSAVSACAGLATLIEGKQVHAISHKSGFGSNIYVSSSLIDMYAKCGCIRE 298

Query: 466 ARELFD-LMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACS 524
           A  +F  ++  +S V WN MISG+  H    EA+ LF +M   G  P  VT++ VL ACS
Sbjct: 299 AYLVFQGVLEVRSIVLWNAMISGFARHARAPEAMILFEKMQQRGFFPDDVTYVCVLNACS 358

Query: 525 HAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVW 584
           H GL  EG + F  M+  H   P   HY+CM+DILGRAG + KA + I+ +      ++W
Sbjct: 359 HMGLHEEGQKYFDLMVRQHNLSPSVLHYSCMIDILGRAGLVHKAYDLIERMPFNATSSMW 418

Query: 585 GALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKR 644
           G+LL +C I+ +   A +A++ LFE++P N G H+LL+NIY+A + + + A  R+++++ 
Sbjct: 419 GSLLASCKIYGNIEFAEIAAKYLFEMEPNNAGNHILLANIYAANKKWDEVARARKLLRET 478

Query: 645 KLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDV 704
            + K  G + IE+    H FT G++ HPQ   IYA L+ L  ++++  ++ +T   LHDV
Sbjct: 479 DVRKERGTSWIEIKNKIHSFTVGERNHPQIDDIYAKLDNLVVELKKLNYKVDTSNDLHDV 538

Query: 705 EEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVV 764
           EE  K+++++ HSEKLAI FGL+       IRIIKNLR+C DCHT  K +SK T R I+V
Sbjct: 539 EENRKQMLLRHHSEKLAITFGLMCLPRDIPIRIIKNLRICGDCHTFMKLVSKSTSREIIV 598

Query: 765 RDANRFHHFKGGVCSCGDYW 784
           RD NRFHHFK G CSCG++W
Sbjct: 599 RDTNRFHHFKDGFCSCGEFW 618



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 84/291 (28%), Positives = 144/291 (49%), Gaps = 3/291 (1%)

Query: 334 HSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLT 393
           H+  ++ G+  +      L  +YS+ + +++ARK F+E   KSL SWN +I   TQN   
Sbjct: 66  HAQIIRIGLEMDILTSNMLINMYSKCSLVDSARKKFNEMPVKSLVSWNTVIGALTQNAED 125

Query: 394 EEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTAL 453
            EA+ L  +MQ      N  T+SS+L  CA   AI     +H        +SN +V TAL
Sbjct: 126 REALKLLIQMQREGTPFNEFTISSVLCNCAFKCAILECMQLHAFSIKAAIDSNCFVGTAL 185

Query: 454 IDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSG 513
           + +YAKC +I +A ++F+ M  K+ VTW++M++GY  +G   EAL +F      G     
Sbjct: 186 LHVYAKCSSIKDASQMFESMPEKNAVTWSSMMAGYVQNGFHEEALLIFRNAQLMGFDQDP 245

Query: 514 VTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIK 573
               S + AC+    + EG ++  ++ H  GF       + ++D+  + G + +A    +
Sbjct: 246 FMISSAVSACAGLATLIEGKQV-HAISHKSGFGSNIYVSSSLIDMYAKCGCIREAYLVFQ 304

Query: 574 GLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFE--LDPENVGYHVLLS 622
           G+       +W A++     H     A +  EK+ +    P++V Y  +L+
Sbjct: 305 GVLEVRSIVLWNAMISGFARHARAPEAMILFEKMQQRGFFPDDVTYVCVLN 355



 Score =  122 bits (307), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 89/300 (29%), Positives = 153/300 (51%), Gaps = 13/300 (4%)

Query: 10  NLFLSLLKGAKTQSQL--TQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSI 67
           NL   L   AKT+S +     HAQII  G + D+ T   L +  S       AR  F  +
Sbjct: 45  NLHYLLQLCAKTRSSMGGRACHAQIIRIGLEMDILTSNMLINMYSKCSLVDSARKKFNEM 104

Query: 68  PKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDN-FTYSFVLSAASACCDRSI 126
           P   L  +N +I   + N   + ++     +++    TP N FT S VL   +  C    
Sbjct: 105 PVKSLVSWNTVIGALTQNAEDREALKLLIQMQREG--TPFNEFTISSVLCNCAFKCAILE 162

Query: 127 GVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMK 186
            + LH  +I +   S+ FVG AL+ +Y K S +K A ++F+ MPEK+ V W+SM++G ++
Sbjct: 163 CMQLHAFSIKAAIDSNCFVGTALLHVYAKCSSIKDASQMFESMPEKNAVTWSSMMAGYVQ 222

Query: 187 NCCFQDSIWVFGDMVRNG---GTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHD 243
           N   ++++ +F    RN    G   D   +++ + A A +  L  G ++  +  K GF  
Sbjct: 223 NGFHEEALLIF----RNAQLMGFDQDPFMISSAVSACAGLATLIEGKQVHAISHKSGFGS 278

Query: 244 HVYVLTGLVSFYSKCGEVERAELLFRDIVR-PDLISCNAMISGYTCNGKTESSLRLFRQL 302
           ++YV + L+  Y+KCG +  A L+F+ ++    ++  NAMISG+  + +   ++ LF ++
Sbjct: 279 NIYVSSSLIDMYAKCGCIREAYLVFQGVLEVRSIVLWNAMISGFARHARAPEAMILFEKM 338



 Score = 62.8 bits (151), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 53/206 (25%), Positives = 100/206 (48%), Gaps = 13/206 (6%)

Query: 24  QLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFS 83
           +  Q HA  I     ++    T L H  +   +   A  +F S+P+ +   ++ ++ G+ 
Sbjct: 162 ECMQLHAFSIKAAIDSNCFVGTALLHVYAKCSSIKDASQMFESMPEKNAVTWSSMMAGYV 221

Query: 84  NNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHG---HAIV--SG 138
            N   + ++  +    +N  L   +     + SA SAC    +  L+ G   HAI   SG
Sbjct: 222 QNGFHEEALLIF----RNAQLMGFDQDPFMISSAVSACA--GLATLIEGKQVHAISHKSG 275

Query: 139 YGSDLFVGAALVDLYFKFSWVKSARKVFDKMPE-KDTVLWNSMISGLMKNCCFQDSIWVF 197
           +GS+++V ++L+D+Y K   ++ A  VF  + E +  VLWN+MISG  ++    +++ +F
Sbjct: 276 FGSNIYVSSSLIDMYAKCGCIREAYLVFQGVLEVRSIVLWNAMISGFARHARAPEAMILF 335

Query: 198 GDMVRNGGTWLDSTSVAAVLPAVAEV 223
             M +  G + D  +   VL A + +
Sbjct: 336 EKM-QQRGFFPDDVTYVCVLNACSHM 360



 Score = 59.3 bits (142), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 36/107 (33%), Positives = 54/107 (50%)

Query: 418 ILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKS 477
           +L  CA+  +   G+  H  +     E +I  S  LI+MY+KC  +  AR+ F+ M  KS
Sbjct: 49  LLQLCAKTRSSMGGRACHAQIIRIGLEMDILTSNMLINMYSKCSLVDSARKKFNEMPVKS 108

Query: 478 EVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACS 524
            V+WNT+I     +    EAL+L  +M   G   +  T  SVL  C+
Sbjct: 109 LVSWNTVIGALTQNAEDREALKLLIQMQREGTPFNEFTISSVLCNCA 155


>gi|413932901|gb|AFW67452.1| hypothetical protein ZEAMMB73_642603 [Zea mays]
          Length = 853

 Score =  437 bits (1123), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 236/676 (34%), Positives = 389/676 (57%), Gaps = 4/676 (0%)

Query: 18  GAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNV 77
           GA +  +L    A+ I  G  ND+   + L    +D      AR  F  IP+ D  L+NV
Sbjct: 155 GAMSLGRLVHRTARAI--GLANDVYVGSALVKMYADAGLLGNARDAFDGIPERDCVLWNV 212

Query: 78  IIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVS 137
           ++ G         ++  + ++R  +   P+  T +  LS  +   D   G  LH  A+  
Sbjct: 213 MMDGCIKAGDVDGAVRLFRNMRA-SGCEPNFATLACFLSVCATDADLLSGAQLHSLAVKC 271

Query: 138 GYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVF 197
           G   ++ V   L+ +Y K   +  A ++F+ MP+ D V WN MISG ++N  F ++  +F
Sbjct: 272 GLEPEVAVANTLLAMYAKCQCLDDAWRLFELMPQDDLVTWNGMISGCVQNGLFVEAFGLF 331

Query: 198 GDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSK 257
            DM R+G    DS ++ ++LPA+ ++  L+ G E+    ++   +  V++++ LV  Y K
Sbjct: 332 YDMQRSGAR-PDSITLVSLLPALTDLNGLKQGKEVHGYIVRNCVNMDVFLVSALVDIYFK 390

Query: 258 CGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGL 317
           C +V  A+ L+      D++  + MISGY  NG +E +L++FR LL    + N+ TI  +
Sbjct: 391 CRDVRMAQNLYDAARAIDVVIGSTMISGYVLNGMSEEALQMFRYLLEQCIKPNAVTIASV 450

Query: 318 IPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSL 377
           +P       L L   IH + L++       V +AL  +Y++   ++ +  +F + S+K  
Sbjct: 451 LPGCASMAALPLGQQIHGYVLRNAYERKCYVESALMDMYAKCGRLDLSHYIFLKMSQKDE 510

Query: 378 ASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHEL 437
            +WN+MI+ ++QNG  +EA+ LF++M    +  N +T+S+ LSACA L AI  GK +H +
Sbjct: 511 VTWNSMISSFSQNGKPQEALDLFRQMCMEGIKYNNITISAALSACASLPAIYYGKEIHGV 570

Query: 438 VKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEA 497
                 +++I+  +ALIDMYAKCGN+  A  +F+ M  K+EV+WN++IS YG HG   E+
Sbjct: 571 TIKGPIKADIFAESALIDMYAKCGNLELALRVFEFMPDKNEVSWNSIISAYGAHGLVKES 630

Query: 498 LQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVD 557
           + L   M   G +P  VTFL+++ AC+HAGLV EG ++FQ M   +   P  EH+ACMVD
Sbjct: 631 VSLLHGMQEEGYKPDHVTFLALISACAHAGLVEEGVQLFQCMTKKYLIAPRMEHFACMVD 690

Query: 558 ILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGY 617
           +  R+G+L+KA++FI  +  +P   +WGALL AC +H++  LA +AS++LF+LDP N GY
Sbjct: 691 LYSRSGKLDKAIQFIADMPFKPDAGIWGALLHACRVHRNVELADIASQELFKLDPANSGY 750

Query: 618 HVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAI 677
           +VL+SNI +    +   + VR+++K  K+ K PG + ++V  + H+F + D+ HP+S  I
Sbjct: 751 YVLMSNINAVAGRWDGVSKVRRLMKDNKILKIPGYSWVDVNNSSHLFVASDKSHPESEDI 810

Query: 678 YAMLEKLNGKMREAGF 693
           Y  L+ L  ++RE G+
Sbjct: 811 YTSLKTLLQELREEGY 826



 Score =  275 bits (704), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 183/606 (30%), Positives = 310/606 (51%), Gaps = 31/606 (5%)

Query: 8   SRNLFLSLLKGAKTQSQLT---QTHAQIIIHGF---QNDLSTVTKL------AHRLSDFK 55
           S +  L++L+G  +   L    Q HA+ ++ G     N L+  T+L      A R  D  
Sbjct: 31  SADRLLAVLRGCVSAPHLPLGLQIHARAVVSGALSDHNHLALHTRLLGMYVLARRFRD-- 88

Query: 56  ATCYARALFFSIPKP---DLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTAL-TPDNFTY 111
               A A+F ++P+        +N +IRGF+       ++ FY  +  + A  +PD  T 
Sbjct: 89  ----AVAVFSALPRAAAASSLPWNWLIRGFTAAGQHHLAVLFYVKMWSHPAAPSPDAHTL 144

Query: 112 SFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPE 171
            +V+ + +A    S+G L+H  A   G  +D++VG+ALV +Y     + +AR  FD +PE
Sbjct: 145 PYVVKSCAALGAMSLGRLVHRTARAIGLANDVYVGSALVKMYADAGLLGNARDAFDGIPE 204

Query: 172 KDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGME 231
           +D VLWN M+ G +K      ++ +F +M R  G   +  ++A  L   A   +L  G +
Sbjct: 205 RDCVLWNVMMDGCIKAGDVDGAVRLFRNM-RASGCEPNFATLACFLSVCATDADLLSGAQ 263

Query: 232 IQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGK 291
           +  L +K G    V V   L++ Y+KC  ++ A  LF  + + DL++ N MISG   NG 
Sbjct: 264 LHSLAVKCGLEPEVAVANTLLAMYAKCQCLDDAWRLFELMPQDDLVTWNGMISGCVQNGL 323

Query: 292 TESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTA 351
              +  LF  +  S  R +S T+V L+P       L     +H + +++ +  +  +++A
Sbjct: 324 FVEAFGLFYDMQRSGARPDSITLVSLLPALTDLNGLKQGKEVHGYIVRNCVNMDVFLVSA 383

Query: 352 LSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPN 411
           L  +Y +  ++  A+ L+D +    +   + MI+GY  NG++EEA+ +F+ +    + PN
Sbjct: 384 LVDIYFKCRDVRMAQNLYDAARAIDVVIGSTMISGYVLNGMSEEALQMFRYLLEQCIKPN 443

Query: 412 PVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFD 471
            VT++S+L  CA + A+ LG+ +H  V    +E   YV +AL+DMYAKCG +  +  +F 
Sbjct: 444 AVTIASVLPGCASMAALPLGQQIHGYVLRNAYERKCYVESALMDMYAKCGRLDLSHYIFL 503

Query: 472 LMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVRE 531
            MS K EVTWN+MIS +  +G   EAL LF +M   GI+ + +T  + L AC+    +  
Sbjct: 504 KMSQKDEVTWNSMISSFSQNGKPQEALDLFRQMCMEGIKYNNITISAALSACASLPAIYY 563

Query: 532 GDEIFQSMIHDHGFKPL-AEHYA--CMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALL 588
           G EI    I      P+ A+ +A   ++D+  + G LE AL   + +  +     W +++
Sbjct: 564 GKEIHGVTIK----GPIKADIFAESALIDMYAKCGNLELALRVFEFMP-DKNEVSWNSII 618

Query: 589 GACMIH 594
            A   H
Sbjct: 619 SAYGAH 624


>gi|125551253|gb|EAY96962.1| hypothetical protein OsI_18881 [Oryza sativa Indica Group]
          Length = 822

 Score =  437 bits (1123), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 234/650 (36%), Positives = 381/650 (58%), Gaps = 15/650 (2%)

Query: 139 YGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFG 198
           +G+D+ VG+AL+D+  +   + SARKVFD + EK  V+W  +IS  ++  C ++++ +F 
Sbjct: 184 WGTDVAVGSALIDMLARNGDLASARKVFDGLIEKTVVVWTLLISRYVQGECAEEAVELFL 243

Query: 199 DMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKC 258
           D + +G    D  ++++++ A  E+  +RLG+++  L L++G      V  GLV  Y+K 
Sbjct: 244 DFLEDGFE-PDRYTMSSMISACTELGSVRLGLQLHSLALRMGLASDACVSCGLVDMYAKS 302

Query: 259 G---EVERAELLFRDIVRPDLISCNAMISGYTCNGKTESS-LRLFRQLLASAERVNSSTI 314
                ++ A  +F  + + D+IS  A+ISGY  +G  E+  + LF ++L  + + N  T 
Sbjct: 303 NIGQAMDYANKVFERMPKNDVISWTALISGYVQSGVQENKVMALFGEMLNESIKPNHITY 362

Query: 315 VGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSE 374
             ++              +H+  +KS   S  +V  AL ++Y+    ME AR++F++  E
Sbjct: 363 SSILKSCASISDHDSGRQVHAHVIKSNQASAHTVGNALVSMYAESGCMEEARRVFNQLYE 422

Query: 375 KSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWV 434
           +S      MI   T+         L   +    V  +  T +S++SA A +G ++ G+ +
Sbjct: 423 RS------MIPCITEG----RDFPLDHRIVRMDVGISSSTFASLISAAASVGMLTKGQQL 472

Query: 435 HELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHG 494
           H +     F S+ +VS +L+ MY++CG + +A   F+ +  ++ ++W +MISG   HG+ 
Sbjct: 473 HAMSLKAGFGSDRFVSNSLVSMYSRCGYLEDACRSFNELKDRNVISWTSMISGLAKHGYA 532

Query: 495 LEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYAC 554
             AL LF +M+ +G++P+ VT+++VL ACSH GLVREG E F+SM  DHG  P  EHYAC
Sbjct: 533 ERALSLFHDMILTGVKPNDVTYIAVLSACSHVGLVREGKEYFRSMQRDHGLIPRMEHYAC 592

Query: 555 MVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPEN 614
           MVD+L R+G +++ALEFI  + ++    VW  LLGAC  H +  +  + ++ + EL+P +
Sbjct: 593 MVDLLARSGIVKEALEFINEMPLKADALVWKTLLGACRSHDNIEVGEITAKNVVELEPRD 652

Query: 615 VGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQS 674
              +VLLSN+Y+    + + A +R  ++   L K  G + +EV  T H F +GD  HP++
Sbjct: 653 PAPYVLLSNLYADAGLWDEVARIRSAMRDNNLNKETGLSWMEVENTTHEFRAGDTSHPRA 712

Query: 675 TAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTE 734
             IY  L+ L  +++  G+  +T   LHD+ +E KE  +  HSEK+A+AFGLI T     
Sbjct: 713 QDIYGKLDTLVRQIKGMGYVPDTSIVLHDMSDELKEQYLLQHSEKIAVAFGLITTSAPKP 772

Query: 735 IRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           IRI KNLRVC DCH+A K++SK T R I++RD+NRFH  K G CSCG+YW
Sbjct: 773 IRIFKNLRVCADCHSAIKYMSKATRREIILRDSNRFHRMKDGECSCGEYW 822



 Score =  139 bits (349), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 122/433 (28%), Positives = 203/433 (46%), Gaps = 17/433 (3%)

Query: 142 DLFVGAALVDLYFKFSWVKSARKVFDKMPE-KDTVLWNSMISGLMKNCCFQDSIWVFGDM 200
           D  V  +L+ LY +   V SAR VFD M   +D V W +M S L +N   + S+ + G+M
Sbjct: 83  DAVVANSLLTLYSRCGAVASARNVFDGMRGLRDIVSWTAMASCLARNGAERGSLLLIGEM 142

Query: 201 VRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLG-FHDHVYVLTGLVSFYSKCG 259
           + +G      T  AA            +G  +  L  K+G +   V V + L+   ++ G
Sbjct: 143 LESGLLPNAYTLCAAAHACFPHELYCLVGGVVLGLVHKMGLWGTDVAVGSALIDMLARNG 202

Query: 260 EVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIP 319
           ++  A  +F  ++   ++    +IS Y      E ++ LF   L      +  T+  +I 
Sbjct: 203 DLASARKVFDGLIEKTVVVWTLLISRYVQGECAEEAVELFLDFLEDGFEPDRYTMSSMIS 262

Query: 320 VFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLN---EMEAARKLFDESSEKS 376
                G + L   +HS  L+ G+ S++ V   L  +Y++ N    M+ A K+F+   +  
Sbjct: 263 ACTELGSVRLGLQLHSLALRMGLASDACVSCGLVDMYAKSNIGQAMDYANKVFERMPKND 322

Query: 377 LASWNAMIAGYTQNGLTEEAI-SLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVH 435
           + SW A+I+GY Q+G+ E  + +LF EM    + PN +T SSIL +CA +     G+ VH
Sbjct: 323 VISWTALISGYVQSGVQENKVMALFGEMLNESIKPNHITYSSILKSCASISDHDSGRQVH 382

Query: 436 ELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGL 495
             V   N  S   V  AL+ MYA+ G + EAR +F+ +  +S +   T    + L  H +
Sbjct: 383 AHVIKSNQASAHTVGNALVSMYAESGCMEEARRVFNQLYERSMIPCITEGRDFPLD-HRI 441

Query: 496 EALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACM 555
             + +       GI  S  TF S++ A +  G++ +G ++  +M    GF         +
Sbjct: 442 VRMDV-------GISSS--TFASLISAAASVGMLTKGQQL-HAMSLKAGFGSDRFVSNSL 491

Query: 556 VDILGRAGQLEKA 568
           V +  R G LE A
Sbjct: 492 VSMYSRCGYLEDA 504



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 100/414 (24%), Positives = 182/414 (43%), Gaps = 54/414 (13%)

Query: 55  KATCYARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFV 114
           +A  YA  +F  +PK D+  +  +I G+  + + ++ +        N ++ P++ TYS +
Sbjct: 306 QAMDYANKVFERMPKNDVISWTALISGYVQSGVQENKVMALFGEMLNESIKPNHITYSSI 365

Query: 115 LSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDT 174
           L + ++  D   G  +H H I S   S   VG ALV +Y +   ++ AR+VF+++ E+  
Sbjct: 366 LKSCASISDHDSGRQVHAHVIKSNQASAHTVGNALVSMYAESGCMEEARRVFNQLYER-- 423

Query: 175 VLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQC 234
               SMI      C  +   +     +      + S++ A+++ A A V  L  G ++  
Sbjct: 424 ----SMIP-----CITEGRDFPLDHRIVRMDVGISSSTFASLISAAASVGMLTKGQQLHA 474

Query: 235 LGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTES 294
           + LK GF    +V   LVS YS+CG +E A   F ++   ++IS  +MISG   +G  E 
Sbjct: 475 MSLKAGFGSDRFVSNSLVSMYSRCGYLEDACRSFNELKDRNVISWTSMISGLAKHGYAER 534

Query: 295 SLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALST 354
           +L LF  ++ +  + N  T + +           L+ C H   ++ G         ++  
Sbjct: 535 ALSLFHDMILTGVKPNDVTYIAV-----------LSACSHVGLVREG----KEYFRSMQR 579

Query: 355 VYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVT 414
            +  +  ME                +  M+    ++G+ +EA+    EM    +  + + 
Sbjct: 580 DHGLIPRME---------------HYACMVDLLARSGIVKEALEFINEM---PLKADALV 621

Query: 415 VSSILSACAQLGAISLG----KWVHELVKSRN-----FESNIYVSTALIDMYAK 459
             ++L AC     I +G    K V EL + R+       SN+Y    L D  A+
Sbjct: 622 WKTLLGACRSHDNIEVGEITAKNVVEL-EPRDPAPYVLLSNLYADAGLWDEVAR 674



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 66/212 (31%), Positives = 109/212 (51%), Gaps = 4/212 (1%)

Query: 325 GHLHLTNCIHSFCLKSGIVSNSSVL-TALSTVYSRLNEMEAARKLFDE-SSEKSLASWNA 382
           G L L   +H   L+  ++   +V+  +L T+YSR   + +AR +FD     + + SW A
Sbjct: 62  GDLRLGRALHRRLLRGDLLDRDAVVANSLLTLYSRCGAVASARNVFDGMRGLRDIVSWTA 121

Query: 383 MIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSAC--AQLGAISLGKWVHELVKS 440
           M +   +NG    ++ L  EM  S + PN  T+ +   AC   +L  +  G  +  + K 
Sbjct: 122 MASCLARNGAERGSLLLIGEMLESGLLPNAYTLCAAAHACFPHELYCLVGGVVLGLVHKM 181

Query: 441 RNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQL 500
             + +++ V +ALIDM A+ G++  AR++FD +  K+ V W  +IS Y       EA++L
Sbjct: 182 GLWGTDVAVGSALIDMLARNGDLASARKVFDGLIEKTVVVWTLLISRYVQGECAEEAVEL 241

Query: 501 FSEMLHSGIRPSGVTFLSVLYACSHAGLVREG 532
           F + L  G  P   T  S++ AC+  G VR G
Sbjct: 242 FLDFLEDGFEPDRYTMSSMISACTELGSVRLG 273



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 54/182 (29%), Positives = 92/182 (50%), Gaps = 6/182 (3%)

Query: 411 NPVTVSSILSACAQLGAISLGKWVHE-LVKSRNFESNIYVSTALIDMYAKCGNIVEAREL 469
           +P  VS++L+A A+ G + LG+ +H  L++    + +  V+ +L+ +Y++CG +  AR +
Sbjct: 47  HPSDVSALLAAAARAGDLRLGRALHRRLLRGDLLDRDAVVANSLLTLYSRCGAVASARNV 106

Query: 470 FDLMSH-KSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGL 528
           FD M   +  V+W  M S    +G    +L L  EML SG+ P+  T  +  +AC    L
Sbjct: 107 FDGMRGLRDIVSWTAMASCLARNGAERGSLLLIGEMLESGLLPNAYTLCAAAHACFPHEL 166

Query: 529 VREGDEIFQSMIHDHGF--KPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGA 586
                 +   ++H  G     +A   A ++D+L R G L  A +   GL +E    VW  
Sbjct: 167 YCLVGGVVLGLVHKMGLWGTDVAVGSA-LIDMLARNGDLASARKVFDGL-IEKTVVVWTL 224

Query: 587 LL 588
           L+
Sbjct: 225 LI 226


>gi|449470104|ref|XP_004152758.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g25360-like [Cucumis sativus]
 gi|449504088|ref|XP_004162249.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g25360-like [Cucumis sativus]
          Length = 797

 Score =  437 bits (1123), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 264/779 (33%), Positives = 389/779 (49%), Gaps = 117/779 (15%)

Query: 121 CCDR-----SIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPE---- 171
           CC +     S+   +HGH I SG+     +   L+D+Y+K S    ARK+FD++P+    
Sbjct: 21  CCPQNLSSYSLARTVHGHVIASGFKLRGHIVNRLIDIYWKSSDFVYARKLFDEIPQPDVI 80

Query: 172 -----------------------------KDTVLWNSMISGLMKNCCFQDSIWVFGDMVR 202
                                        +DTV +N+MI+G         +I +F  M R
Sbjct: 81  ARTTLITAYSALGNLKMAREIFNETPLDMRDTVFYNAMITGYSHMNDGHSAIELFRAM-R 139

Query: 203 NGGTWLDSTSVAAVLPAVAEV--QELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKC-- 258
                 D  + A+VL A   +   E + G ++    +K G      VL  L+S Y KC  
Sbjct: 140 WANFQPDDFTFASVLSASTLIFYDERQCG-QMHGTVVKFGIEIFPAVLNALLSVYVKCAS 198

Query: 259 --------------------------------------GEVERAELLFRDIVRPDLISCN 280
                                                 G++  A  +   +     I+ N
Sbjct: 199 SPLVSSSSLMASARKLFDEMPKRNEFIWTTLITGYVRNGDLTGAREILDTMTEQPGIAWN 258

Query: 281 AMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKS 340
           AMISGY  +G  E +L LFR++     +V+ ST   +I      G   L   +H++ LK+
Sbjct: 259 AMISGYLHHGLFEDALTLFRKMRLLGVQVDESTYTSVISACADGGFFLLGKQVHAYILKN 318

Query: 341 GIVSNS----SVLTALSTVYSRLNEMEAARKLFDESS----------------------- 373
            +  +     SV   L T+Y +  +++ ARK+F E                         
Sbjct: 319 ELNPDRDFLLSVGNTLITLYWKYGKVDGARKIFYEMPVKDIITWNTLLSGYVNAGRMEEA 378

Query: 374 --------EKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQL 425
                   EK+L +W  MI+G  QNG  E+A+ LF +M+     PN    +  ++AC+ L
Sbjct: 379 KSFFAQMPEKNLLTWTVMISGLAQNGFGEQALKLFNQMKLDGYEPNDYAFAGAITACSVL 438

Query: 426 GAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMI 485
           GA+  G+ +H  +     +S + V  A+I MYA+CG +  AR +F  M     V+WN+MI
Sbjct: 439 GALENGRQLHAQIVHLGHDSTLSVGNAMITMYARCGIVEAARTMFLTMPFVDPVSWNSMI 498

Query: 486 SGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGF 545
           +  G HGHG++A++L+ +ML  GI P   TFL+VL ACSHAGLV EG+  F SM+ ++G 
Sbjct: 499 AALGQHGHGVKAIELYEQMLKEGILPDRRTFLTVLSACSHAGLVEEGNRYFNSMLENYGI 558

Query: 546 KPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASE 605
            P  +HYA M+D+  RAG+   A   I  +  E    +W ALL  C  H + +L   A+E
Sbjct: 559 APGEDHYARMIDLFCRAGKFSDAKNVIDSMPFEARAPIWEALLAGCRTHGNMDLGIEAAE 618

Query: 606 KLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFT 665
           KLF+L P++ G +VLLSN+Y++   +   A  R++++ R + K P C+  EV    HVF 
Sbjct: 619 KLFKLIPQHDGTYVLLSNMYASLGRWNDVARTRKLMRDRGVKKEPACSWTEVENKVHVFL 678

Query: 666 SGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFG 725
             D +HP+  +IY  LEKLN +M++ G+  +T   LHD+E E KE  +  HSEKLA+AFG
Sbjct: 679 VDDTVHPEVLSIYNYLEKLNLEMKKIGYIPDTKYVLHDMESEHKEYALSTHSEKLAVAFG 738

Query: 726 LIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           L+    G  +R+ KNLR+C DCH A KF+SKV GR IVVRD  RFHHFK G CSC +YW
Sbjct: 739 LMKLPQGATVRVFKNLRICGDCHNAIKFMSKVVGREIVVRDGKRFHHFKNGECSCRNYW 797



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 154/615 (25%), Positives = 264/615 (42%), Gaps = 132/615 (21%)

Query: 29  HAQIIIHGFQNDLSTVTKLAH---RLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSN- 84
           H  +I  GF+     V +L     + SDF    YAR LF  IP+PD+     +I  +S  
Sbjct: 36  HGHVIASGFKLRGHIVNRLIDIYWKSSDF---VYARKLFDEIPQPDVIARTTLITAYSAL 92

Query: 85  ----------NEMP---------KSSICFYTHLRKNTA------------LTPDNFTYSF 113
                     NE P          + I  Y+H+    +              PD+FT++ 
Sbjct: 93  GNLKMAREIFNETPLDMRDTVFYNAMITGYSHMNDGHSAIELFRAMRWANFQPDDFTFAS 152

Query: 114 VLSAASACC--DRSIGVLLHGHAIVSGYGSDLF--VGAALVDLYFK---------FSWVK 160
           VLSA++     +R  G +   H  V  +G ++F  V  AL+ +Y K          S + 
Sbjct: 153 VLSASTLIFYDERQCGQM---HGTVVKFGIEIFPAVLNALLSVYVKCASSPLVSSSSLMA 209

Query: 161 SARKVFDKMPEKDT-------------------------------VLWNSMISGLMKNCC 189
           SARK+FD+MP+++                                + WN+MISG + +  
Sbjct: 210 SARKLFDEMPKRNEFIWTTLITGYVRNGDLTGAREILDTMTEQPGIAWNAMISGYLHHGL 269

Query: 190 FQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFH-DHVYVL 248
           F+D++ +F  M R  G  +D ++  +V+ A A+     LG ++    LK   + D  ++L
Sbjct: 270 FEDALTLFRKM-RLLGVQVDESTYTSVISACADGGFFLLGKQVHAYILKNELNPDRDFLL 328

Query: 249 T---GLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTC----------------- 288
           +    L++ Y K G+V+ A  +F ++   D+I+ N ++SGY                   
Sbjct: 329 SVGNTLITLYWKYGKVDGARKIFYEMPVKDIITWNTLLSGYVNAGRMEEAKSFFAQMPEK 388

Query: 289 --------------NGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIH 334
                         NG  E +L+LF Q+       N     G I      G L     +H
Sbjct: 389 NLLTWTVMISGLAQNGFGEQALKLFNQMKLDGYEPNDYAFAGAITACSVLGALENGRQLH 448

Query: 335 SFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTE 394
           +  +  G  S  SV  A+ T+Y+R   +EAAR +F         SWN+MIA   Q+G   
Sbjct: 449 AQIVHLGHDSTLSVGNAMITMYARCGIVEAARTMFLTMPFVDPVSWNSMIAALGQHGHGV 508

Query: 395 EAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLG-KWVHELVKSRNFESNIYVSTAL 453
           +AI L+++M    + P+  T  ++LSAC+  G +  G ++ + ++++            +
Sbjct: 509 KAIELYEQMLKEGILPDRRTFLTVLSACSHAGLVEEGNRYFNSMLENYGIAPGEDHYARM 568

Query: 454 IDMYAKCGNIVEARELFDLMSHKSEV-TWNTMISGYGLHGH---GLEALQLFSEML--HS 507
           ID++ + G   +A+ + D M  ++    W  +++G   HG+   G+EA +   +++  H 
Sbjct: 569 IDLFCRAGKFSDAKNVIDSMPFEARAPIWEALLAGCRTHGNMDLGIEAAEKLFKLIPQHD 628

Query: 508 GIRPSGVTFLSVLYA 522
           G        LS +YA
Sbjct: 629 GT----YVLLSNMYA 639



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 103/449 (22%), Positives = 185/449 (41%), Gaps = 75/449 (16%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNN--------------EMP----KSSICFYTH---- 97
           AR LF  +PK + F++  +I G+  N              E P     + I  Y H    
Sbjct: 211 ARKLFDEMPKRNEFIWTTLITGYVRNGDLTGAREILDTMTEQPGIAWNAMISGYLHHGLF 270

Query: 98  ------LRKNTAL--TPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSD----LFV 145
                  RK   L    D  TY+ V+SA +      +G  +H + + +    D    L V
Sbjct: 271 EDALTLFRKMRLLGVQVDESTYTSVISACADGGFFLLGKQVHAYILKNELNPDRDFLLSV 330

Query: 146 GAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNS-------------------------- 179
           G  L+ LY+K+  V  ARK+F +MP KD + WN+                          
Sbjct: 331 GNTLITLYWKYGKVDGARKIFYEMPVKDIITWNTLLSGYVNAGRMEEAKSFFAQMPEKNL 390

Query: 180 -----MISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQC 234
                MISGL +N   + ++ +F  M  +G    D  + A  + A + +  L  G ++  
Sbjct: 391 LTWTVMISGLAQNGFGEQALKLFNQMKLDGYEPND-YAFAGAITACSVLGALENGRQLHA 449

Query: 235 LGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTES 294
             + LG    + V   +++ Y++CG VE A  +F  +   D +S N+MI+    +G    
Sbjct: 450 QIVHLGHDSTLSVGNAMITMYARCGIVEAARTMFLTMPFVDPVSWNSMIAALGQHGHGVK 509

Query: 295 SLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKS-GIVSNSSVLTALS 353
           ++ L+ Q+L      +  T + ++      G +   N   +  L++ GI         + 
Sbjct: 510 AIELYEQMLKEGILPDRRTFLTVLSACSHAGLVEEGNRYFNSMLENYGIAPGEDHYARMI 569

Query: 354 TVYSRLNEMEAARKLFDESSEKSLAS-WNAMIAGYTQNGLTEEAISLFQEMQASKVAPNP 412
            ++ R  +   A+ + D    ++ A  W A++AG   +G  +  I   +++   K+ P  
Sbjct: 570 DLFCRAGKFSDAKNVIDSMPFEARAPIWEALLAGCRTHGNMDLGIEAAEKL--FKLIPQH 627

Query: 413 VTVSSILSACAQLGAISLGKWVHELVKSR 441
                +LS        SLG+W +++ ++R
Sbjct: 628 DGTYVLLSNMYA----SLGRW-NDVARTR 651


>gi|294463969|gb|ADE77505.1| unknown [Picea sitchensis]
          Length = 514

 Score =  437 bits (1123), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 221/482 (45%), Positives = 302/482 (62%), Gaps = 31/482 (6%)

Query: 334 HSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMI--------- 384
           H++ +K G  S+  V TAL  +Y+R   +E A  +FD+ SE+S  +WNAMI         
Sbjct: 33  HNYIIKMGFESDVVVQTALVHMYARCGSLEDAGHVFDKMSERSTRTWNAMITGHAQNRDM 92

Query: 385 ----------------------AGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSAC 422
                                 AGY QNG  +E++++F +M+ + +  +   + S+LSAC
Sbjct: 93  KKALKLFYEMSERDVVSWTAVIAGYAQNGYGDESLNVFNQMRKTGMKSDRFIMGSVLSAC 152

Query: 423 AQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWN 482
           A L A+ LG+  H  V    F  +I V +AL+DMYAK G++ +A ++FD M  ++EV+WN
Sbjct: 153 ADLAALELGRQFHAYVVQSGFALDIVVGSALVDMYAKSGSMEDACQVFDKMPQRNEVSWN 212

Query: 483 TMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHD 542
           ++I+G   HG G +A+ LF +ML +GI+P+ ++F+ VL ACSH GLV EG   F  M  +
Sbjct: 213 SIITGCAQHGRGNDAVLLFEQMLQAGIKPNEISFVGVLSACSHTGLVNEGRGYFNLMTQN 272

Query: 543 HGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARV 602
           +G  P   HY CM+D+LGRAG L++A  FI G+ VEP  +VWGALLGAC IH +T LA+ 
Sbjct: 273 YGIVPDVSHYTCMIDLLGRAGCLDEAENFINGMPVEPDVSVWGALLGACRIHGNTELAKR 332

Query: 603 ASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPH 662
            +E L  ++ +  G +VLLSNIY+A   +  AA VR+++K R + K PG + IEV    H
Sbjct: 333 IAEHLLGMEVQIAGIYVLLSNIYAAAGQWDDAAKVRKLMKDRGVMKQPGYSWIEVKTIMH 392

Query: 663 VFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAI 722
            F +G+  HPQ   I+  LE L+ KM+ AG+       L DVE++EKEL +  HSEKLAI
Sbjct: 393 AFVAGETSHPQLKEIHEFLESLSRKMKAAGYVPNKNFVLQDVEDDEKELSLSHHSEKLAI 452

Query: 723 AFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGD 782
           AFG+I T PGT IR+ KNLRVC DCHT  KFIS    R IVVRDANRFHHFK G CSCGD
Sbjct: 453 AFGIINTNPGTTIRVAKNLRVCGDCHTVIKFISLNFTRKIVVRDANRFHHFKDGRCSCGD 512

Query: 783 YW 784
           YW
Sbjct: 513 YW 514



 Score =  129 bits (323), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 83/347 (23%), Positives = 169/347 (48%), Gaps = 34/347 (9%)

Query: 212 SVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVE--------- 262
           +++ V+ A A +  L  G +     +K+GF   V V T LV  Y++CG +E         
Sbjct: 12  TLSTVVKACASIASLEQGKQAHNYIIKMGFESDVVVQTALVHMYARCGSLEDAGHVFDKM 71

Query: 263 ----------------------RAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFR 300
                                 +A  LF ++   D++S  A+I+GY  NG  + SL +F 
Sbjct: 72  SERSTRTWNAMITGHAQNRDMKKALKLFYEMSERDVVSWTAVIAGYAQNGYGDESLNVFN 131

Query: 301 QLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLN 360
           Q+  +  + +   +  ++        L L    H++ ++SG   +  V +AL  +Y++  
Sbjct: 132 QMRKTGMKSDRFIMGSVLSACADLAALELGRQFHAYVVQSGFALDIVVGSALVDMYAKSG 191

Query: 361 EMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILS 420
            ME A ++FD+  +++  SWN++I G  Q+G   +A+ LF++M  + + PN ++   +LS
Sbjct: 192 SMEDACQVFDKMPQRNEVSWNSIITGCAQHGRGNDAVLLFEQMLQAGIKPNEISFVGVLS 251

Query: 421 ACAQLGAISLGK-WVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEV 479
           AC+  G ++ G+ + + + ++     ++   T +ID+  + G + EA    + M  + +V
Sbjct: 252 ACSHTGLVNEGRGYFNLMTQNYGIVPDVSHYTCMIDLLGRAGCLDEAENFINGMPVEPDV 311

Query: 480 T-WNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGV-TFLSVLYACS 524
           + W  ++    +HG+   A ++   +L   ++ +G+   LS +YA +
Sbjct: 312 SVWGALLGACRIHGNTELAKRIAEHLLGMEVQIAGIYVLLSNIYAAA 358



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 67/253 (26%), Positives = 119/253 (47%), Gaps = 35/253 (13%)

Query: 403 MQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGN 462
           M    V PN  T+S+++ ACA + ++  GK  H  +    FES++ V TAL+ MYA+CG+
Sbjct: 1   MVGKGVKPNQFTLSTVVKACASIASLEQGKQAHNYIIKMGFESDVVVQTALVHMYARCGS 60

Query: 463 IVEARELFDLMSHKSEVTWNTMIS-------------------------------GYGLH 491
           + +A  +FD MS +S  TWN MI+                               GY  +
Sbjct: 61  LEDAGHVFDKMSERSTRTWNAMITGHAQNRDMKKALKLFYEMSERDVVSWTAVIAGYAQN 120

Query: 492 GHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEH 551
           G+G E+L +F++M  +G++       SVL AC+    +  G + F + +   GF      
Sbjct: 121 GYGDESLNVFNQMRKTGMKSDRFIMGSVLSACADLAALELGRQ-FHAYVVQSGFALDIVV 179

Query: 552 YACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFE-- 609
            + +VD+  ++G +E A +    +  +     W +++  C  H   N A +  E++ +  
Sbjct: 180 GSALVDMYAKSGSMEDACQVFDKMP-QRNEVSWNSIITGCAQHGRGNDAVLLFEQMLQAG 238

Query: 610 LDPENVGYHVLLS 622
           + P  + +  +LS
Sbjct: 239 IKPNEISFVGVLS 251



 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 88/356 (24%), Positives = 162/356 (45%), Gaps = 34/356 (9%)

Query: 103 ALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSA 162
            + P+ FT S V+ A ++      G   H + I  G+ SD+ V  ALV +Y +   ++ A
Sbjct: 5   GVKPNQFTLSTVVKACASIASLEQGKQAHNYIIKMGFESDVVVQTALVHMYARCGSLEDA 64

Query: 163 RKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDM---------------------- 200
             VFDKM E+ T  WN+MI+G  +N   + ++ +F +M                      
Sbjct: 65  GHVFDKMSERSTRTWNAMITGHAQNRDMKKALKLFYEMSERDVVSWTAVIAGYAQNGYGD 124

Query: 201 --------VRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLV 252
                   +R  G   D   + +VL A A++  L LG +     ++ GF   + V + LV
Sbjct: 125 ESLNVFNQMRKTGMKSDRFIMGSVLSACADLAALELGRQFHAYVVQSGFALDIVVGSALV 184

Query: 253 SFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSS 312
             Y+K G +E A  +F  + + + +S N++I+G   +G+   ++ LF Q+L +  + N  
Sbjct: 185 DMYAKSGSMEDACQVFDKMPQRNEVSWNSIITGCAQHGRGNDAVLLFEQMLQAGIKPNEI 244

Query: 313 TIVGLIPVFYPFGHLHLTNCIHSFCLKS-GIVSNSSVLTALSTVYSRLNEMEAARKLFDE 371
           + VG++      G ++      +   ++ GIV + S  T +  +  R   ++ A    + 
Sbjct: 245 SFVGVLSACSHTGLVNEGRGYFNLMTQNYGIVPDVSHYTCMIDLLGRAGCLDEAENFING 304

Query: 372 SS-EKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKV--APNPVTVSSILSACAQ 424
              E  ++ W A++     +G TE A  + + +   +V  A   V +S+I +A  Q
Sbjct: 305 MPVEPDVSVWGALLGACRIHGNTELAKRIAEHLLGMEVQIAGIYVLLSNIYAAAGQ 360



 Score =  102 bits (255), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 80/314 (25%), Positives = 138/314 (43%), Gaps = 35/314 (11%)

Query: 24  QLTQTHAQIIIHGFQNDLSTVTKLAH----------------RLSDFKATCY-------- 59
           Q  Q H  II  GF++D+   T L H                ++S+     +        
Sbjct: 28  QGKQAHNYIIKMGFESDVVVQTALVHMYARCGSLEDAGHVFDKMSERSTRTWNAMITGHA 87

Query: 60  -------ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYS 112
                  A  LF+ + + D+  +  +I G++ N     S+  +  +RK T +  D F   
Sbjct: 88  QNRDMKKALKLFYEMSERDVVSWTAVIAGYAQNGYGDESLNVFNQMRK-TGMKSDRFIMG 146

Query: 113 FVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEK 172
            VLSA +      +G   H + + SG+  D+ VG+ALVD+Y K   ++ A +VFDKMP++
Sbjct: 147 SVLSACADLAALELGRQFHAYVVQSGFALDIVVGSALVDMYAKSGSMEDACQVFDKMPQR 206

Query: 173 DTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGME- 231
           + V WNS+I+G  ++    D++ +F  M++  G   +  S   VL A +    +  G   
Sbjct: 207 NEVSWNSIITGCAQHGRGNDAVLLFEQMLQ-AGIKPNEISFVGVLSACSHTGLVNEGRGY 265

Query: 232 IQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDI-VRPDLISCNAMISGYTCNG 290
              +    G    V   T ++    + G ++ AE     + V PD+    A++     +G
Sbjct: 266 FNLMTQNYGIVPDVSHYTCMIDLLGRAGCLDEAENFINGMPVEPDVSVWGALLGACRIHG 325

Query: 291 KTESSLRLFRQLLA 304
            TE + R+   LL 
Sbjct: 326 NTELAKRIAEHLLG 339


>gi|449445401|ref|XP_004140461.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39680-like [Cucumis sativus]
          Length = 697

 Score =  436 bits (1122), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 228/674 (33%), Positives = 377/674 (55%), Gaps = 4/674 (0%)

Query: 114 VLSAASACCDRSIGVLLHGHAIVSGYG---SDLFVGAALVDLYFKFSWVKSARKVFDKMP 170
           +L  A+   +   G  +H H  ++ +    S +    +L++LY K   V  ARK+FD MP
Sbjct: 25  LLKVAADAKNLKFGRTIHAHLTITNHNYRDSKVNQLNSLINLYVKCDEVSIARKLFDSMP 84

Query: 171 EKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGM 230
            ++ V W+++++G M+N    +   +F  MV     + +   +A  + +  + Q    G 
Sbjct: 85  RRNVVSWSALMAGYMQNGNPLEVFELFKKMVVKDNIFPNEYVIATAISS-CDSQMYVEGK 143

Query: 231 EIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNG 290
           +     LK G   H YV   L+  YSKC +V  A  +   +   D+   N +++G   + 
Sbjct: 144 QCHGYALKSGLEFHQYVKNALIQLYSKCSDVGAAIQILYTVPGNDIFCYNLVVNGLLQHT 203

Query: 291 KTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLT 350
               ++ + + +++     N++T V +  +      + L   +H+  LKS I  +  + +
Sbjct: 204 HMAEAVDVLKLIISEGIEWNNATYVTIFRLCASLKDITLGKQVHAQMLKSDIDCDVYIGS 263

Query: 351 ALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAP 410
           ++  +Y +   + + R  FD    +++ SW ++IA Y QN   EEA++LF +M+   + P
Sbjct: 264 SIIDMYGKCGNVLSGRTFFDRLQSRNVVSWTSIIAAYFQNEFFEEALNLFSKMEIDCIPP 323

Query: 411 NPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELF 470
           N  T++ + ++ A L A+ LG  +H   +    + N+ V  ALI MY K G+I+ A+ +F
Sbjct: 324 NEYTMAVLFNSAAGLSALCLGDQLHARAEKSGLKGNVMVGNALIIMYFKSGDILAAQSVF 383

Query: 471 DLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVR 530
             M+  + +TWN +I+G+  HG G EAL +F +M+ +G RP+ VTF+ V+ AC+H  LV 
Sbjct: 384 SNMTCCNIITWNAIITGHSHHGLGKEALSMFQDMMATGERPNYVTFIGVILACAHLKLVD 443

Query: 531 EGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGA 590
           EG   F  ++      P  EHY C+V +L R+G+L++A  F++   +      W  LL A
Sbjct: 444 EGFYYFNHLMKQFRIVPGLEHYTCIVGLLSRSGRLDEAENFMRSHQINWDVVSWRTLLNA 503

Query: 591 CMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAP 650
           C +HK  +  R  +E L +L+P +VG ++LLSN+++  R +     +R+++++R + K P
Sbjct: 504 CYVHKHYDKGRKIAEYLLQLEPRDVGTYILLSNMHARVRRWDHVVEIRKLMRERNVKKEP 563

Query: 651 GCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKE 710
           G + +E+    HVFTS D  HP++  IY  ++ L  K+R  G+  +    LHD+E+E+K 
Sbjct: 564 GVSWLEIRNVAHVFTSEDIKHPEANLIYENVKDLLSKIRPLGYVPDIDNVLHDIEDEQKV 623

Query: 711 LMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRF 770
             +  HSEKLA+A+GL+ T  G  I +IKNLR+C DCHTA K ISKV  RVIVVRDANRF
Sbjct: 624 DNLSYHSEKLAVAYGLMKTPSGAPITVIKNLRMCDDCHTAIKLISKVANRVIVVRDANRF 683

Query: 771 HHFKGGVCSCGDYW 784
           HHF+ G CSCGDYW
Sbjct: 684 HHFQNGCCSCGDYW 697



 Score =  109 bits (272), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 79/332 (23%), Positives = 166/332 (50%), Gaps = 21/332 (6%)

Query: 42  STVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKN 101
           + + +L  + SD  A   A  + +++P  D+F +N+++ G   +     ++     L  +
Sbjct: 162 NALIQLYSKCSDVGA---AIQILYTVPGNDIFCYNLVVNGLLQHTHMAEAVDVLK-LIIS 217

Query: 102 TALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKS 161
             +  +N TY  +    ++  D ++G  +H   + S    D+++G++++D+Y K   V S
Sbjct: 218 EGIEWNNATYVTIFRLCASLKDITLGKQVHAQMLKSDIDCDVYIGSSIIDMYGKCGNVLS 277

Query: 162 ARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVA 221
            R  FD++  ++ V W S+I+   +N  F++++ +F  M  +     +  ++A +  + A
Sbjct: 278 GRTFFDRLQSRNVVSWTSIIAAYFQNEFFEEALNLFSKMEIDCIP-PNEYTMAVLFNSAA 336

Query: 222 EVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNA 281
            +  L LG ++     K G   +V V   L+  Y K G++  A+ +F ++   ++I+ NA
Sbjct: 337 GLSALCLGDQLHARAEKSGLKGNVMVGNALIIMYFKSGDILAAQSVFSNMTCCNIITWNA 396

Query: 282 MISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPV----------FYPFGHLHLTN 331
           +I+G++ +G  + +L +F+ ++A+ ER N  T +G+I            FY F HL    
Sbjct: 397 IITGHSHHGLGKEALSMFQDMMATGERPNYVTFIGVILACAHLKLVDEGFYYFNHL---- 452

Query: 332 CIHSFCLKSGIVSNSSVLTALSTVYSRLNEME 363
            +  F +  G+   + ++  LS    RL+E E
Sbjct: 453 -MKQFRIVPGLEHYTCIVGLLSRS-GRLDEAE 482


>gi|414881621|tpg|DAA58752.1| TPA: hypothetical protein ZEAMMB73_723286 [Zea mays]
          Length = 1058

 Score =  436 bits (1122), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 267/772 (34%), Positives = 423/772 (54%), Gaps = 19/772 (2%)

Query: 25   LTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSN 84
            L Q    ++  G  +DL   + L    +    T  A+ +F S+ + +    N +I G   
Sbjct: 294  LDQVLVWVLKSGCSSDLYVGSALVSAFARHGLTDEAKDIFLSLKQKNAVTLNGLIVGLVR 353

Query: 85   NEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACC----DRSIGVLLHGHAIVSGYG 140
             +  + ++  +   R    +  D  TY  +LSA +          IG ++HGH + +G  
Sbjct: 354  QDFSEEAVKIFVGTRNTVDVNAD--TYVVLLSALAEYSISEEGLRIGRVVHGHMLRTGL- 410

Query: 141  SDLFVGAA--LVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFG 198
            +DL +  +  LV++Y K   ++SA K+F  M   D + WN++IS L +N   ++++  + 
Sbjct: 411  TDLKIAVSNGLVNMYAKCGAIESASKIFQLMEATDRISWNTIISALDQNGNCEEAVMHYS 470

Query: 199  DMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKC 258
             ++R       + ++ + L + A ++ L  G ++ C  +K G      V   LV  Y +C
Sbjct: 471  -LMRQSCISPSNFALISSLSSCAGLKLLTAGQQVHCDAVKWGLDLDTSVSNVLVKMYGEC 529

Query: 259  GEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESS--LRLFRQLLASAERVNSSTIVG 316
            G +     +F  +   D +S N M+ G   + +T  S  +++F  ++      N  T + 
Sbjct: 530  GAMSDYWKVFNSMAEHDEVSWNTMM-GVMASSQTPISEIVKVFNNMMRGGLIPNKVTFIN 588

Query: 317  LIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKS 376
            L+    P   L L   +H+  +K G++ ++ V  AL + Y++  +M +   LF   S++ 
Sbjct: 589  LLAALSPLSVLELGKQVHAAVMKHGVMEDNVVDNALISCYAKSGDMGSCEHLFTNMSDRR 648

Query: 377  LA-SWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVH 435
             A SWN+MI+GY  NG  +EA+     M  S    +  T S IL+ACA + A+  G  +H
Sbjct: 649  DAISWNSMISGYIYNGNLQEAMDCVWLMIHSGQIMDCCTFSIILNACASVAALERGMELH 708

Query: 436  ELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGL 495
                  + ES++ V +AL+DMY+KCG +  A +LF+ M+ ++E +WN+MISGY  HG G 
Sbjct: 709  AFGIRSHLESDVVVESALVDMYSKCGRVDYASKLFNSMTQRNEFSWNSMISGYARHGLGR 768

Query: 496  EALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACM 555
            +A+++F EML S   P  VTF+SVL ACSHAGLV  G E F+ M+ DHG  P  EHY+C+
Sbjct: 769  KAIEIFEEMLRSRESPDHVTFVSVLSACSHAGLVERGLEYFE-MMPDHGILPQIEHYSCV 827

Query: 556  VDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKD---TNLARVASEKLFELDP 612
            +D+LGRAG+++K  E+I+ + +EP   +W  +L AC   KD    +L R AS  L E++P
Sbjct: 828  IDLLGRAGKIDKIKEYIQRMPIEPNALIWRTVLVACRQSKDGSNIDLGREASRVLLEIEP 887

Query: 613  ENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHP 672
            +N   +VL SN ++A   +   A  R  +++    K  G + + +    H F +GD+ HP
Sbjct: 888  QNPVNYVLASNFHAATGMWEDTAKARTAMRQATEKKEAGRSWVTLNDGVHTFIAGDRSHP 947

Query: 673  QSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPG 732
             +  IY  L  L   +R AG+   T  AL+D+EEE KE ++  HSEKLAIAF L  +  G
Sbjct: 948  NTKEIYEKLNFLIQNIRNAGYVPLTEYALYDLEEENKEELLSYHSEKLAIAFVLTRSSSG 1007

Query: 733  TEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
              IRI+KNLRVC DCH A ++IS++  R I++RD+ RFHHFK G CSCGDYW
Sbjct: 1008 P-IRIMKNLRVCGDCHIAFRYISQMISRQIILRDSIRFHHFKDGKCSCGDYW 1058



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 133/482 (27%), Positives = 224/482 (46%), Gaps = 31/482 (6%)

Query: 130 LHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCC 189
           LH   I  G   DLF+   LV+ Y K + + +A +VFD+MPE++ V W  ++SG + +  
Sbjct: 83  LHVELIKRGLNHDLFLCNHLVNSYAKGARLAAASQVFDEMPERNAVSWTCLVSGYVLHGI 142

Query: 190 FQDSIWVFGDMVR--NGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGL--KLGFHDHV 245
            +++  VF  M+R    G    S +   +L A  +    RLG  +Q  GL  K  +  + 
Sbjct: 143 AEEAFRVFRAMLREVQAGCRPTSFTFGTLLRACQDGGPDRLGFAVQVHGLVSKTEYASNT 202

Query: 246 YVLTGLVSFYSKC--GEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLL 303
            V   L+S Y  C  G    A+ +F      DLI+ NA++S Y   G   S+  LF+ + 
Sbjct: 203 TVCNALISMYGSCTVGPPILAQRVFDGTPIRDLITWNALMSVYAKKGDVASTFTLFKDMQ 262

Query: 304 ASAERVNSSTIVGLIPVFYPFGHL-----------HLTNCIHSFCLKSGIVSNSSVLTAL 352
               R+       L P  + FG L            + + +  + LKSG  S+  V +AL
Sbjct: 263 RGDSRIQ------LRPTEHTFGSLITAASLSSGSSAVLDQVLVWVLKSGCSSDLYVGSAL 316

Query: 353 STVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNP 412
            + ++R    + A+ +F    +K+  + N +I G  +   +EEA+ +F   + + V  N 
Sbjct: 317 VSAFARHGLTDEAKDIFLSLKQKNAVTLNGLIVGLVRQDFSEEAVKIFVGTR-NTVDVNA 375

Query: 413 VTVSSILSACAQLG----AISLGKWVH-ELVKSRNFESNIYVSTALIDMYAKCGNIVEAR 467
            T   +LSA A+       + +G+ VH  ++++   +  I VS  L++MYAKCG I  A 
Sbjct: 376 DTYVVLLSALAEYSISEEGLRIGRVVHGHMLRTGLTDLKIAVSNGLVNMYAKCGAIESAS 435

Query: 468 ELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAG 527
           ++F LM     ++WNT+IS    +G+  EA+  +S M  S I PS    +S L +C+   
Sbjct: 436 KIFQLMEATDRISWNTIISALDQNGNCEEAVMHYSLMRQSCISPSNFALISSLSSCAGLK 495

Query: 528 LVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGAL 587
           L+  G ++    +   G          +V + G  G +    +    +A E     W  +
Sbjct: 496 LLTAGQQVHCDAV-KWGLDLDTSVSNVLVKMYGECGAMSDYWKVFNSMA-EHDEVSWNTM 553

Query: 588 LG 589
           +G
Sbjct: 554 MG 555



 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 64/215 (29%), Positives = 101/215 (46%), Gaps = 11/215 (5%)

Query: 317 LIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKS 376
           L+P+    G  +    +H   +K G+  +  +   L   Y++   + AA ++FDE  E++
Sbjct: 67  LLPLLRRGGDANSPENLHVELIKRGLNHDLFLCNHLVNSYAKGARLAAASQVFDEMPERN 126

Query: 377 LASWNAMIAGYTQNGLTEEAISLFQEMQASKVA---PNPVTVSSILSACAQLGAISLG-- 431
             SW  +++GY  +G+ EEA  +F+ M     A   P   T  ++L AC   G   LG  
Sbjct: 127 AVSWTCLVSGYVLHGIAEEAFRVFRAMLREVQAGCRPTSFTFGTLLRACQDGGPDRLGFA 186

Query: 432 KWVHELVKSRNFESNIYVSTALIDMYAKC--GNIVEARELFDLMSHKSEVTWNTMISGYG 489
             VH LV    + SN  V  ALI MY  C  G  + A+ +FD    +  +TWN ++S Y 
Sbjct: 187 VQVHGLVSKTEYASNTTVCNALISMYGSCTVGPPILAQRVFDGTPIRDLITWNALMSVYA 246

Query: 490 LHGHGLEALQLFSEMLHSG----IRPSGVTFLSVL 520
             G       LF +M        +RP+  TF S++
Sbjct: 247 KKGDVASTFTLFKDMQRGDSRIQLRPTEHTFGSLI 281


>gi|302795736|ref|XP_002979631.1| hypothetical protein SELMODRAFT_110838 [Selaginella moellendorffii]
 gi|300152879|gb|EFJ19520.1| hypothetical protein SELMODRAFT_110838 [Selaginella moellendorffii]
          Length = 879

 Score =  436 bits (1121), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 272/795 (34%), Positives = 434/795 (54%), Gaps = 26/795 (3%)

Query: 5   TPQSRNLFLSLLKGAKTQSQLTQTHAQI--IIHG--FQNDLSTVTKLAHRLSDFKATCYA 60
            P +RN F+++L       +L +   +I  ++ G   ++D    T L H      +   A
Sbjct: 96  APVNRN-FVAVLGACSADPELLEEGRRIHGVLRGTAMESDHYVSTTLLHMYGKCSSVEDA 154

Query: 61  RALFFSIPKPDLFLFNVIIRGFSNNEMPKSSI-CFYTHLRKNTALTPDNFTYSFVLSAAS 119
           R +F  I    +  +N +I  ++  +  + +I  FY  L +   +  +  T+  VL A S
Sbjct: 155 RKVFDGIRHKRVVEWNAMITAYAQQDHHEQAIQVFYAMLLE--GVKAERITFIGVLDACS 212

Query: 120 ACCDRSIGVLL--------HGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPE 171
              D  +  L+        H H   S + +      ALV+ Y     ++ A + F +   
Sbjct: 213 KLKDLEVAKLVKLCVEEREHDHLHDSSFAT------ALVNFYGSCGDLEQAFRAFSRH-R 265

Query: 172 KDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGME 231
            + +L  +MI+   +   + +++ +F  M+  G   LD  +  AVL A +  + L  G  
Sbjct: 266 LELILATAMITQYTQRERWDEALELFKVMLLEG-VKLDRIACMAVLNACSGPRGLEEGRM 324

Query: 232 IQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGK 291
           I     ++ F  HV     L++ Y KCG +E A  +FR +   D+IS N +I+ +  + +
Sbjct: 325 IHGFMREIRFDRHVNAGNALINMYGKCGSLEEAVEVFRSMQHRDVISWNTIIAAHGQHSQ 384

Query: 292 TESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTA 351
              +L L   +     + +  + V  +P+      L     IHS+ ++SGI ++  +  A
Sbjct: 385 HPEALHLLHLMQLDGVKADKISFVNALPLCAASEALAKGRMIHSWIVESGIKADVMLDNA 444

Query: 352 LSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYT-QNGLTEEAISLFQEMQASKVAP 410
           +  +Y      + A ++F     +   SWNAMI  Y  Q  L+ EA+ LFQ+MQ     P
Sbjct: 445 ILDMYGSCKSTDDASRVFRAMKARDQVSWNAMITAYAAQPRLSSEALLLFQQMQLHGFMP 504

Query: 411 NPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELF 470
           + ++  + LSACA   +++ GK +H+ ++    ESN+ V+ A+++MYAK G++V AR++F
Sbjct: 505 DVISFVAALSACAAQASLAEGKLLHDRIRETGLESNMTVANAVLNMYAKSGSLVLARKMF 564

Query: 471 DLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVR 530
             M     ++WN MIS +  HGH  + L+ F  M H G  P+ VTF+SV+ ACSH GLV+
Sbjct: 565 GKMPLPDVISWNGMISAFAQHGHADQVLRFFRRMNHEGKLPNDVTFVSVVSACSHGGLVK 624

Query: 531 EGDEIFQSMIHDH-GFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLG 589
           +G ++F S++HD     P AEHY CMVD++ RAG+L+ A +FI    ++P   +   +LG
Sbjct: 625 DGVQLFVSLLHDFPTISPRAEHYYCMVDLIARAGKLDAAEKFIAAAPLKPDRVIHSTMLG 684

Query: 590 ACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKA 649
           A  +HKD   AR ++E L EL P+    +V+LSN+Y       + A +R+++ ++ + K 
Sbjct: 685 ASKVHKDVERARKSAEHLMELTPDRSAAYVVLSNLYDEVGKKDEGAKIRRLMYEKNIRKE 744

Query: 650 PGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEK 709
           P  + I V    H F +GD  + ++  I   LE+L+ +M +AG+  +T   LHDV +E+K
Sbjct: 745 PAFSSIAVKRRVHEFFTGDTTNARTPEILEELERLSLEMAKAGYTPDTTLMLHDVGDEQK 804

Query: 710 ELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANR 769
           + ++  HSEKLAIAFGLI+T PGT +RIIKNLRVC DCHTATKFISK+TGR IVVRD++R
Sbjct: 805 KRLLSYHSEKLAIAFGLISTAPGTSLRIIKNLRVCGDCHTATKFISKITGREIVVRDSHR 864

Query: 770 FHHFKGGVCSCGDYW 784
           FHHF  G CSCGDYW
Sbjct: 865 FHHFDNGTCSCGDYW 879



 Score =  166 bits (419), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 121/484 (25%), Positives = 217/484 (44%), Gaps = 9/484 (1%)

Query: 111 YSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMP 170
           Y+ +L   +      +G  +H     S      F+G  LV +Y     +  A+  FD+MP
Sbjct: 1   YADLLDVVADSRSLDLGKEVHARICKSAMDRGPFMGDLLVRMYVDCGSLIDAKACFDRMP 60

Query: 171 EKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGM 230
            +D + W  +I    +    + ++ +F  M   G   ++   VA +    A+ + L  G 
Sbjct: 61  VQDALTWARLIRAHGQIGDSEQALHLFRSMQLEGVAPVNRNFVAVLGACSADPELLEEGR 120

Query: 231 EIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNG 290
            I  +          YV T L+  Y KC  VE A  +F  I    ++  NAMI+ Y    
Sbjct: 121 RIHGVLRGTAMESDHYVSTTLLHMYGKCSSVEDARKVFDGIRHKRVVEWNAMITAYAQQD 180

Query: 291 KTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKS---GIVSNSS 347
             E ++++F  +L    +    T +G++        L +   +   C++      + +SS
Sbjct: 181 HHEQAIQVFYAMLLEGVKAERITFIGVLDACSKLKDLEVAKLV-KLCVEEREHDHLHDSS 239

Query: 348 VLTALSTVYSRLNEMEAARKLFDESS-EKSLASWNAMIAGYTQNGLTEEAISLFQEMQAS 406
             TAL   Y    ++E A + F     E  LA+  AMI  YTQ    +EA+ LF+ M   
Sbjct: 240 FATALVNFYGSCGDLEQAFRAFSRHRLELILAT--AMITQYTQRERWDEALELFKVMLLE 297

Query: 407 KVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEA 466
            V  + +   ++L+AC+    +  G+ +H  ++   F+ ++    ALI+MY KCG++ EA
Sbjct: 298 GVKLDRIACMAVLNACSGPRGLEEGRMIHGFMREIRFDRHVNAGNALINMYGKCGSLEEA 357

Query: 467 RELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHA 526
            E+F  M H+  ++WNT+I+ +G H    EAL L   M   G++   ++F++ L  C+ +
Sbjct: 358 VEVFRSMQHRDVISWNTIIAAHGQHSQHPEALHLLHLMQLDGVKADKISFVNALPLCAAS 417

Query: 527 GLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGA 586
             + +G  +  S I + G K        ++D+ G     + A    + +      + W A
Sbjct: 418 EALAKG-RMIHSWIVESGIKADVMLDNAILDMYGSCKSTDDASRVFRAMKARDQVS-WNA 475

Query: 587 LLGA 590
           ++ A
Sbjct: 476 MITA 479


>gi|224096249|ref|XP_002310592.1| predicted protein [Populus trichocarpa]
 gi|222853495|gb|EEE91042.1| predicted protein [Populus trichocarpa]
          Length = 747

 Score =  436 bits (1121), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 240/698 (34%), Positives = 380/698 (54%), Gaps = 67/698 (9%)

Query: 153 YFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTS 212
           Y K   ++ A +VFD +P +D+V W ++I G  +   F+D+I +F DMV++        +
Sbjct: 51  YAKQGKLEKAHQVFDLIPVRDSVSWTTIIVGYNQMGRFEDAIKIFVDMVKDK-VLPTQFT 109

Query: 213 VAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSK--------------- 257
           +  VL + A      +G ++    +KLG H  V V   L++ Y+K               
Sbjct: 110 LTNVLASCAATGSRGIGKKVHSFVVKLGLHACVPVANSLLNMYAKTGDLKMAKVVFDRMK 169

Query: 258 ----------------CGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQ 301
                           CG V+ A   F  +   D++S N+MI+G   +G    +L+ F  
Sbjct: 170 LRNTSSWNAMISLHMNCGRVDLALAQFELLSERDIVSWNSMIAGCNQHGFDNEALQFFSS 229

Query: 302 LLASAE-RVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLK-----SGIVSNSSV------- 348
           +L     + +  ++   +        L     IH + ++     SG V N+ +       
Sbjct: 230 ILKDTSLKPDRFSLASALSACANLEKLSFGKQIHGYIVRTMFDASGAVGNALISMYAKSG 289

Query: 349 ---------------------LTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGY 387
                                 TAL   Y +L ++  AR++F+   +  + +W AMI GY
Sbjct: 290 GVEIARRIIEQSGISDLDVIAFTALLNGYVKLGDITPARQIFNSLKDPDVVAWTAMIVGY 349

Query: 388 TQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNI 447
            QNGL  +AI +F+ M +    PN  T++++LSA + + +++ GK +H          + 
Sbjct: 350 VQNGLNNDAIEVFKTMVSEGPRPNSFTLAAMLSASSSVTSLNHGKQIHASAIRSGEALSP 409

Query: 448 YVSTALIDMYAKCGNIVEARELFDLM-SHKSEVTWNTMISGYGLHGHGLEALQLFSEMLH 506
            V  AL  MYAK G+I  AR++F+L+  ++  V+W +MI     HG G EA++LF +ML 
Sbjct: 410 SVGNALTTMYAKAGSINGARKVFNLLRQNRDTVSWTSMIMALAQHGLGEEAIELFEQMLT 469

Query: 507 SGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLE 566
            GI+P  +T++ VL AC+H GLV +G   F  M + H   P   HYACMVD+ GRAG L+
Sbjct: 470 LGIKPDHITYVGVLSACTHGGLVEQGRSYFDLMKNVHKIDPTLSHYACMVDLFGRAGLLQ 529

Query: 567 KALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYS 626
           +A +F++ + +EP    WG+LL +C ++K+ +LA+VA+E+L  ++P N G +  L+N+YS
Sbjct: 530 EAYKFVENMPMEPDVIAWGSLLSSCKVYKNVDLAKVAAERLLLIEPNNSGAYSALANVYS 589

Query: 627 AERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNG 686
           +   +  AA +R+++K R + K  G + +++    HVF   D LHPQ   IY M++K+  
Sbjct: 590 SCGKWDDAAKIRKLMKARGVKKEQGLSWVQIQNKTHVFGVEDGLHPQKDEIYKMMDKIWK 649

Query: 687 KMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLD 746
           ++++ GF  +T + LHD+E E K+ +++ HSEKLAIAFG+I+T   T +RI+KNLRVC D
Sbjct: 650 EIKKMGFAPDTESVLHDLEVEVKDQILRYHSEKLAIAFGIISTPENTTLRIMKNLRVCND 709

Query: 747 CHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           CH A KFISK+  R I+VRDA RFHHFK G CSC DYW
Sbjct: 710 CHNAIKFISKLVDREIIVRDATRFHHFKDGSCSCKDYW 747



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 123/494 (24%), Positives = 224/494 (45%), Gaps = 68/494 (13%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           A  +F  IP  D   +  II G++     + +I  +  + K+  L P  FT + VL++ +
Sbjct: 60  AHQVFDLIPVRDSVSWTTIIVGYNQMGRFEDAIKIFVDMVKDKVL-PTQFTLTNVLASCA 118

Query: 120 ACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMP--------- 170
           A   R IG  +H   +  G  + + V  +L+++Y K   +K A+ VFD+M          
Sbjct: 119 ATGSRGIGKKVHSFVVKLGLHACVPVANSLLNMYAKTGDLKMAKVVFDRMKLRNTSSWNA 178

Query: 171 ----------------------EKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWL 208
                                 E+D V WNSMI+G  ++    +++  F  ++++     
Sbjct: 179 MISLHMNCGRVDLALAQFELLSERDIVSWNSMIAGCNQHGFDNEALQFFSSILKDTSLKP 238

Query: 209 DSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVE------ 262
           D  S+A+ L A A +++L  G +I    ++  F     V   L+S Y+K G VE      
Sbjct: 239 DRFSLASALSACANLEKLSFGKQIHGYIVRTMFDASGAVGNALISMYAKSGGVEIARRII 298

Query: 263 ---------------------------RAELLFRDIVRPDLISCNAMISGYTCNGKTESS 295
                                       A  +F  +  PD+++  AMI GY  NG    +
Sbjct: 299 EQSGISDLDVIAFTALLNGYVKLGDITPARQIFNSLKDPDVVAWTAMIVGYVQNGLNNDA 358

Query: 296 LRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTV 355
           + +F+ +++   R NS T+  ++        L+    IH+  ++SG   + SV  AL+T+
Sbjct: 359 IEVFKTMVSEGPRPNSFTLAAMLSASSSVTSLNHGKQIHASAIRSGEALSPSVGNALTTM 418

Query: 356 YSRLNEMEAARKLFD-ESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVT 414
           Y++   +  ARK+F+     +   SW +MI    Q+GL EEAI LF++M    + P+ +T
Sbjct: 419 YAKAGSINGARKVFNLLRQNRDTVSWTSMIMALAQHGLGEEAIELFEQMLTLGIKPDHIT 478

Query: 415 VSSILSACAQLGAISLGKWVHELVKS-RNFESNIYVSTALIDMYAKCGNIVEARELFDLM 473
              +LSAC   G +  G+   +L+K+    +  +     ++D++ + G + EA +  + M
Sbjct: 479 YVGVLSACTHGGLVEQGRSYFDLMKNVHKIDPTLSHYACMVDLFGRAGLLQEAYKFVENM 538

Query: 474 SHKSEV-TWNTMIS 486
             + +V  W +++S
Sbjct: 539 PMEPDVIAWGSLLS 552



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 108/444 (24%), Positives = 190/444 (42%), Gaps = 78/444 (17%)

Query: 251 LVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVN 310
           ++S Y+K G++E+A  +F  I   D +S   +I GY   G+ E ++++F  ++       
Sbjct: 47  ILSGYAKQGKLEKAHQVFDLIPVRDSVSWTTIIVGYNQMGRFEDAIKIFVDMVKDKVLPT 106

Query: 311 SSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFD 370
             T+  ++      G   +   +HSF +K G+ +   V  +L  +Y++  +++ A+ +FD
Sbjct: 107 QFTLTNVLASCAATGSRGIGKKVHSFVVKLGLHACVPVANSLLNMYAKTGDLKMAKVVFD 166

Query: 371 ES-------------------------------SEKSLASWNAMIAGYTQNGLTEEAISL 399
                                            SE+ + SWN+MIAG  Q+G   EA+  
Sbjct: 167 RMKLRNTSSWNAMISLHMNCGRVDLALAQFELLSERDIVSWNSMIAGCNQHGFDNEALQF 226

Query: 400 FQE-MQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYA 458
           F   ++ + + P+  +++S LSACA L  +S GK +H  +    F+++  V  ALI MYA
Sbjct: 227 FSSILKDTSLKPDRFSLASALSACANLEKLSFGKQIHGYIVRTMFDASGAVGNALISMYA 286

Query: 459 KCG---------------------------------NIVEARELFDLMSHKSEVTWNTMI 485
           K G                                 +I  AR++F+ +     V W  MI
Sbjct: 287 KSGGVEIARRIIEQSGISDLDVIAFTALLNGYVKLGDITPARQIFNSLKDPDVVAWTAMI 346

Query: 486 SGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHD-HG 544
            GY  +G   +A+++F  M+  G RP+  T  ++L A S    +  G +I  S I     
Sbjct: 347 VGYVQNGLNNDAIEVFKTMVSEGPRPNSFTLAAMLSASSSVTSLNHGKQIHASAIRSGEA 406

Query: 545 FKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVAS 604
             P   +   +  +  +AG +  A +    L        W +++ A   H    L   A 
Sbjct: 407 LSPSVGN--ALTTMYAKAGSINGARKVFNLLRQNRDTVSWTSMIMALAQH---GLGEEAI 461

Query: 605 EKLFE------LDPENVGYHVLLS 622
           E LFE      + P+++ Y  +LS
Sbjct: 462 E-LFEQMLTLGIKPDHITYVGVLS 484



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 115/455 (25%), Positives = 203/455 (44%), Gaps = 77/455 (16%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           A A F  + + D+  +N +I G + +     ++ F++ + K+T+L PD F+ +  LSA +
Sbjct: 192 ALAQFELLSERDIVSWNSMIAGCNQHGFDNEALQFFSSILKDTSLKPDRFSLASALSACA 251

Query: 120 ACCDRSIGVLLHGH--------------AIVSGYG-----------------SDLFVGA- 147
                S G  +HG+              A++S Y                  SDL V A 
Sbjct: 252 NLEKLSFGKQIHGYIVRTMFDASGAVGNALISMYAKSGGVEIARRIIEQSGISDLDVIAF 311

Query: 148 -ALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGT 206
            AL++ Y K   +  AR++F+ + + D V W +MI G ++N    D+I VF  MV  G  
Sbjct: 312 TALLNGYVKLGDITPARQIFNSLKDPDVVAWTAMIVGYVQNGLNNDAIEVFKTMVSEGPR 371

Query: 207 WLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAEL 266
             +S ++AA+L A + V  L  G +I    ++ G      V   L + Y+K G +  A  
Sbjct: 372 -PNSFTLAAMLSASSSVTSLNHGKQIHASAIRSGEALSPSVGNALTTMYAKAGSINGARK 430

Query: 267 LFRDIVRP--DLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPF 324
           +F +++R   D +S  +MI     +G  E ++ LF Q+L    + +  T VG+       
Sbjct: 431 VF-NLLRQNRDTVSWTSMIMALAQHGLGEEAIELFEQMLTLGIKPDHITYVGV------- 482

Query: 325 GHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMI 384
               L+ C H   ++ G               S  + M+   K+     + +L+ +  M+
Sbjct: 483 ----LSACTHGGLVEQG--------------RSYFDLMKNVHKI-----DPTLSHYACMV 519

Query: 385 AGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHE---LVKSR 441
             + + GL +EA    + M    + P+ +   S+LS+C     + L K   E   L++  
Sbjct: 520 DLFGRAGLLQEAYKFVENM---PMEPDVIAWGSLLSSCKVYKNVDLAKVAAERLLLIEPN 576

Query: 442 NFESNIYVSTALIDMYAKCGNIVEARELFDLMSHK 476
           N  S  Y  +AL ++Y+ CG   +A ++  LM  +
Sbjct: 577 N--SGAY--SALANVYSSCGKWDDAAKIRKLMKAR 607



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 43/168 (25%), Positives = 83/168 (49%), Gaps = 14/168 (8%)

Query: 446 NIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEML 505
           ++Y+   L+++YAK G  ++A +LF+ M  K+  +WNT++SGY   G   +A Q+F  + 
Sbjct: 9   SVYLMNNLMNLYAKTGFHLDAHDLFNEMPVKTTFSWNTILSGYAKQGKLEKAHQVFDLI- 67

Query: 506 HSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDIL------ 559
              +R S V++ +++   +  G   +  +IF  M+ D   K L   +  + ++L      
Sbjct: 68  --PVRDS-VSWTTIIVGYNQMGRFEDAIKIFVDMVKD---KVLPTQFT-LTNVLASCAAT 120

Query: 560 GRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKL 607
           G  G  +K   F+  L +     V  +LL       D  +A+V  +++
Sbjct: 121 GSRGIGKKVHSFVVKLGLHACVPVANSLLNMYAKTGDLKMAKVVFDRM 168


>gi|222637368|gb|EEE67500.1| hypothetical protein OsJ_24934 [Oryza sativa Japonica Group]
          Length = 830

 Score =  436 bits (1121), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 241/695 (34%), Positives = 371/695 (53%), Gaps = 73/695 (10%)

Query: 159 VKSARKVFDKMP--EKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAV 216
           ++ A   FD +P   +DTVL N+M+S   +      ++ VF  ++ +G    D  S  A+
Sbjct: 108 LRDAAAFFDAVPPARRDTVLHNAMMSAFARASLAAPAVSVFHALLGSGSLRPDDYSFTAL 167

Query: 217 LPAVAEVQELRLG--MEIQCLGLKLGFHDHVYVLTGLVSFYSKC---------------- 258
           + AV ++  L      ++ C  LK G    + V   L++ Y KC                
Sbjct: 168 ISAVGQMHNLAAPHCTQLHCSVLKSGAAAVLSVSNALIALYMKCDTPEASWDARKVLDEM 227

Query: 259 ------------------GEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFR 300
                             G+V  A  +F ++     +  NAMISGY  +G    +  LFR
Sbjct: 228 PDKDDLTWTTMVVGYVRRGDVNAARSVFEEVDGKFDVVWNAMISGYVQSGMCADAFELFR 287

Query: 301 QLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHS--FCLKSGIVSNSS--VLTALSTVY 356
           ++++    ++  T   ++      G       +H     L+   V  ++  V  AL T+Y
Sbjct: 288 RMVSEKVPLDEFTFTSVLSACANAGFFVHGKSVHGQIIRLQPNFVPEAALPVNNALVTLY 347

Query: 357 SRLNEMEAARKLFDESSEKSLASWNA-------------------------------MIA 385
           S+  ++  A+++FD  + K + SWN                                M++
Sbjct: 348 SKGGKIVIAKRIFDTMNLKDVVSWNTILSGYIDSGCLDKAVEVFKVMPYKNDLSWMVMVS 407

Query: 386 GYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFES 445
           GY   GL+E+A+ LF +M+A  V P   T +  ++AC +LGA+  G+ +H  +    FE+
Sbjct: 408 GYVHGGLSEDALKLFNQMRAEDVKPCDYTYAGAIAACGELGALKHGRQLHAHLVQCGFEA 467

Query: 446 NIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEML 505
           +     AL+ MYAKCG + +AR +F +M +   V+WN MIS  G HGHG EAL+LF +M+
Sbjct: 468 SNSAGNALLTMYAKCGAVNDARLVFLVMPNLDSVSWNAMISALGQHGHGREALELFDQMV 527

Query: 506 HSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQL 565
             GI P  ++FL++L AC+HAGLV EG   F+SM  D G  P  +HYA ++D+LGR+G++
Sbjct: 528 AEGIDPDRISFLTILTACNHAGLVDEGFHYFESMKRDFGISPGEDHYARLIDLLGRSGRI 587

Query: 566 EKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIY 625
            +A + IK +  EP P++W A+L  C  + D      A+++LF + P++ G ++LLSN Y
Sbjct: 588 GEARDLIKTMPFEPTPSIWEAILSGCRTNGDMEFGAYAADQLFRMIPQHDGTYILLSNTY 647

Query: 626 SAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLN 685
           SA   ++ AA VR++++ R + K PGC+ IEVG   HVF  GD  HP++  +Y  LE + 
Sbjct: 648 SAAGRWVDAARVRKLMRDRGVKKEPGCSWIEVGSKIHVFLVGDTKHPEAQEVYQFLEVIG 707

Query: 686 GKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCL 745
            +MR+ G+  +T   LHD+E  EKE ++  HSEKLA+ FGL+   PG  + ++KNLR+C 
Sbjct: 708 ARMRKLGYVPDTKFVLHDMEPHEKEYILFAHSEKLAVGFGLLKLPPGATVTVLKNLRICG 767

Query: 746 DCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSC 780
           DCHTA  F+SK  GR IVVRD  RFHHFK G CSC
Sbjct: 768 DCHTAMMFMSKAVGREIVVRDVRRFHHFKDGECSC 802



 Score =  142 bits (358), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 141/530 (26%), Positives = 227/530 (42%), Gaps = 102/530 (19%)

Query: 48  AHRLSDFKATCYARALFFSIP--KPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALT 105
           A RL D      A A F ++P  + D  L N ++  F+   +   ++  +  L  + +L 
Sbjct: 105 AGRLRD------AAAFFDAVPPARRDTVLHNAMMSAFARASLAAPAVSVFHALLGSGSLR 158

Query: 106 PDNFTYSFVLSA-------ASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFK--- 155
           PD+++++ ++SA       A+  C +     LH   + SG  + L V  AL+ LY K   
Sbjct: 159 PDDYSFTALISAVGQMHNLAAPHCTQ-----LHCSVLKSGAAAVLSVSNALIALYMKCDT 213

Query: 156 --FSWVKSARKVFDKMPEKDT-------------------------------VLWNSMIS 182
              SW   ARKV D+MP+KD                                V+WN+MIS
Sbjct: 214 PEASW--DARKVLDEMPDKDDLTWTTMVVGYVRRGDVNAARSVFEEVDGKFDVVWNAMIS 271

Query: 183 GLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEI--QCLGLKLG 240
           G +++    D+  +F  MV      LD  +  +VL A A       G  +  Q + L+  
Sbjct: 272 GYVQSGMCADAFELFRRMVSEK-VPLDEFTFTSVLSACANAGFFVHGKSVHGQIIRLQPN 330

Query: 241 F--HDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNA----------------- 281
           F     + V   LV+ YSK G++  A+ +F  +   D++S N                  
Sbjct: 331 FVPEAALPVNNALVTLYSKGGKIVIAKRIFDTMNLKDVVSWNTILSGYIDSGCLDKAVEV 390

Query: 282 --------------MISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHL 327
                         M+SGY   G +E +L+LF Q+ A   +    T  G I      G L
Sbjct: 391 FKVMPYKNDLSWMVMVSGYVHGGLSEDALKLFNQMRAEDVKPCDYTYAGAIAACGELGAL 450

Query: 328 HLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGY 387
                +H+  ++ G  +++S   AL T+Y++   +  AR +F         SWNAMI+  
Sbjct: 451 KHGRQLHAHLVQCGFEASNSAGNALLTMYAKCGAVNDARLVFLVMPNLDSVSWNAMISAL 510

Query: 388 TQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNF---- 443
            Q+G   EA+ LF +M A  + P+ ++  +IL+AC   G +  G    E +K R+F    
Sbjct: 511 GQHGHGREALELFDQMVAEGIDPDRISFLTILTACNHAGLVDEGFHYFESMK-RDFGISP 569

Query: 444 ESNIYVSTALIDMYAKCGNIVEARELFDLMS-HKSEVTWNTMISGYGLHG 492
             + Y    LID+  + G I EAR+L   M    +   W  ++SG   +G
Sbjct: 570 GEDHYAR--LIDLLGRSGRIGEARDLIKTMPFEPTPSIWEAILSGCRTNG 617



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 102/361 (28%), Positives = 167/361 (46%), Gaps = 48/361 (13%)

Query: 249 TGLVSFYSKCGEVERAELLFRDI--VRPDLISCNAMISGYTCNGKTESSLRLFRQLLASA 306
           T LV+  +  G +  A   F  +   R D +  NAM+S +        ++ +F  LL S 
Sbjct: 96  TSLVAAQAAAGRLRDAAAFFDAVPPARRDTVLHNAMMSAFARASLAAPAVSVFHALLGSG 155

Query: 307 E-RVNSSTIVGLIPVFYPFGHLHLTNC--IHSFCLKSGIVSNSSVLTALSTVYSRLNEME 363
             R +  +   LI       +L   +C  +H   LKSG  +  SV  AL  +Y + +  E
Sbjct: 156 SLRPDDYSFTALISAVGQMHNLAAPHCTQLHCSVLKSGAAAVLSVSNALIALYMKCDTPE 215

Query: 364 A---ARKLFDESSEKSLASWNAMI-------------------------------AGYTQ 389
           A   ARK+ DE  +K   +W  M+                               +GY Q
Sbjct: 216 ASWDARKVLDEMPDKDDLTWTTMVVGYVRRGDVNAARSVFEEVDGKFDVVWNAMISGYVQ 275

Query: 390 NGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVH-ELVK-SRNF--ES 445
           +G+  +A  LF+ M + KV  +  T +S+LSACA  G    GK VH ++++   NF  E+
Sbjct: 276 SGMCADAFELFRRMVSEKVPLDEFTFTSVLSACANAGFFVHGKSVHGQIIRLQPNFVPEA 335

Query: 446 NIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEML 505
            + V+ AL+ +Y+K G IV A+ +FD M+ K  V+WNT++SGY   G   +A+++F  M 
Sbjct: 336 ALPVNNALVTLYSKGGKIVIAKRIFDTMNLKDVVSWNTILSGYIDSGCLDKAVEVFKVMP 395

Query: 506 HSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQL 565
           +     + ++++ ++    H GL  +  ++F  M      KP    YA  +   G  G L
Sbjct: 396 YK----NDLSWMVMVSGYVHGGLSEDALKLFNQM-RAEDVKPCDYTYAGAIAACGELGAL 450

Query: 566 E 566
           +
Sbjct: 451 K 451



 Score = 65.9 bits (159), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 63/254 (24%), Positives = 112/254 (44%), Gaps = 24/254 (9%)

Query: 63  LFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACC 122
           +F  +P  +   + V++ G+ +  + + ++  +  +R    + P ++TY+  ++A     
Sbjct: 390 VFKVMPYKNDLSWMVMVSGYVHGGLSEDALKLFNQMRAED-VKPCDYTYAGAIAACGELG 448

Query: 123 DRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMIS 182
               G  LH H +  G+ +    G AL+ +Y K   V  AR VF  MP  D+V WN+MIS
Sbjct: 449 ALKHGRQLHAHLVQCGFEASNSAGNALLTMYAKCGAVNDARLVFLVMPNLDSVSWNAMIS 508

Query: 183 GLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEI-----QCLGL 237
            L ++   ++++ +F  MV   G   D  S   +L A      +  G        +  G+
Sbjct: 509 ALGQHGHGREALELFDQMVAE-GIDPDRISFLTILTACNHAGLVDEGFHYFESMKRDFGI 567

Query: 238 KLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVR-----PDLISCNAMISGYTCNGKT 292
             G  DH   L  L+    + GE        RD+++     P      A++SG   NG  
Sbjct: 568 SPG-EDHYARLIDLLGRSGRIGEA-------RDLIKTMPFEPTPSIWEAILSGCRTNGDM 619

Query: 293 E----SSLRLFRQL 302
           E    ++ +LFR +
Sbjct: 620 EFGAYAADQLFRMI 633


>gi|302791503|ref|XP_002977518.1| hypothetical protein SELMODRAFT_107192 [Selaginella moellendorffii]
 gi|300154888|gb|EFJ21522.1| hypothetical protein SELMODRAFT_107192 [Selaginella moellendorffii]
          Length = 652

 Score =  436 bits (1121), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 240/679 (35%), Positives = 369/679 (54%), Gaps = 84/679 (12%)

Query: 142 DLFVGAALVDLYFKFSWVKSARKVFDKMP------------------------------- 170
           D F    ++ +Y +   + +A+ VFD+MP                               
Sbjct: 22  DSFSWGIMLSIYARSGDLSNAKGVFDRMPRWSLGSWTALLSAFALSGHHEEAKTLFDTMQ 81

Query: 171 EKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGM 230
           E+D + W  M++ L      +D+ + F  M        D  +  A+L A AE    R  M
Sbjct: 82  ERDLIAWTIMLTVLATFSNIEDAKYHFDQMPER-----DLVAWTAMLAANAE----RGQM 132

Query: 231 EIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNG 290
           E            +++  T L+S Y + G+V+ A  +F  +   +L++  AM++GY+ +G
Sbjct: 133 ENARETFDQMPERNLFSWTSLLSAYGRSGDVKAAGRVFDSMPEWNLVAWTAMLTGYSLSG 192

Query: 291 KTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLT 350
               + R F  +    ER        LI                               T
Sbjct: 193 DVVRAKRAFDSM---PER-------DLI-----------------------------AWT 213

Query: 351 ALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQ-----A 405
           A+ + Y+    +   R++F    E+ L SW  M+A   +N L EE+  LF  M      +
Sbjct: 214 AMLSAYAFNGHLRYTREIFQRMPERDLISWATMVAALVENDLLEESKELFDRMPRHCALS 273

Query: 406 SKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVE 465
             + PN VT  ++L AC+ LGA++ G+ +H  V  R F++++ VS AL++ Y +CG + +
Sbjct: 274 KGMTPNRVTFITLLDACSFLGALAEGRKIHAAVAERGFDTDLVVSNALVNFYGRCGALGD 333

Query: 466 ARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSH 525
           A+ +FD M  +  ++W++MIS +   G   EA++L+  ML  G  P  + F+SVL+ACS+
Sbjct: 334 AKIVFDGMRRRDVISWSSMISAFAQRGRVDEAMELYHRMLSEGTLPDDIIFISVLFACSN 393

Query: 526 AGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWG 585
           +G+V    + F+S++ D   +P  EHYACMVD+LGRAG+L  A + ++ +   PGP ++ 
Sbjct: 394 SGVVEASGDFFRSIVGDTQVEPTLEHYACMVDVLGRAGKLRDAEDLLRLMPFHPGPLLYM 453

Query: 586 ALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRK 645
            +L AC ++ D      A+E +FELDPEN   ++ L+NIYSA +    AA +R+++++R 
Sbjct: 454 TMLSACKLYTDVERGEAAAEVVFELDPENSSPYITLANIYSAAKRPKDAARIRKLMEERG 513

Query: 646 LAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVE 705
           + K PGC+ IEV    H F +GD++HPQ   IYA +++L  +M+EAG+  +T   L DVE
Sbjct: 514 IKKKPGCSWIEVLDRVHEFIAGDKMHPQRDEIYAEIQRLGRQMKEAGYFQDTKVVLQDVE 573

Query: 706 EEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVR 765
           E+EKE ++  HSEKLAIAFGLI+T PG  +RI+KNLRVC DCH ATK ISKVTGR I+VR
Sbjct: 574 EDEKENLLWYHSEKLAIAFGLISTPPGAPLRIVKNLRVCSDCHAATKVISKVTGREILVR 633

Query: 766 DANRFHHFKGGVCSCGDYW 784
           D NRFHHF+ G+CSC DYW
Sbjct: 634 DTNRFHHFQNGMCSCNDYW 652



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/150 (26%), Positives = 73/150 (48%), Gaps = 4/150 (2%)

Query: 59  YARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTAL----TPDNFTYSFV 114
           Y R +F  +P+ DL  +  ++     N++ + S   +  + ++ AL    TP+  T+  +
Sbjct: 227 YTREIFQRMPERDLISWATMVAALVENDLLEESKELFDRMPRHCALSKGMTPNRVTFITL 286

Query: 115 LSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDT 174
           L A S     + G  +H      G+ +DL V  ALV+ Y +   +  A+ VFD M  +D 
Sbjct: 287 LDACSFLGALAEGRKIHAAVAERGFDTDLVVSNALVNFYGRCGALGDAKIVFDGMRRRDV 346

Query: 175 VLWNSMISGLMKNCCFQDSIWVFGDMVRNG 204
           + W+SMIS   +     +++ ++  M+  G
Sbjct: 347 ISWSSMISAFAQRGRVDEAMELYHRMLSEG 376


>gi|224141479|ref|XP_002324099.1| predicted protein [Populus trichocarpa]
 gi|222867101|gb|EEF04232.1| predicted protein [Populus trichocarpa]
          Length = 676

 Score =  436 bits (1120), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 214/535 (40%), Positives = 325/535 (60%), Gaps = 1/535 (0%)

Query: 251 LVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAE-RV 309
           L+S Y+K G ++ A+ LF  +   D  S  AMISGY  + +   +L LFR +  S   + 
Sbjct: 142 LISGYAKMGLLQEAKSLFDKMPERDNFSWTAMISGYVRHDRPNEALELFRMMKRSDNSKS 201

Query: 310 NSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLF 369
           N  T+   +        L +   IH + +++G+ S+  V +ALS +Y +   +E AR +F
Sbjct: 202 NKFTVSSALAAAAAVPCLRIGKEIHGYIMRTGLDSDEVVWSALSDMYGKCGSIEEARHIF 261

Query: 370 DESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAIS 429
           D+  ++ + +W AMI  Y Q+G  +E   LF ++  S + PN  T S +L+ACA   +  
Sbjct: 262 DKMVDRDIVTWTAMIDRYFQDGRRKEGFDLFADLLRSGIRPNEFTFSGVLNACANQTSEE 321

Query: 430 LGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYG 489
           LGK VH  +    F+   + ++AL+ MY+KCGN+V A  +F         +W ++I+GY 
Sbjct: 322 LGKKVHGYMTRVGFDPFSFAASALVHMYSKCGNMVSAERVFKETPQPDLFSWTSLIAGYA 381

Query: 490 LHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLA 549
            +G   EA++ F  ++ SG +P  +TF+ VL AC+HAGLV +G + F S+   +G    A
Sbjct: 382 QNGQPDEAIRYFELLVKSGTQPDHITFVGVLSACAHAGLVDKGLDYFHSIKEQYGLTHTA 441

Query: 550 EHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFE 609
           +HYAC++D+L R+GQ ++A   I  ++++P   +W +LLG C IH +  LA+ A+E LFE
Sbjct: 442 DHYACIIDLLARSGQFDEAENIISKMSMKPDKFLWASLLGGCRIHGNLKLAQRAAEALFE 501

Query: 610 LDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQ 669
           ++PEN   +V L+NIY+    + + A +R+ +  R + K PG + I +    HVF  GD 
Sbjct: 502 IEPENPATYVTLANIYATAGMWSEVAKIRKTMDDRGVVKKPGLSWIAIKRDVHVFLVGDD 561

Query: 670 LHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIAT 729
            HP+S  I   L KL+ +M+E GF  +T   LHDVE+E+KE  +  HSEKLA+AFG+I+T
Sbjct: 562 SHPKSKEINEFLGKLSKRMKEEGFVPDTNFVLHDVEDEQKEQNLSYHSEKLAVAFGIIST 621

Query: 730 EPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
             GT I++ KNLR C+DCHTA KFISK+T R I+VRD+NRFH F+ G CSC DYW
Sbjct: 622 PEGTPIKVFKNLRTCVDCHTAIKFISKITNRKIIVRDSNRFHFFEDGHCSCRDYW 676



 Score =  176 bits (446), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 129/483 (26%), Positives = 226/483 (46%), Gaps = 10/483 (2%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           A  +   I KP   +++ +I+    + + +     + H+ K +   P  F  + +L   +
Sbjct: 58  ALQILHQIDKPSASVYSTLIQSCIKSRLLQQGKKVHQHI-KLSGFVPGLFILNRLLEMYA 116

Query: 120 ACCDRSIGVLLHGHAIVSGYGS-DLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWN 178
            C       L+    +       DL     L+  Y K   ++ A+ +FDKMPE+D   W 
Sbjct: 117 KC-----DSLMDSQKLFDEMPERDLCSWNILISGYAKMGLLQEAKSLFDKMPERDNFSWT 171

Query: 179 SMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLK 238
           +MISG +++    +++ +F  M R+  +  +  +V++ L A A V  LR+G EI    ++
Sbjct: 172 AMISGYVRHDRPNEALELFRMMKRSDNSKSNKFTVSSALAAAAAVPCLRIGKEIHGYIMR 231

Query: 239 LGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRL 298
            G      V + L   Y KCG +E A  +F  +V  D+++  AMI  Y  +G+ +    L
Sbjct: 232 TGLDSDEVVWSALSDMYGKCGSIEEARHIFDKMVDRDIVTWTAMIDRYFQDGRRKEGFDL 291

Query: 299 FRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSR 358
           F  LL S  R N  T  G++          L   +H +  + G    S   +AL  +YS+
Sbjct: 292 FADLLRSGIRPNEFTFSGVLNACANQTSEELGKKVHGYMTRVGFDPFSFAASALVHMYSK 351

Query: 359 LNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSI 418
              M +A ++F E+ +  L SW ++IAGY QNG  +EAI  F+ +  S   P+ +T   +
Sbjct: 352 CGNMVSAERVFKETPQPDLFSWTSLIAGYAQNGQPDEAIRYFELLVKSGTQPDHITFVGV 411

Query: 419 LSACAQLGAISLG-KWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKS 477
           LSACA  G +  G  + H + +             +ID+ A+ G   EA  +   MS K 
Sbjct: 412 LSACAHAGLVDKGLDYFHSIKEQYGLTHTADHYACIIDLLARSGQFDEAENIISKMSMKP 471

Query: 478 E-VTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIF 536
           +   W +++ G  +HG+ L+  Q  +E L      +  T++++    + AG+  E  +I 
Sbjct: 472 DKFLWASLLGGCRIHGN-LKLAQRAAEALFEIEPENPATYVTLANIYATAGMWSEVAKIR 530

Query: 537 QSM 539
           ++M
Sbjct: 531 KTM 533



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 45/164 (27%), Positives = 72/164 (43%), Gaps = 13/164 (7%)

Query: 27  QTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNE 86
           + H  +   GF       + L H  S       A  +F   P+PDLF +  +I G++ N 
Sbjct: 325 KVHGYMTRVGFDPFSFAASALVHMYSKCGNMVSAERVFKETPQPDLFSWTSLIAGYAQNG 384

Query: 87  MPKSSICFYTHLRKNTALTPDNFTYSFVLSAA--SACCDRSIGVLLHGHAIVSGYG---- 140
            P  +I ++  L K +   PD+ T+  VLSA   +   D+ +      H+I   YG    
Sbjct: 385 QPDEAIRYFELLVK-SGTQPDHITFVGVLSACAHAGLVDKGLDYF---HSIKEQYGLTHT 440

Query: 141 SDLFVGAALVDLYFKFSWVKSARKVFDKMPEK-DTVLWNSMISG 183
           +D +  A ++DL  +      A  +  KM  K D  LW S++ G
Sbjct: 441 ADHY--ACIIDLLARSGQFDEAENIISKMSMKPDKFLWASLLGG 482


>gi|15226299|ref|NP_178260.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75216969|sp|Q9ZVF4.1|PP140_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At2g01510, mitochondrial; Flags: Precursor
 gi|3785980|gb|AAC67327.1| hypothetical protein [Arabidopsis thaliana]
 gi|330250369|gb|AEC05463.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 584

 Score =  436 bits (1120), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 227/556 (40%), Positives = 325/556 (58%), Gaps = 2/556 (0%)

Query: 231 EIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNG 290
           +I  + L+ GF +   +LT L+      G++  A  +F ++ +P +   N +  GY  N 
Sbjct: 29  KIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYVRNQ 88

Query: 291 KTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLT 350
               SL L++++     R +  T   ++      G       +H+  +K G      V T
Sbjct: 89  LPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLGIVAT 148

Query: 351 ALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAP 410
            L  +Y +  E+ +A  LF+    K L +WNA +A   Q G +  A+  F +M A  V  
Sbjct: 149 ELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQF 208

Query: 411 NPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELF 470
           +  TV S+LSAC QLG++ +G+ +++  +    + NI V  A +DM+ KCGN   AR LF
Sbjct: 209 DSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVLF 268

Query: 471 DLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVR 530
           + M  ++ V+W+TMI GY ++G   EAL LF+ M + G+RP+ VTFL VL ACSHAGLV 
Sbjct: 269 EEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLVN 328

Query: 531 EGDEIFQSMI--HDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALL 588
           EG   F  M+  +D   +P  EHYACMVD+LGR+G LE+A EFIK + VEP   +WGALL
Sbjct: 329 EGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTGIWGALL 388

Query: 589 GACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAK 648
           GAC +H+D  L +  ++ L E  P+   YHVLLSNIY+A   +     VR  ++K    K
Sbjct: 389 GACAVHRDMILGQKVADVLVETAPDIGSYHVLLSNIYAAAGKWDCVDKVRSKMRKLGTKK 448

Query: 649 APGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEE 708
               + +E  G  H F  GD+ HPQS AIY  L+++  K+R+ G+  +T +  HDVE EE
Sbjct: 449 VAAYSSVEFEGKIHFFNRGDKSHPQSKAIYEKLDEILKKIRKMGYVPDTCSVFHDVEMEE 508

Query: 709 KELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDAN 768
           KE  +  HSEKLAIAFGLI   PG  IR++KNLR C DCH  +KF+S +T   I++RD N
Sbjct: 509 KECSLSHHSEKLAIAFGLIKGRPGHPIRVMKNLRTCDDCHAFSKFVSSLTSTEIIMRDKN 568

Query: 769 RFHHFKGGVCSCGDYW 784
           RFHHF+ GVCSC ++W
Sbjct: 569 RFHHFRNGVCSCKEFW 584



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 122/443 (27%), Positives = 210/443 (47%), Gaps = 42/443 (9%)

Query: 1   MSMKTPQSRNLFLSLLKGAKTQ-SQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCY 59
           ++ +TP ++ +   LL+ + ++  QL + HA ++  GF    S +T+L   L      CY
Sbjct: 2   LAKQTPLTKQMLSELLRASSSKPKQLKKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCY 61

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           AR +F  + KP +FL+N + +G+  N++P  S+  Y  +R +  + PD FTY FV+ A S
Sbjct: 62  ARQVFDEMHKPRIFLWNTLFKGYVRNQLPFESLLLYKKMR-DLGVRPDEFTYPFVVKAIS 120

Query: 120 ACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNS 179
              D S G  LH H +  G+G    V   LV +Y KF  + SA  +F+ M  KD V WN+
Sbjct: 121 QLGDFSCGFALHAHVVKYGFGCLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNA 180

Query: 180 MISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKL 239
            ++  ++      ++  F  M  +     DS +V ++L A  ++  L +G EI     K 
Sbjct: 181 FLAVCVQTGNSAIALEYFNKMCAD-AVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKE 239

Query: 240 GFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLF 299
               ++ V    +  + KCG  E A +LF ++ + +++S + MI GY  NG +  +L LF
Sbjct: 240 EIDCNIIVENARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLF 299

Query: 300 RQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRL 359
             +     R N  T +G++                S C  +G+V                
Sbjct: 300 TTMQNEGLRPNYVTFLGVL----------------SACSHAGLV---------------- 327

Query: 360 NEMEAARKLFDESSEKSLAS----WNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTV 415
           NE +    L  +S++K+L      +  M+    ++GL EEA    ++M    V P+    
Sbjct: 328 NEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKM---PVEPDTGIW 384

Query: 416 SSILSACAQLGAISLGKWVHELV 438
            ++L ACA    + LG+ V +++
Sbjct: 385 GALLGACAVHRDMILGQKVADVL 407



 Score =  149 bits (376), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 97/334 (29%), Positives = 164/334 (49%), Gaps = 5/334 (1%)

Query: 162 ARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVA 221
           AR+VFD+M +    LWN++  G ++N    +S+ ++  M R+ G   D  +   V+ A++
Sbjct: 62  ARQVFDEMHKPRIFLWNTLFKGYVRNQLPFESLLLYKKM-RDLGVRPDEFTYPFVVKAIS 120

Query: 222 EVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNA 281
           ++ +   G  +    +K GF     V T LV  Y K GE+  AE LF  +   DL++ NA
Sbjct: 121 QLGDFSCGFALHAHVVKYGFGCLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNA 180

Query: 282 MISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSG 341
            ++     G +  +L  F ++ A A + +S T+V ++      G L +   I+    K  
Sbjct: 181 FLAVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEE 240

Query: 342 IVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQ 401
           I  N  V  A   ++ +    EAAR LF+E  ++++ SW+ MI GY  NG + EA++LF 
Sbjct: 241 IDCNIIVENARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFT 300

Query: 402 EMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELV---KSRNFESNIYVSTALIDMYA 458
            MQ   + PN VT   +LSAC+  G ++ GK    L+     +N E        ++D+  
Sbjct: 301 TMQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLG 360

Query: 459 KCGNIVEARELFDLMSHKSEV-TWNTMISGYGLH 491
           + G + EA E    M  + +   W  ++    +H
Sbjct: 361 RSGLLEEAYEFIKKMPVEPDTGIWGALLGACAVH 394



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 44/169 (26%), Positives = 76/169 (44%), Gaps = 2/169 (1%)

Query: 432 KWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLH 491
           K +H +V    F     + T L++     G++  AR++FD M       WNT+  GY  +
Sbjct: 28  KKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYVRN 87

Query: 492 GHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEH 551
               E+L L+ +M   G+RP   T+  V+ A S  G    G  +   ++  +GF  L   
Sbjct: 88  QLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVV-KYGFGCLGIV 146

Query: 552 YACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLA 600
              +V +  + G+L  A    + + V+   A W A L  C+   ++ +A
Sbjct: 147 ATELVMMYMKFGELSSAEFLFESMQVKDLVA-WNAFLAVCVQTGNSAIA 194


>gi|297804786|ref|XP_002870277.1| hypothetical protein ARALYDRAFT_493409 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297316113|gb|EFH46536.1| hypothetical protein ARALYDRAFT_493409 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 684

 Score =  436 bits (1120), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 246/643 (38%), Positives = 359/643 (55%), Gaps = 3/643 (0%)

Query: 144 FVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRN 203
           F+   L+++Y K    +SAR V    P ++ V W S++SGL +N  F  +++ F +M R 
Sbjct: 43  FLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLVSGLAQNGHFSTALFEFFEMRRE 102

Query: 204 GGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVER 263
           G    D T    V  AVA ++    G +I  L +K G    V+V       Y K    + 
Sbjct: 103 GVAPNDFT-FPCVFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDD 161

Query: 264 AELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYP 323
           A  LF +I   +L + NA IS    +G+ + ++  F +      + NS T  G +     
Sbjct: 162 ARKLFDEIPERNLETWNAYISNSVTDGRPKEAIEAFIEFRRIGGQPNSITFCGFLNACSD 221

Query: 324 FGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAM 383
              L L   +H    +SG  ++ SV   L   Y +  ++ ++  +F E   K+  SW ++
Sbjct: 222 GLLLDLGMQMHGLVFRSGFDTDVSVYNGLIDFYGKCKQIRSSEIIFAEMGMKNAVSWCSL 281

Query: 384 IAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNF 443
           +A Y QN   E+A  L+   +   V  +   +SS+LSACA +  + LG+ +H        
Sbjct: 282 VAAYVQNHEDEKASVLYLRSRKEIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACV 341

Query: 444 ESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSE 503
           E NI+V +AL+DMY KCG I ++ + FD M  K+ VT N++I GY   G    AL LF +
Sbjct: 342 ERNIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTLNSLIGGYAHQGQVDMALALFED 401

Query: 504 MLHSGIRPSG--VTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGR 561
           M   G  P+   +TF+S+L ACS AG V  G +IF SM   +G +P AEHY+C+VD+LGR
Sbjct: 402 MAPRGCGPAPNYMTFVSLLSACSRAGAVENGMKIFDSMKSTYGIEPGAEHYSCIVDMLGR 461

Query: 562 AGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLL 621
           AG +E+A EFIK + ++P  +VWGAL  AC +H   +L  +A+E LF+LDP++ G HVLL
Sbjct: 462 AGMVEQAFEFIKKMPIKPTISVWGALQNACRMHGKPHLGILAAENLFKLDPKDSGNHVLL 521

Query: 622 SNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAML 681
           SN ++A   + +A TVR+ +K   + K  G + I V    H F + D+ H  +  I  ML
Sbjct: 522 SNTFAAAGRWAEANTVREEMKGVGIKKGAGYSWITVKNQVHAFQAKDRSHKMNKEIQTML 581

Query: 682 EKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNL 741
            KL  KM  AG++ +   +L+D+EEEEK   +  HSEKLA+AFGL+A      IRI KNL
Sbjct: 582 TKLRNKMEAAGYKPDLKLSLYDLEEEEKAAEVSHHSEKLALAFGLVALPLSVPIRITKNL 641

Query: 742 RVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           R+C DCH+  KF+S    R I+VRD NRFH FK G+CSC DYW
Sbjct: 642 RICGDCHSFFKFVSGSVKREIIVRDNNRFHRFKDGICSCKDYW 684



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 119/439 (27%), Positives = 222/439 (50%), Gaps = 10/439 (2%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           AR +    P  ++  +  ++ G + N    +++  +  +R+   + P++FT+  V  A +
Sbjct: 61  ARLVLRLTPARNVVSWTSLVSGLAQNGHFSTALFEFFEMRRE-GVAPNDFTFPCVFKAVA 119

Query: 120 ACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNS 179
           +      G  +H  A+  G   D+FVG +  D+Y K      ARK+FD++PE++   WN+
Sbjct: 120 SLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNA 179

Query: 180 MISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKL 239
            IS  + +   +++I  F +  R GG   +S +    L A ++   L LGM++  L  + 
Sbjct: 180 YISNSVTDGRPKEAIEAFIEFRRIGGQ-PNSITFCGFLNACSDGLLLDLGMQMHGLVFRS 238

Query: 240 GFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLF 299
           GF   V V  GL+ FY KC ++  +E++F ++   + +S  ++++ Y  N + E +  L+
Sbjct: 239 GFDTDVSVYNGLIDFYGKCKQIRSSEIIFAEMGMKNAVSWCSLVAAYVQNHEDEKASVLY 298

Query: 300 RQLLASAERVNSST--IVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYS 357
             L +  E V +S   I  ++        L L   IH+  +K+ +  N  V +AL  +Y 
Sbjct: 299 --LRSRKEIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERNIFVGSALVDMYG 356

Query: 358 RLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEM--QASKVAPNPVTV 415
           +   +E + + FDE  EK+L + N++I GY   G  + A++LF++M  +    APN +T 
Sbjct: 357 KCGCIEDSEQAFDEMPEKNLVTLNSLIGGYAHQGQVDMALALFEDMAPRGCGPAPNYMTF 416

Query: 416 SSILSACAQLGAISLGKWVHELVKSR-NFESNIYVSTALIDMYAKCGNIVEARELFDLMS 474
            S+LSAC++ GA+  G  + + +KS    E      + ++DM  + G + +A E    M 
Sbjct: 417 VSLLSACSRAGAVENGMKIFDSMKSTYGIEPGAEHYSCIVDMLGRAGMVEQAFEFIKKMP 476

Query: 475 HKSEVT-WNTMISGYGLHG 492
            K  ++ W  + +   +HG
Sbjct: 477 IKPTISVWGALQNACRMHG 495



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 66/268 (24%), Positives = 117/268 (43%), Gaps = 4/268 (1%)

Query: 27  QTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNE 86
           Q H  +   GF  D+S    L       K    +  +F  +   +   +  ++  +  N 
Sbjct: 230 QMHGLVFRSGFDTDVSVYNGLIDFYGKCKQIRSSEIIFAEMGMKNAVSWCSLVAAYVQNH 289

Query: 87  MPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVG 146
             + +   Y   RK    T D F  S VLSA +      +G  +H HA+ +    ++FVG
Sbjct: 290 EDEKASVLYLRSRKEIVETSD-FMISSVLSACAGMAGLELGRSIHAHAVKACVERNIFVG 348

Query: 147 AALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNG-G 205
           +ALVD+Y K   ++ + + FD+MPEK+ V  NS+I G         ++ +F DM   G G
Sbjct: 349 SALVDMYGKCGCIEDSEQAFDEMPEKNLVTLNSLIGGYAHQGQVDMALALFEDMAPRGCG 408

Query: 206 TWLDSTSVAAVLPAVAEVQELRLGMEI-QCLGLKLGFHDHVYVLTGLVSFYSKCGEVERA 264
              +  +  ++L A +    +  GM+I   +    G        + +V    + G VE+A
Sbjct: 409 PAPNYMTFVSLLSACSRAGAVENGMKIFDSMKSTYGIEPGAEHYSCIVDMLGRAGMVEQA 468

Query: 265 -ELLFRDIVRPDLISCNAMISGYTCNGK 291
            E + +  ++P +    A+ +    +GK
Sbjct: 469 FEFIKKMPIKPTISVWGALQNACRMHGK 496



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 34/110 (30%), Positives = 58/110 (52%), Gaps = 1/110 (0%)

Query: 427 AISLGKWVH-ELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMI 485
           ++ LG+ VH  +VK+ +     +++  LI+MY+K  +   AR +  L   ++ V+W +++
Sbjct: 21  SMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLV 80

Query: 486 SGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEI 535
           SG   +GH   AL  F EM   G+ P+  TF  V  A +   L   G +I
Sbjct: 81  SGLAQNGHFSTALFEFFEMRREGVAPNDFTFPCVFKAVASLRLPVTGKQI 130


>gi|357454909|ref|XP_003597735.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|87240430|gb|ABD32288.1| Tetratricopeptide-like helical [Medicago truncatula]
 gi|355486783|gb|AES67986.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 620

 Score =  436 bits (1120), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 223/570 (39%), Positives = 339/570 (59%), Gaps = 1/570 (0%)

Query: 215 AVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRP 274
           ++L +  + + L  G ++      LG   +  + T LV  Y+    +  A  LF  I + 
Sbjct: 52  SLLQSCIDSKALNPGKQLHAQFYHLGIAYNQDLATKLVHLYAVSNSLLNARNLFDKIPKQ 111

Query: 275 DLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIH 334
           +L   N +I GY  NG  ++++ L+ ++L    R ++ T+  ++        +     IH
Sbjct: 112 NLFLWNVLIRGYAWNGPHDNAIILYHKMLDYGLRPDNFTLPFVLKACSALSAIGEGRSIH 171

Query: 335 SFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTE 394
            + +KSG   +  V  AL  +Y++   +  A ++FD+   +    WN+M+A Y QNG  +
Sbjct: 172 EYVIKSGWERDLFVGAALIDMYAKCGCVMDAGRVFDKIVVRDAVLWNSMLAAYAQNGHPD 231

Query: 395 EAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALI 454
           E+ISL +EM A+ V P   T+ +++S+ A +  +  G+ +H       F+SN  V TALI
Sbjct: 232 ESISLCREMAANGVRPTEATLVTVISSSADVACLPYGREIHGFGWRHGFQSNDKVKTALI 291

Query: 455 DMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGV 514
           DMYAKCG++  A  LF+ +  K  V+WN +I+GY +HG  + AL LF +M     RP  +
Sbjct: 292 DMYAKCGSVKVALALFERLREKRVVSWNAIITGYAMHGLAVGALDLFDKMRKED-RPDHI 350

Query: 515 TFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKG 574
           TF+ VL ACS   L+ EG  ++  M+ D+G  P  +HY CM+D+LG  GQL++A + I+ 
Sbjct: 351 TFVGVLAACSRGRLLDEGRALYNLMVRDYGITPTVQHYTCMIDLLGHCGQLDEAYDLIRN 410

Query: 575 LAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQA 634
           ++V+P   VWGALL +C IH +  LA +A EKL EL+P++ G +V+L+N+Y+    +   
Sbjct: 411 MSVKPDSGVWGALLNSCKIHGNVELAELALEKLIELEPDDSGNYVILANMYAQSGKWEGV 470

Query: 635 ATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQ 694
             +RQV+  +++ K   C+ IEV    + F +GD  H  S AIYA L++L G M EAG+ 
Sbjct: 471 EKLRQVMIDKRIKKNIACSWIEVKNKVYAFLAGDVSHSNSDAIYAELKRLEGLMHEAGYA 530

Query: 695 TETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFI 754
            +T +  HDVEE+EK  M+  HSE+LAIAFGLI+T PGT + I KNLR+C DCH A KFI
Sbjct: 531 PDTGSVFHDVEEDEKTSMVCSHSERLAIAFGLISTSPGTRLLITKNLRICEDCHVAIKFI 590

Query: 755 SKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           SK+  R I VRD NR+H FK G+CSCGD+W
Sbjct: 591 SKIMEREITVRDVNRYHSFKHGMCSCGDHW 620



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 151/475 (31%), Positives = 223/475 (46%), Gaps = 42/475 (8%)

Query: 6   PQSRNLFLSLLKG---AKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARA 62
           P +   + SLL+    +K  +   Q HAQ    G   +    TKL H  +   +   AR 
Sbjct: 44  PTTHYGYTSLLQSCIDSKALNPGKQLHAQFYHLGIAYNQDLATKLVHLYAVSNSLLNARN 103

Query: 63  LFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACC 122
           LF  IPK +LFL+NV+IRG++ N    ++I  Y H   +  L PDNFT  FVL A SA  
Sbjct: 104 LFDKIPKQNLFLWNVLIRGYAWNGPHDNAIILY-HKMLDYGLRPDNFTLPFVLKACSALS 162

Query: 123 DRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMIS 182
               G  +H + I SG+  DLFVGAAL+D+Y K   V  A +VFDK+  +D VLWNSM++
Sbjct: 163 AIGEGRSIHEYVIKSGWERDLFVGAALIDMYAKCGCVMDAGRVFDKIVVRDAVLWNSMLA 222

Query: 183 GLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFH 242
              +N    +SI +  +M  NG    ++T V  V+ + A+V  L  G EI   G + GF 
Sbjct: 223 AYAQNGHPDESISLCREMAANGVRPTEATLV-TVISSSADVACLPYGREIHGFGWRHGFQ 281

Query: 243 DHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQL 302
            +  V T L+  Y+KCG V+ A  LF  +    ++S NA+I+GY  +G    +L LF + 
Sbjct: 282 SNDKVKTALIDMYAKCGSVKVALALFERLREKRVVSWNAIITGYAMHGLAVGALDLFDK- 340

Query: 303 LASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEM 362
           +   +R +  T VG+           L  C     L  G         AL  +  R    
Sbjct: 341 MRKEDRPDHITFVGV-----------LAACSRGRLLDEG--------RALYNLMVR---- 377

Query: 363 EAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSAC 422
                  D     ++  +  MI      G  +EA  L + M    V P+     ++L++C
Sbjct: 378 -------DYGITPTVQHYTCMIDLLGHCGQLDEAYDLIRNMS---VKPDSGVWGALLNSC 427

Query: 423 AQLGAISLGKWVHE-LVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHK 476
              G + L +   E L++    +S  YV   L +MYA+ G      +L  +M  K
Sbjct: 428 KIHGNVELAELALEKLIELEPDDSGNYV--ILANMYAQSGKWEGVEKLRQVMIDK 480



 Score = 79.0 bits (193), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 53/198 (26%), Positives = 92/198 (46%), Gaps = 5/198 (2%)

Query: 396 AISLFQEMQASKVAPNPVT---VSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTA 452
           +++  Q        P P T    +S+L +C    A++ GK +H          N  ++T 
Sbjct: 28  SLATHQTASVDSFPPQPTTHYGYTSLLQSCIDSKALNPGKQLHAQFYHLGIAYNQDLATK 87

Query: 453 LIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPS 512
           L+ +YA   +++ AR LFD +  ++   WN +I GY  +G    A+ L+ +ML  G+RP 
Sbjct: 88  LVHLYAVSNSLLNARNLFDKIPKQNLFLWNVLIRGYAWNGPHDNAIILYHKMLDYGLRPD 147

Query: 513 GVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFI 572
             T   VL ACS    + EG  I + +I   G++      A ++D+  + G +  A    
Sbjct: 148 NFTLPFVLKACSALSAIGEGRSIHEYVIKS-GWERDLFVGAALIDMYAKCGCVMDAGRVF 206

Query: 573 KGLAVEPGPAVWGALLGA 590
             + V     +W ++L A
Sbjct: 207 DKIVVRDA-VLWNSMLAA 223


>gi|357486999|ref|XP_003613787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355515122|gb|AES96745.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 586

 Score =  436 bits (1120), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 216/577 (37%), Positives = 342/577 (59%), Gaps = 28/577 (4%)

Query: 215 AVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKC---GEVERAELLFRDI 271
           +++P    ++EL+   +IQ   +K  + ++  V+T  ++F +       +E A  LF  I
Sbjct: 31  SLIPKCTTLKELK---QIQAYTIKTNYQNNTNVITKFINFCTSNPTKASMEHAHQLFDQI 87

Query: 272 VRPDLISCNAMISGYTCNGKTESSLRL---FRQLLASAERVNSSTIVGLIPVFYPFGHLH 328
            +P+++  N M  GY    +    LR+   FR+ L    +V +               L 
Sbjct: 88  TQPNIVLFNTMARGY---ARLNDPLRMITHFRRCLRLVSKVKA---------------LA 129

Query: 329 LTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYT 388
               +H F +K G+  N  V+  L  +Y+   +++A+R++FD+  E  + ++NA+I    
Sbjct: 130 EGKQLHCFAVKLGVSDNMYVVPTLINMYTACGDIDASRRVFDKIDEPCVVAYNAIIMSLA 189

Query: 389 QNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIY 448
           +N    EA++LF+E+Q   + P  VT+  +LS+CA LG++ LG+W+HE VK   F+  + 
Sbjct: 190 RNNRANEALALFRELQEIGLKPTDVTMLVVLSSCALLGSLDLGRWMHEYVKKYGFDRYVK 249

Query: 449 VSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSG 508
           V+T LIDMYAKCG++ +A  +F  M  +    W+ +I  Y  HG G +A+ + +EM    
Sbjct: 250 VNTTLIDMYAKCGSLDDAVNVFRDMPKRDTQAWSAIIVAYATHGDGFQAISMLNEMKKEK 309

Query: 509 IRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKA 568
           ++P  +TFL +LYACSH GLV EG E F  M +++G  P  +HY CMVD+LGRAG+L++A
Sbjct: 310 VQPDEITFLGILYACSHNGLVEEGFEYFHGMTNEYGIVPSIKHYGCMVDLLGRAGRLDEA 369

Query: 569 LEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAE 628
            +FI  L ++P P +W  LL AC  H +  + +   E++FELD  + G +V+ SN+ +  
Sbjct: 370 YKFIDELPIKPTPILWRTLLSACSTHGNVEMGKRVIERIFELDDSHGGDYVIFSNLCARY 429

Query: 629 RDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKM 688
             +     +R+ +  +   K PGC+ IEV    H F +G+ +H  ST ++  L++L  ++
Sbjct: 430 GKWDDVNHLRKTMIDKGAVKIPGCSSIEVNNVVHEFFAGEGVHSTSTTLHRALDELVKEL 489

Query: 689 REAGFQTETVTALH-DVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDC 747
           + AG+  +T    + D+E+EEKE++++ HSEKLAI FGL+ T PGT IR++KNLRVC DC
Sbjct: 490 KSAGYVPDTSLVFYADMEDEEKEIILRYHSEKLAITFGLLNTPPGTTIRVVKNLRVCGDC 549

Query: 748 HTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           H A KFIS + GR I++RD  RFHHFK G CSCGDYW
Sbjct: 550 HNAAKFISLIFGRQIILRDVQRFHHFKDGKCSCGDYW 586



 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 105/430 (24%), Positives = 190/430 (44%), Gaps = 53/430 (12%)

Query: 12  FLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSD--FKATC-YARALFFSIP 68
            +SL+    T  +L Q  A  I   +QN+ + +TK  +  +    KA+  +A  LF  I 
Sbjct: 29  LISLIPKCTTLKELKQIQAYTIKTNYQNNTNVITKFINFCTSNPTKASMEHAHQLFDQIT 88

Query: 69  KPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGV 128
           +P++ LFN + RG++    P   I   TH R+   L          +S   A  +   G 
Sbjct: 89  QPNIVLFNTMARGYARLNDPLRMI---THFRRCLRL----------VSKVKALAE---GK 132

Query: 129 LLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNC 188
            LH  A+  G   +++V   L+++Y     + ++R+VFDK+ E   V +N++I  L +N 
Sbjct: 133 QLHCFAVKLGVSDNMYVVPTLINMYTACGDIDASRRVFDKIDEPCVVAYNAIIMSLARNN 192

Query: 189 CFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVL 248
              +++ +F ++   G    D T +  VL + A +  L LG  +     K GF  +V V 
Sbjct: 193 RANEALALFRELQEIGLKPTDVTMLV-VLSSCALLGSLDLGRWMHEYVKKYGFDRYVKVN 251

Query: 249 TGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAER 308
           T L+  Y+KCG ++ A  +FRD+ + D  + +A+I  Y  +G    ++ +  ++     +
Sbjct: 252 TTLIDMYAKCGSLDDAVNVFRDMPKRDTQAWSAIIVAYATHGDGFQAISMLNEMKKEKVQ 311

Query: 309 VNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKL 368
            +  T +G+           L  C H+  ++ G              +   NE       
Sbjct: 312 PDEITFLGI-----------LYACSHNGLVEEG----------FEYFHGMTNEYGIV--- 347

Query: 369 FDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAI 428
                  S+  +  M+    + G  +EA     E+    + P P+   ++LSAC+  G +
Sbjct: 348 ------PSIKHYGCMVDLLGRAGRLDEAYKFIDEL---PIKPTPILWRTLLSACSTHGNV 398

Query: 429 SLGKWVHELV 438
            +GK V E +
Sbjct: 399 EMGKRVIERI 408


>gi|108706064|gb|ABF93859.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|125584837|gb|EAZ25501.1| hypothetical protein OsJ_09324 [Oryza sativa Japonica Group]
          Length = 781

 Score =  436 bits (1120), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 246/725 (33%), Positives = 397/725 (54%), Gaps = 15/725 (2%)

Query: 66  SIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDR- 124
           ++  PD FL NV+IRGF++  +P  ++  Y  + ++ A  PD FT+  V+     CC R 
Sbjct: 66  AVRGPDAFLHNVMIRGFADAGLPAGALAAYRGMLEDGA-RPDRFTFPVVVK----CCARL 120

Query: 125 ---SIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMI 181
                G   HG  I  G   D++   +LV  Y K   V+ A +VFD MP +D V WN+M+
Sbjct: 121 GGLDEGRAAHGMVIKLGLEHDVYTCNSLVAFYAKLGLVEDAERVFDGMPVRDIVTWNTMV 180

Query: 182 SGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVA-EVQELRLGMEIQCLGLKLG 240
            G + N     ++  F +M        DS  + A L A   EV  ++ G EI    ++ G
Sbjct: 181 DGYVSNGLGSLALACFQEMHDALEVQHDSVGIIAALAACCLEVSSMQ-GKEIHGYVIRHG 239

Query: 241 FHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFR 300
               + V T L+  Y KCGEV  A  +F  +    +++ N MI GY  N + + +   F 
Sbjct: 240 LEQDIKVGTSLLDMYCKCGEVAYARSVFATMPLRTVVTWNCMIGGYALNERPDEAFDCFM 299

Query: 301 QLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLN 360
           Q+ A   +V   T + L+              +H + ++   + +  + TAL  +Y ++ 
Sbjct: 300 QMRAEGLQVEVVTAINLLAACAQTESSLYGRSVHGYVVRRQFLPHVVLETALLEMYGKVG 359

Query: 361 EMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILS 420
           ++E++ K+F + + K+L SWN MIA Y    +  EAI+LF E+    + P+  T+S+++ 
Sbjct: 360 KVESSEKIFGKIANKTLVSWNNMIAAYMYKEMYTEAITLFLELLNQPLYPDYFTMSTVVP 419

Query: 421 ACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVT 480
           A   LG++   + +H  +    +  N  +  A++ MYA+ G++V +RE+FD M  K  ++
Sbjct: 420 AFVLLGSLRHCRQIHSYIIGLGYAENTLIMNAVLHMYARSGDVVASREIFDKMVSKDVIS 479

Query: 481 WNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMI 540
           WNTMI GY +HG G  AL++F EM ++G++P+  TF+SVL ACS +GLV EG   F  M+
Sbjct: 480 WNTMIMGYAIHGQGKTALEMFDEMKYNGLQPNESTFVSVLTACSVSGLVDEGWMHFNLML 539

Query: 541 HDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLA 600
            ++G  P  EHY CM D+LGR G L + L+FI+ + ++P   VWG+LL A     D ++A
Sbjct: 540 QEYGMIPQIEHYGCMTDLLGREGDLREVLQFIESMPIDPTSRVWGSLLTASRNQNDIDIA 599

Query: 601 RVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGT 660
             A+E++F+L+ +N G +++LS++Y+    +     VR ++K++ L +    +L+E+  T
Sbjct: 600 EYAAERIFQLEHDNTGCYIVLSSMYADAGRWEDVERVRLLMKEKGLRRTEPISLVELHST 659

Query: 661 PHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMM-KVHSEK 719
              F +GD  H QS  I+ +   L+ K+ E     +T    + V    +   M   HS +
Sbjct: 660 ACSFANGDMSHSQSRTIHEVSNILSRKIEET---DDTRNQSYPVPVATRTTTMPNKHSVR 716

Query: 720 LAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCS 779
           LA+ FGLI++E G+ I + KN+R+C  CH A K IS+ +GR IVV D+  +H F  G C 
Sbjct: 717 LAVVFGLISSEIGSPILVKKNVRICNHCHHALKLISRYSGRRIVVGDSKIYHEFSDGSCC 776

Query: 780 CGDYW 784
           CGDYW
Sbjct: 777 CGDYW 781



 Score =  182 bits (463), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 122/465 (26%), Positives = 220/465 (47%), Gaps = 11/465 (2%)

Query: 29  HAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNEMP 88
           H  +I  G ++D+ T   L    +       A  +F  +P  D+  +N ++ G+ +N + 
Sbjct: 130 HGMVIKLGLEHDVYTCNSLVAFYAKLGLVEDAERVFDGMPVRDIVTWNTMVDGYVSNGLG 189

Query: 89  KSSICFYTHLRKNTALTPDNFTYSFVLSAASACC---DRSIGVLLHGHAIVSGYGSDLFV 145
             ++  +  +     +  D+     +++A +ACC       G  +HG+ I  G   D+ V
Sbjct: 190 SLALACFQEMHDALEVQHDSVG---IIAALAACCLEVSSMQGKEIHGYVIRHGLEQDIKV 246

Query: 146 GAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGG 205
           G +L+D+Y K   V  AR VF  MP +  V WN MI G   N    ++   F  M R  G
Sbjct: 247 GTSLLDMYCKCGEVAYARSVFATMPLRTVVTWNCMIGGYALNERPDEAFDCFMQM-RAEG 305

Query: 206 TWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAE 265
             ++  +   +L A A+ +    G  +    ++  F  HV + T L+  Y K G+VE +E
Sbjct: 306 LQVEVVTAINLLAACAQTESSLYGRSVHGYVVRRQFLPHVVLETALLEMYGKVGKVESSE 365

Query: 266 LLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFG 325
            +F  I    L+S N MI+ Y        ++ LF +LL      +  T+  ++P F   G
Sbjct: 366 KIFGKIANKTLVSWNNMIAAYMYKEMYTEAITLFLELLNQPLYPDYFTMSTVVPAFVLLG 425

Query: 326 HLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIA 385
            L     IHS+ +  G   N+ ++ A+  +Y+R  ++ A+R++FD+   K + SWN MI 
Sbjct: 426 SLRHCRQIHSYIIGLGYAENTLIMNAVLHMYARSGDVVASREIFDKMVSKDVISWNTMIM 485

Query: 386 GYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVH--ELVKSRNF 443
           GY  +G  + A+ +F EM+ + + PN  T  S+L+AC+  G +  G W+H   +++    
Sbjct: 486 GYAIHGQGKTALEMFDEMKYNGLQPNESTFVSVLTACSVSGLVDEG-WMHFNLMLQEYGM 544

Query: 444 ESNIYVSTALIDMYAKCGNIVEARELFDLMS-HKSEVTWNTMISG 487
              I     + D+  + G++ E  +  + M    +   W ++++ 
Sbjct: 545 IPQIEHYGCMTDLLGREGDLREVLQFIESMPIDPTSRVWGSLLTA 589



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 75/295 (25%), Positives = 151/295 (51%), Gaps = 2/295 (0%)

Query: 24  QLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFS 83
           Q  + H  +I HG + D+   T L           YAR++F ++P   +  +N +I G++
Sbjct: 227 QGKEIHGYVIRHGLEQDIKVGTSLLDMYCKCGEVAYARSVFATMPLRTVVTWNCMIGGYA 286

Query: 84  NNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDL 143
            NE P  +   +  +R    L  +  T   +L+A +       G  +HG+ +   +   +
Sbjct: 287 LNERPDEAFDCFMQMRAE-GLQVEVVTAINLLAACAQTESSLYGRSVHGYVVRRQFLPHV 345

Query: 144 FVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRN 203
            +  AL+++Y K   V+S+ K+F K+  K  V WN+MI+  M    + ++I +F +++ N
Sbjct: 346 VLETALLEMYGKVGKVESSEKIFGKIANKTLVSWNNMIAAYMYKEMYTEAITLFLELL-N 404

Query: 204 GGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVER 263
              + D  +++ V+PA   +  LR   +I    + LG+ ++  ++  ++  Y++ G+V  
Sbjct: 405 QPLYPDYFTMSTVVPAFVLLGSLRHCRQIHSYIIGLGYAENTLIMNAVLHMYARSGDVVA 464

Query: 264 AELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLI 318
           +  +F  +V  D+IS N MI GY  +G+ +++L +F ++  +  + N ST V ++
Sbjct: 465 SREIFDKMVSKDVISWNTMIMGYAIHGQGKTALEMFDEMKYNGLQPNESTFVSVL 519


>gi|413946157|gb|AFW78806.1| hypothetical protein ZEAMMB73_634908 [Zea mays]
          Length = 1145

 Score =  435 bits (1119), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 264/764 (34%), Positives = 418/764 (54%), Gaps = 65/764 (8%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEM-PKSSICFYTHLRKNTALTPDNFTYSFVLSAA 118
           AR LF  +P+ +   + V+I G+   E   ++   F T L +   +TP+      VLSA 
Sbjct: 176 ARNLFERMPERNGVSWTVMISGYVLIEQHGRAWDMFRTMLCE--GMTPEQPNLVSVLSAV 233

Query: 119 SACCD----RSIGVLLHGHAIVSGYGSDLFVGAALVDLYFK-FSWVKSARKVFDKMPEKD 173
                     SI VL+H     +G+  D+ VG A+++ Y K  + + SA K F+ M  ++
Sbjct: 234 RHLGKPGILESIHVLVHK----TGFERDVVVGTAILNGYTKDVNMLDSAVKFFEGMAARN 289

Query: 174 TVLWNSMISGLMKNCCFQDSIWVFG-DMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEI 232
              W+++I+ L +     D+  V+  D +++  +    TS+   L     + + ++  + 
Sbjct: 290 EYTWSTIIAALSQAGRIDDAFAVYQRDPLKSVPS---RTSMLTGLARYGRIDDAKILFD- 345

Query: 233 QCLGLKLGFHD-HVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGK 291
                    H+ +V     +++ Y +   V+ AE LF  +   + IS   MI+GY  NG+
Sbjct: 346 -------QIHEPNVVSWNAMITGYMQNEMVDEAEDLFNRMPFRNTISWAGMIAGYARNGR 398

Query: 292 TESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTA 351
           +E +L   + L       + S++            L     +HS  +K+G   NS V  A
Sbjct: 399 SEQALVSLQALHRKGMLPSLSSLTSSFFACSNIEALETGKQVHSLAVKAGCQFNSYVCNA 458

Query: 352 LSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPN 411
           L T+Y +   + + R++FD  + K   S+N+ ++   QN L +EA  +F  M +    P+
Sbjct: 459 LITLYGKYRSIGSVRQIFDRMTVKDTVSYNSFMSALVQNNLFDEARDVFNNMPS----PD 514

Query: 412 PVTVSSILSACAQ-----------------------------------LGAISLGKWVHE 436
            V+ ++I+SACAQ                                   LGA  LG+ +H 
Sbjct: 515 VVSWTTIISACAQADQGNEAVEIFRSMLHERELPNPPILTILLGLSGNLGAPQLGQQIHT 574

Query: 437 LVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLE 496
           +      +S + V+ AL+ MY KC +  ++ ++FD M  +   TWNT+I+GY  HG G E
Sbjct: 575 IAIKLGMDSGLVVANALVSMYFKCSS-ADSLKVFDSMEERDIFTWNTIITGYAQHGLGRE 633

Query: 497 ALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMV 556
           A++++  M+ +G+ P+ VTF+ +L+ACSH+GLV EG + F+SM  D+G  PL EHYACMV
Sbjct: 634 AIRMYQLMVSAGVLPNEVTFVGLLHACSHSGLVDEGHQFFKSMSSDYGLTPLLEHYACMV 693

Query: 557 DILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVG 616
           D+LGRAG ++ A  FI  + +EP   +W ALLGAC IHK+  + R A+EKLF ++P N G
Sbjct: 694 DLLGRAGDVQGAEHFIYDMPIEPDSVIWSALLGACKIHKNVEIGRRAAEKLFSIEPSNAG 753

Query: 617 YHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTA 676
            +V+LSNIYS++  + + A VR+++K+R + K PGC+ +++    H F +GD+ H Q   
Sbjct: 754 NYVMLSNIYSSQGMWDEVAKVRKLMKERGVNKDPGCSWMQIKNKMHSFVTGDEEHEQIQN 813

Query: 677 IYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIR 736
           IYA L +L   ++  G+  +T   LHD++EE+KE  +  HSEKLA+A+GL+ T  G  I+
Sbjct: 814 IYATLWELYTLLKATGYVPDTDFVLHDIDEEQKESSLLYHSEKLAVAYGLLVTPKGMPIQ 873

Query: 737 IIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSC 780
           I+KNLR+C DCHT  KF+S VT R I VRD NRFHHF+ G CSC
Sbjct: 874 IMKNLRICGDCHTFIKFVSSVTKREIDVRDGNRFHHFRNGSCSC 917



 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 136/518 (26%), Positives = 231/518 (44%), Gaps = 60/518 (11%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           AR +F S+P  D+  +N +I  + NN MP +            A++  N     +L +  
Sbjct: 52  AREVFDSMPFRDIIAWNSMIFAYCNNGMPDAGRSLAD------AISGGNLRTGTILLSGY 105

Query: 120 ACCDRSIGVLLHGHAIVSGYG-SDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWN 178
           A      G +     +  G G  +     A+V  Y +   +  ARK+FD MP +D   WN
Sbjct: 106 A----RAGRVRDARRVFDGMGVRNTVAWNAMVTCYVQNGDITLARKLFDAMPSRDVSSWN 161

Query: 179 SMISGLMKNCCFQDSIWVFGDMV-RNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGL 237
           +M++G   +   +++  +F  M  RNG +W    S   ++       ++   M   C G+
Sbjct: 162 TMLTGYCHSQLMEEARNLFERMPERNGVSWTVMISGYVLIEQHGRAWDMFRTM--LCEGM 219

Query: 238 KLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDI-VRPDLISCNAMISGYTCN-GKTESS 295
                + V VL+  V    K G +E   +L        D++   A+++GYT +    +S+
Sbjct: 220 TPEQPNLVSVLSA-VRHLGKPGILESIHVLVHKTGFERDVVVGTAILNGYTKDVNMLDSA 278

Query: 296 LRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTV 355
           ++ F  + A  E   S+ I  L       G +     ++       + S +S+LT L+  
Sbjct: 279 VKFFEGMAARNEYTWSTIIAALSQA----GRIDDAFAVYQRDPLKSVPSRTSMLTGLAR- 333

Query: 356 YSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEM----------QA 405
           Y R+++   A+ LFD+  E ++ SWNAMI GY QN + +EA  LF  M            
Sbjct: 334 YGRIDD---AKILFDQIHEPNVVSWNAMITGYMQNEMVDEAEDLFNRMPFRNTISWAGMI 390

Query: 406 SKVAPNPVTVSSILS---------------------ACAQLGAISLGKWVHELVKSRNFE 444
           +  A N  +  +++S                     AC+ + A+  GK VH L      +
Sbjct: 391 AGYARNGRSEQALVSLQALHRKGMLPSLSSLTSSFFACSNIEALETGKQVHSLAVKAGCQ 450

Query: 445 SNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEM 504
            N YV  ALI +Y K  +I   R++FD M+ K  V++N+ +S    +    EA  +F+ M
Sbjct: 451 FNSYVCNALITLYGKYRSIGSVRQIFDRMTVKDTVSYNSFMSALVQNNLFDEARDVFNNM 510

Query: 505 LHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHD 542
                 P  V++ +++ AC+ A    E  EIF+SM+H+
Sbjct: 511 PS----PDVVSWTTIISACAQADQGNEAVEIFRSMLHE 544



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 93/396 (23%), Positives = 153/396 (38%), Gaps = 89/396 (22%)

Query: 162 ARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVA 221
           AR+VFD MP +D + WNSMI     N    D+     D +  G                 
Sbjct: 52  AREVFDSMPFRDIIAWNSMIFAYCNNG-MPDAGRSLADAISGGN---------------- 94

Query: 222 EVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNA 281
               LR G                   T L+S Y++ G V  A  +F  +   + ++ NA
Sbjct: 95  ----LRTG-------------------TILLSGYARAGRVRDARRVFDGMGVRNTVAWNA 131

Query: 282 MISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSG 341
           M++ Y  NG    + +LF  + +                                     
Sbjct: 132 MVTCYVQNGDITLARKLFDAMPSR------------------------------------ 155

Query: 342 IVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQ 401
              + S    + T Y     ME AR LF+   E++  SW  MI+GY        A  +F+
Sbjct: 156 ---DVSSWNTMLTGYCHSQLMEEARNLFERMPERNGVSWTVMISGYVLIEQHGRAWDMFR 212

Query: 402 EMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCG 461
            M    + P    + S+LSA   LG   + + +H LV    FE ++ V TA+++ Y K  
Sbjct: 213 TMLCEGMTPEQPNLVSVLSAVRHLGKPGILESIHVLVHKTGFERDVVVGTAILNGYTKDV 272

Query: 462 NIVE-ARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVL 520
           N+++ A + F+ M+ ++E TW+T+I+     G   +A  ++       + PS  + L+  
Sbjct: 273 NMLDSAVKFFEGMAARNEYTWSTIIAALSQAGRIDDAFAVYQRDPLKSV-PSRTSMLT-- 329

Query: 521 YACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMV 556
                 GL R G      ++ D   +P    +  M+
Sbjct: 330 ------GLARYGRIDDAKILFDQIHEPNVVSWNAMI 359



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 66/262 (25%), Positives = 112/262 (42%), Gaps = 36/262 (13%)

Query: 358 RLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEM-------------- 403
           RL  +  AR++FD    + + +WN+MI  Y  NG+ +   SL   +              
Sbjct: 45  RLGRLHEAREVFDSMPFRDIIAWNSMIFAYCNNGMPDAGRSLADAISGGNLRTGTILLSG 104

Query: 404 --QASKV-----------APNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVS 450
             +A +V             N V  +++++   Q G I+L + + + + SR+  S     
Sbjct: 105 YARAGRVRDARRVFDGMGVRNTVAWNAMVTCYVQNGDITLARKLFDAMPSRDVSS----W 160

Query: 451 TALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIR 510
             ++  Y     + EAR LF+ M  ++ V+W  MISGY L      A  +F  ML  G+ 
Sbjct: 161 NTMLTGYCHSQLMEEARNLFERMPERNGVSWTVMISGYVLIEQHGRAWDMFRTMLCEGMT 220

Query: 511 PSGVTFLSVLYACSHAGLVREGD-EIFQSMIHDHGF-KPLAEHYACMVDILGRAGQLEKA 568
           P     +SVL A  H G  + G  E    ++H  GF + +    A +         L+ A
Sbjct: 221 PEQPNLVSVLSAVRHLG--KPGILESIHVLVHKTGFERDVVVGTAILNGYTKDVNMLDSA 278

Query: 569 LEFIKGLAVEPGPAVWGALLGA 590
           ++F +G+A       W  ++ A
Sbjct: 279 VKFFEGMAAR-NEYTWSTIIAA 299



 Score = 42.4 bits (98), Expect = 0.87,   Method: Compositional matrix adjust.
 Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 4/89 (4%)

Query: 451 TALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIR 510
           +A I    + G + EARE+FD M  +  + WN+MI  Y  +G   +A +  ++ +  G  
Sbjct: 37  SARIRELGRLGRLHEAREVFDSMPFRDIIAWNSMIFAYCNNGMP-DAGRSLADAISGGNL 95

Query: 511 PSGVTFLSVLYACSHAGLVREGDEIFQSM 539
            +G   LS     + AG VR+   +F  M
Sbjct: 96  RTGTILLS---GYARAGRVRDARRVFDGM 121


>gi|449441075|ref|XP_004138309.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Cucumis sativus]
          Length = 562

 Score =  435 bits (1119), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 221/507 (43%), Positives = 302/507 (59%)

Query: 278 SCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFC 337
            CN+MI  Y    K  +SL +F  +   +   +SST   ++          +   IH   
Sbjct: 56  QCNSMIRTYLDLNKHLNSLYIFALMHKFSILPDSSTFPAVLKATAQLCDTGVGKMIHGIV 115

Query: 338 LKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAI 397
           ++ G + +    TAL  +Y     +  A +LFDE  E++  +WNA+I GYT N    +AI
Sbjct: 116 IQMGFICDVYTSTALVHLYCTCLSISDASQLFDEMPERNAVTWNALITGYTHNRKFVKAI 175

Query: 398 SLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMY 457
             F+ M A    P+  TV  +LSAC+ LGA + GKW+HE +       N++V TALIDMY
Sbjct: 176 DAFRGMLADGAQPSERTVVVVLSACSHLGAFNQGKWIHEFIYHNRLRLNVFVGTALIDMY 235

Query: 458 AKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFL 517
           AKCG + E  ++F+ +  K+  TWN +ISGY ++G G  ALQ FS ML    +P  VTFL
Sbjct: 236 AKCGAVYEVEKVFEEIREKNVYTWNVLISGYAMNGQGDAALQAFSRMLMENFKPDEVTFL 295

Query: 518 SVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAV 577
            VL AC H GLV EG   F SM    G +P  EHY CMVD+LGRAG LE+ALE I+ +++
Sbjct: 296 GVLCACCHQGLVTEGRWQFMSMKQQFGLQPRIEHYGCMVDLLGRAGLLEEALELIQSMSI 355

Query: 578 EPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATV 637
           EP P +W ALL AC +H +T L     ++L EL+P N   +VLLSNIYS ER + +   +
Sbjct: 356 EPDPIIWRALLCACRVHGNTKLGEYIIKRLIELEPNNGENYVLLSNIYSRERRWAEVGKL 415

Query: 638 RQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTET 697
           R ++  R + K PGC+ IE+    + F + +   P+  AIY  L+ L  K++E G+ T T
Sbjct: 416 RGMMNLRGIRKVPGCSSIEINNVVYEFVASNDRKPEFEAIYKQLDNLIKKLKENGYVTGT 475

Query: 698 VTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKV 757
             AL+D+E+EEKE  +  HSEKLA+AFGL+ +     +RI+KNLR+CLDCH   K +S V
Sbjct: 476 DMALYDIEKEEKEHSVMYHSEKLALAFGLLNSPLDCTLRIVKNLRICLDCHEFFKVLSLV 535

Query: 758 TGRVIVVRDANRFHHFKGGVCSCGDYW 784
             R IVVRD NRFHHF  G CSC DYW
Sbjct: 536 YKRYIVVRDRNRFHHFYEGFCSCRDYW 562



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 88/318 (27%), Positives = 157/318 (49%), Gaps = 3/318 (0%)

Query: 178 NSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGL 237
           NSMI   +      +S+++F  ++       DS++  AVL A A++ +  +G  I  + +
Sbjct: 58  NSMIRTYLDLNKHLNSLYIFA-LMHKFSILPDSSTFPAVLKATAQLCDTGVGKMIHGIVI 116

Query: 238 KLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLR 297
           ++GF   VY  T LV  Y  C  +  A  LF ++   + ++ NA+I+GYT N K   ++ 
Sbjct: 117 QMGFICDVYTSTALVHLYCTCLSISDASQLFDEMPERNAVTWNALITGYTHNRKFVKAID 176

Query: 298 LFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYS 357
            FR +LA   + +  T+V ++      G  +    IH F   + +  N  V TAL  +Y+
Sbjct: 177 AFRGMLADGAQPSERTVVVVLSACSHLGAFNQGKWIHEFIYHNRLRLNVFVGTALIDMYA 236

Query: 358 RLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSS 417
           +   +    K+F+E  EK++ +WN +I+GY  NG  + A+  F  M      P+ VT   
Sbjct: 237 KCGAVYEVEKVFEEIREKNVYTWNVLISGYAMNGQGDAALQAFSRMLMENFKPDEVTFLG 296

Query: 418 ILSACAQLGAISLGKWVHELVKSR-NFESNIYVSTALIDMYAKCGNIVEARELFDLMSHK 476
           +L AC   G ++ G+W    +K +   +  I     ++D+  + G + EA EL   MS +
Sbjct: 297 VLCACCHQGLVTEGRWQFMSMKQQFGLQPRIEHYGCMVDLLGRAGLLEEALELIQSMSIE 356

Query: 477 SE-VTWNTMISGYGLHGH 493
            + + W  ++    +HG+
Sbjct: 357 PDPIIWRALLCACRVHGN 374



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 97/359 (27%), Positives = 168/359 (46%), Gaps = 35/359 (9%)

Query: 76  NVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAI 135
           N +IR + +     +S+  +  + K + L PD+ T+  VL A +  CD  +G ++HG  I
Sbjct: 58  NSMIRTYLDLNKHLNSLYIFALMHKFSIL-PDSSTFPAVLKATAQLCDTGVGKMIHGIVI 116

Query: 136 VSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIW 195
             G+  D++   ALV LY     +  A ++FD+MPE++ V WN++I+G   N  F  +I 
Sbjct: 117 QMGFICDVYTSTALVHLYCTCLSISDASQLFDEMPERNAVTWNALITGYTHNRKFVKAID 176

Query: 196 VFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFY 255
            F  M+ +G    + T V  VL A + +     G  I           +V+V T L+  Y
Sbjct: 177 AFRGMLADGAQPSERT-VVVVLSACSHLGAFNQGKWIHEFIYHNRLRLNVFVGTALIDMY 235

Query: 256 SKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIV 315
           +KCG V   E +F +I   ++ + N +ISGY  NG+ +++L+ F ++L    + +  T +
Sbjct: 236 AKCGAVYEVEKVFEEIREKNVYTWNVLISGYAMNGQGDAALQAFSRMLMENFKPDEVTFL 295

Query: 316 GLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEK 375
           G+           L  C H      G+V+             R   M   ++      + 
Sbjct: 296 GV-----------LCACCH-----QGLVTE-----------GRWQFMSMKQQF---GLQP 325

Query: 376 SLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWV 434
            +  +  M+    + GL EEA+ L Q M    + P+P+   ++L AC   G   LG+++
Sbjct: 326 RIEHYGCMVDLLGRAGLLEEALELIQSMS---IEPDPIIWRALLCACRVHGNTKLGEYI 381


>gi|414887370|tpg|DAA63384.1| TPA: hypothetical protein ZEAMMB73_689576 [Zea mays]
          Length = 802

 Score =  435 bits (1119), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 246/710 (34%), Positives = 368/710 (51%), Gaps = 73/710 (10%)

Query: 148 ALVDLYFKFSWVKSARKVFDKMP--EKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGG 205
           +LV  Y     + +A   FD +P   +DTVL N++IS   +      ++ VF  ++ +G 
Sbjct: 93  SLVAAYAAADRLPAAVSFFDAVPPARRDTVLHNAVISAYARASHAAPAVAVFRSLLASGS 152

Query: 206 TWLDSTSVAAVLPAVAEVQEL--RLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKC----- 258
              D  S  A+L A   +  +  R   ++ C  LK G    + V   LV+ Y KC     
Sbjct: 153 LRPDDYSFTALLSAGGHLPNISVRHCAQLHCSVLKSGAGGALSVCNALVALYMKCESPEA 212

Query: 259 -----------------------------GEVERAELLFRDIVRPDLISCNAMISGYTCN 289
                                        G+V  A  +F ++     +  NAMISGY  +
Sbjct: 213 TRDARKVLDEMPNKDDLTWTTMVVGYVRRGDVGAARSVFEEVDGKFDVVWNAMISGYVHS 272

Query: 290 GKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHS--FCLKSGIVSNSS 347
           G    +  LFR+++     ++  T   ++      G       +H     L+   V  ++
Sbjct: 273 GMAVEAFELFRRMVLERVPLDEFTFTSVLSACANVGLFAHGKSVHGQIIRLQPNFVPEAA 332

Query: 348 --VLTALSTVYSRLNEMEAARKLFDESSEKSLASWNA----------------------- 382
             V  AL T YS+   +  AR++FD  + K + SWN                        
Sbjct: 333 LPVNNALVTFYSKCGNIAVARRIFDNMTLKDVVSWNTILSGYVESSCLDKAVEVFEEMPY 392

Query: 383 --------MIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWV 434
                   M++GY   G  E+A+ LF +M++  V P   T +  ++AC +LGA+  GK +
Sbjct: 393 KNELSWMVMVSGYVHGGFAEDALKLFNKMRSENVKPCDYTYAGAIAACGELGALKHGKQL 452

Query: 435 HELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHG 494
           H  +    FE +     ALI MYA+CG + EA  +F +M +   V+WN MIS  G HGHG
Sbjct: 453 HGHIVQLGFEGSNSAGNALITMYARCGAVKEAHLMFLVMPNIDSVSWNAMISALGQHGHG 512

Query: 495 LEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYAC 554
            EAL+LF  M+  GI P  ++FL+VL AC+H+GLV EG   F+SM  D G  P  +HY  
Sbjct: 513 REALELFDRMVAEGIYPDRISFLTVLTACNHSGLVDEGFRYFESMKRDFGIIPGEDHYTR 572

Query: 555 MVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPEN 614
           ++D+LGRAG++ +A + IK +  EP P++W A+L  C    D  L   A+++LF++ P++
Sbjct: 573 LIDLLGRAGRIGEARDLIKTMPFEPTPSIWEAILSGCRTSGDMELGAHAADQLFKMTPQH 632

Query: 615 VGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQS 674
            G ++LLSN YSA   ++ AA VR++++ R + K PGC+ IE G   HVF  GD  HP++
Sbjct: 633 DGTYILLSNTYSAAGCWVDAARVRKLMRDRGVKKEPGCSWIEAGNKVHVFLVGDTKHPEA 692

Query: 675 TAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTE 734
             +Y  LE +  KMR+ G+  +T   LHD+E  +KE ++  HSE+LA+ FGL+   PG  
Sbjct: 693 HEVYKFLEMVGAKMRKLGYVPDTKVVLHDMEPHQKEHILFAHSERLAVGFGLLNLPPGAT 752

Query: 735 IRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           + ++KNLR+C DCH A  F+SK  GR IVVRD  RFHHFK G CSCG+YW
Sbjct: 753 VTVLKNLRICDDCHAAIMFMSKAVGREIVVRDVRRFHHFKDGECSCGNYW 802



 Score =  145 bits (367), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 135/506 (26%), Positives = 216/506 (42%), Gaps = 82/506 (16%)

Query: 60  ARALFFSIP--KPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSA 117
           A + F ++P  + D  L N +I  ++       ++  +  L  + +L PD+++++ +LSA
Sbjct: 107 AVSFFDAVPPARRDTVLHNAVISAYARASHAAPAVAVFRSLLASGSLRPDDYSFTALLSA 166

Query: 118 ASACCDRSIG--VLLHGHAIVSGYGSDLFVGAALVDLYFKFS---WVKSARKVFDKMPEK 172
                + S+     LH   + SG G  L V  ALV LY K       + ARKV D+MP K
Sbjct: 167 GGHLPNISVRHCAQLHCSVLKSGAGGALSVCNALVALYMKCESPEATRDARKVLDEMPNK 226

Query: 173 D-------------------------------TVLWNSMISGLMKNCCFQDSIWVFGDMV 201
           D                                V+WN+MISG + +    ++  +F  MV
Sbjct: 227 DDLTWTTMVVGYVRRGDVGAARSVFEEVDGKFDVVWNAMISGYVHSGMAVEAFELFRRMV 286

Query: 202 RNGGTWLDSTSVAAVLPAVAEVQELRLGMEI--QCLGLKLGF--HDHVYVLTGLVSFYSK 257
                 LD  +  +VL A A V     G  +  Q + L+  F     + V   LV+FYSK
Sbjct: 287 LE-RVPLDEFTFTSVLSACANVGLFAHGKSVHGQIIRLQPNFVPEAALPVNNALVTFYSK 345

Query: 258 CGEVERAELLFRDIVRPDLISCNA-------------------------------MISGY 286
           CG +  A  +F ++   D++S N                                M+SGY
Sbjct: 346 CGNIAVARRIFDNMTLKDVVSWNTILSGYVESSCLDKAVEVFEEMPYKNELSWMVMVSGY 405

Query: 287 TCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNS 346
              G  E +L+LF ++ +   +    T  G I      G L     +H   ++ G   ++
Sbjct: 406 VHGGFAEDALKLFNKMRSENVKPCDYTYAGAIAACGELGALKHGKQLHGHIVQLGFEGSN 465

Query: 347 SVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQAS 406
           S   AL T+Y+R   ++ A  +F         SWNAMI+   Q+G   EA+ LF  M A 
Sbjct: 466 SAGNALITMYARCGAVKEAHLMFLVMPNIDSVSWNAMISALGQHGHGREALELFDRMVAE 525

Query: 407 KVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNF----ESNIYVSTALIDMYAKCGN 462
            + P+ ++  ++L+AC   G +  G    E +K R+F      + Y  T LID+  + G 
Sbjct: 526 GIYPDRISFLTVLTACNHSGLVDEGFRYFESMK-RDFGIIPGEDHY--TRLIDLLGRAGR 582

Query: 463 IVEARELFDLMSHKSEVT-WNTMISG 487
           I EAR+L   M  +   + W  ++SG
Sbjct: 583 IGEARDLIKTMPFEPTPSIWEAILSG 608



 Score =  128 bits (322), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 108/395 (27%), Positives = 174/395 (44%), Gaps = 77/395 (19%)

Query: 249 TGLVSFYSKCGEVERAELLFRDIVRP---DLISCNAMISGYTCNGKTESSLRLFRQLLAS 305
           T LV+ Y+    +  A + F D V P   D +  NA+IS Y        ++ +FR LLAS
Sbjct: 92  TSLVAAYAAADRLP-AAVSFFDAVPPARRDTVLHNAVISAYARASHAAPAVAVFRSLLAS 150

Query: 306 AE-RVNSSTIVGLIPVFYPFGHLHLTNC--IHSFCLKSGIVSNSSVLTALSTVYSRLNEM 362
              R +  +   L+       ++ + +C  +H   LKSG     SV  AL  +Y +    
Sbjct: 151 GSLRPDDYSFTALLSAGGHLPNISVRHCAQLHCSVLKSGAGGALSVCNALVALYMKCESP 210

Query: 363 EA---ARKLFDESSEKSLASWNAMI-------------------------------AGYT 388
           EA   ARK+ DE   K   +W  M+                               +GY 
Sbjct: 211 EATRDARKVLDEMPNKDDLTWTTMVVGYVRRGDVGAARSVFEEVDGKFDVVWNAMISGYV 270

Query: 389 QNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVH-ELVK-SRNF--E 444
            +G+  EA  LF+ M   +V  +  T +S+LSACA +G  + GK VH ++++   NF  E
Sbjct: 271 HSGMAVEAFELFRRMVLERVPLDEFTFTSVLSACANVGLFAHGKSVHGQIIRLQPNFVPE 330

Query: 445 SNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNT--------------------- 483
           + + V+ AL+  Y+KCGNI  AR +FD M+ K  V+WNT                     
Sbjct: 331 AALPVNNALVTFYSKCGNIAVARRIFDNMTLKDVVSWNTILSGYVESSCLDKAVEVFEEM 390

Query: 484 ----------MISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGD 533
                     M+SGY   G   +AL+LF++M    ++P   T+   + AC   G ++ G 
Sbjct: 391 PYKNELSWMVMVSGYVHGGFAEDALKLFNKMRSENVKPCDYTYAGAIAACGELGALKHGK 450

Query: 534 EIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKA 568
           ++   ++   GF+        ++ +  R G +++A
Sbjct: 451 QLHGHIVQ-LGFEGSNSAGNALITMYARCGAVKEA 484



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 62/268 (23%), Positives = 116/268 (43%), Gaps = 12/268 (4%)

Query: 55  KATCYARAL--FFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYS 112
           +++C  +A+  F  +P  +   + V++ G+ +    + ++  +  +R    + P ++TY+
Sbjct: 376 ESSCLDKAVEVFEEMPYKNELSWMVMVSGYVHGGFAEDALKLFNKMRSEN-VKPCDYTYA 434

Query: 113 FVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEK 172
             ++A         G  LHGH +  G+      G AL+ +Y +   VK A  +F  MP  
Sbjct: 435 GAIAACGELGALKHGKQLHGHIVQLGFEGSNSAGNALITMYARCGAVKEAHLMFLVMPNI 494

Query: 173 DTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGME- 231
           D+V WN+MIS L ++   ++++ +F  MV   G + D  S   VL A      +  G   
Sbjct: 495 DSVSWNAMISALGQHGHGREALELFDRMVAE-GIYPDRISFLTVLTACNHSGLVDEGFRY 553

Query: 232 IQCLGLKLGF---HDHVYVLTGLVSFYSKCGEVERAELLFRDI-VRPDLISCNAMISGYT 287
            + +    G     DH    T L+    + G +  A  L + +   P      A++SG  
Sbjct: 554 FESMKRDFGIIPGEDH---YTRLIDLLGRAGRIGEARDLIKTMPFEPTPSIWEAILSGCR 610

Query: 288 CNGKTESSLRLFRQLLASAERVNSSTIV 315
            +G  E       QL     + + + I+
Sbjct: 611 TSGDMELGAHAADQLFKMTPQHDGTYIL 638


>gi|449477559|ref|XP_004155057.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Cucumis sativus]
          Length = 562

 Score =  435 bits (1119), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 221/507 (43%), Positives = 302/507 (59%)

Query: 278 SCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFC 337
            CN+MI  Y    K  +SL +F  +   +   +SST   ++          +   IH   
Sbjct: 56  QCNSMIRTYLDLNKHLNSLYIFALMHKFSILPDSSTFPAVLKATAQLCDTGVGKMIHGIV 115

Query: 338 LKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAI 397
           ++ G + +    TAL  +Y     +  A +LFDE  E++  +WNA+I GYT N    +AI
Sbjct: 116 IQMGFICDVYTSTALVHLYCTCLSISDASQLFDEMPERNAVTWNALITGYTHNRKFVKAI 175

Query: 398 SLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMY 457
             F+ M A    P+  TV  +LSAC+ LGA + GKW+HE +       N++V TALIDMY
Sbjct: 176 DAFRGMLADGAQPSERTVVVVLSACSHLGAFNQGKWIHEFIYHNRLRLNVFVGTALIDMY 235

Query: 458 AKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFL 517
           AKCG + E  ++F+ +  K+  TWN +ISGY ++G G  ALQ FS ML    +P  VTFL
Sbjct: 236 AKCGAVYEVEKVFEEIREKNVYTWNVLISGYAMNGQGDAALQAFSRMLMENFKPDEVTFL 295

Query: 518 SVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAV 577
            VL AC H GLV EG   F SM    G +P  EHY CMVD+LGRAG LE+ALE I+ +++
Sbjct: 296 GVLCACCHQGLVTEGRWQFMSMKQQFGLQPRIEHYGCMVDLLGRAGLLEEALELIQSMSI 355

Query: 578 EPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATV 637
           EP P +W ALL AC +H +T L     ++L EL+P N   +VLLSNIYS ER + +   +
Sbjct: 356 EPDPIIWRALLCACRVHGNTKLGEYIIKRLIELEPNNGENYVLLSNIYSRERRWAEVGKL 415

Query: 638 RQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTET 697
           R ++  R + K PGC+ IE+    + F + +   P+  AIY  L+ L  K++E G+ T T
Sbjct: 416 RGMMSLRGIRKVPGCSSIEINNVVYEFVASNDRKPEFEAIYKQLDNLIKKLKENGYVTGT 475

Query: 698 VTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKV 757
             AL+D+E+EEKE  +  HSEKLA+AFGL+ +     +RI+KNLR+CLDCH   K +S V
Sbjct: 476 DMALYDIEKEEKEHSVMYHSEKLALAFGLLNSPLDCTLRIVKNLRICLDCHEFFKVLSLV 535

Query: 758 TGRVIVVRDANRFHHFKGGVCSCGDYW 784
             R IVVRD NRFHHF  G CSC DYW
Sbjct: 536 YKRYIVVRDRNRFHHFYEGFCSCRDYW 562



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 88/318 (27%), Positives = 157/318 (49%), Gaps = 3/318 (0%)

Query: 178 NSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGL 237
           NSMI   +      +S+++F  ++       DS++  AVL A A++ +  +G  I  + +
Sbjct: 58  NSMIRTYLDLNKHLNSLYIFA-LMHKFSILPDSSTFPAVLKATAQLCDTGVGKMIHGIVI 116

Query: 238 KLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLR 297
           ++GF   VY  T LV  Y  C  +  A  LF ++   + ++ NA+I+GYT N K   ++ 
Sbjct: 117 QMGFICDVYTSTALVHLYCTCLSISDASQLFDEMPERNAVTWNALITGYTHNRKFVKAID 176

Query: 298 LFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYS 357
            FR +LA   + +  T+V ++      G  +    IH F   + +  N  V TAL  +Y+
Sbjct: 177 AFRGMLADGAQPSERTVVVVLSACSHLGAFNQGKWIHEFIYHNRLRLNVFVGTALIDMYA 236

Query: 358 RLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSS 417
           +   +    K+F+E  EK++ +WN +I+GY  NG  + A+  F  M      P+ VT   
Sbjct: 237 KCGAVYEVEKVFEEIREKNVYTWNVLISGYAMNGQGDAALQAFSRMLMENFKPDEVTFLG 296

Query: 418 ILSACAQLGAISLGKWVHELVKSR-NFESNIYVSTALIDMYAKCGNIVEARELFDLMSHK 476
           +L AC   G ++ G+W    +K +   +  I     ++D+  + G + EA EL   MS +
Sbjct: 297 VLCACCHQGLVTEGRWQFMSMKQQFGLQPRIEHYGCMVDLLGRAGLLEEALELIQSMSIE 356

Query: 477 SE-VTWNTMISGYGLHGH 493
            + + W  ++    +HG+
Sbjct: 357 PDPIIWRALLCACRVHGN 374



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 97/359 (27%), Positives = 168/359 (46%), Gaps = 35/359 (9%)

Query: 76  NVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAI 135
           N +IR + +     +S+  +  + K + L PD+ T+  VL A +  CD  +G ++HG  I
Sbjct: 58  NSMIRTYLDLNKHLNSLYIFALMHKFSIL-PDSSTFPAVLKATAQLCDTGVGKMIHGIVI 116

Query: 136 VSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIW 195
             G+  D++   ALV LY     +  A ++FD+MPE++ V WN++I+G   N  F  +I 
Sbjct: 117 QMGFICDVYTSTALVHLYCTCLSISDASQLFDEMPERNAVTWNALITGYTHNRKFVKAID 176

Query: 196 VFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFY 255
            F  M+ +G    + T V  VL A + +     G  I           +V+V T L+  Y
Sbjct: 177 AFRGMLADGAQPSERT-VVVVLSACSHLGAFNQGKWIHEFIYHNRLRLNVFVGTALIDMY 235

Query: 256 SKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIV 315
           +KCG V   E +F +I   ++ + N +ISGY  NG+ +++L+ F ++L    + +  T +
Sbjct: 236 AKCGAVYEVEKVFEEIREKNVYTWNVLISGYAMNGQGDAALQAFSRMLMENFKPDEVTFL 295

Query: 316 GLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEK 375
           G+           L  C H      G+V+             R   M   ++      + 
Sbjct: 296 GV-----------LCACCH-----QGLVTE-----------GRWQFMSMKQQF---GLQP 325

Query: 376 SLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWV 434
            +  +  M+    + GL EEA+ L Q M    + P+P+   ++L AC   G   LG+++
Sbjct: 326 RIEHYGCMVDLLGRAGLLEEALELIQSMS---IEPDPIIWRALLCACRVHGNTKLGEYI 381


>gi|108862088|gb|ABA96198.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 692

 Score =  435 bits (1119), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 224/559 (40%), Positives = 321/559 (57%)

Query: 226 LRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISG 285
           LR G ++    LKL  H + +VLT L++ Y++CG + RA+ +F ++  P  +S  A+I+ 
Sbjct: 134 LRAGEQLHARSLKLPSHTNPHVLTSLLTLYARCGLLHRAQRVFDEMPHPSTVSWTALITA 193

Query: 286 YTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSN 345
           Y   G    ++ + R   A+  R +S T V ++        L     +     + GI  +
Sbjct: 194 YMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARVADLATGETVWRAAEQEGIAQS 253

Query: 346 SSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQA 405
             V TA   +Y +  EM  AR++FD+  +K   +W AM+ GY  NG   EA+ LF  MQA
Sbjct: 254 VFVATAAVDLYVKCGEMAKAREVFDKMRDKDAVAWGAMVGGYASNGHPREALDLFLAMQA 313

Query: 406 SKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVE 465
             V P+   V+  LSAC +LGA+ LG+    +V    F  N  + TALIDMYAKCG+  E
Sbjct: 314 EGVRPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCGSTAE 373

Query: 466 ARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSH 525
           A  +F  M  K  + WN MI G G+ GH   A  L  +M  SG++ +  TF+ +L +C+H
Sbjct: 374 AWVVFQQMRKKDIIVWNAMILGLGMTGHEKTAFTLIGQMEKSGVKLNDNTFIGLLCSCTH 433

Query: 526 AGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWG 585
            GL+++G   F +M   +   P  EHY C+VD+L RAG L++A + I  + +     + G
Sbjct: 434 TGLIQDGRRYFHNMTKLYHISPRIEHYGCIVDLLSRAGLLQEAHQLIDDMPMPANAVILG 493

Query: 586 ALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRK 645
           ALLG C IH++  LA     +L  L+P N G +V+LSNIYS    +  AA +R  +K++ 
Sbjct: 494 ALLGGCKIHRNAELAEHVLTQLIRLEPWNSGNYVMLSNIYSNRGRWEDAAKLRLDMKEKG 553

Query: 646 LAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVE 705
           + K P C+ +E  G  H F  GD+ HP S  IY  L++L  +M+  G++  T   + DVE
Sbjct: 554 VEKVPACSWVEFEGKVHEFRVGDKSHPLSDQIYKKLDELGLEMKTMGYEPTTEVVMFDVE 613

Query: 706 EEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVR 765
           +EEKE  +  HSEKLAIAF L+ T PG  IR+ KNLRVC DCHTA K IS++T R I+VR
Sbjct: 614 DEEKEHTLVHHSEKLAIAFNLLVTGPGETIRVTKNLRVCSDCHTAIKLISRITHREIIVR 673

Query: 766 DANRFHHFKGGVCSCGDYW 784
           D NRFH F+ G CSC DYW
Sbjct: 674 DNNRFHCFRDGSCSCNDYW 692



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 104/404 (25%), Positives = 179/404 (44%), Gaps = 4/404 (0%)

Query: 105 TPDNFTYSFVLSAASACCDR-SIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSAR 163
            P + T+   L +AS        G  LH  ++     ++  V  +L+ LY +   +  A+
Sbjct: 114 NPSHLTFPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLTLYARCGLLHRAQ 173

Query: 164 KVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEV 223
           +VFD+MP   TV W ++I+  M     ++++ V  +   N G   DS +   VL A A V
Sbjct: 174 RVFDEMPHPSTVSWTALITAYMDAGDLREAVHVARNAFAN-GMRPDSFTAVRVLTACARV 232

Query: 224 QELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMI 283
            +L  G  +     + G    V+V T  V  Y KCGE+ +A  +F  +   D ++  AM+
Sbjct: 233 ADLATGETVWRAAEQEGIAQSVFVATAAVDLYVKCGEMAKAREVFDKMRDKDAVAWGAMV 292

Query: 284 SGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIV 343
            GY  NG    +L LF  + A   R +   + G +      G L L             +
Sbjct: 293 GGYASNGHPREALDLFLAMQAEGVRPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFL 352

Query: 344 SNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEM 403
            N  + TAL  +Y++      A  +F +  +K +  WNAMI G    G  + A +L  +M
Sbjct: 353 DNPVLGTALIDMYAKCGSTAEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKTAFTLIGQM 412

Query: 404 QASKVAPNPVTVSSILSACAQLGAISLG-KWVHELVKSRNFESNIYVSTALIDMYAKCGN 462
           + S V  N  T   +L +C   G I  G ++ H + K  +    I     ++D+ ++ G 
Sbjct: 413 EKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCIVDLLSRAGL 472

Query: 463 IVEARELFDLMSHKSE-VTWNTMISGYGLHGHGLEALQLFSEML 505
           + EA +L D M   +  V    ++ G  +H +   A  + ++++
Sbjct: 473 LQEAHQLIDDMPMPANAVILGALLGGCKIHRNAELAEHVLTQLI 516



 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 107/421 (25%), Positives = 185/421 (43%), Gaps = 44/421 (10%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKN---TALTPDNFTYSFVLS 116
           A+ +F  +P P    +  +I  +    M    +    H+ +N     + PD+FT   VL+
Sbjct: 172 AQRVFDEMPHPSTVSWTALITAY----MDAGDLREAVHVARNAFANGMRPDSFTAVRVLT 227

Query: 117 AASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVL 176
           A +   D + G  +   A   G    +FV  A VDLY K   +  AR+VFDKM +KD V 
Sbjct: 228 ACARVADLATGETVWRAAEQEGIAQSVFVATAAVDLYVKCGEMAKAREVFDKMRDKDAVA 287

Query: 177 WNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLG 236
           W +M+ G   N   ++++ +F  M +  G   D  +VA  L A   +  L LG +   + 
Sbjct: 288 WGAMVGGYASNGHPREALDLFLAM-QAEGVRPDCYAVAGALSACTRLGALDLGRQAIRMV 346

Query: 237 LKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSL 296
               F D+  + T L+  Y+KCG    A ++F+ + + D+I  NAMI G    G  +++ 
Sbjct: 347 DWDEFLDNPVLGTALIDMYAKCGSTAEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKTAF 406

Query: 297 RLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVY 356
            L  Q+  S  ++N +T +GL           L +C H+  ++ G     + +T L  + 
Sbjct: 407 TLIGQMEKSGVKLNDNTFIGL-----------LCSCTHTGLIQDGRRYFHN-MTKLYHIS 454

Query: 357 SRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVS 416
            R+                    +  ++   ++ GL +EA  L  +M    +  N V + 
Sbjct: 455 PRIEH------------------YGCIVDLLSRAGLLQEAHQLIDDM---PMPANAVILG 493

Query: 417 SILSACAQLGAISLGKWV-HELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSH 475
           ++L  C       L + V  +L++   + S  YV   L ++Y+  G   +A +L   M  
Sbjct: 494 ALLGGCKIHRNAELAEHVLTQLIRLEPWNSGNYV--MLSNIYSNRGRWEDAAKLRLDMKE 551

Query: 476 K 476
           K
Sbjct: 552 K 552


>gi|302791754|ref|XP_002977643.1| hypothetical protein SELMODRAFT_107700 [Selaginella moellendorffii]
 gi|300154346|gb|EFJ20981.1| hypothetical protein SELMODRAFT_107700 [Selaginella moellendorffii]
          Length = 879

 Score =  435 bits (1118), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 272/794 (34%), Positives = 433/794 (54%), Gaps = 26/794 (3%)

Query: 6   PQSRNLFLSLLKGAKTQSQLTQTHAQI--IIHG--FQNDLSTVTKLAHRLSDFKATCYAR 61
           P +RN F+++L       +L +   +I  ++ G   ++D    T L H      +   AR
Sbjct: 97  PVNRN-FVAVLGACSADPELLEEGRRIHGVLRGTAMESDHYVSTTLLHMYGKCSSVEDAR 155

Query: 62  ALFFSIPKPDLFLFNVIIRGFSNNEMPKSSI-CFYTHLRKNTALTPDNFTYSFVLSAASA 120
            +F  I    +  +N +I  ++  +  + +I  FY  L +   +  +  T+  VL A S 
Sbjct: 156 KVFDGIRHKRVVEWNAMITAYAQQDHHEQAIQVFYAMLLE--GVKAERITFIGVLDACSK 213

Query: 121 CCDRSIGVLL--------HGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEK 172
             D  +  L+        H H   S + +      ALV+ Y     ++ A + F +    
Sbjct: 214 LKDLEVAKLVKLCVEEREHDHLHDSSFAT------ALVNFYGSCGDLEQAFRAFSRH-RL 266

Query: 173 DTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEI 232
           + +L  +MI+   +   + +++ +F  M+  G   LD  +  AVL A +  + L  G  I
Sbjct: 267 ELILATAMITQYTQRERWDEALELFKVMLLEG-VKLDRIACMAVLNACSGPRGLEEGRII 325

Query: 233 QCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKT 292
                ++ F  HV     L++ Y KCG +E A  +FR +   D+IS N +I+ +  + + 
Sbjct: 326 HGFMREIRFDRHVNAGNALINMYGKCGSLEEAVEVFRSMQHRDVISWNTIIAAHGQHSQH 385

Query: 293 ESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTAL 352
             +L L   +     + +  + V  +P+      L     IHS+ ++SGI ++  +  A+
Sbjct: 386 PEALHLLHLMQLDGVKADKISFVNALPLCATSEALAKGRMIHSWIVESGIKADVMLDNAI 445

Query: 353 STVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYT-QNGLTEEAISLFQEMQASKVAPN 411
             +Y      + A ++F     +   SWNAMI  Y  Q  L+ EA+ LFQ+MQ     P+
Sbjct: 446 LDMYGSCKSTDDASRVFRAMKVRDQVSWNAMITAYAAQPRLSSEALLLFQQMQLHGFMPD 505

Query: 412 PVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFD 471
            ++  + LSACA   +++ GK +H+ ++    ESN+ V+ A+++MYAK G +V AR++F 
Sbjct: 506 VISFVAALSACAAQASLAEGKLLHDRIRETGLESNMTVANAVLNMYAKSGTLVLARKMFG 565

Query: 472 LMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVRE 531
            M     ++WN MIS +  HGH  + L+ F  M H G  P+ VTF+SV+ ACSH GLV++
Sbjct: 566 KMPLPDVISWNGMISAFAQHGHADQVLRFFRRMNHEGKLPNDVTFVSVVSACSHGGLVKD 625

Query: 532 GDEIFQSMIHDH-GFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGA 590
           G ++F S++HD     P AEHY CMVD++ RAG+L+ A +FI    ++P   +   +LGA
Sbjct: 626 GVQLFVSLLHDFPTISPRAEHYYCMVDLIARAGKLDAAEKFIAAAPLKPDRVIHSTMLGA 685

Query: 591 CMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAP 650
             +HKD   AR ++E L EL P+    +V+LSN+Y       + A +R+++ ++ + K P
Sbjct: 686 SKVHKDVERARKSAEHLMELTPDRSAAYVVLSNLYDEVGKKDEGAKIRRLMYEKNIRKEP 745

Query: 651 GCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKE 710
             + I V    H F +GD  + ++  I   LE+L+ +M +AG+  +T   LHDV +E+K+
Sbjct: 746 AFSSIAVKRRVHEFFTGDTTNARTPEILEELERLSLEMAKAGYTPDTTLMLHDVGDEQKK 805

Query: 711 LMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRF 770
            ++  HSEKLAIAFGLI+T PGT +RIIKNLRVC DCHTATKFISK+TGR IVVRD++RF
Sbjct: 806 RLLSYHSEKLAIAFGLISTAPGTSLRIIKNLRVCGDCHTATKFISKITGREIVVRDSHRF 865

Query: 771 HHFKGGVCSCGDYW 784
           HHF  G CSCGDYW
Sbjct: 866 HHFDNGTCSCGDYW 879



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 122/484 (25%), Positives = 218/484 (45%), Gaps = 9/484 (1%)

Query: 111 YSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMP 170
           Y+ +L   +      +G  +H     S      F+G  LV +Y     +  A+  FD+MP
Sbjct: 1   YADLLDVVADSRSLDLGKEVHARICKSAMDRGPFMGDLLVRMYVDCGSLIDAKACFDRMP 60

Query: 171 EKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGM 230
            +D + W  +I    +    + ++ +F  M   G   ++   VA +    A+ + L  G 
Sbjct: 61  VQDALTWARLIRAHGQIGDSEQALHLFRSMQLEGVAPVNRNFVAVLGACSADPELLEEGR 120

Query: 231 EIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNG 290
            I  +          YV T L+  Y KC  VE A  +F  I    ++  NAMI+ Y    
Sbjct: 121 RIHGVLRGTAMESDHYVSTTLLHMYGKCSSVEDARKVFDGIRHKRVVEWNAMITAYAQQD 180

Query: 291 KTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKS---GIVSNSS 347
             E ++++F  +L    +    T +G++        L +   +   C++      + +SS
Sbjct: 181 HHEQAIQVFYAMLLEGVKAERITFIGVLDACSKLKDLEVAKLV-KLCVEEREHDHLHDSS 239

Query: 348 VLTALSTVYSRLNEMEAARKLFDESS-EKSLASWNAMIAGYTQNGLTEEAISLFQEMQAS 406
             TAL   Y    ++E A + F     E  LA+  AMI  YTQ    +EA+ LF+ M   
Sbjct: 240 FATALVNFYGSCGDLEQAFRAFSRHRLELILAT--AMITQYTQRERWDEALELFKVMLLE 297

Query: 407 KVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEA 466
            V  + +   ++L+AC+    +  G+ +H  ++   F+ ++    ALI+MY KCG++ EA
Sbjct: 298 GVKLDRIACMAVLNACSGPRGLEEGRIIHGFMREIRFDRHVNAGNALINMYGKCGSLEEA 357

Query: 467 RELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHA 526
            E+F  M H+  ++WNT+I+ +G H    EAL L   M   G++   ++F++ L  C+ +
Sbjct: 358 VEVFRSMQHRDVISWNTIIAAHGQHSQHPEALHLLHLMQLDGVKADKISFVNALPLCATS 417

Query: 527 GLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGA 586
             + +G  +  S I + G K        ++D+ G     + A    + + V    + W A
Sbjct: 418 EALAKG-RMIHSWIVESGIKADVMLDNAILDMYGSCKSTDDASRVFRAMKVRDQVS-WNA 475

Query: 587 LLGA 590
           ++ A
Sbjct: 476 MITA 479


>gi|225425100|ref|XP_002272744.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Vitis vinifera]
          Length = 622

 Score =  435 bits (1118), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 247/614 (40%), Positives = 354/614 (57%), Gaps = 40/614 (6%)

Query: 208 LDSTSVAA----VLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYS--KCGEV 261
           L S S AA    +L   + ++ELR   +I    LK G        + L++F +    G +
Sbjct: 12  LSSESNAAQTLHLLQRCSNMEELR---QIHGQMLKTGLILDEIPASKLLAFCASPNSGSL 68

Query: 262 ERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVF 321
             A  +F  I RP+    N MI GY+ + + E +L L+  +L  +   N+ T   L+   
Sbjct: 69  AYARTVFDRIFRPNTFMWNTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKAC 128

Query: 322 YPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWN 381
                L  T  IH+  +K G  S      +L  VYS+  ++++AR LFD+  ++   SWN
Sbjct: 129 SSMSALEETQQIHAHIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDTVSWN 188

Query: 382 AMIAGYTQNGLTE-------------------------------EAISLFQEMQASKVAP 410
           +MI GYT+ G  E                               EA++LF  MQ + +  
Sbjct: 189 SMIDGYTKCGEIEMAYEIFNHMPERNIISWTSMISGCVGAGKPKEALNLFHRMQTAGIKL 248

Query: 411 NPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELF 470
           + V + S L ACA LG +  GKW+H  +K    E +  +   LIDMYAKCG++ EA E+F
Sbjct: 249 DNVALVSTLQACADLGVLDQGKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAIEVF 308

Query: 471 DLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVR 530
             M  K    W  MISGY +HG G EAL+ F +M  +G+ P+ +TF  +L ACSHAGLV 
Sbjct: 309 RKMEEKGVSVWTAMISGYAIHGRGREALEWFMKMQTAGVEPNQMTFTGILTACSHAGLVH 368

Query: 531 EGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGA 590
           E   +F+SM   HGFKP  EHY CMVD+LGRAG L++A E I+ + V+P  A+WGALL A
Sbjct: 369 EAKLLFESMERIHGFKPSIEHYGCMVDLLGRAGLLKEAEELIENMPVKPNAAIWGALLNA 428

Query: 591 CMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAP 650
           C IH +  L +   + L ++DP + G ++ L++I++A  ++ QAA VR+ +K++ ++K P
Sbjct: 429 CHIHGNLELGKQIGKILIQVDPGHGGRYIHLASIHAAAGEWNQAARVRRQMKEQGVSKLP 488

Query: 651 GCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKE 710
           GC++I V GT H F +GD+ HPQ   I  MLE++  ++RE G++ +    L D+E++EKE
Sbjct: 489 GCSVISVNGTAHEFLAGDESHPQIKEIDHMLEQIVERLREEGYKPKLGDLLLDLEDKEKE 548

Query: 711 LMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRF 770
             +  HSEKLA+ FGLI+T+PG  IRI+KNLRVC DCHT  K ISKV  R I++RD  RF
Sbjct: 549 TAIHHHSEKLAVTFGLISTKPGMTIRIVKNLRVCEDCHTVIKLISKVYAREILMRDRTRF 608

Query: 771 HHFKGGVCSCGDYW 784
           H FK G C+CGDYW
Sbjct: 609 HLFKDGNCTCGDYW 622



 Score =  148 bits (374), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 124/461 (26%), Positives = 213/461 (46%), Gaps = 72/461 (15%)

Query: 13  LSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLS--DFKATCYARALFFSIPKP 70
           L LL+      +L Q H Q++  G   D    +KL    +  +  +  YAR +F  I +P
Sbjct: 22  LHLLQRCSNMEELRQIHGQMLKTGLILDEIPASKLLAFCASPNSGSLAYARTVFDRIFRP 81

Query: 71  DLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDN-FTYSFVLSAASACCDRSIGVL 129
           + F++N +IRG+SN++ P+ ++  Y H+  ++   P N +T+ F+L A S+         
Sbjct: 82  NTFMWNTMIRGYSNSKEPEEALLLYHHMLYHS--VPHNAYTFPFLLKACSSMSALEETQQ 139

Query: 130 LHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCC 189
           +H H I  G+GS+++   +L+++Y K   +KSAR +FD++ ++DTV WNSMI G  K   
Sbjct: 140 IHAHIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDTVSWNSMIDGYTKCGE 199

Query: 190 FQDSIWVFGDMV-RNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLK---------- 238
            + +  +F  M  RN  +W  ++ ++  + A    + L L   +Q  G+K          
Sbjct: 200 IEMAYEIFNHMPERNIISW--TSMISGCVGAGKPKEALNLFHRMQTAGIKLDNVALVSTL 257

Query: 239 -----LGFHD-----HVYV---------LTG--LVSFYSKCGEVERAELLFRDIVRPDLI 277
                LG  D     H Y+         + G  L+  Y+KCG++E A  +FR +    + 
Sbjct: 258 QACADLGVLDQGKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAIEVFRKMEEKGVS 317

Query: 278 SCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFC 337
              AMISGY  +G+   +L  F ++  +    N  T  G+           LT C H   
Sbjct: 318 VWTAMISGYAIHGRGREALEWFMKMQTAGVEPNQMTFTGI-----------LTACSH--- 363

Query: 338 LKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAI 397
             +G+V  + +L            ME          + S+  +  M+    + GL +EA 
Sbjct: 364 --AGLVHEAKLL---------FESMERIHGF-----KPSIEHYGCMVDLLGRAGLLKEAE 407

Query: 398 SLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELV 438
            L + M    V PN     ++L+AC   G + LGK + +++
Sbjct: 408 ELIENM---PVKPNAAIWGALLNACHIHGNLELGKQIGKIL 445


>gi|297823173|ref|XP_002879469.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297325308|gb|EFH55728.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 583

 Score =  435 bits (1118), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 226/578 (39%), Positives = 347/578 (60%), Gaps = 25/578 (4%)

Query: 218 PAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLI 277
           P V ++Q++   + +   G          +LT L++       +    LLF  +  PD  
Sbjct: 20  PRVKQLQQVHAHLIVTSYGRSRS------LLTKLITLACSARAIAYTHLLFLSVPLPDDF 73

Query: 278 SCNAMISGYTCNGKTESSLRL-------FRQLLASAERVNSSTIVGLIPVFYPFGHLHLT 330
             N++I       K+ S LRL       +R++L+S    ++ T   +I        L + 
Sbjct: 74  LFNSVI-------KSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALKIG 126

Query: 331 NCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQN 390
             +H   + SG   ++ V  AL T YS+  +MEAAR++FD   EKS+ +WN++++G+ QN
Sbjct: 127 KGVHCHAVVSGFGLDTYVQAALVTFYSKCGDMEAARQVFDRMPEKSVVAWNSLVSGFEQN 186

Query: 391 GLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVS 450
           GL E+AI +F +M+ S   P+  T  S+LSACAQ GAISLG WVH+ + S   + N+ + 
Sbjct: 187 GLAEDAIRVFYQMRESGFEPDSATFVSLLSACAQTGAISLGSWVHQYIVSEGLDVNVKLG 246

Query: 451 TALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHS-GI 509
           TALI++Y++CG++ +ARE+FD M   +   W  MIS YG HG+G +A+ LF++M    G 
Sbjct: 247 TALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGKQAVDLFNKMEDDCGS 306

Query: 510 RPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKAL 569
            P+ VTF++VL AC+HAGLV +G  +++ M   +   P  EH+ C+VD+LGRAG L++A 
Sbjct: 307 IPNNVTFVAVLSACAHAGLVEDGRSVYKRMTESYRLIPGVEHHVCIVDMLGRAGFLDEAY 366

Query: 570 EFIKGLAV---EPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYS 626
            FI+ L        PA+W A+LGAC +H++ +L    +++L  L+PEN G+HV+LSNIY+
Sbjct: 367 RFIQQLDATGNATAPALWTAMLGACKMHRNYDLGVEIAKRLIALEPENPGHHVMLSNIYA 426

Query: 627 AERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNG 686
                 + + +R  + +  L K  G ++IEV    ++F+ GD+ H ++  IY  LE L  
Sbjct: 427 LSGKTDEVSHIRDRMMRNNLRKQVGYSIIEVENKTYLFSMGDESHQETGEIYRYLETLIS 486

Query: 687 KMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLD 746
           + +E G+   +   +H VEEEEKE  ++ HSEKLA+AFGL+ T   + I ++KNLR+C D
Sbjct: 487 RCKEIGYAPVSEEVMHQVEEEEKEFALRYHSEKLAVAFGLLKT-VDSAITVVKNLRICED 545

Query: 747 CHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           CH+A K+IS V+ R I+VRD  RFHHF+ G CSC DYW
Sbjct: 546 CHSAFKYISIVSNRQIIVRDKLRFHHFQNGSCSCLDYW 583



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 131/474 (27%), Positives = 227/474 (47%), Gaps = 34/474 (7%)

Query: 1   MSMKTPQSRNLFLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYA 60
           M+ K   +   + ++++      QL Q HA +I+  +    S +TKL       +A  Y 
Sbjct: 1   MTTKVAANSAAYEAIVRAGPRVKQLQQVHAHLIVTSYGRSRSLLTKLITLACSARAIAYT 60

Query: 61  RALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASA 120
             LF S+P PD FLFN +I+  S   +P   + +Y  +  +  ++P N+T++ V+ + + 
Sbjct: 61  HLLFLSVPLPDDFLFNSVIKSTSKLRLPLHCVAYYRRMLSSN-VSPSNYTFTSVIKSCAD 119

Query: 121 CCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSM 180
                IG  +H HA+VSG+G D +V AALV  Y K   +++AR+VFD+MPEK  V WNS+
Sbjct: 120 LSALKIGKGVHCHAVVSGFGLDTYVQAALVTFYSKCGDMEAARQVFDRMPEKSVVAWNSL 179

Query: 181 ISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLG 240
           +SG  +N   +D+I VF  M R  G   DS +  ++L A A+   + LG  +    +  G
Sbjct: 180 VSGFEQNGLAEDAIRVFYQM-RESGFEPDSATFVSLLSACAQTGAISLGSWVHQYIVSEG 238

Query: 241 FHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFR 300
              +V + T L++ YS+CG+V +A  +F  +   ++ +  AMIS Y  +G  + ++ LF 
Sbjct: 239 LDVNVKLGTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGKQAVDLFN 298

Query: 301 QLLASAERV-NSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRL 359
           ++      + N+ T V ++                S C  +G+V +        +VY R+
Sbjct: 299 KMEDDCGSIPNNVTFVAVL----------------SACAHAGLVEDG------RSVYKRM 336

Query: 360 NEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSIL 419
            E   + +L        +     ++    + G  +EA    Q++ A+  A  P   +++L
Sbjct: 337 TE---SYRLI-----PGVEHHVCIVDMLGRAGFLDEAYRFIQQLDATGNATAPALWTAML 388

Query: 420 SACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLM 473
            AC       LG  + + + +   E N      L ++YA  G   E   + D M
Sbjct: 389 GACKMHRNYDLGVEIAKRLIALEPE-NPGHHVMLSNIYALSGKTDEVSHIRDRM 441



 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 101/368 (27%), Positives = 183/368 (49%), Gaps = 7/368 (1%)

Query: 130 LHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCC 189
           +H H IV+ YG    +   L+ L      +     +F  +P  D  L+NS+I    K   
Sbjct: 28  VHAHLIVTSYGRSRSLLTKLITLACSARAIAYTHLLFLSVPLPDDFLFNSVIKSTSKLRL 87

Query: 190 FQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLT 249
               +  +  M+ +  +  + T   +V+ + A++  L++G  + C  +  GF    YV  
Sbjct: 88  PLHCVAYYRRMLSSNVSPSNYT-FTSVIKSCADLSALKIGKGVHCHAVVSGFGLDTYVQA 146

Query: 250 GLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERV 309
            LV+FYSKCG++E A  +F  +    +++ N+++SG+  NG  E ++R+F Q+  S    
Sbjct: 147 ALVTFYSKCGDMEAARQVFDRMPEKSVVAWNSLVSGFEQNGLAEDAIRVFYQMRESGFEP 206

Query: 310 NSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLF 369
           +S+T V L+      G + L + +H + +  G+  N  + TAL  +YSR  ++  AR++F
Sbjct: 207 DSATFVSLLSACAQTGAISLGSWVHQYIVSEGLDVNVKLGTALINLYSRCGDVGKAREVF 266

Query: 370 DESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQAS-KVAPNPVTVSSILSACAQLGAI 428
           D+  E ++A+W AMI+ Y  +G  ++A+ LF +M+      PN VT  ++LSACA  G +
Sbjct: 267 DKMKETNVAAWTAMISAYGTHGYGKQAVDLFNKMEDDCGSIPNNVTFVAVLSACAHAGLV 326

Query: 429 SLGKWVHE-LVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVT----WNT 483
             G+ V++ + +S      +     ++DM  + G + EA      +      T    W  
Sbjct: 327 EDGRSVYKRMTESYRLIPGVEHHVCIVDMLGRAGFLDEAYRFIQQLDATGNATAPALWTA 386

Query: 484 MISGYGLH 491
           M+    +H
Sbjct: 387 MLGACKMH 394


>gi|115486938|ref|NP_001065956.1| Os12g0109300 [Oryza sativa Japonica Group]
 gi|113648463|dbj|BAF28975.1| Os12g0109300 [Oryza sativa Japonica Group]
 gi|125578262|gb|EAZ19408.1| hypothetical protein OsJ_34963 [Oryza sativa Japonica Group]
          Length = 645

 Score =  434 bits (1117), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 224/559 (40%), Positives = 321/559 (57%)

Query: 226 LRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISG 285
           LR G ++    LKL  H + +VLT L++ Y++CG + RA+ +F ++  P  +S  A+I+ 
Sbjct: 87  LRAGEQLHARSLKLPSHTNPHVLTSLLTLYARCGLLHRAQRVFDEMPHPSTVSWTALITA 146

Query: 286 YTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSN 345
           Y   G    ++ + R   A+  R +S T V ++        L     +     + GI  +
Sbjct: 147 YMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARVADLATGETVWRAAEQEGIAQS 206

Query: 346 SSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQA 405
             V TA   +Y +  EM  AR++FD+  +K   +W AM+ GY  NG   EA+ LF  MQA
Sbjct: 207 VFVATAAVDLYVKCGEMAKAREVFDKMRDKDAVAWGAMVGGYASNGHPREALDLFLAMQA 266

Query: 406 SKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVE 465
             V P+   V+  LSAC +LGA+ LG+    +V    F  N  + TALIDMYAKCG+  E
Sbjct: 267 EGVRPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCGSTAE 326

Query: 466 ARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSH 525
           A  +F  M  K  + WN MI G G+ GH   A  L  +M  SG++ +  TF+ +L +C+H
Sbjct: 327 AWVVFQQMRKKDIIVWNAMILGLGMTGHEKTAFTLIGQMEKSGVKLNDNTFIGLLCSCTH 386

Query: 526 AGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWG 585
            GL+++G   F +M   +   P  EHY C+VD+L RAG L++A + I  + +     + G
Sbjct: 387 TGLIQDGRRYFHNMTKLYHISPRIEHYGCIVDLLSRAGLLQEAHQLIDDMPMPANAVILG 446

Query: 586 ALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRK 645
           ALLG C IH++  LA     +L  L+P N G +V+LSNIYS    +  AA +R  +K++ 
Sbjct: 447 ALLGGCKIHRNAELAEHVLTQLIRLEPWNSGNYVMLSNIYSNRGRWEDAAKLRLDMKEKG 506

Query: 646 LAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVE 705
           + K P C+ +E  G  H F  GD+ HP S  IY  L++L  +M+  G++  T   + DVE
Sbjct: 507 VEKVPACSWVEFEGKVHEFRVGDKSHPLSDQIYKKLDELGLEMKTMGYEPTTEVVMFDVE 566

Query: 706 EEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVR 765
           +EEKE  +  HSEKLAIAF L+ T PG  IR+ KNLRVC DCHTA K IS++T R I+VR
Sbjct: 567 DEEKEHTLVHHSEKLAIAFNLLVTGPGETIRVTKNLRVCSDCHTAIKLISRITHREIIVR 626

Query: 766 DANRFHHFKGGVCSCGDYW 784
           D NRFH F+ G CSC DYW
Sbjct: 627 DNNRFHCFRDGSCSCNDYW 645



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 104/404 (25%), Positives = 179/404 (44%), Gaps = 4/404 (0%)

Query: 105 TPDNFTYSFVLSAASACCDR-SIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSAR 163
            P + T+   L +AS        G  LH  ++     ++  V  +L+ LY +   +  A+
Sbjct: 67  NPSHLTFPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLTLYARCGLLHRAQ 126

Query: 164 KVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEV 223
           +VFD+MP   TV W ++I+  M     ++++ V  +   N G   DS +   VL A A V
Sbjct: 127 RVFDEMPHPSTVSWTALITAYMDAGDLREAVHVARNAFAN-GMRPDSFTAVRVLTACARV 185

Query: 224 QELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMI 283
            +L  G  +     + G    V+V T  V  Y KCGE+ +A  +F  +   D ++  AM+
Sbjct: 186 ADLATGETVWRAAEQEGIAQSVFVATAAVDLYVKCGEMAKAREVFDKMRDKDAVAWGAMV 245

Query: 284 SGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIV 343
            GY  NG    +L LF  + A   R +   + G +      G L L             +
Sbjct: 246 GGYASNGHPREALDLFLAMQAEGVRPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFL 305

Query: 344 SNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEM 403
            N  + TAL  +Y++      A  +F +  +K +  WNAMI G    G  + A +L  +M
Sbjct: 306 DNPVLGTALIDMYAKCGSTAEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKTAFTLIGQM 365

Query: 404 QASKVAPNPVTVSSILSACAQLGAISLG-KWVHELVKSRNFESNIYVSTALIDMYAKCGN 462
           + S V  N  T   +L +C   G I  G ++ H + K  +    I     ++D+ ++ G 
Sbjct: 366 EKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCIVDLLSRAGL 425

Query: 463 IVEARELFDLMSHKSE-VTWNTMISGYGLHGHGLEALQLFSEML 505
           + EA +L D M   +  V    ++ G  +H +   A  + ++++
Sbjct: 426 LQEAHQLIDDMPMPANAVILGALLGGCKIHRNAELAEHVLTQLI 469



 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 107/421 (25%), Positives = 185/421 (43%), Gaps = 44/421 (10%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKN---TALTPDNFTYSFVLS 116
           A+ +F  +P P    +  +I  +    M    +    H+ +N     + PD+FT   VL+
Sbjct: 125 AQRVFDEMPHPSTVSWTALITAY----MDAGDLREAVHVARNAFANGMRPDSFTAVRVLT 180

Query: 117 AASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVL 176
           A +   D + G  +   A   G    +FV  A VDLY K   +  AR+VFDKM +KD V 
Sbjct: 181 ACARVADLATGETVWRAAEQEGIAQSVFVATAAVDLYVKCGEMAKAREVFDKMRDKDAVA 240

Query: 177 WNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLG 236
           W +M+ G   N   ++++ +F  M +  G   D  +VA  L A   +  L LG +   + 
Sbjct: 241 WGAMVGGYASNGHPREALDLFLAM-QAEGVRPDCYAVAGALSACTRLGALDLGRQAIRMV 299

Query: 237 LKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSL 296
               F D+  + T L+  Y+KCG    A ++F+ + + D+I  NAMI G    G  +++ 
Sbjct: 300 DWDEFLDNPVLGTALIDMYAKCGSTAEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKTAF 359

Query: 297 RLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVY 356
            L  Q+  S  ++N +T +GL           L +C H+  ++ G     + +T L  + 
Sbjct: 360 TLIGQMEKSGVKLNDNTFIGL-----------LCSCTHTGLIQDGRRYFHN-MTKLYHIS 407

Query: 357 SRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVS 416
            R+                    +  ++   ++ GL +EA  L  +M    +  N V + 
Sbjct: 408 PRIEH------------------YGCIVDLLSRAGLLQEAHQLIDDM---PMPANAVILG 446

Query: 417 SILSACAQLGAISLGKWV-HELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSH 475
           ++L  C       L + V  +L++   + S  YV   L ++Y+  G   +A +L   M  
Sbjct: 447 ALLGGCKIHRNAELAEHVLTQLIRLEPWNSGNYV--MLSNIYSNRGRWEDAAKLRLDMKE 504

Query: 476 K 476
           K
Sbjct: 505 K 505


>gi|326495618|dbj|BAJ85905.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 788

 Score =  434 bits (1117), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 247/728 (33%), Positives = 393/728 (53%), Gaps = 25/728 (3%)

Query: 71  DLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLL 130
           D FL NV+IRG ++  +P +++             PD FT+  VL     CC R +G L 
Sbjct: 72  DAFLHNVVIRGLADAGLPGAAL-AAYAAMLAAGARPDRFTFPVVLK----CCAR-LGALD 125

Query: 131 HGHAIVSGY------GSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGL 184
            G A  S         +D++ G +L+  Y +   V  A +VFD MP +D V WNSM+ G 
Sbjct: 126 EGRAAHSAAIRLGVAAADVYTGNSLLAFYARLGLVDDAERVFDGMPARDVVTWNSMVDGY 185

Query: 185 MKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDH 244
           + N     ++  F +M        D   + A L A      L  G E+    ++ G    
Sbjct: 186 VSNGLGTLALVCFREMHEALEVQHDGVGIIAALAACCLESALMQGREVHAYVIRHGMEHD 245

Query: 245 VYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLA 304
           V V T ++  Y KCG++  AE +F  +    +++ N MI GY  N + E +   F Q+ A
Sbjct: 246 VKVGTSILDMYCKCGDIASAEGVFATMPSRTVVTWNCMIGGYALNERPEEAFDCFVQMKA 305

Query: 305 SAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEA 364
              +V   T + L+              +H +  +   + +  + TAL  +YS++ ++++
Sbjct: 306 EGHQVEVVTAINLLAACAQTESSLYGRSVHGYITRRQFLPHVVLETALLEMYSKVGKVKS 365

Query: 365 ARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQ 424
           + K+F + + K+L SWN MIA Y    +  EAI+LF ++    + P+  T+S+++ A   
Sbjct: 366 SEKVFGQMTTKTLVSWNNMIAAYMYKEMYMEAITLFLDLLNQPLYPDYFTMSAVVPAFVL 425

Query: 425 LGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTM 484
           LG +   + +H  +    +  N  +  A++ MYA+CG+++ +RE+FD M+ K  ++WNTM
Sbjct: 426 LGLLRQCRQMHSYIIRLGYGENTLIMNAIMHMYARCGDVLSSREIFDKMAAKDVISWNTM 485

Query: 485 ISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHG 544
           I GY +HG G  AL++FSEM  +G+RP+  TF+SVL ACS +GL  EG   F SM  D+G
Sbjct: 486 IMGYAIHGQGRSALEMFSEMKCNGLRPNESTFVSVLTACSVSGLTDEGWTQFNSMQRDYG 545

Query: 545 FKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVAS 604
             P  EHY CM D+LGRAG L++ ++FI+ + ++P   VWG+LL A     D ++A  A+
Sbjct: 546 MIPQIEHYGCMTDLLGRAGDLKEVMQFIENMPIDPTFRVWGSLLTASRNRNDIDIAEYAA 605

Query: 605 EKLFELDP-----ENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGG 659
           E++F+L+      +N G +VL+S++Y+    +     ++ +++++ L +    +++E+ G
Sbjct: 606 ERIFQLEQDQLEHDNTGCYVLISSMYADAGRWKDVERIKSLMEEKGLRRTDPRSIVELHG 665

Query: 660 TPHVFTSGDQLHPQSTAIYAMLEKLNGK---MREAGFQTETVTALHDVEEEEKELMMKVH 716
               F +GD  HPQS  I  +   L+GK   MR+   Q++  T+L      E       H
Sbjct: 666 ISCSFVNGDTTHPQSKMIQEVSNFLSGKIGEMRDPMNQSDP-TSLDSRRTTEP----NKH 720

Query: 717 SEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGG 776
           S +LA+ FGLI+TE  T I + KN+R+C DCH A K ISK +GR IVV D N +H F  G
Sbjct: 721 SVRLAVVFGLISTEARTPILVKKNVRICNDCHHALKLISKYSGRRIVVGDTNIYHQFSDG 780

Query: 777 VCSCGDYW 784
            C CGDYW
Sbjct: 781 SCCCGDYW 788



 Score =  165 bits (418), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 109/419 (26%), Positives = 201/419 (47%), Gaps = 10/419 (2%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           A  +F  +P  D+  +N ++ G+ +N +   ++  +  + +   +  D      +++A +
Sbjct: 163 AERVFDGMPARDVVTWNSMVDGYVSNGLGTLALVCFREMHEALEVQHDGVG---IIAALA 219

Query: 120 ACCDRSI---GVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVL 176
           ACC  S    G  +H + I  G   D+ VG +++D+Y K   + SA  VF  MP +  V 
Sbjct: 220 ACCLESALMQGREVHAYVIRHGMEHDVKVGTSILDMYCKCGDIASAEGVFATMPSRTVVT 279

Query: 177 WNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLG 236
           WN MI G   N   +++   F  M +  G  ++  +   +L A A+ +    G  +    
Sbjct: 280 WNCMIGGYALNERPEEAFDCFVQM-KAEGHQVEVVTAINLLAACAQTESSLYGRSVHGYI 338

Query: 237 LKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSL 296
            +  F  HV + T L+  YSK G+V+ +E +F  +    L+S N MI+ Y        ++
Sbjct: 339 TRRQFLPHVVLETALLEMYSKVGKVKSSEKVFGQMTTKTLVSWNNMIAAYMYKEMYMEAI 398

Query: 297 RLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVY 356
            LF  LL      +  T+  ++P F   G L     +HS+ ++ G   N+ ++ A+  +Y
Sbjct: 399 TLFLDLLNQPLYPDYFTMSAVVPAFVLLGLLRQCRQMHSYIIRLGYGENTLIMNAIMHMY 458

Query: 357 SRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVS 416
           +R  ++ ++R++FD+ + K + SWN MI GY  +G    A+ +F EM+ + + PN  T  
Sbjct: 459 ARCGDVLSSREIFDKMAAKDVISWNTMIMGYAIHGQGRSALEMFSEMKCNGLRPNESTFV 518

Query: 417 SILSACAQLGAISLGKWVHELVKSRNFE--SNIYVSTALIDMYAKCGNIVEARELFDLM 473
           S+L+AC+  G    G W       R++     I     + D+  + G++ E  +  + M
Sbjct: 519 SVLTACSVSGLTDEG-WTQFNSMQRDYGMIPQIEHYGCMTDLLGRAGDLKEVMQFIENM 576



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 78/296 (26%), Positives = 151/296 (51%), Gaps = 4/296 (1%)

Query: 24  QLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFS 83
           Q  + HA +I HG ++D+   T +            A  +F ++P   +  +N +I G++
Sbjct: 229 QGREVHAYVIRHGMEHDVKVGTSILDMYCKCGDIASAEGVFATMPSRTVVTWNCMIGGYA 288

Query: 84  NNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSI-GVLLHGHAIVSGYGSD 142
            NE P+ +   +  ++            +  L AA A  + S+ G  +HG+     +   
Sbjct: 289 LNERPEEAFDCFVQMKAEGHQV--EVVTAINLLAACAQTESSLYGRSVHGYITRRQFLPH 346

Query: 143 LFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVR 202
           + +  AL+++Y K   VKS+ KVF +M  K  V WN+MI+  M    + ++I +F D++ 
Sbjct: 347 VVLETALLEMYSKVGKVKSSEKVFGQMTTKTLVSWNNMIAAYMYKEMYMEAITLFLDLL- 405

Query: 203 NGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVE 262
           N   + D  +++AV+PA   +  LR   ++    ++LG+ ++  ++  ++  Y++CG+V 
Sbjct: 406 NQPLYPDYFTMSAVVPAFVLLGLLRQCRQMHSYIIRLGYGENTLIMNAIMHMYARCGDVL 465

Query: 263 RAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLI 318
            +  +F  +   D+IS N MI GY  +G+  S+L +F ++  +  R N ST V ++
Sbjct: 466 SSREIFDKMAAKDVISWNTMIMGYAIHGQGRSALEMFSEMKCNGLRPNESTFVSVL 521


>gi|357119550|ref|XP_003561500.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
           chloroplastic-like [Brachypodium distachyon]
          Length = 892

 Score =  434 bits (1117), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 225/563 (39%), Positives = 322/563 (57%), Gaps = 36/563 (6%)

Query: 255 YSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTI 314
           Y+  G ++ +  L R    P  I   + I  ++  G    +L L   +LA      + T+
Sbjct: 333 YAASGRLDLSLALLRRTRDPTAIFYTSAIHAHSSRGHRLPALALLSDMLAQGLLPTAHTL 392

Query: 315 VGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDES-- 372
              +P       L     +H +  K  +  +S V TAL  +Y+R  +  AAR LFD+   
Sbjct: 393 SASLPACR---GLSPGRALHGYAFKLALAGDSYVATALLGMYARAGDATAARALFDDMLP 449

Query: 373 ------------------------------SEKSLASWNAMIAGYTQNGLTEEAISLFQE 402
                                           K    WNAMI GYTQ+G   EA+ LF+ 
Sbjct: 450 DPHVVSVTAMLTCYADMGALDDARSLFDGLPTKDFVCWNAMIDGYTQHGRPNEALRLFRR 509

Query: 403 MQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVK-SRNFESNIYVSTALIDMYAKCG 461
           M  S V P+ VTV  +LSA AQLG +  GKW+H  VK SR  + ++ V TALIDMY KCG
Sbjct: 510 MLGSGVEPDEVTVVLVLSAVAQLGTVESGKWLHSYVKNSRRVQLSVRVGTALIDMYCKCG 569

Query: 462 NIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLY 521
           ++ +A ++F  +  K  V WN MI+GY +HG   +AL++F +    G+ P+ +TF+ +L 
Sbjct: 570 SLGDAVDVFHGIGDKDIVVWNAMINGYAMHGDSRKALEMFVQSREQGLWPTDITFIGLLN 629

Query: 522 ACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGP 581
           ACSH+G+V EG E FQSM  ++G  P  EHY CMVD+LGRAG +++A   ++ + + P  
Sbjct: 630 ACSHSGMVEEGREFFQSMEREYGIDPKIEHYGCMVDLLGRAGLIKEAFCLVQSMKITPDA 689

Query: 582 AVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVV 641
            +W +LL AC +HK+ +L +  ++ L      N G ++LLSNIY+A  ++ + A VR ++
Sbjct: 690 VMWVSLLAACRLHKNMSLGQQIADYLVAKGLANSGMYILLSNIYAAVGNWGEVARVRSMM 749

Query: 642 KKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTAL 701
           K   + K PGC+ IE+    + F +GD  HP++  IY ML+K+NG ++E G   +T   L
Sbjct: 750 KASGIQKEPGCSSIEIDREVYEFVAGDMSHPRTDEIYVMLDKMNGLVKEHGHVPQTELVL 809

Query: 702 HDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRV 761
           HD++E  KE  + VHSEKLA+AFGLI+T+PG  I+I+KNLR C DCH   K IS++TGR 
Sbjct: 810 HDLDEATKEKALAVHSEKLALAFGLISTQPGATIKIVKNLRACSDCHAVLKLISRITGRK 869

Query: 762 IVVRDANRFHHFKGGVCSCGDYW 784
           IV RD NRFHHF  G CSCGDYW
Sbjct: 870 IVFRDRNRFHHFVDGSCSCGDYW 892



 Score =  112 bits (280), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 77/283 (27%), Positives = 138/283 (48%), Gaps = 4/283 (1%)

Query: 244 HVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLL 303
           HV  +T +++ Y+  G ++ A  LF  +   D +  NAMI GYT +G+   +LRLFR++L
Sbjct: 452 HVVSVTAMLTCYADMGALDDARSLFDGLPTKDFVCWNAMIDGYTQHGRPNEALRLFRRML 511

Query: 304 ASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNS-SVLTALSTVYSRLNEM 362
            S    +  T+V ++      G +     +HS+   S  V  S  V TAL  +Y +   +
Sbjct: 512 GSGVEPDEVTVVLVLSAVAQLGTVESGKWLHSYVKNSRRVQLSVRVGTALIDMYCKCGSL 571

Query: 363 EAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSAC 422
             A  +F    +K +  WNAMI GY  +G + +A+ +F + +   + P  +T   +L+AC
Sbjct: 572 GDAVDVFHGIGDKDIVVWNAMINGYAMHGDSRKALEMFVQSREQGLWPTDITFIGLLNAC 631

Query: 423 AQLGAISLGK-WVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSE-VT 480
           +  G +  G+ +   + +    +  I     ++D+  + G I EA  L   M    + V 
Sbjct: 632 SHSGMVEEGREFFQSMEREYGIDPKIEHYGCMVDLLGRAGLIKEAFCLVQSMKITPDAVM 691

Query: 481 WNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGV-TFLSVLYA 522
           W ++++   LH +     Q+   ++  G+  SG+   LS +YA
Sbjct: 692 WVSLLAACRLHKNMSLGQQIADYLVAKGLANSGMYILLSNIYA 734



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 77/302 (25%), Positives = 130/302 (43%), Gaps = 38/302 (12%)

Query: 333 IHSFCLKSGIV--SNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQN 390
           +H+  L++G++  ++ +V   L   Y+    ++ +  L   + + +   + + I  ++  
Sbjct: 308 LHAAVLRTGLLDATDRAVAFRLQRAYAASGRLDLSLALLRRTRDPTAIFYTSAIHAHSSR 367

Query: 391 GLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVS 450
           G    A++L  +M A  + P   T+S+ L AC  L   S G+ +H          + YV+
Sbjct: 368 GHRLPALALLSDMLAQGLLPTAHTLSASLPACRGL---SPGRALHGYAFKLALAGDSYVA 424

Query: 451 TALIDMYAKCGNIVEARELFDLM--------------------------------SHKSE 478
           TAL+ MYA+ G+   AR LFD M                                  K  
Sbjct: 425 TALLGMYARAGDATAARALFDDMLPDPHVVSVTAMLTCYADMGALDDARSLFDGLPTKDF 484

Query: 479 VTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQS 538
           V WN MI GY  HG   EAL+LF  ML SG+ P  VT + VL A +  G V  G  +   
Sbjct: 485 VCWNAMIDGYTQHGRPNEALRLFRRMLGSGVEPDEVTVVLVLSAVAQLGTVESGKWLHSY 544

Query: 539 MIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTN 598
           + +    +        ++D+  + G L  A++   G+  +    VW A++    +H D+ 
Sbjct: 545 VKNSRRVQLSVRVGTALIDMYCKCGSLGDAVDVFHGIG-DKDIVVWNAMINGYAMHGDSR 603

Query: 599 LA 600
            A
Sbjct: 604 KA 605



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 59/238 (24%), Positives = 106/238 (44%), Gaps = 5/238 (2%)

Query: 43  TVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNT 102
           +VT +    +D  A   AR+LF  +P  D   +N +I G++ +  P  ++  +  +   +
Sbjct: 455 SVTAMLTCYADMGALDDARSLFDGLPTKDFVCWNAMIDGYTQHGRPNEALRLFRRM-LGS 513

Query: 103 ALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGS-DLFVGAALVDLYFKFSWVKS 161
            + PD  T   VLSA +       G  LH +   S      + VG AL+D+Y K   +  
Sbjct: 514 GVEPDEVTVVLVLSAVAQLGTVESGKWLHSYVKNSRRVQLSVRVGTALIDMYCKCGSLGD 573

Query: 162 ARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVA 221
           A  VF  + +KD V+WN+MI+G   +   + ++ +F    R  G W    +   +L A +
Sbjct: 574 AVDVFHGIGDKDIVVWNAMINGYAMHGDSRKALEMFVQ-SREQGLWPTDITFIGLLNACS 632

Query: 222 EVQELRLGME-IQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDI-VRPDLI 277
               +  G E  Q +  + G    +     +V    + G ++ A  L + + + PD +
Sbjct: 633 HSGMVEEGREFFQSMEREYGIDPKIEHYGCMVDLLGRAGLIKEAFCLVQSMKITPDAV 690


>gi|357127001|ref|XP_003565175.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18485-like [Brachypodium distachyon]
          Length = 849

 Score =  434 bits (1117), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 250/735 (34%), Positives = 404/735 (54%), Gaps = 13/735 (1%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALT--PDNFTYSFVLSA 117
           A  +F  +   +L  +N ++   ++   P+  +  +    ++   T  PD  T   VL  
Sbjct: 118 AEKVFEGMAGRNLVSWNALMAAVAD---PRRGLELFRDCLEDLGGTAAPDEATLVTVLPM 174

Query: 118 ASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPE---KDT 174
            +A      G  +HG A+ SG+ +   V   LVD+Y K   +  A   F + P    ++ 
Sbjct: 175 CAALAWPETGRAVHGLAVKSGWDAAPRVSNVLVDMYAKCGEMADAECAFLEAPPGAGRNV 234

Query: 175 VLWNSMISGLMKNCCFQDSIWVFGDM-VRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQ 233
           V WN M+ G  +N     +  +  +M +   G   D  ++ +VLP  + + EL    E+ 
Sbjct: 235 VSWNVMLGGYARNGEAGAAFGLLREMQMEERGVPADEITMLSVLPVCSGLPELAKLRELH 294

Query: 234 CLGLKLGFH-DHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKT 292
              ++ G H     V   L++ Y +CG +  A  +F  I    + S NA+I  +  NG+ 
Sbjct: 295 AFVVRRGLHLTGDMVPNALIAAYGRCGCLLHACRVFDGICSKMVSSWNALIGAHAQNGEA 354

Query: 293 ESSLRLFRQLL-ASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTA 351
            +++ LFR++  A  ++ +  +I  L+       HL      H F L++G+  +S +  +
Sbjct: 355 SAAIELFREMTNACGQKPDWFSIGSLLLACGNLKHLLHGKAAHGFILRNGLEKDSFIRVS 414

Query: 352 LSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVA-- 409
           L +VY +      AR LFD   EK   SWN MIAGY+QNGL  E++ LF+EMQ+ K    
Sbjct: 415 LLSVYIQCGRESLARVLFDAVEEKDEVSWNTMIAGYSQNGLPGESLQLFREMQSKKGGHW 474

Query: 410 PNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEAREL 469
           P+ +  +S L AC++L A+ LGK +H      +   + ++S+++IDMY+KCG++ +AR  
Sbjct: 475 PSLLAATSALVACSELPAVRLGKEMHCFALKADLCEDSFLSSSIIDMYSKCGSVDDARVF 534

Query: 470 FDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLV 529
           FD +  K  V+W  MI+GY ++G G EA+ L+ +M   G+ P G T+L +L AC HAG++
Sbjct: 535 FDRLKAKDAVSWTVMITGYAVNGRGKEAVGLYDKMGREGMEPDGFTYLGLLMACGHAGML 594

Query: 530 REGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLG 589
            +G   FQ M +    +   EHYAC++ +L RAG+   A+  ++ +  EP   +  ++L 
Sbjct: 595 EDGLCFFQEMRNLPKIEAKLEHYACVIGMLSRAGRFADAVALMEVMPEEPDAKILSSVLS 654

Query: 590 ACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKA 649
           AC +H +  L +  ++KL EL+P    ++VL SN+Y+  R + +   VR++++   +AK 
Sbjct: 655 ACHMHGEVELGKKVADKLLELEPHKAEHYVLASNMYAGSRQWDEMRKVRKMLRDAGVAKE 714

Query: 650 PGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEK 709
           PGC+ I++ G  + F +G+   P+   +  M   L  K+R AG+  +T   LH++EEEEK
Sbjct: 715 PGCSWIDIAGKVYSFVAGENSLPEMHKVRKMWYSLEEKIRAAGYAPDTTVMLHELEEEEK 774

Query: 710 ELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANR 769
              ++ HSEK AIAFGL+ T   T++R+ KN+R+C DCH A K ISKV  R IVVRD  R
Sbjct: 775 VEALRWHSEKQAIAFGLLRTAGPTKVRVFKNIRMCKDCHNAAKLISKVADREIVVRDKKR 834

Query: 770 FHHFKGGVCSCGDYW 784
           FHHF+ G+CSCGDYW
Sbjct: 835 FHHFRDGLCSCGDYW 849



 Score =  199 bits (507), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 141/452 (31%), Positives = 221/452 (48%), Gaps = 23/452 (5%)

Query: 98  LRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYG---SDLFVGAALVDLYF 154
           L  +  + PD FT    L +      R +      HA+ +  G    D FVG +LV +Y 
Sbjct: 57  LAASDGVAPDRFTLPPALKSCRGDDGRQV------HAVAAKLGLADGDPFVGNSLVSMYG 110

Query: 155 KFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRN-GGTWL-DSTS 212
           +   V  A KVF+ M  ++ V WN++++ +      +  + +F D + + GGT   D  +
Sbjct: 111 RCGRVDDAEKVFEGMAGRNLVSWNALMAAVADP---RRGLELFRDCLEDLGGTAAPDEAT 167

Query: 213 VAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDI- 271
           +  VLP  A +     G  +  L +K G+     V   LV  Y+KCGE+  AE  F +  
Sbjct: 168 LVTVLPMCAALAWPETGRAVHGLAVKSGWDAAPRVSNVLVDMYAKCGEMADAECAFLEAP 227

Query: 272 --VRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSS--TIVGLIPVFYPFGHL 327
                +++S N M+ GY  NG+  ++  L R++      V +   T++ ++PV      L
Sbjct: 228 PGAGRNVVSWNVMLGGYARNGEAGAAFGLLREMQMEERGVPADEITMLSVLPVCSGLPEL 287

Query: 328 HLTNCIHSFCLKSGI-VSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAG 386
                +H+F ++ G+ ++   V  AL   Y R   +  A ++FD    K ++SWNA+I  
Sbjct: 288 AKLRELHAFVVRRGLHLTGDMVPNALIAAYGRCGCLLHACRVFDGICSKMVSSWNALIGA 347

Query: 387 YTQNGLTEEAISLFQEM-QASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFES 445
           + QNG    AI LF+EM  A    P+  ++ S+L AC  L  +  GK  H  +     E 
Sbjct: 348 HAQNGEASAAIELFREMTNACGQKPDWFSIGSLLLACGNLKHLLHGKAAHGFILRNGLEK 407

Query: 446 NIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEML 505
           + ++  +L+ +Y +CG    AR LFD +  K EV+WNTMI+GY  +G   E+LQLF EM 
Sbjct: 408 DSFIRVSLLSVYIQCGRESLARVLFDAVEEKDEVSWNTMIAGYSQNGLPGESLQLFREMQ 467

Query: 506 --HSGIRPSGVTFLSVLYACSHAGLVREGDEI 535
               G  PS +   S L ACS    VR G E+
Sbjct: 468 SKKGGHWPSLLAATSALVACSELPAVRLGKEM 499



 Score =  103 bits (256), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 94/358 (26%), Positives = 153/358 (42%), Gaps = 54/358 (15%)

Query: 280 NAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNC------- 332
           N +++  +  G+   +L +  +LLA+++ V       L P         L +C       
Sbjct: 34  NGLLADLSRAGRHADALAILPRLLAASDGVAPDRFT-LPPA--------LKSCRGDDGRQ 84

Query: 333 IHSFCLKSGIVSNSS-VLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNG 391
           +H+   K G+      V  +L ++Y R   ++ A K+F+  + ++L SWNA++A      
Sbjct: 85  VHAVAAKLGLADGDPFVGNSLVSMYGRCGRVDDAEKVFEGMAGRNLVSWNALMAAVAD-- 142

Query: 392 LTEEAISLFQ---EMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIY 448
                + LF+   E      AP+  T+ ++L  CA L     G+ VH L     +++   
Sbjct: 143 -PRRGLELFRDCLEDLGGTAAPDEATLVTVLPMCAALAWPETGRAVHGLAVKSGWDAAPR 201

Query: 449 VSTALIDMYAKCGNIVEARELF---DLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEML 505
           VS  L+DMYAKCG + +A   F      + ++ V+WN M+ GY  +G    A  L  EM 
Sbjct: 202 VSNVLVDMYAKCGEMADAECAFLEAPPGAGRNVVSWNVMLGGYARNGEAGAAFGLLREMQ 261

Query: 506 --HSGIRPSGVTFLSVLYACS-----------HAGLVREGDEIFQSMIHDHGFKPLAEHY 552
               G+    +T LSVL  CS           HA +VR G  +   M+ +          
Sbjct: 262 MEERGVPADEITMLSVLPVCSGLPELAKLRELHAFVVRRGLHLTGDMVPN---------- 311

Query: 553 ACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFEL 610
             ++   GR G L  A     G+  +   + W AL+GA   H     A  A E   E+
Sbjct: 312 -ALIAAYGRCGCLLHACRVFDGICSKM-VSSWNALIGA---HAQNGEASAAIELFREM 364



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 45/196 (22%), Positives = 90/196 (45%), Gaps = 8/196 (4%)

Query: 376 SLASWNAMIAGYTQNGLTEEAISLFQEMQASK--VAPNPVTVSSILSACAQLGAISLGKW 433
           SL  WN ++A  ++ G   +A+++   + A+   VAP+  T+   L +C        G+ 
Sbjct: 29  SLPQWNGLLADLSRAGRHADALAILPRLLAASDGVAPDRFTLPPALKSCRG----DDGRQ 84

Query: 434 VHELVKSRNF-ESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHG 492
           VH +       + + +V  +L+ MY +CG + +A ++F+ M+ ++ V+WN +++      
Sbjct: 85  VHAVAAKLGLADGDPFVGNSLVSMYGRCGRVDDAEKVFEGMAGRNLVSWNALMAAVADPR 144

Query: 493 HGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHY 552
            GLE  +   E L     P   T ++VL  C+       G  +   +    G+       
Sbjct: 145 RGLELFRDCLEDLGGTAAPDEATLVTVLPMCAALAWPETGRAV-HGLAVKSGWDAAPRVS 203

Query: 553 ACMVDILGRAGQLEKA 568
             +VD+  + G++  A
Sbjct: 204 NVLVDMYAKCGEMADA 219


>gi|225424252|ref|XP_002280792.1| PREDICTED: pentatricopeptide repeat-containing protein At2g01510,
           mitochondrial [Vitis vinifera]
 gi|297737690|emb|CBI26891.3| unnamed protein product [Vitis vinifera]
          Length = 610

 Score =  434 bits (1116), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 219/528 (41%), Positives = 317/528 (60%), Gaps = 2/528 (0%)

Query: 259 GEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLI 318
           G++  A  LF ++ +P     N ++ GY  NG  + ++ ++ ++     R +  T   +I
Sbjct: 83  GDMSYARQLFDEMHKPRPFLWNTIMKGYVKNGIPDKAVSVYGKMRHLGVRPDPFTFPFVI 142

Query: 319 PVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLA 378
                   L     +H   +K G+   ++V T L  +Y +  E+  A  LF    E+ L 
Sbjct: 143 KACAELAELWAGLGMHGHVVKHGLEFVAAVRTELMIMYVKFGELGCAEFLFGSMVERDLV 202

Query: 379 SWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELV 438
           +WNA+IA   Q G + +A+  F+EM  + + P+ VT+ S LSAC  LG +  G+ ++E  
Sbjct: 203 AWNALIAVCVQTGFSSKALQSFREMGMAGIKPDSVTIVSALSACGHLGCLETGEEIYEFA 262

Query: 439 KSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEAL 498
           +    +SNI V  A +DM AKCG++ +A  LFD M  ++ ++W+T+I GY ++G   +AL
Sbjct: 263 REEGIDSNIIVHNARLDMCAKCGDMDKAMNLFDEMPQRNVISWSTVIGGYAVNGESEKAL 322

Query: 499 QLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIH--DHGFKPLAEHYACMV 556
            LFS M + G++P+ VTFL+VL ACSH G V EG + F  M    D   +P  EHYACMV
Sbjct: 323 ALFSRMKNQGVQPNYVTFLAVLSACSHTGRVNEGWQYFNFMAQSDDKNIQPRKEHYACMV 382

Query: 557 DILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVG 616
           D+LGR+G LE+A  FIK + +E  P +WGALLGAC IH++  L +  ++ LFEL PE   
Sbjct: 383 DLLGRSGHLEEAYNFIKIMPIEADPGIWGALLGACAIHQNIKLGQHVADLLFELAPEIAS 442

Query: 617 YHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTA 676
           YHVLLSN+Y+A   +     VRQ +KK+   K    + +E  G  H+   GD+ HPQS +
Sbjct: 443 YHVLLSNMYAAAGRWHCVEKVRQRMKKKGARKVAAYSSVEFNGEIHILYGGDKSHPQSAS 502

Query: 677 IYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIR 736
           I A LE L  +M+  G+  ET +  HDVE+EEKE  +  HSEKLAIAF LI   P   IR
Sbjct: 503 ILAKLEDLLKQMKSMGYIPETDSVFHDVEDEEKESTLSTHSEKLAIAFSLINGSPKFPIR 562

Query: 737 IIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           ++KNLR+C DCHT  K +S++T R I++RD NRFHHFK G+CSC D+W
Sbjct: 563 VMKNLRICGDCHTFCKLVSRITMREIIMRDKNRFHHFKNGICSCKDFW 610



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 100/335 (29%), Positives = 175/335 (52%), Gaps = 7/335 (2%)

Query: 162 ARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVA 221
           AR++FD+M +    LWN+++ G +KN     ++ V+G M R+ G   D  +   V+ A A
Sbjct: 88  ARQLFDEMHKPRPFLWNTIMKGYVKNGIPDKAVSVYGKM-RHLGVRPDPFTFPFVIKACA 146

Query: 222 EVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNA 281
           E+ EL  G+ +    +K G      V T L+  Y K GE+  AE LF  +V  DL++ NA
Sbjct: 147 ELAELWAGLGMHGHVVKHGLEFVAAVRTELMIMYVKFGELGCAEFLFGSMVERDLVAWNA 206

Query: 282 MISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSG 341
           +I+     G +  +L+ FR++  +  + +S TIV  +      G L     I+ F  + G
Sbjct: 207 LIAVCVQTGFSSKALQSFREMGMAGIKPDSVTIVSALSACGHLGCLETGEEIYEFAREEG 266

Query: 342 IVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQ 401
           I SN  V  A   + ++  +M+ A  LFDE  ++++ SW+ +I GY  NG +E+A++LF 
Sbjct: 267 IDSNIIVHNARLDMCAKCGDMDKAMNLFDEMPQRNVISWSTVIGGYAVNGESEKALALFS 326

Query: 402 EMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVS----TALIDMY 457
            M+   V PN VT  ++LSAC+  G ++ G W +    +++ + NI         ++D+ 
Sbjct: 327 RMKNQGVQPNYVTFLAVLSACSHTGRVNEG-WQYFNFMAQSDDKNIQPRKEHYACMVDLL 385

Query: 458 AKCGNIVEARELFDLMSHKSEV-TWNTMISGYGLH 491
            + G++ EA     +M  +++   W  ++    +H
Sbjct: 386 GRSGHLEEAYNFIKIMPIEADPGIWGALLGACAIH 420



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 105/407 (25%), Positives = 185/407 (45%), Gaps = 42/407 (10%)

Query: 59  YARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAA 118
           YAR LF  + KP  FL+N I++G+  N +P  ++  Y  +R +  + PD FT+ FV+ A 
Sbjct: 87  YARQLFDEMHKPRPFLWNTIMKGYVKNGIPDKAVSVYGKMR-HLGVRPDPFTFPFVIKAC 145

Query: 119 SACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWN 178
           +   +   G+ +HGH +  G      V   L+ +Y KF  +  A  +F  M E+D V WN
Sbjct: 146 AELAELWAGLGMHGHVVKHGLEFVAAVRTELMIMYVKFGELGCAEFLFGSMVERDLVAWN 205

Query: 179 SMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLK 238
           ++I+  ++      ++  F +M    G   DS ++ + L A   +  L  G EI     +
Sbjct: 206 ALIAVCVQTGFSSKALQSFREMGM-AGIKPDSVTIVSALSACGHLGCLETGEEIYEFARE 264

Query: 239 LGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRL 298
            G   ++ V    +   +KCG++++A  LF ++ + ++IS + +I GY  NG++E +L L
Sbjct: 265 EGIDSNIIVHNARLDMCAKCGDMDKAMNLFDEMPQRNVISWSTVIGGYAVNGESEKALAL 324

Query: 299 FRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSR 358
           F ++     + N  T + +           L+ C H+                      R
Sbjct: 325 FSRMKNQGVQPNYVTFLAV-----------LSACSHT---------------------GR 352

Query: 359 LNEMEAARKLFDESSEKSLAS----WNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVT 414
           +NE         +S +K++      +  M+    ++G  EEA +  + M    +  +P  
Sbjct: 353 VNEGWQYFNFMAQSDDKNIQPRKEHYACMVDLLGRSGHLEEAYNFIKIM---PIEADPGI 409

Query: 415 VSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCG 461
             ++L ACA    I LG+ V +L+     E   Y    L +MYA  G
Sbjct: 410 WGALLGACAIHQNIKLGQHVADLLFELAPEIASY-HVLLSNMYAAAG 455


>gi|297611064|ref|NP_001065554.2| Os11g0109600 [Oryza sativa Japonica Group]
 gi|255679703|dbj|BAF27399.2| Os11g0109600 [Oryza sativa Japonica Group]
          Length = 1124

 Score =  434 bits (1116), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 224/559 (40%), Positives = 321/559 (57%)

Query: 226  LRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISG 285
            LR G ++    LKL  H + +VLT L+S Y+KCG + RA+ +F ++  P  +   A+I+ 
Sbjct: 566  LRAGEQLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRAQRVFDEMPHPSTVPWTALITA 625

Query: 286  YTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSN 345
            Y   G    ++ + R   A+  R +S T V ++        L     +     + G+  +
Sbjct: 626  YMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARIADLATGETVWRAAEQEGVAQS 685

Query: 346  SSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQA 405
              V TA   +Y +  EM  AR++FD+   K   +W AM+ GY  NG   EA+ LF  MQA
Sbjct: 686  VFVATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAMVGGYASNGHPREALDLFLAMQA 745

Query: 406  SKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVE 465
              + P+   V+  LSAC +LGA+ LG+    +V    F  N  + TALIDMYAKCG+ VE
Sbjct: 746  EGMKPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCGSTVE 805

Query: 466  ARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSH 525
            A  +F  M  K  + WN MI G G+ GH   A  L  +M  SG++ +  TF+ +L +C+H
Sbjct: 806  AWVVFQQMRKKDIIVWNAMILGLGMTGHEKIAFALVGQMEKSGVKLNDNTFIGLLCSCTH 865

Query: 526  AGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWG 585
             GL+++G   F +M   +   P  EHY CMVD+L RAG L++A + +  + +     + G
Sbjct: 866  TGLIQDGRRYFHNMTKLYHISPRIEHYGCMVDLLSRAGLLQEAHQLVDDMPMPANAVILG 925

Query: 586  ALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRK 645
            ALLG C IH++T LA    ++L  L+P N G +V+LSNIYS    +  AA +R  +K + 
Sbjct: 926  ALLGGCKIHRNTELAEHVLKQLILLEPWNSGNYVMLSNIYSNRGRWEDAAKLRLDMKAKG 985

Query: 646  LAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVE 705
            + K P C+ +E  G  H F  GD+ HP S  IY  L++L  +M+  G++  T   + DVE
Sbjct: 986  VEKVPACSWVEFEGKVHEFRVGDKSHPLSDQIYKKLDELGLEMKTMGYEPTTEVVMFDVE 1045

Query: 706  EEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVR 765
            +EEKE  +  HSEKLAIAF L+ T PG  IR+ KNLRVC DCHTA K +S++T R I+VR
Sbjct: 1046 DEEKEHTLVHHSEKLAIAFNLLITGPGETIRVTKNLRVCSDCHTAIKLVSRITHREIIVR 1105

Query: 766  DANRFHHFKGGVCSCGDYW 784
            D NRFH F+ G CSC DYW
Sbjct: 1106 DNNRFHCFRDGSCSCNDYW 1124



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 102/390 (26%), Positives = 171/390 (43%), Gaps = 4/390 (1%)

Query: 105 TPDNFTYSFVLSAASACCDR-SIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSAR 163
            P + T    L +AS        G  LH  ++     ++  V  +L+ LY K   +  A+
Sbjct: 546 NPSHLTIPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRAQ 605

Query: 164 KVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEV 223
           +VFD+MP   TV W ++I+  M     ++++ V  +   NG    DS +   VL A A +
Sbjct: 606 RVFDEMPHPSTVPWTALITAYMDAGDLREAVHVARNAFANGMR-PDSFTAVRVLTACARI 664

Query: 224 QELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMI 283
            +L  G  +     + G    V+V T  V  Y KCGE+ +A  +F  +   D ++  AM+
Sbjct: 665 ADLATGETVWRAAEQEGVAQSVFVATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAMV 724

Query: 284 SGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIV 343
            GY  NG    +L LF  + A   + +   + G +      G L L             +
Sbjct: 725 GGYASNGHPREALDLFLAMQAEGMKPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFL 784

Query: 344 SNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEM 403
            N  + TAL  +Y++      A  +F +  +K +  WNAMI G    G  + A +L  +M
Sbjct: 785 DNPVLGTALIDMYAKCGSTVEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKIAFALVGQM 844

Query: 404 QASKVAPNPVTVSSILSACAQLGAISLG-KWVHELVKSRNFESNIYVSTALIDMYAKCGN 462
           + S V  N  T   +L +C   G I  G ++ H + K  +    I     ++D+ ++ G 
Sbjct: 845 EKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCMVDLLSRAGL 904

Query: 463 IVEARELFDLMSHKSE-VTWNTMISGYGLH 491
           + EA +L D M   +  V    ++ G  +H
Sbjct: 905 LQEAHQLVDDMPMPANAVILGALLGGCKIH 934



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 105/414 (25%), Positives = 182/414 (43%), Gaps = 44/414 (10%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKN---TALTPDNFTYSFVLS 116
           A+ +F  +P P    +  +I  + +    + ++    H+ +N     + PD+FT   VL+
Sbjct: 604 AQRVFDEMPHPSTVPWTALITAYMDAGDLREAV----HVARNAFANGMRPDSFTAVRVLT 659

Query: 117 AASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVL 176
           A +   D + G  +   A   G    +FV  A VDLY K   +  AR+VFDKM  KD V 
Sbjct: 660 ACARIADLATGETVWRAAEQEGVAQSVFVATAAVDLYVKCGEMAKAREVFDKMRHKDAVA 719

Query: 177 WNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLG 236
           W +M+ G   N   ++++ +F  M +  G   D  +VA  L A   +  L LG +   + 
Sbjct: 720 WGAMVGGYASNGHPREALDLFLAM-QAEGMKPDCYAVAGALSACTRLGALDLGRQAIRMV 778

Query: 237 LKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSL 296
               F D+  + T L+  Y+KCG    A ++F+ + + D+I  NAMI G    G  + + 
Sbjct: 779 DWDEFLDNPVLGTALIDMYAKCGSTVEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKIAF 838

Query: 297 RLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVY 356
            L  Q+  S  ++N +T +GL           L +C H+  ++ G     + +T L  + 
Sbjct: 839 ALVGQMEKSGVKLNDNTFIGL-----------LCSCTHTGLIQDGRRYFHN-MTKLYHIS 886

Query: 357 SRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVS 416
            R+                    +  M+   ++ GL +EA  L  +M    +  N V + 
Sbjct: 887 PRIEH------------------YGCMVDLLSRAGLLQEAHQLVDDM---PMPANAVILG 925

Query: 417 SILSACAQLGAISLGKWV-HELVKSRNFESNIYVSTALIDMYAKCGNIVEAREL 469
           ++L  C       L + V  +L+    + S  YV   L ++Y+  G   +A +L
Sbjct: 926 ALLGGCKIHRNTELAEHVLKQLILLEPWNSGNYV--MLSNIYSNRGRWEDAAKL 977


>gi|326532272|dbj|BAK05065.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 889

 Score =  434 bits (1116), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 273/844 (32%), Positives = 430/844 (50%), Gaps = 99/844 (11%)

Query: 6   PQSRNLFLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFF 65
           P +R L    L+G  T+  +  TH  I+++G+        KL   LSD      A  LF 
Sbjct: 80  PDARGL----LRGDITEPNVI-TH-NIMMNGY-------AKLG-SLSD------AEELFG 119

Query: 66  SIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRS 125
            +P+ D+  +N ++ G+  +     ++  +  +R++    P+ FT+   + +  A     
Sbjct: 120 RMPRRDVTSWNTLMSGYYQSGRFLDAMESFVSMRRSGDSLPNAFTFGCAMKSCGALGWHE 179

Query: 126 IGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARK--------------------- 164
           + + L G     G+  D  V   +VD++ +   V  A K                     
Sbjct: 180 VALQLLGLLTKFGFQGDPDVATGIVDMFVRCGAVDFASKQFSQIERPTVFCRNSMLAGYA 239

Query: 165 ----------VFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVA 214
                     +F+ MPE+D V WN M+S L ++   ++++ V  DM  N G  LDST+  
Sbjct: 240 KSYGVDHALELFESMPERDVVSWNMMVSALSQSGRAREALSVAVDM-HNRGVRLDSTTYT 298

Query: 215 AVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRP 274
           + L A A++  L  G ++    ++       YV + +V  Y+KCG  + A  +F  +   
Sbjct: 299 SSLTACAKLSSLGWGKQLHAQVIRSLPCIDPYVASAMVELYAKCGCFKEARRVFSSLRDR 358

Query: 275 DLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIH 334
           + +S   +I G+   G    SL LF Q+ A    V+   +  +I        + L   +H
Sbjct: 359 NTVSWTVLIGGFLQYGCFSESLELFNQMRAELMTVDQFALATIISGCSNRMDMCLARQLH 418

Query: 335 SFCLKSG-----IVSNSSV--------------------------LTALSTVYSRLNEME 363
           S  LKSG     ++SNS +                           T + T YS++  + 
Sbjct: 419 SLSLKSGHTRAVVISNSLISMYAKCGNLQNAESIFSSMEERDIVSWTGMLTAYSQVGNIG 478

Query: 364 AARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASK-VAPNPVTVSSILSAC 422
            AR+ FD  S +++ +WNAM+  Y Q+G  E+ + ++  M   K V P+ VT  ++   C
Sbjct: 479 KAREFFDGMSTRNVITWNAMLGAYIQHGAEEDGLKMYSAMLTEKDVIPDWVTYVTLFRGC 538

Query: 423 AQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWN 482
           A +GA  LG  +           +  V  A+I MY+KCG I EAR++FD +S K  V+WN
Sbjct: 539 ADMGANKLGDQITGHTVKVGLILDTSVMNAVITMYSKCGRISEARKIFDFLSRKDLVSWN 598

Query: 483 TMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHD 542
            MI+GY  HG G +A+++F +ML  G +P  +++++VL +CSH+GLV+EG   F  +  D
Sbjct: 599 AMITGYSQHGMGKQAIEIFDDMLKKGAKPDYISYVAVLSSCSHSGLVQEGKFYFDMLKRD 658

Query: 543 HGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARV 602
           H   P  EH++CMVD+L RAG L +A   I  + ++P   VWGALL AC  H +  LA +
Sbjct: 659 HNVSPGLEHFSCMVDLLARAGNLIEAKNLIDEMPMKPTAEVWGALLSACKTHGNNELAEL 718

Query: 603 ASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPH 662
           A++ LF+LD  + G ++LL+ IY+     + +A VR++++ + + K PG + +EV    H
Sbjct: 719 AAKHLFDLDSPDSGGYMLLAKIYADAGKSVDSAQVRKLMRDKGIKKNPGYSWMEVKNKVH 778

Query: 663 VFTSGDQLHPQSTAIYAMLEKLNGKMREAGF-QTETV-TALHDVEEEEKELMMKVHSEKL 720
           VF + D  HPQ  AI   L++L  K+ + G+ +TE++ + +H             HSEKL
Sbjct: 779 VFKAEDVSHPQVIAIREKLDELMEKIAQLGYVRTESLRSEIH-------------HSEKL 825

Query: 721 AIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSC 780
           A+AFG++       I I+KNLR+C DCHT  K IS VTGR  V+RDA RFHHFKGG CSC
Sbjct: 826 AVAFGIMNLPAWMPIHIMKNLRICGDCHTVIKLISTVTGREFVIRDAVRFHHFKGGSCSC 885

Query: 781 GDYW 784
           GDYW
Sbjct: 886 GDYW 889



 Score = 43.9 bits (102), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 42/187 (22%), Positives = 76/187 (40%), Gaps = 34/187 (18%)

Query: 415 VSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEAR------- 467
           ++  L +C   GA++  + +H  + S    S +++   L+  Y  CG + +AR       
Sbjct: 31  LADALRSCGARGALAGARALHGRLVSVGLASAVFLQNTLLHAYLSCGALPDARGLLRGDI 90

Query: 468 -------------------------ELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFS 502
                                    ELF  M  +   +WNT++SGY   G  L+A++ F 
Sbjct: 91  TEPNVITHNIMMNGYAKLGSLSDAEELFGRMPRRDVTSWNTLMSGYYQSGRFLDAMESFV 150

Query: 503 EMLHSGIR-PSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGR 561
            M  SG   P+  TF   + +C   G      ++   ++   GF+   +    +VD+  R
Sbjct: 151 SMRRSGDSLPNAFTFGCAMKSCGALGWHEVALQLL-GLLTKFGFQGDPDVATGIVDMFVR 209

Query: 562 AGQLEKA 568
            G ++ A
Sbjct: 210 CGAVDFA 216


>gi|449457327|ref|XP_004146400.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49710-like [Cucumis sativus]
          Length = 720

 Score =  434 bits (1116), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 240/653 (36%), Positives = 378/653 (57%), Gaps = 15/653 (2%)

Query: 142 DLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMV 201
           ++F    L+  Y K S+V+ A ++FD+MP+ D+V +N++I+   +    Q +  +F +M 
Sbjct: 73  NVFSFNTLISAYAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGDTQPAFQLFLEM- 131

Query: 202 RNGGTWLDSTSVAAVLPAVAEVQELRLGM--EIQCLGLKLGFHDHVYVLTGLVSFYSKCG 259
           R     +D  +++ ++ A      + +G+  ++  L +  G   +V V   L++ YSK G
Sbjct: 132 REAFLDMDGFTLSGIITACG----INVGLIRQLHALSVVTGLDSYVSVGNALITSYSKNG 187

Query: 260 EVERAELLFRDIVRP-DLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLI 318
            ++ A  +F  +    D +S N+M+  Y  + +   +L L+ ++      V+  T+  ++
Sbjct: 188 FLKEARRIFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLASVL 247

Query: 319 PVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNE-MEAARKLFDESSEKSL 377
             F     L      H+  +KSG   NS V + L  +YS+    M   RK+FDE S   L
Sbjct: 248 TAFTNVQDLLGGLQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEISNPDL 307

Query: 378 ASWNAMIAGYT-QNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHE 436
             WN MI+GY+    L++EA+  F+++Q     P+  ++  ++SAC+ + + S G+ VH 
Sbjct: 308 VLWNTMISGYSLYEDLSDEALECFRQLQVVGHRPDDCSLVCVISACSNMSSPSQGRQVHG 367

Query: 437 LVKSRNFESN-IYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGL 495
           L    +  SN I V+ ALI MY+KCGN+ +A+ LFD M   + V++N+MI+GY  HG G 
Sbjct: 368 LALKLDIPSNRISVNNALIAMYSKCGNLRDAKTLFDTMPEHNTVSYNSMIAGYAQHGMGF 427

Query: 496 EALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACM 555
           ++L LF  ML  G  P+ +TF+SVL AC+H G V +G   F  M    G +P A H++CM
Sbjct: 428 QSLHLFQRMLEMGFTPTNITFISVLAACAHTGRVEDGKIYFNMMKQKFGIEPEAGHFSCM 487

Query: 556 VDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENV 615
           +D+LGRAG+L +A   I+ +  +PG   W ALLGAC IH +  LA  A+ +L +LDP N 
Sbjct: 488 IDLLGRAGKLSEAERLIETIPFDPGFFFWSALLGACRIHGNVELAIKAANRLLQLDPLNA 547

Query: 616 GYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQST 675
             +V+L+NIYS       AA+VR++++ R + K PGC+ IEV    H+F + D  HP   
Sbjct: 548 APYVMLANIYSDNGRLQDAASVRKLMRDRGVKKKPGCSWIEVNRRIHIFVAEDTFHPMIK 607

Query: 676 AIYAMLEKLNGKMREAGFQTETVTAL----HDVEEEEKELMMKVHSEKLAIAFGLIATEP 731
            I   LE++  K+++ G+  E  +AL      V + E+EL +  HSEKLA++FGL++T  
Sbjct: 608 KIQEYLEEMMRKIKKVGYTPEVRSALVGGDDRVWQREEELRLGHHSEKLAVSFGLMSTRE 667

Query: 732 GTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           G  I + KNLR+C+DCH A K+IS+V  R I VRD++RFH FK G CSCG YW
Sbjct: 668 GEPILVFKNLRICVDCHNAIKYISEVVKREITVRDSHRFHCFKDGQCSCGGYW 720



 Score =  132 bits (331), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 95/346 (27%), Positives = 168/346 (48%), Gaps = 36/346 (10%)

Query: 224 QELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGE----------------------- 260
           ++LR G  +  L +K       Y+    +  YSKC                         
Sbjct: 22  RDLRTGKSLHALYIKSFVPTSTYLSNHFLLLYSKCRRLSAARRVFDHTHDCNVFSFNTLI 81

Query: 261 --------VERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSS 312
                   VE A  LF ++ +PD +S N +I+ Y   G T+ + +LF ++  +   ++  
Sbjct: 82  SAYAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGDTQPAFQLFLEMREAFLDMDGF 141

Query: 313 TIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDES 372
           T+ G+I       ++ L   +H+  + +G+ S  SV  AL T YS+   ++ AR++F   
Sbjct: 142 TLSGIITACGI--NVGLIRQLHALSVVTGLDSYVSVGNALITSYSKNGFLKEARRIFHWL 199

Query: 373 SE-KSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLG 431
           SE +   SWN+M+  Y Q+    +A+ L+ EM    +  +  T++S+L+A   +  +  G
Sbjct: 200 SEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLASVLTAFTNVQDLLGG 259

Query: 432 KWVHELVKSRNFESNIYVSTALIDMYAKCGN-IVEARELFDLMSHKSEVTWNTMISGYGL 490
              H  +    +  N +V + LID+Y+KCG  +++ R++FD +S+   V WNTMISGY L
Sbjct: 260 LQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEISNPDLVLWNTMISGYSL 319

Query: 491 HGH-GLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEI 535
           +     EAL+ F ++   G RP   + + V+ ACS+     +G ++
Sbjct: 320 YEDLSDEALECFRQLQVVGHRPDDCSLVCVISACSNMSSPSQGRQV 365



 Score = 99.4 bits (246), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 114/456 (25%), Positives = 191/456 (41%), Gaps = 40/456 (8%)

Query: 25  LTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKP-DLFLFNVIIRGFS 83
           + Q HA  ++ G  + +S    L    S       AR +F  + +  D   +N ++  + 
Sbjct: 157 IRQLHALSVVTGLDSYVSVGNALITSYSKNGFLKEARRIFHWLSEDRDEVSWNSMVVAYM 216

Query: 84  NNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDL 143
            +     ++  Y  +     L  D FT + VL+A +   D   G+  H   I SGY  + 
Sbjct: 217 QHREGSKALELYLEMTVR-GLIVDIFTLASVLTAFTNVQDLLGGLQFHAKLIKSGYHQNS 275

Query: 144 FVGAALVDLYFKF-SWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVR 202
            VG+ L+DLY K    +   RKVFD++   D VLWN+MISG        D        ++
Sbjct: 276 HVGSGLIDLYSKCGGCMLDCRKVFDEISNPDLVLWNTMISGYSLYEDLSDEALECFRQLQ 335

Query: 203 NGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGF-HDHVYVLTGLVSFYSKCGEV 261
             G   D  S+  V+ A + +     G ++  L LKL    + + V   L++ YSKCG +
Sbjct: 336 VVGHRPDDCSLVCVISACSNMSSPSQGRQVHGLALKLDIPSNRISVNNALIAMYSKCGNL 395

Query: 262 ERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVF 321
             A+ LF  +   + +S N+MI+GY  +G    SL LF+++L           +G  P  
Sbjct: 396 RDAKTLFDTMPEHNTVSYNSMIAGYAQHGMGFQSLHLFQRMLE----------MGFTPTN 445

Query: 322 YPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWN 381
             F  + L  C H+  ++ G +                N M+    +     E     ++
Sbjct: 446 ITFISV-LAACAHTGRVEDGKIY--------------FNMMKQKFGI-----EPEAGHFS 485

Query: 382 AMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLG-KWVHELVKS 440
            MI    + G   EA  L + +      P     S++L AC   G + L  K  + L++ 
Sbjct: 486 CMIDLLGRAGKLSEAERLIETI---PFDPGFFFWSALLGACRIHGNVELAIKAANRLLQL 542

Query: 441 RNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHK 476
               +  YV   L ++Y+  G + +A  +  LM  +
Sbjct: 543 DPLNAAPYV--MLANIYSDNGRLQDAASVRKLMRDR 576



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/158 (25%), Positives = 71/158 (44%), Gaps = 5/158 (3%)

Query: 444 ESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSE 503
           + N++    LI  YAK   +  A +LFD M     V++NT+I+ Y   G    A QLF E
Sbjct: 71  DCNVFSFNTLISAYAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGDTQPAFQLFLE 130

Query: 504 MLHSGIRPSGVTFLSVLYACS-HAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRA 562
           M  + +   G T   ++ AC  + GL+R+      ++    G          ++    + 
Sbjct: 131 MREAFLDMDGFTLSGIITACGINVGLIRQ----LHALSVVTGLDSYVSVGNALITSYSKN 186

Query: 563 GQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLA 600
           G L++A      L+ +     W +++ A M H++ + A
Sbjct: 187 GFLKEARRIFHWLSEDRDEVSWNSMVVAYMQHREGSKA 224



 Score = 48.5 bits (114), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 32/121 (26%), Positives = 57/121 (47%), Gaps = 4/121 (3%)

Query: 419 LSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSE 478
           L  C     +  GK +H L       ++ Y+S   + +Y+KC  +  AR +FD     + 
Sbjct: 15  LKTCIAHRDLRTGKSLHALYIKSFVPTSTYLSNHFLLLYSKCRRLSAARRVFDHTHDCNV 74

Query: 479 VTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQS 538
            ++NT+IS Y    +   A QLF EM     +P  V++ +++ A +  G  +   ++F  
Sbjct: 75  FSFNTLISAYAKESYVEVAHQLFDEM----PQPDSVSYNTLIAAYARRGDTQPAFQLFLE 130

Query: 539 M 539
           M
Sbjct: 131 M 131


>gi|357436955|ref|XP_003588753.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355477801|gb|AES59004.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 600

 Score =  434 bits (1116), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 229/565 (40%), Positives = 331/565 (58%), Gaps = 11/565 (1%)

Query: 231 EIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERA-ELLF---RDIVRP----DLISCNAM 282
           +I    LK G  ++  +LT   S  S    +  A   LF        P    D    N +
Sbjct: 36  QIHAFILKTGLQNNPLILTKFTSTSSNLNSIHYATSFLFPPSHTTSTPTPSYDAFLFNTL 95

Query: 283 ISGYTCNGKTES-SLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSG 341
           I  Y+    ++S S   +R +L      N  T   ++      G L L  C+H   +K G
Sbjct: 96  IRAYSQTRDSKSNSFLFYRTMLRYGVTPNKFTFPFVLKGCAGIGSLRLGKCVHGCVVKFG 155

Query: 342 IVSNSSVLTALSTVYSRLNE--MEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISL 399
              +  VL  L  +Y  L E   E A K+FD+S +    +W+AMIAG+ + G +  A+ L
Sbjct: 156 FEEDVHVLNTLIHMYCCLGEDGFEFAEKVFDDSPKMDTVTWSAMIAGFVRLGCSSRAVDL 215

Query: 400 FQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAK 459
           F+EMQ   V P+ +T+ S+LSACA LGA+ LGKWV   V+ +N   ++ +  ALIDM+AK
Sbjct: 216 FREMQVMGVCPDEITMVSVLSACADLGALELGKWVESYVEKKNIPKSVELCNALIDMFAK 275

Query: 460 CGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSV 519
           CGN+ +A +LF  M  ++ V+W ++I+G  +HG GL+A+ LF EM+ +GI P  V F+ V
Sbjct: 276 CGNVDKAIKLFRQMDSRTIVSWTSVIAGLAMHGRGLDAVSLFDEMVENGITPDDVAFIGV 335

Query: 520 LYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEP 579
           L ACSH+GLV +G   F SM  +    P  EHY CMVD+L R G +++A EF++ +  EP
Sbjct: 336 LSACSHSGLVDKGRYYFGSMERNFSIVPKVEHYGCMVDLLCRGGFVKEAFEFVQKMPFEP 395

Query: 580 GPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQ 639
              +W  ++ AC    +  L    S++L + +P +   +VLLSNIY+  R + +   VR+
Sbjct: 396 NQIIWRTIITACHATGELKLGESISKELIKSEPMHESNYVLLSNIYAKLRQWEKKTKVRE 455

Query: 640 VVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVT 699
           ++  R + K PG T+IEV    + F +GD+ H Q   IY M++++  ++++AG+   T  
Sbjct: 456 MMDMRGMKKVPGSTMIEVNNEMYEFVAGDKSHDQYKEIYEMVDEMGREIKKAGYVPTTSQ 515

Query: 700 ALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTG 759
            L D++EE+KE  +  HSEKLAIAF L+ T PGT IRI+KNLRVC DCH+ATKFISKV  
Sbjct: 516 VLLDIDEEDKEDALYRHSEKLAIAFALLNTPPGTSIRIVKNLRVCEDCHSATKFISKVYN 575

Query: 760 RVIVVRDANRFHHFKGGVCSCGDYW 784
           R IVVRD NRFHHFK G+CSC D+W
Sbjct: 576 REIVVRDRNRFHHFKNGLCSCRDFW 600



 Score =  162 bits (409), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 142/510 (27%), Positives = 234/510 (45%), Gaps = 69/510 (13%)

Query: 1   MSMKTPQSR---NLFLSLLKG-AKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKA 56
           + + TP++R      L+LL     T S+LTQ HA I+  G QN+   +TK     S+  +
Sbjct: 6   LPINTPKTRLTEQTILTLLNSHCNTLSKLTQIHAFILKTGLQNNPLILTKFTSTSSNLNS 65

Query: 57  TCYARALFF------SIPKP--DLFLFNVIIRGFSNNEMPKS-SICFY-THLRKNTALTP 106
             YA +  F      S P P  D FLFN +IR +S     KS S  FY T LR    +TP
Sbjct: 66  IHYATSFLFPPSHTTSTPTPSYDAFLFNTLIRAYSQTRDSKSNSFLFYRTMLR--YGVTP 123

Query: 107 DNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLY-------FKFSWV 159
           + FT+ FVL   +      +G  +HG  +  G+  D+ V   L+ +Y       F+F   
Sbjct: 124 NKFTFPFVLKGCAGIGSLRLGKCVHGCVVKFGFEEDVHVLNTLIHMYCCLGEDGFEF--- 180

Query: 160 KSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPA 219
             A KVFD  P+ DTV W++MI+G ++  C   ++ +F +M +  G   D  ++ +VL A
Sbjct: 181 --AEKVFDDSPKMDTVTWSAMIAGFVRLGCSSRAVDLFREM-QVMGVCPDEITMVSVLSA 237

Query: 220 VAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISC 279
            A++  L LG  ++    K      V +   L+  ++KCG V++A  LFR +    ++S 
Sbjct: 238 CADLGALELGKWVESYVEKKNIPKSVELCNALIDMFAKCGNVDKAIKLFRQMDSRTIVSW 297

Query: 280 NAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLK 339
            ++I+G   +G+   ++ LF +++ +    +    +G+           L+ C HS  + 
Sbjct: 298 TSVIAGLAMHGRGLDAVSLFDEMVENGITPDDVAFIGV-----------LSACSHSGLVD 346

Query: 340 SGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISL 399
            G     S+    S V                     +  +  M+    + G  +EA   
Sbjct: 347 KGRYYFGSMERNFSIV-------------------PKVEHYGCMVDLLCRGGFVKEAFEF 387

Query: 400 FQEMQASKVAPNPVTVSSILSACAQLGAISLGKWV-HELVKSRNFESNIYVSTALIDMYA 458
            Q+M      PN +   +I++AC   G + LG+ +  EL+KS     + YV   L ++YA
Sbjct: 388 VQKM---PFEPNQIIWRTIITACHATGELKLGESISKELIKSEPMHESNYV--LLSNIYA 442

Query: 459 KCGNI---VEARELFDLMSHKSEVTWNTMI 485
           K        + RE+ D+   K +V  +TMI
Sbjct: 443 KLRQWEKKTKVREMMDMRGMK-KVPGSTMI 471


>gi|125542314|gb|EAY88453.1| hypothetical protein OsI_09918 [Oryza sativa Indica Group]
          Length = 781

 Score =  434 bits (1116), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 244/724 (33%), Positives = 394/724 (54%), Gaps = 13/724 (1%)

Query: 66  SIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDR- 124
           ++  PD FL NV+IRGF++  +P  ++  Y  + ++ A  PD FT+  V+     CC R 
Sbjct: 66  AVRGPDAFLHNVMIRGFADAGLPAGALAAYRGMLEDGA-RPDRFTFPVVVK----CCARL 120

Query: 125 ---SIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMI 181
                G   HG  I  G   D++   +LV  Y K   V+ A +VFD MP +D V WN M+
Sbjct: 121 GGLDEGRAAHGMVIKLGLEHDVYTCNSLVAFYAKLGLVEDAERVFDGMPVRDIVTWNIMV 180

Query: 182 SGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGF 241
            G + N     ++  F +M        DS  + A L A         G EI    ++ G 
Sbjct: 181 DGYVSNGLGSLALACFQEMHDALEVQHDSVGIIAALAACCLEFSSMQGKEIHGYVIRHGL 240

Query: 242 HDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQ 301
              + V T L+  Y KCGEV  A  +F  +    +++ N MI GY  N + + +   F Q
Sbjct: 241 EQDIKVGTSLLDMYCKCGEVAYARSVFATMPLRTVVTWNCMIGGYALNERPDEAFDCFMQ 300

Query: 302 LLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNE 361
           + A   +V   T + L+              +H + ++   + +  + TAL  +Y ++ +
Sbjct: 301 MRAEGLQVEVVTAINLLAACAQTESSLYGRSVHGYVVRRQFLPHVVLETALLEMYGKVGK 360

Query: 362 MEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSA 421
           +E++ K+F + + K+L SWN MIA Y    +  EAI+LF E+    + P+  T+S+++ A
Sbjct: 361 VESSEKIFGKIANKTLVSWNNMIAAYMYKEMYTEAITLFLELLNQPLYPDYFTMSTVVPA 420

Query: 422 CAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTW 481
              LG++   + +H  +    +  N  +  A++ MYA+ G++V +RE+FD M  K  ++W
Sbjct: 421 FVLLGSLRHCRQIHSYIIGLGYAENTLIMNAVLHMYARSGDVVASREIFDKMVSKDVISW 480

Query: 482 NTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIH 541
           NTMI GY +HG G  AL++F EM ++G++P+  TF+SVL ACS +GLV EG   F  M+ 
Sbjct: 481 NTMIMGYAIHGQGKTALEMFDEMKYNGLQPNESTFVSVLTACSVSGLVDEGWMHFNLMLQ 540

Query: 542 DHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLAR 601
           ++G  P  EHY CM D+LGR G L + L+FI+ + ++P   VWG+LL A     D ++A 
Sbjct: 541 EYGMIPQIEHYGCMTDLLGREGDLREVLQFIESMPIDPTSRVWGSLLTASRNQNDIDIAE 600

Query: 602 VASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTP 661
            A+E++F+L+ +N G +++LS++Y+    +     VR ++K++ L +    +L+E+  T 
Sbjct: 601 YAAERIFQLEHDNTGCYIVLSSMYADAGRWEDVERVRLLMKEKGLRRTEPISLVELHSTA 660

Query: 662 HVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMM-KVHSEKL 720
             F +GD  H QS  I+ + + L+ K++E     +T    + V    +   M   HS +L
Sbjct: 661 CSFANGDMSHSQSRTIHEVSDILSRKIKET---DDTRNQSYPVPVATRTTTMPNKHSVRL 717

Query: 721 AIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSC 780
           A+ FGLI++E G+ I + KN+R+C  CH A K IS+ +GR IVV D+  +H F  G C C
Sbjct: 718 AVVFGLISSEIGSPILVKKNVRICNHCHHALKLISRYSGRRIVVGDSKIYHEFSDGSCCC 777

Query: 781 GDYW 784
           GDYW
Sbjct: 778 GDYW 781



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 122/465 (26%), Positives = 221/465 (47%), Gaps = 11/465 (2%)

Query: 29  HAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNEMP 88
           H  +I  G ++D+ T   L    +       A  +F  +P  D+  +N+++ G+ +N + 
Sbjct: 130 HGMVIKLGLEHDVYTCNSLVAFYAKLGLVEDAERVFDGMPVRDIVTWNIMVDGYVSNGLG 189

Query: 89  KSSICFYTHLRKNTALTPDNFTYSFVLSAASACC---DRSIGVLLHGHAIVSGYGSDLFV 145
             ++  +  +     +  D+     +++A +ACC       G  +HG+ I  G   D+ V
Sbjct: 190 SLALACFQEMHDALEVQHDSVG---IIAALAACCLEFSSMQGKEIHGYVIRHGLEQDIKV 246

Query: 146 GAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGG 205
           G +L+D+Y K   V  AR VF  MP +  V WN MI G   N    ++   F  M R  G
Sbjct: 247 GTSLLDMYCKCGEVAYARSVFATMPLRTVVTWNCMIGGYALNERPDEAFDCFMQM-RAEG 305

Query: 206 TWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAE 265
             ++  +   +L A A+ +    G  +    ++  F  HV + T L+  Y K G+VE +E
Sbjct: 306 LQVEVVTAINLLAACAQTESSLYGRSVHGYVVRRQFLPHVVLETALLEMYGKVGKVESSE 365

Query: 266 LLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFG 325
            +F  I    L+S N MI+ Y        ++ LF +LL      +  T+  ++P F   G
Sbjct: 366 KIFGKIANKTLVSWNNMIAAYMYKEMYTEAITLFLELLNQPLYPDYFTMSTVVPAFVLLG 425

Query: 326 HLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIA 385
            L     IHS+ +  G   N+ ++ A+  +Y+R  ++ A+R++FD+   K + SWN MI 
Sbjct: 426 SLRHCRQIHSYIIGLGYAENTLIMNAVLHMYARSGDVVASREIFDKMVSKDVISWNTMIM 485

Query: 386 GYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVH--ELVKSRNF 443
           GY  +G  + A+ +F EM+ + + PN  T  S+L+AC+  G +  G W+H   +++    
Sbjct: 486 GYAIHGQGKTALEMFDEMKYNGLQPNESTFVSVLTACSVSGLVDEG-WMHFNLMLQEYGM 544

Query: 444 ESNIYVSTALIDMYAKCGNIVEARELFDLMS-HKSEVTWNTMISG 487
              I     + D+  + G++ E  +  + M    +   W ++++ 
Sbjct: 545 IPQIEHYGCMTDLLGREGDLREVLQFIESMPIDPTSRVWGSLLTA 589



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 75/295 (25%), Positives = 151/295 (51%), Gaps = 2/295 (0%)

Query: 24  QLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFS 83
           Q  + H  +I HG + D+   T L           YAR++F ++P   +  +N +I G++
Sbjct: 227 QGKEIHGYVIRHGLEQDIKVGTSLLDMYCKCGEVAYARSVFATMPLRTVVTWNCMIGGYA 286

Query: 84  NNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDL 143
            NE P  +   +  +R    L  +  T   +L+A +       G  +HG+ +   +   +
Sbjct: 287 LNERPDEAFDCFMQMRAE-GLQVEVVTAINLLAACAQTESSLYGRSVHGYVVRRQFLPHV 345

Query: 144 FVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRN 203
            +  AL+++Y K   V+S+ K+F K+  K  V WN+MI+  M    + ++I +F +++ N
Sbjct: 346 VLETALLEMYGKVGKVESSEKIFGKIANKTLVSWNNMIAAYMYKEMYTEAITLFLELL-N 404

Query: 204 GGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVER 263
              + D  +++ V+PA   +  LR   +I    + LG+ ++  ++  ++  Y++ G+V  
Sbjct: 405 QPLYPDYFTMSTVVPAFVLLGSLRHCRQIHSYIIGLGYAENTLIMNAVLHMYARSGDVVA 464

Query: 264 AELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLI 318
           +  +F  +V  D+IS N MI GY  +G+ +++L +F ++  +  + N ST V ++
Sbjct: 465 SREIFDKMVSKDVISWNTMIMGYAIHGQGKTALEMFDEMKYNGLQPNESTFVSVL 519


>gi|297804050|ref|XP_002869909.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297315745|gb|EFH46168.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 595

 Score =  434 bits (1116), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 215/524 (41%), Positives = 329/524 (62%), Gaps = 3/524 (0%)

Query: 264 AELLFRDIVRP-DLISCNAMISGYTCNGKTESSLRLFRQLLASA-ERVNSSTIVGLIPVF 321
           A  +F  I +P ++   N +I GY   G + S++ L+R++ AS     ++ T   L+   
Sbjct: 72  AHKVFSKIEKPINVFIWNTLIRGYAEIGNSVSAVSLYREMRASGFVEPDTHTYPFLLKAV 131

Query: 322 YPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWN 381
                + L   IHS  ++SG  S   V  +L  +Y+   ++ +A K+FD+  EK L +WN
Sbjct: 132 GKMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWN 191

Query: 382 AMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSR 441
           ++I G+ +NG  EEA++L+ EM    + P+  T+ S+LSACA++GA++LGK  H  +   
Sbjct: 192 SVINGFAENGKPEEALALYTEMDLKGIKPDGFTIVSLLSACAKIGALTLGKRFHVYMIKV 251

Query: 442 NFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLF 501
               N++ S  L+D+YA+CG + EA+ LFD M  K+ V+W ++I G  ++G G EA++LF
Sbjct: 252 GLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGLGKEAIELF 311

Query: 502 SEM-LHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILG 560
             M    G+ P  +TF+ +LYACSH G+V+EG E F+ M  ++  +P  EH+ CMVD+L 
Sbjct: 312 KNMESKEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMSEEYKIEPRIEHFGCMVDLLA 371

Query: 561 RAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVL 620
           RAGQ++KA E+I  + ++P   +W  LLGAC +H D++LA +A  K+ +L+P + G +VL
Sbjct: 372 RAGQVKKAYEYILKMPMQPNVVIWRTLLGACTVHGDSDLAELARMKILQLEPNHSGDYVL 431

Query: 621 LSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAM 680
           LSN+Y++E+ +     +R+ + +  + K PG +L+EVG   H F  GD+ HPQ+  IYA 
Sbjct: 432 LSNMYASEQRWSDVQKIRKQMLRDGVRKVPGHSLVEVGNRVHEFLMGDKSHPQNDMIYAK 491

Query: 681 LEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKN 740
           L+++  ++R  G+  +      DVEEEEKE  +  HSEK+AIAF LI+T     IR++KN
Sbjct: 492 LKEMTDRLRLEGYVPQISNVYVDVEEEEKENALVYHSEKIAIAFMLISTPERWPIRVVKN 551

Query: 741 LRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           L+VC DCH A K +SKV  R IVVRD +RFHHFK G CSC DYW
Sbjct: 552 LKVCADCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 595



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 107/372 (28%), Positives = 187/372 (50%), Gaps = 17/372 (4%)

Query: 162 ARKVFDKMPEKDTV-LWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAV 220
           A KVF K+ +   V +WN++I G  +      ++ ++ +M  +G    D+ +   +L AV
Sbjct: 72  AHKVFSKIEKPINVFIWNTLIRGYAEIGNSVSAVSLYREMRASGFVEPDTHTYPFLLKAV 131

Query: 221 AEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCN 280
            ++ ++RLG  I  + ++ GF   +YV   L+  Y+ CG+V  A  +F  +   DL++ N
Sbjct: 132 GKMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWN 191

Query: 281 AMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKS 340
           ++I+G+  NGK E +L L+ ++     + +  TIV L+      G L L    H + +K 
Sbjct: 192 SVINGFAENGKPEEALALYTEMDLKGIKPDGFTIVSLLSACAKIGALTLGKRFHVYMIKV 251

Query: 341 GIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLF 400
           G+  N      L  +Y+R   +E A+ LFDE  +K+  SW ++I G   NGL +EAI LF
Sbjct: 252 GLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGLGKEAIELF 311

Query: 401 QEMQASK-VAPNPVTVSSILSACAQLGAISLG-KWVHELVKSRNFESNIYVSTALIDMYA 458
           + M++ + + P  +T   IL AC+  G +  G ++   + +    E  I     ++D+ A
Sbjct: 312 KNMESKEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMSEEYKIEPRIEHFGCMVDLLA 371

Query: 459 KCGNIVEARE-LFDLMSHKSEVTWNTMISGYGLHGHG-------LEALQLFSEMLHSGIR 510
           + G + +A E +  +    + V W T++    +HG         ++ LQL  E  HSG  
Sbjct: 372 RAGQVKKAYEYILKMPMQPNVVIWRTLLGACTVHGDSDLAELARMKILQL--EPNHSG-- 427

Query: 511 PSGVTFLSVLYA 522
                 LS +YA
Sbjct: 428 --DYVLLSNMYA 437



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 117/421 (27%), Positives = 197/421 (46%), Gaps = 40/421 (9%)

Query: 18  GAKTQSQLTQTHAQIIIHGFQ-NDLSTVTKLAHRLSDFKAT---CYARALFFSIPKP-DL 72
           G  + ++L Q HA  I +G   +D      L   L    +     YA  +F  I KP ++
Sbjct: 26  GVSSLTKLRQIHAFSIRNGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKIEKPINV 85

Query: 73  FLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHG 132
           F++N +IRG++      S++  Y  +R +  + PD  TY F+L A     D  +G  +H 
Sbjct: 86  FIWNTLIRGYAEIGNSVSAVSLYREMRASGFVEPDTHTYPFLLKAVGKMADVRLGETIHS 145

Query: 133 HAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQD 192
             I SG+GS ++V  +L+ LY     V SA KVFDKMPEKD V WNS+I+G  +N   ++
Sbjct: 146 VVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEE 205

Query: 193 SIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLV 252
           ++ ++ +M    G   D  ++ ++L A A++  L LG       +K+G   +++    L+
Sbjct: 206 ALALYTEMDLK-GIKPDGFTIVSLLSACAKIGALTLGKRFHVYMIKVGLTRNLHSSNVLL 264

Query: 253 SFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSS 312
             Y++CG VE A+ LF ++V  + +S  ++I G   NG  + ++ LF+         N  
Sbjct: 265 DLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGLGKEAIELFK---------NME 315

Query: 313 TIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDES 372
           +  GL+P    F  + L  C H   +K G                     E  R++ +E 
Sbjct: 316 SKEGLLPCEITFVGI-LYACSHCGMVKEG--------------------FEYFRRMSEEY 354

Query: 373 S-EKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLG 431
             E  +  +  M+    + G  ++A     +M    + PN V   ++L AC   G   L 
Sbjct: 355 KIEPRIEHFGCMVDLLARAGQVKKAYEYILKM---PMQPNVVIWRTLLGACTVHGDSDLA 411

Query: 432 K 432
           +
Sbjct: 412 E 412


>gi|359495864|ref|XP_002266254.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65570-like [Vitis vinifera]
          Length = 751

 Score =  434 bits (1115), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 241/657 (36%), Positives = 375/657 (57%), Gaps = 6/657 (0%)

Query: 130 LHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCC 189
           +  HA+  G+   L  G  L+D Y K   V  ARKVFD++P +  V WNSMI+  ++N  
Sbjct: 99  IQSHALKRGFHHSL--GNKLIDAYLKCGSVVYARKVFDEVPHRHIVAWNSMIASYIRNGR 156

Query: 190 FQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFH-DHVYVL 248
            +++I ++  MV +G    D  + ++V  A +++  +  G       + LG    +V+V 
Sbjct: 157 SKEAIDIYQRMVPDG-ILPDEFTFSSVFKAFSDLGLVHEGQRAHGQSVVLGVGVSNVFVG 215

Query: 249 TGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAER 308
           + LV  Y+K G++  A L+   +V  D++   A+I GY+ +G+   SL++FR +      
Sbjct: 216 SALVDMYAKFGKMRDARLVSDQVVGKDVVLFTALIVGYSHHGEDGESLQVFRNMTKKGIE 275

Query: 309 VNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKL 368
            N  T+  ++        L     IH   +K+G+ S  +  T+L T+Y R   ++ + K+
Sbjct: 276 ANEYTLSSVLVCCGNLEDLTSGRLIHGLIVKAGLESAVASQTSLLTMYYRCGLVDDSLKV 335

Query: 369 FDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAI 428
           F +    +  +W ++I G  QNG  E A+  F++M  S + PN  T+SS+L AC+ L  +
Sbjct: 336 FKQFINPNQVTWTSVIVGLVQNGREEIALLKFRQMLRSSITPNSFTLSSVLRACSSLAML 395

Query: 429 SLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGY 488
             GK +H +V     + + YV  ALID Y KCG+   AR +F+ +     V+ N+MI  Y
Sbjct: 396 EQGKQIHAIVMKFGLDIDKYVGAALIDFYGKCGSTEIARSVFNGLLEVDVVSVNSMIYSY 455

Query: 489 GLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPL 548
             +G G EALQLFS M  +G+ P+ VT+L VL AC++AGL+ EG  IF S  +    +  
Sbjct: 456 AQNGFGHEALQLFSGMKDTGLEPNNVTWLGVLSACNNAGLLEEGCHIFSSARNSGNIELT 515

Query: 549 AEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLF 608
            +HYACMVD+LGRAG+L++A   I  + +     +W  LL AC IH D  +A+    ++ 
Sbjct: 516 KDHYACMVDLLGRAGRLKEAEMLINQVNISD-VVIWRTLLSACRIHGDVEMAKRVMNRVI 574

Query: 609 ELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGD 668
           +L PE+ G HVLLSN+Y++  ++ +   ++  +++ +L K P  + ++V    H F +GD
Sbjct: 575 DLAPEDGGTHVLLSNLYASTGNWSKVIEMKSAMREMRLKKNPAMSWVDVEREIHTFMAGD 634

Query: 669 QLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIA 728
             HP    I   LE+L  K++E G+  +T   L D++EE+K   +  HSEKLA+AF L  
Sbjct: 635 WSHPNFRDIREKLEELIEKVKELGYVPDTRFVLQDLDEEKKIRSLYYHSEKLAVAFALWR 694

Query: 729 TE-PGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           +    T IRI+KNLRVC DCHT  KF+SK+ GR I+ RD  RFHHF+ G+CSCGDYW
Sbjct: 695 SNYKNTTIRILKNLRVCGDCHTWMKFVSKIVGRDIIARDVKRFHHFRNGLCSCGDYW 751



 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 90/372 (24%), Positives = 171/372 (45%), Gaps = 4/372 (1%)

Query: 27  QTHAQIIIHGFQ-NDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNN 85
           + H Q ++ G   +++   + L    + F     AR +   +   D+ LF  +I G+S++
Sbjct: 197 RAHGQSVVLGVGVSNVFVGSALVDMYAKFGKMRDARLVSDQVVGKDVVLFTALIVGYSHH 256

Query: 86  EMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFV 145
                S+  + ++ K   +  + +T S VL       D + G L+HG  + +G  S +  
Sbjct: 257 GEDGESLQVFRNMTKK-GIEANEYTLSSVLVCCGNLEDLTSGRLIHGLIVKAGLESAVAS 315

Query: 146 GAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGG 205
             +L+ +Y++   V  + KVF +    + V W S+I GL++N   + ++  F  M+R+  
Sbjct: 316 QTSLLTMYYRCGLVDDSLKVFKQFINPNQVTWTSVIVGLVQNGREEIALLKFRQMLRSSI 375

Query: 206 TWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAE 265
           T  +S ++++VL A + +  L  G +I  + +K G     YV   L+ FY KCG  E A 
Sbjct: 376 T-PNSFTLSSVLRACSSLAMLEQGKQIHAIVMKFGLDIDKYVGAALIDFYGKCGSTEIAR 434

Query: 266 LLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFG 325
            +F  ++  D++S N+MI  Y  NG    +L+LF  +  +    N+ T +G++      G
Sbjct: 435 SVFNGLLEVDVVSVNSMIYSYAQNGFGHEALQLFSGMKDTGLEPNNVTWLGVLSACNNAG 494

Query: 326 HLHLTNCIHSFCLKSGIVS-NSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMI 384
            L     I S    SG +         +  +  R   ++ A  L ++ +   +  W  ++
Sbjct: 495 LLEEGCHIFSSARNSGNIELTKDHYACMVDLLGRAGRLKEAEMLINQVNISDVVIWRTLL 554

Query: 385 AGYTQNGLTEEA 396
           +    +G  E A
Sbjct: 555 SACRIHGDVEMA 566



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 65/250 (26%), Positives = 115/250 (46%), Gaps = 19/250 (7%)

Query: 63  LFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACC 122
           +F     P+   +  +I G   N   + ++  +  + + +++TP++FT S VL A S   
Sbjct: 335 VFKQFINPNQVTWTSVIVGLVQNGREEIALLKFRQMLR-SSITPNSFTLSSVLRACS--- 390

Query: 123 DRSIGVLLHG---HAIVSGYGSDL--FVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLW 177
             S+ +L  G   HAIV  +G D+  +VGAAL+D Y K    + AR VF+ + E D V  
Sbjct: 391 --SLAMLEQGKQIHAIVMKFGLDIDKYVGAALIDFYGKCGSTEIARSVFNGLLEVDVVSV 448

Query: 178 NSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGL 237
           NSMI    +N    +++ +F  M ++ G   ++ +   VL A      L  G  I     
Sbjct: 449 NSMIYSYAQNGFGHEALQLFSGM-KDTGLEPNNVTWLGVLSACNNAGLLEEGCHIFSSAR 507

Query: 238 KLG----FHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTE 293
             G      DH      +V    + G ++ AE+L   +   D++    ++S    +G  E
Sbjct: 508 NSGNIELTKDH---YACMVDLLGRAGRLKEAEMLINQVNISDVVIWRTLLSACRIHGDVE 564

Query: 294 SSLRLFRQLL 303
            + R+  +++
Sbjct: 565 MAKRVMNRVI 574


>gi|359484088|ref|XP_002263394.2| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic [Vitis vinifera]
          Length = 762

 Score =  434 bits (1115), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 238/629 (37%), Positives = 361/629 (57%), Gaps = 20/629 (3%)

Query: 162 ARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVA 221
           A+ +F  +      L+NS+I  L  +    +++ ++  M+++G    D  +   V+ A  
Sbjct: 148 AKTIFHHLQNPPPSLYNSLIRALSSSKTPLEALPLYHTMLQSGLK-PDHMTYPFVIKACN 206

Query: 222 EVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNA 281
           E      G+ +    +K GF    Y+++ L+  Y+   ++  A+ LF      D++S NA
Sbjct: 207 ESSVTWFGLLVHTHVVKSGFECDSYIVSSLIHLYANGKDLGAAKQLFNLCSARDVVSWNA 266

Query: 282 MISGYTCNGKTESSLRLF-----RQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSF 336
           MI GY  + +   +  +F     R +++    +N   IVG I              +   
Sbjct: 267 MIDGYVKHVEMGHARMVFDRMVCRDVISWNTMINGYAIVGKIDE---------AKRLFDE 317

Query: 337 CLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEA 396
             +  +VS +S+L      + +   +E A  LF E   + + SWN+M+A Y Q G   EA
Sbjct: 318 MPERNLVSWNSMLAG----FVKCGNVEDAFGLFSEMPCRDVVSWNSMLACYAQCGKPNEA 373

Query: 397 ISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDM 456
           ++LF +M+A  V P   TV S+LSACA LGA+  G  +H  +     E N  V TAL+DM
Sbjct: 374 LALFDQMRAVGVKPTEATVVSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDM 433

Query: 457 YAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTF 516
           YAKCG I  A ++F+ M  K  + WNT+I+G  +HG+  EA QLF EM  +G+ P+ +TF
Sbjct: 434 YAKCGKISLATQVFNAMESKDVLAWNTIIAGMAIHGNVKEAQQLFKEMKEAGVEPNDITF 493

Query: 517 LSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLA 576
           +++L ACSHAG+V EG ++   M   +G +P  EHY C++D+L RAG LE+A+E I  + 
Sbjct: 494 VAILSACSHAGMVDEGQKLLDCMSSSYGIEPKVEHYGCVIDLLARAGFLEEAMELIGTMP 553

Query: 577 VEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAAT 636
           +EP P+  GALLG C IH +  L  +  ++L  L P + G ++LLSNIY+A + +  A  
Sbjct: 554 MEPNPSALGALLGGCRIHGNFELGEMVGKRLINLQPCHSGRYILLSNIYAAAKKWDDARK 613

Query: 637 VRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREA-GFQT 695
           VR ++K   ++K PG ++IE+ G  H F +GD  HP+S  IY  L +++ +++ A G+  
Sbjct: 614 VRNLMKVNGISKVPGVSVIELKGMVHRFVAGDWSHPESNKIYEKLNEIHTRLKSAIGYSA 673

Query: 696 ETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFIS 755
           +T   L D+EEE+KE  + VHSEKLAIA+GL+  +    IRI+KNLRVC DCH   K IS
Sbjct: 674 DTGNVLLDMEEEDKEHALAVHSEKLAIAYGLLHLDSKEAIRIVKNLRVCRDCHHVIKLIS 733

Query: 756 KVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           KV GR I+VRD NRFHHF+ G CSC D+W
Sbjct: 734 KVYGREIIVRDRNRFHHFEDGECSCLDFW 762



 Score =  206 bits (523), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 145/497 (29%), Positives = 242/497 (48%), Gaps = 19/497 (3%)

Query: 3   MKTPQSRNLFLSLLKGAKTQSQLTQTHAQIIIH---GFQNDLSTVTKLAHRLSDFKATCY 59
           +  P S    LSL    KT   L Q HAQII H    FQ               F A  Y
Sbjct: 90  LTNPPSNPQILSLFNPCKTLRHLKQVHAQIITHHNSPFQLSALASLSALSPFPTFLA--Y 147

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           A+ +F  +  P   L+N +IR  S+++ P  ++  Y H    + L PD+ TY FV+ A +
Sbjct: 148 AKTIFHHLQNPPPSLYNSLIRALSSSKTPLEALPLY-HTMLQSGLKPDHMTYPFVIKACN 206

Query: 120 ACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNS 179
                  G+L+H H + SG+  D ++ ++L+ LY     + +A+++F+    +D V WN+
Sbjct: 207 ESSVTWFGLLVHTHVVKSGFECDSYIVSSLIHLYANGKDLGAAKQLFNLCSARDVVSWNA 266

Query: 180 MISGLMKNCCFQDSIWVFGDMV-RNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLK 238
           MI G +K+     +  VF  MV R+  +W    +  A++  + E + L   M  + L   
Sbjct: 267 MIDGYVKHVEMGHARMVFDRMVCRDVISWNTMINGYAIVGKIDEAKRLFDEMPERNL--- 323

Query: 239 LGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRL 298
                       +++ + KCG VE A  LF ++   D++S N+M++ Y   GK   +L L
Sbjct: 324 -------VSWNSMLAGFVKCGNVEDAFGLFSEMPCRDVVSWNSMLACYAQCGKPNEALAL 376

Query: 299 FRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSR 358
           F Q+ A   +   +T+V L+      G L     +H++   + I  NS V TAL  +Y++
Sbjct: 377 FDQMRAVGVKPTEATVVSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMYAK 436

Query: 359 LNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSI 418
             ++  A ++F+    K + +WN +IAG   +G  +EA  LF+EM+ + V PN +T  +I
Sbjct: 437 CGKISLATQVFNAMESKDVLAWNTIIAGMAIHGNVKEAQQLFKEMKEAGVEPNDITFVAI 496

Query: 419 LSACAQLGAISLG-KWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKS 477
           LSAC+  G +  G K +  +  S   E  +     +ID+ A+ G + EA EL   M  + 
Sbjct: 497 LSACSHAGMVDEGQKLLDCMSSSYGIEPKVEHYGCVIDLLARAGFLEEAMELIGTMPMEP 556

Query: 478 EVT-WNTMISGYGLHGH 493
             +    ++ G  +HG+
Sbjct: 557 NPSALGALLGGCRIHGN 573


>gi|302804548|ref|XP_002984026.1| hypothetical protein SELMODRAFT_30095 [Selaginella moellendorffii]
 gi|300148378|gb|EFJ15038.1| hypothetical protein SELMODRAFT_30095 [Selaginella moellendorffii]
          Length = 745

 Score =  434 bits (1115), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 244/730 (33%), Positives = 404/730 (55%), Gaps = 10/730 (1%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           AR +F  I + + F +++++  +  N M + ++  Y  + +   ++ D +T S VL+A +
Sbjct: 21  ARQVFDRIKQRNAFSWSILVECYVQNAMYQEALEVYKEMVRKE-ISIDAYTLSSVLAACT 79

Query: 120 ACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPE-KDTVLWN 178
              D   G ++   A   G+  D+ V  +L+ L+ K   ++ A  VF  M   +D +   
Sbjct: 80  KLLDVEEGRMVQRKAEELGFEKDVVVATSLIHLFAKCGCLEEAESVFRSMGAMRDIISVT 139

Query: 179 SMISGLM---KNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCL 235
           +MI   +   KN    D+ W     +R+ G   D+ + AA+L A +    L  G  I   
Sbjct: 140 AMIGAYVRHGKNDLALDTYW----KMRSQGLEPDAFTYAAILGACSSPDFLLDGKHIHKH 195

Query: 236 GLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESS 295
            L+     ++ V   L++ Y+KCG ++ ++ LF  +   D++S NAMI+ YT  G  + +
Sbjct: 196 ILESKHFGNISVRNALITMYAKCGSLKDSKSLFLTMDVKDVVSWNAMIAAYTLYGHDKDA 255

Query: 296 LRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTV 355
             LF ++       +  T   ++        L     +H      G   + ++   L ++
Sbjct: 256 FSLFHRMCTLGHTPDIYTFSSILGACASPKRLEDGRMLHVRITARGFDRDFAMQNNLISM 315

Query: 356 YSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTV 415
           ++R   +E+AR+ F    +K L +WN M+A Y Q    ++A+ L++ M      P+  T 
Sbjct: 316 FTRCGSLESARRYFYSIEKKELGAWNTMLAAYAQFDKGKDALFLYKNMLLEGFTPDRFTF 375

Query: 416 SSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSH 475
           SS++ +CA LGA+  GK++HE   S  FE ++ + TAL++MYAKCG++ +A++ FD +S+
Sbjct: 376 SSVVDSCASLGALREGKFIHECSTSCGFEKDVILGTALVNMYAKCGSLADAKKSFDGISN 435

Query: 476 KSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEI 535
           K  V+W+ MI+    HGH  EAL+L   M   GI  + VT  SVL+ACSH G + EG + 
Sbjct: 436 KDVVSWSAMIAASAQHGHAEEALELSHLMNLQGIAQNEVTASSVLHACSHGGRLYEGIDY 495

Query: 536 FQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHK 595
           F  +  D G +   E+    +D+LGRAG L++A   +  +  +        LLG C +H 
Sbjct: 496 FMGLSQDFGIERDEENTVGFIDLLGRAGWLKEAEHVLHTMPFKVSFVALVTLLGGCKVHG 555

Query: 596 DTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLI 655
           D    +  ++++  L+PEN G +VLL+N+Y+A   +   A +R+ ++K+ + +  GC+ I
Sbjct: 556 DVRRGKALTKRIVALEPENPGSYVLLNNMYAAAGRWDDVAKLRRYMRKKGVKRQTGCSSI 615

Query: 656 EVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMR-EAGFQTETVTALHDVEEEEKELMMK 714
           E     + F+ GD  +P++  I A LE+L  +M+ E G+  +T    HDV +++KE ++K
Sbjct: 616 EYRDKIYEFSVGDTSNPRNLEIRAELERLYSRMKEEEGYVPDTRDVFHDVSDDKKEELLK 675

Query: 715 VHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFK 774
            HSEK+A+ FGLI + PG+ +RIIKNLRVC DCHT  K  SK+TGR I+VRD  RFHHF+
Sbjct: 676 FHSEKMAMGFGLITSPPGSTLRIIKNLRVCSDCHTVGKLASKITGRRIIVRDGTRFHHFE 735

Query: 775 GGVCSCGDYW 784
           GG+CSCGDYW
Sbjct: 736 GGICSCGDYW 745



 Score =  213 bits (542), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 134/454 (29%), Positives = 231/454 (50%), Gaps = 4/454 (0%)

Query: 142 DLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMV 201
           D F+   ++ +Y K    + AR+VFD++ +++   W+ ++   ++N  +Q+++ V+ +MV
Sbjct: 1   DTFLANMIIQMYGKCKSPEDARQVFDRIKQRNAFSWSILVECYVQNAMYQEALEVYKEMV 60

Query: 202 RNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEV 261
           R   + +D+ ++++VL A  ++ ++  G  +Q    +LGF   V V T L+  ++KCG +
Sbjct: 61  RKEIS-IDAYTLSSVLAACTKLLDVEEGRMVQRKAEELGFEKDVVVATSLIHLFAKCGCL 119

Query: 262 ERAELLFRDI-VRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPV 320
           E AE +FR +    D+IS  AMI  Y  +GK + +L  + ++ +     ++ T   ++  
Sbjct: 120 EEAESVFRSMGAMRDIISVTAMIGAYVRHGKNDLALDTYWKMRSQGLEPDAFTYAAILGA 179

Query: 321 FYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASW 380
                 L     IH   L+S    N SV  AL T+Y++   ++ ++ LF     K + SW
Sbjct: 180 CSSPDFLLDGKHIHKHILESKHFGNISVRNALITMYAKCGSLKDSKSLFLTMDVKDVVSW 239

Query: 381 NAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKS 440
           NAMIA YT  G  ++A SLF  M      P+  T SSIL ACA    +  G+ +H  + +
Sbjct: 240 NAMIAAYTLYGHDKDAFSLFHRMCTLGHTPDIYTFSSILGACASPKRLEDGRMLHVRITA 299

Query: 441 RNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQL 500
           R F+ +  +   LI M+ +CG++  AR  F  +  K    WNTM++ Y     G +AL L
Sbjct: 300 RGFDRDFAMQNNLISMFTRCGSLESARRYFYSIEKKELGAWNTMLAAYAQFDKGKDALFL 359

Query: 501 FSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILG 560
           +  ML  G  P   TF SV+ +C+  G +REG  I +      GF+        +V++  
Sbjct: 360 YKNMLLEGFTPDRFTFSSVVDSCASLGALREGKFIHECST-SCGFEKDVILGTALVNMYA 418

Query: 561 RAGQLEKALEFIKGLAVEPGPAVWGALLGACMIH 594
           + G L  A +   G++       W A++ A   H
Sbjct: 419 KCGSLADAKKSFDGIS-NKDVVSWSAMIAASAQH 451



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 66/316 (20%), Positives = 138/316 (43%), Gaps = 5/316 (1%)

Query: 29  HAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNEMP 88
           H +I   GF  D +    L    +   +   AR  F+SI K +L  +N ++  ++  +  
Sbjct: 294 HVRITARGFDRDFAMQNNLISMFTRCGSLESARRYFYSIEKKELGAWNTMLAAYAQFDKG 353

Query: 89  KSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAA 148
           K ++  Y ++      TPD FT+S V+ + ++      G  +H  +   G+  D+ +G A
Sbjct: 354 KDALFLYKNMLLE-GFTPDRFTFSSVVDSCASLGALREGKFIHECSTSCGFEKDVILGTA 412

Query: 149 LVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWL 208
           LV++Y K   +  A+K FD +  KD V W++MI+   ++   ++++ +   ++   G   
Sbjct: 413 LVNMYAKCGSLADAKKSFDGISNKDVVSWSAMIAASAQHGHAEEALEL-SHLMNLQGIAQ 471

Query: 209 DSTSVAAVLPAVAEVQELRLGME-IQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELL 267
           +  + ++VL A +    L  G++    L    G         G +    + G ++ AE +
Sbjct: 472 NEVTASSVLHACSHGGRLYEGIDYFMGLSQDFGIERDEENTVGFIDLLGRAGWLKEAEHV 531

Query: 268 FRDI-VRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGH 326
              +  +   ++   ++ G   +G       L ++++A  E  N  + V L  ++   G 
Sbjct: 532 LHTMPFKVSFVALVTLLGGCKVHGDVRRGKALTKRIVA-LEPENPGSYVLLNNMYAAAGR 590

Query: 327 LHLTNCIHSFCLKSGI 342
                 +  +  K G+
Sbjct: 591 WDDVAKLRRYMRKKGV 606



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 44/178 (24%), Positives = 84/178 (47%), Gaps = 3/178 (1%)

Query: 446 NIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEML 505
           + +++  +I MY KC +  +AR++FD +  ++  +W+ ++  Y  +    EAL+++ EM+
Sbjct: 1   DTFLANMIIQMYGKCKSPEDARQVFDRIKQRNAFSWSILVECYVQNAMYQEALEVYKEMV 60

Query: 506 HSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQL 565
              I     T  SVL AC+    V EG  + Q    + GF+        ++ +  + G L
Sbjct: 61  RKEISIDAYTLSSVLAACTKLLDVEEG-RMVQRKAEELGFEKDVVVATSLIHLFAKCGCL 119

Query: 566 EKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFE--LDPENVGYHVLL 621
           E+A    + +          A++GA + H   +LA     K+    L+P+   Y  +L
Sbjct: 120 EEAESVFRSMGAMRDIISVTAMIGAYVRHGKNDLALDTYWKMRSQGLEPDAFTYAAIL 177


>gi|298204516|emb|CBI23791.3| unnamed protein product [Vitis vinifera]
          Length = 615

 Score =  434 bits (1115), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 209/447 (46%), Positives = 291/447 (65%), Gaps = 4/447 (0%)

Query: 342 IVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQ 401
           IV + +   AL   Y +  E+  A  LF+    +++ SW AMI+GYTQNG  E+A+ LF 
Sbjct: 169 IVRDMASWNALIAGYMKEGEIGVAEDLFERMEHRNIVSWTAMISGYTQNGFAEQALGLFD 228

Query: 402 EM--QASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAK 459
           EM    S++ PN VT+ S+L ACAQ  A+  G+ +H+         N  V TAL  MYAK
Sbjct: 229 EMLQDGSEMKPNWVTIVSVLPACAQSAALERGRRIHDFANGIGLHLNSSVQTALAGMYAK 288

Query: 460 CGNIVEARELFDLMSH--KSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFL 517
           C ++VEAR  FD+++   K+ + WNTMI+ Y  HG G+EA+ +F  ML +G++P  VTF+
Sbjct: 289 CYSLVEARCCFDMIAQNGKNLIAWNTMITAYASHGCGVEAVSIFENMLRAGVQPDAVTFM 348

Query: 518 SVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAV 577
            +L  CSH+GL+  G   F  M   H  +P  EHYAC+VD+LGRAG+L +A E I  + +
Sbjct: 349 GLLSGCSHSGLIDAGLNHFNDMGTIHSVEPRVEHYACVVDLLGRAGRLVEAKELISQMPM 408

Query: 578 EPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATV 637
           + GP+VWGALL AC  H++  +A +A+ +LF L+P+N G +VLLSN+Y+    + +   +
Sbjct: 409 QAGPSVWGALLAACRSHRNLEIAELAARRLFVLEPDNSGNYVLLSNLYAEAGMWEEVKKL 468

Query: 638 RQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTET 697
           R ++K + + K+PGC+ IE+ G  H+F   D+ HPQ+  IY  LE L  K++ AG+  +T
Sbjct: 469 RALLKYQGMKKSPGCSWIEINGKSHLFMGADKSHPQAKEIYKFLEALPEKIKMAGYIPDT 528

Query: 698 VTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKV 757
              LHD+ EEEKE  +  HSEKLAIAFGL+ T PG  +R+ KNLR+C DCH ATKFISK+
Sbjct: 529 SFVLHDISEEEKEYNLTTHSEKLAIAFGLLNTRPGVVLRVTKNLRICGDCHAATKFISKI 588

Query: 758 TGRVIVVRDANRFHHFKGGVCSCGDYW 784
             R I+VRD NRFH FK G CSCGDYW
Sbjct: 589 YEREIIVRDLNRFHCFKDGSCSCGDYW 615



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 105/363 (28%), Positives = 166/363 (45%), Gaps = 44/363 (12%)

Query: 209 DSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCG--------- 259
           D+ ++  VL + A++  + +G  +   GL++G     YV   L+  Y KCG         
Sbjct: 106 DNFTLPFVLKSCADLSRVCMGRCVHGQGLRVGLEGDFYVGASLIDMYVKCGVIGDARKLF 165

Query: 260 ----------------------EVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLR 297
                                 E+  AE LF  +   +++S  AMISGYT NG  E +L 
Sbjct: 166 DKMIVRDMASWNALIAGYMKEGEIGVAEDLFERMEHRNIVSWTAMISGYTQNGFAEQALG 225

Query: 298 LFRQLL--ASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTV 355
           LF ++L   S  + N  TIV ++P       L     IH F    G+  NSSV TAL+ +
Sbjct: 226 LFDEMLQDGSEMKPNWVTIVSVLPACAQSAALERGRRIHDFANGIGLHLNSSVQTALAGM 285

Query: 356 YSRLNEMEAARKLFDESSE--KSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPV 413
           Y++   +  AR  FD  ++  K+L +WN MI  Y  +G   EA+S+F+ M  + V P+ V
Sbjct: 286 YAKCYSLVEARCCFDMIAQNGKNLIAWNTMITAYASHGCGVEAVSIFENMLRAGVQPDAV 345

Query: 414 TVSSILSACAQLGAISLG-KWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDL 472
           T   +LS C+  G I  G    +++    + E  +     ++D+  + G +VEA+EL   
Sbjct: 346 TFMGLLSGCSHSGLIDAGLNHFNDMGTIHSVEPRVEHYACVVDLLGRAGRLVEAKELISQ 405

Query: 473 MSHKS-EVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPS---GVTFLSVLYACSHAGL 528
           M  ++    W  +++    H   LE  +L +  L   + P        LS LYA   AG+
Sbjct: 406 MPMQAGPSVWGALLAACRSH-RNLEIAELAARRLFV-LEPDNSGNYVLLSNLYA--EAGM 461

Query: 529 VRE 531
             E
Sbjct: 462 WEE 464



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 102/416 (24%), Positives = 173/416 (41%), Gaps = 84/416 (20%)

Query: 103 ALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSA 162
            L  DNFT  FVL + +      +G  +HG  +  G   D +VGA+L+D+Y K   +  A
Sbjct: 102 GLLGDNFTLPFVLKSCADLSRVCMGRCVHGQGLRVGLEGDFYVGASLIDMYVKCGVIGDA 161

Query: 163 RKVFDKMPEKDTVLWNS-------------------------------MISGLMKNCCFQ 191
           RK+FDKM  +D   WN+                               MISG  +N   +
Sbjct: 162 RKLFDKMIVRDMASWNALIAGYMKEGEIGVAEDLFERMEHRNIVSWTAMISGYTQNGFAE 221

Query: 192 DSIWVFGDMVRNGG----TWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYV 247
            ++ +F +M+++G      W+   ++ +VLPA A+   L  G  I      +G H +  V
Sbjct: 222 QALGLFDEMLQDGSEMKPNWV---TIVSVLPACAQSAALERGRRIHDFANGIGLHLNSSV 278

Query: 248 LTGLVSFYSKCGEVERAELLFRDIVR--PDLISCNAMISGYTCNGKTESSLRLFRQLLAS 305
            T L   Y+KC  +  A   F  I +   +LI+ N MI+ Y  +G    ++ +F  +L +
Sbjct: 279 QTALAGMYAKCYSLVEARCCFDMIAQNGKNLIAWNTMITAYASHGCGVEAVSIFENMLRA 338

Query: 306 AERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAA 365
             + ++ T +GL           L+ C HS  + +G+              +  N+M   
Sbjct: 339 GVQPDAVTFMGL-----------LSGCSHSGLIDAGL--------------NHFNDMGTI 373

Query: 366 RKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQL 425
                 S E  +  +  ++    + G   EA  L  +M    +   P    ++L+AC   
Sbjct: 374 -----HSVEPRVEHYACVVDLLGRAGRLVEAKELISQM---PMQAGPSVWGALLAACRSH 425

Query: 426 GAISLGKWVHELVKSRNF-----ESNIYVSTALIDMYAKCGNIVEARELFDLMSHK 476
             + +     EL   R F      S  YV   L ++YA+ G   E ++L  L+ ++
Sbjct: 426 RNLEIA----ELAARRLFVLEPDNSGNYV--LLSNLYAEAGMWEEVKKLRALLKYQ 475



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 53/155 (34%), Positives = 75/155 (48%), Gaps = 33/155 (21%)

Query: 414 TVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFD-- 471
           T+  +L +CA L  + +G+ VH        E + YV  +LIDMY KCG I +AR+LFD  
Sbjct: 109 TLPFVLKSCADLSRVCMGRCVHGQGLRVGLEGDFYVGASLIDMYVKCGVIGDARKLFDKM 168

Query: 472 -----------------------------LMSHKSEVTWNTMISGYGLHGHGLEALQLFS 502
                                         M H++ V+W  MISGY  +G   +AL LF 
Sbjct: 169 IVRDMASWNALIAGYMKEGEIGVAEDLFERMEHRNIVSWTAMISGYTQNGFAEQALGLFD 228

Query: 503 EMLHSG--IRPSGVTFLSVLYACSHAGLVREGDEI 535
           EML  G  ++P+ VT +SVL AC+ +  +  G  I
Sbjct: 229 EMLQDGSEMKPNWVTIVSVLPACAQSAALERGRRI 263


>gi|222615375|gb|EEE51507.1| hypothetical protein OsJ_32672 [Oryza sativa Japonica Group]
          Length = 1100

 Score =  434 bits (1115), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 224/559 (40%), Positives = 321/559 (57%)

Query: 226  LRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISG 285
            LR G ++    LKL  H + +VLT L+S Y+KCG + RA+ +F ++  P  +   A+I+ 
Sbjct: 542  LRAGEQLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRAQRVFDEMPHPSTVPWTALITA 601

Query: 286  YTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSN 345
            Y   G    ++ + R   A+  R +S T V ++        L     +     + G+  +
Sbjct: 602  YMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARIADLATGETVWRAAEQEGVAQS 661

Query: 346  SSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQA 405
              V TA   +Y +  EM  AR++FD+   K   +W AM+ GY  NG   EA+ LF  MQA
Sbjct: 662  VFVATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAMVGGYASNGHPREALDLFLAMQA 721

Query: 406  SKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVE 465
              + P+   V+  LSAC +LGA+ LG+    +V    F  N  + TALIDMYAKCG+ VE
Sbjct: 722  EGMKPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCGSTVE 781

Query: 466  ARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSH 525
            A  +F  M  K  + WN MI G G+ GH   A  L  +M  SG++ +  TF+ +L +C+H
Sbjct: 782  AWVVFQQMRKKDIIVWNAMILGLGMTGHEKIAFALVGQMEKSGVKLNDNTFIGLLCSCTH 841

Query: 526  AGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWG 585
             GL+++G   F +M   +   P  EHY CMVD+L RAG L++A + +  + +     + G
Sbjct: 842  TGLIQDGRRYFHNMTKLYHISPRIEHYGCMVDLLSRAGLLQEAHQLVDDMPMPANAVILG 901

Query: 586  ALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRK 645
            ALLG C IH++T LA    ++L  L+P N G +V+LSNIYS    +  AA +R  +K + 
Sbjct: 902  ALLGGCKIHRNTELAEHVLKQLILLEPWNSGNYVMLSNIYSNRGRWEDAAKLRLDMKAKG 961

Query: 646  LAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVE 705
            + K P C+ +E  G  H F  GD+ HP S  IY  L++L  +M+  G++  T   + DVE
Sbjct: 962  VEKVPACSWVEFEGKVHEFRVGDKSHPLSDQIYKKLDELGLEMKTMGYEPTTEVVMFDVE 1021

Query: 706  EEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVR 765
            +EEKE  +  HSEKLAIAF L+ T PG  IR+ KNLRVC DCHTA K +S++T R I+VR
Sbjct: 1022 DEEKEHTLVHHSEKLAIAFNLLITGPGETIRVTKNLRVCSDCHTAIKLVSRITHREIIVR 1081

Query: 766  DANRFHHFKGGVCSCGDYW 784
            D NRFH F+ G CSC DYW
Sbjct: 1082 DNNRFHCFRDGSCSCNDYW 1100



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 102/390 (26%), Positives = 171/390 (43%), Gaps = 4/390 (1%)

Query: 105 TPDNFTYSFVLSAASACCDR-SIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSAR 163
            P + T    L +AS        G  LH  ++     ++  V  +L+ LY K   +  A+
Sbjct: 522 NPSHLTIPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRAQ 581

Query: 164 KVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEV 223
           +VFD+MP   TV W ++I+  M     ++++ V  +   NG    DS +   VL A A +
Sbjct: 582 RVFDEMPHPSTVPWTALITAYMDAGDLREAVHVARNAFANGMR-PDSFTAVRVLTACARI 640

Query: 224 QELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMI 283
            +L  G  +     + G    V+V T  V  Y KCGE+ +A  +F  +   D ++  AM+
Sbjct: 641 ADLATGETVWRAAEQEGVAQSVFVATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAMV 700

Query: 284 SGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIV 343
            GY  NG    +L LF  + A   + +   + G +      G L L             +
Sbjct: 701 GGYASNGHPREALDLFLAMQAEGMKPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFL 760

Query: 344 SNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEM 403
            N  + TAL  +Y++      A  +F +  +K +  WNAMI G    G  + A +L  +M
Sbjct: 761 DNPVLGTALIDMYAKCGSTVEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKIAFALVGQM 820

Query: 404 QASKVAPNPVTVSSILSACAQLGAISLG-KWVHELVKSRNFESNIYVSTALIDMYAKCGN 462
           + S V  N  T   +L +C   G I  G ++ H + K  +    I     ++D+ ++ G 
Sbjct: 821 EKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCMVDLLSRAGL 880

Query: 463 IVEARELFDLMSHKSE-VTWNTMISGYGLH 491
           + EA +L D M   +  V    ++ G  +H
Sbjct: 881 LQEAHQLVDDMPMPANAVILGALLGGCKIH 910



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 105/414 (25%), Positives = 182/414 (43%), Gaps = 44/414 (10%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKN---TALTPDNFTYSFVLS 116
           A+ +F  +P P    +  +I  + +    + ++    H+ +N     + PD+FT   VL+
Sbjct: 580 AQRVFDEMPHPSTVPWTALITAYMDAGDLREAV----HVARNAFANGMRPDSFTAVRVLT 635

Query: 117 AASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVL 176
           A +   D + G  +   A   G    +FV  A VDLY K   +  AR+VFDKM  KD V 
Sbjct: 636 ACARIADLATGETVWRAAEQEGVAQSVFVATAAVDLYVKCGEMAKAREVFDKMRHKDAVA 695

Query: 177 WNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLG 236
           W +M+ G   N   ++++ +F  M +  G   D  +VA  L A   +  L LG +   + 
Sbjct: 696 WGAMVGGYASNGHPREALDLFLAM-QAEGMKPDCYAVAGALSACTRLGALDLGRQAIRMV 754

Query: 237 LKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSL 296
               F D+  + T L+  Y+KCG    A ++F+ + + D+I  NAMI G    G  + + 
Sbjct: 755 DWDEFLDNPVLGTALIDMYAKCGSTVEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKIAF 814

Query: 297 RLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVY 356
            L  Q+  S  ++N +T +GL           L +C H+  ++ G     + +T L  + 
Sbjct: 815 ALVGQMEKSGVKLNDNTFIGL-----------LCSCTHTGLIQDGRRYFHN-MTKLYHIS 862

Query: 357 SRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVS 416
            R+                    +  M+   ++ GL +EA  L  +M    +  N V + 
Sbjct: 863 PRIEH------------------YGCMVDLLSRAGLLQEAHQLVDDM---PMPANAVILG 901

Query: 417 SILSACAQLGAISLGKWV-HELVKSRNFESNIYVSTALIDMYAKCGNIVEAREL 469
           ++L  C       L + V  +L+    + S  YV   L ++Y+  G   +A +L
Sbjct: 902 ALLGGCKIHRNTELAEHVLKQLILLEPWNSGNYV--MLSNIYSNRGRWEDAAKL 953


>gi|108863919|gb|ABG22332.1| vegetative storage protein, putative [Oryza sativa Japonica Group]
          Length = 645

 Score =  434 bits (1115), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 224/559 (40%), Positives = 321/559 (57%)

Query: 226 LRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISG 285
           LR G ++    LKL  H + +VLT L+S Y+KCG + RA+ +F ++  P  +   A+I+ 
Sbjct: 87  LRAGEQLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRAQRVFDEMPHPSTVPWTALITA 146

Query: 286 YTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSN 345
           Y   G    ++ + R   A+  R +S T V ++        L     +     + G+  +
Sbjct: 147 YMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARIADLATGETVWRAAEQEGVAQS 206

Query: 346 SSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQA 405
             V TA   +Y +  EM  AR++FD+   K   +W AM+ GY  NG   EA+ LF  MQA
Sbjct: 207 VFVATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAMVGGYASNGHPREALDLFLAMQA 266

Query: 406 SKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVE 465
             + P+   V+  LSAC +LGA+ LG+    +V    F  N  + TALIDMYAKCG+ VE
Sbjct: 267 EGMKPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCGSTVE 326

Query: 466 ARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSH 525
           A  +F  M  K  + WN MI G G+ GH   A  L  +M  SG++ +  TF+ +L +C+H
Sbjct: 327 AWVVFQQMRKKDIIVWNAMILGLGMTGHEKIAFALVGQMEKSGVKLNDNTFIGLLCSCTH 386

Query: 526 AGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWG 585
            GL+++G   F +M   +   P  EHY CMVD+L RAG L++A + +  + +     + G
Sbjct: 387 TGLIQDGRRYFHNMTKLYHISPRIEHYGCMVDLLSRAGLLQEAHQLVDDMPMPANAVILG 446

Query: 586 ALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRK 645
           ALLG C IH++T LA    ++L  L+P N G +V+LSNIYS    +  AA +R  +K + 
Sbjct: 447 ALLGGCKIHRNTELAEHVLKQLILLEPWNSGNYVMLSNIYSNRGRWEDAAKLRLDMKAKG 506

Query: 646 LAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVE 705
           + K P C+ +E  G  H F  GD+ HP S  IY  L++L  +M+  G++  T   + DVE
Sbjct: 507 VEKVPACSWVEFEGKVHEFRVGDKSHPLSDQIYKKLDELGLEMKTMGYEPTTEVVMFDVE 566

Query: 706 EEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVR 765
           +EEKE  +  HSEKLAIAF L+ T PG  IR+ KNLRVC DCHTA K +S++T R I+VR
Sbjct: 567 DEEKEHTLVHHSEKLAIAFNLLITGPGETIRVTKNLRVCSDCHTAIKLVSRITHREIIVR 626

Query: 766 DANRFHHFKGGVCSCGDYW 784
           D NRFH F+ G CSC DYW
Sbjct: 627 DNNRFHCFRDGSCSCNDYW 645



 Score =  136 bits (342), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 102/390 (26%), Positives = 171/390 (43%), Gaps = 4/390 (1%)

Query: 105 TPDNFTYSFVLSAASACCDR-SIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSAR 163
            P + T    L +AS        G  LH  ++     ++  V  +L+ LY K   +  A+
Sbjct: 67  NPSHLTIPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRAQ 126

Query: 164 KVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEV 223
           +VFD+MP   TV W ++I+  M     ++++ V  +   N G   DS +   VL A A +
Sbjct: 127 RVFDEMPHPSTVPWTALITAYMDAGDLREAVHVARNAFAN-GMRPDSFTAVRVLTACARI 185

Query: 224 QELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMI 283
            +L  G  +     + G    V+V T  V  Y KCGE+ +A  +F  +   D ++  AM+
Sbjct: 186 ADLATGETVWRAAEQEGVAQSVFVATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAMV 245

Query: 284 SGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIV 343
            GY  NG    +L LF  + A   + +   + G +      G L L             +
Sbjct: 246 GGYASNGHPREALDLFLAMQAEGMKPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFL 305

Query: 344 SNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEM 403
            N  + TAL  +Y++      A  +F +  +K +  WNAMI G    G  + A +L  +M
Sbjct: 306 DNPVLGTALIDMYAKCGSTVEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKIAFALVGQM 365

Query: 404 QASKVAPNPVTVSSILSACAQLGAISLG-KWVHELVKSRNFESNIYVSTALIDMYAKCGN 462
           + S V  N  T   +L +C   G I  G ++ H + K  +    I     ++D+ ++ G 
Sbjct: 366 EKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCMVDLLSRAGL 425

Query: 463 IVEARELFDLMSHKSE-VTWNTMISGYGLH 491
           + EA +L D M   +  V    ++ G  +H
Sbjct: 426 LQEAHQLVDDMPMPANAVILGALLGGCKIH 455



 Score =  112 bits (281), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 106/414 (25%), Positives = 180/414 (43%), Gaps = 44/414 (10%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKN---TALTPDNFTYSFVLS 116
           A+ +F  +P P    +  +I  +    M    +    H+ +N     + PD+FT   VL+
Sbjct: 125 AQRVFDEMPHPSTVPWTALITAY----MDAGDLREAVHVARNAFANGMRPDSFTAVRVLT 180

Query: 117 AASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVL 176
           A +   D + G  +   A   G    +FV  A VDLY K   +  AR+VFDKM  KD V 
Sbjct: 181 ACARIADLATGETVWRAAEQEGVAQSVFVATAAVDLYVKCGEMAKAREVFDKMRHKDAVA 240

Query: 177 WNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLG 236
           W +M+ G   N   ++++ +F  M +  G   D  +VA  L A   +  L LG +   + 
Sbjct: 241 WGAMVGGYASNGHPREALDLFLAM-QAEGMKPDCYAVAGALSACTRLGALDLGRQAIRMV 299

Query: 237 LKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSL 296
               F D+  + T L+  Y+KCG    A ++F+ + + D+I  NAMI G    G  + + 
Sbjct: 300 DWDEFLDNPVLGTALIDMYAKCGSTVEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKIAF 359

Query: 297 RLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVY 356
            L  Q+  S  ++N +T +GL           L +C H+  ++ G     + +T L  + 
Sbjct: 360 ALVGQMEKSGVKLNDNTFIGL-----------LCSCTHTGLIQDGRRYFHN-MTKLYHIS 407

Query: 357 SRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVS 416
            R+                    +  M+   ++ GL +EA  L  +M    +  N V + 
Sbjct: 408 PRIEH------------------YGCMVDLLSRAGLLQEAHQLVDDM---PMPANAVILG 446

Query: 417 SILSACAQLGAISLGKWV-HELVKSRNFESNIYVSTALIDMYAKCGNIVEAREL 469
           ++L  C       L + V  +L+    + S  YV   L ++Y+  G   +A +L
Sbjct: 447 ALLGGCKIHRNTELAEHVLKQLILLEPWNSGNYV--MLSNIYSNRGRWEDAAKL 498


>gi|302761366|ref|XP_002964105.1| hypothetical protein SELMODRAFT_82024 [Selaginella moellendorffii]
 gi|300167834|gb|EFJ34438.1| hypothetical protein SELMODRAFT_82024 [Selaginella moellendorffii]
          Length = 713

 Score =  434 bits (1115), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 245/661 (37%), Positives = 371/661 (56%), Gaps = 7/661 (1%)

Query: 130 LHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCC 189
           LH          + F+G  LVD Y K   +  A+  F ++   +   WN +++   +N  
Sbjct: 54  LHAQIAARKLDRNTFLGNVLVDAYSKHGSLHGAQLAFGRITLHNAHSWNILMAAYAQNGH 113

Query: 190 FQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLT 249
            + +  +F  M  + G   ++ +++  L A    + L LG ++  L          +V +
Sbjct: 114 PRGAATLFHWMC-SQGVRPNAVTLSTALLACTAARNLALGRKLNELIASEALEIDSHVES 172

Query: 250 GLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERV 309
            L++ Y +C E+E AE  F      D++   AMIS Y  N +T  +L L R++     ++
Sbjct: 173 SLITMYGRCREIEEAERAFDRSPEKDVVCWTAMISAYAHNWRTSRALELVRRMDLEGIKL 232

Query: 310 NSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTA-LSTVYSRLNEMEAARKL 368
              T V L+        L      H      G+  +S+V+   L  +Y +   ++ AR++
Sbjct: 233 GLPTYVSLLDACASTMDLRNGVAFHQRAAAIGLDRSSTVVAGTLVNLYGKCGRVDDARRV 292

Query: 369 FDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAI 428
            D    ++  SW AMIA Y QNG   EAI+LFQ M      P+ +T+ S++ +CA LG +
Sbjct: 293 LDAMPVRTSVSWTAMIAAYAQNGNAAEAINLFQCMDLEGAEPSDITLISVVDSCAVLGTL 352

Query: 429 SLGKWVHELVKSR-NFESNIYVSTALIDMYAKCGNIVEARELFDL--MSHKSEVTWNTMI 485
           SLGK +H  ++S  +F  ++ +  A+I MY KCGN+  ARE+F+   +  +S VTW  MI
Sbjct: 353 SLGKRIHARIRSSPSFSQSLMLLNAVITMYGKCGNLELAREVFECVPLRTRSVVTWTAMI 412

Query: 486 SGYGLHGHGLEALQLFSEML-HSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHG 544
             Y  +G G EA++LF EML   G  P+ VTFLSVL ACSH G + +  E F SM  D G
Sbjct: 413 RAYAQNGVGEEAIELFQEMLIDGGTEPNRVTFLSVLCACSHLGQLEQAWEHFCSMGPDFG 472

Query: 545 FKPLAEHYACMVDILGRAGQLEKALEFI-KGLAVEPGPAVWGALLGACMIHKDTNLARVA 603
             P  +HY C+VD+LGRAG+L +A + + +    E     W A L AC ++ D   ++ A
Sbjct: 473 VPPAGDHYCCLVDLLGRAGRLGEAEKLLLRHKDFEADVVCWIAFLSACQMNGDLERSQRA 532

Query: 604 SEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHV 663
           ++++ EL+PENV   VLLSN+Y+A+      A +R  +K   + K  G + IE+    H 
Sbjct: 533 AKRVSELEPENVAGRVLLSNVYAAKGRRADVARIRNEMKSSGVKKFAGRSWIEINNRVHE 592

Query: 664 FTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIA 723
           F   D  HP+   IY+ LE+L+ +++EAG+  +T   L DV+EE+K  ++  HSE+LA+A
Sbjct: 593 FMVSDVSHPRKLEIYSELERLHREIKEAGYVPDTKMVLRDVDEEKKVQLLGYHSERLAMA 652

Query: 724 FGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDY 783
            G+I+T PGT +R++KNLRVC DCH ATKFIS++ GR I+VRD +RFHHFK GVCSCGDY
Sbjct: 653 LGIISTPPGTTLRVVKNLRVCSDCHAATKFISQIVGRQIIVRDTSRFHHFKDGVCSCGDY 712

Query: 784 W 784
           W
Sbjct: 713 W 713



 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 144/532 (27%), Positives = 239/532 (44%), Gaps = 31/532 (5%)

Query: 10  NLFLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPK 69
           N + SLL   +   ++ + HAQI       +      L    S   +   A+  F  I  
Sbjct: 36  NDYASLLWQCRGLDEVRKLHAQIAARKLDRNTFLGNVLVDAYSKHGSLHGAQLAFGRITL 95

Query: 70  PDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVL 129
            +   +N+++  ++ N  P+ +   + H   +  + P+  T S  L A +A  + ++G  
Sbjct: 96  HNAHSWNILMAAYAQNGHPRGAATLF-HWMCSQGVRPNAVTLSTALLACTAARNLALGRK 154

Query: 130 LHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCC 189
           L+          D  V ++L+ +Y +   ++ A + FD+ PEKD V W +MIS    N  
Sbjct: 155 LNELIASEALEIDSHVESSLITMYGRCREIEEAERAFDRSPEKDVVCWTAMISAYAHNWR 214

Query: 190 FQDSIWVFGDMVRN---GGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVY 246
              ++    ++VR     G  L   +  ++L A A   +LR G+        +G      
Sbjct: 215 TSRAL----ELVRRMDLEGIKLGLPTYVSLLDACASTMDLRNGVAFHQRAAAIGLDRSST 270

Query: 247 VLTG-LVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLAS 305
           V+ G LV+ Y KCG V+ A  +   +     +S  AMI+ Y  NG    ++ LF+ +   
Sbjct: 271 VVAGTLVNLYGKCGRVDDARRVLDAMPVRTSVSWTAMIAAYAQNGNAAEAINLFQCMDLE 330

Query: 306 AERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNS-SVLTALSTVYSRLNEMEA 364
               +  T++ ++      G L L   IH+    S   S S  +L A+ T+Y +   +E 
Sbjct: 331 GAEPSDITLISVVDSCAVLGTLSLGKRIHARIRSSPSFSQSLMLLNAVITMYGKCGNLEL 390

Query: 365 ARKLFD--ESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQAS-KVAPNPVTVSSILSA 421
           AR++F+      +S+ +W AMI  Y QNG+ EEAI LFQEM       PN VT  S+L A
Sbjct: 391 AREVFECVPLRTRSVVTWTAMIRAYAQNGVGEEAIELFQEMLIDGGTEPNRVTFLSVLCA 450

Query: 422 CAQLGAISLGKWVHELVKSRNF----ESNIYVSTALIDMYAKCGNIVEARELFDLMSHK- 476
           C+ LG +    W H      +F      + Y    L+D+  + G + EA +L  L+ HK 
Sbjct: 451 CSHLGQLEQA-WEHFCSMGPDFGVPPAGDHYC--CLVDLLGRAGRLGEAEKL--LLRHKD 505

Query: 477 ---SEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRP---SGVTFLSVLYA 522
                V W   +S   ++G  LE  Q  ++ + S + P   +G   LS +YA
Sbjct: 506 FEADVVCWIAFLSACQMNGD-LERSQRAAKRV-SELEPENVAGRVLLSNVYA 555



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 43/175 (24%), Positives = 86/175 (49%), Gaps = 5/175 (2%)

Query: 416 SSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSH 475
           +S+L  C  L  +   + +H  + +R  + N ++   L+D Y+K G++  A+  F  ++ 
Sbjct: 39  ASLLWQCRGLDEV---RKLHAQIAARKLDRNTFLGNVLVDAYSKHGSLHGAQLAFGRITL 95

Query: 476 KSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEI 535
            +  +WN +++ Y  +GH   A  LF  M   G+RP+ VT  + L AC+ A  +  G ++
Sbjct: 96  HNAHSWNILMAAYAQNGHPRGAATLFHWMCSQGVRPNAVTLSTALLACTAARNLALGRKL 155

Query: 536 FQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGA 590
              +I     +  +   + ++ + GR  ++E+A E     + E     W A++ A
Sbjct: 156 -NELIASEALEIDSHVESSLITMYGRCREIEEA-ERAFDRSPEKDVVCWTAMISA 208


>gi|242045096|ref|XP_002460419.1| hypothetical protein SORBIDRAFT_02g027830 [Sorghum bicolor]
 gi|241923796|gb|EER96940.1| hypothetical protein SORBIDRAFT_02g027830 [Sorghum bicolor]
          Length = 635

 Score =  434 bits (1115), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 214/539 (39%), Positives = 330/539 (61%), Gaps = 1/539 (0%)

Query: 246 YVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLAS 305
           ++L  L+  Y KCG V  A  +F  I   D++S   +I+GY  N     +L L   +L +
Sbjct: 98  FLLNSLIHMYCKCGAVSDARHVFDGIPTRDVVSWTYLITGYAQNDMPAEALGLLPDMLRA 157

Query: 306 AERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAA 365
             R +  T    +      G   +   +H+  +K  +  +  V +AL  +Y+R  +M+ A
Sbjct: 158 RFRPSGFTFTSFLKAAGACGGRGIGEQMHALAVKYNLDEDVYVGSALLDMYARCQQMDMA 217

Query: 366 RKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQL 425
            ++FD    K+  SWNA+IAG+ + G  E  +  F EMQ +       T SS+ SA A++
Sbjct: 218 IRVFDWLDSKNEVSWNALIAGFARKGDGETTLMKFAEMQRNGFGATHFTYSSVFSALARI 277

Query: 426 GAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMI 485
           GA+  G+WVH  +     +   +V+  ++ MYAK G++V+AR++FD +  +  VTWNTM+
Sbjct: 278 GALEQGRWVHAHMIKSGQKLTAFVANTILGMYAKSGSMVDARKVFDRVDQRDLVTWNTML 337

Query: 486 SGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGF 545
           + +  +G G EA+  F E+   GI+ + +TFLSVL ACSH GLV+EG + F  M+ D+  
Sbjct: 338 TAFAQYGLGKEAVAHFEEIRKYGIQLNQITFLSVLTACSHGGLVKEGKQYFD-MMKDYNV 396

Query: 546 KPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASE 605
           +P  +HY   VD+LGRAG L++AL F+  + +EP  AVWGALLGAC +HK+  + + A++
Sbjct: 397 EPEIDHYVSFVDLLGRAGLLKEALIFVFKMPMEPTAAVWGALLGACRMHKNAKIGQYAAD 456

Query: 606 KLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFT 665
            +FELDPE+ G  VLL NIY++   +  AA VR+++K   + K P C+ +E+  + H+F 
Sbjct: 457 HVFELDPEDTGPPVLLYNIYASTGQWDDAARVRKMMKATGVKKEPACSWVEIENSVHMFV 516

Query: 666 SGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFG 725
           + D  HP+S  IY M E++N ++++AG+   T   L  ++E+E+E  ++ HSEK+A+AF 
Sbjct: 517 ADDSTHPKSEEIYRMWEEVNTRIKKAGYVPNTDYVLLHIKEQERETKLQYHSEKIALAFA 576

Query: 726 LIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           LI    G  IRI+KN+R+C DCH+A +++S+V  R IVVRD NRFHHF  G CSCGDYW
Sbjct: 577 LINMPAGATIRIMKNIRICGDCHSAFRYVSEVFKREIVVRDTNRFHHFSNGSCSCGDYW 635



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 96/389 (24%), Positives = 184/389 (47%), Gaps = 2/389 (0%)

Query: 104 LTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSAR 163
           L P    Y  +++A +   + +    +H H   S    D F+  +L+ +Y K   V  AR
Sbjct: 58  LAPTPRVYHSIITACAQSKNLAGARAIHSHLSRSRLAGDGFLLNSLIHMYCKCGAVSDAR 117

Query: 164 KVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEV 223
            VFD +P +D V W  +I+G  +N    +++ +  DM+R         +  + L A    
Sbjct: 118 HVFDGIPTRDVVSWTYLITGYAQNDMPAEALGLLPDMLR-ARFRPSGFTFTSFLKAAGAC 176

Query: 224 QELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMI 283
               +G ++  L +K    + VYV + L+  Y++C +++ A  +F  +   + +S NA+I
Sbjct: 177 GGRGIGEQMHALAVKYNLDEDVYVGSALLDMYARCQQMDMAIRVFDWLDSKNEVSWNALI 236

Query: 284 SGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIV 343
           +G+   G  E++L  F ++  +       T   +       G L     +H+  +KSG  
Sbjct: 237 AGFARKGDGETTLMKFAEMQRNGFGATHFTYSSVFSALARIGALEQGRWVHAHMIKSGQK 296

Query: 344 SNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEM 403
             + V   +  +Y++   M  ARK+FD   ++ L +WN M+  + Q GL +EA++ F+E+
Sbjct: 297 LTAFVANTILGMYAKSGSMVDARKVFDRVDQRDLVTWNTMLTAFAQYGLGKEAVAHFEEI 356

Query: 404 QASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNI 463
           +   +  N +T  S+L+AC+  G +  GK   +++K  N E  I    + +D+  + G +
Sbjct: 357 RKYGIQLNQITFLSVLTACSHGGLVKEGKQYFDMMKDYNVEPEIDHYVSFVDLLGRAGLL 416

Query: 464 VEAR-ELFDLMSHKSEVTWNTMISGYGLH 491
            EA   +F +    +   W  ++    +H
Sbjct: 417 KEALIFVFKMPMEPTAAVWGALLGACRMH 445



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 80/261 (30%), Positives = 127/261 (48%), Gaps = 8/261 (3%)

Query: 284 SGYTCNGKTESSLR----LFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLK 339
           SG  C+  + S LR    L    LA   RV  S I           +L     IHS   +
Sbjct: 35  SGPACSSSSSSGLRELDLLLTGELAPTPRVYHSIITACAQS----KNLAGARAIHSHLSR 90

Query: 340 SGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISL 399
           S +  +  +L +L  +Y +   +  AR +FD    + + SW  +I GY QN +  EA+ L
Sbjct: 91  SRLAGDGFLLNSLIHMYCKCGAVSDARHVFDGIPTRDVVSWTYLITGYAQNDMPAEALGL 150

Query: 400 FQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAK 459
             +M  ++  P+  T +S L A    G   +G+ +H L    N + ++YV +AL+DMYA+
Sbjct: 151 LPDMLRARFRPSGFTFTSFLKAAGACGGRGIGEQMHALAVKYNLDEDVYVGSALLDMYAR 210

Query: 460 CGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSV 519
           C  +  A  +FD +  K+EV+WN +I+G+   G G   L  F+EM  +G   +  T+ SV
Sbjct: 211 CQQMDMAIRVFDWLDSKNEVSWNALIAGFARKGDGETTLMKFAEMQRNGFGATHFTYSSV 270

Query: 520 LYACSHAGLVREGDEIFQSMI 540
             A +  G + +G  +   MI
Sbjct: 271 FSALARIGALEQGRWVHAHMI 291



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 105/472 (22%), Positives = 202/472 (42%), Gaps = 48/472 (10%)

Query: 5   TPQSRNLFLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALF 64
           TP+  +  ++    +K  +     H+ +       D   +  L H      A   AR +F
Sbjct: 61  TPRVYHSIITACAQSKNLAGARAIHSHLSRSRLAGDGFLLNSLIHMYCKCGAVSDARHVF 120

Query: 65  FSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDR 124
             IP  D+  +  +I G++ N+MP  ++     + +     P  FT++  L AA AC  R
Sbjct: 121 DGIPTRDVVSWTYLITGYAQNDMPAEALGLLPDMLR-ARFRPSGFTFTSFLKAAGACGGR 179

Query: 125 SIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGL 184
            IG  +H  A+      D++VG+AL+D+Y +   +  A +VFD +  K+ V WN++I+G 
Sbjct: 180 GIGEQMHALAVKYNLDEDVYVGSALLDMYARCQQMDMAIRVFDWLDSKNEVSWNALIAGF 239

Query: 185 MKNCCFQDSIWVFGDMVRNGGTWLDST--SVAAVLPAVAEVQELRLGMEIQCLGLKLGFH 242
            +    + ++  F +M RNG     +T  + ++V  A+A +  L  G  +    +K G  
Sbjct: 240 ARKGDGETTLMKFAEMQRNG---FGATHFTYSSVFSALARIGALEQGRWVHAHMIKSGQK 296

Query: 243 DHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQL 302
              +V   ++  Y+K G +  A  +F  + + DL++ N M++ +   G  + ++  F ++
Sbjct: 297 LTAFVANTILGMYAKSGSMVDARKVFDRVDQRDLVTWNTMLTAFAQYGLGKEAVAHFEEI 356

Query: 303 LASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEM 362
                ++N  T + +           LT C H   +K G                +  +M
Sbjct: 357 RKYGIQLNQITFLSV-----------LTACSHGGLVKEG---------------KQYFDM 390

Query: 363 EAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSAC 422
                + D + E  +  + + +    + GL +EA+    +M    + P      ++L AC
Sbjct: 391 -----MKDYNVEPEIDHYVSFVDLLGRAGLLKEALIFVFKM---PMEPTAAVWGALLGAC 442

Query: 423 AQLGAISLGKWVHELVKSRNFES--------NIYVSTALIDMYAKCGNIVEA 466
                  +G++  + V   + E         NIY ST   D  A+   +++A
Sbjct: 443 RMHKNAKIGQYAADHVFELDPEDTGPPVLLYNIYASTGQWDDAARVRKMMKA 494


>gi|296082276|emb|CBI21281.3| unnamed protein product [Vitis vinifera]
          Length = 785

 Score =  434 bits (1115), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 247/729 (33%), Positives = 388/729 (53%), Gaps = 44/729 (6%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           AR LF  + +     + ++I G+S     K +   +  +++     PD  T+  +LS   
Sbjct: 97  ARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQMQR-CGTEPDYVTFVTLLSG-- 153

Query: 120 ACCDRSIG---VLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVL 176
            C    +G     +    I  GY S L VG  LVD Y K + +  A ++F +MPE     
Sbjct: 154 -CNGHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRLDLACQLFKEMPE----- 207

Query: 177 WNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLG 236
                                          +DS + AAVL A   + ++ LG +I    
Sbjct: 208 -------------------------------IDSFTFAAVLCANIGLDDIVLGQQIHSFV 236

Query: 237 LKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSL 296
           +K  F  +V+V   L+ FYSK   V  A  LF ++   D +S N +ISGY  +GK + + 
Sbjct: 237 IKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDGVSYNVIISGYAWDGKHKYAF 296

Query: 297 RLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVY 356
            LFR+L  +A          ++ +        +   IH+  + +   S   V  +L  +Y
Sbjct: 297 DLFRELQFTAFDRKQFPFATMLSIASNTLDWEMGRQIHAQTIVTTADSEILVGNSLVDMY 356

Query: 357 SRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVS 416
           ++  + E A  +F   + +S   W AMI+ Y Q G  EE + LF +M+ + V  +  T +
Sbjct: 357 AKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQASVIADQATFA 416

Query: 417 SILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHK 476
           S+L A A + ++SLGK +H  +    F SN++  +AL+D+YAKCG+I +A + F  M  +
Sbjct: 417 SLLRASASIASLSLGKQLHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAVQTFQEMPDR 476

Query: 477 SEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIF 536
           + V+WN MIS Y  +G     L+ F EM+ SG++P  V+FL VL ACSH+GLV EG   F
Sbjct: 477 NIVSWNAMISAYAQNGEAEATLKSFKEMVLSGLQPDSVSFLGVLSACSHSGLVEEGLWHF 536

Query: 537 QSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKD 596
            SM   +   P  EHYA +VD+L R+G+  +A + +  + ++P   +W ++L AC IHK+
Sbjct: 537 NSMTQIYKLDPRREHYASVVDMLCRSGRFNEAEKLMAEMPIDPDEIMWSSVLNACRIHKN 596

Query: 597 TNLARVASEKLFELDP-ENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLI 655
             LAR A+++LF ++   +   +V +SNIY+A   +   + V + ++ R + K P  + +
Sbjct: 597 QELARRAADQLFNMEELRDAAPYVNMSNIYAAAGQWENVSKVHKAMRDRGVKKLPAYSWV 656

Query: 656 EVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKV 715
           E+    H+F++ D+ HPQ   I   ++ L   M E G++ +T  ALH+ +E+ K   +K 
Sbjct: 657 EIKHETHMFSANDRCHPQIEEIRKKIDMLTKTMEELGYKPDTSCALHNEDEKFKVESLKY 716

Query: 716 HSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKG 775
           HSE+LAIAF LI+T  G+ I ++KNLR C+DCH A K ISK+ GR I VRD+ RFHHF+ 
Sbjct: 717 HSERLAIAFALISTPEGSPILVMKNLRACIDCHAAIKVISKIVGREITVRDSTRFHHFRD 776

Query: 776 GVCSCGDYW 784
           G CSCGD+W
Sbjct: 777 GFCSCGDFW 785



 Score =  162 bits (410), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 124/457 (27%), Positives = 215/457 (47%), Gaps = 9/457 (1%)

Query: 135 IVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSI 194
           + +G+  D       V  + K   +  AR++F+KMP K+TV  N MISG +K+    ++ 
Sbjct: 39  VKTGFDPDTSRSNFRVGNFLKNGELSQARQLFEKMPHKNTVSTNMMISGYVKSGNLGEAR 98

Query: 195 WVFGDMV-RNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVS 253
            +F  MV R   TW       + L    E  EL + M+ +C G +  +   V +L+G   
Sbjct: 99  KLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQMQ-RC-GTEPDYVTFVTLLSGCNG 156

Query: 254 FYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSST 313
                   +    + +      LI  N ++  Y  + + + + +LF+++      ++S T
Sbjct: 157 HEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRLDLACQLFKEM----PEIDSFT 212

Query: 314 IVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESS 373
              ++        + L   IHSF +K+  V N  V  AL   YS+ + +  ARKLFDE  
Sbjct: 213 FAAVLCANIGLDDIVLGQQIHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMP 272

Query: 374 EKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKW 433
           E+   S+N +I+GY  +G  + A  LF+E+Q +         +++LS  +      +G+ 
Sbjct: 273 EQDGVSYNVIISGYAWDGKHKYAFDLFRELQFTAFDRKQFPFATMLSIASNTLDWEMGRQ 332

Query: 434 VHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGH 493
           +H        +S I V  +L+DMYAKCG   EA  +F  ++H+S V W  MIS Y   G 
Sbjct: 333 IHAQTIVTTADSEILVGNSLVDMYAKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQKGF 392

Query: 494 GLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYA 553
             E LQLF++M  + +     TF S+L A +    +  G ++  S I   GF       +
Sbjct: 393 YEEGLQLFNKMRQASVIADQATFASLLRASASIASLSLGKQL-HSFIIKSGFMSNVFSGS 451

Query: 554 CMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGA 590
            ++D+  + G ++ A++  + +  +     W A++ A
Sbjct: 452 ALLDVYAKCGSIKDAVQTFQEMP-DRNIVSWNAMISA 487



 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 106/396 (26%), Positives = 190/396 (47%), Gaps = 35/396 (8%)

Query: 27  QTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNE 86
           Q H+ +I   F  ++     L    S   +   AR LF  +P+ D   +NVII G++ + 
Sbjct: 231 QIHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDGVSYNVIISGYAWDG 290

Query: 87  MPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVG 146
             K +   +  L + TA     F ++ +LS AS   D  +G  +H   IV+   S++ VG
Sbjct: 291 KHKYAFDLFREL-QFTAFDRKQFPFATMLSIASNTLDWEMGRQIHAQTIVTTADSEILVG 349

Query: 147 AALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGT 206
            +LVD+Y K    + A  +F  +  +  V W +MIS  ++   +++ + +F  M R    
Sbjct: 350 NSLVDMYAKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKM-RQASV 408

Query: 207 WLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAEL 266
             D  + A++L A A +  L LG ++    +K GF  +V+  + L+  Y+KCG ++ A  
Sbjct: 409 IADQATFASLLRASASIASLSLGKQLHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAVQ 468

Query: 267 LFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGH 326
            F+++   +++S NAMIS Y  NG+ E++L+ F++++ S  + +S + +G+         
Sbjct: 469 TFQEMPDRNIVSWNAMISAYAQNGEAEATLKSFKEMVLSGLQPDSVSFLGV--------- 519

Query: 327 LHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAG 386
             L+ C HS  ++ G+                 N M    KL D   E     + +++  
Sbjct: 520 --LSACSHSGLVEEGLW--------------HFNSMTQIYKL-DPRREH----YASVVDM 558

Query: 387 YTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSAC 422
             ++G   EA  L  EM    + P+ +  SS+L+AC
Sbjct: 559 LCRSGRFNEAEKLMAEM---PIDPDEIMWSSVLNAC 591



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 76/324 (23%), Positives = 144/324 (44%), Gaps = 16/324 (4%)

Query: 27  QTHAQIIIHGFQNDLSTVTKLAHRLSDFKATC----YARALFFSIPKPDLFLFNVIIRGF 82
           Q HAQ I+    +++     + + L D  A C     A  +F ++       +  +I  +
Sbjct: 332 QIHAQTIVTTADSEI----LVGNSLVDMYAKCGKFEEAEMIFTNLTHRSAVPWTAMISAY 387

Query: 83  SNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSD 142
                 +  +  +  +R+ + +  D  T++ +L A+++    S+G  LH   I SG+ S+
Sbjct: 388 VQKGFYEEGLQLFNKMRQASVIA-DQATFASLLRASASIASLSLGKQLHSFIIKSGFMSN 446

Query: 143 LFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVR 202
           +F G+AL+D+Y K   +K A + F +MP+++ V WN+MIS   +N   + ++  F +MV 
Sbjct: 447 VFSGSALLDVYAKCGSIKDAVQTFQEMPDRNIVSWNAMISAYAQNGEAEATLKSFKEMVL 506

Query: 203 NGGTWLDSTSVAAVLPAVAE---VQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCG 259
           + G   DS S   VL A +    V+E            KL      Y    +V    + G
Sbjct: 507 S-GLQPDSVSFLGVLSACSHSGLVEEGLWHFNSMTQIYKLDPRREHYA--SVVDMLCRSG 563

Query: 260 EVERAELLFRDI-VRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLI 318
               AE L  ++ + PD I  +++++    +   E + R   QL    E  +++  V + 
Sbjct: 564 RFNEAEKLMAEMPIDPDEIMWSSVLNACRIHKNQELARRAADQLFNMEELRDAAPYVNMS 623

Query: 319 PVFYPFGHLHLTNCIHSFCLKSGI 342
            ++   G     + +H      G+
Sbjct: 624 NIYAAAGQWENVSKVHKAMRDRGV 647


>gi|125557011|gb|EAZ02547.1| hypothetical protein OsI_24658 [Oryza sativa Indica Group]
          Length = 635

 Score =  434 bits (1115), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 239/609 (39%), Positives = 339/609 (55%), Gaps = 38/609 (6%)

Query: 208 LDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELL 267
           L +  VA +L   A    LR   E+    ++ G      V   L   Y+    ++    L
Sbjct: 33  LTADRVAGLLTGCAT---LRRTGELHAAAVRAGVDGDRAVGFRLQRAYAASDRLDLTVTL 89

Query: 268 FRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHL 327
            R    P  +   + I  ++  G   ++L L  ++L       S T+   +P  +    L
Sbjct: 90  LRLTPDPTTVFYTSAIHAHSSRGLHLAALALLSEMLGRGLIPTSHTLSSSLPACHG---L 146

Query: 328 HLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSE------------- 374
            L   +H++  K  +  +S V TAL  +Y+R  + +AAR LFDE  +             
Sbjct: 147 ALGRALHAYAFKLALAGDSYVATALLGMYARGGDADAARALFDEMPDPHVVPVTAMLTCY 206

Query: 375 ------------------KSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVS 416
                             K    WNAMI GYTQ+G   EA+ LF+ M  S V P+ V + 
Sbjct: 207 AKMGALDDARELFDGMPSKDFICWNAMIDGYTQHGRPNEALRLFRWMLRSGVDPDEVAII 266

Query: 417 SILSACAQLGAISLGKWVHELVK-SRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSH 475
             LSA AQLG    G+W+H  VK SR  + N  V TALIDMY KCG++ +A  +F+ +  
Sbjct: 267 LALSAVAQLGTAESGRWLHSYVKNSRRVQLNARVGTALIDMYCKCGSLEDAVSVFNSIGD 326

Query: 476 KSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEI 535
           K  V WN MI+GY +HG   +AL++FS++   G+ P+ +TF+ +L ACSH+GLV EG + 
Sbjct: 327 KDIVVWNAMINGYAMHGDSRKALEMFSQLRSQGLWPTDITFIGLLNACSHSGLVDEGHQF 386

Query: 536 FQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHK 595
           FQSM  ++   P  EHY CMVD+LGRAG +E+A   ++ + + P   +W +LL AC +HK
Sbjct: 387 FQSMEEEYAIVPKIEHYGCMVDLLGRAGLIEEAFHLVQSMTIAPDTVMWVSLLAACRLHK 446

Query: 596 DTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLI 655
           +  L +  ++ L      N G ++LLSNIY+A  ++ + A VR ++K   + K PGC+ I
Sbjct: 447 NMALGQQIADYLVAGGLANSGMYILLSNIYAAVGNWEEVARVRSMMKASGIQKEPGCSAI 506

Query: 656 EVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKV 715
           EVG   + F +GD  HP++  IYAMLEK+NG ++E G   +T   LHD++E  KE  + V
Sbjct: 507 EVGRKVYEFVAGDMSHPRTDEIYAMLEKMNGIVKEQGHVPQTELVLHDLDEVTKEKALAV 566

Query: 716 HSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKG 775
           HSEKLA+AFGLI+T PG  I+I+KNLR C DCH   K ISK+TGR IV RD NRFHHF  
Sbjct: 567 HSEKLAVAFGLISTAPGETIKIVKNLRACADCHAVLKLISKITGRKIVFRDRNRFHHFVD 626

Query: 776 GVCSCGDYW 784
           G C+CGDYW
Sbjct: 627 GSCTCGDYW 635



 Score =  105 bits (263), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 118/494 (23%), Positives = 197/494 (39%), Gaps = 77/494 (15%)

Query: 15  LLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFL 74
           LL G  T  +  + HA  +  G   D +   +L    +          L    P P    
Sbjct: 41  LLTGCATLRRTGELHAAAVRAGVDGDRAVGFRLQRAYAASDRLDLTVTLLRLTPDPTTVF 100

Query: 75  FNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHA 134
           +   I   S+  +  +++   + +     L P + T S   S+  AC   ++G  LH +A
Sbjct: 101 YTSAIHAHSSRGLHLAALALLSEML-GRGLIPTSHTLS---SSLPACHGLALGRALHAYA 156

Query: 135 IVSGYGSDLFVGAALVDLYF-------------------------------KFSWVKSAR 163
                  D +V  AL+ +Y                                K   +  AR
Sbjct: 157 FKLALAGDSYVATALLGMYARGGDADAARALFDEMPDPHVVPVTAMLTCYAKMGALDDAR 216

Query: 164 KVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLP--AVA 221
           ++FD MP KD + WN+MI G  ++    +++ +F  M+R+G   +D   VA +L   AVA
Sbjct: 217 ELFDGMPSKDFICWNAMIDGYTQHGRPNEALRLFRWMLRSG---VDPDEVAIILALSAVA 273

Query: 222 EVQELRLGMEIQC-LGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCN 280
           ++     G  +   +        +  V T L+  Y KCG +E A  +F  I   D++  N
Sbjct: 274 QLGTAESGRWLHSYVKNSRRVQLNARVGTALIDMYCKCGSLEDAVSVFNSIGDKDIVVWN 333

Query: 281 AMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKS 340
           AMI+GY  +G +  +L +F QL +        T +GL           L  C HS  +  
Sbjct: 334 AMINGYAMHGDSRKALEMFSQLRSQGLWPTDITFIGL-----------LNACSHSGLVDE 382

Query: 341 GIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLF 400
           G         ++   Y+ + ++E                +  M+    + GL EEA  L 
Sbjct: 383 G----HQFFQSMEEEYAIVPKIE---------------HYGCMVDLLGRAGLIEEAFHLV 423

Query: 401 QEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHE-LVKSRNFESNIYVSTALIDMYAK 459
           Q M    +AP+ V   S+L+AC     ++LG+ + + LV      S +Y+   L ++YA 
Sbjct: 424 QSM---TIAPDTVMWVSLLAACRLHKNMALGQQIADYLVAGGLANSGMYI--LLSNIYAA 478

Query: 460 CGNIVEARELFDLM 473
            GN  E   +  +M
Sbjct: 479 VGNWEEVARVRSMM 492


>gi|115470299|ref|NP_001058748.1| Os07g0113500 [Oryza sativa Japonica Group]
 gi|22831309|dbj|BAC16163.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|24414055|dbj|BAC22304.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|113610284|dbj|BAF20662.1| Os07g0113500 [Oryza sativa Japonica Group]
 gi|125598898|gb|EAZ38474.1| hypothetical protein OsJ_22862 [Oryza sativa Japonica Group]
          Length = 634

 Score =  434 bits (1115), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 239/609 (39%), Positives = 339/609 (55%), Gaps = 38/609 (6%)

Query: 208 LDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELL 267
           L +  VA +L   A    LR   E+    ++ G      V   L   Y+    ++    L
Sbjct: 32  LTADRVAGLLTGCAT---LRRTGELHAAAVRAGVDGDRAVGFRLQRAYAASDRLDLTVTL 88

Query: 268 FRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHL 327
            R    P  +   + I  ++  G   ++L L  ++L       S T+   +P  +    L
Sbjct: 89  LRLTPDPTTVFYTSAIHAHSSRGLHLAALALLSEMLGRGLIPTSHTLSSSLPACHG---L 145

Query: 328 HLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSE------------- 374
            L   +H++  K  +  +S V TAL  +Y+R  + +AAR LFDE  +             
Sbjct: 146 ALGRALHAYAFKLALAGDSYVATALLGMYARGGDADAARALFDEMPDPHVVPVTAMLTCY 205

Query: 375 ------------------KSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVS 416
                             K    WNAMI GYTQ+G   EA+ LF+ M  S V P+ V + 
Sbjct: 206 AKMGALDDARELFDGMPSKDFICWNAMIDGYTQHGRPNEALRLFRWMLRSGVDPDEVAII 265

Query: 417 SILSACAQLGAISLGKWVHELVK-SRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSH 475
             LSA AQLG    G+W+H  VK SR  + N  V TALIDMY KCG++ +A  +F+ +  
Sbjct: 266 LALSAVAQLGTAESGRWLHSYVKNSRRVQLNARVGTALIDMYCKCGSLEDAVSVFNSIGD 325

Query: 476 KSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEI 535
           K  V WN MI+GY +HG   +AL++FS++   G+ P+ +TF+ +L ACSH+GLV EG + 
Sbjct: 326 KDIVVWNAMINGYAMHGDSRKALEMFSQLRSQGLWPTDITFIGLLNACSHSGLVDEGHQF 385

Query: 536 FQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHK 595
           FQSM  ++   P  EHY CMVD+LGRAG +E+A   ++ + + P   +W +LL AC +HK
Sbjct: 386 FQSMEEEYAIVPKIEHYGCMVDLLGRAGLIEEAFHLVQSMTIAPDTVMWVSLLAACRLHK 445

Query: 596 DTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLI 655
           +  L +  ++ L      N G ++LLSNIY+A  ++ + A VR ++K   + K PGC+ I
Sbjct: 446 NMALGQQIADYLVAGGLANSGMYILLSNIYAAVGNWEEVARVRSMMKASGIQKEPGCSAI 505

Query: 656 EVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKV 715
           EVG   + F +GD  HP++  IYAMLEK+NG ++E G   +T   LHD++E  KE  + V
Sbjct: 506 EVGRKVYEFVAGDMSHPRTDEIYAMLEKMNGIVKEQGHVPQTELVLHDLDEVTKEKALAV 565

Query: 716 HSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKG 775
           HSEKLA+AFGLI+T PG  I+I+KNLR C DCH   K ISK+TGR IV RD NRFHHF  
Sbjct: 566 HSEKLAVAFGLISTAPGETIKIVKNLRACADCHAVLKLISKITGRKIVFRDRNRFHHFVD 625

Query: 776 GVCSCGDYW 784
           G C+CGDYW
Sbjct: 626 GSCTCGDYW 634



 Score =  105 bits (263), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 118/494 (23%), Positives = 197/494 (39%), Gaps = 77/494 (15%)

Query: 15  LLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFL 74
           LL G  T  +  + HA  +  G   D +   +L    +          L    P P    
Sbjct: 40  LLTGCATLRRTGELHAAAVRAGVDGDRAVGFRLQRAYAASDRLDLTVTLLRLTPDPTTVF 99

Query: 75  FNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHA 134
           +   I   S+  +  +++   + +     L P + T S   S+  AC   ++G  LH +A
Sbjct: 100 YTSAIHAHSSRGLHLAALALLSEML-GRGLIPTSHTLS---SSLPACHGLALGRALHAYA 155

Query: 135 IVSGYGSDLFVGAALVDLYF-------------------------------KFSWVKSAR 163
                  D +V  AL+ +Y                                K   +  AR
Sbjct: 156 FKLALAGDSYVATALLGMYARGGDADAARALFDEMPDPHVVPVTAMLTCYAKMGALDDAR 215

Query: 164 KVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLP--AVA 221
           ++FD MP KD + WN+MI G  ++    +++ +F  M+R+G   +D   VA +L   AVA
Sbjct: 216 ELFDGMPSKDFICWNAMIDGYTQHGRPNEALRLFRWMLRSG---VDPDEVAIILALSAVA 272

Query: 222 EVQELRLGMEIQC-LGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCN 280
           ++     G  +   +        +  V T L+  Y KCG +E A  +F  I   D++  N
Sbjct: 273 QLGTAESGRWLHSYVKNSRRVQLNARVGTALIDMYCKCGSLEDAVSVFNSIGDKDIVVWN 332

Query: 281 AMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKS 340
           AMI+GY  +G +  +L +F QL +        T +GL           L  C HS  +  
Sbjct: 333 AMINGYAMHGDSRKALEMFSQLRSQGLWPTDITFIGL-----------LNACSHSGLVDE 381

Query: 341 GIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLF 400
           G         ++   Y+ + ++E                +  M+    + GL EEA  L 
Sbjct: 382 G----HQFFQSMEEEYAIVPKIE---------------HYGCMVDLLGRAGLIEEAFHLV 422

Query: 401 QEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHE-LVKSRNFESNIYVSTALIDMYAK 459
           Q M    +AP+ V   S+L+AC     ++LG+ + + LV      S +Y+   L ++YA 
Sbjct: 423 QSM---TIAPDTVMWVSLLAACRLHKNMALGQQIADYLVAGGLANSGMYI--LLSNIYAA 477

Query: 460 CGNIVEARELFDLM 473
            GN  E   +  +M
Sbjct: 478 VGNWEEVARVRSMM 491


>gi|15226158|ref|NP_180932.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75101013|sp|P93011.1|PP182_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g33760
 gi|1707020|gb|AAC69141.1| hypothetical protein [Arabidopsis thaliana]
 gi|330253787|gb|AEC08881.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 583

 Score =  433 bits (1114), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 228/587 (38%), Positives = 352/587 (59%), Gaps = 22/587 (3%)

Query: 209 DSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLF 268
           +S +  A++ A   V++L+   ++    +  G+     +LT L++       +    LLF
Sbjct: 8   NSAAYEAIVRAGPRVKQLQ---QVHAHLIVTGYGRSRSLLTKLITLACSARAIAYTHLLF 64

Query: 269 RDIVRPDLISCNAMISGYTCNGKTESSLRL-------FRQLLASAERVNSSTIVGLIPVF 321
             +  PD    N++I       K+ S LRL       +R++L+S    ++ T   +I   
Sbjct: 65  LSVPLPDDFLFNSVI-------KSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSC 117

Query: 322 YPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWN 381
                L +   +H   + SG   ++ V  AL T YS+  +ME AR++FD   EKS+ +WN
Sbjct: 118 ADLSALRIGKGVHCHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWN 177

Query: 382 AMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSR 441
           ++++G+ QNGL +EAI +F +M+ S   P+  T  S+LSACAQ GA+SLG WVH+ + S 
Sbjct: 178 SLVSGFEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISE 237

Query: 442 NFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLF 501
             + N+ + TALI++Y++CG++ +ARE+FD M   +   W  MIS YG HG+G +A++LF
Sbjct: 238 GLDLNVKLGTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELF 297

Query: 502 SEMLHS-GIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILG 560
           ++M    G  P+ VTF++VL AC+HAGLV EG  +++ M   +   P  EH+ CMVD+LG
Sbjct: 298 NKMEDDCGPIPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLG 357

Query: 561 RAGQLEKALEFIKGLAVE---PGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGY 617
           RAG L++A +FI  L        PA+W A+LGAC +H++ +L    +++L  L+P+N G+
Sbjct: 358 RAGFLDEAYKFIHQLDATGKATAPALWTAMLGACKMHRNYDLGVEIAKRLIALEPDNPGH 417

Query: 618 HVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAI 677
           HV+LSNIY+      + + +R  + +  L K  G ++IEV    ++F+ GD+ H ++  I
Sbjct: 418 HVMLSNIYALSGKTDEVSHIRDGMMRNNLRKQVGYSVIEVENKTYMFSMGDESHQETGEI 477

Query: 678 YAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRI 737
           Y  LE L  + +E G+   +   +H VEEEEKE  ++ HSEKLA+AFGL+ T     I I
Sbjct: 478 YRYLETLISRCKEIGYAPVSEEVMHQVEEEEKEFALRYHSEKLAVAFGLLKT-VDVAITI 536

Query: 738 IKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           +KNLR+C DCH+A K+IS V+ R I VRD  RFHHF+ G CSC DYW
Sbjct: 537 VKNLRICEDCHSAFKYISIVSNRQITVRDKLRFHHFQNGSCSCLDYW 583



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 122/432 (28%), Positives = 208/432 (48%), Gaps = 33/432 (7%)

Query: 1   MSMKTPQSRNLFLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYA 60
           M+ K   +   + ++++      QL Q HA +I+ G+    S +TKL       +A  Y 
Sbjct: 1   MTTKVAANSAAYEAIVRAGPRVKQLQQVHAHLIVTGYGRSRSLLTKLITLACSARAIAYT 60

Query: 61  RALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASA 120
             LF S+P PD FLFN +I+  S   +P   + +Y  +  +  ++P N+T++ V+ + + 
Sbjct: 61  HLLFLSVPLPDDFLFNSVIKSTSKLRLPLHCVAYYRRMLSSN-VSPSNYTFTSVIKSCAD 119

Query: 121 CCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSM 180
                IG  +H HA+VSG+G D +V AALV  Y K   ++ AR+VFD+MPEK  V WNS+
Sbjct: 120 LSALRIGKGVHCHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSL 179

Query: 181 ISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLG 240
           +SG  +N    ++I VF  M R  G   DS +  ++L A A+   + LG  +    +  G
Sbjct: 180 VSGFEQNGLADEAIQVFYQM-RESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEG 238

Query: 241 FHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFR 300
              +V + T L++ YS+CG+V +A  +F  +   ++ +  AMIS Y  +G  + ++ LF 
Sbjct: 239 LDLNVKLGTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFN 298

Query: 301 QLLASAERV-NSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRL 359
           ++      + N+ T V +           L+ C H+  ++ G            +VY R 
Sbjct: 299 KMEDDCGPIPNNVTFVAV-----------LSACAHAGLVEEG-----------RSVYKR- 335

Query: 360 NEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSIL 419
             M  + +L        +     M+    + G  +EA     ++ A+  A  P   +++L
Sbjct: 336 --MTKSYRLI-----PGVEHHVCMVDMLGRAGFLDEAYKFIHQLDATGKATAPALWTAML 388

Query: 420 SACAQLGAISLG 431
            AC       LG
Sbjct: 389 GACKMHRNYDLG 400


>gi|449435936|ref|XP_004135750.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like [Cucumis sativus]
          Length = 762

 Score =  433 bits (1114), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 238/685 (34%), Positives = 381/685 (55%), Gaps = 2/685 (0%)

Query: 18  GAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNV 77
           G K+       H  + + G + D+   + L    ++      A+ LF +IP+ D  L+NV
Sbjct: 70  GLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNIPQKDSVLWNV 129

Query: 78  IIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVS 137
           ++ G+  N    ++I  +  +R ++ + P++ T++ VLS  ++     +G  LHG A+  
Sbjct: 130 MLNGYVKNGDSGNAIKIFLEMR-HSEIKPNSVTFACVLSVCASEAMLDLGTQLHGIAVSC 188

Query: 138 GYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVF 197
           G   D  V   L+ +Y K   +++ARK+FD  P+ D V WN +ISG ++N    ++  +F
Sbjct: 189 GLELDSPVANTLLAMYSKCQCLQAARKLFDTSPQSDLVSWNGIISGYVQNGLMGEAEHLF 248

Query: 198 GDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSK 257
             M+ + G   DS + A+ LP V E+  L+   EI    ++      V++ + L+  Y K
Sbjct: 249 RGMI-SAGIKPDSITFASFLPCVNELLSLKHCKEIHGYIIRHAVVLDVFLKSALIDIYFK 307

Query: 258 CGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGL 317
           C +VE A+ +       D + C  MISGY  NGK + +L  FR L+    +  S T   +
Sbjct: 308 CRDVEMAQKILCQSSSFDTVVCTTMISGYVLNGKNKEALEAFRWLVQERMKPTSVTFSSI 367

Query: 318 IPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSL 377
            P F     L+L   +H   +K+ +     V +A+  +Y++   ++ A ++F+  +EK  
Sbjct: 368 FPAFAGLAALNLGKELHGSIIKTKLDEKCHVGSAILDMYAKCGRLDLACRVFNRITEKDA 427

Query: 378 ASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHEL 437
             WN+MI   +QNG   EAI+LF++M       + V++S  LSACA L A+  GK +H L
Sbjct: 428 ICWNSMITSCSQNGRPGEAINLFRQMGMEGTRYDCVSISGALSACANLPALHYGKEIHGL 487

Query: 438 VKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEA 497
           +      S++Y  ++LIDMYAKCGN+  +R +FD M  ++EV+WN++IS YG HG   E 
Sbjct: 488 MIKGPLRSDLYAESSLIDMYAKCGNLNFSRRVFDRMQERNEVSWNSIISAYGNHGDLKEC 547

Query: 498 LQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVD 557
           L LF EML +GI+P  VTFL ++ AC HAG V EG   +  M  ++G     EHYAC+ D
Sbjct: 548 LALFHEMLRNGIQPDHVTFLGIISACGHAGQVDEGIRYYHLMTEEYGIPARMEHYACVAD 607

Query: 558 ILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGY 617
           + GRAG+L++A E I  +   P   VWG LLGAC IH +  LA VAS+ LF+LDP N GY
Sbjct: 608 MFGRAGRLDEAFETINSMPFPPDAGVWGTLLGACHIHGNVELAEVASKHLFDLDPLNSGY 667

Query: 618 HVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAI 677
           +VLL+N+ +    + +   VR ++K+R + K PG + IEV    H+F + D  HP +  I
Sbjct: 668 YVLLANVQAGAGKWRKVLKVRSIMKERGVRKVPGYSWIEVNNATHMFVAADGSHPLTAQI 727

Query: 678 YAMLEKLNGKMREAGFQTETVTALH 702
           Y++L+ L  ++++ G+  +    +H
Sbjct: 728 YSVLDSLLLELKKEGYVPQLYLPMH 752



 Score =  238 bits (607), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 157/540 (29%), Positives = 273/540 (50%), Gaps = 10/540 (1%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           A+ LF+++       +N +IRGF+       ++ FY  +     ++PD +T+ +V+ A  
Sbjct: 11  AKNLFYTLQLGCTSAWNWMIRGFTMMGQFNYALLFYLKML-GAGVSPDKYTFPYVVKACC 69

Query: 120 ACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNS 179
                 +G ++H    + G   D+FVG++L+ LY +   +  A+ +FD +P+KD+VLWN 
Sbjct: 70  GLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNIPQKDSVLWNV 129

Query: 180 MISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKL 239
           M++G +KN    ++I +F +M R+     +S + A VL   A    L LG ++  + +  
Sbjct: 130 MLNGYVKNGDSGNAIKIFLEM-RHSEIKPNSVTFACVLSVCASEAMLDLGTQLHGIAVSC 188

Query: 240 GFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLF 299
           G      V   L++ YSKC  ++ A  LF    + DL+S N +ISGY  NG    +  LF
Sbjct: 189 GLELDSPVANTLLAMYSKCQCLQAARKLFDTSPQSDLVSWNGIISGYVQNGLMGEAEHLF 248

Query: 300 RQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRL 359
           R ++++  + +S T    +P       L     IH + ++  +V +  + +AL  +Y + 
Sbjct: 249 RGMISAGIKPDSITFASFLPCVNELLSLKHCKEIHGYIIRHAVVLDVFLKSALIDIYFKC 308

Query: 360 NEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSIL 419
            ++E A+K+  +SS         MI+GY  NG  +EA+  F+ +   ++ P  VT SSI 
Sbjct: 309 RDVEMAQKILCQSSSFDTVVCTTMISGYVLNGKNKEALEAFRWLVQERMKPTSVTFSSIF 368

Query: 420 SACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEV 479
            A A L A++LGK +H  +     +   +V +A++DMYAKCG +  A  +F+ ++ K  +
Sbjct: 369 PAFAGLAALNLGKELHGSIIKTKLDEKCHVGSAILDMYAKCGRLDLACRVFNRITEKDAI 428

Query: 480 TWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSM 539
            WN+MI+    +G   EA+ LF +M   G R   V+    L AC++   +  G EI   M
Sbjct: 429 CWNSMITSCSQNGRPGEAINLFRQMGMEGTRYDCVSISGALSACANLPALHYGKEIHGLM 488

Query: 540 IHDHGFKPL-AEHYA--CMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKD 596
           I      PL ++ YA   ++D+  + G L  +      +  E     W +++ A   H D
Sbjct: 489 IKG----PLRSDLYAESSLIDMYAKCGNLNFSRRVFDRMQ-ERNEVSWNSIISAYGNHGD 543



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 119/440 (27%), Positives = 220/440 (50%), Gaps = 3/440 (0%)

Query: 152 LYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDST 211
           +Y +   +K A+ +F  +    T  WN MI G      F  ++  +  M+   G   D  
Sbjct: 1   MYVRTGSLKDAKNLFYTLQLGCTSAWNWMIRGFTMMGQFNYALLFYLKML-GAGVSPDKY 59

Query: 212 SVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDI 271
           +   V+ A   ++ +++G  +      +G  + V+V + L+  Y++ G +  A+ LF +I
Sbjct: 60  TFPYVVKACCGLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNI 119

Query: 272 VRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTN 331
            + D +  N M++GY  NG + +++++F ++  S  + NS T   ++ V      L L  
Sbjct: 120 PQKDSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDLGT 179

Query: 332 CIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNG 391
            +H   +  G+  +S V   L  +YS+   ++AARKLFD S +  L SWN +I+GY QNG
Sbjct: 180 QLHGIAVSCGLELDSPVANTLLAMYSKCQCLQAARKLFDTSPQSDLVSWNGIISGYVQNG 239

Query: 392 LTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVST 451
           L  EA  LF+ M ++ + P+ +T +S L    +L ++   K +H  +       ++++ +
Sbjct: 240 LMGEAEHLFRGMISAGIKPDSITFASFLPCVNELLSLKHCKEIHGYIIRHAVVLDVFLKS 299

Query: 452 ALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRP 511
           ALID+Y KC ++  A+++    S    V   TMISGY L+G   EAL+ F  ++   ++P
Sbjct: 300 ALIDIYFKCRDVEMAQKILCQSSSFDTVVCTTMISGYVLNGKNKEALEAFRWLVQERMKP 359

Query: 512 SGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEF 571
           + VTF S+  A +    +  G E+  S+I            + ++D+  + G+L+ A   
Sbjct: 360 TSVTFSSIFPAFAGLAALNLGKELHGSIIKTK-LDEKCHVGSAILDMYAKCGRLDLACRV 418

Query: 572 IKGLAVEPGPAVWGALLGAC 591
              +  E     W +++ +C
Sbjct: 419 FNRI-TEKDAICWNSMITSC 437


>gi|242037917|ref|XP_002466353.1| hypothetical protein SORBIDRAFT_01g006260 [Sorghum bicolor]
 gi|241920207|gb|EER93351.1| hypothetical protein SORBIDRAFT_01g006260 [Sorghum bicolor]
          Length = 862

 Score =  433 bits (1114), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 233/676 (34%), Positives = 388/676 (57%), Gaps = 4/676 (0%)

Query: 18  GAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNV 77
           GA +  +L    A+    G  +D+   + L    SD      AR  F  +P  D  L+NV
Sbjct: 155 GAVSLGRLVHRTARAT--GLASDVYVGSALIKMYSDAGLLRDARDAFDGMPWRDCVLWNV 212

Query: 78  IIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVS 137
           ++ G+        ++  + ++R  +   P+  T +  LS  +A  D   GV LH  A+  
Sbjct: 213 MMDGYIKAGDVGGAVRLFRNMRV-SGCEPNFATLACFLSVCAAEADLLSGVQLHSLAVKC 271

Query: 138 GYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVF 197
           G   ++ V   L+ +Y K   +  A ++F+ +P  D V WN MISG ++N    +++ +F
Sbjct: 272 GLEQEVAVANTLLSMYAKCRCLDDAWRLFELLPRDDLVTWNGMISGCVQNGLLDEALGLF 331

Query: 198 GDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSK 257
            DM+R+G    DS ++ ++LPA+ ++  L+ G E+    ++   H   ++++ LV  Y K
Sbjct: 332 CDMLRSGAR-PDSVTLVSLLPALTDLNGLKQGKEVHGYIIRNCVHMDAFLVSALVDIYFK 390

Query: 258 CGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGL 317
           C +V  A  L+      D++  + +ISGY  NG +E +L++FR LL    + N+ T+  +
Sbjct: 391 CRDVRTARNLYDAARAIDVVIGSTVISGYVLNGMSEKALQMFRYLLEQCIKPNAVTVASV 450

Query: 318 IPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSL 377
           +P       L L   IH + L++       V +AL  +Y++   ++ +  +F + S K  
Sbjct: 451 LPACASISALPLGQEIHGYVLRNAYEGKCYVESALMDMYAKCGRLDLSHYIFSKMSLKDE 510

Query: 378 ASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHEL 437
            +WN+MI+ ++QNG  +EA+ LF++M    +  N VT+SS LSACA L AI  GK +H +
Sbjct: 511 VTWNSMISSFSQNGEPQEALDLFRQMCMEGIKYNNVTISSALSACASLPAIYYGKEIHGV 570

Query: 438 VKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEA 497
           +     +++I+  +ALIDMYAKCGN+  A  +F+ M  K+EV+WN++IS YG HG   E+
Sbjct: 571 IIKGPIKADIFAESALIDMYAKCGNMELALRVFEFMPDKNEVSWNSIISAYGAHGLVKES 630

Query: 498 LQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVD 557
           +     M   G +P  VTFL+++ AC+HAGLV EG ++FQ M  ++   P  EH+ACMVD
Sbjct: 631 VSFLHRMQEEGYKPDHVTFLALISACAHAGLVEEGLQLFQCMTKEYLIAPRMEHFACMVD 690

Query: 558 ILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGY 617
           +  R+G+L+KA++FI  +  +P   +WGALL AC +H++  LA +AS++LF+LDP N GY
Sbjct: 691 LYSRSGRLDKAIQFIADMPFKPDAGIWGALLHACRVHRNVELADIASQELFKLDPGNSGY 750

Query: 618 HVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAI 677
           +VL+SNI +    +   + VR+++K  K+ K PG + ++V  + H+F + D+ HP+S  I
Sbjct: 751 YVLMSNINAVAGRWDGVSKVRRLMKDNKILKIPGYSWVDVNNSSHLFVASDKSHPESEDI 810

Query: 678 YAMLEKLNGKMREAGF 693
           Y  L+ L  ++RE G+
Sbjct: 811 YTSLKALLQELREEGY 826



 Score =  289 bits (740), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 190/606 (31%), Positives = 317/606 (52%), Gaps = 31/606 (5%)

Query: 8   SRNLFLSLLKGAKTQSQLT---QTHAQIIIHGF---QNDLSTVTKL------AHRLSDFK 55
           S +  L+LL+G  +   L    Q HA+ ++ G     N L+  T+L      A R  D  
Sbjct: 31  SADRLLALLRGCVSAPHLPLGLQIHARAVVSGALSNHNHLALHTRLLGMYVLARRFRD-- 88

Query: 56  ATCYARALFFSIPKP---DLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTAL-TPDNFTY 111
               A A+F ++P+        +N +IRGF+       ++ FY  +  + A  +PD  T 
Sbjct: 89  ----AVAVFSALPRAAAGSSLPWNWLIRGFTAAGHHSLAVLFYVKMWTHPAAPSPDAHTL 144

Query: 112 SFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPE 171
            +V+ + +A    S+G L+H  A  +G  SD++VG+AL+ +Y     ++ AR  FD MP 
Sbjct: 145 PYVVKSCAALGAVSLGRLVHRTARATGLASDVYVGSALIKMYSDAGLLRDARDAFDGMPW 204

Query: 172 KDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGME 231
           +D VLWN M+ G +K      ++ +F +M R  G   +  ++A  L   A   +L  G++
Sbjct: 205 RDCVLWNVMMDGYIKAGDVGGAVRLFRNM-RVSGCEPNFATLACFLSVCAAEADLLSGVQ 263

Query: 232 IQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGK 291
           +  L +K G    V V   L+S Y+KC  ++ A  LF  + R DL++ N MISG   NG 
Sbjct: 264 LHSLAVKCGLEQEVAVANTLLSMYAKCRCLDDAWRLFELLPRDDLVTWNGMISGCVQNGL 323

Query: 292 TESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTA 351
            + +L LF  +L S  R +S T+V L+P       L     +H + +++ +  ++ +++A
Sbjct: 324 LDEALGLFCDMLRSGARPDSVTLVSLLPALTDLNGLKQGKEVHGYIIRNCVHMDAFLVSA 383

Query: 352 LSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPN 411
           L  +Y +  ++  AR L+D +    +   + +I+GY  NG++E+A+ +F+ +    + PN
Sbjct: 384 LVDIYFKCRDVRTARNLYDAARAIDVVIGSTVISGYVLNGMSEKALQMFRYLLEQCIKPN 443

Query: 412 PVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFD 471
            VTV+S+L ACA + A+ LG+ +H  V    +E   YV +AL+DMYAKCG +  +  +F 
Sbjct: 444 AVTVASVLPACASISALPLGQEIHGYVLRNAYEGKCYVESALMDMYAKCGRLDLSHYIFS 503

Query: 472 LMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVRE 531
            MS K EVTWN+MIS +  +G   EAL LF +M   GI+ + VT  S L AC+    +  
Sbjct: 504 KMSLKDEVTWNSMISSFSQNGEPQEALDLFRQMCMEGIKYNNVTISSALSACASLPAIYY 563

Query: 532 GDEIFQSMIHDHGFKPL-AEHYA--CMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALL 588
           G EI   +I      P+ A+ +A   ++D+  + G +E AL   + +  +     W +++
Sbjct: 564 GKEIHGVIIK----GPIKADIFAESALIDMYAKCGNMELALRVFEFMP-DKNEVSWNSII 618

Query: 589 GACMIH 594
            A   H
Sbjct: 619 SAYGAH 624


>gi|334186622|ref|NP_680717.2| tetratricopeptide repeat domain-containing protein [Arabidopsis
           thaliana]
 gi|357529479|sp|Q9M4P3.3|PP316_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g16835, mitochondrial; AltName: Full=Protein DYW10;
           Flags: Precursor
 gi|332658412|gb|AEE83812.1| tetratricopeptide repeat domain-containing protein [Arabidopsis
           thaliana]
          Length = 656

 Score =  433 bits (1113), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 237/627 (37%), Positives = 356/627 (56%), Gaps = 48/627 (7%)

Query: 159 VKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLP 218
           +  A +VF  M  K+T+ WNS++ G+ K                      D + +     
Sbjct: 77  IDGALRVFHGMRAKNTITWNSLLIGISK----------------------DPSRMMEAHQ 114

Query: 219 AVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLIS 278
              E+ E                    +    ++S Y +    E+A+  F  +   D  S
Sbjct: 115 LFDEIPE-----------------PDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAAS 157

Query: 279 CNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCL 338
            N MI+GY   G+ E +  LF  ++   E   ++ I G I      G L   +       
Sbjct: 158 WNTMITGYARRGEMEKARELFYSMMEKNEVSWNAMISGYIEC----GDLEKASHFFKVAP 213

Query: 339 KSGIVSNSSVLTALSTVYSRLNEMEAARKLF-DESSEKSLASWNAMIAGYTQNGLTEEAI 397
             G+V+     TA+ T Y +  ++E A  +F D +  K+L +WNAMI+GY +N   E+ +
Sbjct: 214 VRGVVA----WTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGL 269

Query: 398 SLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMY 457
            LF+ M    + PN   +SS L  C++L A+ LG+ +H++V      +++   T+LI MY
Sbjct: 270 KLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMY 329

Query: 458 AKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFL 517
            KCG + +A +LF++M  K  V WN MISGY  HG+  +AL LF EM+ + IRP  +TF+
Sbjct: 330 CKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFV 389

Query: 518 SVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAV 577
           +VL AC+HAGLV  G   F+SM+ D+  +P  +HY CMVD+LGRAG+LE+AL+ I+ +  
Sbjct: 390 AVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMPF 449

Query: 578 EPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATV 637
            P  AV+G LLGAC +HK+  LA  A+EKL +L+ +N   +V L+NIY+++  +   A V
Sbjct: 450 RPHAAVFGTLLGACRVHKNVELAEFAAEKLLQLNSQNAAGYVQLANIYASKNRWEDVARV 509

Query: 638 RQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTET 697
           R+ +K+  + K PG + IE+    H F S D++HP+  +I+  L++L  KM+ AG++ E 
Sbjct: 510 RKRMKESNVVKVPGYSWIEIRNKVHHFRSSDRIHPELDSIHKKLKELEKKMKLAGYKPEL 569

Query: 698 VTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKV 757
             ALH+VEEE+KE ++  HSEKLA+AFG I    G++I++ KNLR+C DCH A KFIS++
Sbjct: 570 EFALHNVEEEQKEKLLLWHSEKLAVAFGCIKLPQGSQIQVFKNLRICGDCHKAIKFISEI 629

Query: 758 TGRVIVVRDANRFHHFKGGVCSCGDYW 784
             R I+VRD  RFHHFK G CSCGDYW
Sbjct: 630 EKREIIVRDTTRFHHFKDGSCSCGDYW 656



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 100/338 (29%), Positives = 172/338 (50%), Gaps = 13/338 (3%)

Query: 142 DLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMV 201
           D F    ++  Y +    + A+  FD+MP KD   WN+MI+G  +    + +  +F  M+
Sbjct: 123 DTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYSMM 182

Query: 202 -RNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGE 260
            +N  +W       A++    E  +L           K+     V   T +++ Y K  +
Sbjct: 183 EKNEVSW------NAMISGYIECGDLEKASHF----FKVAPVRGVVAWTAMITGYMKAKK 232

Query: 261 VERAELLFRDI-VRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIP 319
           VE AE +F+D+ V  +L++ NAMISGY  N + E  L+LFR +L    R NSS +   + 
Sbjct: 233 VELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALL 292

Query: 320 VFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLAS 379
                  L L   IH    KS + ++ + LT+L ++Y +  E+  A KLF+   +K + +
Sbjct: 293 GCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVA 352

Query: 380 WNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLG-KWVHELV 438
           WNAMI+GY Q+G  ++A+ LF+EM  +K+ P+ +T  ++L AC   G +++G  +   +V
Sbjct: 353 WNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMV 412

Query: 439 KSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHK 476
           +    E      T ++D+  + G + EA +L   M  +
Sbjct: 413 RDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMPFR 450



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 102/401 (25%), Positives = 176/401 (43%), Gaps = 54/401 (13%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNN-EMPKSSICFYTHLRKNTALTPDNFTYSFVLSAA 118
           A++ F  +P  D   +N +I G++   EM K+   FY+ + KN        +++ ++S  
Sbjct: 143 AQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYSMMEKNEV------SWNAMISGY 196

Query: 119 SACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMP-EKDTVLW 177
             C D          A V G    +    A++  Y K   V+ A  +F  M   K+ V W
Sbjct: 197 IECGDLEKASHFFKVAPVRG----VVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTW 252

Query: 178 NSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGL 237
           N+MISG ++N   +D + +F  M+  G    +S+ +++ L   +E+  L+LG +I  +  
Sbjct: 253 NAMISGYVENSRPEDGLKLFRAMLEEG-IRPNSSGLSSALLGCSELSALQLGRQIHQIVS 311

Query: 238 KLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLR 297
           K    + V  LT L+S Y KCGE+  A  LF  + + D+++ NAMISGY  +G  + +L 
Sbjct: 312 KSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALC 371

Query: 298 LFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYS 357
           LFR+++ +  R +  T V +           L  C H+  +  G+    S++        
Sbjct: 372 LFREMIDNKIRPDWITFVAV-----------LLACNHAGLVNIGMAYFESMVR------- 413

Query: 358 RLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSS 417
                       D   E     +  M+    + G  EEA+ L + M      P+     +
Sbjct: 414 ------------DYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSM---PFRPHAAVFGT 458

Query: 418 ILSACAQLGAISLGKWVHELVKSRNFE--------SNIYVS 450
           +L AC     + L ++  E +   N +        +NIY S
Sbjct: 459 LLGACRVHKNVELAEFAAEKLLQLNSQNAAGYVQLANIYAS 499



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 54/225 (24%), Positives = 93/225 (41%), Gaps = 24/225 (10%)

Query: 368 LFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGA 427
           L   S +  +   N +IA   ++G  + A+ +F  M+A     N +T +S+L   ++  +
Sbjct: 52  LTKPSDQDQIFPLNKIIARCVRSGDIDGALRVFHGMRAK----NTITWNSLLIGISKDPS 107

Query: 428 --ISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMI 485
             +   +   E+ +   F  NI +S      Y +  N  +A+  FD M  K   +WNTMI
Sbjct: 108 RMMEAHQLFDEIPEPDTFSYNIMLSC-----YVRNVNFEKAQSFFDRMPFKDAASWNTMI 162

Query: 486 SGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGF 545
           +GY   G   +A +LF  M+             V +    +G +  GD   +   H    
Sbjct: 163 TGYARRGEMEKARELFYSMMEKN---------EVSWNAMISGYIECGD--LEKASHFFKV 211

Query: 546 KPLAEHYACMVDILG--RAGQLEKALEFIKGLAVEPGPAVWGALL 588
            P+    A    I G  +A ++E A    K + V      W A++
Sbjct: 212 APVRGVVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMI 256


>gi|15232500|ref|NP_188131.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|218546753|sp|P0C898.1|PP232_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g15130
 gi|332642102|gb|AEE75623.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 689

 Score =  433 bits (1113), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 238/666 (35%), Positives = 368/666 (55%), Gaps = 9/666 (1%)

Query: 127 GVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMK 186
           G  +H + + SG G +L     L+D+Y K      A KVFD MPE++ V W++++SG + 
Sbjct: 25  GGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVL 84

Query: 187 NCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVY 246
           N   + S+ +F +M R G  + +  + +  L A   +  L  G++I    LK+GF   V 
Sbjct: 85  NGDLKGSLSLFSEMGRQG-IYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVE 143

Query: 247 VLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLAS- 305
           V   LV  YSKCG +  AE +FR IV   LIS NAMI+G+   G    +L  F  +  + 
Sbjct: 144 VGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEAN 203

Query: 306 -AERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGI--VSNSSVLTALSTVYSRLNEM 362
             ER +  T+  L+      G ++    IH F ++SG    S++++  +L  +Y +   +
Sbjct: 204 IKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYL 263

Query: 363 EAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSAC 422
            +ARK FD+  EK++ SW+++I GY Q G   EA+ LF+ +Q      +   +SSI+   
Sbjct: 264 FSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVF 323

Query: 423 AQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWN 482
           A    +  GK +  L           V  +++DMY KCG + EA + F  M  K  ++W 
Sbjct: 324 ADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWT 383

Query: 483 TMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHD 542
            +I+GYG HG G +++++F EML   I P  V +L+VL ACSH+G+++EG+E+F  ++  
Sbjct: 384 VVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLET 443

Query: 543 HGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARV 602
           HG KP  EHYAC+VD+LGRAG+L++A   I  + ++P   +W  LL  C +H D  L + 
Sbjct: 444 HGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKE 503

Query: 603 ASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPH 662
             + L  +D +N   +V++SN+Y     + +    R++   + L K  G + +E+    H
Sbjct: 504 VGKILLRIDAKNPANYVMMSNLYGQAGYWNEQGNARELGNIKGLKKEAGMSWVEIEREVH 563

Query: 663 VFTSGDQLHPQSTAIYAMLEKLNGKMREA-GFQTETVTALHDVEEEEKELMMKVHSEKLA 721
            F SG+  HP +  I   L++   ++RE  G+       LHD+++E KE  ++ HSEKLA
Sbjct: 564 FFRSGEDSHPLTPVIQETLKEAERRLREELGYVYGLKHELHDIDDESKEENLRAHSEKLA 623

Query: 722 IAFGLIA---TEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVC 778
           I   L      + G  IR+ KNLRVC+DCH   K +SK+T    VVRDA RFH F+ G C
Sbjct: 624 IGLALATGGLNQKGKTIRVFKNLRVCVDCHEFIKGLSKITKIAYVVRDAVRFHSFEDGCC 683

Query: 779 SCGDYW 784
           SCGDYW
Sbjct: 684 SCGDYW 689



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 125/495 (25%), Positives = 234/495 (47%), Gaps = 9/495 (1%)

Query: 6   PQSRNLFLSLLKGAKTQ---SQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARA 62
           P  R   +S+L+    +    Q  Q H  ++  G   +L T   L       +    A  
Sbjct: 3   PNQRQNLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYK 62

Query: 63  LFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACC 122
           +F S+P+ ++  ++ ++ G   N   K S+  ++ + +   + P+ FT+S  L A     
Sbjct: 63  VFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQ-GIYPNEFTFSTNLKACGLLN 121

Query: 123 DRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMIS 182
               G+ +HG  +  G+   + VG +LVD+Y K   +  A KVF ++ ++  + WN+MI+
Sbjct: 122 ALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIA 181

Query: 183 GLMKNCCFQDSIWVFGDMVR-NGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGF 241
           G +       ++  FG M   N     D  ++ ++L A +    +  G +I    ++ GF
Sbjct: 182 GFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGF 241

Query: 242 H--DHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLF 299
           H      +   LV  Y KCG +  A   F  I    +IS +++I GY   G+   ++ LF
Sbjct: 242 HCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLF 301

Query: 300 RQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRL 359
           ++L     +++S  +  +I VF  F  L     + +  +K      +SVL ++  +Y + 
Sbjct: 302 KRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKC 361

Query: 360 NEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSIL 419
             ++ A K F E   K + SW  +I GY ++GL ++++ +F EM    + P+ V   ++L
Sbjct: 362 GLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVL 421

Query: 420 SACAQLGAISLGKWV-HELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSE 478
           SAC+  G I  G+ +  +L+++   +  +     ++D+  + G + EA+ L D M  K  
Sbjct: 422 SACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPN 481

Query: 479 V-TWNTMISGYGLHG 492
           V  W T++S   +HG
Sbjct: 482 VGIWQTLLSLCRVHG 496



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 53/174 (30%), Positives = 87/174 (50%), Gaps = 2/174 (1%)

Query: 417 SILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHK 476
           SIL  C + G    G  VH  +       N+  S  LIDMY KC   + A ++FD M  +
Sbjct: 11  SILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPER 70

Query: 477 SEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIF 536
           + V+W+ ++SG+ L+G    +L LFSEM   GI P+  TF + L AC     + +G +I 
Sbjct: 71  NVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQI- 129

Query: 537 QSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGA 590
                  GF+ + E    +VD+  + G++ +A +  + + V+     W A++  
Sbjct: 130 HGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRI-VDRSLISWNAMIAG 182


>gi|297835482|ref|XP_002885623.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331463|gb|EFH61882.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 624

 Score =  433 bits (1113), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 216/534 (40%), Positives = 326/534 (61%), Gaps = 1/534 (0%)

Query: 251 LVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVN 310
           L++ Y+KCG +E A  +F  +   D ++   +ISGY+ + +   +L LF Q+L      N
Sbjct: 92  LLNMYAKCGSLEEARKVFDKMPERDFVTWTTLISGYSQHDRPFDALVLFNQMLRFGFSPN 151

Query: 311 SSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFD 370
             T+  +I            + +H FC+K G  SN  V +AL  +Y+R   M+ A+ +FD
Sbjct: 152 EFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFD 211

Query: 371 ESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISL 430
               ++  SWNA+IAG+ +   TE+A+ LFQ M      P+  + +S+  AC+  G +  
Sbjct: 212 ALESRNDVSWNALIAGHARRCGTEKALELFQGMLREGFRPSHFSYASLFGACSSTGFLEQ 271

Query: 431 GKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGL 490
           GKWVH  +     +   +    L+DMYAK G+I +AR++FD ++ +  V+WN++++ Y  
Sbjct: 272 GKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQ 331

Query: 491 HGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAE 550
           HG G EA+  F EM   GIRP+ ++FLSVL ACSH+GL+ EG   ++ M  D G    A 
Sbjct: 332 HGFGNEAVCWFEEMRRGGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKD-GIVLEAW 390

Query: 551 HYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFEL 610
           HY  +VD+LGRAG L +AL FI+ + +EP  A+W ALL AC +HK+T L   A+E +FEL
Sbjct: 391 HYVTIVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFEL 450

Query: 611 DPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQL 670
           DP++ G HV+L NIY++   +  AA VR+ +K+  + K P C+ +E+    H+F + D+ 
Sbjct: 451 DPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDER 510

Query: 671 HPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATE 730
           HPQ   I    E++  K++E G+  +T   +  V+++E+E+ ++ HSEK+A+AF L+ T 
Sbjct: 511 HPQREEIARKWEEVLAKIKELGYVPDTSHVIVHVDQQEREVNLQYHSEKIALAFALLNTP 570

Query: 731 PGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           PG+ I I KN+RVC DCH+A K  SK  GR I+VRD NRFHHFK G CSC DYW
Sbjct: 571 PGSTIHIKKNIRVCGDCHSAIKLASKAVGREIIVRDTNRFHHFKDGACSCKDYW 624



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 101/366 (27%), Positives = 194/366 (53%), Gaps = 2/366 (0%)

Query: 127 GVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMK 186
           G ++HGH I S +  DL +   L+++Y K   ++ ARKVFDKMPE+D V W ++ISG  +
Sbjct: 70  GRIVHGHLIQSIFRHDLVMNNTLLNMYAKCGSLEEARKVFDKMPERDFVTWTTLISGYSQ 129

Query: 187 NCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVY 246
           +    D++ +F  M+R G +  +  ++++V+ A A  +    G ++    +K GF  +V+
Sbjct: 130 HDRPFDALVLFNQMLRFGFS-PNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVH 188

Query: 247 VLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASA 306
           V + L+  Y++ G ++ A+L+F  +   + +S NA+I+G+     TE +L LF+ +L   
Sbjct: 189 VGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRCGTEKALELFQGMLREG 248

Query: 307 ERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAAR 366
            R +  +   L       G L     +H++ +KSG    +     L  +Y++   +  AR
Sbjct: 249 FRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDAR 308

Query: 367 KLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLG 426
           K+FD  +++ + SWN+++  Y Q+G   EA+  F+EM+   + PN ++  S+L+AC+  G
Sbjct: 309 KIFDRLAKRDVVSWNSLLTAYAQHGFGNEAVCWFEEMRRGGIRPNEISFLSVLTACSHSG 368

Query: 427 AISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMS-HKSEVTWNTMI 485
            +  G   +EL+K        +    ++D+  + G++  A    + M    +   W  ++
Sbjct: 369 LLDEGWHYYELMKKDGIVLEAWHYVTIVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALL 428

Query: 486 SGYGLH 491
           +   +H
Sbjct: 429 NACRMH 434



 Score =  136 bits (342), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 83/275 (30%), Positives = 145/275 (52%), Gaps = 10/275 (3%)

Query: 326 HLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIA 385
           H HL   I     +  +V N+++L     +Y++   +E ARK+FD+  E+   +W  +I+
Sbjct: 74  HGHLIQSI----FRHDLVMNNTLLN----MYAKCGSLEEARKVFDKMPERDFVTWTTLIS 125

Query: 386 GYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFES 445
           GY+Q+    +A+ LF +M     +PN  T+SS++ A A       G  +H       F+S
Sbjct: 126 GYSQHDRPFDALVLFNQMLRFGFSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDS 185

Query: 446 NIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEML 505
           N++V +AL+D+Y + G + +A+ +FD +  +++V+WN +I+G+       +AL+LF  ML
Sbjct: 186 NVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRCGTEKALELFQGML 245

Query: 506 HSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQL 565
             G RPS  ++ S+  ACS  G + +G  +   MI   G K +A     ++D+  ++G +
Sbjct: 246 REGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKS-GEKLVAFAGNTLLDMYAKSGSI 304

Query: 566 EKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLA 600
             A +    LA +     W +LL A   H   N A
Sbjct: 305 HDARKIFDRLA-KRDVVSWNSLLTAYAQHGFGNEA 338



 Score =  129 bits (325), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 96/397 (24%), Positives = 182/397 (45%), Gaps = 14/397 (3%)

Query: 6   PQSRNLFLSLLKGAKTQSQLTQ---THAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARA 62
           P  R  + +LLK       LTQ    H  +I   F++DL     L +  +   +   AR 
Sbjct: 48  PVDRRFYNTLLKKCTVFKLLTQGRIVHGHLIQSIFRHDLVMNNTLLNMYAKCGSLEEARK 107

Query: 63  LFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASA-- 120
           +F  +P+ D   +  +I G+S ++ P  ++  +  + +    +P+ FT S V+ AA+A  
Sbjct: 108 VFDKMPERDFVTWTTLISGYSQHDRPFDALVLFNQMLR-FGFSPNEFTLSSVIKAAAAER 166

Query: 121 --CCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWN 178
             CC    G  LHG  +  G+ S++ VG+AL+DLY ++  +  A+ VFD +  ++ V WN
Sbjct: 167 RGCC----GHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWN 222

Query: 179 SMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLK 238
           ++I+G  + C  + ++ +F  M+R G       S A++  A +    L  G  +    +K
Sbjct: 223 ALIAGHARRCGTEKALELFQGMLREGFR-PSHFSYASLFGACSSTGFLEQGKWVHAYMIK 281

Query: 239 LGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRL 298
            G     +    L+  Y+K G +  A  +F  + + D++S N++++ Y  +G    ++  
Sbjct: 282 SGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGNEAVCW 341

Query: 299 FRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSR 358
           F ++     R N  + + ++      G L      +    K GIV  +     +  +  R
Sbjct: 342 FEEMRRGGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVLEAWHYVTIVDLLGR 401

Query: 359 LNEMEAARKLFDESS-EKSLASWNAMIAGYTQNGLTE 394
             ++  A +  +E   E + A W A++     +  TE
Sbjct: 402 AGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTE 438



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 66/227 (29%), Positives = 103/227 (45%), Gaps = 39/227 (17%)

Query: 401 QEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKC 460
            +++ S +  +    +++L  C     ++ G+ VH  +    F  ++ ++  L++MYAKC
Sbjct: 40  NDLEGSYIPVDRRFYNTLLKKCTVFKLLTQGRIVHGHLIQSIFRHDLVMNNTLLNMYAKC 99

Query: 461 GNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVL 520
           G++ EAR++FD M  +  VTW T+ISGY  H    +AL LF++ML  G  P+  T  SV+
Sbjct: 100 GSLEEARKVFDKMPERDFVTWTTLISGYSQHDRPFDALVLFNQMLRFGFSPNEFTLSSVI 159

Query: 521 YACS-----------HAGLVREGDEIFQSMIH-DHGFKPLAEHYACMVD----------- 557
            A +           H   V+ G   F S +H       L   Y  M D           
Sbjct: 160 KAAAAERRGCCGHQLHGFCVKCG---FDSNVHVGSALLDLYTRYGLMDDAQLVFDALESR 216

Query: 558 --------ILGRAGQ--LEKALEFIKGLAVE---PGPAVWGALLGAC 591
                   I G A +   EKALE  +G+  E   P    + +L GAC
Sbjct: 217 NDVSWNALIAGHARRCGTEKALELFQGMLREGFRPSHFSYASLFGAC 263


>gi|357117655|ref|XP_003560579.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g13770, mitochondrial-like [Brachypodium distachyon]
          Length = 614

 Score =  433 bits (1113), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 215/570 (37%), Positives = 346/570 (60%), Gaps = 1/570 (0%)

Query: 215 AVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRP 274
           A + A  E Q L  G ++    +K  +   VY+ T L+  Y +CG ++ A  +   +   
Sbjct: 46  AAITACVERQALGEGRQVHAHMVKARYRPPVYLATRLIILYVRCGALDDARNVLDGMPER 105

Query: 275 DLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIH 334
           +++S  AMISGY+ +G+   +L LF ++L +  + N  T+  ++        +     +H
Sbjct: 106 NVVSWTAMISGYSQSGRHAEALELFIRMLRAGCKANEFTLATVLTSCPVHQSIQQVEQVH 165

Query: 335 SFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTE 394
           S  +K+   S+  V ++L  +Y +   ++ ARK+FD   E+   S  A+I+GY Q GL +
Sbjct: 166 SLVVKTNFESHMFVGSSLLDMYGKSGNIQEARKVFDMLPERDTVSCTAIISGYAQLGLDD 225

Query: 395 EAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALI 454
           EA+ LF+++ +S +  N VT +++L++ + L +++ GK VH L+  +     I +  +LI
Sbjct: 226 EALDLFRQLYSSGMQCNYVTFTTLLTSLSGLASLNYGKQVHGLILRKELPFFIVLQNSLI 285

Query: 455 DMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGV 514
           DMY+KCG ++ +R +FD M  +S ++WN M+ GYG HG G E +QLF  M    ++P  V
Sbjct: 286 DMYSKCGKLLYSRRVFDNMPQRSAISWNAMLMGYGRHGIGQEVVQLFRTMTEE-VKPDSV 344

Query: 515 TFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKG 574
           T L+VL  CSH GLV EG +IF  ++ +        HY C++D+LGR+GQL+KAL+ I+ 
Sbjct: 345 TLLAVLSGCSHGGLVDEGLDIFDLIVKEQNAVIHIGHYGCVIDLLGRSGQLQKALDLIEH 404

Query: 575 LAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQA 634
           +  EP PA+WG+LLGAC +H + ++  V ++KL +++P N G +V+LSNIY+A   +   
Sbjct: 405 MPFEPTPAIWGSLLGACRVHINVSVGEVVAQKLLDMEPGNAGNYVILSNIYAAAGMWKDV 464

Query: 635 ATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQ 694
             VR+++ +  + K P  + I +    H F S ++ HP+   I A ++++   ++ AGF 
Sbjct: 465 FRVRKLMLENTVTKEPAKSWIILDKVIHTFHSSERFHPRKKDINAKIKEVYVDVKAAGFV 524

Query: 695 TETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFI 754
            +    LHDV++E+KE M+  HSEKLAI FGL+ T PG  I+++KNLR+C+DCH   KF+
Sbjct: 525 PDLSCVLHDVDDEQKERMLLGHSEKLAITFGLMNTPPGLTIQVMKNLRICVDCHNFAKFV 584

Query: 755 SKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           SKV GR I +RD NRFH  K G C+CGDYW
Sbjct: 585 SKVYGREISLRDKNRFHLLKDGACTCGDYW 614



 Score =  173 bits (438), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 106/381 (27%), Positives = 198/381 (51%), Gaps = 7/381 (1%)

Query: 116 SAASACCDRSI---GVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEK 172
           +A +AC +R     G  +H H + + Y   +++   L+ LY +   +  AR V D MPE+
Sbjct: 46  AAITACVERQALGEGRQVHAHMVKARYRPPVYLATRLIILYVRCGALDDARNVLDGMPER 105

Query: 173 DTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEI 232
           + V W +MISG  ++    +++ +F  M+R  G   +  ++A VL +    Q ++   ++
Sbjct: 106 NVVSWTAMISGYSQSGRHAEALELFIRMLR-AGCKANEFTLATVLTSCPVHQSIQQVEQV 164

Query: 233 QCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKT 292
             L +K  F  H++V + L+  Y K G ++ A  +F  +   D +SC A+ISGY   G  
Sbjct: 165 HSLVVKTNFESHMFVGSSLLDMYGKSGNIQEARKVFDMLPERDTVSCTAIISGYAQLGLD 224

Query: 293 ESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTAL 352
           + +L LFRQL +S  + N  T   L+        L+    +H   L+  +     +  +L
Sbjct: 225 DEALDLFRQLYSSGMQCNYVTFTTLLTSLSGLASLNYGKQVHGLILRKELPFFIVLQNSL 284

Query: 353 STVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNP 412
             +YS+  ++  +R++FD   ++S  SWNAM+ GY ++G+ +E + LF+ M   +V P+ 
Sbjct: 285 IDMYSKCGKLLYSRRVFDNMPQRSAISWNAMLMGYGRHGIGQEVVQLFRTM-TEEVKPDS 343

Query: 413 VTVSSILSACAQLGAISLGKWVHEL-VKSRNFESNIYVSTALIDMYAKCGNIVEARELFD 471
           VT+ ++LS C+  G +  G  + +L VK +N   +I     +ID+  + G + +A +L +
Sbjct: 344 VTLLAVLSGCSHGGLVDEGLDIFDLIVKEQNAVIHIGHYGCVIDLLGRSGQLQKALDLIE 403

Query: 472 LMSHK-SEVTWNTMISGYGLH 491
            M  + +   W +++    +H
Sbjct: 404 HMPFEPTPAIWGSLLGACRVH 424


>gi|20146256|dbj|BAB89038.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
            sativa Japonica Group]
 gi|125571007|gb|EAZ12522.1| hypothetical protein OsJ_02419 [Oryza sativa Japonica Group]
          Length = 1062

 Score =  433 bits (1113), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 262/772 (33%), Positives = 419/772 (54%), Gaps = 18/772 (2%)

Query: 25   LTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSN 84
            L Q   +++  G  +DL   + L    +       A+ ++  + + +    N +I G   
Sbjct: 297  LDQLFVRVLKSGCSSDLYVGSALVSAFARHGMLDEAKDIYLGLKERNAVTLNGLIAGLVK 356

Query: 85   NEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVL----LHGHAIVSGY- 139
             +  +++   +   R + A+  D  TY  +LSA +       G+     +H H + +G+ 
Sbjct: 357  QQHGEAAAEIFMGARDSAAVNVD--TYVVLLSAIAEFSTAEQGLRKGREVHAHVLRAGHI 414

Query: 140  GSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGD 199
               + V   LV++Y K   +  A +VF  M  +D + WN++I+ L +N   + ++  +  
Sbjct: 415  YRKIAVSNGLVNMYAKCGAIDKACRVFQLMEARDRISWNTIITALDQNGYCEAAMMNYCL 474

Query: 200  MVRNGGTWLDSTSVAAV--LPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSK 257
            M +N    +  ++ AA+  L + A +  L  G ++ C  +K G +    V   LV  Y +
Sbjct: 475  MRQNS---IGPSNFAAISGLSSCAGLGLLAAGQQLHCDAVKWGLYLDTSVSNALVKMYGE 531

Query: 258  CGEVERAELLFRDIVRPDLISCNAMISGY-TCNGKTESSLRLFRQLLASAERVNSSTIVG 316
            CG +     +F  +   D++S N+++    +       S+++F  ++ S    N  T V 
Sbjct: 532  CGRMSECWEIFNSMSAHDVVSWNSIMGVMASSQAPITESVQVFSNMMKSGLVPNKVTFVN 591

Query: 317  LIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDE-SSEK 375
             +    P   L L   IHS  LK G+  +++V  AL + Y++  ++++  +LF   S  +
Sbjct: 592  FLAALTPLSVLELGKQIHSVMLKHGVTEDNAVDNALMSCYAKSGDVDSCERLFSRMSGRR 651

Query: 376  SLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVH 435
               SWN+MI+GY  NG  +EA+     M  S+   +  T S +L+ACA + A+  G  +H
Sbjct: 652  DAISWNSMISGYIYNGHLQEAMDCVCLMMHSEQMMDHCTFSIVLNACASVAALERGMEMH 711

Query: 436  ELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGL 495
                  + ES++ V +AL+DMY+KCG I  A ++F  MS K+E +WN+MISGY  HG G 
Sbjct: 712  AFGLRSHLESDVVVESALVDMYSKCGRIDYASKVFHSMSQKNEFSWNSMISGYARHGLGR 771

Query: 496  EALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACM 555
            +AL++F EM  SG  P  VTF+SVL ACSHAGLV  G + F+ ++ D+G  P  EHY+C+
Sbjct: 772  KALEIFEEMQESGESPDHVTFVSVLSACSHAGLVERGLDYFE-LMEDYGILPRIEHYSCV 830

Query: 556  VDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHK---DTNLARVASEKLFELDP 612
            +D+LGRAG+L+K  E++K + ++P   +W  +L AC   K     +L   AS  L EL+P
Sbjct: 831  IDLLGRAGELDKIQEYMKRMPMKPNTLIWRTVLVACQQSKHRAKIDLGTEASRMLLELEP 890

Query: 613  ENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHP 672
            +N   +VL S  ++A   +   A  R  +K   + K  G + + +    H F +GD+ HP
Sbjct: 891  QNPVNYVLSSKFHAAIGRWEDTAKARAAMKGAAVKKEAGRSWVTLTDGVHTFIAGDRSHP 950

Query: 673  QSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPG 732
             +  IY  L  L  K+R AG+   T   LHD+EEE KE +++ HSEKLA+AF L  +  G
Sbjct: 951  NTKEIYEKLNFLIQKIRNAGYVPLTEYVLHDLEEENKEELLRYHSEKLAVAFVLTRSSSG 1010

Query: 733  TEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
              IRI+KNLRVC DCHTA ++IS++ GR I++RD+ RFHHFK G CSCGDYW
Sbjct: 1011 GPIRIMKNLRVCGDCHTAFRYISQIVGRQIILRDSIRFHHFKDGKCSCGDYW 1062



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 168/628 (26%), Positives = 294/628 (46%), Gaps = 57/628 (9%)

Query: 32  IIIHGF--QNDLSTVTKLAHRLSDFKATC------YARALFFSIPKPDLFLFNVIIRGFS 83
           + +HG   + + ++ T + + L     +C       A+ +F + P  DL  +N ++  ++
Sbjct: 190 VQVHGLVSKTEFTSNTTVCNALISMYGSCSVGPPILAQRVFDTTPVRDLITWNALMSVYA 249

Query: 84  NNEMPKSSICFYTHLR------KNTALTPDNFTYSFVLSAA--SACCDRSIGVL--LHGH 133
                  +IC +T  R          L P   T+  +++A   S+C   S+G+L  L   
Sbjct: 250 KR---GDAICTFTLFRAMQYDDSGIELRPTEHTFGSLITATYLSSC---SLGLLDQLFVR 303

Query: 134 AIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDS 193
            + SG  SDL+VG+ALV  + +   +  A+ ++  + E++ V  N +I+GL+K    + +
Sbjct: 304 VLKSGCSSDLYVGSALVSAFARHGMLDEAKDIYLGLKERNAVTLNGLIAGLVKQQHGEAA 363

Query: 194 IWVFGDMVRNGGTWLDSTSVAAVLPAVAEV----QELRLGMEIQCLGLKLGFHDHVY--- 246
             +F     +    +D+  V  +L A+AE     Q LR G E+    L+ G   H+Y   
Sbjct: 364 AEIFMGARDSAAVNVDTYVV--LLSAIAEFSTAEQGLRKGREVHAHVLRAG---HIYRKI 418

Query: 247 -VLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLR---LFRQL 302
            V  GLV+ Y+KCG +++A  +F+ +   D IS N +I+    NG  E+++    L RQ 
Sbjct: 419 AVSNGLVNMYAKCGAIDKACRVFQLMEARDRISWNTIITALDQNGYCEAAMMNYCLMRQ- 477

Query: 303 LASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEM 362
             S    N + I GL       G L     +H   +K G+  ++SV  AL  +Y     M
Sbjct: 478 -NSIGPSNFAAISGLSSC-AGLGLLAAGQQLHCDAVKWGLYLDTSVSNALVKMYGECGRM 535

Query: 363 EAARKLFDESSEKSLASWNAM--IAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILS 420
               ++F+  S   + SWN++  +   +Q  +T E++ +F  M  S + PN VT  + L+
Sbjct: 536 SECWEIFNSMSAHDVVSWNSIMGVMASSQAPIT-ESVQVFSNMMKSGLVPNKVTFVNFLA 594

Query: 421 ACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSE-V 479
           A   L  + LGK +H ++       +  V  AL+  YAK G++     LF  MS + + +
Sbjct: 595 ALTPLSVLELGKQIHSVMLKHGVTEDNAVDNALMSCYAKSGDVDSCERLFSRMSGRRDAI 654

Query: 480 TWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSM 539
           +WN+MISGY  +GH  EA+     M+HS       TF  VL AC+    +  G E+    
Sbjct: 655 SWNSMISGYIYNGHLQEAMDCVCLMMHSEQMMDHCTFSIVLNACASVAALERGMEMHAFG 714

Query: 540 IHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNL 599
           +  H    +    A +VD+  + G+++ A +    ++ +     W +++     H    L
Sbjct: 715 LRSHLESDVVVESA-LVDMYSKCGRIDYASKVFHSMS-QKNEFSWNSMISGYARH---GL 769

Query: 600 ARVASEKLFELD-----PENVGYHVLLS 622
            R A E   E+      P++V +  +LS
Sbjct: 770 GRKALEIFEEMQESGESPDHVTFVSVLS 797



 Score =  159 bits (401), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 136/481 (28%), Positives = 228/481 (47%), Gaps = 30/481 (6%)

Query: 130 LHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCC 189
           LH   +  G   DLF+   LV+ Y K + + +AR+VFD MP ++ V W  +ISG + +  
Sbjct: 87  LHLEVVKRGLTHDLFLANHLVNSYAKGARLDAARRVFDGMPGRNAVSWTCLISGHVLSGL 146

Query: 190 FQDSIWVFGDMVRNG-GTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGL--KLGFHDHVY 246
            +D+  +F  M+R G G    S +  +VL A  +    RLG  +Q  GL  K  F  +  
Sbjct: 147 PEDAFPLFRAMLREGPGCRPTSFTFGSVLRACQDSGPDRLGFAVQVHGLVSKTEFTSNTT 206

Query: 247 VLTGLVSFYSKC--GEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLA 304
           V   L+S Y  C  G    A+ +F      DLI+ NA++S Y   G    +  LFR    
Sbjct: 207 VCNALISMYGSCSVGPPILAQRVFDTTPVRDLITWNALMSVYAKRGDAICTFTLFR---- 262

Query: 305 SAERVNSSTIVGLIPVFYPFGHL----HLTNC-------IHSFCLKSGIVSNSSVLTALS 353
            A + + S I  L P  + FG L    +L++C       +    LKSG  S+  V +AL 
Sbjct: 263 -AMQYDDSGI-ELRPTEHTFGSLITATYLSSCSLGLLDQLFVRVLKSGCSSDLYVGSALV 320

Query: 354 TVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPV 413
           + ++R   ++ A+ ++    E++  + N +IAG  +    E A  +F   + S  A N  
Sbjct: 321 SAFARHGMLDEAKDIYLGLKERNAVTLNGLIAGLVKQQHGEAAAEIFMGARDS-AAVNVD 379

Query: 414 TVSSILSACAQLG----AISLGKWVH-ELVKSRNFESNIYVSTALIDMYAKCGNIVEARE 468
           T   +LSA A+       +  G+ VH  ++++ +    I VS  L++MYAKCG I +A  
Sbjct: 380 TYVVLLSAIAEFSTAEQGLRKGREVHAHVLRAGHIYRKIAVSNGLVNMYAKCGAIDKACR 439

Query: 469 LFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGL 528
           +F LM  +  ++WNT+I+    +G+   A+  +  M  + I PS    +S L +C+  GL
Sbjct: 440 VFQLMEARDRISWNTIITALDQNGYCEAAMMNYCLMRQNSIGPSNFAAISGLSSCAGLGL 499

Query: 529 VREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALL 588
           +  G ++    +   G          +V + G  G++ +  E    ++       W +++
Sbjct: 500 LAAGQQLHCDAV-KWGLYLDTSVSNALVKMYGECGRMSECWEIFNSMSAHD-VVSWNSIM 557

Query: 589 G 589
           G
Sbjct: 558 G 558


>gi|449488546|ref|XP_004158080.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like [Cucumis sativus]
          Length = 762

 Score =  432 bits (1112), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 239/685 (34%), Positives = 380/685 (55%), Gaps = 2/685 (0%)

Query: 18  GAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNV 77
           G K+       H  + + G + D+   + L    ++      A+ LF +IP+ D  L+NV
Sbjct: 70  GLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNIPQKDSVLWNV 129

Query: 78  IIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVS 137
           ++ G+  N    ++I  +  +R ++ + P++ T++ VLS  ++     +G  LHG A+  
Sbjct: 130 MLNGYVKNGDSGNAIKIFLEMR-HSEIKPNSVTFACVLSVCASEAMLDLGTQLHGIAVGC 188

Query: 138 GYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVF 197
           G   D  V   L+ +Y K   +++ARK+FD +P+ D V WN +ISG ++N    ++  +F
Sbjct: 189 GLELDSPVANTLLAMYSKCQCLQAARKLFDTLPQSDLVSWNGIISGYVQNGLMGEAEHLF 248

Query: 198 GDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSK 257
             M+ + G   DS + A+ LP V E+  L+   EI    ++      V++ + L+  Y K
Sbjct: 249 RGMI-SAGIKPDSITFASFLPCVNELLSLKHCKEIHGYIIRHAVVLDVFLKSALIDIYFK 307

Query: 258 CGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGL 317
           C +VE A+         D + C  MISGY  NGK + +L  FR L+    +  S T   +
Sbjct: 308 CRDVEMAQKNLCQSSSFDTVVCTTMISGYVLNGKNKEALEAFRWLVQERMKPTSVTFSSI 367

Query: 318 IPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSL 377
            P F     L+L   +H   +K+ +     V +A+  +Y++   ++ A ++F+  +EK  
Sbjct: 368 FPAFAGLAALNLGKELHGSIIKTKLDEKCHVGSAILDMYAKCGRLDLACRVFNRITEKDA 427

Query: 378 ASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHEL 437
             WN+MI   +QNG   EAI+LF++M       + V++S  LSACA L A+  GK +H L
Sbjct: 428 ICWNSMITSCSQNGRPGEAINLFRQMGMEGTRYDCVSISGALSACANLPALHYGKEIHGL 487

Query: 438 VKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEA 497
           +      S++Y  ++LIDMYAKCGN+  +R +FD M  K+EV+WN++IS YG HG   E 
Sbjct: 488 MIKGPLRSDLYAESSLIDMYAKCGNLNFSRRVFDRMQEKNEVSWNSIISAYGNHGDLKEC 547

Query: 498 LQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVD 557
           L LF EML +GI+P  VTFL ++ AC HAG V EG   +  M  ++G     EHYAC+ D
Sbjct: 548 LALFHEMLRNGIQPDHVTFLGIISACGHAGQVDEGIRYYHLMTEEYGIPARMEHYACVAD 607

Query: 558 ILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGY 617
           + GRAG+L +A E I  +   P   VWG LLGAC IH +  LA VAS+ LF+LDP N GY
Sbjct: 608 MFGRAGRLHEAFETINSMPFPPDAGVWGTLLGACHIHGNVELAEVASKHLFDLDPLNSGY 667

Query: 618 HVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAI 677
           +VLL+N+ +    + +   VR ++K+R + K PG + IEV    H+F + D  HP +  I
Sbjct: 668 YVLLANVQAGAGKWRKVLKVRSIMKERGVRKVPGYSWIEVNNATHMFVAADGSHPLTAQI 727

Query: 678 YAMLEKLNGKMREAGFQTETVTALH 702
           Y++L+ L  ++++ G+  +    +H
Sbjct: 728 YSVLDSLLLELKKEGYVPQLYLPMH 752



 Score =  238 bits (607), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 157/540 (29%), Positives = 273/540 (50%), Gaps = 10/540 (1%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           A+ LF+++       +N +IRGF+       ++ FY  +     ++PD +T+ +V+ A  
Sbjct: 11  AKNLFYTLQLGCTSAWNWMIRGFTMMGQFNYALLFYLKML-GAGVSPDKYTFPYVVKACC 69

Query: 120 ACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNS 179
                 +G ++H    + G   D+FVG++L+ LY +   +  A+ +FD +P+KD+VLWN 
Sbjct: 70  GLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNIPQKDSVLWNV 129

Query: 180 MISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKL 239
           M++G +KN    ++I +F +M R+     +S + A VL   A    L LG ++  + +  
Sbjct: 130 MLNGYVKNGDSGNAIKIFLEM-RHSEIKPNSVTFACVLSVCASEAMLDLGTQLHGIAVGC 188

Query: 240 GFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLF 299
           G      V   L++ YSKC  ++ A  LF  + + DL+S N +ISGY  NG    +  LF
Sbjct: 189 GLELDSPVANTLLAMYSKCQCLQAARKLFDTLPQSDLVSWNGIISGYVQNGLMGEAEHLF 248

Query: 300 RQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRL 359
           R ++++  + +S T    +P       L     IH + ++  +V +  + +AL  +Y + 
Sbjct: 249 RGMISAGIKPDSITFASFLPCVNELLSLKHCKEIHGYIIRHAVVLDVFLKSALIDIYFKC 308

Query: 360 NEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSIL 419
            ++E A+K   +SS         MI+GY  NG  +EA+  F+ +   ++ P  VT SSI 
Sbjct: 309 RDVEMAQKNLCQSSSFDTVVCTTMISGYVLNGKNKEALEAFRWLVQERMKPTSVTFSSIF 368

Query: 420 SACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEV 479
            A A L A++LGK +H  +     +   +V +A++DMYAKCG +  A  +F+ ++ K  +
Sbjct: 369 PAFAGLAALNLGKELHGSIIKTKLDEKCHVGSAILDMYAKCGRLDLACRVFNRITEKDAI 428

Query: 480 TWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSM 539
            WN+MI+    +G   EA+ LF +M   G R   V+    L AC++   +  G EI   M
Sbjct: 429 CWNSMITSCSQNGRPGEAINLFRQMGMEGTRYDCVSISGALSACANLPALHYGKEIHGLM 488

Query: 540 IHDHGFKPL-AEHYA--CMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKD 596
           I      PL ++ YA   ++D+  + G L  +      +  E     W +++ A   H D
Sbjct: 489 IKG----PLRSDLYAESSLIDMYAKCGNLNFSRRVFDRMQ-EKNEVSWNSIISAYGNHGD 543



 Score =  179 bits (453), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 118/440 (26%), Positives = 218/440 (49%), Gaps = 3/440 (0%)

Query: 152 LYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDST 211
           +Y +   +K A+ +F  +    T  WN MI G      F  ++  +  M+   G   D  
Sbjct: 1   MYVRTGSLKDAKNLFYTLQLGCTSAWNWMIRGFTMMGQFNYALLFYLKML-GAGVSPDKY 59

Query: 212 SVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDI 271
           +   V+ A   ++ +++G  +      +G  + V+V + L+  Y++ G +  A+ LF +I
Sbjct: 60  TFPYVVKACCGLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNI 119

Query: 272 VRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTN 331
            + D +  N M++GY  NG + +++++F ++  S  + NS T   ++ V      L L  
Sbjct: 120 PQKDSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDLGT 179

Query: 332 CIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNG 391
            +H   +  G+  +S V   L  +YS+   ++AARKLFD   +  L SWN +I+GY QNG
Sbjct: 180 QLHGIAVGCGLELDSPVANTLLAMYSKCQCLQAARKLFDTLPQSDLVSWNGIISGYVQNG 239

Query: 392 LTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVST 451
           L  EA  LF+ M ++ + P+ +T +S L    +L ++   K +H  +       ++++ +
Sbjct: 240 LMGEAEHLFRGMISAGIKPDSITFASFLPCVNELLSLKHCKEIHGYIIRHAVVLDVFLKS 299

Query: 452 ALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRP 511
           ALID+Y KC ++  A++     S    V   TMISGY L+G   EAL+ F  ++   ++P
Sbjct: 300 ALIDIYFKCRDVEMAQKNLCQSSSFDTVVCTTMISGYVLNGKNKEALEAFRWLVQERMKP 359

Query: 512 SGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEF 571
           + VTF S+  A +    +  G E+  S+I            + ++D+  + G+L+ A   
Sbjct: 360 TSVTFSSIFPAFAGLAALNLGKELHGSIIKTK-LDEKCHVGSAILDMYAKCGRLDLACRV 418

Query: 572 IKGLAVEPGPAVWGALLGAC 591
              +  E     W +++ +C
Sbjct: 419 FNRI-TEKDAICWNSMITSC 437


>gi|414867547|tpg|DAA46104.1| TPA: hypothetical protein ZEAMMB73_772392 [Zea mays]
          Length = 677

 Score =  432 bits (1112), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 223/608 (36%), Positives = 353/608 (58%), Gaps = 6/608 (0%)

Query: 177 WNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLG 236
           WN ++S   +      ++ VF  +  +     +ST+    L A A + +L     ++   
Sbjct: 76  WNGLLSAHSRAGAPGAALRVFRALPSSARP--NSTTFTLTLTACARLGDLDAAESVRVRA 133

Query: 237 LKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSL 296
              G+   V+V + L+  YS+CG +E A  +F  + R D ++ + M++G+   G+   +L
Sbjct: 134 FAAGYGHDVFVCSALLHLYSRCGAMEEAIRVFDGMPRKDRVAWSTMVAGFVTAGRPVEAL 193

Query: 297 RLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVY 356
            ++ ++       +   +VG+I      G+  +   +H   L+  +  +    T+L ++Y
Sbjct: 194 AMYSRMREHGVSDDEVVMVGVIQACMSTGNARIGASVHGRLLRHCMRMDVVTTTSLVSMY 253

Query: 357 SRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVS 416
           ++   ++ A ++F     ++  +W+A+I+G+ QNG   EA+ LF+E+QA  + P    + 
Sbjct: 254 AKNGHLDVACQVFRMMPYRNDVTWSALISGFAQNGRAVEALDLFRELQADGLQPCSWALV 313

Query: 417 SILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHK 476
           S L ACA +G + LGK +H  +  R  E    + TA++DMY+KCG++  AR+LF+ +S +
Sbjct: 314 SALLACASVGFLKLGKSIHGFIL-RRLEWQCILGTAVLDMYSKCGSLESARKLFNKLSSR 372

Query: 477 SEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIF 536
             V WN +I+  G HG G +AL LF E+  +GI+P   TF S+L A SH+GLV EG   F
Sbjct: 373 DLVLWNAIIACCGTHGCGHDALALFQELNETGIKPDHATFASLLSALSHSGLVEEGKFWF 432

Query: 537 QSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKD 596
             MI + G +P  +HY C+VD+L R+G +E+A + +  +  EP  A+W  LL  C+ +K 
Sbjct: 433 DRMIKEFGIEPAEKHYVCIVDLLARSGLVEEANDMLASMQTEPTIAIWVILLSGCLNNKK 492

Query: 597 TNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIE 656
             L    ++K+ EL PE++G   L+SN+Y+A + + +   +R+++K     K PG +LIE
Sbjct: 493 LELGETIAKKILELRPEDIGVLALVSNLYAAAKKWDKVREIRKLMKDSGSKKVPGYSLIE 552

Query: 657 VGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVH 716
           V GT H F   DQ HPQ   I  M+ KLN +MR+ G+   T    HD++E++   ++  H
Sbjct: 553 VKGTRHAFVMEDQSHPQHREILKMVAKLNSEMRKLGYVPRTEFVYHDLDEDQ---LLSYH 609

Query: 717 SEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGG 776
           SE+LAIAFGL+ T PGT + IIKNLRVC DCH A K+ISK+  R IVVRDA RFHHFK G
Sbjct: 610 SERLAIAFGLLNTSPGTRLVIIKNLRVCGDCHDAIKYISKIVDREIVVRDAKRFHHFKDG 669

Query: 777 VCSCGDYW 784
            CSCGDYW
Sbjct: 670 ACSCGDYW 677



 Score =  175 bits (444), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 145/546 (26%), Positives = 262/546 (47%), Gaps = 17/546 (3%)

Query: 9   RNLFLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIP 68
           R L   L     T + LT+ HA +++   Q+ LS++     R     A   +        
Sbjct: 11  RRLRRVLSSSRTTLATLTRLHALLVVSSSQHILSSLAAAYARAGALDAA-ESTLAASPSS 69

Query: 69  KPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGV 128
              +  +N ++   S    P +++  +  L   ++  P++ T++  L+A +   D     
Sbjct: 70  PSSIAAWNGLLSAHSRAGAPGAALRVFRAL--PSSARPNSTTFTLTLTACARLGDLDAAE 127

Query: 129 LLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNC 188
            +   A  +GYG D+FV +AL+ LY +   ++ A +VFD MP KD V W++M++G +   
Sbjct: 128 SVRVRAFAAGYGHDVFVCSALLHLYSRCGAMEEAIRVFDGMPRKDRVAWSTMVAGFVTAG 187

Query: 189 CFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVL 248
              +++ ++  M R  G   D   +  V+ A       R+G  +    L+      V   
Sbjct: 188 RPVEALAMYSRM-REHGVSDDEVVMVGVIQACMSTGNARIGASVHGRLLRHCMRMDVVTT 246

Query: 249 TGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAER 308
           T LVS Y+K G ++ A  +FR +   + ++ +A+ISG+  NG+   +L LFR+L A   +
Sbjct: 247 TSLVSMYAKNGHLDVACQVFRMMPYRNDVTWSALISGFAQNGRAVEALDLFRELQADGLQ 306

Query: 309 VNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKL 368
             S  +V  +      G L L   IH F L+  +     + TA+  +YS+   +E+ARKL
Sbjct: 307 PCSWALVSALLACASVGFLKLGKSIHGFILRR-LEWQCILGTAVLDMYSKCGSLESARKL 365

Query: 369 FDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAI 428
           F++ S + L  WNA+IA    +G   +A++LFQE+  + + P+  T +S+LSA +  G +
Sbjct: 366 FNKLSSRDLVLWNAIIACCGTHGCGHDALALFQELNETGIKPDHATFASLLSALSHSGLV 425

Query: 429 SLGK-WVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVT-WNTMIS 486
             GK W   ++K    E        ++D+ A+ G + EA ++   M  +  +  W  ++S
Sbjct: 426 EEGKFWFDRMIKEFGIEPAEKHYVCIVDLLARSGLVEEANDMLASMQTEPTIAIWVILLS 485

Query: 487 GYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSV---LYACSHA-GLVREGDEIFQSMIHD 542
           G  L+   LE  +  ++ +   +RP  +  L++   LYA +     VRE     + ++ D
Sbjct: 486 GC-LNNKKLELGETIAKKILE-LRPEDIGVLALVSNLYAAAKKWDKVRE----IRKLMKD 539

Query: 543 HGFKPL 548
            G K +
Sbjct: 540 SGSKKV 545


>gi|356525712|ref|XP_003531467.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
           chloroplastic-like [Glycine max]
          Length = 691

 Score =  432 bits (1112), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 223/584 (38%), Positives = 347/584 (59%), Gaps = 1/584 (0%)

Query: 201 VRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGE 260
           + + G  + +++  A++ A   ++ +R    +    +  GF   +YV+  ++  + KCG 
Sbjct: 109 LEHDGYGVGASTYDALVSACVGLRSIRGVKRVFNYMINSGFEPDLYVMNRVLFMHVKCGL 168

Query: 261 VERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPV 320
           +  A  LF ++   D+ S   M+ G    G    + RLF  +        S T   +I  
Sbjct: 169 MLDARKLFDEMPEKDVASWMTMVGGLVDTGNFSEAFRLFLCMWKEFNDGRSRTFATMIRA 228

Query: 321 FYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASW 380
               G + +   IHS  LK G+  +  V  AL  +YS+   +E A  +FD+  EK+   W
Sbjct: 229 SAGLGLVQVGKQIHSCALKRGVGDDHFVSCALIDMYSKCGSIEDAHCVFDQMPEKTTVGW 288

Query: 381 NAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKS 440
           N++IA Y  +G +EEA+SL+ EM+ S    +  T+S ++  CA+L ++   K  H  +  
Sbjct: 289 NSIIASYALHGYSEEALSLYFEMRDSGTTVDHFTISIVIRICARLASLEHAKQAHAALVR 348

Query: 441 RNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQL 500
             F ++I  +TAL+D Y+K G + +AR +F+ M HK+ ++WN +I+GYG HG G EA+++
Sbjct: 349 HGFATDIVANTALVDFYSKWGRMEDARHVFNRMRHKNVISWNALIAGYGNHGQGQEAVEM 408

Query: 501 FSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILG 560
           F +ML  G+ P+ VTFL+VL ACS++GL + G EIF SM  DH  KP A HYACM+++LG
Sbjct: 409 FEQMLQEGVTPTHVTFLAVLSACSYSGLSQRGWEIFYSMKRDHKVKPRAMHYACMIELLG 468

Query: 561 RAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVL 620
           R   L++A   I+    +P   +W ALL AC +HK+  L ++A+EKL+ ++PE +  +++
Sbjct: 469 RESLLDEAYALIRTAPFKPTANMWAALLTACRMHKNLELGKLAAEKLYGMEPEKLCNYIV 528

Query: 621 LSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAM 680
           L N+Y++     +AA + Q +KK+ L   P C+ +EV   P+ F  GD+ H Q+  IY  
Sbjct: 529 LLNLYNSSGKLKEAAGILQTLKKKGLRMLPACSWVEVKKQPYAFLCGDKSHSQTKEIYQK 588

Query: 681 LEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKN 740
           ++ L  ++ + G+  E  T L DV+EEE+ + +K HSEKLAIAFGLI T   T ++I + 
Sbjct: 589 VDNLMVEICKHGYAEENETLLPDVDEEEQRI-LKYHSEKLAIAFGLINTPHWTPLQITQG 647

Query: 741 LRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
            RVC DCH+A K I+ VTGR IVVRDA+RFHHF+ G CSCGDYW
Sbjct: 648 HRVCGDCHSAIKLIAMVTGREIVVRDASRFHHFRNGSCSCGDYW 691



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 115/413 (27%), Positives = 206/413 (49%), Gaps = 12/413 (2%)

Query: 133 HAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQD 192
           + I SG+  DL+V   ++ ++ K   +  ARK+FD+MPEKD   W +M+ GL+    F +
Sbjct: 143 YMINSGFEPDLYVMNRVLFMHVKCGLMLDARKLFDEMPEKDVASWMTMVGGLVDTGNFSE 202

Query: 193 SIWVFGDMVR--NGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTG 250
           +  +F  M +  N G    S + A ++ A A +  +++G +I    LK G  D  +V   
Sbjct: 203 AFRLFLCMWKEFNDGR---SRTFATMIRASAGLGLVQVGKQIHSCALKRGVGDDHFVSCA 259

Query: 251 LVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVN 310
           L+  YSKCG +E A  +F  +     +  N++I+ Y  +G +E +L L+ ++  S   V+
Sbjct: 260 LIDMYSKCGSIEDAHCVFDQMPEKTTVGWNSIIASYALHGYSEEALSLYFEMRDSGTTVD 319

Query: 311 SSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFD 370
             TI  +I +      L      H+  ++ G  ++    TAL   YS+   ME AR +F+
Sbjct: 320 HFTISIVIRICARLASLEHAKQAHAALVRHGFATDIVANTALVDFYSKWGRMEDARHVFN 379

Query: 371 ESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISL 430
               K++ SWNA+IAGY  +G  +EA+ +F++M    V P  VT  ++LSAC+  G    
Sbjct: 380 RMRHKNVISWNALIAGYGNHGQGQEAVEMFEQMLQEGVTPTHVTFLAVLSACSYSGLSQR 439

Query: 431 GKW--VHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVT-WNTMISG 487
           G W   + + +    +        +I++  +   + EA  L      K     W  +++ 
Sbjct: 440 G-WEIFYSMKRDHKVKPRAMHYACMIELLGRESLLDEAYALIRTAPFKPTANMWAALLTA 498

Query: 488 YGLHGHGLEALQLFSEMLHSGIRPSGV-TFLSVLYACSHAGLVREGDEIFQSM 539
             +H + LE  +L +E L+ G+ P  +  ++ +L   + +G ++E   I Q++
Sbjct: 499 CRMHKN-LELGKLAAEKLY-GMEPEKLCNYIVLLNLYNSSGKLKEAAGILQTL 549



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 106/449 (23%), Positives = 196/449 (43%), Gaps = 44/449 (9%)

Query: 32  IIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSN----NEM 87
           +I  GF+ DL  + ++            AR LF  +P+ D+  +  ++ G  +    +E 
Sbjct: 144 MINSGFEPDLYVMNRVLFMHVKCGLMLDARKLFDEMPEKDVASWMTMVGGLVDTGNFSEA 203

Query: 88  PKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGA 147
            +  +C +       + T     ++ ++ A++      +G  +H  A+  G G D FV  
Sbjct: 204 FRLFLCMWKEFNDGRSRT-----FATMIRASAGLGLVQVGKQIHSCALKRGVGDDHFVSC 258

Query: 148 ALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTW 207
           AL+D+Y K   ++ A  VFD+MPEK TV WNS+I+    +   ++++ ++ +M R+ GT 
Sbjct: 259 ALIDMYSKCGSIEDAHCVFDQMPEKTTVGWNSIIASYALHGYSEEALSLYFEM-RDSGTT 317

Query: 208 LDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELL 267
           +D  +++ V+   A +  L    +     ++ GF   +   T LV FYSK G +E A  +
Sbjct: 318 VDHFTISIVIRICARLASLEHAKQAHAALVRHGFATDIVANTALVDFYSKWGRMEDARHV 377

Query: 268 FRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHL 327
           F  +   ++IS NA+I+GY  +G+ + ++ +F Q+L            G+ P    F   
Sbjct: 378 FNRMRHKNVISWNALIAGYGNHGQGQEAVEMFEQMLQE----------GVTPTHVTF--- 424

Query: 328 HLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGY 387
                + S C  SG+             YS            D   +     +  MI   
Sbjct: 425 ---LAVLSACSYSGLSQR-----GWEIFYSMKR---------DHKVKPRAMHYACMIELL 467

Query: 388 TQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNI 447
            +  L +EA +L   ++ +   P     +++L+AC     + LGK   E +     E  +
Sbjct: 468 GRESLLDEAYAL---IRTAPFKPTANMWAALLTACRMHKNLELGKLAAEKLYGMEPE-KL 523

Query: 448 YVSTALIDMYAKCGNIVEARELFDLMSHK 476
                L+++Y   G + EA  +   +  K
Sbjct: 524 CNYIVLLNLYNSSGKLKEAAGILQTLKKK 552



 Score = 69.7 bits (169), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 52/206 (25%), Positives = 96/206 (46%), Gaps = 2/206 (0%)

Query: 27  QTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNE 86
           Q H+  +  G  +D      L    S   +   A  +F  +P+     +N II  ++ + 
Sbjct: 240 QIHSCALKRGVGDDHFVSCALIDMYSKCGSIEDAHCVFDQMPEKTTVGWNSIIASYALHG 299

Query: 87  MPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVG 146
             + ++  Y  +R ++  T D+FT S V+   +           H   +  G+ +D+   
Sbjct: 300 YSEEALSLYFEMR-DSGTTVDHFTISIVIRICARLASLEHAKQAHAALVRHGFATDIVAN 358

Query: 147 AALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGT 206
            ALVD Y K+  ++ AR VF++M  K+ + WN++I+G   +   Q+++ +F  M++ G T
Sbjct: 359 TALVDFYSKWGRMEDARHVFNRMRHKNVISWNALIAGYGNHGQGQEAVEMFEQMLQEGVT 418

Query: 207 WLDSTSVAAVLPAVAEVQELRLGMEI 232
               T + AVL A +     + G EI
Sbjct: 419 PTHVTFL-AVLSACSYSGLSQRGWEI 443


>gi|62318827|dbj|BAD93880.1| hypothetical protein [Arabidopsis thaliana]
 gi|62318835|dbj|BAD93890.1| hypothetical protein [Arabidopsis thaliana]
          Length = 635

 Score =  432 bits (1112), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 243/674 (36%), Positives = 375/674 (55%), Gaps = 43/674 (6%)

Query: 115 LSAASACCDRSIGVLLHGHAIVSGYGSD-LFVGAALVDLYFKFS-WVKSARKVFDKMPEK 172
           LS  ++C +      +HG  I  G  +D  F G  ++      S  +  AR++    PE 
Sbjct: 1   LSLLNSCKNLRALTQIHGLFIKYGVDTDSYFTGKLILHCAISISDALPYARRLLLCFPEP 60

Query: 173 DTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEI 232
           D  ++N+++ G  ++    +S+ VF +M+R G  + DS S A V+ AV   + LR G ++
Sbjct: 61  DAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQM 120

Query: 233 QCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKT 292
            C  LK G   H++V T L+  Y  CG VE A  +F ++ +P+L++ NA+I+        
Sbjct: 121 HCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRGNDV 180

Query: 293 ESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTAL 352
             +  +F ++L                                       V N +    +
Sbjct: 181 AGAREIFDKML---------------------------------------VRNHTSWNVM 201

Query: 353 STVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNP 412
              Y +  E+E+A+++F E   +   SW+ MI G   NG   E+   F+E+Q + ++PN 
Sbjct: 202 LAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNE 261

Query: 413 VTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDL 472
           V+++ +LSAC+Q G+   GK +H  V+   +   + V+ ALIDMY++CGN+  AR +F+ 
Sbjct: 262 VSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEG 321

Query: 473 MSHKS-EVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVRE 531
           M  K   V+W +MI+G  +HG G EA++LF+EM   G+ P G++F+S+L+ACSHAGL+ E
Sbjct: 322 MQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEE 381

Query: 532 GDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGAC 591
           G++ F  M   +  +P  EHY CMVD+ GR+G+L+KA +FI  + + P   VW  LLGAC
Sbjct: 382 GEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQMPIPPTAIVWRTLLGAC 441

Query: 592 MIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPG 651
             H +  LA    ++L ELDP N G  VLLSN Y+    +   A++R+ +  +++ K   
Sbjct: 442 SSHGNIELAEQVKQRLNELDPNNSGDLVLLSNAYATAGKWKDVASIRKSMIVQRIKKTTA 501

Query: 652 CTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMR-EAGFQTETVTALHDVEEEEKE 710
            +L+EVG T + FT+G++        +  L+++  +++ EAG+  E  +AL+DVEEEEKE
Sbjct: 502 WSLVEVGKTMYKFTAGEKKKGIDIEAHEKLKEIILRLKDEAGYTPEVASALYDVEEEEKE 561

Query: 711 LMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRF 770
             +  HSEKLA+AF L     G  IRI+KNLR+C DCH   K  SKV G  I+VRD NRF
Sbjct: 562 DQVSKHSEKLALAFALARLSKGANIRIVKNLRICRDCHAVMKLTSKVYGVEILVRDRNRF 621

Query: 771 HHFKGGVCSCGDYW 784
           H FK G CSC DYW
Sbjct: 622 HSFKDGSCSCRDYW 635



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 155/537 (28%), Positives = 244/537 (45%), Gaps = 54/537 (10%)

Query: 13  LSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKL----AHRLSDFKATCYARALFFSIP 68
           LSLL   K    LTQ H   I +G   D     KL    A  +SD  A  YAR L    P
Sbjct: 1   LSLLNSCKNLRALTQIHGLFIKYGVDTDSYFTGKLILHCAISISD--ALPYARRLLLCFP 58

Query: 69  KPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGV 128
           +PD F+FN ++RG+S ++ P +S+  +  + +   + PD+F+++FV+ A         G 
Sbjct: 59  EPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGF 118

Query: 129 LLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNC 188
            +H  A+  G  S LFVG  L+ +Y     V+ ARKVFD+M + + V WN++I+   +  
Sbjct: 119 QMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRGN 178

Query: 189 CFQDSIWVFGDM-VRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYV 247
               +  +F  M VRN  +W                                        
Sbjct: 179 DVAGAREIFDKMLVRNHTSW---------------------------------------- 198

Query: 248 LTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAE 307
              +++ Y K GE+E A+ +F ++   D +S + MI G   NG    S   FR+L  +  
Sbjct: 199 -NVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGM 257

Query: 308 RVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARK 367
             N  ++ G++      G       +H F  K+G     SV  AL  +YSR   +  AR 
Sbjct: 258 SPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARL 317

Query: 368 LFDESSEKS-LASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLG 426
           +F+   EK  + SW +MIAG   +G  EEA+ LF EM A  V P+ ++  S+L AC+  G
Sbjct: 318 VFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAG 377

Query: 427 AISLGK-WVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMS-HKSEVTWNTM 484
            I  G+ +  E+ +  + E  I     ++D+Y + G + +A +    M    + + W T+
Sbjct: 378 LIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQMPIPPTAIVWRTL 437

Query: 485 ISGYGLHGHGLEALQLFSEMLHSGIRPSG-VTFLSVLYACSHAGLVREGDEIFQSMI 540
           +     HG+   A Q+   +       SG +  LS  YA   AG  ++   I +SMI
Sbjct: 438 LGACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSNAYAT--AGKWKDVASIRKSMI 492


>gi|15227067|ref|NP_178398.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|218546779|sp|Q8LK93.2|PP145_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g02980
 gi|3461822|gb|AAC32916.1| hypothetical protein [Arabidopsis thaliana]
 gi|330250557|gb|AEC05651.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 603

 Score =  432 bits (1112), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 218/581 (37%), Positives = 337/581 (58%), Gaps = 5/581 (0%)

Query: 208 LDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKC---GEVERA 264
           +D+ +    +  +++   LR  M+IQ   +K    D V  +  L++F ++      +  A
Sbjct: 24  IDTVNTQNPILLISKCNSLRELMQIQAYAIKSHIED-VSFVAKLINFCTESPTESSMSYA 82

Query: 265 ELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPF 324
             LF  +  PD++  N+M  GY+          LF ++L      ++ T   L+      
Sbjct: 83  RHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVA 142

Query: 325 GHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMI 384
             L     +H   +K G+  N  V   L  +Y+   ++++AR +FD   E  +  +NAMI
Sbjct: 143 KALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMI 202

Query: 385 AGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFE 444
            GY +     EA+SLF+EMQ   + PN +T+ S+LS+CA LG++ LGKW+H+  K  +F 
Sbjct: 203 TGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFC 262

Query: 445 SNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEM 504
             + V+TALIDM+AKCG++ +A  +F+ M +K    W+ MI  Y  HG   +++ +F  M
Sbjct: 263 KYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERM 322

Query: 505 LHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQ 564
               ++P  +TFL +L ACSH G V EG + F  M+   G  P  +HY  MVD+L RAG 
Sbjct: 323 RSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGN 382

Query: 565 LEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNI 624
           LE A EFI  L + P P +W  LL AC  H + +LA   SE++FELD  + G +V+LSN+
Sbjct: 383 LEDAYEFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYVILSNL 442

Query: 625 YSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKL 684
           Y+  + +    ++R+V+K RK  K PGC+ IEV    H F SGD +   +T ++  L+++
Sbjct: 443 YARNKKWEYVDSLRKVMKDRKAVKVPGCSSIEVNNVVHEFFSGDGVKSATTKLHRALDEM 502

Query: 685 NGKMREAGFQTETVTALH-DVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRV 743
             +++ +G+  +T   +H ++ ++EKE+ ++ HSEKLAI FGL+ T PGT IR++KNLRV
Sbjct: 503 VKELKLSGYVPDTSMVVHANMNDQEKEITLRYHSEKLAITFGLLNTPPGTTIRVVKNLRV 562

Query: 744 CLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           C DCH A K IS + GR +V+RD  RFHHF+ G CSCGD+W
Sbjct: 563 CRDCHNAAKLISLIFGRKVVLRDVQRFHHFEDGKCSCGDFW 603



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 109/446 (24%), Positives = 201/446 (45%), Gaps = 54/446 (12%)

Query: 3   MKTPQSRNLFLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDF---KATCY 59
           + T  ++N  L L+    +  +L Q  A  I    + D+S V KL +  ++     +  Y
Sbjct: 24  IDTVNTQNPIL-LISKCNSLRELMQIQAYAIKSHIE-DVSFVAKLINFCTESPTESSMSY 81

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           AR LF ++ +PD+ +FN + RG+S    P      +  + ++  L PDN+T+  +L A +
Sbjct: 82  ARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGIL-PDNYTFPSLLKACA 140

Query: 120 ACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNS 179
                  G  LH  ++  G   +++V   L+++Y +   V SAR VFD++ E   V +N+
Sbjct: 141 VAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNA 200

Query: 180 MISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVA--AVLPAVAEVQELRLGMEIQCLGL 237
           MI+G  +     +++ +F +M    G +L    +   +VL + A +  L LG  I     
Sbjct: 201 MITGYARRNRPNEALSLFREM---QGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAK 257

Query: 238 KLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLR 297
           K  F  +V V T L+  ++KCG ++ A  +F  +   D  + +AMI  Y  +GK E S+ 
Sbjct: 258 KHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSML 317

Query: 298 LFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYS 357
           +F ++ +   + +  T +GL           L  C H+                      
Sbjct: 318 MFERMRSENVQPDEITFLGL-----------LNACSHT---------------------- 344

Query: 358 RLNEMEAARKLFDESSEK-----SLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNP 412
               +E  RK F +   K     S+  + +M+   ++ G  E+A     ++    ++P P
Sbjct: 345 --GRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLP---ISPTP 399

Query: 413 VTVSSILSACAQLGAISLGKWVHELV 438
           +    +L+AC+    + L + V E +
Sbjct: 400 MLWRILLAACSSHNNLDLAEKVSERI 425


>gi|302141697|emb|CBI18900.3| unnamed protein product [Vitis vinifera]
          Length = 637

 Score =  432 bits (1112), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 213/535 (39%), Positives = 325/535 (60%), Gaps = 1/535 (0%)

Query: 251 LVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLF-RQLLASAERV 309
           LVS Y K G  E A+ LF ++   DL+S N+++SG +  G   + L  F R    S  + 
Sbjct: 103 LVSMYFKLGYDEDAQRLFDEMPNKDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQP 162

Query: 310 NSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLF 369
           N  T++ ++      G L     +H   +K G+   + V+ +L  +Y +L  ++AA +LF
Sbjct: 163 NEVTLLSVVSACADMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLF 222

Query: 370 DESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAIS 429
           +E   +SL SWN+M+  +  NG  E+ + LF  M+ + + P+  T+ ++L AC   G   
Sbjct: 223 EEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTGLGR 282

Query: 430 LGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYG 489
             + +H  +    F ++I ++TAL+++YAK G +  + ++F+ +  +  + W  M++GY 
Sbjct: 283 QAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIFEEIKDRDRIAWTAMLAGYA 342

Query: 490 LHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLA 549
           +H  G EA++LF  M+  G+    VTF  +L ACSH+GLV EG + F+ M   +  +P  
Sbjct: 343 VHACGREAIKLFDLMVKEGVEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVYRVEPRL 402

Query: 550 EHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFE 609
           +HY+CMVD+LGR+G+LE A E IK + +EP   VWGALLGAC ++ +  L +  +E+L  
Sbjct: 403 DHYSCMVDLLGRSGRLEDAYELIKSMPMEPSSGVWGALLGACRVYGNVELGKEVAEQLLS 462

Query: 610 LDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQ 669
           LDP +   +++LSNIYSA   +  A+ VR ++K+R+L + PGC+ IE G   H F  GDQ
Sbjct: 463 LDPSDHRNYIMLSNIYSAAGLWRDASKVRALMKERRLTRNPGCSFIEHGNKIHRFVVGDQ 522

Query: 670 LHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIAT 729
           LHP+S  I+  LE+L  K+REAG   +T   LHD++EE K  M+  HSEKLAIAFGL+ T
Sbjct: 523 LHPRSDEIHTKLEELIRKIREAGCAPKTEFVLHDIDEEVKVDMINKHSEKLAIAFGLLVT 582

Query: 730 EPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
             G  + I KNLR+C DCH+  KF S +  R I++RD+ RFHHF  G+CSC DYW
Sbjct: 583 GSGVPLIITKNLRICGDCHSTAKFASLLEKRTIIIRDSKRFHHFADGLCSCRDYW 637



 Score =  171 bits (433), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 126/440 (28%), Positives = 214/440 (48%), Gaps = 12/440 (2%)

Query: 104 LTPDNFTYSFVLS---AASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVK 160
           L+P    YS V S   A S+C   S    +H   I S   SD F+G  LV +YFK  + +
Sbjct: 55  LSPPFQVYSIVQSLVFAISSCTSVSYCSAIHARVIKSLNYSDGFIGDRLVSMYFKLGYDE 114

Query: 161 SARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAV 220
            A+++FD+MP KD V WNS++SGL         +  F  M    G   +  ++ +V+ A 
Sbjct: 115 DAQRLFDEMPNKDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSAC 174

Query: 221 AEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCN 280
           A++  L  G  +  + +KLG      V+  L++ Y K G ++ A  LF ++    L+S N
Sbjct: 175 ADMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSWN 234

Query: 281 AMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKS 340
           +M+  +  NG  E  + LF  +  +    + +T+V L+      G       IH++  + 
Sbjct: 235 SMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTGLGRQAESIHAYIHRC 294

Query: 341 GIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLF 400
           G  ++  + TAL  +Y++L  + A+  +F+E  ++   +W AM+AGY  +    EAI LF
Sbjct: 295 GFNADIIIATALLNLYAKLGRLNASEDIFEEIKDRDRIAWTAMLAGYAVHACGREAIKLF 354

Query: 401 QEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKS-RNFESNIYVSTALIDMYAK 459
             M    V  + VT + +LSAC+  G +  GK   E++      E  +   + ++D+  +
Sbjct: 355 DLMVKEGVEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVYRVEPRLDHYSCMVDLLGR 414

Query: 460 CGNIVEARELFDLMS-HKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPS---GVT 515
            G + +A EL   M    S   W  ++    ++G+ +E  +  +E L S + PS      
Sbjct: 415 SGRLEDAYELIKSMPMEPSSGVWGALLGACRVYGN-VELGKEVAEQLLS-LDPSDHRNYI 472

Query: 516 FLSVLYACSHAGLVREGDEI 535
            LS +Y  S AGL R+  ++
Sbjct: 473 MLSNIY--SAAGLWRDASKV 490



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 105/421 (24%), Positives = 186/421 (44%), Gaps = 48/421 (11%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           A+ LF  +P  DL  +N ++ G S      + +  +  +R  +   P+  T   +LS  S
Sbjct: 116 AQRLFDEMPNKDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVT---LLSVVS 172

Query: 120 ACCDRSI---GVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVL 176
           AC D      G  LHG  +  G      V  +L+++Y K  ++ +A ++F++MP +  V 
Sbjct: 173 ACADMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVS 232

Query: 177 WNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLG 236
           WNSM+     N   +  + +F ++++  G   D  ++ A+L A  +    R    I    
Sbjct: 233 WNSMVVIHNHNGYAEKGMDLF-NLMKRAGINPDQATMVALLRACTDTGLGRQAESIHAYI 291

Query: 237 LKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSL 296
            + GF+  + + T L++ Y+K G +  +E +F +I   D I+  AM++GY  +     ++
Sbjct: 292 HRCGFNADIIIATALLNLYAKLGRLNASEDIFEEIKDRDRIAWTAMLAGYAVHACGREAI 351

Query: 297 RLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVY 356
           +LF  ++     V+  T          F HL L+ C HS  ++ G          +S VY
Sbjct: 352 KLFDLMVKEGVEVDHVT----------FTHL-LSACSHSGLVEEG----KKYFEIMSEVY 396

Query: 357 SRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVS 416
                            E  L  ++ M+    ++G  E+A  L + M    + P+     
Sbjct: 397 ---------------RVEPRLDHYSCMVDLLGRSGRLEDAYELIKSM---PMEPSSGVWG 438

Query: 417 SILSACAQLGAISLGKWVHELVKS------RNF--ESNIYVSTALIDMYAKCGNIVEARE 468
           ++L AC   G + LGK V E + S      RN+   SNIY +  L    +K   +++ R 
Sbjct: 439 ALLGACRVYGNVELGKEVAEQLLSLDPSDHRNYIMLSNIYSAAGLWRDASKVRALMKERR 498

Query: 469 L 469
           L
Sbjct: 499 L 499


>gi|359492337|ref|XP_002284789.2| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
           mitochondrial-like [Vitis vinifera]
          Length = 694

 Score =  432 bits (1112), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 213/535 (39%), Positives = 325/535 (60%), Gaps = 1/535 (0%)

Query: 251 LVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLF-RQLLASAERV 309
           LVS Y K G  E A+ LF ++   DL+S N+++SG +  G   + L  F R    S  + 
Sbjct: 160 LVSMYFKLGYDEDAQRLFDEMPNKDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQP 219

Query: 310 NSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLF 369
           N  T++ ++      G L     +H   +K G+   + V+ +L  +Y +L  ++AA +LF
Sbjct: 220 NEVTLLSVVSACADMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLF 279

Query: 370 DESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAIS 429
           +E   +SL SWN+M+  +  NG  E+ + LF  M+ + + P+  T+ ++L AC   G   
Sbjct: 280 EEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTGLGR 339

Query: 430 LGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYG 489
             + +H  +    F ++I ++TAL+++YAK G +  + ++F+ +  +  + W  M++GY 
Sbjct: 340 QAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIFEEIKDRDRIAWTAMLAGYA 399

Query: 490 LHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLA 549
           +H  G EA++LF  M+  G+    VTF  +L ACSH+GLV EG + F+ M   +  +P  
Sbjct: 400 VHACGREAIKLFDLMVKEGVEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVYRVEPRL 459

Query: 550 EHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFE 609
           +HY+CMVD+LGR+G+LE A E IK + +EP   VWGALLGAC ++ +  L +  +E+L  
Sbjct: 460 DHYSCMVDLLGRSGRLEDAYELIKSMPMEPSSGVWGALLGACRVYGNVELGKEVAEQLLS 519

Query: 610 LDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQ 669
           LDP +   +++LSNIYSA   +  A+ VR ++K+R+L + PGC+ IE G   H F  GDQ
Sbjct: 520 LDPSDHRNYIMLSNIYSAAGLWRDASKVRALMKERRLTRNPGCSFIEHGNKIHRFVVGDQ 579

Query: 670 LHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIAT 729
           LHP+S  I+  LE+L  K+REAG   +T   LHD++EE K  M+  HSEKLAIAFGL+ T
Sbjct: 580 LHPRSDEIHTKLEELIRKIREAGCAPKTEFVLHDIDEEVKVDMINKHSEKLAIAFGLLVT 639

Query: 730 EPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
             G  + I KNLR+C DCH+  KF S +  R I++RD+ RFHHF  G+CSC DYW
Sbjct: 640 GSGVPLIITKNLRICGDCHSTAKFASLLEKRTIIIRDSKRFHHFADGLCSCRDYW 694



 Score =  169 bits (427), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 124/434 (28%), Positives = 211/434 (48%), Gaps = 12/434 (2%)

Query: 110 TYSFVLS---AASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVF 166
            YS V S   A S+C   S    +H   I S   SD F+G  LV +YFK  + + A+++F
Sbjct: 118 VYSIVQSLVFAISSCTSVSYCSAIHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLF 177

Query: 167 DKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQEL 226
           D+MP KD V WNS++SGL         +  F  M    G   +  ++ +V+ A A++  L
Sbjct: 178 DEMPNKDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSACADMGAL 237

Query: 227 RLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGY 286
             G  +  + +KLG      V+  L++ Y K G ++ A  LF ++    L+S N+M+  +
Sbjct: 238 DEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIH 297

Query: 287 TCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNS 346
             NG  E  + LF  +  +    + +T+V L+      G       IH++  + G  ++ 
Sbjct: 298 NHNGYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTGLGRQAESIHAYIHRCGFNADI 357

Query: 347 SVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQAS 406
            + TAL  +Y++L  + A+  +F+E  ++   +W AM+AGY  +    EAI LF  M   
Sbjct: 358 IIATALLNLYAKLGRLNASEDIFEEIKDRDRIAWTAMLAGYAVHACGREAIKLFDLMVKE 417

Query: 407 KVAPNPVTVSSILSACAQLGAISLGKWVHELVKS-RNFESNIYVSTALIDMYAKCGNIVE 465
            V  + VT + +LSAC+  G +  GK   E++      E  +   + ++D+  + G + +
Sbjct: 418 GVEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVYRVEPRLDHYSCMVDLLGRSGRLED 477

Query: 466 ARELFDLMS-HKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPS---GVTFLSVLY 521
           A EL   M    S   W  ++    ++G+ +E  +  +E L S + PS       LS +Y
Sbjct: 478 AYELIKSMPMEPSSGVWGALLGACRVYGN-VELGKEVAEQLLS-LDPSDHRNYIMLSNIY 535

Query: 522 ACSHAGLVREGDEI 535
             S AGL R+  ++
Sbjct: 536 --SAAGLWRDASKV 547



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 105/421 (24%), Positives = 186/421 (44%), Gaps = 48/421 (11%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           A+ LF  +P  DL  +N ++ G S      + +  +  +R  +   P+  T   +LS  S
Sbjct: 173 AQRLFDEMPNKDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVT---LLSVVS 229

Query: 120 ACCDRSI---GVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVL 176
           AC D      G  LHG  +  G      V  +L+++Y K  ++ +A ++F++MP +  V 
Sbjct: 230 ACADMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVS 289

Query: 177 WNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLG 236
           WNSM+     N   +  + +F ++++  G   D  ++ A+L A  +    R    I    
Sbjct: 290 WNSMVVIHNHNGYAEKGMDLF-NLMKRAGINPDQATMVALLRACTDTGLGRQAESIHAYI 348

Query: 237 LKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSL 296
            + GF+  + + T L++ Y+K G +  +E +F +I   D I+  AM++GY  +     ++
Sbjct: 349 HRCGFNADIIIATALLNLYAKLGRLNASEDIFEEIKDRDRIAWTAMLAGYAVHACGREAI 408

Query: 297 RLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVY 356
           +LF  ++     V+  T          F HL L+ C HS  ++ G          +S VY
Sbjct: 409 KLFDLMVKEGVEVDHVT----------FTHL-LSACSHSGLVEEG----KKYFEIMSEVY 453

Query: 357 SRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVS 416
                            E  L  ++ M+    ++G  E+A  L + M    + P+     
Sbjct: 454 ---------------RVEPRLDHYSCMVDLLGRSGRLEDAYELIKSM---PMEPSSGVWG 495

Query: 417 SILSACAQLGAISLGKWVHELVKS------RNF--ESNIYVSTALIDMYAKCGNIVEARE 468
           ++L AC   G + LGK V E + S      RN+   SNIY +  L    +K   +++ R 
Sbjct: 496 ALLGACRVYGNVELGKEVAEQLLSLDPSDHRNYIMLSNIYSAAGLWRDASKVRALMKERR 555

Query: 469 L 469
           L
Sbjct: 556 L 556


>gi|357481223|ref|XP_003610897.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355512232|gb|AES93855.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 774

 Score =  432 bits (1111), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 264/777 (33%), Positives = 420/777 (54%), Gaps = 60/777 (7%)

Query: 46  KLAHRLSDFKATCYARALFF-SIPKPDLFLFNVIIRGFS---NNEMPKSSICFYTHLRKN 101
           KL H +  F   C  + L++ SI +P+    NV  +  +      + K+    YT    N
Sbjct: 20  KLMHHV--FPKFCILQNLYYASIAQPETIARNVNTQIHTLSLQGNLEKALSLVYT----N 73

Query: 102 TALTPDNFTYSFVLSAASACCDRSI---GVLLHGHAIVSGY---GSDLFVGAALVDLYFK 155
            +LT  ++ + F      AC  +     G+ LH H I++ +    +D+F+   L+++Y K
Sbjct: 74  PSLTLQDYAFLF-----HACAQKKYIKQGMALH-HYILNKHPKIQNDIFLTNNLLNMYCK 127

Query: 156 FSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAA 215
              +  AR +FD+MP ++ V W  ++SG  +    ++   +F  M+       +  + A+
Sbjct: 128 CGHLDYARYLFDQMPRRNFVSWTVLVSGYAQFGLIRECFALFSGML--ACFRPNEFAFAS 185

Query: 216 VLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCG---------EVERAEL 266
           VL A  E Q+++ G+++    LK+     VYV   L++ YSKC            + A +
Sbjct: 186 VLCACEE-QDVKYGLQVHAAALKMSLDFSVYVANALITMYSKCSGGFGGSCDQTTDDAWM 244

Query: 267 LFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGH 326
           +F+ +   +LIS N+MISG+   G  + ++ LF  +  +  R NS+T++G++       H
Sbjct: 245 VFKSMEYRNLISWNSMISGFQFRGLGDKAIGLFAHMYCNGIRFNSTTLLGVLS---SLNH 301

Query: 327 L-----------HLTNCIHSFCL--KSGIVSNSSVLTALSTVYSRLN-EMEAARKLF-DE 371
                       HL NC    CL  KSG++S   V+TAL   Y+ L   +    KLF D 
Sbjct: 302 CMSTSDDINNTHHLKNCFQLHCLTVKSGLISEVEVVTALVKSYADLGGHISDCFKLFLDT 361

Query: 372 SSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLG 431
           S E  + SW A+I+ + +    E+A  LF ++       +  T S  L ACA        
Sbjct: 362 SGEHDIVSWTAIISVFAERD-PEQAFLLFCQLHRENFVLDRHTFSIALKACAYFVTEKNA 420

Query: 432 KWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLH 491
             VH  V  + F ++  VS ALI  Y + G++  + ++F  M     V+WN+M+  Y +H
Sbjct: 421 TEVHSQVMKQGFHNDTVVSNALIHAYGRSGSLALSEQVFTEMGCHDLVSWNSMLKSYAIH 480

Query: 492 GHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEH 551
           G   +AL LF +M    + P   TF+++L ACSHAGLV EG +IF SM   HG  P  +H
Sbjct: 481 GRAKDALDLFKQM---DVHPDSATFVALLAACSHAGLVEEGTQIFNSMTESHGIAPHLDH 537

Query: 552 YACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELD 611
           Y+CMVD+ GRAG++ +A E I+ + ++P   +W +LLG+C  H + +LA++A++K   LD
Sbjct: 538 YSCMVDLYGRAGKIFEAEELIRKMPMKPDSVIWSSLLGSCRKHGEADLAKLAADKFKVLD 597

Query: 612 PENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLH 671
           P+N   ++ +SNIYS+   +++A  +R+ ++  K+ K PG + +EVG   H FTSG Q H
Sbjct: 598 PKNSLAYIQMSNIYSSGGSFIEAGLIRKEMRDSKVRKRPGLSWVEVGKQVHEFTSGGQHH 657

Query: 672 PQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGL----I 727
           P+  AI + LE L G+++E G+  E  +ALHD+E E  E  +  HSEK+A+ F +    I
Sbjct: 658 PKRQAILSRLETLIGQLKEMGYAPEIGSALHDIEVEHIEDQLFHHSEKMALVFAIMNEGI 717

Query: 728 ATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           +   G  I+I+KN+R+C+DCH   K  SK+  + IVVRD+NRFHHFK   CSC DYW
Sbjct: 718 SPCAGNVIKIMKNIRICVDCHNFMKLASKLFQKEIVVRDSNRFHHFKYATCSCNDYW 774



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 131/530 (24%), Positives = 228/530 (43%), Gaps = 52/530 (9%)

Query: 38  QNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTH 97
           QND+     L +         YAR LF  +P+ +   + V++ G++   + +     ++ 
Sbjct: 112 QNDIFLTNNLLNMYCKCGHLDYARYLFDQMPRRNFVSWTVLVSGYAQFGLIRECFALFSG 171

Query: 98  LRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFS 157
           +       P+ F ++ VL A     D   G+ +H  A+       ++V  AL+ +Y K S
Sbjct: 172 ML--ACFRPNEFAFASVLCACEE-QDVKYGLQVHAAALKMSLDFSVYVANALITMYSKCS 228

Query: 158 ---------WVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWL 208
                        A  VF  M  ++ + WNSMISG         +I +F  M  N G   
Sbjct: 229 GGFGGSCDQTTDDAWMVFKSMEYRNLISWNSMISGFQFRGLGDKAIGLFAHMYCN-GIRF 287

Query: 209 DSTSVAAVLPA----------VAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKC 258
           +ST++  VL +          +     L+   ++ CL +K G    V V+T LV  Y+  
Sbjct: 288 NSTTLLGVLSSLNHCMSTSDDINNTHHLKNCFQLHCLTVKSGLISEVEVVTALVKSYADL 347

Query: 259 -GEVERAELLFRDIV-RPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTI-V 315
            G +     LF D     D++S  A+IS +      E +  LF QL      ++  T  +
Sbjct: 348 GGHISDCFKLFLDTSGEHDIVSWTAIISVFA-ERDPEQAFLLFCQLHRENFVLDRHTFSI 406

Query: 316 GLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEK 375
            L    Y     + T  +HS  +K G  +++ V  AL   Y R   +  + ++F E    
Sbjct: 407 ALKACAYFVTEKNATE-VHSQVMKQGFHNDTVVSNALIHAYGRSGSLALSEQVFTEMGCH 465

Query: 376 SLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWV- 434
            L SWN+M+  Y  +G  ++A+ LF++M    V P+  T  ++L+AC+  G +  G  + 
Sbjct: 466 DLVSWNSMLKSYAIHGRAKDALDLFKQMD---VHPDSATFVALLAACSHAGLVEEGTQIF 522

Query: 435 HELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSE-VTWNTMISGYGLHGH 493
           + + +S     ++   + ++D+Y + G I EA EL   M  K + V W++++     HG 
Sbjct: 523 NSMTESHGIAPHLDHYSCMVDLYGRAGKIFEAEELIRKMPMKPDSVIWSSLLGSCRKHGE 582

Query: 494 G------------LEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVRE 531
                        L+     + +  S I  SG +F+        AGL+R+
Sbjct: 583 ADLAKLAADKFKVLDPKNSLAYIQMSNIYSSGGSFIE-------AGLIRK 625



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 42/174 (24%), Positives = 80/174 (45%), Gaps = 16/174 (9%)

Query: 21  TQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIR 80
           T+   T+ H+Q++  GF ND      L H      +   +  +F  +   DL  +N +++
Sbjct: 416 TEKNATEVHSQVMKQGFHNDTVVSNALIHAYGRSGSLALSEQVFTEMGCHDLVSWNSMLK 475

Query: 81  GFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVS--- 137
            ++ +   K ++     L K   + PD+ T+  +L+A S       G++  G  I +   
Sbjct: 476 SYAIHGRAKDAL----DLFKQMDVHPDSATFVALLAACS-----HAGLVEEGTQIFNSMT 526

Query: 138 ---GYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEK-DTVLWNSMISGLMKN 187
              G    L   + +VDLY +   +  A ++  KMP K D+V+W+S++    K+
Sbjct: 527 ESHGIAPHLDHYSCMVDLYGRAGKIFEAEELIRKMPMKPDSVIWSSLLGSCRKH 580


>gi|15221306|ref|NP_177601.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169836|sp|Q9CA54.1|PP122_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g74630
 gi|12324801|gb|AAG52363.1|AC011765_15 hypothetical protein; 86841-88772 [Arabidopsis thaliana]
 gi|332197495|gb|AEE35616.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 643

 Score =  432 bits (1111), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 243/674 (36%), Positives = 375/674 (55%), Gaps = 43/674 (6%)

Query: 115 LSAASACCDRSIGVLLHGHAIVSGYGSD-LFVGAALVDLYFKFS-WVKSARKVFDKMPEK 172
           LS  ++C +      +HG  I  G  +D  F G  ++      S  +  AR++    PE 
Sbjct: 9   LSLLNSCKNLRALTQIHGLFIKYGVDTDSYFTGKLILHCAISISDALPYARRLLLCFPEP 68

Query: 173 DTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEI 232
           D  ++N+++ G  ++    +S+ VF +M+R G  + DS S A V+ AV   + LR G ++
Sbjct: 69  DAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQM 128

Query: 233 QCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKT 292
            C  LK G   H++V T L+  Y  CG VE A  +F ++ +P+L++ NA+I+        
Sbjct: 129 HCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRGNDV 188

Query: 293 ESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTAL 352
             +  +F ++L                                       V N +    +
Sbjct: 189 AGAREIFDKML---------------------------------------VRNHTSWNVM 209

Query: 353 STVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNP 412
              Y +  E+E+A+++F E   +   SW+ MI G   NG   E+   F+E+Q + ++PN 
Sbjct: 210 LAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNE 269

Query: 413 VTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDL 472
           V+++ +LSAC+Q G+   GK +H  V+   +   + V+ ALIDMY++CGN+  AR +F+ 
Sbjct: 270 VSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEG 329

Query: 473 MSHKS-EVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVRE 531
           M  K   V+W +MI+G  +HG G EA++LF+EM   G+ P G++F+S+L+ACSHAGL+ E
Sbjct: 330 MQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEE 389

Query: 532 GDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGAC 591
           G++ F  M   +  +P  EHY CMVD+ GR+G+L+KA +FI  + + P   VW  LLGAC
Sbjct: 390 GEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQMPIPPTAIVWRTLLGAC 449

Query: 592 MIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPG 651
             H +  LA    ++L ELDP N G  VLLSN Y+    +   A++R+ +  +++ K   
Sbjct: 450 SSHGNIELAEQVKQRLNELDPNNSGDLVLLSNAYATAGKWKDVASIRKSMIVQRIKKTTA 509

Query: 652 CTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMR-EAGFQTETVTALHDVEEEEKE 710
            +L+EVG T + FT+G++        +  L+++  +++ EAG+  E  +AL+DVEEEEKE
Sbjct: 510 WSLVEVGKTMYKFTAGEKKKGIDIEAHEKLKEIILRLKDEAGYTPEVASALYDVEEEEKE 569

Query: 711 LMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRF 770
             +  HSEKLA+AF L     G  IRI+KNLR+C DCH   K  SKV G  I+VRD NRF
Sbjct: 570 DQVSKHSEKLALAFALARLSKGANIRIVKNLRICRDCHAVMKLTSKVYGVEILVRDRNRF 629

Query: 771 HHFKGGVCSCGDYW 784
           H FK G CSC DYW
Sbjct: 630 HSFKDGSCSCRDYW 643



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 155/537 (28%), Positives = 244/537 (45%), Gaps = 54/537 (10%)

Query: 13  LSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKL----AHRLSDFKATCYARALFFSIP 68
           LSLL   K    LTQ H   I +G   D     KL    A  +SD  A  YAR L    P
Sbjct: 9   LSLLNSCKNLRALTQIHGLFIKYGVDTDSYFTGKLILHCAISISD--ALPYARRLLLCFP 66

Query: 69  KPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGV 128
           +PD F+FN ++RG+S ++ P +S+  +  + +   + PD+F+++FV+ A         G 
Sbjct: 67  EPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGF 126

Query: 129 LLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNC 188
            +H  A+  G  S LFVG  L+ +Y     V+ ARKVFD+M + + V WN++I+   +  
Sbjct: 127 QMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRGN 186

Query: 189 CFQDSIWVFGDM-VRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYV 247
               +  +F  M VRN  +W                                        
Sbjct: 187 DVAGAREIFDKMLVRNHTSW---------------------------------------- 206

Query: 248 LTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAE 307
              +++ Y K GE+E A+ +F ++   D +S + MI G   NG    S   FR+L  +  
Sbjct: 207 -NVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGM 265

Query: 308 RVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARK 367
             N  ++ G++      G       +H F  K+G     SV  AL  +YSR   +  AR 
Sbjct: 266 SPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARL 325

Query: 368 LFDESSEKS-LASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLG 426
           +F+   EK  + SW +MIAG   +G  EEA+ LF EM A  V P+ ++  S+L AC+  G
Sbjct: 326 VFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAG 385

Query: 427 AISLGK-WVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMS-HKSEVTWNTM 484
            I  G+ +  E+ +  + E  I     ++D+Y + G + +A +    M    + + W T+
Sbjct: 386 LIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQMPIPPTAIVWRTL 445

Query: 485 ISGYGLHGHGLEALQLFSEMLHSGIRPSG-VTFLSVLYACSHAGLVREGDEIFQSMI 540
           +     HG+   A Q+   +       SG +  LS  YA   AG  ++   I +SMI
Sbjct: 446 LGACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSNAYAT--AGKWKDVASIRKSMI 500


>gi|225427576|ref|XP_002268530.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g48910-like [Vitis vinifera]
          Length = 631

 Score =  432 bits (1111), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 239/661 (36%), Positives = 361/661 (54%), Gaps = 65/661 (9%)

Query: 130 LHGHAIVSGYGSDLFVGAALVDLYFKFSWVKS------ARKVFDKMPEKDTVLWNSMISG 183
           LH   I +    D    A L+    +FS V        ARK+F  M   +   +N++I  
Sbjct: 30  LHAQMIKTAQIRDPLAAAELL----RFSAVSDHRDLDYARKIFRSMHRPNCFSYNTLIRA 85

Query: 184 LMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHD 243
           L ++    D++ VF +MV +     +  +  +V  A    + LR G ++  L +K G   
Sbjct: 86  LSESNDPCDALLVFIEMVEDCSVEPNCFTFPSVFKACGRAERLREGRQVHGLAVKFGLDS 145

Query: 244 HVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLL 303
             +V++ +V  Y  C                               G  E + RLF    
Sbjct: 146 DEFVVSNVVRMYLSC-------------------------------GVMEDAHRLF---- 170

Query: 304 ASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEME 363
                               +  + +  C      K  +  +  +   +   Y R+ E+E
Sbjct: 171 --------------------YRRVFVDGCDGIRDKKRRVDGDVVLWNVMIDGYVRIGELE 210

Query: 364 AARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACA 423
            AR LFDE  ++S+ SWN MIAGY Q+G  +EA+ +F+EMQ ++V PN VT+ S+L A +
Sbjct: 211 VARNLFDEMPQRSVVSWNVMIAGYAQSGHFKEAVEVFREMQMAEVPPNYVTLVSVLPAMS 270

Query: 424 QLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNT 483
           +LGA+ LGKWVH      N   +  + +ALIDMYAKCG+I +A ++F+ +  ++ VTW+T
Sbjct: 271 RLGALELGKWVHLYAVRNNIGVDDVLGSALIDMYAKCGSIEKALQVFEGLPKRNVVTWST 330

Query: 484 MISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDH 543
           +I+G  +HG   + L  F +M  +G+ PS VT++ +L ACSHAGLV EG   F  M+   
Sbjct: 331 IIAGLAMHGRAKDTLDHFEDMERAGVMPSDVTYIGLLSACSHAGLVNEGRWFFDHMVRVS 390

Query: 544 GFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVA 603
           G +P  EHY CMVD+LGRAG LE++ E I  + ++P   +W ALLGAC +H +  + +  
Sbjct: 391 GLEPRIEHYGCMVDLLGRAGLLEESEELILNMPIKPDDVIWKALLGACKMHGNVEMGKRV 450

Query: 604 SEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHV 663
           +E L EL P + G +V LSNIY++  ++   A VR ++K+  + K PGC+ IE+ G  H 
Sbjct: 451 AEHLMELAPHDSGSYVALSNIYASLGNWEGVAKVRLMMKEMDVRKDPGCSWIELDGVIHE 510

Query: 664 FTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIA 723
           F   D  HP+S  I++ML++++  +   G++  T   L +++EE+KE  +  HSEK+AIA
Sbjct: 511 FLVEDDSHPKSKKIHSMLQEMSRNLILVGYRPNTTQVLTNMDEEDKESSLNYHSEKIAIA 570

Query: 724 FGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDY 783
           FGLI+T+P T +RI KNLR+C DCH++ K ISK+  R I+VRD  RFHHF  G CSC DY
Sbjct: 571 FGLISTQPQTPLRITKNLRICEDCHSSIKLISKIYKRKIIVRDRKRFHHFVNGSCSCMDY 630

Query: 784 W 784
           W
Sbjct: 631 W 631



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 114/497 (22%), Positives = 210/497 (42%), Gaps = 95/497 (19%)

Query: 20  KTQSQLTQTHAQIIIHGFQNDLSTVTKLAH--RLSDFKATCYARALFFSIPKPDLFLFNV 77
           KT   L Q HAQ+I      D     +L     +SD +   YAR +F S+ +P+ F +N 
Sbjct: 22  KTMQDLKQLHAQMIKTAQIRDPLAAAELLRFSAVSDHRDLDYARKIFRSMHRPNCFSYNT 81

Query: 78  IIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVS 137
           +IR  S +  P  ++  +  + ++ ++ P+ FT+  V  A         G  +HG A+  
Sbjct: 82  LIRALSESNDPCDALLVFIEMVEDCSVEPNCFTFPSVFKACGRAERLREGRQVHGLAVKF 141

Query: 138 GYGSDLFVGA----------------------------------------------ALVD 151
           G  SD FV +                                               ++D
Sbjct: 142 GLDSDEFVVSNVVRMYLSCGVMEDAHRLFYRRVFVDGCDGIRDKKRRVDGDVVLWNVMID 201

Query: 152 LYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDST 211
            Y +   ++ AR +FD+MP++  V WN MI+G  ++  F++++ VF +M +      +  
Sbjct: 202 GYVRIGELEVARNLFDEMPQRSVVSWNVMIAGYAQSGHFKEAVEVFREM-QMAEVPPNYV 260

Query: 212 SVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDI 271
           ++ +VLPA++ +  L LG  +    ++        + + L+  Y+KCG +E+A  +F  +
Sbjct: 261 TLVSVLPAMSRLGALELGKWVHLYAVRNNIGVDDVLGSALIDMYAKCGSIEKALQVFEGL 320

Query: 272 VRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTN 331
            + ++++ + +I+G   +G+ + +L  F  +  +    +  T +GL+             
Sbjct: 321 PKRNVVTWSTIIAGLAMHGRAKDTLDHFEDMERAGVMPSDVTYIGLL------------- 367

Query: 332 CIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDE-----SSEKSLASWNAMIAG 386
              S C  +G+V+                     R  FD        E  +  +  M+  
Sbjct: 368 ---SACSHAGLVNE-------------------GRWFFDHMVRVSGLEPRIEHYGCMVDL 405

Query: 387 YTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHE-LVKSRNFES 445
             + GL EE+  L   M    + P+ V   ++L AC   G + +GK V E L++    +S
Sbjct: 406 LGRAGLLEESEELILNM---PIKPDDVIWKALLGACKMHGNVEMGKRVAEHLMELAPHDS 462

Query: 446 NIYVSTALIDMYAKCGN 462
             YV  AL ++YA  GN
Sbjct: 463 GSYV--ALSNIYASLGN 477



 Score = 99.4 bits (246), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 88/356 (24%), Positives = 155/356 (43%), Gaps = 59/356 (16%)

Query: 321 FYPFGHLHLTNCIHSFCLKSGIVSN---SSVLTALSTVYSRLNEMEAARKLFDESSEKSL 377
           F+P   +     +H+  +K+  + +   ++ L   S V S   +++ ARK+F      + 
Sbjct: 18  FFPCKTMQDLKQLHAQMIKTAQIRDPLAAAELLRFSAV-SDHRDLDYARKIFRSMHRPNC 76

Query: 378 ASWNAMIAGYTQNGLTEEAISLFQEM-QASKVAPNPVTVSSILSACAQLGAISLGKWVHE 436
            S+N +I   +++    +A+ +F EM +   V PN  T  S+  AC +   +  G+ VH 
Sbjct: 77  FSYNTLIRALSESNDPCDALLVFIEMVEDCSVEPNCFTFPSVFKACGRAERLREGRQVHG 136

Query: 437 LVKSRNFESNIYVSTALIDMYAKCGNIVE------------------------------- 465
           L      +S+ +V + ++ MY  CG + +                               
Sbjct: 137 LAVKFGLDSDEFVVSNVVRMYLSCGVMEDAHRLFYRRVFVDGCDGIRDKKRRVDGDVVLW 196

Query: 466 ---------------ARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIR 510
                          AR LFD M  +S V+WN MI+GY   GH  EA+++F EM  + + 
Sbjct: 197 NVMIDGYVRIGELEVARNLFDEMPQRSVVSWNVMIAGYAQSGHFKEAVEVFREMQMAEVP 256

Query: 511 PSGVTFLSVLYACSHAGLVREGDEIFQSMIHDH-GFKPLAEHYACMVDILGRAGQLEKAL 569
           P+ VT +SVL A S  G +  G  +    + ++ G   +    + ++D+  + G +EKAL
Sbjct: 257 PNYVTLVSVLPAMSRLGALELGKWVHLYAVRNNIGVDDVLG--SALIDMYAKCGSIEKAL 314

Query: 570 EFIKGLAVEPGPAVWGALLGACMIH---KDTNLARVASEKLFELDPENVGYHVLLS 622
           +  +GL  +     W  ++    +H   KDT L      +   + P +V Y  LLS
Sbjct: 315 QVFEGLP-KRNVVTWSTIIAGLAMHGRAKDT-LDHFEDMERAGVMPSDVTYIGLLS 368


>gi|86438643|emb|CAJ26357.1| Selenium binding protein [Brachypodium sylvaticum]
          Length = 624

 Score =  432 bits (1111), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 223/571 (39%), Positives = 341/571 (59%), Gaps = 3/571 (0%)

Query: 215 AVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRP 274
           A + A A+ + L    +I        F    ++   L+  Y KCG V  A  +F  + + 
Sbjct: 56  AFITACAQSKNLDDARKIHGHLASSRFEGDAFLDNSLIHLYCKCGSVVEAHKVFDKMRKK 115

Query: 275 DLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIH 334
           D++S  ++I+GY  N     ++ L   +L    + N  T   L+     +    +   IH
Sbjct: 116 DMVSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASLLKAAGAYADSGIGGQIH 175

Query: 335 SFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTE 394
           +  +K     +  V +AL  +Y+R  +M+ A  +FD+   K+  SWNA+I+G+ + G  E
Sbjct: 176 ALAVKCDWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGFARKGDGE 235

Query: 395 EAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVH-ELVKSRNFESNIYVSTAL 453
            A+ +F EMQ +       T SSI S  A +GA+  GKWVH  +VKSR  +   +V   +
Sbjct: 236 TALMVFAEMQRNGFEATHFTYSSIFSGLAGIGALEQGKWVHAHMVKSRQ-KLTAFVGNTM 294

Query: 454 IDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSG 513
           +DMYAK G++++AR++F+ + +K  VTWN+M++ +  +G G EA+  F EM  SGI  + 
Sbjct: 295 LDMYAKSGSMIDARKVFERVLNKDLVTWNSMLTAFAQYGLGKEAVSHFEEMRKSGIYLNQ 354

Query: 514 VTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIK 573
           +TFL +L ACSH GLV+EG   F  MI ++  +P  EHY  +VD+LGRAG L  AL FI 
Sbjct: 355 ITFLCILTACSHGGLVKEGKHYFD-MIKEYNLEPEIEHYVTVVDLLGRAGLLNYALVFIF 413

Query: 574 GLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQ 633
            + +EP  AVWGALL AC +HK+  + + A++ +F+LDP++ G  VLL NIY++   +  
Sbjct: 414 KMPMEPTAAVWGALLAACRMHKNAKVGQFAADHVFQLDPDDSGPPVLLYNIYASTGHWDA 473

Query: 634 AATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGF 693
           AA VR+++K   + K P C+ +E+G + H+F + D  HP++  IY M ++++ K+R+ G+
Sbjct: 474 AARVRKMMKATGVKKEPACSWVEIGNSVHMFVANDDTHPRAEEIYKMWDEISMKIRKEGY 533

Query: 694 QTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKF 753
             +    L  V+E+E+E  ++ HSEK+A+AF LI    G  IRI+KN+R+C DCH+A K+
Sbjct: 534 VPDMDYVLLHVDEQEREANLQYHSEKIALAFALIQMPAGATIRIMKNIRICGDCHSAFKY 593

Query: 754 ISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           ISKV  R IVVRD NRFHHF  G CSCGDYW
Sbjct: 594 ISKVFEREIVVRDTNRFHHFSNGSCSCGDYW 624



 Score =  172 bits (436), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 107/389 (27%), Positives = 193/389 (49%), Gaps = 2/389 (0%)

Query: 104 LTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSAR 163
           L P    Y   ++A +   +      +HGH   S +  D F+  +L+ LY K   V  A 
Sbjct: 47  LAPTPRVYHAFITACAQSKNLDDARKIHGHLASSRFEGDAFLDNSLIHLYCKCGSVVEAH 106

Query: 164 KVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEV 223
           KVFDKM +KD V W S+I+G  +N    ++I +   M++ G    +  + A++L A    
Sbjct: 107 KVFDKMRKKDMVSWTSLIAGYAQNDMPAEAIGLLPGMLK-GRFKPNGFTFASLLKAAGAY 165

Query: 224 QELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMI 283
            +  +G +I  L +K  +H+ VYV + L+  Y++CG+++ A  +F  +   + +S NA+I
Sbjct: 166 ADSGIGGQIHALAVKCDWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALI 225

Query: 284 SGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIV 343
           SG+   G  E++L +F ++  +       T   +       G L     +H+  +KS   
Sbjct: 226 SGFARKGDGETALMVFAEMQRNGFEATHFTYSSIFSGLAGIGALEQGKWVHAHMVKSRQK 285

Query: 344 SNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEM 403
             + V   +  +Y++   M  ARK+F+    K L +WN+M+  + Q GL +EA+S F+EM
Sbjct: 286 LTAFVGNTMLDMYAKSGSMIDARKVFERVLNKDLVTWNSMLTAFAQYGLGKEAVSHFEEM 345

Query: 404 QASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNI 463
           + S +  N +T   IL+AC+  G +  GK   +++K  N E  I     ++D+  + G +
Sbjct: 346 RKSGIYLNQITFLCILTACSHGGLVKEGKHYFDMIKEYNLEPEIEHYVTVVDLLGRAGLL 405

Query: 464 VEARE-LFDLMSHKSEVTWNTMISGYGLH 491
             A   +F +    +   W  +++   +H
Sbjct: 406 NYALVFIFKMPMEPTAAVWGALLAACRMH 434



 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 83/339 (24%), Positives = 158/339 (46%), Gaps = 17/339 (5%)

Query: 5   TPQSRNLFLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALF 64
           TP+  + F++    +K      + H  +    F+ D      L H      +   A  +F
Sbjct: 50  TPRVYHAFITACAQSKNLDDARKIHGHLASSRFEGDAFLDNSLIHLYCKCGSVVEAHKVF 109

Query: 65  FSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDR 124
             + K D+  +  +I G++ N+MP  +I     + K     P+ FT++ +L AA A  D 
Sbjct: 110 DKMRKKDMVSWTSLIAGYAQNDMPAEAIGLLPGMLKGR-FKPNGFTFASLLKAAGAYADS 168

Query: 125 SIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGL 184
            IG  +H  A+   +  D++VG+AL+D+Y +   +  A  VFDK+  K+ V WN++ISG 
Sbjct: 169 GIGGQIHALAVKCDWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGF 228

Query: 185 MKNCCFQDSIWVFGDMVRNGGTWLDST--SVAAVLPAVAEVQELRLGMEIQCLGLKLGFH 242
            +    + ++ VF +M RNG    ++T  + +++   +A +  L  G  +    +K    
Sbjct: 229 ARKGDGETALMVFAEMQRNG---FEATHFTYSSIFSGLAGIGALEQGKWVHAHMVKSRQK 285

Query: 243 DHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQL 302
              +V   ++  Y+K G +  A  +F  ++  DL++ N+M++ +   G  + ++  F ++
Sbjct: 286 LTAFVGNTMLDMYAKSGSMIDARKVFERVLNKDLVTWNSMLTAFAQYGLGKEAVSHFEEM 345

Query: 303 LASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSG 341
             S   +N  T + +           LT C H   +K G
Sbjct: 346 RKSGIYLNQITFLCI-----------LTACSHGGLVKEG 373



 Score = 89.7 bits (221), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 54/193 (27%), Positives = 96/193 (49%), Gaps = 10/193 (5%)

Query: 400 FQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAK 459
              + + ++AP P    + ++ACAQ   +   + +H  + S  FE + ++  +LI +Y K
Sbjct: 39  LDHLDSGELAPTPRVYHAFITACAQSKNLDDARKIHGHLASSRFEGDAFLDNSLIHLYCK 98

Query: 460 CGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSV 519
           CG++VEA ++FD M  K  V+W ++I+GY  +    EA+ L   ML    +P+G TF S+
Sbjct: 99  CGSVVEAHKVFDKMRKKDMVSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASL 158

Query: 520 LYACSHAGLVREGDEIFQSMI----HDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGL 575
           L A         G +I    +    H+  +   A     ++D+  R G+++ A      L
Sbjct: 159 LKAAGAYADSGIGGQIHALAVKCDWHEDVYVGSA-----LLDMYARCGKMDMATAVFDKL 213

Query: 576 AVEPGPAVWGALL 588
             + G + W AL+
Sbjct: 214 DSKNGVS-WNALI 225


>gi|147832325|emb|CAN66581.1| hypothetical protein VITISV_030261 [Vitis vinifera]
          Length = 622

 Score =  432 bits (1111), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 246/614 (40%), Positives = 353/614 (57%), Gaps = 40/614 (6%)

Query: 208 LDSTSVAA----VLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYS--KCGEV 261
           L S S AA    +L   + ++ELR   +I    LK G        + L++F +    G +
Sbjct: 12  LSSESNAAQTLHLLQRCSNMEELR---QIHGQMLKTGLILDEIPASKLLAFCASPNSGSL 68

Query: 262 ERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVF 321
             A  +F  I RP+    N MI GY+ + + E +L L+  +L  +   N+ T   L+   
Sbjct: 69  AYARTVFDRIFRPNTFMWNTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKAC 128

Query: 322 YPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWN 381
                   T  IH+  +K G  S      +L  VYS+  ++++AR LFD+  ++   SWN
Sbjct: 129 SSMSASEETQQIHAHIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDTVSWN 188

Query: 382 AMIAGYTQNGLTE-------------------------------EAISLFQEMQASKVAP 410
           +MI GYT+ G  E                               EA++LF  MQ + +  
Sbjct: 189 SMIDGYTKCGEIEMAYEIFNHMPERNIISWTSMISGCVGAGKPKEALNLFHRMQTAGIKL 248

Query: 411 NPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELF 470
           + V + S L ACA LG +  GKW+H  +K    E +  +   LIDMYAKCG++ EA E+F
Sbjct: 249 DNVALVSTLQACADLGVLDQGKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAIEVF 308

Query: 471 DLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVR 530
             M  K    W  MISGY +HG G EAL+ F +M  +G+ P+ +TF  +L ACSHAGLV 
Sbjct: 309 RKMEEKGVSVWTAMISGYAIHGRGREALEWFMKMQTAGVEPNQMTFTGILTACSHAGLVH 368

Query: 531 EGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGA 590
           E   +F+SM   HGFKP  EHY CMVD+LGRAG L++A E I+ + V+P  A+WGALL A
Sbjct: 369 EAKLLFESMERIHGFKPSIEHYGCMVDLLGRAGLLKEAEELIENMPVKPNAAIWGALLNA 428

Query: 591 CMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAP 650
           C IH +  L +   + L ++DP + G ++ L++I++A  ++ QAA VR+ +K++ ++K P
Sbjct: 429 CHIHGNLELGKQIGKILIQVDPGHGGRYIHLASIHAAAGEWNQAARVRRQMKEQGVSKLP 488

Query: 651 GCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKE 710
           GC++I V GT H F +GD+ HPQ   I  MLE++  ++RE G++ +    L D+E++EKE
Sbjct: 489 GCSVISVNGTAHEFLAGDESHPQIKEIDHMLEQIVERLREEGYKPKLGDLLLDLEDKEKE 548

Query: 711 LMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRF 770
             +  HSEKLA+ FGLI+T+PG  IRI+KNLRVC DCHT  K ISKV  R I++RD  RF
Sbjct: 549 TAIHHHSEKLAVTFGLISTKPGMTIRIVKNLRVCEDCHTVIKLISKVYAREILMRDRTRF 608

Query: 771 HHFKGGVCSCGDYW 784
           H FK G C+CGDYW
Sbjct: 609 HLFKDGNCTCGDYW 622



 Score =  149 bits (376), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 124/461 (26%), Positives = 213/461 (46%), Gaps = 72/461 (15%)

Query: 13  LSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLS--DFKATCYARALFFSIPKP 70
           L LL+      +L Q H Q++  G   D    +KL    +  +  +  YAR +F  I +P
Sbjct: 22  LHLLQRCSNMEELRQIHGQMLKTGLILDEIPASKLLAFCASPNSGSLAYARTVFDRIFRP 81

Query: 71  DLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDN-FTYSFVLSAASACCDRSIGVL 129
           + F++N +IRG+SN++ P+ ++  Y H+  ++   P N +T+ F+L A S+         
Sbjct: 82  NTFMWNTMIRGYSNSKEPEEALLLYHHMLYHS--VPHNAYTFPFLLKACSSMSASEETQQ 139

Query: 130 LHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCC 189
           +H H I  G+GS+++   +L+++Y K   +KSAR +FD++ ++DTV WNSMI G  K   
Sbjct: 140 IHAHIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDTVSWNSMIDGYTKCGE 199

Query: 190 FQDSIWVFGDMV-RNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLK---------- 238
            + +  +F  M  RN  +W  ++ ++  + A    + L L   +Q  G+K          
Sbjct: 200 IEMAYEIFNHMPERNIISW--TSMISGCVGAGKPKEALNLFHRMQTAGIKLDNVALVSTL 257

Query: 239 -----LGFHD-----HVYV---------LTG--LVSFYSKCGEVERAELLFRDIVRPDLI 277
                LG  D     H Y+         + G  L+  Y+KCG++E A  +FR +    + 
Sbjct: 258 QACADLGVLDQGKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAIEVFRKMEEKGVS 317

Query: 278 SCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFC 337
              AMISGY  +G+   +L  F ++  +    N  T  G+           LT C H   
Sbjct: 318 VWTAMISGYAIHGRGREALEWFMKMQTAGVEPNQMTFTGI-----------LTACSH--- 363

Query: 338 LKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAI 397
             +G+V  + +L            ME          + S+  +  M+    + GL +EA 
Sbjct: 364 --AGLVHEAKLL---------FESMERIHGF-----KPSIEHYGCMVDLLGRAGLLKEAE 407

Query: 398 SLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELV 438
            L + M    V PN     ++L+AC   G + LGK + +++
Sbjct: 408 ELIENM---PVKPNAAIWGALLNACHIHGNLELGKQIGKIL 445


>gi|147818712|emb|CAN65041.1| hypothetical protein VITISV_009461 [Vitis vinifera]
          Length = 1072

 Score =  432 bits (1111), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 248/727 (34%), Positives = 380/727 (52%), Gaps = 63/727 (8%)

Query: 115  LSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDT 174
            L++   C   +    LH H  ++G          L++ Y +    +S+++VFD  P+ D+
Sbjct: 352  LTSHKRCATSTTLTQLHAHLFITGLHRHPPASTKLIESYAQIGIFESSKRVFDTFPKPDS 411

Query: 175  VLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWL-------------------------- 208
             +W  +I   +    F++++ ++ +MV    T +                          
Sbjct: 412  FMWGVLIKCYVWGGFFEEAVSLYHEMVYQDQTQISNFVFPSVLKACSGFGDLSVGGKNGQ 471

Query: 209  ------------------DSTSVAAVLPAVAEVQELRLGMEIQCLG-LKLGFHDHVYVL- 248
                              DS ++ +V  A +E+  LRLG     LG +K G   H +V+ 
Sbjct: 472  ASEGLDMFSQMISEAVEPDSVTMLSVTEACSELGSLRLGR----LGRVKEGRSVHGFVIR 527

Query: 249  -----------TGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLR 297
                         L+  Y+  G +     +F  I    ++S N +IS +T NG+ E +L 
Sbjct: 528  RAMDPELDFLGPALMELYADTGNLRDCHKVFETIKEKTILSWNTLISIFTRNGQPEEALL 587

Query: 298  LFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYS 357
            LF Q+       +S ++   +          L   IH + +K+G   N  V  AL  +Y+
Sbjct: 588  LFVQMQTQGLMPDSYSLASSLSACGTISFSQLGAQIHGYIIKTGNF-NDFVQNALIDMYA 646

Query: 358  RLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSS 417
            +   + +A K+F++  EKSL +WN+MI G++QNG + EAI+LF +M  + V  + +T  S
Sbjct: 647  KCGFVHSANKMFEKIKEKSLVTWNSMICGFSQNGYSVEAITLFDQMYMNCVKMDKLTFLS 706

Query: 418  ILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKS 477
            ++ AC+ LG +  GKWVH  +       + Y+ TAL DMY+KCG +  A  +FD MS +S
Sbjct: 707  VIQACSHLGYLEKGKWVHHKLIMYGLRKDSYLDTALTDMYSKCGELQMAHGVFDRMSERS 766

Query: 478  EVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQ 537
             V+W+ MI+GYG+HG     + LF++ML SGI+P+ +TF+ +L ACSHAG V EG   F 
Sbjct: 767  IVSWSVMIAGYGMHGQINATISLFNQMLGSGIKPNDITFMHILSACSHAGAVEEGKLYFN 826

Query: 538  SMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDT 597
            SM  + G +P  +H+ACMVD+L RAG L  A + I  L      ++WGALL  C IHK  
Sbjct: 827  SM-SEFGVEPKHDHFACMVDLLSRAGDLNGAYQIITSLPFPANSSIWGALLNGCRIHKRI 885

Query: 598  NLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEV 657
            ++ +   + L ++D  + GY+ LLSNIY+ E  + +   VR ++K + L K PG + IE+
Sbjct: 886  DIIKSIEKNLLDVDTADTGYYTLLSNIYAEEGTWDKFGKVRSMMKSKGLRKVPGYSTIEI 945

Query: 658  GGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHS 717
                + F  GD  H Q+  IY  LE     +    + +E   ++    +  KE  +  HS
Sbjct: 946  DKKIYRFGPGDTSHSQTKDIYRFLENFRSLVHAQVYDSEPDNSIVGTSKFNKENNVVSHS 1005

Query: 718  EKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGV 777
            EKLAIAFG+I T PGT +RI KNLRVC DCH+  K  SK+TGR I++RD NRFH F+ G 
Sbjct: 1006 EKLAIAFGIINTRPGTTLRISKNLRVCRDCHSFAKIASKITGREIIMRDLNRFHCFRNGS 1065

Query: 778  CSCGDYW 784
            CSC DYW
Sbjct: 1066 CSCNDYW 1072



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 82/279 (29%), Positives = 143/279 (51%), Gaps = 14/279 (5%)

Query: 63  LFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACC 122
           +F +I +  +  +N +I  F+ N  P+ ++  +  + +   L PD+++ +  LSA     
Sbjct: 557 VFETIKEKTILSWNTLISIFTRNGQPEEALLLFVQM-QTQGLMPDSYSLASSLSACGTIS 615

Query: 123 DRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMIS 182
              +G  +HG+ I +G  +D FV  AL+D+Y K  +V SA K+F+K+ EK  V WNSMI 
Sbjct: 616 FSQLGAQIHGYIIKTGNFND-FVQNALIDMYAKCGFVHSANKMFEKIKEKSLVTWNSMIC 674

Query: 183 GLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFH 242
           G  +N    ++I +F  M  N    +D  +  +V+ A + +  L  G  +    +  G  
Sbjct: 675 GFSQNGYSVEAITLFDQMYMN-CVKMDKLTFLSVIQACSHLGYLEKGKWVHHKLIMYGLR 733

Query: 243 DHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQL 302
              Y+ T L   YSKCGE++ A  +F  +    ++S + MI+GY  +G+  +++ LF Q+
Sbjct: 734 KDSYLDTALTDMYSKCGELQMAHGVFDRMSERSIVSWSVMIAGYGMHGQINATISLFNQM 793

Query: 303 LASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSG 341
           L S          G+ P    F H+ L+ C H+  ++ G
Sbjct: 794 LGS----------GIKPNDITFMHI-LSACSHAGAVEEG 821



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 76/281 (27%), Positives = 119/281 (42%), Gaps = 22/281 (7%)

Query: 18  GAKTQSQL-TQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATC----YARALFFSIPKPDL 72
           G  + SQL  Q H  II  G  ND      + + L D  A C     A  +F  I +  L
Sbjct: 612 GTISFSQLGAQIHGYIIKTGNFNDF-----VQNALIDMYAKCGFVHSANKMFEKIKEKSL 666

Query: 73  FLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHG 132
             +N +I GFS N     +I  +  +  N  +  D  T+  V+ A S       G  +H 
Sbjct: 667 VTWNSMICGFSQNGYSVEAITLFDQMYMN-CVKMDKLTFLSVIQACSHLGYLEKGKWVHH 725

Query: 133 HAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQD 192
             I+ G   D ++  AL D+Y K   ++ A  VFD+M E+  V W+ MI+G   +     
Sbjct: 726 KLIMYGLRKDSYLDTALTDMYSKCGELQMAHGVFDRMSERSIVSWSVMIAGYGMHGQINA 785

Query: 193 SIWVFGDMVRNGGTWLDST--SVAAVLPAVAEVQELRLGME-IQCLGLKLGFHDHVYVLT 249
           +I +F  M+ +G    D T   + +       V+E +L    +   G++   HDH     
Sbjct: 786 TISLFNQMLGSGIKPNDITFMHILSACSHAGAVEEGKLYFNSMSEFGVEPK-HDH---FA 841

Query: 250 GLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNG 290
            +V   S+ G++  A  +   +  P     N+ I G   NG
Sbjct: 842 CMVDLLSRAGDLNGAYQIITSLPFP----ANSSIWGALLNG 878


>gi|357136551|ref|XP_003569867.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g33760-like [Brachypodium distachyon]
          Length = 580

 Score =  432 bits (1111), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 220/500 (44%), Positives = 326/500 (65%), Gaps = 2/500 (0%)

Query: 287 TCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNS 346
           T  G   ++L  +R LL++A   +S     +         L     +H+  +  G  S+ 
Sbjct: 81  THQGLPLAALAFYRCLLSAALPFSSFAFTAVAKACADLSALRTGMTVHAHSILLGFGSDR 140

Query: 347 SVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQAS 406
            VLTAL  +YS+   +  ARKLFD   +K++ +WNAMI+GY QNGL E+ I +++EM+ +
Sbjct: 141 FVLTALVVLYSKCGRLPVARKLFDAIRDKNVVAWNAMISGYEQNGLAEQGIEVYKEMKVA 200

Query: 407 KVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEA 466
           K  P+ +T  + LSACAQ GA+ LG+ V   + S   + ++++ +AL++MYA+CG + +A
Sbjct: 201 KAVPDSMTFVATLSACAQAGALDLGREVERRIVSERMDISVFLGSALVNMYARCGVVDKA 260

Query: 467 RELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHA 526
           R+ FD++  ++ VTW +MI+GYG+HGHG EA++L+  M   G  P+ VTF++VL AC+HA
Sbjct: 261 RQWFDVLQERNVVTWTSMIAGYGMHGHGHEAIKLYHLMRCKGPPPNDVTFVAVLSACAHA 320

Query: 527 GLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIK-GLAVEPGPAVWG 585
           GL+ EG + F  M   +G  P  EHY  MVD+ GRAG+LE+A++FI+  +  +PGP VW 
Sbjct: 321 GLITEGRDAFACMKRVYGLAPRVEHYCSMVDMYGRAGRLEEAMQFIRDSMPGDPGPEVWT 380

Query: 586 ALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRK 645
           A+LGAC +HK+ +L    +E+L  L+PEN  YHVLLSNIY+          VR  + KR+
Sbjct: 381 AILGACKMHKNFSLGVEVAERLIRLEPENPSYHVLLSNIYALSGKMYHVEKVRNTMIKRR 440

Query: 646 LAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVE 705
           L K  G +LIE+GGT H+F  G++ H ++  IY  LE+L  ++  AG+  ET + LH++E
Sbjct: 441 LKKQIGYSLIELGGTSHLFRMGEKSHQKTREIYQYLEELVHRISAAGYMPETESVLHELE 500

Query: 706 EEEKELMMKVHSEKLAIAFGLIATEPG-TEIRIIKNLRVCLDCHTATKFISKVTGRVIVV 764
           EEE+E  ++ HSEKLA+A+GL+ +    T +R+IKNLR+C DCH A KF+S V  R I+V
Sbjct: 501 EEEREGALRYHSEKLAVAYGLMMSAGSTTPLRVIKNLRICSDCHLAIKFMSAVENREIIV 560

Query: 765 RDANRFHHFKGGVCSCGDYW 784
           RD +RFHHFK G CSC +YW
Sbjct: 561 RDKHRFHHFKDGKCSCLEYW 580



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 128/465 (27%), Positives = 213/465 (45%), Gaps = 41/465 (8%)

Query: 12  FLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPD 71
           + SLL        L Q HA++++ G    L  +TKLA+      A  YA  +  S P  D
Sbjct: 10  YSSLLLAGPRIGPLKQAHARLVVTGHSRCLPLITKLANLAVAAGAAPYAHLVATSHPASD 69

Query: 72  LFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRS---IGV 128
            FLF+ + R  ++  +P +++ FY  L  + AL   +F ++ V   A AC D S    G+
Sbjct: 70  SFLFSSLARAATHQGLPLAALAFYRCL-LSAALPFSSFAFTAV---AKACADLSALRTGM 125

Query: 129 LLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNC 188
            +H H+I+ G+GSD FV  ALV LY K   +  ARK+FD + +K+ V WN+MISG  +N 
Sbjct: 126 TVHAHSILLGFGSDRFVLTALVVLYSKCGRLPVARKLFDAIRDKNVVAWNAMISGYEQNG 185

Query: 189 CFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVL 248
             +  I V+ +M +      DS +  A L A A+   L LG E++   +       V++ 
Sbjct: 186 LAEQGIEVYKEM-KVAKAVPDSMTFVATLSACAQAGALDLGREVERRIVSERMDISVFLG 244

Query: 249 TGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAER 308
           + LV+ Y++CG V++A   F  +   ++++  +MI+GY  +G    +++L+  +      
Sbjct: 245 SALVNMYARCGVVDKARQWFDVLQERNVVTWTSMIAGYGMHGHGHEAIKLYHLMRCKGPP 304

Query: 309 VNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKL 368
            N  T V +           L+ C H+  +  G          +  VY     +E     
Sbjct: 305 PNDVTFVAV-----------LSACAHAGLITEG----RDAFACMKRVYGLAPRVE----- 344

Query: 369 FDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAI 428
                      + +M+  Y + G  EEA+   ++       P P   ++IL AC      
Sbjct: 345 ----------HYCSMVDMYGRAGRLEEAMQFIRDSMPGD--PGPEVWTAILGACKMHKNF 392

Query: 429 SLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLM 473
           SLG  V E +     E+  Y    L ++YA  G +    ++ + M
Sbjct: 393 SLGVEVAERLIRLEPENPSY-HVLLSNIYALSGKMYHVEKVRNTM 436



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 98/341 (28%), Positives = 161/341 (47%), Gaps = 14/341 (4%)

Query: 208 LDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELL 267
             S +  AV  A A++  LR GM +    + LGF    +VLT LV  YSKCG +  A  L
Sbjct: 103 FSSFAFTAVAKACADLSALRTGMTVHAHSILLGFGSDRFVLTALVVLYSKCGRLPVARKL 162

Query: 268 FRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHL 327
           F  I   ++++ NAMISGY  NG  E  + +++++  +    +S T V  +      G L
Sbjct: 163 FDAIRDKNVVAWNAMISGYEQNGLAEQGIEVYKEMKVAKAVPDSMTFVATLSACAQAGAL 222

Query: 328 HLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGY 387
            L   +    +   +  +  + +AL  +Y+R   ++ AR+ FD   E+++ +W +MIAGY
Sbjct: 223 DLGREVERRIVSERMDISVFLGSALVNMYARCGVVDKARQWFDVLQERNVVTWTSMIAGY 282

Query: 388 TQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKS-RNFESN 446
             +G   EAI L+  M+     PN VT  ++LSACA  G I+ G+     +K        
Sbjct: 283 GMHGHGHEAIKLYHLMRCKGPPPNDVTFVAVLSACAHAGLITEGRDAFACMKRVYGLAPR 342

Query: 447 IYVSTALIDMYAKCGNIVEARELF--DLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEM 504
           +    +++DMY + G + EA +     +        W  ++    +H    +   L  E+
Sbjct: 343 VEHYCSMVDMYGRAGRLEEAMQFIRDSMPGDPGPEVWTAILGACKMH----KNFSLGVEV 398

Query: 505 LHSGIR-----PSGVTFLSVLYACSHAGLVREGDEIFQSMI 540
               IR     PS    LS +YA S  G +   +++  +MI
Sbjct: 399 AERLIRLEPENPSYHVLLSNIYALS--GKMYHVEKVRNTMI 437


>gi|225442928|ref|XP_002265258.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39680-like [Vitis vinifera]
          Length = 703

 Score =  432 bits (1110), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 237/704 (33%), Positives = 392/704 (55%), Gaps = 7/704 (0%)

Query: 87  MPKSSICFYTH----LRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGS- 141
           MP   +   TH    L+ +T   P   T   +L  ++   +   G ++H H I++   + 
Sbjct: 1   MPTLRLLAPTHKPFLLKSSTVGHPLEHTIQ-LLKVSADTKNLKFGKMIHAHLIITNQATK 59

Query: 142 -DLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDM 200
            ++    +L++LY K   +  AR +FD M +++ V W ++++G   N    + + +F  M
Sbjct: 60  DNIVQVNSLINLYAKCDQIMVARILFDGMRKRNVVSWGALMAGYFHNGLVLEVLRLFKTM 119

Query: 201 VRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGE 260
           +       +    A ++ + ++  ++  G +     LK G   H YV   L+  YS+  +
Sbjct: 120 ISVDYMRPNEYIFATIISSCSDSGQVVEGWQCHGYALKSGLVFHQYVKNALICMYSRRSD 179

Query: 261 VERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPV 320
           V+ A  ++ ++   D+ S N +I+G   NG    +L +  +++      ++ T V    +
Sbjct: 180 VKGAMSVWYEVPGLDVFSYNIIINGLLENGYPSEALEVLDRMVDECIVWDNVTYVTAFGL 239

Query: 321 FYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASW 380
                 L L   +H    ++G   +S V +A+  +Y +   +  ARK+F+    K++ SW
Sbjct: 240 CSHLKDLRLGLQVHCRMFRTGAEYDSFVSSAIIDMYGKCGNILNARKVFNRLQTKNVVSW 299

Query: 381 NAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKS 440
            A++A Y+QNG  EEA++ F EM+   + PN  T + +L++CA + A+  GK +H  +K 
Sbjct: 300 TAILAAYSQNGCFEEALNFFPEMEVDGLLPNEYTFAVLLNSCAGISALGHGKLLHTRIKK 359

Query: 441 RNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQL 500
             FE +I V  ALI+MY+K G+I  A ++F  M  +  +TW+ MI G   HG G EAL +
Sbjct: 360 SGFEDHIIVGNALINMYSKSGSIEAAHKVFLEMICRDSITWSAMICGLSHHGLGREALVV 419

Query: 501 FSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILG 560
           F EML +   P  VTF+ VL AC+H G V+EG      ++   G +P  EHY C+V +L 
Sbjct: 420 FQEMLAAKECPHYVTFVGVLSACAHLGSVQEGFYYLNQLMKQTGIEPGVEHYTCIVGLLC 479

Query: 561 RAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVL 620
           +AG+L++A  F+K   V+     W  LL AC +H++  L +  +E + ++DP +VG ++L
Sbjct: 480 KAGRLDEAENFMKSTPVKWDVVAWRTLLSACHVHQNYGLGKKVAELVLQMDPGDVGTYIL 539

Query: 621 LSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAM 680
           LSN+Y+  + +     +R+++++R + K PG + IE+  + HVF S  + HP+S  IY  
Sbjct: 540 LSNMYAKAKRWDGVVKIRKLMRERNVKKEPGASWIEIRNSIHVFVSEGKTHPESNQIYEK 599

Query: 681 LEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKN 740
           +++L   +R  G+  +     HDVE+E+K   +  HSEKLAIA+GL+ T  G  IR+IKN
Sbjct: 600 VQELLTMIRPMGYVPDIAAVFHDVEDEQKREYVSYHSEKLAIAYGLMKTPSGAPIRVIKN 659

Query: 741 LRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           LR+C+DCH+A K ISKVT R+I+VRDANRFH F  G CSC DYW
Sbjct: 660 LRMCVDCHSAVKLISKVTNRMIIVRDANRFHCFGDGGCSCADYW 703



 Score =  179 bits (455), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 133/494 (26%), Positives = 242/494 (48%), Gaps = 30/494 (6%)

Query: 29  HAQIII--HGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNE 86
           HA +II     ++++  V  L +  +       AR LF  + K ++  +  ++ G+ +N 
Sbjct: 48  HAHLIITNQATKDNIVQVNSLINLYAKCDQIMVARILFDGMRKRNVVSWGALMAGYFHNG 107

Query: 87  MPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVG 146
           +    +  +  +     + P+ + ++ ++S+ S       G   HG+A+ SG     +V 
Sbjct: 108 LVLEVLRLFKTMISVDYMRPNEYIFATIISSCSDSGQVVEGWQCHGYALKSGLVFHQYVK 167

Query: 147 AALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGT 206
            AL+ +Y + S VK A  V+ ++P  D   +N +I+GL++N    +++ V   MV     
Sbjct: 168 NALICMYSRRSDVKGAMSVWYEVPGLDVFSYNIIINGLLENGYPSEALEVLDRMVDECIV 227

Query: 207 WLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAEL 266
           W + T V A     + +++LRLG+++ C   + G     +V + ++  Y KCG +  A  
Sbjct: 228 WDNVTYVTA-FGLCSHLKDLRLGLQVHCRMFRTGAEYDSFVSSAIIDMYGKCGNILNARK 286

Query: 267 LFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGH 326
           +F  +   +++S  A+++ Y+ NG  E +L  F ++           + GL+P  Y F  
Sbjct: 287 VFNRLQTKNVVSWTAILAAYSQNGCFEEALNFFPEM----------EVDGLLPNEYTFAV 336

Query: 327 LHLTNC-----------IHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEK 375
           L L +C           +H+   KSG   +  V  AL  +YS+   +EAA K+F E   +
Sbjct: 337 L-LNSCAGISALGHGKLLHTRIKKSGFEDHIIVGNALINMYSKSGSIEAAHKVFLEMICR 395

Query: 376 SLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLG-KWV 434
              +W+AMI G + +GL  EA+ +FQEM A+K  P+ VT   +LSACA LG++  G  ++
Sbjct: 396 DSITWSAMICGLSHHGLGREALVVFQEMLAAKECPHYVTFVGVLSACAHLGSVQEGFYYL 455

Query: 435 HELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVT-WNTMISGYGLH-- 491
           ++L+K    E  +   T ++ +  K G + EA         K +V  W T++S   +H  
Sbjct: 456 NQLMKQTGIEPGVEHYTCIVGLLCKAGRLDEAENFMKSTPVKWDVVAWRTLLSACHVHQN 515

Query: 492 -GHGLEALQLFSEM 504
            G G +  +L  +M
Sbjct: 516 YGLGKKVAELVLQM 529


>gi|225460338|ref|XP_002280412.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g13880-like [Vitis vinifera]
          Length = 802

 Score =  432 bits (1110), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 261/804 (32%), Positives = 410/804 (50%), Gaps = 24/804 (2%)

Query: 3   MKTP--QSRNLFLSLLKGAKTQSQLTQ--THAQIIIHG-----------FQNDLSTVTKL 47
           M+TP    +  +L L   + T ++L Q  T    +IHG           F+  L  +  L
Sbjct: 1   MQTPPHNPQPYYLGLPLDSVTYTKLVQCSTRTGSLIHGKLAHMHMIKTCFKPCLFLLNNL 60

Query: 48  AHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPD 107
            +       T  A+ LF  +PK ++  +N +I G++        +  +   R  + L  D
Sbjct: 61  LYMYCKCGETDVAKKLFDRMPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARM-SDLRLD 119

Query: 108 NFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFD 167
            FT+S  LS      D  +G L+H    VSG G  + +  +L+D+Y K   +  AR VF+
Sbjct: 120 KFTFSNALSVCGRTLDLRLGRLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFE 179

Query: 168 KMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAE--VQE 225
              E D+V WNS+I+G ++     + + +   M+R+G   L+S ++ + L A        
Sbjct: 180 SADELDSVSWNSLIAGYVRIGSNDEMLRLLVKMLRHGLN-LNSYALGSALKACGSNFSSS 238

Query: 226 LRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISG 285
           +  G  +    +KLG    V V T L+  Y+K G++E A  +F+ +  P+++  NAMI+G
Sbjct: 239 IECGKMLHGCAVKLGLDLDVVVGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAG 298

Query: 286 Y-----TCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKS 340
           +       +     ++ LF ++ +   + +  T   ++              IH+   K 
Sbjct: 299 FLQMETMADEFANEAMYLFFEMQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKY 358

Query: 341 GIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLF 400
            + S+  +  AL  +YS    +E   K F  + +  + SW ++I G+ QNG  E  ++LF
Sbjct: 359 NLQSDEFIGNALVELYSLSGSIEDGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLF 418

Query: 401 QEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKC 460
            E+  S   P+  T+S +LSACA L A+  G+ +H         +   +  + I MYAKC
Sbjct: 419 HELLFSGRKPDEFTISIMLSACANLAAVKSGEQIHAYAIKTGIGNFTIIQNSQICMYAKC 478

Query: 461 GNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVL 520
           G+I  A   F    +   V+W+ MIS    HG   EA+ LF  M  SGI P+ +TFL VL
Sbjct: 479 GDIDSANMTFKETKNPDIVSWSVMISSNAQHGCAKEAVDLFELMKGSGIAPNHITFLGVL 538

Query: 521 YACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPG 580
            ACSH GLV EG   F+ M  DHG  P  +H AC+VD+LGRAG+L +A  FI     E  
Sbjct: 539 VACSHGGLVEEGLRYFEIMKKDHGITPNVKHSACIVDLLGRAGRLAEAESFIMDSGFEGD 598

Query: 581 PAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQV 640
           P +W +LL AC +HK T+  +  +E++ EL+PE    +VLL NIY+     + A  +R +
Sbjct: 599 PVMWRSLLSACRVHKATDTGKRVAERVIELEPEAAASYVLLYNIYNDAGIQMPATEIRNL 658

Query: 641 VKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTA 700
           +K R + K PG + IEVG   H F +GD+ HP S  IY  LE++  ++++  +  E + +
Sbjct: 659 MKDRGVKKEPGLSWIEVGNVVHSFVAGDRSHPNSQVIYVQLEEMLEEIKKLDYIDEKLVS 718

Query: 701 LHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGR 760
                + +   M+  HSEKLA+ FG+I+      +R++KNLR C  CH   K  S++  R
Sbjct: 719 DASEPKHKDNSMVSYHSEKLAVTFGIISLPRSAPVRVMKNLRSCWHCHETMKLFSRLENR 778

Query: 761 VIVVRDANRFHHFKGGVCSCGDYW 784
            I++RD  RFH F+ G CSCGDYW
Sbjct: 779 EIILRDPIRFHRFRDGSCSCGDYW 802


>gi|356565095|ref|XP_003550780.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g74630-like [Glycine max]
          Length = 640

 Score =  432 bits (1110), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 232/625 (37%), Positives = 351/625 (56%), Gaps = 41/625 (6%)

Query: 162 ARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVA 221
           A ++F   P  DT + N++I  L  +     S+  F  + R      DS + A  L AVA
Sbjct: 55  ALRLFHHFPNPDTFMHNTLIRSLSLSQTPLSSLHPFIQLRRQPTLSPDSFTFAFALKAVA 114

Query: 222 EVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNA 281
             + LR G+++     + GF  H++V T L+S Y++CG+   A  +F ++  P++++ NA
Sbjct: 115 NSRHLRPGIQLHSQAFRHGFDAHIFVGTTLISMYAECGDSGSARRVFDEMSEPNVVTWNA 174

Query: 282 MISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSG 341
           +++     G  E +  +F                G +PV                     
Sbjct: 175 VLTAAFRCGDVEGAQDVF----------------GCMPV--------------------- 197

Query: 342 IVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQ 401
              N +    +   Y++  E+  AR++F E   +   SW+ MI G+  NG  +EA   F+
Sbjct: 198 --RNLTSWNGMLAGYAKAGELGLARRVFYEMPLRDEVSWSTMIVGFAHNGCFDEAFGFFR 255

Query: 402 EMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCG 461
           E+   ++  N V+++ +LSACAQ GA   GK +H  V+   F     V+ ALID Y+KCG
Sbjct: 256 ELLREEIRTNEVSLTGVLSACAQAGAFEFGKILHGFVEKAGFLYVGSVNNALIDTYSKCG 315

Query: 462 NIVEARELFDLMS-HKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVL 520
           N+  AR +F  M   +S V+W ++I+G  +HG G EA+QLF EM  SG+RP G+TF+S+L
Sbjct: 316 NVAMARLVFQNMPVARSIVSWTSIIAGLAMHGCGEEAIQLFHEMEESGVRPDGITFISLL 375

Query: 521 YACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPG 580
           YACSH+GLV EG  +F  M + +G +P  EHY CMVD+ GRA +L+KA EFI  + V P 
Sbjct: 376 YACSHSGLVEEGCGLFSKMKNLYGIEPAIEHYGCMVDLYGRAARLQKAYEFICEMPVSPN 435

Query: 581 PAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQV 640
             +W  LLGAC IH +  +A +   +L E+DP+N G HVLLSN+Y+    +   +++R+ 
Sbjct: 436 AIIWRTLLGACSIHGNIEMAELVKARLAEMDPDNSGDHVLLSNVYAVAGKWKDVSSIRRT 495

Query: 641 VKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMR-EAGFQTETVT 699
           + +  + K PG ++IE+    + F +G++ +  +   +  L ++  ++R EAG+  +  +
Sbjct: 496 MTEHSMKKTPGWSMIEIDKVIYGFVAGEKPNEVTEEAHEKLREIMLRLRTEAGYAPQLRS 555

Query: 700 ALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTG 759
            LHD+EEEEKE  +  HSEKLA AFG+     G  +RI+KNLRVC DCHT  K ISKV  
Sbjct: 556 VLHDIEEEEKEDSVSKHSEKLAAAFGIAKLPKGRILRIVKNLRVCGDCHTVMKLISKVYQ 615

Query: 760 RVIVVRDANRFHHFKGGVCSCGDYW 784
             I+VRD +RFH FK G CSC DYW
Sbjct: 616 VEIIVRDRSRFHSFKDGFCSCRDYW 640



 Score =  205 bits (522), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 141/490 (28%), Positives = 227/490 (46%), Gaps = 51/490 (10%)

Query: 12  FLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKL----AHRLSDFKATCYARALFFSI 67
           ++SLL    +     Q HAQI   G   D     KL    A  +SD  A  YA  LF   
Sbjct: 5   WVSLLSKCSSLKPTKQIHAQICKTGLHTDPLVFGKLLLHCAITISD--ALHYALRLFHHF 62

Query: 68  PKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIG 127
           P PD F+ N +IR  S ++ P SS+  +  LR+   L+PD+FT++F L A +       G
Sbjct: 63  PNPDTFMHNTLIRSLSLSQTPLSSLHPFIQLRRQPTLSPDSFTFAFALKAVANSRHLRPG 122

Query: 128 VLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKN 187
           + LH  A   G+ + +FVG  L+ +Y +     SAR+VFD+M E + V WN++++   + 
Sbjct: 123 IQLHSQAFRHGFDAHIFVGTTLISMYAECGDSGSARRVFDEMSEPNVVTWNAVLTAAFRC 182

Query: 188 CCFQDSIWVFGDM-VRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVY 246
              + +  VFG M VRN  +W                                       
Sbjct: 183 GDVEGAQDVFGCMPVRNLTSW--------------------------------------- 203

Query: 247 VLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASA 306
              G+++ Y+K GE+  A  +F ++   D +S + MI G+  NG  + +   FR+LL   
Sbjct: 204 --NGMLAGYAKAGELGLARRVFYEMPLRDEVSWSTMIVGFAHNGCFDEAFGFFRELLREE 261

Query: 307 ERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAAR 366
            R N  ++ G++      G       +H F  K+G +   SV  AL   YS+   +  AR
Sbjct: 262 IRTNEVSLTGVLSACAQAGAFEFGKILHGFVEKAGFLYVGSVNNALIDTYSKCGNVAMAR 321

Query: 367 KLFDESS-EKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQL 425
            +F      +S+ SW ++IAG   +G  EEAI LF EM+ S V P+ +T  S+L AC+  
Sbjct: 322 LVFQNMPVARSIVSWTSIIAGLAMHGCGEEAIQLFHEMEESGVRPDGITFISLLYACSHS 381

Query: 426 GAISLGKWVHELVKS-RNFESNIYVSTALIDMYAKCGNIVEARELF-DLMSHKSEVTWNT 483
           G +  G  +   +K+    E  I     ++D+Y +   + +A E   ++    + + W T
Sbjct: 382 GLVEEGCGLFSKMKNLYGIEPAIEHYGCMVDLYGRAARLQKAYEFICEMPVSPNAIIWRT 441

Query: 484 MISGYGLHGH 493
           ++    +HG+
Sbjct: 442 LLGACSIHGN 451


>gi|50080253|gb|AAT69588.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|222632650|gb|EEE64782.1| hypothetical protein OsJ_19638 [Oryza sativa Japonica Group]
          Length = 870

 Score =  431 bits (1109), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 254/732 (34%), Positives = 386/732 (52%), Gaps = 6/732 (0%)

Query: 51  LSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFT 110
           L  F    +A  +F  +P+ D+F +NV++ G+      + ++  Y  +     + PD +T
Sbjct: 141 LVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLW-AGMRPDVYT 199

Query: 111 YSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMP 170
           +  VL       D  +G  +H H +  G+G ++ V  ALV +Y K   + +ARKVFD M 
Sbjct: 200 FPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKVFDGMA 259

Query: 171 EKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGM 230
             D + WN+MI+G  +N   +  + +F  M+ N     +  ++ +V  A   + E+    
Sbjct: 260 VTDCISWNAMIAGHFENHECEAGLELFLTMLENE-VQPNLMTITSVTVASGMLSEVGFAK 318

Query: 231 EIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNG 290
           E+    +K GF   V     L+  Y+  G +  A  +F  +   D +S  AMISGY  NG
Sbjct: 319 EMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGYEKNG 378

Query: 291 KTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLT 350
             + +L ++  +       +  TI   +      G L +   +H      G +    V  
Sbjct: 379 FPDKALEVYALMELHNVSPDDVTIASALAACACLGRLDVGIKLHELAQNKGFIRYVVVAN 438

Query: 351 ALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAP 410
           AL  +Y++   ++ A ++F   +EK + SW++MIAG+  N  + EA+  F+ M    V P
Sbjct: 439 ALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFEALYYFRYM-LGHVKP 497

Query: 411 NPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELF 470
           N VT  + LSACA  GA+  GK +H  V      S  YV  AL+D+Y KCG    A   F
Sbjct: 498 NSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQTSYAWAQF 557

Query: 471 DLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVR 530
            + S K  V+WN M+SG+  HG G  AL LF++M+  G  P  VTF+++L ACS AG+V 
Sbjct: 558 SVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMVEMGEHPDEVTFVALLCACSRAGMVI 617

Query: 531 EGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGA 590
           +G E+F  M       P  +HYACMVD+L R G+L +A   I  + ++P  AVWGALL  
Sbjct: 618 QGWELFHMMTEKFSIVPNLKHYACMVDLLSRVGKLTEAYNLINRMPIKPDAAVWGALLNG 677

Query: 591 CMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAP 650
           C IH+   L  +A++ + EL+P +V YHVLL ++Y+    + Q A VR+ ++++ L +  
Sbjct: 678 CRIHRHVELGELAAKVILELEPNDVAYHVLLCDLYTDAGKWAQVARVRKTMREKGLEQDN 737

Query: 651 GCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKE 710
           GC+ +EV G  H F + D+ HPQ   I  +L  +  +M+  GF    V +L D E  E +
Sbjct: 738 GCSWVEVKGVTHAFLTDDESHPQIKEINVVLHGIYERMKACGFA--PVESLEDKEVSEDD 795

Query: 711 LMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRF 770
           ++   HSE+LA+AFGLI T PGT I + KN   C  CH   K IS++  R I VRD  + 
Sbjct: 796 ILCG-HSERLAVAFGLINTTPGTTISVTKNRYTCQSCHVIFKAISEIVRREITVRDTKQL 854

Query: 771 HHFKGGVCSCGD 782
           H FK G CSCGD
Sbjct: 855 HCFKDGDCSCGD 866



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 150/485 (30%), Positives = 251/485 (51%), Gaps = 14/485 (2%)

Query: 143 LFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVR 202
           L +G A++ +  +F  +  A +VF KMPE+D   WN M+ G  K    ++++ ++  M+ 
Sbjct: 131 LRLGNAMLSMLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLW 190

Query: 203 NGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVE 262
             G   D  +   VL     + + R+G E+    L+ GF D V VL  LV+ Y+KCG++ 
Sbjct: 191 -AGMRPDVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIV 249

Query: 263 RAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFY 322
            A  +F  +   D IS NAMI+G+  N + E+ L LF  +L +  + N  TI  +     
Sbjct: 250 AARKVFDGMAVTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASG 309

Query: 323 PFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNA 382
               +     +H F +K G   + +   +L  +Y+ L  M  A K+F     K   SW A
Sbjct: 310 MLSEVGFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTA 369

Query: 383 MIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRN 442
           MI+GY +NG  ++A+ ++  M+   V+P+ VT++S L+ACA LG + +G  +HEL +++ 
Sbjct: 370 MISGYEKNGFPDKALEVYALMELHNVSPDDVTIASALAACACLGRLDVGIKLHELAQNKG 429

Query: 443 FESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFS 502
           F   + V+ AL++MYAK  +I +A E+F  M+ K  V+W++MI+G+  +    EAL  F 
Sbjct: 430 FIRYVVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFEALYYFR 489

Query: 503 EMLHSGIRPSGVTFLSVLYACSHAGLVREGDEI----FQSMIHDHGFKPLAEHYACMVDI 558
            ML   ++P+ VTF++ L AC+  G +R G EI     +  I   G+ P A     ++D+
Sbjct: 490 YML-GHVKPNSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNA-----LLDL 543

Query: 559 LGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELD--PENVG 616
             + GQ   A      +  E     W  +L   + H   ++A     ++ E+   P+ V 
Sbjct: 544 YVKCGQTSYAWAQFS-VHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMVEMGEHPDEVT 602

Query: 617 YHVLL 621
           +  LL
Sbjct: 603 FVALL 607



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 124/470 (26%), Positives = 226/470 (48%), Gaps = 7/470 (1%)

Query: 27  QTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRG-FSNN 85
           + HA ++  GF +++  +  L    +       AR +F  +   D   +N +I G F N+
Sbjct: 218 EVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKVFDGMAVTDCISWNAMIAGHFENH 277

Query: 86  EMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFV 145
           E       F T L     + P+  T + V  A+    +      +HG A+  G+  D+  
Sbjct: 278 ECEAGLELFLTMLENE--VQPNLMTITSVTVASGMLSEVGFAKEMHGFAVKRGFAIDVAF 335

Query: 146 GAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGG 205
             +L+ +Y     +  A K+F +M  KD + W +MISG  KN     ++ V+  M  +  
Sbjct: 336 CNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGYEKNGFPDKALEVYALMELHNV 395

Query: 206 TWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAE 265
           +  D  ++A+ L A A +  L +G+++  L    GF  +V V   L+  Y+K   +++A 
Sbjct: 396 S-PDDVTIASALAACACLGRLDVGIKLHELAQNKGFIRYVVVANALLEMYAKSKHIDKAI 454

Query: 266 LLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFG 325
            +F+ +   D++S ++MI+G+  N ++  +L  FR +L    + NS T +  +      G
Sbjct: 455 EVFKFMAEKDVVSWSSMIAGFCFNHRSFEALYYFRYMLGHV-KPNSVTFIAALSACAATG 513

Query: 326 HLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIA 385
            L     IH++ L+ GI S   V  AL  +Y +  +   A   F   SEK + SWN M++
Sbjct: 514 ALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQTSYAWAQFSVHSEKDVVSWNIMLS 573

Query: 386 GYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLG-KWVHELVKSRNFE 444
           G+  +GL + A+SLF +M      P+ VT  ++L AC++ G +  G +  H + +  +  
Sbjct: 574 GFVAHGLGDIALSLFNQMVEMGEHPDEVTFVALLCACSRAGMVIQGWELFHMMTEKFSIV 633

Query: 445 SNIYVSTALIDMYAKCGNIVEARELFDLMSHKSE-VTWNTMISGYGLHGH 493
            N+     ++D+ ++ G + EA  L + M  K +   W  +++G  +H H
Sbjct: 634 PNLKHYACMVDLLSRVGKLTEAYNLINRMPIKPDAAVWGALLNGCRIHRH 683



 Score = 65.9 bits (159), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 44/175 (25%), Positives = 75/175 (42%), Gaps = 1/175 (0%)

Query: 403 MQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGN 462
           +++S   P+     ++   C    A+  G        + +    + +  A++ M  + G 
Sbjct: 87  LESSPEPPDEGAYVALFRLCEWRRAVDAGMRACARADAEHPSFGLRLGNAMLSMLVRFGE 146

Query: 463 IVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYA 522
           I  A  +F  M  +   +WN M+ GYG  G   EAL L+  ML +G+RP   TF  VL  
Sbjct: 147 IWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAGMRPDVYTFPCVLRT 206

Query: 523 CSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAV 577
           C      R G E+   ++   GF    +    +V +  + G +  A +   G+AV
Sbjct: 207 CGGIPDWRMGREVHAHVLR-FGFGDEVDVLNALVTMYAKCGDIVAARKVFDGMAV 260


>gi|224121210|ref|XP_002318526.1| predicted protein [Populus trichocarpa]
 gi|222859199|gb|EEE96746.1| predicted protein [Populus trichocarpa]
          Length = 552

 Score =  431 bits (1109), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 221/535 (41%), Positives = 321/535 (60%), Gaps = 15/535 (2%)

Query: 251 LVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVN 310
           +++ Y +  +++ A  LF  +   D++S NAM+SGY  NG  + +  +F ++       N
Sbjct: 32  MLTGYVRNRDLKTARALFERMPERDIVSWNAMLSGYAQNGFVDEAREIFYKMPLK----N 87

Query: 311 SSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFD 370
             +  GL+  +   G +     +    +   +VS + ++            +   R LFD
Sbjct: 88  GISWNGLLAAYVQNGRIEDAKRLFESKMDWTLVSWNCLMGGF---------VRKRRNLFD 138

Query: 371 ESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISL 430
              ++   SW+AMIAGY+QNG +EEA+  F EMQ      N  + +  LS C+ + A+ L
Sbjct: 139 NMPQRDSISWSAMIAGYSQNGCSEEALHFFVEMQRDCERLNRSSFTCALSTCSNIAALEL 198

Query: 431 GKWVH-ELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYG 489
           G+ +H  LVK+  +++  YV  AL+ MY KCG+I EAR+ F  +  K  V+WNTMI GY 
Sbjct: 199 GRQLHCRLVKA-GYQTGWYVGNALLAMYCKCGSIDEARDAFQEILEKDVVSWNTMIHGYA 257

Query: 490 LHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLA 549
            HG G EAL +F  M  +GIRP   T +SVL ACSHAGLV +G E F SM  D+G     
Sbjct: 258 RHGFGEEALTVFELMKTTGIRPDDATMVSVLAACSHAGLVDQGSEYFYSMNRDYGITAKL 317

Query: 550 EHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFE 609
            HY CMVD+LGRAGQLE+A   +K +  EP  A WGALLGA  IH +T L   A++ +FE
Sbjct: 318 VHYTCMVDLLGRAGQLEEAQNLMKNMPFEPDAATWGALLGASRIHGNTELGEKAAQIIFE 377

Query: 610 LDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQ 669
           ++P N G ++LLS +Y+A   +  A  +R  ++ + + K PG + +EV    H F  GD 
Sbjct: 378 MEPHNSGMYILLSKLYAASGRWSDAGKMRLEMRNKGVKKVPGYSWLEVQNKIHTFKVGDT 437

Query: 670 LHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIAT 729
            HP +  IY  LE+++ K+++ G+ + T    HDVEEEEK  M+K HSEKLA+A+G++  
Sbjct: 438 SHPHTDKIYTFLEEMDLKLKQEGYISSTNLVFHDVEEEEKVHMLKYHSEKLAVAYGILYI 497

Query: 730 EPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
             G  IR+IKNLRVC DCH A K+ISK+ GR+I++RD +RFH+F+GG CSC D+W
Sbjct: 498 PAGRPIRVIKNLRVCEDCHNAIKYISKIVGRLIILRDNHRFHYFEGGSCSCRDFW 552



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 112/388 (28%), Positives = 190/388 (48%), Gaps = 30/388 (7%)

Query: 162 ARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMV-RNGGTWLDSTSVAAVLPAV 220
           AR +FDKMPE+D   WN M++G ++N   + +  +F  M  R+  +W    S  A    V
Sbjct: 14  ARDLFDKMPERDLFSWNVMLTGYVRNRDLKTARALFERMPERDIVSWNAMLSGYAQNGFV 73

Query: 221 AEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVS-----FYSKC------------GEVER 263
            E +E+   M ++  G+        YV  G +      F SK             G V +
Sbjct: 74  DEAREIFYKMPLKN-GISWNGLLAAYVQNGRIEDAKRLFESKMDWTLVSWNCLMGGFVRK 132

Query: 264 AELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYP 323
              LF ++ + D IS +AMI+GY+ NG +E +L  F ++    ER+N S+    +     
Sbjct: 133 RRNLFDNMPQRDSISWSAMIAGYSQNGCSEEALHFFVEMQRDCERLNRSSFTCALSTCSN 192

Query: 324 FGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAM 383
              L L   +H   +K+G  +   V  AL  +Y +   ++ AR  F E  EK + SWN M
Sbjct: 193 IAALELGRQLHCRLVKAGYQTGWYVGNALLAMYCKCGSIDEARDAFQEILEKDVVSWNTM 252

Query: 384 IAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLG-KWVHELVKSRN 442
           I GY ++G  EEA+++F+ M+ + + P+  T+ S+L+AC+  G +  G ++ + + +   
Sbjct: 253 IHGYARHGFGEEALTVFELMKTTGIRPDDATMVSVLAACSHAGLVDQGSEYFYSMNRDYG 312

Query: 443 FESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSE-VTWNTMISGYGLHGH---GLEAL 498
             + +   T ++D+  + G + EA+ L   M  + +  TW  ++    +HG+   G +A 
Sbjct: 313 ITAKLVHYTCMVDLLGRAGQLEEAQNLMKNMPFEPDAATWGALLGASRIHGNTELGEKAA 372

Query: 499 QLFSEML--HSGIRPSGVTFLSVLYACS 524
           Q+  EM   +SG+       LS LYA S
Sbjct: 373 QIIFEMEPHNSGM----YILLSKLYAAS 396



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 89/367 (24%), Positives = 168/367 (45%), Gaps = 23/367 (6%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKN-----TALTPDNFTYSFV 114
           AR LF  +P+ DLF +NV++ G+  N   K++   +  + +       A+        FV
Sbjct: 14  ARDLFDKMPERDLFSWNVMLTGYVRNRDLKTARALFERMPERDIVSWNAMLSGYAQNGFV 73

Query: 115 LSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSW------------VKSA 162
             A        +   +  + +++ Y  +  +  A      K  W            V+  
Sbjct: 74  DEAREIFYKMPLKNGISWNGLLAAYVQNGRIEDAKRLFESKMDWTLVSWNCLMGGFVRKR 133

Query: 163 RKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAE 222
           R +FD MP++D++ W++MI+G  +N C ++++  F +M R+    L+ +S    L   + 
Sbjct: 134 RNLFDNMPQRDSISWSAMIAGYSQNGCSEEALHFFVEMQRDCER-LNRSSFTCALSTCSN 192

Query: 223 VQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAM 282
           +  L LG ++ C  +K G+    YV   L++ Y KCG ++ A   F++I+  D++S N M
Sbjct: 193 IAALELGRQLHCRLVKAGYQTGWYVGNALLAMYCKCGSIDEARDAFQEILEKDVVSWNTM 252

Query: 283 ISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHL-TNCIHSFCLKSG 341
           I GY  +G  E +L +F  +  +  R + +T+V ++      G +   +   +S     G
Sbjct: 253 IHGYARHGFGEEALTVFELMKTTGIRPDDATMVSVLAACSHAGLVDQGSEYFYSMNRDYG 312

Query: 342 IVSNSSVLTALSTVYSRLNEMEAARKLFDESS-EKSLASWNAMIAGYTQNG---LTEEAI 397
           I +     T +  +  R  ++E A+ L      E   A+W A++     +G   L E+A 
Sbjct: 313 ITAKLVHYTCMVDLLGRAGQLEEAQNLMKNMPFEPDAATWGALLGASRIHGNTELGEKAA 372

Query: 398 SLFQEMQ 404
            +  EM+
Sbjct: 373 QIIFEME 379



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 56/206 (27%), Positives = 91/206 (44%), Gaps = 34/206 (16%)

Query: 356 YSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTV 415
           Y R ++ + AR LFD+  E+ L SWN M+ GY +N   + A +LF+ M    +    V+ 
Sbjct: 5   YLRNHKFDLARDLFDKMPERDLFSWNVMLTGYVRNRDLKTARALFERMPERDI----VSW 60

Query: 416 SSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEA--------- 466
           +++LS  AQ G +   + +   +  +N  S       L+  Y + G I +A         
Sbjct: 61  NAMLSGYAQNGFVDEAREIFYKMPLKNGIS----WNGLLAAYVQNGRIEDAKRLFESKMD 116

Query: 467 -----------------RELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGI 509
                            R LFD M  +  ++W+ MI+GY  +G   EAL  F EM     
Sbjct: 117 WTLVSWNCLMGGFVRKRRNLFDNMPQRDSISWSAMIAGYSQNGCSEEALHFFVEMQRDCE 176

Query: 510 RPSGVTFLSVLYACSHAGLVREGDEI 535
           R +  +F   L  CS+   +  G ++
Sbjct: 177 RLNRSSFTCALSTCSNIAALELGRQL 202


>gi|356528338|ref|XP_003532761.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Glycine max]
          Length = 785

 Score =  431 bits (1109), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 240/710 (33%), Positives = 395/710 (55%), Gaps = 3/710 (0%)

Query: 13  LSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDL 72
           L L    K+     + H+ I  +G   D     KL     +       R +F  I    +
Sbjct: 64  LQLCAELKSLEDGKRVHSIISSNGMAIDEVLGAKLVFMYVNCGDLVKGRRIFDGILNDKI 123

Query: 73  FLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHG 132
           FL+N+++  ++     + S+  +  +++   +  D++T++ VL   +A         +HG
Sbjct: 124 FLWNLLMSEYAKIGNYRESVGLFEKMQE-LGIRGDSYTFTCVLKGFAASAKVRECKRVHG 182

Query: 133 HAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQD 192
           + +  G+GS   V  +L+  YFK   V+SAR +FD++ ++D V WNSMISG   N   ++
Sbjct: 183 YVLKLGFGSYNAVVNSLIAAYFKCGEVESARILFDELSDRDVVSWNSMISGCTMNGFSRN 242

Query: 193 SIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLV 252
            +  F  M+ N G  +DS ++  VL A A V  L LG  +   G+K GF   V     L+
Sbjct: 243 GLEFFIQML-NLGVDVDSATLVNVLVACANVGNLTLGRALHAYGVKAGFSGGVMFNNTLL 301

Query: 253 SFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSS 312
             YSKCG +  A  +F  +    ++S  ++I+ +   G    ++ LF ++ +   R +  
Sbjct: 302 DMYSKCGNLNGANEVFVKMGETTIVSWTSIIAAHVREGLHYEAIGLFDEMQSKGLRPDIY 361

Query: 313 TIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDES 372
            +  ++        L     +H+   K+ + SN  V  AL  +Y++   ME A  +F + 
Sbjct: 362 AVTSVVHACACSNSLDKGREVHNHIKKNNMGSNLPVSNALMNMYAKCGSMEEANLIFSQL 421

Query: 373 SEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGK 432
             K++ SWN MI GY+QN L  EA+ LF +MQ  ++ P+ VT++ +L ACA L A+  G+
Sbjct: 422 PVKNIVSWNTMIGGYSQNSLPNEALQLFLDMQ-KQLKPDDVTMACVLPACAGLAALEKGR 480

Query: 433 WVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHG 492
            +H  +  + + S+++V+ AL+DMY KCG +V A++LFD++  K  + W  MI+GYG+HG
Sbjct: 481 EIHGHILRKGYFSDLHVACALVDMYVKCGLLVLAQQLFDMIPKKDMILWTVMIAGYGMHG 540

Query: 493 HGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHY 552
            G EA+  F +M  +GI P   +F S+LYAC+H+GL++EG ++F SM  +   +P  EHY
Sbjct: 541 FGKEAISTFEKMRVAGIEPEESSFTSILYACTHSGLLKEGWKLFDSMKSECNIEPKLEHY 600

Query: 553 ACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDP 612
           ACMVD+L R+G L +A +FI+ + ++P  A+WGALL  C IH D  LA   +E +FEL+P
Sbjct: 601 ACMVDLLIRSGNLSRAYKFIETMPIKPDAAIWGALLSGCRIHHDVELAEKVAEHIFELEP 660

Query: 613 ENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHP 672
           EN  Y+VLL+N+Y+    + +   +++ + K  L    GC+ IEV G  ++F +GD  HP
Sbjct: 661 ENTRYYVLLANVYAEAEKWEEVKKIQRRISKGGLKNDQGCSWIEVQGKFNIFFAGDTSHP 720

Query: 673 QSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAI 722
           Q+  I ++L KL  KM   G+  +   AL + ++  KE+++  HSEKLA+
Sbjct: 721 QAKMIDSLLRKLTMKMNRGGYSNKIKYALINADDRLKEVLLCAHSEKLAM 770



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 56/214 (26%), Positives = 98/214 (45%), Gaps = 4/214 (1%)

Query: 381 NAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKS 440
           NA I  + + G    A+ L    Q S++  N  T  S+L  CA+L ++  GK VH ++ S
Sbjct: 28  NAKICKFCEMGDLRNAMKLLSRSQRSELELN--TYCSVLQLCAELKSLEDGKRVHSIISS 85

Query: 441 RNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQL 500
                +  +   L+ MY  CG++V+ R +FD + +     WN ++S Y   G+  E++ L
Sbjct: 86  NGMAIDEVLGAKLVFMYVNCGDLVKGRRIFDGILNDKIFLWNLLMSEYAKIGNYRESVGL 145

Query: 501 FSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILG 560
           F +M   GIR    TF  VL   + +  VRE   +    +   GF         ++    
Sbjct: 146 FEKMQELGIRGDSYTFTCVLKGFAASAKVRECKRV-HGYVLKLGFGSYNAVVNSLIAAYF 204

Query: 561 RAGQLEKALEFIKGLAVEPGPAVWGALLGACMIH 594
           + G++E A      L+ +     W +++  C ++
Sbjct: 205 KCGEVESARILFDELS-DRDVVSWNSMISGCTMN 237


>gi|356567494|ref|XP_003551954.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49710-like [Glycine max]
          Length = 722

 Score =  431 bits (1108), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 241/652 (36%), Positives = 382/652 (58%), Gaps = 12/652 (1%)

Query: 142 DLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMV 201
           ++F    L++ Y K S +  AR+VFD++P+ D V +N++I+        + ++ +F + V
Sbjct: 74  NVFSYNTLINAYAKHSLIHLARQVFDEIPQPDIVSYNTLIAAYADRGECRPALRLFAE-V 132

Query: 202 RNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEV 261
           R     LD  +++ V+ A  +  ++ L  ++ C  +  G+  +  V   +++ YS+ G +
Sbjct: 133 RELRFGLDGFTLSGVIIACGD--DVGLVRQLHCFVVVCGYDCYASVNNAVLACYSRKGFL 190

Query: 262 ERAELLFRDIVR---PDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLI 318
             A  +FR++      D +S NAMI     + +   ++ LFR+++    +V+  T+  ++
Sbjct: 191 NEARRVFREMGEGGGRDEVSWNAMIVACGQHREGLEAVELFREMVRRGLKVDMFTMASVL 250

Query: 319 PVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRL-NEMEAARKLFDESSEKSL 377
             F     L      H   +KSG   NS V + L  +YS+    M   RK+F+E +   L
Sbjct: 251 TAFTCVKDLVGGMQFHGMMIKSGFHGNSHVGSGLIDLYSKCAGGMVECRKVFEEIAAPDL 310

Query: 378 ASWNAMIAGYTQ-NGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHE 436
             WN MI+G++Q   L+E+ I  F+EMQ +   P+  +   + SAC+ L + S+GK VH 
Sbjct: 311 VLWNTMISGFSQYEDLSEDGIWCFREMQHNGFHPDDCSFVCVTSACSNLSSPSVGKQVHA 370

Query: 437 L-VKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGL 495
           L +KS    + + V+ AL+ MY+KCGN+ +AR +FD M   + V+ N+MI+GY  HG  +
Sbjct: 371 LAIKSDIPYNRVSVNNALVAMYSKCGNVHDARRVFDTMPEHNMVSLNSMIAGYAQHGVEV 430

Query: 496 EALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACM 555
           E+L+LF  ML   I P+ +TF++VL AC H G V EG + F  M      +P AEHY+CM
Sbjct: 431 ESLRLFELMLQKDIAPNTITFIAVLSACVHTGKVEEGQKYFNMMKERFRIEPEAEHYSCM 490

Query: 556 VDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENV 615
           +D+LGRAG+L++A   I+ +   PG   W  LLGAC  H +  LA  A+ +  +L+P N 
Sbjct: 491 IDLLGRAGKLKEAERIIETMPFNPGSIEWATLLGACRKHGNVELAVKAANEFLQLEPYNA 550

Query: 616 GYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQST 675
             +V+LSN+Y++   + +AATV++++++R + K PGC+ IE+    HVF + D  HP   
Sbjct: 551 APYVMLSNMYASAARWEEAATVKRLMRERGVKKKPGCSWIEIDKKVHVFVAEDTSHPMIK 610

Query: 676 AIYAMLEKLNGKMREAGFQTETVTAL---HDVEEEEKELMMKVHSEKLAIAFGLIATEPG 732
            I+  + ++  KM++AG+  +   AL    +VE +EKE  +  HSEKLA+AFGLI+TE  
Sbjct: 611 EIHVYMGEILRKMKQAGYVPDIRWALVKDEEVEPDEKERRLLYHSEKLAVAFGLISTEEW 670

Query: 733 TEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
             I ++KNLR+C DCH A K IS +TGR I VRD +RFH FK G CSCGDYW
Sbjct: 671 VPILVVKNLRICGDCHNAIKLISAITGREITVRDTHRFHCFKEGHCSCGDYW 722



 Score =  196 bits (497), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 137/474 (28%), Positives = 241/474 (50%), Gaps = 17/474 (3%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           AR +F  IP+PD+  +N +I  +++    + ++  +  +R+      D FT S V+ A  
Sbjct: 94  ARQVFDEIPQPDIVSYNTLIAAYADRGECRPALRLFAEVRE-LRFGLDGFTLSGVIIA-- 150

Query: 120 ACCDRSIGVL--LHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPE---KDT 174
             C   +G++  LH   +V GY     V  A++  Y +  ++  AR+VF +M E   +D 
Sbjct: 151 --CGDDVGLVRQLHCFVVVCGYDCYASVNNAVLACYSRKGFLNEARRVFREMGEGGGRDE 208

Query: 175 VLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQC 234
           V WN+MI    ++    +++ +F +MVR  G  +D  ++A+VL A   V++L  GM+   
Sbjct: 209 VSWNAMIVACGQHREGLEAVELFREMVRR-GLKVDMFTMASVLTAFTCVKDLVGGMQFHG 267

Query: 235 LGLKLGFHDHVYVLTGLVSFYSKC-GEVERAELLFRDIVRPDLISCNAMISGYT-CNGKT 292
           + +K GFH + +V +GL+  YSKC G +     +F +I  PDL+  N MISG++     +
Sbjct: 268 MMIKSGFHGNSHVGSGLIDLYSKCAGGMVECRKVFEEIAAPDLVLWNTMISGFSQYEDLS 327

Query: 293 ESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNS-SVLTA 351
           E  +  FR++  +    +  + V +           +   +H+  +KS I  N  SV  A
Sbjct: 328 EDGIWCFREMQHNGFHPDDCSFVCVTSACSNLSSPSVGKQVHALAIKSDIPYNRVSVNNA 387

Query: 352 LSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPN 411
           L  +YS+   +  AR++FD   E ++ S N+MIAGY Q+G+  E++ LF+ M    +APN
Sbjct: 388 LVAMYSKCGNVHDARRVFDTMPEHNMVSLNSMIAGYAQHGVEVESLRLFELMLQKDIAPN 447

Query: 412 PVTVSSILSACAQLGAISLGKWVHELVKSR-NFESNIYVSTALIDMYAKCGNIVEARELF 470
            +T  ++LSAC   G +  G+    ++K R   E      + +ID+  + G + EA  + 
Sbjct: 448 TITFIAVLSACVHTGKVEEGQKYFNMMKERFRIEPEAEHYSCMIDLLGRAGKLKEAERII 507

Query: 471 DLMS-HKSEVTWNTMISGYGLHGHGLEALQLFSEMLH-SGIRPSGVTFLSVLYA 522
           + M  +   + W T++     HG+   A++  +E L       +    LS +YA
Sbjct: 508 ETMPFNPGSIEWATLLGACRKHGNVELAVKAANEFLQLEPYNAAPYVMLSNMYA 561



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 88/289 (30%), Positives = 150/289 (51%), Gaps = 7/289 (2%)

Query: 242 HDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQ 301
           + +V+    L++ Y+K   +  A  +F +I +PD++S N +I+ Y   G+   +LRLF +
Sbjct: 72  YPNVFSYNTLINAYAKHSLIHLARQVFDEIPQPDIVSYNTLIAAYADRGECRPALRLFAE 131

Query: 302 LLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNE 361
           +      ++  T+ G+I        + L   +H F +  G    +SV  A+   YSR   
Sbjct: 132 VRELRFGLDGFTLSGVI--IACGDDVGLVRQLHCFVVVCGYDCYASVNNAVLACYSRKGF 189

Query: 362 MEAARKLFDESSE---KSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSI 418
           +  AR++F E  E   +   SWNAMI    Q+    EA+ LF+EM    +  +  T++S+
Sbjct: 190 LNEARRVFREMGEGGGRDEVSWNAMIVACGQHREGLEAVELFREMVRRGLKVDMFTMASV 249

Query: 419 LSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKC-GNIVEARELFDLMSHKS 477
           L+A   +  +  G   H ++    F  N +V + LID+Y+KC G +VE R++F+ ++   
Sbjct: 250 LTAFTCVKDLVGGMQFHGMMIKSGFHGNSHVGSGLIDLYSKCAGGMVECRKVFEEIAAPD 309

Query: 478 EVTWNTMISGYGLHGH-GLEALQLFSEMLHSGIRPSGVTFLSVLYACSH 525
            V WNTMISG+  +     + +  F EM H+G  P   +F+ V  ACS+
Sbjct: 310 LVLWNTMISGFSQYEDLSEDGIWCFREMQHNGFHPDDCSFVCVTSACSN 358



 Score =  122 bits (307), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 106/378 (28%), Positives = 174/378 (46%), Gaps = 40/378 (10%)

Query: 103 ALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFS-WVKS 161
            L  D FT + VL+A +   D   G+  HG  I SG+  +  VG+ L+DLY K +  +  
Sbjct: 238 GLKVDMFTMASVLTAFTCVKDLVGGMQFHGMMIKSGFHGNSHVGSGLIDLYSKCAGGMVE 297

Query: 162 ARKVFDKMPEKDTVLWNSMISGLMK-NCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAV 220
            RKVF+++   D VLWN+MISG  +     +D IW F +M  N G   D  S   V  A 
Sbjct: 298 CRKVFEEIAAPDLVLWNTMISGFSQYEDLSEDGIWCFREMQHN-GFHPDDCSFVCVTSAC 356

Query: 221 AEVQELRLGMEIQCLGLKLGF-HDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISC 279
           + +    +G ++  L +K    ++ V V   LV+ YSKCG V  A  +F  +   +++S 
Sbjct: 357 SNLSSPSVGKQVHALAIKSDIPYNRVSVNNALVAMYSKCGNVHDARRVFDTMPEHNMVSL 416

Query: 280 NAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLK 339
           N+MI+GY  +G    SLRLF  +L      N+ T + +           L+ C+H+  ++
Sbjct: 417 NSMIAGYAQHGVEVESLRLFELMLQKDIAPNTITFIAV-----------LSACVHTGKVE 465

Query: 340 SGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISL 399
            G                  N M+   ++  E+       ++ MI    + G  +EA  +
Sbjct: 466 EG--------------QKYFNMMKERFRIEPEAEH-----YSCMIDLLGRAGKLKEAERI 506

Query: 400 FQEMQASKVAPNPVTVSSILSACAQLGAISLG-KWVHELVKSRNFESNIYVSTALIDMYA 458
            + M  +   P  +  +++L AC + G + L  K  +E ++   + +  YV   L +MYA
Sbjct: 507 IETMPFN---PGSIEWATLLGACRKHGNVELAVKAANEFLQLEPYNAAPYV--MLSNMYA 561

Query: 459 KCGNIVEARELFDLMSHK 476
                 EA  +  LM  +
Sbjct: 562 SAARWEEAATVKRLMRER 579



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 69/299 (23%), Positives = 131/299 (43%), Gaps = 39/299 (13%)

Query: 333 IHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMI-------- 384
           +H+   KS I  ++ +    + +YS+   +  A+  FD +   ++ S+N +I        
Sbjct: 31  LHALYFKSLIPPSTYLSNHFTLLYSKCGSLHNAQTSFDLTQYPNVFSYNTLINAYAKHSL 90

Query: 385 -----------------------AGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSA 421
                                  A Y   G    A+ LF E++  +   +  T+S ++ A
Sbjct: 91  IHLARQVFDEIPQPDIVSYNTLIAAYADRGECRPALRLFAEVRELRFGLDGFTLSGVIIA 150

Query: 422 CAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSH---KSE 478
           C     + L + +H  V    ++    V+ A++  Y++ G + EAR +F  M     + E
Sbjct: 151 CGD--DVGLVRQLHCFVVVCGYDCYASVNNAVLACYSRKGFLNEARRVFREMGEGGGRDE 208

Query: 479 VTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQS 538
           V+WN MI   G H  GLEA++LF EM+  G++    T  SVL A +    +  G + F  
Sbjct: 209 VSWNAMIVACGQHREGLEAVELFREMVRRGLKVDMFTMASVLTAFTCVKDLVGGMQ-FHG 267

Query: 539 MIHDHGFKPLAEHYACMVDILGR-AGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKD 596
           M+   GF   +   + ++D+  + AG + +  +  + +A  P   +W  ++     ++D
Sbjct: 268 MMIKSGFHGNSHVGSGLIDLYSKCAGGMVECRKVFEEIAA-PDLVLWNTMISGFSQYED 325



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 76/300 (25%), Positives = 133/300 (44%), Gaps = 16/300 (5%)

Query: 27  QTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYA-----RALFFSIPKPDLFLFNVIIRG 81
           Q H  +I  GF  +    + +   L D  + C       R +F  I  PDL L+N +I G
Sbjct: 264 QFHGMMIKSGFHGN----SHVGSGLIDLYSKCAGGMVECRKVFEEIAAPDLVLWNTMISG 319

Query: 82  FSNNE-MPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYG 140
           FS  E + +  I  +  ++ N    PD+ ++  V SA S     S+G  +H  AI S   
Sbjct: 320 FSQYEDLSEDGIWCFREMQHN-GFHPDDCSFVCVTSACSNLSSPSVGKQVHALAIKSDIP 378

Query: 141 SD-LFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGD 199
            + + V  ALV +Y K   V  AR+VFD MPE + V  NSMI+G  ++    +S+ +F  
Sbjct: 379 YNRVSVNNALVAMYSKCGNVHDARRVFDTMPEHNMVSLNSMIAGYAQHGVEVESLRLFEL 438

Query: 200 MVRNGGTWLDSTSVAAVLPAVAEVQELRLGME-IQCLGLKLGFHDHVYVLTGLVSFYSKC 258
           M++      ++ +  AVL A     ++  G +    +  +          + ++    + 
Sbjct: 439 MLQK-DIAPNTITFIAVLSACVHTGKVEEGQKYFNMMKERFRIEPEAEHYSCMIDLLGRA 497

Query: 259 GEVERAELLFRDI-VRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGL 317
           G+++ AE +   +   P  I    ++     +G  E +++   + L   E  N++  V L
Sbjct: 498 GKLKEAERIIETMPFNPGSIEWATLLGACRKHGNVELAVKAANEFL-QLEPYNAAPYVML 556



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 50/217 (23%), Positives = 83/217 (38%), Gaps = 38/217 (17%)

Query: 414 TVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVE-------- 465
           T  ++L AC     +  GK +H L        + Y+S     +Y+KCG++          
Sbjct: 11  TFRNLLKACIAQRDLITGKTLHALYFKSLIPPSTYLSNHFTLLYSKCGSLHNAQTSFDLT 70

Query: 466 -----------------------ARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFS 502
                                  AR++FD +     V++NT+I+ Y   G    AL+LF+
Sbjct: 71  QYPNVFSYNTLINAYAKHSLIHLARQVFDEIPQPDIVSYNTLIAAYADRGECRPALRLFA 130

Query: 503 EMLHSGIRPSGVTFLSVLYAC-SHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGR 561
           E+        G T   V+ AC    GLVR+        +   G+   A     ++    R
Sbjct: 131 EVRELRFGLDGFTLSGVIIACGDDVGLVRQ----LHCFVVVCGYDCYASVNNAVLACYSR 186

Query: 562 AGQLEKALEFIKGLAVEPG--PAVWGALLGACMIHKD 596
            G L +A    + +    G     W A++ AC  H++
Sbjct: 187 KGFLNEARRVFREMGEGGGRDEVSWNAMIVACGQHRE 223


>gi|297850056|ref|XP_002892909.1| hypothetical protein ARALYDRAFT_889039 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297338751|gb|EFH69168.1| hypothetical protein ARALYDRAFT_889039 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1038

 Score =  431 bits (1108), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 241/766 (31%), Positives = 410/766 (53%), Gaps = 3/766 (0%)

Query: 20   KTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVII 79
            K +S   Q   Q+I  G ++ L+    L     +     YA  +F  I + D   +N I+
Sbjct: 275  KDESLGRQIIGQVIKSGLESKLAVENSLISMFGNMGNVDYANYIFNQISERDTISWNSIV 334

Query: 80   RGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGY 139
              ++ N   + S   +  +R+      ++ T S +LS       +  G  +HG  +  G+
Sbjct: 335  AAYAQNGHIEESSRIFNLMRRFHD-EVNSTTVSTLLSVLGDVDHQKWGRGIHGLVVKMGF 393

Query: 140  GSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGD 199
             S + V   L+ +Y      + A  VF +MP KD + WNS+++  + +    D++ +   
Sbjct: 394  DSVVCVCNTLLRMYAGAGRSEEADLVFKQMPTKDLISWNSLMASFVNDGRSLDALGILCS 453

Query: 200  MVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCG 259
            M+R G + ++  +  + L A    +    G  +  L +  G  D+  +   LVS Y K G
Sbjct: 454  MIRTGKS-VNYVTFTSALAACFSPEFFDKGRILHGLVVVSGLFDNQIIGNALVSMYGKIG 512

Query: 260  EVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIP 319
             +  +  +   + R D+++ NA+I GY  N   + +L  F+ L       N  T+V ++ 
Sbjct: 513  GMSTSRRVLLQMPRRDVVAWNALIGGYAENEDPDKALAAFQTLRVEGVSANYITVVSVLS 572

Query: 320  V-FYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLA 378
                P   L     +H++ + +G  S+  V  +L T+Y++  ++ +++ LF+    +S+ 
Sbjct: 573  ACLVPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRSII 632

Query: 379  SWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELV 438
            +WNA++A    +G  EE + L  +M++  ++ +  + S  LSA A+L  +  G+ +H L 
Sbjct: 633  TWNAILAANAHHGHGEEVLKLVSKMRSFGLSLDQFSFSEGLSAAAKLAVLEEGQQLHGLA 692

Query: 439  KSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEAL 498
                FE + ++  A  DMY+KCG I E  ++     ++S  +WN +IS  G HG+  E  
Sbjct: 693  VKLGFELDCFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVC 752

Query: 499  QLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDI 558
            + F EML  GI+P  VTF+S+L ACSH GLV +G   +  +  D G +P  EH  C++D+
Sbjct: 753  ETFHEMLEMGIKPGHVTFVSLLTACSHGGLVDQGLAYYDMIAKDFGLEPAIEHCICVIDL 812

Query: 559  LGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYH 618
            LGR+G+L +A  FI  + ++P   VW +LL +C IH+D +  R A+E L +L+PE+    
Sbjct: 813  LGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHRDLDRGRKAAENLSKLEPEDDSVF 872

Query: 619  VLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIY 678
            VL SN+++    +     VR+ +  + + K   C+ +++      F  GD+ HPQ+  IY
Sbjct: 873  VLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIY 932

Query: 679  AMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRII 738
            A LE +   ++E+G+  +T  AL D +EE+KE  +  HSE+LA+A+ L++T  G+ +RI 
Sbjct: 933  AKLEDIKKLIKESGYVADTSQALQDTDEEQKEHNLWNHSERLALAYALMSTPEGSTVRIF 992

Query: 739  KNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
            KNLR+C DCH+  KF+S+V GR IV+RD  RFHHF+ G+CSC DYW
Sbjct: 993  KNLRICSDCHSVYKFVSRVIGRRIVLRDQYRFHHFESGLCSCKDYW 1038



 Score =  199 bits (506), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 145/540 (26%), Positives = 247/540 (45%), Gaps = 12/540 (2%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           AR LF  +P  +   +N ++ G     +    + F+  +  +  + P     SFV+++  
Sbjct: 112 ARYLFDKMPVRNEVSWNTMMSGIVRVGLYLEGMEFFQKM-CDLGIKPS----SFVIASLV 166

Query: 120 ACCDRS-----IGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDT 174
             C RS      GV +HG    SG  SD++V  A++ LY  +  V  +RKVF++MP+++ 
Sbjct: 167 TACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNV 226

Query: 175 VLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQC 234
           V W S++ G       ++ I ++  M R  G   +  S++ V+ +   +++  LG +I  
Sbjct: 227 VSWTSLMVGYSDKGEPEEVIDIYKSM-RGEGVECNENSMSLVISSCGLLKDESLGRQIIG 285

Query: 235 LGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTES 294
             +K G    + V   L+S +   G V+ A  +F  I   D IS N++++ Y  NG  E 
Sbjct: 286 QVIKSGLESKLAVENSLISMFGNMGNVDYANYIFNQISERDTISWNSIVAAYAQNGHIEE 345

Query: 295 SLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALST 354
           S R+F  +    + VNS+T+  L+ V     H      IH   +K G  S   V   L  
Sbjct: 346 SSRIFNLMRRFHDEVNSTTVSTLLSVLGDVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLR 405

Query: 355 VYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVT 414
           +Y+     E A  +F +   K L SWN+++A +  +G + +A+ +   M  +  + N VT
Sbjct: 406 MYAGAGRSEEADLVFKQMPTKDLISWNSLMASFVNDGRSLDALGILCSMIRTGKSVNYVT 465

Query: 415 VSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMS 474
            +S L+AC        G+ +H LV       N  +  AL+ MY K G +  +R +   M 
Sbjct: 466 FTSALAACFSPEFFDKGRILHGLVVVSGLFDNQIIGNALVSMYGKIGGMSTSRRVLLQMP 525

Query: 475 HKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDE 534
            +  V WN +I GY  +    +AL  F  +   G+  + +T +SVL AC   G + E  +
Sbjct: 526 RRDVVAWNALIGGYAENEDPDKALAAFQTLRVEGVSANYITVVSVLSACLVPGDLLERGK 585

Query: 535 IFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIH 594
              + I   GF+        ++ +  + G L  + +   GL        W A+L A   H
Sbjct: 586 PLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLD-NRSIITWNAILAANAHH 644



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 121/460 (26%), Positives = 223/460 (48%), Gaps = 4/460 (0%)

Query: 149 LVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWL 208
           L+++Y KF  VK AR +FDKMP ++ V WN+M+SG+++   + + +  F  M  + G   
Sbjct: 99  LINMYTKFGRVKPARYLFDKMPVRNEVSWNTMMSGIVRVGLYLEGMEFFQKMC-DLGIKP 157

Query: 209 DSTSVAAVLPAVAEVQEL-RLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELL 267
            S  +A+++ A      + R G+++     K G    VYV T ++  Y   G V  +  +
Sbjct: 158 SSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKV 217

Query: 268 FRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHL 327
           F ++   +++S  +++ GY+  G+ E  + +++ +       N +++  +I         
Sbjct: 218 FEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKSMRGEGVECNENSMSLVISSCGLLKDE 277

Query: 328 HLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGY 387
            L   I    +KSG+ S  +V  +L +++  +  ++ A  +F++ SE+   SWN+++A Y
Sbjct: 278 SLGRQIIGQVIKSGLESKLAVENSLISMFGNMGNVDYANYIFNQISERDTISWNSIVAAY 337

Query: 388 TQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNI 447
            QNG  EE+  +F  M+      N  TVS++LS    +     G+ +H LV    F+S +
Sbjct: 338 AQNGHIEESSRIFNLMRRFHDEVNSTTVSTLLSVLGDVDHQKWGRGIHGLVVKMGFDSVV 397

Query: 448 YVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHS 507
            V   L+ MYA  G   EA  +F  M  K  ++WN++++ +   G  L+AL +   M+ +
Sbjct: 398 CVCNTLLRMYAGAGRSEEADLVFKQMPTKDLISWNSLMASFVNDGRSLDALGILCSMIRT 457

Query: 508 GIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEK 567
           G   + VTF S L AC       +G  I   ++   G          +V + G+ G +  
Sbjct: 458 GKSVNYVTFTSALAACFSPEFFDKG-RILHGLVVVSGLFDNQIIGNALVSMYGKIGGMST 516

Query: 568 ALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKL 607
           +   +  +      A W AL+G    ++D + A  A + L
Sbjct: 517 SRRVLLQMPRRDVVA-WNALIGGYAENEDPDKALAAFQTL 555



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 69/263 (26%), Positives = 136/263 (51%), Gaps = 11/263 (4%)

Query: 333 IHSFCLKSGIVSNSSVLT-ALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNG 391
           +H+ C+K G+V  S + T  L  +Y++   ++ AR LFD+   ++  SWN M++G  + G
Sbjct: 80  LHALCVK-GLVRLSVLHTNTLINMYTKFGRVKPARYLFDKMPVRNEVSWNTMMSGIVRVG 138

Query: 392 LTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAI-SLGKWVHELVKSRNFESNIYVS 450
           L  E +  FQ+M    + P+   ++S+++AC + G++   G  VH  V      S++YVS
Sbjct: 139 LYLEGMEFFQKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVS 198

Query: 451 TALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIR 510
           TA++ +Y   G +  +R++F+ M  ++ V+W +++ GY   G   E + ++  M   G+ 
Sbjct: 199 TAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKSMRGEGVE 258

Query: 511 PSGVTFLSVLYACSHAGLVRE---GDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEK 567
            +  +   V+ +C   GL+++   G +I   +I       LA   + ++ + G  G ++ 
Sbjct: 259 CNENSMSLVISSC---GLLKDESLGRQIIGQVIKSGLESKLAVENS-LISMFGNMGNVDY 314

Query: 568 ALEFIKGLAVEPGPAVWGALLGA 590
           A  +I     E     W +++ A
Sbjct: 315 A-NYIFNQISERDTISWNSIVAA 336



 Score = 72.8 bits (177), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 43/124 (34%), Positives = 67/124 (54%), Gaps = 8/124 (6%)

Query: 423 AQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWN 482
           +Q+   + G+ +H L        ++  +  LI+MY K G +  AR LFD M  ++EV+WN
Sbjct: 69  SQITRETTGRALHALCVKGLVRLSVLHTNTLINMYTKFGRVKPARYLFDKMPVRNEVSWN 128

Query: 483 TMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAG-LVREGDEIFQSMIH 541
           TM+SG    G  LE ++ F +M   GI+PS     S++ AC  +G + REG ++      
Sbjct: 129 TMMSGIVRVGLYLEGMEFFQKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQV------ 182

Query: 542 DHGF 545
            HGF
Sbjct: 183 -HGF 185


>gi|225452956|ref|XP_002279032.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39350
           [Vitis vinifera]
 gi|296082987|emb|CBI22288.3| unnamed protein product [Vitis vinifera]
          Length = 676

 Score =  431 bits (1108), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 228/643 (35%), Positives = 376/643 (58%), Gaps = 6/643 (0%)

Query: 20  KTQSQLTQTHAQIIIHGFQNDLST---VTKLAHRLSDFKATCYARALFFSIPKPDLFLFN 76
           K+     Q HA  I  G  +   +   ++ LA   + F    +AR LF  +  P LF +N
Sbjct: 32  KSIPNTKQIHAHTITLGLLSSPYSHHLLSSLAAAYAMFGCAPHARKLFDELRNPSLFSWN 91

Query: 77  VIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIV 136
            +IR ++N+ +   ++  +  +  +    PDN+TY FV+ A        +G L+H   ++
Sbjct: 92  AMIRMYTNSGLSYDALGLFVQMLASGRRWPDNYTYPFVIKACGDYLLPEMGALIHARTVM 151

Query: 137 SGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWV 196
           SG+ SD FV  +L+ +Y     ++ AR+VFD M E+  V WN+MI+G  KN C ++++ V
Sbjct: 152 SGFDSDAFVQNSLMAMYMNCGEMEVARRVFDLMRERTLVSWNTMINGYFKNGCVKEALMV 211

Query: 197 FGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYS 256
           F  M+   G   D  +V +VLP  + ++EL +G  +  L       + + V   L+  Y+
Sbjct: 212 FDWMI-GKGIEPDCATVVSVLPVCSYLKELEVGRRVHALVEVKNLGEDISVWNSLLDMYA 270

Query: 257 KCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVG 316
           KCG ++ A+++F ++ + D++S   M++GY  NG   S+L L + +   + + N  T+  
Sbjct: 271 KCGNMDEAQMIFYEMDKRDVVSWTTMMNGYILNGDARSALLLCQMMQFESVKPNFVTLAS 330

Query: 317 LIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKS 376
           ++        L    C+H + ++  + S   V TAL  +Y++ N +  + ++F ++S++ 
Sbjct: 331 VLSACASLYSLKHGRCLHGWAIRQKLESEVIVETALIDMYAKCNNVNLSFRVFSKTSKQR 390

Query: 377 LASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHE 436
            A WNA+I+G   NGL+ +AI LF++M    V PN  T++S+L A A L  +   + +H 
Sbjct: 391 TAPWNAIISGCIHNGLSRKAIELFKQMLMEAVDPNDATLNSLLPAYAFLTDLQQARNMHG 450

Query: 437 LVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSE--VTWNTMISGYGLHGHG 494
            +    F S I V+T LID+Y+KCG++  A  +F+ +  K +  +TW+ +I+GYG+HGHG
Sbjct: 451 YLIRSGFLSRIEVATILIDIYSKCGSLESAHNIFNGIPKKDKDIITWSAIIAGYGMHGHG 510

Query: 495 LEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYAC 554
             A+ LF +M+ SG++P+ +TF S+L+ACSHAGLV EG  +F+ M+ D+      +HY C
Sbjct: 511 ETAISLFDQMVQSGVKPNEITFTSILHACSHAGLVDEGLGLFKFMLEDNQMSLRTDHYTC 570

Query: 555 MVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPEN 614
           ++D+LGRAG+LE+A E I+ +A  P  AVWGALLG+C+IH++  L  VA++ LFEL+P N
Sbjct: 571 VIDLLGRAGRLEEAYELIRTMAFRPNHAVWGALLGSCVIHENVELGEVAAKWLFELEPGN 630

Query: 615 VGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEV 657
            G +VLL+NIYSA   +  A  VR ++    L K P  +LIEV
Sbjct: 631 TGNYVLLANIYSAVGRWRDAEHVRLMMNNIGLRKTPAHSLIEV 673


>gi|356543252|ref|XP_003540076.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Glycine max]
          Length = 934

 Score =  431 bits (1108), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 250/759 (32%), Positives = 403/759 (53%), Gaps = 6/759 (0%)

Query: 27  QTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNE 86
           Q    +I  G    +S    L     +  +   A  +F  + + D   +N II    +N 
Sbjct: 181 QVLGSVIKSGLDTTVSVANSLISMFGNCDSIEEASCVFDDMKERDTISWNSIITASVHNG 240

Query: 87  MPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVG 146
             + S+ +++ +R   A T D  T S +L    +  +   G  LHG  + SG  S++ V 
Sbjct: 241 HCEKSLEYFSQMRYTHAKT-DYITISALLPVCGSAQNLRWGRGLHGMVVKSGLESNVCVC 299

Query: 147 AALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGT 206
            +L+ +Y +    + A  VF KM E+D + WNSM++  + N  +  ++ +  +M++    
Sbjct: 300 NSLLSMYSQAGKSEDAEFVFHKMRERDLISWNSMMASHVDNGNYPRALELLIEMLQTRKA 359

Query: 207 WLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAEL 266
             +  +    L A   ++ L++   +    + LG H ++ +   LV+ Y K G +  A+ 
Sbjct: 360 -TNYVTFTTALSACYNLETLKI---VHAFVILLGLHHNLIIGNALVTMYGKFGSMAAAQR 415

Query: 267 LFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFY-PFG 325
           + + +   D ++ NA+I G+  N +  +++  F  L      VN  TIV L+  F  P  
Sbjct: 416 VCKIMPDRDEVTWNALIGGHADNKEPNAAIEAFNLLREEGVPVNYITIVNLLSAFLSPDD 475

Query: 326 HLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIA 385
            L     IH+  + +G    + V ++L T+Y++  ++  +  +FD  + K+ ++WNA+++
Sbjct: 476 LLDHGMPIHAHIVVAGFELETFVQSSLITMYAQCGDLNTSNYIFDVLANKNSSTWNAILS 535

Query: 386 GYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFES 445
                G  EEA+ L  +M+   +  +  + S   +    L  +  G+ +H L+    FES
Sbjct: 536 ANAHYGPGEEALKLIIKMRNDGIHLDQFSFSVAHAIIGNLTLLDEGQQLHSLIIKHGFES 595

Query: 446 NIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEML 505
           N YV  A +DMY KCG I +   +      +S+ +WN +IS    HG   +A + F EML
Sbjct: 596 NDYVLNATMDMYGKCGEIDDVFRILPQPRSRSQRSWNILISALARHGFFQQAREAFHEML 655

Query: 506 HSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQL 565
             G+RP  VTF+S+L ACSH GLV EG   F SM    G     EH  C++D+LGRAG+L
Sbjct: 656 DLGLRPDHVTFVSLLSACSHGGLVDEGLAYFSSMSTKFGVPTGIEHCVCIIDLLGRAGKL 715

Query: 566 EKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIY 625
            +A  FI  + V P   VW +LL AC IH +  LAR A+++LFELD  +   +VL SN+ 
Sbjct: 716 TEAENFINKMPVPPTDLVWRSLLAACKIHGNLELARKAADRLFELDSSDDSAYVLYSNVC 775

Query: 626 SAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLN 685
           ++ R +     VR+ ++   + K P C+ +++      F  GDQ HPQ+  IYA LE+L 
Sbjct: 776 ASTRRWRDVENVRKQMESHNIKKKPACSWVKLKNQVTTFGMGDQYHPQNAEIYAKLEELK 835

Query: 686 GKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCL 745
             +REAG+  +T  +L D +EE+KE  +  HSE++A+AFGLI +  G+ +RI KNLRVC 
Sbjct: 836 KIIREAGYMPDTSYSLQDTDEEQKEHNLWNHSERIALAFGLINSSEGSPLRIFKNLRVCG 895

Query: 746 DCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           DCH+  K +S++ GR I++RDA RFHHF  G CSC DYW
Sbjct: 896 DCHSVFKMVSQIIGRKIILRDAYRFHHFSSGKCSCSDYW 934



 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 163/604 (26%), Positives = 288/604 (47%), Gaps = 20/604 (3%)

Query: 27  QTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNE 86
           Q HA +I  G   D+   T L H    F        +F  I +P++  +  ++ G++ N 
Sbjct: 80  QVHAHVIKCGLACDVFVGTSLLHFYGTFGWVAEVDMVFKEIEEPNIVSWTSLMVGYAYNG 139

Query: 87  MPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVG 146
             K  +  Y  LR++     +N   + V+ +     D+ +G  + G  I SG  + + V 
Sbjct: 140 CVKEVMSVYRRLRRDGVYCNEN-AMATVIRSCGVLVDKMLGYQVLGSVIKSGLDTTVSVA 198

Query: 147 AALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGT 206
            +L+ ++     ++ A  VFD M E+DT+ WNS+I+  + N   + S+  F  M R    
Sbjct: 199 NSLISMFGNCDSIEEASCVFDDMKERDTISWNSIITASVHNGHCEKSLEYFSQM-RYTHA 257

Query: 207 WLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAEL 266
             D  +++A+LP     Q LR G  +  + +K G   +V V   L+S YS+ G+ E AE 
Sbjct: 258 KTDYITISALLPVCGSAQNLRWGRGLHGMVVKSGLESNVCVCNSLLSMYSQAGKSEDAEF 317

Query: 267 LFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGH 326
           +F  +   DLIS N+M++ +  NG    +L L  ++L + +  N  T    +   Y   +
Sbjct: 318 VFHKMRERDLISWNSMMASHVDNGNYPRALELLIEMLQTRKATNYVTFTTALSACY---N 374

Query: 327 LHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAG 386
           L     +H+F +  G+  N  +  AL T+Y +   M AA+++     ++   +WNA+I G
Sbjct: 375 LETLKIVHAFVILLGLHHNLIIGNALVTMYGKFGSMAAAQRVCKIMPDRDEVTWNALIGG 434

Query: 387 YTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSA-CAQLGAISLGKWVHELVKSRNFES 445
           +  N     AI  F  ++   V  N +T+ ++LSA  +    +  G  +H  +    FE 
Sbjct: 435 HADNKEPNAAIEAFNLLREEGVPVNYITIVNLLSAFLSPDDLLDHGMPIHAHIVVAGFEL 494

Query: 446 NIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEML 505
             +V ++LI MYA+CG++  +  +FD++++K+  TWN ++S    +G G EAL+L  +M 
Sbjct: 495 ETFVQSSLITMYAQCGDLNTSNYIFDVLANKNSSTWNAILSANAHYGPGEEALKLIIKMR 554

Query: 506 HSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQL 565
           + GI     +F        +  L+ EG ++  S+I  HGF+         +D+ G+ G++
Sbjct: 555 NDGIHLDQFSFSVAHAIIGNLTLLDEGQQL-HSLIIKHGFESNDYVLNATMDMYGKCGEI 613

Query: 566 EKALEFIKGLAVEPGP-----AVWGALLGACMIHKDTNLARVASEKLFELD--PENVGYH 618
           +     +      P P       W  L+ A   H     AR A  ++ +L   P++V + 
Sbjct: 614 DDVFRIL------PQPRSRSQRSWNILISALARHGFFQQAREAFHEMLDLGLRPDHVTFV 667

Query: 619 VLLS 622
            LLS
Sbjct: 668 SLLS 671



 Score =  216 bits (550), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 151/550 (27%), Positives = 268/550 (48%), Gaps = 27/550 (4%)

Query: 52  SDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTY 111
           S F +  +A+ +F  +P+ +   +N ++ GF      + ++ F+ H+ ++  + P     
Sbjct: 3   SKFGSIEHAQHVFDKMPERNEASWNNLMSGFVRVGWYQKAMQFFCHMLEH-GVRPS---- 57

Query: 112 SFVLSAASACCDRSIGVL------LHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKV 165
           S+V ++    CDRS G +      +H H I  G   D+FVG +L+  Y  F WV     V
Sbjct: 58  SYVAASLVTACDRS-GCMTEGAFQVHAHVIKCGLACDVFVGTSLLHFYGTFGWVAEVDMV 116

Query: 166 FDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQE 225
           F ++ E + V W S++ G   N C ++ + V+  + R+G  + +  ++A V+ +   + +
Sbjct: 117 FKEIEEPNIVSWTSLMVGYAYNGCVKEVMSVYRRLRRDG-VYCNENAMATVIRSCGVLVD 175

Query: 226 LRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISG 285
             LG ++    +K G    V V   L+S +  C  +E A  +F D+   D IS N++I+ 
Sbjct: 176 KMLGYQVLGSVIKSGLDTTVSVANSLISMFGNCDSIEEASCVFDDMKERDTISWNSIITA 235

Query: 286 YTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSN 345
              NG  E SL  F Q+  +  + +  TI  L+PV     +L     +H   +KSG+ SN
Sbjct: 236 SVHNGHCEKSLEYFSQMRYTHAKTDYITISALLPVCGSAQNLRWGRGLHGMVVKSGLESN 295

Query: 346 SSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQA 405
             V  +L ++YS+  + E A  +F +  E+ L SWN+M+A +  NG    A+ L  EM  
Sbjct: 296 VCVCNSLLSMYSQAGKSEDAEFVFHKMRERDLISWNSMMASHVDNGNYPRALELLIEMLQ 355

Query: 406 SKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVE 465
           ++ A N VT ++ LSAC  L  +   K VH  V       N+ +  AL+ MY K G++  
Sbjct: 356 TRKATNYVTFTTALSACYNLETL---KIVHAFVILLGLHHNLIIGNALVTMYGKFGSMAA 412

Query: 466 ARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSH 525
           A+ +  +M  + EVTWN +I G+  +     A++ F+ +   G+  + +T +++L A   
Sbjct: 413 AQRVCKIMPDRDEVTWNALIGGHADNKEPNAAIEAFNLLREEGVPVNYITIVNLLSA--- 469

Query: 526 AGLVREGDEIFQSM-IHDH----GFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPG 580
              +   D +   M IH H    GF+      + ++ +  + G L  +  +I  +     
Sbjct: 470 --FLSPDDLLDHGMPIHAHIVVAGFELETFVQSSLITMYAQCGDLNTS-NYIFDVLANKN 526

Query: 581 PAVWGALLGA 590
            + W A+L A
Sbjct: 527 SSTWNAILSA 536



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 123/479 (25%), Positives = 230/479 (48%), Gaps = 13/479 (2%)

Query: 152 LYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDST 211
           +Y KF  ++ A+ VFDKMPE++   WN+++SG ++   +Q ++  F  M+ +G     S+
Sbjct: 1   MYSKFGSIEHAQHVFDKMPERNEASWNNLMSGFVRVGWYQKAMQFFCHMLEHGVR--PSS 58

Query: 212 SVAAVLPAVAEVQELRL--GMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFR 269
            VAA L    +          ++    +K G    V+V T L+ FY   G V   +++F+
Sbjct: 59  YVAASLVTACDRSGCMTEGAFQVHAHVIKCGLACDVFVGTSLLHFYGTFGWVAEVDMVFK 118

Query: 270 DIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHL 329
           +I  P+++S  +++ GY  NG  +  + ++R+L       N + +  +I          L
Sbjct: 119 EIEEPNIVSWTSLMVGYAYNGCVKEVMSVYRRLRRDGVYCNENAMATVIRSCGVLVDKML 178

Query: 330 TNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQ 389
              +    +KSG+ +  SV  +L +++   + +E A  +FD+  E+   SWN++I     
Sbjct: 179 GYQVLGSVIKSGLDTTVSVANSLISMFGNCDSIEEASCVFDDMKERDTISWNSIITASVH 238

Query: 390 NGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYV 449
           NG  E+++  F +M+ +    + +T+S++L  C     +  G+ +H +V     ESN+ V
Sbjct: 239 NGHCEKSLEYFSQMRYTHAKTDYITISALLPVCGSAQNLRWGRGLHGMVVKSGLESNVCV 298

Query: 450 STALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGI 509
             +L+ MY++ G   +A  +F  M  +  ++WN+M++ +  +G+   AL+L  EML +  
Sbjct: 299 CNSLLSMYSQAGKSEDAEFVFHKMRERDLISWNSMMASHVDNGNYPRALELLIEMLQTRK 358

Query: 510 RPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKAL 569
             + VTF + L AC +     E  +I  + +   G          +V + G+ G +  A 
Sbjct: 359 ATNYVTFTTALSACYNL----ETLKIVHAFVILLGLHHNLIIGNALVTMYGKFGSMAAAQ 414

Query: 570 EFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGY-HVLLSNIYSA 627
              K +  +     W AL+G    H D      A E    L  E V   ++ + N+ SA
Sbjct: 415 RVCK-IMPDRDEVTWNALIGG---HADNKEPNAAIEAFNLLREEGVPVNYITIVNLLSA 469


>gi|449467070|ref|XP_004151248.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Cucumis sativus]
          Length = 617

 Score =  431 bits (1108), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 204/427 (47%), Positives = 281/427 (65%)

Query: 358 RLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSS 417
           ++ + E A KLF E  E+++ SW +MI GY Q G ++EAI LF EM+ + + PN VTV +
Sbjct: 191 KMGDAEGAYKLFAEMPERNVRSWTSMIGGYAQCGKSKEAIDLFLEMEDAGLLPNEVTVVA 250

Query: 418 ILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKS 477
           +L ACA +G + LG+ +H+      +E NI V   LIDMY KCG + +A  +FD M  ++
Sbjct: 251 VLVACADMGNLVLGRRIHDFSNRSGYEKNIRVCNTLIDMYVKCGCLEDACRIFDNMEERT 310

Query: 478 EVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQ 537
            V+W+ MI+G   HG   +AL LF++M+++G++P+ VTF+ +L+ACSH G+V +G + F 
Sbjct: 311 VVSWSAMIAGLAAHGRAEDALALFNKMINTGVKPNAVTFIGILHACSHMGMVEKGRKYFA 370

Query: 538 SMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDT 597
           SM  D+G  P  EHY CMVD+  RAG L++A EFI  + + P   VWGALLG C +HK+ 
Sbjct: 371 SMTRDYGIVPRIEHYGCMVDLFSRAGLLQEAHEFIMNMPIAPNGVVWGALLGGCKVHKNI 430

Query: 598 NLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEV 657
            LA  A+  L +LDP N GY+V+LSNIY+    +   A VR++++ R + K PG + I V
Sbjct: 431 KLAEEATRHLSKLDPLNDGYYVVLSNIYAEAGRWEDVARVRKLMRDRGVKKTPGWSSIMV 490

Query: 658 GGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHS 717
            G  + F +GD  HPQ+  I+   EKL  +M+  G+   T   L D+EE++KE  +  HS
Sbjct: 491 EGVVYNFVAGDDTHPQTEEIFQTWEKLLQRMKLKGYVPNTSVVLLDMEEDQKEKFLYRHS 550

Query: 718 EKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGV 777
           EKLA+ FGLI T PGT IRI+KNLRVC DCH A K IS V+ R IVVRD NRFH FK G 
Sbjct: 551 EKLAVVFGLIKTTPGTVIRIMKNLRVCEDCHAALKIISVVSTREIVVRDRNRFHCFKNGS 610

Query: 778 CSCGDYW 784
           CSCGDYW
Sbjct: 611 CSCGDYW 617



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 129/540 (23%), Positives = 228/540 (42%), Gaps = 89/540 (16%)

Query: 15  LLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFL 74
           LL    +  +L Q HA ++          ++++A   +   +  YA+ +F  +   ++  
Sbjct: 21  LLHNFTSPFELKQLHAHLLKTNSPLSSLPLSRVASVCAFNSSFSYAKLIFQLLDASEVTH 80

Query: 75  FNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHA 134
           +N  +R F+  + P  +I  +  LR+   ++PD++T SFVL A S   D   G ++HG+ 
Sbjct: 81  WNTCLRSFAEGDSPADAISLFYRLRE-FDISPDHYTCSFVLKACSRLLDVRNGKIVHGYV 139

Query: 135 IVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSI 194
              G  S++F+   +V LY     +  ARKVFDKMP++D + WN MI+ L+K    + + 
Sbjct: 140 EKLGLQSNMFLQNMIVHLYALCGEIGVARKVFDKMPQRDVITWNIMIARLVKMGDAEGAY 199

Query: 195 WVFGDMV-RNGGTWL-----------------------------DSTSVAAVLPAVAEVQ 224
            +F +M  RN  +W                              +  +V AVL A A++ 
Sbjct: 200 KLFAEMPERNVRSWTSMIGGYAQCGKSKEAIDLFLEMEDAGLLPNEVTVVAVLVACADMG 259

Query: 225 ELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMIS 284
            L LG  I     + G+  ++ V   L+  Y KCG +E A  +F ++    ++S +AMI+
Sbjct: 260 NLVLGRRIHDFSNRSGYEKNIRVCNTLIDMYVKCGCLEDACRIFDNMEERTVVSWSAMIA 319

Query: 285 GYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVS 344
           G   +G+ E +L LF +++ +  + N+ T +G+           L  C H          
Sbjct: 320 GLAAHGRAEDALALFNKMINTGVKPNAVTFIGI-----------LHACSH---------- 358

Query: 345 NSSVLTALSTVYSRLNEMEAARKLF-----DESSEKSLASWNAMIAGYTQNGLTEEAISL 399
                         +  +E  RK F     D      +  +  M+  +++ GL +EA   
Sbjct: 359 --------------MGMVEKGRKYFASMTRDYGIVPRIEHYGCMVDLFSRAGLLQEAHEF 404

Query: 400 FQEMQASKVAPNPVTVSSILSACAQLGAISLG-KWVHELVKSRNFESNIYVSTALIDMYA 458
              M    +APN V   ++L  C     I L  +    L K        YV   L ++YA
Sbjct: 405 IMNM---PIAPNGVVWGALLGGCKVHKNIKLAEEATRHLSKLDPLNDGYYV--VLSNIYA 459

Query: 459 KCG---NIVEARELFDLMSHKSEVTWNTM---------ISGYGLHGHGLEALQLFSEMLH 506
           + G   ++   R+L      K    W+++         ++G   H    E  Q + ++L 
Sbjct: 460 EAGRWEDVARVRKLMRDRGVKKTPGWSSIMVEGVVYNFVAGDDTHPQTEEIFQTWEKLLQ 519



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 75/297 (25%), Positives = 132/297 (44%), Gaps = 41/297 (13%)

Query: 333 IHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGL 392
           +H+  LK+    +S  L+ +++V +  +    A+ +F       +  WN  +  + +   
Sbjct: 34  LHAHLLKTNSPLSSLPLSRVASVCAFNSSFSYAKLIFQLLDASEVTHWNTCLRSFAEGDS 93

Query: 393 TEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTA 452
             +AISLF  ++   ++P+  T S +L AC++L  +  GK VH  V+    +SN+++   
Sbjct: 94  PADAISLFYRLREFDISPDHYTCSFVLKACSRLLDVRNGKIVHGYVEKLGLQSNMFLQNM 153

Query: 453 LIDMYAKCGNIVEARELFDLMSHKSEVTWN------------------------------ 482
           ++ +YA CG I  AR++FD M  +  +TWN                              
Sbjct: 154 IVHLYALCGEIGVARKVFDKMPQRDVITWNIMIARLVKMGDAEGAYKLFAEMPERNVRSW 213

Query: 483 -TMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIH 541
            +MI GY   G   EA+ LF EM  +G+ P+ VT ++VL AC+       G+ +    IH
Sbjct: 214 TSMIGGYAQCGKSKEAIDLFLEMEDAGLLPNEVTVVAVLVACADM-----GNLVLGRRIH 268

Query: 542 D----HGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIH 594
           D     G++        ++D+  + G LE A      +  E     W A++     H
Sbjct: 269 DFSNRSGYEKNIRVCNTLIDMYVKCGCLEDACRIFDNME-ERTVVSWSAMIAGLAAH 324


>gi|347954524|gb|AEP33762.1| organelle transcript processing 82, partial [Hesperis matronalis]
          Length = 672

 Score =  431 bits (1108), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 247/654 (37%), Positives = 374/654 (57%), Gaps = 44/654 (6%)

Query: 156 FSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAA 215
           F  +  A  VF+ +PE + ++WN M  G   +     ++ ++  M+ + G   +  +   
Sbjct: 22  FDGLPYAISVFETIPEPNQLIWNIMFRGHALSSDPVSALKLYVVMI-SLGLLPNFFTFPF 80

Query: 216 VLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLF-----RD 270
           +L + A+ +  + G +I    LKLGF   +YV T L+S Y++ G +E A+ +F     RD
Sbjct: 81  LLKSCAKSKTFKEGQQIHGHVLKLGFDLDLYVHTSLISMYAQNGRLEDAQKVFDRSSHRD 140

Query: 271 IVR--------------------------PDLISCNAMISGYTCNGKTESSLRLFRQLLA 304
           +V                            D++S NAMISGY   G  + +L LF++++ 
Sbjct: 141 VVSYTALITGYASRGYIESAQKMFDEIPIKDVVSWNAMISGYAETGNYKKALELFKEMMK 200

Query: 305 SAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEA 364
           +  + + ST+  ++      G + L   +HS+    G  SN  ++ AL  +YS+  E+E 
Sbjct: 201 TNVKPDESTMATVVSACAQSGSIELGRQVHSWINDHGFGSNLKIVNALIDLYSKCGEVET 260

Query: 365 ARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQ 424
           A +L +  S K + SWN +I GYT   L +EA+ LFQEM  S   PN VT+ SIL ACA 
Sbjct: 261 ACELLEGLSNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAH 320

Query: 425 LGAISLGKWVHELVKSR-------NFESNIYVSTALIDMYAKCGNIVEARELFDLMS-HK 476
           LGAI +G+W+H  +  +       N  S   + T+LIDMYAKCG+I  A ++ D  + ++
Sbjct: 321 LGAIDIGRWIHVYIDKKLKGVVVTNASS---LRTSLIDMYAKCGDIDAAPQVSDSSAFNR 377

Query: 477 SEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIF 536
           S  TWN MI G+ +HG    A  +FS M  +GI P  +TF+ +L ACSH+G++  G  IF
Sbjct: 378 SLSTWNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRNIF 437

Query: 537 QSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKD 596
           +SM  D+   P  EHY CM+D+LG +G  ++A E I  + +EP   +W +LL AC IH +
Sbjct: 438 RSMRQDYNITPKLEHYGCMIDLLGHSGLFKEAEEMINTMPMEPDGVIWCSLLKACKIHGN 497

Query: 597 TNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKL-AKAPGCTLI 655
             L    ++KL +++PEN G +VLLSNIY+    + +   +R ++  + +  K PGC+ I
Sbjct: 498 LELGESFAKKLIKIEPENPGSYVLLSNIYATAGKWNEVXKIRTLLNDKGMKKKVPGCSSI 557

Query: 656 EVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKV 715
           E+    H F  GD+LHPQ+  IY MLE++   + EAGF  +T   L ++EEE KE  ++ 
Sbjct: 558 EIDSVVHEFIIGDKLHPQNREIYGMLEEMEVLLEEAGFVPDTSEVLQEMEEEWKEGALRH 617

Query: 716 HSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANR 769
           HSEKLAIAFGLI+T+PGT++ I+KNLRVC +CH ATK ISK+  R I+ RD  R
Sbjct: 618 HSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTR 671



 Score =  219 bits (557), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 150/533 (28%), Positives = 275/533 (51%), Gaps = 46/533 (8%)

Query: 54  FKATCYARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSF 113
           F    YA ++F +IP+P+  ++N++ RG + +  P S++  Y  +  +  L P+ FT+ F
Sbjct: 22  FDGLPYAISVFETIPEPNQLIWNIMFRGHALSSDPVSALKLYV-VMISLGLLPNFFTFPF 80

Query: 114 VLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLY------------FKFS---- 157
           +L + +       G  +HGH +  G+  DL+V  +L+ +Y            F  S    
Sbjct: 81  LLKSCAKSKTFKEGQQIHGHVLKLGFDLDLYVHTSLISMYAQNGRLEDAQKVFDRSSHRD 140

Query: 158 ---------------WVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVR 202
                          +++SA+K+FD++P KD V WN+MISG  +   ++ ++ +F +M++
Sbjct: 141 VVSYTALITGYASRGYIESAQKMFDEIPIKDVVSWNAMISGYAETGNYKKALELFKEMMK 200

Query: 203 NGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVE 262
                 D +++A V+ A A+   + LG ++       GF  ++ ++  L+  YSKCGEVE
Sbjct: 201 TN-VKPDESTMATVVSACAQSGSIELGRQVHSWINDHGFGSNLKIVNALIDLYSKCGEVE 259

Query: 263 RAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFY 322
            A  L   +   D+IS N +I GYT     + +L LF+++L S E  N  T++ ++P   
Sbjct: 260 TACELLEGLSNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACA 319

Query: 323 PFGHLHLTNCIHSFC---LKSGIVSNSSVL-TALSTVYSRLNEMEAARKLFDESS-EKSL 377
             G + +   IH +    LK  +V+N+S L T+L  +Y++  +++AA ++ D S+  +SL
Sbjct: 320 HLGAIDIGRWIHVYIDKKLKGVVVTNASSLRTSLIDMYAKCGDIDAAPQVSDSSAFNRSL 379

Query: 378 ASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWV-HE 436
           ++WNAMI G+  +G    A  +F  M+ + + P+ +T   +LSAC+  G + LG+ +   
Sbjct: 380 STWNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRNIFRS 439

Query: 437 LVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSE-VTWNTMISGYGLHGHGL 495
           + +  N    +     +ID+    G   EA E+ + M  + + V W +++    +HG+ L
Sbjct: 440 MRQDYNITPKLEHYGCMIDLLGHSGLFKEAEEMINTMPMEPDGVIWCSLLKACKIHGN-L 498

Query: 496 EALQLFSEML--HSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFK 546
           E  + F++ L       P     LS +YA   AG   E  +I +++++D G K
Sbjct: 499 ELGESFAKKLIKIEPENPGSYVLLSNIYAT--AGKWNEVXKI-RTLLNDKGMK 548



 Score = 49.3 bits (116), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 51/213 (23%), Positives = 90/213 (42%), Gaps = 11/213 (5%)

Query: 27  QTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNE 86
           Q H+ I  HGF ++L  V  L    S       A  L   +   D+  +N +I G+++  
Sbjct: 228 QVHSWINDHGFGSNLKIVNALIDLYSKCGEVETACELLEGLSNKDVISWNTLIGGYTHMN 287

Query: 87  MPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGH------AIVSGYG 140
           + K ++  +  + + +  TP++ T   +L A +      IG  +H +       +V    
Sbjct: 288 LYKEALLLFQEMLR-SGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKKLKGVVVTNA 346

Query: 141 SDLFVGAALVDLYFKFSWVKSARKVFDKMP-EKDTVLWNSMISGLMKNCCFQDSIWVFGD 199
           S L    +L+D+Y K   + +A +V D     +    WN+MI G   +     +  +F  
Sbjct: 347 SSL--RTSLIDMYAKCGDIDAAPQVSDSSAFNRSLSTWNAMIFGFAMHGRANAAFDIFSR 404

Query: 200 MVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEI 232
           M +N G   D  +   +L A +    L LG  I
Sbjct: 405 MRKN-GIEPDDITFVGLLSACSHSGMLDLGRNI 436


>gi|356529924|ref|XP_003533536.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39680-like [Glycine max]
          Length = 694

 Score =  431 bits (1108), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 230/641 (35%), Positives = 366/641 (57%), Gaps = 5/641 (0%)

Query: 148 ALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTW 207
           +LV LY K   +  AR +FD MP ++ V WN +++G +      + + +F +MV      
Sbjct: 55  SLVHLYVKCGQLGLARNLFDAMPLRNVVSWNVLMAGYLHGGNHLEVLVLFKNMVSLQNAC 114

Query: 208 LDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELL 267
            +       L A +    ++ GM+   L  K G   H YV + LV  YS+C  VE A L 
Sbjct: 115 PNEYVFTTALSACSHGGRVKEGMQCHGLLFKFGLVCHQYVKSALVHMYSRCSHVELA-LQ 173

Query: 268 FRDIVR----PDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYP 323
             D V      D+ S N++++    +G+ E ++ + R+++      +  T VG++ +   
Sbjct: 174 VLDTVPGEHVNDIFSYNSVLNALVESGRGEEAVEVLRRMVDECVAWDHVTYVGVMGLCAQ 233

Query: 324 FGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAM 383
              L L   +H+  L+ G++ +  V + L  +Y +  E+  AR +FD    +++  W A+
Sbjct: 234 IRDLQLGLRVHARLLRGGLMFDEFVGSMLIDMYGKCGEVLNARNVFDGLQNRNVVVWTAL 293

Query: 384 IAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNF 443
           +  Y QNG  EE+++LF  M      PN  T + +L+ACA + A+  G  +H  V+   F
Sbjct: 294 MTAYLQNGYFEESLNLFTCMDREGTLPNEYTFAVLLNACAGIAALRHGDLLHARVEKLGF 353

Query: 444 ESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSE 503
           ++++ V  ALI+MY+K G+I  +  +F  M ++  +TWN MI GY  HG G +ALQ+F +
Sbjct: 354 KNHVIVRNALINMYSKSGSIDSSYNVFTDMIYRDIITWNAMICGYSHHGLGKQALQVFQD 413

Query: 504 MLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAG 563
           M+ +   P+ VTF+ VL A SH GLV+EG      ++ +   +P  EHY CMV +L RAG
Sbjct: 414 MVSAEECPNYVTFIGVLSAYSHLGLVKEGFYYLNHLMRNFKIEPGLEHYTCMVALLSRAG 473

Query: 564 QLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSN 623
            L++A  F+K   V+     W  LL AC +H++ +L R  +E + ++DP +VG + LLSN
Sbjct: 474 LLDEAENFMKTTQVKWDVVAWRTLLNACHVHRNYDLGRRIAESVLQMDPHDVGTYTLLSN 533

Query: 624 IYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEK 683
           +Y+  R +    T+R+++++R + K PG + +++    HVF S    HP+S  IY  +++
Sbjct: 534 MYAKARRWDGVVTIRKLMRERNIKKEPGASWLDIRNDIHVFLSEGSNHPESIQIYKKVQQ 593

Query: 684 LNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRV 743
           L   ++  G+     + LHDVE+E+KE  +  HSEKLA+A+GL+       IRIIKNLR+
Sbjct: 594 LLALIKPLGYVPNIASVLHDVEDEQKEGYLSYHSEKLALAYGLMKIPSPAPIRIIKNLRM 653

Query: 744 CLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           C DCHTA K ISKVT R+I+VRDANRFHHF+ G C+C D+W
Sbjct: 654 CDDCHTAVKLISKVTNRLIIVRDANRFHHFRDGSCTCLDHW 694



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 124/503 (24%), Positives = 241/503 (47%), Gaps = 10/503 (1%)

Query: 29  HAQIIIHGFQND---LSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNN 85
           HAQ +I    ++   +S +  L H          AR LF ++P  ++  +NV++ G+ + 
Sbjct: 35  HAQFLIRNQTSNHSHISHLNSLVHLYVKCGQLGLARNLFDAMPLRNVVSWNVLMAGYLHG 94

Query: 86  EMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFV 145
                 +  + ++       P+ + ++  LSA S       G+  HG     G     +V
Sbjct: 95  GNHLEVLVLFKNMVSLQNACPNEYVFTTALSACSHGGRVKEGMQCHGLLFKFGLVCHQYV 154

Query: 146 GAALVDLYFKFSWVKSARKVFDKMPEK---DTVLWNSMISGLMKNCCFQDSIWVFGDMVR 202
            +ALV +Y + S V+ A +V D +P +   D   +NS+++ L+++   ++++ V   MV 
Sbjct: 155 KSALVHMYSRCSHVELALQVLDTVPGEHVNDIFSYNSVLNALVESGRGEEAVEVLRRMVD 214

Query: 203 NGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVE 262
               W D  +   V+   A++++L+LG+ +    L+ G     +V + L+  Y KCGEV 
Sbjct: 215 ECVAW-DHVTYVGVMGLCAQIRDLQLGLRVHARLLRGGLMFDEFVGSMLIDMYGKCGEVL 273

Query: 263 RAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFY 322
            A  +F  +   +++   A+++ Y  NG  E SL LF  +       N  T   L+    
Sbjct: 274 NARNVFDGLQNRNVVVWTALMTAYLQNGYFEESLNLFTCMDREGTLPNEYTFAVLLNACA 333

Query: 323 PFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNA 382
               L   + +H+   K G  ++  V  AL  +YS+   ++++  +F +   + + +WNA
Sbjct: 334 GIAALRHGDLLHARVEKLGFKNHVIVRNALINMYSKSGSIDSSYNVFTDMIYRDIITWNA 393

Query: 383 MIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLG-KWVHELVKSR 441
           MI GY+ +GL ++A+ +FQ+M +++  PN VT   +LSA + LG +  G  +++ L+++ 
Sbjct: 394 MICGYSHHGLGKQALQVFQDMVSAEECPNYVTFIGVLSAYSHLGLVKEGFYYLNHLMRNF 453

Query: 442 NFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVT-WNTMISGYGLHGHGLEALQL 500
             E  +   T ++ + ++ G + EA         K +V  W T+++   +H +     ++
Sbjct: 454 KIEPGLEHYTCMVALLSRAGLLDEAENFMKTTQVKWDVVAWRTLLNACHVHRNYDLGRRI 513

Query: 501 FSEMLHSGIRPSGV-TFLSVLYA 522
              +L       G  T LS +YA
Sbjct: 514 AESVLQMDPHDVGTYTLLSNMYA 536



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 91/351 (25%), Positives = 168/351 (47%), Gaps = 6/351 (1%)

Query: 242 HDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQ 301
           H H+  L  LV  Y KCG++  A  LF  +   +++S N +++GY   G     L LF+ 
Sbjct: 47  HSHISHLNSLVHLYVKCGQLGLARNLFDAMPLRNVVSWNVLMAGYLHGGNHLEVLVLFKN 106

Query: 302 LLASAERV-NSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLN 360
           +++      N       +      G +      H    K G+V +  V +AL  +YSR +
Sbjct: 107 MVSLQNACPNEYVFTTALSACSHGGRVKEGMQCHGLLFKFGLVCHQYVKSALVHMYSRCS 166

Query: 361 EMEAARKLFDE---SSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSS 417
            +E A ++ D         + S+N+++    ++G  EEA+ + + M    VA + VT   
Sbjct: 167 HVELALQVLDTVPGEHVNDIFSYNSVLNALVESGRGEEAVEVLRRMVDECVAWDHVTYVG 226

Query: 418 ILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKS 477
           ++  CAQ+  + LG  VH  +       + +V + LIDMY KCG ++ AR +FD + +++
Sbjct: 227 VMGLCAQIRDLQLGLRVHARLLRGGLMFDEFVGSMLIDMYGKCGEVLNARNVFDGLQNRN 286

Query: 478 EVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQ 537
            V W  +++ Y  +G+  E+L LF+ M   G  P+  TF  +L AC+    +R GD +  
Sbjct: 287 VVVWTALMTAYLQNGYFEESLNLFTCMDREGTLPNEYTFAVLLNACAGIAALRHGD-LLH 345

Query: 538 SMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALL 588
           + +   GFK        ++++  ++G ++ +      + +      W A++
Sbjct: 346 ARVEKLGFKNHVIVRNALINMYSKSGSIDSSYNVFTDM-IYRDIITWNAMI 395



 Score = 96.3 bits (238), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 72/265 (27%), Positives = 128/265 (48%), Gaps = 34/265 (12%)

Query: 344 SNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEM 403
           S+ S L +L  +Y +  ++  AR LFD    +++ SWN ++AGY   G   E + LF+ M
Sbjct: 48  SHISHLNSLVHLYVKCGQLGLARNLFDAMPLRNVVSWNVLMAGYLHGGNHLEVLVLFKNM 107

Query: 404 QASKVA-PNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGN 462
            + + A PN    ++ LSAC+  G +  G   H L+       + YV +AL+ MY++C +
Sbjct: 108 VSLQNACPNEYVFTTALSACSHGGRVKEGMQCHGLLFKFGLVCHQYVKSALVHMYSRCSH 167

Query: 463 IVEARELFDLM--SHKSEV-TWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSV 519
           +  A ++ D +   H +++ ++N++++     G G EA+++   M+   +    VT++ V
Sbjct: 168 VELALQVLDTVPGEHVNDIFSYNSVLNALVESGRGEEAVEVLRRMVDECVAWDHVTYVGV 227

Query: 520 LYACS-----------HAGLVREG---DEIFQSMIHDHGFKPLAEHYACMVDILGRAGQL 565
           +  C+           HA L+R G   DE   SM               ++D+ G+ G++
Sbjct: 228 MGLCAQIRDLQLGLRVHARLLRGGLMFDEFVGSM---------------LIDMYGKCGEV 272

Query: 566 EKALEFIKGLAVEPGPAVWGALLGA 590
             A     GL       VW AL+ A
Sbjct: 273 LNARNVFDGLQ-NRNVVVWTALMTA 296



 Score = 75.9 bits (185), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 57/184 (30%), Positives = 89/184 (48%), Gaps = 12/184 (6%)

Query: 406 SKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESN---IYVSTALIDMYAKCGN 462
           S+  P+   +  +L  CA +  +  GK +H     RN  SN   I    +L+ +Y KCG 
Sbjct: 6   SRYLPSLEELGKLLKLCADVKWLPFGKAMHAQFLIRNQTSNHSHISHLNSLVHLYVKCGQ 65

Query: 463 IVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLH-SGIRPSGVTFLSVLY 521
           +  AR LFD M  ++ V+WN +++GY   G+ LE L LF  M+      P+   F + L 
Sbjct: 66  LGLARNLFDAMPLRNVVSWNVLMAGYLHGGNHLEVLVLFKNMVSLQNACPNEYVFTTALS 125

Query: 522 ACSHAGLVREGDEIFQSMIHDHGFKPLAEHY--ACMVDILGRAGQLEKALEFIKGLAVEP 579
           ACSH G V+EG +    +     F  +   Y  + +V +  R   +E AL+ +  +   P
Sbjct: 126 ACSHGGRVKEGMQCHGLLF---KFGLVCHQYVKSALVHMYSRCSHVELALQVLDTV---P 179

Query: 580 GPAV 583
           G  V
Sbjct: 180 GEHV 183


>gi|357132450|ref|XP_003567843.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
           chloroplastic-like [Brachypodium distachyon]
          Length = 868

 Score =  431 bits (1108), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 255/731 (34%), Positives = 391/731 (53%), Gaps = 4/731 (0%)

Query: 51  LSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFT 110
           L  F  T +A  +F  +P+ D+F +NV++ G+      + ++  Y H        PD +T
Sbjct: 139 LVRFGETWHAWKVFAKMPERDVFSWNVMVGGYGKAGFLEEALDLY-HRMLWAGARPDVYT 197

Query: 111 YSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMP 170
           +  VL +     D ++G  +H H +  G G ++ V  ALV +Y K   V++ARKVFD M 
Sbjct: 198 FPCVLRSCGGVPDLTMGREVHAHVLRFGLGVEVDVLNALVTMYAKCGDVEAARKVFDGMS 257

Query: 171 EKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGM 230
             D + WN+MI+G  +N   +  + +F  M+ +     +  ++ +V  A   + +L    
Sbjct: 258 LTDCISWNAMIAGHFENHECEAGLELFLHMLEDE-VEPNLMTITSVTVASGLLSDLDFAK 316

Query: 231 EIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNG 290
           EI  L +K GF   V     L+  YS  G +  A  +F  +   D +S  AMISGY  NG
Sbjct: 317 EIHALAVKRGFATDVAFCNSLIQMYSSLGRMGEACTVFSRMETRDAMSWTAMISGYEKNG 376

Query: 291 KTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLT 350
             + +L ++  +  +    +  T+   +      G L +   +H      G +    V  
Sbjct: 377 FPDKALEVYALMEVNNVSPDDVTVASALAACASLGRLDVGIKLHELATSKGFIRYIVVAN 436

Query: 351 ALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAP 410
           AL  +Y++   +E A ++F    +K + SW++MIAG+  N    EA+  F+ M A  V P
Sbjct: 437 ALVEMYAKSKIIEKAIEVFKYMPDKDVISWSSMIAGFCFNHKNFEALYYFRHMLAD-VKP 495

Query: 411 NPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELF 470
           N VT  + L+ACA  G++  GK +H  V  +   S  YV  AL+D+Y KCG    A   F
Sbjct: 496 NSVTFIAALAACAATGSLRCGKEIHAHVLRQGIASEGYVPNALLDLYVKCGQTGYAWAQF 555

Query: 471 DLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVR 530
                K  V+WN M++G+  HGHG  AL  F+EML +G  P  VTF+++L  CS AG+V 
Sbjct: 556 GAHGTKDVVSWNIMLAGFVAHGHGDIALSFFNEMLETGEHPDEVTFVALLCGCSRAGMVS 615

Query: 531 EGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGA 590
           +G E+F SM   +   P  +HYACMVD+L R G+L +   FI  + + P  AVWGALL  
Sbjct: 616 QGWELFHSMTEKYSIVPNLKHYACMVDLLSRVGRLTEGYNFINRMPITPDAAVWGALLNG 675

Query: 591 CMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAP 650
           C IH++  L  +A++ + EL+P + GYHVLLS++Y+    + + + VR+ ++ + L    
Sbjct: 676 CRIHRNIELGELAAKIVLELEPNDAGYHVLLSDLYADAGMWAEVSKVRKTMRVKGLEHDY 735

Query: 651 GCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKE 710
           GC+ +EV G  H F + D+ HPQ   I  +L+ +  +M+ +GF      +L D +E  K+
Sbjct: 736 GCSWVEVKGAIHAFLTDDESHPQIKEINDVLDGIYERMKASGFAPVESYSLED-KEVSKD 794

Query: 711 LMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRF 770
            ++  HSE+LA+AFGLI T PGT I + KN   C  CH   + ISK+  R I VRD   F
Sbjct: 795 DVLCGHSERLAVAFGLINTTPGTSICVTKNQYTCESCHGILRMISKIVRREITVRDTKEF 854

Query: 771 HHFKGGVCSCG 781
           HHF+ G CSCG
Sbjct: 855 HHFRDGSCSCG 865



 Score =  213 bits (542), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 146/437 (33%), Positives = 230/437 (52%), Gaps = 11/437 (2%)

Query: 132 GHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQ 191
           GHA  +     L +G A++ +  +F     A KVF KMPE+D   WN M+ G  K    +
Sbjct: 118 GHADAAHGTFGLRLGNAMLSMLVRFGETWHAWKVFAKMPERDVFSWNVMVGGYGKAGFLE 177

Query: 192 DSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGL 251
           +++ ++  M+  G    D  +   VL +   V +L +G E+    L+ G    V VL  L
Sbjct: 178 EALDLYHRMLWAGAR-PDVYTFPCVLRSCGGVPDLTMGREVHAHVLRFGLGVEVDVLNAL 236

Query: 252 VSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNS 311
           V+ Y+KCG+VE A  +F  +   D IS NAMI+G+  N + E+ L LF  +L      N 
Sbjct: 237 VTMYAKCGDVEAARKVFDGMSLTDCISWNAMIAGHFENHECEAGLELFLHMLEDEVEPNL 296

Query: 312 STIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDE 371
            TI  +         L     IH+  +K G  ++ +   +L  +YS L  M  A  +F  
Sbjct: 297 MTITSVTVASGLLSDLDFAKEIHALAVKRGFATDVAFCNSLIQMYSSLGRMGEACTVFSR 356

Query: 372 SSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLG 431
              +   SW AMI+GY +NG  ++A+ ++  M+ + V+P+ VTV+S L+ACA LG + +G
Sbjct: 357 METRDAMSWTAMISGYEKNGFPDKALEVYALMEVNNVSPDDVTVASALAACASLGRLDVG 416

Query: 432 KWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLH 491
             +HEL  S+ F   I V+ AL++MYAK   I +A E+F  M  K  ++W++MI+G+  +
Sbjct: 417 IKLHELATSKGFIRYIVVANALVEMYAKSKIIEKAIEVFKYMPDKDVISWSSMIAGFCFN 476

Query: 492 GHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEI----FQSMIHDHGFKP 547
               EAL  F  ML + ++P+ VTF++ L AC+  G +R G EI     +  I   G+ P
Sbjct: 477 HKNFEALYYFRHML-ADVKPNSVTFIAALAACAATGSLRCGKEIHAHVLRQGIASEGYVP 535

Query: 548 LAEHYACMVDILGRAGQ 564
            A     ++D+  + GQ
Sbjct: 536 NA-----LLDLYVKCGQ 547



 Score =  112 bits (279), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 110/455 (24%), Positives = 188/455 (41%), Gaps = 47/455 (10%)

Query: 27  QTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNE 86
           + HA  +  GF  D++    L    S       A  +F  +   D   +  +I G+  N 
Sbjct: 317 EIHALAVKRGFATDVAFCNSLIQMYSSLGRMGEACTVFSRMETRDAMSWTAMISGYEKNG 376

Query: 87  MPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVG 146
            P  ++  Y  +  N  ++PD+ T +  L+A ++     +G+ LH  A   G+   + V 
Sbjct: 377 FPDKALEVYALMEVNN-VSPDDVTVASALAACASLGRLDVGIKLHELATSKGFIRYIVVA 435

Query: 147 AALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGT 206
            ALV++Y K   ++ A +VF  MP+KD + W+SMI+G   N    ++++ F  M+ +   
Sbjct: 436 NALVEMYAKSKIIEKAIEVFKYMPDKDVISWSSMIAGFCFNHKNFEALYYFRHMLADVKP 495

Query: 207 WLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAEL 266
             +S +  A L A A    LR G EI    L+ G     YV   L+  Y KCG+   A  
Sbjct: 496 --NSVTFIAALAACAATGSLRCGKEIHAHVLRQGIASEGYVPNALLDLYVKCGQTGYAWA 553

Query: 267 LFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGH 326
            F      D++S N M++G+  +G  + +L  F ++L + E  +  T V L+        
Sbjct: 554 QFGAHGTKDVVSWNIMLAGFVAHGHGDIALSFFNEMLETGEHPDEVTFVALL-------- 605

Query: 327 LHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEK-----SLASWN 381
                     C ++G+VS                      +LF   +EK     +L  + 
Sbjct: 606 --------CGCSRAGMVSQ-------------------GWELFHSMTEKYSIVPNLKHYA 638

Query: 382 AMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSR 441
            M+   ++ G   E  +    M    + P+     ++L+ C     I LG+   ++V   
Sbjct: 639 CMVDLLSRVGRLTEGYNFINRM---PITPDAAVWGALLNGCRIHRNIELGELAAKIVLEL 695

Query: 442 NFESNIYVSTALIDMYAKCGNIVEARELFDLMSHK 476
                 Y    L D+YA  G   E  ++   M  K
Sbjct: 696 EPNDAGY-HVLLSDLYADAGMWAEVSKVRKTMRVK 729



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/131 (26%), Positives = 61/131 (46%), Gaps = 1/131 (0%)

Query: 447 IYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLH 506
           + +  A++ M  + G    A ++F  M  +   +WN M+ GYG  G   EAL L+  ML 
Sbjct: 129 LRLGNAMLSMLVRFGETWHAWKVFAKMPERDVFSWNVMVGGYGKAGFLEEALDLYHRMLW 188

Query: 507 SGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLE 566
           +G RP   TF  VL +C     +  G E+   ++   G     +    +V +  + G +E
Sbjct: 189 AGARPDVYTFPCVLRSCGGVPDLTMGREVHAHVLR-FGLGVEVDVLNALVTMYAKCGDVE 247

Query: 567 KALEFIKGLAV 577
            A +   G+++
Sbjct: 248 AARKVFDGMSL 258


>gi|326515658|dbj|BAK07075.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 796

 Score =  431 bits (1108), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 242/738 (32%), Positives = 391/738 (52%), Gaps = 18/738 (2%)

Query: 59  YARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAA 118
           +AR L   +P+ +   FN++I  +S    P++S+  +   R++  +  D FTY+  L+A 
Sbjct: 65  HARRLLDEMPRTNAVSFNLLIDAYSRAGQPEASLETFARARRSAGVRADRFTYAAALAAC 124

Query: 119 SACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWN 178
           S       G  +H  +++ G    +FV  +LV +Y +   +  AR+VFD   E+D V WN
Sbjct: 125 SRAGRLREGKAVHALSVLEGIAGGVFVSNSLVSMYARCGDMGQARQVFDAADERDDVSWN 184

Query: 179 SMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQE--LRLGMEIQCLG 236
           +++SG ++     D + VF  M+R  G  L+S ++ +V+   A   +  + +   +    
Sbjct: 185 ALVSGYVRAGAQDDMLRVFA-MMRRSGIGLNSFALGSVIKCCAGSDDPVMDIAAAVHGCV 243

Query: 237 LKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSL 296
           +K GF   V++ + +V  Y+K G +  A  LF+ ++ P+++  NAMI+G  C  +     
Sbjct: 244 VKAGFDSDVFLASAMVGMYAKKGALSEAVALFKSVLDPNVVVFNAMIAGL-CRDEAAVGT 302

Query: 297 RLFRQLLASAERVNSSTIVGLIPVFYPF----------GHLHLTNCIHSFCLKSGIVSNS 346
            + R+ L+    V S    G+ P  + F          G +     IH   LK     + 
Sbjct: 303 DVLREALSLYSEVQSR---GMEPTEFTFSSVIRACNLAGDIEFGKQIHGQVLKHCFQGDD 359

Query: 347 SVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQAS 406
            + +AL  +Y     ME   + F    ++ + +W AMI+G  QN L E A++LF E+  +
Sbjct: 360 FIGSALIDLYLNSGCMEDGFRCFTSVPKQDVVTWTAMISGCVQNELFERALTLFHELLGA 419

Query: 407 KVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEA 466
            + P+P T+SS+++ACA L     G+ +        F     +  + I MYA+ G++  A
Sbjct: 420 GLKPDPFTISSVMNACASLAVARTGEQIQCFATKSGFGRFTAMGNSCIHMYARSGDVHAA 479

Query: 467 RELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHA 526
              F  M     V+W+ +IS +  HG   +AL+ F+EM+ + + P+ +TFL VL ACSH 
Sbjct: 480 VRRFQEMESHDIVSWSAVISSHAQHGCARDALRFFNEMVDAKVVPNEITFLGVLTACSHG 539

Query: 527 GLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGA 586
           GLV EG + +++M  ++   P  +H  C+VD+LGRAG+L  A  FI+       P +W +
Sbjct: 540 GLVDEGLKYYETMKEEYALSPTIKHCTCVVDLLGRAGRLADAEAFIRDSIFHDEPVIWRS 599

Query: 587 LLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKL 646
           LL +C IH+D    ++ ++++ EL P +   +V L NIY    +   A+ +R V+K+R +
Sbjct: 600 LLASCRIHRDMERGQLVADRIMELQPSSSASYVNLYNIYLDAGELSLASKIRDVMKERGV 659

Query: 647 AKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEE 706
            K PG + IE+    H F +GD+ HP+S AIY+ L ++  K+ +      + T   D   
Sbjct: 660 KKEPGLSWIELRSGVHSFVAGDKSHPESNAIYSKLAEMLSKIDKLTATDASSTKSDDTIR 719

Query: 707 EEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRD 766
            E+   M  HSEKLA+A GLI       IR++KNLRVC DCH   K ISK   R IV+RD
Sbjct: 720 NEQS-WMNWHSEKLAVALGLIHLPQSAPIRVMKNLRVCRDCHLTMKLISKSEKREIVLRD 778

Query: 767 ANRFHHFKGGVCSCGDYW 784
           A RFHHF+ G CSC DYW
Sbjct: 779 AIRFHHFRDGSCSCADYW 796



 Score =  132 bits (333), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 82/320 (25%), Positives = 158/320 (49%), Gaps = 19/320 (5%)

Query: 29  HAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNEMP 88
           H  ++  GF +D+   + +    +   A   A ALF S+  P++ +FN +I G   +E  
Sbjct: 240 HGCVVKAGFDSDVFLASAMVGMYAKKGALSEAVALFKSVLDPNVVVFNAMIAGLCRDEAA 299

Query: 89  ------KSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSD 142
                 + ++  Y+ + ++  + P  FT+S V+ A +   D   G  +HG  +   +  D
Sbjct: 300 VGTDVLREALSLYSEV-QSRGMEPTEFTFSSVIRACNLAGDIEFGKQIHGQVLKHCFQGD 358

Query: 143 LFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVR 202
            F+G+AL+DLY     ++   + F  +P++D V W +MISG ++N  F+ ++ +F +++ 
Sbjct: 359 DFIGSALIDLYLNSGCMEDGFRCFTSVPKQDVVTWTAMISGCVQNELFERALTLFHELL- 417

Query: 203 NGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVE 262
             G   D  ++++V+ A A +   R G +IQC   K GF     +    +  Y++ G+V 
Sbjct: 418 GAGLKPDPFTISSVMNACASLAVARTGEQIQCFATKSGFGRFTAMGNSCIHMYARSGDVH 477

Query: 263 RAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFY 322
            A   F+++   D++S +A+IS +  +G    +LR F +++ +    N  T +G+     
Sbjct: 478 AAVRRFQEMESHDIVSWSAVISSHAQHGCARDALRFFNEMVDAKVVPNEITFLGV----- 532

Query: 323 PFGHLHLTNCIHSFCLKSGI 342
                 LT C H   +  G+
Sbjct: 533 ------LTACSHGGLVDEGL 546



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 69/318 (21%), Positives = 137/318 (43%), Gaps = 5/318 (1%)

Query: 27  QTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNE 86
           Q H Q++ H FQ D    + L     +          F S+PK D+  +  +I G   NE
Sbjct: 345 QIHGQVLKHCFQGDDFIGSALIDLYLNSGCMEDGFRCFTSVPKQDVVTWTAMISGCVQNE 404

Query: 87  MPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVG 146
           + + ++  + H      L PD FT S V++A ++      G  +   A  SG+G    +G
Sbjct: 405 LFERALTLF-HELLGAGLKPDPFTISSVMNACASLAVARTGEQIQCFATKSGFGRFTAMG 463

Query: 147 AALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGT 206
            + + +Y +   V +A + F +M   D V W+++IS   ++ C +D++  F +MV +   
Sbjct: 464 NSCIHMYARSGDVHAAVRRFQEMESHDIVSWSAVISSHAQHGCARDALRFFNEMV-DAKV 522

Query: 207 WLDSTSVAAVLPAVAEVQELRLGME-IQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAE 265
             +  +   VL A +    +  G++  + +  +      +   T +V    + G +  AE
Sbjct: 523 VPNEITFLGVLTACSHGGLVDEGLKYYETMKEEYALSPTIKHCTCVVDLLGRAGRLADAE 582

Query: 266 LLFRD-IVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPF 324
              RD I   + +   ++++    +   E   +L    +   +  +S++ V L  ++   
Sbjct: 583 AFIRDSIFHDEPVIWRSLLASCRIHRDMERG-QLVADRIMELQPSSSASYVNLYNIYLDA 641

Query: 325 GHLHLTNCIHSFCLKSGI 342
           G L L + I     + G+
Sbjct: 642 GELSLASKIRDVMKERGV 659


>gi|79475105|ref|NP_193221.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122236284|sp|Q0WSH6.1|PP312_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g14850; AltName: Full=Protein LOVASTATIN INSENSITIVE
           1
 gi|110735893|dbj|BAE99922.1| hypothetical protein [Arabidopsis thaliana]
 gi|332658109|gb|AEE83509.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 684

 Score =  431 bits (1108), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 245/643 (38%), Positives = 356/643 (55%), Gaps = 3/643 (0%)

Query: 144 FVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRN 203
           F+   L+++Y K    +SAR V    P ++ V W S+ISGL +N  F  ++  F +M R 
Sbjct: 43  FLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRRE 102

Query: 204 GGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVER 263
           G    D T   A   AVA ++    G +I  L +K G    V+V       Y K    + 
Sbjct: 103 GVVPNDFTFPCA-FKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDD 161

Query: 264 AELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYP 323
           A  LF +I   +L + NA IS    +G+   ++  F +        NS T    +     
Sbjct: 162 ARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSD 221

Query: 324 FGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAM 383
           + HL+L   +H   L+SG  ++ SV   L   Y +  ++ ++  +F E   K+  SW ++
Sbjct: 222 WLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSL 281

Query: 384 IAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNF 443
           +A Y QN   E+A  L+   +   V  +   +SS+LSACA +  + LG+ +H        
Sbjct: 282 VAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACV 341

Query: 444 ESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSE 503
           E  I+V +AL+DMY KCG I ++ + FD M  K+ VT N++I GY   G    AL LF E
Sbjct: 342 ERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEE 401

Query: 504 MLHSGIRPSG--VTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGR 561
           M   G  P+   +TF+S+L ACS AG V  G +IF SM   +G +P AEHY+C+VD+LGR
Sbjct: 402 MAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGR 461

Query: 562 AGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLL 621
           AG +E+A EFIK + ++P  +VWGAL  AC +H    L  +A+E LF+LDP++ G HVLL
Sbjct: 462 AGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHVLL 521

Query: 622 SNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAML 681
           SN ++A   + +A TVR+ +K   + K  G + I V    H F + D+ H  +  I   L
Sbjct: 522 SNTFAAAGRWAEANTVREELKGVGIKKGAGYSWITVKNQVHAFQAKDRSHILNKEIQTTL 581

Query: 682 EKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNL 741
            KL  +M  AG++ +   +L+D+EEEEK   +  HSEKLA+AFGL++      IRI KNL
Sbjct: 582 AKLRNEMEAAGYKPDLKLSLYDLEEEEKAAEVSHHSEKLALAFGLLSLPLSVPIRITKNL 641

Query: 742 RVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           R+C DCH+  KF+S    R I+VRD NRFH FK G+CSC DYW
Sbjct: 642 RICGDCHSFFKFVSGSVKREIIVRDNNRFHRFKDGICSCKDYW 684



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 113/437 (25%), Positives = 214/437 (48%), Gaps = 6/437 (1%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           AR +    P  ++  +  +I G + N    +++  +  +R+   + P++FT+     A +
Sbjct: 61  ARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRRE-GVVPNDFTFPCAFKAVA 119

Query: 120 ACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNS 179
           +      G  +H  A+  G   D+FVG +  D+Y K      ARK+FD++PE++   WN+
Sbjct: 120 SLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNA 179

Query: 180 MISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKL 239
            IS  + +   +++I  F +  R  G   +S +  A L A ++   L LGM++  L L+ 
Sbjct: 180 FISNSVTDGRPREAIEAFIEFRRIDGH-PNSITFCAFLNACSDWLHLNLGMQLHGLVLRS 238

Query: 240 GFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLF 299
           GF   V V  GL+ FY KC ++  +E++F ++   + +S  ++++ Y  N + E +  L+
Sbjct: 239 GFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLY 298

Query: 300 RQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRL 359
            +        +   I  ++        L L   IH+  +K+ +     V +AL  +Y + 
Sbjct: 299 LRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKC 358

Query: 360 NEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNP--VTVSS 417
             +E + + FDE  EK+L + N++I GY   G  + A++LF+EM      P P  +T  S
Sbjct: 359 GCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVS 418

Query: 418 ILSACAQLGAISLGKWVHELVKSR-NFESNIYVSTALIDMYAKCGNIVEARELFDLMSHK 476
           +LSAC++ GA+  G  + + ++S    E      + ++DM  + G +  A E    M  +
Sbjct: 419 LLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQ 478

Query: 477 SEVT-WNTMISGYGLHG 492
             ++ W  + +   +HG
Sbjct: 479 PTISVWGALQNACRMHG 495



 Score =  106 bits (264), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 87/375 (23%), Positives = 169/375 (45%), Gaps = 39/375 (10%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           AR LF  IP+ +L  +N  I     +  P+ +I  +   R+     P++ T+   L+A S
Sbjct: 162 ARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDG-HPNSITFCAFLNACS 220

Query: 120 ACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNS 179
                ++G+ LHG  + SG+ +D+ V   L+D Y K   ++S+  +F +M  K+ V W S
Sbjct: 221 DWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCS 280

Query: 180 MISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTS--VAAVLPAVAEVQELRLGMEIQCLGL 237
           +++  ++N   + +  ++   +R+    ++++   +++VL A A +  L LG  I    +
Sbjct: 281 LVAAYVQNHEDEKASVLY---LRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAV 337

Query: 238 KLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLR 297
           K      ++V + LV  Y KCG +E +E  F ++   +L++ N++I GY   G+ + +L 
Sbjct: 338 KACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALA 397

Query: 298 LFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNS-SVLTALSTVY 356
           LF ++             G  P +  F  L       S C ++G V N   +  ++ + Y
Sbjct: 398 LFEEMAPRG--------CGPTPNYMTFVSL------LSACSRAGAVENGMKIFDSMRSTY 443

Query: 357 SRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVS 416
                            E     ++ ++    + G+ E A    ++M    + P      
Sbjct: 444 ---------------GIEPGAEHYSCIVDMLGRAGMVERAYEFIKKM---PIQPTISVWG 485

Query: 417 SILSACAQLGAISLG 431
           ++ +AC   G   LG
Sbjct: 486 ALQNACRMHGKPQLG 500



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 67/273 (24%), Positives = 120/273 (43%), Gaps = 4/273 (1%)

Query: 27  QTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNE 86
           Q H  ++  GF  D+S    L       K    +  +F  +   +   +  ++  +  N 
Sbjct: 230 QLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNH 289

Query: 87  MPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVG 146
             + +   Y   RK+   T D F  S VLSA +      +G  +H HA+ +     +FVG
Sbjct: 290 EDEKASVLYLRSRKDIVETSD-FMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVG 348

Query: 147 AALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNG-G 205
           +ALVD+Y K   ++ + + FD+MPEK+ V  NS+I G         ++ +F +M   G G
Sbjct: 349 SALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCG 408

Query: 206 TWLDSTSVAAVLPAVAEVQELRLGMEI-QCLGLKLGFHDHVYVLTGLVSFYSKCGEVERA 264
              +  +  ++L A +    +  GM+I   +    G        + +V    + G VERA
Sbjct: 409 PTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERA 468

Query: 265 -ELLFRDIVRPDLISCNAMISGYTCNGKTESSL 296
            E + +  ++P +    A+ +    +GK +  L
Sbjct: 469 YEFIKKMPIQPTISVWGALQNACRMHGKPQLGL 501



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/110 (30%), Positives = 57/110 (51%), Gaps = 1/110 (0%)

Query: 427 AISLGKWVH-ELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMI 485
           ++ LG+ VH  +VK+ +     +++  LI+MY+K  +   AR +  L   ++ V+W ++I
Sbjct: 21  SMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLI 80

Query: 486 SGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEI 535
           SG   +GH   AL  F EM   G+ P+  TF     A +   L   G +I
Sbjct: 81  SGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQI 130


>gi|326509777|dbj|BAJ87104.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 624

 Score =  431 bits (1107), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 204/437 (46%), Positives = 285/437 (65%), Gaps = 1/437 (0%)

Query: 349 LTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKV 408
           +TA+ T Y+ +  ++ AR+LFD    K    WNAMI GYTQ+G   EA+ LF+ M  S  
Sbjct: 188 VTAMLTCYANMGALDDARRLFDGLPRKDFICWNAMIDGYTQHGKPNEALQLFRRMLRSSA 247

Query: 409 APNPVTVSSILSACAQLGAISLGKWVHELVK-SRNFESNIYVSTALIDMYAKCGNIVEAR 467
            P+ VTV  +LSA AQLG +  GKW+H  VK SR  + N+ V+TAL+DMY KCG++ +A 
Sbjct: 248 EPDEVTVVLVLSAVAQLGTVESGKWLHSYVKNSRCVQLNVRVATALVDMYCKCGSLEDAV 307

Query: 468 ELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAG 527
            +F  + +K  V WN MI+GY +HG   +AL++F ++   G+ P+ +TF+ +L ACSH+G
Sbjct: 308 AVFHGIGNKDIVVWNAMINGYAMHGDSRKALEMFVQLRDQGLWPTDITFIGLLNACSHSG 367

Query: 528 LVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGAL 587
           LV EG   FQSM H++G  P  EHY CMVD+LGRAG +E+A   ++ L + P   +W +L
Sbjct: 368 LVEEGRSFFQSMEHEYGIDPKIEHYGCMVDLLGRAGLIEEAFHLVQSLTITPDAVMWVSL 427

Query: 588 LGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLA 647
           L AC +HK+  L +  ++ L      N G ++LLSNIY+A   + + A VR ++K   + 
Sbjct: 428 LAACRLHKNMALGQRIADFLVANGLANSGMYILLSNIYAAVGKWEEVARVRSMMKASGIQ 487

Query: 648 KAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEE 707
           K PGC+ IE+    + F +GD  HP +  IYAML+K+N  ++E G   +T   LHD++E 
Sbjct: 488 KEPGCSAIEIDRKVYEFVAGDMSHPCTDEIYAMLDKMNALVKEHGHVPQTELVLHDLDEA 547

Query: 708 EKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDA 767
            KE  + VHSEKLA+AFGLI++ PG+ I+I+KNLR C DCH   K ISK+T R IV RD 
Sbjct: 548 TKEKALAVHSEKLAVAFGLISSRPGSTIKIVKNLRACSDCHAVLKLISKITSRKIVFRDR 607

Query: 768 NRFHHFKGGVCSCGDYW 784
           NRFHHF  G C+CGDYW
Sbjct: 608 NRFHHFVDGSCTCGDYW 624



 Score =  119 bits (299), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 110/455 (24%), Positives = 189/455 (41%), Gaps = 44/455 (9%)

Query: 103 ALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSA 162
           ALT D        S  +AC        LH   +  G  SD  V   L   Y     +  +
Sbjct: 21  ALTADR-----AASLLAACSTARRASELHAAVVRKGLDSDRAVAFRLQRAYAASGRLDHS 75

Query: 163 RKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAE 222
             +  +  +  T+ + S I            + +  DM+  G     + +++A LPA   
Sbjct: 76  LTLLGRTKDPTTIFYTSAIHAHSSRGLHLPGLALLSDMLSEG-LLPTAHTLSASLPAC-- 132

Query: 223 VQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFY--------------------------- 255
            + L LG  +     KL      YV T L+S Y                           
Sbjct: 133 -RGLSLGRALHAYAFKLALSGDSYVATALLSMYARAGDAAAARALFDEMPDPHVVSVTAM 191

Query: 256 ----SKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNS 311
               +  G ++ A  LF  + R D I  NAMI GYT +GK   +L+LFR++L S+   + 
Sbjct: 192 LTCYANMGALDDARRLFDGLPRKDFICWNAMIDGYTQHGKPNEALQLFRRMLRSSAEPDE 251

Query: 312 STIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVS-NSSVLTALSTVYSRLNEMEAARKLFD 370
            T+V ++      G +     +HS+   S  V  N  V TAL  +Y +   +E A  +F 
Sbjct: 252 VTVVLVLSAVAQLGTVESGKWLHSYVKNSRCVQLNVRVATALVDMYCKCGSLEDAVAVFH 311

Query: 371 ESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISL 430
               K +  WNAMI GY  +G + +A+ +F +++   + P  +T   +L+AC+  G +  
Sbjct: 312 GIGNKDIVVWNAMINGYAMHGDSRKALEMFVQLRDQGLWPTDITFIGLLNACSHSGLVEE 371

Query: 431 GK-WVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSE-VTWNTMISGY 488
           G+ +   +      +  I     ++D+  + G I EA  L   ++   + V W ++++  
Sbjct: 372 GRSFFQSMEHEYGIDPKIEHYGCMVDLLGRAGLIEEAFHLVQSLTITPDAVMWVSLLAAC 431

Query: 489 GLHGHGLEALQLFSEMLHSGIRPSGV-TFLSVLYA 522
            LH +     ++   ++ +G+  SG+   LS +YA
Sbjct: 432 RLHKNMALGQRIADFLVANGLANSGMYILLSNIYA 466



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 117/499 (23%), Positives = 197/499 (39%), Gaps = 85/499 (17%)

Query: 14  SLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLF 73
           SLL    T  + ++ HA ++  G  +D +   +L    +      ++  L      P   
Sbjct: 29  SLLAACSTARRASELHAAVVRKGLDSDRAVAFRLQRAYAASGRLDHSLTLLGRTKDPTTI 88

Query: 74  LFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGH 133
            +   I   S+  +    +   + +  +  L P   T S  L A   C   S+G  LH +
Sbjct: 89  FYTSAIHAHSSRGLHLPGLALLSDML-SEGLLPTAHTLSASLPA---CRGLSLGRALHAY 144

Query: 134 AIVSGYGSDLFVGAALVDLYF-------------------------------KFSWVKSA 162
           A       D +V  AL+ +Y                                    +  A
Sbjct: 145 AFKLALSGDSYVATALLSMYARAGDAAAARALFDEMPDPHVVSVTAMLTCYANMGALDDA 204

Query: 163 RKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAE 222
           R++FD +P KD + WN+MI G  ++    +++ +F  M+R+     D  +V  VL AVA+
Sbjct: 205 RRLFDGLPRKDFICWNAMIDGYTQHGKPNEALQLFRRMLRSSAE-PDEVTVVLVLSAVAQ 263

Query: 223 VQELRLGMEI-------QCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPD 275
           +  +  G  +       +C+ L      +V V T LV  Y KCG +E A  +F  I   D
Sbjct: 264 LGTVESGKWLHSYVKNSRCVQL------NVRVATALVDMYCKCGSLEDAVAVFHGIGNKD 317

Query: 276 LISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHS 335
           ++  NAMI+GY  +G +  +L +F QL          T +GL           L  C HS
Sbjct: 318 IVVWNAMINGYAMHGDSRKALEMFVQLRDQGLWPTDITFIGL-----------LNACSHS 366

Query: 336 FCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEE 395
             ++ G               S    ME      +   +  +  +  M+    + GL EE
Sbjct: 367 GLVEEG--------------RSFFQSME-----HEYGIDPKIEHYGCMVDLLGRAGLIEE 407

Query: 396 AISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHE-LVKSRNFESNIYVSTALI 454
           A  L Q +    + P+ V   S+L+AC     ++LG+ + + LV +    S +Y+   L 
Sbjct: 408 AFHLVQSLT---ITPDAVMWVSLLAACRLHKNMALGQRIADFLVANGLANSGMYI--LLS 462

Query: 455 DMYAKCGNIVEARELFDLM 473
           ++YA  G   E   +  +M
Sbjct: 463 NIYAAVGKWEEVARVRSMM 481



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 79/360 (21%), Positives = 148/360 (41%), Gaps = 37/360 (10%)

Query: 57  TCYA--------RALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDN 108
           TCYA        R LF  +P+ D   +N +I G++ +  P  ++  +  + +++A  PD 
Sbjct: 193 TCYANMGALDDARRLFDGLPRKDFICWNAMIDGYTQHGKPNEALQLFRRMLRSSA-EPDE 251

Query: 109 FTYSFVLSAASACCDRSIGVLLHGHAIVSG-YGSDLFVGAALVDLYFKFSWVKSARKVFD 167
            T   VLSA +       G  LH +   S     ++ V  ALVD+Y K   ++ A  VF 
Sbjct: 252 VTVVLVLSAVAQLGTVESGKWLHSYVKNSRCVQLNVRVATALVDMYCKCGSLEDAVAVFH 311

Query: 168 KMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELR 227
            +  KD V+WN+MI+G   +   + ++ +F  + R+ G W    +   +L A +    + 
Sbjct: 312 GIGNKDIVVWNAMINGYAMHGDSRKALEMFVQL-RDQGLWPTDITFIGLLNACSHSGLVE 370

Query: 228 LGME-IQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDI-VRPDLISCNAMISG 285
            G    Q +  + G    +     +V    + G +E A  L + + + PD +   ++++ 
Sbjct: 371 EGRSFFQSMEHEYGIDPKIEHYGCMVDLLGRAGLIEEAFHLVQSLTITPDAVMWVSLLAA 430

Query: 286 YTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSN 345
              +       R+   L+A+    NS   + L  ++   G       + S    SGI   
Sbjct: 431 CRLHKNMALGQRIADFLVANG-LANSGMYILLSNIYAAVGKWEEVARVRSMMKASGIQKE 489

Query: 346 SSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQA 405
                         + +E  RK+++             +AG   +  T+E  ++  +M A
Sbjct: 490 PGC-----------SAIEIDRKVYE------------FVAGDMSHPCTDEIYAMLDKMNA 526


>gi|225444744|ref|XP_002278128.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11290
           [Vitis vinifera]
          Length = 597

 Score =  431 bits (1107), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 224/561 (39%), Positives = 349/561 (62%), Gaps = 5/561 (0%)

Query: 110 TYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFS-WVKSARKVFDK 168
           +++++L+  S+  D S    +H   + +G G +L +   L+      +  +  ARK+FD+
Sbjct: 31  SFNYLLNCCSSLPDLS---RIHALVVTNGCGQNLLLSTKLIITACCLAPTMDYARKMFDQ 87

Query: 169 MPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRL 228
           MP++D  LWN++I G       ++++ ++ +M    G + D+ +   V+ + A +  LR 
Sbjct: 88  MPKRDVFLWNTLIRGYADAGPCEEALALYSNM-HGAGLFPDNYTFPFVVRSCAVLSALRE 146

Query: 229 GMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTC 288
           G E+ C  +K GF   V+V + LV+ YS+ GE    EL+F ++V  +++S  A+I+GY  
Sbjct: 147 GKEVHCNIVKHGFDSDVFVQSSLVAMYSQSGETLGMELVFGEMVVRNIVSWTAVIAGYVQ 206

Query: 289 NGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSV 348
           N   +  L +FR+++ S  + N+ T+V ++P       L+L   IH + +K G+  + S+
Sbjct: 207 NRYFKEGLGVFREMVGSGTQPNAVTLVSVLPACAGLEFLNLGKLIHGYGIKLGVDPDVSL 266

Query: 349 LTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKV 408
             AL  +Y +   +E AR LFD    ++L SWNAMIA Y QN     A+ LF+ MQA KV
Sbjct: 267 TNALIALYGKCGNVETARSLFDGMVVQNLVSWNAMIAAYEQNNAGANAVKLFRRMQAEKV 326

Query: 409 APNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARE 468
             + +T+ S++SACA LGA++ G+W+HELVK +  E N+ ++ ALIDMYAKCGNI  ARE
Sbjct: 327 DFDYITMVSVISACASLGALNTGRWMHELVKRKGLEINVSITNALIDMYAKCGNIDLARE 386

Query: 469 LFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGL 528
           +F+ +  +S V+W +MI     HGHG +AL+LFS M   G++P+  TF +V  AC H+GL
Sbjct: 387 VFERLPCRSVVSWTSMIGACASHGHGEDALKLFSRMKDEGVKPNSFTFAAVFTACRHSGL 446

Query: 529 VREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALL 588
           V EG + F+SM+ D+   P  EH ACMVD+LGRAG L +A EFI  + VEP  +VWGALL
Sbjct: 447 VEEGRKHFESMMRDYSIMPGVEHCACMVDLLGRAGSLMEAYEFIDKMPVEPDVSVWGALL 506

Query: 589 GACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAK 648
           G+C IH +  LA + +EKLF LDP+ V ++VL+SNIY+    +  AA +R+++++R+L K
Sbjct: 507 GSCRIHSNLELAELVAEKLFLLDPQTVTFYVLMSNIYAEAGRWEDAARLRKLMEERELKK 566

Query: 649 APGCTLIEVGGTPHVFTSGDQ 669
            PG +L+EV    H F SG +
Sbjct: 567 IPGHSLVEVNRRFHTFLSGSR 587



 Score =  239 bits (611), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 152/517 (29%), Positives = 272/517 (52%), Gaps = 10/517 (1%)

Query: 12  FLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATC-YARALFFSIPKP 70
           F  LL    +   L++ HA ++ +G   +L   TKL         T  YAR +F  +PK 
Sbjct: 32  FNYLLNCCSSLPDLSRIHALVVTNGCGQNLLLSTKLIITACCLAPTMDYARKMFDQMPKR 91

Query: 71  DLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLL 130
           D+FL+N +IRG+++    + ++  Y+++     L PDN+T+ FV+ + +       G  +
Sbjct: 92  DVFLWNTLIRGYADAGPCEEALALYSNMH-GAGLFPDNYTFPFVVRSCAVLSALREGKEV 150

Query: 131 HGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCF 190
           H + +  G+ SD+FV ++LV +Y +         VF +M  ++ V W ++I+G ++N  F
Sbjct: 151 HCNIVKHGFDSDVFVQSSLVAMYSQSGETLGMELVFGEMVVRNIVSWTAVIAGYVQNRYF 210

Query: 191 QDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTG 250
           ++ + VF +MV   GT  ++ ++ +VLPA A ++ L LG  I   G+KLG    V +   
Sbjct: 211 KEGLGVFREMV-GSGTQPNAVTLVSVLPACAGLEFLNLGKLIHGYGIKLGVDPDVSLTNA 269

Query: 251 LVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVN 310
           L++ Y KCG VE A  LF  +V  +L+S NAMI+ Y  N    ++++LFR++ A     +
Sbjct: 270 LIALYGKCGNVETARSLFDGMVVQNLVSWNAMIAAYEQNNAGANAVKLFRRMQAEKVDFD 329

Query: 311 SSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFD 370
             T+V +I      G L+    +H    + G+  N S+  AL  +Y++   ++ AR++F+
Sbjct: 330 YITMVSVISACASLGALNTGRWMHELVKRKGLEINVSITNALIDMYAKCGNIDLAREVFE 389

Query: 371 ESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISL 430
               +S+ SW +MI     +G  E+A+ LF  M+   V PN  T +++ +AC   G +  
Sbjct: 390 RLPCRSVVSWTSMIGACASHGHGEDALKLFSRMKDEGVKPNSFTFAAVFTACRHSGLVEE 449

Query: 431 G-KWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVT-WNTMISGY 488
           G K    +++  +    +     ++D+  + G+++EA E  D M  + +V+ W  ++   
Sbjct: 450 GRKHFESMMRDYSIMPGVEHCACMVDLLGRAGSLMEAYEFIDKMPVEPDVSVWGALLGSC 509

Query: 489 GLHGHGLEALQLFSEMLHSGIRPSGVTF---LSVLYA 522
            +H + LE  +L +E L   + P  VTF   +S +YA
Sbjct: 510 RIHSN-LELAELVAEKLFL-LDPQTVTFYVLMSNIYA 544


>gi|359485813|ref|XP_003633340.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Vitis vinifera]
          Length = 679

 Score =  431 bits (1107), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 238/658 (36%), Positives = 378/658 (57%), Gaps = 13/658 (1%)

Query: 130 LHGHAIVSGYGSDLFVGAALVDLYF--KFSWVKSARKVFDKMPEKDTVLWNSMISGLMKN 187
           LH  ++ +   +  FV + L+ LY   K + +  AR +FD++  +  + WN++I   ++N
Sbjct: 32  LHAFSLKTAIFNHPFVSSRLLALYSDPKINDLGYARSIFDRIQRRSLIHWNTIIKCYVEN 91

Query: 188 CCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYV 247
               D I +F ++V       D+ ++  V+   A +  ++ G +I  L LK+GF   V+V
Sbjct: 92  QFSHDGIVLFHELVHE--YLPDNFTLPCVIKGCARLGVVQEGKQIHGLALKIGFGSDVFV 149

Query: 248 LTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAE 307
              LV+ YSKCGE++ A  +F  ++  D++  N++I GY   G+ + +L+LF ++    E
Sbjct: 150 QGSLVNMYSKCGEIDCARKVFDGMIDKDVVLWNSLIDGYARCGEIDIALQLFEEM---PE 206

Query: 308 RVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARK 367
           R   S  V L+      G +     +        +VS ++++      Y +  + ++A +
Sbjct: 207 RDAFSWTV-LVDGLSKCGKVESARKLFDQMPCRNLVSWNAMING----YMKSGDFDSALE 261

Query: 368 LFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGA 427
           LF +     L +WN MIAGY  NG   +A+ +F  M      P+  T+ S+LSA + L  
Sbjct: 262 LFYQMPIWDLVTWNLMIAGYELNGQFMDAVKMFFMMLKLGSRPSHATLVSVLSAVSGLAV 321

Query: 428 ISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISG 487
           +  G+W+H  ++   FE +  + T+LI+MYAKCG I  A  +F  +  K    W  +I G
Sbjct: 322 LGKGRWIHSYMEKNGFELDGILGTSLIEMYAKCGCIESALTVFRAIQKKKVGHWTAIIVG 381

Query: 488 YGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKP 547
            G+HG    AL LF EM  +G++P+ + F+ VL AC+HAGLV +G + F  M++++  +P
Sbjct: 382 LGIHGMANHALALFLEMCKTGLKPNAIIFIGVLNACNHAGLVDDGRQYFDMMMNEYKIEP 441

Query: 548 LAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKL 607
             EHY C+VDIL RAG LE+A   I+ + + P   +W +LLG    H   ++   A++++
Sbjct: 442 TLEHYGCLVDILCRAGHLEEAKNTIENMPISPNKVIWMSLLGGSRNHGKIDIGEYAAQRV 501

Query: 608 FELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSG 667
            E+ PE +G ++LLSN+Y+A   + + + VR+++ KR   K PGC+ +E  GT H F  G
Sbjct: 502 IEVAPETIGCYILLSNMYAASGMWEKVSHVREMMYKRGFRKDPGCSSVEHKGTLHEFIVG 561

Query: 668 DQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVE-EEEKELMMKVHSEKLAIAFGL 726
           D  HPQ+  IYA + ++  K++  G   +T   L  +E E+EKE  ++ HSE+LAIAFGL
Sbjct: 562 DISHPQTKEIYAKMSEMKEKLKCVGHVPDTTQVLLCIEGEKEKEAELENHSERLAIAFGL 621

Query: 727 IATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           I  +PG  IRI+KNLRVC DCH+ TK +SK+  R I+VRD  RFHHFK G CSC DYW
Sbjct: 622 INVKPGIPIRIMKNLRVCNDCHSVTKLLSKIYSREIIVRDNCRFHHFKNGSCSCMDYW 679



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 130/481 (27%), Positives = 229/481 (47%), Gaps = 19/481 (3%)

Query: 18  GAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKAT--CYARALFFSIPKPDLFLF 75
           G     ++ Q HA  +     N     ++L    SD K     YAR++F  I +  L  +
Sbjct: 22  GLCAPQEVEQLHAFSLKTAIFNHPFVSSRLLALYSDPKINDLGYARSIFDRIQRRSLIHW 81

Query: 76  NVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAI 135
           N II+ +  N+     I  +  L       PDNFT   V+   +       G  +HG A+
Sbjct: 82  NTIIKCYVENQFSHDGIVLFHELVHE--YLPDNFTLPCVIKGCARLGVVQEGKQIHGLAL 139

Query: 136 VSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIW 195
             G+GSD+FV  +LV++Y K   +  ARKVFD M +KD VLWNS+I G  +      ++ 
Sbjct: 140 KIGFGSDVFVQGSLVNMYSKCGEIDCARKVFDGMIDKDVVLWNSLIDGYARCGEIDIALQ 199

Query: 196 VFGDMV-RNGGTWLDSTSVAAVLPAVAEVQELR-LGMEIQCLGLKLGFHDHVYVLTGLVS 253
           +F +M  R+  +W   T +   L    +V+  R L  ++ C  L             +++
Sbjct: 200 LFEEMPERDAFSW---TVLVDGLSKCGKVESARKLFDQMPCRNL--------VSWNAMIN 248

Query: 254 FYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSST 313
            Y K G+ + A  LF  +   DL++ N MI+GY  NG+   ++++F  +L    R + +T
Sbjct: 249 GYMKSGDFDSALELFYQMPIWDLVTWNLMIAGYELNGQFMDAVKMFFMMLKLGSRPSHAT 308

Query: 314 IVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESS 373
           +V ++        L     IHS+  K+G   +  + T+L  +Y++   +E+A  +F    
Sbjct: 309 LVSVLSAVSGLAVLGKGRWIHSYMEKNGFELDGILGTSLIEMYAKCGCIESALTVFRAIQ 368

Query: 374 EKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKW 433
           +K +  W A+I G   +G+   A++LF EM  + + PN +    +L+AC   G +  G+ 
Sbjct: 369 KKKVGHWTAIIVGLGIHGMANHALALFLEMCKTGLKPNAIIFIGVLNACNHAGLVDDGRQ 428

Query: 434 VHELVKSR-NFESNIYVSTALIDMYAKCGNIVEARELFDLMS-HKSEVTWNTMISGYGLH 491
             +++ +    E  +     L+D+  + G++ EA+   + M    ++V W +++ G   H
Sbjct: 429 YFDMMMNEYKIEPTLEHYGCLVDILCRAGHLEEAKNTIENMPISPNKVIWMSLLGGSRNH 488

Query: 492 G 492
           G
Sbjct: 489 G 489


>gi|115463499|ref|NP_001055349.1| Os05g0370000 [Oryza sativa Japonica Group]
 gi|54287484|gb|AAV31228.1| unknown protein [Oryza sativa Japonica Group]
 gi|113578900|dbj|BAF17263.1| Os05g0370000 [Oryza sativa Japonica Group]
          Length = 664

 Score =  431 bits (1107), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 225/582 (38%), Positives = 328/582 (56%), Gaps = 39/582 (6%)

Query: 242 HDHVYVLTGLVSFYSKCGEVERA----ELLFRDIVRPDLISCNAMISGYTCNGKTESSLR 297
           H  V   + L++ ++  G+ E A    E +  D V P++I+ N ++SG   +G+   ++ 
Sbjct: 83  HRTVVGWSALIAAHASHGDAEGAWGLLERMRSDGVEPNVITWNGLVSGLNRSGRARDAVL 142

Query: 298 LFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYS 357
              ++       +++ +   +      G + +   +H + +K+G   ++ V TAL  +Y 
Sbjct: 143 ALVRMHGEGFLPDATGVSCALSAVGDVGDVAVGEQLHGYVVKAGCRLDACVATALIDMYG 202

Query: 358 RLNEMEAARKLFDESSEKSLASWNAMIAGYT----------------------------- 388
           +    +   ++FDESS   +AS NA++AG +                             
Sbjct: 203 KCGRADEIVRVFDESSHMDVASCNALVAGLSRNAQVSEALRLFREFVGRGIELNVVSWTS 262

Query: 389 ------QNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRN 442
                 QNG   EA+ LF+EMQ+  + PN VT+  +L A A + A+  G+  H     + 
Sbjct: 263 IVACCVQNGRDLEAVDLFREMQSEGIEPNSVTIPCVLPAFANIAALMHGRSAHCFSLRKG 322

Query: 443 FESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFS 502
           F  +IYV +AL+DMYAKCG + +AR +F+ M +++ V+WN MI GY +HG    A++LF 
Sbjct: 323 FHHDIYVGSALVDMYAKCGRVRDARMIFEAMPYRNVVSWNAMIGGYAMHGEAENAVRLFR 382

Query: 503 EMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRA 562
            M  S  +P  VTF  VL ACS AG   EG   F  M H HG  P  EHYACMV +LGRA
Sbjct: 383 SMQSSKEKPDLVTFTCVLGACSQAGWTEEGRSYFNEMQHKHGISPRMEHYACMVTLLGRA 442

Query: 563 GQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLS 622
           G+L+ A + I  +  EP   +WG+LLG+C +H +  LA VA+E LF+L+PEN G +VLLS
Sbjct: 443 GKLDDAYDIINQMPFEPDGCIWGSLLGSCRVHGNVVLAEVAAENLFQLEPENAGNYVLLS 502

Query: 623 NIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLE 682
           NIY++++ +     +R ++K   L K  GC+ IE+    H+  +GD  HP   AI   L+
Sbjct: 503 NIYASKKMWDGVNRLRDMMKTVGLKKEKGCSWIEIKNKVHMLLAGDSSHPMMAAITEKLK 562

Query: 683 KLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLR 742
            L  +MR  GF   T   LHDVEE+EK+ ++ VHSEKLA+A GLI+T  GT +++IKNLR
Sbjct: 563 HLTMEMRRLGFAPSTDYVLHDVEEQEKDDILSVHSEKLAVALGLISTSHGTPLQVIKNLR 622

Query: 743 VCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           +C DCH A KFIS    R I VRD NRFHHFK G CSC DYW
Sbjct: 623 ICGDCHEAMKFISSFERREIYVRDTNRFHHFKDGKCSCADYW 664



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 103/428 (24%), Positives = 182/428 (42%), Gaps = 73/428 (17%)

Query: 138 GYGSDLFVGAALVDLYFKFSWVKSARKVFDKMP--------------------------- 170
           G   D FV ++L+  Y +F     AR V D MP                           
Sbjct: 50  GVSRDAFVASSLLHAYLRFGATADARSVLDGMPHRTVVGWSALIAAHASHGDAEGAWGLL 109

Query: 171 --------EKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAE 222
                   E + + WN ++SGL ++   +D++     M    G   D+T V+  L AV +
Sbjct: 110 ERMRSDGVEPNVITWNGLVSGLNRSGRARDAVLALVRM-HGEGFLPDATGVSCALSAVGD 168

Query: 223 VQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAM 282
           V ++ +G ++    +K G      V T L+  Y KCG  +    +F +    D+ SCNA+
Sbjct: 169 VGDVAVGEQLHGYVVKAGCRLDACVATALIDMYGKCGRADEIVRVFDESSHMDVASCNAL 228

Query: 283 ISGYTCNGKTESSLRLFRQLLASAERV--------------------------------- 309
           ++G + N +   +LRLFR+ +     +                                 
Sbjct: 229 VAGLSRNAQVSEALRLFREFVGRGIELNVVSWTSIVACCVQNGRDLEAVDLFREMQSEGI 288

Query: 310 --NSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARK 367
             NS TI  ++P F     L      H F L+ G   +  V +AL  +Y++   +  AR 
Sbjct: 289 EPNSVTIPCVLPAFANIAALMHGRSAHCFSLRKGFHHDIYVGSALVDMYAKCGRVRDARM 348

Query: 368 LFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGA 427
           +F+    +++ SWNAMI GY  +G  E A+ LF+ MQ+SK  P+ VT + +L AC+Q G 
Sbjct: 349 IFEAMPYRNVVSWNAMIGGYAMHGEAENAVRLFRSMQSSKEKPDLVTFTCVLGACSQAGW 408

Query: 428 ISLGK-WVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSE-VTWNTMI 485
              G+ + +E+         +     ++ +  + G + +A ++ + M  + +   W +++
Sbjct: 409 TEEGRSYFNEMQHKHGISPRMEHYACMVTLLGRAGKLDDAYDIINQMPFEPDGCIWGSLL 468

Query: 486 SGYGLHGH 493
               +HG+
Sbjct: 469 GSCRVHGN 476



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 120/528 (22%), Positives = 202/528 (38%), Gaps = 113/528 (21%)

Query: 6   PQSRNLFLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFF 65
           P    L  S LK           HA   + G   D    + L H    F AT  AR++  
Sbjct: 20  PPDPRLLPSALKSCSALRLARALHAAAAVAGVSRDAFVASSLLHAYLRFGATADARSVLD 79

Query: 66  SIP-----------------------------------KPDLFLFNVIIRGFSNNEMPKS 90
            +P                                   +P++  +N ++ G + +   + 
Sbjct: 80  GMPHRTVVGWSALIAAHASHGDAEGAWGLLERMRSDGVEPNVITWNGLVSGLNRSGRARD 139

Query: 91  SICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALV 150
           ++     +     L PD    S  LSA     D ++G  LHG+ + +G   D  V  AL+
Sbjct: 140 AVLALVRMHGEGFL-PDATGVSCALSAVGDVGDVAVGEQLHGYVVKAGCRLDACVATALI 198

Query: 151 DLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKN----------------------- 187
           D+Y K        +VFD+    D    N++++GL +N                       
Sbjct: 199 DMYGKCGRADEIVRVFDESSHMDVASCNALVAGLSRNAQVSEALRLFREFVGRGIELNVV 258

Query: 188 -------CCFQ-----DSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCL 235
                  CC Q     +++ +F +M ++ G   +S ++  VLPA A +  L  G    C 
Sbjct: 259 SWTSIVACCVQNGRDLEAVDLFREM-QSEGIEPNSVTIPCVLPAFANIAALMHGRSAHCF 317

Query: 236 GLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESS 295
            L+ GFH  +YV + LV  Y+KCG V  A ++F  +   +++S NAMI GY  +G+ E++
Sbjct: 318 SLRKGFHHDIYVGSALVDMYAKCGRVRDARMIFEAMPYRNVVSWNAMIGGYAMHGEAENA 377

Query: 296 LRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTV 355
           +RLFR + +S E+          P    F       C+   C ++G              
Sbjct: 378 VRLFRSMQSSKEK----------PDLVTF------TCVLGACSQAGWTEEGR-------- 413

Query: 356 YSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTV 415
            S  NEM+    +        +  +  M+    + G  ++A  +  +M      P+    
Sbjct: 414 -SYFNEMQHKHGI-----SPRMEHYACMVTLLGRAGKLDDAYDIINQM---PFEPDGCIW 464

Query: 416 SSILSAC--------AQLGAISLGKWVHELVKSRNFESNIYVSTALID 455
            S+L +C        A++ A +L +   E   +    SNIY S  + D
Sbjct: 465 GSLLGSCRVHGNVVLAEVAAENLFQLEPENAGNYVLLSNIYASKKMWD 512



 Score = 96.3 bits (238), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 66/251 (26%), Positives = 111/251 (44%), Gaps = 36/251 (14%)

Query: 341 GIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLF 400
           G+  ++ V ++L   Y R      AR + D    +++  W+A+IA +  +G  E A  L 
Sbjct: 50  GVSRDAFVASSLLHAYLRFGATADARSVLDGMPHRTVVGWSALIAAHASHGDAEGAWGLL 109

Query: 401 QEMQASKVAPNPVT-----------------------------------VSSILSACAQL 425
           + M++  V PN +T                                   VS  LSA   +
Sbjct: 110 ERMRSDGVEPNVITWNGLVSGLNRSGRARDAVLALVRMHGEGFLPDATGVSCALSAVGDV 169

Query: 426 GAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMI 485
           G +++G+ +H  V       +  V+TALIDMY KCG   E   +FD  SH    + N ++
Sbjct: 170 GDVAVGEQLHGYVVKAGCRLDACVATALIDMYGKCGRADEIVRVFDESSHMDVASCNALV 229

Query: 486 SGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGF 545
           +G   +    EAL+LF E +  GI  + V++ S++  C   G   E  ++F+ M    G 
Sbjct: 230 AGLSRNAQVSEALRLFREFVGRGIELNVVSWTSIVACCVQNGRDLEAVDLFREM-QSEGI 288

Query: 546 KPLAEHYACMV 556
           +P +    C++
Sbjct: 289 EPNSVTIPCVL 299



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 42/171 (24%), Positives = 77/171 (45%), Gaps = 5/171 (2%)

Query: 410 PNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEAREL 469
           P+P  + S L +C+ L        +H          + +V+++L+  Y + G   +AR +
Sbjct: 21  PDPRLLPSALKSCSALRLARA---LHAAAAVAGVSRDAFVASSLLHAYLRFGATADARSV 77

Query: 470 FDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLV 529
            D M H++ V W+ +I+ +  HG    A  L   M   G+ P+ +T+  ++   + +G  
Sbjct: 78  LDGMPHRTVVGWSALIAAHASHGDAEGAWGLLERMRSDGVEPNVITWNGLVSGLNRSGRA 137

Query: 530 REGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPG 580
           R+       M H  GF P A   +C +  +G  G +    E + G  V+ G
Sbjct: 138 RDAVLALVRM-HGEGFLPDATGVSCALSAVGDVGDVAVG-EQLHGYVVKAG 186


>gi|302142249|emb|CBI19452.3| unnamed protein product [Vitis vinifera]
          Length = 921

 Score =  431 bits (1107), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 251/744 (33%), Positives = 407/744 (54%), Gaps = 40/744 (5%)

Query: 71  DLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLL 130
           D+ L+N II  +  +      +  +  +     + P   TY+ V++A  +  +   G ++
Sbjct: 188 DILLWNSIIAAYIFHGCWVEVLRLFCKMVSVGVVAPTELTYASVVNACGSSGEEKYGAMV 247

Query: 131 HGHAIVSGY-GSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCC 189
           HG  I +G   ++L+   +LV  Y K   ++ A ++F+++  KD V WN+MI+   +   
Sbjct: 248 HGRIIKAGLEATNLW--NSLVTFYGKCGNLQHASQLFERISRKDVVSWNAMIAANEQRGE 305

Query: 190 FQDSIWVFGDMVR-NGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVL 248
            ++++ +F  M++       +  +  ++L AV+ +  LR G EI     +L       + 
Sbjct: 306 GENALGLFRRMLKVEPPVQPNRVTFLSLLSAVSGLSALRCGREIHAHIFRLSLEVDTSIT 365

Query: 249 TGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAER 308
             L++FYSKC EV +A  +F  ++  D+IS N+M++GY  N +      +F++++ S   
Sbjct: 366 NSLITFYSKCREVGKAREIFERLLLRDIISWNSMLAGYEQNEQQGRCFDIFKRMMLSGIE 425

Query: 309 VNSSTIV-----------GLIPVFYPFGHLHLTNCIHSFCLKS---GIVSNSSVLTALST 354
            +S ++            GLI       +      IH + L+    G VS  SV  A+  
Sbjct: 426 PDSHSLTIIFNAASRDSSGLI-------YFRRGKEIHGYILRRITPGGVS-LSVSNAILK 477

Query: 355 VYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVT 414
           +Y++ N +  A K+F     +   SWNAM+ GY++N   E+ + +F ++       + V+
Sbjct: 478 MYAKFNRIADAEKIFKGMKNRDSYSWNAMMDGYSRNAKFEDVLMIFLDILKQGFPLDHVS 537

Query: 415 VSSILSACAQLGAISLGKWVHELVKS-------RNFESNIYVSTALIDMYAKCGNIVEAR 467
           +S +L++C +L ++ LGK  H +V          + +S + ++ ALI MY+KCG+I +A 
Sbjct: 538 LSILLTSCGRLVSLQLGKQFHAVVAKLFNGQDCPHQDSLLSINNALISMYSKCGSIKDAA 597

Query: 468 ELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAG 527
           ++F  M  K   +W  MI+G   HG  +EALQLF  M   GI+P+ VTFL++L AC+H G
Sbjct: 598 QVFLKMERKDVFSWTAMITGCAHHGLAVEALQLFERMKTDGIKPNQVTFLALLMACAHGG 657

Query: 528 LVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGP------ 581
           LV+EG   F SM +D+G  P  EHYACM+D+ GR+GQ ++A   ++       P      
Sbjct: 658 LVQEGSYYFDSMYNDYGLSPSIEHYACMIDLFGRSGQFDRAKSLVEFGITLFKPYHDDIL 717

Query: 582 AVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVV 641
            +W  LLGAC   K  +L   A+ K+ EL+PE+   ++LL+N+Y++   +  A  VR+ +
Sbjct: 718 NLWKVLLGACHASKQLDLGVEAATKILELEPEDEATYILLANLYASSGLWEDAIKVRKAM 777

Query: 642 KKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTAL 701
           + + L K  GC+ I+ G   HVF +GD  HPQ   IY  L +LN   R  G+   T   L
Sbjct: 778 RDKGLRKEVGCSWIDTGNRRHVFVAGDVYHPQRKEIYEKLAQLNYSCRRMGYVPMTELVL 837

Query: 702 HDVEEEEKELMMKVHSEKLAIAFGLIATEPGTE-IRIIKNLRVCLDCHTATKFISKVTGR 760
           HDV+E EKE ++  HSEKLA++FGL+    G   IR++KNLRVC DCH+  KF S +  R
Sbjct: 838 HDVDETEKEAILGCHSEKLAVSFGLLNCGVGNGVIRVMKNLRVCEDCHSWMKFASLLEKR 897

Query: 761 VIVVRDANRFHHFKGGVCSCGDYW 784
            I++RD+ RFH F+ G CSCGDYW
Sbjct: 898 EILLRDSQRFHLFRDGSCSCGDYW 921



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 135/516 (26%), Positives = 247/516 (47%), Gaps = 16/516 (3%)

Query: 22  QSQLTQTHAQIIIHGFQNDL----STVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNV 77
            S L     +   HGF +      S  +K     S+ +    A+ LF + P  D+  ++ 
Sbjct: 32  HSHLRNKQLEFQNHGFSSQFIFRCSACSKFLVSQSEHERLKCAQQLFDNFPNRDVISWSA 91

Query: 78  IIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVS 137
           +I  +S       +   +  +     L P+ F+ + +L  + +  +  +   LHG +I +
Sbjct: 92  LIAAYSRCGNFAQAFGLFQKM-MGEGLQPNGFSLASLLKVSCSTGEIGLCRQLHGWSIRT 150

Query: 138 GYGSDLFVGAALVDLYFKFSWVKSARKVFDK--MPEKDTVLWNSMISGLMKNCCFQDSIW 195
           G+G D  + AA + +Y +   ++ A++VFD+  +   D +LWNS+I+  + + C+ + + 
Sbjct: 151 GFGLDSGIRAAWITMYSRCGVLEDAQRVFDETSLLALDILLWNSIIAAYIFHGCWVEVLR 210

Query: 196 VFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFY 255
           +F  MV  G       + A+V+ A     E + G  +    +K G  +   +   LV+FY
Sbjct: 211 LFCKMVSVGVVAPTELTYASVVNACGSSGEEKYGAMVHGRIIKAGL-EATNLWNSLVTFY 269

Query: 256 SKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERV--NSST 313
            KCG ++ A  LF  I R D++S NAMI+     G+ E++L LFR++L     V  N  T
Sbjct: 270 GKCGNLQHASQLFERISRKDVVSWNAMIAANEQRGEGENALGLFRRMLKVEPPVQPNRVT 329

Query: 314 IVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESS 373
            + L+        L     IH+   +  +  ++S+  +L T YS+  E+  AR++F+   
Sbjct: 330 FLSLLSAVSGLSALRCGREIHAHIFRLSLEVDTSITNSLITFYSKCREVGKAREIFERLL 389

Query: 374 EKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQ----LGAIS 429
            + + SWN+M+AGY QN        +F+ M  S + P+  +++ I +A ++    L    
Sbjct: 390 LRDIISWNSMLAGYEQNEQQGRCFDIFKRMMLSGIEPDSHSLTIIFNAASRDSSGLIYFR 449

Query: 430 LGKWVHELVKSRNFESNI--YVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISG 487
            GK +H  +  R     +   VS A++ MYAK   I +A ++F  M ++   +WN M+ G
Sbjct: 450 RGKEIHGYILRRITPGGVSLSVSNAILKMYAKFNRIADAEKIFKGMKNRDSYSWNAMMDG 509

Query: 488 YGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYAC 523
           Y  +    + L +F ++L  G     V+   +L +C
Sbjct: 510 YSRNAKFEDVLMIFLDILKQGFPLDHVSLSILLTSC 545



 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 102/324 (31%), Positives = 168/324 (51%), Gaps = 22/324 (6%)

Query: 238 KLGFHDH------VYVLTGLVSFYSKCGEVER---AELLFRDIVRPDLISCNAMISGYTC 288
           +L F +H      ++  +    F     E ER   A+ LF +    D+IS +A+I+ Y+ 
Sbjct: 39  QLEFQNHGFSSQFIFRCSACSKFLVSQSEHERLKCAQQLFDNFPNRDVISWSALIAAYSR 98

Query: 289 NGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSV 348
            G    +  LF++++    + N  ++  L+ V    G + L   +H + +++G   +S +
Sbjct: 99  CGNFAQAFGLFQKMMGEGLQPNGFSLASLLKVSCSTGEIGLCRQLHGWSIRTGFGLDSGI 158

Query: 349 LTALSTVYSRLNEMEAARKLFDESSEKSLAS--WNAMIAGYTQNGLTEEAISLFQEM-QA 405
             A  T+YSR   +E A+++FDE+S  +L    WN++IA Y  +G   E + LF +M   
Sbjct: 159 RAAWITMYSRCGVLEDAQRVFDETSLLALDILLWNSIIAAYIFHGCWVEVLRLFCKMVSV 218

Query: 406 SKVAPNPVTVSSILSACAQLGAISLGKWVH-ELVKSRNFESNIYVSTALIDMYAKCGNIV 464
             VAP  +T +S+++AC   G    G  VH  ++K+    +N++   +L+  Y KCGN+ 
Sbjct: 219 GVVAPTELTYASVVNACGSSGEEKYGAMVHGRIIKAGLEATNLW--NSLVTFYGKCGNLQ 276

Query: 465 EARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEML--HSGIRPSGVTFLSVLYA 522
            A +LF+ +S K  V+WN MI+     G G  AL LF  ML     ++P+ VTFLS+L A
Sbjct: 277 HASQLFERISRKDVVSWNAMIAANEQRGEGENALGLFRRMLKVEPPVQPNRVTFLSLLSA 336

Query: 523 CSHAGLVREGDEIFQSMIHDHGFK 546
            S    +R G E     IH H F+
Sbjct: 337 VSGLSALRCGRE-----IHAHIFR 355



 Score =  109 bits (272), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 76/278 (27%), Positives = 135/278 (48%), Gaps = 15/278 (5%)

Query: 322 YPFGHLHLTNCIHSF---CLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLA 378
           + F H HL N    F      S  +   S  +      S    ++ A++LFD    + + 
Sbjct: 28  FRFLHSHLRNKQLEFQNHGFSSQFIFRCSACSKFLVSQSEHERLKCAQQLFDNFPNRDVI 87

Query: 379 SWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELV 438
           SW+A+IA Y++ G   +A  LFQ+M    + PN  +++S+L      G I L + +H   
Sbjct: 88  SWSALIAAYSRCGNFAQAFGLFQKMMGEGLQPNGFSLASLLKVSCSTGEIGLCRQLHGWS 147

Query: 439 KSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSE--VTWNTMISGYGLHGHGLE 496
               F  +  +  A I MY++CG + +A+ +FD  S  +   + WN++I+ Y  HG  +E
Sbjct: 148 IRTGFGLDSGIRAAWITMYSRCGVLEDAQRVFDETSLLALDILLWNSIIAAYIFHGCWVE 207

Query: 497 ALQLFSEMLHSG-IRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEH---Y 552
            L+LF +M+  G + P+ +T+ SV+ AC  +     G+E + +M+H    K   E    +
Sbjct: 208 VLRLFCKMVSVGVVAPTELTYASVVNACGSS-----GEEKYGAMVHGRIIKAGLEATNLW 262

Query: 553 ACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGA 590
             +V   G+ G L+ A +  + ++       W A++ A
Sbjct: 263 NSLVTFYGKCGNLQHASQLFERIS-RKDVVSWNAMIAA 299


>gi|297798412|ref|XP_002867090.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312926|gb|EFH43349.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 803

 Score =  431 bits (1107), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 243/736 (33%), Positives = 411/736 (55%), Gaps = 22/736 (2%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           A  LF  + K D F++NV+I+GF++  +   ++  Y  +   + +  D+FTY FV+ + +
Sbjct: 79  ALQLFDEMNKADTFVWNVMIKGFTSCGLYFEALQLYCRM-VFSGVKADSFTYPFVIKSVT 137

Query: 120 ACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNS 179
                  G  +H   I   + SD++V  +L+ LY K      A KVF++MPE+D V WNS
Sbjct: 138 GISSLEEGKKIHAMVIKLRFVSDVYVCNSLISLYMKLGCSWDAEKVFEEMPERDIVSWNS 197

Query: 180 MISGLMKNCCFQD---SIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLG 236
           MISG +     +D   S+ +F +M++ G    D  S  + L A + V    +G E+ C  
Sbjct: 198 MISGYL---ALEDGFRSLMLFKEMLKFGFK-PDRFSTMSALGACSHVYSPNMGKELHCHA 253

Query: 237 LKLGFHD-HVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESS 295
           ++       V V+T ++  YSK GEV  AE +F+ I++ ++++ N +I  Y  N +   +
Sbjct: 254 VRSRIETGDVMVMTSILDMYSKYGEVSYAERIFKCIIQRNIVAWNVLIGCYARNSRVTDA 313

Query: 296 LRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTV 355
              F+++  S +      ++ LI +  P   +     IH + ++ G + +  + TAL  +
Sbjct: 314 FLCFQKM--SEQNGLQPDVITLINLL-PACAILEGRTIHGYAMRRGFLPHIVLDTALIDM 370

Query: 356 YSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTV 415
           Y    ++++A  +FD  +EK+L SWN++IA Y QNG    A+ LFQ++  S + P+  T+
Sbjct: 371 YGEWGQLKSAEVIFDRIAEKNLISWNSIIAAYVQNGKNYSALELFQKLWDSSLLPDSTTI 430

Query: 416 SSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSH 475
           +SIL A A+  ++S G+ +H  +    + SN  +  +L+ MYA CG++ +AR+ F+ +  
Sbjct: 431 ASILPAYAESLSLSEGRQIHAYIVKSRYGSNTIILNSLVHMYAMCGDLEDARKCFNHVLL 490

Query: 476 KSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEI 535
           K  V+WN++I  Y +HG G  ++ LFSEM+ S + P+  TF S+L ACS +G+V EG E 
Sbjct: 491 KDVVSWNSIIMAYAVHGFGRISVCLFSEMIASKVDPNKSTFASLLAACSISGMVDEGWEY 550

Query: 536 FQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHK 595
           F+SM  ++G  P  EHY  M+D++GR G    A  FI+ +   P   +WG+LL A   H 
Sbjct: 551 FESMKREYGIDPGIEHYGYMLDLIGRTGNFSSAKRFIREMPFLPTARIWGSLLNASRNHN 610

Query: 596 DTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLI 655
           D  +A  A+E++F+++ +N G +VLL N+Y+  R +     ++ +++ + +++    + +
Sbjct: 611 DITVAEFAAEQIFKMEHDNTGCYVLLLNMYAEARRWEDVNRIKLLMESKGISRTSSRSTV 670

Query: 656 EVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKV 715
           E     HV T+GD+ H ++  IY +L+ ++   R  G + E  + +H V +  +E + K 
Sbjct: 671 EAKSKTHVLTNGDRSHVETNKIYEVLDIVS---RMIGEEEEEDSYVHYVSKLRRETLAKS 727

Query: 716 -------HSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDAN 768
                  HS +LA  FGLI+TE G  + +  N R+C  CH   +  SK+T R IVV D+ 
Sbjct: 728 RSNSPRRHSVRLATCFGLISTETGRTVTVRNNTRICRKCHEFLEKASKMTRREIVVGDSK 787

Query: 769 RFHHFKGGVCSCGDYW 784
            FHHF  G CSCG+YW
Sbjct: 788 IFHHFSNGRCSCGNYW 803



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 113/383 (29%), Positives = 206/383 (53%), Gaps = 15/383 (3%)

Query: 159 VKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLP 218
           ++ A ++FD+M + DT +WN MI G      + +++ ++  MV + G   DS +   V+ 
Sbjct: 76  MEDALQLFDEMNKADTFVWNVMIKGFTSCGLYFEALQLYCRMVFS-GVKADSFTYPFVIK 134

Query: 219 AVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLIS 278
           +V  +  L  G +I  + +KL F   VYV   L+S Y K G    AE +F ++   D++S
Sbjct: 135 SVTGISSLEEGKKIHAMVIKLRFVSDVYVCNSLISLYMKLGCSWDAEKVFEEMPERDIVS 194

Query: 279 CNAMISGYTCNGKTESSLRLFRQLLA---SAERVNSSTIVGLIP-VFYPFGHLHLTNCIH 334
            N+MISGY        SL LF+++L      +R ++ + +G    V+ P    ++   +H
Sbjct: 195 WNSMISGYLALEDGFRSLMLFKEMLKFGFKPDRFSTMSALGACSHVYSP----NMGKELH 250

Query: 335 SFCLKSGI-VSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLT 393
              ++S I   +  V+T++  +YS+  E+  A ++F    ++++ +WN +I  Y +N   
Sbjct: 251 CHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFKCIIQRNIVAWNVLIGCYARNSRV 310

Query: 394 EEAISLFQEM-QASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTA 452
            +A   FQ+M + + + P+ +T+ ++L ACA L     G+ +H     R F  +I + TA
Sbjct: 311 TDAFLCFQKMSEQNGLQPDVITLINLLPACAILE----GRTIHGYAMRRGFLPHIVLDTA 366

Query: 453 LIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPS 512
           LIDMY + G +  A  +FD ++ K+ ++WN++I+ Y  +G    AL+LF ++  S + P 
Sbjct: 367 LIDMYGEWGQLKSAEVIFDRIAEKNLISWNSIIAAYVQNGKNYSALELFQKLWDSSLLPD 426

Query: 513 GVTFLSVLYACSHAGLVREGDEI 535
             T  S+L A + +  + EG +I
Sbjct: 427 STTIASILPAYAESLSLSEGRQI 449



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 97/345 (28%), Positives = 171/345 (49%), Gaps = 8/345 (2%)

Query: 248 LTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAE 307
           LT  +  ++  G +E A  LF ++ + D    N MI G+T  G    +L+L+ +++ S  
Sbjct: 63  LTRALRGFADSGLMEDALQLFDEMNKADTFVWNVMIKGFTSCGLYFEALQLYCRMVFSGV 122

Query: 308 RVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARK 367
           + +S T   +I        L     IH+  +K   VS+  V  +L ++Y +L     A K
Sbjct: 123 KADSFTYPFVIKSVTGISSLEEGKKIHAMVIKLRFVSDVYVCNSLISLYMKLGCSWDAEK 182

Query: 368 LFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGA 427
           +F+E  E+ + SWN+MI+GY        ++ LF+EM      P+  +  S L AC+ + +
Sbjct: 183 VFEEMPERDIVSWNSMISGYLALEDGFRSLMLFKEMLKFGFKPDRFSTMSALGACSHVYS 242

Query: 428 ISLGKWVH-ELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMIS 486
            ++GK +H   V+SR    ++ V T+++DMY+K G +  A  +F  +  ++ V WN +I 
Sbjct: 243 PNMGKELHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFKCIIQRNIVAWNVLIG 302

Query: 487 GYGLHGHGLEALQLFSEML-HSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGF 545
            Y  +    +A   F +M   +G++P  +T +++L AC+    + EG  I    +   GF
Sbjct: 303 CYARNSRVTDAFLCFQKMSEQNGLQPDVITLINLLPACA----ILEGRTIHGYAMR-RGF 357

Query: 546 KPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGA 590
            P       ++D+ G  GQL+ A E I     E     W +++ A
Sbjct: 358 LPHIVLDTALIDMYGEWGQLKSA-EVIFDRIAEKNLISWNSIIAA 401



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 77/279 (27%), Positives = 144/279 (51%), Gaps = 5/279 (1%)

Query: 40  DLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLR 99
           D+  +T +    S +    YA  +F  I + ++  +NV+I  ++ N     +   +  + 
Sbjct: 262 DVMVMTSILDMYSKYGEVSYAERIFKCIIQRNIVAWNVLIGCYARNSRVTDAFLCFQKMS 321

Query: 100 KNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWV 159
           +   L PD  T   +L A +    R+I    HG+A+  G+   + +  AL+D+Y ++  +
Sbjct: 322 EQNGLQPDVITLINLLPACAILEGRTI----HGYAMRRGFLPHIVLDTALIDMYGEWGQL 377

Query: 160 KSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPA 219
           KSA  +FD++ EK+ + WNS+I+  ++N     ++ +F  +  +     DST++A++LPA
Sbjct: 378 KSAEVIFDRIAEKNLISWNSIIAAYVQNGKNYSALELFQKLW-DSSLLPDSTTIASILPA 436

Query: 220 VAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISC 279
            AE   L  G +I    +K  +  +  +L  LV  Y+ CG++E A   F  ++  D++S 
Sbjct: 437 YAESLSLSEGRQIHAYIVKSRYGSNTIILNSLVHMYAMCGDLEDARKCFNHVLLKDVVSW 496

Query: 280 NAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLI 318
           N++I  Y  +G    S+ LF +++AS    N ST   L+
Sbjct: 497 NSIIMAYAVHGFGRISVCLFSEMIASKVDPNKSTFASLL 535


>gi|297838665|ref|XP_002887214.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297333055|gb|EFH63473.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 740

 Score =  430 bits (1106), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 232/674 (34%), Positives = 370/674 (54%), Gaps = 32/674 (4%)

Query: 142 DLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMV 201
           +LF    L+  Y K   +    + F+K+P++D V WN +I G   +     ++  +  M+
Sbjct: 68  NLFSWNNLLLAYSKSGHLSEMERTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMM 127

Query: 202 RNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSK---- 257
           ++  + L   ++  +L   +    + LG +I    +KLGF  ++ V + L+  YSK    
Sbjct: 128 KDFSSNLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLDMYSKVGCI 187

Query: 258 ---------------------------CGEVERAELLFRDIVRPDLISCNAMISGYTCNG 290
                                      CG +E A  LFR + + D +S +AMI G   NG
Sbjct: 188 SDAKKVFYGLDDRNTVMYNTLMGGLLACGMIEDALQLFRGMEK-DSVSWSAMIKGLAQNG 246

Query: 291 KTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLT 350
             + ++  FR++     +++      ++P     G ++    IH+  +++ +  +  V +
Sbjct: 247 MEKEAIECFREMKIEGLKMDQYPFGSVLPACGGLGAINDGRQIHACIIRTNLQDHIYVGS 306

Query: 351 ALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAP 410
           AL  +Y +   +  A+ +FD   +K++ SW AM+ GY Q G   EA+ +F +MQ S + P
Sbjct: 307 ALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAGEAVKIFLDMQRSGIDP 366

Query: 411 NPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELF 470
           +  T+   +SACA + ++  G   H    +      I VS +L+ +Y KCG+I ++  LF
Sbjct: 367 DHYTLGQAISACANISSLEEGSQFHGKAITAGLIHYITVSNSLVTLYGKCGDIDDSTRLF 426

Query: 471 DLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVR 530
           + M+ + EV+W  M+S Y   G  +EA+QLF +M+  G++P GVT   V+ ACS AGLV 
Sbjct: 427 NEMNVRDEVSWTAMVSAYAQFGRAVEAIQLFDKMVQLGLKPDGVTLTGVISACSRAGLVE 486

Query: 531 EGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGA 590
           +G   F+ MI+++G  P   HY+CM+D+  R+G++E+A+ FI G+   P    W  LL A
Sbjct: 487 KGQRYFELMINEYGIVPSNGHYSCMIDLFSRSGRIEEAMGFINGMPFRPDAIGWTTLLSA 546

Query: 591 CMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAP 650
           C    +  + + A+E L ELDP +   + LLS+IY+++  +   A +R+ +K++ + K P
Sbjct: 547 CRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDCVAQLRRGMKEKNVRKEP 606

Query: 651 GCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKE 710
           G + I+  G  H F++ D+  P S  IYA LE+L  K+ + G++ +T    HDVEE  K 
Sbjct: 607 GQSWIKWKGKLHSFSADDESSPYSDQIYAKLEELYQKIIDNGYKPDTSFVHHDVEEAVKI 666

Query: 711 LMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRF 770
            M+  HSE+LAIAFGLI    G  IR+ KNLRVC+DCH ATK IS VTGR I+VRDA RF
Sbjct: 667 KMLNCHSERLAIAFGLIFVPSGLPIRVGKNLRVCVDCHNATKHISSVTGREILVRDAVRF 726

Query: 771 HHFKGGVCSCGDYW 784
           H FK G CSCGD+W
Sbjct: 727 HRFKDGTCSCGDFW 740



 Score =  186 bits (472), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 132/543 (24%), Positives = 255/543 (46%), Gaps = 67/543 (12%)

Query: 45  TKLAHRLSDFKATCYARALFFSIPKPDLF------------------------------- 73
             + H  +  +++ YAR +F  IP+P+LF                               
Sbjct: 42  NNIVHAYALIRSSIYARRVFDGIPQPNLFSWNNLLLAYSKSGHLSEMERTFEKLPDRDGV 101

Query: 74  LFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGH 133
            +NV+I G+S + +  +++  Y  + K+ +      T   +L  +S+    S+G  +HG 
Sbjct: 102 TWNVLIEGYSLSGLVGAAVKAYNTMMKDFSSNLTRVTLMTMLKLSSSNGHVSLGKQIHGQ 161

Query: 134 AIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDS 193
            I  G+ S L VG+ L+D+Y K   +  A+KVF  + +++TV++N+++ GL+     +D+
Sbjct: 162 VIKLGFESYLLVGSPLLDMYSKVGCISDAKKVFYGLDDRNTVMYNTLMGGLLACGMIEDA 221

Query: 194 IWVFGDMVRNGGTW-----------------------------LDSTSVAAVLPAVAEVQ 224
           + +F  M ++  +W                             +D     +VLPA   + 
Sbjct: 222 LQLFRGMEKDSVSWSAMIKGLAQNGMEKEAIECFREMKIEGLKMDQYPFGSVLPACGGLG 281

Query: 225 ELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMIS 284
            +  G +I    ++    DH+YV + L+  Y KC  +  A+ +F  + + +++S  AM+ 
Sbjct: 282 AINDGRQIHACIIRTNLQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVV 341

Query: 285 GYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVS 344
           GY   G+   ++++F  +  S    +  T+   I        L   +  H   + +G++ 
Sbjct: 342 GYGQTGRAGEAVKIFLDMQRSGIDPDHYTLGQAISACANISSLEEGSQFHGKAITAGLIH 401

Query: 345 NSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQ 404
             +V  +L T+Y +  +++ + +LF+E + +   SW AM++ Y Q G   EAI LF +M 
Sbjct: 402 YITVSNSLVTLYGKCGDIDDSTRLFNEMNVRDEVSWTAMVSAYAQFGRAVEAIQLFDKMV 461

Query: 405 ASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRN--FESNIYVSTALIDMYAKCGN 462
              + P+ VT++ ++SAC++ G +  G+   EL+ +      SN + S  +ID++++ G 
Sbjct: 462 QLGLKPDGVTLTGVISACSRAGLVEKGQRYFELMINEYGIVPSNGHYS-CMIDLFSRSGR 520

Query: 463 IVEARELFDLMSHKSE-VTWNTMISGYGLHGHGLEALQLFSEML--HSGIRPSGVTFLSV 519
           I EA    + M  + + + W T++S     G+ LE  +  +E L       P+G T LS 
Sbjct: 521 IEEAMGFINGMPFRPDAIGWTTLLSACRNKGN-LEIGKWAAESLIELDPHHPAGYTLLSS 579

Query: 520 LYA 522
           +YA
Sbjct: 580 IYA 582



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 106/463 (22%), Positives = 198/463 (42%), Gaps = 70/463 (15%)

Query: 8   SRNLFLSLLKGAKTQSQLT---QTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALF 64
           +R   +++LK + +   ++   Q H Q+I  GF++ L   + L    S       A+ +F
Sbjct: 135 TRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLDMYSKVGCISDAKKVF 194

Query: 65  FSIPKPDLFLFNVI------------------------------IRGFSNNEMPKSSI-C 93
           + +   +  ++N +                              I+G + N M K +I C
Sbjct: 195 YGLDDRNTVMYNTLMGGLLACGMIEDALQLFRGMEKDSVSWSAMIKGLAQNGMEKEAIEC 254

Query: 94  FYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLY 153
           F     K   L  D + +  VL A       + G  +H   I +     ++VG+AL+D+Y
Sbjct: 255 FRE--MKIEGLKMDQYPFGSVLPACGGLGAINDGRQIHACIIRTNLQDHIYVGSALIDMY 312

Query: 154 FKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSV 213
            K   +  A+ VFD+M +K+ V W +M+ G  +     +++ +F DM R+G    D  ++
Sbjct: 313 CKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAGEAVKIFLDMQRSGID-PDHYTL 371

Query: 214 AAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVR 273
              + A A +  L  G +     +  G   ++ V   LV+ Y KCG+++ +  LF ++  
Sbjct: 372 GQAISACANISSLEEGSQFHGKAITAGLIHYITVSNSLVTLYGKCGDIDDSTRLFNEMNV 431

Query: 274 PDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCI 333
            D +S  AM+S Y   G+   +++LF +++    + +  T+ G+I               
Sbjct: 432 RDEVSWTAMVSAYAQFGRAVEAIQLFDKMVQLGLKPDGVTLTGVI--------------- 476

Query: 334 HSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLT 393
            S C ++G+V        L      +NE              S   ++ MI  ++++G  
Sbjct: 477 -SACSRAGLVEKGQRYFEL-----MINEYGIV---------PSNGHYSCMIDLFSRSGRI 521

Query: 394 EEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHE 436
           EEA+     M      P+ +  +++LSAC   G + +GKW  E
Sbjct: 522 EEAMGFINGM---PFRPDAIGWTTLLSACRNKGNLEIGKWAAE 561



 Score = 47.0 bits (110), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 49/234 (20%), Positives = 106/234 (45%), Gaps = 15/234 (6%)

Query: 444 ESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSE 503
           + N++    L+  Y+K G++ E    F+ +  +  VTWN +I GY L G    A++ ++ 
Sbjct: 66  QPNLFSWNNLLLAYSKSGHLSEMERTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNT 125

Query: 504 MLHS-GIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRA 562
           M+       + VT +++L   S  G V  G +I   +I   GF+      + ++D+  + 
Sbjct: 126 MMKDFSSNLTRVTLMTMLKLSSSNGHVSLGKQIHGQVI-KLGFESYLLVGSPLLDMYSKV 184

Query: 563 GQLEKALEFIKGLAVEPGPAVWGALLG---ACMIHKDTNLARVASEKLFE-LDPENVGYH 618
           G +  A +   GL  +    ++  L+G   AC + +D       + +LF  ++ ++V + 
Sbjct: 185 GCISDAKKVFYGLD-DRNTVMYNTLMGGLLACGMIED-------ALQLFRGMEKDSVSWS 236

Query: 619 VLLSNIYSAERDYLQAATVRQV-VKKRKLAKAPGCTLIEVGGTPHVFTSGDQLH 671
            ++  +     +       R++ ++  K+ + P  +++   G       G Q+H
Sbjct: 237 AMIKGLAQNGMEKEAIECFREMKIEGLKMDQYPFGSVLPACGGLGAINDGRQIH 290


>gi|297736155|emb|CBI24193.3| unnamed protein product [Vitis vinifera]
          Length = 1083

 Score =  430 bits (1106), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 257/765 (33%), Positives = 404/765 (52%), Gaps = 46/765 (6%)

Query: 59   YARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAA 118
            +AR +F  +   +   ++ ++ G+    + + ++  +  +     + P+ F  + +++A 
Sbjct: 326  HARYVFDEMRHRNEASWSTMLSGYVRVGLYEEAVGLFCQMW-GLGVEPNGFMVASLITA- 383

Query: 119  SACCDRS-----IGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKD 173
               C RS      G  +HG  + +G   D++VG ALV  Y     V +A+K+F++MP+ +
Sbjct: 384  ---CSRSGYMADEGFQVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHN 440

Query: 174  TVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQ 233
             V W S++ G   +    + + V+  M R  G   +  + A V  +   +++  LG ++ 
Sbjct: 441  VVSWTSLMVGYSDSGNPGEVLNVYQRM-RQEGVSGNQNTFATVTSSCGLLEDQVLGYQVL 499

Query: 234  CLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTE 293
               ++ GF D V V   L+S +S    VE A  +F  +   D+IS NAMIS Y  +G   
Sbjct: 500  GHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCR 559

Query: 294  SSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALS 353
             SLR F  +       NS+T+  L+ V     +L     IH   +K G+ SN  +   L 
Sbjct: 560  ESLRCFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLL 619

Query: 354  TVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNG--------LTE----------- 394
            T+YS     E A  +F   +E+ L SWN+M+A Y Q+G        L E           
Sbjct: 620  TLYSEAGRSEDAELVFQAMTERDLISWNSMMACYVQDGKCLDGLKILAELLQMGKPDRVT 679

Query: 395  ---------------EAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVK 439
                           EA+  ++ ++   +  N +T+ S L+A A L  +  G+ +H LV 
Sbjct: 680  WNALIGGHAENEEPNEAVKAYKLIREKGIPANYITMVS-LAATANLAVLEEGQQLHGLVI 738

Query: 440  SRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQ 499
               FES+++V+ A +DMY KCG + +  ++     ++S ++WN +IS +  HG   +A +
Sbjct: 739  KLGFESDLHVTNAAMDMYGKCGEMHDVLKMLPQPINRSRLSWNILISAFARHGCFQKARE 798

Query: 500  LFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDIL 559
             F EML  G +P  VTF+S+L AC+H GLV EG   + SM  + G  P  EH  C++D+L
Sbjct: 799  TFHEMLKLGPKPDHVTFVSLLSACNHGGLVDEGLAYYDSMTREFGVFPGIEHCVCIIDLL 858

Query: 560  GRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHV 619
            GR+G+L  A  FIK + V P    W +LL AC IH +  LAR  +E L ELDP +   +V
Sbjct: 859  GRSGRLSHAEGFIKEMPVPPNDLAWRSLLAACRIHGNLELARKTAEHLLELDPSDDSAYV 918

Query: 620  LLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYA 679
            L SN+ +    +     +R+ +    + K P C+ +++    H F  G++ HPQ++ I A
Sbjct: 919  LYSNVCATSGKWEDVENLRKEMGSNNIKKQPACSWVKLKDKVHSFGMGEKYHPQASRISA 978

Query: 680  MLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIK 739
             L +L    +EAG+  +T  ALHD++EE+KE  +  HSE+LA+AFGLI T   + +RI K
Sbjct: 979  KLGELMKMTKEAGYVPDTSFALHDMDEEQKEYNLWNHSERLALAFGLINTPESSTLRIFK 1038

Query: 740  NLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
            NLRVC DCH+  KF+S + GR IV+RD  RFHHF GG CSCGDYW
Sbjct: 1039 NLRVCGDCHSVYKFVSGIVGRKIVLRDPYRFHHFSGGKCSCGDYW 1083



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 140/528 (26%), Positives = 222/528 (42%), Gaps = 129/528 (24%)

Query: 105 TPDNFTYSFVLSAASACCDRSI---GVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKS 161
            P     S  L     C D+     G L+H H I +G+GSDL +   L+  Y K   V +
Sbjct: 24  NPTRLDPSLYLKILQLCIDKKAKKQGHLIHTHLITNGFGSDLHLNTKLIIFYVKVGDVIA 83

Query: 162 ARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVA 221
           AR VFD MPE+  V W +M+SG  +N  F+ +  +F DM   G                 
Sbjct: 84  ARNVFDGMPERSVVSWTAMVSGYSQNGRFEKAFVLFSDMRHCG----------------- 126

Query: 222 EVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNA 281
                                  V     LV F+SKCG++E A  LF  ++  D++S NA
Sbjct: 127 -----------------------VKANHALVDFHSKCGKMEDASYLFGTMMERDVVSWNA 163

Query: 282 MISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFC---- 337
           MI GY   G  + S  +FR +L      +  T+  ++      G L + N IH       
Sbjct: 164 MIGGYAVQGFADDSFCMFRSMLRGGLVPDCYTLGSVLRASAEGGGLIIANQIHGIITQLG 223

Query: 338 -------------------------------LKSGIVSNSSVLT------------ALST 354
                                          LK  + S+++++T            AL  
Sbjct: 224 YGSYDIVTGLLINAYAKNGSLRSAKDLRKGMLKKDLFSSTALITGYAHEGIYTMGNALID 283

Query: 355 VYSRLNEMEAARKLFDESSEKSL---------------------------------ASWN 381
           +Y++  E+E A++ FDE  EK++                                 ASW+
Sbjct: 284 MYAKSGEIEDAKRAFDEMEEKNVISWTSLISGYAKHGYGHMAHARYVFDEMRHRNEASWS 343

Query: 382 AMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAIS-LGKWVHELVKS 440
            M++GY + GL EEA+ LF +M    V PN   V+S+++AC++ G ++  G  VH  V  
Sbjct: 344 TMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQVHGFVVK 403

Query: 441 RNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQL 500
                ++YV TAL+  Y   G +  A++LF+ M   + V+W +++ GY   G+  E L +
Sbjct: 404 TGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNV 463

Query: 501 FSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIH--DHGFK 546
           +  M   G+  +  TF +V  +C   GL+ +    +Q + H   +GF+
Sbjct: 464 YQRMRQEGVSGNQNTFATVTSSC---GLLEDQVLGYQVLGHIIQYGFE 508



 Score =  159 bits (401), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 164/644 (25%), Positives = 284/644 (44%), Gaps = 53/644 (8%)

Query: 45  TKLAHRLSDFKATC----YARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRK 100
            K  H L DF + C     A  LF ++ + D+  +N +I G++       S C +  + +
Sbjct: 127 VKANHALVDFHSKCGKMEDASYLFGTMMERDVVSWNAMIGGYAVQGFADDSFCMFRSMLR 186

Query: 101 NTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVK 160
              L PD +T   VL A++      I   +HG     GYGS   V   L++ Y K   ++
Sbjct: 187 G-GLVPDCYTLGSVLRASAEGGGLIIANQIHGIITQLGYGSYDIVTGLLINAYAKNGSLR 245

Query: 161 SARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAV 220
           SA+ +   M +KD     ++I+G        + I+  G+ + +   +  S  +     A 
Sbjct: 246 SAKDLRKGMLKKDLFSSTALITGYA-----HEGIYTMGNALID--MYAKSGEIEDAKRAF 298

Query: 221 AEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSK--CGEVERAELLFRDIVRPDLIS 278
            E++E                  +V   T L+S Y+K   G +  A  +F ++   +  S
Sbjct: 299 DEMEE-----------------KNVISWTSLISGYAKHGYGHMAHARYVFDEMRHRNEAS 341

Query: 279 CNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNC-IHSFC 337
            + M+SGY   G  E ++ LF Q+       N   +  LI      G++      +H F 
Sbjct: 342 WSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQVHGFV 401

Query: 338 LKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAI 397
           +K+GI+ +  V TAL   Y  +  +  A+KLF+E  + ++ SW +++ GY+ +G   E +
Sbjct: 402 VKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVL 461

Query: 398 SLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMY 457
           +++Q M+   V+ N  T +++ S+C  L    LG  V   +    FE ++ V+ +LI M+
Sbjct: 462 NVYQRMRQEGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMF 521

Query: 458 AKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFL 517
           +   ++ EA  +FD M+    ++WN MIS Y  HG   E+L+ F  M H     +  T  
Sbjct: 522 SSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTTLS 581

Query: 518 SVLYACSHAGLVREGDEIFQSMIHDHGF--KPLAEHYACMVDIL----GRAGQLEKALEF 571
           S+L  CS    ++ G  I       HG   K   +   C+ + L      AG+ E A E 
Sbjct: 582 SLLSVCSSVDNLKWGRGI-------HGLVVKLGLDSNVCICNTLLTLYSEAGRSEDA-EL 633

Query: 572 IKGLAVEPGPAVWGALLGACMIHKDTNLA--RVASEKLFELDPENVGYHVLLSNIYSAER 629
           +     E     W +++ AC +     L   ++ +E L    P+ V ++ L+     AE 
Sbjct: 634 VFQAMTERDLISWNSMM-ACYVQDGKCLDGLKILAELLQMGKPDRVTWNALIGG--HAEN 690

Query: 630 DYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPH--VFTSGDQLH 671
           +    A     + + K   A   T++ +  T +  V   G QLH
Sbjct: 691 EEPNEAVKAYKLIREKGIPANYITMVSLAATANLAVLEEGQQLH 734



 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 155/631 (24%), Positives = 277/631 (43%), Gaps = 52/631 (8%)

Query: 27   QTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNE 86
            Q H  ++  G   D+   T L H          A+ LF  +P  ++  +  ++ G+S++ 
Sbjct: 396  QVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSG 455

Query: 87   MPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVG 146
             P   +  Y  +R+   ++ +  T++ V S+     D+ +G  + GH I  G+   + V 
Sbjct: 456  NPGEVLNVYQRMRQE-GVSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVA 514

Query: 147  AALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGT 206
             +L+ ++  FS V+ A  VFD M E D + WN+MIS    +   ++S+  F  M R+   
Sbjct: 515  NSLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWM-RHLHN 573

Query: 207  WLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAEL 266
              +ST+++++L   + V  L+ G  I  L +KLG   +V +   L++ YS+ G  E AEL
Sbjct: 574  ETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAEL 633

Query: 267  LFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLL--ASAERVNSSTIVG-------- 316
            +F+ +   DLIS N+M++ Y  +GK    L++  +LL     +RV  + ++G        
Sbjct: 634  VFQAMTERDLISWNSMMACYVQDGKCLDGLKILAELLQMGKPDRVTWNALIGGHAENEEP 693

Query: 317  -------------LIPVFY----------PFGHLHLTNCIHSFCLKSGIVSNSSVLTALS 353
                          IP  Y              L     +H   +K G  S+  V  A  
Sbjct: 694  NEAVKAYKLIREKGIPANYITMVSLAATANLAVLEEGQQLHGLVIKLGFESDLHVTNAAM 753

Query: 354  TVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPV 413
             +Y +  EM    K+  +   +S  SWN +I+ + ++G  ++A   F EM      P+ V
Sbjct: 754  DMYGKCGEMHDVLKMLPQPINRSRLSWNILISAFARHGCFQKARETFHEMLKLGPKPDHV 813

Query: 414  TVSSILSACAQLGAISLG-KWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDL 472
            T  S+LSAC   G +  G  +   + +       I     +ID+  + G +  A      
Sbjct: 814  TFVSLLSACNHGGLVDEGLAYYDSMTREFGVFPGIEHCVCIIDLLGRSGRLSHAEGFIKE 873

Query: 473  MS-HKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYA--CSHAGLV 529
            M    +++ W ++++   +HG+ LE  +  +E L   + PS  +   VLY+  C+ +G  
Sbjct: 874  MPVPPNDLAWRSLLAACRIHGN-LELARKTAEHLLE-LDPSDDSAY-VLYSNVCATSGKW 930

Query: 530  REGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLG 589
             + + + + M    G   + +  AC    L      +K   F  G    P  +   A LG
Sbjct: 931  EDVENLRKEM----GSNNIKKQPACSWVKLK-----DKVHSFGMGEKYHPQASRISAKLG 981

Query: 590  ACM-IHKDTNLARVASEKLFELDPENVGYHV 619
              M + K+       S  L ++D E   Y++
Sbjct: 982  ELMKMTKEAGYVPDTSFALHDMDEEQKEYNL 1012



 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 53/180 (29%), Positives = 87/180 (48%), Gaps = 10/180 (5%)

Query: 391 GLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVS 450
           G   EA+ L   + ++    +P     IL  C    A   G  +H  + +  F S+++++
Sbjct: 12  GRLAEALKL---LSSNPTRLDPSLYLKILQLCIDKKAKKQGHLIHTHLITNGFGSDLHLN 68

Query: 451 TALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIR 510
           T LI  Y K G+++ AR +FD M  +S V+W  M+SGY  +G   +A  LFS+M H G++
Sbjct: 69  TKLIIFYVKVGDVIAARNVFDGMPERSVVSWTAMVSGYSQNGRFEKAFVLFSDMRHCGVK 128

Query: 511 PSG--VTFLSVLYACSHA----GLVREGDEI-FQSMIHDHGFKPLAEHYACMVDILGRAG 563
            +   V F S       A    G + E D + + +MI  +  +  A+   CM   + R G
Sbjct: 129 ANHALVDFHSKCGKMEDASYLFGTMMERDVVSWNAMIGGYAVQGFADDSFCMFRSMLRGG 188


>gi|77551591|gb|ABA94388.1| PPR986-12, putative, expressed [Oryza sativa Japonica Group]
          Length = 694

 Score =  430 bits (1105), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 240/643 (37%), Positives = 363/643 (56%), Gaps = 2/643 (0%)

Query: 144 FVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRN 203
           F+ A LV+LY K     +A       P    V + + ISG  ++     ++  F  M+R 
Sbjct: 52  FICAHLVNLYSKLDLPAAAAAALASDPHPTVVSYTAFISGAAQHGRPLPALSAFAGMLRL 111

Query: 204 GGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHD-HVYVLTGLVSFYSKCGEVE 262
           G    D T  +A   A +      +G +I  L ++ G+     +V    +  Y K G ++
Sbjct: 112 GLRPNDFTFPSAFKAAASAPPRSTIGPQIHSLAIRFGYLPVDPFVSCAALDMYFKTGRLK 171

Query: 263 RAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFY 322
            A  LF ++   ++++ NA+++    +G+   ++  +  L  +    N  +         
Sbjct: 172 LARHLFGEMPNRNVVAWNAVMTNAVLDGRPLETIEAYFGLREAGGLPNVVSACAFFNACA 231

Query: 323 PFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNA 382
              +L L    H F +K G   + SVL ++   Y +      AR +FD    ++  SW +
Sbjct: 232 GAMYLSLGEQFHGFVVKCGFEMDVSVLNSMVDFYGKCRCAGKARAVFDGMGVRNSVSWCS 291

Query: 383 MIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRN 442
           M+A Y QNG  EEA + +   + S   P    VSS L+ CA L  + LG+ +H +     
Sbjct: 292 MVAAYAQNGAEEEAFAAYLGARRSGEEPTDFMVSSALTTCAGLLGLHLGRALHAVAVRSC 351

Query: 443 FESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFS 502
            ++NI+V++AL+DMY KCG + +A ++F     ++ VTWN MI GY   G    AL +F 
Sbjct: 352 IDANIFVASALVDMYGKCGCVEDAEQIFYETPQRNLVTWNAMIGGYAHIGDAQNALLVFD 411

Query: 503 EMLHSG-IRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGR 561
           +M+ SG   P+ +T ++V+ +CS  GL ++G E+F++M    G +P  EHYAC+VD+LGR
Sbjct: 412 DMIRSGETAPNYITLVNVITSCSRGGLTKDGYELFETMRERFGIEPRTEHYACVVDLLGR 471

Query: 562 AGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLL 621
           AG  E+A E I+G+ + P  +VWGALLGAC +H  T L R+A+EKLFELDP++ G HVLL
Sbjct: 472 AGMEEQAYEVIQGMPMRPSISVWGALLGACKMHGKTELGRIAAEKLFELDPQDSGNHVLL 531

Query: 622 SNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAML 681
           SN++++   + +A  +R+ +K   + K PGC+ +      HVF + D  H     I A+L
Sbjct: 532 SNMFASAGRWAEATDIRKEMKNVGIKKDPGCSWVTWKNVVHVFRAKDTKHEMYNEIQALL 591

Query: 682 EKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNL 741
            KL  +M+ AG+  +T  +L+D+EEEEKE  +  HSEKLA+AFGLI   PG  IRI+KNL
Sbjct: 592 SKLRKQMQAAGYMPDTQYSLYDLEEEEKESEVFQHSEKLALAFGLICIPPGVPIRIMKNL 651

Query: 742 RVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           R+C+DCH A KFIS + GR I+VRD NRFHHFK   CSCGDYW
Sbjct: 652 RICVDCHRAFKFISGIVGREIIVRDNNRFHHFKQYQCSCGDYW 694



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 114/432 (26%), Positives = 209/432 (48%), Gaps = 7/432 (1%)

Query: 66  SIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRS 125
           S P P +  +   I G + +  P  ++  +  + +   L P++FT+     AA++   RS
Sbjct: 76  SDPHPTVVSYTAFISGAAQHGRPLPALSAFAGMLR-LGLRPNDFTFPSAFKAAASAPPRS 134

Query: 126 -IGVLLHGHAIVSGY-GSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISG 183
            IG  +H  AI  GY   D FV  A +D+YFK   +K AR +F +MP ++ V WN++++ 
Sbjct: 135 TIGPQIHSLAIRFGYLPVDPFVSCAALDMYFKTGRLKLARHLFGEMPNRNVVAWNAVMTN 194

Query: 184 LMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHD 243
            + +    ++I  +  + R  G   +  S  A   A A    L LG +     +K GF  
Sbjct: 195 AVLDGRPLETIEAYFGL-REAGGLPNVVSACAFFNACAGAMYLSLGEQFHGFVVKCGFEM 253

Query: 244 HVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLL 303
            V VL  +V FY KC    +A  +F  +   + +S  +M++ Y  NG  E +   +    
Sbjct: 254 DVSVLNSMVDFYGKCRCAGKARAVFDGMGVRNSVSWCSMVAAYAQNGAEEEAFAAYLGAR 313

Query: 304 ASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEME 363
            S E      +   +        LHL   +H+  ++S I +N  V +AL  +Y +   +E
Sbjct: 314 RSGEEPTDFMVSSALTTCAGLLGLHLGRALHAVAVRSCIDANIFVASALVDMYGKCGCVE 373

Query: 364 AARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEM-QASKVAPNPVTVSSILSAC 422
            A ++F E+ +++L +WNAMI GY   G  + A+ +F +M ++ + APN +T+ +++++C
Sbjct: 374 DAEQIFYETPQRNLVTWNAMIGGYAHIGDAQNALLVFDDMIRSGETAPNYITLVNVITSC 433

Query: 423 AQLGAISLGKWVHELVKSR-NFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVT- 480
           ++ G    G  + E ++ R   E        ++D+  + G   +A E+   M  +  ++ 
Sbjct: 434 SRGGLTKDGYELFETMRERFGIEPRTEHYACVVDLLGRAGMEEQAYEVIQGMPMRPSISV 493

Query: 481 WNTMISGYGLHG 492
           W  ++    +HG
Sbjct: 494 WGALLGACKMHG 505



 Score = 89.7 bits (221), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 67/284 (23%), Positives = 132/284 (46%), Gaps = 3/284 (1%)

Query: 12  FLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPD 71
           F +   GA   S   Q H  ++  GF+ D+S +  +       +    ARA+F  +   +
Sbjct: 226 FFNACAGAMYLSLGEQFHGFVVKCGFEMDVSVLNSMVDFYGKCRCAGKARAVFDGMGVRN 285

Query: 72  LFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLH 131
              +  ++  ++ N   + +   Y   R+ +   P +F  S  L+  +      +G  LH
Sbjct: 286 SVSWCSMVAAYAQNGAEEEAFAAYLGARR-SGEEPTDFMVSSALTTCAGLLGLHLGRALH 344

Query: 132 GHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQ 191
             A+ S   +++FV +ALVD+Y K   V+ A ++F + P+++ V WN+MI G       Q
Sbjct: 345 AVAVRSCIDANIFVASALVDMYGKCGCVEDAEQIFYETPQRNLVTWNAMIGGYAHIGDAQ 404

Query: 192 DSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEI-QCLGLKLGFHDHVYVLTG 250
           +++ VF DM+R+G T  +  ++  V+ + +     + G E+ + +  + G          
Sbjct: 405 NALLVFDDMIRSGETAPNYITLVNVITSCSRGGLTKDGYELFETMRERFGIEPRTEHYAC 464

Query: 251 LVSFYSKCGEVERAELLFRDI-VRPDLISCNAMISGYTCNGKTE 293
           +V    + G  E+A  + + + +RP +    A++     +GKTE
Sbjct: 465 VVDLLGRAGMEEQAYEVIQGMPMRPSISVWGALLGACKMHGKTE 508


>gi|21780142|gb|AAM77644.1|AF517844_1 hypothetical protein [Arabidopsis thaliana]
          Length = 603

 Score =  430 bits (1105), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 217/581 (37%), Positives = 335/581 (57%), Gaps = 5/581 (0%)

Query: 208 LDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKC---GEVERA 264
           +D+ +    +  +++   LR  M+IQ   +K    D V  +  L++F ++      +  A
Sbjct: 24  IDTVNTQNPILLISKCNSLRELMQIQAYAIKSHIED-VSFVAKLINFCTESPTESSMSYA 82

Query: 265 ELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPF 324
             LF  +  PD++  N+M  GY+          LF ++L      ++ T   L+      
Sbjct: 83  RHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVA 142

Query: 325 GHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMI 384
             L     +H   +K G+  N  V   L  +Y+   ++++AR +FD   E  +  +NAMI
Sbjct: 143 KALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARXVFDRIVEPCVVCYNAMI 202

Query: 385 AGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFE 444
            GY +     EA+SLF+EMQ   + PN +T+ S+LS+CA LG++ LGKW+H+  K  +F 
Sbjct: 203 TGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFC 262

Query: 445 SNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEM 504
             + V+TALIDM+AKCG++ +A  +F+ M +K    W+ MI  Y  HG   +++ +F  M
Sbjct: 263 KYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERM 322

Query: 505 LHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQ 564
               ++P  +TFL +L ACSH G V EG + F  M+   G  P  +HY  MVD+L  AG 
Sbjct: 323 RSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSXAGN 382

Query: 565 LEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNI 624
           LE A EFI  L + P P +W  LL AC  H + +LA   SE++FELD  + G +V+LSN+
Sbjct: 383 LEDAYEFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYVILSNL 442

Query: 625 YSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKL 684
           Y+  + +    ++R+V+K RK  K PGC+ IEV    H F SGD +   +T ++  L+++
Sbjct: 443 YARNKKWEYVDSLRKVMKDRKAVKVPGCSSIEVNNVVHEFFSGDGVKSATTKLHRALDEM 502

Query: 685 NGKMREAGFQTETVTALH-DVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRV 743
             +++ +G+  +T   +H ++ ++EKE+ ++ HSEKLAI FGL+ T PGT IR++KNLRV
Sbjct: 503 VKELKLSGYVPDTSMVVHANMNDQEKEITLRYHSEKLAITFGLLNTPPGTTIRVVKNLRV 562

Query: 744 CLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           C DCH A K IS + GR +V RD  RFHHF+ G CSCGD+W
Sbjct: 563 CRDCHNAAKLISLIFGRKVVXRDVQRFHHFEDGKCSCGDFW 603



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 109/446 (24%), Positives = 200/446 (44%), Gaps = 54/446 (12%)

Query: 3   MKTPQSRNLFLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDF---KATCY 59
           + T  ++N  L L+    +  +L Q  A  I    + D+S V KL +  ++     +  Y
Sbjct: 24  IDTVNTQNPIL-LISKCNSLRELMQIQAYAIKSHIE-DVSFVAKLINFCTESPTESSMSY 81

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           AR LF ++ +PD+ +FN + RG+S    P      +  + ++  L PDN+T+  +L A +
Sbjct: 82  ARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGIL-PDNYTFPSLLKACA 140

Query: 120 ACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNS 179
                  G  LH  ++  G   +++V   L+++Y +   V SAR VFD++ E   V +N+
Sbjct: 141 VAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARXVFDRIVEPCVVCYNA 200

Query: 180 MISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVA--AVLPAVAEVQELRLGMEIQCLGL 237
           MI+G  +     +++ +F +M    G +L    +   +VL + A +  L LG  I     
Sbjct: 201 MITGYARRNRPNEALSLFREM---QGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAK 257

Query: 238 KLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLR 297
           K  F  +V V T L+  ++KCG ++ A  +F  +   D  + +AMI  Y  +GK E S+ 
Sbjct: 258 KHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSML 317

Query: 298 LFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYS 357
           +F ++ +   + +  T +GL           L  C H+                      
Sbjct: 318 MFERMRSENVQPDEITFLGL-----------LNACSHT---------------------- 344

Query: 358 RLNEMEAARKLFDESSEK-----SLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNP 412
               +E  RK F +   K     S+  + +M+   +  G  E+A     ++    ++P P
Sbjct: 345 --GRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSXAGNLEDAYEFIDKLP---ISPTP 399

Query: 413 VTVSSILSACAQLGAISLGKWVHELV 438
           +    +L+AC+    + L + V E +
Sbjct: 400 MLWRILLAACSSHNNLDLAEKVSERI 425


>gi|297743264|emb|CBI36131.3| unnamed protein product [Vitis vinifera]
          Length = 550

 Score =  429 bits (1104), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 211/465 (45%), Positives = 291/465 (62%), Gaps = 10/465 (2%)

Query: 323 PFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNA 382
           P   LH   C+      +G   ++ + T L  +Y   + + +AR LFD   + ++  WN 
Sbjct: 93  PGKQLHAQVCL------AGFGFDTVIATKLVNLYCVCDSLSSARLLFDRIPKHNIFLWNV 146

Query: 383 MIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRN 442
           +I GY  NG  E A+ L+ +M    + P+  T   +L ACA L AI  G+ +HE V    
Sbjct: 147 LIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACAALSAIEHGREIHEHVVQTG 206

Query: 443 FESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEV---TWNTMISGYGLHGHGLEALQ 499
           +E +++V  ALIDMYAKCG +  ARE+FD +  +  V   +WN MI+GY +HGH  EAL 
Sbjct: 207 WEKDVFVGAALIDMYAKCGCVGSAREVFDKILVRDAVLVVSWNAMITGYAMHGHATEALD 266

Query: 500 LFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDIL 559
           LF EM +   +P  +TF+ VL ACSH GL+ EG   F++MI D+   P  +HY CMVD+L
Sbjct: 267 LFEEM-NRVAKPDHITFVGVLSACSHGGLLEEGWMFFETMIRDYKIDPTVQHYTCMVDLL 325

Query: 560 GRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHV 619
           G +G+L++A   I  + V P   VWGALL +C IH +  L  +A E+L EL+P++ G +V
Sbjct: 326 GHSGRLDEAYNLIMQMKVLPDSGVWGALLNSCKIHANVELGEIALERLIELEPDDAGNYV 385

Query: 620 LLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYA 679
           +LSNIY+    +   A +R+++  R+L K+  C+ IEV    H F SGD  HP S  IY+
Sbjct: 386 ILSNIYAQAGKWEGVAKLRKLMTDRRLKKSIACSWIEVKNKVHAFLSGDTSHPLSDEIYS 445

Query: 680 MLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIK 739
            LE++ G M+EAG+   T +  HDVE++EK  M+  HSE+LAIAFGLI+T PGT + I K
Sbjct: 446 ELERVGGLMKEAGYSPSTGSVFHDVEDDEKANMVCSHSERLAIAFGLISTPPGTRLLITK 505

Query: 740 NLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           NLR+C DCH A KFISK+T R I VRD NR+HHFK GVCSCGDYW
Sbjct: 506 NLRICEDCHVAIKFISKITEREITVRDVNRYHHFKDGVCSCGDYW 550



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 76/204 (37%), Positives = 116/204 (56%), Gaps = 8/204 (3%)

Query: 5   TPQSRNLFLSLLKGAKTQSQLT---QTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYAR 61
           TP   N + SLL+    +  +    Q HAQ+ + GF  D    TKL +      +   AR
Sbjct: 72  TPTYSN-YASLLQSCIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCDSLSSAR 130

Query: 62  ALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASAC 121
            LF  IPK ++FL+NV+IRG++ N   ++++  Y  +  +  L PDNFT+ FVL A +A 
Sbjct: 131 LLFDRIPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQMF-DYGLVPDNFTFPFVLKACAAL 189

Query: 122 CDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVL---WN 178
                G  +H H + +G+  D+FVGAAL+D+Y K   V SAR+VFDK+  +D VL   WN
Sbjct: 190 SAIEHGREIHEHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVRDAVLVVSWN 249

Query: 179 SMISGLMKNCCFQDSIWVFGDMVR 202
           +MI+G   +    +++ +F +M R
Sbjct: 250 AMITGYAMHGHATEALDLFEEMNR 273



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 116/450 (25%), Positives = 200/450 (44%), Gaps = 54/450 (12%)

Query: 37  FQNDLSTVTKLAHRLSDFKATCYAR-ALFFSIPKPDLFLFNVIIRGFSNNEMPKSSI--C 93
           F+  L   +  +   S  K T +A  +L +  P P    F      F NN+    +I  C
Sbjct: 5   FKRKLKRPSPCSALSSLLKPTFFASLSLQYQSPNPS---FTSSAPQFDNNQTHLKAIPSC 61

Query: 94  FYTHLRKNTALTPDNFTYSFVLSAASACCDRSI---GVLLHGHAIVSGYGSDLFVGAALV 150
              H  ++T LTP   TYS   S   +C  R     G  LH    ++G+G D  +   LV
Sbjct: 62  SNPH-AESTCLTP---TYSNYASLLQSCIARKAIKPGKQLHAQVCLAGFGFDTVIATKLV 117

Query: 151 DLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDS 210
           +LY     + SAR +FD++P+ +  LWN +I G   N  ++ ++ ++  M  + G   D+
Sbjct: 118 NLYCVCDSLSSARLLFDRIPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQMF-DYGLVPDN 176

Query: 211 TSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRD 270
            +   VL A A +  +  G EI    ++ G+   V+V   L+  Y+KCG V  A  +F  
Sbjct: 177 FTFPFVLKACAALSAIEHGREIHEHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDK 236

Query: 271 IVRPD---LISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHL 327
           I+  D   ++S NAMI+GY  +G    +L LF ++   A + +  T VG+          
Sbjct: 237 ILVRDAVLVVSWNAMITGYAMHGHATEALDLFEEMNRVA-KPDHITFVGV---------- 285

Query: 328 HLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGY 387
            L+ C H   L+ G +   +++                    D   + ++  +  M+   
Sbjct: 286 -LSACSHGGLLEEGWMFFETMIR-------------------DYKIDPTVQHYTCMVDLL 325

Query: 388 TQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHE-LVKSRNFESN 446
             +G  +EA +L  +M   KV P+     ++L++C     + LG+   E L++    ++ 
Sbjct: 326 GHSGRLDEAYNLIMQM---KVLPDSGVWGALLNSCKIHANVELGEIALERLIELEPDDAG 382

Query: 447 IYVSTALIDMYAKCGNIVEARELFDLMSHK 476
            YV   L ++YA+ G      +L  LM+ +
Sbjct: 383 NYV--ILSNIYAQAGKWEGVAKLRKLMTDR 410



 Score = 83.2 bits (204), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 52/193 (26%), Positives = 92/193 (47%), Gaps = 3/193 (1%)

Query: 404 QASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNI 463
           +++ + P     +S+L +C    AI  GK +H  V    F  +  ++T L+++Y  C ++
Sbjct: 67  ESTCLTPTYSNYASLLQSCIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCDSL 126

Query: 464 VEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYAC 523
             AR LFD +   +   WN +I GY  +G    A+QL+ +M   G+ P   TF  VL AC
Sbjct: 127 SSARLLFDRIPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKAC 186

Query: 524 SHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAV 583
           +    +  G EI + ++   G++      A ++D+  + G +  A E    + V     V
Sbjct: 187 AALSAIEHGREIHEHVVQT-GWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVRDAVLV 245

Query: 584 --WGALLGACMIH 594
             W A++    +H
Sbjct: 246 VSWNAMITGYAMH 258


>gi|357135382|ref|XP_003569289.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g09950-like [Brachypodium distachyon]
          Length = 1054

 Score =  429 bits (1104), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 264/771 (34%), Positives = 417/771 (54%), Gaps = 16/771 (2%)

Query: 25   LTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSN 84
            L Q  A+++  G  +DL   + L    +       A+ +F ++ + +    N +I G   
Sbjct: 289  LDQVFARVLKSGSSSDLYVGSALVSAFARHGMLDEAKDIFINLKERNAVTLNGLIVGLVK 348

Query: 85   NEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVL----LHGHAIVSGYG 140
                + ++  +   R +  +  D F    +LSA +       G++    +HGH + +G  
Sbjct: 349  QHCSEEAVGIFMGTRDSFVVNTDTFV--VLLSAVAEFSIPEDGLMRGREVHGHILRTGL- 405

Query: 141  SDLFVGAA--LVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFG 198
             DL +  +  LV++Y K   +  A +VF  +  +D V WN++IS L +N   + ++  + 
Sbjct: 406  IDLKIALSNGLVNMYAKCGAIDKASRVFRLLCARDRVSWNTIISVLDQNGFCEGAMMNYC 465

Query: 199  DMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKC 258
             M+R G     + +  + L + A ++ L  G ++ C  +K G      V   LV  Y  C
Sbjct: 466  -MMRQGCISPSNFAAISGLSSCASLRLLTAGQQVHCDAVKWGLDLDTSVSNALVKMYGDC 524

Query: 259  GEVERAELLFRDIVRPDLISCNAMIS-GYTCNGKTESSLRLFRQLLASAERVNSSTIVGL 317
            G    +  +F  +   D++S N+++    + +  T  S+ +F  ++ S    N  T V L
Sbjct: 525  GARSESWEIFNSMAEHDIVSWNSIMGVMVSSHAPTAESVEVFSNMMRSGLTPNKVTFVNL 584

Query: 318  IPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDE-SSEKS 376
            +    P   L L   +H+  LK G + +++V  AL + Y++  +M++  +LF   S  + 
Sbjct: 585  LSALSPLSVLELGKQVHAVVLKHGAIEDNAVDNALMSCYAKSGDMDSCEQLFSSMSGRRD 644

Query: 377  LASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHE 436
              SWN+MI+GY  NG  +E +     M  S    +  T S +L+ACA + A+  G  +H 
Sbjct: 645  AVSWNSMISGYIYNGHLQETMDCVWLMMHSNQMLDCCTFSIVLNACASVAALERGMEMHA 704

Query: 437  LVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLE 496
                   ES++ V +AL+DMY+KCG I  A ++F+ MS K+E +WN+MISGY  HG G +
Sbjct: 705  FGIRSQLESDVVVESALLDMYSKCGRIDYASKVFNSMSQKNEFSWNSMISGYARHGLGEK 764

Query: 497  ALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMV 556
            AL++F EM  +G  P  VTF+SVL ACSHAGLV  G + F+ M+ DHG  P  EHY+C++
Sbjct: 765  ALEIFEEMQRNGACPDHVTFVSVLSACSHAGLVDRGLDYFE-MMEDHGILPHIEHYSCVI 823

Query: 557  DILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKD---TNLARVASEKLFELDPE 613
            D+LGRAG+L K  E+I  + ++P   +W  +L AC   KD    +L + AS  L EL+P+
Sbjct: 824  DLLGRAGKLLKIQEYINRMPMKPNTLIWRTVLVACRQSKDGDRIDLGKEASRMLLELEPQ 883

Query: 614  NVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQ 673
            N   +VL SN Y+A   +   A  R  +    + K  G + + +G   H F +GD+ HP 
Sbjct: 884  NPVNYVLASNFYAATGRWEDTAKARAAMGGAAMKKEAGQSWVTLGDGVHTFIAGDRSHPN 943

Query: 674  STAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGT 733
            +  IY  L  L  K++ AG+   T  AL+D+EEE KE ++  HSEKLA+AF L  +    
Sbjct: 944  TKEIYEKLNFLIQKIKNAGYVPMTEFALYDLEEENKEELLSYHSEKLAVAFVLTRSSSDV 1003

Query: 734  EIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
             IRI+KNLRVC DCHTA ++IS++  R I++RD+ RFHHF+ G CSCGDYW
Sbjct: 1004 PIRIMKNLRVCGDCHTAFRYISQIVCRQIILRDSIRFHHFEDGKCSCGDYW 1054



 Score =  179 bits (454), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 147/535 (27%), Positives = 258/535 (48%), Gaps = 28/535 (5%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSIC-FYTHLRKNTA--LTPDNFTYSFVLS 116
           A+ +F + P  DL  +N ++  ++      S+   F   L  ++A  L P+  T+  +++
Sbjct: 218 AQQVFDTTPVRDLITWNALMSVYAKKGYVVSTFTLFMAMLHDDSAIELRPNEHTFGSLIT 277

Query: 117 AAS-ACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTV 175
           A S + C   +   +    + SG  SDL+VG+ALV  + +   +  A+ +F  + E++ V
Sbjct: 278 ATSLSSCSSGVLDQVFARVLKSGSSSDLYVGSALVSAFARHGMLDEAKDIFINLKERNAV 337

Query: 176 LWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEV----QELRLGME 231
             N +I GL+K  C ++++ +F  M       +++ +   +L AVAE       L  G E
Sbjct: 338 TLNGLIVGLVKQHCSEEAVGIF--MGTRDSFVVNTDTFVVLLSAVAEFSIPEDGLMRGRE 395

Query: 232 IQCLGLKLGFHDHVYVLT-GLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNG 290
           +    L+ G  D    L+ GLV+ Y+KCG +++A  +FR +   D +S N +IS    NG
Sbjct: 396 VHGHILRTGLIDLKIALSNGLVNMYAKCGAIDKASRVFRLLCARDRVSWNTIISVLDQNG 455

Query: 291 KTESSLR---LFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSS 347
             E ++    + RQ   S    N + I GL         L     +H   +K G+  ++S
Sbjct: 456 FCEGAMMNYCMMRQGCISPS--NFAAISGLSSC-ASLRLLTAGQQVHCDAVKWGLDLDTS 512

Query: 348 VLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIA-GYTQNGLTEEAISLFQEMQAS 406
           V  AL  +Y        + ++F+  +E  + SWN+++    + +  T E++ +F  M  S
Sbjct: 513 VSNALVKMYGDCGARSESWEIFNSMAEHDIVSWNSIMGVMVSSHAPTAESVEVFSNMMRS 572

Query: 407 KVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEA 466
            + PN VT  ++LSA + L  + LGK VH +V       +  V  AL+  YAK G++   
Sbjct: 573 GLTPNKVTFVNLLSALSPLSVLELGKQVHAVVLKHGAIEDNAVDNALMSCYAKSGDMDSC 632

Query: 467 RELFDLMSHKSE-VTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSH 525
            +LF  MS + + V+WN+MISGY  +GH  E +     M+HS       TF  VL AC+ 
Sbjct: 633 EQLFSSMSGRRDAVSWNSMISGYIYNGHLQETMDCVWLMMHSNQMLDCCTFSIVLNACAS 692

Query: 526 AGLVREGDEIFQSMIHDHGFKPLAEH----YACMVDILGRAGQLEKALEFIKGLA 576
              +  G E     +H  G +   E      + ++D+  + G+++ A +    ++
Sbjct: 693 VAALERGME-----MHAFGIRSQLESDVVVESALLDMYSKCGRIDYASKVFNSMS 742



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 132/482 (27%), Positives = 225/482 (46%), Gaps = 31/482 (6%)

Query: 130 LHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCC 189
           LH   +  G   DLF+   LV+LY K S + +AR+VFD M E++ V W  ++SG + +  
Sbjct: 78  LHLELVKRGLTHDLFLSNHLVNLYAKGSRLAAARQVFDGMLERNAVSWTCLVSGYVLSGI 137

Query: 190 FQDSIWVFGDMVRNGGTWLDST--SVAAVLPAVAEVQELRLGMEIQCLGL--KLGFHDHV 245
             ++  VF  M+  G  +   T  +  +VL A  +     L   +Q  GL  K  +  + 
Sbjct: 138 TDEAFRVFKAMLWEGSEFSRPTPFTFGSVLRACQDAGPDLLAFAVQVHGLVSKTIYASNT 197

Query: 246 YVLTGLVSFYSKC--GEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLL 303
            V   L+S Y  C  G   +A+ +F      DLI+ NA++S Y   G   S+  LF  +L
Sbjct: 198 TVCNALISMYGNCSVGLPLQAQQVFDTTPVRDLITWNALMSVYAKKGYVVSTFTLFMAML 257

Query: 304 ASAERVNSSTIVGLIPVFYPFGHL----HLTNC-------IHSFCLKSGIVSNSSVLTAL 352
                 +  + + L P  + FG L     L++C       + +  LKSG  S+  V +AL
Sbjct: 258 ------HDDSAIELRPNEHTFGSLITATSLSSCSSGVLDQVFARVLKSGSSSDLYVGSAL 311

Query: 353 STVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNP 412
            + ++R   ++ A+ +F    E++  + N +I G  +   +EEA+ +F   + S V  N 
Sbjct: 312 VSAFARHGMLDEAKDIFINLKERNAVTLNGLIVGLVKQHCSEEAVGIFMGTRDSFVV-NT 370

Query: 413 VTVSSILSACAQLG----AISLGKWVH-ELVKSRNFESNIYVSTALIDMYAKCGNIVEAR 467
            T   +LSA A+       +  G+ VH  ++++   +  I +S  L++MYAKCG I +A 
Sbjct: 371 DTFVVLLSAVAEFSIPEDGLMRGREVHGHILRTGLIDLKIALSNGLVNMYAKCGAIDKAS 430

Query: 468 ELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAG 527
            +F L+  +  V+WNT+IS    +G    A+  +  M    I PS    +S L +C+   
Sbjct: 431 RVFRLLCARDRVSWNTIISVLDQNGFCEGAMMNYCMMRQGCISPSNFAAISGLSSCASLR 490

Query: 528 LVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGAL 587
           L+  G ++    +   G          +V + G  G   ++ E    +A E     W ++
Sbjct: 491 LLTAGQQVHCDAV-KWGLDLDTSVSNALVKMYGDCGARSESWEIFNSMA-EHDIVSWNSI 548

Query: 588 LG 589
           +G
Sbjct: 549 MG 550



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 80/278 (28%), Positives = 135/278 (48%), Gaps = 21/278 (7%)

Query: 333 IHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGL 392
           +H   +K G+  +  +   L  +Y++ + + AAR++FD   E++  SW  +++GY  +G+
Sbjct: 78  LHLELVKRGLTHDLFLSNHLVNLYAKGSRLAAARQVFDGMLERNAVSWTCLVSGYVLSGI 137

Query: 393 TEEAISLFQEM--QASKVA-PNPVTVSSILSACAQLGA--ISLGKWVHELVKSRNFESNI 447
           T+EA  +F+ M  + S+ + P P T  S+L AC   G   ++    VH LV    + SN 
Sbjct: 138 TDEAFRVFKAMLWEGSEFSRPTPFTFGSVLRACQDAGPDLLAFAVQVHGLVSKTIYASNT 197

Query: 448 YVSTALIDMYAKC--GNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEML 505
            V  ALI MY  C  G  ++A+++FD    +  +TWN ++S Y   G+ +    LF  ML
Sbjct: 198 TVCNALISMYGNCSVGLPLQAQQVFDTTPVRDLITWNALMSVYAKKGYVVSTFTLFMAML 257

Query: 506 HSG----IRPSGVTFLSVLYA-----CSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMV 556
           H      +RP+  TF S++ A     CS   L    D++F  ++       L    A +V
Sbjct: 258 HDDSAIELRPNEHTFGSLITATSLSSCSSGVL----DQVFARVLKSGSSSDLYVGSA-LV 312

Query: 557 DILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIH 594
               R G L++A +    L       + G ++G    H
Sbjct: 313 SAFARHGMLDEAKDIFINLKERNAVTLNGLIVGLVKQH 350


>gi|224089225|ref|XP_002308660.1| predicted protein [Populus trichocarpa]
 gi|222854636|gb|EEE92183.1| predicted protein [Populus trichocarpa]
          Length = 487

 Score =  429 bits (1104), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 208/475 (43%), Positives = 300/475 (63%), Gaps = 12/475 (2%)

Query: 322 YPF--------GHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYS--RLNE--MEAARKLF 369
           YPF        G+L+L   +H   +K G     +V   L  +Y   R  E  +E ARK+F
Sbjct: 13  YPFVLKACAGIGNLNLGKSVHGSVMKFGFGDEVNVQNTLVHMYCCCRGGEGGIEFARKVF 72

Query: 370 DESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAIS 429
           DE  +    SW+AMI GY + G + +AI+LF+EMQ   V P+ +T+ S+LSAC  LGA+ 
Sbjct: 73  DEMYKSDSVSWSAMIGGYVRVGRSSDAINLFREMQIKGVCPDEITMVSVLSACTGLGALE 132

Query: 430 LGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYG 489
           LGKWV   V+    + N+ +S ALIDM+AKCG++ +A  LF  M  ++ V+W ++I G  
Sbjct: 133 LGKWVESYVEKERVQKNVELSNALIDMFAKCGDVDKATNLFRSMRERNIVSWTSVIGGLA 192

Query: 490 LHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLA 549
           +HG G+EA+ +F EM+ SG+ P  V F+ +L ACSH+GLV +G   F SM  D    P  
Sbjct: 193 MHGRGVEAVAVFEEMVRSGVTPDDVVFIGLLSACSHSGLVDKGKRYFDSMRKDFSIVPKI 252

Query: 550 EHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFE 609
           EHY CMVD+L RAG +++AL+F++ + ++P P VW  L+ AC  H +  L    + +L  
Sbjct: 253 EHYGCMVDMLCRAGLVKEALKFVQEMPIDPNPVVWRTLINACRAHGELKLGEKITRQLIR 312

Query: 610 LDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQ 669
            +P +   +VLLSNIY+   D+ +   +R+ +  + + K PG T+IE+    + F +GD+
Sbjct: 313 NEPMHESNYVLLSNIYAKMSDWEKKTRIREAMDMKGMKKIPGSTMIELDNEIYEFVAGDK 372

Query: 670 LHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIAT 729
            H QS  IY M++++  +M+ AG+   T   L D+++E+KE  +  HSEKLAIAF L+ T
Sbjct: 373 SHAQSKEIYEMVDEMGKEMKRAGYMPTTTEVLLDIDDEDKEDTLNRHSEKLAIAFALLNT 432

Query: 730 EPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
            PGT IRI+KNLRVC DCH+A+KFISK+  R IVVRD NRFHHFK G+CSC D+W
Sbjct: 433 PPGTLIRIVKNLRVCDDCHSASKFISKIYNREIVVRDRNRFHHFKNGLCSCRDFW 487



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 90/318 (28%), Positives = 150/318 (47%), Gaps = 15/318 (4%)

Query: 216 VLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKC----GEVERAELLFRDI 271
           VL A A +  L LG  +    +K GF D V V   LV  Y  C    G +E A  +F ++
Sbjct: 16  VLKACAGIGNLNLGKSVHGSVMKFGFGDEVNVQNTLVHMYCCCRGGEGGIEFARKVFDEM 75

Query: 272 VRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTN 331
            + D +S +AMI GY   G++  ++ LFR++       +  T+V ++      G L L  
Sbjct: 76  YKSDSVSWSAMIGGYVRVGRSSDAINLFREMQIKGVCPDEITMVSVLSACTGLGALELGK 135

Query: 332 CIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNG 391
            + S+  K  +  N  +  AL  ++++  +++ A  LF    E+++ SW ++I G   +G
Sbjct: 136 WVESYVEKERVQKNVELSNALIDMFAKCGDVDKATNLFRSMRERNIVSWTSVIGGLAMHG 195

Query: 392 LTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGK-WVHELVKSRNFESNIYVS 450
              EA+++F+EM  S V P+ V    +LSAC+  G +  GK +   + K  +    I   
Sbjct: 196 RGVEAVAVFEEMVRSGVTPDDVVFIGLLSACSHSGLVDKGKRYFDSMRKDFSIVPKIEHY 255

Query: 451 TALIDMYAKCGNIVEARELFDLMS-HKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGI 509
             ++DM  + G + EA +    M    + V W T+I+    HG     L+L  ++    I
Sbjct: 256 GCMVDMLCRAGLVKEALKFVQEMPIDPNPVVWRTLINACRAHGE----LKLGEKITRQLI 311

Query: 510 R-----PSGVTFLSVLYA 522
           R      S    LS +YA
Sbjct: 312 RNEPMHESNYVLLSNIYA 329



 Score =  126 bits (316), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 107/417 (25%), Positives = 192/417 (46%), Gaps = 55/417 (13%)

Query: 106 PDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYF----KFSWVKS 161
           P+ FTY FVL A +   + ++G  +HG  +  G+G ++ V   LV +Y         ++ 
Sbjct: 8   PNKFTYPFVLKACAGIGNLNLGKSVHGSVMKFGFGDEVNVQNTLVHMYCCCRGGEGGIEF 67

Query: 162 ARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVA 221
           ARKVFD+M + D+V W++MI G ++     D+I +F +M +  G   D  ++ +VL A  
Sbjct: 68  ARKVFDEMYKSDSVSWSAMIGGYVRVGRSSDAINLFREM-QIKGVCPDEITMVSVLSACT 126

Query: 222 EVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNA 281
            +  L LG  ++    K     +V +   L+  ++KCG+V++A  LFR +   +++S  +
Sbjct: 127 GLGALELGKWVESYVEKERVQKNVELSNALIDMFAKCGDVDKATNLFRSMRERNIVSWTS 186

Query: 282 MISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSG 341
           +I G   +G+   ++ +F +++ S    +    +GL+                S C  SG
Sbjct: 187 VIGGLAMHGRGVEAVAVFEEMVRSGVTPDDVVFIGLL----------------SACSHSG 230

Query: 342 IVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQ 401
           +V                   ++ RK F  S    +  +  M+    + GL +EA+   Q
Sbjct: 231 LVDKGK------------RYFDSMRKDF--SIVPKIEHYGCMVDMLCRAGLVKEALKFVQ 276

Query: 402 EMQASKVAPNPVTVSSILSACAQLGAISLG-KWVHELVKSRNFESNIYVSTALIDMYAKC 460
           EM    + PNPV   ++++AC   G + LG K   +L+++     + YV   L ++YAK 
Sbjct: 277 EMP---IDPNPVVWRTLINACRAHGELKLGEKITRQLIRNEPMHESNYV--LLSNIYAKM 331

Query: 461 GNI---VEARELFDLMSHKSEVTWNTMI----------SGYGLHGHGLEALQLFSEM 504
            +       RE  D+   K ++  +TMI          +G   H    E  ++  EM
Sbjct: 332 SDWEKKTRIREAMDMKGMK-KIPGSTMIELDNEIYEFVAGDKSHAQSKEIYEMVDEM 387



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 68/226 (30%), Positives = 107/226 (47%), Gaps = 8/226 (3%)

Query: 403 MQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKC-- 460
           M   K  PN  T   +L ACA +G ++LGK VH  V    F   + V   L+ MY  C  
Sbjct: 1   MLERKKLPNKFTYPFVLKACAGIGNLNLGKSVHGSVMKFGFGDEVNVQNTLVHMYCCCRG 60

Query: 461 --GNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLS 518
             G I  AR++FD M     V+W+ MI GY   G   +A+ LF EM   G+ P  +T +S
Sbjct: 61  GEGGIEFARKVFDEMYKSDSVSWSAMIGGYVRVGRSSDAINLFREMQIKGVCPDEITMVS 120

Query: 519 VLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVE 578
           VL AC+  G +  G  + +S +     +   E    ++D+  + G ++KA    + +  E
Sbjct: 121 VLSACTGLGALELGKWV-ESYVEKERVQKNVELSNALIDMFAKCGDVDKATNLFRSMR-E 178

Query: 579 PGPAVWGALLGACMIHKDTNLARVASEKLFE--LDPENVGYHVLLS 622
                W +++G   +H     A    E++    + P++V +  LLS
Sbjct: 179 RNIVSWTSVIGGLAMHGRGVEAVAVFEEMVRSGVTPDDVVFIGLLS 224


>gi|359496846|ref|XP_002272372.2| PREDICTED: uncharacterized protein LOC100258406 [Vitis vinifera]
          Length = 1286

 Score =  429 bits (1104), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 223/579 (38%), Positives = 343/579 (59%), Gaps = 2/579 (0%)

Query: 199 DMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGL-VSFYSK 257
           D+++ G    D    + +L     + ++  G  +    +   F D+  VL  + V+ Y+K
Sbjct: 76  DLIQRGSLVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAK 135

Query: 258 CGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGL 317
           CG ++ A  +F ++   D+++  A+I+G++ N +   +L LF Q+L    + N  T+  L
Sbjct: 136 CGCLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGFQPNHFTLSSL 195

Query: 318 IPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSL 377
           +        L     +H+FCLK G  S+  V +AL  +Y+R   M+AA+  FD    KS 
Sbjct: 196 LKASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSE 255

Query: 378 ASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHEL 437
            SWNA+I+G+ + G  E A+ L  +MQ     P   T SS+LSACA +GA+  GKWVH  
Sbjct: 256 VSWNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVLSACASIGALEQGKWVHAH 315

Query: 438 VKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEA 497
           +     +   ++   L+DMYAK G+I +A+ +FD +     V+WNTM++G   HG G E 
Sbjct: 316 MIKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKET 375

Query: 498 LQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVD 557
           L  F +ML  GI P+ ++FL VL ACSH+GL+ EG   F+ ++  +  +P   HY   VD
Sbjct: 376 LDRFEQMLRIGIEPNEISFLCVLTACSHSGLLDEGLYYFE-LMKKYKVEPDVPHYVTFVD 434

Query: 558 ILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGY 617
           +LGR G L++A  FI+ + +EP  AVWGALLGAC +HK+  L   A+E+ FELDP + G 
Sbjct: 435 LLGRVGLLDRAERFIREMPIEPTAAVWGALLGACRMHKNMELGVYAAERAFELDPHDSGP 494

Query: 618 HVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAI 677
            +LLSNIY++   +   A VR+++K+  + K P C+ +E+    H+F + D+ HP+   I
Sbjct: 495 RMLLSNIYASAGRWRDVAKVRKMMKESGVKKQPACSWVEIENAVHLFVANDETHPRIKEI 554

Query: 678 YAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRI 737
               E+++GK++E G+  +T   L  V+++E+E  ++ HSEKLA+AF L+ T  G+ IRI
Sbjct: 555 RGKWEEISGKIKEIGYVPDTSHVLLFVDQQEREEKLQYHSEKLALAFALLNTPTGSPIRI 614

Query: 738 IKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGG 776
            KN+RVC DCH A KF+SKV  R I+VRD NRFH F+ G
Sbjct: 615 KKNIRVCGDCHAAIKFVSKVVDREIIVRDTNRFHRFRDG 653



 Score =  125 bits (315), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 115/474 (24%), Positives = 203/474 (42%), Gaps = 53/474 (11%)

Query: 10  NLFLSLLKGAKTQSQLTQ---THAQIIIHGFQNDLSTVTKLAHRLSDFKATC----YARA 62
           NL+  LLK      ++ Q    HA ++   F   L     L + + +  A C     AR 
Sbjct: 88  NLYSKLLKECTRLGKVEQGRIVHAHLVDSHF---LDNHLVLQNIIVNMYAKCGCLDDARR 144

Query: 63  LFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACC 122
           +F  +P  D+  +  +I GFS N  P+ ++  +  + +     P++FT S +L A+ +  
Sbjct: 145 MFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLR-LGFQPNHFTLSSLLKASGSEH 203

Query: 123 DRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMIS 182
               G  LH   +  GY S ++VG+ALVD+Y +   + +A+  FD MP K  V WN++IS
Sbjct: 204 GLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALIS 263

Query: 183 GLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFH 242
           G  +    + ++ +   M R        T  ++VL A A +  L  G  +    +K G  
Sbjct: 264 GHARKGEGEHALHLLWKMQRKNFQPTHFT-YSSVLSACASIGALEQGKWVHAHMIKSGLK 322

Query: 243 DHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQL 302
              ++   L+  Y+K G ++ A+ +F  +V+PD++S N M++G   +G  + +L  F Q+
Sbjct: 323 LIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLDRFEQM 382

Query: 303 LASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEM 362
           L           +G+ P    F       C+ + C  SG++        L   Y      
Sbjct: 383 LR----------IGIEPNEISFL------CVLTACSHSGLLDEGLYYFELMKKY------ 420

Query: 363 EAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSAC 422
                      E  +  +   +    + GL + A    +EM    + P      ++L AC
Sbjct: 421 ---------KVEPDVPHYVTFVDLLGRVGLLDRAERFIREM---PIEPTAAVWGALLGAC 468

Query: 423 AQLGAISLGKWVHELVKSRNFESNIYVSTA---LIDMYAKCGNIVEARELFDLM 473
                + LG +  E    R FE + + S     L ++YA  G   +  ++  +M
Sbjct: 469 RMHKNMELGVYAAE----RAFELDPHDSGPRMLLSNIYASAGRWRDVAKVRKMM 518


>gi|145333540|ref|NP_001078415.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332658995|gb|AEE84395.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 462

 Score =  429 bits (1104), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 203/459 (44%), Positives = 304/459 (66%), Gaps = 1/459 (0%)

Query: 327 LHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAG 386
           + L   IHS  ++SG  S   V  +L  +Y+   ++ +A K+FD+  EK L +WN++I G
Sbjct: 4   VRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVING 63

Query: 387 YTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESN 446
           + +NG  EEA++L+ EM +  + P+  T+ S+LSACA++GA++LGK VH  +       N
Sbjct: 64  FAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRN 123

Query: 447 IYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLH 506
           ++ S  L+D+YA+CG + EA+ LFD M  K+ V+W ++I G  ++G G EA++LF  M  
Sbjct: 124 LHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMES 183

Query: 507 S-GIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQL 565
           + G+ P  +TF+ +LYACSH G+V+EG E F+ M  ++  +P  EH+ CMVD+L RAGQ+
Sbjct: 184 TEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQV 243

Query: 566 EKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIY 625
           +KA E+IK + ++P   +W  LLGAC +H D++LA  A  ++ +L+P + G +VLLSN+Y
Sbjct: 244 KKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMY 303

Query: 626 SAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLN 685
           ++E+ +     +R+ + +  + K PG +L+EVG   H F  GD+ HPQS AIYA L+++ 
Sbjct: 304 ASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMT 363

Query: 686 GKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCL 745
           G++R  G+  +      DVEEEEKE  +  HSEK+AIAF LI+T   + I ++KNLRVC 
Sbjct: 364 GRLRSEGYVPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCA 423

Query: 746 DCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           DCH A K +SKV  R IVVRD +RFHHFK G CSC DYW
Sbjct: 424 DCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 462



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 99/339 (29%), Positives = 167/339 (49%), Gaps = 23/339 (6%)

Query: 225 ELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMIS 284
           ++RLG  I  + ++ GF   +YV   L+  Y+ CG+V  A  +F  +   DL++ N++I+
Sbjct: 3   DVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVIN 62

Query: 285 GYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVS 344
           G+  NGK E +L L+ ++ +   + +  TIV L+      G L L   +H + +K G+  
Sbjct: 63  GFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTR 122

Query: 345 NSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQ 404
           N      L  +Y+R   +E A+ LFDE  +K+  SW ++I G   NG  +EAI LF+ M+
Sbjct: 123 NLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYME 182

Query: 405 ASK-VAPNPVTVSSILSACAQLGAISLG-KWVHELVKSRNFESNIYVSTALIDMYAKCGN 462
           +++ + P  +T   IL AC+  G +  G ++   + +    E  I     ++D+ A+ G 
Sbjct: 183 STEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQ 242

Query: 463 IVEARELFDLMSHKSEVT-WNTMISGYGLHGHG-------LEALQLFSEMLHSGIRPSGV 514
           + +A E    M  +  V  W T++    +HG         ++ LQL  E  HSG      
Sbjct: 243 VKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQL--EPNHSG----DY 296

Query: 515 TFLSVLYACSHAGLVREGD--EIFQSMIHDHGFKPLAEH 551
             LS +YA       R  D  +I + M+ D G K +  H
Sbjct: 297 VLLSNMYASEQ----RWSDVQKIRKQMLRD-GVKKVPGH 330



 Score =  115 bits (288), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 91/338 (26%), Positives = 165/338 (48%), Gaps = 38/338 (11%)

Query: 123 DRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMIS 182
           D  +G  +H   I SG+GS ++V  +L+ LY     V SA KVFDKMPEKD V WNS+I+
Sbjct: 3   DVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVIN 62

Query: 183 GLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFH 242
           G  +N   ++++ ++ +M  + G   D  ++ ++L A A++  L LG  +    +K+G  
Sbjct: 63  GFAENGKPEEALALYTEM-NSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLT 121

Query: 243 DHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQL 302
            +++    L+  Y++CG VE A+ LF ++V  + +S  ++I G   NG  + ++ LF+ +
Sbjct: 122 RNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYM 181

Query: 303 LASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEM 362
            ++          GL+P    F  + L  C H   +K G                     
Sbjct: 182 ESTE---------GLLPCEITFVGI-LYACSHCGMVKEG--------------------F 211

Query: 363 EAARKLFDESS-EKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSA 421
           E  R++ +E   E  +  +  M+    + G  ++A   ++ +++  + PN V   ++L A
Sbjct: 212 EYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKA---YEYIKSMPMQPNVVIWRTLLGA 268

Query: 422 CAQLGAISLGKWVH-ELVKSRNFESNIYVSTALIDMYA 458
           C   G   L ++   ++++     S  YV   L +MYA
Sbjct: 269 CTVHGDSDLAEFARIQILQLEPNHSGDYV--LLSNMYA 304



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 63/267 (23%), Positives = 129/267 (48%), Gaps = 3/267 (1%)

Query: 29  HAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNEMP 88
           H+ +I  GF + +     L H  ++      A  +F  +P+ DL  +N +I GF+ N  P
Sbjct: 11  HSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKP 70

Query: 89  KSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAA 148
           + ++  YT +  +  + PD FT   +LSA +     ++G  +H + I  G   +L     
Sbjct: 71  EEALALYTEM-NSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNV 129

Query: 149 LVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWL 208
           L+DLY +   V+ A+ +FD+M +K++V W S+I GL  N   +++I +F  M    G   
Sbjct: 130 LLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLP 189

Query: 209 DSTSVAAVLPAVAEVQELRLGME-IQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELL 267
              +   +L A +    ++ G E  + +  +      +     +V   ++ G+V++A   
Sbjct: 190 CEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEY 249

Query: 268 FRDI-VRPDLISCNAMISGYTCNGKTE 293
            + + ++P+++    ++   T +G ++
Sbjct: 250 IKSMPMQPNVVIWRTLLGACTVHGDSD 276


>gi|356514095|ref|XP_003525742.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g01580-like [Glycine max]
          Length = 700

 Score =  429 bits (1103), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 223/696 (32%), Positives = 387/696 (55%), Gaps = 3/696 (0%)

Query: 7   QSRNLFLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFS 66
           + R+L + LL+   ++  + Q H+Q +  G  +D   VTKL    + + + C+A  LF  
Sbjct: 2   KRRDLLVKLLETCCSKISIPQLHSQCLKVGLAHDSFVVTKLNVLYARYASLCHAHKLFEE 61

Query: 67  IPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKN--TALTPDNFTYSFVLSAASACCDR 124
            P   ++L+N ++R +        ++  +  +  +  T   PDN+T S  L + S     
Sbjct: 62  TPCKTVYLWNALLRSYFLEGKWVETLSLFHQMNADAITEERPDNYTVSIALKSCSGLQKL 121

Query: 125 SIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGL 184
            +G ++HG        +D+FVG+AL++LY K   +  A KVF + P++D VLW S+I+G 
Sbjct: 122 ELGKMIHGFLKKKKIDNDMFVGSALIELYSKCGQMNDAVKVFTEYPKQDVVLWTSIITGY 181

Query: 185 MKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDH 244
            +N   + ++  F  MV       D  ++ +   A A++ +  LG  +     + GF   
Sbjct: 182 EQNGSPELALAFFSRMVVLEQVSPDPVTLVSAASACAQLSDFNLGRSVHGFVKRRGFDTK 241

Query: 245 VYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLA 304
           + +   +++ Y K G +  A  LFR++   D+IS ++M++ Y  NG   ++L LF +++ 
Sbjct: 242 LCLANSILNLYGKTGSIRSAANLFREMPYKDIISWSSMVACYADNGAETNALNLFNEMID 301

Query: 305 SAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEA 364
               +N  T++  +       +L     IH   +  G   + +V TAL  +Y +    + 
Sbjct: 302 KRIELNRVTVISALRACASSSNLEEGKHIHKLAVNYGFELDITVSTALMDMYMKCFSPKN 361

Query: 365 ARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQ 424
           A  LF+   +K + SW  + +GY + G+  +++ +F  M +    P+ + +  IL+A ++
Sbjct: 362 AIDLFNRMPKKDVVSWAVLFSGYAEIGMAHKSLGVFCNMLSYGTRPDAIALVKILAASSE 421

Query: 425 LGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTM 484
           LG +     +H  V    F++N ++  +LI++YAKC +I  A ++F  M  K  VTW+++
Sbjct: 422 LGIVQQALCLHAFVSKSGFDNNEFIGASLIELYAKCSSIDNANKVFKGMRRKDVVTWSSI 481

Query: 485 ISGYGLHGHGLEALQLFSEML-HSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDH 543
           I+ YG HG G EAL+LF +M  HS ++P+ VTF+S+L ACSHAGL+ EG ++F  M++++
Sbjct: 482 IAAYGFHGQGEEALKLFYQMSNHSDVKPNDVTFVSILSACSHAGLIEEGIKMFHVMVNEY 541

Query: 544 GFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVA 603
              P  EHY  MVD+LGR G+L+KAL+ I  + ++ GP VWGALLGAC IH++  +  +A
Sbjct: 542 QLMPNTEHYGIMVDLLGRMGELDKALDMINEMPMQAGPHVWGALLGACRIHQNIKIGELA 601

Query: 604 SEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHV 663
           +  LF LDP + GY+ LLSNIY  ++++  AA +R ++K+ +  K  G +++E+    H 
Sbjct: 602 ALNLFLLDPNHAGYYTLLSNIYCVDKNWHDAAKLRTLIKENRFKKIVGQSMVEIKNEVHS 661

Query: 664 FTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVT 699
           F + D+ H +S  IY ML KL+ +M+E G+     T
Sbjct: 662 FIASDRFHGESDQIYGMLRKLDARMKEEGYDPPVQT 697


>gi|147801010|emb|CAN60118.1| hypothetical protein VITISV_016374 [Vitis vinifera]
          Length = 1166

 Score =  429 bits (1103), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 252/758 (33%), Positives = 415/758 (54%), Gaps = 9/758 (1%)

Query: 27   QTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNE 86
            Q    II +GF++ +S    L    S F +   A  +F  + + D+  +N +I  ++++ 
Sbjct: 318  QVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHG 377

Query: 87   MPKSSI-CFY--THLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDL 143
            + + S+ CF+   HL   T  T    T S +LS  S+  +   G  +HG  +  G  S++
Sbjct: 378  LCRESLRCFHWMRHLHNETNST----TLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNV 433

Query: 144  FVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRN 203
             +   L+ LY +    + A  VF  M E+D + WNSM++  +++    D + +  ++++ 
Sbjct: 434  CICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMACYVQDGKCLDGLKILAELLQM 493

Query: 204  GGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVER 263
            G   ++  + A+ L A +  + L     +  L +  GFHD + V   LV+ Y K G +  
Sbjct: 494  GKV-MNHVTFASALAACSNPECLIESKIVHALIIVAGFHDFLIVGNALVTMYGKLGMMME 552

Query: 264  AELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLI-PVFY 322
            A+ + + + +PD ++ NA+I G+  N +   +++ ++ +       N  T+V ++     
Sbjct: 553  AKKVLQTMPQPDRVTWNALIGGHAENEEPNEAVKAYKLIREKGIPANYITMVSVLGACSA 612

Query: 323  PFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNA 382
            P   L     IH+  + +G  S+  V  +L T+Y++  ++ ++  +FD    KS  +WNA
Sbjct: 613  PDDLLKHGMPIHAHIVLTGFESDDYVKNSLITMYAKCGDLNSSNYIFDGLGNKSPITWNA 672

Query: 383  MIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRN 442
            M+A    +G  EEA+ +F EM+   V  +  + S  L+A A L  +  G+ +H LV    
Sbjct: 673  MVAANAHHGCGEEALKIFGEMRNVGVNLDQFSFSGGLAATANLAVLEEGQQLHGLVIKLG 732

Query: 443  FESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFS 502
            FES+++V+ A +DMY KCG + +  ++     ++S ++WN +IS +  HG   +A + F 
Sbjct: 733  FESDLHVTNAAMDMYGKCGEMHDVLKMLPQPINRSRLSWNILISAFARHGCFQKARETFH 792

Query: 503  EMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRA 562
            EML  G +P  VTF+S+L AC+H GLV EG   + SM  + G  P  EH  C++D+LGR+
Sbjct: 793  EMLKLGPKPDHVTFVSLLSACNHGGLVDEGLAYYDSMTREFGVFPGIEHCVCIIDLLGRS 852

Query: 563  GQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLS 622
            G+L  A  FIK + V P    W +LL AC IH +  LAR  +E L ELDP +   +VL S
Sbjct: 853  GRLSHAEGFIKEMPVPPNDLAWRSLLAACRIHGNLELARKTAEHLLELDPSDDSAYVLYS 912

Query: 623  NIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLE 682
            N+ +    +     +R+ +    + K P C+ +++    H F  G++ HPQ++ I A L 
Sbjct: 913  NVCATSGKWEDVENLRKEMGSNNIKKQPACSWVKLKDKVHSFGMGEKYHPQASRISAKLG 972

Query: 683  KLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLR 742
            +L    +EAG+  +T  ALHD++EE+KE  +  HSE+LA+AFGLI T   + +RI KNLR
Sbjct: 973  ELMKMTKEAGYVPDTSFALHDMDEEQKEYNLWNHSERLALAFGLINTPESSTLRIFKNLR 1032

Query: 743  VCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSC 780
            VC DCH+  KF+S + GR IV+RD  RFHHF GG CSC
Sbjct: 1033 VCGDCHSVYKFVSGIVGRKIVLRDPYRFHHFSGGKCSC 1070



 Score =  232 bits (592), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 164/599 (27%), Positives = 296/599 (49%), Gaps = 7/599 (1%)

Query: 27  QTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNE 86
           Q H  ++  G   D+   T L H          A+ LF  +P  ++  +  ++ G+S++ 
Sbjct: 217 QVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSG 276

Query: 87  MPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVG 146
            P   +  Y  +R+   ++ +  T++ V S+     D+ +G  + GH I  G+   + V 
Sbjct: 277 NPGEVLNVYQRMRQE-GVSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVA 335

Query: 147 AALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGT 206
            +L+ ++  FS V+ A  VFD M E D + WN+MIS    +   ++S+  F  M R+   
Sbjct: 336 NSLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWM-RHLHN 394

Query: 207 WLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAEL 266
             +ST+++++L   + V  L+ G  I  L +KLG   +V +   L++ YS+ G  E AEL
Sbjct: 395 ETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAEL 454

Query: 267 LFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGH 326
           +F+ +   DLIS N+M++ Y  +GK    L++  +LL   + +N  T    +        
Sbjct: 455 VFQAMTERDLISWNSMMACYVQDGKCLDGLKILAELLQMGKVMNHVTFASALAACSNPEC 514

Query: 327 LHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAG 386
           L  +  +H+  + +G      V  AL T+Y +L  M  A+K+     +    +WNA+I G
Sbjct: 515 LIESKIVHALIIVAGFHDFLIVGNALVTMYGKLGMMMEAKKVLQTMPQPDRVTWNALIGG 574

Query: 387 YTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSAC-AQLGAISLGKWVHELVKSRNFES 445
           + +N    EA+  ++ ++   +  N +T+ S+L AC A    +  G  +H  +    FES
Sbjct: 575 HAENEEPNEAVKAYKLIREKGIPANYITMVSVLGACSAPDDLLKHGMPIHAHIVLTGFES 634

Query: 446 NIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEML 505
           + YV  +LI MYAKCG++  +  +FD + +KS +TWN M++    HG G EAL++F EM 
Sbjct: 635 DDYVKNSLITMYAKCGDLNSSNYIFDGLGNKSPITWNAMVAANAHHGCGEEALKIFGEMR 694

Query: 506 HSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQL 565
           + G+     +F   L A ++  ++ EG ++   ++   GF+         +D+ G+ G++
Sbjct: 695 NVGVNLDQFSFSGGLAATANLAVLEEGQQL-HGLVIKLGFESDLHVTNAAMDMYGKCGEM 753

Query: 566 EKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFEL--DPENVGYHVLLS 622
              L+ +    +      W  L+ A   H     AR    ++ +L   P++V +  LLS
Sbjct: 754 HDVLKMLP-QPINRSRLSWNILISAFARHGCFQKARETFHEMLKLGPKPDHVTFVSLLS 811



 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 154/572 (26%), Positives = 265/572 (46%), Gaps = 14/572 (2%)

Query: 29  HAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNEMP 88
           HA  I+      +     L +  S F    +AR +F  +   +   ++ ++ G+    + 
Sbjct: 117 HAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVFDEMRHRNEASWSTMLSGYVRVGLY 176

Query: 89  KSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRS-----IGVLLHGHAIVSGYGSDL 143
           + ++  +  +     + P+ F  + +++A    C RS      G  +HG  + +G   D+
Sbjct: 177 EEAVGLFCQMW-GLGVEPNGFMVASLITA----CSRSGYMADEGFQVHGFVVKTGILGDV 231

Query: 144 FVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRN 203
           +VG ALV  Y     V +A+K+F++MP+ + V W S++ G   +    + + V+  M R 
Sbjct: 232 YVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRM-RQ 290

Query: 204 GGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVER 263
            G   +  + A V  +   +++  LG ++    ++ GF D V V   L+S +S    VE 
Sbjct: 291 EGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEE 350

Query: 264 AELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYP 323
           A  +F  +   D+IS NAMIS Y  +G    SLR F  +       NS+T+  L+ V   
Sbjct: 351 ACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLLSVCSS 410

Query: 324 FGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAM 383
             +L     IH   +K G+ SN  +   L T+YS     E A  +F   +E+ L SWN+M
Sbjct: 411 VDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSM 470

Query: 384 IAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNF 443
           +A Y Q+G   + + +  E+       N VT +S L+AC+    +   K VH L+    F
Sbjct: 471 MACYVQDGKCLDGLKILAELLQMGKVMNHVTFASALAACSNPECLIESKIVHALIIVAGF 530

Query: 444 ESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSE 503
              + V  AL+ MY K G ++EA+++   M     VTWN +I G+  +    EA++ +  
Sbjct: 531 HDFLIVGNALVTMYGKLGMMMEAKKVLQTMPQPDRVTWNALIGGHAENEEPNEAVKAYKL 590

Query: 504 MLHSGIRPSGVTFLSVLYACSHA-GLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRA 562
           +   GI  + +T +SVL ACS    L++ G  I   ++   GF+        ++ +  + 
Sbjct: 591 IREKGIPANYITMVSVLGACSAPDDLLKHGMPIHAHIVLT-GFESDDYVKNSLITMYAKC 649

Query: 563 GQLEKALEFIKGLAVEPGPAVWGALLGACMIH 594
           G L  +     GL     P  W A++ A   H
Sbjct: 650 GDLNSSNYIFDGLG-NKSPITWNAMVAANAHH 680



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 137/524 (26%), Positives = 256/524 (48%), Gaps = 5/524 (0%)

Query: 112 SFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPE 171
           +F L   S    +  G  LH   IV      +F    L+++Y KF  ++ AR VFD+M  
Sbjct: 98  NFPLKGFSEITSQMAGKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVFDEMRH 157

Query: 172 KDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQEL-RLGM 230
           ++   W++M+SG ++   +++++ +F  M    G   +   VA+++ A +    +   G 
Sbjct: 158 RNEASWSTMLSGYVRVGLYEEAVGLFCQM-WGLGVEPNGFMVASLITACSRSGYMADEGF 216

Query: 231 EIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNG 290
           ++    +K G    VYV T LV FY   G V  A+ LF ++   +++S  +++ GY+ +G
Sbjct: 217 QVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSG 276

Query: 291 KTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLT 350
                L +++++       N +T   +           L   +    ++ G   + SV  
Sbjct: 277 NPGEVLNVYQRMRQEGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVAN 336

Query: 351 ALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAP 410
           +L +++S  + +E A  +FD  +E  + SWNAMI+ Y  +GL  E++  F  M+      
Sbjct: 337 SLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRHLHNET 396

Query: 411 NPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELF 470
           N  T+SS+LS C+ +  +  G+ +H LV     +SN+ +   L+ +Y++ G   +A  +F
Sbjct: 397 NSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVF 456

Query: 471 DLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVR 530
             M+ +  ++WN+M++ Y   G  L+ L++ +E+L  G   + VTF S L ACS+   + 
Sbjct: 457 QAMTERDLISWNSMMACYVQDGKCLDGLKILAELLQMGKVMNHVTFASALAACSNPECLI 516

Query: 531 EGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGA 590
           E  +I  ++I   GF         +V + G+ G + +A + ++ +  +P    W AL+G 
Sbjct: 517 E-SKIVHALIIVAGFHDFLIVGNALVTMYGKLGMMMEAKKVLQTMP-QPDRVTWNALIGG 574

Query: 591 CMIHKDTNLARVASEKLFELD-PENVGYHVLLSNIYSAERDYLQ 633
              +++ N A  A + + E   P N    V +    SA  D L+
Sbjct: 575 HAENEEPNEAVKAYKLIREKGIPANYITMVSVLGACSAPDDLLK 618


>gi|224091072|ref|XP_002309169.1| predicted protein [Populus trichocarpa]
 gi|222855145|gb|EEE92692.1| predicted protein [Populus trichocarpa]
          Length = 619

 Score =  429 bits (1103), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 234/586 (39%), Positives = 318/586 (54%), Gaps = 38/586 (6%)

Query: 237 LKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSL 296
           L+LG  +  Y+L  ++ F    G    +  +F     P++   N MI G   N   + S+
Sbjct: 34  LRLGLDEDSYLLNKVLRFSFNFGNTNYSHRIFHQTKEPNIFLFNTMIHGLVLNDSFQESI 93

Query: 297 RLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVY 356
            ++  +       +S T   L+          L   +H   +K+G  S++ V T+L ++Y
Sbjct: 94  EIYHSMRKEGLSPDSFTFPFLLKACARLLDSKLGIKLHGLVVKAGCESDAFVNTSLVSLY 153

Query: 357 SRLNEMEAARKLFDESSEKSLA-------------------------------------- 378
            +   ++ A K+FD+  EK++A                                      
Sbjct: 154 GKCGFIDNAFKVFDDIPEKNVAAWTAIISGYIGVGKCREAIDMFRRACSVFDGMLEKDIV 213

Query: 379 SWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELV 438
           SW++MI GY  NGL +EA+ LF +M      P+   +  +L ACA+LGA+ LG W   L+
Sbjct: 214 SWSSMIQGYASNGLPKEALDLFFKMLNEGFRPDCYAMVGVLCACARLGALELGNWASNLM 273

Query: 439 KSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEAL 498
               F  N  + TALIDMYAKCG +  A E+F  M  K  V WN  ISG  + GH   A 
Sbjct: 274 DRNEFLGNPVLGTALIDMYAKCGRMDSAWEVFRGMRKKDIVVWNAAISGLAMSGHVKAAF 333

Query: 499 QLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDI 558
            LF +M  SGI P G TF+ +L AC+HAGLV EG + F SM       P  EHY CMVD+
Sbjct: 334 GLFGQMEKSGIEPDGNTFVGLLCACTHAGLVDEGRQYFNSMERVFTLTPEIEHYGCMVDL 393

Query: 559 LGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYH 618
           LGRAG L++A + +K + +E    VWGALLG C +H+DT L     ++L  L+P N G +
Sbjct: 394 LGRAGFLDEAHQLVKSMPMEANAIVWGALLGGCRLHRDTQLVEGVLKQLIALEPSNSGNY 453

Query: 619 VLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIY 678
           VLLSNIYSA   +  AA +R ++ +R + K PG + IEV G  H F  GD  HP S  IY
Sbjct: 454 VLLSNIYSASHKWEDAAKIRSIMSERGIKKVPGYSWIEVDGVVHEFLVGDTSHPLSEKIY 513

Query: 679 AMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRII 738
           A L +L   ++ +G+   T   L D+EEEEKE  +  HSEKLAIAFGLI+T P  +IR++
Sbjct: 514 AKLGELVKDLKASGYVPTTDYVLFDIEEEEKEHFIGCHSEKLAIAFGLISTAPNDKIRVV 573

Query: 739 KNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           KNLRVC DCH A K IS+ TGR I+VRD NRFH F  G CSC DYW
Sbjct: 574 KNLRVCGDCHEAIKHISRFTGREIIVRDNNRFHCFNDGSCSCKDYW 619



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 104/355 (29%), Positives = 169/355 (47%), Gaps = 40/355 (11%)

Query: 2   SMKTPQSRNLFLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYAR 61
           S+   +S ++ + L +G  +   L   HA ++  G   D   + K+     +F  T Y+ 
Sbjct: 3   SLILNKSAHIKIRLFQGFNSLKHLKHVHAALLRLGLDEDSYLLNKVLRFSFNFGNTNYSH 62

Query: 62  ALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASAC 121
            +F    +P++FLFN +I G   N+  + SI  Y  +RK   L+PD+FT+ F+L A +  
Sbjct: 63  RIFHQTKEPNIFLFNTMIHGLVLNDSFQESIEIYHSMRKE-GLSPDSFTFPFLLKACARL 121

Query: 122 CDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMP----------- 170
            D  +G+ LHG  + +G  SD FV  +LV LY K  ++ +A KVFD +P           
Sbjct: 122 LDSKLGIKLHGLVVKAGCESDAFVNTSLVSLYGKCGFIDNAFKVFDDIPEKNVAAWTAII 181

Query: 171 ---------------------------EKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRN 203
                                      EKD V W+SMI G   N   ++++ +F  M+ N
Sbjct: 182 SGYIGVGKCREAIDMFRRACSVFDGMLEKDIVSWSSMIQGYASNGLPKEALDLFFKML-N 240

Query: 204 GGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVER 263
            G   D  ++  VL A A +  L LG     L  +  F  +  + T L+  Y+KCG ++ 
Sbjct: 241 EGFRPDCYAMVGVLCACARLGALELGNWASNLMDRNEFLGNPVLGTALIDMYAKCGRMDS 300

Query: 264 AELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLI 318
           A  +FR + + D++  NA ISG   +G  +++  LF Q+  S    + +T VGL+
Sbjct: 301 AWEVFRGMRKKDIVVWNAAISGLAMSGHVKAAFGLFGQMEKSGIEPDGNTFVGLL 355



 Score =  145 bits (366), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 117/473 (24%), Positives = 209/473 (44%), Gaps = 53/473 (11%)

Query: 130 LHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCC 189
           +H   +  G   D ++   ++   F F     + ++F +  E +  L+N+MI GL+ N  
Sbjct: 29  VHAALLRLGLDEDSYLLNKVLRFSFNFGNTNYSHRIFHQTKEPNIFLFNTMIHGLVLNDS 88

Query: 190 FQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLT 249
           FQ+SI ++  M R  G   DS +   +L A A + + +LG+++  L +K G     +V T
Sbjct: 89  FQESIEIYHSM-RKEGLSPDSFTFPFLLKACARLLDSKLGIKLHGLVVKAGCESDAFVNT 147

Query: 250 GLVSFYSKCGEVERAELLFRDI-------------------------------------- 271
            LVS Y KCG ++ A  +F DI                                      
Sbjct: 148 SLVSLYGKCGFIDNAFKVFDDIPEKNVAAWTAIISGYIGVGKCREAIDMFRRACSVFDGM 207

Query: 272 VRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTN 331
           +  D++S ++MI GY  NG  + +L LF ++L    R +   +VG++      G L L N
Sbjct: 208 LEKDIVSWSSMIQGYASNGLPKEALDLFFKMLNEGFRPDCYAMVGVLCACARLGALELGN 267

Query: 332 CIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNG 391
              +   ++  + N  + TAL  +Y++   M++A ++F    +K +  WNA I+G   +G
Sbjct: 268 WASNLMDRNEFLGNPVLGTALIDMYAKCGRMDSAWEVFRGMRKKDIVVWNAAISGLAMSG 327

Query: 392 LTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGK-WVHELVKSRNFESNIYVS 450
             + A  LF +M+ S + P+  T   +L AC   G +  G+ + + + +       I   
Sbjct: 328 HVKAAFGLFGQMEKSGIEPDGNTFVGLLCACTHAGLVDEGRQYFNSMERVFTLTPEIEHY 387

Query: 451 TALIDMYAKCGNIVEARELFDLMSHKSE-VTWNTMISGYGLHGHGLEALQLFSEMLHS-- 507
             ++D+  + G + EA +L   M  ++  + W  ++ G  LH       QL   +L    
Sbjct: 388 GCMVDLLGRAGFLDEAHQLVKSMPMEANAIVWGALLGGCRLH----RDTQLVEGVLKQLI 443

Query: 508 GIRPS---GVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVD 557
            + PS       LS +Y+ SH     E     +S++ + G K +  +    VD
Sbjct: 444 ALEPSNSGNYVLLSNIYSASHK---WEDAAKIRSIMSERGIKKVPGYSWIEVD 493



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 80/307 (26%), Positives = 138/307 (44%), Gaps = 40/307 (13%)

Query: 318 IPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSL 377
           I +F  F  L     +H+  L+ G+  +S +L  +            + ++F ++ E ++
Sbjct: 14  IRLFQGFNSLKHLKHVHAALLRLGLDEDSYLLNKVLRFSFNFGNTNYSHRIFHQTKEPNI 73

Query: 378 ASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHEL 437
             +N MI G   N   +E+I ++  M+   ++P+  T   +L ACA+L    LG  +H L
Sbjct: 74  FLFNTMIHGLVLNDSFQESIEIYHSMRKEGLSPDSFTFPFLLKACARLLDSKLGIKLHGL 133

Query: 438 VKSRNFESNIYVSTALIDMYAKCGNIVEA----------------------------RE- 468
           V     ES+ +V+T+L+ +Y KCG I  A                            RE 
Sbjct: 134 VVKAGCESDAFVNTSLVSLYGKCGFIDNAFKVFDDIPEKNVAAWTAIISGYIGVGKCREA 193

Query: 469 ---------LFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSV 519
                    +FD M  K  V+W++MI GY  +G   EAL LF +ML+ G RP     + V
Sbjct: 194 IDMFRRACSVFDGMLEKDIVSWSSMIQGYASNGLPKEALDLFFKMLNEGFRPDCYAMVGV 253

Query: 520 LYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEP 579
           L AC+  G +  G+    +++  + F         ++D+  + G+++ A E  +G+  + 
Sbjct: 254 LCACARLGALELGNWA-SNLMDRNEFLGNPVLGTALIDMYAKCGRMDSAWEVFRGMR-KK 311

Query: 580 GPAVWGA 586
              VW A
Sbjct: 312 DIVVWNA 318


>gi|356514087|ref|XP_003525738.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g01580-like [Glycine max]
          Length = 701

 Score =  429 bits (1102), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 226/696 (32%), Positives = 390/696 (56%), Gaps = 4/696 (0%)

Query: 7   QSRNLFLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFS 66
           + R+L + LL+   ++  +TQ H+Q +  G   D   VTKL    + + + C+A  LF  
Sbjct: 2   KRRDLLVKLLETCCSKISITQLHSQCLKVGLALDSFVVTKLNVLYARYASLCHAHKLFEE 61

Query: 67  IPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKN--TALTPDNFTYSFVLSAASACCDR 124
            P   ++L+N ++R +        ++  +  +  +  T   PDN+T S  L + S     
Sbjct: 62  TPCKTVYLWNALLRSYFLEGKWVETLSLFHQMNADAVTEERPDNYTVSIALKSCSGLQKL 121

Query: 125 SIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGL 184
            +G ++HG  +     SD+FVG+AL++LY K   +  A KVF + P+ D VLW S+I+G 
Sbjct: 122 ELGKMIHGF-LKKKIDSDMFVGSALIELYSKCGQMNDAVKVFTEYPKPDVVLWTSIITGY 180

Query: 185 MKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDH 244
            +N   + ++  F  MV       D  ++ +   A A++ +  LG  +     + GF   
Sbjct: 181 EQNGSPELALAFFSRMVVLEQVSPDPVTLVSAASACAQLSDFNLGRSVHGFVKRRGFDTK 240

Query: 245 VYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLA 304
           + +   +++ Y K G +  A  LFR++   D+IS ++M++ Y  NG   ++L LF +++ 
Sbjct: 241 LCLANSILNLYGKTGSIRIAANLFREMPYKDIISWSSMVACYADNGAETNALNLFNEMID 300

Query: 305 SAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEA 364
               +N  T++  +       +L     IH   +  G   + +V TAL  +Y +    E 
Sbjct: 301 KRIELNRVTVISALRACASSSNLEEGKQIHKLAVNYGFELDITVSTALMDMYLKCFSPEN 360

Query: 365 ARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQ 424
           A +LF+   +K + SW  + +GY + G+  +++ +F  M ++   P+ + +  IL+A ++
Sbjct: 361 AIELFNRMPKKDVVSWAVLFSGYAEIGMAHKSLGVFCNMLSNGTRPDAIALVKILAASSE 420

Query: 425 LGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTM 484
           LG +     +H  V    F++N ++  +LI++YAKC +I  A ++F  + H   VTW+++
Sbjct: 421 LGIVQQALCLHAFVTKSGFDNNEFIGASLIELYAKCSSIDNANKVFKGLRHTDVVTWSSI 480

Query: 485 ISGYGLHGHGLEALQLFSEML-HSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDH 543
           I+ YG HG G EAL+L  +M  HS ++P+ VTF+S+L ACSHAGL+ EG ++F  M++++
Sbjct: 481 IAAYGFHGQGEEALKLSHQMSNHSDVKPNDVTFVSILSACSHAGLIEEGIKMFHVMVNEY 540

Query: 544 GFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVA 603
              P  EHY  MVD+LGR G+L+KAL+ I  + ++ GP VWGALLGAC IH++  +  +A
Sbjct: 541 QLMPNIEHYGIMVDLLGRMGELDKALDMINNMPMQAGPHVWGALLGACRIHQNIKIGELA 600

Query: 604 SEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHV 663
           +  LF LDP + GY+ LLSNIY  ++++  AA +R ++K+ +L K  G +++E+    H 
Sbjct: 601 ALNLFLLDPNHAGYYTLLSNIYCVDKNWHDAAKLRTLIKENRLKKIVGQSMVEIKNEVHS 660

Query: 664 FTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVT 699
           F + D+ H +S  IY ML KL+ +MRE G+  +  T
Sbjct: 661 FIASDRFHGESDQIYEMLRKLDARMREEGYDPDLQT 696


>gi|224071204|ref|XP_002303374.1| predicted protein [Populus trichocarpa]
 gi|222840806|gb|EEE78353.1| predicted protein [Populus trichocarpa]
          Length = 569

 Score =  429 bits (1102), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 234/554 (42%), Positives = 331/554 (59%), Gaps = 9/554 (1%)

Query: 231 EIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNG 290
           E Q L +K+   D V   T ++S Y +   +ERA+  F D+   D  S N MI+G+  N 
Sbjct: 25  EAQELFVKIPEPDAVSYNT-MLSCYVRNSNMERAQAFFEDMPIKDTPSWNTMITGFAQNQ 83

Query: 291 KTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLT 350
           + + +  LF  +       N  T   +I  +   G L     +        +V+     T
Sbjct: 84  QMDKARDLFLIMPTK----NVVTWNAMISGYVECGDLDSALKLFEKAPFKSVVA----WT 135

Query: 351 ALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAP 410
           A+ T Y +L  +  A +LF++  EK+L +WNAMIAGY +N   E+ + LF+ M    + P
Sbjct: 136 AMITGYMKLGRIGLAERLFEKMPEKNLVTWNAMIAGYIENHRAEDGVKLFRTMVGFGIQP 195

Query: 411 NPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELF 470
           N  T+SS L  C++L A+ LG+ VH+LV       +    T+LI MY KCG + +  +LF
Sbjct: 196 NSSTLSSALLGCSELSALQLGRQVHQLVCKSPLCDDTTAGTSLISMYCKCGVLEDGWKLF 255

Query: 471 DLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVR 530
             +  +  VTWN MISGY  HG G +AL LF EM+  G++P  +TF++VL AC+HAG   
Sbjct: 256 VQVPRRDVVTWNAMISGYAQHGEGKKALGLFDEMIEKGMKPDWITFVAVLMACNHAGFTD 315

Query: 531 EGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGA 590
            G + F SM  D+G     +HY CMVD+LGRAG+L +A++ I+ +  +P  AV+G LLGA
Sbjct: 316 LGVKYFHSMAKDYGLVAKPDHYTCMVDLLGRAGKLVEAVDLIEKMPFKPHAAVFGTLLGA 375

Query: 591 CMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAP 650
           C IHK+T +A  AS+KL  LDP +   +V L+N+Y+A + +   A VR+ +K  K+ K P
Sbjct: 376 CRIHKNTEMAEFASQKLLNLDPASATGYVQLANVYAATKRWDHVARVRKSMKSCKVVKTP 435

Query: 651 GCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKE 710
           G + IEV    H F SGD+ HP+  +I+  L++L  KM+ AG+  +   ALHDV EE+KE
Sbjct: 436 GYSWIEVKSMAHQFRSGDKFHPELASIHGKLKELEKKMKLAGYVPDLEFALHDVGEEQKE 495

Query: 711 LMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRF 770
            ++  HSEKLAIA+GLI   PGT IR+ KNLRVC DCH A K+IS++  R I+VRD  RF
Sbjct: 496 QLLLWHSEKLAIAYGLIKLPPGTPIRVFKNLRVCGDCHRAIKYISQIERREIIVRDTTRF 555

Query: 771 HHFKGGVCSCGDYW 784
           HHFK G CSC DYW
Sbjct: 556 HHFKDGHCSCADYW 569



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 94/330 (28%), Positives = 165/330 (50%), Gaps = 12/330 (3%)

Query: 149 LVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDM-VRNGGTW 207
           ++  Y + S ++ A+  F+ MP KDT  WN+MI+G  +N     +  +F  M  +N  TW
Sbjct: 44  MLSCYVRNSNMERAQAFFEDMPIKDTPSWNTMITGFAQNQQMDKARDLFLIMPTKNVVTW 103

Query: 208 LDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELL 267
                  A++    E  +L   +++     +      V   T +++ Y K G +  AE L
Sbjct: 104 ------NAMISGYVECGDLDSALKL----FEKAPFKSVVAWTAMITGYMKLGRIGLAERL 153

Query: 268 FRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHL 327
           F  +   +L++ NAMI+GY  N + E  ++LFR ++    + NSST+   +        L
Sbjct: 154 FEKMPEKNLVTWNAMIAGYIENHRAEDGVKLFRTMVGFGIQPNSSTLSSALLGCSELSAL 213

Query: 328 HLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGY 387
            L   +H    KS +  +++  T+L ++Y +   +E   KLF +   + + +WNAMI+GY
Sbjct: 214 QLGRQVHQLVCKSPLCDDTTAGTSLISMYCKCGVLEDGWKLFVQVPRRDVVTWNAMISGY 273

Query: 388 TQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLG-KWVHELVKSRNFESN 446
            Q+G  ++A+ LF EM    + P+ +T  ++L AC   G   LG K+ H + K     + 
Sbjct: 274 AQHGEGKKALGLFDEMIEKGMKPDWITFVAVLMACNHAGFTDLGVKYFHSMAKDYGLVAK 333

Query: 447 IYVSTALIDMYAKCGNIVEARELFDLMSHK 476
               T ++D+  + G +VEA +L + M  K
Sbjct: 334 PDHYTCMVDLLGRAGKLVEAVDLIEKMPFK 363



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 89/322 (27%), Positives = 153/322 (47%), Gaps = 13/322 (4%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNE-MPKSSICFYTHLRKNTALTPDNFTYSFVLSAA 118
           A+A F  +P  D   +N +I GF+ N+ M K+   F     KN        T++ ++S  
Sbjct: 57  AQAFFEDMPIKDTPSWNTMITGFAQNQQMDKARDLFLIMPTKNVV------TWNAMISGY 110

Query: 119 SACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWN 178
             C D    + L   A        +    A++  Y K   +  A ++F+KMPEK+ V WN
Sbjct: 111 VECGDLDSALKLFEKAPFKS----VVAWTAMITGYMKLGRIGLAERLFEKMPEKNLVTWN 166

Query: 179 SMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLK 238
           +MI+G ++N   +D + +F  MV   G   +S+++++ L   +E+  L+LG ++  L  K
Sbjct: 167 AMIAGYIENHRAEDGVKLFRTMV-GFGIQPNSSTLSSALLGCSELSALQLGRQVHQLVCK 225

Query: 239 LGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRL 298
               D     T L+S Y KCG +E    LF  + R D+++ NAMISGY  +G+ + +L L
Sbjct: 226 SPLCDDTTAGTSLISMYCKCGVLEDGWKLFVQVPRRDVVTWNAMISGYAQHGEGKKALGL 285

Query: 299 FRQLLASAERVNSSTIVGLIPVFYPFGHLHL-TNCIHSFCLKSGIVSNSSVLTALSTVYS 357
           F +++    + +  T V ++      G   L     HS     G+V+     T +  +  
Sbjct: 286 FDEMIEKGMKPDWITFVAVLMACNHAGFTDLGVKYFHSMAKDYGLVAKPDHYTCMVDLLG 345

Query: 358 RLNEMEAARKLFDESSEKSLAS 379
           R  ++  A  L ++   K  A+
Sbjct: 346 RAGKLVEAVDLIEKMPFKPHAA 367



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 66/227 (29%), Positives = 106/227 (46%), Gaps = 35/227 (15%)

Query: 338 LKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAI 397
           LK+ +  NS VL  +S    +L E   A++LF +  E    S+N M++ Y +N   E A 
Sbjct: 3   LKTTVTWNS-VLAGMSKKRGKLKE---AQELFVKIPEPDAVSYNTMLSCYVRNSNMERAQ 58

Query: 398 SLFQEM-------------------QASK------VAP--NPVTVSSILSACAQLGAISL 430
           + F++M                   Q  K      + P  N VT ++++S   + G +  
Sbjct: 59  AFFEDMPIKDTPSWNTMITGFAQNQQMDKARDLFLIMPTKNVVTWNAMISGYVECGDLDS 118

Query: 431 GKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGL 490
                +L +   F+S +   TA+I  Y K G I  A  LF+ M  K+ VTWN MI+GY  
Sbjct: 119 AL---KLFEKAPFKS-VVAWTAMITGYMKLGRIGLAERLFEKMPEKNLVTWNAMIAGYIE 174

Query: 491 HGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQ 537
           +    + ++LF  M+  GI+P+  T  S L  CS    ++ G ++ Q
Sbjct: 175 NHRAEDGVKLFRTMVGFGIQPNSSTLSSALLGCSELSALQLGRQVHQ 221


>gi|225434804|ref|XP_002280428.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic [Vitis vinifera]
          Length = 658

 Score =  429 bits (1102), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 224/545 (41%), Positives = 342/545 (62%), Gaps = 6/545 (1%)

Query: 246 YVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLL-- 303
           ++ T L++ YS+   ++ A  +F    +  +   NA+    T  G     L L+R++   
Sbjct: 114 FLATKLINMYSELDSIDNARKVFDKTRKRTIYVWNALFRALTLAGYGREVLDLYRRMNRI 173

Query: 304 -ASAERVNSSTIVGLIPVFYPFGHLHLTNC-IHSFCLKSGIVSNSSVLTALSTVYSRLNE 361
              ++R   + ++        F  L L    IH   L+ G   +  ++T L  +Y+R   
Sbjct: 174 GVPSDRFTYTYVLKACVASEAFVSLLLNGREIHGHILRHGFEGHVHIMTTLLDMYARFGC 233

Query: 362 MEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEM--QASKVAPNPVTVSSIL 419
           +  A ++FD+   K++ SW+AMIA Y++NG   EA+ LF++M  +   + PN VT+ S+L
Sbjct: 234 VLNASRVFDQMPVKNVVSWSAMIACYSKNGKPLEALELFRKMMLENQDLLPNSVTMVSVL 293

Query: 420 SACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEV 479
            ACA L A+  GK +H  +  R  +S + V +AL+ +YA+CGN+     +F+ M  +  V
Sbjct: 294 QACAALAALEQGKLMHGYILRRGLDSILPVVSALVTVYARCGNLELGHRVFERMEKRDVV 353

Query: 480 TWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSM 539
           +WN++IS YG+HG G +A+Q+F EM+  G+ PS ++F+SVL ACSHAGLV EG  +F+SM
Sbjct: 354 SWNSLISSYGIHGFGRKAIQIFKEMIDQGLSPSPISFVSVLGACSHAGLVEEGKVLFESM 413

Query: 540 IHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNL 599
           +  H   P  EHYACMVD+LGRA +L++A + I  + +EPGP VWG+LLG+C IH +  L
Sbjct: 414 VRGHKIFPSVEHYACMVDLLGRANRLDEAAKIIDDMRIEPGPKVWGSLLGSCRIHCNVEL 473

Query: 600 ARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGG 659
           A  A+ +LFEL+P N G +VLL++IY+  + + +   V+ +++ R L K PG + IE+  
Sbjct: 474 AERATSRLFELEPTNAGNYVLLADIYAEAKMWNEVKRVKMLLEARGLQKVPGRSCIEIRR 533

Query: 660 TPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEK 719
             + F S D+ +PQ   ++A+L KL+ +M+E G+  +T   L+D++ EEKE ++  HSEK
Sbjct: 534 KIYSFMSVDEFNPQIEQLHALLLKLSMEMKEKGYVPDTKVVLYDLDPEEKERIVLGHSEK 593

Query: 720 LAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCS 779
           LA+AFGLI ++ G  IRI KNLR+C DCH+ TKFISK   R I+VRD NRFH F+ GVCS
Sbjct: 594 LALAFGLINSKKGETIRITKNLRLCEDCHSVTKFISKFANREILVRDVNRFHLFQDGVCS 653

Query: 780 CGDYW 784
           CGDYW
Sbjct: 654 CGDYW 658



 Score =  119 bits (297), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 79/271 (29%), Positives = 141/271 (52%), Gaps = 14/271 (5%)

Query: 333 IHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGL 392
           +H   +  G   +  + T L  +YS L+ ++ ARK+FD++ ++++  WNA+    T  G 
Sbjct: 100 LHRHLIHDGSDQDPFLATKLINMYSELDSIDNARKVFDKTRKRTIYVWNALFRALTLAGY 159

Query: 393 TEEAISLFQEMQASKVAPNPVTVSSILSAC-AQLGAISL---GKWVHELVKSRNFESNIY 448
             E + L++ M    V  +  T + +L AC A    +SL   G+ +H  +    FE +++
Sbjct: 160 GREVLDLYRRMNRIGVPSDRFTYTYVLKACVASEAFVSLLLNGREIHGHILRHGFEGHVH 219

Query: 449 VSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEML--H 506
           + T L+DMYA+ G ++ A  +FD M  K+ V+W+ MI+ Y  +G  LEAL+LF +M+  +
Sbjct: 220 IMTTLLDMYARFGCVLNASRVFDQMPVKNVVSWSAMIACYSKNGKPLEALELFRKMMLEN 279

Query: 507 SGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLE 566
             + P+ VT +SVL AC+    + +G ++    I   G   +    + +V +  R G LE
Sbjct: 280 QDLLPNSVTMVSVLQACAALAALEQG-KLMHGYILRRGLDSILPVVSALVTVYARCGNLE 338

Query: 567 ---KALEFIKGLAVEPGPAVWGALLGACMIH 594
              +  E ++   V      W +L+ +  IH
Sbjct: 339 LGHRVFERMEKRDV----VSWNSLISSYGIH 365



 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 115/471 (24%), Positives = 212/471 (45%), Gaps = 51/471 (10%)

Query: 1   MSMKTPQSRNLFLSLLKGAKTQSQLTQ---THAQIIIHGFQNDLSTVTKLAHRLSDFKAT 57
           +S +   +++ +  L+     Q+ L Q    H  +I  G   D    TKL +  S+  + 
Sbjct: 70  LSQEPNPTQHTYELLILSCTRQNSLPQGIDLHRHLIHDGSDQDPFLATKLINMYSELDSI 129

Query: 58  CYARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSA 117
             AR +F    K  ++++N + R  +     +  +  Y  + +   +  D FTY++VL A
Sbjct: 130 DNARKVFDKTRKRTIYVWNALFRALTLAGYGREVLDLYRRMNR-IGVPSDRFTYTYVLKA 188

Query: 118 ASACCDRSIGVLL-----HGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEK 172
             A  +  + +LL     HGH +  G+   + +   L+D+Y +F  V +A +VFD+MP K
Sbjct: 189 CVAS-EAFVSLLLNGREIHGHILRHGFEGHVHIMTTLLDMYARFGCVLNASRVFDQMPVK 247

Query: 173 DTVLWNSMISGLMKNCCFQDSIWVFGDM-VRNGGTWLDSTSVAAVLPAVAEVQELRLGME 231
           + V W++MI+   KN    +++ +F  M + N     +S ++ +VL A A +  L  G  
Sbjct: 248 NVVSWSAMIACYSKNGKPLEALELFRKMMLENQDLLPNSVTMVSVLQACAALAALEQGKL 307

Query: 232 IQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGK 291
           +    L+ G    + V++ LV+ Y++CG +E    +F  + + D++S N++IS Y  +G 
Sbjct: 308 MHGYILRRGLDSILPVVSALVTVYARCGNLELGHRVFERMEKRDVVSWNSLISSYGIHGF 367

Query: 292 TESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTA 351
              ++++F++++            GL P    F  + L  C H     +G+V    VL  
Sbjct: 368 GRKAIQIFKEMIDQ----------GLSPSPISFVSV-LGACSH-----AGLVEEGKVL-- 409

Query: 352 LSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPN 411
                     M    K+F      S+  +  M+    +    +EA  +  +M   ++ P 
Sbjct: 410 -------FESMVRGHKIF-----PSVEHYACMVDLLGRANRLDEAAKIIDDM---RIEPG 454

Query: 412 PVTVSSILSACAQLGAISLGKWVHELVKSRNFE---SNIYVSTALIDMYAK 459
           P    S+L +C     + L     E   SR FE   +N      L D+YA+
Sbjct: 455 PKVWGSLLGSCRIHCNVELA----ERATSRLFELEPTNAGNYVLLADIYAE 501



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 54/217 (24%), Positives = 97/217 (44%), Gaps = 15/217 (6%)

Query: 381 NAMIAGYTQNGLTEEAISLFQEMQASKVAPNPV--TVSSILSACAQLGAISLGKWVHELV 438
           N +I    + G      +L Q +Q     PNP   T   ++ +C +  ++  G  +H  +
Sbjct: 51  NPLIQSLCKQG------NLNQALQVLSQEPNPTQHTYELLILSCTRQNSLPQGIDLHRHL 104

Query: 439 KSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEAL 498
                + + +++T LI+MY++  +I  AR++FD    ++   WN +     L G+G E L
Sbjct: 105 IHDGSDQDPFLATKLINMYSELDSIDNARKVFDKTRKRTIYVWNALFRALTLAGYGREVL 164

Query: 499 QLFSEMLHSGIRPSGVTFLSVLYAC----SHAGLVREGDEIFQSMIHDHGFKPLAEHYAC 554
            L+  M   G+     T+  VL AC    +   L+  G EI   ++  HGF+        
Sbjct: 165 DLYRRMNRIGVPSDRFTYTYVLKACVASEAFVSLLLNGREIHGHILR-HGFEGHVHIMTT 223

Query: 555 MVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGAC 591
           ++D+  R G +  A      + V+     W A++ AC
Sbjct: 224 LLDMYARFGCVLNASRVFDQMPVK-NVVSWSAMI-AC 258


>gi|414885949|tpg|DAA61963.1| TPA: hypothetical protein ZEAMMB73_954210 [Zea mays]
          Length = 633

 Score =  429 bits (1102), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 218/540 (40%), Positives = 327/540 (60%), Gaps = 3/540 (0%)

Query: 246 YVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLAS 305
           ++L  L+  Y KCG V  A  +F  +   D++S   +I+GY  N     ++ L   +L +
Sbjct: 96  FLLNSLIHMYCKCGAVSDARHVFDKMPSRDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRA 155

Query: 306 AERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAA 365
             R N  T   L+      G   +   +H+  +K     +  V +AL  +Y+R  +M+ A
Sbjct: 156 RFRPNGFTFTSLLKATGACGGCSIGEQMHALAVKYNWDEDVYVGSALLDMYARCEQMDMA 215

Query: 366 RKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQL 425
             +FD    K+  SWNA+IAG+ +    E  +  F EMQ +       T SS+ SA A++
Sbjct: 216 IMVFDRLVSKNEVSWNALIAGFARKADGETTLMKFAEMQRNGFGATHFTYSSMFSAFARI 275

Query: 426 GAISLGKWVH-ELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTM 484
           GA+  G+WVH  L+KS   +   +V   ++ MYAK G++V+AR++FD M  +  VTWNTM
Sbjct: 276 GALEQGRWVHAHLIKSGQ-KLTAFVGNTMLGMYAKSGSMVDARKVFDRMDKRDLVTWNTM 334

Query: 485 ISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHG 544
           ++    +G G EA+  F E+   GI+ + +TFLSVL ACSH GLV+EG   F  M+ D+ 
Sbjct: 335 LTALAQYGLGKEAVAHFEEIRKCGIQLNQITFLSVLTACSHGGLVKEGKHYFD-MMKDYN 393

Query: 545 FKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVAS 604
            +P  +HY   VD+LGRAG L++AL F+  + +EP  AVWGALLGAC +HK+  + + A+
Sbjct: 394 VQPEIDHYVSFVDLLGRAGLLKEALIFVFKMPMEPTAAVWGALLGACRMHKNAKMGQYAA 453

Query: 605 EKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVF 664
           + +FELDP++ G  VLL NIY++   +  AA VR+++K   + K P C+ +++  + H+F
Sbjct: 454 DHVFELDPDDTGPPVLLYNIYASTGKWNDAARVRKMMKATGVKKEPACSWVQIENSVHMF 513

Query: 665 TSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAF 724
            + D  HP+S  IY M E++N ++++AG+   T   L  + E+E+E  +K HSEK+A+AF
Sbjct: 514 VADDDTHPKSGDIYRMWEEINMRIKKAGYVPNTAHVLLHINEQERETKLKYHSEKIALAF 573

Query: 725 GLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
            LI    G  IRI+KN+R+C DCH+A K++SKV  R IVVRD NRFHHF  G CSCGDYW
Sbjct: 574 ALINMPAGASIRIMKNIRICGDCHSAFKYVSKVFKREIVVRDTNRFHHFSEGSCSCGDYW 633



 Score =  165 bits (418), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 102/394 (25%), Positives = 191/394 (48%), Gaps = 12/394 (3%)

Query: 104 LTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSAR 163
           L P    Y  +++A +   + +    +H H   S    D F+  +L+ +Y K   V  AR
Sbjct: 56  LAPTPRLYHSIIAACAQFKNLAGARAIHAHLSRSCLAGDAFLLNSLIHMYCKCGAVSDAR 115

Query: 164 KVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVR-----NGGTWLDSTSVAAVLP 218
            VFDKMP +D V W  +I+G  +N    ++I +  DM+R     NG T+       ++L 
Sbjct: 116 HVFDKMPSRDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFTF------TSLLK 169

Query: 219 AVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLIS 278
           A        +G ++  L +K  + + VYV + L+  Y++C +++ A ++F  +V  + +S
Sbjct: 170 ATGACGGCSIGEQMHALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRLVSKNEVS 229

Query: 279 CNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCL 338
            NA+I+G+      E++L  F ++  +       T   +   F   G L     +H+  +
Sbjct: 230 WNALIAGFARKADGETTLMKFAEMQRNGFGATHFTYSSMFSAFARIGALEQGRWVHAHLI 289

Query: 339 KSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAIS 398
           KSG    + V   +  +Y++   M  ARK+FD   ++ L +WN M+    Q GL +EA++
Sbjct: 290 KSGQKLTAFVGNTMLGMYAKSGSMVDARKVFDRMDKRDLVTWNTMLTALAQYGLGKEAVA 349

Query: 399 LFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYA 458
            F+E++   +  N +T  S+L+AC+  G +  GK   +++K  N +  I    + +D+  
Sbjct: 350 HFEEIRKCGIQLNQITFLSVLTACSHGGLVKEGKHYFDMMKDYNVQPEIDHYVSFVDLLG 409

Query: 459 KCGNIVEAR-ELFDLMSHKSEVTWNTMISGYGLH 491
           + G + EA   +F +    +   W  ++    +H
Sbjct: 410 RAGLLKEALIFVFKMPMEPTAAVWGALLGACRMH 443



 Score =  132 bits (332), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 68/217 (31%), Positives = 118/217 (54%)

Query: 324 FGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAM 383
           F +L     IH+   +S +  ++ +L +L  +Y +   +  AR +FD+   + + SW  +
Sbjct: 73  FKNLAGARAIHAHLSRSCLAGDAFLLNSLIHMYCKCGAVSDARHVFDKMPSRDVVSWTYL 132

Query: 384 IAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNF 443
           IAGY QN +  EAI L  +M  ++  PN  T +S+L A    G  S+G+ +H L    N+
Sbjct: 133 IAGYAQNYMPAEAIGLLPDMLRARFRPNGFTFTSLLKATGACGGCSIGEQMHALAVKYNW 192

Query: 444 ESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSE 503
           + ++YV +AL+DMYA+C  +  A  +FD +  K+EV+WN +I+G+     G   L  F+E
Sbjct: 193 DEDVYVGSALLDMYARCEQMDMAIMVFDRLVSKNEVSWNALIAGFARKADGETTLMKFAE 252

Query: 504 MLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMI 540
           M  +G   +  T+ S+  A +  G + +G  +   +I
Sbjct: 253 MQRNGFGATHFTYSSMFSAFARIGALEQGRWVHAHLI 289



 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 112/510 (21%), Positives = 215/510 (42%), Gaps = 53/510 (10%)

Query: 5   TPQSRNLFLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALF 64
           TP+  +  ++     K  +     HA +       D   +  L H      A   AR +F
Sbjct: 59  TPRLYHSIIAACAQFKNLAGARAIHAHLSRSCLAGDAFLLNSLIHMYCKCGAVSDARHVF 118

Query: 65  FSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDR 124
             +P  D+  +  +I G++ N MP  +I     + +     P+ FT++ +L A  AC   
Sbjct: 119 DKMPSRDVVSWTYLIAGYAQNYMPAEAIGLLPDMLR-ARFRPNGFTFTSLLKATGACGGC 177

Query: 125 SIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGL 184
           SIG  +H  A+   +  D++VG+AL+D+Y +   +  A  VFD++  K+ V WN++I+G 
Sbjct: 178 SIGEQMHALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRLVSKNEVSWNALIAGF 237

Query: 185 MKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDH 244
            +    + ++  F +M RNG      T  +++  A A +  L  G  +    +K G    
Sbjct: 238 ARKADGETTLMKFAEMQRNGFGATHFT-YSSMFSAFARIGALEQGRWVHAHLIKSGQKLT 296

Query: 245 VYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLA 304
            +V   ++  Y+K G +  A  +F  + + DL++ N M++     G  + ++  F ++  
Sbjct: 297 AFVGNTMLGMYAKSGSMVDARKVFDRMDKRDLVTWNTMLTALAQYGLGKEAVAHFEEIRK 356

Query: 305 SAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSG-----IVSNSSVLTALSTVYSRL 359
              ++N  T + +           LT C H   +K G     ++ + +V   +    S +
Sbjct: 357 CGIQLNQITFLSV-----------LTACSHGGLVKEGKHYFDMMKDYNVQPEIDHYVSFV 405

Query: 360 NEM-------EAARKLFDESSEKSLASWNAMIAG---YTQNGLTEEAISLFQEMQASKVA 409
           + +       EA   +F    E + A W A++     +    + + A     E+      
Sbjct: 406 DLLGRAGLLKEALIFVFKMPMEPTAAVWGALLGACRMHKNAKMGQYAADHVFELDPDDTG 465

Query: 410 PNPVTVSSILSACAQLGAISLGKW-----VHELVKSR-----------NFESNIYVSTAL 453
           P PV + +I +        S GKW     V +++K+              E+++++  A 
Sbjct: 466 P-PVLLYNIYA--------STGKWNDAARVRKMMKATGVKKEPACSWVQIENSVHMFVAD 516

Query: 454 IDMYAKCGNIVEARELFDLMSHKSEVTWNT 483
            D + K G+I    E  ++   K+    NT
Sbjct: 517 DDTHPKSGDIYRMWEEINMRIKKAGYVPNT 546



 Score = 90.1 bits (222), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 52/187 (27%), Positives = 94/187 (50%), Gaps = 2/187 (1%)

Query: 403 MQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGN 462
           + A ++AP P    SI++ACAQ   ++  + +H  +       + ++  +LI MY KCG 
Sbjct: 51  LHAGELAPTPRLYHSIIAACAQFKNLAGARAIHAHLSRSCLAGDAFLLNSLIHMYCKCGA 110

Query: 463 IVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYA 522
           + +AR +FD M  +  V+W  +I+GY  +    EA+ L  +ML +  RP+G TF S+L A
Sbjct: 111 VSDARHVFDKMPSRDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFTFTSLLKA 170

Query: 523 CSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPA 582
               G    G+++  ++   + +       + ++D+  R  Q++ A+     L V     
Sbjct: 171 TGACGGCSIGEQM-HALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRL-VSKNEV 228

Query: 583 VWGALLG 589
            W AL+ 
Sbjct: 229 SWNALIA 235


>gi|449480927|ref|XP_004156032.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g49710-like [Cucumis sativus]
          Length = 720

 Score =  429 bits (1102), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 238/653 (36%), Positives = 376/653 (57%), Gaps = 15/653 (2%)

Query: 142 DLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMV 201
           ++F    L+  Y K S+V+ A ++FD+MP+ D+V +N++I+   +    Q +  +F +M 
Sbjct: 73  NVFSFNTLISAYAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGDTQPAFQLFLEM- 131

Query: 202 RNGGTWLDSTSVAAVLPAVAEVQELRLGM--EIQCLGLKLGFHDHVYVLTGLVSFYSKCG 259
           R     +D  +++ ++ A      + +G+  ++  L +  G   +V V   L++ YSK G
Sbjct: 132 REAFLDMDGFTLSGIITACG----INVGLIRQLHALSVVTGLDSYVSVGNALITSYSKNG 187

Query: 260 EVERAELLFRDIVRP-DLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLI 318
            ++ A  +F  +    D +S N+M+  Y  + +   +L L+ ++      V+  T+  ++
Sbjct: 188 FLKEARRIFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLASVL 247

Query: 319 PVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNE-MEAARKLFDESSEKSL 377
             F     L      H+  +KSG   NS V + L  +YS+    M   RK+FDE S   L
Sbjct: 248 TAFTNVQDLLGGLQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEISNPDL 307

Query: 378 ASWNAMIAGYT-QNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHE 436
             WN MI+GY+    L++EA+  F+++Q     P+  ++  ++SAC+ + + S G+ VH 
Sbjct: 308 VLWNTMISGYSLYEDLSDEALECFRQLQGVGHRPDDCSLVCVISACSNMSSPSQGRQVHG 367

Query: 437 LVKSRNFESN-IYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGL 495
           L    +  SN I V+ ALI MY+KCGN+ +A+ LFD M   + V++N+MI+GY  HG G 
Sbjct: 368 LALKLDIPSNRISVNNALIAMYSKCGNLRDAKTLFDTMPEHNTVSYNSMIAGYAQHGMGF 427

Query: 496 EALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACM 555
           ++L LF  ML     P+ +TF+SVL AC+H G V +G   F  M    G +P A H++CM
Sbjct: 428 QSLHLFQRMLEMDFTPTNITFISVLAACAHTGRVEDGKIYFNMMKQKFGIEPEAGHFSCM 487

Query: 556 VDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENV 615
           +D+LGRAG+L +A   I+ +  +PG   W ALLGAC IH +  LA  A+ +L +LDP N 
Sbjct: 488 IDLLGRAGKLSEAERLIETIPFDPGFFXWSALLGACRIHGNVELAIKAANRLLQLDPLNA 547

Query: 616 GYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQST 675
             +V+L+NIYS       AA+VR++++ R + K PGC+ IEV    H+F + D  HP   
Sbjct: 548 APYVMLANIYSDNGRLQDAASVRKLMRDRGVKKKPGCSWIEVNRRIHIFVAEDTFHPMIK 607

Query: 676 AIYAMLEKLNGKMREAGFQTE----TVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEP 731
            I   LE++  K+++ G+  E    +V     V + E+EL +  HSEKLA++FGL++T  
Sbjct: 608 KIQEYLEEMMRKIKKVGYTPEVRSASVGGDDRVWQREEELRLGHHSEKLAVSFGLMSTRE 667

Query: 732 GTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           G  I + KNLR+C+DCH A K+IS+V  R I VRD++RFH FK G CSCG YW
Sbjct: 668 GEPILVFKNLRICVDCHNAIKYISEVVKREITVRDSHRFHCFKDGQCSCGGYW 720



 Score =  132 bits (332), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 95/346 (27%), Positives = 168/346 (48%), Gaps = 36/346 (10%)

Query: 224 QELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGE----------------------- 260
           ++LR G  +  L +K       Y+    +  YSKC                         
Sbjct: 22  RDLRTGKSLHALYIKSFVPTSTYLSNHFLLLYSKCRRLSAARRVFDHTHDCNVFSFNTLI 81

Query: 261 --------VERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSS 312
                   VE A  LF ++ +PD +S N +I+ Y   G T+ + +LF ++  +   ++  
Sbjct: 82  SAYAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGDTQPAFQLFLEMREAFLDMDGF 141

Query: 313 TIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDES 372
           T+ G+I       ++ L   +H+  + +G+ S  SV  AL T YS+   ++ AR++F   
Sbjct: 142 TLSGIITACGI--NVGLIRQLHALSVVTGLDSYVSVGNALITSYSKNGFLKEARRIFHWL 199

Query: 373 SE-KSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLG 431
           SE +   SWN+M+  Y Q+    +A+ L+ EM    +  +  T++S+L+A   +  +  G
Sbjct: 200 SEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLASVLTAFTNVQDLLGG 259

Query: 432 KWVHELVKSRNFESNIYVSTALIDMYAKCGN-IVEARELFDLMSHKSEVTWNTMISGYGL 490
              H  +    +  N +V + LID+Y+KCG  +++ R++FD +S+   V WNTMISGY L
Sbjct: 260 LQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEISNPDLVLWNTMISGYSL 319

Query: 491 HGH-GLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEI 535
           +     EAL+ F ++   G RP   + + V+ ACS+     +G ++
Sbjct: 320 YEDLSDEALECFRQLQGVGHRPDDCSLVCVISACSNMSSPSQGRQV 365



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 115/456 (25%), Positives = 192/456 (42%), Gaps = 40/456 (8%)

Query: 25  LTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKP-DLFLFNVIIRGFS 83
           + Q HA  ++ G  + +S    L    S       AR +F  + +  D   +N ++  + 
Sbjct: 157 IRQLHALSVVTGLDSYVSVGNALITSYSKNGFLKEARRIFHWLSEDRDEVSWNSMVVAYM 216

Query: 84  NNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDL 143
            +     ++  Y  +     L  D FT + VL+A +   D   G+  H   I SGY  + 
Sbjct: 217 QHREGSKALELYLEMTVR-GLIVDIFTLASVLTAFTNVQDLLGGLQFHAKLIKSGYHQNS 275

Query: 144 FVGAALVDLYFKF-SWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVR 202
            VG+ L+DLY K    +   RKVFD++   D VLWN+MISG        D        ++
Sbjct: 276 HVGSGLIDLYSKCGGCMLDCRKVFDEISNPDLVLWNTMISGYSLYEDLSDEALECFRQLQ 335

Query: 203 NGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGF-HDHVYVLTGLVSFYSKCGEV 261
             G   D  S+  V+ A + +     G ++  L LKL    + + V   L++ YSKCG +
Sbjct: 336 GVGHRPDDCSLVCVISACSNMSSPSQGRQVHGLALKLDIPSNRISVNNALIAMYSKCGNL 395

Query: 262 ERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVF 321
             A+ LF  +   + +S N+MI+GY  +G    SL LF+++L   E   + T +  I V 
Sbjct: 396 RDAKTLFDTMPEHNTVSYNSMIAGYAQHGMGFQSLHLFQRML---EMDFTPTNITFISV- 451

Query: 322 YPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWN 381
                  L  C H+  ++ G +                N M+    +     E     ++
Sbjct: 452 -------LAACAHTGRVEDGKIY--------------FNMMKQKFGI-----EPEAGHFS 485

Query: 382 AMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLG-KWVHELVKS 440
            MI    + G   EA  L + +      P     S++L AC   G + L  K  + L++ 
Sbjct: 486 CMIDLLGRAGKLSEAERLIETI---PFDPGFFXWSALLGACRIHGNVELAIKAANRLLQL 542

Query: 441 RNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHK 476
               +  YV   L ++Y+  G + +A  +  LM  +
Sbjct: 543 DPLNAAPYV--MLANIYSDNGRLQDAASVRKLMRDR 576



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 40/158 (25%), Positives = 71/158 (44%), Gaps = 5/158 (3%)

Query: 444 ESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSE 503
           + N++    LI  YAK   +  A +LFD M     V++NT+I+ Y   G    A QLF E
Sbjct: 71  DCNVFSFNTLISAYAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGDTQPAFQLFLE 130

Query: 504 MLHSGIRPSGVTFLSVLYACS-HAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRA 562
           M  + +   G T   ++ AC  + GL+R+      ++    G          ++    + 
Sbjct: 131 MREAFLDMDGFTLSGIITACGINVGLIRQ----LHALSVVTGLDSYVSVGNALITSYSKN 186

Query: 563 GQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLA 600
           G L++A      L+ +     W +++ A M H++ + A
Sbjct: 187 GFLKEARRIFHWLSEDRDEVSWNSMVVAYMQHREGSKA 224



 Score = 48.5 bits (114), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 32/121 (26%), Positives = 57/121 (47%), Gaps = 4/121 (3%)

Query: 419 LSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSE 478
           L  C     +  GK +H L       ++ Y+S   + +Y+KC  +  AR +FD     + 
Sbjct: 15  LKTCIAHRDLRTGKSLHALYIKSFVPTSTYLSNHFLLLYSKCRRLSAARRVFDHTHDCNV 74

Query: 479 VTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQS 538
            ++NT+IS Y    +   A QLF EM     +P  V++ +++ A +  G  +   ++F  
Sbjct: 75  FSFNTLISAYAKESYVEVAHQLFDEM----PQPDSVSYNTLIAAYARRGDTQPAFQLFLE 130

Query: 539 M 539
           M
Sbjct: 131 M 131


>gi|297737063|emb|CBI26264.3| unnamed protein product [Vitis vinifera]
          Length = 583

 Score =  429 bits (1102), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 240/585 (41%), Positives = 341/585 (58%), Gaps = 11/585 (1%)

Query: 207 WLDSTSVAAVLPAVAEVQELRLGMEIQCLGLK-LGFHDHVYVLTGLVSFYSKCGEVERAE 265
           +L   S+A+++ +    Q  RLG       +K L      ++   LV+ YSK      A+
Sbjct: 3   FLSPNSLASLVESAVSTQCSRLGRAAHAQIIKTLDNPLPSFIYNHLVNMYSKLDRPNSAQ 62

Query: 266 LLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIP-VFYPF 324
           LL        +++  A+I+G   NG+  S+L  F  +   + + N  T     P  F   
Sbjct: 63  LLLSLTPNRSVVTWTALIAGSVQNGRFTSALFHFSNMRRDSIQPNDFTF----PCAFKAS 118

Query: 325 GHLH---LTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWN 381
           G L    +   +H+  +K+G +S+  V  +   +YS+    E ARK+FDE  E+++A+WN
Sbjct: 119 GSLRSPLVGKQVHALAVKAGQISDVFVGCSAFDMYSKAGLTEEARKMFDEMPERNIATWN 178

Query: 382 AMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSR 441
           A ++     G  ++A++ F E +   + P    VSS+LSACA L  + +GK VH L    
Sbjct: 179 AYLSNSVLEGRYDDALTAFIEARKEGIEPTDFMVSSVLSACAGLSVLEVGKSVHTLAVKA 238

Query: 442 NFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLF 501
               NI+V +AL+DMY KCG+I +A   FD M  ++ VTWN MI GY   G    A+ LF
Sbjct: 239 CVVGNIFVGSALVDMYGKCGSIEDAERAFDEMPERNLVTWNAMIGGYAHQGQADMAVTLF 298

Query: 502 SEMLHSGIR--PSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDIL 559
            EM     R  P+ VTF+ VL ACS AG V  G EIF+SM   +G +P AEHYAC+VD+L
Sbjct: 299 DEMTCGSHRVAPNYVTFVCVLSACSRAGSVNVGMEIFESMRGRYGIEPGAEHYACVVDLL 358

Query: 560 GRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHV 619
           GRAG +E+A +FIK + + P  +VWGALLGA  +   + L +VA++ LFELDP + G HV
Sbjct: 359 GRAGMVEQAYQFIKKMPIRPTVSVWGALLGASKMFGKSELGKVAADNLFELDPLDSGNHV 418

Query: 620 LLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYA 679
           LLSN+++A   + +A  VR+ +K   + K  GC+ I  G   HVF + D  H +++ I A
Sbjct: 419 LLSNMFAAAGRWEEATLVRKEMKDVGIKKGAGCSWITAGNAVHVFQAKDTSHERNSEIQA 478

Query: 680 MLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIK 739
           ML KL G+M  AG+  +T  AL D+EEEEK + +  HSEK+A+AFGLI+   G  IRI K
Sbjct: 479 MLAKLRGEMEAAGYIPDTSFALFDLEEEEKAMEVWYHSEKIALAFGLISIPAGVPIRITK 538

Query: 740 NLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           NLR+C DCH+A KFIS + GR I+VRD N FH F+   CSC DYW
Sbjct: 539 NLRICGDCHSAIKFISGIVGREIIVRDNNLFHRFRDNQCSCRDYW 583



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 120/465 (25%), Positives = 213/465 (45%), Gaps = 42/465 (9%)

Query: 8   SRNLFLSLLKGA-KTQ-SQLTQT-HAQIIIHGFQNDLSTV--TKLAHRLSDFKATCYARA 62
           S N   SL++ A  TQ S+L +  HAQII     N L +     L +  S       A+ 
Sbjct: 5   SPNSLASLVESAVSTQCSRLGRAAHAQII-KTLDNPLPSFIYNHLVNMYSKLDRPNSAQL 63

Query: 63  LFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACC 122
           L    P   +  +  +I G   N    S++  ++++R+++ + P++FT+     A+ +  
Sbjct: 64  LLSLTPNRSVVTWTALIAGSVQNGRFTSALFHFSNMRRDS-IQPNDFTFPCAFKASGSLR 122

Query: 123 DRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMIS 182
              +G  +H  A+ +G  SD+FVG +  D+Y K    + ARK+FD+MPE++   WN+ +S
Sbjct: 123 SPLVGKQVHALAVKAGQISDVFVGCSAFDMYSKAGLTEEARKMFDEMPERNIATWNAYLS 182

Query: 183 GLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFH 242
             +    + D++  F +  + G    D   V++VL A A +  L +G  +  L +K    
Sbjct: 183 NSVLEGRYDDALTAFIEARKEGIEPTDFM-VSSVLSACAGLSVLEVGKSVHTLAVKACVV 241

Query: 243 DHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQL 302
            +++V + LV  Y KCG +E AE  F ++   +L++ NAMI GY   G+ + ++ LF ++
Sbjct: 242 GNIFVGSALVDMYGKCGSIEDAERAFDEMPERNLVTWNAMIGGYAHQGQADMAVTLFDEM 301

Query: 303 LASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEM 362
              + RV         P +  F       C+ S C ++G V+          V   + E 
Sbjct: 302 TCGSHRV--------APNYVTF------VCVLSACSRAGSVN----------VGMEIFES 337

Query: 363 EAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSAC 422
              R   +  +E     +  ++    + G+ E+A    ++M    + P      ++L A 
Sbjct: 338 MRGRYGIEPGAEH----YACVVDLLGRAGMVEQAYQFIKKM---PIRPTVSVWGALLGAS 390

Query: 423 AQLGAISLGKWVHE-LVKSRNFESNIYVSTALIDMYAKCGNIVEA 466
              G   LGK   + L +    +S  +V   L +M+A  G   EA
Sbjct: 391 KMFGKSELGKVAADNLFELDPLDSGNHV--LLSNMFAAAGRWEEA 433


>gi|16905194|gb|AAL31064.1|AC090120_10 hypothetical protein [Oryza sativa Japonica Group]
 gi|31432781|gb|AAP54374.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 698

 Score =  428 bits (1101), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 241/688 (35%), Positives = 386/688 (56%), Gaps = 11/688 (1%)

Query: 105 TPDNFTYSFVLSAASACC---DRSIGVLLHGHAIVSGYGS-DLFVGAALVDLYFKFSWVK 160
            PD  T   + S   +C    D   G LLH   ++SG  +   F+   L+ +Y   + + 
Sbjct: 14  APDAATTVHLASLLQSCGRAGDLRRGRLLHARLVLSGAAAASTFLANHLITMYSHCADLA 73

Query: 161 SARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAV 220
           SA ++F  MP ++ V W +++SGL +N    D++  F  M R  G      ++++   A 
Sbjct: 74  SALRLFAAMPRRNAVSWTTLVSGLSQNLMHADALAAFAAM-RRAGVAPTRFALSSAARAA 132

Query: 221 AEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCN 280
           A +     G ++ C+G++LGF   ++V + L   YSKCG +  A  +F  + + D ++  
Sbjct: 133 AALGAPLPGAQLHCVGVRLGFDTELFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWT 192

Query: 281 AMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLH---LTNCIHSFC 337
           AMI GY  NG  E+++  FR +    E +  +       V    G L    L+  IH   
Sbjct: 193 AMIDGYAKNGSLEAAVLSFRDM--KREGLVGADQHVFCSVLSASGGLKDGWLSKSIHCCV 250

Query: 338 LKSGIVSNSSVLTALSTVYSRLNEMEAARKLFD-ESSEKSLASWNAMIAGYTQNGLTEEA 396
            K+G     +V  AL  +Y++  ++E+A ++   +    ++ S  +MI GY +    EEA
Sbjct: 251 TKAGFELEVAVRNALIDMYAKSMDVESASRVLKIDPGGWNVVSGTSMIDGYIETDCVEEA 310

Query: 397 ISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDM 456
           + ++ E++   V PN  T SS++  CA    +  G  +H  V   +   + +V + L+DM
Sbjct: 311 LVIYVELRRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGSTLVDM 370

Query: 457 YAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTF 516
           Y KCG I  + +LF+ + +++++ WN +I+ +  HGHG EA+Q F  M++SGIRP+ + F
Sbjct: 371 YGKCGLISLSMQLFNEIEYRTDIAWNAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIAF 430

Query: 517 LSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLA 576
           +S+L ACSHAGLV EG + F SM   HG +P  EHY+C++D  GRAG+L++A +FI  + 
Sbjct: 431 VSLLTACSHAGLVDEGLKYFYSMKEAHGIEPKEEHYSCIIDTYGRAGRLDEAYKFISEMP 490

Query: 577 VEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAAT 636
           ++P    W +LLGAC +     L  VA++ L +L+P N G HV LS IY++   +     
Sbjct: 491 IKPNAYGWCSLLGACRMRGSKELGEVAAQNLMKLEPGNTGIHVSLSGIYASLGQWEDVKA 550

Query: 637 VRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTE 696
           VR++++  ++ K PG + ++     HVF S D  HPQ   IY  LE+L  +++E G+  +
Sbjct: 551 VRKLMRDSRIKKLPGFSWVDSNKKTHVFGSEDWSHPQQKDIYEKLEELTTRIKEEGYIPD 610

Query: 697 TVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISK 756
           T     ++E+  KE +++ HSE++A+AF LI+      I + KNLR+C+DCHTA KFI K
Sbjct: 611 TSFLPCNLEDIAKERILRYHSERIAVAFALISMPATKPIIVKKNLRICIDCHTAFKFICK 670

Query: 757 VTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           V  R I+VRD +RFHHF  G CSCGDYW
Sbjct: 671 VERRDIIVRDNSRFHHFVNGRCSCGDYW 698



 Score =  162 bits (410), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 126/471 (26%), Positives = 219/471 (46%), Gaps = 11/471 (2%)

Query: 29  HAQIIIHGFQNDLSTVTKLAHRLSDFKATCY----ARALFFSIPKPDLFLFNVIIRGFSN 84
           HA++++ G     +  T LA+ L    + C     A  LF ++P+ +   +  ++ G S 
Sbjct: 43  HARLVLSGAA---AASTFLANHLITMYSHCADLASALRLFAAMPRRNAVSWTTLVSGLSQ 99

Query: 85  NEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLF 144
           N M   ++  +  +R+   + P  F  S    AA+A      G  LH   +  G+ ++LF
Sbjct: 100 NLMHADALAAFAAMRR-AGVAPTRFALSSAARAAAALGAPLPGAQLHCVGVRLGFDTELF 158

Query: 145 VGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNG 204
           V + L D+Y K   +  A +VFD+MP+KD V W +MI G  KN   + ++  F DM R G
Sbjct: 159 VASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKNGSLEAAVLSFRDMKREG 218

Query: 205 GTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERA 264
               D     +VL A   +++  L   I C   K GF   V V   L+  Y+K  +VE A
Sbjct: 219 LVGADQHVFCSVLSASGGLKDGWLSKSIHCCVTKAGFELEVAVRNALIDMYAKSMDVESA 278

Query: 265 ELLFR-DIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYP 323
             + + D    +++S  +MI GY      E +L ++ +L       N  T   +I     
Sbjct: 279 SRVLKIDPGGWNVVSGTSMIDGYIETDCVEEALVIYVELRRQGVEPNEFTFSSMIKGCAM 338

Query: 324 FGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAM 383
              L     +H+  +K+ ++ +S V + L  +Y +   +  + +LF+E   ++  +WNA+
Sbjct: 339 QALLEQGAQLHAQVIKTDLIRDSFVGSTLVDMYGKCGLISLSMQLFNEIEYRTDIAWNAV 398

Query: 384 IAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLG-KWVHELVKSRN 442
           I  + Q+G   EAI  F  M  S + PN +   S+L+AC+  G +  G K+ + + ++  
Sbjct: 399 INVFAQHGHGREAIQAFDRMIYSGIRPNHIAFVSLLTACSHAGLVDEGLKYFYSMKEAHG 458

Query: 443 FESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEV-TWNTMISGYGLHG 492
            E      + +ID Y + G + EA +    M  K     W +++    + G
Sbjct: 459 IEPKEEHYSCIIDTYGRAGRLDEAYKFISEMPIKPNAYGWCSLLGACRMRG 509



 Score = 99.0 bits (245), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 105/449 (23%), Positives = 192/449 (42%), Gaps = 38/449 (8%)

Query: 27  QTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNE 86
           Q H   +  GF  +L   + LA   S       A  +F  +P+ D   +  +I G++ N 
Sbjct: 143 QLHCVGVRLGFDTELFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKNG 202

Query: 87  MPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVG 146
             ++++  +  +++   +  D   +  VLSA+    D  +   +H     +G+  ++ V 
Sbjct: 203 SLEAAVLSFRDMKREGLVGADQHVFCSVLSASGGLKDGWLSKSIHCCVTKAGFELEVAVR 262

Query: 147 AALVDLYFKFSWVKSARKVFDKMPEK-DTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGG 205
            AL+D+Y K   V+SA +V    P   + V   SMI G ++  C ++++ ++ ++ R  G
Sbjct: 263 NALIDMYAKSMDVESASRVLKIDPGGWNVVSGTSMIDGYIETDCVEEALVIYVEL-RRQG 321

Query: 206 TWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAE 265
              +  + ++++   A    L  G ++    +K       +V + LV  Y KCG +  + 
Sbjct: 322 VEPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGSTLVDMYGKCGLISLSM 381

Query: 266 LLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFG 325
            LF +I     I+ NA+I+ +  +G    +++ F +++ S  R N    V L        
Sbjct: 382 QLFNEIEYRTDIAWNAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIAFVSL-------- 433

Query: 326 HLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIA 385
              LT C H+  +  G          L   YS    M+ A  +     E     ++ +I 
Sbjct: 434 ---LTACSHAGLVDEG----------LKYFYS----MKEAHGI-----EPKEEHYSCIID 471

Query: 386 GYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGK-WVHELVKSRNFE 444
            Y + G  +EA     EM    + PN     S+L AC   G+  LG+     L+K     
Sbjct: 472 TYGRAGRLDEAYKFISEM---PIKPNAYGWCSLLGACRMRGSKELGEVAAQNLMKLEPGN 528

Query: 445 SNIYVSTALIDMYAKCGNIVEARELFDLM 473
           + I+VS  L  +YA  G   + + +  LM
Sbjct: 529 TGIHVS--LSGIYASLGQWEDVKAVRKLM 555


>gi|224079221|ref|XP_002305798.1| predicted protein [Populus trichocarpa]
 gi|222848762|gb|EEE86309.1| predicted protein [Populus trichocarpa]
          Length = 584

 Score =  428 bits (1101), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 225/540 (41%), Positives = 332/540 (61%), Gaps = 1/540 (0%)

Query: 246 YVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMI-SGYTCNGKTESSLRLFRQLLA 304
           ++LT L++     G +     +F  +  PD     ++I S    +  +  SL  + +++ 
Sbjct: 45  FLLTKLLNLACAAGSISYTRQIFLIVPNPDSFLFTSLIRSTSKFHNFSVYSLYFYTRMVL 104

Query: 305 SAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEA 364
           S    ++ T   +I        L     IH   L +G  S+  V TAL + Y +   +  
Sbjct: 105 SNVAPSNYTFTSVIKSCADLVALRHGRIIHGHVLVNGFGSDVYVQTALMSFYGKCGVLCN 164

Query: 365 ARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQ 424
           ARK+FD+  ++S+ +WN+MI+GY QNG  +EAI LF  M+   V PN  T  S+LSACA 
Sbjct: 165 ARKVFDKMRDRSVVTWNSMISGYEQNGFAKEAIRLFDRMKEIGVEPNSATFVSVLSACAH 224

Query: 425 LGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTM 484
           LGA  LG WVHE       + N+ + T+LI+MY +CGN+ +ARE+FD M  ++ V W  M
Sbjct: 225 LGAFILGCWVHEYAVGNGLDLNVVLGTSLINMYTRCGNVSKAREVFDSMKERNVVAWTAM 284

Query: 485 ISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHG 544
           ISGYG +G+G +A++LF EM  +G+ P+ +TF++VL AC+HAGLV EG  +F+SM  ++ 
Sbjct: 285 ISGYGTNGYGSQAVELFHEMRRNGLLPNSITFVAVLSACAHAGLVNEGRRVFESMREEYR 344

Query: 545 FKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVAS 604
             P  EH+ C+VD+LGRAG L++A  FIK +  EP PA+W A+LGAC +HK+  L    +
Sbjct: 345 LVPEVEHHVCLVDMLGRAGLLDEAYNFIKEIHEEPAPAIWTAMLGACKMHKNFGLGAQVA 404

Query: 605 EKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVF 664
           E     +P N  ++V+LSNIY+      Q   VR  + ++ L K  G + I++    ++F
Sbjct: 405 EHRLASEPGNPAHYVILSNIYALAGRMDQVEMVRDNMIRKCLKKQVGYSTIDLDRKTYLF 464

Query: 665 TSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAF 724
           + GD+ H ++  IY  L++L  K REAG+ T + + +H++EEEE+E  +  HSEKLAIAF
Sbjct: 465 SMGDKSHTETNEIYHYLDQLMRKCREAGYVTVSDSVMHELEEEEREYALGYHSEKLAIAF 524

Query: 725 GLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           GL+ T  GT IRI+KNLR+C DCH+A K+IS ++ R I+VRD  RFHHFK G CSC DYW
Sbjct: 525 GLLKTSRGTVIRIVKNLRMCEDCHSAIKYISVISNREIIVRDKLRFHHFKNGSCSCLDYW 584



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 121/415 (29%), Positives = 206/415 (49%), Gaps = 7/415 (1%)

Query: 130 LHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCC 189
           +H H IVSGYG   F+   L++L      +   R++F  +P  D+ L+ S+I    K   
Sbjct: 31  VHAHVIVSGYGCSRFLLTKLLNLACAAGSISYTRQIFLIVPNPDSFLFTSLIRSTSKFHN 90

Query: 190 FQ-DSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVL 248
           F   S++ +  MV +     + T   +V+ + A++  LR G  I    L  GF   VYV 
Sbjct: 91  FSVYSLYFYTRMVLSNVAPSNYT-FTSVIKSCADLVALRHGRIIHGHVLVNGFGSDVYVQ 149

Query: 249 TGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAER 308
           T L+SFY KCG +  A  +F  +    +++ N+MISGY  NG  + ++RLF ++      
Sbjct: 150 TALMSFYGKCGVLCNARKVFDKMRDRSVVTWNSMISGYEQNGFAKEAIRLFDRMKEIGVE 209

Query: 309 VNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKL 368
            NS+T V ++      G   L   +H + + +G+  N  + T+L  +Y+R   +  AR++
Sbjct: 210 PNSATFVSVLSACAHLGAFILGCWVHEYAVGNGLDLNVVLGTSLINMYTRCGNVSKAREV 269

Query: 369 FDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAI 428
           FD   E+++ +W AMI+GY  NG   +A+ LF EM+ + + PN +T  ++LSACA  G +
Sbjct: 270 FDSMKERNVVAWTAMISGYGTNGYGSQAVELFHEMRRNGLLPNSITFVAVLSACAHAGLV 329

Query: 429 SLGKWVHELVKSR-NFESNIYVSTALIDMYAKCGNIVEARELF-DLMSHKSEVTWNTMIS 486
           + G+ V E ++        +     L+DM  + G + EA     ++    +   W  M+ 
Sbjct: 330 NEGRRVFESMREEYRLVPEVEHHVCLVDMLGRAGLLDEAYNFIKEIHEEPAPAIWTAMLG 389

Query: 487 GYGLHGH-GLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMI 540
              +H + GL A      +      P+    LS +YA   AG + + + +  +MI
Sbjct: 390 ACKMHKNFGLGAQVAEHRLASEPGNPAHYVILSNIYAL--AGRMDQVEMVRDNMI 442



 Score =  170 bits (430), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 126/434 (29%), Positives = 208/434 (47%), Gaps = 37/434 (8%)

Query: 4   KTPQSRNLFLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARAL 63
           K P S    L L  G + +  L Q HA +I+ G+      +TKL +      +  Y R +
Sbjct: 8   KHPHSPAYNLLLQAGPRLK-LLHQVHAHVIVSGYGCSRFLLTKLLNLACAAGSISYTRQI 66

Query: 64  FFSIPKPDLFLFNVIIRGFSN-NEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACC 122
           F  +P PD FLF  +IR  S  +     S+ FYT +  +  + P N+T++ V+ + +   
Sbjct: 67  FLIVPNPDSFLFTSLIRSTSKFHNFSVYSLYFYTRMVLSN-VAPSNYTFTSVIKSCADLV 125

Query: 123 DRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMIS 182
               G ++HGH +V+G+GSD++V  AL+  Y K   + +ARKVFDKM ++  V WNSMIS
Sbjct: 126 ALRHGRIIHGHVLVNGFGSDVYVQTALMSFYGKCGVLCNARKVFDKMRDRSVVTWNSMIS 185

Query: 183 GLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFH 242
           G  +N   +++I +F D ++  G   +S +  +VL A A +    LG  +    +  G  
Sbjct: 186 GYEQNGFAKEAIRLF-DRMKEIGVEPNSATFVSVLSACAHLGAFILGCWVHEYAVGNGLD 244

Query: 243 DHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQL 302
            +V + T L++ Y++CG V +A  +F  +   ++++  AMISGY  NG    ++ LF ++
Sbjct: 245 LNVVLGTSLINMYTRCGNVSKAREVFDSMKERNVVAWTAMISGYGTNGYGSQAVELFHEM 304

Query: 303 LASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEM 362
             +    NS T V +           L+ C H+  +  G      V  ++   Y  + E+
Sbjct: 305 RRNGLLPNSITFVAV-----------LSACAHAGLVNEG----RRVFESMREEYRLVPEV 349

Query: 363 EAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSAC 422
           E    L D            M+    + GL +EA +  +E+      P P   +++L AC
Sbjct: 350 EHHVCLVD------------MLG---RAGLLDEAYNFIKEIHEE---PAPAIWTAMLGAC 391

Query: 423 AQLGAISLGKWVHE 436
                  LG  V E
Sbjct: 392 KMHKNFGLGAQVAE 405


>gi|224092360|ref|XP_002309575.1| predicted protein [Populus trichocarpa]
 gi|222855551|gb|EEE93098.1| predicted protein [Populus trichocarpa]
          Length = 653

 Score =  428 bits (1101), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 240/653 (36%), Positives = 362/653 (55%), Gaps = 7/653 (1%)

Query: 138 GYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVF 197
           G+G DL +   L+ +Y K   +  A  VFD+M +++ V W +++ G ++N    +S+ +F
Sbjct: 2   GFGFDLMLSNDLIVMYGKCGRLGVACDVFDRMLKRNVVSWTALMCGHIQNGNPLESLLLF 61

Query: 198 GDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSK 257
             M  +G    D T  +  L A   +  L +G +I  + +K GF     V   ++  YSK
Sbjct: 62  SKMGLSGVKPNDFT-FSTNLKACGLLNGLDIGRQIHDICVKTGFDMVNVVGNSIIDMYSK 120

Query: 258 CGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGL 317
           CG +  A  +F  +   +LIS NAMI+GYT  G  E +L LF+++      ++  T    
Sbjct: 121 CGRINEAACMFEVMPVRNLISWNAMIAGYTVAGFCEKALVLFQKMQEVGGFLDEFTFTST 180

Query: 318 IPVFYPFGHLHLTNCIHSFCLKSGIVS--NSSVLTALSTVYSRLNEMEAARKLFDESSEK 375
           +      G +   N IH+F +  G +   N++V  AL  +Y +  ++  AR++F    EK
Sbjct: 181 LKACSDLGAIKEGNQIHAFLITGGFLYSVNTAVAGALIDLYVKCGKLFMARRVFSHIEEK 240

Query: 376 SLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVH 435
            + SW A+I GY Q G   E++ LF++++ S +  +   +SS++   A    +  GK +H
Sbjct: 241 HVISWTALILGYAQEGNLAESMELFRQLRESSIQVDGFILSSMMGVFADFALVQQGKQMH 300

Query: 436 ELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGL 495
                     +I V  +++DMY KCG I EA  LF  M  ++ ++W  MI+GYG HG G 
Sbjct: 301 AFAIKVPSGVDISVCNSILDMYLKCGMINEAERLFSEMPARNVISWTVMITGYGKHGLGK 360

Query: 496 EALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACM 555
           EA++LF EM      P  VT+L+VL  CSH+GLV +G E F  +   HG K   EHYACM
Sbjct: 361 EAIRLFDEMQLDSTEPDDVTYLAVLLGCSHSGLVEKGQEYFSRLCSYHGIKARVEHYACM 420

Query: 556 VDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENV 615
           VD+LGRAG+L++A   +  + +E    +W  LL AC +H D  L +     L  LD EN 
Sbjct: 421 VDLLGRAGRLKEAKNLVDSMPLEANVGIWQTLLSACRVHGDLELGKEVGGILLRLDSENP 480

Query: 616 GYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQST 675
             +V++SNIY+    + +   +R++VK +KL K  G + +E+    H F  GD  HP + 
Sbjct: 481 VNYVMMSNIYADAGYWKECERIRELVKSKKLKKEAGRSWVEIDKEVHFFYGGDDTHPLTE 540

Query: 676 AIYAMLEKLNGKMREA-GFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLI--ATEPG 732
            I+ +L+++  +M+E  G+      ALHDVEEE K   ++VHSEKLAI   L+    E G
Sbjct: 541 KIHEILKEMERRMKEELGYVYGVKYALHDVEEESKMDNLRVHSEKLAIGLALVCGGLEEG 600

Query: 733 TE-IRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
            + IR+ KNLRVC DCH   K +SK+   V VVRDANRFH F+ G+CSC DYW
Sbjct: 601 RKVIRVFKNLRVCGDCHEFIKGLSKILRVVFVVRDANRFHRFEDGLCSCRDYW 653



 Score =  178 bits (452), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 129/482 (26%), Positives = 233/482 (48%), Gaps = 17/482 (3%)

Query: 63  LFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACC 122
           +F  + K ++  +  ++ G   N  P  S+  ++ +   + + P++FT+S  L A     
Sbjct: 29  VFDRMLKRNVVSWTALMCGHIQNGNPLESLLLFSKMGL-SGVKPNDFTFSTNLKACGLLN 87

Query: 123 DRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMIS 182
              IG  +H   + +G+     VG +++D+Y K   +  A  +F+ MP ++ + WN+MI+
Sbjct: 88  GLDIGRQIHDICVKTGFDMVNVVGNSIIDMYSKCGRINEAACMFEVMPVRNLISWNAMIA 147

Query: 183 GLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFH 242
           G       + ++ +F  M   GG +LD  +  + L A +++  ++ G +I    +  GF 
Sbjct: 148 GYTVAGFCEKALVLFQKMQEVGG-FLDEFTFTSTLKACSDLGAIKEGNQIHAFLITGGFL 206

Query: 243 DHV--YVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFR 300
             V   V   L+  Y KCG++  A  +F  I    +IS  A+I GY   G    S+ LFR
Sbjct: 207 YSVNTAVAGALIDLYVKCGKLFMARRVFSHIEEKHVISWTALILGYAQEGNLAESMELFR 266

Query: 301 QLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLN 360
           QL  S+ +V+   +  ++ VF  F  +     +H+F +K     + SV  ++  +Y +  
Sbjct: 267 QLRESSIQVDGFILSSMMGVFADFALVQQGKQMHAFAIKVPSGVDISVCNSILDMYLKCG 326

Query: 361 EMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILS 420
            +  A +LF E   +++ SW  MI GY ++GL +EAI LF EMQ     P+ VT  ++L 
Sbjct: 327 MINEAERLFSEMPARNVISWTVMITGYGKHGLGKEAIRLFDEMQLDSTEPDDVTYLAVLL 386

Query: 421 ACAQLGAISLGK-WVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEV 479
            C+  G +  G+ +   L      ++ +     ++D+  + G + EA+ L D M  ++ V
Sbjct: 387 GCSHSGLVEKGQEYFSRLCSYHGIKARVEHYACMVDLLGRAGRLKEAKNLVDSMPLEANV 446

Query: 480 -TWNTMISGYGLHGHGLEALQLFSEMLHSGIR-----PSGVTFLSVLYACSHAGLVREGD 533
             W T++S   +HG     L+L  E+    +R     P     +S +YA   AG  +E +
Sbjct: 447 GIWQTLLSACRVHGD----LELGKEVGGILLRLDSENPVNYVMMSNIYA--DAGYWKECE 500

Query: 534 EI 535
            I
Sbjct: 501 RI 502



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 92/299 (30%), Positives = 155/299 (51%), Gaps = 2/299 (0%)

Query: 239 LGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRL 298
           +GF   + +   L+  Y KCG +  A  +F  +++ +++S  A++ G+  NG    SL L
Sbjct: 1   MGFGFDLMLSNDLIVMYGKCGRLGVACDVFDRMLKRNVVSWTALMCGHIQNGNPLESLLL 60

Query: 299 FRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSR 358
           F ++  S  + N  T    +        L +   IH  C+K+G    + V  ++  +YS+
Sbjct: 61  FSKMGLSGVKPNDFTFSTNLKACGLLNGLDIGRQIHDICVKTGFDMVNVVGNSIIDMYSK 120

Query: 359 LNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSI 418
              +  A  +F+    ++L SWNAMIAGYT  G  E+A+ LFQ+MQ      +  T +S 
Sbjct: 121 CGRINEAACMFEVMPVRNLISWNAMIAGYTVAGFCEKALVLFQKMQEVGGFLDEFTFTST 180

Query: 419 LSACAQLGAISLGKWVHELVKSRNF--ESNIYVSTALIDMYAKCGNIVEARELFDLMSHK 476
           L AC+ LGAI  G  +H  + +  F    N  V+ ALID+Y KCG +  AR +F  +  K
Sbjct: 181 LKACSDLGAIKEGNQIHAFLITGGFLYSVNTAVAGALIDLYVKCGKLFMARRVFSHIEEK 240

Query: 477 SEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEI 535
             ++W  +I GY   G+  E+++LF ++  S I+  G    S++   +   LV++G ++
Sbjct: 241 HVISWTALILGYAQEGNLAESMELFRQLRESSIQVDGFILSSMMGVFADFALVQQGKQM 299


>gi|356522333|ref|XP_003529801.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15930-like [Glycine max]
          Length = 650

 Score =  428 bits (1101), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 237/659 (35%), Positives = 362/659 (54%), Gaps = 38/659 (5%)

Query: 130 LHGHAIVSGYGSDLFVGAALVDL--YFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKN 187
           +H H I  G  SD      ++      +   +  A +VFD +P     +WN+MI G  K 
Sbjct: 26  IHSHTIKMGLSSDPLFRNRVIAFCCAHESGNMNYAHQVFDTIPHPSMFIWNTMIKGYSKI 85

Query: 188 CCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYV 247
              ++ + ++  M+       D  +    L        L+ G E+    +K GF  +++V
Sbjct: 86  SHPENGVSMYLLML-TSNIKPDRFTFPFSLKGFTRDMALQHGKELLNHAVKHGFDSNLFV 144

Query: 248 LTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAE 307
               +  +S CG V+ A  +F      ++++ N M+SGY                     
Sbjct: 145 QKAFIHMFSLCGIVDLAHKVFDMGDACEVVTWNIMLSGYN-------------------- 184

Query: 308 RVNSSTIVGLIPVFYPFGHLH-LTNCIHSF-CLKSGIVSNSSVLTALSTVYSRLNEMEAA 365
           RV    I  ++ V      L  L    H F  +  GIV +         +++   EM+ A
Sbjct: 185 RVKQFKISKMLLVLSACSKLKDLEWGKHIFKYINGGIVEH---------MFAACGEMDEA 235

Query: 366 RKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQL 425
           + +FD    + + SW AMI GY +      A++LF+EMQ S V P+  T+ SIL ACA L
Sbjct: 236 QGVFDNMKTRDVVSWTAMIDGYLRMNHFIGALALFREMQMSNVKPDEFTMVSILIACALL 295

Query: 426 GAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMI 485
           GA+ LG+WV   +   + +++ +V  AL+DMY KCGN+ +A+++F  M  K + TW TMI
Sbjct: 296 GALELGEWVKTCIDKNSNKNDSFVGNALVDMYFKCGNVRKAKKVFKEMYQKDKFTWTTMI 355

Query: 486 SGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGF 545
            G  ++GHG EAL +FS M+ + + P  +T++ VL AC    +V +G   F +M   HG 
Sbjct: 356 VGLAINGHGEEALAMFSNMIEASVTPDEITYIGVLCAC----MVDKGKSFFTNMTMQHGI 411

Query: 546 KPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASE 605
           KP   HY CMVD+LG  G LE+ALE I  + V+P   VWG+ LGAC +HK+  LA +A++
Sbjct: 412 KPTVTHYGCMVDLLGCVGCLEEALEVIVNMPVKPNSIVWGSPLGACRVHKNVQLADMAAK 471

Query: 606 KLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFT 665
           ++ EL+PEN   +VLL NIY+A + +     VR+++ +R + K PGC+L+E+ G  + F 
Sbjct: 472 QILELEPENGAVYVLLCNIYAASKKWENLCQVRKLMMERGIKKTPGCSLMELNGNVYEFV 531

Query: 666 SGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFG 725
           +GDQ HPQS  IYA LE +   + +AG+  +T     D+ EE+KE  +  HSEKLAIA+ 
Sbjct: 532 AGDQSHPQSKEIYAKLENMMQGLIKAGYSPDTSEVFLDLGEEDKETALYRHSEKLAIAYA 591

Query: 726 LIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           LI++ PG  IRI+KNLR+C+DCH   K +S+   R ++V+D  RFHHF+ G CSC ++W
Sbjct: 592 LISSGPGVTIRIVKNLRMCVDCHHMAKLVSQAYNRELIVKDKTRFHHFRHGSCSCNNFW 650



 Score =  159 bits (403), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 127/487 (26%), Positives = 220/487 (45%), Gaps = 45/487 (9%)

Query: 13  LSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKL-----AHRLSDFKATCYARALFFSI 67
           +SLL+  K+  QL Q H+  I  G  +D     ++     AH   +     YA  +F +I
Sbjct: 11  ISLLEKCKSMYQLKQIHSHTIKMGLSSDPLFRNRVIAFCCAHESGNMN---YAHQVFDTI 67

Query: 68  PKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIG 127
           P P +F++N +I+G+S    P++ +  Y  L   + + PD FT+ F L   +       G
Sbjct: 68  PHPSMFIWNTMIKGYSKISHPENGVSMYL-LMLTSNIKPDRFTFPFSLKGFTRDMALQHG 126

Query: 128 VLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKN 187
             L  HA+  G+ S+LFV  A + ++     V  A KVFD     + V WN M+SG  + 
Sbjct: 127 KELLNHAVKHGFDSNLFVQKAFIHMFSLCGIVDLAHKVFDMGDACEVVTWNIMLSGYNRV 186

Query: 188 CCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYV 247
             F+ S                   +  VL A +++++L  G            H   Y+
Sbjct: 187 KQFKIS------------------KMLLVLSACSKLKDLEWGK-----------HIFKYI 217

Query: 248 LTGLVS-FYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASA 306
             G+V   ++ CGE++ A+ +F ++   D++S  AMI GY        +L LFR++  S 
Sbjct: 218 NGGIVEHMFAACGEMDEAQGVFDNMKTRDVVSWTAMIDGYLRMNHFIGALALFREMQMSN 277

Query: 307 ERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAAR 366
            + +  T+V ++      G L L   + +   K+   ++S V  AL  +Y +   +  A+
Sbjct: 278 VKPDEFTMVSILIACALLGALELGEWVKTCIDKNSNKNDSFVGNALVDMYFKCGNVRKAK 337

Query: 367 KLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLG 426
           K+F E  +K   +W  MI G   NG  EEA+++F  M  + V P+ +T   +L AC    
Sbjct: 338 KVFKEMYQKDKFTWTTMIVGLAINGHGEEALAMFSNMIEASVTPDEITYIGVLCAC---- 393

Query: 427 AISLGK-WVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHK-SEVTWNTM 484
            +  GK +   +      +  +     ++D+    G + EA E+   M  K + + W + 
Sbjct: 394 MVDKGKSFFTNMTMQHGIKPTVTHYGCMVDLLGCVGCLEEALEVIVNMPVKPNSIVWGSP 453

Query: 485 ISGYGLH 491
           +    +H
Sbjct: 454 LGACRVH 460


>gi|357165485|ref|XP_003580399.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Brachypodium distachyon]
          Length = 886

 Score =  428 bits (1101), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 261/790 (33%), Positives = 404/790 (51%), Gaps = 79/790 (10%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           A  LF  +P  D+  +N I+ G+  +    +++  +  +R+     P+ FT+  V+ +  
Sbjct: 111 AVELFGRMPTRDVASWNTIMSGYYQSGQFLNALDIFVSMRQTGDSLPNAFTFGCVMKSCG 170

Query: 120 ACCDRSIGVLLHGHAIVSGYGS--DLFVGAALVDL------------------------- 152
           A     + + L G  ++S + S  D  V  ALVD+                         
Sbjct: 171 ALGWHEVALQLLG--LLSKFDSQDDPDVQTALVDMLVRCGAMDFASKQFSRIKNPTIICR 228

Query: 153 ------YFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGT 206
                 Y K   V  A ++F  MPE+D V WN +IS L K+   ++++ +  DM    G 
Sbjct: 229 NSMLVGYAKSHGVDHALEIFKSMPERDVVSWNMVISALSKSGRVREALDMVVDM-HGKGV 287

Query: 207 WLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAEL 266
             DST+  + L A A +  L  G ++    ++   H   YV + +V  Y+KCG  + A+ 
Sbjct: 288 RPDSTTYTSSLTACARLSSLEWGKQLHVQVIRNLPHIDPYVASAMVELYAKCGCFKEAKR 347

Query: 267 LFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGH 326
           +F  +   + +S   +I G+   G    S+ LF Q+ A    V+   +  LI        
Sbjct: 348 VFSSLRDRNSVSWTVLIGGFLQYGCFSESVELFNQMRAELMAVDQFALATLISGCCNTMD 407

Query: 327 LHLTNCIHSFCLKSG-----IVSNSSV--------------------------LTALSTV 355
           + L + +HS CLKSG     +VSNS +                           T + T 
Sbjct: 408 ICLGSQLHSLCLKSGHTRAVVVSNSLISMYAKCGNLQNAELIFNFMAERDIVSWTGMITA 467

Query: 356 YSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASK-VAPNPVT 414
           YS++  +  AR+ FD+ S +++ +WNAM+  Y Q+G  E+ + ++ +M   K V P+ VT
Sbjct: 468 YSQVGNIAKAREFFDDMSTRNVITWNAMLGAYIQHGAEEDGLKMYSDMLTEKDVIPDWVT 527

Query: 415 VSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMS 474
             ++   CA +GA  LG  +           +  V  A+I MY+KCG I EAR+ FD +S
Sbjct: 528 YVTLFRGCADIGANKLGDQIIGHTVKVGLILDTSVVNAVITMYSKCGRISEARKAFDFLS 587

Query: 475 HKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDE 534
            K  V+WN MI+GY  HG G +A+++F ++L+ G +P  +++++VL  CSH+GLV EG  
Sbjct: 588 RKDLVSWNAMITGYSQHGMGKQAIEIFDDILNKGAKPDYISYVAVLSGCSHSGLVEEGKF 647

Query: 535 IFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIH 594
            F  M  DH   P  EH++CMVD+LGRAG L +A   I  + ++P   VWGALL AC  H
Sbjct: 648 YFDMMKRDHNISPGLEHFSCMVDLLGRAGHLIEAKNLIDEMPMKPTAEVWGALLSACKTH 707

Query: 595 KDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTL 654
            + +LA +A++ LF+LD    G ++LL+ +Y+       +A VR++++ + + K+PG + 
Sbjct: 708 GNNDLAELAAKHLFDLDSPGSGGYMLLAKMYADAGKSDDSAQVRKLMRDKGIKKSPGYSW 767

Query: 655 IEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMK 714
           +EV    HVF + D  HPQ  AI   L++L  K+   G+           E    E+   
Sbjct: 768 MEVNNRVHVFKAEDVSHPQVIAIREKLDELMEKIAHLGYVR--------TESPRSEIH-- 817

Query: 715 VHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFK 774
            HSEKLA+AFG+++      I I+KNLR+C DCHT  K IS VT R  V+RD  RFHHFK
Sbjct: 818 -HSEKLAVAFGIMSLPAWMPIHIMKNLRICDDCHTVIKLISTVTDREFVIRDGVRFHHFK 876

Query: 775 GGVCSCGDYW 784
           GG CSC DYW
Sbjct: 877 GGSCSCMDYW 886



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 140/524 (26%), Positives = 257/524 (49%), Gaps = 42/524 (8%)

Query: 59  YARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAA 118
           +A  +F S+P+ D+  +N++I   S +   + ++     +     + PD+ TY+  L+A 
Sbjct: 243 HALEIFKSMPERDVVSWNMVISALSKSGRVREALDMVVDMH-GKGVRPDSTTYTSSLTAC 301

Query: 119 SACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWN 178
           +       G  LH   I +    D +V +A+V+LY K    K A++VF  + ++++V W 
Sbjct: 302 ARLSSLEWGKQLHVQVIRNLPHIDPYVASAMVELYAKCGCFKEAKRVFSSLRDRNSVSWT 361

Query: 179 SMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLK 238
            +I G ++  CF +S+ +F  M R     +D  ++A ++       ++ LG ++  L LK
Sbjct: 362 VLIGGFLQYGCFSESVELFNQM-RAELMAVDQFALATLISGCCNTMDICLGSQLHSLCLK 420

Query: 239 LGFHDHVYVLTGLVSFYSKCGEVERAELLF-----RDIVR-------------------- 273
            G    V V   L+S Y+KCG ++ AEL+F     RDIV                     
Sbjct: 421 SGHTRAVVVSNSLISMYAKCGNLQNAELIFNFMAERDIVSWTGMITAYSQVGNIAKAREF 480

Query: 274 ------PDLISCNAMISGYTCNGKTESSLRLFRQLLASAERV-NSSTIVGLIPVFYPFGH 326
                  ++I+ NAM+  Y  +G  E  L+++  +L   + + +  T V L       G 
Sbjct: 481 FDDMSTRNVITWNAMLGAYIQHGAEEDGLKMYSDMLTEKDVIPDWVTYVTLFRGCADIGA 540

Query: 327 LHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAG 386
             L + I    +K G++ ++SV+ A+ T+YS+   +  ARK FD  S K L SWNAMI G
Sbjct: 541 NKLGDQIIGHTVKVGLILDTSVVNAVITMYSKCGRISEARKAFDFLSRKDLVSWNAMITG 600

Query: 387 YTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVK-SRNFES 445
           Y+Q+G+ ++AI +F ++      P+ ++  ++LS C+  G +  GK+  +++K   N   
Sbjct: 601 YSQHGMGKQAIEIFDDILNKGAKPDYISYVAVLSGCSHSGLVEEGKFYFDMMKRDHNISP 660

Query: 446 NIYVSTALIDMYAKCGNIVEARELFDLMSHKSEV-TWNTMISGYGLHGHGLEALQLFSEM 504
            +   + ++D+  + G+++EA+ L D M  K     W  ++S    HG+  +  +L ++ 
Sbjct: 661 GLEHFSCMVDLLGRAGHLIEAKNLIDEMPMKPTAEVWGALLSACKTHGNN-DLAELAAKH 719

Query: 505 LHSGIRP--SGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFK 546
           L     P   G   L+ +YA   AG   +  ++ + ++ D G K
Sbjct: 720 LFDLDSPGSGGYMLLAKMYA--DAGKSDDSAQV-RKLMRDKGIK 760



 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 113/492 (22%), Positives = 215/492 (43%), Gaps = 71/492 (14%)

Query: 149 LVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWL 208
           +++ Y K   +  A ++F +MP +D   WN+++SG  ++  F +++ +F  M + G +  
Sbjct: 98  MMNGYAKLGSLSDAVELFGRMPTRDVASWNTIMSGYYQSGQFLNALDIFVSMRQTGDSLP 157

Query: 209 DSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLF 268
           ++ +   V+ +   +    + +++  L  K    D   V T LV    +CG ++ A   F
Sbjct: 158 NAFTFGCVMKSCGALGWHEVALQLLGLLSKFDSQDDPDVQTALVDMLVRCGAMDFASKQF 217

Query: 269 RDIVRPDLISCNAMISGYTCNGKTESSLRLFRQL--------------LASAERV----- 309
             I  P +I  N+M+ GY  +   + +L +F+ +              L+ + RV     
Sbjct: 218 SRIKNPTIICRNSMLVGYAKSHGVDHALEIFKSMPERDVVSWNMVISALSKSGRVREALD 277

Query: 310 ------------NSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYS 357
                       +S+T    +        L     +H   +++    +  V +A+  +Y+
Sbjct: 278 MVVDMHGKGVRPDSTTYTSSLTACARLSSLEWGKQLHVQVIRNLPHIDPYVASAMVELYA 337

Query: 358 RLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSS 417
           +    + A+++F    +++  SW  +I G+ Q G   E++ LF +M+A  +A +   +++
Sbjct: 338 KCGCFKEAKRVFSSLRDRNSVSWTVLIGGFLQYGCFSESVELFNQMRAELMAVDQFALAT 397

Query: 418 ILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKC----------------- 460
           ++S C     I LG  +H L         + VS +LI MYAKC                 
Sbjct: 398 LISGCCNTMDICLGSQLHSLCLKSGHTRAVVVSNSLISMYAKCGNLQNAELIFNFMAERD 457

Query: 461 --------------GNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEML- 505
                         GNI +ARE FD MS ++ +TWN M+  Y  HG   + L+++S+ML 
Sbjct: 458 IVSWTGMITAYSQVGNIAKAREFFDDMSTRNVITWNAMLGAYIQHGAEEDGLKMYSDMLT 517

Query: 506 HSGIRPSGVTFLSVLYACSHAGLVREGDEIFQ-----SMIHDHGFKPLAEHYACMVDILG 560
              + P  VT++++   C+  G  + GD+I        +I D     +      M    G
Sbjct: 518 EKDVIPDWVTYVTLFRGCADIGANKLGDQIIGHTVKVGLILD---TSVVNAVITMYSKCG 574

Query: 561 RAGQLEKALEFI 572
           R  +  KA +F+
Sbjct: 575 RISEARKAFDFL 586



 Score = 96.3 bits (238), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 83/383 (21%), Positives = 158/383 (41%), Gaps = 58/383 (15%)

Query: 55  KATCY--ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYS 112
           K  C+  A+ +F S+   +   + V+I GF        S+  +  +R    +  D F  +
Sbjct: 338 KCGCFKEAKRVFSSLRDRNSVSWTVLIGGFLQYGCFSESVELFNQMRAEL-MAVDQFALA 396

Query: 113 FVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLY------------FKF---- 156
            ++S      D  +G  LH   + SG+   + V  +L+ +Y            F F    
Sbjct: 397 TLISGCCNTMDICLGSQLHSLCLKSGHTRAVVVSNSLISMYAKCGNLQNAELIFNFMAER 456

Query: 157 ---SW------------VKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMV 201
              SW            +  AR+ FD M  ++ + WN+M+   +++   +D + ++ DM+
Sbjct: 457 DIVSWTGMITAYSQVGNIAKAREFFDDMSTRNVITWNAMLGAYIQHGAEEDGLKMYSDML 516

Query: 202 RNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEV 261
                  D  +   +    A++   +LG +I    +K+G      V+  +++ YSKCG +
Sbjct: 517 TEKDVIPDWVTYVTLFRGCADIGANKLGDQIIGHTVKVGLILDTSVVNAVITMYSKCGRI 576

Query: 262 ERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVF 321
             A   F  + R DL+S NAMI+GY+ +G  + ++ +F  +L    + +  + V +    
Sbjct: 577 SEARKAFDFLSRKDLVSWNAMITGYSQHGMGKQAIEIFDDILNKGAKPDYISYVAV---- 632

Query: 322 YPFGHLHLTNCIHSFCLKSG------------IVSNSSVLTALSTVYSRLNEMEAARKLF 369
                  L+ C HS  ++ G            I       + +  +  R   +  A+ L 
Sbjct: 633 -------LSGCSHSGLVEEGKFYFDMMKRDHNISPGLEHFSCMVDLLGRAGHLIEAKNLI 685

Query: 370 DESSEKSLAS-WNAMIAGYTQNG 391
           DE   K  A  W A+++    +G
Sbjct: 686 DEMPMKPTAEVWGALLSACKTHG 708



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 44/180 (24%), Positives = 80/180 (44%), Gaps = 1/180 (0%)

Query: 38  QNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTH 97
           + D+ + T +    S       AR  F  +   ++  +N ++  +  +   +  +  Y+ 
Sbjct: 455 ERDIVSWTGMITAYSQVGNIAKAREFFDDMSTRNVITWNAMLGAYIQHGAEEDGLKMYSD 514

Query: 98  LRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFS 157
           +     + PD  TY  +    +      +G  + GH +  G   D  V  A++ +Y K  
Sbjct: 515 MLTEKDVIPDWVTYVTLFRGCADIGANKLGDQIIGHTVKVGLILDTSVVNAVITMYSKCG 574

Query: 158 WVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVL 217
            +  ARK FD +  KD V WN+MI+G  ++   + +I +F D++ N G   D  S  AVL
Sbjct: 575 RISEARKAFDFLSRKDLVSWNAMITGYSQHGMGKQAIEIFDDIL-NKGAKPDYISYVAVL 633



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 36/113 (31%), Positives = 59/113 (52%), Gaps = 4/113 (3%)

Query: 416 SSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSH 475
           +++L A    GA+S  +    L++    E N+     +++ YAK G++ +A ELF  M  
Sbjct: 64  NTLLHAYLSCGALSDAR---NLLRDEITEPNVITHNIMMNGYAKLGSLSDAVELFGRMPT 120

Query: 476 KSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIR-PSGVTFLSVLYACSHAG 527
           +   +WNT++SGY   G  L AL +F  M  +G   P+  TF  V+ +C   G
Sbjct: 121 RDVASWNTIMSGYYQSGQFLNALDIFVSMRQTGDSLPNAFTFGCVMKSCGALG 173



 Score = 49.7 bits (117), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 45/178 (25%), Positives = 81/178 (45%), Gaps = 8/178 (4%)

Query: 415 VSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELF-DLM 473
           ++  L +C    A++  + +H  + +    S +++   L+  Y  CG + +AR L  D +
Sbjct: 28  LADALRSCGARSALTGARTLHSRLINVGLASVVFLQNTLLHAYLSCGALSDARNLLRDEI 87

Query: 474 SHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGD 533
           +  + +T N M++GY   G   +A++LF  M    +  S  T +S  Y    +G      
Sbjct: 88  TEPNVITHNIMMNGYAKLGSLSDAVELFGRMPTRDV-ASWNTIMSGYY---QSGQFLNAL 143

Query: 534 EIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLA---VEPGPAVWGALL 588
           +IF SM       P A  + C++   G  G  E AL+ +  L+    +  P V  AL+
Sbjct: 144 DIFVSMRQTGDSLPNAFTFGCVMKSCGALGWHEVALQLLGLLSKFDSQDDPDVQTALV 201


>gi|15229194|ref|NP_190540.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75183401|sp|Q9M2Y7.1|PP274_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g49710
 gi|6723416|emb|CAB66909.1| putative protein [Arabidopsis thaliana]
 gi|332645058|gb|AEE78579.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 721

 Score =  428 bits (1101), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 247/666 (37%), Positives = 379/666 (56%), Gaps = 24/666 (3%)

Query: 134 AIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDS 193
           A  S    ++F    +V  Y K S +  AR++FD++P+ DTV +N++ISG      + D+
Sbjct: 65  AFYSTEEPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISG------YADA 118

Query: 194 IWVFGDMV-----RNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVL 248
              F  MV     R  G  +D  +++ ++ A  +   + L  ++ C  +  GF  +  V 
Sbjct: 119 RETFAAMVLFKRMRKLGFEVDGFTLSGLIAACCD--RVDLIKQLHCFSVSGGFDSYSSVN 176

Query: 249 TGLVSFYSKCGEVERAELLF--RDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASA 306
              V++YSK G +  A  +F   D +R D +S N+MI  Y  + +   +L L+++++   
Sbjct: 177 NAFVTYYSKGGLLREAVSVFYGMDELR-DEVSWNSMIVAYGQHKEGAKALALYKEMIFKG 235

Query: 307 ERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRL---NEME 363
            +++  T+  ++       HL      H   +K+G   NS V + L   YS+    + M 
Sbjct: 236 FKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMY 295

Query: 364 AARKLFDESSEKSLASWNAMIAGYTQNG-LTEEAISLFQEMQASKVAPNPVTVSSILSAC 422
            + K+F E     L  WN MI+GY+ N  L+EEA+  F++MQ     P+  +   + SAC
Sbjct: 296 DSEKVFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSAC 355

Query: 423 AQLGAISLGKWVHELVKSRNFESN-IYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTW 481
           + L + S  K +H L    +  SN I V+ ALI +Y K GN+ +AR +FD M   + V++
Sbjct: 356 SNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSF 415

Query: 482 NTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIH 541
           N MI GY  HGHG EAL L+  ML SGI P+ +TF++VL AC+H G V EG E F +M  
Sbjct: 416 NCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKE 475

Query: 542 DHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLAR 601
               +P AEHY+CM+D+LGRAG+LE+A  FI  +  +PG   W ALLGAC  HK+  LA 
Sbjct: 476 TFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAE 535

Query: 602 VASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTP 661
            A+ +L  + P     +V+L+N+Y+  R + + A+VR+ ++ +++ K PGC+ IEV    
Sbjct: 536 RAANELMVMQPLAATPYVMLANMYADARKWEEMASVRKSMRGKRIRKKPGCSWIEVKKKK 595

Query: 662 HVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTAL---HDVEEEEKELMMKVHSE 718
           HVF + D  HP    +   LE++  KM++ G+  +   A+    +  E ++E+ +  HSE
Sbjct: 596 HVFVAEDWSHPMIREVNEYLEEMMKKMKKVGYVMDKKWAMVKEDEAGEGDEEMRLGHHSE 655

Query: 719 KLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVC 778
           KLA+AFGL++T  G E+ ++KNLR+C DCH A KF+S V GR I+VRD  RFH FK G C
Sbjct: 656 KLAVAFGLMSTRDGEELVVVKNLRICGDCHNAIKFMSAVAGREIIVRDNLRFHCFKDGKC 715

Query: 779 SCGDYW 784
           SCGDYW
Sbjct: 716 SCGDYW 721



 Score =  196 bits (498), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 144/491 (29%), Positives = 240/491 (48%), Gaps = 41/491 (8%)

Query: 41  LSTVTKLAHRLSDFKATC----YARALFFSIPKPDLFLFNVIIRGFSN-----------N 85
           +++ T L++   +  + C    YARA F+S  +P++F +NVI++ ++            +
Sbjct: 39  VASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEPNVFSYNVIVKAYAKDSKIHIARQLFD 98

Query: 86  EMPKSSICFYTHLRKNTALTPDNFTY---------------SFVLSA-ASACCDR-SIGV 128
           E+P+     Y  L    A   + F                  F LS   +ACCDR  +  
Sbjct: 99  EIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVDGFTLSGLIAACCDRVDLIK 158

Query: 129 LLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPE-KDTVLWNSMISGLMKN 187
            LH  ++  G+ S   V  A V  Y K   ++ A  VF  M E +D V WNSMI    ++
Sbjct: 159 QLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDELRDEVSWNSMIVAYGQH 218

Query: 188 CCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYV 247
                ++ ++ +M+  G   +D  ++A+VL A+  +  L  G +     +K GFH + +V
Sbjct: 219 KEGAKALALYKEMIFKGFK-IDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHV 277

Query: 248 LTGLVSFYSKCGEVE---RAELLFRDIVRPDLISCNAMISGYTCNGK-TESSLRLFRQLL 303
            +GL+ FYSKCG  +    +E +F++I+ PDL+  N MISGY+ N + +E +++ FRQ+ 
Sbjct: 278 GSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQ 337

Query: 304 ASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNS-SVLTALSTVYSRLNEM 362
               R +  + V +               IH   +KS I SN  SV  AL ++Y +   +
Sbjct: 338 RIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNL 397

Query: 363 EAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSAC 422
           + AR +FD   E +  S+N MI GY Q+G   EA+ L+Q M  S +APN +T  ++LSAC
Sbjct: 398 QDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSAC 457

Query: 423 AQLGAISLGK-WVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHK-SEVT 480
           A  G +  G+ + + + ++   E      + +ID+  + G + EA    D M +K   V 
Sbjct: 458 AHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVA 517

Query: 481 WNTMISGYGLH 491
           W  ++     H
Sbjct: 518 WAALLGACRKH 528



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 106/377 (28%), Positives = 170/377 (45%), Gaps = 39/377 (10%)

Query: 203 NGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCG--- 259
           N   W   T    +L +VAE ++L  G  +  L +K       Y+    V+ YSKCG   
Sbjct: 2   NQTPWKFKTFRDLLLKSVAE-RDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLS 60

Query: 260 ----------------------------EVERAELLFRDIVRPDLISCNAMISGYTCNGK 291
                                       ++  A  LF +I +PD +S N +ISGY    +
Sbjct: 61  YARAAFYSTEEPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARE 120

Query: 292 TESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTA 351
           T +++ LF+++      V+  T+ GLI        + L   +H F +  G  S SSV  A
Sbjct: 121 TFAAMVLFKRMRKLGFEVDGFTLSGLIAA--CCDRVDLIKQLHCFSVSGGFDSYSSVNNA 178

Query: 352 LSTVYSRLNEMEAARKLFDESSE-KSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAP 410
             T YS+   +  A  +F    E +   SWN+MI  Y Q+    +A++L++EM       
Sbjct: 179 FVTYYSKGGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKI 238

Query: 411 NPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCG---NIVEAR 467
           +  T++S+L+A   L  +  G+  H  +    F  N +V + LID Y+KCG    + ++ 
Sbjct: 239 DMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSE 298

Query: 468 ELFDLMSHKSEVTWNTMISGYGLHGH-GLEALQLFSEMLHSGIRPSGVTFLSVLYACSHA 526
           ++F  +     V WNTMISGY ++     EA++ F +M   G RP   +F+ V  ACS+ 
Sbjct: 299 KVFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNL 358

Query: 527 GLVREGDEIFQSMIHDH 543
               +  +I    I  H
Sbjct: 359 SSPSQCKQIHGLAIKSH 375


>gi|147780607|emb|CAN69113.1| hypothetical protein VITISV_031840 [Vitis vinifera]
          Length = 714

 Score =  428 bits (1101), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 212/535 (39%), Positives = 324/535 (60%), Gaps = 1/535 (0%)

Query: 251 LVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLF-RQLLASAERV 309
           LVS Y K G  E A+ LF ++   DL+S N+++SG +  G   + L  F R    S  + 
Sbjct: 180 LVSMYFKLGYDEDAQRLFDEMPNRDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQP 239

Query: 310 NSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLF 369
           N  T++ ++      G L     +H   +K G+   + V+ +L  +Y +L  ++AA +LF
Sbjct: 240 NEVTLLSVVSACAXMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLF 299

Query: 370 DESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAIS 429
           +E   +SL SWN+M+  +  NG  E+ + LF  M+ + + P+  T+ ++L AC   G   
Sbjct: 300 EEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTGLGR 359

Query: 430 LGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYG 489
             + +H  +    F ++I ++TAL+++YAK G +  + ++F+ +  +  + W  M++GY 
Sbjct: 360 QAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIFEEIKDRDTIAWTAMLAGYA 419

Query: 490 LHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLA 549
           +H  G EA++LF  M+  G+    VTF  +L ACSH+GLV EG + F+ M   +  +P  
Sbjct: 420 VHACGREAIKLFDLMVKEGVEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVYRVEPRL 479

Query: 550 EHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFE 609
           +HY+CMVD+LGR+G+LE A E IK + +EP   VWGALLGAC ++ +  L +  +E+L  
Sbjct: 480 DHYSCMVDLLGRSGRLEDAYELIKSMPMEPSSGVWGALLGACRVYGNVELGKEVAEQLLS 539

Query: 610 LDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQ 669
           LDP +   +++LSNIYSA   +  A+ VR ++K+R+L + PGC+ IE G   H F  GDQ
Sbjct: 540 LDPSDHRNYIMLSNIYSAAGLWRXASKVRXLMKERRLTRNPGCSFIEHGNKIHRFVVGDQ 599

Query: 670 LHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIAT 729
           LHP+S  I+  LE+L  K+ EAG   +T   LHD++EE K  M+  HSEKLAIAFGL+ T
Sbjct: 600 LHPRSDEIHTKLEELIRKIXEAGCAPKTEFVLHDIDEEVKVDMINKHSEKLAIAFGLLVT 659

Query: 730 EPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
             G  + I KNLR+C DCH+  KF S +  R I++RD+ RFHHF  G+CSC DYW
Sbjct: 660 GSGVPLIITKNLRICGDCHSTAKFASLLEKRTIIIRDSKRFHHFADGLCSCRDYW 714



 Score =  172 bits (437), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 126/458 (27%), Positives = 221/458 (48%), Gaps = 10/458 (2%)

Query: 83  SNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSD 142
           S+N+  ++ +  +     N++L  D+   S V  A S+C   S    +H   I S   SD
Sbjct: 115 SSNDSTRTKVAVFLGKLHNSSLLADSIVQSLVF-AISSCTSVSYCSAIHARVIKSLNYSD 173

Query: 143 LFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVR 202
            F+G  LV +YFK  + + A+++FD+MP +D V WNS++SGL         +  F  M  
Sbjct: 174 GFIGDRLVSMYFKLGYDEDAQRLFDEMPNRDLVSWNSLMSGLSGRGYLGACLNAFCRMRT 233

Query: 203 NGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVE 262
             G   +  ++ +V+ A A +  L  G  +  + +KLG      V+  L++ Y K G ++
Sbjct: 234 ESGRQPNEVTLLSVVSACAXMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLD 293

Query: 263 RAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFY 322
            A  LF ++    L+S N+M+  +  NG  E  + LF  +  +    + +T+V L+    
Sbjct: 294 AASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLRACT 353

Query: 323 PFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNA 382
             G       IH++  + G  ++  + TAL  +Y++L  + A+  +F+E  ++   +W A
Sbjct: 354 DTGLGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIFEEIKDRDTIAWTA 413

Query: 383 MIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKS-R 441
           M+AGY  +    EAI LF  M    V  + VT + +LSAC+  G +  GK   E++    
Sbjct: 414 MLAGYAVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVY 473

Query: 442 NFESNIYVSTALIDMYAKCGNIVEARELFDLMS-HKSEVTWNTMISGYGLHGHGLEALQL 500
             E  +   + ++D+  + G + +A EL   M    S   W  ++    ++G+ +E  + 
Sbjct: 474 RVEPRLDHYSCMVDLLGRSGRLEDAYELIKSMPMEPSSGVWGALLGACRVYGN-VELGKE 532

Query: 501 FSEMLHSGIRPS---GVTFLSVLYACSHAGLVREGDEI 535
            +E L S + PS       LS +Y  S AGL R   ++
Sbjct: 533 VAEQLLS-LDPSDHRNYIMLSNIY--SAAGLWRXASKV 567



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 102/418 (24%), Positives = 184/418 (44%), Gaps = 42/418 (10%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           A+ LF  +P  DL  +N ++ G S      + +  +  +R  +   P+  T   V+SA +
Sbjct: 193 AQRLFDEMPNRDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSACA 252

Query: 120 ACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNS 179
                  G  LHG  +  G      V  +L+++Y K  ++ +A ++F++MP +  V WNS
Sbjct: 253 XMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSWNS 312

Query: 180 MISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKL 239
           M+     N   +  + +F ++++  G   D  ++ A+L A  +    R    I     + 
Sbjct: 313 MVVIHNHNGYAEKGMDLF-NLMKRAGINPDQATMVALLRACTDTGLGRQAESIHAYIHRC 371

Query: 240 GFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLF 299
           GF+  + + T L++ Y+K G +  +E +F +I   D I+  AM++GY  +     +++LF
Sbjct: 372 GFNADIIIATALLNLYAKLGRLNASEDIFEEIKDRDTIAWTAMLAGYAVHACGREAIKLF 431

Query: 300 RQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRL 359
             ++     V+  T          F HL L+ C HS  ++ G          +S VY   
Sbjct: 432 DLMVKEGVEVDHVT----------FTHL-LSACSHSGLVEEG----KKYFEIMSEVY--- 473

Query: 360 NEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSIL 419
                         E  L  ++ M+    ++G  E+A  L + M    + P+     ++L
Sbjct: 474 ------------RVEPRLDHYSCMVDLLGRSGRLEDAYELIKSM---PMEPSSGVWGALL 518

Query: 420 SACAQLGAISLGKWVHELVKS------RNF--ESNIYVSTALIDMYAKCGNIVEAREL 469
            AC   G + LGK V E + S      RN+   SNIY +  L    +K   +++ R L
Sbjct: 519 GACRVYGNVELGKEVAEQLLSLDPSDHRNYIMLSNIYSAAGLWRXASKVRXLMKERRL 576


>gi|302768409|ref|XP_002967624.1| hypothetical protein SELMODRAFT_169299 [Selaginella moellendorffii]
 gi|300164362|gb|EFJ30971.1| hypothetical protein SELMODRAFT_169299 [Selaginella moellendorffii]
          Length = 795

 Score =  428 bits (1100), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 243/689 (35%), Positives = 378/689 (54%), Gaps = 9/689 (1%)

Query: 102 TALTPDNFTYSFVLSAASACCDRSI--GVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWV 159
           + ++PD  T++ +L   S   +R++  G  +H H + +GY  D  V   +V++Y K   V
Sbjct: 110 SGVSPDRITFTSILLKWSGR-ERNLDEGKRVHSHIMQTGYEGDRMVMNLVVEMYGKCGDV 168

Query: 160 KSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPA 219
           + A  VFD + + +   W  +I+   +N    + + +   M    G   D  +   VL A
Sbjct: 169 EQAGNVFDSIQDPNVFSWTIIIAAYAQNGHCMEVLRLLSRM-NQAGVKPDGYTFTTVLGA 227

Query: 220 VAEVQELRLGMEIQCLGLK-LGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLIS 278
              V  L     +    +   G      V T L++ Y KCG +E A  +F  I   D++S
Sbjct: 228 CTAVGALEEAKILHAATISSTGLDRDAAVGTALINLYGKCGALEEAFGVFVQIDNKDIVS 287

Query: 279 CNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCL 338
            ++MI+ +  +G+ +S+++L   +     R N+ T V ++              IH+  +
Sbjct: 288 WSSMIAAFAQSGQAKSAIQLLMLMDLEGVRPNNVTFVNVLEAVTSLKAFQYGKEIHARIV 347

Query: 339 KSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAIS 398
           ++G   +  + +AL  +Y     +E AR +F+ S E+ + SW++MIAGY+QN     A+S
Sbjct: 348 QAGYSDDVCLTSALVKMYCNWGWVETARSIFESSRERDVVSWSSMIAGYSQNESPARALS 407

Query: 399 LFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYA 458
           LF+EM+   V PN VT  S + ACA +GA+  G  +HE V+    + ++ V+TAL+++Y 
Sbjct: 408 LFREMEVDGVQPNSVTFVSAIDACAGVGALRRGTQLHERVRCLGLDKDVPVATALVNLYG 467

Query: 459 KCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLS 518
           KCG + EA  +F  M  K+ +TW ++   YG +GHG  +L+L   M   G++P G+ F++
Sbjct: 468 KCGRLEEAEAVFLGMKKKNLLTWTSIAMAYGQNGHGSRSLKLLHGMELQGMKPDGIVFVA 527

Query: 519 VLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVE 578
           +L +C++AG + +G   +  M  D G  P  EH  CMVDILGRAG+LE A + I  +  E
Sbjct: 528 ILVSCNYAGQMSKGLHYYNLMTQDFGIAPAVEHCGCMVDILGRAGKLEAAEQLINTMKFE 587

Query: 579 PGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVR 638
              A W  LL AC  H DT  A  A+EK+F+L+P+N   +VLLS+++ A   +  A   R
Sbjct: 588 SSLA-WMMLLTACKAHNDTARAARAAEKIFQLEPKNATPYVLLSSVFCAAGSWEAAEETR 646

Query: 639 QVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTA--IYAMLEKLNGKMREAGFQTE 696
           + +  R + +  G + IE+G   H F +   + P      I+A LEKL  +M+ AG+  +
Sbjct: 647 RRMDGRGVQRLLGRSSIEIGDRVHEFVAASDVLPHHLVGEIFAALEKLGREMQGAGYVPD 706

Query: 697 -TVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFIS 755
            T   L DVEE  KE  +  HSE LA+  G+I+T  GT +RI KNLR+C DCH ATKF+S
Sbjct: 707 ATAVRLRDVEEGGKENAVPYHSEMLALGLGIISTPAGTPLRITKNLRMCSDCHIATKFVS 766

Query: 756 KVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           K+  R I VRD  R HHF+ GVCSCGDYW
Sbjct: 767 KLVHRRISVRDGRRHHHFENGVCSCGDYW 795



 Score =  193 bits (491), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 118/428 (27%), Positives = 212/428 (49%), Gaps = 2/428 (0%)

Query: 149 LVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWL 208
           ++ +Y +      A  VFD+M +++ V W S+IS       F D++ +F  M+ +G +  
Sbjct: 56  VIQMYLRCGCTDLALDVFDRMKDQNVVAWTSLISAFTFAGHFGDAMVLFRKMLLSGVSPD 115

Query: 209 DSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLF 268
             T  + +L      + L  G  +    ++ G+     V+  +V  Y KCG+VE+A  +F
Sbjct: 116 RITFTSILLKWSGRERNLDEGKRVHSHIMQTGYEGDRMVMNLVVEMYGKCGDVEQAGNVF 175

Query: 269 RDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLH 328
             I  P++ S   +I+ Y  NG     LRL  ++  +  + +  T   ++      G L 
Sbjct: 176 DSIQDPNVFSWTIIIAAYAQNGHCMEVLRLLSRMNQAGVKPDGYTFTTVLGACTAVGALE 235

Query: 329 LTNCIHSFCLKS-GIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGY 387
               +H+  + S G+  +++V TAL  +Y +   +E A  +F +   K + SW++MIA +
Sbjct: 236 EAKILHAATISSTGLDRDAAVGTALINLYGKCGALEEAFGVFVQIDNKDIVSWSSMIAAF 295

Query: 388 TQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNI 447
            Q+G  + AI L   M    V PN VT  ++L A   L A   GK +H  +    +  ++
Sbjct: 296 AQSGQAKSAIQLLMLMDLEGVRPNNVTFVNVLEAVTSLKAFQYGKEIHARIVQAGYSDDV 355

Query: 448 YVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHS 507
            +++AL+ MY   G +  AR +F+    +  V+W++MI+GY  +     AL LF EM   
Sbjct: 356 CLTSALVKMYCNWGWVETARSIFESSRERDVVSWSSMIAGYSQNESPARALSLFREMEVD 415

Query: 508 GIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEK 567
           G++P+ VTF+S + AC+  G +R G ++ +  +   G          +V++ G+ G+LE+
Sbjct: 416 GVQPNSVTFVSAIDACAGVGALRRGTQLHER-VRCLGLDKDVPVATALVNLYGKCGRLEE 474

Query: 568 ALEFIKGL 575
           A     G+
Sbjct: 475 AEAVFLGM 482



 Score = 79.3 bits (194), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 58/197 (29%), Positives = 96/197 (48%), Gaps = 14/197 (7%)

Query: 403 MQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTAL-----IDMY 457
           M+A ++       ++IL+AC+ L A+  GK VH LV   +   +     +L     I MY
Sbjct: 1   MEAREIQAEISACAAILTACSDLRALPEGKRVHGLVMRESLLQDERPDESLLENIVIQMY 60

Query: 458 AKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFL 517
            +CG    A ++FD M  ++ V W ++IS +   GH  +A+ LF +ML SG+ P  +TF 
Sbjct: 61  LRCGCTDLALDVFDRMKDQNVVAWTSLISAFTFAGHFGDAMVLFRKMLLSGVSPDRITFT 120

Query: 518 SVLYACSHAGLVREGDEIFQSMIHDH----GFKPLAEHYACMVDILGRAGQLEKALEFIK 573
           S+L   S  G  R  DE     +H H    G++        +V++ G+ G +E+A     
Sbjct: 121 SILLKWS--GRERNLDE--GKRVHSHIMQTGYEGDRMVMNLVVEMYGKCGDVEQAGNVFD 176

Query: 574 GLAVEPGPAVWGALLGA 590
            +  +P    W  ++ A
Sbjct: 177 SIQ-DPNVFSWTIIIAA 192



 Score = 66.2 bits (160), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 40/161 (24%), Positives = 77/161 (47%), Gaps = 1/161 (0%)

Query: 27  QTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNE 86
           + HA+I+  G+ +D+   + L     ++     AR++F S  + D+  ++ +I G+S NE
Sbjct: 341 EIHARIVQAGYSDDVCLTSALVKMYCNWGWVETARSIFESSRERDVVSWSSMIAGYSQNE 400

Query: 87  MPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVG 146
            P  ++  +  +  +  + P++ T+   + A +       G  LH      G   D+ V 
Sbjct: 401 SPARALSLFREMEVD-GVQPNSVTFVSAIDACAGVGALRRGTQLHERVRCLGLDKDVPVA 459

Query: 147 AALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKN 187
            ALV+LY K   ++ A  VF  M +K+ + W S+     +N
Sbjct: 460 TALVNLYGKCGRLEEAEAVFLGMKKKNLLTWTSIAMAYGQN 500


>gi|297816218|ref|XP_002875992.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297321830|gb|EFH52251.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 721

 Score =  428 bits (1100), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 243/653 (37%), Positives = 377/653 (57%), Gaps = 14/653 (2%)

Query: 142 DLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMV 201
           ++F    +V  Y K S +  AR++FD+ P+ DTV +N++ISG         ++ +F  M 
Sbjct: 73  NVFSYNVIVKAYAKDSKIHIARQLFDENPQPDTVSYNTLISGYADARETVAAMVLFKRM- 131

Query: 202 RNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEV 261
           R  G  +D  +++ ++ A  +   + L  ++ C  +  GF  +  V    V++YSK G +
Sbjct: 132 RELGFEVDGFTLSGLIAACCD--RVDLIKQLHCFAVSGGFDSYSSVNNAFVTYYSKGGLL 189

Query: 262 ERAELLF--RDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIP 319
             A  +F   D +R D +S N+MI  Y  + +   +L L+++++    +++  T+  ++ 
Sbjct: 190 REAVSVFYGMDGLR-DEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLN 248

Query: 320 VFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRL---NEMEAARKLFDESSEKS 376
                 HL      H   +K+G   NS V + L   YS+    + M  + K+F E     
Sbjct: 249 ALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGRDGMSDSEKVFQEILSPD 308

Query: 377 LASWNAMIAGYTQNGL-TEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVH 435
           L  WN MI+GY+ N   +EEA+  F++MQ     P+  +   + SAC+ L + S GK +H
Sbjct: 309 LVLWNTMISGYSMNEEHSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQGKQIH 368

Query: 436 ELVKSRNFESN-IYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHG 494
            L    N  SN I V+ ALI +Y K GN+++AR +FD M   + V++N MI GY  HGHG
Sbjct: 369 GLAIKSNIPSNRISVNNALISLYYKSGNLLDARRVFDRMPELNAVSFNCMIKGYAQHGHG 428

Query: 495 LEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYAC 554
            EAL+L+  ML SGI P+ +TF+++L AC+H G V EG + F +M      +P AEHY+C
Sbjct: 429 TEALRLYQRMLDSGIAPNNITFVAILSACAHCGKVDEGQKYFNTMKETFKIEPEAEHYSC 488

Query: 555 MVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPEN 614
           M+D+LGRAG+LE+A  FI  +  +PG   W ALLGAC  HK+  LA  A+++L  + P  
Sbjct: 489 MIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAAKELMVMQPLA 548

Query: 615 VGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQS 674
              +V+L+N+Y+    + + A+VR+ ++ +++ K PGC+ IEV    HVF + D  HP  
Sbjct: 549 ATPYVMLANMYADAGKWEEMASVRKSMRGKRIRKKPGCSWIEVKKKKHVFVAEDWSHPMI 608

Query: 675 TAIYAMLEKLNGKMREAGFQTETVTAL---HDVEEEEKELMMKVHSEKLAIAFGLIATEP 731
             +   LE++  KM++ G+  +   A+    +  E E+E+ +  HSEKLA+AFGL++T  
Sbjct: 609 REVNEYLEEMMKKMKKVGYVMDKKWAMVKEDEAGEGEEEMRLGHHSEKLAVAFGLMSTRD 668

Query: 732 GTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           G EI ++KNLR+C DCH A KF+S V GR I+VRD  RFH FK G CSCGDYW
Sbjct: 669 GEEIVVVKNLRICGDCHNAIKFMSAVAGREIIVRDNLRFHCFKDGKCSCGDYW 721



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 158/543 (29%), Positives = 260/543 (47%), Gaps = 50/543 (9%)

Query: 41  LSTVTKLAHRLSDFKATC----YARALFFSIPKPDLFLFNVIIRGFSN-----------N 85
           +++ T L++   +  + C    YARA F S  +P++F +NVI++ ++            +
Sbjct: 39  VASSTYLSNHFVNLYSKCGCLSYARAAFDSTEEPNVFSYNVIVKAYAKDSKIHIARQLFD 98

Query: 86  EMPKSSICFYTHL-------RKNTA------------LTPDNFTYSFVLSAASACCDR-S 125
           E P+     Y  L       R+  A               D FT S ++   +ACCDR  
Sbjct: 99  ENPQPDTVSYNTLISGYADARETVAAMVLFKRMRELGFEVDGFTLSGLI---AACCDRVD 155

Query: 126 IGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPE-KDTVLWNSMISGL 184
           +   LH  A+  G+ S   V  A V  Y K   ++ A  VF  M   +D V WNSMI   
Sbjct: 156 LIKQLHCFAVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDGLRDEVSWNSMIVAY 215

Query: 185 MKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDH 244
            ++     ++ ++ +M+  G   +D  ++A+VL A+  +  L  G +     +K GFH +
Sbjct: 216 GQHKEGAKALALYKEMIFKGFK-IDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQN 274

Query: 245 VYVLTGLVSFYSKCG---EVERAELLFRDIVRPDLISCNAMISGYTCNGK-TESSLRLFR 300
            +V +GL+ FYSKCG    +  +E +F++I+ PDL+  N MISGY+ N + +E +++ FR
Sbjct: 275 SHVGSGLIDFYSKCGGRDGMSDSEKVFQEILSPDLVLWNTMISGYSMNEEHSEEAVKSFR 334

Query: 301 QLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNS-SVLTALSTVYSRL 359
           Q+     R +  + V +               IH   +KS I SN  SV  AL ++Y + 
Sbjct: 335 QMQRIGHRPDDCSFVCVTSACSNLSSPSQGKQIHGLAIKSNIPSNRISVNNALISLYYKS 394

Query: 360 NEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSIL 419
             +  AR++FD   E +  S+N MI GY Q+G   EA+ L+Q M  S +APN +T  +IL
Sbjct: 395 GNLLDARRVFDRMPELNAVSFNCMIKGYAQHGHGTEALRLYQRMLDSGIAPNNITFVAIL 454

Query: 420 SACAQLGAISLG-KWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHK-S 477
           SACA  G +  G K+ + + ++   E      + +ID+  + G + EA    D M +K  
Sbjct: 455 SACAHCGKVDEGQKYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPG 514

Query: 478 EVTWNTMISGYGLHGHGLEALQLFSE-MLHSGIRPSGVTFLSVLYACSHAGLVREGDEIF 536
            V W  ++     H +   A +   E M+   +  +    L+ +YA   AG   E   + 
Sbjct: 515 SVAWAALLGACRKHKNMALAERAAKELMVMQPLAATPYVMLANMYA--DAGKWEEMASVR 572

Query: 537 QSM 539
           +SM
Sbjct: 573 KSM 575



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 61/222 (27%), Positives = 100/222 (45%), Gaps = 34/222 (15%)

Query: 333 IHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSL--------------- 377
           +H+  +KS + S++ +      +YS+   +  AR  FD + E ++               
Sbjct: 30  LHALYVKSIVASSTYLSNHFVNLYSKCGCLSYARAAFDSTEEPNVFSYNVIVKAYAKDSK 89

Query: 378 ----------------ASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSA 421
                            S+N +I+GY     T  A+ LF+ M+      +  T+S +++A
Sbjct: 90  IHIARQLFDENPQPDTVSYNTLISGYADARETVAAMVLFKRMRELGFEVDGFTLSGLIAA 149

Query: 422 CAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSH-KSEVT 480
           C     + L K +H    S  F+S   V+ A +  Y+K G + EA  +F  M   + EV+
Sbjct: 150 CCD--RVDLIKQLHCFAVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDGLRDEVS 207

Query: 481 WNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYA 522
           WN+MI  YG H  G +AL L+ EM+  G +    T  SVL A
Sbjct: 208 WNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNA 249



 Score = 53.1 bits (126), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 39/154 (25%), Positives = 63/154 (40%), Gaps = 5/154 (3%)

Query: 444 ESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSE 503
           E N++    ++  YAK   I  AR+LFD       V++NT+ISGY      + A+ LF  
Sbjct: 71  EPNVFSYNVIVKAYAKDSKIHIARQLFDENPQPDTVSYNTLISGYADARETVAAMVLFKR 130

Query: 504 MLHSGIRPSGVTFLSVLYA-CSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRA 562
           M   G    G T   ++ A C    L+++            GF   +      V    + 
Sbjct: 131 MRELGFEVDGFTLSGLIAACCDRVDLIKQ----LHCFAVSGGFDSYSSVNNAFVTYYSKG 186

Query: 563 GQLEKALEFIKGLAVEPGPAVWGALLGACMIHKD 596
           G L +A+    G+        W +++ A   HK+
Sbjct: 187 GLLREAVSVFYGMDGLRDEVSWNSMIVAYGQHKE 220


>gi|297834380|ref|XP_002885072.1| hypothetical protein ARALYDRAFT_318289 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297330912|gb|EFH61331.1| hypothetical protein ARALYDRAFT_318289 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1134

 Score =  428 bits (1100), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 237/656 (36%), Positives = 363/656 (55%), Gaps = 9/656 (1%)

Query: 136  VSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIW 195
            +SG G +L     L+D+Y K      A KVFD MPE++ V W +++SG + N     S+ 
Sbjct: 397  LSGSGLNLITSNYLIDMYCKCREQLIAYKVFDSMPERNVVSWTALMSGHVLNGDLNGSLS 456

Query: 196  VFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFY 255
            +F +M R G  + +  + +  L A   +  L  G++I    LK+GF   V V   LV  Y
Sbjct: 457  LFTEMGRQG-IYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMY 515

Query: 256  SKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASA--ERVNSST 313
            SKCG +  AE +FR +V   LIS NAMI+GY   G    +L  F  +  +   ER +  T
Sbjct: 516  SKCGRINEAEKVFRWMVGRSLISWNAMIAGYVHAGYGSRALATFGMMQEAKIKERPDEFT 575

Query: 314  IVGLIPVFYPFGHLHLTNCIHSFCLKSGI--VSNSSVLTALSTVYSRLNEMEAARKLFDE 371
            +  L+      G ++    IH F ++SG    S++++  +L  +Y +   + +ARK FD+
Sbjct: 576  LTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGNLFSARKAFDQ 635

Query: 372  SSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLG 431
              EK++ SW+++I GY Q G   EA+ LF+ +Q      +   +SSI+   A    +  G
Sbjct: 636  IKEKTMISWSSLILGYAQEGDFVEAMGLFKRLQELSSQIDSFVLSSIIGVFADFALLQQG 695

Query: 432  KWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLH 491
            K +  LV          VS +L+DMY KCG + EA + F  M  K  ++W  MI+GYG H
Sbjct: 696  KQMQALVVKLPSGLETSVSNSLVDMYLKCGLVDEAEKCFAEMQLKDVISWTVMITGYGKH 755

Query: 492  GHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEH 551
            G G +A+ +F++ML   I P  V +L+VL ACSH+G+++EG+E+F  ++   G KP  EH
Sbjct: 756  GLGKKAVSIFNKMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETQGIKPRVEH 815

Query: 552  YACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELD 611
            YAC+VD+LGRAG+L++A   +  + ++P   +W  LL  C +H D  L +   + L  +D
Sbjct: 816  YACVVDLLGRAGRLKEAKHLVDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRID 875

Query: 612  PENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLH 671
             +N   +V++SN+Y     + +    R++   + L K  G + +E+    H F SG+  H
Sbjct: 876  GKNPANYVMMSNLYGQAGYWNEQGNARELGSIKGLQKEAGMSWVEIEREVHFFRSGEDSH 935

Query: 672  PQSTAIYAMLEKLNGKMREA-GFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIA-- 728
            P +  I   L+++  ++RE  G+       LHD+++E KE  ++ HSEKLAI   L    
Sbjct: 936  PLTLVIQETLKEVERRLREELGYVYGLKHELHDIDDESKEENLRAHSEKLAIGLALATGG 995

Query: 729  -TEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDY 783
              + G  IR+ KNLRVC+DCH   K +SK+T    VVRDA RFH F+ G CSCGDY
Sbjct: 996  LNQKGKTIRVFKNLRVCVDCHEFIKGLSKITKIAYVVRDAVRFHSFEDGCCSCGDY 1051



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 123/471 (26%), Positives = 223/471 (47%), Gaps = 11/471 (2%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           A  +F S+P+ ++  +  ++ G   N     S+  +T + +   + P+ FT+S  L A  
Sbjct: 423 AYKVFDSMPERNVVSWTALMSGHVLNGDLNGSLSLFTEMGRQ-GIYPNEFTFSTNLKACG 481

Query: 120 ACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNS 179
                  G+ +HG  +  G+   + VG +LVD+Y K   +  A KVF  M  +  + WN+
Sbjct: 482 LLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRWMVGRSLISWNA 541

Query: 180 MISGLMKNCCFQDSIWVFGDMVRNG-GTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLK 238
           MI+G +       ++  FG M         D  ++ ++L A +    +  G +I    ++
Sbjct: 542 MIAGYVHAGYGSRALATFGMMQEAKIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVR 601

Query: 239 LGFH--DHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSL 296
            GFH      +   LV  Y KCG +  A   F  I    +IS +++I GY   G    ++
Sbjct: 602 SGFHCPSSATITGSLVDLYVKCGNLFSARKAFDQIKEKTMISWSSLILGYAQEGDFVEAM 661

Query: 297 RLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVY 356
            LF++L   + +++S  +  +I VF  F  L     + +  +K      +SV  +L  +Y
Sbjct: 662 GLFKRLQELSSQIDSFVLSSIIGVFADFALLQQGKQMQALVVKLPSGLETSVSNSLVDMY 721

Query: 357 SRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVS 416
            +   ++ A K F E   K + SW  MI GY ++GL ++A+S+F +M    + P+ V   
Sbjct: 722 LKCGLVDEAEKCFAEMQLKDVISWTVMITGYGKHGLGKKAVSIFNKMLRHNIEPDEVCYL 781

Query: 417 SILSACAQLGAISLGKWV-HELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSH 475
           ++LSAC+  G I  G+ +  +L++++  +  +     ++D+  + G + EA+ L D M  
Sbjct: 782 AVLSACSHSGMIKEGEELFSKLLETQGIKPRVEHYACVVDLLGRAGRLKEAKHLVDTMPI 841

Query: 476 KSEV-TWNTMISGYGLHGH---GLEALQLFSEMLHSGIRPSGVTFLSVLYA 522
           K  V  W T++S   +HG    G E  ++   +   G  P+    +S LY 
Sbjct: 842 KPNVGIWQTLLSLCRVHGDIELGKEVGKILLRI--DGKNPANYVMMSNLYG 890


>gi|302753382|ref|XP_002960115.1| hypothetical protein SELMODRAFT_70183 [Selaginella moellendorffii]
 gi|300171054|gb|EFJ37654.1| hypothetical protein SELMODRAFT_70183 [Selaginella moellendorffii]
          Length = 653

 Score =  428 bits (1100), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 227/654 (34%), Positives = 372/654 (56%), Gaps = 32/654 (4%)

Query: 162 ARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVA 221
           AR+VFD++ +++   W+ ++   ++N  +Q+++ V+ +MVR   + +D+ ++++VL A  
Sbjct: 1   ARQVFDRIKQRNAFSWSILVECYVQNAMYQEALEVYKEMVREEIS-IDAYTLSSVLAACT 59

Query: 222 EVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFR------DIVR-- 273
           ++ ++  G  +Q    +LGF   V V T L+  ++KCG +E AE +FR      DI+   
Sbjct: 60  KLLDVEEGRMVQRKAEELGFEKDVVVATSLIHLFAKCGCLEEAESVFRSMGAMRDIISVT 119

Query: 274 ----------------------PDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNS 311
                                  D++S NAMI+ YT  G  + +  LF ++       + 
Sbjct: 120 AMIGAYCGSLKDSKSLFLTMDVKDVVSWNAMIAAYTLYGHDKDAFSLFHRMCTLGHTPDI 179

Query: 312 STIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDE 371
            T   ++        L     +H      G   + ++   L ++Y+R   +E+AR+ F  
Sbjct: 180 YTFSSILGACASPKRLEDGRMLHVRITARGFDRDFAMQNNLISMYTRCGSLESARRYFYS 239

Query: 372 SSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLG 431
             +K L +WN M+A Y Q    ++A+ L++ M      P+  T SS++ +CA LGA+  G
Sbjct: 240 IEKKELGAWNTMLAAYAQFDKGKDALFLYKNMLLEGFTPDRFTFSSVVDSCASLGALREG 299

Query: 432 KWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLH 491
           K++HE   S  FE ++ + TAL++MYAKCG++ +A++ FD +S+K  V+W+ MI+    H
Sbjct: 300 KFIHECSTSCGFEKDVILGTALVNMYAKCGSLADAKKSFDGISNKDVVSWSAMIAASAQH 359

Query: 492 GHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEH 551
           GH  EAL+L   M   GI  + VT  SVL+ACSH G + EG + F  +  D G +   E+
Sbjct: 360 GHAEEALELSHLMNLQGIAQNEVTASSVLHACSHGGRLYEGIDYFMGLSQDFGIERDEEN 419

Query: 552 YACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELD 611
               +D+LGRAG L++A   +  +  +        LLG C +H D    +  ++++  L+
Sbjct: 420 TVGFIDLLGRAGWLKEAEHVLHTMPFKVSFVALVTLLGGCKVHGDVRRGKAFTKRIVALE 479

Query: 612 PENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLH 671
           PEN G +VLL+N+Y+A   +   A +R+ ++K+ + +  GC+ IE     + F+ GD  +
Sbjct: 480 PENPGSYVLLNNMYAAAGRWDDVAKLRRYMRKKGVKRQTGCSSIEYRDKIYEFSVGDTSN 539

Query: 672 PQSTAIYAMLEKLNGKMR-EAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATE 730
           P++  I A LE+L  +M+ E G+  +T    HDV +++KE ++K HSEK+A+ FGLI + 
Sbjct: 540 PRNLEIRAELERLYSRMKEEEGYVPDTRDVFHDVSDDKKEELLKFHSEKMAMGFGLITSP 599

Query: 731 PGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           PG+ +RIIKNLRVC DCHT  K  SK+TGR I+VRD  RFHHF+GG+CSCGDYW
Sbjct: 600 PGSTLRIIKNLRVCSDCHTVGKLASKITGRRIIVRDGTRFHHFEGGICSCGDYW 653



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 119/465 (25%), Positives = 202/465 (43%), Gaps = 34/465 (7%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           AR +F  I + + F +++++  +  N M + ++  Y  + +   ++ D +T S VL+A +
Sbjct: 1   ARQVFDRIKQRNAFSWSILVECYVQNAMYQEALEVYKEMVREE-ISIDAYTLSSVLAACT 59

Query: 120 ACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPE-------- 171
              D   G ++   A   G+  D+ V  +L+ L+ K   ++ A  VF  M          
Sbjct: 60  KLLDVEEGRMVQRKAEELGFEKDVVVATSLIHLFAKCGCLEEAESVFRSMGAMRDIISVT 119

Query: 172 ----------------------KDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLD 209
                                 KD V WN+MI+        +D+  +F  M   G T  D
Sbjct: 120 AMIGAYCGSLKDSKSLFLTMDVKDVVSWNAMIAAYTLYGHDKDAFSLFHRMCTLGHT-PD 178

Query: 210 STSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFR 269
             + +++L A A  + L  G  +       GF     +   L+S Y++CG +E A   F 
Sbjct: 179 IYTFSSILGACASPKRLEDGRMLHVRITARGFDRDFAMQNNLISMYTRCGSLESARRYFY 238

Query: 270 DIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHL 329
            I + +L + N M++ Y    K + +L L++ +L      +  T   ++      G L  
Sbjct: 239 SIEKKELGAWNTMLAAYAQFDKGKDALFLYKNMLLEGFTPDRFTFSSVVDSCASLGALRE 298

Query: 330 TNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQ 389
              IH      G   +  + TAL  +Y++   +  A+K FD  S K + SW+AMIA   Q
Sbjct: 299 GKFIHECSTSCGFEKDVILGTALVNMYAKCGSLADAKKSFDGISNKDVVSWSAMIAASAQ 358

Query: 390 NGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLG-KWVHELVKSRNFESNIY 448
           +G  EEA+ L   M    +A N VT SS+L AC+  G +  G  +   L +    E +  
Sbjct: 359 HGHAEEALELSHLMNLQGIAQNEVTASSVLHACSHGGRLYEGIDYFMGLSQDFGIERDEE 418

Query: 449 VSTALIDMYAKCGNIVEARELFDLMSHK-SEVTWNTMISGYGLHG 492
            +   ID+  + G + EA  +   M  K S V   T++ G  +HG
Sbjct: 419 NTVGFIDLLGRAGWLKEAEHVLHTMPFKVSFVALVTLLGGCKVHG 463



 Score = 76.6 bits (187), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 65/316 (20%), Positives = 137/316 (43%), Gaps = 5/316 (1%)

Query: 29  HAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNEMP 88
           H +I   GF  D +    L    +   +   AR  F+SI K +L  +N ++  ++  +  
Sbjct: 202 HVRITARGFDRDFAMQNNLISMYTRCGSLESARRYFYSIEKKELGAWNTMLAAYAQFDKG 261

Query: 89  KSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAA 148
           K ++  Y ++      TPD FT+S V+ + ++      G  +H  +   G+  D+ +G A
Sbjct: 262 KDALFLYKNMLLE-GFTPDRFTFSSVVDSCASLGALREGKFIHECSTSCGFEKDVILGTA 320

Query: 149 LVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWL 208
           LV++Y K   +  A+K FD +  KD V W++MI+   ++   ++++ +   ++   G   
Sbjct: 321 LVNMYAKCGSLADAKKSFDGISNKDVVSWSAMIAASAQHGHAEEALEL-SHLMNLQGIAQ 379

Query: 209 DSTSVAAVLPAVAEVQELRLGME-IQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELL 267
           +  + ++VL A +    L  G++    L    G         G +    + G ++ AE +
Sbjct: 380 NEVTASSVLHACSHGGRLYEGIDYFMGLSQDFGIERDEENTVGFIDLLGRAGWLKEAEHV 439

Query: 268 FRDI-VRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGH 326
              +  +   ++   ++ G   +G      + F + + + E  N  + V L  ++   G 
Sbjct: 440 LHTMPFKVSFVALVTLLGGCKVHGDVRRG-KAFTKRIVALEPENPGSYVLLNNMYAAAGR 498

Query: 327 LHLTNCIHSFCLKSGI 342
                 +  +  K G+
Sbjct: 499 WDDVAKLRRYMRKKGV 514


>gi|356545004|ref|XP_003540936.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59200, chloroplastic-like [Glycine max]
          Length = 629

 Score =  428 bits (1100), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 229/584 (39%), Positives = 329/584 (56%), Gaps = 31/584 (5%)

Query: 232 IQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGK 291
           I C  +K       +V   L+  Y K   ++ A  LFR    P++    ++I G+   G 
Sbjct: 46  IHCHAIKTRTSQDPFVAFELLRVYCKVNYIDHAIKLFRCTQNPNVYLYTSLIDGFVSFGS 105

Query: 292 TESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTA 351
              ++ LF Q++      ++  +  ++        L     +H   LKSG+  + S+   
Sbjct: 106 YTDAINLFCQMVRKHVLADNYAVTAMLKACVLQRALGSGKEVHGLVLKSGLGLDRSIALK 165

Query: 352 LSTVYSRLNEMEAARKLFDESSEKSLAS-------------------------------W 380
           L  +Y +   +E ARK+FD   E+ + +                               W
Sbjct: 166 LVELYGKCGVLEDARKMFDGMPERDVVACTVMIGSCFDCGMVEEAIEVFNEMGTRDTVCW 225

Query: 381 NAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKS 440
             +I G  +NG     + +F+EMQ   V PN VT   +LSACAQLGA+ LG+W+H  ++ 
Sbjct: 226 TMVIDGLVRNGEFNRGLEVFREMQVKGVEPNEVTFVCVLSACAQLGALELGRWIHAYMRK 285

Query: 441 RNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQL 500
              E N +V+ ALI+MY++CG+I EA+ LFD +  K   T+N+MI G  LHG  +EA++L
Sbjct: 286 CGVEVNRFVAGALINMYSRCGDIDEAQALFDGVRVKDVSTYNSMIGGLALHGKSIEAVEL 345

Query: 501 FSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILG 560
           FSEML   +RP+G+TF+ VL ACSH GLV  G EIF+SM   HG +P  EHY CMVDILG
Sbjct: 346 FSEMLKERVRPNGITFVGVLNACSHGGLVDLGGEIFESMEMIHGIEPEVEHYGCMVDILG 405

Query: 561 RAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVL 620
           R G+LE+A +FI  + VE    +  +LL AC IHK+  +    ++ L E    + G  ++
Sbjct: 406 RVGRLEEAFDFIGRMGVEADDKMLCSLLSACKIHKNIGMGEKVAKLLSEHYRIDSGSFIM 465

Query: 621 LSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAM 680
           LSN Y++   +  AA VR+ ++K  + K PGC+ IEV    H F SGD  HP+   IY  
Sbjct: 466 LSNFYASLGRWSYAAEVREKMEKGGIIKEPGCSSIEVNNAIHEFFSGDLRHPERKRIYKK 525

Query: 681 LEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKN 740
           LE+LN   +  G+   T  ALHD+++E+KEL + VHSE+LAI +GL++TE  T +R+ KN
Sbjct: 526 LEELNYLTKFEGYLPATEVALHDIDDEQKELALAVHSERLAICYGLVSTEAYTTLRVGKN 585

Query: 741 LRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           LR+C DCH   K I+K+T R IVVRD NRFHHF+ G CSC DYW
Sbjct: 586 LRICDDCHAMIKLIAKITRRKIVVRDRNRFHHFENGECSCKDYW 629



 Score =  119 bits (297), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 121/498 (24%), Positives = 200/498 (40%), Gaps = 68/498 (13%)

Query: 9   RNLFLSLL-KGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSI 67
           R + +SLL K  K    +   H   I      D     +L           +A  LF   
Sbjct: 26  RRVIISLLHKNRKNPKHVQSIHCHAIKTRTSQDPFVAFELLRVYCKVNYIDHAIKLFRCT 85

Query: 68  PKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIG 127
             P+++L+  +I GF +      +I  +  + +   L  DN+  + +L A         G
Sbjct: 86  QNPNVYLYTSLIDGFVSFGSYTDAINLFCQMVRKHVLA-DNYAVTAMLKACVLQRALGSG 144

Query: 128 VLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKD-------------- 173
             +HG  + SG G D  +   LV+LY K   ++ ARK+FD MPE+D              
Sbjct: 145 KEVHGLVLKSGLGLDRSIALKLVELYGKCGVLEDARKMFDGMPERDVVACTVMIGSCFDC 204

Query: 174 -----------------TVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAV 216
                            TV W  +I GL++N  F   + VF +M +  G   +  +   V
Sbjct: 205 GMVEEAIEVFNEMGTRDTVCWTMVIDGLVRNGEFNRGLEVFREM-QVKGVEPNEVTFVCV 263

Query: 217 LPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDL 276
           L A A++  L LG  I     K G   + +V   L++ YS+CG+++ A+ LF  +   D+
Sbjct: 264 LSACAQLGALELGRWIHAYMRKCGVEVNRFVAGALINMYSRCGDIDEAQALFDGVRVKDV 323

Query: 277 ISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSF 336
            + N+MI G   +GK+  ++ LF ++L    R N  T VG+           L  C H  
Sbjct: 324 STYNSMIGGLALHGKSIEAVELFSEMLKERVRPNGITFVGV-----------LNACSHGG 372

Query: 337 CLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEA 396
            +  G      +  ++  ++    E+E                +  M+    + G  EEA
Sbjct: 373 LVDLG----GEIFESMEMIHGIEPEVE---------------HYGCMVDILGRVGRLEEA 413

Query: 397 ISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDM 456
                 M    V  +   + S+LSAC     I +G+ V +L+ S ++  +      L + 
Sbjct: 414 FDFIGRM---GVEADDKMLCSLLSACKIHKNIGMGEKVAKLL-SEHYRIDSGSFIMLSNF 469

Query: 457 YAKCGNIVEARELFDLMS 474
           YA  G    A E+ + M 
Sbjct: 470 YASLGRWSYAAEVREKME 487


>gi|356526928|ref|XP_003532067.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49710-like [Glycine max]
          Length = 722

 Score =  428 bits (1100), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 240/652 (36%), Positives = 378/652 (57%), Gaps = 12/652 (1%)

Query: 142 DLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMV 201
           ++F    L++ Y K S +  AR+VFD++P+ D V +N++I+          ++ +F + V
Sbjct: 74  NVFSYNTLINAYAKHSLIHIARRVFDEIPQPDIVSYNTLIAAYADRGECGPTLRLFEE-V 132

Query: 202 RNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEV 261
           R     LD  +++ V+ A  +  ++ L  ++ C  +  G   +  V   +++ YS+ G +
Sbjct: 133 RELRLGLDGFTLSGVITACGD--DVGLVRQLHCFVVVCGHDCYASVNNAVLACYSRKGFL 190

Query: 262 ERAELLFRDIVR---PDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLI 318
             A  +FR++      D +S NAMI     + +   ++ LFR+++    +V+  T+  ++
Sbjct: 191 SEARRVFREMGEGGGRDEVSWNAMIVACGQHREGMEAVGLFREMVRRGLKVDMFTMASVL 250

Query: 319 PVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRL-NEMEAARKLFDESSEKSL 377
             F     L      H   +KSG   NS V + L  +YS+    M   RK+F+E +   L
Sbjct: 251 TAFTCVKDLVGGRQFHGMMIKSGFHGNSHVGSGLIDLYSKCAGSMVECRKVFEEITAPDL 310

Query: 378 ASWNAMIAGYT-QNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHE 436
             WN MI+G++    L+E+ +  F+EMQ +   P+  +   + SAC+ L + SLGK VH 
Sbjct: 311 VLWNTMISGFSLYEDLSEDGLWCFREMQRNGFRPDDCSFVCVTSACSNLSSPSLGKQVHA 370

Query: 437 L-VKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGL 495
           L +KS    + + V+ AL+ MY+KCGN+ +AR +FD M   + V+ N+MI+GY  HG  +
Sbjct: 371 LAIKSDVPYNRVSVNNALVAMYSKCGNVHDARRVFDTMPEHNTVSLNSMIAGYAQHGVEV 430

Query: 496 EALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACM 555
           E+L+LF  ML   I P+ +TF++VL AC H G V EG + F  M      +P AEHY+CM
Sbjct: 431 ESLRLFELMLEKDIAPNSITFIAVLSACVHTGKVEEGQKYFNMMKERFCIEPEAEHYSCM 490

Query: 556 VDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENV 615
           +D+LGRAG+L++A   I+ +   PG   W  LLGAC  H +  LA  A+ +   L+P N 
Sbjct: 491 IDLLGRAGKLKEAERIIETMPFNPGSIEWATLLGACRKHGNVELAVKAANEFLRLEPYNA 550

Query: 616 GYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQST 675
             +V+LSN+Y++   + +AATV++++++R + K PGC+ IE+    HVF + D  HP   
Sbjct: 551 APYVMLSNMYASAARWEEAATVKRLMRERGVKKKPGCSWIEIDKKVHVFVAEDTSHPMIK 610

Query: 676 AIYAMLEKLNGKMREAGFQTETVTAL---HDVEEEEKELMMKVHSEKLAIAFGLIATEPG 732
            I+  + K+  KM++AG+  +   AL    +VE +E+E  +  HSEKLA+AFGLI+TE G
Sbjct: 611 EIHVYMGKMLKKMKQAGYVPDIRWALVKDEEVEPDERERRLLYHSEKLAVAFGLISTEEG 670

Query: 733 TEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
             I ++KNLR+C DCH A K IS +TGR I VRD +RFH FK G CSC DYW
Sbjct: 671 VPILVVKNLRICGDCHNAVKLISALTGREITVRDTHRFHCFKEGHCSCRDYW 722



 Score =  195 bits (496), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 138/474 (29%), Positives = 240/474 (50%), Gaps = 17/474 (3%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           AR +F  IP+PD+  +N +I  +++      ++  +  +R+   L  D FT S V++A  
Sbjct: 94  ARRVFDEIPQPDIVSYNTLIAAYADRGECGPTLRLFEEVRE-LRLGLDGFTLSGVITA-- 150

Query: 120 ACCDRSIGVLLHGHAIVSGYGSDLF--VGAALVDLYFKFSWVKSARKVFDKMPE---KDT 174
             C   +G++   H  V   G D +  V  A++  Y +  ++  AR+VF +M E   +D 
Sbjct: 151 --CGDDVGLVRQLHCFVVVCGHDCYASVNNAVLACYSRKGFLSEARRVFREMGEGGGRDE 208

Query: 175 VLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQC 234
           V WN+MI    ++    +++ +F +MVR  G  +D  ++A+VL A   V++L  G +   
Sbjct: 209 VSWNAMIVACGQHREGMEAVGLFREMVRR-GLKVDMFTMASVLTAFTCVKDLVGGRQFHG 267

Query: 235 LGLKLGFHDHVYVLTGLVSFYSKC-GEVERAELLFRDIVRPDLISCNAMISGYTC-NGKT 292
           + +K GFH + +V +GL+  YSKC G +     +F +I  PDL+  N MISG++     +
Sbjct: 268 MMIKSGFHGNSHVGSGLIDLYSKCAGSMVECRKVFEEITAPDLVLWNTMISGFSLYEDLS 327

Query: 293 ESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNS-SVLTA 351
           E  L  FR++  +  R +  + V +           L   +H+  +KS +  N  SV  A
Sbjct: 328 EDGLWCFREMQRNGFRPDDCSFVCVTSACSNLSSPSLGKQVHALAIKSDVPYNRVSVNNA 387

Query: 352 LSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPN 411
           L  +YS+   +  AR++FD   E +  S N+MIAGY Q+G+  E++ LF+ M    +APN
Sbjct: 388 LVAMYSKCGNVHDARRVFDTMPEHNTVSLNSMIAGYAQHGVEVESLRLFELMLEKDIAPN 447

Query: 412 PVTVSSILSACAQLGAISLGKWVHELVKSR-NFESNIYVSTALIDMYAKCGNIVEARELF 470
            +T  ++LSAC   G +  G+    ++K R   E      + +ID+  + G + EA  + 
Sbjct: 448 SITFIAVLSACVHTGKVEEGQKYFNMMKERFCIEPEAEHYSCMIDLLGRAGKLKEAERII 507

Query: 471 DLMS-HKSEVTWNTMISGYGLHGHGLEALQLFSEMLH-SGIRPSGVTFLSVLYA 522
           + M  +   + W T++     HG+   A++  +E L       +    LS +YA
Sbjct: 508 ETMPFNPGSIEWATLLGACRKHGNVELAVKAANEFLRLEPYNAAPYVMLSNMYA 561



 Score =  139 bits (349), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 90/289 (31%), Positives = 153/289 (52%), Gaps = 7/289 (2%)

Query: 242 HDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQ 301
           + +V+    L++ Y+K   +  A  +F +I +PD++S N +I+ Y   G+   +LRLF +
Sbjct: 72  YPNVFSYNTLINAYAKHSLIHIARRVFDEIPQPDIVSYNTLIAAYADRGECGPTLRLFEE 131

Query: 302 LLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNE 361
           +      ++  T+ G+I        + L   +H F +  G    +SV  A+   YSR   
Sbjct: 132 VRELRLGLDGFTLSGVITAC--GDDVGLVRQLHCFVVVCGHDCYASVNNAVLACYSRKGF 189

Query: 362 MEAARKLFDESSE---KSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSI 418
           +  AR++F E  E   +   SWNAMI    Q+    EA+ LF+EM    +  +  T++S+
Sbjct: 190 LSEARRVFREMGEGGGRDEVSWNAMIVACGQHREGMEAVGLFREMVRRGLKVDMFTMASV 249

Query: 419 LSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKC-GNIVEARELFDLMSHKS 477
           L+A   +  +  G+  H ++    F  N +V + LID+Y+KC G++VE R++F+ ++   
Sbjct: 250 LTAFTCVKDLVGGRQFHGMMIKSGFHGNSHVGSGLIDLYSKCAGSMVECRKVFEEITAPD 309

Query: 478 EVTWNTMISGYGLHGH-GLEALQLFSEMLHSGIRPSGVTFLSVLYACSH 525
            V WNTMISG+ L+     + L  F EM  +G RP   +F+ V  ACS+
Sbjct: 310 LVLWNTMISGFSLYEDLSEDGLWCFREMQRNGFRPDDCSFVCVTSACSN 358



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 108/383 (28%), Positives = 172/383 (44%), Gaps = 50/383 (13%)

Query: 103 ALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSW-VKS 161
            L  D FT + VL+A +   D   G   HG  I SG+  +  VG+ L+DLY K +  +  
Sbjct: 238 GLKVDMFTMASVLTAFTCVKDLVGGRQFHGMMIKSGFHGNSHVGSGLIDLYSKCAGSMVE 297

Query: 162 ARKVFDKMPEKDTVLWNSMISGL-MKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAV 220
            RKVF+++   D VLWN+MISG  +     +D +W F +M RNG    D  S   V  A 
Sbjct: 298 CRKVFEEITAPDLVLWNTMISGFSLYEDLSEDGLWCFREMQRNGFR-PDDCSFVCVTSAC 356

Query: 221 AEVQELRLGMEIQCLGLKLGF-HDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISC 279
           + +    LG ++  L +K    ++ V V   LV+ YSKCG V  A  +F  +   + +S 
Sbjct: 357 SNLSSPSLGKQVHALAIKSDVPYNRVSVNNALVAMYSKCGNVHDARRVFDTMPEHNTVSL 416

Query: 280 NAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLK 339
           N+MI+GY  +G    SLRLF  +L      NS T + +           L+ C+H+    
Sbjct: 417 NSMIAGYAQHGVEVESLRLFELMLEKDIAPNSITFIAV-----------LSACVHT---- 461

Query: 340 SGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEK-----SLASWNAMIAGYTQNGLTE 394
                                ++E  +K F+   E+         ++ MI    + G  +
Sbjct: 462 --------------------GKVEEGQKYFNMMKERFCIEPEAEHYSCMIDLLGRAGKLK 501

Query: 395 EAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLG-KWVHELVKSRNFESNIYVSTAL 453
           EA  + + M  +   P  +  +++L AC + G + L  K  +E ++   + +  YV   L
Sbjct: 502 EAERIIETMPFN---PGSIEWATLLGACRKHGNVELAVKAANEFLRLEPYNAAPYV--ML 556

Query: 454 IDMYAKCGNIVEARELFDLMSHK 476
            +MYA      EA  +  LM  +
Sbjct: 557 SNMYASAARWEEAATVKRLMRER 579



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 63/212 (29%), Positives = 103/212 (48%), Gaps = 13/212 (6%)

Query: 27  QTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYA-----RALFFSIPKPDLFLFNVIIRG 81
           Q H  +I  GF  +    + +   L D  + C       R +F  I  PDL L+N +I G
Sbjct: 264 QFHGMMIKSGFHGN----SHVGSGLIDLYSKCAGSMVECRKVFEEITAPDLVLWNTMISG 319

Query: 82  FS-NNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYG 140
           FS   ++ +  +  +  +++N    PD+ ++  V SA S     S+G  +H  AI S   
Sbjct: 320 FSLYEDLSEDGLWCFREMQRN-GFRPDDCSFVCVTSACSNLSSPSLGKQVHALAIKSDVP 378

Query: 141 SD-LFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGD 199
            + + V  ALV +Y K   V  AR+VFD MPE +TV  NSMI+G  ++    +S+ +F +
Sbjct: 379 YNRVSVNNALVAMYSKCGNVHDARRVFDTMPEHNTVSLNSMIAGYAQHGVEVESLRLF-E 437

Query: 200 MVRNGGTWLDSTSVAAVLPAVAEVQELRLGME 231
           ++       +S +  AVL A     ++  G +
Sbjct: 438 LMLEKDIAPNSITFIAVLSACVHTGKVEEGQK 469



 Score = 45.8 bits (107), Expect = 0.093,   Method: Compositional matrix adjust.
 Identities = 49/217 (22%), Positives = 80/217 (36%), Gaps = 38/217 (17%)

Query: 414 TVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVE-------- 465
           T  ++L AC     +  GK +H L        + Y+S     +Y+KCG++          
Sbjct: 11  TFRNLLKACIAQRDLITGKILHALYFKSLIPPSTYLSNHFTLLYSKCGSLHNAQTSFHLT 70

Query: 466 -----------------------ARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFS 502
                                  AR +FD +     V++NT+I+ Y   G     L+LF 
Sbjct: 71  QYPNVFSYNTLINAYAKHSLIHIARRVFDEIPQPDIVSYNTLIAAYADRGECGPTLRLFE 130

Query: 503 EMLHSGIRPSGVTFLSVLYAC-SHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGR 561
           E+    +   G T   V+ AC    GLVR+        +   G    A     ++    R
Sbjct: 131 EVRELRLGLDGFTLSGVITACGDDVGLVRQ----LHCFVVVCGHDCYASVNNAVLACYSR 186

Query: 562 AGQLEKALEFIKGLAVEPG--PAVWGALLGACMIHKD 596
            G L +A    + +    G     W A++ AC  H++
Sbjct: 187 KGFLSEARRVFREMGEGGGRDEVSWNAMIVACGQHRE 223


>gi|356519952|ref|XP_003528632.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Glycine max]
          Length = 693

 Score =  428 bits (1100), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 236/644 (36%), Positives = 355/644 (55%), Gaps = 39/644 (6%)

Query: 142 DLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMV 201
           D++    L+  Y K   V++   VFD+MP +D+V +N++I+    N     ++ V   M 
Sbjct: 88  DVYSWNTLLSAYAKMGMVENLHVVFDQMPYRDSVSYNTLIACFASNGHSGKALKVLVRMQ 147

Query: 202 RNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEV 261
            +G      + V A L A +++ +LR G +I    +     ++ +V   +   Y+KCG++
Sbjct: 148 EDGFQPTQYSHVNA-LQACSQLLDLRHGKQIHGRIVVADLGENTFVRNAMTDMYAKCGDI 206

Query: 262 ERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVF 321
           ++A LLF  ++  +++S N MISGY   G     + LF ++  S                
Sbjct: 207 DKARLLFDGMIDKNVVSWNLMISGYVKMGNPNECIHLFNEMQLSG--------------- 251

Query: 322 YPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWN 381
                           LK  +V+ S+VL A    Y R   ++ AR LF +  +K    W 
Sbjct: 252 ----------------LKPDLVTVSNVLNA----YFRCGRVDDARNLFIKLPKKDEICWT 291

Query: 382 AMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSR 441
            MI GY QNG  E+A  LF +M    V P+  T+SS++S+CA+L ++  G+ VH  V   
Sbjct: 292 TMIVGYAQNGREEDAWMLFGDMLRRNVKPDSYTISSMVSSCAKLASLYHGQVVHGKVVVM 351

Query: 442 NFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLF 501
             ++++ VS+AL+DMY KCG  ++AR +F+ M  ++ +TWN MI GY  +G  LEAL L+
Sbjct: 352 GIDNSMLVSSALVDMYCKCGVTLDARVIFETMPIRNVITWNAMILGYAQNGQVLEALTLY 411

Query: 502 SEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGR 561
             M     +P  +TF+ VL AC +A +V+EG + F S I +HG  P  +HYACM+ +LGR
Sbjct: 412 ERMQQENFKPDNITFVGVLSACINADMVKEGQKYFDS-ISEHGIAPTLDHYACMITLLGR 470

Query: 562 AGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLL 621
           +G ++KA++ I+G+  EP   +W  LL  C    D   A +A+  LFELDP N G +++L
Sbjct: 471 SGSVDKAVDLIQGMPHEPNYRIWSTLLSVCA-KGDLKNAELAASHLFELDPRNAGPYIML 529

Query: 622 SNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAML 681
           SN+Y+A   +   A VR ++K++   K    + +EVG   H F S D  HP+   IY  L
Sbjct: 530 SNLYAACGRWKDVAVVRSLMKEKNAKKFAAYSWVEVGNKVHRFVSEDHYHPEVGKIYGEL 589

Query: 682 EKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGT-EIRIIKN 740
            +L   +++ G+  +T   LH+V EEEK   +  HSEKLA+AF LI    G   IRIIKN
Sbjct: 590 NRLISILQQIGYNPDTNIVLHNVGEEEKFRSISYHSEKLALAFALIRKPNGVAPIRIIKN 649

Query: 741 LRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           +RVC DCH   KF S    R I++RD+NRFHHF GG CSC D W
Sbjct: 650 IRVCDDCHVFMKFASITISRPIIMRDSNRFHHFFGGKCSCNDNW 693



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 110/425 (25%), Positives = 190/425 (44%), Gaps = 38/425 (8%)

Query: 63  LFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACC 122
           +F  +P  D   +N +I  F++N     ++     ++++    P  +++   L A S   
Sbjct: 111 VFDQMPYRDSVSYNTLIACFASNGHSGKALKVLVRMQED-GFQPTQYSHVNALQACSQLL 169

Query: 123 DRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMIS 182
           D   G  +HG  +V+  G + FV  A+ D+Y K   +  AR +FD M +K+ V WN MIS
Sbjct: 170 DLRHGKQIHGRIVVADLGENTFVRNAMTDMYAKCGDIDKARLLFDGMIDKNVVSWNLMIS 229

Query: 183 GLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFH 242
           G +K     + I +F +M +  G   D  +V+ VL A                       
Sbjct: 230 GYVKMGNPNECIHLFNEM-QLSGLKPDLVTVSNVLNA----------------------- 265

Query: 243 DHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQL 302
                       Y +CG V+ A  LF  + + D I    MI GY  NG+ E +  LF  +
Sbjct: 266 ------------YFRCGRVDDARNLFIKLPKKDEICWTTMIVGYAQNGREEDAWMLFGDM 313

Query: 303 LASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEM 362
           L    + +S TI  ++        L+    +H   +  GI ++  V +AL  +Y +    
Sbjct: 314 LRRNVKPDSYTISSMVSSCAKLASLYHGQVVHGKVVVMGIDNSMLVSSALVDMYCKCGVT 373

Query: 363 EAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSAC 422
             AR +F+    +++ +WNAMI GY QNG   EA++L++ MQ     P+ +T   +LSAC
Sbjct: 374 LDARVIFETMPIRNVITWNAMILGYAQNGQVLEALTLYERMQQENFKPDNITFVGVLSAC 433

Query: 423 AQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEV-TW 481
                +  G+   + +        +     +I +  + G++ +A +L   M H+     W
Sbjct: 434 INADMVKEGQKYFDSISEHGIAPTLDHYACMITLLGRSGSVDKAVDLIQGMPHEPNYRIW 493

Query: 482 NTMIS 486
           +T++S
Sbjct: 494 STLLS 498



 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 60/242 (24%), Positives = 109/242 (45%), Gaps = 27/242 (11%)

Query: 4   KTPQSRNLFLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARAL 63
           K   S NL +S        ++      ++ + G + DL TV+ + +          AR L
Sbjct: 219 KNVVSWNLMISGYVKMGNPNECIHLFNEMQLSGLKPDLVTVSNVLNAYFRCGRVDDARNL 278

Query: 64  FFSIPKPDLFLFNVIIRGFSNNEMPKSS-ICFYTHLRKNTALTPDNFTYSFVLSAASACC 122
           F  +PK D   +  +I G++ N   + + + F   LR+N  + PD++T S ++S+ +   
Sbjct: 279 FIKLPKKDEICWTTMIVGYAQNGREEDAWMLFGDMLRRN--VKPDSYTISSMVSSCAKLA 336

Query: 123 DRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMIS 182
               G ++HG  +V G  + + V +ALVD+Y K      AR +F+ MP ++ + WN+MI 
Sbjct: 337 SLYHGQVVHGKVVVMGIDNSMLVSSALVDMYCKCGVTLDARVIFETMPIRNVITWNAMIL 396

Query: 183 GLMKNCCFQDSIWVF------------------------GDMVRNGGTWLDSTSVAAVLP 218
           G  +N    +++ ++                         DMV+ G  + DS S   + P
Sbjct: 397 GYAQNGQVLEALTLYERMQQENFKPDNITFVGVLSACINADMVKEGQKYFDSISEHGIAP 456

Query: 219 AV 220
            +
Sbjct: 457 TL 458


>gi|297609253|ref|NP_001062888.2| Os09g0327200 [Oryza sativa Japonica Group]
 gi|255678787|dbj|BAF24802.2| Os09g0327200 [Oryza sativa Japonica Group]
          Length = 739

 Score =  427 bits (1099), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 257/729 (35%), Positives = 392/729 (53%), Gaps = 38/729 (5%)

Query: 39  NDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFS-NNEMPKSSICFYTH 97
           N   T    A R++D      A  LF ++P+     +N ++ G+S N  +P ++  F   
Sbjct: 42  NKAITAHMRAGRVAD------AERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFRAI 95

Query: 98  LRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFS 157
            R      PDN++Y+ +L A +     +    L     V     D      ++  +    
Sbjct: 96  PR------PDNYSYNTLLHALAVSSSLADARGLFDEMPVR----DSVTYNVMISSHANHG 145

Query: 158 WVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVL 217
            V  AR  FD  PEKD V WN M++  ++N   +++  +F     N  T  D  S  A++
Sbjct: 146 LVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLF-----NSRTEWDVISWNALM 200

Query: 218 PAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLI 277
               +  ++    E + L  ++   D V     +VS Y++ G++  A  LF      D+ 
Sbjct: 201 SGYVQWGKMS---EARELFDRMPGRD-VVSWNIMVSGYARRGDMVEARRLFDAAPVRDVF 256

Query: 278 SCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFC 337
           +  A++SGY  NG  E + R+F    A  ER N+ +   ++  +     +     + +  
Sbjct: 257 TWTAVVSGYAQNGMLEEARRVFD---AMPER-NAVSWNAMVAAYIQRRMMDEAKELFNMM 312

Query: 338 LKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAI 397
               + S +++LT     Y++   +E A+ +FD   +K   SW AM+A Y+Q G +EE +
Sbjct: 313 PCRNVASWNTMLTG----YAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETL 368

Query: 398 SLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMY 457
            LF EM       N    + +LS CA + A+  G  +H  +    +    +V  AL+ MY
Sbjct: 369 QLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMY 428

Query: 458 AKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFL 517
            KCGN+ +AR  F+ M  +  V+WNTMI+GY  HG G EAL++F  M  +  +P  +T +
Sbjct: 429 FKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLV 488

Query: 518 SVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAV 577
            VL ACSH+GLV +G   F SM HD G     EHY CM+D+LGRAG+L +A + +K +  
Sbjct: 489 GVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPF 548

Query: 578 EPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATV 637
           EP   +WGALLGA  IH++  L R A+EK+FEL+PEN G +VLLSNIY++   +  A  +
Sbjct: 549 EPDSTMWGALLGASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYASSGKWRDARKM 608

Query: 638 RQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTET 697
           R ++++R + K PG + IEV    H F++GD +HP+   IYA LE L+ +M++AG+ + T
Sbjct: 609 RVMMEERGVKKVPGFSWIEVQNKVHTFSAGDCVHPEKEKIYAFLEDLDMRMKKAGYVSAT 668

Query: 698 VTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATK----F 753
              LHDVEEEEKE M+K HSEKLA+A+G++   PG  IR+IKNLRVC DCH A K     
Sbjct: 669 DMVLHDVEEEEKEHMLKYHSEKLAVAYGILNIPPGRPIRVIKNLRVCGDCHNAFKAWIEL 728

Query: 754 ISKVTGRVI 762
           + KV+GR  
Sbjct: 729 MLKVSGRTF 737



 Score = 45.1 bits (105), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 30/124 (24%), Positives = 54/124 (43%), Gaps = 18/124 (14%)

Query: 443 FESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFS 502
            E  +  S   I  + + G + +A  LF  M  +S  T+N M++GY  +G     L L +
Sbjct: 34  LEPEVIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGR----LPLAA 89

Query: 503 EMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSM-IHD-------------HGFKPL 548
            +  +  RP   ++ ++L+A + +  + +   +F  M + D             HG   L
Sbjct: 90  SLFRAIPRPDNYSYNTLLHALAVSSSLADARGLFDEMPVRDSVTYNVMISSHANHGLVSL 149

Query: 549 AEHY 552
           A HY
Sbjct: 150 ARHY 153


>gi|224137958|ref|XP_002322694.1| predicted protein [Populus trichocarpa]
 gi|222867324|gb|EEF04455.1| predicted protein [Populus trichocarpa]
          Length = 586

 Score =  427 bits (1098), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 218/561 (38%), Positives = 339/561 (60%), Gaps = 2/561 (0%)

Query: 226 LRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISG 285
           +R G  +    +K  +   VY+ T L+  Y+KC  +  A  +F ++   +++S  AMISG
Sbjct: 26  VREGQRVHAHMIKTCYLPPVYLSTRLIILYTKCECLGCARHVFDEMRERNVVSWTAMISG 85

Query: 286 YTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSN 345
           Y+  G    +L LF Q+L S    N  T   ++     F    L   IHS   K    ++
Sbjct: 86  YSQRGFASEALHLFVQMLRSDTEPNEFTFATVLSSCTGFSGFELGRQIHSHIFKRNYENH 145

Query: 346 SSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQA 405
             V ++L  +Y++   +  AR +F+   E+ + S  A+I+GY Q GL EEA+ LF  +Q 
Sbjct: 146 IFVGSSLLDMYAKAGRIHEARGVFECLPERDVVSCTAIISGYAQLGLDEEALELFCRLQR 205

Query: 406 SKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVE 465
             ++ N VT +S+L+A + L A+  GK VH  V        + +  +LIDMY+KCGN+  
Sbjct: 206 EGMSSNYVTYASLLTALSGLAALDHGKQVHSHVLRCELPFYVVLQNSLIDMYSKCGNLNY 265

Query: 466 ARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSG-IRPSGVTFLSVLYACS 524
           AR++F+ M  ++ ++WN M+ GY  HG G+E ++LF  M     ++P  VTFL+VL  CS
Sbjct: 266 ARKIFNNMPVRTVISWNAMLVGYSKHGKGIEVVKLFKLMREENKVKPDSVTFLAVLSGCS 325

Query: 525 HAGLVREGDEIFQSMIHD-HGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAV 583
           H GL  +G E+F  M++     +   EHY C++D+LGRAG++E+A E IK +  EP  A+
Sbjct: 326 HGGLEDKGLEMFDEMMNGGDEIEAGIEHYGCVIDLLGRAGRVEEAFELIKKMPFEPTAAI 385

Query: 584 WGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKK 643
           WG+LLGAC +H +TN+      +L E++PEN G +V+LSN+Y++   +     VR+++ +
Sbjct: 386 WGSLLGACRVHSNTNIGEFVGCRLLEIEPENAGNYVILSNLYASAGRWEDVRNVRELMME 445

Query: 644 RKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHD 703
           + + K PG + IE+  T H F + D+ HP+   ++  + +L  K +E+G+  +    L+D
Sbjct: 446 KAVIKEPGRSWIELDQTIHTFYASDRSHPRREEVFLKVRELLVKFKESGYVPDQSCVLYD 505

Query: 704 VEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIV 763
           V+EE+KE ++  HSEKLA+AFGLI+T  G  +R+IKNLR+C+DCH   KF+SKV GR + 
Sbjct: 506 VDEEQKEKILLGHSEKLALAFGLISTSEGVPLRVIKNLRICVDCHNFAKFVSKVYGRQVS 565

Query: 764 VRDANRFHHFKGGVCSCGDYW 784
           +RD NRFHH  GG+CSCGDYW
Sbjct: 566 IRDKNRFHHVAGGICSCGDYW 586



 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 104/369 (28%), Positives = 182/369 (49%), Gaps = 5/369 (1%)

Query: 127 GVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMK 186
           G  +H H I + Y   +++   L+ LY K   +  AR VFD+M E++ V W +MISG  +
Sbjct: 29  GQRVHAHMIKTCYLPPVYLSTRLIILYTKCECLGCARHVFDEMRERNVVSWTAMISGYSQ 88

Query: 187 NCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVY 246
                +++ +F  M+R+  T  +  + A VL +        LG +I     K  + +H++
Sbjct: 89  RGFASEALHLFVQMLRSD-TEPNEFTFATVLSSCTGFSGFELGRQIHSHIFKRNYENHIF 147

Query: 247 VLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASA 306
           V + L+  Y+K G +  A  +F  +   D++SC A+ISGY   G  E +L LF +L    
Sbjct: 148 VGSSLLDMYAKAGRIHEARGVFECLPERDVVSCTAIISGYAQLGLDEEALELFCRLQREG 207

Query: 307 ERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAAR 366
              N  T   L+        L     +HS  L+  +     +  +L  +YS+   +  AR
Sbjct: 208 MSSNYVTYASLLTALSGLAALDHGKQVHSHVLRCELPFYVVLQNSLIDMYSKCGNLNYAR 267

Query: 367 KLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEM-QASKVAPNPVTVSSILSACAQL 425
           K+F+    +++ SWNAM+ GY+++G   E + LF+ M + +KV P+ VT  ++LS C+  
Sbjct: 268 KIFNNMPVRTVISWNAMLVGYSKHGKGIEVVKLFKLMREENKVKPDSVTFLAVLSGCSHG 327

Query: 426 GAISLG-KWVHELVKSRN-FESNIYVSTALIDMYAKCGNIVEARELFDLMSHK-SEVTWN 482
           G    G +   E++   +  E+ I     +ID+  + G + EA EL   M  + +   W 
Sbjct: 328 GLEDKGLEMFDEMMNGGDEIEAGIEHYGCVIDLLGRAGRVEEAFELIKKMPFEPTAAIWG 387

Query: 483 TMISGYGLH 491
           +++    +H
Sbjct: 388 SLLGACRVH 396



 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 112/483 (23%), Positives = 219/483 (45%), Gaps = 42/483 (8%)

Query: 1   MSMKTPQSR----NLFLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKA 56
           M+++ P+ +    N+ L+     +   +  + HA +I   +   +   T+L    +  + 
Sbjct: 1   MAIQGPEIKFDGYNMLLNECVNKRAVREGQRVHAHMIKTCYLPPVYLSTRLIILYTKCEC 60

Query: 57  TCYARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSI-CFYTHLRKNTALTPDNFTYSFVL 115
              AR +F  + + ++  +  +I G+S       ++  F   LR +T   P+ FT++ VL
Sbjct: 61  LGCARHVFDEMRERNVVSWTAMISGYSQRGFASEALHLFVQMLRSDT--EPNEFTFATVL 118

Query: 116 SAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTV 175
           S+ +      +G  +H H     Y + +FVG++L+D+Y K   +  AR VF+ +PE+D V
Sbjct: 119 SSCTGFSGFELGRQIHSHIFKRNYENHIFVGSSLLDMYAKAGRIHEARGVFECLPERDVV 178

Query: 176 LWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCL 235
              ++ISG  +    ++++ +F  + R G +  +  + A++L A++ +  L  G ++   
Sbjct: 179 SCTAIISGYAQLGLDEEALELFCRLQREGMS-SNYVTYASLLTALSGLAALDHGKQVHSH 237

Query: 236 GLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESS 295
            L+     +V +   L+  YSKCG +  A  +F ++    +IS NAM+ GY+ +GK    
Sbjct: 238 VLRCELPFYVVLQNSLIDMYSKCGNLNYARKIFNNMPVRTVISWNAMLVGYSKHGKGIEV 297

Query: 296 LRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTV 355
           ++LF+ L+    +V   ++  L           L+ C H      G       L     +
Sbjct: 298 VKLFK-LMREENKVKPDSVTFLAV---------LSGCSHGGLEDKG-------LEMFDEM 340

Query: 356 YSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTV 415
            +  +E+EA            +  +  +I    + G  EEA  L ++M      P     
Sbjct: 341 MNGGDEIEAG-----------IEHYGCVIDLLGRAGRVEEAFELIKKM---PFEPTAAIW 386

Query: 416 SSILSACAQLGAISLGKWVH-ELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMS 474
            S+L AC      ++G++V   L++     +  YV   L ++YA  G   + R + +LM 
Sbjct: 387 GSLLGACRVHSNTNIGEFVGCRLLEIEPENAGNYV--ILSNLYASAGRWEDVRNVRELMM 444

Query: 475 HKS 477
            K+
Sbjct: 445 EKA 447



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 52/155 (33%), Positives = 82/155 (52%), Gaps = 9/155 (5%)

Query: 418 ILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKS 477
           +L+ C    A+  G+ VH  +    +   +Y+ST LI +Y KC  +  AR +FD M  ++
Sbjct: 16  LLNECVNKRAVREGQRVHAHMIKTCYLPPVYLSTRLIILYTKCECLGCARHVFDEMRERN 75

Query: 478 EVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQ 537
            V+W  MISGY   G   EAL LF +ML S   P+  TF +VL +C+       G +   
Sbjct: 76  VVSWTAMISGYSQRGFASEALHLFVQMLRSDTEPNEFTFATVLSSCTGFSGFELGRQ--- 132

Query: 538 SMIHDHGFKPLAEHY----ACMVDILGRAGQLEKA 568
             IH H FK   E++    + ++D+  +AG++ +A
Sbjct: 133 --IHSHIFKRNYENHIFVGSSLLDMYAKAGRIHEA 165


>gi|449490721|ref|XP_004158687.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g21065-like [Cucumis sativus]
          Length = 609

 Score =  427 bits (1098), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 214/522 (40%), Positives = 322/522 (61%), Gaps = 1/522 (0%)

Query: 264 AELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERV-NSSTIVGLIPVFY 322
           A  +F  I  P++ + N MI G+  +     ++ LF Q+ A++  + ++ T   L     
Sbjct: 88  AAQIFNQIQAPNIFTWNTMIRGFAESENPSPAVELFSQMHAASSILPDTHTFPFLFKAVA 147

Query: 323 PFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNA 382
               + L   IHS  +++G  S   V  +L  +YS L  + +A ++F+  S +   +WN+
Sbjct: 148 KLMDVSLGEGIHSVVVRNGFDSLRFVQNSLVHMYSVLGSLXSAYQVFEIMSYRDRVAWNS 207

Query: 383 MIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRN 442
           +I G+  NG+  EA++L++EM +  V P+  T+ S+LSAC +LGA++LG+ VH  +    
Sbjct: 208 VINGFALNGMPNEALTLYREMGSEGVEPDGFTMVSLLSACVELGALALGERVHMYMVKVG 267

Query: 443 FESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFS 502
              N + S AL+D+Y+KCGN  +A+++FD M  +S V+W ++I G  ++G G EAL+LF 
Sbjct: 268 LVQNQHASNALLDLYSKCGNFRDAQKVFDEMEERSVVSWTSLIVGLAVNGLGNEALKLFG 327

Query: 503 EMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRA 562
           E+   G++PS +TF+ VLYACSH G++ EG   F+ M  ++G  P  EH+ CMVD+L RA
Sbjct: 328 ELERQGLKPSEITFVGVLYACSHCGMLDEGFNYFRRMKEEYGILPRIEHHGCMVDLLCRA 387

Query: 563 GQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLS 622
           G++  A ++I+ + V P   +W  LLGAC IH    L  VA  ++  L+  + G  VLLS
Sbjct: 388 GKVGDAYDYIRNMPVPPNAVIWRTLLGACTIHGHLELGEVARAEIQRLEQRHSGDFVLLS 447

Query: 623 NIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLE 682
           N+Y++ER +L    VR+++  + + K PG +L+E+    + F  GD+ HPQS   YAML 
Sbjct: 448 NLYASERRWLDVQNVRKIMLMKGVKKTPGYSLVELKNRVYEFIMGDRSHPQSEETYAMLA 507

Query: 683 KLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLR 742
           K+   ++  G+   TV  L D+EEEEKE  +  H+EK+AIAF L+ T PGT IRI+KNLR
Sbjct: 508 KITQLLKIEGYVPRTVNVLADIEEEEKETALSHHTEKVAIAFMLVNTPPGTPIRIMKNLR 567

Query: 743 VCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           VC DCH A K ISKV  R I+VRD +RFHHFK G CSC DYW
Sbjct: 568 VCADCHLAIKLISKVFEREIIVRDRSRFHHFKDGSCSCKDYW 609



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 92/348 (26%), Positives = 168/348 (48%), Gaps = 5/348 (1%)

Query: 148 ALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTW 207
           ALV L    S+   A ++F+++   +   WN+MI G  ++     ++ +F  M       
Sbjct: 77  ALVSLSAPMSF---AAQIFNQIQAPNIFTWNTMIRGFAESENPSPAVELFSQMHAASSIL 133

Query: 208 LDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELL 267
            D+ +   +  AVA++ ++ LG  I  + ++ GF    +V   LV  YS  G +  A  +
Sbjct: 134 PDTHTFPFLFKAVAKLMDVSLGEGIHSVVVRNGFDSLRFVQNSLVHMYSVLGSLXSAYQV 193

Query: 268 FRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHL 327
           F  +   D ++ N++I+G+  NG    +L L+R++ +     +  T+V L+      G L
Sbjct: 194 FEIMSYRDRVAWNSVINGFALNGMPNEALTLYREMGSEGVEPDGFTMVSLLSACVELGAL 253

Query: 328 HLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGY 387
            L   +H + +K G+V N     AL  +YS+      A+K+FDE  E+S+ SW ++I G 
Sbjct: 254 ALGERVHMYMVKVGLVQNQHASNALLDLYSKCGNFRDAQKVFDEMEERSVVSWTSLIVGL 313

Query: 388 TQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLG-KWVHELVKSRNFESN 446
             NGL  EA+ LF E++   + P+ +T   +L AC+  G +  G  +   + +       
Sbjct: 314 AVNGLGNEALKLFGELERQGLKPSEITFVGVLYACSHCGMLDEGFNYFRRMKEEYGILPR 373

Query: 447 IYVSTALIDMYAKCGNIVEARELFDLMS-HKSEVTWNTMISGYGLHGH 493
           I     ++D+  + G + +A +    M    + V W T++    +HGH
Sbjct: 374 IEHHGCMVDLLCRAGKVGDAYDYIRNMPVPPNAVIWRTLLGACTIHGH 421



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 107/414 (25%), Positives = 184/414 (44%), Gaps = 36/414 (8%)

Query: 21  TQSQLTQTHAQIIIHGFQNDLSTVTK-LAHRLSDFKAT-CYARALFFSIPKPDLFLFNVI 78
           +QS+L Q HA  I HG         K L   L    A   +A  +F  I  P++F +N +
Sbjct: 47  SQSKLKQIHAFSIRHGVPPQNPDFNKHLIFALVSLSAPMSFAAQIFNQIQAPNIFTWNTM 106

Query: 79  IRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSG 138
           IRGF+ +E P  ++  ++ +   +++ PD  T+ F+  A +   D S+G  +H   + +G
Sbjct: 107 IRGFAESENPSPAVELFSQMHAASSILPDTHTFPFLFKAVAKLMDVSLGEGIHSVVVRNG 166

Query: 139 YGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFG 198
           + S  FV  +LV +Y     + SA +VF+ M  +D V WNS+I+G   N    +++ ++ 
Sbjct: 167 FDSLRFVQNSLVHMYSVLGSLXSAYQVFEIMSYRDRVAWNSVINGFALNGMPNEALTLYR 226

Query: 199 DMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKC 258
           +M  + G   D  ++ ++L A  E+  L LG  +    +K+G   + +    L+  YSKC
Sbjct: 227 EM-GSEGVEPDGFTMVSLLSACVELGALALGERVHMYMVKVGLVQNQHASNALLDLYSKC 285

Query: 259 GEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLI 318
           G    A+ +F ++    ++S  ++I G   NG    +L+LF +L     + +  T VG+ 
Sbjct: 286 GNFRDAQKVFDEMEERSVVSWTSLIVGLAVNGLGNEALKLFGELERQGLKPSEITFVGV- 344

Query: 319 PVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLA 378
                     L  C H   L  G     +    +   Y  L  +E               
Sbjct: 345 ----------LYACSHCGMLDEGF----NYFRRMKEEYGILPRIE--------------- 375

Query: 379 SWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGK 432
               M+    + G   +A    + M    V PN V   ++L AC   G + LG+
Sbjct: 376 HHGCMVDLLCRAGKVGDAYDYIRNM---PVPPNAVIWRTLLGACTIHGHLELGE 426


>gi|357124213|ref|XP_003563798.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Brachypodium distachyon]
          Length = 637

 Score =  427 bits (1098), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 223/571 (39%), Positives = 332/571 (58%), Gaps = 1/571 (0%)

Query: 215 AVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRP 274
           +VL +    + L  G ++    L  G      + T LV  Y+ CG V  A  LF  + + 
Sbjct: 67  SVLQSCVASRSLGTGRQLHGRLLVSGLGPDTVLATKLVDLYAACGLVGHARRLFDGMPKR 126

Query: 275 DLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIH 334
           ++   N +I  Y  +G  E +++L+R ++      ++ T    +        L     +H
Sbjct: 127 NVFLWNVLIRAYARDGPHEVAIQLYRGMVDYGVEPDNFTYPLALKACAALLDLETGREVH 186

Query: 335 SFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTE 394
              L +    +  V   L  +Y++   ++ AR +FD    +    WN+MIA Y QNG   
Sbjct: 187 ERVLGTHWGEDMFVCAGLVDMYAKCGCVDDARAVFDRIRVRDSVVWNSMIAAYGQNGRPM 246

Query: 395 EAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALI 454
           EA+SL ++M A+ V P   T+ S +SA A   A+  G+ +H     R F+    + T+L+
Sbjct: 247 EALSLCRDMAANGVGPTIATLVSTISAAADAAALPRGRELHGFGWRRGFDRQDKLKTSLV 306

Query: 455 DMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEM-LHSGIRPSG 513
           DMYAK G +  AR LF+ +  +  V+WN MI GYG+HGH  EAL+LF++M + + + P  
Sbjct: 307 DMYAKSGWVQVARVLFEQLMKRELVSWNAMICGYGMHGHFDEALKLFNKMRVEAQVTPDN 366

Query: 514 VTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIK 573
           +TF+ VL AC+H G+V+E  E F  M+  +  KP  +H+ C+VD+LG AG+ E+A + IK
Sbjct: 367 ITFVGVLSACNHGGMVKEAKEFFGLMVDVYSIKPTVQHFTCLVDVLGHAGRFEEAYDLIK 426

Query: 574 GLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQ 633
           G+ ++P   +WGALL  C IHK+  L  +A +KL EL+PE+ G +VLLSNIY+    + +
Sbjct: 427 GMPMQPDSGIWGALLNGCKIHKNVELGELALQKLIELEPEDAGNYVLLSNIYAQSGKWEK 486

Query: 634 AATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGF 693
           AA VR+++  R L K  GC+ IE+ G  H F  GD  HP+S  IY  LE+L G M +AG+
Sbjct: 487 AARVRKLMTNRGLKKIIGCSWIELKGKTHGFLVGDASHPRSAEIYEELERLEGLMSDAGY 546

Query: 694 QTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKF 753
             +T+   HDV ++EK  MM+ HSE+LAIAFGLI+T  GT++ + KNLRVC DCH   K 
Sbjct: 547 MPDTMPVFHDVGDDEKRNMMRSHSERLAIAFGLISTPSGTKLLVTKNLRVCEDCHVVIKL 606

Query: 754 ISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           IS++  R I++RD NR+HHF  G CSC DYW
Sbjct: 607 ISQIVQREIIIRDVNRYHHFVNGECSCKDYW 637



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 135/482 (28%), Positives = 233/482 (48%), Gaps = 52/482 (10%)

Query: 5   TPQSRNLFLSLLKGAKTQSQL---TQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATC--- 58
           +P S + + S+L+       L    Q H ++++ G   D    T LA +L D  A C   
Sbjct: 58  SPNSYHHYTSVLQSCVASRSLGTGRQLHGRLLVSGLGPD----TVLATKLVDLYAACGLV 113

Query: 59  -YARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSA 117
            +AR LF  +PK ++FL+NV+IR ++ +   + +I  Y  +  +  + PDNFTY   L A
Sbjct: 114 GHARRLFDGMPKRNVFLWNVLIRAYARDGPHEVAIQLYRGM-VDYGVEPDNFTYPLALKA 172

Query: 118 ASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLW 177
            +A  D   G  +H   + + +G D+FV A LVD+Y K   V  AR VFD++  +D+V+W
Sbjct: 173 CAALLDLETGREVHERVLGTHWGEDMFVCAGLVDMYAKCGCVDDARAVFDRIRVRDSVVW 232

Query: 178 NSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGL 237
           NSMI+   +N    +++ +  DM  NG     +T V+ +  A A+   L  G E+   G 
Sbjct: 233 NSMIAAYGQNGRPMEALSLCRDMAANGVGPTIATLVSTI-SAAADAAALPRGRELHGFGW 291

Query: 238 KLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLR 297
           + GF     + T LV  Y+K G V+ A +LF  +++ +L+S NAMI GY  +G  + +L+
Sbjct: 292 RRGFDRQDKLKTSLVDMYAKSGWVQVARVLFEQLMKRELVSWNAMICGYGMHGHFDEALK 351

Query: 298 LFRQLLASAERV-NSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALST-V 355
           LF ++   A+   ++ T VG++                S C   G+V  +     L   V
Sbjct: 352 LFNKMRVEAQVTPDNITFVGVL----------------SACNHGGMVKEAKEFFGLMVDV 395

Query: 356 YSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTV 415
           Y               S + ++  +  ++      G  EEA  L + M    + P+    
Sbjct: 396 Y---------------SIKPTVQHFTCLVDVLGHAGRFEEAYDLIKGM---PMQPDSGIW 437

Query: 416 SSILSACAQLGAISLGKW-VHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMS 474
            ++L+ C     + LG+  + +L++    ++  YV   L ++YA+ G   +A  +  LM+
Sbjct: 438 GALLNGCKIHKNVELGELALQKLIELEPEDAGNYV--LLSNIYAQSGKWEKAARVRKLMT 495

Query: 475 HK 476
           ++
Sbjct: 496 NR 497



 Score = 69.7 bits (169), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 45/177 (25%), Positives = 85/177 (48%), Gaps = 6/177 (3%)

Query: 416 SSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSH 475
           +S+L +C    ++  G+ +H  +       +  ++T L+D+YA CG +  AR LFD M  
Sbjct: 66  TSVLQSCVASRSLGTGRQLHGRLLVSGLGPDTVLATKLVDLYAACGLVGHARRLFDGMPK 125

Query: 476 KSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEI 535
           ++   WN +I  Y   G    A+QL+  M+  G+ P   T+   L AC+    +  G E+
Sbjct: 126 RNVFLWNVLIRAYARDGPHEVAIQLYRGMVDYGVEPDNFTYPLALKACAALLDLETGREV 185

Query: 536 FQSMIHDHGFKPLAEHYAC--MVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGA 590
            + ++  H  + +   + C  +VD+  + G ++ A      + V     VW +++ A
Sbjct: 186 HERVLGTHWGEDM---FVCAGLVDMYAKCGCVDDARAVFDRIRVRDS-VVWNSMIAA 238


>gi|147819295|emb|CAN68962.1| hypothetical protein VITISV_019277 [Vitis vinifera]
          Length = 676

 Score =  427 bits (1098), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 232/655 (35%), Positives = 379/655 (57%), Gaps = 11/655 (1%)

Query: 12  FLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKAT-----C--YARALF 64
           + SLL+   ++  +  T  QI  H     L +     H LS   A      C  +AR LF
Sbjct: 21  YQSLLQRCTSRKSIPNT-KQIHAHTITLGLLSSPYSHHLLSSLAAAYAMCGCAPHARKLF 79

Query: 65  FSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDR 124
             +  P LF +N +IR ++N+ +   ++  +  +  +    PDN+TY FV+ A       
Sbjct: 80  DELRNPSLFSWNAMIRMYTNSGLSYDALGLFVQMLASGRRWPDNYTYPFVIKACGDYLLP 139

Query: 125 SIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGL 184
            +G L+H   ++SG+ SD FV  +L+ +Y     ++ AR+VFD M E+  V WN+MI+G 
Sbjct: 140 EMGALIHARTVMSGFDSDAFVQNSLMAMYMNCGEMEVARRVFDLMRERTLVSWNTMINGY 199

Query: 185 MKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDH 244
            KN C ++++ VF  M+   G   D  +V +VLP  + ++EL +G  +  L       + 
Sbjct: 200 FKNGCVKEALMVFDWMI-GKGIEPDCATVVSVLPVCSYLKELEVGRRVHALVEVKNLGED 258

Query: 245 VYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLA 304
           + V   L+  Y+KCG ++ A+++F ++ + D++S   M++GY  NG   S+L L + +  
Sbjct: 259 ISVWNSLLDMYAKCGNMDEAQMIFYEMDKRDVVSWTTMMNGYILNGDARSALLLCQMMQF 318

Query: 305 SAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEA 364
            + + N  T+  ++        L    C+H + ++  + S   V TAL  +Y++ N +  
Sbjct: 319 ESVKPNFVTLASVLSACASLYSLKHGRCLHGWAIRQKLESEVIVETALIDMYAKCNNVNL 378

Query: 365 ARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQ 424
           + ++F + S++  A WNA+I+G   NGL+ +AI LF++M    V PN  T++S+L A A 
Sbjct: 379 SFRVFSKXSKQRTAPWNAIISGCIHNGLSRKAIELFKQMLMEAVDPNDATLNSLLPAYAF 438

Query: 425 LGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSE--VTWN 482
           L  +   + +H  +    F S I V+T LID+Y+KCG++  A  +F+ +  K +  +TW+
Sbjct: 439 LTDLQQARNMHGYLIRSGFLSRIEVATILIDIYSKCGSLESAHNIFNGIPKKDKDIITWS 498

Query: 483 TMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHD 542
            +I+GYG+HGHG  A+ LF +M+ SG++P+ +TF S+L+ACSHAGLV EG  +F+ M+ D
Sbjct: 499 AIIAGYGMHGHGETAISLFDQMVQSGVKPNEITFTSILHACSHAGLVDEGLGLFKFMLED 558

Query: 543 HGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARV 602
           +      +HY C++D+LGRAG+LE+A E I+ +A  P  AVWGALLG+C+IH++  L  V
Sbjct: 559 NQMSLRTDHYTCVIDLLGRAGRLEEAYELIRTMAFRPNHAVWGALLGSCVIHENVELGEV 618

Query: 603 ASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEV 657
           A++ LFEL+P N G +VLL+NIYSA   +  A  VR ++    L K P  +LIEV
Sbjct: 619 AAKWLFELEPGNTGNYVLLANIYSAVGRWRDAEHVRLMMNNIGLRKTPAHSLIEV 673


>gi|359473281|ref|XP_003631282.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g40405-like [Vitis vinifera]
          Length = 615

 Score =  427 bits (1097), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 211/469 (44%), Positives = 301/469 (64%), Gaps = 4/469 (0%)

Query: 316 GLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEK 375
           GLI ++   G L   + + S   +  +V  +++++A +    ++ ++  ARKLFD+ S K
Sbjct: 151 GLIYMYAELGGLDACHRVFSSICEPDLVCQTAMVSACA----KMGDVGFARKLFDKMSHK 206

Query: 376 SLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVH 435
              +WNAMI+GY Q G + EA+SLF  MQ   V  N V++ S+LSAC+ LGA+  G+W H
Sbjct: 207 DPIAWNAMISGYVQCGQSREALSLFNLMQREGVKVNEVSMVSVLSACSHLGALDQGRWAH 266

Query: 436 ELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGL 495
             ++       + + TALIDMYAKCGN+ +A E+F  M  K+  TW++ I G  ++G G 
Sbjct: 267 AYIERNKLRMTLTLGTALIDMYAKCGNMNKAMEVFWGMKEKNVYTWSSAIGGLAMNGAGE 326

Query: 496 EALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACM 555
           + L+LFS M    ++P+ +TF+SVL  CS  GLV EG + F+SM   +G +P  EHY CM
Sbjct: 327 KCLELFSLMKQDSVQPNEITFVSVLRGCSVVGLVEEGRKHFESMSKVYGIEPRLEHYGCM 386

Query: 556 VDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENV 615
           VD+ GRAG L++AL FI  + V P    WGALL AC I+++  +  +AS K+ EL+ +N 
Sbjct: 387 VDLYGRAGHLDEALNFINSMPVRPHVGAWGALLNACKIYRNMEMGELASRKIVELEAKNH 446

Query: 616 GYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQST 675
           G +VLLSNIY+  +D+ + + VRQ +  + + K PGC++IEVGG  H F  GD+ HP+  
Sbjct: 447 GAYVLLSNIYADSKDWDRVSNVRQTMNVKGVRKQPGCSVIEVGGEVHEFFVGDKSHPRYA 506

Query: 676 AIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEI 735
            I  ML +++ +++ +G+   T     D+EEEEKE  + +HSEK+AIAFGLI+  P   I
Sbjct: 507 EIQVMLGEISRRLKLSGYVANTNPVFFDIEEEEKEDALCMHSEKIAIAFGLISLSPDVPI 566

Query: 736 RIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           RI+KNLRVC DCH ATK ISK   R IVVRD NRFHHF+ G CSC  YW
Sbjct: 567 RIVKNLRVCWDCHDATKMISKAFNREIVVRDRNRFHHFRDGECSCKGYW 615



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 110/459 (23%), Positives = 190/459 (41%), Gaps = 78/459 (16%)

Query: 13  LSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHR--LSDFKATCYARALFFSIPKP 70
           +S+++   T  +L Q H Q++I+G  ND   V +      L++     Y+  +  +   P
Sbjct: 13  ISMVEPCTTLRELKQIHTQLLINGLLNDPQLVGQFVASIALNNPNNLHYSNQVLDNSQNP 72

Query: 71  DLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTA-LTPDNFTYSFVLSAASACCDRSIGVL 129
            LF FN +IR  S +  P  S  FY+ +  +   L PDN+T++F++  ++       G  
Sbjct: 73  TLFTFNSMIRAHSKSSTPHRSFHFYSRILHSAGYLAPDNYTFTFLVRTSAQLLAHGTGSS 132

Query: 130 LHGHAIVSGYGSDLFVGAALVDLY-------------------------------FKFSW 158
           +HG A+  G+  D  V + L+ +Y                                K   
Sbjct: 133 VHGAAVKYGFEYDPHVQSGLIYMYAELGGLDACHRVFSSICEPDLVCQTAMVSACAKMGD 192

Query: 159 VKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLP 218
           V  ARK+FDKM  KD + WN+MISG ++    ++++ +F  M R  G  ++  S+ +VL 
Sbjct: 193 VGFARKLFDKMSHKDPIAWNAMISGYVQCGQSREALSLFNLMQRE-GVKVNEVSMVSVLS 251

Query: 219 AVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLIS 278
           A + +  L  G        +      + + T L+  Y+KCG + +A  +F  +   ++ +
Sbjct: 252 ACSHLGALDQGRWAHAYIERNKLRMTLTLGTALIDMYAKCGNMNKAMEVFWGMKEKNVYT 311

Query: 279 CNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCL 338
            ++ I G   NG  E  L LF  +   + + N  T V                       
Sbjct: 312 WSSAIGGLAMNGAGEKCLELFSLMKQDSVQPNEITFV----------------------- 348

Query: 339 KSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESS-----EKSLASWNAMIAGYTQNGLT 393
                   SVL   S V      +E  RK F+  S     E  L  +  M+  Y + G  
Sbjct: 349 --------SVLRGCSVV----GLVEEGRKHFESMSKVYGIEPRLEHYGCMVDLYGRAGHL 396

Query: 394 EEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGK 432
           +EA++    M    V P+     ++L+AC     + +G+
Sbjct: 397 DEALNFINSM---PVRPHVGAWGALLNACKIYRNMEMGE 432



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 82/313 (26%), Positives = 140/313 (44%), Gaps = 44/313 (14%)

Query: 333 IHSFCLKSGIVSNSSVLTAL--STVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQN 390
           IH+  L +G++++  ++     S   +  N +  + ++ D S   +L ++N+MI  ++++
Sbjct: 28  IHTQLLINGLLNDPQLVGQFVASIALNNPNNLHYSNQVLDNSQNPTLFTFNSMIRAHSKS 87

Query: 391 GLTEEAISLFQEM--QASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIY 448
                +   +  +   A  +AP+  T + ++   AQL A   G  VH       FE + +
Sbjct: 88  STPHRSFHFYSRILHSAGYLAPDNYTFTFLVRTSAQLLAHGTGSSVHGAAVKYGFEYDPH 147

Query: 449 VSTALIDMYA-------------------------------KCGNIVEARELFDLMSHKS 477
           V + LI MYA                               K G++  AR+LFD MSHK 
Sbjct: 148 VQSGLIYMYAELGGLDACHRVFSSICEPDLVCQTAMVSACAKMGDVGFARKLFDKMSHKD 207

Query: 478 EVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQ 537
            + WN MISGY   G   EAL LF+ M   G++ + V+ +SVL ACSH G + +G     
Sbjct: 208 PIAWNAMISGYVQCGQSREALSLFNLMQREGVKVNEVSMVSVLSACSHLGALDQG-RWAH 266

Query: 538 SMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDT 597
           + I  +  +        ++D+  + G + KA+E   G+  E     W + +G   ++   
Sbjct: 267 AYIERNKLRMTLTLGTALIDMYAKCGNMNKAMEVFWGMK-EKNVYTWSSAIGGLAMNG-- 323

Query: 598 NLARVASEKLFEL 610
                A EK  EL
Sbjct: 324 -----AGEKCLEL 331



 Score =  106 bits (264), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 81/359 (22%), Positives = 153/359 (42%), Gaps = 34/359 (9%)

Query: 162 ARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWL-DSTSVAAVLPAV 220
           + +V D         +NSMI    K+     S   +  ++ + G    D+ +   ++   
Sbjct: 62  SNQVLDNSQNPTLFTFNSMIRAHSKSSTPHRSFHFYSRILHSAGYLAPDNYTFTFLVRTS 121

Query: 221 AEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDL---- 276
           A++     G  +    +K GF    +V +GL+  Y++ G ++    +F  I  PDL    
Sbjct: 122 AQLLAHGTGSSVHGAAVKYGFEYDPHVQSGLIYMYAELGGLDACHRVFSSICEPDLVCQT 181

Query: 277 ---------------------------ISCNAMISGYTCNGKTESSLRLFRQLLASAERV 309
                                      I+ NAMISGY   G++  +L LF  +     +V
Sbjct: 182 AMVSACAKMGDVGFARKLFDKMSHKDPIAWNAMISGYVQCGQSREALSLFNLMQREGVKV 241

Query: 310 NSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLF 369
           N  ++V ++      G L      H++  ++ +    ++ TAL  +Y++   M  A ++F
Sbjct: 242 NEVSMVSVLSACSHLGALDQGRWAHAYIERNKLRMTLTLGTALIDMYAKCGNMNKAMEVF 301

Query: 370 DESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAIS 429
               EK++ +W++ I G   NG  E+ + LF  M+   V PN +T  S+L  C+ +G + 
Sbjct: 302 WGMKEKNVYTWSSAIGGLAMNGAGEKCLELFSLMKQDSVQPNEITFVSVLRGCSVVGLVE 361

Query: 430 LG-KWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEV-TWNTMIS 486
            G K    + K    E  +     ++D+Y + G++ EA    + M  +  V  W  +++
Sbjct: 362 EGRKHFESMSKVYGIEPRLEHYGCMVDLYGRAGHLDEALNFINSMPVRPHVGAWGALLN 420


>gi|297744892|emb|CBI38389.3| unnamed protein product [Vitis vinifera]
          Length = 614

 Score =  427 bits (1097), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 225/581 (38%), Positives = 345/581 (59%), Gaps = 7/581 (1%)

Query: 208 LDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELL 267
           LD   + ++L     + ++   + I    ++ G     +++  L+   SKC  ++ A  +
Sbjct: 37  LDQKQIISLLQRSRHINQV---LPIHAQLIRNGHSQDPFMVFELLRSCSKCHAIDYASRI 93

Query: 268 FRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHL 327
           F+    P++    A+I G+  +G    +++L+ ++L  +   ++  +  ++        L
Sbjct: 94  FQYTHNPNVYLYTALIDGFVSSGNYLEAIQLYSRMLHESILPDNYLMASILKACGSQLAL 153

Query: 328 HLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLAS----WNAM 383
                +HS  LK G  SN  V   +  +Y +  E+  AR++F+E  E  +A     W AM
Sbjct: 154 REGREVHSRALKLGFSSNRLVRLRIMELYGKCGELGDARRVFEEMPEDVVAKDTVCWTAM 213

Query: 384 IAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNF 443
           I G+ +N  T  A+  F+ MQ   V PN  T+  +LSAC+QLGA+ +G+WVH  ++    
Sbjct: 214 IDGFVRNEETNRALEAFRGMQGENVRPNEFTIVCVLSACSQLGALEIGRWVHSYMRKFEI 273

Query: 444 ESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSE 503
           E N++V  ALI+MY++CG+I EA+ +FD M  +  +T+NTMISG  ++G   +A++LF  
Sbjct: 274 ELNLFVGNALINMYSRCGSIDEAQTVFDEMKDRDVITYNTMISGLSMNGKSRQAIELFRV 333

Query: 504 MLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAG 563
           M+   +RP+ VTF+ VL ACSH GLV  G EIF SM  D+  +P  EHY CMVD+LGR G
Sbjct: 334 MVGRRLRPTNVTFVGVLNACSHGGLVDFGFEIFHSMARDYRVEPQIEHYGCMVDLLGRVG 393

Query: 564 QLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSN 623
           +LE+A + I+ + + P   + G LL AC +HK+  L    +++L +    + G +VLLS+
Sbjct: 394 RLEEAYDLIRTMKMTPDHIMLGTLLSACKMHKNLELGEQVAKELEDRGQADSGTYVLLSH 453

Query: 624 IYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEK 683
           +Y++   + +AA VR  +K+  + K PGC+ IEV    H F  GD  HPQ   IY  LE+
Sbjct: 454 VYASSGKWKEAAQVRAKMKEAGMQKEPGCSSIEVNNEIHEFLLGDLRHPQKERIYEKLEE 513

Query: 684 LNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRV 743
           LN  +R  G+  E    L D+E+ EKE  + +HSE+LAI +GLI+TEP T IR++KNLRV
Sbjct: 514 LNRLLRLEGYHPEKEVVLQDIEDGEKEWALAMHSERLAICYGLISTEPCTMIRVMKNLRV 573

Query: 744 CLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           C DCH+A K I+K+T R IVVRD NRFH+F+ G CSCGDYW
Sbjct: 574 CYDCHSAIKLIAKITRRKIVVRDRNRFHYFENGACSCGDYW 614



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 122/473 (25%), Positives = 223/473 (47%), Gaps = 43/473 (9%)

Query: 2   SMKTPQSRNLFLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYAR 61
           S+K+   + + +SLL+ ++  +Q+   HAQ+I +G   D   V +L    S   A  YA 
Sbjct: 33  SLKSLDQKQI-ISLLQRSRHINQVLPIHAQLIRNGHSQDPFMVFELLRSCSKCHAIDYAS 91

Query: 62  ALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASAC 121
            +F     P+++L+  +I GF ++     +I  Y+ +   + L PDN+  + +L A  + 
Sbjct: 92  RIFQYTHNPNVYLYTALIDGFVSSGNYLEAIQLYSRMLHESIL-PDNYLMASILKACGSQ 150

Query: 122 CDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPE----KDTVLW 177
                G  +H  A+  G+ S+  V   +++LY K   +  AR+VF++MPE    KDTV W
Sbjct: 151 LALREGREVHSRALKLGFSSNRLVRLRIMELYGKCGELGDARRVFEEMPEDVVAKDTVCW 210

Query: 178 NSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGL 237
            +MI G ++N     ++  F  M +      +  ++  VL A +++  L +G  +     
Sbjct: 211 TAMIDGFVRNEETNRALEAFRGM-QGENVRPNEFTIVCVLSACSQLGALEIGRWVHSYMR 269

Query: 238 KLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLR 297
           K     +++V   L++ YS+CG ++ A+ +F ++   D+I+ N MISG + NGK+  ++ 
Sbjct: 270 KFEIELNLFVGNALINMYSRCGSIDEAQTVFDEMKDRDVITYNTMISGLSMNGKSRQAIE 329

Query: 298 LFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYS 357
           LFR ++    R  + T VG+           L  C H   +  G      +  +++  Y 
Sbjct: 330 LFRVMVGRRLRPTNVTFVGV-----------LNACSHGGLVDFGF----EIFHSMARDY- 373

Query: 358 RLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSS 417
                           E  +  +  M+    + G  EEA  L + M   K+ P+ + + +
Sbjct: 374 --------------RVEPQIEHYGCMVDLLGRVGRLEEAYDLIRTM---KMTPDHIMLGT 416

Query: 418 ILSACAQLGAISLGKWVHELVKSR-NFESNIYVSTALIDMYAKCGNIVEAREL 469
           +LSAC     + LG+ V + ++ R   +S  YV   L  +YA  G   EA ++
Sbjct: 417 LLSACKMHKNLELGEQVAKELEDRGQADSGTYV--LLSHVYASSGKWKEAAQV 467


>gi|414876354|tpg|DAA53485.1| TPA: hypothetical protein ZEAMMB73_494075 [Zea mays]
          Length = 830

 Score =  427 bits (1097), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 221/552 (40%), Positives = 332/552 (60%), Gaps = 9/552 (1%)

Query: 241 FHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFR 300
           F    ++ T L+  Y+    +  A  +F +    ++   NAM+         E +L    
Sbjct: 280 FRSDPFLSTRLIEAYAALSALPAARQVFDEAPVKNIFVWNAMLKALALADHGEEALTCLA 339

Query: 301 QLLASAERVNSSTIVGLIPVFYPFGHLHLTNC-----IHSFCLKSGIVSNSSVLTALSTV 355
            +      V+S +    +         HL        +H+  ++ G   ++ V T L   
Sbjct: 340 DMGRLGVPVDSYSYAHGLKACIAASASHLPASARVREMHAHAIRRGYGLHTHVATTLIDC 399

Query: 356 YSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASK--VAPNPV 413
           Y++L  +  A ++F    +++L SW+AMI  Y +N    +AI +FQEM AS   + PN +
Sbjct: 400 YAKLGIVSYAERVFTSMPDRNLVSWSAMIGCYAKNERPGDAIQIFQEMMASDADLVPNSI 459

Query: 414 TVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLM 473
           T+ S+L ACA + A+  GK +H  +  R F+  + V  AL+ MY KCG +   R +F+ +
Sbjct: 460 TIVSVLHACAGVNALGQGKVLHAYILRRGFDLLVSVLNALMAMYMKCGCLETGRYIFNWI 519

Query: 474 SHKSEV-TWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREG 532
             +  V +WN++ISGYG+HG G E+LQ+F EM+  GI P+ +TF+SVL ACSH GLV +G
Sbjct: 520 GRRRNVVSWNSLISGYGMHGFGRESLQVFEEMIEEGISPNIITFVSVLGACSHVGLVEQG 579

Query: 533 DEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACM 592
            ++F+SM+ ++   P AEHYACMVD+LGRAG+L++A+E I+ + ++P P VWG+LLGAC 
Sbjct: 580 KKLFESMV-EYNVTPRAEHYACMVDLLGRAGRLDEAVELIQSMRIQPSPQVWGSLLGACR 638

Query: 593 IHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGC 652
           IH     A +A   LF+L+P N G +VLL++IY+  +   Q   +++++++  L K PGC
Sbjct: 639 IHGHVEYAEMACSHLFDLEPRNAGNYVLLADIYARAKLQNQVDVLKELLEEHALEKVPGC 698

Query: 653 TLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELM 712
           + IEV    + F S D  +PQ   + A++ +   +M+  G+  +T + L+D+EEEEKE +
Sbjct: 699 SWIEVKKKLYSFVSVDNKNPQVEELQALIGEFVTQMKNEGYVPDTRSVLYDIEEEEKERI 758

Query: 713 MKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHH 772
           +  HSEKLA+AFGLI T  G  IRI KNLR+C DCH+ TKFISK T R IVVRD NRFHH
Sbjct: 759 LLGHSEKLAVAFGLIKTGSGEAIRITKNLRLCEDCHSVTKFISKFTDREIVVRDVNRFHH 818

Query: 773 FKGGVCSCGDYW 784
           F+ GVCSC DYW
Sbjct: 819 FRNGVCSCRDYW 830



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 116/448 (25%), Positives = 199/448 (44%), Gaps = 52/448 (11%)

Query: 37  FQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYT 96
           F++D    T+L    +   A   AR +F   P  ++F++N +++  +  +  + ++    
Sbjct: 280 FRSDPFLSTRLIEAYAALSALPAARQVFDEAPVKNIFVWNAMLKALALADHGEEALTCLA 339

Query: 97  HLRKNTALTPDNFTYSFVLSAASACCDRSIGVL-----LHGHAIVSGYGSDLFVGAALVD 151
            + +   +  D+++Y+  L A  A     +        +H HAI  GYG    V   L+D
Sbjct: 340 DMGR-LGVPVDSYSYAHGLKACIAASASHLPASARVREMHAHAIRRGYGLHTHVATTLID 398

Query: 152 LYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWL-DS 210
            Y K   V  A +VF  MP+++ V W++MI    KN    D+I +F +M+ +    + +S
Sbjct: 399 CYAKLGIVSYAERVFTSMPDRNLVSWSAMIGCYAKNERPGDAIQIFQEMMASDADLVPNS 458

Query: 211 TSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRD 270
            ++ +VL A A V  L  G  +    L+ GF   V VL  L++ Y KCG +E    +F  
Sbjct: 459 ITIVSVLHACAGVNALGQGKVLHAYILRRGFDLLVSVLNALMAMYMKCGCLETGRYIFNW 518

Query: 271 I-VRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHL 329
           I  R +++S N++ISGY  +G    SL++F +++            G+ P          
Sbjct: 519 IGRRRNVVSWNSLISGYGMHGFGRESLQVFEEMIEE----------GISP---------- 558

Query: 330 TNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLAS----WNAMIA 385
                       I++  SVL A S V      +E  +KLF+   E ++      +  M+ 
Sbjct: 559 -----------NIITFVSVLGACSHV----GLVEQGKKLFESMVEYNVTPRAEHYACMVD 603

Query: 386 GYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWV-HELVKSRNFE 444
              + G  +EA+ L Q M   ++ P+P    S+L AC   G +   +     L       
Sbjct: 604 LLGRAGRLDEAVELIQSM---RIQPSPQVWGSLLGACRIHGHVEYAEMACSHLFDLEPRN 660

Query: 445 SNIYVSTALIDMYAKCGNIVEA-RELFD 471
           +  YV  A I   AK  N V+  +EL +
Sbjct: 661 AGNYVLLADIYARAKLQNQVDVLKELLE 688



 Score = 69.3 bits (168), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 47/184 (25%), Positives = 90/184 (48%), Gaps = 2/184 (1%)

Query: 23  SQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGF 82
           +++ + HA  I  G+       T L    +      YA  +F S+P  +L  ++ +I  +
Sbjct: 372 ARVREMHAHAIRRGYGLHTHVATTLIDCYAKLGIVSYAERVFTSMPDRNLVSWSAMIGCY 431

Query: 83  SNNEMPKSSICFYTHLRKNTA-LTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGS 141
           + NE P  +I  +  +  + A L P++ T   VL A +       G +LH + +  G+  
Sbjct: 432 AKNERPGDAIQIFQEMMASDADLVPNSITIVSVLHACAGVNALGQGKVLHAYILRRGFDL 491

Query: 142 DLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVL-WNSMISGLMKNCCFQDSIWVFGDM 200
            + V  AL+ +Y K   +++ R +F+ +  +  V+ WNS+ISG   +   ++S+ VF +M
Sbjct: 492 LVSVLNALMAMYMKCGCLETGRYIFNWIGRRRNVVSWNSLISGYGMHGFGRESLQVFEEM 551

Query: 201 VRNG 204
           +  G
Sbjct: 552 IEEG 555


>gi|224066034|ref|XP_002302000.1| predicted protein [Populus trichocarpa]
 gi|222843726|gb|EEE81273.1| predicted protein [Populus trichocarpa]
          Length = 797

 Score =  427 bits (1097), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 260/771 (33%), Positives = 390/771 (50%), Gaps = 114/771 (14%)

Query: 125 SIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPE------------- 171
           S+   +H H I SG+     +   L+D+Y K S +  AR +FD++P+             
Sbjct: 30  SLARPVHAHMIASGFQPRGHILNRLIDIYSKSSKLNYARYLFDEIPQPDIVARTTLIAAY 89

Query: 172 --------------------KDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDST 211
                               +D+V +N+MI+    N     +I +F DM R+     D+ 
Sbjct: 90  SAAGDLKLSRKIFSDTPLGMRDSVFYNAMITAYSHNHDGHAAIELFCDMQRDNFR-PDNY 148

Query: 212 SVAAVLPAVAEVQEL-RLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGE---------V 261
           +  +VL A+A V E  +   ++ C  +K G      VL  L+S Y KC           +
Sbjct: 149 TFTSVLGALALVAEKEKHCQQLHCAVVKSGTGFVTSVLNALISSYVKCAASPSAQSSSLM 208

Query: 262 ERAELLFRDIVRPDLISC-------------------------------NAMISGYTCNG 290
             A  LF ++   D +S                                NAMISGY   G
Sbjct: 209 AEARKLFDEMPNRDELSWTTIITGYVKNNDLDAAKEFLNGTSKKLGVAWNAMISGYAHRG 268

Query: 291 KTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSS--- 347
               +  +FR+++ S  +++  T   +I V    G   L   +H++ LK+  V+N +   
Sbjct: 269 LYLEAFEMFRKMIMSKIQLDEFTFTSVISVCANAGCFRLGKEMHAYFLKT--VANPAPDV 326

Query: 348 ---VLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYT---------------- 388
              V  AL T Y +  +++ A+++F++  E+ L SWN +++GY                 
Sbjct: 327 AMPVNNALITFYWKCGKVDIAQEIFNKMPERDLVSWNIILSGYVNVRCMDEAKSFFNEMP 386

Query: 389 ---------------QNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKW 433
                          Q G  EEA+  F  M+     P     +  + +C+ LG++  G+ 
Sbjct: 387 EKNILSWIIMISGLAQIGFAEEALKFFNRMKLQGFEPCDYAFAGAIISCSVLGSLKHGRQ 446

Query: 434 VHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGH 493
           +H  V    +ES++    ALI MYA+CG +  A  LF  M     ++WN MI+  G HG 
Sbjct: 447 LHAQVVRYGYESSLSAGNALITMYARCGVVDAAHCLFINMPCVDAISWNAMIAALGQHGQ 506

Query: 494 GLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYA 553
           G +A++LF EML  GI P  ++FL+V+ ACSHAGLV+EG + F SM + +G  P  EHYA
Sbjct: 507 GTQAIELFEEMLKEGILPDRISFLTVISACSHAGLVKEGRKYFDSMHNVYGVNPDEEHYA 566

Query: 554 CMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPE 613
            ++D+L RAG+  +A E ++ +  EPG  +W ALL  C IH + +L   A+E+LFEL P+
Sbjct: 567 RIIDLLCRAGKFSEAKEVMESMPFEPGAPIWEALLAGCRIHGNIDLGIEAAERLFELKPQ 626

Query: 614 NVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQ 673
           + G +VLLSN+Y+    +   A VR++++ R + K PGC+ IEV    H F  GD  HP+
Sbjct: 627 HDGTYVLLSNMYAVAGQWNDMAKVRKLMRDRGVKKEPGCSWIEVENKVHSFLVGDANHPE 686

Query: 674 STAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGT 733
              IY  LE+L  +MR+ G+  +T   LHDVE + KE  +  HSEKLA+A+G +    G 
Sbjct: 687 VRQIYNYLEQLVLEMRKIGYVPDTKCVLHDVESDLKEHELSTHSEKLAVAYGFMKLPHGA 746

Query: 734 EIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
            +R+ KNLR+C DCH A KF+SKV GR IVVRD  RFHHF+ G CSCGDYW
Sbjct: 747 TVRVFKNLRICGDCHNAFKFMSKVVGREIVVRDGKRFHHFRDGKCSCGDYW 797



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 165/669 (24%), Positives = 273/669 (40%), Gaps = 134/669 (20%)

Query: 3   MKTPQS----RNLFLSLLKGAKTQSQLTQT-----HAQIIIHGFQNDLSTVTKLAHRLSD 53
           M TP S     N + SLL+    QS ++ +     HA +I  GFQ     + +L    S 
Sbjct: 1   MTTPDSIRTAANRYGSLLQICCLQSPISYSLARPVHAHMIASGFQPRGHILNRLIDIYSK 60

Query: 54  FKATCYARALFFSIPKPDL---------------------------------FLFNVIIR 80
                YAR LF  IP+PD+                                   +N +I 
Sbjct: 61  SSKLNYARYLFDEIPQPDIVARTTLIAAYSAAGDLKLSRKIFSDTPLGMRDSVFYNAMIT 120

Query: 81  GFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGV-LLHGHAIVSGY 139
            +S+N    ++I  +  ++++    PDN+T++ VL A +   ++      LH   + SG 
Sbjct: 121 AYSHNHDGHAAIELFCDMQRDN-FRPDNYTFTSVLGALALVAEKEKHCQQLHCAVVKSGT 179

Query: 140 GSDLFVGAALVDLYFK---------FSWVKSARKVFDKMPEKDT---------------- 174
           G    V  AL+  Y K          S +  ARK+FD+MP +D                 
Sbjct: 180 GFVTSVLNALISSYVKCAASPSAQSSSLMAEARKLFDEMPNRDELSWTTIITGYVKNNDL 239

Query: 175 ---------------VLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPA 219
                          V WN+MISG      + ++  +F  M+ +    LD  +  +V+  
Sbjct: 240 DAAKEFLNGTSKKLGVAWNAMISGYAHRGLYLEAFEMFRKMIMS-KIQLDEFTFTSVISV 298

Query: 220 VAEVQELRLGMEIQCLGLKLGFHD----HVYVLTGLVSFYSKCGEVERAELLFRDIVRPD 275
            A     RLG E+    LK   +      + V   L++FY KCG+V+ A+ +F  +   D
Sbjct: 299 CANAGCFRLGKEMHAYFLKTVANPAPDVAMPVNNALITFYWKCGKVDIAQEIFNKMPERD 358

Query: 276 LISCNAMISGYTCNGKTESSLRLFRQL-----------------LASAERV----NSSTI 314
           L+S N ++SGY      + +   F ++                 +  AE      N   +
Sbjct: 359 LVSWNIILSGYVNVRCMDEAKSFFNEMPEKNILSWIIMISGLAQIGFAEEALKFFNRMKL 418

Query: 315 VGLIPVFYPF----------GHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEA 364
            G  P  Y F          G L     +H+  ++ G  S+ S   AL T+Y+R   ++A
Sbjct: 419 QGFEPCDYAFAGAIISCSVLGSLKHGRQLHAQVVRYGYESSLSAGNALITMYARCGVVDA 478

Query: 365 ARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQ 424
           A  LF         SWNAMIA   Q+G   +AI LF+EM    + P+ ++  +++SAC+ 
Sbjct: 479 AHCLFINMPCVDAISWNAMIAALGQHGQGTQAIELFEEMLKEGILPDRISFLTVISACSH 538

Query: 425 LGAISLG-KWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVT-WN 482
            G +  G K+   +        +      +ID+  + G   EA+E+ + M  +     W 
Sbjct: 539 AGLVKEGRKYFDSMHNVYGVNPDEEHYARIIDLLCRAGKFSEAKEVMESMPFEPGAPIWE 598

Query: 483 TMISGYGLHGH---GLEALQLFSEM--LHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQ 537
            +++G  +HG+   G+EA +   E+   H G        LS +YA   AG   +  ++ +
Sbjct: 599 ALLAGCRIHGNIDLGIEAAERLFELKPQHDGT----YVLLSNMYAV--AGQWNDMAKV-R 651

Query: 538 SMIHDHGFK 546
            ++ D G K
Sbjct: 652 KLMRDRGVK 660



 Score = 46.2 bits (108), Expect = 0.075,   Method: Compositional matrix adjust.
 Identities = 46/176 (26%), Positives = 80/176 (45%), Gaps = 5/176 (2%)

Query: 417 SILSACAQLGAIS--LGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMS 474
           S+L  C     IS  L + VH  + +  F+   ++   LID+Y+K   +  AR LFD + 
Sbjct: 16  SLLQICCLQSPISYSLARPVHAHMIASGFQPRGHILNRLIDIYSKSSKLNYARYLFDEIP 75

Query: 475 HKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDE 534
               V   T+I+ Y   G    + ++FS+    G+R S V + +++ A SH        E
Sbjct: 76  QPDIVARTTLIAAYSAAGDLKLSRKIFSDT-PLGMRDS-VFYNAMITAYSHNHDGHAAIE 133

Query: 535 IFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGA 590
           +F  M  D+ F+P    +  ++  L    + EK  + +    V+ G     ++L A
Sbjct: 134 LFCDMQRDN-FRPDNYTFTSVLGALALVAEKEKHCQQLHCAVVKSGTGFVTSVLNA 188


>gi|15221566|ref|NP_177059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75333633|sp|Q9CAA8.1|PP108_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g68930
 gi|12323213|gb|AAG51585.1|AC011665_6 hypothetical protein [Arabidopsis thaliana]
 gi|332196743|gb|AEE34864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 743

 Score =  426 bits (1096), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 228/674 (33%), Positives = 362/674 (53%), Gaps = 32/674 (4%)

Query: 142 DLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMV 201
           +LF    L+  Y K   +      F+K+P++D V WN +I G   +     ++  +  M+
Sbjct: 71  NLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMM 130

Query: 202 RNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSK---- 257
           R+    L   ++  +L   +    + LG +I    +KLGF  ++ V + L+  Y+     
Sbjct: 131 RDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCI 190

Query: 258 ---------------------------CGEVERAELLFRDIVRPDLISCNAMISGYTCNG 290
                                      CG +E A  LFR + + D +S  AMI G   NG
Sbjct: 191 SDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEK-DSVSWAAMIKGLAQNG 249

Query: 291 KTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLT 350
             + ++  FR++     +++      ++P     G ++    IH+  +++    +  V +
Sbjct: 250 LAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGS 309

Query: 351 ALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAP 410
           AL  +Y +   +  A+ +FD   +K++ SW AM+ GY Q G  EEA+ +F +MQ S + P
Sbjct: 310 ALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDP 369

Query: 411 NPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELF 470
           +  T+   +SACA + ++  G   H    +      + VS +L+ +Y KCG+I ++  LF
Sbjct: 370 DHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLF 429

Query: 471 DLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVR 530
           + M+ +  V+W  M+S Y   G  +E +QLF +M+  G++P GVT   V+ ACS AGLV 
Sbjct: 430 NEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVE 489

Query: 531 EGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGA 590
           +G   F+ M  ++G  P   HY+CM+D+  R+G+LE+A+ FI G+   P    W  LL A
Sbjct: 490 KGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSA 549

Query: 591 CMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAP 650
           C    +  + + A+E L ELDP +   + LLS+IY+++  +   A +R+ ++++ + K P
Sbjct: 550 CRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKKEP 609

Query: 651 GCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKE 710
           G + I+  G  H F++ D+  P    IYA LE+LN K+ + G++ +T    HDVEE  K 
Sbjct: 610 GQSWIKWKGKLHSFSADDESSPYLDQIYAKLEELNNKIIDNGYKPDTSFVHHDVEEAVKV 669

Query: 711 LMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRF 770
            M+  HSE+LAIAFGLI    G  IR+ KNLRVC+DCH ATK IS VTGR I+VRDA RF
Sbjct: 670 KMLNYHSERLAIAFGLIFVPSGQPIRVGKNLRVCVDCHNATKHISSVTGREILVRDAVRF 729

Query: 771 HHFKGGVCSCGDYW 784
           H FK G CSCGD+W
Sbjct: 730 HRFKDGTCSCGDFW 743



 Score =  189 bits (480), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 137/570 (24%), Positives = 263/570 (46%), Gaps = 66/570 (11%)

Query: 18  GAKTQSQLTQ-THAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLF--- 73
           GA+ QS+  +  H  II      +      + H  +  K++ YAR +F  IP+P+LF   
Sbjct: 17  GARNQSRYVKMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWN 76

Query: 74  ----------------------------LFNVIIRGFSNNEMPKSSICFYTHLRKNTALT 105
                                        +NV+I G+S + +  +++  Y  + ++ +  
Sbjct: 77  NLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSAN 136

Query: 106 PDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKV 165
               T   +L  +S+    S+G  +HG  I  G+ S L VG+ L+ +Y     +  A+KV
Sbjct: 137 LTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKV 196

Query: 166 FDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTW------------------ 207
           F  + +++TV++NS++ GL+     +D++ +F  M ++  +W                  
Sbjct: 197 FYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIE 256

Query: 208 -----------LDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYS 256
                      +D     +VLPA   +  +  G +I    ++  F DH+YV + L+  Y 
Sbjct: 257 CFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYC 316

Query: 257 KCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVG 316
           KC  +  A+ +F  + + +++S  AM+ GY   G+ E ++++F  +  S    +  T+  
Sbjct: 317 KCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQ 376

Query: 317 LIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKS 376
            I        L   +  H   + SG++   +V  +L T+Y +  +++ + +LF+E + + 
Sbjct: 377 AISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRD 436

Query: 377 LASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHE 436
             SW AM++ Y Q G   E I LF +M    + P+ VT++ ++SAC++ G +  G+   +
Sbjct: 437 AVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFK 496

Query: 437 LVKSR-NFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSE-VTWNTMISGYGLHGHG 494
           L+ S      +I   + +ID++++ G + EA    + M    + + W T++S     G+ 
Sbjct: 497 LMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGN- 555

Query: 495 LEALQLFSEML--HSGIRPSGVTFLSVLYA 522
           LE  +  +E L       P+G T LS +YA
Sbjct: 556 LEIGKWAAESLIELDPHHPAGYTLLSSIYA 585



 Score = 45.1 bits (105), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 50/211 (23%), Positives = 89/211 (42%), Gaps = 39/211 (18%)

Query: 410 PNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEAREL 469
           P     ++I+ A A + + +  + V + +     + N++    L+  Y+K G I E    
Sbjct: 39  PETFLYNNIVHAYALMKSSTYARRVFDRIP----QPNLFSWNNLLLAYSKAGLISEMEST 94

Query: 470 FDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHS-GIRPSGVTFLSVLYACSHAGL 528
           F+ +  +  VTWN +I GY L G    A++ ++ M+       + VT +++L   S  G 
Sbjct: 95  FEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTMLKLSSSNGH 154

Query: 529 VREGDEIFQSMIHDHGFK-------PLAEHYA---CMVD------------------ILG 560
           V  G +I   +I   GF+       PL   YA   C+ D                  ++G
Sbjct: 155 VSLGKQIHGQVI-KLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMG 213

Query: 561 ---RAGQLEKALEFIKGLAVEPGPAVWGALL 588
                G +E AL+  +G+  E     W A++
Sbjct: 214 GLLACGMIEDALQLFRGM--EKDSVSWAAMI 242


>gi|357116278|ref|XP_003559909.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g48910-like [Brachypodium distachyon]
          Length = 585

 Score =  426 bits (1096), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 217/560 (38%), Positives = 332/560 (59%), Gaps = 42/560 (7%)

Query: 228 LGMEIQCLGLKLGFHD-HVYVLTGLVSFYSK--CGEVERAELLFRDIVRPDLISCNAMIS 284
           LG  +    L+ GF    ++V T LV  Y+K   GE+  A   F +  R D+  CN M++
Sbjct: 65  LGASLHARALRSGFAAADLFVRTALVEMYAKTAAGEIALARAAFDEAPRRDVFLCNVMLA 124

Query: 285 GYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVS 344
            Y   G+   + ++F   ++  + V+ +T+                  IH + ++     
Sbjct: 125 AYVARGEVAEARKVF-DGMSGRDLVSWNTM------------------IHGYAVR----- 160

Query: 345 NSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQ 404
                           ++  AR++FD + ++   SW++MI+ Y +   ++EA+ L++EM+
Sbjct: 161 ---------------GDVGMAREIFDGTRDRDAFSWSSMISAYAKGRCSKEALELWREMR 205

Query: 405 ASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIV 464
            + VAP+ +++ S+LSAC+ +GA+++G  VH  V+S   E ++ + TAL+DMYAKCG+I 
Sbjct: 206 VAGVAPDCISMVSVLSACSAMGALAIGAEVHRFVESNRVEVDMKLGTALVDMYAKCGDIE 265

Query: 465 EARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACS 524
            + ++F  M  K  +TW++MI G   HG G +AL LFSEM+  G++P+ +TF+ VL AC+
Sbjct: 266 NSLKVFHAMPVKDVLTWSSMIIGLANHGLGHDALSLFSEMISQGLQPNEITFIGVLIACT 325

Query: 525 HAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVW 584
           H GLV +G + F SM   HG  P  EHY CMVD+LGRAG +E+A+E I+ +  +P P +W
Sbjct: 326 HVGLVNDGKKYFSSMSDVHGVVPRMEHYGCMVDLLGRAGHVEEAMELIRSMTFKPDPIIW 385

Query: 585 GALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKR 644
             LLGAC IHK+  +A  A  KL  LDP   G++VLLSNIY+    +   A +R+ +++ 
Sbjct: 386 RTLLGACRIHKNVEIAEEAMAKLKVLDPLADGHYVLLSNIYAQANSWEGVAEMRKTIRRE 445

Query: 645 KLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDV 704
            + + PG + IE   T H F SGD+ HP+   IY MLE++  ++R+AG++  T   L D+
Sbjct: 446 NIQRVPGRSSIEWENTVHEFVSGDRSHPRIEEIYKMLEEMMDRLRQAGYRPMTSLVLQDI 505

Query: 705 EEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVV 764
           +E+ K+  +  HSEKLAIAFGL+ T   + +RI KNLR C DCH+A K IS    R ++V
Sbjct: 506 DEQSKKRALAEHSEKLAIAFGLLVTPARSTLRITKNLRACEDCHSAIKLISLAYDRKLIV 565

Query: 765 RDANRFHHFKGGVCSCGDYW 784
           RD NRFHHF  G CSC DYW
Sbjct: 566 RDRNRFHHFSEGQCSCKDYW 585



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 110/484 (22%), Positives = 199/484 (41%), Gaps = 82/484 (16%)

Query: 56  ATCYARALFFSIPKPDLFLFNVIIRGFSNN---EMPKSSICFYTHLRKNTALTPDNFTYS 112
           A+ +ARAL       DLF+   ++  ++     E+  +   F      + A   D F  +
Sbjct: 67  ASLHARALRSGFAAADLFVRTALVEMYAKTAAGEIALARAAF------DEAPRRDVFLCN 120

Query: 113 FVLSAASACCDRSIGVLLHGHAIVSGY-GSDLFVGAALVDLYFKFSWVKSARKVFDKMPE 171
            +L+A  A      G +     +  G  G DL     ++  Y     V  AR++FD   +
Sbjct: 121 VMLAAYVA-----RGEVAEARKVFDGMSGRDLVSWNTMIHGYAVRGDVGMAREIFDGTRD 175

Query: 172 KDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGME 231
           +D   W+SMIS   K  C ++++ ++ +M R  G   D  S+ +VL A + +  L +G E
Sbjct: 176 RDAFSWSSMISAYAKGRCSKEALELWREM-RVAGVAPDCISMVSVLSACSAMGALAIGAE 234

Query: 232 IQC--------LGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMI 283
           +          + +KLG        T LV  Y+KCG++E +  +F  +   D+++ ++MI
Sbjct: 235 VHRFVESNRVEVDMKLG--------TALVDMYAKCGDIENSLKVFHAMPVKDVLTWSSMI 286

Query: 284 SGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIV 343
            G   +G    +L LF ++++   + N  T +G+           L  C H   +  G  
Sbjct: 287 IGLANHGLGHDALSLFSEMISQGLQPNEITFIGV-----------LIACTHVGLVNDG-- 333

Query: 344 SNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEM 403
                 +++S V+  +  ME                +  M+    + G  EEA+ L + M
Sbjct: 334 --KKYFSSMSDVHGVVPRME---------------HYGCMVDLLGRAGHVEEAMELIRSM 376

Query: 404 QASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRN--------FESNIYVSTALID 455
                 P+P+   ++L AC     + + +     +K  +          SNIY      +
Sbjct: 377 T---FKPDPIIWRTLLGACRIHKNVEIAEEAMAKLKVLDPLADGHYVLLSNIYAQANSWE 433

Query: 456 MYAKCGNIVEARELFDLMSHKSEVTW-NTM---ISGYGLHGHGLEALQLFSEML----HS 507
             A+    +  RE    +  +S + W NT+   +SG   H    E  ++  EM+     +
Sbjct: 434 GVAEMRKTIR-RENIQRVPGRSSIEWENTVHEFVSGDRSHPRIEEIYKMLEEMMDRLRQA 492

Query: 508 GIRP 511
           G RP
Sbjct: 493 GYRP 496


>gi|86439692|emb|CAJ19324.1| selenium binding protein [Triticum aestivum]
          Length = 624

 Score =  426 bits (1096), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 218/545 (40%), Positives = 329/545 (60%), Gaps = 3/545 (0%)

Query: 241 FHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFR 300
           F    ++   L+  Y KC  V  A  +F  + R D++S  ++I+GY  N     ++ L  
Sbjct: 82  FAGDAFLDNSLIHMYCKCRSVLDARNVFDQMRRKDMVSWTSLIAGYAQNDMPVEAIGLLP 141

Query: 301 QLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLN 360
            +L    + N  T   L+     +        IH+  +K G   +  V +AL  +Y+R  
Sbjct: 142 GMLKGRFKPNGFTFASLLKAAGAYADSGTGRQIHALAVKCGWHEDVYVGSALLDMYARCG 201

Query: 361 EMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILS 420
           +M+ A  +FD+   K+  SWNA+I+G+ + G  E A+  F EM  +       T SS+ S
Sbjct: 202 KMDMATAVFDKLDSKNGVSWNALISGFARKGDGESALMTFAEMLRNGFEATHFTYSSVFS 261

Query: 421 ACAQLGAISLGKWVH-ELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEV 479
           + A+LGA+  GKWVH  ++KSR  +   +V   L+DMYAK G++++AR++FD + +K  V
Sbjct: 262 SIARLGALEQGKWVHAHVIKSRQ-KLTAFVGNTLLDMYAKSGSMIDARKVFDRVDNKDLV 320

Query: 480 TWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSM 539
           TWN+M++ +  +G G EA+  F EM  SG+  + +TFL +L ACSH GLV+EG   F+ M
Sbjct: 321 TWNSMLTAFAQYGLGKEAVSHFEEMRKSGVYLNQITFLCILTACSHGGLVKEGKRYFE-M 379

Query: 540 IHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNL 599
           + ++  +P  +HY  +V +LGRAG L  AL FI  + +EP  AVWGALL AC +HK+  +
Sbjct: 380 MKEYDLEPEIDHYVTVVALLGRAGLLNYALVFIFKMPMEPTAAVWGALLAACRMHKNAKV 439

Query: 600 ARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGG 659
            + A++ +FELDP++ G  VLL NIY++   +  AA VR ++K   + K P C+ +E+  
Sbjct: 440 GQFAADHVFELDPDDSGPPVLLYNIYASTGQWDAAARVRMMMKTTGVKKEPACSWVEMEN 499

Query: 660 TPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEK 719
           + H+F + D  HPQ+  IY M  +++ K+R+ G+  +    L  V+++EKE  ++ HSEK
Sbjct: 500 SVHMFVANDDTHPQAEEIYKMWGEISKKIRKEGYVPDMDYVLLHVDDQEKEANLQYHSEK 559

Query: 720 LAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCS 779
           LA+AF LI    G  IRI+KN+R+C DCH+A K+ISKV GR IVVRD NRFHHF  G CS
Sbjct: 560 LALAFALIEMPAGATIRIMKNIRICGDCHSAFKYISKVFGREIVVRDTNRFHHFSSGSCS 619

Query: 780 CGDYW 784
           CGDYW
Sbjct: 620 CGDYW 624



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 109/389 (28%), Positives = 190/389 (48%), Gaps = 2/389 (0%)

Query: 104 LTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSAR 163
           L P    Y   ++A +   +      +H H   S +  D F+  +L+ +Y K   V  AR
Sbjct: 47  LAPTPRVYRSFITACAQSKNLEDARKIHAHLGSSRFAGDAFLDNSLIHMYCKCRSVLDAR 106

Query: 164 KVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEV 223
            VFD+M  KD V W S+I+G  +N    ++I +   M++ G    +  + A++L A    
Sbjct: 107 NVFDQMRRKDMVSWTSLIAGYAQNDMPVEAIGLLPGMLK-GRFKPNGFTFASLLKAAGAY 165

Query: 224 QELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMI 283
            +   G +I  L +K G+H+ VYV + L+  Y++CG+++ A  +F  +   + +S NA+I
Sbjct: 166 ADSGTGRQIHALAVKCGWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALI 225

Query: 284 SGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIV 343
           SG+   G  ES+L  F ++L +       T   +       G L     +H+  +KS   
Sbjct: 226 SGFARKGDGESALMTFAEMLRNGFEATHFTYSSVFSSIARLGALEQGKWVHAHVIKSRQK 285

Query: 344 SNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEM 403
             + V   L  +Y++   M  ARK+FD    K L +WN+M+  + Q GL +EA+S F+EM
Sbjct: 286 LTAFVGNTLLDMYAKSGSMIDARKVFDRVDNKDLVTWNSMLTAFAQYGLGKEAVSHFEEM 345

Query: 404 QASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNI 463
           + S V  N +T   IL+AC+  G +  GK   E++K  + E  I     ++ +  + G +
Sbjct: 346 RKSGVYLNQITFLCILTACSHGGLVKEGKRYFEMMKEYDLEPEIDHYVTVVALLGRAGLL 405

Query: 464 VEARE-LFDLMSHKSEVTWNTMISGYGLH 491
             A   +F +    +   W  +++   +H
Sbjct: 406 NYALVFIFKMPMEPTAAVWGALLAACRMH 434



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 67/208 (32%), Positives = 109/208 (52%)

Query: 333 IHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGL 392
           IH+    S    ++ +  +L  +Y +   +  AR +FD+   K + SW ++IAGY QN +
Sbjct: 73  IHAHLGSSRFAGDAFLDNSLIHMYCKCRSVLDARNVFDQMRRKDMVSWTSLIAGYAQNDM 132

Query: 393 TEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTA 452
             EAI L   M   +  PN  T +S+L A         G+ +H L     +  ++YV +A
Sbjct: 133 PVEAIGLLPGMLKGRFKPNGFTFASLLKAAGAYADSGTGRQIHALAVKCGWHEDVYVGSA 192

Query: 453 LIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPS 512
           L+DMYA+CG +  A  +FD +  K+ V+WN +ISG+   G G  AL  F+EML +G   +
Sbjct: 193 LLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGFARKGDGESALMTFAEMLRNGFEAT 252

Query: 513 GVTFLSVLYACSHAGLVREGDEIFQSMI 540
             T+ SV  + +  G + +G  +   +I
Sbjct: 253 HFTYSSVFSSIARLGALEQGKWVHAHVI 280



 Score =  125 bits (315), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 108/465 (23%), Positives = 200/465 (43%), Gaps = 48/465 (10%)

Query: 5   TPQSRNLFLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALF 64
           TP+    F++    +K      + HA +    F  D      L H     ++   AR +F
Sbjct: 50  TPRVYRSFITACAQSKNLEDARKIHAHLGSSRFAGDAFLDNSLIHMYCKCRSVLDARNVF 109

Query: 65  FSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDR 124
             + + D+  +  +I G++ N+MP  +I     + K     P+ FT++ +L AA A  D 
Sbjct: 110 DQMRRKDMVSWTSLIAGYAQNDMPVEAIGLLPGMLKGR-FKPNGFTFASLLKAAGAYADS 168

Query: 125 SIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGL 184
             G  +H  A+  G+  D++VG+AL+D+Y +   +  A  VFDK+  K+ V WN++ISG 
Sbjct: 169 GTGRQIHALAVKCGWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGF 228

Query: 185 MKNCCFQDSIWVFGDMVRNGGTWLDST--SVAAVLPAVAEVQELRLGMEIQCLGLKLGFH 242
            +    + ++  F +M+RNG    ++T  + ++V  ++A +  L  G  +    +K    
Sbjct: 229 ARKGDGESALMTFAEMLRNG---FEATHFTYSSVFSSIARLGALEQGKWVHAHVIKSRQK 285

Query: 243 DHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQL 302
              +V   L+  Y+K G +  A  +F  +   DL++ N+M++ +   G  + ++  F ++
Sbjct: 286 LTAFVGNTLLDMYAKSGSMIDARKVFDRVDNKDLVTWNSMLTAFAQYGLGKEAVSHFEEM 345

Query: 303 LASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEM 362
             S   +N  T + +           LT C H   +K G                R  EM
Sbjct: 346 RKSGVYLNQITFLCI-----------LTACSHGGLVKEG---------------KRYFEM 379

Query: 363 EAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSAC 422
                L     E  +  +  ++A   + GL   A+    +M    + P      ++L+AC
Sbjct: 380 MKEYDL-----EPEIDHYVTVVALLGRAGLLNYALVFIFKM---PMEPTAAVWGALLAAC 431

Query: 423 AQLGAISLGKWVHELVKSRNFES--------NIYVSTALIDMYAK 459
                  +G++  + V   + +         NIY ST   D  A+
Sbjct: 432 RMHKNAKVGQFAADHVFELDPDDSGPPVLLYNIYASTGQWDAAAR 476



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 53/186 (28%), Positives = 95/186 (51%), Gaps = 2/186 (1%)

Query: 403 MQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGN 462
           + A ++AP P    S ++ACAQ   +   + +H  + S  F  + ++  +LI MY KC +
Sbjct: 42  LDAGELAPTPRVYRSFITACAQSKNLEDARKIHAHLGSSRFAGDAFLDNSLIHMYCKCRS 101

Query: 463 IVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYA 522
           +++AR +FD M  K  V+W ++I+GY  +   +EA+ L   ML    +P+G TF S+L A
Sbjct: 102 VLDARNVFDQMRRKDMVSWTSLIAGYAQNDMPVEAIGLLPGMLKGRFKPNGFTFASLLKA 161

Query: 523 CSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPA 582
                    G +I  ++    G+       + ++D+  R G+++ A      L  + G +
Sbjct: 162 AGAYADSGTGRQI-HALAVKCGWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVS 220

Query: 583 VWGALL 588
            W AL+
Sbjct: 221 -WNALI 225


>gi|357502521|ref|XP_003621549.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|87241485|gb|ABD33343.1| Tetratricopeptide-like helical [Medicago truncatula]
 gi|355496564|gb|AES77767.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 654

 Score =  426 bits (1095), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 223/551 (40%), Positives = 323/551 (58%), Gaps = 6/551 (1%)

Query: 240 GFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLF 299
           G     Y+ T L++ Y   G V+ A  +F +     +   NA+        + E  L L+
Sbjct: 104 GLDQDPYLATKLINMYCDLGSVDHACKVFDETREKTIFVWNAIFRALAMASRGEDLLVLY 163

Query: 300 RQL----LASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTV 355
            Q+    + S     +  +   +        L     IH+  L+ G   +  V+T L  V
Sbjct: 164 GQMNWIGIPSNRFTYTYVLKACVVSELSICPLRKGKEIHAHILRHGYEGHVHVMTTLLDV 223

Query: 356 YSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEM--QASKVAPNPV 413
           Y+R   +  A  +F    +K++ SW+AMIA Y +N +  +A+ LFQ M  +A    PNP+
Sbjct: 224 YARFGYVSYASSVFGAMPDKNIVSWSAMIACYAKNEMPMKALELFQIMMLEACDTVPNPI 283

Query: 414 TVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLM 473
           T+ S+L ACA L A+  GK VH  V  R  +S + V   LI MY +CG I   + +FD M
Sbjct: 284 TMVSVLQACASLAALEHGKLVHAYVLRRGLDSTLPVLNTLITMYGRCGEISTGQRVFDYM 343

Query: 474 SHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGD 533
             +  ++WN++IS YG+HG G +A+Q+F  M++ G+ PS +TF++VL ACSHAGLV E  
Sbjct: 344 KKRDVISWNSLISIYGMHGLGKKAIQIFENMINRGVSPSYITFITVLCACSHAGLVEEAK 403

Query: 534 EIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMI 593
            +F+SM++ +   P  EHYACMVDILGRA +L++A+E I+ +  +PGP VWG+LLG+C I
Sbjct: 404 ILFESMLNKYRIHPRMEHYACMVDILGRANRLDEAIELIQNMDFKPGPTVWGSLLGSCRI 463

Query: 594 HKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCT 653
           H +  LA  AS  LFEL+P+N G +VLLS+IY+  R +     VR+ ++ R L K P C+
Sbjct: 464 HCNVELAERASAMLFELEPKNAGNYVLLSHIYAKSRMWNDVRRVRKQLESRGLQKIPSCS 523

Query: 654 LIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMM 713
            IEV    +   S ++ +PQ   + A L  L  +++  G+  +T    +D++EEEKE ++
Sbjct: 524 WIEVKRKIYSLVSIEEYNPQIEELCAFLITLLTEIKNQGYVPQTNVVTYDLDEEEKERIV 583

Query: 714 KVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHF 773
             HS KLA+AFGLI T  G  IRI  NLR+C DCH   KF+SK T R I++RD NRFH F
Sbjct: 584 LGHSGKLAVAFGLINTSKGEIIRISNNLRLCEDCHAFMKFVSKFTNREILLRDVNRFHCF 643

Query: 774 KGGVCSCGDYW 784
           K GVCSCGDYW
Sbjct: 644 KDGVCSCGDYW 654



 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 109/426 (25%), Positives = 203/426 (47%), Gaps = 22/426 (5%)

Query: 83  SNNEMPKSSICFYTHLRKNTAL-----TPDNFTYSFVLSAASACCDRSIGVLLHGHAIVS 137
           +NN+    S+C   +L++   L      P   T+  ++++       S GV +H   + S
Sbjct: 44  NNNDDLIQSLCRGGNLKQAVQLLCCEPNPTKKTFELLINSCIEQNSLSDGVDVHHRLVGS 103

Query: 138 GYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVF 197
           G   D ++   L+++Y     V  A KVFD+  EK   +WN++   L      +D + ++
Sbjct: 104 GLDQDPYLATKLINMYCDLGSVDHACKVFDETREKTIFVWNAIFRALAMASRGEDLLVLY 163

Query: 198 GDMVRNGGTWLDSTS--------VAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLT 249
           G M      W+   S        + A + +   +  LR G EI    L+ G+  HV+V+T
Sbjct: 164 GQM-----NWIGIPSNRFTYTYVLKACVVSELSICPLRKGKEIHAHILRHGYEGHVHVMT 218

Query: 250 GLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFR-QLLASAER 308
            L+  Y++ G V  A  +F  +   +++S +AMI+ Y  N     +L LF+  +L + + 
Sbjct: 219 TLLDVYARFGYVSYASSVFGAMPDKNIVSWSAMIACYAKNEMPMKALELFQIMMLEACDT 278

Query: 309 V-NSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARK 367
           V N  T+V ++        L     +H++ L+ G+ S   VL  L T+Y R  E+   ++
Sbjct: 279 VPNPITMVSVLQACASLAALEHGKLVHAYVLRRGLDSTLPVLNTLITMYGRCGEISTGQR 338

Query: 368 LFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGA 427
           +FD   ++ + SWN++I+ Y  +GL ++AI +F+ M    V+P+ +T  ++L AC+  G 
Sbjct: 339 VFDYMKKRDVISWNSLISIYGMHGLGKKAIQIFENMINRGVSPSYITFITVLCACSHAGL 398

Query: 428 ISLGKWVHE-LVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVT-WNTMI 485
           +   K + E ++        +     ++D+  +   + EA EL   M  K   T W +++
Sbjct: 399 VEEAKILFESMLNKYRIHPRMEHYACMVDILGRANRLDEAIELIQNMDFKPGPTVWGSLL 458

Query: 486 SGYGLH 491
               +H
Sbjct: 459 GSCRIH 464



 Score =  116 bits (290), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 104/424 (24%), Positives = 185/424 (43%), Gaps = 44/424 (10%)

Query: 8   SRNLFLSLLKGAKTQSQLTQ---THAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALF 64
           ++  F  L+     Q+ L+     H +++  G   D    TKL +   D  +  +A  +F
Sbjct: 73  TKKTFELLINSCIEQNSLSDGVDVHHRLVGSGLDQDPYLATKLINMYCDLGSVDHACKVF 132

Query: 65  FSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDN-FTYSFVLSAAS---- 119
               +  +F++N I R  +     +  +  Y  +  N    P N FTY++VL A      
Sbjct: 133 DETREKTIFVWNAIFRALAMASRGEDLLVLYGQM--NWIGIPSNRFTYTYVLKACVVSEL 190

Query: 120 ACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNS 179
           + C    G  +H H +  GY   + V   L+D+Y +F +V  A  VF  MP+K+ V W++
Sbjct: 191 SICPLRKGKEIHAHILRHGYEGHVHVMTTLLDVYARFGYVSYASSVFGAMPDKNIVSWSA 250

Query: 180 MISGLMKNCCFQDSIWVFGDMVRNG-GTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLK 238
           MI+   KN     ++ +F  M+     T  +  ++ +VL A A +  L  G  +    L+
Sbjct: 251 MIACYAKNEMPMKALELFQIMMLEACDTVPNPITMVSVLQACASLAALEHGKLVHAYVLR 310

Query: 239 LGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRL 298
            G    + VL  L++ Y +CGE+   + +F  + + D+IS N++IS Y  +G  + ++++
Sbjct: 311 RGLDSTLPVLNTLITMYGRCGEISTGQRVFDYMKKRDVISWNSLISIYGMHGLGKKAIQI 370

Query: 299 FRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSR 358
           F  ++    R  S + +  I V        L  C H     +G+V  + +L       S 
Sbjct: 371 FENMI---NRGVSPSYITFITV--------LCACSH-----AGLVEEAKILFE-----SM 409

Query: 359 LNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSI 418
           LN+     +         +  +  M+    +    +EAI L Q M      P P    S+
Sbjct: 410 LNKYRIHPR---------MEHYACMVDILGRANRLDEAIELIQNMD---FKPGPTVWGSL 457

Query: 419 LSAC 422
           L +C
Sbjct: 458 LGSC 461



 Score = 69.3 bits (168), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 53/200 (26%), Positives = 94/200 (47%), Gaps = 9/200 (4%)

Query: 398 SLFQEMQASKVAPNPV--TVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALID 455
           +L Q +Q     PNP   T   ++++C +  ++S G  VH  +     + + Y++T LI+
Sbjct: 58  NLKQAVQLLCCEPNPTKKTFELLINSCIEQNSLSDGVDVHHRLVGSGLDQDPYLATKLIN 117

Query: 456 MYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVT 515
           MY   G++  A ++FD    K+   WN +     +   G + L L+ +M   GI  +  T
Sbjct: 118 MYCDLGSVDHACKVFDETREKTIFVWNAIFRALAMASRGEDLLVLYGQMNWIGIPSNRFT 177

Query: 516 FLSVLYACSHAGL----VREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEF 571
           +  VL AC  + L    +R+G EI  + I  HG++        ++D+  R G +  A   
Sbjct: 178 YTYVLKACVVSELSICPLRKGKEI-HAHILRHGYEGHVHVMTTLLDVYARFGYVSYA-SS 235

Query: 572 IKGLAVEPGPAVWGALLGAC 591
           + G   +     W A++ AC
Sbjct: 236 VFGAMPDKNIVSWSAMI-AC 254


>gi|326519098|dbj|BAJ96548.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 624

 Score =  426 bits (1095), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 217/545 (39%), Positives = 328/545 (60%), Gaps = 3/545 (0%)

Query: 241 FHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFR 300
           F    ++   L+  Y KCG V  A  +F ++ R D++S  ++I+GY  N   E ++ L  
Sbjct: 82  FAGDAFLDNSLIHLYCKCGSVLEARKVFDEMRRKDMVSWTSLIAGYAQNDMPEEAIGLLP 141

Query: 301 QLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLN 360
            +L    + N  T   L+          +   IH+  +K     +  V +AL  +Y+R  
Sbjct: 142 GMLKGRFKPNGFTFASLLKAAGAHADSGIGRQIHALAVKCDWHEDVYVGSALLDMYARCG 201

Query: 361 EMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILS 420
            M+ A  +FD+   K+  SWNA+I+G+ + G  E A+  F EM  +       T SS+ S
Sbjct: 202 MMDMATAVFDKLDSKNGVSWNALISGFARKGDGETALMTFAEMLRNGFEATHFTYSSVFS 261

Query: 421 ACAQLGAISLGKWVH-ELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEV 479
           + A+LGA+  GKWVH  ++KSR  +   +    L+DMYAK G++++AR++FD +  K  V
Sbjct: 262 SIARLGALEQGKWVHAHMIKSRQ-KMTAFAGNTLLDMYAKSGSMIDARKVFDRVDDKDLV 320

Query: 480 TWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSM 539
           TWNTM++ +  +G G EA+  F EM  SGI  + VTFL +L ACSH GLV+EG   F+ M
Sbjct: 321 TWNTMLTAFAQYGLGKEAVSHFEEMRKSGIYLNQVTFLCILTACSHGGLVKEGKRYFE-M 379

Query: 540 IHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNL 599
           + ++  +P  +H+  +V +LGRAG L  AL FI  + +EP  AVWGALL AC +HK+  +
Sbjct: 380 MKEYDLEPEIDHFVTVVALLGRAGLLNFALVFIFKMPIEPTAAVWGALLAACRMHKNAKV 439

Query: 600 ARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGG 659
            + A++ +FELDP++ G  VLL NIY++   +  AA VR+++K   + K P C+ +E+  
Sbjct: 440 GQFAADHVFELDPDDSGPPVLLYNIYASTGQWDAAARVRRIMKTTGVKKEPACSWVEMEN 499

Query: 660 TPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEK 719
           + H+F + D  HP++  IY M  +++ K+R+ G+  +    L  V+++E+E  ++ HSEK
Sbjct: 500 SVHMFVANDDTHPRAEEIYKMWGQISKKIRKEGYVPDMDYVLLRVDDQEREANLQYHSEK 559

Query: 720 LAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCS 779
           LA+AF LI    G  IRI+KN+R+C DCH+A K+ISKV GR IVVRD NRFHHF  G CS
Sbjct: 560 LALAFALIEMPAGATIRIMKNIRICGDCHSAFKYISKVFGREIVVRDTNRFHHFSNGSCS 619

Query: 780 CGDYW 784
           C DYW
Sbjct: 620 CADYW 624



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 108/389 (27%), Positives = 190/389 (48%), Gaps = 2/389 (0%)

Query: 104 LTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSAR 163
           L P    Y   ++A +   +      +H H   S +  D F+  +L+ LY K   V  AR
Sbjct: 47  LAPTPRVYHTFITACAQSKNLEDARKVHAHLASSRFAGDAFLDNSLIHLYCKCGSVLEAR 106

Query: 164 KVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEV 223
           KVFD+M  KD V W S+I+G  +N   +++I +   M++ G    +  + A++L A    
Sbjct: 107 KVFDEMRRKDMVSWTSLIAGYAQNDMPEEAIGLLPGMLK-GRFKPNGFTFASLLKAAGAH 165

Query: 224 QELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMI 283
            +  +G +I  L +K  +H+ VYV + L+  Y++CG ++ A  +F  +   + +S NA+I
Sbjct: 166 ADSGIGRQIHALAVKCDWHEDVYVGSALLDMYARCGMMDMATAVFDKLDSKNGVSWNALI 225

Query: 284 SGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIV 343
           SG+   G  E++L  F ++L +       T   +       G L     +H+  +KS   
Sbjct: 226 SGFARKGDGETALMTFAEMLRNGFEATHFTYSSVFSSIARLGALEQGKWVHAHMIKSRQK 285

Query: 344 SNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEM 403
             +     L  +Y++   M  ARK+FD   +K L +WN M+  + Q GL +EA+S F+EM
Sbjct: 286 MTAFAGNTLLDMYAKSGSMIDARKVFDRVDDKDLVTWNTMLTAFAQYGLGKEAVSHFEEM 345

Query: 404 QASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNI 463
           + S +  N VT   IL+AC+  G +  GK   E++K  + E  I     ++ +  + G +
Sbjct: 346 RKSGIYLNQVTFLCILTACSHGGLVKEGKRYFEMMKEYDLEPEIDHFVTVVALLGRAGLL 405

Query: 464 VEARE-LFDLMSHKSEVTWNTMISGYGLH 491
             A   +F +    +   W  +++   +H
Sbjct: 406 NFALVFIFKMPIEPTAAVWGALLAACRMH 434



 Score =  139 bits (349), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 70/208 (33%), Positives = 113/208 (54%)

Query: 333 IHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGL 392
           +H+    S    ++ +  +L  +Y +   +  ARK+FDE   K + SW ++IAGY QN +
Sbjct: 73  VHAHLASSRFAGDAFLDNSLIHLYCKCGSVLEARKVFDEMRRKDMVSWTSLIAGYAQNDM 132

Query: 393 TEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTA 452
            EEAI L   M   +  PN  T +S+L A        +G+ +H L    ++  ++YV +A
Sbjct: 133 PEEAIGLLPGMLKGRFKPNGFTFASLLKAAGAHADSGIGRQIHALAVKCDWHEDVYVGSA 192

Query: 453 LIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPS 512
           L+DMYA+CG +  A  +FD +  K+ V+WN +ISG+   G G  AL  F+EML +G   +
Sbjct: 193 LLDMYARCGMMDMATAVFDKLDSKNGVSWNALISGFARKGDGETALMTFAEMLRNGFEAT 252

Query: 513 GVTFLSVLYACSHAGLVREGDEIFQSMI 540
             T+ SV  + +  G + +G  +   MI
Sbjct: 253 HFTYSSVFSSIARLGALEQGKWVHAHMI 280



 Score =  125 bits (315), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 108/471 (22%), Positives = 202/471 (42%), Gaps = 48/471 (10%)

Query: 5   TPQSRNLFLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALF 64
           TP+  + F++    +K      + HA +    F  D      L H      +   AR +F
Sbjct: 50  TPRVYHTFITACAQSKNLEDARKVHAHLASSRFAGDAFLDNSLIHLYCKCGSVLEARKVF 109

Query: 65  FSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDR 124
             + + D+  +  +I G++ N+MP+ +I     + K     P+ FT++ +L AA A  D 
Sbjct: 110 DEMRRKDMVSWTSLIAGYAQNDMPEEAIGLLPGMLKGR-FKPNGFTFASLLKAAGAHADS 168

Query: 125 SIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGL 184
            IG  +H  A+   +  D++VG+AL+D+Y +   +  A  VFDK+  K+ V WN++ISG 
Sbjct: 169 GIGRQIHALAVKCDWHEDVYVGSALLDMYARCGMMDMATAVFDKLDSKNGVSWNALISGF 228

Query: 185 MKNCCFQDSIWVFGDMVRNGGTWLDST--SVAAVLPAVAEVQELRLGMEIQCLGLKLGFH 242
            +    + ++  F +M+RNG    ++T  + ++V  ++A +  L  G  +    +K    
Sbjct: 229 ARKGDGETALMTFAEMLRNG---FEATHFTYSSVFSSIARLGALEQGKWVHAHMIKSRQK 285

Query: 243 DHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQL 302
              +    L+  Y+K G +  A  +F  +   DL++ N M++ +   G  + ++  F ++
Sbjct: 286 MTAFAGNTLLDMYAKSGSMIDARKVFDRVDDKDLVTWNTMLTAFAQYGLGKEAVSHFEEM 345

Query: 303 LASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEM 362
             S   +N  T + +           LT C H   +K G                R  EM
Sbjct: 346 RKSGIYLNQVTFLCI-----------LTACSHGGLVKEG---------------KRYFEM 379

Query: 363 EAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSAC 422
                L     E  +  +  ++A   + GL   A+    +M    + P      ++L+AC
Sbjct: 380 MKEYDL-----EPEIDHFVTVVALLGRAGLLNFALVFIFKM---PIEPTAAVWGALLAAC 431

Query: 423 AQLGAISLGKWVHELVKSRNFES--------NIYVSTALIDMYAKCGNIVE 465
                  +G++  + V   + +         NIY ST   D  A+   I++
Sbjct: 432 RMHKNAKVGQFAADHVFELDPDDSGPPVLLYNIYASTGQWDAAARVRRIMK 482



 Score = 89.7 bits (221), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 44/125 (35%), Positives = 73/125 (58%), Gaps = 1/125 (0%)

Query: 403 MQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGN 462
           + A ++AP P    + ++ACAQ   +   + VH  + S  F  + ++  +LI +Y KCG+
Sbjct: 42  LDAGELAPTPRVYHTFITACAQSKNLEDARKVHAHLASSRFAGDAFLDNSLIHLYCKCGS 101

Query: 463 IVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYA 522
           ++EAR++FD M  K  V+W ++I+GY  +    EA+ L   ML    +P+G TF S+L A
Sbjct: 102 VLEARKVFDEMRRKDMVSWTSLIAGYAQNDMPEEAIGLLPGMLKGRFKPNGFTFASLLKA 161

Query: 523 C-SHA 526
             +HA
Sbjct: 162 AGAHA 166


>gi|218195439|gb|EEC77866.1| hypothetical protein OsI_17132 [Oryza sativa Indica Group]
          Length = 865

 Score =  426 bits (1095), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 260/791 (32%), Positives = 401/791 (50%), Gaps = 81/791 (10%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           A  LF  +P+ D+  +N ++ G+         +  +  + ++    P+ FT+  V+ +  
Sbjct: 90  AEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETFVSMHRSGDSLPNAFTFCCVMKSCG 149

Query: 120 ACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVF------------- 166
           A   R +   L G      +  D  V  ALVD++ +  +V  A ++F             
Sbjct: 150 ALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIERPTIFCRNS 209

Query: 167 ------------------DKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWL 208
                             + M E+D V WN MI+ L ++   ++++ +  +M R G   L
Sbjct: 210 MLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKG-VRL 268

Query: 209 DSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLF 268
           DST+  + L A A +  L  G ++    ++       YV + L+  Y+KCG  + A+ +F
Sbjct: 269 DSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVF 328

Query: 269 RDIVRPDLISCNAMISG---YTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFG 325
             +   + +S   +I G   Y C  K   S+ LF Q+ A    ++   +  LI   +   
Sbjct: 329 NSLQDRNSVSWTVLIGGSLQYECFSK---SVELFNQMRAELMAIDQFALATLISGCFNRM 385

Query: 326 HLHLTNCIHSFCLKSG-----IVSNSSV--------------------------LTALST 354
            L L   +HS CLKSG     +VSNS +                           T++ T
Sbjct: 386 DLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMIT 445

Query: 355 VYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASK-VAPNPV 413
            YS++  +  AR+ FD    ++  +WNAM+  Y Q+G  E+ + ++  M + K V P+ V
Sbjct: 446 AYSQIGNIIKAREFFDGMDTRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWV 505

Query: 414 TVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLM 473
           T  ++   CA +GA  LG  +           N+ V+ A I MY+KCG I EA++LFDL+
Sbjct: 506 TYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKLFDLL 565

Query: 474 SHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGD 533
           + K  V+WN MI+GY  HG G +A + F +ML  G +P  +++++VL  CSH+GLV+EG 
Sbjct: 566 NGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQEGK 625

Query: 534 EIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMI 593
             F  M   HG  P  EH++CMVD+LGRAG L +A + I  + ++P   VWGALL AC I
Sbjct: 626 LYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGALLSACKI 685

Query: 594 HKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCT 653
           H +  LA +A++ +FELD  + G ++LL+ IYS       +A VR++++ + + K PG +
Sbjct: 686 HGNDELAELAAKHVFELDSPDSGSYMLLAKIYSDAGKSDDSAQVRKLMRDKGIKKNPGYS 745

Query: 654 LIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMM 713
            +EV    HVF + D  HPQ  AI   L++L  K+   G+           E    E+  
Sbjct: 746 WMEVENKVHVFKADDVSHPQVIAIRNKLDELMEKIAHLGYVR--------TESPRSEIH- 796

Query: 714 KVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHF 773
             HSEKLA+AFG+++      I I+KNLR+C DCHT  K IS VT R  V+RD  RFHHF
Sbjct: 797 --HSEKLAVAFGIMSLPAWMPIHIMKNLRICGDCHTVIKLISSVTDREFVIRDGVRFHHF 854

Query: 774 KGGVCSCGDYW 784
           K G CSCGDYW
Sbjct: 855 KSGSCSCGDYW 865



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 145/657 (22%), Positives = 273/657 (41%), Gaps = 101/657 (15%)

Query: 149 LVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWL 208
           +++ Y K   +  A ++FD+MP +D   WN+++SG  +   F D +  F  M R+G +  
Sbjct: 77  MMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETFVSMHRSGDSLP 136

Query: 209 DSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLF 268
           ++ +   V+ +   +    L  ++  L  K  F     V T LV  + +CG V+ A  LF
Sbjct: 137 NAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLF 196

Query: 269 RDIVRP-------------------------------DLISCNAMISGYTCNGKTESSLR 297
             I RP                               D++S N MI+  + +G+   +L 
Sbjct: 197 SQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALG 256

Query: 298 LFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYS 357
           L  ++     R++S+T    +        L     +H+  ++S    +  V +AL  +Y+
Sbjct: 257 LVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYA 316

Query: 358 RLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSS 417
           +    + A+++F+   +++  SW  +I G  Q     +++ LF +M+A  +A +   +++
Sbjct: 317 KCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALAT 376

Query: 418 ILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKC----------------- 460
           ++S C     + LG+ +H L         I VS +LI +YAKC                 
Sbjct: 377 LISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERD 436

Query: 461 --------------GNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEML- 505
                         GNI++ARE FD M  ++ +TWN M+  Y  HG   + L+++S ML 
Sbjct: 437 IVSWTSMITAYSQIGNIIKAREFFDGMDTRNAITWNAMLGAYIQHGAEEDGLKMYSAMLS 496

Query: 506 HSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKP-------LAEHYACMVDI 558
              + P  VT++++   C+  G  + GD+I       H  K        +A     M   
Sbjct: 497 QKDVTPDWVTYVTLFRGCADIGANKLGDQII-----GHTVKAGLILNVSVANAAITMYSK 551

Query: 559 LGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFEL-----DPE 613
            GR  + +K  + + G  V      W A++     H    + + A++   ++      P+
Sbjct: 552 CGRISEAQKLFDLLNGKDV----VSWNAMITGYSQH---GMGKQAAKTFDDMLSKGAKPD 604

Query: 614 NVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPG-----CTLIEVGGTPHVFTSGD 668
            + Y  +LS    +    +Q   +   +  R    +PG     C +  +G   H+  + D
Sbjct: 605 YISYVAVLSGC--SHSGLVQEGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKD 662

Query: 669 -----QLHPQSTAIYAMLE--KLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSE 718
                 + P +    A+L   K++G    A    + V  L   +     L+ K++S+
Sbjct: 663 LIDKMPMKPTAEVWGALLSACKIHGNDELAELAAKHVFELDSPDSGSYMLLAKIYSD 719



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 58/262 (22%), Positives = 111/262 (42%), Gaps = 11/262 (4%)

Query: 38  QNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTH 97
           + D+ + T +    S       AR  F  +   +   +N ++  +  +   +  +  Y+ 
Sbjct: 434 ERDIVSWTSMITAYSQIGNIIKAREFFDGMDTRNAITWNAMLGAYIQHGAEEDGLKMYSA 493

Query: 98  LRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFS 157
           +     +TPD  TY  +    +      +G  + GH + +G   ++ V  A + +Y K  
Sbjct: 494 MLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCG 553

Query: 158 WVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVL 217
            +  A+K+FD +  KD V WN+MI+G  ++   + +   F DM+  G    D  S  AVL
Sbjct: 554 RISEAQKLFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAK-PDYISYVAVL 612

Query: 218 PAVAE---VQELRL--GMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEV-ERAELLFRDI 271
              +    VQE +L   M  +  G+  G        + +V    + G + E  +L+ +  
Sbjct: 613 SGCSHSGLVQEGKLYFDMMTRVHGISPGLEH----FSCMVDLLGRAGHLTEAKDLIDKMP 668

Query: 272 VRPDLISCNAMISGYTCNGKTE 293
           ++P      A++S    +G  E
Sbjct: 669 MKPTAEVWGALLSACKIHGNDE 690



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 44/154 (28%), Positives = 74/154 (48%), Gaps = 5/154 (3%)

Query: 416 SSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSH 475
           +++L A    GA+S  +    L+++   E N+     +++ YAK G++ +A ELFD M  
Sbjct: 43  NTLLHAYFSCGALSDAR---RLLRADIKEPNVITHNIMMNGYAKQGSLSDAEELFDRMPR 99

Query: 476 KSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIR-PSGVTFLSVLYACSHAGLVREGDE 534
           +   +WNT++SGY      L+ L+ F  M  SG   P+  TF  V+ +C   G  RE   
Sbjct: 100 RDVASWNTLMSGYFQARRFLDGLETFVSMHRSGDSLPNAFTFCCVMKSCGALG-CRELAP 158

Query: 535 IFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKA 568
               +     F    +    +VD+  R G ++ A
Sbjct: 159 QLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFA 192


>gi|255543413|ref|XP_002512769.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223547780|gb|EEF49272.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 684

 Score =  426 bits (1095), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 234/662 (35%), Positives = 378/662 (57%), Gaps = 40/662 (6%)

Query: 159 VKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMV-RNGGTWLDSTSVAAVL 217
           +K A  +FDK+PE D   W  +ISG  ++   + +I ++  ++ RN     D   + +V 
Sbjct: 27  LKRALYLFDKIPEPDLRTWTILISGHTQHGFPKKAIDIYSTLLSRN--VRPDKFVLLSVA 84

Query: 218 PAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLI 277
            A A   +L +  +I    ++ GF+  + +   L+  + KC  V  A  +F D+V  D++
Sbjct: 85  KACAASGDLVVAKKIHDDAIQFGFNKDLVLGNALIDMFGKCKFVNGARCVFDDMVVKDVV 144

Query: 278 SCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFC 337
           S  +M   Y   G     + LFR++  +  R NS T+  ++P    +  + L   +H F 
Sbjct: 145 SWTSMTYCYVNCGMCRQGILLFREMGLNGIRANSLTVSSILPACADY--IKLGREVHGFI 202

Query: 338 LKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSL-------------------- 377
           L++ +  N  V +AL  +Y+    ++ AR +FD    + +                    
Sbjct: 203 LRNEMEGNVYVSSALVNMYASSLGLKQARLVFDSMYHRDIVSWNVMLTAYFLNKEYERGL 262

Query: 378 ---------------ASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSAC 422
                          ASWNA I+G  QNG  E A+ +  +MQ S + PN +T+ S L  C
Sbjct: 263 GLFHQMRKEGIKLNQASWNAAISGCMQNGQHELALGILCKMQDSGIKPNRITIVSALPGC 322

Query: 423 AQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWN 482
             L ++  GK +H  V    F  ++ ++TAL+ +YAKCG++  +R +F+ M  K  V WN
Sbjct: 323 TNLESLRGGKEIHGYVFRHWFIEDVTITTALVLLYAKCGDLELSRHVFNTMPRKDVVAWN 382

Query: 483 TMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHD 542
           TMI    +HG G E+L LF++ML SG+ P+ VTF+ VL  CSH+ L  EG  +F SM  +
Sbjct: 383 TMIMANSMHGKGGESLILFNKMLDSGVEPNSVTFIGVLSGCSHSQLADEGLLVFNSMSSE 442

Query: 543 HGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARV 602
           H   P A+HY+CMVD+L RAG+LE+A +FI+ + +EP  A WGALLGAC ++K+  L  +
Sbjct: 443 HSITPDADHYSCMVDVLSRAGRLEEAYDFIRKMPIEPTAAAWGALLGACRVYKNVELGTL 502

Query: 603 ASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPH 662
           A+ +LFE++P+N G +VLLSNI    + +++A+ +R++++ + LAK PG + ++V    +
Sbjct: 503 AASQLFEIEPDNAGNYVLLSNILVTAKKWVEASEIRKMMRDKGLAKTPGRSWVQVKNKVY 562

Query: 663 VFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAI 722
            F +GD+ + Q   IY  L++++ KMR  G+Q  T   L +V++E++E  +  HSE+LA+
Sbjct: 563 SFVTGDKSNEQKDMIYRFLDEIDEKMRLDGYQPNTDFVLQNVDQEQREETLCSHSERLAV 622

Query: 723 AFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGD 782
           AFG++ +   T +R+ KNLR+C DCH A K I+K+ G  I+VRD+ RFHHF+ G C+C D
Sbjct: 623 AFGILNSSGKTTVRVFKNLRICGDCHNAIKLIAKIVGMQIIVRDSLRFHHFRDGYCTCND 682

Query: 783 YW 784
           +W
Sbjct: 683 FW 684



 Score =  173 bits (438), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 126/459 (27%), Positives = 213/459 (46%), Gaps = 47/459 (10%)

Query: 53  DFKATCYARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYS 112
           D K   Y   LF  IP+PDL  + ++I G + +  PK +I  Y+ L     + PD F   
Sbjct: 26  DLKRALY---LFDKIPEPDLRTWTILISGHTQHGFPKKAIDIYSTLLSRN-VRPDKFVLL 81

Query: 113 FVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEK 172
            V  A +A  D  +   +H  AI  G+  DL +G AL+D++ K  +V  AR VFD M  K
Sbjct: 82  SVAKACAASGDLVVAKKIHDDAIQFGFNKDLVLGNALIDMFGKCKFVNGARCVFDDMVVK 141

Query: 173 DTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEI 232
           D V W SM    +     +  I +F +M  N G   +S +V+++LPA A+   ++LG E+
Sbjct: 142 DVVSWTSMTYCYVNCGMCRQGILLFREMGLN-GIRANSLTVSSILPACADY--IKLGREV 198

Query: 233 QCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKT 292
               L+     +VYV + LV+ Y+    +++A L+F  +   D++S N M++ Y  N + 
Sbjct: 199 HGFILRNEMEGNVYVSSALVNMYASSLGLKQARLVFDSMYHRDIVSWNVMLTAYFLNKEY 258

Query: 293 ESSLRLFRQLLASAERVNSS-----------------------------------TIVGL 317
           E  L LF Q+     ++N +                                   TIV  
Sbjct: 259 ERGLGLFHQMRKEGIKLNQASWNAAISGCMQNGQHELALGILCKMQDSGIKPNRITIVSA 318

Query: 318 IPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSL 377
           +P       L     IH +  +   + + ++ TAL  +Y++  ++E +R +F+    K +
Sbjct: 319 LPGCTNLESLRGGKEIHGYVFRHWFIEDVTITTALVLLYAKCGDLELSRHVFNTMPRKDV 378

Query: 378 ASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHEL 437
            +WN MI   + +G   E++ LF +M  S V PN VT   +LS C+       G  V   
Sbjct: 379 VAWNTMIMANSMHGKGGESLILFNKMLDSGVEPNSVTFIGVLSGCSHSQLADEGLLVFNS 438

Query: 438 VKSRNF---ESNIYVSTALIDMYAKCGNIVEARELFDLM 473
           + S +    +++ Y  + ++D+ ++ G + EA +    M
Sbjct: 439 MSSEHSITPDADHY--SCMVDVLSRAGRLEEAYDFIRKM 475



 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 90/289 (31%), Positives = 147/289 (50%), Gaps = 3/289 (1%)

Query: 259 GEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLI 318
           G+++RA  LF  I  PDL +   +ISG+T +G  + ++ ++  LL+   R +   ++ + 
Sbjct: 25  GDLKRALYLFDKIPEPDLRTWTILISGHTQHGFPKKAIDIYSTLLSRNVRPDKFVLLSVA 84

Query: 319 PVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLA 378
                 G L +   IH   ++ G   +  +  AL  ++ +   +  AR +FD+   K + 
Sbjct: 85  KACAASGDLVVAKKIHDDAIQFGFNKDLVLGNALIDMFGKCKFVNGARCVFDDMVVKDVV 144

Query: 379 SWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELV 438
           SW +M   Y   G+  + I LF+EM  + +  N +TVSSIL ACA    I LG+ VH  +
Sbjct: 145 SWTSMTYCYVNCGMCRQGILLFREMGLNGIRANSLTVSSILPACADY--IKLGREVHGFI 202

Query: 439 KSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEAL 498
                E N+YVS+AL++MYA    + +AR +FD M H+  V+WN M++ Y L+      L
Sbjct: 203 LRNEMEGNVYVSSALVNMYASSLGLKQARLVFDSMYHRDIVSWNVMLTAYFLNKEYERGL 262

Query: 499 QLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKP 547
            LF +M   GI+ +  ++ + +  C   G       I   M  D G KP
Sbjct: 263 GLFHQMRKEGIKLNQASWNAAISGCMQNGQHELALGILCKM-QDSGIKP 310



 Score =  105 bits (262), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 122/519 (23%), Positives = 209/519 (40%), Gaps = 86/519 (16%)

Query: 1   MSMKTPQSRNLFLSLLKGAKTQSQLT---QTHAQIIIHGFQNDLSTVTKLAHRLSDFKAT 57
           +S      + + LS+ K       L    + H   I  GF  DL     L       K  
Sbjct: 69  LSRNVRPDKFVLLSVAKACAASGDLVVAKKIHDDAIQFGFNKDLVLGNALIDMFGKCKFV 128

Query: 58  CYARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSA 117
             AR +F  +   D+  +  +   + N  M +  I  +  +  N  +  ++ T S +L A
Sbjct: 129 NGARCVFDDMVVKDVVSWTSMTYCYVNCGMCRQGILLFREMGLN-GIRANSLTVSSILPA 187

Query: 118 ASACCDR-SIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVL 176
              C D   +G  +HG  + +    +++V +ALV++Y     +K AR VFD M  +D V 
Sbjct: 188 ---CADYIKLGREVHGFILRNEMEGNVYVSSALVNMYASSLGLKQARLVFDSMYHRDIVS 244

Query: 177 WNSMISGLMKNCCFQDSIWVFGDMVRNG-------------------------------- 204
           WN M++    N  ++  + +F  M + G                                
Sbjct: 245 WNVMLTAYFLNKEYERGLGLFHQMRKEGIKLNQASWNAAISGCMQNGQHELALGILCKMQ 304

Query: 205 --GTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVE 262
             G   +  ++ + LP    ++ LR G EI     +  F + V + T LV  Y+KCG++E
Sbjct: 305 DSGIKPNRITIVSALPGCTNLESLRGGKEIHGYVFRHWFIEDVTITTALVLLYAKCGDLE 364

Query: 263 RAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFY 322
            +  +F  + R D+++ N MI   + +GK   SL LF ++L S    NS T +G+     
Sbjct: 365 LSRHVFNTMPRKDVVAWNTMIMANSMHGKGGESLILFNKMLDSGVEPNSVTFIGV----- 419

Query: 323 PFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNA 382
                 L+ C HS     G++    V  ++S+ +S   + +                ++ 
Sbjct: 420 ------LSGCSHSQLADEGLL----VFNSMSSEHSITPDAD---------------HYSC 454

Query: 383 MIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRN 442
           M+   ++ G  EEA    ++M    + P      ++L AC     + LG     L  S+ 
Sbjct: 455 MVDVLSRAGRLEEAYDFIRKM---PIEPTAAAWGALLGACRVYKNVELGT----LAASQL 507

Query: 443 FE-----SNIYVSTALIDMYAKCGNIVEARELFDLMSHK 476
           FE     +  YV  + I + AK    VEA E+  +M  K
Sbjct: 508 FEIEPDNAGNYVLLSNILVTAK--KWVEASEIRKMMRDK 544


>gi|357481283|ref|XP_003610927.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355512262|gb|AES93885.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 802

 Score =  426 bits (1095), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 228/608 (37%), Positives = 341/608 (56%), Gaps = 36/608 (5%)

Query: 208 LDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELL 267
           L ST +AA L      ++L LG  +        F   + +   L+  Y+KCG +  A++L
Sbjct: 65  LYSTLIAACL----RHRKLELGKRVHAHTKASNFIPGIVISNRLIHMYAKCGSLVDAQML 120

Query: 268 FRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHL 327
           F +I + DL S N MISGY   G+ E + +LF ++        ++ I G +   +    L
Sbjct: 121 FDEIPQKDLCSWNTMISGYANVGRIEQARKLFDEMPHRDNFSWNAVISGYVSQGWYMEAL 180

Query: 328 HL---------TNC-----------------------IHSFCLKSGIVSNSSVLTALSTV 355
            L         +NC                       IH + ++SG+  +  V TAL  +
Sbjct: 181 DLFRMMQENESSNCNMFTLSSALAAAAAISSLRRGKEIHGYLIRSGLELDEVVWTALLDL 240

Query: 356 YSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTV 415
           Y +   +  AR +FD+ ++K + SW  MI    ++G  +E  SLF+++  S V PN  T 
Sbjct: 241 YGKCGSLNEARGIFDQMADKDIVSWTTMIHRCFEDGRKKEGFSLFRDLMGSGVRPNEYTF 300

Query: 416 SSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSH 475
           + +L+ACA L A  +GK VH  +    ++   + ++AL+ +Y+KCGN   AR +F+ M  
Sbjct: 301 AGVLNACADLAAEQMGKEVHGYMTRVGYDPFSFAASALVHVYSKCGNTETARRVFNQMPR 360

Query: 476 KSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEI 535
              V+W ++I GY  +G    ALQ F  +L SG +P  +TF+ VL AC+HAGLV  G E 
Sbjct: 361 PDLVSWTSLIVGYAQNGQPDMALQFFESLLRSGTKPDEITFVGVLSACTHAGLVDIGLEY 420

Query: 536 FQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHK 595
           F S+   HG    A+HYAC++D+L R+G+ ++A   I  + ++P   +W +LLG C IH 
Sbjct: 421 FHSVKEKHGLVHTADHYACVIDLLARSGRFKEAENIIDNMPMKPDKFLWASLLGGCRIHG 480

Query: 596 DTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLI 655
           +  LA  A++ LFEL+PEN   ++ LSNIY+    + +   VR  +  R + K PG + I
Sbjct: 481 NIELAERAAKALFELEPENPATYITLSNIYANAGLWTEETKVRNDMDNRGIVKKPGKSWI 540

Query: 656 EVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKV 715
           E+    HVF  GD  HP+ + I+  L +L+ KM+E G+  +T   LHDVEEE+KE  +  
Sbjct: 541 EIKRQVHVFLVGDTSHPKISDIHEYLGELSKKMKEEGYVADTNFVLHDVEEEQKEQNIFY 600

Query: 716 HSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKG 775
           HSEKLA+AFG+I+T PGT I++ KNLR C+DCH A K+ISK+  R I+VRD+NRFH F  
Sbjct: 601 HSEKLAVAFGIISTSPGTPIKVFKNLRTCVDCHNAMKYISKIVQRKIIVRDSNRFHCFVD 660

Query: 776 GVCSCGDY 783
           G CSC DY
Sbjct: 661 GSCSCKDY 668



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 105/400 (26%), Positives = 189/400 (47%), Gaps = 3/400 (0%)

Query: 142 DLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMV 201
           DL     ++  Y     ++ ARK+FD+MP +D   WN++ISG +    + +++ +F  M 
Sbjct: 128 DLCSWNTMISGYANVGRIEQARKLFDEMPHRDNFSWNAVISGYVSQGWYMEALDLFRMMQ 187

Query: 202 RNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEV 261
            N  +  +  ++++ L A A +  LR G EI    ++ G      V T L+  Y KCG +
Sbjct: 188 ENESSNCNMFTLSSALAAAAAISSLRRGKEIHGYLIRSGLELDEVVWTALLDLYGKCGSL 247

Query: 262 ERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVF 321
             A  +F  +   D++S   MI     +G+ +    LFR L+ S  R N  T  G++   
Sbjct: 248 NEARGIFDQMADKDIVSWTTMIHRCFEDGRKKEGFSLFRDLMGSGVRPNEYTFAGVLNAC 307

Query: 322 YPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWN 381
                  +   +H +  + G    S   +AL  VYS+    E AR++F++     L SW 
Sbjct: 308 ADLAAEQMGKEVHGYMTRVGYDPFSFAASALVHVYSKCGNTETARRVFNQMPRPDLVSWT 367

Query: 382 AMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLG-KWVHELVKS 440
           ++I GY QNG  + A+  F+ +  S   P+ +T   +LSAC   G + +G ++ H + + 
Sbjct: 368 SLIVGYAQNGQPDMALQFFESLLRSGTKPDEITFVGVLSACTHAGLVDIGLEYFHSVKEK 427

Query: 441 RNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSE-VTWNTMISGYGLHGHGLEALQ 499
                       +ID+ A+ G   EA  + D M  K +   W +++ G  +HG+ +E  +
Sbjct: 428 HGLVHTADHYACVIDLLARSGRFKEAENIIDNMPMKPDKFLWASLLGGCRIHGN-IELAE 486

Query: 500 LFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSM 539
             ++ L      +  T++++    ++AGL  E  ++   M
Sbjct: 487 RAAKALFELEPENPATYITLSNIYANAGLWTEETKVRNDM 526



 Score =  138 bits (348), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 113/414 (27%), Positives = 190/414 (45%), Gaps = 16/414 (3%)

Query: 38  QNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTH 97
           Q DL +   +    ++      AR LF  +P  D F +N +I G+ +      ++  +  
Sbjct: 126 QKDLCSWNTMISGYANVGRIEQARKLFDEMPHRDNFSWNAVISGYVSQGWYMEALDLFRM 185

Query: 98  LRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFS 157
           +++N +   + FT S  L+AA+A      G  +HG+ I SG   D  V  AL+DLY K  
Sbjct: 186 MQENESSNCNMFTLSSALAAAAAISSLRRGKEIHGYLIRSGLELDEVVWTALLDLYGKCG 245

Query: 158 WVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVL 217
            +  AR +FD+M +KD V W +MI    ++   ++   +F D++   G   +  + A VL
Sbjct: 246 SLNEARGIFDQMADKDIVSWTTMIHRCFEDGRKKEGFSLFRDLM-GSGVRPNEYTFAGVL 304

Query: 218 PAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLI 277
            A A++   ++G E+     ++G+    +  + LV  YSKCG  E A  +F  + RPDL+
Sbjct: 305 NACADLAAEQMGKEVHGYMTRVGYDPFSFAASALVHVYSKCGNTETARRVFNQMPRPDLV 364

Query: 278 SCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHL-TNCIHSF 336
           S  ++I GY  NG+ + +L+ F  LL S  + +  T VG++      G + +     HS 
Sbjct: 365 SWTSLIVGYAQNGQPDMALQFFESLLRSGTKPDEITFVGVLSACTHAGLVDIGLEYFHSV 424

Query: 337 CLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLAS-WNAMIAGYTQNG---L 392
             K G+V  +     +  + +R    + A  + D    K     W +++ G   +G   L
Sbjct: 425 KEKHGLVHTADHYACVIDLLARSGRFKEAENIIDNMPMKPDKFLWASLLGGCRIHGNIEL 484

Query: 393 TEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESN 446
            E A     E++      NP T  ++ +  A  G      W  E  K RN   N
Sbjct: 485 AERAAKALFELEPE----NPATYITLSNIYANAGL-----WTEE-TKVRNDMDN 528



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 62/189 (32%), Positives = 97/189 (51%), Gaps = 17/189 (8%)

Query: 364 AARKLFDESSE----KSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVA---------P 410
           A R+ F  SS+     +L   +  ++ ++++   EE I LF +    K A         P
Sbjct: 2   AFRRAFSSSSQFHKNLNLNPKDTTLSHHSEHRRFEEIIELFCQQNRLKEAVDYLHRIPQP 61

Query: 411 NPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELF 470
           +P   S++++AC +   + LGK VH   K+ NF   I +S  LI MYAKCG++V+A+ LF
Sbjct: 62  SPRLYSTLIAACLRHRKLELGKRVHAHTKASNFIPGIVISNRLIHMYAKCGSLVDAQMLF 121

Query: 471 DLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVR 530
           D +  K   +WNTMISGY   G   +A +LF EM H        ++ +V+      G   
Sbjct: 122 DEIPQKDLCSWNTMISGYANVGRIEQARKLFDEMPHR----DNFSWNAVISGYVSQGWYM 177

Query: 531 EGDEIFQSM 539
           E  ++F+ M
Sbjct: 178 EALDLFRMM 186



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 76/162 (46%), Gaps = 9/162 (5%)

Query: 27  QTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNE 86
           + H  +   G+       + L H  S    T  AR +F  +P+PDL  +  +I G++ N 
Sbjct: 318 EVHGYMTRVGYDPFSFAASALVHVYSKCGNTETARRVFNQMPRPDLVSWTSLIVGYAQNG 377

Query: 87  MPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYG----SD 142
            P  ++ F+  L + +   PD  T+  VLSA +      IG L + H++   +G    +D
Sbjct: 378 QPDMALQFFESLLR-SGTKPDEITFVGVLSACTHAGLVDIG-LEYFHSVKEKHGLVHTAD 435

Query: 143 LFVGAALVDLYFKFSWVKSARKVFDKMPEK-DTVLWNSMISG 183
            +  A ++DL  +    K A  + D MP K D  LW S++ G
Sbjct: 436 HY--ACVIDLLARSGRFKEAENIIDNMPMKPDKFLWASLLGG 475


>gi|449434238|ref|XP_004134903.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Cucumis sativus]
          Length = 609

 Score =  426 bits (1095), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 214/522 (40%), Positives = 321/522 (61%), Gaps = 1/522 (0%)

Query: 264 AELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERV-NSSTIVGLIPVFY 322
           A  +F  I  P++ + N MI G+  +     ++ LF Q+ A++  + ++ T   L     
Sbjct: 88  AAQIFNQIQAPNIFTWNTMIRGFAESENPSPAVELFSQMHAASSILPDTHTFPFLFKAVA 147

Query: 323 PFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNA 382
               + L   IHS  +++G  S   V  +L  +YS     E+A ++F+  S +   +WN+
Sbjct: 148 KLMDVSLGEGIHSVVVRNGFDSLRFVQNSLVHMYSVFGFAESAYQVFEIMSYRDRVAWNS 207

Query: 383 MIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRN 442
           +I G+  NG+  EA++L++EM +  V P+  T+ S+LSAC +LGA++LG+ VH  +    
Sbjct: 208 VINGFALNGMPNEALTLYREMGSEGVEPDGFTMVSLLSACVELGALALGERVHMYMVKVG 267

Query: 443 FESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFS 502
              N + S AL+D+Y+KCGN  +A+++FD M  +S V+W ++I G  ++G G EAL+LF 
Sbjct: 268 LVQNQHASNALLDLYSKCGNFRDAQKVFDEMEERSVVSWTSLIVGLAVNGLGNEALKLFG 327

Query: 503 EMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRA 562
           E+   G++PS +TF+ VLYACSH G++ EG   F+ M  ++G  P  EH+ CMVD+L RA
Sbjct: 328 ELERQGLKPSEITFVGVLYACSHCGMLDEGFNYFRRMKEEYGILPRIEHHGCMVDLLCRA 387

Query: 563 GQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLS 622
           G++  A ++I+ + V P   +W  LLGAC IH    L  VA  ++  L+  + G  VLLS
Sbjct: 388 GKVGDAYDYIRNMPVPPNAVIWRTLLGACTIHGHLELGEVARAEIQRLEQRHSGDFVLLS 447

Query: 623 NIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLE 682
           N+Y++ER +L    VR+++  + + K PG +L+E+    + F  GD+ HPQS   YAML 
Sbjct: 448 NLYASERRWLDVQNVRKIMLMKGVKKTPGYSLVELKNRVYEFIMGDRSHPQSEETYAMLA 507

Query: 683 KLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLR 742
           K+   ++  G+   TV  L D+EEEEKE  +  H+EK+AIAF L+ T PGT IRI+KNLR
Sbjct: 508 KITQLLKIEGYVPRTVNVLADIEEEEKETALSHHTEKVAIAFMLVNTPPGTPIRIMKNLR 567

Query: 743 VCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           VC DCH A K ISKV  R I+VRD +RFHHFK G CSC DYW
Sbjct: 568 VCADCHLAIKLISKVFEREIIVRDRSRFHHFKDGSCSCKDYW 609



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 93/348 (26%), Positives = 168/348 (48%), Gaps = 5/348 (1%)

Query: 148 ALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTW 207
           ALV L    S+   A ++F+++   +   WN+MI G  ++     ++ +F  M       
Sbjct: 77  ALVSLSAPMSF---AAQIFNQIQAPNIFTWNTMIRGFAESENPSPAVELFSQMHAASSIL 133

Query: 208 LDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELL 267
            D+ +   +  AVA++ ++ LG  I  + ++ GF    +V   LV  YS  G  E A  +
Sbjct: 134 PDTHTFPFLFKAVAKLMDVSLGEGIHSVVVRNGFDSLRFVQNSLVHMYSVFGFAESAYQV 193

Query: 268 FRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHL 327
           F  +   D ++ N++I+G+  NG    +L L+R++ +     +  T+V L+      G L
Sbjct: 194 FEIMSYRDRVAWNSVINGFALNGMPNEALTLYREMGSEGVEPDGFTMVSLLSACVELGAL 253

Query: 328 HLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGY 387
            L   +H + +K G+V N     AL  +YS+      A+K+FDE  E+S+ SW ++I G 
Sbjct: 254 ALGERVHMYMVKVGLVQNQHASNALLDLYSKCGNFRDAQKVFDEMEERSVVSWTSLIVGL 313

Query: 388 TQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLG-KWVHELVKSRNFESN 446
             NGL  EA+ LF E++   + P+ +T   +L AC+  G +  G  +   + +       
Sbjct: 314 AVNGLGNEALKLFGELERQGLKPSEITFVGVLYACSHCGMLDEGFNYFRRMKEEYGILPR 373

Query: 447 IYVSTALIDMYAKCGNIVEARELFDLMS-HKSEVTWNTMISGYGLHGH 493
           I     ++D+  + G + +A +    M    + V W T++    +HGH
Sbjct: 374 IEHHGCMVDLLCRAGKVGDAYDYIRNMPVPPNAVIWRTLLGACTIHGH 421



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 108/414 (26%), Positives = 186/414 (44%), Gaps = 36/414 (8%)

Query: 21  TQSQLTQTHAQIIIHGFQNDLSTVTK-LAHRLSDFKAT-CYARALFFSIPKPDLFLFNVI 78
           +QS+L Q HA  I HG         K L   L    A   +A  +F  I  P++F +N +
Sbjct: 47  SQSKLKQIHAFSIRHGVPPQNPDFNKHLIFALVSLSAPMSFAAQIFNQIQAPNIFTWNTM 106

Query: 79  IRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSG 138
           IRGF+ +E P  ++  ++ +   +++ PD  T+ F+  A +   D S+G  +H   + +G
Sbjct: 107 IRGFAESENPSPAVELFSQMHAASSILPDTHTFPFLFKAVAKLMDVSLGEGIHSVVVRNG 166

Query: 139 YGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFG 198
           + S  FV  +LV +Y  F + +SA +VF+ M  +D V WNS+I+G   N    +++ ++ 
Sbjct: 167 FDSLRFVQNSLVHMYSVFGFAESAYQVFEIMSYRDRVAWNSVINGFALNGMPNEALTLYR 226

Query: 199 DMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKC 258
           +M  + G   D  ++ ++L A  E+  L LG  +    +K+G   + +    L+  YSKC
Sbjct: 227 EM-GSEGVEPDGFTMVSLLSACVELGALALGERVHMYMVKVGLVQNQHASNALLDLYSKC 285

Query: 259 GEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLI 318
           G    A+ +F ++    ++S  ++I G   NG    +L+LF +L     + +  T VG+ 
Sbjct: 286 GNFRDAQKVFDEMEERSVVSWTSLIVGLAVNGLGNEALKLFGELERQGLKPSEITFVGV- 344

Query: 319 PVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLA 378
                     L  C H   L  G     +    +   Y  L  +E               
Sbjct: 345 ----------LYACSHCGMLDEGF----NYFRRMKEEYGILPRIE--------------- 375

Query: 379 SWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGK 432
               M+    + G   +A    + M    V PN V   ++L AC   G + LG+
Sbjct: 376 HHGCMVDLLCRAGKVGDAYDYIRNM---PVPPNAVIWRTLLGACTIHGHLELGE 426


>gi|449442178|ref|XP_004138859.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Cucumis sativus]
 gi|449529652|ref|XP_004171812.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Cucumis sativus]
          Length = 606

 Score =  426 bits (1095), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 223/554 (40%), Positives = 330/554 (59%), Gaps = 6/554 (1%)

Query: 237 LKLGFHDHVYVLTGLVSFYSKCGEVE-RAELLFR---DIVRPDLISCNAMISGYTCNGKT 292
           LKLG H++  VLT   S  S     +  A  LF    D    D    N +I  Y   G +
Sbjct: 53  LKLGLHNNPLVLTKFASISSLIHATDYAASFLFSAEADTRLYDAFLFNTLIRAYAQTGHS 112

Query: 293 -ESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTA 351
            + +L L+  +L  A   N  T   ++        L+L   +H   +K G   +  V   
Sbjct: 113 KDKALALYGIMLHDAILPNKFTYPFVLKACAGLEVLNLGQTVHGSVVKFGFDCDIHVQNT 172

Query: 352 LSTVYSRL-NEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAP 410
           +  +YS     + +ARK+FDE  +    +W+AMI GY + G + EA++LF+EMQ ++V P
Sbjct: 173 MVHMYSCCAGGINSARKVFDEMPKSDSVTWSAMIGGYARVGRSTEAVALFREMQMAEVCP 232

Query: 411 NPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELF 470
           + +T+ S+LSAC  LGA+ LGKW+   ++       + VS ALIDM+AKCG+I +A +LF
Sbjct: 233 DEITMVSMLSACTDLGALELGKWIEAYIERHEIHKPVEVSNALIDMFAKCGDISKALKLF 292

Query: 471 DLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVR 530
             M+ K+ V+W ++I G  +HG G EA  LF EM  SG+ P  V F+ +L ACSH+GLV 
Sbjct: 293 RAMNEKTIVSWTSVIVGMAMHGRGQEATCLFEEMTSSGVAPDDVAFIGLLSACSHSGLVE 352

Query: 531 EGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGA 590
            G E F SM+  +   P  EHY CMVD+  R G +++ALEF++ + +EP P +   L+ A
Sbjct: 353 RGREYFGSMMKKYKLVPKIEHYGCMVDMYCRTGLVKEALEFVRNMPIEPNPVILRTLVSA 412

Query: 591 CMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAP 650
           C  H +  L    ++ L + +P +   +VLLSNIY+    + +   +R+V++ + + K P
Sbjct: 413 CRGHGEFKLGEKITKLLMKHEPLHESNYVLLSNIYAKTLSWEKKTKIREVMEVKGMKKVP 472

Query: 651 GCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKE 710
           G T+IE+    + F +GD+ H Q   IY M++++  +M+++G++  T   L D+ EE+KE
Sbjct: 473 GSTMIEIDNEIYEFVAGDKSHKQHKEIYEMVDEMGREMKKSGYRPSTSEVLLDINEEDKE 532

Query: 711 LMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRF 770
             +  HSEKLAIAFGL+ T PGT IRI+KNLRVC DCH+A+KFISK+  R I++RD NRF
Sbjct: 533 DSLNRHSEKLAIAFGLLRTPPGTPIRIVKNLRVCSDCHSASKFISKIYDREIIMRDRNRF 592

Query: 771 HHFKGGVCSCGDYW 784
           HHFK G CSCGD+W
Sbjct: 593 HHFKSGQCSCGDFW 606



 Score =  166 bits (419), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 137/527 (25%), Positives = 233/527 (44%), Gaps = 68/527 (12%)

Query: 13  LSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKP-- 70
           L+LL+      +LTQ H  I+  G  N+   +TK A   S   AT YA +  FS      
Sbjct: 33  LALLQACNALPKLTQIHTHILKLGLHNNPLVLTKFASISSLIHATDYAASFLFSAEADTR 92

Query: 71  --DLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGV 128
             D FLFN +IR ++     K        +  + A+ P+ FTY FVL A +     ++G 
Sbjct: 93  LYDAFLFNTLIRAYAQTGHSKDKALALYGIMLHDAILPNKFTYPFVLKACAGLEVLNLGQ 152

Query: 129 LLHGHAIVSGYGSDLFVGAALVDLYFKFSW-VKSARKVFDKMPEKDTVLWNSMISGLMKN 187
            +HG  +  G+  D+ V   +V +Y   +  + SARKVFD+MP+ D+V W++MI G  + 
Sbjct: 153 TVHGSVVKFGFDCDIHVQNTMVHMYSCCAGGINSARKVFDEMPKSDSVTWSAMIGGYARV 212

Query: 188 CCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYV 247
               +++ +F +M +      D  ++ ++L A  ++  L LG  I+    +   H  V V
Sbjct: 213 GRSTEAVALFREM-QMAEVCPDEITMVSMLSACTDLGALELGKWIEAYIERHEIHKPVEV 271

Query: 248 LTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAE 307
              L+  ++KCG++ +A  LFR +    ++S  ++I G   +G+ + +  LF ++ +S  
Sbjct: 272 SNALIDMFAKCGDISKALKLFRAMNEKTIVSWTSVIVGMAMHGRGQEATCLFEEMTSSGV 331

Query: 308 RVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARK 367
             +    +GL           L+ C HS  ++ G     S++     V            
Sbjct: 332 APDDVAFIGL-----------LSACSHSGLVERGREYFGSMMKKYKLV------------ 368

Query: 368 LFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGA 427
                    +  +  M+  Y + GL +EA+   + M    + PNPV + +++SAC   G 
Sbjct: 369 -------PKIEHYGCMVDMYCRTGLVKEALEFVRNMP---IEPNPVILRTLVSACRGHGE 418

Query: 428 ISLGKWV------HELVKSRNFE--SNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEV 479
             LG+ +      HE +   N+   SNIY  T   +   K   ++E + +        +V
Sbjct: 419 FKLGEKITKLLMKHEPLHESNYVLLSNIYAKTLSWEKKTKIREVMEVKGM-------KKV 471

Query: 480 TWNTMI----------SGYGLHGHGLEALQLFS----EMLHSGIRPS 512
             +TMI          +G   H    E  ++      EM  SG RPS
Sbjct: 472 PGSTMIEIDNEIYEFVAGDKSHKQHKEIYEMVDEMGREMKKSGYRPS 518


>gi|225431281|ref|XP_002268784.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g44230-like [Vitis vinifera]
          Length = 647

 Score =  426 bits (1095), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 236/660 (35%), Positives = 361/660 (54%), Gaps = 75/660 (11%)

Query: 130 LHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSA--RKVFDKMPEKDTVLWNSMISGLMKN 187
           +H H    G     FV A L+    K         R VF ++   +  LW ++I G    
Sbjct: 58  VHAHIFRKGLEQCCFVLAKLLRTLTKLDVPMDPYPRLVFQQVEYPNPFLWTALIRGYALQ 117

Query: 188 CCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYV 247
             F +S+ ++  M R G   + S +  A+L A +   ++ LG ++         H    +
Sbjct: 118 GPFMESVLLYNSMRRQGIGPV-SFTFTALLKACSAALDVNLGRQV---------HTQTIL 167

Query: 248 LTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAE 307
           + G  S                     DL   N +I  Y   G      R+F ++L    
Sbjct: 168 IGGFGS---------------------DLYVGNTLIDMYVKCGCLGCGHRVFDEML---- 202

Query: 308 RVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARK 367
                                             ++S +S++ A    Y+++  MEAA +
Sbjct: 203 -------------------------------DRDVISWTSLIVA----YAKVGNMEAASE 227

Query: 368 LFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGA 427
           LFD    K + +W AM+ GY QN    EA+ +F+ MQA+ V  + VT+  ++SACAQLGA
Sbjct: 228 LFDGLPMKDMVAWTAMVTGYAQNARPREALEVFERMQAAGVKTDEVTLVGVISACAQLGA 287

Query: 428 ISLGKWVHELVKSRNF--ESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMI 485
                WV ++ +   F   SN+ V +ALIDMYAKCG++ +A ++F+ M  ++  ++++MI
Sbjct: 288 AKYANWVRDVAEQSGFGPTSNVVVGSALIDMYAKCGSVEDAYKVFERMEERNVYSYSSMI 347

Query: 486 SGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGF 545
            G+ +HG    A++LF EML + I+P+ VTF+ VL ACSHAG+V +G ++F  M   HG 
Sbjct: 348 VGFAMHGLAGAAMELFDEMLKTEIKPNRVTFIGVLTACSHAGMVEQGQQLFAMMEECHGV 407

Query: 546 KPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASE 605
            P  +HYACMVD+LGRAG+LE+AL  +K + + P   VWGALLGAC IH + ++A++A+ 
Sbjct: 408 APSEDHYACMVDLLGRAGRLEEALNLVKMMPMNPHGGVWGALLGACRIHGNPDMAQIAAS 467

Query: 606 KLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIE-VGGTPHVF 664
            LFEL+P  +G ++LLSNIY++   +   + VR++++ + L K PGC+ +E   G  H F
Sbjct: 468 HLFELEPNGIGNYILLSNIYASAGRWDDVSKVRKLMRAKGLKKNPGCSWVEGKKGIIHEF 527

Query: 665 TSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAF 724
            +GD  HP+S  I   LE L  +++  G+Q    +  +D+ +EEK+ ++  HSEKLA+AF
Sbjct: 528 FAGDMSHPKSREIKQALEDLLDRLKYLGYQPNLSSVAYDISDEEKKRLLMSHSEKLALAF 587

Query: 725 GLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           GL+ T  G  IRI+KNLR+C DCH+     S++TGR IVVRD  RFHHF+ G CSCG++W
Sbjct: 588 GLLTTNAGCTIRIVKNLRICEDCHSVMCGASQITGREIVVRDNMRFHHFRDGRCSCGNFW 647



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 132/510 (25%), Positives = 230/510 (45%), Gaps = 81/510 (15%)

Query: 4   KTPQSRNLFLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLS--DFKATCYAR 61
           K  +SR   +S+L G    +Q+ Q HA I   G +     + KL   L+  D     Y R
Sbjct: 36  KILESR--LVSVLHGCTHINQVKQVHAHIFRKGLEQCCFVLAKLLRTLTKLDVPMDPYPR 93

Query: 62  ALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASAC 121
            +F  +  P+ FL+  +IRG++       S+  Y  +R+   + P +FT++ +L A SA 
Sbjct: 94  LVFQQVEYPNPFLWTALIRGYALQGPFMESVLLYNSMRRQ-GIGPVSFTFTALLKACSAA 152

Query: 122 CDRSIGVLLHGHAI-VSGYGSDLFVGAALVDLYFK-------------------FSW--- 158
            D ++G  +H   I + G+GSDL+VG  L+D+Y K                    SW   
Sbjct: 153 LDVNLGRQVHTQTILIGGFGSDLYVGNTLIDMYVKCGCLGCGHRVFDEMLDRDVISWTSL 212

Query: 159 ---------VKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLD 209
                    +++A ++FD +P KD V W +M++G  +N   ++++ VF  M +  G   D
Sbjct: 213 IVAYAKVGNMEAASELFDGLPMKDMVAWTAMVTGYAQNARPREALEVFERM-QAAGVKTD 271

Query: 210 STSVAAVLPAVAEVQELRLGMEIQCLGLKLGF--HDHVYVLTGLVSFYSKCGEVERAELL 267
             ++  V+ A A++   +    ++ +  + GF    +V V + L+  Y+KCG VE A  +
Sbjct: 272 EVTLVGVISACAQLGAAKYANWVRDVAEQSGFGPTSNVVVGSALIDMYAKCGSVEDAYKV 331

Query: 268 FRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHL 327
           F  +   ++ S ++MI G+  +G   +++ LF ++L +  + N  T +G+          
Sbjct: 332 FERMEERNVYSYSSMIVGFAMHGLAGAAMELFDEMLKTEIKPNRVTFIGV---------- 381

Query: 328 HLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGY 387
            LT C H     +G+V     L A+         ME    +    SE   A    M+   
Sbjct: 382 -LTACSH-----AGMVEQGQQLFAM---------MEECHGV--APSEDHYA---CMVDLL 421

Query: 388 TQNGLTEEAISLFQEMQASKVAPNPVTVSSILSAC--------AQLGAISLGKWVHELVK 439
            + G  EEA++L + M  +   P+     ++L AC        AQ+ A  L +     + 
Sbjct: 422 GRAGRLEEALNLVKMMPMN---PHGGVWGALLGACRIHGNPDMAQIAASHLFELEPNGIG 478

Query: 440 SRNFESNIYVSTALIDMYAKCGNIVEAREL 469
           +    SNIY S    D  +K   ++ A+ L
Sbjct: 479 NYILLSNIYASAGRWDDVSKVRKLMRAKGL 508



 Score = 53.1 bits (126), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 36/131 (27%), Positives = 59/131 (45%), Gaps = 5/131 (3%)

Query: 417 SILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEA--RELFDLMS 474
           S+L  C  +  +   K VH  +  +  E   +V   L+    K    ++   R +F  + 
Sbjct: 44  SVLHGCTHINQV---KQVHAHIFRKGLEQCCFVLAKLLRTLTKLDVPMDPYPRLVFQQVE 100

Query: 475 HKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDE 534
           + +   W  +I GY L G  +E++ L++ M   GI P   TF ++L ACS A  V  G +
Sbjct: 101 YPNPFLWTALIRGYALQGPFMESVLLYNSMRRQGIGPVSFTFTALLKACSAALDVNLGRQ 160

Query: 535 IFQSMIHDHGF 545
           +    I   GF
Sbjct: 161 VHTQTILIGGF 171


>gi|224136143|ref|XP_002322250.1| predicted protein [Populus trichocarpa]
 gi|222869246|gb|EEF06377.1| predicted protein [Populus trichocarpa]
          Length = 548

 Score =  426 bits (1094), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 220/545 (40%), Positives = 329/545 (60%), Gaps = 1/545 (0%)

Query: 240 GFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLF 299
           GF    Y+   ++  + KCG +  A  LF ++   +L+S N +ISG    G    + RLF
Sbjct: 5   GFEFDQYMRNRVLLMHVKCGMMIDARRLFDEMPERNLVSWNTIISGLVDVGDFMEAFRLF 64

Query: 300 RQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRL 359
             +        S T   +I        + +   +H+  LK GI  +  V  AL  +YS+ 
Sbjct: 65  LNMWEEFSDAGSFTFAVMIRASAGLELISIGRQLHACTLKMGIGDDIFVSCALIDMYSKC 124

Query: 360 NEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSIL 419
             +E AR +F+E  EK+   WN +IAGY  +G +EEA+ ++ EM+ S V  +  T S I+
Sbjct: 125 GSIEDARFVFEEMPEKTTVGWNTIIAGYALHGYSEEALDMYYEMRDSGVKMDHFTFSMIV 184

Query: 420 SACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEV 479
             CA+L ++   K  H  +    F S+I  +TAL+D Y+K G I +AR +FD M+ K+ +
Sbjct: 185 RICARLASVEHAKQAHAALIRHGFGSDIVANTALVDFYSKWGRIEDARHVFDKMASKNVI 244

Query: 480 TWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSM 539
           +WN +I GYG HG G EA++LF +M+   + P+ +TFL+VL ACSH+GL   G EIFQSM
Sbjct: 245 SWNALIGGYGNHGRGSEAVELFEQMIQERMNPNHITFLAVLSACSHSGLSERGWEIFQSM 304

Query: 540 IHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNL 599
             D+  KP A HYACM++++GR G L++AL  I+G   +P   +W ALL AC ++++  L
Sbjct: 305 GRDNRIKPRAMHYACMIELMGREGLLDEALALIRGAPFKPTANMWAALLTACRVNENFEL 364

Query: 600 ARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGG 659
            + A+EKL+ ++P+ +  +++L NIY++  +  +AA V   +K++ L   P C+ IEV  
Sbjct: 365 GKFAAEKLYGMEPDKLNNYIVLLNIYNSAGNLKEAADVVHTLKRKGLRMRPVCSWIEVKR 424

Query: 660 TPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEK 719
            PHVF SGD  HPQ   IY  ++KL  ++ + G+     T L DV+E+E+ + +  HSEK
Sbjct: 425 RPHVFLSGDNRHPQRKEIYQKVDKLMLEISKYGYVPNQKTLLPDVDEQEERVRL-YHSEK 483

Query: 720 LAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCS 779
           LAIAFGLI+T     ++I++  R+C DCH A K I++VTGR IV+RDA RFHHFK G CS
Sbjct: 484 LAIAFGLISTPYWAPLQIVQGHRICGDCHEAIKLIARVTGREIVIRDAGRFHHFKHGHCS 543

Query: 780 CGDYW 784
           C DYW
Sbjct: 544 CEDYW 548



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 118/452 (26%), Positives = 219/452 (48%), Gaps = 45/452 (9%)

Query: 135 IVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSI 194
           I +G+  D ++   ++ ++ K   +  AR++FD+MPE++ V WN++ISGL+    F ++ 
Sbjct: 2   IDNGFEFDQYMRNRVLLMHVKCGMMIDARRLFDEMPERNLVSWNTIISGLVDVGDFMEAF 61

Query: 195 WVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSF 254
            +F +M         S + A ++ A A ++ + +G ++    LK+G  D ++V   L+  
Sbjct: 62  RLFLNMWEEFSD-AGSFTFAVMIRASAGLELISIGRQLHACTLKMGIGDDIFVSCALIDM 120

Query: 255 YSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTI 314
           YSKCG +E A  +F ++     +  N +I+GY  +G +E +L ++ ++  S  +++  T 
Sbjct: 121 YSKCGSIEDARFVFEEMPEKTTVGWNTIIAGYALHGYSEEALDMYYEMRDSGVKMDHFTF 180

Query: 315 VGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSE 374
             ++ +      +      H+  ++ G  S+    TAL   YS+   +E AR +FD+ + 
Sbjct: 181 SMIVRICARLASVEHAKQAHAALIRHGFGSDIVANTALVDFYSKWGRIEDARHVFDKMAS 240

Query: 375 KSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWV 434
           K++ SWNA+I GY  +G   EA+ LF++M   ++ PN +T  ++LSAC+  G    G W 
Sbjct: 241 KNVISWNALIGGYGNHGRGSEAVELFEQMIQERMNPNHITFLAVLSACSHSGLSERG-W- 298

Query: 435 HELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHG 494
            E+ +S   ++ I        M+  C                       MI   G  G  
Sbjct: 299 -EIFQSMGRDNRIKPRA----MHYAC-----------------------MIELMGREGLL 330

Query: 495 LEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHD-HGFKPLA-EHY 552
            EAL L      +  +P+   + ++L AC     V E  E+ +      +G +P    +Y
Sbjct: 331 DEALALIRG---APFKPTANMWAALLTACR----VNENFELGKFAAEKLYGMEPDKLNNY 383

Query: 553 ACMVDILGRAGQLEKALEFI-----KGLAVEP 579
             +++I   AG L++A + +     KGL + P
Sbjct: 384 IVLLNIYNSAGNLKEAADVVHTLKRKGLRMRP 415



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 106/418 (25%), Positives = 198/418 (47%), Gaps = 38/418 (9%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           AR LF  +P+ +L  +N II G  +      +   + ++ +  +    +FT++ ++ A++
Sbjct: 29  ARRLFDEMPERNLVSWNTIISGLVDVGDFMEAFRLFLNMWEEFS-DAGSFTFAVMIRASA 87

Query: 120 ACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNS 179
                SIG  LH   +  G G D+FV  AL+D+Y K   ++ AR VF++MPEK TV WN+
Sbjct: 88  GLELISIGRQLHACTLKMGIGDDIFVSCALIDMYSKCGSIEDARFVFEEMPEKTTVGWNT 147

Query: 180 MISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKL 239
           +I+G   +   ++++ ++ +M R+ G  +D  + + ++   A +  +    +     ++ 
Sbjct: 148 IIAGYALHGYSEEALDMYYEM-RDSGVKMDHFTFSMIVRICARLASVEHAKQAHAALIRH 206

Query: 240 GFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLF 299
           GF   +   T LV FYSK G +E A  +F  +   ++IS NA+I GY  +G+   ++ LF
Sbjct: 207 GFGSDIVANTALVDFYSKWGRIEDARHVFDKMASKNVISWNALIGGYGNHGRGSEAVELF 266

Query: 300 RQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRL 359
            Q++   ER+N + I  L           L+ C HS   + G             ++  +
Sbjct: 267 EQMI--QERMNPNHITFLAV---------LSACSHSGLSERGW-----------EIFQSM 304

Query: 360 NEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSIL 419
                     D   +     +  MI    + GL +EA++L   ++ +   P     +++L
Sbjct: 305 GR--------DNRIKPRAMHYACMIELMGREGLLDEALAL---IRGAPFKPTANMWAALL 353

Query: 420 SACAQLGAISLGKWVHELVKSRNFES-NIYVSTALIDMYAKCGNIVEARELFDLMSHK 476
           +AC       LGK+  E +     +  N Y+   L+++Y   GN+ EA ++   +  K
Sbjct: 354 TACRVNENFELGKFAAEKLYGMEPDKLNNYI--VLLNIYNSAGNLKEAADVVHTLKRK 409



 Score = 42.7 bits (99), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 40/172 (23%), Positives = 75/172 (43%), Gaps = 13/172 (7%)

Query: 27  QTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNE 86
           Q HA +I HGF +D+   T L    S +     AR +F  +   ++  +N +I G+ N+ 
Sbjct: 198 QAHAALIRHGFGSDIVANTALVDFYSKWGRIEDARHVFDKMASKNVISWNALIGGYGNHG 257

Query: 87  MPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVG 146
               ++  +  + +   + P++ T+  VLSA    C  S G+   G  I    G D  + 
Sbjct: 258 RGSEAVELFEQMIQER-MNPNHITFLAVLSA----CSHS-GLSERGWEIFQSMGRDNRIK 311

Query: 147 ------AALVDLYFKFSWVKSARKVFDKMPEKDTV-LWNSMISGLMKNCCFQ 191
                 A +++L  +   +  A  +    P K T  +W ++++    N  F+
Sbjct: 312 PRAMHYACMIELMGREGLLDEALALIRGAPFKPTANMWAALLTACRVNENFE 363


>gi|359477907|ref|XP_002270439.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g04840-like [Vitis vinifera]
          Length = 677

 Score =  426 bits (1094), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 237/627 (37%), Positives = 353/627 (56%), Gaps = 44/627 (7%)

Query: 162 ARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVA 221
           A  +F      +  ++N++I GL +N  F+ S+  F  M+R      D  ++  VL +VA
Sbjct: 91  ALSIFRCFDHPNLFVFNALIRGLAENSRFEGSVSHFVLMLRLS-IRPDRLTLPFVLKSVA 149

Query: 222 EVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPD----LI 277
            + ++ LG  +    +KLG     +V   LV  Y K GE+     LF +  + +    ++
Sbjct: 150 ALVDVGLGRCLHGGVMKLGLEFDSFVRVSLVDMYVKIGELGFGLQLFDESPQRNKAESIL 209

Query: 278 SCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFC 337
             N +I+G    G    +  LF    A  ER                             
Sbjct: 210 LWNVLINGCCKVGDLSKAASLFE---AMPER----------------------------- 237

Query: 338 LKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAI 397
                  N+    +L   + R  +++ AR+LF +  EK++ SW  MI G++QNG  E+A+
Sbjct: 238 -------NAGSWNSLINGFVRNGDLDRARELFVQMPEKNVVSWTTMINGFSQNGDHEKAL 290

Query: 398 SLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMY 457
           S+F  M    V PN +TV S L AC ++GA+ +G+ +H  + S  F+ N  + TAL+DMY
Sbjct: 291 SMFWRMLEEGVRPNDLTVVSALLACTKIGALQVGERIHNYLSSNGFQLNRGIGTALVDMY 350

Query: 458 AKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFL 517
           AKCGNI  A  +F     K  +TW+ MI G+ +HG   +ALQ F +M  +GI P  V FL
Sbjct: 351 AKCGNIKSASRVFVETKGKDLLTWSVMIWGWAIHGCFDQALQCFVKMKSAGINPDEVIFL 410

Query: 518 SVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAV 577
           ++L ACSH+G V +G   F+SM  D+  +P  +HY  +VD+LGRAG+L++AL FI+ + +
Sbjct: 411 AILTACSHSGNVDQGLNFFESMRLDYSIEPTMKHYTLIVDLLGRAGRLDEALSFIQSMPI 470

Query: 578 EPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATV 637
            P   +WGAL  AC  HK+  +A + +EKL +L+P++ G +V LSN+Y+A   +     V
Sbjct: 471 NPDFVIWGALFCACRAHKNIEMAELTAEKLLQLEPKHPGSYVFLSNVYAAVGRWEDVERV 530

Query: 638 RQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTET 697
           R ++K R + K PG + IEV G  H F +GD  H ++  I   LE++    ++ G+  ET
Sbjct: 531 RTLMKNRGVEKDPGWSYIEVEGQVHSFVAGDHAHVRAEEISLKLEEITASAKQEGYMPET 590

Query: 698 VTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKV 757
              LH++EEEEKE  +  HSEKLA+AFGLI+T PG+ IRI+KNLRVC DCH+  K+ SK+
Sbjct: 591 AWVLHNIEEEEKEDALGSHSEKLALAFGLISTAPGSTIRIVKNLRVCGDCHSMMKYASKL 650

Query: 758 TGRVIVVRDANRFHHFKGGVCSCGDYW 784
           + R I++RD  RFHHFK G CSCGDYW
Sbjct: 651 SRREIILRDIKRFHHFKDGTCSCGDYW 677



 Score =  196 bits (497), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 138/528 (26%), Positives = 247/528 (46%), Gaps = 54/528 (10%)

Query: 4   KTPQSRNLFLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARAL 63
           ++P++   F+ L+  + T  QL Q HAQI +H   ++   VT+L       K+  YA ++
Sbjct: 37  RSPETH--FIPLIHASNTLPQLHQIHAQIFLHNLFSNSRVVTQLISSSCSLKSLDYALSI 94

Query: 64  FFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCD 123
           F     P+LF+FN +IRG + N   + S+  +  L    ++ PD  T  FVL + +A  D
Sbjct: 95  FRCFDHPNLFVFNALIRGLAENSRFEGSVSHFV-LMLRLSIRPDRLTLPFVLKSVAALVD 153

Query: 124 RSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDT----VLWNS 179
             +G  LHG  +  G   D FV  +LVD+Y K   +    ++FD+ P+++     +LWN 
Sbjct: 154 VGLGRCLHGGVMKLGLEFDSFVRVSLVDMYVKIGELGFGLQLFDESPQRNKAESILLWNV 213

Query: 180 MISGLMKNCCFQDSIWVFGDMV-RNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLK 238
           +I+G  K      +  +F  M  RN G+W                               
Sbjct: 214 LINGCCKVGDLSKAASLFEAMPERNAGSW------------------------------- 242

Query: 239 LGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRL 298
                       L++ + + G+++RA  LF  +   +++S   MI+G++ NG  E +L +
Sbjct: 243 ----------NSLINGFVRNGDLDRARELFVQMPEKNVVSWTTMINGFSQNGDHEKALSM 292

Query: 299 FRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSR 358
           F ++L    R N  T+V  +      G L +   IH++   +G   N  + TAL  +Y++
Sbjct: 293 FWRMLEEGVRPNDLTVVSALLACTKIGALQVGERIHNYLSSNGFQLNRGIGTALVDMYAK 352

Query: 359 LNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSI 418
              +++A ++F E+  K L +W+ MI G+  +G  ++A+  F +M+++ + P+ V   +I
Sbjct: 353 CGNIKSASRVFVETKGKDLLTWSVMIWGWAIHGCFDQALQCFVKMKSAGINPDEVIFLAI 412

Query: 419 LSACAQLGAISLGKWVHELVK-SRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKS 477
           L+AC+  G +  G    E ++   + E  +   T ++D+  + G + EA      M    
Sbjct: 413 LTACSHSGNVDQGLNFFESMRLDYSIEPTMKHYTLIVDLLGRAGRLDEALSFIQSMPINP 472

Query: 478 E-VTWNTMISGYGLHGHGLEALQLFSEMLHS--GIRPSGVTFLSVLYA 522
           + V W  +      H + +E  +L +E L       P    FLS +YA
Sbjct: 473 DFVIWGALFCACRAHKN-IEMAELTAEKLLQLEPKHPGSYVFLSNVYA 519


>gi|32487551|emb|CAE03754.1| OSJNBa0013K16.3 [Oryza sativa Japonica Group]
          Length = 865

 Score =  426 bits (1094), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 259/791 (32%), Positives = 402/791 (50%), Gaps = 81/791 (10%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           A  LF  +P+ D+  +N ++ G+         +  +  + ++    P+ FT+  V+ +  
Sbjct: 90  AEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETFVSMHRSGDSLPNAFTFCCVMKSCG 149

Query: 120 ACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVF------------- 166
           A   R +   L G      +  D  V  ALVD++ +  +V  A ++F             
Sbjct: 150 ALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIERPTIFCRNS 209

Query: 167 ------------------DKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWL 208
                             + M E+D V WN MI+ L ++   ++++ +  +M R G   L
Sbjct: 210 MLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKG-VRL 268

Query: 209 DSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLF 268
           DST+  + L A A +  L  G ++    ++       YV + L+  Y+KCG  + A+ +F
Sbjct: 269 DSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVF 328

Query: 269 RDIVRPDLISCNAMISG---YTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFG 325
             +   + +S   +I G   Y C  K   S+ LF Q+ A    ++   +  LI   +   
Sbjct: 329 NSLQDRNSVSWTVLIGGSLQYECFSK---SVELFNQMRAELMAIDQFALATLISGCFNRM 385

Query: 326 HLHLTNCIHSFCLKSG-----IVSNSSV--------------------------LTALST 354
            L L   +HS CLKSG     +VSNS +                           T++ T
Sbjct: 386 DLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMIT 445

Query: 355 VYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASK-VAPNPV 413
            YS++  +  AR+ FD  + ++  +WNAM+  Y Q+G  E+ + ++  M + K V P+ V
Sbjct: 446 AYSQIGNIIKAREFFDGMATRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWV 505

Query: 414 TVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLM 473
           T  ++   CA +GA  LG  +           N+ V+ A I MY+KCG I EA++LFDL+
Sbjct: 506 TYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKLFDLL 565

Query: 474 SHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGD 533
           + K  V+WN MI+GY  HG G +A + F +ML  G +P  +++++VL  CSH+GLV+EG 
Sbjct: 566 NGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQEGK 625

Query: 534 EIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMI 593
             F  M   HG  P  EH++CMVD+LGRAG L +A + I  + ++P   VWGALL AC I
Sbjct: 626 LYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGALLSACKI 685

Query: 594 HKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCT 653
           H +  LA +A++ +FELD  + G ++LL+ IYS       +A VR++++ + + K PG +
Sbjct: 686 HGNDELAELAAKHVFELDSPDSGSYMLLAKIYSDAGKSDDSAQVRKLMRDKGIKKNPGYS 745

Query: 654 LIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMM 713
            +EV    HVF + D  HPQ  AI   +++L  K+   G+           E    E+  
Sbjct: 746 WMEVENKVHVFKADDVSHPQVIAIRNKMDELMEKIAHLGYVR--------TESPRSEIH- 796

Query: 714 KVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHF 773
             HSEKLA+AFG+++      I I+KNLR+C DCHT  K IS VT R  V+RD  RFHHF
Sbjct: 797 --HSEKLAVAFGIMSLPAWMPIHIMKNLRICGDCHTVIKLISSVTDREFVIRDGVRFHHF 854

Query: 774 KGGVCSCGDYW 784
           K G CSCGDYW
Sbjct: 855 KSGSCSCGDYW 865



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 109/450 (24%), Positives = 202/450 (44%), Gaps = 63/450 (14%)

Query: 149 LVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWL 208
           +++ Y K   +  A ++FD+MP +D   WN+++SG  +   F D +  F  M R+G +  
Sbjct: 77  MMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETFVSMHRSGDSLP 136

Query: 209 DSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLF 268
           ++ +   V+ +   +    L  ++  L  K  F     V T LV  + +CG V+ A  LF
Sbjct: 137 NAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLF 196

Query: 269 RDIVRP-------------------------------DLISCNAMISGYTCNGKTESSLR 297
             I RP                               D++S N MI+  + +G+   +L 
Sbjct: 197 SQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALG 256

Query: 298 LFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYS 357
           L  ++     R++S+T    +        L     +H+  ++S    +  V +AL  +Y+
Sbjct: 257 LVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYA 316

Query: 358 RLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSS 417
           +    + A+++F+   +++  SW  +I G  Q     +++ LF +M+A  +A +   +++
Sbjct: 317 KCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALAT 376

Query: 418 ILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKC----------------- 460
           ++S C     + LG+ +H L         I VS +LI +YAKC                 
Sbjct: 377 LISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERD 436

Query: 461 --------------GNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEML- 505
                         GNI++ARE FD M+ ++ +TWN M+  Y  HG   + L+++S ML 
Sbjct: 437 IVSWTSMITAYSQIGNIIKAREFFDGMATRNAITWNAMLGAYIQHGAEEDGLKMYSAMLS 496

Query: 506 HSGIRPSGVTFLSVLYACSHAGLVREGDEI 535
              + P  VT++++   C+  G  + GD+I
Sbjct: 497 QKDVTPDWVTYVTLFRGCADIGANKLGDQI 526



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 58/262 (22%), Positives = 111/262 (42%), Gaps = 11/262 (4%)

Query: 38  QNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTH 97
           + D+ + T +    S       AR  F  +   +   +N ++  +  +   +  +  Y+ 
Sbjct: 434 ERDIVSWTSMITAYSQIGNIIKAREFFDGMATRNAITWNAMLGAYIQHGAEEDGLKMYSA 493

Query: 98  LRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFS 157
           +     +TPD  TY  +    +      +G  + GH + +G   ++ V  A + +Y K  
Sbjct: 494 MLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCG 553

Query: 158 WVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVL 217
            +  A+K+FD +  KD V WN+MI+G  ++   + +   F DM+  G    D  S  AVL
Sbjct: 554 RISEAQKLFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAK-PDYISYVAVL 612

Query: 218 PAVAE---VQELRL--GMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEV-ERAELLFRDI 271
              +    VQE +L   M  +  G+  G        + +V    + G + E  +L+ +  
Sbjct: 613 SGCSHSGLVQEGKLYFDMMTRVHGISPGLEH----FSCMVDLLGRAGHLTEAKDLIDKMP 668

Query: 272 VRPDLISCNAMISGYTCNGKTE 293
           ++P      A++S    +G  E
Sbjct: 669 MKPTAEVWGALLSACKIHGNDE 690



 Score = 58.9 bits (141), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 44/154 (28%), Positives = 74/154 (48%), Gaps = 5/154 (3%)

Query: 416 SSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSH 475
           +++L A    GA+S  +    L+++   E N+     +++ YAK G++ +A ELFD M  
Sbjct: 43  NTLLHAYLSCGALSDAR---RLLRADIKEPNVITHNIMMNGYAKQGSLSDAEELFDRMPR 99

Query: 476 KSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIR-PSGVTFLSVLYACSHAGLVREGDE 534
           +   +WNT++SGY      L+ L+ F  M  SG   P+  TF  V+ +C   G  RE   
Sbjct: 100 RDVASWNTLMSGYFQARRFLDGLETFVSMHRSGDSLPNAFTFCCVMKSCGALG-CRELAP 158

Query: 535 IFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKA 568
               +     F    +    +VD+  R G ++ A
Sbjct: 159 QLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFA 192


>gi|297743898|emb|CBI36868.3| unnamed protein product [Vitis vinifera]
          Length = 541

 Score =  426 bits (1094), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 212/500 (42%), Positives = 309/500 (61%), Gaps = 4/500 (0%)

Query: 289 NGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSV 348
            G T S + +F ++     + +  T   L+  F     LHL   +H+  L+ G+  +  V
Sbjct: 42  TGPTHSPISIFVRMRFHGVQPDFHTFPFLLQSFASPSLLHLGRSVHAQILRFGLAIDPFV 101

Query: 349 LTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQ---A 405
            T+L ++YS    ++ AR LF    E+++ SW+ MI GY + G  +EA++LF+EMQ    
Sbjct: 102 QTSLISMYSSSGLVDMARNLFAVMPERNVISWSCMINGYVRCGQYKEALALFREMQMLGV 161

Query: 406 SKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVE 465
           + V PN  T+S +L+AC +LGA+  GKW H  +       ++ + TALIDMYAKCG++ +
Sbjct: 162 NDVRPNEFTMSGVLAACGRLGALEHGKWAHAYIDKCGMPVDVVLGTALIDMYAKCGSVEK 221

Query: 466 ARELF-DLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACS 524
           A  +F +L  +K  + W+ MISG  +HG   E + LFS+M++ G+RP+ VTFL+V  AC 
Sbjct: 222 ATWVFSNLGPNKDVMAWSAMISGLAMHGLAEECVGLFSKMINQGVRPNAVTFLAVFCACV 281

Query: 525 HAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVW 584
           H GLV EG +  + M  D+   P  +HY CMVD+ GRAG++++A   +K + +EP   VW
Sbjct: 282 HGGLVSEGKDYLRRMTEDYSIIPTIQHYGCMVDLYGRAGRIKEAWNVVKSMPMEPDVLVW 341

Query: 585 GALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKR 644
           GALL    +H D     +A +KL EL+P N G +VLLSN+Y+    +     VR +++  
Sbjct: 342 GALLSGSRMHGDIETCELALKKLIELEPTNSGAYVLLSNVYAKRGRWEDVRHVRDLMETM 401

Query: 645 KLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDV 704
            + K PGC+LIEVGG  H F  GD  HP++  I+ MLE++  +++  G+   T   L D+
Sbjct: 402 GIKKVPGCSLIEVGGVLHEFFVGDDSHPETRQIHMMLEEILERLKVEGYVGNTKEVLLDL 461

Query: 705 EEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVV 764
           +EE KEL + +HSEKLA+A+G + T PGT IRI+KNLR+C DCH A K ISKV  R I+V
Sbjct: 462 DEEGKELALSLHSEKLALAYGFLKTSPGTPIRIVKNLRICRDCHVAIKMISKVFDREIIV 521

Query: 765 RDANRFHHFKGGVCSCGDYW 784
           RD NRFHHF  G+CSC DYW
Sbjct: 522 RDCNRFHHFTQGLCSCRDYW 541



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 103/420 (24%), Positives = 186/420 (44%), Gaps = 45/420 (10%)

Query: 63  LFFSIPKPDLFLFNVIIRGFSNNEMPK-----SSICFYTHLRKNTALTPDNFTYSFVLSA 117
           L FS P  + FL+N +IR              S I  +  +R +  + PD  T+ F+L +
Sbjct: 15  LHFSHPTLESFLWNTLIRAHVQARAQPTGPTHSPISIFVRMRFH-GVQPDFHTFPFLLQS 73

Query: 118 ASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLW 177
            ++     +G  +H   +  G   D FV  +L+ +Y     V  AR +F  MPE++ + W
Sbjct: 74  FASPSLLHLGRSVHAQILRFGLAIDPFVQTSLISMYSSSGLVDMARNLFAVMPERNVISW 133

Query: 178 NSMISGLMKNCCFQDSIWVFGDMVRNG--GTWLDSTSVAAVLPAVAEVQELRLGMEIQCL 235
           + MI+G ++   +++++ +F +M   G      +  +++ VL A   +  L  G      
Sbjct: 134 SCMINGYVRCGQYKEALALFREMQMLGVNDVRPNEFTMSGVLAACGRLGALEHGKWAHAY 193

Query: 236 GLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDI-VRPDLISCNAMISGYTCNGKTES 294
             K G    V + T L+  Y+KCG VE+A  +F ++    D+++ +AMISG   +G  E 
Sbjct: 194 IDKCGMPVDVVLGTALIDMYAKCGSVEKATWVFSNLGPNKDVMAWSAMISGLAMHGLAEE 253

Query: 295 SLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALST 354
            + LF +++    R N+ T + +              C+H      G+VS          
Sbjct: 254 CVGLFSKMINQGVRPNAVTFLAV-----------FCACVH-----GGLVSEG------KD 291

Query: 355 VYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVT 414
              R+ E        D S   ++  +  M+  Y + G  +EA ++ + M    + P+ + 
Sbjct: 292 YLRRMTE--------DYSIIPTIQHYGCMVDLYGRAGRIKEAWNVVKSM---PMEPDVLV 340

Query: 415 VSSILSACAQLGAISLGKW-VHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLM 473
             ++LS     G I   +  + +L++     S  YV   L ++YAK G   + R + DLM
Sbjct: 341 WGALLSGSRMHGDIETCELALKKLIELEPTNSGAYV--LLSNVYAKRGRWEDVRHVRDLM 398



 Score = 83.2 bits (204), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 83/312 (26%), Positives = 143/312 (45%), Gaps = 25/312 (8%)

Query: 28  THAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNEM 87
            HAQI+  G   D    T L    S       AR LF  +P+ ++  ++ +I G+     
Sbjct: 86  VHAQILRFGLAIDPFVQTSLISMYSSSGLVDMARNLFAVMPERNVISWSCMINGYVRCGQ 145

Query: 88  PKSSICFYTHLRK--NTALTPDNFTYSFVLSAASACCDRSIGVLLHG---HAIVS--GYG 140
            K ++  +  ++      + P+ FT S VL+A    C R +G L HG   HA +   G  
Sbjct: 146 YKEALALFREMQMLGVNDVRPNEFTMSGVLAA----CGR-LGALEHGKWAHAYIDKCGMP 200

Query: 141 SDLFVGAALVDLYFKFSWVKSARKVFDKM-PEKDTVLWNSMISGLMKNCCFQDSIWVFGD 199
            D+ +G AL+D+Y K   V+ A  VF  + P KD + W++MISGL  +   ++ + +F  
Sbjct: 201 VDVVLGTALIDMYAKCGSVEKATWVFSNLGPNKDVMAWSAMISGLAMHGLAEECVGLFSK 260

Query: 200 MVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLT-----GLVSF 254
           M+ N G   ++ +  AV  A      +  G +     L+    D+  + T      +V  
Sbjct: 261 MI-NQGVRPNAVTFLAVFCACVHGGLVSEGKDY----LRRMTEDYSIIPTIQHYGCMVDL 315

Query: 255 YSKCGEVERAELLFRDI-VRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSST 313
           Y + G ++ A  + + + + PD++   A++SG   +G  E+     ++L+   E  NS  
Sbjct: 316 YGRAGRIKEAWNVVKSMPMEPDVLVWGALLSGSRMHGDIETCELALKKLI-ELEPTNSGA 374

Query: 314 IVGLIPVFYPFG 325
            V L  V+   G
Sbjct: 375 YVLLSNVYAKRG 386


>gi|297745783|emb|CBI15839.3| unnamed protein product [Vitis vinifera]
          Length = 505

 Score =  426 bits (1094), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 204/462 (44%), Positives = 291/462 (62%), Gaps = 2/462 (0%)

Query: 325 GHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLAS--WNA 382
           G   L    H   +K G   +  + T L   Y++   +E AR LFD  +E++  S  WN 
Sbjct: 44  GEAQLGEAFHCQIMKMGFEYDMILQTGLLDFYAKHGYVEEARNLFDNMTERNSNSVTWNT 103

Query: 383 MIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRN 442
           MI+ Y Q G    AIS+FQ+MQ+  V P  VT+ S+LSACA LGA+ +G+W+H  ++++ 
Sbjct: 104 MISAYVQCGEFGTAISMFQQMQSENVKPTEVTMVSLLSACAHLGALDMGEWIHGYIRTKR 163

Query: 443 FESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFS 502
            + ++ +  ALIDMY KCG +  A ++F  +S K+   WN++I G G++G G EA+  F 
Sbjct: 164 LKIDVVLGNALIDMYCKCGALEAAIDVFHGLSRKNIFCWNSIIVGLGMNGRGEEAIAAFI 223

Query: 503 EMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRA 562
            M   GI+P GVTF+ +L  CSH+GL+  G   F  M+  +G +P  EHY CMVD+LGRA
Sbjct: 224 VMEKEGIKPDGVTFVGILSGCSHSGLLSAGQRYFSEMLGVYGLEPGVEHYGCMVDLLGRA 283

Query: 563 GQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLS 622
           G L++ALE I+ + ++P   V G+LL AC IHKDT L    +++L ELDP + G +V LS
Sbjct: 284 GYLKEALELIRAMPMKPNSMVLGSLLRACQIHKDTKLGEQVTQQLLELDPCDGGNYVFLS 343

Query: 623 NIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLE 682
           N+Y++   +    T R+++ KR + K PGC+ IEV    H F +GD  HPQ T I A L+
Sbjct: 344 NLYASLSRWDDVNTCRKLMIKRGVHKTPGCSSIEVNNIVHEFVAGDTSHPQFTQINAFLD 403

Query: 683 KLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLR 742
           ++  +++  G    T   LHD+EEEEKE  ++ HSE++A+AFGL++T PG  IR++KNLR
Sbjct: 404 EIAKELKGQGHVPNTANVLHDIEEEEKEGAIRYHSERIAVAFGLMSTPPGKTIRVVKNLR 463

Query: 743 VCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
            C DCH+A K IS    R I+VRD  RFHHF+ G CSC DYW
Sbjct: 464 TCSDCHSAMKLISNAFKREIIVRDRKRFHHFRNGSCSCNDYW 505



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 93/336 (27%), Positives = 160/336 (47%), Gaps = 6/336 (1%)

Query: 192 DSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGL 251
           D +  +  M+RN       TS + +L + A   E +LG    C  +K+GF   + + TGL
Sbjct: 13  DFLGFYSGMLRND-VLPSKTSFSLILRSCAISGEAQLGEAFHCQIMKMGFEYDMILQTGL 71

Query: 252 VSFYSKCGEVERAELLFRDIVR--PDLISCNAMISGYTCNGKTESSLRLFRQLLASAERV 309
           + FY+K G VE A  LF ++     + ++ N MIS Y   G+  +++ +F+Q+ +   + 
Sbjct: 72  LDFYAKHGYVEEARNLFDNMTERNSNSVTWNTMISAYVQCGEFGTAISMFQQMQSENVKP 131

Query: 310 NSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLF 369
              T+V L+      G L +   IH +     +  +  +  AL  +Y +   +EAA  +F
Sbjct: 132 TEVTMVSLLSACAHLGALDMGEWIHGYIRTKRLKIDVVLGNALIDMYCKCGALEAAIDVF 191

Query: 370 DESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAIS 429
              S K++  WN++I G   NG  EEAI+ F  M+   + P+ VT   ILS C+  G +S
Sbjct: 192 HGLSRKNIFCWNSIIVGLGMNGRGEEAIAAFIVMEKEGIKPDGVTFVGILSGCSHSGLLS 251

Query: 430 LG-KWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHK-SEVTWNTMISG 487
            G ++  E++     E  +     ++D+  + G + EA EL   M  K + +   +++  
Sbjct: 252 AGQRYFSEMLGVYGLEPGVEHYGCMVDLLGRAGYLKEALELIRAMPMKPNSMVLGSLLRA 311

Query: 488 YGLHGHGLEALQLFSEMLHSGIRPSG-VTFLSVLYA 522
             +H       Q+  ++L       G   FLS LYA
Sbjct: 312 CQIHKDTKLGEQVTQQLLELDPCDGGNYVFLSNLYA 347



 Score =  103 bits (256), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 64/196 (32%), Positives = 102/196 (52%), Gaps = 3/196 (1%)

Query: 383 MIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRN 442
           MI    ++G+  + +  +  M  + V P+  + S IL +CA  G   LG+  H  +    
Sbjct: 1   MIRVSLESGVCPDFLGFYSGMLRNDVLPSKTSFSLILRSCAISGEAQLGEAFHCQIMKMG 60

Query: 443 FESNIYVSTALIDMYAKCGNIVEARELFDLMSHK--SEVTWNTMISGYGLHGHGLEALQL 500
           FE ++ + T L+D YAK G + EAR LFD M+ +  + VTWNTMIS Y   G    A+ +
Sbjct: 61  FEYDMILQTGLLDFYAKHGYVEEARNLFDNMTERNSNSVTWNTMISAYVQCGEFGTAISM 120

Query: 501 FSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILG 560
           F +M    ++P+ VT +S+L AC+H G +  G+ I    I     K        ++D+  
Sbjct: 121 FQQMQSENVKPTEVTMVSLLSACAHLGALDMGEWI-HGYIRTKRLKIDVVLGNALIDMYC 179

Query: 561 RAGQLEKALEFIKGLA 576
           + G LE A++   GL+
Sbjct: 180 KCGALEAAIDVFHGLS 195



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 94/394 (23%), Positives = 166/394 (42%), Gaps = 50/394 (12%)

Query: 89  KSSIC-----FYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDL 143
           +S +C     FY+ + +N  L P   ++S +L + +   +  +G   H   +  G+  D+
Sbjct: 7   ESGVCPDFLGFYSGMLRNDVL-PSKTSFSLILRSCAISGEAQLGEAFHCQIMKMGFEYDM 65

Query: 144 FVGAALVDLYFKFSWVKSARKVFDKMPEK--DTVLWNSMISGLMKNCCFQDSIWVFGDMV 201
            +   L+D Y K  +V+ AR +FD M E+  ++V WN+MIS  ++   F  +I +F  M 
Sbjct: 66  ILQTGLLDFYAKHGYVEEARNLFDNMTERNSNSVTWNTMISAYVQCGEFGTAISMFQQMQ 125

Query: 202 RNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEV 261
                  + T V ++L A A +  L +G  I            V +   L+  Y KCG +
Sbjct: 126 SENVKPTEVTMV-SLLSACAHLGALDMGEWIHGYIRTKRLKIDVVLGNALIDMYCKCGAL 184

Query: 262 ERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVF 321
           E A  +F  + R ++   N++I G   NG+ E ++  F  +     + +  T VG+    
Sbjct: 185 EAAIDVFHGLSRKNIFCWNSIIVGLGMNGRGEEAIAAFIVMEKEGIKPDGVTFVGI---- 240

Query: 322 YPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWN 381
                  L+ C HS  L +G        + +  VY                 E  +  + 
Sbjct: 241 -------LSGCSHSGLLSAG----QRYFSEMLGVYGL---------------EPGVEHYG 274

Query: 382 AMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSR 441
            M+    + G  +EA+ L + M    + PN + + S+L AC       LG+ V + +   
Sbjct: 275 CMVDLLGRAGYLKEALELIRAM---PMKPNSMVLGSLLRACQIHKDTKLGEQVTQQLLEL 331

Query: 442 N--------FESNIYVSTALIDMYAKCGNIVEAR 467
           +        F SN+Y S +  D    C  ++  R
Sbjct: 332 DPCDGGNYVFLSNLYASLSRWDDVNTCRKLMIKR 365



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 65/288 (22%), Positives = 126/288 (43%), Gaps = 9/288 (3%)

Query: 22  QSQLTQT-HAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPK--PDLFLFNVI 78
           ++QL +  H QI+  GF+ D+   T L    +       AR LF ++ +   +   +N +
Sbjct: 45  EAQLGEAFHCQIMKMGFEYDMILQTGLLDFYAKHGYVEEARNLFDNMTERNSNSVTWNTM 104

Query: 79  IRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSG 138
           I  +       ++I  +  ++    + P   T   +LSA +      +G  +HG+     
Sbjct: 105 ISAYVQCGEFGTAISMFQQMQSEN-VKPTEVTMVSLLSACAHLGALDMGEWIHGYIRTKR 163

Query: 139 YGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFG 198
              D+ +G AL+D+Y K   +++A  VF  +  K+   WNS+I GL  N   +++I  F 
Sbjct: 164 LKIDVVLGNALIDMYCKCGALEAAIDVFHGLSRKNIFCWNSIIVGLGMNGRGEEAIAAFI 223

Query: 199 DMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEI--QCLGLKLGFHDHVYVLTGLVSFYS 256
            M +  G   D  +   +L   +    L  G     + LG+  G    V     +V    
Sbjct: 224 VMEKE-GIKPDGVTFVGILSGCSHSGLLSAGQRYFSEMLGV-YGLEPGVEHYGCMVDLLG 281

Query: 257 KCGEVERAELLFRDI-VRPDLISCNAMISGYTCNGKTESSLRLFRQLL 303
           + G ++ A  L R + ++P+ +   +++     +  T+   ++ +QLL
Sbjct: 282 RAGYLKEALELIRAMPMKPNSMVLGSLLRACQIHKDTKLGEQVTQQLL 329


>gi|34365551|gb|AAQ65087.1| At4g14850 [Arabidopsis thaliana]
          Length = 634

 Score =  425 bits (1093), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 243/635 (38%), Positives = 351/635 (55%), Gaps = 3/635 (0%)

Query: 152 LYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDST 211
           +Y K    +SAR V    P ++ V W S+ISGL +N  F  ++  F +M R G    D T
Sbjct: 1   MYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFT 60

Query: 212 SVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDI 271
              A   AVA ++    G +I  L +K G    V+V       Y K    + A  LF +I
Sbjct: 61  FPCA-FKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEI 119

Query: 272 VRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTN 331
              +L + NA IS    +G+   ++  F +        NS T    +     + HL+L  
Sbjct: 120 PERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGM 179

Query: 332 CIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNG 391
            +H   L+SG  ++ SV   L   Y +  ++ ++  +F E   K+  SW +++A Y QN 
Sbjct: 180 QLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNH 239

Query: 392 LTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVST 451
             E+A  L+   +   V  +   +SS+LSACA +  + LG+ +H        E  I+V +
Sbjct: 240 EDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGS 299

Query: 452 ALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRP 511
           AL+DMY KCG I ++ + FD M  K+ VT N++I GY   G    AL LF EM   G  P
Sbjct: 300 ALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGP 359

Query: 512 SG--VTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKAL 569
           +   +TF+S+L ACS AG V  G +IF SM   +G +P AEHY+C+VD+LGRAG +E+A 
Sbjct: 360 TPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAY 419

Query: 570 EFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAER 629
           EFIK + ++P  +VWGAL  AC +H    L  +A+E LF+LDP++ G HVLLSN ++A  
Sbjct: 420 EFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAG 479

Query: 630 DYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMR 689
            + +A TVR+ +K   + K  G + I V    H F + D+ H  +  I   L KL  +M 
Sbjct: 480 RWAEANTVREELKGVGIKKGAGYSWITVKNQVHAFQAKDRSHILNKEIQTTLAKLRNEME 539

Query: 690 EAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHT 749
            AG++ +   +L+D+EEEEK   +  HSEKLA+AFGL++      IRI KNLR+C DCH+
Sbjct: 540 AAGYKPDLKLSLYDLEEEEKAAEVSHHSEKLALAFGLLSLPLSVPIRITKNLRICGDCHS 599

Query: 750 ATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
             KF+S    R I+VRD NRFH FK G+CSC DYW
Sbjct: 600 FFKFVSGSVKREIIVRDNNRFHRFKDGICSCKDYW 634



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 113/437 (25%), Positives = 214/437 (48%), Gaps = 6/437 (1%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           AR +    P  ++  +  +I G + N    +++  +  +R+   + P++FT+     A +
Sbjct: 11  ARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRRE-GVVPNDFTFPCAFKAVA 69

Query: 120 ACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNS 179
           +      G  +H  A+  G   D+FVG +  D+Y K      ARK+FD++PE++   WN+
Sbjct: 70  SLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNA 129

Query: 180 MISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKL 239
            IS  + +   +++I  F +  R  G   +S +  A L A ++   L LGM++  L L+ 
Sbjct: 130 FISNSVTDGRPREAIEAFIEFRRIDGH-PNSITFCAFLNACSDWLHLNLGMQLHGLVLRS 188

Query: 240 GFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLF 299
           GF   V V  GL+ FY KC ++  +E++F ++   + +S  ++++ Y  N + E +  L+
Sbjct: 189 GFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLY 248

Query: 300 RQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRL 359
            +        +   I  ++        L L   IH+  +K+ +     V +AL  +Y + 
Sbjct: 249 LRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKC 308

Query: 360 NEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNP--VTVSS 417
             +E + + FDE  EK+L + N++I GY   G  + A++LF+EM      P P  +T  S
Sbjct: 309 GCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVS 368

Query: 418 ILSACAQLGAISLGKWVHELVKSR-NFESNIYVSTALIDMYAKCGNIVEARELFDLMSHK 476
           +LSAC++ GA+  G  + + ++S    E      + ++DM  + G +  A E    M  +
Sbjct: 369 LLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQ 428

Query: 477 SEVT-WNTMISGYGLHG 492
             ++ W  + +   +HG
Sbjct: 429 PTISVWGALQNACRMHG 445



 Score =  107 bits (266), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 87/375 (23%), Positives = 169/375 (45%), Gaps = 39/375 (10%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           AR LF  IP+ +L  +N  I     +  P+ +I  +   R+     P++ T+   L+A S
Sbjct: 112 ARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDG-HPNSITFCAFLNACS 170

Query: 120 ACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNS 179
                ++G+ LHG  + SG+ +D+ V   L+D Y K   ++S+  +F +M  K+ V W S
Sbjct: 171 DWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCS 230

Query: 180 MISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTS--VAAVLPAVAEVQELRLGMEIQCLGL 237
           +++  ++N   + +  ++   +R+    ++++   +++VL A A +  L LG  I    +
Sbjct: 231 LVAAYVQNHEDEKASVLY---LRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAV 287

Query: 238 KLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLR 297
           K      ++V + LV  Y KCG +E +E  F ++   +L++ N++I GY   G+ + +L 
Sbjct: 288 KACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALA 347

Query: 298 LFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNS-SVLTALSTVY 356
           LF ++             G  P +  F  L       S C ++G V N   +  ++ + Y
Sbjct: 348 LFEEMAPRG--------CGPTPNYMTFVSL------LSACSRAGAVENGMKIFDSMRSTY 393

Query: 357 SRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVS 416
                            E     ++ ++    + G+ E A    ++M    + P      
Sbjct: 394 ---------------GIEPGAEHYSCIVDMLGRAGMVERAYEFIKKM---PIQPTISVWG 435

Query: 417 SILSACAQLGAISLG 431
           ++ +AC   G   LG
Sbjct: 436 ALQNACRMHGKPQLG 450



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 67/273 (24%), Positives = 120/273 (43%), Gaps = 4/273 (1%)

Query: 27  QTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNE 86
           Q H  ++  GF  D+S    L       K    +  +F  +   +   +  ++  +  N 
Sbjct: 180 QLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNH 239

Query: 87  MPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVG 146
             + +   Y   RK+   T D F  S VLSA +      +G  +H HA+ +     +FVG
Sbjct: 240 EDEKASVLYLRSRKDIVETSD-FMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVG 298

Query: 147 AALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNG-G 205
           +ALVD+Y K   ++ + + FD+MPEK+ V  NS+I G         ++ +F +M   G G
Sbjct: 299 SALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCG 358

Query: 206 TWLDSTSVAAVLPAVAEVQELRLGMEI-QCLGLKLGFHDHVYVLTGLVSFYSKCGEVERA 264
              +  +  ++L A +    +  GM+I   +    G        + +V    + G VERA
Sbjct: 359 PTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERA 418

Query: 265 -ELLFRDIVRPDLISCNAMISGYTCNGKTESSL 296
            E + +  ++P +    A+ +    +GK +  L
Sbjct: 419 YEFIKKMPIQPTISVWGALQNACRMHGKPQLGL 451


>gi|326497609|dbj|BAK05894.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 676

 Score =  425 bits (1093), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 229/669 (34%), Positives = 372/669 (55%), Gaps = 6/669 (0%)

Query: 119 SACCDRSIGVLLHGHAIVSGYGS-DLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVL- 176
           S+C        LH   IVS   S    + + L   Y +   + +A       P   + + 
Sbjct: 11  SSCAALRTLTRLHALLIVSSSASCHHILSSCLATAYARAGDLAAAESTLATAPTSPSSIP 70

Query: 177 -WNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCL 235
            WN++++   +     +++ VF  +        DST+    L A A + +L  G  +   
Sbjct: 71  AWNALLAAHSRGASPHEALRVFRAL--PPAARPDSTTFTLALSACARLGDLATGEVVTDR 128

Query: 236 GLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESS 295
               G+ + ++V + +++ Y+KCG ++ A  +F  + + D ++ + M++G+   G+   +
Sbjct: 129 ASGAGYGNDIFVCSSVLNLYAKCGAMDDAVKVFDRMRKRDRVTWSTMVTGFVNAGQPVQA 188

Query: 296 LRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTV 355
           + ++ ++       +   IVG++      G   +   +H + L+  +  +  + T+L  +
Sbjct: 189 IEMYMRMRRDGLEADEVVIVGVMQACAATGDARMGASVHGYLLRHAMQMDVVISTSLVDM 248

Query: 356 YSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTV 415
           Y++    + AR++F+    ++  SW+A+I+   Q G  +EA+ LF+ MQ S + PN   V
Sbjct: 249 YAKNGLFDQARRVFELMPHRNDVSWSALISQLAQYGNADEALGLFRMMQVSGLHPNSGPV 308

Query: 416 SSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSH 475
              L AC+ LG + LGK +H  +  R  E +  V TA+IDMY+KCG++  A+ LFD +  
Sbjct: 309 VGALLACSDLGLLKLGKSIHGFIL-RTLELDRMVGTAVIDMYSKCGSLSSAQMLFDKVVS 367

Query: 476 KSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEI 535
           +  ++WN MI+  G HG G +AL LF EM  + +RP   TF S+L A SH+GLV EG   
Sbjct: 368 RDLISWNVMIACCGAHGRGRDALSLFQEMKRNEVRPDHATFASLLSALSHSGLVEEGKFW 427

Query: 536 FQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHK 595
           F  M++++G +P  +H  C+VD+L R+G +E+A   +  L  +P  ++  ALL  C+ + 
Sbjct: 428 FNCMVNEYGIEPGEKHLVCIVDLLARSGLVEEANGLVASLHSKPTISILVALLSGCLNNN 487

Query: 596 DTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLI 655
              L    +EK+ EL P +VG   L+SN+Y+A +++ +   VR+++K     KAPGC+ I
Sbjct: 488 KLELGESTAEKILELQPGDVGVLALVSNLYAAAKNWYKVREVRKLMKDHGSKKAPGCSSI 547

Query: 656 EVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKV 715
           E+ G  H F   DQ HPQ   I  M+ KL+ +MR+ G+  +T    HD+EE  KE ++  
Sbjct: 548 EIRGALHTFVMEDQSHPQHRQILQMVMKLDSEMRKMGYIPKTEFVYHDLEEGVKEQLLSR 607

Query: 716 HSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKG 775
           HSE+LA AFGL+ T PGT + +IKNLRVC DCH A K++SK+  R IVVRDA RFHHFK 
Sbjct: 608 HSERLATAFGLLNTSPGTRLVVIKNLRVCGDCHDAIKYMSKIADREIVVRDAKRFHHFKD 667

Query: 776 GVCSCGDYW 784
           G CSCGDYW
Sbjct: 668 GACSCGDYW 676



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 154/547 (28%), Positives = 262/547 (47%), Gaps = 31/547 (5%)

Query: 15  LLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFL 74
           LL        LT+ HA +I+       S+     H LS   AT YARA   +  +  L  
Sbjct: 9   LLSSCAALRTLTRLHALLIV-------SSSASCHHILSSCLATAYARAGDLAAAESTLAT 61

Query: 75  ----------FNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDR 124
                     +N ++   S    P  ++  +  L    A  PD+ T++  LSA +   D 
Sbjct: 62  APTSPSSIPAWNALLAAHSRGASPHEALRVFRAL--PPAARPDSTTFTLALSACARLGDL 119

Query: 125 SIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGL 184
           + G ++   A  +GYG+D+FV +++++LY K   +  A KVFD+M ++D V W++M++G 
Sbjct: 120 ATGEVVTDRASGAGYGNDIFVCSSVLNLYAKCGAMDDAVKVFDRMRKRDRVTWSTMVTGF 179

Query: 185 MKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDH 244
           +       +I ++  M R+ G   D   +  V+ A A   + R+G  +    L+      
Sbjct: 180 VNAGQPVQAIEMYMRMRRD-GLEADEVVIVGVMQACAATGDARMGASVHGYLLRHAMQMD 238

Query: 245 VYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLA 304
           V + T LV  Y+K G  ++A  +F  +   + +S +A+IS     G  + +L LFR +  
Sbjct: 239 VVISTSLVDMYAKNGLFDQARRVFELMPHRNDVSWSALISQLAQYGNADEALGLFRMMQV 298

Query: 305 SAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEA 364
           S    NS  +VG +      G L L   IH F L++ +  +  V TA+  +YS+   + +
Sbjct: 299 SGLHPNSGPVVGALLACSDLGLLKLGKSIHGFILRT-LELDRMVGTAVIDMYSKCGSLSS 357

Query: 365 ARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQ 424
           A+ LFD+   + L SWN MIA    +G   +A+SLFQEM+ ++V P+  T +S+LSA + 
Sbjct: 358 AQMLFDKVVSRDLISWNVMIACCGAHGRGRDALSLFQEMKRNEVRPDHATFASLLSALSH 417

Query: 425 LGAISLGK-WVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNT 483
            G +  GK W + +V     E        ++D+ A+ G + EA  L   +  K  ++   
Sbjct: 418 SGLVEEGKFWFNCMVNEYGIEPGEKHLVCIVDLLARSGLVEEANGLVASLHSKPTISILV 477

Query: 484 MISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSV---LYACSHAGL-VREGDEIFQSM 539
            +    L+ + LE  +  +E +   ++P  V  L++   LYA +     VRE     + +
Sbjct: 478 ALLSGCLNNNKLELGESTAEKILE-LQPGDVGVLALVSNLYAAAKNWYKVRE----VRKL 532

Query: 540 IHDHGFK 546
           + DHG K
Sbjct: 533 MKDHGSK 539


>gi|356570245|ref|XP_003553300.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g26782, mitochondrial-like [Glycine max]
          Length = 555

 Score =  425 bits (1093), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 221/528 (41%), Positives = 322/528 (60%), Gaps = 17/528 (3%)

Query: 267 LFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLL----ASAER-----VNSSTIVGL 317
           LF +I    ++S  ++I+G   N +   ++R+F++LL     S E      V+S  +  +
Sbjct: 35  LFDEIPDRSVVSWTSIIAGCVQNDRARDAVRVFKELLVEESGSVESEDGVFVDSVLLGCV 94

Query: 318 IPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSL 377
           +  F   G   +T  +H   +K G      V   L   Y++  EM  A K+FD  +E   
Sbjct: 95  VSAFSKLGWRGVTEGVHGLVIKRGFERCVGVGNTLMDAYAKFGEMGVA-KVFDGMNESDH 153

Query: 378 ASWNAMIAGYTQNGLTEEAISLFQEM-QASKVAPNPVTVSSILSACAQLGAISLGKWVHE 436
             WN++IA Y QNGL+ EA S+F +M ++     N V +   LS     GA+ LGK +H 
Sbjct: 154 YFWNSVIAEYAQNGLSAEAFSVFGDMVKSGNFRYNAVIMDXGLS-----GALQLGKCIHH 208

Query: 437 LVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLE 496
            V   + E +++V T+++D+Y KC  +  AR+ FD M  K+  +W  M++GYG+HG   E
Sbjct: 209 QVIKMDLEDSVFVGTSIVDIYCKCERVEMARKAFDCMKVKNVKSWTAMVAGYGMHGRAKE 268

Query: 497 ALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMV 556
           A+++F +M+ SG++P+ +TF+SVL ACSHAG+++EG   F  M  +   +P  EHY CMV
Sbjct: 269 AMEIFYKMIRSGVKPNYITFVSVLAACSHAGMLKEGXHWFNRMKCEFIVEPGIEHYLCMV 328

Query: 557 DILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVG 616
           D+LGRAG L      IK +  +P   +WG+LLGAC IHK+  L  +++ KLFELD  N G
Sbjct: 329 DLLGRAGYL-XCYGLIKEMNAKPDFIIWGSLLGACRIHKNVELGEISARKLFELDXSNCG 387

Query: 617 YHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTA 676
           Y+VLLSNIY+    + +   +R ++K R L KAPG +++E+ G  HV   GD+ HPQ   
Sbjct: 388 YYVLLSNIYADAGRWDEVERMRILMKSRGLLKAPGFSIVELKGRIHVLLVGDKEHPQHEK 447

Query: 677 IYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIR 736
           IY  L+K N K++E G+       LHDV+EEEK ++++VHSEKLA+AFG++ + PG+ I 
Sbjct: 448 IYEYLDKXNVKLQELGYMPNXNMVLHDVDEEEKGMVLRVHSEKLAVAFGIMNSVPGSIIH 507

Query: 737 IIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           IIKNLR+C DC+   K I KV  R IVVRD+ RFHHFK G CSCGDYW
Sbjct: 508 IIKNLRICGDCNVVIKLIFKVVNREIVVRDSKRFHHFKEGSCSCGDYW 555



 Score =  103 bits (256), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 111/428 (25%), Positives = 176/428 (41%), Gaps = 55/428 (12%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHL--------RKNTALTPDNFTY 111
           +R LF  IP   +  +  II G   N+  + ++  +  L             +  D+   
Sbjct: 32  SRHLFDEIPDRSVVSWTSIIAGCVQNDRARDAVRVFKELLVEESGSVESEDGVFVDSVLL 91

Query: 112 SFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPE 171
             V+SA S    R +   +HG  I  G+   + VG  L+D Y KF  +  A KVFD M E
Sbjct: 92  GCVVSAFSKLGWRGVTEGVHGLVIKRGFERCVGVGNTLMDAYAKFGEMGVA-KVFDGMNE 150

Query: 172 KDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGME 231
            D   WNS+I+   +N    ++  VFGDMV++G     +    AV+        L+LG  
Sbjct: 151 SDHYFWNSVIAEYAQNGLSAEAFSVFGDMVKSG-----NFRYNAVIMDXGLSGALQLGKC 205

Query: 232 IQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGK 291
           I    +K+   D V+V T +V  Y KC  VE A   F  +   ++ S  AM++GY  +G+
Sbjct: 206 IHHQVIKMDLEDSVFVGTSIVDIYCKCERVEMARKAFDCMKVKNVKSWTAMVAGYGMHGR 265

Query: 292 TESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTA 351
            + ++ +F +++ S  + N  T V +           L  C H+  LK G          
Sbjct: 266 AKEAMEIFYKMIRSGVKPNYITFVSV-----------LAACSHAGMLKEGX--------- 305

Query: 352 LSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPN 411
                   N M+    +     E  +  +  M+    + G       L +EM A    P+
Sbjct: 306 -----HWFNRMKCEFIV-----EPGIEHYLCMVDLLGRAGYL-XCYGLIKEMNAK---PD 351

Query: 412 PVTVSSILSACAQLGAISLGKWVHELVKSRNFE---SNIYVSTALIDMYAKCGNIVEARE 468
            +   S+L AC     + LG    E+   + FE   SN      L ++YA  G   E   
Sbjct: 352 FIIWGSLLGACRIHKNVELG----EISARKLFELDXSNCGYYVLLSNIYADAGRWDEVER 407

Query: 469 LFDLMSHK 476
           +  LM  +
Sbjct: 408 MRILMKSR 415



 Score = 89.0 bits (219), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 53/153 (34%), Positives = 84/153 (54%), Gaps = 10/153 (6%)

Query: 365 ARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEM----QASKVAPNPVTVSSILS 420
           +R LFDE  ++S+ SW ++IAG  QN    +A+ +F+E+      S  + + V V S+L 
Sbjct: 32  SRHLFDEIPDRSVVSWTSIIAGCVQNDRARDAVRVFKELLVEESGSVESEDGVFVDSVLL 91

Query: 421 AC-----AQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSH 475
            C     ++LG   + + VH LV  R FE  + V   L+D YAK G +  A+ +FD M+ 
Sbjct: 92  GCVVSAFSKLGWRGVTEGVHGLVIKRGFERCVGVGNTLMDAYAKFGEMGVAK-VFDGMNE 150

Query: 476 KSEVTWNTMISGYGLHGHGLEALQLFSEMLHSG 508
                WN++I+ Y  +G   EA  +F +M+ SG
Sbjct: 151 SDHYFWNSVIAEYAQNGLSAEAFSVFGDMVKSG 183



 Score = 62.4 bits (150), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 42/177 (23%), Positives = 81/177 (45%), Gaps = 6/177 (3%)

Query: 28  THAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNEM 87
            H  +I  GF+  +     L    + F     A+ +F  + + D + +N +I  ++ N +
Sbjct: 110 VHGLVIKRGFERCVGVGNTLMDAYAKFGEMGVAK-VFDGMNESDHYFWNSVIAEYAQNGL 168

Query: 88  PKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGA 147
              +   +  + K+      NF Y+ V+          +G  +H   I       +FVG 
Sbjct: 169 SAEAFSVFGDMVKSG-----NFRYNAVIMDXGLSGALQLGKCIHHQVIKMDLEDSVFVGT 223

Query: 148 ALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNG 204
           ++VD+Y K   V+ ARK FD M  K+   W +M++G   +   ++++ +F  M+R+G
Sbjct: 224 SIVDIYCKCERVEMARKAFDCMKVKNVKSWTAMVAGYGMHGRAKEAMEIFYKMIRSG 280


>gi|297797743|ref|XP_002866756.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312591|gb|EFH43015.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 649

 Score =  425 bits (1093), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 231/589 (39%), Positives = 335/589 (56%), Gaps = 35/589 (5%)

Query: 231 EIQCLGLKLGFHDHVYVLTGLVSF---YSKCGEVERAELLFRDIVRPDLISCNAMISGYT 287
           +I    LK G     Y +T  +S     +    +  A+++F    RPD    N MI G++
Sbjct: 61  QIHARMLKTGLIQDSYAITKFLSCCISSTSSDFLPYAQIVFDGFDRPDTFLWNLMIRGFS 120

Query: 288 CNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSS 347
           C+ + E SL L++++L  +   N+ T   L+        L  T  IH+   K G  ++  
Sbjct: 121 CSDEPERSLLLYQRMLCCSAPHNAYTFPSLLKACSNLSALEETTQIHAQITKLGYENDVY 180

Query: 348 VLTALSTVYS-------------------------------RLNEMEAARKLFDESSEKS 376
            + +L   Y+                               +  +M+ A  LF +  EK+
Sbjct: 181 AVNSLINSYAATGNFKLAHLLFDRIPKPDAVSWNSVIKGYAKAGKMDIALTLFRKMVEKN 240

Query: 377 LASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHE 436
             SW  MI+GY Q G+ +EA+ LF EMQ S V P+ V++++ LSACAQLGA+  GKW+H 
Sbjct: 241 AISWTTMISGYVQAGMHKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHS 300

Query: 437 LVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLE 496
            +       +  +   LIDMYAKCG++ EA E+F  +  KS   W  +ISGY  HGHG E
Sbjct: 301 YLTKTRIRMDSVLGCVLIDMYAKCGDMGEALEVFKNIQRKSVQAWTALISGYAYHGHGRE 360

Query: 497 ALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMV 556
           A+  F EM   GI+P+ +TF +VL ACS+ GLV EG  IF +M  D+  KP  EHY C+V
Sbjct: 361 AISKFMEMQKMGIKPNVITFTTVLTACSYTGLVEEGKLIFYNMERDYNLKPTIEHYGCVV 420

Query: 557 DILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVG 616
           D+L RAG L++A  FI+ + ++P   +WGALL AC IHK+  L     E L  +DP + G
Sbjct: 421 DLLSRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEIGEILIAIDPYHGG 480

Query: 617 YHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTA 676
            +V  +NI++  + + +AA  R+++K++ +AK PGC+ I + GT H F +GD+ HP+   
Sbjct: 481 RYVHKANIHAMGKKWDKAAETRRLMKEQGVAKVPGCSTISLEGTTHEFLAGDRSHPEIEK 540

Query: 677 IYAMLEKLNGKMREAGFQTE-TVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEI 735
           I +  + +  K+ E G+  E     L  V+++E+E ++  HSEKLAI +GLI T+PGT I
Sbjct: 541 IQSKWKIMRRKLEENGYVPELEDMLLDLVDDDERETIVHQHSEKLAITYGLIKTKPGTTI 600

Query: 736 RIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           RI+KNLRVC DCH  TK ISK+  R IV+RD  RFHHF+ G CSCGDYW
Sbjct: 601 RIMKNLRVCKDCHKVTKLISKIYKRDIVMRDRTRFHHFRDGKCSCGDYW 649



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 96/363 (26%), Positives = 171/363 (47%), Gaps = 34/363 (9%)

Query: 162 ARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVA 221
           A+ VFD     DT LWN MI G   +   + S+ ++  M+       ++ +  ++L A +
Sbjct: 97  AQIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCCSAP-HNAYTFPSLLKACS 155

Query: 222 EVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNA 281
            +  L    +I     KLG+ + VY +  L++ Y+  G  + A LLF  I +PD +S N+
Sbjct: 156 NLSALEETTQIHAQITKLGYENDVYAVNSLINSYAATGNFKLAHLLFDRIPKPDAVSWNS 215

Query: 282 MISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLI---------PVFYP--------- 323
           +I GY   GK + +L LFR+++       ++ I G +          +F+          
Sbjct: 216 VIKGYAKAGKMDIALTLFRKMVEKNAISWTTMISGYVQAGMHKEALQLFHEMQNSDVEPD 275

Query: 324 -------------FGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFD 370
                         G L     IHS+  K+ I  +S +   L  +Y++  +M  A ++F 
Sbjct: 276 NVSLANALSACAQLGALEQGKWIHSYLTKTRIRMDSVLGCVLIDMYAKCGDMGEALEVFK 335

Query: 371 ESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISL 430
               KS+ +W A+I+GY  +G   EAIS F EMQ   + PN +T +++L+AC+  G +  
Sbjct: 336 NIQRKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTTVLTACSYTGLVEE 395

Query: 431 GKWV-HELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHK-SEVTWNTMISGY 488
           GK + + + +  N +  I     ++D+ ++ G + EA+     M  K + V W  ++   
Sbjct: 396 GKLIFYNMERDYNLKPTIEHYGCVVDLLSRAGLLDEAKRFIQEMPLKPNAVIWGALLKAC 455

Query: 489 GLH 491
            +H
Sbjct: 456 RIH 458



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 123/492 (25%), Positives = 209/492 (42%), Gaps = 85/492 (17%)

Query: 22  QSQLTQTHAQIIIHGFQNDLSTVTK-----LAHRLSDFKATCYARALFFSIPKPDLFLFN 76
           Q +L Q HA+++  G   D   +TK     ++   SDF    YA+ +F    +PD FL+N
Sbjct: 56  QEELKQIHARMLKTGLIQDSYAITKFLSCCISSTSSDFLP--YAQIVFDGFDRPDTFLWN 113

Query: 77  VIIRGFSNNEMPKSSICFYTHLRKNTALTPDN-FTYSFVLSAASACCDRSIGVLLHGHAI 135
           ++IRGFS ++ P+ S+  Y  +   +A  P N +T+  +L A S          +H    
Sbjct: 114 LMIRGFSCSDEPERSLLLYQRMLCCSA--PHNAYTFPSLLKACSNLSALEETTQIHAQIT 171

Query: 136 VSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIW 195
             GY +D++   +L++ Y      K A  +FD++P+ D V WNS+I G  K      ++ 
Sbjct: 172 KLGYENDVYAVNSLINSYAATGNFKLAHLLFDRIPKPDAVSWNSVIKGYAKAGKMDIALT 231

Query: 196 VFGDMV-RNGGTWL-----------------------------DSTSVAAVLPAVAEVQE 225
           +F  MV +N  +W                              D+ S+A  L A A++  
Sbjct: 232 LFRKMVEKNAISWTTMISGYVQAGMHKEALQLFHEMQNSDVEPDNVSLANALSACAQLGA 291

Query: 226 LRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISG 285
           L  G  I     K        +   L+  Y+KCG++  A  +F++I R  + +  A+ISG
Sbjct: 292 LEQGKWIHSYLTKTRIRMDSVLGCVLIDMYAKCGDMGEALEVFKNIQRKSVQAWTALISG 351

Query: 286 YTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSN 345
           Y  +G    ++  F ++                                   +K  +++ 
Sbjct: 352 YAYHGHGREAISKFMEM-------------------------------QKMGIKPNVITF 380

Query: 346 SSVLTALSTVYSRLNEMEAARKLF-----DESSEKSLASWNAMIAGYTQNGLTEEAISLF 400
           ++VLTA S  Y+ L  +E  + +F     D + + ++  +  ++   ++ GL +EA    
Sbjct: 381 TTVLTACS--YTGL--VEEGKLIFYNMERDYNLKPTIEHYGCVVDLLSRAGLLDEAKRFI 436

Query: 401 QEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHE-LVKSRNFESNIYVSTALID-MYA 458
           QEM    + PN V   ++L AC     I LG+ + E L+    +    YV  A I  M  
Sbjct: 437 QEM---PLKPNAVIWGALLKACRIHKNIELGEEIGEILIAIDPYHGGRYVHKANIHAMGK 493

Query: 459 KCGNIVEARELF 470
           K     E R L 
Sbjct: 494 KWDKAAETRRLM 505



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 61/232 (26%), Positives = 99/232 (42%), Gaps = 33/232 (14%)

Query: 6   PQSRNLFLSLLKGAKTQSQL---TQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARA 62
           P +   F SLLK     S L   TQ HAQI   G++ND+  V  L +  +       A  
Sbjct: 141 PHNAYTFPSLLKACSNLSALEETTQIHAQITKLGYENDVYAVNSLINSYAATGNFKLAHL 200

Query: 63  LFFSIPKPDLFLFNVIIRGFSN------------NEMPKSSICFYT-------------- 96
           LF  IPKPD   +N +I+G++               + K++I + T              
Sbjct: 201 LFDRIPKPDAVSWNSVIKGYAKAGKMDIALTLFRKMVEKNAISWTTMISGYVQAGMHKEA 260

Query: 97  ----HLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDL 152
               H  +N+ + PDN + +  LSA +       G  +H +   +    D  +G  L+D+
Sbjct: 261 LQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLTKTRIRMDSVLGCVLIDM 320

Query: 153 YFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNG 204
           Y K   +  A +VF  +  K    W ++ISG   +   +++I  F +M + G
Sbjct: 321 YAKCGDMGEALEVFKNIQRKSVQAWTALISGYAYHGHGREAISKFMEMQKMG 372


>gi|296080932|emb|CBI18728.3| unnamed protein product [Vitis vinifera]
          Length = 607

 Score =  425 bits (1093), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 222/581 (38%), Positives = 345/581 (59%), Gaps = 7/581 (1%)

Query: 208 LDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELL 267
           LD   + ++L     + ++   + I    ++ G     +++  L+   SKC  ++ A  +
Sbjct: 30  LDQKQIISLLQRSKHINQV---LPIHAQLIRNGHSQDPFMVFELLRSCSKCHAIDYASRI 86

Query: 268 FRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHL 327
           F+    P++    A+I G+  +G    +++L+ ++L  +   ++  +  ++        L
Sbjct: 87  FQYTHNPNVYLYTALIDGFVSSGNYFDAIQLYSRMLHDSILPDNYLMASILKACGSQLAL 146

Query: 328 HLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLAS----WNAM 383
                +HS  LK G+ SN  V   +  +Y +  E+  AR++F+E  E  +A     W AM
Sbjct: 147 REGREVHSRALKLGLSSNRLVRLRIMELYGKCGELGDARRVFEEMPEDVVAKDTVCWTAM 206

Query: 384 IAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNF 443
           I G+ +N     A+  F+ MQ   V PN  T+  +LSAC+QLGA+ +G+WVH  ++    
Sbjct: 207 IDGFVRNEEMNRALEAFRGMQGENVRPNEFTIVCVLSACSQLGALEIGRWVHSYMRKFEI 266

Query: 444 ESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSE 503
           E N++V  ALI+MY++CG+I EA+ +FD M  +  +T+NTMISG  ++G   +A++LF  
Sbjct: 267 ELNLFVGNALINMYSRCGSIDEAQTVFDEMKDRDVITYNTMISGLSMNGKSRQAIELFRV 326

Query: 504 MLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAG 563
           M+   +RP+ VTF+ VL ACSH GLV  G +IF SM  D+G +P  EHY CMVD+LGR G
Sbjct: 327 MIGRRLRPTNVTFVGVLNACSHGGLVDFGFKIFHSMTRDYGVEPQIEHYGCMVDLLGRVG 386

Query: 564 QLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSN 623
           +LE+A + I+ + + P   + G LL AC +HK+  L    ++ L +    + G +VLLS+
Sbjct: 387 RLEEAYDLIRTMKMTPDHIMLGTLLSACKMHKNLELGEQVAKVLEDRGQADSGTYVLLSH 446

Query: 624 IYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEK 683
           +Y++   + +AA VR  +K+  + K PGC+ IEV    H F  GD  HP+   IY  LE+
Sbjct: 447 VYASSGKWKEAAQVRAKMKEAGMQKEPGCSSIEVNNEIHEFLLGDLRHPRKERIYEKLEE 506

Query: 684 LNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRV 743
           LN  +R  G+  E    L D+E+ EKE  + +HSE+LAI +GLI+TEP T IR++KNLRV
Sbjct: 507 LNRLLRLEGYHPEKEVVLQDIEDGEKEWALAIHSERLAICYGLISTEPCTVIRVMKNLRV 566

Query: 744 CLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           C DCH+A K I+K+T R +VVRD NRFH+F+ G CSCGDYW
Sbjct: 567 CYDCHSAIKLIAKITRRKVVVRDRNRFHYFENGACSCGDYW 607



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 123/473 (26%), Positives = 224/473 (47%), Gaps = 43/473 (9%)

Query: 2   SMKTPQSRNLFLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYAR 61
           S+K+   + + +SLL+ +K  +Q+   HAQ+I +G   D   V +L    S   A  YA 
Sbjct: 26  SLKSLDQKQI-ISLLQRSKHINQVLPIHAQLIRNGHSQDPFMVFELLRSCSKCHAIDYAS 84

Query: 62  ALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASAC 121
            +F     P+++L+  +I GF ++     +I  Y+ +  ++ L PDN+  + +L A  + 
Sbjct: 85  RIFQYTHNPNVYLYTALIDGFVSSGNYFDAIQLYSRMLHDSIL-PDNYLMASILKACGSQ 143

Query: 122 CDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPE----KDTVLW 177
                G  +H  A+  G  S+  V   +++LY K   +  AR+VF++MPE    KDTV W
Sbjct: 144 LALREGREVHSRALKLGLSSNRLVRLRIMELYGKCGELGDARRVFEEMPEDVVAKDTVCW 203

Query: 178 NSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGL 237
            +MI G ++N     ++  F  M +      +  ++  VL A +++  L +G  +     
Sbjct: 204 TAMIDGFVRNEEMNRALEAFRGM-QGENVRPNEFTIVCVLSACSQLGALEIGRWVHSYMR 262

Query: 238 KLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLR 297
           K     +++V   L++ YS+CG ++ A+ +F ++   D+I+ N MISG + NGK+  ++ 
Sbjct: 263 KFEIELNLFVGNALINMYSRCGSIDEAQTVFDEMKDRDVITYNTMISGLSMNGKSRQAIE 322

Query: 298 LFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYS 357
           LFR ++    R  + T VG+           L  C H   +  G      +  +++  Y 
Sbjct: 323 LFRVMIGRRLRPTNVTFVGV-----------LNACSHGGLVDFGF----KIFHSMTRDY- 366

Query: 358 RLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSS 417
                           E  +  +  M+    + G  EEA  L + M   K+ P+ + + +
Sbjct: 367 --------------GVEPQIEHYGCMVDLLGRVGRLEEAYDLIRTM---KMTPDHIMLGT 409

Query: 418 ILSACAQLGAISLGKWVHELVKSR-NFESNIYVSTALIDMYAKCGNIVEAREL 469
           +LSAC     + LG+ V ++++ R   +S  YV   L  +YA  G   EA ++
Sbjct: 410 LLSACKMHKNLELGEQVAKVLEDRGQADSGTYV--LLSHVYASSGKWKEAAQV 460


>gi|357147965|ref|XP_003574566.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Brachypodium distachyon]
          Length = 923

 Score =  425 bits (1092), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 245/760 (32%), Positives = 406/760 (53%), Gaps = 4/760 (0%)

Query: 27  QTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNE 86
           Q  + +I+ G Q  +S    L   L +      A  LF+ + + D   +N ++  +S+  
Sbjct: 166 QVFSHVIVSGLQRQVSVANSLISMLGNLGRVHDAEKLFYRMEERDTVSWNALVSMYSHEG 225

Query: 87  MPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVG 146
           +   S   ++ +R+   L  D  T   ++S  ++    S G  +H   + +G  S + V 
Sbjct: 226 LCSKSFRVFSDMRRGGLLRHDATTLCSLISVCASSDYVSYGSGVHSLCLRTGLHSYIPVV 285

Query: 147 AALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVR-NGG 205
            ALV++Y     +  A  +F  M  +D + WN+MIS  ++N    D++   G ++  N G
Sbjct: 286 NALVNMYSSAGKLADAEFLFWNMSRRDLISWNTMISSYVQNGNNMDALKTLGQLLHTNEG 345

Query: 206 TWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAE 265
              D  + ++ L A +    L  G  +  + L+L  H ++ V   L++ Y KC  +E AE
Sbjct: 346 P--DRMTFSSALGACSSPGALMDGRMVHAMTLQLSLHHNLLVGNSLITMYGKCNSIEDAE 403

Query: 266 LLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFG 325
            +F+ +   D++SCN +I  Y        ++++F  +     ++N  TIV ++  F    
Sbjct: 404 RIFQLMPNHDVVSCNILIGSYAVLEDGTKAMQVFFWMRRGEVKLNYITIVNILGSFTSSN 463

Query: 326 HLHLTNC-IHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMI 384
            L      +H++ + +G +S+  V  +L T+Y++  ++E++  +F     +S+ SWNAMI
Sbjct: 464 DLRNYGLPLHAYTIHAGFLSDDYVSNSLITMYAKCGDLESSNNVFQRIINRSVVSWNAMI 523

Query: 385 AGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFE 444
           A   Q+G  EE++ LF +M+      + + ++  +S+ A L ++  G  +H L       
Sbjct: 524 AANVQHGHGEESLKLFMDMRHDGNGLDHICLAECMSSSASLASLEEGMQLHGLGLKCGLG 583

Query: 445 SNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEM 504
           ++ +V  A +DMY KCG + E  ++    + + +  WNT+ISGY  +G+  EA + F  M
Sbjct: 584 NDSHVVNAAMDMYGKCGKMDEMLKMLPDPAIRPQQCWNTLISGYARYGYFKEAEETFKHM 643

Query: 505 LHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQ 564
           +  G  P  VTF+++L ACSHAGLV +G + + SM    G  P  +H  C+VDILGR G+
Sbjct: 644 ISVGRTPDYVTFVTLLSACSHAGLVDKGIDYYNSMSSVFGVSPGIKHCVCIVDILGRLGR 703

Query: 565 LEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNI 624
             +A +FI+ + V P   +W +LL +   HK+ ++ R A+++L ELDP +   +VLLSN+
Sbjct: 704 FAEAEKFIEDMPVLPNDLIWRSLLSSSRTHKNLDIGRKAAKRLLELDPFDDSAYVLLSNL 763

Query: 625 YSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKL 684
           Y+    +     VR  +K   L K P C+ ++       F  GD  H  +  IY  L+++
Sbjct: 764 YATSARWSDVDRVRSHMKTINLNKIPACSWLKQKKEVSTFGIGDHSHKHADKIYMKLDEI 823

Query: 685 NGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVC 744
             K+RE G+  +T +ALHD +EE+KE  +  HSEKLA+A+GLI    G  +RI KNLRVC
Sbjct: 824 LLKLREVGYVADTSSALHDTDEEQKEQNLWNHSEKLALAYGLITVPEGCTVRIFKNLRVC 883

Query: 745 LDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
            DCH   K +S V  R IV+RD  RFHHFKGG CSC D+W
Sbjct: 884 ADCHLVFKLVSMVFDREIVLRDPYRFHHFKGGSCSCSDFW 923



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 154/565 (27%), Positives = 268/565 (47%), Gaps = 12/565 (2%)

Query: 29  HAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNEMP 88
           HA     G   ++   T L H     K    A+ LF+ +P+ ++  +  ++   S+N   
Sbjct: 67  HALTQKAGLMVNVYIGTALLHLYGSQKHVLDAQRLFWEMPERNVVSWTALMVALSSNGHL 126

Query: 89  KSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAA 148
           + ++ +Y  +R+       N  ++ V+S   +  D   G+ +  H IVSG    + V  +
Sbjct: 127 EEALGYYRRMRRERIACNAN-AFATVVSLCGSLEDEVAGLQVFSHVIVSGLQRQVSVANS 185

Query: 149 LVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWL 208
           L+ +      V  A K+F +M E+DTV WN+++S          S  VF DM R G    
Sbjct: 186 LISMLGNLGRVHDAEKLFYRMEERDTVSWNALVSMYSHEGLCSKSFRVFSDMRRGGLLRH 245

Query: 209 DSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLF 268
           D+T++ +++   A    +  G  +  L L+ G H ++ V+  LV+ YS  G++  AE LF
Sbjct: 246 DATTLCSLISVCASSDYVSYGSGVHSLCLRTGLHSYIPVVNALVNMYSSAGKLADAEFLF 305

Query: 269 RDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLH 328
            ++ R DLIS N MIS Y  NG    +L+   QLL + E  +  T    +      G L 
Sbjct: 306 WNMSRRDLISWNTMISSYVQNGNNMDALKTLGQLLHTNEGPDRMTFSSALGACSSPGALM 365

Query: 329 LTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYT 388
               +H+  L+  +  N  V  +L T+Y + N +E A ++F       + S N +I  Y 
Sbjct: 366 DGRMVHAMTLQLSLHHNLLVGNSLITMYGKCNSIEDAERIFQLMPNHDVVSCNILIGSYA 425

Query: 389 QNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAI-SLGKWVHELVKSRNFESNI 447
                 +A+ +F  M+  +V  N +T+ +IL +      + + G  +H       F S+ 
Sbjct: 426 VLEDGTKAMQVFFWMRRGEVKLNYITIVNILGSFTSSNDLRNYGLPLHAYTIHAGFLSDD 485

Query: 448 YVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHS 507
           YVS +LI MYAKCG++  +  +F  + ++S V+WN MI+    HGHG E+L+LF +M H 
Sbjct: 486 YVSNSLITMYAKCGDLESSNNVFQRIINRSVVSWNAMIAANVQHGHGEESLKLFMDMRHD 545

Query: 508 GIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMV----DILGRAG 563
           G     +     + + +    + EG +     +H  G K    + + +V    D+ G+ G
Sbjct: 546 GNGLDHICLAECMSSSASLASLEEGMQ-----LHGLGLKCGLGNDSHVVNAAMDMYGKCG 600

Query: 564 QLEKALEFIKGLAVEPGPAVWGALL 588
           ++++ L+ +   A+ P    W  L+
Sbjct: 601 KMDEMLKMLPDPAIRP-QQCWNTLI 624



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 130/491 (26%), Positives = 240/491 (48%), Gaps = 14/491 (2%)

Query: 113 FVLSAASACCDR-----SIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFD 167
           F L++    C+R     + G  +H     +G   ++++G AL+ LY     V  A+++F 
Sbjct: 44  FALASLVTACERWEEGRACGAAIHALTQKAGLMVNVYIGTALLHLYGSQKHVLDAQRLFW 103

Query: 168 KMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELR 227
           +MPE++ V W +++  L  N   ++++  +  M R      ++ + A V+     +++  
Sbjct: 104 EMPERNVVSWTALMVALSSNGHLEEALGYYRRM-RRERIACNANAFATVVSLCGSLEDEV 162

Query: 228 LGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYT 287
            G+++    +  G    V V   L+S     G V  AE LF  +   D +S NA++S Y+
Sbjct: 163 AGLQVFSHVIVSGLQRQVSVANSLISMLGNLGRVHDAEKLFYRMEERDTVSWNALVSMYS 222

Query: 288 CNGKTESSLRLFRQLLASA-ERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNS 346
             G    S R+F  +      R +++T+  LI V     ++   + +HS CL++G+ S  
Sbjct: 223 HEGLCSKSFRVFSDMRRGGLLRHDATTLCSLISVCASSDYVSYGSGVHSLCLRTGLHSYI 282

Query: 347 SVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQAS 406
            V+ AL  +YS   ++  A  LF   S + L SWN MI+ Y QNG   +A+    ++  +
Sbjct: 283 PVVNALVNMYSSAGKLADAEFLFWNMSRRDLISWNTMISSYVQNGNNMDALKTLGQLLHT 342

Query: 407 KVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEA 466
              P+ +T SS L AC+  GA+  G+ VH +    +   N+ V  +LI MY KC +I +A
Sbjct: 343 NEGPDRMTFSSALGACSSPGALMDGRMVHAMTLQLSLHHNLLVGNSLITMYGKCNSIEDA 402

Query: 467 RELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHA 526
             +F LM +   V+ N +I  Y +   G +A+Q+F  M    ++ + +T +++L + + +
Sbjct: 403 ERIFQLMPNHDVVSCNILIGSYAVLEDGTKAMQVFFWMRRGEVKLNYITIVNILGSFTSS 462

Query: 527 GLVRE-GDEIFQSMIHDHGFKPLAEHYA--CMVDILGRAGQLEKALEFIKGLAVEPGPAV 583
             +R  G  +    IH  GF  L++ Y    ++ +  + G LE +    + + +      
Sbjct: 463 NDLRNYGLPLHAYTIHA-GF--LSDDYVSNSLITMYAKCGDLESSNNVFQRI-INRSVVS 518

Query: 584 WGALLGACMIH 594
           W A++ A + H
Sbjct: 519 WNAMIAANVQH 529



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 49/215 (22%), Positives = 98/215 (45%), Gaps = 3/215 (1%)

Query: 375 KSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLG-AISLGKW 433
           ++ +SW   I+G  + G    A S+ + M+   V  +   ++S+++AC +     + G  
Sbjct: 6   RTPSSWYTAISGCVRCGRDSTAFSMLRGMRERGVPLSGFALASLVTACERWEEGRACGAA 65

Query: 434 VHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGH 493
           +H L +      N+Y+ TAL+ +Y    ++++A+ LF  M  ++ V+W  ++     +GH
Sbjct: 66  IHALTQKAGLMVNVYIGTALLHLYGSQKHVLDAQRLFWEMPERNVVSWTALMVALSSNGH 125

Query: 494 GLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYA 553
             EAL  +  M    I  +   F +V+  C        G ++F  +I   G +       
Sbjct: 126 LEEALGYYRRMRRERIACNANAFATVVSLCGSLEDEVAGLQVFSHVIVS-GLQRQVSVAN 184

Query: 554 CMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALL 588
            ++ +LG  G++  A +    +  E     W AL+
Sbjct: 185 SLISMLGNLGRVHDAEKLFYRME-ERDTVSWNALV 218


>gi|302812982|ref|XP_002988177.1| hypothetical protein SELMODRAFT_127579 [Selaginella moellendorffii]
 gi|300143909|gb|EFJ10596.1| hypothetical protein SELMODRAFT_127579 [Selaginella moellendorffii]
          Length = 742

 Score =  425 bits (1092), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 251/746 (33%), Positives = 405/746 (54%), Gaps = 35/746 (4%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           A+A F ++ + +L+ +  ++  F+ +   K ++     +R++  + PD  T+   ++A  
Sbjct: 11  AKAAFDALEQRNLYSWTGLVAAFAISGQSKETLRALERMRQD-GVRPDAVTF---ITALG 66

Query: 120 ACCDRSI---GVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVL 176
           +C D      G+ +H   + S    D  V  AL+++Y K   +  A++VF KM     V+
Sbjct: 67  SCGDPESLRDGIRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKMERTRNVI 126

Query: 177 WNSMISGLMKNCCFQDSIWVFGDMVRNG------GTWLDSTSVAAVLPAVAEVQELRLGM 230
             S+++G         ++W   + +R+       G     +++  +L A +    ++ G 
Sbjct: 127 SWSIMAGAH---ALHGNVW---EALRHFRFMLLLGIKATKSAMVTILSACSSPALVQDGR 180

Query: 231 EIQ-CLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFR--DIVRPDLISCNAMISGYT 287
            I  C+ L  GF   + V   +++ Y +CG VE A  +F   D    D++S N M+S Y 
Sbjct: 181 MIHSCIALS-GFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSTYV 239

Query: 288 CNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSS 347
            N + + +++L++++    ++V   T V L+        + L   +H   +   +  N  
Sbjct: 240 HNDRGKDAIQLYQRMQLRPDKV---TYVSLLSACSSAEDVGLGRVLHKQIVNDELEKNVI 296

Query: 348 VLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEM---- 403
           V  AL ++Y++      AR +FD+  ++S+ SW  +I+ Y +  L  EA  LFQ+M    
Sbjct: 297 VGNALVSMYAKCGSHTEARAVFDKMEQRSIISWTTIISAYVRRRLVAEACHLFQQMLELE 356

Query: 404 ---QASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKC 460
               + +V P+ +   +IL+ACA + A+  GK V E   S    S+  V TA++++Y KC
Sbjct: 357 KNGSSQRVKPDALAFVTILNACADVSALEQGKMVSEQAASCGLSSDKAVGTAVVNLYGKC 416

Query: 461 GNIVEARELFDLMSHKSEVT-WNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSV 519
           G I EAR +FD +  + +V  WN MI+ Y   G   EAL+LF  M   G+RP   +F+S+
Sbjct: 417 GEIEEARRIFDAVCSRPDVQLWNAMIAVYAQFGQSHEALKLFWRMEMEGVRPDSFSFVSI 476

Query: 520 LYACSHAGLVREGDEIFQSMIHDH-GFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVE 578
           L ACSH GL  +G   F SM  ++       +H+ C+ D+LGR G+L++A EF++ L V+
Sbjct: 477 LLACSHTGLEDQGKSYFTSMTTEYRNVTRTIQHFGCVADLLGRGGRLKEAEEFLEKLPVK 536

Query: 579 PGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVR 638
           P    W +LL AC  H+D   A+  + KL  L+P     +V LSNIY+  + +   A VR
Sbjct: 537 PDAVAWTSLLAACRNHRDLKRAKEVANKLLRLEPRCATGYVALSNIYAELQKWHAVAKVR 596

Query: 639 QVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETV 698
           + + ++ + K  G + IE+G   H F +GD  HP++  I   L KL+ +M+E G+  +T 
Sbjct: 597 KFMAEQGVKKERGVSTIEIGKYMHDFATGDDAHPRNREIREELAKLHSQMKECGYVPDTK 656

Query: 699 TALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVT 758
             LH V+E+EKE ++  HSE+LAIA GLI+T  GT +R+ KNLRVC DCHTATK ISK+ 
Sbjct: 657 MVLHFVDEQEKERLLFSHSERLAIALGLISTPLGTPLRVTKNLRVCSDCHTATKLISKIA 716

Query: 759 GRVIVVRDANRFHHFKGGVCSCGDYW 784
           GR IVVRD  RFH FK G CSC DYW
Sbjct: 717 GRKIVVRDPTRFHLFKDGKCSCQDYW 742



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 78/288 (27%), Positives = 143/288 (49%), Gaps = 2/288 (0%)

Query: 355 VYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVT 414
           +Y+  +    A+  FD   +++L SW  ++A +  +G ++E +   + M+   V P+ VT
Sbjct: 1   MYAHCDSPGDAKAAFDALEQRNLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVT 60

Query: 415 VSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMS 474
             + L +C    ++  G  +H++V     E +  VS AL++MY KCG++  A+ +F  M 
Sbjct: 61  FITALGSCGDPESLRDGIRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKME 120

Query: 475 H-KSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGD 533
             ++ ++W+ M   + LHG+  EAL+ F  ML  GI+ +    +++L ACS   LV++G 
Sbjct: 121 RTRNVISWSIMAGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPALVQDG- 179

Query: 534 EIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMI 593
            +  S I   GF+        ++ + GR G +E+A +    +       V   ++ +  +
Sbjct: 180 RMIHSCIALSGFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSTYV 239

Query: 594 HKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVV 641
           H D     +   +  +L P+ V Y  LLS   SAE   L     +Q+V
Sbjct: 240 HNDRGKDAIQLYQRMQLRPDKVTYVSLLSACSSAEDVGLGRVLHKQIV 287


>gi|296087881|emb|CBI35164.3| unnamed protein product [Vitis vinifera]
          Length = 663

 Score =  425 bits (1092), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 205/446 (45%), Positives = 287/446 (64%), Gaps = 22/446 (4%)

Query: 338 LKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAI 397
           ++  +VS     TAL  +Y++   +  AR+LF+  ++K++ SW AMIAG  ++   EE  
Sbjct: 221 MERDVVSWIPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEGT 280

Query: 398 SLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMY 457
            LF  MQ   + PN +T                      ++     E +  ++TAL+DMY
Sbjct: 281 KLFIRMQEENIFPNEIT----------------------MLNKERVEVDCILNTALVDMY 318

Query: 458 AKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFL 517
           AKCG+I  A  LF     +    WN +I+G+ +HG+G EAL +F+EM   G++P+ +TF+
Sbjct: 319 AKCGDINAAGRLFIEAISRDICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDITFI 378

Query: 518 SVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAV 577
            +L+ACSHAGLV EG ++F+ M+H  G  P  EHY CMVD+LGRAG L++A E IK + +
Sbjct: 379 GLLHACSHAGLVTEGKKLFEKMVHTFGLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPI 438

Query: 578 EPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATV 637
           +P   VWGAL+ AC +HK+  L  +A+ +L E++PEN GY+VL+SNIY+A   +  AA V
Sbjct: 439 KPNTIVWGALVAACRLHKNPQLGELAATQLLEIEPENCGYNVLMSNIYAAANRWSDAAGV 498

Query: 638 RQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTET 697
           R+ +K   + K PG ++IEV GT H F  GDQ HPQ   I  ML ++  K+ EAG+  +T
Sbjct: 499 RKTMKTVGMKKEPGHSVIEVNGTVHEFLMGDQSHPQIRRINEMLAEMRRKLNEAGYVPDT 558

Query: 698 VTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKV 757
            T L +++EEEKE  +  HSEKLA+AFGLI+T P T IRI+KNLRVC DCH ATK +SK+
Sbjct: 559 STVLLNIDEEEKETALTYHSEKLAMAFGLISTAPSTPIRIVKNLRVCNDCHAATKLLSKI 618

Query: 758 TGRVIVVRDANRFHHFKGGVCSCGDY 783
            GRVI+VRD NRFHHF+ G CSCGDY
Sbjct: 619 YGRVIIVRDRNRFHHFREGYCSCGDY 644



 Score =  109 bits (273), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 85/330 (25%), Positives = 153/330 (46%), Gaps = 16/330 (4%)

Query: 177 WNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLG 236
           WN +I+   K    ++++ V+  + R     +D+    +VL A  +V   +LG EI    
Sbjct: 127 WNFVITSYTKRNQPRNALNVYAQL-RKMDFEVDNFMAPSVLKACGQVSWTQLGKEIHGFV 185

Query: 237 LKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLIS----CNAMISGYTCNGKT 292
           LK G    V+V   L+  Y +C  VE A L+F  ++  D++S      A++  Y   G  
Sbjct: 186 LKKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMERDVVSWIPTTTALLDMYAKCGHL 245

Query: 293 ESSLRLFRQLLASAERVNSSTIVGLI---------PVFYPFGHLHLTNCIHSFCLKSGIV 343
             + +LF  L        ++ I G I          +F      ++     +   K  + 
Sbjct: 246 GLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEGTKLFIRMQEENIFPNEITMLNKERVE 305

Query: 344 SNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEM 403
            +  + TAL  +Y++  ++ AA +LF E+  + +  WNA+I G+  +G  EEA+ +F EM
Sbjct: 306 VDCILNTALVDMYAKCGDINAAGRLFIEAISRDICMWNAIITGFAMHGYGEEALDIFAEM 365

Query: 404 QASKVAPNPVTVSSILSACAQLGAISLGKWVHE-LVKSRNFESNIYVSTALIDMYAKCGN 462
           +   V PN +T   +L AC+  G ++ GK + E +V +      I     ++D+  + G 
Sbjct: 366 ERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTFGLVPQIEHYGCMVDLLGRAGL 425

Query: 463 IVEARELFDLMSHK-SEVTWNTMISGYGLH 491
           + EA E+   M  K + + W  +++   LH
Sbjct: 426 LDEAHEMIKSMPIKPNTIVWGALVAACRLH 455



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 103/435 (23%), Positives = 177/435 (40%), Gaps = 86/435 (19%)

Query: 21  TQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIR 80
           T  Q  Q HA II   F + L         L+DF +     A +           N +I 
Sbjct: 90  TLEQTKQIHAHIIKTHFHHALQIP------LNDFPSGLSPSAQW-----------NFVIT 132

Query: 81  GFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYG 140
            ++    P++++  Y  LRK      DNF    VL A        +G  +HG  +  G  
Sbjct: 133 SYTKRNQPRNALNVYAQLRK-MDFEVDNFMAPSVLKACGQVSWTQLGKEIHGFVLKKGLD 191

Query: 141 SDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDM 200
            D+FVG AL+ +Y + + V+ AR VFDKM E+D V W    + L+        + +   +
Sbjct: 192 RDVFVGNALMLMYGECACVEYARLVFDKMMERDVVSWIPTTTALLDMYAKCGHLGLARQL 251

Query: 201 VRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLG----FHDHVYVL-------- 248
             NG T     S  A++        L  G +   L +++     F + + +L        
Sbjct: 252 F-NGLTQKTVVSWTAMIAGCIRSNRLEEGTK---LFIRMQEENIFPNEITMLNKERVEVD 307

Query: 249 ----TGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLA 304
               T LV  Y+KCG++  A  LF + +  D+   NA+I+G+  +G  E +L +F ++  
Sbjct: 308 CILNTALVDMYAKCGDINAAGRLFIEAISRDICMWNAIITGFAMHGYGEEALDIFAEMER 367

Query: 305 SAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEA 364
              + N  T +GL               +H+ C  +G+V+                    
Sbjct: 368 QGVKPNDITFIGL---------------LHA-CSHAGLVTE------------------- 392

Query: 365 ARKLFDESSE-----KSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSIL 419
            +KLF++          +  +  M+    + GL +EA  + + M    + PN +   +++
Sbjct: 393 GKKLFEKMVHTFGLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSM---PIKPNTIVWGALV 449

Query: 420 SAC-----AQLGAIS 429
           +AC      QLG ++
Sbjct: 450 AACRLHKNPQLGELA 464



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 44/172 (25%), Positives = 84/172 (48%), Gaps = 8/172 (4%)

Query: 378 ASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHEL 437
           A WN +I  YT+      A++++ +++      +     S+L AC Q+    LGK +H  
Sbjct: 125 AQWNFVITSYTKRNQPRNALNVYAQLRKMDFEVDNFMAPSVLKACGQVSWTQLGKEIHGF 184

Query: 438 VKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTW----NTMISGYGLHGH 493
           V  +  + +++V  AL+ MY +C  +  AR +FD M  +  V+W      ++  Y   GH
Sbjct: 185 VLKKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMERDVVSWIPTTTALLDMYAKCGH 244

Query: 494 GLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGF 545
              A QLF+ +    +    V++ +++  C  +  + EG ++F  M  ++ F
Sbjct: 245 LGLARQLFNGLTQKTV----VSWTAMIAGCIRSNRLEEGTKLFIRMQEENIF 292


>gi|449480326|ref|XP_004155862.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g03580-like [Cucumis sativus]
          Length = 939

 Score =  425 bits (1092), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 242/713 (33%), Positives = 386/713 (54%), Gaps = 4/713 (0%)

Query: 29  HAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNEMP 88
           H   +  GF++DL     L    S F     AR +F  +   D   +N +I G+ +N   
Sbjct: 144 HEHAMEMGFESDLYIGNALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCSNGFW 203

Query: 89  KSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAA 148
           + ++  Y H  + T + PD FT S VL A  +      GV +HG     G   D+ +G  
Sbjct: 204 EDALDMY-HKFRMTGMVPDCFTMSSVLLACGSLMAVKEGVAVHGVIEKIGIAGDVIIGNG 262

Query: 149 LVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWL 208
           L+ +YFKF  ++ AR+VF KM  KD+V WN+MI G  +    + S+ +F DM+   G   
Sbjct: 263 LLSMYFKFERLREARRVFSKMAVKDSVTWNTMICGYAQLGRHEASVKLFMDMI--DGFVP 320

Query: 209 DSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLF 268
           D  S+ + + A  +  +L++G  +    +  GF         L+  Y+KCG++  A+ +F
Sbjct: 321 DMLSITSTIRACGQSGDLQVGKFVHKYLIGSGFECDTVACNILIDMYAKCGDLLAAQEVF 380

Query: 269 RDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLH 328
                 D ++ N++I+GYT +G  +  L  F+ ++    + +S T V L+ +F     ++
Sbjct: 381 DTTKCKDSVTWNSLINGYTQSGYYKEGLESFK-MMKMERKPDSVTFVLLLSIFSQLADIN 439

Query: 329 LTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYT 388
               IH   +K G  +   +  +L  VY++  EM+   K+F   S   + SWN +IA   
Sbjct: 440 QGRGIHCDVIKFGFEAELIIGNSLLDVYAKCGEMDDLLKVFSYMSAHDIISWNTVIASSV 499

Query: 389 QNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIY 448
                     +  EM+   + P+  TV  IL  C+ L     GK +H  +    FESN+ 
Sbjct: 500 HFDDCTVGFQMINEMRTEGLMPDEATVLGILPMCSLLAVRRQGKEIHGYIFKSGFESNVP 559

Query: 449 VSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSG 508
           +  ALI+MY+KCG++    ++F  M  K  VTW  +IS +G++G G +AL+ F +M  SG
Sbjct: 560 IGNALIEMYSKCGSLENCIKVFKYMKEKDVVTWTALISAFGMYGEGKKALKAFQDMELSG 619

Query: 509 IRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKA 568
           + P  V F++ ++ACSH+G+V+EG   F  M  D+  +P  EHYAC+VD+L R+G L +A
Sbjct: 620 VLPDSVAFIAFIFACSHSGMVKEGLRFFDRMKTDYNLEPRMEHYACVVDLLARSGLLAQA 679

Query: 569 LEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAE 628
            EFI  + ++P  ++WGALL AC    +TN+A+  S+K+ EL+ ++ GY+VL+SNIY+  
Sbjct: 680 EEFILSMPMKPDASLWGALLSACRARGNTNIAQRVSKKILELNSDDTGYYVLVSNIYATL 739

Query: 629 RDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKM 688
             + Q  TVR  +K + L K PG + IE+    +VF +GD+   Q   +  +LE L   M
Sbjct: 740 GKWDQVKTVRNSMKTKGLKKEPGSSWIEIQKRVYVFRTGDKSFEQYDKVKDLLEYLVRLM 799

Query: 689 REAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNL 741
            + G+  +   ALHDVEE++K  M+  HSE+LAIAFGL+ T+PG+ + I   L
Sbjct: 800 AKEGYVADLQFALHDVEEDDKRDMLCGHSERLAIAFGLLNTKPGSPLLIFPTL 852



 Score =  269 bits (688), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 174/592 (29%), Positives = 308/592 (52%), Gaps = 12/592 (2%)

Query: 5   TPQSRNLFL--SLLK---GAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCY 59
           TP+    FL  SLLK    AK   QL   H+ II  G    +    KL  + +  K    
Sbjct: 13  TPEPSQEFLRSSLLKTLSSAKNTPQLRTVHSLIITSGLSLSVIFSGKLISKYAQVKDPIS 72

Query: 60  ARALFFSI-PKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAA 118
           + ++F SI P  +++L+N IIR  ++N +   ++ +YT +R+   L PD FT+  V+++ 
Sbjct: 73  SVSVFRSISPTNNVYLWNSIIRALTHNGLFTQALGYYTEMREK-KLQPDAFTFPSVINSC 131

Query: 119 SACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWN 178
           +   D  +G ++H HA+  G+ SDL++G AL+D+Y +F  + +AR VF++M  +D+V WN
Sbjct: 132 ARILDLELGCIVHEHAMEMGFESDLYIGNALIDMYSRFVDLDNARYVFEEMSNRDSVSWN 191

Query: 179 SMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLK 238
           S+ISG   N  ++D++ ++    R  G   D  ++++VL A   +  ++ G+ +  +  K
Sbjct: 192 SLISGYCSNGFWEDALDMYHKF-RMTGMVPDCFTMSSVLLACGSLMAVKEGVAVHGVIEK 250

Query: 239 LGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRL 298
           +G    V +  GL+S Y K   +  A  +F  +   D ++ N MI GY   G+ E+S++L
Sbjct: 251 IGIAGDVIIGNGLLSMYFKFERLREARRVFSKMAVKDSVTWNTMICGYAQLGRHEASVKL 310

Query: 299 FRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSR 358
           F  ++      +  +I   I      G L +   +H + + SG   ++     L  +Y++
Sbjct: 311 FMDMI-DGFVPDMLSITSTIRACGQSGDLQVGKFVHKYLIGSGFECDTVACNILIDMYAK 369

Query: 359 LNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSI 418
             ++ AA+++FD +  K   +WN++I GYTQ+G  +E +  F+ M+  +  P+ VT   +
Sbjct: 370 CGDLLAAQEVFDTTKCKDSVTWNSLINGYTQSGYYKEGLESFKMMKMER-KPDSVTFVLL 428

Query: 419 LSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSE 478
           LS  +QL  I+ G+ +H  V    FE+ + +  +L+D+YAKCG + +  ++F  MS    
Sbjct: 429 LSIFSQLADINQGRGIHCDVIKFGFEAELIIGNSLLDVYAKCGEMDDLLKVFSYMSAHDI 488

Query: 479 VTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQS 538
           ++WNT+I+            Q+ +EM   G+ P   T L +L  CS   + R+G EI   
Sbjct: 489 ISWNTVIASSVHFDDCTVGFQMINEMRTEGLMPDEATVLGILPMCSLLAVRRQGKEI-HG 547

Query: 539 MIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGA 590
            I   GF+        ++++  + G LE  ++  K +  E     W AL+ A
Sbjct: 548 YIFKSGFESNVPIGNALIEMYSKCGSLENCIKVFKYMK-EKDVVTWTALISA 598



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 104/391 (26%), Positives = 190/391 (48%), Gaps = 16/391 (4%)

Query: 251 LVSFYSKCGEVERAELLFRDIVRPDLISC-NAMISGYTCNGKTESSLRLFRQLLASAERV 309
           L+S Y++  +   +  +FR I   + +   N++I   T NG    +L  + ++     + 
Sbjct: 60  LISKYAQVKDPISSVSVFRSISPTNNVYLWNSIIRALTHNGLFTQALGYYTEMREKKLQP 119

Query: 310 NSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLF 369
           ++ T   +I        L L   +H   ++ G  S+  +  AL  +YSR  +++ AR +F
Sbjct: 120 DAFTFPSVINSCARILDLELGCIVHEHAMEMGFESDLYIGNALIDMYSRFVDLDNARYVF 179

Query: 370 DESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAIS 429
           +E S +   SWN++I+GY  NG  E+A+ ++ + + + + P+  T+SS+L AC  L A+ 
Sbjct: 180 EEMSNRDSVSWNSLISGYCSNGFWEDALDMYHKFRMTGMVPDCFTMSSVLLACGSLMAVK 239

Query: 430 LGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYG 489
            G  VH +++      ++ +   L+ MY K   + EAR +F  M+ K  VTWNTMI GY 
Sbjct: 240 EGVAVHGVIEKIGIAGDVIIGNGLLSMYFKFERLREARRVFSKMAVKDSVTWNTMICGYA 299

Query: 490 LHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLA 549
             G    +++LF +M+  G  P  ++  S + AC  +G ++ G  + + +I   GF+   
Sbjct: 300 QLGRHEASVKLFMDMI-DGFVPDMLSITSTIRACGQSGDLQVGKFVHKYLI-GSGFE--C 355

Query: 550 EHYAC--MVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKL 607
           +  AC  ++D+  + G L  A E       +     W +L+     +  +   +   E  
Sbjct: 356 DTVACNILIDMYAKCGDLLAAQEVFDTTKCKDS-VTWNSLING---YTQSGYYKEGLESF 411

Query: 608 ----FELDPENVGYHVLLSNIYSAERDYLQA 634
                E  P++V + VLL +I+S   D  Q 
Sbjct: 412 KMMKMERKPDSVTF-VLLLSIFSQLADINQG 441


>gi|218192417|gb|EEC74844.1| hypothetical protein OsI_10704 [Oryza sativa Indica Group]
          Length = 614

 Score =  424 bits (1091), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 213/525 (40%), Positives = 312/525 (59%), Gaps = 34/525 (6%)

Query: 254 FYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLA-SAERVNSS 312
            Y++CG  + A  +F ++   D++S NAMISG+   G    ++ +FR+L+A    + ++ 
Sbjct: 1   MYARCGRPDDAYQMFEEMQYRDVVSWNAMISGFAHAGLFGRAMDVFRELVALQCPKPDAG 60

Query: 313 TIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDES 372
           T+  ++P                                 S   +R+ ++   + +FDE 
Sbjct: 61  TMASILP---------------------------------SMGKARVEDIALLKGVFDEM 87

Query: 373 SEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGK 432
               L SWNAM+A YT N +  EA+ LF  MQ   + P+ VT++++L +C ++ A+SLGK
Sbjct: 88  RFTGLISWNAMLAVYTNNEMHVEAVELFMRMQKDGIEPDAVTLATVLPSCGEVSALSLGK 147

Query: 433 WVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHG 492
            +HE++K R   S++ +  AL+DMYA CG + EAR++FD M  +  V+W ++IS YG HG
Sbjct: 148 RIHEVIKRRRMCSSMLLENALMDMYANCGCLKEARDVFDSMGTRDVVSWTSIISAYGRHG 207

Query: 493 HGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHY 552
           HG EA+ LF +M   G+ P  + F+++L ACSHAGL+  G   F SM  +    P  EHY
Sbjct: 208 HGREAIDLFEKMCGQGLEPDSIAFVAILAACSHAGLLDMGKHYFYSMTSEFHIAPKLEHY 267

Query: 553 ACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDP 612
           ACMVD+LGRAG + +A +FI  + ++P   VWGALLGAC IH + ++  +A++ L  L P
Sbjct: 268 ACMVDLLGRAGCIREAYDFIMVMPIKPNERVWGALLGACRIHSNMDIGLLAADSLLRLAP 327

Query: 613 ENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHP 672
           +  GY+VLLSNIY+    +   + VR V++ + + K PG +  E+G + H F  GD  HP
Sbjct: 328 KQTGYYVLLSNIYARAGRWADVSMVRSVMESKGIKKLPGVSNAELGDSVHTFHIGDTSHP 387

Query: 673 QSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPG 732
           QS  IY  L +L  ++RE G+  E    LHDVEEE+KE  + VHSEKLAIAF LI T PG
Sbjct: 388 QSKMIYKKLSELLRRIREMGYNPEVEATLHDVEEEDKEGHLSVHSEKLAIAFLLINTNPG 447

Query: 733 TEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGV 777
           T IRI  NLR C DCH A K IS + GR I+++D NR H+ K  +
Sbjct: 448 TPIRITMNLRTCSDCHHAAKLISTIAGREIILKDVNRIHYMKCNI 492



 Score =  108 bits (271), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 93/401 (23%), Positives = 181/401 (45%), Gaps = 41/401 (10%)

Query: 152 LYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDST 211
           +Y +      A ++F++M  +D V WN+MISG      F  ++ VF ++V       D+ 
Sbjct: 1   MYARCGRPDDAYQMFEEMQYRDVVSWNAMISGFAHAGLFGRAMDVFRELVALQCPKPDAG 60

Query: 212 SVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDI 271
           ++A++LP++ + +       ++ + L  G  D +   TGL+S+                 
Sbjct: 61  TMASILPSMGKAR-------VEDIALLKGVFDEMR-FTGLISW----------------- 95

Query: 272 VRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTN 331
                   NAM++ YT N     ++ LF ++       ++ T+  ++P       L L  
Sbjct: 96  --------NAMLAVYTNNEMHVEAVELFMRMQKDGIEPDAVTLATVLPSCGEVSALSLGK 147

Query: 332 CIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNG 391
            IH    +  + S+  +  AL  +Y+    ++ AR +FD    + + SW ++I+ Y ++G
Sbjct: 148 RIHEVIKRRRMCSSMLLENALMDMYANCGCLKEARDVFDSMGTRDVVSWTSIISAYGRHG 207

Query: 392 LTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGK-WVHELVKSRNFESNIYVS 450
              EAI LF++M    + P+ +   +IL+AC+  G + +GK + + +    +    +   
Sbjct: 208 HGREAIDLFEKMCGQGLEPDSIAFVAILAACSHAGLLDMGKHYFYSMTSEFHIAPKLEHY 267

Query: 451 TALIDMYAKCGNIVEARELFDLMSHK-SEVTWNTMISGYGLHGHGLEALQLFSEMLHSGI 509
             ++D+  + G I EA +   +M  K +E  W  ++    +H +    L     +L    
Sbjct: 268 ACMVDLLGRAGCIREAYDFIMVMPIKPNERVWGALLGACRIHSNMDIGLLAADSLLRLAP 327

Query: 510 RPSG-VTFLSVLYACSHAGLVREGD-EIFQSMIHDHGFKPL 548
           + +G    LS +YA   AG  R  D  + +S++   G K L
Sbjct: 328 KQTGYYVLLSNIYA--RAG--RWADVSMVRSVMESKGIKKL 364



 Score = 63.2 bits (152), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 45/169 (26%), Positives = 81/169 (47%), Gaps = 2/169 (1%)

Query: 61  RALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASA 120
           + +F  +    L  +N ++  ++NNEM   ++  +  ++K+  + PD  T + VL +   
Sbjct: 81  KGVFDEMRFTGLISWNAMLAVYTNNEMHVEAVELFMRMQKD-GIEPDAVTLATVLPSCGE 139

Query: 121 CCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSM 180
               S+G  +H         S + +  AL+D+Y     +K AR VFD M  +D V W S+
Sbjct: 140 VSALSLGKRIHEVIKRRRMCSSMLLENALMDMYANCGCLKEARDVFDSMGTRDVVSWTSI 199

Query: 181 ISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLG 229
           IS   ++   +++I +F  M    G   DS +  A+L A +    L +G
Sbjct: 200 ISAYGRHGHGREAIDLFEKMC-GQGLEPDSIAFVAILAACSHAGLLDMG 247


>gi|302760085|ref|XP_002963465.1| hypothetical protein SELMODRAFT_79732 [Selaginella moellendorffii]
 gi|300168733|gb|EFJ35336.1| hypothetical protein SELMODRAFT_79732 [Selaginella moellendorffii]
          Length = 829

 Score =  424 bits (1091), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 251/746 (33%), Positives = 405/746 (54%), Gaps = 35/746 (4%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           A+A F ++ + +L+ +  ++  F+ +   K ++     +R++  + PD  T+   ++A  
Sbjct: 98  AKAAFDALEQRNLYSWTGLVAAFAISGQSKETLRALERMRQD-GVRPDAVTF---ITALG 153

Query: 120 ACCDRSI---GVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVL 176
           +C D      G+ +H   + S    D  V  AL+++Y K   +  A++VF KM     V+
Sbjct: 154 SCGDPESLRDGIRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKMERTRNVI 213

Query: 177 WNSMISGLMKNCCFQDSIWVFGDMVRNG------GTWLDSTSVAAVLPAVAEVQELRLGM 230
             S+++G         ++W   + +R+       G     +++  +L A +    ++ G 
Sbjct: 214 SWSIMAGAH---ALHGNVW---EALRHFRFMLLLGIKATKSAMVTILSACSSPALVQDGR 267

Query: 231 EIQ-CLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFR--DIVRPDLISCNAMISGYT 287
            I  C+ L  GF   + V   +++ Y +CG VE A  +F   D    D++S N M+S Y 
Sbjct: 268 LIHSCIALS-GFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSAYV 326

Query: 288 CNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSS 347
            N + + +++L++++   A++V   T V L+        + L   +H   +   +  N  
Sbjct: 327 HNDRGKDAIQLYQRMQLRADKV---TYVSLLSACSSAEDVGLGRVLHKQIVNDELEKNVI 383

Query: 348 VLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEM---- 403
           V  AL ++Y++      AR +FD+  ++S+ SW  +I+ Y +  L  EA  LFQ+M    
Sbjct: 384 VGNALVSMYAKCGSHTEARAVFDKMEQRSIISWTTIISAYVRRRLVAEACHLFQQMLELE 443

Query: 404 ---QASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKC 460
               + +V P+ +   +IL+ACA + A+  GK V E   S    S+  V TA++++Y KC
Sbjct: 444 KNGSSQRVKPDALAFVTILNACADVSALEQGKMVSEQAASCGLSSDKAVGTAVVNLYGKC 503

Query: 461 GNIVEARELFDLMSHKSEVT-WNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSV 519
           G I E R +FD +  + +V  WN MI+ Y   G   EAL+LF  M   G+RP   +F+S+
Sbjct: 504 GEIEEGRRIFDGVCSRPDVQLWNAMIAVYAQFGQSHEALKLFWRMEMEGVRPDSFSFVSI 563

Query: 520 LYACSHAGLVREGDEIFQSMIHDH-GFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVE 578
           L ACSH GL  +G   F SM  ++       +H+ C+ D+LGR G+L++A EF++ L V+
Sbjct: 564 LLACSHTGLEDQGKSYFTSMTTEYRNVTRTIQHFGCVADLLGRGGRLKEAEEFLEKLPVK 623

Query: 579 PGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVR 638
           P    W +LL AC  H+D   A+  + KL  L+P     +V LSNIY+  + +   A VR
Sbjct: 624 PDAVAWTSLLAACRNHRDLKRAKEVANKLLRLEPRCATGYVALSNIYAELQKWHAVAKVR 683

Query: 639 QVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETV 698
           + + ++ + K  G + IE+G   H F +GD  HP++  I   L KL+ +M+E G+  +T 
Sbjct: 684 KFMAEQGVKKERGVSTIEIGKYMHDFATGDDAHPRNREIREELAKLHSQMKECGYVPDTK 743

Query: 699 TALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVT 758
             LH V+E+EKE ++  HSE+LAIA GLI+T  GT +R+ KNLRVC DCHTATK ISK+ 
Sbjct: 744 MVLHFVDEQEKERLLFSHSERLAIALGLISTPLGTPLRVTKNLRVCSDCHTATKLISKIA 803

Query: 759 GRVIVVRDANRFHHFKGGVCSCGDYW 784
           GR IVVRD  RFH FK G CSC DYW
Sbjct: 804 GRKIVVRDPTRFHLFKDGKCSCQDYW 829



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 132/504 (26%), Positives = 235/504 (46%), Gaps = 22/504 (4%)

Query: 100 KNTALTPDNFTYSFVLS----AASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFK 155
           +  A+  +N TY+ +L     A +    R I  L   H ++ G   +L +G  +V +Y  
Sbjct: 35  EKQAVRAENATYARLLQRCARAQALPEGRKIHSLAVKHNLLPG---NLILGNHIVSMYAH 91

Query: 156 FSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAA 215
                 A+  FD + +++   W  +++    +   ++++     M R  G   D+ +   
Sbjct: 92  CDSPGDAKAAFDALEQRNLYSWTGLVAAFAISGQSKETLRALERM-RQDGVRPDAVTFIT 150

Query: 216 VLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRP- 274
            L +  + + LR G+ I  + +         V   L++ Y KCG +  A+ +F  + R  
Sbjct: 151 ALGSCGDPESLRDGIRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKMERTR 210

Query: 275 DLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIH 334
           ++IS + M   +  +G    +LR FR +L    +   S +V ++        +     IH
Sbjct: 211 NVISWSIMAGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPALVQDGRLIH 270

Query: 335 SFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSE--KSLASWNAMIAGYTQNGL 392
           S    SG  S   V  A+ T+Y R   +E ARK+FD   E  + + SWN M++ Y  N  
Sbjct: 271 SCIALSGFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSAYVHNDR 330

Query: 393 TEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTA 452
            ++AI L+Q MQ   +  + VT  S+LSAC+    + LG+ +H+ + +   E N+ V  A
Sbjct: 331 GKDAIQLYQRMQ---LRADKVTYVSLLSACSSAEDVGLGRVLHKQIVNDELEKNVIVGNA 387

Query: 453 LIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLH------ 506
           L+ MYAKCG+  EAR +FD M  +S ++W T+IS Y       EA  LF +ML       
Sbjct: 388 LVSMYAKCGSHTEARAVFDKMEQRSIISWTTIISAYVRRRLVAEACHLFQQMLELEKNGS 447

Query: 507 -SGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQL 565
              ++P  + F+++L AC+    + +G ++        G          +V++ G+ G++
Sbjct: 448 SQRVKPDALAFVTILNACADVSALEQG-KMVSEQAASCGLSSDKAVGTAVVNLYGKCGEI 506

Query: 566 EKALEFIKGLAVEPGPAVWGALLG 589
           E+      G+   P   +W A++ 
Sbjct: 507 EEGRRIFDGVCSRPDVQLWNAMIA 530



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 85/312 (27%), Positives = 155/312 (49%), Gaps = 5/312 (1%)

Query: 333 IHSFCLKSGIVSNSSVL-TALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNG 391
           IHS  +K  ++  + +L   + ++Y+  +    A+  FD   +++L SW  ++A +  +G
Sbjct: 65  IHSLAVKHNLLPGNLILGNHIVSMYAHCDSPGDAKAAFDALEQRNLYSWTGLVAAFAISG 124

Query: 392 LTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVST 451
            ++E +   + M+   V P+ VT  + L +C    ++  G  +H++V     E +  VS 
Sbjct: 125 QSKETLRALERMRQDGVRPDAVTFITALGSCGDPESLRDGIRIHQMVVDSRLEIDPKVSN 184

Query: 452 ALIDMYAKCGNIVEARELFDLMSH-KSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIR 510
           AL++MY KCG++  A+ +F  M   ++ ++W+ M   + LHG+  EAL+ F  ML  GI+
Sbjct: 185 ALLNMYKKCGSLSHAKRVFAKMERTRNVISWSIMAGAHALHGNVWEALRHFRFMLLLGIK 244

Query: 511 PSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALE 570
            +    +++L ACS   LV++G  +  S I   GF+        ++ + GR G +E+A +
Sbjct: 245 ATKSAMVTILSACSSPALVQDG-RLIHSCIALSGFESELLVANAVMTMYGRCGAVEEARK 303

Query: 571 FIKGLAVEPGPAV-WGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAER 629
               +       V W  +L A  +H D     +   +  +L  + V Y  LLS   SAE 
Sbjct: 304 VFDAMDEALRDVVSWNIMLSA-YVHNDRGKDAIQLYQRMQLRADKVTYVSLLSACSSAED 362

Query: 630 DYLQAATVRQVV 641
             L     +Q+V
Sbjct: 363 VGLGRVLHKQIV 374



 Score = 80.1 bits (196), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 45/194 (23%), Positives = 88/194 (45%), Gaps = 2/194 (1%)

Query: 402 EMQASKVAPNPVTVSSILSACAQLGAISLGKWVHEL-VKSRNFESNIYVSTALIDMYAKC 460
           +++   V     T + +L  CA+  A+  G+ +H L VK      N+ +   ++ MYA C
Sbjct: 33  DLEKQAVRAENATYARLLQRCARAQALPEGRKIHSLAVKHNLLPGNLILGNHIVSMYAHC 92

Query: 461 GNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVL 520
            +  +A+  FD +  ++  +W  +++ + + G   E L+    M   G+RP  VTF++ L
Sbjct: 93  DSPGDAKAAFDALEQRNLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVTFITAL 152

Query: 521 YACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPG 580
            +C     +R+G  I Q M+ D   +   +    ++++  + G L  A      +     
Sbjct: 153 GSCGDPESLRDGIRIHQ-MVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKMERTRN 211

Query: 581 PAVWGALLGACMIH 594
              W  + GA  +H
Sbjct: 212 VISWSIMAGAHALH 225


>gi|356562016|ref|XP_003549271.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Glycine max]
          Length = 705

 Score =  424 bits (1091), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 223/566 (39%), Positives = 331/566 (58%), Gaps = 12/566 (2%)

Query: 231 EIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAE--LLFRDIVRP----DLISCNAMIS 284
           +I  L LKLG H +  VLT   +  S    V  A   L   D   P    D    N +I 
Sbjct: 140 QIHSLILKLGLHHNPLVLTKFAATSSHFNAVHYASSVLFPNDQTTPPPSHDAFLFNTLIR 199

Query: 285 GYTCNGKTES-SLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIV 343
            +     ++  +LR +  +   A   N  T   ++        L L   +H+  +K G  
Sbjct: 200 AFAQTTHSKPHALRFYNTMRRHAVSPNKFTFPFVLKACAGMMRLELGGAVHASMVKFGFE 259

Query: 344 SNSSVLTALSTVY-----SRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAIS 398
            +  V   L  +Y        +   +A+K+FDES  K   +W+AMI GY + G +  A++
Sbjct: 260 EDPHVRNTLVHMYCCCCQDGSSGPVSAKKVFDESPVKDSVTWSAMIGGYARAGNSARAVT 319

Query: 399 LFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYA 458
           LF+EMQ + V P+ +T+ S+LSACA LGA+ LGKW+   ++ +N   ++ +  ALIDM+A
Sbjct: 320 LFREMQVTGVCPDEITMVSVLSACADLGALELGKWLESYIERKNIMRSVELCNALIDMFA 379

Query: 459 KCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLS 518
           KCG++  A ++F  M  ++ V+W +MI G  +HG GLEA+ +F EM+  G+ P  V F+ 
Sbjct: 380 KCGDVDRAVKVFREMKVRTIVSWTSMIVGLAMHGRGLEAVLVFDEMMEQGVDPDDVAFIG 439

Query: 519 VLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVE 578
           VL ACSH+GLV +G   F +M +     P  EHY CMVD+L RAG++ +ALEF++ + VE
Sbjct: 440 VLSACSHSGLVDKGHYYFNTMENMFSIVPKIEHYGCMVDMLSRAGRVNEALEFVRAMPVE 499

Query: 579 PGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVR 638
           P   +W +++ AC    +  L    +++L   +P +   +VLLSNIY+    + +   VR
Sbjct: 500 PNQVIWRSIVTACHARGELKLGESVAKELIRREPSHESNYVLLSNIYAKLLRWEKKTKVR 559

Query: 639 QVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETV 698
           +++  + + K PG T+IE+    + F +GD+ H Q   IY M+E++  +++ AG+   T 
Sbjct: 560 EMMDVKGMRKIPGSTMIEMNNEIYEFVAGDKSHDQYKEIYEMVEEMGREIKRAGYVPTTS 619

Query: 699 TALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVT 758
             L D++EE+KE  +  HSEKLAIAF L++T PGT IRI+KNLRVC DCH+ATKFISKV 
Sbjct: 620 QVLLDIDEEDKEDALYRHSEKLAIAFALLSTPPGTPIRIVKNLRVCEDCHSATKFISKVY 679

Query: 759 GRVIVVRDANRFHHFKGGVCSCGDYW 784
            R IVVRD NRFHHFK G+CSCGD+W
Sbjct: 680 NREIVVRDRNRFHHFKNGLCSCGDFW 705



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 127/475 (26%), Positives = 221/475 (46%), Gaps = 54/475 (11%)

Query: 27  QTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFF----SIPKP--DLFLFNVIIR 80
           Q H+ I+  G  ++   +TK A   S F A  YA ++ F    + P P  D FLFN +IR
Sbjct: 140 QIHSLILKLGLHHNPLVLTKFAATSSHFNAVHYASSVLFPNDQTTPPPSHDAFLFNTLIR 199

Query: 81  GFSNNEMPKS-SICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGY 139
            F+     K  ++ FY  +R++ A++P+ FT+ FVL A +      +G  +H   +  G+
Sbjct: 200 AFAQTTHSKPHALRFYNTMRRH-AVSPNKFTFPFVLKACAGMMRLELGGAVHASMVKFGF 258

Query: 140 GSDLFVGAALVDLYF-----KFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSI 194
             D  V   LV +Y        S   SA+KVFD+ P KD+V W++MI G  +      ++
Sbjct: 259 EEDPHVRNTLVHMYCCCCQDGSSGPVSAKKVFDESPVKDSVTWSAMIGGYARAGNSARAV 318

Query: 195 WVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSF 254
            +F +M +  G   D  ++ +VL A A++  L LG  ++    +      V +   L+  
Sbjct: 319 TLFREM-QVTGVCPDEITMVSVLSACADLGALELGKWLESYIERKNIMRSVELCNALIDM 377

Query: 255 YSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTI 314
           ++KCG+V+RA  +FR++    ++S  +MI G   +G+   ++ +F +++      +    
Sbjct: 378 FAKCGDVDRAVKVFREMKVRTIVSWTSMIVGLAMHGRGLEAVLVFDEMMEQGVDPDDVAF 437

Query: 315 VGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSE 374
           +G++                S C  SG+V            +   N ME    +F  S  
Sbjct: 438 IGVL----------------SACSHSGLVDKG---------HYYFNTME---NMF--SIV 467

Query: 375 KSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWV 434
             +  +  M+   ++ G   EA+   + M    V PN V   SI++AC   G + LG+ V
Sbjct: 468 PKIEHYGCMVDMLSRAGRVNEALEFVRAM---PVEPNQVIWRSIVTACHARGELKLGESV 524

Query: 435 -HELVKSRNFESNIYVSTALIDMYAKC---GNIVEARELFDLMSHKSEVTWNTMI 485
             EL++      + YV   L ++YAK        + RE+ D+   + ++  +TMI
Sbjct: 525 AKELIRREPSHESNYV--LLSNIYAKLLRWEKKTKVREMMDVKGMR-KIPGSTMI 576


>gi|296089484|emb|CBI39303.3| unnamed protein product [Vitis vinifera]
          Length = 723

 Score =  424 bits (1091), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 242/725 (33%), Positives = 380/725 (52%), Gaps = 9/725 (1%)

Query: 67  IPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSI 126
           +PK ++  +N +I G++        +  +   R  + L  D FT+S  LS      D  +
Sbjct: 1   MPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARM-SDLRLDKFTFSNALSVCGRTLDLRL 59

Query: 127 GVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMK 186
           G L+H    VSG G  + +  +L+D+Y K   +  AR VF+   E D+V WNS+I+G ++
Sbjct: 60  GRLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLIAGYVR 119

Query: 187 NCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAE--VQELRLGMEIQCLGLKLGFHDH 244
                + + +   M+R+G   L+S ++ + L A        +  G  +    +KLG    
Sbjct: 120 IGSNDEMLRLLVKMLRHGLN-LNSYALGSALKACGSNFSSSIECGKMLHGCAVKLGLDLD 178

Query: 245 VYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGY-----TCNGKTESSLRLF 299
           V V T L+  Y+K G++E A  +F+ +  P+++  NAMI+G+       +     ++ LF
Sbjct: 179 VVVGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFANEAMYLF 238

Query: 300 RQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRL 359
            ++ +   + +  T   ++              IH+   K  + S+  +  AL  +YS  
Sbjct: 239 FEMQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNALVELYSLS 298

Query: 360 NEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSIL 419
             +E   K F  + +  + SW ++I G+ QNG  E  ++LF E+  S   P+  T+S +L
Sbjct: 299 GSIEDGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGRKPDEFTISIML 358

Query: 420 SACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEV 479
           SACA L A+  G+ +H         +   +  + I MYAKCG+I  A   F    +   V
Sbjct: 359 SACANLAAVKSGEQIHAYAIKTGIGNFTIIQNSQICMYAKCGDIDSANMTFKETKNPDIV 418

Query: 480 TWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSM 539
           +W+ MIS    HG   EA+ LF  M  SGI P+ +TFL VL ACSH GLV EG   F+ M
Sbjct: 419 SWSVMISSNAQHGCAKEAVDLFELMKGSGIAPNHITFLGVLVACSHGGLVEEGLRYFEIM 478

Query: 540 IHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNL 599
             DHG  P  +H AC+VD+LGRAG+L +A  FI     E  P +W +LL AC +HK T+ 
Sbjct: 479 KKDHGITPNVKHSACIVDLLGRAGRLAEAESFIMDSGFEGDPVMWRSLLSACRVHKATDT 538

Query: 600 ARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGG 659
            +  +E++ EL+PE    +VLL NIY+     + A  +R ++K R + K PG + IEVG 
Sbjct: 539 GKRVAERVIELEPEAAASYVLLYNIYNDAGIQMPATEIRNLMKDRGVKKEPGLSWIEVGN 598

Query: 660 TPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEK 719
             H F +GD+ HP S  IY  LE++  ++++  +  E + +     + +   M+  HSEK
Sbjct: 599 VVHSFVAGDRSHPNSQVIYVQLEEMLEEIKKLDYIDEKLVSDASEPKHKDNSMVSYHSEK 658

Query: 720 LAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCS 779
           LA+ FG+I+      +R++KNLR C  CH   K  S++  R I++RD  RFH F+ G CS
Sbjct: 659 LAVTFGIISLPRSAPVRVMKNLRSCWHCHETMKLFSRLENREIILRDPIRFHRFRDGSCS 718

Query: 780 CGDYW 784
           CGDYW
Sbjct: 719 CGDYW 723



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 103/423 (24%), Positives = 183/423 (43%), Gaps = 43/423 (10%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSN-----NEMPKSSICFYTHLRKNTALTPDNFTYSFV 114
           A  +F  +P P++ ++N +I GF       +E    ++  +  + ++  + P  FT+S +
Sbjct: 198 ATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFANEAMYLFFEM-QSRGMKPSEFTFSSI 256

Query: 115 LSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDT 174
           L A S       G  +H         SD F+G ALV+LY     ++   K F   P+ D 
Sbjct: 257 LKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNALVELYSLSGSIEDGLKCFHSTPKLDV 316

Query: 175 VLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQC 234
           V W S+I G ++N  F+  + +F +++ +G    D  +++ +L A A +  ++ G +I  
Sbjct: 317 VSWTSLIVGHVQNGQFEGGLTLFHELLFSGRK-PDEFTISIMLSACANLAAVKSGEQIHA 375

Query: 235 LGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTES 294
             +K G  +   +    +  Y+KCG+++ A + F++   PD++S + MIS    +G  + 
Sbjct: 376 YAIKTGIGNFTIIQNSQICMYAKCGDIDSANMTFKETKNPDIVSWSVMISSNAQHGCAKE 435

Query: 295 SLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALST 354
           ++ LF  +  S    N  T +G+           L  C H   ++ G             
Sbjct: 436 AVDLFELMKGSGIAPNHITFLGV-----------LVACSHGGLVEEG------------- 471

Query: 355 VYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVT 414
               L   E  +K  D     ++     ++    + G   EA S   +   S    +PV 
Sbjct: 472 ----LRYFEIMKK--DHGITPNVKHSACIVDLLGRAGRLAEAESFIMD---SGFEGDPVM 522

Query: 415 VSSILSACAQLGAISLGKWVHELVKSRNFESNI-YVSTALIDMYAKCGNIVEARELFDLM 473
             S+LSAC    A   GK V E V     E+   YV   L ++Y   G  + A E+ +LM
Sbjct: 523 WRSLLSACRVHKATDTGKRVAERVIELEPEAAASYV--LLYNIYNDAGIQMPATEIRNLM 580

Query: 474 SHK 476
             +
Sbjct: 581 KDR 583


>gi|226492710|ref|NP_001145953.1| uncharacterized protein LOC100279479 [Zea mays]
 gi|219885099|gb|ACL52924.1| unknown [Zea mays]
          Length = 530

 Score =  424 bits (1090), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 216/531 (40%), Positives = 322/531 (60%), Gaps = 3/531 (0%)

Query: 255 YSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTI 314
           Y KCG V  A  +F  +   D++S   +I+GY  N     ++ L   +L +  R N  T 
Sbjct: 2   YCKCGAVSDARHVFDKMPSRDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFTF 61

Query: 315 VGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSE 374
             L+      G   +   +H+  +K     +  V +AL  +Y+R  +M+ A  +FD    
Sbjct: 62  TSLLKATGACGGCSIGEQMHALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRLVS 121

Query: 375 KSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWV 434
           K+  SWNA+IAG+ +    E  +  F EMQ +       T SS+ SA A++GA+  G+WV
Sbjct: 122 KNEVSWNALIAGFARKADGETTLMKFAEMQRNGFGATHFTYSSMFSAFARIGALEQGRWV 181

Query: 435 H-ELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGH 493
           H  L+KS   +   +V   ++ MYAK G++V+AR++FD M  +  VTWNTM++    +G 
Sbjct: 182 HAHLIKSGQ-KLTAFVGNTMLGMYAKSGSMVDARKVFDRMDKRDLVTWNTMLTALAQYGL 240

Query: 494 GLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYA 553
           G EA+  F E+   GI+ + +TFLSVL ACSH GLV+EG   F  M+ D+  +P  +HY 
Sbjct: 241 GKEAVAHFEEIRKCGIQLNQITFLSVLTACSHGGLVKEGKHYFD-MMKDYNVQPEIDHYV 299

Query: 554 CMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPE 613
             VD+LGRAG L++AL F+  + +EP  AVWGALLGAC +HK+  + + A++ +FELDP+
Sbjct: 300 SFVDLLGRAGLLKEALIFVFKMPMEPTAAVWGALLGACRMHKNAKMGQYAADHVFELDPD 359

Query: 614 NVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQ 673
           + G  VLL NIY++   +  AA VR+++K   + K P C+ +++  + H+F + D  HP+
Sbjct: 360 DTGPPVLLYNIYASTGKWNDAARVRKMMKATGVKKEPACSWVQIENSVHMFVADDDTHPK 419

Query: 674 STAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGT 733
           S  IY M E++N ++++AG+   T   L  + E+E+E  +K HSEK+A+AF LI    G 
Sbjct: 420 SGDIYRMWEEINMRIKKAGYVPNTAHVLLHINEQERETKLKYHSEKIALAFALINMPAGA 479

Query: 734 EIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
            IRI+KN+R+C DCH+A K++SKV  R IVVRD NRFHHF  G CSCGDYW
Sbjct: 480 SIRIMKNIRICGDCHSAFKYVSKVFKREIVVRDTNRFHHFSEGSCSCGDYW 530



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 92/346 (26%), Positives = 171/346 (49%), Gaps = 12/346 (3%)

Query: 152 LYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVR-----NGGT 206
           +Y K   V  AR VFDKMP +D V W  +I+G  +N    ++I +  DM+R     NG T
Sbjct: 1   MYCKCGAVSDARHVFDKMPSRDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFT 60

Query: 207 WLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAEL 266
           +       ++L A        +G ++  L +K  + + VYV + L+  Y++C +++ A +
Sbjct: 61  F------TSLLKATGACGGCSIGEQMHALAVKYNWDEDVYVGSALLDMYARCEQMDMAIM 114

Query: 267 LFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGH 326
           +F  +V  + +S NA+I+G+      E++L  F ++  +       T   +   F   G 
Sbjct: 115 VFDRLVSKNEVSWNALIAGFARKADGETTLMKFAEMQRNGFGATHFTYSSMFSAFARIGA 174

Query: 327 LHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAG 386
           L     +H+  +KSG    + V   +  +Y++   M  ARK+FD   ++ L +WN M+  
Sbjct: 175 LEQGRWVHAHLIKSGQKLTAFVGNTMLGMYAKSGSMVDARKVFDRMDKRDLVTWNTMLTA 234

Query: 387 YTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESN 446
             Q GL +EA++ F+E++   +  N +T  S+L+AC+  G +  GK   +++K  N +  
Sbjct: 235 LAQYGLGKEAVAHFEEIRKCGIQLNQITFLSVLTACSHGGLVKEGKHYFDMMKDYNVQPE 294

Query: 447 IYVSTALIDMYAKCGNIVEAR-ELFDLMSHKSEVTWNTMISGYGLH 491
           I    + +D+  + G + EA   +F +    +   W  ++    +H
Sbjct: 295 IDHYVSFVDLLGRAGLLKEALIFVFKMPMEPTAAVWGALLGACRMH 340



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 61/186 (32%), Positives = 103/186 (55%)

Query: 355 VYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVT 414
           +Y +   +  AR +FD+   + + SW  +IAGY QN +  EAI L  +M  ++  PN  T
Sbjct: 1   MYCKCGAVSDARHVFDKMPSRDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFT 60

Query: 415 VSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMS 474
            +S+L A    G  S+G+ +H L    N++ ++YV +AL+DMYA+C  +  A  +FD + 
Sbjct: 61  FTSLLKATGACGGCSIGEQMHALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRLV 120

Query: 475 HKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDE 534
            K+EV+WN +I+G+     G   L  F+EM  +G   +  T+ S+  A +  G + +G  
Sbjct: 121 SKNEVSWNALIAGFARKADGETTLMKFAEMQRNGFGATHFTYSSMFSAFARIGALEQGRW 180

Query: 535 IFQSMI 540
           +   +I
Sbjct: 181 VHAHLI 186



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 103/457 (22%), Positives = 201/457 (43%), Gaps = 57/457 (12%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           AR +F  +P  D+  +  +I G++ N MP  +I     + +     P+ FT++ +L A  
Sbjct: 11  ARHVFDKMPSRDVVSWTYLIAGYAQNYMPAEAIGLLPDMLR-ARFRPNGFTFTSLLKATG 69

Query: 120 ACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNS 179
           AC   SIG  +H  A+   +  D++VG+AL+D+Y +   +  A  VFD++  K+ V WN+
Sbjct: 70  ACGGCSIGEQMHALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRLVSKNEVSWNA 129

Query: 180 MISGLMKNCCFQDSIWVFGDMVRNGGTWLDST--SVAAVLPAVAEVQELRLGMEIQCLGL 237
           +I+G  +    + ++  F +M RNG     +T  + +++  A A +  L  G  +    +
Sbjct: 130 LIAGFARKADGETTLMKFAEMQRNG---FGATHFTYSSMFSAFARIGALEQGRWVHAHLI 186

Query: 238 KLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLR 297
           K G     +V   ++  Y+K G +  A  +F  + + DL++ N M++     G  + ++ 
Sbjct: 187 KSGQKLTAFVGNTMLGMYAKSGSMVDARKVFDRMDKRDLVTWNTMLTALAQYGLGKEAVA 246

Query: 298 LFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSG-----IVSNSSVLTAL 352
            F ++     ++N  T + +           LT C H   +K G     ++ + +V   +
Sbjct: 247 HFEEIRKCGIQLNQITFLSV-----------LTACSHGGLVKEGKHYFDMMKDYNVQPEI 295

Query: 353 STVYSRLNEM-------EAARKLFDESSEKSLASWNAMIAG---YTQNGLTEEAISLFQE 402
               S ++ +       EA   +F    E + A W A++     +    + + A     E
Sbjct: 296 DHYVSFVDLLGRAGLLKEALIFVFKMPMEPTAAVWGALLGACRMHKNAKMGQYAADHVFE 355

Query: 403 MQASKVAPNPVTVSSILSACAQLGAISLGKW-----VHELVKSR-----------NFESN 446
           +      P PV + +I +        S GKW     V +++K+              E++
Sbjct: 356 LDPDDTGP-PVLLYNIYA--------STGKWNDAARVRKMMKATGVKKEPACSWVQIENS 406

Query: 447 IYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNT 483
           +++  A  D + K G+I    E  ++   K+    NT
Sbjct: 407 VHMFVADDDTHPKSGDIYRMWEEINMRIKKAGYVPNT 443


>gi|356550971|ref|XP_003543853.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39680-like [Glycine max]
          Length = 703

 Score =  424 bits (1090), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 232/662 (35%), Positives = 378/662 (57%), Gaps = 4/662 (0%)

Query: 127 GVLLHGHAIV---SGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISG 183
           G  +H   +V   +   SD+    +L++LY K    K ARK+FD+M +++ V W++++ G
Sbjct: 42  GKTIHAQLVVRNQTSKDSDITQINSLINLYSKCGQSKCARKLFDRMLQRNVVSWSALMMG 101

Query: 184 LMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHD 243
            +      + + +F ++V     + +      VL   A+   ++ G +     LK G   
Sbjct: 102 YLHKGEVLEVLGLFRNLVSLDSAYPNEYIFTIVLSCCADSGRVKEGKQCHGYLLKSGLLL 161

Query: 244 HVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLL 303
           H YV   L+  YS+C  V+ A  +   +   D+ S N+++S    +G    + ++ ++++
Sbjct: 162 HQYVKNALIHMYSRCFHVDSAMQILDTVPGDDVFSYNSILSALVESGCRGEAAQVLKRMV 221

Query: 304 ASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEME 363
                 +S T V ++ +      L L   IH+  LK+G+V +  V + L   Y +  E+ 
Sbjct: 222 DECVIWDSVTYVSVLGLCAQIRDLQLGLQIHAQLLKTGLVFDVFVSSTLIDTYGKCGEVL 281

Query: 364 AARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACA 423
            ARK FD   ++++ +W A++  Y QNG  EE ++LF +M+     PN  T + +L+ACA
Sbjct: 282 NARKQFDGLRDRNVVAWTAVLTAYLQNGHFEETLNLFTKMELEDTRPNEFTFAVLLNACA 341

Query: 424 QLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNT 483
            L A++ G  +H  +    F++++ V  ALI+MY+K GNI  +  +F  M ++  +TWN 
Sbjct: 342 SLVALAYGDLLHGRIVMSGFKNHLIVGNALINMYSKSGNIDSSYNVFSNMMNRDVITWNA 401

Query: 484 MISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDH 543
           MI GY  HG G +AL +F +M+ +G  P+ VTF+ VL AC H  LV+EG   F  ++   
Sbjct: 402 MICGYSHHGLGKQALLVFQDMMSAGECPNYVTFIGVLSACVHLALVQEGFYYFDQIMKKF 461

Query: 544 GFKPLAEHYACMVDILGRAGQLEKALEFIKGLA-VEPGPAVWGALLGACMIHKDTNLARV 602
             +P  EHY CMV +LGRAG L++A  F+K    V+     W  LL AC IH++ NL + 
Sbjct: 462 DVEPGLEHYTCMVALLGRAGLLDEAENFMKTTTQVKWDVVAWRTLLNACHIHRNYNLGKQ 521

Query: 603 ASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPH 662
            +E + ++DP +VG + LLSN+++  R +     +R+++K+R + K PG + +++    H
Sbjct: 522 ITETVIQMDPHDVGTYTLLSNMHAKARKWDGVVKIRKLMKERNIKKEPGASWLDIRNNTH 581

Query: 663 VFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAI 722
           VF S    HP+ST I+  +++L   ++  G+  +    LHDVE+E+KE  +  HSEKLA+
Sbjct: 582 VFVSEGSNHPESTQIFEKVQQLLAMIKPLGYAPDVGVVLHDVEDEQKEGYLSHHSEKLAL 641

Query: 723 AFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGD 782
           A+GL+   P   IRIIKNLR+C DCH A K ISK T R+I+VRDANRFHHF+ G+C+C D
Sbjct: 642 AYGLMKIPPPGPIRIIKNLRMCDDCHIAVKLISKATNRLIIVRDANRFHHFREGLCTCND 701

Query: 783 YW 784
           +W
Sbjct: 702 HW 703



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 125/491 (25%), Positives = 240/491 (48%), Gaps = 11/491 (2%)

Query: 1   MSMKTPQSRNLFLSLLKGAKTQSQL---TQTHAQIIIHG---FQNDLSTVTKLAHRLSDF 54
           M +  P S    ++LLK + T   L      HAQ+++       +D++ +  L +  S  
Sbjct: 15  MYLPHPCSLKEVVNLLKFSATAKSLRFGKTIHAQLVVRNQTSKDSDITQINSLINLYSKC 74

Query: 55  KATCYARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFV 114
             +  AR LF  + + ++  ++ ++ G+ +       +  + +L    +  P+ + ++ V
Sbjct: 75  GQSKCARKLFDRMLQRNVVSWSALMMGYLHKGEVLEVLGLFRNLVSLDSAYPNEYIFTIV 134

Query: 115 LSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDT 174
           LS  +       G   HG+ + SG     +V  AL+ +Y +   V SA ++ D +P  D 
Sbjct: 135 LSCCADSGRVKEGKQCHGYLLKSGLLLHQYVKNALIHMYSRCFHVDSAMQILDTVPGDDV 194

Query: 175 VLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQC 234
             +NS++S L+++ C  ++  V   MV     W DS +  +VL   A++++L+LG++I  
Sbjct: 195 FSYNSILSALVESGCRGEAAQVLKRMVDECVIW-DSVTYVSVLGLCAQIRDLQLGLQIHA 253

Query: 235 LGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTES 294
             LK G    V+V + L+  Y KCGEV  A   F  +   ++++  A+++ Y  NG  E 
Sbjct: 254 QLLKTGLVFDVFVSSTLIDTYGKCGEVLNARKQFDGLRDRNVVAWTAVLTAYLQNGHFEE 313

Query: 295 SLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALST 354
           +L LF ++     R N  T   L+        L   + +H   + SG  ++  V  AL  
Sbjct: 314 TLNLFTKMELEDTRPNEFTFAVLLNACASLVALAYGDLLHGRIVMSGFKNHLIVGNALIN 373

Query: 355 VYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVT 414
           +YS+   ++++  +F     + + +WNAMI GY+ +GL ++A+ +FQ+M ++   PN VT
Sbjct: 374 MYSKSGNIDSSYNVFSNMMNRDVITWNAMICGYSHHGLGKQALLVFQDMMSAGECPNYVT 433

Query: 415 VSSILSACAQLGAISLG-KWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLM 473
              +LSAC  L  +  G  +  +++K  + E  +   T ++ +  + G + EA    + M
Sbjct: 434 FIGVLSACVHLALVQEGFYYFDQIMKKFDVEPGLEHYTCMVALLGRAGLLDEAE---NFM 490

Query: 474 SHKSEVTWNTM 484
              ++V W+ +
Sbjct: 491 KTTTQVKWDVV 501



 Score =  117 bits (292), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 101/422 (23%), Positives = 198/422 (46%), Gaps = 38/422 (9%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           A  +  ++P  D+F +N I+     +     +      +  +  +  D+ TY  VL   +
Sbjct: 182 AMQILDTVPGDDVFSYNSILSALVESGCRGEAAQVLKRM-VDECVIWDSVTYVSVLGLCA 240

Query: 120 ACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNS 179
              D  +G+ +H   + +G   D+FV + L+D Y K   V +ARK FD + +++ V W +
Sbjct: 241 QIRDLQLGLQIHAQLLKTGLVFDVFVSSTLIDTYGKCGEVLNARKQFDGLRDRNVVAWTA 300

Query: 180 MISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKL 239
           +++  ++N  F++++ +F  M     T  +  + A +L A A +  L  G  +    +  
Sbjct: 301 VLTAYLQNGHFEETLNLFTKMELE-DTRPNEFTFAVLLNACASLVALAYGDLLHGRIVMS 359

Query: 240 GFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLF 299
           GF +H+ V   L++ YSK G ++ +  +F +++  D+I+ NAMI GY+ +G  + +L +F
Sbjct: 360 GFKNHLIVGNALINMYSKSGNIDSSYNVFSNMMNRDVITWNAMICGYSHHGLGKQALLVF 419

Query: 300 RQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRL 359
           + ++++ E  N  T +G+           L+ C+H   ++ G      ++          
Sbjct: 420 QDMMSAGECPNYVTFIGV-----------LSACVHLALVQEGFYYFDQIM---------- 458

Query: 360 NEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSIL 419
                  K FD   E  L  +  M+A   + GL +EA +  +    ++V  + V   ++L
Sbjct: 459 -------KKFD--VEPGLEHYTCMVALLGRAGLLDEAENFMK--TTTQVKWDVVAWRTLL 507

Query: 420 SACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKC---GNIVEARELFDLMSHK 476
           +AC      +LGK + E V   +   ++   T L +M+AK      +V+ R+L    + K
Sbjct: 508 NACHIHRNYNLGKQITETVIQMD-PHDVGTYTLLSNMHAKARKWDGVVKIRKLMKERNIK 566

Query: 477 SE 478
            E
Sbjct: 567 KE 568


>gi|222612904|gb|EEE51036.1| hypothetical protein OsJ_31684 [Oryza sativa Japonica Group]
          Length = 637

 Score =  424 bits (1090), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 213/544 (39%), Positives = 326/544 (59%), Gaps = 1/544 (0%)

Query: 241 FHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFR 300
           F   V++   L+  Y KCG V  A  +F  +   D+ S  ++I+GY  N   + +L L  
Sbjct: 95  FAGSVFLDNSLIHLYCKCGAVADARRVFDGMPARDMCSWTSLIAGYAQNDMPDEALGLLP 154

Query: 301 QLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLN 360
            +L    + N  T   L+          +   IH+  +K     +  V +AL  +Y+R  
Sbjct: 155 GMLRGRFKPNGFTFASLLKAAGASASSGIGEQIHALTVKYDWHDDVYVGSALLDMYARCG 214

Query: 361 EMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILS 420
            M+ A  +FD+   K+  SWNA+IAG+ + G  E  + +F EMQ +       T SS+ S
Sbjct: 215 RMDMAIAVFDQLESKNGVSWNALIAGFARKGDGETTLLMFAEMQRNGFEATHFTYSSVFS 274

Query: 421 ACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVT 480
           A A +GA+  GKWVH  +       + +V   ++DMYAK G++++AR++FD +  K  VT
Sbjct: 275 AIAGIGALEQGKWVHAHMIKSGERLSAFVGNTILDMYAKSGSMIDARKVFDRVDKKDVVT 334

Query: 481 WNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMI 540
           WN+M++ +  +G G EA+  F EM   G+  + +TFLS+L ACSH GLV+EG + F  M+
Sbjct: 335 WNSMLTAFAQYGLGREAVTHFEEMRKCGVHLNQITFLSILTACSHGGLVKEGKQYFD-MM 393

Query: 541 HDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLA 600
            ++  +P  +HY  +VD+LGRAG L  AL FI  + ++P  AVWGALLG+C +HK+  + 
Sbjct: 394 KEYNLEPEIDHYVTVVDLLGRAGLLNDALVFIFKMPMKPTAAVWGALLGSCRMHKNAKIG 453

Query: 601 RVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGT 660
           + A++ +FELDP++ G  VLL NIY++   +  AA VR+++K   + K P C+ +E+  +
Sbjct: 454 QFAADHVFELDPDDTGPPVLLYNIYASTGQWDAAARVRKMMKATGVKKEPACSWVEIENS 513

Query: 661 PHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKL 720
            H+F + D  HP+S  IY   E+++ ++R+AG+   T   L  V+E+E++  ++ HSEK+
Sbjct: 514 VHMFVANDDTHPRSEEIYKKWEEISIQIRKAGYVPNTDYVLLHVDEQERQAKLQYHSEKI 573

Query: 721 AIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSC 780
           A+AF LI    G  IRI+KN+R+C DCH+A ++ISKV  R IVVRD NRFHHF  G CSC
Sbjct: 574 ALAFALINMPLGATIRIMKNIRICGDCHSAFRYISKVFKREIVVRDTNRFHHFSSGSCSC 633

Query: 781 GDYW 784
           GDYW
Sbjct: 634 GDYW 637



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 100/363 (27%), Positives = 183/363 (50%), Gaps = 2/363 (0%)

Query: 130 LHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCC 189
           +H H   S +   +F+  +L+ LY K   V  AR+VFD MP +D   W S+I+G  +N  
Sbjct: 86  IHAHLAGSQFAGSVFLDNSLIHLYCKCGAVADARRVFDGMPARDMCSWTSLIAGYAQNDM 145

Query: 190 FQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLT 249
             +++ +   M+R G    +  + A++L A        +G +I  L +K  +HD VYV +
Sbjct: 146 PDEALGLLPGMLR-GRFKPNGFTFASLLKAAGASASSGIGEQIHALTVKYDWHDDVYVGS 204

Query: 250 GLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERV 309
            L+  Y++CG ++ A  +F  +   + +S NA+I+G+   G  E++L +F ++  +    
Sbjct: 205 ALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGDGETTLLMFAEMQRNGFEA 264

Query: 310 NSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLF 369
              T   +       G L     +H+  +KSG   ++ V   +  +Y++   M  ARK+F
Sbjct: 265 THFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNTILDMYAKSGSMIDARKVF 324

Query: 370 DESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAIS 429
           D   +K + +WN+M+  + Q GL  EA++ F+EM+   V  N +T  SIL+AC+  G + 
Sbjct: 325 DRVDKKDVVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHLNQITFLSILTACSHGGLVK 384

Query: 430 LGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARE-LFDLMSHKSEVTWNTMISGY 488
            GK   +++K  N E  I     ++D+  + G + +A   +F +    +   W  ++   
Sbjct: 385 EGKQYFDMMKEYNLEPEIDHYVTVVDLLGRAGLLNDALVFIFKMPMKPTAAVWGALLGSC 444

Query: 489 GLH 491
            +H
Sbjct: 445 RMH 447



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 71/238 (29%), Positives = 121/238 (50%), Gaps = 4/238 (1%)

Query: 303 LASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEM 362
           LA+  R+  S    LI     +  L     IH+    S    +  +  +L  +Y +   +
Sbjct: 60  LAATPRLYHS----LITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAV 115

Query: 363 EAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSAC 422
             AR++FD    + + SW ++IAGY QN + +EA+ L   M   +  PN  T +S+L A 
Sbjct: 116 ADARRVFDGMPARDMCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAA 175

Query: 423 AQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWN 482
               +  +G+ +H L    ++  ++YV +AL+DMYA+CG +  A  +FD +  K+ V+WN
Sbjct: 176 GASASSGIGEQIHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWN 235

Query: 483 TMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMI 540
            +I+G+   G G   L +F+EM  +G   +  T+ SV  A +  G + +G  +   MI
Sbjct: 236 ALIAGFARKGDGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMI 293



 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 77/339 (22%), Positives = 155/339 (45%), Gaps = 17/339 (5%)

Query: 5   TPQSRNLFLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALF 64
           TP+  +  ++     ++       HA +    F   +     L H      A   AR +F
Sbjct: 63  TPRLYHSLITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVADARRVF 122

Query: 65  FSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDR 124
             +P  D+  +  +I G++ N+MP  ++     + +     P+ FT++ +L AA A    
Sbjct: 123 DGMPARDMCSWTSLIAGYAQNDMPDEALGLLPGMLRGR-FKPNGFTFASLLKAAGASASS 181

Query: 125 SIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGL 184
            IG  +H   +   +  D++VG+AL+D+Y +   +  A  VFD++  K+ V WN++I+G 
Sbjct: 182 GIGEQIHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGF 241

Query: 185 MKNCCFQDSIWVFGDMVRNGGTWLDST--SVAAVLPAVAEVQELRLGMEIQCLGLKLGFH 242
            +    + ++ +F +M RNG    ++T  + ++V  A+A +  L  G  +    +K G  
Sbjct: 242 ARKGDGETTLLMFAEMQRNG---FEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGER 298

Query: 243 DHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQL 302
              +V   ++  Y+K G +  A  +F  + + D+++ N+M++ +   G    ++  F ++
Sbjct: 299 LSAFVGNTILDMYAKSGSMIDARKVFDRVDKKDVVTWNSMLTAFAQYGLGREAVTHFEEM 358

Query: 303 LASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSG 341
                 +N  T + +           LT C H   +K G
Sbjct: 359 RKCGVHLNQITFLSI-----------LTACSHGGLVKEG 386



 Score = 86.3 bits (212), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 51/193 (26%), Positives = 96/193 (49%), Gaps = 10/193 (5%)

Query: 400 FQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAK 459
              + A ++A  P    S+++ACA+  ++   + +H  +    F  ++++  +LI +Y K
Sbjct: 52  LDSVDARELAATPRLYHSLITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCK 111

Query: 460 CGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSV 519
           CG + +AR +FD M  +   +W ++I+GY  +    EAL L   ML    +P+G TF S+
Sbjct: 112 CGAVADARRVFDGMPARDMCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASL 171

Query: 520 LYACSHAGLVREGDEIFQSMI----HDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGL 575
           L A   +     G++I    +    HD  +   A     ++D+  R G+++ A+     L
Sbjct: 172 LKAAGASASSGIGEQIHALTVKYDWHDDVYVGSA-----LLDMYARCGRMDMAIAVFDQL 226

Query: 576 AVEPGPAVWGALL 588
             + G + W AL+
Sbjct: 227 ESKNGVS-WNALI 238


>gi|356529928|ref|XP_003533538.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
           chloroplastic-like [Glycine max]
          Length = 690

 Score =  424 bits (1090), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 221/548 (40%), Positives = 329/548 (60%), Gaps = 7/548 (1%)

Query: 240 GFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLF 299
           GF   +YV+  ++  + KCG +  A  LF ++   D+ S   MI G+  +G    +  LF
Sbjct: 147 GFEPDLYVMNRVLFVHVKCGLMLDARKLFDEMPEKDMASWMTMIGGFVDSGNFSEAFGLF 206

Query: 300 RQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRL 359
             +        S T   +I      G + +   IHS  LK G+  ++ V  AL  +YS+ 
Sbjct: 207 LCMWEEFNDGRSRTFTTMIRASAGLGLVQVGRQIHSCALKRGVGDDTFVSCALIDMYSKC 266

Query: 360 NEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSIL 419
             +E A  +FD+  EK+   WN++IA Y  +G +EEA+S + EM+ S    +  T+S ++
Sbjct: 267 GSIEDAHCVFDQMPEKTTVGWNSIIASYALHGYSEEALSFYYEMRDSGAKIDHFTISIVI 326

Query: 420 SACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEV 479
             CA+L ++   K  H  +  R ++++I  +TAL+D Y+K G + +A  +F+ M  K+ +
Sbjct: 327 RICARLASLEYAKQAHAALVRRGYDTDIVANTALVDFYSKWGRMEDAWHVFNRMRRKNVI 386

Query: 480 TWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSM 539
           +WN +I+GYG HG G EA+++F +ML  G+ P+ VTFL+VL ACS++GL   G EIF SM
Sbjct: 387 SWNALIAGYGNHGQGEEAVEMFEQMLREGMIPNHVTFLAVLSACSYSGLSERGWEIFYSM 446

Query: 540 IHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNL 599
             DH  KP A HYACMV++LGR G L++A E I+    +P   +W  LL AC +H++  L
Sbjct: 447 SRDHKVKPRAMHYACMVELLGREGLLDEAYELIRSAPFKPTTNMWATLLTACRMHENLEL 506

Query: 600 ARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGG 659
            ++A+E L+ ++PE +  +++L N+Y++     +AA V Q +K++ L   P CT IEV  
Sbjct: 507 GKLAAENLYGMEPEKLCNYIVLLNLYNSSGKLKEAAGVLQTLKRKGLRMLPACTWIEVKK 566

Query: 660 TPHVFTSGDQLHPQSTAIYAMLEKLNGKMREA---GFQTETVTALHDVEEEEKELMMKVH 716
             + F  GD+ H Q+  IY   EK+N  M E    G+  E    L DV+EEE+ + +K H
Sbjct: 567 QSYAFLCGDKSHSQTKEIY---EKVNNMMVEISRHGYVEENKALLPDVDEEEQRI-LKYH 622

Query: 717 SEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGG 776
           SEKLAIAFGLI T   T ++I +  RVC DCH+A KFI+ VTGR IVVRDA+RFHHF+ G
Sbjct: 623 SEKLAIAFGLINTPHWTPLQITQGHRVCGDCHSAIKFIAMVTGREIVVRDASRFHHFRDG 682

Query: 777 VCSCGDYW 784
            CSCGDYW
Sbjct: 683 SCSCGDYW 690



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 112/413 (27%), Positives = 206/413 (49%), Gaps = 12/413 (2%)

Query: 133 HAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQD 192
           + + SG+  DL+V   ++ ++ K   +  ARK+FD+MPEKD   W +MI G + +  F +
Sbjct: 142 YMVNSGFEPDLYVMNRVLFVHVKCGLMLDARKLFDEMPEKDMASWMTMIGGFVDSGNFSE 201

Query: 193 SIWVFGDMVR--NGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTG 250
           +  +F  M    N G    S +   ++ A A +  +++G +I    LK G  D  +V   
Sbjct: 202 AFGLFLCMWEEFNDGR---SRTFTTMIRASAGLGLVQVGRQIHSCALKRGVGDDTFVSCA 258

Query: 251 LVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVN 310
           L+  YSKCG +E A  +F  +     +  N++I+ Y  +G +E +L  + ++  S  +++
Sbjct: 259 LIDMYSKCGSIEDAHCVFDQMPEKTTVGWNSIIASYALHGYSEEALSFYYEMRDSGAKID 318

Query: 311 SSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFD 370
             TI  +I +      L      H+  ++ G  ++    TAL   YS+   ME A  +F+
Sbjct: 319 HFTISIVIRICARLASLEYAKQAHAALVRRGYDTDIVANTALVDFYSKWGRMEDAWHVFN 378

Query: 371 ESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISL 430
               K++ SWNA+IAGY  +G  EEA+ +F++M    + PN VT  ++LSAC+  G    
Sbjct: 379 RMRRKNVISWNALIAGYGNHGQGEEAVEMFEQMLREGMIPNHVTFLAVLSACSYSGLSER 438

Query: 431 GKW--VHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVT-WNTMISG 487
           G W   + + +    +        ++++  + G + EA EL      K     W T+++ 
Sbjct: 439 G-WEIFYSMSRDHKVKPRAMHYACMVELLGREGLLDEAYELIRSAPFKPTTNMWATLLTA 497

Query: 488 YGLHGHGLEALQLFSEMLHSGIRPSGV-TFLSVLYACSHAGLVREGDEIFQSM 539
             +H   LE  +L +E L+ G+ P  +  ++ +L   + +G ++E   + Q++
Sbjct: 498 CRMH-ENLELGKLAAENLY-GMEPEKLCNYIVLLNLYNSSGKLKEAAGVLQTL 548



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 100/339 (29%), Positives = 154/339 (45%), Gaps = 36/339 (10%)

Query: 288 CNGKTESSLRLFR--QLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSN 345
           CN +   ++ LF   +L      V  ST   L+        +     + ++ + SG   +
Sbjct: 93  CN-RYREAMELFEILELEHDGFDVGGSTYDALVSACVGLRSIRGVKRVFNYMVNSGFEPD 151

Query: 346 SSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQA 405
             V+  +  V+ +   M  ARKLFDE  EK +ASW  MI G+  +G   EA  LF  M  
Sbjct: 152 LYVMNRVLFVHVKCGLMLDARKLFDEMPEKDMASWMTMIGGFVDSGNFSEAFGLFLCMWE 211

Query: 406 SKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVE 465
                   T ++++ A A LG + +G+ +H     R    + +VS ALIDMY+KCG+I +
Sbjct: 212 EFNDGRSRTFTTMIRASAGLGLVQVGRQIHSCALKRGVGDDTFVSCALIDMYSKCGSIED 271

Query: 466 ARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYAC-- 523
           A  +FD M  K+ V WN++I+ Y LHG+  EAL  + EM  SG +    T   V+  C  
Sbjct: 272 AHCVFDQMPEKTTVGWNSIIASYALHGYSEEALSFYYEMRDSGAKIDHFTISIVIRICAR 331

Query: 524 ---------SHAGLVREG---DEIFQSMIHD------------HGFKPLAEH----YACM 555
                    +HA LVR G   D +  + + D            H F  +       +  +
Sbjct: 332 LASLEYAKQAHAALVRRGYDTDIVANTALVDFYSKWGRMEDAWHVFNRMRRKNVISWNAL 391

Query: 556 VDILGRAGQLEKALEFIKGLAVE---PGPAVWGALLGAC 591
           +   G  GQ E+A+E  + +  E   P    + A+L AC
Sbjct: 392 IAGYGNHGQGEEAVEMFEQMLREGMIPNHVTFLAVLSAC 430



 Score = 69.7 bits (169), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 44/178 (24%), Positives = 83/178 (46%), Gaps = 1/178 (0%)

Query: 27  QTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNE 86
           Q H+  +  G  +D      L    S   +   A  +F  +P+     +N II  ++ + 
Sbjct: 239 QIHSCALKRGVGDDTFVSCALIDMYSKCGSIEDAHCVFDQMPEKTTVGWNSIIASYALHG 298

Query: 87  MPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVG 146
             + ++ FY  +R + A   D+FT S V+   +           H   +  GY +D+   
Sbjct: 299 YSEEALSFYYEMRDSGA-KIDHFTISIVIRICARLASLEYAKQAHAALVRRGYDTDIVAN 357

Query: 147 AALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNG 204
            ALVD Y K+  ++ A  VF++M  K+ + WN++I+G   +   ++++ +F  M+R G
Sbjct: 358 TALVDFYSKWGRMEDAWHVFNRMRRKNVISWNALIAGYGNHGQGEEAVEMFEQMLREG 415


>gi|15233590|ref|NP_193861.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207660|sp|Q9STE1.1|PP333_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g21300
 gi|3402749|emb|CAA20195.1| putative protein [Arabidopsis thaliana]
 gi|7268926|emb|CAB79129.1| putative protein [Arabidopsis thaliana]
 gi|332659037|gb|AEE84437.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 857

 Score =  424 bits (1089), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 234/673 (34%), Positives = 380/673 (56%), Gaps = 15/673 (2%)

Query: 43  TVTKLAHRLSDFKATCYARA------------LFFSIPKPDLFLFNVIIRGFSNNEMPKS 90
           TV+ L    ++F A+   +A            LF  + + D  ++NV++ G++      S
Sbjct: 163 TVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDS 222

Query: 91  SICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALV 150
            I  ++ +R +  ++P+  T+  VLS  ++     +GV LHG  +VSG   +  +  +L+
Sbjct: 223 VIKGFSVMRMDQ-ISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLL 281

Query: 151 DLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDS 210
            +Y K      A K+F  M   DTV WN MISG +++   ++S+  F +M+ + G   D+
Sbjct: 282 SMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMI-SSGVLPDA 340

Query: 211 TSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRD 270
            + +++LP+V++ + L    +I C  ++      +++ + L+  Y KC  V  A+ +F  
Sbjct: 341 ITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQ 400

Query: 271 IVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLT 330
               D++   AMISGY  NG    SL +FR L+      N  T+V ++PV      L L 
Sbjct: 401 CNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLG 460

Query: 331 NCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQN 390
             +H F +K G  +  ++  A+  +Y++   M  A ++F+  S++ + SWN+MI    Q+
Sbjct: 461 RELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQS 520

Query: 391 GLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVS 450
                AI +F++M  S +  + V++S+ LSACA L + S GK +H  +   +  S++Y  
Sbjct: 521 DNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSE 580

Query: 451 TALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLH-SGI 509
           + LIDMYAKCGN+  A  +F  M  K+ V+WN++I+  G HG   ++L LF EM+  SGI
Sbjct: 581 STLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGI 640

Query: 510 RPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKAL 569
           RP  +TFL ++ +C H G V EG   F+SM  D+G +P  EHYAC+VD+ GRAG+L +A 
Sbjct: 641 RPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAY 700

Query: 570 EFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAER 629
           E +K +   P   VWG LLGAC +HK+  LA VAS KL +LDP N GY+VL+SN ++  R
Sbjct: 701 ETVKSMPFPPDAGVWGTLLGACRLHKNVELAEVASSKLMDLDPSNSGYYVLISNAHANAR 760

Query: 630 DYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMR 689
           ++     VR ++K+R++ K PG + IE+    H+F SGD  HP+S+ IY++L  L G++R
Sbjct: 761 EWESVTKVRSLMKEREVQKIPGYSWIEINKRTHLFVSGDVNHPESSHIYSLLNSLLGELR 820

Query: 690 EAGFQTETVTALH 702
             G+  +    LH
Sbjct: 821 LEGYIPQPYLPLH 833



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 55/205 (26%), Positives = 100/205 (48%), Gaps = 2/205 (0%)

Query: 333 IHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFD--ESSEKSLASWNAMIAGYTQN 390
           +H+F + + I  +S     +  +Y+         K+F   +    S+  WN++I+ + +N
Sbjct: 57  VHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRRSSIRPWNSIISSFVRN 116

Query: 391 GLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVS 450
           GL  +A++ + +M    V+P+  T   ++ AC  L       ++ + V S   + N +V+
Sbjct: 117 GLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDFLSDTVSSLGMDCNEFVA 176

Query: 451 TALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIR 510
           ++LI  Y + G I    +LFD +  K  V WN M++GY   G     ++ FS M    I 
Sbjct: 177 SSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQIS 236

Query: 511 PSGVTFLSVLYACSHAGLVREGDEI 535
           P+ VTF  VL  C+   L+  G ++
Sbjct: 237 PNAVTFDCVLSVCASKLLIDLGVQL 261



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 34/115 (29%), Positives = 57/115 (49%), Gaps = 4/115 (3%)

Query: 412 PVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELF- 470
           P  +S +L AC+    +  GK VH  +   +   + Y    ++ MYA CG+  +  ++F 
Sbjct: 35  PRRLSLLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFY 94

Query: 471 --DLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYAC 523
             DL    S   WN++IS +  +G   +AL  + +ML  G+ P   TF  ++ AC
Sbjct: 95  RLDL-RRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKAC 148


>gi|297739749|emb|CBI29931.3| unnamed protein product [Vitis vinifera]
          Length = 838

 Score =  424 bits (1089), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 258/828 (31%), Positives = 410/828 (49%), Gaps = 57/828 (6%)

Query: 12  FLSLLKGAKTQSQL---TQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIP 68
           +L L +G      L    + HA+I   GF  +    ++L            A  LF  IP
Sbjct: 13  YLWLFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGEVDNAIKLFDDIP 72

Query: 69  KPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASAC-CDRSIG 127
             ++  +N +I G    ++    +  ++ L     +TPD  T++ VL A S       + 
Sbjct: 73  SSNVSFWNKVISGLLAKKLASQVLGLFS-LMITENVTPDESTFASVLRACSGGKAPFQVT 131

Query: 128 VLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKN 187
             +H   I  G+GS   V   L+DLY K   V  A+ VF+++  KD+V W +MISGL +N
Sbjct: 132 EQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSVSWVAMISGLSQN 191

Query: 188 CCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYV 247
               ++I +F  M ++          ++VL A  +++  +LG ++    +K G     +V
Sbjct: 192 GREDEAILLFCQMHKSA-VIPTPYVFSSVLSACTKIELFKLGEQLHGFIVKWGLSSETFV 250

Query: 248 LTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAE 307
              LV+ YS+ G +  AE +F  + R D IS N++ISG    G ++ +L+LF ++     
Sbjct: 251 CNALVTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRGFSDRALQLFEKMQLDCM 310

Query: 308 RVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARK 367
           + +  T+  L+      G  +    +HS+ +K G+ S+  +  +L  +Y +  ++E A +
Sbjct: 311 KPDCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDLYVKCFDIETAHE 370

Query: 368 LFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGA 427
            F  +  +++  WN M+  Y Q G   E+  +F +MQ   + PN  T  SIL  C  LGA
Sbjct: 371 YFLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTYPSILRTCTSLGA 430

Query: 428 ISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISG 487
           + LG+ +H  V    F+ N+YV + LIDMYAK G +  AR +   +  +  V+W  MI+G
Sbjct: 431 LDLGEQIHTQVIKSGFQFNVYVCSVLIDMYAKHGELDTARGILQRLREEDVVSWTAMIAG 490

Query: 488 YGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEI------------ 535
           Y  H    EAL+LF EM + GIR   + F S + AC+    + +G +I            
Sbjct: 491 YTQHDLFAEALKLFQEMENQGIRSDNIGFSSAISACAGIQALNQGQQIHAQSYISGYSED 550

Query: 536 ---------------------------------------FQSMIHDHGFKPLAEHYACMV 556
                                                  + +MI  +           + 
Sbjct: 551 LSIGNALASNVLITLYSKCGSIEDAKREFFEMPEKNVVSWNAMITGYSQHGYGSEAVSLF 610

Query: 557 DILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVG 616
           + + + G +   + F+  + +EP   +W  LL AC +HK+  +   A+  L EL+PE+  
Sbjct: 611 EEMKQLGLMPNHVTFVGEMPIEPDAMIWRTLLSACTVHKNIEIGEFAARHLLELEPEDSA 670

Query: 617 YHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTA 676
            +VLLSN+Y+    +      RQ++K R + K PG + IEV  + H F  GD+LHP +  
Sbjct: 671 TYVLLSNMYAVSGKWDYRDRTRQMMKDRGVKKEPGRSWIEVKNSIHAFFVGDRLHPLAEQ 730

Query: 677 IYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIR 736
           IY  ++ LN +  E G+  +    L+DVE+E+K+    +HSEKLA+AFGL++      IR
Sbjct: 731 IYEYIDDLNERAGEIGYVQDRYNLLNDVEQEQKDPTAYIHSEKLAVAFGLLSLTNTMPIR 790

Query: 737 IIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           +IKNLRVC DCH   KF+SK++ R IVVRDA RFHHF+GGVCSC DYW
Sbjct: 791 VIKNLRVCNDCHNWIKFVSKISNRAIVVRDAYRFHHFEGGVCSCKDYW 838



 Score =  106 bits (265), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 78/265 (29%), Positives = 127/265 (47%), Gaps = 14/265 (5%)

Query: 308 RVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARK 367
           R N  T + L    +  G L     +H+   KSG      + + L  +Y    E++ A K
Sbjct: 7   RANVQTYLWLFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGEVDNAIK 66

Query: 368 LFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGA 427
           LFD+    +++ WN +I+G     L  + + LF  M    V P+  T +S+L AC+   A
Sbjct: 67  LFDDIPSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRACSGGKA 126

Query: 428 -ISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMIS 486
              + + +H  +    F S+  V   LID+Y+K G++  A+ +F+ +  K  V+W  MIS
Sbjct: 127 PFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSVSWVAMIS 186

Query: 487 GYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGF- 545
           G   +G   EA+ LF +M  S + P+   F SVL AC+   L + G+++       HGF 
Sbjct: 187 GLSQNGREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQL-------HGFI 239

Query: 546 ---KPLAEHYAC--MVDILGRAGQL 565
                 +E + C  +V +  R G L
Sbjct: 240 VKWGLSSETFVCNALVTLYSRWGNL 264



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 56/223 (25%), Positives = 89/223 (39%), Gaps = 34/223 (15%)

Query: 403 MQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGN 462
           M+   +  N  T   +   C   G++   K +H  +    F+    + + LID+Y   G 
Sbjct: 1   MEERGIRANVQTYLWLFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGE 60

Query: 463 IVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYA 522
           +  A +LFD +   +   WN +ISG        + L LFS M+   + P   TF SVL A
Sbjct: 61  VDNAIKLFDDIPSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRA 120

Query: 523 CSHAGLVREGDEIFQSMIHDHGF-------KPLAEHYA---------------------- 553
           CS      +  E   + I  HGF        PL + Y+                      
Sbjct: 121 CSGGKAPFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSVS 180

Query: 554 --CMVDILGRAGQLEKALEFIKGL---AVEPGPAVWGALLGAC 591
              M+  L + G+ ++A+     +   AV P P V+ ++L AC
Sbjct: 181 WVAMISGLSQNGREDEAILLFCQMHKSAVIPTPYVFSSVLSAC 223


>gi|224069617|ref|XP_002303012.1| predicted protein [Populus trichocarpa]
 gi|222844738|gb|EEE82285.1| predicted protein [Populus trichocarpa]
          Length = 815

 Score =  424 bits (1089), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 273/820 (33%), Positives = 413/820 (50%), Gaps = 41/820 (5%)

Query: 1   MSMKTPQS-RNLFLSLLKGAKTQSQL-TQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATC 58
           M +K P   R   L  L GA ++  L T   A+I+  GF    S    +   LS+    C
Sbjct: 1   MKVKAPPPFRANQLKTLHGASSRQTLQTCIDARIVKTGFDPITSRFNFMIKDLSERGQLC 60

Query: 59  YARALFFSIPKPDLFLFNVIIRGF--SNNEMPKSSICFYTHLRKNTALT----------- 105
            AR L   +P  + F  ++II G+  S N      I   T  R   A T           
Sbjct: 61  QARQLLDQMPNRNSFSIDIIISGYVKSGNLTVARRIFDDTDERTVVAWTTMIGAYSKSNR 120

Query: 106 -----------------PDNFTYSFVLSAASACCDRSIGV-LLHGHAIVSGYGSDL--FV 145
                            PD  TY  +L+    C D  +   L   HA +   G  L   V
Sbjct: 121 FGDAFKLFAEMHRSGSQPDYVTYITLLTG---CNDLEVAKELYQAHAQIVKLGHHLNHRV 177

Query: 146 GAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGG 205
              L+D YFK   + SAR++F +M   D+V +N MI+G   N   +++I +F +M +N G
Sbjct: 178 CNTLLDSYFKTGGLDSARRLFLEMCGWDSVSFNVMITGYANNGLNEEAIELFVEM-QNLG 236

Query: 206 TWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAE 265
                 + AAV+ A   + +   G +I    +K  F  +V+V    + FYSK   V    
Sbjct: 237 FKPSDFTFAAVISASVGLDDTAFGQQIHGFVVKTSFIRNVFVGNAFLDFYSKHDCVNEVR 296

Query: 266 LLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFG 325
            LF ++   D +S N +I+ Y   GK + S+ LF++L  +     +     ++ +     
Sbjct: 297 KLFNEMPELDGVSYNVIITAYAWVGKVKESIDLFQELQFTTFDRKNFPFPTMLSIAASSL 356

Query: 326 HLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIA 385
            L +   +H+  + S    +  V  +L  +Y++  + E A ++F   S +S   W AMI+
Sbjct: 357 DLQMGRQLHAQVVVSMADPDFRVSNSLVDMYAKCGKFEEADRIFLRLSSRSTVPWTAMIS 416

Query: 386 GYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFES 445
              Q GL E  + LF EM+ + V+ +  T + +L A A L +I LGK +H  V    F  
Sbjct: 417 ANVQRGLHENGLKLFYEMRRANVSADQATFACVLKASANLASILLGKQLHSCVIRSGF-M 475

Query: 446 NIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEML 505
           N+Y   AL+DMYA C +I +A + F+ MS ++ VTWN ++S Y  +G G   L+ F EM+
Sbjct: 476 NVYSGCALLDMYANCASIKDAIKTFEEMSERNVVTWNALLSAYAQNGDGKGTLKSFEEMI 535

Query: 506 HSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQL 565
            SG +P  V+FL +L ACSH  LV EG + F  M   +   P  EHY  MVD L R+G+ 
Sbjct: 536 MSGYQPDSVSFLCILTACSHCRLVEEGLKYFNDMSGVYNLAPKREHYTAMVDALCRSGRF 595

Query: 566 EKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDP-ENVGYHVLLSNI 624
           ++A + +  +  EP   VW ++L +C IHK+  LAR A+ +LF +    +   +V +SNI
Sbjct: 596 DEAEKLMGQMPFEPDEIVWTSVLNSCRIHKNYALARKAAGQLFNMKVLRDAAPYVTMSNI 655

Query: 625 YSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKL 684
           ++    +     V++ ++ R + K P  + +E+    HVF++ D  HPQ   I   +E L
Sbjct: 656 FAEAGQWDSVVKVKKAMRDRGVRKLPAYSWVEIKHKVHVFSANDDKHPQQLEILRKIEML 715

Query: 685 NGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVC 744
             +M + G+  +   A  +V++E K   +K HSE+LAIAF LI T  G+ I ++KNLR C
Sbjct: 716 AEQMEKEGYDPDISCAHQNVDKESKIDSLKYHSERLAIAFALINTPEGSPILVMKNLRAC 775

Query: 745 LDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
            DCH A K ISK+ GR I VRD+NRFHHF+ G CSCGDYW
Sbjct: 776 TDCHAAIKVISKIVGREITVRDSNRFHHFRDGSCSCGDYW 815


>gi|357115175|ref|XP_003559367.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like [Brachypodium distachyon]
          Length = 849

 Score =  424 bits (1089), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 232/679 (34%), Positives = 385/679 (56%), Gaps = 8/679 (1%)

Query: 20  KTQSQLTQTHAQIIIH------GFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLF 73
           K+ + L   H   ++H      G   D+   + L    +D      AR +F  + + D  
Sbjct: 155 KSCAALGALHLGRLVHRTTRALGLDRDMYVGSALIKMYADAGLLDGAREVFDGMDERDCV 214

Query: 74  LFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGH 133
           L+NV++ G+       S++  +  +R  +   P+  T +  LS  +A  D   GV LH  
Sbjct: 215 LWNVMMDGYVKAGDVASAVGLFRVMRA-SGCDPNFATLACFLSVCAAEADLLSGVQLHTL 273

Query: 134 AIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDS 193
           A+  G   ++ V   LV +Y K   ++ A ++F  MP  D V WN MISG ++N    D+
Sbjct: 274 AVKYGLEPEVAVANTLVSMYAKCQCLEEAWRLFGLMPRDDLVTWNGMISGCVQNGLVDDA 333

Query: 194 IWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVS 253
           + +F DM ++G    DS ++A++LPA+ E+   + G EI    ++   H  V++++ LV 
Sbjct: 334 LRLFCDMQKSG-LQPDSVTLASLLPALTELNGFKQGKEIHGYIVRNCAHVDVFLVSALVD 392

Query: 254 FYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSST 313
            Y KC +V  A+ +F      D++  + MISGY  N  +E+++++FR LLA   + N+  
Sbjct: 393 IYFKCRDVRMAQNVFDATKSIDVVIGSTMISGYVLNRMSEAAVKMFRYLLALGIKPNAVM 452

Query: 314 IVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESS 373
           +   +P       + +   +H + LK+       V +AL  +YS+   ++ +  +F + S
Sbjct: 453 VASTLPACASMAAMRIGQELHGYVLKNAYEGRCYVESALMDMYSKCGRLDLSHYMFSKMS 512

Query: 374 EKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKW 433
            K   +WN+MI+ + QNG  EEA+ LF++M    V  N VT+SSILSACA L AI  GK 
Sbjct: 513 AKDEVTWNSMISSFAQNGEPEEALDLFRQMIMEGVKYNNVTISSILSACAGLPAIYYGKE 572

Query: 434 VHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGH 493
           +H ++      ++++  +ALIDMY KCGN+  A  +F+ M  K+EV+WN++IS YG HG 
Sbjct: 573 IHGIIIKGPIRADLFAESALIDMYGKCGNLELALRVFEHMPEKNEVSWNSIISAYGAHGL 632

Query: 494 GLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYA 553
             E++ L   M   G +   VTFL+++ AC+HAG V+EG  +F+ M  ++  +P  EH +
Sbjct: 633 VKESVDLLCCMQEEGFKADHVTFLALISACAHAGQVQEGLRLFRCMTEEYHIEPQVEHLS 692

Query: 554 CMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPE 613
           CMVD+  RAG+L+KA++FI  +  +P   +WGALL AC +H++  LA +AS++LF+LDP 
Sbjct: 693 CMVDLYSRAGKLDKAMQFIADMPFKPDAGIWGALLHACRVHRNVELAEIASQELFKLDPH 752

Query: 614 NVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQ 673
           N GY+VL+SNI +    +   + +R+++K +K+ K PG + ++V  T H+F + D+ HP 
Sbjct: 753 NCGYYVLMSNINAVAGRWDGVSKMRRLMKDKKVQKIPGYSWVDVNNTSHLFVAADKNHPD 812

Query: 674 STAIYAMLEKLNGKMREAG 692
           S  IY  L+ L  ++++ G
Sbjct: 813 SEEIYMSLKSLIIELKQEG 831



 Score =  274 bits (700), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 184/601 (30%), Positives = 301/601 (50%), Gaps = 27/601 (4%)

Query: 12  FLSLLKGAKTQSQLT---QTHAQIIIHGF-----------QNDLSTVTKLAHRLSDFKAT 57
            L+LL+G    S L    + HA+ +  G            Q  L  +  LA R  D    
Sbjct: 39  LLALLRGCVAPSHLPLGLRIHARAVTSGLLDAAGPGPAALQTRLVGMYVLARRFRD---- 94

Query: 58  CYARALFFSIPKPDL---FLFNVIIRGFSNNEMPKSSICFYTHLRKN-TALTPDNFTYSF 113
             A A+F S+P+        +N +IRGF+     + ++ FY  +  + ++  PD  T  +
Sbjct: 95  --AVAVFSSLPRAAAAAALPWNWLIRGFTMAGHHRLAVLFYVKMWAHPSSPRPDGHTLPY 152

Query: 114 VLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKD 173
           V+ + +A     +G L+H      G   D++VG+AL+ +Y     +  AR+VFD M E+D
Sbjct: 153 VVKSCAALGALHLGRLVHRTTRALGLDRDMYVGSALIKMYADAGLLDGAREVFDGMDERD 212

Query: 174 TVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQ 233
            VLWN M+ G +K      ++ +F  M R  G   +  ++A  L   A   +L  G+++ 
Sbjct: 213 CVLWNVMMDGYVKAGDVASAVGLFRVM-RASGCDPNFATLACFLSVCAAEADLLSGVQLH 271

Query: 234 CLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTE 293
            L +K G    V V   LVS Y+KC  +E A  LF  + R DL++ N MISG   NG  +
Sbjct: 272 TLAVKYGLEPEVAVANTLVSMYAKCQCLEEAWRLFGLMPRDDLVTWNGMISGCVQNGLVD 331

Query: 294 SSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALS 353
            +LRLF  +  S  + +S T+  L+P             IH + +++    +  +++AL 
Sbjct: 332 DALRLFCDMQKSGLQPDSVTLASLLPALTELNGFKQGKEIHGYIVRNCAHVDVFLVSALV 391

Query: 354 TVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPV 413
            +Y +  ++  A+ +FD +    +   + MI+GY  N ++E A+ +F+ + A  + PN V
Sbjct: 392 DIYFKCRDVRMAQNVFDATKSIDVVIGSTMISGYVLNRMSEAAVKMFRYLLALGIKPNAV 451

Query: 414 TVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLM 473
            V+S L ACA + A+ +G+ +H  V    +E   YV +AL+DMY+KCG +  +  +F  M
Sbjct: 452 MVASTLPACASMAAMRIGQELHGYVLKNAYEGRCYVESALMDMYSKCGRLDLSHYMFSKM 511

Query: 474 SHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGD 533
           S K EVTWN+MIS +  +G   EAL LF +M+  G++ + VT  S+L AC+    +  G 
Sbjct: 512 SAKDEVTWNSMISSFAQNGEPEEALDLFRQMIMEGVKYNNVTISSILSACAGLPAIYYGK 571

Query: 534 EIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMI 593
           EI   +I       L    A ++D+ G+ G LE AL   + +  E     W +++ A   
Sbjct: 572 EIHGIIIKGPIRADLFAESA-LIDMYGKCGNLELALRVFEHMP-EKNEVSWNSIISAYGA 629

Query: 594 H 594
           H
Sbjct: 630 H 630



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 126/482 (26%), Positives = 240/482 (49%), Gaps = 4/482 (0%)

Query: 12  FLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPD 71
           FLS+           Q H   + +G + +++    L    +  +    A  LF  +P+ D
Sbjct: 254 FLSVCAAEADLLSGVQLHTLAVKYGLEPEVAVANTLVSMYAKCQCLEEAWRLFGLMPRDD 313

Query: 72  LFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLH 131
           L  +N +I G   N +   ++  +  ++K + L PD+ T + +L A +       G  +H
Sbjct: 314 LVTWNGMISGCVQNGLVDDALRLFCDMQK-SGLQPDSVTLASLLPALTELNGFKQGKEIH 372

Query: 132 GHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQ 191
           G+ + +    D+F+ +ALVD+YFK   V+ A+ VFD     D V+ ++MISG + N   +
Sbjct: 373 GYIVRNCAHVDVFLVSALVDIYFKCRDVRMAQNVFDATKSIDVVIGSTMISGYVLNRMSE 432

Query: 192 DSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGL 251
            ++ +F  ++   G   ++  VA+ LPA A +  +R+G E+    LK  +    YV + L
Sbjct: 433 AAVKMFRYLLAL-GIKPNAVMVASTLPACASMAAMRIGQELHGYVLKNAYEGRCYVESAL 491

Query: 252 VSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNS 311
           +  YSKCG ++ +  +F  +   D ++ N+MIS +  NG+ E +L LFRQ++    + N+
Sbjct: 492 MDMYSKCGRLDLSHYMFSKMSAKDEVTWNSMISSFAQNGEPEEALDLFRQMIMEGVKYNN 551

Query: 312 STIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDE 371
            TI  ++        ++    IH   +K  I ++    +AL  +Y +   +E A ++F+ 
Sbjct: 552 VTISSILSACAGLPAIYYGKEIHGIIIKGPIRADLFAESALIDMYGKCGNLELALRVFEH 611

Query: 372 SSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLG 431
             EK+  SWN++I+ Y  +GL +E++ L   MQ      + VT  +++SACA  G +  G
Sbjct: 612 MPEKNEVSWNSIISAYGAHGLVKESVDLLCCMQEEGFKADHVTFLALISACAHAGQVQEG 671

Query: 432 -KWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEV-TWNTMISGYG 489
            +    + +  + E  +   + ++D+Y++ G + +A +    M  K +   W  ++    
Sbjct: 672 LRLFRCMTEEYHIEPQVEHLSCMVDLYSRAGKLDKAMQFIADMPFKPDAGIWGALLHACR 731

Query: 490 LH 491
           +H
Sbjct: 732 VH 733


>gi|147860004|emb|CAN81045.1| hypothetical protein VITISV_006763 [Vitis vinifera]
          Length = 1321

 Score =  423 bits (1088), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 230/654 (35%), Positives = 370/654 (56%), Gaps = 5/654 (0%)

Query: 113 FVLSAASACCDR---SIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKM 169
           +V SA S C       +G   H   +  G GSD FV  +L+D+Y K   V SA +V+DKM
Sbjct: 115 YVFSALSFCGREGCVELGRRWHCFVVKIGLGSDEFVCTSLIDMYAKCGEVDSAVRVYDKM 174

Query: 170 PEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLG 229
              D    N +IS   +N  F  +  VF   + N GT  +  + + +L     +  ++ G
Sbjct: 175 TSLDAATCNCLISAYARNGFFVQAFQVFMQ-IGNMGTRPNHYTYSTMLAVCGTISAIQEG 233

Query: 230 MEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCN 289
            ++    +K+ +     V   L++ YSKCG +E AE++F  + + ++IS  A I+G+  +
Sbjct: 234 KQLHAHVVKMQYLSETAVGNALLTLYSKCGMMEEAEIVFESLRQRNIISWTASINGFYQH 293

Query: 290 GKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVL 349
           G  + +L+ F  +  S    N  T   ++               H+  +K G+ S   V 
Sbjct: 294 GDFKKALKQFSMMRESGIEPNEFTFSIVLASCGCVKDFIDGRMFHTQVIKKGMASGVFVG 353

Query: 350 TALSTVYSRLNEMEAARKLFDESSEK-SLASWNAMIAGYTQNGLTEEAISLFQEMQASKV 408
           TA+  +YS L EM+ A K F +     S  SWNA+IAGY  N   E+A+  F  M    V
Sbjct: 354 TAIIDMYSGLGEMDEAEKQFKQMGRAASNVSWNALIAGYVLNEKIEKAMEAFCRMVKEDV 413

Query: 409 APNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARE 468
           A N  T S+I  AC+   +++    +H  +   N ESN++V+++LI+ Y +CG++  A +
Sbjct: 414 ACNEFTYSNIFKACSSFPSLATTVQIHSRLIKSNVESNLHVASSLIEAYTQCGSLENAVQ 473

Query: 469 LFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGL 528
           +F  +S    V+WN++I  Y  +G   +A+ L  +M+  G +P+  TFL+VL ACSH+GL
Sbjct: 474 VFTQISDADVVSWNSIIKAYSQNGDPWKAIFLLRKMIEEGNKPTSXTFLTVLSACSHSGL 533

Query: 529 VREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALL 588
           V+EG E F+SM+ D+  +P   H +CMVDILGRAGQLE AL+FIK L ++P  ++W  LL
Sbjct: 534 VQEGQEFFKSMVQDYSIQPEETHCSCMVDILGRAGQLENALDFIKKLTMKPTASIWRPLL 593

Query: 589 GACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAK 648
            AC  + +  +A   +EK+ +L+P +   +V LSN+Y+    +  A   R+++++++++K
Sbjct: 594 AACRYNSNLQMAEYVAEKILDLEPNDATVYVTLSNMYAEVGRWADAENQRRLMEQKEISK 653

Query: 649 APGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEE 708
            PGC+ IEV    + F S D+ HP+   +Y  L++L  ++++ G+   T T LH    + 
Sbjct: 654 EPGCSWIEVNNKMYKFFSHDKAHPEMPKVYEKLKQLVRQIQDIGYSPPTTTVLHPESRQP 713

Query: 709 KELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVI 762
           KE ++  HSEKLA+ FGL++  PG  IR++KNLRVCLDC++  K+IS++T R I
Sbjct: 714 KEQLILYHSEKLAVCFGLLSLPPGKPIRVLKNLRVCLDCYSTMKYISRITDRYI 767



 Score =  336 bits (862), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 187/536 (34%), Positives = 293/536 (54%), Gaps = 34/536 (6%)

Query: 123  DRSI--GVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSM 180
            DR++  G  LH H ++ G     +  A L+  Y +   + +ARK+FDK+P  +   W  +
Sbjct: 816  DRALYRGRALHAHLVIIGLARLTYFAAKLMSFYTECGQLSNARKLFDKIPNTNIRRWIVL 875

Query: 181  ISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLG 240
                 +   +++++  F +M + G    +   + ++L A   + + R G  +  + LK  
Sbjct: 876  TGACARRGFYEEALSAFSEMQKEG-LRPNQFVLPSILKACGHLSDRRTGENMHTVILKNS 934

Query: 241  FHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFR 300
            F    Y+++ L+  YSKCG VE+A  +F  IV  DL+  NAM+SGY  +G    +L L +
Sbjct: 935  FESDAYIISALIYMYSKCGHVEKACRVFDWIVDKDLVVMNAMVSGYAQHGFVHEALBLVQ 994

Query: 301  QLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLN 360
            ++  +                                +K  +VS ++++   S V  +  
Sbjct: 995  KMQQAG-------------------------------VKPNVVSWNTLIAGFSQVGDKSM 1023

Query: 361  EMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILS 420
              E  R +     E  + SW ++I+G+ QN    E    F+EM      P+ VT+SS+L 
Sbjct: 1024 VSEVFRLMTANGVEPDVVSWTSVISGFVQNFHNHEGFDAFKEMLDQGFCPSSVTISSLLP 1083

Query: 421  ACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVT 480
            AC  +  +  GK +H        E ++YV +AL+DMYAKCG I EA+ LF +M  ++ VT
Sbjct: 1084 ACTNVANLRHGKEIHGYAMVIGVEKDVYVRSALVDMYAKCGYISEAKILFYMMPERNTVT 1143

Query: 481  WNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMI 540
            WN++I GY  HG+  EA++LF++M  S  +   +TF +VL ACSHAG+V  G+ +F  M 
Sbjct: 1144 WNSLIFGYANHGYCNEAIELFNQMEESDTKLDHLTFTAVLNACSHAGMVELGESLFXKMQ 1203

Query: 541  HDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLA 600
              +  +P  EHYACMVD+LGRAG+L +A + IK + VEP   VWGALLGAC  H +  LA
Sbjct: 1204 EKYRIEPRLEHYACMVDLLGRAGKLSEAYDLIKAMPVEPDKFVWGALLGACRNHGNIELA 1263

Query: 601  RVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIE 656
             VA+E LFEL+PE+ G  +LLSN+Y+    +  AA +++++K+RK  K PGC+ IE
Sbjct: 1264 EVAAEHLFELEPESPGSSLLLSNLYADAGRWGNAAKMKKMMKQRKFGKFPGCSWIE 1319



 Score =  152 bits (385), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 102/390 (26%), Positives = 190/390 (48%), Gaps = 4/390 (1%)

Query: 101 NTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVK 160
           N    P+++TYS +L+          G  LH H +   Y S+  VG AL+ LY K   ++
Sbjct: 207 NMGTRPNHYTYSTMLAVCGTISAIQEGKQLHAHVVKMQYLSETAVGNALLTLYSKCGMME 266

Query: 161 SARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAV 220
            A  VF+ + +++ + W + I+G  ++  F+ ++  F  M+R  G   +  + + VL + 
Sbjct: 267 EAEIVFESLRQRNIISWTASINGFYQHGDFKKALKQF-SMMRESGIEPNEFTFSIVLASC 325

Query: 221 AEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVR-PDLISC 279
             V++   G       +K G    V+V T ++  YS  GE++ AE  F+ + R    +S 
Sbjct: 326 GCVKDFIDGRMFHTQVIKKGMASGVFVGTAIIDMYSGLGEMDEAEKQFKQMGRAASNVSW 385

Query: 280 NAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLK 339
           NA+I+GY  N K E ++  F +++      N  T   +      F  L  T  IHS  +K
Sbjct: 386 NALIAGYVLNEKIEKAMEAFCRMVKEDVACNEFTYSNIFKACSSFPSLATTVQIHSRLIK 445

Query: 340 SGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISL 399
           S + SN  V ++L   Y++   +E A ++F + S+  + SWN++I  Y+QNG   +AI L
Sbjct: 446 SNVESNLHVASSLIEAYTQCGSLENAVQVFTQISDADVVSWNSIIKAYSQNGDPWKAIFL 505

Query: 400 FQEMQASKVAPNPVTVSSILSACAQLGAISLGK-WVHELVKSRNFESNIYVSTALIDMYA 458
            ++M      P   T  ++LSAC+  G +  G+ +   +V+  + +      + ++D+  
Sbjct: 506 LRKMIEEGNKPTSXTFLTVLSACSHSGLVQEGQEFFKSMVQDYSIQPEETHCSCMVDILG 565

Query: 459 KCGNIVEARELFDLMSHKSEVT-WNTMISG 487
           + G +  A +    ++ K   + W  +++ 
Sbjct: 566 RAGQLENALDFIKKLTMKPTASIWRPLLAA 595



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 122/506 (24%), Positives = 229/506 (45%), Gaps = 54/506 (10%)

Query: 29   HAQIIIHGFQNDLSTVTKLAHRLSDFKATC----YARALFFSIPKPDLFLFNVIIRGFSN 84
            HA ++I G    L+ +T  A +L  F   C     AR LF  IP  ++  + V+    + 
Sbjct: 826  HAHLVIIG----LARLTYFAAKLMSFYTECGQLSNARKLFDKIPNTNIRRWIVLTGACAR 881

Query: 85   NEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLF 144
                + ++  ++ ++K   L P+ F    +L A     DR  G  +H   + + + SD +
Sbjct: 882  RGFYEEALSAFSEMQKE-GLRPNQFVLPSILKACGHLSDRRTGENMHTVILKNSFESDAY 940

Query: 145  VGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNG 204
            + +AL+ +Y K   V+ A +VFD + +KD V+ N+M+SG  ++                 
Sbjct: 941  IISALIYMYSKCGHVEKACRVFDWIVDKDLVVMNAMVSGYAQH----------------- 983

Query: 205  GTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERA 264
                       V  A+  VQ+++          + G   +V     L++ +S+ G+    
Sbjct: 984  ---------GFVHEALBLVQKMQ----------QAGVKPNVVSWNTLIAGFSQVGDKSMV 1024

Query: 265  ELLFR----DIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPV 320
              +FR    + V PD++S  ++ISG+  N         F+++L      +S TI  L+P 
Sbjct: 1025 SEVFRLMTANGVEPDVVSWTSVISGFVQNFHNHEGFDAFKEMLDQGFCPSSVTISSLLPA 1084

Query: 321  FYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASW 380
                 +L     IH + +  G+  +  V +AL  +Y++   +  A+ LF    E++  +W
Sbjct: 1085 CTNVANLRHGKEIHGYAMVIGVEKDVYVRSALVDMYAKCGYISEAKILFYMMPERNTVTW 1144

Query: 381  NAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKS 440
            N++I GY  +G   EAI LF +M+ S    + +T +++L+AC+  G + LG+ +   ++ 
Sbjct: 1145 NSLIFGYANHGYCNEAIELFNQMEESDTKLDHLTFTAVLNACSHAGMVELGESLFXKMQE 1204

Query: 441  R-NFESNIYVSTALIDMYAKCGNIVEARELFDLMS-HKSEVTWNTMISGYGLHGHGLEAL 498
            +   E  +     ++D+  + G + EA +L   M     +  W  ++     HG+ +E  
Sbjct: 1205 KYRIEPRLEHYACMVDLLGRAGKLSEAYDLIKAMPVEPDKFVWGALLGACRNHGN-IELA 1263

Query: 499  QLFSEMLH--SGIRPSGVTFLSVLYA 522
            ++ +E L       P     LS LYA
Sbjct: 1264 EVAAEHLFELEPESPGSSLLLSNLYA 1289



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 77/254 (30%), Positives = 130/254 (51%), Gaps = 6/254 (2%)

Query: 297  RLFRQLLASAERV---NSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALS 353
            R++R +  S  R    +S T    I ++     L+    +H+  +  G+   +     L 
Sbjct: 788  RVYRNI--STHRTFQSSSDTYAKAIDMYARDRALYRGRALHAHLVIIGLARLTYFAAKLM 845

Query: 354  TVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPV 413
            + Y+   ++  ARKLFD+    ++  W  +     + G  EEA+S F EMQ   + PN  
Sbjct: 846  SFYTECGQLSNARKLFDKIPNTNIRRWIVLTGACARRGFYEEALSAFSEMQKEGLRPNQF 905

Query: 414  TVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLM 473
             + SIL AC  L     G+ +H ++   +FES+ Y+ +ALI MY+KCG++ +A  +FD +
Sbjct: 906  VLPSILKACGHLSDRRTGENMHTVILKNSFESDAYIISALIYMYSKCGHVEKACRVFDWI 965

Query: 474  SHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGD 533
              K  V  N M+SGY  HG   EAL L  +M  +G++P+ V++ +++   S  G      
Sbjct: 966  VDKDLVVMNAMVSGYAQHGFVHEALBLVQKMQQAGVKPNVVSWNTLIAGFSQVGDKSMVS 1025

Query: 534  EIFQSMIHDHGFKP 547
            E+F+ M  + G +P
Sbjct: 1026 EVFRLMTAN-GVEP 1038



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 94/385 (24%), Positives = 170/385 (44%), Gaps = 45/385 (11%)

Query: 210  STSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFR 269
            S + A  +   A  + L  G  +    + +G     Y    L+SFY++CG++  A  LF 
Sbjct: 803  SDTYAKAIDMYARDRALYRGRALHAHLVIIGLARLTYFAAKLMSFYTECGQLSNARKLFD 862

Query: 270  DIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHL 329
             I   ++     +       G  E +L  F ++     R N   +  ++           
Sbjct: 863  KIPNTNIRRWIVLTGACARRGFYEEALSAFSEMQKEGLRPNQFVLPSILKACGHLSDRRT 922

Query: 330  TNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQ 389
               +H+  LK+   S++ +++AL  +YS+   +E A ++FD   +K L   NAM++GY Q
Sbjct: 923  GENMHTVILKNSFESDAYIISALIYMYSKCGHVEKACRVFDWIVDKDLVVMNAMVSGYAQ 982

Query: 390  NGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYV 449
            +G   EA+ L Q+MQ + V PN V+ +++++  +Q+G  S+   V  L+ +   E ++  
Sbjct: 983  HGFVHEALBLVQKMQQAGVKPNVVSWNTLIAGFSQVGDKSMVSEVFRLMTANGVEPDV-- 1040

Query: 450  STALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGI 509
                                         V+W ++ISG+  + H  E    F EML  G 
Sbjct: 1041 -----------------------------VSWTSVISGFVQNFHNHEGFDAFKEMLDQGF 1071

Query: 510  RPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPL----AEHY--ACMVDILGRAG 563
             PS VT  S+L AC++   +R G EI       HG+  +     + Y  + +VD+  + G
Sbjct: 1072 CPSSVTISSLLPACTNVANLRHGKEI-------HGYAMVIGVEKDVYVRSALVDMYAKCG 1124

Query: 564  QLEKALEFIKGLAVEPGPAVWGALL 588
             + +A + +  +  E     W +L+
Sbjct: 1125 YISEA-KILFYMMPERNTVTWNSLI 1148



 Score = 83.2 bits (204), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 62/237 (26%), Positives = 112/237 (47%), Gaps = 6/237 (2%)

Query: 410 PNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEAREL 469
           P+   V S LS C + G + LG+  H  V      S+ +V T+LIDMYAKCG +  A  +
Sbjct: 111 PHRQYVFSALSFCGREGCVELGRRWHCFVVKIGLGSDEFVCTSLIDMYAKCGEVDSAVRV 170

Query: 470 FDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLV 529
           +D M+     T N +IS Y  +G  ++A Q+F ++ + G RP+  T+ ++L  C     +
Sbjct: 171 YDKMTSLDAATCNCLISAYARNGFFVQAFQVFMQIGNMGTRPNHYTYSTMLAVCGTISAI 230

Query: 530 REGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLG 589
           +EG ++   ++        A   A ++ +  + G +E+A    + L  +     W A + 
Sbjct: 231 QEGKQLHAHVVKMQYLSETAVGNA-LLTLYSKCGMMEEAEIVFESLR-QRNIISWTASIN 288

Query: 590 ACMIHKDTNLARVASEKLFE--LDPENVGYHVLLSNIYSAERDYLQAATVR-QVVKK 643
               H D   A      + E  ++P    + ++L++     +D++       QV+KK
Sbjct: 289 GFYQHGDFKKALKQFSMMRESGIEPNEFTFSIVLASC-GCVKDFIDGRMFHTQVIKK 344


>gi|125601229|gb|EAZ40805.1| hypothetical protein OsJ_25283 [Oryza sativa Japonica Group]
          Length = 492

 Score =  423 bits (1087), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 213/532 (40%), Positives = 316/532 (59%), Gaps = 41/532 (7%)

Query: 254 FYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSST 313
            Y+K G V+ A   F +    D+  CN M++ Y    +   + ++F  +           
Sbjct: 1   MYAKAGRVDLARDAFDEAPLRDVFLCNVMLAAYVSRSEVAEARKVFDGM----------- 49

Query: 314 IVGLIPVFYPFGHLHLTNC-IHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDES 372
                    P   L   N  IH + ++                     E+  AR++FD +
Sbjct: 50  ---------PMRDLVSWNTMIHGYAMR--------------------GEVGLAREIFDGT 80

Query: 373 SEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGK 432
            ++   SW++MI+ Y ++  ++EA+ L++EM A+ + P+ +T+ S++SAC+ LGA+++G 
Sbjct: 81  EDRDAFSWSSMISAYAKSRRSKEALELWREMHAASIIPDCITLVSVVSACSDLGALAVGA 140

Query: 433 WVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHG 492
            VH  V+S   E ++ + TALIDMYAKCG+I  A+ +FD M  K   TW++MI G   HG
Sbjct: 141 EVHRFVESNRIELDLKLGTALIDMYAKCGDIESAQRVFDRMPEKDVQTWSSMIIGLANHG 200

Query: 493 HGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHY 552
            G E+L LFS+M+  G++P+GVTF+ VL AC+H GLV EG + F+SM   HG +P  EHY
Sbjct: 201 LGHESLSLFSKMISEGMKPNGVTFVGVLIACTHVGLVSEGKKYFRSMNEVHGIEPTVEHY 260

Query: 553 ACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDP 612
            CMVD+LGR+G +E+A + I+ +  EP   +W ALLGAC IHK+  +A  A  KL  LDP
Sbjct: 261 GCMVDLLGRSGHVEEARQLIRSMTFEPDTIIWRALLGACRIHKNVEIAEEAMAKLRVLDP 320

Query: 613 ENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHP 672
              G++VLLSNIY+    +   A +R+ +++  + + PG + IE     H F SGD+LHP
Sbjct: 321 LGDGHYVLLSNIYAQANSWEGVAEMRKTIRRDNIQRIPGRSSIEWDEKIHEFVSGDRLHP 380

Query: 673 QSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPG 732
           +S  IY +LE++  ++++AG++  T   L D++E+ KE  +  HSEKLAIAF L+ T   
Sbjct: 381 RSKEIYRVLEEMMDRLKQAGYKPMTGLVLQDIDEQSKERSLAEHSEKLAIAFALLTTPAR 440

Query: 733 TEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           + IRI KNLR C DCH+A K IS V  R ++VRD NRFHHF  G CSC DYW
Sbjct: 441 STIRITKNLRACEDCHSAMKLISLVYDRKLIVRDRNRFHHFSEGQCSCKDYW 492



 Score =  115 bits (288), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 83/342 (24%), Positives = 159/342 (46%), Gaps = 42/342 (12%)

Query: 152 LYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDST 211
           +Y K   V  AR  FD+ P +D  L N M++  +                          
Sbjct: 1   MYAKAGRVDLARDAFDEAPLRDVFLCNVMLAAYVSR------------------------ 36

Query: 212 SVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDI 271
                   VAE +++  GM ++ L               ++  Y+  GEV  A  +F   
Sbjct: 37  ------SEVAEARKVFDGMPMRDL----------VSWNTMIHGYAMRGEVGLAREIFDGT 80

Query: 272 VRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTN 331
              D  S ++MIS Y  + +++ +L L+R++ A++   +  T+V ++      G L +  
Sbjct: 81  EDRDAFSWSSMISAYAKSRRSKEALELWREMHAASIIPDCITLVSVVSACSDLGALAVGA 140

Query: 332 CIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNG 391
            +H F   + I  +  + TAL  +Y++  ++E+A+++FD   EK + +W++MI G   +G
Sbjct: 141 EVHRFVESNRIELDLKLGTALIDMYAKCGDIESAQRVFDRMPEKDVQTWSSMIIGLANHG 200

Query: 392 LTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLG-KWVHELVKSRNFESNIYVS 450
           L  E++SLF +M +  + PN VT   +L AC  +G +S G K+   + +    E  +   
Sbjct: 201 LGHESLSLFSKMISEGMKPNGVTFVGVLIACTHVGLVSEGKKYFRSMNEVHGIEPTVEHY 260

Query: 451 TALIDMYAKCGNIVEARELFDLMSHKSE-VTWNTMISGYGLH 491
             ++D+  + G++ EAR+L   M+ + + + W  ++    +H
Sbjct: 261 GCMVDLLGRSGHVEEARQLIRSMTFEPDTIIWRALLGACRIH 302



 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 72/278 (25%), Positives = 124/278 (44%), Gaps = 5/278 (1%)

Query: 9   RNLFLSLLKGAKTQSQLTQTHAQIIIHGF-QNDLSTVTKLAHRLSDFKATCYARALFFSI 67
           R++FL  +  A   S+     A+ +  G    DL +   + H  +       AR +F   
Sbjct: 21  RDVFLCNVMLAAYVSRSEVAEARKVFDGMPMRDLVSWNTMIHGYAMRGEVGLAREIFDGT 80

Query: 68  PKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIG 127
              D F ++ +I  ++ +   K ++  +  +    ++ PD  T   V+SA S     ++G
Sbjct: 81  EDRDAFSWSSMISAYAKSRRSKEALELWREMHA-ASIIPDCITLVSVVSACSDLGALAVG 139

Query: 128 VLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKN 187
             +H     +    DL +G AL+D+Y K   ++SA++VFD+MPEKD   W+SMI GL  +
Sbjct: 140 AEVHRFVESNRIELDLKLGTALIDMYAKCGDIESAQRVFDRMPEKDVQTWSSMIIGLANH 199

Query: 188 CCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGME-IQCLGLKLGFHDHVY 246
               +S+ +F  M+  G    +  +   VL A   V  +  G +  + +    G    V 
Sbjct: 200 GLGHESLSLFSKMISEGMK-PNGVTFVGVLIACTHVGLVSEGKKYFRSMNEVHGIEPTVE 258

Query: 247 VLTGLVSFYSKCGEVERAELLFRDIV-RPDLISCNAMI 283
               +V    + G VE A  L R +   PD I   A++
Sbjct: 259 HYGCMVDLLGRSGHVEEARQLIRSMTFEPDTIIWRALL 296



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 97/426 (22%), Positives = 167/426 (39%), Gaps = 100/426 (23%)

Query: 142 DLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVF-GDM 200
           D+F+   ++  Y   S V  ARKVFD MP +D V WN+MI G         +  +F G  
Sbjct: 22  DVFLCNVMLAAYVSRSEVAEARKVFDGMPMRDLVSWNTMIHGYAMRGEVGLAREIFDGTE 81

Query: 201 VRNGGTW-----------------------------LDSTSVAAVLPAVAEVQELRLGME 231
            R+  +W                              D  ++ +V+ A +++  L +G E
Sbjct: 82  DRDAFSWSSMISAYAKSRRSKEALELWREMHAASIIPDCITLVSVVSACSDLGALAVGAE 141

Query: 232 IQC--------LGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMI 283
           +          L LKLG        T L+  Y+KCG++E A+ +F  +   D+ + ++MI
Sbjct: 142 VHRFVESNRIELDLKLG--------TALIDMYAKCGDIESAQRVFDRMPEKDVQTWSSMI 193

Query: 284 SGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIV 343
            G   +G    SL LF ++++   + N  T VG+           L  C H      G+V
Sbjct: 194 IGLANHGLGHESLSLFSKMISEGMKPNGVTFVGV-----------LIACTH-----VGLV 237

Query: 344 SNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEM 403
           S           +  +NE+           E ++  +  M+    ++G  EEA  L + M
Sbjct: 238 SEG------KKYFRSMNEVHGI--------EPTVEHYGCMVDLLGRSGHVEEARQLIRSM 283

Query: 404 QASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFE----------SNIYVSTAL 453
                 P+ +   ++L AC     + + +    + K R  +          SNIY     
Sbjct: 284 T---FEPDTIIWRALLGACRIHKNVEIAE--EAMAKLRVLDPLGDGHYVLLSNIYAQANS 338

Query: 454 IDMYAKCGNIVEARELFDLMSHKSEVTWNTMI----SGYGLHGHGLEALQLFSEML---- 505
            +  A+    +  R+    +  +S + W+  I    SG  LH    E  ++  EM+    
Sbjct: 339 WEGVAEMRKTIR-RDNIQRIPGRSSIEWDEKIHEFVSGDRLHPRSKEIYRVLEEMMDRLK 397

Query: 506 HSGIRP 511
            +G +P
Sbjct: 398 QAGYKP 403


>gi|224065851|ref|XP_002301973.1| predicted protein [Populus trichocarpa]
 gi|222843699|gb|EEE81246.1| predicted protein [Populus trichocarpa]
          Length = 716

 Score =  422 bits (1086), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 236/663 (35%), Positives = 360/663 (54%), Gaps = 69/663 (10%)

Query: 190 FQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGL--KLGFHD---- 243
           F   I VF  M+  G    DS  +  V+   A +  L+ G ++ C  L   LG       
Sbjct: 55  FGHVIRVFSYMLTQG-IVPDSRVLPTVIKTCAALSALQTGKQMHCFALVSGLGLDSVVLS 113

Query: 244 ---HVYVL----------------------TGLVSFYSKCGEVERAELLF---RDI-VRP 274
              H+YV                       + L+S +++ G V+  + LF   RD+ V  
Sbjct: 114 SLLHMYVQFDHLKDARNVFDKLPQPGVVTSSALISRFARKGRVKETKELFYQTRDLGVEL 173

Query: 275 DLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIH 334
           +L+S N MISG+  +G    ++ +F+ +     + + +++  ++P         +   IH
Sbjct: 174 NLVSWNGMISGFNRSGSYLDAVLMFQNMHLEGLKPDGTSVSSVLPAVGDLDMPLMGIQIH 233

Query: 335 SFCLKSGIVSNSSVLTALSTVYSR----------LNEME--------------AARKLFD 370
            + +K G+  +  V++AL  +Y +           NEM+              +   L D
Sbjct: 234 CYVIKQGLGPDKFVVSALIDMYGKCACASEMSGVFNEMDEVDVGACNALVTGLSRNGLVD 293

Query: 371 ESSEK---------SLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSA 421
            + E          ++ SW +MIA  +QNG   EA+ LF+EMQ   V PN VT+  +L A
Sbjct: 294 NALEVFKQFKGMDLNVVSWTSMIASCSQNGKDMEALELFREMQIEGVKPNSVTIPCLLPA 353

Query: 422 CAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTW 481
           C  + A+  GK  H         +++YV +ALIDMYAKCG ++ +R  FD+M +++ V+W
Sbjct: 354 CGNIAALLHGKAAHCFSLRNGIFNDVYVGSALIDMYAKCGRMLASRLCFDMMPNRNLVSW 413

Query: 482 NTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIH 541
           N++++GY +HG   EA+ +F  M   G +P  V+F  VL AC+  GL  EG   F SM  
Sbjct: 414 NSLMAGYAMHGKTFEAINIFELMQRCGQKPDHVSFTCVLSACTQGGLTEEGWFYFDSMSR 473

Query: 542 DHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLAR 601
           +HG +   EHY+CMV +LGR+G+LE+A   IK +  EP   VWGALL +C +H   +L  
Sbjct: 474 NHGVEARMEHYSCMVTLLGRSGRLEEAYAMIKQMPFEPDSCVWGALLSSCRVHNRVDLGE 533

Query: 602 VASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTP 661
           +A++++FEL+P N G ++LLSNIY+++  +++   VR +++ R L K PG + IE+    
Sbjct: 534 IAAKRVFELEPRNPGNYILLSNIYASKAMWVEVDMVRDMMRSRGLKKNPGYSWIEIKNKV 593

Query: 662 HVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLA 721
           H+  +GD  HPQ   I   L KL  +M+++G+   T   L DVEE++KE ++  HSEKLA
Sbjct: 594 HMLLAGDSSHPQMPQIIEKLAKLTVEMKKSGYVPHTDFVLQDVEEQDKEQILCGHSEKLA 653

Query: 722 IAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCG 781
           +  GL+ T+PG  +++IKNLR+C DCH   KFIS    R I VRD NRFH FKGGVCSCG
Sbjct: 654 VVLGLLNTKPGFPLQVIKNLRICRDCHAVIKFISDFEKREIFVRDTNRFHQFKGGVCSCG 713

Query: 782 DYW 784
           DYW
Sbjct: 714 DYW 716



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 126/460 (27%), Positives = 210/460 (45%), Gaps = 73/460 (15%)

Query: 103 ALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSA 162
            + PD+     V+   +A      G  +H  A+VSG G D  V ++L+ +Y +F  +K A
Sbjct: 69  GIVPDSRVLPTVIKTCAALSALQTGKQMHCFALVSGLGLDSVVLSSLLHMYVQFDHLKDA 128

Query: 163 RKVFDKMP-----------------------------------EKDTVLWNSMISGLMKN 187
           R VFDK+P                                   E + V WN MISG  ++
Sbjct: 129 RNVFDKLPQPGVVTSSALISRFARKGRVKETKELFYQTRDLGVELNLVSWNGMISGFNRS 188

Query: 188 CCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYV 247
             + D++ +F +M    G   D TSV++VLPAV ++    +G++I C  +K G     +V
Sbjct: 189 GSYLDAVLMFQNMHLE-GLKPDGTSVSSVLPAVGDLDMPLMGIQIHCYVIKQGLGPDKFV 247

Query: 248 LTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGY--------------------- 286
           ++ L+  Y KC        +F ++   D+ +CNA+++G                      
Sbjct: 248 VSALIDMYGKCACASEMSGVFNEMDEVDVGACNALVTGLSRNGLVDNALEVFKQFKGMDL 307

Query: 287 ----------TC--NGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIH 334
                     +C  NGK   +L LFR++     + NS TI  L+P       L      H
Sbjct: 308 NVVSWTSMIASCSQNGKDMEALELFREMQIEGVKPNSVTIPCLLPACGNIAALLHGKAAH 367

Query: 335 SFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTE 394
            F L++GI ++  V +AL  +Y++   M A+R  FD    ++L SWN+++AGY  +G T 
Sbjct: 368 CFSLRNGIFNDVYVGSALIDMYAKCGRMLASRLCFDMMPNRNLVSWNSLMAGYAMHGKTF 427

Query: 395 EAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRN--FESNIYVSTA 452
           EAI++F+ MQ     P+ V+ + +LSAC Q G    G W +    SRN   E+ +   + 
Sbjct: 428 EAINIFELMQRCGQKPDHVSFTCVLSACTQGGLTEEG-WFYFDSMSRNHGVEARMEHYSC 486

Query: 453 LIDMYAKCGNIVEARELFDLMSHKSE-VTWNTMISGYGLH 491
           ++ +  + G + EA  +   M  + +   W  ++S   +H
Sbjct: 487 MVTLLGRSGRLEEAYAMIKQMPFEPDSCVWGALLSSCRVH 526



 Score =  109 bits (273), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 120/542 (22%), Positives = 210/542 (38%), Gaps = 134/542 (24%)

Query: 5   TPQSRNLFLSLLKGAKTQSQLT---QTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYAR 61
            P SR +  +++K     S L    Q H   ++ G   D   ++ L H    F     AR
Sbjct: 71  VPDSR-VLPTVIKTCAALSALQTGKQMHCFALVSGLGLDSVVLSSLLHMYVQFDHLKDAR 129

Query: 62  ALFFSIPKP-----------------------------------DLFLFNVIIRGFSNNE 86
            +F  +P+P                                   +L  +N +I GF+ + 
Sbjct: 130 NVFDKLPQPGVVTSSALISRFARKGRVKETKELFYQTRDLGVELNLVSWNGMISGFNRSG 189

Query: 87  MPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVG 146
               ++  + ++     L PD  + S VL A        +G+ +H + I  G G D FV 
Sbjct: 190 SYLDAVLMFQNMHLE-GLKPDGTSVSSVLPAVGDLDMPLMGIQIHCYVIKQGLGPDKFVV 248

Query: 147 AALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDM------ 200
           +AL+D+Y K +       VF++M E D    N++++GL +N    +++ VF         
Sbjct: 249 SALIDMYGKCACASEMSGVFNEMDEVDVGACNALVTGLSRNGLVDNALEVFKQFKGMDLN 308

Query: 201 -----------VRNG---------------GTWLDSTSVAAVLPAVAEVQELRLGMEIQC 234
                       +NG               G   +S ++  +LPA   +  L  G    C
Sbjct: 309 VVSWTSMIASCSQNGKDMEALELFREMQIEGVKPNSVTIPCLLPACGNIAALLHGKAAHC 368

Query: 235 LGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTES 294
             L+ G  + VYV + L+  Y+KCG +  + L F  +   +L+S N++++GY  +GKT  
Sbjct: 369 FSLRNGIFNDVYVGSALIDMYAKCGRMLASRLCFDMMPNRNLVSWNSLMAGYAMHGKTFE 428

Query: 295 SLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALST 354
           ++ +F  +    ++ +               H+  T C+ S C + G+            
Sbjct: 429 AINIFELMQRCGQKPD---------------HVSFT-CVLSACTQGGLT----------- 461

Query: 355 VYSRLNEMEAARKLFDESS-----EKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVA 409
                   E     FD  S     E  +  ++ M+    ++G  EEA ++ ++M      
Sbjct: 462 --------EEGWFYFDSMSRNHGVEARMEHYSCMVTLLGRSGRLEEAYAMIKQM---PFE 510

Query: 410 PNPVTVSSILSACAQLGAISLGKWVHELVKSRNFE------------SNIYVSTAL---I 454
           P+     ++LS+C     + LG    E+   R FE            SNIY S A+   +
Sbjct: 511 PDSCVWGALLSSCRVHNRVDLG----EIAAKRVFELEPRNPGNYILLSNIYASKAMWVEV 566

Query: 455 DM 456
           DM
Sbjct: 567 DM 568


>gi|449435364|ref|XP_004135465.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g40405-like [Cucumis sativus]
          Length = 614

 Score =  422 bits (1086), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 218/553 (39%), Positives = 321/553 (58%), Gaps = 50/553 (9%)

Query: 273 RPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNC 332
           +P L + N+MI  Y+ +     S + + ++L S + ++        P  Y F  L +  C
Sbjct: 71  KPTLFALNSMIRAYSKSLTPHKSFQFYNKILQSNDVMS--------PDNYTFNFL-VRTC 121

Query: 333 IHSFC--------------------LKSGIVSNSSVLTALSTVY---------------- 356
             S C                    ++SG++   + ++ LS+ +                
Sbjct: 122 AQSACEAGPAVHGALIKHGFEYDPHVESGLIFMYAEMSCLSSCHRVFESVQKPDLVCQTT 181

Query: 357 -----SRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPN 411
                ++  ++  AR LFD   ++   SWNAMIAGY Q G + EA++LF+ MQ   V  N
Sbjct: 182 MVSACAKCGDIGFARNLFDSMPQRDFVSWNAMIAGYAQRGQSREALNLFKLMQMDGVKVN 241

Query: 412 PVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFD 471
            V++ S+++AC  LGA+  GKW H  ++    +  + + TAL+DMY KCGN+  A ++F 
Sbjct: 242 EVSMISVVTACTHLGALDQGKWAHAYIEKNKIQMTVNLGTALVDMYFKCGNVDRALKVFW 301

Query: 472 LMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVRE 531
            M+ K+  TW+T I G  ++G+G + L+LFS M H GI P+ +TF+SVL  CS  G V E
Sbjct: 302 EMNEKNVYTWSTAIGGLAMNGYGQKCLELFSFMKHEGIAPNEITFISVLKGCSVVGFVDE 361

Query: 532 GDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGAC 591
           G   F SM  DHG +P  EHY CMVD+ GRAG+LE+AL FI  + ++P    WGALL AC
Sbjct: 362 GRSHFDSMKRDHGIEPRLEHYGCMVDLYGRAGRLEEALNFINTMPLKPHAGAWGALLNAC 421

Query: 592 MIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPG 651
            ++K+  L   AS KL E++ +N G +V LSNIY+   ++ + + VRQ +K   ++K PG
Sbjct: 422 RMYKNMELGEFASRKLIEVEGKNHGAYVSLSNIYADTGNWDRVSNVRQSMKAEGISKLPG 481

Query: 652 CTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKEL 711
           C+++EV G  H F SGD+ HP    I  M  +++ +++ AG+   T + L D+EEEEKE 
Sbjct: 482 CSVMEVNGEVHEFFSGDKSHPSYDVIETMWGEISKRLKLAGYVASTNSVLFDIEEEEKED 541

Query: 712 MMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFH 771
            +  HSEK+AIAFGL + + G  IRI+KNLR+C DCH  +K ISK+  R I+VRD NRFH
Sbjct: 542 ALCKHSEKMAIAFGLFSLKEGLPIRIVKNLRICWDCHDVSKMISKIFEREIIVRDRNRFH 601

Query: 772 HFKGGVCSCGDYW 784
           HFK G CSC D+W
Sbjct: 602 HFKDGECSCKDFW 614



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 118/492 (23%), Positives = 203/492 (41%), Gaps = 86/492 (17%)

Query: 13  LSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKAT--CYARALFFSIPKP 70
           ++L+    T  +L Q H Q++I+G  N+   + +    ++    T   Y+  +     KP
Sbjct: 13  IALIDSFITLKELKQIHTQLVINGLLNNRELLGQFVASIAVRNPTNLLYSNQILDQCAKP 72

Query: 71  DLFLFNVIIRGFSNNEMPKSSICFYTH-LRKNTALTPDNFTYSFVLS--AASACCDRSIG 127
            LF  N +IR +S +  P  S  FY   L+ N  ++PDN+T++F++   A SAC     G
Sbjct: 73  TLFALNSMIRAYSKSLTPHKSFQFYNKILQSNDVMSPDNYTFNFLVRTCAQSAC---EAG 129

Query: 128 VLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKS-------------------------- 161
             +HG  I  G+  D  V + L+ +Y + S + S                          
Sbjct: 130 PAVHGALIKHGFEYDPHVESGLIFMYAEMSCLSSCHRVFESVQKPDLVCQTTMVSACAKC 189

Query: 162 -----ARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAV 216
                AR +FD MP++D V WN+MI+G  +    ++++ +F  +++  G  ++  S+ +V
Sbjct: 190 GDIGFARNLFDSMPQRDFVSWNAMIAGYAQRGQSREALNLF-KLMQMDGVKVNEVSMISV 248

Query: 217 LPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDL 276
           + A   +  L  G        K      V + T LV  Y KCG V+RA  +F ++   ++
Sbjct: 249 VTACTHLGALDQGKWAHAYIEKNKIQMTVNLGTALVDMYFKCGNVDRALKVFWEMNEKNV 308

Query: 277 ISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSF 336
            + +  I G   NG  +  L LF                                   SF
Sbjct: 309 YTWSTAIGGLAMNGYGQKCLELF-----------------------------------SF 333

Query: 337 CLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESS-----EKSLASWNAMIAGYTQNG 391
               GI  N     ++    S +  ++  R  FD        E  L  +  M+  Y + G
Sbjct: 334 MKHEGIAPNEITFISVLKGCSVVGFVDEGRSHFDSMKRDHGIEPRLEHYGCMVDLYGRAG 393

Query: 392 LTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWV-HELVKSRNFESNIYVS 450
             EEA++    M    + P+     ++L+AC     + LG++   +L++        YVS
Sbjct: 394 RLEEALNFINTM---PLKPHAGAWGALLNACRMYKNMELGEFASRKLIEVEGKNHGAYVS 450

Query: 451 TALIDMYAKCGN 462
             L ++YA  GN
Sbjct: 451 --LSNIYADTGN 460


>gi|255561624|ref|XP_002521822.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223539035|gb|EEF40632.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 793

 Score =  422 bits (1086), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 250/733 (34%), Positives = 383/733 (52%), Gaps = 10/733 (1%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           A+ LF  + +  +  +N++I G+        +I  ++  R    L  D F+Y+ VLSA  
Sbjct: 63  AQKLFDRMSERSVISYNILISGYGGMGFYHKAIGLFSEARM-ACLKLDKFSYAGVLSACG 121

Query: 120 ACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNS 179
              D ++G ++HG AIV G G  +F+   L+D+Y K   +  AR +F+   E D V WNS
Sbjct: 122 QIKDFALGKVIHGLAIVCGLGQQVFLTNLLIDMYCKCERIDHARLLFESSDELDNVSWNS 181

Query: 180 MISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPA--VAEVQELRLGMEIQCLGL 237
           +I+G  +   +++ + +   M  + G  L++ ++ + L +  +     +  G  +    +
Sbjct: 182 LITGYARVGAYEEMLKLLVKM-HHTGLRLNAFTLGSALKSCYLNLNNMVSYGKTLHGYTV 240

Query: 238 KLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTES--- 294
           K G    + V T L+  Y+K G +  A  LFR     +++  NAMI+G+      +    
Sbjct: 241 KQGLDLDIVVGTALLDMYAKTGYLGDAIQLFRTSPNQNVVMYNAMIAGFIQTEDIDKECA 300

Query: 295 --SLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTAL 352
             +L+LF Q+     + +  T   +I +            IH+   K  I S+  + + L
Sbjct: 301 YEALKLFSQMQRQGIKPSDFTFSSIIKICNHIEAFEYGKQIHAHICKHNIQSDEFIGSTL 360

Query: 353 STVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNP 412
             +YS L   E   K F+ + +  + SW  MIAGY QNG  E A++LF E+ AS   P+ 
Sbjct: 361 IELYSLLGSTEDQLKCFNSTPKLDIVSWTTMIAGYAQNGQFESALALFYELLASGKKPDE 420

Query: 413 VTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDL 472
             ++++LSACA + A   G+ VH         +   V  + I MYAK GN+  A+  F+ 
Sbjct: 421 FIITTMLSACADVAAERSGEQVHGYAVKTGIGTLAIVQNSQISMYAKSGNLDSAKITFEE 480

Query: 473 MSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREG 532
           + +   V+W+ MI     HGH  +A+ LF  M   GI P+ +TFL VL ACSH GLV EG
Sbjct: 481 IKNPDVVSWSVMICSNAQHGHAKDAINLFELMKSYGIHPNQITFLGVLTACSHGGLVEEG 540

Query: 533 DEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACM 592
              ++SM  D+  K   +H  C+VD+L RAG+L  A  FI        P +W  LL  C 
Sbjct: 541 LRYYESMKKDYDMKINVKHCTCIVDLLSRAGRLLDAKNFILNSGFGDHPVMWRTLLSGCR 600

Query: 593 IHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGC 652
           I+KD    +  +EKL ELDP+    +VLL NIY+     L A  +R+++K R + K PG 
Sbjct: 601 IYKDIVTGKHVAEKLIELDPQESSSYVLLYNIYTDAGIDLPATKIRELMKDRGIRKEPGQ 660

Query: 653 TLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALH-DVEEEEKEL 711
           + IEVG   H F  GD  HP S  IY  LE +  K R+ G+  + +  +    +E +  L
Sbjct: 661 SWIEVGNEVHSFVVGDISHPMSQIIYKKLEGMLEKKRKIGYIDQKIQNVTISTKEVKGTL 720

Query: 712 MMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFH 771
            +  HSEKLA++FG+++  P   ++++KNLRVC DCH   K IS V  R I++RD+ RFH
Sbjct: 721 GVNHHSEKLAVSFGIVSLPPSAPVKVMKNLRVCHDCHATMKLISVVEKREIILRDSLRFH 780

Query: 772 HFKGGVCSCGDYW 784
           HFK G CSC DYW
Sbjct: 781 HFKEGSCSCNDYW 793



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 139/496 (28%), Positives = 241/496 (48%), Gaps = 24/496 (4%)

Query: 107 DNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVF 166
           D+  Y+ ++  +S       G L H H I + +   LF+    ++LY K+  + +A+K+F
Sbjct: 8   DSVAYTKLVQFSSKSGSSIHGKLAHAHMIKTAFNPCLFLLNNFLNLYSKWGEMGNAQKLF 67

Query: 167 DKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQEL 226
           D+M E+  + +N +ISG      +  +I +F +  R     LD  S A VL A  ++++ 
Sbjct: 68  DRMSERSVISYNILISGYGGMGFYHKAIGLFSE-ARMACLKLDKFSYAGVLSACGQIKDF 126

Query: 227 RLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGY 286
            LG  I  L +  G    V++   L+  Y KC  ++ A LLF      D +S N++I+GY
Sbjct: 127 ALGKVIHGLAIVCGLGQQVFLTNLLIDMYCKCERIDHARLLFESSDELDNVSWNSLITGY 186

Query: 287 TCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCI------HSFCLKS 340
              G  E  L+L  ++  +  R+N+ T+   +   Y    L+L N +      H + +K 
Sbjct: 187 ARVGAYEEMLKLLVKMHHTGLRLNAFTLGSALKSCY----LNLNNMVSYGKTLHGYTVKQ 242

Query: 341 GIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTE-----E 395
           G+  +  V TAL  +Y++   +  A +LF  S  +++  +NAMIAG+ Q    +     E
Sbjct: 243 GLDLDIVVGTALLDMYAKTGYLGDAIQLFRTSPNQNVVMYNAMIAGFIQTEDIDKECAYE 302

Query: 396 AISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALID 455
           A+ LF +MQ   + P+  T SSI+  C  + A   GK +H  +   N +S+ ++ + LI+
Sbjct: 303 ALKLFSQMQRQGIKPSDFTFSSIIKICNHIEAFEYGKQIHAHICKHNIQSDEFIGSTLIE 362

Query: 456 MYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVT 515
           +Y+  G+  +  + F+       V+W TMI+GY  +G    AL LF E+L SG +P    
Sbjct: 363 LYSLLGSTEDQLKCFNSTPKLDIVSWTTMIAGYAQNGQFESALALFYELLASGKKPDEFI 422

Query: 516 FLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKA---LEFI 572
             ++L AC+     R G+++    +   G   LA      + +  ++G L+ A    E I
Sbjct: 423 ITTMLSACADVAAERSGEQVHGYAVKT-GIGTLAIVQNSQISMYAKSGNLDSAKITFEEI 481

Query: 573 KGLAVEPGPAVWGALL 588
           K     P    W  ++
Sbjct: 482 K----NPDVVSWSVMI 493


>gi|225457769|ref|XP_002278218.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
            mitochondrial [Vitis vinifera]
 gi|302142763|emb|CBI19966.3| unnamed protein product [Vitis vinifera]
          Length = 1048

 Score =  422 bits (1086), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 237/679 (34%), Positives = 381/679 (56%), Gaps = 6/679 (0%)

Query: 28   THAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNEM 87
             HAQ I  G  +++   + L +  +  +    A+ +F ++ + +L L+N ++ G++ N  
Sbjct: 371  VHAQAIKQGLNSNVYVGSSLINMYAKCEKMEAAKKVFDALDERNLVLWNAMLGGYAQNGY 430

Query: 88   PKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGA 147
                +  ++ +R      PD FTY+ +LSA +      +G  LH   I   +  +LFV  
Sbjct: 431  ASKVMKLFSEMR-GCGFWPDEFTYTSILSACACLECLEMGRQLHSFIIKHNFEYNLFVEN 489

Query: 148  ALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTW 207
             LVD+Y K   ++ AR+ F+ +  +D V WN++I G ++     ++  +F  M+ +G   
Sbjct: 490  TLVDMYAKCGALEEARQQFEFIRNRDNVSWNAIIVGYVQEEDEDEAFNMFRRMILDG-IA 548

Query: 208  LDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELL 267
             D  S+A++L   A +Q L  G ++ C  +K G    +Y  + L+  Y KCG +E A  +
Sbjct: 549  PDEVSLASILSGCANLQALEQGEQVHCFLVKSGLQTCLYAGSSLIDMYVKCGAIEAARYV 608

Query: 268  FRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHL 327
            F  +    ++S NA+I+GY  N   E+ + LF+++       +  T   L+        L
Sbjct: 609  FSCMPSRSVVSMNAIIAGYAQNDLVEA-IDLFQEMQNEGLNPSEITFASLLDACTGPYKL 667

Query: 328  HLTNCIHSFCLKSGIVSNSSVL-TALSTVYSRLNEMEAARKLFDE-SSEKSLASWNAMIA 385
            +L   IH    K G++ +   L  +L  +Y        A  LF E    KS   W A+I+
Sbjct: 668  NLGRQIHCLIQKRGLLYDGDFLGVSLLVMYMNSQRKTDADILFSEFQYPKSTILWTAIIS 727

Query: 386  GYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFES 445
            G+TQNG +EEA+ L+QEM  +   P+  T +S+L AC+ L ++  G+ +H L+     +S
Sbjct: 728  GHTQNGCSEEALQLYQEMHRNNARPDQATFASVLRACSILASLGDGRMIHSLIFHVGLDS 787

Query: 446  NIYVSTALIDMYAKCGNIVEARELFDLMSHKSEV-TWNTMISGYGLHGHGLEALQLFSEM 504
            +    +A++DMYAKCG++  + ++F+ M  K++V +WN+MI G+  +G+   AL++F EM
Sbjct: 788  DELTGSAVVDMYAKCGDMKSSVQVFEEMGSKNDVISWNSMIVGFAKNGYAENALKIFDEM 847

Query: 505  LHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQ 564
             H+ IRP  VTFL VL ACSHAG V EG EIF  M+H +   P  +H ACM+D+LGR G 
Sbjct: 848  KHTRIRPDDVTFLGVLTACSHAGRVSEGREIFDIMVHSYKIVPRLDHCACMIDLLGRWGF 907

Query: 565  LEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNI 624
            L++A EFI  L  EP   +W  LLGAC IH D    R A+EKL EL+PEN   +VLLSNI
Sbjct: 908  LKEAEEFIDKLNFEPNAMIWATLLGACRIHGDDIRGRRAAEKLIELEPENSSPYVLLSNI 967

Query: 625  YSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKL 684
            Y+A  ++ +  +VR+ ++++ L K PGC+ I VG   ++F +GD+ HP +  I+A+L+ L
Sbjct: 968  YAASGNWDEVNSVRRAMREKGLRKLPGCSWIVVGQKTNLFVAGDKFHPSAGEIHALLKDL 1027

Query: 685  NGKMREAGFQTETVTALHD 703
               M+E G+  ET + L D
Sbjct: 1028 IALMKEDGYIAETDSLLED 1046



 Score =  249 bits (636), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 159/569 (27%), Positives = 281/569 (49%), Gaps = 55/569 (9%)

Query: 4   KTPQSRNLFLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATC----Y 59
           +TPQ       L + ++T   +   HAQ +  GF     +  +L   + D  A C    +
Sbjct: 88  ETPQR------LAQASRTSKTI---HAQTLKFGF----GSKGRLGSAIVDLYAKCGNVEF 134

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           A   F  + K D+  +N ++  +S     +  I  +  L +N  ++P+ FTY+ VLS+ +
Sbjct: 135 AAKAFNQLEKRDILAWNSVLSMYSRQGSLEQVIWCFGSL-QNCGVSPNQFTYAIVLSSCA 193

Query: 120 ACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNS 179
              D  +G  +H   I  G+  + F   +L+D+Y K   +  ARK+FD + + DTV W +
Sbjct: 194 RLVDIDLGKQVHCGVIKMGFEFNSFCEGSLIDMYSKCGSLVDARKIFDAVVDPDTVSWTA 253

Query: 180 MISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKL 239
           MI+G ++    ++++ VF DM +  G   D  +   V+ A              C+GL  
Sbjct: 254 MIAGYVQVGLPEEALKVFEDM-QKLGLVPDQVAFVTVITA--------------CVGL-- 296

Query: 240 GFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLF 299
                              G ++ A  LF  +   ++++ N MISG+   G    ++  F
Sbjct: 297 -------------------GRLDDACDLFVQMPNTNVVAWNVMISGHVKRGCDIEAIDFF 337

Query: 300 RQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRL 359
           + +  +  +   ST+  ++        L+    +H+  +K G+ SN  V ++L  +Y++ 
Sbjct: 338 KNMWKTGVKSTRSTLGSVLSAIASLEALNYGLLVHAQAIKQGLNSNVYVGSSLINMYAKC 397

Query: 360 NEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSIL 419
            +MEAA+K+FD   E++L  WNAM+ GY QNG   + + LF EM+     P+  T +SIL
Sbjct: 398 EKMEAAKKVFDALDERNLVLWNAMLGGYAQNGYASKVMKLFSEMRGCGFWPDEFTYTSIL 457

Query: 420 SACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEV 479
           SACA L  + +G+ +H  +   NFE N++V   L+DMYAKCG + EAR+ F+ + ++  V
Sbjct: 458 SACACLECLEMGRQLHSFIIKHNFEYNLFVENTLVDMYAKCGALEEARQQFEFIRNRDNV 517

Query: 480 TWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSM 539
           +WN +I GY       EA  +F  M+  GI P  V+  S+L  C++   + +G+++   +
Sbjct: 518 SWNAIIVGYVQEEDEDEAFNMFRRMILDGIAPDEVSLASILSGCANLQALEQGEQVHCFL 577

Query: 540 IHDHGFKPLAEHYACMVDILGRAGQLEKA 568
           +   G +      + ++D+  + G +E A
Sbjct: 578 VKS-GLQTCLYAGSSLIDMYVKCGAIEAA 605



 Score =  245 bits (626), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 156/528 (29%), Positives = 274/528 (51%), Gaps = 6/528 (1%)

Query: 63  LFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACC 122
           LF  +P  ++  +NV+I G         +I F+ ++ K T +     T   VLSA ++  
Sbjct: 305 LFVQMPNTNVVAWNVMISGHVKRGCDIEAIDFFKNMWK-TGVKSTRSTLGSVLSAIASLE 363

Query: 123 DRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMIS 182
             + G+L+H  AI  G  S+++VG++L+++Y K   +++A+KVFD + E++ VLWN+M+ 
Sbjct: 364 ALNYGLLVHAQAIKQGLNSNVYVGSSLINMYAKCEKMEAAKKVFDALDERNLVLWNAMLG 423

Query: 183 GLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFH 242
           G  +N      + +F +M R  G W D  +  ++L A A ++ L +G ++    +K  F 
Sbjct: 424 GYAQNGYASKVMKLFSEM-RGCGFWPDEFTYTSILSACACLECLEMGRQLHSFIIKHNFE 482

Query: 243 DHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQL 302
            +++V   LV  Y+KCG +E A   F  I   D +S NA+I GY      + +  +FR++
Sbjct: 483 YNLFVENTLVDMYAKCGALEEARQQFEFIRNRDNVSWNAIIVGYVQEEDEDEAFNMFRRM 542

Query: 303 LASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEM 362
           +      +  ++  ++        L     +H F +KSG+ +     ++L  +Y +   +
Sbjct: 543 ILDGIAPDEVSLASILSGCANLQALEQGEQVHCFLVKSGLQTCLYAGSSLIDMYVKCGAI 602

Query: 363 EAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSAC 422
           EAAR +F     +S+ S NA+IAGY QN L  EAI LFQEMQ   + P+ +T +S+L AC
Sbjct: 603 EAARYVFSCMPSRSVVSMNAIIAGYAQNDLV-EAIDLFQEMQNEGLNPSEITFASLLDAC 661

Query: 423 AQLGAISLGKWVHELVKSRN-FESNIYVSTALIDMYAKCGNIVEARELFDLMSH-KSEVT 480
                ++LG+ +H L++ R       ++  +L+ MY       +A  LF    + KS + 
Sbjct: 662 TGPYKLNLGRQIHCLIQKRGLLYDGDFLGVSLLVMYMNSQRKTDADILFSEFQYPKSTIL 721

Query: 481 WNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMI 540
           W  +ISG+  +G   EALQL+ EM  +  RP   TF SVL ACS    + +G  +  S+I
Sbjct: 722 WTAIISGHTQNGCSEEALQLYQEMHRNNARPDQATFASVLRACSILASLGDG-RMIHSLI 780

Query: 541 HDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALL 588
              G        + +VD+  + G ++ +++  + +  +     W +++
Sbjct: 781 FHVGLDSDELTGSAVVDMYAKCGDMKSSVQVFEEMGSKNDVISWNSMI 828



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 148/570 (25%), Positives = 274/570 (48%), Gaps = 24/570 (4%)

Query: 27   QTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNE 86
            Q H+ II H F+ +L     L    +   A   AR  F  I   D   +N II G+   E
Sbjct: 471  QLHSFIIKHNFEYNLFVENTLVDMYAKCGALEEARQQFEFIRNRDNVSWNAIIVGYVQEE 530

Query: 87   MPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVG 146
                +   +  +  +  + PD  + + +LS  +       G  +H   + SG  + L+ G
Sbjct: 531  DEDEAFNMFRRMILD-GIAPDEVSLASILSGCANLQALEQGEQVHCFLVKSGLQTCLYAG 589

Query: 147  AALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGT 206
            ++L+D+Y K   +++AR VF  MP +  V  N++I+G  +N    ++I +F +M +N G 
Sbjct: 590  SSLIDMYVKCGAIEAARYVFSCMPSRSVVSMNAIIAGYAQN-DLVEAIDLFQEM-QNEGL 647

Query: 207  WLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLG-FHDHVYVLTGLVSFYSKCGEVERAE 265
                 + A++L A     +L LG +I CL  K G  +D  ++   L+  Y        A+
Sbjct: 648  NPSEITFASLLDACTGPYKLNLGRQIHCLIQKRGLLYDGDFLGVSLLVMYMNSQRKTDAD 707

Query: 266  LLFRDIVRP-DLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPF 324
            +LF +   P   I   A+ISG+T NG +E +L+L++++  +  R + +T   ++      
Sbjct: 708  ILFSEFQYPKSTILWTAIISGHTQNGCSEEALQLYQEMHRNNARPDQATFASVLRACSIL 767

Query: 325  GHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDE-SSEKSLASWNAM 383
              L     IHS     G+ S+    +A+  +Y++  +M+++ ++F+E  S+  + SWN+M
Sbjct: 768  ASLGDGRMIHSLIFHVGLDSDELTGSAVVDMYAKCGDMKSSVQVFEEMGSKNDVISWNSM 827

Query: 384  IAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHE-LVKSRN 442
            I G+ +NG  E A+ +F EM+ +++ P+ VT   +L+AC+  G +S G+ + + +V S  
Sbjct: 828  IVGFAKNGYAENALKIFDEMKHTRIRPDDVTFLGVLTACSHAGRVSEGREIFDIMVHSYK 887

Query: 443  FESNIYVSTALIDMYAKCGNIVEARELFDLMSHK-SEVTWNTMISGYGLHGHGLEALQLF 501
                +     +ID+  + G + EA E  D ++ + + + W T++    +HG  +   +  
Sbjct: 888  IVPRLDHCACMIDLLGRWGFLKEAEEFIDKLNFEPNAMIWATLLGACRIHGDDIRGRRAA 947

Query: 502  SEMLHSGIRP---SGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDI 558
             +++   + P   S    LS +YA S  G   E + + ++M  + G + L     C   +
Sbjct: 948  EKLIE--LEPENSSPYVLLSNIYAAS--GNWDEVNSVRRAM-REKGLRKLP---GCSWIV 999

Query: 559  LGRAGQLEKALEFIKGLAVEPGPAVWGALL 588
            +G+   L     F+ G    P      ALL
Sbjct: 1000 VGQKTNL-----FVAGDKFHPSAGEIHALL 1024



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 110/458 (24%), Positives = 198/458 (43%), Gaps = 44/458 (9%)

Query: 24  QLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFS 83
           Q  Q H  ++  G Q  L   + L        A   AR +F  +P   +   N II G++
Sbjct: 569 QGEQVHCFLVKSGLQTCLYAGSSLIDMYVKCGAIEAARYVFSCMPSRSVVSMNAIIAGYA 628

Query: 84  NNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSG--YGS 141
            N++ ++   F     +N  L P   T++ +L A +     ++G  +H      G  Y  
Sbjct: 629 QNDLVEAIDLFQE--MQNEGLNPSEITFASLLDACTGPYKLNLGRQIHCLIQKRGLLYDG 686

Query: 142 DLFVGAALVDLYFKFSWVKSARKVFDKMP-EKDTVLWNSMISGLMKNCCFQDSIWVFGDM 200
           D F+G +L+ +Y        A  +F +    K T+LW ++ISG  +N C ++++ ++ +M
Sbjct: 687 D-FLGVSLLVMYMNSQRKTDADILFSEFQYPKSTILWTAIISGHTQNGCSEEALQLYQEM 745

Query: 201 VRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGE 260
            RN     D  + A+VL A + +  L  G  I  L   +G        + +V  Y+KCG+
Sbjct: 746 HRNNAR-PDQATFASVLRACSILASLGDGRMIHSLIFHVGLDSDELTGSAVVDMYAKCGD 804

Query: 261 VERAELLFRDI-VRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIP 319
           ++ +  +F ++  + D+IS N+MI G+  NG  E++L++F ++  +  R +  T +G+  
Sbjct: 805 MKSSVQVFEEMGSKNDVISWNSMIVGFAKNGYAENALKIFDEMKHTRIRPDDVTFLGV-- 862

Query: 320 VFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLAS 379
                    LT C H+  +  G      +   +   Y  +  ++    + D      L  
Sbjct: 863 ---------LTACSHAGRVSEG----REIFDIMVHSYKIVPRLDHCACMID-----LLGR 904

Query: 380 WNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHE-LV 438
           W          G  +EA     ++      PN +  +++L AC   G    G+   E L+
Sbjct: 905 W----------GFLKEAEEFIDKL---NFEPNAMIWATLLGACRIHGDDIRGRRAAEKLI 951

Query: 439 KSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHK 476
           +     S+ YV   L ++YA  GN  E   +   M  K
Sbjct: 952 ELEPENSSPYV--LLSNIYAASGNWDEVNSVRRAMREK 987



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 38/159 (23%), Positives = 77/159 (48%), Gaps = 2/159 (1%)

Query: 432 KWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLH 491
           K +H       F S   + +A++D+YAKCGN+  A + F+ +  +  + WN+++S Y   
Sbjct: 101 KTIHAQTLKFGFGSKGRLGSAIVDLYAKCGNVEFAAKAFNQLEKRDILAWNSVLSMYSRQ 160

Query: 492 GHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEH 551
           G   + +  F  + + G+ P+  T+  VL +C+    +  G ++   +I   GF+  +  
Sbjct: 161 GSLEQVIWCFGSLQNCGVSPNQFTYAIVLSSCARLVDIDLGKQVHCGVIK-MGFEFNSFC 219

Query: 552 YACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGA 590
              ++D+  + G L  A +    + V+P    W A++  
Sbjct: 220 EGSLIDMYSKCGSLVDARKIFDAV-VDPDTVSWTAMIAG 257


>gi|225452893|ref|XP_002278719.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15340,
           mitochondrial-like [Vitis vinifera]
          Length = 632

 Score =  422 bits (1086), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 254/700 (36%), Positives = 382/700 (54%), Gaps = 87/700 (12%)

Query: 100 KNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGS--DLFVGAALVDLYFKFS 157
           ++TAL+  +  Y F+L + +      IG  LH   I +G     + F+  AL+  Y    
Sbjct: 5   RHTALSSVSRHYRFLLRSCARESSLDIGERLHATIITTGIAGAPETFLHNALLQFYASCG 64

Query: 158 WVKSARKVFDKMPE--KDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAA 215
               ARKVFD++P   KDTV W +++   +++    +++ +F +M R  G   D  ++  
Sbjct: 65  CAWQARKVFDEIPHSHKDTVDWTTLMGCFVRHNVSDEALLIFVEM-RRCGVKPDEVTLVC 123

Query: 216 VLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPD 275
           +    A + ++ +G +     +K+G                  G VE+A           
Sbjct: 124 LFGGCARLGDVVVGAQGHGCMVKMGL-----------------GGVEKA----------- 155

Query: 276 LISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHS 335
              CNA++  Y  +G    + R+F ++    + V S T++             L   I S
Sbjct: 156 ---CNAVMDMYAKSGLMGEARRVFYEM--KGQSVVSWTVI-------------LDGVIRS 197

Query: 336 FCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEE 395
             +++G                        R +FDE  E++  +W  MIAGY  +GLT+E
Sbjct: 198 EGVRNG------------------------RVVFDEMPERNEVAWTIMIAGYLDSGLTQE 233

Query: 396 AISLFQEMQAS-KVAPNPVTVSSILSACAQLGAISLGKWVHEL-VKSRNFESNIYVSTAL 453
           + +L +EM    ++  N VT+ SIL+AC+Q G + +G+WVH   +K++  E NI V TA+
Sbjct: 234 SFALVREMIFDLEMELNYVTLCSILTACSQSGDLMMGRWVHAYALKTKEKELNIMVGTAM 293

Query: 454 IDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSG 513
           +DMYAKCG I  A + F  M  ++ V+WN M+SG  +HG G  AL +F +M     +P  
Sbjct: 294 VDMYAKCGRIHIAFKFFKKMPQRNVVSWNAMLSGLAMHGLGRAALDIFPQMFKEA-KPDD 352

Query: 514 VTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIK 573
           VTF SVL ACSH+GLV +G   F ++   +G  P  EHYACMVD+LGRAG+LE+A   ++
Sbjct: 353 VTFTSVLSACSHSGLVDQGCFYFGNLESVYGITPKVEHYACMVDLLGRAGRLEEAEILVR 412

Query: 574 GLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQ 633
            + + P   V G+LLG+C IH    L     ++L +LDP+N  YH+LLSN+Y+      +
Sbjct: 413 EMPIRPNEVVLGSLLGSCSIHGKLQLGEHLLQELVQLDPQNTEYHILLSNMYALAGKQNR 472

Query: 634 AATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGF 693
           A ++RQV+KKR + K PG + I VGG  H F++GD+ HP++  +Y ML+++  ++R AG+
Sbjct: 473 ANSLRQVLKKRGIKKVPGMSSIHVGGQVHQFSAGDKSHPRTREVYNMLDEMIPRLRLAGY 532

Query: 694 QTETV-------TALHD--VEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVC 744
              T         +L D  VE+EEKE  +  HSEKLAI FGLI+T PG  + I KNLR+C
Sbjct: 533 APNTALQTFAGCDSLEDDLVEQEEKEQALFSHSEKLAICFGLISTGPGVPLHIFKNLRIC 592

Query: 745 LDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
            DCH+A K +SK+  R IV+RD NRFH FK G CSC DYW
Sbjct: 593 QDCHSAIKIVSKIYNREIVIRDRNRFHCFKEGSCSCCDYW 632



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 121/507 (23%), Positives = 215/507 (42%), Gaps = 87/507 (17%)

Query: 15  LLKGAKTQSQLT---QTHAQIIIHGFQNDLSTVTKLAHRLSDFKATC----YARALFFSI 67
           LL+    +S L    + HA II  G     +  T L + L  F A+C     AR +F  I
Sbjct: 19  LLRSCARESSLDIGERLHATIITTGIAG--APETFLHNALLQFYASCGCAWQARKVFDEI 76

Query: 68  PK--PDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRS 125
           P    D   +  ++  F  + +   ++  +  +R+   + PD  T   +    +   D  
Sbjct: 77  PHSHKDTVDWTTLMGCFVRHNVSDEALLIFVEMRR-CGVKPDEVTLVCLFGGCARLGDVV 135

Query: 126 IGVLLHGHAIVSGYGSDLFVGAALVDLYFK-------------------FSW-------- 158
           +G   HG  +  G G       A++D+Y K                    SW        
Sbjct: 136 VGAQGHGCMVKMGLGGVEKACNAVMDMYAKSGLMGEARRVFYEMKGQSVVSWTVILDGVI 195

Query: 159 ----VKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVA 214
               V++ R VFD+MPE++ V W  MI+G + +   Q+S  +  +M+ +    L+  ++ 
Sbjct: 196 RSEGVRNGRVVFDEMPERNEVAWTIMIAGYLDSGLTQESFALVREMIFDLEMELNYVTLC 255

Query: 215 AVLPAVAEVQELRLGMEIQCLGLKLGFHD-HVYVLTGLVSFYSKCGEVERAELLFRDIVR 273
           ++L A ++  +L +G  +    LK    + ++ V T +V  Y+KCG +  A   F+ + +
Sbjct: 256 SILTACSQSGDLMMGRWVHAYALKTKEKELNIMVGTAMVDMYAKCGRIHIAFKFFKKMPQ 315

Query: 274 PDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCI 333
            +++S NAM+SG   +G   ++L +F Q+   A + +  T   ++               
Sbjct: 316 RNVVSWNAMLSGLAMHGLGRAALDIFPQMFKEA-KPDDVTFTSVL--------------- 359

Query: 334 HSFCLKSGIVSNSSV-LTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGL 392
            S C  SG+V         L +VY    ++E                +  M+    + G 
Sbjct: 360 -SACSHSGLVDQGCFYFGNLESVYGITPKVE---------------HYACMVDLLGRAGR 403

Query: 393 TEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGK-WVHELVK--SRNFESNIYV 449
            EEA  L +EM    + PN V + S+L +C+  G + LG+  + ELV+   +N E +I +
Sbjct: 404 LEEAEILVREM---PIRPNEVVLGSLLGSCSIHGKLQLGEHLLQELVQLDPQNTEYHILL 460

Query: 450 STALIDMYAKCGNIVEARELFDLMSHK 476
           S    +MYA  G    A  L  ++  +
Sbjct: 461 S----NMYALAGKQNRANSLRQVLKKR 483


>gi|240255401|ref|NP_189042.4| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332643322|gb|AEE76843.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 665

 Score =  422 bits (1086), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 212/534 (39%), Positives = 324/534 (60%), Gaps = 1/534 (0%)

Query: 241 FHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFR 300
           F   + +   L++ Y+KCG +E A  +F  + + D ++   +ISGY+ + +   +L  F 
Sbjct: 91  FRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFN 150

Query: 301 QLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLN 360
           Q+L      N  T+  +I            + +H FC+K G  SN  V +AL  +Y+R  
Sbjct: 151 QMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYG 210

Query: 361 EMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILS 420
            M+ A+ +FD    ++  SWNA+IAG+ +   TE+A+ LFQ M      P+  + +S+  
Sbjct: 211 LMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFG 270

Query: 421 ACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVT 480
           AC+  G +  GKWVH  +     +   +    L+DMYAK G+I +AR++FD ++ +  V+
Sbjct: 271 ACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVS 330

Query: 481 WNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMI 540
           WN++++ Y  HG G EA+  F EM   GIRP+ ++FLSVL ACSH+GL+ EG   ++ M 
Sbjct: 331 WNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMK 390

Query: 541 HDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLA 600
            D G  P A HY  +VD+LGRAG L +AL FI+ + +EP  A+W ALL AC +HK+T L 
Sbjct: 391 KD-GIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELG 449

Query: 601 RVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGT 660
             A+E +FELDP++ G HV+L NIY++   +  AA VR+ +K+  + K P C+ +E+   
Sbjct: 450 AYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVEIENA 509

Query: 661 PHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKL 720
            H+F + D+ HPQ   I    E++  K++E G+  +T   +  V+++E+E+ ++ HSEK+
Sbjct: 510 IHMFVANDERHPQREEIARKWEEVLAKIKELGYVPDTSHVIVHVDQQEREVNLQYHSEKI 569

Query: 721 AIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFK 774
           A+AF L+ T PG+ I I KN+RVC DCHTA K  SKV GR I+VRD NRFHHFK
Sbjct: 570 ALAFALLNTPPGSTIHIKKNIRVCGDCHTAIKLASKVVGREIIVRDTNRFHHFK 623



 Score =  172 bits (436), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 97/366 (26%), Positives = 194/366 (53%), Gaps = 2/366 (0%)

Query: 127 GVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMK 186
           G ++H H + S +  D+ +G  L+++Y K   ++ ARKVF+KMP++D V W ++ISG  +
Sbjct: 79  GRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQ 138

Query: 187 NCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVY 246
           +    D++  F  M+R G +  +  ++++V+ A A  +    G ++    +K GF  +V+
Sbjct: 139 HDRPCDALLFFNQMLRFGYS-PNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVH 197

Query: 247 VLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASA 306
           V + L+  Y++ G ++ A+L+F  +   + +S NA+I+G+     TE +L LF+ +L   
Sbjct: 198 VGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDG 257

Query: 307 ERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAAR 366
            R +  +   L       G L     +H++ +KSG    +     L  +Y++   +  AR
Sbjct: 258 FRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDAR 317

Query: 367 KLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLG 426
           K+FD  +++ + SWN+++  Y Q+G  +EA+  F+EM+   + PN ++  S+L+AC+  G
Sbjct: 318 KIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSG 377

Query: 427 AISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMS-HKSEVTWNTMI 485
            +  G   +EL+K        +    ++D+  + G++  A    + M    +   W  ++
Sbjct: 378 LLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALL 437

Query: 486 SGYGLH 491
           +   +H
Sbjct: 438 NACRMH 443



 Score =  132 bits (331), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 75/262 (28%), Positives = 139/262 (53%), Gaps = 2/262 (0%)

Query: 333 IHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGL 392
           +H+  L+S    +  +   L  +Y++   +E ARK+F++  ++   +W  +I+GY+Q+  
Sbjct: 82  VHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDR 141

Query: 393 TEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTA 452
             +A+  F +M     +PN  T+SS++ A A       G  +H       F+SN++V +A
Sbjct: 142 PCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSA 201

Query: 453 LIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPS 512
           L+D+Y + G + +A+ +FD +  +++V+WN +I+G+       +AL+LF  ML  G RPS
Sbjct: 202 LLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPS 261

Query: 513 GVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFI 572
             ++ S+  ACS  G + +G  +   MI   G K +A     ++D+  ++G +  A +  
Sbjct: 262 HFSYASLFGACSSTGFLEQGKWVHAYMIKS-GEKLVAFAGNTLLDMYAKSGSIHDARKIF 320

Query: 573 KGLAVEPGPAVWGALLGACMIH 594
             LA +     W +LL A   H
Sbjct: 321 DRLA-KRDVVSWNSLLTAYAQH 341



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 95/397 (23%), Positives = 184/397 (46%), Gaps = 14/397 (3%)

Query: 6   PQSRNLFLSLLKGAKTQSQLTQ---THAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARA 62
           P  R  + +LLK       L Q    HA I+   F++D+     L +  +   +   AR 
Sbjct: 57  PADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARK 116

Query: 63  LFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASA-- 120
           +F  +P+ D   +  +I G+S ++ P  ++ F+  + +    +P+ FT S V+ AA+A  
Sbjct: 117 VFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLR-FGYSPNEFTLSSVIKAAAAER 175

Query: 121 --CCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWN 178
             CC    G  LHG  +  G+ S++ VG+AL+DLY ++  +  A+ VFD +  ++ V WN
Sbjct: 176 RGCC----GHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWN 231

Query: 179 SMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLK 238
           ++I+G  +    + ++ +F  M+R+G       S A++  A +    L  G  +    +K
Sbjct: 232 ALIAGHARRSGTEKALELFQGMLRDGFR-PSHFSYASLFGACSSTGFLEQGKWVHAYMIK 290

Query: 239 LGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRL 298
            G     +    L+  Y+K G +  A  +F  + + D++S N++++ Y  +G  + ++  
Sbjct: 291 SGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWW 350

Query: 299 FRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSR 358
           F ++     R N  + + ++      G L      +    K GIV  +     +  +  R
Sbjct: 351 FEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGR 410

Query: 359 LNEMEAARKLFDESS-EKSLASWNAMIAGYTQNGLTE 394
             ++  A +  +E   E + A W A++     +  TE
Sbjct: 411 AGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTE 447



 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 64/227 (28%), Positives = 99/227 (43%), Gaps = 39/227 (17%)

Query: 401 QEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKC 460
            +++ S +  +    +++L  C     +  G+ VH  +    F  +I +   L++MYAKC
Sbjct: 49  NDLEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKC 108

Query: 461 GNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVL 520
           G++ EAR++F+ M  +  VTW T+ISGY  H    +AL  F++ML  G  P+  T  SV+
Sbjct: 109 GSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVI 168

Query: 521 YACS-----------HAGLVREGDEIFQSMIH-DHGFKPLAEHYACMVD----------- 557
            A +           H   V+ G   F S +H       L   Y  M D           
Sbjct: 169 KAAAAERRGCCGHQLHGFCVKCG---FDSNVHVGSALLDLYTRYGLMDDAQLVFDALESR 225

Query: 558 --------ILGRAGQ--LEKALEFIKGL---AVEPGPAVWGALLGAC 591
                   I G A +   EKALE  +G+      P    + +L GAC
Sbjct: 226 NDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGAC 272


>gi|224061246|ref|XP_002300388.1| predicted protein [Populus trichocarpa]
 gi|222847646|gb|EEE85193.1| predicted protein [Populus trichocarpa]
          Length = 514

 Score =  422 bits (1085), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 221/511 (43%), Positives = 309/511 (60%), Gaps = 19/511 (3%)

Query: 286 YTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSN 345
           +TC+   ++ L+L       ++ VN  TI GL        +L L N I +     G + +
Sbjct: 11  FTCSFVLKACLKL-------SDVVNGKTIHGLFQKLGFGSNLFLQNMILNLYGLCGEMGD 63

Query: 346 SSVL---------TALSTVYSRL---NEMEAARKLFDESSEKSLASWNAMIAGYTQNGLT 393
           + +L            + V ++L    +++ A   F     K++ SW +MI+G+ Q G  
Sbjct: 64  AMLLFEKMPQRDAVTWNIVIAQLAKRGDIDGAYGFFLRMPNKNVRSWTSMISGFVQCGKP 123

Query: 394 EEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTAL 453
            EAI LF +++   V PN VTV S+L+ACA LG + LG+ VHE      F+ N++V   L
Sbjct: 124 NEAIDLFMKLEDEAVRPNEVTVVSVLAACADLGDLDLGRIVHEYSTKSGFKRNVHVCNTL 183

Query: 454 IDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSG 513
           IDMY KCG +  AR +F  M  ++ V+W+ MI+G  +HG   EAL LFSEM+  G++P+G
Sbjct: 184 IDMYVKCGCLENARRVFYEMEERTVVSWSAMIAGLAMHGQAEEALCLFSEMIKLGVKPNG 243

Query: 514 VTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIK 573
           VTF+ +L+ACSH GL+ EG   F SM  D+G  P  EHY C+VD+  RAG LE+A EFI 
Sbjct: 244 VTFIGLLHACSHMGLIDEGRRFFASMTADYGVIPQIEHYGCVVDLFSRAGLLEEAHEFIL 303

Query: 574 GLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQ 633
            + ++P   VWGALLG C +HK+ +LA  A + L ELDP N GY+V++SNIY+    +  
Sbjct: 304 SMPIKPNGVVWGALLGGCKVHKNIDLAEEAIKHLSELDPLNDGYYVVISNIYAEAERWED 363

Query: 634 AATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGF 693
           AA VR+++K R + K  G + I V G  H F +GDQ HPQ+  I  + +KL  KM+  G+
Sbjct: 364 AARVRKLMKDRGVKKTSGWSSITVNGVVHEFVAGDQTHPQAEDICKIWDKLLVKMKRRGY 423

Query: 694 QTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKF 753
             +T   L D+EE+EKE  +  HSEKLA+ FGL+ T  GT IRI+KNLRVC DCH A K 
Sbjct: 424 APKTSVVLLDMEEKEKEKFLYRHSEKLAVVFGLMTTPEGTPIRIMKNLRVCEDCHAALKI 483

Query: 754 ISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           IS +  R I+VRD NRFH F+ G CSC D+W
Sbjct: 484 ISGIVSREIIVRDRNRFHCFRDGQCSCRDFW 514



 Score =  132 bits (333), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 94/332 (28%), Positives = 154/332 (46%), Gaps = 36/332 (10%)

Query: 209 DSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLF 268
           D+ + + VL A  ++ ++  G  I  L  KLGF  ++++   +++ Y  CGE+  A LLF
Sbjct: 9   DTFTCSFVLKACLKLSDVVNGKTIHGLFQKLGFGSNLFLQNMILNLYGLCGEMGDAMLLF 68

Query: 269 RDIVRPDLISCN-------------------------------AMISGYTCNGKTESSLR 297
             + + D ++ N                               +MISG+   GK   ++ 
Sbjct: 69  EKMPQRDAVTWNIVIAQLAKRGDIDGAYGFFLRMPNKNVRSWTSMISGFVQCGKPNEAID 128

Query: 298 LFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYS 357
           LF +L   A R N  T+V ++      G L L   +H +  KSG   N  V   L  +Y 
Sbjct: 129 LFMKLEDEAVRPNEVTVVSVLAACADLGDLDLGRIVHEYSTKSGFKRNVHVCNTLIDMYV 188

Query: 358 RLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSS 417
           +   +E AR++F E  E+++ SW+AMIAG   +G  EEA+ LF EM    V PN VT   
Sbjct: 189 KCGCLENARRVFYEMEERTVVSWSAMIAGLAMHGQAEEALCLFSEMIKLGVKPNGVTFIG 248

Query: 418 ILSACAQLGAISLG-KWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHK 476
           +L AC+ +G I  G ++   +         I     ++D++++ G + EA E    M  K
Sbjct: 249 LLHACSHMGLIDEGRRFFASMTADYGVIPQIEHYGCVVDLFSRAGLLEEAHEFILSMPIK 308

Query: 477 SE-VTWNTMISGYGLHGH---GLEALQLFSEM 504
              V W  ++ G  +H +     EA++  SE+
Sbjct: 309 PNGVVWGALLGGCKVHKNIDLAEEAIKHLSEL 340



 Score =  105 bits (263), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 88/337 (26%), Positives = 149/337 (44%), Gaps = 41/337 (12%)

Query: 106 PDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKV 165
           PD FT SFVL A     D   G  +HG     G+GS+LF+   +++LY     +  A  +
Sbjct: 8   PDTFTCSFVLKACLKLSDVVNGKTIHGLFQKLGFGSNLFLQNMILNLYGLCGEMGDAMLL 67

Query: 166 FDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMV-RNGGTWL---------------- 208
           F+KMP++D V WN +I+ L K      +   F  M  +N  +W                 
Sbjct: 68  FEKMPQRDAVTWNIVIAQLAKRGDIDGAYGFFLRMPNKNVRSWTSMISGFVQCGKPNEAI 127

Query: 209 -------------DSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFY 255
                        +  +V +VL A A++ +L LG  +     K GF  +V+V   L+  Y
Sbjct: 128 DLFMKLEDEAVRPNEVTVVSVLAACADLGDLDLGRIVHEYSTKSGFKRNVHVCNTLIDMY 187

Query: 256 SKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIV 315
            KCG +E A  +F ++    ++S +AMI+G   +G+ E +L LF +++    + N  T +
Sbjct: 188 VKCGCLENARRVFYEMEERTVVSWSAMIAGLAMHGQAEEALCLFSEMIKLGVKPNGVTFI 247

Query: 316 GLIPVFYPFGHLHLTN----CIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARK-LFD 370
           GL+   +   H+ L +       S     G++        +  ++SR   +E A + +  
Sbjct: 248 GLL---HACSHMGLIDEGRRFFASMTADYGVIPQIEHYGCVVDLFSRAGLLEEAHEFILS 304

Query: 371 ESSEKSLASWNAMIAG---YTQNGLTEEAISLFQEMQ 404
              + +   W A++ G   +    L EEAI    E+ 
Sbjct: 305 MPIKPNGVVWGALLGGCKVHKNIDLAEEAIKHLSELD 341



 Score = 83.2 bits (204), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 60/223 (26%), Positives = 96/223 (43%), Gaps = 33/223 (14%)

Query: 403 MQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGN 462
           M+   V P+  T S +L AC +L  +  GK +H L +   F SN+++   ++++Y  CG 
Sbjct: 1   MRLFDVLPDTFTCSFVLKACLKLSDVVNGKTIHGLFQKLGFGSNLFLQNMILNLYGLCGE 60

Query: 463 IVEARELFDLMSHKSEVTWN-------------------------------TMISGYGLH 491
           + +A  LF+ M  +  VTWN                               +MISG+   
Sbjct: 61  MGDAMLLFEKMPQRDAVTWNIVIAQLAKRGDIDGAYGFFLRMPNKNVRSWTSMISGFVQC 120

Query: 492 GHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEH 551
           G   EA+ LF ++    +RP+ VT +SVL AC+  G +  G  I        GFK     
Sbjct: 121 GKPNEAIDLFMKLEDEAVRPNEVTVVSVLAACADLGDLDLG-RIVHEYSTKSGFKRNVHV 179

Query: 552 YACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIH 594
              ++D+  + G LE A      +  E     W A++    +H
Sbjct: 180 CNTLIDMYVKCGCLENARRVFYEME-ERTVVSWSAMIAGLAMH 221



 Score = 75.9 bits (185), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 54/232 (23%), Positives = 113/232 (48%), Gaps = 12/232 (5%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           A   F  +P  ++  +  +I GF     P  +I  +  L ++ A+ P+  T   VL+A +
Sbjct: 95  AYGFFLRMPNKNVRSWTSMISGFVQCGKPNEAIDLFMKL-EDEAVRPNEVTVVSVLAACA 153

Query: 120 ACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNS 179
              D  +G ++H ++  SG+  ++ V   L+D+Y K   +++AR+VF +M E+  V W++
Sbjct: 154 DLGDLDLGRIVHEYSTKSGFKRNVHVCNTLIDMYVKCGCLENARRVFYEMEERTVVSWSA 213

Query: 180 MISGLMKNCCFQDSIWVFGDMVR-----NGGTWLDSTSVAAVLPAVAEVQELRLGMEIQC 234
           MI+GL  +   ++++ +F +M++     NG T++      + +  + E +     M    
Sbjct: 214 MIAGLAMHGQAEEALCLFSEMIKLGVKPNGVTFIGLLHACSHMGLIDEGRRFFASMTAD- 272

Query: 235 LGLKLGFHDHVYVLTGLVSFYSKCGEVERA-ELLFRDIVRPDLISCNAMISG 285
                G    +     +V  +S+ G +E A E +    ++P+ +   A++ G
Sbjct: 273 ----YGVIPQIEHYGCVVDLFSRAGLLEEAHEFILSMPIKPNGVVWGALLGG 320


>gi|11994503|dbj|BAB02568.1| unnamed protein product [Arabidopsis thaliana]
          Length = 1161

 Score =  422 bits (1085), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 232/650 (35%), Positives = 359/650 (55%), Gaps = 9/650 (1%)

Query: 142  DLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMV 201
            +L     L+D+Y K      A KVFD MPE++ V W++++SG + N   + S+ +F +M 
Sbjct: 411  NLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMG 470

Query: 202  RNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEV 261
            R G  + +  + +  L A   +  L  G++I    LK+GF   V V   LV  YSKCG +
Sbjct: 471  RQG-IYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRI 529

Query: 262  ERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLAS--AERVNSSTIVGLIP 319
              AE +FR IV   LIS NAMI+G+   G    +L  F  +  +   ER +  T+  L+ 
Sbjct: 530  NEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLK 589

Query: 320  VFYPFGHLHLTNCIHSFCLKSGI--VSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSL 377
                 G ++    IH F ++SG    S++++  +L  +Y +   + +ARK FD+  EK++
Sbjct: 590  ACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTM 649

Query: 378  ASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHEL 437
             SW+++I GY Q G   EA+ LF+ +Q      +   +SSI+   A    +  GK +  L
Sbjct: 650  ISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQAL 709

Query: 438  VKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEA 497
                       V  +++DMY KCG + EA + F  M  K  ++W  +I+GYG HG G ++
Sbjct: 710  AVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKS 769

Query: 498  LQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVD 557
            +++F EML   I P  V +L+VL ACSH+G+++EG+E+F  ++  HG KP  EHYAC+VD
Sbjct: 770  VRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVD 829

Query: 558  ILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGY 617
            +LGRAG+L++A   I  + ++P   +W  LL  C +H D  L +   + L  +D +N   
Sbjct: 830  LLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDAKNPAN 889

Query: 618  HVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAI 677
            +V++SN+Y     + +    R++   + L K  G + +E+    H F SG+  HP +  I
Sbjct: 890  YVMMSNLYGQAGYWNEQGNARELGNIKGLKKEAGMSWVEIEREVHFFRSGEDSHPLTPVI 949

Query: 678  YAMLEKLNGKMREA-GFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIA---TEPGT 733
               L++   ++RE  G+       LHD+++E KE  ++ HSEKLAI   L      + G 
Sbjct: 950  QETLKEAERRLREELGYVYGLKHELHDIDDESKEENLRAHSEKLAIGLALATGGLNQKGK 1009

Query: 734  EIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDY 783
             IR+ KNLRVC+DCH   K +SK+T    VVRDA RFH F+ G CSCGDY
Sbjct: 1010 TIRVFKNLRVCVDCHEFIKGLSKITKIAYVVRDAVRFHSFEDGCCSCGDY 1059



 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 114/438 (26%), Positives = 215/438 (49%), Gaps = 6/438 (1%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           A  +F S+P+ ++  ++ ++ G   N   K S+  ++ + +   + P+ FT+S  L A  
Sbjct: 431 AYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQ-GIYPNEFTFSTNLKACG 489

Query: 120 ACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNS 179
                  G+ +HG  +  G+   + VG +LVD+Y K   +  A KVF ++ ++  + WN+
Sbjct: 490 LLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNA 549

Query: 180 MISGLMKNCCFQDSIWVFGDMVR-NGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLK 238
           MI+G +       ++  FG M   N     D  ++ ++L A +    +  G +I    ++
Sbjct: 550 MIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVR 609

Query: 239 LGFH--DHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSL 296
            GFH      +   LV  Y KCG +  A   F  I    +IS +++I GY   G+   ++
Sbjct: 610 SGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAM 669

Query: 297 RLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVY 356
            LF++L     +++S  +  +I VF  F  L     + +  +K      +SVL ++  +Y
Sbjct: 670 GLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMY 729

Query: 357 SRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVS 416
            +   ++ A K F E   K + SW  +I GY ++GL ++++ +F EM    + P+ V   
Sbjct: 730 LKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYL 789

Query: 417 SILSACAQLGAISLGKWV-HELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSH 475
           ++LSAC+  G I  G+ +  +L+++   +  +     ++D+  + G + EA+ L D M  
Sbjct: 790 AVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPI 849

Query: 476 KSEV-TWNTMISGYGLHG 492
           K  V  W T++S   +HG
Sbjct: 850 KPNVGIWQTLLSLCRVHG 867


>gi|356498444|ref|XP_003518062.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g13770, mitochondrial-like [Glycine max]
          Length = 634

 Score =  422 bits (1084), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 215/571 (37%), Positives = 334/571 (58%), Gaps = 2/571 (0%)

Query: 216 VLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPD 275
           VL      + +R G  +    +K  +   VY+ T L+ FY KC  +  A  +F  +   +
Sbjct: 64  VLNECLRKRAIREGQRVHAHMIKTHYLPCVYLRTRLIVFYVKCDSLRDARHVFDVMPERN 123

Query: 276 LISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHS 335
           ++S  AMIS Y+  G    +L LF Q+L S    N  T   ++          L   IHS
Sbjct: 124 VVSWTAMISAYSQRGYASQALSLFVQMLRSGTEPNEFTFATVLTSCIGSSGFVLGRQIHS 183

Query: 336 FCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEE 395
             +K    ++  V ++L  +Y++  ++  AR +F    E+ + S  A+I+GY Q GL EE
Sbjct: 184 HIIKLNYEAHVYVGSSLLDMYAKDGKIHEARGIFQCLPERDVVSCTAIISGYAQLGLDEE 243

Query: 396 AISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALID 455
           A+ LF+ +Q   +  N VT +S+L+A + L A+  GK VH  +      S + +  +LID
Sbjct: 244 ALELFRRLQREGMQSNYVTYTSVLTALSGLAALDHGKQVHNHLLRSEVPSYVVLQNSLID 303

Query: 456 MYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEML-HSGIRPSGV 514
           MY+KCGN+  AR +FD +  ++ ++WN M+ GY  HG G E L+LF+ M+  + ++P  V
Sbjct: 304 MYSKCGNLTYARRIFDTLHERTVISWNAMLVGYSKHGEGREVLELFNLMIDENKVKPDSV 363

Query: 515 TFLSVLYACSHAGLVREGDEIFQSMIHDH-GFKPLAEHYACMVDILGRAGQLEKALEFIK 573
           T L+VL  CSH GL  +G +IF  M       +P ++HY C+VD+LGRAG++E A EF+K
Sbjct: 364 TVLAVLSGCSHGGLEDKGMDIFYDMTSGKISVQPDSKHYGCVVDMLGRAGRVEAAFEFVK 423

Query: 574 GLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQ 633
            +  EP  A+WG LLGAC +H + ++      +L +++PEN G +V+LSN+Y++   +  
Sbjct: 424 KMPFEPSAAIWGCLLGACSVHSNLDIGEFVGHQLLQIEPENAGNYVILSNLYASAGRWED 483

Query: 634 AATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGF 693
             ++R ++ K+ + K PG + IE+    H F + D  HP+   + A +++L+ + +EAG+
Sbjct: 484 VRSLRNLMLKKAVTKEPGRSWIELDQVLHTFHASDCSHPRREEVSAKVQELSARFKEAGY 543

Query: 694 QTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKF 753
             +    LHDV+EE+KE ++  HSEKLA+ FGLIAT     IR+IKNLR+C+DCH   K+
Sbjct: 544 VPDLSCVLHDVDEEQKEKILLSHSEKLALTFGLIATPESVPIRVIKNLRICVDCHNFAKY 603

Query: 754 ISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
            SK+ GR + +RD NRFH   GG CSCGDYW
Sbjct: 604 TSKIYGREVSLRDKNRFHRIVGGKCSCGDYW 634



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 106/369 (28%), Positives = 185/369 (50%), Gaps = 5/369 (1%)

Query: 127 GVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMK 186
           G  +H H I + Y   +++   L+  Y K   ++ AR VFD MPE++ V W +MIS   +
Sbjct: 77  GQRVHAHMIKTHYLPCVYLRTRLIVFYVKCDSLRDARHVFDVMPERNVVSWTAMISAYSQ 136

Query: 187 NCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVY 246
                 ++ +F  M+R+G T  +  + A VL +        LG +I    +KL +  HVY
Sbjct: 137 RGYASQALSLFVQMLRSG-TEPNEFTFATVLTSCIGSSGFVLGRQIHSHIIKLNYEAHVY 195

Query: 247 VLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASA 306
           V + L+  Y+K G++  A  +F+ +   D++SC A+ISGY   G  E +L LFR+L    
Sbjct: 196 VGSSLLDMYAKDGKIHEARGIFQCLPERDVVSCTAIISGYAQLGLDEEALELFRRLQREG 255

Query: 307 ERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAAR 366
            + N  T   ++        L     +H+  L+S + S   +  +L  +YS+   +  AR
Sbjct: 256 MQSNYVTYTSVLTALSGLAALDHGKQVHNHLLRSEVPSYVVLQNSLIDMYSKCGNLTYAR 315

Query: 367 KLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEM-QASKVAPNPVTVSSILSACAQL 425
           ++FD   E+++ SWNAM+ GY+++G   E + LF  M   +KV P+ VTV ++LS C+  
Sbjct: 316 RIFDTLHERTVISWNAMLVGYSKHGEGREVLELFNLMIDENKVKPDSVTVLAVLSGCSHG 375

Query: 426 GAISLGKWV-HELVKSR-NFESNIYVSTALIDMYAKCGNIVEARELFDLMSHK-SEVTWN 482
           G    G  + +++   + + + +      ++DM  + G +  A E    M  + S   W 
Sbjct: 376 GLEDKGMDIFYDMTSGKISVQPDSKHYGCVVDMLGRAGRVEAAFEFVKKMPFEPSAAIWG 435

Query: 483 TMISGYGLH 491
            ++    +H
Sbjct: 436 CLLGACSVH 444



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 94/419 (22%), Positives = 187/419 (44%), Gaps = 36/419 (8%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           AR +F  +P+ ++  +  +I  +S       ++  +  + + +   P+ FT++ VL++  
Sbjct: 112 ARHVFDVMPERNVVSWTAMISAYSQRGYASQALSLFVQMLR-SGTEPNEFTFATVLTSCI 170

Query: 120 ACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNS 179
                 +G  +H H I   Y + ++VG++L+D+Y K   +  AR +F  +PE+D V   +
Sbjct: 171 GSSGFVLGRQIHSHIIKLNYEAHVYVGSSLLDMYAKDGKIHEARGIFQCLPERDVVSCTA 230

Query: 180 MISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKL 239
           +ISG  +    ++++ +F  + R  G   +  +  +VL A++ +  L  G ++    L+ 
Sbjct: 231 IISGYAQLGLDEEALELFRRLQRE-GMQSNYVTYTSVLTALSGLAALDHGKQVHNHLLRS 289

Query: 240 GFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLF 299
               +V +   L+  YSKCG +  A  +F  +    +IS NAM+ GY+ +G+    L LF
Sbjct: 290 EVPSYVVLQNSLIDMYSKCGNLTYARRIFDTLHERTVISWNAMLVGYSKHGEGREVLELF 349

Query: 300 RQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRL 359
             L+    +V   ++  L           L+ C H      G          +   Y   
Sbjct: 350 -NLMIDENKVKPDSVTVLAV---------LSGCSHGGLEDKG----------MDIFY--- 386

Query: 360 NEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSIL 419
            +M + +      S+     +  ++    + G  E A    ++M      P+      +L
Sbjct: 387 -DMTSGKISVQPDSKH----YGCVVDMLGRAGRVEAAFEFVKKM---PFEPSAAIWGCLL 438

Query: 420 SACAQLGAISLGKWV-HELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKS 477
            AC+    + +G++V H+L++     +  YV   L ++YA  G   + R L +LM  K+
Sbjct: 439 GACSVHSNLDIGEFVGHQLLQIEPENAGNYV--ILSNLYASAGRWEDVRSLRNLMLKKA 495



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 48/157 (30%), Positives = 84/157 (53%), Gaps = 9/157 (5%)

Query: 416 SSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSH 475
           +++L+ C +  AI  G+ VH  +   ++   +Y+ T LI  Y KC ++ +AR +FD+M  
Sbjct: 62  NTVLNECLRKRAIREGQRVHAHMIKTHYLPCVYLRTRLIVFYVKCDSLRDARHVFDVMPE 121

Query: 476 KSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEI 535
           ++ V+W  MIS Y   G+  +AL LF +ML SG  P+  TF +VL +C     +     +
Sbjct: 122 RNVVSWTAMISAYSQRGYASQALSLFVQMLRSGTEPNEFTFATVLTSC-----IGSSGFV 176

Query: 536 FQSMIHDHGFKPLAEHY----ACMVDILGRAGQLEKA 568
               IH H  K   E +    + ++D+  + G++ +A
Sbjct: 177 LGRQIHSHIIKLNYEAHVYVGSSLLDMYAKDGKIHEA 213



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 55/244 (22%), Positives = 109/244 (44%), Gaps = 19/244 (7%)

Query: 7   QSRNLFLSLLKGAKTQSQLT------------------QTHAQIIIHGFQNDLSTVTKLA 48
           Q+ +LF+ +L+     ++ T                  Q H+ II   ++  +   + L 
Sbjct: 142 QALSLFVQMLRSGTEPNEFTFATVLTSCIGSSGFVLGRQIHSHIIKLNYEAHVYVGSSLL 201

Query: 49  HRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDN 108
              +       AR +F  +P+ D+     II G++   + + ++  +  L++   +  + 
Sbjct: 202 DMYAKDGKIHEARGIFQCLPERDVVSCTAIISGYAQLGLDEEALELFRRLQRE-GMQSNY 260

Query: 109 FTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDK 168
            TY+ VL+A S       G  +H H + S   S + +  +L+D+Y K   +  AR++FD 
Sbjct: 261 VTYTSVLTALSGLAALDHGKQVHNHLLRSEVPSYVVLQNSLIDMYSKCGNLTYARRIFDT 320

Query: 169 MPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRL 228
           + E+  + WN+M+ G  K+   ++ + +F  M+       DS +V AVL   +       
Sbjct: 321 LHERTVISWNAMLVGYSKHGEGREVLELFNLMIDENKVKPDSVTVLAVLSGCSHGGLEDK 380

Query: 229 GMEI 232
           GM+I
Sbjct: 381 GMDI 384


>gi|296084465|emb|CBI25024.3| unnamed protein product [Vitis vinifera]
          Length = 621

 Score =  421 bits (1083), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 231/556 (41%), Positives = 331/556 (59%)

Query: 229 GMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTC 288
           GM      +++G          L++ YSKCG VE A  LF ++    L+S N M+  +T 
Sbjct: 66  GMACHAQIIRVGLRADTITSNMLMNMYSKCGLVESARKLFDEMPVRSLVSWNTMVGSHTQ 125

Query: 289 NGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSV 348
           NG  E +L LF Q+       +  T+  ++        +     +H F LK+ + SN  V
Sbjct: 126 NGDCEKALVLFMQMQKEGTSCSEFTVSSVVCACAAKCCVFECKQLHGFALKTALDSNVFV 185

Query: 349 LTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKV 408
            TAL  VY++   ++ A  +F+   E+S  +W++M+AGY QN L EEA+ LF   QA  +
Sbjct: 186 GTALLDVYAKCGLVKDANLVFECMPERSDVTWSSMVAGYVQNELYEEALVLFHRAQAMGL 245

Query: 409 APNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARE 468
             N  T+SS LSACA   A+  GK V  +       SNI+V ++LIDMYAKCG I EA  
Sbjct: 246 EHNQFTISSALSACAARAALIEGKQVQAVSCKTGIGSNIFVISSLIDMYAKCGIIEEAYT 305

Query: 469 LFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGL 528
           +F  +  K+ V WN ++SG+  H   LEA+  F +M   GI P+ +T++SVL ACSH GL
Sbjct: 306 VFSSVEEKNVVLWNAILSGFSRHVRSLEAMIYFEKMQQMGICPNDITYISVLSACSHLGL 365

Query: 529 VREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALL 588
           V +G + F  MI  H   P   HY+CMVDILGRAG L +A +FI  +  +   ++WG+LL
Sbjct: 366 VEKGRKYFDLMIRVHNVSPNVLHYSCMVDILGRAGLLHEAKDFIDRMPFDATASMWGSLL 425

Query: 589 GACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAK 648
            +C I+++  LA VA++ LFE++P N G HVLLSNIY+A   + + A  R ++K+ K  K
Sbjct: 426 ASCRIYRNLELAEVAAKHLFEIEPHNAGNHVLLSNIYAANDRWEEVARARNLLKESKAKK 485

Query: 649 APGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEE 708
             G + IE+    H F  G++ HP+   IY  LE L G+M++ G++ +T   LHDVEE  
Sbjct: 486 ERGKSWIEIKHKVHSFMVGERNHPRIVEIYLKLEDLVGEMKKIGYKAKTEHDLHDVEESR 545

Query: 709 KELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDAN 768
           K+ +++ HSEKLA+ FG++    G  IRI+KNLR+C DCH+  K  S +T R I+VRD N
Sbjct: 546 KQELLRHHSEKLALTFGIMVLPHGAPIRIMKNLRICGDCHSFMKLASSITEREIIVRDTN 605

Query: 769 RFHHFKGGVCSCGDYW 784
           RFHHFK G CSCG++W
Sbjct: 606 RFHHFKNGYCSCGEFW 621



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 100/362 (27%), Positives = 188/362 (51%), Gaps = 3/362 (0%)

Query: 127 GVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMK 186
           G+  H   I  G  +D      L+++Y K   V+SARK+FD+MP +  V WN+M+    +
Sbjct: 66  GMACHAQIIRVGLRADTITSNMLMNMYSKCGLVESARKLFDEMPVRSLVSWNTMVGSHTQ 125

Query: 187 NCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVY 246
           N   + ++ +F  M +  GT     +V++V+ A A    +    ++    LK     +V+
Sbjct: 126 NGDCEKALVLFMQMQKE-GTSCSEFTVSSVVCACAAKCCVFECKQLHGFALKTALDSNVF 184

Query: 247 VLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASA 306
           V T L+  Y+KCG V+ A L+F  +     ++ ++M++GY  N   E +L LF +  A  
Sbjct: 185 VGTALLDVYAKCGLVKDANLVFECMPERSDVTWSSMVAGYVQNELYEEALVLFHRAQAMG 244

Query: 307 ERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAAR 366
              N  TI   +        L     + +   K+GI SN  V+++L  +Y++   +E A 
Sbjct: 245 LEHNQFTISSALSACAARAALIEGKQVQAVSCKTGIGSNIFVISSLIDMYAKCGIIEEAY 304

Query: 367 KLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLG 426
            +F    EK++  WNA+++G++++  + EA+  F++MQ   + PN +T  S+LSAC+ LG
Sbjct: 305 TVFSSVEEKNVVLWNAILSGFSRHVRSLEAMIYFEKMQQMGICPNDITYISVLSACSHLG 364

Query: 427 AISLG-KWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVT-WNTM 484
            +  G K+   +++  N   N+   + ++D+  + G + EA++  D M   +  + W ++
Sbjct: 365 LVEKGRKYFDLMIRVHNVSPNVLHYSCMVDILGRAGLLHEAKDFIDRMPFDATASMWGSL 424

Query: 485 IS 486
           ++
Sbjct: 425 LA 426



 Score =  116 bits (290), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 105/420 (25%), Positives = 197/420 (46%), Gaps = 17/420 (4%)

Query: 29  HAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNEMP 88
           HAQII  G + D  T   L +  S       AR LF  +P   L  +N ++   + N   
Sbjct: 70  HAQIIRVGLRADTITSNMLMNMYSKCGLVESARKLFDEMPVRSLVSWNTMVGSHTQNGDC 129

Query: 89  KSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAA 148
           + ++  +  ++K    +   FT S V+ A +A C       LHG A+ +   S++FVG A
Sbjct: 130 EKALVLFMQMQKE-GTSCSEFTVSSVVCACAAKCCVFECKQLHGFALKTALDSNVFVGTA 188

Query: 149 LVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWL 208
           L+D+Y K   VK A  VF+ MPE+  V W+SM++G ++N  +++++ +F    +  G   
Sbjct: 189 LLDVYAKCGLVKDANLVFECMPERSDVTWSSMVAGYVQNELYEEALVLF-HRAQAMGLEH 247

Query: 209 DSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLF 268
           +  ++++ L A A    L  G ++Q +  K G   +++V++ L+  Y+KCG +E A  +F
Sbjct: 248 NQFTISSALSACAARAALIEGKQVQAVSCKTGIGSNIFVISSLIDMYAKCGIIEEAYTVF 307

Query: 269 RDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLH 328
             +   +++  NA++SG++ + ++  ++  F ++       N  T + ++      G + 
Sbjct: 308 SSVEEKNVVLWNAILSGFSRHVRSLEAMIYFEKMQQMGICPNDITYISVLSACSHLGLVE 367

Query: 329 LTNCIHSFCLKSGIVS-NSSVLTALSTVYSRLNEMEAARKLFDESSEKSLAS-WNAMIAG 386
                    ++   VS N    + +  +  R   +  A+   D     + AS W +++A 
Sbjct: 368 KGRKYFDLMIRVHNVSPNVLHYSCMVDILGRAGLLHEAKDFIDRMPFDATASMWGSLLAS 427

Query: 387 ---YTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNF 443
              Y    L E A     E++    A N V +S+I +A          +W  E+ ++RN 
Sbjct: 428 CRIYRNLELAEVAAKHLFEIEPHN-AGNHVLLSNIYAAN--------DRW-EEVARARNL 477



 Score = 62.8 bits (151), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 42/128 (32%), Positives = 64/128 (50%), Gaps = 7/128 (5%)

Query: 418 ILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKS 477
           +L + A+  A   G   H  +      ++   S  L++MY+KCG +  AR+LFD M  +S
Sbjct: 53  LLQSSARNRAAIEGMACHAQIIRVGLRADTITSNMLMNMYSKCGLVESARKLFDEMPVRS 112

Query: 478 EVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQ 537
            V+WNTM+  +  +G   +AL LF +M   G   S  T  SV+ AC+    V E  ++  
Sbjct: 113 LVSWNTMVGSHTQNGDCEKALVLFMQMQKEGTSCSEFTVSSVVCACAAKCCVFECKQL-- 170

Query: 538 SMIHDHGF 545
                HGF
Sbjct: 171 -----HGF 173


>gi|413946633|gb|AFW79282.1| hypothetical protein ZEAMMB73_599854 [Zea mays]
          Length = 863

 Score =  421 bits (1083), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 254/732 (34%), Positives = 391/732 (53%), Gaps = 5/732 (0%)

Query: 51  LSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFT 110
           L  F  T +A  +F  +P+ D+F +NV++ G+  + +   ++  Y H      + PD +T
Sbjct: 133 LVRFGETWHAWRVFAKMPERDVFSWNVMVGGYGKSGLLDEALDLY-HRMMWAGVRPDVYT 191

Query: 111 YSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMP 170
           +  VL +     D  +G  +H H +  G+G ++ V  AL+ +Y K   V +ARKVFD M 
Sbjct: 192 FPCVLRSCGGVPDWRMGREVHAHVLRFGFGEEVDVLNALMTMYAKCGDVMAARKVFDSMT 251

Query: 171 EKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGM 230
             D + WN+MI+G  +N      + +F  M+ +     +  ++ +V  A   + ++    
Sbjct: 252 VMDCISWNAMIAGHFENGECNAGLELFLTMLHDE-VQPNLMTITSVTVASGLLSDVTFAK 310

Query: 231 EIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNG 290
           E+  L +K GF   V     L+  Y+  G + +A  +F  +   D ++  AMISGY  NG
Sbjct: 311 EMHGLAVKRGFAGDVAFCNSLIQMYASLGMMRQARTVFSRMDTRDAMTWTAMISGYEKNG 370

Query: 291 KTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLT 350
             + +L ++  +  +    +  TI   +      G L +   +H      G +S   V  
Sbjct: 371 FPDKALEVYALMEVNNVSPDDITIASALAACACLGSLDVGVKLHELAESKGFISYIVVTN 430

Query: 351 ALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAP 410
           A+  +Y++   ++ A ++F    EK + SW++MIAG+  N    EA+  F+ M A  V P
Sbjct: 431 AILEMYAKSKRIDKAIEVFKCMHEKDVVSWSSMIAGFCFNHRNFEALYYFRHMLAD-VKP 489

Query: 411 NPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELF 470
           N VT  + L+ACA  GA+  GK +H  V     E   Y+  ALID+Y KCG    A   F
Sbjct: 490 NSVTFIAALAACAATGALRSGKEIHAHVLRCGIEYEGYLPNALIDLYVKCGQTGYAWAQF 549

Query: 471 DLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVR 530
                K  V+WN MI+G+  HGHG  AL  F++M+  G  P  VTF+++L ACS  G+V 
Sbjct: 550 CAHGAKDVVSWNIMIAGFVAHGHGDTALSFFNQMVKIGECPDEVTFVALLCACSRGGMVS 609

Query: 531 EGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGA 590
           EG E+F SM   +   P  +HYACMVD+L RAGQL +A  FI  + + P  AVWGALL  
Sbjct: 610 EGWELFHSMTEKYSIVPNLKHYACMVDLLSRAGQLTEAYNFINEMPITPDAAVWGALLNG 669

Query: 591 CMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAP 650
           C IH+   L  +A++ +  L+P + GYHVLL ++Y+    + + A VR+ ++++ L    
Sbjct: 670 CRIHRHVELGELAAKYVLALEPNDAGYHVLLCDLYADACLWDKLARVRKTMREKGLDHDS 729

Query: 651 GCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKE 710
           GC+ +EV G  H F + D+ HPQ   I  +LE +  +M+ +G+    V +    +E  K+
Sbjct: 730 GCSWVEVKGVVHAFLTDDESHPQIREINTVLEGIYERMKASGYA--PVESHCPEDEVLKD 787

Query: 711 LMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRF 770
            +   HSE+LA+AFGLI T PGT I + KN   C  CH   K IS +  R I+VRD+ + 
Sbjct: 788 DIFCGHSERLAVAFGLINTTPGTSISVTKNQYTCQSCHRILKMISNIVRRDIIVRDSKQL 847

Query: 771 HHFKGGVCSCGD 782
           HHFK G CSCGD
Sbjct: 848 HHFKDGSCSCGD 859



 Score =  212 bits (540), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 137/426 (32%), Positives = 230/426 (53%), Gaps = 11/426 (2%)

Query: 143 LFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVR 202
           L +G A++ +  +F     A +VF KMPE+D   WN M+ G  K+    +++ ++  M+ 
Sbjct: 123 LRLGNAMLSMLVRFGETWHAWRVFAKMPERDVFSWNVMVGGYGKSGLLDEALDLYHRMMW 182

Query: 203 NGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVE 262
             G   D  +   VL +   V + R+G E+    L+ GF + V VL  L++ Y+KCG+V 
Sbjct: 183 -AGVRPDVYTFPCVLRSCGGVPDWRMGREVHAHVLRFGFGEEVDVLNALMTMYAKCGDVM 241

Query: 263 RAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFY 322
            A  +F  +   D IS NAMI+G+  NG+  + L LF  +L    + N  TI  +     
Sbjct: 242 AARKVFDSMTVMDCISWNAMIAGHFENGECNAGLELFLTMLHDEVQPNLMTITSVTVASG 301

Query: 323 PFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNA 382
               +     +H   +K G   + +   +L  +Y+ L  M  AR +F     +   +W A
Sbjct: 302 LLSDVTFAKEMHGLAVKRGFAGDVAFCNSLIQMYASLGMMRQARTVFSRMDTRDAMTWTA 361

Query: 383 MIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRN 442
           MI+GY +NG  ++A+ ++  M+ + V+P+ +T++S L+ACA LG++ +G  +HEL +S+ 
Sbjct: 362 MISGYEKNGFPDKALEVYALMEVNNVSPDDITIASALAACACLGSLDVGVKLHELAESKG 421

Query: 443 FESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFS 502
           F S I V+ A+++MYAK   I +A E+F  M  K  V+W++MI+G+  +    EAL  F 
Sbjct: 422 FISYIVVTNAILEMYAKSKRIDKAIEVFKCMHEKDVVSWSSMIAGFCFNHRNFEALYYFR 481

Query: 503 EMLHSGIRPSGVTFLSVLYACSHAGLVREGDEI----FQSMIHDHGFKPLAEHYACMVDI 558
            ML + ++P+ VTF++ L AC+  G +R G EI     +  I   G+ P A     ++D+
Sbjct: 482 HML-ADVKPNSVTFIAALAACAATGALRSGKEIHAHVLRCGIEYEGYLPNA-----LIDL 535

Query: 559 LGRAGQ 564
             + GQ
Sbjct: 536 YVKCGQ 541



 Score =  162 bits (410), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 121/470 (25%), Positives = 220/470 (46%), Gaps = 7/470 (1%)

Query: 27  QTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRG-FSNN 85
           + HA ++  GF  ++  +  L    +       AR +F S+   D   +N +I G F N 
Sbjct: 210 EVHAHVLRFGFGEEVDVLNALMTMYAKCGDVMAARKVFDSMTVMDCISWNAMIAGHFENG 269

Query: 86  EMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFV 145
           E       F T L     + P+  T + V  A+    D +    +HG A+  G+  D+  
Sbjct: 270 ECNAGLELFLTMLHDE--VQPNLMTITSVTVASGLLSDVTFAKEMHGLAVKRGFAGDVAF 327

Query: 146 GAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGG 205
             +L+ +Y     ++ AR VF +M  +D + W +MISG  KN     ++ V+  M  N  
Sbjct: 328 CNSLIQMYASLGMMRQARTVFSRMDTRDAMTWTAMISGYEKNGFPDKALEVYALMEVNNV 387

Query: 206 TWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAE 265
           +  D  ++A+ L A A +  L +G+++  L    GF  ++ V   ++  Y+K   +++A 
Sbjct: 388 S-PDDITIASALAACACLGSLDVGVKLHELAESKGFISYIVVTNAILEMYAKSKRIDKAI 446

Query: 266 LLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFG 325
            +F+ +   D++S ++MI+G+  N +   +L  FR +LA   + NS T +  +      G
Sbjct: 447 EVFKCMHEKDVVSWSSMIAGFCFNHRNFEALYYFRHMLADV-KPNSVTFIAALAACAATG 505

Query: 326 HLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIA 385
            L     IH+  L+ GI     +  AL  +Y +  +   A   F     K + SWN MIA
Sbjct: 506 ALRSGKEIHAHVLRCGIEYEGYLPNALIDLYVKCGQTGYAWAQFCAHGAKDVVSWNIMIA 565

Query: 386 GYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLG-KWVHELVKSRNFE 444
           G+  +G  + A+S F +M      P+ VT  ++L AC++ G +S G +  H + +  +  
Sbjct: 566 GFVAHGHGDTALSFFNQMVKIGECPDEVTFVALLCACSRGGMVSEGWELFHSMTEKYSIV 625

Query: 445 SNIYVSTALIDMYAKCGNIVEARELFDLMSHKSE-VTWNTMISGYGLHGH 493
            N+     ++D+ ++ G + EA    + M    +   W  +++G  +H H
Sbjct: 626 PNLKHYACMVDLLSRAGQLTEAYNFINEMPITPDAAVWGALLNGCRIHRH 675



 Score = 59.7 bits (143), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 40/175 (22%), Positives = 73/175 (41%), Gaps = 1/175 (0%)

Query: 403 MQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGN 462
           +++S   P+     ++   C    A+  G         R+    + +  A++ M  + G 
Sbjct: 79  LESSAEPPDEDAYVALFRLCEWRRAVEPGLRACAHADDRHAWFGLRLGNAMLSMLVRFGE 138

Query: 463 IVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYA 522
              A  +F  M  +   +WN M+ GYG  G   EAL L+  M+ +G+RP   TF  VL +
Sbjct: 139 TWHAWRVFAKMPERDVFSWNVMVGGYGKSGLLDEALDLYHRMMWAGVRPDVYTFPCVLRS 198

Query: 523 CSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAV 577
           C      R G E+   ++   GF    +    ++ +  + G +  A +    + V
Sbjct: 199 CGGVPDWRMGREVHAHVLR-FGFGEEVDVLNALMTMYAKCGDVMAARKVFDSMTV 252


>gi|224125332|ref|XP_002329779.1| predicted protein [Populus trichocarpa]
 gi|222870841|gb|EEF07972.1| predicted protein [Populus trichocarpa]
          Length = 585

 Score =  421 bits (1083), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 224/540 (41%), Positives = 331/540 (61%), Gaps = 2/540 (0%)

Query: 247 VLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMI-SGYTCNGKTESSLRLFRQLLAS 305
           +LT L++     G +     +F  +  PD     ++I S    +  +  SL  + +++ S
Sbjct: 46  LLTKLLNLACAAGSISYTRQIFLAVPNPDSFLFTSLIKSTSKSHNFSIYSLYFYSRMVLS 105

Query: 306 AERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAA 365
               ++ T   +I        L     +H   L  G   +  V  AL  +Y +  ++  A
Sbjct: 106 NVSPSNYTFTSVIKSCADLSALKHGRVVHGHVLVHGFGLDVYVQAALVALYGKCGDLINA 165

Query: 366 RKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQL 425
           RK+FD+  E+S+ +WN+MI+GY QNG  +EAI LF  M+ + V P+  T  S+LSACA L
Sbjct: 166 RKVFDKIRERSIVAWNSMISGYEQNGFAKEAIGLFDRMKETGVEPDSATFVSVLSACAHL 225

Query: 426 GAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMI 485
           GA SLG WVHE +     + N+ + T+LI+MY +CGN+ +ARE+FD M  ++ V W  MI
Sbjct: 226 GAFSLGCWVHEYIVGNGLDLNVVLGTSLINMYIRCGNVSKAREVFDSMKERNVVAWTAMI 285

Query: 486 SGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGF 545
           SGYG +G+G +A++LF EM  +G+ P+ +TF++VL AC+HAGLV EG  +F S+  ++  
Sbjct: 286 SGYGTNGYGSQAVELFHEMRRNGLFPNSITFVAVLSACAHAGLVNEGRRLFASIREEYHL 345

Query: 546 KPLAEHYACMVDILGRAGQLEKALEFIKGLAVE-PGPAVWGALLGACMIHKDTNLARVAS 604
            P  EH  C+VD+LGRAG L++A  FIK    E P PA+  A+LGAC +HK+ +L    +
Sbjct: 346 VPGVEHNVCLVDMLGRAGLLDEAYNFIKEEIPENPAPAILTAMLGACKMHKNFDLGAQVA 405

Query: 605 EKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVF 664
           E L   +PEN  ++V+LSNIY+      Q   VR  + ++ L K  G + +EV    ++F
Sbjct: 406 EHLLAAEPENPAHYVILSNIYALAGRMDQVEIVRNNMIRKCLKKQVGYSTVEVDQKTYLF 465

Query: 665 TSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAF 724
           + GD+ H ++ AIY  L++L  K  EAG+   + + +H++EEEE+E  ++ HSEKLAIAF
Sbjct: 466 SMGDKSHSETNAIYHYLDELMWKCSEAGYVPVSDSVMHELEEEEREYALRYHSEKLAIAF 525

Query: 725 GLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           GL+ T  GT IRI+KNLR+C DCH+A KFIS ++ R I+VRD  RFHHFK G CSC DYW
Sbjct: 526 GLLKTSHGTPIRIVKNLRMCEDCHSAIKFISAISSREIIVRDKLRFHHFKVGSCSCLDYW 585



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 136/468 (29%), Positives = 221/468 (47%), Gaps = 50/468 (10%)

Query: 3   MKTPQSRNLFLS-----LLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKAT 57
           M+T Q   L  S     LL+       L Q HA II+ G+    S +TKL +      + 
Sbjct: 1   METKQPHKLPHSPAYNFLLQAGPRLYLLHQVHAHIIVSGYGRSRSLLTKLLNLACAAGSI 60

Query: 58  CYARALFFSIPKPDLFLFNVIIRGFS-NNEMPKSSICFYTHLRKNTALTPDNFTYSFVLS 116
            Y R +F ++P PD FLF  +I+  S ++     S+ FY+ +  +  ++P N+T++ V+ 
Sbjct: 61  SYTRQIFLAVPNPDSFLFTSLIKSTSKSHNFSIYSLYFYSRMVLSN-VSPSNYTFTSVIK 119

Query: 117 AASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVL 176
           + +       G ++HGH +V G+G D++V AALV LY K   + +ARKVFDK+ E+  V 
Sbjct: 120 SCADLSALKHGRVVHGHVLVHGFGLDVYVQAALVALYGKCGDLINARKVFDKIRERSIVA 179

Query: 177 WNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLG 236
           WNSMISG  +N   +++I +F D ++  G   DS +  +VL A A +    LG  +    
Sbjct: 180 WNSMISGYEQNGFAKEAIGLF-DRMKETGVEPDSATFVSVLSACAHLGAFSLGCWVHEYI 238

Query: 237 LKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSL 296
           +  G   +V + T L++ Y +CG V +A  +F  +   ++++  AMISGY  NG    ++
Sbjct: 239 VGNGLDLNVVLGTSLINMYIRCGNVSKAREVFDSMKERNVVAWTAMISGYGTNGYGSQAV 298

Query: 297 RLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTA-LSTV 355
            LF ++  +    NS T V ++                S C  +G+V+    L A +   
Sbjct: 299 ELFHEMRRNGLFPNSITFVAVL----------------SACAHAGLVNEGRRLFASIREE 342

Query: 356 YSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTV 415
           Y  +  +E    L D            M+    + GL +EA +  +E       P P  +
Sbjct: 343 YHLVPGVEHNVCLVD------------MLG---RAGLLDEAYNFIKEEIPEN--PAPAIL 385

Query: 416 SSILSACAQLGAISLGKWVHELVKSRNFE--------SNIYVSTALID 455
           +++L AC       LG  V E + +   E        SNIY     +D
Sbjct: 386 TAMLGACKMHKNFDLGAQVAEHLLAAEPENPAHYVILSNIYALAGRMD 433



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 104/365 (28%), Positives = 188/365 (51%), Gaps = 10/365 (2%)

Query: 106 PDNFTYSFVLSAASACCDRSIGVL--LHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSAR 163
           P +  Y+F+L A        + +L  +H H IVSGYG    +   L++L      +   R
Sbjct: 10  PHSPAYNFLLQAGP-----RLYLLHQVHAHIIVSGYGRSRSLLTKLLNLACAAGSISYTR 64

Query: 164 KVFDKMPEKDTVLWNSMISGLMKNCCFQ-DSIWVFGDMVRNGGTWLDSTSVAAVLPAVAE 222
           ++F  +P  D+ L+ S+I    K+  F   S++ +  MV +  +  + T   +V+ + A+
Sbjct: 65  QIFLAVPNPDSFLFTSLIKSTSKSHNFSIYSLYFYSRMVLSNVSPSNYT-FTSVIKSCAD 123

Query: 223 VQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAM 282
           +  L+ G  +    L  GF   VYV   LV+ Y KCG++  A  +F  I    +++ N+M
Sbjct: 124 LSALKHGRVVHGHVLVHGFGLDVYVQAALVALYGKCGDLINARKVFDKIRERSIVAWNSM 183

Query: 283 ISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGI 342
           ISGY  NG  + ++ LF ++  +    +S+T V ++      G   L   +H + + +G+
Sbjct: 184 ISGYEQNGFAKEAIGLFDRMKETGVEPDSATFVSVLSACAHLGAFSLGCWVHEYIVGNGL 243

Query: 343 VSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQE 402
             N  + T+L  +Y R   +  AR++FD   E+++ +W AMI+GY  NG   +A+ LF E
Sbjct: 244 DLNVVLGTSLINMYIRCGNVSKAREVFDSMKERNVVAWTAMISGYGTNGYGSQAVELFHE 303

Query: 403 MQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSR-NFESNIYVSTALIDMYAKCG 461
           M+ + + PN +T  ++LSACA  G ++ G+ +   ++   +    +  +  L+DM  + G
Sbjct: 304 MRRNGLFPNSITFVAVLSACAHAGLVNEGRRLFASIREEYHLVPGVEHNVCLVDMLGRAG 363

Query: 462 NIVEA 466
            + EA
Sbjct: 364 LLDEA 368


>gi|302764988|ref|XP_002965915.1| hypothetical protein SELMODRAFT_167728 [Selaginella moellendorffii]
 gi|300166729|gb|EFJ33335.1| hypothetical protein SELMODRAFT_167728 [Selaginella moellendorffii]
          Length = 912

 Score =  421 bits (1083), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 257/783 (32%), Positives = 401/783 (51%), Gaps = 87/783 (11%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEM-PKSSICF-----YTHLRKNTALTPDNFTYSF 113
           A A+F   P+ ++  +N +I G+S+N M P++   F        +  N  LT   +  S 
Sbjct: 159 ATAMFDRTPEHNVISWNALITGYSDNRMIPEAKGVFDRAPGRDKISWNAMLTA--YAQSG 216

Query: 114 VLSAASACCDR-------SIGVLLHGHAI--VSGYGSDLFVGAA---------LVDLYFK 155
            L +A    DR       S  +++   A+  + G+  ++F             ++ +Y  
Sbjct: 217 DLDSAKEVFDRTPQQDIVSCTLMIKACAVQEILGHAVEIFAAMPDRNAVSYSFMIQIYID 276

Query: 156 FSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAA 215
              +  A  +  +MP++D  LW SM+S   ++   +++  +F    R      D  S  A
Sbjct: 277 QGKIGEAENLSRRMPQQDPTLWTSMLSAYSRHGLVEEARRIFDRAARRD----DEVSWNA 332

Query: 216 VLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPD 275
           +L A A+   L L    +    ++  HD V   T L++   + G++E AE+L+  I   D
Sbjct: 333 LLSAYAQAGHLHLA---RSTFERMPRHD-VVAWTALIAVSGQNGQLEEAEVLYDLIPERD 388

Query: 276 LISCNAMISGYTCNGKTESSLRLF---------------------------RQLLASAER 308
           L++  A+I  Y  NGK   S R++                           R++L +   
Sbjct: 389 LVAWTALIQAYGVNGKLTESKRVYALMPERNRVSHTAMIIAYSQNGEVVQARKMLDTLPD 448

Query: 309 VNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKL 368
            + ST   +I  +   G++     +        +++ ++++ A    YS    ++ A+ +
Sbjct: 449 PDQSTRTSMIVAYAQNGYIKDAREMFDSIKNPDVIACNAMMEA----YSSAQMLDHAKAM 504

Query: 369 FDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAI 428
           FD   +K+L SWN M+A Y Q G  +EA S+F  +    V  + V + +           
Sbjct: 505 FDSIKQKTLVSWNTMVAAYAQAGNLDEAKSIFDSIPHKNVVSHNVMIVA----------- 553

Query: 429 SLGKWVH--ELVKSRNF-----ESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTW 481
               + H  +L ++R       E +    TA++ M A+ G + EA+ELF  M +++ V+W
Sbjct: 554 ----YAHNMDLAEARRIFYSMDEKDTVTWTAMVAMVAQHGRLAEAQELFAKMPYRNVVSW 609

Query: 482 NTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIH 541
           N++I+G    GHG+ A++    M + G +P  +TF+ +L ACSH GLV EG   F SM  
Sbjct: 610 NSLIAGMASCGHGMAAVRYLYVMRNEGAKPDHITFMGILIACSHVGLVEEGWTHFTSMQG 669

Query: 542 DHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLAR 601
           DHG  P  EHY  MVD+LGRAGQL  A E ++ +   P    WG+LLG+C  H D  L  
Sbjct: 670 DHGLIPWREHYCRMVDVLGRAGQLGAARELLETMPFIPDVGAWGSLLGSCKTHSDVKLGT 729

Query: 602 VASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTP 661
            A+E L + D ++ G +VLL+N+YS+      A  VR  +K R + K PG +LI V G  
Sbjct: 730 RAAESLLQFDDQSSGPYVLLANMYSSVGRVADALAVRNRMKARGVKKQPGVSLIRVDGVL 789

Query: 662 HVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLA 721
           H F +G+  HP+   I + L +L   M++AG+Q +T   LH + +EEKE+++  HSEKLA
Sbjct: 790 HRFVAGEASHPRHQEILSELSRLQELMKKAGYQPDTKAVLHSILDEEKEVLLSYHSEKLA 849

Query: 722 IAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCG 781
           IAF  IA EPGT IRI+KNLRVC DCHTATKF+SK+  R I+VRD  RFH+F+ G CSCG
Sbjct: 850 IAFASIACEPGTPIRIMKNLRVCSDCHTATKFLSKLLQREIIVRDGYRFHNFENGTCSCG 909

Query: 782 DYW 784
           DYW
Sbjct: 910 DYW 912



 Score =  105 bits (263), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 100/423 (23%), Positives = 194/423 (45%), Gaps = 47/423 (11%)

Query: 142 DLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMV 201
           ++F    L+  Y +   + SA+ +FD++P  + V WNS+I+G  ++    ++  +F  M 
Sbjct: 77  NVFSRCILMQAYSENGDLGSAKAIFDQIPSHNVVSWNSLIAGFSQHGFMSNADEIFARMP 136

Query: 202 RNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEV 261
           R    W  S+S  +++   A+  +L     +           +V     L++ YS    +
Sbjct: 137 R----W-SSSSWNSMITGYAQSGDLASATAM----FDRTPEHNVISWNALITGYSDNRMI 187

Query: 262 ERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVF 321
             A+ +F      D IS NAM++ Y  +G  +S+  +F +     + V+ + ++    V 
Sbjct: 188 PEAKGVFDRAPGRDKISWNAMLTAYAQSGDLDSAKEVFDR-TPQQDIVSCTLMIKACAVQ 246

Query: 322 YPFGH-------LHLTNCI-HSFCL-------KSGIVSNSS---------VLTALSTVYS 357
              GH       +   N + +SF +       K G   N S         + T++ + YS
Sbjct: 247 EILGHAVEIFAAMPDRNAVSYSFMIQIYIDQGKIGEAENLSRRMPQQDPTLWTSMLSAYS 306

Query: 358 RLNEMEAARKLFDESSEK-SLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVS 416
           R   +E AR++FD ++ +    SWNA+++ Y Q G    A S F+ M    V    V  +
Sbjct: 307 RHGLVEEARRIFDRAARRDDEVSWNALLSAYAQAGHLHLARSTFERMPRHDV----VAWT 362

Query: 417 SILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHK 476
           ++++   Q G +   + +++L+  R    ++   TALI  Y   G + E++ ++ LM  +
Sbjct: 363 ALIAVSGQNGQLEEAEVLYDLIPER----DLVAWTALIQAYGVNGKLTESKRVYALMPER 418

Query: 477 SEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIF 536
           + V+   MI  Y  +G  ++A     +ML +   P   T  S++ A +  G +++  E+F
Sbjct: 419 NRVSHTAMIIAYSQNGEVVQA----RKMLDTLPDPDQSTRTSMIVAYAQNGYIKDAREMF 474

Query: 537 QSM 539
            S+
Sbjct: 475 DSI 477



 Score =  102 bits (255), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 99/415 (23%), Positives = 181/415 (43%), Gaps = 59/415 (14%)

Query: 251 LVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVN 310
           ++  Y KC  ++ A+ +F ++  P++ S   ++  Y+ NG   S+  +F Q+ +     N
Sbjct: 53  IIQMYGKCSRIDDAQAVFNELPEPNVFSRCILMQAYSENGDLGSAKAIFDQIPSH----N 108

Query: 311 SSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFD 370
             +   LI  F   G +   + I +   +    S +S++T     Y++  ++ +A  +FD
Sbjct: 109 VVSWNSLIAGFSQHGFMSNADEIFARMPRWSSSSWNSMITG----YAQSGDLASATAMFD 164

Query: 371 ESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAP--NPVTVSSILSACAQLGAI 428
            + E ++ SWNA+I GY+ N +  EA  +F        AP  + ++ +++L+A AQ G +
Sbjct: 165 RTPEHNVISWNALITGYSDNRMIPEAKGVFDR------APGRDKISWNAMLTAYAQSGDL 218

Query: 429 SLGKWVHELVKSRNF---------------------------ESNIYVSTALIDMYAKCG 461
              K V +    ++                            + N    + +I +Y   G
Sbjct: 219 DSAKEVFDRTPQQDIVSCTLMIKACAVQEILGHAVEIFAAMPDRNAVSYSFMIQIYIDQG 278

Query: 462 NIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLY 521
            I EA  L   M  +    W +M+S Y  HG   EA ++F     +  R   V++ ++L 
Sbjct: 279 KIGEAENLSRRMPQQDPTLWTSMLSAYSRHGLVEEARRIFDR---AARRDDEVSWNALLS 335

Query: 522 ACSHAGLVREGDEIFQSMI-HDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPG 580
           A + AG +      F+ M  HD         +  ++ + G+ GQLE+A E +  L  E  
Sbjct: 336 AYAQAGHLHLARSTFERMPRHD------VVAWTALIAVSGQNGQLEEA-EVLYDLIPERD 388

Query: 581 PAVWGALLGACMIHKDTNLARVASEKLFELDPE-NVGYHVLLSNIYSAERDYLQA 634
              W AL+ A  +    N     S++++ L PE N   H  +   YS   + +QA
Sbjct: 389 LVAWTALIQAYGV----NGKLTESKRVYALMPERNRVSHTAMIIAYSQNGEVVQA 439



 Score = 44.3 bits (103), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 25/125 (20%), Positives = 58/125 (46%), Gaps = 4/125 (3%)

Query: 415 VSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMS 474
           +++ + +C     ++ G+ +H  +       N+++   +I MY KC  I +A+ +F+ + 
Sbjct: 15  LATAIRSCGIAKDLAQGRKIHNQIADGEHRGNLFLQNLIIQMYGKCSRIDDAQAVFNELP 74

Query: 475 HKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDE 534
             +  +   ++  Y  +G    A  +F ++    +    V++ S++   S  G +   DE
Sbjct: 75  EPNVFSRCILMQAYSENGDLGSAKAIFDQIPSHNV----VSWNSLIAGFSQHGFMSNADE 130

Query: 535 IFQSM 539
           IF  M
Sbjct: 131 IFARM 135


>gi|6714305|gb|AAF26001.1|AC013354_20 F15H18.4 [Arabidopsis thaliana]
          Length = 1702

 Score =  421 bits (1082), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 243/722 (33%), Positives = 382/722 (52%), Gaps = 5/722 (0%)

Query: 60   ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRK---NTALTPDNFTYSFVLS 116
            A  LF  +P+ +L  +N +IR FS+N   + S      + +   + A  PD  T   VL 
Sbjct: 596  ALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLP 655

Query: 117  AASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVL 176
              +   +  +G  +HG A+      +L +  AL+D+Y K   + +A+ +F     K+ V 
Sbjct: 656  VCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVS 715

Query: 177  WNSMISGLMKNCCFQDSIWVFGDMVRNG-GTWLDSTSVAAVLPAVAEVQELRLGMEIQCL 235
            WN+M+ G         +  V   M+  G     D  ++   +P       L    E+ C 
Sbjct: 716  WNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCY 775

Query: 236  GLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESS 295
             LK  F  +  V    V+ Y+KCG +  A+ +F  I    + S NA+I G+  +     S
Sbjct: 776  SLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLS 835

Query: 296  LRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTV 355
            L    Q+  S    +S T+  L+        L L   +H F +++ +  +  V  ++ ++
Sbjct: 836  LDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSL 895

Query: 356  YSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTV 415
            Y    E+   + LFD   +KSL SWN +I GY QNG  + A+ +F++M    +    +++
Sbjct: 896  YIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISM 955

Query: 416  SSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSH 475
              +  AC+ L ++ LG+  H        E + +++ +LIDMYAK G+I ++ ++F+ +  
Sbjct: 956  MPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKE 1015

Query: 476  KSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEI 535
            KS  +WN MI GYG+HG   EA++LF EM  +G  P  +TFL VL AC+H+GL+ EG   
Sbjct: 1016 KSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRY 1075

Query: 536  FQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFI-KGLAVEPGPAVWGALLGACMIH 594
               M    G KP  +HYAC++D+LGRAGQL+KAL  + + ++ E    +W +LL +C IH
Sbjct: 1076 LDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIH 1135

Query: 595  KDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTL 654
            ++  +    + KLFEL+PE    +VLLSN+Y+    +     VRQ + +  L K  GC+ 
Sbjct: 1136 QNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSW 1195

Query: 655  IEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMK 714
            IE+      F  G++       I ++   L  K+ + G++ +T++  HD+ EEEK   ++
Sbjct: 1196 IELNRKVFSFVVGERFLDGFEEIKSLWSILEMKISKMGYRPDTMSVQHDLSEEEKIEQLR 1255

Query: 715  VHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFK 774
             HSEKLA+ +GLI T  GT IR+ KNLR+C+DCH A K ISKV  R IVVRD  RFHHFK
Sbjct: 1256 GHSEKLALTYGLIKTSEGTTIRVYKNLRICVDCHNAAKLISKVMEREIVVRDNKRFHHFK 1315

Query: 775  GG 776
             G
Sbjct: 1316 NG 1317



 Score =  281 bits (719), Expect = 9e-73,   Method: Compositional matrix adjust.
 Identities = 175/559 (31%), Positives = 291/559 (52%), Gaps = 19/559 (3%)

Query: 60   ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
            +R +F ++   +LF +N +I  +S NE+    +  +  +   T L PD+FTY  V+ A +
Sbjct: 494  SRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACA 553

Query: 120  ACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNS 179
               D  IG+ +HG  + +G   D+FVG ALV  Y    +V  A ++FD MPE++ V WNS
Sbjct: 554  GMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNS 613

Query: 180  MISGLMKNCCFQDSIWVFGDMVR---NGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLG 236
            MI     N   ++S  + G+M+    +G    D  ++  VLP  A  +E+ LG  +    
Sbjct: 614  MIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWA 673

Query: 237  LKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSL 296
            +KL     + +   L+  YSKCG +  A+++F+     +++S N M+ G++  G T  + 
Sbjct: 674  VKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTF 733

Query: 297  RLFRQLLASAERVNSS--TIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALST 354
             + RQ+LA  E V +   TI+  +PV +    L     +H + LK   V N  V  A   
Sbjct: 734  DVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVA 793

Query: 355  VYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVT 414
             Y++   +  A+++F     K++ SWNA+I G+ Q+     ++    +M+ S + P+  T
Sbjct: 794  SYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFT 853

Query: 415  VSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMS 474
            V S+LSAC++L ++ LGK VH  +     E +++V  +++ +Y  CG +   + LFD M 
Sbjct: 854  VCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAME 913

Query: 475  HKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDE 534
             KS V+WNT+I+GY  +G    AL +F +M+  GI+  G++ + V  ACS    +R G E
Sbjct: 914  DKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGRE 973

Query: 535  IFQSMIHDHGFKPLAEH---YAC-MVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGA 590
                  H +  K L E     AC ++D+  + G + ++ +   GL  E   A W A++  
Sbjct: 974  -----AHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLK-EKSTASWNAMIMG 1027

Query: 591  CMIHKDTNLARVASEKLFE 609
              IH    LA+ A  KLFE
Sbjct: 1028 YGIH---GLAKEAI-KLFE 1042



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 111/422 (26%), Positives = 199/422 (47%), Gaps = 16/422 (3%)

Query: 133 HAIVSG---YGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCC 189
           H +VSG     +D  +   ++ +Y        +R VFD +  K+   WN++IS   +N  
Sbjct: 462 HQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNEL 521

Query: 190 FQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLT 249
           + + +  F +M+       D  +   V+ A A + ++ +G+ +  L +K G  + V+V  
Sbjct: 522 YDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGN 581

Query: 250 GLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLAS---- 305
            LVSFY   G V  A  LF  +   +L+S N+MI  ++ NG +E S  L  +++      
Sbjct: 582 ALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDG 641

Query: 306 AERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAA 365
           A   + +T+V ++PV      + L   +H + +K  +     +  AL  +YS+   +  A
Sbjct: 642 AFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNA 701

Query: 366 RKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQA--SKVAPNPVTVSSILSACA 423
           + +F  ++ K++ SWN M+ G++  G T     + ++M A    V  + VT+ + +  C 
Sbjct: 702 QMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCF 761

Query: 424 QLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNT 483
               +   K +H     + F  N  V+ A +  YAKCG++  A+ +F  +  K+  +WN 
Sbjct: 762 HESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNA 821

Query: 484 MISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDH 543
           +I G+        +L    +M  SG+ P   T  S+L ACS    +R G E+       H
Sbjct: 822 LIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEV-------H 874

Query: 544 GF 545
           GF
Sbjct: 875 GF 876


>gi|414590987|tpg|DAA41558.1| TPA: hypothetical protein ZEAMMB73_311644 [Zea mays]
          Length = 575

 Score =  421 bits (1082), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 219/573 (38%), Positives = 339/573 (59%), Gaps = 41/573 (7%)

Query: 214 AAVLPAVAEVQELRLGM-EIQCLGLKLGFHD-HVYVLTGLVSFYSKCGEVERAELLFRDI 271
           AA+  +V  +++L LG   +    LK GF    ++V T LV  Y+K G  + A   F + 
Sbjct: 42  AALSASVPAMRDLGLGAASLHARALKSGFAAADLFVRTALVEAYAKAGRADLARAAFDEA 101

Query: 272 VRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTN 331
            R D+  CN M++ Y   G+   + R+F   +   + V+ +T+                 
Sbjct: 102 PRRDVFLCNVMLAAYVTRGEVAEARRVF-DGMRERDMVSWNTM----------------- 143

Query: 332 CIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNG 391
            IH + +                      E++ AR++F+   ++   SW++M++ YT+  
Sbjct: 144 -IHGYAVN--------------------GEVDLAREVFNGMDDRDAFSWSSMMSAYTKGR 182

Query: 392 LTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVST 451
            +++A+ L++EM+A+ V P+  T+ S+LSAC+ +GA+++G  VH+ V+S   E ++ + T
Sbjct: 183 RSKDALELWREMRAACVNPDCTTMVSVLSACSDMGALAVGAEVHQFVESNGVELDVKLGT 242

Query: 452 ALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRP 511
           ALIDMYAKCG+I  +  +F  M  K  +TW++MI G   HG G +AL LFS ML  G++P
Sbjct: 243 ALIDMYAKCGDIENSVRVFHSMPVKDVLTWSSMIIGLANHGFGHDALSLFSRMLSEGLQP 302

Query: 512 SGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEF 571
           + VTF+ VL +C+H GLV +G + F SM   HG  P  +HY CMVD+LGR+G +E+A + 
Sbjct: 303 NEVTFIGVLISCTHLGLVSDGKKYFSSMSVVHGVTPKVQHYGCMVDLLGRSGHIEEAKQL 362

Query: 572 IKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDY 631
           I+ +  EP   +W ALLGAC I+K+  +A  A  KL  LDP   G++VLLSNIY+    +
Sbjct: 363 IRDMPFEPDAVIWRALLGACRIYKNVEVAEEAMAKLRVLDPHADGHYVLLSNIYAQANSW 422

Query: 632 LQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREA 691
              A +R+ +++ ++ + PG + IE   T H F SGD+ HP+S  IY ML ++  ++R+A
Sbjct: 423 EGVAEMRRTLRRERIQRIPGRSSIEWQNTIHEFISGDRSHPRSKEIYKMLGEMMDRLRQA 482

Query: 692 GFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTAT 751
           G++  T   L D++E+ KE  +  HSEKLA+AFGL+ T  G+ +RI KNLR C DCH+A 
Sbjct: 483 GYKPMTGLVLQDIDEQSKERALAEHSEKLAVAFGLLTTPAGSTLRITKNLRACEDCHSAI 542

Query: 752 KFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           K I+ +  R +++RD NRFHHF  G CSC DYW
Sbjct: 543 KLIALLYERKLIIRDRNRFHHFSEGRCSCKDYW 575



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 112/503 (22%), Positives = 206/503 (40%), Gaps = 98/503 (19%)

Query: 29  HAQIIIHGFQN-DLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNEM 87
           HA+ +  GF   DL   T L    +       ARA F   P+ D+FL NV++  +     
Sbjct: 62  HARALKSGFAAADLFVRTALVEAYAKAGRADLARAAFDEAPRRDVFLCNVMLAAYVTRGE 121

Query: 88  PKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGA 147
              +   +  +R+   +                    S   ++HG+A+            
Sbjct: 122 VAEARRVFDGMRERDMV--------------------SWNTMIHGYAV-----------N 150

Query: 148 ALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTW 207
             VDL         AR+VF+ M ++D   W+SM+S   K    +D++ ++ +M R     
Sbjct: 151 GEVDL---------AREVFNGMDDRDAFSWSSMMSAYTKGRRSKDALELWREM-RAACVN 200

Query: 208 LDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELL 267
            D T++ +VL A +++  L +G E+       G    V + T L+  Y+KCG++E +  +
Sbjct: 201 PDCTTMVSVLSACSDMGALAVGAEVHQFVESNGVELDVKLGTALIDMYAKCGDIENSVRV 260

Query: 268 FRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHL 327
           F  +   D+++ ++MI G   +G    +L LF ++L+   + N  T +G+          
Sbjct: 261 FHSMPVKDVLTWSSMIIGLANHGFGHDALSLFSRMLSEGLQPNEVTFIGV---------- 310

Query: 328 HLTNCIHSFCLKSGIVSN-SSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAG 386
            L +C H      G+VS+     +++S V+    +++                +  M+  
Sbjct: 311 -LISCTH-----LGLVSDGKKYFSSMSVVHGVTPKVQ---------------HYGCMVDL 349

Query: 387 YTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFE-- 444
             ++G  EEA  L ++M      P+ V   ++L AC     + + +    + K R  +  
Sbjct: 350 LGRSGHIEEAKQLIRDM---PFEPDAVIWRALLGACRIYKNVEVAE--EAMAKLRVLDPH 404

Query: 445 --------SNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTW-NTM---ISGYGLHG 492
                   SNIY      +  A+    +  RE    +  +S + W NT+   ISG   H 
Sbjct: 405 ADGHYVLLSNIYAQANSWEGVAEMRRTLR-RERIQRIPGRSSIEWQNTIHEFISGDRSHP 463

Query: 493 HGLEALQLFSEML----HSGIRP 511
              E  ++  EM+     +G +P
Sbjct: 464 RSKEIYKMLGEMMDRLRQAGYKP 486


>gi|449525261|ref|XP_004169636.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g44230-like [Cucumis sativus]
          Length = 650

 Score =  421 bits (1082), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 222/590 (37%), Positives = 348/590 (58%), Gaps = 47/590 (7%)

Query: 237 LKLGFHDHVYVLTGLVSFYSKCGEVERAE---LLFRDIVRPDLISCNAMISGYTCNGKTE 293
           ++ G     YVLT L+   +K  +V       L+F  +  P+     AMI GY   G   
Sbjct: 66  IRNGLSQCSYVLTKLIRMLTKV-DVPMGSYPLLVFGQVNYPNPFLWTAMIRGYALQGLLS 124

Query: 294 SSLRLFRQL------------------------LASAERVNSSTIVGLIPVFYPFGHLHL 329
            S   + ++                        +   ++V++ TI  LI  F     L++
Sbjct: 125 ESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLGKQVHAQTI--LIGGFA--SDLYV 180

Query: 330 TNCIHSFCLKSGIV----------SNSSVL--TALSTVYSRLNEMEAARKLFDESSEKSL 377
            N +    +K G +          S   V+  T L   Y++  +ME+A  LFD+   K +
Sbjct: 181 GNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGDMESASGLFDDLPSKDM 240

Query: 378 ASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHEL 437
            +W AM+ GY QNG  +EA+  FQ+MQ   +  + VT++ ++SACAQLGA+    W+ ++
Sbjct: 241 VAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISACAQLGAVKHANWIRDI 300

Query: 438 VKSRNF--ESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGL 495
            +   F    N+ V +ALIDMY+KCG+  EA ++F++M  ++  ++++MI GY +HG   
Sbjct: 301 AERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKERNVFSYSSMILGYAMHGRAH 360

Query: 496 EALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACM 555
            ALQLF +ML + IRP+ VTF+ +L ACSHAGLV +G ++F  M    G  P  +HYACM
Sbjct: 361 SALQLFHDMLKTEIRPNKVTFIGILSACSHAGLVEQGRQLFAKMEKFFGVAPSPDHYACM 420

Query: 556 VDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENV 615
           VD+LGRAG LE+AL+ +K + +EP   VWGALLGAC IH + ++A++A+ +LF+L+P  +
Sbjct: 421 VDLLGRAGCLEEALDLVKTMPMEPNGGVWGALLGACRIHGNPDIAQIAANELFKLEPNGI 480

Query: 616 GYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIE-VGGTPHVFTSGDQLHPQS 674
           G ++LLSNIY++   + + + +R+V++++   K PGC+  E   G  H F +GD  HP+S
Sbjct: 481 GNYILLSNIYASAGRWEEVSKLRKVIREKGFKKNPGCSWFEGKNGEIHDFFAGDTTHPRS 540

Query: 675 TAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTE 734
           + I   L++L  ++R  G++    +A +D+ ++EKE ++  HSEKLA+A+GL+ TE G  
Sbjct: 541 SEIRQALKQLIERLRSHGYKPNLGSAPYDLTDDEKERILMSHSEKLALAYGLLCTEAGDT 600

Query: 735 IRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           I+I+KN+R+C DCH      S++TGR I+VRD  RFHHF  G CSCG++W
Sbjct: 601 IKIMKNIRICEDCHNVMCAASEITGREIIVRDNMRFHHFHNGTCSCGNFW 650



 Score =  155 bits (391), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 132/500 (26%), Positives = 224/500 (44%), Gaps = 79/500 (15%)

Query: 12  FLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLS--DFKATCYARALFFSIPK 69
            +S+L      SQ+ Q HA II +G       +TKL   L+  D     Y   +F  +  
Sbjct: 45  LMSILHDCTLFSQIKQVHAHIIRNGLSQCSYVLTKLIRMLTKVDVPMGSYPLLVFGQVNY 104

Query: 70  PDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVL 129
           P+ FL+  +IRG++   +   S  FYT +R++  + P +FT+S +  A  A  +  +G  
Sbjct: 105 PNPFLWTAMIRGYALQGLLSESTNFYTRMRRD-GVGPVSFTFSALFKACGAALNMDLGKQ 163

Query: 130 LHGHAI-VSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKM------------------- 169
           +H   I + G+ SDL+VG +++DLY K  ++  ARKVFD+M                   
Sbjct: 164 VHAQTILIGGFASDLYVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYG 223

Query: 170 ------------PEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVL 217
                       P KD V W +M++G  +N   ++++  F  M ++ G   D  ++A V+
Sbjct: 224 DMESASGLFDDLPSKDMVAWTAMVTGYAQNGRPKEALEYFQKM-QDVGMETDEVTLAGVI 282

Query: 218 PAVAEVQELRLGMEIQCLGLKLGF--HDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPD 275
            A A++  ++    I+ +  + GF    +V V + L+  YSKCG  + A  +F  +   +
Sbjct: 283 SACAQLGAVKHANWIRDIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKERN 342

Query: 276 LISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHS 335
           + S ++MI GY  +G+  S+L+LF  +L +  R N  T +G++                S
Sbjct: 343 VFSYSSMILGYAMHGRAHSALQLFHDMLKTEIRPNKVTFIGIL----------------S 386

Query: 336 FCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEE 395
            C  +G+V     L A         +ME   K F  +   S   +  M+    + G  EE
Sbjct: 387 ACSHAGLVEQGRQLFA---------KME---KFFGVAP--SPDHYACMVDLLGRAGCLEE 432

Query: 396 AISLFQEMQASKVAPNPVTVSSILSAC--------AQLGAISLGKWVHELVKSRNFESNI 447
           A+ L + M    + PN     ++L AC        AQ+ A  L K     + +    SNI
Sbjct: 433 ALDLVKTM---PMEPNGGVWGALLGACRIHGNPDIAQIAANELFKLEPNGIGNYILLSNI 489

Query: 448 YVSTALIDMYAKCGNIVEAR 467
           Y S    +  +K   ++  +
Sbjct: 490 YASAGRWEEVSKLRKVIREK 509



 Score =  106 bits (264), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 73/272 (26%), Positives = 124/272 (45%), Gaps = 37/272 (13%)

Query: 333 IHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKL--FDESSEKSLASWNAMIAGYTQN 390
           +H+  +++G+   S VLT L  + ++++    +  L  F + +  +   W AMI GY   
Sbjct: 61  VHAHIIRNGLSQCSYVLTKLIRMLTKVDVPMGSYPLLVFGQVNYPNPFLWTAMIRGYALQ 120

Query: 391 GLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVH-ELVKSRNFESNIYV 449
           GL  E+ + +  M+   V P   T S++  AC     + LGK VH + +    F S++YV
Sbjct: 121 GLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLGKQVHAQTILIGGFASDLYV 180

Query: 450 STALIDMYAKCGNIVEARELFDLMSH-------------------------------KSE 478
             ++ID+Y KCG +  AR++FD MS                                K  
Sbjct: 181 GNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGDMESASGLFDDLPSKDM 240

Query: 479 VTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQS 538
           V W  M++GY  +G   EAL+ F +M   G+    VT   V+ AC+  G V+  + I + 
Sbjct: 241 VAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISACAQLGAVKHANWI-RD 299

Query: 539 MIHDHGFKPLAEHY--ACMVDILGRAGQLEKA 568
           +    GF P       + ++D+  + G  ++A
Sbjct: 300 IAERSGFGPSGNVVVGSALIDMYSKCGSPDEA 331


>gi|225464414|ref|XP_002269452.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g04780-like [Vitis vinifera]
          Length = 594

 Score =  421 bits (1082), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 231/556 (41%), Positives = 331/556 (59%)

Query: 229 GMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTC 288
           GM      +++G          L++ YSKCG VE A  LF ++    L+S N M+  +T 
Sbjct: 39  GMACHAQIIRVGLRADTITSNMLMNMYSKCGLVESARKLFDEMPVRSLVSWNTMVGSHTQ 98

Query: 289 NGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSV 348
           NG  E +L LF Q+       +  T+  ++        +     +H F LK+ + SN  V
Sbjct: 99  NGDCEKALVLFMQMQKEGTSCSEFTVSSVVCACAAKCCVFECKQLHGFALKTALDSNVFV 158

Query: 349 LTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKV 408
            TAL  VY++   ++ A  +F+   E+S  +W++M+AGY QN L EEA+ LF   QA  +
Sbjct: 159 GTALLDVYAKCGLVKDANLVFECMPERSDVTWSSMVAGYVQNELYEEALVLFHRAQAMGL 218

Query: 409 APNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARE 468
             N  T+SS LSACA   A+  GK V  +       SNI+V ++LIDMYAKCG I EA  
Sbjct: 219 EHNQFTISSALSACAARAALIEGKQVQAVSCKTGIGSNIFVISSLIDMYAKCGIIEEAYT 278

Query: 469 LFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGL 528
           +F  +  K+ V WN ++SG+  H   LEA+  F +M   GI P+ +T++SVL ACSH GL
Sbjct: 279 VFSSVEEKNVVLWNAILSGFSRHVRSLEAMIYFEKMQQMGICPNDITYISVLSACSHLGL 338

Query: 529 VREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALL 588
           V +G + F  MI  H   P   HY+CMVDILGRAG L +A +FI  +  +   ++WG+LL
Sbjct: 339 VEKGRKYFDLMIRVHNVSPNVLHYSCMVDILGRAGLLHEAKDFIDRMPFDATASMWGSLL 398

Query: 589 GACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAK 648
            +C I+++  LA VA++ LFE++P N G HVLLSNIY+A   + + A  R ++K+ K  K
Sbjct: 399 ASCRIYRNLELAEVAAKHLFEIEPHNAGNHVLLSNIYAANDRWEEVARARNLLKESKAKK 458

Query: 649 APGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEE 708
             G + IE+    H F  G++ HP+   IY  LE L G+M++ G++ +T   LHDVEE  
Sbjct: 459 ERGKSWIEIKHKVHSFMVGERNHPRIVEIYLKLEDLVGEMKKIGYKAKTEHDLHDVEESR 518

Query: 709 KELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDAN 768
           K+ +++ HSEKLA+ FG++    G  IRI+KNLR+C DCH+  K  S +T R I+VRD N
Sbjct: 519 KQELLRHHSEKLALTFGIMVLPHGAPIRIMKNLRICGDCHSFMKLASSITEREIIVRDTN 578

Query: 769 RFHHFKGGVCSCGDYW 784
           RFHHFK G CSCG++W
Sbjct: 579 RFHHFKNGYCSCGEFW 594



 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 100/362 (27%), Positives = 188/362 (51%), Gaps = 3/362 (0%)

Query: 127 GVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMK 186
           G+  H   I  G  +D      L+++Y K   V+SARK+FD+MP +  V WN+M+    +
Sbjct: 39  GMACHAQIIRVGLRADTITSNMLMNMYSKCGLVESARKLFDEMPVRSLVSWNTMVGSHTQ 98

Query: 187 NCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVY 246
           N   + ++ +F  M +  GT     +V++V+ A A    +    ++    LK     +V+
Sbjct: 99  NGDCEKALVLFMQMQKE-GTSCSEFTVSSVVCACAAKCCVFECKQLHGFALKTALDSNVF 157

Query: 247 VLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASA 306
           V T L+  Y+KCG V+ A L+F  +     ++ ++M++GY  N   E +L LF +  A  
Sbjct: 158 VGTALLDVYAKCGLVKDANLVFECMPERSDVTWSSMVAGYVQNELYEEALVLFHRAQAMG 217

Query: 307 ERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAAR 366
              N  TI   +        L     + +   K+GI SN  V+++L  +Y++   +E A 
Sbjct: 218 LEHNQFTISSALSACAARAALIEGKQVQAVSCKTGIGSNIFVISSLIDMYAKCGIIEEAY 277

Query: 367 KLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLG 426
            +F    EK++  WNA+++G++++  + EA+  F++MQ   + PN +T  S+LSAC+ LG
Sbjct: 278 TVFSSVEEKNVVLWNAILSGFSRHVRSLEAMIYFEKMQQMGICPNDITYISVLSACSHLG 337

Query: 427 AISLG-KWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVT-WNTM 484
            +  G K+   +++  N   N+   + ++D+  + G + EA++  D M   +  + W ++
Sbjct: 338 LVEKGRKYFDLMIRVHNVSPNVLHYSCMVDILGRAGLLHEAKDFIDRMPFDATASMWGSL 397

Query: 485 IS 486
           ++
Sbjct: 398 LA 399



 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 105/420 (25%), Positives = 197/420 (46%), Gaps = 17/420 (4%)

Query: 29  HAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNEMP 88
           HAQII  G + D  T   L +  S       AR LF  +P   L  +N ++   + N   
Sbjct: 43  HAQIIRVGLRADTITSNMLMNMYSKCGLVESARKLFDEMPVRSLVSWNTMVGSHTQNGDC 102

Query: 89  KSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAA 148
           + ++  +  ++K    +   FT S V+ A +A C       LHG A+ +   S++FVG A
Sbjct: 103 EKALVLFMQMQKE-GTSCSEFTVSSVVCACAAKCCVFECKQLHGFALKTALDSNVFVGTA 161

Query: 149 LVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWL 208
           L+D+Y K   VK A  VF+ MPE+  V W+SM++G ++N  +++++ +F    +  G   
Sbjct: 162 LLDVYAKCGLVKDANLVFECMPERSDVTWSSMVAGYVQNELYEEALVLF-HRAQAMGLEH 220

Query: 209 DSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLF 268
           +  ++++ L A A    L  G ++Q +  K G   +++V++ L+  Y+KCG +E A  +F
Sbjct: 221 NQFTISSALSACAARAALIEGKQVQAVSCKTGIGSNIFVISSLIDMYAKCGIIEEAYTVF 280

Query: 269 RDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLH 328
             +   +++  NA++SG++ + ++  ++  F ++       N  T + ++      G + 
Sbjct: 281 SSVEEKNVVLWNAILSGFSRHVRSLEAMIYFEKMQQMGICPNDITYISVLSACSHLGLVE 340

Query: 329 LTNCIHSFCLKSGIVS-NSSVLTALSTVYSRLNEMEAARKLFDESSEKSLAS-WNAMIAG 386
                    ++   VS N    + +  +  R   +  A+   D     + AS W +++A 
Sbjct: 341 KGRKYFDLMIRVHNVSPNVLHYSCMVDILGRAGLLHEAKDFIDRMPFDATASMWGSLLAS 400

Query: 387 ---YTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNF 443
              Y    L E A     E++    A N V +S+I +A          +W  E+ ++RN 
Sbjct: 401 CRIYRNLELAEVAAKHLFEIEPHN-AGNHVLLSNIYAAN--------DRW-EEVARARNL 450



 Score = 62.8 bits (151), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 42/128 (32%), Positives = 64/128 (50%), Gaps = 7/128 (5%)

Query: 418 ILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKS 477
           +L + A+  A   G   H  +      ++   S  L++MY+KCG +  AR+LFD M  +S
Sbjct: 26  LLQSSARNRAAIEGMACHAQIIRVGLRADTITSNMLMNMYSKCGLVESARKLFDEMPVRS 85

Query: 478 EVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQ 537
            V+WNTM+  +  +G   +AL LF +M   G   S  T  SV+ AC+    V E  ++  
Sbjct: 86  LVSWNTMVGSHTQNGDCEKALVLFMQMQKEGTSCSEFTVSSVVCACAAKCCVFECKQL-- 143

Query: 538 SMIHDHGF 545
                HGF
Sbjct: 144 -----HGF 146


>gi|347954528|gb|AEP33764.1| organelle transcript processing 82, partial [Iberis amara]
          Length = 666

 Score =  421 bits (1082), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 240/660 (36%), Positives = 371/660 (56%), Gaps = 37/660 (5%)

Query: 129 LLHGHAIVSGYGSDLFVGAALVD---LYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLM 185
           ++H   I +G  +  +  + L++   L   F  +  A  VF+ + E + ++WN+M  G  
Sbjct: 8   MIHAQMIKTGLHNTNYALSKLIEFCILSPHFDGLPYAISVFETIQEPNLLIWNTMFRGHA 67

Query: 186 KNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHV 245
            +     ++ ++  M+ + G   +S +   +L + A+ +  + G +I    LKLG    +
Sbjct: 68  LSSDPVSALKLYVCMI-SLGLLPNSYTFPFLLKSCAKSKAFKEGQQIHGHVLKLGCDLDL 126

Query: 246 YVLTGLVSFYSKCGEVERAELLF-----RDIVR--------------------------P 274
           YV T L+S Y + G +E A  +F     RD+V                            
Sbjct: 127 YVHTSLISMYVQNGRLEDAHKVFDESPHRDVVSYTALIKGYASRGYIENAQKMFDEIPVK 186

Query: 275 DLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIH 334
           D++S NAMISGY   G  + +L LF+ ++ +  R + ST+V ++      G + L   +H
Sbjct: 187 DVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVH 246

Query: 335 SFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTE 394
           S+    G  SN  ++ AL  +YS+  E+E A  LF+    K + SWN +I GYT   L +
Sbjct: 247 SWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFEGLPYKDVISWNTLIGGYTHMNLYK 306

Query: 395 EAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSR--NFESNIYVSTA 452
           EA+ LFQEM  S   PN VT+ SIL ACA LGAI +G+W+H  +  R     +   + T+
Sbjct: 307 EALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVANASSLRTS 366

Query: 453 LIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPS 512
           LIDMYAKCG+I  A ++F+ + HKS  +WN MI G+ +HG    +  +FS M  +GI P 
Sbjct: 367 LIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDIFSRMRKNGIEPD 426

Query: 513 GVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFI 572
            +TF+ +L ACSH+G++  G  IF+SM  D+   P  EHY CM+D+LG +G  ++A E I
Sbjct: 427 DITFVGLLSACSHSGMLDLGRHIFRSMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMI 486

Query: 573 KGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYL 632
             + +EP   +W +LL AC +H +  L    ++ L +++PEN G +VLLSNIY+    + 
Sbjct: 487 NTMEMEPDGVIWCSLLKACKMHGNVELGESFAQNLIKIEPENPGSYVLLSNIYATAGRWN 546

Query: 633 QAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAG 692
           + A  R ++  + + K PGC+ IE+    H F  GD+ HP++  IY MLE++   + EAG
Sbjct: 547 EVANTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEEAG 606

Query: 693 FQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATK 752
           F  +T   L ++EEE KE  ++ HSEKLAIAFGLI+T+PGT++ I+KNLRVC +CH A K
Sbjct: 607 FVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEAYK 666



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 157/598 (26%), Positives = 278/598 (46%), Gaps = 80/598 (13%)

Query: 25  LTQTHAQIIIHGFQNDLSTVTKLAHRL---SDFKATCYARALFFSIPKPDLFLFNVIIRG 81
           L   HAQ+I  G  N    ++KL         F    YA ++F +I +P+L ++N + RG
Sbjct: 6   LRMIHAQMIKTGLHNTNYALSKLIEFCILSPHFDGLPYAISVFETIQEPNLLIWNTMFRG 65

Query: 82  FSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGS 141
            + +  P S++  Y  +  +  L P+++T+ F+L + +       G  +HGH +  G   
Sbjct: 66  HALSSDPVSALKLYVCM-ISLGLLPNSYTFPFLLKSCAKSKAFKEGQQIHGHVLKLGCDL 124

Query: 142 DLFVGAALVDLYFKFSWVKSARKVFDK-------------------------------MP 170
           DL+V  +L+ +Y +   ++ A KVFD+                               +P
Sbjct: 125 DLYVHTSLISMYVQNGRLEDAHKVFDESPHRDVVSYTALIKGYASRGYIENAQKMFDEIP 184

Query: 171 EKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGM 230
            KD V WN+MISG  +   +++++ +F DM++      D +++  V+ A A+   + LG 
Sbjct: 185 VKDVVSWNAMISGYAETGNYKEALELFKDMMKT-NVRPDESTMVTVVSACAQSGSIELGR 243

Query: 231 EIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNG 290
           ++       GF  ++ ++  L+  YSKCGE+E A  LF  +   D+IS N +I GYT   
Sbjct: 244 QVHSWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFEGLPYKDVISWNTLIGGYTHMN 303

Query: 291 KTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLK--SGIVSNSSV 348
             + +L LF+++L S E  N  T++ ++P     G + +   IH +  K   G+ + SS+
Sbjct: 304 LYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVANASSL 363

Query: 349 LTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKV 408
            T+L  +Y++  ++EAA ++F+    KSL+SWNAMI G+  +G  + +  +F  M+ + +
Sbjct: 364 RTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDIFSRMRKNGI 423

Query: 409 APNPVTVSSILSACAQLGAISLGKWV-HELVKSRNFESNIYVSTALIDMYAKCGNIVEAR 467
            P+ +T   +LSAC+  G + LG+ +   + +       +     +ID+    G   EA 
Sbjct: 424 EPDDITFVGLLSACSHSGMLDLGRHIFRSMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAE 483

Query: 468 ELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAG 527
           E+ + M                                   + P GV + S+L AC   G
Sbjct: 484 EMINTME----------------------------------MEPDGVIWCSLLKACKMHG 509

Query: 528 LVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLE-----KALEFIKGLAVEPG 580
            V  G+   Q++I      P +  Y  + +I   AG+       +AL   KG+   PG
Sbjct: 510 NVELGESFAQNLIKIEPENPGS--YVLLSNIYATAGRWNEVANTRALLNDKGMKKVPG 565


>gi|302790389|ref|XP_002976962.1| hypothetical protein SELMODRAFT_106096 [Selaginella moellendorffii]
 gi|300155440|gb|EFJ22072.1| hypothetical protein SELMODRAFT_106096 [Selaginella moellendorffii]
          Length = 1108

 Score =  421 bits (1081), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 257/743 (34%), Positives = 385/743 (51%), Gaps = 31/743 (4%)

Query: 59   YARALFFSIP---------KPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNF 109
            YA+  FFS           K D+  +N ++ G S +      +    H      + P+  
Sbjct: 380  YAKCGFFSAAWAVFRRIRWKCDVISWNTML-GASEDRKSFGKVVNTFHHMLLAGIDPNKV 438

Query: 110  TYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLF---VGAALVDLYFKFSWVKSARKVF 166
            ++  +L+A S       G  +H  +++     D     V   LV +Y K   +  A  VF
Sbjct: 439  SFIAILNACSNSEALDFGRKIH--SLILTRRRDYVESSVATMLVSMYGKCGSISEAELVF 496

Query: 167  DKMP--EKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAV---A 221
             +MP   +  V WN M+    +N   +++     +M++ GG   D+ S  +VL +     
Sbjct: 497  KEMPLPSRSLVTWNVMLGAYAQNDRSKEAFGALMEMLQ-GGVLPDALSFTSVLSSCYCSQ 555

Query: 222  EVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNA 281
            E Q LR+     C+ L+ G+     + T L+S + +C E+E+A  +F ++   D++S  A
Sbjct: 556  EAQVLRM-----CI-LESGYRSAC-LETALISMHGRCRELEQARSVFNEMDHGDVVSWTA 608

Query: 282  MISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSG 341
            M+S    N   +    LFR++       +  T+   +        L L   IH+   + G
Sbjct: 609  MVSATAENRDFKEVHNLFRRMQLEGVIPDKFTLATTLDTCLASTTLGLGKVIHACVTEIG 668

Query: 342  IVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQ 401
            + ++ +V  AL  +YS   +   A   F+    + L SWN M A Y Q GL +EA+ LF+
Sbjct: 669  LEADIAVENALLNMYSNCGDWREALSFFETMKARDLVSWNIMSAAYAQAGLAKEAVLLFR 728

Query: 402  EMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCG 461
            +MQ   V P+ +T S+ L+       +S GK  H L      +S++ V+T L+ +YAKCG
Sbjct: 729  QMQLEGVKPDKLTFSTTLNVSGGSALVSDGKLFHALAAESGLDSDVSVATGLVKLYAKCG 788

Query: 462  NIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLY 521
             + EA  LF      + V  N +I     HG   EA+++F +M   G+RP   T +S++ 
Sbjct: 789  KLDEAMSLFRGACDWTVVLLNAIIGALAQHGFSEEAVKMFWKMQQEGVRPDVATLVSIIS 848

Query: 522  ACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGP 581
            AC HAG+V EG   F +M    G  P  EHYAC VD+LGRAGQLE A + I+ +  E   
Sbjct: 849  ACGHAGMVEEGCSSFLTMKEYFGISPTLEHYACFVDLLGRAGQLEHAEQIIRKMPFEDNT 908

Query: 582  AVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVV 641
             VW +LLG C +  D  L    ++++ ELDP N   HV+LSNIY A   +  A   R+ +
Sbjct: 909  LVWTSLLGTCKLQGDAELGERCAQRILELDPHNSAAHVVLSNIYCATGKWKDADVDRKKM 968

Query: 642  KKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTAL 701
                +  APG +  E+G   H F +GD+ HP++  IY +L+KL   MR AG++ +     
Sbjct: 969  LDENVKNAPGMSWFEIGKQVHEFVAGDRSHPKTDEIYVVLDKLELLMRRAGYEADKGL-- 1026

Query: 702  HDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRV 761
             DVE+E KE  +  HSE++AIAFGLIAT P T ++I+KNLRVC DCHTATK+IS V GR 
Sbjct: 1027 -DVEDELKEKALGYHSERIAIAFGLIATPPETTLKIVKNLRVCGDCHTATKYISMVMGRE 1085

Query: 762  IVVRDANRFHHFKGGVCSCGDYW 784
            I+VRD+ RFHHF  G CSC D W
Sbjct: 1086 IIVRDSLRFHHFSNGTCSCKDCW 1108



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 144/556 (25%), Positives = 258/556 (46%), Gaps = 35/556 (6%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSN-NEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAA 118
           A A+F  + + ++  +  +I   +      ++   F T L +++A  P+++T   +L+A 
Sbjct: 79  AHAIFSKMEERNVVSWTALISANAQCGAFARAFALFRTMLLESSA-APNSYTLVAMLNAC 137

Query: 119 SACCDRSIGVLLHGH----AIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDT 174
           +   D +IG  +H       +     +   VG A++++Y K   ++ A  VF  +PEKD 
Sbjct: 138 ANSRDLAIGRSIHAMIWELGLERASTTATLVGNAMINMYAKCGSLEDAIAVFLAIPEKDV 197

Query: 175 VLWNSMISGLMKNCCF-QDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQ 233
           V W +M     +   F  D++ +F +M+        + +V   + A+     LR G  + 
Sbjct: 198 VSWTAMAGAYAQERRFYPDALRIFREMLLQP----LAPNVITFITALGACTSLRDGTWLH 253

Query: 234 CL--GLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRP---DLISCNAMISGYTC 288
            L     LGF         L++ Y KCG+ E A  +F+ +      DL+S NAMIS    
Sbjct: 254 SLLHEASLGFDP--LASNALINMYGKCGDWEGAYSVFKAMASRQELDLVSWNAMISASVE 311

Query: 289 NGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFG-HLHLTNCIHSFCLKSGIVSNSS 347
            G+   ++ +FR+L     R NS T++ ++      G         H    +SG + +  
Sbjct: 312 AGRHGDAMAIFRRLRLEGMRPNSVTLITILNALAASGVDFGAARGFHGRIWESGYLRDVV 371

Query: 348 VLTALSTVYSRLNEMEAARKLFDESSEK-SLASWNAMIAGYTQNGLTEEAISLFQEMQAS 406
           +  A+ ++Y++     AA  +F     K  + SWN M+          + ++ F  M  +
Sbjct: 372 IGNAIISMYAKCGFFSAAWAVFRRIRWKCDVISWNTMLGASEDRKSFGKVVNTFHHMLLA 431

Query: 407 KVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRN---FESNIYVSTALIDMYAKCGNI 463
            + PN V+  +IL+AC+   A+  G+ +H L+ +R     ES+  V+T L+ MY KCG+I
Sbjct: 432 GIDPNKVSFIAILNACSNSEALDFGRKIHSLILTRRRDYVESS--VATMLVSMYGKCGSI 489

Query: 464 VEARELFDLM--SHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLY 521
            EA  +F  M    +S VTWN M+  Y  +    EA     EML  G+ P  ++F SVL 
Sbjct: 490 SEAELVFKEMPLPSRSLVTWNVMLGAYAQNDRSKEAFGALMEMLQGGVLPDALSFTSVLS 549

Query: 522 ACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGP 581
           +C       +  ++ +  I + G++      A ++ + GR  +LE+A      +  + G 
Sbjct: 550 SC----YCSQEAQVLRMCILESGYRSACLETA-LISMHGRCRELEQARSVFNEM--DHGD 602

Query: 582 AV-WGALLGACMIHKD 596
            V W A++ A   ++D
Sbjct: 603 VVSWTAMVSATAENRD 618



 Score =  162 bits (411), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 133/517 (25%), Positives = 243/517 (47%), Gaps = 26/517 (5%)

Query: 131 HGHAIVSGYGSD--LFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNC 188
           H H +++  G +  LF+G  L+++Y +   ++ A  +F KM E++ V W ++IS   +  
Sbjct: 46  HAHELIANAGLEQHLFLGNCLINMYVRCGSLEEAHAIFSKMEERNVVSWTALISANAQCG 105

Query: 189 CFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQC----LGLKLGFHDH 244
            F  +  +F  M+       +S ++ A+L A A  ++L +G  I      LGL+      
Sbjct: 106 AFARAFALFRTMLLESSAAPNSYTLVAMLNACANSRDLAIGRSIHAMIWELGLERASTTA 165

Query: 245 VYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGK-TESSLRLFRQLL 303
             V   +++ Y+KCG +E A  +F  I   D++S  AM   Y    +    +LR+FR++L
Sbjct: 166 TLVGNAMINMYAKCGSLEDAIAVFLAIPEKDVVSWTAMAGAYAQERRFYPDALRIFREML 225

Query: 304 ASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEME 363
                 N   ++  I        L     +HS   ++ +  +     AL  +Y +  + E
Sbjct: 226 LQPLAPN---VITFITALGACTSLRDGTWLHSLLHEASLGFDPLASNALINMYGKCGDWE 282

Query: 364 AARKLFD---ESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILS 420
            A  +F       E  L SWNAMI+   + G   +A+++F+ ++   + PN VT+ +IL+
Sbjct: 283 GAYSVFKAMASRQELDLVSWNAMISASVEAGRHGDAMAIFRRLRLEGMRPNSVTLITILN 342

Query: 421 ACAQLGA-ISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEV 479
           A A  G      +  H  +    +  ++ +  A+I MYAKCG    A  +F  +  K +V
Sbjct: 343 ALAASGVDFGAARGFHGRIWESGYLRDVVIGNAIISMYAKCGFFSAAWAVFRRIRWKCDV 402

Query: 480 -TWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQS 538
            +WNTM+          + +  F  ML +GI P+ V+F+++L ACS++  +  G +I  S
Sbjct: 403 ISWNTMLGASEDRKSFGKVVNTFHHMLLAGIDPNKVSFIAILNACSNSEALDFGRKI-HS 461

Query: 539 MIHDHGFKPLAEHYACM-VDILGRAGQLEKALEFIKGLAVEPGPAV-WGALLGACMIHKD 596
           +I       +    A M V + G+ G + +A    K + +     V W  +LGA   +  
Sbjct: 462 LILTRRRDYVESSVATMLVSMYGKCGSISEAELVFKEMPLPSRSLVTWNVMLGA---YAQ 518

Query: 597 TNLARVASEKLFEL-----DPENVGYHVLLSNIYSAE 628
            + ++ A   L E+      P+ + +  +LS+ Y ++
Sbjct: 519 NDRSKEAFGALMEMLQGGVLPDALSFTSVLSSCYCSQ 555



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 117/462 (25%), Positives = 202/462 (43%), Gaps = 34/462 (7%)

Query: 209 DSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLF 268
           D     A+L +  +  +L  G     L    G   H+++   L++ Y +CG +E A  +F
Sbjct: 24  DLQEYTALLQSCVDSNDLAKGKHAHELIANAGLEQHLFLGNCLINMYVRCGSLEEAHAIF 83

Query: 269 RDIVRPDLISCNAMISGYTCNGKTESSLRLFR-QLLASAERVNSSTIVGLIPVFYPFGHL 327
             +   +++S  A+IS     G    +  LFR  LL S+   NS T+V ++        L
Sbjct: 84  SKMEERNVVSWTALISANAQCGAFARAFALFRTMLLESSAAPNSYTLVAMLNACANSRDL 143

Query: 328 HLTNCIHSFCLKSGIVSNSSVLT----ALSTVYSRLNEMEAARKLFDESSEKSLASWNAM 383
            +   IH+   + G+   S+  T    A+  +Y++   +E A  +F    EK + SW AM
Sbjct: 144 AIGRSIHAMIWELGLERASTTATLVGNAMINMYAKCGSLEDAIAVFLAIPEKDVVSWTAM 203

Query: 384 IAGYTQ-NGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRN 442
              Y Q      +A+ +F+EM    +APN +T  + L AC  L     G W+H L+   +
Sbjct: 204 AGAYAQERRFYPDALRIFREMLLQPLAPNVITFITALGACTSLRD---GTWLHSLLHEAS 260

Query: 443 FESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSE---VTWNTMISGYGLHGHGLEALQ 499
              +   S ALI+MY KCG+   A  +F  M+ + E   V+WN MIS     G   +A+ 
Sbjct: 261 LGFDPLASNALINMYGKCGDWEGAYSVFKAMASRQELDLVSWNAMISASVEAGRHGDAMA 320

Query: 500 LFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDIL 559
           +F  +   G+RP+ VT +++L A + +G+       F   I + G+         ++ + 
Sbjct: 321 IFRRLRLEGMRPNSVTLITILNALAASGVDFGAARGFHGRIWESGYLRDVVIGNAIISMY 380

Query: 560 GRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASE----KLFELDPENV 615
            + G    A    + +  +     W  +LGA    K  +  +V +      L  +DP  V
Sbjct: 381 AKCGFFSAAWAVFRRIRWKCDVISWNTMLGASEDRK--SFGKVVNTFHHMLLAGIDPNKV 438

Query: 616 GYHVLL----------------SNIYSAERDYLQAATVRQVV 641
            +  +L                S I +  RDY++++    +V
Sbjct: 439 SFIAILNACSNSEALDFGRKIHSLILTRRRDYVESSVATMLV 480


>gi|125534384|gb|EAY80932.1| hypothetical protein OsI_36110 [Oryza sativa Indica Group]
          Length = 770

 Score =  421 bits (1081), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 227/668 (33%), Positives = 372/668 (55%), Gaps = 15/668 (2%)

Query: 130 LHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCC 189
           +HGH   +G G+D+FV  +LV+ Y +    + AR++FD MPE++ V W ++++G   N  
Sbjct: 100 VHGHMAKTGAGADMFVATSLVNAYMRCGAARDARRLFDGMPERNVVTWTALVTGYTLNSQ 159

Query: 190 FQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLT 249
               + VF +M+  G  +    ++ A L A     ++ LG ++    +K G      +  
Sbjct: 160 PALGLEVFVEMLEMG-RYPSHYTLGATLNACLASCDVDLGKQVHGYAIKYGAESITSMGN 218

Query: 250 GLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGK-TESSLRLFRQLLASAER 308
            L S Y+K G ++ A   F  I   ++I+   MIS    + +  E  L LF  +L     
Sbjct: 219 SLCSLYAKLGSLDSALRAFWRIPEKNVITWTTMISACAEDEECVELGLSLFIDMLMDGVM 278

Query: 309 VNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKL 368
            N  T+  ++ +      L+L   + +F  K G  +N  V  +   +Y R  E + A +L
Sbjct: 279 PNEFTLTSVMSLCGTRLDLNLGKQVQAFSFKIGCETNLPVKNSTMYLYLRKGETDEAMRL 338

Query: 369 FDESSEKSLASWNAMIAGYTQ------NGLTE-----EAISLFQEMQASKVAPNPVTVSS 417
           F++  + S+ +WNAMI+GY Q      + L       +A+++F++++ S + P+  T SS
Sbjct: 339 FEQMEDASIITWNAMISGYAQIMDSAKDDLQARSRGFQALTIFRDLKRSVMKPDLFTFSS 398

Query: 418 ILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKS 477
           ILS C+ + A+  G+ +H       F S++ V++AL++MY KCG I +A + F  M  ++
Sbjct: 399 ILSVCSAMMALEQGEQIHAQTIKSGFLSDVVVNSALVNMYNKCGCIQDANKAFLEMPTRT 458

Query: 478 EVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQ 537
            VTW +MISGY  HG   EA+QLF EM  +G+RP+ +TF+S+L ACS+AGLV E +  F 
Sbjct: 459 FVTWTSMISGYSQHGQPQEAIQLFEEMRLAGVRPNEITFVSLLSACSYAGLVEEAEHYFD 518

Query: 538 SMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDT 597
            M  ++  +P+ +HY CM+D+  R G++E A  FIK    EP  A+W +L+  C  H + 
Sbjct: 519 MMKKEYCIEPVVDHYGCMIDMFVRLGRVEDAFSFIKRTGFEPNEAIWSSLVAGCRSHGNM 578

Query: 598 NLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEV 657
            LA  A++KL EL P+ +  ++LL N+Y +   +   A VR+++K+  +      + I +
Sbjct: 579 ELAFYAADKLLELKPKGIETYILLLNMYISTERWQDVARVRKLMKQEDVGILRDRSWITI 638

Query: 658 GGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELM--MKV 715
               + F + D+ HPQ+T +Y +LE L  K +  G++      L D E++EK     +K 
Sbjct: 639 KDKVYFFRANDRTHPQATELYQLLENLLEKAKAIGYEPYQNAELSDSEDDEKPAAGSLKH 698

Query: 716 HSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKG 775
           HSE+LA+A GL+ T PG  +R+ KN+ +C DCH++ K  S +  R I+VRD+ R H FK 
Sbjct: 699 HSERLAVALGLLQTPPGATVRVTKNITMCRDCHSSIKLFSLLENREIIVRDSKRLHKFKD 758

Query: 776 GVCSCGDY 783
           G CSCGD+
Sbjct: 759 GRCSCGDF 766



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 132/500 (26%), Positives = 242/500 (48%), Gaps = 18/500 (3%)

Query: 29  HAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNEMP 88
           H  +   G   D+   T L +      A   AR LF  +P+ ++  +  ++ G++ N  P
Sbjct: 101 HGHMAKTGAGADMFVATSLVNAYMRCGAARDARRLFDGMPERNVVTWTALVTGYTLNSQP 160

Query: 89  KSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAA 148
              +  +  + +     P ++T    L+A  A CD  +G  +HG+AI  G  S   +G +
Sbjct: 161 ALGLEVFVEMLE-MGRYPSHYTLGATLNACLASCDVDLGKQVHGYAIKYGAESITSMGNS 219

Query: 149 LVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKN-CCFQDSIWVFGDMVRNGGTW 207
           L  LY K   + SA + F ++PEK+ + W +MIS   ++  C +  + +F DM+ + G  
Sbjct: 220 LCSLYAKLGSLDSALRAFWRIPEKNVITWTTMISACAEDEECVELGLSLFIDMLMD-GVM 278

Query: 208 LDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELL 267
            +  ++ +V+       +L LG ++Q    K+G   ++ V    +  Y + GE + A  L
Sbjct: 279 PNEFTLTSVMSLCGTRLDLNLGKQVQAFSFKIGCETNLPVKNSTMYLYLRKGETDEAMRL 338

Query: 268 FRDIVRPDLISCNAMISGYT-----------CNGKTESSLRLFRQLLASAERVNSSTIVG 316
           F  +    +I+ NAMISGY               +   +L +FR L  S  + +  T   
Sbjct: 339 FEQMEDASIITWNAMISGYAQIMDSAKDDLQARSRGFQALTIFRDLKRSVMKPDLFTFSS 398

Query: 317 LIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKS 376
           ++ V      L     IH+  +KSG +S+  V +AL  +Y++   ++ A K F E   ++
Sbjct: 399 ILSVCSAMMALEQGEQIHAQTIKSGFLSDVVVNSALVNMYNKCGCIQDANKAFLEMPTRT 458

Query: 377 LASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHE 436
             +W +MI+GY+Q+G  +EAI LF+EM+ + V PN +T  S+LSAC+  G +   +   +
Sbjct: 459 FVTWTSMISGYSQHGQPQEAIQLFEEMRLAGVRPNEITFVSLLSACSYAGLVEEAEHYFD 518

Query: 437 LVKSRN-FESNIYVSTALIDMYAKCGNIVEARELFDLMSHK-SEVTWNTMISGYGLHGHG 494
           ++K     E  +     +IDM+ + G + +A         + +E  W+++++G   HG+ 
Sbjct: 519 MMKKEYCIEPVVDHYGCMIDMFVRLGRVEDAFSFIKRTGFEPNEAIWSSLVAGCRSHGNM 578

Query: 495 LEALQLFSEMLHSGIRPSGV 514
             A     ++L   ++P G+
Sbjct: 579 ELAFYAADKLLE--LKPKGI 596



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 72/240 (30%), Positives = 109/240 (45%), Gaps = 6/240 (2%)

Query: 290 GKTESSLRLFR-----QLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVS 344
           G  E+ LR         +L   + V S+  V L+      G L     +H    K+G  +
Sbjct: 52  GGMEAPLRTLDVQEAMTMLTEGKAVQSAMYVPLLHRCVEMGSLGAARAVHGHMAKTGAGA 111

Query: 345 NSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQ 404
           +  V T+L   Y R      AR+LFD   E+++ +W A++ GYT N      + +F EM 
Sbjct: 112 DMFVATSLVNAYMRCGAARDARRLFDGMPERNVVTWTALVTGYTLNSQPALGLEVFVEML 171

Query: 405 ASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIV 464
                P+  T+ + L+AC     + LGK VH        ES   +  +L  +YAK G++ 
Sbjct: 172 EMGRYPSHYTLGATLNACLASCDVDLGKQVHGYAIKYGAESITSMGNSLCSLYAKLGSLD 231

Query: 465 EARELFDLMSHKSEVTWNTMISGYGLHGHGLE-ALQLFSEMLHSGIRPSGVTFLSVLYAC 523
            A   F  +  K+ +TW TMIS        +E  L LF +ML  G+ P+  T  SV+  C
Sbjct: 232 SALRAFWRIPEKNVITWTTMISACAEDEECVELGLSLFIDMLMDGVMPNEFTLTSVMSLC 291



 Score = 43.1 bits (100), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 38/181 (20%), Positives = 74/181 (40%), Gaps = 17/181 (9%)

Query: 12  FLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPD 71
            LS+        Q  Q HAQ I  GF +D+   + L +  +       A   F  +P   
Sbjct: 399 ILSVCSAMMALEQGEQIHAQTIKSGFLSDVVVNSALVNMYNKCGCIQDANKAFLEMPTRT 458

Query: 72  LFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASAC-----CDRSI 126
              +  +I G+S +  P+ +I  +  +R    + P+  T+  +LSA S        +   
Sbjct: 459 FVTWTSMISGYSQHGQPQEAIQLFEEMRL-AGVRPNEITFVSLLSACSYAGLVEEAEHYF 517

Query: 127 GVLLHGHAI---VSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMP-EKDTVLWNSMIS 182
            ++   + I   V  YG        ++D++ +   V+ A     +   E +  +W+S+++
Sbjct: 518 DMMKKEYCIEPVVDHYG-------CMIDMFVRLGRVEDAFSFIKRTGFEPNEAIWSSLVA 570

Query: 183 G 183
           G
Sbjct: 571 G 571


>gi|302785459|ref|XP_002974501.1| hypothetical protein SELMODRAFT_101455 [Selaginella moellendorffii]
 gi|300158099|gb|EFJ24723.1| hypothetical protein SELMODRAFT_101455 [Selaginella moellendorffii]
          Length = 635

 Score =  421 bits (1081), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 210/550 (38%), Positives = 321/550 (58%), Gaps = 6/550 (1%)

Query: 240 GFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLF 299
           GF    Y+   LV  Y KCG ++ A+ +F    R ++ S   M++ +  NG    +L L 
Sbjct: 87  GFKSSRYLCNLLVEMYGKCGSLQAAKSVFHITPRRNVFSWTIMVAAFAHNGHYMDALNLL 146

Query: 300 RQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRL 359
             +       NS T + L+        L     +H      G +++  V   L  +Y++ 
Sbjct: 147 EIMDLEGISPNSITFIELLGAVAALSWLDRGRALHRRIACCGFLADIFVANCLINMYAKC 206

Query: 360 NEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSIL 419
             +  A  +F+  + +S+ +W A++A Y  NG   +A+ +F  M    V P  VT  +++
Sbjct: 207 RSLADACSVFESLTSRSVIAWTALVAAYALNGFFRDALKVFLLMTLDGVEPTEVTFVTVV 266

Query: 420 SACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEV 479
             CA +    +G+ VH ++ +R+ E+N+ V  ALI+MY KC +  EAR++FD M  K  +
Sbjct: 267 DVCADIAVFGIGREVHGVIDARS-EANVCVGNALINMYGKCASPDEARKVFDAMQRKDII 325

Query: 480 TWNTMISGYGLHGHGLEALQLFSEMLHS-----GIRPSGVTFLSVLYACSHAGLVREGDE 534
           TWN+MI+ YG +G+G +AL+++  M  S     GI    +TF+ VL+ACSHAGLV++  +
Sbjct: 326 TWNSMIAVYGQNGYGFQALEIYKRMQESRMTILGITHDDITFIGVLFACSHAGLVKDSCK 385

Query: 535 IFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIH 594
           ++ SMI D+GFKP +    C++D+LGRAG L++A EFI  +   P   +W  LLGAC+ H
Sbjct: 386 LYSSMIGDYGFKPTSLQCGCLIDLLGRAGWLDEAEEFINSMPYHPDHTIWTILLGACITH 445

Query: 595 KDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTL 654
            D   A  A++++  L P + G +V LSN+Y+    +   A +R+++ +R + K  G + 
Sbjct: 446 ADVERAARAADRIMALRPTDSGSYVALSNLYALAERWDDMARMRKLMDQRGVFKMAGKSS 505

Query: 655 IEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMK 714
           IE+GG  H F +GD  HP+   IY  L ++ G +RE G+  +    LH+   E KE M  
Sbjct: 506 IEIGGVLHEFIAGDTSHPRKREIYEELRRIEGVIRERGYVPDIKAVLHNAAREAKEKMCC 565

Query: 715 VHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFK 774
            HSE+LAIAFG+I++  GTE+RI+KNLRVC DCH+ATK ISK +GR I+VRDANRFH F+
Sbjct: 566 FHSERLAIAFGMISSPGGTELRIMKNLRVCPDCHSATKIISKFSGRKIIVRDANRFHEFR 625

Query: 775 GGVCSCGDYW 784
            G CSC DYW
Sbjct: 626 NGSCSCEDYW 635



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 96/406 (23%), Positives = 179/406 (44%), Gaps = 14/406 (3%)

Query: 127 GVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMK 186
           G  +H H ++ G+ S  ++   LV++Y K   +++A+ VF   P ++   W  M++    
Sbjct: 76  GKRIHYHIVLCGFKSSRYLCNLLVEMYGKCGSLQAAKSVFHITPRRNVFSWTIMVAAFAH 135

Query: 187 NCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVY 246
           N  + D++ +   M   G +  +S +   +L AVA +  L  G  +       GF   ++
Sbjct: 136 NGHYMDALNLLEIMDLEGIS-PNSITFIELLGAVAALSWLDRGRALHRRIACCGFLADIF 194

Query: 247 VLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASA 306
           V   L++ Y+KC  +  A  +F  +    +I+  A+++ Y  NG    +L++F  +    
Sbjct: 195 VANCLINMYAKCRSLADACSVFESLTSRSVIAWTALVAAYALNGFFRDALKVFLLMTLDG 254

Query: 307 ERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAAR 366
                 T V ++ V        +   +H   + +   +N  V  AL  +Y +    + AR
Sbjct: 255 VEPTEVTFVTVVDVCADIAVFGIGREVHGV-IDARSEANVCVGNALINMYGKCASPDEAR 313

Query: 367 KLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASK-----VAPNPVTVSSILSA 421
           K+FD    K + +WN+MIA Y QNG   +A+ +++ MQ S+     +  + +T   +L A
Sbjct: 314 KVFDAMQRKDIITWNSMIAVYGQNGYGFQALEIYKRMQESRMTILGITHDDITFIGVLFA 373

Query: 422 CAQLGAISLG-KWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMS-HKSEV 479
           C+  G +    K    ++    F+        LID+  + G + EA E  + M  H    
Sbjct: 374 CSHAGLVKDSCKLYSSMIGDYGFKPTSLQCGCLIDLLGRAGWLDEAEEFINSMPYHPDHT 433

Query: 480 TWNTMISGYGLHGHGLEALQLFSEMLHSGIRPS---GVTFLSVLYA 522
            W  ++     H     A +    ++   +RP+       LS LYA
Sbjct: 434 IWTILLGACITHADVERAARAADRIM--ALRPTDSGSYVALSNLYA 477



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 57/203 (28%), Positives = 113/203 (55%)

Query: 333 IHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGL 392
           IH   +  G  S+  +   L  +Y +   ++AA+ +F  +  +++ SW  M+A +  NG 
Sbjct: 79  IHYHIVLCGFKSSRYLCNLLVEMYGKCGSLQAAKSVFHITPRRNVFSWTIMVAAFAHNGH 138

Query: 393 TEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTA 452
             +A++L + M    ++PN +T   +L A A L  +  G+ +H  +    F ++I+V+  
Sbjct: 139 YMDALNLLEIMDLEGISPNSITFIELLGAVAALSWLDRGRALHRRIACCGFLADIFVANC 198

Query: 453 LIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPS 512
           LI+MYAKC ++ +A  +F+ ++ +S + W  +++ Y L+G   +AL++F  M   G+ P+
Sbjct: 199 LINMYAKCRSLADACSVFESLTSRSVIAWTALVAAYALNGFFRDALKVFLLMTLDGVEPT 258

Query: 513 GVTFLSVLYACSHAGLVREGDEI 535
            VTF++V+  C+   +   G E+
Sbjct: 259 EVTFVTVVDVCADIAVFGIGREV 281



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 62/279 (22%), Positives = 133/279 (47%), Gaps = 3/279 (1%)

Query: 27  QTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNE 86
           + H  I++ GF++       L        +   A+++F   P+ ++F + +++  F++N 
Sbjct: 78  RIHYHIVLCGFKSSRYLCNLLVEMYGKCGSLQAAKSVFHITPRRNVFSWTIMVAAFAHNG 137

Query: 87  MPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVG 146
               ++     +     ++P++ T+  +L A +A      G  LH      G+ +D+FV 
Sbjct: 138 HYMDALNLL-EIMDLEGISPNSITFIELLGAVAALSWLDRGRALHRRIACCGFLADIFVA 196

Query: 147 AALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGT 206
             L+++Y K   +  A  VF+ +  +  + W ++++    N  F+D++ VF  M  +G  
Sbjct: 197 NCLINMYAKCRSLADACSVFESLTSRSVIAWTALVAAYALNGFFRDALKVFLLMTLDGVE 256

Query: 207 WLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAEL 266
             + T V  V+   A++    +G E+  + +      +V V   L++ Y KC   + A  
Sbjct: 257 PTEVTFV-TVVDVCADIAVFGIGREVHGV-IDARSEANVCVGNALINMYGKCASPDEARK 314

Query: 267 LFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLAS 305
           +F  + R D+I+ N+MI+ Y  NG    +L +++++  S
Sbjct: 315 VFDAMQRKDIITWNSMIAVYGQNGYGFQALEIYKRMQES 353



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 51/192 (26%), Positives = 96/192 (50%), Gaps = 6/192 (3%)

Query: 401 QEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKC 460
           Q ++   V+P+   ++  L  C    AI+ GK +H  +    F+S+ Y+   L++MY KC
Sbjct: 46  QLLEDRSVSPSAEVLAWYLRRCGSEAAIAEGKRIHYHIVLCGFKSSRYLCNLLVEMYGKC 105

Query: 461 GNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVL 520
           G++  A+ +F +   ++  +W  M++ +  +GH ++AL L   M   GI P+ +TF+ +L
Sbjct: 106 GSLQAAKSVFHITPRRNVFSWTIMVAAFAHNGHYMDALNLLEIMDLEGISPNSITFIELL 165

Query: 521 YACSHAGLVREGDEIFQSMIHDHGFKPLAEHYA--CMVDILGRAGQLEKALEFIKGLAVE 578
            A +    +  G  + +  I   GF  LA+ +   C++++  +   L  A    + L   
Sbjct: 166 GAVAALSWLDRGRALHRR-IACCGF--LADIFVANCLINMYAKCRSLADACSVFESLTSR 222

Query: 579 PGPAVWGALLGA 590
              A W AL+ A
Sbjct: 223 SVIA-WTALVAA 233


>gi|326519957|dbj|BAK03903.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 598

 Score =  421 bits (1081), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 197/448 (43%), Positives = 281/448 (62%), Gaps = 1/448 (0%)

Query: 338 LKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAI 397
           L++    ++S    L T ++R   +  AR LFDE  E++  SW+AM+ GY Q G   EA+
Sbjct: 151 LRTSAAVDASTFNTLITAHARAGRVADARSLFDEMPERNAVSWSAMVNGYVQAGDGREAL 210

Query: 398 SLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMY 457
            +F +MQA  V P+   +  +L+ACAQLGA+  GKWVH  +K+ N    +++ TAL+DMY
Sbjct: 211 GVFSQMQAQGVRPDDTVLVGVLAACAQLGALEQGKWVHGYLKANNIRMTVFLGTALVDMY 270

Query: 458 AKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFL 517
           AKCG +    E+F+ M  K+ + W TMI G  +HG G ++L LFS+M  SG++P  + F+
Sbjct: 271 AKCGEVQLGMEVFEGMKDKNVLAWTTMIKGLAMHGRGSDSLTLFSQMESSGVKPDDIAFI 330

Query: 518 SVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAV 577
             L AC+H GLV +G E+F SM++++G KP  EHY CMVD+L R G L +A + ++ + +
Sbjct: 331 GALCACTHTGLVDKGRELFNSMVNNYGIKPKIEHYGCMVDLLARNGLLSEARDMVEKMPM 390

Query: 578 EPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATV 637
           +P   +WGAL+  C  HK+  LA    +   EL+P+  G +VLL NIYSA   +  A  +
Sbjct: 391 KPDALIWGALMAGCRFHKNVELAEYVIKHWIELEPDKSGAYVLLGNIYSASGRHASAREI 450

Query: 638 RQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMR-EAGFQTE 696
           R +++++ + K PGC+ +E+ G  H F  GD  HP+   I     +++ ++R E G+  +
Sbjct: 451 RNLMREKGVEKTPGCSNVEIKGVIHQFIVGDLSHPRIKDILTKWYEIDSRIRLEEGYVPD 510

Query: 697 TVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISK 756
               L D+EEEE E  +  HSEKLAIAF LI+TE    IRI+KNLRVC DCH  TK ISK
Sbjct: 511 KKEVLLDIEEEEMESALSRHSEKLAIAFALISTEDYMPIRIVKNLRVCQDCHHVTKLISK 570

Query: 757 VTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           V GR I+VRD  RFH FK G CSC DYW
Sbjct: 571 VYGREIIVRDRTRFHLFKDGTCSCKDYW 598



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 59/243 (24%), Positives = 125/243 (51%), Gaps = 2/243 (0%)

Query: 251 LVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVN 310
           L++ +++ G V  A  LF ++   + +S +AM++GY   G    +L +F Q+ A   R +
Sbjct: 165 LITAHARAGRVADARSLFDEMPERNAVSWSAMVNGYVQAGDGREALGVFSQMQAQGVRPD 224

Query: 311 SSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFD 370
            + +VG++      G L     +H +   + I     + TAL  +Y++  E++   ++F+
Sbjct: 225 DTVLVGVLAACAQLGALEQGKWVHGYLKANNIRMTVFLGTALVDMYAKCGEVQLGMEVFE 284

Query: 371 ESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISL 430
              +K++ +W  MI G   +G   ++++LF +M++S V P+ +     L AC   G +  
Sbjct: 285 GMKDKNVLAWTTMIKGLAMHGRGSDSLTLFSQMESSGVKPDDIAFIGALCACTHTGLVDK 344

Query: 431 GKWV-HELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSE-VTWNTMISGY 488
           G+ + + +V +   +  I     ++D+ A+ G + EAR++ + M  K + + W  +++G 
Sbjct: 345 GRELFNSMVNNYGIKPKIEHYGCMVDLLARNGLLSEARDMVEKMPMKPDALIWGALMAGC 404

Query: 489 GLH 491
             H
Sbjct: 405 RFH 407



 Score = 99.0 bits (245), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 99/445 (22%), Positives = 183/445 (41%), Gaps = 84/445 (18%)

Query: 74  LFNVIIRGFSNNEMPKSSICFYTHL-RKNTALTP---DNFTYSFVLSAASACCDRSIGVL 129
           L + +IR  +++  P++++  Y HL R     TP    +   S  LS A     R + + 
Sbjct: 55  LHDALIRAHASSGRPQAALPLYAHLIRAGLFPTPHTLPSLLKSLALSPAVPGA-RRLALA 113

Query: 130 LHGHAIVSGYGSDLFVGAALVDLYF--------------------------------KFS 157
           +H HA+  G    L V  AL+ ++                                 +  
Sbjct: 114 VHAHAVRLGLAGFLLVNNALIRVHAGLLGRLADAHLLLRTSAAVDASTFNTLITAHARAG 173

Query: 158 WVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVL 217
            V  AR +FD+MPE++ V W++M++G ++    ++++ VF  M +  G   D T +  VL
Sbjct: 174 RVADARSLFDEMPERNAVSWSAMVNGYVQAGDGREALGVFSQM-QAQGVRPDDTVLVGVL 232

Query: 218 PAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLI 277
            A A++  L  G  +            V++ T LV  Y+KCGEV+    +F  +   +++
Sbjct: 233 AACAQLGALEQGKWVHGYLKANNIRMTVFLGTALVDMYAKCGEVQLGMEVFEGMKDKNVL 292

Query: 278 SCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFC 337
           +   MI G   +G+   SL LF Q+ +S  + +    +G            L  C H+  
Sbjct: 293 AWTTMIKGLAMHGRGSDSLTLFSQMESSGVKPDDIAFIGA-----------LCACTHTGL 341

Query: 338 LKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDE-----SSEKSLASWNAMIAGYTQNGL 392
           +  G                        R+LF+        +  +  +  M+    +NGL
Sbjct: 342 VDKG------------------------RELFNSMVNNYGIKPKIEHYGCMVDLLARNGL 377

Query: 393 TEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWV-HELVKSRNFESNIYVST 451
             EA  + ++M    + P+ +   ++++ C     + L ++V    ++    +S  YV  
Sbjct: 378 LSEARDMVEKM---PMKPDALIWGALMAGCRFHKNVELAEYVIKHWIELEPDKSGAYV-- 432

Query: 452 ALIDMYAKCGNIVEARELFDLMSHK 476
            L ++Y+  G    ARE+ +LM  K
Sbjct: 433 LLGNIYSASGRHASAREIRNLMREK 457



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 47/180 (26%), Positives = 88/180 (48%), Gaps = 8/180 (4%)

Query: 25  LTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSN 84
           L +T A +    F N L T    A R++D      AR+LF  +P+ +   ++ ++ G+  
Sbjct: 150 LLRTSAAVDASTF-NTLITAHARAGRVAD------ARSLFDEMPERNAVSWSAMVNGYVQ 202

Query: 85  NEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLF 144
               + ++  ++ ++    + PD+     VL+A +       G  +HG+   +     +F
Sbjct: 203 AGDGREALGVFSQMQAQ-GVRPDDTVLVGVLAACAQLGALEQGKWVHGYLKANNIRMTVF 261

Query: 145 VGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNG 204
           +G ALVD+Y K   V+   +VF+ M +K+ + W +MI GL  +    DS+ +F  M  +G
Sbjct: 262 LGTALVDMYAKCGEVQLGMEVFEGMKDKNVLAWTTMIKGLAMHGRGSDSLTLFSQMESSG 321



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 54/250 (21%), Positives = 101/250 (40%), Gaps = 38/250 (15%)

Query: 381 NAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACA----QLGAISLGKWVHE 436
           +A+I  +  +G  + A+ L+  +  + + P P T+ S+L + A      GA  L   VH 
Sbjct: 57  DALIRAHASSGRPQAALPLYAHLIRAGLFPTPHTLPSLLKSLALSPAVPGARRLALAVHA 116

Query: 437 LVKSRNFESNIYVSTALIDMYAKC-GNIVEARELFDLMSHKSEVTWNTMIS--------- 486
                     + V+ ALI ++A   G + +A  L    +     T+NT+I+         
Sbjct: 117 HAVRLGLAGFLLVNNALIRVHAGLLGRLADAHLLLRTSAAVDASTFNTLITAHARAGRVA 176

Query: 487 ----------------------GYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACS 524
                                 GY   G G EAL +FS+M   G+RP     + VL AC+
Sbjct: 177 DARSLFDEMPERNAVSWSAMVNGYVQAGDGREALGVFSQMQAQGVRPDDTVLVGVLAACA 236

Query: 525 HAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVW 584
             G + +G  +    +  +  +        +VD+  + G+++  +E  +G+  +     W
Sbjct: 237 QLGALEQGKWV-HGYLKANNIRMTVFLGTALVDMYAKCGEVQLGMEVFEGMK-DKNVLAW 294

Query: 585 GALLGACMIH 594
             ++    +H
Sbjct: 295 TTMIKGLAMH 304


>gi|326522230|dbj|BAK04243.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 628

 Score =  420 bits (1080), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 209/444 (47%), Positives = 286/444 (64%), Gaps = 1/444 (0%)

Query: 342 IVSNSSV-LTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLF 400
           IVS   V +TA+    S   +++ AR+LFD   ++   +WNAM+ GY + G + EA+ LF
Sbjct: 185 IVSPDVVCVTAMLGALSAGGDVDTARELFDGMPQRDHVAWNAMLTGYVRVGRSREALGLF 244

Query: 401 QEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKC 460
            EMQ + VA + VT+ S+L+ACAQ+GA+  G WVH  V SR    ++ + TAL+DMY+KC
Sbjct: 245 DEMQKAGVAVSEVTLVSVLTACAQMGALERGMWVHSYVCSRGMRVSVTLGTALVDMYSKC 304

Query: 461 GNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVL 520
           G +  + E+F+ M  ++  TW + +SG  ++G G E L+LF  M  +G+ P+GVTF++VL
Sbjct: 305 GVVTMSMEVFETMRERNIYTWTSALSGLAMNGMGEECLELFKRMESAGMEPNGVTFVAVL 364

Query: 521 YACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPG 580
             CS AGLV EG   F SM   H  +P  EHY CMVD+ GRAG+L+ A++FI  + VEP 
Sbjct: 365 RGCSVAGLVEEGRACFDSMKDKHKVEPWLEHYGCMVDLYGRAGRLDDAVDFINSMPVEPH 424

Query: 581 PAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQV 640
             VWGALL A  IH + +L + A  KL E++ +N   HVLLSNIY+   ++   + VR +
Sbjct: 425 EGVWGALLNASRIHNNVDLGKHAMHKLTEIESKNDAAHVLLSNIYAESHNWKGVSKVRNM 484

Query: 641 VKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTA 700
           +K + + K PGC+ IEV G  H F  G + HP+   I  ML +++ ++R  G+   T   
Sbjct: 485 MKSKGVKKMPGCSAIEVDGKVHEFFVGSKSHPRYKDIQTMLAEMSHRLRLQGYAANTKEV 544

Query: 701 LHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGR 760
           L D+EEEEKE  + +HSEKLA+AFGLI     T IRI+KNLRVC DCH  TK ISKV  R
Sbjct: 545 LFDIEEEEKEGAISLHSEKLALAFGLITLPEDTVIRIVKNLRVCKDCHDYTKLISKVFDR 604

Query: 761 VIVVRDANRFHHFKGGVCSCGDYW 784
            IV+RD NRFHHFK G CSC DYW
Sbjct: 605 EIVMRDRNRFHHFKHGACSCRDYW 628



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 76/318 (23%), Positives = 157/318 (49%), Gaps = 10/318 (3%)

Query: 245 VYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLA 304
           V  +T ++   S  G+V+ A  LF  + + D ++ NAM++GY   G++  +L LF ++  
Sbjct: 190 VVCVTAMLGALSAGGDVDTARELFDGMPQRDHVAWNAMLTGYVRVGRSREALGLFDEMQK 249

Query: 305 SAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEA 364
           +   V+  T+V ++      G L     +HS+    G+  + ++ TAL  +YS+   +  
Sbjct: 250 AGVAVSEVTLVSVLTACAQMGALERGMWVHSYVCSRGMRVSVTLGTALVDMYSKCGVVTM 309

Query: 365 ARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQ 424
           + ++F+   E+++ +W + ++G   NG+ EE + LF+ M+++ + PN VT  ++L  C+ 
Sbjct: 310 SMEVFETMRERNIYTWTSALSGLAMNGMGEECLELFKRMESAGMEPNGVTFVAVLRGCSV 369

Query: 425 LGAISLGKWVHELVKSRN-FESNIYVSTALIDMYAKCGNIVEARELFDLMS-HKSEVTWN 482
            G +  G+   + +K ++  E  +     ++D+Y + G + +A +  + M     E  W 
Sbjct: 370 AGLVEEGRACFDSMKDKHKVEPWLEHYGCMVDLYGRAGRLDDAVDFINSMPVEPHEGVWG 429

Query: 483 TMISGYGLHGH---GLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSM 539
            +++   +H +   G  A+   +E+       +    LS +YA SH     +G    ++M
Sbjct: 430 ALLNASRIHNNVDLGKHAMHKLTEI--ESKNDAAHVLLSNIYAESHNW---KGVSKVRNM 484

Query: 540 IHDHGFKPLAEHYACMVD 557
           +   G K +    A  VD
Sbjct: 485 MKSKGVKKMPGCSAIEVD 502



 Score = 99.8 bits (247), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 115/520 (22%), Positives = 213/520 (40%), Gaps = 102/520 (19%)

Query: 11  LFLSLLKGAKTQSQ--LTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIP 68
           L L  L  A +QSQ  L + HA +++ G     S        L+      YAR L    P
Sbjct: 17  LLLPSLVAASSQSQFRLREIHAHLLVSGRLASPSHHADFVASLASSSHLSYARLLLPQRP 76

Query: 69  KPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASAC------- 121
              L   N ++R  +    P  +   +  L     L PD+++++F++ AA++        
Sbjct: 77  A-TLLAHNGLLRALARGPCPGLAFAAFREL----PLAPDHYSFTFLVRAATSLAAAASAT 131

Query: 122 ---CDRSIGVL---LHGHAIVSGYGSDLFVGAALVDLYFKFSWV---------------- 159
               D ++ +L   +H  A   G+ +D  V +  V +Y     V                
Sbjct: 132 PVPTDVAVNLLAGSVHAAAFQHGHATDPHVQSGAVSMYAAVGDVGAVRAAFAEIVSPDVV 191

Query: 160 ---------------KSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNG 204
                           +AR++FD MP++D V WN+M++G ++    ++++ +F +M +  
Sbjct: 192 CVTAMLGALSAGGDVDTARELFDGMPQRDHVAWNAMLTGYVRVGRSREALGLFDEM-QKA 250

Query: 205 GTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERA 264
           G  +   ++ +VL A A++  L  GM +       G    V + T LV  YSKCG V  +
Sbjct: 251 GVAVSEVTLVSVLTACAQMGALERGMWVHSYVCSRGMRVSVTLGTALVDMYSKCGVVTMS 310

Query: 265 ELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPF 324
             +F  +   ++ +  + +SG   NG  E  L LF+++ ++    N  T V ++      
Sbjct: 311 MEVFETMRERNIYTWTSALSGLAMNGMGEECLELFKRMESAGMEPNGVTFVAVL------ 364

Query: 325 GHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKS-----LAS 379
                       C  +G+V                   E  R  FD   +K      L  
Sbjct: 365 ----------RGCSVAGLV-------------------EEGRACFDSMKDKHKVEPWLEH 395

Query: 380 WNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKW-VHEL- 437
           +  M+  Y + G  ++A+     M    V P+     ++L+A      + LGK  +H+L 
Sbjct: 396 YGCMVDLYGRAGRLDDAVDFINSM---PVEPHEGVWGALLNASRIHNNVDLGKHAMHKLT 452

Query: 438 -VKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHK 476
            ++S+N  +++ +S    ++YA+  N     ++ ++M  K
Sbjct: 453 EIESKNDAAHVLLS----NIYAESHNWKGVSKVRNMMKSK 488


>gi|413946615|gb|AFW79264.1| putative pentatricopeptide repeat family protein [Zea mays]
          Length = 682

 Score =  420 bits (1080), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 234/662 (35%), Positives = 365/662 (55%), Gaps = 5/662 (0%)

Query: 123 DRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMIS 182
           D S G  LH   I + +  D+ +   L+  Y K   V  AR VFD MP ++ V  N ++S
Sbjct: 26  DLSKGKALHARLITAAH-FDVVLHNNLISFYAKCGRVGLARTVFDAMPFRNAVSANLLMS 84

Query: 183 GLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFH 242
           G   +   ++S+     ++R     ++   ++A + A A V+   +G +     +K GF 
Sbjct: 85  GYASSGRHKESL----QLLRVVDFGMNEYVLSAAVSATANVRSYDMGRQCHGYAVKAGFA 140

Query: 243 DHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQL 302
           +  YV   ++  Y +C  +E A  +F  +   D  + N+MI+GY   G+ + SL + R +
Sbjct: 141 EQRYVFNAVLYMYCQCAHMEDASKVFESVSGFDAFAFNSMINGYLDRGQLDGSLGIVRNM 200

Query: 303 LASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEM 362
              AE+ +  + V ++          L   +H+  LK  +  N  V +AL  +Y + + +
Sbjct: 201 TGEAEKWDYVSYVAVLGHCASMKDSVLGAQVHAQALKKRLELNVYVGSALVDMYGKCDHV 260

Query: 363 EAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSAC 422
             A + F+   EK++ SW A++  YTQN L E+A+ LF +M+   V PN  T +  L++C
Sbjct: 261 HDANRAFEVLPEKNVVSWTAVMTAYTQNELYEDALQLFLDMEMEGVQPNEFTYAVALNSC 320

Query: 423 AQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWN 482
           A L A+  G  +   V       ++ VS AL++MY+K G+I +A  +F  M  +  V+WN
Sbjct: 321 AGLAALRTGNALGACVMKTGHWDHLLVSNALMNMYSKSGSIEDAHRVFISMPLRDVVSWN 380

Query: 483 TMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHD 542
            +I+GY  HG   E ++ F  ML + + PS VTF+ VL AC+  GLV E      +M+ +
Sbjct: 381 LIITGYAHHGLAREGMEAFHSMLSAAVIPSYVTFVGVLSACAQLGLVDEAFYYLNTMMKE 440

Query: 543 HGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARV 602
            G  P  EHY CMV +L R G+L++A  FI    +      W +LL +C ++K+  L   
Sbjct: 441 VGITPGKEHYTCMVGLLCRVGRLDEAERFIVNNCIGTDVVAWRSLLNSCQVYKNYGLGHR 500

Query: 603 ASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPH 662
            +E++ +L+P +VG +VLLSN+Y+    +     VR+ +++R + K+PG + I VG   H
Sbjct: 501 VAEQILQLEPSDVGTYVLLSNMYAKANRWDGVVKVRKHMRERAVRKSPGVSWIHVGSDVH 560

Query: 663 VFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAI 722
           VFTS +++HPQ   I   LE+L  +++  G+       LHD+++E KE  +  HSEKLA+
Sbjct: 561 VFTSEEKVHPQMDQIAKKLEELIDQIKAIGYVPNFAVVLHDIDDERKEEHLMYHSEKLAL 620

Query: 723 AFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGD 782
           AFGLI T  G  I I+KNLR+C DCH A K IS VT R IVVRDA RFH  +GG+CSC D
Sbjct: 621 AFGLIHTPKGATIHIMKNLRICDDCHVAIKLISVVTSRKIVVRDAVRFHCIEGGICSCND 680

Query: 783 YW 784
           YW
Sbjct: 681 YW 682



 Score =  152 bits (384), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 132/525 (25%), Positives = 235/525 (44%), Gaps = 42/525 (8%)

Query: 14  SLLKGAKTQSQL-TQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATC----YARALFFSIP 68
            L KG    ++L T  H  +++H             + L  F A C     AR +F ++P
Sbjct: 26  DLSKGKALHARLITAAHFDVVLH-------------NNLISFYAKCGRVGLARTVFDAMP 72

Query: 69  KPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGV 128
             +    N+++ G++++   K S+     L +      + +  S  +SA +      +G 
Sbjct: 73  FRNAVSANLLMSGYASSGRHKESL----QLLRVVDFGMNEYVLSAAVSATANVRSYDMGR 128

Query: 129 LLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNC 188
             HG+A+ +G+    +V  A++ +Y + + ++ A KVF+ +   D   +NSMI+G +   
Sbjct: 129 QCHGYAVKAGFAEQRYVFNAVLYMYCQCAHMEDASKVFESVSGFDAFAFNSMINGYLDRG 188

Query: 189 CFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVL 248
               S+ +  +M      W D  S  AVL   A +++  LG ++    LK     +VYV 
Sbjct: 189 QLDGSLGIVRNMTGEAEKW-DYVSYVAVLGHCASMKDSVLGAQVHAQALKKRLELNVYVG 247

Query: 249 TGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAER 308
           + LV  Y KC  V  A   F  +   +++S  A+++ YT N   E +L+LF  +     +
Sbjct: 248 SALVDMYGKCDHVHDANRAFEVLPEKNVVSWTAVMTAYTQNELYEDALQLFLDMEMEGVQ 307

Query: 309 VNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKL 368
            N  T    +        L   N + +  +K+G   +  V  AL  +YS+   +E A ++
Sbjct: 308 PNEFTYAVALNSCAGLAALRTGNALGACVMKTGHWDHLLVSNALMNMYSKSGSIEDAHRV 367

Query: 369 FDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAI 428
           F     + + SWN +I GY  +GL  E +  F  M ++ V P+ VT   +LSACAQLG +
Sbjct: 368 FISMPLRDVVSWNLIITGYAHHGLAREGMEAFHSMLSAAVIPSYVTFVGVLSACAQLGLV 427

Query: 429 SLG-KWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELF-------DLMSHKSEVT 480
                +++ ++K           T ++ +  + G + EA           D+++ +S + 
Sbjct: 428 DEAFYYLNTMMKEVGITPGKEHYTCMVGLLCRVGRLDEAERFIVNNCIGTDVVAWRSLLN 487

Query: 481 WNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGV---TFLSVLYA 522
              +   YGL GH + A Q+        + PS V     LS +YA
Sbjct: 488 SCQVYKNYGL-GHRV-AEQILQ------LEPSDVGTYVLLSNMYA 524


>gi|224111152|ref|XP_002315764.1| predicted protein [Populus trichocarpa]
 gi|222864804|gb|EEF01935.1| predicted protein [Populus trichocarpa]
          Length = 452

 Score =  420 bits (1080), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 195/440 (44%), Positives = 285/440 (64%)

Query: 345 NSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQ 404
           N  VLTA+ + YSR+  +E AR +FD+  EK L  W+AMI+GY ++   +EA++LF EMQ
Sbjct: 13  NLVVLTAMISGYSRVGRVEDARLIFDQMEEKDLVCWSAMISGYAESDKPQEALNLFSEMQ 72

Query: 405 ASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIV 464
              + P+ VT+ S++SACA+LG +   KW+H  V        + V+ ALIDMYAKCGN+ 
Sbjct: 73  VFGIKPDQVTILSVISACARLGVLDRAKWIHMYVDKNGLGGALPVNNALIDMYAKCGNLG 132

Query: 465 EARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACS 524
            AR +F+ M  ++ ++W +MI+ + +HG    AL+ F +M    I+P+GVTF+ VLYACS
Sbjct: 133 AARGVFEKMQSRNVISWTSMINAFAIHGDASNALKFFYQMKDENIKPNGVTFVGVLYACS 192

Query: 525 HAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVW 584
           HAGLV EG   F SM ++H   P  EHY CMVD+ GRA  L  ALE ++ + + P   +W
Sbjct: 193 HAGLVEEGRRTFASMTNEHNITPKHEHYGCMVDLFGRANLLRDALELVETMPLAPNVVIW 252

Query: 585 GALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKR 644
           G+L+ AC IH +  L   A++++ EL+P++ G  V LSNIY+ +R +     +R ++K+R
Sbjct: 253 GSLMAACQIHGENELGEFAAKQVLELEPDHDGALVQLSNIYAKDRRWQDVGELRNLMKQR 312

Query: 645 KLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDV 704
            ++K  GC+ IE+    + F   D+ H Q+  IY  L+++  +++  G+   T + L DV
Sbjct: 313 GISKERGCSRIELNNQVYEFVMADKKHKQADKIYEKLDEVVKELKLVGYTPNTRSVLVDV 372

Query: 705 EEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVV 764
           EEE K+ ++  HSEKLA+ +GL+    G+ IRI+KNLRVC DCHT  K +SKV G  I+V
Sbjct: 373 EEEGKKEVVLWHSEKLALCYGLMGEGKGSCIRIVKNLRVCEDCHTFIKLVSKVYGMEIIV 432

Query: 765 RDANRFHHFKGGVCSCGDYW 784
           RD  RFHH+K GVCSC DYW
Sbjct: 433 RDRTRFHHYKAGVCSCNDYW 452



 Score =  115 bits (288), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 68/251 (27%), Positives = 124/251 (49%), Gaps = 2/251 (0%)

Query: 244 HVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLL 303
           ++ VLT ++S YS+ G VE A L+F  +   DL+  +AMISGY  + K + +L LF ++ 
Sbjct: 13  NLVVLTAMISGYSRVGRVEDARLIFDQMEEKDLVCWSAMISGYAESDKPQEALNLFSEMQ 72

Query: 304 ASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEME 363
               + +  TI+ +I      G L     IH +  K+G+     V  AL  +Y++   + 
Sbjct: 73  VFGIKPDQVTILSVISACARLGVLDRAKWIHMYVDKNGLGGALPVNNALIDMYAKCGNLG 132

Query: 364 AARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACA 423
           AAR +F++   +++ SW +MI  +  +G    A+  F +M+   + PN VT   +L AC+
Sbjct: 133 AARGVFEKMQSRNVISWTSMINAFAIHGDASNALKFFYQMKDENIKPNGVTFVGVLYACS 192

Query: 424 QLGAISLGKWVH-ELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVT-W 481
             G +  G+     +    N          ++D++ +   + +A EL + M     V  W
Sbjct: 193 HAGLVEEGRRTFASMTNEHNITPKHEHYGCMVDLFGRANLLRDALELVETMPLAPNVVIW 252

Query: 482 NTMISGYGLHG 492
            ++++   +HG
Sbjct: 253 GSLMAACQIHG 263



 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 84/335 (25%), Positives = 149/335 (44%), Gaps = 35/335 (10%)

Query: 142 DLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMV 201
           +L V  A++  Y +   V+ AR +FD+M EKD V W++MISG  ++   Q+++ +F +M 
Sbjct: 13  NLVVLTAMISGYSRVGRVEDARLIFDQMEEKDLVCWSAMISGYAESDKPQEALNLFSEM- 71

Query: 202 RNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEV 261
           +  G   D  ++ +V+ A A +  L     I     K G    + V   L+  Y+KCG +
Sbjct: 72  QVFGIKPDQVTILSVISACARLGVLDRAKWIHMYVDKNGLGGALPVNNALIDMYAKCGNL 131

Query: 262 ERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVF 321
             A  +F  +   ++IS  +MI+ +  +G   ++L+ F Q+     + N  T VG+    
Sbjct: 132 GAARGVFEKMQSRNVISWTSMINAFAIHGDASNALKFFYQMKDENIKPNGVTFVGV---- 187

Query: 322 YPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWN 381
                  L  C H+  ++ G            T  S  NE     K            + 
Sbjct: 188 -------LYACSHAGLVEEG----------RRTFASMTNEHNITPK---------HEHYG 221

Query: 382 AMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSR 441
            M+  + +  L  +A+ L + M    +APN V   S+++AC   G   LG++  + V   
Sbjct: 222 CMVDLFGRANLLRDALELVETM---PLAPNVVIWGSLMAACQIHGENELGEFAAKQVLEL 278

Query: 442 NFESNIYVSTALIDMYAKCGNIVEARELFDLMSHK 476
             + +  +   L ++YAK     +  EL +LM  +
Sbjct: 279 EPDHDGAL-VQLSNIYAKDRRWQDVGELRNLMKQR 312



 Score = 65.9 bits (159), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 39/130 (30%), Positives = 71/130 (54%), Gaps = 11/130 (8%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           AR +F  + + DL  ++ +I G++ ++ P+ ++  ++ ++    + PD  T   +LS  S
Sbjct: 33  ARLIFDQMEEKDLVCWSAMISGYAESDKPQEALNLFSEMQV-FGIKPDQVT---ILSVIS 88

Query: 120 ACCDRSIGVL-----LHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDT 174
           AC    +GVL     +H +   +G G  L V  AL+D+Y K   + +AR VF+KM  ++ 
Sbjct: 89  ACA--RLGVLDRAKWIHMYVDKNGLGGALPVNNALIDMYAKCGNLGAARGVFEKMQSRNV 146

Query: 175 VLWNSMISGL 184
           + W SMI+  
Sbjct: 147 ISWTSMINAF 156


>gi|302797883|ref|XP_002980702.1| hypothetical protein SELMODRAFT_113181 [Selaginella moellendorffii]
 gi|300151708|gb|EFJ18353.1| hypothetical protein SELMODRAFT_113181 [Selaginella moellendorffii]
          Length = 1108

 Score =  420 bits (1080), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 256/743 (34%), Positives = 385/743 (51%), Gaps = 31/743 (4%)

Query: 59   YARALFFSIP---------KPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNF 109
            YA+  FFS           K D+  +N ++ G S +      +    H      + P+  
Sbjct: 380  YAKCGFFSAAWTVFRRIRWKCDVISWNTML-GASEDRKSFGKVVNTFHHMLLAGIDPNKV 438

Query: 110  TYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLF---VGAALVDLYFKFSWVKSARKVF 166
            ++  +L+A S       G  +H  +++     D     V   LV +Y K   +  A  VF
Sbjct: 439  SFIAILNACSNSEALDFGRKIH--SLILTRRRDYVESSVATMLVSMYGKCGSIAEAELVF 496

Query: 167  DKMP--EKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAV---A 221
             +MP   +  V WN M+    +N   +++     +M++ GG   D+ S  +VL +     
Sbjct: 497  KEMPLPSRSLVTWNVMLGAYAQNDRSKEAFGALMEMLQ-GGVLPDALSFTSVLSSCYCSQ 555

Query: 222  EVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNA 281
            E Q LR+     C+ L+ G+     + T L+S + +C E+E+A  +F ++   D++S  A
Sbjct: 556  EAQVLRM-----CI-LESGYRSAC-LETALISMHGRCRELEQARSVFDEMDHGDVVSWTA 608

Query: 282  MISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSG 341
            M+S    N   +    LFR++       +  T+   +        L L   IH+   + G
Sbjct: 609  MVSATAENRDFKEVHHLFRRMQLEGVIPDKFTLATTLDTCLDSTTLGLGKIIHACVTEIG 668

Query: 342  IVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQ 401
            + ++ +V  AL  +YS   +   A   F+    + L SWN M A Y Q GL +EA+ LF+
Sbjct: 669  LEADIAVENALLNMYSNCGDWREALSFFETMKARDLVSWNIMSAAYAQAGLAKEAVLLFR 728

Query: 402  EMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCG 461
             MQ   V P+ +T S+ L+       +S GK  H L      +S++ V+T L+ +YAKCG
Sbjct: 729  HMQLEGVKPDKLTFSTTLNVSGGSALVSDGKLFHGLAAESGLDSDVSVATGLVKLYAKCG 788

Query: 462  NIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLY 521
             + EA  LF      + V  N +I     HG   EA+++F +M   G+RP   T +S++ 
Sbjct: 789  KLDEAISLFRGACQWTVVLLNAIIGALAQHGFSEEAVKMFWKMQQEGVRPDVATLVSIIS 848

Query: 522  ACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGP 581
            AC HAG+V EG   F +M    G  P  EHYAC VD+LGRAGQLE A + I+ +  E   
Sbjct: 849  ACGHAGMVEEGCSSFLTMKEYFGISPTLEHYACFVDLLGRAGQLEHAEQIIRKMPFEDNT 908

Query: 582  AVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVV 641
             VW +LLG C +  D  L    ++++ ELDP N   HV+LSNIY A   +  A   R+ +
Sbjct: 909  LVWTSLLGTCKLQGDAELGERCAQRILELDPHNSAAHVVLSNIYCATGKWKDADVDRKKL 968

Query: 642  KKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTAL 701
              + +  APG + +E+G   H F +GD+ HPQ+  IY +L+KL   MR AG++ +     
Sbjct: 969  LDQNVKNAPGMSWLEIGKQVHEFVAGDRSHPQTDEIYVVLDKLELLMRRAGYEADKGL-- 1026

Query: 702  HDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRV 761
             D E+E KE  +  HSE++AIAFGLIAT P T ++I+KNLRVC DCHTATK+IS + GR 
Sbjct: 1027 -DAEDELKEKALGYHSERIAIAFGLIATPPDTTLKIVKNLRVCGDCHTATKYISMIMGRE 1085

Query: 762  IVVRDANRFHHFKGGVCSCGDYW 784
            I+VRD+ RFHHF  G CSC D W
Sbjct: 1086 IIVRDSLRFHHFSNGTCSCKDCW 1108



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 137/535 (25%), Positives = 248/535 (46%), Gaps = 24/535 (4%)

Query: 111 YSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMP 170
           Y+ +L +     D + G   H     +G    LF+G  L+++Y +   ++ A  +F KM 
Sbjct: 28  YTALLQSCVDSNDLAKGKRAHELIANAGLEQHLFLGNCLINMYVRCGSLEEAHAIFSKME 87

Query: 171 EKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGM 230
           E++ V W ++IS   ++  F  +  +F  M+       +S ++ A+L A A  ++L +G 
Sbjct: 88  ERNVVSWTALISANAQSGAFARAFALFRTMLLESSAAPNSYTLVAMLNACANSRDLAIGR 147

Query: 231 EIQCLGLKLGFHDHVYVLT----GLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGY 286
            I  +  +LG        T     +++ Y+KCG  E A  +F  I   D++S  AM   Y
Sbjct: 148 SIHAMIWELGLERESTTATLVGNAMINMYAKCGSPEDAIAVFLTIPEKDVVSWTAMAGAY 207

Query: 287 TCNGK-TESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSN 345
               +    +LR+FR++L      N   ++  I        L     +HS   ++G+  +
Sbjct: 208 AQERRFYPDALRIFREMLLQPLAPN---VITFITALGACTSLRDGTWLHSLLHEAGLGFD 264

Query: 346 SSVLTALSTVYSRLNEMEAARKLFD---ESSEKSLASWNAMIAGYTQNGLTEEAISLFQE 402
                AL  +Y +  + E A  +F       E  L SWNAMI+   + G   +A+++F+ 
Sbjct: 265 PLAGNALINMYGKCGDWEGAYGVFKAMASRQELDLVSWNAMISASVEAGRHGDAMAIFRR 324

Query: 403 MQASKVAPNPVTVSSILSACAQLGA-ISLGKWVHELVKSRNFESNIYVSTALIDMYAKCG 461
           ++   + PN VT+ +IL+A A  G      +  H  +    +  ++ V  A+I MYAKCG
Sbjct: 325 LRLEGMRPNSVTLITILNALAASGVDFGAARKFHGRIWESGYLRDVVVGNAIISMYAKCG 384

Query: 462 NIVEARELFDLMSHKSEV-TWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVL 520
               A  +F  +  K +V +WNTM+          + +  F  ML +GI P+ V+F+++L
Sbjct: 385 FFSAAWTVFRRIRWKCDVISWNTMLGASEDRKSFGKVVNTFHHMLLAGIDPNKVSFIAIL 444

Query: 521 YACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACM-VDILGRAGQLEKALEFIKGLAVEP 579
            ACS++  +  G +I  S+I       +    A M V + G+ G + +A    K + +  
Sbjct: 445 NACSNSEALDFGRKI-HSLILTRRRDYVESSVATMLVSMYGKCGSIAEAELVFKEMPLPS 503

Query: 580 GPAV-WGALLGACMIHKDTNLARVASEKLFEL-----DPENVGYHVLLSNIYSAE 628
              V W  +LGA   +   + ++ A   L E+      P+ + +  +LS+ Y ++
Sbjct: 504 RSLVTWNVMLGA---YAQNDRSKEAFGALMEMLQGGVLPDALSFTSVLSSCYCSQ 555



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 116/462 (25%), Positives = 200/462 (43%), Gaps = 34/462 (7%)

Query: 209 DSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLF 268
           D     A+L +  +  +L  G     L    G   H+++   L++ Y +CG +E A  +F
Sbjct: 24  DLQEYTALLQSCVDSNDLAKGKRAHELIANAGLEQHLFLGNCLINMYVRCGSLEEAHAIF 83

Query: 269 RDIVRPDLISCNAMISGYTCNGKTESSLRLFR-QLLASAERVNSSTIVGLIPVFYPFGHL 327
             +   +++S  A+IS    +G    +  LFR  LL S+   NS T+V ++        L
Sbjct: 84  SKMEERNVVSWTALISANAQSGAFARAFALFRTMLLESSAAPNSYTLVAMLNACANSRDL 143

Query: 328 HLTNCIHSFCLKSGIVSNSSVLT----ALSTVYSRLNEMEAARKLFDESSEKSLASWNAM 383
            +   IH+   + G+   S+  T    A+  +Y++    E A  +F    EK + SW AM
Sbjct: 144 AIGRSIHAMIWELGLERESTTATLVGNAMINMYAKCGSPEDAIAVFLTIPEKDVVSWTAM 203

Query: 384 IAGYTQ-NGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRN 442
              Y Q      +A+ +F+EM    +APN +T  + L AC  L     G W+H L+    
Sbjct: 204 AGAYAQERRFYPDALRIFREMLLQPLAPNVITFITALGACTSLRD---GTWLHSLLHEAG 260

Query: 443 FESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSE---VTWNTMISGYGLHGHGLEALQ 499
              +     ALI+MY KCG+   A  +F  M+ + E   V+WN MIS     G   +A+ 
Sbjct: 261 LGFDPLAGNALINMYGKCGDWEGAYGVFKAMASRQELDLVSWNAMISASVEAGRHGDAMA 320

Query: 500 LFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDIL 559
           +F  +   G+RP+ VT +++L A + +G+       F   I + G+         ++ + 
Sbjct: 321 IFRRLRLEGMRPNSVTLITILNALAASGVDFGAARKFHGRIWESGYLRDVVVGNAIISMY 380

Query: 560 GRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASE----KLFELDPENV 615
            + G    A    + +  +     W  +LGA    K  +  +V +      L  +DP  V
Sbjct: 381 AKCGFFSAAWTVFRRIRWKCDVISWNTMLGASEDRK--SFGKVVNTFHHMLLAGIDPNKV 438

Query: 616 GYHVLL----------------SNIYSAERDYLQAATVRQVV 641
            +  +L                S I +  RDY++++    +V
Sbjct: 439 SFIAILNACSNSEALDFGRKIHSLILTRRRDYVESSVATMLV 480


>gi|449457516|ref|XP_004146494.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g44230-like [Cucumis sativus]
          Length = 650

 Score =  420 bits (1079), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 222/590 (37%), Positives = 348/590 (58%), Gaps = 47/590 (7%)

Query: 237 LKLGFHDHVYVLTGLVSFYSKCGEVERAE---LLFRDIVRPDLISCNAMISGYTCNGKTE 293
           ++ G     YVLT L+   +K  +V       L+F  +  P+     AMI GY   G   
Sbjct: 66  IRNGLSQCSYVLTKLIRMLTKV-DVPMGSYPLLVFGQVNYPNPFLWTAMIRGYALQGLLS 124

Query: 294 SSLRLFRQL------------------------LASAERVNSSTIVGLIPVFYPFGHLHL 329
            S   + ++                        +   ++V++ TI  LI  F     L++
Sbjct: 125 ESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLGKQVHAQTI--LIGGFA--SDLYV 180

Query: 330 TNCIHSFCLKSGIV----------SNSSVL--TALSTVYSRLNEMEAARKLFDESSEKSL 377
            N +    +K G +          S   V+  T L   Y++  +ME+A  LFD+   K +
Sbjct: 181 GNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGDMESASGLFDDLPLKDM 240

Query: 378 ASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHEL 437
            +W AM+ GY QNG  +EA+  FQ+MQ   +  + VT++ ++SACAQLGA+    W+ ++
Sbjct: 241 VAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISACAQLGAVKHANWIRDI 300

Query: 438 VKSRNF--ESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGL 495
            +   F    N+ V +ALIDMY+KCG+  EA ++F++M  ++  ++++MI GY +HG   
Sbjct: 301 AERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKERNVFSYSSMILGYAMHGRAH 360

Query: 496 EALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACM 555
            ALQLF +ML + IRP+ VTF+ +L ACSHAGLV +G ++F  M    G  P  +HYACM
Sbjct: 361 SALQLFHDMLKTEIRPNKVTFIGILSACSHAGLVEQGRQLFAKMEKFFGVAPSPDHYACM 420

Query: 556 VDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENV 615
           VD+LGRAG LE+AL+ +K + +EP   VWGALLGAC IH + ++A++A+ +LF+L+P  +
Sbjct: 421 VDLLGRAGCLEEALDLVKTMPMEPNGGVWGALLGACRIHGNPDIAQIAANELFKLEPNGI 480

Query: 616 GYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIE-VGGTPHVFTSGDQLHPQS 674
           G ++LLSNIY++   + + + +R+V++++   K PGC+  E   G  H F +GD  HP+S
Sbjct: 481 GNYILLSNIYASAGRWEEVSKLRKVIREKGFKKNPGCSWFEGKNGEIHDFFAGDTTHPRS 540

Query: 675 TAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTE 734
           + I   L++L  ++R  G++    +A +D+ ++EKE ++  HSEKLA+A+GL+ TE G  
Sbjct: 541 SEIRQALKQLIERLRSHGYKPNLGSAPYDLTDDEKERILMSHSEKLALAYGLLCTEAGDT 600

Query: 735 IRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           I+I+KN+R+C DCH      S++TGR I+VRD  RFHHF  G CSCG++W
Sbjct: 601 IKIMKNIRICEDCHNVMCAASEITGREIIVRDNMRFHHFHNGTCSCGNFW 650



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 132/500 (26%), Positives = 224/500 (44%), Gaps = 79/500 (15%)

Query: 12  FLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLS--DFKATCYARALFFSIPK 69
            +S+L      SQ+ Q HA II +G       +TKL   L+  D     Y   +F  +  
Sbjct: 45  LMSILHDCTLFSQIKQVHAHIIRNGLSQCSYVLTKLIRMLTKVDVPMGSYPLLVFGQVNY 104

Query: 70  PDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVL 129
           P+ FL+  +IRG++   +   S  FYT +R++  + P +FT+S +  A  A  +  +G  
Sbjct: 105 PNPFLWTAMIRGYALQGLLSESTNFYTRMRRD-GVGPVSFTFSALFKACGAALNMDLGKQ 163

Query: 130 LHGHAI-VSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKM------------------- 169
           +H   I + G+ SDL+VG +++DLY K  ++  ARKVFD+M                   
Sbjct: 164 VHAQTILIGGFASDLYVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYG 223

Query: 170 ------------PEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVL 217
                       P KD V W +M++G  +N   ++++  F  M ++ G   D  ++A V+
Sbjct: 224 DMESASGLFDDLPLKDMVAWTAMVTGYAQNGRPKEALEYFQKM-QDVGMETDEVTLAGVI 282

Query: 218 PAVAEVQELRLGMEIQCLGLKLGF--HDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPD 275
            A A++  ++    I+ +  + GF    +V V + L+  YSKCG  + A  +F  +   +
Sbjct: 283 SACAQLGAVKHANWIRDIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKERN 342

Query: 276 LISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHS 335
           + S ++MI GY  +G+  S+L+LF  +L +  R N  T +G++                S
Sbjct: 343 VFSYSSMILGYAMHGRAHSALQLFHDMLKTEIRPNKVTFIGIL----------------S 386

Query: 336 FCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEE 395
            C  +G+V     L A         +ME   K F  +   S   +  M+    + G  EE
Sbjct: 387 ACSHAGLVEQGRQLFA---------KME---KFFGVAP--SPDHYACMVDLLGRAGCLEE 432

Query: 396 AISLFQEMQASKVAPNPVTVSSILSAC--------AQLGAISLGKWVHELVKSRNFESNI 447
           A+ L + M    + PN     ++L AC        AQ+ A  L K     + +    SNI
Sbjct: 433 ALDLVKTM---PMEPNGGVWGALLGACRIHGNPDIAQIAANELFKLEPNGIGNYILLSNI 489

Query: 448 YVSTALIDMYAKCGNIVEAR 467
           Y S    +  +K   ++  +
Sbjct: 490 YASAGRWEEVSKLRKVIREK 509



 Score =  106 bits (264), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 73/272 (26%), Positives = 124/272 (45%), Gaps = 37/272 (13%)

Query: 333 IHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKL--FDESSEKSLASWNAMIAGYTQN 390
           +H+  +++G+   S VLT L  + ++++    +  L  F + +  +   W AMI GY   
Sbjct: 61  VHAHIIRNGLSQCSYVLTKLIRMLTKVDVPMGSYPLLVFGQVNYPNPFLWTAMIRGYALQ 120

Query: 391 GLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVH-ELVKSRNFESNIYV 449
           GL  E+ + +  M+   V P   T S++  AC     + LGK VH + +    F S++YV
Sbjct: 121 GLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLGKQVHAQTILIGGFASDLYV 180

Query: 450 STALIDMYAKCGNIVEARELFDLMSH-------------------------------KSE 478
             ++ID+Y KCG +  AR++FD MS                                K  
Sbjct: 181 GNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGDMESASGLFDDLPLKDM 240

Query: 479 VTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQS 538
           V W  M++GY  +G   EAL+ F +M   G+    VT   V+ AC+  G V+  + I + 
Sbjct: 241 VAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISACAQLGAVKHANWI-RD 299

Query: 539 MIHDHGFKPLAEHY--ACMVDILGRAGQLEKA 568
           +    GF P       + ++D+  + G  ++A
Sbjct: 300 IAERSGFGPSGNVVVGSALIDMYSKCGSPDEA 331


>gi|115441047|ref|NP_001044803.1| Os01g0848300 [Oryza sativa Japonica Group]
 gi|15408890|dbj|BAB64281.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|113534334|dbj|BAF06717.1| Os01g0848300 [Oryza sativa Japonica Group]
 gi|125572632|gb|EAZ14147.1| hypothetical protein OsJ_04076 [Oryza sativa Japonica Group]
          Length = 660

 Score =  420 bits (1079), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 214/459 (46%), Positives = 303/459 (66%), Gaps = 4/459 (0%)

Query: 329 LTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYT 388
           L   IH+  ++ G   ++ V T L   Y++L  +  A  +F    E+++ SW AMI  Y 
Sbjct: 203 LVREIHAHAVRRGYGLHTHVATTLIDCYAKLGIVSYAESVFATMPERNVVSWTAMIGCYA 262

Query: 389 QNGLTEEAISLFQEMQASK--VAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESN 446
           +N    +AI LFQEM AS   + PN VT+  IL A A + A+  GK +H  +  R F+S 
Sbjct: 263 KNERPGDAILLFQEMVASDEDLVPNSVTIVCILHAFAGVNALGQGKLLHAYILRRGFDSL 322

Query: 447 IYVSTALIDMYAKCGNIVEARELFDLMSHKSEV-TWNTMISGYGLHGHGLEALQLFSEML 505
           + V  AL+ MY KCG +   R +FDL+ H+ +V +WNT+ISGYG+HG G EA+Q+F +M 
Sbjct: 323 VSVLNALMAMYMKCGCLEAGRHIFDLIGHRKDVVSWNTLISGYGMHGFGHEAVQVFEDMT 382

Query: 506 HSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQL 565
             G+ P+ +TF+SVL ACSHAGLV EG  +F+SM+ D+   P AEHYACMVD+LGRAG L
Sbjct: 383 QMGVSPNIITFISVLGACSHAGLVDEGKRLFESMV-DYNVTPRAEHYACMVDLLGRAGHL 441

Query: 566 EKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIY 625
           ++A+E I+G+ + P P VWG+LLGAC IH+    A +A  +LF+L+P N G +VLL++IY
Sbjct: 442 DEAVELIQGMHIRPSPQVWGSLLGACRIHRHVEYAEMACSQLFDLEPRNAGNYVLLADIY 501

Query: 626 SAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLN 685
           +  + + +   ++ ++++  L K PGC+ IEV    H+F S D  +PQ   + A++ +  
Sbjct: 502 ARAKLHSEVGVLKDLLEEHALEKVPGCSWIEVKKRLHMFVSVDNKNPQIEELQALIGEFV 561

Query: 686 GKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCL 745
            +M+  G+  +T   L+D+EEEEKE ++  HSEKLA+AFGLI T  G  IRI KNLR+C 
Sbjct: 562 TQMKNDGYVPDTGAVLYDIEEEEKEKILLGHSEKLAVAFGLINTGRGEVIRITKNLRLCE 621

Query: 746 DCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           DCH+ TKFISK   R I+VRD NRFHHF+ G+CSCGDYW
Sbjct: 622 DCHSVTKFISKYAEREIIVRDVNRFHHFRDGICSCGDYW 660



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 100/394 (25%), Positives = 171/394 (43%), Gaps = 44/394 (11%)

Query: 37  FQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYT 96
           F++D    T+L    +       AR +F   P   +F++N +++  +  +  + ++    
Sbjct: 110 FRSDPFLSTRLIDAYASLGELPAARQVFDEAPVKSIFVWNALLKALALADHGEEALARLA 169

Query: 97  HLRKNTALTPDNFTYSFVLSAASACCDRSIGVL-----LHGHAIVSGYGSDLFVGAALVD 151
            + +   +  D+++Y+  L A  A     +        +H HA+  GYG    V   L+D
Sbjct: 170 DMGR-LRVPVDSYSYAHGLKACIAASTSHVPASALVREIHAHAVRRGYGLHTHVATTLID 228

Query: 152 LYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWL-DS 210
            Y K   V  A  VF  MPE++ V W +MI    KN    D+I +F +MV +    + +S
Sbjct: 229 CYAKLGIVSYAESVFATMPERNVVSWTAMIGCYAKNERPGDAILLFQEMVASDEDLVPNS 288

Query: 211 TSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRD 270
            ++  +L A A V  L  G  +    L+ GF   V VL  L++ Y KCG +E    +F D
Sbjct: 289 VTIVCILHAFAGVNALGQGKLLHAYILRRGFDSLVSVLNALMAMYMKCGCLEAGRHIF-D 347

Query: 271 IV--RPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLH 328
           ++  R D++S N +ISGY  +G    ++++F  +          T +G+ P    F  + 
Sbjct: 348 LIGHRKDVVSWNTLISGYGMHGFGHEAVQVFEDM----------TQMGVSPNIITFISV- 396

Query: 329 LTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYT 388
           L  C H+  +  G                RL E      + D +       +  M+    
Sbjct: 397 LGACSHAGLVDEG---------------KRLFE-----SMVDYNVTPRAEHYACMVDLLG 436

Query: 389 QNGLTEEAISLFQEMQASKVAPNPVTVSSILSAC 422
           + G  +EA+ L Q M    + P+P    S+L AC
Sbjct: 437 RAGHLDEAVELIQGMH---IRPSPQVWGSLLGAC 467



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 46/182 (25%), Positives = 88/182 (48%), Gaps = 2/182 (1%)

Query: 25  LTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSN 84
           + + HA  +  G+       T L    +      YA ++F ++P+ ++  +  +I  ++ 
Sbjct: 204 VREIHAHAVRRGYGLHTHVATTLIDCYAKLGIVSYAESVFATMPERNVVSWTAMIGCYAK 263

Query: 85  NEMPKSSICFYTHL-RKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDL 143
           NE P  +I  +  +   +  L P++ T   +L A +       G LLH + +  G+ S +
Sbjct: 264 NERPGDAILLFQEMVASDEDLVPNSVTIVCILHAFAGVNALGQGKLLHAYILRRGFDSLV 323

Query: 144 FVGAALVDLYFKFSWVKSARKVFDKMP-EKDTVLWNSMISGLMKNCCFQDSIWVFGDMVR 202
            V  AL+ +Y K   +++ R +FD +   KD V WN++ISG   +    +++ VF DM +
Sbjct: 324 SVLNALMAMYMKCGCLEAGRHIFDLIGHRKDVVSWNTLISGYGMHGFGHEAVQVFEDMTQ 383

Query: 203 NG 204
            G
Sbjct: 384 MG 385



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 63/237 (26%), Positives = 98/237 (41%), Gaps = 10/237 (4%)

Query: 358 RLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSS 417
           R++       L  +      A+ N ++     +G    A +L Q +     AP   T  S
Sbjct: 28  RVSRSRCVASLASQPPTPPPANANHLVQTLCASGRLARAAALLQGLP----APTQRTYKS 83

Query: 418 ILSACAQLGAISLGKWVHELVKSRN-FESNIYVSTALIDMYAKCGNIVEARELFDLMSHK 476
           +L A A+ G  +L   VH  +K+   F S+ ++ST LID YA  G +  AR++FD    K
Sbjct: 84  VLLAAARAGDAALAAAVHRRLKADPVFRSDPFLSTRLIDAYASLGELPAARQVFDEAPVK 143

Query: 477 SEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIF 536
           S   WN ++    L  HG EAL   ++M    +     ++   L AC  A          
Sbjct: 144 SIFVWNALLKALALADHGEEALARLADMGRLRVPVDSYSYAHGLKACIAASTSHVPASAL 203

Query: 537 QSMIHDHGFKP---LAEHYA-CMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLG 589
              IH H  +    L  H A  ++D   + G +  A E +     E     W A++G
Sbjct: 204 VREIHAHAVRRGYGLHTHVATTLIDCYAKLGIVSYA-ESVFATMPERNVVSWTAMIG 259


>gi|413947864|gb|AFW80513.1| hypothetical protein ZEAMMB73_142876 [Zea mays]
          Length = 582

 Score =  420 bits (1079), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 201/448 (44%), Positives = 279/448 (62%), Gaps = 1/448 (0%)

Query: 338 LKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAI 397
           L++    ++S    L T Y+R   +  AR LFDE   ++  SW+AM+ GY Q G   EA+
Sbjct: 135 LRTAAAVDASTFNTLITAYARAGRLADARALFDEMPARNAVSWSAMVNGYVQAGDGREAL 194

Query: 398 SLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMY 457
            +F  MQA  V P+   +  +L+ACAQ GA+  GKWVH  +K+   + N++  TAL+DMY
Sbjct: 195 RIFARMQAEDVRPDDTVLVGVLAACAQHGALEQGKWVHGYLKAHGIKINLFFGTALVDMY 254

Query: 458 AKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFL 517
           +KCG +  A ++F+ M +K+ + W TMI G  +HG G EA+ LF++M  SGIRP  + F+
Sbjct: 255 SKCGEVQLAMDVFERMQYKNVLAWTTMIKGLAMHGRGSEAVMLFAQMESSGIRPDDIAFI 314

Query: 518 SVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAV 577
            VL AC+HAGLV +G E+F SM+  +G KP  EHY CMVD+L R G L +A E I+ + +
Sbjct: 315 GVLCACTHAGLVDKGRELFDSMVRKYGIKPKIEHYGCMVDLLARNGFLYEAKEMIQKMPM 374

Query: 578 EPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATV 637
           EP   +WGAL+  C  HK+   A   ++    L+P+  G +VLLSNIY+A   +  A  +
Sbjct: 375 EPDALIWGALMAGCRFHKNVEFAEYVAKHWILLEPDKSGAYVLLSNIYAASGRHASAREI 434

Query: 638 RQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMR-EAGFQTE 696
           R +++++ + K PGC+ +EV G  H F  GD  HP+   I +   +++ ++R E G+  +
Sbjct: 435 RHLMREKGVDKTPGCSTVEVNGVIHQFIVGDLSHPRIKDILSKWYEIDTRIRLEEGYIPD 494

Query: 697 TVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISK 756
               L D+EEEEKE  +  HSEKLAIAF LI+      IRI KNLRVC DCH  TK ISK
Sbjct: 495 MKEVLLDIEEEEKEGALSRHSEKLAIAFALISISDNMPIRIFKNLRVCHDCHHVTKLISK 554

Query: 757 VTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           V GR IVVRD  RFH FK G CSC DYW
Sbjct: 555 VYGREIVVRDRTRFHLFKEGTCSCKDYW 582



 Score =  115 bits (289), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 63/243 (25%), Positives = 124/243 (51%), Gaps = 2/243 (0%)

Query: 251 LVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVN 310
           L++ Y++ G +  A  LF ++   + +S +AM++GY   G    +LR+F ++ A   R +
Sbjct: 149 LITAYARAGRLADARALFDEMPARNAVSWSAMVNGYVQAGDGREALRIFARMQAEDVRPD 208

Query: 311 SSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFD 370
            + +VG++      G L     +H +    GI  N    TAL  +YS+  E++ A  +F+
Sbjct: 209 DTVLVGVLAACAQHGALEQGKWVHGYLKAHGIKINLFFGTALVDMYSKCGEVQLAMDVFE 268

Query: 371 ESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISL 430
               K++ +W  MI G   +G   EA+ LF +M++S + P+ +    +L AC   G +  
Sbjct: 269 RMQYKNVLAWTTMIKGLAMHGRGSEAVMLFAQMESSGIRPDDIAFIGVLCACTHAGLVDK 328

Query: 431 GKWVHE-LVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSE-VTWNTMISGY 488
           G+ + + +V+    +  I     ++D+ A+ G + EA+E+   M  + + + W  +++G 
Sbjct: 329 GRELFDSMVRKYGIKPKIEHYGCMVDLLARNGFLYEAKEMIQKMPMEPDALIWGALMAGC 388

Query: 489 GLH 491
             H
Sbjct: 389 RFH 391



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 98/445 (22%), Positives = 178/445 (40%), Gaps = 84/445 (18%)

Query: 74  LFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVL---L 130
           L + +IR  S +  P  ++  Y HL +   L   +   S + S A +       VL   +
Sbjct: 39  LHDALIRALSRSARPHLALPLYAHLLRAGLLPTPHTLPSLLKSMALSPAVPGAAVLALTV 98

Query: 131 HGHAIVSGYGSDLFVGAALVDL--------------------------------YFKFSW 158
           H HA+  G    + V  AL+ +                                Y +   
Sbjct: 99  HTHAVKLGLDRFVLVSNALIRVHAGFLGSLADGLLLLRTAAAVDASTFNTLITAYARAGR 158

Query: 159 VKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLP 218
           +  AR +FD+MP ++ V W++M++G ++    ++++ +F  M +      D T +  VL 
Sbjct: 159 LADARALFDEMPARNAVSWSAMVNGYVQAGDGREALRIFARM-QAEDVRPDDTVLVGVLA 217

Query: 219 AVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLIS 278
           A A+   L  G  +       G   +++  T LV  YSKCGEV+ A  +F  +   ++++
Sbjct: 218 ACAQHGALEQGKWVHGYLKAHGIKINLFFGTALVDMYSKCGEVQLAMDVFERMQYKNVLA 277

Query: 279 CNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCL 338
              MI G   +G+   ++ LF Q+ +S  R +    +G+           L  C H+  +
Sbjct: 278 WTTMIKGLAMHGRGSEAVMLFAQMESSGIRPDDIAFIGV-----------LCACTHAGLV 326

Query: 339 KSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEK-----SLASWNAMIAGYTQNGLT 393
             G                        R+LFD    K      +  +  M+    +NG  
Sbjct: 327 DKG------------------------RELFDSMVRKYGIKPKIEHYGCMVDLLARNGFL 362

Query: 394 EEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWV--HELVKSRNFESNIYVST 451
            EA  + Q+M    + P+ +   ++++ C     +   ++V  H ++   + +S  YV  
Sbjct: 363 YEAKEMIQKM---PMEPDALIWGALMAGCRFHKNVEFAEYVAKHWILLEPD-KSGAYV-- 416

Query: 452 ALIDMYAKCGNIVEARELFDLMSHK 476
            L ++YA  G    ARE+  LM  K
Sbjct: 417 LLSNIYAASGRHASAREIRHLMREK 441



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 62/249 (24%), Positives = 113/249 (45%), Gaps = 10/249 (4%)

Query: 39  NDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHL 98
           N L T    A RL+D      ARALF  +P  +   ++ ++ G+      + ++  +  +
Sbjct: 147 NTLITAYARAGRLAD------ARALFDEMPARNAVSWSAMVNGYVQAGDGREALRIFARM 200

Query: 99  RKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSW 158
           +    + PD+     VL+A +       G  +HG+    G   +LF G ALVD+Y K   
Sbjct: 201 QAED-VRPDDTVLVGVLAACAQHGALEQGKWVHGYLKAHGIKINLFFGTALVDMYSKCGE 259

Query: 159 VKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLP 218
           V+ A  VF++M  K+ + W +MI GL  +    +++ +F  M  + G   D  +   VL 
Sbjct: 260 VQLAMDVFERMQYKNVLAWTTMIKGLAMHGRGSEAVMLFAQM-ESSGIRPDDIAFIGVLC 318

Query: 219 AVAEVQELRLGMEI-QCLGLKLGFHDHVYVLTGLVSFYSKCGEV-ERAELLFRDIVRPDL 276
           A      +  G E+   +  K G    +     +V   ++ G + E  E++ +  + PD 
Sbjct: 319 ACTHAGLVDKGRELFDSMVRKYGIKPKIEHYGCMVDLLARNGFLYEAKEMIQKMPMEPDA 378

Query: 277 ISCNAMISG 285
           +   A+++G
Sbjct: 379 LIWGALMAG 387


>gi|449437930|ref|XP_004136743.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g13770, mitochondrial-like [Cucumis sativus]
          Length = 666

 Score =  420 bits (1079), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 213/571 (37%), Positives = 340/571 (59%), Gaps = 2/571 (0%)

Query: 216 VLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPD 275
           +L      + +R G  +    +K  +   VY+ T L+  Y+KC  +  A  +F ++ + +
Sbjct: 96  ILNECVSQRAIREGQRVHTHMIKTCYLPSVYLRTRLIVLYNKCDCLGDAREMFDEMPQKN 155

Query: 276 LISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHS 335
           ++S  AMIS Y+  G    +L LF ++L S    N  T   ++   Y          IHS
Sbjct: 156 VVSWTAMISAYSQRGFAFEALNLFVEMLRSDTEPNHFTFATILTSCYGSLGFETGRQIHS 215

Query: 336 FCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEE 395
             +K    S+  V ++L  +Y++   +  A  +F    E+ + +  A+I+GY Q GL EE
Sbjct: 216 IAIKRNYESHMFVGSSLLDMYAKSGRICDAHGVFHCLPERDVVACTAIISGYAQMGLDEE 275

Query: 396 AISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALID 455
           A+ LF+++Q   +  N VT +S+L+A + L A++ GK VH  V      S + +  +LID
Sbjct: 276 ALKLFRQLQIEGMNSNSVTYASVLTALSGLAALNHGKQVHSHVLRSGQYSYVVLLNSLID 335

Query: 456 MYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSG-IRPSGV 514
           MY+KCGN+  AR +FD M  ++ ++WN M+ GY  HG   E L+LF  M     ++P  +
Sbjct: 336 MYSKCGNVCYARRIFDSMPERTCISWNAMLVGYSKHGMAREVLELFKLMREENKVKPDSI 395

Query: 515 TFLSVLYACSHAGLVREGDEIFQSMIH-DHGFKPLAEHYACMVDILGRAGQLEKALEFIK 573
           T+L+VL  CSH  L   G EIF +M++   G +P   HY C+VD+LGRAG++E+A +FIK
Sbjct: 396 TYLAVLSGCSHGQLEDMGLEIFYNMVNGKDGIEPDIGHYGCVVDLLGRAGRVEEAFDFIK 455

Query: 574 GLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQ 633
            +   P  A+WG+LLG+C +H D  +  +  +KL EL+PEN G +V+LSN+Y++   +  
Sbjct: 456 KMPFVPTAAIWGSLLGSCRVHSDVEIGIIVGQKLLELEPENAGNYVILSNLYASAGKWED 515

Query: 634 AATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGF 693
              +R +++++ + K PG + +E+    H F + D  HP+   +   +++L+ K +E G+
Sbjct: 516 MRNIRDLMQEKAVTKEPGRSWVELDQIVHTFHASDHTHPRREEVAKKVKELSIKFKEDGY 575

Query: 694 QTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKF 753
             +    L+DV+EE+KE ++  HSEKLA+AFGLIAT  GT IR+IKNLR+C+DCH+  KF
Sbjct: 576 VPDLSCVLYDVDEEQKEKVLLGHSEKLALAFGLIATPEGTTIRVIKNLRICVDCHSFAKF 635

Query: 754 ISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           +S++  R +++RD NRFH+  GGVCSCGDYW
Sbjct: 636 VSRLYARTVILRDKNRFHNIVGGVCSCGDYW 666



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 103/369 (27%), Positives = 190/369 (51%), Gaps = 5/369 (1%)

Query: 127 GVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMK 186
           G  +H H I + Y   +++   L+ LY K   +  AR++FD+MP+K+ V W +MIS   +
Sbjct: 109 GQRVHTHMIKTCYLPSVYLRTRLIVLYNKCDCLGDAREMFDEMPQKNVVSWTAMISAYSQ 168

Query: 187 NCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVY 246
                +++ +F +M+R+  T  +  + A +L +         G +I  + +K  +  H++
Sbjct: 169 RGFAFEALNLFVEMLRS-DTEPNHFTFATILTSCYGSLGFETGRQIHSIAIKRNYESHMF 227

Query: 247 VLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASA 306
           V + L+  Y+K G +  A  +F  +   D+++C A+ISGY   G  E +L+LFRQL    
Sbjct: 228 VGSSLLDMYAKSGRICDAHGVFHCLPERDVVACTAIISGYAQMGLDEEALKLFRQLQIEG 287

Query: 307 ERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAAR 366
              NS T   ++        L+    +HS  L+SG  S   +L +L  +YS+   +  AR
Sbjct: 288 MNSNSVTYASVLTALSGLAALNHGKQVHSHVLRSGQYSYVVLLNSLIDMYSKCGNVCYAR 347

Query: 367 KLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEM-QASKVAPNPVTVSSILSACA-- 423
           ++FD   E++  SWNAM+ GY+++G+  E + LF+ M + +KV P+ +T  ++LS C+  
Sbjct: 348 RIFDSMPERTCISWNAMLVGYSKHGMAREVLELFKLMREENKVKPDSITYLAVLSGCSHG 407

Query: 424 QLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSH-KSEVTWN 482
           QL  + L  + + +      E +I     ++D+  + G + EA +    M    +   W 
Sbjct: 408 QLEDMGLEIFYNMVNGKDGIEPDIGHYGCVVDLLGRAGRVEEAFDFIKKMPFVPTAAIWG 467

Query: 483 TMISGYGLH 491
           +++    +H
Sbjct: 468 SLLGSCRVH 476



 Score =  117 bits (292), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 107/422 (25%), Positives = 189/422 (44%), Gaps = 42/422 (9%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSI-CFYTHLRKNTALTPDNFTYSFVLSAA 118
           AR +F  +P+ ++  +  +I  +S       ++  F   LR +T   P++FT++ +L++ 
Sbjct: 144 AREMFDEMPQKNVVSWTAMISAYSQRGFAFEALNLFVEMLRSDTE--PNHFTFATILTSC 201

Query: 119 SACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWN 178
                   G  +H  AI   Y S +FVG++L+D+Y K   +  A  VF  +PE+D V   
Sbjct: 202 YGSLGFETGRQIHSIAIKRNYESHMFVGSSLLDMYAKSGRICDAHGVFHCLPERDVVACT 261

Query: 179 SMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSV--AAVLPAVAEVQELRLGMEIQCLG 236
           ++ISG  +    ++++ +F  +   G   ++S SV  A+VL A++ +  L  G ++    
Sbjct: 262 AIISGYAQMGLDEEALKLFRQLQIEG---MNSNSVTYASVLTALSGLAALNHGKQVHSHV 318

Query: 237 LKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSL 296
           L+ G + +V +L  L+  YSKCG V  A  +F  +     IS NAM+ GY+ +G     L
Sbjct: 319 LRSGQYSYVVLLNSLIDMYSKCGNVCYARRIFDSMPERTCISWNAMLVGYSKHGMAREVL 378

Query: 297 RLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVY 356
            LF+ L+    +V   +I  L           L+ C H      G          L   Y
Sbjct: 379 ELFK-LMREENKVKPDSITYLAV---------LSGCSHGQLEDMG----------LEIFY 418

Query: 357 SRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVS 416
           + +N  +          E  +  +  ++    + G  EEA    ++M      P      
Sbjct: 419 NMVNGKDGI--------EPDIGHYGCVVDLLGRAGRVEEAFDFIKKM---PFVPTAAIWG 467

Query: 417 SILSACAQLGAISLGKWV-HELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSH 475
           S+L +C     + +G  V  +L++     +  YV   L ++YA  G   + R + DLM  
Sbjct: 468 SLLGSCRVHSDVEIGIIVGQKLLELEPENAGNYV--ILSNLYASAGKWEDMRNIRDLMQE 525

Query: 476 KS 477
           K+
Sbjct: 526 KA 527



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 43/108 (39%), Positives = 61/108 (56%)

Query: 416 SSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSH 475
            +IL+ C    AI  G+ VH  +    +  ++Y+ T LI +Y KC  + +ARE+FD M  
Sbjct: 94  DTILNECVSQRAIREGQRVHTHMIKTCYLPSVYLRTRLIVLYNKCDCLGDAREMFDEMPQ 153

Query: 476 KSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYAC 523
           K+ V+W  MIS Y   G   EAL LF EML S   P+  TF ++L +C
Sbjct: 154 KNVVSWTAMISAYSQRGFAFEALNLFVEMLRSDTEPNHFTFATILTSC 201



 Score = 82.8 bits (203), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 60/240 (25%), Positives = 111/240 (46%), Gaps = 3/240 (1%)

Query: 27  QTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNE 86
           Q H+  I   +++ +   + L    +     C A  +F  +P+ D+     II G++   
Sbjct: 212 QIHSIAIKRNYESHMFVGSSLLDMYAKSGRICDAHGVFHCLPERDVVACTAIISGYAQMG 271

Query: 87  MPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVG 146
           + + ++  +  L+    +  ++ TY+ VL+A S     + G  +H H + SG  S + + 
Sbjct: 272 LDEEALKLFRQLQIE-GMNSNSVTYASVLTALSGLAALNHGKQVHSHVLRSGQYSYVVLL 330

Query: 147 AALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGT 206
            +L+D+Y K   V  AR++FD MPE+  + WN+M+ G  K+   ++ + +F  M      
Sbjct: 331 NSLIDMYSKCGNVCYARRIFDSMPERTCISWNAMLVGYSKHGMAREVLELFKLMREENKV 390

Query: 207 WLDSTSVAAVLPAVAEVQELRLGMEI--QCLGLKLGFHDHVYVLTGLVSFYSKCGEVERA 264
             DS +  AVL   +  Q   +G+EI    +  K G    +     +V    + G VE A
Sbjct: 391 KPDSITYLAVLSGCSHGQLEDMGLEIFYNMVNGKDGIEPDIGHYGCVVDLLGRAGRVEEA 450



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 42/172 (24%), Positives = 78/172 (45%), Gaps = 3/172 (1%)

Query: 13  LSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDL 72
           L+ L G    +   Q H+ ++  G  + +  +  L    S     CYAR +F S+P+   
Sbjct: 299 LTALSGLAALNHGKQVHSHVLRSGQYSYVVLLNSLIDMYSKCGNVCYARRIFDSMPERTC 358

Query: 73  FLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHG 132
             +N ++ G+S + M +  +  +  +R+   + PD+ TY  VLS  S      +G+ +  
Sbjct: 359 ISWNAMLVGYSKHGMAREVLELFKLMREENKVKPDSITYLAVLSGCSHGQLEDMGLEIFY 418

Query: 133 HAIVSGYGSDLFVG--AALVDLYFKFSWVKSARKVFDKMPEKDT-VLWNSMI 181
           + +    G +  +G    +VDL  +   V+ A     KMP   T  +W S++
Sbjct: 419 NMVNGKDGIEPDIGHYGCVVDLLGRAGRVEEAFDFIKKMPFVPTAAIWGSLL 470


>gi|108862806|gb|ABA99524.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 1176

 Score =  419 bits (1078), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 249/742 (33%), Positives = 388/742 (52%), Gaps = 8/742 (1%)

Query: 5   TPQSRNLFLSLLKGAKTQSQLTQTHAQIIIHGFQNDL---STVTKLAHRLSDFKATCYAR 61
           TP   +  LS    A+  +Q    HAQ   HGF +++   + V  L  R   F+    A 
Sbjct: 142 TPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFR---LAE 198

Query: 62  ALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASAC 121
            +F  +P  D   FN +I G +     + ++  +  + + + L+PD  T S +L+A ++ 
Sbjct: 199 RVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEM-QFSGLSPDCVTISSLLAACASL 257

Query: 122 CDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMI 181
            D   G  LH +   +G  SD  +  +L+DLY K   V++A  +F+     + VLWN M+
Sbjct: 258 GDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLML 317

Query: 182 SGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGF 241
               +      S  +F  M +  G   +  +   +L      +E+ LG +I  L +K GF
Sbjct: 318 VAFGQINDLAKSFELFCQM-QAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGF 376

Query: 242 HDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQ 301
              +YV   L+  YSK G +E+A  +   +   D++S  +MI+GY  +   + +L  F++
Sbjct: 377 ESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKE 436

Query: 302 LLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNE 361
           +       ++  +   I        +     IH+    SG   + S+  AL  +Y+R   
Sbjct: 437 MQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGR 496

Query: 362 MEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSA 421
           +  A   F+E   K   +WN +++G+ Q+GL EEA+ +F  M  S V  N  T  S LSA
Sbjct: 497 IREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSA 556

Query: 422 CAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTW 481
            A L  I  GK +H  V          V  ALI +Y KCG+  +A+  F  MS ++EV+W
Sbjct: 557 SANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSW 616

Query: 482 NTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIH 541
           NT+I+    HG GLEAL LF +M   GI+P+ VTF+ VL ACSH GLV EG   F+SM  
Sbjct: 617 NTIITSCSQHGRGLEALDLFDQMKKEGIKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSD 676

Query: 542 DHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLAR 601
           ++G +P  +HYAC++DI GRAGQL++A +FI+ + +     VW  LL AC +HK+  +  
Sbjct: 677 EYGIRPRPDHYACVIDIFGRAGQLDRAKKFIEEMPIAADAMVWRTLLSACKVHKNIEVGE 736

Query: 602 VASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTP 661
            A++ L EL+P +   +VLLSN Y+    +     VR++++ R + K PG + IEV    
Sbjct: 737 FAAKHLLELEPHDSASYVLLSNAYAVTEKWANRDQVRKMMRDRGVRKEPGRSWIEVKNVV 796

Query: 662 HVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLA 721
           H F  GD+LHP +  IY  L  +N ++ + G++ E     HD E+E ++    VHSEKLA
Sbjct: 797 HAFFVGDRLHPLAEQIYNFLAVINDRVAKVGYKQEKYHLFHDKEQEGRDPTDLVHSEKLA 856

Query: 722 IAFGLIATEPGTEIRIIKNLRV 743
           + FGL++  P   +R+IKNLRV
Sbjct: 857 VTFGLMSLPPCMPLRVIKNLRV 878



 Score =  243 bits (620), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 150/537 (27%), Positives = 277/537 (51%), Gaps = 8/537 (1%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           AR +F  +   D   +  ++ G++ N + + ++  Y  + +   + P  +  S VLS+ +
Sbjct: 96  ARRVFEELSARDNVSWVAMLSGYAQNGLGEEALGLYRQMHR-AGVVPTPYVLSSVLSSCT 154

Query: 120 ACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNS 179
                + G L+H      G+ S++FVG A++ LY +    + A +VF  MP +DTV +N+
Sbjct: 155 KAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNT 214

Query: 180 MISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKL 239
           +ISG  +    + ++ +F +M +  G   D  +++++L A A + +L+ G ++     K 
Sbjct: 215 LISGHAQCGHGEHALEIFEEM-QFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKA 273

Query: 240 GFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLF 299
           G      +   L+  Y KCG+VE A ++F    R +++  N M+  +        S  LF
Sbjct: 274 GISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELF 333

Query: 300 RQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRL 359
            Q+ A+  R N  T   ++        + L   IHS  +K+G  S+  V   L  +YS+ 
Sbjct: 334 CQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKY 393

Query: 360 NEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSIL 419
             +E AR++ +   EK + SW +MIAGY Q+   ++A++ F+EMQ   + P+ + ++S +
Sbjct: 394 GWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAI 453

Query: 420 SACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEV 479
           S CA + A+  G  +H  +    +  ++ +  AL+++YA+CG I EA   F+ + HK E+
Sbjct: 454 SGCAGINAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEI 513

Query: 480 TWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSM 539
           TWN ++SG+   G   EAL++F  M  SG++ +  TF+S L A ++   +++G +I   +
Sbjct: 514 TWNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARV 573

Query: 540 IH-DHGFKPLAEHYACMVDILGRAGQLEKA-LEFIKGLAVEPGPAVWGALLGACMIH 594
           I   H F+   E    ++ + G+ G  E A +EF +    E     W  ++ +C  H
Sbjct: 574 IKTGHSFE--TEVGNALISLYGKCGSFEDAKMEFSE--MSERNEVSWNTIITSCSQH 626



 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 143/491 (29%), Positives = 243/491 (49%), Gaps = 6/491 (1%)

Query: 81  GFSNNEMPKSSIC-FYTHLRKNTALTPDNFTYSFVLSAASACCDR-SIGVLLHGHAIVSG 138
           GF  +E P   +  F    R++  L P +F  +  L A      R  +   +H  A+  G
Sbjct: 15  GFLAHEDPAKVLSLFADKARQHGGLGPLDF--ACALRACRGNGRRWQVVPEIHAKAVTRG 72

Query: 139 YGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFG 198
            G    VG  L+DLY K   V  AR+VF+++  +D V W +M+SG  +N   ++++ ++ 
Sbjct: 73  LGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEALGLYR 132

Query: 199 DMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKC 258
            M R  G       +++VL +  + +    G  I   G K GF   ++V   +++ Y +C
Sbjct: 133 QMHR-AGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRC 191

Query: 259 GEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLI 318
           G    AE +F D+   D ++ N +ISG+   G  E +L +F ++  S    +  TI  L+
Sbjct: 192 GSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLL 251

Query: 319 PVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLA 378
                 G L     +HS+  K+GI S+  +  +L  +Y +  ++E A  +F+ S   ++ 
Sbjct: 252 AACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVV 311

Query: 379 SWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELV 438
            WN M+  + Q     ++  LF +MQA+ + PN  T   IL  C     I LG+ +H L 
Sbjct: 312 LWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLS 371

Query: 439 KSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEAL 498
               FES++YVS  LIDMY+K G + +AR + +++  K  V+W +MI+GY  H    +AL
Sbjct: 372 VKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDAL 431

Query: 499 QLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDI 558
             F EM   GI P  +   S +  C+    +R+G +I  + I+  G+      +  +V++
Sbjct: 432 AAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQI-HARIYVSGYSGDVSIWNALVNL 490

Query: 559 LGRAGQLEKAL 569
             R G++ +A 
Sbjct: 491 YARCGRIREAF 501



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 112/399 (28%), Positives = 197/399 (49%), Gaps = 26/399 (6%)

Query: 231 EIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNG 290
           EI    +  G   +  V   L+  YSK G V  A  +F ++   D +S  AM+SGY  NG
Sbjct: 63  EIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNG 122

Query: 291 KTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNC-----------IHSFCLK 339
             E +L L+RQ+  +          G++P  Y    + L++C           IH+   K
Sbjct: 123 LGEEALGLYRQMHRA----------GVVPTPYVLSSV-LSSCTKAELFAQGRLIHAQGYK 171

Query: 340 SGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISL 399
            G  S   V  A+ T+Y R      A ++F +   +   ++N +I+G+ Q G  E A+ +
Sbjct: 172 HGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEI 231

Query: 400 FQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAK 459
           F+EMQ S ++P+ VT+SS+L+ACA LG +  G  +H  +      S+  +  +L+D+Y K
Sbjct: 232 FEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVK 291

Query: 460 CGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSV 519
           CG++  A  +F+     + V WN M+  +G      ++ +LF +M  +GIRP+  T+  +
Sbjct: 292 CGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCI 351

Query: 520 LYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEP 579
           L  C+    +  G++I  S+    GF+        ++D+  + G LEKA   ++ L  E 
Sbjct: 352 LRTCTCTREIDLGEQI-HSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLK-EK 409

Query: 580 GPAVWGALLGACMIHKDTNLARVASEKLFE--LDPENVG 616
               W +++   + H+    A  A +++ +  + P+N+G
Sbjct: 410 DVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIG 448



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 52/179 (29%), Positives = 86/179 (48%), Gaps = 14/179 (7%)

Query: 373 SEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGK 432
           + +  AS    +AG+  +    + +SLF +         P+  +  L AC   G     +
Sbjct: 2   TRRGAASLGRTLAGFLAHEDPAKVLSLFADKARQHGGLGPLDFACALRACRGNGR----R 57

Query: 433 W-----VHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISG 487
           W     +H    +R       V   LID+Y+K G ++ AR +F+ +S +  V+W  M+SG
Sbjct: 58  WQVVPEIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSG 117

Query: 488 YGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFK 546
           Y  +G G EAL L+ +M  +G+ P+     SVL +C+ A L  +G      +IH  G+K
Sbjct: 118 YAQNGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQG-----RLIHAQGYK 171


>gi|115485519|ref|NP_001067903.1| Os11g0482400 [Oryza sativa Japonica Group]
 gi|77550880|gb|ABA93677.1| PPR986-12, putative, expressed [Oryza sativa Japonica Group]
 gi|113645125|dbj|BAF28266.1| Os11g0482400 [Oryza sativa Japonica Group]
          Length = 770

 Score =  419 bits (1078), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 226/668 (33%), Positives = 372/668 (55%), Gaps = 15/668 (2%)

Query: 130 LHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCC 189
           +HGH   +G  +D+FV  +LV+ Y + S  + AR++FD MPE++ V W ++++G   N  
Sbjct: 100 VHGHMAKTGASADMFVATSLVNAYMRCSAARDARRLFDGMPERNVVTWTALVTGYTLNSQ 159

Query: 190 FQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLT 249
               + VF +M+  G  +    ++ A L A     ++ LG ++    +K G      +  
Sbjct: 160 PALGLEVFVEMLEMG-RYPSHYTLGATLNACLASCDVDLGKQVHGYAIKYGAESITSMGN 218

Query: 250 GLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGK-TESSLRLFRQLLASAER 308
            L S Y+K G ++ A   F  I   ++I+   MIS    + +  E  + LF  +L     
Sbjct: 219 SLCSLYAKLGSLDSALRAFWRIPEKNVITWTTMISACAEDEECVELGMSLFIDMLMDGVM 278

Query: 309 VNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKL 368
            N  T+  ++ +      L+L   + +F  K G  +N  V  +   +Y R  E + A +L
Sbjct: 279 PNEFTLTSVMSLCGTRLDLNLGKQVQAFSFKIGCETNLPVKNSTMYLYLRKGETDEAMRL 338

Query: 369 FDESSEKSLASWNAMIAGYTQ------NGLTE-----EAISLFQEMQASKVAPNPVTVSS 417
           F++  + S+ +WNAMI+GY Q      + L       +A+++F++++ S + P+  T SS
Sbjct: 339 FEQMEDASIITWNAMISGYAQIMDSAKDDLQARSRGFQALTIFRDLKRSVMKPDLFTFSS 398

Query: 418 ILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKS 477
           ILS C+ + A+  G+ +H       F S++ V++AL++MY KCG I +A + F  M  ++
Sbjct: 399 ILSVCSAMMALEQGEQIHAQTIKSGFLSDVVVNSALVNMYNKCGCIQDANKAFLEMPTRT 458

Query: 478 EVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQ 537
            VTW +MISGY  HG   EA+QLF EM  +G+RP+ +TF+S+L ACS+AGLV E +  F 
Sbjct: 459 FVTWTSMISGYSQHGQPQEAIQLFEEMRLAGVRPNEITFVSLLSACSYAGLVEEAEHYFD 518

Query: 538 SMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDT 597
            M  ++  +P+ +HY CM+D+  R G++E A  FIK    EP  A+W +L+  C  H + 
Sbjct: 519 MMKKEYCIEPVVDHYGCMIDMFVRLGRVEDAFSFIKRTGFEPNEAIWSSLVAGCRSHGNM 578

Query: 598 NLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEV 657
            LA  A++KL EL P+ +  ++LL N+Y +   +   A VR+++K+  +      + I +
Sbjct: 579 ELAFYAADKLLELKPKGIETYILLLNMYISTERWQDVARVRKLMKQEDVGILRDRSWITI 638

Query: 658 GGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELM--MKV 715
               + F + D+ HPQ+T +Y +LE L  K +  G++      L D E++EK     +K 
Sbjct: 639 KDKVYFFRANDRTHPQATELYQLLENLLEKAKAIGYEPYQNAELSDSEDDEKPAAGSLKH 698

Query: 716 HSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKG 775
           HSE+LA+A GL+ T PG  +R+ KN+ +C DCH++ K  S +  R I+VRD+ R H FK 
Sbjct: 699 HSERLAVALGLLQTPPGATVRVTKNITMCRDCHSSIKLFSLLENREIIVRDSKRLHKFKD 758

Query: 776 GVCSCGDY 783
           G CSCGD+
Sbjct: 759 GRCSCGDF 766



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 132/500 (26%), Positives = 242/500 (48%), Gaps = 18/500 (3%)

Query: 29  HAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNEMP 88
           H  +   G   D+   T L +      A   AR LF  +P+ ++  +  ++ G++ N  P
Sbjct: 101 HGHMAKTGASADMFVATSLVNAYMRCSAARDARRLFDGMPERNVVTWTALVTGYTLNSQP 160

Query: 89  KSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAA 148
              +  +  + +     P ++T    L+A  A CD  +G  +HG+AI  G  S   +G +
Sbjct: 161 ALGLEVFVEMLE-MGRYPSHYTLGATLNACLASCDVDLGKQVHGYAIKYGAESITSMGNS 219

Query: 149 LVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKN-CCFQDSIWVFGDMVRNGGTW 207
           L  LY K   + SA + F ++PEK+ + W +MIS   ++  C +  + +F DM+ + G  
Sbjct: 220 LCSLYAKLGSLDSALRAFWRIPEKNVITWTTMISACAEDEECVELGMSLFIDMLMD-GVM 278

Query: 208 LDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELL 267
            +  ++ +V+       +L LG ++Q    K+G   ++ V    +  Y + GE + A  L
Sbjct: 279 PNEFTLTSVMSLCGTRLDLNLGKQVQAFSFKIGCETNLPVKNSTMYLYLRKGETDEAMRL 338

Query: 268 FRDIVRPDLISCNAMISGYT-----------CNGKTESSLRLFRQLLASAERVNSSTIVG 316
           F  +    +I+ NAMISGY               +   +L +FR L  S  + +  T   
Sbjct: 339 FEQMEDASIITWNAMISGYAQIMDSAKDDLQARSRGFQALTIFRDLKRSVMKPDLFTFSS 398

Query: 317 LIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKS 376
           ++ V      L     IH+  +KSG +S+  V +AL  +Y++   ++ A K F E   ++
Sbjct: 399 ILSVCSAMMALEQGEQIHAQTIKSGFLSDVVVNSALVNMYNKCGCIQDANKAFLEMPTRT 458

Query: 377 LASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHE 436
             +W +MI+GY+Q+G  +EAI LF+EM+ + V PN +T  S+LSAC+  G +   +   +
Sbjct: 459 FVTWTSMISGYSQHGQPQEAIQLFEEMRLAGVRPNEITFVSLLSACSYAGLVEEAEHYFD 518

Query: 437 LVKSRN-FESNIYVSTALIDMYAKCGNIVEARELFDLMSHK-SEVTWNTMISGYGLHGHG 494
           ++K     E  +     +IDM+ + G + +A         + +E  W+++++G   HG+ 
Sbjct: 519 MMKKEYCIEPVVDHYGCMIDMFVRLGRVEDAFSFIKRTGFEPNEAIWSSLVAGCRSHGNM 578

Query: 495 LEALQLFSEMLHSGIRPSGV 514
             A     ++L   ++P G+
Sbjct: 579 ELAFYAADKLLE--LKPKGI 596



 Score =  103 bits (256), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 67/223 (30%), Positives = 105/223 (47%), Gaps = 1/223 (0%)

Query: 302 LLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNE 361
           +L   + V S+  V L+      G L     +H    K+G  ++  V T+L   Y R + 
Sbjct: 69  MLTEGKAVQSAMYVPLLHRCVETGSLGAARAVHGHMAKTGASADMFVATSLVNAYMRCSA 128

Query: 362 MEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSA 421
              AR+LFD   E+++ +W A++ GYT N      + +F EM      P+  T+ + L+A
Sbjct: 129 ARDARRLFDGMPERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATLNA 188

Query: 422 CAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTW 481
           C     + LGK VH        ES   +  +L  +YAK G++  A   F  +  K+ +TW
Sbjct: 189 CLASCDVDLGKQVHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPEKNVITW 248

Query: 482 NTMISGYGLHGHGLE-ALQLFSEMLHSGIRPSGVTFLSVLYAC 523
            TMIS        +E  + LF +ML  G+ P+  T  SV+  C
Sbjct: 249 TTMISACAEDEECVELGMSLFIDMLMDGVMPNEFTLTSVMSLC 291



 Score = 43.1 bits (100), Expect = 0.62,   Method: Compositional matrix adjust.
 Identities = 38/181 (20%), Positives = 74/181 (40%), Gaps = 17/181 (9%)

Query: 12  FLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPD 71
            LS+        Q  Q HAQ I  GF +D+   + L +  +       A   F  +P   
Sbjct: 399 ILSVCSAMMALEQGEQIHAQTIKSGFLSDVVVNSALVNMYNKCGCIQDANKAFLEMPTRT 458

Query: 72  LFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASAC-----CDRSI 126
              +  +I G+S +  P+ +I  +  +R    + P+  T+  +LSA S        +   
Sbjct: 459 FVTWTSMISGYSQHGQPQEAIQLFEEMRL-AGVRPNEITFVSLLSACSYAGLVEEAEHYF 517

Query: 127 GVLLHGHAI---VSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMP-EKDTVLWNSMIS 182
            ++   + I   V  YG        ++D++ +   V+ A     +   E +  +W+S+++
Sbjct: 518 DMMKKEYCIEPVVDHYG-------CMIDMFVRLGRVEDAFSFIKRTGFEPNEAIWSSLVA 570

Query: 183 G 183
           G
Sbjct: 571 G 571


>gi|297738270|emb|CBI27471.3| unnamed protein product [Vitis vinifera]
          Length = 574

 Score =  419 bits (1078), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 237/583 (40%), Positives = 342/583 (58%), Gaps = 26/583 (4%)

Query: 208 LDSTSVAA----VLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYS--KCGEV 261
           L S S AA    +L   + ++ELR   +I    LK G        + L++F +    G +
Sbjct: 12  LSSESNAAQTLHLLQRCSNMEELR---QIHGQMLKTGLILDEIPASKLLAFCASPNSGSL 68

Query: 262 ERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVF 321
             A  +F  I RP+    N MI GY+ + + E +L L+  +L  +   N+ T   L+   
Sbjct: 69  AYARTVFDRIFRPNTFMWNTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKAC 128

Query: 322 YPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWN 381
                L  T  IH+  +K G  S      +L  VYS+  ++++AR LFD+  ++      
Sbjct: 129 SSMSALEETQQIHAHIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDT---- 184

Query: 382 AMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSR 441
                        EA++LF  MQ + +  + V + S L ACA LG +  GKW+H  +K  
Sbjct: 185 -------------EALNLFHRMQTAGIKLDNVALVSTLQACADLGVLDQGKWIHAYIKKH 231

Query: 442 NFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLF 501
             E +  +   LIDMYAKCG++ EA E+F  M  K    W  MISGY +HG G EAL+ F
Sbjct: 232 EIEIDPILGCVLIDMYAKCGDLEEAIEVFRKMEEKGVSVWTAMISGYAIHGRGREALEWF 291

Query: 502 SEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGR 561
            +M  +G+ P+ +TF  +L ACSHAGLV E   +F+SM   HGFKP  EHY CMVD+LGR
Sbjct: 292 MKMQTAGVEPNQMTFTGILTACSHAGLVHEAKLLFESMERIHGFKPSIEHYGCMVDLLGR 351

Query: 562 AGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLL 621
           AG L++A E I+ + V+P  A+WGALL AC IH +  L +   + L ++DP + G ++ L
Sbjct: 352 AGLLKEAEELIENMPVKPNAAIWGALLNACHIHGNLELGKQIGKILIQVDPGHGGRYIHL 411

Query: 622 SNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAML 681
           ++I++A  ++ QAA VR+ +K++ ++K PGC++I V GT H F +GD+ HPQ   I  ML
Sbjct: 412 ASIHAAAGEWNQAARVRRQMKEQGVSKLPGCSVISVNGTAHEFLAGDESHPQIKEIDHML 471

Query: 682 EKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNL 741
           E++  ++RE G++ +    L D+E++EKE  +  HSEKLA+ FGLI+T+PG  IRI+KNL
Sbjct: 472 EQIVERLREEGYKPKLGDLLLDLEDKEKETAIHHHSEKLAVTFGLISTKPGMTIRIVKNL 531

Query: 742 RVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           RVC DCHT  K ISKV  R I++RD  RFH FK G C+CGDYW
Sbjct: 532 RVCEDCHTVIKLISKVYAREILMRDRTRFHLFKDGNCTCGDYW 574



 Score =  136 bits (342), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 111/429 (25%), Positives = 198/429 (46%), Gaps = 56/429 (13%)

Query: 13  LSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLS--DFKATCYARALFFSIPKP 70
           L LL+      +L Q H Q++  G   D    +KL    +  +  +  YAR +F  I +P
Sbjct: 22  LHLLQRCSNMEELRQIHGQMLKTGLILDEIPASKLLAFCASPNSGSLAYARTVFDRIFRP 81

Query: 71  DLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDN-FTYSFVLSAASACCDRSIGVL 129
           + F++N +IRG+SN++ P+ ++  Y H+  ++   P N +T+ F+L A S+         
Sbjct: 82  NTFMWNTMIRGYSNSKEPEEALLLYHHMLYHS--VPHNAYTFPFLLKACSSMSALEETQQ 139

Query: 130 LHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCC 189
           +H H I  G+GS+++   +L+++Y K   +KSAR +FD++ ++DT               
Sbjct: 140 IHAHIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDT--------------- 184

Query: 190 FQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLT 249
             +++ +F  M +  G  LD+ ++ + L A A++  L  G  I     K        +  
Sbjct: 185 --EALNLFHRM-QTAGIKLDNVALVSTLQACADLGVLDQGKWIHAYIKKHEIEIDPILGC 241

Query: 250 GLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERV 309
            L+  Y+KCG++E A  +FR +    +    AMISGY  +G+   +L  F ++  +    
Sbjct: 242 VLIDMYAKCGDLEEAIEVFRKMEEKGVSVWTAMISGYAIHGRGREALEWFMKMQTAGVEP 301

Query: 310 NSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLF 369
           N  T  G+           LT C H     +G+V  + +L            ME      
Sbjct: 302 NQMTFTGI-----------LTACSH-----AGLVHEAKLL---------FESMERIHGF- 335

Query: 370 DESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAIS 429
               + S+  +  M+    + GL +EA  L + M    V PN     ++L+AC   G + 
Sbjct: 336 ----KPSIEHYGCMVDLLGRAGLLKEAEELIENM---PVKPNAAIWGALLNACHIHGNLE 388

Query: 430 LGKWVHELV 438
           LGK + +++
Sbjct: 389 LGKQIGKIL 397


>gi|147770957|emb|CAN76247.1| hypothetical protein VITISV_023383 [Vitis vinifera]
          Length = 820

 Score =  419 bits (1078), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 236/658 (35%), Positives = 369/658 (56%), Gaps = 4/658 (0%)

Query: 130 LHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPE--KDTVLWNSMISGLMKN 187
           +H   I++ Y S  F+   L++LY K   +  A  +F       K  V W S+I+ L   
Sbjct: 164 IHTQIIINNYTSLPFLFNNLINLYAKCGCLNQALLLFSITHHHFKTIVTWTSLITHLSHF 223

Query: 188 CCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYV 247
                ++ +F  M R  G + +  + +++L A A    +  G ++  L  K GF  +++V
Sbjct: 224 NMHLQALSLFNQM-RCSGPYPNQFTFSSILSASAATMMVLHGQQLHSLIHKHGFDANIFV 282

Query: 248 LTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAE 307
            T LV  Y+KC ++  A  +F  +   +L+S N+MI G+  N   + ++ +F+ +L    
Sbjct: 283 GTALVDMYAKCADMHSAVRVFDQMPERNLVSWNSMIVGFFHNNLYDRAVGVFKDVLREKT 342

Query: 308 RV-NSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAAR 366
            + N  ++  ++      G L+    +H   +K G+V  + V+ +L  +Y +    +   
Sbjct: 343 VIPNEVSVSSVLSACANMGGLNFGRQVHGVVVKYGLVPLTYVMNSLMDMYFKCRFFDEGV 402

Query: 367 KLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLG 426
           KLF    ++ + +WN ++ G+ QN   EEA + F  M+   + P+  + S++L + A L 
Sbjct: 403 KLFQCVGDRDVVTWNVLVMGFVQNDKFEEACNYFWVMRREGILPDEASFSTVLHSSASLA 462

Query: 427 AISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMIS 486
           A+  G  +H+ +    +  N+ +  +LI MYAKCG++V+A ++F+ +   + ++W  MIS
Sbjct: 463 ALHQGTAIHDQIIKLGYVKNMCILGSLITMYAKCGSLVDAYQVFEGIEDHNVISWTAMIS 522

Query: 487 GYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFK 546
            Y LHG   + ++LF  ML  GI PS VTF+ VL ACSH G V EG   F SM   H   
Sbjct: 523 AYQLHGCANQVIELFEHMLSEGIEPSHVTFVCVLSACSHTGRVEEGLAHFNSMKKIHDMN 582

Query: 547 PLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEK 606
           P  EHYACMVD+LGRAG L++A  FI+ + ++P P+VWGALLGAC  + +  + R A+E+
Sbjct: 583 PGPEHYACMVDLLGRAGWLDEAKRFIESMPMKPTPSVWGALLGACRKYGNLKMGREAAER 642

Query: 607 LFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTS 666
           LFE++P N G +VLL+N+ +      +A  VR+++    + K PGC+ I+V     VFT+
Sbjct: 643 LFEMEPYNPGNYVLLANMCTRSGRLEEANEVRRLMGVNGVRKEPGCSWIDVKNMTFVFTA 702

Query: 667 GDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGL 726
            D+ H  S  IY MLEKL   +++ G+  ET    + +EE E+E  +  HSEKLA+AFGL
Sbjct: 703 HDRSHSSSDEIYKMLEKLEKLVKKKGYVAETEFVTNHLEENEEEQGLWYHSEKLALAFGL 762

Query: 727 IATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           +     + IRI KNLR C  CHT  K  SK+  R I+VRD NRFH F  G CSCGDYW
Sbjct: 763 LTLPIDSPIRIKKNLRTCGHCHTVMKLASKIFDREIIVRDINRFHRFADGFCSCGDYW 820



 Score =  196 bits (497), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 144/541 (26%), Positives = 254/541 (46%), Gaps = 20/541 (3%)

Query: 10  NLFLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATC---YARALFFS 66
           N  L+     ++    TQ H QIII    N+ +++  L + L +  A C       L FS
Sbjct: 146 NHLLNTAIQTRSLKHATQIHTQIII----NNYTSLPFLFNNLINLYAKCGCLNQALLLFS 201

Query: 67  IPK---PDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCD 123
           I       +  +  +I   S+  M   ++  +  +R  +   P+ FT+S +LSA++A   
Sbjct: 202 ITHHHFKTIVTWTSLITHLSHFNMHLQALSLFNQMR-CSGPYPNQFTFSSILSASAATMM 260

Query: 124 RSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISG 183
              G  LH      G+ +++FVG ALVD+Y K + + SA +VFD+MPE++ V WNSMI G
Sbjct: 261 VLHGQQLHSLIHKHGFDANIFVGTALVDMYAKCADMHSAVRVFDQMPERNLVSWNSMIVG 320

Query: 184 LMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHD 243
              N  +  ++ VF D++R      +  SV++VL A A +  L  G ++  + +K G   
Sbjct: 321 FFHNNLYDRAVGVFKDVLREKTVIPNEVSVSSVLSACANMGGLNFGRQVHGVVVKYGLVP 380

Query: 244 HVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLL 303
             YV+  L+  Y KC   +    LF+ +   D+++ N ++ G+  N K E +   F  + 
Sbjct: 381 LTYVMNSLMDMYFKCRFFDEGVKLFQCVGDRDVVTWNVLVMGFVQNDKFEEACNYFWVMR 440

Query: 304 ASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEME 363
                 + ++   ++        LH    IH   +K G V N  +L +L T+Y++   + 
Sbjct: 441 REGILPDEASFSTVLHSSASLAALHQGTAIHDQIIKLGYVKNMCILGSLITMYAKCGSLV 500

Query: 364 AARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACA 423
            A ++F+   + ++ SW AMI+ Y  +G   + I LF+ M +  + P+ VT   +LSAC+
Sbjct: 501 DAYQVFEGIEDHNVISWTAMISAYQLHGCANQVIELFEHMLSEGIEPSHVTFVCVLSACS 560

Query: 424 QLGAISLG-KWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHK-SEVTW 481
             G +  G    + + K  +          ++D+  + G + EA+   + M  K +   W
Sbjct: 561 HTGRVEEGLAHFNSMKKIHDMNPGPEHYACMVDLLGRAGWLDEAKRFIESMPMKPTPSVW 620

Query: 482 NTMISG---YGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQS 538
             ++     YG    G EA +   EM      P     L+ +  C+ +G + E +E+ + 
Sbjct: 621 GALLGACRKYGNLKMGREAAERLFEM--EPYNPGNYVLLANM--CTRSGRLEEANEVRRL 676

Query: 539 M 539
           M
Sbjct: 677 M 677



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 48/176 (27%), Positives = 87/176 (49%), Gaps = 4/176 (2%)

Query: 415 VSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMS 474
           ++ +L+   Q  ++     +H  +   N+ S  ++   LI++YAKCG + +A  LF +  
Sbjct: 145 LNHLLNTAIQTRSLKHATQIHTQIIINNYTSLPFLFNNLINLYAKCGCLNQALLLFSITH 204

Query: 475 H--KSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREG 532
           H  K+ VTW ++I+        L+AL LF++M  SG  P+  TF S+L A +   +V  G
Sbjct: 205 HHFKTIVTWTSLITHLSHFNMHLQALSLFNQMRCSGPYPNQFTFSSILSASAATMMVLHG 264

Query: 533 DEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALL 588
            ++  S+IH HGF         +VD+  +   +  A+     +  E     W +++
Sbjct: 265 QQL-HSLIHKHGFDANIFVGTALVDMYAKCADMHSAVRVFDQMP-ERNLVSWNSMI 318


>gi|238478502|ref|NP_173097.2| PPR repeat domain-containing protein [Arabidopsis thaliana]
 gi|332191338|gb|AEE29459.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
          Length = 937

 Score =  419 bits (1078), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 237/766 (30%), Positives = 407/766 (53%), Gaps = 3/766 (0%)

Query: 20  KTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVII 79
           K +S   Q   Q++  G ++ L+    L   L       YA  +F  + + D   +N I 
Sbjct: 174 KDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIA 233

Query: 80  RGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGY 139
             ++ N   + S   ++ +R+      ++ T S +LS       +  G  +HG  +  G+
Sbjct: 234 AAYAQNGHIEESFRIFSLMRRFHD-EVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGF 292

Query: 140 GSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGD 199
            S + V   L+ +Y        A  VF +MP KD + WNS+++  + +    D++ +   
Sbjct: 293 DSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCS 352

Query: 200 MVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCG 259
           M+ +G + ++  +  + L A         G  +  L +  G   +  +   LVS Y K G
Sbjct: 353 MISSGKS-VNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIG 411

Query: 260 EVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIP 319
           E+  +  +   + R D+++ NA+I GY  +   + +L  F+ +       N  T+V ++ 
Sbjct: 412 EMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLS 471

Query: 320 V-FYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLA 378
               P   L     +H++ + +G  S+  V  +L T+Y++  ++ +++ LF+    +++ 
Sbjct: 472 ACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNII 531

Query: 379 SWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELV 438
           +WNAM+A    +G  EE + L  +M++  V+ +  + S  LSA A+L  +  G+ +H L 
Sbjct: 532 TWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLA 591

Query: 439 KSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEAL 498
               FE + ++  A  DMY+KCG I E  ++     ++S  +WN +IS  G HG+  E  
Sbjct: 592 VKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVC 651

Query: 499 QLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDI 558
             F EML  GI+P  VTF+S+L ACSH GLV +G   +  +  D G +P  EH  C++D+
Sbjct: 652 ATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDL 711

Query: 559 LGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYH 618
           LGR+G+L +A  FI  + ++P   VW +LL +C IH + +  R A+E L +L+PE+   +
Sbjct: 712 LGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVY 771

Query: 619 VLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIY 678
           VL SN+++    +     VR+ +  + + K   C+ +++      F  GD+ HPQ+  IY
Sbjct: 772 VLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIY 831

Query: 679 AMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRII 738
           A LE +   ++E+G+  +T  AL D +EE+KE  +  HSE+LA+A+ L++T  G+ +RI 
Sbjct: 832 AKLEDIKKLIKESGYVADTSQALQDTDEEQKEHNLWNHSERLALAYALMSTPEGSTVRIF 891

Query: 739 KNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           KNLR+C DCH+  KF+S+V GR IV+RD  RFHHF+ G+CSC DYW
Sbjct: 892 KNLRICSDCHSVYKFVSRVIGRRIVLRDQYRFHHFERGLCSCKDYW 937



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 147/540 (27%), Positives = 245/540 (45%), Gaps = 12/540 (2%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           AR LF  +P  +   +N ++ G     +    + F+  +  +  + P     SFV+++  
Sbjct: 11  ARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKM-CDLGIKPS----SFVIASLV 65

Query: 120 ACCDRS-----IGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDT 174
             C RS      GV +HG    SG  SD++V  A++ LY  +  V  +RKVF++MP+++ 
Sbjct: 66  TACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNV 125

Query: 175 VLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQC 234
           V W S++ G       ++ I ++  M R  G   +  S++ V+ +   +++  LG +I  
Sbjct: 126 VSWTSLMVGYSDKGEPEEVIDIYKGM-RGEGVGCNENSMSLVISSCGLLKDESLGRQIIG 184

Query: 235 LGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTES 294
             +K G    + V   L+S     G V+ A  +F  +   D IS N++ + Y  NG  E 
Sbjct: 185 QVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEE 244

Query: 295 SLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALST 354
           S R+F  +    + VNS+T+  L+ V     H      IH   +K G  S   V   L  
Sbjct: 245 SFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLR 304

Query: 355 VYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVT 414
           +Y+       A  +F +   K L SWN+++A +  +G + +A+ L   M +S  + N VT
Sbjct: 305 MYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVT 364

Query: 415 VSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMS 474
            +S L+AC        G+ +H LV       N  +  AL+ MY K G + E+R +   M 
Sbjct: 365 FTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMP 424

Query: 475 HKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDE 534
            +  V WN +I GY       +AL  F  M   G+  + +T +SVL AC   G + E  +
Sbjct: 425 RRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGK 484

Query: 535 IFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIH 594
              + I   GF+        ++ +  + G L  + +   GL        W A+L A   H
Sbjct: 485 PLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLD-NRNIITWNAMLAANAHH 543



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 122/457 (26%), Positives = 219/457 (47%), Gaps = 4/457 (0%)

Query: 152 LYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDST 211
           +Y KF  VK AR +FD MP ++ V WN+M+SG+++   + + +  F  M  + G    S 
Sbjct: 1   MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMC-DLGIKPSSF 59

Query: 212 SVAAVLPAVAEVQEL-RLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRD 270
            +A+++ A      + R G+++     K G    VYV T ++  Y   G V  +  +F +
Sbjct: 60  VIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEE 119

Query: 271 IVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLT 330
           +   +++S  +++ GY+  G+ E  + +++ +       N +++  +I          L 
Sbjct: 120 MPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLG 179

Query: 331 NCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQN 390
             I    +KSG+ S  +V  +L ++   +  ++ A  +FD+ SE+   SWN++ A Y QN
Sbjct: 180 RQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQN 239

Query: 391 GLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVS 450
           G  EE+  +F  M+      N  TVS++LS    +     G+ +H LV    F+S + V 
Sbjct: 240 GHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVC 299

Query: 451 TALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIR 510
             L+ MYA  G  VEA  +F  M  K  ++WN++++ +   G  L+AL L   M+ SG  
Sbjct: 300 NTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKS 359

Query: 511 PSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALE 570
            + VTF S L AC       +G  I   ++   G          +V + G+ G++ ++  
Sbjct: 360 VNYVTFTSALAACFTPDFFEKG-RILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRR 418

Query: 571 FIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKL 607
            +  +      A W AL+G     +D + A  A + +
Sbjct: 419 VLLQMPRRDVVA-WNALIGGYAEDEDPDKALAAFQTM 454


>gi|224067848|ref|XP_002302563.1| predicted protein [Populus trichocarpa]
 gi|222844289|gb|EEE81836.1| predicted protein [Populus trichocarpa]
          Length = 514

 Score =  419 bits (1078), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 201/510 (39%), Positives = 313/510 (61%)

Query: 275 DLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIH 334
           D +S N++I G    G  E +L  F+++ +   +++  T+  ++  F     +     +H
Sbjct: 5   DEVSWNSLILGCVREGFEEDALSFFQKMRSRDMKIDEYTLPSVLNSFASMKVMQNAISVH 64

Query: 335 SFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTE 394
              +K+G  +   V  AL  +Y++  +++ A  +F +  +K + SW +++ GY+ NG  E
Sbjct: 65  CLIIKTGFEAYKLVNNALIDMYAKQGKLDCAIMVFSKMVDKDVVSWTSLVTGYSHNGSYE 124

Query: 395 EAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALI 454
           EAI LF +M+ S V P+ + V+S+LSACA+L  +  G+ +H  +     ES++ V  +L+
Sbjct: 125 EAIKLFCKMRISGVYPDQIAVASVLSACAELTVMDFGQQIHATLVKSGLESSLSVDNSLV 184

Query: 455 DMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGV 514
            MYAKCG+IV+A   FD M  +  ++W  +I GY  +G G  +LQ + +M+ +G +P  +
Sbjct: 185 TMYAKCGSIVDANRAFDNMPTRDVISWTALIVGYAQNGRGKHSLQFYDQMIATGTKPDYI 244

Query: 515 TFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKG 574
           TF+ +L+ACSH GL+  G   F++M   +G KP  EHYACM+D+LGR+G+L +A   +  
Sbjct: 245 TFIGLLFACSHNGLLGSGRAYFEAMDKVYGIKPGPEHYACMIDLLGRSGKLAEAKGLLNQ 304

Query: 575 LAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQA 634
           + V P   VW ALL AC +HK+  L  +A++ LFEL+P N   +V+LSN+YSA   +  A
Sbjct: 305 MVVAPDAVVWKALLAACRVHKELELGEMAAKNLFELEPMNSMPYVMLSNMYSAAGKWEDA 364

Query: 635 ATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQ 694
           A +R++++ R + K PG + IE       F S D+ HP    IY+ ++++   ++EAG+ 
Sbjct: 365 ARIRRLMRSRGICKEPGYSWIETNSKVSTFMSEDRNHPLRNEIYSKIDEIIMLIKEAGYV 424

Query: 695 TETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFI 754
            +   ALHD ++E KEL +  HSEKLA+AFGL+    G  IRI KNLRVC DCHTA K+ 
Sbjct: 425 PDMSFALHDTDDEVKELGLAYHSEKLAVAFGLLTVPQGAPIRIFKNLRVCGDCHTAMKYT 484

Query: 755 SKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           SKV  R I++RD+N FHHF  G CSCGDYW
Sbjct: 485 SKVYARHIILRDSNCFHHFTEGRCSCGDYW 514



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 82/325 (25%), Positives = 166/325 (51%), Gaps = 3/325 (0%)

Query: 169 MPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRL 228
           M   D V WNS+I G ++    +D++  F  M R+    +D  ++ +VL + A ++ ++ 
Sbjct: 1   MEFDDEVSWNSLILGCVREGFEEDALSFFQKM-RSRDMKIDEYTLPSVLNSFASMKVMQN 59

Query: 229 GMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTC 288
            + + CL +K GF  +  V   L+  Y+K G+++ A ++F  +V  D++S  ++++GY+ 
Sbjct: 60  AISVHCLIIKTGFEAYKLVNNALIDMYAKQGKLDCAIMVFSKMVDKDVVSWTSLVTGYSH 119

Query: 289 NGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSV 348
           NG  E +++LF ++  S    +   +  ++        +     IH+  +KSG+ S+ SV
Sbjct: 120 NGSYEEAIKLFCKMRISGVYPDQIAVASVLSACAELTVMDFGQQIHATLVKSGLESSLSV 179

Query: 349 LTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKV 408
             +L T+Y++   +  A + FD    + + SW A+I GY QNG  + ++  + +M A+  
Sbjct: 180 DNSLVTMYAKCGSIVDANRAFDNMPTRDVISWTALIVGYAQNGRGKHSLQFYDQMIATGT 239

Query: 409 APNPVTVSSILSACAQLGAISLGK-WVHELVKSRNFESNIYVSTALIDMYAKCGNIVEAR 467
            P+ +T   +L AC+  G +  G+ +   + K    +        +ID+  + G + EA+
Sbjct: 240 KPDYITFIGLLFACSHNGLLGSGRAYFEAMDKVYGIKPGPEHYACMIDLLGRSGKLAEAK 299

Query: 468 ELFDLMSHKSE-VTWNTMISGYGLH 491
            L + M    + V W  +++   +H
Sbjct: 300 GLLNQMVVAPDAVVWKALLAACRVH 324



 Score =  125 bits (315), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 108/403 (26%), Positives = 183/403 (45%), Gaps = 38/403 (9%)

Query: 75  FNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHA 134
           +N +I G       + ++ F+  +R    +  D +T   VL++ ++       + +H   
Sbjct: 9   WNSLILGCVREGFEEDALSFFQKMRSRD-MKIDEYTLPSVLNSFASMKVMQNAISVHCLI 67

Query: 135 IVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSI 194
           I +G+ +   V  AL+D+Y K   +  A  VF KM +KD V W S+++G   N  ++++I
Sbjct: 68  IKTGFEAYKLVNNALIDMYAKQGKLDCAIMVFSKMVDKDVVSWTSLVTGYSHNGSYEEAI 127

Query: 195 WVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSF 254
            +F  M R  G + D  +VA+VL A AE+  +  G +I    +K G    + V   LV+ 
Sbjct: 128 KLFCKM-RISGVYPDQIAVASVLSACAELTVMDFGQQIHATLVKSGLESSLSVDNSLVTM 186

Query: 255 YSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTI 314
           Y+KCG +  A   F ++   D+IS  A+I GY  NG+ + SL+ + Q++A+  + +  T 
Sbjct: 187 YAKCGSIVDANRAFDNMPTRDVISWTALIVGYAQNGRGKHSLQFYDQMIATGTKPDYITF 246

Query: 315 VGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSE 374
           +GL           L  C H+  L SG     +   A+  VY                 +
Sbjct: 247 IGL-----------LFACSHNGLLGSG----RAYFEAMDKVY---------------GIK 276

Query: 375 KSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKW- 433
                +  MI    ++G   EA  L  +M    VAP+ V   ++L+AC     + LG+  
Sbjct: 277 PGPEHYACMIDLLGRSGKLAEAKGLLNQMV---VAPDAVVWKALLAACRVHKELELGEMA 333

Query: 434 VHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHK 476
              L +     S  YV   L +MY+  G   +A  +  LM  +
Sbjct: 334 AKNLFELEPMNSMPYV--MLSNMYSAAGKWEDAARIRRLMRSR 374


>gi|115488988|ref|NP_001066981.1| Os12g0552300 [Oryza sativa Japonica Group]
 gi|113649488|dbj|BAF30000.1| Os12g0552300 [Oryza sativa Japonica Group]
          Length = 1175

 Score =  419 bits (1078), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 249/742 (33%), Positives = 388/742 (52%), Gaps = 8/742 (1%)

Query: 5   TPQSRNLFLSLLKGAKTQSQLTQTHAQIIIHGFQNDL---STVTKLAHRLSDFKATCYAR 61
           TP   +  LS    A+  +Q    HAQ   HGF +++   + V  L  R   F+    A 
Sbjct: 142 TPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFR---LAE 198

Query: 62  ALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASAC 121
            +F  +P  D   FN +I G +     + ++  +  + + + L+PD  T S +L+A ++ 
Sbjct: 199 RVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEM-QFSGLSPDCVTISSLLAACASL 257

Query: 122 CDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMI 181
            D   G  LH +   +G  SD  +  +L+DLY K   V++A  +F+     + VLWN M+
Sbjct: 258 GDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLML 317

Query: 182 SGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGF 241
               +      S  +F  M +  G   +  +   +L      +E+ LG +I  L +K GF
Sbjct: 318 VAFGQINDLAKSFELFCQM-QAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGF 376

Query: 242 HDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQ 301
              +YV   L+  YSK G +E+A  +   +   D++S  +MI+GY  +   + +L  F++
Sbjct: 377 ESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKE 436

Query: 302 LLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNE 361
           +       ++  +   I        +     IH+    SG   + S+  AL  +Y+R   
Sbjct: 437 MQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGR 496

Query: 362 MEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSA 421
           +  A   F+E   K   +WN +++G+ Q+GL EEA+ +F  M  S V  N  T  S LSA
Sbjct: 497 IREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSA 556

Query: 422 CAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTW 481
            A L  I  GK +H  V          V  ALI +Y KCG+  +A+  F  MS ++EV+W
Sbjct: 557 SANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSW 616

Query: 482 NTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIH 541
           NT+I+    HG GLEAL LF +M   GI+P+ VTF+ VL ACSH GLV EG   F+SM  
Sbjct: 617 NTIITSCSQHGRGLEALDLFDQMKKEGIKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSD 676

Query: 542 DHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLAR 601
           ++G +P  +HYAC++DI GRAGQL++A +FI+ + +     VW  LL AC +HK+  +  
Sbjct: 677 EYGIRPRPDHYACVIDIFGRAGQLDRAKKFIEEMPIAADAMVWRTLLSACKVHKNIEVGE 736

Query: 602 VASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTP 661
            A++ L EL+P +   +VLLSN Y+    +     VR++++ R + K PG + IEV    
Sbjct: 737 FAAKHLLELEPHDSASYVLLSNAYAVTEKWANRDQVRKMMRDRGVRKEPGRSWIEVKNVV 796

Query: 662 HVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLA 721
           H F  GD+LHP +  IY  L  +N ++ + G++ E     HD E+E ++    VHSEKLA
Sbjct: 797 HAFFVGDRLHPLAEQIYNFLAVINDRVAKVGYKQEKYHLFHDKEQEGRDPTDLVHSEKLA 856

Query: 722 IAFGLIATEPGTEIRIIKNLRV 743
           + FGL++  P   +R+IKNLRV
Sbjct: 857 VTFGLMSLPPCMPLRVIKNLRV 878



 Score =  243 bits (619), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 150/537 (27%), Positives = 277/537 (51%), Gaps = 8/537 (1%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           AR +F  +   D   +  ++ G++ N + + ++  Y  + +   + P  +  S VLS+ +
Sbjct: 96  ARRVFEELSARDNVSWVAMLSGYAQNGLGEEALGLYRQMHR-AGVVPTPYVLSSVLSSCT 154

Query: 120 ACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNS 179
                + G L+H      G+ S++FVG A++ LY +    + A +VF  MP +DTV +N+
Sbjct: 155 KAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNT 214

Query: 180 MISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKL 239
           +ISG  +    + ++ +F +M +  G   D  +++++L A A + +L+ G ++     K 
Sbjct: 215 LISGHAQCGHGEHALEIFEEM-QFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKA 273

Query: 240 GFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLF 299
           G      +   L+  Y KCG+VE A ++F    R +++  N M+  +        S  LF
Sbjct: 274 GISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELF 333

Query: 300 RQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRL 359
            Q+ A+  R N  T   ++        + L   IHS  +K+G  S+  V   L  +YS+ 
Sbjct: 334 CQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKY 393

Query: 360 NEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSIL 419
             +E AR++ +   EK + SW +MIAGY Q+   ++A++ F+EMQ   + P+ + ++S +
Sbjct: 394 GWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAI 453

Query: 420 SACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEV 479
           S CA + A+  G  +H  +    +  ++ +  AL+++YA+CG I EA   F+ + HK E+
Sbjct: 454 SGCAGINAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEI 513

Query: 480 TWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSM 539
           TWN ++SG+   G   EAL++F  M  SG++ +  TF+S L A ++   +++G +I   +
Sbjct: 514 TWNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARV 573

Query: 540 IH-DHGFKPLAEHYACMVDILGRAGQLEKA-LEFIKGLAVEPGPAVWGALLGACMIH 594
           I   H F+   E    ++ + G+ G  E A +EF +    E     W  ++ +C  H
Sbjct: 574 IKTGHSFE--TEVGNALISLYGKCGSFEDAKMEFSE--MSERNEVSWNTIITSCSQH 626



 Score =  223 bits (567), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 143/491 (29%), Positives = 243/491 (49%), Gaps = 6/491 (1%)

Query: 81  GFSNNEMPKSSIC-FYTHLRKNTALTPDNFTYSFVLSAASACCDR-SIGVLLHGHAIVSG 138
           GF  +E P   +  F    R++  L P +F  +  L A      R  +   +H  A+  G
Sbjct: 15  GFLAHEDPAKVLSLFADKARQHGGLGPLDF--ACALRACRGNGRRWQVVPEIHAKAVTRG 72

Query: 139 YGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFG 198
            G    VG  L+DLY K   V  AR+VF+++  +D V W +M+SG  +N   ++++ ++ 
Sbjct: 73  LGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEALGLYR 132

Query: 199 DMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKC 258
            M R  G       +++VL +  + +    G  I   G K GF   ++V   +++ Y +C
Sbjct: 133 QMHR-AGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRC 191

Query: 259 GEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLI 318
           G    AE +F D+   D ++ N +ISG+   G  E +L +F ++  S    +  TI  L+
Sbjct: 192 GSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLL 251

Query: 319 PVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLA 378
                 G L     +HS+  K+GI S+  +  +L  +Y +  ++E A  +F+ S   ++ 
Sbjct: 252 AACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVV 311

Query: 379 SWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELV 438
            WN M+  + Q     ++  LF +MQA+ + PN  T   IL  C     I LG+ +H L 
Sbjct: 312 LWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLS 371

Query: 439 KSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEAL 498
               FES++YVS  LIDMY+K G + +AR + +++  K  V+W +MI+GY  H    +AL
Sbjct: 372 VKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDAL 431

Query: 499 QLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDI 558
             F EM   GI P  +   S +  C+    +R+G +I  + I+  G+      +  +V++
Sbjct: 432 AAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQI-HARIYVSGYSGDVSIWNALVNL 490

Query: 559 LGRAGQLEKAL 569
             R G++ +A 
Sbjct: 491 YARCGRIREAF 501



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 112/399 (28%), Positives = 197/399 (49%), Gaps = 26/399 (6%)

Query: 231 EIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNG 290
           EI    +  G   +  V   L+  YSK G V  A  +F ++   D +S  AM+SGY  NG
Sbjct: 63  EIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNG 122

Query: 291 KTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNC-----------IHSFCLK 339
             E +L L+RQ+  +          G++P  Y    + L++C           IH+   K
Sbjct: 123 LGEEALGLYRQMHRA----------GVVPTPYVLSSV-LSSCTKAELFAQGRLIHAQGYK 171

Query: 340 SGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISL 399
            G  S   V  A+ T+Y R      A ++F +   +   ++N +I+G+ Q G  E A+ +
Sbjct: 172 HGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEI 231

Query: 400 FQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAK 459
           F+EMQ S ++P+ VT+SS+L+ACA LG +  G  +H  +      S+  +  +L+D+Y K
Sbjct: 232 FEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVK 291

Query: 460 CGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSV 519
           CG++  A  +F+     + V WN M+  +G      ++ +LF +M  +GIRP+  T+  +
Sbjct: 292 CGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCI 351

Query: 520 LYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEP 579
           L  C+    +  G++I  S+    GF+        ++D+  + G LEKA   ++ L  E 
Sbjct: 352 LRTCTCTREIDLGEQI-HSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLK-EK 409

Query: 580 GPAVWGALLGACMIHKDTNLARVASEKLFE--LDPENVG 616
               W +++   + H+    A  A +++ +  + P+N+G
Sbjct: 410 DVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIG 448



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 52/179 (29%), Positives = 86/179 (48%), Gaps = 14/179 (7%)

Query: 373 SEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGK 432
           + +  AS    +AG+  +    + +SLF +         P+  +  L AC   G     +
Sbjct: 2   TRRGAASLGRTLAGFLAHEDPAKVLSLFADKARQHGGLGPLDFACALRACRGNGR----R 57

Query: 433 W-----VHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISG 487
           W     +H    +R       V   LID+Y+K G ++ AR +F+ +S +  V+W  M+SG
Sbjct: 58  WQVVPEIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSG 117

Query: 488 YGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFK 546
           Y  +G G EAL L+ +M  +G+ P+     SVL +C+ A L  +G      +IH  G+K
Sbjct: 118 YAQNGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQG-----RLIHAQGYK 171


>gi|20146226|dbj|BAB89008.1| PPR repeat protein-like [Oryza sativa Japonica Group]
 gi|125573391|gb|EAZ14906.1| hypothetical protein OsJ_04836 [Oryza sativa Japonica Group]
          Length = 785

 Score =  419 bits (1077), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 238/733 (32%), Positives = 392/733 (53%), Gaps = 17/733 (2%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           AR L   +P+ +   FN++I  +S   +   S+      R+   +  D F+Y+  L+A S
Sbjct: 62  ARRLLDEMPRRNAVSFNLLIDAYSREGLAPLSLETLARARR-AGVDVDRFSYAAALAACS 120

Query: 120 ACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNS 179
                  G  +H  AI+ G  S +FV  +LV +Y K   +  AR+VFD   E+D V WNS
Sbjct: 121 RAGHLRAGRAVHALAILDGLSSGVFVSNSLVSMYSKCGEMGEARRVFDVAEERDDVSWNS 180

Query: 180 MISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQE--LRLGMEIQCLGL 237
           ++SG ++    ++ + VF  M+R GG  L+S ++ +V+   +   +  + +   +    +
Sbjct: 181 LVSGYVRAGAREEMVRVFA-MMRRGGMGLNSFALGSVIKCCSGRGDGTMDIAEAVHGCVI 239

Query: 238 KLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGY----TCNGKTE 293
           K G    V++++ ++  Y+K G +  A  LFR +  P+++  N MI+G+    T  GK  
Sbjct: 240 KAGLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQEPNVVMFNTMIAGFCRTETVIGKEV 299

Query: 294 SS--LRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTA 351
           +S  L L+ ++ +   +    T   ++      G+L     IH   +K     +  + +A
Sbjct: 300 ASEALTLYSEVQSRGMQPTEFTFSSVLRACNLAGYLEFGKQIHGQVIKYTFQEDDFIGSA 359

Query: 352 LSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPN 411
           L  +Y     ME   + F  S +  + +W AM++G  QN L E+A+SLF E   + + P+
Sbjct: 360 LIDLYFNSGCMEDGFRCFRSSPKHDIVTWTAMVSGCVQNELHEKALSLFHESLGAGLKPD 419

Query: 412 PVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFD 471
             T+SS+++ACA L     G+ +        F+    +  + + MYA+ G++  A   F 
Sbjct: 420 LFTISSVMNACASLAVARAGEQIQCFATKSGFDRFTVMGNSCVHMYARSGDVDAATRRFQ 479

Query: 472 LMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVRE 531
            M     V+W+ +IS +  HG   +AL  F EM+ + + P+ +TFL VL ACSH GLV E
Sbjct: 480 EMESHDVVSWSAVISCHAQHGCARDALHFFDEMVDAKVVPNEITFLGVLTACSHGGLVDE 539

Query: 532 GDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGAC 591
           G   +++M  D+G  P  +H  C+VD+LGRAG+L  A  FI        P +W +LL +C
Sbjct: 540 GLRYYETMTKDYGLSPTIKHCTCVVDLLGRAGRLADAEAFISNSIFHADPVIWRSLLASC 599

Query: 592 MIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPG 651
            IH+D    ++ + ++ EL+P +   +V+L N+Y    +   A+  R ++K+R + K PG
Sbjct: 600 RIHRDLERGQLVANRIMELEPTSSASYVILYNMYLDAGELSLASKTRDLMKQRGVKKEPG 659

Query: 652 CTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKEL 711
            + IE+    H F +GD+ HP+S+AIY  LE++  ++ +    T+T     ++ + E+ L
Sbjct: 660 LSWIELKCGVHSFVAGDKSHPESSAIYTKLEEMLSRIEKLA-TTDT-----EISKREQNL 713

Query: 712 MMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFH 771
            M  HSEKLA+A G+I       IR++KNLRVC DCH+  K ISK   R I++RD  RFH
Sbjct: 714 -MNCHSEKLAVALGMIHLPQSAPIRVMKNLRVCRDCHSTMKLISKSENREIILRDPIRFH 772

Query: 772 HFKGGVCSCGDYW 784
           HF+ G CSC DYW
Sbjct: 773 HFRDGSCSCADYW 785



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 122/437 (27%), Positives = 205/437 (46%), Gaps = 10/437 (2%)

Query: 140 GSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGD 199
            + LF+   L+  Y +      AR++ D+MP ++ V +N +I    +      S+     
Sbjct: 40  AASLFLRNTLLAAYCRLGGPLPARRLLDEMPRRNAVSFNLLIDAYSREGLAPLSLETLA- 98

Query: 200 MVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCG 259
             R  G  +D  S AA L A +    LR G  +  L +  G    V+V   LVS YSKCG
Sbjct: 99  RARRAGVDVDRFSYAAALAACSRAGHLRAGRAVHALAILDGLSSGVFVSNSLVSMYSKCG 158

Query: 260 EVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIP 319
           E+  A  +F      D +S N+++SGY   G  E  +R+F  +      +NS  +  +I 
Sbjct: 159 EMGEARRVFDVAEERDDVSWNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVIK 218

Query: 320 VFYPFGH--LHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSL 377
                G   + +   +H   +K+G+ S+  +++A+  +Y++   +  A  LF    E ++
Sbjct: 219 CCSGRGDGTMDIAEAVHGCVIKAGLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQEPNV 278

Query: 378 ASWNAMIAGYTQ------NGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLG 431
             +N MIAG+ +        +  EA++L+ E+Q+  + P   T SS+L AC   G +  G
Sbjct: 279 VMFNTMIAGFCRTETVIGKEVASEALTLYSEVQSRGMQPTEFTFSSVLRACNLAGYLEFG 338

Query: 432 KWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLH 491
           K +H  V    F+ + ++ +ALID+Y   G + +    F        VTW  M+SG   +
Sbjct: 339 KQIHGQVIKYTFQEDDFIGSALIDLYFNSGCMEDGFRCFRSSPKHDIVTWTAMVSGCVQN 398

Query: 492 GHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEH 551
               +AL LF E L +G++P   T  SV+ AC+   + R G++I Q      GF      
Sbjct: 399 ELHEKALSLFHESLGAGLKPDLFTISSVMNACASLAVARAGEQI-QCFATKSGFDRFTVM 457

Query: 552 YACMVDILGRAGQLEKA 568
               V +  R+G ++ A
Sbjct: 458 GNSCVHMYARSGDVDAA 474



 Score =  142 bits (358), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 96/356 (26%), Positives = 179/356 (50%), Gaps = 10/356 (2%)

Query: 245 VYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLA 304
           +++   L++ Y + G    A  L  ++ R + +S N +I  Y+  G    SL    +   
Sbjct: 43  LFLRNTLLAAYCRLGGPLPARRLLDEMPRRNAVSFNLLIDAYSREGLAPLSLETLARARR 102

Query: 305 SAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEA 364
           +   V+  +    +      GHL     +H+  +  G+ S   V  +L ++YS+  EM  
Sbjct: 103 AGVDVDRFSYAAALAACSRAGHLRAGRAVHALAILDGLSSGVFVSNSLVSMYSKCGEMGE 162

Query: 365 ARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQ 424
           AR++FD + E+   SWN++++GY + G  EE + +F  M+   +  N   + S++  C+ 
Sbjct: 163 ARRVFDVAEERDDVSWNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVIKCCSG 222

Query: 425 L--GAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWN 482
              G + + + VH  V     +S++++ +A+IDMYAK G +VEA  LF  +   + V +N
Sbjct: 223 RGDGTMDIAEAVHGCVIKAGLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQEPNVVMFN 282

Query: 483 TMISGY----GLHGHGL--EALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIF 536
           TMI+G+     + G  +  EAL L+SE+   G++P+  TF SVL AC+ AG +  G +I 
Sbjct: 283 TMIAGFCRTETVIGKEVASEALTLYSEVQSRGMQPTEFTFSSVLRACNLAGYLEFGKQIH 342

Query: 537 QSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACM 592
             +I  + F+      + ++D+   +G +E      +  + +     W A++  C+
Sbjct: 343 GQVIK-YTFQEDDFIGSALIDLYFNSGCMEDGFRCFRS-SPKHDIVTWTAMVSGCV 396



 Score =  129 bits (324), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 86/332 (25%), Positives = 158/332 (47%), Gaps = 19/332 (5%)

Query: 17  KGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFN 76
           +G  T       H  +I  G  +D+  V+ +    +   A   A ALF S+ +P++ +FN
Sbjct: 223 RGDGTMDIAEAVHGCVIKAGLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQEPNVVMFN 282

Query: 77  VIIRGFSN------NEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLL 130
            +I GF         E+   ++  Y+ + ++  + P  FT+S VL A +       G  +
Sbjct: 283 TMIAGFCRTETVIGKEVASEALTLYSEV-QSRGMQPTEFTFSSVLRACNLAGYLEFGKQI 341

Query: 131 HGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCF 190
           HG  I   +  D F+G+AL+DLYF    ++   + F   P+ D V W +M+SG ++N   
Sbjct: 342 HGQVIKYTFQEDDFIGSALIDLYFNSGCMEDGFRCFRSSPKHDIVTWTAMVSGCVQNELH 401

Query: 191 QDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTG 250
           + ++ +F + +   G   D  ++++V+ A A +   R G +IQC   K GF     +   
Sbjct: 402 EKALSLFHESL-GAGLKPDLFTISSVMNACASLAVARAGEQIQCFATKSGFDRFTVMGNS 460

Query: 251 LVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVN 310
            V  Y++ G+V+ A   F+++   D++S +A+IS +  +G    +L  F +++ +    N
Sbjct: 461 CVHMYARSGDVDAATRRFQEMESHDVVSWSAVISCHAQHGCARDALHFFDEMVDAKVVPN 520

Query: 311 SSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGI 342
             T +G+           LT C H   +  G+
Sbjct: 521 EITFLGV-----------LTACSHGGLVDEGL 541



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 69/260 (26%), Positives = 124/260 (47%), Gaps = 8/260 (3%)

Query: 352 LSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPN 411
           L   Y RL     AR+L DE   ++  S+N +I  Y++ GL   ++      + + V  +
Sbjct: 49  LLAAYCRLGGPLPARRLLDEMPRRNAVSFNLLIDAYSREGLAPLSLETLARARRAGVDVD 108

Query: 412 PVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFD 471
             + ++ L+AC++ G +  G+ VH L       S ++VS +L+ MY+KCG + EAR +FD
Sbjct: 109 RFSYAAALAACSRAGHLRAGRAVHALAILDGLSSGVFVSNSLVSMYSKCGEMGEARRVFD 168

Query: 472 LMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVRE 531
           +   + +V+WN+++SGY   G   E +++F+ M   G+  +     SV+  CS  G   +
Sbjct: 169 VAEERDDVSWNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVIKCCSGRG---D 225

Query: 532 GDEIFQSMIH----DHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGAL 587
           G       +H      G        + M+D+  + G L +A    + +  EP   ++  +
Sbjct: 226 GTMDIAEAVHGCVIKAGLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQ-EPNVVMFNTM 284

Query: 588 LGACMIHKDTNLARVASEKL 607
           +      +      VASE L
Sbjct: 285 IAGFCRTETVIGKEVASEAL 304


>gi|79527297|ref|NP_198857.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171829|sp|Q9FND6.1|PP411_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g40410, mitochondrial; Flags: Precursor
 gi|10178153|dbj|BAB11598.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|17065126|gb|AAL32717.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|30725418|gb|AAP37731.1| At5g40410 [Arabidopsis thaliana]
 gi|332007162|gb|AED94545.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 608

 Score =  419 bits (1077), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 217/577 (37%), Positives = 333/577 (57%), Gaps = 3/577 (0%)

Query: 211 TSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRD 270
            +V++++ AV     + L   + C  +K   + H ++   LV  Y + G    AE LF +
Sbjct: 32  ANVSSLIAAVKSCVSIELCRLLHCKVVKSVSYRHGFIGDQLVGCYLRLGHDVCAEKLFDE 91

Query: 271 IVRPDLISCNAMISGYTCNGKTESSLRLFRQLLAS--AERVNSSTIVGLIPVFYPFGHLH 328
           +   DL+S N++ISGY+  G       +  +++ S    R N  T + +I      G   
Sbjct: 92  MPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKE 151

Query: 329 LTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYT 388
              CIH   +K G++    V+ A    Y +  ++ ++ KLF++ S K+L SWN MI  + 
Sbjct: 152 EGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHL 211

Query: 389 QNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIY 448
           QNGL E+ ++ F   +     P+  T  ++L +C  +G + L + +H L+    F  N  
Sbjct: 212 QNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKC 271

Query: 449 VSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSG 508
           ++TAL+D+Y+K G + ++  +F  ++    + W  M++ Y  HG G +A++ F  M+H G
Sbjct: 272 ITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVHYG 331

Query: 509 IRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKA 568
           I P  VTF  +L ACSH+GLV EG   F++M   +   P  +HY+CMVD+LGR+G L+ A
Sbjct: 332 ISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDA 391

Query: 569 LEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAE 628
              IK + +EP   VWGALLGAC ++KDT L   A+E+LFEL+P +   +V+LSNIYSA 
Sbjct: 392 YGLIKEMPMEPSSGVWGALLGACRVYKDTQLGTKAAERLFELEPRDGRNYVMLSNIYSAS 451

Query: 629 RDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKM 688
             +  A+ +R ++K++ L +A GC+ IE G   H F  GD  HP+S  I   L+++  KM
Sbjct: 452 GLWKDASRIRNLMKQKGLVRASGCSYIEHGNKIHKFVVGDWSHPESEKIQKKLKEIRKKM 511

Query: 689 R-EAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDC 747
           + E G++++T   LHDV E+ KE M+  HSEK+A+AFGL+   P   I I KNLR+C DC
Sbjct: 512 KSEMGYKSKTEFVLHDVGEDVKEEMINQHSEKIAMAFGLLVVSPMEPIIIRKNLRICGDC 571

Query: 748 HTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           H   K IS +  R I++RD+ RFHHF  G CSC DYW
Sbjct: 572 HETAKAISLIEKRRIIIRDSKRFHHFLDGSCSCSDYW 608



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 101/400 (25%), Positives = 177/400 (44%), Gaps = 9/400 (2%)

Query: 95  YTHLRKNTALTPDNFTYSF------VLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAA 148
           +  L +   L+  +F +S       +++A  +C    +  LLH   + S      F+G  
Sbjct: 12  FRFLYRRRFLSQSSFVHSLDANVSSLIAAVKSCVSIELCRLLHCKVVKSVSYRHGFIGDQ 71

Query: 149 LVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGD-MVRNGGTW 207
           LV  Y +      A K+FD+MPE+D V WNS+ISG            V    M+   G  
Sbjct: 72  LVGCYLRLGHDVCAEKLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFR 131

Query: 208 LDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELL 267
            +  +  +++ A         G  I  L +K G  + V V+   +++Y K G++  +  L
Sbjct: 132 PNEVTFLSMISACVYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKL 191

Query: 268 FRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHL 327
           F D+   +L+S N MI  +  NG  E  L  F          + +T + ++      G +
Sbjct: 192 FEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVV 251

Query: 328 HLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGY 387
            L   IH   +  G   N  + TAL  +YS+L  +E +  +F E +     +W AM+A Y
Sbjct: 252 RLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAY 311

Query: 388 TQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSR-NFESN 446
             +G   +AI  F+ M    ++P+ VT + +L+AC+  G +  GK   E +  R   +  
Sbjct: 312 ATHGFGRDAIKHFELMVHYGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPR 371

Query: 447 IYVSTALIDMYAKCGNIVEARELFDLMSHK-SEVTWNTMI 485
           +   + ++D+  + G + +A  L   M  + S   W  ++
Sbjct: 372 LDHYSCMVDLLGRSGLLQDAYGLIKEMPMEPSSGVWGALL 411



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 109/453 (24%), Positives = 191/453 (42%), Gaps = 66/453 (14%)

Query: 35  HGFQND--LSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSI 92
           HGF  D  +    +L H +        A  LF  +P+ DL  +N +I G+S         
Sbjct: 65  HGFIGDQLVGCYLRLGHDVC-------AEKLFDEMPERDLVSWNSLISGYSGRGYLGK-- 115

Query: 93  CFYTHLR---KNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAAL 149
           CF    R         P+  T+  ++SA      +  G  +HG  +  G   ++ V  A 
Sbjct: 116 CFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEEGRCIHGLVMKFGVLEEVKVVNAF 175

Query: 150 VDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLD 209
           ++ Y K   + S+ K+F+ +  K+ V WN+MI   ++N   +  +  F +M R  G   D
Sbjct: 176 INWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYF-NMSRRVGHEPD 234

Query: 210 STSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFR 269
             +  AVL +  ++  +RL   I  L +  GF  +  + T L+  YSK G +E +  +F 
Sbjct: 235 QATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTVFH 294

Query: 270 DIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHL 329
           +I  PD ++  AM++ Y  +G    +++ F  ++            G+ P    F HL L
Sbjct: 295 EITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVH----------YGISPDHVTFTHL-L 343

Query: 330 TNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEK-----SLASWNAMI 384
             C H     SG+V                   E  +  F+  S++      L  ++ M+
Sbjct: 344 NACSH-----SGLV-------------------EEGKHYFETMSKRYRIDPRLDHYSCMV 379

Query: 385 AGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELV------ 438
               ++GL ++A  L +EM    + P+     ++L AC       LG    E +      
Sbjct: 380 DLLGRSGLLQDAYGLIKEMP---MEPSSGVWGALLGACRVYKDTQLGTKAAERLFELEPR 436

Query: 439 KSRNFE--SNIYVSTALIDMYAKCGNIVEAREL 469
             RN+   SNIY ++ L    ++  N+++ + L
Sbjct: 437 DGRNYVMLSNIYSASGLWKDASRIRNLMKQKGL 469


>gi|224057824|ref|XP_002299342.1| predicted protein [Populus trichocarpa]
 gi|222846600|gb|EEE84147.1| predicted protein [Populus trichocarpa]
          Length = 684

 Score =  419 bits (1077), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 232/665 (34%), Positives = 363/665 (54%), Gaps = 16/665 (2%)

Query: 127 GVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMK 186
           G L H     +      F+  +++ +Y K   +  ARKVFD+M E++ V WN++IS   +
Sbjct: 29  GRLFHEQMQRTVKNPPEFLENSVLKMYCKCGSLADARKVFDEMRERNLVSWNTIISAYAE 88

Query: 187 NCCFQDSIWVFGDMVR-----NGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGF 241
           N  F     +F +M+      NG T++        L ++     L +G +I    ++ G 
Sbjct: 89  NGVFDKGFCMFSNMLELETKPNGSTYI------GFLRSLLNPSGLEIGKQIHSHAIRSGL 142

Query: 242 HDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQ 301
             +  V T + + Y KCG +E AEL+F  +   + ++   ++ GYT   +   +L LF +
Sbjct: 143 GSNASVNTAISNMYVKCGWLEGAELVFEKMSEKNAVAWTGIMVGYTQAERQMDALALFAK 202

Query: 302 LLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNE 361
           ++     ++      ++        L+    IH   +K G+ S  SV T L   Y + + 
Sbjct: 203 MVNEGVELDEYVFSIVLKACAGLEELNFGRQIHGHIVKLGLESEVSVGTPLVDFYVKCSN 262

Query: 362 MEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSA 421
           +E+A K F+  SE +  SW+A+I GY Q G  EEA+  F+ ++   V  N  T +SI  A
Sbjct: 263 LESATKAFEWISEPNDVSWSALITGYCQMGEFEEALKTFESLRTRSVDINSFTYTSIFQA 322

Query: 422 CAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTW 481
           C+ L   + G   H      +  +  +  +A+I MY++CG +  A  +F+ +     V W
Sbjct: 323 CSALADFNSGAQAHADAIKSSLVAYQHGESAMITMYSRCGRLDYATRVFESIDDPDAVAW 382

Query: 482 NTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIH 541
             +I+GY   G+  EAL+LF  M   G+RP+ VTF++VL ACSH+GLV EG +  +SM  
Sbjct: 383 TAIIAGYAYQGNAPEALKLFRRMQDCGVRPNAVTFIAVLTACSHSGLVIEGRQYLESMSS 442

Query: 542 DHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLAR 601
           ++G     +HY CMVDI  RAG L++ALE I+ +   P    W  LLG C  +++  +  
Sbjct: 443 NYGVATTIDHYDCMVDIYSRAGFLQEALELIRSMPFSPDAMSWKCLLGGCWTYRNLEIGE 502

Query: 602 VASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTP 661
           +A+E LF+LDPE+   ++L+ N+Y++   + +AA VR+++ +R L K   C+ I V G  
Sbjct: 503 LAAENLFQLDPEDTAGYILMFNLYASFGKWKEAANVRKMMAERNLRKELSCSWITVKGKV 562

Query: 662 HVFTSGDQLHPQSTAIYAMLEKLNGKM--REAGFQTETVTALHDVEEEEKELMMKVHSEK 719
           H F  GD+ HPQ+  IY+ LE LN  +   E G  TE   + + + E +++L+  VHSE+
Sbjct: 563 HRFIVGDKHHPQTEEIYSKLEALNDSVIKEETGLLTEEDVS-NSLPERKEQLL--VHSER 619

Query: 720 LAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCS 779
           LA+AFGLI+T     + + KNLR C DCH   K +S +TGR IVVRD+ RFHHFK G CS
Sbjct: 620 LALAFGLISTPSSAPVVVFKNLRACKDCHDFGKQVSLITGREIVVRDSFRFHHFKLGECS 679

Query: 780 CGDYW 784
           C DYW
Sbjct: 680 CNDYW 684



 Score =  202 bits (514), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 129/430 (30%), Positives = 216/430 (50%), Gaps = 4/430 (0%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           AR +F  + + +L  +N II  ++ N +     C ++++ +     P+  TY   L +  
Sbjct: 64  ARKVFDEMRERNLVSWNTIISAYAENGVFDKGFCMFSNMLE-LETKPNGSTYIGFLRSLL 122

Query: 120 ACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNS 179
                 IG  +H HAI SG GS+  V  A+ ++Y K  W++ A  VF+KM EK+ V W  
Sbjct: 123 NPSGLEIGKQIHSHAIRSGLGSNASVNTAISNMYVKCGWLEGAELVFEKMSEKNAVAWTG 182

Query: 180 MISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKL 239
           ++ G  +     D++ +F  MV N G  LD    + VL A A ++EL  G +I    +KL
Sbjct: 183 IMVGYTQAERQMDALALFAKMV-NEGVELDEYVFSIVLKACAGLEELNFGRQIHGHIVKL 241

Query: 240 GFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLF 299
           G    V V T LV FY KC  +E A   F  I  P+ +S +A+I+GY   G+ E +L+ F
Sbjct: 242 GLESEVSVGTPLVDFYVKCSNLESATKAFEWISEPNDVSWSALITGYCQMGEFEEALKTF 301

Query: 300 RQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRL 359
             L   +  +NS T   +          +     H+  +KS +V+     +A+ T+YSR 
Sbjct: 302 ESLRTRSVDINSFTYTSIFQACSALADFNSGAQAHADAIKSSLVAYQHGESAMITMYSRC 361

Query: 360 NEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSIL 419
             ++ A ++F+   +    +W A+IAGY   G   EA+ LF+ MQ   V PN VT  ++L
Sbjct: 362 GRLDYATRVFESIDDPDAVAWTAIIAGYAYQGNAPEALKLFRRMQDCGVRPNAVTFIAVL 421

Query: 420 SACAQLGAISLGK-WVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSE 478
           +AC+  G +  G+ ++  +  +    + I     ++D+Y++ G + EA EL   M    +
Sbjct: 422 TACSHSGLVIEGRQYLESMSSNYGVATTIDHYDCMVDIYSRAGFLQEALELIRSMPFSPD 481

Query: 479 -VTWNTMISG 487
            ++W  ++ G
Sbjct: 482 AMSWKCLLGG 491



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 45/186 (24%), Positives = 91/186 (48%), Gaps = 2/186 (1%)

Query: 403 MQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGN 462
           M+ + ++ +P +   +  AC ++ ++  G+  HE ++        ++  +++ MY KCG+
Sbjct: 1   MEDAGISVSPRSYKCLFEACGKIKSLFDGRLFHEQMQRTVKNPPEFLENSVLKMYCKCGS 60

Query: 463 IVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYA 522
           + +AR++FD M  ++ V+WNT+IS Y  +G   +   +FS ML    +P+G T++  L +
Sbjct: 61  LADARKVFDEMRERNLVSWNTIISAYAENGVFDKGFCMFSNMLELETKPNGSTYIGFLRS 120

Query: 523 CSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPA 582
             +   +  G +I    I   G    A     + ++  + G LE A E +     E    
Sbjct: 121 LLNPSGLEIGKQIHSHAIRS-GLGSNASVNTAISNMYVKCGWLEGA-ELVFEKMSEKNAV 178

Query: 583 VWGALL 588
            W  ++
Sbjct: 179 AWTGIM 184


>gi|326526571|dbj|BAJ97302.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 851

 Score =  419 bits (1077), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 262/792 (33%), Positives = 417/792 (52%), Gaps = 24/792 (3%)

Query: 6   PQSRNLFLSLLKGAKTQSQLTQTHAQIIIHG---FQNDLSTVTKLAHRLSDFKATCYARA 62
           P +R+     +  A    Q+    A++ + G     N L ++     R+ D      A  
Sbjct: 71  PAARSCGFLRVGAAAAGRQVHALAAKLGLPGDPFVGNSLVSMYGRCGRVED------AEK 124

Query: 63  LFFSIPKP--DLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASA 120
           +F  IP    ++  +N ++   S +  P+  +  +           D  T   VL   +A
Sbjct: 125 VFGGIPDAARNIVSWNALMAALSGD--PRRGLELFRDCLVAVGGMVDEATLVTVLPMCAA 182

Query: 121 CCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSM 180
                 G  +HG A  SG+ +   VG ALVD+Y K   +  A + F + P    V WN M
Sbjct: 183 LGWSETGRAVHGLAAKSGWDAPARVGNALVDMYAKCGELADAERAFPEAPS--VVSWNVM 240

Query: 181 ISGLMKNCCFQDSIWVFGDMV--RNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLK 238
           +    +N     +  +  DM    +G    D  +V +VLPA +   EL    E+    ++
Sbjct: 241 LGAYTRNREAGAAFGLLRDMQIKEHGSVPADEITVLSVLPACSGPTELSRLRELHAFTVR 300

Query: 239 LGFHDHV-YVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLR 297
            G       V   LV+ Y +CG +  A+ +F DI R  + S N +IS +     T +++ 
Sbjct: 301 RGLDAASDKVPNALVAAYGRCGRLLHADRVFTDIRRKTVSSWNTLISAHA-QQNTAAAIE 359

Query: 298 LFRQLL-ASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVY 356
           LF Q+  A   + +  +I  L+       HL      H F L++G+  ++ +  +L + Y
Sbjct: 360 LFIQMTNACGLKPDGFSIGSLLMACADPKHLLHVKATHGFILRNGLERDTVIRASLLSAY 419

Query: 357 SRLNEME-AARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKV-APNPVT 414
            R +  E  AR LFD   EK    W AMI+GY+QNGL  E++ LF+EMQ+ +    + ++
Sbjct: 420 IRCSRTEYLARVLFDAMEEKGEVLWIAMISGYSQNGLPGESLQLFREMQSVEGHCSSVIS 479

Query: 415 VSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFD-LM 473
            +S L AC++L ++ LGK +H      +   + ++S++LIDMY+KCG + +AR  FD L 
Sbjct: 480 ATSALMACSELSSVRLGKEMHCFALKADLCDDPFLSSSLIDMYSKCGFVEDARTFFDRLK 539

Query: 474 SHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGD 533
           +  ++V+W  MI+GY ++G G EA++L+ +M   G+ P   T+L +L AC HAG++ EG 
Sbjct: 540 ARDAKVSWTAMITGYAVNGLGREAVELYGKMRREGMEPDEFTYLGLLMACGHAGMLEEGL 599

Query: 534 EIFQSMI-HDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACM 592
             F  M  H H  +   EHY+C++ +L RAG+   A+  +  +  EP   +  ++L AC 
Sbjct: 600 RFFDEMRNHHHKIEVKLEHYSCVIGMLSRAGRFADAVALMAEMPQEPDAKILSSVLSACH 659

Query: 593 IHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGC 652
           IH +  L    +E+L EL+P+   ++VL SN+Y+  R +     VR++++   +AK PGC
Sbjct: 660 IHGEAELGSDVAERLLELEPDKAEHYVLASNMYAGSRRWDDMRKVRKMLRDAGIAKEPGC 719

Query: 653 TLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELM 712
           + I+V G  + F +G+  HP+   +  M   L  ++RE G+  +T   LH++EEEEK   
Sbjct: 720 SWIDVAGKVYSFVAGENPHPEMEQVRGMWRSLEERIREIGYVPDTTVVLHELEEEEKVEA 779

Query: 713 MKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHH 772
           +  HSEK A+ FGL+ T     +R+ KN+R+C DCH A + ISKVTGR IVVRD  RFHH
Sbjct: 780 LWWHSEKQAVTFGLLRTATPATVRVFKNIRMCKDCHNAARLISKVTGRDIVVRDKKRFHH 839

Query: 773 FKGGVCSCGDYW 784
           F+GG+CSCGDYW
Sbjct: 840 FRGGICSCGDYW 851



 Score =  179 bits (453), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 143/506 (28%), Positives = 233/506 (46%), Gaps = 31/506 (6%)

Query: 101 NTALTPDNFTYSFVLSAASACCDRSIGVLLHG---HAIVSGYG--SDLFVGAALVDLYFK 155
           +  + PD FT      AA +C    +G    G   HA+ +  G   D FVG +LV +Y +
Sbjct: 59  SEGIAPDRFTLP---PAARSCGFLRVGAAAAGRQVHALAAKLGLPGDPFVGNSLVSMYGR 115

Query: 156 FSWVKSARKVFDKMPE--KDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSV 213
              V+ A KVF  +P+  ++ V WN++++ L  +   +  + +F D +   G  +D  ++
Sbjct: 116 CGRVEDAEKVFGGIPDAARNIVSWNALMAALSGDP--RRGLELFRDCLVAVGGMVDEATL 173

Query: 214 AAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVR 273
             VLP  A +     G  +  L  K G+     V   LV  Y+KCGE+  AE  F +   
Sbjct: 174 VTVLPMCAALGWSETGRAVHGLAAKSGWDAPARVGNALVDMYAKCGELADAERAFPEA-- 231

Query: 274 PDLISCNAMISGYTCNGKTESSLRLFRQLLASAE---RVNSSTIVGLIPVFYPFGHLHLT 330
           P ++S N M+  YT N +  ++  L R +          +  T++ ++P       L   
Sbjct: 232 PSVVSWNVMLGAYTRNREAGAAFGLLRDMQIKEHGSVPADEITVLSVLPACSGPTELSRL 291

Query: 331 NCIHSFCLKSGI-VSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQ 389
             +H+F ++ G+  ++  V  AL   Y R   +  A ++F +   K+++SWN +I+ + Q
Sbjct: 292 RELHAFTVRRGLDAASDKVPNALVAAYGRCGRLLHADRVFTDIRRKTVSSWNTLISAHAQ 351

Query: 390 NGLTEEAISLFQEM-QASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIY 448
              T  AI LF +M  A  + P+  ++ S+L ACA    +   K  H  +     E +  
Sbjct: 352 QN-TAAAIELFIQMTNACGLKPDGFSIGSLLMACADPKHLLHVKATHGFILRNGLERDTV 410

Query: 449 VSTALIDMYAKCGNI-VEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLH- 506
           +  +L+  Y +C      AR LFD M  K EV W  MISGY  +G   E+LQLF EM   
Sbjct: 411 IRASLLSAYIRCSRTEYLARVLFDAMEEKGEVLWIAMISGYSQNGLPGESLQLFREMQSV 470

Query: 507 SGIRPSGVTFLSVLYACSHAGLVREGDEI----FQSMIHDHGFKPLAEHYACMVDILGRA 562
            G   S ++  S L ACS    VR G E+     ++ + D  F       + ++D+  + 
Sbjct: 471 EGHCSSVISATSALMACSELSSVRLGKEMHCFALKADLCDDPFLS-----SSLIDMYSKC 525

Query: 563 GQLEKALEFIKGLAVEPGPAVWGALL 588
           G +E A  F   L        W A++
Sbjct: 526 GFVEDARTFFDRLKARDAKVSWTAMI 551



 Score = 90.1 bits (222), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 80/292 (27%), Positives = 134/292 (45%), Gaps = 32/292 (10%)

Query: 280 NAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNC-----IH 334
           NA+++ ++  G+   +L L   LLA++E +       L P     G L +        +H
Sbjct: 33  NALLADHSRAGRHADALALLPPLLAASEGIAPDRFT-LPPAARSCGFLRVGAAAAGRQVH 91

Query: 335 SFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFD--ESSEKSLASWNAMIAGYTQNGL 392
           +   K G+  +  V  +L ++Y R   +E A K+F     + +++ SWNA++A  +  G 
Sbjct: 92  ALAAKLGLPGDPFVGNSLVSMYGRCGRVEDAEKVFGGIPDAARNIVSWNALMAALS--GD 149

Query: 393 TEEAISLFQE-MQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVST 451
               + LF++ + A     +  T+ ++L  CA LG    G+ VH L     +++   V  
Sbjct: 150 PRRGLELFRDCLVAVGGMVDEATLVTVLPMCAALGWSETGRAVHGLAAKSGWDAPARVGN 209

Query: 452 ALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEML---HSG 508
           AL+DMYAKCG + +A   F      S V+WN M+  Y  +     A  L  +M    H  
Sbjct: 210 ALVDMYAKCGELADAERAFP--EAPSVVSWNVMLGAYTRNREAGAAFGLLRDMQIKEHGS 267

Query: 509 IRPSGVTFLSVLYACS-----------HAGLVREG-----DEIFQSMIHDHG 544
           +    +T LSVL ACS           HA  VR G     D++  +++  +G
Sbjct: 268 VPADEITVLSVLPACSGPTELSRLRELHAFTVRRGLDAASDKVPNALVAAYG 319



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 53/228 (23%), Positives = 101/228 (44%), Gaps = 13/228 (5%)

Query: 380 WNAMIAGYTQNG--LTEEAISLFQEMQASKVAPNPVTVSSILSACA--QLGAISLGKWVH 435
           WNA++A +++ G      A+       +  +AP+  T+     +C   ++GA + G+ VH
Sbjct: 32  WNALLADHSRAGRHADALALLPPLLAASEGIAPDRFTLPPAARSCGFLRVGAAAAGRQVH 91

Query: 436 ELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSE--VTWNTMISGYGLHGH 493
            L        + +V  +L+ MY +CG + +A ++F  +   +   V+WN +++   L G 
Sbjct: 92  ALAAKLGLPGDPFVGNSLVSMYGRCGRVEDAEKVFGGIPDAARNIVSWNALMA--ALSGD 149

Query: 494 GLEALQLFSEMLHS-GIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHY 552
               L+LF + L + G      T ++VL  C+  G    G  +   +    G+   A   
Sbjct: 150 PRRGLELFRDCLVAVGGMVDEATLVTVLPMCAALGWSETGRAV-HGLAAKSGWDAPARVG 208

Query: 553 ACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLA 600
             +VD+  + G+L  A    +     P    W  +LGA   +++   A
Sbjct: 209 NALVDMYAKCGELADAE---RAFPEAPSVVSWNVMLGAYTRNREAGAA 253


>gi|4966374|gb|AAD34705.1|AC006341_33 >F3O9.28 [Arabidopsis thaliana]
          Length = 1027

 Score =  419 bits (1077), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 237/766 (30%), Positives = 407/766 (53%), Gaps = 3/766 (0%)

Query: 20   KTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVII 79
            K +S   Q   Q++  G ++ L+    L   L       YA  +F  + + D   +N I 
Sbjct: 264  KDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIA 323

Query: 80   RGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGY 139
              ++ N   + S   ++ +R+      ++ T S +LS       +  G  +HG  +  G+
Sbjct: 324  AAYAQNGHIEESFRIFSLMRRFHDEV-NSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGF 382

Query: 140  GSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGD 199
             S + V   L+ +Y        A  VF +MP KD + WNS+++  + +    D++ +   
Sbjct: 383  DSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCS 442

Query: 200  MVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCG 259
            M+ +G + ++  +  + L A         G  +  L +  G   +  +   LVS Y K G
Sbjct: 443  MISSGKS-VNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIG 501

Query: 260  EVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIP 319
            E+  +  +   + R D+++ NA+I GY  +   + +L  F+ +       N  T+V ++ 
Sbjct: 502  EMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLS 561

Query: 320  V-FYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLA 378
                P   L     +H++ + +G  S+  V  +L T+Y++  ++ +++ LF+    +++ 
Sbjct: 562  ACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNII 621

Query: 379  SWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELV 438
            +WNAM+A    +G  EE + L  +M++  V+ +  + S  LSA A+L  +  G+ +H L 
Sbjct: 622  TWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLA 681

Query: 439  KSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEAL 498
                FE + ++  A  DMY+KCG I E  ++     ++S  +WN +IS  G HG+  E  
Sbjct: 682  VKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVC 741

Query: 499  QLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDI 558
              F EML  GI+P  VTF+S+L ACSH GLV +G   +  +  D G +P  EH  C++D+
Sbjct: 742  ATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDL 801

Query: 559  LGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYH 618
            LGR+G+L +A  FI  + ++P   VW +LL +C IH + +  R A+E L +L+PE+   +
Sbjct: 802  LGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVY 861

Query: 619  VLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIY 678
            VL SN+++    +     VR+ +  + + K   C+ +++      F  GD+ HPQ+  IY
Sbjct: 862  VLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIY 921

Query: 679  AMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRII 738
            A LE +   ++E+G+  +T  AL D +EE+KE  +  HSE+LA+A+ L++T  G+ +RI 
Sbjct: 922  AKLEDIKKLIKESGYVADTSQALQDTDEEQKEHNLWNHSERLALAYALMSTPEGSTVRIF 981

Query: 739  KNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
            KNLR+C DCH+  KF+S+V GR IV+RD  RFHHF+ G+CSC DYW
Sbjct: 982  KNLRICSDCHSVYKFVSRVIGRRIVLRDQYRFHHFERGLCSCKDYW 1027



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 143/540 (26%), Positives = 233/540 (43%), Gaps = 37/540 (6%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           AR LF  +P  +   +N ++ G     +    + F+  +  +  + P     SFV+++  
Sbjct: 126 ARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKM-CDLGIKPS----SFVIASLV 180

Query: 120 ACCDRS-----IGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDT 174
             C RS      GV +HG    SG  SD++V  A++ LY  +  V  +RKVF++MP+++ 
Sbjct: 181 TACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNV 240

Query: 175 VLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQC 234
           V W S++ G       ++ I ++ D                            LG +I  
Sbjct: 241 VSWTSLMVGYSDKGEPEEVIDIYKDE--------------------------SLGRQIIG 274

Query: 235 LGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTES 294
             +K G    + V   L+S     G V+ A  +F  +   D IS N++ + Y  NG  E 
Sbjct: 275 QVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEE 334

Query: 295 SLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALST 354
           S R+F  +    + VNS+T+  L+ V     H      IH   +K G  S   V   L  
Sbjct: 335 SFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLR 394

Query: 355 VYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVT 414
           +Y+       A  +F +   K L SWN+++A +  +G + +A+ L   M +S  + N VT
Sbjct: 395 MYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVT 454

Query: 415 VSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMS 474
            +S L+AC        G+ +H LV       N  +  AL+ MY K G + E+R +   M 
Sbjct: 455 FTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMP 514

Query: 475 HKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDE 534
            +  V WN +I GY       +AL  F  M   G+  + +T +SVL AC   G + E  +
Sbjct: 515 RRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGK 574

Query: 535 IFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIH 594
              + I   GF+        ++ +  + G L  + +   GL        W A+L A   H
Sbjct: 575 PLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLD-NRNIITWNAMLAANAHH 633



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 121/460 (26%), Positives = 218/460 (47%), Gaps = 29/460 (6%)

Query: 149 LVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWL 208
           L+++Y KF  VK AR +FD MP ++ V WN+M+SG+++   + + +  F  M  + G   
Sbjct: 113 LINMYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMC-DLGIKP 171

Query: 209 DSTSVAAVLPAVAEVQEL-RLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELL 267
            S  +A+++ A      + R G+++     K G    VYV T ++  Y   G V  +  +
Sbjct: 172 SSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKV 231

Query: 268 FRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHL 327
           F ++   +++S  +++ GY+  G+ E  + +++      +      I+G +         
Sbjct: 232 FEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYK------DESLGRQIIGQV--------- 276

Query: 328 HLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGY 387
                     +KSG+ S  +V  +L ++   +  ++ A  +FD+ SE+   SWN++ A Y
Sbjct: 277 ----------VKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAY 326

Query: 388 TQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNI 447
            QNG  EE+  +F  M+      N  TVS++LS    +     G+ +H LV    F+S +
Sbjct: 327 AQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVV 386

Query: 448 YVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHS 507
            V   L+ MYA  G  VEA  +F  M  K  ++WN++++ +   G  L+AL L   M+ S
Sbjct: 387 CVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISS 446

Query: 508 GIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEK 567
           G   + VTF S L AC       +G  I   ++   G          +V + G+ G++ +
Sbjct: 447 GKSVNYVTFTSALAACFTPDFFEKG-RILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSE 505

Query: 568 ALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKL 607
           +   +  +      A W AL+G     +D + A  A + +
Sbjct: 506 SRRVLLQMPRRDVVA-WNALIGGYAEDEDPDKALAAFQTM 544



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 50/173 (28%), Positives = 98/173 (56%), Gaps = 3/173 (1%)

Query: 333 IHSFCLKSGIVSNSSVLT-ALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNG 391
           +H+ C+K G+V  S + T  L  +Y++   ++ AR LFD    ++  SWN M++G  + G
Sbjct: 94  VHALCVK-GLVRLSVLHTNTLINMYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVG 152

Query: 392 LTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAI-SLGKWVHELVKSRNFESNIYVS 450
           L  E +  F++M    + P+   ++S+++AC + G++   G  VH  V      S++YVS
Sbjct: 153 LYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVS 212

Query: 451 TALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSE 503
           TA++ +Y   G +  +R++F+ M  ++ V+W +++ GY   G   E + ++ +
Sbjct: 213 TAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKD 265



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 49/150 (32%), Positives = 77/150 (51%), Gaps = 8/150 (5%)

Query: 397 ISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDM 456
           I++F++    K   NP          +Q+   + G+ VH L        ++  +  LI+M
Sbjct: 57  IAMFEKSGRKKNHWNPEISCFDQIGFSQITIETTGRAVHALCVKGLVRLSVLHTNTLINM 116

Query: 457 YAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTF 516
           Y K G +  AR LFD+M  ++EV+WNTM+SG    G  LE ++ F +M   GI+PS    
Sbjct: 117 YTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVI 176

Query: 517 LSVLYACSHAG-LVREGDEIFQSMIHDHGF 545
            S++ AC  +G + REG ++       HGF
Sbjct: 177 ASLVTACGRSGSMFREGVQV-------HGF 199


>gi|110289149|gb|ABB47711.2| pentatricopeptide, putative [Oryza sativa Japonica Group]
          Length = 697

 Score =  419 bits (1077), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 212/543 (39%), Positives = 325/543 (59%), Gaps = 1/543 (0%)

Query: 241 FHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFR 300
           F   V++   L+  Y KCG V  A  +F  +   D+ S  ++I+GY  N   + +L L  
Sbjct: 95  FAGSVFLDNSLIHLYCKCGAVADARRVFDGMPARDMCSWTSLIAGYAQNDMPDEALGLLP 154

Query: 301 QLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLN 360
            +L    + N  T   L+          +   IH+  +K     +  V +AL  +Y+R  
Sbjct: 155 GMLRGRFKPNGFTFASLLKAAGASASSGIGEQIHALTVKYDWHDDVYVGSALLDMYARCG 214

Query: 361 EMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILS 420
            M+ A  +FD+   K+  SWNA+IAG+ + G  E  + +F EMQ +       T SS+ S
Sbjct: 215 RMDMAIAVFDQLESKNGVSWNALIAGFARKGDGETTLLMFAEMQRNGFEATHFTYSSVFS 274

Query: 421 ACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVT 480
           A A +GA+  GKWVH  +       + +V   ++DMYAK G++++AR++FD +  K  VT
Sbjct: 275 AIAGIGALEQGKWVHAHMIKSGERLSAFVGNTILDMYAKSGSMIDARKVFDRVDKKDVVT 334

Query: 481 WNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMI 540
           WN+M++ +  +G G EA+  F EM   G+  + +TFLS+L ACSH GLV+EG + F  M+
Sbjct: 335 WNSMLTAFAQYGLGREAVTHFEEMRKCGVHLNQITFLSILTACSHGGLVKEGKQYFD-MM 393

Query: 541 HDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLA 600
            ++  +P  +HY  +VD+LGRAG L  AL FI  + ++P  AVWGALLG+C +HK+  + 
Sbjct: 394 KEYNLEPEIDHYVTVVDLLGRAGLLNDALVFIFKMPMKPTAAVWGALLGSCRMHKNAKIG 453

Query: 601 RVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGT 660
           + A++ +FELDP++ G  VLL NIY++   +  AA VR+++K   + K P C+ +E+  +
Sbjct: 454 QFAADHVFELDPDDTGPPVLLYNIYASTGQWDAAARVRKMMKATGVKKEPACSWVEIENS 513

Query: 661 PHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKL 720
            H+F + D  HP+S  IY   E+++ ++R+AG+   T   L  V+E+E++  ++ HSEK+
Sbjct: 514 VHMFVANDDTHPRSEEIYKKWEEISIQIRKAGYVPNTDYVLLHVDEQERQAKLQYHSEKI 573

Query: 721 AIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSC 780
           A+AF LI    G  IRI+KN+R+C DCH+A ++ISKV  R IVVRD NRFHHF  G CSC
Sbjct: 574 ALAFALINMPLGATIRIMKNIRICGDCHSAFRYISKVFKREIVVRDTNRFHHFSSGSCSC 633

Query: 781 GDY 783
           GDY
Sbjct: 634 GDY 636



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 100/363 (27%), Positives = 183/363 (50%), Gaps = 2/363 (0%)

Query: 130 LHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCC 189
           +H H   S +   +F+  +L+ LY K   V  AR+VFD MP +D   W S+I+G  +N  
Sbjct: 86  IHAHLAGSQFAGSVFLDNSLIHLYCKCGAVADARRVFDGMPARDMCSWTSLIAGYAQNDM 145

Query: 190 FQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLT 249
             +++ +   M+R G    +  + A++L A        +G +I  L +K  +HD VYV +
Sbjct: 146 PDEALGLLPGMLR-GRFKPNGFTFASLLKAAGASASSGIGEQIHALTVKYDWHDDVYVGS 204

Query: 250 GLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERV 309
            L+  Y++CG ++ A  +F  +   + +S NA+I+G+   G  E++L +F ++  +    
Sbjct: 205 ALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGDGETTLLMFAEMQRNGFEA 264

Query: 310 NSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLF 369
              T   +       G L     +H+  +KSG   ++ V   +  +Y++   M  ARK+F
Sbjct: 265 THFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNTILDMYAKSGSMIDARKVF 324

Query: 370 DESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAIS 429
           D   +K + +WN+M+  + Q GL  EA++ F+EM+   V  N +T  SIL+AC+  G + 
Sbjct: 325 DRVDKKDVVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHLNQITFLSILTACSHGGLVK 384

Query: 430 LGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARE-LFDLMSHKSEVTWNTMISGY 488
            GK   +++K  N E  I     ++D+  + G + +A   +F +    +   W  ++   
Sbjct: 385 EGKQYFDMMKEYNLEPEIDHYVTVVDLLGRAGLLNDALVFIFKMPMKPTAAVWGALLGSC 444

Query: 489 GLH 491
            +H
Sbjct: 445 RMH 447



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 64/208 (30%), Positives = 111/208 (53%)

Query: 333 IHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGL 392
           IH+    S    +  +  +L  +Y +   +  AR++FD    + + SW ++IAGY QN +
Sbjct: 86  IHAHLAGSQFAGSVFLDNSLIHLYCKCGAVADARRVFDGMPARDMCSWTSLIAGYAQNDM 145

Query: 393 TEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTA 452
            +EA+ L   M   +  PN  T +S+L A     +  +G+ +H L    ++  ++YV +A
Sbjct: 146 PDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASSGIGEQIHALTVKYDWHDDVYVGSA 205

Query: 453 LIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPS 512
           L+DMYA+CG +  A  +FD +  K+ V+WN +I+G+   G G   L +F+EM  +G   +
Sbjct: 206 LLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGDGETTLLMFAEMQRNGFEAT 265

Query: 513 GVTFLSVLYACSHAGLVREGDEIFQSMI 540
             T+ SV  A +  G + +G  +   MI
Sbjct: 266 HFTYSSVFSAIAGIGALEQGKWVHAHMI 293



 Score =  112 bits (280), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 77/339 (22%), Positives = 155/339 (45%), Gaps = 17/339 (5%)

Query: 5   TPQSRNLFLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALF 64
           TP+  +  ++     ++       HA +    F   +     L H      A   AR +F
Sbjct: 63  TPRLYHSLITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVADARRVF 122

Query: 65  FSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDR 124
             +P  D+  +  +I G++ N+MP  ++     + +     P+ FT++ +L AA A    
Sbjct: 123 DGMPARDMCSWTSLIAGYAQNDMPDEALGLLPGMLRGR-FKPNGFTFASLLKAAGASASS 181

Query: 125 SIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGL 184
            IG  +H   +   +  D++VG+AL+D+Y +   +  A  VFD++  K+ V WN++I+G 
Sbjct: 182 GIGEQIHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGF 241

Query: 185 MKNCCFQDSIWVFGDMVRNGGTWLDST--SVAAVLPAVAEVQELRLGMEIQCLGLKLGFH 242
            +    + ++ +F +M RNG    ++T  + ++V  A+A +  L  G  +    +K G  
Sbjct: 242 ARKGDGETTLLMFAEMQRNG---FEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGER 298

Query: 243 DHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQL 302
              +V   ++  Y+K G +  A  +F  + + D+++ N+M++ +   G    ++  F ++
Sbjct: 299 LSAFVGNTILDMYAKSGSMIDARKVFDRVDKKDVVTWNSMLTAFAQYGLGREAVTHFEEM 358

Query: 303 LASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSG 341
                 +N  T + +           LT C H   +K G
Sbjct: 359 RKCGVHLNQITFLSI-----------LTACSHGGLVKEG 386



 Score = 86.3 bits (212), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 51/195 (26%), Positives = 96/195 (49%), Gaps = 10/195 (5%)

Query: 400 FQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAK 459
              + A ++A  P    S+++ACA+  ++   + +H  +    F  ++++  +LI +Y K
Sbjct: 52  LDSVDARELAATPRLYHSLITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCK 111

Query: 460 CGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSV 519
           CG + +AR +FD M  +   +W ++I+GY  +    EAL L   ML    +P+G TF S+
Sbjct: 112 CGAVADARRVFDGMPARDMCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASL 171

Query: 520 LYACSHAGLVREGDEIFQSMI----HDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGL 575
           L A   +     G++I    +    HD  +   A     ++D+  R G+++ A+     L
Sbjct: 172 LKAAGASASSGIGEQIHALTVKYDWHDDVYVGSA-----LLDMYARCGRMDMAIAVFDQL 226

Query: 576 AVEPGPAVWGALLGA 590
             + G + W AL+  
Sbjct: 227 ESKNGVS-WNALIAG 240


>gi|125591422|gb|EAZ31772.1| hypothetical protein OsJ_15924 [Oryza sativa Japonica Group]
          Length = 855

 Score =  419 bits (1076), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 265/834 (31%), Positives = 416/834 (49%), Gaps = 99/834 (11%)

Query: 29  HAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFS-IPKPDLFLFNVIIRGFSN--- 84
           H +++  G  + +     L H      A   AR L  + I +P++   N+++ G++    
Sbjct: 43  HGRLVTVGLASAVFLQNTLLHAYLSCGALSDARRLLRADIKEPNVITHNIMMNGYAKQGS 102

Query: 85  --------NEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIV 136
                   + MP+  +  +  L  +T+    ++     +S  +  C R +   L G    
Sbjct: 103 LSDAEELFDRMPRRDVASWNTLMSDTSRPAGSW-----MSCGALGC-RELAPQLLGLFWK 156

Query: 137 SGYGSDLFVGAALVDLYFKFSWVKSARKVF------------------------------ 166
             +  D  V  ALVD++ +  +V  A ++F                              
Sbjct: 157 FDFWGDPDVETALVDMFVRCGYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEY 216

Query: 167 -DKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQE 225
            + M E+D V WN MI+ L ++   ++++ +  +M R G   LDST+  + L A A +  
Sbjct: 217 FEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKG-VRLDSTTYTSSLTACARLFS 275

Query: 226 LRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISG 285
           L  G ++    ++       YV + L+  Y+KCG  + A+ +F  +   + +S   +I G
Sbjct: 276 LGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGG 335

Query: 286 ---YTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSG- 341
              Y C  K   S+ LF Q+ A    ++   +  LI   +    L L   +HS CLKSG 
Sbjct: 336 SLQYECFSK---SVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGH 392

Query: 342 ----IVSNSSV--------------------------LTALSTVYSRLNEMEAARKLFDE 371
               +VSNS +                           T++ T YS++  +  AR+ FD 
Sbjct: 393 NRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDG 452

Query: 372 SSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASK-VAPNPVTVSSILSACAQLGAISL 430
            + ++  +WNAM+  Y Q+G  E+ + ++  M + K V P+ VT  ++   CA +GA  L
Sbjct: 453 MATRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADIGANKL 512

Query: 431 GKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGL 490
           G  +           N+ V+ A I MY+KCG I EA++LFDL++ K  V+WN MI+GY  
Sbjct: 513 GDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKLFDLLNGKDVVSWNAMITGYSQ 572

Query: 491 HGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAE 550
           HG G +A + F +ML  G +P  +++++VL  CSH+GLV+EG   F  M   HG  P  E
Sbjct: 573 HGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQEGKLYFDMMTRVHGISPGLE 632

Query: 551 HYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFEL 610
           H++CMVD+LGRAG L +A + I  + ++P   VWGALL AC IH +  LA +A++ +FEL
Sbjct: 633 HFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGALLSACKIHGNDELAELAAKHVFEL 692

Query: 611 DPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQL 670
           D  + G ++LL+ IYS       +A VR++++ + + K PG + +EV    HVF + D  
Sbjct: 693 DSPDSGSYMLLAKIYSDAGKSDDSAQVRKLMRDKGIKKNPGYSWMEVENKVHVFKADDVS 752

Query: 671 HPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATE 730
           HPQ  AI   +++L  K+   G+           E    E+    HSEKLA+AFG+++  
Sbjct: 753 HPQVIAIRNKMDELMEKIAHLGYVR--------TESPRSEIH---HSEKLAVAFGIMSLP 801

Query: 731 PGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
               I I+KNLR+C DCHT  K IS VT R  V+RD  RFHHFK G CSCGDYW
Sbjct: 802 AWMPIHIMKNLRICGDCHTVIKLISSVTDREFVIRDGVRFHHFKSGSCSCGDYW 855



 Score = 90.5 bits (223), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 91/417 (21%), Positives = 170/417 (40%), Gaps = 62/417 (14%)

Query: 27  QTHAQIIIHGFQND---LSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFS 83
           Q HA++I    Q D    S + +L  +   FK    A+ +F S+   +   + V+I G  
Sbjct: 281 QLHAKVIRSLPQIDPYVASALIELYAKCGSFKE---AKRVFNSLQDRNSVSWTVLIGGSL 337

Query: 84  NNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDL 143
             E    S+  +  +R    +  D F  + ++S      D  +G  LH   + SG+   +
Sbjct: 338 QYECFSKSVELFNQMRAEL-MAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAI 396

Query: 144 FVGAALVDLYFK-------------------FSW------------VKSARKVFDKMPEK 172
            V  +L+ LY K                    SW            +  AR+ FD M  +
Sbjct: 397 VVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMATR 456

Query: 173 DTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEI 232
           + + WN+M+   +++   +D + ++  M+       D  +   +    A++   +LG +I
Sbjct: 457 NAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQI 516

Query: 233 QCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKT 292
               +K G   +V V    ++ YSKCG +  A+ LF  +   D++S NAMI+GY+ +G  
Sbjct: 517 IGHTVKAGLILNVSVANAAITMYSKCGRISEAQKLFDLLNGKDVVSWNAMITGYSQHGMG 576

Query: 293 ESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKS------------ 340
           + + + F  +L+   + +  + V +           L+ C HS  ++             
Sbjct: 577 KQAAKTFDDMLSKGAKPDYISYVAV-----------LSGCSHSGLVQEGKLYFDMMTRVH 625

Query: 341 GIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLAS-WNAMIAGYTQNGLTEEA 396
           GI       + +  +  R   +  A+ L D+   K  A  W A+++    +G  E A
Sbjct: 626 GISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGALLSACKIHGNDELA 682



 Score = 69.3 bits (168), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 71/308 (23%), Positives = 116/308 (37%), Gaps = 44/308 (14%)

Query: 325 GHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFD-ESSEKSLASWNAM 383
           G L     +H   +  G+ S   +   L   Y     +  AR+L   +  E ++ + N M
Sbjct: 34  GALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDARRLLRADIKEPNVITHNIM 93

Query: 384 IAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSI------LSACAQLGAISLGKWVHEL 437
           + GY + G   +A  LF  M    VA     +S          +C  LG   L   +  L
Sbjct: 94  MNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSDTSRPAGSWMSCGALGCRELAPQLLGL 153

Query: 438 VKSRNFESNIYVSTALIDMYAKCG-------------------------------NIVEA 466
               +F  +  V TAL+DM+ +CG                                I  A
Sbjct: 154 FWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHA 213

Query: 467 RELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHA 526
            E F+ M+ +  V+WN MI+     G   EAL L  EM   G+R    T+ S L AC+  
Sbjct: 214 IEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARL 273

Query: 527 GLVREGDEIFQSMIHDHGFKPLAEHY--ACMVDILGRAGQLEKALEFIKGLAVEPGPAVW 584
             +  G ++   +I      P  + Y  + ++++  + G  ++A      L  +     W
Sbjct: 274 FSLGWGKQLHAKVIRS---LPQIDPYVASALIELYAKCGSFKEAKRVFNSLQ-DRNSVSW 329

Query: 585 GALLGACM 592
             L+G  +
Sbjct: 330 TVLIGGSL 337



 Score = 44.3 bits (103), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 26/101 (25%), Positives = 51/101 (50%), Gaps = 3/101 (2%)

Query: 407 KVAPNPVT--VSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIV 464
           ++ P+ VT  ++  L +C   GA++  + +H  + +    S +++   L+  Y  CG + 
Sbjct: 13  RLLPHAVTQALADALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALS 72

Query: 465 EARELFDL-MSHKSEVTWNTMISGYGLHGHGLEALQLFSEM 504
           +AR L    +   + +T N M++GY   G   +A +LF  M
Sbjct: 73  DARRLLRADIKEPNVITHNIMMNGYAKQGSLSDAEELFDRM 113


>gi|414867973|tpg|DAA46530.1| TPA: hypothetical protein ZEAMMB73_503614 [Zea mays]
          Length = 923

 Score =  419 bits (1076), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 234/759 (30%), Positives = 401/759 (52%), Gaps = 2/759 (0%)

Query: 27  QTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNE 86
           Q  A +++ G    +S    L     + +    A  LF  + + D   +N +I  +S+ E
Sbjct: 166 QVTAHVVVSGLLTHVSVANSLITMFGNLRRVQDAERLFDRMEERDRISWNAMISMYSHEE 225

Query: 87  MPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVG 146
           +        + +R    + PD  T   ++S  ++    ++G  +H   + SG    + + 
Sbjct: 226 VYSKCFIVLSDMRHGE-VKPDVTTLCSLVSVCASSDLVALGSGIHSLCVSSGLHCSVPLI 284

Query: 147 AALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGT 206
            ALV++Y     +  A  +F  M  +D + WN+MIS  +++    +++   G +++    
Sbjct: 285 NALVNMYSTAGKLDEAESLFRNMSRRDVISWNTMISSYVQSNSCVEALETLGQLLQTDEG 344

Query: 207 WLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAEL 266
             +S + ++ L A +  + L  G  I  + L+    + + +   L++ YSKC  +E  E 
Sbjct: 345 PPNSMTFSSALGACSSPEALMNGRTIHAMILQRSLQNVLLIGNSLLTMYSKCNSMEDTER 404

Query: 267 LFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGH 326
           +F  +   D++SCN +  GY       +++R+F  +  +  + N  T++ L       G 
Sbjct: 405 VFESMPCYDVVSCNVLTGGYAALEDVANAMRVFSWMRGTGIKPNYITMINLQGTCKSLGD 464

Query: 327 LHLTNC-IHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIA 385
           LH     +H++  ++G++S+  +  +L T+Y+   ++E++  +F   + KS+ SWNA+IA
Sbjct: 465 LHSYGMPLHAYVTQTGLLSDEYITNSLITMYATCGDLESSTGIFSRINNKSVISWNAIIA 524

Query: 386 GYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFES 445
              ++G  EEAI LF + Q +    +   ++  LS+ A L ++  G  +H L      + 
Sbjct: 525 ANVRHGRGEEAIKLFMDSQHAGNKLDRFCLAECLSSSANLASLEEGMQLHGLSVKNGLDC 584

Query: 446 NIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEML 505
           + +V  A +DMY KCG +    +     +H+    WNT+ISGY  +G+  EA   F  M+
Sbjct: 585 DSHVVNATMDMYGKCGKMDCMLKTLPDPAHRPTQCWNTLISGYARYGYFKEAEDTFKHMV 644

Query: 506 HSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQL 565
             G +P  VTF+++L ACSHAGL+ +G + + SM    G  P  +H  C+VD+LGR G+ 
Sbjct: 645 SVGQKPDYVTFVALLSACSHAGLIDKGMDYYNSMAPTFGVSPGIKHCVCIVDLLGRLGKF 704

Query: 566 EKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIY 625
            +A +FI  + V P   +W +LL +   HK+ ++ R A++ L ELDP +   +VLLSN+Y
Sbjct: 705 AEAEKFIDEMPVLPNDLIWRSLLSSSRTHKNLDIGRKAAKNLLELDPFDDSAYVLLSNLY 764

Query: 626 SAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLN 685
           +    ++    +R  +K  KL K P C+ +++      F  GD+ H  +  IY  L+++ 
Sbjct: 765 ATNARWVDVDKLRSHMKTIKLNKRPACSWLKLKNEVSTFGIGDRSHMHAEKIYVKLDEIL 824

Query: 686 GKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCL 745
            K+RE G+  +T +ALHD +EE+KE  +  HSEKLA+A+GL+    G+ IRI KNLRVC 
Sbjct: 825 LKLREVGYVADTSSALHDTDEEQKEHNLWNHSEKLALAYGLLVVPEGSTIRIFKNLRVCA 884

Query: 746 DCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           DCH   K +S V  R IV+RD  RFH FK G CSC D+W
Sbjct: 885 DCHLVFKLVSMVFHREIVLRDPYRFHQFKHGSCSCSDFW 923



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 147/562 (26%), Positives = 265/562 (47%), Gaps = 6/562 (1%)

Query: 29  HAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNEMP 88
           HA     G   ++   T L H          A+ LF+ +P+ ++  +  I+   S+N   
Sbjct: 67  HALTHRAGLMGNVYIGTALLHLYGSRGLVLNAQRLFWEMPQRNVVSWTAIMVALSSNGCM 126

Query: 89  KSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAA 148
           + ++  Y  +RK   +   N   + V+S   A  D   G+ +  H +VSG  + + V  +
Sbjct: 127 EEALVAYRRMRKEGVMCNAN-ALATVVSLCGALEDEVAGLQVTAHVVVSGLLTHVSVANS 185

Query: 149 LVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWL 208
           L+ ++     V+ A ++FD+M E+D + WN+MIS       +     V  DM R+G    
Sbjct: 186 LITMFGNLRRVQDAERLFDRMEERDRISWNAMISMYSHEEVYSKCFIVLSDM-RHGEVKP 244

Query: 209 DSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLF 268
           D T++ +++   A    + LG  I  L +  G H  V ++  LV+ YS  G+++ AE LF
Sbjct: 245 DVTTLCSLVSVCASSDLVALGSGIHSLCVSSGLHCSVPLINALVNMYSTAGKLDEAESLF 304

Query: 269 RDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAE-RVNSSTIVGLIPVFYPFGHL 327
           R++ R D+IS N MIS Y  +     +L    QLL + E   NS T    +        L
Sbjct: 305 RNMSRRDVISWNTMISSYVQSNSCVEALETLGQLLQTDEGPPNSMTFSSALGACSSPEAL 364

Query: 328 HLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGY 387
                IH+  L+  + +   +  +L T+YS+ N ME   ++F+      + S N +  GY
Sbjct: 365 MNGRTIHAMILQRSLQNVLLIGNSLLTMYSKCNSMEDTERVFESMPCYDVVSCNVLTGGY 424

Query: 388 TQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAI-SLGKWVHELVKSRNFESN 446
                   A+ +F  M+ + + PN +T+ ++   C  LG + S G  +H  V      S+
Sbjct: 425 AALEDVANAMRVFSWMRGTGIKPNYITMINLQGTCKSLGDLHSYGMPLHAYVTQTGLLSD 484

Query: 447 IYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLH 506
            Y++ +LI MYA CG++  +  +F  +++KS ++WN +I+    HG G EA++LF +  H
Sbjct: 485 EYITNSLITMYATCGDLESSTGIFSRINNKSVISWNAIIAANVRHGRGEEAIKLFMDSQH 544

Query: 507 SGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLE 566
           +G +         L + ++   + EG ++    + + G    +      +D+ G+ G+++
Sbjct: 545 AGNKLDRFCLAECLSSSANLASLEEGMQLHGLSVKN-GLDCDSHVVNATMDMYGKCGKMD 603

Query: 567 KALEFIKGLAVEPGPAVWGALL 588
             L+ +   A  P    W  L+
Sbjct: 604 CMLKTLPDPAHRP-TQCWNTLI 624



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 109/409 (26%), Positives = 208/409 (50%), Gaps = 6/409 (1%)

Query: 120 ACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNS 179
           A C  +I  L H     +G   ++++G AL+ LY     V +A+++F +MP+++ V W +
Sbjct: 60  AACGAAIHALTHR----AGLMGNVYIGTALLHLYGSRGLVLNAQRLFWEMPQRNVVSWTA 115

Query: 180 MISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKL 239
           ++  L  N C ++++  +  M R  G   ++ ++A V+     +++   G+++    +  
Sbjct: 116 IMVALSSNGCMEEALVAYRRM-RKEGVMCNANALATVVSLCGALEDEVAGLQVTAHVVVS 174

Query: 240 GFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLF 299
           G   HV V   L++ +     V+ AE LF  +   D IS NAMIS Y+          + 
Sbjct: 175 GLLTHVSVANSLITMFGNLRRVQDAERLFDRMEERDRISWNAMISMYSHEEVYSKCFIVL 234

Query: 300 RQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRL 359
             +     + + +T+  L+ V      + L + IHS C+ SG+  +  ++ AL  +YS  
Sbjct: 235 SDMRHGEVKPDVTTLCSLVSVCASSDLVALGSGIHSLCVSSGLHCSVPLINALVNMYSTA 294

Query: 360 NEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAI-SLFQEMQASKVAPNPVTVSSI 418
            +++ A  LF   S + + SWN MI+ Y Q+    EA+ +L Q +Q  +  PN +T SS 
Sbjct: 295 GKLDEAESLFRNMSRRDVISWNTMISSYVQSNSCVEALETLGQLLQTDEGPPNSMTFSSA 354

Query: 419 LSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSE 478
           L AC+   A+  G+ +H ++  R+ ++ + +  +L+ MY+KC ++ +   +F+ M     
Sbjct: 355 LGACSSPEALMNGRTIHAMILQRSLQNVLLIGNSLLTMYSKCNSMEDTERVFESMPCYDV 414

Query: 479 VTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAG 527
           V+ N +  GY        A+++FS M  +GI+P+ +T +++   C   G
Sbjct: 415 VSCNVLTGGYAALEDVANAMRVFSWMRGTGIKPNYITMINLQGTCKSLG 463



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 62/244 (25%), Positives = 118/244 (48%), Gaps = 1/244 (0%)

Query: 333 IHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGL 392
           IH+   ++G++ N  + TAL  +Y     +  A++LF E  ++++ SW A++   + NG 
Sbjct: 66  IHALTHRAGLMGNVYIGTALLHLYGSRGLVLNAQRLFWEMPQRNVVSWTAIMVALSSNGC 125

Query: 393 TEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTA 452
            EEA+  ++ M+   V  N   +++++S C  L     G  V   V      +++ V+ +
Sbjct: 126 MEEALVAYRRMRKEGVMCNANALATVVSLCGALEDEVAGLQVTAHVVVSGLLTHVSVANS 185

Query: 453 LIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPS 512
           LI M+     + +A  LFD M  +  ++WN MIS Y       +   + S+M H  ++P 
Sbjct: 186 LITMFGNLRRVQDAERLFDRMEERDRISWNAMISMYSHEEVYSKCFIVLSDMRHGEVKPD 245

Query: 513 GVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFI 572
             T  S++  C+ + LV  G  I  S+    G          +V++   AG+L++A    
Sbjct: 246 VTTLCSLVSVCASSDLVALGSGI-HSLCVSSGLHCSVPLINALVNMYSTAGKLDEAESLF 304

Query: 573 KGLA 576
           + ++
Sbjct: 305 RNMS 308



 Score = 63.2 bits (152), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 37/152 (24%), Positives = 72/152 (47%), Gaps = 3/152 (1%)

Query: 375 KSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLG---AISLG 431
           ++ +SW   ++G  + GL   A +L + M+   V  +   ++S+++AC   G     + G
Sbjct: 4   RTSSSWYTAVSGCARCGLESTAFTLLRVMRERDVPLSGFALASLVTACEHRGWQEGAACG 63

Query: 432 KWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLH 491
             +H L        N+Y+ TAL+ +Y   G ++ A+ LF  M  ++ V+W  ++     +
Sbjct: 64  AAIHALTHRAGLMGNVYIGTALLHLYGSRGLVLNAQRLFWEMPQRNVVSWTAIMVALSSN 123

Query: 492 GHGLEALQLFSEMLHSGIRPSGVTFLSVLYAC 523
           G   EAL  +  M   G+  +     +V+  C
Sbjct: 124 GCMEEALVAYRRMRKEGVMCNANALATVVSLC 155


>gi|225457243|ref|XP_002281020.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Vitis vinifera]
          Length = 580

 Score =  419 bits (1076), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 221/589 (37%), Positives = 334/589 (56%), Gaps = 25/589 (4%)

Query: 208 LDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLV--SFYSKCGEVERAE 265
           LD  S+ A +     V +L+    IQ   ++       ++ + L+  S  +  G V  A 
Sbjct: 5   LDQGSLVAAIKRCTRVGDLK---AIQAHMVRANLTQDTFLTSKLIESSAVTLSGHVAYAH 61

Query: 266 LLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFG 325
            +F     P+L   N +I GY+ +    +++ L+R +           + G+ P  Y FG
Sbjct: 62  RIFSCTHHPNLFMWNTIIRGYSISDSPITAIALYRDMF----------LCGISPNSYTFG 111

Query: 326 HLHLTNC----------IHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEK 375
            +    C          +HS  +K G+   + ++  L  +Y+    M+ A  +FDE  E 
Sbjct: 112 FVLKACCKLLRLCEGQELHSQIVKVGLDFETPLVNGLIKLYAACGCMDYACVMFDEMPEP 171

Query: 376 SLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVH 435
             ASW+ M++GY QNG   EA+ LF+EMQA  V+ +  T++S++  C  LGA+ LGKWVH
Sbjct: 172 DSASWSTMVSGYAQNGQAVEALKLFREMQAENVSSDAFTLASVVGVCGDLGALDLGKWVH 231

Query: 436 ELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGL 495
             +     + ++ + TAL+ MY+KCG++  A ++F  M+ +    W+TMI+GY +HGHG 
Sbjct: 232 SYMDKEGVKIDVVLGTALVGMYSKCGSLDNALKVFQGMAERDVTAWSTMIAGYAIHGHGE 291

Query: 496 EALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACM 555
           +ALQLF  M  S   P+ VTF SVL ACSH+GLV +G +IF++M  ++   P  +HY CM
Sbjct: 292 KALQLFDAMKRSKTIPNCVTFTSVLSACSHSGLVEKGHQIFETMWTEYKITPQIKHYGCM 351

Query: 556 VDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENV 615
           VD+  RAG +  A +FI+ + +EP   +W  LLGAC  H   +L    S K+ +LDP + 
Sbjct: 352 VDLFCRAGMVGHAHKFIQTMPIEPNVVLWRTLLGACKTHGYKDLGEHISRKILKLDPSSP 411

Query: 616 GYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQST 675
             +VL+SN+Y++   +     VR ++K +   K  G + IE+    H F  GD+ HP+  
Sbjct: 412 ENYVLVSNVYASLGRWSSVCQVRSLMKDKAPKKQHGWSSIEINFMVHKFIMGDESHPERE 471

Query: 676 AIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEI 735
            IY ML ++  K+++ G    TV  LHD++EEEKE  + +HSE+LAIA+GL+ T  G+ I
Sbjct: 472 KIYGMLHQMARKLKQVGHVNSTVDVLHDIDEEEKEYALGLHSERLAIAYGLLHTPNGSPI 531

Query: 736 RIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           RI+KNLRVC DCH   K IS+V  R I+VRD  RFHHF+   CSC DYW
Sbjct: 532 RIVKNLRVCRDCHEVIKLISEVYNREIIVRDRVRFHHFRERGCSCNDYW 580



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 106/437 (24%), Positives = 197/437 (45%), Gaps = 41/437 (9%)

Query: 59  YARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAA 118
           YA  +F     P+LF++N IIRG+S ++ P ++I  Y  +     ++P+++T+ FVL A 
Sbjct: 59  YAHRIFSCTHHPNLFMWNTIIRGYSISDSPITAIALYRDMFL-CGISPNSYTFGFVLKAC 117

Query: 119 SACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWN 178
                   G  LH   +  G   +  +   L+ LY     +  A  +FD+MPE D+  W+
Sbjct: 118 CKLLRLCEGQELHSQIVKVGLDFETPLVNGLIKLYAACGCMDYACVMFDEMPEPDSASWS 177

Query: 179 SMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLK 238
           +M+SG  +N    +++ +F +M     +  D+ ++A+V+    ++  L LG  +     K
Sbjct: 178 TMVSGYAQNGQAVEALKLFREMQAENVS-SDAFTLASVVGVCGDLGALDLGKWVHSYMDK 236

Query: 239 LGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRL 298
            G    V + T LV  YSKCG ++ A  +F+ +   D+ + + MI+GY  +G  E +L+L
Sbjct: 237 EGVKIDVVLGTALVGMYSKCGSLDNALKVFQGMAERDVTAWSTMIAGYAIHGHGEKALQL 296

Query: 299 FRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSR 358
           F  +  S    N  T   +           L+ C HS  ++ G      +   + T Y  
Sbjct: 297 FDAMKRSKTIPNCVTFTSV-----------LSACSHSGLVEKG----HQIFETMWTEYKI 341

Query: 359 LNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSI 418
             +++                +  M+  + + G+   A    Q M    + PN V   ++
Sbjct: 342 TPQIK---------------HYGCMVDLFCRAGMVGHAHKFIQTM---PIEPNVVLWRTL 383

Query: 419 LSACAQLGAISLGKWV-HELVKSRNFESNIYVSTALIDMYAKCG---NIVEARELFDLMS 474
           L AC   G   LG+ +  +++K        YV  +  ++YA  G   ++ + R L    +
Sbjct: 384 LGACKTHGYKDLGEHISRKILKLDPSSPENYVLVS--NVYASLGRWSSVCQVRSLMKDKA 441

Query: 475 HKSEVTWNTMISGYGLH 491
            K +  W+++   + +H
Sbjct: 442 PKKQHGWSSIEINFMVH 458



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 58/283 (20%), Positives = 126/283 (44%), Gaps = 12/283 (4%)

Query: 27  QTHAQIIIHGFQNDLSTVTKLAHRLSDFKATC----YARALFFSIPKPDLFLFNVIIRGF 82
           + H+QI+  G   +    T L + L    A C    YA  +F  +P+PD   ++ ++ G+
Sbjct: 128 ELHSQIVKVGLDFE----TPLVNGLIKLYAACGCMDYACVMFDEMPEPDSASWSTMVSGY 183

Query: 83  SNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSD 142
           + N     ++  +  ++    ++ D FT + V+          +G  +H +    G   D
Sbjct: 184 AQNGQAVEALKLFREMQAEN-VSSDAFTLASVVGVCGDLGALDLGKWVHSYMDKEGVKID 242

Query: 143 LFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVR 202
           + +G ALV +Y K   + +A KVF  M E+D   W++MI+G   +   + ++ +F D ++
Sbjct: 243 VVLGTALVGMYSKCGSLDNALKVFQGMAERDVTAWSTMIAGYAIHGHGEKALQLF-DAMK 301

Query: 203 NGGTWLDSTSVAAVLPAVAEVQELRLGMEI-QCLGLKLGFHDHVYVLTGLVSFYSKCGEV 261
              T  +  +  +VL A +    +  G +I + +  +      +     +V  + + G V
Sbjct: 302 RSKTIPNCVTFTSVLSACSHSGLVEKGHQIFETMWTEYKITPQIKHYGCMVDLFCRAGMV 361

Query: 262 ERAELLFRDI-VRPDLISCNAMISGYTCNGKTESSLRLFRQLL 303
             A    + + + P+++    ++     +G  +    + R++L
Sbjct: 362 GHAHKFIQTMPIEPNVVLWRTLLGACKTHGYKDLGEHISRKIL 404


>gi|449501934|ref|XP_004161498.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g13770, mitochondrial-like [Cucumis sativus]
          Length = 638

 Score =  419 bits (1076), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 213/572 (37%), Positives = 341/572 (59%), Gaps = 2/572 (0%)

Query: 215 AVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRP 274
           ++L      + +R G  +    +K  +   VY+ T L+  Y+KC  +  A  +F ++ + 
Sbjct: 67  SILNECVSQRAIREGQRVHTHMIKTCYLPSVYLRTRLIVLYNKCDCLGDARGMFDEMPQR 126

Query: 275 DLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIH 334
           +++S  AMIS Y+  G    +L LF ++L S    N  T   ++   Y          IH
Sbjct: 127 NVVSWTAMISAYSQRGFAFEALNLFVEMLRSDTEPNHFTFATILTSCYGSLGFETGRQIH 186

Query: 335 SFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTE 394
           S  +K    S+  V ++L  +Y++   +  A  +F    E+ + +  A+I+GY Q GL E
Sbjct: 187 SIAIKRNYESHMFVGSSLLDMYAKSGRICDAHGVFHCLPERDVVACTAIISGYAQMGLDE 246

Query: 395 EAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALI 454
           EA+ LF+++Q   +  N VT +S+L+A + L A++ GK VH  V      S + +  +LI
Sbjct: 247 EALKLFRQLQIEGMNSNSVTYASVLTALSGLAALNHGKQVHSHVLRSGQYSYVVLLNSLI 306

Query: 455 DMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSG-IRPSG 513
           DMY+KCGN+  AR +FD M  ++ ++WN M+ GY  HG   E L+LF  M     ++P  
Sbjct: 307 DMYSKCGNVCYARRIFDSMPERTCISWNAMLVGYSKHGMAREVLELFKLMREENKVKPDS 366

Query: 514 VTFLSVLYACSHAGLVREGDEIFQSMIH-DHGFKPLAEHYACMVDILGRAGQLEKALEFI 572
           +T+L+VL  CSH  L   G EIF +M++   G +P   HY C+VD+LGRAG++E+A +FI
Sbjct: 367 ITYLAVLSGCSHGQLEDMGLEIFYNMVNGKDGIEPDIGHYGCVVDLLGRAGRVEEAFDFI 426

Query: 573 KGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYL 632
           K +   P  A+WG+LLG+C +H D  +  +  +KL EL+PEN G +V+LSN+Y++   + 
Sbjct: 427 KKMPFVPTAAIWGSLLGSCRVHSDVEIGIIVGQKLLELEPENAGNYVILSNLYASAGKWE 486

Query: 633 QAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAG 692
               +R +++++ + K PG + +E+    H F + D  HP+   +   +++L+ K +E G
Sbjct: 487 DMRNIRDLMQEKAVTKEPGRSWVELDQIVHTFHASDHTHPRREEVANKVKELSIKFKEDG 546

Query: 693 FQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATK 752
           +  +    L+DV+EE+KE ++  HSEKLA+AFGLIAT  GT IR+IKNLR+C+DCH+  K
Sbjct: 547 YVPDLSCVLYDVDEEQKEKVLLGHSEKLALAFGLIATPEGTTIRVIKNLRICVDCHSFAK 606

Query: 753 FISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           F+S++  R +++RD NRFH+  GGVCSCGDYW
Sbjct: 607 FVSRLYARTVILRDKNRFHNIVGGVCSCGDYW 638



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 102/369 (27%), Positives = 189/369 (51%), Gaps = 5/369 (1%)

Query: 127 GVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMK 186
           G  +H H I + Y   +++   L+ LY K   +  AR +FD+MP+++ V W +MIS   +
Sbjct: 81  GQRVHTHMIKTCYLPSVYLRTRLIVLYNKCDCLGDARGMFDEMPQRNVVSWTAMISAYSQ 140

Query: 187 NCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVY 246
                +++ +F +M+R+  T  +  + A +L +         G +I  + +K  +  H++
Sbjct: 141 RGFAFEALNLFVEMLRS-DTEPNHFTFATILTSCYGSLGFETGRQIHSIAIKRNYESHMF 199

Query: 247 VLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASA 306
           V + L+  Y+K G +  A  +F  +   D+++C A+ISGY   G  E +L+LFRQL    
Sbjct: 200 VGSSLLDMYAKSGRICDAHGVFHCLPERDVVACTAIISGYAQMGLDEEALKLFRQLQIEG 259

Query: 307 ERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAAR 366
              NS T   ++        L+    +HS  L+SG  S   +L +L  +YS+   +  AR
Sbjct: 260 MNSNSVTYASVLTALSGLAALNHGKQVHSHVLRSGQYSYVVLLNSLIDMYSKCGNVCYAR 319

Query: 367 KLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEM-QASKVAPNPVTVSSILSACA-- 423
           ++FD   E++  SWNAM+ GY+++G+  E + LF+ M + +KV P+ +T  ++LS C+  
Sbjct: 320 RIFDSMPERTCISWNAMLVGYSKHGMAREVLELFKLMREENKVKPDSITYLAVLSGCSHG 379

Query: 424 QLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSH-KSEVTWN 482
           QL  + L  + + +      E +I     ++D+  + G + EA +    M    +   W 
Sbjct: 380 QLEDMGLEIFYNMVNGKDGIEPDIGHYGCVVDLLGRAGRVEEAFDFIKKMPFVPTAAIWG 439

Query: 483 TMISGYGLH 491
           +++    +H
Sbjct: 440 SLLGSCRVH 448



 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 107/422 (25%), Positives = 189/422 (44%), Gaps = 42/422 (9%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSI-CFYTHLRKNTALTPDNFTYSFVLSAA 118
           AR +F  +P+ ++  +  +I  +S       ++  F   LR +T   P++FT++ +L++ 
Sbjct: 116 ARGMFDEMPQRNVVSWTAMISAYSQRGFAFEALNLFVEMLRSDT--EPNHFTFATILTSC 173

Query: 119 SACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWN 178
                   G  +H  AI   Y S +FVG++L+D+Y K   +  A  VF  +PE+D V   
Sbjct: 174 YGSLGFETGRQIHSIAIKRNYESHMFVGSSLLDMYAKSGRICDAHGVFHCLPERDVVACT 233

Query: 179 SMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSV--AAVLPAVAEVQELRLGMEIQCLG 236
           ++ISG  +    ++++ +F  +   G   ++S SV  A+VL A++ +  L  G ++    
Sbjct: 234 AIISGYAQMGLDEEALKLFRQLQIEG---MNSNSVTYASVLTALSGLAALNHGKQVHSHV 290

Query: 237 LKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSL 296
           L+ G + +V +L  L+  YSKCG V  A  +F  +     IS NAM+ GY+ +G     L
Sbjct: 291 LRSGQYSYVVLLNSLIDMYSKCGNVCYARRIFDSMPERTCISWNAMLVGYSKHGMAREVL 350

Query: 297 RLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVY 356
            LF+ L+    +V   +I  L           L+ C H      G          L   Y
Sbjct: 351 ELFK-LMREENKVKPDSITYLAV---------LSGCSHGQLEDMG----------LEIFY 390

Query: 357 SRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVS 416
           + +N  +          E  +  +  ++    + G  EEA    ++M      P      
Sbjct: 391 NMVNGKDGI--------EPDIGHYGCVVDLLGRAGRVEEAFDFIKKM---PFVPTAAIWG 439

Query: 417 SILSACAQLGAISLGKWV-HELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSH 475
           S+L +C     + +G  V  +L++     +  YV   L ++YA  G   + R + DLM  
Sbjct: 440 SLLGSCRVHSDVEIGIIVGQKLLELEPENAGNYV--ILSNLYASAGKWEDMRNIRDLMQE 497

Query: 476 KS 477
           K+
Sbjct: 498 KA 499



 Score = 82.4 bits (202), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 60/240 (25%), Positives = 111/240 (46%), Gaps = 3/240 (1%)

Query: 27  QTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNE 86
           Q H+  I   +++ +   + L    +     C A  +F  +P+ D+     II G++   
Sbjct: 184 QIHSIAIKRNYESHMFVGSSLLDMYAKSGRICDAHGVFHCLPERDVVACTAIISGYAQMG 243

Query: 87  MPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVG 146
           + + ++  +  L+    +  ++ TY+ VL+A S     + G  +H H + SG  S + + 
Sbjct: 244 LDEEALKLFRQLQIE-GMNSNSVTYASVLTALSGLAALNHGKQVHSHVLRSGQYSYVVLL 302

Query: 147 AALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGT 206
            +L+D+Y K   V  AR++FD MPE+  + WN+M+ G  K+   ++ + +F  M      
Sbjct: 303 NSLIDMYSKCGNVCYARRIFDSMPERTCISWNAMLVGYSKHGMAREVLELFKLMREENKV 362

Query: 207 WLDSTSVAAVLPAVAEVQELRLGMEI--QCLGLKLGFHDHVYVLTGLVSFYSKCGEVERA 264
             DS +  AVL   +  Q   +G+EI    +  K G    +     +V    + G VE A
Sbjct: 363 KPDSITYLAVLSGCSHGQLEDMGLEIFYNMVNGKDGIEPDIGHYGCVVDLLGRAGRVEEA 422



 Score = 56.6 bits (135), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 42/172 (24%), Positives = 78/172 (45%), Gaps = 3/172 (1%)

Query: 13  LSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDL 72
           L+ L G    +   Q H+ ++  G  + +  +  L    S     CYAR +F S+P+   
Sbjct: 271 LTALSGLAALNHGKQVHSHVLRSGQYSYVVLLNSLIDMYSKCGNVCYARRIFDSMPERTC 330

Query: 73  FLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHG 132
             +N ++ G+S + M +  +  +  +R+   + PD+ TY  VLS  S      +G+ +  
Sbjct: 331 ISWNAMLVGYSKHGMAREVLELFKLMREENKVKPDSITYLAVLSGCSHGQLEDMGLEIFY 390

Query: 133 HAIVSGYGSDLFVG--AALVDLYFKFSWVKSARKVFDKMPEKDT-VLWNSMI 181
           + +    G +  +G    +VDL  +   V+ A     KMP   T  +W S++
Sbjct: 391 NMVNGKDGIEPDIGHYGCVVDLLGRAGRVEEAFDFIKKMPFVPTAAIWGSLL 442


>gi|359485832|ref|XP_002268817.2| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g09950 [Vitis vinifera]
          Length = 1736

 Score =  419 bits (1076), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 259/770 (33%), Positives = 416/770 (54%), Gaps = 16/770 (2%)

Query: 25   LTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSN 84
            L Q  A++   GF  DL   + L    + F  T  A+ +F  +   ++   N ++ G   
Sbjct: 301  LEQMLARVEKSGFLQDLYVSSALVSGFARFGLTDDAKNIFEQMGVRNVVSMNGLMVGLVK 360

Query: 85   NEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACC----DRSIGVLLHGHAIVSGYG 140
             +  +++   +  ++    +  D  +Y  +LSA S        R  G  +H H I +G  
Sbjct: 361  QKQGEAAAKVFHEMKDLVGINSD--SYVVLLSAFSEFSVLEEGRRKGREVHAHVIRTGLN 418

Query: 141  SD-LFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGD 199
             + + +G  LV++Y K   +  A  VF+ M EKD+V WNS+ISGL +N C +D+   F  
Sbjct: 419  DNKVAIGNGLVNMYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAESFHR 478

Query: 200  MVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCG 259
            M R  G+   + ++ + L + A +  + LG +I C GLKLG    V V   L++ Y++ G
Sbjct: 479  M-RRTGSMPSNFTLISTLSSCASLGWIMLGEQIHCDGLKLGLDTDVSVSNALLALYAETG 537

Query: 260  EVERAELLFRDIVRPDLISCNAMISGYT-CNGKTESSLRLFRQLLASAERVNSSTIVGLI 318
                   +F  +   D +S N++I   +        +++ F Q++     ++  T + ++
Sbjct: 538  CFTECLKVFSLMPEYDQVSWNSVIGALSDSEASVSQAVKYFLQMMRGGWGLSRVTFINIL 597

Query: 319  PVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSE-KSL 377
                      +++ IH+  LK  +  ++++  AL + Y +  EM    K+F   SE +  
Sbjct: 598  SAVSSLSLHEVSHQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDE 657

Query: 378  ASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHEL 437
             SWN+MI+GY  N L  +A+ L   M       +  T ++ILSACA +  +  G  VH  
Sbjct: 658  VSWNSMISGYIHNELLHKAMDLVWFMMQKGQRLDSFTFATILSACASVATLERGMEVHAC 717

Query: 438  VKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEA 497
                  ES++ V +AL+DMY+KCG I  A   F+LM  ++  +WN+MISGY  HGHG +A
Sbjct: 718  GIRACLESDVVVGSALVDMYSKCGRIDYASRFFELMPLRNVYSWNSMISGYARHGHGEKA 777

Query: 498  LQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVD 557
            L+LF+ M+  G  P  VTF+ VL ACSH G V EG E F+SM   +   P  EH++CMVD
Sbjct: 778  LKLFTRMMLDGQPPDHVTFVGVLSACSHVGFVEEGFEHFKSMSEVYRLSPRVEHFSCMVD 837

Query: 558  ILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIH--KDTNLARVASEKLFELDPENV 615
            +LGRAG+L++  +FI  + ++P   +W  +LGAC     ++T L R A+E L EL+P+N 
Sbjct: 838  LLGRAGKLDEVGDFINSMPMKPNVLIWRTVLGACCRANGRNTELGRRAAEMLLELEPQNA 897

Query: 616  GYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQST 675
              +VLL+N+Y++   +   A  R  +K+  + K  GC+ + +    HVF +GD+LHP+  
Sbjct: 898  VNYVLLANMYASGEKWEDVAKARTAMKEAAVKKEAGCSWVTMKDGVHVFVAGDKLHPEKD 957

Query: 676  AIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEI 735
             IY  L +LN KMR+AG+  +T  AL D+E E KE ++  HSEK+A+AF ++  +    I
Sbjct: 958  LIYDKLRELNRKMRDAGYIPQTKYALFDLELENKEELLSYHSEKIAVAF-VLTRQSALPI 1016

Query: 736  RIIKNLRVCLDCHTATKFISKVTGRVI--VVRDANRFHHFKGGVCSCGDY 783
            RI+KNLRVC DCH+A  +ISK+    +   ++ +N     +   C CGD+
Sbjct: 1017 RIMKNLRVCGDCHSAFGYISKIIFFFLKMAMKPSNNI-WIRRQQCPCGDW 1065



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 134/497 (26%), Positives = 227/497 (45%), Gaps = 35/497 (7%)

Query: 64  FFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRK-----NTALTPDNFTYSFVLSAA 118
           F + P P L   +++ +  + N+  KS      H +      NT L   + T+  +++  
Sbjct: 24  FTASPFPPLK--SLLFKPLNPNQCTKSLQDLVDHYKTSTSHCNTTLFSSSETFESLINRY 81

Query: 119 SACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWN 178
              C       LH  +I  G+  +LF+   L+++Y +   + SA+K+FD+M  ++ V W 
Sbjct: 82  QGSCCSEEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWA 141

Query: 179 SMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEV--QELRLGMEIQCLG 236
            +ISG  +N    ++   F DMVR  G   +  +  + L A  E      +LG++I  L 
Sbjct: 142 CLISGYTQNGKPDEACARFRDMVR-AGFIPNHYAFGSALRACQESGPSGCKLGVQIHGLI 200

Query: 237 LKLGFHDHVYVLTGLVSFYSKC-GEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESS 295
            K  +   V V   L+S Y  C      A  +F  I   + IS N++IS Y+  G   S+
Sbjct: 201 SKTRYGSDVVVCNVLISMYGSCLDSANDARSVFDGIGIRNSISWNSIISVYSRRGDAVSA 260

Query: 296 LRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIH---SFCL---------KSGIV 343
             LF  +    E +  S      P  Y FG L  T C       C+         KSG +
Sbjct: 261 YDLFSSM--QKEGLGFS----FKPNEYTFGSLITTACSSVDFGLCVLEQMLARVEKSGFL 314

Query: 344 SNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEM 403
            +  V +AL + ++R    + A+ +F++   +++ S N ++ G  +    E A  +F EM
Sbjct: 315 QDLYVSSALVSGFARFGLTDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEAAAKVFHEM 374

Query: 404 QASKVAPNPVTVSSILSACAQLGAIS----LGKWVHELVKSRNFESN-IYVSTALIDMYA 458
           +   V  N  +   +LSA ++   +      G+ VH  V       N + +   L++MYA
Sbjct: 375 K-DLVGINSDSYVVLLSAFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYA 433

Query: 459 KCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLS 518
           K G I +A  +F+LM  K  V+WN++ISG   +    +A + F  M  +G  PS  T +S
Sbjct: 434 KSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAESFHRMRRTGSMPSNFTLIS 493

Query: 519 VLYACSHAGLVREGDEI 535
            L +C+  G +  G++I
Sbjct: 494 TLSSCASLGWIMLGEQI 510



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 87/298 (29%), Positives = 143/298 (47%), Gaps = 8/298 (2%)

Query: 333 IHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGL 392
           +H   +K G V N  +   L  +Y R+ ++ +A+KLFDE S ++L +W  +I+GYTQNG 
Sbjct: 93  LHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISGYTQNGK 152

Query: 393 TEEAISLFQEMQASKVAPNPVTVSSILSACAQLG--AISLGKWVHELVKSRNFESNIYVS 450
            +EA + F++M  +   PN     S L AC + G     LG  +H L+    + S++ V 
Sbjct: 153 PDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKLGVQIHGLISKTRYGSDVVVC 212

Query: 451 TALIDMYAKC-GNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGI 509
             LI MY  C  +  +AR +FD +  ++ ++WN++IS Y   G  + A  LFS M   G+
Sbjct: 213 NVLISMYGSCLDSANDARSVFDGIGIRNSISWNSIISVYSRRGDAVSAYDLFSSMQKEGL 272

Query: 510 ----RPSGVTFLSVL-YACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQ 564
               +P+  TF S++  ACS         E   + +   GF       + +V    R G 
Sbjct: 273 GFSFKPNEYTFGSLITTACSSVDFGLCVLEQMLARVEKSGFLQDLYVSSALVSGFARFGL 332

Query: 565 LEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLS 622
            + A    + + V    ++ G ++G     +    A+V  E    +   +  Y VLLS
Sbjct: 333 TDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEAAAKVFHEMKDLVGINSDSYVVLLS 390


>gi|222625907|gb|EEE60039.1| hypothetical protein OsJ_12814 [Oryza sativa Japonica Group]
          Length = 852

 Score =  419 bits (1076), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 229/676 (33%), Positives = 379/676 (56%), Gaps = 4/676 (0%)

Query: 18  GAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNV 77
           GA    +L    A+ +  G   D+   + L    ++      AR +F  + + D  L+NV
Sbjct: 160 GAIALGRLVHRTARTL--GLDGDMFVGSALIKMYANGGLLWDARQVFDGMAERDCVLWNV 217

Query: 78  IIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVS 137
           ++ G+       S++  +  +R  +   P+  T +  LS ++   D   GV LH  A+  
Sbjct: 218 MMDGYVKAGSVSSAVELFGDMRA-SGCEPNFATLACFLSVSATESDLFFGVQLHTLAVKY 276

Query: 138 GYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVF 197
           G  S++ V   LV +Y K   +    K+F  MP  D V WN MISG ++N     ++ +F
Sbjct: 277 GLESEVAVANTLVSMYAKCKCLDDGWKLFGLMPRDDLVTWNGMISGCVQNGFVDQALLLF 336

Query: 198 GDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSK 257
            DM +  G   DS ++ ++LPA+ ++     G E+    ++   H  V++++ LV  Y K
Sbjct: 337 CDM-QKSGIRPDSVTLVSLLPALTDLNGFNQGKELHGYIVRNCVHMDVFLVSALVDIYFK 395

Query: 258 CGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGL 317
           C  V  A+ ++      D++  + MISGY  NG ++ ++++FR LL    R N+  I  +
Sbjct: 396 CRAVRMAQSVYDSSKAIDVVIGSTMISGYVLNGMSQEAVKMFRYLLEQGIRPNAVAIASV 455

Query: 318 IPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSL 377
           +P       + L   +HS+ LK+       V +AL  +Y++   ++ +  +F + S K  
Sbjct: 456 LPACASMAAMKLGQELHSYALKNAYEGRCYVESALMDMYAKCGRLDLSHYIFSKISAKDE 515

Query: 378 ASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHEL 437
            +WN+MI+ + QNG  EEA++LF+EM    V  + VT+SS+LSACA L AI  GK +H +
Sbjct: 516 VTWNSMISSFAQNGEPEEALNLFREMCMEGVKYSNVTISSVLSACASLPAIYYGKEIHGV 575

Query: 438 VKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEA 497
           V      ++++  +ALIDMY KCGN+  A  +F+ M  K+EV+WN++I+ YG +G   E+
Sbjct: 576 VIKGPIRADLFAESALIDMYGKCGNLEWAHRVFESMPEKNEVSWNSIIASYGAYGLVKES 635

Query: 498 LQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVD 557
           + L   M   G +   VTFL+++ AC+HAG V+EG  +F+ M  ++   P  EH+ACMVD
Sbjct: 636 VSLLRHMQEEGFKADHVTFLALVSACAHAGQVQEGLRLFRCMTEEYQIAPRMEHFACMVD 695

Query: 558 ILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGY 617
           +  RAG+L+KA+E I  +  +P   +WGALL AC +H++  LA +AS++LF+LDP N GY
Sbjct: 696 LYSRAGKLDKAMELIVDMPFKPDAGIWGALLHACRVHRNVELAEIASQELFKLDPHNSGY 755

Query: 618 HVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAI 677
           +VL+SNI +    +   + VR+++K  K+ K PG + ++V  T H+F + D+ HP S  I
Sbjct: 756 YVLMSNINAVAGRWDGVSKVRRLMKDTKVQKIPGYSWVDVNNTSHLFVAADKSHPDSEDI 815

Query: 678 YAMLEKLNGKMREAGF 693
           Y  L+ +  ++RE G+
Sbjct: 816 YMSLKSILLELREEGY 831



 Score =  290 bits (743), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 192/624 (30%), Positives = 319/624 (51%), Gaps = 29/624 (4%)

Query: 6   PQSRNLFLSLLKGAKTQSQLT---QTHAQIIIHGF-------QNDLSTVTKLAHRLSDFK 55
           P  R   L++L+G  + S L+   Q H + +  G        Q  L  +  LA R  D  
Sbjct: 38  PDRR--LLAVLRGCVSPSHLSLGLQVHGRAVTAGLHATDTALQTRLVGMYVLARRFRD-- 93

Query: 56  ATCYARALFFSIPKPDL---FLFNVIIRGFSNNEMPKSSICFYTHLRKN-TALTPDNFTY 111
               A A+F S+P+        +N +IRG +     +S++ FY  +  + +A  PD+ T+
Sbjct: 94  ----AVAVFSSLPRGAAACALPWNWLIRGLTMAGDYRSALLFYLKMWAHPSAPLPDSHTF 149

Query: 112 SFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPE 171
            +V+ + +A    ++G L+H  A   G   D+FVG+AL+ +Y     +  AR+VFD M E
Sbjct: 150 PYVVKSCAALGAIALGRLVHRTARTLGLDGDMFVGSALIKMYANGGLLWDARQVFDGMAE 209

Query: 172 KDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGME 231
           +D VLWN M+ G +K      ++ +FGDM R  G   +  ++A  L   A   +L  G++
Sbjct: 210 RDCVLWNVMMDGYVKAGSVSSAVELFGDM-RASGCEPNFATLACFLSVSATESDLFFGVQ 268

Query: 232 IQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGK 291
           +  L +K G    V V   LVS Y+KC  ++    LF  + R DL++ N MISG   NG 
Sbjct: 269 LHTLAVKYGLESEVAVANTLVSMYAKCKCLDDGWKLFGLMPRDDLVTWNGMISGCVQNGF 328

Query: 292 TESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTA 351
            + +L LF  +  S  R +S T+V L+P        +    +H + +++ +  +  +++A
Sbjct: 329 VDQALLLFCDMQKSGIRPDSVTLVSLLPALTDLNGFNQGKELHGYIVRNCVHMDVFLVSA 388

Query: 352 LSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPN 411
           L  +Y +   +  A+ ++D S    +   + MI+GY  NG+++EA+ +F+ +    + PN
Sbjct: 389 LVDIYFKCRAVRMAQSVYDSSKAIDVVIGSTMISGYVLNGMSQEAVKMFRYLLEQGIRPN 448

Query: 412 PVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFD 471
            V ++S+L ACA + A+ LG+ +H       +E   YV +AL+DMYAKCG +  +  +F 
Sbjct: 449 AVAIASVLPACASMAAMKLGQELHSYALKNAYEGRCYVESALMDMYAKCGRLDLSHYIFS 508

Query: 472 LMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVRE 531
            +S K EVTWN+MIS +  +G   EAL LF EM   G++ S VT  SVL AC+    +  
Sbjct: 509 KISAKDEVTWNSMISSFAQNGEPEEALNLFREMCMEGVKYSNVTISSVLSACASLPAIYY 568

Query: 532 GDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGAC 591
           G EI   +I       L    A ++D+ G+ G LE A    + +  E     W +++ + 
Sbjct: 569 GKEIHGVVIKGPIRADLFAESA-LIDMYGKCGNLEWAHRVFESMP-EKNEVSWNSIIASY 626

Query: 592 ----MIHKDTNLARVASEKLFELD 611
               ++ +  +L R   E+ F+ D
Sbjct: 627 GAYGLVKESVSLLRHMQEEGFKAD 650


>gi|218197313|gb|EEC79740.1| hypothetical protein OsI_21088 [Oryza sativa Indica Group]
          Length = 1068

 Score =  419 bits (1076), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 258/756 (34%), Positives = 389/756 (51%), Gaps = 10/756 (1%)

Query: 27   QTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNE 86
            + H   +  GF  D++    L    +       A  +F  +   D   +  +I G+  N 
Sbjct: 319  EMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGYEKNG 378

Query: 87   MPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVG 146
             P  ++  Y  +  +  + PD+ T +  L+A +      +G+ LH  A   G+   + V 
Sbjct: 379  FPDKALEVYALMELHN-VNPDDVTIASALAACACLGRLDVGIKLHELAQNKGFIRYVVVA 437

Query: 147  AALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGT 206
             AL+++Y K   +  A +VF  M EKD V W+SMI+G   N    D+++ F  M+  G  
Sbjct: 438  NALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFDALYYFRYML--GHV 495

Query: 207  WLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAEL 266
              +S +  A L A A    LR G EI    L+ G     YV   L+  Y KCG+   A  
Sbjct: 496  KPNSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQTSYAWA 555

Query: 267  LFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGH 326
             F      D++S N M+SG+  +G  + +L LF Q++ ++  +        +      G 
Sbjct: 556  QFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMMYTS--LGRMGACSALAACACLGR 613

Query: 327  LHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAG 386
            L +   +H      G +    V  AL  +Y++   ++ A ++F   +EK + SW++MIAG
Sbjct: 614  LDVGIKLHELAQNKGFIRYVVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAG 673

Query: 387  YTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESN 446
            +  N  + +A+  F+ M    V PN VT  + LSACA  GA+  GK +H  V      S 
Sbjct: 674  FCFNHRSFDALYYFRYMLG-HVKPNSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSE 732

Query: 447  IYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLH 506
             YV  AL+D+Y KCG    A   F + S K  V+WN M+SG+  HG G  AL LF++M+ 
Sbjct: 733  GYVPNALLDLYVKCGQTSYAWAQFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMVE 792

Query: 507  SGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLE 566
             G  P  VTF+ ++ ACS AG+V +G E+F          P  +HYACMVD+L R G+L 
Sbjct: 793  MGEHPDEVTFV-LMCACSRAGMVIQGWELFHRRTEKFSIVPNLKHYACMVDLLSRVGKLT 851

Query: 567  KALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYS 626
            +A   I  + ++P  AVWGALL  C IH+   L  +A++ + EL+P +V YHVLL ++Y+
Sbjct: 852  EAYNLINRMPIKPDAAVWGALLNGCRIHRHVELGELAAKVILELEPNDVAYHVLLCDLYT 911

Query: 627  AERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNG 686
                + Q A VR+ ++++ L +  GC+ +EV G  H F + D+ HPQ   I  +L  +  
Sbjct: 912  DAGKWAQVARVRKTMREKGLEQDNGCSWVEVKGVTHAFLTDDESHPQIKEINVVLHGIYE 971

Query: 687  KMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLD 746
            +M+  GF    V +L D E  E +++   HSE+LA+AFGLI T PGT I + KN   C  
Sbjct: 972  RMKACGFA--PVESLEDKEVSEDDILCG-HSERLAVAFGLINTTPGTTISVTKNRYTCQS 1028

Query: 747  CHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGD 782
            CH   K IS++  R I VRD  + H FK G CSCGD
Sbjct: 1029 CHVIFKAISEIVRREITVRDTKQLHCFKDGDCSCGD 1064



 Score =  221 bits (564), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 139/430 (32%), Positives = 230/430 (53%), Gaps = 11/430 (2%)

Query: 143 LFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVR 202
           L +G A++ +  +F  +  A +VF KMPE+D   WN M+ G  K    ++++ ++  M+ 
Sbjct: 131 LRLGNAMLSMLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLW 190

Query: 203 NGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVE 262
             G   D  +   VL     + + R+G E+    L+ GF D V VL  LV+ Y+KCG++ 
Sbjct: 191 -AGMRPDVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIV 249

Query: 263 RAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFY 322
            A  +F  +   D IS NAMI+G+  N + E+ L LF  +L +  + N  TI  +     
Sbjct: 250 AARKVFDGMAMTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASG 309

Query: 323 PFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNA 382
               +     +H F +K G   + +   +L  +Y+ L  M  A K+F     K   SW A
Sbjct: 310 MLSEVGFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTA 369

Query: 383 MIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRN 442
           MI+GY +NG  ++A+ ++  M+   V P+ VT++S L+ACA LG + +G  +HEL +++ 
Sbjct: 370 MISGYEKNGFPDKALEVYALMELHNVNPDDVTIASALAACACLGRLDVGIKLHELAQNKG 429

Query: 443 FESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFS 502
           F   + V+ AL++MYAK  +I +A E+F  M+ K  V+W++MI+G+  +    +AL  F 
Sbjct: 430 FIRYVVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFDALYYFR 489

Query: 503 EMLHSGIRPSGVTFLSVLYACSHAGLVREGDEI----FQSMIHDHGFKPLAEHYACMVDI 558
            ML   ++P+ VTF++ L AC+  G +R G EI     +  I   G+ P A     ++D+
Sbjct: 490 YML-GHVKPNSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNA-----LLDL 543

Query: 559 LGRAGQLEKA 568
             + GQ   A
Sbjct: 544 YVKCGQTSYA 553



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 157/573 (27%), Positives = 270/573 (47%), Gaps = 8/573 (1%)

Query: 51  LSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFT 110
           L  F    +A  +F  +P+ D+F +NV++ G+      + ++  Y  +     + PD +T
Sbjct: 141 LVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLW-AGMRPDVYT 199

Query: 111 YSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMP 170
           +  VL       D  +G  +H H +  G+G ++ V  ALV +Y K   + +ARKVFD M 
Sbjct: 200 FPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKVFDGMA 259

Query: 171 EKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGM 230
             D + WN+MI+G  +N   +  + +F  M+ N     +  ++ +V  A   + E+    
Sbjct: 260 MTDCISWNAMIAGHFENHECEAGLELFLTMLEN-EVQPNLMTITSVTVASGMLSEVGFAK 318

Query: 231 EIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNG 290
           E+    +K GF   V     L+  Y+  G +  A  +F  +   D +S  AMISGY  NG
Sbjct: 319 EMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGYEKNG 378

Query: 291 KTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLT 350
             + +L ++  +       +  TI   +      G L +   +H      G +    V  
Sbjct: 379 FPDKALEVYALMELHNVNPDDVTIASALAACACLGRLDVGIKLHELAQNKGFIRYVVVAN 438

Query: 351 ALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAP 410
           AL  +Y++   ++ A ++F   +EK + SW++MIAG+  N  + +A+  F+ M    V P
Sbjct: 439 ALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFDALYYFRYM-LGHVKP 497

Query: 411 NPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELF 470
           N VT  + LSACA  GA+  GK +H  V      S  YV  AL+D+Y KCG    A   F
Sbjct: 498 NSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQTSYAWAQF 557

Query: 471 DLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVR 530
            + S K  V+WN M+SG+  HG G  AL LF++M+++ +   G          +  G + 
Sbjct: 558 SVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMMYTSLGRMGACSALAAC--ACLGRLD 615

Query: 531 EGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALL-G 589
            G ++ + +  + GF         ++++  ++  ++KA+E  K +A E     W +++ G
Sbjct: 616 VGIKLHE-LAQNKGFIRYVVVANALLEMYAKSKHIDKAIEVFKFMA-EKDVVSWSSMIAG 673

Query: 590 ACMIHKDTNLARVASEKLFELDPENVGYHVLLS 622
            C  H+  +        L  + P +V +   LS
Sbjct: 674 FCFNHRSFDALYYFRYMLGHVKPNSVTFIAALS 706



 Score =  211 bits (536), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 158/547 (28%), Positives = 274/547 (50%), Gaps = 17/547 (3%)

Query: 27  QTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRG-FSNN 85
           + HA ++  GF +++  +  L    +       AR +F  +   D   +N +I G F N+
Sbjct: 218 EVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKVFDGMAMTDCISWNAMIAGHFENH 277

Query: 86  EMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFV 145
           E       F T L     + P+  T + V  A+    +      +HG A+  G+  D+  
Sbjct: 278 ECEAGLELFLTMLENE--VQPNLMTITSVTVASGMLSEVGFAKEMHGFAVKRGFAIDVAF 335

Query: 146 GAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGG 205
             +L+ +Y     +  A K+F +M  KD + W +MISG  KN     ++ V+  M  +  
Sbjct: 336 CNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGYEKNGFPDKALEVYALMELHNV 395

Query: 206 TWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAE 265
              D  ++A+ L A A +  L +G+++  L    GF  +V V   L+  Y+K   +++A 
Sbjct: 396 N-PDDVTIASALAACACLGRLDVGIKLHELAQNKGFIRYVVVANALLEMYAKSKHIDKAI 454

Query: 266 LLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFG 325
            +F+ +   D++S ++MI+G+  N ++  +L  FR +L    + NS T +  +      G
Sbjct: 455 EVFKFMAEKDVVSWSSMIAGFCFNHRSFDALYYFRYMLGHV-KPNSVTFIAALSACAATG 513

Query: 326 HLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIA 385
            L     IH++ L+ GI S   V  AL  +Y +  +   A   F   SEK + SWN M++
Sbjct: 514 ALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQTSYAWAQFSVHSEKDVVSWNIMLS 573

Query: 386 GYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFES 445
           G+  +GL + A+SLF +M  + +    +   S L+ACA LG + +G  +HEL +++ F  
Sbjct: 574 GFVAHGLGDIALSLFNQMMYTSLG--RMGACSALAACACLGRLDVGIKLHELAQNKGFIR 631

Query: 446 NIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEML 505
            + V+ AL++MYAK  +I +A E+F  M+ K  V+W++MI+G+  +    +AL  F  ML
Sbjct: 632 YVVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFDALYYFRYML 691

Query: 506 HSGIRPSGVTFLSVLYACSHAGLVREGDEI----FQSMIHDHGFKPLAEHYACMVDILGR 561
              ++P+ VTF++ L AC+  G +R G EI     +  I   G+ P A     ++D+  +
Sbjct: 692 -GHVKPNSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNA-----LLDLYVK 745

Query: 562 AGQLEKA 568
            GQ   A
Sbjct: 746 CGQTSYA 752



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 43/175 (24%), Positives = 75/175 (42%), Gaps = 1/175 (0%)

Query: 403 MQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGN 462
           +++S   P+     ++   C    A+  G        + +    + +  A++ M  + G 
Sbjct: 87  LESSPEPPDEGAYVALFRLCEWRRAVDAGMRACARADAEHPSFGLRLGNAMLSMLVRFGE 146

Query: 463 IVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYA 522
           I  A  +F  M  +   +WN M+ GYG  G   EAL L+  ML +G+RP   TF  VL  
Sbjct: 147 IWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAGMRPDVYTFPCVLRT 206

Query: 523 CSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAV 577
           C      R G E+   ++   GF    +    +V +  + G +  A +   G+A+
Sbjct: 207 CGGIPDWRMGREVHAHVLR-FGFGDEVDVLNALVTMYAKCGDIVAARKVFDGMAM 260


>gi|296081589|emb|CBI20594.3| unnamed protein product [Vitis vinifera]
          Length = 572

 Score =  418 bits (1075), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 211/523 (40%), Positives = 311/523 (59%), Gaps = 5/523 (0%)

Query: 259 GEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSS--TIVG 316
             V +A L+F  +  P++ + NA +     N     +++ F   ++S    N    T   
Sbjct: 38  ANVRQAALIFAHLASPNIFAHNATLKALAQNSHWFHAIQFFNHQVSSPNAPNPDEFTFTS 97

Query: 317 LIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDES--SE 374
           ++       H+     IH+   K G  SN  V  +L  +Y +   +  AR LFDE    +
Sbjct: 98  VLKACAGLAHVVNGQKIHAMVTKQGFESNLFVRNSLIDMYFKAGYLLLARHLFDEMFVRD 157

Query: 375 KSLASWNAMIAGYTQNGLTEEAISLFQEMQA-SKVAPNPVTVSSILSACAQLGAISLGKW 433
           +++  WNAMIAGY QN    +AI +F+ MQ    V PN VT+ S+L ACA LGA+ LGKW
Sbjct: 158 RNVVCWNAMIAGYAQNEKYSDAIEVFRMMQQFGGVVPNDVTLVSVLPACAHLGALDLGKW 217

Query: 434 VHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGH 493
           +   +  R     +++  AL DMYAKCG I EAR +F+ M  +  ++W+ +I G  ++GH
Sbjct: 218 IDGFISRREMALGLFLGNALADMYAKCGCITEARRVFNKMEERDVISWSIIICGLAMYGH 277

Query: 494 GLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYA 553
             EA   F EML  G +P+ V F+ +L AC+HAGLV++G   F +M  ++G  P  EHY 
Sbjct: 278 ADEAFGCFYEMLDCGEKPNDVVFMGLLTACTHAGLVKKGLNCFNTMDKEYGVSPKVEHYG 337

Query: 554 CMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPE 613
           C+VD+L RAG+L+KA + I  + ++P   +WGALLG C I++D+   +   + + ELD +
Sbjct: 338 CVVDLLSRAGELDKAEDMISSMPMKPNVIIWGALLGGCRIYRDSGRGQRVVQHILELDSD 397

Query: 614 NVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQ 673
           + G +V L+N+YS+      AA  R  +++  + K PGC+ IEV  T H F  GD  HP+
Sbjct: 398 HSGSYVYLANVYSSMGRLDDAAKCRLRMRENGVLKTPGCSWIEVDNTVHEFFMGDLSHPE 457

Query: 674 STAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGT 733
           S  IY+M+ +L  KM+ AG++ +T   +H ++EEEKE  + +HSEKLAIAFGLI+T  GT
Sbjct: 458 SNKIYSMIRELMWKMKLAGYKPKTDLVVHSIDEEEKEDALSIHSEKLAIAFGLISTSEGT 517

Query: 734 EIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGG 776
            IR++KNLR+C DCH A K IS +  R I+VRD +RFHHFK G
Sbjct: 518 TIRVVKNLRICNDCHDAAKIISGIVKREIIVRDRSRFHHFKDG 560



 Score =  135 bits (341), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 104/404 (25%), Positives = 182/404 (45%), Gaps = 28/404 (6%)

Query: 23  SQLTQTHAQIIIHGFQNDLSTVTKLAHRL----SDFKATCYARALFFSIPKPDLFLFNVI 78
           +Q+ Q  AQ+I     + +     +A +L    +D      A  +F  +  P++F  N  
Sbjct: 2   AQVLQIQAQLITSPIPSSVVDPNLIAVKLIGACADHANVRQAALIFAHLASPNIFAHNAT 61

Query: 79  IRGFSNNEMPKSSICFYTH-LRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVS 137
           ++  + N     +I F+ H +    A  PD FT++ VL A +       G  +H      
Sbjct: 62  LKALAQNSHWFHAIQFFNHQVSSPNAPNPDEFTFTSVLKACAGLAHVVNGQKIHAMVTKQ 121

Query: 138 GYGSDLFVGAALVDLYFKFSWVKSARKVFDKM--PEKDTVLWNSMISGLMKNCCFQDSIW 195
           G+ S+LFV  +L+D+YFK  ++  AR +FD+M   +++ V WN+MI+G  +N  + D+I 
Sbjct: 122 GFESNLFVRNSLIDMYFKAGYLLLARHLFDEMFVRDRNVVCWNAMIAGYAQNEKYSDAIE 181

Query: 196 VFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQ--------CLGLKLGFHDHVYV 247
           VF  M + GG   +  ++ +VLPA A +  L LG  I          LGL LG       
Sbjct: 182 VFRMMQQFGGVVPNDVTLVSVLPACAHLGALDLGKWIDGFISRREMALGLFLG------- 234

Query: 248 LTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAE 307
              L   Y+KCG +  A  +F  +   D+IS + +I G    G  + +   F ++L   E
Sbjct: 235 -NALADMYAKCGCITEARRVFNKMEERDVISWSIIICGLAMYGHADEAFGCFYEMLDCGE 293

Query: 308 RVNSSTIVGLIPVFYPFGHLHL-TNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAAR 366
           + N    +GL+      G +    NC ++   + G+         +  + SR  E++ A 
Sbjct: 294 KPNDVVFMGLLTACTHAGLVKKGLNCFNTMDKEYGVSPKVEHYGCVVDLLSRAGELDKAE 353

Query: 367 KLFDESSEK-SLASWNAMIAG---YTQNGLTEEAISLFQEMQAS 406
            +      K ++  W A++ G   Y  +G  +  +    E+ + 
Sbjct: 354 DMISSMPMKPNVIIWGALLGGCRIYRDSGRGQRVVQHILELDSD 397



 Score =  108 bits (271), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 68/203 (33%), Positives = 106/203 (52%), Gaps = 5/203 (2%)

Query: 338 LKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAI 397
           + S +V  + +   L    +    +  A  +F   +  ++ + NA +    QN     AI
Sbjct: 16  IPSSVVDPNLIAVKLIGACADHANVRQAALIFAHLASPNIFAHNATLKALAQNSHWFHAI 75

Query: 398 SLFQEMQASKVAPNP--VTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALID 455
             F    +S  APNP   T +S+L ACA L  +  G+ +H +V  + FESN++V  +LID
Sbjct: 76  QFFNHQVSSPNAPNPDEFTFTSVLKACAGLAHVVNGQKIHAMVTKQGFESNLFVRNSLID 135

Query: 456 MYAKCGNIVEARELFDLM--SHKSEVTWNTMISGYGLHGHGLEALQLFSEMLH-SGIRPS 512
           MY K G ++ AR LFD M    ++ V WN MI+GY  +    +A+++F  M    G+ P+
Sbjct: 136 MYFKAGYLLLARHLFDEMFVRDRNVVCWNAMIAGYAQNEKYSDAIEVFRMMQQFGGVVPN 195

Query: 513 GVTFLSVLYACSHAGLVREGDEI 535
            VT +SVL AC+H G +  G  I
Sbjct: 196 DVTLVSVLPACAHLGALDLGKWI 218



 Score = 76.6 bits (187), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 73/323 (22%), Positives = 141/323 (43%), Gaps = 9/323 (2%)

Query: 12  FLSLLKGAKTQSQLT---QTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALF--FS 66
           F S+LK     + +    + HA +   GF+++L     L            AR LF    
Sbjct: 95  FTSVLKACAGLAHVVNGQKIHAMVTKQGFESNLFVRNSLIDMYFKAGYLLLARHLFDEMF 154

Query: 67  IPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSI 126
           +   ++  +N +I G++ NE    +I  +  +++   + P++ T   VL A +      +
Sbjct: 155 VRDRNVVCWNAMIAGYAQNEKYSDAIEVFRMMQQFGGVVPNDVTLVSVLPACAHLGALDL 214

Query: 127 GVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMK 186
           G  + G          LF+G AL D+Y K   +  AR+VF+KM E+D + W+ +I GL  
Sbjct: 215 GKWIDGFISRREMALGLFLGNALADMYAKCGCITEARRVFNKMEERDVISWSIIICGLAM 274

Query: 187 NCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGME-IQCLGLKLGFHDHV 245
                ++   F +M+ + G   +      +L A      ++ G+     +  + G    V
Sbjct: 275 YGHADEAFGCFYEML-DCGEKPNDVVFMGLLTACTHAGLVKKGLNCFNTMDKEYGVSPKV 333

Query: 246 YVLTGLVSFYSKCGEVERAELLFRDI-VRPDLISCNAMISGYTCNGKTESSLRLFRQLLA 304
                +V   S+ GE+++AE +   + ++P++I   A++ G      +    R+ + +L 
Sbjct: 334 EHYGCVVDLLSRAGELDKAEDMISSMPMKPNVIIWGALLGGCRIYRDSGRGQRVVQHIL- 392

Query: 305 SAERVNSSTIVGLIPVFYPFGHL 327
             +  +S + V L  V+   G L
Sbjct: 393 ELDSDHSGSYVYLANVYSSMGRL 415


>gi|359495599|ref|XP_003635033.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59200, chloroplastic-like [Vitis vinifera]
          Length = 650

 Score =  418 bits (1075), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 226/607 (37%), Positives = 346/607 (57%), Gaps = 33/607 (5%)

Query: 208 LDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELL 267
           LD   + ++L     + ++   + I    ++ G     +++  L+   SKC  ++ A  +
Sbjct: 47  LDQKQIISLLQRSRHINQV---LPIHAQLIRNGHSQDPFMVFELLRSCSKCHAIDYASRI 103

Query: 268 FRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHL 327
           F+    P++    A+I G+  +G    +++L+ ++L  +   ++  +  ++        L
Sbjct: 104 FQYTHNPNVYLYTALIDGFVSSGNYLEAIQLYSRMLHESILPDNYLMASILKACGSQLAL 163

Query: 328 HLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLAS-------- 379
                +HS  LK G  SN  V   +  +Y +  E+  AR++F+E  E  +AS        
Sbjct: 164 REGREVHSRALKLGFSSNRLVRLRIMELYGKCGELGDARRVFEEMPEDVVASTVMISSYS 223

Query: 380 ----------------------WNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSS 417
                                 W AMI G+ +N  T  A+  F+ MQ   V PN  T+  
Sbjct: 224 DQGLVEEAGAVFSRVRRKDTVCWTAMIDGFVRNEETNRALEAFRGMQGENVRPNEFTIVC 283

Query: 418 ILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKS 477
           +LSAC+QLGA+ +G+WVH  ++    E N++V  ALI+MY++CG+I EA+ +FD M  + 
Sbjct: 284 VLSACSQLGALEIGRWVHSYMRKFEIELNLFVGNALINMYSRCGSIDEAQTVFDEMKDRD 343

Query: 478 EVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQ 537
            +T+NTMISG  ++G   +A++LF  M+   +RP+ VTF+ VL ACSH GLV  G EIF 
Sbjct: 344 VITYNTMISGLSMNGKSRQAIELFRVMVGRRLRPTNVTFVGVLNACSHGGLVDFGFEIFH 403

Query: 538 SMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDT 597
           SM  D+  +P  EHY CMVD+LGR G+LE+A + I+ + + P   + G LL AC +HK+ 
Sbjct: 404 SMARDYRVEPQIEHYGCMVDLLGRVGRLEEAYDLIRTMKMTPDHIMLGTLLSACKMHKNL 463

Query: 598 NLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEV 657
            L    +++L +    + G +VLLS++Y++   + +AA VR  +K+  + K PGC+ IEV
Sbjct: 464 ELGEQVAKELEDRGQADSGTYVLLSHVYASSGKWKEAAQVRAKMKEAGMQKEPGCSSIEV 523

Query: 658 GGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHS 717
               H F  GD  HPQ   IY  LE+LN  +R  G+  E    L D+E+ EKE  + +HS
Sbjct: 524 NNEIHEFLLGDLRHPQKERIYEKLEELNRLLRLEGYHPEKEVVLQDIEDGEKEWALAMHS 583

Query: 718 EKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGV 777
           E+LAI +GLI+TEP T IR++KNLRVC DCH+A K I+K+T R IVVRD NRFH+F+ G 
Sbjct: 584 ERLAICYGLISTEPCTMIRVMKNLRVCYDCHSAIKLIAKITRRKIVVRDRNRFHYFENGA 643

Query: 778 CSCGDYW 784
           CSCGDYW
Sbjct: 644 CSCGDYW 650



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 122/499 (24%), Positives = 223/499 (44%), Gaps = 69/499 (13%)

Query: 2   SMKTPQSRNLFLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYAR 61
           S+K+   + + +SLL+ ++  +Q+   HAQ+I +G   D   V +L    S   A  YA 
Sbjct: 43  SLKSLDQKQI-ISLLQRSRHINQVLPIHAQLIRNGHSQDPFMVFELLRSCSKCHAIDYAS 101

Query: 62  ALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASAC 121
            +F     P+++L+  +I GF ++     +I  Y+ +   + L PDN+  + +L A  + 
Sbjct: 102 RIFQYTHNPNVYLYTALIDGFVSSGNYLEAIQLYSRMLHESIL-PDNYLMASILKACGSQ 160

Query: 122 CDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPE---------- 171
                G  +H  A+  G+ S+  V   +++LY K   +  AR+VF++MPE          
Sbjct: 161 LALREGREVHSRALKLGFSSNRLVRLRIMELYGKCGELGDARRVFEEMPEDVVASTVMIS 220

Query: 172 --------------------KDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDST 211
                               KDTV W +MI G ++N     ++  F  M +      +  
Sbjct: 221 SYSDQGLVEEAGAVFSRVRRKDTVCWTAMIDGFVRNEETNRALEAFRGM-QGENVRPNEF 279

Query: 212 SVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDI 271
           ++  VL A +++  L +G  +     K     +++V   L++ YS+CG ++ A+ +F ++
Sbjct: 280 TIVCVLSACSQLGALEIGRWVHSYMRKFEIELNLFVGNALINMYSRCGSIDEAQTVFDEM 339

Query: 272 VRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTN 331
              D+I+ N MISG + NGK+  ++ LFR ++    R  + T VG+           L  
Sbjct: 340 KDRDVITYNTMISGLSMNGKSRQAIELFRVMVGRRLRPTNVTFVGV-----------LNA 388

Query: 332 CIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNG 391
           C H   +  G      +  +++  Y                 E  +  +  M+    + G
Sbjct: 389 CSHGGLVDFGF----EIFHSMARDY---------------RVEPQIEHYGCMVDLLGRVG 429

Query: 392 LTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSR-NFESNIYVS 450
             EEA  L + M   K+ P+ + + ++LSAC     + LG+ V + ++ R   +S  YV 
Sbjct: 430 RLEEAYDLIRTM---KMTPDHIMLGTLLSACKMHKNLELGEQVAKELEDRGQADSGTYV- 485

Query: 451 TALIDMYAKCGNIVEAREL 469
             L  +YA  G   EA ++
Sbjct: 486 -LLSHVYASSGKWKEAAQV 503


>gi|20197649|gb|AAM15176.1| putative selenium-binding protein [Arabidopsis thaliana]
          Length = 472

 Score =  418 bits (1075), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 207/475 (43%), Positives = 296/475 (62%), Gaps = 9/475 (1%)

Query: 312 STIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDE 371
           S I+  +PV  P       + +H+  +K+    +S+V TAL   Y +L ++E A K+F  
Sbjct: 5   SVILTALPVISP-------SEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSG 57

Query: 372 SSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGA-ISL 430
             +K + +W+AM+AGY Q G TE AI +F E+    + PN  T SSIL+ CA   A +  
Sbjct: 58  IDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQ 117

Query: 431 GKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGL 490
           GK  H        +S++ VS+AL+ MYAK GNI  A E+F     K  V+WN+MISGY  
Sbjct: 118 GKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQ 177

Query: 491 HGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAE 550
           HG  ++AL +F EM    ++  GVTF+ V  AC+HAGLV EG++ F  M+ D    P  E
Sbjct: 178 HGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKE 237

Query: 551 HYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFEL 610
           H +CMVD+  RAGQLEKA++ I+ +    G  +W  +L AC +HK T L R+A+EK+  +
Sbjct: 238 HNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAM 297

Query: 611 DPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQL 670
            PE+   +VLLSN+Y+   D+ + A VR+++ +R + K PG + IEV    + F +GD+ 
Sbjct: 298 KPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRS 357

Query: 671 HPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATE 730
           HP    IY  LE L+ ++++ G++ +T   L D+++E KE ++  HSE+LAIAFGLIAT 
Sbjct: 358 HPLKDQIYMKLEDLSTRLKDLGYEPDTSYVLQDIDDEHKEAVLAQHSERLAIAFGLIATP 417

Query: 731 PGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKG-GVCSCGDYW 784
            G+ + IIKNLRVC DCH   K I+K+  R IVVRD+NRFHHF   GVCSCGD+W
Sbjct: 418 KGSPLLIIKNLRVCGDCHLVIKLIAKIEEREIVVRDSNRFHHFSSDGVCSCGDFW 472



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 93/379 (24%), Positives = 171/379 (45%), Gaps = 58/379 (15%)

Query: 109 FTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDK 168
           FTYS +L+A        +    H   + + Y     VG AL+D Y K   V+ A KVF  
Sbjct: 2   FTYSVILTALPVISPSEV----HAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSG 57

Query: 169 MPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQ-ELR 227
           + +KD V W++M++G  +    + +I +FG++ + GG   +  + +++L   A     + 
Sbjct: 58  IDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTK-GGIKPNEFTFSSILNVCAATNASMG 116

Query: 228 LGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYT 287
            G +     +K      + V + L++ Y+K G +E AE +F+     DL+S N+MISGY 
Sbjct: 117 QGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYA 176

Query: 288 CNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSS 347
            +G+   +L +F+++     +++  T +G                + + C  +G+V    
Sbjct: 177 QHGQAMKALDVFKEMKKRKVKMDGVTFIG----------------VFAACTHAGLV---- 216

Query: 348 VLTALSTVYSRLNEMEAARKLFD----ESSEKSLASWNA-MIAGYTQNGLTEEAISLFQE 402
                          E   K FD    +         N+ M+  Y++ G  E+A+ + + 
Sbjct: 217 ---------------EEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIEN 261

Query: 403 MQASKVAPNPVTVS---SILSACAQLGAISLGKWVHE-LVKSRNFESNIYVSTALIDMYA 458
           M      PNP   +   +IL+AC       LG+   E ++  +  +S  YV   L +MYA
Sbjct: 262 M------PNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYV--LLSNMYA 313

Query: 459 KCGNIVEARELFDLMSHKS 477
           + G+  E  ++  LM+ ++
Sbjct: 314 ESGDWQERAKVRKLMNERN 332



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 65/254 (25%), Positives = 118/254 (46%), Gaps = 10/254 (3%)

Query: 26  TQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNN 85
           ++ HAQ++   ++   +  T L            A  +F  I   D+  ++ ++ G++  
Sbjct: 17  SEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQT 76

Query: 86  EMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASAC-CDRSIGVLLHGHAIVSGYGSDLF 144
              +++I  +  L K   + P+ FT+S +L+  +A       G   HG AI S   S L 
Sbjct: 77  GETEAAIKMFGELTKG-GIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLC 135

Query: 145 VGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNG 204
           V +AL+ +Y K   ++SA +VF +  EKD V WNSMISG  ++     ++ VF +M +  
Sbjct: 136 VSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEM-KKR 194

Query: 205 GTWLDSTSVAAVLPAVAE---VQELRLGMEIQCLGLKLG-FHDHVYVLTGLVSFYSKCGE 260
              +D  +   V  A      V+E     +I     K+    +H    + +V  YS+ G+
Sbjct: 195 KVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHN---SCMVDLYSRAGQ 251

Query: 261 VERAELLFRDIVRP 274
           +E+A  +  ++  P
Sbjct: 252 LEKAMKVIENMPNP 265


>gi|358343602|ref|XP_003635889.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|358344096|ref|XP_003636129.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355501824|gb|AES83027.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355502064|gb|AES83267.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 662

 Score =  418 bits (1075), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 237/657 (36%), Positives = 364/657 (55%), Gaps = 19/657 (2%)

Query: 130 LHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCC 189
           LH H + SG     F G  L+D Y K S +  ARK+FD+MP +  V WNSMIS  +    
Sbjct: 23  LHTHILKSGSLFSFF-GHKLIDGYIKCSVITEARKLFDEMPNRHIVTWNSMISSHVSRGK 81

Query: 190 FQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFH-DHVYVL 248
            +++I ++ +M+  G    D+ + +A+  A +E+   R G +   L + LGF     +V 
Sbjct: 82  TKEAIELYSNMLFEG-VLPDAYTFSAIFKAFSEMGVSREGQKAHGLAVVLGFEVSDGFVA 140

Query: 249 TGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAER 308
           TG+V  Y+K G+++ A  +F  ++  D++   A+I GY  +G    +L +F  ++ S  +
Sbjct: 141 TGIVDMYAKFGKMKDARFVFDRVLDKDVVLFTALIVGYNQHGLDGEALEVFEDMVGSRIK 200

Query: 309 VNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKL 368
            N  T+  ++      G L     IH   +K G+ S  +  T+L T+YS+ N +E + K+
Sbjct: 201 PNEYTLASVLVSCGNLGDLVNGKLIHGLVVKYGLESVVASQTSLLTMYSKCNMVEDSIKV 260

Query: 369 FDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAI 428
           F+  +  S  +W + I G  QNG  E A+S+F+EM    ++PN  T+SSIL AC+ L  +
Sbjct: 261 FNSLAYASHVTWTSFIVGLVQNGREEVALSMFREMMRCSISPNHFTLSSILHACSSLAML 320

Query: 429 SLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGY 488
             G+ +H +      + N +V  ALI +Y KCGN+ +AR +FD ++    V+ NTMI  Y
Sbjct: 321 EAGEQIHAVTVKLGVDGNKFVDAALIHLYGKCGNVEKARSVFDSLTELDIVSINTMIYAY 380

Query: 489 GLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPL 548
             +G G EAL+LF  +   G+ P+ VTF+S+L AC++AGLV EG +IF  + ++H  +  
Sbjct: 381 AQNGFGHEALELFERLKKLGLEPNVVTFISILLACNNAGLVEEGCQIFSLIRNNHSIELT 440

Query: 549 AEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLF 608
            +HY CM+D+LGRA + E+A   I+     P    W  LL AC IH +  +A    +K+ 
Sbjct: 441 RDHYTCMIDLLGRAKRFEEATMLIEE-GKNPDVIQWRTLLNACKIHGEVEMAEKFMKKML 499

Query: 609 ELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGD 668
           +  P + G H+LL+NIY++   +     ++   +  +L K P  + +++    H F +GD
Sbjct: 500 DQAPRDGGTHILLTNIYASAGKWDNVIEMKSAGRDLRLKKTPAMSWVDIDREVHTFMAGD 559

Query: 669 QLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIA 728
             HP++  I  ML +L  K+   G+  +T   L D+EEE+K   +  HSEKLAIAF L  
Sbjct: 560 LSHPRAHEISEMLHELIEKVITLGYNPDTKFVLQDLEEEKKISALYYHSEKLAIAFALWK 619

Query: 729 T-EPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           T    T IRI KNLRVC              G  I+ RDA RFHHFKGG+CSC DYW
Sbjct: 620 TCGKNTAIRIFKNLRVC--------------GDYIIARDAKRFHHFKGGICSCKDYW 662



 Score =  195 bits (495), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 148/512 (28%), Positives = 243/512 (47%), Gaps = 18/512 (3%)

Query: 20  KTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCY----ARALFFSIPKPDLFLF 75
           K+ + L   H  I+  G     S  +   H+L D    C     AR LF  +P   +  +
Sbjct: 15  KSLTTLKSLHTHILKSG-----SLFSFFGHKLIDGYIKCSVITEARKLFDEMPNRHIVTW 69

Query: 76  NVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAI 135
           N +I    +    K +I  Y+++     L PD +T+S +  A S       G   HG A+
Sbjct: 70  NSMISSHVSRGKTKEAIELYSNMLFEGVL-PDAYTFSAIFKAFSEMGVSREGQKAHGLAV 128

Query: 136 VSGYG-SDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSI 194
           V G+  SD FV   +VD+Y KF  +K AR VFD++ +KD VL+ ++I G  ++    +++
Sbjct: 129 VLGFEVSDGFVATGIVDMYAKFGKMKDARFVFDRVLDKDVVLFTALIVGYNQHGLDGEAL 188

Query: 195 WVFGDMVRNGGTWL--DSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLV 252
            VF DMV   G+ +  +  ++A+VL +   + +L  G  I  L +K G    V   T L+
Sbjct: 189 EVFEDMV---GSRIKPNEYTLASVLVSCGNLGDLVNGKLIHGLVVKYGLESVVASQTSLL 245

Query: 253 SFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSS 312
           + YSKC  VE +  +F  +     ++  + I G   NG+ E +L +FR+++  +   N  
Sbjct: 246 TMYSKCNMVEDSIKVFNSLAYASHVTWTSFIVGLVQNGREEVALSMFREMMRCSISPNHF 305

Query: 313 TIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDES 372
           T+  ++        L     IH+  +K G+  N  V  AL  +Y +   +E AR +FD  
Sbjct: 306 TLSSILHACSSLAMLEAGEQIHAVTVKLGVDGNKFVDAALIHLYGKCGNVEKARSVFDSL 365

Query: 373 SEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGK 432
           +E  + S N MI  Y QNG   EA+ LF+ ++   + PN VT  SIL AC   G +  G 
Sbjct: 366 TELDIVSINTMIYAYAQNGFGHEALELFERLKKLGLEPNVVTFISILLACNNAGLVEEGC 425

Query: 433 WVHELVKSRN-FESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLH 491
            +  L+++ +  E      T +ID+  +     EA  L +   +   + W T+++   +H
Sbjct: 426 QIFSLIRNNHSIELTRDHYTCMIDLLGRAKRFEEATMLIEEGKNPDVIQWRTLLNACKIH 485

Query: 492 GHGLEALQLFSEMLHSGIRPSGV-TFLSVLYA 522
           G    A +   +ML    R  G    L+ +YA
Sbjct: 486 GEVEMAEKFMKKMLDQAPRDGGTHILLTNIYA 517



 Score =  112 bits (281), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 98/416 (23%), Positives = 185/416 (44%), Gaps = 24/416 (5%)

Query: 27  QTHAQIIIHGFQ-NDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNN 85
           + H   ++ GF+ +D    T +    + F     AR +F  +   D+ LF  +I G++ +
Sbjct: 122 KAHGLAVVLGFEVSDGFVATGIVDMYAKFGKMKDARFVFDRVLDKDVVLFTALIVGYNQH 181

Query: 86  EMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFV 145
            +   ++  +  +   + + P+ +T + VL +     D   G L+HG  +  G  S +  
Sbjct: 182 GLDGEALEVFEDMV-GSRIKPNEYTLASVLVSCGNLGDLVNGKLIHGLVVKYGLESVVAS 240

Query: 146 GAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGG 205
             +L+ +Y K + V+ + KVF+ +     V W S I GL++N   + ++ +F +M+R   
Sbjct: 241 QTSLLTMYSKCNMVEDSIKVFNSLAYASHVTWTSFIVGLVQNGREEVALSMFREMMRCSI 300

Query: 206 TWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAE 265
           +  +  +++++L A + +  L  G +I  + +KLG   + +V   L+  Y KCG VE+A 
Sbjct: 301 S-PNHFTLSSILHACSSLAMLEAGEQIHAVTVKLGVDGNKFVDAALIHLYGKCGNVEKAR 359

Query: 266 LLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFG 325
            +F  +   D++S N MI  Y  NG    +L LF +L       N  T + ++      G
Sbjct: 360 SVFDSLTELDIVSINTMIYAYAQNGFGHEALELFERLKKLGLEPNVVTFISILLACNNAG 419

Query: 326 HLHLTNCIHSFCLKSGIVSNSSV------LTALSTVYSRLNEMEAARKLFDESSEKSLAS 379
            +     I S      I +N S+       T +  +  R    E A  L +E     +  
Sbjct: 420 LVEEGCQIFSL-----IRNNHSIELTRDHYTCMIDLLGRAKRFEEATMLIEEGKNPDVIQ 474

Query: 380 WNAMIAGYTQNGLTEEAISLFQEM--QASKVAPNPVTVSSILSACAQLGAISLGKW 433
           W  ++     +G  E A    ++M  QA +     + +++I +        S GKW
Sbjct: 475 WRTLLNACKIHGEVEMAEKFMKKMLDQAPRDGGTHILLTNIYA--------SAGKW 522


>gi|326488203|dbj|BAJ89940.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 637

 Score =  418 bits (1075), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 216/571 (37%), Positives = 330/571 (57%), Gaps = 1/571 (0%)

Query: 215 AVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRP 274
           ++L +      LR G ++    L  G      + T LV  Y+ CG+V  A  LF  + + 
Sbjct: 67  SILQSCVASGSLRAGRQLHGRLLVSGLGPDTVLSTKLVDLYAACGQVGHARRLFDGMPKR 126

Query: 275 DLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIH 334
           ++   N +I  Y   G  E+++RL+R ++      ++ T   ++        L     +H
Sbjct: 127 NVFLWNVLIRAYAREGPREAAVRLYRGMVEHGVEPDNFTYPLVLKACAALLDLETGREVH 186

Query: 335 SFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTE 394
                +    +  V   +  +Y++   ++ AR +FD  + +    WN+MIA Y QNG   
Sbjct: 187 QRVSGTRWGQDVFVCAGVVDMYAKCGCVDDARAVFDGIAVRDAVVWNSMIAAYGQNGRPM 246

Query: 395 EAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALI 454
           EA++L ++M A+ + P   T+ S +SA A   A+  G+ +H     R F     + T+L+
Sbjct: 247 EALALCRDMAANGIGPTIATLVSAVSAAADAAALPRGRELHGFGWRRGFGLQDKLKTSLV 306

Query: 455 DMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEML-HSGIRPSG 513
           DMYAK G +  AR LF+ +  +  V+WN MI GYG+HGH  EAL LF++M   + + P  
Sbjct: 307 DMYAKSGWVQVARVLFEQLMKRELVSWNAMICGYGMHGHADEALALFNKMKGDAQVTPDN 366

Query: 514 VTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIK 573
           +TF+ VL AC+H G+V E  E F  M++ +  KP  +HY C++D+LG  G+ E+A + IK
Sbjct: 367 ITFVGVLSACNHGGMVEEAKEFFYLMVNAYSIKPTVQHYTCVIDVLGHTGRFEEAYDLIK 426

Query: 574 GLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQ 633
           G+++EP   +WGALL  C IHK+  L  +A +KL EL+PE+ G +V LSNIY+    + +
Sbjct: 427 GMSIEPDSGIWGALLNGCKIHKNVELGELALQKLIELEPEDAGNYVHLSNIYAQSGKWEK 486

Query: 634 AATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGF 693
           AA VR+++  R L K   C+ IE+ G  H F  GD  HP+S  IY  LE+L G M +AG+
Sbjct: 487 AARVRKLMTNRGLKKILACSWIELKGKTHGFLVGDASHPRSDEIYGELERLEGLMSDAGY 546

Query: 694 QTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKF 753
             + +   H+V+++EK  M++ HSE+LAIAFGLI+T PGT++ + KNLRVC DCH   K 
Sbjct: 547 VPDIIPVFHNVDDDEKRNMVRSHSERLAIAFGLISTPPGTKLLVTKNLRVCEDCHVVIKL 606

Query: 754 ISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           IS++  R I++RD NR+HHF  G CSC DYW
Sbjct: 607 ISQIVQREIIIRDVNRYHHFVNGECSCKDYW 637



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 132/482 (27%), Positives = 231/482 (47%), Gaps = 52/482 (10%)

Query: 5   TPQSRNLFLSLLKGAKTQSQLT---QTHAQIIIHGFQNDLSTVTKLAHRLSDFKATC--- 58
           +P + +   S+L+       L    Q H ++++ G   D    T L+ +L D  A C   
Sbjct: 58  SPHAYHHHTSILQSCVASGSLRAGRQLHGRLLVSGLGPD----TVLSTKLVDLYAACGQV 113

Query: 59  -YARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSA 117
            +AR LF  +PK ++FL+NV+IR ++     ++++  Y  + ++  + PDNFTY  VL A
Sbjct: 114 GHARRLFDGMPKRNVFLWNVLIRAYAREGPREAAVRLYRGMVEH-GVEPDNFTYPLVLKA 172

Query: 118 ASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLW 177
            +A  D   G  +H     + +G D+FV A +VD+Y K   V  AR VFD +  +D V+W
Sbjct: 173 CAALLDLETGREVHQRVSGTRWGQDVFVCAGVVDMYAKCGCVDDARAVFDGIAVRDAVVW 232

Query: 178 NSMISGLMKNCCFQDSIWVFGDMVRNG-GTWLDSTSVAAVLPAVAEVQELRLGMEIQCLG 236
           NSMI+   +N    +++ +  DM  NG G  +   ++ + + A A+   L  G E+   G
Sbjct: 233 NSMIAAYGQNGRPMEALALCRDMAANGIGPTI--ATLVSAVSAAADAAALPRGRELHGFG 290

Query: 237 LKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSL 296
            + GF     + T LV  Y+K G V+ A +LF  +++ +L+S NAMI GY  +G  + +L
Sbjct: 291 WRRGFGLQDKLKTSLVDMYAKSGWVQVARVLFEQLMKRELVSWNAMICGYGMHGHADEAL 350

Query: 297 RLFRQLLASAERV-NSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTV 355
            LF ++   A+   ++ T VG++                S C   G+V       A    
Sbjct: 351 ALFNKMKGDAQVTPDNITFVGVL----------------SACNHGGMVEE-----AKEFF 389

Query: 356 YSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTV 415
           Y  +N           S + ++  +  +I      G  EEA  L + M    + P+    
Sbjct: 390 YLMVNAY---------SIKPTVQHYTCVIDVLGHTGRFEEAYDLIKGMS---IEPDSGIW 437

Query: 416 SSILSACAQLGAISLGKW-VHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMS 474
            ++L+ C     + LG+  + +L++    ++  YV   L ++YA+ G   +A  +  LM+
Sbjct: 438 GALLNGCKIHKNVELGELALQKLIELEPEDAGNYVH--LSNIYAQSGKWEKAARVRKLMT 495

Query: 475 HK 476
           ++
Sbjct: 496 NR 497



 Score = 86.3 bits (212), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 51/177 (28%), Positives = 88/177 (49%), Gaps = 6/177 (3%)

Query: 416 SSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSH 475
           +SIL +C   G++  G+ +H  +       +  +ST L+D+YA CG +  AR LFD M  
Sbjct: 66  TSILQSCVASGSLRAGRQLHGRLLVSGLGPDTVLSTKLVDLYAACGQVGHARRLFDGMPK 125

Query: 476 KSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEI 535
           ++   WN +I  Y   G    A++L+  M+  G+ P   T+  VL AC+    +  G E+
Sbjct: 126 RNVFLWNVLIRAYAREGPREAAVRLYRGMVEHGVEPDNFTYPLVLKACAALLDLETGREV 185

Query: 536 FQSMIHDHGFKPLAEHYAC--MVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGA 590
            Q +    G +   + + C  +VD+  + G ++ A     G+AV     VW +++ A
Sbjct: 186 HQRV---SGTRWGQDVFVCAGVVDMYAKCGCVDDARAVFDGIAVRDA-VVWNSMIAA 238


>gi|449437256|ref|XP_004136408.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g48910-like [Cucumis sativus]
          Length = 632

 Score =  418 bits (1075), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 215/561 (38%), Positives = 323/561 (57%), Gaps = 35/561 (6%)

Query: 259 GEVERAELLFRDIVR-PDLISCNAMISGYTCNGKTESSLRLFRQ--LLASAERVNSSTIV 315
           G +  + L+F   +  P++ + NA++  ++ +    +++  F    +L +A   +  T  
Sbjct: 72  GNLRHSVLIFNHFLSFPNIFAYNALLKAFSQHNAWHTTISYFNNQLVLPNAPNPDEYTFT 131

Query: 316 GLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRL----------NEM--- 362
            ++        +     +H F  K G  SN  V  +L  +Y ++          +EM   
Sbjct: 132 SVLKACAGLAQVLEGQKVHCFVTKYGCESNLFVRNSLVDLYFKVGCNCIAQKLFDEMVVR 191

Query: 363 ------------------EAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQ 404
                             + AR +FD   EK+L SW+ MI+GY +N    +AI LF++MQ
Sbjct: 192 DVVSWNTLISGYCFSGMVDKARMVFDGMMEKNLVSWSTMISGYARNEKYADAIELFRQMQ 251

Query: 405 -ASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNI 463
               +APN VT+ S+LSACA LGA+ LGKW+H  ++    E  +++  AL DMYAKCG +
Sbjct: 252 HEGGLAPNDVTLVSVLSACAHLGALDLGKWIHRFIRRNKIEVGLFLGNALADMYAKCGCV 311

Query: 464 VEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYAC 523
           +EA+ +F  M  +  ++W+ +I G  ++G+  EA   F+EM+  G+ P+ ++F+ +L AC
Sbjct: 312 LEAKGVFHEMHERDVISWSIIIMGLAMYGYANEAFNFFAEMIEDGLEPNDISFMGLLTAC 371

Query: 524 SHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAV 583
           +HAGLV +G E F  M   +G  P  EHY C+VD+L RAG+L++A   I  + ++P   V
Sbjct: 372 THAGLVDKGLEYFDMMPQVYGITPKIEHYGCVVDLLSRAGRLDQAESLINSMPMQPNVIV 431

Query: 584 WGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKK 643
           WGALLG C I+KD         ++ ELD  + G  V L+N+Y++      AA+ R  ++ 
Sbjct: 432 WGALLGGCRIYKDAERGERVVWRILELDSNHSGSLVYLANVYASMGRLDDAASCRLRMRD 491

Query: 644 RKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHD 703
            K  K PGC+ IE+  + + F  GD  HPQS  IY+M+ +L  KM+ AG++ +T   +H+
Sbjct: 492 NKSMKTPGCSWIEINNSVYEFFMGDSSHPQSLRIYSMIRELKWKMKVAGYKPKTDLVIHN 551

Query: 704 VEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIV 763
           ++EEEKE  +  HSEKLA+AFGLI T  GT IRI+KNLRVC DCH A K ISK+  R IV
Sbjct: 552 IDEEEKEDALSTHSEKLALAFGLINTSEGTTIRIVKNLRVCNDCHDAIKIISKIVEREIV 611

Query: 764 VRDANRFHHFKGGVCSCGDYW 784
           VRD +RFHHFK G CSC DYW
Sbjct: 612 VRDRSRFHHFKDGKCSCNDYW 632



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 104/436 (23%), Positives = 182/436 (41%), Gaps = 83/436 (19%)

Query: 70  PDLFLFNVIIRGFSNNEMPKSSICFYTH-LRKNTALTPDNFTYSFVLSAASACCDRSIGV 128
           P++F +N +++ FS +    ++I ++ + L    A  PD +T++ VL A +      +  
Sbjct: 88  PNIFAYNALLKAFSQHNAWHTTISYFNNQLVLPNAPNPDEYTFTSVLKACAG-----LAQ 142

Query: 129 LLHG---HAIVSGYG--SDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWN----- 178
           +L G   H  V+ YG  S+LFV  +LVDLYFK      A+K+FD+M  +D V WN     
Sbjct: 143 VLEGQKVHCFVTKYGCESNLFVRNSLVDLYFKVGCNCIAQKLFDEMVVRDVVSWNTLISG 202

Query: 179 --------------------------SMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTS 212
                                     +MISG  +N  + D+I +F  M   GG   +  +
Sbjct: 203 YCFSGMVDKARMVFDGMMEKNLVSWSTMISGYARNEKYADAIELFRQMQHEGGLAPNDVT 262

Query: 213 VAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIV 272
           + +VL A A +  L LG  I     +      +++   L   Y+KCG V  A+ +F ++ 
Sbjct: 263 LVSVLSACAHLGALDLGKWIHRFIRRNKIEVGLFLGNALADMYAKCGCVLEAKGVFHEMH 322

Query: 273 RPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNC 332
             D+IS + +I G    G    +   F +++      N  + +GL           LT C
Sbjct: 323 ERDVISWSIIIMGLAMYGYANEAFNFFAEMIEDGLEPNDISFMGL-----------LTAC 371

Query: 333 IHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGL 392
            H+  +  G+         +  VY    ++E                +  ++   ++ G 
Sbjct: 372 THAGLVDKGL----EYFDMMPQVYGITPKIE---------------HYGCVVDLLSRAGR 412

Query: 393 TEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGK---W-VHELVKSRN----FE 444
            ++A SL   M    + PN +   ++L  C        G+   W + EL  + +    + 
Sbjct: 413 LDQAESLINSM---PMQPNVIVWGALLGGCRIYKDAERGERVVWRILELDSNHSGSLVYL 469

Query: 445 SNIYVSTALIDMYAKC 460
           +N+Y S   +D  A C
Sbjct: 470 ANVYASMGRLDDAASC 485



 Score =  102 bits (255), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 84/382 (21%), Positives = 164/382 (42%), Gaps = 36/382 (9%)

Query: 177 WNSMISGLMKNCCFQDSIWVFGD-MVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCL 235
           +N+++    ++  +  +I  F + +V       D  +  +VL A A + ++  G ++ C 
Sbjct: 93  YNALLKAFSQHNAWHTTISYFNNQLVLPNAPNPDEYTFTSVLKACAGLAQVLEGQKVHCF 152

Query: 236 GLKLGFHDHVYVLTGLVSFYSKCG-------------------------------EVERA 264
             K G   +++V   LV  Y K G                                V++A
Sbjct: 153 VTKYGCESNLFVRNSLVDLYFKVGCNCIAQKLFDEMVVRDVVSWNTLISGYCFSGMVDKA 212

Query: 265 ELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERV-NSSTIVGLIPVFYP 323
            ++F  ++  +L+S + MISGY  N K   ++ LFRQ+        N  T+V ++     
Sbjct: 213 RMVFDGMMEKNLVSWSTMISGYARNEKYADAIELFRQMQHEGGLAPNDVTLVSVLSACAH 272

Query: 324 FGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAM 383
            G L L   IH F  ++ I     +  AL+ +Y++   +  A+ +F E  E+ + SW+ +
Sbjct: 273 LGALDLGKWIHRFIRRNKIEVGLFLGNALADMYAKCGCVLEAKGVFHEMHERDVISWSII 332

Query: 384 IAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLG-KWVHELVKSRN 442
           I G    G   EA + F EM    + PN ++   +L+AC   G +  G ++   + +   
Sbjct: 333 IMGLAMYGYANEAFNFFAEMIEDGLEPNDISFMGLLTACTHAGLVDKGLEYFDMMPQVYG 392

Query: 443 FESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEV-TWNTMISGYGLHGHGLEALQLF 501
               I     ++D+ ++ G + +A  L + M  +  V  W  ++ G  ++       ++ 
Sbjct: 393 ITPKIEHYGCVVDLLSRAGRLDQAESLINSMPMQPNVIVWGALLGGCRIYKDAERGERVV 452

Query: 502 SEMLHSGIRPSG-VTFLSVLYA 522
             +L      SG + +L+ +YA
Sbjct: 453 WRILELDSNHSGSLVYLANVYA 474



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 66/270 (24%), Positives = 123/270 (45%), Gaps = 4/270 (1%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           AR +F  + + +L  ++ +I G++ NE    +I  +  ++    L P++ T   VLSA +
Sbjct: 212 ARMVFDGMMEKNLVSWSTMISGYARNEKYADAIELFRQMQHEGGLAPNDVTLVSVLSACA 271

Query: 120 ACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNS 179
                 +G  +H     +     LF+G AL D+Y K   V  A+ VF +M E+D + W+ 
Sbjct: 272 HLGALDLGKWIHRFIRRNKIEVGLFLGNALADMYAKCGCVLEAKGVFHEMHERDVISWSI 331

Query: 180 MISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGME-IQCLGLK 238
           +I GL       ++   F +M+ +G    D  S   +L A      +  G+E    +   
Sbjct: 332 IIMGLAMYGYANEAFNFFAEMIEDGLEPND-ISFMGLLTACTHAGLVDKGLEYFDMMPQV 390

Query: 239 LGFHDHVYVLTGLVSFYSKCGEVERAELLFRDI-VRPDLISCNAMISGYTCNGKTESSLR 297
            G    +     +V   S+ G +++AE L   + ++P++I   A++ G       E   R
Sbjct: 391 YGITPKIEHYGCVVDLLSRAGRLDQAESLINSMPMQPNVIVWGALLGGCRIYKDAERGER 450

Query: 298 LFRQLLASAERVNSSTIVGLIPVFYPFGHL 327
           +  ++L   +  +S ++V L  V+   G L
Sbjct: 451 VVWRIL-ELDSNHSGSLVYLANVYASMGRL 479


>gi|356495778|ref|XP_003516750.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13270,
           chloroplastic-like [Glycine max]
          Length = 765

 Score =  418 bits (1075), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 228/685 (33%), Positives = 374/685 (54%), Gaps = 11/685 (1%)

Query: 103 ALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSA 162
           ++ P ++ Y F +         S G L H   +     S+ F+   ++ +Y       SA
Sbjct: 89  SINPRSYEYLFKMCGTLGAL--SDGKLFHNR-LQRMANSNKFIDNCILKMYCDCKSFTSA 145

Query: 163 RKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAE 222
            + FDK+ ++D   W+++IS   +     +++ +F  M+  G T  +S+  + ++ +  +
Sbjct: 146 ERFFDKIVDQDLSSWSTIISAYTEEGRIDEAVRLFLRMLDLGIT-PNSSIFSTLIMSFTD 204

Query: 223 VQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAM 282
              L LG +I    +++GF  ++ + T + + Y KCG ++ AE+    + R + ++C  +
Sbjct: 205 PSMLDLGKQIHSQLIRIGFAANISIETLISNMYVKCGWLDGAEVATNKMTRKNAVACTGL 264

Query: 283 ISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGI 342
           + GYT   +   +L LF ++++    ++      ++      G L+    IHS+C+K G+
Sbjct: 265 MVGYTKAARNRDALLLFGKMISEGVELDGFVFSIILKACAALGDLYTGKQIHSYCIKLGL 324

Query: 343 VSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQE 402
            S  SV T L   Y +    EAAR+ F+   E +  SW+A+IAGY Q+G  + A+ +F+ 
Sbjct: 325 ESEVSVGTPLVDFYVKCARFEAARQAFESIHEPNDFSWSALIAGYCQSGQFDRALEVFKA 384

Query: 403 MQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGN 462
           +++  V  N    ++I  AC+ +  +  G  +H     +   + +   +A+I MY+KCG 
Sbjct: 385 IRSKGVLLNSFIYTNIFQACSAVSDLICGAQIHADAIKKGLVAYLSGESAMISMYSKCGQ 444

Query: 463 IVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYA 522
           +  A + F  +     V W  +I  +  HG   EAL+LF EM  SG+RP+ VTF+ +L A
Sbjct: 445 VDYAHQAFLTIDKPDTVAWTAIICAHAYHGKAFEALRLFKEMQGSGVRPNAVTFIGLLNA 504

Query: 523 CSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPA 582
           CSH+GLV+EG +I  SM  ++G  P  +HY CM+D+  RAG L++ALE I+ L  EP   
Sbjct: 505 CSHSGLVKEGKKILDSMSDEYGVNPTIDHYNCMIDVYSRAGLLQEALEVIRSLPFEPDVM 564

Query: 583 VWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVK 642
            W +LLG C  H++  +  +A++ +F LDP +   +V++ N+Y+    + +AA  R+++ 
Sbjct: 565 SWKSLLGGCWSHRNLEIGMIAADNIFRLDPLDSATYVIMFNLYALAGKWDEAAQFRKMMA 624

Query: 643 KRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLN---GKMREAGFQTETVT 699
           +R L K   C+ I V G  H F  GD+ HPQ+  IY+ L++LN    K +E     E   
Sbjct: 625 ERNLRKEVSCSWIIVKGKVHRFVVGDRHHPQTEQIYSKLKELNFSFKKSKERLLNEE--N 682

Query: 700 ALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTG 759
           AL D  E +++L+   HSE+LAIA+GLI T   T I + KN R C DCH   K +S VTG
Sbjct: 683 ALCDFTERKEQLL--DHSERLAIAYGLICTAADTPIMVFKNTRSCKDCHDFAKRVSIVTG 740

Query: 760 RVIVVRDANRFHHFKGGVCSCGDYW 784
           R +VVRD NRFHH   G CSC DYW
Sbjct: 741 RELVVRDGNRFHHINSGECSCRDYW 765


>gi|224117876|ref|XP_002317690.1| predicted protein [Populus trichocarpa]
 gi|222860755|gb|EEE98302.1| predicted protein [Populus trichocarpa]
          Length = 706

 Score =  418 bits (1075), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 235/668 (35%), Positives = 371/668 (55%), Gaps = 2/668 (0%)

Query: 32  IIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNEMPKSS 91
           I+  GF  D+   + L    +D      AR  F  +   D  L+NV+I G+       S+
Sbjct: 36  ILEMGFDLDMFVASSLIKLYADNGCIEDARRFFDKMIDKDCVLWNVMINGYVQCGESDSA 95

Query: 92  ICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVD 151
           I  +  +  + A  PD+ T++ VLS + +      G  LHG  + SG      VG  LV 
Sbjct: 96  IKLFKDMMSSEA-KPDSVTFACVLSISCSEAMVEYGRQLHGLVVRSGLDFVPLVGNTLVT 154

Query: 152 LYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDST 211
           +Y K   +  ARK+FD MP+ D V+WN MI G ++N    D+  +F +M+ + G   DS 
Sbjct: 155 VYSKGRQLGDARKLFDMMPQIDLVVWNRMIGGYVQNGFMDDASMLFNEMI-SAGIKPDSI 213

Query: 212 SVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDI 271
           +  + LP++AE   L+   EI    ++ G    VY+ + L+  Y KC +   A  +F   
Sbjct: 214 TFTSFLPSLAESSSLKQIKEIHGYIVRHGVILDVYLNSALIDLYFKCRDAVMACKMFNLS 273

Query: 272 VRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTN 331
            + D++   AMISGY  NG  + +L +FR LL      N+ T   ++P       + L  
Sbjct: 274 TKFDIVIYTAMISGYVLNGMNKDALEIFRWLLQKKMIPNALTFSSILPACAGLAAIKLGR 333

Query: 332 CIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNG 391
            +H + +K+ +     V +A+  +Y++   ++ A  +F   S K    WN++I  ++Q+G
Sbjct: 334 ELHGYIIKNELEEKCPVGSAIMNMYAKCGRLDLAHLIFGRISIKDAICWNSIITSFSQDG 393

Query: 392 LTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVST 451
             EEAI LF++M    V  + VTVS+ LSACA + A+  GK +H  +    FES+++  +
Sbjct: 394 KPEEAIYLFRQMGMEGVKYDCVTVSAALSACANIPALHYGKEIHGFMIKGAFESDLFDMS 453

Query: 452 ALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRP 511
           ALI+MYAKCG +  AR +F+LM  K+EV WN++I+ YG HG+  ++L LF  ML  GI+P
Sbjct: 454 ALINMYAKCGKLNIARLVFNLMQEKNEVAWNSIIAAYGYHGYLADSLALFHNMLEEGIQP 513

Query: 512 SGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEF 571
             +TFL++L +C HAG V +G   F+ M  ++G     EHYACM D+ GRAG L++A E 
Sbjct: 514 DHITFLTILSSCGHAGQVEDGVRYFRCMTEEYGIPAQMEHYACMADLFGRAGHLDEAFEV 573

Query: 572 IKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDY 631
           I  +   P  +VWG LLGAC +H +  LA VAS  L +L+P+N GY++LL+++ +    +
Sbjct: 574 ITSMPFPPAASVWGTLLGACRVHGNVELAEVASRYLLDLEPKNSGYYLLLTHVLADAGKW 633

Query: 632 LQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREA 691
                ++ ++K+R + K PGC+ IEV  T  VF + D  HP+S  IY++L+ L  ++R+ 
Sbjct: 634 RSVHKIQHLMKERGVQKVPGCSWIEVNNTTCVFFAADGSHPESPQIYSLLKSLLLELRKV 693

Query: 692 GFQTETVT 699
           G+  + V 
Sbjct: 694 GYVPQAVA 701



 Score =  225 bits (574), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 148/521 (28%), Positives = 265/521 (50%), Gaps = 7/521 (1%)

Query: 106 PDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKV 165
           PD +T+  V+   +   +  +G ++    +  G+  D+FV ++L+ LY     ++ AR+ 
Sbjct: 8   PDKYTFPPVIKCCTGLNNVRLGKVIQDMILEMGFDLDMFVASSLIKLYADNGCIEDARRF 67

Query: 166 FDKMPEKDTVLWNSMISGLMKNCCFQDS-IWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQ 224
           FDKM +KD VLWN MI+G ++ C   DS I +F DM+ +     DS + A VL       
Sbjct: 68  FDKMIDKDCVLWNVMINGYVQ-CGESDSAIKLFKDMMSSEAK-PDSVTFACVLSISCSEA 125

Query: 225 ELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMIS 284
            +  G ++  L ++ G      V   LV+ YSK  ++  A  LF  + + DL+  N MI 
Sbjct: 126 MVEYGRQLHGLVVRSGLDFVPLVGNTLVTVYSKGRQLGDARKLFDMMPQIDLVVWNRMIG 185

Query: 285 GYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVS 344
           GY  NG  + +  LF +++++  + +S T    +P       L     IH + ++ G++ 
Sbjct: 186 GYVQNGFMDDASMLFNEMISAGIKPDSITFTSFLPSLAESSSLKQIKEIHGYIVRHGVIL 245

Query: 345 NSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQ 404
           +  + +AL  +Y +  +   A K+F+ S++  +  + AMI+GY  NG+ ++A+ +F+ + 
Sbjct: 246 DVYLNSALIDLYFKCRDAVMACKMFNLSTKFDIVIYTAMISGYVLNGMNKDALEIFRWLL 305

Query: 405 ASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIV 464
             K+ PN +T SSIL ACA L AI LG+ +H  +     E    V +A+++MYAKCG + 
Sbjct: 306 QKKMIPNALTFSSILPACAGLAAIKLGRELHGYIIKNELEEKCPVGSAIMNMYAKCGRLD 365

Query: 465 EARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACS 524
            A  +F  +S K  + WN++I+ +   G   EA+ LF +M   G++   VT  + L AC+
Sbjct: 366 LAHLIFGRISIKDAICWNSIITSFSQDGKPEEAIYLFRQMGMEGVKYDCVTVSAALSACA 425

Query: 525 HAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVW 584
           +   +  G EI   MI    F+      + ++++  + G+L  A   +  L  E     W
Sbjct: 426 NIPALHYGKEIHGFMIKG-AFESDLFDMSALINMYAKCGKLNIA-RLVFNLMQEKNEVAW 483

Query: 585 GALLGACMIHKDTNLARVASEKLFE--LDPENVGYHVLLSN 623
            +++ A   H     +      + E  + P+++ +  +LS+
Sbjct: 484 NSIIAAYGYHGYLADSLALFHNMLEEGIQPDHITFLTILSS 524



 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 102/338 (30%), Positives = 185/338 (54%)

Query: 205 GTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERA 264
           G + D  +   V+     +  +RLG  IQ + L++GF   ++V + L+  Y+  G +E A
Sbjct: 5   GVFPDKYTFPPVIKCCTGLNNVRLGKVIQDMILEMGFDLDMFVASSLIKLYADNGCIEDA 64

Query: 265 ELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPF 324
              F  ++  D +  N MI+GY   G+++S+++LF+ +++S  + +S T   ++ +    
Sbjct: 65  RRFFDKMIDKDCVLWNVMINGYVQCGESDSAIKLFKDMMSSEAKPDSVTFACVLSISCSE 124

Query: 325 GHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMI 384
             +     +H   ++SG+     V   L TVYS+  ++  ARKLFD   +  L  WN MI
Sbjct: 125 AMVEYGRQLHGLVVRSGLDFVPLVGNTLVTVYSKGRQLGDARKLFDMMPQIDLVVWNRMI 184

Query: 385 AGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFE 444
            GY QNG  ++A  LF EM ++ + P+ +T +S L + A+  ++   K +H  +      
Sbjct: 185 GGYVQNGFMDDASMLFNEMISAGIKPDSITFTSFLPSLAESSSLKQIKEIHGYIVRHGVI 244

Query: 445 SNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEM 504
            ++Y+++ALID+Y KC + V A ++F+L +    V +  MISGY L+G   +AL++F  +
Sbjct: 245 LDVYLNSALIDLYFKCRDAVMACKMFNLSTKFDIVIYTAMISGYVLNGMNKDALEIFRWL 304

Query: 505 LHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHD 542
           L   + P+ +TF S+L AC+    ++ G E+   +I +
Sbjct: 305 LQKKMIPNALTFSSILPACAGLAAIKLGRELHGYIIKN 342


>gi|225459793|ref|XP_002284799.1| PREDICTED: pentatricopeptide repeat-containing protein At2g33680
           [Vitis vinifera]
 gi|302141693|emb|CBI18896.3| unnamed protein product [Vitis vinifera]
          Length = 703

 Score =  418 bits (1074), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 250/704 (35%), Positives = 386/704 (54%), Gaps = 17/704 (2%)

Query: 3   MKTPQSRNLFLSLLKGAKTQS--QLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCY- 59
           M  P +R+ F +LL+    +S  +    HAQII        S+   +A+ L +  A C  
Sbjct: 1   MTLPSNRSFFTALLQYTHNRSLQKGKALHAQII-----KSSSSCVYIANSLVNLYAKCQR 55

Query: 60  ---ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSS--ICFYTHLR-KNTALTPDNFTYSF 113
              A+ +F  I   D+  +N II G+S +    SS  +  +  +R +NTA  P+  T++ 
Sbjct: 56  LREAKFVFERIQNKDVVSWNCIINGYSQHGPSGSSHVMELFQRMRAENTA--PNAHTFAG 113

Query: 114 VLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKD 173
           V +AAS   D + G L H  AI      D+FVG++L+++Y K      ARKVFD MPE++
Sbjct: 114 VFTAASTLVDAAGGRLAHAVAIKMDSCRDVFVGSSLMNMYCKAGLTPEARKVFDTMPERN 173

Query: 174 TVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQ 233
           +V W +MISG        +++ +F  ++R      +     +VL A+   + +  G +I 
Sbjct: 174 SVSWATMISGYASQKLAAEALGLF-RLMRREEEGENEFVFTSVLSALTLPELVNNGKQIH 232

Query: 234 CLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTE 293
           C+ +K G    V V   LV+ Y+KCG ++ A   F      + I+ +AMI+GY  +G ++
Sbjct: 233 CIAVKNGLLSIVSVGNALVTMYAKCGSLDDALQTFETSSDKNSITWSAMITGYAQSGDSD 292

Query: 294 SSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALS 353
            +L+LF  +  S  R +  T VG+I      G       +H + LK G  S   V+TAL 
Sbjct: 293 KALKLFSSMHLSGIRPSEFTFVGVINACSDLGAAWEGKQVHDYLLKLGFESQIYVMTALV 352

Query: 354 TVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPV 413
            +Y++ + +  ARK FD   E  +  W +MI GY QNG  E+A+SL+  M+   + PN +
Sbjct: 353 DMYAKCSSIVDARKGFDYLQEPDIVLWTSMIGGYVQNGENEDALSLYGRMEMEGILPNEL 412

Query: 414 TVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLM 473
           T++S+L AC+ L A+  GK +H       F   + + +AL  MYAKCG + +   +F  M
Sbjct: 413 TMASVLKACSSLAALEQGKQIHARTVKYGFGLEVPIGSALSTMYAKCGCLKDGTLVFRRM 472

Query: 474 SHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGD 533
             +  ++WN MISG   +G G EAL+LF EM   G +P  VTF+++L ACSH GLV  G 
Sbjct: 473 PARDVISWNAMISGLSQNGCGKEALELFEEMQLEGTKPDYVTFVNILSACSHMGLVERGW 532

Query: 534 EIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMI 593
             F+ M  + G  P  EHYACMVDIL RAG+L++A+EF +   ++ G  +W  +LGAC  
Sbjct: 533 GYFRMMFDEFGMDPRVEHYACMVDILSRAGKLKEAIEFTESATIDHGMCLWRIILGACRN 592

Query: 594 HKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCT 653
           +++  L   A EKL EL  +    +VLLS+IYSA   +     VR+++K R ++K PGC+
Sbjct: 593 YRNYELGAYAGEKLMELGSQESSAYVLLSSIYSALGRWEDVERVRRMMKLRGVSKEPGCS 652

Query: 654 LIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTET 697
            IE+    HVF   DQ+HPQ   I+  L +L+ +M++ G++  T
Sbjct: 653 WIELKSGVHVFVVKDQMHPQIGDIHVELRQLSKQMKDEGYEPAT 696


>gi|413920851|gb|AFW60783.1| hypothetical protein ZEAMMB73_487264 [Zea mays]
          Length = 770

 Score =  418 bits (1074), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 228/668 (34%), Positives = 366/668 (54%), Gaps = 15/668 (2%)

Query: 130 LHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCC 189
           LHGH + +G  +D+FV  +LV+ Y +    + AR +FD+MPEK+ V W ++I+G   N  
Sbjct: 100 LHGHMVKTGTSADMFVATSLVNAYMRCGASQDARSLFDQMPEKNVVTWTALITGYTVNSQ 159

Query: 190 FQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLT 249
             +++ VF +M+   G +    ++ A+L A +      LG ++    +K        +  
Sbjct: 160 LLEALEVFVEMLE-AGRYPSHYTLGAMLNACSASNNADLGSQVHGYTIKYRALSITSIGN 218

Query: 250 GLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGK-TESSLRLFRQLLASAER 308
            L   Y+K G +E A   FR +   ++I+   MIS    +   TE  L LF  +L     
Sbjct: 219 SLCRMYAKSGSLESAMRAFRMVPDKNVITWTTMISACAEDENYTELGLTLFLDMLMDGVL 278

Query: 309 VNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKL 368
            N  T+  ++ +      L+L   + +FC K G  +N  V  +   +Y R  E + A + 
Sbjct: 279 PNEFTLTSVMSLCGTRLDLNLGKQVQAFCFKIGCQTNIPVKNSTMYLYLRKGETDEAMRF 338

Query: 369 FDESSEKSLASWNAMIAGYTQNGLTE-----------EAISLFQEMQASKVAPNPVTVSS 417
           F+E  + S+ +WNAMI+GY Q   T            +A+ +F+ ++ S + P+  T SS
Sbjct: 339 FEEMDDVSIITWNAMISGYAQIMETAKDDLHARSRGFQALKVFRNLKRSAMKPDLFTFSS 398

Query: 418 ILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKS 477
           ILS C+ + A+  G+ +H       F S++ V++AL++MY KCG I +A + F  MS ++
Sbjct: 399 ILSVCSSMMALEQGEQIHAQTIKTGFLSDVVVNSALVNMYNKCGCIEDATKAFVEMSIRT 458

Query: 478 EVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQ 537
            VTW +MISGY  HG   EA+QLF +M  +G+RP+ +TF+ VL ACS+AGL  + +  F 
Sbjct: 459 LVTWTSMISGYSQHGRPQEAIQLFEDMRFAGVRPNEITFVCVLSACSYAGLAEKAEHYFD 518

Query: 538 SMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDT 597
            M  ++  +P+ +HY CMVD+  R G+L+ A  FI+    EP  A+W +L+  C  H + 
Sbjct: 519 MMKEEYKIEPIVDHYGCMVDMFVRLGRLDDAFAFIRRTGFEPNEAIWSSLVAGCRSHGNM 578

Query: 598 NLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEV 657
            LA  A+++L EL P+ +  +VLL N+Y +   +   A VR+++K+  L      + I +
Sbjct: 579 ELAFYAADRLIELRPKGIETYVLLLNMYISNERWHDVARVRKLMKQEGLGVLMDRSWITI 638

Query: 658 GGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKV-- 715
               + F + D+ H  S  +Y +LE L  K +  G++      L D E+++K     V  
Sbjct: 639 KDKVYFFKANDKTHELSDELYQLLENLLEKAKTIGYEPYQSAELSDSEDDKKPPAGSVRH 698

Query: 716 HSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKG 775
           HSE+LA+A GL+ T PG  +R+ KN+ +C DCH++ KF S +  R IVVRD+ R H FK 
Sbjct: 699 HSERLAVALGLLQTPPGATVRVTKNITMCRDCHSSIKFFSLLANREIVVRDSKRLHKFKD 758

Query: 776 GVCSCGDY 783
           G CSCGD+
Sbjct: 759 GRCSCGDF 766



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 125/500 (25%), Positives = 244/500 (48%), Gaps = 18/500 (3%)

Query: 29  HAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNEMP 88
           H  ++  G   D+   T L +      A+  AR+LF  +P+ ++  +  +I G++ N   
Sbjct: 101 HGHMVKTGTSADMFVATSLVNAYMRCGASQDARSLFDQMPEKNVVTWTALITGYTVNSQL 160

Query: 89  KSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAA 148
             ++  +  + +     P ++T   +L+A SA  +  +G  +HG+ I     S   +G +
Sbjct: 161 LEALEVFVEMLE-AGRYPSHYTLGAMLNACSASNNADLGSQVHGYTIKYRALSITSIGNS 219

Query: 149 LVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQD-SIWVFGDMVRNGGTW 207
           L  +Y K   ++SA + F  +P+K+ + W +MIS   ++  + +  + +F DM+ + G  
Sbjct: 220 LCRMYAKSGSLESAMRAFRMVPDKNVITWTTMISACAEDENYTELGLTLFLDMLMD-GVL 278

Query: 208 LDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELL 267
            +  ++ +V+       +L LG ++Q    K+G   ++ V    +  Y + GE + A   
Sbjct: 279 PNEFTLTSVMSLCGTRLDLNLGKQVQAFCFKIGCQTNIPVKNSTMYLYLRKGETDEAMRF 338

Query: 268 FRDIVRPDLISCNAMISGYT-----------CNGKTESSLRLFRQLLASAERVNSSTIVG 316
           F ++    +I+ NAMISGY               +   +L++FR L  SA + +  T   
Sbjct: 339 FEEMDDVSIITWNAMISGYAQIMETAKDDLHARSRGFQALKVFRNLKRSAMKPDLFTFSS 398

Query: 317 LIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKS 376
           ++ V      L     IH+  +K+G +S+  V +AL  +Y++   +E A K F E S ++
Sbjct: 399 ILSVCSSMMALEQGEQIHAQTIKTGFLSDVVVNSALVNMYNKCGCIEDATKAFVEMSIRT 458

Query: 377 LASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHE 436
           L +W +MI+GY+Q+G  +EAI LF++M+ + V PN +T   +LSAC+  G     +   +
Sbjct: 459 LVTWTSMISGYSQHGRPQEAIQLFEDMRFAGVRPNEITFVCVLSACSYAGLAEKAEHYFD 518

Query: 437 LVKSR-NFESNIYVSTALIDMYAKCGNIVEARELFDLMS-HKSEVTWNTMISGYGLHGHG 494
           ++K     E  +     ++DM+ + G + +A           +E  W+++++G   HG+ 
Sbjct: 519 MMKEEYKIEPIVDHYGCMVDMFVRLGRLDDAFAFIRRTGFEPNEAIWSSLVAGCRSHGNM 578

Query: 495 LEALQLFSEMLHSGIRPSGV 514
             A      ++   +RP G+
Sbjct: 579 ELAFYAADRLIE--LRPKGI 596



 Score =  112 bits (280), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 72/223 (32%), Positives = 110/223 (49%), Gaps = 1/223 (0%)

Query: 302 LLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNE 361
           +L   + V S+  V L+ V    G L     +H   +K+G  ++  V T+L   Y R   
Sbjct: 69  MLREGKTVQSAMYVPLLHVCVETGSLGGARALHGHMVKTGTSADMFVATSLVNAYMRCGA 128

Query: 362 MEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSA 421
            + AR LFD+  EK++ +W A+I GYT N    EA+ +F EM  +   P+  T+ ++L+A
Sbjct: 129 SQDARSLFDQMPEKNVVTWTALITGYTVNSQLLEALEVFVEMLEAGRYPSHYTLGAMLNA 188

Query: 422 CAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTW 481
           C+      LG  VH         S   +  +L  MYAK G++  A   F ++  K+ +TW
Sbjct: 189 CSASNNADLGSQVHGYTIKYRALSITSIGNSLCRMYAKSGSLESAMRAFRMVPDKNVITW 248

Query: 482 NTMISGYGLHGHGLE-ALQLFSEMLHSGIRPSGVTFLSVLYAC 523
            TMIS      +  E  L LF +ML  G+ P+  T  SV+  C
Sbjct: 249 TTMISACAEDENYTELGLTLFLDMLMDGVLPNEFTLTSVMSLC 291



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 65/223 (29%), Positives = 108/223 (48%), Gaps = 16/223 (7%)

Query: 379 SWNAMIAGYTQNGLTEEA-ISLFQEMQASKVAPNPVTVSS-----ILSACAQLGAISLGK 432
           +WN       QNG T EA +      +A  +     TV S     +L  C + G++   +
Sbjct: 39  NWNGRSIQAAQNGSTMEAPLRPLDVGEAMAMLREGKTVQSAMYVPLLHVCVETGSLGGAR 98

Query: 433 WVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHG 492
            +H  +      ++++V+T+L++ Y +CG   +AR LFD M  K+ VTW  +I+GY ++ 
Sbjct: 99  ALHGHMVKTGTSADMFVATSLVNAYMRCGASQDARSLFDQMPEKNVVTWTALITGYTVNS 158

Query: 493 HGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHY 552
             LEAL++F EML +G  PS  T  ++L ACS +     G     S +H +  K  A   
Sbjct: 159 QLLEALEVFVEMLEAGRYPSHYTLGAMLNACSASNNADLG-----SQVHGYTIKYRALSI 213

Query: 553 ACMVDILGR----AGQLEKALEFIKGLAVEPGPAVWGALLGAC 591
             + + L R    +G LE A+   + +  +     W  ++ AC
Sbjct: 214 TSIGNSLCRMYAKSGSLESAMRAFR-MVPDKNVITWTTMISAC 255


>gi|449453744|ref|XP_004144616.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
 gi|449511814|ref|XP_004164061.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 681

 Score =  418 bits (1074), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 233/658 (35%), Positives = 374/658 (56%), Gaps = 13/658 (1%)

Query: 130 LHGHAIVSGYGSDLFVGAALVDLYF--KFSWVKSARKVFDKMPEKDTVLWNSMISGLMKN 187
           LH  +I +   +   V + L+ LY   + + ++ A  +FD + E   V WN +I   ++N
Sbjct: 34  LHALSIKTASLNHPSVSSRLLALYADPRINNLQYAHSLFDWIQEPTLVSWNLLIKCYIEN 93

Query: 188 CCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYV 247
               D+I +F  ++ +     DS ++  VL   A +  L+ G +I  L LK+GF    +V
Sbjct: 94  QRSNDAIALFCKLLCDFVP--DSFTLPCVLKGCARLGALQEGKQIHGLVLKIGFGVDKFV 151

Query: 248 LTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAE 307
           L+ LVS YSKCGE+E    +F  +   D++S N++I GY   G+ E +L +F ++     
Sbjct: 152 LSSLVSMYSKCGEIELCRKVFDRMEDKDVVSWNSLIDGYARCGEIELALEMFEEM----P 207

Query: 308 RVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARK 367
             +S +   LI      G L     +         + NS    A+   Y +  +   A++
Sbjct: 208 EKDSFSWTILIDGLSKSGKLEAARDV----FDRMPIRNSVSWNAMINGYMKAGDSNTAKE 263

Query: 368 LFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGA 427
           LFD+  E+SL +WN+MI GY +N    +A+ LF+ M    ++PN  T+   +SA + + +
Sbjct: 264 LFDQMPERSLVTWNSMITGYERNKQFTKALKLFEVMLREDISPNYTTILGAVSAASGMVS 323

Query: 428 ISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISG 487
           +  G+WVH  +    F+++  + T LI+MY+KCG++  A  +F  +  K    W ++I G
Sbjct: 324 LGTGRWVHSYIVKSGFKTDGVLGTLLIEMYSKCGSVKSALRVFRSIPKKKLGHWTSVIVG 383

Query: 488 YGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKP 547
            G+HG   + L+LF EM  +G++P  +TF+ VL ACSHAG   +    F+ M +D+G KP
Sbjct: 384 LGMHGLVEQTLELFDEMCRTGLKPHAITFIGVLNACSHAGFAEDAHRYFKMMTYDYGIKP 443

Query: 548 LAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKL 607
             EHY C++D+L RAG LE+A + I+ + ++    +W +LL     H +  +   A++ L
Sbjct: 444 SIEHYGCLIDVLCRAGHLEEAKDTIERMPIKANKVIWTSLLSGSRKHGNIRMGEYAAQHL 503

Query: 608 FELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSG 667
            +L P+  G +V+LSN+Y+A   + +   VR+++KK+ + K PGC+ IE  G+ H F  G
Sbjct: 504 IDLAPDTTGCYVILSNMYAAAGLWEKVRQVREMMKKKGMKKDPGCSSIEHQGSIHEFIVG 563

Query: 668 DQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEE-EKELMMKVHSEKLAIAFGL 726
           D+ HPQ+  IY  L ++  K+  AG   +T   L  +EE+ EKE  ++ HSE+LAIAFGL
Sbjct: 564 DKSHPQTEEIYIKLCEMKKKLNVAGHIPDTTQVLLCLEEDNEKEAELETHSERLAIAFGL 623

Query: 727 IATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           +  + G+ IRIIKNLR+C DCH  TK +S +  R I++RD +RFHHFK G CSC D+W
Sbjct: 624 LNIKHGSPIRIIKNLRICNDCHAVTKLLSHIYNREIIIRDGSRFHHFKSGSCSCKDFW 681



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 132/489 (26%), Positives = 238/489 (48%), Gaps = 29/489 (5%)

Query: 16  LKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATC--YARALFFSIPKPDLF 73
           L+   T+ +  Q HA  I     N  S  ++L    +D +     YA +LF  I +P L 
Sbjct: 22  LQNCGTEREANQLHALSIKTASLNHPSVSSRLLALYADPRINNLQYAHSLFDWIQEPTLV 81

Query: 74  LFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGH 133
            +N++I+ +  N+    +I  +  L  +    PD+FT   VL   +       G  +HG 
Sbjct: 82  SWNLLIKCYIENQRSNDAIALFCKLLCD--FVPDSFTLPCVLKGCARLGALQEGKQIHGL 139

Query: 134 AIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDS 193
            +  G+G D FV ++LV +Y K   ++  RKVFD+M +KD V WNS+I G  +    + +
Sbjct: 140 VLKIGFGVDKFVLSSLVSMYSKCGEIELCRKVFDRMEDKDVVSWNSLIDGYARCGEIELA 199

Query: 194 IWVFGDMV-RNGGTW---LDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLT 249
           + +F +M  ++  +W   +D  S +  L A  +V +            ++   + V    
Sbjct: 200 LEMFEEMPEKDSFSWTILIDGLSKSGKLEAARDVFD------------RMPIRNSV-SWN 246

Query: 250 GLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERV 309
            +++ Y K G+   A+ LF  +    L++ N+MI+GY  N +   +L+LF  +L      
Sbjct: 247 AMINGYMKAGDSNTAKELFDQMPERSLVTWNSMITGYERNKQFTKALKLFEVMLREDISP 306

Query: 310 NSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLF 369
           N +TI+G +        L     +HS+ +KSG  ++  + T L  +YS+   +++A ++F
Sbjct: 307 NYTTILGAVSAASGMVSLGTGRWVHSYIVKSGFKTDGVLGTLLIEMYSKCGSVKSALRVF 366

Query: 370 DESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAIS 429
               +K L  W ++I G   +GL E+ + LF EM  + + P+ +T   +L+AC+  G   
Sbjct: 367 RSIPKKKLGHWTSVIVGLGMHGLVEQTLELFDEMCRTGLKPHAITFIGVLNACSHAG--- 423

Query: 430 LGKWVHELVKSRNFESNIYVST----ALIDMYAKCGNIVEARELFDLMSHKS-EVTWNTM 484
             +  H   K   ++  I  S      LID+  + G++ EA++  + M  K+ +V W ++
Sbjct: 424 FAEDAHRYFKMMTYDYGIKPSIEHYGCLIDVLCRAGHLEEAKDTIERMPIKANKVIWTSL 483

Query: 485 ISGYGLHGH 493
           +SG   HG+
Sbjct: 484 LSGSRKHGN 492


>gi|212721478|ref|NP_001131178.1| uncharacterized protein LOC100192486 [Zea mays]
 gi|194690792|gb|ACF79480.1| unknown [Zea mays]
          Length = 617

 Score =  418 bits (1074), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 203/436 (46%), Positives = 282/436 (64%), Gaps = 1/436 (0%)

Query: 349 LTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKV 408
           +TA+    +   +++AAR LFD   ++   +W+AMIAGY   G + EA+ LF EM ++  
Sbjct: 183 VTAMVAALAAGGDVDAARDLFDGMPQRDHVAWSAMIAGYMHVGRSREALMLFDEMLSAGT 242

Query: 409 APNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARE 468
                T+ S+L+ACAQ+G +  GKWVH  V+SR  + +I + TAL+DMY+KCG +V A E
Sbjct: 243 TVGEATLVSVLTACAQIGTLDRGKWVHWYVRSRGMQMSIKLGTALVDMYSKCGAVVTAME 302

Query: 469 LFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGL 528
           +F+ M+ ++  TW + +SG  ++G G E LQLF  M  +GI+P+GV+F++VL  CS AGL
Sbjct: 303 VFESMAERNVYTWTSAVSGLAMNGMGTECLQLFKRMEGAGIQPNGVSFVAVLRGCSMAGL 362

Query: 529 VREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALL 588
           V EG   F SM   +G  P  EHY CMVD+ GRAG+L+ A+ FI  + +EP   VWGALL
Sbjct: 363 VDEGRACFDSM-DKYGVDPWPEHYGCMVDLYGRAGRLDDAISFINDMPMEPHEGVWGALL 421

Query: 589 GACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAK 648
            A  IH   +L + A +KL  ++ EN   HV LSNIY+  +++   + VR ++K + + K
Sbjct: 422 NASRIHNSVDLGKYALDKLLAIESENDAAHVQLSNIYAESQNWKGVSRVRGMMKAKGVKK 481

Query: 649 APGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEE 708
            PG + IEV G  H F  G +LHP+   I  ML +++ ++R  G+   T   L D+EEEE
Sbjct: 482 VPGWSTIEVDGKVHEFYVGGRLHPRYNEIELMLAEMDRRLRLQGYTANTREVLFDIEEEE 541

Query: 709 KELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDAN 768
           KE  + +HSEKLA+AFGLI      EIRI+KNLRVC+DCH   K +SKV  R IV+RD N
Sbjct: 542 KEGAISLHSEKLALAFGLIVLPEDVEIRIVKNLRVCMDCHRYIKLVSKVFNREIVMRDRN 601

Query: 769 RFHHFKGGVCSCGDYW 784
           RFHHFKGG CSC DYW
Sbjct: 602 RFHHFKGGECSCRDYW 617



 Score =  106 bits (264), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 57/248 (22%), Positives = 125/248 (50%), Gaps = 1/248 (0%)

Query: 245 VYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLA 304
           V  +T +V+  +  G+V+ A  LF  + + D ++ +AMI+GY   G++  +L LF ++L+
Sbjct: 180 VVCVTAMVAALAAGGDVDAARDLFDGMPQRDHVAWSAMIAGYMHVGRSREALMLFDEMLS 239

Query: 305 SAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEA 364
           +   V  +T+V ++      G L     +H +    G+  +  + TAL  +YS+   +  
Sbjct: 240 AGTTVGEATLVSVLTACAQIGTLDRGKWVHWYVRSRGMQMSIKLGTALVDMYSKCGAVVT 299

Query: 365 ARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQ 424
           A ++F+  +E+++ +W + ++G   NG+  E + LF+ M+ + + PN V+  ++L  C+ 
Sbjct: 300 AMEVFESMAERNVYTWTSAVSGLAMNGMGTECLQLFKRMEGAGIQPNGVSFVAVLRGCSM 359

Query: 425 LGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELF-DLMSHKSEVTWNT 483
            G +  G+   + +     +        ++D+Y + G + +A     D+     E  W  
Sbjct: 360 AGLVDEGRACFDSMDKYGVDPWPEHYGCMVDLYGRAGRLDDAISFINDMPMEPHEGVWGA 419

Query: 484 MISGYGLH 491
           +++   +H
Sbjct: 420 LLNASRIH 427



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 108/526 (20%), Positives = 204/526 (38%), Gaps = 103/526 (19%)

Query: 14  SLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLF 73
           +LL      S L   HA +++ G     S +      L+      YAR +    P   L 
Sbjct: 11  TLLPSLAEASHLRALHAHLVVSGRLASPSHLAAFLASLASSNHLSYARLVLPQRPA-TLL 69

Query: 74  LFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLS--------------AAS 119
             N  IR  +    P    C      ++  L PD+++ +F++                ++
Sbjct: 70  AHNAFIRALARGPRP----CLAFAAFRDLPLPPDHYSLNFLVRAATALVASAAEEKHVSA 125

Query: 120 ACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKS------------------ 161
               R   V  HG A+  G+ +D  V + ++ +Y     V S                  
Sbjct: 126 EVNARLQAVSAHGAAVRWGHAADPHVQSGVLSMYAALGDVASSRAAFAEIACPDVVCVTA 185

Query: 162 -------------ARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWL 208
                        AR +FD MP++D V W++MI+G M     ++++ +F +M+ + GT +
Sbjct: 186 MVAALAAGGDVDAARDLFDGMPQRDHVAWSAMIAGYMHVGRSREALMLFDEML-SAGTTV 244

Query: 209 DSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLF 268
              ++ +VL A A++  L  G  +       G    + + T LV  YSKCG V  A  +F
Sbjct: 245 GEATLVSVLTACAQIGTLDRGKWVHWYVRSRGMQMSIKLGTALVDMYSKCGAVVTAMEVF 304

Query: 269 RDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLH 328
             +   ++ +  + +SG   NG     L+LF+++  +  + N  + V ++          
Sbjct: 305 ESMAERNVYTWTSAVSGLAMNGMGTECLQLFKRMEGAGIQPNGVSFVAVL---------- 354

Query: 329 LTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASW----NAMI 384
                   C  +G+V                   +  R  FD   +  +  W      M+
Sbjct: 355 ------RGCSMAGLV-------------------DEGRACFDSMDKYGVDPWPEHYGCMV 389

Query: 385 AGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHE---LVKSR 441
             Y + G  ++AIS   +M    + P+     ++L+A     ++ LGK+  +    ++S 
Sbjct: 390 DLYGRAGRLDDAISFINDM---PMEPHEGVWGALLNASRIHNSVDLGKYALDKLLAIESE 446

Query: 442 NFESNIYVSTALIDMYAKCGN---IVEARELFDLMSHKSEVTWNTM 484
           N  +++ +S    ++YA+  N   +   R +      K    W+T+
Sbjct: 447 NDAAHVQLS----NIYAESQNWKGVSRVRGMMKAKGVKKVPGWSTI 488


>gi|413938666|gb|AFW73217.1| hypothetical protein ZEAMMB73_724608 [Zea mays]
          Length = 610

 Score =  418 bits (1074), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 211/544 (38%), Positives = 318/544 (58%), Gaps = 8/544 (1%)

Query: 242 HDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQ 301
           H        L+S +  CG+++ A  +F  +   D+ S N M+SG + NG +E +  +FR 
Sbjct: 74  HPDTVSYNTLLSCHFACGDIDGARRVFSTMPVKDVTSWNTMVSGLSKNGASEEAAAMFR- 132

Query: 302 LLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNE 361
           ++     V+ + +V  +      G              +   +++ + TA+ + Y     
Sbjct: 133 IMPVRNAVSWNAMVAALACSGDMG------AAEDLFRNAPEKTDAILWTAMVSGYMDTGN 186

Query: 362 MEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEM-QASKVAPNPVTVSSILS 420
           ++ A + F     ++L SWNA++AGY +N   ++A+ +F+ M + S V PN  T+SS+L 
Sbjct: 187 VQKAMEFFGAMPVRNLVSWNAVVAGYVKNSRADDALRVFKTMVEDSIVQPNASTLSSVLL 246

Query: 421 ACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVT 480
            C+ L A+  G+ VH+         N+ V T+L+ MY KCG++ +A ++FD MS K  V 
Sbjct: 247 GCSNLSALGFGRQVHQWCMKLPLSRNVTVGTSLLSMYCKCGDLNDACKVFDEMSTKDIVA 306

Query: 481 WNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMI 540
           WN MISGY  HG G++A++LF +M   G+ P  +T L+VL AC H GL   G + F++M 
Sbjct: 307 WNAMISGYAQHGGGMQAIKLFEKMKDEGVVPDWITLLAVLTACIHTGLCDFGIQCFETMQ 366

Query: 541 HDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLA 600
             +  +P  +HY+CMVD+L RAG LE+A+  I  +  EP P+ +G LL AC ++K+   A
Sbjct: 367 EAYKIEPQIDHYSCMVDLLCRAGLLERAVNMIHSMPFEPHPSAYGTLLTACRVYKNLEFA 426

Query: 601 RVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGT 660
             A+ KL E DP+N G +V L+NIY+    +   + VR+ +K   + K PG + +E+ G 
Sbjct: 427 EFAARKLIEQDPQNAGAYVQLANIYAVANKWADVSRVRRWMKDNAVVKTPGYSWMEIKGV 486

Query: 661 PHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKL 720
            H F S D+LHPQ   I+  L++L   M+  G+  +   ALHDVE+  K  M+  HSEKL
Sbjct: 487 RHEFRSNDRLHPQLGLIHDKLDRLQMLMKAMGYVPDLDFALHDVEDSLKSQMLMRHSEKL 546

Query: 721 AIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSC 780
           AIAFGLI+T PG  +RI KNLR+C DCH A K ISK+  R I++RD  RFHHF+GG CSC
Sbjct: 547 AIAFGLISTSPGMTLRIFKNLRICGDCHNAAKLISKIEDREIILRDTTRFHHFRGGHCSC 606

Query: 781 GDYW 784
           GDYW
Sbjct: 607 GDYW 610



 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 93/317 (29%), Positives = 164/317 (51%), Gaps = 14/317 (4%)

Query: 149 LVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDM-VRNGGTW 207
           L+  +F    +  AR+VF  MP KD   WN+M+SGL KN   +++  +F  M VRN  +W
Sbjct: 83  LLSCHFACGDIDGARRVFSTMPVKDVTSWNTMVSGLSKNGASEEAAAMFRIMPVRNAVSW 142

Query: 208 LDSTSVAAVLPAVAEVQEL-RLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAEL 266
               +  A    +   ++L R   E               + T +VS Y   G V++A  
Sbjct: 143 NAMVAALACSGDMGAAEDLFRNAPE----------KTDAILWTAMVSGYMDTGNVQKAME 192

Query: 267 LFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLA-SAERVNSSTIVGLIPVFYPFG 325
            F  +   +L+S NA+++GY  N + + +LR+F+ ++  S  + N+ST+  ++       
Sbjct: 193 FFGAMPVRNLVSWNAVVAGYVKNSRADDALRVFKTMVEDSIVQPNASTLSSVLLGCSNLS 252

Query: 326 HLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIA 385
            L     +H +C+K  +  N +V T+L ++Y +  ++  A K+FDE S K + +WNAMI+
Sbjct: 253 ALGFGRQVHQWCMKLPLSRNVTVGTSLLSMYCKCGDLNDACKVFDEMSTKDIVAWNAMIS 312

Query: 386 GYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVK-SRNFE 444
           GY Q+G   +AI LF++M+   V P+ +T+ ++L+AC   G    G    E ++ +   E
Sbjct: 313 GYAQHGGGMQAIKLFEKMKDEGVVPDWITLLAVLTACIHTGLCDFGIQCFETMQEAYKIE 372

Query: 445 SNIYVSTALIDMYAKCG 461
             I   + ++D+  + G
Sbjct: 373 PQIDHYSCMVDLLCRAG 389



 Score =  106 bits (264), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 86/363 (23%), Positives = 168/363 (46%), Gaps = 41/363 (11%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           AR +F ++P  D+  +N ++ G S N   + +   +  +    A++     ++ +++A +
Sbjct: 96  ARRVFSTMPVKDVTSWNTMVSGLSKNGASEEAAAMFRIMPVRNAVS-----WNAMVAALA 150

Query: 120 ACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNS 179
              D      L  +A      +D  +  A+V  Y     V+ A + F  MP ++ V WN+
Sbjct: 151 CSGDMGAAEDLFRNAPEK---TDAILWTAMVSGYMDTGNVQKAMEFFGAMPVRNLVSWNA 207

Query: 180 MISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKL 239
           +++G +KN    D++ VF  MV +     +++++++VL   + +  L  G ++    +KL
Sbjct: 208 VVAGYVKNSRADDALRVFKTMVEDSIVQPNASTLSSVLLGCSNLSALGFGRQVHQWCMKL 267

Query: 240 GFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLF 299
               +V V T L+S Y KCG++  A  +F ++   D+++ NAMISGY  +G    +++LF
Sbjct: 268 PLSRNVTVGTSLLSMYCKCGDLNDACKVFDEMSTKDIVAWNAMISGYAQHGGGMQAIKLF 327

Query: 300 RQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRL 359
            ++             G++P +     + LT CIH+     GI                 
Sbjct: 328 EKMKDE----------GVVPDWITLLAV-LTACIHTGLCDFGIQC--------------F 362

Query: 360 NEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSIL 419
             M+ A K+     E  +  ++ M+    + GL E A+++   M      P+P    ++L
Sbjct: 363 ETMQEAYKI-----EPQIDHYSCMVDLLCRAGLLERAVNMIHSM---PFEPHPSAYGTLL 414

Query: 420 SAC 422
           +AC
Sbjct: 415 TAC 417



 Score = 76.3 bits (186), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 54/213 (25%), Positives = 101/213 (47%), Gaps = 39/213 (18%)

Query: 357 SRLNEMEAARKLFDESSE-------------------------------KSLASWNAMIA 385
           S L  +  AR+LFD                                   K + SWN M++
Sbjct: 57  SGLIRLADARRLFDSIPHPDTVSYNTLLSCHFACGDIDGARRVFSTMPVKDVTSWNTMVS 116

Query: 386 GYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFES 445
           G ++NG +EEA ++F+ M       N V+ +++++A A  G +   +   +L ++   ++
Sbjct: 117 GLSKNGASEEAAAMFRIMPVR----NAVSWNAMVAALACSGDMGAAE---DLFRNAPEKT 169

Query: 446 NIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEML 505
           +  + TA++  Y   GN+ +A E F  M  ++ V+WN +++GY  +    +AL++F  M+
Sbjct: 170 DAILWTAMVSGYMDTGNVQKAMEFFGAMPVRNLVSWNAVVAGYVKNSRADDALRVFKTMV 229

Query: 506 HSGI-RPSGVTFLSVLYACSHAGLVREGDEIFQ 537
              I +P+  T  SVL  CS+   +  G ++ Q
Sbjct: 230 EDSIVQPNASTLSSVLLGCSNLSALGFGRQVHQ 262


>gi|297817744|ref|XP_002876755.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297322593|gb|EFH53014.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 597

 Score =  417 bits (1073), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 224/548 (40%), Positives = 319/548 (58%), Gaps = 2/548 (0%)

Query: 231 EIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNG 290
           +I  + ++ GF +   +LT L+      G++  A  +F ++ +P +   N +  GY  N 
Sbjct: 29  KIHAVVIRTGFSEKNSLLTQLLENLVLVGDMCYARQVFDEMPKPRIFLWNTLFKGYVRNQ 88

Query: 291 KTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLT 350
               S+ L++++     R +  T   ++      G L     +H+  LK+G      V T
Sbjct: 89  LPFESVLLYKKMRDLGVRPDEFTYPFVVKAISQLGVLPCGVSLHAHVLKNGFECLGIVAT 148

Query: 351 ALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAP 410
            L  +Y +  E+ +A  LF+    K L +WNA IA   Q G +  A+  F +M A  V  
Sbjct: 149 ELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFIAVCVQTGNSAIALEYFNKMCADAVQF 208

Query: 411 NPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELF 470
           +  TV S+LSAC QLG++ +G+ +++  +    E NI V  A +DM+ KCG+   AR LF
Sbjct: 209 DSFTVVSMLSACGQLGSLDIGEEIYDRARKEEIECNIIVENARLDMHLKCGSTEAARVLF 268

Query: 471 DLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVR 530
           D M  ++ V+W+TMI GY ++G   EAL LF+ M + G+RP+ VTFL VL ACSHAGLV 
Sbjct: 269 DDMKQRNVVSWSTMIVGYAMNGDSGEALALFTMMQNEGLRPNYVTFLGVLSACSHAGLVN 328

Query: 531 EGDEIFQSMI--HDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALL 588
           EG   F  M+  +D   +P  EHYACMVD+LGR+G LE+A EFIK + VEP   +WGALL
Sbjct: 329 EGKRYFSLMVRLNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMRVEPDTGIWGALL 388

Query: 589 GACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAK 648
           GAC +H+D  L +  ++ L E  P+   YHVLLSNIY+A   +     VR  ++K    K
Sbjct: 389 GACAVHRDMILGQKVADVLVETAPDIGSYHVLLSNIYAAAGKWDCVDKVRSKMRKLGTKK 448

Query: 649 APGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEE 708
               + +E  G  H F  GD  HPQS AIY  L+++  K+R  G+  +T +  HDVE EE
Sbjct: 449 VAAYSSVEFDGKIHFFNRGDISHPQSKAIYEKLDEILKKIRNMGYVPDTGSVFHDVEMEE 508

Query: 709 KELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDAN 768
           KE  +  HSEKLAIAFGLI    G  IR++KNLR C DCH  +KF+S++T R I++RD N
Sbjct: 509 KESSLSHHSEKLAIAFGLINGRAGHPIRVMKNLRTCDDCHVFSKFVSRLTSREIIMRDKN 568

Query: 769 RFHHFKGG 776
           RFHHF+ G
Sbjct: 569 RFHHFRNG 576



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 124/439 (28%), Positives = 210/439 (47%), Gaps = 34/439 (7%)

Query: 1   MSMKTPQSRNLFLSLLKGAKTQ-SQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCY 59
           ++ +TP ++ +   LL+ + ++  QL + HA +I  GF    S +T+L   L      CY
Sbjct: 2   LAKQTPLTKQMLSELLRASSSKPKQLKKIHAVVIRTGFSEKNSLLTQLLENLVLVGDMCY 61

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           AR +F  +PKP +FL+N + +G+  N++P  S+  Y  +R +  + PD FTY FV+ A S
Sbjct: 62  ARQVFDEMPKPRIFLWNTLFKGYVRNQLPFESVLLYKKMR-DLGVRPDEFTYPFVVKAIS 120

Query: 120 ACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNS 179
                  GV LH H + +G+     V   LV +Y KF  + SA  +F+ M  KD V WN+
Sbjct: 121 QLGVLPCGVSLHAHVLKNGFECLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNA 180

Query: 180 MISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKL 239
            I+  ++      ++  F  M  +     DS +V ++L A  ++  L +G EI     K 
Sbjct: 181 FIAVCVQTGNSAIALEYFNKMCAD-AVQFDSFTVVSMLSACGQLGSLDIGEEIYDRARKE 239

Query: 240 GFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLF 299
               ++ V    +  + KCG  E A +LF D+ + +++S + MI GY  NG +  +L LF
Sbjct: 240 EIECNIIVENARLDMHLKCGSTEAARVLFDDMKQRNVVSWSTMIVGYAMNGDSGEALALF 299

Query: 300 RQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRL 359
             +     R N  T +G++                S C  +G+V+      +L     RL
Sbjct: 300 TMMQNEGLRPNYVTFLGVL----------------SACSHAGLVNEGKRYFSLMV---RL 340

Query: 360 NEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSIL 419
           N         D++ E     +  M+    ++GL EEA    ++M   +V P+     ++L
Sbjct: 341 N---------DKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKM---RVEPDTGIWGALL 388

Query: 420 SACAQLGAISLGKWVHELV 438
            ACA    + LG+ V +++
Sbjct: 389 GACAVHRDMILGQKVADVL 407



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 101/334 (30%), Positives = 166/334 (49%), Gaps = 5/334 (1%)

Query: 162 ARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVA 221
           AR+VFD+MP+    LWN++  G ++N    +S+ ++  M R+ G   D  +   V+ A++
Sbjct: 62  ARQVFDEMPKPRIFLWNTLFKGYVRNQLPFESVLLYKKM-RDLGVRPDEFTYPFVVKAIS 120

Query: 222 EVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNA 281
           ++  L  G+ +    LK GF     V T LV  Y K GE+  AE LF  +   DL++ NA
Sbjct: 121 QLGVLPCGVSLHAHVLKNGFECLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNA 180

Query: 282 MISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSG 341
            I+     G +  +L  F ++ A A + +S T+V ++      G L +   I+    K  
Sbjct: 181 FIAVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLDIGEEIYDRARKEE 240

Query: 342 IVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQ 401
           I  N  V  A   ++ +    EAAR LFD+  ++++ SW+ MI GY  NG + EA++LF 
Sbjct: 241 IECNIIVENARLDMHLKCGSTEAARVLFDDMKQRNVVSWSTMIVGYAMNGDSGEALALFT 300

Query: 402 EMQASKVAPNPVTVSSILSACAQLGAISLGKWVHEL---VKSRNFESNIYVSTALIDMYA 458
            MQ   + PN VT   +LSAC+  G ++ GK    L   +  +N E        ++D+  
Sbjct: 301 MMQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVRLNDKNLEPRKEHYACMVDLLG 360

Query: 459 KCGNIVEARELFDLMSHKSEV-TWNTMISGYGLH 491
           + G + EA E    M  + +   W  ++    +H
Sbjct: 361 RSGLLEEAYEFIKKMRVEPDTGIWGALLGACAVH 394



 Score = 55.8 bits (133), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 42/169 (24%), Positives = 79/169 (46%), Gaps = 2/169 (1%)

Query: 432 KWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLH 491
           K +H +V    F     + T L++     G++  AR++FD M       WNT+  GY  +
Sbjct: 28  KKIHAVVIRTGFSEKNSLLTQLLENLVLVGDMCYARQVFDEMPKPRIFLWNTLFKGYVRN 87

Query: 492 GHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEH 551
               E++ L+ +M   G+RP   T+  V+ A S  G++  G  +   ++ + GF+ L   
Sbjct: 88  QLPFESVLLYKKMRDLGVRPDEFTYPFVVKAISQLGVLPCGVSLHAHVLKN-GFECLGIV 146

Query: 552 YACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLA 600
              +V +  + G+L  A    + + V+   A W A +  C+   ++ +A
Sbjct: 147 ATELVMMYMKFGELSSAEFLFESMQVKDLVA-WNAFIAVCVQTGNSAIA 194


>gi|359479914|ref|XP_002268148.2| PREDICTED: uncharacterized protein LOC100250295 [Vitis vinifera]
          Length = 1130

 Score =  417 bits (1073), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 214/531 (40%), Positives = 310/531 (58%), Gaps = 35/531 (6%)

Query: 289 NGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSV 348
            G T S + +F ++     + +  T   L+  F     LHL   +H+  L+ G+  +  V
Sbjct: 42  TGPTHSPISIFVRMRFHGVQPDFHTFPFLLQSFASPSLLHLGRSVHAQILRFGLAIDPFV 101

Query: 349 LTALSTVYSRLNEMEAARKLFDESSEKSLASWNA-------------------------- 382
            T+L ++YS    +  AR++FDE  +  L SWN+                          
Sbjct: 102 QTSLISMYSSCGNLGFARQVFDEIPQPDLPSWNSIINANFQAGLVDMARNLFAVMPERNV 161

Query: 383 -----MIAGYTQNGLTEEAISLFQEMQ---ASKVAPNPVTVSSILSACAQLGAISLGKWV 434
                MI GY + G  +EA++LF+EMQ    + V PN  T+S +L+AC +LGA+  GKW 
Sbjct: 162 ISWSCMINGYVRCGQYKEALALFREMQMLGVNDVRPNEFTMSGVLAACGRLGALEHGKWA 221

Query: 435 HELVKSRNFESNIYVSTALIDMYAKCGNIVEARELF-DLMSHKSEVTWNTMISGYGLHGH 493
           H  +       ++ + TALIDMYAKCG++ +A  +F +L  +K  + W+ MISG  +HG 
Sbjct: 222 HAYIDKCGMPVDVVLGTALIDMYAKCGSVEKATWVFSNLGPNKDVMAWSAMISGLAMHGL 281

Query: 494 GLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYA 553
             E + LFS+M++ G+RP+ VTFL+V  AC H GLV EG +  + M  D+   P  +HY 
Sbjct: 282 AEECVGLFSKMINQGVRPNAVTFLAVFCACVHGGLVSEGKDYLRRMTEDYSIIPTIQHYG 341

Query: 554 CMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPE 613
           CMVD+ GRAG++++A   +K + +EP   VWGALL    +H D     +A +KL EL+P 
Sbjct: 342 CMVDLYGRAGRIKEAWNVVKSMPMEPDVLVWGALLSGSRMHGDIETCELALKKLIELEPT 401

Query: 614 NVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQ 673
           N G +VLLSN+Y+    +     VR +++   + K PGC+LIEVGG  H F  GD  HP+
Sbjct: 402 NSGAYVLLSNVYAKRGRWEDVRHVRDLMETMGIKKVPGCSLIEVGGVLHEFFVGDDSHPE 461

Query: 674 STAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGT 733
           +  I+ MLE++  +++  G+   T   L D++EE KEL + +HSEKLA+A+G + T PGT
Sbjct: 462 TRQIHMMLEEILERLKVEGYVGNTKEVLLDLDEEGKELALSLHSEKLALAYGFLKTSPGT 521

Query: 734 EIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
            IRI+KNLR+C DCH A K ISKV  R I+VRD NRFHHF  G+CSC DYW
Sbjct: 522 PIRIVKNLRICRDCHVAIKMISKVFDREIIVRDCNRFHHFTQGLCSCRDYW 572



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 105/451 (23%), Positives = 190/451 (42%), Gaps = 76/451 (16%)

Query: 63  LFFSIPKPDLFLFNVIIRG-FSNNEMPK----SSICFYTHLRKNTALTPDNFTYSFVLSA 117
           L FS P  + FL+N +IR        P     S I  +  +R +  + PD  T+ F+L +
Sbjct: 15  LHFSHPTLESFLWNTLIRAHVQARAQPTGPTHSPISIFVRMRFH-GVQPDFHTFPFLLQS 73

Query: 118 ASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDK--------- 168
            ++     +G  +H   +  G   D FV  +L+ +Y     +  AR+VFD+         
Sbjct: 74  FASPSLLHLGRSVHAQILRFGLAIDPFVQTSLISMYSSCGNLGFARQVFDEIPQPDLPSW 133

Query: 169 ----------------------MPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNG-- 204
                                 MPE++ + W+ MI+G ++   +++++ +F +M   G  
Sbjct: 134 NSIINANFQAGLVDMARNLFAVMPERNVISWSCMINGYVRCGQYKEALALFREMQMLGVN 193

Query: 205 GTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERA 264
               +  +++ VL A   +  L  G        K G    V + T L+  Y+KCG VE+A
Sbjct: 194 DVRPNEFTMSGVLAACGRLGALEHGKWAHAYIDKCGMPVDVVLGTALIDMYAKCGSVEKA 253

Query: 265 ELLFRDI-VRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYP 323
             +F ++    D+++ +AMISG   +G  E  + LF +++    R N+ T + +      
Sbjct: 254 TWVFSNLGPNKDVMAWSAMISGLAMHGLAEECVGLFSKMINQGVRPNAVTFLAV------ 307

Query: 324 FGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAM 383
                   C+H      G+VS             R+ E        D S   ++  +  M
Sbjct: 308 -----FCACVH-----GGLVSEG------KDYLRRMTE--------DYSIIPTIQHYGCM 343

Query: 384 IAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKW-VHELVKSRN 442
           +  Y + G  +EA ++ + M    + P+ +   ++LS     G I   +  + +L++   
Sbjct: 344 VDLYGRAGRIKEAWNVVKSM---PMEPDVLVWGALLSGSRMHGDIETCELALKKLIELEP 400

Query: 443 FESNIYVSTALIDMYAKCGNIVEARELFDLM 473
             S  YV   L ++YAK G   + R + DLM
Sbjct: 401 TNSGAYV--LLSNVYAKRGRWEDVRHVRDLM 429


>gi|356537880|ref|XP_003537434.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g48910-like [Glycine max]
          Length = 638

 Score =  417 bits (1073), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 227/631 (35%), Positives = 343/631 (54%), Gaps = 56/631 (8%)

Query: 156 FSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQ-DSIWVFGDMVRNGGTWLDSTSVA 214
           F  +  A  VFD++PE++   WN++I  L +      D++ VF  M+       +  +  
Sbjct: 62  FRDIGYALSVFDQLPERNCFAWNTVIRALAETQDRHLDALLVFCQMLSEATVEPNQFTFP 121

Query: 215 AVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRP 274
           +VL A A +  L  G ++  L LK G  D  +V+T L+                      
Sbjct: 122 SVLKACAVMARLAEGKQVHGLLLKFGLVDDEFVVTNLLRM-------------------- 161

Query: 275 DLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIH 334
                      Y   G  E +  LF + +   + V                     N + 
Sbjct: 162 -----------YVMCGSMEDANVLFYRNVEGVDDVR--------------------NLVR 190

Query: 335 SFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTE 394
               + G   N  +   +   Y+R+  ++AAR+LFD  +++S+ SWN MI+GY QNG  +
Sbjct: 191 D---ERGREFNVVLCNVMVDGYARVGNLKAARELFDRMAQRSVVSWNVMISGYAQNGFYK 247

Query: 395 EAISLFQEM-QASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTAL 453
           EAI +F  M Q   V PN VT+ S+L A ++LG + LGKWVH   +      +  + +AL
Sbjct: 248 EAIEIFHRMMQMGDVLPNRVTLVSVLPAISRLGVLELGKWVHLYAEKNKIRIDDVLGSAL 307

Query: 454 IDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSG 513
           +DMYAKCG+I +A ++F+ +   + +TWN +I G  +HG   +     S M   GI PS 
Sbjct: 308 VDMYAKCGSIEKAIQVFERLPQNNVITWNAVIGGLAMHGKANDIFNYLSRMEKCGISPSD 367

Query: 514 VTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIK 573
           VT++++L ACSHAGLV EG   F  M++  G KP  EHY CMVD+LGRAG LE+A E I 
Sbjct: 368 VTYIAILSACSHAGLVDEGRSFFNDMVNSVGLKPKIEHYGCMVDLLGRAGYLEEAEELIL 427

Query: 574 GLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQ 633
            + ++P   +W ALLGA  +HK+  +   A+E L ++ P + G +V LSN+Y++  ++  
Sbjct: 428 NMPMKPDDVIWKALLGASKMHKNIKIGMRAAEVLMQMAPHDSGAYVALSNMYASSGNWDG 487

Query: 634 AATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGF 693
            A VR ++K   + K PGC+ IE+ G  H F   D  H ++  I++MLE+++ K+   G 
Sbjct: 488 VAAVRLMMKDMDIRKDPGCSWIEIDGVIHEFLVEDDSHSRAKDIHSMLEEISNKLSLEGH 547

Query: 694 QTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKF 753
             +T   L  ++E+ KE ++  HSEK+A+AFGLI+T P T + I+KNLR+C DCH++ K 
Sbjct: 548 MPDTTQVLLKMDEKHKESVLHYHSEKIAVAFGLISTPPKTPLCIVKNLRICEDCHSSMKL 607

Query: 754 ISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           ISK+  R IV+RD  RFHHF+ G CSC DYW
Sbjct: 608 ISKMYERKIVIRDRKRFHHFEHGSCSCMDYW 638



 Score =  119 bits (297), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 115/499 (23%), Positives = 206/499 (41%), Gaps = 88/499 (17%)

Query: 16  LKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLS---DFKATCYARALFFSIPKPDL 72
           +K  K+  +L Q HA ++  G  +D +  T++  RLS   DF+   YA ++F  +P+ + 
Sbjct: 22  IKACKSMRELKQVHAFLVKTGQTHDNAIATEIL-RLSATSDFRDIGYALSVFDQLPERNC 80

Query: 73  FLFNVIIRGFSNNEMPK-SSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLH 131
           F +N +IR  +  +     ++  +  +     + P+ FT+  VL A +     + G  +H
Sbjct: 81  FAWNTVIRALAETQDRHLDALLVFCQMLSEATVEPNQFTFPSVLKACAVMARLAEGKQVH 140

Query: 132 GHAIVSGYGSDLFVGAAL------------------------------------------ 149
           G  +  G   D FV   L                                          
Sbjct: 141 GLLLKFGLVDDEFVVTNLLRMYVMCGSMEDANVLFYRNVEGVDDVRNLVRDERGREFNVV 200

Query: 150 -----VDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNG 204
                VD Y +   +K+AR++FD+M ++  V WN MISG  +N  ++++I +F  M++ G
Sbjct: 201 LCNVMVDGYARVGNLKAARELFDRMAQRSVVSWNVMISGYAQNGFYKEAIEIFHRMMQMG 260

Query: 205 GTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERA 264
               +  ++ +VLPA++ +  L LG  +     K        + + LV  Y+KCG +E+A
Sbjct: 261 DVLPNRVTLVSVLPAISRLGVLELGKWVHLYAEKNKIRIDDVLGSALVDMYAKCGSIEKA 320

Query: 265 ELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPF 324
             +F  + + ++I+ NA+I G   +GK         ++       +  T + ++      
Sbjct: 321 IQVFERLPQNNVITWNAVIGGLAMHGKANDIFNYLSRMEKCGISPSDVTYIAIL------ 374

Query: 325 GHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMI 384
                     S C  +G+V             S  N+M  +  L     +  +  +  M+
Sbjct: 375 ----------SACSHAGLVDEGR---------SFFNDMVNSVGL-----KPKIEHYGCMV 410

Query: 385 AGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHE-LVKSRNF 443
               + G  EEA  L   M    + P+ V   ++L A      I +G    E L++    
Sbjct: 411 DLLGRAGYLEEAEELILNM---PMKPDDVIWKALLGASKMHKNIKIGMRAAEVLMQMAPH 467

Query: 444 ESNIYVSTALIDMYAKCGN 462
           +S  YV  AL +MYA  GN
Sbjct: 468 DSGAYV--ALSNMYASSGN 484



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 92/349 (26%), Positives = 158/349 (45%), Gaps = 66/349 (18%)

Query: 333 IHSFCLKSGIVSNSSVLTALS--TVYSRLNEMEAARKLFDESSEKSLASWNAMIAGY--T 388
           +H+F +K+G   ++++ T +   +  S   ++  A  +FD+  E++  +WN +I     T
Sbjct: 34  VHAFLVKTGQTHDNAIATEILRLSATSDFRDIGYALSVFDQLPERNCFAWNTVIRALAET 93

Query: 389 QNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIY 448
           Q+   +  +   Q +  + V PN  T  S+L ACA +  ++ GK VH L+       + +
Sbjct: 94  QDRHLDALLVFCQMLSEATVEPNQFTFPSVLKACAVMARLAEGKQVHGLLLKFGLVDDEF 153

Query: 449 VSTALIDMYAKC-----------------------------------------------G 461
           V T L+ MY  C                                               G
Sbjct: 154 VVTNLLRMYVMCGSMEDANVLFYRNVEGVDDVRNLVRDERGREFNVVLCNVMVDGYARVG 213

Query: 462 NIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSG-IRPSGVTFLSVL 520
           N+  ARELFD M+ +S V+WN MISGY  +G   EA+++F  M+  G + P+ VT +SVL
Sbjct: 214 NLKAARELFDRMAQRSVVSWNVMISGYAQNGFYKEAIEIFHRMMQMGDVLPNRVTLVSVL 273

Query: 521 YACSHAGLVREGDEIFQSMIHDHGFKPLAEHY--ACMVDILGRAGQLEKALEFIKGLAVE 578
            A S  G++  G  +    ++    K   +    + +VD+  + G +EKA++  + L  +
Sbjct: 274 PAISRLGVLELGKWVH---LYAEKNKIRIDDVLGSALVDMYAKCGSIEKAIQVFERLP-Q 329

Query: 579 PGPAVWGALLGACMIHKDTN-----LARVASEKLFELDPENVGYHVLLS 622
                W A++G   +H   N     L+R+  EK   + P +V Y  +LS
Sbjct: 330 NNVITWNAVIGGLAMHGKANDIFNYLSRM--EKC-GISPSDVTYIAILS 375


>gi|302801035|ref|XP_002982274.1| hypothetical protein SELMODRAFT_116224 [Selaginella moellendorffii]
 gi|300149866|gb|EFJ16519.1| hypothetical protein SELMODRAFT_116224 [Selaginella moellendorffii]
          Length = 920

 Score =  417 bits (1073), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 286/793 (36%), Positives = 410/793 (51%), Gaps = 47/793 (5%)

Query: 19  AKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARAL--FFSIPKPDLFLFN 76
           A + +Q    H  I     + DL   T L       K  C   AL  F  I  PDL  +N
Sbjct: 148 APSIAQARIVHDDIRGSDLERDLFVATALLDAYG--KCGCVESALEVFSRIQVPDLICWN 205

Query: 77  VIIRGFS-NNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRS---IGVLLHG 132
             I   + N+E P  ++     +     L P+  ++  +LS+   C D S   +   +H 
Sbjct: 206 AAIMACAGNDERPDRALLLVRRMWLE-GLLPNRASFVAILSS---CGDHSSLPLARSIHA 261

Query: 133 HAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQD 192
                G+  D+ V  ALV +Y +   V  +  VF+ M  ++ V WN+MI+   + C  + 
Sbjct: 262 RVEELGFLGDVVVATALVTMYGRCGSVDESIAVFEAMAVRNHVSWNAMIAAFAQ-CGHRS 320

Query: 193 SIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGME------IQCLGLKLGFHDHVY 246
           + +     ++  G   +  +    L A        LG        I C GL+      V 
Sbjct: 321 AAFAIYWRMQQEGFRPNKITFVTALKAACSSSSQDLGESAALHGWIACAGLE----GDVM 376

Query: 247 VLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLF----RQL 302
           V T LV+ Y   G ++RA   F  I   +++S NAM++ Y  NG+   ++ LF    RQ 
Sbjct: 377 VGTALVTMYGSTGAIDRARAAFDAIPAKNIVSWNAMLTAYGDNGRAREAMELFAAMKRQS 436

Query: 303 LASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSN-SSVLTALSTVYSRLNE 361
           LA  +       V  + V      +     IH+  + +G+ +  SS+   +  +++R   
Sbjct: 437 LAPNK-------VSYLAVLGCCEDVSEARSIHAEVVGNGLFAQESSIANGVVRMFARSGS 489

Query: 362 MEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSA 421
           +E A   FD +  K   SWN  +A  +       AI+ F  MQ     P+  T+ S++  
Sbjct: 490 LEEAVAAFDATVVKDSVSWNTKVAALSAREDLHGAITAFYTMQHEGFRPDKFTLVSVVDV 549

Query: 422 CAQLGAISLGKWVHE-LVKSRNFESNIYVSTALIDMYAKCGNIV-EARELFDLM--SHKS 477
           CA LG + LG+ + + L  +   E ++ V++A+++M AKCG+ V E   LF  M    K 
Sbjct: 550 CADLGTLELGRSIQQQLSAAIEVERDVVVASAVMNMVAKCGSSVDECERLFARMPDDRKD 609

Query: 478 EVTWNTMISGYGLHGHGLEALQLFSEMLH-SGIRPSGVTFLSVLYACSHAGLVREGDEIF 536
            V WNTMI+ Y  HGHG +AL+LF  M   S +RP   TF+SVL  CSHAGLV +G   F
Sbjct: 610 LVAWNTMIAAYAQHGHGRKALKLFRIMQQRSSVRPDSSTFVSVLSGCSHAGLVEDGIHCF 669

Query: 537 QSMIHDHGF--KPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIH 594
                  G   +P+ EHYAC+VD+LGR G L +A +FI+ + +     VW +LLGAC  +
Sbjct: 670 FLAREVLGIEQQPV-EHYACLVDVLGRMGYLREAEDFIRKMPLPADSVVWTSLLGACSSY 728

Query: 595 KDTNLARVASEKLFEL-DPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAK-APGC 652
            D      A+    EL   ++VGY V+LSNIY+A   +  +  VR+ + +R++ K  PG 
Sbjct: 729 GDLEGGERAARAFIELYRSDSVGY-VVLSNIYAAAGRWEDSIRVREDMAERRVKKRVPGK 787

Query: 653 TLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELM 712
           + I V    H F + D+ HPQS AIYA LE+L G +REAG+  +T   LHDVEEE+KE +
Sbjct: 788 SSIVVKNRVHEFFARDRSHPQSDAIYAELERLKGLIREAGYVPDTRLVLHDVEEEQKEQL 847

Query: 713 MKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHH 772
           +  HSEKLAIAFGLI+      IR+IKNLRVC DCHTATKFI++VT R I VRD NRFHH
Sbjct: 848 LWYHSEKLAIAFGLISVPHRHSIRVIKNLRVCKDCHTATKFIARVTQREIAVRDCNRFHH 907

Query: 773 F-KGGVCSCGDYW 784
           F K G CSCGDYW
Sbjct: 908 FGKDGECSCGDYW 920



 Score =  109 bits (273), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 96/388 (24%), Positives = 162/388 (41%), Gaps = 21/388 (5%)

Query: 251 LVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVN 310
           LV  YSKC  ++ A   F  +    + + N +I+  +            +    +  R N
Sbjct: 65  LVQMYSKCRSLDDANAAFSALRSRGIATWNTLIAAQSSPAAVFDLYTRMKLEERAENRPN 124

Query: 311 SSTIV---GLIPVFYPFG-------HLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLN 360
             TI+   G I    P          +     +H     S +  +  V TAL   Y +  
Sbjct: 125 KLTIIAVLGAIASGDPSSSSSSRAPSIAQARIVHDDIRGSDLERDLFVATALLDAYGKCG 184

Query: 361 EMEAARKLFDESSEKSLASWNAMIAGYTQNG-LTEEAISLFQEMQASKVAPNPVTVSSIL 419
            +E+A ++F       L  WNA I     N    + A+ L + M    + PN  +  +IL
Sbjct: 185 CVESALEVFSRIQVPDLICWNAAIMACAGNDERPDRALLLVRRMWLEGLLPNRASFVAIL 244

Query: 420 SACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEV 479
           S+C    ++ L + +H  V+   F  ++ V+TAL+ MY +CG++ E+  +F+ M+ ++ V
Sbjct: 245 SSCGDHSSLPLARSIHARVEELGFLGDVVVATALVTMYGRCGSVDESIAVFEAMAVRNHV 304

Query: 480 TWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLY-ACSHAGLVREGDEIFQS 538
           +WN MI+ +   GH   A  ++  M   G RP+ +TF++ L  ACS +            
Sbjct: 305 SWNAMIAAFAQCGHRSAAFAIYWRMQQEGFRPNKITFVTALKAACSSSSQDLGESAALHG 364

Query: 539 MIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTN 598
            I   G +        +V + G  G +++A      +  +     W A+L A   + D  
Sbjct: 365 WIACAGLEGDVMVGTALVTMYGSTGAIDRARAAFDAIPAK-NIVSWNAMLTA---YGDNG 420

Query: 599 LARVASE-----KLFELDPENVGYHVLL 621
            AR A E     K   L P  V Y  +L
Sbjct: 421 RAREAMELFAAMKRQSLAPNKVSYLAVL 448



 Score = 89.4 bits (220), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 67/292 (22%), Positives = 131/292 (44%), Gaps = 19/292 (6%)

Query: 313 TIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDES 372
           T+ GL+        L     +H   +K G+  N  +   L  +YS+   ++ A   F   
Sbjct: 26  TLAGLLRRCIGDADLAQGRQLHRQIVKQGLARNDLLGNYLVQMYSKCRSLDDANAAFSAL 85

Query: 373 SEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACA--------- 423
             + +A+WN +IA  +      +  +  +  + ++  PN +T+ ++L A A         
Sbjct: 86  RSRGIATWNTLIAAQSSPAAVFDLYTRMKLEERAENRPNKLTIIAVLGAIASGDPSSSSS 145

Query: 424 -QLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWN 482
            +  +I+  + VH+ ++  + E +++V+TAL+D Y KCG +  A E+F  +     + WN
Sbjct: 146 SRAPSIAQARIVHDDIRGSDLERDLFVATALLDAYGKCGCVESALEVFSRIQVPDLICWN 205

Query: 483 TMI-SGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYAC---SHAGLVREGDEIFQS 538
             I +  G       AL L   M   G+ P+  +F+++L +C   S   L R       +
Sbjct: 206 AAIMACAGNDERPDRALLLVRRMWLEGLLPNRASFVAILSSCGDHSSLPLARS----IHA 261

Query: 539 MIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGA 590
            + + GF         +V + GR G +++++   + +AV      W A++ A
Sbjct: 262 RVEELGFLGDVVVATALVTMYGRCGSVDESIAVFEAMAVR-NHVSWNAMIAA 312



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 46/196 (23%), Positives = 82/196 (41%), Gaps = 28/196 (14%)

Query: 414 TVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLM 473
           T++ +L  C     ++ G+ +H  +  +    N  +   L+ MY+KC ++ +A   F  +
Sbjct: 26  TLAGLLRRCIGDADLAQGRQLHRQIVKQGLARNDLLGNYLVQMYSKCRSLDDANAAFSAL 85

Query: 474 SHKSEVTWNTMISGYGLHGHGLEALQLFSEML---HSGIRPSGVTFLSVLYACSHAGLVR 530
             +   TWNT+I+             L++ M     +  RP+ +T ++VL      G + 
Sbjct: 86  RSRGIATWNTLIAA---QSSPAAVFDLYTRMKLEERAENRPNKLTIIAVL------GAIA 136

Query: 531 EGD----------EIFQS-MIHDHGFKPLAEH----YACMVDILGRAGQLEKALEFIKGL 575
            GD           I Q+ ++HD       E        ++D  G+ G +E ALE    +
Sbjct: 137 SGDPSSSSSSRAPSIAQARIVHDDIRGSDLERDLFVATALLDAYGKCGCVESALEVFSRI 196

Query: 576 AVEPGPAVWGALLGAC 591
            V P    W A + AC
Sbjct: 197 QV-PDLICWNAAIMAC 211


>gi|357121739|ref|XP_003562575.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like [Brachypodium distachyon]
          Length = 770

 Score =  417 bits (1073), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 234/668 (35%), Positives = 366/668 (54%), Gaps = 15/668 (2%)

Query: 130 LHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCC 189
           LHGH + +G   D+FV  +LV++Y +    + AR +FD+MPEK+ V W ++I+G   N  
Sbjct: 100 LHGHMVKTGTIVDIFVATSLVNVYMRCGNSQDARNLFDEMPEKNVVTWTALITGYTLNSQ 159

Query: 190 FQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLT 249
              ++ VF +M++ G    D T +  +L A      + LG ++    +K G      +  
Sbjct: 160 PVLALEVFVEMLKLGRYPSDYT-LGGMLSACVASHNIDLGKQVHGYTIKYGAASITSIGN 218

Query: 250 GLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCN-GKTESSLRLFRQLLASAER 308
            L   Y+K G +E     F+ I   ++I+   MIS    +   TE  L LF  +L     
Sbjct: 219 SLCRLYTKSGNLESGIRAFKRIPDKNVITWTTMISACAEDENYTELGLNLFLDMLKGEVM 278

Query: 309 VNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKL 368
            N  T+  ++ +      ++L   +  FC K G  +N  V  +   +Y R  E E A +L
Sbjct: 279 PNEFTLTSVMSLCGTSLDMNLGKQVQGFCFKIGCATNLPVKNSTMYLYLRKGETEEAMRL 338

Query: 369 FDESSEKSLASWNAMIAGYTQ-----------NGLTEEAISLFQEMQASKVAPNPVTVSS 417
           F+E  + S+ +WNAMI+G+ Q                +A+ +F+++  S + P+  T SS
Sbjct: 339 FEEMEDNSVITWNAMISGFAQIMDSAKDDLHARSRGFQALKIFRDLVRSAMKPDLFTFSS 398

Query: 418 ILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKS 477
           ILS C+ + A+  G+ +H       F S++ V++AL++MY KCG I  A + F  M  ++
Sbjct: 399 ILSVCSTMMALEQGEQIHAQTIKTGFLSDVVVNSALVNMYNKCGCIEYATKAFVEMPTRT 458

Query: 478 EVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQ 537
            VTW +MISGY  HG   +A+QLF +M+ +G +P+ +TF+S+L ACS+AGLV E    F 
Sbjct: 459 LVTWTSMISGYSQHGRPHDAIQLFEDMILAGAKPNEITFVSLLSACSYAGLVEEAMRYFD 518

Query: 538 SMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDT 597
            M +++  +PL +HY CM+D+  R G+L+ A  FIK    EP  A+W +L+  C  H + 
Sbjct: 519 MMQNEYHIEPLMDHYGCMIDMFVRLGRLDDAYAFIKRKGFEPNEAIWSSLVAGCRSHGNM 578

Query: 598 NLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEV 657
            LA  A+++L EL P+ V  +VLL N+Y +   +   A VR++ K   L      + I +
Sbjct: 579 ELAFYAADRLLELKPKVVETYVLLLNMYISTGRWRDVARVRKLSKHEDLGILRDRSWITI 638

Query: 658 GGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELM--MKV 715
               + F + D+ HPQST +Y +LE L  K +  G++    T L+D EE+ K     +K 
Sbjct: 639 RDKVYFFKADDRSHPQSTELYQLLETLLEKAKAIGYEPYQNTELYDSEEDGKPAAGSLKH 698

Query: 716 HSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKG 775
           HSE+LA+A GL+   PG  +RI KN+ +C DCH++ KF S +  R IVVRD+ R H FK 
Sbjct: 699 HSERLAVALGLLKAPPGVTVRITKNITMCRDCHSSIKFFSLLANREIVVRDSKRLHKFKD 758

Query: 776 GVCSCGDY 783
           G CSCGD+
Sbjct: 759 GRCSCGDF 766



 Score =  173 bits (438), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 121/479 (25%), Positives = 237/479 (49%), Gaps = 16/479 (3%)

Query: 29  HAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNEMP 88
           H  ++  G   D+   T L +       +  AR LF  +P+ ++  +  +I G++ N  P
Sbjct: 101 HGHMVKTGTIVDIFVATSLVNVYMRCGNSQDARNLFDEMPEKNVVTWTALITGYTLNSQP 160

Query: 89  KSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAA 148
             ++  +  + K     P ++T   +LSA  A  +  +G  +HG+ I  G  S   +G +
Sbjct: 161 VLALEVFVEMLK-LGRYPSDYTLGGMLSACVASHNIDLGKQVHGYTIKYGAASITSIGNS 219

Query: 149 LVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQD-SIWVFGDMVRNGGTW 207
           L  LY K   ++S  + F ++P+K+ + W +MIS   ++  + +  + +F DM++ G   
Sbjct: 220 LCRLYTKSGNLESGIRAFKRIPDKNVITWTTMISACAEDENYTELGLNLFLDMLK-GEVM 278

Query: 208 LDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELL 267
            +  ++ +V+       ++ LG ++Q    K+G   ++ V    +  Y + GE E A  L
Sbjct: 279 PNEFTLTSVMSLCGTSLDMNLGKQVQGFCFKIGCATNLPVKNSTMYLYLRKGETEEAMRL 338

Query: 268 FRDIVRPDLISCNAMISGYT-----------CNGKTESSLRLFRQLLASAERVNSSTIVG 316
           F ++    +I+ NAMISG+               +   +L++FR L+ SA + +  T   
Sbjct: 339 FEEMEDNSVITWNAMISGFAQIMDSAKDDLHARSRGFQALKIFRDLVRSAMKPDLFTFSS 398

Query: 317 LIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKS 376
           ++ V      L     IH+  +K+G +S+  V +AL  +Y++   +E A K F E   ++
Sbjct: 399 ILSVCSTMMALEQGEQIHAQTIKTGFLSDVVVNSALVNMYNKCGCIEYATKAFVEMPTRT 458

Query: 377 LASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHE 436
           L +W +MI+GY+Q+G   +AI LF++M  +   PN +T  S+LSAC+  G +       +
Sbjct: 459 LVTWTSMISGYSQHGRPHDAIQLFEDMILAGAKPNEITFVSLLSACSYAGLVEEAMRYFD 518

Query: 437 LVKSR-NFESNIYVSTALIDMYAKCGNIVEARELFDLMSHK-SEVTWNTMISGYGLHGH 493
           ++++  + E  +     +IDM+ + G + +A         + +E  W+++++G   HG+
Sbjct: 519 MMQNEYHIEPLMDHYGCMIDMFVRLGRLDDAYAFIKRKGFEPNEAIWSSLVAGCRSHGN 577



 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 76/241 (31%), Positives = 110/241 (45%), Gaps = 6/241 (2%)

Query: 289 NGKTESSLRLFRQ-----LLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIV 343
           NG+ E+  R         +L   + V S+  V L+      G L     +H   +K+G +
Sbjct: 51  NGRLEAPPRPLDAQEAMAMLKEGQSVQSAMYVPLLHRCIETGSLGGAKALHGHMVKTGTI 110

Query: 344 SNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEM 403
            +  V T+L  VY R    + AR LFDE  EK++ +W A+I GYT N     A+ +F EM
Sbjct: 111 VDIFVATSLVNVYMRCGNSQDARNLFDEMPEKNVVTWTALITGYTLNSQPVLALEVFVEM 170

Query: 404 QASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNI 463
                 P+  T+  +LSAC     I LGK VH         S   +  +L  +Y K GN+
Sbjct: 171 LKLGRYPSDYTLGGMLSACVASHNIDLGKQVHGYTIKYGAASITSIGNSLCRLYTKSGNL 230

Query: 464 VEARELFDLMSHKSEVTWNTMISGYGLHGHGLE-ALQLFSEMLHSGIRPSGVTFLSVLYA 522
                 F  +  K+ +TW TMIS      +  E  L LF +ML   + P+  T  SV+  
Sbjct: 231 ESGIRAFKRIPDKNVITWTTMISACAEDENYTELGLNLFLDMLKGEVMPNEFTLTSVMSL 290

Query: 523 C 523
           C
Sbjct: 291 C 291



 Score = 76.3 bits (186), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 64/225 (28%), Positives = 101/225 (44%), Gaps = 30/225 (13%)

Query: 10  NLFLSLLKGAKTQSQLTQTHAQII------------IHGFQNDLSTVTKLAHRLSDF--- 54
           NLFL +LKG    ++ T T    +            + GF   +   T L  + S     
Sbjct: 267 NLFLDMLKGEVMPNEFTLTSVMSLCGTSLDMNLGKQVQGFCFKIGCATNLPVKNSTMYLY 326

Query: 55  ---KATCYARALFFSIPKPDLFLFNVIIRGFSN------NEMPKSSICF-----YTHLRK 100
                T  A  LF  +    +  +N +I GF+       +++   S  F     +  L +
Sbjct: 327 LRKGETEEAMRLFEEMEDNSVITWNAMISGFAQIMDSAKDDLHARSRGFQALKIFRDLVR 386

Query: 101 NTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVK 160
            +A+ PD FT+S +LS  S       G  +H   I +G+ SD+ V +ALV++Y K   ++
Sbjct: 387 -SAMKPDLFTFSSILSVCSTMMALEQGEQIHAQTIKTGFLSDVVVNSALVNMYNKCGCIE 445

Query: 161 SARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGG 205
            A K F +MP +  V W SMISG  ++    D+I +F DM+  G 
Sbjct: 446 YATKAFVEMPTRTLVTWTSMISGYSQHGRPHDAIQLFEDMILAGA 490


>gi|12957718|gb|AAK09236.1|AC084320_23 hypothetical protein [Oryza sativa Japonica Group]
 gi|108711388|gb|ABF99183.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
          Length = 843

 Score =  417 bits (1073), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 229/675 (33%), Positives = 378/675 (56%), Gaps = 4/675 (0%)

Query: 18  GAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNV 77
           GA    +L    A+ +  G   D+   + L    ++      AR +F  + + D  L+NV
Sbjct: 160 GAIALGRLVHRTARTL--GLDGDMFVGSALIKMYANGGLLWDARQVFDGMAERDCVLWNV 217

Query: 78  IIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVS 137
           ++ G+       S++  +  +R  +   P+  T +  LS ++   D   GV LH  A+  
Sbjct: 218 MMDGYVKAGSVSSAVELFGDMRA-SGCEPNFATLACFLSVSATESDLFFGVQLHTLAVKY 276

Query: 138 GYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVF 197
           G  S++ V   LV +Y K   +    K+F  MP  D V WN MISG ++N     ++ +F
Sbjct: 277 GLESEVAVANTLVSMYAKCKCLDDGWKLFGLMPRDDLVTWNGMISGCVQNGFVDQALLLF 336

Query: 198 GDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSK 257
            DM +  G   DS ++ ++LPA+ ++     G E+    ++   H  V++++ LV  Y K
Sbjct: 337 CDM-QKSGIRPDSVTLVSLLPALTDLNGFNQGKELHGYIVRNCVHMDVFLVSALVDIYFK 395

Query: 258 CGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGL 317
           C  V  A+ ++      D++  + MISGY  NG ++ ++++FR LL    R N+  I  +
Sbjct: 396 CRAVRMAQSVYDSSKAIDVVIGSTMISGYVLNGMSQEAVKMFRYLLEQGIRPNAVAIASV 455

Query: 318 IPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSL 377
           +P       + L   +HS+ LK+       V +AL  +Y++   ++ +  +F + S K  
Sbjct: 456 LPACASMAAMKLGQELHSYALKNAYEGRCYVESALMDMYAKCGRLDLSHYIFSKISAKDE 515

Query: 378 ASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHEL 437
            +WN+MI+ + QNG  EEA++LF+EM    V  + VT+SS+LSACA L AI  GK +H +
Sbjct: 516 VTWNSMISSFAQNGEPEEALNLFREMCMEGVKYSNVTISSVLSACASLPAIYYGKEIHGV 575

Query: 438 VKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEA 497
           V      ++++  +ALIDMY KCGN+  A  +F+ M  K+EV+WN++I+ YG +G   E+
Sbjct: 576 VIKGPIRADLFAESALIDMYGKCGNLEWAHRVFESMPEKNEVSWNSIIASYGAYGLVKES 635

Query: 498 LQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVD 557
           + L   M   G +   VTFL+++ AC+HAG V+EG  +F+ M  ++   P  EH+ACMVD
Sbjct: 636 VSLLRHMQEEGFKADHVTFLALVSACAHAGQVQEGLRLFRCMTEEYQIAPRMEHFACMVD 695

Query: 558 ILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGY 617
           +  RAG+L+KA+E I  +  +P   +WGALL AC +H++  LA +AS++LF+LDP N GY
Sbjct: 696 LYSRAGKLDKAMELIVDMPFKPDAGIWGALLHACRVHRNVELAEIASQELFKLDPHNSGY 755

Query: 618 HVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAI 677
           +VL+SNI +    +   + VR+++K  K+ K PG + ++V  T H+F + D+ HP S  I
Sbjct: 756 YVLMSNINAVAGRWDGVSKVRRLMKDTKVQKIPGYSWVDVNNTSHLFVAADKSHPDSEDI 815

Query: 678 YAMLEKLNGKMREAG 692
           Y  L+ +  ++RE G
Sbjct: 816 YMSLKSILLELREEG 830



 Score =  290 bits (743), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 192/624 (30%), Positives = 319/624 (51%), Gaps = 29/624 (4%)

Query: 6   PQSRNLFLSLLKGAKTQSQLT---QTHAQIIIHGF-------QNDLSTVTKLAHRLSDFK 55
           P  R   L++L+G  + S L+   Q H + +  G        Q  L  +  LA R  D  
Sbjct: 38  PDRR--LLAVLRGCVSPSHLSLGLQVHGRAVTAGLHATDTALQTRLVGMYVLARRFRD-- 93

Query: 56  ATCYARALFFSIPKPDL---FLFNVIIRGFSNNEMPKSSICFYTHLRKN-TALTPDNFTY 111
               A A+F S+P+        +N +IRG +     +S++ FY  +  + +A  PD+ T+
Sbjct: 94  ----AVAVFSSLPRGAAACALPWNWLIRGLTMAGDYRSALLFYLKMWAHPSAPLPDSHTF 149

Query: 112 SFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPE 171
            +V+ + +A    ++G L+H  A   G   D+FVG+AL+ +Y     +  AR+VFD M E
Sbjct: 150 PYVVKSCAALGAIALGRLVHRTARTLGLDGDMFVGSALIKMYANGGLLWDARQVFDGMAE 209

Query: 172 KDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGME 231
           +D VLWN M+ G +K      ++ +FGDM R  G   +  ++A  L   A   +L  G++
Sbjct: 210 RDCVLWNVMMDGYVKAGSVSSAVELFGDM-RASGCEPNFATLACFLSVSATESDLFFGVQ 268

Query: 232 IQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGK 291
           +  L +K G    V V   LVS Y+KC  ++    LF  + R DL++ N MISG   NG 
Sbjct: 269 LHTLAVKYGLESEVAVANTLVSMYAKCKCLDDGWKLFGLMPRDDLVTWNGMISGCVQNGF 328

Query: 292 TESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTA 351
            + +L LF  +  S  R +S T+V L+P        +    +H + +++ +  +  +++A
Sbjct: 329 VDQALLLFCDMQKSGIRPDSVTLVSLLPALTDLNGFNQGKELHGYIVRNCVHMDVFLVSA 388

Query: 352 LSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPN 411
           L  +Y +   +  A+ ++D S    +   + MI+GY  NG+++EA+ +F+ +    + PN
Sbjct: 389 LVDIYFKCRAVRMAQSVYDSSKAIDVVIGSTMISGYVLNGMSQEAVKMFRYLLEQGIRPN 448

Query: 412 PVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFD 471
            V ++S+L ACA + A+ LG+ +H       +E   YV +AL+DMYAKCG +  +  +F 
Sbjct: 449 AVAIASVLPACASMAAMKLGQELHSYALKNAYEGRCYVESALMDMYAKCGRLDLSHYIFS 508

Query: 472 LMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVRE 531
            +S K EVTWN+MIS +  +G   EAL LF EM   G++ S VT  SVL AC+    +  
Sbjct: 509 KISAKDEVTWNSMISSFAQNGEPEEALNLFREMCMEGVKYSNVTISSVLSACASLPAIYY 568

Query: 532 GDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGAC 591
           G EI   +I       L    A ++D+ G+ G LE A    + +  E     W +++ + 
Sbjct: 569 GKEIHGVVIKGPIRADLFAESA-LIDMYGKCGNLEWAHRVFESMP-EKNEVSWNSIIASY 626

Query: 592 ----MIHKDTNLARVASEKLFELD 611
               ++ +  +L R   E+ F+ D
Sbjct: 627 GAYGLVKESVSLLRHMQEEGFKAD 650


>gi|302765565|ref|XP_002966203.1| hypothetical protein SELMODRAFT_86405 [Selaginella moellendorffii]
 gi|300165623|gb|EFJ32230.1| hypothetical protein SELMODRAFT_86405 [Selaginella moellendorffii]
          Length = 916

 Score =  417 bits (1073), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 285/790 (36%), Positives = 408/790 (51%), Gaps = 47/790 (5%)

Query: 22  QSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARAL--FFSIPKPDLFLFNVII 79
           ++Q    H  I     + DL   T L       K  C   AL  F  I  PDL  +N  I
Sbjct: 147 RAQARIVHDDIRGSDLERDLFVATALLDAYG--KCGCVESALEVFSRIQVPDLICWNAAI 204

Query: 80  RGFS-NNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRS---IGVLLHGHAI 135
              + N+E P  ++     +     L P+  ++  +LS+   C D S   +   +H    
Sbjct: 205 MACAGNDERPDRALLLVRRMWLE-GLLPNRASFVAILSS---CGDHSSLPLARSIHARVE 260

Query: 136 VSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIW 195
             G+  D+ V  ALV +Y +   V  +  VF+ M  ++ V WN+MI+   + C  + + +
Sbjct: 261 ELGFLGDVVVATALVTMYGRCGSVDESIAVFEAMAVRNHVSWNAMIAAFAQ-CGHRSAAF 319

Query: 196 VFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGME------IQCLGLKLGFHDHVYVLT 249
                ++  G   +  +    L A        LG        I C GL+      V V T
Sbjct: 320 AIYWRMQQEGFRPNKITFVTALKAACSSSSQDLGESAALHGWIACAGLE----GDVMVGT 375

Query: 250 GLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLF----RQLLAS 305
            LV+ Y   G ++RA   F  I   +++S NAM++ Y  NG+   ++ LF    RQ LA 
Sbjct: 376 ALVTMYGSTGAIDRARAAFDAIPAKNIVSWNAMLTAYGDNGRAREAMELFAAMKRQSLAP 435

Query: 306 AERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSN-SSVLTALSTVYSRLNEMEA 364
            +       V  + V      +     IH+  + +G+ +  SS+   +  +++R   +E 
Sbjct: 436 NK-------VSYLAVLGCCEDVSEARSIHAEVVGNGLFAQESSIANGVVRMFARSGSLEE 488

Query: 365 ARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQ 424
           A   FD +  K   SWN  +A  +       AI+ F  MQ     P+  T+ S++  CA 
Sbjct: 489 AMAAFDATVVKDSVSWNTKVAALSAREDLHGAITAFYTMQHEGFRPDKFTLVSVVDVCAD 548

Query: 425 LGAISLGKWVHE-LVKSRNFESNIYVSTALIDMYAKCGNIV-EARELFDLM--SHKSEVT 480
           LG + LG+ + + L  +   E ++ V +A+++M AKCG+ V E   LF  M    K  V 
Sbjct: 549 LGTLELGRSIQQQLSAAIEVERDVVVESAVMNMVAKCGSSVDECERLFARMPDDRKDLVA 608

Query: 481 WNTMISGYGLHGHGLEALQLFSEMLH-SGIRPSGVTFLSVLYACSHAGLVREGDEIFQSM 539
           WNTMI+ Y  HGHG +AL+LF  M   S +RP   TF+SVL  CSHAGLV +G   F   
Sbjct: 609 WNTMIAAYAQHGHGRKALKLFRIMQQRSSVRPDSSTFVSVLSGCSHAGLVEDGIHCFFLA 668

Query: 540 IHDHGF--KPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDT 597
               G   +P+ EHYAC+VD+LGR G L +A +FI+ + +     VW +LLGAC  + D 
Sbjct: 669 REVLGIEQQPV-EHYACLVDVLGRMGYLREAEDFIRKMPLPADSVVWTSLLGACSSYGDL 727

Query: 598 NLARVASEKLFEL-DPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAK-APGCTLI 655
                A+    EL   ++VGY V+LSNIY+A   +  +  VR+ + +R++ K APG + I
Sbjct: 728 EGGERAARAFIELYRSDSVGY-VVLSNIYAAAGRWEDSIRVREDMAERRVKKRAPGKSSI 786

Query: 656 EVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKV 715
            V    H F + D+ HPQS  IYA LE+L G +REAG+  +T   LHDVEEE+KE ++  
Sbjct: 787 VVKNRVHEFFARDRSHPQSDEIYAELERLKGLIREAGYVPDTRLVLHDVEEEQKEQLLWY 846

Query: 716 HSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHF-K 774
           HSEKLAIAFGLI+      IR+IKNLRVC DCHTATKFI++VT R I VRD NRFHHF K
Sbjct: 847 HSEKLAIAFGLISVPHRHSIRVIKNLRVCKDCHTATKFIARVTQREIAVRDCNRFHHFGK 906

Query: 775 GGVCSCGDYW 784
            G CSCGDYW
Sbjct: 907 DGECSCGDYW 916



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 147/538 (27%), Positives = 239/538 (44%), Gaps = 27/538 (5%)

Query: 18  GAKTQSQLTQTHAQIIIHGF-QNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFN 76
           G    +Q  Q H QI+  G  +NDL     L    S  ++   A A F ++    +  +N
Sbjct: 36  GDADLAQGRQLHRQIVKQGLARNDLLG-NYLVQMYSKCRSLDDANAAFSALRSRGIATWN 94

Query: 77  VIIRGFSNNEMPKSSICFYTHLR--KNTALTPDNFTYSFVLSAASA------CCDRSIGV 128
            +I   S+   P +    YT ++  +     P+  T   VL A ++         R+   
Sbjct: 95  TLIAAQSS---PAAVFDLYTRMKLEERAENRPNRLTIIAVLGAIASGDPSSSSSSRAQAR 151

Query: 129 LLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNC 188
           ++H     S    DLFV  AL+D Y K   V+SA +VF ++   D + WN+ I     N 
Sbjct: 152 IVHDDIRGSDLERDLFVATALLDAYGKCGCVESALEVFSRIQVPDLICWNAAIMACAGND 211

Query: 189 CFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVL 248
              D   +    +   G   +  S  A+L +  +   L L   I     +LGF   V V 
Sbjct: 212 ERPDRALLLVRRMWLEGLLPNRASFVAILSSCGDHSSLPLARSIHARVEELGFLGDVVVA 271

Query: 249 TGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAER 308
           T LV+ Y +CG V+ +  +F  +   + +S NAMI+ +   G   ++  ++ ++     R
Sbjct: 272 TALVTMYGRCGSVDESIAVFEAMAVRNHVSWNAMIAAFAQCGHRSAAFAIYWRMQQEGFR 331

Query: 309 VNSSTIVGLIPVFYPFGHLHL--TNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAAR 366
            N  T V  +          L  +  +H +   +G+  +  V TAL T+Y     ++ AR
Sbjct: 332 PNKITFVTALKAACSSSSQDLGESAALHGWIACAGLEGDVMVGTALVTMYGSTGAIDRAR 391

Query: 367 KLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLG 426
             FD    K++ SWNAM+  Y  NG   EA+ LF  M+   +APN V+  ++L  C    
Sbjct: 392 AAFDAIPAKNIVSWNAMLTAYGDNGRAREAMELFAAMKRQSLAPNKVSYLAVLGCCED-- 449

Query: 427 AISLGKWVH-ELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMI 485
            +S  + +H E+V +  F     ++  ++ M+A+ G++ EA   FD    K  V+WNT +
Sbjct: 450 -VSEARSIHAEVVGNGLFAQESSIANGVVRMFARSGSLEEAMAAFDATVVKDSVSWNTKV 508

Query: 486 SGYG----LHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSM 539
           +       LHG    A+  F  M H G RP   T +SV+  C+  G +  G  I Q +
Sbjct: 509 AALSAREDLHG----AITAFYTMQHEGFRPDKFTLVSVVDVCADLGTLELGRSIQQQL 562



 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 66/288 (22%), Positives = 129/288 (44%), Gaps = 15/288 (5%)

Query: 313 TIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDES 372
           T+ GL+        L     +H   +K G+  N  +   L  +YS+   ++ A   F   
Sbjct: 26  TLAGLLRRCIGDADLAQGRQLHRQIVKQGLARNDLLGNYLVQMYSKCRSLDDANAAFSAL 85

Query: 373 SEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQ------LG 426
             + +A+WN +IA  +      +  +  +  + ++  PN +T+ ++L A A         
Sbjct: 86  RSRGIATWNTLIAAQSSPAAVFDLYTRMKLEERAENRPNRLTIIAVLGAIASGDPSSSSS 145

Query: 427 AISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMI- 485
           + +  + VH+ ++  + E +++V+TAL+D Y KCG +  A E+F  +     + WN  I 
Sbjct: 146 SRAQARIVHDDIRGSDLERDLFVATALLDAYGKCGCVESALEVFSRIQVPDLICWNAAIM 205

Query: 486 SGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYAC---SHAGLVREGDEIFQSMIHD 542
           +  G       AL L   M   G+ P+  +F+++L +C   S   L R       + + +
Sbjct: 206 ACAGNDERPDRALLLVRRMWLEGLLPNRASFVAILSSCGDHSSLPLARS----IHARVEE 261

Query: 543 HGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGA 590
            GF         +V + GR G +++++   + +AV      W A++ A
Sbjct: 262 LGFLGDVVVATALVTMYGRCGSVDESIAVFEAMAVR-NHVSWNAMIAA 308



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 43/186 (23%), Positives = 79/186 (42%), Gaps = 12/186 (6%)

Query: 414 TVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLM 473
           T++ +L  C     ++ G+ +H  +  +    N  +   L+ MY+KC ++ +A   F  +
Sbjct: 26  TLAGLLRRCIGDADLAQGRQLHRQIVKQGLARNDLLGNYLVQMYSKCRSLDDANAAFSAL 85

Query: 474 SHKSEVTWNTMISGYGLHGHGLEALQLFSEML---HSGIRPSGVTFLSVLYACSHAGLVR 530
             +   TWNT+I+             L++ M     +  RP+ +T ++VL A +      
Sbjct: 86  RSRGIATWNTLIAA---QSSPAAVFDLYTRMKLEERAENRPNRLTIIAVLGAIASGDPSS 142

Query: 531 EGDEIFQS-MIHDHGFKPLAEH----YACMVDILGRAGQLEKALEFIKGLAVEPGPAVWG 585
                 Q+ ++HD       E        ++D  G+ G +E ALE    + V P    W 
Sbjct: 143 SSSSRAQARIVHDDIRGSDLERDLFVATALLDAYGKCGCVESALEVFSRIQV-PDLICWN 201

Query: 586 ALLGAC 591
           A + AC
Sbjct: 202 AAIMAC 207


>gi|242054799|ref|XP_002456545.1| hypothetical protein SORBIDRAFT_03g038140 [Sorghum bicolor]
 gi|241928520|gb|EES01665.1| hypothetical protein SORBIDRAFT_03g038140 [Sorghum bicolor]
          Length = 640

 Score =  417 bits (1073), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 225/573 (39%), Positives = 346/573 (60%), Gaps = 23/573 (4%)

Query: 231 EIQCLGLKLGF--HDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDL------ISCNAM 282
           +I  L  K G       Y+L+ L++ YS+ G +  A  L  ++            + N++
Sbjct: 72  QIHALAAKRGLLPAADAYLLSALLTSYSRLGCLPLAHQLLDEMPLESTPHTTLRTAFNSV 131

Query: 283 ISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGI 342
           ISG   +    +S  LFR++ A+A   ++ T++ L+P       L +   +H+   + G+
Sbjct: 132 ISGCALHALPVASFALFRRMRAAAVGFDAVTLLALVPAT----PLSVVPQVHALAARVGL 187

Query: 343 VSNSSVLTALSTVYSRLNEMEAA--RKLFDES--SEKSLASWNAMIAGYTQNGLTEEAIS 398
            + +SV   L + Y+R     AA  R++FDE   + + L SWNA+++ + QNGL  +A+ 
Sbjct: 188 ATETSVANCLMSTYARGGAFGAALARRVFDEMPLASRDLVSWNAVLSAHAQNGLAVDALE 247

Query: 399 LFQEMQA---SKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSR--NFESNIYVSTAL 453
           L++ M++   S V P+ VT+  +LS+ A LGA  +G  V   V+ R   F +N+ +  AL
Sbjct: 248 LYRRMRSPEGSGVEPDAVTIVGVLSSAAHLGARGVGFDVEHYVRQRIPGFHTNVQLCNAL 307

Query: 454 IDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSG 513
           I+ +A+CG++  A++LFD M  KS V+W  +I+G+G+HG+G  A+ LF  M+  GIRP  
Sbjct: 308 INFHARCGSLPRAQQLFDEMPRKSIVSWTALITGHGMHGNGDVAVSLFERMVSEGIRPDN 367

Query: 514 VTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIK 573
           V  +++  ACSHAGL  EG   F +M   +  +P  EHY CMVD+LGRAG+LE+A E I 
Sbjct: 368 VAMVALFSACSHAGLYDEGRRYFSAMESVYKLRPTLEHYTCMVDLLGRAGRLEEARELIS 427

Query: 574 GLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQ 633
            + +    AVWGALLGAC IHK+ ++   A  ++ EL+P+NVGY+VL+SNIY+       
Sbjct: 428 SMPMPADGAVWGALLGACKIHKNVDVGEEAFTRVIELEPKNVGYYVLMSNIYTDTGQLDC 487

Query: 634 AATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMRE-AG 692
            A VR ++++R L K PGC+ +E  G  H+F + D  HPQ+  IY ++ +L   ++E +G
Sbjct: 488 VARVRAMMRERGLKKEPGCSYVEHKGRVHLFMADDHSHPQARRIYELVIRLELMVKEKSG 547

Query: 693 F-QTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTAT 751
             ++E   A   +E+   + ++ +HSEKLA+AFGL+ TE G+EI +IKNLRVC DCH+  
Sbjct: 548 MRESEVAAAKGRMEKAAAQPLVGIHSEKLAVAFGLLNTEAGSEIVVIKNLRVCGDCHSFL 607

Query: 752 KFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           K +S  T R  +VRDA+RFH F GGVCSC DYW
Sbjct: 608 KVVSATTNRAFLVRDASRFHRFDGGVCSCKDYW 640



 Score = 92.8 bits (229), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 95/414 (22%), Positives = 183/414 (44%), Gaps = 60/414 (14%)

Query: 75  FNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHA 134
           FN +I G + + +P +S   +  +R   A+  D  T   ++ A       S+   +H  A
Sbjct: 128 FNSVISGCALHALPVASFALFRRMRA-AAVGFDAVTLLALVPATPL----SVVPQVHALA 182

Query: 135 IVSGYGSDLFVGAALVDLYFKFSWVKSA--RKVFDKMP--EKDTVLWNSMISGLMKNCCF 190
              G  ++  V   L+  Y +     +A  R+VFD+MP   +D V WN+++S   +N   
Sbjct: 183 ARVGLATETSVANCLMSTYARGGAFGAALARRVFDEMPLASRDLVSWNAVLSAHAQNGLA 242

Query: 191 QDSIWVFGDMVRNGGTWL--DSTSVAAVLPAVAEVQELRLGMEIQCLGLKL--GFHDHVY 246
            D++ ++  M    G+ +  D+ ++  VL + A +    +G +++    +   GFH +V 
Sbjct: 243 VDALELYRRMRSPEGSGVEPDAVTIVGVLSSAAHLGARGVGFDVEHYVRQRIPGFHTNVQ 302

Query: 247 VLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASA 306
           +   L++F+++CG + RA+ LF ++ R  ++S  A+I+G+  +G  + ++ LF ++++  
Sbjct: 303 LCNALINFHARCGSLPRAQQLFDEMPRKSIVSWTALITGHGMHGNGDVAVSLFERMVSEG 362

Query: 307 ERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAAR 366
            R ++  +V L            + C H+     G        +A+ +VY          
Sbjct: 363 IRPDNVAMVAL-----------FSACSHAGLYDEG----RRYFSAMESVY---------- 397

Query: 367 KLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVS---SILSACA 423
           KL       +L  +  M+    + G  EEA  L   M      P P   +   ++L AC 
Sbjct: 398 KL-----RPTLEHYTCMVDLLGRAGRLEEARELISSM------PMPADGAVWGALLGACK 446

Query: 424 QLGAISLGKWVHELV---KSRN-----FESNIYVSTALIDMYAKCGNIVEAREL 469
               + +G+     V   + +N       SNIY  T  +D  A+   ++  R L
Sbjct: 447 IHKNVDVGEEAFTRVIELEPKNVGYYVLMSNIYTDTGQLDCVARVRAMMRERGL 500


>gi|414591609|tpg|DAA42180.1| TPA: hypothetical protein ZEAMMB73_073969 [Zea mays]
          Length = 696

 Score =  417 bits (1072), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 240/643 (37%), Positives = 357/643 (55%), Gaps = 2/643 (0%)

Query: 144 FVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRN 203
           F+ A LV+LY K     +A       P    V + + ISG  ++     ++  F  M+R 
Sbjct: 54  FLCAHLVNLYSKLDLPGAAAASLAADPSPTVVSYTAFISGAAQHARPLQALSAFAAMLRL 113

Query: 204 GGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGF-HDHVYVLTGLVSFYSKCGEVE 262
           G    D T  +A   A +       G ++  L L+ G+  D  +V    +  Y K G + 
Sbjct: 114 GLRPNDFTFPSAFKAAASAPPRSAAGTQLHALALRFGYLPDDAFVSCAALDMYFKTGCLA 173

Query: 263 RAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFY 322
            A  LF ++   ++++ NA+++    +G+   ++  +  L  +    N  ++        
Sbjct: 174 LARRLFDEMPNRNVVAWNAVMTNAVLDGRPLETVEAYFGLRGAGGMPNVVSVCAFFNACA 233

Query: 323 PFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNA 382
              +L L    + F  K G   + SV  ++   Y +   +  AR +FD    ++  SW +
Sbjct: 234 GMTNLSLGEQFYGFVAKCGFGKDVSVSNSVVDFYGKCRCVGKARAVFDGMGVRNNVSWCS 293

Query: 383 MIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRN 442
           M+  Y QNG  EEA  ++   + +   P    VSS+L+ CA L  + LG+ +H +     
Sbjct: 294 MVVAYAQNGAEEEAFFVYLGARRAGEEPTDFMVSSVLTTCAGLLGLDLGRALHAVAVRSC 353

Query: 443 FESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFS 502
            +SNI+V++AL+DMY KCG I +A ++F  M  ++ VTWN MI GY   G    AL +F 
Sbjct: 354 IDSNIFVASALVDMYGKCGGIEDAEQVFFEMPQRNLVTWNAMIGGYAHIGDAHNALSVFD 413

Query: 503 EMLHSG-IRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGR 561
           +M+      P+ +T ++VL ACS  GL +EG E+FQ+M    G +P  EHYAC+VD+L R
Sbjct: 414 KMIMGQETAPNYITLVNVLTACSRGGLTKEGYELFQTMKWRFGIEPRIEHYACVVDLLCR 473

Query: 562 AGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLL 621
           AG  E+A + I+G+ + P  +VWGALLG C +H  T L R+A+EKLFELDP++ G HVLL
Sbjct: 474 AGMEERAYKIIQGMPMRPSISVWGALLGGCKMHGKTELGRIAAEKLFELDPQDSGNHVLL 533

Query: 622 SNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAML 681
           SN+ ++   + +A  VR+ +K   + K PG + I      HVF + D  H  +  I A+L
Sbjct: 534 SNMLASAGRWAEATDVRKEMKNVGIKKDPGRSWITWKNVVHVFQAKDTTHDMNREIQALL 593

Query: 682 EKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNL 741
            KL G+M+ AG+  +T  AL+D+EEEEKE  +  HSEKLA+AFGLI   PG  IRI+KNL
Sbjct: 594 AKLKGQMQAAGYMPDTQYALYDLEEEEKESEVFQHSEKLALAFGLICIPPGIPIRIMKNL 653

Query: 742 RVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           R+C+DCH A KFIS + GR I+VRD N FHHFK   CSC DYW
Sbjct: 654 RICVDCHRAFKFISGIAGREIIVRDNNMFHHFKNYECSCKDYW 696



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 119/431 (27%), Positives = 206/431 (47%), Gaps = 9/431 (2%)

Query: 68  PKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTY-SFVLSAASACCDRSI 126
           P P +  +   I G + +  P  ++  +  + +   L P++FT+ S   +AASA    + 
Sbjct: 80  PSPTVVSYTAFISGAAQHARPLQALSAFAAMLR-LGLRPNDFTFPSAFKAAASAPPRSAA 138

Query: 127 GVLLHGHAIVSGY-GSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNS-MISGL 184
           G  LH  A+  GY   D FV  A +D+YFK   +  AR++FD+MP ++ V WN+ M + +
Sbjct: 139 GTQLHALALRFGYLPDDAFVSCAALDMYFKTGCLALARRLFDEMPNRNVVAWNAVMTNAV 198

Query: 185 MKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDH 244
           +     +     FG  +R  G   +  SV A   A A +  L LG +      K GF   
Sbjct: 199 LDGRPLETVEAYFG--LRGAGGMPNVVSVCAFFNACAGMTNLSLGEQFYGFVAKCGFGKD 256

Query: 245 VYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLA 304
           V V   +V FY KC  V +A  +F  +   + +S  +M+  Y  NG  E +  ++     
Sbjct: 257 VSVSNSVVDFYGKCRCVGKARAVFDGMGVRNNVSWCSMVVAYAQNGAEEEAFFVYLGARR 316

Query: 305 SAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEA 364
           + E      +  ++        L L   +H+  ++S I SN  V +AL  +Y +   +E 
Sbjct: 317 AGEEPTDFMVSSVLTTCAGLLGLDLGRALHAVAVRSCIDSNIFVASALVDMYGKCGGIED 376

Query: 365 ARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEM-QASKVAPNPVTVSSILSACA 423
           A ++F E  +++L +WNAMI GY   G    A+S+F +M    + APN +T+ ++L+AC+
Sbjct: 377 AEQVFFEMPQRNLVTWNAMIGGYAHIGDAHNALSVFDKMIMGQETAPNYITLVNVLTACS 436

Query: 424 QLGAISLGKWVHELVKSR-NFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVT-W 481
           + G    G  + + +K R   E  I     ++D+  + G    A ++   M  +  ++ W
Sbjct: 437 RGGLTKEGYELFQTMKWRFGIEPRIEHYACVVDLLCRAGMEERAYKIIQGMPMRPSISVW 496

Query: 482 NTMISGYGLHG 492
             ++ G  +HG
Sbjct: 497 GALLGGCKMHG 507



 Score = 85.5 bits (210), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 72/288 (25%), Positives = 131/288 (45%), Gaps = 11/288 (3%)

Query: 12  FLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCY----ARALFFSI 67
           F +   G    S   Q +  +   GF  D+S    +++ + DF   C     ARA+F  +
Sbjct: 228 FFNACAGMTNLSLGEQFYGFVAKCGFGKDVS----VSNSVVDFYGKCRCVGKARAVFDGM 283

Query: 68  PKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIG 127
              +   +  ++  ++ N   + +   Y   R+     P +F  S VL+  +      +G
Sbjct: 284 GVRNNVSWCSMVVAYAQNGAEEEAFFVYLGARR-AGEEPTDFMVSSVLTTCAGLLGLDLG 342

Query: 128 VLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKN 187
             LH  A+ S   S++FV +ALVD+Y K   ++ A +VF +MP+++ V WN+MI G    
Sbjct: 343 RALHAVAVRSCIDSNIFVASALVDMYGKCGGIEDAEQVFFEMPQRNLVTWNAMIGGYAHI 402

Query: 188 CCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEI-QCLGLKLGFHDHVY 246
               +++ VF  M+    T  +  ++  VL A +     + G E+ Q +  + G    + 
Sbjct: 403 GDAHNALSVFDKMIMGQETAPNYITLVNVLTACSRGGLTKEGYELFQTMKWRFGIEPRIE 462

Query: 247 VLTGLVSFYSKCGEVERAELLFRDI-VRPDLISCNAMISGYTCNGKTE 293
               +V    + G  ERA  + + + +RP +    A++ G   +GKTE
Sbjct: 463 HYACVVDLLCRAGMEERAYKIIQGMPMRPSISVWGALLGGCKMHGKTE 510


>gi|125597850|gb|EAZ37630.1| hypothetical protein OsJ_21964 [Oryza sativa Japonica Group]
          Length = 583

 Score =  417 bits (1072), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 209/570 (36%), Positives = 342/570 (60%), Gaps = 1/570 (0%)

Query: 215 AVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRP 274
           A + A  E + L  G ++    +   +   V++ T LV+ Y +CG ++ A  +   +   
Sbjct: 15  AAITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMPER 74

Query: 275 DLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIH 334
            ++S   MISGY+   +   +L LF ++L +    N  T+  ++        ++    +H
Sbjct: 75  SVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQVH 134

Query: 335 SFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTE 394
           S  +K+   S+  V ++L  +Y++   ++ AR++FD   E+ + S  A+I+GY Q GL E
Sbjct: 135 SLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGLDE 194

Query: 395 EAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALI 454
           EA+ LF+++ +  +  N VT +++++A + L ++  GK VH L+  +     + +  +LI
Sbjct: 195 EALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFFVALQNSLI 254

Query: 455 DMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGV 514
           DMY+KCG ++ +R +FD M  +S V+WN M+ GYG HG G E + LF + LH  ++P  V
Sbjct: 255 DMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLFKD-LHKEVKPDSV 313

Query: 515 TFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKG 574
           T L+VL  CSH GLV EG +IF +++ +        HY C++D+LGR+G+LEKAL  I+ 
Sbjct: 314 TLLAVLSGCSHGGLVDEGLDIFDTVVKEQSALLHTGHYGCIIDLLGRSGRLEKALNLIEN 373

Query: 575 LAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQA 634
           +  E  P++WG+LLGAC +H + ++  + ++KL E++PEN G +V+LSNIY+A   +   
Sbjct: 374 MPFESTPSIWGSLLGACRVHANVHVGELVAQKLLEMEPENAGNYVILSNIYAAAGMWKDV 433

Query: 635 ATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQ 694
             VR+++ ++ + K PG + I +    H F S ++ HP    I A ++++   ++ AGF 
Sbjct: 434 FKVRKLMLEKTVTKEPGQSWIILDKVIHTFHSSERFHPSKKDINAKIKEIFVDIKAAGFV 493

Query: 695 TETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFI 754
            +    LHDV++E+KE M+  HSEKLAI FGL+ T PG  IR++KNLR+C+DCH   KF+
Sbjct: 494 PDLSCVLHDVDDEQKERMLLGHSEKLAITFGLMNTPPGLTIRVMKNLRICVDCHNFAKFV 553

Query: 755 SKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           SKV  R I +RD NRFH    G C+CGDYW
Sbjct: 554 SKVYEREISLRDKNRFHLLTHGNCTCGDYW 583



 Score =  179 bits (455), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 109/383 (28%), Positives = 201/383 (52%), Gaps = 7/383 (1%)

Query: 116 SAASACCDRSI---GVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEK 172
           +A +AC +R     G  +H   I + Y   +F+G  LV +Y +   +  AR V D+MPE+
Sbjct: 15  AAITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMPER 74

Query: 173 DTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEI 232
             V W +MISG  +     +++ +F  M+R  G   +  ++A VL + +  Q +  G ++
Sbjct: 75  SVVSWTTMISGYSQTERHVEALDLFIKMLR-AGCIPNEYTLATVLTSCSGPQSIYQGKQV 133

Query: 233 QCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKT 292
             L +K  F  H++V + L+  Y+K   ++ A  +F  +   D++SC A+ISGY   G  
Sbjct: 134 HSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGLD 193

Query: 293 ESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTAL 352
           E +L LFRQL +   + N  T   L+        L     +H+  L+  +    ++  +L
Sbjct: 194 EEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFFVALQNSL 253

Query: 353 STVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNP 412
             +YS+  ++  +R++FD   E+S+ SWNAM+ GY ++GL  E ISLF+++   +V P+ 
Sbjct: 254 IDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLFKDLH-KEVKPDS 312

Query: 413 VTVSSILSACAQLGAISLGKWVHE-LVKSRNFESNIYVSTALIDMYAKCGNIVEARELFD 471
           VT+ ++LS C+  G +  G  + + +VK ++   +      +ID+  + G + +A  L +
Sbjct: 313 VTLLAVLSGCSHGGLVDEGLDIFDTVVKEQSALLHTGHYGCIIDLLGRSGRLEKALNLIE 372

Query: 472 LMSHKSEVT-WNTMISGYGLHGH 493
            M  +S  + W +++    +H +
Sbjct: 373 NMPFESTPSIWGSLLGACRVHAN 395



 Score =  102 bits (255), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 99/452 (21%), Positives = 203/452 (44%), Gaps = 39/452 (8%)

Query: 27  QTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNE 86
           Q HA++I   ++  +   T+L        A   AR +   +P+  +  +  +I G+S  E
Sbjct: 31  QVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMPERSVVSWTTMISGYSQTE 90

Query: 87  MPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVG 146
               ++  +  + +   + P+ +T + VL++ S       G  +H   + + + S +FVG
Sbjct: 91  RHVEALDLFIKMLRAGCI-PNEYTLATVLTSCSGPQSIYQGKQVHSLLVKTNFESHMFVG 149

Query: 147 AALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGT 206
           ++L+D+Y K   ++ AR+VFD +PE+D V   ++ISG  +    ++++ +F  +    G 
Sbjct: 150 SSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGLDEEALDLFRQLYSE-GM 208

Query: 207 WLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAEL 266
             +  +   ++ A++ +  L  G ++  L L+      V +   L+  YSKCG++  +  
Sbjct: 209 QCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFFVALQNSLIDMYSKCGKLLYSRR 268

Query: 267 LFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGH 326
           +F +++   ++S NAM+ GY  +G     + LF+ L     + +S T++ +         
Sbjct: 269 VFDNMLERSVVSWNAMLMGYGRHGLGHEVISLFKDLHKEV-KPDSVTLLAV--------- 318

Query: 327 LHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAG 386
             L+ C H   +  G       L    TV              ++S+      +  +I  
Sbjct: 319 --LSGCSHGGLVDEG-------LDIFDTVVK------------EQSALLHTGHYGCIIDL 357

Query: 387 YTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWV-HELVKSRNFES 445
             ++G  E+A++L + M        P    S+L AC     + +G+ V  +L++     +
Sbjct: 358 LGRSGRLEKALNLIENM---PFESTPSIWGSLLGACRVHANVHVGELVAQKLLEMEPENA 414

Query: 446 NIYVSTALIDMYAKCGNIVEARELFDLMSHKS 477
             YV   L ++YA  G   +  ++  LM  K+
Sbjct: 415 GNYV--ILSNIYAAAGMWKDVFKVRKLMLEKT 444


>gi|125577630|gb|EAZ18852.1| hypothetical protein OsJ_34389 [Oryza sativa Japonica Group]
          Length = 587

 Score =  417 bits (1072), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 226/587 (38%), Positives = 340/587 (57%), Gaps = 2/587 (0%)

Query: 200 MVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHD-HVYVLTGLVSFYSKC 258
           M+R G    D T  +A   A +      +G +I  L ++ G+     +V    +  Y K 
Sbjct: 1   MLRLGLRPNDFTFPSAFKAAASAPPRSTIGPQIHSLAIRFGYLPVDPFVSCAALDMYFKT 60

Query: 259 GEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLI 318
           G ++ A  LF ++   ++++ NA+++    +G+   ++  +  L  +    N  +     
Sbjct: 61  GRLKLARHLFGEMPNRNVVAWNAVMTNAVLDGRPLETIEAYFGLREAGGLPNVVSACAFF 120

Query: 319 PVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLA 378
                  +L L    H F +K G   + SVL ++   Y +      AR +FD    ++  
Sbjct: 121 NACAGAMYLSLGEQFHGFVVKCGFEMDVSVLNSMVDFYGKCRCAGKARAVFDGMGVRNSV 180

Query: 379 SWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELV 438
           SW +M+A Y QNG  EEA + +   + S   P    VSS L+ CA L  + LG+ +H + 
Sbjct: 181 SWCSMVAAYAQNGAEEEAFAAYLGARRSGEEPTDFMVSSALTTCAGLLGLHLGRALHAVA 240

Query: 439 KSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEAL 498
                ++NI+V++AL+DMY KCG + +A ++F     ++ VTWN MI GY   G    AL
Sbjct: 241 VRSCIDANIFVASALVDMYGKCGCVEDAEQIFYETPQRNLVTWNAMIGGYAHIGDAQNAL 300

Query: 499 QLFSEMLHSG-IRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVD 557
            +F +M+ SG   P+ +T ++V+ +CS  GL ++G E+F++M    G +P  EHYAC+VD
Sbjct: 301 LVFDDMIRSGETAPNYITLVNVITSCSRGGLTKDGYELFETMRERFGIEPRTEHYACVVD 360

Query: 558 ILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGY 617
           +LGRAG  E+A E I+G+ + P  +VWGALLGAC +H  T L R+A+EKLFELDP++ G 
Sbjct: 361 LLGRAGMEEQAYEVIQGMPMRPSISVWGALLGACKMHGKTELGRIAAEKLFELDPQDSGN 420

Query: 618 HVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAI 677
           HVLLSN++++   + +A  +R+ +K   + K PGC+ +      HVF + D  H     I
Sbjct: 421 HVLLSNMFASAGRWAEATDIRKEMKNVGIKKDPGCSWVTWKNVVHVFRAKDTKHEMYNEI 480

Query: 678 YAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRI 737
            A+L KL  +M+ AG+  +T  +L+D+EEEEKE  +  HSEKLA+AFGLI   PG  IRI
Sbjct: 481 QALLSKLRKQMQAAGYMPDTQYSLYDLEEEEKESEVFQHSEKLALAFGLICIPPGVPIRI 540

Query: 738 IKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           +KNLR+C+DCH A KFIS + GR I+VRD NRFHHFK   CSCGDYW
Sbjct: 541 MKNLRICVDCHRAFKFISGIVGREIIVRDNNRFHHFKQYQCSCGDYW 587



 Score =  162 bits (409), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 108/395 (27%), Positives = 194/395 (49%), Gaps = 6/395 (1%)

Query: 103 ALTPDNFTYSFVLSAASACCDRS-IGVLLHGHAIVSGY-GSDLFVGAALVDLYFKFSWVK 160
            L P++FT+     AA++   RS IG  +H  AI  GY   D FV  A +D+YFK   +K
Sbjct: 5   GLRPNDFTFPSAFKAAASAPPRSTIGPQIHSLAIRFGYLPVDPFVSCAALDMYFKTGRLK 64

Query: 161 SARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAV 220
            AR +F +MP ++ V WN++++  + +    ++I  +  + R  G   +  S  A   A 
Sbjct: 65  LARHLFGEMPNRNVVAWNAVMTNAVLDGRPLETIEAYFGL-REAGGLPNVVSACAFFNAC 123

Query: 221 AEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCN 280
           A    L LG +     +K GF   V VL  +V FY KC    +A  +F  +   + +S  
Sbjct: 124 AGAMYLSLGEQFHGFVVKCGFEMDVSVLNSMVDFYGKCRCAGKARAVFDGMGVRNSVSWC 183

Query: 281 AMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKS 340
           +M++ Y  NG  E +   +     S E      +   +        LHL   +H+  ++S
Sbjct: 184 SMVAAYAQNGAEEEAFAAYLGARRSGEEPTDFMVSSALTTCAGLLGLHLGRALHAVAVRS 243

Query: 341 GIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLF 400
            I +N  V +AL  +Y +   +E A ++F E+ +++L +WNAMI GY   G  + A+ +F
Sbjct: 244 CIDANIFVASALVDMYGKCGCVEDAEQIFYETPQRNLVTWNAMIGGYAHIGDAQNALLVF 303

Query: 401 QEM-QASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSR-NFESNIYVSTALIDMYA 458
            +M ++ + APN +T+ +++++C++ G    G  + E ++ R   E        ++D+  
Sbjct: 304 DDMIRSGETAPNYITLVNVITSCSRGGLTKDGYELFETMRERFGIEPRTEHYACVVDLLG 363

Query: 459 KCGNIVEARELFDLMSHKSEVT-WNTMISGYGLHG 492
           + G   +A E+   M  +  ++ W  ++    +HG
Sbjct: 364 RAGMEEQAYEVIQGMPMRPSISVWGALLGACKMHG 398



 Score = 90.5 bits (223), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 67/284 (23%), Positives = 132/284 (46%), Gaps = 3/284 (1%)

Query: 12  FLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPD 71
           F +   GA   S   Q H  ++  GF+ D+S +  +       +    ARA+F  +   +
Sbjct: 119 FFNACAGAMYLSLGEQFHGFVVKCGFEMDVSVLNSMVDFYGKCRCAGKARAVFDGMGVRN 178

Query: 72  LFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLH 131
              +  ++  ++ N   + +   Y   R+ +   P +F  S  L+  +      +G  LH
Sbjct: 179 SVSWCSMVAAYAQNGAEEEAFAAYLGARR-SGEEPTDFMVSSALTTCAGLLGLHLGRALH 237

Query: 132 GHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQ 191
             A+ S   +++FV +ALVD+Y K   V+ A ++F + P+++ V WN+MI G       Q
Sbjct: 238 AVAVRSCIDANIFVASALVDMYGKCGCVEDAEQIFYETPQRNLVTWNAMIGGYAHIGDAQ 297

Query: 192 DSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEI-QCLGLKLGFHDHVYVLTG 250
           +++ VF DM+R+G T  +  ++  V+ + +     + G E+ + +  + G          
Sbjct: 298 NALLVFDDMIRSGETAPNYITLVNVITSCSRGGLTKDGYELFETMRERFGIEPRTEHYAC 357

Query: 251 LVSFYSKCGEVERAELLFRDI-VRPDLISCNAMISGYTCNGKTE 293
           +V    + G  E+A  + + + +RP +    A++     +GKTE
Sbjct: 358 VVDLLGRAGMEEQAYEVIQGMPMRPSISVWGALLGACKMHGKTE 401


>gi|125529196|gb|EAY77310.1| hypothetical protein OsI_05285 [Oryza sativa Indica Group]
          Length = 785

 Score =  417 bits (1072), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 238/733 (32%), Positives = 392/733 (53%), Gaps = 17/733 (2%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           AR L   +P+ +   FN++I  +S   +   S+      R+   +  D F+Y+  L+A S
Sbjct: 62  ARRLLDEMPRRNAVSFNLLIDAYSREGLAPLSLETLARARR-AGVDVDRFSYAAALAACS 120

Query: 120 ACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNS 179
                  G  +H  AI+ G  S +FV  +LV +Y K   +  AR+VFD   E+D V WNS
Sbjct: 121 RAGHLRAGRAVHALAILDGLSSGVFVSNSLVSMYSKCGEMGEARRVFDVAEERDDVSWNS 180

Query: 180 MISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQE--LRLGMEIQCLGL 237
           ++SG ++    ++ + VF  M+R GG  L+S ++ +V+   +   +  + +   +    +
Sbjct: 181 LVSGYVRAGAREEMVRVFA-MMRRGGMGLNSFALGSVIKCCSGRGDGTMDIAEAVHGCVI 239

Query: 238 KLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGY----TCNGKTE 293
           K G    V++++ ++  Y+K G +  A  LFR +  P+++  N MI+G+    T  GK  
Sbjct: 240 KAGLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQEPNVVMFNTMIAGFCRTETVIGKEV 299

Query: 294 SS--LRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTA 351
           +S  L L+ ++ +   +    T   ++      G+L     IH   +K     +  + +A
Sbjct: 300 ASEALTLYSEVQSRGMQPTEFTFSSVLRACNLAGYLEFGKQIHGQVIKYTFQEDDFIGSA 359

Query: 352 LSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPN 411
           L  +Y     ME   + F  S +  + +W AM++G  QN L E+A+SLF E   + + P+
Sbjct: 360 LIDLYFNSGCMEDGFRCFRSSPKHDIVTWTAMVSGCVQNELHEKALSLFHESLGAGLKPD 419

Query: 412 PVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFD 471
             T+SS+++ACA L     G+ +        F+    +  + + MYA+ G++  A   F 
Sbjct: 420 LFTISSVMNACASLAVARAGEQIQCFATKSGFDRFTVMGNSCVHMYARSGDVDAATRRFQ 479

Query: 472 LMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVRE 531
            M     V+W+ +IS +  HG   +AL  F EM+ + + P+ +TFL VL ACSH GLV E
Sbjct: 480 EMESHDVVSWSAVISCHAQHGCARDALHFFDEMVDAKVVPNEITFLGVLTACSHGGLVDE 539

Query: 532 GDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGAC 591
           G   +++M  D+G  P  +H  C+VD+LGRAG+L  A  FI        P +W +LL +C
Sbjct: 540 GLRYYETMNKDYGLSPTIKHCTCVVDLLGRAGRLADAEAFISNGIFHADPVIWRSLLASC 599

Query: 592 MIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPG 651
            IH+D    ++ + ++ EL+P +   +V+L N+Y    +   A+  R ++K+R + K PG
Sbjct: 600 RIHRDLERGQLVANRIMELEPTSSASYVILYNMYLDAGELSLASKTRDLMKQRGVKKEPG 659

Query: 652 CTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKEL 711
            + IE+    H F +GD+ HP+S+AIY  LE++  ++ +    T+T     ++ + E+ L
Sbjct: 660 LSWIELKCGVHSFVAGDKSHPESSAIYTKLEEMLSRIEKLA-TTDT-----EISKREQNL 713

Query: 712 MMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFH 771
            M  HSEKLA+A G+I       IR++KNLRVC DCH+  K ISK   R I++RD  RFH
Sbjct: 714 -MNCHSEKLAVALGMIHLPQSAPIRVMKNLRVCRDCHSTMKLISKSENREIILRDPIRFH 772

Query: 772 HFKGGVCSCGDYW 784
           HF+ G CSC DYW
Sbjct: 773 HFRDGSCSCADYW 785



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 122/437 (27%), Positives = 205/437 (46%), Gaps = 10/437 (2%)

Query: 140 GSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGD 199
            + LF+   L+  Y +      AR++ D+MP ++ V +N +I    +      S+     
Sbjct: 40  AASLFLRNTLLAAYCRLGGPLPARRLLDEMPRRNAVSFNLLIDAYSREGLAPLSLETLA- 98

Query: 200 MVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCG 259
             R  G  +D  S AA L A +    LR G  +  L +  G    V+V   LVS YSKCG
Sbjct: 99  RARRAGVDVDRFSYAAALAACSRAGHLRAGRAVHALAILDGLSSGVFVSNSLVSMYSKCG 158

Query: 260 EVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIP 319
           E+  A  +F      D +S N+++SGY   G  E  +R+F  +      +NS  +  +I 
Sbjct: 159 EMGEARRVFDVAEERDDVSWNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVIK 218

Query: 320 VFYPFGH--LHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSL 377
                G   + +   +H   +K+G+ S+  +++A+  +Y++   +  A  LF    E ++
Sbjct: 219 CCSGRGDGTMDIAEAVHGCVIKAGLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQEPNV 278

Query: 378 ASWNAMIAGYTQ------NGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLG 431
             +N MIAG+ +        +  EA++L+ E+Q+  + P   T SS+L AC   G +  G
Sbjct: 279 VMFNTMIAGFCRTETVIGKEVASEALTLYSEVQSRGMQPTEFTFSSVLRACNLAGYLEFG 338

Query: 432 KWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLH 491
           K +H  V    F+ + ++ +ALID+Y   G + +    F        VTW  M+SG   +
Sbjct: 339 KQIHGQVIKYTFQEDDFIGSALIDLYFNSGCMEDGFRCFRSSPKHDIVTWTAMVSGCVQN 398

Query: 492 GHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEH 551
               +AL LF E L +G++P   T  SV+ AC+   + R G++I Q      GF      
Sbjct: 399 ELHEKALSLFHESLGAGLKPDLFTISSVMNACASLAVARAGEQI-QCFATKSGFDRFTVM 457

Query: 552 YACMVDILGRAGQLEKA 568
               V +  R+G ++ A
Sbjct: 458 GNSCVHMYARSGDVDAA 474



 Score =  142 bits (358), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 96/356 (26%), Positives = 179/356 (50%), Gaps = 10/356 (2%)

Query: 245 VYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLA 304
           +++   L++ Y + G    A  L  ++ R + +S N +I  Y+  G    SL    +   
Sbjct: 43  LFLRNTLLAAYCRLGGPLPARRLLDEMPRRNAVSFNLLIDAYSREGLAPLSLETLARARR 102

Query: 305 SAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEA 364
           +   V+  +    +      GHL     +H+  +  G+ S   V  +L ++YS+  EM  
Sbjct: 103 AGVDVDRFSYAAALAACSRAGHLRAGRAVHALAILDGLSSGVFVSNSLVSMYSKCGEMGE 162

Query: 365 ARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQ 424
           AR++FD + E+   SWN++++GY + G  EE + +F  M+   +  N   + S++  C+ 
Sbjct: 163 ARRVFDVAEERDDVSWNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVIKCCSG 222

Query: 425 L--GAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWN 482
              G + + + VH  V     +S++++ +A+IDMYAK G +VEA  LF  +   + V +N
Sbjct: 223 RGDGTMDIAEAVHGCVIKAGLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQEPNVVMFN 282

Query: 483 TMISGY----GLHGHGL--EALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIF 536
           TMI+G+     + G  +  EAL L+SE+   G++P+  TF SVL AC+ AG +  G +I 
Sbjct: 283 TMIAGFCRTETVIGKEVASEALTLYSEVQSRGMQPTEFTFSSVLRACNLAGYLEFGKQIH 342

Query: 537 QSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACM 592
             +I  + F+      + ++D+   +G +E      +  + +     W A++  C+
Sbjct: 343 GQVIK-YTFQEDDFIGSALIDLYFNSGCMEDGFRCFRS-SPKHDIVTWTAMVSGCV 396



 Score =  129 bits (324), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 86/332 (25%), Positives = 158/332 (47%), Gaps = 19/332 (5%)

Query: 17  KGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFN 76
           +G  T       H  +I  G  +D+  V+ +    +   A   A ALF S+ +P++ +FN
Sbjct: 223 RGDGTMDIAEAVHGCVIKAGLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQEPNVVMFN 282

Query: 77  VIIRGFSN------NEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLL 130
            +I GF         E+   ++  Y+ + ++  + P  FT+S VL A +       G  +
Sbjct: 283 TMIAGFCRTETVIGKEVASEALTLYSEV-QSRGMQPTEFTFSSVLRACNLAGYLEFGKQI 341

Query: 131 HGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCF 190
           HG  I   +  D F+G+AL+DLYF    ++   + F   P+ D V W +M+SG ++N   
Sbjct: 342 HGQVIKYTFQEDDFIGSALIDLYFNSGCMEDGFRCFRSSPKHDIVTWTAMVSGCVQNELH 401

Query: 191 QDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTG 250
           + ++ +F + +   G   D  ++++V+ A A +   R G +IQC   K GF     +   
Sbjct: 402 EKALSLFHESL-GAGLKPDLFTISSVMNACASLAVARAGEQIQCFATKSGFDRFTVMGNS 460

Query: 251 LVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVN 310
            V  Y++ G+V+ A   F+++   D++S +A+IS +  +G    +L  F +++ +    N
Sbjct: 461 CVHMYARSGDVDAATRRFQEMESHDVVSWSAVISCHAQHGCARDALHFFDEMVDAKVVPN 520

Query: 311 SSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGI 342
             T +G+           LT C H   +  G+
Sbjct: 521 EITFLGV-----------LTACSHGGLVDEGL 541



 Score =  103 bits (256), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 71/261 (27%), Positives = 128/261 (49%), Gaps = 10/261 (3%)

Query: 352 LSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPN 411
           L   Y RL     AR+L DE   ++  S+N +I  Y++ GL   ++      + + V  +
Sbjct: 49  LLAAYCRLGGPLPARRLLDEMPRRNAVSFNLLIDAYSREGLAPLSLETLARARRAGVDVD 108

Query: 412 PVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFD 471
             + ++ L+AC++ G +  G+ VH L       S ++VS +L+ MY+KCG + EAR +FD
Sbjct: 109 RFSYAAALAACSRAGHLRAGRAVHALAILDGLSSGVFVSNSLVSMYSKCGEMGEARRVFD 168

Query: 472 LMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVRE 531
           +   + +V+WN+++SGY   G   E +++F+ M   G+  +     SV+  CS  G   +
Sbjct: 169 VAEERDDVSWNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVIKCCSGRG---D 225

Query: 532 GDEIFQSMIH----DHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGAL 587
           G       +H      G        + M+D+  + G L +A    + +  EP   ++  +
Sbjct: 226 GTMDIAEAVHGCVIKAGLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQ-EPNVVMFNTM 284

Query: 588 LGACMIHKDTNLAR-VASEKL 607
           + A     +T + + VASE L
Sbjct: 285 I-AGFCRTETVIGKEVASEAL 304


>gi|449513257|ref|XP_004164277.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g48910-like [Cucumis sativus]
          Length = 558

 Score =  417 bits (1072), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 213/527 (40%), Positives = 314/527 (59%), Gaps = 15/527 (2%)

Query: 264 AELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYP 323
           A  +F  I  PD I+ N +I  ++         R F     S      S  + L    +P
Sbjct: 41  ARYVFSRIPSPDTIAYNTIIRSHS---------RFFPSHSLSYFFSMRSNGIPLDNFTFP 91

Query: 324 F-----GHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLA 378
           F       L +   +HS  +K G+ S+  V  AL  VY     +E A K+FDE SE+   
Sbjct: 92  FVLKACSRLQINLHLHSLIVKYGLGSDIFVQNALICVYGYCGSLEMAVKVFDEMSERDSV 151

Query: 379 SWNAMIAGYTQNGLTEEAISLFQEMQ-ASKVAPNPVTVSSILSACAQLGAISLGKWVHEL 437
           SW+ +IA +  NG   EA+ LF++MQ   KV P+ VT+ S++SA + LG + LG+WV   
Sbjct: 152 SWSTVIASFLNNGYASEALDLFEKMQLEDKVVPDEVTMLSVISAISHLGDLELGRWVRAF 211

Query: 438 VKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEA 497
           +    F  ++ + TALIDM+++CG+I E+  +F+ M+ ++ +TW  +I+G G+HG  +EA
Sbjct: 212 IGRLGFGVSVALGTALIDMFSRCGSIDESIVVFEKMAVRNVLTWTALINGLGIHGRSMEA 271

Query: 498 LQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVD 557
           L +F  M  SG++P  VTF  VL ACSH GLV+EG +IF+S+   +G  PL +HY CMVD
Sbjct: 272 LAMFHSMRKSGVQPDYVTFSGVLVACSHGGLVKEGWDIFESIRKVYGMDPLLDHYGCMVD 331

Query: 558 ILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGY 617
           ILGRAG L +A +F++ + ++P   +W  LLGAC+ H +  LA     K+ ++     G 
Sbjct: 332 ILGRAGLLNEAYDFVERMPMKPNSIIWRTLLGACVNHNNLGLAEKVKAKISKISSSQNGD 391

Query: 618 HVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAI 677
            VLLSN+Y A   +++ A++R  ++++++ K PGC+ I V  T H F SGD  HPQS  I
Sbjct: 392 LVLLSNVYGAAGRWVEKASIRSKMREKRIGKEPGCSSINVDQTIHEFVSGDNSHPQSEDI 451

Query: 678 YAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRI 737
              L  + G +R  G+  +T   LHD+EEEE+E  +  HSEKLA+AF +++ +    IRI
Sbjct: 452 TKFLSSIIGDLRNRGYMMQTKNVLHDIEEEEREHSLSYHSEKLAVAFAILSMKDKRTIRI 511

Query: 738 IKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           +KNLR+C DCH+  K IS    R I++RD NRFHHF+ G+CSC DYW
Sbjct: 512 MKNLRICYDCHSFMKHISVRFERKIIIRDRNRFHHFEKGLCSCHDYW 558



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 119/462 (25%), Positives = 207/462 (44%), Gaps = 53/462 (11%)

Query: 23  SQLTQTHAQIIIHGFQND--------LSTVTKLAHRLSDFKATCYARALFFSIPKPDLFL 74
           + + + H  II    QND        LS V      LS      YAR +F  IP PD   
Sbjct: 2   NNVYRLHCYIIKSSKQNDPLSLRTLLLSCVAAAPESLS------YARYVFSRIPSPDTIA 55

Query: 75  FNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHA 134
           +N IIR  S    P  S+ ++  +R N  +  DNFT+ FVL A   C    I + LH   
Sbjct: 56  YNTIIRSHSRF-FPSHSLSYFFSMRSN-GIPLDNFTFPFVLKA---CSRLQINLHLHSLI 110

Query: 135 IVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSI 194
           +  G GSD+FV  AL+ +Y     ++ A KVFD+M E+D+V W+++I+  + N    +++
Sbjct: 111 VKYGLGSDIFVQNALICVYGYCGSLEMAVKVFDEMSERDSVSWSTVIASFLNNGYASEAL 170

Query: 195 WVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSF 254
            +F  M        D  ++ +V+ A++ + +L LG  ++    +LGF   V + T L+  
Sbjct: 171 DLFEKMQLEDKVVPDEVTMLSVISAISHLGDLELGRWVRAFIGRLGFGVSVALGTALIDM 230

Query: 255 YSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTI 314
           +S+CG ++ + ++F  +   ++++  A+I+G   +G++  +L +F  +  S         
Sbjct: 231 FSRCGSIDESIVVFEKMAVRNVLTWTALINGLGIHGRSMEALAMFHSMRKS--------- 281

Query: 315 VGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSE 374
            G+ P +  F  + L  C H   +K G                  +  E+ RK++    +
Sbjct: 282 -GVQPDYVTFSGV-LVACSHGGLVKEG-----------------WDIFESIRKVY--GMD 320

Query: 375 KSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWV 434
             L  +  M+    + GL  EA    + M    + PN +   ++L AC     + L + V
Sbjct: 321 PLLDHYGCMVDILGRAGLLNEAYDFVERM---PMKPNSIIWRTLLGACVNHNNLGLAEKV 377

Query: 435 HELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHK 476
              +   +   N  +   L ++Y   G  VE   +   M  K
Sbjct: 378 KAKISKISSSQNGDL-VLLSNVYGAAGRWVEKASIRSKMREK 418


>gi|357438977|ref|XP_003589765.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355478813|gb|AES60016.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 960

 Score =  417 bits (1072), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 253/806 (31%), Positives = 412/806 (51%), Gaps = 92/806 (11%)

Query: 50  RLSDFKATCYARALFFSIPK--PDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNT---AL 104
           R+SD      A  LF  +P    D   +  +I G+S N     S   ++ + ++T     
Sbjct: 89  RMSD------AEKLFDEMPVRVKDSVSWTTMISGYSQNGFHSRSFETFSLMIRDTNDGGK 142

Query: 105 TPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFK--------- 155
             D F+++ V+ A  +  D  + + LH      G+G +  +  ++V +Y K         
Sbjct: 143 NYDPFSFTSVMKACGSLGDSRLAIQLHALVSKLGFGMETCIQNSVVGMYVKCGDVDLAET 202

Query: 156 ----------FSWVK------------SARKVFDKMPEKDTVLWNSMISGLMKNCCFQDS 193
                     F W               A ++F++MPE+D V WN++IS   ++      
Sbjct: 203 VFFDIERPSLFCWNSMIYGYSQMYGPYKALQIFNRMPERDEVSWNTLISIFSQHGFGVQC 262

Query: 194 IWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVS 253
           + +F +M  N G   +  +  +VL A A   +L+ G  +    L++     +    GL+ 
Sbjct: 263 LAMFVEMC-NQGFSPNFMTYGSVLSACASTSDLKWGAHLHARILRMEHSLDLVFGNGLID 321

Query: 254 FYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNS-- 311
            Y+KCG ++ A+ +F+ +   D IS N++I+G    G  E +L LF Q+  S+  ++   
Sbjct: 322 MYAKCGCLDLAKRVFKSLREHDHISWNSLITGVVHFGLGEDALILFNQMRRSSVVLDEFI 381

Query: 312 -STIVGLI--PVFYPFGHLHLTNCIHSFCLKSGIVSNSSV-------------------- 348
             TI+G+   P +   G L     +H + +KSG+ S++ V                    
Sbjct: 382 LPTILGVCSGPDYASTGEL-----LHGYTIKSGMGSSAPVGNAIITMYAKCGDTDKADLV 436

Query: 349 -----------LTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAI 397
                       TA+ T +SR  ++  AR  FD   E+++ +WN+M++ Y QNG +EE +
Sbjct: 437 FRLMPLRNTISWTAMITAFSRSGDIGKARGYFDMMPERNIVTWNSMLSTYVQNGFSEEGL 496

Query: 398 SLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMY 457
            L+  M+++ V P+ +T ++ + ACA L  + LG  V           N+ V+ +++ MY
Sbjct: 497 KLYVSMRSNGVQPDWITFTTSIRACADLAIVKLGMQVVTHATKFGLSLNVSVANSIVTMY 556

Query: 458 AKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFL 517
           ++CG I EA+  FD +  K  ++WN M++ +  +G G++ +  F +ML +  +P+ ++++
Sbjct: 557 SRCGLIKEAKNTFDSIDDKDLISWNAMLAAFAQNGLGIKVIDTFEDMLKTECKPNHISYV 616

Query: 518 SVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAV 577
           SVL  CSH GLV EG   F SM    G  P  EH++CMVD+LGRAG LE+A + I+G+  
Sbjct: 617 SVLSGCSHMGLVAEGKHYFDSMTRVFGISPTNEHFSCMVDLLGRAGLLEQAKDLIEGMPF 676

Query: 578 EPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATV 637
           +P   VW ALLG+C +H D  LA  A++KL ELD E    +VLLSN+YS   +    A +
Sbjct: 677 KPNATVWSALLGSCRVHHDLRLAETAAKKLMELDVEGSEGYVLLSNMYSESGELDNVADM 736

Query: 638 RQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTET 697
           R+++K + +  + GC+ IEV    HVFT  +  HPQ   +Y  LE++   + + G     
Sbjct: 737 RKLMKVKGIRTSRGCSWIEVDNRVHVFTVDETSHPQIKEVYLKLEEMMKMIEDTGKYITV 796

Query: 698 VTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKV 757
            +++H  +        K HSEKLA AFGL+       I ++KNLRVC DCH   K +S V
Sbjct: 797 ESSVHRSK--------KYHSEKLAFAFGLLNLPSWMPIHVMKNLRVCDDCHLVIKLLSLV 848

Query: 758 TGRVIVVRDANRFHHFKGGVCSCGDY 783
           T R +++RD  RFHHFK G+CSC DY
Sbjct: 849 TSRELIMRDGYRFHHFKDGICSCKDY 874



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 128/463 (27%), Positives = 214/463 (46%), Gaps = 71/463 (15%)

Query: 142 DLFVGAALVDLYFKFSWVKSARKVFDKMPE--KDTVLWNSMISGLMKNCCFQDSIWVFGD 199
           ++F    ++      S +  A K+FD+MP   KD+V W +MISG  +N     S   F  
Sbjct: 73  NIFTWNTMIRALVSSSRMSDAEKLFDEMPVRVKDSVSWTTMISGYSQNGFHSRSFETFSL 132

Query: 200 MVRN---GGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYS 256
           M+R+   GG   D  S  +V+ A   + + RL +++  L  KLGF     +   +V  Y 
Sbjct: 133 MIRDTNDGGKNYDPFSFTSVMKACGSLGDSRLAIQLHALVSKLGFGMETCIQNSVVGMYV 192

Query: 257 KCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIV- 315
           KCG+V+ AE +F DI RP L   N+MI GY+       +L++F ++    + V+ +T++ 
Sbjct: 193 KCGDVDLAETVFFDIERPSLFCWNSMIYGYSQMYGPYKALQIFNRM-PERDEVSWNTLIS 251

Query: 316 ---------------------GLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVL----- 349
                                G  P F  +G + L+ C  +  LK G   ++ +L     
Sbjct: 252 IFSQHGFGVQCLAMFVEMCNQGFSPNFMTYGSV-LSACASTSDLKWGAHLHARILRMEHS 310

Query: 350 ------TALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEM 403
                   L  +Y++   ++ A+++F    E    SWN++I G    GL E+A+ LF +M
Sbjct: 311 LDLVFGNGLIDMYAKCGCLDLAKRVFKSLREHDHISWNSLITGVVHFGLGEDALILFNQM 370

Query: 404 QASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKC--- 460
           + S V  +   + +IL  C+     S G+ +H         S+  V  A+I MYAKC   
Sbjct: 371 RRSSVVLDEFILPTILGVCSGPDYASTGELLHGYTIKSGMGSSAPVGNAIITMYAKCGDT 430

Query: 461 ----------------------------GNIVEARELFDLMSHKSEVTWNTMISGYGLHG 492
                                       G+I +AR  FD+M  ++ VTWN+M+S Y  +G
Sbjct: 431 DKADLVFRLMPLRNTISWTAMITAFSRSGDIGKARGYFDMMPERNIVTWNSMLSTYVQNG 490

Query: 493 HGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEI 535
              E L+L+  M  +G++P  +TF + + AC+   +V+ G ++
Sbjct: 491 FSEEGLKLYVSMRSNGVQPDWITFTTSIRACADLAIVKLGMQV 533



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 74/330 (22%), Positives = 137/330 (41%), Gaps = 72/330 (21%)

Query: 328 HLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWN------ 381
           H+   +H+  + SG+ S+  +L  L  +YS       A ++F E+  +++ +WN      
Sbjct: 25  HIARKLHAQLILSGLDSSLFLLNNLLHMYSNCGLTHDAFQVFQETHHRNIFTWNTMIRAL 84

Query: 382 ---------------------------AMIAGYTQNGLTEEAISLF----QEMQASKVAP 410
                                       MI+GY+QNG    +   F    ++        
Sbjct: 85  VSSSRMSDAEKLFDEMPVRVKDSVSWTTMISGYSQNGFHSRSFETFSLMIRDTNDGGKNY 144

Query: 411 NPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNI------- 463
           +P + +S++ AC  LG   L   +H LV    F     +  +++ MY KCG++       
Sbjct: 145 DPFSFTSVMKACGSLGDSRLAIQLHALVSKLGFGMETCIQNSVVGMYVKCGDVDLAETVF 204

Query: 464 ------------------------VEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQ 499
                                    +A ++F+ M  + EV+WNT+IS +  HG G++ L 
Sbjct: 205 FDIERPSLFCWNSMIYGYSQMYGPYKALQIFNRMPERDEVSWNTLISIFSQHGFGVQCLA 264

Query: 500 LFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIH-DHGFKPLAEHYACMVDI 558
           +F EM + G  P+ +T+ SVL AC+    ++ G  +   ++  +H    +  +   ++D+
Sbjct: 265 MFVEMCNQGFSPNFMTYGSVLSACASTSDLKWGAHLHARILRMEHSLDLVFGN--GLIDM 322

Query: 559 LGRAGQLEKALEFIKGLAVEPGPAVWGALL 588
             + G L+ A    K L  E     W +L+
Sbjct: 323 YAKCGCLDLAKRVFKSLR-EHDHISWNSLI 351


>gi|242041565|ref|XP_002468177.1| hypothetical protein SORBIDRAFT_01g041070 [Sorghum bicolor]
 gi|241922031|gb|EER95175.1| hypothetical protein SORBIDRAFT_01g041070 [Sorghum bicolor]
          Length = 640

 Score =  417 bits (1072), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 219/579 (37%), Positives = 340/579 (58%), Gaps = 3/579 (0%)

Query: 209 DSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLF 268
           +  + A +L +    + +R G ++    L  G      + T LV  Y+ CG V  A  LF
Sbjct: 62  NHNNYATILRSCVLSRAVRPGRQLHARLLVSGLGLDAVLATRLVDLYASCGLVSVARRLF 121

Query: 269 RDIV-RPDLISCNAMISGYTCNGKTESSLRLFRQLLASAE-RVNSSTIVGLIPVFYPFGH 326
            ++  + ++   N +I  Y  +G  E+++ L+R++LA      ++ T   ++        
Sbjct: 122 DEMPNQGNVFLWNVLIRAYARDGPREAAIELYREMLACGSMEPDNFTYPPVLKACAALLD 181

Query: 327 LHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAG 386
           L     +H   +++   ++  V   L  +Y++   ++ A  +FD ++ +    WN+MIA 
Sbjct: 182 LGAGREVHDRVMRTSWAADVFVCAGLIDMYAKCGCVDEAWAVFDSTTVRDAVVWNSMIAA 241

Query: 387 YTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESN 446
             QNG   EA++L + M A  +AP  VT+ S +SA A  GA+  G+ +H     R F S 
Sbjct: 242 CGQNGRPAEALALCRNMAAEGIAPTIVTLVSAISAAADAGALPRGRELHGYGWRRGFGSQ 301

Query: 447 IYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLH 506
             + T+L+DMYAK G +  AR LFD + H+  ++WN MI G+G+HGH   A +LF  M +
Sbjct: 302 DKLKTSLLDMYAKSGWVTVARVLFDQLFHRELISWNAMICGFGMHGHADHACELFRRMRN 361

Query: 507 SG-IRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQL 565
              + P  +TF+ VL AC+H G+V+E  E+F  M+  +  KP+ +HY C+VD+LG +G+ 
Sbjct: 362 EAQVMPDHITFVGVLSACNHGGMVQEAKEVFDLMVTVYSIKPMVQHYTCLVDVLGHSGRF 421

Query: 566 EKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIY 625
           ++A + IKG+ V+P   +WGALL  C IHK+  LA +A  KL EL+PE+ G +VLLSNIY
Sbjct: 422 KEASDVIKGMLVKPDSGIWGALLNGCKIHKNVELAELALHKLIELEPEDAGNYVLLSNIY 481

Query: 626 SAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLN 685
           +    + +AA VR+++  R L K   C+ IE+ G  H F  GD  HP+S  IY  LE+L 
Sbjct: 482 AQSGKWEEAARVRKLMTNRGLKKIIACSWIELKGKSHGFLVGDASHPRSDEIYEELERLE 541

Query: 686 GKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCL 745
           G + + G+  +T +  H+VE++EK  M++ HSE+LAIAFGLI+T PGT++ + KNLRVC 
Sbjct: 542 GLISQTGYVPDTTSVFHNVEDDEKRNMVRGHSERLAIAFGLISTPPGTKLLVTKNLRVCE 601

Query: 746 DCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           DCH   K IS++  R I++RD NR+HHF  G CSC D+W
Sbjct: 602 DCHVVIKLISQIEQREIIIRDVNRYHHFVNGECSCKDHW 640



 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 122/429 (28%), Positives = 202/429 (47%), Gaps = 24/429 (5%)

Query: 87  MPKSSICFYTHLR--------------KNTA-LTPDNFTYS---FVLSAASACCDRSI-- 126
           +P SS+   +HLR              +N A L+P  + Y+   +     S    R++  
Sbjct: 22  LPVSSLQTNSHLRPAPNAASPPPSPPVQNPAFLSPCPYPYNHNNYATILRSCVLSRAVRP 81

Query: 127 GVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTV-LWNSMISGLM 185
           G  LH   +VSG G D  +   LVDLY     V  AR++FD+MP +  V LWN +I    
Sbjct: 82  GRQLHARLLVSGLGLDAVLATRLVDLYASCGLVSVARRLFDEMPNQGNVFLWNVLIRAYA 141

Query: 186 KNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHV 245
           ++   + +I ++ +M+  G    D+ +   VL A A + +L  G E+    ++  +   V
Sbjct: 142 RDGPREAAIELYREMLACGSMEPDNFTYPPVLKACAALLDLGAGREVHDRVMRTSWAADV 201

Query: 246 YVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLAS 305
           +V  GL+  Y+KCG V+ A  +F      D +  N+MI+    NG+   +L L R + A 
Sbjct: 202 FVCAGLIDMYAKCGCVDEAWAVFDSTTVRDAVVWNSMIAACGQNGRPAEALALCRNMAAE 261

Query: 306 AERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAA 365
                  T+V  I      G L     +H +  + G  S   + T+L  +Y++   +  A
Sbjct: 262 GIAPTIVTLVSAISAAADAGALPRGRELHGYGWRRGFGSQDKLKTSLLDMYAKSGWVTVA 321

Query: 366 RKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQ-ASKVAPNPVTVSSILSACAQ 424
           R LFD+   + L SWNAMI G+  +G  + A  LF+ M+  ++V P+ +T   +LSAC  
Sbjct: 322 RVLFDQLFHRELISWNAMICGFGMHGHADHACELFRRMRNEAQVMPDHITFVGVLSACNH 381

Query: 425 LGAISLGKWVHEL-VKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEV-TWN 482
            G +   K V +L V   + +  +   T L+D+    G   EA ++   M  K +   W 
Sbjct: 382 GGMVQEAKEVFDLMVTVYSIKPMVQHYTCLVDVLGHSGRFKEASDVIKGMLVKPDSGIWG 441

Query: 483 TMISGYGLH 491
            +++G  +H
Sbjct: 442 ALLNGCKIH 450



 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 130/482 (26%), Positives = 228/482 (47%), Gaps = 52/482 (10%)

Query: 6   PQSRNLFLSLLKG---AKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATC---- 58
           P + N + ++L+    ++      Q HA++++ G   D      LA RL D  A+C    
Sbjct: 60  PYNHNNYATILRSCVLSRAVRPGRQLHARLLVSGLGLD----AVLATRLVDLYASCGLVS 115

Query: 59  YARALFFSIP-KPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSA 117
            AR LF  +P + ++FL+NV+IR ++ +   +++I  Y  +    ++ PDNFTY  VL A
Sbjct: 116 VARRLFDEMPNQGNVFLWNVLIRAYARDGPREAAIELYREMLACGSMEPDNFTYPPVLKA 175

Query: 118 ASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLW 177
            +A  D   G  +H   + + + +D+FV A L+D+Y K   V  A  VFD    +D V+W
Sbjct: 176 CAALLDLGAGREVHDRVMRTSWAADVFVCAGLIDMYAKCGCVDEAWAVFDSTTVRDAVVW 235

Query: 178 NSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGL 237
           NSMI+   +N    +++ +  +M   G      T V+A+  A A+   L  G E+   G 
Sbjct: 236 NSMIAACGQNGRPAEALALCRNMAAEGIAPTIVTLVSAIS-AAADAGALPRGRELHGYGW 294

Query: 238 KLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLR 297
           + GF     + T L+  Y+K G V  A +LF  +   +LIS NAMI G+  +G  + +  
Sbjct: 295 RRGFGSQDKLKTSLLDMYAKSGWVTVARVLFDQLFHRELISWNAMICGFGMHGHADHACE 354

Query: 298 LFRQLLASAERV-NSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNS-SVLTALSTV 355
           LFR++   A+ + +  T VG++                S C   G+V  +  V   + TV
Sbjct: 355 LFRRMRNEAQVMPDHITFVGVL----------------SACNHGGMVQEAKEVFDLMVTV 398

Query: 356 YSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTV 415
           Y               S +  +  +  ++     +G  +EA  + + M    V P+    
Sbjct: 399 Y---------------SIKPMVQHYTCLVDVLGHSGRFKEASDVIKGML---VKPDSGIW 440

Query: 416 SSILSACAQLGAISLGKW-VHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMS 474
            ++L+ C     + L +  +H+L++    ++  YV   L ++YA+ G   EA  +  LM+
Sbjct: 441 GALLNGCKIHKNVELAELALHKLIELEPEDAGNYV--LLSNIYAQSGKWEEAARVRKLMT 498

Query: 475 HK 476
           ++
Sbjct: 499 NR 500


>gi|356547226|ref|XP_003542017.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g37170-like [Glycine max]
          Length = 693

 Score =  417 bits (1071), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 210/536 (39%), Positives = 323/536 (60%), Gaps = 3/536 (0%)

Query: 251 LVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVN 310
           ++  Y+K G +E+A  LF ++ + D  S NA ISGY  + +   +L LFR ++   ER +
Sbjct: 159 MIVGYAKLGRLEQARKLFDEMPQRDNFSWNAAISGYVTHNQPREALELFR-VMQRHERSS 217

Query: 311 SS--TIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKL 368
           S+  T+   +        L L   IH + +++ +  +  V +AL  +Y +   ++ AR +
Sbjct: 218 SNKFTLSSALAASAAIPCLRLGKEIHGYLIRTELNLDEVVWSALLDLYGKCGSLDEARGI 277

Query: 369 FDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAI 428
           FD+  ++ + SW  MI    ++G  EE   LF+++  S V PN  T + +L+ACA   A 
Sbjct: 278 FDQMKDRDVVSWTTMIHRCFEDGRREEGFLLFRDLMQSGVRPNEYTFAGVLNACADHAAE 337

Query: 429 SLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGY 488
            LGK VH  +    ++   +  +AL+ MY+KCGN   AR +F+ M     V+W ++I GY
Sbjct: 338 HLGKEVHGYMMHAGYDPGSFAISALVHMYSKCGNTRVARRVFNEMHQPDLVSWTSLIVGY 397

Query: 489 GLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPL 548
             +G   EAL  F  +L SG +P  VT++ VL AC+HAGLV +G E F S+   HG    
Sbjct: 398 AQNGQPDEALHFFELLLQSGTKPDQVTYVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHT 457

Query: 549 AEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLF 608
           A+HYAC++D+L R+G+ ++A   I  + V+P   +W +LLG C IH +  LA+ A++ L+
Sbjct: 458 ADHYACVIDLLARSGRFKEAENIIDNMPVKPDKFLWASLLGGCRIHGNLELAKRAAKALY 517

Query: 609 ELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGD 668
           E++PEN   ++ L+NIY+    + + A VR+ +    + K PG + IE+    HVF  GD
Sbjct: 518 EIEPENPATYITLANIYANAGLWSEVANVRKDMDNMGIVKKPGKSWIEIKRQVHVFLVGD 577

Query: 669 QLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIA 728
             HP+++ I+  L +L+ K++E G+  +T   LHDVEEE+KE  +  HSEKLA+ FG+I+
Sbjct: 578 TSHPKTSDIHEFLGELSKKIKEEGYVPDTNFVLHDVEEEQKEQNLVYHSEKLAVVFGIIS 637

Query: 729 TEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           T PGT I++ KNLR C+DCHTA K+ISK+  R I VRD+NRFH F+ G CSC DYW
Sbjct: 638 TPPGTPIKVFKNLRTCVDCHTAIKYISKIVQRKITVRDSNRFHCFEDGSCSCKDYW 693



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 122/471 (25%), Positives = 218/471 (46%), Gaps = 34/471 (7%)

Query: 102 TALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKF----- 156
           T   P    YS +++A        +G  +H H   S +   +F+   L+D+Y K      
Sbjct: 81  TDHRPSARVYSTLIAACVRHRALELGRRVHAHTKASNFVPGVFISNRLLDMYAKCGSLVD 140

Query: 157 --------------SW------------VKSARKVFDKMPEKDTVLWNSMISGLMKNCCF 190
                         SW            ++ ARK+FD+MP++D   WN+ ISG + +   
Sbjct: 141 AQMLFDEMGHRDLCSWNTMIVGYAKLGRLEQARKLFDEMPQRDNFSWNAAISGYVTHNQP 200

Query: 191 QDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTG 250
           ++++ +F  M R+  +  +  ++++ L A A +  LRLG EI    ++   +    V + 
Sbjct: 201 REALELFRVMQRHERSSSNKFTLSSALAASAAIPCLRLGKEIHGYLIRTELNLDEVVWSA 260

Query: 251 LVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVN 310
           L+  Y KCG ++ A  +F  +   D++S   MI     +G+ E    LFR L+ S  R N
Sbjct: 261 LLDLYGKCGSLDEARGIFDQMKDRDVVSWTTMIHRCFEDGRREEGFLLFRDLMQSGVRPN 320

Query: 311 SSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFD 370
             T  G++         HL   +H + + +G    S  ++AL  +YS+      AR++F+
Sbjct: 321 EYTFAGVLNACADHAAEHLGKEVHGYMMHAGYDPGSFAISALVHMYSKCGNTRVARRVFN 380

Query: 371 ESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISL 430
           E  +  L SW ++I GY QNG  +EA+  F+ +  S   P+ VT   +LSAC   G +  
Sbjct: 381 EMHQPDLVSWTSLIVGYAQNGQPDEALHFFELLLQSGTKPDQVTYVGVLSACTHAGLVDK 440

Query: 431 G-KWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSE-VTWNTMISGY 488
           G ++ H + +             +ID+ A+ G   EA  + D M  K +   W +++ G 
Sbjct: 441 GLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFKEAENIIDNMPVKPDKFLWASLLGGC 500

Query: 489 GLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSM 539
            +HG+ LE  +  ++ L+     +  T++++    ++AGL  E   + + M
Sbjct: 501 RIHGN-LELAKRAAKALYEIEPENPATYITLANIYANAGLWSEVANVRKDM 550



 Score =  132 bits (332), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 98/375 (26%), Positives = 179/375 (47%), Gaps = 10/375 (2%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           AR LF  +P+ D F +N  I G+  +  P+ ++  +  ++++   + + FT S  L+A++
Sbjct: 172 ARKLFDEMPQRDNFSWNAAISGYVTHNQPREALELFRVMQRHERSSSNKFTLSSALAASA 231

Query: 120 ACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNS 179
           A     +G  +HG+ I +    D  V +AL+DLY K   +  AR +FD+M ++D V W +
Sbjct: 232 AIPCLRLGKEIHGYLIRTELNLDEVVWSALLDLYGKCGSLDEARGIFDQMKDRDVVSWTT 291

Query: 180 MISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKL 239
           MI    ++   ++   +F D++++ G   +  + A VL A A+     LG E+    +  
Sbjct: 292 MIHRCFEDGRREEGFLLFRDLMQS-GVRPNEYTFAGVLNACADHAAEHLGKEVHGYMMHA 350

Query: 240 GFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLF 299
           G+    + ++ LV  YSKCG    A  +F ++ +PDL+S  ++I GY  NG+ + +L  F
Sbjct: 351 GYDPGSFAISALVHMYSKCGNTRVARRVFNEMHQPDLVSWTSLIVGYAQNGQPDEALHFF 410

Query: 300 RQLLASAERVNSSTIVGLIPVFYPFGHLHL-TNCIHSFCLKSGIVSNSSVLTALSTVYSR 358
             LL S  + +  T VG++      G +       HS   K G++  +     +  + +R
Sbjct: 411 ELLLQSGTKPDQVTYVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLAR 470

Query: 359 LNEMEAARKLFDESSEKSLAS-WNAMIAGYTQNG---LTEEAISLFQEMQASKVAPNPVT 414
               + A  + D    K     W +++ G   +G   L + A     E++      NP T
Sbjct: 471 SGRFKEAENIIDNMPVKPDKFLWASLLGGCRIHGNLELAKRAAKALYEIEPE----NPAT 526

Query: 415 VSSILSACAQLGAIS 429
             ++ +  A  G  S
Sbjct: 527 YITLANIYANAGLWS 541



 Score =  113 bits (282), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 83/294 (28%), Positives = 130/294 (44%), Gaps = 34/294 (11%)

Query: 327 LHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAG 386
           L L   +H+    S  V    +   L  +Y++   +  A+ LFDE   + L SWN MI G
Sbjct: 103 LELGRRVHAHTKASNFVPGVFISNRLLDMYAKCGSLVDAQMLFDEMGHRDLCSWNTMIVG 162

Query: 387 YTQNGLTEEAISLFQEM--------------------------------QASKVAPNPVT 414
           Y + G  E+A  LF EM                                +  + + N  T
Sbjct: 163 YAKLGRLEQARKLFDEMPQRDNFSWNAAISGYVTHNQPREALELFRVMQRHERSSSNKFT 222

Query: 415 VSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMS 474
           +SS L+A A +  + LGK +H  +       +  V +AL+D+Y KCG++ EAR +FD M 
Sbjct: 223 LSSALAASAAIPCLRLGKEIHGYLIRTELNLDEVVWSALLDLYGKCGSLDEARGIFDQMK 282

Query: 475 HKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDE 534
            +  V+W TMI      G   E   LF +++ SG+RP+  TF  VL AC+       G E
Sbjct: 283 DRDVVSWTTMIHRCFEDGRREEGFLLFRDLMQSGVRPNEYTFAGVLNACADHAAEHLGKE 342

Query: 535 IFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALL 588
           +   M+H  G+ P +   + +V +  + G    A      +  +P    W +L+
Sbjct: 343 VHGYMMHA-GYDPGSFAISALVHMYSKCGNTRVARRVFNEMH-QPDLVSWTSLI 394



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 45/116 (38%), Positives = 70/116 (60%), Gaps = 3/116 (2%)

Query: 389 QNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIY 448
           Q    +EA+ L   +  +   P+    S++++AC +  A+ LG+ VH   K+ NF   ++
Sbjct: 67  QQKRVKEAVEL---LHRTDHRPSARVYSTLIAACVRHRALELGRRVHAHTKASNFVPGVF 123

Query: 449 VSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEM 504
           +S  L+DMYAKCG++V+A+ LFD M H+   +WNTMI GY   G   +A +LF EM
Sbjct: 124 ISNRLLDMYAKCGSLVDAQMLFDEMGHRDLCSWNTMIVGYAKLGRLEQARKLFDEM 179



 Score = 58.9 bits (141), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 76/162 (46%), Gaps = 9/162 (5%)

Query: 27  QTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNE 86
           + H  ++  G+      ++ L H  S    T  AR +F  + +PDL  +  +I G++ N 
Sbjct: 342 EVHGYMMHAGYDPGSFAISALVHMYSKCGNTRVARRVFNEMHQPDLVSWTSLIVGYAQNG 401

Query: 87  MPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYG----SD 142
            P  ++ F+  L + +   PD  TY  VLSA +       G L + H+I   +G    +D
Sbjct: 402 QPDEALHFFELLLQ-SGTKPDQVTYVGVLSACTHAGLVDKG-LEYFHSIKEKHGLMHTAD 459

Query: 143 LFVGAALVDLYFKFSWVKSARKVFDKMPEK-DTVLWNSMISG 183
            +  A ++DL  +    K A  + D MP K D  LW S++ G
Sbjct: 460 HY--ACVIDLLARSGRFKEAENIIDNMPVKPDKFLWASLLGG 499


>gi|414880744|tpg|DAA57875.1| TPA: hypothetical protein ZEAMMB73_657034, partial [Zea mays]
          Length = 1822

 Score =  417 bits (1071), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 203/436 (46%), Positives = 282/436 (64%), Gaps = 1/436 (0%)

Query: 349  LTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKV 408
            +TA+    +   +++AAR LFD   ++   +W+AMIAGY   G + EA+ LF EM ++  
Sbjct: 1388 VTAMVAALAAGGDVDAARDLFDGMPQRDHVAWSAMIAGYMHVGRSREALMLFDEMLSAGT 1447

Query: 409  APNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARE 468
                 T+ S+L+ACAQ+G +  GKWVH  V+SR  + +I + TAL+DMY+KCG +V A E
Sbjct: 1448 TVGEATLVSVLTACAQIGTLDRGKWVHWYVRSRGMQMSIKLGTALVDMYSKCGAVVTAME 1507

Query: 469  LFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGL 528
            +F+ M+ ++  TW + +SG  ++G G E LQLF  M  +GI+P+GV+F++VL  CS AGL
Sbjct: 1508 VFESMAERNVYTWTSAVSGLAMNGMGTECLQLFKRMEGAGIQPNGVSFVAVLRGCSMAGL 1567

Query: 529  VREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALL 588
            V EG   F SM   +G  P  EHY CMVD+ GRAG+L+ A+ FI  + +EP   VWGALL
Sbjct: 1568 VDEGRACFDSM-DKYGVDPWPEHYGCMVDLYGRAGRLDDAISFINDMPMEPHEGVWGALL 1626

Query: 589  GACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAK 648
             A  IH   +L + A +KL  ++ EN   HV LSNIY+  +++   + VR ++K + + K
Sbjct: 1627 NASRIHNSVDLGKYALDKLLAIESENDAAHVQLSNIYAESQNWKGVSRVRGMMKAKGVKK 1686

Query: 649  APGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEE 708
             PG + IEV G  H F  G +LHP+   I  ML +++ ++R  G+   T   L D+EEEE
Sbjct: 1687 VPGWSTIEVDGKVHEFYVGGRLHPRYNEIELMLAEMDRRLRLQGYTANTREVLFDIEEEE 1746

Query: 709  KELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDAN 768
            KE  + +HSEKLA+AFGLI      EIRI+KNLRVC+DCH   K +SKV  R IV+RD N
Sbjct: 1747 KEGAISLHSEKLALAFGLIVLPEDVEIRIVKNLRVCMDCHRYIKLVSKVFNREIVMRDRN 1806

Query: 769  RFHHFKGGVCSCGDYW 784
            RFHHFKGG CSC DYW
Sbjct: 1807 RFHHFKGGECSCRDYW 1822



 Score =  106 bits (264), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 57/248 (22%), Positives = 125/248 (50%), Gaps = 1/248 (0%)

Query: 245  VYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLA 304
            V  +T +V+  +  G+V+ A  LF  + + D ++ +AMI+GY   G++  +L LF ++L+
Sbjct: 1385 VVCVTAMVAALAAGGDVDAARDLFDGMPQRDHVAWSAMIAGYMHVGRSREALMLFDEMLS 1444

Query: 305  SAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEA 364
            +   V  +T+V ++      G L     +H +    G+  +  + TAL  +YS+   +  
Sbjct: 1445 AGTTVGEATLVSVLTACAQIGTLDRGKWVHWYVRSRGMQMSIKLGTALVDMYSKCGAVVT 1504

Query: 365  ARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQ 424
            A ++F+  +E+++ +W + ++G   NG+  E + LF+ M+ + + PN V+  ++L  C+ 
Sbjct: 1505 AMEVFESMAERNVYTWTSAVSGLAMNGMGTECLQLFKRMEGAGIQPNGVSFVAVLRGCSM 1564

Query: 425  LGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELF-DLMSHKSEVTWNT 483
             G +  G+   + +     +        ++D+Y + G + +A     D+     E  W  
Sbjct: 1565 AGLVDEGRACFDSMDKYGVDPWPEHYGCMVDLYGRAGRLDDAISFINDMPMEPHEGVWGA 1624

Query: 484  MISGYGLH 491
            +++   +H
Sbjct: 1625 LLNASRIH 1632



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 108/526 (20%), Positives = 204/526 (38%), Gaps = 103/526 (19%)

Query: 14   SLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLF 73
            +LL      S L   HA +++ G     S +      L+      YAR +    P   L 
Sbjct: 1216 TLLPSLAEASHLRALHAHLVVSGRLASPSHLAAFLASLASSNHLSYARLVLPQRPA-TLL 1274

Query: 74   LFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLS--------------AAS 119
              N  IR  +    P    C      ++  L PD+++ +F++                ++
Sbjct: 1275 AHNAFIRALARGPRP----CLAFAAFRDLPLPPDHYSLNFLVRAATALVASAAEEKHVSA 1330

Query: 120  ACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKS------------------ 161
                R   V  HG A+  G+ +D  V + ++ +Y     V S                  
Sbjct: 1331 EVNARLQAVSAHGAAVRWGHAADPHVQSGVLSMYAALGDVASSRAAFAEIACPDVVCVTA 1390

Query: 162  -------------ARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWL 208
                         AR +FD MP++D V W++MI+G M     ++++ +F +M+ + GT +
Sbjct: 1391 MVAALAAGGDVDAARDLFDGMPQRDHVAWSAMIAGYMHVGRSREALMLFDEML-SAGTTV 1449

Query: 209  DSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLF 268
               ++ +VL A A++  L  G  +       G    + + T LV  YSKCG V  A  +F
Sbjct: 1450 GEATLVSVLTACAQIGTLDRGKWVHWYVRSRGMQMSIKLGTALVDMYSKCGAVVTAMEVF 1509

Query: 269  RDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLH 328
              +   ++ +  + +SG   NG     L+LF+++  +  + N  + V ++          
Sbjct: 1510 ESMAERNVYTWTSAVSGLAMNGMGTECLQLFKRMEGAGIQPNGVSFVAVL---------- 1559

Query: 329  LTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASW----NAMI 384
                    C  +G+V                   +  R  FD   +  +  W      M+
Sbjct: 1560 ------RGCSMAGLV-------------------DEGRACFDSMDKYGVDPWPEHYGCMV 1594

Query: 385  AGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHE---LVKSR 441
              Y + G  ++AIS   +M    + P+     ++L+A     ++ LGK+  +    ++S 
Sbjct: 1595 DLYGRAGRLDDAISFINDM---PMEPHEGVWGALLNASRIHNSVDLGKYALDKLLAIESE 1651

Query: 442  NFESNIYVSTALIDMYAKCGN---IVEARELFDLMSHKSEVTWNTM 484
            N  +++ +S    ++YA+  N   +   R +      K    W+T+
Sbjct: 1652 NDAAHVQLS----NIYAESQNWKGVSRVRGMMKAKGVKKVPGWSTI 1693


>gi|125532437|gb|EAY79002.1| hypothetical protein OsI_34111 [Oryza sativa Indica Group]
          Length = 847

 Score =  417 bits (1071), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 235/668 (35%), Positives = 370/668 (55%), Gaps = 11/668 (1%)

Query: 123 DRSIGVLLHGHAIVSGYGS-DLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMI 181
           D   G LLH   ++SG  +   F+   L+ +Y   + + SA ++F  MP ++ V W +++
Sbjct: 185 DLRRGRLLHARLVLSGAAAASTFLANHLITMYSHCADLASALRLFAAMPRRNAVSWTTLV 244

Query: 182 SGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLG-LKLG 240
           SGL +N    D++  F  M R G   +  T  A    A A            C     +G
Sbjct: 245 SGLSQNLMHADALAAFAAMRRAG---VAPTRFALSSAARAAAALGAPLRARSCTASASVG 301

Query: 241 FHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFR 300
           F   ++V + L   YSKCG +  A  +F  + + D ++  AMI GY  NG  E+++  FR
Sbjct: 302 FDTELFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKNGSLEAAVLSFR 361

Query: 301 QLLASAERVNSSTIVGLIPVFYPFGHLH---LTNCIHSFCLKSGIVSNSSVLTALSTVYS 357
            +    E +  +       V    G L    L+  IH    K+G     +V  AL  +Y+
Sbjct: 362 DM--KREGLVGADQHVFCSVLSASGGLKDGWLSKSIHCCVTKAGFELEVAVRNALIDMYA 419

Query: 358 RLNEMEAARKLFD-ESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVS 416
           +  ++E+A ++   +    ++ S  +MI GY +    EEA+ ++ E++   V PN  T S
Sbjct: 420 KSMDVESASRVLKIDPGGWNVVSGTSMIDGYIETDCVEEALVIYVELRRQGVEPNEFTFS 479

Query: 417 SILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHK 476
           S++  CA    +  G  +H  V   +   + +V + L+DMY KCG I  + +LF+ + ++
Sbjct: 480 SMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGSTLVDMYGKCGLISLSMQLFNEIEYR 539

Query: 477 SEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIF 536
           +++ WN +I+ +  HGHG EA+Q F  M++SGIRP+ + F+S+L ACSHAGLV EG + F
Sbjct: 540 TDIAWNAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIAFVSLLTACSHAGLVDEGLKYF 599

Query: 537 QSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKD 596
            SM   HG +P  EHY+C++D  GRAG+L++A +FI  + ++P    W +LLGAC +   
Sbjct: 600 YSMKEAHGIEPKEEHYSCIIDTYGRAGRLDEAYKFISEMPIKPNAYGWCSLLGACRMRGS 659

Query: 597 TNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIE 656
             L  VA++ L +L+P N G HV LS IY++   +     VR++++  ++ K PG + ++
Sbjct: 660 KELGEVAAQNLMKLEPGNTGIHVSLSGIYASLGQWEDVKAVRKLMRDSRIKKLPGFSWVD 719

Query: 657 VGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVH 716
                HVF S D  HPQ   IY  LE+L  +++E G+  +T     ++E+  KE +++ H
Sbjct: 720 SNKKTHVFGSEDWSHPQQKDIYEKLEELTTRIKEEGYIPDTSFLPCNLEDIAKERILRYH 779

Query: 717 SEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGG 776
           SE++A+AF LI+      I + KNLR+C+DCHTA KFI KV  R I+VRD +RFHHF  G
Sbjct: 780 SERIAVAFALISMPATKPIIVKKNLRICIDCHTAFKFICKVERRDIIVRDNSRFHHFVNG 839

Query: 777 VCSCGDYW 784
            CSCGDYW
Sbjct: 840 RCSCGDYW 847



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 133/556 (23%), Positives = 232/556 (41%), Gaps = 62/556 (11%)

Query: 123 DRSIGVLLHGHAIVSGYGS-DLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMI 181
           D   G LLH   ++SG  +   F+   L+ +Y   + + SA ++F  MP ++ V W +++
Sbjct: 35  DLRRGRLLHARLVLSGAAAASTFLANHLITMYSHCADLASALRLFAAMPRRNAVSWTTLV 94

Query: 182 SGLMKNCCFQDSIWVFGDMVRNG-------------GTWLDSTSVAAV------------ 216
           SGL +N    D++  F  M R G              T     ++AA             
Sbjct: 95  SGLSQNLMHADALAAFAAMRRAGVAPTRLIYETKFHNTLGPKHTLAASHCHSGPTLMVKY 154

Query: 217 -------LPAVAEVQELRLGMEIQCLG----LKLGFHDHV-YVLTG-----------LVS 253
                   PA A    + L   +Q  G    L+ G   H   VL+G           L++
Sbjct: 155 WGQRLWRPPAPAAATTVHLASLLQSCGRAGDLRRGRLLHARLVLSGAAAASTFLANHLIT 214

Query: 254 FYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCN---GKTESSLRLFRQLLASAERVN 310
            YS C ++  A  LF  + R + +S   ++SG + N       ++    R+   +  R  
Sbjct: 215 MYSHCADLASALRLFAAMPRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRFA 274

Query: 311 SSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFD 370
            S+                 +C  S  +  G  +   V + L+ +YS+   +  A ++FD
Sbjct: 275 LSSAARAAAALGAPLRAR--SCTASASV--GFDTELFVASNLADMYSKCGLLSEACRVFD 330

Query: 371 ESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASK-VAPNPVTVSSILSACAQLGAIS 429
           +  +K   +W AMI GY +NG  E A+  F++M+    V  +     S+LSA   L    
Sbjct: 331 QMPQKDAVAWTAMIDGYAKNGSLEAAVLSFRDMKREGLVGADQHVFCSVLSASGGLKDGW 390

Query: 430 LGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNT-MISGY 488
           L K +H  V    FE  + V  ALIDMYAK  ++  A  +  +      V   T MI GY
Sbjct: 391 LSKSIHCCVTKAGFELEVAVRNALIDMYAKSMDVESASRVLKIDPGGWNVVSGTSMIDGY 450

Query: 489 GLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPL 548
                  EAL ++ E+   G+ P+  TF S++  C+   L+ +G ++   +I     +  
Sbjct: 451 IETDCVEEALVIYVELRRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRD- 509

Query: 549 AEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLF 608
           +   + +VD+ G+ G +  +++    +      A W A++     H     A  A +++ 
Sbjct: 510 SFVGSTLVDMYGKCGLISLSMQLFNEIEYRTDIA-WNAVINVFAQHGHGREAIQAFDRMI 568

Query: 609 E--LDPENVGYHVLLS 622
              + P ++ +  LL+
Sbjct: 569 YSGIRPNHIAFVSLLT 584



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 103/440 (23%), Positives = 189/440 (42%), Gaps = 38/440 (8%)

Query: 36  GFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFY 95
           GF  +L   + LA   S       A  +F  +P+ D   +  +I G++ N   ++++  +
Sbjct: 301 GFDTELFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKNGSLEAAVLSF 360

Query: 96  THLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFK 155
             +++   +  D   +  VLSA+    D  +   +H     +G+  ++ V  AL+D+Y K
Sbjct: 361 RDMKREGLVGADQHVFCSVLSASGGLKDGWLSKSIHCCVTKAGFELEVAVRNALIDMYAK 420

Query: 156 FSWVKSARKVFDKMPEK-DTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVA 214
              V+SA +V    P   + V   SMI G ++  C ++++ ++ ++ R  G   +  + +
Sbjct: 421 SMDVESASRVLKIDPGGWNVVSGTSMIDGYIETDCVEEALVIYVEL-RRQGVEPNEFTFS 479

Query: 215 AVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRP 274
           +++   A    L  G ++    +K       +V + LV  Y KCG +  +  LF +I   
Sbjct: 480 SMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGSTLVDMYGKCGLISLSMQLFNEIEYR 539

Query: 275 DLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIH 334
             I+ NA+I+ +  +G    +++ F +++ S  R N    V L           LT C H
Sbjct: 540 TDIAWNAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIAFVSL-----------LTACSH 588

Query: 335 SFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTE 394
           +  +  G          L   YS    M+ A  +     E     ++ +I  Y + G  +
Sbjct: 589 AGLVDEG----------LKYFYS----MKEAHGI-----EPKEEHYSCIIDTYGRAGRLD 629

Query: 395 EAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGK-WVHELVKSRNFESNIYVSTAL 453
           EA     EM    + PN     S+L AC   G+  LG+     L+K     + I+VS  L
Sbjct: 630 EAYKFISEM---PIKPNAYGWCSLLGACRMRGSKELGEVAAQNLMKLEPGNTGIHVS--L 684

Query: 454 IDMYAKCGNIVEARELFDLM 473
             +YA  G   + + +  LM
Sbjct: 685 SGIYASLGQWEDVKAVRKLM 704



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 55/238 (23%), Positives = 104/238 (43%), Gaps = 50/238 (21%)

Query: 325 GHLHLTNCIHSFCLKSGIVSNSSVLTA-LSTVYSRLNEMEAARKLFDESSEKSLASWNAM 383
           G L     +H+  + SG  + S+ L   L T+YS   ++ +A +LF     ++  SW  +
Sbjct: 34  GDLRRGRLLHARLVLSGAAAASTFLANHLITMYSHCADLASALRLFAAMPRRNAVSWTTL 93

Query: 384 IAGYTQNGLTEEAISLFQEMQASKVAP--------------------------------- 410
           ++G +QN +  +A++ F  M+ + VAP                                 
Sbjct: 94  VSGLSQNLMHADALAAFAAMRRAGVAPTRLIYETKFHNTLGPKHTLAASHCHSGPTLMVK 153

Query: 411 ---------------NPVTVSSILSACAQLGAISLGKWVH-ELVKSRNFESNIYVSTALI 454
                            V ++S+L +C + G +  G+ +H  LV S    ++ +++  LI
Sbjct: 154 YWGQRLWRPPAPAAATTVHLASLLQSCGRAGDLRRGRLLHARLVLSGAAAASTFLANHLI 213

Query: 455 DMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPS 512
            MY+ C ++  A  LF  M  ++ V+W T++SG   +    +AL  F+ M  +G+ P+
Sbjct: 214 TMYSHCADLASALRLFAAMPRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPT 271



 Score = 55.8 bits (133), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 58/238 (24%), Positives = 105/238 (44%), Gaps = 23/238 (9%)

Query: 406 SKVAPNPVTVSSILSACAQLGAISLGKWVH-ELVKSRNFESNIYVSTALIDMYAKCGNIV 464
           +  A   V ++S+L +C + G +  G+ +H  LV S    ++ +++  LI MY+ C ++ 
Sbjct: 14  APAAATTVHLASLLQSCGRAGDLRRGRLLHARLVLSGAAAASTFLANHLITMYSHCADLA 73

Query: 465 EARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLY--- 521
            A  LF  M  ++ V+W T++SG   +    +AL  F+ M  +G+ P+ + + +  +   
Sbjct: 74  SALRLFAAMPRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRLIYETKFHNTL 133

Query: 522 ------ACSHAGLVREGDEIFQSMIHDHGFKPLAE------HYACMVDILGRAGQLEKAL 569
                 A SH      G  +         ++P A       H A ++   GRAG L +  
Sbjct: 134 GPKHTLAASH---CHSGPTLMVKYWGQRLWRPPAPAAATTVHLASLLQSCGRAGDLRRG- 189

Query: 570 EFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASE-KLFELDPEN--VGYHVLLSNI 624
             +    V  G A     L   +I   ++ A +AS  +LF   P    V +  L+S +
Sbjct: 190 RLLHARLVLSGAAAASTFLANHLITMYSHCADLASALRLFAAMPRRNAVSWTTLVSGL 247


>gi|296088174|emb|CBI35666.3| unnamed protein product [Vitis vinifera]
          Length = 762

 Score =  417 bits (1071), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 231/627 (36%), Positives = 346/627 (55%), Gaps = 11/627 (1%)

Query: 163 RKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAE 222
           +KVFD+M  K+ V W  +IS   KN   + +I +F DM +  G   +S    ++L +   
Sbjct: 142 QKVFDEMLMKNLVSWVIVISAYAKNGELEKAIRLFSDM-QASGIRPNSAVYMSLLQSCLG 200

Query: 223 VQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAM 282
              L LG +I    ++   + ++ V T + + Y +CG +E A+L+F  +   + ++   +
Sbjct: 201 PSFLELGKQIHSHVIRAQLNANITVETAICNMYVRCGWLEGAKLVFDGMDAQNAVTWTGL 260

Query: 283 ISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGI 342
           + GYT   K E +L LF ++      ++      ++ V        +   IHS  +K G 
Sbjct: 261 MVGYTQAKKLEVALELFARMAMEGVELDEFVFSIVLKVCCGLEDWDMGRQIHSHIVKLGA 320

Query: 343 VSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQE 402
            S  SV T L   Y +  ++E+A + F   SE +  SW+A+I+G++Q+G  E+ I +F  
Sbjct: 321 ESEVSVGTPLVDFYVKCGDIESAYRSFGRISEPNDVSWSALISGFSQSGRLEDCIKIFTS 380

Query: 403 MQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGN 462
           +++  V  N    +S+  ACA    +++G   H     R   S +Y  +A++ MY+KCG 
Sbjct: 381 LRSEGVVLNSFIYTSVFQACAAQANLNMGSQAHGDAIKRGLVSYLYGESAMVTMYSKCGR 440

Query: 463 IVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYA 522
           +  AR  F+ +     V W  +ISGY  HG+  EAL  F  M   G+RP+ VTF++VL A
Sbjct: 441 LDYARRAFESIDEPDAVAWTAIISGYAYHGNAAEALGFFRRMQSYGVRPNAVTFIAVLTA 500

Query: 523 CSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPA 582
           CSH+GLV E  +   SM  D+G KP  +HY CM+D   RAG L++ALE I  +  EP   
Sbjct: 501 CSHSGLVAEAKQYLGSMSRDYGVKPTIDHYDCMIDTYSRAGLLQEALELINRMPFEPDAM 560

Query: 583 VWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVK 642
            W +LLG C  H D  L ++A+E LF LDP +   ++LL N+YSA   + +A  VR+++ 
Sbjct: 561 SWKSLLGGCWAHCDLKLGKIAAENLFRLDPGDTAGYILLFNLYSAFGKWEEAGHVRKLMA 620

Query: 643 KRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEK-----LNGKMREAGFQTET 697
           +R+L K   C+ I V G  H F  GD+ HPQ+ AIY+ LE+     ++  +R    + + 
Sbjct: 621 ERELKKEVSCSWISVKGQVHRFVVGDRHHPQTEAIYSKLEEFKCSVIDSPVRLLNEEDDV 680

Query: 698 VTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKV 757
             +L       KE ++  HSEKLAIAFGLI+TE    I + KNLR C DCH   K +S V
Sbjct: 681 SCSL----SARKEQLLD-HSEKLAIAFGLISTEDNAPILVFKNLRACRDCHEFGKQVSMV 735

Query: 758 TGRVIVVRDANRFHHFKGGVCSCGDYW 784
           TGR IVVRD+ RFHHFK G CSC DYW
Sbjct: 736 TGRQIVVRDSTRFHHFKSGKCSCNDYW 762



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 110/433 (25%), Positives = 220/433 (50%), Gaps = 4/433 (0%)

Query: 61  RALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASA 120
           + +F  +   +L  + ++I  ++ N   + +I  ++ ++  + + P++  Y  +L +   
Sbjct: 142 QKVFDEMLMKNLVSWVIVISAYAKNGELEKAIRLFSDMQA-SGIRPNSAVYMSLLQSCLG 200

Query: 121 CCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSM 180
                +G  +H H I +   +++ V  A+ ++Y +  W++ A+ VFD M  ++ V W  +
Sbjct: 201 PSFLELGKQIHSHVIRAQLNANITVETAICNMYVRCGWLEGAKLVFDGMDAQNAVTWTGL 260

Query: 181 ISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLG 240
           + G  +    + ++ +F  M    G  LD    + VL     +++  +G +I    +KLG
Sbjct: 261 MVGYTQAKKLEVALELFARMAME-GVELDEFVFSIVLKVCCGLEDWDMGRQIHSHIVKLG 319

Query: 241 FHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFR 300
               V V T LV FY KCG++E A   F  I  P+ +S +A+ISG++ +G+ E  +++F 
Sbjct: 320 AESEVSVGTPLVDFYVKCGDIESAYRSFGRISEPNDVSWSALISGFSQSGRLEDCIKIFT 379

Query: 301 QLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLN 360
            L +    +NS     +        +L++ +  H   +K G+VS     +A+ T+YS+  
Sbjct: 380 SLRSEGVVLNSFIYTSVFQACAAQANLNMGSQAHGDAIKRGLVSYLYGESAMVTMYSKCG 439

Query: 361 EMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILS 420
            ++ AR+ F+   E    +W A+I+GY  +G   EA+  F+ MQ+  V PN VT  ++L+
Sbjct: 440 RLDYARRAFESIDEPDAVAWTAIISGYAYHGNAAEALGFFRRMQSYGVRPNAVTFIAVLT 499

Query: 421 ACAQLGAISLGK-WVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSE- 478
           AC+  G ++  K ++  + +    +  I     +ID Y++ G + EA EL + M  + + 
Sbjct: 500 ACSHSGLVAEAKQYLGSMSRDYGVKPTIDHYDCMIDTYSRAGLLQEALELINRMPFEPDA 559

Query: 479 VTWNTMISGYGLH 491
           ++W +++ G   H
Sbjct: 560 MSWKSLLGGCWAH 572



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 93/344 (27%), Positives = 163/344 (47%), Gaps = 2/344 (0%)

Query: 251 LVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVN 310
           L+  Y  CG     + +F +++  +L+S   +IS Y  NG+ E ++RLF  + AS  R N
Sbjct: 128 LLRMYCDCGSCIDVQKVFDEMLMKNLVSWVIVISAYAKNGELEKAIRLFSDMQASGIRPN 187

Query: 311 SSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFD 370
           S+  + L+        L L   IHS  +++ + +N +V TA+  +Y R   +E A+ +FD
Sbjct: 188 SAVYMSLLQSCLGPSFLELGKQIHSHVIRAQLNANITVETAICNMYVRCGWLEGAKLVFD 247

Query: 371 ESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISL 430
               ++  +W  ++ GYTQ    E A+ LF  M    V  +    S +L  C  L    +
Sbjct: 248 GMDAQNAVTWTGLMVGYTQAKKLEVALELFARMAMEGVELDEFVFSIVLKVCCGLEDWDM 307

Query: 431 GKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGL 490
           G+ +H  +     ES + V T L+D Y KCG+I  A   F  +S  ++V+W+ +ISG+  
Sbjct: 308 GRQIHSHIVKLGAESEVSVGTPLVDFYVKCGDIESAYRSFGRISEPNDVSWSALISGFSQ 367

Query: 491 HGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAE 550
            G   + +++F+ +   G+  +   + SV  AC+    +  G +     I   G      
Sbjct: 368 SGRLEDCIKIFTSLRSEGVVLNSFIYTSVFQACAAQANLNMGSQAHGDAIK-RGLVSYLY 426

Query: 551 HYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIH 594
             + MV +  + G+L+ A    + +  EP    W A++     H
Sbjct: 427 GESAMVTMYSKCGRLDYARRAFESID-EPDAVAWTAIISGYAYH 469



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 101/372 (27%), Positives = 174/372 (46%), Gaps = 39/372 (10%)

Query: 107 DNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVF 166
           D F +S VL       D  +G  +H H +  G  S++ VG  LVD Y K   ++SA + F
Sbjct: 288 DEFVFSIVLKVCCGLEDWDMGRQIHSHIVKLGAESEVSVGTPLVDFYVKCGDIESAYRSF 347

Query: 167 DKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQEL 226
            ++ E + V W+++ISG  ++   +D I +F  + R+ G  L+S    +V  A A    L
Sbjct: 348 GRISEPNDVSWSALISGFSQSGRLEDCIKIFTSL-RSEGVVLNSFIYTSVFQACAAQANL 406

Query: 227 RLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGY 286
            +G +     +K G   ++Y  + +V+ YSKCG ++ A   F  I  PD ++  A+ISGY
Sbjct: 407 NMGSQAHGDAIKRGLVSYLYGESAMVTMYSKCGRLDYARRAFESIDEPDAVAWTAIISGY 466

Query: 287 TCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNS 346
             +G    +L  FR++ +   R N+ T + +           LT C H     SG+V+ +
Sbjct: 467 AYHGNAAEALGFFRRMQSYGVRPNAVTFIAV-----------LTACSH-----SGLVAEA 510

Query: 347 -SVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQA 405
              L ++S  Y                 + ++  ++ MI  Y++ GL +EA+ L   M  
Sbjct: 511 KQYLGSMSRDY---------------GVKPTIDHYDCMIDTYSRAGLLQEALELINRM-- 553

Query: 406 SKVAPNPVTVSSILSACAQLGAISLGKWVHE-LVKSRNFESNIYVSTALIDMYAKCGNIV 464
               P+ ++  S+L  C     + LGK   E L +    ++  Y+   L ++Y+  G   
Sbjct: 554 -PFEPDAMSWKSLLGGCWAHCDLKLGKIAAENLFRLDPGDTAGYI--LLFNLYSAFGKWE 610

Query: 465 EARELFDLMSHK 476
           EA  +  LM+ +
Sbjct: 611 EAGHVRKLMAER 622



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 82/248 (33%), Positives = 116/248 (46%), Gaps = 10/248 (4%)

Query: 345 NSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQ 404
           + S+   L  +Y         +K+FDE   K+L SW  +I+ Y +NG  E+AI LF +MQ
Sbjct: 121 SGSIENCLLRMYCDCGSCIDVQKVFDEMLMKNLVSWVIVISAYAKNGELEKAIRLFSDMQ 180

Query: 405 ASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIV 464
           AS + PN     S+L +C     + LGK +H  V      +NI V TA+ +MY +CG + 
Sbjct: 181 ASGIRPNSAVYMSLLQSCLGPSFLELGKQIHSHVIRAQLNANITVETAICNMYVRCGWLE 240

Query: 465 EARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACS 524
            A+ +FD M  ++ VTW  ++ GY        AL+LF+ M   G+      F  VL  C 
Sbjct: 241 GAKLVFDGMDAQNAVTWTGLMVGYTQAKKLEVALELFARMAMEGVELDEFVFSIVLKVC- 299

Query: 525 HAGLVREGDEIFQSMIHDHGFKPLAEHYAC----MVDILGRAGQLEKALEFIKGLAVEPG 580
             GL    D      IH H  K  AE        +VD   + G +E A     G   EP 
Sbjct: 300 -CGL---EDWDMGRQIHSHIVKLGAESEVSVGTPLVDFYVKCGDIESAYRSF-GRISEPN 354

Query: 581 PAVWGALL 588
              W AL+
Sbjct: 355 DVSWSALI 362



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 53/209 (25%), Positives = 104/209 (49%), Gaps = 1/209 (0%)

Query: 381 NAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKS 440
           N  +   ++ G  +EA    +EM  + V+  P +   +  AC +L +++ G+ +H+ ++ 
Sbjct: 56  NLHLVSLSKQGKLKEAHDFLKEMDDADVSVTPHSYQCLFEACGKLRSLADGRLIHDRLRR 115

Query: 441 RNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQL 500
                +  +   L+ MY  CG+ ++ +++FD M  K+ V+W  +IS Y  +G   +A++L
Sbjct: 116 TVKNPSGSIENCLLRMYCDCGSCIDVQKVFDEMLMKNLVSWVIVISAYAKNGELEKAIRL 175

Query: 501 FSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILG 560
           FS+M  SGIRP+   ++S+L +C     +  G +I   +I       +    A + ++  
Sbjct: 176 FSDMQASGIRPNSAVYMSLLQSCLGPSFLELGKQIHSHVIRAQLNANITVETA-ICNMYV 234

Query: 561 RAGQLEKALEFIKGLAVEPGPAVWGALLG 589
           R G LE A     G+  +      G ++G
Sbjct: 235 RCGWLEGAKLVFDGMDAQNAVTWTGLMVG 263



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 42/188 (22%), Positives = 82/188 (43%), Gaps = 16/188 (8%)

Query: 11  LFLSLLKGAKTQSQL---TQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSI 67
           ++ S+ +    Q+ L   +Q H   I  G  + L   + +    S      YAR  F SI
Sbjct: 392 IYTSVFQACAAQANLNMGSQAHGDAIKRGLVSYLYGESAMVTMYSKCGRLDYARRAFESI 451

Query: 68  PKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIG 127
            +PD   +  II G++ +     ++ F+  + ++  + P+  T+  VL+A    C  S G
Sbjct: 452 DEPDAVAWTAIISGYAYHGNAAEALGFFRRM-QSYGVRPNAVTFIAVLTA----CSHS-G 505

Query: 128 VLLHGHAIVSGYGSDLFVGAA------LVDLYFKFSWVKSARKVFDKMP-EKDTVLWNSM 180
           ++      +     D  V         ++D Y +   ++ A ++ ++MP E D + W S+
Sbjct: 506 LVAEAKQYLGSMSRDYGVKPTIDHYDCMIDTYSRAGLLQEALELINRMPFEPDAMSWKSL 565

Query: 181 ISGLMKNC 188
           + G   +C
Sbjct: 566 LGGCWAHC 573


>gi|51090919|dbj|BAD35524.1| selenium-binding protein-like [Oryza sativa Japonica Group]
 gi|51090953|dbj|BAD35556.1| selenium-binding protein-like [Oryza sativa Japonica Group]
          Length = 615

 Score =  417 bits (1071), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 209/570 (36%), Positives = 342/570 (60%), Gaps = 1/570 (0%)

Query: 215 AVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRP 274
           A + A  E + L  G ++    +   +   V++ T LV+ Y +CG ++ A  +   +   
Sbjct: 47  AAITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMPER 106

Query: 275 DLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIH 334
            ++S   MISGY+   +   +L LF ++L +    N  T+  ++        ++    +H
Sbjct: 107 SVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQVH 166

Query: 335 SFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTE 394
           S  +K+   S+  V ++L  +Y++   ++ AR++FD   E+ + S  A+I+GY Q GL E
Sbjct: 167 SLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGLDE 226

Query: 395 EAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALI 454
           EA+ LF+++ +  +  N VT +++++A + L ++  GK VH L+  +     + +  +LI
Sbjct: 227 EALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFFVALQNSLI 286

Query: 455 DMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGV 514
           DMY+KCG ++ +R +FD M  +S V+WN M+ GYG HG G E + LF + LH  ++P  V
Sbjct: 287 DMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLFKD-LHKEVKPDSV 345

Query: 515 TFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKG 574
           T L+VL  CSH GLV EG +IF +++ +        HY C++D+LGR+G+LEKAL  I+ 
Sbjct: 346 TLLAVLSGCSHGGLVDEGLDIFDTVVKEQSALLHTGHYGCIIDLLGRSGRLEKALNLIEN 405

Query: 575 LAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQA 634
           +  E  P++WG+LLGAC +H + ++  + ++KL E++PEN G +V+LSNIY+A   +   
Sbjct: 406 MPFESTPSIWGSLLGACRVHANVHVGELVAQKLLEMEPENAGNYVILSNIYAAAGMWKDV 465

Query: 635 ATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQ 694
             VR+++ ++ + K PG + I +    H F S ++ HP    I A ++++   ++ AGF 
Sbjct: 466 FKVRKLMLEKTVTKEPGQSWIILDKVIHTFHSSERFHPSKKDINAKIKEIFVDIKAAGFV 525

Query: 695 TETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFI 754
            +    LHDV++E+KE M+  HSEKLAI FGL+ T PG  IR++KNLR+C+DCH   KF+
Sbjct: 526 PDLSCVLHDVDDEQKERMLLGHSEKLAITFGLMNTPPGLTIRVMKNLRICVDCHNFAKFV 585

Query: 755 SKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           SKV  R I +RD NRFH    G C+CGDYW
Sbjct: 586 SKVYEREISLRDKNRFHLLTHGNCTCGDYW 615



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 114/408 (27%), Positives = 209/408 (51%), Gaps = 9/408 (2%)

Query: 93  CFYTHLRKNTALTPDNFTYSF--VLSAASACCDRSI---GVLLHGHAIVSGYGSDLFVGA 147
           CF   LR  + +     +  F    +A +AC +R     G  +H   I + Y   +F+G 
Sbjct: 22  CFVAPLRAASGMALPGASARFHEYEAAITACIERRALWEGRQVHARMITARYRPAVFLGT 81

Query: 148 ALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTW 207
            LV +Y +   +  AR V D+MPE+  V W +MISG  +     +++ +F  M+R  G  
Sbjct: 82  RLVTMYVRCGALDDARNVLDRMPERSVVSWTTMISGYSQTERHVEALDLFIKMLR-AGCI 140

Query: 208 LDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELL 267
            +  ++A VL + +  Q +  G ++  L +K  F  H++V + L+  Y+K   ++ A  +
Sbjct: 141 PNEYTLATVLTSCSGPQSIYQGKQVHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRV 200

Query: 268 FRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHL 327
           F  +   D++SC A+ISGY   G  E +L LFRQL +   + N  T   L+        L
Sbjct: 201 FDTLPERDVVSCTAIISGYAQKGLDEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASL 260

Query: 328 HLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGY 387
                +H+  L+  +    ++  +L  +YS+  ++  +R++FD   E+S+ SWNAM+ GY
Sbjct: 261 DYGKQVHALILRKELPFFVALQNSLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGY 320

Query: 388 TQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHE-LVKSRNFESN 446
            ++GL  E ISLF+++   +V P+ VT+ ++LS C+  G +  G  + + +VK ++   +
Sbjct: 321 GRHGLGHEVISLFKDLH-KEVKPDSVTLLAVLSGCSHGGLVDEGLDIFDTVVKEQSALLH 379

Query: 447 IYVSTALIDMYAKCGNIVEARELFDLMSHKSEVT-WNTMISGYGLHGH 493
                 +ID+  + G + +A  L + M  +S  + W +++    +H +
Sbjct: 380 TGHYGCIIDLLGRSGRLEKALNLIENMPFESTPSIWGSLLGACRVHAN 427



 Score =  102 bits (255), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 97/452 (21%), Positives = 204/452 (45%), Gaps = 39/452 (8%)

Query: 27  QTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNE 86
           Q HA++I   ++  +   T+L        A   AR +   +P+  +  +  +I G+S  E
Sbjct: 63  QVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMPERSVVSWTTMISGYSQTE 122

Query: 87  MPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVG 146
               ++  +  + +   + P+ +T + VL++ S       G  +H   + + + S +FVG
Sbjct: 123 RHVEALDLFIKMLRAGCI-PNEYTLATVLTSCSGPQSIYQGKQVHSLLVKTNFESHMFVG 181

Query: 147 AALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGT 206
           ++L+D+Y K   ++ AR+VFD +PE+D V   ++ISG  +    ++++ +F  +    G 
Sbjct: 182 SSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGLDEEALDLFRQLYSE-GM 240

Query: 207 WLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAEL 266
             +  +   ++ A++ +  L  G ++  L L+      V +   L+  YSKCG++  +  
Sbjct: 241 QCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFFVALQNSLIDMYSKCGKLLYSRR 300

Query: 267 LFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGH 326
           +F +++   ++S NAM+ GY  +G     + LF+ L     + +S T++ +         
Sbjct: 301 VFDNMLERSVVSWNAMLMGYGRHGLGHEVISLFKDLHKEV-KPDSVTLLAV--------- 350

Query: 327 LHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAG 386
             L+ C H   +  G+    +V+                    ++S+      +  +I  
Sbjct: 351 --LSGCSHGGLVDEGLDIFDTVVK-------------------EQSALLHTGHYGCIIDL 389

Query: 387 YTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWV-HELVKSRNFES 445
             ++G  E+A++L + M        P    S+L AC     + +G+ V  +L++     +
Sbjct: 390 LGRSGRLEKALNLIENM---PFESTPSIWGSLLGACRVHANVHVGELVAQKLLEMEPENA 446

Query: 446 NIYVSTALIDMYAKCGNIVEARELFDLMSHKS 477
             YV   L ++YA  G   +  ++  LM  K+
Sbjct: 447 GNYV--ILSNIYAAAGMWKDVFKVRKLMLEKT 476


>gi|302785251|ref|XP_002974397.1| hypothetical protein SELMODRAFT_101239 [Selaginella moellendorffii]
 gi|300157995|gb|EFJ24619.1| hypothetical protein SELMODRAFT_101239 [Selaginella moellendorffii]
          Length = 679

 Score =  417 bits (1071), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 231/670 (34%), Positives = 362/670 (54%), Gaps = 41/670 (6%)

Query: 122 CDRSIGVLLHGHAIVS-----GYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVL 176
           C R +G L  G  I       G GSD++V   LV +Y K   ++ AR VF+  P K+   
Sbjct: 44  CAR-LGALAEGRRIHQLMRRVGLGSDVYVSNHLVMMYGKCGSLEEARLVFEATPAKNVFS 102

Query: 177 WNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLG 236
           W  +I+   ++   Q+++ +F +M++ G      +  AA+    A  + L  G  +  L 
Sbjct: 103 WTILITVCAQHGRSQEALALFYEMLKQGIQPHSVSFTAAINACSAGPEFLPAGRALHALL 162

Query: 237 LKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSL 296
            + GF D V   T LVS YSKCG +E +   F  +  P+ +S NAMI+ +  + +   +L
Sbjct: 163 RRYGFQDAVVATTSLVSMYSKCGSLEESMRTFESMTEPNAVSWNAMIAAFAEHRRGLEAL 222

Query: 297 RLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVY 356
           R  +++     R  S  +VG                                 T L  +Y
Sbjct: 223 RTLQKMFLEGIRACSDVVVG---------------------------------TTLVNMY 249

Query: 357 SRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVS 416
           ++ + +  A   F +  E ++ +WN +I+ Y Q+   +EA+ LF+ M    +  + VT  
Sbjct: 250 AKCSGLHDANAAFVKLQEPNIITWNVLISAYVQHCCFKEAMELFRRMLLLGLEMDEVTFI 309

Query: 417 SILSACAQLGAISLGKWVHELVKSRNFESN-IYVSTALIDMYAKCGNIVEARELFDLMSH 475
           +IL AC    A+  G+ +H  V+     SN   +   +++MY KCG++ +A  +F  MS 
Sbjct: 310 NILGACCVPVALEDGRAIHACVREHPLASNHAPLENVILNMYGKCGSLQDAEAMFKSMSQ 369

Query: 476 KSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYA-CSHAGLVREGDE 534
              + WNTMI+ YG HGH  EAL+ +  M   G+ P   T++SV+ A C++AGL  E   
Sbjct: 370 PDVIAWNTMIAAYGQHGHTSEALRFYELMQEEGVVPDDYTYVSVIDASCANAGLPEEAHA 429

Query: 535 IFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIH 594
            F SM  DHG +P   HY CMV+ LG+AG+L  A   I+ +  EP    W + L  C  H
Sbjct: 430 YFVSMQQDHGVRPGGGHYGCMVESLGKAGRLSDAETLIQCMPFEPDVLTWTSFLANCRSH 489

Query: 595 KDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTL 654
            D    ++A++    +DPE    +V L+ I++   D+ +A+ +R+++  R + K  G ++
Sbjct: 490 GDMKRGKLAAKGAIRIDPEASTGYVALARIHADAGDFQEASRIRKLMLDRGIRKNAGRSI 549

Query: 655 IEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMK 714
           I++G + + FT+GDQ +P+S  I+  L++L+ +M+ AG+  +     HDVE  +KE ++ 
Sbjct: 550 IKLGTSVYEFTAGDQSNPRSKEIFDELKRLDKEMKSAGYDPDMAHVAHDVEAGQKEPLLF 609

Query: 715 VHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFK 774
            HSE+LAIAFG+I+T PGT +RI+KNLRVC DCHT TK  SK+T R I+VRD+NRFHHFK
Sbjct: 610 AHSERLAIAFGIISTSPGTPLRIMKNLRVCGDCHTMTKLTSKITRREIIVRDSNRFHHFK 669

Query: 775 GGVCSCGDYW 784
            G CSC D+W
Sbjct: 670 NGSCSCKDFW 679



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 105/402 (26%), Positives = 180/402 (44%), Gaps = 53/402 (13%)

Query: 209 DSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLF 268
           D      V+ + A +  L  G  I  L  ++G    VYV   LV  Y KCG +E A L+F
Sbjct: 33  DLKECVRVIQSCARLGALAEGRRIHQLMRRVGLGSDVYVSNHLVMMYGKCGSLEEARLVF 92

Query: 269 RDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLI------PVFY 322
                 ++ S   +I+    +G+++ +L LF ++L    + +S +    I      P F 
Sbjct: 93  EATPAKNVFSWTILITVCAQHGRSQEALALFYEMLKQGIQPHSVSFTAAINACSAGPEFL 152

Query: 323 PFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNA 382
           P G       +H+   + G        T+L ++YS+   +E + + F+  +E +  SWNA
Sbjct: 153 PAG-----RALHALLRRYGFQDAVVATTSLVSMYSKCGSLEESMRTFESMTEPNAVSWNA 207

Query: 383 MIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRN 442
           MIA + ++    EA+   Q+M    +            AC                    
Sbjct: 208 MIAAFAEHRRGLEALRTLQKMFLEGI-----------RAC-------------------- 236

Query: 443 FESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFS 502
             S++ V T L++MYAKC  + +A   F  +   + +TWN +IS Y  H    EA++LF 
Sbjct: 237 --SDVVVGTTLVNMYAKCSGLHDANAAFVKLQEPNIITWNVLISAYVQHCCFKEAMELFR 294

Query: 503 EMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDIL--- 559
            ML  G+    VTF+++L AC     + +G  I  + + +H   PLA ++A + +++   
Sbjct: 295 RMLLLGLEMDEVTFINILGACCVPVALEDGRAI-HACVREH---PLASNHAPLENVILNM 350

Query: 560 -GRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLA 600
            G+ G L+ A    K ++ +P    W  ++ A   H  T+ A
Sbjct: 351 YGKCGSLQDAEAMFKSMS-QPDVIAWNTMIAAYGQHGHTSEA 391



 Score =  112 bits (280), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 58/191 (30%), Positives = 102/191 (53%), Gaps = 1/191 (0%)

Query: 418 ILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKS 477
           ++ +CA+LGA++ G+ +H+L++     S++YVS  L+ MY KCG++ EAR +F+    K+
Sbjct: 40  VIQSCARLGALAEGRRIHQLMRRVGLGSDVYVSNHLVMMYGKCGSLEEARLVFEATPAKN 99

Query: 478 EVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQ 537
             +W  +I+    HG   EAL LF EML  GI+P  V+F + + ACS             
Sbjct: 100 VFSWTILITVCAQHGRSQEALALFYEMLKQGIQPHSVSFTAAINACSAGPEFLPAGRALH 159

Query: 538 SMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDT 597
           +++  +GF+        +V +  + G LE+++   + +  EP    W A++ A   H+  
Sbjct: 160 ALLRRYGFQDAVVATTSLVSMYSKCGSLEESMRTFESM-TEPNAVSWNAMIAAFAEHRRG 218

Query: 598 NLARVASEKLF 608
             A    +K+F
Sbjct: 219 LEALRTLQKMF 229



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 103/447 (23%), Positives = 183/447 (40%), Gaps = 71/447 (15%)

Query: 29  HAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNEMP 88
           HA +  +GFQ+ +   T L    S   +   +   F S+ +P+   +N +I  F+     
Sbjct: 159 HALLRRYGFQDAVVATTSLVSMYSKCGSLEESMRTFESMTEPNAVSWNAMIAAFAE---- 214

Query: 89  KSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAA 148
                   H R   AL          L    AC                   SD+ VG  
Sbjct: 215 --------HRRGLEAL---RTLQKMFLEGIRAC-------------------SDVVVGTT 244

Query: 149 LVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWL 208
           LV++Y K S +  A   F K+ E + + WN +IS  +++CCF++++ +F  M+   G  +
Sbjct: 245 LVNMYAKCSGLHDANAAFVKLQEPNIITWNVLISAYVQHCCFKEAMELFRRMLLL-GLEM 303

Query: 209 DSTSVAAVLPAVAEVQELRLGMEIQ-CLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELL 267
           D  +   +L A      L  G  I  C+       +H  +   +++ Y KCG ++ AE +
Sbjct: 304 DEVTFINILGACCVPVALEDGRAIHACVREHPLASNHAPLENVILNMYGKCGSLQDAEAM 363

Query: 268 FRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHL 327
           F+ + +PD+I+ N MI+ Y  +G T  +LR +  +             G++P  Y +   
Sbjct: 364 FKSMSQPDVIAWNTMIAAYGQHGHTSEALRFYELMQEE----------GVVPDDYTY--- 410

Query: 328 HLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGY 387
              + I + C  +G+   +         ++    M+      D         +  M+   
Sbjct: 411 --VSVIDASCANAGLPEEA---------HAYFVSMQQ-----DHGVRPGGGHYGCMVESL 454

Query: 388 TQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNI 447
            + G   +A +L Q M      P+ +T +S L+ C   G +  GK   +     + E++ 
Sbjct: 455 GKAGRLSDAETLIQCM---PFEPDVLTWTSFLANCRSHGDMKRGKLAAKGAIRIDPEAST 511

Query: 448 -YVSTALIDMYAKCGNIVEARELFDLM 473
            YV  AL  ++A  G+  EA  +  LM
Sbjct: 512 GYV--ALARIHADAGDFQEASRIRKLM 536



 Score = 43.5 bits (101), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 50/231 (21%), Positives = 92/231 (39%), Gaps = 25/231 (10%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           A A+F S+ +PD+  +N +I  +  +     ++ FY  L +   + PD++TY  V+ A+ 
Sbjct: 360 AEAMFKSMSQPDVIAWNTMIAAYGQHGHTSEALRFY-ELMQEEGVVPDDYTYVSVIDASC 418

Query: 120 ACCDRSIGVLLHGHAIVSGYGSDLFVGAA------LVDLYFKFSWVKSARKVFDKMP-EK 172
           A    + G+    HA       D  V         +V+   K   +  A  +   MP E 
Sbjct: 419 A----NAGLPEEAHAYFVSMQQDHGVRPGGGHYGCMVESLGKAGRLSDAETLIQCMPFEP 474

Query: 173 DTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLD---STSVAAVLPAVAEVQELRLG 229
           D + W S ++      C        G +   G   +D   ST   A+    A+  + +  
Sbjct: 475 DVLTWTSFLAN-----CRSHGDMKRGKLAAKGAIRIDPEASTGYVALARIHADAGDFQEA 529

Query: 230 MEIQCLGLKLGFHDH-----VYVLTGLVSFYSKCGEVERAELLFRDIVRPD 275
             I+ L L  G   +     + + T +  F +      R++ +F ++ R D
Sbjct: 530 SRIRKLMLDRGIRKNAGRSIIKLGTSVYEFTAGDQSNPRSKEIFDELKRLD 580


>gi|217426788|gb|ACK44496.1| AT5G09950-like protein [Arabidopsis arenosa]
          Length = 772

 Score =  416 bits (1070), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 239/652 (36%), Positives = 369/652 (56%), Gaps = 8/652 (1%)

Query: 127 GVLLHGHAIVSGYGSDLF-VGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLM 185
           G  +HGH I +G    +  +G  LV++Y K   +  AR+VF  M EKD+V WNSMI+GL 
Sbjct: 52  GREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFCFMMEKDSVSWNSMITGLD 111

Query: 186 KNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHV 245
           +N CF +++  +  M R+      S ++ + L + A ++  +LG +I    LKLG   +V
Sbjct: 112 QNGCFIEAVERYQSMRRHE-ILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNV 170

Query: 246 YVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKT-ESSLRLFRQLLA 304
            V   L++ Y++ G +     +F  +   D +S N++I     + ++   ++  F   L 
Sbjct: 171 SVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALASSERSLPEAVACFLNALR 230

Query: 305 SAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEA 364
           + +++N  T   ++          L   IH   LK  I   ++   AL   Y +  EM+ 
Sbjct: 231 AGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKYNIADEATTENALIACYGKCGEMDG 290

Query: 365 ARKLFDESSEK-SLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACA 423
             K+F   SE+    +WN+MI+GY  N L  +A+ L   M  +    +    +++LSA A
Sbjct: 291 CEKIFSRMSERRDDVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFA 350

Query: 424 QLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNT 483
            +  +  G  VH        ES++ V +AL+DMY+KCG +  A   F+ M  ++  +WN+
Sbjct: 351 SVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNS 410

Query: 484 MISGYGLHGHGLEALQLFSEM-LHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHD 542
           MISGY  HG G EAL+LF+ M L     P  VTF+ VL ACSHAGL+ EG + F+SM   
Sbjct: 411 MISGYARHGQGEEALKLFANMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDS 470

Query: 543 HGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIH--KDTNLA 600
           +G  P  EH++CM D+LGRAG+L+K  +FI  + V+P   +W  +LGAC     +   L 
Sbjct: 471 YGLAPRIEHFSCMADLLGRAGELDKLEDFIDKMPVKPNVLIWRTVLGACCRANGRKAELG 530

Query: 601 RVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGT 660
           + A+E LF+L+PEN   +VLL N+Y+A   +      R+ +K   + K  G + + +   
Sbjct: 531 KKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWVTMKDG 590

Query: 661 PHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKL 720
            H+F +GD+ HP +  IY  L++LN KMR+AG+  +T  AL+D+E+E KE ++  HSEKL
Sbjct: 591 VHMFVAGDKSHPDTDVIYKKLKELNRKMRDAGYVPQTGFALYDLEQENKEEILSYHSEKL 650

Query: 721 AIAFGLIATEPGT-EIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFH 771
           A+AF L A    T  IRI+KNLRVC DCH+A K+ISK+ GR I++RD+NR+ 
Sbjct: 651 AVAFVLAAQRSSTLPIRIMKNLRVCGDCHSAFKYISKIEGRQIILRDSNRYE 702



 Score =  158 bits (400), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 132/495 (26%), Positives = 235/495 (47%), Gaps = 19/495 (3%)

Query: 5   TPQSRNLFLSLLKGAKTQSQL-----TQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATC- 58
           +P+S  + LS         Q+      + H  +I  G    +  +  + + L +  A C 
Sbjct: 27  SPESYVILLSSFPEYSLAEQVGLKKGREVHGHVITTGL---VDFMVGIGNGLVNMYAKCG 83

Query: 59  ---YARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVL 115
               AR +F  + + D   +N +I G   N     ++  Y  +R++  L P +FT    L
Sbjct: 84  SIADARRVFCFMMEKDSVSWNSMITGLDQNGCFIEAVERYQSMRRHEIL-PGSFTLISSL 142

Query: 116 SAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTV 175
           S+ ++     +G  +HG ++  G   ++ V  AL+ LY +  ++   RK+F  MPE D V
Sbjct: 143 SSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQV 202

Query: 176 LWNSMISGLMKN-CCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQC 234
            WNS+I  L  +     +++  F + +R  G  L+  + ++VL AV+ +    LG +I  
Sbjct: 203 SWNSIIGALASSERSLPEAVACFLNALR-AGQKLNRITFSSVLSAVSSLSFGELGKQIHG 261

Query: 235 LGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLF-RDIVRPDLISCNAMISGYTCNGKTE 293
           L LK    D       L++ Y KCGE++  E +F R   R D ++ N+MISGY  N    
Sbjct: 262 LALKYNIADEATTENALIACYGKCGEMDGCEKIFSRMSERRDDVTWNSMISGYIHNELLA 321

Query: 294 SSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALS 353
            +L L   +L + +R++S     ++  F     L     +H+  +++ + S+  V +AL 
Sbjct: 322 KALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALV 381

Query: 354 TVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQAS-KVAPNP 412
            +YS+   ++ A + F+    ++  SWN+MI+GY ++G  EEA+ LF  M+   +  P+ 
Sbjct: 382 DMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFANMKLDGQTPPDH 441

Query: 413 VTVSSILSACAQLGAISLG-KWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFD 471
           VT   +LSAC+  G +  G K    +  S      I   + + D+  + G + +  +  D
Sbjct: 442 VTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADLLGRAGELDKLEDFID 501

Query: 472 LMSHKSEV-TWNTMI 485
            M  K  V  W T++
Sbjct: 502 KMPVKPNVLIWRTVL 516


>gi|225446691|ref|XP_002277494.1| PREDICTED: pentatricopeptide repeat-containing protein At2g41080
           [Vitis vinifera]
          Length = 657

 Score =  416 bits (1070), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 215/610 (35%), Positives = 347/610 (56%), Gaps = 33/610 (5%)

Query: 207 WLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAEL 266
           W + +  + +L +      L LG ++  L +  G     ++   L++ YSKCG+++ A  
Sbjct: 49  WSEPSLFSHLLQSCISENSLSLGKQLHSLIITSGCSSDKFISNHLLNLYSKCGQLDTAIT 108

Query: 267 LFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLI-------- 318
           LF  + R +++SCN +I+GY  +G   ++ ++F ++        ++ + GLI        
Sbjct: 109 LFGVMPRKNIMSCNILINGYFRSGDWVTARKMFDEMPERNVATWNAMVAGLIQFEFNEEG 168

Query: 319 -------------PVFYPFGHLHLTNC-----------IHSFCLKSGIVSNSSVLTALST 354
                        P  +  G + L  C           +H +  K G   N  V+++L+ 
Sbjct: 169 LGLFSRMNELGFLPDEFALGSV-LRGCAGLRALVAGRQVHGYVRKCGFEFNLVVVSSLAH 227

Query: 355 VYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVT 414
           +Y +   +    +L      +++ +WN +IAG  QNG  EE +  +  M+ +   P+ +T
Sbjct: 228 MYMKCGSLGEGERLIRAMPSQNVVAWNTLIAGRAQNGYPEEVLDQYNMMKMAGFRPDKIT 287

Query: 415 VSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMS 474
             S++S+C++L  +  G+ +H  V        + V ++LI MY++CG +  + ++F    
Sbjct: 288 FVSVISSCSELATLGQGQQIHAEVIKAGASLIVSVISSLISMYSRCGCLEYSLKVFLECE 347

Query: 475 HKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDE 534
           +   V W++MI+ YG HG G+EA+ LF++M    +  + VTFLS+LYACSH GL  +G +
Sbjct: 348 NGDVVCWSSMIAAYGFHGRGVEAIDLFNQMEQEKLEANDVTFLSLLYACSHCGLKEKGIK 407

Query: 535 IFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIH 594
            F  M+  +G KP  EHY CMVD+LGR G +E+A   I+ + V+     W  LL AC IH
Sbjct: 408 FFDLMVEKYGVKPRLEHYTCMVDLLGRYGSVEEAEALIRSMPVKADVITWKTLLSACKIH 467

Query: 595 KDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTL 654
           K T +AR  SE++F LDP +   +VLLSNI+++++ +   + VR+ ++ RKL K PG + 
Sbjct: 468 KKTEMARRISEEVFRLDPRDPVPYVLLSNIHASDKRWDDVSDVRKAMRDRKLKKEPGISW 527

Query: 655 IEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMK 714
           +EV    H F  GD+ HP+S  I + L +L  +M++ G+  +  + LHD++ E+KE  + 
Sbjct: 528 LEVKNQIHQFCMGDKSHPKSVEIASYLRELTSEMKKRGYVPDIDSVLHDMDVEDKEYSLV 587

Query: 715 VHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFK 774
            HSEKLAIAF L+ T  GT IR+IKNLRVC DCH A K+IS+++ R I+VRD++RFHHFK
Sbjct: 588 HHSEKLAIAFALLYTPVGTPIRVIKNLRVCSDCHVAIKYISEISNREIIVRDSSRFHHFK 647

Query: 775 GGVCSCGDYW 784
            G CSCGDYW
Sbjct: 648 NGRCSCGDYW 657



 Score =  159 bits (402), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 121/433 (27%), Positives = 204/433 (47%), Gaps = 37/433 (8%)

Query: 125 SIGVLLHGHAIVSGYGSDLFVGAALVDLYFKF---------------------------- 156
           S+G  LH   I SG  SD F+   L++LY K                             
Sbjct: 69  SLGKQLHSLIITSGCSSDKFISNHLLNLYSKCGQLDTAITLFGVMPRKNIMSCNILINGY 128

Query: 157 ----SWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTS 212
                WV +ARK+FD+MPE++   WN+M++GL++    ++ + +F  M    G   D  +
Sbjct: 129 FRSGDWV-TARKMFDEMPERNVATWNAMVAGLIQFEFNEEGLGLFSRM-NELGFLPDEFA 186

Query: 213 VAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIV 272
           + +VL   A ++ L  G ++     K GF  ++ V++ L   Y KCG +   E L R + 
Sbjct: 187 LGSVLRGCAGLRALVAGRQVHGYVRKCGFEFNLVVVSSLAHMYMKCGSLGEGERLIRAMP 246

Query: 273 RPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNC 332
             ++++ N +I+G   NG  E  L  +  +  +  R +  T V +I        L     
Sbjct: 247 SQNVVAWNTLIAGRAQNGYPEEVLDQYNMMKMAGFRPDKITFVSVISSCSELATLGQGQQ 306

Query: 333 IHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGL 392
           IH+  +K+G     SV+++L ++YSR   +E + K+F E     +  W++MIA Y  +G 
Sbjct: 307 IHAEVIKAGASLIVSVISSLISMYSRCGCLEYSLKVFLECENGDVVCWSSMIAAYGFHGR 366

Query: 393 TEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLG-KWVHELVKSRNFESNIYVST 451
             EAI LF +M+  K+  N VT  S+L AC+  G    G K+   +V+    +  +   T
Sbjct: 367 GVEAIDLFNQMEQEKLEANDVTFLSLLYACSHCGLKEKGIKFFDLMVEKYGVKPRLEHYT 426

Query: 452 ALIDMYAKCGNIVEARELFDLMSHKSEV-TWNTMISGYGLHGHGLEALQLFSEMLHSGIR 510
            ++D+  + G++ EA  L   M  K++V TW T++S   +H     A ++  E+     R
Sbjct: 427 CMVDLLGRYGSVEEAEALIRSMPVKADVITWKTLLSACKIHKKTEMARRISEEVFRLDPR 486

Query: 511 -PSGVTFLSVLYA 522
            P     LS ++A
Sbjct: 487 DPVPYVLLSNIHA 499



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 86/384 (22%), Positives = 163/384 (42%), Gaps = 45/384 (11%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           AR +F  +P+ ++  +N ++ G    E  +  +  ++ + +     PD F    VL   +
Sbjct: 137 ARKMFDEMPERNVATWNAMVAGLIQFEFNEEGLGLFSRMNE-LGFLPDEFALGSVLRGCA 195

Query: 120 ACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNS 179
                  G  +HG+    G+  +L V ++L  +Y K   +    ++   MP ++ V WN+
Sbjct: 196 GLRALVAGRQVHGYVRKCGFEFNLVVVSSLAHMYMKCGSLGEGERLIRAMPSQNVVAWNT 255

Query: 180 MISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKL 239
           +I+G  +N  + + +    +M++  G   D  +  +V+ + +E+  L  G +I    +K 
Sbjct: 256 LIAGRAQN-GYPEEVLDQYNMMKMAGFRPDKITFVSVISSCSELATLGQGQQIHAEVIKA 314

Query: 240 GFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLF 299
           G    V V++ L+S YS+CG +E +  +F +    D++  ++MI+ Y  +G+   ++ LF
Sbjct: 315 GASLIVSVISSLISMYSRCGCLEYSLKVFLECENGDVVCWSSMIAAYGFHGRGVEAIDLF 374

Query: 300 RQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRL 359
            Q+       N  T + L           L  C H    + GI                 
Sbjct: 375 NQMEQEKLEANDVTFLSL-----------LYACSHCGLKEKGI----------------- 406

Query: 360 NEMEAARKLFDESSEK-----SLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVT 414
                  K FD   EK      L  +  M+    + G  EEA +L + M    V  + +T
Sbjct: 407 -------KFFDLMVEKYGVKPRLEHYTCMVDLLGRYGSVEEAEALIRSM---PVKADVIT 456

Query: 415 VSSILSACAQLGAISLGKWVHELV 438
             ++LSAC       + + + E V
Sbjct: 457 WKTLLSACKIHKKTEMARRISEEV 480



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 72/295 (24%), Positives = 133/295 (45%), Gaps = 7/295 (2%)

Query: 14  SLLKGAKTQSQLT---QTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKP 70
           S+L+G      L    Q H  +   GF+ +L  V+ LAH      +      L  ++P  
Sbjct: 189 SVLRGCAGLRALVAGRQVHGYVRKCGFEFNLVVVSSLAHMYMKCGSLGEGERLIRAMPSQ 248

Query: 71  DLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLL 130
           ++  +N +I G + N  P+  +  Y ++ K     PD  T+  V+S+ S       G  +
Sbjct: 249 NVVAWNTLIAGRAQNGYPEEVLDQY-NMMKMAGFRPDKITFVSVISSCSELATLGQGQQI 307

Query: 131 HGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCF 190
           H   I +G    + V ++L+ +Y +   ++ + KVF +    D V W+SMI+    +   
Sbjct: 308 HAEVIKAGASLIVSVISSLISMYSRCGCLEYSLKVFLECENGDVVCWSSMIAAYGFHGRG 367

Query: 191 QDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGL-KLGFHDHVYVLT 249
            ++I +F  M +      D T + ++L A +       G++   L + K G    +   T
Sbjct: 368 VEAIDLFNQMEQEKLEANDVTFL-SLLYACSHCGLKEKGIKFFDLMVEKYGVKPRLEHYT 426

Query: 250 GLVSFYSKCGEVERAELLFRDI-VRPDLISCNAMISGYTCNGKTESSLRLFRQLL 303
            +V    + G VE AE L R + V+ D+I+   ++S    + KTE + R+  ++ 
Sbjct: 427 CMVDLLGRYGSVEEAEALIRSMPVKADVITWKTLLSACKIHKKTEMARRISEEVF 481



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 44/155 (28%), Positives = 67/155 (43%), Gaps = 33/155 (21%)

Query: 405 ASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNI- 463
           +S +   P   S +L +C    ++SLGK +H L+ +    S+ ++S  L+++Y+KCG + 
Sbjct: 45  SSHIWSEPSLFSHLLQSCISENSLSLGKQLHSLIITSGCSSDKFISNHLLNLYSKCGQLD 104

Query: 464 ------------------------------VEARELFDLMSHKSEVTWNTMISGYGLHGH 493
                                         V AR++FD M  ++  TWN M++G      
Sbjct: 105 TAITLFGVMPRKNIMSCNILINGYFRSGDWVTARKMFDEMPERNVATWNAMVAGLIQFEF 164

Query: 494 GLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGL 528
             E L LFS M   G  P      SVL  C  AGL
Sbjct: 165 NEEGLGLFSRMNELGFLPDEFALGSVLRGC--AGL 197


>gi|356503988|ref|XP_003520781.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Glycine max]
          Length = 771

 Score =  416 bits (1070), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 240/663 (36%), Positives = 368/663 (55%), Gaps = 18/663 (2%)

Query: 130 LHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDT--VLWNSMISGLMK- 186
           +H   + +   + L     L+ LY K   +     +F+  P   T  V W ++I+ L + 
Sbjct: 119 IHSQLVTTNNHASLANINTLLLLYAKCGSIHHTLLLFNTYPHPSTNVVTWTTLINQLSRS 178

Query: 187 NCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVY 246
           N  FQ     F + +R  G + +  + +A+LPA A    L  G +I  L  K  F +  +
Sbjct: 179 NKPFQ--ALTFFNRMRTTGIYPNHFTFSAILPACAHAALLSEGQQIHALIHKHCFLNDPF 236

Query: 247 VLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLA-S 305
           V T L+  Y+KCG +  AE +F ++   +L+S N+MI G+  N     ++ +FR++L+  
Sbjct: 237 VATALLDMYAKCGSMLLAENVFDEMPHRNLVSWNSMIVGFVKNKLYGRAIGVFREVLSLG 296

Query: 306 AERVNSSTIV----GLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNE 361
            ++V+ S+++    GL+        L     +H   +K G+V    V  +L  +Y +   
Sbjct: 297 PDQVSISSVLSACAGLV-------ELDFGKQVHGSIVKRGLVGLVYVKNSLVDMYCKCGL 349

Query: 362 MEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSA 421
            E A KLF    ++ + +WN MI G  +    E+A + FQ M    V P+  + SS+  A
Sbjct: 350 FEDATKLFCGGGDRDVVTWNVMIMGCFRCRNFEQACTYFQAMIREGVEPDEASYSSLFHA 409

Query: 422 CAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTW 481
            A + A++ G  +H  V       N  +S++L+ MY KCG++++A ++F      + V W
Sbjct: 410 SASIAALTQGTMIHSHVLKTGHVKNSRISSSLVTMYGKCGSMLDAYQVFRETKEHNVVCW 469

Query: 482 NTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIH 541
             MI+ +  HG   EA++LF EML+ G+ P  +TF+SVL ACSH G + +G + F SM +
Sbjct: 470 TAMITVFHQHGCANEAIKLFEEMLNEGVVPEYITFVSVLSACSHTGKIDDGFKYFNSMAN 529

Query: 542 DHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLAR 601
            H  KP  EHYACMVD+LGR G+LE+A  FI+ +  EP   VWGALLGAC  H +  + R
Sbjct: 530 VHNIKPGLEHYACMVDLLGRVGRLEEACRFIESMPFEPDSLVWGALLGACGKHANVEMGR 589

Query: 602 VASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTP 661
             +E+LF+L+P+N G ++LLSNIY       +A  VR+++    + K  GC+ I+V    
Sbjct: 590 EVAERLFKLEPDNPGNYMLLSNIYIRHGMLEEADEVRRLMGINGVRKESGCSWIDVKNRT 649

Query: 662 HVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLA 721
            VF + D+ H ++  IY ML+KL   ++  G+  ET  A + VE  E++ +   HSEKLA
Sbjct: 650 FVFNANDRSHSRTQEIYGMLQKLKELIKRRGYVAETQFATNSVEGSEEQSLW-CHSEKLA 708

Query: 722 IAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCG 781
           +AFGL+   PG+ +RI KNLR C DCHT  KF S++  R I+VRD NRFH F  G CSC 
Sbjct: 709 LAFGLLVLPPGSPVRIKKNLRTCGDCHTVMKFASEIFQREIIVRDINRFHRFTNGSCSCM 768

Query: 782 DYW 784
           DYW
Sbjct: 769 DYW 771



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 150/532 (28%), Positives = 251/532 (47%), Gaps = 25/532 (4%)

Query: 20  KTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKP--DLFLFNV 77
           K+    TQ H+Q++       L+ +  L    +   +  +   LF + P P  ++  +  
Sbjct: 111 KSLKHATQIHSQLVTTNNHASLANINTLLLLYAKCGSIHHTLLLFNTYPHPSTNVVTWTT 170

Query: 78  IIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACC----DRSIGVLLHGH 133
           +I   S +  P  ++ F+  +R  T + P++FT+S +L A +        + I  L+H H
Sbjct: 171 LINQLSRSNKPFQALTFFNRMR-TTGIYPNHFTFSAILPACAHAALLSEGQQIHALIHKH 229

Query: 134 AIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDS 193
             ++    D FV  AL+D+Y K   +  A  VFD+MP ++ V WNSMI G +KN  +  +
Sbjct: 230 CFLN----DPFVATALLDMYAKCGSMLLAENVFDEMPHRNLVSWNSMIVGFVKNKLYGRA 285

Query: 194 IWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVS 253
           I VF +++  G    D  S+++VL A A + EL  G ++    +K G    VYV   LV 
Sbjct: 286 IGVFREVLSLGP---DQVSISSVLSACAGLVELDFGKQVHGSIVKRGLVGLVYVKNSLVD 342

Query: 254 FYSKCGEVERAELLFRDIVRPDLISCNAMISG-YTCNGKTESSLRLFRQLLASAERVNSS 312
            Y KCG  E A  LF      D+++ N MI G + C    E +   F+ ++      + +
Sbjct: 343 MYCKCGLFEDATKLFCGGGDRDVVTWNVMIMGCFRCR-NFEQACTYFQAMIREGVEPDEA 401

Query: 313 TIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDES 372
           +   L         L     IHS  LK+G V NS + ++L T+Y +   M  A ++F E+
Sbjct: 402 SYSSLFHASASIAALTQGTMIHSHVLKTGHVKNSRISSSLVTMYGKCGSMLDAYQVFRET 461

Query: 373 SEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLG- 431
            E ++  W AMI  + Q+G   EAI LF+EM    V P  +T  S+LSAC+  G I  G 
Sbjct: 462 KEHNVVCWTAMITVFHQHGCANEAIKLFEEMLNEGVVPEYITFVSVLSACSHTGKIDDGF 521

Query: 432 KWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSE-VTWNTMISGYGL 490
           K+ + +    N +  +     ++D+  + G + EA    + M  + + + W  ++   G 
Sbjct: 522 KYFNSMANVHNIKPGLEHYACMVDLLGRVGRLEEACRFIESMPFEPDSLVWGALLGACGK 581

Query: 491 HGH---GLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSM 539
           H +   G E  +   ++      P     LS +Y     G++ E DE+ + M
Sbjct: 582 HANVEMGREVAERLFKL--EPDNPGNYMLLSNIYI--RHGMLEEADEVRRLM 629



 Score =  149 bits (375), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 112/415 (26%), Positives = 196/415 (47%), Gaps = 16/415 (3%)

Query: 216 VLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRP- 274
           +L   A+++ L+   +I    +    H  +  +  L+  Y+KCG +    LLF     P 
Sbjct: 103 LLNNAAKLKSLKHATQIHSQLVTTNNHASLANINTLLLLYAKCGSIHHTLLLFNTYPHPS 162

Query: 275 -DLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCI 333
            ++++   +I+  + + K   +L  F ++  +    N  T   ++P       L     I
Sbjct: 163 TNVVTWTTLINQLSRSNKPFQALTFFNRMRTTGIYPNHFTFSAILPACAHAALLSEGQQI 222

Query: 334 HSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLT 393
           H+   K   +++  V TAL  +Y++   M  A  +FDE   ++L SWN+MI G+ +N L 
Sbjct: 223 HALIHKHCFLNDPFVATALLDMYAKCGSMLLAENVFDEMPHRNLVSWNSMIVGFVKNKLY 282

Query: 394 EEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTAL 453
             AI +F+E+ +  + P+ V++SS+LSACA L  +  GK VH  +  R     +YV  +L
Sbjct: 283 GRAIGVFREVLS--LGPDQVSISSVLSACAGLVELDFGKQVHGSIVKRGLVGLVYVKNSL 340

Query: 454 IDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSG 513
           +DMY KCG   +A +LF     +  VTWN MI G     +  +A   F  M+  G+ P  
Sbjct: 341 VDMYCKCGLFEDATKLFCGGGDRDVVTWNVMIMGCFRCRNFEQACTYFQAMIREGVEPDE 400

Query: 514 VTFLSVLYACSHAGLVREGDEIFQSMIHDH----GFKPLAEHYACMVDILGRAGQLEKAL 569
            ++ S+ +A +    + +G     +MIH H    G    +   + +V + G+ G +  A 
Sbjct: 401 ASYSSLFHASASIAALTQG-----TMIHSHVLKTGHVKNSRISSSLVTMYGKCGSMLDAY 455

Query: 570 EFIKGLAVEPGPAVWGALLGACMIHKDTNLA-RVASEKLFE-LDPENVGYHVLLS 622
           +  +    E     W A++     H   N A ++  E L E + PE + +  +LS
Sbjct: 456 QVFRETK-EHNVVCWTAMITVFHQHGCANEAIKLFEEMLNEGVVPEYITFVSVLS 509


>gi|359495698|ref|XP_003635064.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59200, chloroplastic-like [Vitis vinifera]
          Length = 650

 Score =  416 bits (1070), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 223/607 (36%), Positives = 346/607 (57%), Gaps = 33/607 (5%)

Query: 208 LDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELL 267
           LD   + ++L     + ++   + I    ++ G     +++  L+   SKC  ++ A  +
Sbjct: 47  LDQKQIISLLQRSKHINQV---LPIHAQLIRNGHSQDPFMVFELLRSCSKCHAIDYASRI 103

Query: 268 FRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHL 327
           F+    P++    A+I G+  +G    +++L+ ++L  +   ++  +  ++        L
Sbjct: 104 FQYTHNPNVYLYTALIDGFVSSGNYFDAIQLYSRMLHDSILPDNYLMASILKACGSQLAL 163

Query: 328 HLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLAS-------- 379
                +HS  LK G+ SN  V   +  +Y +  E+  AR++F+E  E  +AS        
Sbjct: 164 REGREVHSRALKLGLSSNRLVRLRIMELYGKCGELGDARRVFEEMPEDVVASTVMISSYS 223

Query: 380 ----------------------WNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSS 417
                                 W AMI G+ +N     A+  F+ MQ   V PN  T+  
Sbjct: 224 DQGLVEEAGAVFSRVRRKDTVCWTAMIDGFVRNEEMNRALEAFRGMQGENVRPNEFTIVC 283

Query: 418 ILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKS 477
           +LSAC+QLGA+ +G+WVH  ++    E N++V  ALI+MY++CG+I EA+ +FD M  + 
Sbjct: 284 VLSACSQLGALEIGRWVHSYMRKFEIELNLFVGNALINMYSRCGSIDEAQTVFDEMKDRD 343

Query: 478 EVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQ 537
            +T+NTMISG  ++G   +A++LF  M+   +RP+ VTF+ VL ACSH GLV  G +IF 
Sbjct: 344 VITYNTMISGLSMNGKSRQAIELFRVMIGRRLRPTNVTFVGVLNACSHGGLVDFGFKIFH 403

Query: 538 SMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDT 597
           SM  D+G +P  EHY CMVD+LGR G+LE+A + I+ + + P   + G LL AC +HK+ 
Sbjct: 404 SMTRDYGVEPQIEHYGCMVDLLGRVGRLEEAYDLIRTMKMTPDHIMLGTLLSACKMHKNL 463

Query: 598 NLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEV 657
            L    ++ L +    + G +VLLS++Y++   + +AA VR  +K+  + K PGC+ IEV
Sbjct: 464 ELGEQVAKVLEDRGQADSGTYVLLSHVYASSGKWKEAAQVRAKMKEAGMQKEPGCSSIEV 523

Query: 658 GGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHS 717
               H F  GD  HP+   IY  LE+LN  +R  G+  E    L D+E+ EKE  + +HS
Sbjct: 524 NNEIHEFLLGDLRHPRKERIYEKLEELNRLLRLEGYHPEKEVVLQDIEDGEKEWALAIHS 583

Query: 718 EKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGV 777
           E+LAI +GLI+TEP T IR++KNLRVC DCH+A K I+K+T R +VVRD NRFH+F+ G 
Sbjct: 584 ERLAICYGLISTEPCTVIRVMKNLRVCYDCHSAIKLIAKITRRKVVVRDRNRFHYFENGA 643

Query: 778 CSCGDYW 784
           CSCGDYW
Sbjct: 644 CSCGDYW 650



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 123/499 (24%), Positives = 224/499 (44%), Gaps = 69/499 (13%)

Query: 2   SMKTPQSRNLFLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYAR 61
           S+K+   + + +SLL+ +K  +Q+   HAQ+I +G   D   V +L    S   A  YA 
Sbjct: 43  SLKSLDQKQI-ISLLQRSKHINQVLPIHAQLIRNGHSQDPFMVFELLRSCSKCHAIDYAS 101

Query: 62  ALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASAC 121
            +F     P+++L+  +I GF ++     +I  Y+ +  ++ L PDN+  + +L A  + 
Sbjct: 102 RIFQYTHNPNVYLYTALIDGFVSSGNYFDAIQLYSRMLHDSIL-PDNYLMASILKACGSQ 160

Query: 122 CDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPE---------- 171
                G  +H  A+  G  S+  V   +++LY K   +  AR+VF++MPE          
Sbjct: 161 LALREGREVHSRALKLGLSSNRLVRLRIMELYGKCGELGDARRVFEEMPEDVVASTVMIS 220

Query: 172 --------------------KDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDST 211
                               KDTV W +MI G ++N     ++  F  M +      +  
Sbjct: 221 SYSDQGLVEEAGAVFSRVRRKDTVCWTAMIDGFVRNEEMNRALEAFRGM-QGENVRPNEF 279

Query: 212 SVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDI 271
           ++  VL A +++  L +G  +     K     +++V   L++ YS+CG ++ A+ +F ++
Sbjct: 280 TIVCVLSACSQLGALEIGRWVHSYMRKFEIELNLFVGNALINMYSRCGSIDEAQTVFDEM 339

Query: 272 VRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTN 331
              D+I+ N MISG + NGK+  ++ LFR ++    R  + T VG+           L  
Sbjct: 340 KDRDVITYNTMISGLSMNGKSRQAIELFRVMIGRRLRPTNVTFVGV-----------LNA 388

Query: 332 CIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNG 391
           C H   +  G      +  +++  Y                 E  +  +  M+    + G
Sbjct: 389 CSHGGLVDFGF----KIFHSMTRDY---------------GVEPQIEHYGCMVDLLGRVG 429

Query: 392 LTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSR-NFESNIYVS 450
             EEA  L + M   K+ P+ + + ++LSAC     + LG+ V ++++ R   +S  YV 
Sbjct: 430 RLEEAYDLIRTM---KMTPDHIMLGTLLSACKMHKNLELGEQVAKVLEDRGQADSGTYV- 485

Query: 451 TALIDMYAKCGNIVEAREL 469
             L  +YA  G   EA ++
Sbjct: 486 -LLSHVYASSGKWKEAAQV 503


>gi|242051881|ref|XP_002455086.1| hypothetical protein SORBIDRAFT_03g004125 [Sorghum bicolor]
 gi|241927061|gb|EES00206.1| hypothetical protein SORBIDRAFT_03g004125 [Sorghum bicolor]
          Length = 627

 Score =  416 bits (1069), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 240/688 (34%), Positives = 365/688 (53%), Gaps = 86/688 (12%)

Query: 106 PDNFTYSFVLSA--------ASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFS 157
           PD +T+  +L A         SA   R++    H H +  G G +  V ++LV  Y    
Sbjct: 17  PDAYTFPALLKAVARAAGGSGSAAPARAV----HAHVVRLGMGRNAHVASSLVAAYTAGG 72

Query: 158 WVKSARKVFDKMPEKDT-VLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAV 216
              +AR +   + E DT V WN++ISG  +   F +S   F DM R G      T V+ +
Sbjct: 73  DGAAARAL---VGECDTPVAWNALISGHNRGGRFGESCGSFVDMARAGAAPTPVTYVSVL 129

Query: 217 LPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDL 276
                  +++ LGM++                          G V  + +L      PDL
Sbjct: 130 SACGKGTRDVLLGMQVH-------------------------GRVVGSGVL------PDL 158

Query: 277 ISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSF 336
              NA++  Y       S+ ++F  +   +                              
Sbjct: 159 RVENALVDMYAECADMGSAWKVFDGMQVRS------------------------------ 188

Query: 337 CLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEA 396
                +VS +S+L+ L+    RL +++ AR LFD   E+   SW AMI GY       EA
Sbjct: 189 -----VVSWTSLLSGLA----RLGQVDEARDLFDRMPERDTVSWTAMIDGYVWAARFREA 239

Query: 397 ISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDM 456
           + +F+EMQ S V+ +  T+ S+++ACAQLGA+ +G+WV   +  +  + + +V  ALIDM
Sbjct: 240 LEMFREMQYSNVSADEFTMVSVITACAQLGALEMGEWVRVYMSRQGIKMDAFVGNALIDM 299

Query: 457 YAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTF 516
           Y+KCG+I  A ++F  M H+ + TW  +I G  ++G+  EA+++F  M+     P  VTF
Sbjct: 300 YSKCGSIERALDVFKGMHHRDKFTWTAIILGLAVNGYEEEAIEMFHRMIRVSETPDEVTF 359

Query: 517 LSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLA 576
           + VL AC+HAGLV +G E F SMI  +   P   HY C++D+LGRAG++ +AL+ I  + 
Sbjct: 360 IGVLTACTHAGLVDKGREFFLSMIEAYNIAPNVVHYGCIIDLLGRAGKITEALDTIDQMP 419

Query: 577 VEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAAT 636
           + P   +WG LL AC +H ++ +  + +E+L ELDPEN   ++LLSNIY+    +     
Sbjct: 420 MTPNSTIWGTLLAACRVHGNSEIGELVAERLLELDPENSMVYILLSNIYAKCNRWEDVRR 479

Query: 637 VRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTE 696
           +R  + ++ + K PGC+LIE+ G  H F +GDQ HP S  IY+ LE +   +   G+  +
Sbjct: 480 LRHAIMEKGIKKEPGCSLIEMDGIIHEFVAGDQSHPMSKEIYSKLESIISDLNNVGYFPD 539

Query: 697 TVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISK 756
                 +V E+EK+ ++  HSEKLAIAF L++++P T IRI+KNLR+CLDCH A K IS+
Sbjct: 540 VTEVFVEVAEKEKKKVLYWHSEKLAIAFALLSSKPNTVIRIVKNLRMCLDCHNAIKLISR 599

Query: 757 VTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           + GR +VVRD  RFHHF+ G CSC DYW
Sbjct: 600 LYGREVVVRDRTRFHHFRHGFCSCKDYW 627



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 125/501 (24%), Positives = 204/501 (40%), Gaps = 85/501 (16%)

Query: 12  FLSLLK-------GAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALF 64
           F +LLK       G+ + +     HA ++  G   +    + L    +       ARAL 
Sbjct: 22  FPALLKAVARAAGGSGSAAPARAVHAHVVRLGMGRNAHVASSLVAAYTAGGDGAAARALV 81

Query: 65  FSIPKPDLFLFNVIIRGFSNN-EMPKSSICFYTHLRKNTALTPDNFTYSFVLSA-ASACC 122
                P    +N +I G +      +S   F    R   A TP   TY  VLSA      
Sbjct: 82  GECDTP--VAWNALISGHNRGGRFGESCGSFVDMARAGAAPTP--VTYVSVLSACGKGTR 137

Query: 123 DRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFK-------------------FSW----- 158
           D  +G+ +HG  + SG   DL V  ALVD+Y +                    SW     
Sbjct: 138 DVLLGMQVHGRVVGSGVLPDLRVENALVDMYAECADMGSAWKVFDGMQVRSVVSWTSLLS 197

Query: 159 -------VKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDST 211
                  V  AR +FD+MPE+DTV W +MI G +    F++++ +F +M +      D  
Sbjct: 198 GLARLGQVDEARDLFDRMPERDTVSWTAMIDGYVWAARFREALEMFREM-QYSNVSADEF 256

Query: 212 SVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDI 271
           ++ +V+ A A++  L +G  ++    + G     +V   L+  YSKCG +ERA  +F+ +
Sbjct: 257 TMVSVITACAQLGALEMGEWVRVYMSRQGIKMDAFVGNALIDMYSKCGSIERALDVFKGM 316

Query: 272 VRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTN 331
              D  +  A+I G   NG  E ++ +F +++  +E  +  T +G+           LT 
Sbjct: 317 HHRDKFTWTAIILGLAVNGYEEEAIEMFHRMIRVSETPDEVTFIGV-----------LTA 365

Query: 332 CIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNG 391
           C H+  +  G     S++ A +                      ++  +  +I    + G
Sbjct: 366 CTHAGLVDKGREFFLSMIEAYNIA-------------------PNVVHYGCIIDLLGRAG 406

Query: 392 LTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFE---SNIY 448
              EA+    +M    + PN     ++L+AC   G   +G    ELV  R  E    N  
Sbjct: 407 KITEALDTIDQM---PMTPNSTIWGTLLAACRVHGNSEIG----ELVAERLLELDPENSM 459

Query: 449 VSTALIDMYAKCGNIVEAREL 469
           V   L ++YAKC    + R L
Sbjct: 460 VYILLSNIYAKCNRWEDVRRL 480


>gi|356568485|ref|XP_003552441.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At3g23330-like [Glycine max]
          Length = 1011

 Score =  416 bits (1068), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 242/703 (34%), Positives = 370/703 (52%), Gaps = 50/703 (7%)

Query: 130  LHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCC 189
            LH   + +G    L     L+ LY K + +  A+K+FD++P+++T  W  +ISG  +   
Sbjct: 311  LHALYVKNGSLQTLNPANHLLTLYAKSNNMAHAQKLFDEIPQRNTQTWTILISGFARAGS 370

Query: 190  FQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLT 249
             +    +F +M   G    +  ++++VL   +    L+LG  +    L+ G    V +  
Sbjct: 371  SEMVFNLFREMQAKGAC-PNQYTLSSVLKCCSLDNNLQLGKGVHAWMLRNGIDVDVVLGN 429

Query: 250  GLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERV 309
             ++  Y KC   E AE LF  +   D++S N MI  Y   G  E SL +FR+L    + V
Sbjct: 430  SILDLYLKCKVFEYAERLFELMNEGDVVSWNIMIGAYLRAGDVEKSLDMFRRL-PYKDVV 488

Query: 310  NSSTIV-GLIPVFY-------------------------------PFGHLHLTNCIHSFC 337
            + +TIV GL+   Y                                  H+ L   +H   
Sbjct: 489  SWNTIVDGLLQCGYERHALEQLYCMVECGTEFSAVTFSIALILASSLSHVELGRQLHGMV 548

Query: 338  LKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDE----------------SSEKSLASWN 381
            LK G  S+  + ++L  +Y +   M+ A  +  +                  +  + SW 
Sbjct: 549  LKFGFDSDGFIRSSLVEMYCKCGRMDKASIILRDVPLDVLRKGNARVSYKEPKAGIVSWG 608

Query: 382  AMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSR 441
            +M++GY  NG  E+ +  F+ M    V  +  TV++I+SACA  G +  G+ VH  V+  
Sbjct: 609  SMVSGYVWNGKYEDGLKTFRLMVRELVVVDIRTVTTIISACANAGILEFGRHVHAYVQKI 668

Query: 442  NFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLF 501
                + YV ++LIDMY+K G++ +A  +F   +  + V W +MISGY LHG G+ A+ LF
Sbjct: 669  GHRIDAYVGSSLIDMYSKSGSLDDAWMVFRQSNEPNIVMWTSMISGYALHGQGMHAIGLF 728

Query: 502  SEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGR 561
             EML+ GI P+ VTFL VL ACSHAGL+ EG   F+ M   +   P  EH   MVD+ GR
Sbjct: 729  EEMLNQGIIPNEVTFLGVLNACSHAGLIEEGCRYFRMMKDAYCINPGVEHCTSMVDLYGR 788

Query: 562  AGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLL 621
            AG L K   FI    +    +VW + L +C +HK+  + +  SE L ++ P + G +VLL
Sbjct: 789  AGHLTKTKNFIFKNGISHLTSVWKSFLSSCRLHKNVEMGKWVSEMLLQVAPSDPGAYVLL 848

Query: 622  SNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAML 681
            SN+ ++   + +AA VR ++ +R + K PG + I++    H F  GD+ HPQ   IY+ L
Sbjct: 849  SNMCASNHRWDEAARVRSLMHQRGVKKQPGQSWIQLKDQIHTFVMGDRSHPQDDEIYSYL 908

Query: 682  EKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNL 741
            + L G+++E G+  +    + DVEEE+ E+++  HSEKLA+ FG+I T   T IRIIKNL
Sbjct: 909  DILIGRLKEIGYSFDVKLVMQDVEEEQGEVLISHHSEKLAVVFGIINTANRTPIRIIKNL 968

Query: 742  RVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
            R+C DCH   K+ S++  R I+VRD +RFHHFK G CSCGDYW
Sbjct: 969  RICTDCHNFIKYASQLLDREIIVRDIHRFHHFKHGSCSCGDYW 1011



 Score =  172 bits (436), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 138/575 (24%), Positives = 259/575 (45%), Gaps = 61/575 (10%)

Query: 25  LTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSN 84
           L   HA  + +G    L+    L    +      +A+ LF  IP+ +   + ++I GF+ 
Sbjct: 308 LGTLHALYVKNGSLQTLNPANHLLTLYAKSNNMAHAQKLFDEIPQRNTQTWTILISGFAR 367

Query: 85  NEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLF 144
               +     +  ++   A  P+ +T S VL   S   +  +G  +H   + +G   D+ 
Sbjct: 368 AGSSEMVFNLFREMQAKGA-CPNQYTLSSVLKCCSLDNNLQLGKGVHAWMLRNGIDVDVV 426

Query: 145 VGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVF------- 197
           +G +++DLY K    + A ++F+ M E D V WN MI   ++    + S+ +F       
Sbjct: 427 LGNSILDLYLKCKVFEYAERLFELMNEGDVVSWNIMIGAYLRAGDVEKSLDMFRRLPYKD 486

Query: 198 ---GDMVRNG--------------------GTWLDSTSVAAVLPAVAEVQELRLGMEIQC 234
               + + +G                    GT   + + +  L   + +  + LG ++  
Sbjct: 487 VVSWNTIVDGLLQCGYERHALEQLYCMVECGTEFSAVTFSIALILASSLSHVELGRQLHG 546

Query: 235 LGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDI----------------VRPDLIS 278
           + LK GF    ++ + LV  Y KCG +++A ++ RD+                 +  ++S
Sbjct: 547 MVLKFGFDSDGFIRSSLVEMYCKCGRMDKASIILRDVPLDVLRKGNARVSYKEPKAGIVS 606

Query: 279 CNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCL 338
             +M+SGY  NGK E  L+ FR ++     V+  T+  +I      G L     +H++  
Sbjct: 607 WGSMVSGYVWNGKYEDGLKTFRLMVRELVVVDIRTVTTIISACANAGILEFGRHVHAYVQ 666

Query: 339 KSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAIS 398
           K G   ++ V ++L  +YS+   ++ A  +F +S+E ++  W +MI+GY  +G    AI 
Sbjct: 667 KIGHRIDAYVGSSLIDMYSKSGSLDDAWMVFRQSNEPNIVMWTSMISGYALHGQGMHAIG 726

Query: 399 LFQEMQASKVAPNPVTVSSILSACAQLGAISLG-KWVHELVKSRNFESNIYVSTALIDMY 457
           LF+EM    + PN VT   +L+AC+  G I  G ++   +  +      +   T+++D+Y
Sbjct: 727 LFEEMLNQGIIPNEVTFLGVLNACSHAGLIEEGCRYFRMMKDAYCINPGVEHCTSMVDLY 786

Query: 458 AKCGNIVEARELF--DLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLH--SGIRPSG 513
            + G++ + +     + +SH + V W + +S   LH + +E  +  SEML   +   P  
Sbjct: 787 GRAGHLTKTKNFIFKNGISHLTSV-WKSFLSSCRLHKN-VEMGKWVSEMLLQVAPSDPGA 844

Query: 514 VTFLSVLYACSHAGLVREGDEI--FQSMIHDHGFK 546
              LS + A +H       DE    +S++H  G K
Sbjct: 845 YVLLSNMCASNH-----RWDEAARVRSLMHQRGVK 874


>gi|449500413|ref|XP_004161091.1| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
           mitochondrial-like [Cucumis sativus]
          Length = 610

 Score =  416 bits (1068), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 224/574 (39%), Positives = 327/574 (56%), Gaps = 7/574 (1%)

Query: 213 VAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIV 272
           V+A+L AV     +    EI     K   +   ++   LV+ Y+K G  E A  LF D+ 
Sbjct: 42  VSALLIAVNSCPSISNCREIHARVFKSLLYRDGFIGDQLVTCYNKLGYAEDALKLFDDMP 101

Query: 273 RPDLISCNAMISGYT-CNGKTESSLRLFRQL-LASAERVNSSTIVGLIPVFYPFGHLHLT 330
             DL+S N++ISG++ C      SL  F  +    + + N  TI+ +I      G L   
Sbjct: 102 HKDLVSWNSLISGFSRC---LHMSLTAFYTMKFEMSVKPNEVTILSMISACN--GALDAG 156

Query: 331 NCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQN 390
             IH F +K G      V  +L  +Y +  ++ +A +LF+   + +  SWN++IA    N
Sbjct: 157 KYIHGFGIKVGGTLEVKVANSLINMYGKSGDLTSACRLFEAIPDPNTVSWNSIIAAQVTN 216

Query: 391 GLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVS 450
           G   E I  F +M+   +  +  T+ ++L AC  LG   L + +H L+    F + I ++
Sbjct: 217 GCAREGIDYFNKMRRLGIEQDEGTILALLQACLHLGVGKLAESIHGLMFCTGFGAKITIA 276

Query: 451 TALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIR 510
           TAL+D YAK G +  +  +F  +     V W  M++GY  HG G EA++LF  M + G+ 
Sbjct: 277 TALLDTYAKLGRLSASYGVFTEVGFADRVAWTAMLAGYAAHGLGREAIKLFESMANKGLE 336

Query: 511 PSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALE 570
           P  VTF  +L ACSH+GLV EG   F  M   +G +P  +HY+CMVD+LGR G L  A E
Sbjct: 337 PDHVTFTHLLSACSHSGLVNEGKSYFNVMSEVYGIEPRVDHYSCMVDLLGRCGLLNDAYE 396

Query: 571 FIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERD 630
            I+ + +EP   VWGALLGAC +H +  L +  +E L  ++P +   +++LSN+YSA R 
Sbjct: 397 VIQNMPMEPNAGVWGALLGACRVHGNIELGKEVAEHLINMEPLDPRNYIMLSNMYSASRS 456

Query: 631 YLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMRE 690
           +  AA VR ++K+R L + PG + IE G   H F  GD+ HP++  IY+ LE+L GK+R+
Sbjct: 457 WKDAAKVRALLKERGLKRTPGYSSIEYGNKNHHFFVGDRSHPETEKIYSKLEELLGKIRK 516

Query: 691 AGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTA 750
           AG+ ++T   L DVEEE KE M+  HSEKLAIAFGL+ ++ G  + I KNLR+C DCH+ 
Sbjct: 517 AGYSSKTEYVLQDVEEEVKEDMINKHSEKLAIAFGLLVSKEGEALIITKNLRICGDCHST 576

Query: 751 TKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
            K IS +  R I++RD  RFHHF  G CSC DYW
Sbjct: 577 AKLISLIEKRTIIIRDPKRFHHFSDGFCSCADYW 610



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 120/435 (27%), Positives = 199/435 (45%), Gaps = 13/435 (2%)

Query: 97  HLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKF 156
           HL +  A TP+    S +L A ++C   S    +H     S    D F+G  LV  Y K 
Sbjct: 30  HLVRQCA-TPEAIV-SALLIAVNSCPSISNCREIHARVFKSLLYRDGFIGDQLVTCYNKL 87

Query: 157 SWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAV 216
            + + A K+FD MP KD V WNS+ISG  +  C   S+  F  M        +  ++ ++
Sbjct: 88  GYAEDALKLFDDMPHKDLVSWNSLISGFSR--CLHMSLTAFYTMKFEMSVKPNEVTILSM 145

Query: 217 LPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDL 276
           + A      L  G  I   G+K+G    V V   L++ Y K G++  A  LF  I  P+ 
Sbjct: 146 ISACNGA--LDAGKYIHGFGIKVGGTLEVKVANSLINMYGKSGDLTSACRLFEAIPDPNT 203

Query: 277 ISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSF 336
           +S N++I+    NG     +  F ++       +  TI+ L+      G   L   IH  
Sbjct: 204 VSWNSIIAAQVTNGCAREGIDYFNKMRRLGIEQDEGTILALLQACLHLGVGKLAESIHGL 263

Query: 337 CLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEA 396
              +G  +  ++ TAL   Y++L  + A+  +F E       +W AM+AGY  +GL  EA
Sbjct: 264 MFCTGFGAKITIATALLDTYAKLGRLSASYGVFTEVGFADRVAWTAMLAGYAAHGLGREA 323

Query: 397 ISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGK-WVHELVKSRNFESNIYVSTALID 455
           I LF+ M    + P+ VT + +LSAC+  G ++ GK + + + +    E  +   + ++D
Sbjct: 324 IKLFESMANKGLEPDHVTFTHLLSACSHSGLVNEGKSYFNVMSEVYGIEPRVDHYSCMVD 383

Query: 456 MYAKCGNIVEARELFDLMSHKSEV-TWNTMISGYGLHGH---GLEALQLFSEMLHSGIRP 511
           +  +CG + +A E+   M  +     W  ++    +HG+   G E  +    M    + P
Sbjct: 384 LLGRCGLLNDAYEVIQNMPMEPNAGVWGALLGACRVHGNIELGKEVAEHLINM--EPLDP 441

Query: 512 SGVTFLSVLYACSHA 526
                LS +Y+ S +
Sbjct: 442 RNYIMLSNMYSASRS 456



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 40/155 (25%), Positives = 73/155 (47%), Gaps = 10/155 (6%)

Query: 53  DFKATCYARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYS 112
           D  + C    LF +IP P+   +N II     N   +  I ++  +R+   +  D  T  
Sbjct: 187 DLTSAC---RLFEAIPDPNTVSWNSIIAAQVTNGCAREGIDYFNKMRR-LGIEQDEGT-- 240

Query: 113 FVLSAASACCDRSIGVL---LHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKM 169
            +L+   AC    +G L   +HG    +G+G+ + +  AL+D Y K   + ++  VF ++
Sbjct: 241 -ILALLQACLHLGVGKLAESIHGLMFCTGFGAKITIATALLDTYAKLGRLSASYGVFTEV 299

Query: 170 PEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNG 204
              D V W +M++G   +   +++I +F  M   G
Sbjct: 300 GFADRVAWTAMLAGYAAHGLGREAIKLFESMANKG 334


>gi|147864534|emb|CAN78385.1| hypothetical protein VITISV_017238 [Vitis vinifera]
          Length = 643

 Score =  415 bits (1067), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 222/562 (39%), Positives = 333/562 (59%), Gaps = 9/562 (1%)

Query: 216 VLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPD 275
           V+ A  E      G+ +    +K GF    Y++  L+  Y+   ++  A+ LF      D
Sbjct: 6   VIKACNESSVTWFGLLVHTHVVKSGFECDSYIVNSLIHLYANGKDLGAAKQLFSLCSDRD 65

Query: 276 LISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHS 335
           ++S NAMI GY   G+   +  +F +++   + ++ +TI+    +    G +     +  
Sbjct: 66  VVSWNAMIDGYVKRGEMGHTRMVFDRMVCR-DVISWNTIINGYAIV---GKIDEAKRLFD 121

Query: 336 FCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEE 395
              +  +VS +S+L+     + +   +E A  LF E   + + SWN+M+A Y Q G   E
Sbjct: 122 EMPERNLVSWNSMLSG----FVKCGNVEEAFGLFSEMPCRDVVSWNSMLACYAQCGKPNE 177

Query: 396 AISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALID 455
           A++LF +M+A  V P   TV S+LSACA LGA+  G  +H  +     E N  V TAL+D
Sbjct: 178 ALALFDQMRAVGVKPTEATVVSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVGTALVD 237

Query: 456 MYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVT 515
           MYAKCG I  A ++F+ M  K  + WNT+I+G  +HGH  EA QLF EM  + + P+ +T
Sbjct: 238 MYAKCGKISLATQVFNAMESKDVLAWNTIIAGMAIHGHVKEAQQLFKEMKEASVEPNDIT 297

Query: 516 FLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGL 575
           F+++L ACSHAG+V EG ++   M   +G +P  EHY C++D+L RAG LE+A+E I  +
Sbjct: 298 FVAMLSACSHAGMVDEGQKLLDCMSSSYGIEPKVEHYDCVIDLLARAGLLEEAMELIGTM 357

Query: 576 AVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAA 635
            +EP P+  GALLG C IH +  L  +  ++L  L P + G ++LLSNIY+A + +  A 
Sbjct: 358 PMEPNPSALGALLGGCRIHGNFELGEMVGKRLINLQPCHSGRYILLSNIYAAAKKWDDAR 417

Query: 636 TVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREA-GFQ 694
            VR ++K   ++K PG ++IE+ G  H F +GD  HP+S  IY  L +++ +++ A G+ 
Sbjct: 418 KVRNLMKVNGISKVPGVSVIELKGMVHRFVAGDWSHPESNKIYDKLNEIHTRLKSAIGYS 477

Query: 695 TETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFI 754
            +T   L D+EEE+KE  + VHSEKLAIA+GL+  +    IRI+KNLRVC DCH  TK I
Sbjct: 478 ADTGNVLLDMEEEDKEHALAVHSEKLAIAYGLLHLDSKEAIRIVKNLRVCRDCHHVTKLI 537

Query: 755 SKVTGRVIVVRDANRFHHFKGG 776
           SKV GR I+VRD NRFHHF+ G
Sbjct: 538 SKVYGREIIVRDRNRFHHFEDG 559



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 111/388 (28%), Positives = 193/388 (49%), Gaps = 13/388 (3%)

Query: 109 FTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDK 168
            TY FV+ A +       G+L+H H + SG+  D ++  +L+ LY     + +A+++F  
Sbjct: 1   MTYPFVIKACNESSVTWFGLLVHTHVVKSGFECDSYIVNSLIHLYANGKDLGAAKQLFSL 60

Query: 169 MPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMV-RNGGTWLDSTSVAAVLPAVAEVQELR 227
             ++D V WN+MI G +K      +  VF  MV R+  +W    +  A++  + E + L 
Sbjct: 61  CSDRDVVSWNAMIDGYVKRGEMGHTRMVFDRMVCRDVISWNTIINGYAIVGKIDEAKRLF 120

Query: 228 LGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYT 287
             M  + L               ++S + KCG VE A  LF ++   D++S N+M++ Y 
Sbjct: 121 DEMPERNL----------VSWNSMLSGFVKCGNVEEAFGLFSEMPCRDVVSWNSMLACYA 170

Query: 288 CNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSS 347
             GK   +L LF Q+ A   +   +T+V L+      G L     +H++   + I  NS 
Sbjct: 171 QCGKPNEALALFDQMRAVGVKPTEATVVSLLSACAHLGALDKGLHLHTYINDNRIEVNSI 230

Query: 348 VLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASK 407
           V TAL  +Y++  ++  A ++F+    K + +WN +IAG   +G  +EA  LF+EM+ + 
Sbjct: 231 VGTALVDMYAKCGKISLATQVFNAMESKDVLAWNTIIAGMAIHGHVKEAQQLFKEMKEAS 290

Query: 408 VAPNPVTVSSILSACAQLGAISLG-KWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEA 466
           V PN +T  ++LSAC+  G +  G K +  +  S   E  +     +ID+ A+ G + EA
Sbjct: 291 VEPNDITFVAMLSACSHAGMVDEGQKLLDCMSSSYGIEPKVEHYDCVIDLLARAGLLEEA 350

Query: 467 RELFDLMSHKSEVT-WNTMISGYGLHGH 493
            EL   M  +   +    ++ G  +HG+
Sbjct: 351 MELIGTMPMEPNPSALGALLGGCRIHGN 378



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 54/246 (21%), Positives = 112/246 (45%), Gaps = 4/246 (1%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           A  LF  +P  D+  +N ++  ++    P  ++  +  +R    + P   T   +LSA +
Sbjct: 147 AFGLFSEMPCRDVVSWNSMLACYAQCGKPNEALALFDQMRA-VGVKPTEATVVSLLSACA 205

Query: 120 ACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNS 179
                  G+ LH +   +    +  VG ALVD+Y K   +  A +VF+ M  KD + WN+
Sbjct: 206 HLGALDKGLHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQVFNAMESKDVLAWNT 265

Query: 180 MISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGME-IQCLGLK 238
           +I+G+  +   +++  +F +M +      +  +  A+L A +    +  G + + C+   
Sbjct: 266 IIAGMAIHGHVKEAQQLFKEM-KEASVEPNDITFVAMLSACSHAGMVDEGQKLLDCMSSS 324

Query: 239 LGFHDHVYVLTGLVSFYSKCGEVERA-ELLFRDIVRPDLISCNAMISGYTCNGKTESSLR 297
            G    V     ++   ++ G +E A EL+    + P+  +  A++ G   +G  E    
Sbjct: 325 YGIEPKVEHYDCVIDLLARAGLLEEAMELIGTMPMEPNPSALGALLGGCRIHGNFELGEM 384

Query: 298 LFRQLL 303
           + ++L+
Sbjct: 385 VGKRLI 390



 Score = 56.6 bits (135), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 33/127 (25%), Positives = 59/127 (46%), Gaps = 4/127 (3%)

Query: 413 VTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDL 472
           +T   ++ AC +      G  VH  V    FE + Y+  +LI +YA   ++  A++LF L
Sbjct: 1   MTYPFVIKACNESSVTWFGLLVHTHVVKSGFECDSYIVNSLIHLYANGKDLGAAKQLFSL 60

Query: 473 MSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREG 532
            S +  V+WN MI GY   G       +F  M+   +    +++ +++   +  G + E 
Sbjct: 61  CSDRDVVSWNAMIDGYVKRGEMGHTRMVFDRMVCRDV----ISWNTIINGYAIVGKIDEA 116

Query: 533 DEIFQSM 539
             +F  M
Sbjct: 117 KRLFDEM 123


>gi|449450646|ref|XP_004143073.1| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
           mitochondrial-like [Cucumis sativus]
          Length = 610

 Score =  415 bits (1067), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 224/574 (39%), Positives = 327/574 (56%), Gaps = 7/574 (1%)

Query: 213 VAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIV 272
           V+A+L AV     +    EI     K   +   ++   LV+ Y+K G  E A  LF D+ 
Sbjct: 42  VSALLIAVNSCPSISNCREIHARVFKSLLYRDGFIGDQLVTCYNKLGYAEDALKLFDDMP 101

Query: 273 RPDLISCNAMISGYT-CNGKTESSLRLFRQL-LASAERVNSSTIVGLIPVFYPFGHLHLT 330
             DL+S N++ISG++ C      SL  F  +    + + N  TI+ +I      G L   
Sbjct: 102 HKDLVSWNSLISGFSRC---LHMSLTAFYTMKFEMSVKPNEVTILSMISACS--GALDAG 156

Query: 331 NCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQN 390
             IH F +K G      V  +L  +Y +  ++ +A +LF+   + +  SWN++IA    N
Sbjct: 157 KYIHGFGIKVGGTLEVKVANSLINMYGKSGDLTSACRLFEAIPDPNTVSWNSIIAAQVTN 216

Query: 391 GLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVS 450
           G   E I  F +M+   +  +  T+ ++L AC  LG   L + +H L+    F + I ++
Sbjct: 217 GCAREGIDYFNKMRRLGIEQDEGTILALLQACLHLGVGKLAESIHGLMFCTGFGAKITIA 276

Query: 451 TALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIR 510
           TAL+D YAK G +  +  +F  +     V W  M++GY  HG G EA++LF  M + G+ 
Sbjct: 277 TALLDTYAKLGRLSASYGVFTEVGFADRVAWTAMLAGYAAHGLGREAIKLFESMANKGLE 336

Query: 511 PSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALE 570
           P  VTF  +L ACSH+GLV EG   F  M   +G +P  +HY+CMVD+LGR G L  A E
Sbjct: 337 PDHVTFTHLLSACSHSGLVNEGKSYFNVMSEVYGIEPRVDHYSCMVDLLGRCGLLNDAYE 396

Query: 571 FIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERD 630
            I+ + +EP   VWGALLGAC +H +  L +  +E L  ++P +   +++LSN+YSA R 
Sbjct: 397 VIQNMPMEPNAGVWGALLGACRVHGNIELGKEVAEHLINMEPLDPRNYIMLSNMYSASRS 456

Query: 631 YLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMRE 690
           +  AA VR ++K+R L + PG + IE G   H F  GD+ HP++  IY+ LE+L GK+R+
Sbjct: 457 WKDAAKVRALLKERGLKRTPGYSSIEYGNKNHHFFVGDRSHPETEKIYSKLEELLGKIRK 516

Query: 691 AGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTA 750
           AG+ ++T   L DVEEE KE M+  HSEKLAIAFGL+ ++ G  + I KNLR+C DCH+ 
Sbjct: 517 AGYSSKTEYVLQDVEEEVKEDMINKHSEKLAIAFGLLVSKEGEALIITKNLRICGDCHST 576

Query: 751 TKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
            K IS +  R I++RD  RFHHF  G CSC DYW
Sbjct: 577 AKLISLIEKRTIIIRDPKRFHHFSDGFCSCADYW 610



 Score =  162 bits (409), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 120/435 (27%), Positives = 200/435 (45%), Gaps = 13/435 (2%)

Query: 97  HLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKF 156
           HL +  A TP+    S +L A ++C   S    +H     S    D F+G  LV  Y K 
Sbjct: 30  HLVRQCA-TPEAIV-SALLIAVNSCPSISNCREIHARVFKSLLYRDGFIGDQLVTCYNKL 87

Query: 157 SWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAV 216
            + + A K+FD MP KD V WNS+ISG  +  C   S+  F  M        +  ++ ++
Sbjct: 88  GYAEDALKLFDDMPHKDLVSWNSLISGFSR--CLHMSLTAFYTMKFEMSVKPNEVTILSM 145

Query: 217 LPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDL 276
           + A +    L  G  I   G+K+G    V V   L++ Y K G++  A  LF  I  P+ 
Sbjct: 146 ISACSGA--LDAGKYIHGFGIKVGGTLEVKVANSLINMYGKSGDLTSACRLFEAIPDPNT 203

Query: 277 ISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSF 336
           +S N++I+    NG     +  F ++       +  TI+ L+      G   L   IH  
Sbjct: 204 VSWNSIIAAQVTNGCAREGIDYFNKMRRLGIEQDEGTILALLQACLHLGVGKLAESIHGL 263

Query: 337 CLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEA 396
              +G  +  ++ TAL   Y++L  + A+  +F E       +W AM+AGY  +GL  EA
Sbjct: 264 MFCTGFGAKITIATALLDTYAKLGRLSASYGVFTEVGFADRVAWTAMLAGYAAHGLGREA 323

Query: 397 ISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGK-WVHELVKSRNFESNIYVSTALID 455
           I LF+ M    + P+ VT + +LSAC+  G ++ GK + + + +    E  +   + ++D
Sbjct: 324 IKLFESMANKGLEPDHVTFTHLLSACSHSGLVNEGKSYFNVMSEVYGIEPRVDHYSCMVD 383

Query: 456 MYAKCGNIVEARELFDLMSHKSEV-TWNTMISGYGLHGH---GLEALQLFSEMLHSGIRP 511
           +  +CG + +A E+   M  +     W  ++    +HG+   G E  +    M    + P
Sbjct: 384 LLGRCGLLNDAYEVIQNMPMEPNAGVWGALLGACRVHGNIELGKEVAEHLINM--EPLDP 441

Query: 512 SGVTFLSVLYACSHA 526
                LS +Y+ S +
Sbjct: 442 RNYIMLSNMYSASRS 456



 Score = 60.1 bits (144), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 40/155 (25%), Positives = 73/155 (47%), Gaps = 10/155 (6%)

Query: 53  DFKATCYARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYS 112
           D  + C    LF +IP P+   +N II     N   +  I ++  +R+   +  D  T  
Sbjct: 187 DLTSAC---RLFEAIPDPNTVSWNSIIAAQVTNGCAREGIDYFNKMRR-LGIEQDEGT-- 240

Query: 113 FVLSAASACCDRSIGVL---LHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKM 169
            +L+   AC    +G L   +HG    +G+G+ + +  AL+D Y K   + ++  VF ++
Sbjct: 241 -ILALLQACLHLGVGKLAESIHGLMFCTGFGAKITIATALLDTYAKLGRLSASYGVFTEV 299

Query: 170 PEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNG 204
              D V W +M++G   +   +++I +F  M   G
Sbjct: 300 GFADRVAWTAMLAGYAAHGLGREAIKLFESMANKG 334


>gi|297806459|ref|XP_002871113.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297316950|gb|EFH47372.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 637

 Score =  415 bits (1067), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 211/548 (38%), Positives = 326/548 (59%)

Query: 237 LKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSL 296
           +++     V +   L++ YSKCG VE A  +F  ++   L+S N MI  YT N     +L
Sbjct: 90  MRMELQGDVTLSNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEAL 149

Query: 297 RLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVY 356
            +F ++     + +  TI  ++              +H   +K+ +  N  V TAL  +Y
Sbjct: 150 DIFWEMRNEGFKFSEFTISSVLSACGANCDALECKKLHCLSMKTSLDLNLYVGTALLDLY 209

Query: 357 SRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVS 416
           ++   +  A ++F+   +KS  +W++M+AGY Q+   EEA+ L++  Q   +  N  T+S
Sbjct: 210 AKCGMINDAVQVFESMQDKSSVTWSSMVAGYVQSKNYEEALLLYRRAQRMSLEQNQFTLS 269

Query: 417 SILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHK 476
           S++ AC+ L A+  GK +H +++   F SN++V+++ +DMYAKCG++ E+  +F  +  K
Sbjct: 270 SVICACSNLAALIEGKQMHAVIRKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEK 329

Query: 477 SEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIF 536
           +   WNT+ISG+  H    E + LF +M   G+ P+ VTF S+L  C H GLV EG   F
Sbjct: 330 NIELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFF 389

Query: 537 QSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKD 596
           + M   +G  P   HY+CMVDILGRAG L +A E IK +  EP  ++WG+LL +C + K+
Sbjct: 390 KLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFEPTASIWGSLLASCRVCKN 449

Query: 597 TNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIE 656
             LA VA++KLFEL+PEN G HVLLSNIY+A + + + A  R++++   + K  G + I+
Sbjct: 450 LELAEVAAKKLFELEPENAGNHVLLSNIYAANKQWEEIAKSRKLLRDCDVKKVRGQSWID 509

Query: 657 VGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVH 716
           +    H+F  G+  HP+   I  ML+ L  ++R+ G++      LHDVE  +KE ++  H
Sbjct: 510 IKDKVHIFRVGESSHPRIREICTMLDNLVIELRKFGYKPSVEHELHDVEIGKKEELLMQH 569

Query: 717 SEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGG 776
           SEKLA+ FGL+    G+ +RI+KNLR+C+DCH   K  S  T R I+VRDANRFHHF  G
Sbjct: 570 SEKLALVFGLMCLPEGSTVRIMKNLRICVDCHEFMKAASMATRRFIIVRDANRFHHFSDG 629

Query: 777 VCSCGDYW 784
            CSCG++W
Sbjct: 630 HCSCGEFW 637



 Score =  135 bits (341), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 94/317 (29%), Positives = 158/317 (49%), Gaps = 6/317 (1%)

Query: 309 VNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKL 368
           V +S  + ++ +    G +      H   ++  +  + ++   L   YS+   +E AR++
Sbjct: 61  VQASDFIEILQLCARNGAVMEAKACHGKTMRMELQGDVTLSNVLINAYSKCGFVELARQV 120

Query: 369 FDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSAC-AQLGA 427
           FD   E+SL SWN MI  YT+N +  EA+ +F EM+      +  T+SS+LSAC A   A
Sbjct: 121 FDGMLERSLVSWNTMIGLYTRNRMESEALDIFWEMRNEGFKFSEFTISSVLSACGANCDA 180

Query: 428 ISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISG 487
           +   K +H L    + + N+YV TAL+D+YAKCG I +A ++F+ M  KS VTW++M++G
Sbjct: 181 LECKK-LHCLSMKTSLDLNLYVGTALLDLYAKCGMINDAVQVFESMQDKSSVTWSSMVAG 239

Query: 488 YGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKP 547
           Y    +  EAL L+       +  +  T  SV+ ACS+   + EG ++  ++I   GF  
Sbjct: 240 YVQSKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQM-HAVIRKSGFGS 298

Query: 548 LAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKL 607
                +  VD+  + G L ++   I     E    +W  ++     H       +  EK+
Sbjct: 299 NVFVASSAVDMYAKCGSLRESY-IIFSEVQEKNIELWNTIISGFAKHARPKEVMILFEKM 357

Query: 608 FE--LDPENVGYHVLLS 622
            +  + P  V +  LLS
Sbjct: 358 QQDGMHPNEVTFSSLLS 374



 Score =  106 bits (264), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 72/292 (24%), Positives = 144/292 (49%), Gaps = 2/292 (0%)

Query: 29  HAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNEMP 88
           H + +    Q D++    L +  S       AR +F  + +  L  +N +I  ++ N M 
Sbjct: 86  HGKTMRMELQGDVTLSNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRME 145

Query: 89  KSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAA 148
             ++  +  +R N       FT S VLSA  A CD      LH  ++ +    +L+VG A
Sbjct: 146 SEALDIFWEMR-NEGFKFSEFTISSVLSACGANCDALECKKLHCLSMKTSLDLNLYVGTA 204

Query: 149 LVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWL 208
           L+DLY K   +  A +VF+ M +K +V W+SM++G +++  +++++ ++    R      
Sbjct: 205 LLDLYAKCGMINDAVQVFESMQDKSSVTWSSMVAGYVQSKNYEEALLLYRRAQRMSLEQ- 263

Query: 209 DSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLF 268
           +  ++++V+ A + +  L  G ++  +  K GF  +V+V +  V  Y+KCG +  + ++F
Sbjct: 264 NQFTLSSVICACSNLAALIEGKQMHAVIRKSGFGSNVFVASSAVDMYAKCGSLRESYIIF 323

Query: 269 RDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPV 320
            ++   ++   N +ISG+  + + +  + LF ++       N  T   L+ V
Sbjct: 324 SEVQEKNIELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSV 375



 Score = 75.9 bits (185), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 49/137 (35%), Positives = 71/137 (51%), Gaps = 10/137 (7%)

Query: 397 ISLFQEMQASKVAP-------NPVTVSS---ILSACAQLGAISLGKWVHELVKSRNFESN 446
           IS+F   +  +++P       N V  S    IL  CA+ GA+   K  H        + +
Sbjct: 38  ISVFASYEQEELSPGRYSDEFNVVQASDFIEILQLCARNGAVMEAKACHGKTMRMELQGD 97

Query: 447 IYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLH 506
           + +S  LI+ Y+KCG +  AR++FD M  +S V+WNTMI  Y  +    EAL +F EM +
Sbjct: 98  VTLSNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFWEMRN 157

Query: 507 SGIRPSGVTFLSVLYAC 523
            G + S  T  SVL AC
Sbjct: 158 EGFKFSEFTISSVLSAC 174


>gi|296083568|emb|CBI23560.3| unnamed protein product [Vitis vinifera]
          Length = 497

 Score =  415 bits (1067), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 213/535 (39%), Positives = 324/535 (60%), Gaps = 42/535 (7%)

Query: 254 FYSKC---GEVERAELLFRDIVRPDLISCNAMISGYTCNGKTE-SSLRLFRQLLASAERV 309
            Y+KC   G V+ +  +F  +   +++S  A+I+ Y  +G+ +  ++ LF ++++++   
Sbjct: 1   MYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMISAS--- 57

Query: 310 NSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLF 369
                                NC          V NS     L ++Y+R   ME ARK F
Sbjct: 58  --------------------VNC----------VGNS-----LISMYARSGRMEDARKAF 82

Query: 370 DESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAIS 429
           D   EK+L S+NA++ GY +N  +EEA  LF E+  + +  +  T +S+LS  A +GA+ 
Sbjct: 83  DILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMG 142

Query: 430 LGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYG 489
            G+ +H  +    ++SN  +  ALI MY++CGNI  A ++F+ M  ++ ++W +MI+G+ 
Sbjct: 143 KGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFA 202

Query: 490 LHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLA 549
            HG    AL++F +ML +G +P+ +T+++VL ACSH G++ EG + F SM  +HG  P  
Sbjct: 203 KHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRM 262

Query: 550 EHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFE 609
           EHYACMVD+LGR+G L +A+EFI  + +     VW  LLGAC +H +T L R A+E + E
Sbjct: 263 EHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILE 322

Query: 610 LDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQ 669
            +P++   ++LLSN++++   +     +R+ +K+R L K  GC+ IEV    H F  G+ 
Sbjct: 323 QEPDDPAAYILLSNLHASAGQWKDVVKIRKSMKERNLIKEAGCSWIEVENRVHRFHVGET 382

Query: 670 LHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIAT 729
            HPQ+  IY  L++L  K++E G+  +T   LHD+EEE+KE  +  HSEK+A+AFGLI+T
Sbjct: 383 SHPQAWQIYQELDQLASKIKEMGYIPDTDFVLHDIEEEQKEQFLFQHSEKIAVAFGLIST 442

Query: 730 EPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
                IRI KNLRVC DCHTA K+IS  TGR IVVRD+NRFHH K GVCSC DYW
Sbjct: 443 SQSKPIRIFKNLRVCGDCHTAIKYISMATGREIVVRDSNRFHHIKNGVCSCNDYW 497



 Score =  142 bits (358), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 103/387 (26%), Positives = 187/387 (48%), Gaps = 49/387 (12%)

Query: 159 VKSARKVFDKMPEKDTVLWNSMISGLMKNC-CFQDSIWVFGDMVRNGGTWLDSTSVAAVL 217
           V  +RKVF++MPE + + W ++I+  +++  C +++I +F  M+        S SV    
Sbjct: 11  VDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMI--------SASV---- 58

Query: 218 PAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLI 277
                           C+G              L+S Y++ G +E A   F  +   +L+
Sbjct: 59  ---------------NCVG------------NSLISMYARSGRMEDARKAFDILFEKNLV 91

Query: 278 SCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFC 337
           S NA++ GY  N K+E +  LF ++  +   +++ T   L+      G +     IH   
Sbjct: 92  SYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRL 151

Query: 338 LKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAI 397
           LK G  SN  +  AL ++YSR   +EAA ++F+E  ++++ SW +MI G+ ++G    A+
Sbjct: 152 LKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRAL 211

Query: 398 SLFQEMQASKVAPNPVTVSSILSACAQLGAISLG-KWVHELVKSRNFESNIYVSTALIDM 456
            +F +M  +   PN +T  ++LSAC+ +G IS G K  + + K       +     ++D+
Sbjct: 212 EMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDL 271

Query: 457 YAKCGNIVEARELFDLMSHKSE-VTWNTMISGYGLHGH---GLEALQLFSEMLHSGIRPS 512
             + G +VEA E  + M   ++ + W T++    +HG+   G  A ++  E       P+
Sbjct: 272 LGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILE--QEPDDPA 329

Query: 513 GVTFLSVLYACSHAGLVREGDEIFQSM 539
               LS L+A   AG  ++  +I +SM
Sbjct: 330 AYILLSNLHAS--AGQWKDVVKIRKSM 354



 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 47/174 (27%), Positives = 97/174 (55%), Gaps = 1/174 (0%)

Query: 145 VGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNG 204
           VG +L+ +Y +   ++ ARK FD + EK+ V +N+++ G  KN   +++  +F + + + 
Sbjct: 61  VGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNE-IADT 119

Query: 205 GTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERA 264
           G  + + + A++L   A +  +  G +I    LK G+  +  +   L+S YS+CG +E A
Sbjct: 120 GIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAA 179

Query: 265 ELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLI 318
             +F ++   ++IS  +MI+G+  +G    +L +F ++L +  + N  T V ++
Sbjct: 180 FQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVL 233



 Score = 69.3 bits (168), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 46/185 (24%), Positives = 94/185 (50%), Gaps = 8/185 (4%)

Query: 39  NDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHL 98
           N L ++   + R+ D      AR  F  + + +L  +N I+ G++ N   + +   +  +
Sbjct: 63  NSLISMYARSGRMED------ARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEI 116

Query: 99  RKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSW 158
             +T +    FT++ +LS A++      G  +HG  +  GY S+  +  AL+ +Y +   
Sbjct: 117 -ADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGN 175

Query: 159 VKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLP 218
           +++A +VF++M +++ + W SMI+G  K+     ++ +F  M+   GT  +  +  AVL 
Sbjct: 176 IEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLET-GTKPNEITYVAVLS 234

Query: 219 AVAEV 223
           A + V
Sbjct: 235 ACSHV 239


>gi|224080790|ref|XP_002306231.1| predicted protein [Populus trichocarpa]
 gi|222849195|gb|EEE86742.1| predicted protein [Populus trichocarpa]
          Length = 480

 Score =  415 bits (1067), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 207/474 (43%), Positives = 296/474 (62%), Gaps = 8/474 (1%)

Query: 312 STIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDE 371
           STI+   P   PF        +H+  +K   V + SV TAL   Y +   ++ A K+F  
Sbjct: 14  STILTAQPGVSPFE-------MHAQAIKRNYVKSPSVGTALLDAYVKRGNVDEASKVFQR 66

Query: 372 SSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGA-ISL 430
             EK + +W+AMI GY Q G TE A+ +F +M   K+ PN  T S I++ACA   A +  
Sbjct: 67  IEEKDIVAWSAMICGYAQIGDTEGAVRIFVQMAKEKIKPNEYTFSGIINACAAPTAGVEQ 126

Query: 431 GKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGL 490
           GK +H       F + + VS+AL+ MY+K G+I  A E+F     +  V+WN++ISGY  
Sbjct: 127 GKQLHAWSIKSRFNNALCVSSALLTMYSKRGDIESAFEVFKRQRERDLVSWNSIISGYAQ 186

Query: 491 HGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAE 550
           HG+G +AL++F EM    +   GVTF+ V+ AC+H GL  EG   F  M+ DH  +P  E
Sbjct: 187 HGYGRKALEVFEEMQRQNLEMDGVTFIGVISACTHTGLANEGQRYFDIMVKDHHIEPRME 246

Query: 551 HYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFEL 610
           HY+CMVD+ GRAG L KA+E I  +       VW  LL A  IH++  + ++A++KL  L
Sbjct: 247 HYSCMVDLYGRAGMLVKAMEIINEMPFPASANVWRTLLAASCIHRNLEVGKLAADKLISL 306

Query: 611 DPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQL 670
            P+N   +VLL+N+Y++  ++ + A VR++++++K+ K  G + IEV    + F +GD  
Sbjct: 307 QPQNPASYVLLTNMYASVGNWKERAKVRKLMEEKKVKKVAGYSWIEVKNKTYTFLAGDVS 366

Query: 671 HPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATE 730
           HP S  IYA LE+L+ +++ AG+Q +T     DV+EE KE ++  HSE+LAIAFGLI T 
Sbjct: 367 HPLSNQIYAKLEELSCQLKGAGYQPDTSYVFQDVDEEHKEAILSQHSERLAIAFGLIGTP 426

Query: 731 PGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           PGT ++I+KNLRVC DCH+  K IS + GR IVVRD+NRFHHFKGG+CSCGDYW
Sbjct: 427 PGTPLQIVKNLRVCGDCHSVIKLISILEGRDIVVRDSNRFHHFKGGLCSCGDYW 480



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 92/377 (24%), Positives = 163/377 (43%), Gaps = 44/377 (11%)

Query: 103 ALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSA 162
            + P++FTYS +L+A            +H  AI   Y     VG AL+D Y K   V  A
Sbjct: 5   GIKPNDFTYSTILTAQPGVSP----FEMHAQAIKRNYVKSPSVGTALLDAYVKRGNVDEA 60

Query: 163 RKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAE 222
            KVF ++ EKD V W++MI G  +    + ++ +F  M +      + T    +    A 
Sbjct: 61  SKVFQRIEEKDIVAWSAMICGYAQIGDTEGAVRIFVQMAKEKIKPNEYTFSGIINACAAP 120

Query: 223 VQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAM 282
              +  G ++    +K  F++ + V + L++ YSK G++E A  +F+     DL+S N++
Sbjct: 121 TAGVEQGKQLHAWSIKSRFNNALCVSSALLTMYSKRGDIESAFEVFKRQRERDLVSWNSI 180

Query: 283 ISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGI 342
           ISGY  +G    +L +F ++      ++  T +G+I           + C H        
Sbjct: 181 ISGYAQHGYGRKALEVFEEMQRQNLEMDGVTFIGVI-----------SACTH-------- 221

Query: 343 VSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQE 402
                  T L+    R  ++     + D   E  +  ++ M+  Y + G+  +A+ +  E
Sbjct: 222 -------TGLANEGQRYFDI----MVKDHHIEPRMEHYSCMVDLYGRAGMLVKAMEIINE 270

Query: 403 MQASKVAPNPVTVS---SILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAK 459
           M      P P + +   ++L+A      + +GK   + + S     N      L +MYA 
Sbjct: 271 M------PFPASANVWRTLLAASCIHRNLEVGKLAADKLISLQ-PQNPASYVLLTNMYAS 323

Query: 460 CGNIVEARELFDLMSHK 476
            GN  E  ++  LM  K
Sbjct: 324 VGNWKERAKVRKLMEEK 340


>gi|312190418|gb|ADQ43217.1| pentatricopeptide repeat [Eutrema parvulum]
          Length = 616

 Score =  415 bits (1067), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 219/553 (39%), Positives = 314/553 (56%), Gaps = 33/553 (5%)

Query: 265 ELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPF 324
           ++ F    RPD    N MI G +C+ + + SL L+ ++L  +   N+ T   L+      
Sbjct: 64  DVFFNGFDRPDTFLWNLMIRGLSCSDQPDRSLLLYHRMLCCSAPHNAYTFPFLLKACSNL 123

Query: 325 GHLHLTNCIHSFCLKSG----IVSNSSVLTALSTV------------------------- 355
                T  IH+   K G    I + +S++ + +                           
Sbjct: 124 SAFQETTQIHAHITKFGYGHDIYAVNSLINSYAVTGNFKHAHLLFDRIQEPDAVSWNSVI 183

Query: 356 --YSRLNEMEAARKLFDESSEKSLA-SWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNP 412
             Y +  EM+ A  LF +  EK+ A SW  MI+GY Q G+ +EA+ LF EMQ S V P+ 
Sbjct: 184 KGYVKAGEMDMALTLFRKMPEKNNAISWTTMISGYVQAGMNKEALQLFHEMQNSNVPPDN 243

Query: 413 VTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDL 472
           V+++S LSAC+QLGA+  GKW+H          +  +   LIDMYAKCG + EA  +F  
Sbjct: 244 VSLASALSACSQLGALEQGKWIHSYANKTRTRIDSVLCCVLIDMYAKCGEMEEALGVFKN 303

Query: 473 MSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREG 532
           M  KS   W  +ISGY  HG G EA+  F EM + G++P+ +TF +VL ACS+ GLV EG
Sbjct: 304 MKTKSVQVWTALISGYAYHGLGREAISKFLEMQNMGVKPNAITFTAVLTACSYTGLVEEG 363

Query: 533 DEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACM 592
             +F ++  D+  KP  EHY CMVD+LGRAG L +A  FI+ + ++P   +WG+LL AC 
Sbjct: 364 KSVFNTIERDYNLKPTIEHYGCMVDLLGRAGLLNEANRFIQKMPLKPNAVIWGSLLKACQ 423

Query: 593 IHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGC 652
           IHK+  L     E L E+D  + G +V ++NI++  + + +AA  R++++++ + K PGC
Sbjct: 424 IHKNIELGEKIGEILIEMDSNHGGRYVHMANIHAMGKKWDKAAETRRLMREQGVVKVPGC 483

Query: 653 TLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHD-VEEEEKEL 711
           + I + GT H F +GD+ H +   I      +  K+ E G+  E    L D V++EEKE 
Sbjct: 484 SAISLEGTTHEFLAGDRSHAEIQEIRTKWRFVRRKLEENGYVPELEDMLLDLVDDEEKEA 543

Query: 712 MMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFH 771
           ++  HSEKLAI +GL+ T+PGT IRI+KNLRVC DCH     ISK+  R IV+RD  RFH
Sbjct: 544 IVHQHSEKLAITYGLMKTKPGTTIRIMKNLRVCKDCHKVMNLISKIYKRDIVMRDRTRFH 603

Query: 772 HFKGGVCSCGDYW 784
           HFK G CSCGDYW
Sbjct: 604 HFKDGKCSCGDYW 616



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 93/360 (25%), Positives = 162/360 (45%), Gaps = 35/360 (9%)

Query: 166 FDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQE 225
           F+     DT LWN MI GL  +     S+ ++  M+       ++ +   +L A + +  
Sbjct: 67  FNGFDRPDTFLWNLMIRGLSCSDQPDRSLLLYHRMLCCSAPH-NAYTFPFLLKACSNLSA 125

Query: 226 LRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISG 285
            +   +I     K G+   +Y +  L++ Y+  G  + A LLF  I  PD +S N++I G
Sbjct: 126 FQETTQIHAHITKFGYGHDIYAVNSLINSYAVTGNFKHAHLLFDRIQEPDAVSWNSVIKG 185

Query: 286 YTCNGKTESSLRLFRQLLASAERVNSSTIVG----------LIPVFYP------------ 323
           Y   G+ + +L LFR++      ++ +T++            + +F+             
Sbjct: 186 YVKAGEMDMALTLFRKMPEKNNAISWTTMISGYVQAGMNKEALQLFHEMQNSNVPPDNVS 245

Query: 324 ----------FGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESS 373
                      G L     IHS+  K+    +S +   L  +Y++  EME A  +F    
Sbjct: 246 LASALSACSQLGALEQGKWIHSYANKTRTRIDSVLCCVLIDMYAKCGEMEEALGVFKNMK 305

Query: 374 EKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKW 433
            KS+  W A+I+GY  +GL  EAIS F EMQ   V PN +T +++L+AC+  G +  GK 
Sbjct: 306 TKSVQVWTALISGYAYHGLGREAISKFLEMQNMGVKPNAITFTAVLTACSYTGLVEEGKS 365

Query: 434 VHELV-KSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHK-SEVTWNTMISGYGLH 491
           V   + +  N +  I     ++D+  + G + EA      M  K + V W +++    +H
Sbjct: 366 VFNTIERDYNLKPTIEHYGCMVDLLGRAGLLNEANRFIQKMPLKPNAVIWGSLLKACQIH 425



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 122/471 (25%), Positives = 213/471 (45%), Gaps = 26/471 (5%)

Query: 13  LSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFS-IPKPD 71
           LS L+   T+ +L Q HA+++  G   D   +TK          + YA  +FF+   +PD
Sbjct: 15  LSCLQKCPTEVELKQIHARMLKSGLLQDPYAMTKFLSFCLSSSFSSYAHDVFFNGFDRPD 74

Query: 72  LFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDN-FTYSFVLSAASACCDRSIGVLL 130
            FL+N++IRG S ++ P  S+  Y  +   +A  P N +T+ F+L A S          +
Sbjct: 75  TFLWNLMIRGLSCSDQPDRSLLLYHRMLCCSA--PHNAYTFPFLLKACSNLSAFQETTQI 132

Query: 131 HGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCF 190
           H H    GYG D++   +L++ Y      K A  +FD++ E D V WNS+I G +K    
Sbjct: 133 HAHITKFGYGHDIYAVNSLINSYAVTGNFKHAHLLFDRIQEPDAVSWNSVIKGYVKAGEM 192

Query: 191 QDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTG 250
             ++ +F  M         +T ++  + A    + L+L  E+Q   +     D+V + + 
Sbjct: 193 DMALTLFRKMPEKNNAISWTTMISGYVQAGMNKEALQLFHEMQNSNVP---PDNVSLASA 249

Query: 251 LVSFYSKCGEVERAELLF----RDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASA 306
           L S  S+ G +E+ + +     +   R D + C  +I  Y   G+ E +L +F+ +   +
Sbjct: 250 L-SACSQLGALEQGKWIHSYANKTRTRIDSVLCCVLIDMYAKCGEMEEALGVFKNMKTKS 308

Query: 307 ERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAAR 366
            +V ++ I G    ++  G   ++  +    +  G+  N+   TA+ T  S    +E  +
Sbjct: 309 VQVWTALISGY--AYHGLGREAISKFLEMQNM--GVKPNAITFTAVLTACSYTGLVEEGK 364

Query: 367 KLF-----DESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSA 421
            +F     D + + ++  +  M+    + GL  EA    Q+M    + PN V   S+L A
Sbjct: 365 SVFNTIERDYNLKPTIEHYGCMVDLLGRAGLLNEANRFIQKM---PLKPNAVIWGSLLKA 421

Query: 422 CAQLGAISLGKWVHE-LVKSRNFESNIYVSTALID-MYAKCGNIVEARELF 470
           C     I LG+ + E L++  +     YV  A I  M  K     E R L 
Sbjct: 422 CQIHKNIELGEKIGEILIEMDSNHGGRYVHMANIHAMGKKWDKAAETRRLM 472



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 85/321 (26%), Positives = 132/321 (41%), Gaps = 48/321 (14%)

Query: 333 IHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEK-SLASWNAMIAGYTQNG 391
           IH+  LKSG++ +   +T   +     +    A  +F    ++     WN MI G + + 
Sbjct: 30  IHARMLKSGLLQDPYAMTKFLSFCLSSSFSSYAHDVFFNGFDRPDTFLWNLMIRGLSCSD 89

Query: 392 LTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVST 451
             + ++ L+  M       N  T   +L AC+ L A      +H  +    +  +IY   
Sbjct: 90  QPDRSLLLYHRMLCCSAPHNAYTFPFLLKACSNLSAFQETTQIHAHITKFGYGHDIYAVN 149

Query: 452 ALIDMYAKCGNIVEARELFDLMSHKSEVTWNT---------------------------- 483
           +LI+ YA  GN   A  LFD +     V+WN+                            
Sbjct: 150 SLINSYAVTGNFKHAHLLFDRIQEPDAVSWNSVIKGYVKAGEMDMALTLFRKMPEKNNAI 209

Query: 484 ----MISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSM 539
               MISGY   G   EALQLF EM +S + P  V+  S L ACS  G + +G       
Sbjct: 210 SWTTMISGYVQAGMNKEALQLFHEMQNSNVPPDNVSLASALSACSQLGALEQG-----KW 264

Query: 540 IHDHGFKPLA--EHYAC--MVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHK 595
           IH +  K     +   C  ++D+  + G++E+AL   K +  +    VW AL+     H 
Sbjct: 265 IHSYANKTRTRIDSVLCCVLIDMYAKCGEMEEALGVFKNMKTK-SVQVWTALISGYAYH- 322

Query: 596 DTNLARVASEKLFELDPENVG 616
              L R A  K  E+  +N+G
Sbjct: 323 --GLGREAISKFLEM--QNMG 339



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 63/250 (25%), Positives = 107/250 (42%), Gaps = 35/250 (14%)

Query: 6   PQSRNLFLSLLKGAKTQS---QLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARA 62
           P +   F  LLK     S   + TQ HA I   G+ +D+  V  L +  +      +A  
Sbjct: 107 PHNAYTFPFLLKACSNLSAFQETTQIHAHITKFGYGHDIYAVNSLINSYAVTGNFKHAHL 166

Query: 63  LFFSIPKPDLFLFNVIIRGFSN-----------NEMPK--SSICFYT------------- 96
           LF  I +PD   +N +I+G+              +MP+  ++I + T             
Sbjct: 167 LFDRIQEPDAVSWNSVIKGYVKAGEMDMALTLFRKMPEKNNAISWTTMISGYVQAGMNKE 226

Query: 97  -----HLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVD 151
                H  +N+ + PDN + +  LSA S       G  +H +A  +    D  +   L+D
Sbjct: 227 ALQLFHEMQNSNVPPDNVSLASALSACSQLGALEQGKWIHSYANKTRTRIDSVLCCVLID 286

Query: 152 LYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDST 211
           +Y K   ++ A  VF  M  K   +W ++ISG   +   +++I  F +M +N G   ++ 
Sbjct: 287 MYAKCGEMEEALGVFKNMKTKSVQVWTALISGYAYHGLGREAISKFLEM-QNMGVKPNAI 345

Query: 212 SVAAVLPAVA 221
           +  AVL A +
Sbjct: 346 TFTAVLTACS 355


>gi|357121594|ref|XP_003562503.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Brachypodium distachyon]
          Length = 544

 Score =  415 bits (1067), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 220/548 (40%), Positives = 315/548 (57%), Gaps = 43/548 (7%)

Query: 238 KLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLR 297
           KLGF          +  Y   G V  A  +F  + R D +S N+MI GY  +G   S+ R
Sbjct: 39  KLGFLLCTRTNNAFIQGYCSAGRVTDARRVFDGMPRRDTVSFNSMIHGYAVSGDVGSAQR 98

Query: 298 LFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYS 357
           LF ++LA              PV +       T+ +  FC                    
Sbjct: 99  LFERVLAPT------------PVTW-------TSMVAGFC-------------------- 119

Query: 358 RLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSS 417
           R  ++E+AR++F+E  E+ L SWNAMI+G   N L  EA+ LF+ M      PN  TV S
Sbjct: 120 RAGDVESARRVFEEMPERDLVSWNAMISGCVGNRLPVEALCLFRWMMEEGFVPNRGTVVS 179

Query: 418 ILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKS 477
           +LSAC   GA+  GKWVH  V+ +    + ++ TAL+DMYAKCG +  A E+F  +  ++
Sbjct: 180 VLSACTGAGALETGKWVHVFVEKKRLRWDEFLGTALVDMYAKCGAVELALEVFTGLRARN 239

Query: 478 EVTWNTMISGYGLHGHGLEALQLFSEM-LHSGIRPSGVTFLSVLYACSHAGLVREGDEIF 536
             TWN MI+G  ++G+  +AL +F +M L+  + P  VTF+ VL ACSHAG V  G E F
Sbjct: 240 TCTWNAMINGLAMNGYSAKALDMFRQMELNGTVAPDEVTFVGVLLACSHAGFVDAGKEHF 299

Query: 537 QSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKD 596
            ++   +G + + EHYACMVD+L R+G L++A + I  + ++P   VW ALLG C +HK+
Sbjct: 300 YTIPQKYGVELILEHYACMVDLLARSGHLQEAHKLITEMPMKPDVVVWRALLGGCRLHKN 359

Query: 597 TNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIE 656
               ++A   + E++    G HVLLSN+Y+A   +     VR+ ++ + + K PGC+ +E
Sbjct: 360 V---KMAENVISEMEATCSGDHVLLSNLYAAVGRWNGVEDVRRTMRSKGIEKIPGCSSVE 416

Query: 657 VGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVH 716
           + G+ H F SGD+ HP    I+A L ++ G+M++ G+ TET    +D+E+EEKE  +  H
Sbjct: 417 MDGSIHEFISGDKSHPSYDDIHAKLIEIGGRMQQHGYVTETAEVFYDIEDEEKEQALGYH 476

Query: 717 SEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGG 776
           SEKLAIAFGLI   P   IRI+KNLR C DCH+  K +SK+  R IVVRD  RFHHF+GG
Sbjct: 477 SEKLAIAFGLIGGPPEATIRIVKNLRFCTDCHSFAKLVSKIYHREIVVRDRARFHHFRGG 536

Query: 777 VCSCGDYW 784
            CSC D+W
Sbjct: 537 ACSCNDFW 544



 Score = 89.4 bits (220), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 91/354 (25%), Positives = 160/354 (45%), Gaps = 37/354 (10%)

Query: 125 SIGVLLHGHAIVSGYGS--DLF---------VGAALVDLYFKFSWVKSARKVFDKMPEKD 173
           S   ++HG+A+    GS   LF            ++V  + +   V+SAR+VF++MPE+D
Sbjct: 79  SFNSMIHGYAVSGDVGSAQRLFERVLAPTPVTWTSMVAGFCRAGDVESARRVFEEMPERD 138

Query: 174 TVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQ 233
            V WN+MISG + N    +++ +F  M+  G    +  +V +VL A      L  G  + 
Sbjct: 139 LVSWNAMISGCVGNRLPVEALCLFRWMMEEGFV-PNRGTVVSVLSACTGAGALETGKWVH 197

Query: 234 CLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTE 293
               K       ++ T LV  Y+KCG VE A  +F  +   +  + NAMI+G   NG + 
Sbjct: 198 VFVEKKRLRWDEFLGTALVDMYAKCGAVELALEVFTGLRARNTCTWNAMINGLAMNGYSA 257

Query: 294 SSLRLFRQL-LASAERVNSSTIVGLIPV-----FYPFGHLHLTNCIHSFCLKSGIVSNSS 347
            +L +FRQ+ L      +  T VG++       F   G  H     ++   K G+     
Sbjct: 258 KALDMFRQMELNGTVAPDEVTFVGVLLACSHAGFVDAGKEHF----YTIPQKYGVELILE 313

Query: 348 VLTALSTVYSRLNEMEAARKLFDESSEK-SLASWNAMIAGYTQNGLTEEAISLFQEMQAS 406
               +  + +R   ++ A KL  E   K  +  W A++ G   +   + A ++  EM+A+
Sbjct: 314 HYACMVDLLARSGHLQEAHKLITEMPMKPDVVVWRALLGGCRLHKNVKMAENVISEMEAT 373

Query: 407 KVAPNPVTVSSILSACAQLGAISLGKW-----VHELVKSRNFESNIYVSTALID 455
             + + V +S++ +A        +G+W     V   ++S+  E     S+  +D
Sbjct: 374 -CSGDHVLLSNLYAA--------VGRWNGVEDVRRTMRSKGIEKIPGCSSVEMD 418



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 67/261 (25%), Positives = 109/261 (41%), Gaps = 41/261 (15%)

Query: 328 HLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGY 387
           H    +H+ C K G +  +    A    Y     +  AR++FD    +   S+N+MI GY
Sbjct: 28  HHLPSLHAVCTKLGFLLCTRTNNAFIQGYCSAGRVTDARRVFDGMPRRDTVSFNSMIHGY 87

Query: 388 TQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNI 447
             +G    A  LF+ +    +AP PVT +S+++                           
Sbjct: 88  AVSGDVGSAQRLFERV----LAPTPVTWTSMVAG-------------------------- 117

Query: 448 YVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHS 507
                    + + G++  AR +F+ M  +  V+WN MISG   +   +EAL LF  M+  
Sbjct: 118 ---------FCRAGDVESARRVFEEMPERDLVSWNAMISGCVGNRLPVEALCLFRWMMEE 168

Query: 508 GIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEK 567
           G  P+  T +SVL AC+ AG +  G  +    +     +        +VD+  + G +E 
Sbjct: 169 GFVPNRGTVVSVLSACTGAGALETGKWV-HVFVEKKRLRWDEFLGTALVDMYAKCGAVEL 227

Query: 568 ALEFIKGLAVEPGPAVWGALL 588
           ALE   GL        W A++
Sbjct: 228 ALEVFTGLRAR-NTCTWNAMI 247



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 61/228 (26%), Positives = 105/228 (46%), Gaps = 3/228 (1%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           AR +F  +P+ DL  +N +I G   N +P  ++C +  + +     P+  T   VLSA +
Sbjct: 127 ARRVFEEMPERDLVSWNAMISGCVGNRLPVEALCLFRWMMEE-GFVPNRGTVVSVLSACT 185

Query: 120 ACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNS 179
                  G  +H          D F+G ALVD+Y K   V+ A +VF  +  ++T  WN+
Sbjct: 186 GAGALETGKWVHVFVEKKRLRWDEFLGTALVDMYAKCGAVELALEVFTGLRARNTCTWNA 245

Query: 180 MISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGME-IQCLGLK 238
           MI+GL  N     ++ +F  M  NG    D  +   VL A +    +  G E    +  K
Sbjct: 246 MINGLAMNGYSAKALDMFRQMELNGTVAPDEVTFVGVLLACSHAGFVDAGKEHFYTIPQK 305

Query: 239 LGFHDHVYVLTGLVSFYSKCGEVERAELLFRDI-VRPDLISCNAMISG 285
            G    +     +V   ++ G ++ A  L  ++ ++PD++   A++ G
Sbjct: 306 YGVELILEHYACMVDLLARSGHLQEAHKLITEMPMKPDVVVWRALLGG 353


>gi|357126882|ref|XP_003565116.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g13880-like [Brachypodium distachyon]
          Length = 796

 Score =  415 bits (1067), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 239/738 (32%), Positives = 389/738 (52%), Gaps = 20/738 (2%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           AR L   +P+ +   FN++I  +S     + S+  + H  +   +  D FTY+  L+A S
Sbjct: 66  ARRLLDEMPRRNAVSFNLLIDAYSRAGQTEESLETFLHAHRAAEVKADRFTYAAALAACS 125

Query: 120 ACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNS 179
                  G ++H  A++ G    +FV  +LV +Y +   +  AR+VFD   E+D V WNS
Sbjct: 126 RAGRLKEGKVVHALAVLEGLAEGVFVSNSLVSMYARCGDMGEARRVFDVTEERDDVSWNS 185

Query: 180 MISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLG--L 237
           ++SG ++    ++ + VF  ++R     L+S ++ +V+   +       G+     G  +
Sbjct: 186 LVSGYLRVGAHEEMLRVFA-LMRRCAMGLNSFALGSVIKCCSGGDGSVRGIAEAVHGCVV 244

Query: 238 KLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLR 297
           K G    +++ + +V  Y+K G +  A  LF+ ++ P+++  NAMI+G  C  +      
Sbjct: 245 KAGLDTDLFLASAMVDMYAKRGALSEAVALFKSVLDPNVVVFNAMIAGL-CRDEAAVHKE 303

Query: 298 LFRQLLASAERVNSSTIVGLIPVFYPF----------GHLHLTNCIHSFCLKSGIVSNSS 347
           + R+ L+    + S    G+ P  + F          G +     IH   LK     +  
Sbjct: 304 VVREALSLYSELQSR---GMEPTEFTFSSVIRACNLAGDIEFGKQIHGQVLKHCFQGDDF 360

Query: 348 VLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASK 407
           + +AL  +Y     ME   + F    ++ + +W AMI+G  QN L E A++LF E+    
Sbjct: 361 IGSALIDLYFNSACMEDGFRCFRSVPKQDVVTWTAMISGCVQNELFERALALFHELLGVG 420

Query: 408 VAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEAR 467
           + P+P T+SS+++ACA L  +  G+ +        F+    +  + I MYA+ GN+  A 
Sbjct: 421 LKPDPFTISSVMNACASLAVVRTGEQMQCFATKSGFDRFTAMGNSCIHMYARSGNVEAAI 480

Query: 468 ELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAG 527
           + F  M     V+W+ +IS +  HG   +ALQ F+EM+ + + P+ +TFL VL ACSH G
Sbjct: 481 QRFQEMESHDVVSWSAIISSHAQHGCARQALQFFNEMVGAKVVPNEITFLGVLTACSHGG 540

Query: 528 LVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGAL 587
           LV EG   ++ M  ++G  P  +H  C+VD+LGRAG+L  A  FI+       P VW +L
Sbjct: 541 LVDEGLRYYEIMKMEYGLCPTVKHCTCVVDLLGRAGRLADAEAFIRDSIFHDEPVVWQSL 600

Query: 588 LGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLA 647
           LG+C IH+D    ++ ++++ EL P + G +V L N+Y    +    + +R ++K+R + 
Sbjct: 601 LGSCRIHRDMERGQLVADRIMELQPASSGCYVNLYNMYLDAGELSLGSKIRDLMKERGVK 660

Query: 648 KAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEE 707
           K PG + IE+    H F +GD+ HP+  AIY  L ++  K+ +    T   + +  VE  
Sbjct: 661 KEPGLSWIELRSGIHSFVAGDKSHPECNAIYTKLAEMLSKIDK--LTTTDTSCIEWVETT 718

Query: 708 EKEL-MMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRD 766
            +E   M  HSEKLA+A G+I       IR++KNLRVC DCH+  K ISK   R I++RD
Sbjct: 719 GREQNWMNCHSEKLAVALGIIHLPQSAPIRVMKNLRVCRDCHSTMKLISKSECREIILRD 778

Query: 767 ANRFHHFKGGVCSCGDYW 784
             RFHHF+ G CSCGDYW
Sbjct: 779 VIRFHHFRDGSCSCGDYW 796



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 78/297 (26%), Positives = 154/297 (51%), Gaps = 8/297 (2%)

Query: 28  THAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNN-- 85
            H  ++  G   DL   + +    +   A   A ALF S+  P++ +FN +I G   +  
Sbjct: 239 VHGCVVKAGLDTDLFLASAMVDMYAKRGALSEAVALFKSVLDPNVVVFNAMIAGLCRDEA 298

Query: 86  ----EMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGS 141
               E+ + ++  Y+ L ++  + P  FT+S V+ A +   D   G  +HG  +   +  
Sbjct: 299 AVHKEVVREALSLYSEL-QSRGMEPTEFTFSSVIRACNLAGDIEFGKQIHGQVLKHCFQG 357

Query: 142 DLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMV 201
           D F+G+AL+DLYF  + ++   + F  +P++D V W +MISG ++N  F+ ++ +F +++
Sbjct: 358 DDFIGSALIDLYFNSACMEDGFRCFRSVPKQDVVTWTAMISGCVQNELFERALALFHELL 417

Query: 202 RNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEV 261
              G   D  ++++V+ A A +  +R G ++QC   K GF     +    +  Y++ G V
Sbjct: 418 -GVGLKPDPFTISSVMNACASLAVVRTGEQMQCFATKSGFDRFTAMGNSCIHMYARSGNV 476

Query: 262 ERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLI 318
           E A   F+++   D++S +A+IS +  +G    +L+ F +++ +    N  T +G++
Sbjct: 477 EAAIQRFQEMESHDVVSWSAIISSHAQHGCARQALQFFNEMVGAKVVPNEITFLGVL 533



 Score = 73.2 bits (178), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 61/252 (24%), Positives = 111/252 (44%), Gaps = 7/252 (2%)

Query: 27  QTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARAL--FFSIPKPDLFLFNVIIRGFSN 84
           Q H Q++ H FQ D    + L      F + C       F S+PK D+  +  +I G   
Sbjct: 345 QIHGQVLKHCFQGDDFIGSALIDLY--FNSACMEDGFRCFRSVPKQDVVTWTAMISGCVQ 402

Query: 85  NEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLF 144
           NE+ + ++  + H      L PD FT S V++A ++      G  +   A  SG+     
Sbjct: 403 NELFERALALF-HELLGVGLKPDPFTISSVMNACASLAVVRTGEQMQCFATKSGFDRFTA 461

Query: 145 VGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNG 204
           +G + + +Y +   V++A + F +M   D V W+++IS   ++ C + ++  F +MV   
Sbjct: 462 MGNSCIHMYARSGNVEAAIQRFQEMESHDVVSWSAIISSHAQHGCARQALQFFNEMV-GA 520

Query: 205 GTWLDSTSVAAVLPAVAEVQELRLGME-IQCLGLKLGFHDHVYVLTGLVSFYSKCGEVER 263
               +  +   VL A +    +  G+   + + ++ G    V   T +V    + G +  
Sbjct: 521 KVVPNEITFLGVLTACSHGGLVDEGLRYYEIMKMEYGLCPTVKHCTCVVDLLGRAGRLAD 580

Query: 264 AELLFRDIVRPD 275
           AE   RD +  D
Sbjct: 581 AEAFIRDSIFHD 592


>gi|334187432|ref|NP_196098.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|223635619|sp|Q9LZ19.2|PP364_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g04780
 gi|332003400|gb|AED90783.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 635

 Score =  415 bits (1066), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 213/548 (38%), Positives = 325/548 (59%)

Query: 237 LKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSL 296
           +++     V +L  L++ YSKCG VE A  +F  ++   L+S N MI  YT N     +L
Sbjct: 88  IRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEAL 147

Query: 297 RLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVY 356
            +F ++     + +  TI  ++              +H   +K+ I  N  V TAL  +Y
Sbjct: 148 DIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLY 207

Query: 357 SRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVS 416
           ++   ++ A ++F+   +KS  +W++M+AGY QN   EEA+ L++  Q   +  N  T+S
Sbjct: 208 AKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLS 267

Query: 417 SILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHK 476
           S++ AC+ L A+  GK +H ++    F SN++V+++ +DMYAKCG++ E+  +F  +  K
Sbjct: 268 SVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEK 327

Query: 477 SEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIF 536
           +   WNT+ISG+  H    E + LF +M   G+ P+ VTF S+L  C H GLV EG   F
Sbjct: 328 NLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFF 387

Query: 537 QSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKD 596
           + M   +G  P   HY+CMVDILGRAG L +A E IK +  +P  ++WG+LL +C ++K+
Sbjct: 388 KLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLASCRVYKN 447

Query: 597 TNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIE 656
             LA VA+EKLFEL+PEN G HVLLSNIY+A + + + A  R++++   + K  G + I+
Sbjct: 448 LELAEVAAEKLFELEPENAGNHVLLSNIYAANKQWEEIAKSRKLLRDCDVKKVRGKSWID 507

Query: 657 VGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVH 716
           +    H F+ G+  HP+   I + L+ L  K R+ G++      LHDVE  +KE ++  H
Sbjct: 508 IKDKVHTFSVGESGHPRIREICSTLDNLVIKFRKFGYKPSVEHELHDVEIGKKEELLMQH 567

Query: 717 SEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGG 776
           SEKLA+ FGL+     + +RI+KNLR+C+DCH   K  S  T R I+VRD NRFHHF  G
Sbjct: 568 SEKLALVFGLMCLPESSPVRIMKNLRICVDCHEFMKAASMATRRFIIVRDVNRFHHFSDG 627

Query: 777 VCSCGDYW 784
            CSCGD+W
Sbjct: 628 HCSCGDFW 635



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 90/291 (30%), Positives = 147/291 (50%), Gaps = 4/291 (1%)

Query: 334 HSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLT 393
           H   ++  +  + ++L  L   YS+   +E AR++FD   E+SL SWN MI  YT+N + 
Sbjct: 84  HGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRME 143

Query: 394 EEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTAL 453
            EA+ +F EM+      +  T+SS+LSAC         K +H L      + N+YV TAL
Sbjct: 144 SEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTAL 203

Query: 454 IDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSG 513
           +D+YAKCG I +A ++F+ M  KS VTW++M++GY  + +  EAL L+       +  + 
Sbjct: 204 LDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQ 263

Query: 514 VTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIK 573
            T  SV+ ACS+   + EG ++  ++I   GF       +  VD+  + G L ++   I 
Sbjct: 264 FTLSSVICACSNLAALIEGKQM-HAVICKSGFGSNVFVASSAVDMYAKCGSLRESY-IIF 321

Query: 574 GLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFE--LDPENVGYHVLLS 622
               E    +W  ++     H       +  EK+ +  + P  V +  LLS
Sbjct: 322 SEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLS 372



 Score =  113 bits (282), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 109/447 (24%), Positives = 203/447 (45%), Gaps = 26/447 (5%)

Query: 8   SRNLFLSLLKGAKTQSQLTQT---HAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALF 64
           +RNL   +L+       + +    H +II    + D++ +  L +  S       AR +F
Sbjct: 60  NRNLVHEILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVF 119

Query: 65  FSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDR 124
             + +  L  +N +I  ++ N M   ++  +  +R N       FT S VLSA    CD 
Sbjct: 120 DGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMR-NEGFKFSEFTISSVLSACGVNCDA 178

Query: 125 SIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGL 184
                LH  ++ +    +L+VG AL+DLY K   +K A +VF+ M +K +V W+SM++G 
Sbjct: 179 LECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGY 238

Query: 185 MKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDH 244
           ++N  +++++ ++    R      +  ++++V+ A + +  L  G ++  +  K GF  +
Sbjct: 239 VQNKNYEEALLLYRRAQRMSLEQ-NQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSN 297

Query: 245 VYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLA 304
           V+V +  V  Y+KCG +  + ++F ++   +L   N +ISG+  + + +  + LF ++  
Sbjct: 298 VFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQ 357

Query: 305 SAERVNSSTIVGLIPVFYPFGHLHLTNCIHSF--CLKS--GIVSNSSVLTALSTVYSRLN 360
                N  T   L+ V    GH  L      F   +++  G+  N    + +  +  R  
Sbjct: 358 DGMHPNEVTFSSLLSV---CGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAG 414

Query: 361 EMEAARKLFDESSEKSLAS-WNAMIAG---YTQNGLTEEAISLFQEMQASKVAPNPVTVS 416
            +  A +L         AS W +++A    Y    L E A     E++    A N V +S
Sbjct: 415 LLSEAYELIKSIPFDPTASIWGSLLASCRVYKNLELAEVAAEKLFELEPEN-AGNHVLLS 473

Query: 417 SILSACAQLGAISLGKWVHELVKSRNF 443
           +I +A  Q        W  E+ KSR  
Sbjct: 474 NIYAANKQ--------W-EEIAKSRKL 491



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 48/135 (35%), Positives = 69/135 (51%), Gaps = 8/135 (5%)

Query: 397 ISLFQEMQASKVAP--------NPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIY 448
           IS+       +V+P        N   V  IL  CA+ GA+   K  H  +   + E ++ 
Sbjct: 38  ISVLASYDQEEVSPGRYSNEFSNRNLVHEILQLCARNGAVMEAKACHGKIIRIDLEGDVT 97

Query: 449 VSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSG 508
           +   LI+ Y+KCG +  AR++FD M  +S V+WNTMI  Y  +    EAL +F EM + G
Sbjct: 98  LLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEG 157

Query: 509 IRPSGVTFLSVLYAC 523
            + S  T  SVL AC
Sbjct: 158 FKFSEFTISSVLSAC 172


>gi|297737088|emb|CBI26289.3| unnamed protein product [Vitis vinifera]
          Length = 668

 Score =  415 bits (1066), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 234/694 (33%), Positives = 376/694 (54%), Gaps = 61/694 (8%)

Query: 107 DNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKS----- 161
           D  T    L+ +  CC +++  L   H  ++  G D  + + L  L    + + S     
Sbjct: 20  DPMTKDSCLNESLRCC-KTLNQLKQLHCQITKNGLDQ-IPSTLTKLVNAGAEIASPESLD 77

Query: 162 -ARKVFDKMPEK---DTVLW--NSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAA 215
            ARK F+   E    D  L+  NS+I G       +++I ++  M+  G T  +  +   
Sbjct: 78  YARKAFELFKEDVRSDDALFMLNSLIRGYSSAGLGREAILLYVRMLVLGVT-PNHYTFPF 136

Query: 216 VLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPD 275
           VL    ++     G+++    +K+G  + V++   L+ FY++CG ++    +F  +   +
Sbjct: 137 VLSGCTKIAAFCEGIQVHGSVVKMGLEEDVFIQNCLIHFYAECGHMDHGHKVFEGMSERN 196

Query: 276 LISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHS 335
           ++S  ++I GY    + + ++ LF ++L                                
Sbjct: 197 VVSWTSLICGYARGDRPKEAVSLFFEML-------------------------------- 224

Query: 336 FCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEE 395
                    N  ++ AL  +Y +   ++AA++LFDE  +++L  +N +++ Y + GL  E
Sbjct: 225 ---------NKVMVNALVDMYMKCGAIDAAKRLFDECVDRNLVLYNTILSNYARQGLARE 275

Query: 396 AISLFQEMQASKVAPNPVTVSSILSACAQL-----GAISLGKWVHELVKSRNFESNIYVS 450
           A+++  EM      P+ VT+ S +SA AQL     G +  G WVH  ++      ++ ++
Sbjct: 276 ALAILDEMLQQGPRPDRVTMLSAISASAQLVDLFYGKVCHGYWVHTYIEKNGIPCDMRLN 335

Query: 451 TALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIR 510
           TAL+DM+A+CG+   A ++F+ M+ +    W   I    + G+G  A  LF++ML  G++
Sbjct: 336 TALVDMFARCGDPQSAMQVFNKMTERDVSAWTAAIGTMAMEGNGEGATGLFNQMLIQGVK 395

Query: 511 PSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALE 570
           P  V F+ VL ACSH G V +G  IF S++ DHG  P  EHY CMVD+LGRAG L +A +
Sbjct: 396 PDVVLFVQVLTACSHGGQVEQGLHIF-SLMEDHGISPQIEHYGCMVDLLGRAGLLREAFD 454

Query: 571 FIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERD 630
            IK + +EP   VWG+LL AC +HK+  +A  A+E++ EL P+  G HVLLSNIY++   
Sbjct: 455 LIKSMPMEPNDVVWGSLLAACRVHKNVEMATYAAERINELAPQRAGVHVLLSNIYASAGK 514

Query: 631 YLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMRE 690
           +   A VR  ++++ + K PG + ++V G  H FTSGD+ HP+ T I  ML+++N +  +
Sbjct: 515 WTDVARVRLNLREKGVRKVPGSSSVQVNGVIHEFTSGDESHPEMTHIALMLQEMNCRFSD 574

Query: 691 AGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTA 750
           AG   +    L DV+E+EKE ++  HSEKLAIAFGLIAT     IR++KNLR+C DCH+ 
Sbjct: 575 AGHIPDLSNVLLDVDEQEKEYLLSRHSEKLAIAFGLIATGRSMPIRVVKNLRMCSDCHSF 634

Query: 751 TKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
            K  S +  R I+VRD NRFH F+ G+CSC DYW
Sbjct: 635 AKMASIIYNREIIVRDNNRFHFFRQGLCSCCDYW 668



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 119/493 (24%), Positives = 226/493 (45%), Gaps = 63/493 (12%)

Query: 16  LKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAH---RLSDFKATCYARALFFSIPKPD- 71
           L+  KT +QL Q H QI  +G     ST+TKL +    ++  ++  YAR  F  + K D 
Sbjct: 32  LRCCKTLNQLKQLHCQITKNGLDQIPSTLTKLVNAGAEIASPESLDYARKAF-ELFKEDV 90

Query: 72  -----LFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSI 126
                LF+ N +IRG+S+  + + +I  Y  +     +TP+++T+ FVLS  +       
Sbjct: 91  RSDDALFMLNSLIRGYSSAGLGREAILLYVRMLV-LGVTPNHYTFPFVLSGCTKIAAFCE 149

Query: 127 GVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMK 186
           G+ +HG  +  G   D+F+   L+  Y +   +    KVF+ M E++ V W S+I G  +
Sbjct: 150 GIQVHGSVVKMGLEEDVFIQNCLIHFYAECGHMDHGHKVFEGMSERNVVSWTSLICGYAR 209

Query: 187 NCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVY 246
               ++++ +F +M+                                             
Sbjct: 210 GDRPKEAVSLFFEMLNK------------------------------------------V 227

Query: 247 VLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASA 306
           ++  LV  Y KCG ++ A+ LF + V  +L+  N ++S Y   G    +L +  ++L   
Sbjct: 228 MVNALVDMYMKCGAIDAAKRLFDECVDRNLVLYNTILSNYARQGLAREALAILDEMLQQG 287

Query: 307 ERVNSSTIVG-------LIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRL 359
            R +  T++        L+ +FY  G +     +H++  K+GI  +  + TAL  +++R 
Sbjct: 288 PRPDRVTMLSAISASAQLVDLFY--GKVCHGYWVHTYIEKNGIPCDMRLNTALVDMFARC 345

Query: 360 NEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSIL 419
            + ++A ++F++ +E+ +++W A I      G  E A  LF +M    V P+ V    +L
Sbjct: 346 GDPQSAMQVFNKMTERDVSAWTAAIGTMAMEGNGEGATGLFNQMLIQGVKPDVVLFVQVL 405

Query: 420 SACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMS-HKSE 478
           +AC+  G +  G  +  L++       I     ++D+  + G + EA +L   M    ++
Sbjct: 406 TACSHGGQVEQGLHIFSLMEDHGISPQIEHYGCMVDLLGRAGLLREAFDLIKSMPMEPND 465

Query: 479 VTWNTMISGYGLH 491
           V W ++++   +H
Sbjct: 466 VVWGSLLAACRVH 478


>gi|449520177|ref|XP_004167110.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g25360-like [Cucumis sativus]
          Length = 797

 Score =  415 bits (1066), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 250/768 (32%), Positives = 385/768 (50%), Gaps = 108/768 (14%)

Query: 125 SIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPE------------- 171
           S+   +H H I SG+         L+++Y K S +  AR++F+++P              
Sbjct: 30  SLARAVHAHMIASGFKPRGHFLNRLLEMYCKSSNLVYARQLFEEIPNPDAIARTTLITAY 89

Query: 172 --------------------KDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDST 211
                               +D+V +N+MI+G   N     ++ +F  M R+     D T
Sbjct: 90  CALGNLELGREIFNGTPLYMRDSVFYNAMITGYAHNGDGHSALELFRAMRRDDFRPDDFT 149

Query: 212 SVAAVLPAVAEVQELRLGMEIQCLGLKLGFH-DHVYVLTGLVSFYSK--------CGEVE 262
             + +   V  V   +   ++ C  +K G       VL  L+S Y K        C  + 
Sbjct: 150 FTSVLSALVLFVGNEQQCGQMHCAVVKTGMGCVSSSVLNALLSVYVKRASELGISCSAMV 209

Query: 263 RAELLFRDIVRPDLISC-------------------------------NAMISGYTCNGK 291
            A  LF ++ + D ++                                NAMISGY   G 
Sbjct: 210 SARKLFDEMPKRDELTWTTMITGYVRNDDLNGAREVFEAMVENLGAAWNAMISGYVHCGC 269

Query: 292 TESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSS---- 347
            + +L L R++     + +  T   +I      G   +   +H++ LK+ +  N S    
Sbjct: 270 FQEALTLCRKMRFLGIQFDDITYTTIISACANVGSFQMGKQVHAYILKNELNPNHSFCLS 329

Query: 348 VLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYT------------------- 388
           V  AL T+Y + N+++ ARK+F     +++ +WNA+++GY                    
Sbjct: 330 VSNALITLYCKNNKVDEARKIFYAMPVRNIITWNAILSGYVNAGRMEEAKSFFEEMPVKN 389

Query: 389 ------------QNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHE 436
                       QNG  +E + LF++M+     P     +  L+AC+ LGA+  G+ +H 
Sbjct: 390 LLTLTVMISGLAQNGFGDEGLKLFKQMRLDGFEPCDFAFAGALTACSVLGALENGRQLHA 449

Query: 437 LVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLE 496
            +    +ES++ V  A+I MYAKCG +  A  +F  M     V+WN+MI+  G HGHG++
Sbjct: 450 QLVHLGYESSLSVGNAMISMYAKCGVVEAAESVFVTMPSVDLVSWNSMIAALGQHGHGVK 509

Query: 497 ALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMV 556
           A++LF +ML  G+ P  +TFL+VL ACSHAGLV +G   F SM+  +G  P  +HYA MV
Sbjct: 510 AIELFDQMLKEGVFPDRITFLTVLTACSHAGLVEKGRHYFNSMLESYGITPCEDHYARMV 569

Query: 557 DILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVG 616
           D+  RAG    A   I  +  +PG  VW ALL  C IH + +L   A+E+LF+L P+N G
Sbjct: 570 DLFCRAGMFSYARIVIDSMPSKPGAPVWEALLAGCRIHGNMDLGIEAAEQLFKLMPQNDG 629

Query: 617 YHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTA 676
            +VLLSNIY+    + + A VR++++ + + K P C+ IEV    HVF   D +HP+  +
Sbjct: 630 TYVLLSNIYADVGRWNEVAKVRKLMRDQAVRKEPACSWIEVENKVHVFMVDDDVHPEVLS 689

Query: 677 IYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIR 736
           +Y  LE+L  +M++ G+  +T   LHD+E E+KE  +  HSEKLA+ FG++   PG  +R
Sbjct: 690 VYRYLEQLGLEMKKLGYIPDTKFVLHDMEYEQKEHALSTHSEKLAVGFGIMKLPPGATVR 749

Query: 737 IIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           + KN+R+C DCH A KF+SKV  R I+VRD  RFHHFK G CSC DYW
Sbjct: 750 VFKNIRICGDCHNAFKFMSKVARREIIVRDRKRFHHFKNGDCSCRDYW 797



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 143/596 (23%), Positives = 243/596 (40%), Gaps = 125/596 (20%)

Query: 28  THAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLF-------------- 73
            HA +I  GF+     + +L           YAR LF  IP PD                
Sbjct: 35  VHAHMIASGFKPRGHFLNRLLEMYCKSSNLVYARQLFEEIPNPDAIARTTLITAYCALGN 94

Query: 74  -------------------LFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFV 114
                               +N +I G+++N    S++  +  +R++    PD+FT++ V
Sbjct: 95  LELGREIFNGTPLYMRDSVFYNAMITGYAHNGDGHSALELFRAMRRDD-FRPDDFTFTSV 153

Query: 115 LSA-------ASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFK--------FSWV 159
           LSA          C      V+  G   VS       V  AL+ +Y K         S +
Sbjct: 154 LSALVLFVGNEQQCGQMHCAVVKTGMGCVSSS-----VLNALLSVYVKRASELGISCSAM 208

Query: 160 KSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRN-GGTW----------- 207
            SARK+FD+MP++D + W +MI+G ++N     +  VF  MV N G  W           
Sbjct: 209 VSARKLFDEMPKRDELTWTTMITGYVRNDDLNGAREVFEAMVENLGAAWNAMISGYVHCG 268

Query: 208 ------------------LDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFH-DHVYVL 248
                              D  +   ++ A A V   ++G ++    LK   + +H + L
Sbjct: 269 CFQEALTLCRKMRFLGIQFDDITYTTIISACANVGSFQMGKQVHAYILKNELNPNHSFCL 328

Query: 249 T---GLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESS---------- 295
           +    L++ Y K  +V+ A  +F  +   ++I+ NA++SGY   G+ E +          
Sbjct: 329 SVSNALITLYCKNNKVDEARKIFYAMPVRNIITWNAILSGYVNAGRMEEAKSFFEEMPVK 388

Query: 296 ---------------------LRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIH 334
                                L+LF+Q+             G +      G L     +H
Sbjct: 389 NLLTLTVMISGLAQNGFGDEGLKLFKQMRLDGFEPCDFAFAGALTACSVLGALENGRQLH 448

Query: 335 SFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTE 394
           +  +  G  S+ SV  A+ ++Y++   +EAA  +F       L SWN+MIA   Q+G   
Sbjct: 449 AQLVHLGYESSLSVGNAMISMYAKCGVVEAAESVFVTMPSVDLVSWNSMIAALGQHGHGV 508

Query: 395 EAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGK-WVHELVKSRNFESNIYVSTAL 453
           +AI LF +M    V P+ +T  ++L+AC+  G +  G+ + + +++S            +
Sbjct: 509 KAIELFDQMLKEGVFPDRITFLTVLTACSHAGLVEKGRHYFNSMLESYGITPCEDHYARM 568

Query: 454 IDMYAKCGNIVEARELFDLMSHKSEV-TWNTMISGYGLHGH---GLEAL-QLFSEM 504
           +D++ + G    AR + D M  K     W  +++G  +HG+   G+EA  QLF  M
Sbjct: 569 VDLFCRAGMFSYARIVIDSMPSKPGAPVWEALLAGCRIHGNMDLGIEAAEQLFKLM 624



 Score = 52.4 bits (124), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 36/130 (27%), Positives = 54/130 (41%), Gaps = 33/130 (25%)

Query: 426 GAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSH---------- 475
            + SL + VH  + +  F+   +    L++MY K  N+V AR+LF+ + +          
Sbjct: 27  ASFSLARAVHAHMIASGFKPRGHFLNRLLEMYCKSSNLVYARQLFEEIPNPDAIARTTLI 86

Query: 476 -----------------------KSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPS 512
                                  +  V +N MI+GY  +G G  AL+LF  M     RP 
Sbjct: 87  TAYCALGNLELGREIFNGTPLYMRDSVFYNAMITGYAHNGDGHSALELFRAMRRDDFRPD 146

Query: 513 GVTFLSVLYA 522
             TF SVL A
Sbjct: 147 DFTFTSVLSA 156


>gi|116792842|gb|ABK26521.1| unknown [Picea sitchensis]
          Length = 370

 Score =  415 bits (1066), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 199/370 (53%), Positives = 252/370 (68%)

Query: 415 VSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMS 474
           ++ IL ACA + A+  GK VH  +    FE ++ VS  L+DMY KCG I +A+E+F  + 
Sbjct: 1   MAGILRACASVAALEQGKQVHADIIKIGFELDVSVSNGLVDMYGKCGRIEDAQEVFSKLL 60

Query: 475 HKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDE 534
                +WN MISG   HG G EA+ LF +ML +G++P+ +TF+ VL  CSHAGLV EG  
Sbjct: 61  EPDVASWNAMISGLAQHGCGKEAVLLFEQMLQTGVKPNQITFVVVLSGCSHAGLVDEGRN 120

Query: 535 IFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIH 594
            F SM  DHG  P AEHY+CMVD+ GRAG L++AL FI  + VEP  +VWG+LLGAC +H
Sbjct: 121 YFDSMTRDHGISPKAEHYSCMVDLFGRAGCLDEALNFINQMPVEPNASVWGSLLGACRVH 180

Query: 595 KDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTL 654
            +  LA  A E+L EL PEN G +VLLSNIY+A   +  A  VR+++K R + K PGC+ 
Sbjct: 181 GNIELAERAVEQLIELTPENPGTYVLLSNIYAAAGRWDDAGKVRKMMKDRSVKKEPGCSW 240

Query: 655 IEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMK 714
           IEV    H F  GD  HPQ   IY  LE L  +M+ AG+   T   LHDVEEE+KE ++ 
Sbjct: 241 IEVQNKVHPFIVGDSSHPQIEEIYETLETLTLQMKAAGYIPNTNFVLHDVEEEQKEWILG 300

Query: 715 VHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFK 774
            HSEKLAIAFG+I+T PGT IR++KNLRVC DCHTATKFIS++  R IV+RD +RFHHFK
Sbjct: 301 HHSEKLAIAFGIISTPPGTTIRVVKNLRVCGDCHTATKFISRIVSREIVLRDTHRFHHFK 360

Query: 775 GGVCSCGDYW 784
            G CSCGDYW
Sbjct: 361 DGQCSCGDYW 370



 Score = 86.3 bits (212), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 53/206 (25%), Positives = 103/206 (50%), Gaps = 7/206 (3%)

Query: 333 IHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGL 392
           +H+  +K G   + SV   L  +Y +   +E A+++F +  E  +ASWNAMI+G  Q+G 
Sbjct: 20  VHADIIKIGFELDVSVSNGLVDMYGKCGRIEDAQEVFSKLLEPDVASWNAMISGLAQHGC 79

Query: 393 TEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGK-WVHELVKSRNFESNIYVST 451
            +EA+ LF++M  + V PN +T   +LS C+  G +  G+ +   + +           +
Sbjct: 80  GKEAVLLFEQMLQTGVKPNQITFVVVLSGCSHAGLVDEGRNYFDSMTRDHGISPKAEHYS 139

Query: 452 ALIDMYAKCGNIVEARELFDLMSHKSEVT-WNTMISGYGLHGHGLEALQLFSEMLH-SGI 509
            ++D++ + G + EA    + M  +   + W +++    +HG+   A +   +++  +  
Sbjct: 140 CMVDLFGRAGCLDEALNFINQMPVEPNASVWGSLLGACRVHGNIELAERAVEQLIELTPE 199

Query: 510 RPSGVTFLSVLYACS----HAGLVRE 531
            P     LS +YA +     AG VR+
Sbjct: 200 NPGTYVLLSNIYAAAGRWDDAGKVRK 225



 Score = 85.9 bits (211), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 73/271 (26%), Positives = 118/271 (43%), Gaps = 46/271 (16%)

Query: 213 VAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIV 272
           +A +L A A V  L  G ++    +K+GF   V V  GLV  Y KCG +E A+ +F  ++
Sbjct: 1   MAGILRACASVAALEQGKQVHADIIKIGFELDVSVSNGLVDMYGKCGRIEDAQEVFSKLL 60

Query: 273 RPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNC 332
            PD+ S NAMISG   +G  + ++ LF Q+L +  + N  T V +           L+ C
Sbjct: 61  EPDVASWNAMISGLAQHGCGKEAVLLFEQMLQTGVKPNQITFVVV-----------LSGC 109

Query: 333 IHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLAS-----WNAMIAGY 387
            H+  +  G                        R  FD  +     S     ++ M+  +
Sbjct: 110 SHAGLVDEG------------------------RNYFDSMTRDHGISPKAEHYSCMVDLF 145

Query: 388 TQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLG-KWVHELVKSRNFESN 446
            + G  +EA++   +M    V PN     S+L AC   G I L  + V +L++       
Sbjct: 146 GRAGCLDEALNFINQM---PVEPNASVWGSLLGACRVHGNIELAERAVEQLIELTPENPG 202

Query: 447 IYVSTALIDMYAKCGNIVEARELFDLMSHKS 477
            YV   L ++YA  G   +A ++  +M  +S
Sbjct: 203 TYV--LLSNIYAAAGRWDDAGKVRKMMKDRS 231



 Score = 59.7 bits (143), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 30/91 (32%), Positives = 52/91 (57%)

Query: 114 VLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKD 173
           +L A ++      G  +H   I  G+  D+ V   LVD+Y K   ++ A++VF K+ E D
Sbjct: 4   ILRACASVAALEQGKQVHADIIKIGFELDVSVSNGLVDMYGKCGRIEDAQEVFSKLLEPD 63

Query: 174 TVLWNSMISGLMKNCCFQDSIWVFGDMVRNG 204
              WN+MISGL ++ C ++++ +F  M++ G
Sbjct: 64  VASWNAMISGLAQHGCGKEAVLLFEQMLQTG 94



 Score = 48.5 bits (114), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 38/165 (23%), Positives = 71/165 (43%), Gaps = 13/165 (7%)

Query: 24  QLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFS 83
           Q  Q HA II  GF+ D+S    L            A+ +F  + +PD+  +N +I G +
Sbjct: 16  QGKQVHADIIKIGFELDVSVSNGLVDMYGKCGRIEDAQEVFSKLLEPDVASWNAMISGLA 75

Query: 84  NNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDL 143
            +   K ++  +  + + T + P+  T+  VLS  S       G++  G         D 
Sbjct: 76  QHGCGKEAVLLFEQMLQ-TGVKPNQITFVVVLSGCS-----HAGLVDEGRNYFDSMTRDH 129

Query: 144 FVG------AALVDLYFKFSWVKSARKVFDKMP-EKDTVLWNSMI 181
            +       + +VDL+ +   +  A    ++MP E +  +W S++
Sbjct: 130 GISPKAEHYSCMVDLFGRAGCLDEALNFINQMPVEPNASVWGSLL 174


>gi|297740626|emb|CBI30808.3| unnamed protein product [Vitis vinifera]
          Length = 660

 Score =  414 bits (1065), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 238/727 (32%), Positives = 383/727 (52%), Gaps = 82/727 (11%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           AR +F  +  PD++L+ ++I G++ N     ++  +  +        D  +++ ++    
Sbjct: 14  ARTVFDKVSFPDVYLYTMMITGYARNYRFDHALQLFYEMP-----VKDVVSWNSMIKGCF 68

Query: 120 ACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNS 179
            C D ++                                   ARK+FD+MPE+  V W +
Sbjct: 69  DCADLTM-----------------------------------ARKLFDEMPERSVVSWTT 93

Query: 180 MISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKL 239
           MI+G ++          FG +                     EV E         L  K+
Sbjct: 94  MINGFLQ----------FGKI---------------------EVAE--------GLFYKM 114

Query: 240 GFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLF 299
            F D +     ++  Y   G VE    LF+++   ++IS  +MI G   +G++E +L LF
Sbjct: 115 PFRD-IAAWNSMIYGYCCNGRVEDGLRLFQEMPCRNVISWTSMIGGLDQHGRSEEALGLF 173

Query: 300 RQLLASAERVN--SSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYS 357
           RQ++     V   SST   +I        L+    IH+   K G   ++ +  AL T Y+
Sbjct: 174 RQMMGCGVEVKPTSSTYCCVITACANASALYQGVQIHAHVFKLGYSFDAYISAALITFYA 233

Query: 358 RLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSS 417
              +ME + ++F      ++  W A++ GY  N   E+A+ +F EM    V PN  + +S
Sbjct: 234 NCKQMEDSLRVFHGKLHMNVVIWTALVTGYGLNCKHEDALKVFGEMMREGVLPNQSSFTS 293

Query: 418 ILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKS 477
            L++C  L A+  G+ +H        E++++V  +LI MY +CGN+ +   +F  +S K+
Sbjct: 294 ALNSCCGLEALDWGREIHTAAVKLGLETDVFVGNSLIVMYYRCGNLNDGVVIFKRISKKN 353

Query: 478 EVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQ 537
            V+WN++I G   HG G+ AL  F++M+ S + P  +TF  +L ACSH+G+ ++G  +F+
Sbjct: 354 IVSWNSVIVGCAQHGCGMWALAFFNQMVRSMVEPDEITFTGLLSACSHSGMSQKGRCLFK 413

Query: 538 SMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDT 597
               +   +   +HYACMVDILGR+G+LE+A E I+ + V+    VW  LL AC +H   
Sbjct: 414 YFSENKSAEVKLDHYACMVDILGRSGKLEEAEELIRNMPVKANSMVWLVLLSACTMHSKL 473

Query: 598 NLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEV 657
            +A  A++ + +L+P     +VLLSN+Y++   +   + +R+ +K+R + K PG + I +
Sbjct: 474 EVAERAAKCIIDLEPHCSSAYVLLSNLYASASRWSDVSRIRREMKQRGITKQPGRSWITI 533

Query: 658 GGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHS 717
            G  + F SGD+ HP S  IY  LE L GK++E G+  +   ALHDVE+E+KE+M+  HS
Sbjct: 534 KGWRNEFLSGDRSHPSSDRIYQKLEWLGGKLKELGYVPDQRFALHDVEDEQKEVMLSYHS 593

Query: 718 EKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGV 777
           E+LAI FGLI+T  G+ I ++KNLRVC DCH+A K I+K+  R I+VRD+ RFHHF  G 
Sbjct: 594 ERLAIGFGLISTVEGSTITVMKNLRVCGDCHSAIKLIAKIVRRKIIVRDSTRFHHFMDGR 653

Query: 778 CSCGDYW 784
           CSCGDYW
Sbjct: 654 CSCGDYW 660



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 105/441 (23%), Positives = 187/441 (42%), Gaps = 67/441 (15%)

Query: 14  SLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLF 73
           S++KG    + LT    ++     +  + + T + +    F     A  LF+ +P  D+ 
Sbjct: 62  SMIKGCFDCADLTMAR-KLFDEMPERSVVSWTTMINGFLQFGKIEVAEGLFYKMPFRDIA 120

Query: 74  LFNVIIRGFSNN-----------EMPKSSICFYT--------HLRKNTAL---------- 104
            +N +I G+  N           EMP  ++  +T        H R   AL          
Sbjct: 121 AWNSMIYGYCCNGRVEDGLRLFQEMPCRNVISWTSMIGGLDQHGRSEEALGLFRQMMGCG 180

Query: 105 ---TPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKS 161
               P + TY  V++A +       GV +H H    GY  D ++ AAL+  Y     ++ 
Sbjct: 181 VEVKPTSSTYCCVITACANASALYQGVQIHAHVFKLGYSFDAYISAALITFYANCKQMED 240

Query: 162 ARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVA 221
           + +VF      + V+W ++++G   NC  +D++ VFG+M+R  G   + +S  + L +  
Sbjct: 241 SLRVFHGKLHMNVVIWTALVTGYGLNCKHEDALKVFGEMMRE-GVLPNQSSFTSALNSCC 299

Query: 222 EVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNA 281
            ++ L  G EI    +KLG    V+V   L+  Y +CG +    ++F+ I + +++S N+
Sbjct: 300 GLEALDWGREIHTAAVKLGLETDVFVGNSLIVMYYRCGNLNDGVVIFKRISKKNIVSWNS 359

Query: 282 MISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSG 341
           +I G   +G    +L  F Q++ S    +  T  GL           L+ C HS   + G
Sbjct: 360 VIVGCAQHGCGMWALAFFNQMVRSMVEPDEITFTGL-----------LSACSHSGMSQKG 408

Query: 342 IVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQ 401
                        ++   +E        ++S+E  L  +  M+    ++G  EEA  L +
Sbjct: 409 -----------RCLFKYFSE--------NKSAEVKLDHYACMVDILGRSGKLEEAEELIR 449

Query: 402 EMQASKVAPNPVTVSSILSAC 422
            M    V  N +    +LSAC
Sbjct: 450 NM---PVKANSMVWLVLLSAC 467



 Score = 76.3 bits (186), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 61/264 (23%), Positives = 115/264 (43%), Gaps = 35/264 (13%)

Query: 354 TVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPV 413
           T + R   ++ AR +FD+ S   +  +  MI GY +N   + A+ LF EM    V    V
Sbjct: 3   TDHLRNQRIDEARTVFDKVSFPDVYLYTMMITGYARNYRFDHALQLFYEMPVKDV----V 58

Query: 414 TVSSILSACAQLGAISLGKWVHELVKSRNFES---------------------------N 446
           + +S++  C     +++ + + + +  R+  S                           +
Sbjct: 59  SWNSMIKGCFDCADLTMARKLFDEMPERSVVSWTTMINGFLQFGKIEVAEGLFYKMPFRD 118

Query: 447 IYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLH 506
           I    ++I  Y   G + +   LF  M  ++ ++W +MI G   HG   EAL LF +M+ 
Sbjct: 119 IAAWNSMIYGYCCNGRVEDGLRLFQEMPCRNVISWTSMIGGLDQHGRSEEALGLFRQMMG 178

Query: 507 SG--IRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQ 564
            G  ++P+  T+  V+ AC++A  + +G +I  + +   G+   A   A ++       Q
Sbjct: 179 CGVEVKPTSSTYCCVITACANASALYQGVQI-HAHVFKLGYSFDAYISAALITFYANCKQ 237

Query: 565 LEKALEFIKGLAVEPGPAVWGALL 588
           +E +L    G  +     +W AL+
Sbjct: 238 MEDSLRVFHG-KLHMNVVIWTALV 260


>gi|359483597|ref|XP_002272690.2| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
           mitochondrial [Vitis vinifera]
          Length = 676

 Score =  414 bits (1065), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 238/727 (32%), Positives = 383/727 (52%), Gaps = 82/727 (11%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           AR +F  +  PD++L+ ++I G++ N     ++  +  +        D  +++ ++    
Sbjct: 30  ARTVFDKVSFPDVYLYTMMITGYARNYRFDHALQLFYEMP-----VKDVVSWNSMIKGCF 84

Query: 120 ACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNS 179
            C D ++                                   ARK+FD+MPE+  V W +
Sbjct: 85  DCADLTM-----------------------------------ARKLFDEMPERSVVSWTT 109

Query: 180 MISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKL 239
           MI+G ++          FG +                     EV E         L  K+
Sbjct: 110 MINGFLQ----------FGKI---------------------EVAE--------GLFYKM 130

Query: 240 GFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLF 299
            F D +     ++  Y   G VE    LF+++   ++IS  +MI G   +G++E +L LF
Sbjct: 131 PFRD-IAAWNSMIYGYCCNGRVEDGLRLFQEMPCRNVISWTSMIGGLDQHGRSEEALGLF 189

Query: 300 RQLLASAERVN--SSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYS 357
           RQ++     V   SST   +I        L+    IH+   K G   ++ +  AL T Y+
Sbjct: 190 RQMMGCGVEVKPTSSTYCCVITACANASALYQGVQIHAHVFKLGYSFDAYISAALITFYA 249

Query: 358 RLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSS 417
              +ME + ++F      ++  W A++ GY  N   E+A+ +F EM    V PN  + +S
Sbjct: 250 NCKQMEDSLRVFHGKLHMNVVIWTALVTGYGLNCKHEDALKVFGEMMREGVLPNQSSFTS 309

Query: 418 ILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKS 477
            L++C  L A+  G+ +H        E++++V  +LI MY +CGN+ +   +F  +S K+
Sbjct: 310 ALNSCCGLEALDWGREIHTAAVKLGLETDVFVGNSLIVMYYRCGNLNDGVVIFKRISKKN 369

Query: 478 EVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQ 537
            V+WN++I G   HG G+ AL  F++M+ S + P  +TF  +L ACSH+G+ ++G  +F+
Sbjct: 370 IVSWNSVIVGCAQHGCGMWALAFFNQMVRSMVEPDEITFTGLLSACSHSGMSQKGRCLFK 429

Query: 538 SMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDT 597
               +   +   +HYACMVDILGR+G+LE+A E I+ + V+    VW  LL AC +H   
Sbjct: 430 YFSENKSAEVKLDHYACMVDILGRSGKLEEAEELIRNMPVKANSMVWLVLLSACTMHSKL 489

Query: 598 NLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEV 657
            +A  A++ + +L+P     +VLLSN+Y++   +   + +R+ +K+R + K PG + I +
Sbjct: 490 EVAERAAKCIIDLEPHCSSAYVLLSNLYASASRWSDVSRIRREMKQRGITKQPGRSWITI 549

Query: 658 GGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHS 717
            G  + F SGD+ HP S  IY  LE L GK++E G+  +   ALHDVE+E+KE+M+  HS
Sbjct: 550 KGWRNEFLSGDRSHPSSDRIYQKLEWLGGKLKELGYVPDQRFALHDVEDEQKEVMLSYHS 609

Query: 718 EKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGV 777
           E+LAI FGLI+T  G+ I ++KNLRVC DCH+A K I+K+  R I+VRD+ RFHHF  G 
Sbjct: 610 ERLAIGFGLISTVEGSTITVMKNLRVCGDCHSAIKLIAKIVRRKIIVRDSTRFHHFMDGR 669

Query: 778 CSCGDYW 784
           CSCGDYW
Sbjct: 670 CSCGDYW 676



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 105/441 (23%), Positives = 187/441 (42%), Gaps = 67/441 (15%)

Query: 14  SLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLF 73
           S++KG    + LT    ++     +  + + T + +    F     A  LF+ +P  D+ 
Sbjct: 78  SMIKGCFDCADLTMAR-KLFDEMPERSVVSWTTMINGFLQFGKIEVAEGLFYKMPFRDIA 136

Query: 74  LFNVIIRGFSNN-----------EMPKSSICFYT--------HLRKNTAL---------- 104
            +N +I G+  N           EMP  ++  +T        H R   AL          
Sbjct: 137 AWNSMIYGYCCNGRVEDGLRLFQEMPCRNVISWTSMIGGLDQHGRSEEALGLFRQMMGCG 196

Query: 105 ---TPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKS 161
               P + TY  V++A +       GV +H H    GY  D ++ AAL+  Y     ++ 
Sbjct: 197 VEVKPTSSTYCCVITACANASALYQGVQIHAHVFKLGYSFDAYISAALITFYANCKQMED 256

Query: 162 ARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVA 221
           + +VF      + V+W ++++G   NC  +D++ VFG+M+R  G   + +S  + L +  
Sbjct: 257 SLRVFHGKLHMNVVIWTALVTGYGLNCKHEDALKVFGEMMRE-GVLPNQSSFTSALNSCC 315

Query: 222 EVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNA 281
            ++ L  G EI    +KLG    V+V   L+  Y +CG +    ++F+ I + +++S N+
Sbjct: 316 GLEALDWGREIHTAAVKLGLETDVFVGNSLIVMYYRCGNLNDGVVIFKRISKKNIVSWNS 375

Query: 282 MISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSG 341
           +I G   +G    +L  F Q++ S    +  T  GL           L+ C HS   + G
Sbjct: 376 VIVGCAQHGCGMWALAFFNQMVRSMVEPDEITFTGL-----------LSACSHSGMSQKG 424

Query: 342 IVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQ 401
                        ++   +E        ++S+E  L  +  M+    ++G  EEA  L +
Sbjct: 425 -----------RCLFKYFSE--------NKSAEVKLDHYACMVDILGRSGKLEEAEELIR 465

Query: 402 EMQASKVAPNPVTVSSILSAC 422
            M    V  N +    +LSAC
Sbjct: 466 NM---PVKANSMVWLVLLSAC 483



 Score = 76.6 bits (187), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 61/267 (22%), Positives = 117/267 (43%), Gaps = 35/267 (13%)

Query: 351 ALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAP 410
           ++ T + R   ++ AR +FD+ S   +  +  MI GY +N   + A+ LF EM    V  
Sbjct: 16  SMITDHLRNQRIDEARTVFDKVSFPDVYLYTMMITGYARNYRFDHALQLFYEMPVKDV-- 73

Query: 411 NPVTVSSILSACAQLGAISLGKWVHELVKSRNFES------------------------- 445
             V+ +S++  C     +++ + + + +  R+  S                         
Sbjct: 74  --VSWNSMIKGCFDCADLTMARKLFDEMPERSVVSWTTMINGFLQFGKIEVAEGLFYKMP 131

Query: 446 --NIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSE 503
             +I    ++I  Y   G + +   LF  M  ++ ++W +MI G   HG   EAL LF +
Sbjct: 132 FRDIAAWNSMIYGYCCNGRVEDGLRLFQEMPCRNVISWTSMIGGLDQHGRSEEALGLFRQ 191

Query: 504 MLHSG--IRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGR 561
           M+  G  ++P+  T+  V+ AC++A  + +G +I  + +   G+   A   A ++     
Sbjct: 192 MMGCGVEVKPTSSTYCCVITACANASALYQGVQI-HAHVFKLGYSFDAYISAALITFYAN 250

Query: 562 AGQLEKALEFIKGLAVEPGPAVWGALL 588
             Q+E +L    G  +     +W AL+
Sbjct: 251 CKQMEDSLRVFHG-KLHMNVVIWTALV 276


>gi|147781801|emb|CAN65443.1| hypothetical protein VITISV_011420 [Vitis vinifera]
          Length = 485

 Score =  414 bits (1065), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 199/478 (41%), Positives = 306/478 (64%), Gaps = 1/478 (0%)

Query: 308 RVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARK 367
           R +  T+V L+P     G+L     +HS+  + G+  N SV  A+  +Y + +++E+A++
Sbjct: 8   RPDEVTMVSLVPACAQLGNLERGKLLHSYSKELGLDENLSVNNAILDMYCKCDDIESAQE 67

Query: 368 LFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGA 427
           +F+   EK + SW +M++G  ++G  +E+++LF++MQ  K+ P+ +T+  +LSACAQ GA
Sbjct: 68  VFNRIREKDVLSWTSMLSGLAKSGYFQESLALFRKMQLHKIEPDEITLVGVLSACAQTGA 127

Query: 428 ISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISG 487
           +  GK++H L+       ++ + TAL+DMYAKCG+I  A ++F  M  ++  TWN MI G
Sbjct: 128 LDQGKYIHLLIDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMRVRNVFTWNAMIGG 187

Query: 488 YGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKP 547
             +HGHG +A+ LF +M    + P  VTF+++L ACSHAGLV EG  +FQ+M +    +P
Sbjct: 188 LAMHGHGEDAISLFDQMEXDKLMPDDVTFIALLCACSHAGLVDEGLAMFQAMKNKFQIEP 247

Query: 548 LAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKL 607
             EHY C+VD+L RA +++ AL FI+ + ++    +W  LLGAC      +LA     ++
Sbjct: 248 RMEHYGCVVDLLCRARKVDDALAFIENMPIKANSVLWATLLGACRSGGHFDLAEKIXRRV 307

Query: 608 FELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSG 667
            EL+P++ G +V+LSN+Y+    +  A  +R+ +K + + K PGC+ IE+ G  H F +G
Sbjct: 308 IELEPDSCGRYVMLSNLYAGVSQWDHALKLRKQMKNKGIEKTPGCSWIELNGMIHQFVAG 367

Query: 668 DQLHPQSTAIYAMLEKLNGKMR-EAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGL 726
           D+ H Q+  IYAM+E++  ++  + G    T   L D+EEEEKE  + +HSEKLAIA GL
Sbjct: 368 DRSHLQTEQIYAMIEEMTRRVNLDGGHVPGTANVLFDIEEEEKEHSLFLHSEKLAIALGL 427

Query: 727 IATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           I+T  G+ IRI+KNLRVC DCH+  K  SKV  R IV RD +RFHHFK G CSC D+W
Sbjct: 428 ISTPSGSPIRIVKNLRVCNDCHSFLKVTSKVYNREIVARDRSRFHHFKEGSCSCMDFW 485



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 76/287 (26%), Positives = 145/287 (50%), Gaps = 2/287 (0%)

Query: 209 DSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLF 268
           D  ++ +++PA A++  L  G  +     +LG  +++ V   ++  Y KC ++E A+ +F
Sbjct: 10  DEVTMVSLVPACAQLGNLERGKLLHSYSKELGLDENLSVNNAILDMYCKCDDIESAQEVF 69

Query: 269 RDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLH 328
             I   D++S  +M+SG   +G  + SL LFR++       +  T+VG++      G L 
Sbjct: 70  NRIREKDVLSWTSMLSGLAKSGYFQESLALFRKMQLHKIEPDEITLVGVLSACAQTGALD 129

Query: 329 LTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYT 388
               IH    K  I  +  + TAL  +Y++   ++ A ++F     +++ +WNAMI G  
Sbjct: 130 QGKYIHLLIDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMRVRNVFTWNAMIGGLA 189

Query: 389 QNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSR-NFESNI 447
            +G  E+AISLF +M+  K+ P+ VT  ++L AC+  G +  G  + + +K++   E  +
Sbjct: 190 MHGHGEDAISLFDQMEXDKLMPDDVTFIALLCACSHAGLVDEGLAMFQAMKNKFQIEPRM 249

Query: 448 YVSTALIDMYAKCGNIVEARELFDLMSHKSE-VTWNTMISGYGLHGH 493
                ++D+  +   + +A    + M  K+  V W T++      GH
Sbjct: 250 EHYGCVVDLLCRARKVDDALAFIENMPIKANSVLWATLLGACRSGGH 296



 Score =  103 bits (256), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 67/215 (31%), Positives = 112/215 (52%), Gaps = 1/215 (0%)

Query: 104 LTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSAR 163
           L PD  T   ++ A +   +   G LLH ++   G   +L V  A++D+Y K   ++SA+
Sbjct: 7   LRPDEVTMVSLVPACAQLGNLERGKLLHSYSKELGLDENLSVNNAILDMYCKCDDIESAQ 66

Query: 164 KVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEV 223
           +VF+++ EKD + W SM+SGL K+  FQ+S+ +F  M  +     D  ++  VL A A+ 
Sbjct: 67  EVFNRIREKDVLSWTSMLSGLAKSGYFQESLALFRKMQLH-KIEPDEITLVGVLSACAQT 125

Query: 224 QELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMI 283
             L  G  I  L  K   +  + + T LV  Y+KCG ++ A  +FR +   ++ + NAMI
Sbjct: 126 GALDQGKYIHLLIDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMRVRNVFTWNAMI 185

Query: 284 SGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLI 318
            G   +G  E ++ LF Q+       +  T + L+
Sbjct: 186 GGLAMHGHGEDAISLFDQMEXDKLMPDDVTFIALL 220


>gi|225461979|ref|XP_002267354.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
           [Vitis vinifera]
          Length = 632

 Score =  414 bits (1065), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 203/422 (48%), Positives = 270/422 (63%)

Query: 363 EAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSAC 422
           E A  LF    E+++ SW +MIAGY Q G  +EAI LF +M+ + V  N VTV ++L+AC
Sbjct: 211 EGAYDLFSRMPERNVRSWTSMIAGYVQCGKAKEAIHLFAKMEEAGVKCNEVTVVAVLAAC 270

Query: 423 AQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWN 482
           A LGA+ LG  +HE      F+ N+ +S  LIDMY KCG + EA ++F+ M  ++ V+W+
Sbjct: 271 ADLGALDLGMRIHEYSNRHGFKRNVRISNTLIDMYVKCGCLEEACKVFEEMEERTVVSWS 330

Query: 483 TMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHD 542
            MI G  +HG   EAL+LFS+M   GI P+GVTF+ +L+ACSH GL+ EG   F SM  D
Sbjct: 331 AMIGGLAMHGRAEEALRLFSDMSQVGIEPNGVTFIGLLHACSHMGLISEGRRFFASMTRD 390

Query: 543 HGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARV 602
           +G  P  EHY CMVD+L RAG L +A EFI  + ++P   VWGALLGAC +HK+  +A  
Sbjct: 391 YGIIPQIEHYGCMVDLLSRAGLLHEAHEFILNMPMKPNGVVWGALLGACRVHKNVEMAEE 450

Query: 603 ASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPH 662
           A + L ELDP N GY+V+LSNIY+    +   A VR+ +K R++ K PG + I V G  H
Sbjct: 451 AIKHLLELDPLNDGYYVVLSNIYAEAGRWEDTARVRKFMKDRQVKKTPGWSSITVDGVVH 510

Query: 663 VFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAI 722
            F +G++ HP +  I+   E+L  +MR  G+   T   L D+EE EK   +  HSEKLA+
Sbjct: 511 EFVAGEESHPDTEQIFQRWEELLEEMRLKGYVPNTSVVLLDIEEGEKVKFVSRHSEKLAL 570

Query: 723 AFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGD 782
            FGL+ T   T IRI+KNLR+C DCH+A K IS +  R IVVRD NRFH F    CSC D
Sbjct: 571 VFGLMNTPAETPIRIMKNLRICEDCHSAFKLISAIVNREIVVRDRNRFHCFNDNSCSCRD 630

Query: 783 YW 784
           YW
Sbjct: 631 YW 632



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 125/494 (25%), Positives = 214/494 (43%), Gaps = 71/494 (14%)

Query: 2   SMKTPQSRNLFLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYAR 61
           ++K   S  L + LL+   +  +L Q HAQII       +  +T++    +   +  YA+
Sbjct: 21  NVKPQSSETLKIDLLRNFNSPFELRQVHAQIIKTNAPLSILPLTRVGLVCAFTPSFHYAQ 80

Query: 62  ALFFSIPK--PDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
            +F  + K  P+ F++N  ++  +  + P  +I  +  LR+   + PD FT S VL A  
Sbjct: 81  QIFKCVEKQKPETFVWNSCLKALAEGDSPIDAIMLFYRLRQYD-VCPDTFTCSSVLRACL 139

Query: 120 ACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNS 179
              D S G +LHG     G+ S+L++   +V LY     +  AR +F+KMP++D V WN 
Sbjct: 140 NLLDLSNGRILHGVVEKVGFRSNLYLQNMIVHLYASCGEMGEARLLFEKMPQRDVVTWNI 199

Query: 180 MISGLMKNCCFQDSIWVFGDMV-RNGGTW-----------------------------LD 209
           MI+ L+K    + +  +F  M  RN  +W                              +
Sbjct: 200 MIAQLIKQGDHEGAYDLFSRMPERNVRSWTSMIAGYVQCGKAKEAIHLFAKMEEAGVKCN 259

Query: 210 STSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFR 269
             +V AVL A A++  L LGM I     + GF  +V +   L+  Y KCG +E A  +F 
Sbjct: 260 EVTVVAVLAACADLGALDLGMRIHEYSNRHGFKRNVRISNTLIDMYVKCGCLEEACKVFE 319

Query: 270 DIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHL 329
           ++    ++S +AMI G   +G+ E +LRLF  +       N  T +GL            
Sbjct: 320 EMEERTVVSWSAMIGGLAMHGRAEEALRLFSDMSQVGIEPNGVTFIGL------------ 367

Query: 330 TNCIHSFCLKSGIVSNS-SVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYT 388
              +H+ C   G++S       +++  Y  + ++E                +  M+   +
Sbjct: 368 ---LHA-CSHMGLISEGRRFFASMTRDYGIIPQIE---------------HYGCMVDLLS 408

Query: 389 QNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLG-KWVHELVKSRNFESNI 447
           + GL  EA      M    + PN V   ++L AC     + +  + +  L++        
Sbjct: 409 RAGLLHEAHEFILNM---PMKPNGVVWGALLGACRVHKNVEMAEEAIKHLLELDPLNDGY 465

Query: 448 YVSTALIDMYAKCG 461
           YV   L ++YA+ G
Sbjct: 466 YV--VLSNIYAEAG 477



 Score =  135 bits (340), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 111/476 (23%), Positives = 209/476 (43%), Gaps = 76/476 (15%)

Query: 156 FSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAA 215
           F + +   K  +K  + +T +WNS +  L +     D+I +F  + R      D+ + ++
Sbjct: 76  FHYAQQIFKCVEKQ-KPETFVWNSCLKALAEGDSPIDAIMLFYRL-RQYDVCPDTFTCSS 133

Query: 216 VLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPD 275
           VL A   + +L  G  +  +  K+GF  ++Y+   +V  Y+ CGE+  A LLF  + + D
Sbjct: 134 VLRACLNLLDLSNGRILHGVVEKVGFRSNLYLQNMIVHLYASCGEMGEARLLFEKMPQRD 193

Query: 276 LISCN-------------------------------AMISGYTCNGKTESSLRLFRQLLA 304
           +++ N                               +MI+GY   GK + ++ LF ++  
Sbjct: 194 VVTWNIMIAQLIKQGDHEGAYDLFSRMPERNVRSWTSMIAGYVQCGKAKEAIHLFAKMEE 253

Query: 305 SAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEA 364
           +  + N  T+V ++      G L L   IH +  + G   N  +   L  +Y +   +E 
Sbjct: 254 AGVKCNEVTVVAVLAACADLGALDLGMRIHEYSNRHGFKRNVRISNTLIDMYVKCGCLEE 313

Query: 365 ARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQ 424
           A K+F+E  E+++ SW+AMI G   +G  EEA+ LF +M    + PN VT   +L AC+ 
Sbjct: 314 ACKVFEEMEERTVVSWSAMIGGLAMHGRAEEALRLFSDMSQVGIEPNGVTFIGLLHACSH 373

Query: 425 LGAISLG-KWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNT 483
           +G IS G ++   + +       I     ++D+ ++ G + EA E               
Sbjct: 374 MGLISEGRRFFASMTRDYGIIPQIEHYGCMVDLLSRAGLLHEAHEF-------------- 419

Query: 484 MISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDH 543
                               +L+  ++P+GV + ++L AC     V   +E  + ++   
Sbjct: 420 --------------------ILNMPMKPNGVVWGALLGACRVHKNVEMAEEAIKHLLE-- 457

Query: 544 GFKPLAE-HYACMVDILGRAGQLE---KALEFIKGLAVEPGPAVWGALLGACMIHK 595
              PL + +Y  + +I   AG+ E   +  +F+K   V+  P  W ++    ++H+
Sbjct: 458 -LDPLNDGYYVVLSNIYAEAGRWEDTARVRKFMKDRQVKKTPG-WSSITVDGVVHE 511



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 79/295 (26%), Positives = 137/295 (46%), Gaps = 35/295 (11%)

Query: 333 IHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFD--ESSEKSLASWNAMIAGYTQN 390
           +H+  +K+    +   LT +  V +       A+++F   E  +     WN+ +    + 
Sbjct: 47  VHAQIIKTNAPLSILPLTRVGLVCAFTPSFHYAQQIFKCVEKQKPETFVWNSCLKALAEG 106

Query: 391 GLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVS 450
               +AI LF  ++   V P+  T SS+L AC  L  +S G+ +H +V+   F SN+Y+ 
Sbjct: 107 DSPIDAIMLFYRLRQYDVCPDTFTCSSVLRACLNLLDLSNGRILHGVVEKVGFRSNLYLQ 166

Query: 451 TALIDMYAKCGNIVEARELFDLMSHKSEVTWN---------------------------- 482
             ++ +YA CG + EAR LF+ M  +  VTWN                            
Sbjct: 167 NMIVHLYASCGEMGEARLLFEKMPQRDVVTWNIMIAQLIKQGDHEGAYDLFSRMPERNVR 226

Query: 483 ---TMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSM 539
              +MI+GY   G   EA+ LF++M  +G++ + VT ++VL AC+  G +  G  I +  
Sbjct: 227 SWTSMIAGYVQCGKAKEAIHLFAKMEEAGVKCNEVTVVAVLAACADLGALDLGMRIHEYS 286

Query: 540 IHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIH 594
            + HGFK        ++D+  + G LE+A +  + +  E     W A++G   +H
Sbjct: 287 -NRHGFKRNVRISNTLIDMYVKCGCLEEACKVFEEME-ERTVVSWSAMIGGLAMH 339


>gi|449446466|ref|XP_004140992.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g04780-like [Cucumis sativus]
          Length = 638

 Score =  414 bits (1065), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 215/572 (37%), Positives = 335/572 (58%)

Query: 213 VAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIV 272
           V  +L   A+ + L  G       L +G    +     L++ YSKCG V+ A  +F ++ 
Sbjct: 67  VHEILKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSKCGSVDFARQVFDEMP 126

Query: 273 RPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNC 332
              L+S N MI   T NG+   +L L  Q+       +  TI  ++        L     
Sbjct: 127 SRSLVSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCALSECQL 186

Query: 333 IHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGL 392
           +H+F +K+ +  N  V TAL  VY++   M+ A  +F+   ++S+ +W++M AGY QN +
Sbjct: 187 LHAFAIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMPDRSVVTWSSMAAGYVQNEM 246

Query: 393 TEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTA 452
            E+A++LF++   + +  +   +SS++ ACA L A+  GK ++ L+    F SNI+V+++
Sbjct: 247 YEQALALFRKAWETGLKHDQFLMSSVICACAGLAAMIEGKQMNALLSKSGFCSNIFVASS 306

Query: 453 LIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPS 512
           LIDMYAKCG I E+ ++F  +  ++ V WN MISG   H   LE + LF +M   G+ P+
Sbjct: 307 LIDMYAKCGGIEESYKVFRDVEKRNVVLWNAMISGLSRHARSLEVMILFEKMQQMGLSPN 366

Query: 513 GVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFI 572
            VTF+SVL AC H GLVR+G + F  M  +H   P   HY+CMVD L RAGQ+ +A + I
Sbjct: 367 DVTFVSVLSACGHMGLVRKGQKYFDLMTKEHHLAPNVFHYSCMVDTLSRAGQIFEAYDLI 426

Query: 573 KGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYL 632
             L      ++WG+LL +C  H +  LA VA++KLF+++P N G ++LLSN+Y+A   + 
Sbjct: 427 SKLPFNASASMWGSLLASCRTHGNLELAEVAAKKLFDIEPHNSGNYLLLSNMYAANGKWD 486

Query: 633 QAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAG 692
           + A +R+++K+  + K  G + IE+    H+F  G++ HP+   IY+ L ++  ++++ G
Sbjct: 487 EVAKMRKLLKESDVKKERGKSWIEIKDKVHLFMVGERNHPKIVEIYSKLNEVMDELQKLG 546

Query: 693 FQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATK 752
           ++ ET   LH V E  K+ +++ HSEKLA   GL+   P   IRI+KNLR+C DCH+  K
Sbjct: 547 YKVETQHDLHQVGESIKQELLRHHSEKLAFTMGLLFLPPNAPIRIMKNLRICGDCHSFMK 606

Query: 753 FISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
             SK   R ++VRD NRFHHFK G CSCGD+W
Sbjct: 607 LASKFFCRDVIVRDTNRFHHFKNGCCSCGDFW 638



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 93/319 (29%), Positives = 158/319 (49%), Gaps = 7/319 (2%)

Query: 13  LSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDL 72
           L L    K   Q    HAQI++ G + DL T   L +  S   +  +AR +F  +P   L
Sbjct: 71  LKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSKCGSVDFARQVFDEMPSRSL 130

Query: 73  FLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTP-DNFTYSFVLSAASACCDRSIGVLLH 131
             +N +I   + N     ++     +++    TP   FT S VL A +A C  S   LLH
Sbjct: 131 VSWNTMIGSLTQNGEENEALDLLLQMQREG--TPFSEFTISSVLCACAAKCALSECQLLH 188

Query: 132 GHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQ 191
             AI +    ++FV  AL+D+Y K   +K A  VF+ MP++  V W+SM +G ++N  ++
Sbjct: 189 AFAIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMPDRSVVTWSSMAAGYVQNEMYE 248

Query: 192 DSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGL 251
            ++ +F      G    D   +++V+ A A +  +  G ++  L  K GF  +++V + L
Sbjct: 249 QALALFRKAWETGLKH-DQFLMSSVICACAGLAAMIEGKQMNALLSKSGFCSNIFVASSL 307

Query: 252 VSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNS 311
           +  Y+KCG +E +  +FRD+ + +++  NAMISG + + ++   + LF ++       N 
Sbjct: 308 IDMYAKCGGIEESYKVFRDVEKRNVVLWNAMISGLSRHARSLEVMILFEKMQQMGLSPND 367

Query: 312 STIVGLIPVFYPFGHLHLT 330
            T V    V    GH+ L 
Sbjct: 368 VTFVS---VLSACGHMGLV 383


>gi|147856413|emb|CAN82500.1| hypothetical protein VITISV_004914 [Vitis vinifera]
          Length = 1408

 Score =  414 bits (1064), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 221/737 (29%), Positives = 393/737 (53%), Gaps = 60/737 (8%)

Query: 107  DNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVF 166
            D+  YS  L   +   D  +G+ +HG  I  G+  D+++  AL++ Y +   ++ A +VF
Sbjct: 673  DSEVYSVALKTCTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALMNFYGRCWGLEKANQVF 732

Query: 167  DKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQEL 226
             +MP  + +LWN  I   +++   Q  + +F  M +      ++ ++  VL A  ++  L
Sbjct: 733  HEMPNPEALLWNEAIILNLQSEKLQKGVELFRKM-QFSFLKAETATIVRVLQACGKMGAL 791

Query: 227  RLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDI--------------- 271
                +I     + G    V +   L+S YSK G++E A  +F  +               
Sbjct: 792  NAAKQIHGYVFRFGLDSDVSLCNPLISMYSKNGKLELARRVFDSMENRNTSSWNSMISSY 851

Query: 272  --------------------VRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNS 311
                                ++PD+++ N ++SG+  +G  E  L + +++     + NS
Sbjct: 852  AALGFLNDAWSLFYELESSDMKPDIVTWNCLLSGHFLHGYKEEVLNILQRMQGEGFKPNS 911

Query: 312  STIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDE 371
            S++  ++      G L++    H + L++G   +  V T+L  +Y + + + +A+ +FD 
Sbjct: 912  SSMTSVLQAISELGFLNMGKETHGYVLRNGFDCDVYVGTSLIDMYVKNHSLXSAQAVFDN 971

Query: 372  SSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVT----------------- 414
               +++ +WN++++GY+  G+ E+A+ L  +M+   + P+ VT                 
Sbjct: 972  MKNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVTWNGMISGYAMWGCARKA 1031

Query: 415  -------VSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEAR 467
                   ++ +L ACA L  +  GK +H L     F  +++V+TALIDMY+K  ++  A 
Sbjct: 1032 FMPNSASITCLLRACASLSLLQKGKEIHCLSIRNGFIEDVFVATALIDMYSKSSSLKNAH 1091

Query: 468  ELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAG 527
            ++F  + +K+  +WN MI G+ + G G EA+ +F+EM   G+ P  +TF ++L AC ++G
Sbjct: 1092 KVFRRIQNKTLASWNCMIMGFAIFGLGKEAISVFNEMQKVGVGPDAITFTALLSACKNSG 1151

Query: 528  LVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGAL 587
            L+ EG + F SMI D+   P  EHY CMVD+LGRAG L++A + I  + ++P   +WGAL
Sbjct: 1152 LIGEGWKYFDSMITDYRIVPRLEHYCCMVDLLGRAGYLDEAWDLIHTMPLKPDATIWGAL 1211

Query: 588  LGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLA 647
            LG+C IHK+   A  A++ LF+L+P N   ++L+ N+YS    +     +R+++    + 
Sbjct: 1212 LGSCRIHKNLXFAETAAKNLFKLEPNNSANYILMMNLYSIFNRWEDMDHLRELMGAAGVR 1271

Query: 648  KAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEE 707
                 + I++    HVF+S ++ HP +  IY  L +L  +M++ G+  +      +++E 
Sbjct: 1272 NRQVWSWIQINQRVHVFSSDEKPHPDAGKIYFELYQLVSEMKKLGYVPDVNCVYQNMDEV 1331

Query: 708  EKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDA 767
            EK+ ++  H+EKLAI +GLI  + G  IR+IKN R+C DCH+A K+IS V  R + +RD 
Sbjct: 1332 EKQKILLSHTEKLAITYGLIKMKAGEPIRVIKNTRICSDCHSAAKYISLVKARELFLRDG 1391

Query: 768  NRFHHFKGGVCSCGDYW 784
             RFHHF+ G CSC D+W
Sbjct: 1392 VRFHHFREGKCSCNDFW 1408



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 116/420 (27%), Positives = 206/420 (49%), Gaps = 37/420 (8%)

Query: 149  LVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNC-CFQDSIWVFGDMVRNGGTW 207
            L+  Y  F    SA  VF     ++ + WNS +     +       + VF ++    G  
Sbjct: 613  LISSYLGFGDFWSAAMVFYVGLPRNYLKWNSFVEEFKSSAGSLHIVLEVFKEL-HGKGVV 671

Query: 208  LDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELL 267
             DS   +  L     V ++ LGMEI    +K GF   VY+   L++FY +C  +E+A  +
Sbjct: 672  FDSEVYSVALKTCTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALMNFYGRCWGLEKANQV 731

Query: 268  FRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHL 327
            F ++  P+ +  N  I     + K +  + LFR++  S  +  ++TIV ++      G L
Sbjct: 732  FHEMPNPEALLWNEAIILNLQSEKLQKGVELFRKMQFSFLKAETATIVRVLQACGKMGAL 791

Query: 328  HLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGY 387
            +    IH +  + G+ S+ S+   L ++YS+  ++E AR++FD    ++ +SWN+MI+ Y
Sbjct: 792  NAAKQIHGYVFRFGLDSDVSLCNPLISMYSKNGKLELARRVFDSMENRNTSSWNSMISSY 851

Query: 388  TQNGLTEEAISLFQEMQASKVAPNPVT--------------------------------- 414
               G   +A SLF E+++S + P+ VT                                 
Sbjct: 852  AALGFLNDAWSLFYELESSDMKPDIVTWNCLLSGHFLHGYKEEVLNILQRMQGEGFKPNS 911

Query: 415  --VSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDL 472
              ++S+L A ++LG +++GK  H  V    F+ ++YV T+LIDMY K  ++  A+ +FD 
Sbjct: 912  SSMTSVLQAISELGFLNMGKETHGYVLRNGFDCDVYVGTSLIDMYVKNHSLXSAQAVFDN 971

Query: 473  MSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREG 532
            M +++   WN+++SGY   G   +AL+L ++M   GI+P  VT+  ++   +  G  R+ 
Sbjct: 972  MKNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVTWNGMISGYAMWGCARKA 1031



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 73/270 (27%), Positives = 131/270 (48%), Gaps = 28/270 (10%)

Query: 60   ARALFFSIP----KPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVL 115
            A +LF+ +     KPD+  +N ++ G   +   +  +     + +     P++ + + VL
Sbjct: 860  AWSLFYELESSDMKPDIVTWNCLLSGHFLHGYKEEVLNILQRM-QGEGFKPNSSSMTSVL 918

Query: 116  SAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTV 175
             A S     ++G   HG+ + +G+  D++VG +L+D+Y K   + SA+ VFD M  ++  
Sbjct: 919  QAISELGFLNMGKETHGYVLRNGFDCDVYVGTSLIDMYVKNHSLXSAQAVFDNMKNRNIF 978

Query: 176  LWNSMISGLMKNCCFQDSIWVFGDMVRNG-----GTW------------------LDSTS 212
             WNS++SG      F+D++ +   M + G      TW                   +S S
Sbjct: 979  AWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVTWNGMISGYAMWGCARKAFMPNSAS 1038

Query: 213  VAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIV 272
            +  +L A A +  L+ G EI CL ++ GF + V+V T L+  YSK   ++ A  +FR I 
Sbjct: 1039 ITCLLRACASLSLLQKGKEIHCLSIRNGFIEDVFVATALIDMYSKSSSLKNAHKVFRRIQ 1098

Query: 273  RPDLISCNAMISGYTCNGKTESSLRLFRQL 302
               L S N MI G+   G  + ++ +F ++
Sbjct: 1099 NKTLASWNCMIMGFAIFGLGKEAISVFNEM 1128



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 58/217 (26%), Positives = 104/217 (47%), Gaps = 26/217 (11%)

Query: 27   QTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNE 86
            +TH  ++ +GF  D+   T L        +   A+A+F ++   ++F +N ++ G+S   
Sbjct: 932  ETHGYVLRNGFDCDVYVGTSLIDMYVKNHSLXSAQAVFDNMKNRNIFAWNSLVSGYSFKG 991

Query: 87   MPKSSICFYTHLRKNTALTPDNFTY---------------SFVLSAAS------ACCDRS 125
            M + ++     + K   + PD  T+               +F+ ++AS      AC   S
Sbjct: 992  MFEDALRLLNQMEKE-GIKPDLVTWNGMISGYAMWGCARKAFMPNSASITCLLRACASLS 1050

Query: 126  I---GVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMIS 182
            +   G  +H  +I +G+  D+FV  AL+D+Y K S +K+A KVF ++  K    WN MI 
Sbjct: 1051 LLQKGKEIHCLSIRNGFIEDVFVATALIDMYSKSSSLKNAHKVFRRIQNKTLASWNCMIM 1110

Query: 183  GLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPA 219
            G       +++I VF +M +  G   D+ +  A+L A
Sbjct: 1111 GFAIFGLGKEAISVFNEM-QKVGVGPDAITFTALLSA 1146


>gi|224077710|ref|XP_002305373.1| predicted protein [Populus trichocarpa]
 gi|222848337|gb|EEE85884.1| predicted protein [Populus trichocarpa]
          Length = 676

 Score =  414 bits (1064), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 242/667 (36%), Positives = 377/667 (56%), Gaps = 20/667 (2%)

Query: 1   MSMKTPQSRNLFLSLLKGAKTQSQLTQTHAQIIIHGFQN-DLSTVTKLAHRLSDFKATCY 59
           ++ KT Q ++L L     A++ +   Q HA +I  G  + D+ +V    +    +     
Sbjct: 17  LAPKTTQYQSL-LKHYGAAQSLTSTKQLHAHLITSGLLSIDIRSVLVATYAHCGYVHN-- 73

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           AR LF  + +    L+N +I+ +        ++  +  +  +    PDN+TY FV+ A S
Sbjct: 74  ARKLFDELRQRGTLLYNFMIKMYIAKGDYFEAMKVFLEMLGSKDCCPDNYTYPFVIKACS 133

Query: 120 ACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNS 179
                  G +LHG  +VS +GS LFV  +L+ +Y     V+ ARKVFD M EK  V WN+
Sbjct: 134 ELLLVEYGRVLHGLTLVSKFGSHLFVLNSLLAMYMNCGEVEEARKVFDAMKEKSVVSWNT 193

Query: 180 MISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLG------MEIQ 233
           MI+G  KN     ++ VF  MV + G  +D  SV +VLPA   ++EL +G      +E +
Sbjct: 194 MINGYFKNGFANTALVVFNQMV-DSGVEIDGASVVSVLPACGYLKELEVGRRVHGLVEEK 252

Query: 234 CLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTE 293
            LG K+       V   LV  Y+KCG ++ A L+F ++V  D++S  +MI+GY  NG  +
Sbjct: 253 VLGKKI-------VSNALVDMYAKCGSMDEARLVFDNMVERDVVSWTSMINGYILNGDAK 305

Query: 294 SSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALS 353
           S+L LF+ +     R NS TI  ++       +L    C+H + +K  + S  +V T+L 
Sbjct: 306 SALSLFKIMQIEGLRPNSVTIALILLACASLNNLKDGRCLHGWVMKQRLYSEVAVETSLI 365

Query: 354 TVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPV 413
            +Y++ N +  +  +F  +S K    WNA+++G   N L  EAI LF++M    V  N  
Sbjct: 366 DMYAKCNCLGLSFSVFTRTSRKKTVPWNALLSGCVHNKLATEAIGLFKKMLMEGVEINAA 425

Query: 414 TVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLM 473
           T +S+L A   L  +     ++  +    F SNI V+T+LID+Y+KCG++  A ++F+ +
Sbjct: 426 TCNSLLPAYGILADLQPVNNINSYLMRSGFVSNIQVATSLIDIYSKCGSLESAHKIFNTI 485

Query: 474 SHKSE--VTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVRE 531
               +    W+ +I+GYG+HGHG  A+ LF +M+ SG++P+ VTF SVL +CSHAG+V +
Sbjct: 486 PVDVQDIFVWSIIIAGYGMHGHGETAVSLFKQMVQSGVKPNDVTFTSVLQSCSHAGMVDD 545

Query: 532 GDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGAC 591
           G  +F+ M+ DH   P  +HY CMVD+LGRAG++++A + IK +   PG AVWGALLGAC
Sbjct: 546 GLYLFKFMLKDHQTIPNDDHYTCMVDLLGRAGRMDEAYDLIKTMPFMPGHAVWGALLGAC 605

Query: 592 MIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPG 651
           ++H++  L  VA+  LFEL+P N G +VLL+ +Y+A   +  A  VRQ +    L KAP 
Sbjct: 606 VMHENVELGEVAARWLFELEPGNTGNYVLLAKLYAALGRWEDAENVRQRMDDIGLRKAPA 665

Query: 652 CTLIEVG 658
            +LIE G
Sbjct: 666 HSLIEAG 672


>gi|225448607|ref|XP_002274158.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Vitis vinifera]
          Length = 820

 Score =  414 bits (1064), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 227/663 (34%), Positives = 365/663 (55%), Gaps = 16/663 (2%)

Query: 50  RLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNF 109
           + S+F+A C    +F  +P+ ++F + V+I G + + +      F+  +  N+ + PD F
Sbjct: 167 KCSEFRAAC---GVFDEMPQRNVFSWTVMIVGSTEHGLFFDGFKFFCEML-NSGILPDKF 222

Query: 110 TYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKM 169
            YS ++ +        +G ++H   ++ G+ + +FV  +L+++Y K   ++ +  VF+ M
Sbjct: 223 AYSAIIQSCIGLDSLELGKMVHAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMM 282

Query: 170 PEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLG 229
            E + V WN+MISG   N    ++  +F  M +NG    +  ++ +V  AV ++ ++ +G
Sbjct: 283 TEHNQVSWNAMISGCTSNGLHLEAFDLFVRM-KNGACTPNMYTLVSVSKAVGKLVDVNMG 341

Query: 230 MEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISC------NAMI 283
            E+Q    +LG   +V V T L+  YSKCG +  A    R +   + I+C      NAMI
Sbjct: 342 KEVQNCASELGIEGNVLVGTALIDMYSKCGSLHDA----RSVFDTNFINCGVNTPWNAMI 397

Query: 284 SGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGI- 342
           SGY+ +G ++ +L L+ Q+  +    +  T   +         L     +H   LK G+ 
Sbjct: 398 SGYSQSGCSQEALELYVQMCQNGITSDLYTYCSVFNAIAASKSLQFGRVVHGMVLKCGLD 457

Query: 343 VSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQE 402
           +   SV  A++  YS+   +E  RK+FD   E+ + SW  ++  Y+Q+ L EEA++ F  
Sbjct: 458 LMVVSVNNAIADAYSKCGFLEDVRKVFDRMEERDIVSWTTLVTAYSQSSLGEEALATFCL 517

Query: 403 MQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGN 462
           M+    APN  T SS+L +CA L  +  G+ VH L+     ++   + +ALIDMYAKCG+
Sbjct: 518 MREEGFAPNQFTFSSVLISCASLCFLEYGRQVHGLLCKAGLDTEKCIESALIDMYAKCGS 577

Query: 463 IVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYA 522
           I EA ++FD +S+   V+W  +ISGY  HG   +ALQLF  M  SGI+ + VT L VL+A
Sbjct: 578 ITEAGKVFDKISNPDIVSWTAIISGYAQHGLVEDALQLFRRMELSGIKANAVTLLCVLFA 637

Query: 523 CSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPA 582
           CSH G+V EG   FQ M   +G  P  EHYAC++D+LGR G+L+ A+EFI+ + +EP   
Sbjct: 638 CSHGGMVEEGLFYFQQMEDGYGVVPEMEHYACIIDLLGRVGRLDDAMEFIRKMPMEPNEM 697

Query: 583 VWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVK 642
           VW  LLG C +H +  L  +A+ K+  + PE    +VLLSN Y     Y    ++R V+K
Sbjct: 698 VWQTLLGGCRVHGNVELGEIAARKILSIRPEYSATYVLLSNTYIETGSYEDGLSLRNVMK 757

Query: 643 KRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALH 702
            + + K PG + I V G  H F SGDQ HPQ   IY  LE+L  K++  G+  +    L+
Sbjct: 758 DQGVKKEPGYSWISVKGRVHKFYSGDQQHPQKKEIYVKLEELREKIKAMGYVPDLRYVLN 817

Query: 703 DVE 705
           + +
Sbjct: 818 NAD 820



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 123/446 (27%), Positives = 221/446 (49%), Gaps = 6/446 (1%)

Query: 152 LYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDST 211
           +Y K S  ++A  VFD+MP+++   W  MI G  ++  F D    F +M+ N G   D  
Sbjct: 164 VYSKCSEFRAACGVFDEMPQRNVFSWTVMIVGSTEHGLFFDGFKFFCEML-NSGILPDKF 222

Query: 212 SVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDI 271
           + +A++ +   +  L LG  +    +  GF  H++V T L++ Y+K G +E +  +F  +
Sbjct: 223 AYSAIIQSCIGLDSLELGKMVHAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMM 282

Query: 272 VRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTN 331
              + +S NAMISG T NG    +  LF ++   A   N  T+V +         +++  
Sbjct: 283 TEHNQVSWNAMISGCTSNGLHLEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGK 342

Query: 332 CIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLAS--WNAMIAGYTQ 389
            + +   + GI  N  V TAL  +YS+   +  AR +FD +      +  WNAMI+GY+Q
Sbjct: 343 EVQNCASELGIEGNVLVGTALIDMYSKCGSLHDARSVFDTNFINCGVNTPWNAMISGYSQ 402

Query: 390 NGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIY- 448
           +G ++EA+ L+ +M  + +  +  T  S+ +A A   ++  G+ VH +V     +  +  
Sbjct: 403 SGCSQEALELYVQMCQNGITSDLYTYCSVFNAIAASKSLQFGRVVHGMVLKCGLDLMVVS 462

Query: 449 VSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSG 508
           V+ A+ D Y+KCG + + R++FD M  +  V+W T+++ Y     G EAL  F  M   G
Sbjct: 463 VNNAIADAYSKCGFLEDVRKVFDRMEERDIVSWTTLVTAYSQSSLGEEALATFCLMREEG 522

Query: 509 IRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKA 568
             P+  TF SVL +C+    +  G ++   ++   G        + ++D+  + G + +A
Sbjct: 523 FAPNQFTFSSVLISCASLCFLEYGRQV-HGLLCKAGLDTEKCIESALIDMYAKCGSITEA 581

Query: 569 LEFIKGLAVEPGPAVWGALLGACMIH 594
            +    ++  P    W A++     H
Sbjct: 582 GKVFDKIS-NPDIVSWTAIISGYAQH 606



 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 122/471 (25%), Positives = 224/471 (47%), Gaps = 7/471 (1%)

Query: 28  THAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNEM 87
            HAQI++ GF   +   T L +  +   +   +  +F  + + +   +N +I G ++N +
Sbjct: 243 VHAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTEHNQVSWNAMISGCTSNGL 302

Query: 88  PKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGA 147
              +   +  + KN A TP+ +T   V  A     D ++G  +   A   G   ++ VG 
Sbjct: 303 HLEAFDLFVRM-KNGACTPNMYTLVSVSKAVGKLVDVNMGKEVQNCASELGIEGNVLVGT 361

Query: 148 ALVDLYFKFSWVKSARKVFDK--MPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGG 205
           AL+D+Y K   +  AR VFD   +       WN+MISG  ++ C Q+++ ++  M +NG 
Sbjct: 362 ALIDMYSKCGSLHDARSVFDTNFINCGVNTPWNAMISGYSQSGCSQEALELYVQMCQNGI 421

Query: 206 TWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVY-VLTGLVSFYSKCGEVERA 264
           T  D  +  +V  A+A  + L+ G  +  + LK G    V  V   +   YSKCG +E  
Sbjct: 422 T-SDLYTYCSVFNAIAASKSLQFGRVVHGMVLKCGLDLMVVSVNNAIADAYSKCGFLEDV 480

Query: 265 ELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPF 324
             +F  +   D++S   +++ Y+ +   E +L  F  +       N  T   ++      
Sbjct: 481 RKVFDRMEERDIVSWTTLVTAYSQSSLGEEALATFCLMREEGFAPNQFTFSSVLISCASL 540

Query: 325 GHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMI 384
             L     +H    K+G+ +   + +AL  +Y++   +  A K+FD+ S   + SW A+I
Sbjct: 541 CFLEYGRQVHGLLCKAGLDTEKCIESALIDMYAKCGSITEAGKVFDKISNPDIVSWTAII 600

Query: 385 AGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGK-WVHELVKSRNF 443
           +GY Q+GL E+A+ LF+ M+ S +  N VT+  +L AC+  G +  G  +  ++      
Sbjct: 601 SGYAQHGLVEDALQLFRRMELSGIKANAVTLLCVLFACSHGGMVEEGLFYFQQMEDGYGV 660

Query: 444 ESNIYVSTALIDMYAKCGNIVEARELFDLMSHK-SEVTWNTMISGYGLHGH 493
              +     +ID+  + G + +A E    M  + +E+ W T++ G  +HG+
Sbjct: 661 VPEMEHYACIIDLLGRVGRLDDAMEFIRKMPMEPNEMVWQTLLGGCRVHGN 711



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 152/311 (48%), Gaps = 4/311 (1%)

Query: 216 VLPAVAEVQELRLGMEIQCLGLKLGFHDH--VYVLTGLVSFYSKCGEVERAELLFRDIVR 273
           VL   AE   +R    +  L LK  F D   + +       YSKC E   A  +F ++ +
Sbjct: 124 VLRDCAEKGSIREAKAVHGLVLKSNFEDKDLMVLFNHAAHVYSKCSEFRAACGVFDEMPQ 183

Query: 274 PDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCI 333
            ++ S   MI G T +G      + F ++L S    +      +I        L L   +
Sbjct: 184 RNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAYSAIIQSCIGLDSLELGKMV 243

Query: 334 HSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLT 393
           H+  +  G  ++  V T+L  +Y++L  +E +  +F+  +E +  SWNAMI+G T NGL 
Sbjct: 244 HAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTEHNQVSWNAMISGCTSNGLH 303

Query: 394 EEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTAL 453
            EA  LF  M+     PN  T+ S+  A  +L  +++GK V         E N+ V TAL
Sbjct: 304 LEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKEVQNCASELGIEGNVLVGTAL 363

Query: 454 IDMYAKCGNIVEARELFD--LMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRP 511
           IDMY+KCG++ +AR +FD   ++      WN MISGY   G   EAL+L+ +M  +GI  
Sbjct: 364 IDMYSKCGSLHDARSVFDTNFINCGVNTPWNAMISGYSQSGCSQEALELYVQMCQNGITS 423

Query: 512 SGVTFLSVLYA 522
              T+ SV  A
Sbjct: 424 DLYTYCSVFNA 434



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 79/246 (32%), Positives = 129/246 (52%), Gaps = 3/246 (1%)

Query: 325 GHLHLTNCIHSFCLKSGIVSNS--SVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNA 382
           G +     +H   LKS         +    + VYS+ +E  AA  +FDE  ++++ SW  
Sbjct: 132 GSIREAKAVHGLVLKSNFEDKDLMVLFNHAAHVYSKCSEFRAACGVFDEMPQRNVFSWTV 191

Query: 383 MIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRN 442
           MI G T++GL  +    F EM  S + P+    S+I+ +C  L ++ LGK VH  +  R 
Sbjct: 192 MIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAYSAIIQSCIGLDSLELGKMVHAQIVMRG 251

Query: 443 FESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFS 502
           F ++I+VST+L++MYAK G+I ++  +F++M+  ++V+WN MISG   +G  LEA  LF 
Sbjct: 252 FATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTEHNQVSWNAMISGCTSNGLHLEAFDLFV 311

Query: 503 EMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRA 562
            M +    P+  T +SV  A      V  G E+ Q+   + G +        ++D+  + 
Sbjct: 312 RMKNGACTPNMYTLVSVSKAVGKLVDVNMGKEV-QNCASELGIEGNVLVGTALIDMYSKC 370

Query: 563 GQLEKA 568
           G L  A
Sbjct: 371 GSLHDA 376


>gi|449494221|ref|XP_004159483.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g04780-like [Cucumis sativus]
          Length = 638

 Score =  414 bits (1064), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 215/572 (37%), Positives = 335/572 (58%)

Query: 213 VAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIV 272
           V  +L   A+ + L  G       L +G    +     L++ YSKCG V+ A  +F ++ 
Sbjct: 67  VHEILKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSKCGSVDFARQVFDEMP 126

Query: 273 RPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNC 332
              L+S N MI   T NG+   +L L  Q+       +  TI  ++        L     
Sbjct: 127 SRSLVSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCALSECQL 186

Query: 333 IHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGL 392
           +H+F +K+ +  N  V TAL  VY++   M+ A  +F+   ++S+ +W++M AGY QN +
Sbjct: 187 LHAFAIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMPDRSVVTWSSMAAGYVQNEM 246

Query: 393 TEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTA 452
            E+A++LF++   + +  +   +SS++ ACA L A+  GK V+ L+    F SNI+V+++
Sbjct: 247 YEQALALFRKAWETGLKHDQFLMSSVICACAGLAAMIEGKQVNALLSKSGFCSNIFVASS 306

Query: 453 LIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPS 512
           LIDMYAKCG I E+ ++F  +  ++ V WN MISG   H   LE + LF +M   G+ P+
Sbjct: 307 LIDMYAKCGGIEESYKVFRDVEKRNVVLWNAMISGLSRHARSLEVMILFEKMQQMGLSPN 366

Query: 513 GVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFI 572
            VTF+SVL AC H GLV++G + F  M  +H   P   HY+CMVD L RAGQ+ +A + I
Sbjct: 367 DVTFVSVLSACGHMGLVKKGQKYFDLMTKEHHLAPNVFHYSCMVDTLSRAGQIFEAYDLI 426

Query: 573 KGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYL 632
             L      ++WG+LL +C  H +  LA VA++KLF+++P N G ++LLSN+Y+A   + 
Sbjct: 427 SKLPFNASASMWGSLLASCRTHGNLELAEVAAKKLFDIEPHNSGNYLLLSNMYAANGKWD 486

Query: 633 QAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAG 692
           + A +R+++K+  + K  G + IE+    H+F  G++ HP+   IY+ L ++  ++++ G
Sbjct: 487 EVAKMRKLLKESDVKKERGKSWIEIKDKVHLFMVGERNHPKIVEIYSKLNEVMDELQKLG 546

Query: 693 FQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATK 752
           ++ ET   LH V E  K+ +++ HSEKLA   GL+   P   IRI+KNLR+C DCH+  K
Sbjct: 547 YKVETQHDLHQVGESIKQELLRHHSEKLAFTMGLLFLPPNAPIRIMKNLRICGDCHSFMK 606

Query: 753 FISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
             SK   R ++VRD NRFHHFK G CSCGD+W
Sbjct: 607 LASKFFCRDVIVRDTNRFHHFKNGCCSCGDFW 638



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 93/319 (29%), Positives = 158/319 (49%), Gaps = 7/319 (2%)

Query: 13  LSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDL 72
           L L    K   Q    HAQI++ G + DL T   L +  S   +  +AR +F  +P   L
Sbjct: 71  LKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSKCGSVDFARQVFDEMPSRSL 130

Query: 73  FLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTP-DNFTYSFVLSAASACCDRSIGVLLH 131
             +N +I   + N     ++     +++    TP   FT S VL A +A C  S   LLH
Sbjct: 131 VSWNTMIGSLTQNGEENEALDLLLQMQREG--TPFSEFTISSVLCACAAKCALSECQLLH 188

Query: 132 GHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQ 191
             AI +    ++FV  AL+D+Y K   +K A  VF+ MP++  V W+SM +G ++N  ++
Sbjct: 189 AFAIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMPDRSVVTWSSMAAGYVQNEMYE 248

Query: 192 DSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGL 251
            ++ +F      G    D   +++V+ A A +  +  G ++  L  K GF  +++V + L
Sbjct: 249 QALALFRKAWETGLKH-DQFLMSSVICACAGLAAMIEGKQVNALLSKSGFCSNIFVASSL 307

Query: 252 VSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNS 311
           +  Y+KCG +E +  +FRD+ + +++  NAMISG + + ++   + LF ++       N 
Sbjct: 308 IDMYAKCGGIEESYKVFRDVEKRNVVLWNAMISGLSRHARSLEVMILFEKMQQMGLSPND 367

Query: 312 STIVGLIPVFYPFGHLHLT 330
            T V    V    GH+ L 
Sbjct: 368 VTFVS---VLSACGHMGLV 383


>gi|413954823|gb|AFW87472.1| hypothetical protein ZEAMMB73_326917 [Zea mays]
          Length = 610

 Score =  414 bits (1064), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 210/573 (36%), Positives = 340/573 (59%), Gaps = 4/573 (0%)

Query: 214 AAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVR 273
           AA+   V   + LR G ++    +  G+   +Y+ T LV  Y++CG +E A  +   +  
Sbjct: 40  AAITECVGR-RALREGRQVHARMVTAGYRPALYLATRLVIMYARCGALEDAHNVLDGMPE 98

Query: 274 PDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFG--HLHLTN 331
            +++S  AMISGY+ N +   +  LF  +L +    N  T+  ++         H H   
Sbjct: 99  RNVVSWTAMISGYSQNERPAEAWDLFIMMLRAGCEPNEFTLASVLTSCTGSQGIHQHQIK 158

Query: 332 CIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNG 391
            +H+F +K     +  V ++L  +Y+R   ++ AR++FD    + + S+  +++GYT+ G
Sbjct: 159 QVHAFAIKKNFELHMFVGSSLLDMYARSENIQEARRVFDMLPARDVVSYTTILSGYTRLG 218

Query: 392 LTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVST 451
           L EEA++LF+++    +  N VT S +L+A + L ++  GK VH L+  R     + +  
Sbjct: 219 LDEEALNLFRQLYNEGMQCNQVTFSVLLNALSGLSSMDYGKQVHGLILRRELPFFMALQN 278

Query: 452 ALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRP 511
           +LIDMY+KCG ++ +R +FD M  +S V+WN M+ GYG HG   E +QLF  M    ++P
Sbjct: 279 SLIDMYSKCGKLLYSRRVFDNMPERSVVSWNAMLMGYGRHGMAYEVVQLFRFMCDK-VKP 337

Query: 512 SGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEF 571
             VT L+VL   SH GLV EG ++F  ++ +       +HY C++D+LGR+GQLEKAL  
Sbjct: 338 DSVTLLAVLLGYSHGGLVDEGLDMFDHIVKEQSTLLNTQHYGCVIDLLGRSGQLEKALLL 397

Query: 572 IKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDY 631
           I+ +  +P  A+WG+LLGAC +H + ++    ++KLF+++PEN G +V+LSNIY+A R +
Sbjct: 398 IQKMPFQPTRAIWGSLLGACRVHANVHVGEFVAQKLFDIEPENAGNYVILSNIYAAARMW 457

Query: 632 LQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREA 691
                +R+++ K+ + K PG + + +    H F S ++ HP+   I   + ++   ++ A
Sbjct: 458 KDVFRLRKLMLKKTVIKEPGRSWMILDKVIHTFHSSERFHPRKEDINVKINEIYAAIKAA 517

Query: 692 GFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTAT 751
           GF  +    LHDV++E+KE M+  HSEKLAI FGL++T     I+++KNLR+C+DCH   
Sbjct: 518 GFVPDLSCVLHDVDDEQKERMLLGHSEKLAITFGLMSTPSDLTIQVMKNLRICVDCHNFA 577

Query: 752 KFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           KF+SKV GR I +RD NRFH    G C+CGDYW
Sbjct: 578 KFVSKVYGREISLRDKNRFHLITEGACTCGDYW 610



 Score =  105 bits (263), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 94/423 (22%), Positives = 193/423 (45%), Gaps = 46/423 (10%)

Query: 18  GAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNV 77
           G +   +  Q HA+++  G++  L   T+L    +   A   A  +   +P+ ++  +  
Sbjct: 47  GRRALREGRQVHARMVTAGYRPALYLATRLVIMYARCGALEDAHNVLDGMPERNVVSWTA 106

Query: 78  IIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGV------LLH 131
           +I G+S NE P  +   +  + +     P+ FT + VL++    C  S G+       +H
Sbjct: 107 MISGYSQNERPAEAWDLFIMMLR-AGCEPNEFTLASVLTS----CTGSQGIHQHQIKQVH 161

Query: 132 GHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQ 191
             AI   +   +FVG++L+D+Y +   ++ AR+VFD +P +D V + +++SG  +    +
Sbjct: 162 AFAIKKNFELHMFVGSSLLDMYARSENIQEARRVFDMLPARDVVSYTTILSGYTRLGLDE 221

Query: 192 DSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGL 251
           +++ +F  +  N G   +  + + +L A++ +  +  G ++  L L+      + +   L
Sbjct: 222 EALNLFRQLY-NEGMQCNQVTFSVLLNALSGLSSMDYGKQVHGLILRRELPFFMALQNSL 280

Query: 252 VSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNS 311
           +  YSKCG++  +  +F ++    ++S NAM+ GY  +G     ++LFR +    ++V  
Sbjct: 281 IDMYSKCGKLLYSRRVFDNMPERSVVSWNAMLMGYGRHGMAYEVVQLFRFM---CDKVKP 337

Query: 312 STIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDE 371
            ++  L+ V   + H  L +      +   IV   S L  L+T +               
Sbjct: 338 DSVT-LLAVLLGYSHGGLVD--EGLDMFDHIVKEQSTL--LNTQH--------------- 377

Query: 372 SSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLG 431
                   +  +I    ++G  E+A+ L Q+M      P      S+L AC     + +G
Sbjct: 378 --------YGCVIDLLGRSGQLEKALLLIQKM---PFQPTRAIWGSLLGACRVHANVHVG 426

Query: 432 KWV 434
           ++V
Sbjct: 427 EFV 429


>gi|356536721|ref|XP_003536884.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g62890-like [Glycine max]
          Length = 1116

 Score =  414 bits (1063), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 194/423 (45%), Positives = 279/423 (65%), Gaps = 4/423 (0%)

Query: 365 ARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLF---QEMQASKVAPNPVTVSSILSA 421
           ARKLFD+  EK++ SW+ MI GY   G  + A+SLF   Q ++ S++ PN  T+SS+LSA
Sbjct: 145 ARKLFDQMPEKNVISWSCMIHGYVSCGEYKAALSLFRSLQTLEGSQLRPNEFTMSSVLSA 204

Query: 422 CAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFD-LMSHKSEVT 480
           CA+LGA+  GKWVH  +     + ++ + T+LIDMYAKCG+I  A+ +FD L   K  + 
Sbjct: 205 CARLGALQHGKWVHAYIDKTGMKIDVVLGTSLIDMYAKCGSIERAKCIFDNLGPEKDVMA 264

Query: 481 WNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMI 540
           W+ MI+ + +HG   E L+LF+ M++ G+RP+ VTF++VL AC H GLV EG+E F+ M+
Sbjct: 265 WSAMITAFSMHGLSEECLELFARMVNDGVRPNAVTFVAVLCACVHGGLVSEGNEYFKRMM 324

Query: 541 HDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLA 600
           +++G  P+ +HY CMVD+  RAG++E A   +K + +EP   +WGALL    IH D    
Sbjct: 325 NEYGVSPMIQHYGCMVDLYSRAGRIEDAWNVVKSMPMEPDVMIWGALLNGARIHGDVETC 384

Query: 601 RVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGT 660
            +A  KL ELDP N   +VLLSN+Y+    + +   +R +++ R + K PGC+L+EV G 
Sbjct: 385 EIAITKLLELDPANSSAYVLLSNVYAKLGRWREVRHLRDLMEVRGIKKLPGCSLVEVDGV 444

Query: 661 PHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKL 720
              F +GD  HP+   +Y ML+++  ++ + G++  T   L D++EE KE  + +HSEKL
Sbjct: 445 IREFFAGDNSHPELLNLYVMLDEIMKRLEKHGYERNTGEVLLDLDEEGKEFALSLHSEKL 504

Query: 721 AIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSC 780
           AIA+  + T PGT IRI+KNLR+C DCH A K ISK   R I+VRD NRFHHFK G+CSC
Sbjct: 505 AIAYCFLRTSPGTTIRIVKNLRICSDCHVAIKIISKEFNREIIVRDCNRFHHFKNGLCSC 564

Query: 781 GDY 783
            DY
Sbjct: 565 KDY 567



 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 93/371 (25%), Positives = 164/371 (44%), Gaps = 59/371 (15%)

Query: 170 PEKDTVLWNSMISG----LMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLP------- 218
           P  ++ +WN++I       ++N  F  ++ ++  M            + AVLP       
Sbjct: 20  PNIESFVWNNLIRASTRSRVQNPAFPPALSLYLRM-----------RLHAVLPDLHTFPF 68

Query: 219 AVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLIS 278
            +  +     G ++    L LG  +  +V T L++ YS CG    A   F +I +PDL S
Sbjct: 69  LLQSINTPHRGRQLHAQILLLGLANDPFVQTSLINMYSSCGTPTFARQAFDEITQPDLPS 128

Query: 279 CNA-------------------------------MISGYTCNGKTESSLRLFRQLL---A 304
            NA                               MI GY   G+ +++L LFR L     
Sbjct: 129 WNAIIHANAKAGMIHIARKLFDQMPEKNVISWSCMIHGYVSCGEYKAALSLFRSLQTLEG 188

Query: 305 SAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEA 364
           S  R N  T+  ++      G L     +H++  K+G+  +  + T+L  +Y++   +E 
Sbjct: 189 SQLRPNEFTMSSVLSACARLGALQHGKWVHAYIDKTGMKIDVVLGTSLIDMYAKCGSIER 248

Query: 365 ARKLFDE-SSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACA 423
           A+ +FD    EK + +W+AMI  ++ +GL+EE + LF  M    V PN VT  ++L AC 
Sbjct: 249 AKCIFDNLGPEKDVMAWSAMITAFSMHGLSEECLELFARMVNDGVRPNAVTFVAVLCACV 308

Query: 424 QLGAISLG-KWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEV-TW 481
             G +S G ++   ++        I     ++D+Y++ G I +A  +   M  + +V  W
Sbjct: 309 HGGLVSEGNEYFKRMMNEYGVSPMIQHYGCMVDLYSRAGRIEDAWNVVKSMPMEPDVMIW 368

Query: 482 NTMISGYGLHG 492
             +++G  +HG
Sbjct: 369 GALLNGARIHG 379



 Score = 99.4 bits (246), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 107/464 (23%), Positives = 203/464 (43%), Gaps = 80/464 (17%)

Query: 50  RLSDFKATCYARALFFSIPKPDLFLFNVIIRGFS----NNEMPKSSICFYTHLRKNTALT 105
           R S    +C   +L  S P  + F++N +IR  +     N     ++  Y  +R +  L 
Sbjct: 2   RASAKAISCTHPSLHLSHPNIESFVWNNLIRASTRSRVQNPAFPPALSLYLRMRLHAVL- 60

Query: 106 PDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKV 165
           PD  T+ F+L + +       G  LH   ++ G  +D FV  +L+++Y        AR+ 
Sbjct: 61  PDLHTFPFLLQSINT---PHRGRQLHAQILLLGLANDPFVQTSLINMYSSCGTPTFARQA 117

Query: 166 FDK-------------------------------MPEKDTVLWNSMISGLMKNCCFQDSI 194
           FD+                               MPEK+ + W+ MI G +    ++ ++
Sbjct: 118 FDEITQPDLPSWNAIIHANAKAGMIHIARKLFDQMPEKNVISWSCMIHGYVSCGEYKAAL 177

Query: 195 WVFGDMVRNGGTWL--DSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLV 252
            +F  +    G+ L  +  ++++VL A A +  L+ G  +     K G    V + T L+
Sbjct: 178 SLFRSLQTLEGSQLRPNEFTMSSVLSACARLGALQHGKWVHAYIDKTGMKIDVVLGTSLI 237

Query: 253 SFYSKCGEVERAELLFRDI-VRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNS 311
             Y+KCG +ERA+ +F ++    D+++ +AMI+ ++ +G +E  L LF +++    R N+
Sbjct: 238 DMYAKCGSIERAKCIFDNLGPEKDVMAWSAMITAFSMHGLSEECLELFARMVNDGVRPNA 297

Query: 312 STIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDE 371
            T V +           L  C+H      G+VS  +               E  +++ +E
Sbjct: 298 VTFVAV-----------LCACVH-----GGLVSEGN---------------EYFKRMMNE 326

Query: 372 SSEKSLAS-WNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISL 430
                +   +  M+  Y++ G  E+A ++ + M    + P+ +   ++L+     G +  
Sbjct: 327 YGVSPMIQHYGCMVDLYSRAGRIEDAWNVVKSM---PMEPDVMIWGALLNGARIHGDVET 383

Query: 431 GKW-VHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLM 473
            +  + +L++     S+ YV   L ++YAK G   E R L DLM
Sbjct: 384 CEIAITKLLELDPANSSAYV--LLSNVYAKLGRWREVRHLRDLM 425



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 96/355 (27%), Positives = 162/355 (45%), Gaps = 48/355 (13%)

Query: 12  FLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPD 71
           F  LL+   T  +  Q HAQI++ G  ND    T L +  S      +AR  F  I +PD
Sbjct: 66  FPFLLQSINTPHRGRQLHAQILLLGLANDPFVQTSLINMYSSCGTPTFARQAFDEITQPD 125

Query: 72  LFLFNVIIRGFSN-----------NEMP--------------------KSSICFYTHLR- 99
           L  +N II   +            ++MP                    K+++  +  L+ 
Sbjct: 126 LPSWNAIIHANAKAGMIHIARKLFDQMPEKNVISWSCMIHGYVSCGEYKAALSLFRSLQT 185

Query: 100 -KNTALTPDNFTYSFVLSAASACCDRSIGVLLHG---HAIV--SGYGSDLFVGAALVDLY 153
            + + L P+ FT S VLSA    C R +G L HG   HA +  +G   D+ +G +L+D+Y
Sbjct: 186 LEGSQLRPNEFTMSSVLSA----CAR-LGALQHGKWVHAYIDKTGMKIDVVLGTSLIDMY 240

Query: 154 FKFSWVKSARKVFDKM-PEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTS 212
            K   ++ A+ +FD + PEKD + W++MI+    +   ++ + +F  MV N G   ++ +
Sbjct: 241 AKCGSIERAKCIFDNLGPEKDVMAWSAMITAFSMHGLSEECLELFARMV-NDGVRPNAVT 299

Query: 213 VAAVLPAVAEVQELRLGME-IQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDI 271
             AVL A      +  G E  + +  + G    +     +V  YS+ G +E A  + + +
Sbjct: 300 FVAVLCACVHGGLVSEGNEYFKRMMNEYGVSPMIQHYGCMVDLYSRAGRIEDAWNVVKSM 359

Query: 272 -VRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFG 325
            + PD++   A+++G   +G  E+      +LL   +  NSS  V L  V+   G
Sbjct: 360 PMEPDVMIWGALLNGARIHGDVETCEIAITKLL-ELDPANSSAYVLLSNVYAKLG 413


>gi|414879943|tpg|DAA57074.1| TPA: hypothetical protein ZEAMMB73_804341 [Zea mays]
          Length = 1056

 Score =  414 bits (1063), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 241/631 (38%), Positives = 363/631 (57%), Gaps = 33/631 (5%)

Query: 177  WNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPA-VAEVQELRLGM---EI 232
            W++ +  L +    ++SI     ++R+GG      ++A  LPA V     L L     +I
Sbjct: 436  WSARVRTLTRLGRHKESIA----LLRHGGPSPPPHALA--LPASVISCAALSLPTGVAQI 489

Query: 233  QCLGLKLGF--HDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDL------ISCNAMIS 284
              L  K G       Y+L+ L++ YS+ G +  A  L  +             + N++IS
Sbjct: 490  HALAAKRGLLPAADAYLLSALLTAYSRLGCLRLAHQLLDETPIESTSHTTLRTAFNSLIS 549

Query: 285  GYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVS 344
            G   +    +   LFR++ A A R ++ T++ L+P       L +   +H+   + G+ +
Sbjct: 550  GCARHSLPVACFALFRRMRAIAVRFDAVTLLALVPA----APLSVVPQVHALAAQVGLAT 605

Query: 345  NSSVLTALSTVYSRLNEMEAA--RKLFDES--SEKSLASWNAMIAGYTQNGLTEEAISLF 400
             +SV   L + Y+R     AA  R++FDE   + + L SWNA+++ + QNGL  +A+ L+
Sbjct: 606  ETSVANCLMSTYARGGAFGAALARRVFDEMPLASRDLVSWNAVLSAHAQNGLAVDALDLY 665

Query: 401  QEMQA---SKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSR--NFESNIYVSTALID 455
            + M++   S V P+ VT+  +LS+ A LGA  +G      V  R   F +N+ +  ALI+
Sbjct: 666  RRMRSPEGSGVEPDAVTIVGVLSSAAHLGARGVGFDAEHYVVQRLPGFRTNVQLCNALIN 725

Query: 456  MYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVT 515
             +A+CG++  A++LFD M  KS V+W  +I+G+G+HG+G  A+ LF  M+  GI P  V 
Sbjct: 726  FHARCGSLPRAQQLFDEMPAKSIVSWTALITGHGMHGNGGVAVSLFERMVSEGIHPDNVA 785

Query: 516  FLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGL 575
             + VL ACSHAGL  EG   F +M   +  +P  EHY C+VD+LGRAG+LE+A E I  +
Sbjct: 786  MVGVLSACSHAGLYDEGRMYFSTMESVYKLRPTLEHYTCIVDLLGRAGRLEEARELISSM 845

Query: 576  AVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAA 635
             +    AVWGALLGAC IHK+  +   A  ++ EL+P NVGY+VL+SNIY+        A
Sbjct: 846  PMPADGAVWGALLGACKIHKNVEIGEEAFARVVELEPRNVGYYVLMSNIYTDTGQLDCVA 905

Query: 636  TVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQT 695
             VR V++KR L K PGC+ +E  G  H+F + D  HPQ+  IY ++ +L   ++E     
Sbjct: 906  RVRAVMRKRGLKKEPGCSYVEHNGRVHLFMADDHSHPQARRIYELVTRLELMVKEKSGVR 965

Query: 696  ETVTALHD--VEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKF 753
            E+V A+    +E+E  + ++  HSEKLA+AFGL+ TE G+EI +IKNLRVC DCH+  K 
Sbjct: 966  ESVVAVPKGRMEKEAAQPLVGFHSEKLAVAFGLLNTEAGSEIVVIKNLRVCGDCHSFLKA 1025

Query: 754  ISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
            +S  T R  +VRDA+RFH F GGVCSC DYW
Sbjct: 1026 VSATTNRSFLVRDASRFHRFDGGVCSCKDYW 1056



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 93/414 (22%), Positives = 181/414 (43%), Gaps = 60/414 (14%)

Query: 75  FNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHA 134
           FN +I G + + +P +    +  +R   A+  D  T   ++ AA      S+   +H  A
Sbjct: 544 FNSLISGCARHSLPVACFALFRRMRA-IAVRFDAVTLLALVPAAPL----SVVPQVHALA 598

Query: 135 IVSGYGSDLFVGAALVDLYFKFSWVKSA--RKVFDKMP--EKDTVLWNSMISGLMKNCCF 190
              G  ++  V   L+  Y +     +A  R+VFD+MP   +D V WN+++S   +N   
Sbjct: 599 AQVGLATETSVANCLMSTYARGGAFGAALARRVFDEMPLASRDLVSWNAVLSAHAQNGLA 658

Query: 191 QDSIWVFGDMVRNGGTWL--DSTSVAAVLPAVAEVQELRLGMEIQCLGLKL--GFHDHVY 246
            D++ ++  M    G+ +  D+ ++  VL + A +    +G + +   ++   GF  +V 
Sbjct: 659 VDALDLYRRMRSPEGSGVEPDAVTIVGVLSSAAHLGARGVGFDAEHYVVQRLPGFRTNVQ 718

Query: 247 VLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASA 306
           +   L++F+++CG + RA+ LF ++    ++S  A+I+G+  +G    ++ LF ++++  
Sbjct: 719 LCNALINFHARCGSLPRAQQLFDEMPAKSIVSWTALITGHGMHGNGGVAVSLFERMVSEG 778

Query: 307 ERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAAR 366
              ++  +VG+           L+ C H+     G +  S+              ME+  
Sbjct: 779 IHPDNVAMVGV-----------LSACSHAGLYDEGRMYFST--------------MESVY 813

Query: 367 KLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVS---SILSACA 423
           KL       +L  +  ++    + G  EEA  L   M      P P   +   ++L AC 
Sbjct: 814 KL-----RPTLEHYTCIVDLLGRAGRLEEARELISSM------PMPADGAVWGALLGACK 862

Query: 424 QLGAISLGKWVHELV---KSRN-----FESNIYVSTALIDMYAKCGNIVEAREL 469
               + +G+     V   + RN       SNIY  T  +D  A+   ++  R L
Sbjct: 863 IHKNVEIGEEAFARVVELEPRNVGYYVLMSNIYTDTGQLDCVARVRAVMRKRGL 916


>gi|224108029|ref|XP_002314694.1| predicted protein [Populus trichocarpa]
 gi|222863734|gb|EEF00865.1| predicted protein [Populus trichocarpa]
          Length = 631

 Score =  414 bits (1063), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 230/633 (36%), Positives = 346/633 (54%), Gaps = 2/633 (0%)

Query: 152 LYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDST 211
           +Y K      A+ +    P +  V W ++ISG ++N  F  ++  F  M R      D T
Sbjct: 1   MYSKLDLPNPAQLLLQLTPTRCVVTWTALISGSVQNGYFSSALLYFSKMRRENIKPNDFT 60

Query: 212 SVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDI 271
              A   + A       G +I  + LKLG  +  +V       YSK G    A+ LF ++
Sbjct: 61  FPCAFKASTALCLPF-AGKQIHAIALKLGQINDKFVGCSAFDMYSKTGLKFEAQRLFDEM 119

Query: 272 VRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTN 331
              ++   NA IS    +G+   ++  F +        +  T    +        L L  
Sbjct: 120 PPRNVAVWNAYISNAVLDGRPGKAIDKFIEFRRVGGEPDLITFCAFLNACADARCLDLGR 179

Query: 332 CIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNG 391
            +H   ++SG   + SV   +  VY +  E+E A  +F+    ++  SW  M+A   QN 
Sbjct: 180 QLHGLVIRSGFEGDVSVANGIIDVYGKCKEVELAEMVFNGMGRRNSVSWCTMVAACEQND 239

Query: 392 LTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVST 451
             E+A  +F   +   +      VSS++SA A +  +  G+ VH L      E +I+V +
Sbjct: 240 EKEKACVVFLMGRKEGIELTDYMVSSVISAYAGISGLEFGRSVHALAVKACVEGDIFVGS 299

Query: 452 ALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRP 511
           AL+DMY KCG+I +  ++F  M  ++ V+WN MISGY   G    A+ LF EM    +  
Sbjct: 300 ALVDMYGKCGSIEDCEQVFHEMPERNLVSWNAMISGYAHQGDVDMAMTLFEEMQSEAV-A 358

Query: 512 SGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEF 571
           + VT + VL ACS  G V+ G+EIF+SM   +  +P AEHYAC+ D+LGRAG +E+A EF
Sbjct: 359 NYVTLICVLSACSRGGAVKLGNEIFESMRDRYRIEPGAEHYACIADMLGRAGMVERAYEF 418

Query: 572 IKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDY 631
           ++ + + P  +VWGALL AC ++ +  L ++A++ LF+LDP++ G HVLLSN+++A   +
Sbjct: 419 VQKMPIRPTISVWGALLNACRVYGEPELGKIAADNLFKLDPKDSGNHVLLSNMFAAAGRW 478

Query: 632 LQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREA 691
            +A  VR+ +K   + K  GC+ +      HVF + D  H +++ I AML KL  +M+ A
Sbjct: 479 DEATLVRKEMKDVGIKKGAGCSWVTAKNKVHVFQAKDTSHERNSEIQAMLVKLRTEMQAA 538

Query: 692 GFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTAT 751
           G+  +T  AL+D+EEEEK   +  HSEK+A+AFGLIA  PG  IRI KNLR+C DCH+A 
Sbjct: 539 GYMPDTNYALYDLEEEEKMTEVGYHSEKIALAFGLIALPPGVPIRITKNLRICGDCHSAF 598

Query: 752 KFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           KFIS + GR I+VRD NRFH F+   CSC D+W
Sbjct: 599 KFISGIVGREIIVRDNNRFHRFRDSQCSCRDFW 631



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 120/436 (27%), Positives = 216/436 (49%), Gaps = 5/436 (1%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           A+ L    P   +  +  +I G   N    S++ +++ +R+   + P++FT+     A++
Sbjct: 11  AQLLLQLTPTRCVVTWTALISGSVQNGYFSSALLYFSKMRREN-IKPNDFTFPCAFKAST 69

Query: 120 ACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNS 179
           A C    G  +H  A+  G  +D FVG +  D+Y K      A+++FD+MP ++  +WN+
Sbjct: 70  ALCLPFAGKQIHAIALKLGQINDKFVGCSAFDMYSKTGLKFEAQRLFDEMPPRNVAVWNA 129

Query: 180 MISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKL 239
            IS  + +     +I  F +  R GG   D  +  A L A A+ + L LG ++  L ++ 
Sbjct: 130 YISNAVLDGRPGKAIDKFIEFRRVGGE-PDLITFCAFLNACADARCLDLGRQLHGLVIRS 188

Query: 240 GFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLF 299
           GF   V V  G++  Y KC EVE AE++F  + R + +S   M++    N + E +  +F
Sbjct: 189 GFEGDVSVANGIIDVYGKCKEVELAEMVFNGMGRRNSVSWCTMVAACEQNDEKEKACVVF 248

Query: 300 RQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRL 359
                    +    +  +I  +     L     +H+  +K+ +  +  V +AL  +Y + 
Sbjct: 249 LMGRKEGIELTDYMVSSVISAYAGISGLEFGRSVHALAVKACVEGDIFVGSALVDMYGKC 308

Query: 360 NEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSIL 419
             +E   ++F E  E++L SWNAMI+GY   G  + A++LF+EMQ+  VA N VT+  +L
Sbjct: 309 GSIEDCEQVFHEMPERNLVSWNAMISGYAHQGDVDMAMTLFEEMQSEAVA-NYVTLICVL 367

Query: 420 SACAQLGAISLGKWVHELVKSR-NFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSE 478
           SAC++ GA+ LG  + E ++ R   E        + DM  + G +  A E    M  +  
Sbjct: 368 SACSRGGAVKLGNEIFESMRDRYRIEPGAEHYACIADMLGRAGMVERAYEFVQKMPIRPT 427

Query: 479 VT-WNTMISGYGLHGH 493
           ++ W  +++   ++G 
Sbjct: 428 ISVWGALLNACRVYGE 443



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 68/285 (23%), Positives = 126/285 (44%), Gaps = 7/285 (2%)

Query: 12  FLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPD 71
           FL+    A+      Q H  +I  GF+ D+S    +       K    A  +F  + + +
Sbjct: 165 FLNACADARCLDLGRQLHGLVIRSGFEGDVSVANGIIDVYGKCKEVELAEMVFNGMGRRN 224

Query: 72  LFLFNVIIRGF-SNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLL 130
              +  ++     N+E  K+ + F    ++   LT  ++  S V+SA +       G  +
Sbjct: 225 SVSWCTMVAACEQNDEKEKACVVFLMGRKEGIELT--DYMVSSVISAYAGISGLEFGRSV 282

Query: 131 HGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCF 190
           H  A+ +    D+FVG+ALVD+Y K   ++   +VF +MPE++ V WN+MISG       
Sbjct: 283 HALAVKACVEGDIFVGSALVDMYGKCGSIEDCEQVFHEMPERNLVSWNAMISGYAHQGDV 342

Query: 191 QDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEI-QCLGLKLGFHDHVYVLT 249
             ++ +F +M        +  ++  VL A +    ++LG EI + +  +           
Sbjct: 343 DMAMTLFEEMQSEAVA--NYVTLICVLSACSRGGAVKLGNEIFESMRDRYRIEPGAEHYA 400

Query: 250 GLVSFYSKCGEVERA-ELLFRDIVRPDLISCNAMISGYTCNGKTE 293
            +     + G VERA E + +  +RP +    A+++     G+ E
Sbjct: 401 CIADMLGRAGMVERAYEFVQKMPIRPTISVWGALLNACRVYGEPE 445


>gi|356532944|ref|XP_003535029.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like [Glycine max]
          Length = 813

 Score =  413 bits (1062), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 240/667 (35%), Positives = 379/667 (56%), Gaps = 2/667 (0%)

Query: 36  GFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFY 95
           GF  DL   + L    +D      AR +F  +P  D  L+NV++RG+  +    ++I  +
Sbjct: 142 GFHVDLFAGSALIKLYADNGYIRDARRVFDELPLRDTILWNVMLRGYVKSGDFDNAIGTF 201

Query: 96  THLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFK 155
             +R + ++  ++ TY+ +LS  +   +   G  LHG  I SG+  D  V   LV +Y K
Sbjct: 202 CEMRTSYSMV-NSVTYTCILSICATRGNFCAGTQLHGLVIGSGFEFDPQVANTLVAMYSK 260

Query: 156 FSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAA 215
              +  ARK+F+ MP+ DTV WN +I+G ++N    ++  +F  M+ + G   DS + A+
Sbjct: 261 CGNLLYARKLFNTMPQTDTVTWNGLIAGYVQNGFTDEAAPLFNAMI-SAGVKPDSVTFAS 319

Query: 216 VLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPD 275
            LP++ E   LR   E+    ++      VY+ + L+  Y K G+VE A  +F+  +  D
Sbjct: 320 FLPSILESGSLRHCKEVHSYIVRHRVPFDVYLKSALIDVYFKGGDVEMARKIFQQNILVD 379

Query: 276 LISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHS 335
           +  C AMISGY  +G    ++  FR L+      NS T+  ++P       L     +H 
Sbjct: 380 VAVCTAMISGYVLHGLNIDAINTFRWLIQEGMVTNSLTMASVLPACAAVAALKPGKELHC 439

Query: 336 FCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEE 395
             LK  + +  +V +A++ +Y++   ++ A + F   S++    WN+MI+ ++QNG  E 
Sbjct: 440 HILKKRLENIVNVGSAITDMYAKCGRLDLAYEFFRRMSDRDSVCWNSMISSFSQNGKPEI 499

Query: 396 AISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALID 455
           AI LF++M  S    + V++SS LSA A L A+  GK +H  V    F S+ +V++ LID
Sbjct: 500 AIDLFRQMGMSGAKFDSVSLSSALSAAANLPALYYGKEMHGYVIRNAFSSDTFVASTLID 559

Query: 456 MYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVT 515
           MY+KCGN+  A  +F+LM  K+EV+WN++I+ YG HG   E L L+ EML +GI P  VT
Sbjct: 560 MYSKCGNLALAWCVFNLMDGKNEVSWNSIIAAYGNHGCPRECLDLYHEMLRAGIHPDHVT 619

Query: 516 FLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGL 575
           FL ++ AC HAGLV EG   F  M  ++G     EHYACMVD+ GRAG++ +A + IK +
Sbjct: 620 FLVIISACGHAGLVDEGIHYFHCMTREYGIGARMEHYACMVDLYGRAGRVHEAFDTIKSM 679

Query: 576 AVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAA 635
              P   VWG LLGAC +H +  LA++AS  L ELDP+N GY+VLLSN+++   ++    
Sbjct: 680 PFTPDAGVWGTLLGACRLHGNVELAKLASRHLLELDPKNSGYYVLLSNVHADAGEWASVL 739

Query: 636 TVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQT 695
            VR ++K++ + K PG + I+V G  H+F++ D  HP+S  IY +L+ L  ++R+ G+  
Sbjct: 740 KVRSLMKEKGVQKIPGYSWIDVNGGTHMFSAADGNHPESVEIYLILKSLLLELRKQGYVP 799

Query: 696 ETVTALH 702
           +    LH
Sbjct: 800 QPYLPLH 806



 Score =  243 bits (621), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 153/512 (29%), Positives = 265/512 (51%), Gaps = 15/512 (2%)

Query: 5   TPQSRNLFLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTK------LAHRLSDFKATC 58
           T Q  +LF +    +  Q Q  Q H Q+I+ G  +  +  ++      L  R  D     
Sbjct: 11  TTQLESLFRACSDASMVQ-QARQVHTQVIVGGMGDVCAPSSRVLGLYVLCGRFRD----- 64

Query: 59  YARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAA 118
            A  LFF +       +N +IRG         ++ FY  +   + ++PD +T+ +V+ A 
Sbjct: 65  -AGNLFFELELRYALPWNWMIRGLYMLGWFDFALLFYFKML-GSNVSPDKYTFPYVIKAC 122

Query: 119 SACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWN 178
               +  + +++H  A   G+  DLF G+AL+ LY    +++ AR+VFD++P +DT+LWN
Sbjct: 123 GGLNNVPLCMVVHDTARSLGFHVDLFAGSALIKLYADNGYIRDARRVFDELPLRDTILWN 182

Query: 179 SMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLK 238
            M+ G +K+  F ++I  F +M R   + ++S +   +L   A       G ++  L + 
Sbjct: 183 VMLRGYVKSGDFDNAIGTFCEM-RTSYSMVNSVTYTCILSICATRGNFCAGTQLHGLVIG 241

Query: 239 LGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRL 298
            GF     V   LV+ YSKCG +  A  LF  + + D ++ N +I+GY  NG T+ +  L
Sbjct: 242 SGFEFDPQVANTLVAMYSKCGNLLYARKLFNTMPQTDTVTWNGLIAGYVQNGFTDEAAPL 301

Query: 299 FRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSR 358
           F  ++++  + +S T    +P     G L     +HS+ ++  +  +  + +AL  VY +
Sbjct: 302 FNAMISAGVKPDSVTFASFLPSILESGSLRHCKEVHSYIVRHRVPFDVYLKSALIDVYFK 361

Query: 359 LNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSI 418
             ++E ARK+F ++    +A   AMI+GY  +GL  +AI+ F+ +    +  N +T++S+
Sbjct: 362 GGDVEMARKIFQQNILVDVAVCTAMISGYVLHGLNIDAINTFRWLIQEGMVTNSLTMASV 421

Query: 419 LSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSE 478
           L ACA + A+  GK +H  +  +  E+ + V +A+ DMYAKCG +  A E F  MS +  
Sbjct: 422 LPACAAVAALKPGKELHCHILKKRLENIVNVGSAITDMYAKCGRLDLAYEFFRRMSDRDS 481

Query: 479 VTWNTMISGYGLHGHGLEALQLFSEMLHSGIR 510
           V WN+MIS +  +G    A+ LF +M  SG +
Sbjct: 482 VCWNSMISSFSQNGKPEIAIDLFRQMGMSGAK 513



 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 127/478 (26%), Positives = 226/478 (47%), Gaps = 14/478 (2%)

Query: 120 ACCDRSI---GVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVL 176
           AC D S+      +H   IV G G      + ++ LY      + A  +F ++  +  + 
Sbjct: 20  ACSDASMVQQARQVHTQVIVGGMGDVCAPSSRVLGLYVLCGRFRDAGNLFFELELRYALP 79

Query: 177 WNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLG 236
           WN MI GL     F  ++  +  M+ +  +  D  +   V+ A   +  + L M +    
Sbjct: 80  WNWMIRGLYMLGWFDFALLFYFKMLGSNVS-PDKYTFPYVIKACGGLNNVPLCMVVHDTA 138

Query: 237 LKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSL 296
             LGFH  ++  + L+  Y+  G +  A  +F ++   D I  N M+ GY  +G  ++++
Sbjct: 139 RSLGFHVDLFAGSALIKLYADNGYIRDARRVFDELPLRDTILWNVMLRGYVKSGDFDNAI 198

Query: 297 RLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVY 356
             F ++  S   VNS T   ++ +    G+      +H   + SG   +  V   L  +Y
Sbjct: 199 GTFCEMRTSYSMVNSVTYTCILSICATRGNFCAGTQLHGLVIGSGFEFDPQVANTLVAMY 258

Query: 357 SRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVS 416
           S+   +  ARKLF+   +    +WN +IAGY QNG T+EA  LF  M ++ V P+ VT +
Sbjct: 259 SKCGNLLYARKLFNTMPQTDTVTWNGLIAGYVQNGFTDEAAPLFNAMISAGVKPDSVTFA 318

Query: 417 SILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHK 476
           S L +  + G++   K VH  +       ++Y+ +ALID+Y K G++  AR++F      
Sbjct: 319 SFLPSILESGSLRHCKEVHSYIVRHRVPFDVYLKSALIDVYFKGGDVEMARKIFQQNILV 378

Query: 477 SEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIF 536
                  MISGY LHG  ++A+  F  ++  G+  + +T  SVL AC+    ++ G E  
Sbjct: 379 DVAVCTAMISGYVLHGLNIDAINTFRWLIQEGMVTNSLTMASVLPACAAVAALKPGKE-- 436

Query: 537 QSMIHDHGFKPLAEHY----ACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGA 590
              +H H  K   E+     + + D+  + G+L+ A EF + ++ +     W +++ +
Sbjct: 437 ---LHCHILKKRLENIVNVGSAITDMYAKCGRLDLAYEFFRRMS-DRDSVCWNSMISS 490


>gi|242062682|ref|XP_002452630.1| hypothetical protein SORBIDRAFT_04g029423 [Sorghum bicolor]
 gi|241932461|gb|EES05606.1| hypothetical protein SORBIDRAFT_04g029423 [Sorghum bicolor]
          Length = 605

 Score =  413 bits (1062), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 212/544 (38%), Positives = 316/544 (58%), Gaps = 8/544 (1%)

Query: 242 HDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQ 301
           H        L+S +  CG+++ A  +F  +   D+ S N M+SG + NG  E +  +FR 
Sbjct: 69  HPDAVSYNTLLSCHFACGDIDGAWRVFSTMPVRDVTSWNTMVSGLSKNGAIEEAEAMFRA 128

Query: 302 LLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNE 361
           + A     N+ +   ++      G +       +    +   +++ + TA+ + Y     
Sbjct: 129 MPAR----NAVSWNAMVAARASSGDM---GAAENLFRNAPEKTDAILWTAMVSGYMDTGN 181

Query: 362 MEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEM-QASKVAPNPVTVSSILS 420
           ++ A + F     ++L SWNA++AGY +N    +A+ +F+ M + + V PNP T+SS+L 
Sbjct: 182 VQKAMEYFRAMPVRNLVSWNAVVAGYVKNSRAGDALRVFKTMVEDAIVQPNPSTLSSVLL 241

Query: 421 ACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVT 480
            C+ L A+  G+ VH+         +I V T+L+ MY KCG++ +A +LFD M  K  V 
Sbjct: 242 GCSNLSALGFGRQVHQWCMKLPLGRSITVGTSLLSMYCKCGDLDDACKLFDEMHTKDIVA 301

Query: 481 WNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMI 540
           WN MISGY  HG G +A++LF +M   G+ P  +T L+VL AC H GL   G + F++M 
Sbjct: 302 WNAMISGYAQHGGGRKAIKLFEKMKDEGVVPDWITLLAVLTACIHTGLCDFGIQCFETMQ 361

Query: 541 HDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLA 600
             +  +P  +HY+CMVD+L RAG LE+A+  I  +  EP P+ +G LL AC ++K+   A
Sbjct: 362 EAYNIEPQVDHYSCMVDLLCRAGLLERAVNMIHSMPFEPHPSAYGTLLTACRVYKNLEFA 421

Query: 601 RVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGT 660
             A+ KL E DP+N G +V L+NIY+    +   + VR+ +K   + K PG + +E+ G 
Sbjct: 422 EFAARKLIEQDPQNAGAYVQLANIYAVANRWDDVSRVRRWMKDNAVVKTPGYSWMEIKGV 481

Query: 661 PHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKL 720
            H F S D+LHPQ   I+  L++L   M+  G+  +   ALHDVEE  K  M+  HSEKL
Sbjct: 482 RHEFRSNDRLHPQLDLIHDKLDRLGKLMKAMGYSPDLDFALHDVEESLKSQMLMRHSEKL 541

Query: 721 AIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSC 780
           AIAFGLI+T PG  +RI KNLR+C DCH A K ISK+  R I++RD  RFHHF+GG CSC
Sbjct: 542 AIAFGLISTSPGMTLRIFKNLRICGDCHNAAKLISKIEDREIILRDTTRFHHFRGGHCSC 601

Query: 781 GDYW 784
           GDYW
Sbjct: 602 GDYW 605



 Score =  139 bits (351), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 96/350 (27%), Positives = 170/350 (48%), Gaps = 26/350 (7%)

Query: 129 LLHGHAIVSGYG--------------SDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDT 174
           LL G+A  SG G               D      L+  +F    +  A +VF  MP +D 
Sbjct: 44  LLAGYAKASGPGRLADARRLFDSIPHPDAVSYNTLLSCHFACGDIDGAWRVFSTMPVRDV 103

Query: 175 VLWNSMISGLMKNCCFQDSIWVFGDM-VRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQ 233
             WN+M+SGL KN   +++  +F  M  RN  +W    +  A    +   + L      +
Sbjct: 104 TSWNTMVSGLSKNGAIEEAEAMFRAMPARNAVSWNAMVAARASSGDMGAAENLFRNAPEK 163

Query: 234 CLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTE 293
              +         + T +VS Y   G V++A   FR +   +L+S NA+++GY  N +  
Sbjct: 164 TDAI---------LWTAMVSGYMDTGNVQKAMEYFRAMPVRNLVSWNAVVAGYVKNSRAG 214

Query: 294 SSLRLFRQLLASA-ERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTAL 352
            +LR+F+ ++  A  + N ST+  ++        L     +H +C+K  +  + +V T+L
Sbjct: 215 DALRVFKTMVEDAIVQPNPSTLSSVLLGCSNLSALGFGRQVHQWCMKLPLGRSITVGTSL 274

Query: 353 STVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNP 412
            ++Y +  +++ A KLFDE   K + +WNAMI+GY Q+G   +AI LF++M+   V P+ 
Sbjct: 275 LSMYCKCGDLDDACKLFDEMHTKDIVAWNAMISGYAQHGGGRKAIKLFEKMKDEGVVPDW 334

Query: 413 VTVSSILSACAQLGAISLGKWVHELVK-SRNFESNIYVSTALIDMYAKCG 461
           +T+ ++L+AC   G    G    E ++ + N E  +   + ++D+  + G
Sbjct: 335 ITLLAVLTACIHTGLCDFGIQCFETMQEAYNIEPQVDHYSCMVDLLCRAG 384



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 83/360 (23%), Positives = 165/360 (45%), Gaps = 41/360 (11%)

Query: 63  LFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACC 122
           +F ++P  D+  +N ++ G S N   + +   +  +    A++     ++ +++A ++  
Sbjct: 94  VFSTMPVRDVTSWNTMVSGLSKNGAIEEAEAMFRAMPARNAVS-----WNAMVAARASSG 148

Query: 123 DRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMIS 182
           D      L  +A      +D  +  A+V  Y     V+ A + F  MP ++ V WN++++
Sbjct: 149 DMGAAENLFRNAPEK---TDAILWTAMVSGYMDTGNVQKAMEYFRAMPVRNLVSWNAVVA 205

Query: 183 GLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFH 242
           G +KN    D++ VF  MV +     + +++++VL   + +  L  G ++    +KL   
Sbjct: 206 GYVKNSRAGDALRVFKTMVEDAIVQPNPSTLSSVLLGCSNLSALGFGRQVHQWCMKLPLG 265

Query: 243 DHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQL 302
             + V T L+S Y KCG+++ A  LF ++   D+++ NAMISGY  +G    +++LF ++
Sbjct: 266 RSITVGTSLLSMYCKCGDLDDACKLFDEMHTKDIVAWNAMISGYAQHGGGRKAIKLFEKM 325

Query: 303 LASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEM 362
                        G++P +     + LT CIH+     GI                   M
Sbjct: 326 KDE----------GVVPDWITLLAV-LTACIHTGLCDFGIQC--------------FETM 360

Query: 363 EAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSAC 422
           + A  +     E  +  ++ M+    + GL E A+++   M      P+P    ++L+AC
Sbjct: 361 QEAYNI-----EPQVDHYSCMVDLLCRAGLLERAVNMIHSM---PFEPHPSAYGTLLTAC 412


>gi|224116778|ref|XP_002331875.1| predicted protein [Populus trichocarpa]
 gi|222875393|gb|EEF12524.1| predicted protein [Populus trichocarpa]
          Length = 675

 Score =  413 bits (1062), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 225/627 (35%), Positives = 351/627 (55%), Gaps = 15/627 (2%)

Query: 161 SARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMV-RNGGTWLDSTSVAAVLPA 219
            A K+FD+M  +D V WNSMI G +       +  +F +M  +N  +W    +       
Sbjct: 61  DALKLFDRMSVRDVVSWNSMIKGCLDCGNLGMATRLFDEMPEKNVISWTTMVNGYLKFGR 120

Query: 220 VAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISC 279
           V   Q L L M ++           V     +V  Y + G VE    LF ++   D+IS 
Sbjct: 121 VELAQRLFLDMHVK----------DVAAWNAMVHGYFENGRVEEGVRLFEEMPVRDVISW 170

Query: 280 NAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLK 339
            +MI G   NGK+E +L +F+++L S      ST   ++         +L   +H   +K
Sbjct: 171 TSMIGGLDLNGKSEEALFVFKKMLRSGVEPTWSTFACVLSACANAVEFNLGVQVHGHVVK 230

Query: 340 SGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISL 399
            G   +  +  +L T Y+   ++E A K+F+E+  K++  W A++  Y  N   ++A+ +
Sbjct: 231 LGCFFHEFISVSLITFYANCMKIEHAHKIFNETLTKNVVKWTALLTAYVWNNKHQDALRV 290

Query: 400 FQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAK 459
           F +M      PN  T S  L AC  L A+  GK +H +      E++++V  +L+ MY +
Sbjct: 291 FGDMTKMGALPNQSTFSITLKACCGLEALDKGKEIHTMAIKLGLETDVFVGNSLVVMYTE 350

Query: 460 CGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSV 519
           CGN+  A  +F  ++ K  V+WN++I G   HG GL AL  F++M+  G+ P+ +TF  +
Sbjct: 351 CGNVNSAVAVFRNINEKDIVSWNSIIVGSAQHGFGLWALIFFNQMIRRGVDPNEITFTGL 410

Query: 520 LYACSHAGLVREGDEIFQ--SMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAV 577
           L ACS +G++ +G   F+  S    +  +P  +HYACMVDILGR G+L++A E ++ + V
Sbjct: 411 LSACSRSGMLLKGRCFFEYISRYKSNVLRP--QHYACMVDILGRCGKLDEAEELVRYMPV 468

Query: 578 EPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATV 637
           +    +W ALL AC +H +  +A  A++ + +L+P     +VLLSNIY++   +   + +
Sbjct: 469 KANSMIWLALLSACRVHSNLEVAERAAKHILDLEPNCSSAYVLLSNIYASAGRWADVSRM 528

Query: 638 RQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTET 697
           R  +K+  L K PG + + + G  H F S D+ HP S  IY  L+ L  K++E G+  + 
Sbjct: 529 RVKMKQGGLVKQPGSSWVVLRGKKHEFLSADRSHPLSERIYEKLDWLGKKLKEFGYVPDQ 588

Query: 698 VTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKV 757
             ALHDVE+E+KE M+  HSE+LAIAFGL++T  G+ I ++KNLRVC DCH+  K +SK+
Sbjct: 589 KFALHDVEDEQKEEMLSFHSERLAIAFGLVSTVEGSTITVMKNLRVCGDCHSVIKLMSKI 648

Query: 758 TGRVIVVRDANRFHHFKGGVCSCGDYW 784
            GR IVVRD+ RFHHFK G+CSC DYW
Sbjct: 649 VGRKIVVRDSGRFHHFKNGICSCSDYW 675



 Score =  172 bits (435), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 123/486 (25%), Positives = 230/486 (47%), Gaps = 44/486 (9%)

Query: 41  LSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRK 100
           LS  T LA+ L + +    AR +F  IP P+L L+  +I G++ N+    ++  +  +  
Sbjct: 13  LSYTTSLANHLKNQRLD-QARLIFDKIPSPNLHLYTKMIAGYTRNDRLCDALKLFDRMS- 70

Query: 101 NTALTPDNFTYSFVLSAASACCDRSIGVLLHGH----------AIVSGY----------- 139
                 D  +++ ++     C +  +   L              +V+GY           
Sbjct: 71  ----VRDVVSWNSMIKGCLDCGNLGMATRLFDEMPEKNVISWTTMVNGYLKFGRVELAQR 126

Query: 140 ------GSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDS 193
                   D+    A+V  YF+   V+   ++F++MP +D + W SMI GL  N   +++
Sbjct: 127 LFLDMHVKDVAAWNAMVHGYFENGRVEEGVRLFEEMPVRDVISWTSMIGGLDLNGKSEEA 186

Query: 194 IWVFGDMVRNG--GTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGL 251
           ++VF  M+R+G   TW   ++ A VL A A   E  LG+++    +KLG   H ++   L
Sbjct: 187 LFVFKKMLRSGVEPTW---STFACVLSACANAVEFNLGVQVHGHVVKLGCFFHEFISVSL 243

Query: 252 VSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNS 311
           ++FY+ C ++E A  +F + +  +++   A+++ Y  N K + +LR+F  +       N 
Sbjct: 244 ITFYANCMKIEHAHKIFNETLTKNVVKWTALLTAYVWNNKHQDALRVFGDMTKMGALPNQ 303

Query: 312 STIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDE 371
           ST    +        L     IH+  +K G+ ++  V  +L  +Y+    + +A  +F  
Sbjct: 304 STFSITLKACCGLEALDKGKEIHTMAIKLGLETDVFVGNSLVVMYTECGNVNSAVAVFRN 363

Query: 372 SSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLG 431
            +EK + SWN++I G  Q+G    A+  F +M    V PN +T + +LSAC++ G +  G
Sbjct: 364 INEKDIVSWNSIIVGSAQHGFGLWALIFFNQMIRRGVDPNEITFTGLLSACSRSGMLLKG 423

Query: 432 KWVHELVKSRNFESNIYVS---TALIDMYAKCGNIVEARELFDLMSHKSE-VTWNTMISG 487
           +   E +    ++SN+        ++D+  +CG + EA EL   M  K+  + W  ++S 
Sbjct: 424 RCFFEYIS--RYKSNVLRPQHYACMVDILGRCGKLDEAEELVRYMPVKANSMIWLALLSA 481

Query: 488 YGLHGH 493
             +H +
Sbjct: 482 CRVHSN 487



 Score = 85.9 bits (211), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 54/182 (29%), Positives = 93/182 (51%), Gaps = 8/182 (4%)

Query: 345 NSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQ 404
           N  + T +   Y+R + +  A KLFD  S + + SWN+MI G    G    A  LF EM 
Sbjct: 42  NLHLYTKMIAGYTRNDRLCDALKLFDRMSVRDVVSWNSMIKGCLDCGNLGMATRLFDEMP 101

Query: 405 ASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIV 464
                 N ++ +++++   + G + L + +   +  +    ++    A++  Y + G + 
Sbjct: 102 EK----NVISWTTMVNGYLKFGRVELAQRLFLDMHVK----DVAAWNAMVHGYFENGRVE 153

Query: 465 EARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACS 524
           E   LF+ M  +  ++W +MI G  L+G   EAL +F +ML SG+ P+  TF  VL AC+
Sbjct: 154 EGVRLFEEMPVRDVISWTSMIGGLDLNGKSEEALFVFKKMLRSGVEPTWSTFACVLSACA 213

Query: 525 HA 526
           +A
Sbjct: 214 NA 215


>gi|224118652|ref|XP_002331415.1| predicted protein [Populus trichocarpa]
 gi|222873629|gb|EEF10760.1| predicted protein [Populus trichocarpa]
          Length = 458

 Score =  413 bits (1062), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 203/453 (44%), Positives = 301/453 (66%), Gaps = 1/453 (0%)

Query: 333 IHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGL 392
           +HS   K G  +   +   L  +Y++  ++ +ARK+FD +  K++  W ++I GYT  G 
Sbjct: 6   LHSLIFKCGCENKDPLDNLLLGMYAKCGDLISARKVFDMALVKTVFLWTSIIGGYTHMGY 65

Query: 393 TEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTA 452
             EA+ LF+++  + + PN  T+++ILSACA LG++ +GK + E + S  F+S+  V T+
Sbjct: 66  PAEALLLFKKLLKTAIKPNGATLATILSACADLGSLDMGKEIEEYILSNGFQSDRQVQTS 125

Query: 453 LIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLH-SGIRP 511
           LI M++KCG+I +A  +F+ +S K    W++MI+GY +HG   EAL LF +ML    I+P
Sbjct: 126 LIHMFSKCGSIGKAISVFERISDKDLAAWSSMINGYAIHGMAEEALGLFHKMLEIKEIKP 185

Query: 512 SGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEF 571
             V F S+L ACSH GLV +G + F+SM  D G  P  EHY C+VD+LGRAGQ E AL+ 
Sbjct: 186 DAVVFTSILLACSHVGLVEDGLKFFKSMQKDFGIVPSVEHYMCLVDLLGRAGQFELALKT 245

Query: 572 IKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDY 631
           I+ + V+    VW   L AC  H +  L  +A+ KL  ++P +   +VL++N+Y++   +
Sbjct: 246 IRVMPVKLQAQVWAPFLSACTKHCNLELGELAARKLLYMNPGSHANYVLMANLYTSMGKW 305

Query: 632 LQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREA 691
            +AA  R ++  R L KAPG + +E+ G+ HVF +GD+ H QS  IY  LE++N K+ EA
Sbjct: 306 KEAAVTRSLMIDRGLVKAPGWSQVEINGSVHVFIAGDRSHTQSIDIYKKLEEINLKLAEA 365

Query: 692 GFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTAT 751
           G+  ET T +HD+E EEKE  +KVHSE+LAIAFGLI+TE G+ +RI+KN R C+DCH+A 
Sbjct: 366 GYVPETDTVIHDLEREEKEEALKVHSERLAIAFGLISTEAGSTLRIMKNHRTCVDCHSAL 425

Query: 752 KFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           KFISK+TGR ++VRD +RFHHF+ G C+C D+W
Sbjct: 426 KFISKITGRHLIVRDGSRFHHFESGKCTCKDFW 458



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 68/244 (27%), Positives = 124/244 (50%), Gaps = 3/244 (1%)

Query: 251 LVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVN 310
           L+  Y+KCG++  A  +F   +   +    ++I GYT  G    +L LF++LL +A + N
Sbjct: 25  LLGMYAKCGDLISARKVFDMALVKTVFLWTSIIGGYTHMGYPAEALLLFKKLLKTAIKPN 84

Query: 311 SSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFD 370
            +T+  ++      G L +   I  + L +G  S+  V T+L  ++S+   +  A  +F+
Sbjct: 85  GATLATILSACADLGSLDMGKEIEEYILSNGFQSDRQVQTSLIHMFSKCGSIGKAISVFE 144

Query: 371 ESSEKSLASWNAMIAGYTQNGLTEEAISLFQEM-QASKVAPNPVTVSSILSACAQLGAIS 429
             S+K LA+W++MI GY  +G+ EEA+ LF +M +  ++ P+ V  +SIL AC+ +G + 
Sbjct: 145 RISDKDLAAWSSMINGYAIHGMAEEALGLFHKMLEIKEIKPDAVVFTSILLACSHVGLVE 204

Query: 430 LG-KWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEV-TWNTMISG 487
            G K+   + K      ++     L+D+  + G    A +   +M  K +   W   +S 
Sbjct: 205 DGLKFFKSMQKDFGIVPSVEHYMCLVDLLGRAGQFELALKTIRVMPVKLQAQVWAPFLSA 264

Query: 488 YGLH 491
              H
Sbjct: 265 CTKH 268



 Score = 73.2 bits (178), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 50/159 (31%), Positives = 79/159 (49%), Gaps = 1/159 (0%)

Query: 149 LVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWL 208
           L+ +Y K   + SARKVFD    K   LW S+I G   +  +     +    +       
Sbjct: 25  LLGMYAKCGDLISARKVFDMALVKTVFLWTSIIGGY-THMGYPAEALLLFKKLLKTAIKP 83

Query: 209 DSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLF 268
           +  ++A +L A A++  L +G EI+   L  GF     V T L+  +SKCG + +A  +F
Sbjct: 84  NGATLATILSACADLGSLDMGKEIEEYILSNGFQSDRQVQTSLIHMFSKCGSIGKAISVF 143

Query: 269 RDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAE 307
             I   DL + ++MI+GY  +G  E +L LF ++L   E
Sbjct: 144 ERISDKDLAAWSSMINGYAIHGMAEEALGLFHKMLEIKE 182



 Score = 56.2 bits (134), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 47/206 (22%), Positives = 95/206 (46%), Gaps = 2/206 (0%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           AR +F       +FL+  II G+++   P  ++         TA+ P+  T + +LSA +
Sbjct: 38  ARKVFDMALVKTVFLWTSIIGGYTHMGYPAEAL-LLFKKLLKTAIKPNGATLATILSACA 96

Query: 120 ACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNS 179
                 +G  +  + + +G+ SD  V  +L+ ++ K   +  A  VF+++ +KD   W+S
Sbjct: 97  DLGSLDMGKEIEEYILSNGFQSDRQVQTSLIHMFSKCGSIGKAISVFERISDKDLAAWSS 156

Query: 180 MISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGME-IQCLGLK 238
           MI+G   +   ++++ +F  M+       D+    ++L A + V  +  G++  + +   
Sbjct: 157 MINGYAIHGMAEEALGLFHKMLEIKEIKPDAVVFTSILLACSHVGLVEDGLKFFKSMQKD 216

Query: 239 LGFHDHVYVLTGLVSFYSKCGEVERA 264
            G    V     LV    + G+ E A
Sbjct: 217 FGIVPSVEHYMCLVDLLGRAGQFELA 242



 Score = 43.9 bits (102), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 38/164 (23%), Positives = 70/164 (42%), Gaps = 12/164 (7%)

Query: 32  IIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNEMPKSS 91
           I+ +GFQ+D    T L H  S   +   A ++F  I   DL  ++ +I G++ + M + +
Sbjct: 111 ILSNGFQSDRQVQTSLIHMFSKCGSIGKAISVFERISDKDLAAWSSMINGYAIHGMAEEA 170

Query: 92  ICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAA--- 148
           +  +  + +   + PD   ++ +L A S      +G++  G         D  +  +   
Sbjct: 171 LGLFHKMLEIKEIKPDAVVFTSILLACS-----HVGLVEDGLKFFKSMQKDFGIVPSVEH 225

Query: 149 ---LVDLYFKFSWVKSARKVFDKMPEK-DTVLWNSMISGLMKNC 188
              LVDL  +    + A K    MP K    +W   +S   K+C
Sbjct: 226 YMCLVDLLGRAGQFELALKTIRVMPVKLQAQVWAPFLSACTKHC 269


>gi|224082530|ref|XP_002306730.1| predicted protein [Populus trichocarpa]
 gi|222856179|gb|EEE93726.1| predicted protein [Populus trichocarpa]
          Length = 578

 Score =  413 bits (1062), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 210/527 (39%), Positives = 316/527 (59%), Gaps = 2/527 (0%)

Query: 259 GEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLI 318
           G +  A L F  I  P     NA+I G+  +    ++   ++ +++ + +V++ T   ++
Sbjct: 53  GNLSFAILTFSQIRTPSTNDWNAIIRGFIQSPNPTNAFAWYKSMISKSRKVDALTCSFVL 112

Query: 319 PVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLA 378
                      +  IH+  ++ G ++++ + T L  VY+++ E+++A K+FDE  ++ +A
Sbjct: 113 KACARVLARLESIQIHTHIVRKGFIADALLGTTLLDVYAKVGEIDSAEKVFDEMVKRDIA 172

Query: 379 SWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELV 438
           SWNA+I+G+ Q     EA+SLF+ M+     PN ++V   LSACAQLG    G+ +H  +
Sbjct: 173 SWNALISGFAQGSKPTEALSLFKRMEIDGFKPNEISVLGALSACAQLGDFKEGEKIHGYI 232

Query: 439 KSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMS-HKSEVTWNTMISGYGLHGHGLEA 497
           K   F+ N  V   +IDMYAKCG + +A  +F+ MS  K  VTWNTMI  + +HG G +A
Sbjct: 233 KVERFDMNAQVCNVVIDMYAKCGFVDKAYLVFESMSCRKDIVTWNTMIMAFAMHGEGCKA 292

Query: 498 LQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVD 557
           L+LF +M  SG+ P  V++L+VL AC+H GLV EG  +F SM  + G KP  +HY  +VD
Sbjct: 293 LELFEKMDQSGVSPDDVSYLAVLCACNHGGLVEEGFRLFNSM-ENCGVKPNVKHYGSVVD 351

Query: 558 ILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGY 617
           +LGRAG+L +A + +  +   P   +W  LLGA   H++  +A   S KL E+   + G 
Sbjct: 352 LLGRAGRLHEAYDIVNSMPTVPDIVLWQTLLGASRTHRNVEIAETVSRKLVEMGSNHCGD 411

Query: 618 HVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAI 677
            VLLSN+Y+A   +     VR+ +K R + K PG + IE  G  H F + D+ H     I
Sbjct: 412 FVLLSNVYAARERWADVGRVREAMKNRDVKKVPGLSYIEGNGVIHKFYNADKSHESWREI 471

Query: 678 YAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRI 737
           YA L+++  +++E G+  ET   LHD+ EE+KE ++  HSEKLA+AFGLI+T  GT I++
Sbjct: 472 YAKLDEIRFRVKEYGYVAETSFVLHDIGEEDKENVLGHHSEKLAVAFGLISTSEGTPIQV 531

Query: 738 IKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           IKNLR+C DCH   K ISK+  R I+VRD  RFH FK G CSC DYW
Sbjct: 532 IKNLRICGDCHFVIKLISKIYDREIIVRDRVRFHRFKEGFCSCRDYW 578



 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 87/374 (23%), Positives = 177/374 (47%), Gaps = 8/374 (2%)

Query: 166 FDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQE 225
           F ++    T  WN++I G +++    ++   +  M+      +D+ + + VL A A V  
Sbjct: 62  FSQIRTPSTNDWNAIIRGFIQSPNPTNAFAWYKSMISKSRK-VDALTCSFVLKACARVLA 120

Query: 226 LRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISG 285
               ++I    ++ GF     + T L+  Y+K GE++ AE +F ++V+ D+ S NA+ISG
Sbjct: 121 RLESIQIHTHIVRKGFIADALLGTTLLDVYAKVGEIDSAEKVFDEMVKRDIASWNALISG 180

Query: 286 YTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSN 345
           +    K   +L LF+++     + N  +++G +      G       IH +        N
Sbjct: 181 FAQGSKPTEALSLFKRMEIDGFKPNEISVLGALSACAQLGDFKEGEKIHGYIKVERFDMN 240

Query: 346 SSVLTALSTVYSRLNEMEAARKLFDE-SSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQ 404
           + V   +  +Y++   ++ A  +F+  S  K + +WN MI  +  +G   +A+ LF++M 
Sbjct: 241 AQVCNVVIDMYAKCGFVDKAYLVFESMSCRKDIVTWNTMIMAFAMHGEGCKALELFEKMD 300

Query: 405 ASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIV 464
            S V+P+ V+  ++L AC   G +  G  +   +++   + N+    +++D+  + G + 
Sbjct: 301 QSGVSPDDVSYLAVLCACNHGGLVEEGFRLFNSMENCGVKPNVKHYGSVVDLLGRAGRLH 360

Query: 465 EARELFDLMSHKSEVT-WNTMISGYGLHGHGLEALQLFSEMLHSGIRPSG-VTFLSVLYA 522
           EA ++ + M    ++  W T++     H +   A  +  +++  G    G    LS +YA
Sbjct: 361 EAYDIVNSMPTVPDIVLWQTLLGASRTHRNVEIAETVSRKLVEMGSNHCGDFVLLSNVYA 420

Query: 523 C----SHAGLVREG 532
                +  G VRE 
Sbjct: 421 ARERWADVGRVREA 434



 Score =  109 bits (273), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 71/245 (28%), Positives = 123/245 (50%), Gaps = 3/245 (1%)

Query: 59  YARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAA 118
           +A   F  I  P    +N IIRGF  +  P ++  +Y  +   +    D  T SFVL A 
Sbjct: 57  FAILTFSQIRTPSTNDWNAIIRGFIQSPNPTNAFAWYKSMISKSRKV-DALTCSFVLKAC 115

Query: 119 SACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWN 178
           +    R   + +H H +  G+ +D  +G  L+D+Y K   + SA KVFD+M ++D   WN
Sbjct: 116 ARVLARLESIQIHTHIVRKGFIADALLGTTLLDVYAKVGEIDSAEKVFDEMVKRDIASWN 175

Query: 179 SMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLK 238
           ++ISG  +     +++ +F  M  +G    +  SV   L A A++ + + G +I      
Sbjct: 176 ALISGFAQGSKPTEALSLFKRMEIDGFK-PNEISVLGALSACAQLGDFKEGEKIHGYIKV 234

Query: 239 LGFHDHVYVLTGLVSFYSKCGEVERAELLFRDI-VRPDLISCNAMISGYTCNGKTESSLR 297
             F  +  V   ++  Y+KCG V++A L+F  +  R D+++ N MI  +  +G+   +L 
Sbjct: 235 ERFDMNAQVCNVVIDMYAKCGFVDKAYLVFESMSCRKDIVTWNTMIMAFAMHGEGCKALE 294

Query: 298 LFRQL 302
           LF ++
Sbjct: 295 LFEKM 299


>gi|225432810|ref|XP_002283562.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g43790-like [Vitis vinifera]
          Length = 590

 Score =  413 bits (1062), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 200/445 (44%), Positives = 288/445 (64%), Gaps = 8/445 (1%)

Query: 348 VLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNG--------LTEEAISL 399
           V  AL   Y++  ++ A R LF++ S+  LASWN++++ Y  N         L+ E ++L
Sbjct: 146 VQAALLNYYAKCGKVGACRYLFNQISKPDLASWNSILSAYVHNSGAICEDVSLSLEVLTL 205

Query: 400 FQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAK 459
           F EMQ S +  N VT+ +++SACA+LGA+S G W H  V   N + N +V TALIDMY+K
Sbjct: 206 FIEMQKSLIKANEVTLVALISACAELGALSQGAWAHVYVLKHNLKLNHFVGTALIDMYSK 265

Query: 460 CGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSV 519
           CG +  A +LFD + H+  + +N MI G+ +HG+G +AL LF +M   G+ P  VT +  
Sbjct: 266 CGCLDLACQLFDQLPHRDTLCYNAMIGGFAIHGYGHQALDLFKKMTLEGLAPDDVTLVVT 325

Query: 520 LYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEP 579
           + +CSH GLV EG ++F+SM   +G +P  EHY C+VD+LGRAG+L +A E +  + ++P
Sbjct: 326 MCSCSHVGLVEEGCDVFESMKEVYGVEPKLEHYGCLVDLLGRAGRLREAEERVLNMPMKP 385

Query: 580 GPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQ 639
              +W +LLGA  +H +  +  V  + L +L+PE  G +VLLSN+Y++   +     VR+
Sbjct: 386 NAVIWRSLLGAARVHGNLEIGEVVLKHLIQLEPETSGNYVLLSNMYASINRWDDVKRVRK 445

Query: 640 VVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVT 699
           ++K   + K PG +L+EVGG  H F  GD+ HP+S  IY  LE+++ ++ E G +  T+ 
Sbjct: 446 LMKDHGINKVPGSSLVEVGGAMHEFLMGDKTHPRSKEIYLKLEEMSRRLHEYGHKPRTLE 505

Query: 700 ALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTG 759
            L D+EEEEKE  +  HSE+LAIAF LIA+     IRIIKNLRVC DCHT++K ISK+  
Sbjct: 506 VLFDIEEEEKEDALSYHSERLAIAFALIASHHCAPIRIIKNLRVCGDCHTSSKLISKIYE 565

Query: 760 RVIVVRDANRFHHFKGGVCSCGDYW 784
           R I+VRD NRFHHFK G CSC DYW
Sbjct: 566 REIIVRDRNRFHHFKEGACSCSDYW 590



 Score =  112 bits (280), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 122/484 (25%), Positives = 204/484 (42%), Gaps = 48/484 (9%)

Query: 1   MSMKTPQSRNLFLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYA 60
           M    P S +  L LL+  KT   L Q HA +I  G       ++++   +S      +A
Sbjct: 1   MRGPNPSSNHPTLQLLEKCKTLDTLKQVHAHMITTGLIFHTYPLSRIL-LISSTIVFTHA 59

Query: 61  RALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICF--YTHLRKNTALTPDNFTYSFVLSAA 118
            ++F  IP P +FL+N +I   +N + P + I F  Y+ +  +T L P+ FT+  +  A 
Sbjct: 60  LSIFNHIPNPTIFLYNTLISSLANIK-PHTHIAFSLYSRVLTHTTLKPNGFTFPSLFKAC 118

Query: 119 SACCDRSIGVLLHGHAI-VSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLW 177
            +      G  LH H +       D FV AAL++ Y K   V + R +F+++ + D   W
Sbjct: 119 GSQPWLRHGRALHTHVLKFLEPTCDPFVQAALLNYYAKCGKVGACRYLFNQISKPDLASW 178

Query: 178 NSMISGLMKN--CCFQD---SIWVFGDMVRNGGTWLDSTSVA--AVLPAVAEVQELRLGM 230
           NS++S  + N     +D   S+ V    +    + + +  V   A++ A AE+  L  G 
Sbjct: 179 NSILSAYVHNSGAICEDVSLSLEVLTLFIEMQKSLIKANEVTLVALISACAELGALSQGA 238

Query: 231 EIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNG 290
                 LK     + +V T L+  YSKCG ++ A  LF  +   D +  NAMI G+  +G
Sbjct: 239 WAHVYVLKHNLKLNHFVGTALIDMYSKCGCLDLACQLFDQLPHRDTLCYNAMIGGFAIHG 298

Query: 291 KTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLT 350
               +L LF+++       +  T+V           + + +C H   ++ G      V  
Sbjct: 299 YGHQALDLFKKMTLEGLAPDDVTLV-----------VTMCSCSHVGLVEEG----CDVFE 343

Query: 351 ALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAP 410
           ++  VY                 E  L  +  ++    + G   EA      M    + P
Sbjct: 344 SMKEVY---------------GVEPKLEHYGCLVDLLGRAGRLREAEERVLNM---PMKP 385

Query: 411 NPVTVSSILSACAQLGAISLGKWV-HELVKSRNFESNIYVSTALIDMYAKCGNIVEAREL 469
           N V   S+L A    G + +G+ V   L++     S  YV   L +MYA      + + +
Sbjct: 386 NAVIWRSLLGAARVHGNLEIGEVVLKHLIQLEPETSGNYV--LLSNMYASINRWDDVKRV 443

Query: 470 FDLM 473
             LM
Sbjct: 444 RKLM 447


>gi|222617261|gb|EEE53393.1| hypothetical protein OsJ_36441 [Oryza sativa Japonica Group]
          Length = 1151

 Score =  413 bits (1062), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 248/742 (33%), Positives = 387/742 (52%), Gaps = 8/742 (1%)

Query: 5   TPQSRNLFLSLLKGAKTQSQLTQTHAQIIIHGFQNDL---STVTKLAHRLSDFKATCYAR 61
           TP   +  LS    A+  +Q    HAQ   HGF +++   + V  L  R   F+    A 
Sbjct: 142 TPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFR---LAE 198

Query: 62  ALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASAC 121
            +F  +P  D   FN +I G +     + ++  +  + + + L+PD  T S +L+A ++ 
Sbjct: 199 RVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEM-QFSGLSPDCVTISSLLAACASL 257

Query: 122 CDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMI 181
            D   G  LH +   +G  SD  +  +L+DLY K   V++A  +F+     + VLWN M+
Sbjct: 258 GDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLML 317

Query: 182 SGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGF 241
               +      S  +F  M +  G   +  +   +L      +E+ LG +I  L +K GF
Sbjct: 318 VAFGQINDLAKSFELFCQM-QAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGF 376

Query: 242 HDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQ 301
              +YV   L+  YSK G +E+A  +   +   D++S  +MI+GY  +   + +L  F++
Sbjct: 377 ESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKE 436

Query: 302 LLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNE 361
           +       ++  +   I        +     IH+    SG   + S+  AL  +Y+R   
Sbjct: 437 MQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGR 496

Query: 362 MEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSA 421
           +  A   F+E   K   + N +++G+ Q+GL EEA+ +F  M  S V  N  T  S LSA
Sbjct: 497 IREAFSSFEEMELKDGITGNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSA 556

Query: 422 CAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTW 481
            A L  I  GK +H  V          V  ALI +Y KCG+  +A+  F  MS ++EV+W
Sbjct: 557 SANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSW 616

Query: 482 NTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIH 541
           NT+I+    HG GLEAL LF +M   GI+P+ VTF+ VL ACSH GLV EG   F+SM  
Sbjct: 617 NTIITSCSQHGRGLEALDLFDQMKKEGIKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSD 676

Query: 542 DHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLAR 601
           ++G +P  +HYAC++DI GRAGQL++A +FI+ + +     VW  LL AC +HK+  +  
Sbjct: 677 EYGIRPRPDHYACVIDIFGRAGQLDRAKKFIEEMPIAADAMVWRTLLSACKVHKNIEVGE 736

Query: 602 VASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTP 661
            A++ L EL+P +   +VLLSN Y+    +     VR++++ R + K PG + IEV    
Sbjct: 737 FAAKHLLELEPHDSASYVLLSNAYAVTEKWANRDQVRKMMRDRGVRKEPGRSWIEVKNVV 796

Query: 662 HVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLA 721
           H F  GD+LHP +  IY  L  +N ++ + G++ E     HD E+E ++    VHSEKLA
Sbjct: 797 HAFFVGDRLHPLAEQIYNFLAVINDRVAKVGYKQEKYHLFHDKEQEGRDPTDLVHSEKLA 856

Query: 722 IAFGLIATEPGTEIRIIKNLRV 743
           + FGL++  P   +R+IKNLRV
Sbjct: 857 VTFGLMSLPPCMPLRVIKNLRV 878



 Score =  232 bits (592), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 148/537 (27%), Positives = 274/537 (51%), Gaps = 8/537 (1%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           AR +F  +   D   +  ++ G++ N + + ++  Y  + +   + P  +  S VLS+ +
Sbjct: 96  ARRVFEELSARDNVSWVAMLSGYAQNGLGEEALGLYRQMHR-AGVVPTPYVLSSVLSSCT 154

Query: 120 ACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNS 179
                + G L+H      G+ S++FVG A++ LY +    + A +VF  MP +DTV +N+
Sbjct: 155 KAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNT 214

Query: 180 MISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKL 239
           +ISG  +    + ++ +F +M +  G   D  +++++L A A + +L+ G ++     K 
Sbjct: 215 LISGHAQCGHGEHALEIFEEM-QFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKA 273

Query: 240 GFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLF 299
           G      +   L+  Y KCG+VE A ++F    R +++  N M+  +        S  LF
Sbjct: 274 GISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELF 333

Query: 300 RQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRL 359
            Q+ A+  R N  T   ++        + L   IHS  +K+G  S+  V   L  +YS+ 
Sbjct: 334 CQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKY 393

Query: 360 NEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSIL 419
             +E AR++ +   EK + SW +MIAGY Q+   ++A++ F+EMQ   + P+ + ++S +
Sbjct: 394 GWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAI 453

Query: 420 SACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEV 479
           S CA + A+  G  +H  +    +  ++ +  AL+++YA+CG I EA   F+ M  K  +
Sbjct: 454 SGCAGINAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEMELKDGI 513

Query: 480 TWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSM 539
           T N ++SG+   G   EAL++F  M  SG++ +  TF+S L A ++   +++G +I   +
Sbjct: 514 TGNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARV 573

Query: 540 IH-DHGFKPLAEHYACMVDILGRAGQLEKA-LEFIKGLAVEPGPAVWGALLGACMIH 594
           I   H F+   E    ++ + G+ G  E A +EF +    E     W  ++ +C  H
Sbjct: 574 IKTGHSFE--TEVGNALISLYGKCGSFEDAKMEFSE--MSERNEVSWNTIITSCSQH 626



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 144/502 (28%), Positives = 248/502 (49%), Gaps = 6/502 (1%)

Query: 81  GFSNNEMPKSSIC-FYTHLRKNTALTPDNFTYSFVLSAASACCDR-SIGVLLHGHAIVSG 138
           GF  +E P   +  F    R++  L P +F  +  L A      R  +   +H  A+  G
Sbjct: 15  GFLAHEDPAKVLSLFADKARQHGGLGPLDF--ACALRACRGNGRRWQVVPEIHAKAVTRG 72

Query: 139 YGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFG 198
            G    VG  L+DLY K   V  AR+VF+++  +D V W +M+SG  +N   ++++ ++ 
Sbjct: 73  LGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEALGLYR 132

Query: 199 DMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKC 258
            M R  G       +++VL +  + +    G  I   G K GF   ++V   +++ Y +C
Sbjct: 133 QMHR-AGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRC 191

Query: 259 GEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLI 318
           G    AE +F D+   D ++ N +ISG+   G  E +L +F ++  S    +  TI  L+
Sbjct: 192 GSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLL 251

Query: 319 PVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLA 378
                 G L     +HS+  K+GI S+  +  +L  +Y +  ++E A  +F+ S   ++ 
Sbjct: 252 AACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVV 311

Query: 379 SWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELV 438
            WN M+  + Q     ++  LF +MQA+ + PN  T   IL  C     I LG+ +H L 
Sbjct: 312 LWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLS 371

Query: 439 KSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEAL 498
               FES++YVS  LIDMY+K G + +AR + +++  K  V+W +MI+GY  H    +AL
Sbjct: 372 VKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDAL 431

Query: 499 QLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDI 558
             F EM   GI P  +   S +  C+    +R+G +I  + I+  G+      +  +V++
Sbjct: 432 AAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQI-HARIYVSGYSGDVSIWNALVNL 490

Query: 559 LGRAGQLEKALEFIKGLAVEPG 580
             R G++ +A    + + ++ G
Sbjct: 491 YARCGRIREAFSSFEEMELKDG 512



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 112/399 (28%), Positives = 196/399 (49%), Gaps = 26/399 (6%)

Query: 231 EIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNG 290
           EI    +  G   +  V   L+  YSK G V  A  +F ++   D +S  AM+SGY  NG
Sbjct: 63  EIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNG 122

Query: 291 KTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNC-----------IHSFCLK 339
             E +L L+RQ+  +          G++P  Y    + L++C           IH+   K
Sbjct: 123 LGEEALGLYRQMHRA----------GVVPTPYVLSSV-LSSCTKAELFAQGRLIHAQGYK 171

Query: 340 SGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISL 399
            G  S   V  A+ T+Y R      A ++F +   +   ++N +I+G+ Q G  E A+ +
Sbjct: 172 HGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEI 231

Query: 400 FQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAK 459
           F+EMQ S ++P+ VT+SS+L+ACA LG +  G  +H  +      S+  +  +L+D+Y K
Sbjct: 232 FEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVK 291

Query: 460 CGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSV 519
           CG++  A  +F+     + V WN M+  +G      ++ +LF +M  +GIRP+  T+  +
Sbjct: 292 CGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCI 351

Query: 520 LYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEP 579
           L  C+    +  G++I  S+    GF+        ++D+  + G LEKA   ++ L  E 
Sbjct: 352 LRTCTCTREIDLGEQI-HSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLK-EK 409

Query: 580 GPAVWGALLGACMIHKDTNLARVASEKLFELD--PENVG 616
               W +++   + H+    A  A +++ +    P+N+G
Sbjct: 410 DVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIG 448



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 52/179 (29%), Positives = 86/179 (48%), Gaps = 14/179 (7%)

Query: 373 SEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGK 432
           + +  AS    +AG+  +    + +SLF +         P+  +  L AC   G     +
Sbjct: 2   TRRGAASLGRTLAGFLAHEDPAKVLSLFADKARQHGGLGPLDFACALRACRGNGR----R 57

Query: 433 W-----VHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISG 487
           W     +H    +R       V   LID+Y+K G ++ AR +F+ +S +  V+W  M+SG
Sbjct: 58  WQVVPEIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSG 117

Query: 488 YGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFK 546
           Y  +G G EAL L+ +M  +G+ P+     SVL +C+ A L  +G      +IH  G+K
Sbjct: 118 YAQNGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQG-----RLIHAQGYK 171


>gi|195611854|gb|ACG27757.1| pentatricopeptide repeat protein PPR868-14 [Zea mays]
          Length = 633

 Score =  413 bits (1062), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 231/627 (36%), Positives = 333/627 (53%), Gaps = 57/627 (9%)

Query: 204 GGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVER 263
           GG  L +   AA+L   A         EI    ++        V   L   Y+  G ++ 
Sbjct: 18  GGGALTADRAAALLAGCASASR---AAEIHAAAVRASVDQDKAVAFRLQRAYAASGRLDL 74

Query: 264 AELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYP 323
           A  L R    P  +   + I  ++  G   ++L L  ++L S          GL+P  + 
Sbjct: 75  AVALLRRTPDPTAVFYTSAIHAHSSRGLHRAALALLSEMLLSRH--------GLLPTAHT 126

Query: 324 F-------GHLHLTNCIHSFCLKSGIVSNSSV---------------------------- 348
                   G L +   +H + +K  +     V                            
Sbjct: 127 LSASLPACGCLAVGRALHGYAVKLALSGEPYVATALLGMYARAGEAAAARALFDGMRPDP 186

Query: 349 ----LTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQ 404
               +TA+ + Y+++ +++ AR LFD    K L  WNAM+ GYTQ+G   EA+ LF++M 
Sbjct: 187 HVVSVTAMLSCYAKMGQLDDARGLFDALPRKDLVCWNAMMDGYTQHGRPSEALRLFRQML 246

Query: 405 ASKVAPNPVTVSSILSACAQLGAISLGKWVHELV----KSRNFESNIYVSTALIDMYAKC 460
            S V P+ V+V   LSA AQLG    G+W+H  V    +      N  V TAL+DMY KC
Sbjct: 247 RSGVEPDEVSVVLALSAVAQLGTAESGRWLHSFVANGGRRARVRLNARVGTALVDMYYKC 306

Query: 461 GNIVEARELF-DLMS--HKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFL 517
           G++ EA  +F DL     +  V WN MI+GY +HG   EAL+ F ++   G+ P+ +TF+
Sbjct: 307 GSLEEAVAVFRDLGGGGDRDVVAWNAMINGYAMHGRSREALEAFGQLRAQGLWPTDITFI 366

Query: 518 SVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAV 577
            VL ACSH+GLV EG  +F +M  ++G  P  EHY CMVD+LGRAG++E+A + ++ +  
Sbjct: 367 GVLNACSHSGLVDEGRALFAAMEEEYGIVPKVEHYGCMVDLLGRAGRVEEAFDLVQSMKA 426

Query: 578 EPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATV 637
           +P  A+W +LLGAC +HK+  L +  ++ L      N G +VLLSN+Y+A   + +   V
Sbjct: 427 KPDAAMWASLLGACRLHKNLALGQRVADYLVGNGLANSGTYVLLSNMYAAAGKWREVGRV 486

Query: 638 RQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTET 697
           R +++   + K PGC+ +EVG     F +GD+ HP+S  IYA LE++N   R  G    T
Sbjct: 487 RSMMRASGVQKEPGCSAVEVGRRVVEFVAGDRSHPRSAEIYAKLEEVNSIARARGHVPHT 546

Query: 698 VTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKV 757
              LHD+++  KE  + VHSEKLA+AFGLI+T P T I+I+KNLR C DCH   K +S+ 
Sbjct: 547 ELVLHDLDDAAKERALAVHSEKLALAFGLISTPPRTGIKIVKNLRACADCHAVLKLVSEA 606

Query: 758 TGRVIVVRDANRFHHFKGGVCSCGDYW 784
           TGR IV RD NRFHHF  G CSCGDYW
Sbjct: 607 TGRKIVFRDRNRFHHFVDGSCSCGDYW 633



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 123/501 (24%), Positives = 200/501 (39%), Gaps = 80/501 (15%)

Query: 14  SLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLF 73
           +LL G  + S+  + HA  +      D +   +L    +       A AL    P P   
Sbjct: 29  ALLAGCASASRAAEIHAAAVRASVDQDKAVAFRLQRAYAASGRLDLAVALLRRTPDPTAV 88

Query: 74  LFNVIIRGFSNNEMPKSSICFYTH-LRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHG 132
            +   I   S+  + ++++   +  L     L P   T S  L A   C   ++G  LHG
Sbjct: 89  FYTSAIHAHSSRGLHRAALALLSEMLLSRHGLLPTAHTLSASLPA---CGCLAVGRALHG 145

Query: 133 HAIVSGYGSDLFVGAALVDLYF--------------------------------KFSWVK 160
           +A+      + +V  AL+ +Y                                 K   + 
Sbjct: 146 YAVKLALSGEPYVATALLGMYARAGEAAAARALFDGMRPDPHVVSVTAMLSCYAKMGQLD 205

Query: 161 SARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAV 220
            AR +FD +P KD V WN+M+ G  ++    +++ +F  M+R+ G   D  SV   L AV
Sbjct: 206 DARGLFDALPRKDLVCWNAMMDGYTQHGRPSEALRLFRQMLRS-GVEPDEVSVVLALSAV 264

Query: 221 AEVQELRLGMEIQCL----GLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDI---VR 273
           A++     G  +       G +     +  V T LV  Y KCG +E A  +FRD+     
Sbjct: 265 AQLGTAESGRWLHSFVANGGRRARVRLNARVGTALVDMYYKCGSLEEAVAVFRDLGGGGD 324

Query: 274 PDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCI 333
            D+++ NAMI+GY  +G++  +L  F QL A        T +G+           L  C 
Sbjct: 325 RDVVAWNAMINGYAMHGRSREALEAFGQLRAQGLWPTDITFIGV-----------LNACS 373

Query: 334 HSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLT 393
           HS  +  G     ++  A+   Y  + ++E                +  M+    + G  
Sbjct: 374 HSGLVDEG----RALFAAMEEEYGIVPKVE---------------HYGCMVDLLGRAGRV 414

Query: 394 EEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHE-LVKSRNFESNIYVSTA 452
           EEA  L Q M+A    P+    +S+L AC     ++LG+ V + LV +    S  YV   
Sbjct: 415 EEAFDLVQSMKAK---PDAAMWASLLGACRLHKNLALGQRVADYLVGNGLANSGTYV--L 469

Query: 453 LIDMYAKCGNIVEARELFDLM 473
           L +MYA  G   E   +  +M
Sbjct: 470 LSNMYAAAGKWREVGRVRSMM 490


>gi|413947530|gb|AFW80179.1| hypothetical protein ZEAMMB73_142662 [Zea mays]
          Length = 649

 Score =  413 bits (1061), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 234/679 (34%), Positives = 356/679 (52%), Gaps = 70/679 (10%)

Query: 106 PDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKV 165
           PD +T+  +L A +     +    +H H +  G G +  V  +LV  Y       +AR +
Sbjct: 41  PDAYTFPPLLKAVARGSSAAPVRAVHAHVVKFGMGRNAHVATSLVTAYAAGGDGAAARAL 100

Query: 166 FDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQE 225
             +      V+WN++ISG  +   F ++   F DM R G      T V+ +        +
Sbjct: 101 LSERERDTPVVWNALISGHNRCRRFGEACCSFVDMARAGAAPTPVTYVSVLSACGKGTGD 160

Query: 226 LRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISG 285
           + LGM++                          G V  + +L      PDL   NA++  
Sbjct: 161 VLLGMQVH-------------------------GRVVGSGVL------PDLRVENALVDM 189

Query: 286 YTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSN 345
           Y      ES+ +LF  +   +                                   +VS 
Sbjct: 190 YAECADMESAWKLFDGMQVRS-----------------------------------VVSW 214

Query: 346 SSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQA 405
           +S+L+ L+    RL  ++ AR LF    E+   SW AMI GY Q     EA+ +F+EMQ 
Sbjct: 215 TSLLSGLT----RLGRVDEARDLFGRMPERDTVSWTAMIDGYVQAARFREALEMFREMQC 270

Query: 406 SKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVE 465
           S V+ +  T+ S+++ACAQLGA+ +G+WV   +  +  + + +V  ALIDMY+KCG+I  
Sbjct: 271 SNVSADEFTMVSVITACAQLGALEMGEWVRVYMSRQGIKMDAFVGNALIDMYSKCGSIER 330

Query: 466 ARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSH 525
           A ++F  M H+ + TW  +I G  ++G+G EA+++F  M+     P  VTF+ VL AC+H
Sbjct: 331 ALDVFKDMHHRDKFTWTAIILGLAVNGYGEEAIEMFHRMIGVSETPDEVTFIGVLTACTH 390

Query: 526 AGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWG 585
           AGLV +G E F SM   +   P   HY C++D+ GRAG++ +AL+ I  + + P   +WG
Sbjct: 391 AGLVDKGREFFLSMRETYNIAPNVVHYGCIIDLFGRAGKITEALDAIDQMPMTPNSTIWG 450

Query: 586 ALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRK 645
            LL AC +H ++ +  + +E+L ++DPEN   + LLSNIY+    +     +R  + ++ 
Sbjct: 451 TLLAACRVHGNSEIGELVTERLLQMDPENSTVYTLLSNIYAKCNRWEDVRRLRHTIMEKG 510

Query: 646 LAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVE 705
           + K PGC+LIE+ G  H F +GDQ HP S  IY  LE +   +   G+  +      +V 
Sbjct: 511 IKKEPGCSLIEMNGIIHEFVAGDQSHPMSKEIYCKLESIINDLNNVGYFPDVTEVFVEVA 570

Query: 706 EEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVR 765
           EEEK+ ++  HSEKLAIAF L+++EP T IRI+KNLR+CLDCH A K IS++ GR +VVR
Sbjct: 571 EEEKQKVLFWHSEKLAIAFALLSSEPNTVIRIVKNLRMCLDCHNAIKLISRLYGREVVVR 630

Query: 766 DANRFHHFKGGVCSCGDYW 784
           D  RFHHF+ G CSC DYW
Sbjct: 631 DRTRFHHFRHGFCSCKDYW 649



 Score =  119 bits (297), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 117/492 (23%), Positives = 204/492 (41%), Gaps = 69/492 (14%)

Query: 12  FLSLLKG---AKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIP 68
           F  LLK      + + +   HA ++  G   +    T L    +       ARAL     
Sbjct: 46  FPPLLKAVARGSSAAPVRAVHAHVVKFGMGRNAHVATSLVTAYAAGGDGAAARALLSERE 105

Query: 69  KPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSA-ASACCDRSIG 127
           +    ++N +I G +       + C +  + +  A  P   TY  VLSA      D  +G
Sbjct: 106 RDTPVVWNALISGHNRCRRFGEACCSFVDMARAGA-APTPVTYVSVLSACGKGTGDVLLG 164

Query: 128 VLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKN 187
           + +HG  + SG   DL V  ALVD+Y + + ++SA K+FD M  +  V W S++SGL + 
Sbjct: 165 MQVHGRVVGSGVLPDLRVENALVDMYAECADMESAWKLFDGMQVRSVVSWTSLLSGLTRL 224

Query: 188 CCFQDSIWVFGDMV-RNGGTWL-----------------------------DSTSVAAVL 217
               ++  +FG M  R+  +W                              D  ++ +V+
Sbjct: 225 GRVDEARDLFGRMPERDTVSWTAMIDGYVQAARFREALEMFREMQCSNVSADEFTMVSVI 284

Query: 218 PAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLI 277
            A A++  L +G  ++    + G     +V   L+  YSKCG +ERA  +F+D+   D  
Sbjct: 285 TACAQLGALEMGEWVRVYMSRQGIKMDAFVGNALIDMYSKCGSIERALDVFKDMHHRDKF 344

Query: 278 SCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFC 337
           +  A+I G   NG  E ++ +F +++  +E  +  T +G+           LT C H+  
Sbjct: 345 TWTAIILGLAVNGYGEEAIEMFHRMIGVSETPDEVTFIGV-----------LTACTHAGL 393

Query: 338 LKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAI 397
           +  G         ++   Y               +   ++  +  +I  + + G   EA+
Sbjct: 394 VDKG----REFFLSMRETY---------------NIAPNVVHYGCIIDLFGRAGKITEAL 434

Query: 398 SLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMY 457
               +M    + PN     ++L+AC   G   +G+ V E +   + E N  V T L ++Y
Sbjct: 435 DAIDQM---PMTPNSTIWGTLLAACRVHGNSEIGELVTERLLQMDPE-NSTVYTLLSNIY 490

Query: 458 AKCGNIVEAREL 469
           AKC    + R L
Sbjct: 491 AKCNRWEDVRRL 502



 Score =  117 bits (292), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 89/315 (28%), Positives = 140/315 (44%), Gaps = 33/315 (10%)

Query: 293 ESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTAL 352
           E ++  + ++LA     ++ T   L+              +H+  +K G+  N+ V T+L
Sbjct: 25  EDAVAGYARMLARGAMPDAYTFPPLLKAVARGSSAAPVRAVHAHVVKFGMGRNAHVATSL 84

Query: 353 STVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNP 412
            T Y+   +  AAR L  E    +   WNA+I+G+ +     EA   F +M  +  AP P
Sbjct: 85  VTAYAAGGDGAAARALLSERERDTPVVWNALISGHNRCRRFGEACCSFVDMARAGAAPTP 144

Query: 413 VTVSSILSACAQ-LGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKC----------- 460
           VT  S+LSAC +  G + LG  VH  V       ++ V  AL+DMYA+C           
Sbjct: 145 VTYVSVLSACGKGTGDVLLGMQVHGRVVGSGVLPDLRVENALVDMYAECADMESAWKLFD 204

Query: 461 --------------------GNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQL 500
                               G + EAR+LF  M  +  V+W  MI GY       EAL++
Sbjct: 205 GMQVRSVVSWTSLLSGLTRLGRVDEARDLFGRMPERDTVSWTAMIDGYVQAARFREALEM 264

Query: 501 FSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILG 560
           F EM  S +     T +SV+ AC+  G +  G E  +  +   G K  A     ++D+  
Sbjct: 265 FREMQCSNVSADEFTMVSVITACAQLGALEMG-EWVRVYMSRQGIKMDAFVGNALIDMYS 323

Query: 561 RAGQLEKALEFIKGL 575
           + G +E+AL+  K +
Sbjct: 324 KCGSIERALDVFKDM 338



 Score = 66.2 bits (160), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 69/256 (26%), Positives = 108/256 (42%), Gaps = 24/256 (9%)

Query: 394 EEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTAL 453
           E+A++ +  M A    P+  T   +L A A+  + +  + VH  V       N +V+T+L
Sbjct: 25  EDAVAGYARMLARGAMPDAYTFPPLLKAVARGSSAAPVRAVHAHVVKFGMGRNAHVATSL 84

Query: 454 IDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSG 513
           +  YA  G+   AR L       + V WN +ISG+       EA   F +M  +G  P+ 
Sbjct: 85  VTAYAAGGDGAAARALLSERERDTPVVWNALISGHNRCRRFGEACCSFVDMARAGAAPTP 144

Query: 514 VTFLSVLYACSHAGLVREGDEIFQSMIHDH----GFKPLAEHYACMVDILGRAGQLEKAL 569
           VT++SVL AC        GD +    +H      G  P       +VD+      +E A 
Sbjct: 145 VTYVSVLSACGKG----TGDVLLGMQVHGRVVGSGVLPDLRVENALVDMYAECADMESAW 200

Query: 570 EFIKGLAVEPGPAVWGALLGACMIHKDTNLARV-ASEKLFELDPE--NVGYHVLLSNIYS 626
           +   G+ V      W +LL        T L RV  +  LF   PE   V +  ++     
Sbjct: 201 KLFDGMQVR-SVVSWTSLLSGL-----TRLGRVDEARDLFGRMPERDTVSWTAMIDG--- 251

Query: 627 AERDYLQAATVRQVVK 642
               Y+QAA  R+ ++
Sbjct: 252 ----YVQAARFREALE 263


>gi|296085345|emb|CBI29077.3| unnamed protein product [Vitis vinifera]
          Length = 671

 Score =  413 bits (1061), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 215/553 (38%), Positives = 321/553 (58%), Gaps = 32/553 (5%)

Query: 264 AELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYP 323
           A+ +F  +  P     N++I   + +     +L L+  +L S  + +  T   +I     
Sbjct: 119 AKTIFHHLQNPPPSLYNSLIRALSSSKTPLEALPLYHTMLQSGLKPDHMTYPFVIKACNE 178

Query: 324 FGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAM 383
                    +H+  +KSG   +S ++++L  +Y+   ++ AA++LF+  S + + SWNAM
Sbjct: 179 SSVTWFGLLVHTHVVKSGFECDSYIVSSLIHLYANGKDLGAAKQLFNLCSARDVVSWNAM 238

Query: 384 IAGYTQN-------------------------------GLTEEAISLFQEMQASKVAPNP 412
           I GY ++                               G   EA++LF +M+A  V P  
Sbjct: 239 IDGYVKHVEMGHARMVFDRMVCRDVISWNTMINGYAICGKPNEALALFDQMRAVGVKPTE 298

Query: 413 VTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDL 472
            TV S+LSACA LGA+  G  +H  +     E N  V TAL+DMYAKCG I  A ++F+ 
Sbjct: 299 ATVVSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQVFNA 358

Query: 473 MSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREG 532
           M  K  + WNT+I+G  +HG+  EA QLF EM  +G+ P+ +TF+++L ACSHAG+V EG
Sbjct: 359 MESKDVLAWNTIIAGMAIHGNVKEAQQLFKEMKEAGVEPNDITFVAILSACSHAGMVDEG 418

Query: 533 DEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACM 592
            ++   M   +G +P  EHY C++D+L RAG LE+A+E I  + +EP P+  GALLG C 
Sbjct: 419 QKLLDCMSSSYGIEPKVEHYGCVIDLLARAGFLEEAMELIGTMPMEPNPSALGALLGGCR 478

Query: 593 IHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGC 652
           IH +  L  +  ++L  L P + G ++LLSNIY+A + +  A  VR ++K   ++K PG 
Sbjct: 479 IHGNFELGEMVGKRLINLQPCHSGRYILLSNIYAAAKKWDDARKVRNLMKVNGISKVPGV 538

Query: 653 TLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREA-GFQTETVTALHDVEEEEKEL 711
           ++IE+ G  H F +GD  HP+S  IY  L +++ +++ A G+  +T   L D+EEE+KE 
Sbjct: 539 SVIELKGMVHRFVAGDWSHPESNKIYEKLNEIHTRLKSAIGYSADTGNVLLDMEEEDKEH 598

Query: 712 MMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFH 771
            + VHSEKLAIA+GL+  +    IRI+KNLRVC DCH   K ISKV GR I+VRD NRFH
Sbjct: 599 ALAVHSEKLAIAYGLLHLDSKEAIRIVKNLRVCRDCHHVIKLISKVYGREIIVRDRNRFH 658

Query: 772 HFKGGVCSCGDYW 784
           HF+ G CSC D+W
Sbjct: 659 HFEDGECSCLDFW 671



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 131/506 (25%), Positives = 212/506 (41%), Gaps = 74/506 (14%)

Query: 3   MKTPQSRNLFLSLLKGAKTQSQLTQTHAQIIIH---GFQNDLSTVTKLAHRLSDFKATCY 59
           +  P S    LSL    KT   L Q HAQII H    FQ               F A  Y
Sbjct: 61  LTNPPSNPQILSLFNPCKTLRHLKQVHAQIITHHNSPFQLSALASLSALSPFPTFLA--Y 118

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           A+ +F  +  P   L+N +IR  S+++ P  ++  Y H    + L PD+ TY FV+ A +
Sbjct: 119 AKTIFHHLQNPPPSLYNSLIRALSSSKTPLEALPLY-HTMLQSGLKPDHMTYPFVIKACN 177

Query: 120 ACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNS 179
                  G+L+H H + SG+  D ++ ++L+ LY     + +A+++F+    +D V WN+
Sbjct: 178 ESSVTWFGLLVHTHVVKSGFECDSYIVSSLIHLYANGKDLGAAKQLFNLCSARDVVSWNA 237

Query: 180 MISGLMKNCCFQDSIWVFGDMV-RNGGTW-------------------LDSTSVAAVLPA 219
           MI G +K+     +  VF  MV R+  +W                    D      V P 
Sbjct: 238 MIDGYVKHVEMGHARMVFDRMVCRDVISWNTMINGYAICGKPNEALALFDQMRAVGVKPT 297

Query: 220 VAEVQELRLGMEIQCLGLKLGFHDHVY-----------VLTGLVSFYSKCGEVERAELLF 268
            A V  L L        L  G H H Y           V T LV  Y+KCG++  A  +F
Sbjct: 298 EATVVSL-LSACAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQVF 356

Query: 269 RDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLH 328
             +   D+++ N +I+G   +G  + + +LF+++  +    N  T V +           
Sbjct: 357 NAMESKDVLAWNTIIAGMAIHGNVKEAQQLFKEMKEAGVEPNDITFVAI----------- 405

Query: 329 LTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYT 388
           L+ C H+  +  G      +L  +S+ Y                 E  +  +  +I    
Sbjct: 406 LSACSHAGMVDEG----QKLLDCMSSSY---------------GIEPKVEHYGCVIDLLA 446

Query: 389 QNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWV-HELVKSRNFESNI 447
           + G  EEA+ L   M    + PNP  + ++L  C   G   LG+ V   L+  +   S  
Sbjct: 447 RAGFLEEAMELIGTM---PMEPNPSALGALLGGCRIHGNFELGEMVGKRLINLQPCHSGR 503

Query: 448 YVSTALIDMYAKCGNIVEARELFDLM 473
           Y+   L ++YA      +AR++ +LM
Sbjct: 504 YI--LLSNIYAAAKKWDDARKVRNLM 527



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 96/370 (25%), Positives = 172/370 (46%), Gaps = 34/370 (9%)

Query: 157 SWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAV 216
           +++  A+ +F  +      L+NS+I  L  +    +++ ++  M+++G    D  +   V
Sbjct: 114 TFLAYAKTIFHHLQNPPPSLYNSLIRALSSSKTPLEALPLYHTMLQSG-LKPDHMTYPFV 172

Query: 217 LPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLF-----RDI 271
           + A  E      G+ +    +K GF    Y+++ L+  Y+   ++  A+ LF     RD+
Sbjct: 173 IKACNESSVTWFGLLVHTHVVKSGFECDSYIVSSLIHLYANGKDLGAAKQLFNLCSARDV 232

Query: 272 VR--------------------------PDLISCNAMISGYTCNGKTESSLRLFRQLLAS 305
           V                            D+IS N MI+GY   GK   +L LF Q+ A 
Sbjct: 233 VSWNAMIDGYVKHVEMGHARMVFDRMVCRDVISWNTMINGYAICGKPNEALALFDQMRAV 292

Query: 306 AERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAA 365
             +   +T+V L+      G L     +H++   + I  NS V TAL  +Y++  ++  A
Sbjct: 293 GVKPTEATVVSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLA 352

Query: 366 RKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQL 425
            ++F+    K + +WN +IAG   +G  +EA  LF+EM+ + V PN +T  +ILSAC+  
Sbjct: 353 TQVFNAMESKDVLAWNTIIAGMAIHGNVKEAQQLFKEMKEAGVEPNDITFVAILSACSHA 412

Query: 426 GAISLG-KWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVT-WNT 483
           G +  G K +  +  S   E  +     +ID+ A+ G + EA EL   M  +   +    
Sbjct: 413 GMVDEGQKLLDCMSSSYGIEPKVEHYGCVIDLLARAGFLEEAMELIGTMPMEPNPSALGA 472

Query: 484 MISGYGLHGH 493
           ++ G  +HG+
Sbjct: 473 LLGGCRIHGN 482


>gi|414884091|tpg|DAA60105.1| TPA: hypothetical protein ZEAMMB73_697281 [Zea mays]
          Length = 734

 Score =  413 bits (1061), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 234/659 (35%), Positives = 355/659 (53%), Gaps = 35/659 (5%)

Query: 161 SARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRN-GGTWLDSTSVAAVLPA 219
           +A +VFD  P +    W S+ISG  +     D +  F +M+   G T  ++  +A VL  
Sbjct: 76  NAHRVFDGTPTRSLPAWTSIISGCAREGRHADGMRAFAEMLDECGATAPNAFVLAGVLRC 135

Query: 220 VAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLF-----RD---- 270
            A + ++  G  I    L+ G    V +   ++  Y+KCG+  RA   F     +D    
Sbjct: 136 CAGLGDVESGRRIHGWILRSGVCPDVVLCNAVLDMYAKCGDHGRARRAFGAMAQKDATSW 195

Query: 271 --IVRP--------------------DLISCNAMISGYTCNGKTESSLRLFRQLLASAER 308
             ++R                     D+ S N ++SG   +G T  +L   +Q++ +   
Sbjct: 196 NIVIRACLQDGDLVGATQLFDESSLRDVSSWNTIVSGLMRHGHTTEALGRLQQMVRAGVT 255

Query: 309 VNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKL 368
            ++ T   +  +        L   +H   + + +  ++ V  +L  +Y +  EME+A  +
Sbjct: 256 FSNYTYSMVFALAGLLSSRDLGRQLHGRVVVAVLEEDAFVGCSLMDMYCKCGEMESALSI 315

Query: 369 FDESS---EKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQL 425
           FD  S   E    +W+ M+AGY QNG  EEA+  F+ M    V      ++S+ SACA  
Sbjct: 316 FDRWSDFTEDRQFAWSTMVAGYVQNGREEEALEFFRRMLREGVPAGQFILTSVASACANA 375

Query: 426 GAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMI 485
           G +  G+ VH  V+      +  +++A++DMY+K G++ +A  +F     K+   W TM+
Sbjct: 376 GMVEQGRQVHGFVEKLGHRFDAPLASAIVDMYSKSGSLEDACRIFRSAQTKNVALWTTML 435

Query: 486 SGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGF 545
             Y  HG G  AL++FS M    I P+ +T ++VL ACSH+GLV +G   F  M  ++G 
Sbjct: 436 CSYASHGQGRMALEIFSRMKAEKIMPNEITLVAVLSACSHSGLVSDGYHYFNLMQEEYGI 495

Query: 546 KPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASE 605
            P  EHY CMVD+ GRAG L+KA  FI+   +     VW  LL AC +HK    A++ASE
Sbjct: 496 VPNTEHYNCMVDLYGRAGLLDKAKNFIEENKISHEAVVWKTLLSACRLHKHIEYAQLASE 555

Query: 606 KLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFT 665
           KL +L+  + G +VL+SN+Y+    +L    +R  +K+R++ K PG + I +    H F 
Sbjct: 556 KLVQLEQYDAGSYVLMSNMYATNNKWLDTFKLRSSMKERRVRKQPGQSWIHLKNVVHRFV 615

Query: 666 SGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFG 725
           + D  HP+S  IYA LEKL  +++E G+ + T   +HD+EEE++E  +K HSEKLAIAFG
Sbjct: 616 ALDTSHPRSAEIYAYLEKLMERLKEMGYTSRTDLVVHDIEEEQRETSLKFHSEKLAIAFG 675

Query: 726 LIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           +I+T  GT +RI KNLRVC DCH A KFI++ T R IVVRD  RFHHFK G CSC D+W
Sbjct: 676 IISTPVGTALRIFKNLRVCEDCHEAIKFITRATDREIVVRDLYRFHHFKDGQCSCEDFW 734



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 120/484 (24%), Positives = 210/484 (43%), Gaps = 41/484 (8%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSI-CFYTHLRKNTALTPDNFTYSFVLSAA 118
           A  +F   P   L  +  II G +        +  F   L +  A  P+ F  + VL   
Sbjct: 77  AHRVFDGTPTRSLPAWTSIISGCAREGRHADGMRAFAEMLDECGATAPNAFVLAGVLRCC 136

Query: 119 SACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTV--- 175
           +   D   G  +HG  + SG   D+ +  A++D+Y K      AR+ F  M +KD     
Sbjct: 137 AGLGDVESGRRIHGWILRSGVCPDVVLCNAVLDMYAKCGDHGRARRAFGAMAQKDATSWN 196

Query: 176 ----------------------------LWNSMISGLMKNCCFQDSIWVFGDMVRNGGTW 207
                                        WN+++SGLM++    +++     MVR G T+
Sbjct: 197 IVIRACLQDGDLVGATQLFDESSLRDVSSWNTIVSGLMRHGHTTEALGRLQQMVRAGVTF 256

Query: 208 LDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELL 267
            + T  + V      +    LG ++    +     +  +V   L+  Y KCGE+E A  +
Sbjct: 257 SNYT-YSMVFALAGLLSSRDLGRQLHGRVVVAVLEEDAFVGCSLMDMYCKCGEMESALSI 315

Query: 268 F---RDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPF 324
           F    D       + + M++GY  NG+ E +L  FR++L          +  +       
Sbjct: 316 FDRWSDFTEDRQFAWSTMVAGYVQNGREEEALEFFRRMLREGVPAGQFILTSVASACANA 375

Query: 325 GHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMI 384
           G +     +H F  K G   ++ + +A+  +YS+   +E A ++F  +  K++A W  M+
Sbjct: 376 GMVEQGRQVHGFVEKLGHRFDAPLASAIVDMYSKSGSLEDACRIFRSAQTKNVALWTTML 435

Query: 385 AGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSR-NF 443
             Y  +G    A+ +F  M+A K+ PN +T+ ++LSAC+  G +S G     L++     
Sbjct: 436 CSYASHGQGRMALEIFSRMKAEKIMPNEITLVAVLSACSHSGLVSDGYHYFNLMQEEYGI 495

Query: 444 ESNIYVSTALIDMYAKCGNIVEARELFD--LMSHKSEVTWNTMISGYGLHGHGLEALQLF 501
             N      ++D+Y + G + +A+   +   +SH++ V W T++S   LH H +E  QL 
Sbjct: 496 VPNTEHYNCMVDLYGRAGLLDKAKNFIEENKISHEA-VVWKTLLSACRLHKH-IEYAQLA 553

Query: 502 SEML 505
           SE L
Sbjct: 554 SEKL 557



 Score =  105 bits (263), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 100/406 (24%), Positives = 180/406 (44%), Gaps = 47/406 (11%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           A  LF      D+  +N I+ G   +     ++     + +   +T  N+TYS V + A 
Sbjct: 211 ATQLFDESSLRDVSSWNTIVSGLMRHGHTTEALGRLQQMVR-AGVTFSNYTYSMVFALAG 269

Query: 120 ACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDK---MPEKDTVL 176
               R +G  LHG  +V+    D FVG +L+D+Y K   ++SA  +FD+     E     
Sbjct: 270 LLSSRDLGRQLHGRVVVAVLEEDAFVGCSLMDMYCKCGEMESALSIFDRWSDFTEDRQFA 329

Query: 177 WNSMISGLMKNCCFQDSIWVFGDMVRNG---GTWLDSTSVAAVLPAVAEVQELRLGMEIQ 233
           W++M++G ++N   ++++  F  M+R G   G ++  TSVA+       V++   G ++ 
Sbjct: 330 WSTMVAGYVQNGREEEALEFFRRMLREGVPAGQFI-LTSVASACANAGMVEQ---GRQVH 385

Query: 234 CLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTE 293
               KLG      + + +V  YSK G +E A  +FR     ++     M+  Y  +G+  
Sbjct: 386 GFVEKLGHRFDAPLASAIVDMYSKSGSLEDACRIFRSAQTKNVALWTTMLCSYASHGQGR 445

Query: 294 SSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALS 353
            +L +F ++ A     N  T+V ++                S C  SG+VS+        
Sbjct: 446 MALEIFSRMKAEKIMPNEITLVAVL----------------SACSHSGLVSDG------- 482

Query: 354 TVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPV 413
             Y   N M+    +   +       +N M+  Y + GL ++A +  +E   +K++   V
Sbjct: 483 --YHYFNLMQEEYGIVPNTEH-----YNCMVDLYGRAGLLDKAKNFIEE---NKISHEAV 532

Query: 414 TVSSILSACAQLGAISLGKWVHE-LVKSRNFESNIYVSTALIDMYA 458
              ++LSAC     I   +   E LV+   +++  YV   + +MYA
Sbjct: 533 VWKTLLSACRLHKHIEYAQLASEKLVQLEQYDAGSYV--LMSNMYA 576


>gi|356570919|ref|XP_003553630.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g06540-like [Glycine max]
          Length = 622

 Score =  413 bits (1061), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 196/436 (44%), Positives = 279/436 (63%), Gaps = 1/436 (0%)

Query: 350 TALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVA 409
           T +   Y R  + ++AR+LFD   E++L +W+ MI+GY +N   E+A+  F+ +QA  V 
Sbjct: 187 TCMIAGYHRCGDAKSARELFDRMPERNLVTWSTMISGYARNNCFEKAVETFEALQAEGVV 246

Query: 410 PNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEAREL 469
            N   +  ++S+CA LGA+++G+  HE V       N+ + TA++DMYA+CGN+ +A  +
Sbjct: 247 ANETVMVGVISSCAHLGALAMGEKAHEYVMRNKLSLNLILGTAVVDMYARCGNVEKAVMV 306

Query: 470 FDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLV 529
           F+ +  K  + W  +I+G  +HG+  +AL  FSEM   G  P  +TF +VL ACSHAG+V
Sbjct: 307 FEQLPEKDVLCWTALIAGLAMHGYAEKALWYFSEMAKKGFVPRDITFTAVLTACSHAGMV 366

Query: 530 REGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLG 589
             G EIF+SM  DHG +P  EHY CMVD+LGRAG+L KA +F+  + V+P   +W ALLG
Sbjct: 367 ERGLEIFESMKRDHGVEPRLEHYGCMVDLLGRAGKLRKAEKFVLKMPVKPNAPIWRALLG 426

Query: 590 ACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKA 649
           AC IHK+  +     + L E+ PE  G++VLLSNIY+    +     +RQ++K + + K 
Sbjct: 427 ACRIHKNVEVGERVGKILLEMQPEYSGHYVLLSNIYARANKWKDVTVMRQMMKDKGVRKP 486

Query: 650 PGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLN-GKMREAGFQTETVTALHDVEEEE 708
           PG +LIE+ G  H FT GD+ HP+   I  + E +   K++ AG+   T   + D++EEE
Sbjct: 487 PGYSLIEIDGKVHEFTIGDKTHPEIEKIERIWEDIILPKIKLAGYVGNTAETMFDIDEEE 546

Query: 709 KELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDAN 768
           KE  +  HSEKLAIA+G++     T IRI+KNLRVC DCHTATK ISKV    ++VRD N
Sbjct: 547 KEGALHRHSEKLAIAYGIMKIRAPTPIRIVKNLRVCEDCHTATKLISKVFEVELIVRDRN 606

Query: 769 RFHHFKGGVCSCGDYW 784
           RFHHFK G CSC DYW
Sbjct: 607 RFHHFKEGTCSCMDYW 622



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 123/508 (24%), Positives = 221/508 (43%), Gaps = 71/508 (13%)

Query: 3   MKTPQSRNLFLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATC--YA 60
           +KT + +N  L LL+       L   HA ++      D+   ++L     D       YA
Sbjct: 11  LKTLRLKNPKLVLLECCSNARDLKIIHAHMLRTHLFFDVFAASRLIAFCIDSTTNLLHYA 70

Query: 61  RALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASA 120
             +   I  P+LF++N +IRG S +E P++S  +Y    +   L PDN T+ F++ A + 
Sbjct: 71  IRVASQIQNPNLFIYNALIRGCSTSENPENSFHYYIKALR-FGLLPDNITHPFLVKACAQ 129

Query: 121 CCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFK-------------------FSWV-- 159
             +  +G+  HG AI  G+  D +V  +LV +Y                      SW   
Sbjct: 130 LENAPMGMQTHGQAIKHGFEQDFYVQNSLVHMYASVGDINAARSVFQRMCRFDVVSWTCM 189

Query: 160 ----------KSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLD 209
                     KSAR++FD+MPE++ V W++MISG  +N CF+ ++  F + ++  G   +
Sbjct: 190 IAGYHRCGDAKSARELFDRMPERNLVTWSTMISGYARNNCFEKAVETF-EALQAEGVVAN 248

Query: 210 STSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFR 269
            T +  V+ + A +  L +G +     ++     ++ + T +V  Y++CG VE+A ++F 
Sbjct: 249 ETVMVGVISSCAHLGALAMGEKAHEYVMRNKLSLNLILGTAVVDMYARCGNVEKAVMVFE 308

Query: 270 DIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHL 329
            +   D++   A+I+G   +G  E +L  F ++             G +P    F  + L
Sbjct: 309 QLPEKDVLCWTALIAGLAMHGYAEKALWYFSEMAKK----------GFVPRDITFTAV-L 357

Query: 330 TNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQ 389
           T C H+  ++ G                 L   E+ ++  D   E  L  +  M+    +
Sbjct: 358 TACSHAGMVERG-----------------LEIFESMKR--DHGVEPRLEHYGCMVDLLGR 398

Query: 390 NGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFE-SNIY 448
            G   +A     +M    V PN     ++L AC     + +G+ V +++     E S  Y
Sbjct: 399 AGKLRKAEKFVLKM---PVKPNAPIWRALLGACRIHKNVEVGERVGKILLEMQPEYSGHY 455

Query: 449 VSTALIDMYAKCGNIVEARELFDLMSHK 476
           V   L ++YA+     +   +  +M  K
Sbjct: 456 V--LLSNIYARANKWKDVTVMRQMMKDK 481



 Score =  115 bits (289), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 89/407 (21%), Positives = 176/407 (43%), Gaps = 37/407 (9%)

Query: 121 CCDRSIGV-LLHGHAIVSGYGSDLFVGAALVDLYFKFS--WVKSARKVFDKMPEKDTVLW 177
           CC  +  + ++H H + +    D+F  + L+      +   +  A +V  ++   +  ++
Sbjct: 26  CCSNARDLKIIHAHMLRTHLFFDVFAASRLIAFCIDSTTNLLHYAIRVASQIQNPNLFIY 85

Query: 178 NSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGL 237
           N++I G   +   ++S   +   +R  G   D+ +   ++ A A+++   +GM+     +
Sbjct: 86  NALIRGCSTSENPENSFHYYIKALR-FGLLPDNITHPFLVKACAQLENAPMGMQTHGQAI 144

Query: 238 KLGFHDHVYVLTGLVSFYS-------------------------------KCGEVERAEL 266
           K GF    YV   LV  Y+                               +CG+ + A  
Sbjct: 145 KHGFEQDFYVQNSLVHMYASVGDINAARSVFQRMCRFDVVSWTCMIAGYHRCGDAKSARE 204

Query: 267 LFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGH 326
           LF  +   +L++ + MISGY  N   E ++  F  L A     N + +VG+I      G 
Sbjct: 205 LFDRMPERNLVTWSTMISGYARNNCFEKAVETFEALQAEGVVANETVMVGVISSCAHLGA 264

Query: 327 LHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAG 386
           L +    H + +++ +  N  + TA+  +Y+R   +E A  +F++  EK +  W A+IAG
Sbjct: 265 LAMGEKAHEYVMRNKLSLNLILGTAVVDMYARCGNVEKAVMVFEQLPEKDVLCWTALIAG 324

Query: 387 YTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVK-SRNFES 445
              +G  E+A+  F EM      P  +T +++L+AC+  G +  G  + E +K     E 
Sbjct: 325 LAMHGYAEKALWYFSEMAKKGFVPRDITFTAVLTACSHAGMVERGLEIFESMKRDHGVEP 384

Query: 446 NIYVSTALIDMYAKCGNIVEARELFDLMSHKSEV-TWNTMISGYGLH 491
            +     ++D+  + G + +A +    M  K     W  ++    +H
Sbjct: 385 RLEHYGCMVDLLGRAGKLRKAEKFVLKMPVKPNAPIWRALLGACRIH 431



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 71/296 (23%), Positives = 123/296 (41%), Gaps = 37/296 (12%)

Query: 333 IHSFCLKSGI---VSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQ 389
           IH+  L++ +   V  +S L A   + S  N +  A ++  +    +L  +NA+I G + 
Sbjct: 36  IHAHMLRTHLFFDVFAASRLIAF-CIDSTTNLLHYAIRVASQIQNPNLFIYNALIRGCST 94

Query: 390 NGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYV 449
           +   E +   + +     + P+ +T   ++ ACAQL    +G   H       FE + YV
Sbjct: 95  SENPENSFHYYIKALRFGLLPDNITHPFLVKACAQLENAPMGMQTHGQAIKHGFEQDFYV 154

Query: 450 STALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLH--- 506
             +L+ MYA  G+I  AR +F  M     V+W  MI+GY   G    A +LF  M     
Sbjct: 155 QNSLVHMYASVGDINAARSVFQRMCRFDVVSWTCMIAGYHRCGDAKSARELFDRMPERNL 214

Query: 507 ----------------------------SGIRPSGVTFLSVLYACSHAGLVREGDEIFQS 538
                                        G+  +    + V+ +C+H G +  G++  + 
Sbjct: 215 VTWSTMISGYARNNCFEKAVETFEALQAEGVVANETVMVGVISSCAHLGALAMGEKAHEY 274

Query: 539 MIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIH 594
           ++ +     L    A +VD+  R G +EKA+   + L  E     W AL+    +H
Sbjct: 275 VMRNKLSLNLILGTA-VVDMYARCGNVEKAVMVFEQLP-EKDVLCWTALIAGLAMH 328


>gi|125575213|gb|EAZ16497.1| hypothetical protein OsJ_31969 [Oryza sativa Japonica Group]
          Length = 617

 Score =  413 bits (1061), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 223/620 (35%), Positives = 356/620 (57%), Gaps = 7/620 (1%)

Query: 169 MPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRL 228
           MP ++ V W +++SGL +N    D++  F  M R  G      ++++   A A +     
Sbjct: 1   MPRRNAVSWTTLVSGLSQNLMHADALAAFAAM-RRAGVAPTRFALSSAARAAAALGAPLP 59

Query: 229 GMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTC 288
           G ++ C+G++LGF   ++V + L   YSKCG +  A  +F  + + D ++  AMI GY  
Sbjct: 60  GAQLHCVGVRLGFDTELFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAK 119

Query: 289 NGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLH---LTNCIHSFCLKSGIVSN 345
           NG  E+++  FR +    E +  +       V    G L    L+  IH    K+G    
Sbjct: 120 NGSLEAAVLSFRDM--KREGLVGADQHVFCSVLSASGGLKDGWLSKSIHCCVTKAGFELE 177

Query: 346 SSVLTALSTVYSRLNEMEAARKLFD-ESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQ 404
            +V  AL  +Y++  ++E+A ++   +    ++ S  +MI GY +    EEA+ ++ E++
Sbjct: 178 VAVRNALIDMYAKSMDVESASRVLKIDPGGWNVVSGTSMIDGYIETDCVEEALVIYVELR 237

Query: 405 ASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIV 464
              V PN  T SS++  CA    +  G  +H  V   +   + +V + L+DMY KCG I 
Sbjct: 238 RQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGSTLVDMYGKCGLIS 297

Query: 465 EARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACS 524
            + +LF+ + +++++ WN +I+ +  HGHG EA+Q F  M++SGIRP+ + F+S+L ACS
Sbjct: 298 LSMQLFNEIEYRTDIAWNAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIAFVSLLTACS 357

Query: 525 HAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVW 584
           HAGLV EG + F SM   HG +P  EHY+C++D  GRAG+L++A +FI  + ++P    W
Sbjct: 358 HAGLVDEGLKYFYSMKEAHGIEPKEEHYSCIIDTYGRAGRLDEAYKFISEMPIKPNAYGW 417

Query: 585 GALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKR 644
            +LLGAC +     L  VA++ L +L+P N G HV LS IY++   +     VR++++  
Sbjct: 418 CSLLGACRMRGSKELGEVAAQNLMKLEPGNTGIHVSLSGIYASLGQWEDVKAVRKLMRDS 477

Query: 645 KLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDV 704
           ++ K PG + ++     HVF S D  HPQ   IY  LE+L  +++E G+  +T     ++
Sbjct: 478 RIKKLPGFSWVDSNKKTHVFGSEDWSHPQQKDIYEKLEELTTRIKEEGYIPDTSFLPCNL 537

Query: 705 EEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVV 764
           E+  KE +++ HSE++A+AF LI+      I + KNLR+C+DCHTA KFI KV  R I+V
Sbjct: 538 EDIAKERILRYHSERIAVAFALISMPATKPIIVKKNLRICIDCHTAFKFICKVERRDIIV 597

Query: 765 RDANRFHHFKGGVCSCGDYW 784
           RD +RFHHF  G CSCGDYW
Sbjct: 598 RDNSRFHHFVNGRCSCGDYW 617



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 115/429 (26%), Positives = 200/429 (46%), Gaps = 4/429 (0%)

Query: 67  IPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSI 126
           +P+ +   +  ++ G S N M   ++  +  +R+   + P  F  S    AA+A      
Sbjct: 1   MPRRNAVSWTTLVSGLSQNLMHADALAAFAAMRR-AGVAPTRFALSSAARAAAALGAPLP 59

Query: 127 GVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMK 186
           G  LH   +  G+ ++LFV + L D+Y K   +  A +VFD+MP+KD V W +MI G  K
Sbjct: 60  GAQLHCVGVRLGFDTELFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAK 119

Query: 187 NCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVY 246
           N   + ++  F DM R G    D     +VL A   +++  L   I C   K GF   V 
Sbjct: 120 NGSLEAAVLSFRDMKREGLVGADQHVFCSVLSASGGLKDGWLSKSIHCCVTKAGFELEVA 179

Query: 247 VLTGLVSFYSKCGEVERAELLFR-DIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLAS 305
           V   L+  Y+K  +VE A  + + D    +++S  +MI GY      E +L ++ +L   
Sbjct: 180 VRNALIDMYAKSMDVESASRVLKIDPGGWNVVSGTSMIDGYIETDCVEEALVIYVELRRQ 239

Query: 306 AERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAA 365
               N  T   +I        L     +H+  +K+ ++ +S V + L  +Y +   +  +
Sbjct: 240 GVEPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGSTLVDMYGKCGLISLS 299

Query: 366 RKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQL 425
            +LF+E   ++  +WNA+I  + Q+G   EAI  F  M  S + PN +   S+L+AC+  
Sbjct: 300 MQLFNEIEYRTDIAWNAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIAFVSLLTACSHA 359

Query: 426 GAISLG-KWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEV-TWNT 483
           G +  G K+ + + ++   E      + +ID Y + G + EA +    M  K     W +
Sbjct: 360 GLVDEGLKYFYSMKEAHGIEPKEEHYSCIIDTYGRAGRLDEAYKFISEMPIKPNAYGWCS 419

Query: 484 MISGYGLHG 492
           ++    + G
Sbjct: 420 LLGACRMRG 428



 Score = 99.8 bits (247), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 105/449 (23%), Positives = 192/449 (42%), Gaps = 38/449 (8%)

Query: 27  QTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNE 86
           Q H   +  GF  +L   + LA   S       A  +F  +P+ D   +  +I G++ N 
Sbjct: 62  QLHCVGVRLGFDTELFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKNG 121

Query: 87  MPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVG 146
             ++++  +  +++   +  D   +  VLSA+    D  +   +H     +G+  ++ V 
Sbjct: 122 SLEAAVLSFRDMKREGLVGADQHVFCSVLSASGGLKDGWLSKSIHCCVTKAGFELEVAVR 181

Query: 147 AALVDLYFKFSWVKSARKVFDKMPEK-DTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGG 205
            AL+D+Y K   V+SA +V    P   + V   SMI G ++  C ++++ ++ ++ R  G
Sbjct: 182 NALIDMYAKSMDVESASRVLKIDPGGWNVVSGTSMIDGYIETDCVEEALVIYVEL-RRQG 240

Query: 206 TWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAE 265
              +  + ++++   A    L  G ++    +K       +V + LV  Y KCG +  + 
Sbjct: 241 VEPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGSTLVDMYGKCGLISLSM 300

Query: 266 LLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFG 325
            LF +I     I+ NA+I+ +  +G    +++ F +++ S  R N    V L        
Sbjct: 301 QLFNEIEYRTDIAWNAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIAFVSL-------- 352

Query: 326 HLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIA 385
              LT C H+  +  G          L   YS    M+ A  +     E     ++ +I 
Sbjct: 353 ---LTACSHAGLVDEG----------LKYFYS----MKEAHGI-----EPKEEHYSCIID 390

Query: 386 GYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGK-WVHELVKSRNFE 444
            Y + G  +EA     EM    + PN     S+L AC   G+  LG+     L+K     
Sbjct: 391 TYGRAGRLDEAYKFISEM---PIKPNAYGWCSLLGACRMRGSKELGEVAAQNLMKLEPGN 447

Query: 445 SNIYVSTALIDMYAKCGNIVEARELFDLM 473
           + I+VS  L  +YA  G   + + +  LM
Sbjct: 448 TGIHVS--LSGIYASLGQWEDVKAVRKLM 474


>gi|297829922|ref|XP_002882843.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297328683|gb|EFH59102.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 627

 Score =  412 bits (1060), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 214/572 (37%), Positives = 335/572 (58%), Gaps = 2/572 (0%)

Query: 215 AVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRP 274
           A+L A  + + LR G  +    +K  +    Y+ T L+ FY KC  +E A  +  ++   
Sbjct: 56  ALLNACLDKRALREGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEK 115

Query: 275 DLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIH 334
           +++S  AMIS Y+  G +  +L +F +++ S  + N  T   ++        L L   IH
Sbjct: 116 NVVSWTAMISRYSQTGHSSEALSVFAEMMRSDGKPNEFTFATVLTSCIRASGLALGKQIH 175

Query: 335 SFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTE 394
              +K    S+  V ++L  +Y++  ++E AR++F+   E+ + S  A+IAGY Q GL E
Sbjct: 176 GLIVKWNYDSHIFVGSSLLDMYAKAGQIEEAREIFECLPERDVVSCTAIIAGYAQLGLDE 235

Query: 395 EAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALI 454
           EA+ +FQ +Q+  + PN VT +S+L+A + L  +  GK  H  V  R       +  +LI
Sbjct: 236 EALEMFQRLQSEGMRPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLI 295

Query: 455 DMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEML-HSGIRPSG 513
           DMY+KCGN+  A+ LFD M  ++ ++WN M+ GY  HG G E L+LF  M     ++P  
Sbjct: 296 DMYSKCGNLSYAQRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDA 355

Query: 514 VTFLSVLYACSHAGLVREGDEIFQSMIH-DHGFKPLAEHYACMVDILGRAGQLEKALEFI 572
           VT L+VL  CSH  +   G  I+  M+  ++G KP  EHY C+VD+LGRAG++++A EFI
Sbjct: 356 VTLLAVLSGCSHGKMEDTGLSIYDGMVAGEYGIKPDTEHYGCIVDMLGRAGRIDEAFEFI 415

Query: 573 KGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYL 632
           K +  +P   V G+LLGAC +H   ++      +L E++PEN G +V+LSN+Y++   + 
Sbjct: 416 KRMPSKPTAGVLGSLLGACRVHLSVDIGEYVGHRLIEIEPENAGNYVILSNLYASAGRWE 475

Query: 633 QAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAG 692
               VR ++ ++ + K PG + I+   T H F + D+ HP+   + A +++++ KM++AG
Sbjct: 476 DVNNVRAMMMQKAVTKEPGRSWIQHEQTLHYFHANDRTHPRREEVLAKMKEISIKMKQAG 535

Query: 693 FQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATK 752
           +  +    L+DV+EE+KE M+  HSEKLA+ FGLI T  G  IR+ KNLR+C+DCH   K
Sbjct: 536 YVPDISCVLYDVDEEQKEKMLLGHSEKLALTFGLITTGEGIPIRVFKNLRICVDCHNFAK 595

Query: 753 FISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
             SKV  R + +RD NRFH    G+CSCGDYW
Sbjct: 596 IFSKVFEREVSLRDKNRFHQIVKGICSCGDYW 627



 Score =  169 bits (428), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 106/364 (29%), Positives = 183/364 (50%), Gaps = 7/364 (1%)

Query: 119 SACCDRSI---GVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTV 175
           +AC D+     G  +H H I + Y    ++   L+  Y K   ++ ARKV D+MPEK+ V
Sbjct: 59  NACLDKRALREGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVV 118

Query: 176 LWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCL 235
            W +MIS   +     +++ VF +M+R+ G   +  + A VL +      L LG +I  L
Sbjct: 119 SWTAMISRYSQTGHSSEALSVFAEMMRSDGK-PNEFTFATVLTSCIRASGLALGKQIHGL 177

Query: 236 GLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESS 295
            +K  +  H++V + L+  Y+K G++E A  +F  +   D++SC A+I+GY   G  E +
Sbjct: 178 IVKWNYDSHIFVGSSLLDMYAKAGQIEEAREIFECLPERDVVSCTAIIAGYAQLGLDEEA 237

Query: 296 LRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTV 355
           L +F++L +   R N  T   L+        L      H   L+  +   + +  +L  +
Sbjct: 238 LEMFQRLQSEGMRPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDM 297

Query: 356 YSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASK-VAPNPVT 414
           YS+   +  A++LFD   E++  SWNAM+ GY+++GL  E + LF+ M+  K V P+ VT
Sbjct: 298 YSKCGNLSYAQRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVT 357

Query: 415 VSSILSACAQLGAISLGKWVHE--LVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDL 472
           + ++LS C+       G  +++  +      + +      ++DM  + G I EA E    
Sbjct: 358 LLAVLSGCSHGKMEDTGLSIYDGMVAGEYGIKPDTEHYGCIVDMLGRAGRIDEAFEFIKR 417

Query: 473 MSHK 476
           M  K
Sbjct: 418 MPSK 421



 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 102/448 (22%), Positives = 202/448 (45%), Gaps = 40/448 (8%)

Query: 35  HGFQNDLSTVTKLAHRLSDFKATCY----ARALFFSIPKPDLFLFNVIIRGFSNNEMPKS 90
           H  +      T L  RL  F   C     AR +   +P+ ++  +  +I  +S       
Sbjct: 76  HMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSE 135

Query: 91  SICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALV 150
           ++  +  + ++    P+ FT++ VL++       ++G  +HG  +   Y S +FVG++L+
Sbjct: 136 ALSVFAEMMRSDG-KPNEFTFATVLTSCIRASGLALGKQIHGLIVKWNYDSHIFVGSSLL 194

Query: 151 DLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDS 210
           D+Y K   ++ AR++F+ +PE+D V   ++I+G  +    ++++ +F   +++ G   + 
Sbjct: 195 DMYAKAGQIEEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMF-QRLQSEGMRPNY 253

Query: 211 TSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRD 270
            + A++L A++ +  L  G +  C  L+     +  +   L+  YSKCG +  A+ LF +
Sbjct: 254 VTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYAQRLFDN 313

Query: 271 IVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLT 330
           +     IS NAM+ GY+ +G     L LFR L+   +RV    +  L+ V        L+
Sbjct: 314 MPERTAISWNAMLVGYSKHGLGREVLELFR-LMRDEKRVKPDAVT-LLAV--------LS 363

Query: 331 NCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQN 390
            C H     +G+           ++Y  +   E   K   E        +  ++    + 
Sbjct: 364 GCSHGKMEDTGL-----------SIYDGMVAGEYGIKPDTE-------HYGCIVDMLGRA 405

Query: 391 GLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWV-HELVKSRNFESNIYV 449
           G  +EA    + M +    P    + S+L AC    ++ +G++V H L++     +  YV
Sbjct: 406 GRIDEAFEFIKRMPSK---PTAGVLGSLLGACRVHLSVDIGEYVGHRLIEIEPENAGNYV 462

Query: 450 STALIDMYAKCGNIVEARELFDLMSHKS 477
              L ++YA  G   +   +  +M  K+
Sbjct: 463 --ILSNLYASAGRWEDVNNVRAMMMQKA 488


>gi|297810761|ref|XP_002873264.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297319101|gb|EFH49523.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 624

 Score =  412 bits (1060), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 215/550 (39%), Positives = 323/550 (58%), Gaps = 32/550 (5%)

Query: 267 LFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGH 326
           +F  I  P+L   N +I  ++   +   +   + Q+L S    ++ T   LI        
Sbjct: 75  IFSQIQNPNLFVFNVLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASTEMEC 134

Query: 327 LHLTNCIHSFCLKSGI-----VSNSSV--------------------------LTALSTV 355
           + +    HS  ++ G      V NS V                           T++   
Sbjct: 135 VVVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGLIAAAGRIFGQMPFRDVVSWTSMVAG 194

Query: 356 YSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTV 415
           Y +   +E AR++FDE   ++L +W+ MI GY +N   E+AI LF+ M+   V  N   +
Sbjct: 195 YCKCGMVEDAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFELMKREGVVANETVM 254

Query: 416 SSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSH 475
            S++S+CA LGA+  G+  HE V   +   N+ + TAL+DMY +CG I +A  +F+ +  
Sbjct: 255 VSVISSCAHLGALEFGERAHEYVVKSHMTVNLILGTALVDMYWRCGEIEKAIRVFEELPD 314

Query: 476 KSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEI 535
           K  ++W+++I G  +HGH  +A+  FS+M+  G  P  +T  +VL ACSH GLV +G EI
Sbjct: 315 KDSLSWSSIIKGLAVHGHAHKAIHYFSQMVRLGFSPRDITLTAVLSACSHGGLVDKGLEI 374

Query: 536 FQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHK 595
           +++M  D+G +P  EHY C+VD+LGRAG+L +A  FI  + V+P   + GALLGAC I+K
Sbjct: 375 YENMKRDYGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMPVKPNAPILGALLGACKIYK 434

Query: 596 DTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLI 655
           +T +A      L E+ PE+ GY+VLLSNIY+    + +  ++R ++K++ + K PG +LI
Sbjct: 435 NTEVAERVGNMLIEVKPEHSGYYVLLSNIYACAGQWEKLESLRDIMKEKLVKKPPGWSLI 494

Query: 656 EVGGTPHVFTSG-DQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMK 714
           E+ G  + F+ G DQ HP+   I  + E++ GK+R  G++  T  A  DV+EEEKE  + 
Sbjct: 495 EIDGKINKFSMGDDQKHPEMGKIKRLWEEILGKIRLIGYKGNTGDAFFDVDEEEKETAIH 554

Query: 715 VHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFK 774
           +HSEKLAIA+G++ T+ GT IRI+KNLRVC DCHTATK IS+V GR  +VRD NRFHHF+
Sbjct: 555 MHSEKLAIAYGMMKTKTGTTIRIVKNLRVCEDCHTATKLISEVYGREFIVRDRNRFHHFR 614

Query: 775 GGVCSCGDYW 784
            G+CSC DYW
Sbjct: 615 NGLCSCRDYW 624



 Score =  125 bits (315), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 106/450 (23%), Positives = 192/450 (42%), Gaps = 69/450 (15%)

Query: 59  YARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAA 118
           YA  +F  I  P+LF+FNV+IR FS    P  +  FYT + K + + PDN T+ F++ A+
Sbjct: 71  YAYGIFSQIQNPNLFVFNVLIRCFSTGAEPSKAFGFYTQMLK-SRIWPDNITFPFLIKAS 129

Query: 119 SACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWN 178
           +      +G   H   +  G+ +D++V  +LV +Y     + +A ++F +MP +D V W 
Sbjct: 130 TEMECVVVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGLIAAAGRIFGQMPFRDVVSWT 189

Query: 179 S-------------------------------MISGLMKNCCFQDSIWVFGDMVRNGGTW 207
           S                               MI+G  KN CF+ +I +F ++++  G  
Sbjct: 190 SMVAGYCKCGMVEDAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLF-ELMKREGVV 248

Query: 208 LDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELL 267
            + T + +V+ + A +  L  G       +K     ++ + T LV  Y +CGE+E+A  +
Sbjct: 249 ANETVMVSVISSCAHLGALEFGERAHEYVVKSHMTVNLILGTALVDMYWRCGEIEKAIRV 308

Query: 268 FRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHL 327
           F ++   D +S +++I G   +G    ++  F Q++         T+  +          
Sbjct: 309 FEELPDKDSLSWSSIIKGLAVHGHAHKAIHYFSQMVRLGFSPRDITLTAV---------- 358

Query: 328 HLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGY 387
            L+ C H   +  G+            +Y  +          D   E  L  +  ++   
Sbjct: 359 -LSACSHGGLVDKGL-----------EIYENMKR--------DYGIEPRLEHYGCIVDML 398

Query: 388 TQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWV-HELVKSRNFESN 446
            + G   EA +   +M    V PN   + ++L AC       + + V + L++ +   S 
Sbjct: 399 GRAGKLAEAENFILKM---PVKPNAPILGALLGACKIYKNTEVAERVGNMLIEVKPEHSG 455

Query: 447 IYVSTALIDMYAKCGNIVEARELFDLMSHK 476
            YV   L ++YA  G   +   L D+M  K
Sbjct: 456 YYV--LLSNIYACAGQWEKLESLRDIMKEK 483



 Score =  112 bits (280), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 103/457 (22%), Positives = 191/457 (41%), Gaps = 52/457 (11%)

Query: 115 LSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDL---------YFKFSWVKSARKV 165
           L+   +C   S   ++HG  + +   SD+FV + L+ L         +   + +  A  +
Sbjct: 16  LALLQSCSSFSDLKIIHGFLLRTHLISDVFVASRLLALALCVDDSTFHKPTNLLGYAYGI 75

Query: 166 FDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQE 225
           F ++   +  ++N +I           +   +  M+++   W D+ +   ++ A  E++ 
Sbjct: 76  FSQIQNPNLFVFNVLIRCFSTGAEPSKAFGFYTQMLKSR-IWPDNITFPFLIKASTEMEC 134

Query: 226 LRLGMEIQCLGLKLGFHDHVYV-------------------------------LTGLVSF 254
           + +G +     ++ GF + VYV                                T +V+ 
Sbjct: 135 VVVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGLIAAAGRIFGQMPFRDVVSWTSMVAG 194

Query: 255 YSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTI 314
           Y KCG VE A  +F ++   +L + + MI+GY  N   E ++ LF  +       N + +
Sbjct: 195 YCKCGMVEDAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFELMKREGVVANETVM 254

Query: 315 VGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSE 374
           V +I      G L      H + +KS +  N  + TAL  +Y R  E+E A ++F+E  +
Sbjct: 255 VSVISSCAHLGALEFGERAHEYVVKSHMTVNLILGTALVDMYWRCGEIEKAIRVFEELPD 314

Query: 375 KSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWV 434
           K   SW+++I G   +G   +AI  F +M     +P  +T++++LSAC+  G +  G  +
Sbjct: 315 KDSLSWSSIIKGLAVHGHAHKAIHYFSQMVRLGFSPRDITLTAVLSACSHGGLVDKGLEI 374

Query: 435 HE-LVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGH 493
           +E + +    E  +     ++DM  + G + EA      M  K        + G      
Sbjct: 375 YENMKRDYGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMPVKPNAPILGALLGACKIYK 434

Query: 494 GLEALQLFSEML------HSGIRPSGVTFLSVLYACS 524
             E  +    ML      HSG        LS +YAC+
Sbjct: 435 NTEVAERVGNMLIEVKPEHSGY----YVLLSNIYACA 467



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 78/331 (23%), Positives = 148/331 (44%), Gaps = 39/331 (11%)

Query: 10  NLFLSLLKGAKTQSQLT----QTHAQIIIHGFQNDLSTVTKLAHRLSD------------ 53
           N+    L  A T+ +      QTH+QI+  GFQND+     L H  ++            
Sbjct: 119 NITFPFLIKASTEMECVVVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGLIAAAGRIFG 178

Query: 54  ---FKATCY----------------ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICF 94
              F+                    AR +F  +P  +LF ++++I G++ N   + +I  
Sbjct: 179 QMPFRDVVSWTSMVAGYCKCGMVEDAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDL 238

Query: 95  YTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYF 154
           +  +++   +  +    S V+S+ +       G   H + + S    +L +G ALVD+Y+
Sbjct: 239 FELMKREGVVANETVMVS-VISSCAHLGALEFGERAHEYVVKSHMTVNLILGTALVDMYW 297

Query: 155 KFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVA 214
           +   ++ A +VF+++P+KD++ W+S+I GL  +     +I  F  MVR G +  D T + 
Sbjct: 298 RCGEIEKAIRVFEELPDKDSLSWSSIIKGLAVHGHAHKAIHYFSQMVRLGFSPRDIT-LT 356

Query: 215 AVLPAVAEVQELRLGMEI-QCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAE-LLFRDIV 272
           AVL A +    +  G+EI + +    G    +     +V    + G++  AE  + +  V
Sbjct: 357 AVLSACSHGGLVDKGLEIYENMKRDYGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMPV 416

Query: 273 RPDLISCNAMISGYTCNGKTESSLRLFRQLL 303
           +P+     A++        TE + R+   L+
Sbjct: 417 KPNAPILGALLGACKIYKNTEVAERVGNMLI 447


>gi|242041629|ref|XP_002468209.1| hypothetical protein SORBIDRAFT_01g041740 [Sorghum bicolor]
 gi|241922063|gb|EER95207.1| hypothetical protein SORBIDRAFT_01g041740 [Sorghum bicolor]
          Length = 635

 Score =  412 bits (1060), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 214/525 (40%), Positives = 318/525 (60%), Gaps = 5/525 (0%)

Query: 264 AELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLL---ASAERVNSSTIVGLIPV 320
           A  LF  + R D  S +A++S +  +G+  ++L ++R++L    SA   N  T    +  
Sbjct: 112 ARALFDRMPRRDHFSWSAIVSAHARHGQPRAALAIYRRMLREPGSAGVDNEFTASSALAA 171

Query: 321 FYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASW 380
                       +H   ++ GI +++ V +AL+ +Y++   ++ AR +FD    + + SW
Sbjct: 172 ATAARCARAGRELHCHVVRRGIDADAVVWSALADMYAKCGRVDDARSVFDRMPVRDVVSW 231

Query: 381 NAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVH-ELVK 439
            AM+  Y       E   LF  M  S + PN  T + +L ACA+  +  LGK VH  + K
Sbjct: 232 TAMVERYFDARRDGEGFRLFVRMLRSGIQPNEFTYAGVLRACAEFTSEKLGKQVHGRMTK 291

Query: 440 SRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQ 499
           SR  +S  +  +AL+ MY+K G++  A  +F  M     V+W  MISGY  +G   EAL+
Sbjct: 292 SRAGDS-CFAESALVHMYSKYGDMGTAVRVFRGMPKLDLVSWTAMISGYAQNGQPDEALR 350

Query: 500 LFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDIL 559
            F  +L SG RP  VTF+ VL AC+HAGLV +G  IF S+  ++G +  A+HYAC++D+L
Sbjct: 351 YFDMLLRSGCRPDHVTFVGVLSACAHAGLVDKGLSIFHSIKDEYGIEHTADHYACVIDLL 410

Query: 560 GRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHV 619
            R+G  E+A E I  ++V+P   +W +LLG C IHK+  LAR A+E LFE++PEN   +V
Sbjct: 411 SRSGLFERAEEMINTMSVKPNKFLWASLLGGCRIHKNVRLARWAAEALFEIEPENPATYV 470

Query: 620 LLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYA 679
            L+NIY++   + +    R++++ + + K P  + IEVG   HVF  GD+LHPQ+  +YA
Sbjct: 471 TLANIYASVGLFDEVENTRRIMELKGITKMPASSWIEVGTRMHVFLVGDKLHPQAEQVYA 530

Query: 680 MLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIK 739
           +L+KL  KMRE G+  +T   LHDVE+E+K+  +  HSE+LA+AFG+IAT  G  I++ K
Sbjct: 531 LLKKLYVKMREEGYVADTGFVLHDVEDEQKQQDIGYHSERLAVAFGIIATPKGAPIKVFK 590

Query: 740 NLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           NLR+C DCHT  K ISK+  R I+VRD+NRFHHFK G CSC DYW
Sbjct: 591 NLRICGDCHTTIKLISKIVQREIIVRDSNRFHHFKNGSCSCRDYW 635



 Score =  139 bits (351), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 121/416 (29%), Positives = 187/416 (44%), Gaps = 44/416 (10%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTH-LRKNTALTPDN-FTYSFVLSA 117
           ARALF  +P+ D F ++ I+   + +  P++++  Y   LR+  +   DN FT S  L+A
Sbjct: 112 ARALFDRMPRRDHFSWSAIVSAHARHGQPRAALAIYRRMLREPGSAGVDNEFTASSALAA 171

Query: 118 ASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLW 177
           A+A      G  LH H +  G  +D  V +AL D+Y K   V  AR VFD+MP +D V W
Sbjct: 172 ATAARCARAGRELHCHVVRRGIDADAVVWSALADMYAKCGRVDDARSVFDRMPVRDVVSW 231

Query: 178 NSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGL 237
            +M+          +   +F  M+R+ G   +  + A VL A AE    +LG ++     
Sbjct: 232 TAMVERYFDARRDGEGFRLFVRMLRS-GIQPNEFTYAGVLRACAEFTSEKLGKQVHGRMT 290

Query: 238 KLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLR 297
           K    D  +  + LV  YSK G++  A  +FR + + DL+S  AMISGY  NG+ + +LR
Sbjct: 291 KSRAGDSCFAESALVHMYSKYGDMGTAVRVFRGMPKLDLVSWTAMISGYAQNGQPDEALR 350

Query: 298 LFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYS 357
            F  LL S  R +  T VG+           L+ C H+  +  G+    S+  ++   Y 
Sbjct: 351 YFDMLLRSGCRPDHVTFVGV-----------LSACAHAGLVDKGL----SIFHSIKDEY- 394

Query: 358 RLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSS 417
                           E +   +  +I   +++GL E A  +   M    V PN    +S
Sbjct: 395 --------------GIEHTADHYACVIDLLSRSGLFERAEEMINTMS---VKPNKFLWAS 437

Query: 418 ILSACAQLGAISLGKWVHELVKSRNFE--------SNIYVSTALIDMYAKCGNIVE 465
           +L  C     + L +W  E +     E        +NIY S  L D       I+E
Sbjct: 438 LLGGCRIHKNVRLARWAAEALFEIEPENPATYVTLANIYASVGLFDEVENTRRIME 493



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 93/335 (27%), Positives = 162/335 (48%), Gaps = 4/335 (1%)

Query: 161 SARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGT-WLDST-SVAAVLP 218
           SAR +FD+MP +D   W++++S   ++   + ++ ++  M+R  G+  +D+  + ++ L 
Sbjct: 111 SARALFDRMPRRDHFSWSAIVSAHARHGQPRAALAIYRRMLREPGSAGVDNEFTASSALA 170

Query: 219 AVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLIS 278
           A    +  R G E+ C  ++ G      V + L   Y+KCG V+ A  +F  +   D++S
Sbjct: 171 AATAARCARAGRELHCHVVRRGIDADAVVWSALADMYAKCGRVDDARSVFDRMPVRDVVS 230

Query: 279 CNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCL 338
             AM+  Y    +     RLF ++L S  + N  T  G++     F    L   +H    
Sbjct: 231 WTAMVERYFDARRDGEGFRLFVRMLRSGIQPNEFTYAGVLRACAEFTSEKLGKQVHGRMT 290

Query: 339 KSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAIS 398
           KS    +    +AL  +YS+  +M  A ++F    +  L SW AMI+GY QNG  +EA+ 
Sbjct: 291 KSRAGDSCFAESALVHMYSKYGDMGTAVRVFRGMPKLDLVSWTAMISGYAQNGQPDEALR 350

Query: 399 LFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWV-HELVKSRNFESNIYVSTALIDMY 457
            F  +  S   P+ VT   +LSACA  G +  G  + H +      E        +ID+ 
Sbjct: 351 YFDMLLRSGCRPDHVTFVGVLSACAHAGLVDKGLSIFHSIKDEYGIEHTADHYACVIDLL 410

Query: 458 AKCGNIVEARELFDLMSHK-SEVTWNTMISGYGLH 491
           ++ G    A E+ + MS K ++  W +++ G  +H
Sbjct: 411 SRSGLFERAEEMINTMSVKPNKFLWASLLGGCRIH 445



 Score = 95.9 bits (237), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 64/218 (29%), Positives = 108/218 (49%), Gaps = 6/218 (2%)

Query: 362 MEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEM---QASKVAPNPVTVSSI 418
           + +AR LFD    +   SW+A+++ + ++G    A+++++ M     S    N  T SS 
Sbjct: 109 LASARALFDRMPRRDHFSWSAIVSAHARHGQPRAALAIYRRMLREPGSAGVDNEFTASSA 168

Query: 419 LSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSE 478
           L+A         G+ +H  V  R  +++  V +AL DMYAKCG + +AR +FD M  +  
Sbjct: 169 LAAATAARCARAGRELHCHVVRRGIDADAVVWSALADMYAKCGRVDDARSVFDRMPVRDV 228

Query: 479 VTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQS 538
           V+W  M+  Y       E  +LF  ML SGI+P+  T+  VL AC+     + G ++   
Sbjct: 229 VSWTAMVERYFDARRDGEGFRLFVRMLRSGIQPNEFTYAGVLRACAEFTSEKLGKQVHGR 288

Query: 539 MIHDH-GFKPLAEHYACMVDILGRAGQLEKALEFIKGL 575
           M     G    AE  + +V +  + G +  A+   +G+
Sbjct: 289 MTKSRAGDSCFAE--SALVHMYSKYGDMGTAVRVFRGM 324



 Score = 83.2 bits (204), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 73/304 (24%), Positives = 132/304 (43%), Gaps = 11/304 (3%)

Query: 27  QTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNE 86
           + H  ++  G   D    + LA   +       AR++F  +P  D+  +  ++  + +  
Sbjct: 183 ELHCHVVRRGIDADAVVWSALADMYAKCGRVDDARSVFDRMPVRDVVSWTAMVERYFDAR 242

Query: 87  MPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVG 146
                   +  + + + + P+ FTY+ VL A +      +G  +HG    S  G   F  
Sbjct: 243 RDGEGFRLFVRMLR-SGIQPNEFTYAGVLRACAEFTSEKLGKQVHGRMTKSRAGDSCFAE 301

Query: 147 AALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGT 206
           +ALV +Y K+  + +A +VF  MP+ D V W +MISG  +N    +++  F DM+   G 
Sbjct: 302 SALVHMYSKYGDMGTAVRVFRGMPKLDLVSWTAMISGYAQNGQPDEALRYF-DMLLRSGC 360

Query: 207 WLDSTSVAAVLPAVAEVQELRLGMEI-QCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAE 265
             D  +   VL A A    +  G+ I   +  + G          ++   S+ G  ERAE
Sbjct: 361 RPDHVTFVGVLSACAHAGLVDKGLSIFHSIKDEYGIEHTADHYACVIDLLSRSGLFERAE 420

Query: 266 LLFRDI-VRPDLISCNAMISGYTCNGKTESSLRLFR---QLLASAERVNSSTIVGLIPVF 321
            +   + V+P+     +++ G  C  +   ++RL R   + L   E  N +T V L  ++
Sbjct: 421 EMINTMSVKPNKFLWASLLGG--C--RIHKNVRLARWAAEALFEIEPENPATYVTLANIY 476

Query: 322 YPFG 325
              G
Sbjct: 477 ASVG 480


>gi|225454494|ref|XP_002276948.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
           mitochondrial-like [Vitis vinifera]
          Length = 913

 Score =  412 bits (1060), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 251/801 (31%), Positives = 409/801 (51%), Gaps = 84/801 (10%)

Query: 27  QTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCY----ARALFFSIPKPDLFLFN-VIIRG 81
           + H  +I  GF  DL    + A  L +F   C+    A  +F  +P P+  L+N  II  
Sbjct: 154 EIHGCLIKRGF--DLDVYLRCA--LMNFYGRCWGLEKANQVFHEMPNPEALLWNEAIILN 209

Query: 82  FSNNEMPKSSICF----YTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVS 137
             + ++ K    F    ++ L+  TA      T   VL A       +    +HG+    
Sbjct: 210 LQSEKLQKGVELFRKMQFSFLKAETA------TIVRVLQACGKMGALNAAKQIHGYVFRF 263

Query: 138 GYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVF 197
           G  SD+ +   L+ +Y K   ++ AR+VFD M  ++T  WNSMIS         D+  +F
Sbjct: 264 GLDSDVSLCNPLISMYSKNGKLELARRVFDSMENRNTSSWNSMISSYAALGFLNDAWSLF 323

Query: 198 -----GDMVRNGGTW-----------------------------LDSTSVAAVLPAVAEV 223
                 DM  +  TW                              +S+S+ +VL A++E+
Sbjct: 324 YELESSDMKPDIVTWNCLLSGHFLHGYKEEVLNILQRMQGEGFKPNSSSMTSVLQAISEL 383

Query: 224 QELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMI 283
             L +G E     L+ GF   VYV T L+  Y K   +  A+ +F ++   ++ + N+++
Sbjct: 384 GFLNMGKETHGYVLRNGFDCDVYVGTSLIDMYVKNHSLTSAQAVFDNMKNRNIFAWNSLV 443

Query: 284 SGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIV 343
           SGY+  G  E +LRL  Q+     + +  T  G+I  +  +G           C K  + 
Sbjct: 444 SGYSFKGMFEDALRLLNQMEKEGIKPDLVTWNGMISGYAMWG-----------CGKEAL- 491

Query: 344 SNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEM 403
              +VL    ++    N                + SW A+I+G +Q G   +++  F +M
Sbjct: 492 ---AVLHQTKSLGLTPN----------------VVSWTALISGSSQAGNNRDSLKFFAQM 532

Query: 404 QASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNI 463
           Q   V PN  +++ +L ACA L  +  GK +H L     F  +++V+TALIDMY+K  ++
Sbjct: 533 QQEGVMPNSASITCLLRACASLSLLQKGKEIHCLSIRNGFIEDVFVATALIDMYSKSSSL 592

Query: 464 VEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYAC 523
             A ++F  + +K+  +WN MI G+ + G G EA+ +F+EM   G+ P  +TF ++L AC
Sbjct: 593 KNAHKVFRRIQNKTLASWNCMIMGFAIFGLGKEAISVFNEMQKVGVGPDAITFTALLSAC 652

Query: 524 SHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAV 583
            ++GL+ EG + F SMI D+   P  EHY CMVD+LGRAG L++A + I  + ++P   +
Sbjct: 653 KNSGLIGEGWKYFDSMITDYRIVPRLEHYCCMVDLLGRAGYLDEAWDLIHTMPLKPDATI 712

Query: 584 WGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKK 643
           WGALLG+C IHK+   A  A++ LF+L+P N   ++L+ N+YS    +     +R+++  
Sbjct: 713 WGALLGSCRIHKNLKFAETAAKNLFKLEPNNSANYILMMNLYSIFNRWEDMDHLRELMGA 772

Query: 644 RKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHD 703
             +      + I++    HVF+S ++ HP +  IY  L +L  +M++ G+  +      +
Sbjct: 773 AGVRNRQVWSWIQINQRVHVFSSDEKPHPDAGKIYFELYQLVSEMKKLGYVPDVNCVYQN 832

Query: 704 VEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIV 763
           ++E EK+ ++  H+EKLAI +GLI  + G  IR+IKN R+C DCH+A K+IS V  R + 
Sbjct: 833 MDEVEKQKILLSHTEKLAITYGLIKMKAGEPIRVIKNTRICSDCHSAAKYISLVKARELF 892

Query: 764 VRDANRFHHFKGGVCSCGDYW 784
           +RD  RFHHF+ G CSC D+W
Sbjct: 893 LRDGVRFHHFREGKCSCNDFW 913



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 129/482 (26%), Positives = 227/482 (47%), Gaps = 41/482 (8%)

Query: 149 LVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNC-CFQDSIWVFGDMVRNGGTW 207
           L+  Y  F    SA  VF     ++ + WNS +     +       + VF ++    G  
Sbjct: 72  LISSYLGFGDFWSAAMVFYVGLPRNYLKWNSFVEEFKSSAGSLHIVLEVFKEL-HGKGVV 130

Query: 208 LDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELL 267
            DS   +  L     V ++ LGMEI    +K GF   VY+   L++FY +C  +E+A  +
Sbjct: 131 FDSEVYSVALKTCTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALMNFYGRCWGLEKANQV 190

Query: 268 FRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHL 327
           F ++  P+ +  N  I     + K +  + LFR++  S  +  ++TIV ++      G L
Sbjct: 191 FHEMPNPEALLWNEAIILNLQSEKLQKGVELFRKMQFSFLKAETATIVRVLQACGKMGAL 250

Query: 328 HLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGY 387
           +    IH +  + G+ S+ S+   L ++YS+  ++E AR++FD    ++ +SWN+MI+ Y
Sbjct: 251 NAAKQIHGYVFRFGLDSDVSLCNPLISMYSKNGKLELARRVFDSMENRNTSSWNSMISSY 310

Query: 388 TQNGLTEEAISLFQEMQASKVAPNPVT--------------------------------- 414
              G   +A SLF E+++S + P+ VT                                 
Sbjct: 311 AALGFLNDAWSLFYELESSDMKPDIVTWNCLLSGHFLHGYKEEVLNILQRMQGEGFKPNS 370

Query: 415 --VSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDL 472
             ++S+L A ++LG +++GK  H  V    F+ ++YV T+LIDMY K  ++  A+ +FD 
Sbjct: 371 SSMTSVLQAISELGFLNMGKETHGYVLRNGFDCDVYVGTSLIDMYVKNHSLTSAQAVFDN 430

Query: 473 MSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREG 532
           M +++   WN+++SGY   G   +AL+L ++M   GI+P  VT+  ++   +  G  +E 
Sbjct: 431 MKNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVTWNGMISGYAMWGCGKEA 490

Query: 533 DEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVE---PGPAVWGALLG 589
             +        G  P    +  ++    +AG    +L+F   +  E   P  A    LL 
Sbjct: 491 LAVLHQ-TKSLGLTPNVVSWTALISGSSQAGNNRDSLKFFAQMQQEGVMPNSASITCLLR 549

Query: 590 AC 591
           AC
Sbjct: 550 AC 551



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 109/497 (21%), Positives = 220/497 (44%), Gaps = 68/497 (13%)

Query: 107 DNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVF 166
           D+  YS  L   +   D  +G+ +HG  I  G+  D+++  AL++ Y +   ++ A +VF
Sbjct: 132 DSEVYSVALKTCTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALMNFYGRCWGLEKANQVF 191

Query: 167 DKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQEL 226
            +MP  + +LWN  I   +++   Q  + +F  M +      ++ ++  VL A  ++  L
Sbjct: 192 HEMPNPEALLWNEAIILNLQSEKLQKGVELFRKM-QFSFLKAETATIVRVLQACGKMGAL 250

Query: 227 RLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDI--------------- 271
               +I     + G    V +   L+S YSK G++E A  +F  +               
Sbjct: 251 NAAKQIHGYVFRFGLDSDVSLCNPLISMYSKNGKLELARRVFDSMENRNTSSWNSMISSY 310

Query: 272 --------------------VRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNS 311
                               ++PD+++ N ++SG+  +G  E  L + +++     + NS
Sbjct: 311 AALGFLNDAWSLFYELESSDMKPDIVTWNCLLSGHFLHGYKEEVLNILQRMQGEGFKPNS 370

Query: 312 STIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDE 371
           S++  ++      G L++    H + L++G   +  V T+L  +Y + + + +A+ +FD 
Sbjct: 371 SSMTSVLQAISELGFLNMGKETHGYVLRNGFDCDVYVGTSLIDMYVKNHSLTSAQAVFDN 430

Query: 372 SSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLG 431
              +++ +WN++++GY+  G+ E+A+ L  +M+   + P+ VT + ++S  A  G     
Sbjct: 431 MKNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVTWNGMISGYAMWGCGKEA 490

Query: 432 KWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLH 491
             V    KS     N+   TAL                               ISG    
Sbjct: 491 LAVLHQTKSLGLTPNVVSWTAL-------------------------------ISGSSQA 519

Query: 492 GHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEH 551
           G+  ++L+ F++M   G+ P+  +   +L AC+   L+++G EI    I + GF      
Sbjct: 520 GNNRDSLKFFAQMQQEGVMPNSASITCLLRACASLSLLQKGKEIHCLSIRN-GFIEDVFV 578

Query: 552 YACMVDILGRAGQLEKA 568
              ++D+  ++  L+ A
Sbjct: 579 ATALIDMYSKSSSLKNA 595


>gi|357166812|ref|XP_003580863.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15130-like [Brachypodium distachyon]
          Length = 707

 Score =  412 bits (1060), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 241/698 (34%), Positives = 370/698 (53%), Gaps = 27/698 (3%)

Query: 114 VLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKD 173
           +L A++A      G  LHG  +  G+GSD  +G  L+D+Y K   ++ A +VF  MPE++
Sbjct: 10  MLRASAASSAIHGGAQLHGALLKLGFGSDTMLGNNLIDMYAKCGELRMAGEVFGGMPERN 69

Query: 174 TVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQ 233
            V W +++ G +++   ++ + + G M        +  +++A L A   V ++  G+ I 
Sbjct: 70  VVSWTALMVGFLRHGDARECLRLLGAMRSLSDVAPNEFTLSASLKACGVVGDMAAGVWIH 129

Query: 234 CLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTE 293
              ++ GF  H  V   LV  YSK G +  A  +F   V  +L++ NAMISGY   G   
Sbjct: 130 GACVRAGFEGHHVVANSLVLLYSKGGRIGDARRVFDGTVFRNLVTWNAMISGYAHAGHGR 189

Query: 294 SSLRLFRQLLASAE-----RVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGI--VSNS 346
            SL +FR++    +     + +  T   L+      G       +H+  +  G+   SN+
Sbjct: 190 DSLLVFREMQQRRQEEEDHQPDEFTFASLLKACGSLGAAREGAQVHAAMVIRGVSTASNA 249

Query: 347 SVLTALSTVYSRLN-EMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQA 405
            +  AL  +Y +    +  A ++F+   +K+   W  +I G+ Q G  +EA+ LF    +
Sbjct: 250 ILAGALLDMYVKCRCLLPMAMQVFNRLEQKNAIQWTTVIVGHAQEGQVKEAMELFGRFWS 309

Query: 406 SKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVE 465
           S V  +   +SS++   A    +  G+ VH          ++ V+ +LIDMY KCG   E
Sbjct: 310 SGVRADGHVLSSVVGVFADFALVEQGRQVHCYTVKTPAGLDVSVANSLIDMYHKCGLTDE 369

Query: 466 ARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSH 525
           A   F  +  ++ V+W  MI+G G HGHG EA+ +F EM   G+ P  V +L++L ACSH
Sbjct: 370 AARRFREVPARNVVSWTAMINGLGKHGHGQEAIHMFEEMRAEGVEPDEVAYLALLSACSH 429

Query: 526 AGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWG 585
           +GLV E    F ++ HD   +P AEHYACMVD+LGRAG+L +A + +  + + P   VW 
Sbjct: 430 SGLVEECRRYFSAIRHDRRLRPRAEHYACMVDLLGRAGELSEAKDLVATMPMAPTVGVWQ 489

Query: 586 ALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRK 645
            LL AC +HK+  + R A E L  +D +N   +V+LSNI++   D+ +   VR  +++R 
Sbjct: 490 TLLSACRVHKNVTVGREAGETLLAIDGDNPVNYVMLSNIFAEAGDWRECQRVRGAMRRRG 549

Query: 646 LAKAPGCTLIEVGGTPHVF-TSGDQLHPQSTAIYAMLEKLNGKMREA-GFQTETV----- 698
           L K  GC+ +EVG   H F   GD  HP++  I  +L  +   MRE  G+   +      
Sbjct: 550 LRKQGGCSWVEVGKEAHFFYGGGDDSHPRAADICCVLRDVERTMRERLGYSPGSSSSSSE 609

Query: 699 TALHDVEEEEKELMMKVHSEKLAIAF------------GLIATEPGTEIRIIKNLRVCLD 746
            ALHDV+EE +   ++ HSE+LA+              G+  T+    IR+ KNLRVC D
Sbjct: 610 AALHDVDEESRAESLRAHSERLAVGLWLLLHHDHDHGEGMGGTKRKEVIRVYKNLRVCGD 669

Query: 747 CHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           CH   K +S V GRV+VVRDANRFH F+ GVCSC DYW
Sbjct: 670 CHEFFKGLSSVVGRVLVVRDANRFHRFEDGVCSCKDYW 707



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 135/552 (24%), Positives = 247/552 (44%), Gaps = 27/552 (4%)

Query: 7   QSRNLFLSLLKGAKTQSQL---TQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATC----Y 59
           + R +   +L+ +   S +    Q H  ++  GF +D    T L + L D  A C     
Sbjct: 2   ERRKMIADMLRASAASSAIHGGAQLHGALLKLGFGSD----TMLGNNLIDMYAKCGELRM 57

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           A  +F  +P+ ++  +  ++ GF  +   +  +     +R  + + P+ FT S  L A  
Sbjct: 58  AGEVFGGMPERNVVSWTALMVGFLRHGDARECLRLLGAMRSLSDVAPNEFTLSASLKACG 117

Query: 120 ACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNS 179
              D + GV +HG  + +G+     V  +LV LY K   +  AR+VFD    ++ V WN+
Sbjct: 118 VVGDMAAGVWIHGACVRAGFEGHHVVANSLVLLYSKGGRIGDARRVFDGTVFRNLVTWNA 177

Query: 180 MISGLMKNCCFQDSIWVFGDMVRNGGT----WLDSTSVAAVLPAVAEVQELRLGMEIQCL 235
           MISG       +DS+ VF +M +          D  + A++L A   +   R G ++   
Sbjct: 178 MISGYAHAGHGRDSLLVFREMQQRRQEEEDHQPDEFTFASLLKACGSLGAAREGAQVHAA 237

Query: 236 GLKLGFH--DHVYVLTGLVSFYSKCG-EVERAELLFRDIVRPDLISCNAMISGYTCNGKT 292
            +  G     +  +   L+  Y KC   +  A  +F  + + + I    +I G+   G+ 
Sbjct: 238 MVIRGVSTASNAILAGALLDMYVKCRCLLPMAMQVFNRLEQKNAIQWTTVIVGHAQEGQV 297

Query: 293 ESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTAL 352
           + ++ LF +  +S  R +   +  ++ VF  F  +     +H + +K+    + SV  +L
Sbjct: 298 KEAMELFGRFWSSGVRADGHVLSSVVGVFADFALVEQGRQVHCYTVKTPAGLDVSVANSL 357

Query: 353 STVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNP 412
             +Y +    + A + F E   +++ SW AMI G  ++G  +EAI +F+EM+A  V P+ 
Sbjct: 358 IDMYHKCGLTDEAARRFREVPARNVVSWTAMINGLGKHGHGQEAIHMFEEMRAEGVEPDE 417

Query: 413 VTVSSILSACAQLGAI-SLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFD 471
           V   ++LSAC+  G +    ++   +   R           ++D+  + G + EA++L  
Sbjct: 418 VAYLALLSACSHSGLVEECRRYFSAIRHDRRLRPRAEHYACMVDLLGRAGELSEAKDLVA 477

Query: 472 LMSHKSEV-TWNTMISGYGLHGH---GLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAG 527
            M     V  W T++S   +H +   G EA +    +   G  P     LS ++A   AG
Sbjct: 478 TMPMAPTVGVWQTLLSACRVHKNVTVGREAGETLLAI--DGDNPVNYVMLSNIFA--EAG 533

Query: 528 LVREGDEIFQSM 539
             RE   +  +M
Sbjct: 534 DWRECQRVRGAM 545


>gi|449470118|ref|XP_004152765.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g25360-like [Cucumis sativus]
          Length = 797

 Score =  412 bits (1060), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 250/768 (32%), Positives = 383/768 (49%), Gaps = 108/768 (14%)

Query: 125 SIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPE------------- 171
           S+   +H H I SG+         L+++Y K S V  AR++F+++P              
Sbjct: 30  SLARAVHAHMIASGFKPRGHFLNRLLEMYCKSSNVVYARQLFEEIPNPDAIARTTLITAY 89

Query: 172 --------------------KDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDST 211
                               +D+V +N+MI+G   N     ++ +F  M R+     D T
Sbjct: 90  CALGNLELGREIFNGTPLYMRDSVFYNAMITGYAHNGDGHSALELFRAMRRDDFRPDDFT 149

Query: 212 SVAAVLPAVAEVQELRLGMEIQCLGLKLGFH-DHVYVLTGLVSFYSK--------CGEVE 262
             + +   V  V   +   ++ C  +K G       VL  L+S Y K        C  + 
Sbjct: 150 FTSVLSALVLFVGNEQQCGQMHCAVVKTGMGCVSSSVLNALLSVYVKRASELGIPCSAMV 209

Query: 263 RAELLFRDIVRPDLISC-------------------------------NAMISGYTCNGK 291
            A  LF ++ + D ++                                NAMISGY   G 
Sbjct: 210 SARKLFDEMPKRDELTWTTMITGYVRNDDLNGAREVFEAMVENLGAAWNAMISGYVHCGC 269

Query: 292 TESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSS---- 347
            + +L L R++     + +  T   +I      G   +   +H++ LK+ +  N S    
Sbjct: 270 FQEALTLCRKMRFLGIQFDDITYTTIISACANVGSFQMGKQMHAYILKNELNPNHSFCLS 329

Query: 348 VLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYT------------------- 388
           V  AL T+Y + N+++ ARK+F     +++ +WNA+++GY                    
Sbjct: 330 VSNALITLYCKNNKVDEARKIFYAMPVRNIITWNAILSGYVNAGRMEEAKSFFEEMPVKN 389

Query: 389 ------------QNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHE 436
                       QNG  +E + LF++M+     P     +  L+AC+ LGA+  G+ +H 
Sbjct: 390 LLTLTVMISGLAQNGFGDEGLKLFKQMRLDGFEPCDFAFAGALTACSVLGALENGRQLHA 449

Query: 437 LVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLE 496
            +    +ES++ V  A+I MYAKCG +  A  +F  M     V+WN+MI+  G HGHG++
Sbjct: 450 QLVHLGYESSLSVGNAMISMYAKCGVVEAAESVFVTMPSVDLVSWNSMIAALGQHGHGVK 509

Query: 497 ALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMV 556
           A++LF +ML  G+ P  +TFL+VL ACSHAGLV +G   F SM+  +G  P  +HYA MV
Sbjct: 510 AIELFDQMLKEGVFPDRITFLTVLTACSHAGLVEKGRHYFNSMLESYGITPCEDHYARMV 569

Query: 557 DILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVG 616
           D+  RAG    A   I  +  +PG  VW ALL  C IH + +L   A+E+LF+L P+N G
Sbjct: 570 DLFCRAGMFSYARIVIDSMPSKPGAPVWEALLAGCRIHGNMDLGIEAAEQLFKLMPQNDG 629

Query: 617 YHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTA 676
            +VLLSNIY+    +   A VR++++ + + K P C+ IEV    HVF   D +HP+  +
Sbjct: 630 TYVLLSNIYADVGRWNDVAKVRKLMRDQAVRKEPACSWIEVENKVHVFMVDDDVHPEVLS 689

Query: 677 IYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIR 736
           +Y  LE+L  +M++ G+  +T   LHD+E E+KE  +  HSEKLA+ FG++   P   +R
Sbjct: 690 VYRYLEQLGLEMKKLGYIPDTKFVLHDMEYEQKEHALSTHSEKLAVGFGIMKLPPDATVR 749

Query: 737 IIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           + KN+R+C DCH A KF+SKV  R I+VRD  RFHHFK G CSC DYW
Sbjct: 750 VFKNIRICGDCHNAFKFMSKVARREIIVRDRKRFHHFKNGDCSCRDYW 797



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 143/596 (23%), Positives = 243/596 (40%), Gaps = 125/596 (20%)

Query: 28  THAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLF-------------- 73
            HA +I  GF+     + +L           YAR LF  IP PD                
Sbjct: 35  VHAHMIASGFKPRGHFLNRLLEMYCKSSNVVYARQLFEEIPNPDAIARTTLITAYCALGN 94

Query: 74  -------------------LFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFV 114
                               +N +I G+++N    S++  +  +R++    PD+FT++ V
Sbjct: 95  LELGREIFNGTPLYMRDSVFYNAMITGYAHNGDGHSALELFRAMRRDD-FRPDDFTFTSV 153

Query: 115 LSA-------ASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFK--------FSWV 159
           LSA          C      V+  G   VS       V  AL+ +Y K         S +
Sbjct: 154 LSALVLFVGNEQQCGQMHCAVVKTGMGCVSSS-----VLNALLSVYVKRASELGIPCSAM 208

Query: 160 KSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRN-GGTW----------- 207
            SARK+FD+MP++D + W +MI+G ++N     +  VF  MV N G  W           
Sbjct: 209 VSARKLFDEMPKRDELTWTTMITGYVRNDDLNGAREVFEAMVENLGAAWNAMISGYVHCG 268

Query: 208 ------------------LDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFH-DHVYVL 248
                              D  +   ++ A A V   ++G ++    LK   + +H + L
Sbjct: 269 CFQEALTLCRKMRFLGIQFDDITYTTIISACANVGSFQMGKQMHAYILKNELNPNHSFCL 328

Query: 249 T---GLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESS---------- 295
           +    L++ Y K  +V+ A  +F  +   ++I+ NA++SGY   G+ E +          
Sbjct: 329 SVSNALITLYCKNNKVDEARKIFYAMPVRNIITWNAILSGYVNAGRMEEAKSFFEEMPVK 388

Query: 296 ---------------------LRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIH 334
                                L+LF+Q+             G +      G L     +H
Sbjct: 389 NLLTLTVMISGLAQNGFGDEGLKLFKQMRLDGFEPCDFAFAGALTACSVLGALENGRQLH 448

Query: 335 SFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTE 394
           +  +  G  S+ SV  A+ ++Y++   +EAA  +F       L SWN+MIA   Q+G   
Sbjct: 449 AQLVHLGYESSLSVGNAMISMYAKCGVVEAAESVFVTMPSVDLVSWNSMIAALGQHGHGV 508

Query: 395 EAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGK-WVHELVKSRNFESNIYVSTAL 453
           +AI LF +M    V P+ +T  ++L+AC+  G +  G+ + + +++S            +
Sbjct: 509 KAIELFDQMLKEGVFPDRITFLTVLTACSHAGLVEKGRHYFNSMLESYGITPCEDHYARM 568

Query: 454 IDMYAKCGNIVEARELFDLMSHKSEV-TWNTMISGYGLHGH---GLEAL-QLFSEM 504
           +D++ + G    AR + D M  K     W  +++G  +HG+   G+EA  QLF  M
Sbjct: 569 VDLFCRAGMFSYARIVIDSMPSKPGAPVWEALLAGCRIHGNMDLGIEAAEQLFKLM 624



 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 36/130 (27%), Positives = 54/130 (41%), Gaps = 33/130 (25%)

Query: 426 GAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSH---------- 475
            + SL + VH  + +  F+   +    L++MY K  N+V AR+LF+ + +          
Sbjct: 27  ASFSLARAVHAHMIASGFKPRGHFLNRLLEMYCKSSNVVYARQLFEEIPNPDAIARTTLI 86

Query: 476 -----------------------KSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPS 512
                                  +  V +N MI+GY  +G G  AL+LF  M     RP 
Sbjct: 87  TAYCALGNLELGREIFNGTPLYMRDSVFYNAMITGYAHNGDGHSALELFRAMRRDDFRPD 146

Query: 513 GVTFLSVLYA 522
             TF SVL A
Sbjct: 147 DFTFTSVLSA 156


>gi|242088929|ref|XP_002440297.1| hypothetical protein SORBIDRAFT_09g029295 [Sorghum bicolor]
 gi|241945582|gb|EES18727.1| hypothetical protein SORBIDRAFT_09g029295 [Sorghum bicolor]
          Length = 869

 Score =  412 bits (1060), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 252/732 (34%), Positives = 389/732 (53%), Gaps = 5/732 (0%)

Query: 51  LSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFT 110
           L  F  T +A  +F  +P+ D+F +NV++ G+    + + ++  Y H      + PD +T
Sbjct: 139 LVRFGETWHAWRVFAKMPERDVFSWNVMVGGYGKAGLLEEALDLY-HRMMWAGVRPDVYT 197

Query: 111 YSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMP 170
           +  VL +     D  +G  +H H +  G+  ++ V  AL+ +Y K   V +ARKVFD M 
Sbjct: 198 FPCVLRSCGGVPDWRMGREVHAHVLRFGFAEEVDVLNALMTMYAKCGDVVAARKVFDSMA 257

Query: 171 EKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGM 230
             D + WN+MI+G  +N      + +F  M+++     +  ++ +V  A   + ++    
Sbjct: 258 VMDCISWNAMIAGHFENGECNAGLELFLTMLQDE-VQPNLMTITSVTVASGLLSDITFAK 316

Query: 231 EIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNG 290
           E+  L +K GF   V     L+  Y+  G + +A  +F  +   D +S  AMISGY  NG
Sbjct: 317 EMHGLAVKRGFATDVAFCNSLIQMYASLGMMGQARTVFSRMDTRDAMSWTAMISGYEKNG 376

Query: 291 KTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLT 350
             + +L ++  +  +    +  TI   +      G L +   +H      G +S   V  
Sbjct: 377 FPDKALEVYALMEVNNVSPDDITIASALAACACLGSLDVGVKLHELAESKGFMSYVVVTN 436

Query: 351 ALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAP 410
           AL  +Y++   ++ A ++F    EK + SW++MIAG+  N    EA+  F+ M A  V P
Sbjct: 437 ALLEMYAKSKRIDKAIEVFKCMPEKDVVSWSSMIAGFCFNHRNFEALYYFRHMLAD-VKP 495

Query: 411 NPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELF 470
           N VT  + L+ACA  GA+  GK +H  V         Y+  ALID+Y KCG    A   F
Sbjct: 496 NSVTFIAALAACAATGALRSGKEIHAHVLRCGIAYEGYLPNALIDLYVKCGQTGYAWAQF 555

Query: 471 DLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVR 530
                K  V+WN MI+G+  HG+G  AL  F++M+  G  P  VTF+++L ACS  G+V 
Sbjct: 556 CAHGAKDVVSWNIMIAGFVAHGNGETALSFFNQMVKIGECPDEVTFVALLCACSRGGMVS 615

Query: 531 EGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGA 590
           EG E+F SM   +   P  +HYACMVD+L R GQL +A  FI  + + P  AVWGALL  
Sbjct: 616 EGWELFHSMTDKYSIVPNLKHYACMVDLLSRVGQLTEAYNFINEMPITPDAAVWGALLNG 675

Query: 591 CMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAP 650
           C IH+   L  +A++ + EL+P + GYHVLL ++Y+    + + A VR+ ++++ L    
Sbjct: 676 CRIHRHVELGELAAKYVLELEPNDAGYHVLLCDLYADAGIWDKLARVRKTMREKGLDHDS 735

Query: 651 GCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKE 710
           GC+ +EV G  H F + D+ HPQ   I  +LE +  +M+ +G     V +    ++  K+
Sbjct: 736 GCSWVEVKGVVHAFLTDDESHPQIREINTVLEGIYERMKASG--CAPVESHSPEDKVLKD 793

Query: 711 LMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRF 770
            +   HSE+LA+AFGLI T PGT I + KN   C  CH   K IS +  R I+VRD+ + 
Sbjct: 794 DIFCGHSERLAVAFGLINTTPGTSISVTKNQYTCQSCHRILKMISYIVRRDIIVRDSKQV 853

Query: 771 HHFKGGVCSCGD 782
           HHFK G CSCGD
Sbjct: 854 HHFKDGSCSCGD 865



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 138/426 (32%), Positives = 231/426 (54%), Gaps = 11/426 (2%)

Query: 143 LFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVR 202
           L +G A++ +  +F     A +VF KMPE+D   WN M+ G  K    ++++ ++  M+ 
Sbjct: 129 LRLGNAMLSMLVRFGETWHAWRVFAKMPERDVFSWNVMVGGYGKAGLLEEALDLYHRMMW 188

Query: 203 NGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVE 262
             G   D  +   VL +   V + R+G E+    L+ GF + V VL  L++ Y+KCG+V 
Sbjct: 189 -AGVRPDVYTFPCVLRSCGGVPDWRMGREVHAHVLRFGFAEEVDVLNALMTMYAKCGDVV 247

Query: 263 RAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFY 322
            A  +F  +   D IS NAMI+G+  NG+  + L LF  +L    + N  TI  +     
Sbjct: 248 AARKVFDSMAVMDCISWNAMIAGHFENGECNAGLELFLTMLQDEVQPNLMTITSVTVASG 307

Query: 323 PFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNA 382
               +     +H   +K G  ++ +   +L  +Y+ L  M  AR +F     +   SW A
Sbjct: 308 LLSDITFAKEMHGLAVKRGFATDVAFCNSLIQMYASLGMMGQARTVFSRMDTRDAMSWTA 367

Query: 383 MIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRN 442
           MI+GY +NG  ++A+ ++  M+ + V+P+ +T++S L+ACA LG++ +G  +HEL +S+ 
Sbjct: 368 MISGYEKNGFPDKALEVYALMEVNNVSPDDITIASALAACACLGSLDVGVKLHELAESKG 427

Query: 443 FESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFS 502
           F S + V+ AL++MYAK   I +A E+F  M  K  V+W++MI+G+  +    EAL  F 
Sbjct: 428 FMSYVVVTNALLEMYAKSKRIDKAIEVFKCMPEKDVVSWSSMIAGFCFNHRNFEALYYFR 487

Query: 503 EMLHSGIRPSGVTFLSVLYACSHAGLVREGDEI----FQSMIHDHGFKPLAEHYACMVDI 558
            ML + ++P+ VTF++ L AC+  G +R G EI     +  I   G+ P A     ++D+
Sbjct: 488 HML-ADVKPNSVTFIAALAACAATGALRSGKEIHAHVLRCGIAYEGYLPNA-----LIDL 541

Query: 559 LGRAGQ 564
             + GQ
Sbjct: 542 YVKCGQ 547



 Score =  166 bits (419), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 124/470 (26%), Positives = 220/470 (46%), Gaps = 7/470 (1%)

Query: 27  QTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRG-FSNN 85
           + HA ++  GF  ++  +  L    +       AR +F S+   D   +N +I G F N 
Sbjct: 216 EVHAHVLRFGFAEEVDVLNALMTMYAKCGDVVAARKVFDSMAVMDCISWNAMIAGHFENG 275

Query: 86  EMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFV 145
           E       F T L+    + P+  T + V  A+    D +    +HG A+  G+ +D+  
Sbjct: 276 ECNAGLELFLTMLQDE--VQPNLMTITSVTVASGLLSDITFAKEMHGLAVKRGFATDVAF 333

Query: 146 GAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGG 205
             +L+ +Y     +  AR VF +M  +D + W +MISG  KN     ++ V+  M  N  
Sbjct: 334 CNSLIQMYASLGMMGQARTVFSRMDTRDAMSWTAMISGYEKNGFPDKALEVYALMEVNNV 393

Query: 206 TWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAE 265
           +  D  ++A+ L A A +  L +G+++  L    GF  +V V   L+  Y+K   +++A 
Sbjct: 394 S-PDDITIASALAACACLGSLDVGVKLHELAESKGFMSYVVVTNALLEMYAKSKRIDKAI 452

Query: 266 LLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFG 325
            +F+ +   D++S ++MI+G+  N +   +L  FR +LA   + NS T +  +      G
Sbjct: 453 EVFKCMPEKDVVSWSSMIAGFCFNHRNFEALYYFRHMLADV-KPNSVTFIAALAACAATG 511

Query: 326 HLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIA 385
            L     IH+  L+ GI     +  AL  +Y +  +   A   F     K + SWN MIA
Sbjct: 512 ALRSGKEIHAHVLRCGIAYEGYLPNALIDLYVKCGQTGYAWAQFCAHGAKDVVSWNIMIA 571

Query: 386 GYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLG-KWVHELVKSRNFE 444
           G+  +G  E A+S F +M      P+ VT  ++L AC++ G +S G +  H +    +  
Sbjct: 572 GFVAHGNGETALSFFNQMVKIGECPDEVTFVALLCACSRGGMVSEGWELFHSMTDKYSIV 631

Query: 445 SNIYVSTALIDMYAKCGNIVEARELFDLMSHKSE-VTWNTMISGYGLHGH 493
            N+     ++D+ ++ G + EA    + M    +   W  +++G  +H H
Sbjct: 632 PNLKHYACMVDLLSRVGQLTEAYNFINEMPITPDAAVWGALLNGCRIHRH 681



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/175 (23%), Positives = 74/175 (42%), Gaps = 1/175 (0%)

Query: 403 MQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGN 462
           +++S   P+     ++   C    A+  G         R+    + +  A++ M  + G 
Sbjct: 85  LESSAEPPDEDAYVALFRLCEWRRAVEPGLRACAHADDRHAWFGLRLGNAMLSMLVRFGE 144

Query: 463 IVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYA 522
              A  +F  M  +   +WN M+ GYG  G   EAL L+  M+ +G+RP   TF  VL +
Sbjct: 145 TWHAWRVFAKMPERDVFSWNVMVGGYGKAGLLEEALDLYHRMMWAGVRPDVYTFPCVLRS 204

Query: 523 CSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAV 577
           C      R G E+   ++   GF    +    ++ +  + G +  A +    +AV
Sbjct: 205 CGGVPDWRMGREVHAHVLR-FGFAEEVDVLNALMTMYAKCGDVVAARKVFDSMAV 258


>gi|224104375|ref|XP_002313416.1| predicted protein [Populus trichocarpa]
 gi|222849824|gb|EEE87371.1| predicted protein [Populus trichocarpa]
          Length = 650

 Score =  412 bits (1059), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 220/554 (39%), Positives = 343/554 (61%), Gaps = 6/554 (1%)

Query: 237 LKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSL 296
           L+ GF    ++ T L++ YS    ++ A  +F       +   NA+    +  G  E  L
Sbjct: 97  LENGFDQDPFLATKLINMYSFFDSIDNARKVFDKTRNRTIYVYNALFRALSLAGHGEEVL 156

Query: 297 RLFRQLLA---SAERVNSSTIVGLIPVFYPF-GHLHLTNCIHSFCLKSGIVSNSSVLTAL 352
            ++R++ +    ++R   + ++        F   L+    IH+  L+ G      ++T L
Sbjct: 157 NMYRRMNSIGIPSDRFTYTYVLKACVASECFVSLLNKGREIHAHILRHGYDGYVHIMTTL 216

Query: 353 STVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEM--QASKVAP 410
             +Y++   +  A  +F++   K++ SW+AMIA Y +NG   EA+ LF+E+  +   + P
Sbjct: 217 VDMYAKFGCVSNASCVFNQMPVKNVVSWSAMIACYAKNGKAFEALELFRELMLETQDLCP 276

Query: 411 NPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELF 470
           N VT+ S+L ACA L A+  G+ +H  +  +  +S + V +AL+ MYA+CG +   + +F
Sbjct: 277 NSVTMVSVLQACAALAALEQGRLIHGYILRKGLDSILPVISALVTMYARCGKLELGQRVF 336

Query: 471 DLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVR 530
           D M  +  V+WN++IS YG+HG G +A+ +F EM ++G+ PS ++F+SVL ACSHAGLV 
Sbjct: 337 DQMDKRDVVSWNSLISSYGVHGFGKKAIGIFEEMTYNGVEPSPISFVSVLGACSHAGLVD 396

Query: 531 EGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGA 590
           EG  +F SM   HG  P  EHYACMVD+LGRA +LE+A + I+ + +EPGP VWG+LLG+
Sbjct: 397 EGKMLFNSMHVAHGICPSVEHYACMVDLLGRANRLEEAAKIIENMRIEPGPKVWGSLLGS 456

Query: 591 CMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAP 650
           C IH +  LA  AS +LF+L+P N G +VLL++IY+    +     V+++++ R L K P
Sbjct: 457 CRIHCNVELAERASIRLFDLEPTNAGNYVLLADIYAEAGMWDGVKRVKKLLEARGLQKVP 516

Query: 651 GCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKE 710
           G + IEV    + F S D+++P+   ++A+L KL+ +++E G+  +T   L+D++  EKE
Sbjct: 517 GRSWIEVKRKIYSFVSVDEVNPRMEQLHALLVKLSMELKEEGYVPQTKVVLYDLKAAEKE 576

Query: 711 LMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRF 770
            ++  HSEKLA+AFGLI +  G  IRI K+LR+C DCH+ TKFISK   + I+VRD NRF
Sbjct: 577 RIVLGHSEKLAVAFGLINSSKGEVIRITKSLRLCEDCHSFTKFISKFANKEILVRDVNRF 636

Query: 771 HHFKGGVCSCGDYW 784
           HHF+ GVCSCGDYW
Sbjct: 637 HHFRDGVCSCGDYW 650



 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 116/447 (25%), Positives = 216/447 (48%), Gaps = 27/447 (6%)

Query: 67  IPKPDL------FLFNVIIRGFSNNEMPKSSICFYTHLRKNTAL-----TPDNFTYSFVL 115
           +P+P L         N       NN++ +S +C   +L +   L      P   TY  ++
Sbjct: 19  LPRPSLKPPICSITLNPTASTADNNKLIQS-LCKQGNLTQALELLSLEPNPAQHTYELLI 77

Query: 116 SAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTV 175
            + +          +H H + +G+  D F+   L+++Y  F  + +ARKVFDK   +   
Sbjct: 78  LSCTHQNSLLDAQRVHRHLLENGFDQDPFLATKLINMYSFFDSIDNARKVFDKTRNRTIY 137

Query: 176 LWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAE----VQELRLGME 231
           ++N++   L      ++ + ++  M  + G   D  +   VL A       V  L  G E
Sbjct: 138 VYNALFRALSLAGHGEEVLNMYRRM-NSIGIPSDRFTYTYVLKACVASECFVSLLNKGRE 196

Query: 232 IQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGK 291
           I    L+ G+  +V+++T LV  Y+K G V  A  +F  +   +++S +AMI+ Y  NGK
Sbjct: 197 IHAHILRHGYDGYVHIMTTLVDMYAKFGCVSNASCVFNQMPVKNVVSWSAMIACYAKNGK 256

Query: 292 TESSLRLFRQLLASAERV--NSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVL 349
              +L LFR+L+   + +  NS T+V ++        L     IH + L+ G+ S   V+
Sbjct: 257 AFEALELFRELMLETQDLCPNSVTMVSVLQACAALAALEQGRLIHGYILRKGLDSILPVI 316

Query: 350 TALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVA 409
           +AL T+Y+R  ++E  +++FD+  ++ + SWN++I+ Y  +G  ++AI +F+EM  + V 
Sbjct: 317 SALVTMYARCGKLELGQRVFDQMDKRDVVSWNSLISSYGVHGFGKKAIGIFEEMTYNGVE 376

Query: 410 PNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVST----ALIDMYAKCGNIVE 465
           P+P++  S+L AC+  G +  GK    L  S +    I  S      ++D+  +   + E
Sbjct: 377 PSPISFVSVLGACSHAGLVDEGKM---LFNSMHVAHGICPSVEHYACMVDLLGRANRLEE 433

Query: 466 ARELFDLMS-HKSEVTWNTMISGYGLH 491
           A ++ + M        W +++    +H
Sbjct: 434 AAKIIENMRIEPGPKVWGSLLGSCRIH 460



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 112/456 (24%), Positives = 204/456 (44%), Gaps = 47/456 (10%)

Query: 27  QTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNE 86
           + H  ++ +GF  D    TKL +  S F +   AR +F       ++++N + R  S   
Sbjct: 91  RVHRHLLENGFDQDPFLATKLINMYSFFDSIDNARKVFDKTRNRTIYVYNALFRALSLAG 150

Query: 87  MPKSSICFYTHLRKNTALTPDNFTYSFVLSAASAC-CDRSI---GVLLHGHAIVSGYGSD 142
             +  +  Y  +  +  +  D FTY++VL A  A  C  S+   G  +H H +  GY   
Sbjct: 151 HGEEVLNMYRRM-NSIGIPSDRFTYTYVLKACVASECFVSLLNKGREIHAHILRHGYDGY 209

Query: 143 LFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGD-MV 201
           + +   LVD+Y KF  V +A  VF++MP K+ V W++MI+   KN    +++ +F + M+
Sbjct: 210 VHIMTTLVDMYAKFGCVSNASCVFNQMPVKNVVSWSAMIACYAKNGKAFEALELFRELML 269

Query: 202 RNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEV 261
                  +S ++ +VL A A +  L  G  I    L+ G    + V++ LV+ Y++CG++
Sbjct: 270 ETQDLCPNSVTMVSVLQACAALAALEQGRLIHGYILRKGLDSILPVISALVTMYARCGKL 329

Query: 262 ERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVF 321
           E  + +F  + + D++S N++IS Y  +G  + ++ +F ++          T  G+ P  
Sbjct: 330 ELGQRVFDQMDKRDVVSWNSLISSYGVHGFGKKAIGIFEEM----------TYNGVEPSP 379

Query: 322 YPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWN 381
             F  + L  C H     +G+V    +L          N M  A  +       S+  + 
Sbjct: 380 ISFVSV-LGACSH-----AGLVDEGKML---------FNSMHVAHGIC-----PSVEHYA 419

Query: 382 AMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSAC--------AQLGAISLGKW 433
            M+    +    EEA  + + M   ++ P P    S+L +C        A+  +I L   
Sbjct: 420 CMVDLLGRANRLEEAAKIIENM---RIEPGPKVWGSLLGSCRIHCNVELAERASIRLFDL 476

Query: 434 VHELVKSRNFESNIYVSTALIDMYAKCGNIVEAREL 469
                 +    ++IY    + D   +   ++EAR L
Sbjct: 477 EPTNAGNYVLLADIYAEAGMWDGVKRVKKLLEARGL 512



 Score = 72.4 bits (176), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 54/194 (27%), Positives = 96/194 (49%), Gaps = 7/194 (3%)

Query: 12  FLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPD 71
           F+SLL   +      + HA I+ HG+   +  +T L    + F     A  +F  +P  +
Sbjct: 187 FVSLLNKGR------EIHAHILRHGYDGYVHIMTTLVDMYAKFGCVSNASCVFNQMPVKN 240

Query: 72  LFLFNVIIRGFSNNEMPKSSICFYTHLRKNTA-LTPDNFTYSFVLSAASACCDRSIGVLL 130
           +  ++ +I  ++ N     ++  +  L   T  L P++ T   VL A +A      G L+
Sbjct: 241 VVSWSAMIACYAKNGKAFEALELFRELMLETQDLCPNSVTMVSVLQACAALAALEQGRLI 300

Query: 131 HGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCF 190
           HG+ +  G  S L V +ALV +Y +   ++  ++VFD+M ++D V WNS+IS    +   
Sbjct: 301 HGYILRKGLDSILPVISALVTMYARCGKLELGQRVFDQMDKRDVVSWNSLISSYGVHGFG 360

Query: 191 QDSIWVFGDMVRNG 204
           + +I +F +M  NG
Sbjct: 361 KKAIGIFEEMTYNG 374



 Score = 69.7 bits (169), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 56/222 (25%), Positives = 99/222 (44%), Gaps = 15/222 (6%)

Query: 376 SLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPV--TVSSILSACAQLGAISLGKW 433
           S A  N +I    + G      +L Q ++   + PNP   T   ++ +C    ++   + 
Sbjct: 38  STADNNKLIQSLCKQG------NLTQALELLSLEPNPAQHTYELLILSCTHQNSLLDAQR 91

Query: 434 VHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGH 493
           VH  +    F+ + +++T LI+MY+   +I  AR++FD   +++   +N +     L GH
Sbjct: 92  VHRHLLENGFDQDPFLATKLINMYSFFDSIDNARKVFDKTRNRTIYVYNALFRALSLAGH 151

Query: 494 GLEALQLFSEMLHSGIRPSGVTFLSVLYAC----SHAGLVREGDEIFQSMIHDHGFKPLA 549
           G E L ++  M   GI     T+  VL AC        L+ +G EI  + I  HG+    
Sbjct: 152 GEEVLNMYRRMNSIGIPSDRFTYTYVLKACVASECFVSLLNKGREI-HAHILRHGYDGYV 210

Query: 550 EHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGAC 591
                +VD+  + G +  A      + V+     W A++ AC
Sbjct: 211 HIMTTLVDMYAKFGCVSNASCVFNQMPVK-NVVSWSAMI-AC 250


>gi|357518907|ref|XP_003629742.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355523764|gb|AET04218.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 616

 Score =  412 bits (1058), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 212/578 (36%), Positives = 339/578 (58%), Gaps = 34/578 (5%)

Query: 241 FHDHVYVLTGLVSFYSKCGEVE---RAELLFRDIVRPDLISCNAMISGYTCNGKTESSLR 297
            H   YV+T L+ F +    +       LLF  +  P+    +A+I  Y  NG    S+R
Sbjct: 39  LHQSSYVITNLLRFITTLPHIPVHTYPHLLFSQVHSPNPFLYSALIRAYARNGPFHHSIR 98

Query: 298 LFRQLLASAERVNSSTIVGLIPVF-------------YPFG---HLHLTNCIHSFCLKSG 341
           L+  +L +     S T   L  +              + FG    L++ N I    +K G
Sbjct: 99  LYTSMLNNNVSPVSFTFSALFSLLKNPSLGSQLHLHAFLFGFVNDLYVGNTIIHMYVKFG 158

Query: 342 IVS------------NSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQ 389
           ++             +    T L   Y+R  +M++A +LF     K + +W +M+ GY+Q
Sbjct: 159 VLDCARKVFDEMPHRDVVTWTELIVAYARSGDMDSACELFVGLPVKDMVAWTSMVTGYSQ 218

Query: 390 NGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFES--NI 447
           N + ++A+  F++M+ + V  + +T+   +SACAQLG      W+ E+ +S  F S  N+
Sbjct: 219 NAMPKKALQFFRKMREAGVVTDEITLVGAISACAQLGVSGYADWIREIAESSRFGSGSNV 278

Query: 448 YVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHS 507
           +V +ALIDMY+KCGN+ EA  +F  M   +  ++++MI G+ +HG    A++LF EML +
Sbjct: 279 FVGSALIDMYSKCGNVEEAYNVFKGMKEMNVFSYSSMIVGFAVHGRARSAIKLFYEMLEN 338

Query: 508 GIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEK 567
           GI+P+ VTF+ +  ACSHAG+V +G ++F +M   +G  P A+HYACM D+LGRAG LEK
Sbjct: 339 GIKPNHVTFVGLFTACSHAGMVEQGQQLFGAMKECYGVSPTADHYACMADLLGRAGHLEK 398

Query: 568 ALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSA 627
           AL+ ++ + +EP   VWGALLGA  IH + ++A +AS  LFEL+P+N+G ++LLS  Y+ 
Sbjct: 399 ALQLVQTMPMEPNGGVWGALLGASHIHGNPDVAEIASRSLFELEPDNLGNYLLLSKTYAL 458

Query: 628 ERDYLQAATVRQVVKKRKLAKAPGCTLIEV-GGTPHVFTSGDQLHPQSTAIYAMLEKLNG 686
              +   + VR+++++++L K PGC+ +E   G  H F +GD  HP+   I   L+ L  
Sbjct: 459 AAKWDDVSRVRKLMREKQLRKNPGCSWVEAKNGIIHEFFAGDVKHPEINEIKKALDDLLQ 518

Query: 687 KMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLD 746
           +++  G+Q +  +  +D+++E K  ++  HSEKLA+A+GL++T+ G+ I+I+KNLR+C D
Sbjct: 519 RLKCTGYQPKLNSVPYDIDDEGKRCLLVSHSEKLALAYGLLSTDAGSTIKIMKNLRICED 578

Query: 747 CHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           CH      SK+TGR I+VRD  RFHHF  G CSC ++W
Sbjct: 579 CHIVMCGASKLTGRKIIVRDNMRFHHFLNGACSCNNFW 616



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 92/333 (27%), Positives = 154/333 (46%), Gaps = 41/333 (12%)

Query: 21  TQSQLTQTHAQIIIHGFQNDLSTVTKLAH---RLSDFKATCYARALFFSIPKPDLFLFNV 77
           T +   Q HA I  +        +T L      L       Y   LF  +  P+ FL++ 
Sbjct: 23  TLNHAKQLHAHIYRNNLHQSSYVITNLLRFITTLPHIPVHTYPHLLFSQVHSPNPFLYSA 82

Query: 78  IIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVS 137
           +IR ++ N     SI  YT +  N  ++P +FT+S + S      + S+G  LH HA + 
Sbjct: 83  LIRAYARNGPFHHSIRLYTSMLNNN-VSPVSFTFSALFSLLK---NPSLGSQLHLHAFLF 138

Query: 138 GYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPE-------------------------- 171
           G+ +DL+VG  ++ +Y KF  +  ARKVFD+MP                           
Sbjct: 139 GFVNDLYVGNTIIHMYVKFGVLDCARKVFDEMPHRDVVTWTELIVAYARSGDMDSACELF 198

Query: 172 -----KDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQEL 226
                KD V W SM++G  +N   + ++  F  M R  G   D  ++   + A A++   
Sbjct: 199 VGLPVKDMVAWTSMVTGYSQNAMPKKALQFFRKM-REAGVVTDEITLVGAISACAQLGVS 257

Query: 227 RLGMEIQCLG--LKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMIS 284
                I+ +    + G   +V+V + L+  YSKCG VE A  +F+ +   ++ S ++MI 
Sbjct: 258 GYADWIREIAESSRFGSGSNVFVGSALIDMYSKCGNVEEAYNVFKGMKEMNVFSYSSMIV 317

Query: 285 GYTCNGKTESSLRLFRQLLASAERVNSSTIVGL 317
           G+  +G+  S+++LF ++L +  + N  T VGL
Sbjct: 318 GFAVHGRARSAIKLFYEMLENGIKPNHVTFVGL 350



 Score = 85.9 bits (211), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 78/365 (21%), Positives = 156/365 (42%), Gaps = 41/365 (11%)

Query: 165 VFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAV-AEV 223
           +F ++   +  L++++I    +N  F  SI ++  M+ N     + + V+    A+ + +
Sbjct: 68  LFSQVHSPNPFLYSALIRAYARNGPFHHSIRLYTSMLNN-----NVSPVSFTFSALFSLL 122

Query: 224 QELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMI 283
           +   LG ++       GF + +YV   ++  Y K G ++ A  +F ++   D+++   +I
Sbjct: 123 KNPSLGSQLHLHAFLFGFVNDLYVGNTIIHMYVKFGVLDCARKVFDEMPHRDVVTWTELI 182

Query: 284 SGYTCNGKTES-------------------------------SLRLFRQLLASAERVNSS 312
             Y  +G  +S                               +L+ FR++  +    +  
Sbjct: 183 VAYARSGDMDSACELFVGLPVKDMVAWTSMVTGYSQNAMPKKALQFFRKMREAGVVTDEI 242

Query: 313 TIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVL--TALSTVYSRLNEMEAARKLFD 370
           T+VG I      G     + I      S   S S+V   +AL  +YS+   +E A  +F 
Sbjct: 243 TLVGAISACAQLGVSGYADWIREIAESSRFGSGSNVFVGSALIDMYSKCGNVEEAYNVFK 302

Query: 371 ESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISL 430
              E ++ S+++MI G+  +G    AI LF EM  + + PN VT   + +AC+  G +  
Sbjct: 303 GMKEMNVFSYSSMIVGFAVHGRARSAIKLFYEMLENGIKPNHVTFVGLFTACSHAGMVEQ 362

Query: 431 GKWVHELVKSRNFESNIYVSTA-LIDMYAKCGNIVEARELFDLMSHKSE-VTWNTMISGY 488
           G+ +   +K     S      A + D+  + G++ +A +L   M  +     W  ++   
Sbjct: 363 GQQLFGAMKECYGVSPTADHYACMADLLGRAGHLEKALQLVQTMPMEPNGGVWGALLGAS 422

Query: 489 GLHGH 493
            +HG+
Sbjct: 423 HIHGN 427


>gi|296089800|emb|CBI39619.3| unnamed protein product [Vitis vinifera]
          Length = 640

 Score =  412 bits (1058), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 243/656 (37%), Positives = 355/656 (54%), Gaps = 74/656 (11%)

Query: 135 IVSGYGSDLFVGAALVDLYFK--FSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQD 192
           I++G+ SD F  + L+       F  +  + ++FD++   +  +WN+M+   +++   + 
Sbjct: 53  ILTGFISDTFAASRLLKFSTDSPFIGLDYSLQIFDRIENSNGFMWNTMMRAYIQSNSAEK 112

Query: 193 SIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLV 252
           ++ ++  MV+N     D+ +   V+ A A V+ L  G +          HDHV      V
Sbjct: 113 ALLLYKLMVKNN-VGPDNYTYPLVVQACA-VRLLEFGGK--------EIHDHVLK----V 158

Query: 253 SFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSS 312
            F S                  D+   N +I+ Y   G    + +LF +           
Sbjct: 159 GFDS------------------DVYVQNTLINMYAVCGNMRDARKLFDE----------- 189

Query: 313 TIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDES 372
                                 S  L S  VS +S+L         + ++  A KLF+E 
Sbjct: 190 ----------------------SPVLDS--VSWNSILAGYVK-KGDMGQVMEAWKLFNEM 224

Query: 373 SEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGK 432
            EK + SW+A+I+GY QNG+ EEA+ +F EM A+ +  + V V S+LSACA L  +  GK
Sbjct: 225 DEKDMVSWSALISGYEQNGMYEEALVMFIEMNANGMRLDEVVVVSVLSACAHLSIVKTGK 284

Query: 433 WVHELVKSRNFESNIYVSTALI----DMYAKCGNIVEARELFDLMSHKSEVTWNTMISGY 488
            +H LV     ES + +  ALI    DMY KCG +  A E+F+ M  K   +WN +I G 
Sbjct: 285 MIHGLVIRMGIESYVNLQNALIHMYSDMYMKCGCVENALEVFNGMEEKGVSSWNALIIGL 344

Query: 489 GLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPL 548
            ++G    +L +FSEM ++G+ P+ +TF+ VL AC H GLV EG   F SMI  HG +P 
Sbjct: 345 AVNGLVERSLDMFSEMKNNGVIPNEITFMGVLGACRHMGLVDEGRCHFASMIEKHGIEPN 404

Query: 549 AEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLF 608
            +HY CMVD+LGRAG L +A + I+ + + P  A WGALLGAC  H DT +      KL 
Sbjct: 405 VKHYGCMVDLLGRAGLLNEAEKLIESMPMAPDVATWGALLGACKKHGDTEMGERVGRKLI 464

Query: 609 ELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGD 668
           EL P++ G+HVLLSNI++++ D+     VR ++K++ + K PGC+LIE  G  H F +GD
Sbjct: 465 ELQPDHDGFHVLLSNIFASKGDWEDVLEVRGMMKQQGVVKTPGCSLIEANGVVHEFLAGD 524

Query: 669 QLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIA 728
           + HP    +  ML ++  +++  G+  +T     D++EEEKE  +  HSEKLAIAFGL+ 
Sbjct: 525 KTHPWINKVEGMLNEMAKRLKMEGYAPDTNEVSLDIDEEEKETTLFRHSEKLAIAFGLLT 584

Query: 729 TEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
             P T IRI+KNLR+C DCHTA K ISK   R IVVRD +RFH+FK G CSC DYW
Sbjct: 585 ISPPTPIRIMKNLRICNDCHTAAKLISKAYAREIVVRDRHRFHYFKEGACSCMDYW 640



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 106/413 (25%), Positives = 185/413 (44%), Gaps = 44/413 (10%)

Query: 24  QLTQTHAQIIIHGFQNDLSTVTKLAHRLSD--FKATCYARALFFSIPKPDLFLFNVIIRG 81
           Q  +  +Q+I+ GF +D    ++L    +D  F    Y+  +F  I   + F++N ++R 
Sbjct: 44  QFNRILSQMILTGFISDTFAASRLLKFSTDSPFIGLDYSLQIFDRIENSNGFMWNTMMRA 103

Query: 82  FSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGS 141
           +  +   + ++  Y  + KN  + PDN+TY  V+ A +       G  +H H +  G+ S
Sbjct: 104 YIQSNSAEKALLLYKLMVKNN-VGPDNYTYPLVVQACAVRLLEFGGKEIHDHVLKVGFDS 162

Query: 142 DLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNS---------------------- 179
           D++V   L+++Y     ++ ARK+FD+ P  D+V WNS                      
Sbjct: 163 DVYVQNTLINMYAVCGNMRDARKLFDESPVLDSVSWNSILAGYVKKGDMGQVMEAWKLFN 222

Query: 180 ------------MISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELR 227
                       +ISG  +N  +++++ +F +M  N G  LD   V +VL A A +  ++
Sbjct: 223 EMDEKDMVSWSALISGYEQNGMYEEALVMFIEMNAN-GMRLDEVVVVSVLSACAHLSIVK 281

Query: 228 LGMEIQCLGLKLGFHDHVYVLTGLVSFYS----KCGEVERAELLFRDIVRPDLISCNAMI 283
            G  I  L +++G   +V +   L+  YS    KCG VE A  +F  +    + S NA+I
Sbjct: 282 TGKMIHGLVIRMGIESYVNLQNALIHMYSDMYMKCGCVENALEVFNGMEEKGVSSWNALI 341

Query: 284 SGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNC-IHSFCLKSGI 342
            G   NG  E SL +F ++  +    N  T +G++      G +    C   S   K GI
Sbjct: 342 IGLAVNGLVERSLDMFSEMKNNGVIPNEITFMGVLGACRHMGLVDEGRCHFASMIEKHGI 401

Query: 343 VSNSSVLTALSTVYSRLNEMEAARKLFDE-SSEKSLASWNAMIAGYTQNGLTE 394
             N      +  +  R   +  A KL +       +A+W A++    ++G TE
Sbjct: 402 EPNVKHYGCMVDLLGRAGLLNEAEKLIESMPMAPDVATWGALLGACKKHGDTE 454



 Score =  116 bits (290), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 98/328 (29%), Positives = 147/328 (44%), Gaps = 65/328 (19%)

Query: 319 PVFYPFGHL-----HLTNC--------IHSFCLKSGIVSNS---SVLTALSTVYSRLNEM 362
           P F P   L     HL NC        I S  + +G +S++   S L   ST  S    +
Sbjct: 21  PTFKPTITLSILETHLHNCHNLKQFNRILSQMILTGFISDTFAASRLLKFST-DSPFIGL 79

Query: 363 EAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSAC 422
           + + ++FD     +   WN M+  Y Q+   E+A+ L++ M  + V P+  T   ++ AC
Sbjct: 80  DYSLQIFDRIENSNGFMWNTMMRAYIQSNSAEKALLLYKLMVKNNVGPDNYTYPLVVQAC 139

Query: 423 AQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFD----------- 471
           A       GK +H+ V    F+S++YV   LI+MYA CGN+ +AR+LFD           
Sbjct: 140 AVRLLEFGGKEIHDHVLKVGFDSDVYVQNTLINMYAVCGNMRDARKLFDESPVLDSVSWN 199

Query: 472 -----------------------LMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSG 508
                                   M  K  V+W+ +ISGY  +G   EAL +F EM  +G
Sbjct: 200 SILAGYVKKGDMGQVMEAWKLFNEMDEKDMVSWSALISGYEQNGMYEEALVMFIEMNANG 259

Query: 509 IRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACM--------VDILG 560
           +R   V  +SVL AC+H  +V+ G      MIH    +   E Y  +         D+  
Sbjct: 260 MRLDEVVVVSVLSACAHLSIVKTG-----KMIHGLVIRMGIESYVNLQNALIHMYSDMYM 314

Query: 561 RAGQLEKALEFIKGLAVEPGPAVWGALL 588
           + G +E ALE   G+  E G + W AL+
Sbjct: 315 KCGCVENALEVFNGME-EKGVSSWNALI 341


>gi|296083798|emb|CBI24015.3| unnamed protein product [Vitis vinifera]
          Length = 569

 Score =  412 bits (1058), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 202/454 (44%), Positives = 283/454 (62%), Gaps = 2/454 (0%)

Query: 333 IHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDE--SSEKSLASWNAMIAGYTQN 390
           IH+  LK G  ++   L  L  +Y     +E AR++FD     +++  SWNAMIA Y Q+
Sbjct: 116 IHAHVLKFGFGADGFSLNNLIHMYVNFQSLEQARRVFDNMPQRDRNSVSWNAMIAAYVQS 175

Query: 391 GLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVS 450
               EA +LF  M+   V  +    +S+LSAC  LGA+  GKW+H  ++    E +  ++
Sbjct: 176 NRLHEAFALFDRMRLENVVLDKFVAASMLSACTGLGALEQGKWIHGYIEKSGIELDSKLA 235

Query: 451 TALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIR 510
           T +IDMY KCG + +A E+F+ +  K   +WN MI G  +HG G  A++LF EM    + 
Sbjct: 236 TTVIDMYCKCGCLEKASEVFNELPQKGISSWNCMIGGLAMHGKGEAAIELFKEMEREMVA 295

Query: 511 PSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALE 570
           P G+TF++VL AC+H+GLV EG   FQ M    G KP  EH+ CMVD+LGRAG LE+A +
Sbjct: 296 PDGITFVNVLSACAHSGLVEEGKHYFQYMTEVLGLKPGMEHFGCMVDLLGRAGLLEEARK 355

Query: 571 FIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERD 630
            I  + V P   V GAL+GAC IH +T L     +K+ EL+P N G +VLL+N+Y++   
Sbjct: 356 LINEMPVNPDAGVLGALVGACRIHGNTELGEQIGKKVIELEPHNSGRYVLLANLYASAGR 415

Query: 631 YLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMRE 690
           +   A VR+++  R + KAPG ++IE       F +G + HPQ+  IYA L+++   +R 
Sbjct: 416 WEDVAKVRKLMNDRGVKKAPGFSMIESESGVDEFIAGGRAHPQAKEIYAKLDEILETIRS 475

Query: 691 AGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTA 750
            G+  +T   LHD++EEEKE  +  HSEKLAIAFGL+ T+PG  +RI KNLR+C DCH A
Sbjct: 476 IGYVPDTDGVLHDIDEEEKENPLYYHSEKLAIAFGLLKTKPGETLRISKNLRICRDCHQA 535

Query: 751 TKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           +K ISKV  R I++RD NRFHHF+ G CSC DYW
Sbjct: 536 SKLISKVYDREIIIRDRNRFHHFRMGGCSCKDYW 569



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 130/550 (23%), Positives = 232/550 (42%), Gaps = 88/550 (16%)

Query: 2   SMKTPQSRNLFLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYAR 61
           S+ + ++  L L  L    T ++L Q H+QII  G   D   + ++              
Sbjct: 13  SLSSAKAHKLPLYGLDSCSTMAELKQYHSQIIRLGLSADNDAMGRVIK------------ 60

Query: 62  ALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASAC 121
             F +I K           G+   ++ ++ I  Y+ +  + +++P+ FTY  ++ A   C
Sbjct: 61  --FCAISKS----------GYLRWQLARNCIFMYSRML-HKSVSPNKFTYPPLIRAC--C 105

Query: 122 CDRSI--GVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKD--TVLW 177
            D +I  G  +H H +  G+G+D F    L+ +Y  F  ++ AR+VFD MP++D  +V W
Sbjct: 106 IDYAIEEGKQIHAHVLKFGFGADGFSLNNLIHMYVNFQSLEQARRVFDNMPQRDRNSVSW 165

Query: 178 NSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGL 237
           N+MI+  +++    ++  +F D +R     LD    A++L A   +  L  G  I     
Sbjct: 166 NAMIAAYVQSNRLHEAFALF-DRMRLENVVLDKFVAASMLSACTGLGALEQGKWIHGYIE 224

Query: 238 KLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLR 297
           K G      + T ++  Y KCG +E+A  +F ++ +  + S N MI G   +GK E+++ 
Sbjct: 225 KSGIELDSKLATTVIDMYCKCGCLEKASEVFNELPQKGISSWNCMIGGLAMHGKGEAAIE 284

Query: 298 LFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYS 357
           LF+++       +  T V +           L+ C HS  ++ G          ++ V  
Sbjct: 285 LFKEMEREMVAPDGITFVNV-----------LSACAHSGLVEEG----KHYFQYMTEVLG 329

Query: 358 RLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSS 417
               ME                +  M+    + GL EEA  L  EM    V P+   + +
Sbjct: 330 LKPGME---------------HFGCMVDLLGRAGLLEEARKLINEM---PVNPDAGVLGA 371

Query: 418 ILSACAQLGAISLGKWV-HELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHK 476
           ++ AC   G   LG+ +  ++++     S  YV   L ++YA  G   +  ++  LM+ +
Sbjct: 372 LVGACRIHGNTELGEQIGKKVIELEPHNSGRYV--LLANLYASAGRWEDVAKVRKLMNDR 429

Query: 477 ------------SEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACS 524
                       SE   +  I+G   H    E      E+L         T  S+ Y   
Sbjct: 430 GVKKAPGFSMIESESGVDEFIAGGRAHPQAKEIYAKLDEILE--------TIRSIGYVPD 481

Query: 525 HAGLVREGDE 534
             G++ + DE
Sbjct: 482 TDGVLHDIDE 491


>gi|15240085|ref|NP_196272.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75170345|sp|Q9FG16.1|PP367_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g06540
 gi|10178110|dbj|BAB11403.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|332003649|gb|AED91032.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 622

 Score =  412 bits (1058), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 197/436 (45%), Positives = 290/436 (66%), Gaps = 1/436 (0%)

Query: 350 TALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVA 409
           T++   Y +   +E AR++FDE   ++L +W+ MI GY +N   E+AI LF+ M+   V 
Sbjct: 187 TSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVV 246

Query: 410 PNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEAREL 469
            N   + S++S+CA LGA+  G+  +E V   +   N+ + TAL+DM+ +CG+I +A  +
Sbjct: 247 ANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHV 306

Query: 470 FDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLV 529
           F+ +     ++W+++I G  +HGH  +A+  FS+M+  G  P  VTF +VL ACSH GLV
Sbjct: 307 FEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLV 366

Query: 530 REGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLG 589
            +G EI+++M  DHG +P  EHY C+VD+LGRAG+L +A  FI  + V+P   + GALLG
Sbjct: 367 EKGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLG 426

Query: 590 ACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKA 649
           AC I+K+T +A      L ++ PE+ GY+VLLSNIY+    + +  ++R ++K++ + K 
Sbjct: 427 ACKIYKNTEVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKKP 486

Query: 650 PGCTLIEVGGTPHVFTSG-DQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEE 708
           PG +LIE+ G  + FT G DQ HP+   I    E++ GK+R  G++  T  A  DV+EEE
Sbjct: 487 PGWSLIEIDGKINKFTMGDDQKHPEMGKIRRKWEEILGKIRLIGYKGNTGDAFFDVDEEE 546

Query: 709 KELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDAN 768
           KE  + +HSEKLAIA+G++ T+PGT IRI+KNLRVC DCHT TK IS+V GR ++VRD N
Sbjct: 547 KESSIHMHSEKLAIAYGMMKTKPGTTIRIVKNLRVCEDCHTVTKLISEVYGRELIVRDRN 606

Query: 769 RFHHFKGGVCSCGDYW 784
           RFHHF+ GVCSC DYW
Sbjct: 607 RFHHFRNGVCSCRDYW 622



 Score =  125 bits (315), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 125/509 (24%), Positives = 217/509 (42%), Gaps = 88/509 (17%)

Query: 13  LSLLKGAKTQSQLTQTHAQIIIHGF--QNDLSTVTKLAHRL-------SDFKATC----Y 59
           L+LL+   + S L       IIHGF  +  L +   +A RL       S F        Y
Sbjct: 16  LALLQSCSSFSDLK------IIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGY 69

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           A  +F  I  P+LF+FN++IR FS    P  +  FYT + K + + PDN T+ F++ A+S
Sbjct: 70  AYGIFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLK-SRIWPDNITFPFLIKASS 128

Query: 120 ACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNS 179
                 +G   H   +  G+ +D++V  +LV +Y    ++ +A ++F +M  +D V W S
Sbjct: 129 EMECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTS 188

Query: 180 -------------------------------MISGLMKNCCFQDSIWVFGDMVRNGGTWL 208
                                          MI+G  KN CF+ +I +F  M R  G   
Sbjct: 189 MVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKRE-GVVA 247

Query: 209 DSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLF 268
           + T + +V+ + A +  L  G       +K     ++ + T LV  + +CG++E+A  +F
Sbjct: 248 NETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVF 307

Query: 269 RDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLH 328
             +   D +S +++I G   +G    ++  F Q+++          +G IP    F  + 
Sbjct: 308 EGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMIS----------LGFIPRDVTFTAV- 356

Query: 329 LTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYT 388
           L+ C H   ++ G+            +Y  + +        D   E  L  +  ++    
Sbjct: 357 LSACSHGGLVEKGL-----------EIYENMKK--------DHGIEPRLEHYGCIVDMLG 397

Query: 389 QNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWV-HELVKSRNFESNI 447
           + G   EA +   +M    V PN   + ++L AC       + + V + L+K +   S  
Sbjct: 398 RAGKLAEAENFILKMH---VKPNAPILGALLGACKIYKNTEVAERVGNMLIKVKPEHSGY 454

Query: 448 YVSTALIDMYAKCGNIVEARELFDLMSHK 476
           YV   L ++YA  G   +   L D+M  K
Sbjct: 455 YV--LLSNIYACAGQWDKIESLRDMMKEK 481



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 80/330 (24%), Positives = 152/330 (46%), Gaps = 42/330 (12%)

Query: 333 IHSFCLKSGIVSN---SSVLTAL----STVYSRLNEMEAARKLFDESSEKSLASWNAMIA 385
           IH F L++ ++S+   +S L AL    ST     N +  A  +F +    +L  +N +I 
Sbjct: 31  IHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYGIFSQIQNPNLFVFNLLIR 90

Query: 386 GYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFES 445
            ++      +A   + +M  S++ P+ +T   ++ A +++  + +G+  H  +    F++
Sbjct: 91  CFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVLVGEQTHSQIVRFGFQN 150

Query: 446 NIYVSTALIDMYA-------------------------------KCGNIVEARELFDLMS 474
           ++YV  +L+ MYA                               KCG +  ARE+FD M 
Sbjct: 151 DVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCKCGMVENAREMFDEMP 210

Query: 475 HKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDE 534
           H++  TW+ MI+GY  +    +A+ LF  M   G+  +    +SV+ +C+H G +  G+ 
Sbjct: 211 HRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSVISSCAHLGALEFGER 270

Query: 535 IFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIH 594
            ++ ++  H    L    A +VD+  R G +EKA+   +GL  E     W +++    +H
Sbjct: 271 AYEYVVKSHMTVNLILGTA-LVDMFWRCGDIEKAIHVFEGLP-ETDSLSWSSIIKGLAVH 328

Query: 595 KDTNLARVASEKLFELD--PENVGYHVLLS 622
              + A     ++  L   P +V +  +LS
Sbjct: 329 GHAHKAMHYFSQMISLGFIPRDVTFTAVLS 358


>gi|302800064|ref|XP_002981790.1| hypothetical protein SELMODRAFT_444974 [Selaginella moellendorffii]
 gi|300150622|gb|EFJ17272.1| hypothetical protein SELMODRAFT_444974 [Selaginella moellendorffii]
          Length = 611

 Score =  412 bits (1058), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 230/606 (37%), Positives = 354/606 (58%), Gaps = 9/606 (1%)

Query: 187 NCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRL--GMEIQCLGLKLGFHDH 244
           N C  +++  F  M ++G    D  + + +L A+A++    +  G EI       G   +
Sbjct: 7   NGCHSEALVFFRRMYQSGER-PDRVTFSVILAAIAQMGAAAIDQGREIHRYARISGLLPN 65

Query: 245 VYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLL- 303
           V V T ++S Y KCG ++ A   F ++   + ++ NAM++ Y  +G+   +L LFR++  
Sbjct: 66  VVVGTAVISMYGKCGRLDDARAAFEELQWKNSVTWNAMMTNYKLDGRDREALELFREMCE 125

Query: 304 -ASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVL--TALSTVYSRLN 360
            + + R +  +    I        L     IH    + G   +  V+  TAL  +YS+  
Sbjct: 126 RSRSARPDKFSFSIAIEACSNLEDLEQGREIHEMLRREGKELHKDVVVGTALLNMYSKCG 185

Query: 361 EMEAARKLFDE-SSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQ-ASKVAPNPVTVSSI 418
           ++E ARK+FD    +     WNAMIA Y Q+G  ++A+ L++ M   + +AP   T  ++
Sbjct: 186 DLEEARKVFDSIRHDADSVCWNAMIAAYAQHGRGKQALDLYRSMHDTTDLAPKQGTFVTV 245

Query: 419 LSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSE 478
           +  CA+L A+  G+ +H  V++ NF++N+ VS AL+ MY KCG + EA ++F  M  K E
Sbjct: 246 IDVCAELSALKQGRAIHARVRATNFDANLLVSNALVHMYGKCGCLDEALDVFHSMKLKDE 305

Query: 479 VTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQS 538
           ++WNT+IS Y  HGH  +AL L+ EM   G++P+ VTF+ +L ACSH GLV +G + F  
Sbjct: 306 ISWNTIISSYAYHGHSDQALLLYQEMDLQGVKPTEVTFVGLLSACSHGGLVADGLDYFYR 365

Query: 539 MIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTN 598
           M  DH  KP   H+ C++D+LGR G+L +A   +K + ++     W +LLGAC  H D  
Sbjct: 366 MQDDHRIKPSVPHFGCIIDLLGRGGRLAEAELVLKSMPIQANAVQWMSLLGACKTHGDLK 425

Query: 599 LARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVG 658
               A++++ +  P   G +VLLSNIY+A   +     +R+++  R + K+PG + IE+G
Sbjct: 426 RGVRAADQVVDRVPWTSGGYVLLSNIYAAAGRWKDVEKIRKIMAARGVKKSPGKSWIEIG 485

Query: 659 GTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSE 718
              H F SGD+ HPQ   IY  L K+  +M+  G+  +T +  HD+EEEEKE ++  HSE
Sbjct: 486 DVVHEFVSGDRSHPQGEEIYVELGKMVEEMKGLGYVPDTSSVFHDLEEEEKEDLLVCHSE 545

Query: 719 KLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVC 778
           KLAI +G +     + +RI+KNLRVCLDCHTATKF+S++TGR IVVRDA RFH F+ G C
Sbjct: 546 KLAIVYGNMVVPGKSMLRIVKNLRVCLDCHTATKFMSRITGRKIVVRDAARFHLFENGSC 605

Query: 779 SCGDYW 784
           SC DYW
Sbjct: 606 SCRDYW 611



 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 122/469 (26%), Positives = 229/469 (48%), Gaps = 15/469 (3%)

Query: 82  FSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSI--GVLLHGHAIVSGY 139
           FS+N     ++ F+  + + +   PD  T+S +L+A +     +I  G  +H +A +SG 
Sbjct: 4   FSHNGCHSEALVFFRRMYQ-SGERPDRVTFSVILAAIAQMGAAAIDQGREIHRYARISGL 62

Query: 140 GSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGD 199
             ++ VG A++ +Y K   +  AR  F+++  K++V WN+M++    +   ++++ +F +
Sbjct: 63  LPNVVVGTAVISMYGKCGRLDDARAAFEELQWKNSVTWNAMMTNYKLDGRDREALELFRE 122

Query: 200 MV-RNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLG--FHDHVYVLTGLVSFYS 256
           M  R+     D  S +  + A + +++L  G EI  +  + G   H  V V T L++ YS
Sbjct: 123 MCERSRSARPDKFSFSIAIEACSNLEDLEQGREIHEMLRREGKELHKDVVVGTALLNMYS 182

Query: 257 KCGEVERAELLFRDIVRPDLISC--NAMISGYTCNGKTESSLRLFRQLLASAERV-NSST 313
           KCG++E A  +F D +R D  S   NAMI+ Y  +G+ + +L L+R +  + +      T
Sbjct: 183 KCGDLEEARKVF-DSIRHDADSVCWNAMIAAYAQHGRGKQALDLYRSMHDTTDLAPKQGT 241

Query: 314 IVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESS 373
            V +I V      L     IH+    +   +N  V  AL  +Y +   ++ A  +F    
Sbjct: 242 FVTVIDVCAELSALKQGRAIHARVRATNFDANLLVSNALVHMYGKCGCLDEALDVFHSMK 301

Query: 374 EKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLG-K 432
            K   SWN +I+ Y  +G +++A+ L+QEM    V P  VT   +LSAC+  G ++ G  
Sbjct: 302 LKDEISWNTIISSYAYHGHSDQALLLYQEMDLQGVKPTEVTFVGLLSACSHGGLVADGLD 361

Query: 433 WVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMS-HKSEVTWNTMISGYGLH 491
           + + +      + ++     +ID+  + G + EA  +   M    + V W +++     H
Sbjct: 362 YFYRMQDDHRIKPSVPHFGCIIDLLGRGGRLAEAELVLKSMPIQANAVQWMSLLGACKTH 421

Query: 492 GHGLEALQLFSEMLHSGIRPS-GVTFLSVLYACSHAGLVREGDEIFQSM 539
           G     ++   +++      S G   LS +YA   AG  ++ ++I + M
Sbjct: 422 GDLKRGVRAADQVVDRVPWTSGGYVLLSNIYAA--AGRWKDVEKIRKIM 468



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 70/218 (32%), Positives = 109/218 (50%), Gaps = 9/218 (4%)

Query: 384 IAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACA--QLGAISLGKWVHELVKSR 441
           +A ++ NG   EA+  F+ M  S   P+ VT S IL+A A     AI  G+ +H   +  
Sbjct: 1   MAAFSHNGCHSEALVFFRRMYQSGERPDRVTFSVILAAIAQMGAAAIDQGREIHRYARIS 60

Query: 442 NFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLF 501
               N+ V TA+I MY KCG + +AR  F+ +  K+ VTWN M++ Y L G   EAL+LF
Sbjct: 61  GLLPNVVVGTAVISMYGKCGRLDDARAAFEELQWKNSVTWNAMMTNYKLDGRDREALELF 120

Query: 502 SEMLH--SGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHY---ACMV 556
            EM       RP   +F   + ACS+   + +G EI + M+   G K L +       ++
Sbjct: 121 REMCERSRSARPDKFSFSIAIEACSNLEDLEQGREIHE-MLRREG-KELHKDVVVGTALL 178

Query: 557 DILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIH 594
           ++  + G LE+A +    +  +     W A++ A   H
Sbjct: 179 NMYSKCGDLEEARKVFDSIRHDADSVCWNAMIAAYAQH 216



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/124 (27%), Positives = 56/124 (45%), Gaps = 1/124 (0%)

Query: 60  ARALFFSIP-KPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAA 118
           AR +F SI    D   +N +I  ++ +   K ++  Y  +   T L P   T+  V+   
Sbjct: 190 ARKVFDSIRHDADSVCWNAMIAAYAQHGRGKQALDLYRSMHDTTDLAPKQGTFVTVIDVC 249

Query: 119 SACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWN 178
           +       G  +H     + + ++L V  ALV +Y K   +  A  VF  M  KD + WN
Sbjct: 250 AELSALKQGRAIHARVRATNFDANLLVSNALVHMYGKCGCLDEALDVFHSMKLKDEISWN 309

Query: 179 SMIS 182
           ++IS
Sbjct: 310 TIIS 313


>gi|297735590|emb|CBI18084.3| unnamed protein product [Vitis vinifera]
          Length = 496

 Score =  412 bits (1058), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 207/458 (45%), Positives = 279/458 (60%), Gaps = 12/458 (2%)

Query: 339 KSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAIS 398
           + G+  ++ +L  +       ++    R LF +  + ++  WN MI G   N   ++AI 
Sbjct: 39  RFGLCHDNYLLNMILRCSFDFSDTNYTRFLFHQIKQPNIFLWNTMIRGLVSNDCFDDAIE 98

Query: 399 LFQEMQASKVAPNPVTVSSILSACAQLGAISLG---------KWVHELVKSRNFESNIYV 449
            +  M++    PN  T   +L ACA+L  + LG         +W+H+ +       N++V
Sbjct: 99  FYGLMRSEGFLPNNFTFPFVLKACARLLDLQLGVKIHTLVVKEWIHKCIMEMGMVRNVFV 158

Query: 450 STALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHS-- 507
            T+L+DMYAKCGN+ +AR +FD M  K  V+W  MI GY L+G   EA+ LF +M     
Sbjct: 159 GTSLVDMYAKCGNMEKARSVFDGMPEKDIVSWGAMIQGYALNGLPKEAIDLFLQMQRENK 218

Query: 508 -GIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLE 566
            GI+P G TF+ +L  C+HAGLV EG   F SM       P  EHY CMVD+LGRAG L+
Sbjct: 219 LGIKPDGNTFIGLLCGCTHAGLVDEGRRYFNSMYRFFSLTPSIEHYGCMVDLLGRAGLLD 278

Query: 567 KALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYS 626
           +A + I+ + +E    VWGALLGAC IH+DT LA +A ++L EL+P N G +VLLSNIYS
Sbjct: 279 EAHQLIRNMPMEANAIVWGALLGACRIHRDTQLAELALKQLIELEPWNSGNYVLLSNIYS 338

Query: 627 AERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNG 686
           A   + +AA VR  + ++++ K PGC+ IEV G  H F  GD+ HP S  IYA L++L  
Sbjct: 339 ANLKWDEAAKVRLSMNEKRIQKPPGCSWIEVDGIVHEFLVGDKYHPLSEKIYAKLDELTK 398

Query: 687 KMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLD 746
           KM+ AG+   T   L D+EEEEKE  +  HSEKLAIAFGLI+  P   IR++KNLRVC D
Sbjct: 399 KMKVAGYVPTTDFVLFDIEEEEKEHFLGCHSEKLAIAFGLISATPTAVIRVVKNLRVCGD 458

Query: 747 CHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           CH A K IS +TGR I VRD NRFH F+ G CSC DYW
Sbjct: 459 CHMAIKLISSITGREITVRDNNRFHCFREGSCSCNDYW 496



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 62/159 (38%), Positives = 88/159 (55%), Gaps = 10/159 (6%)

Query: 53  DFKATCYARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYS 112
           DF  T Y R LF  I +P++FL+N +IRG  +N+    +I FY  +R    L P+NFT+ 
Sbjct: 58  DFSDTNYTRFLFHQIKQPNIFLWNTMIRGLVSNDCFDDAIEFYGLMRSEGFL-PNNFTFP 116

Query: 113 FVLSAASACCDRSIGVLLHGHAIVS---------GYGSDLFVGAALVDLYFKFSWVKSAR 163
           FVL A +   D  +GV +H   +           G   ++FVG +LVD+Y K   ++ AR
Sbjct: 117 FVLKACARLLDLQLGVKIHTLVVKEWIHKCIMEMGMVRNVFVGTSLVDMYAKCGNMEKAR 176

Query: 164 KVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVR 202
            VFD MPEKD V W +MI G   N   +++I +F  M R
Sbjct: 177 SVFDGMPEKDIVSWGAMIQGYALNGLPKEAIDLFLQMQR 215



 Score =  103 bits (256), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 89/326 (27%), Positives = 149/326 (45%), Gaps = 54/326 (16%)

Query: 154 FKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSV 213
           F FS     R +F ++ + +  LWN+MI GL+ N CF D+I  +G ++R+ G   ++ + 
Sbjct: 57  FDFSDTNYTRFLFHQIKQPNIFLWNTMIRGLVSNDCFDDAIEFYG-LMRSEGFLPNNFTF 115

Query: 214 AAVLPAVAEVQELRLGMEIQCLGLK---------LGFHDHVYVLTGLVSFYSKCGEVERA 264
             VL A A + +L+LG++I  L +K         +G   +V+V T LV  Y+KCG +E+A
Sbjct: 116 PFVLKACARLLDLQLGVKIHTLVVKEWIHKCIMEMGMVRNVFVGTSLVDMYAKCGNMEKA 175

Query: 265 ELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAE---RVNSSTIVGLIPVF 321
             +F  +   D++S  AMI GY  NG  + ++ LF Q+    +   + + +T +GL    
Sbjct: 176 RSVFDGMPEKDIVSWGAMIQGYALNGLPKEAIDLFLQMQRENKLGIKPDGNTFIGL---- 231

Query: 322 YPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWN 381
                  L  C H+  +  G    +S+    S                      S+  + 
Sbjct: 232 -------LCGCTHAGLVDEGRRYFNSMYRFFSLT-------------------PSIEHYG 265

Query: 382 AMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSAC-----AQLGAISLGKWVH- 435
            M+    + GL +EA  L + M    +  N +   ++L AC      QL  ++L + +  
Sbjct: 266 CMVDLLGRAGLLDEAHQLIRNM---PMEANAIVWGALLGACRIHRDTQLAELALKQLIEL 322

Query: 436 ELVKSRNFE--SNIYVSTALIDMYAK 459
           E   S N+   SNIY +    D  AK
Sbjct: 323 EPWNSGNYVLLSNIYSANLKWDEAAK 348


>gi|15231358|ref|NP_187990.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75273354|sp|Q9LIC3.1|PP227_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g13770, mitochondrial; Flags: Precursor
 gi|9294022|dbj|BAB01925.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|332641888|gb|AEE75409.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 628

 Score =  411 bits (1057), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 214/572 (37%), Positives = 335/572 (58%), Gaps = 2/572 (0%)

Query: 215 AVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRP 274
           A+L A  + + LR G  +    +K  +    Y+ T L+ FY KC  +E A  +  ++   
Sbjct: 57  ALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEK 116

Query: 275 DLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIH 334
           +++S  AMIS Y+  G +  +L +F +++ S  + N  T   ++        L L   IH
Sbjct: 117 NVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIH 176

Query: 335 SFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTE 394
              +K    S+  V ++L  +Y++  +++ AR++F+   E+ + S  A+IAGY Q GL E
Sbjct: 177 GLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDE 236

Query: 395 EAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALI 454
           EA+ +F  + +  ++PN VT +S+L+A + L  +  GK  H  V  R       +  +LI
Sbjct: 237 EALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLI 296

Query: 455 DMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEML-HSGIRPSG 513
           DMY+KCGN+  AR LFD M  ++ ++WN M+ GY  HG G E L+LF  M     ++P  
Sbjct: 297 DMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDA 356

Query: 514 VTFLSVLYACSHAGLVREGDEIFQSMIH-DHGFKPLAEHYACMVDILGRAGQLEKALEFI 572
           VT L+VL  CSH  +   G  IF  M+  ++G KP  EHY C+VD+LGRAG++++A EFI
Sbjct: 357 VTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFI 416

Query: 573 KGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYL 632
           K +  +P   V G+LLGAC +H   ++      +L E++PEN G +V+LSN+Y++   + 
Sbjct: 417 KRMPSKPTAGVLGSLLGACRVHLSVDIGESVGRRLIEIEPENAGNYVILSNLYASAGRWA 476

Query: 633 QAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAG 692
               VR ++ ++ + K PG + I+   T H F + D+ HP+   + A +++++ KM++AG
Sbjct: 477 DVNNVRAMMMQKAVTKEPGRSWIQHEQTLHYFHANDRTHPRREEVLAKMKEISIKMKQAG 536

Query: 693 FQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATK 752
           +  +    L+DV+EE+KE M+  HSEKLA+ FGLIAT  G  IR+ KNLR+C+DCH   K
Sbjct: 537 YVPDLSCVLYDVDEEQKEKMLLGHSEKLALTFGLIATGEGIPIRVFKNLRICVDCHNFAK 596

Query: 753 FISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
             SKV  R + +RD NRFH    G+CSCGDYW
Sbjct: 597 IFSKVFEREVSLRDKNRFHQIVDGICSCGDYW 628



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 115/420 (27%), Positives = 201/420 (47%), Gaps = 18/420 (4%)

Query: 74  LFNVIIRGFSNNE--------MPKSSICFYTHLRK---NTALTPDNFTYSFVLSAASACC 122
           L  +I R FS++         +P S +C    L++     A+      +    +  +AC 
Sbjct: 4   LMRLIHRSFSSSPTNYVLQTILPISQLCSNGRLQEALLEMAMLGPEMGFHGYDALLNACL 63

Query: 123 DRSI---GVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNS 179
           D+     G  +H H I + Y    ++   L+  Y K   ++ ARKV D+MPEK+ V W +
Sbjct: 64  DKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTA 123

Query: 180 MISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKL 239
           MIS   +     +++ VF +M+R+ G   +  + A VL +      L LG +I  L +K 
Sbjct: 124 MISRYSQTGHSSEALTVFAEMMRSDGK-PNEFTFATVLTSCIRASGLGLGKQIHGLIVKW 182

Query: 240 GFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLF 299
            +  H++V + L+  Y+K G+++ A  +F  +   D++SC A+I+GY   G  E +L +F
Sbjct: 183 NYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMF 242

Query: 300 RQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRL 359
            +L +     N  T   L+        L      H   L+  +   + +  +L  +YS+ 
Sbjct: 243 HRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKC 302

Query: 360 NEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASK-VAPNPVTVSSI 418
             +  AR+LFD   E++  SWNAM+ GY+++GL  E + LF+ M+  K V P+ VT+ ++
Sbjct: 303 GNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAV 362

Query: 419 LSACAQLGAISLGKWVHELVKSRNFESNIYVS--TALIDMYAKCGNIVEARELFDLMSHK 476
           LS C+       G  + + + +  + +         ++DM  + G I EA E    M  K
Sbjct: 363 LSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSK 422



 Score = 43.9 bits (102), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 47/241 (19%), Positives = 90/241 (37%), Gaps = 34/241 (14%)

Query: 12  FLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATC----YARALFFSI 67
            L+ L G        Q H  ++    + +L     L + L D  + C    YAR LF ++
Sbjct: 260 LLTALSGLALLDHGKQAHCHVL----RRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNM 315

Query: 68  PKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIG 127
           P+     +N ++ G+S + + +  +  +  +R    + PD  T   VLS  S       G
Sbjct: 316 PERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTG 375

Query: 128 VLLHGHAIVSGYGSDLFVG--AALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLM 185
           + +    +   YG+         +VD+  +   +  A +   +MP K T     ++  L+
Sbjct: 376 LNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTA---GVLGSLL 432

Query: 186 KNCCFQDSI---------------------WVFGDMVRNGGTWLDSTSVAAVLPAVAEVQ 224
             C    S+                      +  ++  + G W D  +V A++   A  +
Sbjct: 433 GACRVHLSVDIGESVGRRLIEIEPENAGNYVILSNLYASAGRWADVNNVRAMMMQKAVTK 492

Query: 225 E 225
           E
Sbjct: 493 E 493


>gi|357151953|ref|XP_003575959.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g14850-like [Brachypodium distachyon]
          Length = 689

 Score =  411 bits (1057), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 239/648 (36%), Positives = 361/648 (55%), Gaps = 3/648 (0%)

Query: 140 GSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGD 199
           G   F+ A LV+LY K     +A       P    V + + ISG  ++     ++  F  
Sbjct: 42  GLPPFICAHLVNLYSKLDLPAAAASALASDPNPTVVSFTAFISGAAQHARPLAALSAFAA 101

Query: 200 MVRNGGTWLDSTSVAAV-LPAVAEVQELRLGMEIQCLGLKLGF-HDHVYVLTGLVSFYSK 257
           M+R G    D T  +A    A A  +   +G +I  L L+ G+     +V    +  Y K
Sbjct: 102 MLRVGLRPNDFTFPSAFKAAACAPPRCSTVGPQIHALALRFGYLPGDPFVSCAAMDMYFK 161

Query: 258 CGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGL 317
            G +  A  LF ++   ++I+ NA+++    +G+   + + +  L  +    N  ++   
Sbjct: 162 TGCLGLARRLFEEMPNRNVIAWNAVMTNAVIDGRPLETFKAYFGLREAGGMPNVVSVCAF 221

Query: 318 IPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSL 377
                    L L    H F +  G   + SV  A+   Y +      AR +FD    ++ 
Sbjct: 222 FNACAGAMFLSLGEQFHGFVVTCGFDMDVSVSNAMVDFYGKCRCAGKARAVFDGMRVRNS 281

Query: 378 ASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHEL 437
            SW +MI  Y Q+G  E+A++++   + +   P    VSS+L+ CA L  ++ G+ +H +
Sbjct: 282 VSWCSMIVAYAQHGAEEDALAVYMGARNTGEEPTDFMVSSVLTTCAGLLGLNFGRALHAV 341

Query: 438 VKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEA 497
                 ++NI+V++AL+DMY KCG + +A ++F  M  ++ VTWN MI GY   G    A
Sbjct: 342 AVRSCIDANIFVASALVDMYGKCGGVEDAEQVFLDMPERNLVTWNAMIGGYAHIGDAQNA 401

Query: 498 LQLFSEMLHSG-IRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMV 556
           L +F  M+ SG   P+ +T ++V+ ACS  GL ++G E+F +M    G +P  EHYAC+V
Sbjct: 402 LAVFDAMIRSGGTSPNHITLVNVITACSRGGLTKDGYELFDTMRERFGVEPRTEHYACVV 461

Query: 557 DILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVG 616
           D+LGRAG  E+A E I+ + + P  +VWGALLGAC +H  T L R+ASEKLFELDP++ G
Sbjct: 462 DLLGRAGMEERAYEIIQRMPMRPSISVWGALLGACKMHGKTELGRIASEKLFELDPQDSG 521

Query: 617 YHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTA 676
            HVLLSN+ ++   + +A  VR+ +K   + K PGC+ I      HVF + D  H +++ 
Sbjct: 522 NHVLLSNMLASAGRWAEATDVRKEMKNVGIKKEPGCSWITWKNVVHVFYAKDTKHDRNSE 581

Query: 677 IYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIR 736
           I A+L KL  +M+ +G+  +T  +L+DVEEEEKE  +  HSEKLA+AFGLI   P   IR
Sbjct: 582 IQALLAKLKKQMQASGYMPDTQYSLYDVEEEEKETEVFQHSEKLALAFGLIHIPPSVPIR 641

Query: 737 IIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           I KNLR+C+DCH A KF+S + GR I+VRD NRFH+FK   CSC DYW
Sbjct: 642 ITKNLRICVDCHRAFKFVSGIVGREIIVRDNNRFHYFKQFECSCKDYW 689



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 90/327 (27%), Positives = 151/327 (46%), Gaps = 28/327 (8%)

Query: 12  FLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCY----ARALFFSI 67
           F +   GA   S   Q H  ++  GF  D+S    +++ + DF   C     ARA+F  +
Sbjct: 221 FFNACAGAMFLSLGEQFHGFVVTCGFDMDVS----VSNAMVDFYGKCRCAGKARAVFDGM 276

Query: 68  PKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIG 127
              +   +  +I  ++ +   + ++  Y   R NT   P +F  S VL+  +     + G
Sbjct: 277 RVRNSVSWCSMIVAYAQHGAEEDALAVYMGAR-NTGEEPTDFMVSSVLTTCAGLLGLNFG 335

Query: 128 VLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKN 187
             LH  A+ S   +++FV +ALVD+Y K   V+ A +VF  MPE++ V WN+MI G    
Sbjct: 336 RALHAVAVRSCIDANIFVASALVDMYGKCGGVEDAEQVFLDMPERNLVTWNAMIGGYAHI 395

Query: 188 CCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEI-QCLGLKLGFHDHVY 246
              Q+++ VF  M+R+GGT  +  ++  V+ A +     + G E+   +  + G      
Sbjct: 396 GDAQNALAVFDAMIRSGGTSPNHITLVNVITACSRGGLTKDGYELFDTMRERFGVEPRTE 455

Query: 247 VLTGLVSFYSKCGEVERA-ELLFRDIVRPDLISCNAMISGYTCNGKTE----SSLRLFR- 300
               +V    + G  ERA E++ R  +RP +    A++     +GKTE    +S +LF  
Sbjct: 456 HYACVVDLLGRAGMEERAYEIIQRMPMRPSISVWGALLGACKMHGKTELGRIASEKLFEL 515

Query: 301 ------------QLLASAERVNSSTIV 315
                        +LASA R   +T V
Sbjct: 516 DPQDSGNHVLLSNMLASAGRWAEATDV 542


>gi|357457743|ref|XP_003599152.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355488200|gb|AES69403.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1125

 Score =  411 bits (1057), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 238/745 (31%), Positives = 396/745 (53%), Gaps = 6/745 (0%)

Query: 41   LSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRK 100
            +S    L     ++ +   A  +F ++ + D   +N II   ++N   + S+  +  +R+
Sbjct: 386  VSVANSLISMFGNYDSVEEASRVFNNMQERDTISWNSIITASAHNGRFEESLGHFFWMRR 445

Query: 101  NTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVK 160
                T D  T S +L A  +      G  LHG    SG  S++ V  +L+ +Y +    +
Sbjct: 446  THPKT-DYITISALLPACGSAQHLKWGRGLHGLITKSGLESNVCVCNSLLSMYAQAGSSE 504

Query: 161  SARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAV 220
             A  VF  MP +D + WNSM++  +++  +  +I +  +M++     ++  +    L A 
Sbjct: 505  DAELVFHTMPARDLISWNSMMASHVEDGKYSHAILLLVEMLKTRKA-MNYVTFTTALSAC 563

Query: 221  AEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCN 280
              +++L++   +    +    H ++ +   LV+ Y K G ++ A+ + + +   D+++ N
Sbjct: 564  YNLEKLKI---VHAFVIHFAVHHNLIIGNTLVTMYGKFGLMDEAQKVCKIMPERDVVTWN 620

Query: 281  AMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLI-PVFYPFGHLHLTNCIHSFCLK 339
            A+I G+  +    ++++ F  +       N  TIV L+     P   L     IH+  + 
Sbjct: 621  ALIGGHADDKDPNATIQAFNLMRREGLLSNYITIVNLLGTCMSPDYLLKHGMPIHAHIVV 680

Query: 340  SGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISL 399
            +G   ++ V ++L T+Y++  ++  +  +FD  + K+ ++WNA+ +     G  EEA+  
Sbjct: 681  AGFELDTYVQSSLITMYAQCGDLNTSSYIFDVLANKNSSTWNAIFSANAHYGPGEEALKF 740

Query: 400  FQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAK 459
               M+   V  +  + S  L+    L  +  G+ +H  +    FE + YV  A +DMY K
Sbjct: 741  IARMRNDGVDLDQFSFSVALATIGNLTVLDEGQQLHSWIIKLGFELDEYVLNATMDMYGK 800

Query: 460  CGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSV 519
            CG I +   +  +   +S+ +WN +IS    HG   +A + F EML  G++P  VTF+S+
Sbjct: 801  CGEIDDVFRILPIPKIRSKRSWNILISALARHGFFRQATEAFHEMLDLGLKPDHVTFVSL 860

Query: 520  LYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEP 579
            L ACSH GLV EG   F SM  + G     EH  C++D+LGR+G+L +A  FI  + V P
Sbjct: 861  LSACSHGGLVDEGLVYFSSMTSEFGVPTAIEHCVCIIDLLGRSGRLAEAEGFIDKMPVPP 920

Query: 580  GPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQ 639
               VW +LL AC +H +  L R A+++LFEL+  +   +VL SN+ ++ + +     VR+
Sbjct: 921  NEFVWRSLLAACKVHGNLELGRKAADRLFELNSSDDSAYVLYSNVCASTQRWGDVENVRK 980

Query: 640  VVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVT 699
             ++ + L K P C+ I++      F  GDQ HPQS  IYA LE+L    RE G   +T  
Sbjct: 981  QMESQSLKKKPACSWIKLKNKVMTFGMGDQFHPQSAQIYAKLEELRKMTREEGHMPDTSY 1040

Query: 700  ALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTG 759
            AL D +EE+KE  +  HSE++A+AFGLI +  G+ +RI KNLRVC DCH+  K +SK+ G
Sbjct: 1041 ALQDTDEEQKEHNLWNHSERIALAFGLINSAEGSPLRIFKNLRVCGDCHSVFKLVSKIVG 1100

Query: 760  RVIVVRDANRFHHFKGGVCSCGDYW 784
            R IVVRD+ RFHHF GG CSC DYW
Sbjct: 1101 RKIVVRDSYRFHHFHGGKCSCSDYW 1125



 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 160/608 (26%), Positives = 289/608 (47%), Gaps = 27/608 (4%)

Query: 27  QTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNE 86
           Q H  ++  G  +++   T L H      +   A  LF  I +P++  +  ++  +++N 
Sbjct: 270 QIHGYVVKCGLMSNVFVGTSLLHFYGTHGSVSEANKLFEEIEEPNIVSWTSLMVCYADNG 329

Query: 87  MPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYG-SDLFV 145
             K  +  Y HLR N  +   N T + V+       D+++G  + G  I SG   S + V
Sbjct: 330 HTKEVLNIYRHLRHNGLICTGN-TMATVIRTCGMFGDKTMGYQILGDVIKSGLDTSSVSV 388

Query: 146 GAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGG 205
             +L+ ++  +  V+ A +VF+ M E+DT+ WNS+I+    N  F++S+  F  M R   
Sbjct: 389 ANSLISMFGNYDSVEEASRVFNNMQERDTISWNSIITASAHNGRFEESLGHFFWMRRTHP 448

Query: 206 TWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAE 265
              D  +++A+LPA    Q L+ G  +  L  K G   +V V   L+S Y++ G  E AE
Sbjct: 449 K-TDYITISALLPACGSAQHLKWGRGLHGLITKSGLESNVCVCNSLLSMYAQAGSSEDAE 507

Query: 266 LLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFG 325
           L+F  +   DLIS N+M++ +  +GK   ++ L  ++L + + +N  T    +   Y   
Sbjct: 508 LVFHTMPARDLISWNSMMASHVEDGKYSHAILLLVEMLKTRKAMNYVTFTTALSACYNLE 567

Query: 326 HLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIA 385
            L +   +H+F +   +  N  +   L T+Y +   M+ A+K+     E+ + +WNA+I 
Sbjct: 568 KLKI---VHAFVIHFAVHHNLIIGNTLVTMYGKFGLMDEAQKVCKIMPERDVVTWNALIG 624

Query: 386 GYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLG-AISLGKWVHELVKSRNFE 444
           G+  +      I  F  M+   +  N +T+ ++L  C      +  G  +H  +    FE
Sbjct: 625 GHADDKDPNATIQAFNLMRREGLLSNYITIVNLLGTCMSPDYLLKHGMPIHAHIVVAGFE 684

Query: 445 SNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEM 504
            + YV ++LI MYA+CG++  +  +FD++++K+  TWN + S    +G G EAL+  + M
Sbjct: 685 LDTYVQSSLITMYAQCGDLNTSSYIFDVLANKNSSTWNAIFSANAHYGPGEEALKFIARM 744

Query: 505 LHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQ 564
            + G+     +F   L    +  ++ EG ++  S I   GF+         +D+ G+ G+
Sbjct: 745 RNDGVDLDQFSFSVALATIGNLTVLDEGQQL-HSWIIKLGFELDEYVLNATMDMYGKCGE 803

Query: 565 LEKALEFIKGLAVEPGPAV-----WGALLGACMIHKDTNLARVASEKLFE-----LDPEN 614
           ++     +      P P +     W  L+ A   H      R A+E   E     L P++
Sbjct: 804 IDDVFRIL------PIPKIRSKRSWNILISALARH---GFFRQATEAFHEMLDLGLKPDH 854

Query: 615 VGYHVLLS 622
           V +  LLS
Sbjct: 855 VTFVSLLS 862



 Score =  186 bits (471), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 135/493 (27%), Positives = 241/493 (48%), Gaps = 18/493 (3%)

Query: 113 FVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEK 172
           F+    S   + ++G  LH   +      + F    LV++Y KF  +K A+ VFDKM ++
Sbjct: 152 FLQKGFSEISEGNVGKALHALCVKDVIQQNTFYTNTLVNMYSKFGSIKYAQHVFDKMYDR 211

Query: 173 DTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGM-E 231
           +   WN+MISG ++   +  ++  F  M  NG T   S  +A+++ A      +  G  +
Sbjct: 212 NDASWNNMISGFVRVGWYHKAMQFFCHMFENGVT-PSSYVIASMVTACDRSGCMTEGARQ 270

Query: 232 IQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGK 291
           I    +K G   +V+V T L+ FY   G V  A  LF +I  P+++S  +++  Y  NG 
Sbjct: 271 IHGYVVKCGLMSNVFVGTSLLHFYGTHGSVSEANKLFEEIEEPNIVSWTSLMVCYADNGH 330

Query: 292 TESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNS-SVLT 350
           T+  L ++R L  +      +T+  +I     FG   +   I    +KSG+ ++S SV  
Sbjct: 331 TKEVLNIYRHLRHNGLICTGNTMATVIRTCGMFGDKTMGYQILGDVIKSGLDTSSVSVAN 390

Query: 351 ALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAP 410
           +L +++   + +E A ++F+   E+   SWN++I     NG  EE++  F  M+ +    
Sbjct: 391 SLISMFGNYDSVEEASRVFNNMQERDTISWNSIITASAHNGRFEESLGHFFWMRRTHPKT 450

Query: 411 NPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELF 470
           + +T+S++L AC     +  G+ +H L+     ESN+ V  +L+ MYA+ G+  +A  +F
Sbjct: 451 DYITISALLPACGSAQHLKWGRGLHGLITKSGLESNVCVCNSLLSMYAQAGSSEDAELVF 510

Query: 471 DLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVR 530
             M  +  ++WN+M++ +   G    A+ L  EML +    + VTF + L AC +   + 
Sbjct: 511 HTMPARDLISWNSMMASHVEDGKYSHAILLLVEMLKTRKAMNYVTFTTALSACYN---LE 567

Query: 531 EGDEIFQSMIHDHGFKPLAEHY-----ACMVDILGRAGQLEKALEFIKGLAVEPGPAVWG 585
           +   +   +IH       A H+       +V + G+ G +++A +  K +  E     W 
Sbjct: 568 KLKIVHAFVIH------FAVHHNLIIGNTLVTMYGKFGLMDEAQKVCK-IMPERDVVTWN 620

Query: 586 ALLGACMIHKDTN 598
           AL+G     KD N
Sbjct: 621 ALIGGHADDKDPN 633



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 147/570 (25%), Positives = 263/570 (46%), Gaps = 20/570 (3%)

Query: 29  HAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNEMP 88
           HA  +    Q +      L +  S F +  YA+ +F  +   +   +N +I GF      
Sbjct: 170 HALCVKDVIQQNTFYTNTLVNMYSKFGSIKYAQHVFDKMYDRNDASWNNMISGFVRVGWY 229

Query: 89  KSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVL------LHGHAIVSGYGSD 142
             ++ F+ H+ +N  +TP     S+V+++    CDRS G +      +HG+ +  G  S+
Sbjct: 230 HKAMQFFCHMFEN-GVTPS----SYVIASMVTACDRS-GCMTEGARQIHGYVVKCGLMSN 283

Query: 143 LFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVR 202
           +FVG +L+  Y     V  A K+F+++ E + V W S++     N   ++ + ++  + R
Sbjct: 284 VFVGTSLLHFYGTHGSVSEANKLFEEIEEPNIVSWTSLMVCYADNGHTKEVLNIYRHL-R 342

Query: 203 NGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFH-DHVYVLTGLVSFYSKCGEV 261
           + G      ++A V+       +  +G +I    +K G     V V   L+S +     V
Sbjct: 343 HNGLICTGNTMATVIRTCGMFGDKTMGYQILGDVIKSGLDTSSVSVANSLISMFGNYDSV 402

Query: 262 ERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVF 321
           E A  +F ++   D IS N++I+    NG+ E SL  F  +  +  + +  TI  L+P  
Sbjct: 403 EEASRVFNNMQERDTISWNSIITASAHNGRFEESLGHFFWMRRTHPKTDYITISALLPAC 462

Query: 322 YPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWN 381
               HL     +H    KSG+ SN  V  +L ++Y++    E A  +F     + L SWN
Sbjct: 463 GSAQHLKWGRGLHGLITKSGLESNVCVCNSLLSMYAQAGSSEDAELVFHTMPARDLISWN 522

Query: 382 AMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSR 441
           +M+A + ++G    AI L  EM  ++ A N VT ++ LSAC  L  +   K VH  V   
Sbjct: 523 SMMASHVEDGKYSHAILLLVEMLKTRKAMNYVTFTTALSACYNLEKL---KIVHAFVIHF 579

Query: 442 NFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLF 501
               N+ +   L+ MY K G + EA+++  +M  +  VTWN +I G+         +Q F
Sbjct: 580 AVHHNLIIGNTLVTMYGKFGLMDEAQKVCKIMPERDVVTWNALIGGHADDKDPNATIQAF 639

Query: 502 SEMLHSGIRPSGVTFLSVLYAC-SHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILG 560
           + M   G+  + +T +++L  C S   L++ G  I   ++   GF+      + ++ +  
Sbjct: 640 NLMRREGLLSNYITIVNLLGTCMSPDYLLKHGMPIHAHIV-VAGFELDTYVQSSLITMYA 698

Query: 561 RAGQLEKALEFIKGLAVEPGPAVWGALLGA 590
           + G L  +  +I  +      + W A+  A
Sbjct: 699 QCGDLNTS-SYIFDVLANKNSSTWNAIFSA 727



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 45/178 (25%), Positives = 84/178 (47%), Gaps = 1/178 (0%)

Query: 411 NPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELF 470
           NP     +    +++   ++GK +H L      + N + +  L++MY+K G+I  A+ +F
Sbjct: 146 NPQVSRFLQKGFSEISEGNVGKALHALCVKDVIQQNTFYTNTLVNMYSKFGSIKYAQHVF 205

Query: 471 DLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVR 530
           D M  +++ +WN MISG+   G   +A+Q F  M  +G+ PS     S++ AC  +G + 
Sbjct: 206 DKMYDRNDASWNNMISGFVRVGWYHKAMQFFCHMFENGVTPSSYVIASMVTACDRSGCMT 265

Query: 531 EGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALL 588
           EG       +   G          ++   G  G + +A +  + +  EP    W +L+
Sbjct: 266 EGARQIHGYVVKCGLMSNVFVGTSLLHFYGTHGSVSEANKLFEEIE-EPNIVSWTSLM 322


>gi|297851096|ref|XP_002893429.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297339271|gb|EFH69688.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 790

 Score =  411 bits (1057), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 251/757 (33%), Positives = 381/757 (50%), Gaps = 104/757 (13%)

Query: 130 LHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPE------------------ 171
           +HG+ I  G+     +   L+D+Y K S +  AR++FD++ E                  
Sbjct: 36  VHGNIITFGFQPHAHILNRLIDVYCKSSELDYARQLFDEISEPDKIARTTMVSGYCASGD 95

Query: 172 ---------------KDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAV 216
                          +DTV++N+MI+G   N     +I +F  M ++ G   D  + A+V
Sbjct: 96  IALARSVFEETPVSMRDTVMYNAMITGFSHNNDGYSAINLFCKM-KHEGFKPDDFTYASV 154

Query: 217 LPAVA-EVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGE----VERAELLFRDI 271
           L  +A  V + +  ++     LK G      V   LVS YS+C      +  A  +F DI
Sbjct: 155 LAGLALVVDDEKQCVQFHAAALKSGAGYVTSVSNALVSVYSRCASSPSLLHSARKVFDDI 214

Query: 272 VRPD--------------------------------LISCNAMISGYTCNGKTESSLRLF 299
              D                                L++ NAMISGY   G  + +L + 
Sbjct: 215 PEKDERSWTTMMTGYVKNGCFDLGKELLKGMDENMKLVAYNAMISGYVNCGLYQEALEMV 274

Query: 300 RQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRL 359
           R++++S   ++  T   +I        L L   +H++ L+    S      +L T+Y + 
Sbjct: 275 RRMVSSGIELDEFTYPSVIRACANARLLQLGKQVHAYVLRREDFS-FHFDNSLVTLYYKC 333

Query: 360 NEMEAARKLFDESSEKSLASWNAMIAGYT------------------------------- 388
            +   AR +F++   K L SWNA+++GY                                
Sbjct: 334 GKFNEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLA 393

Query: 389 QNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIY 448
           +NG  EE + LF  M+     P     S  + +CA LGA   G+  H  +    F+S++ 
Sbjct: 394 ENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQFHAQLVKIGFDSSLS 453

Query: 449 VSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSG 508
              ALI MYAKCG + EA+++F  M     V+WN +I+  G HGHG+EA+ ++ EML  G
Sbjct: 454 AGNALITMYAKCGVVEEAQQVFRTMPCLDSVSWNALIAALGQHGHGVEAVDVYEEMLKKG 513

Query: 509 IRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKA 568
           IRP  +TFL+VL ACSHAGLV +G + F SM   +   P A+HYA ++D+L R+G+  +A
Sbjct: 514 IRPDRITFLTVLTACSHAGLVDQGRKYFNSMETVYRIPPGADHYARLIDLLCRSGKFSEA 573

Query: 569 LEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAE 628
              I+ L  +P   +W ALL  C +H +  L  +A++KLF L PE+ G ++LLSN+Y+A 
Sbjct: 574 ESIIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPEHDGTYMLLSNMYAAT 633

Query: 629 RDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKM 688
             + + A VR++++ R + K   C+ IE+    H F   D  HP++ A+Y  L+ L  +M
Sbjct: 634 GQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHTFLVDDTSHPEAEAVYKYLQDLGKEM 693

Query: 689 REAGFQTETVTALHDVEEE-EKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDC 747
           R  G+  +T   LHDVE +  KE M+  HSEK+A+AFGL+   PGT IRI KNLR C DC
Sbjct: 694 RRLGYVPDTSFVLHDVESDGHKEDMLTTHSEKIAVAFGLMKLPPGTTIRIFKNLRTCGDC 753

Query: 748 HTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           H   +F+SKV  R I++RD  RFHHF+ G CSCG++W
Sbjct: 754 HNFFRFLSKVVQRDIILRDRKRFHHFRNGECSCGNFW 790



 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 150/583 (25%), Positives = 243/583 (41%), Gaps = 117/583 (20%)

Query: 20  KTQSQLTQ-THAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPD------- 71
           +T  QL +  H  II  GFQ     + +L           YAR LF  I +PD       
Sbjct: 27  RTSLQLARAVHGNIITFGFQPHAHILNRLIDVYCKSSELDYARQLFDEISEPDKIARTTM 86

Query: 72  --------------------------LFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALT 105
                                       ++N +I GFS+N    S+I  +  + K+    
Sbjct: 87  VSGYCASGDIALARSVFEETPVSMRDTVMYNAMITGFSHNNDGYSAINLFCKM-KHEGFK 145

Query: 106 PDNFTYSFVLSA-ASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKF----SWVK 160
           PD+FTY+ VL+  A    D    V  H  A+ SG G    V  ALV +Y +     S + 
Sbjct: 146 PDDFTYASVLAGLALVVDDEKQCVQFHAAALKSGAGYVTSVSNALVSVYSRCASSPSLLH 205

Query: 161 SARKVFDKMPEKDTVLWNSMISGLMKNCCF------------------------------ 190
           SARKVFD +PEKD   W +M++G +KN CF                              
Sbjct: 206 SARKVFDDIPEKDERSWTTMMTGYVKNGCFDLGKELLKGMDENMKLVAYNAMISGYVNCG 265

Query: 191 --QDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLK---LGFHDHV 245
             Q+++ +   MV + G  LD  +  +V+ A A  + L+LG ++    L+     FH   
Sbjct: 266 LYQEALEMVRRMV-SSGIELDEFTYPSVIRACANARLLQLGKQVHAYVLRREDFSFH--- 321

Query: 246 YVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLAS 305
                LV+ Y KCG+   A  +F  +   DL+S NA++SGY  +G    +  +F+++   
Sbjct: 322 -FDNSLVTLYYKCGKFNEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEM--K 378

Query: 306 AERVNSSTIV-----------------------GLIPVFYPF-GHLHLTNCIHSFC---- 337
            + + S  I+                       G  P  Y F G +     + ++C    
Sbjct: 379 EKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQ 438

Query: 338 -----LKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGL 392
                +K G  S+ S   AL T+Y++   +E A+++F         SWNA+IA   Q+G 
Sbjct: 439 FHAQLVKIGFDSSLSAGNALITMYAKCGVVEEAQQVFRTMPCLDSVSWNALIAALGQHGH 498

Query: 393 TEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLG-KWVHELVKSRNFESNIYVST 451
             EA+ +++EM    + P+ +T  ++L+AC+  G +  G K+ + +              
Sbjct: 499 GVEAVDVYEEMLKKGIRPDRITFLTVLTACSHAGLVDQGRKYFNSMETVYRIPPGADHYA 558

Query: 452 ALIDMYAKCGNIVEARELFDLMSHKSEV-TWNTMISGYGLHGH 493
            LID+  + G   EA  + + +  K     W  ++SG  +HG+
Sbjct: 559 RLIDLLCRSGKFSEAESIIESLPFKPTAEIWEALLSGCRVHGN 601



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 71/298 (23%), Positives = 121/298 (40%), Gaps = 88/298 (29%)

Query: 327 LHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSE------------ 374
           L L   +H   +  G   ++ +L  L  VY + +E++ AR+LFDE SE            
Sbjct: 30  LQLARAVHGNIITFGFQPHAHILNRLIDVYCKSSELDYARQLFDEISEPDKIARTTMVSG 89

Query: 375 ---------------------KSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPV 413
                                +    +NAMI G++ N     AI+LF +M+     P+  
Sbjct: 90  YCASGDIALARSVFEETPVSMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDDF 149

Query: 414 TVSSILSA----------CAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGN- 462
           T +S+L+           C Q  A +L      +           VS AL+ +Y++C + 
Sbjct: 150 TYASVLAGLALVVDDEKQCVQFHAAALKSGAGYVTS---------VSNALVSVYSRCASS 200

Query: 463 ---IVEARELFDLMSHKSEVTWNTMISGYGLHG---------HGL--------------- 495
              +  AR++FD +  K E +W TM++GY  +G          G+               
Sbjct: 201 PSLLHSARKVFDDIPEKDERSWTTMMTGYVKNGCFDLGKELLKGMDENMKLVAYNAMISG 260

Query: 496 --------EALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGF 545
                   EAL++   M+ SGI     T+ SV+ AC++A L++ G ++   ++    F
Sbjct: 261 YVNCGLYQEALEMVRRMVSSGIELDEFTYPSVIRACANARLLQLGKQVHAYVLRREDF 318



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 84/370 (22%), Positives = 154/370 (41%), Gaps = 58/370 (15%)

Query: 72  LFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLH 131
           L  +N +I G+ N  + + ++     +  ++ +  D FTY  V+ A +      +G  +H
Sbjct: 251 LVAYNAMISGYVNCGLYQEALEMVRRM-VSSGIELDEFTYPSVIRACANARLLQLGKQVH 309

Query: 132 GHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNS------------ 179
            + +     S  F   +LV LY+K      AR +F+KMP KD V WN+            
Sbjct: 310 AYVLRREDFSFHF-DNSLVTLYYKCGKFNEARAIFEKMPAKDLVSWNALLSGYVSSGHIG 368

Query: 180 -------------------MISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAV 220
                              MISGL +N   ++ + +F  M R G    D  + +  + + 
Sbjct: 369 EAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCD-YAFSGAIKSC 427

Query: 221 AEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCN 280
           A +     G +     +K+GF   +     L++ Y+KCG VE A+ +FR +   D +S N
Sbjct: 428 AVLGAYCNGQQFHAQLVKIGFDSSLSAGNALITMYAKCGVVEEAQQVFRTMPCLDSVSWN 487

Query: 281 AMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKS 340
           A+I+    +G    ++ ++ ++L    R +  T + +           LT C H+  +  
Sbjct: 488 ALIAALGQHGHGVEAVDVYEEMLKKGIRPDRITFLTV-----------LTACSHAGLVDQ 536

Query: 341 GIVSNSSVLTAL-----STVYSRLNEMEAARKLFDESS--------EKSLASWNAMIAGY 387
           G    +S+ T       +  Y+RL ++      F E+         + +   W A+++G 
Sbjct: 537 GRKYFNSMETVYRIPPGADHYARLIDLLCRSGKFSEAESIIESLPFKPTAEIWEALLSGC 596

Query: 388 TQNGLTEEAI 397
             +G  E  I
Sbjct: 597 RVHGNMELGI 606



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 41/153 (26%), Positives = 62/153 (40%), Gaps = 42/153 (27%)

Query: 410 PNPVTVSSI-------LSACAQL--GAISLGKWVHELVKSRNFESNIYVSTALIDMYAKC 460
           PNP  V +I       L  C  L   ++ L + VH  + +  F+ + ++   LID+Y K 
Sbjct: 3   PNPDLVRAIANRYAANLRLCLPLRRTSLQLARAVHGNIITFGFQPHAHILNRLIDVYCKS 62

Query: 461 GNIVEARELFDLMSHKSEVTWNTMISGYGLHG---------------------------- 492
             +  AR+LFD +S   ++   TM+SGY   G                            
Sbjct: 63  SELDYARQLFDEISEPDKIARTTMVSGYCASGDIALARSVFEETPVSMRDTVMYNAMITG 122

Query: 493 -----HGLEALQLFSEMLHSGIRPSGVTFLSVL 520
                 G  A+ LF +M H G +P   T+ SVL
Sbjct: 123 FSHNNDGYSAINLFCKMKHEGFKPDDFTYASVL 155



 Score = 42.0 bits (97), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 52/242 (21%), Positives = 101/242 (41%), Gaps = 28/242 (11%)

Query: 27  QTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNE 86
           Q HAQ++  GF + LS    L    +       A+ +F ++P  D   +N +I     + 
Sbjct: 438 QFHAQLVKIGFDSSLSAGNALITMYAKCGVVEEAQQVFRTMPCLDSVSWNALIAALGQHG 497

Query: 87  MPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGY------- 139
               ++  Y  + K   + PD  T+  VL+A S       G++  G    +         
Sbjct: 498 HGVEAVDVYEEMLKK-GIRPDRITFLTVLTACS-----HAGLVDQGRKYFNSMETVYRIP 551

Query: 140 -GSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTV-LWNSMISGLMKNCCFQDSIW-- 195
            G+D +  A L+DL  +      A  + + +P K T  +W +++SG   +   +  I   
Sbjct: 552 PGADHY--ARLIDLLCRSGKFSEAESIIESLPFKPTAEIWEALLSGCRVHGNMELGIIAA 609

Query: 196 --VFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGM-------EIQCLGLKLGFHDHVY 246
             +FG +  + GT++  +++ A      EV  +R  M       E+ C  +++    H +
Sbjct: 610 DKLFGLIPEHDGTYMLLSNMYAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHTF 669

Query: 247 VL 248
           ++
Sbjct: 670 LV 671


>gi|359476124|ref|XP_002282605.2| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Vitis vinifera]
 gi|296082021|emb|CBI21026.3| unnamed protein product [Vitis vinifera]
          Length = 583

 Score =  411 bits (1057), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 215/553 (38%), Positives = 320/553 (57%), Gaps = 5/553 (0%)

Query: 237 LKLGFHDHVYVLTGLVSFYSKCGEVERA-ELLF--RDIVRPDLISCNAMISGYTCNGKTE 293
           +KLGF ++  VLT   S  S    +  A  L+F   D    D    + +I  Y  + +++
Sbjct: 31  IKLGFQNNPLVLTKFTSASSNLDAIPYAMSLVFSVEDARVYDAFLFSTIIRAYAESSQSK 90

Query: 294 -SSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTAL 352
            +++  +  +L      N      ++        L+L   +H   +K G   +  V   +
Sbjct: 91  HNAIFYYNLMLGYGISPNKYAFPFVLKACAGLRDLNLGKAVHGSLVKFGFDDDIFVQNTM 150

Query: 353 STVYSRLNE-MEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPN 411
             +Y   +  ME ARKLFDE  +    +W AMI GY + G +  A+ LF++MQ + V P+
Sbjct: 151 VHMYCCCSGGMEFARKLFDEMPKLDPVTWTAMIGGYARLGQSAGAVGLFRKMQIAGVCPD 210

Query: 412 PVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFD 471
            VT+ S+LSAC  LGA+ LGKW+   ++       + +S AL+DM+AKCG++ +A  LF 
Sbjct: 211 DVTMVSVLSACTDLGALELGKWIESYIEKERVLKTVELSNALVDMFAKCGDVDKALGLFR 270

Query: 472 LMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVRE 531
            MS ++ V+W ++I G  +HG GLEA+ LF EM  SG+ P  + F+ +L ACSH+GLV  
Sbjct: 271 NMSKRTIVSWTSVIVGLAMHGRGLEAVSLFEEMKASGMVPEDIAFIGLLSACSHSGLVER 330

Query: 532 GDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGAC 591
           G + F  M    G  P  EHY CMVD+L RAG + +ALEF++ + +EP P +W  L+ AC
Sbjct: 331 GRQYFSEMTRQFGIVPKIEHYGCMVDLLSRAGLVTEALEFVERMPIEPNPIIWRTLISAC 390

Query: 592 MIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPG 651
            +H +  L    S++L   +P +   +VLLSNIY    D+ + + +R  + K+ + K PG
Sbjct: 391 RVHGELKLGESISKQLIRNEPMHESNYVLLSNIYGKMLDWEKKSKIRVAMGKKGIQKVPG 450

Query: 652 CTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKEL 711
            T+IE+    H F  GD+ H Q   I  M+ ++  +M+ AG+   T     D++EE+KE 
Sbjct: 451 STMIELDNEIHEFIVGDRSHNQYNEIIKMVNEMGREMKRAGYAPTTTEVFLDIDEEDKED 510

Query: 712 MMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFH 771
            +  HSEKLAIAF L+ T PG+ IRI KNLRVC DCH+A+KFISK+  R IV+RD +RFH
Sbjct: 511 ALSRHSEKLAIAFALLNTPPGSPIRITKNLRVCGDCHSASKFISKIYNREIVMRDRSRFH 570

Query: 772 HFKGGVCSCGDYW 784
           HF+ G CSCGD+W
Sbjct: 571 HFRDGQCSCGDFW 583



 Score =  169 bits (427), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 127/457 (27%), Positives = 220/457 (48%), Gaps = 51/457 (11%)

Query: 13  LSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKP-- 70
           L +L+   T  +L Q H  II  GFQN+   +TK     S+  A  YA +L FS+     
Sbjct: 11  LDILQACNTLPKLAQLHTHIIKLGFQNNPLVLTKFTSASSNLDAIPYAMSLVFSVEDARV 70

Query: 71  -DLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVL 129
            D FLF+ IIR ++ +   K +  FY +L     ++P+ + + FVL A +   D ++G  
Sbjct: 71  YDAFLFSTIIRAYAESSQSKHNAIFYYNLMLGYGISPNKYAFPFVLKACAGLRDLNLGKA 130

Query: 130 LHGHAIVSGYGSDLFVGAALVDLYFKFS-WVKSARKVFDKMPEKDTVLWNSMISGLMKNC 188
           +HG  +  G+  D+FV   +V +Y   S  ++ ARK+FD+MP+ D V W +MI G  +  
Sbjct: 131 VHGSLVKFGFDDDIFVQNTMVHMYCCCSGGMEFARKLFDEMPKLDPVTWTAMIGGYARLG 190

Query: 189 CFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVL 248
               ++ +F  M +  G   D  ++ +VL A  ++  L LG  I+    K      V + 
Sbjct: 191 QSAGAVGLFRKM-QIAGVCPDDVTMVSVLSACTDLGALELGKWIESYIEKERVLKTVELS 249

Query: 249 TGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAER 308
             LV  ++KCG+V++A  LFR++ +  ++S  ++I G   +G+   ++ LF ++ AS   
Sbjct: 250 NALVDMFAKCGDVDKALGLFRNMSKRTIVSWTSVIVGLAMHGRGLEAVSLFEEMKAS--- 306

Query: 309 VNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKL 368
                  G++P    F  L L+ C H     SG+V                   E  R+ 
Sbjct: 307 -------GMVPEDIAFIGL-LSACSH-----SGLV-------------------ERGRQY 334

Query: 369 FDESSEK-----SLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACA 423
           F E + +      +  +  M+   ++ GL  EA+   + M    + PNP+   +++SAC 
Sbjct: 335 FSEMTRQFGIVPKIEHYGCMVDLLSRAGLVTEALEFVERM---PIEPNPIIWRTLISACR 391

Query: 424 QLGAISLGKWV-HELVKSRNFESNIYVSTALIDMYAK 459
             G + LG+ +  +L+++     + YV   L ++Y K
Sbjct: 392 VHGELKLGESISKQLIRNEPMHESNYV--LLSNIYGK 426


>gi|357507741|ref|XP_003624159.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|87162577|gb|ABD28372.1| Tetratricopeptide-like helical [Medicago truncatula]
 gi|355499174|gb|AES80377.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 755

 Score =  411 bits (1057), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 232/703 (33%), Positives = 366/703 (52%), Gaps = 49/703 (6%)

Query: 130 LHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCC 189
           LHGH    G    L     L+ LY K S +  A K+FD++  K+T  W  +ISG  +   
Sbjct: 54  LHGHYFKKGSLQILNSANYLLTLYVKSSNLDHAHKLFDEITHKNTQTWTILISGFARAAG 113

Query: 190 FQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLT 249
             + ++     ++  G   +  ++++VL   +    ++ G  I    L+ G    V +  
Sbjct: 114 SSELVFSLFREMQADGACPNQYTLSSVLKCCSRENNIQFGKGIHAWILRNGVGGDVVLEN 173

Query: 250 GLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERV 309
            ++  Y KC E E AE  F  ++  D++S N MI  Y   G  E SL +FR    + + V
Sbjct: 174 SILDLYLKCKEFEYAESFFELMIEKDVVSWNIMIGAYLREGDVEKSLEMFRNF-PNKDVV 232

Query: 310 NSSTIV-GLIPVFYPFGHLHLTNC-------------------------------IHSFC 337
           + +TI+ GLI   Y    L    C                               +H   
Sbjct: 233 SWNTIIDGLIQCGYERLALEQLYCMVAHGTEFSPVTFSIALILVSSLSLVEVGRQLHGRV 292

Query: 338 LKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDE----------------SSEKSLASWN 381
           L  G+ S+  + ++L  +Y +   M+ A  +  +                  +  + SW+
Sbjct: 293 LTFGLNSDGYIRSSLVEMYGKCGRMDKASTILKDVPLNFLRKGNFGVTCKEPKARMVSWS 352

Query: 382 AMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSR 441
           +M++GY  NG  E+ +  F+ M    +  +  TV++I+SACA  G +  GK +H  ++  
Sbjct: 353 SMVSGYVWNGKYEDGMKTFRSMVCELIVVDIRTVATIISACANAGILEFGKQIHAYIQKI 412

Query: 442 NFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLF 501
               + YV ++LIDMY+K G++ +A  +F+ +   + V W +MISG  LHG G EA+ LF
Sbjct: 413 GLRIDAYVGSSLIDMYSKSGSLDDALMIFEQIKEPNVVLWTSMISGCALHGQGKEAISLF 472

Query: 502 SEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGR 561
             ML+ GI P+ VTF+ VL ACSH GL+ EG   F+ M   +   P  EHY  MV++ GR
Sbjct: 473 EGMLNLGIIPNEVTFVGVLNACSHVGLIEEGCRYFRMMKDTYHINPEVEHYTSMVNLYGR 532

Query: 562 AGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLL 621
           AG L +A  FI   ++    +VW + L +C +HK+ N+ +  SE L +  P +   ++LL
Sbjct: 533 AGHLIEAKNFIFENSISHFTSVWRSFLSSCRLHKNFNMGKSVSEMLLQSAPSDPDAYILL 592

Query: 622 SNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAML 681
           SN+ S+   + +AA VR ++ +R + K PG + +++    H FT GD+ HPQ   IY+ L
Sbjct: 593 SNMCSSNHQWDEAAIVRSLMYQRGVKKQPGQSWVQLKDQIHSFTVGDRSHPQDKEIYSYL 652

Query: 682 EKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNL 741
           + L G+++E G+  +    + DVEEE+ E+++  HSEKLA+ F +I T P T IRI+KNL
Sbjct: 653 DSLIGRLKEIGYSLDAKLVMQDVEEEQGEVLISHHSEKLALVFSIINTSPRTPIRIMKNL 712

Query: 742 RVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           R+C DCH   K+ S++  R I+VRD +RFHHFK   CSCG+YW
Sbjct: 713 RICNDCHNFFKYASQLLEREIIVRDTHRFHHFKQSSCSCGEYW 755



 Score =  159 bits (403), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 131/543 (24%), Positives = 250/543 (46%), Gaps = 64/543 (11%)

Query: 59  YARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTA--LTPDNFTYSFVLS 116
           +A  LF  I   +   + ++I GF+      SS   ++  R+  A    P+ +T S VL 
Sbjct: 85  HAHKLFDEITHKNTQTWTILISGFA--RAAGSSELVFSLFREMQADGACPNQYTLSSVLK 142

Query: 117 AASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVL 176
             S   +   G  +H   + +G G D+ +  +++DLY K    + A   F+ M EKD V 
Sbjct: 143 CCSRENNIQFGKGIHAWILRNGVGGDVVLENSILDLYLKCKEFEYAESFFELMIEKDVVS 202

Query: 177 WNSMISGLMKNCCFQDSIWVFGD---------------MVRNG---------------GT 206
           WN MI   ++    + S+ +F +               +++ G               GT
Sbjct: 203 WNIMIGAYLREGDVEKSLEMFRNFPNKDVVSWNTIIDGLIQCGYERLALEQLYCMVAHGT 262

Query: 207 WLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAEL 266
                + +  L  V+ +  + +G ++    L  G +   Y+ + LV  Y KCG +++A  
Sbjct: 263 EFSPVTFSIALILVSSLSLVEVGRQLHGRVLTFGLNSDGYIRSSLVEMYGKCGRMDKAST 322

Query: 267 LFRDI----------------VRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVN 310
           + +D+                 +  ++S ++M+SGY  NGK E  ++ FR ++     V+
Sbjct: 323 ILKDVPLNFLRKGNFGVTCKEPKARMVSWSSMVSGYVWNGKYEDGMKTFRSMVCELIVVD 382

Query: 311 SSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFD 370
             T+  +I      G L     IH++  K G+  ++ V ++L  +YS+   ++ A  +F+
Sbjct: 383 IRTVATIISACANAGILEFGKQIHAYIQKIGLRIDAYVGSSLIDMYSKSGSLDDALMIFE 442

Query: 371 ESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISL 430
           +  E ++  W +MI+G   +G  +EAISLF+ M    + PN VT   +L+AC+ +G I  
Sbjct: 443 QIKEPNVVLWTSMISGCALHGQGKEAISLFEGMLNLGIIPNEVTFVGVLNACSHVGLIEE 502

Query: 431 G-KWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELF--DLMSHKSEVTWNTMISG 487
           G ++   +  + +    +   T+++++Y + G+++EA+     + +SH + V W + +S 
Sbjct: 503 GCRYFRMMKDTYHINPEVEHYTSMVNLYGRAGHLIEAKNFIFENSISHFTSV-WRSFLSS 561

Query: 488 YGLHGHGLEALQLFSEML--HSGIRPSGVTFLSVLYACSHAGLVREGDE--IFQSMIHDH 543
             LH +     +  SEML   +   P     LS + + +H     + DE  I +S+++  
Sbjct: 562 CRLHKN-FNMGKSVSEMLLQSAPSDPDAYILLSNMCSSNH-----QWDEAAIVRSLMYQR 615

Query: 544 GFK 546
           G K
Sbjct: 616 GVK 618


>gi|449453904|ref|XP_004144696.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33170-like [Cucumis sativus]
          Length = 840

 Score =  411 bits (1056), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 248/784 (31%), Positives = 399/784 (50%), Gaps = 69/784 (8%)

Query: 34  IHGFQNDLSTV--TKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSN------- 84
           IHG  +  S +   +L   LS       AR LF  +P  D + +N++I  ++N       
Sbjct: 28  IHGIAHYSSNLDSNQLLSELSKNGRVDEARKLFDQMPYRDKYTWNIMISAYANLGNLVEA 87

Query: 85  ----NEMP-KSSI-------------CFYTHLRKNTAL-----TPDNFTYSFVLSAASAC 121
               NE P K+SI             C    LR+ + +      P  +T   VL A S  
Sbjct: 88  RKLFNETPIKNSITWSSLVSGYCKNGCEVEGLRQFSQMWSDGQKPSQYTLGSVLRACSTL 147

Query: 122 CDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPE-KDTVLWNSM 180
                G ++H +AI     +++FV   LVD+Y K   +  A  +F  +P+ K+ V W +M
Sbjct: 148 SLLHTGKMIHCYAIKIQLEANIFVATGLVDMYSKCKCLLEAEYLFFSLPDRKNYVQWTAM 207

Query: 181 ISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLG 240
           ++G  +N     +I  F +M RN G   +  +  ++L A   +     G ++    +  G
Sbjct: 208 LTGYAQNGESLKAIQCFKEM-RNQGMESNHFTFPSILTACTSISAYAFGRQVHGCIIWSG 266

Query: 241 FHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFR 300
           F  +VYV + LV  Y+KCG++  A ++   +   D++  N+MI G   +G  E +L LF 
Sbjct: 267 FGPNVYVQSALVDMYAKCGDLASARMILDTMEIDDVVCWNSMIVGCVTHGYMEEALVLFH 326

Query: 301 QLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLN 360
           ++     R++  T   ++       +L +   +HS  +K+G  +  +V  AL  +Y++  
Sbjct: 327 KMHNRDIRIDDFTYPSVLKSLASCKNLKIGESVHSLTIKTGFDACKTVSNALVDMYAKQG 386

Query: 361 EMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILS 420
            +  A  +F++  +K + SW +++ GY  NG  E+A+ LF +M+ ++V  +   V+ + S
Sbjct: 387 NLSCALDVFNKILDKDVISWTSLVTGYVHNGFHEKALQLFCDMRTARVDLDQFVVACVFS 446

Query: 421 ACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVT 480
           ACA+L  I  G+ VH      +  S +    +LI MYAKCG + +A  +FD M  ++ ++
Sbjct: 447 ACAELTVIEFGRQVHANFIKSSAGSLLSAENSLITMYAKCGCLEDAIRVFDSMETRNVIS 506

Query: 481 WNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMI 540
           W  +I GY                                   +  GLV  G   F+SM 
Sbjct: 507 WTAIIVGY-----------------------------------AQNGLVETGQSYFESME 531

Query: 541 HDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLA 600
             +G KP ++HYACM+D+LGRAG++ +A   +  + VEP   +W +LL AC +H +  L 
Sbjct: 532 KVYGIKPASDHYACMIDLLGRAGKINEAEHLLNRMDVEPDATIWKSLLSACRVHGNLELG 591

Query: 601 RVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGT 660
             A + L +L+P N   +VLLSN++S    +  AA +R+ +K   + K PG + IE+   
Sbjct: 592 ERAGKNLIKLEPSNSLPYVLLSNMFSVAGRWEDAAHIRRAMKTMGINKEPGYSWIEMKSQ 651

Query: 661 PHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKL 720
            H F S D+ HP +  IY+ ++++   ++EAG   +   AL D++EE KE  +  HSEKL
Sbjct: 652 VHTFISEDRSHPLAAEIYSKIDEMMILIKEAGHVPDMNFALRDMDEEAKERSLAYHSEKL 711

Query: 721 AIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSC 780
           A+AFGL+    G  IRI KNLRVC DCH+A K+IS +  R I++RD N FHHF  G CSC
Sbjct: 712 AVAFGLLTVAKGAPIRIFKNLRVCGDCHSAMKYISSIFKRHIILRDLNCFHHFIEGKCSC 771

Query: 781 GDYW 784
           GD+W
Sbjct: 772 GDFW 775


>gi|225435554|ref|XP_002283117.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
           [Vitis vinifera]
          Length = 624

 Score =  411 bits (1056), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 229/575 (39%), Positives = 320/575 (55%), Gaps = 56/575 (9%)

Query: 256 SKCGEVERAELLFRDIVRPDLISCNAMISGYTC-NGKTESSLRLFRQLLASAERVNSSTI 314
           S  G +  A  LF  I +PD+   N MI  +      + +S+R+F  ++          +
Sbjct: 60  SSFGSLSYAHQLFDQIPKPDVFIYNTMIKAHAVIPTSSHNSMRIFLSMV---------RV 110

Query: 315 VGLIPVFYPFGHLHLTNC-----------IHSFCLKSGIVSNSSVLTALSTVYSRLNEME 363
            G +P  Y F  +    C           I    +K G+ SN  V  A+  +Y+    ++
Sbjct: 111 SGFLPNRYTFVFV-FKACGNGLGVLEGEQIRVHAIKIGLESNLFVTNAMIRMYANWGLVD 169

Query: 364 AARK-------------------------------LFDESSEKSLASWNAMIAGYTQNGL 392
            AR+                               +FDE SE+ + SW  +IAGY Q G 
Sbjct: 170 EARRVFDWSLDQDLYSWNIMIGGYVGSGEIGRAKEMFDEMSERDVVSWTTIIAGYVQVGC 229

Query: 393 TEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTA 452
            +EA+ LF EM  +   PN  T++S L+ACA L A+  G+W+H  +     + N  +  +
Sbjct: 230 FKEALDLFHEMLQTGPPPNEFTLASALAACANLVALDQGRWIHVYIDKSEIKMNERLLAS 289

Query: 453 LIDMYAKCGNIVEARELF-DLMSHKSEV-TWNTMISGYGLHGHGLEALQLFSEMLHSGIR 510
           L+DMYAKCG I  A ++F D    K +V  WN MI GY +HG   EA+ LF +M    + 
Sbjct: 290 LLDMYAKCGEIDFAAKVFHDEYGLKLKVWPWNAMIGGYAMHGKSKEAIDLFEQMKVEKVS 349

Query: 511 PSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALE 570
           P+ VTF+++L ACSH  LV EG   F+SM   +G +P  EHY CMVD+LGR+G L++A E
Sbjct: 350 PNKVTFVALLNACSHGKLVEEGRGYFKSMASSYGIEPEIEHYGCMVDLLGRSGLLKEAEE 409

Query: 571 FIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERD 630
            +  + + P   +WGALLGAC IHKD    +   + + ELD +++G HVLL+N+YSA   
Sbjct: 410 TVFNMPMAPDATIWGALLGACRIHKDIERGQRIGKIIKELDSDHIGCHVLLANLYSASGQ 469

Query: 631 YLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMRE 690
           + +A  VRQ ++     K PGC+ IE+ G  H F  GD+ HPQ+  +Y  L+++  K++ 
Sbjct: 470 WDEAKAVRQKIEVSGRKKTPGCSSIELNGVFHQFLVGDRSHPQTKQLYLFLDEMTTKLKN 529

Query: 691 AGFQTETVTALHDV-EEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHT 749
           AG+  E    L D+ +EE+KE  +  HSEKLAIAFGLI T PGT IRI+KNLRVC DCH 
Sbjct: 530 AGYVPEFGEVLLDIDDEEDKETALSKHSEKLAIAFGLINTPPGTAIRIVKNLRVCADCHE 589

Query: 750 ATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           ATKFISKV  R I+VRD  R+HHFK G CSC DYW
Sbjct: 590 ATKFISKVYKREIIVRDRIRYHHFKDGFCSCKDYW 624



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 132/509 (25%), Positives = 226/509 (44%), Gaps = 84/509 (16%)

Query: 2   SMKTP-QSRNLFLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRL--SDFKATC 58
           + K P  S  L L  L+  K+ +Q+ QTHA +I  G      T  KL   L  S F +  
Sbjct: 7   TFKKPLNSNQLQLFSLESCKSMNQIKQTHAHLITTGLILHPITANKLLKVLIASSFGSLS 66

Query: 59  YARALFFSIPKPDLFLFNVIIRGFSNNEMPKSS---ICFYTHLRKNTALTPDNFTYSFVL 115
           YA  LF  IPKPD+F++N +I+  ++  +P SS   +  +  + + +   P+ +T+ FV 
Sbjct: 67  YAHQLFDQIPKPDVFIYNTMIK--AHAVIPTSSHNSMRIFLSMVRVSGFLPNRYTFVFVF 124

Query: 116 SAASACCDRSIGVL----LHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFD---- 167
            A    C   +GVL    +  HAI  G  S+LFV  A++ +Y  +  V  AR+VFD    
Sbjct: 125 KA----CGNGLGVLEGEQIRVHAIKIGLESNLFVTNAMIRMYANWGLVDEARRVFDWSLD 180

Query: 168 ---------------------------KMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDM 200
                                      +M E+D V W ++I+G ++  CF++++ +F +M
Sbjct: 181 QDLYSWNIMIGGYVGSGEIGRAKEMFDEMSERDVVSWTTIIAGYVQVGCFKEALDLFHEM 240

Query: 201 VRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGE 260
           ++ G    +  ++A+ L A A +  L  G  I     K     +  +L  L+  Y+KCGE
Sbjct: 241 LQTGPP-PNEFTLASALAACANLVALDQGRWIHVYIDKSEIKMNERLLASLLDMYAKCGE 299

Query: 261 VERAELLFRDI--VRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLI 318
           ++ A  +F D   ++  +   NAMI GY  +GK++ ++ LF Q+       N  T V L 
Sbjct: 300 IDFAAKVFHDEYGLKLKVWPWNAMIGGYAMHGKSKEAIDLFEQMKVEKVSPNKVTFVAL- 358

Query: 319 PVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLA 378
                     L  C H   ++ G         ++++ Y    E+E               
Sbjct: 359 ----------LNACSHGKLVEEG----RGYFKSMASSYGIEPEIE--------------- 389

Query: 379 SWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELV 438
            +  M+    ++GL +EA      M    +AP+     ++L AC     I  G+ + +++
Sbjct: 390 HYGCMVDLLGRSGLLKEAEETVFNM---PMAPDATIWGALLGACRIHKDIERGQRIGKII 446

Query: 439 KSRNFESNIYVSTALIDMYAKCGNIVEAR 467
           K  +   +I     L ++Y+  G   EA+
Sbjct: 447 KELD-SDHIGCHVLLANLYSASGQWDEAK 474



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 97/399 (24%), Positives = 178/399 (44%), Gaps = 38/399 (9%)

Query: 131 HGHAIVSGYGSDLFVGAALVDLYF--KFSWVKSARKVFDKMPEKDTVLWNSMISG-LMKN 187
           H H I +G          L+ +     F  +  A ++FD++P+ D  ++N+MI    +  
Sbjct: 35  HAHLITTGLILHPITANKLLKVLIASSFGSLSYAHQLFDQIPKPDVFIYNTMIKAHAVIP 94

Query: 188 CCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYV 247
               +S+ +F  MVR  G   +  +   V  A      +  G +I+   +K+G   +++V
Sbjct: 95  TSSHNSMRIFLSMVRVSGFLPNRYTFVFVFKACGNGLGVLEGEQIRVHAIKIGLESNLFV 154

Query: 248 LTGLVSFYSK-------------------------------CGEVERAELLFRDIVRPDL 276
              ++  Y+                                 GE+ RA+ +F ++   D+
Sbjct: 155 TNAMIRMYANWGLVDEARRVFDWSLDQDLYSWNIMIGGYVGSGEIGRAKEMFDEMSERDV 214

Query: 277 ISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSF 336
           +S   +I+GY   G  + +L LF ++L +    N  T+   +        L     IH +
Sbjct: 215 VSWTTIIAGYVQVGCFKEALDLFHEMLQTGPPPNEFTLASALAACANLVALDQGRWIHVY 274

Query: 337 CLKSGIVSNSSVLTALSTVYSRLNEMEAARKLF-DESSEK-SLASWNAMIAGYTQNGLTE 394
             KS I  N  +L +L  +Y++  E++ A K+F DE   K  +  WNAMI GY  +G ++
Sbjct: 275 IDKSEIKMNERLLASLLDMYAKCGEIDFAAKVFHDEYGLKLKVWPWNAMIGGYAMHGKSK 334

Query: 395 EAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGK-WVHELVKSRNFESNIYVSTAL 453
           EAI LF++M+  KV+PN VT  ++L+AC+    +  G+ +   +  S   E  I     +
Sbjct: 335 EAIDLFEQMKVEKVSPNKVTFVALLNACSHGKLVEEGRGYFKSMASSYGIEPEIEHYGCM 394

Query: 454 IDMYAKCGNIVEARE-LFDLMSHKSEVTWNTMISGYGLH 491
           +D+  + G + EA E +F++        W  ++    +H
Sbjct: 395 VDLLGRSGLLKEAEETVFNMPMAPDATIWGALLGACRIH 433



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 83/329 (25%), Positives = 140/329 (42%), Gaps = 43/329 (13%)

Query: 334 HSFCLKSGIVSNSSVLTALSTVY--SRLNEMEAARKLFDESSEKSLASWNAMIAGYTQ-N 390
           H+  + +G++ +      L  V   S    +  A +LFD+  +  +  +N MI  +    
Sbjct: 35  HAHLITTGLILHPITANKLLKVLIASSFGSLSYAHQLFDQIPKPDVFIYNTMIKAHAVIP 94

Query: 391 GLTEEAISLFQEM-QASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYV 449
             +  ++ +F  M + S   PN  T   +  AC     +  G+ +         ESN++V
Sbjct: 95  TSSHNSMRIFLSMVRVSGFLPNRYTFVFVFKACGNGLGVLEGEQIRVHAIKIGLESNLFV 154

Query: 450 STALIDMYAKCGNIVEAR-------------------------------ELFDLMSHKSE 478
           + A+I MYA  G + EAR                               E+FD MS +  
Sbjct: 155 TNAMIRMYANWGLVDEARRVFDWSLDQDLYSWNIMIGGYVGSGEIGRAKEMFDEMSERDV 214

Query: 479 VTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQS 538
           V+W T+I+GY   G   EAL LF EML +G  P+  T  S L AC++   + +G  I   
Sbjct: 215 VSWTTIIAGYVQVGCFKEALDLFHEMLQTGPPPNEFTLASALAACANLVALDQGRWI-HV 273

Query: 539 MIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIK---GLAVEPGPAVWGALLGACMIHK 595
            I     K      A ++D+  + G+++ A +      GL ++  P  W A++G   +H 
Sbjct: 274 YIDKSEIKMNERLLASLLDMYAKCGEIDFAAKVFHDEYGLKLKVWP--WNAMIGGYAMHG 331

Query: 596 DTNLARVASE--KLFELDPENVGYHVLLS 622
            +  A    E  K+ ++ P  V +  LL+
Sbjct: 332 KSKEAIDLFEQMKVEKVSPNKVTFVALLN 360


>gi|125599128|gb|EAZ38704.1| hypothetical protein OsJ_23104 [Oryza sativa Japonica Group]
          Length = 1280

 Score =  411 bits (1056), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 213/513 (41%), Positives = 309/513 (60%), Gaps = 6/513 (1%)

Query: 275  DLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIH 334
            D    N ++     + +   +L L R+ LA     ++ T   LI        L    C+H
Sbjct: 771  DPFPLNTVLRIAAGSPRPRVALELHRRRLALP---DTHTYPPLIQACARLLALREGECLH 827

Query: 335  SFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESS--EKSLASWNAMIAGYTQNGL 392
            +   K+G V+   V  +L  +Y      E+A K+FDE     ++L SWN+M+  +  NG 
Sbjct: 828  AEAAKNGFVTLVFVQNSLVHLYGACGLFESAHKVFDEMPVRGRNLVSWNSMLNSFAANGR 887

Query: 393  TEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTA 452
              E +++F EM     AP+  T+ S+L+ACA+ GA++LG+ VH  V+      N +VS A
Sbjct: 888  PNEVLTVFWEMLGVDFAPDGFTIVSVLTACAEFGALALGRRVHVYVEKVGLVENSHVSNA 947

Query: 453  LIDMYAKCGNIVEARELFDLMS-HKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRP 511
            LID+YAKCG++ +AR +F+ M   ++ V+W ++I G   +G G EAL+LFS M    + P
Sbjct: 948  LIDLYAKCGSVNDARRIFEEMGLGRTVVSWTSLIVGLAANGFGKEALELFSLMEREKLVP 1007

Query: 512  SGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEF 571
            + +T + VLYACSH GLV +G   F  M  D+G  P  EH  CMVD+LGRAG++E+A ++
Sbjct: 1008 TEITMVGVLYACSHCGLVDDGFRYFDRMKEDYGISPRIEHLGCMVDLLGRAGRVEEAYDY 1067

Query: 572  IKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDY 631
            I  + +EP   VW  LLG+C +HK   L +VA E+L ELDP + G +VLLSN+Y+A   +
Sbjct: 1068 IITMPLEPNAVVWRTLLGSCAMHKKLELGKVAWERLVELDPGHSGDYVLLSNLYAAVGMW 1127

Query: 632  LQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREA 691
                 +R+ + K ++ K PG +L+E+  + + F  GD+ HP+S  IY ML ++  ++R  
Sbjct: 1128 ADVHVLRKTMVKDRVRKNPGHSLVELRNSVYEFVMGDRSHPESEQIYEMLAEIAERLRRE 1187

Query: 692  GFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTAT 751
            G+   T   L D+EEEEKE  +  HSE+LAIAF L+ + PG  IRIIKNLR+C DCH A 
Sbjct: 1188 GYIPRTSNVLADIEEEEKETALNYHSERLAIAFALLKSLPGIPIRIIKNLRMCGDCHVAF 1247

Query: 752  KFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
              ISKV  R I+VRD +RFHHF+GG CSC DYW
Sbjct: 1248 NLISKVYDREIIVRDRSRFHHFQGGACSCKDYW 1280



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 95/346 (27%), Positives = 164/346 (47%), Gaps = 18/346 (5%)

Query: 209  DSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLF 268
            D+ +   ++ A A +  LR G  +     K GF   V+V   LV  Y  CG  E A  +F
Sbjct: 803  DTHTYPPLIQACARLLALREGECLHAEAAKNGFVTLVFVQNSLVHLYGACGLFESAHKVF 862

Query: 269  RDI-VR-PDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGH 326
             ++ VR  +L+S N+M++ +  NG+    L +F ++L      +  TIV ++     FG 
Sbjct: 863  DEMPVRGRNLVSWNSMLNSFAANGRPNEVLTVFWEMLGVDFAPDGFTIVSVLTACAEFGA 922

Query: 327  LHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESS-EKSLASWNAMIA 385
            L L   +H +  K G+V NS V  AL  +Y++   +  AR++F+E    +++ SW ++I 
Sbjct: 923  LALGRRVHVYVEKVGLVENSHVSNALIDLYAKCGSVNDARRIFEEMGLGRTVVSWTSLIV 982

Query: 386  GYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLG-KWVHELVKSRNFE 444
            G   NG  +EA+ LF  M+  K+ P  +T+  +L AC+  G +  G ++   + +     
Sbjct: 983  GLAANGFGKEALELFSLMEREKLVPTEITMVGVLYACSHCGLVDDGFRYFDRMKEDYGIS 1042

Query: 445  SNIYVSTALIDMYAKCGNIVEARELFDLMS-HKSEVTWNTMISGYGLHGHGLEALQLFSE 503
              I     ++D+  + G + EA +    M    + V W T++    +H   LE  ++  E
Sbjct: 1043 PRIEHLGCMVDLLGRAGRVEEAYDYIITMPLEPNAVVWRTLLGSCAMH-KKLELGKVAWE 1101

Query: 504  ML------HSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDH 543
             L      HSG        LS LYA    G+  +   + ++M+ D 
Sbjct: 1102 RLVELDPGHSG----DYVLLSNLYAA--VGMWADVHVLRKTMVKDR 1141



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 105/396 (26%), Positives = 170/396 (42%), Gaps = 46/396 (11%)

Query: 71   DLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLL 130
            D F  N ++R  + +  P+ ++  +   R+  AL PD  TY  ++ A +       G  L
Sbjct: 771  DPFPLNTVLRIAAGSPRPRVALELH---RRRLAL-PDTHTYPPLIQACARLLALREGECL 826

Query: 131  HGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMP--EKDTVLWNSMISGLMKNC 188
            H  A  +G+ + +FV  +LV LY      +SA KVFD+MP   ++ V WNSM++    N 
Sbjct: 827  HAEAAKNGFVTLVFVQNSLVHLYGACGLFESAHKVFDEMPVRGRNLVSWNSMLNSFAANG 886

Query: 189  CFQDSIWVFGDMVRNGGTWL-DSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYV 247
               + + VF +M+  G  +  D  ++ +VL A AE   L LG  +     K+G  ++ +V
Sbjct: 887  RPNEVLTVFWEML--GVDFAPDGFTIVSVLTACAEFGALALGRRVHVYVEKVGLVENSHV 944

Query: 248  LTGLVSFYSKCGEVERAELLFRDI-VRPDLISCNAMISGYTCNGKTESSLRLFRQLLASA 306
               L+  Y+KCG V  A  +F ++ +   ++S  ++I G   NG  + +L LF  +    
Sbjct: 945  SNALIDLYAKCGSVNDARRIFEEMGLGRTVVSWTSLIVGLAANGFGKEALELFSLMEREK 1004

Query: 307  ERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAAR 366
                  T+VG+           L  C H   +  G              + R+ E     
Sbjct: 1005 LVPTEITMVGV-----------LYACSHCGLVDDGF-----------RYFDRMKE----- 1037

Query: 367  KLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLG 426
               D      +     M+    + G  EEA      M    + PN V   ++L +CA   
Sbjct: 1038 ---DYGISPRIEHLGCMVDLLGRAGRVEEAYDYIITM---PLEPNAVVWRTLLGSCAMHK 1091

Query: 427  AISLGKWVHE-LVKSRNFESNIYVSTALIDMYAKCG 461
             + LGK   E LV+     S  YV   L ++YA  G
Sbjct: 1092 KLELGKVAWERLVELDPGHSGDYV--LLSNLYAAVG 1125


>gi|449499218|ref|XP_004160754.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Cucumis sativus]
          Length = 766

 Score =  411 bits (1056), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 234/686 (34%), Positives = 370/686 (53%), Gaps = 27/686 (3%)

Query: 15  LLKGAKTQSQLTQTHAQIIIHGFQNDLSTV--TKLAH---RLSDFKATCYARALFFSIPK 69
            LK AKT       H  ++   F N  S V    +AH   + SD  A C    LF  + +
Sbjct: 83  FLKQAKT------VHGFLLKSKFSNHHSLVLLNHVAHAYSKCSDIDAAC---RLFDQMSQ 133

Query: 70  PDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVL 129
            + F + V+I G + N +      F+  + ++  + PD F YS +L          +G +
Sbjct: 134 RNTFSWTVLIAGLAENGLFLDGFEFFCEM-QSQGIFPDQFAYSGILQICIGLDSIELGNM 192

Query: 130 LHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCC 189
           +H   ++ G+ S  FV  AL+++Y K   ++ + KVF+ M E + V WN+MI+G   N  
Sbjct: 193 VHAQIVIRGFTSHTFVSTALLNMYAKLQEIEDSYKVFNTMTEVNVVSWNAMITGFTSNDL 252

Query: 190 FQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLT 249
           + D+  +F  M+  G T  D+ +   V  A+  ++++    E+    L+LG   +  V T
Sbjct: 253 YLDAFDLFLRMMGEGVT-PDAQTFIGVAKAIGMLRDVNKAKEVSGYALELGVDSNTLVGT 311

Query: 250 GLVSFYSKCGEVERAELLFRDIVRPDLISC------NAMISGYTCNGKTESSLRLFRQLL 303
            L+   SKCG ++ A    R I     I+C      NAMISGY  +G  E +L LF ++ 
Sbjct: 312 ALIDMNSKCGSLQEA----RSIFNSHFITCRFNAPWNAMISGYLRSGFNEKALELFAKMC 367

Query: 304 ASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGI-VSNSSVLTALSTVYSRLNEM 362
            +   ++  T   +         L L   +H+  +KSG+ V+  S+  A++  Y++   +
Sbjct: 368 QNDIYLDHYTYCSVFNAIAALKCLSLGKKVHARAIKSGLEVNYVSISNAVANAYAKCGSL 427

Query: 363 EAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSAC 422
           E  RK+F+   ++ L SW +++  Y+Q    ++AI +F  M+A  +APN  T SS+L +C
Sbjct: 428 EDVRKVFNRMEDRDLISWTSLVTAYSQCSEWDKAIEIFSNMRAEGIAPNQFTFSSVLVSC 487

Query: 423 AQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWN 482
           A L  +  G+ VH ++     + +  + +AL+DMYAKCG + +A+++F+ +S+   V+W 
Sbjct: 488 ANLCLLEYGQQVHGIICKVGLDMDKCIESALVDMYAKCGCLGDAKKVFNRISNADTVSWT 547

Query: 483 TMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHD 542
            +I+G+  HG   +ALQLF  M+  G+ P+ VTFL VL+ACSH GLV EG + F+ M   
Sbjct: 548 AIIAGHAQHGIVDDALQLFRRMVQLGVEPNAVTFLCVLFACSHGGLVEEGLQYFKLMKKT 607

Query: 543 HGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARV 602
           +G  P  EHYAC+VD+L R G L  A+EFI  + VEP   VW  LLGAC +H +  L  +
Sbjct: 608 YGLVPEMEHYACIVDLLSRVGHLNDAMEFISRMPVEPNEMVWQTLLGACRVHGNVELGEL 667

Query: 603 ASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPH 662
           A++K+     EN   +VLLSN Y     Y    ++R V+K++ + K PGC+ I V GT H
Sbjct: 668 AAQKILSFKAENSATYVLLSNTYIESGSYKDGLSLRHVMKEQGVKKEPGCSWISVNGTLH 727

Query: 663 VFTSGDQLHPQSTAIYAMLEKLNGKM 688
            F +GDQ HP+   IYA LE+L  K+
Sbjct: 728 KFYAGDQQHPEKDKIYAKLEELKLKL 753


>gi|449434296|ref|XP_004134932.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Cucumis sativus]
 gi|449479547|ref|XP_004155632.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Cucumis sativus]
          Length = 638

 Score =  411 bits (1056), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 231/624 (37%), Positives = 330/624 (52%), Gaps = 71/624 (11%)

Query: 162 ARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVA 221
           A  +++ +        N+MI   +K    + SI ++  M R+     +  ++  VL A +
Sbjct: 85  ALSIYNSISHPTVFATNNMIRCFVKGDLPRHSISLYSHMCRSFVAAPNKHTLTFVLQACS 144

Query: 222 EVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNA 281
               +R G ++Q   +KLGF   V+V   L+  Y  C  V                    
Sbjct: 145 NAFAIREGAQVQTHVIKLGFVKDVFVRNALIHLYCTCCRV-------------------- 184

Query: 282 MISGYTCNGKTESSLRLFRQLLASAERVN-SSTIVGLIPVFYPFGHLHLTNCIHSFCLKS 340
                      ES+ ++F ++ +S + V+ +S IVG +                      
Sbjct: 185 -----------ESAKQVFDEVPSSRDVVSWNSMIVGFV---------------------- 211

Query: 341 GIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLF 400
                            RL ++  A+KLF E  EK + SW  +I+G  QNG  E+A+  F
Sbjct: 212 -----------------RLGQISVAQKLFVEMPEKDVISWGTIISGCVQNGELEKALDYF 254

Query: 401 QEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKC 460
           +E+   K+ PN   + S+L+A AQLG +  GK +H +  S  F     + TAL+DMYAKC
Sbjct: 255 KELGEQKLRPNEAILVSLLAAAAQLGTLEYGKRIHSIANSLRFPMTASLGTALVDMYAKC 314

Query: 461 GNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVL 520
           G I E+R LFD M  K + +WN MI G   HG G EAL LF + L  G  P  VTF+ VL
Sbjct: 315 GCIDESRFLFDRMPEKDKWSWNVMICGLATHGLGQEALALFEKFLTQGFHPVNVTFIGVL 374

Query: 521 YACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPG 580
            ACS AGLV EG   F+ M   +G +P  EHY CMVD+L RAG +  A+E I  +   P 
Sbjct: 375 TACSRAGLVSEGKHFFKLMTDTYGIEPEMEHYGCMVDLLSRAGFVYDAVEMINRMPAPPD 434

Query: 581 PAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQV 640
           P +W ++LG+C +H    L      KL ++DP + G++V L+ I++  R +   + VR++
Sbjct: 435 PVLWASVLGSCQVHGFIELGEEIGNKLIQMDPTHNGHYVQLARIFARLRKWEDVSKVRRL 494

Query: 641 VKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTA 700
           + +R   K  G +LIE  G  H F +GD+ H ++T IY MLE +  ++  AG+     + 
Sbjct: 495 MAERNSNKIAGWSLIEAEGRVHRFVAGDKEHERTTEIYKMLEIMGVRIAAAGYSANVSSV 554

Query: 701 LHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGR 760
           LHD+EEEEKE  +K HSE+LAIAFGL+ T+ G  IRIIKNLRVC DCH  +K IS V  R
Sbjct: 555 LHDIEEEEKENAIKEHSERLAIAFGLLVTKDGDCIRIIKNLRVCGDCHEVSKIISLVFER 614

Query: 761 VIVVRDANRFHHFKGGVCSCGDYW 784
            I+VRD +RFHHFK G+CSC DYW
Sbjct: 615 EIIVRDGSRFHHFKKGICSCQDYW 638



 Score =  145 bits (366), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 128/507 (25%), Positives = 223/507 (43%), Gaps = 82/507 (16%)

Query: 23  SQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATC---YARALFFSIPKPDLFLFNVII 79
           +Q+ Q HA+I++ G  ND    + L   L+   ++    YA +++ SI  P +F  N +I
Sbjct: 45  TQIKQAHARILVLGLANDGRITSHLLAFLAISSSSLPSDYALSIYNSISHPTVFATNNMI 104

Query: 80  RGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGY 139
           R F   ++P+ SI  Y+H+ ++    P+  T +FVL A S       G  +  H I  G+
Sbjct: 105 RCFVKGDLPRHSISLYSHMCRSFVAAPNKHTLTFVLQACSNAFAIREGAQVQTHVIKLGF 164

Query: 140 GSDLFVGAALVDLYFKFSWVKSARKVFD-------------------------------- 167
             D+FV  AL+ LY     V+SA++VFD                                
Sbjct: 165 VKDVFVRNALIHLYCTCCRVESAKQVFDEVPSSRDVVSWNSMIVGFVRLGQISVAQKLFV 224

Query: 168 KMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWL--DSTSVAAVLPAVAEVQE 225
           +MPEKD + W ++ISG ++N   + ++  F ++   G   L  +   + ++L A A++  
Sbjct: 225 EMPEKDVISWGTIISGCVQNGELEKALDYFKEL---GEQKLRPNEAILVSLLAAAAQLGT 281

Query: 226 LRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISG 285
           L  G  I  +   L F     + T LV  Y+KCG ++ +  LF  +   D  S N MI G
Sbjct: 282 LEYGKRIHSIANSLRFPMTASLGTALVDMYAKCGCIDESRFLFDRMPEKDKWSWNVMICG 341

Query: 286 YTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSN 345
              +G  + +L LF + L       + T +G++                + C ++G+VS 
Sbjct: 342 LATHGLGQEALALFEKFLTQGFHPVNVTFIGVL----------------TACSRAGLVSE 385

Query: 346 SSVLTALST-VYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQ 404
                 L T  Y    EME                +  M+   ++ G   +A+ +   M 
Sbjct: 386 GKHFFKLMTDTYGIEPEME---------------HYGCMVDLLSRAGFVYDAVEMINRMP 430

Query: 405 ASKVAPNPVTVSSILSACAQLGAISLGKWV-HELVKSRNFESNIYVSTALIDMYAKCGNI 463
           A    P+PV  +S+L +C   G I LG+ + ++L++     +  YV  A I  +A+    
Sbjct: 431 A---PPDPVLWASVLGSCQVHGFIELGEEIGNKLIQMDPTHNGHYVQLARI--FARLRKW 485

Query: 464 VEARELFDLMSHKSEVTWNTMISGYGL 490
            +  ++  LM+ ++    +  I+G+ L
Sbjct: 486 EDVSKVRRLMAERN----SNKIAGWSL 508



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 62/222 (27%), Positives = 109/222 (49%), Gaps = 10/222 (4%)

Query: 346 SSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQA 405
           +S L A   + S     + A  +++  S  ++ + N MI  + +  L   +ISL+  M  
Sbjct: 66  TSHLLAFLAISSSSLPSDYALSIYNSISHPTVFATNNMIRCFVKGDLPRHSISLYSHMCR 125

Query: 406 SKVA-PNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIV 464
           S VA PN  T++ +L AC+   AI  G  V   V    F  +++V  ALI +Y  C  + 
Sbjct: 126 SFVAAPNKHTLTFVLQACSNAFAIREGAQVQTHVIKLGFVKDVFVRNALIHLYCTCCRVE 185

Query: 465 EARELFD-LMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYAC 523
            A+++FD + S +  V+WN+MI G+   G    A +LF EM    +    +++ +++  C
Sbjct: 186 SAKQVFDEVPSSRDVVSWNSMIVGFVRLGQISVAQKLFVEMPEKDV----ISWGTIISGC 241

Query: 524 SHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQL 565
              G + +  + F+ +    G + L  + A +V +L  A QL
Sbjct: 242 VQNGELEKALDYFKEL----GEQKLRPNEAILVSLLAAAAQL 279


>gi|449468588|ref|XP_004152003.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Cucumis sativus]
          Length = 558

 Score =  411 bits (1056), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 210/527 (39%), Positives = 311/527 (59%), Gaps = 15/527 (2%)

Query: 264 AELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYP 323
           A  +F  I  PD I+ N +I  ++    + S    F            S  + L    +P
Sbjct: 41  ARYVFSRIPSPDTIAYNTIIRSHSRFFPSHSLFYFFSM---------RSNGIPLDNFTFP 91

Query: 324 F-----GHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLA 378
           F       L +   +HS  +K G+ S+  V  AL  VY     +E A K+FDE SE+   
Sbjct: 92  FVLKACSRLQINLHLHSLIVKYGLDSDIFVQNALICVYGYCGSLEMAVKVFDEMSERDSV 151

Query: 379 SWNAMIAGYTQNGLTEEAISLFQEMQ-ASKVAPNPVTVSSILSACAQLGAISLGKWVHEL 437
           SW+ +IA +  NG   EA+ LF++MQ   KV P+ VT+ S++SA + LG + LG+WV   
Sbjct: 152 SWSTVIASFLNNGYASEALDLFEKMQLEDKVVPDEVTMLSVISAISHLGDLELGRWVRAF 211

Query: 438 VKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEA 497
           +       ++ + TALIDM+++CG+I E+  +F+ M+ ++ +TW  +I+G G+HG   EA
Sbjct: 212 IGRLGLGVSVALGTALIDMFSRCGSIDESIVVFEKMAVRNVLTWTALINGLGVHGRSTEA 271

Query: 498 LQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVD 557
           L +F  M  SG++P  VTF  VL ACSH GLV+EG +IF+S+   +   PL +HY CMVD
Sbjct: 272 LAMFHSMRKSGVQPDYVTFSGVLVACSHGGLVKEGWDIFESIRKVYRMDPLLDHYGCMVD 331

Query: 558 ILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGY 617
           ILGRAG L +A +F++ + ++P   +W  LLGAC+ H +  LA     K+ ++     G 
Sbjct: 332 ILGRAGLLNEAYDFVERMPMKPNSIIWRTLLGACVNHNNLGLAEKVKAKISKISSSQNGD 391

Query: 618 HVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAI 677
            VLLSN+Y A   +++ A++R  ++++++ K PGC+ I V  T H F SGD  HPQS  I
Sbjct: 392 LVLLSNVYGAAGRWVEKASIRSKMREKRIGKEPGCSSINVDQTIHEFVSGDNSHPQSEDI 451

Query: 678 YAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRI 737
              L  + G +R  G+  +T   LHD+EEEE+E  +  HSEKLA+AF +++ +    IRI
Sbjct: 452 TKFLSSIIGDLRNRGYMMQTKNVLHDIEEEEREHSLSYHSEKLAVAFAILSMKDKRTIRI 511

Query: 738 IKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           +KNLR+C DCH+  K IS    R I++RD NRFHHF+ G+CSC DYW
Sbjct: 512 MKNLRICYDCHSFMKHISVRFERKIIIRDRNRFHHFEKGLCSCHDYW 558



 Score =  136 bits (342), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 119/464 (25%), Positives = 210/464 (45%), Gaps = 57/464 (12%)

Query: 23  SQLTQTHAQIIIHGFQND--------LSTVTKLAHRLSDFKATCYARALFFSIPKPDLFL 74
           + + + H  II    QND        LS V      LS      YAR +F  IP PD   
Sbjct: 2   NNVYRLHCYIIKSSKQNDPLSLRTLLLSCVAAAPESLS------YARYVFSRIPSPDTIA 55

Query: 75  FNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHA 134
           +N IIR  S    P  S+ ++  +R N  +  DNFT+ FVL A    C R + + LH H+
Sbjct: 56  YNTIIRSHSRF-FPSHSLFYFFSMRSN-GIPLDNFTFPFVLKA----CSR-LQINLHLHS 108

Query: 135 IVSGYG--SDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQD 192
           ++  YG  SD+FV  AL+ +Y     ++ A KVFD+M E+D+V W+++I+  + N    +
Sbjct: 109 LIVKYGLDSDIFVQNALICVYGYCGSLEMAVKVFDEMSERDSVSWSTVIASFLNNGYASE 168

Query: 193 SIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLV 252
           ++ +F  M        D  ++ +V+ A++ + +L LG  ++    +LG    V + T L+
Sbjct: 169 ALDLFEKMQLEDKVVPDEVTMLSVISAISHLGDLELGRWVRAFIGRLGLGVSVALGTALI 228

Query: 253 SFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSS 312
             +S+CG ++ + ++F  +   ++++  A+I+G   +G++  +L +F  +  S       
Sbjct: 229 DMFSRCGSIDESIVVFEKMAVRNVLTWTALINGLGVHGRSTEALAMFHSMRKS------- 281

Query: 313 TIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDES 372
              G+ P +  F  + L  C H   +K G                  +  E+ RK++   
Sbjct: 282 ---GVQPDYVTFSGV-LVACSHGGLVKEG-----------------WDIFESIRKVY--R 318

Query: 373 SEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGK 432
            +  L  +  M+    + GL  EA    + M    + PN +   ++L AC     + L +
Sbjct: 319 MDPLLDHYGCMVDILGRAGLLNEAYDFVERM---PMKPNSIIWRTLLGACVNHNNLGLAE 375

Query: 433 WVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHK 476
            V   +   +   N  +   L ++Y   G  VE   +   M  K
Sbjct: 376 KVKAKISKISSSQNGDL-VLLSNVYGAAGRWVEKASIRSKMREK 418


>gi|356534396|ref|XP_003535741.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g04780-like [Glycine max]
          Length = 632

 Score =  411 bits (1056), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 217/566 (38%), Positives = 322/566 (56%), Gaps = 30/566 (5%)

Query: 237 LKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSL 296
           +++G    +   T L++ YSKC  V        +++   LI  N  I   T N +   +L
Sbjct: 77  IRIGLEMDILTSTMLINMYSKCSLVHSTRKKXDEMLVKSLILXNTRIGALTQNAEDRKAL 136

Query: 297 RLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNC-----------IHSFCLKSGIVSN 345
           +L  ++       N  TI  +           L NC           +H+F +K+ I SN
Sbjct: 137 KLLIRMQREVTPFNEFTISSV-----------LCNCAFKCAILECMQLHAFSIKAAIDSN 185

Query: 346 SSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQA 405
             V TAL  VY++ + ++ A ++F+   EK+  +W++M+AGY QNG  +EA+ LF   Q 
Sbjct: 186 CFVXTALLHVYAKCSSIKDASQMFESMPEKNAVTWSSMMAGYVQNGFHDEALLLFHNAQL 245

Query: 406 SKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVE 465
                +P  +SS +SACA L  +  GK VH +     F SNIYV+++LIDMYAKCG I E
Sbjct: 246 MGFDQDPFNISSAVSACAGLATLVEGKQVHAMSHKSGFGSNIYVASSLIDMYAKCGCIRE 305

Query: 466 ARELFD-LMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACS 524
           A  +F+  +  +S V WN MISG+  H    EA+ LF +M   G  P  VT++SVL ACS
Sbjct: 306 AYLVFEGFVEVRSIVLWNAMISGFARHALAQEAMILFEKMQQRGFFPDDVTYVSVLNACS 365

Query: 525 HAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVW 584
           H GL  EG + F  M+  H   P   HY+CM+DILGRAG ++KA + I  ++     ++W
Sbjct: 366 HMGLHEEGQKYFDLMVRQHNLSPSVLHYSCMIDILGRAGLVQKAYDLIGRMSFNATSSMW 425

Query: 585 GALLG-------ACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATV 637
           G++ G       +C I+ +   A +A++ LFE++P N G H+LL+NIY+A +   + A  
Sbjct: 426 GSVRGLSXLIKASCRIYGNIEFAEIAAKHLFEMEPNNAGNHILLANIYAANKKSDEVARA 485

Query: 638 RQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTET 697
           R+++++  + K  G + IE+    H FT G++ HPQ    YA L+ L  ++++  ++ +T
Sbjct: 486 RKLLRETDVRKERGTSWIEIKNKIHSFTVGERNHPQIDDNYAKLDNLVVELKKLNYKVDT 545

Query: 698 VTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKV 757
              LHDVEE  K +++  HSEKLAI FGL+       IRIIKNLR+C DCHT  K +SK 
Sbjct: 546 NNDLHDVEESRKHMLLGHHSEKLAITFGLVCLPTEIPIRIIKNLRICGDCHTFMKLVSKF 605

Query: 758 TGRVIVVRDANRFHHFKGGVCSCGDY 783
             R I+VRD NRFHHFK G+CSCG++
Sbjct: 606 ASREIIVRDTNRFHHFKDGLCSCGEF 631



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 82/286 (28%), Positives = 134/286 (46%), Gaps = 3/286 (1%)

Query: 334 HSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLT 393
           H+  ++ G+  +    T L  +YS+ + + + RK  DE   KSL   N  I   TQN   
Sbjct: 73  HAQIIRIGLEMDILTSTMLINMYSKCSLVHSTRKKXDEMLVKSLILXNTRIGALTQNAED 132

Query: 394 EEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTAL 453
            +A+ L   MQ      N  T+SS+L  CA   AI     +H        +SN +V TAL
Sbjct: 133 RKALKLLIRMQREVTPFNEFTISSVLCNCAFKCAILECMQLHAFSIKAAIDSNCFVXTAL 192

Query: 454 IDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSG 513
           + +YAKC +I +A ++F+ M  K+ VTW++M++GY  +G   EAL LF      G     
Sbjct: 193 LHVYAKCSSIKDASQMFESMPEKNAVTWSSMMAGYVQNGFHDEALLLFHNAQLMGFDQDP 252

Query: 514 VTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIK 573
               S + AC+    + EG ++  +M H  GF       + ++D+  + G + +A    +
Sbjct: 253 FNISSAVSACAGLATLVEGKQV-HAMSHKSGFGSNIYVASSLIDMYAKCGCIREAYLVFE 311

Query: 574 GLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELD--PENVGY 617
           G        +W A++     H     A +  EK+ +    P++V Y
Sbjct: 312 GFVEVRSIVLWNAMISGFARHALAQEAMILFEKMQQRGFFPDDVTY 357



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 87/297 (29%), Positives = 146/297 (49%), Gaps = 7/297 (2%)

Query: 10  NLFLSLLKGAKTQSQL--TQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSI 67
           NL   L   AKT S +     HAQII  G + D+ T T L +  S        R     +
Sbjct: 52  NLHYLLQLCAKTGSSMGGRACHAQIIRIGLEMDILTSTMLINMYSKCSLVHSTRKKXDEM 111

Query: 68  PKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDN-FTYSFVLSAASACCDRSI 126
               L L N  I   + N   + ++     +R    +TP N FT S VL   +  C    
Sbjct: 112 LVKSLILXNTRIGALTQNAEDRKALKLL--IRMQREVTPFNEFTISSVLCNCAFKCAILE 169

Query: 127 GVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMK 186
            + LH  +I +   S+ FV  AL+ +Y K S +K A ++F+ MPEK+ V W+SM++G ++
Sbjct: 170 CMQLHAFSIKAAIDSNCFVXTALLHVYAKCSSIKDASQMFESMPEKNAVTWSSMMAGYVQ 229

Query: 187 NCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVY 246
           N    +++ +F +  +  G   D  ++++ + A A +  L  G ++  +  K GF  ++Y
Sbjct: 230 NGFHDEALLLFHN-AQLMGFDQDPFNISSAVSACAGLATLVEGKQVHAMSHKSGFGSNIY 288

Query: 247 VLTGLVSFYSKCGEVERAELLFRDIVR-PDLISCNAMISGYTCNGKTESSLRLFRQL 302
           V + L+  Y+KCG +  A L+F   V    ++  NAMISG+  +   + ++ LF ++
Sbjct: 289 VASSLIDMYAKCGCIREAYLVFEGFVEVRSIVLWNAMISGFARHALAQEAMILFEKM 345



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 50/198 (25%), Positives = 96/198 (48%), Gaps = 3/198 (1%)

Query: 27  QTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNE 86
           Q HA  I     ++    T L H  +   +   A  +F S+P+ +   ++ ++ G+  N 
Sbjct: 172 QLHAFSIKAAIDSNCFVXTALLHVYAKCSSIKDASQMFESMPEKNAVTWSSMMAGYVQNG 231

Query: 87  MPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVG 146
               ++  + H  +      D F  S  +SA +       G  +H  +  SG+GS+++V 
Sbjct: 232 FHDEALLLF-HNAQLMGFDQDPFNISSAVSACAGLATLVEGKQVHAMSHKSGFGSNIYVA 290

Query: 147 AALVDLYFKFSWVKSARKVFDKMPE-KDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGG 205
           ++L+D+Y K   ++ A  VF+   E +  VLWN+MISG  ++   Q+++ +F  M +  G
Sbjct: 291 SSLIDMYAKCGCIREAYLVFEGFVEVRSIVLWNAMISGFARHALAQEAMILFEKM-QQRG 349

Query: 206 TWLDSTSVAAVLPAVAEV 223
            + D  +  +VL A + +
Sbjct: 350 FFPDDVTYVSVLNACSHM 367



 Score = 46.6 bits (109), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 33/107 (30%), Positives = 49/107 (45%)

Query: 418 ILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKS 477
           +L  CA+ G+   G+  H  +     E +I  ST LI+MY+KC  +   R+  D M  KS
Sbjct: 56  LLQLCAKTGSSMGGRACHAQIIRIGLEMDILTSTMLINMYSKCSLVHSTRKKXDEMLVKS 115

Query: 478 EVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACS 524
            +  NT I     +    +AL+L   M       +  T  SVL  C+
Sbjct: 116 LILXNTRIGALTQNAEDRKALKLLIRMQREVTPFNEFTISSVLCNCA 162


>gi|297736528|emb|CBI25399.3| unnamed protein product [Vitis vinifera]
          Length = 846

 Score =  410 bits (1055), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 225/647 (34%), Positives = 358/647 (55%), Gaps = 16/647 (2%)

Query: 50  RLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNF 109
           + S+F+A C    +F  +P+ ++F + V+I G + + +      F+  +  N+ + PD F
Sbjct: 113 KCSEFRAAC---GVFDEMPQRNVFSWTVMIVGSTEHGLFFDGFKFFCEML-NSGILPDKF 168

Query: 110 TYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKM 169
            YS ++ +        +G ++H   ++ G+ + +FV  +L+++Y K   ++ +  VF+ M
Sbjct: 169 AYSAIIQSCIGLDSLELGKMVHAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMM 228

Query: 170 PEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLG 229
            E + V WN+MISG   N    ++  +F  M +NG    +  ++ +V  AV ++ ++ +G
Sbjct: 229 TEHNQVSWNAMISGCTSNGLHLEAFDLFVRM-KNGACTPNMYTLVSVSKAVGKLVDVNMG 287

Query: 230 MEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISC------NAMI 283
            E+Q    +LG   +V V T L+  YSKCG +  A    R +   + I+C      NAMI
Sbjct: 288 KEVQNCASELGIEGNVLVGTALIDMYSKCGSLHDA----RSVFDTNFINCGVNTPWNAMI 343

Query: 284 SGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGI- 342
           SGY+ +G ++ +L L+ Q+  +    +  T   +         L     +H   LK G+ 
Sbjct: 344 SGYSQSGCSQEALELYVQMCQNGITSDLYTYCSVFNAIAASKSLQFGRVVHGMVLKCGLD 403

Query: 343 VSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQE 402
           +   SV  A++  YS+   +E  RK+FD   E+ + SW  ++  Y+Q+ L EEA++ F  
Sbjct: 404 LMVVSVNNAIADAYSKCGFLEDVRKVFDRMEERDIVSWTTLVTAYSQSSLGEEALATFCL 463

Query: 403 MQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGN 462
           M+    APN  T SS+L +CA L  +  G+ VH L+     ++   + +ALIDMYAKCG+
Sbjct: 464 MREEGFAPNQFTFSSVLISCASLCFLEYGRQVHGLLCKAGLDTEKCIESALIDMYAKCGS 523

Query: 463 IVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYA 522
           I EA ++FD +S+   V+W  +ISGY  HG   +ALQLF  M  SGI+ + VT L VL+A
Sbjct: 524 ITEAGKVFDKISNPDIVSWTAIISGYAQHGLVEDALQLFRRMELSGIKANAVTLLCVLFA 583

Query: 523 CSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPA 582
           CSH G+V EG   FQ M   +G  P  EHYAC++D+LGR G+L+ A+EFI+ + +EP   
Sbjct: 584 CSHGGMVEEGLFYFQQMEDGYGVVPEMEHYACIIDLLGRVGRLDDAMEFIRKMPMEPNEM 643

Query: 583 VWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVK 642
           VW  LLG C +H +  L  +A+ K+  + PE    +VLLSN Y     Y    ++R V+K
Sbjct: 644 VWQTLLGGCRVHGNVELGEIAARKILSIRPEYSATYVLLSNTYIETGSYEDGLSLRNVMK 703

Query: 643 KRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMR 689
            + + K PG + I V G  H F SGDQ HPQ   IY  LE+L  K++
Sbjct: 704 DQGVKKEPGYSWISVKGRVHKFYSGDQQHPQKKEIYVKLEELREKIK 750



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 123/446 (27%), Positives = 221/446 (49%), Gaps = 6/446 (1%)

Query: 152 LYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDST 211
           +Y K S  ++A  VFD+MP+++   W  MI G  ++  F D    F +M+ N G   D  
Sbjct: 110 VYSKCSEFRAACGVFDEMPQRNVFSWTVMIVGSTEHGLFFDGFKFFCEML-NSGILPDKF 168

Query: 212 SVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDI 271
           + +A++ +   +  L LG  +    +  GF  H++V T L++ Y+K G +E +  +F  +
Sbjct: 169 AYSAIIQSCIGLDSLELGKMVHAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMM 228

Query: 272 VRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTN 331
              + +S NAMISG T NG    +  LF ++   A   N  T+V +         +++  
Sbjct: 229 TEHNQVSWNAMISGCTSNGLHLEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGK 288

Query: 332 CIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLAS--WNAMIAGYTQ 389
            + +   + GI  N  V TAL  +YS+   +  AR +FD +      +  WNAMI+GY+Q
Sbjct: 289 EVQNCASELGIEGNVLVGTALIDMYSKCGSLHDARSVFDTNFINCGVNTPWNAMISGYSQ 348

Query: 390 NGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIY- 448
           +G ++EA+ L+ +M  + +  +  T  S+ +A A   ++  G+ VH +V     +  +  
Sbjct: 349 SGCSQEALELYVQMCQNGITSDLYTYCSVFNAIAASKSLQFGRVVHGMVLKCGLDLMVVS 408

Query: 449 VSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSG 508
           V+ A+ D Y+KCG + + R++FD M  +  V+W T+++ Y     G EAL  F  M   G
Sbjct: 409 VNNAIADAYSKCGFLEDVRKVFDRMEERDIVSWTTLVTAYSQSSLGEEALATFCLMREEG 468

Query: 509 IRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKA 568
             P+  TF SVL +C+    +  G ++   ++   G        + ++D+  + G + +A
Sbjct: 469 FAPNQFTFSSVLISCASLCFLEYGRQV-HGLLCKAGLDTEKCIESALIDMYAKCGSITEA 527

Query: 569 LEFIKGLAVEPGPAVWGALLGACMIH 594
            +    ++  P    W A++     H
Sbjct: 528 GKVFDKIS-NPDIVSWTAIISGYAQH 552



 Score =  169 bits (427), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 122/471 (25%), Positives = 223/471 (47%), Gaps = 7/471 (1%)

Query: 28  THAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNEM 87
            HAQI++ GF   +   T L +  +   +   +  +F  + + +   +N +I G ++N +
Sbjct: 189 VHAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTEHNQVSWNAMISGCTSNGL 248

Query: 88  PKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGA 147
              +   +  + KN A TP+ +T   V  A     D ++G  +   A   G   ++ VG 
Sbjct: 249 HLEAFDLFVRM-KNGACTPNMYTLVSVSKAVGKLVDVNMGKEVQNCASELGIEGNVLVGT 307

Query: 148 ALVDLYFKFSWVKSARKVFDK--MPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGG 205
           AL+D+Y K   +  AR VFD   +       WN+MISG  ++ C Q+++ ++  M +NG 
Sbjct: 308 ALIDMYSKCGSLHDARSVFDTNFINCGVNTPWNAMISGYSQSGCSQEALELYVQMCQNGI 367

Query: 206 TWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVY-VLTGLVSFYSKCGEVERA 264
           T  D  +  +V  A+A  + L+ G  +  + LK G    V  V   +   YSKCG +E  
Sbjct: 368 T-SDLYTYCSVFNAIAASKSLQFGRVVHGMVLKCGLDLMVVSVNNAIADAYSKCGFLEDV 426

Query: 265 ELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPF 324
             +F  +   D++S   +++ Y+ +   E +L  F  +       N  T   ++      
Sbjct: 427 RKVFDRMEERDIVSWTTLVTAYSQSSLGEEALATFCLMREEGFAPNQFTFSSVLISCASL 486

Query: 325 GHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMI 384
             L     +H    K+G+ +   + +AL  +Y++   +  A K+FD+ S   + SW A+I
Sbjct: 487 CFLEYGRQVHGLLCKAGLDTEKCIESALIDMYAKCGSITEAGKVFDKISNPDIVSWTAII 546

Query: 385 AGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGK-WVHELVKSRNF 443
           +GY Q+GL E+A+ LF+ M+ S +  N VT+  +L AC+  G +  G  +  ++      
Sbjct: 547 SGYAQHGLVEDALQLFRRMELSGIKANAVTLLCVLFACSHGGMVEEGLFYFQQMEDGYGV 606

Query: 444 ESNIYVSTALIDMYAKCGNIVEARELFDLMS-HKSEVTWNTMISGYGLHGH 493
              +     +ID+  + G + +A E    M    +E+ W T++ G  +HG+
Sbjct: 607 VPEMEHYACIIDLLGRVGRLDDAMEFIRKMPMEPNEMVWQTLLGGCRVHGN 657



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 152/311 (48%), Gaps = 4/311 (1%)

Query: 216 VLPAVAEVQELRLGMEIQCLGLKLGFHDH--VYVLTGLVSFYSKCGEVERAELLFRDIVR 273
           VL   AE   +R    +  L LK  F D   + +       YSKC E   A  +F ++ +
Sbjct: 70  VLRDCAEKGSIREAKAVHGLVLKSNFEDKDLMVLFNHAAHVYSKCSEFRAACGVFDEMPQ 129

Query: 274 PDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCI 333
            ++ S   MI G T +G      + F ++L S    +      +I        L L   +
Sbjct: 130 RNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAYSAIIQSCIGLDSLELGKMV 189

Query: 334 HSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLT 393
           H+  +  G  ++  V T+L  +Y++L  +E +  +F+  +E +  SWNAMI+G T NGL 
Sbjct: 190 HAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTEHNQVSWNAMISGCTSNGLH 249

Query: 394 EEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTAL 453
            EA  LF  M+     PN  T+ S+  A  +L  +++GK V         E N+ V TAL
Sbjct: 250 LEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKEVQNCASELGIEGNVLVGTAL 309

Query: 454 IDMYAKCGNIVEARELFD--LMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRP 511
           IDMY+KCG++ +AR +FD   ++      WN MISGY   G   EAL+L+ +M  +GI  
Sbjct: 310 IDMYSKCGSLHDARSVFDTNFINCGVNTPWNAMISGYSQSGCSQEALELYVQMCQNGITS 369

Query: 512 SGVTFLSVLYA 522
              T+ SV  A
Sbjct: 370 DLYTYCSVFNA 380



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 79/246 (32%), Positives = 129/246 (52%), Gaps = 3/246 (1%)

Query: 325 GHLHLTNCIHSFCLKSGIVSNS--SVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNA 382
           G +     +H   LKS         +    + VYS+ +E  AA  +FDE  ++++ SW  
Sbjct: 78  GSIREAKAVHGLVLKSNFEDKDLMVLFNHAAHVYSKCSEFRAACGVFDEMPQRNVFSWTV 137

Query: 383 MIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRN 442
           MI G T++GL  +    F EM  S + P+    S+I+ +C  L ++ LGK VH  +  R 
Sbjct: 138 MIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAYSAIIQSCIGLDSLELGKMVHAQIVMRG 197

Query: 443 FESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFS 502
           F ++I+VST+L++MYAK G+I ++  +F++M+  ++V+WN MISG   +G  LEA  LF 
Sbjct: 198 FATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTEHNQVSWNAMISGCTSNGLHLEAFDLFV 257

Query: 503 EMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRA 562
            M +    P+  T +SV  A      V  G E+ Q+   + G +        ++D+  + 
Sbjct: 258 RMKNGACTPNMYTLVSVSKAVGKLVDVNMGKEV-QNCASELGIEGNVLVGTALIDMYSKC 316

Query: 563 GQLEKA 568
           G L  A
Sbjct: 317 GSLHDA 322


>gi|449437940|ref|XP_004136748.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g52630-like [Cucumis sativus]
          Length = 598

 Score =  410 bits (1054), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 220/572 (38%), Positives = 336/572 (58%), Gaps = 1/572 (0%)

Query: 213 VAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIV 272
           +  +L +    + LR G+++    LK G      V   L++ YSK      +  +F +  
Sbjct: 28  ICNLLLSFTRSRSLRQGLQLHAHILKFGLQTIPLVSHNLINLYSKTQLPLFSLQVFDETP 87

Query: 273 RPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNC 332
           +    + +++IS +  N     +L+ FR++L    R +                  +   
Sbjct: 88  KKSSTTWSSVISAFAQNEAPLLALQFFRRMLNDGVRPDDHIYPSATKACGFLRRSDVGKS 147

Query: 333 IHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGL 392
           +H   +K+G   +  V ++L  +Y++  E+  AR LFDE  E+++ SW+ MI GY Q   
Sbjct: 148 VHCLAVKTGYYCDVFVGSSLVDMYAKCGEIGDARHLFDEMPERNVVSWSGMIYGYAQLDD 207

Query: 393 TEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTA 452
             EA++LF++     V  N  T SS++  C+    + LGK +H L    +F+S+ +V +A
Sbjct: 208 GVEALTLFKQALIEDVDVNDFTFSSVIRVCSSSTFLELGKLIHGLCLKMSFDSSSFVGSA 267

Query: 453 LIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPS 512
           LI +Y+KCG I  A ++FD +  ++   WN+M+     H H      LF EM + G++P+
Sbjct: 268 LISLYSKCGVIEGAYQVFDEIPTRNLGLWNSMLIACAQHAHTQRVFGLFEEMGNVGMKPN 327

Query: 513 GVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFI 572
            ++FLSVLYACSHAGLV +G E F S++ D+G +P  EHYA +VD+LGRAG+L++A+  I
Sbjct: 328 FISFLSVLYACSHAGLVEKGREYF-SLMRDYGIEPETEHYASLVDLLGRAGKLQEAVSVI 386

Query: 573 KGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYL 632
           K + + P  +VWGALL  C IHKDT +A   ++++ E+D  + G HVLLSN Y+A   Y 
Sbjct: 387 KQMPMRPTESVWGALLTGCRIHKDTEMAAFVADRILEMDSSSSGLHVLLSNAYAAAGRYE 446

Query: 633 QAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAG 692
           +AA +R++++ R + K  G + +E G   H FT+GD+ H +   IY  LE+L  +M +AG
Sbjct: 447 EAARMRKMLRDRGVKKETGLSWVEEGNKVHTFTAGDRSHAKWVEIYEKLEELEEEMEKAG 506

Query: 693 FQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATK 752
           +  +T   L  V+ EEK   ++ HSE+LAIAFGLI   PG  IR++KNLRVC DCH A K
Sbjct: 507 YVADTSFVLRAVDGEEKNETIRYHSERLAIAFGLITFPPGRPIRVMKNLRVCGDCHAAIK 566

Query: 753 FISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           F+SK  GRV++VRD NRFH F+ G CSCGDYW
Sbjct: 567 FMSKCCGRVLIVRDNNRFHRFEDGKCSCGDYW 598



 Score =  172 bits (437), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 122/422 (28%), Positives = 201/422 (47%), Gaps = 6/422 (1%)

Query: 127 GVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMK 186
           G+ LH H +  G  +   V   L++LY K      + +VFD+ P+K +  W+S+IS   +
Sbjct: 44  GLQLHAHILKFGLQTIPLVSHNLINLYSKTQLPLFSLQVFDETPKKSSTTWSSVISAFAQ 103

Query: 187 NCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVY 246
           N     ++  F  M+ N G   D     +   A   ++   +G  + CL +K G++  V+
Sbjct: 104 NEAPLLALQFFRRML-NDGVRPDDHIYPSATKACGFLRRSDVGKSVHCLAVKTGYYCDVF 162

Query: 247 VLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASA 306
           V + LV  Y+KCGE+  A  LF ++   +++S + MI GY        +L LF+Q L   
Sbjct: 163 VGSSLVDMYAKCGEIGDARHLFDEMPERNVVSWSGMIYGYAQLDDGVEALTLFKQALIED 222

Query: 307 ERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAAR 366
             VN  T   +I V      L L   IH  CLK    S+S V +AL ++YS+   +E A 
Sbjct: 223 VDVNDFTFSSVIRVCSSSTFLELGKLIHGLCLKMSFDSSSFVGSALISLYSKCGVIEGAY 282

Query: 367 KLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLG 426
           ++FDE   ++L  WN+M+    Q+  T+    LF+EM    + PN ++  S+L AC+  G
Sbjct: 283 QVFDEIPTRNLGLWNSMLIACAQHAHTQRVFGLFEEMGNVGMKPNFISFLSVLYACSHAG 342

Query: 427 AISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHK-SEVTWNTMI 485
            +  G+    L++    E       +L+D+  + G + EA  +   M  + +E  W  ++
Sbjct: 343 LVEKGREYFSLMRDYGIEPETEHYASLVDLLGRAGKLQEAVSVIKQMPMRPTESVWGALL 402

Query: 486 SGYGLHGHGLEALQLFSEMLHSGIRPSGV-TFLSVLYACSHAGLVREGDEIFQSMIHDHG 544
           +G  +H     A  +   +L      SG+   LS  YA   AG   E   + + M+ D G
Sbjct: 403 TGCRIHKDTEMAAFVADRILEMDSSSSGLHVLLSNAYAA--AGRYEEAARM-RKMLRDRG 459

Query: 545 FK 546
            K
Sbjct: 460 VK 461



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 103/395 (26%), Positives = 178/395 (45%), Gaps = 18/395 (4%)

Query: 10  NLFLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRL----SDFKATCYARALFF 65
           NL LS  + +++  Q  Q HA I+  G Q    T+  ++H L    S  +   ++  +F 
Sbjct: 30  NLLLSFTR-SRSLRQGLQLHAHILKFGLQ----TIPLVSHNLINLYSKTQLPLFSLQVFD 84

Query: 66  SIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRS 125
             PK     ++ +I  F+ NE P  ++ F+  +  N  + PD+  Y     A        
Sbjct: 85  ETPKKSSTTWSSVISAFAQNEAPLLALQFFRRML-NDGVRPDDHIYPSATKACGFLRRSD 143

Query: 126 IGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLM 185
           +G  +H  A+ +GY  D+FVG++LVD+Y K   +  AR +FD+MPE++ V W+ MI G  
Sbjct: 144 VGKSVHCLAVKTGYYCDVFVGSSLVDMYAKCGEIGDARHLFDEMPERNVVSWSGMIYGYA 203

Query: 186 KNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHV 245
           +     +++ +F   +       D T  ++V+   +    L LG  I  L LK+ F    
Sbjct: 204 QLDDGVEALTLFKQALIEDVDVNDFT-FSSVIRVCSSSTFLELGKLIHGLCLKMSFDSSS 262

Query: 246 YVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLAS 305
           +V + L+S YSKCG +E A  +F +I   +L   N+M+     +  T+    LF ++   
Sbjct: 263 FVGSALISLYSKCGVIEGAYQVFDEIPTRNLGLWNSMLIACAQHAHTQRVFGLFEEMGNV 322

Query: 306 AERVNSSTIVGLIPVFYPFGHLHLTNC---IHSFCLKSGIVSNSSVLTALSTVYSRLNEM 362
             + N    +  + V Y   H  L        S     GI   +    +L  +  R  ++
Sbjct: 323 GMKPN---FISFLSVLYACSHAGLVEKGREYFSLMRDYGIEPETEHYASLVDLLGRAGKL 379

Query: 363 EAARKLFDESSEKSLAS-WNAMIAGYTQNGLTEEA 396
           + A  +  +   +   S W A++ G   +  TE A
Sbjct: 380 QEAVSVIKQMPMRPTESVWGALLTGCRIHKDTEMA 414


>gi|225466163|ref|XP_002263755.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Vitis vinifera]
          Length = 624

 Score =  410 bits (1054), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 219/560 (39%), Positives = 311/560 (55%), Gaps = 31/560 (5%)

Query: 256 SKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIV 315
           SK G++  A  +F  I  PD    N +  GY       + + ++ ++L  +   N  T  
Sbjct: 65  SKSGDLNYALEVFDKIPHPDAYIYNTIFRGYLRWQLARNCIFMYSRMLHKSVSPNKFTYP 124

Query: 316 GLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESS-- 373
            LI        +     IH+  LK G  ++   L  L  +Y     +E AR++FD     
Sbjct: 125 PLIRACCIDYAIEEGKQIHAHVLKFGFGADGFSLNNLIHMYVNFQSLEQARRVFDNMPQR 184

Query: 374 -----------------------------EKSLASWNAMIAGYTQNGLTEEAISLFQEMQ 404
                                        E++  SWNAMIA Y Q+    EA +LF  M+
Sbjct: 185 DVVSWTSLITGYSQWGFVDKAREVFELMPERNSVSWNAMIAAYVQSNRLHEAFALFDRMR 244

Query: 405 ASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIV 464
              V  +    +S+LSAC  LGA+  GKW+H  ++    E +  ++T +IDMY KCG + 
Sbjct: 245 LENVVLDKFVAASMLSACTGLGALEQGKWIHGYIEKSGIELDSKLATTVIDMYCKCGCLE 304

Query: 465 EARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACS 524
           +A E+F+ +  K   +WN MI G  +HG G  A++LF EM    + P G+TF++VL AC+
Sbjct: 305 KASEVFNELPQKGISSWNCMIGGLAMHGKGEAAIELFKEMEREMVAPDGITFVNVLSACA 364

Query: 525 HAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVW 584
           H+GLV EG   FQ M    G KP  EH+ CMVD+LGRAG LE+A + I  + V P   V 
Sbjct: 365 HSGLVEEGKHYFQYMTEVLGLKPGMEHFGCMVDLLGRAGLLEEARKLINEMPVNPDAGVL 424

Query: 585 GALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKR 644
           GAL+GAC IH +T L     +K+ EL+P N G +VLL+N+Y++   +   A VR+++  R
Sbjct: 425 GALVGACRIHGNTELGEQIGKKVIELEPHNSGRYVLLANLYASAGRWEDVAKVRKLMNDR 484

Query: 645 KLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDV 704
            + KAPG ++IE       F +G + HPQ+  IYA L+++   +R  G+  +T   LHD+
Sbjct: 485 GVKKAPGFSMIESESGVDEFIAGGRAHPQAKEIYAKLDEILETIRSIGYVPDTDGVLHDI 544

Query: 705 EEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVV 764
           +EEEKE  +  HSEKLAIAFGL+ T+PG  +RI KNLR+C DCH A+K ISKV  R I++
Sbjct: 545 DEEEKENPLYYHSEKLAIAFGLLKTKPGETLRISKNLRICRDCHQASKLISKVYDREIII 604

Query: 765 RDANRFHHFKGGVCSCGDYW 784
           RD NRFHHF+ G CSC DYW
Sbjct: 605 RDRNRFHHFRMGGCSCKDYW 624



 Score =  142 bits (358), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 139/580 (23%), Positives = 243/580 (41%), Gaps = 93/580 (16%)

Query: 2   SMKTPQSRNLFLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAH--RLSDFKATCY 59
           S+ + ++  L L  L    T ++L Q H+QII  G   D   + ++     +S      Y
Sbjct: 13  SLSSAKAHKLPLYGLDSCSTMAELKQYHSQIIRLGLSADNDAMGRVIKFCAISKSGDLNY 72

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           A  +F  IP PD +++N I RG+   ++ ++ I  Y+ +  + +++P+ FTY  ++ A  
Sbjct: 73  ALEVFDKIPHPDAYIYNTIFRGYLRWQLARNCIFMYSRML-HKSVSPNKFTYPPLIRAC- 130

Query: 120 ACCDRSI--GVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLW 177
            C D +I  G  +H H +  G+G+D F    L+ +Y  F  ++ AR+VFD MP++D V W
Sbjct: 131 -CIDYAIEEGKQIHAHVLKFGFGADGFSLNNLIHMYVNFQSLEQARRVFDNMPQRDVVSW 189

Query: 178 NSMISGLMKNCCFQDSIWVFGDMV-RNGGTW----------------------------- 207
            S+I+G  +      +  VF  M  RN  +W                             
Sbjct: 190 TSLITGYSQWGFVDKAREVFELMPERNSVSWNAMIAAYVQSNRLHEAFALFDRMRLENVV 249

Query: 208 LDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELL 267
           LD    A++L A   +  L  G  I     K G      + T ++  Y KCG +E+A  +
Sbjct: 250 LDKFVAASMLSACTGLGALEQGKWIHGYIEKSGIELDSKLATTVIDMYCKCGCLEKASEV 309

Query: 268 FRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHL 327
           F ++ +  + S N MI G   +GK E+++ LF+++       +  T V +          
Sbjct: 310 FNELPQKGISSWNCMIGGLAMHGKGEAAIELFKEMEREMVAPDGITFVNV---------- 359

Query: 328 HLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGY 387
            L+ C HS  ++ G              +  + E+   +          +  +  M+   
Sbjct: 360 -LSACAHSGLVEEG-----------KHYFQYMTEVLGLK--------PGMEHFGCMVDLL 399

Query: 388 TQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWV-HELVKSRNFESN 446
            + GL EEA  L  EM    V P+   + +++ AC   G   LG+ +  ++++     S 
Sbjct: 400 GRAGLLEEARKLINEM---PVNPDAGVLGALVGACRIHGNTELGEQIGKKVIELEPHNSG 456

Query: 447 IYVSTALIDMYAKCGNIVEARELFDLMSHK------------SEVTWNTMISGYGLHGHG 494
            YV   L ++YA  G   +  ++  LM+ +            SE   +  I+G   H   
Sbjct: 457 RYV--LLANLYASAGRWEDVAKVRKLMNDRGVKKAPGFSMIESESGVDEFIAGGRAHPQA 514

Query: 495 LEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDE 534
            E      E+L         T  S+ Y     G++ + DE
Sbjct: 515 KEIYAKLDEILE--------TIRSIGYVPDTDGVLHDIDE 546


>gi|225464746|ref|XP_002265138.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
           chloroplastic [Vitis vinifera]
          Length = 825

 Score =  410 bits (1054), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 234/650 (36%), Positives = 372/650 (57%), Gaps = 11/650 (1%)

Query: 53  DFKATCYARALFFSIPKPDLFLFNVIIRGFSNNE-MPKSSICFYTHLRKNTALTPDNFTY 111
           DF      R +F ++ K ++  +N +I  +   E + ++   F T +R     TP +F  
Sbjct: 164 DFNNCDLVRRVFDTMRKRNVVAWNTMISWYVKTERLIEAFKMFRTMMRMGIRPTPVSFVN 223

Query: 112 SFVLSAASACCDRSIGVLLHGHAIVSG--YGSDLFVGAALVDLYFKFSWVKSARKVFDKM 169
            F   A     D     +L+G  +  G  +  D FV ++ + +Y +   V  AR++FD  
Sbjct: 224 VF--PAVWRMSDYDNANVLYGLVVKLGSDFVDDFFVVSSAIFMYAELGCVDFAREIFDCC 281

Query: 170 PEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLG 229
            E++T +WN+MI G ++N C  ++I +F  ++ +    LD  +  + L A++++Q L LG
Sbjct: 282 LERNTEVWNTMIGGYVQNNCPIEAIDLFVQVMESEQFVLDDVTFLSALTAISQLQWLELG 341

Query: 230 MEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCN 289
            ++    LK      V +L  ++  YS+CG +  +  +F +++  D+++ N M+S +  N
Sbjct: 342 RQLHAYILKSSTILQVVILNAIIVMYSRCGSIGTSFKVFSNMLERDVVTWNTMVSAFVQN 401

Query: 290 GKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVL 349
           G  +  L L   +      V+S T+  L+ +        +    H++ ++ GI     + 
Sbjct: 402 GLDDEGLMLVFAMQKQGFMVDSVTLTALLSLASNLRSQEIGKQAHAYLIRHGI-QFEGMD 460

Query: 350 TALSTVYSRLNEMEAARKLFDESSE--KSLASWNAMIAGYTQNGLTEEAISLFQEMQASK 407
           + L  +Y++   +  A++LF+++S+  +  A+WNAMIAGYTQNGL+EE  ++F++M    
Sbjct: 461 SYLIDMYAKSGLITTAQQLFEKNSDYDRDEATWNAMIAGYTQNGLSEEGFAVFRKMIEQN 520

Query: 408 VAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEAR 467
           V PN VT++SIL AC  +G I LGK +H          N++V TAL+DMY+K G I  A 
Sbjct: 521 VRPNAVTLASILPACNPMGTIGLGKQIHGFAIRCFLNRNVFVGTALLDMYSKSGAITYAE 580

Query: 468 ELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAG 527
            +F     K+ VT+ TMIS YG HG G  AL LF  ML SGI+P  VTF+++L ACS+AG
Sbjct: 581 NVFAETLEKNSVTYTTMISSYGQHGMGERALSLFHAMLGSGIKPDSVTFVAILSACSYAG 640

Query: 528 LVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGP-AVWGA 586
           LV EG  IFQSM  ++  +P AEHY C+ D+LGR G++ +A EF+KGL  E     +WG+
Sbjct: 641 LVDEGLRIFQSMEREYKIQPSAEHYCCVADMLGRVGRVVEAYEFVKGLGEEGNTFGIWGS 700

Query: 587 LLGACMIHKDTNLARVASEKLFELDPEN--VGYHVLLSNIYSAERDYLQAATVRQVVKKR 644
           LLGAC IH +  L +V + KL E++  +   GYHVLLSNIY+AE ++     VR+ ++++
Sbjct: 701 LLGACRIHGEFELGKVVANKLLEMEKGSSLTGYHVLLSNIYAAEGNWDNVDRVRKEMRQK 760

Query: 645 KLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQ 694
            L K  GC+ +EV G  + F S D  HPQ   IY MLEKL  +M++AG++
Sbjct: 761 GLMKEAGCSWVEVAGHVNCFMSRDHKHPQCAEIYQMLEKLAMEMKDAGYK 810



 Score =  229 bits (583), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 167/582 (28%), Positives = 271/582 (46%), Gaps = 57/582 (9%)

Query: 63  LFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACC 122
           LF SIP+P   L+N II GF  N MP  ++ FY  +R + +   D++T+S  L A +   
Sbjct: 59  LFDSIPRPTTVLWNTIIIGFICNNMPIDALLFYARMRASPSPKFDSYTFSSTLKACAQAR 118

Query: 123 DRSIGVLLHGHAIVSGYGSDLFVGAALVDLY-------------FKFSWVKSARKVFDKM 169
              +G  LH H + S +GS   V  +L+++Y             + F+     R+VFD M
Sbjct: 119 SLKLGKALHCHVLRSHFGSSRIVYNSLLNMYSTCLTEVPYLGTAYDFNNCDLVRRVFDTM 178

Query: 170 PEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLG 229
            +++ V WN+MIS  +K     ++  +F  M+R  G      S   V PAV  + +    
Sbjct: 179 RKRNVVAWNTMISWYVKTERLIEAFKMFRTMMRM-GIRPTPVSFVNVFPAVWRMSDYDNA 237

Query: 230 MEIQCLGLKLG--FHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYT 287
             +  L +KLG  F D  +V++  +  Y++ G V+ A  +F   +  +    N MI GY 
Sbjct: 238 NVLYGLVVKLGSDFVDDFFVVSSAIFMYAELGCVDFAREIFDCCLERNTEVWNTMIGGYV 297

Query: 288 CNGKTESSLRLFRQLLASAERV-NSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNS 346
            N     ++ LF Q++ S + V +  T +  +        L L   +H++ LKS  +   
Sbjct: 298 QNNCPIEAIDLFVQVMESEQFVLDDVTFLSALTAISQLQWLELGRQLHAYILKSSTILQV 357

Query: 347 SVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQAS 406
            +L A+  +YSR   +  + K+F    E+ + +WN M++ + QNGL +E + L   MQ  
Sbjct: 358 VILNAIIVMYSRCGSIGTSFKVFSNMLERDVVTWNTMVSAFVQNGLDDEGLMLVFAMQKQ 417

Query: 407 KVAPNPVTVSSILSACAQLGAISLGKWVHELVKSR--NFESNIYVSTALIDMYAKCGNIV 464
               + VT++++LS  + L +  +GK  H  +      FE    + + LIDMYAK G I 
Sbjct: 418 GFMVDSVTLTALLSLASNLRSQEIGKQAHAYLIRHGIQFEG---MDSYLIDMYAKSGLIT 474

Query: 465 EARELFDLMS--HKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYA 522
            A++LF+  S   + E TWN MI+GY  +G   E   +F +M+   +RP+ VT  S+L A
Sbjct: 475 TAQQLFEKNSDYDRDEATWNAMIAGYTQNGLSEEGFAVFRKMIEQNVRPNAVTLASILPA 534

Query: 523 CSHAGLVREGDEI------------------FQSMIHDHGFKPLAEH------------Y 552
           C+  G +  G +I                     M    G    AE+            Y
Sbjct: 535 CNPMGTIGLGKQIHGFAIRCFLNRNVFVGTALLDMYSKSGAITYAENVFAETLEKNSVTY 594

Query: 553 ACMVDILGRAGQLEKALEFIK---GLAVEPGPAVWGALLGAC 591
             M+   G+ G  E+AL       G  ++P    + A+L AC
Sbjct: 595 TTMISSYGQHGMGERALSLFHAMLGSGIKPDSVTFVAILSAC 636



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 119/462 (25%), Positives = 223/462 (48%), Gaps = 9/462 (1%)

Query: 37  FQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYT 96
           F +D   V+      ++     +AR +F    + +  ++N +I G+  N  P  +I  + 
Sbjct: 251 FVDDFFVVSSAIFMYAELGCVDFAREIFDCCLERNTEVWNTMIGGYVQNNCPIEAIDLFV 310

Query: 97  HLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKF 156
            + ++     D+ T+   L+A S      +G  LH + + S     + +  A++ +Y + 
Sbjct: 311 QVMESEQFVLDDVTFLSALTAISQLQWLELGRQLHAYILKSSTILQVVILNAIIVMYSRC 370

Query: 157 SWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAV 216
             + ++ KVF  M E+D V WN+M+S  ++N    + + +   M + G   +DS ++ A+
Sbjct: 371 GSIGTSFKVFSNMLERDVVTWNTMVSAFVQNGLDDEGLMLVFAMQKQGFM-VDSVTLTAL 429

Query: 217 LPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFR---DIVR 273
           L   + ++   +G +     ++ G      + + L+  Y+K G +  A+ LF    D  R
Sbjct: 430 LSLASNLRSQEIGKQAHAYLIRHGIQFEG-MDSYLIDMYAKSGLITTAQQLFEKNSDYDR 488

Query: 274 PDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCI 333
            D  + NAMI+GYT NG +E    +FR+++    R N+ T+  ++P   P G + L   I
Sbjct: 489 -DEATWNAMIAGYTQNGLSEEGFAVFRKMIEQNVRPNAVTLASILPACNPMGTIGLGKQI 547

Query: 334 HSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLT 393
           H F ++  +  N  V TAL  +YS+   +  A  +F E+ EK+  ++  MI+ Y Q+G+ 
Sbjct: 548 HGFAIRCFLNRNVFVGTALLDMYSKSGAITYAENVFAETLEKNSVTYTTMISSYGQHGMG 607

Query: 394 EEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLG-KWVHELVKSRNFESNIYVSTA 452
           E A+SLF  M  S + P+ VT  +ILSAC+  G +  G +    + +    + +      
Sbjct: 608 ERALSLFHAMLGSGIKPDSVTFVAILSACSYAGLVDEGLRIFQSMEREYKIQPSAEHYCC 667

Query: 453 LIDMYAKCGNIVEARELFDLMSHKSEV--TWNTMISGYGLHG 492
           + DM  + G +VEA E    +  +      W +++    +HG
Sbjct: 668 VADMLGRVGRVVEAYEFVKGLGEEGNTFGIWGSLLGACRIHG 709



 Score =  162 bits (411), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 120/457 (26%), Positives = 211/457 (46%), Gaps = 41/457 (8%)

Query: 162 ARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVA 221
           A  +FD +P   TVLWN++I G + N    D++  +  M  +     DS + ++ L A A
Sbjct: 56  ALHLFDSIPRPTTVLWNTIIIGFICNNMPIDALLFYARMRASPSPKFDSYTFSSTLKACA 115

Query: 222 EVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKC-------------GEVERAELLF 268
           + + L+LG  + C  L+  F     V   L++ YS C                +    +F
Sbjct: 116 QARSLKLGKALHCHVLRSHFGSSRIVYNSLLNMYSTCLTEVPYLGTAYDFNNCDLVRRVF 175

Query: 269 RDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLH 328
             + + ++++ N MIS Y    +   + ++FR ++    R    + V + P  +      
Sbjct: 176 DTMRKRNVVAWNTMISWYVKTERLIEAFKMFRTMMRMGIRPTPVSFVNVFPAVWRMSDYD 235

Query: 329 LTNCIHSFCLKSG--IVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAG 386
             N ++   +K G   V +  V+++   +Y+ L  ++ AR++FD   E++   WN MI G
Sbjct: 236 NANVLYGLVVKLGSDFVDDFFVVSSAIFMYAELGCVDFAREIFDCCLERNTEVWNTMIGG 295

Query: 387 YTQNGLTEEAISLF-QEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFES 445
           Y QN    EAI LF Q M++ +   + VT  S L+A +QL  + LG+ +H  +   +   
Sbjct: 296 YVQNNCPIEAIDLFVQVMESEQFVLDDVTFLSALTAISQLQWLELGRQLHAYILKSSTIL 355

Query: 446 NIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEML 505
            + +  A+I MY++CG+I  + ++F  M  +  VTWNTM+S +  +G   E L L   M 
Sbjct: 356 QVVILNAIIVMYSRCGSIGTSFKVFSNMLERDVVTWNTMVSAFVQNGLDDEGLMLVFAMQ 415

Query: 506 HSGIRPSGVTFLSVLYACS-----------HAGLVREGDEIFQSMIHDHGFKPLAEHYAC 554
             G     VT  ++L   S           HA L+R G + F+ M          + Y  
Sbjct: 416 KQGFMVDSVTLTALLSLASNLRSQEIGKQAHAYLIRHGIQ-FEGM----------DSY-- 462

Query: 555 MVDILGRAGQLEKALE-FIKGLAVEPGPAVWGALLGA 590
           ++D+  ++G +  A + F K    +   A W A++  
Sbjct: 463 LIDMYAKSGLITTAQQLFEKNSDYDRDEATWNAMIAG 499



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 79/294 (26%), Positives = 135/294 (45%), Gaps = 17/294 (5%)

Query: 259 GEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLAS-AERVNSSTIVGL 317
           G   +A  LF  I RP  +  N +I G+ CN     +L  + ++ AS + + +S T    
Sbjct: 51  GHPHQALHLFDSIPRPTTVLWNTIIIGFICNNMPIDALLFYARMRASPSPKFDSYTFSST 110

Query: 318 IPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSR-------------LNEMEA 364
           +        L L   +H   L+S   S+  V  +L  +YS               N  + 
Sbjct: 111 LKACAQARSLKLGKALHCHVLRSHFGSSRIVYNSLLNMYSTCLTEVPYLGTAYDFNNCDL 170

Query: 365 ARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQ 424
            R++FD   ++++ +WN MI+ Y +     EA  +F+ M    + P PV+  ++  A  +
Sbjct: 171 VRRVFDTMRKRNVVAWNTMISWYVKTERLIEAFKMFRTMMRMGIRPTPVSFVNVFPAVWR 230

Query: 425 LGAISLGKWVHELVKS--RNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWN 482
           +        ++ LV     +F  + +V ++ I MYA+ G +  ARE+FD    ++   WN
Sbjct: 231 MSDYDNANVLYGLVVKLGSDFVDDFFVVSSAIFMYAELGCVDFAREIFDCCLERNTEVWN 290

Query: 483 TMISGYGLHGHGLEALQLFSEMLHS-GIRPSGVTFLSVLYACSHAGLVREGDEI 535
           TMI GY  +   +EA+ LF +++ S       VTFLS L A S    +  G ++
Sbjct: 291 TMIGGYVQNNCPIEAIDLFVQVMESEQFVLDDVTFLSALTAISQLQWLELGRQL 344



 Score = 63.2 bits (152), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 56/236 (23%), Positives = 103/236 (43%), Gaps = 31/236 (13%)

Query: 12  FLSLLKGAKTQSQLTQTHAQIIIHGFQND---------------LSTVTKLAHRLSDFKA 56
            LSL    ++Q    Q HA +I HG Q +               ++T  +L  + SD+  
Sbjct: 429 LLSLASNLRSQEIGKQAHAYLIRHGIQFEGMDSYLIDMYAKSGLITTAQQLFEKNSDYDR 488

Query: 57  TCYARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLS 116
                         D   +N +I G++ N + +     +  + +   + P+  T + +L 
Sbjct: 489 --------------DEATWNAMIAGYTQNGLSEEGFAVFRKMIEQN-VRPNAVTLASILP 533

Query: 117 AASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVL 176
           A +      +G  +HG AI      ++FVG AL+D+Y K   +  A  VF +  EK++V 
Sbjct: 534 ACNPMGTIGLGKQIHGFAIRCFLNRNVFVGTALLDMYSKSGAITYAENVFAETLEKNSVT 593

Query: 177 WNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEI 232
           + +MIS   ++   + ++ +F  M+   G   DS +  A+L A +    +  G+ I
Sbjct: 594 YTTMISSYGQHGMGERALSLFHAML-GSGIKPDSVTFVAILSACSYAGLVDEGLRI 648


>gi|224060371|ref|XP_002300166.1| predicted protein [Populus trichocarpa]
 gi|222847424|gb|EEE84971.1| predicted protein [Populus trichocarpa]
          Length = 719

 Score =  410 bits (1054), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 235/662 (35%), Positives = 354/662 (53%), Gaps = 49/662 (7%)

Query: 130 LHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCC 189
           +H   I+    S   +   L+        +  +  VF+    K+   +N++I GL  N  
Sbjct: 100 IHAQIIIHNLSSSSLITTQLISSSSLRKSINHSLAVFNHHKPKNLFTFNALIRGLTTNSH 159

Query: 190 FQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLT 249
           F ++I+ F  M+R+G    D  +   VL ++A +    LGM I C+ L+ G     +V  
Sbjct: 160 FFNAIFHFRLMLRSG-IKPDRLTYPFVLKSMAGLFSTELGMAIHCMILRCGIELDSFVRV 218

Query: 250 GLVSFYSKCGEVERAELLFRDIVRPDLISC-------NAMISGYTCNGKTESSLRLFRQL 302
            LV  Y K  ++  A  +F +   P+           N +I G    G  + +++LF+ +
Sbjct: 219 SLVDMYVKVEKLGSAFKVFDE--SPERFDSGSSALLWNVLIKGCCKAGSMKKAVKLFKAM 276

Query: 303 LASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEM 362
               E V+ ST++                         G   N               +M
Sbjct: 277 -PKKENVSWSTLI------------------------DGFAKN--------------GDM 297

Query: 363 EAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSAC 422
           + A +LFD+  EK++ SW  M+ G+++NG +E+A+S+F +M    V PN  T+ S LSAC
Sbjct: 298 DRAMELFDQMPEKNVVSWTTMVDGFSRNGDSEKALSMFSKMLEEGVRPNAFTIVSALSAC 357

Query: 423 AQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWN 482
           A++G +  G  +H+ +K         + TAL+DMYAKCGNI  A E+F     KS  TW 
Sbjct: 358 AKIGGLEAGLRIHKYIKDNGLHLTEALGTALVDMYAKCGNIESASEVFGETEQKSIRTWT 417

Query: 483 TMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHD 542
            MI G+ +HGH  +A+  F +M+ +GI+P  V FL++L AC H+G V  G   F SM  D
Sbjct: 418 VMIWGWAIHGHSEQAIACFKQMMFAGIKPDEVVFLALLTACMHSGQVDIGLNFFDSMRLD 477

Query: 543 HGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARV 602
           +  +P  +HY  +VD+LGR+GQL++AL FI+ + + P   +WGAL  AC  HK T +A+ 
Sbjct: 478 YCIEPSMKHYTLIVDMLGRSGQLKEALRFIERMPMNPDFVIWGALFCACRAHKKTKMAKF 537

Query: 603 ASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPH 662
           A  KL +L+P + G ++ LSN Y+A   +  A  VR +++ R + K  G + IEV G  H
Sbjct: 538 ALNKLLKLEPTHTGNYIFLSNAYAALGQWEDAERVRVLMQNRGVHKNSGWSCIEVEGQVH 597

Query: 663 VFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAI 722
            F SGD  H  S AI   LE++     + G+   T   LH++E+EEKE ++  H EKLA+
Sbjct: 598 RFVSGDHDHKDSKAICLKLEEIMAGAVKQGYIPGTEWVLHNMEQEEKEDVLGSHGEKLAL 657

Query: 723 AFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGD 782
           AF LI T PG  IRI+KNL+VC DCH+  K+ SK++ R I++RD  RFHHFK G CSC D
Sbjct: 658 AFALICTSPGMTIRIVKNLQVCGDCHSLMKYASKISQREIMLRDMKRFHHFKDGSCSCRD 717

Query: 783 YW 784
           +W
Sbjct: 718 HW 719



 Score =  195 bits (495), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 133/487 (27%), Positives = 230/487 (47%), Gaps = 48/487 (9%)

Query: 12  FLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPD 71
           F+SL+ G+KT  QL Q HAQIIIH   +     T+L    S  K+  ++ A+F      +
Sbjct: 84  FISLIHGSKTILQLHQIHAQIIIHNLSSSSLITTQLISSSSLRKSINHSLAVFNHHKPKN 143

Query: 72  LFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLH 131
           LF FN +IRG + N    ++I F+  L   + + PD  TY FVL + +      +G+ +H
Sbjct: 144 LFTFNALIRGLTTNSHFFNAI-FHFRLMLRSGIKPDRLTYPFVLKSMAGLFSTELGMAIH 202

Query: 132 GHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEK-----DTVLWNSMISGLMK 186
              +  G   D FV  +LVD+Y K   + SA KVFD+ PE+       +LWN +I G   
Sbjct: 203 CMILRCGIELDSFVRVSLVDMYVKVEKLGSAFKVFDESPERFDSGSSALLWNVLIKG--- 259

Query: 187 NCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVY 246
            CC               G+   +  +   +P    V                       
Sbjct: 260 -CC-------------KAGSMKKAVKLFKAMPKKENVS---------------------- 283

Query: 247 VLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASA 306
             + L+  ++K G+++RA  LF  +   +++S   M+ G++ NG +E +L +F ++L   
Sbjct: 284 -WSTLIDGFAKNGDMDRAMELFDQMPEKNVVSWTTMVDGFSRNGDSEKALSMFSKMLEEG 342

Query: 307 ERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAAR 366
            R N+ TIV  +      G L     IH +   +G+    ++ TAL  +Y++   +E+A 
Sbjct: 343 VRPNAFTIVSALSACAKIGGLEAGLRIHKYIKDNGLHLTEALGTALVDMYAKCGNIESAS 402

Query: 367 KLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLG 426
           ++F E+ +KS+ +W  MI G+  +G +E+AI+ F++M  + + P+ V   ++L+AC   G
Sbjct: 403 EVFGETEQKSIRTWTVMIWGWAIHGHSEQAIACFKQMMFAGIKPDEVVFLALLTACMHSG 462

Query: 427 AISLG-KWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSE-VTWNTM 484
            + +G  +   +      E ++   T ++DM  + G + EA    + M    + V W  +
Sbjct: 463 QVDIGLNFFDSMRLDYCIEPSMKHYTLIVDMLGRSGQLKEALRFIERMPMNPDFVIWGAL 522

Query: 485 ISGYGLH 491
                 H
Sbjct: 523 FCACRAH 529



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 55/246 (22%), Positives = 107/246 (43%), Gaps = 4/246 (1%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           A  LF  +P+ ++  +  ++ GFS N   + ++  ++ + +   + P+ FT    LSA +
Sbjct: 300 AMELFDQMPEKNVVSWTTMVDGFSRNGDSEKALSMFSKMLEE-GVRPNAFTIVSALSACA 358

Query: 120 ACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNS 179
                  G+ +H +   +G      +G ALVD+Y K   ++SA +VF +  +K    W  
Sbjct: 359 KIGGLEAGLRIHKYIKDNGLHLTEALGTALVDMYAKCGNIESASEVFGETEQKSIRTWTV 418

Query: 180 MISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGME-IQCLGLK 238
           MI G   +   + +I  F  M+   G   D     A+L A     ++ +G+     + L 
Sbjct: 419 MIWGWAIHGHSEQAIACFKQMMF-AGIKPDEVVFLALLTACMHSGQVDIGLNFFDSMRLD 477

Query: 239 LGFHDHVYVLTGLVSFYSKCGEVERA-ELLFRDIVRPDLISCNAMISGYTCNGKTESSLR 297
                 +   T +V    + G+++ A   + R  + PD +   A+      + KT+ +  
Sbjct: 478 YCIEPSMKHYTLIVDMLGRSGQLKEALRFIERMPMNPDFVIWGALFCACRAHKKTKMAKF 537

Query: 298 LFRQLL 303
              +LL
Sbjct: 538 ALNKLL 543


>gi|302820671|ref|XP_002992002.1| hypothetical protein SELMODRAFT_134463 [Selaginella moellendorffii]
 gi|300140244|gb|EFJ06970.1| hypothetical protein SELMODRAFT_134463 [Selaginella moellendorffii]
          Length = 620

 Score =  410 bits (1054), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 230/616 (37%), Positives = 334/616 (54%), Gaps = 36/616 (5%)

Query: 205 GTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERA 264
           GT  D       L A A   EL  G +I    +  G   ++ +   LV+ Y KC +V  A
Sbjct: 5   GTRPDKVVFVIALDACAASGELDHGRQIHSSVVDSGLTSNIIISNSLVNMYGKCQDVPCA 64

Query: 265 E-----LLFRDIV--------------------------RPDLISCNAMISGYTCNGKTE 293
           E     +L RD+V                          R D +S NA+I+    N K +
Sbjct: 65  EKVFDGMLLRDVVSWTAMLAVYAQNGCWSQALHVFEAMPRKDDVSWNAVINASVGNSKFQ 124

Query: 294 SSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVL-TAL 352
            +L LF  +     R N  T++ L+        L L   IH+     G   NS+ +  ++
Sbjct: 125 DALELFHGMELEGLRSNEFTLLSLLEACGGLEDLKLARQIHARAAAGGFGGNSTAVGNSV 184

Query: 353 STVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQ--NGLTEEAISLFQEMQASKVAP 410
             +Y+R   +   +K FD   EK L +W+ M+A Y Q  +G    A   FQEM+A  + P
Sbjct: 185 VNMYARCGSLLDTKKAFDSLEEKGLVAWSIMLAAYAQSKDGSGRRAFKFFQEMEAEGIKP 244

Query: 411 NPVTVSSILSACAQLGAISLGKWVHELVKSRNF-ESNIYVSTALIDMYAKCGNIVEAREL 469
             VT  S L ACA +  +  G+ +H    +  F E+++ +   +I+MY KCG+  +A+ +
Sbjct: 245 GEVTFVSALDACAAMATLEHGRSMHRRAAASGFVETSLVLGNTIINMYGKCGSPSDAKLV 304

Query: 470 FDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLV 529
           FD M  K  ++WN++I  Y  +GH LEAL    EML  G  P   T +S+LY  SHAGL+
Sbjct: 305 FDQMPEKCLISWNSLIVAYAHNGHALEALSSLQEMLLQGFDPDSGTSVSILYGLSHAGLL 364

Query: 530 REGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFI-KGLAVEPGPAVWGALL 588
             G E F+S I DHG +P +    C+VD+L R G L+ A E I    A +     W  LL
Sbjct: 365 ERGVEHFRSSIQDHGLEPSSGQLKCLVDLLARKGFLDAAEELILASPACQADTIAWMTLL 424

Query: 589 GACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAK 648
            AC  + D       +E++FEL+P++ G  V+L+N+Y++   +  A+ +R+++++  + K
Sbjct: 425 AACKSYGDPQRGIRCAERVFELEPQHSGSFVVLANLYASVGRWSDASRIRKMMERMSVKK 484

Query: 649 APGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEE 708
            PGC+ IE+ G+ H F SG+  HP+   I   LEKL  +MREAG+  +T   +HDVEE +
Sbjct: 485 EPGCSWIELSGSVHEFISGESKHPKIREICEELEKLTLRMREAGYVPDTTNVVHDVEEGD 544

Query: 709 KELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDAN 768
           KE ++  HSE+LAI FGL++T PG  IR++KNLRVC DCH ATK IS V GR IVVRD++
Sbjct: 545 KEEILSRHSERLAIVFGLMSTRPGETIRVVKNLRVCSDCHAATKIISSVVGREIVVRDSS 604

Query: 769 RFHHFKGGVCSCGDYW 784
           RFHHFK G CSCGD+W
Sbjct: 605 RFHHFKHGQCSCGDFW 620



 Score =  119 bits (297), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 119/464 (25%), Positives = 192/464 (41%), Gaps = 56/464 (12%)

Query: 106 PDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKV 165
           PD   +   L A +A  +   G  +H   + SG  S++ +  +LV++Y K   V  A KV
Sbjct: 8   PDKVVFVIALDACAASGELDHGRQIHSSVVDSGLTSNIIISNSLVNMYGKCQDVPCAEKV 67

Query: 166 FDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPA------ 219
           FD M  +D V W +M++   +N C+  ++ VF  M R      D  S  AV+ A      
Sbjct: 68  FDGMLLRDVVSWTAMLAVYAQNGCWSQALHVFEAMPRK-----DDVSWNAVINASVGNSK 122

Query: 220 VAEVQELRLGMEIQ---------------CLG---LKLGFHDH------------VYVLT 249
             +  EL  GME++               C G   LKL    H              V  
Sbjct: 123 FQDALELFHGMELEGLRSNEFTLLSLLEACGGLEDLKLARQIHARAAAGGFGGNSTAVGN 182

Query: 250 GLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGY--TCNGKTESSLRLFRQLLASAE 307
            +V+ Y++CG +   +  F  +    L++ + M++ Y  + +G    + + F+++ A   
Sbjct: 183 SVVNMYARCGSLLDTKKAFDSLEEKGLVAWSIMLAAYAQSKDGSGRRAFKFFQEMEAEGI 242

Query: 308 RVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVL-TALSTVYSRLNEMEAAR 366
           +    T V  +        L     +H     SG V  S VL   +  +Y +      A+
Sbjct: 243 KPGEVTFVSALDACAAMATLEHGRSMHRRAAASGFVETSLVLGNTIINMYGKCGSPSDAK 302

Query: 367 KLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLG 426
            +FD+  EK L SWN++I  Y  NG   EA+S  QEM      P+  T  SIL   +  G
Sbjct: 303 LVFDQMPEKCLISWNSLIVAYAHNGHALEALSSLQEMLLQGFDPDSGTSVSILYGLSHAG 362

Query: 427 AISLG-KWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELF--DLMSHKSEVTWNT 483
            +  G +     ++    E +      L+D+ A+ G +  A EL           + W T
Sbjct: 363 LLERGVEHFRSSIQDHGLEPSSGQLKCLVDLLARKGFLDAAEELILASPACQADTIAWMT 422

Query: 484 MISG---YGLHGHGLE-ALQLFS-EMLHSGIRPSGVTFLSVLYA 522
           +++    YG    G+  A ++F  E  HSG        L+ LYA
Sbjct: 423 LLAACKSYGDPQRGIRCAERVFELEPQHSG----SFVVLANLYA 462



 Score = 69.7 bits (169), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 84/352 (23%), Positives = 150/352 (42%), Gaps = 17/352 (4%)

Query: 58  CYARAL--FFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVL 115
           C+++AL  F ++P+ D   +N +I     N   + ++  + H  +   L  + FT   +L
Sbjct: 91  CWSQALHVFEAMPRKDDVSWNAVINASVGNSKFQDALELF-HGMELEGLRSNEFTLLSLL 149

Query: 116 SAASACCDRSIGVLLHGHAIVSGYGSD-LFVGAALVDLYFKFSWVKSARKVFDKMPEKDT 174
            A     D  +   +H  A   G+G +   VG ++V++Y +   +   +K FD + EK  
Sbjct: 150 EACGGLEDLKLARQIHARAAAGGFGGNSTAVGNSVVNMYARCGSLLDTKKAFDSLEEKGL 209

Query: 175 VLWNSMISGLM--KNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEI 232
           V W+ M++     K+   + +   F +M   G    + T V+A L A A +  L  G  +
Sbjct: 210 VAWSIMLAAYAQSKDGSGRRAFKFFQEMEAEGIKPGEVTFVSA-LDACAAMATLEHGRSM 268

Query: 233 QCLGLKLGFHDHVYVL-TGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGK 291
                  GF +   VL   +++ Y KCG    A+L+F  +    LIS N++I  Y  NG 
Sbjct: 269 HRRAAASGFVETSLVLGNTIINMYGKCGSPSDAKLVFDQMPEKCLISWNSLIVAYAHNGH 328

Query: 292 TESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHL----TNCIHSFCLKSGIVSNSS 347
              +L   +++L      +S T V    + Y   H  L         S     G+  +S 
Sbjct: 329 ALEALSSLQEMLLQGFDPDSGTSV---SILYGLSHAGLLERGVEHFRSSIQDHGLEPSSG 385

Query: 348 VLTALSTVYSRLNEMEAARKLF--DESSEKSLASWNAMIAGYTQNGLTEEAI 397
            L  L  + +R   ++AA +L     + +    +W  ++A     G  +  I
Sbjct: 386 QLKCLVDLLARKGFLDAAEELILASPACQADTIAWMTLLAACKSYGDPQRGI 437



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 41/137 (29%), Positives = 67/137 (48%), Gaps = 4/137 (2%)

Query: 403 MQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGN 462
           MQ     P+ V     L ACA  G +  G+ +H  V      SNI +S +L++MY KC +
Sbjct: 1   MQWEGTRPDKVVFVIALDACAASGELDHGRQIHSSVVDSGLTSNIIISNSLVNMYGKCQD 60

Query: 463 IVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYA 522
           +  A ++FD M  +  V+W  M++ Y  +G   +AL +F  M     R   V++ +V+ A
Sbjct: 61  VPCAEKVFDGMLLRDVVSWTAMLAVYAQNGCWSQALHVFEAM----PRKDDVSWNAVINA 116

Query: 523 CSHAGLVREGDEIFQSM 539
                  ++  E+F  M
Sbjct: 117 SVGNSKFQDALELFHGM 133


>gi|449442481|ref|XP_004139010.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g04840-like [Cucumis sativus]
 gi|449505311|ref|XP_004162432.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g04840-like [Cucumis sativus]
          Length = 679

 Score =  410 bits (1053), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 231/633 (36%), Positives = 347/633 (54%), Gaps = 50/633 (7%)

Query: 159 VKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWL---DSTSVAA 215
           V  A  +F +   K++ L+N++I GL +N  F+ SI  F  M++    W    D  +   
Sbjct: 90  VDYAISIFQRFELKNSYLFNALIRGLAENSRFESSISFFVLMLK----WKISPDRLTFPF 145

Query: 216 VLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRD----I 271
           VL + A +    +G  + C  LK G     +V   LV  Y K  E+  A  +F +    +
Sbjct: 146 VLKSAAALSNGGVGRALHCGILKFGLEFDSFVRVSLVDMYVKVEELGSALKVFDESPESV 205

Query: 272 VRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTN 331
               ++  N +I GY   G    +  LF  +        +S I G +             
Sbjct: 206 KNGSVLIWNVLIHGYCRMGDLVKATELFDSMPKKDTGSWNSLINGFM------------- 252

Query: 332 CIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNG 391
                                     ++ +M  A++LF +  EK++ SW  M+ G++QNG
Sbjct: 253 --------------------------KMGDMGRAKELFVKMPEKNVVSWTTMVNGFSQNG 286

Query: 392 LTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVST 451
             E+A+  F  M      PN  T+ S LSACA++GA+  G  +H  +    F+ N+ + T
Sbjct: 287 DPEKALETFFCMLEEGARPNDYTIVSALSACAKIGALDAGLRIHNYLSGNGFKLNLVIGT 346

Query: 452 ALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRP 511
           AL+DMYAKCGNI  A ++F     K  + W+ MI G+ +HGH  +ALQ F  M  +G +P
Sbjct: 347 ALVDMYAKCGNIEHAEKVFHETKEKGLLIWSVMIWGWAIHGHFRKALQYFEWMKFTGTKP 406

Query: 512 SGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEF 571
             V FL+VL ACSH+G V EG + F +M   +  +P  +HY  +VD+LGRAG+L++AL+F
Sbjct: 407 DSVVFLAVLNACSHSGQVNEGLKFFDNMRRGYLIEPSMKHYTLVVDMLGRAGRLDEALKF 466

Query: 572 IKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDY 631
           I+ + + P   VWGAL  AC  HK+  +A +AS+KL +L+P++ G +V LSN Y++   +
Sbjct: 467 IRAMPITPDFVVWGALFCACRTHKNVEMAELASKKLLQLEPKHPGSYVFLSNAYASVGRW 526

Query: 632 LQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREA 691
             A  VR  ++     K PG + IEV    H F +GD  H ++  IY+ L++++   RE 
Sbjct: 527 DDAERVRVSMRDHGAHKDPGWSFIEVDHKLHRFVAGDNTHNRAVEIYSKLDEISASAREK 586

Query: 692 GFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTAT 751
           G+  E    LH++EEEEKE  +  HSEKLA+AFG+++T PGT +RI+KNLRVC+DCH+  
Sbjct: 587 GYTKEIECVLHNIEEEEKEEALGYHSEKLALAFGIVSTRPGTTVRIVKNLRVCVDCHSFM 646

Query: 752 KFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           K+ SK++ R I++RD  RFHHF  GVCSCGDYW
Sbjct: 647 KYASKMSKREIILRDMKRFHHFNDGVCSCGDYW 679



 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 145/541 (26%), Positives = 243/541 (44%), Gaps = 53/541 (9%)

Query: 12  FLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPD 71
           F+ L+  + +  +L Q H Q+      +    VT+     S   +  YA ++F      +
Sbjct: 45  FIDLIHASNSTHKLRQIHGQLYRCNVFSSSRVVTQFISSCSSLNSVDYAISIFQRFELKN 104

Query: 72  LFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLH 131
            +LFN +IRG + N   +SSI F+  + K   ++PD  T+ FVL +A+A  +  +G  LH
Sbjct: 105 SYLFNALIRGLAENSRFESSISFFVLMLK-WKISPDRLTFPFVLKSAAALSNGGVGRALH 163

Query: 132 GHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEK----DTVLWNSMISGLMKN 187
              +  G   D FV  +LVD+Y K   + SA KVFD+ PE       ++WN +I G  + 
Sbjct: 164 CGILKFGLEFDSFVRVSLVDMYVKVEELGSALKVFDESPESVKNGSVLIWNVLIHGYCR- 222

Query: 188 CCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYV 247
                     GD+V+                      EL   M  +  G           
Sbjct: 223 ---------MGDLVK--------------------ATELFDSMPKKDTG----------S 243

Query: 248 LTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAE 307
              L++ + K G++ RA+ LF  +   +++S   M++G++ NG  E +L  F  +L    
Sbjct: 244 WNSLINGFMKMGDMGRAKELFVKMPEKNVVSWTTMVNGFSQNGDPEKALETFFCMLEEGA 303

Query: 308 RVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARK 367
           R N  TIV  +      G L     IH++   +G   N  + TAL  +Y++   +E A K
Sbjct: 304 RPNDYTIVSALSACAKIGALDAGLRIHNYLSGNGFKLNLVIGTALVDMYAKCGNIEHAEK 363

Query: 368 LFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGA 427
           +F E+ EK L  W+ MI G+  +G   +A+  F+ M+ +   P+ V   ++L+AC+  G 
Sbjct: 364 VFHETKEKGLLIWSVMIWGWAIHGHFRKALQYFEWMKFTGTKPDSVVFLAVLNACSHSGQ 423

Query: 428 ISLG-KWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSE-VTWNTMI 485
           ++ G K+   + +    E ++   T ++DM  + G + EA +    M    + V W  + 
Sbjct: 424 VNEGLKFFDNMRRGYLIEPSMKHYTLVVDMLGRAGRLDEALKFIRAMPITPDFVVWGALF 483

Query: 486 SGYGLHGHGLEALQLFSEMLHS--GIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDH 543
                H + +E  +L S+ L       P    FLS  YA    G   + + +  SM  DH
Sbjct: 484 CACRTHKN-VEMAELASKKLLQLEPKHPGSYVFLSNAYAS--VGRWDDAERVRVSM-RDH 539

Query: 544 G 544
           G
Sbjct: 540 G 540



 Score = 95.9 bits (237), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 83/333 (24%), Positives = 136/333 (40%), Gaps = 68/333 (20%)

Query: 328 HLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGY 387
           H    IH    +  + S+S V+T   +  S LN ++ A  +F     K+   +NA+I G 
Sbjct: 56  HKLRQIHGQLYRCNVFSSSRVVTQFISSCSSLNSVDYAISIFQRFELKNSYLFNALIRGL 115

Query: 388 TQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNI 447
            +N   E +IS F  M   K++P+ +T   +L + A L    +G+ +H  +     E + 
Sbjct: 116 AENSRFESSISFFVLMLKWKISPDRLTFPFVLKSAAALSNGGVGRALHCGILKFGLEFDS 175

Query: 448 YVSTALIDMYAKC-----------------------------------GNIVEARELFD- 471
           +V  +L+DMY K                                    G++V+A ELFD 
Sbjct: 176 FVRVSLVDMYVKVEELGSALKVFDESPESVKNGSVLIWNVLIHGYCRMGDLVKATELFDS 235

Query: 472 ------------------------------LMSHKSEVTWNTMISGYGLHGHGLEALQLF 501
                                          M  K+ V+W TM++G+  +G   +AL+ F
Sbjct: 236 MPKKDTGSWNSLINGFMKMGDMGRAKELFVKMPEKNVVSWTTMVNGFSQNGDPEKALETF 295

Query: 502 SEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGR 561
             ML  G RP+  T +S L AC+  G +  G  I  + +  +GFK        +VD+  +
Sbjct: 296 FCMLEEGARPNDYTIVSALSACAKIGALDAGLRI-HNYLSGNGFKLNLVIGTALVDMYAK 354

Query: 562 AGQLEKALEFIKGLAVEPGPAVWGALLGACMIH 594
            G +E A E +     E G  +W  ++    IH
Sbjct: 355 CGNIEHA-EKVFHETKEKGLLIWSVMIWGWAIH 386


>gi|302820798|ref|XP_002992065.1| hypothetical protein SELMODRAFT_134581 [Selaginella moellendorffii]
 gi|300140187|gb|EFJ06914.1| hypothetical protein SELMODRAFT_134581 [Selaginella moellendorffii]
          Length = 771

 Score =  410 bits (1053), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 263/752 (34%), Positives = 413/752 (54%), Gaps = 36/752 (4%)

Query: 46  KLAHRLSDFKATC----YARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKN 101
           +L + L D    C     ARA+F  +  P+ + ++ II+ + ++     +   +  +   
Sbjct: 43  RLTNLLIDLFGKCGDPDAARAVFNRVRLPNEYSWSCIIQAYVSSSRIHDARALFDSM--- 99

Query: 102 TALTP--DNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWV 159
               P  D FT++ ++ AA A  +R        H ++SG   D+   A LV  Y +   +
Sbjct: 100 ----PGFDAFTWNIMI-AAYARINRLDDARELFHGMISG--RDVVSWAILVAGYARHDRL 152

Query: 160 KSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPA 219
           + A  +F +MP  DTV   S++ G   N    ++  +F D +   G   D+T+  A++ A
Sbjct: 153 EEASALFRRMPLWDTVTCTSVLQGYAHNGHLAEAQELF-DRIGGAGD-RDATACNAMIAA 210

Query: 220 VAEVQELRL--GMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLI 277
             +   + L  G+  Q + L+      + +LT     Y++ G ++ A+  F  + + D I
Sbjct: 211 YGKNARVDLAEGLFAQ-IKLRNAASWSLLLLT-----YAQNGHLDLAKKSFDRMPQRDSI 264

Query: 278 SCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFC 337
           +  AM +  +  G+    LR  R++L     V+      L+  +   G L     + S  
Sbjct: 265 AFTAMTAVLSDQGE----LRGAREMLRYLSAVDVIAWNALLEGYSRTGDLDEVRRLFS-A 319

Query: 338 LKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAI 397
           ++   V+ + V   L  +Y +   ++ AR++ D    ++  SW AMIA Y QNG   EAI
Sbjct: 320 MEHRTVATTVVAGTLVNLYGKCGRVDDARRVLDAMPVRTSVSWTAMIAAYAQNGNAAEAI 379

Query: 398 SLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRN-FESNIYVSTALIDM 456
           +LFQ M      P+ +T+ S++ +CA LG +SLGK +H  ++S   F  ++ +  A+I M
Sbjct: 380 NLFQCMDLEGAEPSDITLISVVDSCAVLGTLSLGKRIHARIRSSPLFSQSLMLLNAVITM 439

Query: 457 YAKCGNIVEARELFD--LMSHKSEVTWNTMISGYGLHGHGLEALQLFSEM-LHSGIRPSG 513
           Y KCGN+  ARE+F+   +  +S VTW  MI  Y  +G G EA++LF EM +  G  P+ 
Sbjct: 440 YGKCGNLELAREVFESVPLRTRSVVTWTAMIRAYAQNGVGEEAIELFQEMVIDGGTEPNR 499

Query: 514 VTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFI- 572
           VTFLSVL ACSH G + +  E F SM  D G  P  +HY C+VD+LGRAG+L +A + + 
Sbjct: 500 VTFLSVLSACSHLGQLEQAWEHFCSMGPDFGVPPAGDHYCCLVDLLGRAGRLGEAEKLLL 559

Query: 573 KGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYL 632
           +    E     W A L AC ++ D   ++ A++++ EL+PENV   VLLSN+Y+A+    
Sbjct: 560 RHKDFEADVVCWIAFLSACQMNGDLERSQRAAKRVSELEPENVAGRVLLSNVYAAKGRRA 619

Query: 633 QAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAG 692
             A +R  +K   + K  G + IE+    H F   D  HP+   IY+ LE+L+ +++EAG
Sbjct: 620 DVARIRNEMKSSGVKKFAGRSWIEINNRVHEFMVSDVSHPRKLEIYSELERLHREIKEAG 679

Query: 693 FQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATK 752
           +  +T   L DV+EE+K  ++  HSE+LA+A G+I+T PGT +R++KNLRVC DCH ATK
Sbjct: 680 YVPDTKMVLRDVDEEKKAQLLGYHSERLAMALGIISTPPGTTLRVVKNLRVCSDCHAATK 739

Query: 753 FISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           FIS++ GR I+VRD +RFHHFK GVCSCGDYW
Sbjct: 740 FISQIVGRQIIVRDTSRFHHFKDGVCSCGDYW 771



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 104/464 (22%), Positives = 210/464 (45%), Gaps = 21/464 (4%)

Query: 129 LLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNC 188
           +LH     S +G +  +   L+DL+ K     +AR VF+++   +   W+ +I   + + 
Sbjct: 28  ILHDEIARSPHGDNRRLTNLLIDLFGKCGDPDAARAVFNRVRLPNEYSWSCIIQAYVSSS 87

Query: 189 CFQDSIWVFGDMVR-NGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYV 247
              D+  +F  M   +  TW    +  A +  + + +EL  GM        +   D V  
Sbjct: 88  RIHDARALFDSMPGFDAFTWNIMIAAYARINRLDDARELFHGM--------ISGRD-VVS 138

Query: 248 LTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAE 307
              LV+ Y++   +E A  LFR +   D ++C +++ GY  NG    +  LF ++  + +
Sbjct: 139 WAILVAGYARHDRLEEASALFRRMPLWDTVTCTSVLQGYAHNGHLAEAQELFDRIGGAGD 198

Query: 308 RVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARK 367
           R +++    +I  +     + L   + +       + N++  + L   Y++   ++ A+K
Sbjct: 199 R-DATACNAMIAAYGKNARVDLAEGLFAQIK----LRNAASWSLLLLTYAQNGHLDLAKK 253

Query: 368 LFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGA 427
            FD   ++   ++ AM A  +  G    A  + + + A  V    +  +++L   ++ G 
Sbjct: 254 SFDRMPQRDSIAFTAMTAVLSDQGELRGAREMLRYLSAVDV----IAWNALLEGYSRTGD 309

Query: 428 ISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISG 487
           +   + +   ++ R   + +   T L+++Y KCG + +AR + D M  ++ V+W  MI+ 
Sbjct: 310 LDEVRRLFSAMEHRTVATTVVAGT-LVNLYGKCGRVDDARRVLDAMPVRTSVSWTAMIAA 368

Query: 488 YGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKP 547
           Y  +G+  EA+ LF  M   G  PS +T +SV+ +C+  G +  G  I   +     F  
Sbjct: 369 YAQNGNAAEAINLFQCMDLEGAEPSDITLISVVDSCAVLGTLSLGKRIHARIRSSPLFSQ 428

Query: 548 LAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAV-WGALLGA 590
                  ++ + G+ G LE A E  + + +     V W A++ A
Sbjct: 429 SLMLLNAVITMYGKCGNLELAREVFESVPLRTRSVVTWTAMIRA 472



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 46/188 (24%), Positives = 86/188 (45%), Gaps = 11/188 (5%)

Query: 327 LHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAG 386
           LH    +H    +S    N  +   L  ++ +  + +AAR +F+     +  SW+ +I  
Sbjct: 23  LHEAKILHDEIARSPHGDNRRLTNLLIDLFGKCGDPDAARAVFNRVRLPNEYSWSCIIQA 82

Query: 387 YTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWV-HELVKSRNFES 445
           Y  +    +A +LF  M       +  T + +++A A++  +   + + H ++  R+   
Sbjct: 83  YVSSSRIHDARALFDSMPGF----DAFTWNIMIAAYARINRLDDARELFHGMISGRDV-- 136

Query: 446 NIYVSTA-LIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEM 504
              VS A L+  YA+   + EA  LF  M     VT  +++ GY  +GH  EA +LF  +
Sbjct: 137 ---VSWAILVAGYARHDRLEEASALFRRMPLWDTVTCTSVLQGYAHNGHLAEAQELFDRI 193

Query: 505 LHSGIRPS 512
             +G R +
Sbjct: 194 GGAGDRDA 201



 Score = 43.1 bits (100), Expect = 0.66,   Method: Compositional matrix adjust.
 Identities = 38/152 (25%), Positives = 65/152 (42%), Gaps = 12/152 (7%)

Query: 419 LSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSE 478
           + ACA    +   K +H+ +       N  ++  LID++ KCG+   AR +F+ +   +E
Sbjct: 14  IRACAIGRKLHEAKILHDEIARSPHGDNRRLTNLLIDLFGKCGDPDAARAVFNRVRLPNE 73

Query: 479 VTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGD--EIF 536
            +W+ +I  Y       +A  LF  M      P    F   +   ++A + R  D  E+F
Sbjct: 74  YSWSCIIQAYVSSSRIHDARALFDSM------PGFDAFTWNIMIAAYARINRLDDARELF 127

Query: 537 QSMIHDHGFKPLAEHYACMVDILGRAGQLEKA 568
             MI           +A +V    R  +LE+A
Sbjct: 128 HGMISGRDVVS----WAILVAGYARHDRLEEA 155


>gi|225428334|ref|XP_002279974.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
           mitochondrial [Vitis vinifera]
          Length = 623

 Score =  410 bits (1053), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 214/586 (36%), Positives = 339/586 (57%), Gaps = 6/586 (1%)

Query: 199 DMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKC 258
           D +   G + D+ + + ++   +    ++ G  +       G+   ++V+  L++ Y K 
Sbjct: 44  DAMERHGVFADAITYSELIKCCSARGAVQEGKRVHEHIFCKGYEPKMFVVNTLLNMYVKF 103

Query: 259 GEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLI 318
             +E AE LF ++   +++S   MIS Y+ N   + +L+    +     R N  T   ++
Sbjct: 104 NLLEEAEDLFDEMPERNVVSWTTMISAYS-NKLNDKALKCLILMFREGVRPNMFTYSSVL 162

Query: 319 PVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLA 378
                  +L     +H   +K+G+ S+  V +AL  VYS+ ++++ A  +FDE   + L 
Sbjct: 163 RACDGLPNLRQ---LHCGIIKTGLESDVFVRSALIDVYSKWSDLDNALGVFDEMPTRDLV 219

Query: 379 SWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELV 438
            WN++I G+ QN    EA++LF+ M+ +    +  T++S+L AC  L  + LG+ VH  V
Sbjct: 220 VWNSIIGGFAQNSDGNEALNLFKRMKRAGFLADQATLTSVLRACTGLALLELGRQVH--V 277

Query: 439 KSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEAL 498
               F+ ++ ++ ALIDMY KCG++ +A   F  M  K  ++W+TM++G   +G+  +AL
Sbjct: 278 HVLKFDQDLILNNALIDMYCKCGSLEDANSAFSRMVEKDVISWSTMVAGLAQNGYSRQAL 337

Query: 499 QLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDI 558
           +LF  M  SG RP+ +T L VL+ACSHAGLV +G   F+SM    G  P  EHY C++D+
Sbjct: 338 ELFESMKESGSRPNYITVLGVLFACSHAGLVEKGWYYFRSMKKLFGVDPGREHYGCLIDL 397

Query: 559 LGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYH 618
           LGRAG+L++A++ I  +  EP    W  LLGAC +H++ +LA  A++K+ EL+PE+ G +
Sbjct: 398 LGRAGRLDEAVKLIHEMECEPDSVTWRTLLGACRVHRNVDLAIYAAKKIIELEPEDAGTY 457

Query: 619 VLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIY 678
           +LLSNIY+  + +   A VR+ +  R + K PGC+ IEV    HVF  GD  HP+   I 
Sbjct: 458 ILLSNIYANTQRWEDVAEVRKTMTNRGIRKTPGCSWIEVDKQIHVFILGDTSHPKIEEIV 517

Query: 679 AMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRII 738
             L  L  ++   G+  +T   L D+E E+KE  ++ HSEKLAI FGL+       +RI 
Sbjct: 518 QRLNDLIERVMGVGYVPDTNFVLQDLEGEQKEDSLRYHSEKLAIMFGLMNLSREKTVRIR 577

Query: 739 KNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           KNLR+C DCH   K +S++  R IV+RD  R+HHF+ GVCSCGDYW
Sbjct: 578 KNLRICGDCHVFAKVVSRMEHRSIVIRDPIRYHHFQDGVCSCGDYW 623



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 108/392 (27%), Positives = 190/392 (48%), Gaps = 19/392 (4%)

Query: 107 DNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVF 166
           D  TYS ++   SA      G  +H H    GY   +FV   L+++Y KF+ ++ A  +F
Sbjct: 54  DAITYSELIKCCSARGAVQEGKRVHEHIFCKGYEPKMFVVNTLLNMYVKFNLLEEAEDLF 113

Query: 167 DKMPEKDTVLWNSMISGL---MKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEV 223
           D+MPE++ V W +MIS     + +   +  I +F + VR      +  + ++VL A   +
Sbjct: 114 DEMPERNVVSWTTMISAYSNKLNDKALKCLILMFREGVRP-----NMFTYSSVLRACDGL 168

Query: 224 QELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMI 283
             LR   ++ C  +K G    V+V + L+  YSK  +++ A  +F ++   DL+  N++I
Sbjct: 169 PNLR---QLHCGIIKTGLESDVFVRSALIDVYSKWSDLDNALGVFDEMPTRDLVVWNSII 225

Query: 284 SGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLK--SG 341
            G+  N     +L LF+++  +    + +T+  ++        L L   +H   LK    
Sbjct: 226 GGFAQNSDGNEALNLFKRMKRAGFLADQATLTSVLRACTGLALLELGRQVHVHVLKFDQD 285

Query: 342 IVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQ 401
           ++ N+    AL  +Y +   +E A   F    EK + SW+ M+AG  QNG + +A+ LF+
Sbjct: 286 LILNN----ALIDMYCKCGSLEDANSAFSRMVEKDVISWSTMVAGLAQNGYSRQALELFE 341

Query: 402 EMQASKVAPNPVTVSSILSACAQLGAISLG-KWVHELVKSRNFESNIYVSTALIDMYAKC 460
            M+ S   PN +TV  +L AC+  G +  G  +   + K    +        LID+  + 
Sbjct: 342 SMKESGSRPNYITVLGVLFACSHAGLVEKGWYYFRSMKKLFGVDPGREHYGCLIDLLGRA 401

Query: 461 GNIVEARELFDLMSHKSE-VTWNTMISGYGLH 491
           G + EA +L   M  + + VTW T++    +H
Sbjct: 402 GRLDEAVKLIHEMECEPDSVTWRTLLGACRVH 433



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 123/441 (27%), Positives = 201/441 (45%), Gaps = 60/441 (13%)

Query: 17  KGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFN 76
           +GA  + +  + H  I   G++  +  V  L +    F     A  LF  +P+ ++  + 
Sbjct: 68  RGAVQEGK--RVHEHIFCKGYEPKMFVVNTLLNMYVKFNLLEEAEDLFDEMPERNVVSWT 125

Query: 77  VIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVL-LHGHAI 135
            +I  +SN    K+  C     R+   + P+ FTYS VL A    CD    +  LH   I
Sbjct: 126 TMISAYSNKLNDKALKCLILMFRE--GVRPNMFTYSSVLRA----CDGLPNLRQLHCGII 179

Query: 136 VSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIW 195
            +G  SD+FV +AL+D+Y K+S + +A  VFD+MP +D V+WNS+I G  +N    +++ 
Sbjct: 180 KTGLESDVFVRSALIDVYSKWSDLDNALGVFDEMPTRDLVVWNSIIGGFAQNSDGNEALN 239

Query: 196 VFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFY 255
           +F  M R  G   D  ++ +VL A   +  L LG ++    LK  F   + +   L+  Y
Sbjct: 240 LFKRMKR-AGFLADQATLTSVLRACTGLALLELGRQVHVHVLK--FDQDLILNNALIDMY 296

Query: 256 SKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIV 315
            KCG +E A   F  +V  D+IS + M++G   NG +  +L LF  +  S  R N  T++
Sbjct: 297 CKCGSLEDANSAFSRMVEKDVISWSTMVAGLAQNGYSRQALELFESMKESGSRPNYITVL 356

Query: 316 GLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEK 375
           G+           L  C H+  ++ G              Y R     + +KLF    + 
Sbjct: 357 GV-----------LFACSHAGLVEKG------------WYYFR-----SMKKLF--GVDP 386

Query: 376 SLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVH 435
               +  +I    + G  +EA+ L  EM+     P+ VT  ++L AC           VH
Sbjct: 387 GREHYGCLIDLLGRAGRLDEAVKLIHEMECE---PDSVTWRTLLGACR----------VH 433

Query: 436 ELVKSRNFESNIYVSTALIDM 456
                RN +  IY +  +I++
Sbjct: 434 -----RNVDLAIYAAKKIIEL 449



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 60/217 (27%), Positives = 101/217 (46%), Gaps = 30/217 (13%)

Query: 396 AISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALID 455
           A+     M+   V  + +T S ++  C+  GA+  GK VHE +  + +E  ++V   L++
Sbjct: 39  AMRAMDAMERHGVFADAITYSELIKCCSARGAVQEGKRVHEHIFCKGYEPKMFVVNTLLN 98

Query: 456 MYAKCGNIVEARELFDLMSHKSEVTWNTMISGYG--LHGHGLEALQLFSEMLHSGIRPSG 513
           MY K   + EA +LFD M  ++ V+W TMIS Y   L+   L+ L L   M   G+RP+ 
Sbjct: 99  MYVKFNLLEEAEDLFDEMPERNVVSWTTMISAYSNKLNDKALKCLIL---MFREGVRPNM 155

Query: 514 VTFLSVLYACS--------HAGLVREG--DEIFQSMIHDHGFKPLAEHYACMVDILGRAG 563
            T+ SVL AC         H G+++ G   ++F                + ++D+  +  
Sbjct: 156 FTYSSVLRACDGLPNLRQLHCGIIKTGLESDVFVR--------------SALIDVYSKWS 201

Query: 564 QLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLA 600
            L+ AL     +       VW +++G    + D N A
Sbjct: 202 DLDNALGVFDEMPTR-DLVVWNSIIGGFAQNSDGNEA 237


>gi|449441574|ref|XP_004138557.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Cucumis sativus]
          Length = 766

 Score =  410 bits (1053), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 233/686 (33%), Positives = 370/686 (53%), Gaps = 27/686 (3%)

Query: 15  LLKGAKTQSQLTQTHAQIIIHGFQNDLSTV--TKLAH---RLSDFKATCYARALFFSIPK 69
            LK AKT       H  ++   F N  S V    +AH   + SD  A C    LF  + +
Sbjct: 83  FLKQAKT------VHGFLLKSKFSNHHSLVLLNHVAHAYSKCSDIDAAC---RLFDQMSQ 133

Query: 70  PDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVL 129
            + F + V+I G + N +      F+  + ++  + PD F YS +L          +G +
Sbjct: 134 RNTFSWTVLIAGLAENGLFLDGFEFFCEM-QSQGIFPDQFAYSGILQICIGLDSIELGNM 192

Query: 130 LHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCC 189
           +H   ++ G+ S  FV  AL+++Y K   ++ + KVF+ M E + V WN+MI+G   N  
Sbjct: 193 VHAQIVIRGFTSHTFVSTALLNMYAKLQEIEDSYKVFNTMTEVNVVSWNAMITGFTSNDL 252

Query: 190 FQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLT 249
           + D+  +F  M+  G T  D+ +   V  A+  ++++    E+    L+LG   +  V T
Sbjct: 253 YLDAFDLFLRMMGEGVT-PDAQTFIGVAKAIGMLRDVNKAKEVSGYALELGVDSNTLVGT 311

Query: 250 GLVSFYSKCGEVERAELLFRDIVRPDLISC------NAMISGYTCNGKTESSLRLFRQLL 303
            L+   SKCG ++ A    R I     I+C      NAMISGY  +G  E +L LF ++ 
Sbjct: 312 ALIDMNSKCGSLQEA----RSIFNSHFITCRFNAPWNAMISGYLRSGFNEKALELFAKMC 367

Query: 304 ASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGI-VSNSSVLTALSTVYSRLNEM 362
            +   ++  T   +         L L   +H+  +KSG+ V+  S+  A++  Y++   +
Sbjct: 368 QNDIYLDHYTYCSVFNAIAALKCLSLGKKVHARAIKSGLEVNYVSISNAVANAYAKCGSL 427

Query: 363 EAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSAC 422
           E  RK+F+   ++ L SW +++  Y+Q    ++AI +F  M+A  +APN  T SS+L +C
Sbjct: 428 EDVRKVFNRMEDRDLISWTSLVTAYSQCSEWDKAIEIFSNMRAEGIAPNQFTFSSVLVSC 487

Query: 423 AQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWN 482
           A L  +  G+ VH ++     + +  + +AL+DMYAKCG + +A+++F+ +S+   V+W 
Sbjct: 488 ANLCLLEYGQQVHGIICKVGLDMDKCIESALVDMYAKCGCLGDAKKVFNRISNADTVSWT 547

Query: 483 TMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHD 542
            +I+G+  HG   +ALQLF  M+  G+ P+ VTFL VL+ACSH GLV EG + F+ M   
Sbjct: 548 AIIAGHAQHGIVDDALQLFRRMVQLGVEPNAVTFLCVLFACSHGGLVEEGLQYFKLMKKT 607

Query: 543 HGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARV 602
           +G  P  EHYAC+VD+L R G L  A+EFI  + VEP   VW  LLGAC +H +  L  +
Sbjct: 608 YGLVPEMEHYACIVDLLSRVGHLNDAMEFISRMPVEPNEMVWQTLLGACRVHGNVELGEL 667

Query: 603 ASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPH 662
           A++K+     EN   +VLLSN Y     Y    ++R ++K++ + K PGC+ I V GT H
Sbjct: 668 AAQKILSFKAENSATYVLLSNTYIESGSYKDGLSLRHLMKEQGVKKEPGCSWISVNGTLH 727

Query: 663 VFTSGDQLHPQSTAIYAMLEKLNGKM 688
            F +GDQ HP+   IYA LE+L  K+
Sbjct: 728 KFYAGDQQHPEKDKIYAKLEELKLKL 753


>gi|15239745|ref|NP_199702.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75170778|sp|Q9FI80.1|PP425_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g48910
 gi|10177180|dbj|BAB10314.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|15810559|gb|AAL07167.1| putative selenium-binding protein [Arabidopsis thaliana]
 gi|332008359|gb|AED95742.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 646

 Score =  409 bits (1052), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 183/429 (42%), Positives = 287/429 (66%)

Query: 356 YSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTV 415
           Y RL + +AAR LFD+  ++S+ SWN MI+GY+ NG  ++A+ +F+EM+   + PN VT+
Sbjct: 218 YMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTL 277

Query: 416 SSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSH 475
            S+L A ++LG++ LG+W+H   +      +  + +ALIDMY+KCG I +A  +F+ +  
Sbjct: 278 VSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPR 337

Query: 476 KSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEI 535
           ++ +TW+ MI+G+ +HG   +A+  F +M  +G+RPS V ++++L ACSH GLV EG   
Sbjct: 338 ENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRY 397

Query: 536 FQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHK 595
           F  M+   G +P  EHY CMVD+LGR+G L++A EFI  + ++P   +W ALLGAC +  
Sbjct: 398 FSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGACRMQG 457

Query: 596 DTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLI 655
           +  + +  +  L ++ P + G +V LSN+Y+++ ++ + + +R  +K++ + K PGC+LI
Sbjct: 458 NVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKDIRKDPGCSLI 517

Query: 656 EVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKV 715
           ++ G  H F   D  HP++  I +ML +++ K+R AG++  T   L ++EEE+KE ++  
Sbjct: 518 DIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLAGYRPITTQVLLNLEEEDKENVLHY 577

Query: 716 HSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKG 775
           HSEK+A AFGLI+T PG  IRI+KNLR+C DCH++ K ISKV  R I VRD  RFHHF+ 
Sbjct: 578 HSEKIATAFGLISTSPGKPIRIVKNLRICEDCHSSIKLISKVYKRKITVRDRKRFHHFQD 637

Query: 776 GVCSCGDYW 784
           G CSC DYW
Sbjct: 638 GSCSCMDYW 646



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 130/519 (25%), Positives = 217/519 (41%), Gaps = 98/519 (18%)

Query: 16  LKGAKTQSQLTQTHAQIIIHGFQND---------LSTVTKLAHRLSDFKATCYARALFFS 66
           +   +T   L+Q HA  I  G   D             + L HR  D     YA  +F  
Sbjct: 30  INNCRTIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLD-----YAHKIFNQ 84

Query: 67  IPKPDLFLFNVIIRGFSNNEMPKS--SICFYTHLRKNTALTPDNFTYSFVLSAASACCDR 124
           +P+ + F +N IIRGFS ++  K+  +I  +  +  +  + P+ FT+  VL A +     
Sbjct: 85  MPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKI 144

Query: 125 SIGVLLHGHAIVSGYGSDLFVGAALV---------------------------------- 150
             G  +HG A+  G+G D FV + LV                                  
Sbjct: 145 QEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKR 204

Query: 151 -----------DLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGD 199
                      D Y +    K+AR +FDKM ++  V WN+MISG   N  F+D++ VF +
Sbjct: 205 DGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFRE 264

Query: 200 MVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCG 259
           M + G    +  ++ +VLPA++ +  L LG  +       G      + + L+  YSKCG
Sbjct: 265 M-KKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCG 323

Query: 260 EVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIP 319
            +E+A  +F  + R ++I+ +AMI+G+  +G+   ++  F ++  +  R +    + L  
Sbjct: 324 IIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINL-- 381

Query: 320 VFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLAS 379
                    LT C H   ++ G    S +++                    +  E  +  
Sbjct: 382 ---------LTACSHGGLVEEGRRYFSQMVSV-------------------DGLEPRIEH 413

Query: 380 WNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHE-LV 438
           +  M+    ++GL +EA      M    + P+ V   ++L AC   G + +GK V   L+
Sbjct: 414 YGCMVDLLGRSGLLDEAEEFILNM---PIKPDDVIWKALLGACRMQGNVEMGKRVANILM 470

Query: 439 KSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKS 477
                +S  YV  AL +MYA  GN  E  E+   M  K 
Sbjct: 471 DMVPHDSGAYV--ALSNMYASQGNWSEVSEMRLRMKEKD 507



 Score =  136 bits (342), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 104/421 (24%), Positives = 196/421 (46%), Gaps = 61/421 (14%)

Query: 130 LHGHAIVSGYGSDLFVGAALV------DLYFKFSWVKSARKVFDKMPEKDTVLWNSMISG 183
           +H   I SG   D    A ++      DL+ +   +  A K+F++MP+++   WN++I G
Sbjct: 42  IHAVFIKSGQMRDTLAAAEILRFCATSDLHHRD--LDYAHKIFNQMPQRNCFSWNTIIRG 99

Query: 184 LMKNCCFQD----SIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKL 239
             ++   +D    +I +F +M+ +     +  +  +VL A A+  +++ G +I  L LK 
Sbjct: 100 FSESD--EDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHGLALKY 157

Query: 240 GFHDHVYVLTGLVSFYSKCGEVERAELLF-RDIVRPDLI--------------------- 277
           GF    +V++ LV  Y  CG ++ A +LF ++I+  D++                     
Sbjct: 158 GFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMIDG 217

Query: 278 -----------------------SCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTI 314
                                  S N MISGY+ NG  + ++ +FR++     R N  T+
Sbjct: 218 YMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTL 277

Query: 315 VGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSE 374
           V ++P     G L L   +H +   SGI  +  + +AL  +YS+   +E A  +F+    
Sbjct: 278 VSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPR 337

Query: 375 KSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLG-KW 433
           +++ +W+AMI G+  +G   +AI  F +M+ + V P+ V   ++L+AC+  G +  G ++
Sbjct: 338 ENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRY 397

Query: 434 VHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHK-SEVTWNTMISGYGLHG 492
             ++V     E  I     ++D+  + G + EA E    M  K  +V W  ++    + G
Sbjct: 398 FSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGACRMQG 457

Query: 493 H 493
           +
Sbjct: 458 N 458



 Score =  129 bits (324), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 101/344 (29%), Positives = 160/344 (46%), Gaps = 56/344 (16%)

Query: 333 IHSFCLKSGIVSNS----SVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYT 388
           IH+  +KSG + ++     +L   +T      +++ A K+F++  +++  SWN +I G++
Sbjct: 42  IHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRNCFSWNTIIRGFS 101

Query: 389 QNGLTEE--AISLFQEMQASK-VAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFES 445
           ++   +   AI+LF EM + + V PN  T  S+L ACA+ G I  GK +H L     F  
Sbjct: 102 ESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHGLALKYGFGG 161

Query: 446 NIYVSTALIDMYAKCG-----------NIVE----------------------------- 465
           + +V + L+ MY  CG           NI+E                             
Sbjct: 162 DEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGYMRL 221

Query: 466 -----ARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVL 520
                AR LFD M  +S V+WNTMISGY L+G   +A+++F EM    IRP+ VT +SVL
Sbjct: 222 GDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVL 281

Query: 521 YACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPG 580
            A S  G +  G E       D G +      + ++D+  + G +EKA+   + L  E  
Sbjct: 282 PAISRLGSLELG-EWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRE-N 339

Query: 581 PAVWGALLGACMIHKDTNLARVASEKLFE--LDPENVGYHVLLS 622
              W A++    IH     A     K+ +  + P +V Y  LL+
Sbjct: 340 VITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLT 383


>gi|356534289|ref|XP_003535689.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g43790-like [Glycine max]
          Length = 591

 Score =  409 bits (1052), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 226/585 (38%), Positives = 330/585 (56%), Gaps = 17/585 (2%)

Query: 216 VLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPD 275
           +L  + +   L    ++    L  G     Y L+ L++  SK      A  +F  I  P 
Sbjct: 8   ILQKLQKCHNLNTLKQVHAQMLTTGLSFQTYYLSHLLNTSSKFAST-YAFTIFNHIPNPT 66

Query: 276 LISCNAMISGYTCNG-KTESSLRLFRQLLASAE-RVNSSTIVGLIPVFYPFGHLHLTNCI 333
           L   N +IS  T +  +   +  L+  +L     + NS T   L         L     +
Sbjct: 67  LFLYNTLISSLTHHSDQIHLAFSLYNHILTHKTLQPNSFTFPSLFKACASHPWLQHGPPL 126

Query: 334 HSFCLKS-GIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNG- 391
           H+  LK      +  V  +L   Y++  ++  +R LFD+ SE  LA+WN M+A Y Q+  
Sbjct: 127 HAHVLKFLQPPYDPFVQNSLLNFYAKYGKLCVSRYLFDQISEPDLATWNTMLAAYAQSAS 186

Query: 392 ------------LTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVK 439
                       ++ EA+ LF +MQ S++ PN VT+ +++SAC+ LGA+S G W H  V 
Sbjct: 187 HVSYSTSFEDADMSLEALHLFCDMQLSQIKPNEVTLVALISACSNLGALSQGAWAHGYVL 246

Query: 440 SRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQ 499
             N + N +V TAL+DMY+KCG +  A +LFD +S +    +N MI G+ +HGHG +AL+
Sbjct: 247 RNNLKLNRFVGTALVDMYSKCGCLNLACQLFDELSDRDTFCYNAMIGGFAVHGHGNQALE 306

Query: 500 LFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDIL 559
           L+  M    + P G T +  ++ACSH GLV EG EIF+SM   HG +P  EHY C++D+L
Sbjct: 307 LYRNMKLEDLVPDGATIVVTMFACSHGGLVEEGLEIFESMKGVHGMEPKLEHYGCLIDLL 366

Query: 560 GRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHV 619
           GRAG+L++A E ++ + ++P   +W +LLGA  +H +  +   A + L EL+PE  G +V
Sbjct: 367 GRAGRLKEAEERLQDMPMKPNAILWRSLLGAAKLHGNLEMGEAALKHLIELEPETSGNYV 426

Query: 620 LLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYA 679
           LLSN+Y++   +     VR ++K   + K PG +L+E+ G  H F +GD+ HP S  IY+
Sbjct: 427 LLSNMYASIGRWNDVKRVRMLMKDHGVDKLPGFSLVEINGAMHEFLTGDKAHPFSKEIYS 486

Query: 680 MLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIK 739
            + ++N ++ E G +  T   L DVEEE+KE  +  HSE+LAIAF LIA+     IRIIK
Sbjct: 487 KIGEINRRLLEYGHKPRTSEVLFDVEEEDKEDFLSYHSERLAIAFALIASSSSMPIRIIK 546

Query: 740 NLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           NLRVC DCH  TK IS    R I+VRD NRFHHFK G CSC DYW
Sbjct: 547 NLRVCGDCHAITKLISAAYQRDIIVRDRNRFHHFKDGSCSCLDYW 591



 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 114/477 (23%), Positives = 205/477 (42%), Gaps = 53/477 (11%)

Query: 13  LSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDL 72
           L  L+     + L Q HAQ++  G       ++ L +  S F +T YA  +F  IP P L
Sbjct: 9   LQKLQKCHNLNTLKQVHAQMLTTGLSFQTYYLSHLLNTSSKFAST-YAFTIFNHIPNPTL 67

Query: 73  FLFNVIIRGFSNN-EMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLH 131
           FL+N +I   +++ +    +   Y H+  +  L P++FT+  +  A ++      G  LH
Sbjct: 68  FLYNTLISSLTHHSDQIHLAFSLYNHILTHKTLQPNSFTFPSLFKACASHPWLQHGPPLH 127

Query: 132 GHAI-VSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNC-- 188
            H +       D FV  +L++ Y K+  +  +R +FD++ E D   WN+M++   ++   
Sbjct: 128 AHVLKFLQPPYDPFVQNSLLNFYAKYGKLCVSRYLFDQISEPDLATWNTMLAAYAQSASH 187

Query: 189 -----CFQD------SIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGL 237
                 F+D      ++ +F DM +      +  ++ A++ A + +  L  G       L
Sbjct: 188 VSYSTSFEDADMSLEALHLFCDM-QLSQIKPNEVTLVALISACSNLGALSQGAWAHGYVL 246

Query: 238 KLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLR 297
           +     + +V T LV  YSKCG +  A  LF ++   D    NAMI G+  +G    +L 
Sbjct: 247 RNNLKLNRFVGTALVDMYSKCGCLNLACQLFDELSDRDTFCYNAMIGGFAVHGHGNQALE 306

Query: 298 LFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYS 357
           L+R +       + +TIV  + +F          C H   ++ G+     +  ++  V+ 
Sbjct: 307 LYRNMKLEDLVPDGATIV--VTMF---------ACSHGGLVEEGL----EIFESMKGVHG 351

Query: 358 RLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSS 417
                           E  L  +  +I    + G  +EA    Q+M    + PN +   S
Sbjct: 352 M---------------EPKLEHYGCLIDLLGRAGRLKEAEERLQDM---PMKPNAILWRS 393

Query: 418 ILSACAQLGAISLGK-WVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLM 473
           +L A    G + +G+  +  L++     S  YV   L +MYA  G   + + +  LM
Sbjct: 394 LLGAAKLHGNLEMGEAALKHLIELEPETSGNYV--LLSNMYASIGRWNDVKRVRMLM 448


>gi|356524120|ref|XP_003530680.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g40405-like [Glycine max]
          Length = 616

 Score =  409 bits (1052), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 216/552 (39%), Positives = 310/552 (56%), Gaps = 48/552 (8%)

Query: 274 PDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHL------ 327
           P L + N+MI  Y+ +     S   +  +L S           L P  Y F  L      
Sbjct: 72  PTLFTLNSMIRAYSKSSTPSKSFHFYANILHSNNN-------NLSPDNYTFTFLVRTCAQ 124

Query: 328 ---HLTN-CIHSFCLKSGIVSNSSVLTALSTVYSRLN----------------------- 360
              H+T  C+H   +K G   +  V T L  +Y+ L                        
Sbjct: 125 LQAHVTGLCVHGAVIKHGFELDPHVQTGLVFMYAELGCLSSCHNVFDGAVEPDLVTQTAM 184

Query: 361 --------EMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNP 412
                   +++ ARK+FDE  E+   +WNAMIAGY Q G + EA+ +F  MQ   V  N 
Sbjct: 185 LNACAKCGDIDFARKMFDEMPERDHVTWNAMIAGYAQCGRSREALDVFHLMQMEGVKLNE 244

Query: 413 VTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDL 472
           V++  +LSAC  L  +  G+WVH  V+       + + TAL+DMYAKCGN+  A ++F  
Sbjct: 245 VSMVLVLSACTHLQVLDHGRWVHAYVERYKVRMTVTLGTALVDMYAKCGNVDRAMQVFWG 304

Query: 473 MSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREG 532
           M  ++  TW++ I G  ++G G E+L LF++M   G++P+G+TF+SVL  CS  GLV EG
Sbjct: 305 MKERNVYTWSSAIGGLAMNGFGEESLDLFNDMKREGVQPNGITFISVLKGCSVVGLVEEG 364

Query: 533 DEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACM 592
            + F SM + +G  P  EHY  MVD+ GRAG+L++AL FI  + + P    W ALL AC 
Sbjct: 365 RKHFDSMRNVYGIGPQLEHYGLMVDMYGRAGRLKEALNFINSMPMRPHVGAWSALLHACR 424

Query: 593 IHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGC 652
           ++K+  L  +A  K+ EL+ +N G +VLLSNIY+  +++   +++RQ +K + + K PGC
Sbjct: 425 MYKNKELGEIAQRKIVELEDKNDGAYVLLSNIYADYKNWESVSSLRQTMKAKGVKKLPGC 484

Query: 653 TLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELM 712
           ++IEV G  H F  GD+ HP+   I   LE+++  +R +G+   T   L D+EEEEKE  
Sbjct: 485 SVIEVDGEVHEFIVGDKSHPRYDEIEMKLEEISKCLRLSGYVANTNPVLFDIEEEEKEDA 544

Query: 713 MKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHH 772
           +  HSEK+AIAFGLI+ +    IR++ NLR+C DCH   K ISK+  R I+VRD NRFHH
Sbjct: 545 LSKHSEKVAIAFGLISLKGVVPIRVVMNLRICWDCHNVAKMISKIFNREIIVRDRNRFHH 604

Query: 773 FKGGVCSCGDYW 784
           FK G CSC DYW
Sbjct: 605 FKDGECSCKDYW 616



 Score =  129 bits (324), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 116/460 (25%), Positives = 187/460 (40%), Gaps = 79/460 (17%)

Query: 13  LSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATC--YARALFFSIPKP 70
           +SLL    T  ++ Q HAQ+++ G  N+     +    ++    T   YA  L      P
Sbjct: 13  ISLLNSCTTLKEMKQIHAQLVVKGILNNPHFHGQFVATIALHNTTNLDYANKLLNHNNNP 72

Query: 71  DLFLFNVIIRGFSNNEMPKSSICFYTHL--RKNTALTPDNFTYSFVLSAASACCDRSIGV 128
            LF  N +IR +S +  P  S  FY ++    N  L+PDN+T++F++   +       G+
Sbjct: 73  TLFTLNSMIRAYSKSSTPSKSFHFYANILHSNNNNLSPDNYTFTFLVRTCAQLQAHVTGL 132

Query: 129 LLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKS--------------------------- 161
            +HG  I  G+  D  V   LV +Y +   + S                           
Sbjct: 133 CVHGAVIKHGFELDPHVQTGLVFMYAELGCLSSCHNVFDGAVEPDLVTQTAMLNACAKCG 192

Query: 162 ----ARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVL 217
               ARK+FD+MPE+D V WN+MI+G  +    ++++ VF  +++  G  L+  S+  VL
Sbjct: 193 DIDFARKMFDEMPERDHVTWNAMIAGYAQCGRSREALDVF-HLMQMEGVKLNEVSMVLVL 251

Query: 218 PAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLI 277
            A   +Q L  G  +     +      V + T LV  Y+KCG V+RA  +F  +   ++ 
Sbjct: 252 SACTHLQVLDHGRWVHAYVERYKVRMTVTLGTALVDMYAKCGNVDRAMQVFWGMKERNVY 311

Query: 278 SCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFC 337
           + ++ I G   NG  E SL LF  +     + N  T +                      
Sbjct: 312 TWSSAIGGLAMNGFGEESLDLFNDMKREGVQPNGITFI---------------------- 349

Query: 338 LKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSE-----KSLASWNAMIAGYTQNGL 392
                    SVL   S V      +E  RK FD           L  +  M+  Y + G 
Sbjct: 350 ---------SVLKGCSVV----GLVEEGRKHFDSMRNVYGIGPQLEHYGLMVDMYGRAGR 396

Query: 393 TEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGK 432
            +EA++    M    + P+    S++L AC       LG+
Sbjct: 397 LKEALNFINSM---PMRPHVGAWSALLHACRMYKNKELGE 433



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 73/295 (24%), Positives = 135/295 (45%), Gaps = 40/295 (13%)

Query: 333 IHSFCLKSGIVSNSSV---LTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQ 389
           IH+  +  GI++N        A   +++  N ++ A KL + ++  +L + N+MI  Y++
Sbjct: 28  IHAQLVVKGILNNPHFHGQFVATIALHNTTN-LDYANKLLNHNNNPTLFTLNSMIRAYSK 86

Query: 390 NGLTEEAISLFQEM---QASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESN 446
           +    ++   +  +     + ++P+  T + ++  CAQL A   G  VH  V    FE +
Sbjct: 87  SSTPSKSFHFYANILHSNNNNLSPDNYTFTFLVRTCAQLQAHVTGLCVHGAVIKHGFELD 146

Query: 447 IYVSTALIDMY-------------------------------AKCGNIVEARELFDLMSH 475
            +V T L+ MY                               AKCG+I  AR++FD M  
Sbjct: 147 PHVQTGLVFMYAELGCLSSCHNVFDGAVEPDLVTQTAMLNACAKCGDIDFARKMFDEMPE 206

Query: 476 KSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEI 535
           +  VTWN MI+GY   G   EAL +F  M   G++ + V+ + VL AC+H  ++  G  +
Sbjct: 207 RDHVTWNAMIAGYAQCGRSREALDVFHLMQMEGVKLNEVSMVLVLSACTHLQVLDHGRWV 266

Query: 536 FQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGA 590
             + +  +  +        +VD+  + G +++A++   G+  E     W + +G 
Sbjct: 267 -HAYVERYKVRMTVTLGTALVDMYAKCGNVDRAMQVFWGMK-ERNVYTWSSAIGG 319


>gi|449516914|ref|XP_004165491.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At5g52630-like [Cucumis
           sativus]
          Length = 598

 Score =  409 bits (1052), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 220/572 (38%), Positives = 335/572 (58%), Gaps = 1/572 (0%)

Query: 213 VAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIV 272
           +  +L +    + LR G+++    LK G      V   L++ YSK      +  +F +  
Sbjct: 28  ICNLLLSFTRSRSLRQGLQLHAHILKFGLQTIPLVSHNLINLYSKTQLPLFSLQVFDETP 87

Query: 273 RPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNC 332
           +    + +++IS +  N     +L+ FR++L    R +                  +   
Sbjct: 88  KKSSTTWSSVISAFAQNEAPLLALQFFRRMLNDGVRPDDHIYPSATKACGFLRRSDVGKS 147

Query: 333 IHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGL 392
           +H   +K+G   +  V ++L  +Y++  E+  AR LFDE  E+++ SW+ MI GY Q   
Sbjct: 148 VHCLAVKTGYYCDVFVGSSLVDMYAKCGEIGDARHLFDEMPERNVVSWSGMIYGYAQLDD 207

Query: 393 TEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTA 452
             EA++LF++     V  N  T SS++  C+    + LGK +H L    +F+S+ +V +A
Sbjct: 208 GVEALTLFKQALIEDVDVNDFTFSSVIRVCSSSTFLELGKLIHGLCLKMSFDSSSFVGSA 267

Query: 453 LIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPS 512
           LI +Y+KCG I  A ++FD +  ++   WN+M+     H H      LF EM + G++P+
Sbjct: 268 LISLYSKCGVIEGAYQVFDEIPTRNLGLWNSMLIACAQHAHTQRVFGLFEEMGNVGMKPN 327

Query: 513 GVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFI 572
            + FLSVLYACSHAGLV +G E F S++ D+G +P  EHYA +VD+LGRAG+L++A+  I
Sbjct: 328 FIXFLSVLYACSHAGLVEKGREYF-SLMRDYGIEPETEHYASLVDLLGRAGKLQEAVSVI 386

Query: 573 KGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYL 632
           K + + P  +VWGALL  C IHKDT +A   ++++ E+D  + G HVLLSN Y+A   Y 
Sbjct: 387 KQMPMRPTESVWGALLTGCRIHKDTEMAAFVADRILEMDSSSSGLHVLLSNAYAAAGRYE 446

Query: 633 QAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAG 692
           +AA +R++++ R + K  G + +E G   H FT+GD+ H +   IY  LE+L  +M +AG
Sbjct: 447 EAARMRKMLRDRGVKKETGLSWVEEGNKVHTFTAGDRSHAKWVEIYEKLEELEEEMEKAG 506

Query: 693 FQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATK 752
           +  +T   L  V+ EEK   ++ HSE+LAIAFGLI   PG  IR++KNLRVC DCH A K
Sbjct: 507 YVADTSFVLRAVDGEEKNETIRYHSERLAIAFGLITFPPGRPIRVMKNLRVCGDCHAAIK 566

Query: 753 FISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           F+SK  GRV++VRD NRFH F+ G CSCGDYW
Sbjct: 567 FMSKCCGRVLIVRDNNRFHRFEDGKCSCGDYW 598



 Score =  172 bits (436), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 122/422 (28%), Positives = 200/422 (47%), Gaps = 6/422 (1%)

Query: 127 GVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMK 186
           G+ LH H +  G  +   V   L++LY K      + +VFD+ P+K +  W+S+IS   +
Sbjct: 44  GLQLHAHILKFGLQTIPLVSHNLINLYSKTQLPLFSLQVFDETPKKSSTTWSSVISAFAQ 103

Query: 187 NCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVY 246
           N     ++  F  M+ N G   D     +   A   ++   +G  + CL +K G++  V+
Sbjct: 104 NEAPLLALQFFRRML-NDGVRPDDHIYPSATKACGFLRRSDVGKSVHCLAVKTGYYCDVF 162

Query: 247 VLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASA 306
           V + LV  Y+KCGE+  A  LF ++   +++S + MI GY        +L LF+Q L   
Sbjct: 163 VGSSLVDMYAKCGEIGDARHLFDEMPERNVVSWSGMIYGYAQLDDGVEALTLFKQALIED 222

Query: 307 ERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAAR 366
             VN  T   +I V      L L   IH  CLK    S+S V +AL ++YS+   +E A 
Sbjct: 223 VDVNDFTFSSVIRVCSSSTFLELGKLIHGLCLKMSFDSSSFVGSALISLYSKCGVIEGAY 282

Query: 367 KLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLG 426
           ++FDE   ++L  WN+M+    Q+  T+    LF+EM    + PN +   S+L AC+  G
Sbjct: 283 QVFDEIPTRNLGLWNSMLIACAQHAHTQRVFGLFEEMGNVGMKPNFIXFLSVLYACSHAG 342

Query: 427 AISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHK-SEVTWNTMI 485
            +  G+    L++    E       +L+D+  + G + EA  +   M  + +E  W  ++
Sbjct: 343 LVEKGREYFSLMRDYGIEPETEHYASLVDLLGRAGKLQEAVSVIKQMPMRPTESVWGALL 402

Query: 486 SGYGLHGHGLEALQLFSEMLHSGIRPSGV-TFLSVLYACSHAGLVREGDEIFQSMIHDHG 544
           +G  +H     A  +   +L      SG+   LS  YA   AG   E   + + M+ D G
Sbjct: 403 TGCRIHKDTEMAAFVADRILEMDSSSSGLHVLLSNAYAA--AGRYEEAARM-RKMLRDRG 459

Query: 545 FK 546
            K
Sbjct: 460 VK 461



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 103/395 (26%), Positives = 178/395 (45%), Gaps = 18/395 (4%)

Query: 10  NLFLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRL----SDFKATCYARALFF 65
           NL LS  + +++  Q  Q HA I+  G Q    T+  ++H L    S  +   ++  +F 
Sbjct: 30  NLLLSFTR-SRSLRQGLQLHAHILKFGLQ----TIPLVSHNLINLYSKTQLPLFSLQVFD 84

Query: 66  SIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRS 125
             PK     ++ +I  F+ NE P  ++ F+  +  N  + PD+  Y     A        
Sbjct: 85  ETPKKSSTTWSSVISAFAQNEAPLLALQFFRRML-NDGVRPDDHIYPSATKACGFLRRSD 143

Query: 126 IGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLM 185
           +G  +H  A+ +GY  D+FVG++LVD+Y K   +  AR +FD+MPE++ V W+ MI G  
Sbjct: 144 VGKSVHCLAVKTGYYCDVFVGSSLVDMYAKCGEIGDARHLFDEMPERNVVSWSGMIYGYA 203

Query: 186 KNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHV 245
           +     +++ +F   +       D T  ++V+   +    L LG  I  L LK+ F    
Sbjct: 204 QLDDGVEALTLFKQALIEDVDVNDFT-FSSVIRVCSSSTFLELGKLIHGLCLKMSFDSSS 262

Query: 246 YVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLAS 305
           +V + L+S YSKCG +E A  +F +I   +L   N+M+     +  T+    LF ++   
Sbjct: 263 FVGSALISLYSKCGVIEGAYQVFDEIPTRNLGLWNSMLIACAQHAHTQRVFGLFEEMGNV 322

Query: 306 AERVNSSTIVGLIPVFYPFGHLHLTNC---IHSFCLKSGIVSNSSVLTALSTVYSRLNEM 362
             + N    +  + V Y   H  L        S     GI   +    +L  +  R  ++
Sbjct: 323 GMKPN---FIXFLSVLYACSHAGLVEKGREYFSLMRDYGIEPETEHYASLVDLLGRAGKL 379

Query: 363 EAARKLFDESSEKSLAS-WNAMIAGYTQNGLTEEA 396
           + A  +  +   +   S W A++ G   +  TE A
Sbjct: 380 QEAVSVIKQMPMRPTESVWGALLTGCRIHKDTEMA 414


>gi|224120376|ref|XP_002318314.1| predicted protein [Populus trichocarpa]
 gi|222858987|gb|EEE96534.1| predicted protein [Populus trichocarpa]
          Length = 539

 Score =  409 bits (1052), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 211/530 (39%), Positives = 304/530 (57%), Gaps = 53/530 (10%)

Query: 308 RVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARK 367
           R +  ++V ++P     G       +H   ++SG   +  V  AL  +Y++   ++ A K
Sbjct: 10  RPDVVSLVNVLPACASMGAWLHGKAVHGIAVRSGSFEDLFVGNALVDMYAKCGMVDEASK 69

Query: 368 LFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEM------------------------ 403
           +FD   EK + SWNAM+ GY+Q G  E+A+ LF++M                        
Sbjct: 70  VFDRIKEKDVVSWNAMVNGYSQIGRFEDALGLFEKMREENIELNVVSWSAVIAAFAQRGL 129

Query: 404 ----------------------------QASKVAPNPVTVSSILSACAQLGAISLGKWVH 435
                                       Q   V PN  T+S  L ACA+L A+ LG+ +H
Sbjct: 130 GCETLDVFREMQHGEANDALELFSWMFKQDGLVKPNCFTISCALIACARLAALRLGRQIH 189

Query: 436 ELVKSRNFESN-IYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHG 494
             +   +F+S  +YV+  LIDMYAK G+I  AR +FD +  K+ V+W ++++GYG+HG G
Sbjct: 190 AYILRNHFDSAFLYVANCLIDMYAKSGDIDVARFVFDNLKQKNFVSWTSLMTGYGMHGRG 249

Query: 495 LEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYAC 554
            EAL++F EM   G++P GVT L VLYACSH+G++ +G E F SM  + G  P  EHYAC
Sbjct: 250 KEALEVFDEMRRVGLQPDGVTLLVVLYACSHSGMIDQGIEFFNSMSKEFGVIPGQEHYAC 309

Query: 555 MVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPEN 614
           MVD+LGRAG+L +A+E I+G+ +EP   VW ALL  C IH +  L   A+++L EL+ EN
Sbjct: 310 MVDLLGRAGRLNEAMELIEGMQMEPSSIVWVALLSGCRIHANVELGEHAAKQLLELNSEN 369

Query: 615 VGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQS 674
            G + LLSNIY+  R +   A VR ++K   + K PGC+ ++       F   D+ HPQS
Sbjct: 370 DGSYTLLSNIYANARRWKDVARVRSLMKNSGIRKRPGCSWVQGKKGTTTFYVADKTHPQS 429

Query: 675 TAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTE 734
             IY +L  L  +++  G+  ET  ALHDV++EEK  ++  HSEKLA+A+G++ + PG  
Sbjct: 430 KQIYEILRSLTQRIKVLGYVPETSFALHDVDDEEKVDLLFEHSEKLALAYGILISAPGAP 489

Query: 735 IRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           IRI KNLRVC DCH A  +IS +    I++RD++RFHHFK G CSC  YW
Sbjct: 490 IRITKNLRVCGDCHNAITYISMIIDHEIILRDSSRFHHFKKGSCSCSGYW 539



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 90/370 (24%), Positives = 159/370 (42%), Gaps = 56/370 (15%)

Query: 209 DSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLF 268
           D  S+  VLPA A +     G  +  + ++ G  + ++V   LV  Y+KCG V+ A  +F
Sbjct: 12  DVVSLVNVLPACASMGAWLHGKAVHGIAVRSGSFEDLFVGNALVDMYAKCGMVDEASKVF 71

Query: 269 RDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFG--- 325
             I   D++S NAM++GY+  G+ E +L LF ++      +N  +   +I  F   G   
Sbjct: 72  DRIKEKDVVSWNAMVNGYSQIGRFEDALGLFEKMREENIELNVVSWSAVIAAFAQRGLGC 131

Query: 326 ----------------------------HLHLTNC---------------------IHSF 336
                                        L   NC                     IH++
Sbjct: 132 ETLDVFREMQHGEANDALELFSWMFKQDGLVKPNCFTISCALIACARLAALRLGRQIHAY 191

Query: 337 CLKSGIVSNS-SVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEE 395
            L++   S    V   L  +Y++  +++ AR +FD   +K+  SW +++ GY  +G  +E
Sbjct: 192 ILRNHFDSAFLYVANCLIDMYAKSGDIDVARFVFDNLKQKNFVSWTSLMTGYGMHGRGKE 251

Query: 396 AISLFQEMQASKVAPNPVTVSSILSACAQLGAISLG-KWVHELVKSRNFESNIYVSTALI 454
           A+ +F EM+   + P+ VT+  +L AC+  G I  G ++ + + K             ++
Sbjct: 252 ALEVFDEMRRVGLQPDGVTLLVVLYACSHSGMIDQGIEFFNSMSKEFGVIPGQEHYACMV 311

Query: 455 DMYAKCGNIVEARELFDLMSHK-SEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSG 513
           D+  + G + EA EL + M  + S + W  ++SG  +H +         ++L       G
Sbjct: 312 DLLGRAGRLNEAMELIEGMQMEPSSIVWVALLSGCRIHANVELGEHAAKQLLELNSENDG 371

Query: 514 -VTFLSVLYA 522
             T LS +YA
Sbjct: 372 SYTLLSNIYA 381



 Score = 96.3 bits (238), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 99/409 (24%), Positives = 170/409 (41%), Gaps = 95/409 (23%)

Query: 104 LTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSAR 163
           + PD  +   VL A ++      G  +HG A+ SG   DLFVG ALVD+Y K   V  A 
Sbjct: 9   MRPDVVSLVNVLPACASMGAWLHGKAVHGIAVRSGSFEDLFVGNALVDMYAKCGMVDEAS 68

Query: 164 KVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAE- 222
           KVFD++ EKD V WN+M++G  +   F+D++ +F  M R     L+  S +AV+ A A+ 
Sbjct: 69  KVFDRIKEKDVVSWNAMVNGYSQIGRFEDALGLFEKM-REENIELNVVSWSAVIAAFAQR 127

Query: 223 ---------VQELRLG-----------------------MEIQC--------LGLKLGFH 242
                     +E++ G                         I C          L+LG  
Sbjct: 128 GLGCETLDVFREMQHGEANDALELFSWMFKQDGLVKPNCFTISCALIACARLAALRLGRQ 187

Query: 243 DHVYVLTG------------LVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNG 290
            H Y+L              L+  Y+K G+++ A  +F ++ + + +S  ++++GY  +G
Sbjct: 188 IHAYILRNHFDSAFLYVANCLIDMYAKSGDIDVARFVFDNLKQKNFVSWTSLMTGYGMHG 247

Query: 291 KTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLT 350
           + + +L +F ++     + +  T   L+ V Y         C HS  +  GI        
Sbjct: 248 RGKEALEVFDEMRRVGLQPDGVT---LLVVLYA--------CSHSGMIDQGI----EFFN 292

Query: 351 ALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAP 410
           ++S  +  +   E                +  M+    + G   EA+ L + MQ   + P
Sbjct: 293 SMSKEFGVIPGQE---------------HYACMVDLLGRAGRLNEAMELIEGMQ---MEP 334

Query: 411 NPVTVSSILSACAQLGAISLGKWVHELVKSRNFE--------SNIYVST 451
           + +   ++LS C     + LG+   + +   N E        SNIY + 
Sbjct: 335 SSIVWVALLSGCRIHANVELGEHAAKQLLELNSENDGSYTLLSNIYANA 383



 Score = 59.3 bits (142), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 51/233 (21%), Positives = 105/233 (45%), Gaps = 22/233 (9%)

Query: 338 LKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAI 397
           ++  +VS  +VL A +++ + L+            S + L   NA++  Y + G+ +EA 
Sbjct: 9   MRPDVVSLVNVLPACASMGAWLHGKAVHGIAVRSGSFEDLFVGNALVDMYAKCGMVDEAS 68

Query: 398 SLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMY 457
            +F  ++   V    V+ +++++  +Q+G       + E ++  N E N+   +A+I  +
Sbjct: 69  KVFDRIKEKDV----VSWNAMVNGYSQIGRFEDALGLFEKMREENIELNVVSWSAVIAAF 124

Query: 458 AKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSG--IRPSGVT 515
           A+ G   E  ++F  M                 HG   +AL+LFS M      ++P+  T
Sbjct: 125 AQRGLGCETLDVFREMQ----------------HGEANDALELFSWMFKQDGLVKPNCFT 168

Query: 516 FLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKA 568
               L AC+    +R G +I   ++ +H          C++D+  ++G ++ A
Sbjct: 169 ISCALIACARLAALRLGRQIHAYILRNHFDSAFLYVANCLIDMYAKSGDIDVA 221



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 58/245 (23%), Positives = 109/245 (44%), Gaps = 5/245 (2%)

Query: 78  IIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVS 137
           + R   + E   +   F    +++  + P+ FT S  L A +      +G  +H + + +
Sbjct: 136 VFREMQHGEANDALELFSWMFKQDGLVKPNCFTISCALIACARLAALRLGRQIHAYILRN 195

Query: 138 GYGSD-LFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWV 196
            + S  L+V   L+D+Y K   +  AR VFD + +K+ V W S+++G   +   ++++ V
Sbjct: 196 HFDSAFLYVANCLIDMYAKSGDIDVARFVFDNLKQKNFVSWTSLMTGYGMHGRGKEALEV 255

Query: 197 FGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGME-IQCLGLKLGFHDHVYVLTGLVSFY 255
           F +M R  G   D  ++  VL A +    +  G+E    +  + G          +V   
Sbjct: 256 FDEM-RRVGLQPDGVTLLVVLYACSHSGMIDQGIEFFNSMSKEFGVIPGQEHYACMVDLL 314

Query: 256 SKCGEVERA-ELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLA-SAERVNSST 313
            + G +  A EL+    + P  I   A++SG   +   E      +QLL  ++E   S T
Sbjct: 315 GRAGRLNEAMELIEGMQMEPSSIVWVALLSGCRIHANVELGEHAAKQLLELNSENDGSYT 374

Query: 314 IVGLI 318
           ++  I
Sbjct: 375 LLSNI 379


>gi|224140235|ref|XP_002323489.1| predicted protein [Populus trichocarpa]
 gi|222868119|gb|EEF05250.1| predicted protein [Populus trichocarpa]
          Length = 915

 Score =  409 bits (1052), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 238/761 (31%), Positives = 400/761 (52%), Gaps = 37/761 (4%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           A  +F  +  PD+  ++ +I  FS       +I  +  +R  + + P+ +++  +L+A  
Sbjct: 156 AYEVFMGMSTPDVVSYSALISSFSKLNRETEAIQLFFRMRI-SGIEPNEYSFVAILTACI 214

Query: 120 ACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNS 179
              +  +G+ +H  AI  GY   +FV  AL+ LY K   +  A  +FD+MP++D   WN+
Sbjct: 215 RSLELEMGLQVHALAIKLGYSQLVFVANALIGLYGKCGCLDHAIHLFDEMPQRDIASWNT 274

Query: 180 MISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKL 239
           MIS L+K   ++ ++ +F  + +N G   D  +++ +L A A       G EI    +++
Sbjct: 275 MISSLVKGLSYEKALELFRVLNQNKGFKADQFTLSTLLTACARCHARIQGREIHAYAIRI 334

Query: 240 GFHDHVYVLTGLVSFYSKCGEVERAELLF-----RDIV---------------------- 272
           G  +++ V   ++ FY++CG +     LF     RDI+                      
Sbjct: 335 GLENNLSVSNAIIGFYTRCGSLNHVAALFERMPVRDIITWTEMITAYMEFGLVDLAVDMF 394

Query: 273 ----RPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLH 328
                 + +S NA+++G+  N +   +L LF +++     +   T+ G+I        L 
Sbjct: 395 NKMPEKNSVSYNALLTGFCKNNEGLKALNLFVRMVQEGAELTDFTLTGVINACGLLLKLE 454

Query: 329 LTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLAS--WNAMIAG 386
           ++  IH F +K G  SN+ +  AL  + S+   M+ A ++F   S     S    +MI G
Sbjct: 455 ISRQIHGFIIKFGFRSNACIEAALIDMCSKCGRMDDADRMFQSLSTDGGNSIIQTSMICG 514

Query: 387 YTQNGLTEEAISLFQEMQAS-KVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFES 445
           Y +NGL EEAI LF   Q+   +  + V  +SIL  C  LG   +GK +H       F +
Sbjct: 515 YARNGLPEEAICLFYRCQSEGTMVLDEVAFTSILGVCGTLGFHEVGKQIHCQALKTGFHA 574

Query: 446 NIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEML 505
            + V  ++I MY+KC NI +A + F+ M     V+WN +I+G  LH  G EAL ++S M 
Sbjct: 575 ELGVGNSIISMYSKCYNIDDAIKAFNTMPGHDVVSWNGLIAGQLLHRQGDEALAIWSSME 634

Query: 506 HSGIRPSGVTFLSVL--YACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAG 563
            +GI+P  +TF+ ++  Y  + + L+ E   +F SM   H  +P +EHYA +V +LG  G
Sbjct: 635 KAGIKPDAITFVLIVSAYKFTSSNLLDECRSLFLSMKMIHDLEPTSEHYASLVGVLGYWG 694

Query: 564 QLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSN 623
            LE+A E I  +  +P  +VW ALL  C +H +T++ +  ++ +  ++P +   +VL+SN
Sbjct: 695 LLEEAEELINKMPFDPEVSVWRALLDGCRLHANTSIGKRVAKHIIGMEPRDPSTYVLVSN 754

Query: 624 IYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEK 683
           +Y+A   +  +  VR+ ++ R L K P  + + +    H F + D+ HPQS  IY+ L+ 
Sbjct: 755 LYAASGRWHCSEMVRENMRDRGLRKHPCRSWVIIKKQLHTFYARDKSHPQSNDIYSGLDI 814

Query: 684 LNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRV 743
           L  K  +AG++ +    L +VEE++K+  +  HS KLA  +GL+ T PG  IR++KN+ +
Sbjct: 815 LILKCLKAGYEPDMSFVLQEVEEQQKKDFLFYHSAKLAATYGLLKTRPGEPIRVVKNILL 874

Query: 744 CLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           C DCHT  K+ + VT R I+ RDA+ FH F  G CSC  YW
Sbjct: 875 CRDCHTFLKYATVVTQREIIFRDASGFHCFSNGQCSCKGYW 915


>gi|356528388|ref|XP_003532785.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
           mitochondrial-like [Glycine max]
          Length = 721

 Score =  409 bits (1052), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 236/729 (32%), Positives = 372/729 (51%), Gaps = 85/729 (11%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           ARA+F  IP P + L+ +++  ++ N   + +I  +  +        D  +++ ++    
Sbjct: 74  ARAIFDQIPTPHVSLYTIMLHAYAQNHRLREAIDLFRRIP-----FKDVVSWNSIIKGCL 128

Query: 120 ACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNS 179
            C D                                   + +ARK+FD+MP +  V W +
Sbjct: 129 HCGD-----------------------------------IVTARKLFDEMPRRTVVSWTT 153

Query: 180 MISGLMKNCCFQDS---IWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLG 236
           ++ GL++    Q++    W    M R+   W                             
Sbjct: 154 LVDGLLRLGIVQEAETLFWAMEPMDRDVAAW----------------------------- 184

Query: 237 LKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSL 296
                         ++  Y   G V+ A  LF  +   D+IS ++MI+G   NGK+E +L
Sbjct: 185 ------------NAMIHGYCSNGRVDDALQLFCQMPSRDVISWSSMIAGLDHNGKSEQAL 232

Query: 297 RLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTA-LSTV 355
            LFR ++AS   ++S  +V  +          +   IH    K G       ++A L T 
Sbjct: 233 VLFRDMVASGVCLSSGVLVCGLSAAAKIPAWRVGIQIHCSVFKLGDWHFDEFVSASLVTF 292

Query: 356 YSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTV 415
           Y+   +MEAA ++F E   KS+  W A++ GY  N    EA+ +F EM    V PN  + 
Sbjct: 293 YAGCKQMEAACRVFGEVVYKSVVIWTALLTGYGLNDKHREALEVFGEMMRIDVVPNESSF 352

Query: 416 SSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSH 475
           +S L++C  L  I  GK +H        ES  YV  +L+ MY+KCG + +A  +F  ++ 
Sbjct: 353 TSALNSCCGLEDIERGKVIHAAAVKMGLESGGYVGGSLVVMYSKCGYVSDAVYVFKGINE 412

Query: 476 KSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEI 535
           K+ V+WN++I G   HG G+ AL LF++ML  G+ P G+T   +L ACSH+G++++    
Sbjct: 413 KNVVSWNSVIVGCAQHGCGMWALALFNQMLREGVDPDGITVTGLLSACSHSGMLQKARCF 472

Query: 536 FQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHK 595
           F+            EHY  MVD+LGR G+LE+A   +  + ++    VW ALL AC  H 
Sbjct: 473 FRYFGQKRSVTLTIEHYTSMVDVLGRCGELEEAEAVVMSMPMKANSMVWLALLSACRKHS 532

Query: 596 DTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLI 655
           + +LA+ A+ ++FE++P+    +VLLSN+Y++   + + A +R+ +K   + K PG + +
Sbjct: 533 NLDLAKRAANQIFEIEPDCSAAYVLLSNLYASSSRWAEVALIRRKMKHNGVVKKPGSSWL 592

Query: 656 EVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKV 715
            + G  H F S D+ HP +  IY  LE L  K++E G+  +   ALHDVE E+KE M+  
Sbjct: 593 TLKGQKHKFLSADRSHPLAEKIYQKLEWLGVKLKELGYVPDQQFALHDVETEQKEEMLSY 652

Query: 716 HSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKG 775
           HSE+LAIAFGL++T  G+ I ++KNLRVC DCH A K ++K+  R IVVRD++RFH FK 
Sbjct: 653 HSERLAIAFGLLSTVEGSAITVMKNLRVCGDCHNAIKLMAKIVDREIVVRDSSRFHDFKN 712

Query: 776 GVCSCGDYW 784
           G+CSCGDYW
Sbjct: 713 GICSCGDYW 721



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 49/181 (27%), Positives = 83/181 (45%), Gaps = 14/181 (7%)

Query: 362 MEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSA 421
           ++ AR +FD+     ++ +  M+  Y QN    EAI LF+ +    V    V+ +SI+  
Sbjct: 71  LDEARAIFDQIPTPHVSLYTIMLHAYAQNHRLREAIDLFRRIPFKDV----VSWNSIIKG 126

Query: 422 CAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMS--HKSEV 479
           C   G I   + + + +  R   S     T L+D   + G + EA  LF  M    +   
Sbjct: 127 CLHCGDIVTARKLFDEMPRRTVVS----WTTLVDGLLRLGIVQEAETLFWAMEPMDRDVA 182

Query: 480 TWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSM 539
            WN MI GY  +G   +ALQLF +M    +    +++ S++    H G   +   +F+ M
Sbjct: 183 AWNAMIHGYCSNGRVDDALQLFCQMPSRDV----ISWSSMIAGLDHNGKSEQALVLFRDM 238

Query: 540 I 540
           +
Sbjct: 239 V 239


>gi|147812499|emb|CAN61868.1| hypothetical protein VITISV_002466 [Vitis vinifera]
          Length = 440

 Score =  409 bits (1052), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 191/437 (43%), Positives = 287/437 (65%)

Query: 348 VLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASK 407
           V  AL  +Y++    + A  +F++ ++K + SW +++ G   NG  EEA+ LF EM+   
Sbjct: 4   VNNALVDMYAKXGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSYEEALRLFCEMRIMG 63

Query: 408 VAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEAR 467
           + P+ + ++++LSACA+L  +  GK VH         S++ V  +L+ MYAKCG I +A 
Sbjct: 64  IHPDQIVIAAVLSACAELTVLEFGKQVHANFLKSGLGSSLSVDNSLVSMYAKCGCIEDAN 123

Query: 468 ELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAG 527
           ++FD M  +  +TW  +I GY  +G G E+L  +++M+ SG++P  +TF+ +L+ACSHAG
Sbjct: 124 KVFDSMEIQDVITWTALIVGYAQNGRGRESLNFYNBMIASGVKPDFITFIGLLFACSHAG 183

Query: 528 LVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGAL 587
           LV  G   FQSM   +G KP  EHYACM+D+LGR+G+L +A E +  +AV+P   VW AL
Sbjct: 184 LVEHGRSYFQSMEEVYGIKPGPEHYACMIDLLGRSGKLMEAKELLNQMAVQPDATVWKAL 243

Query: 588 LGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLA 647
           L AC +H +  L   A+  LFEL+P+N   +VLLSN+YSA   + +AA  R+++K R ++
Sbjct: 244 LAACRVHGNVELGERAANNLFELEPKNAVPYVLLSNLYSAAGKWEEAAKTRRLMKLRGVS 303

Query: 648 KAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEE 707
           K PGC+ IE+    H F S D+ HP++  IY+ ++++   ++EAG+  +   ALHD++EE
Sbjct: 304 KEPGCSWIEMSSKVHRFMSEDRSHPRTAEIYSKVDEIMILIKEAGYVPDMNFALHDMDEE 363

Query: 708 EKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDA 767
            KEL +  HSEKLA+AFGL+   PG  IRI KNLR+C DCHTA K++S V  R +++RD+
Sbjct: 364 GKELGLAYHSEKLAVAFGLLTMPPGAPIRIFKNLRICGDCHTAMKYVSGVFHRHVILRDS 423

Query: 768 NRFHHFKGGVCSCGDYW 784
           N FHHF+ G CSC DYW
Sbjct: 424 NCFHHFREGACSCSDYW 440



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 68/249 (27%), Positives = 128/249 (51%), Gaps = 2/249 (0%)

Query: 247 VLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASA 306
           V   LV  Y+K G  + A  +F  +   D+IS  ++++G   NG  E +LRLF ++    
Sbjct: 4   VNNALVDMYAKXGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSYEEALRLFCEMRIMG 63

Query: 307 ERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAAR 366
              +   I  ++        L     +H+  LKSG+ S+ SV  +L ++Y++   +E A 
Sbjct: 64  IHPDQIVIAAVLSACAELTVLEFGKQVHANFLKSGLGSSLSVDNSLVSMYAKCGCIEDAN 123

Query: 367 KLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLG 426
           K+FD    + + +W A+I GY QNG   E+++ + +M AS V P+ +T   +L AC+  G
Sbjct: 124 KVFDSMEIQDVITWTALIVGYAQNGRGRESLNFYNBMIASGVKPDFITFIGLLFACSHAG 183

Query: 427 AISLGK-WVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVT-WNTM 484
            +  G+ +   + +    +        +ID+  + G ++EA+EL + M+ + + T W  +
Sbjct: 184 LVEHGRSYFQSMEEVYGIKPGPEHYACMIDLLGRSGKLMEAKELLNQMAVQPDATVWKAL 243

Query: 485 ISGYGLHGH 493
           ++   +HG+
Sbjct: 244 LAACRVHGN 252



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 89/305 (29%), Positives = 148/305 (48%), Gaps = 16/305 (5%)

Query: 144 FVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRN 203
            V  ALVD+Y K  +   A  VF+KM +KD + W S+++G + N  +++++ +F +M R 
Sbjct: 3   LVNNALVDMYAKXGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSYEEALRLFCEM-RI 61

Query: 204 GGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVER 263
            G   D   +AAVL A AE+  L  G ++    LK G    + V   LVS Y+KCG +E 
Sbjct: 62  MGIHPDQIVIAAVLSACAELTVLEFGKQVHANFLKSGLGSSLSVDNSLVSMYAKCGCIED 121

Query: 264 AELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYP 323
           A  +F  +   D+I+  A+I GY  NG+   SL  +  ++AS  + +  T +GL+     
Sbjct: 122 ANKVFDSMEIQDVITWTALIVGYAQNGRGRESLNFYNBMIASGVKPDFITFIGLLFACSH 181

Query: 324 FGHL-HLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLAS-WN 381
            G + H  +   S     GI         +  +  R  ++  A++L ++ + +  A+ W 
Sbjct: 182 AGLVEHGRSYFQSMEEVYGIKPGPEHYACMIDLLGRSGKLMEAKELLNQMAVQPDATVWK 241

Query: 382 AMIAGYTQNG---LTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELV 438
           A++A    +G   L E A +   E++     P  V +S++ SA         GKW  E  
Sbjct: 242 ALLAACRVHGNVELGERAANNLFELEPKNAVPY-VLLSNLYSAA--------GKW-EEAA 291

Query: 439 KSRNF 443
           K+R  
Sbjct: 292 KTRRL 296



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 63/251 (25%), Positives = 113/251 (45%), Gaps = 12/251 (4%)

Query: 59  YARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAA 118
           YA  +F  +   D+  +  ++ G  +N   + ++  +  +R    + PD    + VLSA 
Sbjct: 20  YAFDVFEKMTDKDVISWTSLVTGCVHNGSYEEALRLFCEMRI-MGIHPDQIVIAAVLSAC 78

Query: 119 SACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWN 178
           +       G  +H + + SG GS L V  +LV +Y K   ++ A KVFD M  +D + W 
Sbjct: 79  AELTVLEFGKQVHANFLKSGLGSSLSVDNSLVSMYAKCGCIEDANKVFDSMEIQDVITWT 138

Query: 179 SMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLG------MEI 232
           ++I G  +N   ++S+  + BM+ + G   D  +   +L A +    +  G      ME 
Sbjct: 139 ALIVGYAQNGRGRESLNFYNBMIAS-GVKPDFITFIGLLFACSHAGLVEHGRSYFQSME- 196

Query: 233 QCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKT 292
           +  G+K G  +H   +  L+    K   +E  ELL +  V+PD     A+++    +G  
Sbjct: 197 EVYGIKPG-PEHYACMIDLLGRSGKL--MEAKELLNQMAVQPDATVWKALLAACRVHGNV 253

Query: 293 ESSLRLFRQLL 303
           E   R    L 
Sbjct: 254 ELGERAANNLF 264


>gi|302763721|ref|XP_002965282.1| hypothetical protein SELMODRAFT_83339 [Selaginella moellendorffii]
 gi|300167515|gb|EFJ34120.1| hypothetical protein SELMODRAFT_83339 [Selaginella moellendorffii]
          Length = 721

 Score =  409 bits (1051), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 235/680 (34%), Positives = 368/680 (54%), Gaps = 18/680 (2%)

Query: 116 SAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTV 175
           +A  +C D +   ++H     +G GS  ++   LV +  K   +  AR +FD +  K+  
Sbjct: 49  AAIRSCKDSNSVSIIHQKITRAGLGSSAYLNNLLVLMLAKHGSLCEARSIFDAIQHKNIF 108

Query: 176 LWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQC- 234
            WN +IS          ++ +F  M         + + A  L A + + +L+ G EI   
Sbjct: 109 SWNIIISAYAHRGHPSTALHLFAKM----DVPPTAMTFATALSACSSLGDLQRGREIHAR 164

Query: 235 LGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTE- 293
           +    G    V + T + S Y+KCG++  A+ +F  I   +++S NA+I+ Y  +G +  
Sbjct: 165 IKASRGIRPSVILDTAIFSMYAKCGDLSTAKSVFDRIPAKNVVSWNALIAAYAQSGHSHH 224

Query: 294 SSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGI---VSNSSVLT 350
            +L LF ++     R   +T VG++        L     IH+  +++G+   V +  V  
Sbjct: 225 QALDLFEKMAEHGVRPCRATFVGVLGACNDVTSLEK---IHARIVETGLQFDVRDVGVQN 281

Query: 351 ALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAP 410
           AL  +Y++   +E AR +F +   +   S N MIA + Q GL +E+I +F+EM    +  
Sbjct: 282 ALLNMYAKCGSLEVARDIFRKMQRRDQVSMNVMIATFAQQGLGKESIQVFREMDLEGLPQ 341

Query: 411 NPVTVSSILSACAQLGAISLGKWVHELV-----KSRNFESNIYVSTALIDMYAKCGNIVE 465
           +  T +S+++AC+  GA+  GK +H+ V       +    N+ V TAL+ MY KCG + +
Sbjct: 342 DDTTFASVITACSCCGALEFGKRIHKRVVEPVLGRKCCLPNVVVETALVSMYGKCGTLEQ 401

Query: 466 ARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSH 525
           A+ +F  M+ K+ V+WN M++     G G EA          G+     +F+SVL ACSH
Sbjct: 402 AKAVFKAMTTKNSVSWNAMLAACAHQGQGDEAAAFLRAAACEGVELDSASFISVLIACSH 461

Query: 526 AGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWG 585
           +G++    + FQ M+ D    P AE+Y CMVD+L R+G+L  A E +  +   P    W 
Sbjct: 462 SGMLEVAYDHFQLMLSDFDLVPAAENYRCMVDLLARSGRLGDADELMNSMPFSPDAIAWR 521

Query: 586 ALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRK 645
            LLG C +      A  A+E+ F L+P+N   + LLS++YSA     +   +R  +K+R 
Sbjct: 522 TLLGGCRVQGSLENAASAAEQAFNLEPQNTAPYTLLSSLYSATGKKDELVELRSSMKERG 581

Query: 646 LAK-APGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDV 704
           L K  PG ++IEV G  H F +GD  HPQ   I   L+ LN ++++AGF   T   +HD+
Sbjct: 582 LRKLVPGRSVIEVHGRVHEFVAGDSSHPQIDKILRELDILNVELKQAGFVPSTDGVVHDL 641

Query: 705 EEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVV 764
           + E+KE ++ +HSEKLA+AFGLI+T+ G  + ++KNLRVC DCH A K ISK+  RVI V
Sbjct: 642 KTEDKEEILALHSEKLAVAFGLISTKSGIPLLVLKNLRVCSDCHGAIKLISKLRSRVITV 701

Query: 765 RDANRFHHFKGGVCSCGDYW 784
           RDANRFH F+ G CSCGDYW
Sbjct: 702 RDANRFHRFQSGTCSCGDYW 721



 Score =  152 bits (384), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 145/587 (24%), Positives = 270/587 (45%), Gaps = 43/587 (7%)

Query: 12  FLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPD 71
           F + ++  K  + ++  H +I   G  +       L   L+   + C AR++F +I   +
Sbjct: 47  FAAAIRSCKDSNSVSIIHQKITRAGLGSSAYLNNLLVLMLAKHGSLCEARSIFDAIQHKN 106

Query: 72  LFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLH 131
           +F +N+II  +++   P +++    HL     + P   T++  LSA S+  D   G  +H
Sbjct: 107 IFSWNIIISAYAHRGHPSTAL----HLFAKMDVPPTAMTFATALSACSSLGDLQRGREIH 162

Query: 132 GHAIVS-GYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNC-C 189
                S G    + +  A+  +Y K   + +A+ VFD++P K+ V WN++I+   ++   
Sbjct: 163 ARIKASRGIRPSVILDTAIFSMYAKCGDLSTAKSVFDRIPAKNVVSWNALIAAYAQSGHS 222

Query: 190 FQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQEL-RLGMEIQCLGLKLGFHDHVYVL 248
              ++ +F  M  +G     +T V  VL A  +V  L ++   I   GL+    D V V 
Sbjct: 223 HHQALDLFEKMAEHGVRPCRATFV-GVLGACNDVTSLEKIHARIVETGLQFDVRD-VGVQ 280

Query: 249 TGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAER 308
             L++ Y+KCG +E A  +FR + R D +S N MI+ +   G  + S+++FR++      
Sbjct: 281 NALLNMYAKCGSLEVARDIFRKMQRRDQVSMNVMIATFAQQGLGKESIQVFREMDLEGLP 340

Query: 309 VNSSTIVGLIPVFYPFGHLHLTNCIHSFCL-----KSGIVSNSSVLTALSTVYSRLNEME 363
            + +T   +I      G L     IH   +     +   + N  V TAL ++Y +   +E
Sbjct: 341 QDDTTFASVITACSCCGALEFGKRIHKRVVEPVLGRKCCLPNVVVETALVSMYGKCGTLE 400

Query: 364 AARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACA 423
            A+ +F   + K+  SWNAM+A     G  +EA +  +      V  +  +  S+L AC+
Sbjct: 401 QAKAVFKAMTTKNSVSWNAMLAACAHQGQGDEAAAFLRAAACEGVELDSASFISVLIACS 460

Query: 424 QLGAISLGKWVHELVKSRNFESNIYVSTA-----LIDMYAKCGNIVEARELFDLMSHKSE 478
             G + +     +L+ S +F+    V  A     ++D+ A+ G + +A EL + M    +
Sbjct: 461 HSGMLEVAYDHFQLMLS-DFD---LVPAAENYRCMVDLLARSGRLGDADELMNSMPFSPD 516

Query: 479 -VTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGV---TFLSVLYACSHAGLVREGDE 534
            + W T++ G  + G  LE     +E   + + P      T LS LY+ +      + DE
Sbjct: 517 AIAWRTLLGGCRVQG-SLENAASAAEQAFN-LEPQNTAPYTLLSSLYSATG-----KKDE 569

Query: 535 I--FQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEP 579
           +   +S + + G + L    + ++++ GR        EF+ G +  P
Sbjct: 570 LVELRSSMKERGLRKLVPGRS-VIEVHGRVH------EFVAGDSSHP 609



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 77/303 (25%), Positives = 128/303 (42%), Gaps = 24/303 (7%)

Query: 9   RNLFLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATC----YARALF 64
           R  F+ +L      + L + HA+I+  G Q D+  V  + + L +  A C     AR +F
Sbjct: 242 RATFVGVLGACNDVTSLEKIHARIVETGLQFDVRDVG-VQNALLNMYAKCGSLEVARDIF 300

Query: 65  FSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDR 124
             + + D    NV+I  F+   + K SI  +  +     L  D+ T++ V++A S C   
Sbjct: 301 RKMQRRDQVSMNVMIATFAQQGLGKESIQVFREMDLE-GLPQDDTTFASVITACSCCGAL 359

Query: 125 SIGVLLHGHAIVSGYG-----SDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNS 179
             G  +H   +    G      ++ V  ALV +Y K   ++ A+ VF  M  K++V WN+
Sbjct: 360 EFGKRIHKRVVEPVLGRKCCLPNVVVETALVSMYGKCGTLEQAKAVFKAMTTKNSVSWNA 419

Query: 180 MISGLMKNCCFQ---DSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLG 236
           M++     C  Q   D    F       G  LDS S  +VL A +    L +  +     
Sbjct: 420 MLAA----CAHQGQGDEAAAFLRAAACEGVELDSASFISVLIACSHSGMLEVAYDH--FQ 473

Query: 237 LKLGFHDHVYVLTG---LVSFYSKCGEVERAELLFRDI-VRPDLISCNAMISGYTCNGKT 292
           L L   D V        +V   ++ G +  A+ L   +   PD I+   ++ G    G  
Sbjct: 474 LMLSDFDLVPAAENYRCMVDLLARSGRLGDADELMNSMPFSPDAIAWRTLLGGCRVQGSL 533

Query: 293 ESS 295
           E++
Sbjct: 534 ENA 536


>gi|115470597|ref|NP_001058897.1| Os07g0150000 [Oryza sativa Japonica Group]
 gi|34393394|dbj|BAC82905.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113610433|dbj|BAF20811.1| Os07g0150000 [Oryza sativa Japonica Group]
          Length = 592

 Score =  409 bits (1051), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 213/513 (41%), Positives = 309/513 (60%), Gaps = 6/513 (1%)

Query: 275 DLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIH 334
           D    N ++     + +   +L L R+ LA     ++ T   LI        L    C+H
Sbjct: 83  DPFPLNTVLRIAAGSPRPRVALELHRRRLALP---DTHTYPPLIQACARLLALREGECLH 139

Query: 335 SFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESS--EKSLASWNAMIAGYTQNGL 392
           +   K+G V+   V  +L  +Y      E+A K+FDE     ++L SWN+M+  +  NG 
Sbjct: 140 AEAAKNGFVTLVFVQNSLVHLYGACGLFESAHKVFDEMPVRGRNLVSWNSMLNSFAANGR 199

Query: 393 TEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTA 452
             E +++F EM     AP+  T+ S+L+ACA+ GA++LG+ VH  V+      N +VS A
Sbjct: 200 PNEVLTVFWEMLGVDFAPDGFTIVSVLTACAEFGALALGRRVHVYVEKVGLVENSHVSNA 259

Query: 453 LIDMYAKCGNIVEARELFDLMS-HKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRP 511
           LID+YAKCG++ +AR +F+ M   ++ V+W ++I G   +G G EAL+LFS M    + P
Sbjct: 260 LIDLYAKCGSVNDARRIFEEMGLGRTVVSWTSLIVGLAANGFGKEALELFSLMEREKLVP 319

Query: 512 SGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEF 571
           + +T + VLYACSH GLV +G   F  M  D+G  P  EH  CMVD+LGRAG++E+A ++
Sbjct: 320 TEITMVGVLYACSHCGLVDDGFRYFDRMKEDYGISPRIEHLGCMVDLLGRAGRVEEAYDY 379

Query: 572 IKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDY 631
           I  + +EP   VW  LLG+C +HK   L +VA E+L ELDP + G +VLLSN+Y+A   +
Sbjct: 380 IITMPLEPNAVVWRTLLGSCAMHKKLELGKVAWERLVELDPGHSGDYVLLSNLYAAVGMW 439

Query: 632 LQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREA 691
                +R+ + K ++ K PG +L+E+  + + F  GD+ HP+S  IY ML ++  ++R  
Sbjct: 440 ADVHVLRKTMVKDRVRKNPGHSLVELRNSVYEFVMGDRSHPESEQIYEMLAEIAERLRRE 499

Query: 692 GFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTAT 751
           G+   T   L D+EEEEKE  +  HSE+LAIAF L+ + PG  IRIIKNLR+C DCH A 
Sbjct: 500 GYIPRTSNVLADIEEEEKETALNYHSERLAIAFALLKSLPGIPIRIIKNLRMCGDCHVAF 559

Query: 752 KFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
             ISKV  R I+VRD +RFHHF+GG CSC DYW
Sbjct: 560 NLISKVYDREIIVRDRSRFHHFQGGACSCKDYW 592



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 80/288 (27%), Positives = 141/288 (48%), Gaps = 5/288 (1%)

Query: 209 DSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLF 268
           D+ +   ++ A A +  LR G  +     K GF   V+V   LV  Y  CG  E A  +F
Sbjct: 115 DTHTYPPLIQACARLLALREGECLHAEAAKNGFVTLVFVQNSLVHLYGACGLFESAHKVF 174

Query: 269 RDI-VR-PDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGH 326
            ++ VR  +L+S N+M++ +  NG+    L +F ++L      +  TIV ++     FG 
Sbjct: 175 DEMPVRGRNLVSWNSMLNSFAANGRPNEVLTVFWEMLGVDFAPDGFTIVSVLTACAEFGA 234

Query: 327 LHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESS-EKSLASWNAMIA 385
           L L   +H +  K G+V NS V  AL  +Y++   +  AR++F+E    +++ SW ++I 
Sbjct: 235 LALGRRVHVYVEKVGLVENSHVSNALIDLYAKCGSVNDARRIFEEMGLGRTVVSWTSLIV 294

Query: 386 GYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLG-KWVHELVKSRNFE 444
           G   NG  +EA+ LF  M+  K+ P  +T+  +L AC+  G +  G ++   + +     
Sbjct: 295 GLAANGFGKEALELFSLMEREKLVPTEITMVGVLYACSHCGLVDDGFRYFDRMKEDYGIS 354

Query: 445 SNIYVSTALIDMYAKCGNIVEARELFDLMS-HKSEVTWNTMISGYGLH 491
             I     ++D+  + G + EA +    M    + V W T++    +H
Sbjct: 355 PRIEHLGCMVDLLGRAGRVEEAYDYIITMPLEPNAVVWRTLLGSCAMH 402



 Score =  102 bits (254), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 105/396 (26%), Positives = 170/396 (42%), Gaps = 46/396 (11%)

Query: 71  DLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLL 130
           D F  N ++R  + +  P+ ++  +   R+  AL PD  TY  ++ A +       G  L
Sbjct: 83  DPFPLNTVLRIAAGSPRPRVALELH---RRRLAL-PDTHTYPPLIQACARLLALREGECL 138

Query: 131 HGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMP--EKDTVLWNSMISGLMKNC 188
           H  A  +G+ + +FV  +LV LY      +SA KVFD+MP   ++ V WNSM++    N 
Sbjct: 139 HAEAAKNGFVTLVFVQNSLVHLYGACGLFESAHKVFDEMPVRGRNLVSWNSMLNSFAANG 198

Query: 189 CFQDSIWVFGDMVRNGGTWL-DSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYV 247
              + + VF +M+  G  +  D  ++ +VL A AE   L LG  +     K+G  ++ +V
Sbjct: 199 RPNEVLTVFWEML--GVDFAPDGFTIVSVLTACAEFGALALGRRVHVYVEKVGLVENSHV 256

Query: 248 LTGLVSFYSKCGEVERAELLFRDI-VRPDLISCNAMISGYTCNGKTESSLRLFRQLLASA 306
              L+  Y+KCG V  A  +F ++ +   ++S  ++I G   NG  + +L LF  +    
Sbjct: 257 SNALIDLYAKCGSVNDARRIFEEMGLGRTVVSWTSLIVGLAANGFGKEALELFSLMEREK 316

Query: 307 ERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAAR 366
                 T+VG+           L  C H   +  G              + R+ E     
Sbjct: 317 LVPTEITMVGV-----------LYACSHCGLVDDGF-----------RYFDRMKE----- 349

Query: 367 KLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLG 426
              D      +     M+    + G  EEA      M    + PN V   ++L +CA   
Sbjct: 350 ---DYGISPRIEHLGCMVDLLGRAGRVEEAYDYIITM---PLEPNAVVWRTLLGSCAMHK 403

Query: 427 AISLGKWVHE-LVKSRNFESNIYVSTALIDMYAKCG 461
            + LGK   E LV+     S  YV   L ++YA  G
Sbjct: 404 KLELGKVAWERLVELDPGHSGDYV--LLSNLYAAVG 437


>gi|212274581|ref|NP_001130403.1| uncharacterized protein LOC100191499 [Zea mays]
 gi|194689034|gb|ACF78601.1| unknown [Zea mays]
 gi|413932819|gb|AFW67370.1| hypothetical protein ZEAMMB73_996266 [Zea mays]
          Length = 606

 Score =  409 bits (1051), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 210/528 (39%), Positives = 312/528 (59%), Gaps = 8/528 (1%)

Query: 264 AELLFRDIVRP-DLISCNAMISGYT-----CNGKTESSLRLFRQLLASAERVNSSTIVGL 317
           A  +F  + +P D +  N ++ GY       +  + +++R+F ++L      ++ T V L
Sbjct: 80  ARQVFDRVTQPSDAVWYNTLLRGYARSSSSSSSSSAAAVRVFVRMLEEGVAPDTYTFVSL 139

Query: 318 IPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSL 377
           +               H+  +K G   +  V   L  +Y+   +  AAR  F  +    +
Sbjct: 140 LKACAAARAGEHGRQAHAVAVKLGAAGHDYVRPTLINMYAECGDARAARVTFGRADGDCV 199

Query: 378 ASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHEL 437
            S+NAMIA   ++    EA+ LF+EMQA  + P PVTV S+LSACA LGA+ LG+W+H+ 
Sbjct: 200 VSYNAMIAAAVRSSRPGEALVLFREMQAKGLNPTPVTVISVLSACALLGALQLGRWLHDY 259

Query: 438 VKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEA 497
           V+     S + VSTAL+DMYAKCG++ +A  +F  M  +    W+ MI  Y  HG+G EA
Sbjct: 260 VRKLGLGSLVKVSTALVDMYAKCGSLEDAIAVFQGMESRDRQAWSVMIVAYANHGYGREA 319

Query: 498 LQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVD 557
           + LF EM   G++P  +TFL +LYACSH+GLV EG   F  M  DHG  P  +HY C+ D
Sbjct: 320 ISLFEEMKKQGMKPDDITFLGLLYACSHSGLVSEGLRYFDDM-KDHGIVPGIKHYGCVTD 378

Query: 558 ILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGY 617
           +L R+GQLE+A +FI  L + P P +W  LL AC  H D  L +   E++ ELD  + G 
Sbjct: 379 LLARSGQLERAYKFIDELPINPTPILWRTLLSACGGHGDVELGKRVFERILELDDSHGGD 438

Query: 618 HVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAI 677
           +V+ SN+ +    + +   VR+++  + + K PGC+ IE+  T H F +GD  HP+S   
Sbjct: 439 YVIFSNLCANTGYWEEMNRVRKLMSDKGVVKVPGCSSIEIDNTVHEFFAGDGRHPKSQEA 498

Query: 678 YAMLEKLNGKMREAGFQTETVTALH-DVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIR 736
             M++++  +++  G+  +T    H ++ EEEK + +K HSEKLAIAFGL+ T PG  +R
Sbjct: 499 RKMVDEVIDQLKLVGYIPDTSHVFHVEMGEEEKAISLKYHSEKLAIAFGLLNTAPGATLR 558

Query: 737 IIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           ++KNLRVC DCH+  KF+S V  R I++RD NRFHHF+ G+CSCGDYW
Sbjct: 559 VVKNLRVCPDCHSMAKFVSMVFNRRIILRDLNRFHHFERGICSCGDYW 606



 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 94/351 (26%), Positives = 167/351 (47%), Gaps = 8/351 (2%)

Query: 162 ARKVFDKMPEK-DTVLWNSMISGLMKNCCFQDS-----IWVFGDMVRNGGTWLDSTSVAA 215
           AR+VFD++ +  D V +N+++ G  ++     S     + VF  M+  G    D+ +  +
Sbjct: 80  ARQVFDRVTQPSDAVWYNTLLRGYARSSSSSSSSSAAAVRVFVRMLEEG-VAPDTYTFVS 138

Query: 216 VLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPD 275
           +L A A  +    G +   + +KLG   H YV   L++ Y++CG+   A + F       
Sbjct: 139 LLKACAAARAGEHGRQAHAVAVKLGAAGHDYVRPTLINMYAECGDARAARVTFGRADGDC 198

Query: 276 LISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHS 335
           ++S NAMI+    + +   +L LFR++ A        T++ ++      G L L   +H 
Sbjct: 199 VVSYNAMIAAAVRSSRPGEALVLFREMQAKGLNPTPVTVISVLSACALLGALQLGRWLHD 258

Query: 336 FCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEE 395
           +  K G+ S   V TAL  +Y++   +E A  +F     +   +W+ MI  Y  +G   E
Sbjct: 259 YVRKLGLGSLVKVSTALVDMYAKCGSLEDAIAVFQGMESRDRQAWSVMIVAYANHGYGRE 318

Query: 396 AISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALID 455
           AISLF+EM+   + P+ +T   +L AC+  G +S G    + +K       I     + D
Sbjct: 319 AISLFEEMKKQGMKPDDITFLGLLYACSHSGLVSEGLRYFDDMKDHGIVPGIKHYGCVTD 378

Query: 456 MYAKCGNIVEARELFD-LMSHKSEVTWNTMISGYGLHGHGLEALQLFSEML 505
           + A+ G +  A +  D L  + + + W T++S  G HG      ++F  +L
Sbjct: 379 LLARSGQLERAYKFIDELPINPTPILWRTLLSACGGHGDVELGKRVFERIL 429



 Score = 99.8 bits (247), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 112/473 (23%), Positives = 196/473 (41%), Gaps = 71/473 (15%)

Query: 59  YARALFFSIPKP-DLFLFNVIIRGFSNNEMPKSSI------CFYTHLRKNTALTPDNFTY 111
           YAR +F  + +P D   +N ++RG++ +    SS        F   L +  A  PD +T+
Sbjct: 79  YARQVFDRVTQPSDAVWYNTLLRGYARSSSSSSSSSAAAVRVFVRMLEEGVA--PDTYTF 136

Query: 112 SFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPE 171
             +L A +A      G   H  A+  G     +V   L+++Y +    ++AR  F +   
Sbjct: 137 VSLLKACAAARAGEHGRQAHAVAVKLGAAGHDYVRPTLINMYAECGDARAARVTFGRADG 196

Query: 172 KDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDST--SVAAVLPAVAEVQELRLG 229
              V +N+MI+  +++    +++ +F +M   G   L+ T  +V +VL A A +  L+LG
Sbjct: 197 DCVVSYNAMIAAAVRSSRPGEALVLFREMQAKG---LNPTPVTVISVLSACALLGALQLG 253

Query: 230 MEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCN 289
             +     KLG    V V T LV  Y+KCG +E A  +F+ +   D  + + MI  Y  +
Sbjct: 254 RWLHDYVRKLGLGSLVKVSTALVDMYAKCGSLEDAIAVFQGMESRDRQAWSVMIVAYANH 313

Query: 290 GKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVL 349
           G    ++ LF ++     + +  T +GL           L  C HS  +  G+       
Sbjct: 314 GYGREAISLFEEMKKQGMKPDDITFLGL-----------LYACSHSGLVSEGL------- 355

Query: 350 TALSTVYSRLNEMEAARKLFDESSEKSLAS----WNAMIAGYTQNGLTEEAISLFQEMQA 405
                            + FD+  +  +      +  +     ++G  E A     E+  
Sbjct: 356 -----------------RYFDDMKDHGIVPGIKHYGCVTDLLARSGQLERAYKFIDEL-- 396

Query: 406 SKVAPNPVTVSSILSACAQLGAISLGKWVHE-LVKSRNFESNIYVSTALIDMYAKCGNIV 464
             + P P+   ++LSAC   G + LGK V E +++  +     YV     ++ A  G   
Sbjct: 397 -PINPTPILWRTLLSACGGHGDVELGKRVFERILELDDSHGGDYV--IFSNLCANTGYWE 453

Query: 465 EARELFDLMSHKSEV------------TWNTMISGYGLHGHGLEALQLFSEML 505
           E   +  LMS K  V            T +   +G G H    EA ++  E++
Sbjct: 454 EMNRVRKLMSDKGVVKVPGCSSIEIDNTVHEFFAGDGRHPKSQEARKMVDEVI 506



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 71/300 (23%), Positives = 125/300 (41%), Gaps = 14/300 (4%)

Query: 12  FLSLLKG---AKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIP 68
           F+SLLK    A+      Q HA  +  G          L +  ++      AR  F    
Sbjct: 136 FVSLLKACAAARAGEHGRQAHAVAVKLGAAGHDYVRPTLINMYAECGDARAARVTFGRAD 195

Query: 69  KPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGV 128
              +  +N +I     +  P  ++  +  ++    L P   T   VLSA +      +G 
Sbjct: 196 GDCVVSYNAMIAAAVRSSRPGEALVLFREMQAK-GLNPTPVTVISVLSACALLGALQLGR 254

Query: 129 LLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNC 188
            LH +    G GS + V  ALVD+Y K   ++ A  VF  M  +D   W+ MI     + 
Sbjct: 255 WLHDYVRKLGLGSLVKVSTALVDMYAKCGSLEDAIAVFQGMESRDRQAWSVMIVAYANHG 314

Query: 189 CFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAE----VQELRLGMEIQCLGLKLGFHDH 244
             +++I +F +M +  G   D  +   +L A +      + LR   +++  G+  G   H
Sbjct: 315 YGREAISLFEEM-KKQGMKPDDITFLGLLYACSHSGLVSEGLRYFDDMKDHGIVPGI-KH 372

Query: 245 VYVLTGLVSFYSKCGEVERAELLFRDI-VRPDLISCNAMISGYTCNGKTESSLRLFRQLL 303
              +T L+   ++ G++ERA     ++ + P  I    ++S    +G  E   R+F ++L
Sbjct: 373 YGCVTDLL---ARSGQLERAYKFIDELPINPTPILWRTLLSACGGHGDVELGKRVFERIL 429


>gi|5262797|emb|CAB45902.1| putative protein (fragment) [Arabidopsis thaliana]
 gi|7268904|emb|CAB79107.1| putative protein (fragment) [Arabidopsis thaliana]
          Length = 1495

 Score =  409 bits (1050), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 207/509 (40%), Positives = 320/509 (62%), Gaps = 3/509 (0%)

Query: 264 AELLFRDIVRP-DLISCNAMISGYTCNGKTESSLRLFRQLLASA-ERVNSSTIVGLIPVF 321
           A  +F  I +P ++   N +I GY   G + S+  L+R++  S     ++ T   LI   
Sbjct: 72  AHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAV 131

Query: 322 YPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWN 381
                + L   IHS  ++SG  S   V  +L  +Y+   ++ +A K+FD+  EK L +WN
Sbjct: 132 TTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWN 191

Query: 382 AMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSR 441
           ++I G+ +NG  EEA++L+ EM +  + P+  T+ S+LSACA++GA++LGK VH  +   
Sbjct: 192 SVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKV 251

Query: 442 NFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLF 501
               N++ S  L+D+YA+CG + EA+ LFD M  K+ V+W ++I G  ++G G EA++LF
Sbjct: 252 GLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELF 311

Query: 502 SEMLHS-GIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILG 560
             M  + G+ P  +TF+ +LYACSH G+V+EG E F+ M  ++  +P  EH+ CMVD+L 
Sbjct: 312 KYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLA 371

Query: 561 RAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVL 620
           RAGQ++KA E+IK + ++P   +W  LLGAC +H D++LA  A  ++ +L+P + G +VL
Sbjct: 372 RAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVL 431

Query: 621 LSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAM 680
           LSN+Y++E+ +     +R+ + +  + K PG +L+EVG   H F  GD+ HPQS AIYA 
Sbjct: 432 LSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAK 491

Query: 681 LEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKN 740
           L+++ G++R  G+  +      DVEEEEKE  +  HSEK+AIAF LI+T   + I ++KN
Sbjct: 492 LKEMTGRLRSEGYVPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKN 551

Query: 741 LRVCLDCHTATKFISKVTGRVIVVRDANR 769
           LRVC DCH A K +SKV  R IVVRD +R
Sbjct: 552 LRVCADCHLAIKLVSKVYNREIVVRDRSR 580



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 114/403 (28%), Positives = 198/403 (49%), Gaps = 24/403 (5%)

Query: 162 ARKVFDKMPEKDTV-LWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAV 220
           A KVF K+ +   V +WN++I G  +      +  ++ +M  +G    D+ +   ++ AV
Sbjct: 72  AHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAV 131

Query: 221 AEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCN 280
             + ++RLG  I  + ++ GF   +YV   L+  Y+ CG+V  A  +F  +   DL++ N
Sbjct: 132 TTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWN 191

Query: 281 AMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKS 340
           ++I+G+  NGK E +L L+ ++ +   + +  TIV L+      G L L   +H + +K 
Sbjct: 192 SVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKV 251

Query: 341 GIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLF 400
           G+  N      L  +Y+R   +E A+ LFDE  +K+  SW ++I G   NG  +EAI LF
Sbjct: 252 GLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELF 311

Query: 401 QEMQASK-VAPNPVTVSSILSACAQLGAISLG-KWVHELVKSRNFESNIYVSTALIDMYA 458
           + M++++ + P  +T   IL AC+  G +  G ++   + +    E  I     ++D+ A
Sbjct: 312 KYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLA 371

Query: 459 KCGNIVEARELFDLMSHKSEVT-WNTMISGYGLHGHG-------LEALQLFSEMLHSGIR 510
           + G + +A E    M  +  V  W T++    +HG         ++ LQL  E  HSG  
Sbjct: 372 RAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQL--EPNHSG-- 427

Query: 511 PSGVTFLSVLYACSHAGLVREGD--EIFQSMIHDHGFKPLAEH 551
                 LS +YA       R  D  +I + M+ D G K +  H
Sbjct: 428 --DYVLLSNMYASEQ----RWSDVQKIRKQMLRD-GVKKVPGH 463



 Score =  153 bits (386), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 123/448 (27%), Positives = 213/448 (47%), Gaps = 43/448 (9%)

Query: 18  GAKTQSQLTQTHAQIIIHGFQ-NDLSTVTKLAHRLSDFKAT---CYARALFFSIPKP-DL 72
           G  + ++L Q HA  I HG   +D      L   L    +     YA  +F  I KP ++
Sbjct: 26  GVSSITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKIEKPINV 85

Query: 73  FLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHG 132
           F++N +IRG++      S+   Y  +R +  + PD  TY F++ A +   D  +G  +H 
Sbjct: 86  FIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHS 145

Query: 133 HAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQD 192
             I SG+GS ++V  +L+ LY     V SA KVFDKMPEKD V WNS+I+G  +N   ++
Sbjct: 146 VVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEE 205

Query: 193 SIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLV 252
           ++ ++ +M  + G   D  ++ ++L A A++  L LG  +    +K+G   +++    L+
Sbjct: 206 ALALYTEM-NSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLL 264

Query: 253 SFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSS 312
             Y++CG VE A+ LF ++V  + +S  ++I G   NG  + ++ LF+ + ++       
Sbjct: 265 DLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTE------ 318

Query: 313 TIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDES 372
              GL+P    F  + L  C H   +K G                     E  R++ +E 
Sbjct: 319 ---GLLPCEITFVGI-LYACSHCGMVKEG--------------------FEYFRRMREEY 354

Query: 373 S-EKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLG 431
             E  +  +  M+    + G  ++A    + M    + PN V   ++L AC   G   L 
Sbjct: 355 KIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMP---MQPNVVIWRTLLGACTVHGDSDLA 411

Query: 432 KWVH-ELVKSRNFESNIYVSTALIDMYA 458
           ++   ++++     S  YV   L +MYA
Sbjct: 412 EFARIQILQLEPNHSGDYV--LLSNMYA 437


>gi|296089786|emb|CBI39605.3| unnamed protein product [Vitis vinifera]
          Length = 624

 Score =  409 bits (1050), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 213/560 (38%), Positives = 324/560 (57%), Gaps = 14/560 (2%)

Query: 231 EIQCLGLKLGFHDHVYVLTGLVSFYSKCG-----EVERAELLFRDIVRPDLISCNAMISG 285
           +   L L+ G     Y+   LV  Y+          E +  +F  + +P++   N MI  
Sbjct: 73  QAHALILRTGHLQDSYIAGSLVKSYANVSTNRYLSFESSLRVFDFVRKPNVFLWNCMIKV 132

Query: 286 YTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSN 345
              N +   ++ L+ +++ +  R N  T   ++      G +     +H+  +K G+  +
Sbjct: 133 CIENNEPFKAILLYYEMMVAHFRPNKYTYPAVLKACSDAGVVAEGVQVHAHLVKHGLGGD 192

Query: 346 SSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQA 405
             +L++   +Y+    +  AR++ D+   +  A     +    + G   EA+ +F +MQ 
Sbjct: 193 GHILSSAIRMYASFGRLVEARRILDDKGGEVDA-----VCMPDRKGCFMEALEIFHQMQK 247

Query: 406 SKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVE 465
            K+ P    + S+LSACA LGA+  G+W+H   K  + + +  + T+L+DMYAKCG I  
Sbjct: 248 EKIRPRKFVLPSVLSACANLGALDQGRWIHTYAKRNSIQLDGVLGTSLVDMYAKCGRIDL 307

Query: 466 ARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSH 525
           A E+F+ MS+K   +WN MI G  +HG   +A+ LFS+M    I P+ +TF+ VL AC+H
Sbjct: 308 AWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFSKM---DINPNEITFVGVLNACAH 364

Query: 526 AGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWG 585
            GLV++G  IF SM  ++G +P  EHY C+VD+LGRAG L +A + +  +  EP PAVWG
Sbjct: 365 GGLVQKGLTIFNSMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAEKVVSSIPTEPTPAVWG 424

Query: 586 ALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRK 645
           ALLGAC  H +  L     + L EL+P+N G + LLSNIY+    + +   VR+++K+R 
Sbjct: 425 ALLGACRKHGNVELGERVGKILLELEPQNSGRYTLLSNIYAKAGRWEEVGEVRKLMKERG 484

Query: 646 LAKAPGCTLIEVG-GTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDV 704
           +   PG ++I++G G  H F  GD  HPQ   IY ML+K+  +++  G++ +    L D+
Sbjct: 485 IKTTPGTSIIDLGRGEVHKFIIGDGSHPQVKDIYQMLDKVKERLQMEGYEPDPSQVLFDI 544

Query: 705 EEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVV 764
           +EEEKE  +  HSEKLAI FGLI T PGT IRI+KNLRVC DCH+ATK IS+V  R I+V
Sbjct: 545 DEEEKETAVWQHSEKLAIGFGLINTSPGTTIRIVKNLRVCEDCHSATKLISQVYNREIIV 604

Query: 765 RDANRFHHFKGGVCSCGDYW 784
           RD  R+HHF+ G CSC D+W
Sbjct: 605 RDRIRYHHFRNGACSCKDFW 624



 Score =  107 bits (266), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 117/478 (24%), Positives = 196/478 (41%), Gaps = 55/478 (11%)

Query: 8   SRNLFLSLLKGAKTQS--QLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCY-----A 60
           S    L LL    T S   L Q HA I+  G   D      L    ++     Y     +
Sbjct: 52  SHKAILHLLNTQCTTSLHHLKQAHALILRTGHLQDSYIAGSLVKSYANVSTNRYLSFESS 111

Query: 61  RALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASA 120
             +F  + KP++FL+N +I+    N  P  +I  Y  +       P+ +TY  VL A S 
Sbjct: 112 LRVFDFVRKPNVFLWNCMIKVCIENNEPFKAILLYYEMMV-AHFRPNKYTYPAVLKACSD 170

Query: 121 CCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVF-DKMPEKDTVLWNS 179
               + GV +H H +  G G D  + ++ + +Y  F  +  AR++  DK  E D V    
Sbjct: 171 AGVVAEGVQVHAHLVKHGLGGDGHILSSAIRMYASFGRLVEARRILDDKGGEVDAVCMPD 230

Query: 180 MISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKL 239
                 +  CF +++ +F  M +          + +VL A A +  L  G  I     + 
Sbjct: 231 ------RKGCFMEALEIFHQMQKE-KIRPRKFVLPSVLSACANLGALDQGRWIHTYAKRN 283

Query: 240 GFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLF 299
                  + T LV  Y+KCG ++ A  +F  +   ++ S NAMI G   +G+ E ++ LF
Sbjct: 284 SIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLF 343

Query: 300 RQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRL 359
            ++  +    N  T VG+           L  C H   ++ G+           T+++ +
Sbjct: 344 SKMDINP---NEITFVGV-----------LNACAHGGLVQKGL-----------TIFNSM 378

Query: 360 NEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSIL 419
                 RK +    E  +  +  ++    + GL  EA  +   +      P P    ++L
Sbjct: 379 ------RKEY--GVEPQIEHYGCIVDLLGRAGLLTEAEKVVSSIPTE---PTPAVWGALL 427

Query: 420 SACAQLGAISLGKWVHE-LVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHK 476
            AC + G + LG+ V + L++     S  Y  T L ++YAK G   E  E+  LM  +
Sbjct: 428 GACRKHGNVELGERVGKILLELEPQNSGRY--TLLSNIYAKAGRWEEVGEVRKLMKER 483


>gi|242037817|ref|XP_002466303.1| hypothetical protein SORBIDRAFT_01g005310 [Sorghum bicolor]
 gi|241920157|gb|EER93301.1| hypothetical protein SORBIDRAFT_01g005310 [Sorghum bicolor]
          Length = 606

 Score =  409 bits (1050), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 212/528 (40%), Positives = 310/528 (58%), Gaps = 8/528 (1%)

Query: 264 AELLFRDIVRP-DLISCNAMISGYTCNGKTESS-----LRLFRQLLASAERVNSSTIVGL 317
           A  +F  +  P D +  N ++ GY  +    SS     +R+F ++L      ++ T V L
Sbjct: 80  ARQVFDRVPHPADAVWYNTLLRGYARSSNPSSSEAAAAVRVFVRMLEEGVAPDTYTFVSL 139

Query: 318 IPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSL 377
           +               H+  +K G   +  V   L  +Y+   +  AAR +F  +    +
Sbjct: 140 LKACAAARAGEEGRQAHALAVKLGAADHDYVRPTLINMYAECGDARAARVMFGGTDGGCV 199

Query: 378 ASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHEL 437
            S+NAMIA   ++    EA+ LF+EMQ   + P  VTV S+LSACA LGA+ LG+WVH+ 
Sbjct: 200 VSYNAMIAAAVRSSRPGEALVLFREMQGKGLKPTSVTVISVLSACALLGALELGRWVHDY 259

Query: 438 VKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEA 497
           V+     S + VSTALIDMYAKCG++ +A ++F  M  K    W+ MI  Y  HG+G EA
Sbjct: 260 VRKIGLGSLVKVSTALIDMYAKCGSLEDAIDVFQGMESKDRQAWSVMIVAYANHGYGREA 319

Query: 498 LQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVD 557
           + LF EM   G++P  +TFL VLYACSH+GLV EG + F  M  DHG  P  +HY C+ D
Sbjct: 320 ISLFEEMKKEGMKPDDITFLGVLYACSHSGLVSEGLQYFDDM-KDHGIVPGIKHYGCVTD 378

Query: 558 ILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGY 617
           +L R+GQLE+A +FI  L + P P +W  LL AC  H D  L +   E++ +LD  + G 
Sbjct: 379 LLARSGQLERAYKFIDELPINPTPILWRTLLSACGGHGDFELGKRVFERILKLDDSHGGD 438

Query: 618 HVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAI 677
           +V+ SN+ +    + +   VR+++ ++ + K PGC+ IE+  T H F +GD  HP+S   
Sbjct: 439 YVIFSNLCANTGYWEEMNMVRKLMSEKGVVKVPGCSSIEIDNTVHEFFAGDGRHPKSQEA 498

Query: 678 YAMLEKLNGKMREAGFQTETVTALH-DVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIR 736
             M++++  +++  G+   T    H ++ EEEK + +K HSEKLAIAFGL+ T PG  +R
Sbjct: 499 RKMVDEVIDQLKLVGYVPNTSHVFHVEMGEEEKAISLKYHSEKLAIAFGLLNTAPGATLR 558

Query: 737 IIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           ++KNLRVC DCH+  K +S V  R I++RD NRFHHF+ G+CSCGDYW
Sbjct: 559 VVKNLRVCPDCHSMAKLVSMVFNRRIILRDLNRFHHFEEGICSCGDYW 606



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 98/351 (27%), Positives = 170/351 (48%), Gaps = 8/351 (2%)

Query: 162 ARKVFDKMPEK-DTVLWNSMISGLMKNCCFQDS-----IWVFGDMVRNGGTWLDSTSVAA 215
           AR+VFD++P   D V +N+++ G  ++     S     + VF  M+  G    D+ +  +
Sbjct: 80  ARQVFDRVPHPADAVWYNTLLRGYARSSNPSSSEAAAAVRVFVRMLEEG-VAPDTYTFVS 138

Query: 216 VLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPD 275
           +L A A  +    G +   L +KLG  DH YV   L++ Y++CG+   A ++F       
Sbjct: 139 LLKACAAARAGEEGRQAHALAVKLGAADHDYVRPTLINMYAECGDARAARVMFGGTDGGC 198

Query: 276 LISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHS 335
           ++S NAMI+    + +   +L LFR++     +  S T++ ++      G L L   +H 
Sbjct: 199 VVSYNAMIAAAVRSSRPGEALVLFREMQGKGLKPTSVTVISVLSACALLGALELGRWVHD 258

Query: 336 FCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEE 395
           +  K G+ S   V TAL  +Y++   +E A  +F     K   +W+ MI  Y  +G   E
Sbjct: 259 YVRKIGLGSLVKVSTALIDMYAKCGSLEDAIDVFQGMESKDRQAWSVMIVAYANHGYGRE 318

Query: 396 AISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALID 455
           AISLF+EM+   + P+ +T   +L AC+  G +S G    + +K       I     + D
Sbjct: 319 AISLFEEMKKEGMKPDDITFLGVLYACSHSGLVSEGLQYFDDMKDHGIVPGIKHYGCVTD 378

Query: 456 MYAKCGNIVEARELFD-LMSHKSEVTWNTMISGYGLHGHGLEALQLFSEML 505
           + A+ G +  A +  D L  + + + W T++S  G HG      ++F  +L
Sbjct: 379 LLARSGQLERAYKFIDELPINPTPILWRTLLSACGGHGDFELGKRVFERIL 429



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 124/524 (23%), Positives = 214/524 (40%), Gaps = 63/524 (12%)

Query: 6   PQSRNLFLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKAT----CYAR 61
           P  ++  LS L    +   L Q HA  +  G     + VT+L    +   A      YAR
Sbjct: 22  PPQQHPVLSHLPHCTSLRTLAQLHAAAVKAGLAAHPALVTRLLTLCTGPDAGPAHLAYAR 81

Query: 62  ALFFSIPKP-DLFLFNVIIRGFSNNEMPKSSIC------FYTHLRKNTALTPDNFTYSFV 114
            +F  +P P D   +N ++RG++ +  P SS        F   L +  A  PD +T+  +
Sbjct: 82  QVFDRVPHPADAVWYNTLLRGYARSSNPSSSEAAAAVRVFVRMLEEGVA--PDTYTFVSL 139

Query: 115 LSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDT 174
           L A +A      G   H  A+  G     +V   L+++Y +    ++AR +F        
Sbjct: 140 LKACAAARAGEEGRQAHALAVKLGAADHDYVRPTLINMYAECGDARAARVMFGGTDGGCV 199

Query: 175 VLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQC 234
           V +N+MI+  +++    +++ +F +M +  G    S +V +VL A A +  L LG  +  
Sbjct: 200 VSYNAMIAAAVRSSRPGEALVLFREM-QGKGLKPTSVTVISVLSACALLGALELGRWVHD 258

Query: 235 LGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTES 294
              K+G    V V T L+  Y+KCG +E A  +F+ +   D  + + MI  Y  +G    
Sbjct: 259 YVRKIGLGSLVKVSTALIDMYAKCGSLEDAIDVFQGMESKDRQAWSVMIVAYANHGYGRE 318

Query: 295 SLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALST 354
           ++ LF ++     + +  T +G+           L  C HS  +  G+            
Sbjct: 319 AISLFEEMKKEGMKPDDITFLGV-----------LYACSHSGLVSEGL------------ 355

Query: 355 VYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVT 414
                ++M+      D      +  +  +     ++G  E A     E+    + P P+ 
Sbjct: 356 --QYFDDMK------DHGIVPGIKHYGCVTDLLARSGQLERAYKFIDEL---PINPTPIL 404

Query: 415 VSSILSACAQLGAISLGKWVHE-LVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLM 473
             ++LSAC   G   LGK V E ++K  +     YV     ++ A  G   E   +  LM
Sbjct: 405 WRTLLSACGGHGDFELGKRVFERILKLDDSHGGDYV--IFSNLCANTGYWEEMNMVRKLM 462

Query: 474 SHKSEV------------TWNTMISGYGLHGHGLEALQLFSEML 505
           S K  V            T +   +G G H    EA ++  E++
Sbjct: 463 SEKGVVKVPGCSSIEIDNTVHEFFAGDGRHPKSQEARKMVDEVI 506



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 92/413 (22%), Positives = 169/413 (40%), Gaps = 38/413 (9%)

Query: 12  FLSLLKG---AKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIP 68
           F+SLLK    A+   +  Q HA  +  G  +       L +  ++      AR +F    
Sbjct: 136 FVSLLKACAAARAGEEGRQAHALAVKLGAADHDYVRPTLINMYAECGDARAARVMFGGTD 195

Query: 69  KPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGV 128
              +  +N +I     +  P  ++  +  + +   L P + T   VLSA +      +G 
Sbjct: 196 GGCVVSYNAMIAAAVRSSRPGEALVLFREM-QGKGLKPTSVTVISVLSACALLGALELGR 254

Query: 129 LLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNC 188
            +H +    G GS + V  AL+D+Y K   ++ A  VF  M  KD   W+ MI     + 
Sbjct: 255 WVHDYVRKIGLGSLVKVSTALIDMYAKCGSLEDAIDVFQGMESKDRQAWSVMIVAYANHG 314

Query: 189 CFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGME----IQCLGLKLGFHDH 244
             +++I +F +M +  G   D  +   VL A +    +  G++    ++  G+  G   H
Sbjct: 315 YGREAISLFEEMKKE-GMKPDDITFLGVLYACSHSGLVSEGLQYFDDMKDHGIVPGI-KH 372

Query: 245 VYVLTGLVSFYSKCGEVERAELLFRDI-VRPDLISCNAMISGYTCNGKTESSLRLFRQLL 303
              +T L+   ++ G++ERA     ++ + P  I    ++S    +G  E   R+F ++L
Sbjct: 373 YGCVTDLL---ARSGQLERAYKFIDELPINPTPILWRTLLSACGGHGDFELGKRVFERIL 429

Query: 304 ASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGI--VSNSSVLTALSTVYS---- 357
              +      ++    +    G+    N +     + G+  V   S +   +TV+     
Sbjct: 430 KLDDSHGGDYVI-FSNLCANTGYWEEMNMVRKLMSEKGVVKVPGCSSIEIDNTVHEFFAG 488

Query: 358 --RLNEMEAARKLFDESSEKSLASWNAMIAGYTQN---------GLTEEAISL 399
             R  + + ARK+ DE  ++        + GY  N         G  E+AISL
Sbjct: 489 DGRHPKSQEARKMVDEVIDQ------LKLVGYVPNTSHVFHVEMGEEEKAISL 535


>gi|449461943|ref|XP_004148701.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
           chloroplastic-like [Cucumis sativus]
 gi|449517215|ref|XP_004165641.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
           chloroplastic-like [Cucumis sativus]
          Length = 706

 Score =  409 bits (1050), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 216/596 (36%), Positives = 347/596 (58%), Gaps = 2/596 (0%)

Query: 190 FQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLT 249
           ++D++ +F       G  +  ++  A++ A   ++ +R    +    +  GF    Y+  
Sbjct: 112 YRDALEMFEIFELEDGFHVGYSTYDALINACIGLKSIRGVKRLCNYMVDNGFEPDQYMRN 171

Query: 250 GLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERV 309
            ++  + KCG +  A  LF ++   + +S   +ISGY  +G    + RLF  +       
Sbjct: 172 RVLLMHVKCGMMIDACRLFDEMPARNAVSWGTIISGYVDSGNYVEAFRLFILMREEFYDC 231

Query: 310 NSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLF 369
              T   +I        +     +HS  +K+G+  +  V  AL  +YS+   +E A  +F
Sbjct: 232 GPRTFATMIRASAGLEIIFPGRQLHSCAIKAGLGQDIFVSCALIDMYSKCGSLEDAHCVF 291

Query: 370 DESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAIS 429
           DE  +K++  WN++IAGY  +G +EEA+ L+ EM+ S V  +  T S I+  C++L +++
Sbjct: 292 DEMPDKTIVGWNSIIAGYALHGYSEEALDLYHEMRDSGVKMDHFTFSIIIRICSRLASVA 351

Query: 430 LGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYG 489
             K VH  +    F  ++  +TAL+D Y+K G + +AR +FD MS ++ ++WN +I+GYG
Sbjct: 352 RAKQVHASLVRNGFGLDVVANTALVDFYSKWGKVDDARHVFDRMSCRNIISWNALIAGYG 411

Query: 490 LHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLA 549
            HGHG EA+ +F +ML  G+ P+ VTFL+VL ACS +GL   G EIFQSM  DH  KP A
Sbjct: 412 NHGHGEEAIDMFEKMLREGMMPNHVTFLAVLSACSISGLFERGWEIFQSMTRDHKVKPRA 471

Query: 550 EHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFE 609
            H+ACM+++LGR G L++A   I+    +P   +W ALL AC +H +  L + A+EKL+ 
Sbjct: 472 MHFACMIELLGREGLLDEAYALIRKAPFQPTANMWAALLRACRVHGNLELGKFAAEKLYG 531

Query: 610 LDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQ 669
           ++PE +  +++L NIY++     +AA V Q +K++ L   P C+ IEV   PH F SGD+
Sbjct: 532 MEPEKLSNYIVLLNIYNSSGKLKEAADVFQTLKRKGLRMLPACSWIEVNNQPHAFLSGDK 591

Query: 670 LHPQSTAIYAMLEKLNGKMREAGFQTETVT-ALHDVEEEEKELMMKVHSEKLAIAFGLIA 728
            H Q   +   +++L   + + G+  E     L DV+E E+++ M  HSEKLAIA+GL+ 
Sbjct: 592 HHVQIEKVVGKVDELMLNISKLGYVPEEQNFMLPDVDENEEKIRM-YHSEKLAIAYGLLN 650

Query: 729 TEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           T   T ++I+++ R+C DCH+  K I+ +T R IV+RDA+RFHHF+ G CSCGDYW
Sbjct: 651 TLEKTPLQIVQSHRICSDCHSVIKLIAMITKREIVIRDASRFHHFRDGSCSCGDYW 706



 Score =  149 bits (376), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 100/414 (24%), Positives = 212/414 (51%), Gaps = 8/414 (1%)

Query: 130 LHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCC 189
           L  + + +G+  D ++   ++ ++ K   +  A ++FD+MP ++ V W ++ISG + +  
Sbjct: 154 LCNYMVDNGFEPDQYMRNRVLLMHVKCGMMIDACRLFDEMPARNAVSWGTIISGYVDSGN 213

Query: 190 FQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLT 249
           + ++  +F  ++R         + A ++ A A ++ +  G ++    +K G    ++V  
Sbjct: 214 YVEAFRLF-ILMREEFYDCGPRTFATMIRASAGLEIIFPGRQLHSCAIKAGLGQDIFVSC 272

Query: 250 GLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERV 309
            L+  YSKCG +E A  +F ++    ++  N++I+GY  +G +E +L L+ ++  S  ++
Sbjct: 273 ALIDMYSKCGSLEDAHCVFDEMPDKTIVGWNSIIAGYALHGYSEEALDLYHEMRDSGVKM 332

Query: 310 NSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLF 369
           +  T   +I +      +     +H+  +++G   +    TAL   YS+  +++ AR +F
Sbjct: 333 DHFTFSIIIRICSRLASVARAKQVHASLVRNGFGLDVVANTALVDFYSKWGKVDDARHVF 392

Query: 370 DESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAIS 429
           D  S +++ SWNA+IAGY  +G  EEAI +F++M    + PN VT  ++LSAC+  G   
Sbjct: 393 DRMSCRNIISWNALIAGYGNHGHGEEAIDMFEKMLREGMMPNHVTFLAVLSACSISGLFE 452

Query: 430 LGKW--VHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVT-WNTMIS 486
            G W     + +    +        +I++  + G + EA  L      +     W  ++ 
Sbjct: 453 RG-WEIFQSMTRDHKVKPRAMHFACMIELLGREGLLDEAYALIRKAPFQPTANMWAALLR 511

Query: 487 GYGLHGHGLEALQLFSEMLHSGIRPSGVT-FLSVLYACSHAGLVREGDEIFQSM 539
              +HG+ LE  +  +E L+ G+ P  ++ ++ +L   + +G ++E  ++FQ++
Sbjct: 512 ACRVHGN-LELGKFAAEKLY-GMEPEKLSNYIVLLNIYNSSGKLKEAADVFQTL 563



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 91/353 (25%), Positives = 165/353 (46%), Gaps = 41/353 (11%)

Query: 127 GVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMK 186
           G  LH  AI +G G D+FV  AL+D+Y K   ++ A  VFD+MP+K  V WNS+I+G   
Sbjct: 252 GRQLHSCAIKAGLGQDIFVSCALIDMYSKCGSLEDAHCVFDEMPDKTIVGWNSIIAGYAL 311

Query: 187 NCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVY 246
           +   ++++ ++ +M R+ G  +D  + + ++   + +  +    ++    ++ GF   V 
Sbjct: 312 HGYSEEALDLYHEM-RDSGVKMDHFTFSIIIRICSRLASVARAKQVHASLVRNGFGLDVV 370

Query: 247 VLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASA 306
             T LV FYSK G+V+ A  +F  +   ++IS NA+I+GY  +G  E ++ +F ++L   
Sbjct: 371 ANTALVDFYSKWGKVDDARHVFDRMSCRNIISWNALIAGYGNHGHGEEAIDMFEKMLREG 430

Query: 307 ERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNS-SVLTALSTVYSRLNEMEAA 365
              N  T + ++                S C  SG+      +  +++            
Sbjct: 431 MMPNHVTFLAVL----------------SACSISGLFERGWEIFQSMTR----------- 463

Query: 366 RKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQL 425
               D   +     +  MI    + GL +EA +L ++   +   P     +++L AC   
Sbjct: 464 ----DHKVKPRAMHFACMIELLGREGLLDEAYALIRK---APFQPTANMWAALLRACRVH 516

Query: 426 GAISLGKWVHELVKSRNFE--SNIYVSTALIDMYAKCGNIVEARELFDLMSHK 476
           G + LGK+  E +     E  SN  V   L+++Y   G + EA ++F  +  K
Sbjct: 517 GNLELGKFAAEKLYGMEPEKLSNYIV---LLNIYNSSGKLKEAADVFQTLKRK 566



 Score = 76.3 bits (186), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 54/206 (26%), Positives = 98/206 (47%), Gaps = 2/206 (0%)

Query: 27  QTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNE 86
           Q H+  I  G   D+     L    S   +   A  +F  +P   +  +N II G++ + 
Sbjct: 254 QLHSCAIKAGLGQDIFVSCALIDMYSKCGSLEDAHCVFDEMPDKTIVGWNSIIAGYALHG 313

Query: 87  MPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVG 146
             + ++  Y  +R ++ +  D+FT+S ++   S     +    +H   + +G+G D+   
Sbjct: 314 YSEEALDLYHEMR-DSGVKMDHFTFSIIIRICSRLASVARAKQVHASLVRNGFGLDVVAN 372

Query: 147 AALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGT 206
            ALVD Y K+  V  AR VFD+M  ++ + WN++I+G   +   +++I +F  M+R  G 
Sbjct: 373 TALVDFYSKWGKVDDARHVFDRMSCRNIISWNALIAGYGNHGHGEEAIDMFEKMLRE-GM 431

Query: 207 WLDSTSVAAVLPAVAEVQELRLGMEI 232
             +  +  AVL A +       G EI
Sbjct: 432 MPNHVTFLAVLSACSISGLFERGWEI 457


>gi|115451769|ref|NP_001049485.1| Os03g0235200 [Oryza sativa Japonica Group]
 gi|108707037|gb|ABF94832.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|113547956|dbj|BAF11399.1| Os03g0235200 [Oryza sativa Japonica Group]
 gi|125585525|gb|EAZ26189.1| hypothetical protein OsJ_10058 [Oryza sativa Japonica Group]
 gi|215706461|dbj|BAG93317.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 641

 Score =  409 bits (1050), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 209/531 (39%), Positives = 318/531 (59%), Gaps = 13/531 (2%)

Query: 264 AELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYP 323
           A  LF  + + D  + +A++SGYT +G+ E++L L+R++    E   +            
Sbjct: 114 ARELFDRMPQRDHFAWSALVSGYTRHGQPEAALALYRRM---QEEPGNDGADNEFTASSA 170

Query: 324 FGHLHLTNC------IHSFCLKSGIVS---NSSVLTALSTVYSRLNEMEAARKLFDESSE 374
                   C      +H   ++ GI +   ++ + +AL+ +Y++   ++ AR++FD    
Sbjct: 171 LAAAAAARCGRAGRELHCHVVRRGIDAAGGDAVLWSALADMYAKCGRVDDARRVFDRMPV 230

Query: 375 KSLASWNAMIAGYTQNGLTEEAISLFQEMQASK-VAPNPVTVSSILSACAQLGAISLGKW 433
           +   SW AM+  Y   G   E   LF  M  ++ V PN  T + +L ACAQ    S G+ 
Sbjct: 231 RDAVSWTAMVERYFDGGRGGEGFRLFLHMLRTRGVRPNEFTYAGVLRACAQFAVESFGRQ 290

Query: 434 VHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGH 493
           VH  +       + +  +AL+ MY+KCG++  A  +F+ M+    V+W  +ISGY  +G 
Sbjct: 291 VHGRMAKSGTGDSCFAESALLRMYSKCGDMGSAVRVFEAMAKPDLVSWTAVISGYAQNGQ 350

Query: 494 GLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYA 553
             EAL+ F   L SGI+P  VTF+ VL AC+HAGLV +G EIF S+   +  +  A+HYA
Sbjct: 351 PEEALRYFDMFLRSGIKPDHVTFVGVLSACAHAGLVDKGLEIFHSIKEQYCIEHTADHYA 410

Query: 554 CMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPE 613
           C++D+L R+GQ E+A + I  +AV+P   +W +LLG C IHK+  LAR A+E LFE++PE
Sbjct: 411 CVIDLLSRSGQFERAEKMIGNMAVKPNKFLWASLLGGCRIHKNVGLARRAAEALFEIEPE 470

Query: 614 NVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQ 673
           N   +V L+NIY++   + +   VR++++ + + K P  + IEVG   HVF  GD+ HP+
Sbjct: 471 NPATYVTLANIYASVGLFDEVEDVRRIMESKGITKMPASSWIEVGRRVHVFLVGDKSHPK 530

Query: 674 STAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGT 733
           +  IYA+L+KL  KM E G+  +    LHDVE+E+KE  +  HSE+LA+AFG+IAT  G+
Sbjct: 531 ADEIYALLKKLYVKMVEEGYVADIEFVLHDVEDEQKEQDIGYHSERLAVAFGIIATPEGS 590

Query: 734 EIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
            I++ KNLR+C DCH A K IS++  R I+VRD+NRFHHFK G+CSC DYW
Sbjct: 591 PIKVFKNLRICGDCHAAIKLISQIVQRDIIVRDSNRFHHFKDGICSCRDYW 641



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 114/422 (27%), Positives = 188/422 (44%), Gaps = 48/422 (11%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALT-PDN-FTYSFVLSA 117
           AR LF  +P+ D F ++ ++ G++ +  P++++  Y  +++       DN FT S  L+A
Sbjct: 114 ARELFDRMPQRDHFAWSALVSGYTRHGQPEAALALYRRMQEEPGNDGADNEFTASSALAA 173

Query: 118 ASAC-CDRSIGVLLHGHAIVSGY---GSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKD 173
           A+A  C R+ G  LH H +  G    G D  + +AL D+Y K   V  AR+VFD+MP +D
Sbjct: 174 AAAARCGRA-GRELHCHVVRRGIDAAGGDAVLWSALADMYAKCGRVDDARRVFDRMPVRD 232

Query: 174 TVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQ 233
            V W +M+          +   +F  M+R  G   +  + A VL A A+      G ++ 
Sbjct: 233 AVSWTAMVERYFDGGRGGEGFRLFLHMLRTRGVRPNEFTYAGVLRACAQFAVESFGRQVH 292

Query: 234 CLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTE 293
               K G  D  +  + L+  YSKCG++  A  +F  + +PDL+S  A+ISGY  NG+ E
Sbjct: 293 GRMAKSGTGDSCFAESALLRMYSKCGDMGSAVRVFEAMAKPDLVSWTAVISGYAQNGQPE 352

Query: 294 SSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALS 353
            +LR F   L S  + +  T VG+           L+ C H+  +  G+           
Sbjct: 353 EALRYFDMFLRSGIKPDHVTFVGV-----------LSACAHAGLVDKGL----------- 390

Query: 354 TVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPV 413
            ++  + E            E +   +  +I   +++G  E A  +   M    V PN  
Sbjct: 391 EIFHSIKEQYCI--------EHTADHYACVIDLLSRSGQFERAEKMIGNM---AVKPNKF 439

Query: 414 TVSSILSACAQLGAISLGKWVHELVKSRNFE--------SNIYVSTALIDMYAKCGNIVE 465
             +S+L  C     + L +   E +     E        +NIY S  L D       I+E
Sbjct: 440 LWASLLGGCRIHKNVGLARRAAEALFEIEPENPATYVTLANIYASVGLFDEVEDVRRIME 499

Query: 466 AR 467
           ++
Sbjct: 500 SK 501



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 92/341 (26%), Positives = 162/341 (47%), Gaps = 8/341 (2%)

Query: 159 VKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRN-GGTWLDSTSVAAVL 217
           + SAR++FD+MP++D   W++++SG  ++   + ++ ++  M    G    D+   A+  
Sbjct: 111 LPSARELFDRMPQRDHFAWSALVSGYTRHGQPEAALALYRRMQEEPGNDGADNEFTASSA 170

Query: 218 PAVAEVQEL-RLGMEIQCLGLKLGFH---DHVYVLTGLVSFYSKCGEVERAELLFRDIVR 273
            A A      R G E+ C  ++ G         + + L   Y+KCG V+ A  +F  +  
Sbjct: 171 LAAAAAARCGRAGRELHCHVVRRGIDAAGGDAVLWSALADMYAKCGRVDDARRVFDRMPV 230

Query: 274 PDLISCNAMISGYTCNGKTESSLRLFRQLLAS-AERVNSSTIVGLIPVFYPFGHLHLTNC 332
            D +S  AM+  Y   G+     RLF  +L +   R N  T  G++     F        
Sbjct: 231 RDAVSWTAMVERYFDGGRGGEGFRLFLHMLRTRGVRPNEFTYAGVLRACAQFAVESFGRQ 290

Query: 333 IHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGL 392
           +H    KSG   +    +AL  +YS+  +M +A ++F+  ++  L SW A+I+GY QNG 
Sbjct: 291 VHGRMAKSGTGDSCFAESALLRMYSKCGDMGSAVRVFEAMAKPDLVSWTAVISGYAQNGQ 350

Query: 393 TEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLG-KWVHELVKSRNFESNIYVST 451
            EEA+  F     S + P+ VT   +LSACA  G +  G +  H + +    E       
Sbjct: 351 PEEALRYFDMFLRSGIKPDHVTFVGVLSACAHAGLVDKGLEIFHSIKEQYCIEHTADHYA 410

Query: 452 ALIDMYAKCGNIVEARELFDLMSHK-SEVTWNTMISGYGLH 491
            +ID+ ++ G    A ++   M+ K ++  W +++ G  +H
Sbjct: 411 CVIDLLSRSGQFERAEKMIGNMAVKPNKFLWASLLGGCRIH 451



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 78/255 (30%), Positives = 135/255 (52%), Gaps = 14/255 (5%)

Query: 342 IVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQ 401
           I S++++++ALS     L    +AR+LFD   ++   +W+A+++GYT++G  E A++L++
Sbjct: 94  ICSHNTLISALSRSPRHL---PSARELFDRMPQRDHFAWSALVSGYTRHGQPEAALALYR 150

Query: 402 EMQ---ASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFES---NIYVSTALID 455
            MQ    +  A N  T SS L+A A       G+ +H  V  R  ++   +  + +AL D
Sbjct: 151 RMQEEPGNDGADNEFTASSALAAAAAARCGRAGRELHCHVVRRGIDAAGGDAVLWSALAD 210

Query: 456 MYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHS-GIRPSGV 514
           MYAKCG + +AR +FD M  +  V+W  M+  Y   G G E  +LF  ML + G+RP+  
Sbjct: 211 MYAKCGRVDDARRVFDRMPVRDAVSWTAMVERYFDGGRGGEGFRLFLHMLRTRGVRPNEF 270

Query: 515 TFLSVLYACSHAGLVREGDEIFQSMIHD-HGFKPLAEHYACMVDILGRAGQLEKALEFIK 573
           T+  VL AC+   +   G ++   M     G    AE  + ++ +  + G +  A+   +
Sbjct: 271 TYAGVLRACAQFAVESFGRQVHGRMAKSGTGDSCFAE--SALLRMYSKCGDMGSAVRVFE 328

Query: 574 GLAVEPGPAVWGALL 588
            +A +P    W A++
Sbjct: 329 AMA-KPDLVSWTAVI 342


>gi|356518836|ref|XP_003528083.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Glycine max]
          Length = 568

 Score =  408 bits (1049), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 195/456 (42%), Positives = 284/456 (62%), Gaps = 2/456 (0%)

Query: 331 NCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQN 390
           +CIH+  LK G  SN  V  AL   Y     + A+ KLFDE   + L SW+++I+ + + 
Sbjct: 113 HCIHTLVLKLGFHSNIYVQNALINSYGTSGSLHASLKLFDEMPRRDLISWSSLISCFAKR 172

Query: 391 GLTEEAISLFQEMQ--ASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIY 448
           GL +EA++LFQ+MQ   S + P+ V + S++SA + LGA+ LG WVH  +        + 
Sbjct: 173 GLPDEALTLFQQMQLKESDILPDGVVMLSVISAVSSLGALELGIWVHAFISRIGVNLTVS 232

Query: 449 VSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSG 508
           + +ALIDMY++CG+I  + ++FD M H++ VTW  +I+G  +HG G EAL+ F +M+ SG
Sbjct: 233 LGSALIDMYSRCGDIDRSVKVFDEMPHRNVVTWTALINGLAVHGRGREALEAFYDMVESG 292

Query: 509 IRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKA 568
           ++P  + F+ VL ACSH GLV EG  +F SM  ++G +P  EHY CMVD+LGRAG + +A
Sbjct: 293 LKPDRIAFMGVLVACSHGGLVEEGRRVFSSMWSEYGIEPALEHYGCMVDLLGRAGMVLEA 352

Query: 569 LEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAE 628
            +F++G+ V P   +W  LLGAC+ H    LA  A E++ ELDP + G +VLLSN Y   
Sbjct: 353 FDFVEGMRVRPNSVIWRTLLGACVNHNLLVLAEKAKERIKELDPHHDGDYVLLSNAYGGV 412

Query: 629 RDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKM 688
            ++++   VR  +++ K+ K PG +L+ +    H F SGD  HPQ   I   L  +   +
Sbjct: 413 GNWVKKEGVRNSMRESKIVKEPGLSLVHIDQVAHEFVSGDNSHPQWEEITRFLGSVIDTV 472

Query: 689 REAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCH 748
           +  G+   T   LHD++EEEKE  +  HSEKLA+AF L+       IR+IKNLR+C DCH
Sbjct: 473 KLGGYTPSTKNVLHDIQEEEKEHSLGYHSEKLAVAFVLLYHRDRKTIRVIKNLRICYDCH 532

Query: 749 TATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           +  K +S    R IV+RD +RFHHF+ G CSC D+W
Sbjct: 533 SFMKHVSGFFDRDIVIRDRSRFHHFRKGSCSCRDFW 568



 Score =  115 bits (288), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 73/258 (28%), Positives = 131/258 (50%), Gaps = 4/258 (1%)

Query: 232 IQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGK 291
           I  L LKLGFH ++YV   L++ Y   G +  +  LF ++ R DLIS +++IS +   G 
Sbjct: 115 IHTLVLKLGFHSNIYVQNALINSYGTSGSLHASLKLFDEMPRRDLISWSSLISCFAKRGL 174

Query: 292 TESSLRLFRQLLASAERVNSSTIVGL--IPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVL 349
            + +L LF+Q+      +    +V L  I      G L L   +H+F  + G+    S+ 
Sbjct: 175 PDEALTLFQQMQLKESDILPDGVVMLSVISAVSSLGALELGIWVHAFISRIGVNLTVSLG 234

Query: 350 TALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVA 409
           +AL  +YSR  +++ + K+FDE   +++ +W A+I G   +G   EA+  F +M  S + 
Sbjct: 235 SALIDMYSRCGDIDRSVKVFDEMPHRNVVTWTALINGLAVHGRGREALEAFYDMVESGLK 294

Query: 410 PNPVTVSSILSACAQLGAISLGKWVHELVKSR-NFESNIYVSTALIDMYAKCGNIVEARE 468
           P+ +    +L AC+  G +  G+ V   + S    E  +     ++D+  + G ++EA +
Sbjct: 295 PDRIAFMGVLVACSHGGLVEEGRRVFSSMWSEYGIEPALEHYGCMVDLLGRAGMVLEAFD 354

Query: 469 LFDLMS-HKSEVTWNTMI 485
             + M    + V W T++
Sbjct: 355 FVEGMRVRPNSVIWRTLL 372



 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 100/461 (21%), Positives = 207/461 (44%), Gaps = 62/461 (13%)

Query: 10  NLFLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPK 69
           NL  +L+K A+  + L+               + + + A+  S      YA A+    P 
Sbjct: 14  NLHATLIKNAQHDNPLSLR-------------TFILRCANSSSPPDTARYAAAVLLRFPI 60

Query: 70  P-DLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAA--SACCDRSI 126
           P D F +N +IR  + +  P  ++  ++H+ + T +  D+FT+  +L ++  +  C    
Sbjct: 61  PGDPFPYNAVIRHVALHA-PSLALALFSHMHR-TNVPFDHFTFPLILKSSKLNPHC---- 114

Query: 127 GVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMK 186
              +H   +  G+ S+++V  AL++ Y     + ++ K+FD+MP +D + W+S+IS   K
Sbjct: 115 ---IHTLVLKLGFHSNIYVQNALINSYGTSGSLHASLKLFDEMPRRDLISWSSLISCFAK 171

Query: 187 NCCFQDSIWVFGDM-VRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHV 245
                +++ +F  M ++      D   + +V+ AV+ +  L LG+ +     ++G +  V
Sbjct: 172 RGLPDEALTLFQQMQLKESDILPDGVVMLSVISAVSSLGALELGIWVHAFISRIGVNLTV 231

Query: 246 YVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLAS 305
            + + L+  YS+CG+++R+  +F ++   ++++  A+I+G   +G+   +L  F  ++ S
Sbjct: 232 SLGSALIDMYSRCGDIDRSVKVFDEMPHRNVVTWTALINGLAVHGRGREALEAFYDMVES 291

Query: 306 AERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAA 365
             + +    +G+           L  C H   ++ G      V +++ + Y         
Sbjct: 292 GLKPDRIAFMGV-----------LVACSHGGLVEEG----RRVFSSMWSEY--------- 327

Query: 366 RKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQL 425
                   E +L  +  M+    + G+  EA    + M   +V PN V   ++L AC   
Sbjct: 328 ------GIEPALEHYGCMVDLLGRAGMVLEAFDFVEGM---RVRPNSVIWRTLLGACVNH 378

Query: 426 GAISLGKWVHELVKSRN-FESNIYVSTALIDMYAKCGNIVE 465
             + L +   E +K  +      YV   L + Y   GN V+
Sbjct: 379 NLLVLAEKAKERIKELDPHHDGDYV--LLSNAYGGVGNWVK 417


>gi|226505202|ref|NP_001141725.1| uncharacterized protein LOC100273856 [Zea mays]
 gi|194705708|gb|ACF86938.1| unknown [Zea mays]
 gi|413956425|gb|AFW89074.1| hypothetical protein ZEAMMB73_742653 [Zea mays]
          Length = 635

 Score =  408 bits (1049), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 212/525 (40%), Positives = 314/525 (59%), Gaps = 5/525 (0%)

Query: 264 AELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLL---ASAERVNSSTIVGLIPV 320
           A  LF  + R D  S +A++S +  +G+  ++L ++R++L     +   N  T    +  
Sbjct: 112 ARALFDRMPRRDHFSWSAIVSAHVRHGQPRAALAIYRRMLREPGGSGADNEFTASSALAA 171

Query: 321 FYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASW 380
                       +H   ++ GI +++ V +AL+ +Y++   ++ AR +FD    + + SW
Sbjct: 172 ATAARCARAGRELHCHVVRRGIDADAVVWSALADMYAKFGRLDDARSVFDRMPVRDVVSW 231

Query: 381 NAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVH-ELVK 439
            AM+  Y   G   E   LF  M  S + PN  T + +L ACA+  +  LGK VH  + K
Sbjct: 232 TAMLDRYFDAGRDGEGFRLFVRMMRSGILPNEFTYAGVLRACAEFTSEKLGKQVHGRMAK 291

Query: 440 SRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQ 499
           SR  +S  +  +AL+ MY+K G++  A  +F  M     V+W  MISGY  +G   EAL 
Sbjct: 292 SRTGDS-CFAGSALVHMYSKYGDMGTAMRVFRGMPKPDLVSWTAMISGYAQNGQPDEALH 350

Query: 500 LFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDIL 559
            F  +L SG RP  VTF+ VL AC+HAGLV +G  IF S+   +G +  A+HYAC++D+L
Sbjct: 351 CFDMLLSSGFRPDHVTFVGVLSACAHAGLVDKGLGIFHSIKDKYGIEHTADHYACVIDLL 410

Query: 560 GRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHV 619
            R+G  E+A + I  + V+P   +W +LLG C IHK+  LA  A+E LFE++PEN   +V
Sbjct: 411 SRSGLFERAEDMINTMPVKPNKFLWASLLGGCRIHKNVRLAWWAAEALFEIEPENPATYV 470

Query: 620 LLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYA 679
            L+NIY++   + +   +R+ ++ R + K P  + IEVG   HVF  GD+ HPQ+  IYA
Sbjct: 471 TLANIYASVGLFDEVENMRRTMELRGITKMPASSWIEVGTRVHVFLVGDKSHPQAEEIYA 530

Query: 680 MLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIK 739
           +L+KL  KMRE G+  +T   LHDVE+E+K+  +  HSE+LA+AFG+IAT  G+ I++ K
Sbjct: 531 LLKKLYVKMREEGYVADTGFVLHDVEDEQKQQDIGYHSERLAVAFGIIATPKGSPIKVFK 590

Query: 740 NLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           NLR+C DCHT  K ISK+  R I+VRD+NRFHHFK G CSC DYW
Sbjct: 591 NLRICGDCHTTIKLISKIVQREIIVRDSNRFHHFKNGSCSCRDYW 635



 Score =  139 bits (349), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 120/418 (28%), Positives = 185/418 (44%), Gaps = 44/418 (10%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTH-LRKNTALTPDN-FTYSFVLSA 117
           ARALF  +P+ D F ++ I+     +  P++++  Y   LR+      DN FT S  L+A
Sbjct: 112 ARALFDRMPRRDHFSWSAIVSAHVRHGQPRAALAIYRRMLREPGGSGADNEFTASSALAA 171

Query: 118 ASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLW 177
           A+A      G  LH H +  G  +D  V +AL D+Y KF  +  AR VFD+MP +D V W
Sbjct: 172 ATAARCARAGRELHCHVVRRGIDADAVVWSALADMYAKFGRLDDARSVFDRMPVRDVVSW 231

Query: 178 NSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGL 237
            +M+          +   +F  M+R+ G   +  + A VL A AE    +LG ++     
Sbjct: 232 TAMLDRYFDAGRDGEGFRLFVRMMRS-GILPNEFTYAGVLRACAEFTSEKLGKQVHGRMA 290

Query: 238 KLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLR 297
           K    D  +  + LV  YSK G++  A  +FR + +PDL+S  AMISGY  NG+ + +L 
Sbjct: 291 KSRTGDSCFAGSALVHMYSKYGDMGTAMRVFRGMPKPDLVSWTAMISGYAQNGQPDEALH 350

Query: 298 LFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYS 357
            F  LL+S  R +  T VG+           L+ C H+  +  G+     +  ++   Y 
Sbjct: 351 CFDMLLSSGFRPDHVTFVGV-----------LSACAHAGLVDKGL----GIFHSIKDKY- 394

Query: 358 RLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSS 417
                           E +   +  +I   +++GL E A  +   M    V PN    +S
Sbjct: 395 --------------GIEHTADHYACVIDLLSRSGLFERAEDMINTM---PVKPNKFLWAS 437

Query: 418 ILSACAQLGAISLGKWVHELVKSRNFE--------SNIYVSTALIDMYAKCGNIVEAR 467
           +L  C     + L  W  E +     E        +NIY S  L D        +E R
Sbjct: 438 LLGGCRIHKNVRLAWWAAEALFEIEPENPATYVTLANIYASVGLFDEVENMRRTMELR 495



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 90/335 (26%), Positives = 163/335 (48%), Gaps = 4/335 (1%)

Query: 161 SARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRN-GGTWLDST-SVAAVLP 218
           SAR +FD+MP +D   W++++S  +++   + ++ ++  M+R  GG+  D+  + ++ L 
Sbjct: 111 SARALFDRMPRRDHFSWSAIVSAHVRHGQPRAALAIYRRMLREPGGSGADNEFTASSALA 170

Query: 219 AVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLIS 278
           A    +  R G E+ C  ++ G      V + L   Y+K G ++ A  +F  +   D++S
Sbjct: 171 AATAARCARAGRELHCHVVRRGIDADAVVWSALADMYAKFGRLDDARSVFDRMPVRDVVS 230

Query: 279 CNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCL 338
             AM+  Y   G+     RLF +++ S    N  T  G++     F    L   +H    
Sbjct: 231 WTAMLDRYFDAGRDGEGFRLFVRMMRSGILPNEFTYAGVLRACAEFTSEKLGKQVHGRMA 290

Query: 339 KSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAIS 398
           KS    +    +AL  +YS+  +M  A ++F    +  L SW AMI+GY QNG  +EA+ 
Sbjct: 291 KSRTGDSCFAGSALVHMYSKYGDMGTAMRVFRGMPKPDLVSWTAMISGYAQNGQPDEALH 350

Query: 399 LFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSR-NFESNIYVSTALIDMY 457
            F  + +S   P+ VT   +LSACA  G +  G  +   +K +   E        +ID+ 
Sbjct: 351 CFDMLLSSGFRPDHVTFVGVLSACAHAGLVDKGLGIFHSIKDKYGIEHTADHYACVIDLL 410

Query: 458 AKCGNIVEARELFDLMSHK-SEVTWNTMISGYGLH 491
           ++ G    A ++ + M  K ++  W +++ G  +H
Sbjct: 411 SRSGLFERAEDMINTMPVKPNKFLWASLLGGCRIH 445



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 65/231 (28%), Positives = 112/231 (48%), Gaps = 7/231 (3%)

Query: 362 MEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEM---QASKVAPNPVTVSSI 418
           + +AR LFD    +   SW+A+++ + ++G    A+++++ M        A N  T SS 
Sbjct: 109 LASARALFDRMPRRDHFSWSAIVSAHVRHGQPRAALAIYRRMLREPGGSGADNEFTASSA 168

Query: 419 LSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSE 478
           L+A         G+ +H  V  R  +++  V +AL DMYAK G + +AR +FD M  +  
Sbjct: 169 LAAATAARCARAGRELHCHVVRRGIDADAVVWSALADMYAKFGRLDDARSVFDRMPVRDV 228

Query: 479 VTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQS 538
           V+W  M+  Y   G   E  +LF  M+ SGI P+  T+  VL AC+     + G ++   
Sbjct: 229 VSWTAMLDRYFDAGRDGEGFRLFVRMMRSGILPNEFTYAGVLRACAEFTSEKLGKQVHGR 288

Query: 539 MIHDH-GFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALL 588
           M     G    A   + +V +  + G +  A+   +G+  +P    W A++
Sbjct: 289 MAKSRTGDSCFAG--SALVHMYSKYGDMGTAMRVFRGMP-KPDLVSWTAMI 336



 Score = 86.3 bits (212), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 79/305 (25%), Positives = 135/305 (44%), Gaps = 13/305 (4%)

Query: 27  QTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVII-RGFSNN 85
           + H  ++  G   D    + LA   + F     AR++F  +P  D+  +  ++ R F   
Sbjct: 183 ELHCHVVRRGIDADAVVWSALADMYAKFGRLDDARSVFDRMPVRDVVSWTAMLDRYFDAG 242

Query: 86  EMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFV 145
              +    F   +R  + + P+ FTY+ VL A +      +G  +HG    S  G   F 
Sbjct: 243 RDGEGFRLFVRMMR--SGILPNEFTYAGVLRACAEFTSEKLGKQVHGRMAKSRTGDSCFA 300

Query: 146 GAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGG 205
           G+ALV +Y K+  + +A +VF  MP+ D V W +MISG  +N    +++  F DM+ + G
Sbjct: 301 GSALVHMYSKYGDMGTAMRVFRGMPKPDLVSWTAMISGYAQNGQPDEALHCF-DMLLSSG 359

Query: 206 TWLDSTSVAAVLPAVAEVQELRLGMEI-QCLGLKLGFHDHVYVLTGLVSFYSKCGEVERA 264
              D  +   VL A A    +  G+ I   +  K G          ++   S+ G  ERA
Sbjct: 360 FRPDHVTFVGVLSACAHAGLVDKGLGIFHSIKDKYGIEHTADHYACVIDLLSRSGLFERA 419

Query: 265 ELLFRDI-VRPDLISCNAMISGYTCNGKTESSLRL---FRQLLASAERVNSSTIVGLIPV 320
           E +   + V+P+     +++ G  C  +   ++RL     + L   E  N +T V L  +
Sbjct: 420 EDMINTMPVKPNKFLWASLLGG--C--RIHKNVRLAWWAAEALFEIEPENPATYVTLANI 475

Query: 321 FYPFG 325
           +   G
Sbjct: 476 YASVG 480


>gi|302791495|ref|XP_002977514.1| hypothetical protein SELMODRAFT_107304 [Selaginella moellendorffii]
 gi|300154884|gb|EFJ21518.1| hypothetical protein SELMODRAFT_107304 [Selaginella moellendorffii]
          Length = 673

 Score =  408 bits (1048), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 235/685 (34%), Positives = 381/685 (55%), Gaps = 27/685 (3%)

Query: 106 PDNFTYSFVLSAASAC---CDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSA 162
           P+   ++ +L A +      DRS    +    + +G+ +D+ V  AL+    +   ++ A
Sbjct: 8   PNAVIFTRLLEACARSPEKSDRSRLAEIQFRVVATGFDADVTVATALISALARCGDLEGA 67

Query: 163 RKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAE 222
           R+ FD++P K+ V WNSMI+ L ++  F  ++ ++  M   G    D + + A L + + 
Sbjct: 68  REAFDRIPAKNVVSWNSMIAALNEHGHFARALEIYRRMEPEGVKPSDISYIHA-LCSCSG 126

Query: 223 VQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAM 282
           +++L  G  I       GF   V+V   LV+ YSKC  ++ A   F  I   D++S N+M
Sbjct: 127 LRDLEQGKSIHDRVATDGFDTQVFVGNALVNMYSKCRRLDLAREAFERIDSKDVVSWNSM 186

Query: 283 ISGYTCNGKTESSLRLFRQLLASAERVNSS--TIVGLIPVFYPFGHLHLTNCIHSFCLKS 340
           I+ ++  G ++ +L  +R+++   ER+  +  T+V  +           T  +    ++ 
Sbjct: 187 IAAHSQLGGSDEALETYRRMIGE-ERLEPTKITLVHALGAALSLRSAGDTKLLQEDAIRL 245

Query: 341 GIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLF 400
           G+  +  V +AL +   +   ++ AR +FD    +++ SW+ +IA   ++G   +AI LF
Sbjct: 246 GLEGDLLVGSALVSALGKCGCLDQARAVFDRMERRNVVSWSGLIAALAEHGRGRDAIELF 305

Query: 401 QEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKC 460
             M    + PN VT+ S+L ACA  GAI+ G+  H  V    FE+   V+ AL++MY KC
Sbjct: 306 HRMDLDGIQPNEVTLLSVLEACASTGAIAEGRRTHARVSGCGFEAETNVANALVNMYGKC 365

Query: 461 GNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVL 520
           G++  AR +FD M+ ++ V+W  M++GY  HGH  EA ++F  M   GI+P+ +TF+SVL
Sbjct: 366 GHLGSARTVFDAMTWRNVVSWTAMLAGYAHHGHTEEARRVFKAMALEGIQPNVITFVSVL 425

Query: 521 YACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPG 580
           + CSHAG+V +G E F  M+ D G  P+ EHY C++D+LGRAG LE+A E ++ + VEP 
Sbjct: 426 FNCSHAGVVSDGLEQFHIMVGDFGIVPVTEHYGCVIDLLGRAGWLEEAEELLRTMPVEPD 485

Query: 581 PAVWGALLGACMIHKDTNLARVASEKLFELD-PENVGYHVLLSNIYSAERDYLQAATVRQ 639
            A W +LLGAC +H  T+ A+  ++   +L  P     +VLLSN+Y+ E           
Sbjct: 486 KAAWNSLLGACKVHSHTDRAKRIAKLACDLALPFASAPYVLLSNMYTDE----------- 534

Query: 640 VVKKRKLAKAPGC-TLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETV 698
             +++   +   C +LIEV G  H F +GD  HP+   I A L++L  +M          
Sbjct: 535 --EQQSDPEEDQCSSLIEVKGRVHEFVAGDWSHPRIEEIVAELQRLQEEM-----MILRG 587

Query: 699 TALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVT 758
           ++L +   +E  +    HS KLAIAFG++A+  G+ I ++   R+C++CH A K ISK+ 
Sbjct: 588 SSLCEEGGQEGSVQENEHSLKLAIAFGVLASLQGSSINVVNTRRICVECHDAAKVISKIA 647

Query: 759 GRVIVVRDANRFHHFKGGVCSCGDY 783
           GR IVVRD+ RFHH + GVCSCGDY
Sbjct: 648 GRKIVVRDSYRFHHIEQGVCSCGDY 672



 Score =  172 bits (436), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 119/477 (24%), Positives = 224/477 (46%), Gaps = 9/477 (1%)

Query: 22  QSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRG 81
           +S+L +   +++  GF  D++  T L   L+       AR  F  IP  ++  +N +I  
Sbjct: 29  RSRLAEIQFRVVATGFDADVTVATALISALARCGDLEGAREAFDRIPAKNVVSWNSMIAA 88

Query: 82  FSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGS 141
            + +     ++  Y  +     + P + +Y   L + S   D   G  +H      G+ +
Sbjct: 89  LNEHGHFARALEIYRRMEPE-GVKPSDISYIHALCSCSGLRDLEQGKSIHDRVATDGFDT 147

Query: 142 DLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMV 201
            +FVG ALV++Y K   +  AR+ F+++  KD V WNSMI+   +     +++  +  M+
Sbjct: 148 QVFVGNALVNMYSKCRRLDLAREAFERIDSKDVVSWNSMIAAHSQLGGSDEALETYRRMI 207

Query: 202 RNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCL---GLKLGFHDHVYVLTGLVSFYSKC 258
             G   L+ T +  V  A+     LR   + + L    ++LG    + V + LVS   KC
Sbjct: 208 --GEERLEPTKITLV-HALGAALSLRSAGDTKLLQEDAIRLGLEGDLLVGSALVSALGKC 264

Query: 259 GEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLI 318
           G +++A  +F  + R +++S + +I+    +G+   ++ LF ++     + N  T++ ++
Sbjct: 265 GCLDQARAVFDRMERRNVVSWSGLIAALAEHGRGRDAIELFHRMDLDGIQPNEVTLLSVL 324

Query: 319 PVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLA 378
                 G +      H+     G  + ++V  AL  +Y +   + +AR +FD  + +++ 
Sbjct: 325 EACASTGAIAEGRRTHARVSGCGFEAETNVANALVNMYGKCGHLGSARTVFDAMTWRNVV 384

Query: 379 SWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLG-KWVHEL 437
           SW AM+AGY  +G TEEA  +F+ M    + PN +T  S+L  C+  G +S G +  H +
Sbjct: 385 SWTAMLAGYAHHGHTEEARRVFKAMALEGIQPNVITFVSVLFNCSHAGVVSDGLEQFHIM 444

Query: 438 VKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMS-HKSEVTWNTMISGYGLHGH 493
           V              +ID+  + G + EA EL   M     +  WN+++    +H H
Sbjct: 445 VGDFGIVPVTEHYGCVIDLLGRAGWLEEAEELLRTMPVEPDKAAWNSLLGACKVHSH 501



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 93/384 (24%), Positives = 157/384 (40%), Gaps = 9/384 (2%)

Query: 18  GAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNV 77
           G +   Q    H ++   GF   +     L +  S  +    AR  F  I   D+  +N 
Sbjct: 126 GLRDLEQGKSIHDRVATDGFDTQVFVGNALVNMYSKCRRLDLAREAFERIDSKDVVSWNS 185

Query: 78  IIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVS 137
           +I   S       ++  Y  +     L P   T    L AA +        LL   AI  
Sbjct: 186 MIAAHSQLGGSDEALETYRRMIGEERLEPTKITLVHALGAALSLRSAGDTKLLQEDAIRL 245

Query: 138 GYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVF 197
           G   DL VG+ALV    K   +  AR VFD+M  ++ V W+ +I+ L ++   +D+I +F
Sbjct: 246 GLEGDLLVGSALVSALGKCGCLDQARAVFDRMERRNVVSWSGLIAALAEHGRGRDAIELF 305

Query: 198 GDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSK 257
             M  + G   +  ++ +VL A A    +  G          GF     V   LV+ Y K
Sbjct: 306 HRMDLD-GIQPNEVTLLSVLEACASTGAIAEGRRTHARVSGCGFEAETNVANALVNMYGK 364

Query: 258 CGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGL 317
           CG +  A  +F  +   +++S  AM++GY  +G TE + R+F+ +     + N   ++  
Sbjct: 365 CGHLGSARTVFDAMTWRNVVSWTAMLAGYAHHGHTEEARRVFKAMALEGIQPN---VITF 421

Query: 318 IPVFYPFGHLHLTN----CIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESS 373
           + V +   H  + +      H      GIV  +     +  +  R   +E A +L     
Sbjct: 422 VSVLFNCSHAGVVSDGLEQFHIMVGDFGIVPVTEHYGCVIDLLGRAGWLEEAEELLRTMP 481

Query: 374 -EKSLASWNAMIAGYTQNGLTEEA 396
            E   A+WN+++     +  T+ A
Sbjct: 482 VEPDKAAWNSLLGACKVHSHTDRA 505


>gi|297794613|ref|XP_002865191.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297311026|gb|EFH41450.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 697

 Score =  408 bits (1048), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 224/639 (35%), Positives = 360/639 (56%), Gaps = 16/639 (2%)

Query: 149 LVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMV-RNGGTW 207
           ++  Y + + +  A  +FD+MP +D V WNSMISG ++      ++ +F +M  R+  +W
Sbjct: 72  MISGYTRSNRLVDALNLFDEMPLRDVVSWNSMISGCVECGDIDTAVKMFDEMPERSVVSW 131

Query: 208 LDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELL 267
               +       V + + L   M ++           +     +V  Y + G+V+ A  L
Sbjct: 132 TAMVNGCFRFGMVDQAERLFCQMPVK----------DIAAWNAMVHGYLQFGKVDDALKL 181

Query: 268 FRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHL 327
           F+ + R ++IS   MI G   N ++  +L LF+ +L    +  S T   +I         
Sbjct: 182 FKQMPRKNVISWTTMICGLDQNERSGEALNLFKNMLRCCIKSTSRTFTCVITACANAPAF 241

Query: 328 HLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGY 387
           H+   +H F +KSG +    V  +L T+Y+     E +RK+F E   + +A W A+++GY
Sbjct: 242 HMGTQVHGFIIKSGFLYEEYVTASLITLYANCKRTEDSRKVFGEMVHEKVAVWTALLSGY 301

Query: 388 TQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNI 447
           + N   E+A+++F EM  + + PN  T +S L++C+ LG +  GK +H +       +  
Sbjct: 302 SLNRKHEDALNVFSEMIRNSILPNQSTFASGLNSCSALGTLDWGKEIHGVAVKLGLGTVA 361

Query: 448 YVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHS 507
           +V  +L+ MY+  GN+ +A  +F  +  KS V+WN++I G   HG G  A  +F +M+  
Sbjct: 362 FVGNSLVVMYSDSGNVNDAVSVFIEIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRL 421

Query: 508 GIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIH--DHGFKPLAEHYACMVDILGRAGQL 565
              P  +TF  +L ACSH G +++G ++F  +    +H  + + +HY CMVDILGR G+L
Sbjct: 422 NKEPDEITFTGLLSACSHCGFLQKGRKLFYYISSGLNHIDRKI-QHYTCMVDILGRCGEL 480

Query: 566 EKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIY 625
           ++A + I+ + V+P   VW ALL AC +H D +    A+  +F LD ++   +VLLSNIY
Sbjct: 481 KEAEKLIESMVVKPNEMVWLALLSACRMHSDVDRGEKAAAAIFNLDSKSSAAYVLLSNIY 540

Query: 626 SAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLN 685
           ++   +   + +R  +K++ + K PG + + + G  H F SGD+  P    I+  LE L 
Sbjct: 541 ASAGRWSSVSKLRVKMKQKGIMKKPGSSWVVIRGKKHEFFSGDR--PHCLRIFEKLEFLR 598

Query: 686 GKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCL 745
            K++E G+  +  +ALHDVE+E+KE M+  HSE+LAIAFGLI T  G+ + ++KNLRVC 
Sbjct: 599 EKLKELGYVPDYRSALHDVEDEQKEEMLWYHSERLAIAFGLINTVEGSTVTVMKNLRVCE 658

Query: 746 DCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           DCHT  K IS+V G  IV+RD  RFHHFK G+CSCGDYW
Sbjct: 659 DCHTVIKLISRVVGCKIVLRDPTRFHHFKNGMCSCGDYW 697



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 114/469 (24%), Positives = 212/469 (45%), Gaps = 50/469 (10%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           AR +F  +P P + L+  +I G++ +     ++  +  +        D  +++ ++S   
Sbjct: 54  AREVFDQVPSPHVSLYTKMISGYTRSNRLVDALNLFDEMP-----LRDVVSWNSMISGCV 108

Query: 120 ACCDRSIGVLLHG----HAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTV 175
            C D    V +       ++VS          A+V+  F+F  V  A ++F +MP KD  
Sbjct: 109 ECGDIDTAVKMFDEMPERSVVSW--------TAMVNGCFRFGMVDQAERLFCQMPVKDIA 160

Query: 176 LWNSMISGLMKNCCFQDSIWVFGDMVR-NGGTW------LD------------------- 209
            WN+M+ G ++     D++ +F  M R N  +W      LD                   
Sbjct: 161 AWNAMVHGYLQFGKVDDALKLFKQMPRKNVISWTTMICGLDQNERSGEALNLFKNMLRCC 220

Query: 210 ----STSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAE 265
               S +   V+ A A      +G ++    +K GF    YV   L++ Y+ C   E + 
Sbjct: 221 IKSTSRTFTCVITACANAPAFHMGTQVHGFIIKSGFLYEEYVTASLITLYANCKRTEDSR 280

Query: 266 LLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFG 325
            +F ++V   +    A++SGY+ N K E +L +F +++ ++   N ST    +      G
Sbjct: 281 KVFGEMVHEKVAVWTALLSGYSLNRKHEDALNVFSEMIRNSILPNQSTFASGLNSCSALG 340

Query: 326 HLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIA 385
            L     IH   +K G+ + + V  +L  +YS    +  A  +F E  +KS+ SWN++I 
Sbjct: 341 TLDWGKEIHGVAVKLGLGTVAFVGNSLVVMYSDSGNVNDAVSVFIEIFKKSIVSWNSIIV 400

Query: 386 GYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKS--RNF 443
           G  Q+G  + A  +F +M      P+ +T + +LSAC+  G +  G+ +   + S   + 
Sbjct: 401 GCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLQKGRKLFYYISSGLNHI 460

Query: 444 ESNIYVSTALIDMYAKCGNIVEARELFDLMSHK-SEVTWNTMISGYGLH 491
           +  I   T ++D+  +CG + EA +L + M  K +E+ W  ++S   +H
Sbjct: 461 DRKIQHYTCMVDILGRCGELKEAEKLIESMVVKPNEMVWLALLSACRMH 509



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 101/390 (25%), Positives = 173/390 (44%), Gaps = 31/390 (7%)

Query: 260 EVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQL-LASAERVNS------- 311
            ++ A  +F  +  P +     MISGYT + +   +L LF ++ L      NS       
Sbjct: 50  RLDEAREVFDQVPSPHVSLYTKMISGYTRSNRLVDALNLFDEMPLRDVVSWNSMISGCVE 109

Query: 312 ----STIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVL------------TALSTV 355
                T V +         +  T  ++  C + G+V  +  L             A+   
Sbjct: 110 CGDIDTAVKMFDEMPERSVVSWTAMVNG-CFRFGMVDQAERLFCQMPVKDIAAWNAMVHG 168

Query: 356 YSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTV 415
           Y +  +++ A KLF +   K++ SW  MI G  QN  + EA++LF+ M    +     T 
Sbjct: 169 YLQFGKVDDALKLFKQMPRKNVISWTTMICGLDQNERSGEALNLFKNMLRCCIKSTSRTF 228

Query: 416 SSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSH 475
           + +++ACA   A  +G  VH  +    F    YV+ +LI +YA C    ++R++F  M H
Sbjct: 229 TCVITACANAPAFHMGTQVHGFIIKSGFLYEEYVTASLITLYANCKRTEDSRKVFGEMVH 288

Query: 476 KSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEI 535
           +    W  ++SGY L+    +AL +FSEM+ + I P+  TF S L +CS  G +  G EI
Sbjct: 289 EKVAVWTALLSGYSLNRKHEDALNVFSEMIRNSILPNQSTFASGLNSCSALGTLDWGKEI 348

Query: 536 FQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALE-FIKGLAVEPGPAVWGALLGACMIH 594
               +   G   +A     +V +   +G +  A+  FI+    +     W +++  C  H
Sbjct: 349 HGVAV-KLGLGTVAFVGNSLVVMYSDSGNVNDAVSVFIE--IFKKSIVSWNSIIVGCAQH 405

Query: 595 KDTNLARVASEKLFEL--DPENVGYHVLLS 622
                A V   ++  L  +P+ + +  LLS
Sbjct: 406 GRGKWAFVIFGQMIRLNKEPDEITFTGLLS 435



 Score =  106 bits (264), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 91/393 (23%), Positives = 176/393 (44%), Gaps = 34/393 (8%)

Query: 40  DLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLR 99
           D++    + H    F     A  LF  +P+ ++  +  +I G   NE    ++  + ++ 
Sbjct: 158 DIAAWNAMVHGYLQFGKVDDALKLFKQMPRKNVISWTTMICGLDQNERSGEALNLFKNML 217

Query: 100 KNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWV 159
           +   +   + T++ V++A +      +G  +HG  I SG+  + +V A+L+ LY      
Sbjct: 218 R-CCIKSTSRTFTCVITACANAPAFHMGTQVHGFIIKSGFLYEEYVTASLITLYANCKRT 276

Query: 160 KSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPA 219
           + +RKVF +M  +   +W +++SG   N   +D++ VF +M+RN     + ++ A+ L +
Sbjct: 277 EDSRKVFGEMVHEKVAVWTALLSGYSLNRKHEDALNVFSEMIRN-SILPNQSTFASGLNS 335

Query: 220 VAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISC 279
            + +  L  G EI  + +KLG     +V   LV  YS  G V  A  +F +I +  ++S 
Sbjct: 336 CSALGTLDWGKEIHGVAVKLGLGTVAFVGNSLVVMYSDSGNVNDAVSVFIEIFKKSIVSW 395

Query: 280 NAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLK 339
           N++I G   +G+ + +  +F Q++   +  +  T  GL           L+ C H   L+
Sbjct: 396 NSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGL-----------LSACSHCGFLQ 444

Query: 340 SGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISL 399
            G             + S LN +           ++ +  +  M+    + G  +EA  L
Sbjct: 445 KG-------RKLFYYISSGLNHI-----------DRKIQHYTCMVDILGRCGELKEAEKL 486

Query: 400 FQEMQASKVAPNPVTVSSILSACAQLGAISLGK 432
            + M    V PN +   ++LSAC     +  G+
Sbjct: 487 IESMV---VKPNEMVWLALLSACRMHSDVDRGE 516



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 75/306 (24%), Positives = 140/306 (45%), Gaps = 22/306 (7%)

Query: 26  TQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNN 85
           TQ H  II  GF  +      L    ++ K T  +R +F  +    + ++  ++ G+S N
Sbjct: 245 TQVHGFIIKSGFLYEEYVTASLITLYANCKRTEDSRKVFGEMVHEKVAVWTALLSGYSLN 304

Query: 86  EMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFV 145
              + ++  ++ + +N+ L P+  T++  L++ SA      G  +HG A+  G G+  FV
Sbjct: 305 RKHEDALNVFSEMIRNSIL-PNQSTFASGLNSCSALGTLDWGKEIHGVAVKLGLGTVAFV 363

Query: 146 GAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGG 205
           G +LV +Y     V  A  VF ++ +K  V WNS+I G  ++   + +  +FG M+R   
Sbjct: 364 GNSLVVMYSDSGNVNDAVSVFIEIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNK 423

Query: 206 TWLDSTSVAAVLPAVAEVQELRLGMEI-QCLGLKLGFHDH-VYVLTGLVSFYSKCGEVER 263
              D  +   +L A +    L+ G ++   +   L   D  +   T +V    +CGE++ 
Sbjct: 424 E-PDEITFTGLLSACSHCGFLQKGRKLFYYISSGLNHIDRKIQHYTCMVDILGRCGELKE 482

Query: 264 AELLFRD-IVRPDLISCNAMISG-----------------YTCNGKTESSLRLFRQLLAS 305
           AE L    +V+P+ +   A++S                  +  + K+ ++  L   + AS
Sbjct: 483 AEKLIESMVVKPNEMVWLALLSACRMHSDVDRGEKAAAAIFNLDSKSSAAYVLLSNIYAS 542

Query: 306 AERVNS 311
           A R +S
Sbjct: 543 AGRWSS 548


>gi|225423551|ref|XP_002274884.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03380,
           mitochondrial [Vitis vinifera]
 gi|147818711|emb|CAN65040.1| hypothetical protein VITISV_009460 [Vitis vinifera]
          Length = 700

 Score =  408 bits (1048), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 231/652 (35%), Positives = 371/652 (56%), Gaps = 6/652 (0%)

Query: 8   SRNLFLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSI 67
           S N   SLL   KT S L + HA +++HG   DL   TKL      F     AR +F  I
Sbjct: 38  SSNPCFSLLGICKTVSSLRKIHALLVVHGLSEDLLCETKLVSLYGSFGHVECARLMFDRI 97

Query: 68  PKPDLFLFNVIIRGFSNNEMPKSSICFY-THLRKNTALTPDNFTYSFVLSAASACCDRSI 126
             PDL+ + V+IR +  N+     + FY T LRK      DN  +S VL A S   +   
Sbjct: 98  RNPDLYSWKVMIRWYFLNDSYSEIVQFYNTRLRKCLN-EYDNVVFSIVLKACSELRETDE 156

Query: 127 GVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMK 186
           G  LH   +  G   D FV   LVD+Y K   V+ +R+VFD++ +++ V W SMI G ++
Sbjct: 157 GRKLHCQIVKVG-SPDSFVLTGLVDMYAKCREVEDSRRVFDEILDRNVVCWTSMIVGYVQ 215

Query: 187 NCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVY 246
           N C ++ + +F  M R G    +  ++ +++ A  ++  L  G  +    +K GF  + +
Sbjct: 216 NDCLKEGLVLFNRM-REGLVEGNQYTLGSLVTACTKLGALHQGKWVHGYVIKSGFDLNSF 274

Query: 247 VLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASA 306
           ++T L+  Y KCG++  A  +F ++   DL+S  AMI GY   G    +L+LF       
Sbjct: 275 LVTPLLDLYFKCGDIRDAFSVFDELSTIDLVSWTAMIVGYAQRGYPREALKLFTDERWKD 334

Query: 307 ERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAAR 366
              N+ T   ++      G L++   +H   +K G   +++   AL  +Y++ + +  AR
Sbjct: 335 LLPNTVTTSSVLSACAQTGSLNMGRSVHCLGIKLG-SEDATFENALVDMYAKCHMIGDAR 393

Query: 367 KLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLG 426
            +F+   +K + +WN++I+GYTQNG   EA+ LF +M++  V P+ +T+ S+LSACA +G
Sbjct: 394 YVFETVFDKDVIAWNSIISGYTQNGYAYEALELFDQMRSDSVYPDAITLVSVLSACASVG 453

Query: 427 AISLGKWVHEL-VKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMI 485
           A  +G  +H   +K+     ++YV TAL++ YAKCG+   AR +FD M  K+ +TW+ MI
Sbjct: 454 AYRVGSSLHGYAIKAGLLSGSVYVGTALLNFYAKCGDAESARVIFDEMGEKNTITWSAMI 513

Query: 486 SGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGF 545
            GYG+ G    +L+LF +ML   + P+ V F ++L ACSH+G++ EG   F +M   + F
Sbjct: 514 GGYGIQGDCSRSLELFGDMLKEKLEPNEVIFTTILSACSHSGMLGEGWRYFNTMCQVYNF 573

Query: 546 KPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASE 605
            P  +HYACMVD+L RAG+LE+AL+FI+ + ++P  ++ GA L  C +H   +L  VA  
Sbjct: 574 VPSMKHYACMVDLLARAGRLEEALDFIEKIPIQPDVSLLGAFLHGCRLHSRFDLGEVAVR 633

Query: 606 KLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEV 657
           ++ EL P+   Y+VL+SN+Y++E  + QA  V +++K+R LAK PG +L+++
Sbjct: 634 RMLELHPDKACYYVLMSNLYASEGRWSQANQVMELMKQRGLAKLPGWSLVDI 685


>gi|414865824|tpg|DAA44381.1| TPA: hypothetical protein ZEAMMB73_039747 [Zea mays]
          Length = 645

 Score =  408 bits (1048), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 216/579 (37%), Positives = 341/579 (58%), Gaps = 3/579 (0%)

Query: 209 DSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLF 268
           + ++ A +L +    + +R G ++    L  G      + T LV  Y+ CG V  A  +F
Sbjct: 67  NHSNYATILRSCVLSRAVRPGRQLHARLLVSGTGLDAVLATRLVDLYASCGHVSLARRVF 126

Query: 269 RDIV-RPDLISCNAMISGYTCNGKTESSLRLFRQLLA-SAERVNSSTIVGLIPVFYPFGH 326
            ++  + ++   N +I  Y  +G  E+++ L+R +LA  + + ++ T   ++        
Sbjct: 127 DEMPNQGNVFLWNVLIRAYARDGPCEAAIELYRAMLAYGSMKPDNFTYPPVLKACAALLD 186

Query: 327 LHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAG 386
           L     +H   +++   ++  V T L  +Y++   M+ A  +F++++ +  A WN+MIA 
Sbjct: 187 LSAGREVHDRVMRTNWATDVFVCTGLIDMYAKCGCMDEAWAVFNDTTIRDAAVWNSMIAA 246

Query: 387 YTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESN 446
             QNG   EA++L + M A  +AP   T+ S +SA A   A+  G+ +H     R F S 
Sbjct: 247 CGQNGRPAEALTLCRNMAAEGIAPTIATLVSAISAAAVASALPRGRELHGYGWRRGFGSQ 306

Query: 447 IYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEML- 505
             + T+L+DMYAK G ++ A  LF+ + H+  ++WN MI G+G+HGH   A +LFS M  
Sbjct: 307 DKLKTSLLDMYAKSGWVMVAHVLFEQLLHRELISWNAMICGFGMHGHADHAFELFSRMRS 366

Query: 506 HSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQL 565
            + + P  +TF+ VL AC+H G+V+E  E+F  M+  +  KP  +HY C+VD+LG +G+ 
Sbjct: 367 EAQVMPDHITFVGVLSACNHGGMVQEAKEVFDLMVTVYSIKPTVQHYTCLVDVLGHSGRF 426

Query: 566 EKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIY 625
           ++A + IKG+ V+P   +WGALL  C IHK+  LA +A +KL EL+PE+ G +VLLSNIY
Sbjct: 427 KEASDVIKGMLVKPDSGIWGALLNGCKIHKNVELAELALQKLIELEPEDAGNYVLLSNIY 486

Query: 626 SAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLN 685
           +    + +AA VR+++  R L K   C+ IE+ G  H F  GD  HP+S  IY  LE+L 
Sbjct: 487 AESGKWEEAARVRKLMTNRGLKKIIACSWIELKGKFHGFLVGDASHPRSDDIYEELERLE 546

Query: 686 GKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCL 745
           G + + G+  +T    H+VE++EK  M+  HSE+LAIAFGLI+T P T++ + KNLRVC 
Sbjct: 547 GLISQTGYVPDTTPVFHNVEDDEKRNMVWGHSERLAIAFGLISTPPRTKLLVTKNLRVCE 606

Query: 746 DCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           DCH   K IS++  R I++RD NR+HHF  G CSC D+W
Sbjct: 607 DCHVVIKLISQIEQREIIIRDVNRYHHFVNGECSCKDHW 645



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 112/393 (28%), Positives = 188/393 (47%), Gaps = 7/393 (1%)

Query: 106 PDNFTYSFVLSAASACC-DRSI--GVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSA 162
           P  + +S   +   +C   R++  G  LH   +VSG G D  +   LVDLY     V  A
Sbjct: 63  PSPYNHSNYATILRSCVLSRAVRPGRQLHARLLVSGTGLDAVLATRLVDLYASCGHVSLA 122

Query: 163 RKVFDKMPEKDTV-LWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVA 221
           R+VFD+MP +  V LWN +I    ++   + +I ++  M+  G    D+ +   VL A A
Sbjct: 123 RRVFDEMPNQGNVFLWNVLIRAYARDGPCEAAIELYRAMLAYGSMKPDNFTYPPVLKACA 182

Query: 222 EVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNA 281
            + +L  G E+    ++  +   V+V TGL+  Y+KCG ++ A  +F D    D    N+
Sbjct: 183 ALLDLSAGREVHDRVMRTNWATDVFVCTGLIDMYAKCGCMDEAWAVFNDTTIRDAAVWNS 242

Query: 282 MISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSG 341
           MI+    NG+   +L L R + A       +T+V  I        L     +H +  + G
Sbjct: 243 MIAACGQNGRPAEALTLCRNMAAEGIAPTIATLVSAISAAAVASALPRGRELHGYGWRRG 302

Query: 342 IVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQ 401
             S   + T+L  +Y++   +  A  LF++   + L SWNAMI G+  +G  + A  LF 
Sbjct: 303 FGSQDKLKTSLLDMYAKSGWVMVAHVLFEQLLHRELISWNAMICGFGMHGHADHAFELFS 362

Query: 402 EMQA-SKVAPNPVTVSSILSACAQLGAISLGKWVHEL-VKSRNFESNIYVSTALIDMYAK 459
            M++ ++V P+ +T   +LSAC   G +   K V +L V   + +  +   T L+D+   
Sbjct: 363 RMRSEAQVMPDHITFVGVLSACNHGGMVQEAKEVFDLMVTVYSIKPTVQHYTCLVDVLGH 422

Query: 460 CGNIVEARELFDLMSHKSEV-TWNTMISGYGLH 491
            G   EA ++   M  K +   W  +++G  +H
Sbjct: 423 SGRFKEASDVIKGMLVKPDSGIWGALLNGCKIH 455



 Score =  132 bits (333), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 119/458 (25%), Positives = 217/458 (47%), Gaps = 49/458 (10%)

Query: 27  QTHAQIIIHGFQNDLSTVTKLAHRLSDFKATC----YARALFFSIP-KPDLFLFNVIIRG 81
           Q HA++++ G   D      LA RL D  A+C     AR +F  +P + ++FL+NV+IR 
Sbjct: 89  QLHARLLVSGTGLD----AVLATRLVDLYASCGHVSLARRVFDEMPNQGNVFLWNVLIRA 144

Query: 82  FSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGS 141
           ++ +   +++I  Y  +    ++ PDNFTY  VL A +A  D S G  +H   + + + +
Sbjct: 145 YARDGPCEAAIELYRAMLAYGSMKPDNFTYPPVLKACAALLDLSAGREVHDRVMRTNWAT 204

Query: 142 DLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMV 201
           D+FV   L+D+Y K   +  A  VF+    +D  +WNSMI+   +N    +++ +  +M 
Sbjct: 205 DVFVCTGLIDMYAKCGCMDEAWAVFNDTTIRDAAVWNSMIAACGQNGRPAEALTLCRNMA 264

Query: 202 RNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEV 261
             G     +T + + + A A    L  G E+   G + GF     + T L+  Y+K G V
Sbjct: 265 AEGIAPTIAT-LVSAISAAAVASALPRGRELHGYGWRRGFGSQDKLKTSLLDMYAKSGWV 323

Query: 262 ERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERV-NSSTIVGLIPV 320
             A +LF  ++  +LIS NAMI G+  +G  + +  LF ++ + A+ + +  T VG++  
Sbjct: 324 MVAHVLFEQLLHRELISWNAMICGFGMHGHADHAFELFSRMRSEAQVMPDHITFVGVL-- 381

Query: 321 FYPFGHLHLTNCIHSFCLKSGIVSNS-SVLTALSTVYSRLNEMEAARKLFDESSEKSLAS 379
                         S C   G+V  +  V   + TVY               S + ++  
Sbjct: 382 --------------SACNHGGMVQEAKEVFDLMVTVY---------------SIKPTVQH 412

Query: 380 WNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKW-VHELV 438
           +  ++     +G  +EA  + + M    V P+     ++L+ C     + L +  + +L+
Sbjct: 413 YTCLVDVLGHSGRFKEASDVIKGML---VKPDSGIWGALLNGCKIHKNVELAELALQKLI 469

Query: 439 KSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHK 476
           +    ++  YV   L ++YA+ G   EA  +  LM+++
Sbjct: 470 ELEPEDAGNYV--LLSNIYAESGKWEEAARVRKLMTNR 505


>gi|224133790|ref|XP_002327681.1| predicted protein [Populus trichocarpa]
 gi|222836766|gb|EEE75159.1| predicted protein [Populus trichocarpa]
          Length = 654

 Score =  408 bits (1048), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 222/582 (38%), Positives = 338/582 (58%), Gaps = 37/582 (6%)

Query: 240 GFHDHVYVLTGLVSFYSKCG-EVERAEL-LFRDIVRPDLISCNAMISGYTCNGKTESSLR 297
           G     YVL  L+   +K    V+   L +F  +  P+    NA+I GY    + + S  
Sbjct: 73  GLDQSCYVLAKLIRTLTKLNIPVDPYPLSIFNQVNYPNPFLYNALIRGYLIEERLKESTE 132

Query: 298 -------------------LFRQLLASAERVNSSTIVGLIPVFYPFGH-LHLTNCIHSFC 337
                              LF+   A  +      I G   +   FG  LH+ N +    
Sbjct: 133 FYSLMRKEGVVPVSFTFTALFKACGAKMDVGLGRQIHGQTILVGGFGEDLHVGNSMIDMY 192

Query: 338 LKSGIVS----------NSSVL--TALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIA 385
           +K G +           N  V+  T L + Y +   ME+A +LFD    K + +W  M++
Sbjct: 193 IKCGFLECGRKVFDEMPNRDVISWTELISAYVKSGNMESAGELFDGLPVKDMVAWTVMVS 252

Query: 386 GYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNF-- 443
           G+ QN    EAI  F++MQ   V  + +T+  ++SACAQLGA     W+ ++ +   F  
Sbjct: 253 GFAQNAKPREAIMFFEKMQEFGVETDEITLIGVISACAQLGAAKYADWIRDVAEKSEFGG 312

Query: 444 ESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSE 503
           + ++ V +ALIDMY+KCG++ +A  +F  M  ++  ++++MI G+ +HG   +A++LF E
Sbjct: 313 KHSVVVGSALIDMYSKCGSVGDAYRVFQGMKERNVYSYSSMILGFAMHGRVHDAMKLFDE 372

Query: 504 MLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAG 563
           M+ + I+P+ VTF+ VL ACSHAG+V +G +IF+ M   +G KP A+HY CMVD+LGRAG
Sbjct: 373 MVKTEIKPNRVTFIGVLTACSHAGMVEQGWQIFELMEKCYGIKPSADHYTCMVDLLGRAG 432

Query: 564 QLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSN 623
           +L++A E +K + +EP   VWGALLGAC IHK  ++A +A+  LFEL+P  +G ++LL+N
Sbjct: 433 RLQEAHELVKTMPIEPHGGVWGALLGACRIHKSPDIAAIAANHLFELEPYCIGNYILLAN 492

Query: 624 IYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEV-GGTPHVFTSGDQLHPQSTAIYAMLE 682
           IY++   +   +TVR++++ R L K P  + IE   G  H F SGD  HP+S  I   LE
Sbjct: 493 IYASCGRWNDVSTVRKLMRTRGLRKNPAFSWIESEKGMVHEFFSGDMTHPRSGEIKQALE 552

Query: 683 KLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLR 742
            L  ++   G+Q    +  +DV +E+K  ++  HSEKLA+AFGLI+T PG++IRI+KNLR
Sbjct: 553 DLLDRLEAKGYQPHLSSVSYDVNDEDKRRILMTHSEKLALAFGLISTIPGSKIRIVKNLR 612

Query: 743 VCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           +C DCH+     S++TGR I+VRD  RFHHF  G+CSCG++W
Sbjct: 613 ICEDCHSVICGASQITGREIIVRDIMRFHHFHDGICSCGNFW 654



 Score =  152 bits (383), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 117/475 (24%), Positives = 218/475 (45%), Gaps = 47/475 (9%)

Query: 13  LSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLS--DFKATCYARALFFSIPKP 70
           ++ L G K  +Q+ Q HA+I+++G       + KL   L+  +     Y  ++F  +  P
Sbjct: 50  VTTLDGCKNLTQIKQVHARILLNGLDQSCYVLAKLIRTLTKLNIPVDPYPLSIFNQVNYP 109

Query: 71  DLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLL 130
           + FL+N +IRG+   E  K S  FY+ +RK   + P +FT++ +  A  A  D  +G  +
Sbjct: 110 NPFLYNALIRGYLIEERLKESTEFYSLMRKE-GVVPVSFTFTALFKACGAKMDVGLGRQI 168

Query: 131 HGHAI-VSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPE------------------ 171
           HG  I V G+G DL VG +++D+Y K  +++  RKVFD+MP                   
Sbjct: 169 HGQTILVGGFGEDLHVGNSMIDMYIKCGFLECGRKVFDEMPNRDVISWTELISAYVKSGN 228

Query: 172 -------------KDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLP 218
                        KD V W  M+SG  +N   +++I  F  M +  G   D  ++  V+ 
Sbjct: 229 MESAGELFDGLPVKDMVAWTVMVSGFAQNAKPREAIMFFEKM-QEFGVETDEITLIGVIS 287

Query: 219 AVAEVQELRLGMEIQCLGLK--LGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDL 276
           A A++   +    I+ +  K   G    V V + L+  YSKCG V  A  +F+ +   ++
Sbjct: 288 ACAQLGAAKYADWIRDVAEKSEFGGKHSVVVGSALIDMYSKCGSVGDAYRVFQGMKERNV 347

Query: 277 ISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSF 336
            S ++MI G+  +G+   +++LF +++ +  + N  T +G++      G +     I   
Sbjct: 348 YSYSSMILGFAMHGRVHDAMKLFDEMVKTEIKPNRVTFIGVLTACSHAGMVEQGWQIFEL 407

Query: 337 CLKS-GIVSNSSVLTALSTVYSRLNEMEAARKLFDESS-EKSLASWNAMIAG---YTQNG 391
             K  GI  ++   T +  +  R   ++ A +L      E     W A++     +    
Sbjct: 408 MEKCYGIKPSADHYTCMVDLLGRAGRLQEAHELVKTMPIEPHGGVWGALLGACRIHKSPD 467

Query: 392 LTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESN 446
           +   A +   E++   +  N + +++I ++C +   +S    V +L+++R    N
Sbjct: 468 IAAIAANHLFELEPYCIG-NYILLANIYASCGRWNDVST---VRKLMRTRGLRKN 518


>gi|242096366|ref|XP_002438673.1| hypothetical protein SORBIDRAFT_10g024090 [Sorghum bicolor]
 gi|241916896|gb|EER90040.1| hypothetical protein SORBIDRAFT_10g024090 [Sorghum bicolor]
          Length = 588

 Score =  408 bits (1048), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 205/563 (36%), Positives = 334/563 (59%), Gaps = 21/563 (3%)

Query: 222 EVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNA 281
           E + LR G ++    +  G+   +Y+ T LV  Y++CG +E A  +   +   +++S  A
Sbjct: 47  ERRALREGRQVHARMVAAGYRPALYLATRLVIMYARCGALEDARNVLDGMPERNVVSWTA 106

Query: 282 MISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSG 341
           MISGY+ N + + +  LF  +L +                     +H    +H+F +K+ 
Sbjct: 107 MISGYSQNERPDQAWELFIMMLRAG--------------------IHQVKQVHAFAVKTN 146

Query: 342 IVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQ 401
              +  V ++L  +Y++   ++ AR++FD    + + S+ A+++GYTQ GL EEA+ LF+
Sbjct: 147 FELHMFVGSSLLDMYAKSENIQEARRVFDMLPARDVVSYTAILSGYTQLGLDEEALDLFR 206

Query: 402 EMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCG 461
            +    +  N VT +++L+A + L ++  GK VH L+  R     + +  +LIDMY+KCG
Sbjct: 207 LLYNEGMQCNQVTFTALLNALSGLSSMDYGKQVHGLILRRELPFFMALQNSLIDMYSKCG 266

Query: 462 NIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLY 521
            ++ +R +FD M  +S V+WN M+ GYG HG   E +QLF  M    ++P  VT L+VL 
Sbjct: 267 KLLYSRRVFDSMPERSVVSWNAMLMGYGRHGLAHEVVQLFRSMCDE-VKPDSVTLLAVLS 325

Query: 522 ACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGP 581
             SH GLV EG ++F  ++ +       EHY C++D+LGR+GQL+KAL  I+ +  +P  
Sbjct: 326 GYSHGGLVDEGLDMFDHIVKEQSTLLNTEHYGCVIDLLGRSGQLQKALNLIEKMPFQPTR 385

Query: 582 AVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVV 641
           A+WG+LLGAC +H + ++    ++KL +++PEN G +V+LSNIY+A   +     VR+++
Sbjct: 386 AIWGSLLGACRVHTNVHVGEFVAQKLLDIEPENAGNYVILSNIYAAAGMWKDVFRVRKLM 445

Query: 642 KKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTAL 701
            K+ + K PG + + +    H F S ++ HP+   I A ++++   ++ AGF  +    L
Sbjct: 446 LKKTVIKEPGRSWMILDKVIHTFHSCERFHPRKEDINAKIKEIYVAIKAAGFVPDLSCVL 505

Query: 702 HDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRV 761
           HDV++E+KE M+  HSEKLAI FGL++T     I+++KNLR+C+DCH   KF+SKV GR 
Sbjct: 506 HDVDDEQKERMLLGHSEKLAITFGLMSTPSDLTIQVMKNLRICVDCHNFAKFVSKVYGRE 565

Query: 762 IVVRDANRFHHFKGGVCSCGDYW 784
           I +RD NRFH    G C+CGDYW
Sbjct: 566 ISLRDKNRFHLITEGACTCGDYW 588



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 100/382 (26%), Positives = 182/382 (47%), Gaps = 29/382 (7%)

Query: 116 SAASACCDRSI---GVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEK 172
            A + C +R     G  +H   + +GY   L++   LV +Y +   ++ AR V D MPE+
Sbjct: 40  DAITECVERRALREGRQVHARMVAAGYRPALYLATRLVIMYARCGALEDARNVLDGMPER 99

Query: 173 DTVLWNSMISGLMKNCCFQDSIW-VFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGME 231
           + V W +MISG  +N    D  W +F  M+R G               + +V+      +
Sbjct: 100 NVVSWTAMISGYSQN-ERPDQAWELFIMMLRAG---------------IHQVK------Q 137

Query: 232 IQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGK 291
           +    +K  F  H++V + L+  Y+K   ++ A  +F  +   D++S  A++SGYT  G 
Sbjct: 138 VHAFAVKTNFELHMFVGSSLLDMYAKSENIQEARRVFDMLPARDVVSYTAILSGYTQLGL 197

Query: 292 TESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTA 351
            E +L LFR L     + N  T   L+        +     +H   L+  +    ++  +
Sbjct: 198 DEEALDLFRLLYNEGMQCNQVTFTALLNALSGLSSMDYGKQVHGLILRRELPFFMALQNS 257

Query: 352 LSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPN 411
           L  +YS+  ++  +R++FD   E+S+ SWNAM+ GY ++GL  E + LF+ M   +V P+
Sbjct: 258 LIDMYSKCGKLLYSRRVFDSMPERSVVSWNAMLMGYGRHGLAHEVVQLFRSM-CDEVKPD 316

Query: 412 PVTVSSILSACAQLGAISLG-KWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELF 470
            VT+ ++LS  +  G +  G      +VK ++   N      +ID+  + G + +A  L 
Sbjct: 317 SVTLLAVLSGYSHGGLVDEGLDMFDHIVKEQSTLLNTEHYGCVIDLLGRSGQLQKALNLI 376

Query: 471 DLMSHK-SEVTWNTMISGYGLH 491
           + M  + +   W +++    +H
Sbjct: 377 EKMPFQPTRAIWGSLLGACRVH 398



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 31/91 (34%), Positives = 54/91 (59%)

Query: 419 LSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSE 478
           ++ C +  A+  G+ VH  + +  +   +Y++T L+ MYA+CG + +AR + D M  ++ 
Sbjct: 42  ITECVERRALREGRQVHARMVAAGYRPALYLATRLVIMYARCGALEDARNVLDGMPERNV 101

Query: 479 VTWNTMISGYGLHGHGLEALQLFSEMLHSGI 509
           V+W  MISGY  +    +A +LF  ML +GI
Sbjct: 102 VSWTAMISGYSQNERPDQAWELFIMMLRAGI 132


>gi|296089078|emb|CBI38781.3| unnamed protein product [Vitis vinifera]
          Length = 589

 Score =  408 bits (1048), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 217/543 (39%), Positives = 321/543 (59%), Gaps = 7/543 (1%)

Query: 249 TGLVSFY--SKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASA 306
           + L+SF   S  G++  A  LF  +  PD   CN MI GY  +     ++ L+  ++   
Sbjct: 47  SKLISFLALSHSGDLNYARKLFTQMQNPDPFICNTMIRGYARSQNPYEAVSLYYFMVERG 106

Query: 307 ERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAAR 366
             V++ T   ++      G + L    H   LK+G  S+  V+ AL   Y        A 
Sbjct: 107 VPVDNYTYPFVLAACARLGAVKLGRRFHCEVLKNGFGSDLFVINALIQFYHNCGSFGCAC 166

Query: 367 KLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEM-QASKVAPNPVTVSSILSACAQL 425
            +FDES+ + + +WN MI  +   GL+E+A  L  EM +   + P+ VT+ S++ ACAQL
Sbjct: 167 DVFDESTVRDVVTWNIMINAHLNKGLSEKAFDLLDEMTKLDNLRPDEVTMVSLVPACAQL 226

Query: 426 GAISLGKWVHELVKSRN-FESN--IYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWN 482
           G +  GK++H   K  + FE N  + + TAL+DMYAKCG+I  A ++F  M  ++  TWN
Sbjct: 227 GNLERGKFLHSYSKELDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMRVRNVFTWN 286

Query: 483 TMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHD 542
            +I G  +HGHG +A+ LF +M H  + P  VTF+++L ACSHAGLV EG  +FQ+M + 
Sbjct: 287 ALIGGLAMHGHGEDAISLFDQMEHDKLMPDDVTFIALLCACSHAGLVDEGLAMFQAMKNK 346

Query: 543 HGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARV 602
              +P  EHY C+VD+L RA +++ AL FI+ + ++    +W  LLGAC      +LA  
Sbjct: 347 FQIEPRMEHYGCVVDLLCRARKVDDALAFIENMPIKANSVLWATLLGACRSGGHFDLAEK 406

Query: 603 ASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPH 662
              ++ EL+P++ G +V+LSN+Y+    +  A  +R+ +K + + K PGC+ IE+ G  H
Sbjct: 407 IGRRVIELEPDSCGRYVMLSNLYAGVSQWDHALKLRKQMKNKGIEKTPGCSWIELNGMIH 466

Query: 663 VFTSGDQLHPQSTAIYAMLEKLNGKMR-EAGFQTETVTALHDVEEEEKELMMKVHSEKLA 721
            F +GD+ H Q+  IYAM+E++  ++  + G    T   L D+EEEEKE  + +HSEKLA
Sbjct: 467 QFVAGDRSHLQTEQIYAMIEEMTRRVNLDGGHVPGTANVLFDIEEEEKEHSLFLHSEKLA 526

Query: 722 IAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCG 781
           IA GLI+T  G+ IRI+KNLRVC DCH+  K  SKV  R IV RD +RFHHFK G CSC 
Sbjct: 527 IALGLISTPSGSPIRIVKNLRVCNDCHSFLKVTSKVYNREIVARDRSRFHHFKEGSCSCM 586

Query: 782 DYW 784
           D+W
Sbjct: 587 DFW 589



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 84/310 (27%), Positives = 149/310 (48%), Gaps = 13/310 (4%)

Query: 14  SLLKGAKTQSQLTQTHAQIIIHG--FQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPD 71
           S+ K  +  + L +TH   ++H   F + L +   L+H   D     YAR LF  +  PD
Sbjct: 23  SISKTKQAHALLLRTH---LLHNPLFSSKLISFLALSHS-GDLN---YARKLFTQMQNPD 75

Query: 72  LFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLH 131
            F+ N +IRG++ ++ P  ++  Y +      +  DN+TY FVL+A +      +G   H
Sbjct: 76  PFICNTMIRGYARSQNPYEAVSLY-YFMVERGVPVDNYTYPFVLAACARLGAVKLGRRFH 134

Query: 132 GHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQ 191
              + +G+GSDLFV  AL+  Y        A  VFD+   +D V WN MI+  +     +
Sbjct: 135 CEVLKNGFGSDLFVINALIQFYHNCGSFGCACDVFDESTVRDVVTWNIMINAHLNKGLSE 194

Query: 192 DSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHD---HVYVL 248
            +  +  +M +      D  ++ +++PA A++  L  G  +     +L   +    + + 
Sbjct: 195 KAFDLLDEMTKLDNLRPDEVTMVSLVPACAQLGNLERGKFLHSYSKELDKFEINCDLVLE 254

Query: 249 TGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAER 308
           T LV  Y+KCG ++ A  +FR +   ++ + NA+I G   +G  E ++ LF Q+      
Sbjct: 255 TALVDMYAKCGSIDLALQVFRRMRVRNVFTWNALIGGLAMHGHGEDAISLFDQMEHDKLM 314

Query: 309 VNSSTIVGLI 318
            +  T + L+
Sbjct: 315 PDDVTFIALL 324


>gi|115465559|ref|NP_001056379.1| Os05g0572900 [Oryza sativa Japonica Group]
 gi|52353535|gb|AAU44101.1| unknown protein [Oryza sativa Japonica Group]
 gi|113579930|dbj|BAF18293.1| Os05g0572900 [Oryza sativa Japonica Group]
 gi|215737011|dbj|BAG95940.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 687

 Score =  407 bits (1047), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 227/660 (34%), Positives = 369/660 (55%), Gaps = 5/660 (0%)

Query: 125 SIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGL 184
           S+G  +H   +V     D+     L+ LY K   +  AR+VFD MP ++ V  N ++SG 
Sbjct: 33  SLGKAVHAR-VVRAARFDVVQYNNLIALYVKCGRLGLARQVFDAMPSRNPVSGNLLMSGY 91

Query: 185 MKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDH 244
             +   +D++     ++R     L+   +++ + A A V+   +G +     +K G  +H
Sbjct: 92  ASSGRHRDAL----ALLRVADFGLNEYVLSSAVAATAHVRSYDMGRQCHGYAIKAGLAEH 147

Query: 245 VYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLA 304
            YV + ++  Y +C  ++ A  +F ++   ++ + N+MI+G+   G+ + S  + R ++ 
Sbjct: 148 PYVCSAVLHMYCQCAHMDEAVKVFDNVSSFNVFAFNSMINGFLDRGQMDGSTSIVRSMVR 207

Query: 305 SAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEA 364
           +  + +  + V ++        + L + +H+  LK  +  N  V +AL  +Y + +    
Sbjct: 208 NVGQWDHVSYVAVLGHCASTKEVVLGSQVHTQALKRRLELNVYVGSALVDMYGKCDFPHE 267

Query: 365 ARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQ 424
           A ++F+   EK++ SW A++  YTQN L E+A+ LF +M+   V PN  T +  L++CA 
Sbjct: 268 ANRVFEVLPEKNIVSWTAIMTAYTQNELFEDALQLFLDMEMEGVRPNEFTYAVALNSCAG 327

Query: 425 LGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTM 484
           L  +  G  +            + V  AL++MY+K G++ +AR +F  M  +  V+WN++
Sbjct: 328 LATLKNGNALGACTMKTGHWGLLPVCNALMNMYSKSGSVEDARRVFLSMPCRDVVSWNSI 387

Query: 485 ISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHG 544
           I GY  HG   EA++ F +ML +   PS VTF+ VL AC+  GLV EG      M+ + G
Sbjct: 388 IIGYAHHGRAREAMEAFHDMLFAEEVPSYVTFIGVLSACAQLGLVDEGFYYLNIMMKEVG 447

Query: 545 FKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVAS 604
            KP  EHY CMV +L R G+L++A  FI+   +      W +LL +C ++++  L    +
Sbjct: 448 VKPGKEHYTCMVGLLCRVGRLDEAERFIESNCIGTDVVAWRSLLSSCQVYRNYGLGHRVA 507

Query: 605 EKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVF 664
           E++F+L P++VG +VLLSN+Y+    +     VR+++++  + K PG + I+VG   HVF
Sbjct: 508 EQIFQLKPKDVGTYVLLSNMYAKANRWDGVVKVRRLMRELGVRKEPGVSWIQVGSEVHVF 567

Query: 665 TSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAF 724
           TS D+ HP    I   L++L  K++  G+      ALHDVE+E+KE  +  HSEKLA+AF
Sbjct: 568 TSEDKKHPYMEQITKKLQELIDKIKVIGYVPNIAVALHDVEDEQKEEHLMYHSEKLALAF 627

Query: 725 GLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           GLI T  G  IRI+KN+R+C DCH A K IS  TGR IVVRD  RFH  + GVCSC DYW
Sbjct: 628 GLIRTPKGEAIRIMKNVRICDDCHVAIKLISLATGRRIVVRDTVRFHCIEDGVCSCDDYW 687



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 126/474 (26%), Positives = 224/474 (47%), Gaps = 24/474 (5%)

Query: 60  ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
           AR +F ++P  +    N+++ G++++   + ++     L +      + +  S  ++A +
Sbjct: 69  ARQVFDAMPSRNPVSGNLLMSGYASSGRHRDALA----LLRVADFGLNEYVLSSAVAATA 124

Query: 120 ACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNS 179
                 +G   HG+AI +G     +V +A++ +Y + + +  A KVFD +   +   +NS
Sbjct: 125 HVRSYDMGRQCHGYAIKAGLAEHPYVCSAVLHMYCQCAHMDEAVKVFDNVSSFNVFAFNS 184

Query: 180 MISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKL 239
           MI+G +       S  +   MVRN G W D  S  AVL   A  +E+ LG ++    LK 
Sbjct: 185 MINGFLDRGQMDGSTSIVRSMVRNVGQW-DHVSYVAVLGHCASTKEVVLGSQVHTQALKR 243

Query: 240 GFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLF 299
               +VYV + LV  Y KC     A  +F  +   +++S  A+++ YT N   E +L+LF
Sbjct: 244 RLELNVYVGSALVDMYGKCDFPHEANRVFEVLPEKNIVSWTAIMTAYTQNELFEDALQLF 303

Query: 300 RQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRL 359
             +     R N  T    +        L   N + +  +K+G      V  AL  +YS+ 
Sbjct: 304 LDMEMEGVRPNEFTYAVALNSCAGLATLKNGNALGACTMKTGHWGLLPVCNALMNMYSKS 363

Query: 360 NEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSIL 419
             +E AR++F     + + SWN++I GY  +G   EA+  F +M  ++  P+ VT   +L
Sbjct: 364 GSVEDARRVFLSMPCRDVVSWNSIIIGYAHHGRAREAMEAFHDMLFAEEVPSYVTFIGVL 423

Query: 420 SACAQLGAISLG-KWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSE 478
           SACAQLG +  G  +++ ++K    +      T ++ +  + G + EA    +     ++
Sbjct: 424 SACAQLGLVDEGFYYLNIMMKEVGVKPGKEHYTCMVGLLCRVGRLDEAERFIESNCIGTD 483

Query: 479 VT-WNTMIS------GYGLHGHGLEALQLFSEMLHSGIRPSGV---TFLSVLYA 522
           V  W +++S       YGL GH + A Q+F       ++P  V     LS +YA
Sbjct: 484 VVAWRSLLSSCQVYRNYGL-GHRV-AEQIFQ------LKPKDVGTYVLLSNMYA 529



 Score =  105 bits (262), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 106/463 (22%), Positives = 200/463 (43%), Gaps = 47/463 (10%)

Query: 27  QTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNE 86
           Q H   I  G        + + H          A  +F ++   ++F FN +I GF +  
Sbjct: 134 QCHGYAIKAGLAEHPYVCSAVLHMYCQCAHMDEAVKVFDNVSSFNVFAFNSMINGFLDRG 193

Query: 87  MPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVG 146
               S      + +N     D+ +Y  VL   ++  +  +G  +H  A+      +++VG
Sbjct: 194 QMDGSTSIVRSMVRNVG-QWDHVSYVAVLGHCASTKEVVLGSQVHTQALKRRLELNVYVG 252

Query: 147 AALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGT 206
           +ALVD+Y K  +   A +VF+ +PEK+ V W ++++   +N  F+D++ +F DM    G 
Sbjct: 253 SALVDMYGKCDFPHEANRVFEVLPEKNIVSWTAIMTAYTQNELFEDALQLFLDMEME-GV 311

Query: 207 WLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAEL 266
             +  + A  L + A +  L+ G  +    +K G    + V   L++ YSK G VE A  
Sbjct: 312 RPNEFTYAVALNSCAGLATLKNGNALGACTMKTGHWGLLPVCNALMNMYSKSGSVEDARR 371

Query: 267 LFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGH 326
           +F  +   D++S N++I GY  +G+   ++  F  +L + E  +  T +G++        
Sbjct: 372 VFLSMPCRDVVSWNSIIIGYAHHGRAREAMEAFHDMLFAEEVPSYVTFIGVL-------- 423

Query: 327 LHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAG 386
                   S C + G+V            +  LN M     + +   +     +  M+  
Sbjct: 424 --------SACAQLGLVDEG---------FYYLNIM-----MKEVGVKPGKEHYTCMVGL 461

Query: 387 YTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELV---KSRNF 443
             + G  +EA      ++++ +  + V   S+LS+C       LG  V E +   K ++ 
Sbjct: 462 LCRVGRLDEAERF---IESNCIGTDVVAWRSLLSSCQVYRNYGLGHRVAEQIFQLKPKDV 518

Query: 444 ESNIYVSTALIDMYAKCGN---IVEARELFDLMSHKSE--VTW 481
            + + +S    +MYAK      +V+ R L   +  + E  V+W
Sbjct: 519 GTYVLLS----NMYAKANRWDGVVKVRRLMRELGVRKEPGVSW 557



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 38/106 (35%), Positives = 57/106 (53%), Gaps = 9/106 (8%)

Query: 403 MQASKVAPNPVTVSSILSACAQL------GAISLGKWVH-ELVKSRNFESNIYVSTALID 455
           M A++  P  V+V    +A A L      G +SLGK VH  +V++  F+   Y    LI 
Sbjct: 1   MAAARACPMGVSVDQRRAAVAVLRAAAAAGELSLGKAVHARVVRAARFDVVQY--NNLIA 58

Query: 456 MYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLF 501
           +Y KCG +  AR++FD M  ++ V+ N ++SGY   G   +AL L 
Sbjct: 59  LYVKCGRLGLARQVFDAMPSRNPVSGNLLMSGYASSGRHRDALALL 104


>gi|15242443|ref|NP_198784.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171206|sp|Q9FK93.1|PP406_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g39680; AltName: Full=Protein EMBRYO DEFECTIVE 2744
 gi|9758344|dbj|BAB08900.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|332007080|gb|AED94463.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 710

 Score =  407 bits (1047), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 222/662 (33%), Positives = 360/662 (54%), Gaps = 3/662 (0%)

Query: 126 IGVLLHGHAIVSGYGS---DLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMIS 182
           IG  +H H IV+   S   D +   +L++LY K      ARK+FD MPE++ V W +M+ 
Sbjct: 49  IGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFDLMPERNVVSWCAMMK 108

Query: 183 GLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFH 242
           G   +    + + +F  M  +G +  +      V  + +    +  G +     LK G  
Sbjct: 109 GYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIEEGKQFHGCFLKYGLI 168

Query: 243 DHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQL 302
            H +V   LV  YS C     A  +  D+   DL   ++ +SGY   G  +  L + R+ 
Sbjct: 169 SHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGYLECGAFKEGLDVLRKT 228

Query: 303 LASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEM 362
                  N+ T +  + +F     L+L   +HS  ++ G  +      AL  +Y +  ++
Sbjct: 229 ANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVRFGFNAEVEACGALINMYGKCGKV 288

Query: 363 EAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSAC 422
             A+++FD++  +++     ++  Y Q+   EEA++LF +M   +V PN  T + +L++ 
Sbjct: 289 LYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAILLNSI 348

Query: 423 AQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWN 482
           A+L  +  G  +H LV    + +++ V  AL++MYAK G+I +AR+ F  M+ +  VTWN
Sbjct: 349 AELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKAFSGMTFRDIVTWN 408

Query: 483 TMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHD 542
           TMISG   HG G EAL+ F  M+ +G  P+ +TF+ VL ACSH G V +G   F  ++  
Sbjct: 409 TMISGCSHHGLGREALEAFDRMIFTGEIPNRITFIGVLQACSHIGFVEQGLHYFNQLMKK 468

Query: 543 HGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARV 602
              +P  +HY C+V +L +AG  + A +F++   +E     W  LL AC + ++  L + 
Sbjct: 469 FDVQPDIQHYTCIVGLLSKAGMFKDAEDFMRTAPIEWDVVAWRTLLNACYVRRNYRLGKK 528

Query: 603 ASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPH 662
            +E   E  P + G +VLLSNI++  R++   A VR ++  R + K PG + I +    H
Sbjct: 529 VAEYAIEKYPNDSGVYVLLSNIHAKSREWEGVAKVRSLMNNRGVKKEPGVSWIGIRNQTH 588

Query: 663 VFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAI 722
           VF + D  HP+ T IYA ++++  K++  G+  +   A HDV+EE++E  +  HSEKLA+
Sbjct: 589 VFLAEDNQHPEITLIYAKVKEVMSKIKPLGYSPDVAGAFHDVDEEQREDNLSYHSEKLAV 648

Query: 723 AFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGD 782
           A+GLI T   + + + KN+R+C DCH+A K ISK++ R IV+RD+NRFHHF  G CSC D
Sbjct: 649 AYGLIKTPEKSPLYVTKNVRICDDCHSAIKLISKISKRYIVIRDSNRFHHFLDGQCSCCD 708

Query: 783 YW 784
           YW
Sbjct: 709 YW 710



 Score = 86.7 bits (213), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 65/255 (25%), Positives = 125/255 (49%), Gaps = 6/255 (2%)

Query: 66  SIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRK--NTALTPDNFTYSFVLSAASACCD 123
            +P  DL +F+  + G+      K  +     LRK  N     +N TY   L   S   D
Sbjct: 196 DLPYCDLSVFSSALSGYLECGAFKEGL---DVLRKTANEDFVWNNLTYLSSLRLFSNLRD 252

Query: 124 RSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISG 183
            ++ + +H   +  G+ +++    AL+++Y K   V  A++VFD    ++  L  +++  
Sbjct: 253 LNLALQVHSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDA 312

Query: 184 LMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHD 243
             ++  F++++ +F  M        +  + A +L ++AE+  L+ G  +  L LK G+ +
Sbjct: 313 YFQDKSFEEALNLFSKM-DTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRN 371

Query: 244 HVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLL 303
           HV V   LV+ Y+K G +E A   F  +   D+++ N MISG + +G    +L  F +++
Sbjct: 372 HVMVGNALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMI 431

Query: 304 ASAERVNSSTIVGLI 318
            + E  N  T +G++
Sbjct: 432 FTGEIPNRITFIGVL 446



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 61/258 (23%), Positives = 117/258 (45%), Gaps = 3/258 (1%)

Query: 13  LSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDL 72
           L L    +  +   Q H++++  GF  ++     L +         YA+ +F      ++
Sbjct: 244 LRLFSNLRDLNLALQVHSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNI 303

Query: 73  FLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHG 132
           FL   I+  +  ++  + ++  ++ +     + P+ +T++ +L++ +       G LLHG
Sbjct: 304 FLNTTIMDAYFQDKSFEEALNLFSKM-DTKEVPPNEYTFAILLNSIAELSLLKQGDLLHG 362

Query: 133 HAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQD 192
             + SGY + + VG ALV++Y K   ++ ARK F  M  +D V WN+MISG   +   ++
Sbjct: 363 LVLKSGYRNHVMVGNALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGRE 422

Query: 193 SIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGME-IQCLGLKLGFHDHVYVLTGL 251
           ++  F  M+  G    +  +   VL A + +  +  G+     L  K      +   T +
Sbjct: 423 ALEAFDRMIFTGEI-PNRITFIGVLQACSHIGFVEQGLHYFNQLMKKFDVQPDIQHYTCI 481

Query: 252 VSFYSKCGEVERAELLFR 269
           V   SK G  + AE   R
Sbjct: 482 VGLLSKAGMFKDAEDFMR 499


>gi|242055643|ref|XP_002456967.1| hypothetical protein SORBIDRAFT_03g046490 [Sorghum bicolor]
 gi|241928942|gb|EES02087.1| hypothetical protein SORBIDRAFT_03g046490 [Sorghum bicolor]
          Length = 785

 Score =  407 bits (1047), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 229/737 (31%), Positives = 391/737 (53%), Gaps = 10/737 (1%)

Query: 56  ATCYARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVL 115
           A  +A  L   +P+ +   +N++I  +S   +P  ++  +   R    L  D FTY+  L
Sbjct: 51  APLHAARLIDEMPRRNAVSYNLLISSYSRAGLPGRALETFARARAAAGLRVDRFTYAAAL 110

Query: 116 SAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTV 175
           +A S   D   G  +H   ++ G G+ +F+  +L  +Y     +  AR+VFD   E D V
Sbjct: 111 AACSRALDLRTGKAVHAMTVLDGLGNGVFLSNSLASMYASCGEMGEARRVFDAAEEHDDV 170

Query: 176 LWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQEL--RLGMEIQ 233
            WNS++SG ++    ++++ VF  M  +G  W +S ++ +++   A   ++   +   + 
Sbjct: 171 SWNSLLSGYVRAGAREETLKVFSLMCHHGLGW-NSFALGSIIKCCASGSDVGRHIAEAVH 229

Query: 234 CLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCN---- 289
              +K G    +++ + ++  Y+K G +  A  LF+ +  P++I  NAMI+G+  +    
Sbjct: 230 GCVVKAGLDADLFLASAMIDMYAKRGALTNAVALFKSVPDPNVIVFNAMIAGFCRDEAAV 289

Query: 290 GK--TESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSS 347
           GK  +  +L L+ ++ +   + +  T   ++      G       IH   LK     +  
Sbjct: 290 GKEVSREALSLYSEMQSRGMQPSEFTFSSILRACNLAGEFGFGKQIHGQVLKHSFHDDDY 349

Query: 348 VLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASK 407
           + +AL  +YS    ME   + F    ++ + +W +MI+G  QN L E+A+ LFQE     
Sbjct: 350 IGSALIDLYSDSGCMEDGYRCFRSLPKQDIVTWTSMISGCVQNELFEKALRLFQESICYG 409

Query: 408 VAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEAR 467
           + P+  T+SS+++ACA L     G+ +  L     F     +  + I M A+ G++    
Sbjct: 410 LKPDLFTMSSVMNACASLAVARTGEQIQCLAIKYGFNRFTAMGNSFIHMCARSGDVDAVT 469

Query: 468 ELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAG 527
             F  M  +  V+W+ +IS +  HG   +AL++F+EM+++ + P+ VTFL+VL ACSH G
Sbjct: 470 RRFQEMESRDVVSWSAVISSHAQHGCARDALRIFNEMMNAKVAPNEVTFLNVLTACSHGG 529

Query: 528 LVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGAL 587
           LV +G   ++ M +++G  P  +H  C+VD+LGRAG+L  A  FI+  A      VW +L
Sbjct: 530 LVDDGLRYYEIMKNEYGLSPTIKHVTCVVDLLGRAGRLADAEAFIRDSAFHDDAVVWRSL 589

Query: 588 LGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLA 647
           L +C IH D    ++ ++++ +L+P +   +V+L N+Y    +   A+  R ++K+R + 
Sbjct: 590 LASCRIHGDMERGQLVADQIMDLEPTSSASYVILYNMYLDAGELSLASKTRDLMKERGVK 649

Query: 648 KAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEE 707
           K PG + IE+    H F +GD+ HP+S AIY  L ++  K+ +        T    +   
Sbjct: 650 KEPGLSWIELRSGVHSFVAGDKSHPESNAIYKKLAEMLSKIEKLANTDNASTGSDGISSS 709

Query: 708 EKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDA 767
           E+ L +  HSEK+A+AFG+I       IR++KNLRVC DCH+  K IS    R I++RD 
Sbjct: 710 EQNL-VGCHSEKIAVAFGMIHLPQSAPIRVMKNLRVCRDCHSTMKLISGSENREIILRDG 768

Query: 768 NRFHHFKGGVCSCGDYW 784
            RFHHF+GG CSCGDYW
Sbjct: 769 IRFHHFRGGSCSCGDYW 785



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 81/321 (25%), Positives = 160/321 (49%), Gaps = 19/321 (5%)

Query: 28  THAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNN-- 85
            H  ++  G   DL   + +    +   A   A ALF S+P P++ +FN +I GF  +  
Sbjct: 228 VHGCVVKAGLDADLFLASAMIDMYAKRGALTNAVALFKSVPDPNVIVFNAMIAGFCRDEA 287

Query: 86  ----EMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGS 141
               E+ + ++  Y+ + ++  + P  FT+S +L A +   +   G  +HG  +   +  
Sbjct: 288 AVGKEVSREALSLYSEM-QSRGMQPSEFTFSSILRACNLAGEFGFGKQIHGQVLKHSFHD 346

Query: 142 DLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMV 201
           D ++G+AL+DLY     ++   + F  +P++D V W SMISG ++N  F+ ++ +F + +
Sbjct: 347 DDYIGSALIDLYSDSGCMEDGYRCFRSLPKQDIVTWTSMISGCVQNELFEKALRLFQESI 406

Query: 202 RNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEV 261
              G   D  ++++V+ A A +   R G +IQCL +K GF+    +    +   ++ G+V
Sbjct: 407 CY-GLKPDLFTMSSVMNACASLAVARTGEQIQCLAIKYGFNRFTAMGNSFIHMCARSGDV 465

Query: 262 ERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVF 321
           +     F+++   D++S +A+IS +  +G    +LR+F +++ +    N  T + +    
Sbjct: 466 DAVTRRFQEMESRDVVSWSAVISSHAQHGCARDALRIFNEMMNAKVAPNEVTFLNV---- 521

Query: 322 YPFGHLHLTNCIHSFCLKSGI 342
                  LT C H   +  G+
Sbjct: 522 -------LTACSHGGLVDDGL 535


>gi|15222566|ref|NP_173907.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75172213|sp|Q9FRI5.1|PPR57_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g25360
 gi|11067273|gb|AAG28801.1|AC079374_4 hypothetical protein [Arabidopsis thaliana]
 gi|332192491|gb|AEE30612.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 790

 Score =  407 bits (1047), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 252/761 (33%), Positives = 382/761 (50%), Gaps = 112/761 (14%)

Query: 130 LHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPE------------------ 171
           +HG+ I  G+     +   L+D+Y K S +  AR++FD++ E                  
Sbjct: 36  VHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIARTTMVSGYCASGD 95

Query: 172 ---------------KDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAV 216
                          +DTV++N+MI+G   N     +I +F  M ++ G   D+ + A+V
Sbjct: 96  ITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKM-KHEGFKPDNFTFASV 154

Query: 217 LPAVAEVQELRLGMEIQCL-----GLKLGFHDHVYVLTGLVSFYSKCGE----VERAELL 267
           L  +A V +     E QC+      LK G      V   LVS YSKC      +  A  +
Sbjct: 155 LAGLALVAD----DEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKV 210

Query: 268 FRDIVRPD--------------------------------LISCNAMISGYTCNGKTESS 295
           F +I+  D                                L++ NAMISGY   G  + +
Sbjct: 211 FDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEA 270

Query: 296 LRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTV 355
           L + R++++S   ++  T   +I      G L L   +H++ L+    S      +L ++
Sbjct: 271 LEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDFS-FHFDNSLVSL 329

Query: 356 YSRLNEMEAARKLFDESSEKSLASWNAMIAGYT--------------------------- 388
           Y +  + + AR +F++   K L SWNA+++GY                            
Sbjct: 330 YYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMI 389

Query: 389 ----QNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFE 444
               +NG  EE + LF  M+     P     S  + +CA LGA   G+  H  +    F+
Sbjct: 390 SGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFD 449

Query: 445 SNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEM 504
           S++    ALI MYAKCG + EAR++F  M     V+WN +I+  G HGHG EA+ ++ EM
Sbjct: 450 SSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEM 509

Query: 505 LHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQ 564
           L  GIRP  +T L+VL ACSHAGLV +G + F SM   +   P A+HYA ++D+L R+G+
Sbjct: 510 LKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGK 569

Query: 565 LEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNI 624
              A   I+ L  +P   +W ALL  C +H +  L  +A++KLF L PE+ G ++LLSN+
Sbjct: 570 FSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPEHDGTYMLLSNM 629

Query: 625 YSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKL 684
           ++A   + + A VR++++ R + K   C+ IE+    H F   D  HP++ A+Y  L+ L
Sbjct: 630 HAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHTFLVDDTSHPEAEAVYIYLQDL 689

Query: 685 NGKMREAGFQTETVTALHDVEEE-EKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRV 743
             +MR  G+  +T   LHDVE +  KE M+  HSEK+A+AFGL+   PGT IRI KNLR 
Sbjct: 690 GKEMRRLGYVPDTSFVLHDVESDGHKEDMLTTHSEKIAVAFGLMKLPPGTTIRIFKNLRT 749

Query: 744 CLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
           C DCH   +F+S V  R I++RD  RFHHF+ G CSCG++W
Sbjct: 750 CGDCHNFFRFLSWVVQRDIILRDRKRFHHFRNGECSCGNFW 790



 Score =  159 bits (402), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 152/582 (26%), Positives = 243/582 (41%), Gaps = 115/582 (19%)

Query: 20  KTQSQLTQ-THAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPD------- 71
           +T  QL +  H  II  GFQ     + +L           YAR LF  I +PD       
Sbjct: 27  RTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIARTTM 86

Query: 72  --------------------------LFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALT 105
                                       ++N +I GFS+N    S+I  +  + K+    
Sbjct: 87  VSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKM-KHEGFK 145

Query: 106 PDNFTYSFVLSA-ASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKF----SWVK 160
           PDNFT++ VL+  A    D    V  H  A+ SG G    V  ALV +Y K     S + 
Sbjct: 146 PDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLH 205

Query: 161 SARKVFDKMPEKDTVLWNSMISGLMKNCCF----------QDSIWVFG------------ 198
           SARKVFD++ EKD   W +M++G +KN  F           D++ +              
Sbjct: 206 SARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRG 265

Query: 199 ------DMVR---NGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLK---LGFHDHVY 246
                 +MVR   + G  LD  +  +V+ A A    L+LG ++    L+     FH    
Sbjct: 266 FYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDFSFH---- 321

Query: 247 VLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASA 306
               LVS Y KCG+ + A  +F  +   DL+S NA++SGY  +G    +  +F+++    
Sbjct: 322 FDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEM--KE 379

Query: 307 ERVNSSTIV-----------------------GLIPVFYPF-GHLHLTNCIHSFC----- 337
           + + S  I+                       G  P  Y F G +     + ++C     
Sbjct: 380 KNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQY 439

Query: 338 ----LKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLT 393
               LK G  S+ S   AL T+Y++   +E AR++F         SWNA+IA   Q+G  
Sbjct: 440 HAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHG 499

Query: 394 EEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLG-KWVHELVKSRNFESNIYVSTA 452
            EA+ +++EM    + P+ +T+ ++L+AC+  G +  G K+   +               
Sbjct: 500 AEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYAR 559

Query: 453 LIDMYAKCGNIVEARELFDLMSHKSEV-TWNTMISGYGLHGH 493
           LID+  + G   +A  + + +  K     W  ++SG  +HG+
Sbjct: 560 LIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGN 601



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 81/342 (23%), Positives = 139/342 (40%), Gaps = 93/342 (27%)

Query: 327 LHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSE------------ 374
           L L   +H   +  G    + +L  L  VY + +E+  AR+LFDE SE            
Sbjct: 30  LQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIARTTMVSG 89

Query: 375 ---------------------KSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPV 413
                                +    +NAMI G++ N     AI+LF +M+     P+  
Sbjct: 90  YCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNF 149

Query: 414 TVSSILSA----------CAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGN- 462
           T +S+L+           C Q  A +L      +           VS AL+ +Y+KC + 
Sbjct: 150 TFASVLAGLALVADDEKQCVQFHAAALKSGAGYITS---------VSNALVSVYSKCASS 200

Query: 463 ---IVEARELFDLMSHKSEVTWNTMISGYGLHGH---------GL--------------- 495
              +  AR++FD +  K E +W TM++GY  +G+         G+               
Sbjct: 201 PSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISG 260

Query: 496 --------EALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKP 547
                   EAL++   M+ SGI     T+ SV+ AC+ AGL++ G ++   ++    F  
Sbjct: 261 YVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDF-- 318

Query: 548 LAEHYA-CMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALL 588
            + H+   +V +  + G+ ++A    + +  +     W ALL
Sbjct: 319 -SFHFDNSLVSLYYKCGKFDEARAIFEKMPAKD-LVSWNALL 358



 Score = 55.8 bits (133), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 46/167 (27%), Positives = 66/167 (39%), Gaps = 47/167 (28%)

Query: 410 PNPVTVSSI-------LSACAQL--GAISLGKWVHELVKSRNFESNIYVSTALIDMYAKC 460
           PNP  V +I       L  C  L   ++ L + VH  + +  F+   ++   LID+Y K 
Sbjct: 3   PNPDLVRAIANRYAANLRLCLPLRRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKS 62

Query: 461 GNIVEARELFDLMSHKSEVTWNTMISGYGLHG---------------------------- 492
             +  AR+LFD +S   ++   TM+SGY   G                            
Sbjct: 63  SELNYARQLFDEISEPDKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITG 122

Query: 493 -----HGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDE 534
                 G  A+ LF +M H G +P   TF SVL     AGL    D+
Sbjct: 123 FSHNNDGYSAINLFCKMKHEGFKPDNFTFASVL-----AGLALVADD 164



 Score = 43.1 bits (100), Expect = 0.62,   Method: Compositional matrix adjust.
 Identities = 57/251 (22%), Positives = 102/251 (40%), Gaps = 30/251 (11%)

Query: 18  GAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNV 77
           GA    Q  Q HAQ++  GF + LS    L    +       AR +F ++P  D   +N 
Sbjct: 431 GAYCNGQ--QYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNA 488

Query: 78  IIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVS 137
           +I     +     ++  Y  + K   + PD  T   VL+A S       G++  G     
Sbjct: 489 LIAALGQHGHGAEAVDVYEEMLKK-GIRPDRITLLTVLTACS-----HAGLVDQGRKYFD 542

Query: 138 GY--------GSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTV-LWNSMISGLMKNC 188
                     G+D +  A L+DL  +      A  V + +P K T  +W +++SG   + 
Sbjct: 543 SMETVYRIPPGADHY--ARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHG 600

Query: 189 CFQDSIW----VFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGM-------EIQCLGL 237
             +  I     +FG +  + GT++  +++ A      EV  +R  M       E+ C  +
Sbjct: 601 NMELGIIAADKLFGLIPEHDGTYMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVACSWI 660

Query: 238 KLGFHDHVYVL 248
           ++    H +++
Sbjct: 661 EMETQVHTFLV 671


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.322    0.135    0.405 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,741,362,562
Number of Sequences: 23463169
Number of extensions: 466889418
Number of successful extensions: 1343842
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 9543
Number of HSP's successfully gapped in prelim test: 2561
Number of HSP's that attempted gapping in prelim test: 1157626
Number of HSP's gapped (non-prelim): 59849
length of query: 784
length of database: 8,064,228,071
effective HSP length: 151
effective length of query: 633
effective length of database: 8,816,256,848
effective search space: 5580690584784
effective search space used: 5580690584784
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 81 (35.8 bits)