BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 044131
(784 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SUH6|PP341_ARATH Pentatricopeptide repeat-containing protein At4g30700
OS=Arabidopsis thaliana GN=DYW9 PE=2 SV=1
Length = 792
Score = 1103 bits (2852), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 523/777 (67%), Positives = 631/777 (81%), Gaps = 3/777 (0%)
Query: 8 SRNLFLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSI 67
S+N +L K + + S L QTHAQII+HGF+ND+S +TKL RLSD A YAR +F S+
Sbjct: 19 SKNTYLDFFKRSTSISHLAQTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSV 78
Query: 68 PKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIG 127
+PD+FLFNV++RGFS NE P SS+ + HLRK+T L P++ TY+F +SAAS D G
Sbjct: 79 QRPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAG 138
Query: 128 VLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKN 187
++HG A+V G S+L +G+ +V +YFKF V+ ARKVFD+MPEKDT+LWN+MISG KN
Sbjct: 139 RVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKN 198
Query: 188 CCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYV 247
+ +SI VF D++ T LD+T++ +LPAVAE+QELRLGM+I L K G + H YV
Sbjct: 199 EMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYV 258
Query: 248 LTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAE 307
LTG +S YSKCG+++ LFR+ +PD+++ NAMI GYT NG+TE SL LF++L+ S
Sbjct: 259 LTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGA 318
Query: 308 RVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARK 367
R+ SST+V L+PV GHL L IH +CLKS +S++SV TAL+TVYS+LNE+E+ARK
Sbjct: 319 RLRSSTLVSLVPVS---GHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARK 375
Query: 368 LFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGA 427
LFDES EKSL SWNAMI+GYTQNGLTE+AISLF+EMQ S+ +PNPVT++ ILSACAQLGA
Sbjct: 376 LFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGA 435
Query: 428 ISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISG 487
+SLGKWVH+LV+S +FES+IYVSTALI MYAKCG+I EAR LFDLM+ K+EVTWNTMISG
Sbjct: 436 LSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISG 495
Query: 488 YGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKP 547
YGLHG G EAL +F EML+SGI P+ VTFL VLYACSHAGLV+EGDEIF SMIH +GF+P
Sbjct: 496 YGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEP 555
Query: 548 LAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKL 607
+HYACMVDILGRAG L++AL+FI+ +++EPG +VW LLGAC IHKDTNLAR SEKL
Sbjct: 556 SVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKL 615
Query: 608 FELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSG 667
FELDP+NVGYHVLLSNI+SA+R+Y QAATVRQ KKRKLAKAPG TLIE+G TPHVFTSG
Sbjct: 616 FELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSG 675
Query: 668 DQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLI 727
DQ HPQ IY LEKL GKMREAG+Q ET ALHDVEEEE+ELM+KVHSE+LAIAFGLI
Sbjct: 676 DQSHPQVKEIYEKLEKLEGKMREAGYQPETELALHDVEEEERELMVKVHSERLAIAFGLI 735
Query: 728 ATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
ATEPGTEIRIIKNLRVCLDCHT TK ISK+T RVIVVRDANRFHHFK GVCSCGDYW
Sbjct: 736 ATEPGTEIRIIKNLRVCLDCHTVTKLISKITERVIVVRDANRFHHFKDGVCSCGDYW 792
>sp|Q3E6Q1|PPR32_ARATH Pentatricopeptide repeat-containing protein At1g11290
OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1
Length = 809
Score = 573 bits (1477), Expect = e-162, Method: Compositional matrix adjust.
Identities = 297/770 (38%), Positives = 454/770 (58%), Gaps = 3/770 (0%)
Query: 15 LLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFL 74
LL+ + +L Q + +G + TKL + + A +F I L
Sbjct: 43 LLERCSSLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVL 102
Query: 75 FNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHA 134
++ +++GF+ ++ F+ +R + + P + ++++L + +G +HG
Sbjct: 103 YHTMLKGFAKVSDLDKALQFFVRMRYDD-VEPVVYNFTYLLKVCGDEAELRVGKEIHGLL 161
Query: 135 IVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSI 194
+ SG+ DLF L ++Y K V ARKVFD+MPE+D V WN++++G +N + ++
Sbjct: 162 VKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMAL 221
Query: 195 WVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSF 254
+ M ++ +VLPAV+ ++ + +G EI ++ GF V + T LV
Sbjct: 222 EMVKSMCEEN-LKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDM 280
Query: 255 YSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTI 314
Y+KCG +E A LF ++ +++S N+MI Y N + ++ +F+++L + ++
Sbjct: 281 YAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSV 340
Query: 315 VGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSE 374
+G + G L IH ++ G+ N SV+ +L ++Y + E++ A +F +
Sbjct: 341 MGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQS 400
Query: 375 KSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWV 434
++L SWNAMI G+ QNG +A++ F +M++ V P+ T S+++A A+L KW+
Sbjct: 401 RTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWI 460
Query: 435 HELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHG 494
H +V + N++V+TAL+DMYAKCG I+ AR +FD+MS + TWN MI GYG HG G
Sbjct: 461 HGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFG 520
Query: 495 LEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYAC 554
AL+LF EM I+P+GVTFLSV+ ACSH+GLV G + F M ++ + +HY
Sbjct: 521 KAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGA 580
Query: 555 MVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPEN 614
MVD+LGRAG+L +A +FI + V+P V+GA+LGAC IHK+ N A A+E+LFEL+P++
Sbjct: 581 MVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDD 640
Query: 615 VGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQS 674
GYHVLL+NIY A + + VR + ++ L K PGC+++E+ H F SG HP S
Sbjct: 641 GGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDS 700
Query: 675 TAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTE 734
IYA LEKL ++EAG+ +T L VE + KE ++ HSEKLAI+FGL+ T GT
Sbjct: 701 KKIYAFLEKLICHIKEAGYVPDTNLVL-GVENDVKEQLLSTHSEKLAISFGLLNTTAGTT 759
Query: 735 IRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
I + KNLRVC DCH ATK+IS VTGR IVVRD RFHHFK G CSCGDYW
Sbjct: 760 IHVRKNLRVCADCHNATKYISLVTGREIVVRDMQRFHHFKNGACSCGDYW 809
>sp|O81767|PP348_ARATH Pentatricopeptide repeat-containing protein At4g33990
OS=Arabidopsis thaliana GN=EMB2758 PE=3 SV=2
Length = 823
Score = 544 bits (1401), Expect = e-153, Method: Compositional matrix adjust.
Identities = 282/758 (37%), Positives = 443/758 (58%), Gaps = 10/758 (1%)
Query: 29 HAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNEMP 88
HA++++ ++ KL + AR F I D++ +N++I G+
Sbjct: 74 HARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNS 133
Query: 89 KSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAA 148
I ++ ++ LTPD T+ VL A D G +H A+ G+ D++V A+
Sbjct: 134 SEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVID---GNKIHCLALKFGFMWDVYVAAS 190
Query: 149 LVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWL 208
L+ LY ++ V +AR +FD+MP +D WN+MISG ++ ++++ + NG +
Sbjct: 191 LIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEAL-----TLSNGLRAM 245
Query: 209 DSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLF 268
DS +V ++L A E + G+ I +K G ++V L+ Y++ G + + +F
Sbjct: 246 DSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVF 305
Query: 269 RDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLH 328
+ DLIS N++I Y N + ++ LF+++ S + + T++ L + G +
Sbjct: 306 DRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIR 365
Query: 329 LTNCIHSFCLKSG-IVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGY 387
+ F L+ G + + ++ A+ +Y++L +++AR +F+ + SWN +I+GY
Sbjct: 366 ACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGY 425
Query: 388 TQNGLTEEAISLFQEMQAS-KVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESN 446
QNG EAI ++ M+ ++A N T S+L AC+Q GA+ G +H + +
Sbjct: 426 AQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLD 485
Query: 447 IYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLH 506
++V T+L DMY KCG + +A LF + + V WNT+I+ +G HGHG +A+ LF EML
Sbjct: 486 VFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLD 545
Query: 507 SGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLE 566
G++P +TF+++L ACSH+GLV EG F+ M D+G P +HY CMVD+ GRAGQLE
Sbjct: 546 EGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLE 605
Query: 567 KALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYS 626
AL+FIK ++++P ++WGALL AC +H + +L ++ASE LFE++PE+VGYHVLLSN+Y+
Sbjct: 606 TALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYA 665
Query: 627 AERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNG 686
+ + +R + + L K PG + +EV VF +G+Q HP +Y L L
Sbjct: 666 SAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALQA 725
Query: 687 KMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLD 746
K++ G+ + L DVE++EKE ++ HSE+LAIAF LIAT T IRI KNLRVC D
Sbjct: 726 KLKMIGYVPDHRFVLQDVEDDEKEHILMSHSERLAIAFALIATPAKTTIRIFKNLRVCGD 785
Query: 747 CHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
CH+ TKFISK+T R I+VRD+NRFHHFK GVCSCGDYW
Sbjct: 786 CHSVTKFISKITEREIIVRDSNRFHHFKNGVCSCGDYW 823
Score = 217 bits (553), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 158/507 (31%), Positives = 253/507 (49%), Gaps = 15/507 (2%)
Query: 121 CCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSM 180
C + LH +VS ++ + A LV+LY V AR FD + +D WN M
Sbjct: 64 CTNLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLM 123
Query: 181 ISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLG 240
ISG + + I F + + G D + +VL A V + G +I CL LK G
Sbjct: 124 ISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVID---GNKIHCLALKFG 180
Query: 241 FHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFR 300
F VYV L+ YS+ V A +LF ++ D+ S NAMISGY +G + +L L
Sbjct: 181 FMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSN 240
Query: 301 QLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLN 360
L A ++S T+V L+ G + IHS+ +K G+ S V L +Y+
Sbjct: 241 GLRA----MDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFG 296
Query: 361 EMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILS 420
+ +K+FD + L SWN++I Y N AISLFQEM+ S++ P+ +T+ S+ S
Sbjct: 297 RLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLAS 356
Query: 421 ACAQLGAISLGKWVHELVKSRN-FESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEV 479
+QLG I + V + F +I + A++ MYAK G + AR +F+ + + +
Sbjct: 357 ILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVI 416
Query: 480 TWNTMISGYGLHGHGLEALQLFSEMLHSG-IRPSGVTFLSVLYACSHAGLVREGDEIFQS 538
+WNT+ISGY +G EA+++++ M G I + T++SVL ACS AG +R+G ++
Sbjct: 417 SWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGR 476
Query: 539 MIHDHGFKPLAEHYACMVDILGRAGQLEKALE-FIKGLAVEPGPAVWGALLGACMIHKDT 597
++ + G + D+ G+ G+LE AL F + V P W L+ H
Sbjct: 477 LLKN-GLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVP--WNTLIACHGFHGHG 533
Query: 598 NLARVASEKLFE--LDPENVGYHVLLS 622
A + +++ + + P+++ + LLS
Sbjct: 534 EKAVMLFKEMLDEGVKPDHITFVTLLS 560
Score = 205 bits (522), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 156/549 (28%), Positives = 272/549 (49%), Gaps = 19/549 (3%)
Query: 5 TPQSRNLFLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALF 64
TP R F S+LK +T + H + GF D+ L H S +KA AR LF
Sbjct: 150 TPDYRT-FPSVLKACRTVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILF 208
Query: 65 FSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDR 124
+P D+ +N +I G+ + K ++ LR D+ T +LSA + D
Sbjct: 209 DEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLR-----AMDSVTVVSLLSACTEAGDF 263
Query: 125 SIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGL 184
+ GV +H ++I G S+LFV L+DLY +F ++ +KVFD+M +D + WNS+I
Sbjct: 264 NRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAY 323
Query: 185 MKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLG-FHD 243
N +I +F +M R D ++ ++ ++++ ++R +Q L+ G F +
Sbjct: 324 ELNEQPLRAISLFQEM-RLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLE 382
Query: 244 HVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLL 303
+ + +V Y+K G V+ A +F + D+IS N +ISGY NG ++ ++ +
Sbjct: 383 DITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIME 442
Query: 304 ASAE-RVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEM 362
E N T V ++P G L +H LK+G+ + V+T+L+ +Y + +
Sbjct: 443 EEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRL 502
Query: 363 EAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSAC 422
E A LF + + WN +IA + +G E+A+ LF+EM V P+ +T ++LSAC
Sbjct: 503 EDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSAC 562
Query: 423 AQLGAISLGKWVHELVKSR-NFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVT- 480
+ G + G+W E++++ ++ ++DMY + G + A + MS + + +
Sbjct: 563 SHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASI 622
Query: 481 WNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTF---LSVLYACSHAGLVREGDEIFQ 537
W ++S +HG+ ++ ++ SE L + P V + LS +YA AG DEI +
Sbjct: 623 WGALLSACRVHGN-VDLGKIASEHLFE-VEPEHVGYHVLLSNMYA--SAGKWEGVDEI-R 677
Query: 538 SMIHDHGFK 546
S+ H G +
Sbjct: 678 SIAHGKGLR 686
>sp|Q9LUJ2|PP249_ARATH Pentatricopeptide repeat-containing protein At3g22690
OS=Arabidopsis thaliana GN=PCMP-H56 PE=2 SV=1
Length = 842
Score = 528 bits (1361), Expect = e-149, Method: Compositional matrix adjust.
Identities = 283/807 (35%), Positives = 456/807 (56%), Gaps = 37/807 (4%)
Query: 14 SLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHR---LSDFKATCYARALF-FSIPK 69
S LK KT +L H + G ND+ST+TKL R L ++ +A+ +F S
Sbjct: 37 SSLKNCKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESY 96
Query: 70 PDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVL 129
F++N +IRG++++ + +I + + N+ ++PD +T+ F LSA + + G+
Sbjct: 97 GTCFMYNSLIRGYASSGLCNEAILLFLRM-MNSGISPDKYTFPFGLSACAKSRAKGNGIQ 155
Query: 130 LHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCC 189
+HG + GY DLFV +LV Y + + SARKVFD+M E++ V W SMI G +
Sbjct: 156 IHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDF 215
Query: 190 FQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLT 249
+D++ +F MVR+ +S ++ V+ A A++++L G ++ G + +++
Sbjct: 216 AKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVS 275
Query: 250 GLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERV 309
LV Y KC ++ A+ LF + +L CNAM S Y G T +L +F ++ S R
Sbjct: 276 ALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRP 335
Query: 310 NSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLF 369
+ +++ I ++ H + L++G S ++ AL +Y + + + A ++F
Sbjct: 336 DRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIF 395
Query: 370 DESSEKSLASWNAMIAGYTQNG-------------------------------LTEEAIS 398
D S K++ +WN+++AGY +NG L EEAI
Sbjct: 396 DRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIE 455
Query: 399 LFQEMQASK-VAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMY 457
+F MQ+ + V + VT+ SI SAC LGA+ L KW++ ++ + ++ + T L+DM+
Sbjct: 456 VFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMF 515
Query: 458 AKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFL 517
++CG+ A +F+ ++++ W I + G+ A++LF +M+ G++P GV F+
Sbjct: 516 SRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFV 575
Query: 518 SVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAV 577
L ACSH GLV++G EIF SM+ HG P HY CMVD+LGRAG LE+A++ I+ + +
Sbjct: 576 GALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPM 635
Query: 578 EPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATV 637
EP +W +LL AC + + +A A+EK+ L PE G +VLLSN+Y++ + A V
Sbjct: 636 EPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKV 695
Query: 638 RQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTET 697
R +K++ L K PG + I++ G H FTSGD+ HP+ I AML++++ + G +
Sbjct: 696 RLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHLGHVPDL 755
Query: 698 VTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKV 757
L DV+E+EK M+ HSEKLA+A+GLI++ GT IRI+KNLRVC DCH+ KF SKV
Sbjct: 756 SNVLMDVDEKEKIFMLSRHSEKLAMAYGLISSNKGTTIRIVKNLRVCSDCHSFAKFASKV 815
Query: 758 TGRVIVVRDANRFHHFKGGVCSCGDYW 784
R I++RD NRFH+ + G CSCGD+W
Sbjct: 816 YNREIILRDNNRFHYIRQGKCSCGDFW 842
Score = 137 bits (346), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 108/515 (20%), Positives = 233/515 (45%), Gaps = 35/515 (6%)
Query: 13 LSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDL 72
LS ++ + Q H I+ G+ DL L H ++ AR +F + + ++
Sbjct: 141 LSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNV 200
Query: 73 FLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHG 132
+ +I G++ + K ++ + + ++ +TP++ T V+SA + D G ++
Sbjct: 201 VSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYA 260
Query: 133 HAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQD 192
SG + + +ALVD+Y K + + A+++FD+ + L N+M S ++ ++
Sbjct: 261 FIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTRE 320
Query: 193 SIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLV 252
++ VF +++ + G D S+ + + + ++++ + G L+ GF + L+
Sbjct: 321 ALGVF-NLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALI 379
Query: 253 SFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQL---------- 302
Y KC + A +F + +++ N++++GY NG+ +++ F +
Sbjct: 380 DMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNT 439
Query: 303 --------------------LASAERVNSS--TIVGLIPVFYPFGHLHLTNCIHSFCLKS 340
+ S E VN+ T++ + G L L I+ + K+
Sbjct: 440 IISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKN 499
Query: 341 GIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLF 400
GI + + T L ++SR + E+A +F+ + + +++W A I G E AI LF
Sbjct: 500 GIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELF 559
Query: 401 QEMQASKVAPNPVTVSSILSACAQLGAISLGKWV-HELVKSRNFESNIYVSTALIDMYAK 459
+M + P+ V L+AC+ G + GK + + ++K ++D+ +
Sbjct: 560 DDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGR 619
Query: 460 CGNIVEARELF-DLMSHKSEVTWNTMISGYGLHGH 493
G + EA +L D+ ++V WN++++ + G+
Sbjct: 620 AGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGN 654
>sp|Q9ZUW3|PP172_ARATH Pentatricopeptide repeat-containing protein At2g27610
OS=Arabidopsis thaliana GN=PCMP-H60 PE=2 SV=1
Length = 868
Score = 525 bits (1352), Expect = e-148, Method: Compositional matrix adjust.
Identities = 292/767 (38%), Positives = 438/767 (57%), Gaps = 21/767 (2%)
Query: 27 QTHAQIIIHGFQNDLSTVTKLAH---RLSDFKATCYARALFFSIPKPDLFLFNVIIRGFS 83
Q H Q I GF +D+S T L + S+FK R +F + + ++ + +I G++
Sbjct: 114 QLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKD---GRKVFDEMKERNVVTWTTLISGYA 170
Query: 84 NNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDL 143
N M + + + +N P++FT++ L + G+ +H + +G +
Sbjct: 171 RNSMNDEVLTLFMRM-QNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTI 229
Query: 144 FVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRN 203
V +L++LY K V+ AR +FDK K V WNSMISG N +++ +F M R
Sbjct: 230 PVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSM-RL 288
Query: 204 GGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVER 263
L +S A+V+ A ++ELR ++ C +K GF + T L+ YSKC +
Sbjct: 289 NYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLD 348
Query: 264 AELLFRDI-VRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNS---STIVGLIP 319
A LF++I +++S AMISG+ N E ++ LF ++ R N S I+ +P
Sbjct: 349 ALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALP 408
Query: 320 VFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLAS 379
V P + +H+ +K+ +S+V TAL Y +L ++E A K+F +K + +
Sbjct: 409 VISP-------SEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVA 461
Query: 380 WNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGA-ISLGKWVHELV 438
W+AM+AGY Q G TE AI +F E+ + PN T SSIL+ CA A + GK H
Sbjct: 462 WSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFA 521
Query: 439 KSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEAL 498
+S++ VS+AL+ MYAK GNI A E+F K V+WN+MISGY HG ++AL
Sbjct: 522 IKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKAL 581
Query: 499 QLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDI 558
+F EM ++ GVTF+ V AC+HAGLV EG++ F M+ D P EH +CMVD+
Sbjct: 582 DVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDL 641
Query: 559 LGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYH 618
RAGQLEKA++ I+ + G +W +L AC +HK T L R+A+EK+ + PE+ +
Sbjct: 642 YSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAY 701
Query: 619 VLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIY 678
VLLSN+Y+ D+ + A VR+++ +R + K PG + IEV + F +GD+ HP IY
Sbjct: 702 VLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQIY 761
Query: 679 AMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRII 738
LE L+ ++++ G++ +T L D+++E KE ++ HSE+LAIAFGLIAT G+ + II
Sbjct: 762 MKLEDLSTRLKDLGYEPDTSYVLQDIDDEHKEAVLAQHSERLAIAFGLIATPKGSPLLII 821
Query: 739 KNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKG-GVCSCGDYW 784
KNLRVC DCH K I+K+ R IVVRD+NRFHHF GVCSCGD+W
Sbjct: 822 KNLRVCGDCHLVIKLIAKIEEREIVVRDSNRFHHFSSDGVCSCGDFW 868
Score = 162 bits (409), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 125/455 (27%), Positives = 219/455 (48%), Gaps = 22/455 (4%)
Query: 146 GAALVDLYFKFSWVKSAR-----KVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDM 200
G A V +Y F V S+R +FDK P +D + S++ G ++ Q++ +F ++
Sbjct: 26 GVAQVRIYC-FGTVSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNI 84
Query: 201 VRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGE 260
R G +D + ++VL A + + G ++ C +K GF D V V T LV Y K
Sbjct: 85 HRLG-MEMDCSIFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSN 143
Query: 261 VERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPV 320
+ +F ++ ++++ +ISGY N + L LF ++ + NS T + V
Sbjct: 144 FKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGV 203
Query: 321 FYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASW 380
G +H+ +K+G+ V +L +Y + + AR LFD++ KS+ +W
Sbjct: 204 LAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTW 263
Query: 381 NAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKS 440
N+MI+GY NGL EA+ +F M+ + V + + +S++ CA L + + +H V
Sbjct: 264 NSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVK 323
Query: 441 RNFESNIYVSTALIDMYAKCGNIVEARELF-DLMSHKSEVTWNTMISGYGLHGHGLEALQ 499
F + + TAL+ Y+KC +++A LF ++ + V+W MISG+ + EA+
Sbjct: 324 YGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVD 383
Query: 500 LFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYA----CM 555
LFSEM G+RP+ T+ +L A I S +H K E + +
Sbjct: 384 LFSEMKRKGVRPNEFTYSVILTALP---------VISPSEVHAQVVKTNYERSSTVGTAL 434
Query: 556 VDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGA 590
+D + G++E+A + G+ + W A+L
Sbjct: 435 LDAYVKLGKVEEAAKVFSGID-DKDIVAWSAMLAG 468
>sp|Q9LTV8|PP224_ARATH Pentatricopeptide repeat-containing protein At3g12770
OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1
Length = 694
Score = 522 bits (1344), Expect = e-147, Method: Compositional matrix adjust.
Identities = 265/689 (38%), Positives = 407/689 (59%), Gaps = 8/689 (1%)
Query: 98 LRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFS 157
L N+ + D+F S + SA + I H +V G F+ L+ F
Sbjct: 12 LYTNSGIHSDSFYASLIDSATHKAQLKQI----HARLLVLGLQFSGFLITKLIHASSSFG 67
Query: 158 WVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVL 217
+ AR+VFD +P WN++I G +N FQD++ ++ +M + DS + +L
Sbjct: 68 DITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNM-QLARVSPDSFTFPHLL 126
Query: 218 PAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPD-- 275
A + + L++G + +LGF V+V GL++ Y+KC + A +F + P+
Sbjct: 127 KACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERT 186
Query: 276 LISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHS 335
++S A++S Y NG+ +L +F Q+ + + +V ++ F L IH+
Sbjct: 187 IVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHA 246
Query: 336 FCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEE 395
+K G+ +L +L+T+Y++ ++ A+ LFD+ +L WNAMI+GY +NG E
Sbjct: 247 SVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYARE 306
Query: 396 AISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALID 455
AI +F EM V P+ ++++S +SACAQ+G++ + ++E V ++ ++++S+ALID
Sbjct: 307 AIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALID 366
Query: 456 MYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVT 515
M+AKCG++ AR +FD + V W+ MI GYGLHG EA+ L+ M G+ P+ VT
Sbjct: 367 MFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVT 426
Query: 516 FLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGL 575
FL +L AC+H+G+VREG F M DH P +HYAC++D+LGRAG L++A E IK +
Sbjct: 427 FLGLLMACNHSGMVREGWWFFNRMA-DHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCM 485
Query: 576 AVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAA 635
V+PG VWGALL AC H+ L A+++LF +DP N G++V LSN+Y+A R + + A
Sbjct: 486 PVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVA 545
Query: 636 TVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQT 695
VR +K++ L K GC+ +EV G F GD+ HP+ I +E + +++E GF
Sbjct: 546 EVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKEGGFVA 605
Query: 696 ETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFIS 755
+LHD+ +EE E + HSE++AIA+GLI+T GT +RI KNLR C++CH ATK IS
Sbjct: 606 NKDASLHDLNDEEAEETLCSHSERIAIAYGLISTPQGTPLRITKNLRACVNCHAATKLIS 665
Query: 756 KVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
K+ R IVVRD NRFHHFK GVCSCGDYW
Sbjct: 666 KLVDREIVVRDTNRFHHFKDGVCSCGDYW 694
Score = 248 bits (633), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 157/528 (29%), Positives = 265/528 (50%), Gaps = 18/528 (3%)
Query: 7 QSRNLFLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFS 66
S + + SL+ A ++QL Q HA++++ G Q +TKL H S F +AR +F
Sbjct: 19 HSDSFYASLIDSATHKAQLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDD 78
Query: 67 IPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSI 126
+P+P +F +N IIRG+S N + ++ Y++++ ++PD+FT+ +L A S +
Sbjct: 79 LPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQL-ARVSPDSFTFPHLLKACSGLSHLQM 137
Query: 127 GVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFD--KMPEKDTVLWNSMISGL 184
G +H G+ +D+FV L+ LY K + SAR VF+ +PE+ V W +++S
Sbjct: 138 GRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAY 197
Query: 185 MKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDH 244
+N +++ +F M R D ++ +VL A +Q+L+ G I +K+G
Sbjct: 198 AQNGEPMEALEIFSQM-RKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIE 256
Query: 245 VYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLA 304
+L L + Y+KCG+V A++LF + P+LI NAMISGY NG ++ +F +++
Sbjct: 257 PDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMIN 316
Query: 305 SAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEA 364
R ++ +I I G L ++ + +S + + +AL ++++ +E
Sbjct: 317 KDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEG 376
Query: 365 ARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQ 424
AR +FD + ++ + W+AMI GY +G EAISL++ M+ V PN VT +L AC
Sbjct: 377 ARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNH 436
Query: 425 LGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVT-WNT 483
G + G W + +ID+ + G++ +A E+ M + VT W
Sbjct: 437 SGMVREGWWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGA 496
Query: 484 MISGYGLHGH----GLEALQLFSEMLHSGIRPSGVTF---LSVLYACS 524
++S H H A QLFS I PS LS LYA +
Sbjct: 497 LLSACKKHRHVELGEYAAQQLFS------IDPSNTGHYVQLSNLYAAA 538
>sp|Q9CAY1|PP223_ARATH Putative pentatricopeptide repeat-containing protein At3g11460
OS=Arabidopsis thaliana GN=PCMP-H52 PE=3 SV=1
Length = 623
Score = 516 bits (1328), Expect = e-145, Method: Compositional matrix adjust.
Identities = 260/610 (42%), Positives = 385/610 (63%), Gaps = 9/610 (1%)
Query: 177 WNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLG 236
WN + L F +SI ++ M+R+G + D+ S +L + A + G ++ C
Sbjct: 21 WNVRLRELAYQSLFSESISLYRSMLRSGSS-PDAFSFPFILKSCASLSLPVSGQQLHCHV 79
Query: 237 LKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISC--NAMISGYTCNGKTES 294
K G +VLT L+S Y KCG V A +F + + +S NA+ISGYT N K
Sbjct: 80 TKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTD 139
Query: 295 SLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALST 354
+ +FR++ + V+S T++GL+P+ +L L +H C+K G+ S +VL + T
Sbjct: 140 AAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFIT 199
Query: 355 VYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVT 414
+Y + +EA R+LFDE K L +WNA+I+GY+QNGL + + L+++M++S V P+P T
Sbjct: 200 MYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFT 259
Query: 415 VSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMS 474
+ S+LS+CA LGA +G V +LV+S F N++VS A I MYA+CGN+ +AR +FD+M
Sbjct: 260 LVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMP 319
Query: 475 HKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDE 534
KS V+W MI YG+HG G L LF +M+ GIRP G F+ VL ACSH+GL +G E
Sbjct: 320 VKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLE 379
Query: 535 IFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIH 594
+F++M ++ +P EHY+C+VD+LGRAG+L++A+EFI+ + VEP AVWGALLGAC IH
Sbjct: 380 LFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKIH 439
Query: 595 KDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTL 654
K+ ++A +A K+ E +P N+GY+VL+SNIYS ++ +R ++++R K PG +
Sbjct: 440 KNVDMAELAFAKVIEFEPNNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKPGYSY 499
Query: 655 IEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMK 714
+E G H+F +GD+ H Q+ ++ ML++L + E + EE +
Sbjct: 500 VEHKGRVHLFLAGDRSHEQTEEVHRMLDELETSVMELAGNMDCDRG------EEVSSTTR 553
Query: 715 VHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFK 774
HSE+LAIAFG++ + PGTEI +IKNLRVC DCH K +SK+ R VVRDA+RFH+FK
Sbjct: 554 EHSERLAIAFGILNSIPGTEILVIKNLRVCEDCHVFLKQVSKIVDRQFVVRDASRFHYFK 613
Query: 775 GGVCSCGDYW 784
GVCSC DYW
Sbjct: 614 DGVCSCKDYW 623
Score = 172 bits (437), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 124/476 (26%), Positives = 222/476 (46%), Gaps = 8/476 (1%)
Query: 75 FNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHA 134
+NV +R + + SI Y + ++ + +PD F++ F+L + ++ G LH H
Sbjct: 21 WNVRLRELAYQSLFSESISLYRSMLRSGS-SPDAFSFPFILKSCASLSLPVSGQQLHCHV 79
Query: 135 IVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKD--TVLWNSMISGLMKNCCFQD 192
G ++ FV AL+ +Y K V ARKVF++ P+ +V +N++ISG N D
Sbjct: 80 TKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTD 139
Query: 193 SIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLV 252
+ ++F M + G +DS ++ ++P + L LG + +K G V VL +
Sbjct: 140 AAYMFRRM-KETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFI 198
Query: 253 SFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSS 312
+ Y KCG VE LF ++ LI+ NA+ISGY+ NG L L+ Q+ +S +
Sbjct: 199 TMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPF 258
Query: 313 TIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDES 372
T+V ++ G + + + +G V N V A ++Y+R + AR +FD
Sbjct: 259 TLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIM 318
Query: 373 SEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLG- 431
KSL SW AMI Y +G+ E + LF +M + P+ +LSAC+ G G
Sbjct: 319 PVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGL 378
Query: 432 KWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSE-VTWNTMISGYGL 490
+ + + E + L+D+ + G + EA E + M + + W ++ +
Sbjct: 379 ELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKI 438
Query: 491 HGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFK 546
H + A F++++ P+ + + ++ +EG + M+ + F+
Sbjct: 439 HKNVDMAELAFAKVIE--FEPNNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFR 492
Score = 100 bits (250), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 135/291 (46%), Gaps = 4/291 (1%)
Query: 27 QTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLF--LFNVIIRGFSN 84
Q H + G + + +T L AR +F P+ +N +I G++
Sbjct: 74 QLHCHVTKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTA 133
Query: 85 NEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLF 144
N + + + K T ++ D+ T ++ + +G LHG + G S++
Sbjct: 134 NSKVTDAAYMFRRM-KETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVA 192
Query: 145 VGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNG 204
V + + +Y K V++ R++FD+MP K + WN++ISG +N D + ++ M ++
Sbjct: 193 VLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQM-KSS 251
Query: 205 GTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERA 264
G D ++ +VL + A + ++G E+ L GF +V+V +S Y++CG + +A
Sbjct: 252 GVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKA 311
Query: 265 ELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIV 315
+F + L+S AMI Y +G E L LF ++ R + + V
Sbjct: 312 RAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFV 362
>sp|Q9SN39|PP320_ARATH Pentatricopeptide repeat-containing protein At4g18750,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H45 PE=2
SV=1
Length = 871
Score = 514 bits (1323), Expect = e-144, Method: Compositional matrix adjust.
Identities = 282/785 (35%), Positives = 445/785 (56%), Gaps = 13/785 (1%)
Query: 6 PQSRNLFLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFF 65
P++ L L +K+ + I +GF D + +KL+ ++ A +F
Sbjct: 94 PRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFD 153
Query: 66 SIPKPDLFLFNVIIRGFSNNEMPKS-----SICFYTHLRKNTALTPDNFTYSFVLSAASA 120
+ +N+++ NE+ KS SI + + ++ + D++T+S V + S+
Sbjct: 154 EVKIEKALFWNILM-----NELAKSGDFSGSIGLFKKM-MSSGVEMDSYTFSCVSKSFSS 207
Query: 121 CCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSM 180
G LHG + SG+G VG +LV Y K V SARKVFD+M E+D + WNS+
Sbjct: 208 LRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSI 267
Query: 181 ISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLG 240
I+G + N + + VF M+ +G +D ++ +V A+ + + LG + +G+K
Sbjct: 268 INGYVSNGLAEKGLSVFVQMLVSG-IEIDLATIVSVFAGCADSRLISLGRAVHSIGVKAC 326
Query: 241 FHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFR 300
F L+ YSKCG+++ A+ +FR++ ++S +MI+GY G +++LF
Sbjct: 327 FSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFE 386
Query: 301 QLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLN 360
++ + T+ ++ + L +H + ++ + + V AL +Y++
Sbjct: 387 EMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCG 446
Query: 361 EMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEM-QASKVAPNPVTVSSIL 419
M+ A +F E K + SWN +I GY++N EA+SLF + + + +P+ TV+ +L
Sbjct: 447 SMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVL 506
Query: 420 SACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEV 479
ACA L A G+ +H + + S+ +V+ +L+DMYAKCG ++ A LFD ++ K V
Sbjct: 507 PACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLV 566
Query: 480 TWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSM 539
+W MI+GYG+HG G EA+ LF++M +GI ++F+S+LYACSH+GLV EG F M
Sbjct: 567 SWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIM 626
Query: 540 IHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNL 599
H+ +P EHYAC+VD+L R G L KA FI+ + + P +WGALL C IH D L
Sbjct: 627 RHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKL 686
Query: 600 ARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGG 659
A +EK+FEL+PEN GY+VL++NIY+ + Q +R+ + +R L K PGC+ IE+ G
Sbjct: 687 AEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKG 746
Query: 660 TPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEK 719
++F +GD +P++ I A L K+ +M E G+ T AL D EE EKE + HSEK
Sbjct: 747 RVNIFVAGDSSNPETENIEAFLRKVRARMIEEGYSPLTKYALIDAEEMEKEEALCGHSEK 806
Query: 720 LAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCS 779
LA+A G+I++ G IR+ KNLRVC DCH KF+SK+T R IV+RD+NRFH FK G CS
Sbjct: 807 LAMALGIISSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLRDSNRFHQFKDGHCS 866
Query: 780 CGDYW 784
C +W
Sbjct: 867 CRGFW 871
Score = 63.5 bits (153), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 80/172 (46%), Gaps = 9/172 (5%)
Query: 374 EKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKW 433
++S+ N + + ++G E A+ L + K +P T+ S+L CA ++ GK
Sbjct: 58 DRSVTDANTQLRRFCESGNLENAVKLL--CVSGKWDIDPRTLCSVLQLCADSKSLKDGKE 115
Query: 434 VHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGH 493
V ++ F + + + L MY CG++ EA +FD + + + WN +++ G
Sbjct: 116 VDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGD 175
Query: 494 GLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGF 545
++ LF +M+ SG+ TF V + S V G+++ HGF
Sbjct: 176 FSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQL-------HGF 220
>sp|O82380|PP175_ARATH Pentatricopeptide repeat-containing protein At2g29760,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H33 PE=2
SV=1
Length = 738
Score = 507 bits (1306), Expect = e-142, Method: Compositional matrix adjust.
Identities = 258/689 (37%), Positives = 400/689 (58%), Gaps = 35/689 (5%)
Query: 131 HGHAIVSGYGSDLFVGAALVDL--YFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNC 188
HGH I +G SD + + L + F+ ++ ARKVFD++P+ ++ WN++I
Sbjct: 50 HGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYASGP 109
Query: 189 CFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVL 248
SIW F DMV + + + ++ A AEV L LG + + +K V+V
Sbjct: 110 DPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVA 169
Query: 249 TGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAER 308
L+ Y CG+++ A +F I D++S N+MI+G+ G + +L LF+++ + +
Sbjct: 170 NSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVK 229
Query: 309 VNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKL 368
+ T+VG++ +L + S+ ++ + N ++ A+ +Y++ +E A++L
Sbjct: 230 ASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRL 289
Query: 369 FDESSEKS-------------------------------LASWNAMIAGYTQNGLTEEAI 397
FD EK + +WNA+I+ Y QNG EA+
Sbjct: 290 FDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEAL 349
Query: 398 SLFQEMQASK-VAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDM 456
+F E+Q K + N +T+ S LSACAQ+GA+ LG+W+H +K N +V++ALI M
Sbjct: 350 IVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHM 409
Query: 457 YAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTF 516
Y+KCG++ ++RE+F+ + + W+ MI G +HG G EA+ +F +M + ++P+GVTF
Sbjct: 410 YSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTF 469
Query: 517 LSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLA 576
+V ACSH GLV E + +F M ++G P +HYAC+VD+LGR+G LEKA++FI+ +
Sbjct: 470 TNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMP 529
Query: 577 VEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAAT 636
+ P +VWGALLGAC IH + NLA +A +L EL+P N G HVLLSNIY+ + +
Sbjct: 530 IPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSE 589
Query: 637 VRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTE 696
+R+ ++ L K PGC+ IE+ G H F SGD HP S +Y L ++ K++ G++ E
Sbjct: 590 LRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVMEKLKSNGYEPE 649
Query: 697 TVTALHDVEEEE-KELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFIS 755
L +EEEE KE + +HSEKLAI +GLI+TE IR+IKNLRVC DCH+ K IS
Sbjct: 650 ISQVLQIIEEEEMKEQSLNLHSEKLAICYGLISTEAPKVIRVIKNLRVCGDCHSVAKLIS 709
Query: 756 KVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
++ R I+VRD RFHHF+ G CSC D+W
Sbjct: 710 QLYDREIIVRDRYRFHHFRNGQCSCNDFW 738
Score = 220 bits (560), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 153/555 (27%), Positives = 269/555 (48%), Gaps = 38/555 (6%)
Query: 5 TPQSRNLFLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKL--AHRLSDFKATCYARA 62
T R+ +SL++ + QL QTH +I G +D + +KL LS F + YAR
Sbjct: 26 TNNERSRHISLIERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARK 85
Query: 63 LFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACC 122
+F IPKP+ F +N +IR +++ P SI + + + P+ +T+ F++ AA+
Sbjct: 86 VFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVS 145
Query: 123 DRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMIS 182
S+G LHG A+ S GSD+FV +L+ YF + SA KVF + EKD V WNSMI+
Sbjct: 146 SLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMIN 205
Query: 183 GLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFH 242
G ++ ++ +F M + ++ VL A A+++ L G ++ + +
Sbjct: 206 GFVQKGSPDKALELFKKM-ESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVN 264
Query: 243 DHVYVLTGLVSFYSKCGEVERAELLF---------------------------RDIV--- 272
++ + ++ Y+KCG +E A+ LF R+++
Sbjct: 265 VNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSM 324
Query: 273 -RPDLISCNAMISGYTCNGKTESSLRLFRQL-LASAERVNSSTIVGLIPVFYPFGHLHLT 330
+ D+++ NA+IS Y NGK +L +F +L L ++N T+V + G L L
Sbjct: 325 PQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELG 384
Query: 331 NCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQN 390
IHS+ K GI N V +AL +YS+ ++E +R++F+ ++ + W+AMI G +
Sbjct: 385 RWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMH 444
Query: 391 GLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWV-HELVKSRNFESNIYV 449
G EA+ +F +MQ + V PN VT +++ AC+ G + + + H++ +
Sbjct: 445 GCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKH 504
Query: 450 STALIDMYAKCGNIVEARELFDLMS-HKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSG 508
++D+ + G + +A + + M S W ++ +H + A + +L
Sbjct: 505 YACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELE 564
Query: 509 IRPSGV-TFLSVLYA 522
R G LS +YA
Sbjct: 565 PRNDGAHVLLSNIYA 579
>sp|Q9LFL5|PP390_ARATH Pentatricopeptide repeat-containing protein At5g16860
OS=Arabidopsis thaliana GN=PCMP-H92 PE=2 SV=1
Length = 850
Score = 504 bits (1299), Expect = e-142, Method: Compositional matrix adjust.
Identities = 289/819 (35%), Positives = 453/819 (55%), Gaps = 61/819 (7%)
Query: 20 KTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKAT---CYARALFFSIPKPD--LFL 74
KT SQ+ H +++ G + T+ +H +S + + +A +L P D ++
Sbjct: 39 KTISQVKLIHQKLLSFG----ILTLNLTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYH 94
Query: 75 FNVIIRGFSNNEMPKSSICFYTH-LRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGH 133
+N +IR + +N ++ C Y L + + TPDN+T+ FV A G H
Sbjct: 95 WNSLIRSYGDNGC--ANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHAL 152
Query: 134 AIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDS 193
++V+G+ S++FVG ALV +Y + + ARKVFD+M D V WNS+I K + +
Sbjct: 153 SLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVA 212
Query: 194 IWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVS 253
+ +F M G D+ ++ VLP A + LG ++ C + +++V LV
Sbjct: 213 LEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVD 272
Query: 254 FYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLF-------------- 299
Y+KCG ++ A +F ++ D++S NAM++GY+ G+ E ++RLF
Sbjct: 273 MYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVT 332
Query: 300 ---------------------RQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCL 338
RQ+L+S + N T++ ++ G L IH + +
Sbjct: 333 WSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAI 392
Query: 339 K-------SGIVSNSSVLTALSTVYSRLNEMEAARKLFDESS--EKSLASWNAMIAGYTQ 389
K +G + V+ L +Y++ +++ AR +FD S E+ + +W MI GY+Q
Sbjct: 393 KYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQ 452
Query: 390 NGLTEEAISLFQEM--QASKVAPNPVTVSSILSACAQLGAISLGKWVHEL-VKSRNFESN 446
+G +A+ L EM + + PN T+S L ACA L A+ +GK +H ++++
Sbjct: 453 HGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVP 512
Query: 447 IYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLH 506
++VS LIDMYAKCG+I +AR +FD M K+EVTW ++++GYG+HG+G EAL +F EM
Sbjct: 513 LFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRR 572
Query: 507 SGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLE 566
G + GVT L VLYACSH+G++ +G E F M G P EHYAC+VD+LGRAG+L
Sbjct: 573 IGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLN 632
Query: 567 KALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYS 626
AL I+ + +EP P VW A L C IH L A+EK+ EL + G + LLSN+Y+
Sbjct: 633 AALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSNLYA 692
Query: 627 AERDYLQAATVRQVVKKRKLAKAPGCTLIE-VGGTPHVFTSGDQLHPQSTAIYAMLEKLN 685
+ +R +++ + + K PGC+ +E + GT F GD+ HP + IY +L
Sbjct: 693 NAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTTTFFV-GDKTHPHAKEIYQVLLDHM 751
Query: 686 GKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCL 745
++++ G+ ET ALHDV++EEK+ ++ HSEKLA+A+G++ T G IRI KNLRVC
Sbjct: 752 QRIKDIGYVPETGFALHDVDDEEKDDLLFEHSEKLALAYGILTTPQGAAIRITKNLRVCG 811
Query: 746 DCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
DCHTA ++S++ I++RD++RFHHFK G CSC YW
Sbjct: 812 DCHTAFTYMSRIIDHDIILRDSSRFHHFKNGSCSCKGYW 850
>sp|Q9LW32|PP258_ARATH Pentatricopeptide repeat-containing protein At3g26782,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H34 PE=2
SV=1
Length = 659
Score = 503 bits (1294), Expect = e-141, Method: Compositional matrix adjust.
Identities = 255/630 (40%), Positives = 384/630 (60%), Gaps = 11/630 (1%)
Query: 165 VFDKMPEK-DTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEV 223
+F++ +K D WNS+I+ L ++ +++ F M R + +S + A + +
Sbjct: 31 LFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSM-RKLSLYPTRSSFPCAIKACSSL 89
Query: 224 QELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMI 283
++ G + G+ ++V + L+ YS CG++E A +F +I + +++S +MI
Sbjct: 90 FDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMI 149
Query: 284 SGYTCNGKTESSLRLFRQLLASAERVNSSTIV---GLIPVFYPFGHLH---LTNCIHSFC 337
GY NG ++ LF+ LL + + + GL+ V + LT IHSF
Sbjct: 150 RGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFV 209
Query: 338 LKSGIVSNSSVLTALSTVYSRLNE--MEAARKLFDESSEKSLASWNAMIAGYTQNGLTEE 395
+K G SV L Y++ E + ARK+FD+ +K S+N++++ Y Q+G++ E
Sbjct: 210 IKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNE 269
Query: 396 AISLFQEMQASKVAP-NPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALI 454
A +F+ + +KV N +T+S++L A + GA+ +GK +H+ V E ++ V T++I
Sbjct: 270 AFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSII 329
Query: 455 DMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGV 514
DMY KCG + AR+ FD M +K+ +W MI+GYG+HGH +AL+LF M+ SG+RP+ +
Sbjct: 330 DMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYI 389
Query: 515 TFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKG 574
TF+SVL ACSHAGL EG F +M G +P EHY CMVD+LGRAG L+KA + I+
Sbjct: 390 TFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQR 449
Query: 575 LAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQA 634
+ ++P +W +LL AC IHK+ LA ++ +LFELD N GY++LLS+IY+ +
Sbjct: 450 MKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDV 509
Query: 635 ATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQ 694
VR ++K R L K PG +L+E+ G HVF GD+ HPQ IY L +LN K+ EAG+
Sbjct: 510 ERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAGYV 569
Query: 695 TETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFI 754
+ T + HDV+EEEKE+ ++VHSEKLAIAFG++ T PG+ + ++KNLRVC DCH K I
Sbjct: 570 SNTSSVCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLRVCSDCHNVIKLI 629
Query: 755 SKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
SK+ R VVRDA RFHHFK G CSCGDYW
Sbjct: 630 SKIVDREFVVRDAKRFHHFKDGGCSCGDYW 659
Score = 188 bits (478), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 126/435 (28%), Positives = 221/435 (50%), Gaps = 11/435 (2%)
Query: 67 IPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSI 126
+ K D+F +N +I + + ++ ++ +RK +L P ++ + A S+ D
Sbjct: 36 VDKTDVFSWNSVIADLARSGDSAEALLAFSSMRK-LSLYPTRSSFPCAIKACSSLFDIFS 94
Query: 127 GVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMK 186
G H A V GY SD+FV +AL+ +Y ++ ARKVFD++P+++ V W SMI G
Sbjct: 95 GKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDL 154
Query: 187 NCCFQDSIWVFGDMV-----RNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGF 241
N D++ +F D++ + +LDS + +V+ A + V L I +K GF
Sbjct: 155 NGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGF 214
Query: 242 HDHVYVLTGLVSFYSKCGE--VERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLF 299
V V L+ Y+K GE V A +F IV D +S N+++S Y +G + + +F
Sbjct: 215 DRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVF 274
Query: 300 RQLLAS-AERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSR 358
R+L+ + N+ T+ ++ G L + CIH ++ G+ + V T++ +Y +
Sbjct: 275 RRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCK 334
Query: 359 LNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSI 418
+E ARK FD K++ SW AMIAGY +G +A+ LF M S V PN +T S+
Sbjct: 335 CGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSV 394
Query: 419 LSACAQLGAISLG-KWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKS 477
L+AC+ G G +W + + E + ++D+ + G + +A +L M K
Sbjct: 395 LAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKP 454
Query: 478 E-VTWNTMISGYGLH 491
+ + W+++++ +H
Sbjct: 455 DSIIWSSLLAACRIH 469
Score = 131 bits (329), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 121/463 (26%), Positives = 202/463 (43%), Gaps = 47/463 (10%)
Query: 27 QTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNE 86
QTH Q + G+Q+D+ + L S AR +F IPK ++ + +IRG+ N
Sbjct: 97 QTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNG 156
Query: 87 MPKSSICFYTHL-----RKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGS 141
++ + L + A+ D+ V+SA S + + +H I G+
Sbjct: 157 NALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDR 216
Query: 142 DLFVGAALVDLYFKFS--WVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGD 199
+ VG L+D Y K V ARK+FD++ +KD V +NS++S ++ ++ VF
Sbjct: 217 GVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRR 276
Query: 200 MVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCG 259
+V+N ++ +++ VL AV+ LR+G I +++G D V V T ++ Y KCG
Sbjct: 277 LVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCG 336
Query: 260 EVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIP 319
VE A F + ++ S AMI+GY +G +L LF ++ S R N T V +
Sbjct: 337 RVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSV-- 394
Query: 320 VFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLAS 379
L C H+ G + N M+ + E L
Sbjct: 395 ---------LAACSHAGLHVEG--------------WRWFNAMKGRFGV-----EPGLEH 426
Query: 380 WNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVK 439
+ M+ + G ++A L Q M K+ P+ + SS+L+AC + L E+
Sbjct: 427 YGCMVDLLGRAGFLQKAYDLIQRM---KMKPDSIIWSSLLAACRIHKNVELA----EISV 479
Query: 440 SRNFE---SNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEV 479
+R FE SN L +YA G + + +M ++ V
Sbjct: 480 ARLFELDSSNCGYYMLLSHIYADAGRWKDVERVRMIMKNRGLV 522
>sp|Q7Y211|PP285_ARATH Pentatricopeptide repeat-containing protein At3g57430,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H81 PE=2
SV=2
Length = 890
Score = 497 bits (1280), Expect = e-139, Method: Compositional matrix adjust.
Identities = 287/801 (35%), Positives = 456/801 (56%), Gaps = 38/801 (4%)
Query: 12 FLSLLKGAKTQSQL---TQTHAQIIIHGFQND----LSTVTKLAHRLSDFKATCYARALF 64
F +LLK + Q HA + G+ D +T+ L + DF A +F
Sbjct: 100 FPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAV---YKVF 156
Query: 65 FSIPKPDLFLFNVIIRGFSNNEMPKSSI-CFYTHLRKNTALTPDNFTYSFVLSAASACCD 123
I + + +N +I + E + ++ F L +N + P +FT ++S +AC +
Sbjct: 157 DRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDEN--VEPSSFT---LVSVVTACSN 211
Query: 124 RSI------GVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLW 177
+ G +H + + G + F+ LV +Y K + S++ + +D V W
Sbjct: 212 LPMPEGLMMGKQVHAYGLRKGELNS-FIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTW 270
Query: 178 NSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGL 237
N+++S L +N +++ +MV G D ++++VLPA + ++ LR G E+ L
Sbjct: 271 NTVLSSLCQNEQLLEALEYLREMVLEG-VEPDEFTISSVLPACSHLEMLRTGKELHAYAL 329
Query: 238 KLG-FHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSL 296
K G ++ +V + LV Y C +V +F + + NAMI+GY+ N + +L
Sbjct: 330 KNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEAL 389
Query: 297 RLFRQLLASAERV-NSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTV 355
LF + SA + NS+T+ G++P G IH F +K G+ + V L +
Sbjct: 390 LLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDM 449
Query: 356 YSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQ---------AS 406
YSRL +++ A ++F + ++ L +WN MI GY + E+A+ L +MQ AS
Sbjct: 450 YSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGAS 509
Query: 407 KVA--PNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIV 464
+V+ PN +T+ +IL +CA L A++ GK +H N +++ V +AL+DMYAKCG +
Sbjct: 510 RVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQ 569
Query: 465 EARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACS 524
+R++FD + K+ +TWN +I YG+HG+G EA+ L M+ G++P+ VTF+SV ACS
Sbjct: 570 MSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACS 629
Query: 525 HAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPA-V 583
H+G+V EG IF M D+G +P ++HYAC+VD+LGRAG++++A + + + + A
Sbjct: 630 HSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGA 689
Query: 584 WGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKK 643
W +LLGA IH + + +A++ L +L+P ++VLL+NIYS+ + +A VR+ +K+
Sbjct: 690 WSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKE 749
Query: 644 RKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHD 703
+ + K PGC+ IE G H F +GD HPQS + LE L +MR+ G+ +T LH+
Sbjct: 750 QGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKEGYVPDTSCVLHN 809
Query: 704 VEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIV 763
VEE+EKE+++ HSEKLAIAFG++ T PGT IR+ KNLRVC DCH ATKFISK+ R I+
Sbjct: 810 VEEDEKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCHLATKFISKIVDREII 869
Query: 764 VRDANRFHHFKGGVCSCGDYW 784
+RD RFH FK G CSCGDYW
Sbjct: 870 LRDVRRFHRFKNGTCSCGDYW 890
Score = 198 bits (503), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 140/512 (27%), Positives = 257/512 (50%), Gaps = 27/512 (5%)
Query: 103 ALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSD-LFVGAALVDLYFKFSWVKS 161
+ PDN+ + +L A + D +G +H H GYG D + V LV+LY K +
Sbjct: 92 GIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGA 151
Query: 162 ARKVFDKMPEKDTVLWNSMISGLMKNCCFQD---SIWVFGDMVRNGGTWLDSTSVAAVLP 218
KVFD++ E++ V WNS+IS L C F+ ++ F M+ + S ++ +V+
Sbjct: 152 VYKVFDRISERNQVSWNSLISSL---CSFEKWEMALEAFRCML-DENVEPSSFTLVSVVT 207
Query: 219 AVAEV---QELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPD 275
A + + + L +G ++ GL+ G + +++ LV+ Y K G++ +++L D
Sbjct: 208 ACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRD 266
Query: 276 LISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHS 335
L++ N ++S N + +L R+++ + TI ++P L +H+
Sbjct: 267 LVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHA 326
Query: 336 FCLKSG-IVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTE 394
+ LK+G + NS V +AL +Y ++ + R++FD ++ + WNAMIAGY+QN +
Sbjct: 327 YALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDK 386
Query: 395 EAISLFQEMQASK-VAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTAL 453
EA+ LF M+ S + N T++ ++ AC + GA S + +H V R + + +V L
Sbjct: 387 EALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTL 446
Query: 454 IDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLH------- 506
+DMY++ G I A +F M + VTWNTMI+GY H +AL L +M +
Sbjct: 447 MDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSK 506
Query: 507 ----SGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRA 562
++P+ +T +++L +C+ + +G EI I ++ +A A +VD+ +
Sbjct: 507 GASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSA-LVDMYAKC 565
Query: 563 GQLEKALEFIKGLAVEPGPAVWGALLGACMIH 594
G L+ + + + + W ++ A +H
Sbjct: 566 GCLQMSRKVFDQIP-QKNVITWNVIIMAYGMH 596
Score = 78.2 bits (191), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 80/155 (51%), Gaps = 1/155 (0%)
Query: 372 SSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLG 431
S +S W ++ ++ L EA+ + +M + P+ ++L A A L + LG
Sbjct: 57 SQSRSPEWWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELG 116
Query: 432 KWVHELVKSRNFE-SNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGL 490
K +H V + ++ V+ L+++Y KCG+ ++FD +S +++V+WN++IS
Sbjct: 117 KQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCS 176
Query: 491 HGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSH 525
AL+ F ML + PS T +SV+ ACS+
Sbjct: 177 FEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSN 211
>sp|P0C899|PP271_ARATH Putative pentatricopeptide repeat-containing protein At3g49142
OS=Arabidopsis thaliana GN=PCMP-H77 PE=3 SV=1
Length = 686
Score = 496 bits (1277), Expect = e-139, Method: Compositional matrix adjust.
Identities = 257/660 (38%), Positives = 385/660 (58%), Gaps = 39/660 (5%)
Query: 130 LHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCC 189
+H I+ + +G L+ Y V SARKVFD++PE++ ++ N MI + N
Sbjct: 61 VHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGF 120
Query: 190 FQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLT 249
+ + + VFG M D + VL A + + +G +I K+G ++V
Sbjct: 121 YGEGVKVFGTMC-GCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGN 179
Query: 250 GLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERV 309
GLVS Y KCG + A L+ ++ R D++S N+++ GY N + + +L + R++ +
Sbjct: 180 GLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISH 239
Query: 310 NSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLF 369
++ T+ L+P VSN+ T + +Y + +F
Sbjct: 240 DAGTMASLLPA----------------------VSNT---TTENVMY--------VKDMF 266
Query: 370 DESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAIS 429
+ +KSL SWN MI Y +N + EA+ L+ M+A P+ V+++S+L AC A+S
Sbjct: 267 FKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALS 326
Query: 430 LGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYG 489
LGK +H ++ + N+ + ALIDMYAKCG + +AR++F+ M + V+W MIS YG
Sbjct: 327 LGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYG 386
Query: 490 LHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLA 549
G G +A+ LFS++ SG+ P + F++ L ACSHAGL+ EG F+ M + P
Sbjct: 387 FSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRL 446
Query: 550 EHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFE 609
EH ACMVD+LGRAG++++A FI+ +++EP VWGALLGAC +H DT++ +A++KLF+
Sbjct: 447 EHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQ 506
Query: 610 LDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQ 669
L PE GY+VLLSNIY+ + + +R ++K + L K PG + +EV H F GD+
Sbjct: 507 LAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDR 566
Query: 670 LHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIAT 729
HPQS IY L+ L KM+E G+ ++ +ALHDVEEE+KE + VHSEKLAI F L+ T
Sbjct: 567 SHPQSDEIYRELDVLVKKMKELGYVPDSESALHDVEEEDKETHLAVHSEKLAIVFALMNT 626
Query: 730 EPGTE-----IRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
+ E IRI KNLR+C DCH A K IS++T R I++RD NRFH F+ GVCSCGDYW
Sbjct: 627 KEEEEDSNNTIRITKNLRICGDCHVAAKLISQITSREIIIRDTNRFHVFRFGVCSCGDYW 686
Score = 116 bits (291), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 129/282 (45%), Gaps = 6/282 (2%)
Query: 313 TIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDES 372
T+ L V + + +HS + + NSS+ L Y+ L ++ +ARK+FDE
Sbjct: 41 TVFLLGQVLDTYPDIRTLRTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEI 100
Query: 373 SEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGK 432
E+++ N MI Y NG E + +F M V P+ T +L AC+ G I +G+
Sbjct: 101 PERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGR 160
Query: 433 WVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHG 492
+H S ++V L+ MY KCG + EAR + D MS + V+WN+++ GY +
Sbjct: 161 KIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQ 220
Query: 493 HGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHY 552
+AL++ EM I T S+L A S+ E + M G K L +
Sbjct: 221 RFDDALEVCREMESVKISHDAGTMASLLPAVSNT--TTENVMYVKDMFFKMGKKSLVS-W 277
Query: 553 ACMVDILGRAGQLEKALEF---IKGLAVEPGPAVWGALLGAC 591
M+ + + +A+E ++ EP ++L AC
Sbjct: 278 NVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPAC 319
>sp|Q9SS60|PP210_ARATH Pentatricopeptide repeat-containing protein At3g03580
OS=Arabidopsis thaliana GN=PCMP-H23 PE=2 SV=1
Length = 882
Score = 491 bits (1264), Expect = e-138, Method: Compositional matrix adjust.
Identities = 284/758 (37%), Positives = 432/758 (56%), Gaps = 4/758 (0%)
Query: 28 THAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNEM 87
+ QI+ GF++DL L S AR +F +P DL +N +I G+S++
Sbjct: 128 VYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGY 187
Query: 88 PKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGA 147
+ ++ Y H KN+ + PD+FT S VL A G LHG A+ SG S + V
Sbjct: 188 YEEALEIY-HELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNN 246
Query: 148 ALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTW 207
LV +Y KF AR+VFD+M +D+V +N+MI G +K ++S+ +F + +
Sbjct: 247 GLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQFKP- 305
Query: 208 LDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELL 267
D +V++VL A +++L L I LK GF V L+ Y+KCG++ A +
Sbjct: 306 -DLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDV 364
Query: 268 FRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHL 327
F + D +S N++ISGY +G +++LF+ ++ E+ + T + LI V L
Sbjct: 365 FNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADL 424
Query: 328 HLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGY 387
+HS +KSGI + SV AL +Y++ E+ + K+F +WN +I+
Sbjct: 425 KFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISAC 484
Query: 388 TQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNI 447
+ G + + +M+ S+V P+ T L CA L A LGK +H + +ES +
Sbjct: 485 VRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESEL 544
Query: 448 YVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHS 507
+ ALI+MY+KCG + + +F+ MS + VTW MI YG++G G +AL+ F++M S
Sbjct: 545 QIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKS 604
Query: 508 GIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEK 567
GI P V F++++YACSH+GLV EG F+ M + P+ EHYAC+VD+L R+ ++ K
Sbjct: 605 GIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISK 664
Query: 568 ALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSA 627
A EFI+ + ++P ++W ++L AC D A S ++ EL+P++ GY +L SN Y+A
Sbjct: 665 AEEFIQAMPIKPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILASNAYAA 724
Query: 628 ERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGK 687
R + + + +R+ +K + + K PG + IEVG HVF+SGD PQS AIY LE L
Sbjct: 725 LRKWDKVSLIRKSLKDKHITKNPGYSWIEVGKNVHVFSSGDDSAPQSEAIYKSLEILYSL 784
Query: 688 MREAGFQTETVTALHDV-EEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLD 746
M + G+ + ++ EEEEK ++ HSE+LAIAFGL+ TEPGT ++++KNLRVC D
Sbjct: 785 MAKEGYIPDPREVSQNLEEEEEKRRLICGHSERLAIAFGLLNTEPGTPLQVMKNLRVCGD 844
Query: 747 CHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
CH TK ISK+ GR I+VRDANRFH FK G CSC D W
Sbjct: 845 CHEVTKLISKIVGREILVRDANRFHLFKDGTCSCKDRW 882
Score = 251 bits (642), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 174/570 (30%), Positives = 293/570 (51%), Gaps = 11/570 (1%)
Query: 3 MKTPQSRNLFLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARA 62
M+T S L + ++L + HA +I G + KL + S F+ + +
Sbjct: 1 MQTRVSSPFISRALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLS 60
Query: 63 LFFSI-PKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASAC 121
+F + P +++L+N IIR FS N + ++ FY LR+ + ++PD +T+ V+ A +
Sbjct: 61 VFRRVSPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRE-SKVSPDKYTFPSVIKACAGL 119
Query: 122 CDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMI 181
D +G L++ + G+ SDLFVG ALVD+Y + + AR+VFD+MP +D V WNS+I
Sbjct: 120 FDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLI 179
Query: 182 SGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGF 241
SG + +++++ ++ ++ +N DS +V++VLPA + ++ G + LK G
Sbjct: 180 SGYSSHGYYEEALEIYHEL-KNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGV 238
Query: 242 HDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQ 301
+ V V GLV+ Y K A +F ++ D +S N MI GY E S+R+F +
Sbjct: 239 NSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLE 298
Query: 302 LLASAERVNSSTIVGLIPVFYPFGHLH---LTNCIHSFCLKSGIVSNSSVLTALSTVYSR 358
L + ++ + V GHL L I+++ LK+G V S+V L VY++
Sbjct: 299 NLDQFK----PDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAK 354
Query: 359 LNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSI 418
+M AR +F+ K SWN++I+GY Q+G EA+ LF+ M + + +T +
Sbjct: 355 CGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLML 414
Query: 419 LSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSE 478
+S +L + GK +H ++ VS ALIDMYAKCG + ++ ++F M
Sbjct: 415 ISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDT 474
Query: 479 VTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQS 538
VTWNT+IS G LQ+ ++M S + P TFL L C+ R G EI
Sbjct: 475 VTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCC 534
Query: 539 MIHDHGFKPLAEHYACMVDILGRAGQLEKA 568
++ G++ + ++++ + G LE +
Sbjct: 535 LLR-FGYESELQIGNALIEMYSKCGCLENS 563
Score = 128 bits (321), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 101/372 (27%), Positives = 175/372 (47%), Gaps = 8/372 (2%)
Query: 206 TWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAE 265
T + S ++ L + + + ELR I L + LG + L+ YS E +
Sbjct: 3 TRVSSPFISRALSSSSNLNELR---RIHALVISLGLDSSDFFSGKLIDKYSHFREPASSL 59
Query: 266 LLFRDIVRP--DLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYP 323
+FR V P ++ N++I ++ NG +L + +L S + T +I
Sbjct: 60 SVFRR-VSPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAG 118
Query: 324 FGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAM 383
+ + ++ L G S+ V AL +YSR+ + AR++FDE + L SWN++
Sbjct: 119 LFDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSL 178
Query: 384 IAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNF 443
I+GY+ +G EEA+ ++ E++ S + P+ TVSS+L A L + G+ +H
Sbjct: 179 ISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGV 238
Query: 444 ESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSE 503
S + V+ L+ MY K +AR +FD M + V++NTMI GY E++++F E
Sbjct: 239 NSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLE 298
Query: 504 MLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAG 563
L +P +T SVL AC H + I+ M+ GF + ++D+ + G
Sbjct: 299 NLDQ-FKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLK-AGFVLESTVRNILIDVYAKCG 356
Query: 564 QLEKALEFIKGL 575
+ A + +
Sbjct: 357 DMITARDVFNSM 368
>sp|Q9SY02|PP301_ARATH Pentatricopeptide repeat-containing protein At4g02750
OS=Arabidopsis thaliana GN=PCMP-H24 PE=3 SV=1
Length = 781
Score = 478 bits (1230), Expect = e-134, Method: Compositional matrix adjust.
Identities = 260/726 (35%), Positives = 408/726 (56%), Gaps = 59/726 (8%)
Query: 60 ARALFFSIPKPDLFLFNVIIRGF-SNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAA 118
AR LF +P+ DL +NV+I+G+ N + K+ F + P+ S+
Sbjct: 114 ARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELF--------EIMPERDVCSW----- 160
Query: 119 SACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWN 178
+ ++SGY + V AR VFD+MPEK+ V WN
Sbjct: 161 --------------NTMLSGYAQN--------------GCVDDARSVFDRMPEKNDVSWN 192
Query: 179 SMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLK 238
+++S ++N +++ +F ++ W S +L + +++ +E +
Sbjct: 193 ALLSAYVQNSKMEEACMLF----KSRENWA-LVSWNCLLGGFVKKKKI---VEARQFFDS 244
Query: 239 LGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRL 298
+ D V +++ Y++ G+++ A LF + D+ + AM+SGY N E + L
Sbjct: 245 MNVRD-VVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEAREL 303
Query: 299 FRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSR 358
F ++ E ++ + G + L + + N S + T Y++
Sbjct: 304 FDKMPERNEVSWNAMLAGYVQGERMEMAKELFDVMP--------CRNVSTWNTMITGYAQ 355
Query: 359 LNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSI 418
++ A+ LFD+ ++ SW AMIAGY+Q+G + EA+ LF +M+ N + SS
Sbjct: 356 CGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSA 415
Query: 419 LSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSE 478
LS CA + A+ LGK +H + +E+ +V AL+ MY KCG+I EA +LF M+ K
Sbjct: 416 LSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDI 475
Query: 479 VTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQS 538
V+WNTMI+GY HG G AL+ F M G++P T ++VL ACSH GLV +G + F +
Sbjct: 476 VSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYT 535
Query: 539 MIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTN 598
M D+G P ++HYACMVD+LGRAG LE A +K + EP A+WG LLGA +H +T
Sbjct: 536 MTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTE 595
Query: 599 LARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVG 658
LA A++K+F ++PEN G +VLLSN+Y++ + +R ++ + + K PG + IE+
Sbjct: 596 LAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQ 655
Query: 659 GTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSE 718
H F+ GD+ HP+ I+A LE+L+ +M++AG+ ++T LHDVEEEEKE M++ HSE
Sbjct: 656 NKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAGYVSKTSVVLHDVEEEEKERMVRYHSE 715
Query: 719 KLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVC 778
+LA+A+G++ G IR+IKNLRVC DCH A K+++++TGR+I++RD NRFHHFK G C
Sbjct: 716 RLAVAYGIMRVSSGRPIRVIKNLRVCEDCHNAIKYMARITGRLIILRDNNRFHHFKDGSC 775
Query: 779 SCGDYW 784
SCGDYW
Sbjct: 776 SCGDYW 781
Score = 102 bits (253), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/266 (30%), Positives = 128/266 (48%), Gaps = 22/266 (8%)
Query: 275 DLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIH 334
D+ N IS Y G+ +LR+F+++ R +S + G+I + G L +
Sbjct: 63 DIKEWNVAISSYMRTGRCNEALRVFKRM----PRWSSVSYNGMISGYLRNGEFELARKLF 118
Query: 335 SFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTE 394
+ +VS + ++ Y R + AR+LF+ E+ + SWN M++GY QNG +
Sbjct: 119 DEMPERDLVSWNVMIKG----YVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVD 174
Query: 395 EAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVS-TAL 453
+A S+F M N V+ +++LSA Q + L KSR E+ VS L
Sbjct: 175 DARSVFDRMPEK----NDVSWNALLSAYVQNSKMEE---ACMLFKSR--ENWALVSWNCL 225
Query: 454 IDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSG 513
+ + K IVEAR+ FD M+ + V+WNT+I+GY G EA QLF E +
Sbjct: 226 LGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDV---- 281
Query: 514 VTFLSVLYACSHAGLVREGDEIFQSM 539
T+ +++ +V E E+F M
Sbjct: 282 FTWTAMVSGYIQNRMVEEARELFDKM 307
Score = 60.5 bits (145), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 65/131 (49%), Gaps = 8/131 (6%)
Query: 374 EKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKW 433
+ + WN I+ Y + G EA+ +F+ M + V+ + ++S + G L +
Sbjct: 61 DSDIKEWNVAISSYMRTGRCNEALRVFKRMPRW----SSVSYNGMISGYLRNGEFELARK 116
Query: 434 VHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGH 493
+ + + R+ S +I Y + N+ +ARELF++M + +WNTM+SGY +G
Sbjct: 117 LFDEMPERDLVS----WNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGC 172
Query: 494 GLEALQLFSEM 504
+A +F M
Sbjct: 173 VDDARSVFDRM 183
>sp|Q9LW63|PP251_ARATH Putative pentatricopeptide repeat-containing protein At3g23330
OS=Arabidopsis thaliana GN=PCMP-H32 PE=3 SV=1
Length = 715
Score = 478 bits (1229), Expect = e-133, Method: Compositional matrix adjust.
Identities = 244/655 (37%), Positives = 374/655 (57%), Gaps = 37/655 (5%)
Query: 166 FDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQE 225
F + + W S+I F ++ F +M R G D +VL + + +
Sbjct: 62 FKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEM-RASGRCPDHNVFPSVLKSCTMMMD 120
Query: 226 LRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSK-----------------------CGE-- 260
LR G + ++LG +Y L++ Y+K G+
Sbjct: 121 LRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDED 180
Query: 261 -----------VERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERV 309
++ +F + R D++S N +I+GY +G E +LR+ R++ + +
Sbjct: 181 VKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKP 240
Query: 310 NSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLF 369
+S T+ ++P+F + + IH + ++ GI S+ + ++L +Y++ +E + ++F
Sbjct: 241 DSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVF 300
Query: 370 DESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAIS 429
+ SWN+++AGY QNG EA+ LF++M +KV P V SS++ ACA L +
Sbjct: 301 SRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLH 360
Query: 430 LGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYG 489
LGK +H V F SNI++++AL+DMY+KCGNI AR++FD M+ EV+W +I G+
Sbjct: 361 LGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHA 420
Query: 490 LHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLA 549
LHGHG EA+ LF EM G++P+ V F++VL ACSH GLV E F SM +G
Sbjct: 421 LHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQEL 480
Query: 550 EHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFE 609
EHYA + D+LGRAG+LE+A FI + VEP +VW LL +C +HK+ LA +EK+F
Sbjct: 481 EHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFT 540
Query: 610 LDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQ 669
+D EN+G +VL+ N+Y++ + + A +R ++K+ L K P C+ IE+ H F SGD+
Sbjct: 541 VDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDR 600
Query: 670 LHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIAT 729
HP I L+ + +M + G+ +T LHDV+EE K ++ HSE+LA+AFG+I T
Sbjct: 601 SHPSMDKINEFLKAVMEQMEKEGYVADTSGVLHDVDEEHKRELLFGHSERLAVAFGIINT 660
Query: 730 EPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
EPGT IR+ KN+R+C DCH A KFISK+T R I+VRD +RFHHF G CSCGDYW
Sbjct: 661 EPGTTIRVTKNIRICTDCHVAIKFISKITEREIIVRDNSRFHHFNRGNCSCGDYW 715
Score = 202 bits (513), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 140/536 (26%), Positives = 248/536 (46%), Gaps = 66/536 (12%)
Query: 8 SRNLFLSLLKGA---KTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARAL- 63
S+ L +L+K K++SQ Q HAQ I L+H + + Y
Sbjct: 4 SKALIKTLIKNPTRIKSKSQAKQLHAQFI---------RTQSLSHTSASIVISIYTNLKL 54
Query: 64 -------FFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLS 116
F ++ P + + +IR F++ + ++ + +R + PD+ + VL
Sbjct: 55 LHEALLLFKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRA-SGRCPDHNVFPSVLK 113
Query: 117 AASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKF-------------------- 156
+ + D G +HG + G DL+ G AL+++Y K
Sbjct: 114 SCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRT 173
Query: 157 ----------------SWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDM 200
+ S R+VF+ MP KD V +N++I+G ++ ++D++ M
Sbjct: 174 SNSGDEDVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDAL----RM 229
Query: 201 VRNGGTW---LDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSK 257
VR GT DS ++++VLP +E ++ G EI ++ G VY+ + LV Y+K
Sbjct: 230 VREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAK 289
Query: 258 CGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGL 317
+E +E +F + D IS N++++GY NG+ +LRLFRQ++ + + + +
Sbjct: 290 SARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSV 349
Query: 318 IPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSL 377
IP LHL +H + L+ G SN + +AL +YS+ ++AARK+FD +
Sbjct: 350 IPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDE 409
Query: 378 ASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLG-KWVHE 436
SW A+I G+ +G EA+SLF+EM+ V PN V ++L+AC+ +G + + +
Sbjct: 410 VSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNS 469
Query: 437 LVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMS-HKSEVTWNTMISGYGLH 491
+ K + A+ D+ + G + EA M + W+T++S +H
Sbjct: 470 MTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVH 525
>sp|Q9LN01|PPR21_ARATH Pentatricopeptide repeat-containing protein At1g08070
OS=Arabidopsis thaliana GN=PCMP-H12 PE=2 SV=1
Length = 741
Score = 469 bits (1208), Expect = e-131, Method: Compositional matrix adjust.
Identities = 260/692 (37%), Positives = 392/692 (56%), Gaps = 37/692 (5%)
Query: 129 LLHGHAIVSGYGSDLFVGAALVD---LYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLM 185
++H I G + + + L++ L F + A VF + E + ++WN+M G
Sbjct: 51 IIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGHA 110
Query: 186 KNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHV 245
+ ++ ++ M+ + G +S + VL + A+ + + G +I LKLG +
Sbjct: 111 LSSDPVSALKLYVCMI-SLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDL 169
Query: 246 YVLTGLVSFYSKCGE-------------------------------VERAELLFRDIVRP 274
YV T L+S Y + G +E A+ LF +I
Sbjct: 170 YVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVK 229
Query: 275 DLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIH 334
D++S NAMISGY G + +L LF+ ++ + R + ST+V ++ G + L +H
Sbjct: 230 DVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVH 289
Query: 335 SFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTE 394
+ G SN ++ AL +YS+ E+E A LF+ K + SWN +I GYT L +
Sbjct: 290 LWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYK 349
Query: 395 EAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSR--NFESNIYVSTA 452
EA+ LFQEM S PN VT+ SIL ACA LGAI +G+W+H + R + + T+
Sbjct: 350 EALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTS 409
Query: 453 LIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPS 512
LIDMYAKCG+I A ++F+ + HKS +WN MI G+ +HG + LFS M GI+P
Sbjct: 410 LIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPD 469
Query: 513 GVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFI 572
+TF+ +L ACSH+G++ G IF++M D+ P EHY CM+D+LG +G ++A E I
Sbjct: 470 DITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMI 529
Query: 573 KGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYL 632
+ +EP +W +LL AC +H + L +E L +++PEN G +VLLSNIY++ +
Sbjct: 530 NMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWN 589
Query: 633 QAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAG 692
+ A R ++ + + K PGC+ IE+ H F GD+ HP++ IY MLE++ + +AG
Sbjct: 590 EVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAG 649
Query: 693 FQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATK 752
F +T L ++EEE KE ++ HSEKLAIAFGLI+T+PGT++ I+KNLRVC +CH ATK
Sbjct: 650 FVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATK 709
Query: 753 FISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
ISK+ R I+ RD RFHHF+ GVCSC DYW
Sbjct: 710 LISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741
Score = 219 bits (558), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 168/609 (27%), Positives = 287/609 (47%), Gaps = 78/609 (12%)
Query: 13 LSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRL---SDFKATCYARALFFSIPK 69
LSLL KT L HAQ+I G N ++KL F+ YA ++F +I +
Sbjct: 37 LSLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQE 96
Query: 70 PDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVL 129
P+L ++N + RG + + P S++ Y + + L P+++T+ FVL + + G
Sbjct: 97 PNLLIWNTMFRGHALSSDPVSALKLYVCM-ISLGLLPNSYTFPFVLKSCAKSKAFKEGQQ 155
Query: 130 LHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDK--------------------- 168
+HGH + G DL+V +L+ +Y + ++ A KVFDK
Sbjct: 156 IHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGY 215
Query: 169 ----------MPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLP 218
+P KD V WN+MISG + +++++ +F DM++ D +++ V+
Sbjct: 216 IENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKT-NVRPDESTMVTVVS 274
Query: 219 AVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLIS 278
A A+ + LG ++ GF ++ ++ L+ YSKCGE+E A LF + D+IS
Sbjct: 275 ACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVIS 334
Query: 279 CNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCL 338
N +I GYT + +L LF+++L S E N T++ ++P G + + IH +
Sbjct: 335 WNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYID 394
Query: 339 K--SGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEA 396
K G+ + SS+ T+L +Y++ ++EAA ++F+ KSL+SWNAMI G+ +G + +
Sbjct: 395 KRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADAS 454
Query: 397 ISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDM 456
LF M+ + P+ +T +LSAC+ G + LG+ + + + Y T ++
Sbjct: 455 FDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTM------TQDYKMTPKLEH 508
Query: 457 YAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTF 516
Y C + DL+ H GL E + + P GV +
Sbjct: 509 YG-C--------MIDLLGHS------------GLFKEAEEMINMMEME------PDGVIW 541
Query: 517 LSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLE-----KALEF 571
S+L AC G V G+ +++I P + Y + +I AG+ +AL
Sbjct: 542 CSLLKACKMHGNVELGESFAENLIKIEPENPGS--YVLLSNIYASAGRWNEVAKTRALLN 599
Query: 572 IKGLAVEPG 580
KG+ PG
Sbjct: 600 DKGMKKVPG 608
>sp|Q9SVP7|PP307_ARATH Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis
thaliana GN=PCMP-H42 PE=2 SV=2
Length = 1064
Score = 462 bits (1190), Expect = e-129, Method: Compositional matrix adjust.
Identities = 265/789 (33%), Positives = 424/789 (53%), Gaps = 16/789 (2%)
Query: 3 MKTPQSRNLFLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARA 62
M TP + + LS K ++ Q H ++ GF +D L A
Sbjct: 285 MPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEH 344
Query: 63 LFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACC 122
+F ++ + D +N +I G S + ++ + + + L PD+ T + ++ A SA
Sbjct: 345 IFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLD-GLEPDSNTLASLVVACSADG 403
Query: 123 DRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMI- 181
G LH + G+ S+ + AL++LY K + +++A F + ++ VLWN M+
Sbjct: 404 TLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLV 463
Query: 182 -SGLMKNCCFQDSIWVFGDM-----VRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCL 235
GL+ + ++S +F M V N T+ ++L + +L LG +I
Sbjct: 464 AYGLLDD--LRNSFRIFRQMQIEEIVPNQYTY------PSILKTCIRLGDLELGEQIHSQ 515
Query: 236 GLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESS 295
+K F + YV + L+ Y+K G+++ A + D++S MI+GYT + +
Sbjct: 516 IIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKA 575
Query: 296 LRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTV 355
L FRQ+L R + + + L IH+ SG S+ AL T+
Sbjct: 576 LTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTL 635
Query: 356 YSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTV 415
YSR ++E + F+++ +WNA+++G+ Q+G EEA+ +F M + N T
Sbjct: 636 YSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTF 695
Query: 416 SSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSH 475
S + A ++ + GK VH ++ ++S V ALI MYAKCG+I +A + F +S
Sbjct: 696 GSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVST 755
Query: 476 KSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEI 535
K+EV+WN +I+ Y HG G EAL F +M+HS +RP+ VT + VL ACSH GLV +G
Sbjct: 756 KNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAY 815
Query: 536 FQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHK 595
F+SM ++G P EHY C+VD+L RAG L +A EFI+ + ++P VW LL AC++HK
Sbjct: 816 FESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHK 875
Query: 596 DTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLI 655
+ + A+ L EL+PE+ +VLLSN+Y+ + + RQ +K++ + K PG + I
Sbjct: 876 NMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWI 935
Query: 656 EVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKV 715
EV + H F GDQ HP + I+ + L + E G+ + + L++++ E+K+ ++ +
Sbjct: 936 EVKNSIHSFYVGDQNHPLADEIHEYFQDLTKRASEIGYVQDCFSLLNELQHEQKDPIIFI 995
Query: 716 HSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKG 775
HSEKLAI+FGL++ I ++KNLRVC DCH KF+SKV+ R I+VRDA RFHHF+G
Sbjct: 996 HSEKLAISFGLLSLPATVPINVMKNLRVCNDCHAWIKFVSKVSNREIIVRDAYRFHHFEG 1055
Query: 776 GVCSCGDYW 784
G CSC DYW
Sbjct: 1056 GACSCKDYW 1064
Score = 220 bits (560), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 153/571 (26%), Positives = 272/571 (47%), Gaps = 6/571 (1%)
Query: 25 LTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSN 84
+ Q HA+I+ G ++ L S AR +F + D + +I G S
Sbjct: 206 VEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSK 265
Query: 85 NEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLF 144
NE +I + + + P + +S VLSA IG LHG + G+ SD +
Sbjct: 266 NECEAEAIRLFCDMYV-LGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTY 324
Query: 145 VGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNG 204
V ALV LYF + SA +F M ++D V +N++I+GL + + ++ +F M +
Sbjct: 325 VCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLD- 383
Query: 205 GTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERA 264
G DS ++A+++ A + L G ++ KLGF + + L++ Y+KC ++E A
Sbjct: 384 GLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETA 443
Query: 265 ELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPF 324
F + +++ N M+ Y +S R+FRQ+ N T ++
Sbjct: 444 LDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRL 503
Query: 325 GHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMI 384
G L L IHS +K+ N+ V + L +Y++L +++ A + + K + SW MI
Sbjct: 504 GDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMI 563
Query: 385 AGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFE 444
AGYTQ ++A++ F++M + + V +++ +SACA L A+ G+ +H F
Sbjct: 564 AGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFS 623
Query: 445 SNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEM 504
S++ AL+ +Y++CG I E+ F+ + WN ++SG+ G+ EAL++F M
Sbjct: 624 SDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRM 683
Query: 505 LHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQ 564
GI + TF S + A S +++G ++ ++I G+ E ++ + + G
Sbjct: 684 NREGIDNNNFTFGSAVKAASETANMKQGKQV-HAVITKTGYDSETEVCNALISMYAKCGS 742
Query: 565 LEKALEFIKGLAVEPGPAV-WGALLGACMIH 594
+ A + + L V V W A++ A H
Sbjct: 743 ISDAEK--QFLEVSTKNEVSWNAIINAYSKH 771
Score = 167 bits (424), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 128/488 (26%), Positives = 220/488 (45%), Gaps = 30/488 (6%)
Query: 100 KNTALTPDNFTYSFVLSAASACCDRSIGVL-----LHGHAIVSGYGSDLFVGAALVDLYF 154
+N + P++ T ++L C ++ G L LH + G S+ + L D Y
Sbjct: 76 ENRGIRPNHQTLKWLLEG----CLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYL 131
Query: 155 KFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVA 214
+ A KVFD+MPE+ WN MI L + +F MV T + T
Sbjct: 132 FKGDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSG 191
Query: 215 AVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRP 274
+ + +I L G D V L+ YS+ G V+ A +F +
Sbjct: 192 VLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLK 251
Query: 275 DLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFG--------- 325
D S AMISG + N ++RLF + ++G++P Y F
Sbjct: 252 DHSSWVAMISGLSKNECEAEAIRLFCDMY----------VLGIMPTPYAFSSVLSACKKI 301
Query: 326 -HLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMI 384
L + +H LK G S++ V AL ++Y L + +A +F S++ ++N +I
Sbjct: 302 ESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLI 361
Query: 385 AGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFE 444
G +Q G E+A+ LF+ M + P+ T++S++ AC+ G + G+ +H F
Sbjct: 362 NGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFA 421
Query: 445 SNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEM 504
SN + AL+++YAKC +I A + F ++ V WN M+ YGL + ++F +M
Sbjct: 422 SNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQM 481
Query: 505 LHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQ 564
I P+ T+ S+L C G + G++I +I + F+ A + ++D+ + G+
Sbjct: 482 QIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTN-FQLNAYVCSVLIDMYAKLGK 540
Query: 565 LEKALEFI 572
L+ A + +
Sbjct: 541 LDTAWDIL 548
Score = 151 bits (382), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 115/427 (26%), Positives = 200/427 (46%), Gaps = 6/427 (1%)
Query: 199 DMVRNGGTWLDSTSVAAVLPAVAEVQ-ELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSK 257
D V N G + ++ +L + L G ++ LKLG + + L FY
Sbjct: 73 DSVENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLF 132
Query: 258 CGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGL 317
G++ A +F ++ + + N MI LF ++++ N T G+
Sbjct: 133 KGDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGV 192
Query: 318 IPVFYPFG-HLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKS 376
+ + IH+ L G+ ++ V L +YSR ++ AR++FD K
Sbjct: 193 LEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKD 252
Query: 377 LASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHE 436
+SW AMI+G ++N EAI LF +M + P P SS+LSAC ++ ++ +G+ +H
Sbjct: 253 HSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHG 312
Query: 437 LVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLE 496
LV F S+ YV AL+ +Y GN++ A +F MS + VT+NT+I+G G+G +
Sbjct: 313 LVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEK 372
Query: 497 ALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMV 556
A++LF M G+ P T S++ ACS G + G ++ + GF + ++
Sbjct: 373 AMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQL-HAYTTKLGFASNNKIEGALL 431
Query: 557 DILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKD-TNLARVASE-KLFELDPEN 614
++ + +E AL++ VE +W +L A + D N R+ + ++ E+ P
Sbjct: 432 NLYAKCADIETALDYFLETEVE-NVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQ 490
Query: 615 VGYHVLL 621
Y +L
Sbjct: 491 YTYPSIL 497
>sp|Q9SZT8|PP354_ARATH Pentatricopeptide repeat-containing protein At4g37380,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H48 PE=3
SV=1
Length = 632
Score = 461 bits (1187), Expect = e-129, Method: Compositional matrix adjust.
Identities = 236/559 (42%), Positives = 341/559 (61%), Gaps = 29/559 (5%)
Query: 255 YSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTI 314
Y+ G++ + LF + PDL A I+ + NG + + L+ QLL+S N T
Sbjct: 74 YASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTF 133
Query: 315 VGLIPVFY----PFGHLHL------------TNCIHSFCLKSGIVSNSSVL--------- 349
L+ H H+ T + + +VS V
Sbjct: 134 SSLLKSCSTKSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLV 193
Query: 350 --TALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQAS- 406
TA+ T Y++ +EAAR LFD E+ + SWN MI GY Q+G +A+ LFQ++ A
Sbjct: 194 SSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEG 253
Query: 407 KVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEA 466
K P+ +TV + LSAC+Q+GA+ G+W+H VKS N+ V T LIDMY+KCG++ EA
Sbjct: 254 KPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEA 313
Query: 467 RELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLH-SGIRPSGVTFLSVLYACSH 525
+F+ K V WN MI+GY +HG+ +AL+LF+EM +G++P+ +TF+ L AC+H
Sbjct: 314 VLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAH 373
Query: 526 AGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWG 585
AGLV EG IF+SM ++G KP EHY C+V +LGRAGQL++A E IK + ++ +W
Sbjct: 374 AGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWS 433
Query: 586 ALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRK 645
++LG+C +H D L + +E L L+ +N G +VLLSNIY++ DY A VR ++K++
Sbjct: 434 SVLGSCKLHGDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVRNLMKEKG 493
Query: 646 LAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVE 705
+ K PG + IE+ H F +GD+ H +S IY ML K++ +++ G+ T T L D+E
Sbjct: 494 IVKEPGISTIEIENKVHEFRAGDREHSKSKEIYTMLRKISERIKSHGYVPNTNTVLQDLE 553
Query: 706 EEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVR 765
E EKE ++VHSE+LAIA+GLI+T+PG+ ++I KNLRVC DCHT TK ISK+TGR IV+R
Sbjct: 554 ETEKEQSLQVHSERLAIAYGLISTKPGSPLKIFKNLRVCSDCHTVTKLISKITGRKIVMR 613
Query: 766 DANRFHHFKGGVCSCGDYW 784
D NRFHHF G CSCGD+W
Sbjct: 614 DRNRFHHFTDGSCSCGDFW 632
Score = 154 bits (390), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 135/500 (27%), Positives = 214/500 (42%), Gaps = 74/500 (14%)
Query: 15 LLKGAKTQSQLTQTHAQIIIHGF--QNDLSTVTKLAHR-LSDFKATCYARALFFSIPKPD 71
L+ +++ ++ Q HA I+ H + HR + ++ ALF PD
Sbjct: 35 LIDKSQSVDEVLQIHAAILRHNLLLHPRYPVLNLKLHRAYASHGKIRHSLALFHQTIDPD 94
Query: 72 LFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLH 131
LFLF I S N + + Y L ++ + P+ FT+S +L + C G L+H
Sbjct: 95 LFLFTAAINTASINGLKDQAFLLYVQLL-SSEINPNEFTFSSLLKS----CSTKSGKLIH 149
Query: 132 GHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMP--------------------- 170
H + G G D +V LVD+Y K V SA+KVFD+MP
Sbjct: 150 THVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVE 209
Query: 171 ----------EKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAV 220
E+D V WN MI G ++ D++ +F ++ G D +V A L A
Sbjct: 210 AARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSAC 269
Query: 221 AEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCN 280
+++ L G I +V V TGL+ YSKCG +E A L+F D R D+++ N
Sbjct: 270 SQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWN 329
Query: 281 AMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKS 340
AMI+GY +G ++ +LRLF ++ I GL P F L C H+ +
Sbjct: 330 AMIAGYAMHGYSQDALRLFNEM---------QGITGLQPTDITFIGT-LQACAHAGLVNE 379
Query: 341 GIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLF 400
GI + ++ Y ++E + +++ + G + A
Sbjct: 380 GI----RIFESMGQEYGIKPKIE---------------HYGCLVSLLGRAGQLKRAYETI 420
Query: 401 QEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFE-SNIYVSTALIDMYAK 459
+ M + + V SS+L +C G LGK + E + N + S IYV L ++YA
Sbjct: 421 KNMN---MDADSVLWSSVLGSCKLHGDFVLGKEIAEYLIGLNIKNSGIYV--LLSNIYAS 475
Query: 460 CGNIVEARELFDLMSHKSEV 479
G+ ++ +LM K V
Sbjct: 476 VGDYEGVAKVRNLMKEKGIV 495
Score = 85.1 bits (209), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 125/286 (43%), Gaps = 35/286 (12%)
Query: 12 FLSLLKGAKTQS-QLTQTH--------------AQIIIHGFQNDLSTVTKLAHRL----- 51
F SLLK T+S +L TH + ++ D+ + K+ R+
Sbjct: 133 FSSLLKSCSTKSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSL 192
Query: 52 --SDFKATCYA--------RALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKN 101
S TCYA RALF S+ + D+ +NV+I G++ + P ++ + L
Sbjct: 193 VSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAE 252
Query: 102 TALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKS 161
PD T LSA S G +H S ++ V L+D+Y K ++
Sbjct: 253 GKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEE 312
Query: 162 ARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAV--LPA 219
A VF+ P KD V WN+MI+G + QD++ +F +M G T L T + + L A
Sbjct: 313 AVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEM--QGITGLQPTDITFIGTLQA 370
Query: 220 VAEVQELRLGMEI-QCLGLKLGFHDHVYVLTGLVSFYSKCGEVERA 264
A + G+ I + +G + G + LVS + G+++RA
Sbjct: 371 CAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRA 416
>sp|Q9SR82|PP219_ARATH Putative pentatricopeptide repeat-containing protein At3g08820
OS=Arabidopsis thaliana GN=PCMP-H84 PE=3 SV=1
Length = 685
Score = 461 bits (1187), Expect = e-129, Method: Compositional matrix adjust.
Identities = 249/643 (38%), Positives = 358/643 (55%), Gaps = 1/643 (0%)
Query: 142 DLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMV 201
D F+ L+ F K + +F + L+NS+I+G + N F +++ +F +
Sbjct: 44 DTFLVNLLLKRTLFFRQTKYSYLLFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLS-I 102
Query: 202 RNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEV 261
R G +L + VL A +LG+++ L +K GF+ V +T L+S YS G +
Sbjct: 103 RKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRL 162
Query: 262 ERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVF 321
A LF +I +++ A+ SGYT +G+ ++ LF++++ + +S IV ++
Sbjct: 163 NDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSAC 222
Query: 322 YPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWN 381
G L I + + + NS V T L +Y++ +ME AR +FD EK + +W+
Sbjct: 223 VHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWS 282
Query: 382 AMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSR 441
MI GY N +E I LF +M + P+ ++ LS+CA LGA+ LG+W L+
Sbjct: 283 TMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRH 342
Query: 442 NFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLF 501
F +N++++ ALIDMYAKCG + E+F M K V N ISG +GH + +F
Sbjct: 343 EFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVF 402
Query: 502 SEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGR 561
+ GI P G TFL +L C HAGL+++G F ++ + K EHY CMVD+ GR
Sbjct: 403 GQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGR 462
Query: 562 AGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLL 621
AG L+ A I + + P VWGALL C + KDT LA ++L L+P N G +V L
Sbjct: 463 AGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQL 522
Query: 622 SNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAML 681
SNIYS + +AA VR ++ K+ + K PG + IE+ G H F + D+ HP S IYA L
Sbjct: 523 SNIYSVGGRWDEAAEVRDMMNKKGMKKIPGYSWIELEGKVHEFLADDKSHPLSDKIYAKL 582
Query: 682 EKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNL 741
E L +MR GF T DVEEEEKE ++ HSEKLA+A GLI+T+ G IR++KNL
Sbjct: 583 EDLGNEMRLMGFVPTTEFVFFDVEEEEKERVLGYHSEKLAVALGLISTDHGQVIRVVKNL 642
Query: 742 RVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
RVC DCH K ISK+T R IVVRD NRFH F G CSC DYW
Sbjct: 643 RVCGDCHEVMKLISKITRREIVVRDNNRFHCFTNGSCSCNDYW 685
Score = 189 bits (481), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 125/476 (26%), Positives = 229/476 (48%), Gaps = 4/476 (0%)
Query: 14 SLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLF 73
+L+ A T + L Q H +I H +D V L R F+ T Y+ LF P++F
Sbjct: 18 TLISVACTVNHLKQIHVSLINHHLHHDTFLVNLLLKRTLFFRQTKYSYLLFSHTQFPNIF 77
Query: 74 LFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGH 133
L+N +I GF NN + ++ + +RK+ L FT+ VL A + R +G+ LH
Sbjct: 78 LYNSLINGFVNNHLFHETLDLFLSIRKH-GLYLHGFTFPLVLKACTRASSRKLGIDLHSL 136
Query: 134 AIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDS 193
+ G+ D+ +L+ +Y + A K+FD++P++ V W ++ SG + +++
Sbjct: 137 VVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREA 196
Query: 194 IWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVS 253
I +F MV G DS + VL A V +L G I ++ + +V T LV+
Sbjct: 197 IDLFKKMVEM-GVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVN 255
Query: 254 FYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSST 313
Y+KCG++E+A +F +V D+++ + MI GY N + + LF Q+L + + +
Sbjct: 256 LYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFS 315
Query: 314 IVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESS 373
IVG + G L L S + ++N + AL +Y++ M ++F E
Sbjct: 316 IVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMK 375
Query: 374 EKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLG-K 432
EK + NA I+G +NG + + ++F + + ++P+ T +L C G I G +
Sbjct: 376 EKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLR 435
Query: 433 WVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELF-DLMSHKSEVTWNTMISG 487
+ + + + + ++D++ + G + +A L D+ + + W ++SG
Sbjct: 436 FFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSG 491
>sp|Q9FXB9|PPR84_ARATH Pentatricopeptide repeat-containing protein At1g56690,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H69 PE=2
SV=1
Length = 704
Score = 458 bits (1178), Expect = e-128, Method: Compositional matrix adjust.
Identities = 252/661 (38%), Positives = 376/661 (56%), Gaps = 33/661 (4%)
Query: 148 ALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMV-RNGGT 206
++V YF K AR++FD+M E++ V WN ++SG +KN ++ VF M RN +
Sbjct: 53 SIVSGYFSNGLPKEARQLFDEMSERNVVSWNGLVSGYIKNRMIVEARNVFELMPERNVVS 112
Query: 207 WLDSTSVAAVLPAVAEVQELRLGM----EIQCLGLKLGFHDH-----------------V 245
W V E + L M E+ + G D V
Sbjct: 113 WTAMVKGYMQEGMVGEAESLFWRMPERNEVSWTVMFGGLIDDGRIDKARKLYDMMPVKDV 172
Query: 246 YVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLAS 305
T ++ + G V+ A L+F ++ ++++ MI+GY N + + + +LF +
Sbjct: 173 VASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVMPEK 232
Query: 306 AERVNSSTIVGLIPVFYPFGHLH-LTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEA 364
E +S ++G + G + +K I N+ ++ + + E+
Sbjct: 233 TEVSWTSMLLG----YTLSGRIEDAEEFFEVMPMKPVIACNAMIVG-----FGEVGEISK 283
Query: 365 ARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQ 424
AR++FD ++ A+W MI Y + G EA+ LF +MQ V P+ ++ SILS CA
Sbjct: 284 ARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCAT 343
Query: 425 LGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTM 484
L ++ G+ VH + F+ ++YV++ L+ MY KCG +V+A+ +FD S K + WN++
Sbjct: 344 LASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSI 403
Query: 485 ISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHG 544
ISGY HG G EAL++F EM SG P+ VT +++L ACS+AG + EG EIF+SM
Sbjct: 404 ISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFC 463
Query: 545 FKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVAS 604
P EHY+C VD+LGRAGQ++KA+E I+ + ++P VWGALLGAC H +LA VA+
Sbjct: 464 VTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALLGACKTHSRLDLAEVAA 523
Query: 605 EKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVF 664
+KLFE +P+N G +VLLS+I ++ + A VR+ ++ ++K PGC+ IEVG H+F
Sbjct: 524 KKLFENEPDNAGTYVLLSSINASRSKWGDVAVVRKNMRTNNVSKFPGCSWIEVGKKVHMF 583
Query: 665 TSGD-QLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIA 723
T G + HP+ I MLEK +G +REAG+ + LHDV+EEEK + HSE+LA+A
Sbjct: 584 TRGGIKNHPEQAMILMMLEKTDGLLREAGYSPDCSHVLHDVDEEEKVDSLSRHSERLAVA 643
Query: 724 FGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDY 783
+GL+ G IR++KNLRVC DCH A K ISKVT R I++RDANRFHHF G CSC DY
Sbjct: 644 YGLLKLPEGVPIRVMKNLRVCGDCHAAIKLISKVTEREIILRDANRFHHFNNGECSCRDY 703
Query: 784 W 784
W
Sbjct: 704 W 704
Score = 131 bits (329), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 116/490 (23%), Positives = 212/490 (43%), Gaps = 50/490 (10%)
Query: 50 RLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNF 109
RLS AR F S+ + +N I+ G+ +N +PK + + + + ++ +
Sbjct: 26 RLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSERNVVSWNGL 85
Query: 110 TYSFVLSAASACCDRSIGVLLHGHAIVS------GYGSDLFVGAALVDLYFKF------S 157
++ + R++ L+ +VS GY + VG A L+++ S
Sbjct: 86 VSGYIKNRMIVEA-RNVFELMPERNVVSWTAMVKGYMQEGMVGEA-ESLFWRMPERNEVS 143
Query: 158 W------------VKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMV-RNG 204
W + ARK++D MP KD V +MI GL + ++ +F +M RN
Sbjct: 144 WTVMFGGLIDDGRIDKARKLYDMMPVKDVVASTNMIGGLCREGRVDEARLIFDEMRERNV 203
Query: 205 GTWL---------DSTSVA----AVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVL--- 248
TW + VA V+P EV + + G + V+
Sbjct: 204 VTWTTMITGYRQNNRVDVARKLFEVMPEKTEVSWTSMLLGYTLSGRIEDAEEFFEVMPMK 263
Query: 249 -----TGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLL 303
++ + + GE+ +A +F + D + MI Y G +L LF Q+
Sbjct: 264 PVIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQ 323
Query: 304 ASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEME 363
R + +++ ++ V L +H+ ++ + V + L T+Y + E+
Sbjct: 324 KQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELV 383
Query: 364 AARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACA 423
A+ +FD S K + WN++I+GY +GL EEA+ +F EM +S PN VT+ +IL+AC+
Sbjct: 384 KAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACS 443
Query: 424 QLGAISLGKWVHELVKSR-NFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVT-W 481
G + G + E ++S+ + + +DM + G + +A EL + M+ K + T W
Sbjct: 444 YAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVW 503
Query: 482 NTMISGYGLH 491
++ H
Sbjct: 504 GALLGACKTH 513
Score = 95.5 bits (236), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/341 (24%), Positives = 148/341 (43%), Gaps = 61/341 (17%)
Query: 252 VSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNS 311
+S S+ G++ A F + + S N+++SGY NG + + +LF ++ +ER
Sbjct: 24 ISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEM---SER--- 77
Query: 312 STIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDE 371
N + L SG + N ++ AR +F+
Sbjct: 78 -------------------NVVSWNGLVSGYIKNRMIV--------------EARNVFEL 104
Query: 372 SSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLG 431
E+++ SW AM+ GY Q G+ EA SLF M N V+ + + G I
Sbjct: 105 MPERNVVSWTAMVKGYMQEGMVGEAESLFWRMPER----NEVSWTVMFGGLIDDGRIDKA 160
Query: 432 KWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLH 491
+ +++++ + ++ ST +I + G + EAR +FD M ++ VTW TMI+GY +
Sbjct: 161 RKLYDMMPVK----DVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQN 216
Query: 492 GHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEH 551
A +LF M + V++ S+L + +G + + +E F+ M P+
Sbjct: 217 NRVDVARKLFEVMPEK----TEVSWTSMLLGYTLSGRIEDAEEFFEVM-------PMKPV 265
Query: 552 YAC--MVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGA 590
AC M+ G G++ KA L + A W ++ A
Sbjct: 266 IACNAMIVGFGEVGEISKARRVFD-LMEDRDNATWRGMIKA 305
Score = 70.1 bits (170), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 113/241 (46%), Gaps = 8/241 (3%)
Query: 60 ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
AR +F + D + +I+ + ++ + ++K + P + +LS +
Sbjct: 284 ARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQ-GVRPSFPSLISILSVCA 342
Query: 120 ACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNS 179
G +H H + + D++V + L+ +Y K + A+ VFD+ KD ++WNS
Sbjct: 343 TLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNS 402
Query: 180 MISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEI-QCLGLK 238
+ISG + ++++ +F +M + GT + ++ A+L A + +L G+EI + + K
Sbjct: 403 IISGYASHGLGEEALKIFHEMP-SSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESK 461
Query: 239 LGFHDHVYVLTGLVSFYSKCGEVERA-ELLFRDIVRPDLISCNAMISGYTCNGKTESSLR 297
V + V + G+V++A EL+ ++PD A++ C KT S L
Sbjct: 462 FCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALLGA--C--KTHSRLD 517
Query: 298 L 298
L
Sbjct: 518 L 518
Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Query: 436 ELVKSRNFESNIYVSTAL-IDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHG 494
+L+ R + ++ V+ + I ++ G I EAR+ FD + K+ +WN+++SGY +G
Sbjct: 5 KLILRRTYLTSTGVNCSFEISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLP 64
Query: 495 LEALQLFSEM 504
EA QLF EM
Sbjct: 65 KEARQLFDEM 74
>sp|Q9LNU6|PPR53_ARATH Pentatricopeptide repeat-containing protein At1g20230
OS=Arabidopsis thaliana GN=PCMP-H21 PE=2 SV=2
Length = 760
Score = 455 bits (1171), Expect = e-127, Method: Compositional matrix adjust.
Identities = 242/724 (33%), Positives = 390/724 (53%), Gaps = 71/724 (9%)
Query: 131 HGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCF 190
H + SG +D ++ A L+ Y ++ A V +P+ ++S+I L K F
Sbjct: 38 HARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLF 97
Query: 191 QDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTG 250
SI VF M +G DS + + AE+ ++G +I C+ G +V
Sbjct: 98 TQSIGVFSRMFSHG-LIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGS 156
Query: 251 LVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVN 310
+ Y +CG + A +F + D+++C+A++ Y G E +R+ ++ +S N
Sbjct: 157 MFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEAN 216
Query: 311 SSTIVGLIPVFYPFGH-----------------------------------LHLTNCIHS 335
+ G++ F G+ L++ IH
Sbjct: 217 IVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHG 276
Query: 336 FCLKSGIVSNSSVLTALSTVYSR----------LNEMEAAR------------------- 366
+ +K G++ + V++A+ +Y + N+ E
Sbjct: 277 YVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDK 336
Query: 367 -----KLFDESS-EKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILS 420
+LF E + E ++ SW ++IAG QNG EA+ LF+EMQ + V PN VT+ S+L
Sbjct: 337 ALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLP 396
Query: 421 ACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVT 480
AC + A+ G+ H + N++V +ALIDMYAKCG I ++ +F++M K+ V
Sbjct: 397 ACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVC 456
Query: 481 WNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMI 540
WN++++G+ +HG E + +F ++ + ++P ++F S+L AC GL EG + F+ M
Sbjct: 457 WNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMS 516
Query: 541 HDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLA 600
++G KP EHY+CMV++LGRAG+L++A + IK + EP VWGALL +C + + +LA
Sbjct: 517 EEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLA 576
Query: 601 RVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGT 660
+A+EKLF L+PEN G +VLLSNIY+A+ + + ++R ++ L K PGC+ I+V
Sbjct: 577 EIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKNR 636
Query: 661 PHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKL 720
+ +GD+ HPQ I +++++ +MR++G + ALHDVEE+E+E M+ HSEKL
Sbjct: 637 VYTLLAGDKSHPQIDQITEKMDEISKEMRKSGHRPNLDFALHDVEEQEQEQMLWGHSEKL 696
Query: 721 AIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSC 780
A+ FGL+ T GT +++IKNLR+C DCH KFIS GR I +RD NRFHHFK G+CSC
Sbjct: 697 AVVFGLLNTPDGTPLQVIKNLRICGDCHAVIKFISSYAGREIFIRDTNRFHHFKDGICSC 756
Query: 781 GDYW 784
GD+W
Sbjct: 757 GDFW 760
Score = 163 bits (412), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 134/611 (21%), Positives = 262/611 (42%), Gaps = 79/611 (12%)
Query: 4 KTPQSRNLFLSLLKGAKTQS--QLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYAR 61
K PQS FL + S + TQ HA+I+ G QND KL S++ A
Sbjct: 11 KIPQSIVGFLESSSYHWSSSLSKTTQAHARILKSGAQNDGYISAKLIASYSNYNCFNDAD 70
Query: 62 ALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASAC 121
+ SIP P ++ F+ +I + ++ SI ++ + + L PD+ + +
Sbjct: 71 LVLQSIPDPTIYSFSSLIYALTKAKLFTQSIGVFSRMFSH-GLIPDSHVLPNLFKVCAEL 129
Query: 122 CDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMI 181
+G +H + VSG D FV ++ +Y + + ARKVFD+M +KD V ++++
Sbjct: 130 SAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALL 189
Query: 182 SGLMKNCCFQDSIWVFGDMVRNG----------------------------------GTW 207
+ C ++ + + +M +G G
Sbjct: 190 CAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFC 249
Query: 208 LDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEV------ 261
D +V++VLP+V + + L +G I +K G V++ ++ Y K G V
Sbjct: 250 PDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISL 309
Query: 262 -----------------------------ERAELLFRDIVRPDLISCNAMISGYTCNGKT 292
E EL + +++S ++I+G NGK
Sbjct: 310 FNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKD 369
Query: 293 ESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTAL 352
+L LFR++ + + N TI ++P L H F ++ ++ N V +AL
Sbjct: 370 IEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSAL 429
Query: 353 STVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNP 412
+Y++ + ++ +F+ K+L WN+++ G++ +G +E +S+F+ + +++ P+
Sbjct: 430 IDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDF 489
Query: 413 VTVSSILSACAQLGAISLG-KWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFD 471
++ +S+LSAC Q+G G K+ + + + + + ++++ + G + EA +L
Sbjct: 490 ISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIK 549
Query: 472 LMSHKSE-VTWNTMISGYGLHGHGLEALQLFSEMLH--SGIRPSGVTFLSVLYACSHAGL 528
M + + W +++ L + ++ ++ +E L P LS +YA G+
Sbjct: 550 EMPFEPDSCVWGALLNSCRLQ-NNVDLAEIAAEKLFHLEPENPGTYVLLSNIYAAK--GM 606
Query: 529 VREGDEIFQSM 539
E D I M
Sbjct: 607 WTEVDSIRNKM 617
>sp|Q5G1T1|PP272_ARATH Pentatricopeptide repeat-containing protein At3g49170,
chloroplastic OS=Arabidopsis thaliana GN=EMB2261 PE=2
SV=1
Length = 850
Score = 454 bits (1167), Expect = e-126, Method: Compositional matrix adjust.
Identities = 276/797 (34%), Positives = 432/797 (54%), Gaps = 23/797 (2%)
Query: 6 PQSRNLFLSLLKG---AKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARA 62
P F SLLK A+ HA++I + D L S + A
Sbjct: 59 PMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAED 118
Query: 63 LFFSIP---KPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
+F ++ K D+ ++ ++ + NN +I + + L P+++ Y+ V+ A S
Sbjct: 119 VFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLE-LGLVPNDYCYTAVIRACS 177
Query: 120 ACCDRSIGVLLHGHAIVSG-YGSDLFVGAALVDLYFKF-SWVKSARKVFDKMPEKDTVLW 177
+G + G + +G + SD+ VG +L+D++ K + ++A KVFDKM E + V W
Sbjct: 178 NSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTW 237
Query: 178 NSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGL 237
MI+ M+ +++I F DMV +G D ++++V A AE++ L LG ++ +
Sbjct: 238 TLMITRCMQMGFPREAIRFFLDMVLSGFE-SDKFTLSSVFSACAELENLSLGKQLHSWAI 296
Query: 238 KLGFHDHVYVLTGLVSFYSKC---GEVERAELLFRDIVRPDLISCNAMISGY--TCNGKT 292
+ G D V LV Y+KC G V+ +F + ++S A+I+GY CN T
Sbjct: 297 RSGLVDDVEC--SLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLAT 354
Query: 293 ESSLRLFRQLLASAE-RVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTA 351
E+ + LF +++ N T + + K G+ SNSSV +
Sbjct: 355 EA-INLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANS 413
Query: 352 LSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPN 411
+ +++ + + ME A++ F+ SEK+L S+N + G +N E+A L E+ ++ +
Sbjct: 414 VISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVS 473
Query: 412 PVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFD 471
T +S+LS A +G+I G+ +H V N V ALI MY+KCG+I A +F+
Sbjct: 474 AFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFN 533
Query: 472 LMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVRE 531
M +++ ++W +MI+G+ HG + L+ F++M+ G++P+ VT++++L ACSH GLV E
Sbjct: 534 FMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSE 593
Query: 532 GDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGAC 591
G F SM DH KP EHYACMVD+L RAG L A EFI + + VW LGAC
Sbjct: 594 GWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGAC 653
Query: 592 MIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPG 651
+H +T L ++A+ K+ ELDP ++ LSNIY+ + ++ +R+ +K+R L K G
Sbjct: 654 RVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKERNLVKEGG 713
Query: 652 CTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKEL 711
C+ IEVG H F GD HP + IY L++L +++ G+ +T LH +EEE E
Sbjct: 714 CSWIEVGDKIHKFYVGDTAHPNAHQIYDELDRLITEIKRCGYVPDTDLVLHKLEEENDEA 773
Query: 712 ----MMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDA 767
++ HSEK+A+AFGLI+T +R+ KNLRVC DCH A K+IS V+GR IV+RD
Sbjct: 774 EKERLLYQHSEKIAVAFGLISTSKSRPVRVFKNLRVCGDCHNAMKYISTVSGREIVLRDL 833
Query: 768 NRFHHFKGGVCSCGDYW 784
NRFHHFK G CSC DYW
Sbjct: 834 NRFHHFKDGKCSCNDYW 850
Score = 147 bits (372), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 106/358 (29%), Positives = 181/358 (50%), Gaps = 34/358 (9%)
Query: 200 MVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCG 259
M R+G +DS + +++L + ++ RLG + ++ + L+S YSK G
Sbjct: 52 MARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSG 111
Query: 260 EVERAELLFRDIVR---PDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVG 316
+ +AE +F + R D++S +AM++ Y NG+ ++++F + L +G
Sbjct: 112 DSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLE----------LG 161
Query: 317 LIPVFYPFGHLHLTNCIHS-----------FCLKSG-IVSNSSVLTALSTVYSR-LNEME 363
L+P Y + + + C +S F +K+G S+ V +L ++ + N E
Sbjct: 162 LVPNDYCYTAV-IRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFE 220
Query: 364 AARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACA 423
A K+FD+ SE ++ +W MI Q G EAI F +M S + T+SS+ SACA
Sbjct: 221 NAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACA 280
Query: 424 QLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKC---GNIVEARELFDLMSHKSEVT 480
+L +SLGK +H + V +L+DMYAKC G++ + R++FD M S ++
Sbjct: 281 ELENLSLGKQLHSWAIRSGLVDD--VECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMS 338
Query: 481 WNTMISGYGLHGH-GLEALQLFSEMLHSG-IRPSGVTFLSVLYACSHAGLVREGDEIF 536
W +I+GY + + EA+ LFSEM+ G + P+ TF S AC + R G ++
Sbjct: 339 WTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVL 396
>sp|Q56XI1|PPR25_ARATH Pentatricopeptide repeat-containing protein At1g09410
OS=Arabidopsis thaliana GN=PCMP-H18 PE=2 SV=2
Length = 705
Score = 453 bits (1165), Expect = e-126, Method: Compositional matrix adjust.
Identities = 244/663 (36%), Positives = 384/663 (57%), Gaps = 36/663 (5%)
Query: 148 ALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMV-RNGGT 206
++V YF + ARK+FD+MP+++ + WN ++SG MKN ++ VF M RN +
Sbjct: 53 SMVAGYFANLMPRDARKLFDEMPDRNIISWNGLVSGYMKNGEIDEARKVFDLMPERNVVS 112
Query: 207 WL-----------------------DSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHD 243
W + V+ + + +Q+ R+ + C ++
Sbjct: 113 WTALVKGYVHNGKVDVAESLFWKMPEKNKVSWTVMLIGFLQDGRI--DDACKLYEMIPDK 170
Query: 244 HVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLL 303
T ++ K G V+ A +F ++ +I+ M++GY N + + + ++F +
Sbjct: 171 DNIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMP 230
Query: 304 ASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEME 363
E +S ++G + G + + +++ +++++ L + E+
Sbjct: 231 EKTEVSWTSMLMG----YVQNGRIEDAEELFEVMPVKPVIACNAMISGLG----QKGEIA 282
Query: 364 AARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACA 423
AR++FD E++ ASW +I + +NG EA+ LF MQ V P T+ SILS CA
Sbjct: 283 KARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCA 342
Query: 424 QLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNT 483
L ++ GK VH + F+ ++YV++ L+ MY KCG +V+++ +FD K + WN+
Sbjct: 343 SLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNS 402
Query: 484 MISGYGLHGHGLEALQLFSEMLHSG-IRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHD 542
+ISGY HG G EAL++F EM SG +P+ VTF++ L ACS+AG+V EG +I++SM
Sbjct: 403 IISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESV 462
Query: 543 HGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARV 602
G KP+ HYACMVD+LGRAG+ +A+E I + VEP AVWG+LLGAC H ++A
Sbjct: 463 FGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQLDVAEF 522
Query: 603 ASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPH 662
++KL E++PEN G ++LLSN+Y+++ + A +R+++K R + K+PGC+ EV H
Sbjct: 523 CAKKLIEIEPENSGTYILLSNMYASQGRWADVAELRKLMKTRLVRKSPGCSWTEVENKVH 582
Query: 663 VFTSGD-QLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLA 721
FT G HP+ +I +L++L+G +REAG+ + ALHDV+EEEK +K HSE+LA
Sbjct: 583 AFTRGGINSHPEQESILKILDELDGLLREAGYNPDCSYALHDVDEEEKVNSLKYHSERLA 642
Query: 722 IAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCG 781
+A+ L+ G IR++KNLRVC DCHTA K ISKV R I++RDANRFHHF+ G CSC
Sbjct: 643 VAYALLKLSEGIPIRVMKNLRVCSDCHTAIKIISKVKEREIILRDANRFHHFRNGECSCK 702
Query: 782 DYW 784
DYW
Sbjct: 703 DYW 705
Score = 129 bits (323), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 98/384 (25%), Positives = 171/384 (44%), Gaps = 58/384 (15%)
Query: 159 VKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMV-RNGGTWLDSTSVAAVL 217
+ ARK+FD K WNSM++G N +D+ +F +M RN +W
Sbjct: 33 IHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPDRNIISW---------- 82
Query: 218 PAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLI 277
GLVS Y K GE++ A +F + +++
Sbjct: 83 -------------------------------NGLVSGYMKNGEIDEARKVFDLMPERNVV 111
Query: 278 SCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFC 337
S A++ GY NGK + + LF ++ E+ S V LI F G + ++
Sbjct: 112 SWTALVKGYVHNGKVDVAESLFWKM---PEKNKVSWTVMLIG-FLQDGRIDDACKLYEMI 167
Query: 338 LKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAI 397
++ +S++ L + ++ AR++FDE SE+S+ +W M+ GY QN ++A
Sbjct: 168 PDKDNIARTSMIHGL----CKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDAR 223
Query: 398 SLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMY 457
+F M V+ +S+L Q G I + + E++ + + A+I
Sbjct: 224 KIFDVMPEK----TEVSWTSMLMGYVQNGRIEDAEELFEVMPVK----PVIACNAMISGL 275
Query: 458 AKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFL 517
+ G I +AR +FD M +++ +W T+I + +G LEAL LF M G+RP+ T +
Sbjct: 276 GQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLI 335
Query: 518 SVLYACSHAGLVREGDEIFQSMIH 541
S+L C+ + G ++ ++
Sbjct: 336 SILSVCASLASLHHGKQVHAQLVR 359
Score = 107 bits (268), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 90/339 (26%), Positives = 153/339 (45%), Gaps = 61/339 (17%)
Query: 252 VSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNS 311
++ S+ G++ A LF + S N+M++GY N + +LF ++ +R
Sbjct: 24 ITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEM---PDR--- 77
Query: 312 STIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDE 371
N I L SG + N E++ ARK+FD
Sbjct: 78 -------------------NIISWNGLVSGYMKNG--------------EIDEARKVFDL 104
Query: 372 SSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLG 431
E+++ SW A++ GY NG + A SLF +M N V+ + +L Q G I
Sbjct: 105 MPERNVVSWTALVKGYVHNGKVDVAESLFWKMPEK----NKVSWTVMLIGFLQDGRIDDA 160
Query: 432 KWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLH 491
++E++ ++ NI T++I K G + EARE+FD MS +S +TW TM++GYG +
Sbjct: 161 CKLYEMIPDKD---NI-ARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQN 216
Query: 492 GHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEH 551
+A ++F M + V++ S+L G + + +E+F+ M P+
Sbjct: 217 NRVDDARKIFDVMPEK----TEVSWTSMLMGYVQNGRIEDAEELFEVM-------PVKPV 265
Query: 552 YAC--MVDILGRAGQLEKALEFIKGLAVEPGPAVWGALL 588
AC M+ LG+ G++ KA + E A W ++
Sbjct: 266 IACNAMISGLGQKGEIAKARRVFDSMK-ERNDASWQTVI 303
Score = 60.8 bits (146), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 84/173 (48%), Gaps = 1/173 (0%)
Query: 60 ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
AR +F S+ + + + +I+ N ++ + ++K + P T +LS +
Sbjct: 284 ARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQ-GVRPTFPTLISILSVCA 342
Query: 120 ACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNS 179
+ G +H + + D++V + L+ +Y K + ++ +FD+ P KD ++WNS
Sbjct: 343 SLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNS 402
Query: 180 MISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEI 232
+ISG + ++++ VF +M +G T + + A L A + + G++I
Sbjct: 403 IISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKI 455
>sp|Q9S7F4|PP206_ARATH Putative pentatricopeptide repeat-containing protein At2g01510
OS=Arabidopsis thaliana GN=PCMP-H36 PE=3 SV=1
Length = 825
Score = 452 bits (1162), Expect = e-126, Method: Compositional matrix adjust.
Identities = 241/730 (33%), Positives = 412/730 (56%), Gaps = 7/730 (0%)
Query: 60 ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALT-PDNFTYSFVLSAA 118
AR LF ++P + + +++ ++ N + + + ++++ T PD+ T++ +L
Sbjct: 98 ARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGC 157
Query: 119 SACCDRSIGVLLHGHAIVSGYGSDLF--VGAALVDLYFKFSWVKSARKVFDKMPEKDTVL 176
+ ++ +H A+ G+ ++ F V L+ Y + + A +F+++PEKD+V
Sbjct: 158 NDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVT 217
Query: 177 WNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLG 236
+N++I+G K+ + +SI +F M ++G D T + VL AV + + LG ++ L
Sbjct: 218 FNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFT-FSGVLKAVVGLHDFALGQQLHALS 276
Query: 237 LKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSL 296
+ GF V ++ FYSK V +LF ++ D +S N +IS Y+ + E+SL
Sbjct: 277 VTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASL 336
Query: 297 RLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVY 356
FR++ + ++ + L + +H L + S V +L +Y
Sbjct: 337 HFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMY 396
Query: 357 SRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVS 416
++ E A +F +++ SW A+I+GY Q GL + LF +M+ S + + T +
Sbjct: 397 AKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFA 456
Query: 417 SILSACAQLGAISLGKWVHE-LVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSH 475
++L A A ++ LGK +H +++S N E N++ + L+DMYAKCG+I +A ++F+ M
Sbjct: 457 TVLKASASFASLLLGKQLHAFIIRSGNLE-NVFSGSGLVDMYAKCGSIKDAVQVFEEMPD 515
Query: 476 KSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEI 535
++ V+WN +IS + +G G A+ F++M+ SG++P V+ L VL ACSH G V +G E
Sbjct: 516 RNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEY 575
Query: 536 FQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHK 595
FQ+M +G P +HYACM+D+LGR G+ +A + + + EP +W ++L AC IHK
Sbjct: 576 FQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHK 635
Query: 596 DTNLARVASEKLFELDP-ENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTL 654
+ +LA A+EKLF ++ + +V +SNIY+A ++ + V++ +++R + K P +
Sbjct: 636 NQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIKKVPAYSW 695
Query: 655 IEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMK 714
+EV HVF+S DQ HP I + +L ++ G++ +T + + DV+E+ K +K
Sbjct: 696 VEVNHKIHVFSSNDQTHPNGDEIVRKINELTAEIEREGYKPDTSSVVQDVDEQMKIESLK 755
Query: 715 VHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFK 774
HSE+LA+AF LI+T G I ++KNLR C DCH A K ISK+ R I VRD +RFHHF
Sbjct: 756 YHSERLAVAFALISTPEGCPIVVMKNLRACRDCHAAIKLISKIVKREITVRDTSRFHHFS 815
Query: 775 GGVCSCGDYW 784
GVCSCGDYW
Sbjct: 816 EGVCSCGDYW 825
Score = 178 bits (452), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 140/532 (26%), Positives = 242/532 (45%), Gaps = 68/532 (12%)
Query: 135 IVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMK-------- 186
I +G+ +D +V+ + V +ARKV+D+MP K+TV N+MISG +K
Sbjct: 40 IKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKTGDVSSAR 99
Query: 187 -----------------------NCCFQDSIWVFGDMVRNGG-TWLDSTSVAAVLPAVAE 222
N F ++ +F M R+ T D + +LP +
Sbjct: 100 DLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCND 159
Query: 223 VQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAEL---LFRDIVRPDLISC 279
++ +KLGF + ++ V S C EV R +L LF +I D ++
Sbjct: 160 AVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYC-EVRRLDLACVLFEEIPEKDSVTF 218
Query: 280 NAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLK 339
N +I+GY +G S+ LF ++ S + + T G++ L +H+ +
Sbjct: 219 NTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVT 278
Query: 340 SGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISL 399
+G ++SV + YS+ + + R LFDE E S+N +I+ Y+Q E ++
Sbjct: 279 TGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHF 338
Query: 400 FQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAK 459
F+EMQ +++LS A L ++ +G+ +H +S ++V +L+DMYAK
Sbjct: 339 FREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAK 398
Query: 460 CGNIVEARELFDLMSHKSEVTWNTMISGY---GLHGHGLEALQLFSEMLHSGIRPSGVTF 516
C EA +F + ++ V+W +ISGY GLHG G L+LF++M S +R TF
Sbjct: 399 CEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAG---LKLFTKMRGSNLRADQSTF 455
Query: 517 LSVLYACS-----------HAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQL 565
+VL A + HA ++R G+ +++ G +VD+ + G +
Sbjct: 456 ATVLKASASFASLLLGKQLHAFIIRSGN--LENVFSGSG----------LVDMYAKCGSI 503
Query: 566 EKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFE--LDPENV 615
+ A++ + + + W AL+ A + D A A K+ E L P++V
Sbjct: 504 KDAVQVFEEMP-DRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSV 554
Score = 141 bits (356), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 114/450 (25%), Positives = 206/450 (45%), Gaps = 35/450 (7%)
Query: 27 QTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNE 86
Q HA + GF D S ++ S R LF +P+ D +NV+I +S +
Sbjct: 271 QLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQAD 330
Query: 87 MPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVG 146
++S+ F+ + + NF ++ +LS A+ +G LH A+++ S L VG
Sbjct: 331 QYEASLHFFREM-QCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVG 389
Query: 147 AALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGT 206
+LVD+Y K + A +F +P++ TV W ++ISG ++ + +F M R
Sbjct: 390 NSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKM-RGSNL 448
Query: 207 WLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAEL 266
D ++ A VL A A L LG ++ ++ G ++V+ +GLV Y+KCG ++ A
Sbjct: 449 RADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQ 508
Query: 267 LFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGH 326
+F ++ + +S NA+IS + NG E+++ F +++ S + +S +I+G+
Sbjct: 509 VFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGV--------- 559
Query: 327 LHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAG 386
LT C H ++ G + A+S +Y + +K + M+
Sbjct: 560 --LTACSHCGFVEQG----TEYFQAMSPIYG----ITPKKK-----------HYACMLDL 598
Query: 387 YTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESN 446
+NG EA L EM P+ + SS+L+AC SL + E + S +
Sbjct: 599 LGRNGRFAEAEKLMDEM---PFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRD 655
Query: 447 IYVSTALIDMYAKCGNIVEARELFDLMSHK 476
++ ++YA G + R++ M +
Sbjct: 656 AAAYVSMSNIYAAAGEWEKVRDVKKAMRER 685
Score = 79.0 bits (193), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 113/258 (43%), Gaps = 36/258 (13%)
Query: 301 QLLASAERVNSSTIVGLIPVFYPFGHLHL-TNCIHSFCLKSGIVSNSSVLTALSTVYSRL 359
+L ++ V S T+ L + P L T + + +K+G +++ + R
Sbjct: 2 KLYCNSNEVRSRTLATLRQLRQPSPATFLDTRRVDARIIKTGFDTDTCRSNFIVEDLLRR 61
Query: 360 NEMEAARKLFDESSEKSLASWNAMIAG-------------------------------YT 388
++ AARK++DE K+ S N MI+G Y
Sbjct: 62 GQVSAARKVYDEMPHKNTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYA 121
Query: 389 QNGLTEEAISLFQEM--QASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESN 446
+N +EA LF++M +S P+ VT +++L C + VH F++N
Sbjct: 122 RNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTN 181
Query: 447 IY--VSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEM 504
+ VS L+ Y + + A LF+ + K VT+NT+I+GY G E++ LF +M
Sbjct: 182 PFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKM 241
Query: 505 LHSGIRPSGVTFLSVLYA 522
SG +PS TF VL A
Sbjct: 242 RQSGHQPSDFTFSGVLKA 259
>sp|Q9SMZ2|PP347_ARATH Pentatricopeptide repeat-containing protein At4g33170
OS=Arabidopsis thaliana GN=PCMP-H53 PE=3 SV=1
Length = 990
Score = 451 bits (1161), Expect = e-126, Method: Compositional matrix adjust.
Identities = 254/682 (37%), Positives = 391/682 (57%), Gaps = 9/682 (1%)
Query: 107 DNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVF 166
D T+ +L+ A ++G +H A+ G L V +L+++Y K AR VF
Sbjct: 314 DQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVF 373
Query: 167 DKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQE- 225
D M E+D + WNS+I+G+ +N +++ +F ++R G D ++ +VL A + + E
Sbjct: 374 DNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLR-CGLKPDQYTMTSVLKAASSLPEG 432
Query: 226 LRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISG 285
L L ++ +K+ +V T L+ YS+ ++ AE+LF + DL++ NAM++G
Sbjct: 433 LSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILF-ERHNFDLVAWNAMMAG 491
Query: 286 YTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNC---IHSFCLKSGI 342
YT + +L+LF + ER + T L VF G L N +H++ +KSG
Sbjct: 492 YTQSHDGHKTLKLFALMHKQGERSDDFT---LATVFKTCGFLFAINQGKQVHAYAIKSGY 548
Query: 343 VSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQE 402
+ V + + +Y + +M AA+ FD +W MI+G +NG E A +F +
Sbjct: 549 DLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQ 608
Query: 403 MQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGN 462
M+ V P+ T++++ A + L A+ G+ +H N ++ +V T+L+DMYAKCG+
Sbjct: 609 MRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGS 668
Query: 463 IVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYA 522
I +A LF + + WN M+ G HG G E LQLF +M GI+P VTF+ VL A
Sbjct: 669 IDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSA 728
Query: 523 CSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPA 582
CSH+GLV E + +SM D+G KP EHY+C+ D LGRAG +++A I+ +++E +
Sbjct: 729 CSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASAS 788
Query: 583 VWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVK 642
++ LL AC + DT + + KL EL+P + +VLLSN+Y+A + + R ++K
Sbjct: 789 MYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMK 848
Query: 643 KRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALH 702
K+ K PG + IEV H+F D+ + Q+ IY ++ + +++ G+ ET L
Sbjct: 849 GHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQTELIYRKVKDMIRDIKQEGYVPETDFTLV 908
Query: 703 DVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVI 762
DVEEEEKE + HSEKLA+AFGL++T P T IR+IKNLRVC DCH A K+I+KV R I
Sbjct: 909 DVEEEEKERALYYHSEKLAVAFGLLSTPPSTPIRVIKNLRVCGDCHNAMKYIAKVYNREI 968
Query: 763 VVRDANRFHHFKGGVCSCGDYW 784
V+RDANRFH FK G+CSCGDYW
Sbjct: 969 VLRDANRFHRFKDGICSCGDYW 990
Score = 197 bits (502), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 186/701 (26%), Positives = 299/701 (42%), Gaps = 105/701 (14%)
Query: 12 FLSLLKGAKTQSQLTQ---THAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIP 68
+ L+ A T S L THA+I+ + + L S + YAR +F +P
Sbjct: 42 WFGFLRNAITSSDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMP 101
Query: 69 KPDLFLFNVIIRGFSNN-----EMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCD 123
DL +N I+ ++ + E + + + LR++ +T LS C
Sbjct: 102 DRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVV-----YTSRMTLSPMLKLCL 156
Query: 124 RSIGVL----LHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNS 179
S V HG+A G D FV ALV++Y KF VK + +F++MP +D VLWN
Sbjct: 157 HSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNL 216
Query: 180 MISGLMKNCCFQDSI----------------------WVFGD------------------ 199
M+ ++ +++I + GD
Sbjct: 217 MLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITLRLLARISGDDSDAGQVKSFANGNDASS 276
Query: 200 ----MVRNGG--TWLDSTSVAAVLPAVAEVQE----------------------LRLGME 231
+ RN G +L S +A+L A++ E L LG +
Sbjct: 277 VSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQ 336
Query: 232 IQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGK 291
+ C+ LKLG + V L++ Y K + A +F ++ DLIS N++I+G NG
Sbjct: 337 VHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGL 396
Query: 292 TESSLRLFRQLLASAERVNSSTIVGLIPVF--YPFGHLHLTNCIHSFCLKSGIVSNSSVL 349
++ LF QLL + + T+ ++ P G L L+ +H +K VS+S V
Sbjct: 397 EVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEG-LSLSKQVHVHAIKINNVSDSFVS 455
Query: 350 TALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVA 409
TAL YSR M+ A LF E L +WNAM+AGYTQ+ + + LF M
Sbjct: 456 TALIDAYSRNRCMKEAEILF-ERHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGER 514
Query: 410 PNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEAREL 469
+ T++++ C L AI+ GK VH ++ +++VS+ ++DMY KCG++ A+
Sbjct: 515 SDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFA 574
Query: 470 FDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLV 529
FD + +V W TMISG +G A +FS+M G+ P T ++ A S +
Sbjct: 575 FDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTAL 634
Query: 530 REGDEIFQSMIHDHGFK------PLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAV 583
+G + IH + K P +VD+ + G ++ A K + + A
Sbjct: 635 EQGRQ-----IHANALKLNCTNDPFVG--TSLVDMYAKCGSIDDAYCLFKRIEMMNITA- 686
Query: 584 WGALLGACMIHKD--TNLARVASEKLFELDPENVGYHVLLS 622
W A+L H + L K + P+ V + +LS
Sbjct: 687 WNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLS 727
Score = 171 bits (433), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 128/502 (25%), Positives = 238/502 (47%), Gaps = 7/502 (1%)
Query: 27 QTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNE 86
Q H + G L+ L + + +AR +F ++ + DL +N +I G + N
Sbjct: 336 QVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNG 395
Query: 87 MPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCD-RSIGVLLHGHAIVSGYGSDLFV 145
+ ++C + L + L PD +T + VL AAS+ + S+ +H HAI SD FV
Sbjct: 396 LEVEAVCLFMQLLR-CGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFV 454
Query: 146 GAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGG 205
AL+D Y + +K A +F++ D V WN+M++G ++ ++ +F M + G
Sbjct: 455 STALIDAYSRNRCMKEAEILFER-HNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGE 513
Query: 206 TWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAE 265
D ++A V + + G ++ +K G+ ++V +G++ Y KCG++ A+
Sbjct: 514 R-SDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQ 572
Query: 266 LLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFG 325
F I PD ++ MISG NG+ E + +F Q+ + TI L
Sbjct: 573 FAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLT 632
Query: 326 HLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIA 385
L IH+ LK ++ V T+L +Y++ ++ A LF ++ +WNAM+
Sbjct: 633 ALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLV 692
Query: 386 GYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLG-KWVHELVKSRNFE 444
G Q+G +E + LF++M++ + P+ VT +LSAC+ G +S K + + +
Sbjct: 693 GLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIK 752
Query: 445 SNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVT-WNTMISGYGLHGHGLEALQLFSE 503
I + L D + G + +A L + MS ++ + + T+++ + G ++ ++
Sbjct: 753 PEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKRVATK 812
Query: 504 MLH-SGIRPSGVTFLSVLYACS 524
+L + S LS +YA +
Sbjct: 813 LLELEPLDSSAYVLLSNMYAAA 834
Score = 68.9 bits (167), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 77/306 (25%), Positives = 135/306 (44%), Gaps = 15/306 (4%)
Query: 23 SQLTQTHAQIIIHGFQNDL---STVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVII 79
+Q Q HA I G+ DL S + + + D A +A F SIP PD + +I
Sbjct: 534 NQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFA---FDSIPVPDDVAWTTMI 590
Query: 80 RGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGY 139
G N + + ++ +R L PD FT + + A+S G +H +A+
Sbjct: 591 SGCIENGEEERAFHVFSQMRLMGVL-PDEFTIATLAKASSCLTALEQGRQIHANALKLNC 649
Query: 140 GSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGD 199
+D FVG +LVD+Y K + A +F ++ + WN+M+ GL ++ ++++ +F
Sbjct: 650 TNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQ 709
Query: 200 MVRNGGTWLDSTSVAAVLPAVAE---VQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYS 256
M ++ G D + VL A + V E M + + G + + L
Sbjct: 710 M-KSLGIKPDKVTFIGVLSACSHSGLVSEAYKHM--RSMHGDYGIKPEIEHYSCLADALG 766
Query: 257 KCGEVERAELLFRDIVRPDLISC-NAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIV 315
+ G V++AE L + S +++ G TE+ R+ +LL E ++SS V
Sbjct: 767 RAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKRVATKLL-ELEPLDSSAYV 825
Query: 316 GLIPVF 321
L ++
Sbjct: 826 LLSNMY 831
>sp|Q9M9E2|PPR45_ARATH Pentatricopeptide repeat-containing protein At1g15510,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H73 PE=2
SV=1
Length = 866
Score = 448 bits (1153), Expect = e-125, Method: Compositional matrix adjust.
Identities = 256/724 (35%), Positives = 402/724 (55%), Gaps = 6/724 (0%)
Query: 60 ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
A +F + + +LF +NV++ G++ ++C Y + + PD +T+ VL
Sbjct: 148 AWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCG 207
Query: 120 ACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNS 179
D + G +H H + GY D+ V AL+ +Y K VKSAR +FD+MP +D + WN+
Sbjct: 208 GIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNA 267
Query: 180 MISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKL 239
MISG +N + + +F M R D ++ +V+ A + + RLG +I +
Sbjct: 268 MISGYFENGMCHEGLELFFAM-RGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITT 326
Query: 240 GFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLF 299
GF + V L Y G AE LF + R D++S MISGY N + ++ +
Sbjct: 327 GFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTY 386
Query: 300 RQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRL 359
R + + + + T+ ++ G L +H +K+ ++S V L +YS+
Sbjct: 387 RMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKC 446
Query: 360 NEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSIL 419
++ A +F K++ SW ++IAG N EA+ ++M+ + + PN +T+++ L
Sbjct: 447 KCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQMKMT-LQPNAITLTAAL 505
Query: 420 SACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEV 479
+ACA++GA+ GK +H V + ++ AL+DMY +CG + A F+ S K +V
Sbjct: 506 AACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFN--SQKKDV 563
Query: 480 T-WNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQS 538
T WN +++GY G G ++LF M+ S +RP +TF+S+L CS + +VR+G F
Sbjct: 564 TSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSK 623
Query: 539 MIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTN 598
M D+G P +HYAC+VD+LGRAG+L++A +FI+ + V P PAVWGALL AC IH +
Sbjct: 624 M-EDYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRIHHKID 682
Query: 599 LARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVG 658
L ++++ +FELD ++VGY++LL N+Y+ + + A VR+++K+ L GC+ +EV
Sbjct: 683 LGELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKENGLTVDAGCSWVEVK 742
Query: 659 GTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSE 718
G H F S D+ HPQ+ I +LE KM E G + ++ D E ++ + HSE
Sbjct: 743 GKVHAFLSDDKYHPQTKEINTVLEGFYEKMSEVGLTKISESSSMDETEISRDEIFCGHSE 802
Query: 719 KLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVC 778
+ AIAFGLI T PG I + KNL +C +CH KFISK R I VRDA FHHFK G C
Sbjct: 803 RKAIAFGLINTVPGMPIWVTKNLSMCENCHDTVKFISKTVRREISVRDAEHFHHFKDGEC 862
Query: 779 SCGD 782
SCGD
Sbjct: 863 SCGD 866
Score = 198 bits (503), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 128/428 (29%), Positives = 217/428 (50%), Gaps = 10/428 (2%)
Query: 145 VGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNG 204
+G A + ++ +F + A VF KM E++ WN ++ G K F +++ ++ M+ G
Sbjct: 131 LGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVG 190
Query: 205 GTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERA 264
G D + VL + +L G E+ ++ G+ + V+ L++ Y KCG+V+ A
Sbjct: 191 GVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSA 250
Query: 265 ELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPF 324
LLF + R D+IS NAMISGY NG L LF + + + T+ +I
Sbjct: 251 RLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELL 310
Query: 325 GHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMI 384
G L IH++ + +G + SV +L+ +Y A KLF K + SW MI
Sbjct: 311 GDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMI 370
Query: 385 AGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFE 444
+GY N L ++AI ++ M V P+ +TV+++LSACA LG + G +H+L
Sbjct: 371 SGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLI 430
Query: 445 SNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEM 504
S + V+ LI+MY+KC I +A ++F + K+ ++W ++I+G L+ EAL +F
Sbjct: 431 SYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEAL-IFLRQ 489
Query: 505 LHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHD----HGFKPLAEHYACMVDILG 560
+ ++P+ +T + L AC+ G + G EI ++ F P A ++D+
Sbjct: 490 MKMTLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNA-----LLDMYV 544
Query: 561 RAGQLEKA 568
R G++ A
Sbjct: 545 RCGRMNTA 552
Score = 125 bits (313), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/259 (30%), Positives = 124/259 (47%), Gaps = 1/259 (0%)
Query: 283 ISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGI 342
+ G NGK E +++L + V+ V L+ + + ++S L S
Sbjct: 66 LHGLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMS 125
Query: 343 VSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQE 402
+ A ++ R + A +F + SE++L SWN ++ GY + G +EA+ L+
Sbjct: 126 SLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHR 185
Query: 403 M-QASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCG 461
M V P+ T +L C + ++ GK VH V +E +I V ALI MY KCG
Sbjct: 186 MLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCG 245
Query: 462 NIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLY 521
++ AR LFD M + ++WN MISGY +G E L+LF M + P +T SV+
Sbjct: 246 DVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVIS 305
Query: 522 ACSHAGLVREGDEIFQSMI 540
AC G R G +I +I
Sbjct: 306 ACELLGDRRLGRDIHAYVI 324
Score = 111 bits (277), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 113/451 (25%), Positives = 195/451 (43%), Gaps = 51/451 (11%)
Query: 29 HAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNEMP 88
HA +I GF D+S L + + A LF + + D+ + +I G+ N +P
Sbjct: 320 HAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLP 379
Query: 89 KSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAA 148
+I Y + +++ + PD T + VLSA + D GV LH AI + S + V
Sbjct: 380 DKAIDTYRMMDQDS-VKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANN 438
Query: 149 LVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGL-MKNCCFQDSIWVFGDMVRNGGTW 207
L+++Y K + A +F +P K+ + W S+I+GL + N CF+ I+ +R
Sbjct: 439 LINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIF-----LRQMKMT 493
Query: 208 L--DSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAE 265
L ++ ++ A L A A + L G EI L+ G ++ L+ Y +CG + A
Sbjct: 494 LQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAW 553
Query: 266 LLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFG 325
F + D+ S N +++GY+ G+ + LF +++ S R + T + L
Sbjct: 554 SQFNS-QKKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISL-------- 604
Query: 326 HLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIA 385
L C S ++ G++ S K+ D +L + ++
Sbjct: 605 ---LCGCSKSQMVRQGLMYFS--------------------KMEDYGVTPNLKHYACVVD 641
Query: 386 GYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFE- 444
+ G +EA Q+M V P+P ++L+AC I LG EL FE
Sbjct: 642 LLGRAGELQEAHKFIQKM---PVTPDPAVWGALLNACRIHHKIDLG----ELSAQHIFEL 694
Query: 445 --SNIYVSTALIDMYAKCGNIVEARELFDLM 473
++ L ++YA CG E ++ +M
Sbjct: 695 DKKSVGYYILLCNLYADCGKWREVAKVRRMM 725
Score = 76.6 bits (187), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 119/291 (40%), Gaps = 39/291 (13%)
Query: 386 GYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFES 445
G NG EEA+ L MQ +VA + +++ C A G V+ + S
Sbjct: 68 GLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSL 127
Query: 446 NIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEML 505
+ + A + M+ + GN+V+A +F MS ++ +WN ++ GY G+ EA+ L+ ML
Sbjct: 128 GVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRML 187
Query: 506 H-SGIRPSGVTFLSVLYACS-----------HAGLVREGDEIFQSMIH------------ 541
G++P TF VL C H +VR G E+ +++
Sbjct: 188 WVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDV 247
Query: 542 -------DHGFKPLAEHYACMVDILGRAGQLEKALEF---IKGLAVEPGPAVWGALLGAC 591
D + + M+ G + LE ++GL+V+P +++ AC
Sbjct: 248 KSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISAC 307
Query: 592 MIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVK 642
+ D L R + G+ V +S S + YL A + R+ K
Sbjct: 308 ELLGDRRLGRDIHAYVI-----TTGFAVDISVCNSLTQMYLNAGSWREAEK 353
>sp|Q9FIB2|PP373_ARATH Putative pentatricopeptide repeat-containing protein At5g09950
OS=Arabidopsis thaliana GN=PCMP-H35 PE=3 SV=1
Length = 995
Score = 448 bits (1153), Expect = e-125, Method: Compositional matrix adjust.
Identities = 264/773 (34%), Positives = 416/773 (53%), Gaps = 17/773 (2%)
Query: 25 LTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSN 84
L Q I G DL + L + + YAR +F + + N ++ G
Sbjct: 227 LEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVR 286
Query: 85 NEMPKSSICFYTHLRKNTALTPDNFTY---SFVLSAASACCDRSIGVLLHGHAIVSGYGS 141
+ + + + + ++P+++ SF + + G +HGH I +G
Sbjct: 287 QKWGEEATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVD 346
Query: 142 DLF-VGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDM 200
+ +G LV++Y K + AR+VF M +KD+V WNSMI+GL +N CF +++ + M
Sbjct: 347 FMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSM 406
Query: 201 VRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGE 260
R+ S ++ + L + A ++ +LG +I LKLG +V V L++ Y++ G
Sbjct: 407 RRHD-ILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGY 465
Query: 261 VERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLR----LFRQLLASAERVNSSTIVG 316
+ +F + D +S N++I ++E SL F + +++N T
Sbjct: 466 LNECRKIFSSMPEHDQVSWNSIIGALA---RSERSLPEAVVCFLNAQRAGQKLNRITFSS 522
Query: 317 LIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEK- 375
++ L IH LK+ I ++ AL Y + EM+ K+F +E+
Sbjct: 523 VLSAVSSLSFGELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERR 582
Query: 376 SLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVH 435
+WN+MI+GY N L +A+ L M + + +++LSA A + + G VH
Sbjct: 583 DNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVH 642
Query: 436 ELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGL 495
ES++ V +AL+DMY+KCG + A F+ M ++ +WN+MISGY HG G
Sbjct: 643 ACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGE 702
Query: 496 EALQLFSEM-LHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYAC 554
EAL+LF M L P VTF+ VL ACSHAGL+ EG + F+SM +G P EH++C
Sbjct: 703 EALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSC 762
Query: 555 MVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGAC--MIHKDTNLARVASEKLFELDP 612
M D+LGRAG+L+K +FI+ + ++P +W +LGAC + L + A+E LF+L+P
Sbjct: 763 MADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEP 822
Query: 613 ENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHP 672
EN +VLL N+Y+A + R+ +K + K G + + + H+F +GD+ HP
Sbjct: 823 ENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWVTMKDGVHMFVAGDKSHP 882
Query: 673 QSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPG 732
+ IY L++LN KMR+AG+ +T AL+D+E+E KE ++ HSEKLA+AF L A
Sbjct: 883 DADVIYKKLKELNRKMRDAGYVPQTGFALYDLEQENKEEILSYHSEKLAVAFVLAAQRSS 942
Query: 733 T-EIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
T IRI+KNLRVC DCH+A K+ISK+ GR I++RD+NRFHHF+ G CSC D+W
Sbjct: 943 TLPIRIMKNLRVCGDCHSAFKYISKIEGRQIILRDSNRFHHFQDGACSCSDFW 995
Score = 160 bits (405), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 121/443 (27%), Positives = 211/443 (47%), Gaps = 34/443 (7%)
Query: 115 LSAASACCD-RSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKD 173
LS +C R H + D+++ L++ Y + SARKVFD+MP ++
Sbjct: 7 LSFVQSCVGHRGAARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRN 66
Query: 174 TVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRL--GME 231
V W ++SG +N ++++ DMV+ G + + + +VL A E+ + + G +
Sbjct: 67 CVSWACIVSGYSRNGEHKEALVFLRDMVKE-GIFSNQYAFVSVLRACQEIGSVGILFGRQ 125
Query: 232 IQCLGLKLGFHDHVYVLTGLVSFYSKC-GEVERAELLFRDIVRPDLISCNAMISGYTCNG 290
I L KL + V L+S Y KC G V A F DI + +S N++IS Y+ G
Sbjct: 126 IHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAG 185
Query: 291 KTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNC------------IHSFCL 338
S+ R+F + R P Y FG L T C I
Sbjct: 186 DQRSAFRIFSSMQYDGSR----------PTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQ 235
Query: 339 KSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAIS 398
KSG++++ V + L + +++ + ARK+F++ ++ + N ++ G + EEA
Sbjct: 236 KSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATK 295
Query: 399 LFQEMQASKVAPNPVTVSSILS-----ACAQLGAISLGKWVH-ELVKSRNFESNIYVSTA 452
LF +M S + +P + +LS + A+ + G+ VH ++ + + + +
Sbjct: 296 LFMDMN-SMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNG 354
Query: 453 LIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPS 512
L++MYAKCG+I +AR +F M+ K V+WN+MI+G +G +EA++ + M I P
Sbjct: 355 LVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPG 414
Query: 513 GVTFLSVLYACSHAGLVREGDEI 535
T +S L +C+ + G +I
Sbjct: 415 SFTLISSLSSCASLKWAKLGQQI 437
Score = 68.2 bits (165), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 68/136 (50%), Gaps = 6/136 (4%)
Query: 411 NPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELF 470
N V +S + S GA ++ H + + ++Y+ LI+ Y + G+ V AR++F
Sbjct: 3 NCVPLSFVQSCVGHRGA---ARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVF 59
Query: 471 DLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVR 530
D M ++ V+W ++SGY +G EAL +M+ GI + F+SVL AC G V
Sbjct: 60 DEMPLRNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSV- 118
Query: 531 EGDEIFQSMIHDHGFK 546
+F IH FK
Sbjct: 119 --GILFGRQIHGLMFK 132
Score = 35.4 bits (80), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 37/180 (20%), Positives = 74/180 (41%), Gaps = 8/180 (4%)
Query: 13 LSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDL 72
LS T + + HA + ++D+ + L S YA F ++P +
Sbjct: 626 LSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNS 685
Query: 73 FLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHG 132
+ +N +I G++ + + ++ + ++ + PD+ T+ VLSA S G H
Sbjct: 686 YSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEG-FKHF 744
Query: 133 HAIVSGYGSDLFVG--AALVDLYFKFSWVKSARKVFDKMPEKDTVL-WNSMISGLMKNCC 189
++ YG + + + D+ + + +KMP K VL W +++ CC
Sbjct: 745 ESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGA----CC 800
>sp|Q9SHZ8|PP168_ARATH Pentatricopeptide repeat-containing protein At2g22070
OS=Arabidopsis thaliana GN=PCMP-H41 PE=3 SV=1
Length = 786
Score = 447 bits (1149), Expect = e-124, Method: Compositional matrix adjust.
Identities = 274/761 (36%), Positives = 401/761 (52%), Gaps = 104/761 (13%)
Query: 124 RSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMP------------- 170
R L+H I SG +++ L+++Y K + ARK+FD+MP
Sbjct: 30 RFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSA 89
Query: 171 ------------------EKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDST- 211
++D+V W +MI G + +I V GDMV+ G ++ T
Sbjct: 90 YSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEG---IEPTQ 146
Query: 212 -SVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLF-- 268
++ VL +VA + + G ++ +KLG +V V L++ Y+KCG+ A+ +F
Sbjct: 147 FTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDR 206
Query: 269 ---RDI--------------------------VRPDLISCNAMISGYTCNGKTESSLRLF 299
RDI D+++ N+MISG+ G +L +F
Sbjct: 207 MVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIF 266
Query: 300 RQLLA-SAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSR 358
++L S + T+ ++ L + IHS + +G + VL AL ++YSR
Sbjct: 267 SKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSR 326
Query: 359 LNEMEAARKLFDESSEKSL---------------------------------ASWNAMIA 385
+E AR+L ++ K L +W AMI
Sbjct: 327 CGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIV 386
Query: 386 GYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVH-ELVKSRNFE 444
GY Q+G EAI+LF+ M PN T++++LS + L ++S GK +H VKS
Sbjct: 387 GYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIY 446
Query: 445 SNIYVSTALIDMYAKCGNIVEARELFDLMS-HKSEVTWNTMISGYGLHGHGLEALQLFSE 503
S + VS ALI MYAK GNI A FDL+ + V+W +MI HGH EAL+LF
Sbjct: 447 S-VSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFET 505
Query: 504 MLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAG 563
ML G+RP +T++ V AC+HAGLV +G + F M P HYACMVD+ GRAG
Sbjct: 506 MLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAG 565
Query: 564 QLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSN 623
L++A EFI+ + +EP WG+LL AC +HK+ +L +VA+E+L L+PEN G + L+N
Sbjct: 566 LLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALAN 625
Query: 624 IYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEK 683
+YSA + +AA +R+ +K ++ K G + IEV HVF D HP+ IY ++K
Sbjct: 626 LYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMKK 685
Query: 684 LNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRV 743
+ ++++ G+ +T + LHD+EEE KE +++ HSEKLAIAFGLI+T T +RI+KNLRV
Sbjct: 686 IWDEIKKMGYVPDTASVLHDLEEEVKEQILRHHSEKLAIAFGLISTPDKTTLRIMKNLRV 745
Query: 744 CLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
C DCHTA KFISK+ GR I+VRD RFHHFK G CSC DYW
Sbjct: 746 CNDCHTAIKFISKLVGREIIVRDTTRFHHFKDGFCSCRDYW 786
Score = 151 bits (381), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 128/517 (24%), Positives = 224/517 (43%), Gaps = 71/517 (13%)
Query: 42 STVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKN 101
+TV + D +TC F +P+ D + +I G+ N +I + K
Sbjct: 84 NTVLSAYSKRGDMDSTC---EFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKE 140
Query: 102 TALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKS 161
+ P FT + VL++ +A G +H + G ++ V +L+++Y K
Sbjct: 141 -GIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMM 199
Query: 162 ARKVFDKMPEKDTVLW-------------------------------NSMISGLMKNCCF 190
A+ VFD+M +D W NSMISG +
Sbjct: 200 AKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYD 259
Query: 191 QDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTG 250
++ +F M+R+ D ++A+VL A A +++L +G +I + GF VL
Sbjct: 260 LRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNA 319
Query: 251 LVSFYSKCGEVERAELL---------------------------------FRDIVRPDLI 277
L+S YS+CG VE A L F + D++
Sbjct: 320 LISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVV 379
Query: 278 SCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFC 337
+ AMI GY +G ++ LFR ++ +R NS T+ ++ V L IH
Sbjct: 380 AWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSA 439
Query: 338 LKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDE-SSEKSLASWNAMIAGYTQNGLTEEA 396
+KSG + + SV AL T+Y++ + +A + FD E+ SW +MI Q+G EEA
Sbjct: 440 VKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEA 499
Query: 397 ISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRN-FESNIYVSTALID 455
+ LF+ M + P+ +T + SAC G ++ G+ +++K + + ++D
Sbjct: 500 LELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVD 559
Query: 456 MYAKCGNIVEARELFDLMSHKSE-VTWNTMISGYGLH 491
++ + G + EA+E + M + + VTW +++S +H
Sbjct: 560 LFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVH 596
Score = 113 bits (283), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 113/453 (24%), Positives = 197/453 (43%), Gaps = 87/453 (19%)
Query: 60 ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
A A F + + D+ +N +I GF+ ++ ++ + +++ L+PD FT + VLSA +
Sbjct: 231 AMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACA 290
Query: 120 ACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARK--------------- 164
IG +H H + +G+ V AL+ +Y + V++AR+
Sbjct: 291 NLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGF 350
Query: 165 ------------------VFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGT 206
+F + ++D V W +MI G ++ + ++I +F MV GG
Sbjct: 351 TALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMV-GGGQ 409
Query: 207 WLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAEL 266
+S ++AA+L + + L G +I +K G V V L++ Y+K G + A
Sbjct: 410 RPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASR 469
Query: 267 LFRDIVR--PDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPF 324
F D++R D +S +MI +G E +L LF +L R + T VG
Sbjct: 470 AF-DLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVG-------- 520
Query: 325 GHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSE-----KSLAS 379
+ S C +G+V+ R+ FD + +L+
Sbjct: 521 --------VFSACTHAGLVNQ-------------------GRQYFDMMKDVDKIIPTLSH 553
Query: 380 WNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHE--- 436
+ M+ + + GL +EA ++M + P+ VT S+LSAC I LGK E
Sbjct: 554 YACMVDLFGRAGLLQEAQEFIEKM---PIEPDVVTWGSLLSACRVHKNIDLGKVAAERLL 610
Query: 437 LVKSRNFESNIYVSTALIDMYAKCGNIVEAREL 469
L++ N S Y +AL ++Y+ CG EA ++
Sbjct: 611 LLEPEN--SGAY--SALANLYSACGKWEEAAKI 639
Score = 60.1 bits (144), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 106/242 (43%), Gaps = 41/242 (16%)
Query: 409 APNPVTVSSILSACAQLGAISL----GKWVHELVKSRNFES----NIYVSTALIDMYAKC 460
AP P+++S++L C L S+ G++ +LV R +S ++Y+ L+++Y+K
Sbjct: 3 APVPLSLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKT 62
Query: 461 GNIVEARELFDLMSHKSEVTWNTMIS-------------------------------GYG 489
G + AR+LFD M ++ +WNT++S GY
Sbjct: 63 GYALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYK 122
Query: 490 LHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLA 549
G +A+++ +M+ GI P+ T +VL + + + G ++ S I G +
Sbjct: 123 NIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKV-HSFIVKLGLRGNV 181
Query: 550 EHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFE 609
++++ + G A +F+ V + W A++ M +LA E++ E
Sbjct: 182 SVSNSLLNMYAKCGDPMMA-KFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAE 240
Query: 610 LD 611
D
Sbjct: 241 RD 242
>sp|O49619|PP350_ARATH Pentatricopeptide repeat-containing protein At4g35130,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H27 PE=3
SV=1
Length = 804
Score = 445 bits (1145), Expect = e-124, Method: Compositional matrix adjust.
Identities = 245/743 (32%), Positives = 414/743 (55%), Gaps = 7/743 (0%)
Query: 44 VTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTA 103
+T+ +D + A LF + K D FL+NV+I+GF++ + ++ FY+ +
Sbjct: 67 LTRALRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRM-VFAG 125
Query: 104 LTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSAR 163
+ D FTY FV+ + + G +H I G+ SD++V +L+ LY K A
Sbjct: 126 VKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAE 185
Query: 164 KVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEV 223
KVF++MPE+D V WNSMISG + S+ +F +M++ G D S + L A + V
Sbjct: 186 KVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFK-PDRFSTMSALGACSHV 244
Query: 224 QELRLGMEIQCLGLKLGFHD-HVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAM 282
++G EI C ++ V V+T ++ YSK GEV AE +F +++ ++++ N M
Sbjct: 245 YSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVM 304
Query: 283 ISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGI 342
I Y NG+ + F+++ S + ++ I + P + IH + ++ G
Sbjct: 305 IGCYARNGRVTDAFLCFQKM--SEQNGLQPDVITSINLL-PASAILEGRTIHGYAMRRGF 361
Query: 343 VSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQE 402
+ + + TAL +Y ++++A +FD +EK++ SWN++IA Y QNG A+ LFQE
Sbjct: 362 LPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQE 421
Query: 403 MQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGN 462
+ S + P+ T++SIL A A+ ++S G+ +H + + SN + +L+ MYA CG+
Sbjct: 422 LWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGD 481
Query: 463 IVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYA 522
+ +AR+ F+ + K V+WN++I Y +HG G ++ LFSEM+ S + P+ TF S+L A
Sbjct: 482 LEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAA 541
Query: 523 CSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPA 582
CS +G+V EG E F+SM ++G P EHY CM+D++GR G A F++ + P
Sbjct: 542 CSISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTAR 601
Query: 583 VWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVK 642
+WG+LL A HKD +A A+E++F+++ +N G +VLL N+Y+ + ++ +++
Sbjct: 602 IWGSLLNASRNHKDITIAEFAAEQIFKMEHDNTGCYVLLLNMYAEAGRWEDVNRIKLLME 661
Query: 643 KRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALH 702
+ +++ + +E G HVFT+GD+ H + IY +L+ ++ + E V+ L
Sbjct: 662 SKGISRTSSRSTVEAKGKSHVFTNGDRSHVATNKIYEVLDVVSRMVGEEDIYVHCVSRLR 721
Query: 703 -DVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRV 761
+ + + + HS +LA FGLI+TE G + + N R+C CH + S++T R
Sbjct: 722 PETLVKSRSNSPRRHSVRLATCFGLISTETGRRVTVRNNTRICRKCHEFLEKASRLTRRE 781
Query: 762 IVVRDANRFHHFKGGVCSCGDYW 784
IVV D+ FHHF G CSCG+YW
Sbjct: 782 IVVGDSKIFHHFSNGRCSCGNYW 804
Score = 127 bits (319), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 145/279 (51%), Gaps = 5/279 (1%)
Query: 40 DLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLR 99
D+ +T + S + YA +F + + ++ +NV+I ++ N + + +
Sbjct: 266 DVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMS 325
Query: 100 KNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWV 159
+ L PD T S L ASA + G +HG+A+ G+ + + AL+D+Y + +
Sbjct: 326 EQNGLQPDVIT-SINLLPASAILE---GRTIHGYAMRRGFLPHMVLETALIDMYGECGQL 381
Query: 160 KSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPA 219
KSA +FD+M EK+ + WNS+I+ ++N ++ +F ++ + DST++A++LPA
Sbjct: 382 KSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELW-DSSLVPDSTTIASILPA 440
Query: 220 VAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISC 279
AE L G EI +K + + +L LV Y+ CG++E A F I+ D++S
Sbjct: 441 YAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVSW 500
Query: 280 NAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLI 318
N++I Y +G S+ LF +++AS N ST L+
Sbjct: 501 NSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLL 539
>sp|Q0WN60|PPR48_ARATH Pentatricopeptide repeat-containing protein At1g18485
OS=Arabidopsis thaliana GN=PCMP-H8 PE=2 SV=2
Length = 970
Score = 444 bits (1143), Expect = e-124, Method: Compositional matrix adjust.
Identities = 251/730 (34%), Positives = 390/730 (53%), Gaps = 5/730 (0%)
Query: 60 ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRK---NTALTPDNFTYSFVLS 116
A LF +P+ +L +N +IR FS+N + S + + + A PD T VL
Sbjct: 241 ALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLP 300
Query: 117 AASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVL 176
+ + +G +HG A+ +L + AL+D+Y K + +A+ +F K+ V
Sbjct: 301 VCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVS 360
Query: 177 WNSMISGLMKNCCFQDSIWVFGDMVRNG-GTWLDSTSVAAVLPAVAEVQELRLGMEIQCL 235
WN+M+ G + V M+ G D ++ +P L E+ C
Sbjct: 361 WNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCY 420
Query: 236 GLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESS 295
LK F + V V+ Y+KCG + A+ +F I + S NA+I G+ + S
Sbjct: 421 SLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLS 480
Query: 296 LRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTV 355
L Q+ S +S T+ L+ L L +H F +++ + + V ++ ++
Sbjct: 481 LDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSL 540
Query: 356 YSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTV 415
Y E+ + LFD +KSL SWN +I GY QNG + A+ +F++M + +++
Sbjct: 541 YIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISM 600
Query: 416 SSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSH 475
+ AC+ L ++ LG+ H E + +++ +LIDMYAK G+I ++ ++F+ +
Sbjct: 601 MPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKE 660
Query: 476 KSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEI 535
KS +WN MI GYG+HG EA++LF EM +G P +TFL VL AC+H+GL+ EG
Sbjct: 661 KSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRY 720
Query: 536 FQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFI-KGLAVEPGPAVWGALLGACMIH 594
M G KP +HYAC++D+LGRAGQL+KAL + + ++ E +W +LL +C IH
Sbjct: 721 LDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIH 780
Query: 595 KDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTL 654
++ + + KLFEL+PE +VLLSN+Y+ + VRQ + + L K GC+
Sbjct: 781 QNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSW 840
Query: 655 IEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMK 714
IE+ F G++ I ++ L K+ + G++ +T++ HD+ EEEK ++
Sbjct: 841 IELNRKVFSFVVGERFLDGFEEIKSLWSILEMKISKMGYRPDTMSVQHDLSEEEKIEQLR 900
Query: 715 VHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFK 774
HSEKLA+ +GLI T GT IR+ KNLR+C+DCH A K ISKV R IVVRD RFHHFK
Sbjct: 901 GHSEKLALTYGLIKTSEGTTIRVYKNLRICVDCHNAAKLISKVMEREIVVRDNKRFHHFK 960
Query: 775 GGVCSCGDYW 784
GVCSCGDYW
Sbjct: 961 NGVCSCGDYW 970
Score = 282 bits (721), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 175/559 (31%), Positives = 291/559 (52%), Gaps = 19/559 (3%)
Query: 60 ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
+R +F ++ +LF +N +I +S NE+ + + + T L PD+FTY V+ A +
Sbjct: 139 SRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACA 198
Query: 120 ACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNS 179
D IG+ +HG + +G D+FVG ALV Y +V A ++FD MPE++ V WNS
Sbjct: 199 GMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNS 258
Query: 180 MISGLMKNCCFQDSIWVFGDMVR---NGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLG 236
MI N ++S + G+M+ +G D ++ VLP A +E+ LG +
Sbjct: 259 MIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWA 318
Query: 237 LKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSL 296
+KL + + L+ YSKCG + A+++F+ +++S N M+ G++ G T +
Sbjct: 319 VKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTF 378
Query: 297 RLFRQLLASAERVNSS--TIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALST 354
+ RQ+LA E V + TI+ +PV + L +H + LK V N V A
Sbjct: 379 DVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVA 438
Query: 355 VYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVT 414
Y++ + A+++F K++ SWNA+I G+ Q+ ++ +M+ S + P+ T
Sbjct: 439 SYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFT 498
Query: 415 VSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMS 474
V S+LSAC++L ++ LGK VH + E +++V +++ +Y CG + + LFD M
Sbjct: 499 VCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAME 558
Query: 475 HKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDE 534
KS V+WNT+I+GY +G AL +F +M+ GI+ G++ + V ACS +R G E
Sbjct: 559 DKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGRE 618
Query: 535 IFQSMIHDHGFKPLAEH---YAC-MVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGA 590
H + K L E AC ++D+ + G + ++ + GL E A W A++
Sbjct: 619 -----AHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLK-EKSTASWNAMIMG 672
Query: 591 CMIHKDTNLARVASEKLFE 609
IH LA+ A KLFE
Sbjct: 673 YGIH---GLAKEAI-KLFE 687
Score = 146 bits (369), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 111/422 (26%), Positives = 199/422 (47%), Gaps = 16/422 (3%)
Query: 133 HAIVSG---YGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCC 189
H +VSG +D + ++ +Y +R VFD + K+ WN++IS +N
Sbjct: 107 HQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNEL 166
Query: 190 FQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLT 249
+ + + F +M+ D + V+ A A + ++ +G+ + L +K G + V+V
Sbjct: 167 YDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGN 226
Query: 250 GLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLAS---- 305
LVSFY G V A LF + +L+S N+MI ++ NG +E S L +++
Sbjct: 227 ALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDG 286
Query: 306 AERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAA 365
A + +T+V ++PV + L +H + +K + + AL +YS+ + A
Sbjct: 287 AFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNA 346
Query: 366 RKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQA--SKVAPNPVTVSSILSACA 423
+ +F ++ K++ SWN M+ G++ G T + ++M A V + VT+ + + C
Sbjct: 347 QMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCF 406
Query: 424 QLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNT 483
+ K +H + F N V+ A + YAKCG++ A+ +F + K+ +WN
Sbjct: 407 HESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNA 466
Query: 484 MISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDH 543
+I G+ +L +M SG+ P T S+L ACS +R G E+ H
Sbjct: 467 LIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEV-------H 519
Query: 544 GF 545
GF
Sbjct: 520 GF 521
>sp|Q9FJY7|PP449_ARATH Pentatricopeptide repeat-containing protein At5g66520
OS=Arabidopsis thaliana GN=PCMP-H61 PE=2 SV=1
Length = 620
Score = 444 bits (1143), Expect = e-123, Method: Compositional matrix adjust.
Identities = 237/605 (39%), Positives = 345/605 (57%), Gaps = 38/605 (6%)
Query: 215 AVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSF---YSKCGEVERAELLFRDI 271
+ L ++ +EL+ +I LK G Y +T +SF + + A+++F
Sbjct: 19 SCLQRCSKQEELK---QIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGF 75
Query: 272 VRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTN 331
RPD N MI G++C+ + E SL L++++L S+ N+ T L+ T
Sbjct: 76 DRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETT 135
Query: 332 CIHSFCLKSGIVSNSSVLTALSTVYS-------------------------------RLN 360
IH+ K G ++ + +L Y+ +
Sbjct: 136 QIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAG 195
Query: 361 EMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILS 420
+M+ A LF + +EK+ SW MI+GY Q + +EA+ LF EMQ S V P+ V++++ LS
Sbjct: 196 KMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALS 255
Query: 421 ACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVT 480
ACAQLGA+ GKW+H + + + LIDMYAKCG + EA E+F + KS
Sbjct: 256 ACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQA 315
Query: 481 WNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMI 540
W +ISGY HGHG EA+ F EM GI+P+ +TF +VL ACS+ GLV EG IF SM
Sbjct: 316 WTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSME 375
Query: 541 HDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLA 600
D+ KP EHY C+VD+LGRAG L++A FI+ + ++P +WGALL AC IHK+ L
Sbjct: 376 RDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELG 435
Query: 601 RVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGT 660
E L +DP + G +V +NI++ ++ + +AA R+++K++ +AK PGC+ I + GT
Sbjct: 436 EEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISLEGT 495
Query: 661 PHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHD-VEEEEKELMMKVHSEK 719
H F +GD+ HP+ I + + K+ E G+ E L D V+++E+E ++ HSEK
Sbjct: 496 THEFLAGDRSHPEIEKIQSKWRIMRRKLEENGYVPELEEMLLDLVDDDEREAIVHQHSEK 555
Query: 720 LAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCS 779
LAI +GLI T+PGT IRI+KNLRVC DCH TK ISK+ R IV+RD RFHHF+ G CS
Sbjct: 556 LAITYGLIKTKPGTIIRIMKNLRVCKDCHKVTKLISKIYKRDIVMRDRTRFHHFRDGKCS 615
Query: 780 CGDYW 784
CGDYW
Sbjct: 616 CGDYW 620
Score = 137 bits (344), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 97/364 (26%), Positives = 173/364 (47%), Gaps = 36/364 (9%)
Query: 162 ARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVA 221
A+ VFD DT LWN MI G + + S+ ++ M+ + ++ + ++L A +
Sbjct: 68 AQIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPH-NAYTFPSLLKACS 126
Query: 222 EVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNA 281
+ +I KLG+ + VY + L++ Y+ G + A LLF I PD +S N+
Sbjct: 127 NLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNS 186
Query: 282 MISGYTCNGKTESSLRLFRQLLASAERVNSSTIVG----------LIPVFYP-------- 323
+I GY GK + +L LFR+ +A ++ +T++ + +F+
Sbjct: 187 VIKGYVKAGKMDIALTLFRK-MAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEP 245
Query: 324 --------------FGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLF 369
G L IHS+ K+ I +S + L +Y++ EME A ++F
Sbjct: 246 DNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVF 305
Query: 370 DESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAIS 429
+KS+ +W A+I+GY +G EAIS F EMQ + PN +T +++L+AC+ G +
Sbjct: 306 KNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVE 365
Query: 430 LGKWV-HELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHK-SEVTWNTMISG 487
GK + + + + N + I ++D+ + G + EA+ M K + V W ++
Sbjct: 366 EGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKA 425
Query: 488 YGLH 491
+H
Sbjct: 426 CRIH 429
Score = 128 bits (321), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 128/506 (25%), Positives = 217/506 (42%), Gaps = 87/506 (17%)
Query: 10 NLF--LSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTK-----LAHRLSDFKATCYARA 62
NL+ +S L+ Q +L Q HA+++ G D +TK ++ SDF YA+
Sbjct: 13 NLYETMSCLQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLP--YAQI 70
Query: 63 LFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDN-FTYSFVLSAASAC 121
+F +PD FL+N++IRGFS ++ P+ S+ Y + ++A P N +T+ +L A S
Sbjct: 71 VFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSA--PHNAYTFPSLLKACSNL 128
Query: 122 CDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMI 181
+H GY +D++ +L++ Y K A +FD++PE D V WNS+I
Sbjct: 129 SAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVI 188
Query: 182 SGLMKNCCFQDSIWVFGDMV-RNGGTWL-----------------------------DST 211
G +K ++ +F M +N +W D+
Sbjct: 189 KGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNV 248
Query: 212 SVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDI 271
S+A L A A++ L G I K + L+ Y+KCGE+E A +F++I
Sbjct: 249 SLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNI 308
Query: 272 VRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTN 331
+ + + A+ISGY +G ++ F ++
Sbjct: 309 KKKSVQAWTALISGYAYHGHGREAISKFMEM----------------------------- 339
Query: 332 CIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLF-----DESSEKSLASWNAMIAG 386
+K +++ ++VLTA S Y+ L +E + +F D + + ++ + ++
Sbjct: 340 --QKMGIKPNVITFTAVLTACS--YTGL--VEEGKLIFYSMERDYNLKPTIEHYGCIVDL 393
Query: 387 YTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHE-LVKSRNFES 445
+ GL +EA QEM + PN V ++L AC I LG+ + E L+ +
Sbjct: 394 LGRAGLLDEAKRFIQEM---PLKPNAVIWGALLKACRIHKNIELGEEIGEILIAIDPYHG 450
Query: 446 NIYVSTALID-MYAKCGNIVEARELF 470
YV A I M K E R L
Sbjct: 451 GRYVHKANIHAMDKKWDKAAETRRLM 476
Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 99/233 (42%), Gaps = 35/233 (15%)
Query: 6 PQSRNLFLSLLKGAKTQS---QLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARA 62
P + F SLLK S + TQ HAQI G++ND+ V L + + A
Sbjct: 112 PHNAYTFPSLLKACSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHL 171
Query: 63 LFFSIPKPDLFLFNVIIRGFS-------------------------------NNEMPKSS 91
LF IP+PD +N +I+G+ +M K +
Sbjct: 172 LFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEA 231
Query: 92 ICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVD 151
+ + H +N+ + PDN + + LSA + G +H + + D +G L+D
Sbjct: 232 LQLF-HEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLID 290
Query: 152 LYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNG 204
+Y K ++ A +VF + +K W ++ISG + +++I F +M + G
Sbjct: 291 MYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMG 343
>sp|A8MQA3|PP330_ARATH Pentatricopeptide repeat-containing protein At4g21065
OS=Arabidopsis thaliana GN=PCMP-H28 PE=2 SV=2
Length = 595
Score = 444 bits (1142), Expect = e-123, Method: Compositional matrix adjust.
Identities = 219/524 (41%), Positives = 332/524 (63%), Gaps = 3/524 (0%)
Query: 264 AELLFRDIVRP-DLISCNAMISGYTCNGKTESSLRLFRQLLASA-ERVNSSTIVGLIPVF 321
A +F I +P ++ N +I GY G + S+ L+R++ S ++ T LI
Sbjct: 72 AHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAV 131
Query: 322 YPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWN 381
+ L IHS ++SG S V +L +Y+ ++ +A K+FD+ EK L +WN
Sbjct: 132 TTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWN 191
Query: 382 AMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSR 441
++I G+ +NG EEA++L+ EM + + P+ T+ S+LSACA++GA++LGK VH +
Sbjct: 192 SVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKV 251
Query: 442 NFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLF 501
N++ S L+D+YA+CG + EA+ LFD M K+ V+W ++I G ++G G EA++LF
Sbjct: 252 GLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELF 311
Query: 502 SEMLHS-GIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILG 560
M + G+ P +TF+ +LYACSH G+V+EG E F+ M ++ +P EH+ CMVD+L
Sbjct: 312 KYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLA 371
Query: 561 RAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVL 620
RAGQ++KA E+IK + ++P +W LLGAC +H D++LA A ++ +L+P + G +VL
Sbjct: 372 RAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVL 431
Query: 621 LSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAM 680
LSN+Y++E+ + +R+ + + + K PG +L+EVG H F GD+ HPQS AIYA
Sbjct: 432 LSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAK 491
Query: 681 LEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKN 740
L+++ G++R G+ + DVEEEEKE + HSEK+AIAF LI+T + I ++KN
Sbjct: 492 LKEMTGRLRSEGYVPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKN 551
Query: 741 LRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
LRVC DCH A K +SKV R IVVRD +RFHHFK G CSC DYW
Sbjct: 552 LRVCADCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 595
Score = 156 bits (395), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 122/448 (27%), Positives = 216/448 (48%), Gaps = 43/448 (9%)
Query: 18 GAKTQSQLTQTHAQIIIHGFQ-NDLSTVTKLAHRLSDFKAT---CYARALFFSIPKP-DL 72
G + ++L Q HA I HG +D L L + YA +F I KP ++
Sbjct: 26 GVSSITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKIEKPINV 85
Query: 73 FLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHG 132
F++N +IRG++ S+ Y +R + + PD TY F++ A + D +G +H
Sbjct: 86 FIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHS 145
Query: 133 HAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQD 192
I SG+GS ++V +L+ LY V SA KVFDKMPEKD V WNS+I+G +N ++
Sbjct: 146 VVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEE 205
Query: 193 SIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLV 252
++ ++ +M + G D ++ ++L A A++ L LG + +K+G +++ L+
Sbjct: 206 ALALYTEM-NSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLL 264
Query: 253 SFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSS 312
Y++CG VE A+ LF ++V + +S ++I G NG + ++ LF+ + ++
Sbjct: 265 DLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTE------ 318
Query: 313 TIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDES 372
GL+P F + L C H +K G E R++ +E
Sbjct: 319 ---GLLPCEITFVGI-LYACSHCGMVKEG--------------------FEYFRRMREEY 354
Query: 373 S-EKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLG 431
E + + M+ + G ++A ++ +++ + PN V ++L AC G L
Sbjct: 355 KIEPRIEHFGCMVDLLARAGQVKKA---YEYIKSMPMQPNVVIWRTLLGACTVHGDSDLA 411
Query: 432 KWVH-ELVKSRNFESNIYVSTALIDMYA 458
++ ++++ S YV L +MYA
Sbjct: 412 EFARIQILQLEPNHSGDYV--LLSNMYA 437
Score = 156 bits (394), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 114/403 (28%), Positives = 198/403 (49%), Gaps = 24/403 (5%)
Query: 162 ARKVFDKMPEKDTV-LWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAV 220
A KVF K+ + V +WN++I G + + ++ +M +G D+ + ++ AV
Sbjct: 72 AHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAV 131
Query: 221 AEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCN 280
+ ++RLG I + ++ GF +YV L+ Y+ CG+V A +F + DL++ N
Sbjct: 132 TTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWN 191
Query: 281 AMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKS 340
++I+G+ NGK E +L L+ ++ + + + TIV L+ G L L +H + +K
Sbjct: 192 SVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKV 251
Query: 341 GIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLF 400
G+ N L +Y+R +E A+ LFDE +K+ SW ++I G NG +EAI LF
Sbjct: 252 GLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELF 311
Query: 401 QEMQASK-VAPNPVTVSSILSACAQLGAISLG-KWVHELVKSRNFESNIYVSTALIDMYA 458
+ M++++ + P +T IL AC+ G + G ++ + + E I ++D+ A
Sbjct: 312 KYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLA 371
Query: 459 KCGNIVEARELFDLMSHKSEVT-WNTMISGYGLHGHG-------LEALQLFSEMLHSGIR 510
+ G + +A E M + V W T++ +HG ++ LQL E HSG
Sbjct: 372 RAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQL--EPNHSG-- 427
Query: 511 PSGVTFLSVLYACSHAGLVREGD--EIFQSMIHDHGFKPLAEH 551
LS +YA R D +I + M+ D G K + H
Sbjct: 428 --DYVLLSNMYASEQ----RWSDVQKIRKQMLRD-GVKKVPGH 463
>sp|Q9M1V3|PP296_ARATH Pentatricopeptide repeat-containing protein At3g63370
OS=Arabidopsis thaliana GN=PCMP-H83 PE=2 SV=2
Length = 960
Score = 444 bits (1142), Expect = e-123, Method: Compositional matrix adjust.
Identities = 261/789 (33%), Positives = 427/789 (54%), Gaps = 15/789 (1%)
Query: 5 TPQSRNLFLSLLKGAKTQSQL---TQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYAR 61
P + F +LLK + ++ H+ ++ G+ + V L + AR
Sbjct: 178 VPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAAR 237
Query: 62 ALFFSI-PKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASA 120
LF K D L+N I+ +S + ++ + + T P+++T L+A
Sbjct: 238 RLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHM-TGPAPNSYTIVSALTACDG 296
Query: 121 CCDRSIGVLLHGHAIVSG-YGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNS 179
+G +H + S + S+L+V AL+ +Y + + A ++ +M D V WNS
Sbjct: 297 FSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNS 356
Query: 180 MISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKL 239
+I G ++N +++++ F DM+ G D S+ +++ A + L GME+ +K
Sbjct: 357 LIKGYVQNLMYKEALEFFSDMIAAGHK-SDEVSMTSIIAASGRLSNLLAGMELHAYVIKH 415
Query: 240 GFHDHVYVLTGLVSFYSKCG---EVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSL 296
G+ ++ V L+ YSKC + RA L D DLIS +I+GY N +L
Sbjct: 416 GWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHD---KDLISWTTVIAGYAQNDCHVEAL 472
Query: 297 RLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVY 356
LFR + ++ + ++ + + IH L+ G++ ++ + L VY
Sbjct: 473 ELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLL-DTVIQNELVDVY 531
Query: 357 SRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVS 416
+ M A ++F+ K + SW +MI+ NG EA+ LF+ M + ++ + V +
Sbjct: 532 GKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALL 591
Query: 417 SILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHK 476
ILSA A L A++ G+ +H + + F ++ A++DMYA CG++ A+ +FD + K
Sbjct: 592 CILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERK 651
Query: 477 SEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIF 536
+ + +MI+ YG+HG G A++LF +M H + P ++FL++LYACSHAGL+ EG
Sbjct: 652 GLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFL 711
Query: 537 QSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKD 596
+ M H++ +P EHY C+VD+LGRA + +A EF+K + EP VW ALL AC H +
Sbjct: 712 KIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSE 771
Query: 597 TNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIE 656
+ +A+++L EL+P+N G VL+SN+++ + + VR +K + K PGC+ IE
Sbjct: 772 KEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIE 831
Query: 657 VGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKM-REAGFQTETVTALHDVEEEEKELMMKV 715
+ G H FT+ D+ HP+S IY L ++ K+ RE G+ +T LH+V+E EK M+
Sbjct: 832 MDGKVHKFTARDKSHPESKEIYEKLSEVTRKLEREVGYVADTKFVLHNVDEGEKVQMLHG 891
Query: 716 HSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKG 775
HSE++AIA+GL+ T +RI KNLRVC DCHT K +SK+ R IV+RDANRFHHF+
Sbjct: 892 HSERIAIAYGLLRTPDRACLRITKNLRVCRDCHTFCKLVSKLFRRDIVMRDANRFHHFES 951
Query: 776 GVCSCGDYW 784
G+CSCGD W
Sbjct: 952 GLCSCGDSW 960
Score = 194 bits (492), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 132/450 (29%), Positives = 229/450 (50%), Gaps = 30/450 (6%)
Query: 144 FVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRN 203
F+ LV +Y K + A KVFD+MP++ WN+MI + N ++ ++ +M R
Sbjct: 117 FLAGKLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNM-RV 175
Query: 204 GGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVER 263
G L +S A+L A A+++++R G E+ L +KLG+H +++ LVS Y+K ++
Sbjct: 176 EGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSA 235
Query: 264 AELLFRDIV-RPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFY 322
A LF + D + N+++S Y+ +GK+ +L LFR++ + NS TIV +
Sbjct: 236 ARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACD 295
Query: 323 PFGHLHLTNCIHSFCLKSGIVSNS-SVLTALSTVYSRLNEMEAARKLFDESSEKSLASWN 381
F + L IH+ LKS S+ V AL +Y+R +M A ++ + + + +WN
Sbjct: 296 GFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWN 355
Query: 382 AMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSR 441
++I GY QN + +EA+ F +M A+ + V+++SI++A +L + G +H V
Sbjct: 356 SLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKH 415
Query: 442 NFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLF 501
++SN+ V LIDMY+KC F M K ++W T+I+GY + +EAL+LF
Sbjct: 416 GWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELF 475
Query: 502 SEMLHSGIRPSGVTFLSVLYACS-----------HAGLVREGDEIFQSMIHDHGFKPLAE 550
++ + + S+L A S H ++R+G + ++I +
Sbjct: 476 RDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKG--LLDTVIQNE------- 526
Query: 551 HYACMVDILGRA---GQLEKALEFIKGLAV 577
+VD+ G+ G + E IKG V
Sbjct: 527 ----LVDVYGKCRNMGYATRVFESIKGKDV 552
Score = 73.2 bits (178), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 95/203 (46%), Gaps = 7/203 (3%)
Query: 390 NGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSR--NFESNI 447
+G+ EA FQ + S+ + +L C + A+S G+ +H + +FE +
Sbjct: 61 DGVLTEA---FQRLDVSENNSPVEAFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELD- 116
Query: 448 YVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHS 507
+++ L+ MY KCG++ +A ++FD M ++ WNTMI Y +G AL L+ M
Sbjct: 117 FLAGKLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVE 176
Query: 508 GIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEK 567
G+ +F ++L AC+ +R G E+ S++ G+ +V + + L
Sbjct: 177 GVPLGLSSFPALLKACAKLRDIRSGSEL-HSLLVKLGYHSTGFIVNALVSMYAKNDDLSA 235
Query: 568 ALEFIKGLAVEPGPAVWGALLGA 590
A G + +W ++L +
Sbjct: 236 ARRLFDGFQEKGDAVLWNSILSS 258
>sp|Q9LYV3|PP377_ARATH Putative pentatricopeptide repeat-containing protein At5g13230,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H89 PE=3
SV=1
Length = 822
Score = 443 bits (1140), Expect = e-123, Method: Compositional matrix adjust.
Identities = 265/735 (36%), Positives = 403/735 (54%), Gaps = 25/735 (3%)
Query: 60 ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHL-RKNTALTPDNFTYSFV---- 114
A LF +P+ + F + +G++ + I Y+ L R+ L P FT SF+
Sbjct: 103 ALNLFDEMPERNNVSFVTLAQGYA----CQDPIGLYSRLHREGHELNPHVFT-SFLKLFV 157
Query: 115 -LSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKD 173
L A C LH + GY S+ FVGAAL++ Y V SAR VF+ + KD
Sbjct: 158 SLDKAEIC------PWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKD 211
Query: 174 TVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQ 233
V+W ++S ++N F+DS+ + M R G ++ + L A + +
Sbjct: 212 IVVWAGIVSCYVENGYFEDSLKLLSCM-RMAGFMPNNYTFDTALKASIGLGAFDFAKGVH 270
Query: 234 CLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTE 293
LK + V GL+ Y++ G++ A +F ++ + D++ + MI+ + NG
Sbjct: 271 GQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCN 330
Query: 294 SSLRLF---RQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLT 350
++ LF R+ S+I+ + G L +H +K G + V
Sbjct: 331 EAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSG---LGEQLHGLVVKVGFDLDIYVSN 387
Query: 351 ALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAP 410
AL VY++ +M+ A KLF E S K+ SWN +I GY G +A S+F+E ++V+
Sbjct: 388 ALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSV 447
Query: 411 NPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELF 470
VT SS L ACA L ++ LG VH L N + VS +LIDMYAKCG+I A+ +F
Sbjct: 448 TEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVF 507
Query: 471 DLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVR 530
+ M +WN +ISGY HG G +AL++ M +P+G+TFL VL CS+AGL+
Sbjct: 508 NEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLID 567
Query: 531 EGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGA 590
+G E F+SMI DHG +P EHY CMV +LGR+GQL+KA++ I+G+ EP +W A+L A
Sbjct: 568 QGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSA 627
Query: 591 CMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAP 650
M + AR ++E++ +++P++ +VL+SN+Y+ + + A++R+ +K+ + K P
Sbjct: 628 SMNQNNEEFARRSAEEILKINPKDEATYVLVSNMYAGAKQWANVASIRKSMKEMGVKKEP 687
Query: 651 GCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKE 710
G + IE G H F+ G HP I MLE LN K AG+ + L D+++EEK+
Sbjct: 688 GLSWIEHQGDVHYFSVGLSDHPDMKLINGMLEWLNMKATRAGYVPDRNAVLLDMDDEEKD 747
Query: 711 LMMKVHSEKLAIAFGLIATEPG-TEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANR 769
+ VHSE+LA+A+GL+ I I+KNLR+C DCH+A K IS + R +V+RD NR
Sbjct: 748 KRLWVHSERLALAYGLVRMPSSRNRILIMKNLRICSDCHSAMKVISSIVQRDLVIRDMNR 807
Query: 770 FHHFKGGVCSCGDYW 784
FHHF GVCSCGD+W
Sbjct: 808 FHHFHAGVCSCGDHW 822
Score = 203 bits (517), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 141/465 (30%), Positives = 229/465 (49%), Gaps = 7/465 (1%)
Query: 130 LHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCC 189
+H + G DLF L++ Y K + K A +FD+MPE++ V + ++ G C
Sbjct: 71 IHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQGY---AC 127
Query: 190 FQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLT 249
QD I ++ + R G L+ + L + + + + +KLG+ + +V
Sbjct: 128 -QDPIGLYSRLHREGHE-LNPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGA 185
Query: 250 GLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERV 309
L++ YS CG V+ A +F I+ D++ ++S Y NG E SL+L + +
Sbjct: 186 ALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMP 245
Query: 310 NSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLF 369
N+ T + G +H LK+ V + V L +Y++L +M A K+F
Sbjct: 246 NNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVF 305
Query: 370 DESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAIS 429
+E + + W+ MIA + QNG EA+ LF M+ + V PN T+SSIL+ CA
Sbjct: 306 NEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSG 365
Query: 430 LGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYG 489
LG+ +H LV F+ +IYVS ALID+YAKC + A +LF +S K+EV+WNT+I GY
Sbjct: 366 LGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYE 425
Query: 490 LHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLA 549
G G +A +F E L + + + VTF S L AC+ + G ++ I + K +A
Sbjct: 426 NLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVA 485
Query: 550 EHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIH 594
+ ++D+ + G ++ A + A W AL+ H
Sbjct: 486 VSNS-LIDMYAKCGDIKFAQSVFNEMET-IDVASWNALISGYSTH 528
Score = 112 bits (280), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/369 (23%), Positives = 164/369 (44%), Gaps = 5/369 (1%)
Query: 208 LDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELL 267
LDS + A+L + + I C LK G ++ L++ Y K G + A L
Sbjct: 47 LDSHAYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNL 106
Query: 268 FRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHL 327
F ++ + +S + GY C + + L+ +L +N + +F
Sbjct: 107 FDEMPERNNVSFVTLAQGYAC----QDPIGLYSRLHREGHELNPHVFTSFLKLFVSLDKA 162
Query: 328 HLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGY 387
+ +HS +K G SN+ V AL YS +++AR +F+ K + W +++ Y
Sbjct: 163 EICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCY 222
Query: 388 TQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNI 447
+NG E+++ L M+ + PN T + L A LGA K VH + + +
Sbjct: 223 VENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDP 282
Query: 448 YVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHS 507
V L+ +Y + G++ +A ++F+ M V W+ MI+ + +G EA+ LF M +
Sbjct: 283 RVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREA 342
Query: 508 GIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEK 567
+ P+ T S+L C+ G+++ ++ GF ++D+ + +++
Sbjct: 343 FVVPNEFTLSSILNGCAIGKCSGLGEQL-HGLVVKVGFDLDIYVSNALIDVYAKCEKMDT 401
Query: 568 ALEFIKGLA 576
A++ L+
Sbjct: 402 AVKLFAELS 410
Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 121/280 (43%), Gaps = 6/280 (2%)
Query: 27 QTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSN-N 85
Q H ++ GF D+ L + + A LF + + +N +I G+ N
Sbjct: 369 QLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLG 428
Query: 86 EMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFV 145
E K+ F LR ++T T+S L A ++ +GV +HG AI + + V
Sbjct: 429 EGGKAFSMFREALRNQVSVT--EVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAV 486
Query: 146 GAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGG 205
+L+D+Y K +K A+ VF++M D WN++ISG + + ++ + D++++
Sbjct: 487 SNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRIL-DIMKDRD 545
Query: 206 TWLDSTSVAAVLPAVAEVQELRLGME-IQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERA 264
+ + VL + + G E + + G + T +V + G++++A
Sbjct: 546 CKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKA 605
Query: 265 ELLFRDI-VRPDLISCNAMISGYTCNGKTESSLRLFRQLL 303
L I P ++ AM+S E + R ++L
Sbjct: 606 MKLIEGIPYEPSVMIWRAMLSASMNQNNEEFARRSAEEIL 645
>sp|O23337|PP311_ARATH Pentatricopeptide repeat-containing protein At4g14820
OS=Arabidopsis thaliana GN=PCMP-H3 PE=2 SV=1
Length = 722
Score = 441 bits (1133), Expect = e-122, Method: Compositional matrix adjust.
Identities = 230/661 (34%), Positives = 374/661 (56%), Gaps = 39/661 (5%)
Query: 162 ARKVFDKMPEK-DTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAV 220
A VF +P +++++N + L ++ + +I +F +R+ G LD S +L AV
Sbjct: 63 ALNVFSSIPSPPESIVFNPFLRDLSRSSEPRATI-LFYQRIRHVGGRLDQFSFLPILKAV 121
Query: 221 AEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCN 280
++V L GME+ + K+ +V TG + Y+ CG + A +F ++ D+++ N
Sbjct: 122 SKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWN 181
Query: 281 AMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKS 340
MI Y G + + +LF ++ S + + ++ G++ I+ F +++
Sbjct: 182 TMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIEN 241
Query: 341 GIVSNSSVLTALSTVYSRLNEMEAARK-------------------------------LF 369
+ ++ +LTAL T+Y+ M+ AR+ +F
Sbjct: 242 DVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIF 301
Query: 370 DESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAIS 429
D++ +K L W MI+ Y ++ +EA+ +F+EM S + P+ V++ S++SACA LG +
Sbjct: 302 DQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILD 361
Query: 430 LGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYG 489
KWVH + ES + ++ ALI+MYAKCG + R++F+ M ++ V+W++MI+
Sbjct: 362 KAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALS 421
Query: 490 LHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLA 549
+HG +AL LF+ M + P+ VTF+ VLY CSH+GLV EG +IF SM ++ P
Sbjct: 422 MHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKL 481
Query: 550 EHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFE 609
EHY CMVD+ GRA L +ALE I+ + V +WG+L+ AC IH + L + A++++ E
Sbjct: 482 EHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHGELELGKFAAKRILE 541
Query: 610 LDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQ 669
L+P++ G VL+SNIY+ E+ + +R+V++++ + K G + I+ G H F GD+
Sbjct: 542 LEPDHDGALVLMSNIYAREQRWEDVRNIRRVMEEKNVFKEKGLSRIDQNGKSHEFLIGDK 601
Query: 670 LHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIAT 729
H QS IYA L+++ K++ AG+ + + L DVEEEEK+ ++ HSEKLA+ FGL+
Sbjct: 602 RHKQSNEIYAKLDEVVSKLKLAGYVPDCGSVLVDVEEEEKKDLVLWHSEKLALCFGLMNE 661
Query: 730 EPGTE------IRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDY 783
E E IRI+KNLRVC DCH K +SKV R I+VRD RFH +K G+CSC DY
Sbjct: 662 EKEEEKDSCGVIRIVKNLRVCEDCHLFFKLVSKVYEREIIVRDRTRFHCYKNGLCSCRDY 721
Query: 784 W 784
W
Sbjct: 722 W 722
Score = 177 bits (450), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 128/517 (24%), Positives = 230/517 (44%), Gaps = 36/517 (6%)
Query: 10 NLFLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPK 69
N L L K+ + + Q HA I+ + L++ S YA +F SIP
Sbjct: 13 NTILEKLSFCKSLNHIKQLHAHILRTVINHKLNSFLFNLSVSSSSINLSYALNVFSSIPS 72
Query: 70 P-DLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGV 128
P + +FN +R S + P+++I FY +R + D F++ +L A S G+
Sbjct: 73 PPESIVFNPFLRDLSRSSEPRATILFYQRIR-HVGGRLDQFSFLPILKAVSKVSALFEGM 131
Query: 129 LLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNC 188
LHG A D FV +D+Y + AR VFD+M +D V WN+MI +
Sbjct: 132 ELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFG 191
Query: 189 CFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQ--------------- 233
++ +F +M ++ D + ++ A +R I
Sbjct: 192 LVDEAFKLFEEM-KDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLL 250
Query: 234 -----------CLGLKLGFH-----DHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLI 277
C+ + F +++V T +VS YSKCG ++ A+++F + DL+
Sbjct: 251 TALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLV 310
Query: 278 SCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFC 337
MIS Y + + +LR+F ++ S + + ++ +I G L +HS
Sbjct: 311 CWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCI 370
Query: 338 LKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAI 397
+G+ S S+ AL +Y++ ++A R +F++ +++ SW++MI + +G +A+
Sbjct: 371 HVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDAL 430
Query: 398 SLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVH-ELVKSRNFESNIYVSTALIDM 456
SLF M+ V PN VT +L C+ G + GK + + N + ++D+
Sbjct: 431 SLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDL 490
Query: 457 YAKCGNIVEARELFDLMSHKSEVT-WNTMISGYGLHG 492
+ + + EA E+ + M S V W +++S +HG
Sbjct: 491 FGRANLLREALEVIESMPVASNVVIWGSLMSACRIHG 527
>sp|Q9LIQ7|PP252_ARATH Pentatricopeptide repeat-containing protein At3g24000,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H87 PE=2
SV=1
Length = 633
Score = 441 bits (1133), Expect = e-122, Method: Compositional matrix adjust.
Identities = 219/544 (40%), Positives = 331/544 (60%), Gaps = 1/544 (0%)
Query: 241 FHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFR 300
F + + L++ Y+KCG +E A +F + + D ++ +ISGY+ + + +L F
Sbjct: 91 FRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFN 150
Query: 301 QLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLN 360
Q+L N T+ +I + +H FC+K G SN V +AL +Y+R
Sbjct: 151 QMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYG 210
Query: 361 EMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILS 420
M+ A+ +FD ++ SWNA+IAG+ + TE+A+ LFQ M P+ + +S+
Sbjct: 211 LMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFG 270
Query: 421 ACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVT 480
AC+ G + GKWVH + + + L+DMYAK G+I +AR++FD ++ + V+
Sbjct: 271 ACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVS 330
Query: 481 WNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMI 540
WN++++ Y HG G EA+ F EM GIRP+ ++FLSVL ACSH+GL+ EG ++ M
Sbjct: 331 WNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMK 390
Query: 541 HDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLA 600
D G P A HY +VD+LGRAG L +AL FI+ + +EP A+W ALL AC +HK+T L
Sbjct: 391 KD-GIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELG 449
Query: 601 RVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGT 660
A+E +FELDP++ G HV+L NIY++ + AA VR+ +K+ + K P C+ +E+
Sbjct: 450 AYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVEIENA 509
Query: 661 PHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKL 720
H+F + D+ HPQ I E++ K++E G+ +T + V+++E+E+ ++ HSEK+
Sbjct: 510 IHMFVANDERHPQREEIARKWEEVLAKIKELGYVPDTSHVIVHVDQQEREVNLQYHSEKI 569
Query: 721 AIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSC 780
A+AF L+ T PG+ I I KN+RVC DCHTA K SKV GR I+VRD NRFHHFK G CSC
Sbjct: 570 ALAFALLNTPPGSTIHIKKNIRVCGDCHTAIKLASKVVGREIIVRDTNRFHHFKDGNCSC 629
Query: 781 GDYW 784
DYW
Sbjct: 630 KDYW 633
Score = 172 bits (436), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 97/366 (26%), Positives = 194/366 (53%), Gaps = 2/366 (0%)
Query: 127 GVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMK 186
G ++H H + S + D+ +G L+++Y K ++ ARKVF+KMP++D V W ++ISG +
Sbjct: 79 GRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQ 138
Query: 187 NCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVY 246
+ D++ F M+R G + + ++++V+ A A + G ++ +K GF +V+
Sbjct: 139 HDRPCDALLFFNQMLRFGYS-PNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVH 197
Query: 247 VLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASA 306
V + L+ Y++ G ++ A+L+F + + +S NA+I+G+ TE +L LF+ +L
Sbjct: 198 VGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDG 257
Query: 307 ERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAAR 366
R + + L G L +H++ +KSG + L +Y++ + AR
Sbjct: 258 FRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDAR 317
Query: 367 KLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLG 426
K+FD +++ + SWN+++ Y Q+G +EA+ F+EM+ + PN ++ S+L+AC+ G
Sbjct: 318 KIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSG 377
Query: 427 AISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMS-HKSEVTWNTMI 485
+ G +EL+K + ++D+ + G++ A + M + W ++
Sbjct: 378 LLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALL 437
Query: 486 SGYGLH 491
+ +H
Sbjct: 438 NACRMH 443
Score = 131 bits (330), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 75/262 (28%), Positives = 139/262 (53%), Gaps = 2/262 (0%)
Query: 333 IHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGL 392
+H+ L+S + + L +Y++ +E ARK+F++ ++ +W +I+GY+Q+
Sbjct: 82 VHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDR 141
Query: 393 TEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTA 452
+A+ F +M +PN T+SS++ A A G +H F+SN++V +A
Sbjct: 142 PCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSA 201
Query: 453 LIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPS 512
L+D+Y + G + +A+ +FD + +++V+WN +I+G+ +AL+LF ML G RPS
Sbjct: 202 LLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPS 261
Query: 513 GVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFI 572
++ S+ ACS G + +G + MI G K +A ++D+ ++G + A +
Sbjct: 262 HFSYASLFGACSSTGFLEQGKWVHAYMIKS-GEKLVAFAGNTLLDMYAKSGSIHDARKIF 320
Query: 573 KGLAVEPGPAVWGALLGACMIH 594
LA + W +LL A H
Sbjct: 321 DRLA-KRDVVSWNSLLTAYAQH 341
Score = 127 bits (320), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 95/397 (23%), Positives = 184/397 (46%), Gaps = 14/397 (3%)
Query: 6 PQSRNLFLSLLKGAKTQSQLTQ---THAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARA 62
P R + +LLK L Q HA I+ F++D+ L + + + AR
Sbjct: 57 PADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARK 116
Query: 63 LFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASA-- 120
+F +P+ D + +I G+S ++ P ++ F+ + + +P+ FT S V+ AA+A
Sbjct: 117 VFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLR-FGYSPNEFTLSSVIKAAAAER 175
Query: 121 --CCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWN 178
CC G LHG + G+ S++ VG+AL+DLY ++ + A+ VFD + ++ V WN
Sbjct: 176 RGCC----GHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWN 231
Query: 179 SMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLK 238
++I+G + + ++ +F M+R+G S A++ A + L G + +K
Sbjct: 232 ALIAGHARRSGTEKALELFQGMLRDGFR-PSHFSYASLFGACSSTGFLEQGKWVHAYMIK 290
Query: 239 LGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRL 298
G + L+ Y+K G + A +F + + D++S N++++ Y +G + ++
Sbjct: 291 SGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWW 350
Query: 299 FRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSR 358
F ++ R N + + ++ G L + K GIV + + + R
Sbjct: 351 FEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGR 410
Query: 359 LNEMEAARKLFDESS-EKSLASWNAMIAGYTQNGLTE 394
++ A + +E E + A W A++ + TE
Sbjct: 411 AGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTE 447
Score = 83.2 bits (204), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 99/227 (43%), Gaps = 39/227 (17%)
Query: 401 QEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKC 460
+++ S + + +++L C + G+ VH + F +I + L++MYAKC
Sbjct: 49 NDLEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKC 108
Query: 461 GNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVL 520
G++ EAR++F+ M + VTW T+ISGY H +AL F++ML G P+ T SV+
Sbjct: 109 GSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVI 168
Query: 521 YACS-----------HAGLVREGDEIFQSMIH-DHGFKPLAEHYACMVD----------- 557
A + H V+ G F S +H L Y M D
Sbjct: 169 KAAAAERRGCCGHQLHGFCVKCG---FDSNVHVGSALLDLYTRYGLMDDAQLVFDALESR 225
Query: 558 --------ILGRAGQ--LEKALEFIKGL---AVEPGPAVWGALLGAC 591
I G A + EKALE +G+ P + +L GAC
Sbjct: 226 NDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGAC 272
>sp|Q9STF3|PP265_ARATH Pentatricopeptide repeat-containing protein At3g46790,
chloroplastic OS=Arabidopsis thaliana GN=CRR2 PE=2 SV=1
Length = 657
Score = 439 bits (1129), Expect = e-122, Method: Compositional matrix adjust.
Identities = 226/545 (41%), Positives = 331/545 (60%), Gaps = 6/545 (1%)
Query: 246 YVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQL--- 302
++ T L+ YS G V+ A +F + + NA+ T G E L L+ ++
Sbjct: 113 FLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRI 172
Query: 303 -LASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNE 361
+ S + + + HL IH+ + G S+ ++T L +Y+R
Sbjct: 173 GVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGC 232
Query: 362 MEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEM--QASKVAPNPVTVSSIL 419
++ A +F +++ SW+AMIA Y +NG EA+ F+EM + +PN VT+ S+L
Sbjct: 233 VDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVL 292
Query: 420 SACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEV 479
ACA L A+ GK +H + R +S + V +AL+ MY +CG + + +FD M + V
Sbjct: 293 QACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVV 352
Query: 480 TWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSM 539
+WN++IS YG+HG+G +A+Q+F EML +G P+ VTF+SVL ACSH GLV EG +F++M
Sbjct: 353 SWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETM 412
Query: 540 IHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNL 599
DHG KP EHYACMVD+LGRA +L++A + ++ + EPGP VWG+LLG+C IH + L
Sbjct: 413 WRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVEL 472
Query: 600 ARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGG 659
A AS +LF L+P+N G +VLL++IY+ + + + V+++++ R L K PG +EV
Sbjct: 473 AERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQKLPGRCWMEVRR 532
Query: 660 TPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEK 719
+ F S D+ +P I+A L KL M+E G+ +T L+++E EEKE ++ HSEK
Sbjct: 533 KMYSFVSVDEFNPLMEQIHAFLVKLAEDMKEKGYIPQTKGVLYELETEEKERIVLGHSEK 592
Query: 720 LAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCS 779
LA+AFGLI T G IRI KNLR+C DCH TKFISK + I+VRD NRFH FK GVCS
Sbjct: 593 LALAFGLINTSKGEPIRITKNLRLCEDCHLFTKFISKFMEKEILVRDVNRFHRFKNGVCS 652
Query: 780 CGDYW 784
CGDYW
Sbjct: 653 CGDYW 657
Score = 176 bits (447), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 112/424 (26%), Positives = 211/424 (49%), Gaps = 13/424 (3%)
Query: 82 FSNNEMPKSSICFYTHLRKNTAL-----TPDNFTYSFVLSAASACCDRSIGVLLHGHAIV 136
SNN++ +S +C L++ + +P TY ++ S + +H H +
Sbjct: 47 ISNNQLIQS-LCKEGKLKQAIRVLSQESSPSQQTYELLILCCGHRSSLSDALRVHRHILD 105
Query: 137 SGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWV 196
+G D F+ L+ +Y V ARKVFDK ++ +WN++ L ++ + +
Sbjct: 106 NGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGL 165
Query: 197 FGDMVRNG---GTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVS 253
+ M R G + + + A + + V L G EI + G+ HVY++T LV
Sbjct: 166 YWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVD 225
Query: 254 FYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAE--RVNS 311
Y++ G V+ A +F + +++S +AMI+ Y NGK +LR FR+++ + NS
Sbjct: 226 MYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNS 285
Query: 312 STIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDE 371
T+V ++ L IH + L+ G+ S V++AL T+Y R ++E +++FD
Sbjct: 286 VTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDR 345
Query: 372 SSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLG 431
++ + SWN++I+ Y +G ++AI +F+EM A+ +P PVT S+L AC+ G + G
Sbjct: 346 MHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEG 405
Query: 432 KWVHE-LVKSRNFESNIYVSTALIDMYAKCGNIVEARELF-DLMSHKSEVTWNTMISGYG 489
K + E + + + I ++D+ + + EA ++ D+ + W +++
Sbjct: 406 KRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCR 465
Query: 490 LHGH 493
+HG+
Sbjct: 466 IHGN 469
Score = 135 bits (340), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 114/467 (24%), Positives = 202/467 (43%), Gaps = 56/467 (11%)
Query: 23 SQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGF 82
S + H I+ +G D TKL SD + YAR +F K ++++N + R
Sbjct: 94 SDALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRAL 153
Query: 83 SNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSA--ASACCDRSI--GVLLHGHAIVSG 138
+ + + Y + + + D FTY++VL A AS C + G +H H G
Sbjct: 154 TLAGHGEEVLGLYWKMNR-IGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRG 212
Query: 139 YGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFG 198
Y S +++ LVD+Y +F V A VF MP ++ V W++MI+ KN +++ F
Sbjct: 213 YSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFR 272
Query: 199 DMVR-NGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSK 257
+M+R + +S ++ +VL A A + L G I L+ G + V++ LV+ Y +
Sbjct: 273 EMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGR 332
Query: 258 CGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGL 317
CG++E + +F + D++S N++IS Y +G + ++++F ++LA+ T V +
Sbjct: 333 CGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSV 392
Query: 318 IPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLF-----DES 372
+ C G+V E ++LF D
Sbjct: 393 LGA----------------CSHEGLV-------------------EEGKRLFETMWRDHG 417
Query: 373 SEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGK 432
+ + + M+ + +EA + Q+M + P P S+L +C G + L
Sbjct: 418 IKPQIEHYACMVDLLGRANRLDEAAKMVQDM---RTEPGPKVWGSLLGSCRIHGNVELA- 473
Query: 433 WVHELVKSRNF---ESNIYVSTALIDMYAKCGNIVEARELFDLMSHK 476
E R F N L D+YA+ E + + L+ H+
Sbjct: 474 ---ERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHR 517
Score = 67.4 bits (163), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 96/215 (44%), Gaps = 11/215 (5%)
Query: 381 NAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKS 440
N +I + G ++AI + + + +P+ T ++ C ++S VH +
Sbjct: 50 NQLIQSLCKEGKLKQAIRVLSQ----ESSPSQQTYELLILCCGHRSSLSDALRVHRHILD 105
Query: 441 RNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQL 500
+ + +++T LI MY+ G++ AR++FD ++ WN + L GHG E L L
Sbjct: 106 NGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGL 165
Query: 501 FSEMLHSGIRPSGVTFLSVLYACSHA----GLVREGDEIFQSMIHDHGFKPLAEHYACMV 556
+ +M G+ T+ VL AC + + +G EI + + G+ +V
Sbjct: 166 YWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEI-HAHLTRRGYSSHVYIMTTLV 224
Query: 557 DILGRAGQLEKALEFIKGLAVEPGPAVWGALLGAC 591
D+ R G ++ A G+ V W A++ AC
Sbjct: 225 DMYARFGCVDYASYVFGGMPVR-NVVSWSAMI-AC 257
>sp|Q9ZVF4|PP140_ARATH Pentatricopeptide repeat-containing protein At2g01510,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H37 PE=3
SV=1
Length = 584
Score = 436 bits (1120), Expect = e-121, Method: Compositional matrix adjust.
Identities = 227/556 (40%), Positives = 325/556 (58%), Gaps = 2/556 (0%)
Query: 231 EIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNG 290
+I + L+ GF + +LT L+ G++ A +F ++ +P + N + GY N
Sbjct: 29 KIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYVRNQ 88
Query: 291 KTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLT 350
SL L++++ R + T ++ G +H+ +K G V T
Sbjct: 89 LPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLGIVAT 148
Query: 351 ALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAP 410
L +Y + E+ +A LF+ K L +WNA +A Q G + A+ F +M A V
Sbjct: 149 ELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQF 208
Query: 411 NPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELF 470
+ TV S+LSAC QLG++ +G+ +++ + + NI V A +DM+ KCGN AR LF
Sbjct: 209 DSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVLF 268
Query: 471 DLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVR 530
+ M ++ V+W+TMI GY ++G EAL LF+ M + G+RP+ VTFL VL ACSHAGLV
Sbjct: 269 EEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLVN 328
Query: 531 EGDEIFQSMI--HDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALL 588
EG F M+ +D +P EHYACMVD+LGR+G LE+A EFIK + VEP +WGALL
Sbjct: 329 EGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTGIWGALL 388
Query: 589 GACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAK 648
GAC +H+D L + ++ L E P+ YHVLLSNIY+A + VR ++K K
Sbjct: 389 GACAVHRDMILGQKVADVLVETAPDIGSYHVLLSNIYAAAGKWDCVDKVRSKMRKLGTKK 448
Query: 649 APGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEE 708
+ +E G H F GD+ HPQS AIY L+++ K+R+ G+ +T + HDVE EE
Sbjct: 449 VAAYSSVEFEGKIHFFNRGDKSHPQSKAIYEKLDEILKKIRKMGYVPDTCSVFHDVEMEE 508
Query: 709 KELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDAN 768
KE + HSEKLAIAFGLI PG IR++KNLR C DCH +KF+S +T I++RD N
Sbjct: 509 KECSLSHHSEKLAIAFGLIKGRPGHPIRVMKNLRTCDDCHAFSKFVSSLTSTEIIMRDKN 568
Query: 769 RFHHFKGGVCSCGDYW 784
RFHHF+ GVCSC ++W
Sbjct: 569 RFHHFRNGVCSCKEFW 584
Score = 171 bits (433), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 122/443 (27%), Positives = 210/443 (47%), Gaps = 42/443 (9%)
Query: 1 MSMKTPQSRNLFLSLLKGAKTQ-SQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCY 59
++ +TP ++ + LL+ + ++ QL + HA ++ GF S +T+L L CY
Sbjct: 2 LAKQTPLTKQMLSELLRASSSKPKQLKKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCY 61
Query: 60 ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
AR +F + KP +FL+N + +G+ N++P S+ Y +R + + PD FTY FV+ A S
Sbjct: 62 ARQVFDEMHKPRIFLWNTLFKGYVRNQLPFESLLLYKKMR-DLGVRPDEFTYPFVVKAIS 120
Query: 120 ACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNS 179
D S G LH H + G+G V LV +Y KF + SA +F+ M KD V WN+
Sbjct: 121 QLGDFSCGFALHAHVVKYGFGCLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNA 180
Query: 180 MISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKL 239
++ ++ ++ F M + DS +V ++L A ++ L +G EI K
Sbjct: 181 FLAVCVQTGNSAIALEYFNKMCAD-AVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKE 239
Query: 240 GFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLF 299
++ V + + KCG E A +LF ++ + +++S + MI GY NG + +L LF
Sbjct: 240 EIDCNIIVENARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLF 299
Query: 300 RQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRL 359
+ R N T +G++ S C +G+V
Sbjct: 300 TTMQNEGLRPNYVTFLGVL----------------SACSHAGLV---------------- 327
Query: 360 NEMEAARKLFDESSEKSLAS----WNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTV 415
NE + L +S++K+L + M+ ++GL EEA ++M V P+
Sbjct: 328 NEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKM---PVEPDTGIW 384
Query: 416 SSILSACAQLGAISLGKWVHELV 438
++L ACA + LG+ V +++
Sbjct: 385 GALLGACAVHRDMILGQKVADVL 407
Score = 149 bits (376), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 97/334 (29%), Positives = 164/334 (49%), Gaps = 5/334 (1%)
Query: 162 ARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVA 221
AR+VFD+M + LWN++ G ++N +S+ ++ M R+ G D + V+ A++
Sbjct: 62 ARQVFDEMHKPRIFLWNTLFKGYVRNQLPFESLLLYKKM-RDLGVRPDEFTYPFVVKAIS 120
Query: 222 EVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNA 281
++ + G + +K GF V T LV Y K GE+ AE LF + DL++ NA
Sbjct: 121 QLGDFSCGFALHAHVVKYGFGCLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNA 180
Query: 282 MISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSG 341
++ G + +L F ++ A A + +S T+V ++ G L + I+ K
Sbjct: 181 FLAVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEE 240
Query: 342 IVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQ 401
I N V A ++ + EAAR LF+E ++++ SW+ MI GY NG + EA++LF
Sbjct: 241 IDCNIIVENARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFT 300
Query: 402 EMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELV---KSRNFESNIYVSTALIDMYA 458
MQ + PN VT +LSAC+ G ++ GK L+ +N E ++D+
Sbjct: 301 TMQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLG 360
Query: 459 KCGNIVEARELFDLMSHKSEV-TWNTMISGYGLH 491
+ G + EA E M + + W ++ +H
Sbjct: 361 RSGLLEEAYEFIKKMPVEPDTGIWGALLGACAVH 394
Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 76/169 (44%), Gaps = 2/169 (1%)
Query: 432 KWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLH 491
K +H +V F + T L++ G++ AR++FD M WNT+ GY +
Sbjct: 28 KKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYVRN 87
Query: 492 GHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEH 551
E+L L+ +M G+RP T+ V+ A S G G + ++ +GF L
Sbjct: 88 QLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVV-KYGFGCLGIV 146
Query: 552 YACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLA 600
+V + + G+L A + + V+ A W A L C+ ++ +A
Sbjct: 147 ATELVMMYMKFGELSSAEFLFESMQVKDLVA-WNAFLAVCVQTGNSAIA 194
>sp|P93011|PP182_ARATH Pentatricopeptide repeat-containing protein At2g33760
OS=Arabidopsis thaliana GN=PCMP-H6 PE=3 SV=1
Length = 583
Score = 433 bits (1114), Expect = e-120, Method: Compositional matrix adjust.
Identities = 228/587 (38%), Positives = 352/587 (59%), Gaps = 22/587 (3%)
Query: 209 DSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLF 268
+S + A++ A V++L+ ++ + G+ +LT L++ + LLF
Sbjct: 8 NSAAYEAIVRAGPRVKQLQ---QVHAHLIVTGYGRSRSLLTKLITLACSARAIAYTHLLF 64
Query: 269 RDIVRPDLISCNAMISGYTCNGKTESSLRL-------FRQLLASAERVNSSTIVGLIPVF 321
+ PD N++I K+ S LRL +R++L+S ++ T +I
Sbjct: 65 LSVPLPDDFLFNSVI-------KSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSC 117
Query: 322 YPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWN 381
L + +H + SG ++ V AL T YS+ +ME AR++FD EKS+ +WN
Sbjct: 118 ADLSALRIGKGVHCHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWN 177
Query: 382 AMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSR 441
++++G+ QNGL +EAI +F +M+ S P+ T S+LSACAQ GA+SLG WVH+ + S
Sbjct: 178 SLVSGFEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISE 237
Query: 442 NFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLF 501
+ N+ + TALI++Y++CG++ +ARE+FD M + W MIS YG HG+G +A++LF
Sbjct: 238 GLDLNVKLGTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELF 297
Query: 502 SEMLHS-GIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILG 560
++M G P+ VTF++VL AC+HAGLV EG +++ M + P EH+ CMVD+LG
Sbjct: 298 NKMEDDCGPIPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLG 357
Query: 561 RAGQLEKALEFIKGLAVE---PGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGY 617
RAG L++A +FI L PA+W A+LGAC +H++ +L +++L L+P+N G+
Sbjct: 358 RAGFLDEAYKFIHQLDATGKATAPALWTAMLGACKMHRNYDLGVEIAKRLIALEPDNPGH 417
Query: 618 HVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAI 677
HV+LSNIY+ + + +R + + L K G ++IEV ++F+ GD+ H ++ I
Sbjct: 418 HVMLSNIYALSGKTDEVSHIRDGMMRNNLRKQVGYSVIEVENKTYMFSMGDESHQETGEI 477
Query: 678 YAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRI 737
Y LE L + +E G+ + +H VEEEEKE ++ HSEKLA+AFGL+ T I I
Sbjct: 478 YRYLETLISRCKEIGYAPVSEEVMHQVEEEEKEFALRYHSEKLAVAFGLLKT-VDVAITI 536
Query: 738 IKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
+KNLR+C DCH+A K+IS V+ R I VRD RFHHF+ G CSC DYW
Sbjct: 537 VKNLRICEDCHSAFKYISIVSNRQITVRDKLRFHHFQNGSCSCLDYW 583
Score = 181 bits (459), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 122/432 (28%), Positives = 208/432 (48%), Gaps = 33/432 (7%)
Query: 1 MSMKTPQSRNLFLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYA 60
M+ K + + ++++ QL Q HA +I+ G+ S +TKL +A Y
Sbjct: 1 MTTKVAANSAAYEAIVRAGPRVKQLQQVHAHLIVTGYGRSRSLLTKLITLACSARAIAYT 60
Query: 61 RALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASA 120
LF S+P PD FLFN +I+ S +P + +Y + + ++P N+T++ V+ + +
Sbjct: 61 HLLFLSVPLPDDFLFNSVIKSTSKLRLPLHCVAYYRRMLSSN-VSPSNYTFTSVIKSCAD 119
Query: 121 CCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSM 180
IG +H HA+VSG+G D +V AALV Y K ++ AR+VFD+MPEK V WNS+
Sbjct: 120 LSALRIGKGVHCHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSL 179
Query: 181 ISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLG 240
+SG +N ++I VF M R G DS + ++L A A+ + LG + + G
Sbjct: 180 VSGFEQNGLADEAIQVFYQM-RESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEG 238
Query: 241 FHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFR 300
+V + T L++ YS+CG+V +A +F + ++ + AMIS Y +G + ++ LF
Sbjct: 239 LDLNVKLGTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFN 298
Query: 301 QLLASAERV-NSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRL 359
++ + N+ T V + L+ C H+ ++ G +VY R
Sbjct: 299 KMEDDCGPIPNNVTFVAV-----------LSACAHAGLVEEG-----------RSVYKR- 335
Query: 360 NEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSIL 419
M + +L + M+ + G +EA ++ A+ A P +++L
Sbjct: 336 --MTKSYRLI-----PGVEHHVCMVDMLGRAGFLDEAYKFIHQLDATGKATAPALWTAML 388
Query: 420 SACAQLGAISLG 431
AC LG
Sbjct: 389 GACKMHRNYDLG 400
>sp|Q9M4P3|PP316_ARATH Pentatricopeptide repeat-containing protein At4g16835,
mitochondrial OS=Arabidopsis thaliana GN=DYW10 PE=2 SV=3
Length = 656
Score = 433 bits (1113), Expect = e-120, Method: Compositional matrix adjust.
Identities = 237/627 (37%), Positives = 356/627 (56%), Gaps = 48/627 (7%)
Query: 159 VKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLP 218
+ A +VF M K+T+ WNS++ G+ K D + +
Sbjct: 77 IDGALRVFHGMRAKNTITWNSLLIGISK----------------------DPSRMMEAHQ 114
Query: 219 AVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLIS 278
E+ E + ++S Y + E+A+ F + D S
Sbjct: 115 LFDEIPE-----------------PDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAAS 157
Query: 279 CNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCL 338
N MI+GY G+ E + LF ++ E ++ I G I G L +
Sbjct: 158 WNTMITGYARRGEMEKARELFYSMMEKNEVSWNAMISGYIEC----GDLEKASHFFKVAP 213
Query: 339 KSGIVSNSSVLTALSTVYSRLNEMEAARKLF-DESSEKSLASWNAMIAGYTQNGLTEEAI 397
G+V+ TA+ T Y + ++E A +F D + K+L +WNAMI+GY +N E+ +
Sbjct: 214 VRGVVA----WTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGL 269
Query: 398 SLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMY 457
LF+ M + PN +SS L C++L A+ LG+ +H++V +++ T+LI MY
Sbjct: 270 KLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMY 329
Query: 458 AKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFL 517
KCG + +A +LF++M K V WN MISGY HG+ +AL LF EM+ + IRP +TF+
Sbjct: 330 CKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFV 389
Query: 518 SVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAV 577
+VL AC+HAGLV G F+SM+ D+ +P +HY CMVD+LGRAG+LE+AL+ I+ +
Sbjct: 390 AVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMPF 449
Query: 578 EPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATV 637
P AV+G LLGAC +HK+ LA A+EKL +L+ +N +V L+NIY+++ + A V
Sbjct: 450 RPHAAVFGTLLGACRVHKNVELAEFAAEKLLQLNSQNAAGYVQLANIYASKNRWEDVARV 509
Query: 638 RQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTET 697
R+ +K+ + K PG + IE+ H F S D++HP+ +I+ L++L KM+ AG++ E
Sbjct: 510 RKRMKESNVVKVPGYSWIEIRNKVHHFRSSDRIHPELDSIHKKLKELEKKMKLAGYKPEL 569
Query: 698 VTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKV 757
ALH+VEEE+KE ++ HSEKLA+AFG I G++I++ KNLR+C DCH A KFIS++
Sbjct: 570 EFALHNVEEEQKEKLLLWHSEKLAVAFGCIKLPQGSQIQVFKNLRICGDCHKAIKFISEI 629
Query: 758 TGRVIVVRDANRFHHFKGGVCSCGDYW 784
R I+VRD RFHHFK G CSCGDYW
Sbjct: 630 EKREIIVRDTTRFHHFKDGSCSCGDYW 656
Score = 154 bits (389), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 100/338 (29%), Positives = 172/338 (50%), Gaps = 13/338 (3%)
Query: 142 DLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMV 201
D F ++ Y + + A+ FD+MP KD WN+MI+G + + + +F M+
Sbjct: 123 DTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYSMM 182
Query: 202 -RNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGE 260
+N +W A++ E +L K+ V T +++ Y K +
Sbjct: 183 EKNEVSW------NAMISGYIECGDLEKASHF----FKVAPVRGVVAWTAMITGYMKAKK 232
Query: 261 VERAELLFRDI-VRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIP 319
VE AE +F+D+ V +L++ NAMISGY N + E L+LFR +L R NSS + +
Sbjct: 233 VELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALL 292
Query: 320 VFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLAS 379
L L IH KS + ++ + LT+L ++Y + E+ A KLF+ +K + +
Sbjct: 293 GCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVA 352
Query: 380 WNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLG-KWVHELV 438
WNAMI+GY Q+G ++A+ LF+EM +K+ P+ +T ++L AC G +++G + +V
Sbjct: 353 WNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMV 412
Query: 439 KSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHK 476
+ E T ++D+ + G + EA +L M +
Sbjct: 413 RDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMPFR 450
Score = 107 bits (266), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 102/401 (25%), Positives = 176/401 (43%), Gaps = 54/401 (13%)
Query: 60 ARALFFSIPKPDLFLFNVIIRGFSNN-EMPKSSICFYTHLRKNTALTPDNFTYSFVLSAA 118
A++ F +P D +N +I G++ EM K+ FY+ + KN +++ ++S
Sbjct: 143 AQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYSMMEKNEV------SWNAMISGY 196
Query: 119 SACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMP-EKDTVLW 177
C D A V G + A++ Y K V+ A +F M K+ V W
Sbjct: 197 IECGDLEKASHFFKVAPVRG----VVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTW 252
Query: 178 NSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGL 237
N+MISG ++N +D + +F M+ G +S+ +++ L +E+ L+LG +I +
Sbjct: 253 NAMISGYVENSRPEDGLKLFRAMLEEG-IRPNSSGLSSALLGCSELSALQLGRQIHQIVS 311
Query: 238 KLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLR 297
K + V LT L+S Y KCGE+ A LF + + D+++ NAMISGY +G + +L
Sbjct: 312 KSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALC 371
Query: 298 LFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYS 357
LFR+++ + R + T V + L C H+ + G+ S++
Sbjct: 372 LFREMIDNKIRPDWITFVAV-----------LLACNHAGLVNIGMAYFESMVR------- 413
Query: 358 RLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSS 417
D E + M+ + G EEA+ L + M P+ +
Sbjct: 414 ------------DYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSM---PFRPHAAVFGT 458
Query: 418 ILSACAQLGAISLGKWVHELVKSRNFE--------SNIYVS 450
+L AC + L ++ E + N + +NIY S
Sbjct: 459 LLGACRVHKNVELAEFAAEKLLQLNSQNAAGYVQLANIYAS 499
Score = 54.7 bits (130), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 93/225 (41%), Gaps = 24/225 (10%)
Query: 368 LFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGA 427
L S + + N +IA ++G + A+ +F M+A N +T +S+L ++ +
Sbjct: 52 LTKPSDQDQIFPLNKIIARCVRSGDIDGALRVFHGMRAK----NTITWNSLLIGISKDPS 107
Query: 428 --ISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMI 485
+ + E+ + F NI +S Y + N +A+ FD M K +WNTMI
Sbjct: 108 RMMEAHQLFDEIPEPDTFSYNIMLSC-----YVRNVNFEKAQSFFDRMPFKDAASWNTMI 162
Query: 486 SGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGF 545
+GY G +A +LF M+ V + +G + GD + H
Sbjct: 163 TGYARRGEMEKARELFYSMMEKN---------EVSWNAMISGYIECGD--LEKASHFFKV 211
Query: 546 KPLAEHYACMVDILG--RAGQLEKALEFIKGLAVEPGPAVWGALL 588
P+ A I G +A ++E A K + V W A++
Sbjct: 212 APVRGVVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMI 256
>sp|P0C898|PP232_ARATH Putative pentatricopeptide repeat-containing protein At3g15130
OS=Arabidopsis thaliana GN=PCMP-H86 PE=3 SV=1
Length = 689
Score = 433 bits (1113), Expect = e-120, Method: Compositional matrix adjust.
Identities = 238/666 (35%), Positives = 368/666 (55%), Gaps = 9/666 (1%)
Query: 127 GVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMK 186
G +H + + SG G +L L+D+Y K A KVFD MPE++ V W++++SG +
Sbjct: 25 GGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVL 84
Query: 187 NCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVY 246
N + S+ +F +M R G + + + + L A + L G++I LK+GF V
Sbjct: 85 NGDLKGSLSLFSEMGRQG-IYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVE 143
Query: 247 VLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLAS- 305
V LV YSKCG + AE +FR IV LIS NAMI+G+ G +L F + +
Sbjct: 144 VGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEAN 203
Query: 306 -AERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGI--VSNSSVLTALSTVYSRLNEM 362
ER + T+ L+ G ++ IH F ++SG S++++ +L +Y + +
Sbjct: 204 IKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYL 263
Query: 363 EAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSAC 422
+ARK FD+ EK++ SW+++I GY Q G EA+ LF+ +Q + +SSI+
Sbjct: 264 FSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVF 323
Query: 423 AQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWN 482
A + GK + L V +++DMY KCG + EA + F M K ++W
Sbjct: 324 ADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWT 383
Query: 483 TMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHD 542
+I+GYG HG G +++++F EML I P V +L+VL ACSH+G+++EG+E+F ++
Sbjct: 384 VVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLET 443
Query: 543 HGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARV 602
HG KP EHYAC+VD+LGRAG+L++A I + ++P +W LL C +H D L +
Sbjct: 444 HGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKE 503
Query: 603 ASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPH 662
+ L +D +N +V++SN+Y + + R++ + L K G + +E+ H
Sbjct: 504 VGKILLRIDAKNPANYVMMSNLYGQAGYWNEQGNARELGNIKGLKKEAGMSWVEIEREVH 563
Query: 663 VFTSGDQLHPQSTAIYAMLEKLNGKMREA-GFQTETVTALHDVEEEEKELMMKVHSEKLA 721
F SG+ HP + I L++ ++RE G+ LHD+++E KE ++ HSEKLA
Sbjct: 564 FFRSGEDSHPLTPVIQETLKEAERRLREELGYVYGLKHELHDIDDESKEENLRAHSEKLA 623
Query: 722 IAFGLIA---TEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVC 778
I L + G IR+ KNLRVC+DCH K +SK+T VVRDA RFH F+ G C
Sbjct: 624 IGLALATGGLNQKGKTIRVFKNLRVCVDCHEFIKGLSKITKIAYVVRDAVRFHSFEDGCC 683
Query: 779 SCGDYW 784
SCGDYW
Sbjct: 684 SCGDYW 689
Score = 170 bits (430), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 125/495 (25%), Positives = 234/495 (47%), Gaps = 9/495 (1%)
Query: 6 PQSRNLFLSLLKGAKTQ---SQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARA 62
P R +S+L+ + Q Q H ++ G +L T L + A
Sbjct: 3 PNQRQNLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYK 62
Query: 63 LFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACC 122
+F S+P+ ++ ++ ++ G N K S+ ++ + + + P+ FT+S L A
Sbjct: 63 VFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQ-GIYPNEFTFSTNLKACGLLN 121
Query: 123 DRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMIS 182
G+ +HG + G+ + VG +LVD+Y K + A KVF ++ ++ + WN+MI+
Sbjct: 122 ALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIA 181
Query: 183 GLMKNCCFQDSIWVFGDMVR-NGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGF 241
G + ++ FG M N D ++ ++L A + + G +I ++ GF
Sbjct: 182 GFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGF 241
Query: 242 H--DHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLF 299
H + LV Y KCG + A F I +IS +++I GY G+ ++ LF
Sbjct: 242 HCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLF 301
Query: 300 RQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRL 359
++L +++S + +I VF F L + + +K +SVL ++ +Y +
Sbjct: 302 KRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKC 361
Query: 360 NEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSIL 419
++ A K F E K + SW +I GY ++GL ++++ +F EM + P+ V ++L
Sbjct: 362 GLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVL 421
Query: 420 SACAQLGAISLGKWV-HELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSE 478
SAC+ G I G+ + +L+++ + + ++D+ + G + EA+ L D M K
Sbjct: 422 SACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPN 481
Query: 479 V-TWNTMISGYGLHG 492
V W T++S +HG
Sbjct: 482 VGIWQTLLSLCRVHG 496
Score = 78.2 bits (191), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 87/174 (50%), Gaps = 2/174 (1%)
Query: 417 SILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHK 476
SIL C + G G VH + N+ S LIDMY KC + A ++FD M +
Sbjct: 11 SILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPER 70
Query: 477 SEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIF 536
+ V+W+ ++SG+ L+G +L LFSEM GI P+ TF + L AC + +G +I
Sbjct: 71 NVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQI- 129
Query: 537 QSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGA 590
GF+ + E +VD+ + G++ +A + + + V+ W A++
Sbjct: 130 HGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRI-VDRSLISWNAMIAG 182
>sp|Q8LK93|PP145_ARATH Pentatricopeptide repeat-containing protein At2g02980
OS=Arabidopsis thaliana GN=PCMP-H26 PE=2 SV=2
Length = 603
Score = 432 bits (1112), Expect = e-120, Method: Compositional matrix adjust.
Identities = 218/581 (37%), Positives = 337/581 (58%), Gaps = 5/581 (0%)
Query: 208 LDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKC---GEVERA 264
+D+ + + +++ LR M+IQ +K D V + L++F ++ + A
Sbjct: 24 IDTVNTQNPILLISKCNSLRELMQIQAYAIKSHIED-VSFVAKLINFCTESPTESSMSYA 82
Query: 265 ELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPF 324
LF + PD++ N+M GY+ LF ++L ++ T L+
Sbjct: 83 RHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVA 142
Query: 325 GHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMI 384
L +H +K G+ N V L +Y+ ++++AR +FD E + +NAMI
Sbjct: 143 KALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMI 202
Query: 385 AGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFE 444
GY + EA+SLF+EMQ + PN +T+ S+LS+CA LG++ LGKW+H+ K +F
Sbjct: 203 TGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFC 262
Query: 445 SNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEM 504
+ V+TALIDM+AKCG++ +A +F+ M +K W+ MI Y HG +++ +F M
Sbjct: 263 KYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERM 322
Query: 505 LHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQ 564
++P +TFL +L ACSH G V EG + F M+ G P +HY MVD+L RAG
Sbjct: 323 RSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGN 382
Query: 565 LEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNI 624
LE A EFI L + P P +W LL AC H + +LA SE++FELD + G +V+LSN+
Sbjct: 383 LEDAYEFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYVILSNL 442
Query: 625 YSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKL 684
Y+ + + ++R+V+K RK K PGC+ IEV H F SGD + +T ++ L+++
Sbjct: 443 YARNKKWEYVDSLRKVMKDRKAVKVPGCSSIEVNNVVHEFFSGDGVKSATTKLHRALDEM 502
Query: 685 NGKMREAGFQTETVTALH-DVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRV 743
+++ +G+ +T +H ++ ++EKE+ ++ HSEKLAI FGL+ T PGT IR++KNLRV
Sbjct: 503 VKELKLSGYVPDTSMVVHANMNDQEKEITLRYHSEKLAITFGLLNTPPGTTIRVVKNLRV 562
Query: 744 CLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
C DCH A K IS + GR +V+RD RFHHF+ G CSCGD+W
Sbjct: 563 CRDCHNAAKLISLIFGRKVVLRDVQRFHHFEDGKCSCGDFW 603
Score = 123 bits (308), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 109/446 (24%), Positives = 201/446 (45%), Gaps = 54/446 (12%)
Query: 3 MKTPQSRNLFLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDF---KATCY 59
+ T ++N L L+ + +L Q A I + D+S V KL + ++ + Y
Sbjct: 24 IDTVNTQNPIL-LISKCNSLRELMQIQAYAIKSHIE-DVSFVAKLINFCTESPTESSMSY 81
Query: 60 ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
AR LF ++ +PD+ +FN + RG+S P + + ++ L PDN+T+ +L A +
Sbjct: 82 ARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGIL-PDNYTFPSLLKACA 140
Query: 120 ACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNS 179
G LH ++ G +++V L+++Y + V SAR VFD++ E V +N+
Sbjct: 141 VAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNA 200
Query: 180 MISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVA--AVLPAVAEVQELRLGMEIQCLGL 237
MI+G + +++ +F +M G +L + +VL + A + L LG I
Sbjct: 201 MITGYARRNRPNEALSLFREM---QGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAK 257
Query: 238 KLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLR 297
K F +V V T L+ ++KCG ++ A +F + D + +AMI Y +GK E S+
Sbjct: 258 KHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSML 317
Query: 298 LFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYS 357
+F ++ + + + T +GL L C H+
Sbjct: 318 MFERMRSENVQPDEITFLGL-----------LNACSHT---------------------- 344
Query: 358 RLNEMEAARKLFDESSEK-----SLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNP 412
+E RK F + K S+ + +M+ ++ G E+A ++ ++P P
Sbjct: 345 --GRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLP---ISPTP 399
Query: 413 VTVSSILSACAQLGAISLGKWVHELV 438
+ +L+AC+ + L + V E +
Sbjct: 400 MLWRILLAACSSHNNLDLAEKVSERI 425
>sp|Q9CA54|PP122_ARATH Pentatricopeptide repeat-containing protein At1g74630
OS=Arabidopsis thaliana GN=PCMP-H71 PE=2 SV=1
Length = 643
Score = 432 bits (1111), Expect = e-120, Method: Compositional matrix adjust.
Identities = 243/674 (36%), Positives = 375/674 (55%), Gaps = 43/674 (6%)
Query: 115 LSAASACCDRSIGVLLHGHAIVSGYGSD-LFVGAALVDLYFKFS-WVKSARKVFDKMPEK 172
LS ++C + +HG I G +D F G ++ S + AR++ PE
Sbjct: 9 LSLLNSCKNLRALTQIHGLFIKYGVDTDSYFTGKLILHCAISISDALPYARRLLLCFPEP 68
Query: 173 DTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEI 232
D ++N+++ G ++ +S+ VF +M+R G + DS S A V+ AV + LR G ++
Sbjct: 69 DAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQM 128
Query: 233 QCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKT 292
C LK G H++V T L+ Y CG VE A +F ++ +P+L++ NA+I+
Sbjct: 129 HCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRGNDV 188
Query: 293 ESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTAL 352
+ +F ++L V N + +
Sbjct: 189 AGAREIFDKML---------------------------------------VRNHTSWNVM 209
Query: 353 STVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNP 412
Y + E+E+A+++F E + SW+ MI G NG E+ F+E+Q + ++PN
Sbjct: 210 LAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNE 269
Query: 413 VTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDL 472
V+++ +LSAC+Q G+ GK +H V+ + + V+ ALIDMY++CGN+ AR +F+
Sbjct: 270 VSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEG 329
Query: 473 MSHKS-EVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVRE 531
M K V+W +MI+G +HG G EA++LF+EM G+ P G++F+S+L+ACSHAGL+ E
Sbjct: 330 MQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEE 389
Query: 532 GDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGAC 591
G++ F M + +P EHY CMVD+ GR+G+L+KA +FI + + P VW LLGAC
Sbjct: 390 GEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQMPIPPTAIVWRTLLGAC 449
Query: 592 MIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPG 651
H + LA ++L ELDP N G VLLSN Y+ + A++R+ + +++ K
Sbjct: 450 SSHGNIELAEQVKQRLNELDPNNSGDLVLLSNAYATAGKWKDVASIRKSMIVQRIKKTTA 509
Query: 652 CTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMR-EAGFQTETVTALHDVEEEEKE 710
+L+EVG T + FT+G++ + L+++ +++ EAG+ E +AL+DVEEEEKE
Sbjct: 510 WSLVEVGKTMYKFTAGEKKKGIDIEAHEKLKEIILRLKDEAGYTPEVASALYDVEEEEKE 569
Query: 711 LMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRF 770
+ HSEKLA+AF L G IRI+KNLR+C DCH K SKV G I+VRD NRF
Sbjct: 570 DQVSKHSEKLALAFALARLSKGANIRIVKNLRICRDCHAVMKLTSKVYGVEILVRDRNRF 629
Query: 771 HHFKGGVCSCGDYW 784
H FK G CSC DYW
Sbjct: 630 HSFKDGSCSCRDYW 643
Score = 207 bits (527), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 155/537 (28%), Positives = 244/537 (45%), Gaps = 54/537 (10%)
Query: 13 LSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKL----AHRLSDFKATCYARALFFSIP 68
LSLL K LTQ H I +G D KL A +SD A YAR L P
Sbjct: 9 LSLLNSCKNLRALTQIHGLFIKYGVDTDSYFTGKLILHCAISISD--ALPYARRLLLCFP 66
Query: 69 KPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGV 128
+PD F+FN ++RG+S ++ P +S+ + + + + PD+F+++FV+ A G
Sbjct: 67 EPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGF 126
Query: 129 LLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNC 188
+H A+ G S LFVG L+ +Y V+ ARKVFD+M + + V WN++I+ +
Sbjct: 127 QMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRGN 186
Query: 189 CFQDSIWVFGDM-VRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYV 247
+ +F M VRN +W
Sbjct: 187 DVAGAREIFDKMLVRNHTSW---------------------------------------- 206
Query: 248 LTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAE 307
+++ Y K GE+E A+ +F ++ D +S + MI G NG S FR+L +
Sbjct: 207 -NVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGM 265
Query: 308 RVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARK 367
N ++ G++ G +H F K+G SV AL +YSR + AR
Sbjct: 266 SPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARL 325
Query: 368 LFDESSEKS-LASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLG 426
+F+ EK + SW +MIAG +G EEA+ LF EM A V P+ ++ S+L AC+ G
Sbjct: 326 VFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAG 385
Query: 427 AISLGK-WVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMS-HKSEVTWNTM 484
I G+ + E+ + + E I ++D+Y + G + +A + M + + W T+
Sbjct: 386 LIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQMPIPPTAIVWRTL 445
Query: 485 ISGYGLHGHGLEALQLFSEMLHSGIRPSG-VTFLSVLYACSHAGLVREGDEIFQSMI 540
+ HG+ A Q+ + SG + LS YA AG ++ I +SMI
Sbjct: 446 LGACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSNAYAT--AGKWKDVASIRKSMI 500
>sp|Q0WSH6|PP312_ARATH Pentatricopeptide repeat-containing protein At4g14850
OS=Arabidopsis thaliana GN=LOI1 PE=1 SV=1
Length = 684
Score = 431 bits (1108), Expect = e-119, Method: Compositional matrix adjust.
Identities = 245/643 (38%), Positives = 356/643 (55%), Gaps = 3/643 (0%)
Query: 144 FVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRN 203
F+ L+++Y K +SAR V P ++ V W S+ISGL +N F ++ F +M R
Sbjct: 43 FLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRRE 102
Query: 204 GGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVER 263
G D T A AVA ++ G +I L +K G V+V Y K +
Sbjct: 103 GVVPNDFTFPCA-FKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDD 161
Query: 264 AELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYP 323
A LF +I +L + NA IS +G+ ++ F + NS T +
Sbjct: 162 ARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSD 221
Query: 324 FGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAM 383
+ HL+L +H L+SG ++ SV L Y + ++ ++ +F E K+ SW ++
Sbjct: 222 WLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSL 281
Query: 384 IAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNF 443
+A Y QN E+A L+ + V + +SS+LSACA + + LG+ +H
Sbjct: 282 VAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACV 341
Query: 444 ESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSE 503
E I+V +AL+DMY KCG I ++ + FD M K+ VT N++I GY G AL LF E
Sbjct: 342 ERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEE 401
Query: 504 MLHSGIRPSG--VTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGR 561
M G P+ +TF+S+L ACS AG V G +IF SM +G +P AEHY+C+VD+LGR
Sbjct: 402 MAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGR 461
Query: 562 AGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLL 621
AG +E+A EFIK + ++P +VWGAL AC +H L +A+E LF+LDP++ G HVLL
Sbjct: 462 AGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHVLL 521
Query: 622 SNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAML 681
SN ++A + +A TVR+ +K + K G + I V H F + D+ H + I L
Sbjct: 522 SNTFAAAGRWAEANTVREELKGVGIKKGAGYSWITVKNQVHAFQAKDRSHILNKEIQTTL 581
Query: 682 EKLNGKMREAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNL 741
KL +M AG++ + +L+D+EEEEK + HSEKLA+AFGL++ IRI KNL
Sbjct: 582 AKLRNEMEAAGYKPDLKLSLYDLEEEEKAAEVSHHSEKLALAFGLLSLPLSVPIRITKNL 641
Query: 742 RVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
R+C DCH+ KF+S R I+VRD NRFH FK G+CSC DYW
Sbjct: 642 RICGDCHSFFKFVSGSVKREIIVRDNNRFHRFKDGICSCKDYW 684
Score = 171 bits (432), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 113/437 (25%), Positives = 214/437 (48%), Gaps = 6/437 (1%)
Query: 60 ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
AR + P ++ + +I G + N +++ + +R+ + P++FT+ A +
Sbjct: 61 ARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRRE-GVVPNDFTFPCAFKAVA 119
Query: 120 ACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNS 179
+ G +H A+ G D+FVG + D+Y K ARK+FD++PE++ WN+
Sbjct: 120 SLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNA 179
Query: 180 MISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKL 239
IS + + +++I F + R G +S + A L A ++ L LGM++ L L+
Sbjct: 180 FISNSVTDGRPREAIEAFIEFRRIDGH-PNSITFCAFLNACSDWLHLNLGMQLHGLVLRS 238
Query: 240 GFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLF 299
GF V V GL+ FY KC ++ +E++F ++ + +S ++++ Y N + E + L+
Sbjct: 239 GFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLY 298
Query: 300 RQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRL 359
+ + I ++ L L IH+ +K+ + V +AL +Y +
Sbjct: 299 LRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKC 358
Query: 360 NEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNP--VTVSS 417
+E + + FDE EK+L + N++I GY G + A++LF+EM P P +T S
Sbjct: 359 GCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVS 418
Query: 418 ILSACAQLGAISLGKWVHELVKSR-NFESNIYVSTALIDMYAKCGNIVEARELFDLMSHK 476
+LSAC++ GA+ G + + ++S E + ++DM + G + A E M +
Sbjct: 419 LLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQ 478
Query: 477 SEVT-WNTMISGYGLHG 492
++ W + + +HG
Sbjct: 479 PTISVWGALQNACRMHG 495
Score = 106 bits (264), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 87/375 (23%), Positives = 169/375 (45%), Gaps = 39/375 (10%)
Query: 60 ARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAAS 119
AR LF IP+ +L +N I + P+ +I + R+ P++ T+ L+A S
Sbjct: 162 ARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDG-HPNSITFCAFLNACS 220
Query: 120 ACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNS 179
++G+ LHG + SG+ +D+ V L+D Y K ++S+ +F +M K+ V W S
Sbjct: 221 DWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCS 280
Query: 180 MISGLMKNCCFQDSIWVFGDMVRNGGTWLDSTS--VAAVLPAVAEVQELRLGMEIQCLGL 237
+++ ++N + + ++ +R+ ++++ +++VL A A + L LG I +
Sbjct: 281 LVAAYVQNHEDEKASVLY---LRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAV 337
Query: 238 KLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLR 297
K ++V + LV Y KCG +E +E F ++ +L++ N++I GY G+ + +L
Sbjct: 338 KACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALA 397
Query: 298 LFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNS-SVLTALSTVY 356
LF ++ G P + F L S C ++G V N + ++ + Y
Sbjct: 398 LFEEMAPRG--------CGPTPNYMTFVSL------LSACSRAGAVENGMKIFDSMRSTY 443
Query: 357 SRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVS 416
E ++ ++ + G+ E A ++M + P
Sbjct: 444 ---------------GIEPGAEHYSCIVDMLGRAGMVERAYEFIKKM---PIQPTISVWG 485
Query: 417 SILSACAQLGAISLG 431
++ +AC G LG
Sbjct: 486 ALQNACRMHGKPQLG 500
Score = 81.6 bits (200), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 120/273 (43%), Gaps = 4/273 (1%)
Query: 27 QTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNE 86
Q H ++ GF D+S L K + +F + + + ++ + N
Sbjct: 230 QLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNH 289
Query: 87 MPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVG 146
+ + Y RK+ T D F S VLSA + +G +H HA+ + +FVG
Sbjct: 290 EDEKASVLYLRSRKDIVETSD-FMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVG 348
Query: 147 AALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNG-G 205
+ALVD+Y K ++ + + FD+MPEK+ V NS+I G ++ +F +M G G
Sbjct: 349 SALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCG 408
Query: 206 TWLDSTSVAAVLPAVAEVQELRLGMEI-QCLGLKLGFHDHVYVLTGLVSFYSKCGEVERA 264
+ + ++L A + + GM+I + G + +V + G VERA
Sbjct: 409 PTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERA 468
Query: 265 -ELLFRDIVRPDLISCNAMISGYTCNGKTESSL 296
E + + ++P + A+ + +GK + L
Sbjct: 469 YEFIKKMPIQPTISVWGALQNACRMHGKPQLGL 501
Score = 54.3 bits (129), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 57/110 (51%), Gaps = 1/110 (0%)
Query: 427 AISLGKWVH-ELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMI 485
++ LG+ VH +VK+ + +++ LI+MY+K + AR + L ++ V+W ++I
Sbjct: 21 SMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLI 80
Query: 486 SGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEI 535
SG +GH AL F EM G+ P+ TF A + L G +I
Sbjct: 81 SGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQI 130
>sp|Q9M2Y7|PP274_ARATH Pentatricopeptide repeat-containing protein At3g49710
OS=Arabidopsis thaliana GN=PCMP-H79 PE=2 SV=1
Length = 721
Score = 428 bits (1101), Expect = e-119, Method: Compositional matrix adjust.
Identities = 247/666 (37%), Positives = 379/666 (56%), Gaps = 24/666 (3%)
Query: 134 AIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDS 193
A S ++F +V Y K S + AR++FD++P+ DTV +N++ISG + D+
Sbjct: 65 AFYSTEEPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISG------YADA 118
Query: 194 IWVFGDMV-----RNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVL 248
F MV R G +D +++ ++ A + + L ++ C + GF + V
Sbjct: 119 RETFAAMVLFKRMRKLGFEVDGFTLSGLIAACCD--RVDLIKQLHCFSVSGGFDSYSSVN 176
Query: 249 TGLVSFYSKCGEVERAELLF--RDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASA 306
V++YSK G + A +F D +R D +S N+MI Y + + +L L+++++
Sbjct: 177 NAFVTYYSKGGLLREAVSVFYGMDELR-DEVSWNSMIVAYGQHKEGAKALALYKEMIFKG 235
Query: 307 ERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRL---NEME 363
+++ T+ ++ HL H +K+G NS V + L YS+ + M
Sbjct: 236 FKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMY 295
Query: 364 AARKLFDESSEKSLASWNAMIAGYTQNG-LTEEAISLFQEMQASKVAPNPVTVSSILSAC 422
+ K+F E L WN MI+GY+ N L+EEA+ F++MQ P+ + + SAC
Sbjct: 296 DSEKVFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSAC 355
Query: 423 AQLGAISLGKWVHELVKSRNFESN-IYVSTALIDMYAKCGNIVEARELFDLMSHKSEVTW 481
+ L + S K +H L + SN I V+ ALI +Y K GN+ +AR +FD M + V++
Sbjct: 356 SNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSF 415
Query: 482 NTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIFQSMIH 541
N MI GY HGHG EAL L+ ML SGI P+ +TF++VL AC+H G V EG E F +M
Sbjct: 416 NCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKE 475
Query: 542 DHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKDTNLAR 601
+P AEHY+CM+D+LGRAG+LE+A FI + +PG W ALLGAC HK+ LA
Sbjct: 476 TFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAE 535
Query: 602 VASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTP 661
A+ +L + P +V+L+N+Y+ R + + A+VR+ ++ +++ K PGC+ IEV
Sbjct: 536 RAANELMVMQPLAATPYVMLANMYADARKWEEMASVRKSMRGKRIRKKPGCSWIEVKKKK 595
Query: 662 HVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTAL---HDVEEEEKELMMKVHSE 718
HVF + D HP + LE++ KM++ G+ + A+ + E ++E+ + HSE
Sbjct: 596 HVFVAEDWSHPMIREVNEYLEEMMKKMKKVGYVMDKKWAMVKEDEAGEGDEEMRLGHHSE 655
Query: 719 KLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGGVC 778
KLA+AFGL++T G E+ ++KNLR+C DCH A KF+S V GR I+VRD RFH FK G C
Sbjct: 656 KLAVAFGLMSTRDGEELVVVKNLRICGDCHNAIKFMSAVAGREIIVRDNLRFHCFKDGKC 715
Query: 779 SCGDYW 784
SCGDYW
Sbjct: 716 SCGDYW 721
Score = 196 bits (498), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 144/491 (29%), Positives = 240/491 (48%), Gaps = 41/491 (8%)
Query: 41 LSTVTKLAHRLSDFKATC----YARALFFSIPKPDLFLFNVIIRGFSN-----------N 85
+++ T L++ + + C YARA F+S +P++F +NVI++ ++ +
Sbjct: 39 VASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEPNVFSYNVIVKAYAKDSKIHIARQLFD 98
Query: 86 EMPKSSICFYTHLRKNTALTPDNFTY---------------SFVLSA-ASACCDR-SIGV 128
E+P+ Y L A + F F LS +ACCDR +
Sbjct: 99 EIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVDGFTLSGLIAACCDRVDLIK 158
Query: 129 LLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPE-KDTVLWNSMISGLMKN 187
LH ++ G+ S V A V Y K ++ A VF M E +D V WNSMI ++
Sbjct: 159 QLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDELRDEVSWNSMIVAYGQH 218
Query: 188 CCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYV 247
++ ++ +M+ G +D ++A+VL A+ + L G + +K GFH + +V
Sbjct: 219 KEGAKALALYKEMIFKGFK-IDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHV 277
Query: 248 LTGLVSFYSKCGEVE---RAELLFRDIVRPDLISCNAMISGYTCNGK-TESSLRLFRQLL 303
+GL+ FYSKCG + +E +F++I+ PDL+ N MISGY+ N + +E +++ FRQ+
Sbjct: 278 GSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQ 337
Query: 304 ASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNS-SVLTALSTVYSRLNEM 362
R + + V + IH +KS I SN SV AL ++Y + +
Sbjct: 338 RIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNL 397
Query: 363 EAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSAC 422
+ AR +FD E + S+N MI GY Q+G EA+ L+Q M S +APN +T ++LSAC
Sbjct: 398 QDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSAC 457
Query: 423 AQLGAISLGK-WVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHK-SEVT 480
A G + G+ + + + ++ E + +ID+ + G + EA D M +K V
Sbjct: 458 AHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVA 517
Query: 481 WNTMISGYGLH 491
W ++ H
Sbjct: 518 WAALLGACRKH 528
Score = 131 bits (329), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 106/377 (28%), Positives = 170/377 (45%), Gaps = 39/377 (10%)
Query: 203 NGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCG--- 259
N W T +L +VAE ++L G + L +K Y+ V+ YSKCG
Sbjct: 2 NQTPWKFKTFRDLLLKSVAE-RDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLS 60
Query: 260 ----------------------------EVERAELLFRDIVRPDLISCNAMISGYTCNGK 291
++ A LF +I +PD +S N +ISGY +
Sbjct: 61 YARAAFYSTEEPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARE 120
Query: 292 TESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTA 351
T +++ LF+++ V+ T+ GLI + L +H F + G S SSV A
Sbjct: 121 TFAAMVLFKRMRKLGFEVDGFTLSGLIAA--CCDRVDLIKQLHCFSVSGGFDSYSSVNNA 178
Query: 352 LSTVYSRLNEMEAARKLFDESSE-KSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAP 410
T YS+ + A +F E + SWN+MI Y Q+ +A++L++EM
Sbjct: 179 FVTYYSKGGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKI 238
Query: 411 NPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCG---NIVEAR 467
+ T++S+L+A L + G+ H + F N +V + LID Y+KCG + ++
Sbjct: 239 DMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSE 298
Query: 468 ELFDLMSHKSEVTWNTMISGYGLHGH-GLEALQLFSEMLHSGIRPSGVTFLSVLYACSHA 526
++F + V WNTMISGY ++ EA++ F +M G RP +F+ V ACS+
Sbjct: 299 KVFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNL 358
Query: 527 GLVREGDEIFQSMIHDH 543
+ +I I H
Sbjct: 359 SSPSQCKQIHGLAIKSH 375
>sp|Q9CAA8|PP108_ARATH Putative pentatricopeptide repeat-containing protein At1g68930
OS=Arabidopsis thaliana GN=PCMP-H22 PE=3 SV=1
Length = 743
Score = 426 bits (1096), Expect = e-118, Method: Compositional matrix adjust.
Identities = 228/674 (33%), Positives = 362/674 (53%), Gaps = 32/674 (4%)
Query: 142 DLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMV 201
+LF L+ Y K + F+K+P++D V WN +I G + ++ + M+
Sbjct: 71 NLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMM 130
Query: 202 RNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSK---- 257
R+ L ++ +L + + LG +I +KLGF ++ V + L+ Y+
Sbjct: 131 RDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCI 190
Query: 258 ---------------------------CGEVERAELLFRDIVRPDLISCNAMISGYTCNG 290
CG +E A LFR + + D +S AMI G NG
Sbjct: 191 SDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEK-DSVSWAAMIKGLAQNG 249
Query: 291 KTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLT 350
+ ++ FR++ +++ ++P G ++ IH+ +++ + V +
Sbjct: 250 LAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGS 309
Query: 351 ALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAP 410
AL +Y + + A+ +FD +K++ SW AM+ GY Q G EEA+ +F +MQ S + P
Sbjct: 310 ALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDP 369
Query: 411 NPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELF 470
+ T+ +SACA + ++ G H + + VS +L+ +Y KCG+I ++ LF
Sbjct: 370 DHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLF 429
Query: 471 DLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVR 530
+ M+ + V+W M+S Y G +E +QLF +M+ G++P GVT V+ ACS AGLV
Sbjct: 430 NEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVE 489
Query: 531 EGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGA 590
+G F+ M ++G P HY+CM+D+ R+G+LE+A+ FI G+ P W LL A
Sbjct: 490 KGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSA 549
Query: 591 CMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAP 650
C + + + A+E L ELDP + + LLS+IY+++ + A +R+ ++++ + K P
Sbjct: 550 CRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKKEP 609
Query: 651 GCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKE 710
G + I+ G H F++ D+ P IYA LE+LN K+ + G++ +T HDVEE K
Sbjct: 610 GQSWIKWKGKLHSFSADDESSPYLDQIYAKLEELNNKIIDNGYKPDTSFVHHDVEEAVKV 669
Query: 711 LMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRF 770
M+ HSE+LAIAFGLI G IR+ KNLRVC+DCH ATK IS VTGR I+VRDA RF
Sbjct: 670 KMLNYHSERLAIAFGLIFVPSGQPIRVGKNLRVCVDCHNATKHISSVTGREILVRDAVRF 729
Query: 771 HHFKGGVCSCGDYW 784
H FK G CSCGD+W
Sbjct: 730 HRFKDGTCSCGDFW 743
Score = 189 bits (480), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 137/570 (24%), Positives = 263/570 (46%), Gaps = 66/570 (11%)
Query: 18 GAKTQSQLTQ-THAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSIPKPDLF--- 73
GA+ QS+ + H II + + H + K++ YAR +F IP+P+LF
Sbjct: 17 GARNQSRYVKMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWN 76
Query: 74 ----------------------------LFNVIIRGFSNNEMPKSSICFYTHLRKNTALT 105
+NV+I G+S + + +++ Y + ++ +
Sbjct: 77 NLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSAN 136
Query: 106 PDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKV 165
T +L +S+ S+G +HG I G+ S L VG+ L+ +Y + A+KV
Sbjct: 137 LTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKV 196
Query: 166 FDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTW------------------ 207
F + +++TV++NS++ GL+ +D++ +F M ++ +W
Sbjct: 197 FYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIE 256
Query: 208 -----------LDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYS 256
+D +VLPA + + G +I ++ F DH+YV + L+ Y
Sbjct: 257 CFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYC 316
Query: 257 KCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVG 316
KC + A+ +F + + +++S AM+ GY G+ E ++++F + S + T+
Sbjct: 317 KCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQ 376
Query: 317 LIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKS 376
I L + H + SG++ +V +L T+Y + +++ + +LF+E + +
Sbjct: 377 AISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRD 436
Query: 377 LASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHE 436
SW AM++ Y Q G E I LF +M + P+ VT++ ++SAC++ G + G+ +
Sbjct: 437 AVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFK 496
Query: 437 LVKSR-NFESNIYVSTALIDMYAKCGNIVEARELFDLMSHKSE-VTWNTMISGYGLHGHG 494
L+ S +I + +ID++++ G + EA + M + + W T++S G+
Sbjct: 497 LMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGN- 555
Query: 495 LEALQLFSEML--HSGIRPSGVTFLSVLYA 522
LE + +E L P+G T LS +YA
Sbjct: 556 LEIGKWAAESLIELDPHHPAGYTLLSSIYA 585
Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 89/211 (42%), Gaps = 39/211 (18%)
Query: 410 PNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEAREL 469
P ++I+ A A + + + + V + + + N++ L+ Y+K G I E
Sbjct: 39 PETFLYNNIVHAYALMKSSTYARRVFDRIP----QPNLFSWNNLLLAYSKAGLISEMEST 94
Query: 470 FDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHS-GIRPSGVTFLSVLYACSHAGL 528
F+ + + VTWN +I GY L G A++ ++ M+ + VT +++L S G
Sbjct: 95 FEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTMLKLSSSNGH 154
Query: 529 VREGDEIFQSMIHDHGFK-------PLAEHYA---CMVD------------------ILG 560
V G +I +I GF+ PL YA C+ D ++G
Sbjct: 155 VSLGKQIHGQVI-KLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMG 213
Query: 561 ---RAGQLEKALEFIKGLAVEPGPAVWGALL 588
G +E AL+ +G+ E W A++
Sbjct: 214 GLLACGMIEDALQLFRGM--EKDSVSWAAMI 242
>sp|Q9STE1|PP333_ARATH Pentatricopeptide repeat-containing protein At4g21300
OS=Arabidopsis thaliana GN=PCMP-E36 PE=3 SV=1
Length = 857
Score = 424 bits (1089), Expect = e-117, Method: Compositional matrix adjust.
Identities = 234/673 (34%), Positives = 380/673 (56%), Gaps = 15/673 (2%)
Query: 43 TVTKLAHRLSDFKATCYARA------------LFFSIPKPDLFLFNVIIRGFSNNEMPKS 90
TV+ L ++F A+ +A LF + + D ++NV++ G++ S
Sbjct: 163 TVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDS 222
Query: 91 SICFYTHLRKNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAALV 150
I ++ +R + ++P+ T+ VLS ++ +GV LHG +VSG + + +L+
Sbjct: 223 VIKGFSVMRMDQ-ISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLL 281
Query: 151 DLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLDS 210
+Y K A K+F M DTV WN MISG +++ ++S+ F +M+ + G D+
Sbjct: 282 SMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMI-SSGVLPDA 340
Query: 211 TSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRD 270
+ +++LP+V++ + L +I C ++ +++ + L+ Y KC V A+ +F
Sbjct: 341 ITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQ 400
Query: 271 IVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLT 330
D++ AMISGY NG SL +FR L+ N T+V ++PV L L
Sbjct: 401 CNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLG 460
Query: 331 NCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQN 390
+H F +K G + ++ A+ +Y++ M A ++F+ S++ + SWN+MI Q+
Sbjct: 461 RELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQS 520
Query: 391 GLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVS 450
AI +F++M S + + V++S+ LSACA L + S GK +H + + S++Y
Sbjct: 521 DNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSE 580
Query: 451 TALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLH-SGI 509
+ LIDMYAKCGN+ A +F M K+ V+WN++I+ G HG ++L LF EM+ SGI
Sbjct: 581 STLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGI 640
Query: 510 RPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKAL 569
RP +TFL ++ +C H G V EG F+SM D+G +P EHYAC+VD+ GRAG+L +A
Sbjct: 641 RPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAY 700
Query: 570 EFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAER 629
E +K + P VWG LLGAC +HK+ LA VAS KL +LDP N GY+VL+SN ++ R
Sbjct: 701 ETVKSMPFPPDAGVWGTLLGACRLHKNVELAEVASSKLMDLDPSNSGYYVLISNAHANAR 760
Query: 630 DYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMR 689
++ VR ++K+R++ K PG + IE+ H+F SGD HP+S+ IY++L L G++R
Sbjct: 761 EWESVTKVRSLMKEREVQKIPGYSWIEINKRTHLFVSGDVNHPESSHIYSLLNSLLGELR 820
Query: 690 EAGFQTETVTALH 702
G+ + LH
Sbjct: 821 LEGYIPQPYLPLH 833
Score = 88.2 bits (217), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 100/205 (48%), Gaps = 2/205 (0%)
Query: 333 IHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFD--ESSEKSLASWNAMIAGYTQN 390
+H+F + + I +S + +Y+ K+F + S+ WN++I+ + +N
Sbjct: 57 VHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRRSSIRPWNSIISSFVRN 116
Query: 391 GLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVS 450
GL +A++ + +M V+P+ T ++ AC L ++ + V S + N +V+
Sbjct: 117 GLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDFLSDTVSSLGMDCNEFVA 176
Query: 451 TALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIR 510
++LI Y + G I +LFD + K V WN M++GY G ++ FS M I
Sbjct: 177 SSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQIS 236
Query: 511 PSGVTFLSVLYACSHAGLVREGDEI 535
P+ VTF VL C+ L+ G ++
Sbjct: 237 PNAVTFDCVLSVCASKLLIDLGVQL 261
Score = 54.3 bits (129), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 57/115 (49%), Gaps = 4/115 (3%)
Query: 412 PVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELF- 470
P +S +L AC+ + GK VH + + + Y ++ MYA CG+ + ++F
Sbjct: 35 PRRLSLLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFY 94
Query: 471 --DLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYAC 523
DL S WN++IS + +G +AL + +ML G+ P TF ++ AC
Sbjct: 95 RLDL-RRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKAC 148
>sp|Q9FND6|PP411_ARATH Pentatricopeptide repeat-containing protein At5g40410,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H15 PE=2
SV=1
Length = 608
Score = 419 bits (1077), Expect = e-116, Method: Compositional matrix adjust.
Identities = 217/577 (37%), Positives = 333/577 (57%), Gaps = 3/577 (0%)
Query: 211 TSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRD 270
+V++++ AV + L + C +K + H ++ LV Y + G AE LF +
Sbjct: 32 ANVSSLIAAVKSCVSIELCRLLHCKVVKSVSYRHGFIGDQLVGCYLRLGHDVCAEKLFDE 91
Query: 271 IVRPDLISCNAMISGYTCNGKTESSLRLFRQLLAS--AERVNSSTIVGLIPVFYPFGHLH 328
+ DL+S N++ISGY+ G + +++ S R N T + +I G
Sbjct: 92 MPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKE 151
Query: 329 LTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYT 388
CIH +K G++ V+ A Y + ++ ++ KLF++ S K+L SWN MI +
Sbjct: 152 EGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHL 211
Query: 389 QNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIY 448
QNGL E+ ++ F + P+ T ++L +C +G + L + +H L+ F N
Sbjct: 212 QNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKC 271
Query: 449 VSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSG 508
++TAL+D+Y+K G + ++ +F ++ + W M++ Y HG G +A++ F M+H G
Sbjct: 272 ITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVHYG 331
Query: 509 IRPSGVTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKA 568
I P VTF +L ACSH+GLV EG F++M + P +HY+CMVD+LGR+G L+ A
Sbjct: 332 ISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDA 391
Query: 569 LEFIKGLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAE 628
IK + +EP VWGALLGAC ++KDT L A+E+LFEL+P + +V+LSNIYSA
Sbjct: 392 YGLIKEMPMEPSSGVWGALLGACRVYKDTQLGTKAAERLFELEPRDGRNYVMLSNIYSAS 451
Query: 629 RDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKM 688
+ A+ +R ++K++ L +A GC+ IE G H F GD HP+S I L+++ KM
Sbjct: 452 GLWKDASRIRNLMKQKGLVRASGCSYIEHGNKIHKFVVGDWSHPESEKIQKKLKEIRKKM 511
Query: 689 R-EAGFQTETVTALHDVEEEEKELMMKVHSEKLAIAFGLIATEPGTEIRIIKNLRVCLDC 747
+ E G++++T LHDV E+ KE M+ HSEK+A+AFGL+ P I I KNLR+C DC
Sbjct: 512 KSEMGYKSKTEFVLHDVGEDVKEEMINQHSEKIAMAFGLLVVSPMEPIIIRKNLRICGDC 571
Query: 748 HTATKFISKVTGRVIVVRDANRFHHFKGGVCSCGDYW 784
H K IS + R I++RD+ RFHHF G CSC DYW
Sbjct: 572 HETAKAISLIEKRRIIIRDSKRFHHFLDGSCSCSDYW 608
Score = 138 bits (347), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 101/400 (25%), Positives = 177/400 (44%), Gaps = 9/400 (2%)
Query: 95 YTHLRKNTALTPDNFTYSF------VLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAA 148
+ L + L+ +F +S +++A +C + LLH + S F+G
Sbjct: 12 FRFLYRRRFLSQSSFVHSLDANVSSLIAAVKSCVSIELCRLLHCKVVKSVSYRHGFIGDQ 71
Query: 149 LVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGD-MVRNGGTW 207
LV Y + A K+FD+MPE+D V WNS+ISG V M+ G
Sbjct: 72 LVGCYLRLGHDVCAEKLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFR 131
Query: 208 LDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELL 267
+ + +++ A G I L +K G + V V+ +++Y K G++ + L
Sbjct: 132 PNEVTFLSMISACVYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKL 191
Query: 268 FRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHL 327
F D+ +L+S N MI + NG E L F + +T + ++ G +
Sbjct: 192 FEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVV 251
Query: 328 HLTNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGY 387
L IH + G N + TAL +YS+L +E + +F E + +W AM+A Y
Sbjct: 252 RLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAY 311
Query: 388 TQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSR-NFESN 446
+G +AI F+ M ++P+ VT + +L+AC+ G + GK E + R +
Sbjct: 312 ATHGFGRDAIKHFELMVHYGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPR 371
Query: 447 IYVSTALIDMYAKCGNIVEARELFDLMSHK-SEVTWNTMI 485
+ + ++D+ + G + +A L M + S W ++
Sbjct: 372 LDHYSCMVDLLGRSGLLQDAYGLIKEMPMEPSSGVWGALL 411
Score = 98.2 bits (243), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 109/453 (24%), Positives = 191/453 (42%), Gaps = 66/453 (14%)
Query: 35 HGFQND--LSTVTKLAHRLSDFKATCYARALFFSIPKPDLFLFNVIIRGFSNNEMPKSSI 92
HGF D + +L H + A LF +P+ DL +N +I G+S
Sbjct: 65 HGFIGDQLVGCYLRLGHDVC-------AEKLFDEMPERDLVSWNSLISGYSGRGYLGK-- 115
Query: 93 CFYTHLR---KNTALTPDNFTYSFVLSAASACCDRSIGVLLHGHAIVSGYGSDLFVGAAL 149
CF R P+ T+ ++SA + G +HG + G ++ V A
Sbjct: 116 CFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEEGRCIHGLVMKFGVLEEVKVVNAF 175
Query: 150 VDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGLMKNCCFQDSIWVFGDMVRNGGTWLD 209
++ Y K + S+ K+F+ + K+ V WN+MI ++N + + F +M R G D
Sbjct: 176 INWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYF-NMSRRVGHEPD 234
Query: 210 STSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDHVYVLTGLVSFYSKCGEVERAELLFR 269
+ AVL + ++ +RL I L + GF + + T L+ YSK G +E + +F
Sbjct: 235 QATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTVFH 294
Query: 270 DIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLASAERVNSSTIVGLIPVFYPFGHLHL 329
+I PD ++ AM++ Y +G +++ F ++ G+ P F HL L
Sbjct: 295 EITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVH----------YGISPDHVTFTHL-L 343
Query: 330 TNCIHSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEK-----SLASWNAMI 384
C H SG+V E + F+ S++ L ++ M+
Sbjct: 344 NACSH-----SGLV-------------------EEGKHYFETMSKRYRIDPRLDHYSCMV 379
Query: 385 AGYTQNGLTEEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELV------ 438
++GL ++A L +EM + P+ ++L AC LG E +
Sbjct: 380 DLLGRSGLLQDAYGLIKEMP---MEPSSGVWGALLGACRVYKDTQLGTKAAERLFELEPR 436
Query: 439 KSRNFE--SNIYVSTALIDMYAKCGNIVEAREL 469
RN+ SNIY ++ L ++ N+++ + L
Sbjct: 437 DGRNYVMLSNIYSASGLWKDASRIRNLMKQKGL 469
>sp|Q9LZ19|PP364_ARATH Pentatricopeptide repeat-containing protein At5g04780
OS=Arabidopsis thaliana GN=PCMP-H16 PE=2 SV=2
Length = 635
Score = 415 bits (1066), Expect = e-115, Method: Compositional matrix adjust.
Identities = 213/548 (38%), Positives = 325/548 (59%)
Query: 237 LKLGFHDHVYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSL 296
+++ V +L L++ YSKCG VE A +F ++ L+S N MI YT N +L
Sbjct: 88 IRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEAL 147
Query: 297 RLFRQLLASAERVNSSTIVGLIPVFYPFGHLHLTNCIHSFCLKSGIVSNSSVLTALSTVY 356
+F ++ + + TI ++ +H +K+ I N V TAL +Y
Sbjct: 148 DIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLY 207
Query: 357 SRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLTEEAISLFQEMQASKVAPNPVTVS 416
++ ++ A ++F+ +KS +W++M+AGY QN EEA+ L++ Q + N T+S
Sbjct: 208 AKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLS 267
Query: 417 SILSACAQLGAISLGKWVHELVKSRNFESNIYVSTALIDMYAKCGNIVEARELFDLMSHK 476
S++ AC+ L A+ GK +H ++ F SN++V+++ +DMYAKCG++ E+ +F + K
Sbjct: 268 SVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEK 327
Query: 477 SEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSGVTFLSVLYACSHAGLVREGDEIF 536
+ WNT+ISG+ H E + LF +M G+ P+ VTF S+L C H GLV EG F
Sbjct: 328 NLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFF 387
Query: 537 QSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIKGLAVEPGPAVWGALLGACMIHKD 596
+ M +G P HY+CMVDILGRAG L +A E IK + +P ++WG+LL +C ++K+
Sbjct: 388 KLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLASCRVYKN 447
Query: 597 TNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIE 656
LA VA+EKLFEL+PEN G HVLLSNIY+A + + + A R++++ + K G + I+
Sbjct: 448 LELAEVAAEKLFELEPENAGNHVLLSNIYAANKQWEEIAKSRKLLRDCDVKKVRGKSWID 507
Query: 657 VGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTALHDVEEEEKELMMKVH 716
+ H F+ G+ HP+ I + L+ L K R+ G++ LHDVE +KE ++ H
Sbjct: 508 IKDKVHTFSVGESGHPRIREICSTLDNLVIKFRKFGYKPSVEHELHDVEIGKKEELLMQH 567
Query: 717 SEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKGG 776
SEKLA+ FGL+ + +RI+KNLR+C+DCH K S T R I+VRD NRFHHF G
Sbjct: 568 SEKLALVFGLMCLPESSPVRIMKNLRICVDCHEFMKAASMATRRFIIVRDVNRFHHFSDG 627
Query: 777 VCSCGDYW 784
CSCGD+W
Sbjct: 628 HCSCGDFW 635
Score = 134 bits (337), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 90/291 (30%), Positives = 147/291 (50%), Gaps = 4/291 (1%)
Query: 334 HSFCLKSGIVSNSSVLTALSTVYSRLNEMEAARKLFDESSEKSLASWNAMIAGYTQNGLT 393
H ++ + + ++L L YS+ +E AR++FD E+SL SWN MI YT+N +
Sbjct: 84 HGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRME 143
Query: 394 EEAISLFQEMQASKVAPNPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIYVSTAL 453
EA+ +F EM+ + T+SS+LSAC K +H L + N+YV TAL
Sbjct: 144 SEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTAL 203
Query: 454 IDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSGIRPSG 513
+D+YAKCG I +A ++F+ M KS VTW++M++GY + + EAL L+ + +
Sbjct: 204 LDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQ 263
Query: 514 VTFLSVLYACSHAGLVREGDEIFQSMIHDHGFKPLAEHYACMVDILGRAGQLEKALEFIK 573
T SV+ ACS+ + EG ++ ++I GF + VD+ + G L ++ I
Sbjct: 264 FTLSSVICACSNLAALIEGKQM-HAVICKSGFGSNVFVASSAVDMYAKCGSLRESY-IIF 321
Query: 574 GLAVEPGPAVWGALLGACMIHKDTNLARVASEKLFE--LDPENVGYHVLLS 622
E +W ++ H + EK+ + + P V + LLS
Sbjct: 322 SEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLS 372
Score = 113 bits (282), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 109/447 (24%), Positives = 203/447 (45%), Gaps = 26/447 (5%)
Query: 8 SRNLFLSLLKGAKTQSQLTQT---HAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALF 64
+RNL +L+ + + H +II + D++ + L + S AR +F
Sbjct: 60 NRNLVHEILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVF 119
Query: 65 FSIPKPDLFLFNVIIRGFSNNEMPKSSICFYTHLRKNTALTPDNFTYSFVLSAASACCDR 124
+ + L +N +I ++ N M ++ + +R N FT S VLSA CD
Sbjct: 120 DGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMR-NEGFKFSEFTISSVLSACGVNCDA 178
Query: 125 SIGVLLHGHAIVSGYGSDLFVGAALVDLYFKFSWVKSARKVFDKMPEKDTVLWNSMISGL 184
LH ++ + +L+VG AL+DLY K +K A +VF+ M +K +V W+SM++G
Sbjct: 179 LECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGY 238
Query: 185 MKNCCFQDSIWVFGDMVRNGGTWLDSTSVAAVLPAVAEVQELRLGMEIQCLGLKLGFHDH 244
++N +++++ ++ R + ++++V+ A + + L G ++ + K GF +
Sbjct: 239 VQNKNYEEALLLYRRAQRMSLEQ-NQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSN 297
Query: 245 VYVLTGLVSFYSKCGEVERAELLFRDIVRPDLISCNAMISGYTCNGKTESSLRLFRQLLA 304
V+V + V Y+KCG + + ++F ++ +L N +ISG+ + + + + LF ++
Sbjct: 298 VFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQ 357
Query: 305 SAERVNSSTIVGLIPVFYPFGHLHLTNCIHSF--CLKS--GIVSNSSVLTALSTVYSRLN 360
N T L+ V GH L F +++ G+ N + + + R
Sbjct: 358 DGMHPNEVTFSSLLSV---CGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAG 414
Query: 361 EMEAARKLFDESSEKSLAS-WNAMIAG---YTQNGLTEEAISLFQEMQASKVAPNPVTVS 416
+ A +L AS W +++A Y L E A E++ A N V +S
Sbjct: 415 LLSEAYELIKSIPFDPTASIWGSLLASCRVYKNLELAEVAAEKLFELEPEN-AGNHVLLS 473
Query: 417 SILSACAQLGAISLGKWVHELVKSRNF 443
+I +A Q W E+ KSR
Sbjct: 474 NIYAANKQ--------W-EEIAKSRKL 491
Score = 75.5 bits (184), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 69/135 (51%), Gaps = 8/135 (5%)
Query: 397 ISLFQEMQASKVAP--------NPVTVSSILSACAQLGAISLGKWVHELVKSRNFESNIY 448
IS+ +V+P N V IL CA+ GA+ K H + + E ++
Sbjct: 38 ISVLASYDQEEVSPGRYSNEFSNRNLVHEILQLCARNGAVMEAKACHGKIIRIDLEGDVT 97
Query: 449 VSTALIDMYAKCGNIVEARELFDLMSHKSEVTWNTMISGYGLHGHGLEALQLFSEMLHSG 508
+ LI+ Y+KCG + AR++FD M +S V+WNTMI Y + EAL +F EM + G
Sbjct: 98 LLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEG 157
Query: 509 IRPSGVTFLSVLYAC 523
+ S T SVL AC
Sbjct: 158 FKFSEFTISSVLSAC 172
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.135 0.405
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 278,866,967
Number of Sequences: 539616
Number of extensions: 11189621
Number of successful extensions: 35781
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 376
Number of HSP's successfully gapped in prelim test: 87
Number of HSP's that attempted gapping in prelim test: 27787
Number of HSP's gapped (non-prelim): 2188
length of query: 784
length of database: 191,569,459
effective HSP length: 126
effective length of query: 658
effective length of database: 123,577,843
effective search space: 81314220694
effective search space used: 81314220694
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 65 (29.6 bits)