Query Summary

Your job contains 1 sequence.

Parameters

Threshold: 0.001

Maximum number of alignments shown: 100

BLAST filter: on

Query Sequence

>044152
TLDVMFSMEAFIISIGRSLDSIVDLTWIICFGVSFGAFSLLAIFISPTSFMYWVNHFQFS
NFFYVLVLISEDFDIAFTNKFYHSHLDDMANINSSAAVAAASLIARSLYILASDNNDMHS
SVLGAINVNTSLVEELMGCLLSCEPDLHYVGVVVGEPSFKPYLGYVDDVSRFVWNFLADR
TSTPKENASSSCSKDCTNEDEHFLPSLNVANHRYVLAYSTRLMFESGTWNVLPPNSSDSM
GSVDPVSTESNWNTIGLWVYTIQNGAYDHLILIGGIAVTISAYFMIALARSFITKALKRD

High Scoring Gene Products

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  044152
        (300 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2083223 - symbol:AT3G52640 species:3702 "Arabi...   459  2.0e-50   2


>TAIR|locus:2083223 [details] [associations]
            symbol:AT3G52640 species:3702 "Arabidopsis thaliana"
            [GO:0005576 "extracellular region" evidence=ISM] [GO:0009507
            "chloroplast" evidence=ISM] [GO:0016021 "integral to membrane"
            evidence=IEA] [GO:0016485 "protein processing" evidence=IEA]
            [GO:0005773 "vacuole" evidence=IDA] [GO:0005774 "vacuolar membrane"
            evidence=IDA] [GO:0005783 "endoplasmic reticulum" evidence=IDA]
            InterPro:IPR008710 Pfam:PF05450 GO:GO:0005783 GO:GO:0016021
            GO:GO:0005774 EMBL:CP002686 GO:GO:0016485 KO:K06171
            PANTHER:PTHR21092 OMA:CVVSTTR IPI:IPI00532750 RefSeq:NP_974419.1
            UniGene:At.43576 ProteinModelPortal:F4J819 PRIDE:F4J819
            EnsemblPlants:AT3G52640.2 GeneID:824430 KEGG:ath:AT3G52640
            PhylomeDB:F4J819 Uniprot:F4J819
        Length = 705

 Score = 459 (166.6 bits), Expect = 2.0e-50, Sum P(2) = 2.0e-50
 Identities = 95/181 (52%), Positives = 125/181 (69%)

Query:   128 VNTSLVEELMGCLLSCEPDLHYVGVVVGEPSFKPYLGYVDDVSRFVWNFLADRTSTPKEN 187
             ++ +LV++ +    +C P  +Y GV++GEPS KPYLGYV DVSRF+WNFLAD+TS  K N
Sbjct:   527 LSCNLVKDYISPTNTC-PG-NYAGVILGEPSSKPYLGYVGDVSRFLWNFLADKTSVQKGN 584

Query:   188 ASSSCSKD-CTNEDEHFLPSLN-------VANHRYVLAYSTRLMFESGTWNVLPPNSSDS 239
              +S CSK  C+  DE  + + +       V+  RYV AYSTRL +  G W +LP NSSDS
Sbjct:   585 TTSVCSKGVCSKTDEVCIKAESNKEGTCVVSTTRYVPAYSTRLKYNDGAWTILPQNSSDS 644

Query:   240 MGSVDPVSTESNWNTIGLWVYTIQNGAYDHLILIGGIAVTISAYFMIALARSFITKALKR 299
             MG VDPV TESNW+T+ + VYT+Q+ AYD+ +L+ GI VT  AY  I  A+S ITKALK+
Sbjct:   645 MGMVDPVWTESNWDTLRVHVYTVQHSAYDNAVLVAGITVTTLAYIGILAAKSIITKALKQ 704

Query:   300 D 300
             D
Sbjct:   705 D 705

 Score = 134 (52.2 bits), Expect = 6.6e-11, Sum P(2) = 6.6e-11
 Identities = 26/39 (66%), Positives = 31/39 (79%)

Query:   109 YILASDNNDMHSSVLGAINVNTSLVEELMGCLLSCEPDL 147
             YILASDN D  +S LG+I+VN S VEEL+ CLL+CEP L
Sbjct:   489 YILASDNKDTSNSALGSIHVNASFVEELLTCLLACEPGL 527

 Score = 90 (36.7 bits), Expect = 2.0e-50, Sum P(2) = 2.0e-50
 Identities = 15/22 (68%), Positives = 18/22 (81%)

Query:    68 LISEDFDIAFTNKFYHSHLDDM 89
             ++ EDFD  F NKFYHSHLDD+
Sbjct:   419 VVLEDFDTNFVNKFYHSHLDDL 440


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.323   0.137   0.423    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      300       281   0.00083  115 3  11 22  0.44    33
                                                     33  0.42    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  614 (65 KB)
  Total size of DFA:  228 KB (2125 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  22.21u 0.15s 22.36t   Elapsed:  00:00:01
  Total cpu time:  22.21u 0.15s 22.36t   Elapsed:  00:00:01
  Start:  Sat May 11 10:17:00 2013   End:  Sat May 11 10:17:01 2013

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