Query 044148
Match_columns 996
No_of_seqs 126 out of 136
Neff 4.7
Searched_HMMs 46136
Date Fri Mar 29 11:53:50 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/044148.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/044148hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF11145 DUF2921: Protein of u 100.0 1E-223 2E-228 1985.7 71.1 841 25-946 2-907 (909)
2 PF11145 DUF2921: Protein of u 100.0 1.7E-28 3.7E-33 297.8 21.4 271 137-442 312-614 (909)
3 KOG0828 Predicted E3 ubiquitin 99.9 5.1E-24 1.1E-28 238.2 6.9 304 627-974 227-566 (636)
4 PF06191 DUF995: Protein of un 20.2 74 0.0016 32.9 2.4 26 368-393 65-91 (145)
5 smart00679 CTNS Repeated motif 19.6 40 0.00086 25.2 0.2 23 854-877 3-25 (32)
6 PF14273 DUF4360: Domain of un 16.4 4.5E+02 0.0098 28.0 7.2 64 113-213 8-71 (184)
7 PF05095 DUF687: Protein of un 16.0 89 0.0019 38.3 2.1 131 586-748 186-335 (541)
8 PF08693 SKG6: Transmembrane a 15.0 1.3E+02 0.0028 25.0 2.1 18 919-936 15-32 (40)
9 KOG2257 N-acetylglucosaminyltr 10.0 1.3E+02 0.0028 30.8 0.9 26 916-941 46-71 (135)
10 KOG4581 Predicted membrane pro 8.9 74 0.0016 35.2 -1.3 23 735-757 229-251 (359)
No 1
>PF11145 DUF2921: Protein of unknown function (DUF2921); InterPro: IPR021319 This eukaryotic family of proteins has no known function.
Probab=100.00 E-value=1e-223 Score=1985.72 Aligned_cols=841 Identities=42% Similarity=0.709 Sum_probs=742.8
Q ss_pred Hhccccccccccccccc-cchhhhhccCcccccCCccccCCCCCcccccCCCCCCCCCCCCceeeEEEEEeccccccccc
Q 044148 25 KKHCISVLSSATELRAE-SDRIYRIRDEVNFVFGDWEQEMGIAPIMPFDDSDVRKDSPRTPEKIASFWVMDVDRDHRSKK 103 (996)
Q Consensus 25 ~~~c~s~lssa~el~~~-~~~~~~~~~el~f~~gdw~q~~g~~pl~pf~~~~~~~~~~~~~~~lasf~vt~vd~~~r~~~ 103 (996)
|+||.|++++|+|++.+ ++++...+.||+|++|||+| +|++||||||+++.+. +++++|||+|||+..+|.+|
T Consensus 2 ~~hC~svvp~a~~l~~~~~~~~~~~s~~L~~~~ggyfq-~GGd~Lfp~d~s~~~~-----~~r~~SF~~~~V~~T~~~~~ 75 (909)
T PF11145_consen 2 KRHCASVVPSASELKDDDDTRSLLISFELSFFNGGYFQ-AGGDPLFPFDDSDSPS-----SLRSFSFWPTHVDRTTRPGK 75 (909)
T ss_pred cccccCCCCCccccccccCcccccccccccCCCCCeec-CCCCCCCCCCcccccc-----ccceEEEEeeeeccccCCCc
Confidence 78999999999999755 47889999999999999999 9999999999999962 39999999999999999999
Q ss_pred eeeeceEEEEEEeeeccccC-CCC---CCCCCeeeeCCceeEEEEEEEEEeeecCCCCceeEEEEeecCCCCCCCCCCCC
Q 044148 104 YVGVSGELYMGITLDESFAE-RPY---GGNPQFQMWPNHTQLTMTFQGIYTESKKNGGEIVLCLLGTAMLPSRESESNNP 179 (996)
Q Consensus 104 ~v~vsg~l~l~isr~~~~~~-~~y---~~sp~f~~~pg~s~ltf~lEG~Yses~~~~ge~~LCMVG~~~lp~r~~ds~~p 179 (996)
+++|+|+|+|+|||+++.++ +.| .++|+|++|||+++|+|.|||+|||+ ||+|||||+|+.
T Consensus 76 vv~Vsg~LtL~isr~~~~~~~~~~~~~~~~~~~~~~pg~ssLsf~LeG~YSe~-----sg~LCMVGsgs~---------- 140 (909)
T PF11145_consen 76 VVKVSGTLTLSISRNSARSSYYYYDHRRRSPEFYRWPGRSSLSFSLEGFYSEG-----SGVLCMVGSGSG---------- 140 (909)
T ss_pred EEEEEEEEEEEeecCCCCccccccccccCCcceecCCCceEEEEEEEEEEEcC-----CCcEEEeccccc----------
Confidence 99999999999999999888 333 37999999999999999999999994 488999999943
Q ss_pred cccccCCCCCCCCCCCcccCcEEEEEecCCccccccceEEEEEEecCCCCCCCCCceEEEeeecCCCCceeecccccccc
Q 044148 180 WEWMKGSGPSYYQPPLLQDDQILLVLHFPLTFTLTNMVIKGEMSSLNPKSNPKYFDKVHILSQHGRSARYEFGTDKIVSK 259 (996)
Q Consensus 180 w~~~k~~~~~~~qp~~~~d~~i~L~LryP~~~sLt~r~V~G~LeS~n~~~d~~YFd~VsIls~~g~~~~YeY~~~~~vsk 259 (996)
++.+|||+..|++|+|+||||+++|||+|+|+|+|||+|+++|++|||||+|++|++.+++|+|+ ++++
T Consensus 141 --------~s~~g~~v~~~~~~vL~LryPk~~sLtsr~V~G~LeS~n~~~d~~YFd~VsLls~~~~~~~Y~Y~---lv~~ 209 (909)
T PF11145_consen 141 --------YSNDGPPVKLDDNAVLVLRYPKPSSLTSRFVTGELESLNSKSDSAYFDPVSLLSQLEGYSNYEYT---LVSK 209 (909)
T ss_pred --------cCCCCCceeeecceEEEEcCCCcccccccceeEEEEecCCCCCccccceeEEEecCCCccCceEE---Eccc
Confidence 46778999999999999999999999999999999999999999999999999999888999993 5688
Q ss_pred cCCCCCCcchhcc---CcccccccccccccccccccCCceeEeecCCCCCCcCccccccccccCccccccCCCCCceEEE
Q 044148 260 ACNPYPVEDSFMK---GGIDIYKGIGFCEVLQQVTNEGAFTVVPNWKCNGTDNFCSKMGPFGLNKEIQATDGSFKDVKIF 336 (996)
Q Consensus 260 ~C~~~~~~d~~~~---~g~~~y~~~~~C~il~~~~~~~~f~l~~~~~C~st~~~Cs~lgPF~~d~~~~~t~~~~p~~~m~ 336 (996)
+|+++++.|.+.. .+.++|.++++|++|++.+.+ +|+|+|+|+||++++.|+++|||.. .+++|+
T Consensus 210 sc~~~~~~d~~~~~~~~~~~~~~~~~~C~~L~~~~~~-~f~l~y~~~C~st~~~~~~~gp~~~-----------~~~~m~ 277 (909)
T PF11145_consen 210 SCDPPPYGDGDVGDGSSLSDVYSGNFFCSILRRFLRG-SFKLEYNWDCNSTDACCSFGGPFGL-----------LPVRMH 277 (909)
T ss_pred cCCCCcccccccccccccccccCCCCCChhhHhcCCC-ceEeEECCCCCCcccccCCCCCccc-----------CCceEE
Confidence 8999887654422 234578999999999999865 7999999999999999999999965 355699
Q ss_pred EeeeeeecccCCCCCCceEEEe-----------eecccccCCCcceEEEeeeeeCCCCeEEEEeeccc------ccCCCC
Q 044148 337 MQNVKCEQTYGKGNSSSAKVAA-----------YAATLRSGISNMTLAAEGLWKSSSGQLCMVGCVGL------VNAEGS 399 (996)
Q Consensus 337 ~q~i~C~~~~~~~~~~a~rv~a-----------~~a~~r~g~~~~~l~AEGvwd~~tg~LCmVgCr~l------~~s~~~ 399 (996)
||++||+++ ++|||++ ++...|+|++++||+|||+||+++|||||||||++ ++++++
T Consensus 278 ~~~v~C~~~------g~vrv~~vF~~~~~~e~~~~~~~r~gl~~~tLvAEG~Wd~s~gqLCmvaCrv~~~~~s~~~~~v~ 351 (909)
T PF11145_consen 278 MQQVRCEED------GAVRVSAVFRNVSPSEHYYPARPRTGLSNMTLVAEGVWDSSSGQLCMVACRVGNSDDSLANAGVG 351 (909)
T ss_pred EEeeEecCC------CcEEEEEEEcCCCchhhcccccccccccCceEEEEeeEcCCCCcEEEEeeeeccccccccccccC
Confidence 999999997 6789998 34444778899999999999999999999999875 235689
Q ss_pred CcceeEEEEcccceeeeccceEEEEEEecCCCCCcccceeeeeeecccccccccCC-----CCCccccchhhhhhhhhhc
Q 044148 400 SCNSQICMYIPTSFSIKQRSIIVGSFSSINKSSLSYFPLAFEKFVQPTELWNYFRT-----SNPHYSYSKIDKAGIVLEK 474 (996)
Q Consensus 400 DC~I~lsl~FPa~~Si~~Rs~i~G~I~S~r~~sd~f~pl~F~~~v~~s~l~n~~~~-----s~~kY~YT~vd~A~k~c~r 474 (996)
||+|||+||||++|||||||+|+|+|||++. ++.++|+.|+++++|+++|+.+++ +++||+|||+|+|+|+|+|
T Consensus 352 dC~ir~sl~FPav~SIr~RS~v~G~I~s~~~-~~~~~~~~f~~i~~~s~~~~~~~~~~~~l~~lkY~YTkvd~A~k~~~~ 430 (909)
T PF11145_consen 352 DCSIRMSLWFPAVWSIRQRSIVVGQIWSNSQ-GSSNDPLYFSRIVSPSELFNSFGNSSSNLSGLKYNYTKVDEAKKHCRR 430 (909)
T ss_pred CCCceEEEEecCeEEEeecceEEEEEecCCc-cccCCCcchhheeeeccccccccccccCccCceeeeeeHHHHHHHHHh
Confidence 9999999999999999999999999999999 446779999999999999877522 5679999999999999999
Q ss_pred cCCCChhhHhhhh-cCCCCCCcccccccchhhccccceeeEEeeecCCCCCCCCCCccceeeEEeecccccccccCCCcc
Q 044148 475 NEPFSFGTIVKKS-LLQFPRLEDADGLLSSLSLLSEDLTLHISAIPDPLPKARLPRTDIQMEIITLGPLFGHYWSSRNFS 553 (996)
Q Consensus 475 ~ep~s~~~~~Kks-~~~yP~~~~~~~~~~Sl~~l~~dl~~~~~a~p~~~~~~~~~~~~~~~evlsiG~l~~~~~~~~~~~ 553 (996)
++|+++ ||| +++||++.+ .++++++..||+++.++.|+ ++. +.+ |++||||+|+++++.....
T Consensus 431 ~~~~~~----kks~~~~yP~~~~----~~s~sDl~fdl~v~~s~~~~-~~~-g~a------~plslG~~~~~~~~~~~~~ 494 (909)
T PF11145_consen 431 NEPSKF----KKSLGLSYPDNLG----NYSSSDLRFDLSVRNSAGPD-LPS-GYA------SPLSLGSLFGRGDPLSADD 494 (909)
T ss_pred cCCccc----ccccCCCCCCccc----cccHhhhcccEEEecccccc-CCC-CCc------ceEEECchhcccCccccCc
Confidence 999874 555 599998755 34889999999999988887 545 444 5599999999877544333
Q ss_pred ccccccccccch--hhcccceeeEEEEEEEEeecccCceeeEEEeeEEeCCCCeEEEEecccccccccccccccCccCCC
Q 044148 554 TREVETHYHTKA--EYTEKQLLLNVSAQLSITEKSYSNFSVLFLEGLYDPHVGKMYLVGCRDVRASWKILFDSMDLEAGL 631 (996)
Q Consensus 554 ~~~~~~~~~~~~--~~~~~~~lLNVSy~i~~~~~~~~n~s~isaEGvYD~~tG~lcmVGCR~v~~~~~~~~~~~~~e~~~ 631 (996)
..+..++....+ ..+++++||||||+|+|+++.+.|.+.|+|||||||+||+|||||||+++++|+++++ |+++
T Consensus 495 ~~~~~~~~~~~~~~~~~~~~~llNVSy~i~~~~~~~~~~~~isaEGvYD~~~G~lclVGCR~v~~~~~~~~~----~~~~ 570 (909)
T PF11145_consen 495 SFSRHAASPSSPEVTEMQHSRLLNVSYEISLSGSISSNSSQISAEGVYDPKTGRLCLVGCRDVRLNWNISSN----ESSM 570 (909)
T ss_pred ccccccccccccccccccccceeEEEEEEEEcccccceEEEEEEEeeeeCCCCeEEEEeccccccCcccccc----CCCC
Confidence 332232222222 3333357999999999999999999999999999999999999999999999999754 8999
Q ss_pred CeeEEEEEEeCCCCCCcccCCceEEEEEecccCCCCCCccceeeeccchhhhhhhchhhhhhhhhhhhHHHHHHHHHHHH
Q 044148 632 DCLIEVVVSYPPTTSRWLVNPTAKIYIASQRNDDDPLHFKTIKFQTLPVMYRKQREDILSRRGVEGILRIVTLSFAIACI 711 (996)
Q Consensus 632 DC~I~V~vqfpp~~~~~~~~~~~kg~I~S~R~~~DpL~F~~l~l~s~~~~Y~~q~~~~i~R~d~E~il~m~~~s~tl~cv 711 (996)
||+|+|+|||||+|++ +++|+||+|+|+|+|+|||||++++|++++++|++|++++|||||||+|| +++|+||+|+
T Consensus 571 DC~I~V~vq~pp~~~~--~~~~~kg~I~S~R~~~DpL~F~~~~l~~~~~~~~~q~~~~i~R~d~E~i~--~~~s~tl~~~ 646 (909)
T PF11145_consen 571 DCEILVTVQFPPLDAK--VNPTIKGSISSTRDKSDPLYFEPLDLSTYPIYYRKQAEESIWRMDLEGIM--RVISLTLSCV 646 (909)
T ss_pred CeeEEEEEEcCCCCCC--CCCcEEEEEEeccCCCCCccccceeeeeccceeccccchhhhhhhHHHHH--HHHHHHHHHH
Confidence 9999999999999999 58999999999999999999999999999988888999999999999997 6677777777
Q ss_pred H--HHhhhcccCCCCCCchhhHHHHHHHhhcccccccchhhhccccccccccccceecccchh-----------------
Q 044148 712 L--SQLFYIKHNLDSNPFMSLVMLGVQALGYSLPLITGAEALFKRKDSEYQNTSYNLEKNQCS----------------- 772 (996)
Q Consensus 712 f--~QL~h~k~~p~~~P~iSlvML~vqaLGy~~pLvl~~EaLF~~~~~~~~~~~~~l~~~~~l----------------- 772 (996)
| +||+|+|||||++|+||||||+|||||||+|||+||||||+.+++. +.+.++.++|+
T Consensus 647 ~~~~QL~~~k~~~~~~P~iSlvML~v~aLGy~~pLv~n~EaLf~~~~~~---~~~~~~~~~w~e~~e~~vr~ltmvAflL 723 (909)
T PF11145_consen 647 FIGLQLFHVKKHPDVLPYISLVMLGVQALGYMIPLVLNFEALFKSSHNR---QNIFLDSGGWLEVNEVMVRLLTMVAFLL 723 (909)
T ss_pred HHHHHHhhhhcCCCccchHhHHHHHHHHHhccchhhcCHHHHcCcCCCC---ceEEeecCchhHHHHHHHHHHHHHHHHH
Confidence 6 9999999999999999999999999999999999999999966553 34568889984
Q ss_pred --HHHHHHHhhcccccCCCCCCCCccccCceEEEeehhHHHHHHHHHHhhhhccccc------c-hh---cccCcchhhH
Q 044148 773 --KLMQKVWKSRVRLLSRSPNEPHRVPSDKLVLLTTSAIHVTGYILVLIIHSAIRTE------K-FI---DSTSKSMWET 840 (996)
Q Consensus 773 --RLlqlvw~aR~~~~~~~~~~~~~~~~ek~vL~~~l~ly~~G~li~l~~h~~~~~~------~-~~---~~~~~~~W~~ 840 (996)
||||||||||+++.++++++++ ++||||||+|||+|++|+||+|++|..+++. . .. ...++.+|+
T Consensus 724 ~lRL~qlvw~aR~~~~~~~~~~~~--~sek~vl~~~l~ly~~G~li~l~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 800 (909)
T PF11145_consen 724 QLRLLQLVWSARIRDGARKPLEPW--PSEKKVLYICLPLYIAGGLIALIVHASKTNSRRARREESYDSRISHQQHSWWE- 800 (909)
T ss_pred HHHHHHHHHHhhccccccCCCCCC--CccceEEEEEeHHHHHHHHHhhhhhhhcccccccccccccccccccccccHHH-
Confidence 9999999999999999988765 9999999999999999999999999997631 1 11 122344776
Q ss_pred hHHHhhhhhhhccchhHhHHhhhccCCCCcCccceeeeeeeeeecccceecccCCCCCCCCC-CcccccCCCCCcccccc
Q 044148 841 ELEEYVGLVQDFFLLPQVIGNFLWQTDCKPLRKLYFIGITVVRLLPHVYDYTRSPVPNPYFS-DEYEFANPNLDFYSKFG 919 (996)
Q Consensus 841 ~L~sy~GLvlD~FLLPQIi~N~~~~s~~kpLs~~fYvG~T~vRLlpH~YD~~r~~~~~~~~~-~s~~ya~p~~dfys~aw 919 (996)
||++|+|||||||||||||+|+||++|||||+++||||+|++|||||+||++|+++++|+|+ ++|+||||++||||+||
T Consensus 801 ~l~~y~GLv~D~FLLPQii~N~~~~~~~~~Ls~~fY~G~T~~Rllph~Yd~~r~~~~~~~~~~~~~~ya~~~~dfys~aw 880 (909)
T PF11145_consen 801 DLKSYAGLVLDGFLLPQIIGNAFWQSKVKPLSKSFYVGTTLVRLLPHVYDLYRAPNYVPYFDDESYVYANPRMDFYSTAW 880 (909)
T ss_pred HHHHhhhHHHhhhhHHHHHHHHHhccCCcccccceeehHHHHHHHHHHHhhccccccCcccccccccccCcccccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999998 99999999999999999
Q ss_pred ceehhHHHHHHHHHHHHHHHhCccccc
Q 044148 920 DVAIPITAVFLAAAVYIQQKLGYEKLS 946 (996)
Q Consensus 920 di~Ip~~a~llA~~v~lQQr~g~~~~~ 946 (996)
||||||+|++||++||+||||||+|+.
T Consensus 881 Di~Ip~~a~llA~~v~~QQr~~~~~~~ 907 (909)
T PF11145_consen 881 DIVIPCGAVLLAALVYLQQRWGGRCIL 907 (909)
T ss_pred ceeeehHHHHHHHHHHHHhhhCCeeec
Confidence 999999999999999999999954443
No 2
>PF11145 DUF2921: Protein of unknown function (DUF2921); InterPro: IPR021319 This eukaryotic family of proteins has no known function.
Probab=99.96 E-value=1.7e-28 Score=297.76 Aligned_cols=271 Identities=20% Similarity=0.293 Sum_probs=181.9
Q ss_pred CceeEEEEEEEEEeeecCCCCceeEEEEeecCCCCCCCCCCCCcccccCCCCCCCCCCCcccCcEEEEEecCCccccccc
Q 044148 137 NHTQLTMTFQGIYTESKKNGGEIVLCLLGTAMLPSRESESNNPWEWMKGSGPSYYQPPLLQDDQILLVLHFPLTFTLTNM 216 (996)
Q Consensus 137 g~s~ltf~lEG~Yses~~~~ge~~LCMVG~~~lp~r~~ds~~pw~~~k~~~~~~~qp~~~~d~~i~L~LryP~~~sLt~r 216 (996)
|.+.+|++.||+|++++ ++||||||+++.+ .++ .++ +.++||+|++.||||.+|||++|
T Consensus 312 gl~~~tLvAEG~Wd~s~-----gqLCmvaCrv~~~--~~s-----~~~---------~~v~dC~ir~sl~FPav~SIr~R 370 (909)
T PF11145_consen 312 GLSNMTLVAEGVWDSSS-----GQLCMVACRVGNS--DDS-----LAN---------AGVGDCSIRMSLWFPAVWSIRQR 370 (909)
T ss_pred cccCceEEEEeeEcCCC-----CcEEEEeeeeccc--ccc-----ccc---------cccCCCCceEEEEecCeEEEeec
Confidence 55689999999999987 8899999998853 333 222 45789999999999999999999
Q ss_pred -eEEEEEEecCC--CCCCCCCceEEEeeecC----------CCCceeecccccccccCCCCCCcchhccCc-ccccccc-
Q 044148 217 -VIKGEMSSLNP--KSNPKYFDKVHILSQHG----------RSARYEFGTDKIVSKACNPYPVEDSFMKGG-IDIYKGI- 281 (996)
Q Consensus 217 -~V~G~LeS~n~--~~d~~YFd~VsIls~~g----------~~~~YeY~~~~~vsk~C~~~~~~d~~~~~g-~~~y~~~- 281 (996)
.|.|+|||++. .+++.||+.|.=.+.+. ...+|+||..++|.|-|....+.+. ++. ...|+++
T Consensus 371 S~v~G~I~s~~~~~~~~~~~f~~i~~~s~~~~~~~~~~~~l~~lkY~YTkvd~A~k~~~~~~~~~~--kks~~~~yP~~~ 448 (909)
T PF11145_consen 371 SIVVGQIWSNSQGSSNDPLYFSRIVSPSELFNSFGNSSSNLSGLKYNYTKVDEAKKHCRRNEPSKF--KKSLGLSYPDNL 448 (909)
T ss_pred ceEEEEEecCCccccCCCcchhheeeeccccccccccccCccCceeeeeeHHHHHHHHHhcCCccc--ccccCCCCCCcc
Confidence 99999999998 89999999997222110 1268999999999999998766543 221 2468876
Q ss_pred ---ccccc-ccccccCCceeEeecCCCCCCcCccccccccccCccccccCCCCCceEEEEeeeeeeccc--CCCCC-Cce
Q 044148 282 ---GFCEV-LQQVTNEGAFTVVPNWKCNGTDNFCSKMGPFGLNKEIQATDGSFKDVKIFMQNVKCEQTY--GKGNS-SSA 354 (996)
Q Consensus 282 ---~~C~i-l~~~~~~~~f~l~~~~~C~st~~~Cs~lgPF~~d~~~~~t~~~~p~~~m~~q~i~C~~~~--~~~~~-~a~ 354 (996)
+.-|+ +++.++.+...- -.|+ +.+ |+.+|+.+...+.....- ..-+...=...+ .+.+. .-+
T Consensus 449 ~~~s~sDl~fdl~v~~s~~~~-~~~g------~a~---plslG~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ll 517 (909)
T PF11145_consen 449 GNYSSSDLRFDLSVRNSAGPD-LPSG------YAS---PLSLGSLFGRGDPLSADD-SFSRHAASPSSPEVTEMQHSRLL 517 (909)
T ss_pred ccccHhhhcccEEEecccccc-CCCC------Ccc---eEEECchhcccCccccCc-cccccccccccccccccccccee
Confidence 66677 677665532210 1222 345 777776552100000000 000000000000 11111 123
Q ss_pred EEEeeeccccc-CCCcceEEEeeeeeCCCCeEEEEeeccc-c------cCCCCCcceeEEEEcccceeeeccceEEEEEE
Q 044148 355 KVAAYAATLRS-GISNMTLAAEGLWKSSSGQLCMVGCVGL-V------NAEGSSCNSQICMYIPTSFSIKQRSIIVGSFS 426 (996)
Q Consensus 355 rv~a~~a~~r~-g~~~~~l~AEGvwd~~tg~LCmVgCr~l-~------~s~~~DC~I~lsl~FPa~~Si~~Rs~i~G~I~ 426 (996)
.|++.+.+.-. ......|+|||+||+++|+|||||||.+ . +.++.||+|.|+++||+.- .+...+++|+|+
T Consensus 518 NVSy~i~~~~~~~~~~~~isaEGvYD~~~G~lclVGCR~v~~~~~~~~~~~~~DC~I~V~vq~pp~~-~~~~~~~kg~I~ 596 (909)
T PF11145_consen 518 NVSYEISLSGSISSNSSQISAEGVYDPKTGRLCLVGCRDVRLNWNISSNESSMDCEILVTVQFPPLD-AKVNPTIKGSIS 596 (909)
T ss_pred EEEEEEEEcccccceEEEEEEEeeeeCCCCeEEEEeccccccCccccccCCCCCeeEEEEEEcCCCC-CCCCCcEEEEEE
Confidence 44442222111 1368899999999999999999999986 1 1247999999999998766 568899999999
Q ss_pred ecCCCCC--cccceeeee
Q 044148 427 SINKSSL--SYFPLAFEK 442 (996)
Q Consensus 427 S~r~~sd--~f~pl~F~~ 442 (996)
|+|+++| +|+|+.++.
T Consensus 597 S~R~~~DpL~F~~~~l~~ 614 (909)
T PF11145_consen 597 STRDKSDPLYFEPLDLST 614 (909)
T ss_pred eccCCCCCccccceeeee
Confidence 9999999 555444444
No 3
>KOG0828 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=99.89 E-value=5.1e-24 Score=238.22 Aligned_cols=304 Identities=18% Similarity=0.225 Sum_probs=208.4
Q ss_pred ccCCCCeeEEEEEEeCCCCCCcc-------cCCceEEEEEecccCCCCCCccceeeeccchhhhhhhchhhhhhhhhhhh
Q 044148 627 LEAGLDCLIEVVVSYPPTTSRWL-------VNPTAKIYIASQRNDDDPLHFKTIKFQTLPVMYRKQREDILSRRGVEGIL 699 (996)
Q Consensus 627 ~e~~~DC~I~V~vqfpp~~~~~~-------~~~~~kg~I~S~R~~~DpL~F~~l~l~s~~~~Y~~q~~~~i~R~d~E~il 699 (996)
.+....|.|+...|...+++... +..+..|..++.--..+|.||-++.|+.+.+. .+++..|.+...+
T Consensus 227 ~eme~~~N~~t~~qi~~~~s~eN~~~~~~~n~~q~~pl~~vsgl~yspDC~v~l~l~ntkg~-----~~vl~n~aVr~tl 301 (636)
T KOG0828|consen 227 SEMEKHCNIETAAQISTLKSSENEFYNGDKNSYQKEPLMEVSGLVYSPDCFVPLTLNNTKGN-----VEVLYNKAVRYTL 301 (636)
T ss_pred HHHHHhhhhHHHHHHHHhhhhhccccCCCcchhcCCceecccCcccCCCcCcceeeeccccc-----hhhhhhhhHHHHH
Confidence 45578899999999988865432 12357788888888999999999999998764 3556666677665
Q ss_pred HHHHHHHHHHHHH---HHhhhcccCCCCCCchhhHHHHHHHh--hcccccccch----hhhccccccccccccceecccc
Q 044148 700 RIVTLSFAIACIL---SQLFYIKHNLDSNPFMSLVMLGVQAL--GYSLPLITGA----EALFKRKDSEYQNTSYNLEKNQ 770 (996)
Q Consensus 700 ~m~~~s~tl~cvf---~QL~h~k~~p~~~P~iSlvML~vqaL--Gy~~pLvl~~----EaLF~~~~~~~~~~~~~l~~~~ 770 (996)
+.+-..++.+| +|+.|-- |...-.+|++|+++||+ ||++-|.+.+ |.||..+.+ ++ |.+.+
T Consensus 302 --l~~~~~~~~~~~Ll~q~~~~s--ps~v~rlSf~~i~mqa~mD~~Lall~lta~~vve~lylpfvt----aA--F~~fV 371 (636)
T KOG0828|consen 302 --LYIFIVLSQIFLLLRQMRINS--PSHVQRLSFLTIAMQAGMDAYLALLFLTANAVVESLYLPFVT----AA--FFKFV 371 (636)
T ss_pred --HHHHHHHHHHHHHHHHHhhcC--chhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHH----HH--HHHHH
Confidence 33333444444 5554432 77677899999999999 6888777644 889988766 33 33333
Q ss_pred h-----hHHHHHHHh---------hcccccCCCCCCCCccccCceEEEeehhHHH-HHHHHHHhhhhcccccchhcccCc
Q 044148 771 C-----SKLMQKVWK---------SRVRLLSRSPNEPHRVPSDKLVLLTTSAIHV-TGYILVLIIHSAIRTEKFIDSTSK 835 (996)
Q Consensus 771 ~-----lRLlqlvw~---------aR~~~~~~~~~~~~~~~~ek~vL~~~l~ly~-~G~li~l~~h~~~~~~~~~~~~~~ 835 (996)
. ||+|..+|| |-|+... ..++.+.+.+-.-.+-+.-.-+ .|+++.+++-..- +...
T Consensus 372 ~~siFemRYLlsI~k~q~~~~~~~a~Rp~T~--~~~~n~~r~~~~~~e~s~~g~l~grf~fm~lv~~~~-------~l~s 442 (636)
T KOG0828|consen 372 VFSIFEMRYLLSIWKVQNSNMPPPATRPSTS--NSSNNNTRQSNASNENSPWGILLGRFLFMYLVVCIA-------SLYS 442 (636)
T ss_pred HHHHHHHHHHHHHHHhhcccCCCCCCCCCCC--CccccCcccccccccCCcchhhHHhHHHHHHHHHHH-------Hhhc
Confidence 3 599999999 5444332 2223333333333332222223 3444444443321 1122
Q ss_pred chhhHhHH---Hhhhhh-hhccchhHhHHhhhc-cCCCCcCccceeeeeeeeeecccceecccCCCCCCCCCCcccccCC
Q 044148 836 SMWETELE---EYVGLV-QDFFLLPQVIGNFLW-QTDCKPLRKLYFIGITVVRLLPHVYDYTRSPVPNPYFSDEYEFANP 910 (996)
Q Consensus 836 ~~W~~~L~---sy~GLv-lD~FLLPQIi~N~~~-~s~~kpLs~~fYvG~T~vRLlpH~YD~~r~~~~~~~~~~s~~ya~p 910 (996)
..|-+.+. .|+.+. ...||+|||+.|++. .|| +||++.|.+|+|++||+|++|-+.++.++ +-..|
T Consensus 443 ~~wp~q~r~yf~~iLif~~~SfWIPQIv~Nvvrg~SR-~Pl~w~yIlG~Tv~Rl~~plyVF~~s~n~--------~r~~p 513 (636)
T KOG0828|consen 443 AFWPVQFRNYFIPILIFMYYSFWIPQIVANVVRGDSR-KPLHWYYILGMTVTRLAIPLYVFGCSENF--------MRVEP 513 (636)
T ss_pred cccHHHHHHHHHHHHHHHHHhhhHHHHHHHHhcCCCC-CCcchhhhhhHhHHhhhcceEEEecchhh--------hccCC
Confidence 35665555 344444 559999999999999 566 99999999999999999999999998884 33456
Q ss_pred CCCccccccceehhHHHHHHHHHHHHHHHhCccccchhhhccceeeccCccceeeeccccchhh
Q 044148 911 NLDFYSKFGDVAIPITAVFLAAAVYIQQKLGYEKLSQILTFGHYKLLPSRSRTYERLPSKAIEA 974 (996)
Q Consensus 911 ~~dfys~awdi~Ip~~a~llA~~v~lQQr~g~~~~~~~~~~~~r~~~p~~~~~ye~~p~~~~e~ 974 (996)
. .+|.+-+.++++.|+.++++|..+|. ++|+ ||+++|.+.+||+++-.-..||
T Consensus 514 ~-----~~f~v~L~lwmlFQv~vLl~Qd~lGs---R~Fl---Pkk~lpe~YsY~r~l~~dh~~~ 566 (636)
T KOG0828|consen 514 K-----YFFAVGLVLWMLFQVLVLLVQDYLGS---RCFL---PKKFLPEKYSYHRRLQQDHLEA 566 (636)
T ss_pred c-----hhhHHHHHHHHHHHHHHHHHHhhccc---cccc---chhhCccccccccccccccccc
Confidence 3 88999999999999999999999992 1233 4444444558888887544443
No 4
>PF06191 DUF995: Protein of unknown function (DUF995); InterPro: IPR009337 This is a family of uncharacterised Proteobacteria proteins.
Probab=20.22 E-value=74 Score=32.89 Aligned_cols=26 Identities=23% Similarity=0.419 Sum_probs=20.7
Q ss_pred CcceEEEeeeeeCC-CCeEEEEeeccc
Q 044148 368 SNMTLAAEGLWKSS-SGQLCMVGCVGL 393 (996)
Q Consensus 368 ~~~~l~AEGvwd~~-tg~LCmVgCr~l 393 (996)
.+..=.|||.|.-+ .|+|||.+--.-
T Consensus 65 ~~~~s~g~GrW~Vt~~GklC~~a~W~~ 91 (145)
T PF06191_consen 65 KGSESYGEGRWFVTDNGKLCFRATWHS 91 (145)
T ss_pred CCcceeeeeEEEECCCCCEEEEeEEEC
Confidence 34567899999997 589999988653
No 5
>smart00679 CTNS Repeated motif present between transmembrane helices in cystinosin, yeast ERS1p, mannose-P-dolichol utilization defect 1, and other hypothetical proteins. Function unknown, but likely to be associated with the glycosylation machinery.
Probab=19.62 E-value=40 Score=25.20 Aligned_cols=23 Identities=35% Similarity=0.641 Sum_probs=17.2
Q ss_pred chhHhHHhhhccCCCCcCccceee
Q 044148 854 LLPQVIGNFLWQTDCKPLRKLYFI 877 (996)
Q Consensus 854 LLPQIi~N~~~~s~~kpLs~~fYv 877 (996)
.+|||+.|.-.+ +++-|+..|++
T Consensus 3 ~~PQi~~~~~~k-s~~glS~~~~~ 25 (32)
T smart00679 3 LLPQIIKNYRRK-STEGLSILFVL 25 (32)
T ss_pred chhHHHHHHHcC-CcCcCCHHHHH
Confidence 589999998555 44788877765
No 6
>PF14273 DUF4360: Domain of unknown function (DUF4360)
Probab=16.35 E-value=4.5e+02 Score=28.00 Aligned_cols=64 Identities=22% Similarity=0.343 Sum_probs=45.5
Q ss_pred EEEeeeccccCCCCCCCCCeeeeCCceeEEEEEEEEEeeecCCCCceeEEEEeecCCCCCCCCCCCCcccccCCCCCCCC
Q 044148 113 MGITLDESFAERPYGGNPQFQMWPNHTQLTMTFQGIYTESKKNGGEIVLCLLGTAMLPSRESESNNPWEWMKGSGPSYYQ 192 (996)
Q Consensus 113 l~isr~~~~~~~~y~~sp~f~~~pg~s~ltf~lEG~Yses~~~~ge~~LCMVG~~~lp~r~~ds~~pw~~~k~~~~~~~q 192 (996)
..|+-+++++... +-..++.|..+.++|.|..+.-+ +|-+.-+ . ++.|
T Consensus 8 ~~v~~~GsGCP~g---t~~~~vs~D~t~~tv~f~~f~a~------------~Gpg~~~---~------~~rk-------- 55 (184)
T PF14273_consen 8 TSVTYSGSGCPPG---TASVQVSPDNTAFTVTFDNFTAE------------IGPGIPA---T------DSRK-------- 55 (184)
T ss_pred EEEEEEcCCCCCC---cccEEECCCCCEEEEEEcCeEEE------------eCCCCCC---c------cCcc--------
Confidence 3457777887731 45568999999999999998887 2333322 1 1444
Q ss_pred CCCcccCcEEEEEecCCcccc
Q 044148 193 PPLLQDDQILLVLHFPLTFTL 213 (996)
Q Consensus 193 p~~~~d~~i~L~LryP~~~sL 213 (996)
+|++-|.|++|.-++.
T Consensus 56 -----nCql~l~v~~p~G~q~ 71 (184)
T PF14273_consen 56 -----NCQLNLQVQVPQGWQF 71 (184)
T ss_pred -----cceEEEEEecCCCeEE
Confidence 6999999999987765
No 7
>PF05095 DUF687: Protein of unknown function (DUF687); InterPro: IPR007787 This family contains uncharacterised Chlamydia proteins.
Probab=16.05 E-value=89 Score=38.34 Aligned_cols=131 Identities=24% Similarity=0.265 Sum_probs=75.7
Q ss_pred ccCcee-eEEEeeEEeC------CCCeEEEEecccccccccccccccCccCCCCeeEEEEEEeCCCCCCcccCCceEEEE
Q 044148 586 SYSNFS-VLFLEGLYDP------HVGKMYLVGCRDVRASWKILFDSMDLEAGLDCLIEVVVSYPPTTSRWLVNPTAKIYI 658 (996)
Q Consensus 586 ~~~n~s-~isaEGvYD~------~tG~lcmVGCR~v~~~~~~~~~~~~~e~~~DC~I~V~vqfpp~~~~~~~~~~~kg~I 658 (996)
+|+..+ .|+.=+++|| ..|.||+.||++...-.. ....|.+....=+|.|.|+-
T Consensus 186 pYSsgseGif~ps~~dpsf~~Alr~~f~~lagi~~~s~~~~--~~~~d~~~~~~~~~~v~v~~----------------- 246 (541)
T PF05095_consen 186 PYSSGSEGIFWPSVRDPSFNWALRYGFMCLAGISELSQLGE--PNPQDQERLGSNEQAVVVNR----------------- 246 (541)
T ss_pred ccCCCCcceecccccCHHHHHHHHhhhhhhhhhcccccccC--CCcccccccccceeEEEEec-----------------
Confidence 344433 4777778887 589999999999753111 11112222222334444332
Q ss_pred EecccCCCCCCcccee-----------eeccchhhhhhhchhhhhhhhhhhhHHHHHHHHHHHHHHHhhhcccCCCC-CC
Q 044148 659 ASQRNDDDPLHFKTIK-----------FQTLPVMYRKQREDILSRRGVEGILRIVTLSFAIACILSQLFYIKHNLDS-NP 726 (996)
Q Consensus 659 ~S~R~~~DpL~F~~l~-----------l~s~~~~Y~~q~~~~i~R~d~E~il~m~~~s~tl~cvf~QL~h~k~~p~~-~P 726 (996)
..||--|..+. ...+ ++.....+++ +|+++.+..||++++-.+ +.=+.-++|. +-
T Consensus 247 -----~~~p~~ftRl~~ll~~~dt~~~~e~N--p~P~~~~dil----l~~~~~i~ris~~~q~~~--i~pv~~~~d~~v~ 313 (541)
T PF05095_consen 247 -----SSDPGAFTRLQELLNQGDTSSEAEEN--PFPSSCRDIL----LSSIFNIHRISDLVQIYW--ISPVSYEPDDMVL 313 (541)
T ss_pred -----CCCccHHHHHHHHhcCCCchhhhhcC--CCCccchHHH----HHHHHHHHHHHHhhhheE--EEecccCCCceEE
Confidence 23444444432 2222 2445566666 899988888888887765 2224445544 33
Q ss_pred chhhHHHHHHHhhcccccccch
Q 044148 727 FMSLVMLGVQALGYSLPLITGA 748 (996)
Q Consensus 727 ~iSlvML~vqaLGy~~pLvl~~ 748 (996)
+|++++-++-+|-|..-|++|-
T Consensus 314 ~i~i~~y~~~~l~~~fLl~Tn~ 335 (541)
T PF05095_consen 314 AIFIVGYGIGGLSYFFLLLTNR 335 (541)
T ss_pred EEeehhhhhhhhhheeEEecCC
Confidence 5888888888777777666654
No 8
>PF08693 SKG6: Transmembrane alpha-helix domain; InterPro: IPR014805 SKG6 and AXL2 are membrane proteins that show polarised intracellular localisation [, ]. This entry represents the highly conserved transmembrane alpha-helical domain found in these proteins [, ]. The full-length AXL2 protein has a negative regulatory function in cytokinesis [].
Probab=15.01 E-value=1.3e+02 Score=24.97 Aligned_cols=18 Identities=11% Similarity=0.508 Sum_probs=14.2
Q ss_pred cceehhHHHHHHHHHHHH
Q 044148 919 GDVAIPITAVFLAAAVYI 936 (996)
Q Consensus 919 wdi~Ip~~a~llA~~v~l 936 (996)
--|+||++.++++++++|
T Consensus 15 ~~VvVPV~vI~~vl~~~l 32 (40)
T PF08693_consen 15 VGVVVPVGVIIIVLGAFL 32 (40)
T ss_pred EEEEechHHHHHHHHHHh
Confidence 348999998888877766
No 9
>KOG2257 consensus N-acetylglucosaminyltransferase complex, subunit PIG-P, required for phosphatidylinositol biosynthesis [Function unknown]
Probab=9.98 E-value=1.3e+02 Score=30.80 Aligned_cols=26 Identities=23% Similarity=0.169 Sum_probs=21.7
Q ss_pred ccccceehhHHHHHHHHHHHHHHHhC
Q 044148 916 SKFGDVAIPITAVFLAAAVYIQQKLG 941 (996)
Q Consensus 916 s~awdi~Ip~~a~llA~~v~lQQr~g 941 (996)
||.|-++||......+.+.|+||--+
T Consensus 46 sk~WalAip~~l~v~~l~~~v~ll~~ 71 (135)
T KOG2257|consen 46 SKYWALAIPTYLLVAVLLAYVFLLGY 71 (135)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 79999999999888888888877544
No 10
>KOG4581 consensus Predicted membrane protein [Function unknown]
Probab=8.90 E-value=74 Score=35.22 Aligned_cols=23 Identities=30% Similarity=0.715 Sum_probs=20.1
Q ss_pred HHHhhcccccccchhhhcccccc
Q 044148 735 VQALGYSLPLITGAEALFKRKDS 757 (996)
Q Consensus 735 vqaLGy~~pLvl~~EaLF~~~~~ 757 (996)
+-.+||-|||.+|.||...++++
T Consensus 229 ~~~l~yaiplalnteailhsnnt 251 (359)
T KOG4581|consen 229 IFPLGYAIPLALNTEAILHSNNT 251 (359)
T ss_pred EEeehheeeeccchHHHhccCCC
Confidence 44689999999999999988876
Done!