BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 044153
(262 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|B7FA90|HPT1_ORYSJ Probable homogentisate phytyltransferase 1, chloroplastic OS=Oryza
sativa subsp. japonica GN=HPT1 PE=2 SV=1
Length = 404
Score = 209 bits (532), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 109/270 (40%), Positives = 171/270 (63%), Gaps = 12/270 (4%)
Query: 3 TIDMTSVSLLAPQQFADLTPTFFIGLLKAIVPGLLVNIYEVGVNQLYDVEIDKINKPDLP 62
+ + SVSLLA + +D++P F GLL+A+V L +NIY VG+NQL+D+EIDK+NKP LP
Sbjct: 124 ALSIVSVSLLAVENLSDVSPLFLTGLLEAVVAALFMNIYIVGLNQLFDIEIDKVNKPTLP 183
Query: 63 LASGDLSIGAGITITCTCLLMSLAIGIMLRSPPLISTIIMWFVLSSAYSVDLPFLRWKRN 122
LASG+ S G+ + MS +G + S PL + + F+L +AYS++LPFLRWKR+
Sbjct: 184 LASGEYSPATGVALVSAFAAMSFGLGWAVGSQPLFLALFISFILGTAYSINLPFLRWKRS 243
Query: 123 PFLATMYGVLERGLAMPLGYFMHIQAQVRAWKTYRVFKNIDVCSGCQVL----------D 172
+A + + R + + L +F+HIQ V ++ VF + + + D
Sbjct: 244 AVVAALCILAVRAVIVQLAFFLHIQTFV--FRRPAVFTRPLIFATAFMTFFSVVIALFKD 301
Query: 173 MPDVDGDKEHGIQTLSIALGKEKVLWLGVYMLLVVYGALVIAGASSPFLESKLITIIGHS 232
+PD++GD+ GI++ S+ LG++KV W+ V +L + Y ++ GA+S L SK T++GH+
Sbjct: 302 IPDIEGDRIFGIKSFSVRLGQKKVFWICVGLLEMAYCVAILMGATSACLWSKYATVVGHA 361
Query: 233 TLAFLLLQRARNVDVSSQAAILSFYRFIWK 262
LA +L R+R++D++S+ AI SFY FIWK
Sbjct: 362 ILAAILWNRSRSIDLTSKTAITSFYMFIWK 391
>sp|Q8VWJ1|HPT1_ARATH Homogentisate phytyltransferase 1, chloroplastic OS=Arabidopsis
thaliana GN=VTE2-1 PE=2 SV=1
Length = 393
Score = 208 bits (530), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 109/267 (40%), Positives = 168/267 (62%), Gaps = 8/267 (2%)
Query: 4 IDMTSVSLLAPQQFADLTPTFFIGLLKAIVPGLLVNIYEVGVNQLYDVEIDKINKPDLPL 63
+ + SVS LA ++ +D++P F G+L+A+V L++NIY VG+NQL DVEIDK+NKP LPL
Sbjct: 114 LSILSVSFLAVEKVSDISPLLFTGILEAVVAALMMNIYIVGLNQLSDVEIDKVNKPYLPL 173
Query: 64 ASGDLSIGAGITITCTCLLMSLAIGIMLRSPPLISTIIMWFVLSSAYSVDLPFLRWKRNP 123
ASG+ S+ GI I + +MS +G ++ S PL + + F+L +AYS++LP LRWKR
Sbjct: 174 ASGEYSVNTGIAIVASFSIMSFWLGWIVGSWPLFWALFVSFMLGTAYSINLPLLRWKRFA 233
Query: 124 FLATMYGVLERGLAMPLGYFMHIQAQV--------RAWKTYRVFKNIDVCSGCQVLDMPD 175
+A M + R + + + +++HIQ V R F + D+PD
Sbjct: 234 LVAAMCILAVRAIIVQIAFYLHIQTHVFGRPILFTRPLIFATAFMSFFSVVIALFKDIPD 293
Query: 176 VDGDKEHGIQTLSIALGKEKVLWLGVYMLLVVYGALVIAGASSPFLESKLITIIGHSTLA 235
++GDK GI++ S+ LG+++V W V +L + Y ++ GA+SPF+ SK+I+++GH LA
Sbjct: 294 IEGDKIFGIRSFSVTLGQKRVFWTCVTLLQMAYAVAILVGATSPFIWSKVISVVGHVILA 353
Query: 236 FLLLQRARNVDVSSQAAILSFYRFIWK 262
L RA++VD+SS+ I S Y FIWK
Sbjct: 354 TTLWARAKSVDLSSKTEITSCYMFIWK 380
>sp|B1B3P3|N8DT1_SOPFL Naringenin 8-dimethylallyltransferase 1, chloroplastic OS=Sophora
flavescens GN=N8DT-1 PE=1 SV=1
Length = 410
Score = 203 bits (517), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 108/263 (41%), Positives = 171/263 (65%), Gaps = 12/263 (4%)
Query: 10 SLLAPQQFADLTPTFFIGLLKAIVPGLLVNIYEVGVNQLYDVEIDKINKPDLPLASGDLS 69
SL+A ++ +DL+ FFIG L+ +V + ++I+ VG+NQL D+EIDKINKPDLPLASG LS
Sbjct: 137 SLVAVEKLSDLSLAFFIGWLQVVVAVICIHIFGVGLNQLCDIEIDKINKPDLPLASGKLS 196
Query: 70 IGAGITITCTCLLMSLAIGIMLRSPPLISTIIMWFVLSSAYSVDLPFLRWKRNPFLATMY 129
+ IT + L++ L ++ S PL T+ + +++SAY+VDLP LRWK+ P L +
Sbjct: 197 FRNVVIITASSLILGLGFAWIVDSWPLFWTVFISCMVASAYNVDLPLLRWKKYPVLTAIN 256
Query: 130 GVLERGLAMPLGYFMHIQAQVRAWKTYRVF-KNIDVCSGCQVL---------DMPDVDGD 179
+ + + LG+F+H+Q V +K F + + C+ + D+PD++GD
Sbjct: 257 FIADVAVTRSLGFFLHMQTCV--FKRPTTFPRPLIFCTAIVSIYAIVIALFKDIPDMEGD 314
Query: 180 KEHGIQTLSIALGKEKVLWLGVYMLLVVYGALVIAGASSPFLESKLITIIGHSTLAFLLL 239
++ GIQ+LS+ LG ++V W+ V +L + YG ++ GA+SP L SK+IT++GH+ LA +L
Sbjct: 315 EKFGIQSLSLRLGPKRVFWICVSLLEMTYGVTILVGATSPILWSKIITVLGHAVLASVLW 374
Query: 240 QRARNVDVSSQAAILSFYRFIWK 262
A++VD++S + SFY FIWK
Sbjct: 375 YHAKSVDLTSNVVLHSFYMFIWK 397
>sp|B9A1Q4|G4DT_SOYBN Glycinol 4-dimethylallyltransferase OS=Glycine max GN=G4DT PE=1
SV=1
Length = 409
Score = 200 bits (509), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 106/268 (39%), Positives = 161/268 (60%), Gaps = 8/268 (2%)
Query: 3 TIDMTSVSLLAPQQFADLTPTFFIGLLKAIVPGLLVNIYEVGVNQLYDVEIDKINKPDLP 62
T+ S SLLA ++ +D++ +F IG+L+ ++P L + IY GVNQLYD+EIDKINKP LP
Sbjct: 129 TLCAFSSSLLAVEKLSDISLSFLIGVLQGVLPQLFIEIYLCGVNQLYDLEIDKINKPHLP 188
Query: 63 LASGDLSIGAGITITCTCLLMSLAIGIMLRSPPLISTIIMWFVLSSAYSVDLPFLRWKRN 122
+ASG S G+ I+ L +S + S PLI +++ +AYS+D+P LRWKR
Sbjct: 189 MASGQFSFKTGVIISAAFLALSFGFTWITGSWPLICNLVVIASSWTAYSIDVPLLRWKRY 248
Query: 123 PFLATMYGVLERGLAMPLGYFMHIQAQV--------RAWKTYRVFKNIDVCSGCQVLDMP 174
PF+A M + LA+P+ YF H+Q V R+ F D+P
Sbjct: 249 PFVAAMCMISTWALALPISYFHHMQTVVLKRPIGFPRSLGFLVAFMTFYSLGLALSKDIP 308
Query: 175 DVDGDKEHGIQTLSIALGKEKVLWLGVYMLLVVYGALVIAGASSPFLESKLITIIGHSTL 234
DV+GDKEHGI + ++ LG+++ W+ V + +G ++AGAS +K+ T +G++ L
Sbjct: 309 DVEGDKEHGIDSFAVRLGQKRAFWICVSFFEMAFGVGILAGASCSHFWTKIFTGMGNAVL 368
Query: 235 AFLLLQRARNVDVSSQAAILSFYRFIWK 262
A +L +A++VD+S +A+ SFY FIWK
Sbjct: 369 ASILWYQAKSVDLSDKASTGSFYMFIWK 396
>sp|Q0D576|HPT2_ORYSJ Probable homogentisate phytyltransferase 2, chloroplastic OS=Oryza
sativa subsp. japonica GN=HPT2 PE=3 SV=2
Length = 379
Score = 94.4 bits (233), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 113/233 (48%), Gaps = 11/233 (4%)
Query: 39 NIYEVGVNQLYDVEIDKINKPDLPLASGDLSIGAGITITCTCLLMSLAIGIMLRSPPLIS 98
N Y VG+NQ+YD+ IDK+NKP LP+A+GDLS+ + +I + P + S
Sbjct: 137 NGYIVGINQIYDIRIDKVNKPYLPIAAGDLSVQTAWLLVVLFAAAGFSIVVTNFGPFITS 196
Query: 99 TIIMWFVLSSAYSVDLPFLRWKRNPFLATMYGVLERGLAMPLGYFMHIQAQVR---AWKT 155
+ L + YSV P R KR P A + RG + G + +A + W +
Sbjct: 197 LYCLGLFLGTIYSV--PPFRLKRYPVAAFLIIATVRGFLLNFGVYYATRAALGLTFQWSS 254
Query: 156 YRVFKNIDVCSGCQVL----DMPDVDGDKEHGIQTLSIALGKEKVLWLGVYMLLVVYGAL 211
F V V+ D+PDV+GD+++ I TL+ LG + +LG +L+ Y A
Sbjct: 255 PVAFITCFVTLFALVIAITKDLPDVEGDRKYQISTLATKLGVRNIAFLGSGLLIANYVAA 314
Query: 212 VIAGASSPFLESKLITIIGHSTLAFLLLQRARNVDVS--SQAAILSFYRFIWK 262
+ P + + + H+ LA ++ + ++ + ++ AI +YRFIW
Sbjct: 315 IAVAFLMPQAFRRTVMVPVHAALAVGIIFQTWVLEQAKYTKDAISQYYRFIWN 367
>sp|Q1ACB3|HPT2_ARATH Homogentisate phytyltransferase 2, chloroplastic OS=Arabidopsis
thaliana GN=HPT2 PE=2 SV=1
Length = 386
Score = 90.5 bits (223), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/233 (31%), Positives = 113/233 (48%), Gaps = 11/233 (4%)
Query: 39 NIYEVGVNQLYDVEIDKINKPDLPLASGDLSIGAGITITCTCLLMSLAIGIMLRSPPLIS 98
N Y VG+NQ+YD+ IDK+NKP LP+A+GDLS+ + + + L + P + S
Sbjct: 144 NGYIVGINQIYDIGIDKVNKPYLPIAAGDLSVQSAWLLVIFFAIAGLLVVGFNFGPFITS 203
Query: 99 TIIMWFVLSSAYSVDLPFLRWKRNPFLATMYGVLERGLAMPLGYFMHIQAQVR---AWKT 155
+ L + YSV P LR KR P A + RG + G + +A + W
Sbjct: 204 LYSLGLFLGTIYSV--PPLRMKRFPVAAFLIIATVRGFLLNFGVYHATRAALGLPFQWSA 261
Query: 156 YRVFKNIDVCSGCQVL----DMPDVDGDKEHGIQTLSIALGKEKVLWLGVYMLLVVYGAL 211
F V V+ D+PDV+GD++ I TL+ LG + +LG +LLV Y +
Sbjct: 262 PVAFITSFVTLFALVIAITKDLPDVEGDRKFQISTLATKLGVRNIAFLGSGLLLVNYVSA 321
Query: 212 VIAGASSPFLESKLITIIGHSTLAFLLLQRARNVDVS--SQAAILSFYRFIWK 262
+ P + + I H LA L+ + ++ + ++ AI +YRFIW
Sbjct: 322 ISLAFYMPQVFRGSLMIPAHVILASGLIFQTWVLEKANYTKEAISGYYRFIWN 374
>sp|Q4J8K2|DGGGP_SULAC Digeranylgeranylglyceryl phosphate synthase OS=Sulfolobus
acidocaldarius (strain ATCC 33909 / DSM 639 / JCM 8929 /
NBRC 15157 / NCIMB 11770) GN=Saci_1565 PE=3 SV=1
Length = 275
Score = 62.0 bits (149), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 109/234 (46%), Gaps = 41/234 (17%)
Query: 19 DLTPTFFIGLLKAIVPGLLVNIYEVG---VNQLYDVEIDKINKPDLPLASGDLSIGAG-- 73
TP FF+ P L+V++ G +N +YD+E+DKINKP+ PL SG +++
Sbjct: 33 KFTPLFFL-------PLLVVSLIAAGGYVINDVYDIEVDKINKPERPLPSGRIAVNIARR 85
Query: 74 --ITITCTCLLMSLAIGIMLRSPPLISTIIMWFVLSSAYSVDLPFLRWKRN------PFL 125
I + L++S+ +G++ LI+ ++++ Y+ L L N L
Sbjct: 86 FSIVLFAVGLIISIPLGLIPFGFALITIVLLY-----EYARSLKKLGLVGNFIVALTSAL 140
Query: 126 ATMYGVLERGLAMPLGYFMHIQAQVRAWKTYRVFKNIDVCSGCQVLDMPDVDGDKEHGIQ 185
+ YG L G LG F+ + + R F V + D++GDK +G+
Sbjct: 141 SAYYGGLASG--SLLGNFIIPTIYIFFFTLSREF----------VKGIEDIEGDKRNGVN 188
Query: 186 TLSIALGKEKVLWLGVYMLLVVYGALVIAGASSPFLESKLITIIGHSTLAFLLL 239
TL++ LG EK W+ + ++ G L+ FL +I +IG L LL+
Sbjct: 189 TLAVKLG-EKSTWI---IAKIILGILIFTSPLPYFLGFNVIYLIGILALDVLLV 238
>sp|Q12VF3|DGGGP_METBU Digeranylgeranylglyceryl phosphate synthase OS=Methanococcoides
burtonii (strain DSM 6242) GN=Mbur_1679 PE=3 SV=1
Length = 281
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 82/182 (45%), Gaps = 11/182 (6%)
Query: 44 GVNQLYDVEIDKINKPDLPLASGDLSIGAGITITCTCLLMSLAIGIMLRSPPLISTIIMW 103
G+N +D+EIDK+NKP P+ SG +S+ + + + + + + ++ PL I ++
Sbjct: 61 GLNDYFDIEIDKVNKPSRPIPSGKISLKSALYFSLFLFITGITLAFLVN--PLCGIIALF 118
Query: 104 FVLSSAYSVDLPFLRWKRNPFLATMYGVLERGLAMPLGYFMHIQAQVRAWKTYRVFKNID 163
++ + L KR PF G G + A ++A + +
Sbjct: 119 ----NSMVLILYAQSLKRTPFFGNASVGYLTGSTFLFGGAVFGMAGLQALVVLFLLATLA 174
Query: 164 VCSGCQVLDMPDVDGDKEHGIQTLSIALGKEKVLWLGVYMLLVVYGALVIAGASSPFLES 223
+ V D+ D+ GDK+ G +TL I +G +K ++ +G + + P+L+S
Sbjct: 175 TIAREIVKDVEDIVGDKKDGARTLPILIGAKKASYIA-----AAFGFTAMLASPVPYLQS 229
Query: 224 KL 225
L
Sbjct: 230 IL 231
>sp|Q2NGM1|DGGGP_METST Digeranylgeranylglyceryl phosphate synthase OS=Methanosphaera
stadtmanae (strain DSM 3091) GN=Msp_0634 PE=3 SV=1
Length = 272
Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 71/157 (45%), Gaps = 8/157 (5%)
Query: 45 VNQLYDVEIDKINKPDLPLASGDLSIGAGITITCTCLLMSLAIGIMLRSPPLISTIIMWF 104
+N YD EID+IN P+ P+ SG + + + + L+S+ +G ++ I +I+
Sbjct: 51 INDYYDYEIDRINAPNRPIPSGKIELKRALYYSLILFLVSIILGFIISLENGI-VVILCT 109
Query: 105 VLSSAYSVDLPFLRWKRNPFLATMYGVLERGLAMPLGYFMHIQAQVRAWKTYRVFKNIDV 164
+L Y+ DL K+ F+ + + GL G I V F +
Sbjct: 110 ILMIIYAYDL-----KQRCFIGNLCVAILTGLTFVFGGL--ITKDVNLGFILGFFAFLMT 162
Query: 165 CSGCQVLDMPDVDGDKEHGIQTLSIALGKEKVLWLGV 201
S + D+ D++GDK+ TL I G +K + L V
Sbjct: 163 LSREIIKDIEDIEGDKKEDAHTLPIIYGTKKAVMLAV 199
>sp|A3CW74|DGGGP_METMJ Digeranylgeranylglyceryl phosphate synthase OS=Methanoculleus
marisnigri (strain ATCC 35101 / DSM 1498 / JR1)
GN=Memar_1697 PE=3 SV=1
Length = 279
Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 79/177 (44%), Gaps = 13/177 (7%)
Query: 45 VNQLYDVEIDKINKPDLPLASGDLSIGAGITITCTCLLMSLAIGIMLRSPPLISTIIMWF 104
+N + DVEID+IN+PD P+ +GD+S+ + +AI + + L II
Sbjct: 54 INDVRDVEIDRINRPDRPIPAGDISLAGARAYAAALFVGGIAIATLTTTLCLAIAIINSV 113
Query: 105 VLSSAYSVDLPFLRWKRNPFLATM-YGVLERGLAMPLGYFMHIQAQVRAWKTYRVFKNID 163
+L Y+V R KR P L + L + + G F I+ VR + +
Sbjct: 114 IL-IVYAV-----RLKRTPVLGNVAVAYLAGSVFLFGGAFAGIEGLVRNL-SLAAITFLA 166
Query: 164 VCSGCQVLDMPDVDGDKEHGIQTLSIALGKEKVLWLGVYMLLVVYGALVIAGASSPF 220
+ + D DVDGD G +TL + +G K G++ GA +A + PF
Sbjct: 167 TIARELLKDAEDVDGDAAGGARTLPMIVGVRKT---GIFAFACACGA--VAASLLPF 218
>sp|Q971A3|DGGGP_SULTO Digeranylgeranylglyceryl phosphate synthase OS=Sulfolobus tokodaii
(strain DSM 16993 / JCM 10545 / NBRC 100140 / 7)
GN=STK_14510 PE=3 SV=1
Length = 278
Score = 52.4 bits (124), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 88/186 (47%), Gaps = 17/186 (9%)
Query: 29 LKAIVPGLLVNIYEVG---VNQLYDVEIDKINKPDLPLASGDLSIGAGITITCTCLLMSL 85
+K I+ ++V++ G +N ++D+EIDKINKP+ PL SG + I +++ L+ +
Sbjct: 37 IKLILAMIVVSVIAAGGYIINDVFDIEIDKINKPNRPLPSGRIKISRARSLSIVLFLVGI 96
Query: 86 AIGIMLRSPPLISTIIMWFVLSSAYSVDLPFLRWKRNPFLATMYGVLERGLAMPLGYFMH 145
+ ++L I ++ L Y+ DL K+ + + L L+ G
Sbjct: 97 VLSVLLNIYAFIIALLTVLALYY-YAKDL-----KKQGLVGNLIVALTSALSAFYGGLAF 150
Query: 146 IQAQVRAWKTYRVFKNIDV----CSGCQVLDMPDVDGDKEHGIQTLSIALGKEKVLWLGV 201
+ +W + + + + V + DV GD +G++TL++ +G EK W
Sbjct: 151 FEG---SWVIRTLIPTLYIFFFTLTREFVKGIEDVKGDMTNGVKTLAVRVGIEKT-WFIS 206
Query: 202 YMLLVV 207
++LV+
Sbjct: 207 KIILVI 212
>sp|B6YW76|DGGGP_THEON Digeranylgeranylglyceryl phosphate synthase OS=Thermococcus
onnurineus (strain NA1) GN=TON_1950 PE=3 SV=1
Length = 276
Score = 51.6 bits (122), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 76/175 (43%), Gaps = 11/175 (6%)
Query: 45 VNQLYDVEIDKINKPDLPLASGDLSIGAGITITCTCLLMSLAIGIMLRSPPLISTIIMWF 104
+N +D EIDKIN+P+ PL G + + + + LA+ M+ I F
Sbjct: 56 INDYFDYEIDKINRPERPLPRGAMGRKVALYYSMLLFAVGLALAYMIN--------IYAF 107
Query: 105 VLSSAYSVDLPFLRWKRNPFLATMYGVLERGLAMPLGYFMHIQAQVRAWKTYRVFKNIDV 164
+L V + WK P L + ++ GL + + + Y V
Sbjct: 108 ILGVIAYVTMFIYAWKLKP-LPFVGNIVVAGLTGATPLYGAVAVEHLGLAGYLAICAFLV 166
Query: 165 CSGCQVL-DMPDVDGDKEHGIQTLSIALGKEKVLWLGV-YMLLVVYGALVIAGAS 217
+V+ D+ DV+GD G +TL I GK++ ++GV + LL V + + AS
Sbjct: 167 NVAREVIKDIEDVEGDMAKGAKTLPIIWGKKRAAYVGVLFALLTVIASFLPVKAS 221
>sp|Q9UWY6|DGGGP_SULSO Digeranylgeranylglyceryl phosphate synthase OS=Sulfolobus
solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 /
P2) GN=ubiA-2 PE=1 SV=1
Length = 282
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 82/172 (47%), Gaps = 14/172 (8%)
Query: 28 LLKAIVPGLLVNIYEVGVNQLYDVEIDKINKPDLPLASGDLSIGAGITITCTCLLMSLAI 87
LL A+V GL+ V +N +YDVEIDKINKP P+ SG +S+ ++ ++ +A+
Sbjct: 40 LLSALVVGLIAAGGYV-INDVYDVEIDKINKPYRPIPSGKISVNKAKALSIALFIIGIAL 98
Query: 88 GIMLRSPPLISTIIMWFVLSSAYSVDLPFLRWKRNPFLATMYG--VLERGLAMPLGYFMH 145
I+L L+ ++ L Y+ DL + N +AT + GLA + +
Sbjct: 99 SILLNIYALVIALVTAIGLIY-YAKDLKKTGFYGNLLVATTTALSIFYGGLAF---FSDN 154
Query: 146 IQAQVRAWKTYRVFKNI--DVCSGCQVLDMPDVDGDKEHGIQTLSIALGKEK 195
++ Y F + ++ G + D +GD + ++TL+ LG K
Sbjct: 155 WLLRIIIPTLYAFFLTLIREIVKGIE-----DYNGDSLNNVKTLATTLGINK 201
>sp|Q9Z5D6|BCHG_RHOS4 Bacteriochlorophyll synthase 33 kDa chain OS=Rhodobacter
sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM
158) GN=bchG PE=4 SV=1
Length = 302
Score = 49.3 bits (116), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 98/222 (44%), Gaps = 33/222 (14%)
Query: 28 LLKAIVPGLLVNIYEVGVNQLYDVEIDKINKPDLPLASGDLSIGAGITITCTCLLMSLAI 87
LL ++ G LV N D +D +N+PD P+ SG + G+ I ++SLA+
Sbjct: 53 LLGMVLAGPLVCGMSQAANNWCDRHVDAVNEPDRPIPSGRIPGRWGLYIALLMTVLSLAV 112
Query: 88 GIMLRSPPLISTIIMWFVLSSAYSVDLPFLRWKRNPFLAT-MYGVLERGLAMPLG----- 141
G ML +T+ F + +A++ + +R KR+ + + + GL G
Sbjct: 113 GWMLGPWGFGATV---FGVLAAWAYSVEPIRLKRSGWWGPGLVALCYEGLPWFTGAAVLS 169
Query: 142 -----YFMHIQAQVRAWKTYRVFKNIDVCSGCQVLDMPDVDGDKEHGIQTLSIALGKEKV 196
+F+ A + A+ + + + D ++GD++HG+++L + LG E
Sbjct: 170 AGAPSFFIVTVALLYAFGAHGIMT---------LNDFKALEGDRQHGVRSLPVMLGPEVA 220
Query: 197 LWLG----------VYMLLVVYGALVIAGASSPFLESKLITI 228
L V LLV++G + AG + L ++L +
Sbjct: 221 AKLACTVMAMAQILVITLLVIWGKPIHAGIITALLVAQLFAM 262
>sp|A7I9E7|DGGGP_METB6 Digeranylgeranylglyceryl phosphate synthase OS=Methanoregula boonei
(strain 6A8) GN=Mboo_1843 PE=3 SV=1
Length = 279
Score = 48.1 bits (113), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 72/183 (39%), Gaps = 23/183 (12%)
Query: 45 VNQLYDVEIDKINKPDLPLASGDLSIGAGITITCTCLLMSLAIGIMLRSPPLISTIIMWF 104
+N +D ID IN+PD P+ SG +S A + + L+ LA+ + +P + ++
Sbjct: 54 INDYFDAAIDTINRPDRPIPSGAVSRNAALAWAFSLFLLGLAVSV-FTTPLCMGIALVNA 112
Query: 105 VLSSAYSVDLPFLRWKRNPFLATMYGVLERGLAMPLGYFMHIQAQVRAWKTYRVFKNIDV 164
+L Y+ R K PF +A W I
Sbjct: 113 LLLVLYAA-----RLKSTPFFG------NAAVAFLSASIFLFGGAYAGWHALLDMLPIAA 161
Query: 165 CSGCQVL------DMPDVDGDKEHGIQTLSIALGKEKVLWLGVYMLLVVYGALVIAGASS 218
+ +L D D++GD+ HG TL+I +G K ++ A IA ++
Sbjct: 162 ITFLAMLARELLKDAEDIEGDRAHGADTLAIRIGVRKTA-----LIAFACTAFAIAASAV 216
Query: 219 PFL 221
P+L
Sbjct: 217 PYL 219
>sp|B1L6Z7|DGGGP_KORCO Digeranylgeranylglyceryl phosphate synthase OS=Korarchaeum
cryptofilum (strain OPF8) GN=Kcr_1480 PE=3 SV=1
Length = 281
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 73/157 (46%), Gaps = 17/157 (10%)
Query: 44 GVNQLYDVEIDKINKPDLPLASGDLSIGAGITITCTCLLMSLAIGIMLRSPPLISTIIMW 103
+N YD EID INKP P+ SG +S + I L +A+ I L +
Sbjct: 54 AINDYYDAEIDAINKPYRPIPSGRISKREALNIYIALSLFGIALSIFLG--------FIE 105
Query: 104 FVLSSAYSVD-LPFLRW-KRNPFLATMYGVLERGLAMPLGYFMHIQAQVRAWKTYRVFKN 161
F++ +A+S+ + RW KR ++ G+A L F + A K +F +
Sbjct: 106 FLIVTAFSLSWYAYARWLKRTGVPGN--ALVSLGVAFTL-IFGSLAAGNLTNKVI-IFSS 161
Query: 162 IDVCSGCQ---VLDMPDVDGDKEHGIQTLSIALGKEK 195
+ S V + D+ GD+ HG++T+++ +G ++
Sbjct: 162 VAFTSNLIREFVKAVEDLPGDRAHGVRTIAVRIGVKR 198
>sp|Q2FN44|DGGGP_METHJ Digeranylgeranylglyceryl phosphate synthase OS=Methanospirillum
hungatei (strain JF-1 / DSM 864) GN=Mhun_0625 PE=3 SV=1
Length = 280
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 74/181 (40%), Gaps = 32/181 (17%)
Query: 45 VNQLYDVEIDKINKPDLPLASGDLSIGAGITITCTCLLMSLAIGIMLRSPPLI-----ST 99
+N YD EID IN+PD P+ SG + G + L+ I I+ PL ++
Sbjct: 54 INDYYDKEIDAINQPDRPIPSGQIIPGHALMYAILLFLIGNGIAILFTPLPLAGIAMGNS 113
Query: 100 IIMWFVLSSAYSVDLPFLRWKRNPFLATM-YGVLERGLAMPLGYFMHIQAQVR----AWK 154
+I+W S FL K+ P + + L + + G Q + A
Sbjct: 114 VILWLYAS--------FL--KKTPLIGNISVSYLAASIFLFGGAIQGTQGIISVFPIAGA 163
Query: 155 TYRVFKNIDVCSGCQVLDMPDVDGDKEHGIQTLSIALGKEKVLWL-------GVYMLLVV 207
T+ V ++ D D+ GD EHG +T + G ++L GV M L++
Sbjct: 164 TWGVMLARELIK-----DAEDMPGDNEHGARTFPLLYGIRATIYLALISATAGVLMSLLL 218
Query: 208 Y 208
Y
Sbjct: 219 Y 219
>sp|C6A2C9|DGGGP_THESM Digeranylgeranylglyceryl phosphate synthase OS=Thermococcus
sibiricus (strain MM 739 / DSM 12597) GN=TSIB_0711 PE=3
SV=1
Length = 279
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 69/168 (41%), Gaps = 30/168 (17%)
Query: 45 VNQLYDVEIDKINKPDLPLASGDLSIGAGITITCTCLLMSLAIGIMLRSPPLISTIIMWF 104
+N +D EIDKIN+P+ PL G LS I + L +AI I LI+ F
Sbjct: 56 INDYFDYEIDKINRPNRPLPRGALS--KNIALVYGISLGGVAILIAY----LINFEAFIF 109
Query: 105 VLSSAYSVDLPFLRWKRNPFLATM-----------YGVLERGLAMPLGYFMHIQAQVRAW 153
L + + L + K PF+ + YG + G GY V
Sbjct: 110 ALGAYLLMYLYARKLKPQPFIGNLVVATLTGITPIYGAIAVGKIGLAGYLALCAFLVNVA 169
Query: 154 KTYRVFKNIDVCSGCQVLDMPDVDGDKEHGIQTLSIALGKEKVLWLGV 201
+ +FK+I+ D++GDK G +TL I G E +GV
Sbjct: 170 R--EIFKDIE-----------DIEGDKAQGAKTLPIVWGIESSSKIGV 204
>sp|A6UVU6|DGGGP_META3 Digeranylgeranylglyceryl phosphate synthase OS=Methanococcus
aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=Maeo_1040
PE=3 SV=1
Length = 279
Score = 45.8 bits (107), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 70/163 (42%), Gaps = 29/163 (17%)
Query: 44 GVNQLYDVEIDKINKPDLPLASGDLSIGAGITITCTCLLMSLAIGIMLRSPPLISTIIMW 103
+N + D+EIDKINKP+ PL S +S+ + TI L++S GI++ L + I
Sbjct: 58 ALNDIQDIEIDKINKPNRPLPSNKISLKSA-TIFSYLLMIS---GIIIS---LFNMICFA 110
Query: 104 FVLSSAYSVDLPFLRWKRNPFLATMYGVLERGLAMPLG----------YFMHIQAQVRAW 153
L ++ + L ++KRN + + G G + + A W
Sbjct: 111 IALINSIVLYLYAKKYKRNKIIGNLIVAYLTGSIFIFGGASVGNVEITLILFLCALFATW 170
Query: 154 KTYRVFKNIDVCSGCQVLDMPDVDGDKEHGIQTLSIALGKEKV 196
+ + K D D+DGDK G+ +L I GK +
Sbjct: 171 -SREIIK-----------DYEDLDGDKSEGVISLPIKYGKNSI 201
>sp|O27170|DGGGP_METTH Digeranylgeranylglyceryl phosphate synthase OS=Methanothermobacter
thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM
10044 / NBRC 100330 / Delta H) GN=MTH_1098 PE=1 SV=1
Length = 281
Score = 45.4 bits (106), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 69/152 (45%), Gaps = 16/152 (10%)
Query: 45 VNQLYDVEIDKINKPDLPLASGDLSIG-AG---ITITCTCLLMSLAIGIMLRSPPLISTI 100
+N +D EID IN+P+ P+ SG +S G AG I + LM +G++ P L+
Sbjct: 51 INDYFDHEIDAINRPERPIPSGRISRGVAGVYSIILFALASLMGFYLGLL---PGLV--- 104
Query: 101 IMWFVLSSAYSVDLPFLRWKRNPFLATMYGVLERGLAMPLGYFMHIQAQVRAWKTYRVFK 160
V+SS+ + R K+ + + GL+ G + +VRA +
Sbjct: 105 ----VVSSSLLMVYYAWRLKKRCLVGNITISFLTGLSFVFGGI--VLGEVRASILLGFYA 158
Query: 161 NIDVCSGCQVLDMPDVDGDKEHGIQTLSIALG 192
+ + V DM DV+GD+ G TL I G
Sbjct: 159 FLMTMAREIVKDMEDVEGDRAEGATTLPITHG 190
>sp|O57753|DGGGP_PYRHO Digeranylgeranylglyceryl phosphate synthase OS=Pyrococcus
horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 /
NBRC 100139 / OT-3) GN=PH0027 PE=3 SV=1
Length = 277
Score = 45.1 bits (105), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 69/157 (43%), Gaps = 20/157 (12%)
Query: 45 VNQLYDVEIDKINKPDLPLASGDLSIGAGITITCTCLLMSLAIGIMLRSPPLISTIIMWF 104
+N +DVEIDKIN+P+ P+ G ++ A + L I ++L + + +F
Sbjct: 56 INDYFDVEIDKINRPNRPIPRGAITRKAAFYYGVLQYFIGLIIALLLGWSAFLFALGAYF 115
Query: 105 VLSSAYSVDLPFLRWKRNPFLATM------YGVLERGLAMPLGYFMHIQAQVRAWKTYRV 158
L+ Y+ L L + N +A + YG + G GY V + +
Sbjct: 116 -LTFVYAWKLKPLPFIGNVTVALLTAATPIYGAVGVGRIDLAGYLAICAFLVNVSR--EI 172
Query: 159 FKNIDVCSGCQVLDMPDVDGDKEHGIQTLSIALGKEK 195
K+I+ D +GDK G +TL I +GK+K
Sbjct: 173 MKDIE-----------DFEGDKRLGARTLPIMIGKKK 198
>sp|C5A1J7|DGGGP_THEGJ Digeranylgeranylglyceryl phosphate synthase OS=Thermococcus
gammatolerans (strain DSM 15229 / JCM 11827 / EJ3)
GN=TGAM_1764 PE=3 SV=1
Length = 276
Score = 45.1 bits (105), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 74/158 (46%), Gaps = 8/158 (5%)
Query: 45 VNQLYDVEIDKINKPDLPLASGDLSIGAGITITCTCLLMSLAIGIMLRSPPLISTIIMWF 104
+N +D EID+IN+P+ PL G + + + + LA+ +++ S + ++ +
Sbjct: 56 INDYFDYEIDRINRPERPLPRGAMDRRTALWYSLFLFAVGLALALLI-SLKAFAFALLAY 114
Query: 105 VLSSAYSVDLPFLRWKRNPFLATMYGVLERGLAMPLGYFMHIQAQVRAWKTYRVFKNIDV 164
+ Y+ L L + N +A + GV A+ +G ++ T V +
Sbjct: 115 ITMFLYAWKLKPLPFIGNIAVAALTGVTPLYGAIAVG-------KIGLAGTLAVCAFLVN 167
Query: 165 CSGCQVLDMPDVDGDKEHGIQTLSIALGKEKVLWLGVY 202
+ V D+ DV+GD + G +TL I LG+ K ++ +
Sbjct: 168 VAREIVKDIEDVEGDLKKGAKTLPIILGRRKAAYVAAF 205
>sp|Q5JDN5|DGGGP_PYRKO Digeranylgeranylglyceryl phosphate synthase OS=Pyrococcus
kodakaraensis (strain ATCC BAA-918 / JCM 12380 / KOD1)
GN=TK1957 PE=3 SV=1
Length = 277
Score = 44.7 bits (104), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 74/173 (42%), Gaps = 42/173 (24%)
Query: 45 VNQLYDVEIDKINKPDLPLASGDLSIGAGITITCTCLLMSLAIGIMLRSPPLISTIIMW- 103
+N +D EIDKIN+P+ PL G +S A + + A GI+L I +W
Sbjct: 56 INDYFDYEIDKINRPERPLPRGAMSRKAALWYSVAL----FATGIVLA-----WFINIWD 106
Query: 104 FVLSSAYSVDLPFLRWKRN--PFLAT-----------MYGVL---ERGLAMPLGYFMHIQ 147
F+L+ V + WK PF+ +YG + E GLA L +
Sbjct: 107 FLLAIVAYVTMFIYAWKLKPMPFIGNVVVASLTGATPLYGAIAVGEIGLAGTLALCAFLV 166
Query: 148 AQVRAWKTYRVFKNIDVCSGCQVLDMPDVDGDKEHGIQTLSIALGKEKVLWLG 200
R V K+I+ D++GD G +TL I +G+++ ++G
Sbjct: 167 NVAR-----EVIKDIE-----------DIEGDMAKGAKTLPILIGRKRAAYVG 203
>sp|A0B8A0|DGGGP_METTP Digeranylgeranylglyceryl phosphate synthase OS=Methanosaeta
thermophila (strain DSM 6194 / PT) GN=Mthe_1142 PE=3
SV=1
Length = 267
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 73/164 (44%), Gaps = 12/164 (7%)
Query: 45 VNQLYDVEIDKINKPDLPLASGDLSIGAGITITCTCLLMSLAIGIMLRSPPLISTIIMWF 104
+N +D EID +N+PD P+ SG +S A + + + I ++ L ++ F
Sbjct: 53 INDYFDREIDAVNRPDRPIPSGRISPRAALIWSVALFIAGCLIAGLINQSCLALALLNSF 112
Query: 105 VLSSAYSVDLPFLRWKRNPFLATMYGV--LERGLAMPLGYFMHIQAQVRAWKTYRVFKNI 162
VL Y+ L L N ++ + G L GLA + + A+ + + +
Sbjct: 113 VL-IIYAARLKGLPVAGNIAISYLTGTTFLFGGLAAS-------PSSITAFLS--ILSAL 162
Query: 163 DVCSGCQVLDMPDVDGDKEHGIQTLSIALGKEKVLWLGVYMLLV 206
S V D+ D+ GD HG +TL +GK K L +L+V
Sbjct: 163 ATLSREIVKDIEDLPGDLAHGAKTLPAFIGKRKSFVLASLVLIV 206
>sp|Q46BD9|DGGGP_METBF Digeranylgeranylglyceryl phosphate synthase OS=Methanosarcina
barkeri (strain Fusaro / DSM 804) GN=Mbar_A1863 PE=3
SV=1
Length = 289
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 71/159 (44%), Gaps = 14/159 (8%)
Query: 45 VNQLYDVEIDKINKPDLPLASGDLSIGAGITITCTCL----LMSLAIGIMLRSPPLISTI 100
+N +DV ID IN+PD P+ SG + + + + T L++ +I + L +++
Sbjct: 70 INDYFDVRIDSINRPDRPIPSGRMKLKEALYFSYTLFALGTLLAFSINPICGVIALFNSL 129
Query: 101 IMWFVLSSAYSVDLPFLRWKRNPFLATMYGVLERGLAMPLGYFMHIQAQVRAWKTYRVFK 160
++ F Y+ L K P L + G + G + ++A +
Sbjct: 130 VLIF-----YAKTL-----KGTPLLGNLSIGYLTGSSFLFGASVFGLEGLKALFVLFLLA 179
Query: 161 NIDVCSGCQVLDMPDVDGDKEHGIQTLSIALGKEKVLWL 199
+ + + V D+ D++GDK G TL + +G +K +L
Sbjct: 180 ALAITAREIVKDIEDMEGDKMEGADTLPLRVGAKKASYL 218
>sp|Q3INH7|DGGGP_NATPD Digeranylgeranylglyceryl phosphate synthase OS=Natronomonas
pharaonis (strain DSM 2160 / ATCC 35678) GN=NP_4470A
PE=3 SV=1
Length = 277
Score = 42.7 bits (99), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 76/173 (43%), Gaps = 17/173 (9%)
Query: 31 AIVPGLLVNIYEVGVNQLYDVEIDKINKPDLPLASGDLSIGAGITITCTCLLMSLAIGIM 90
A+V +L +N +D +ID IN+PD P+ G +S + + L ++A+ +
Sbjct: 42 AVVATVLATGAGNAINDYFDRDIDAINEPDRPIPRGAVSPRGALVYSVA--LFAVAVVLT 99
Query: 91 LRSPPL-ISTIIMWFVLSSAYSVDLPFLRWKRNPFLATMYGVLERGLAMPLGYFMHIQAQ 149
L P L I+ + V AY+ L N +A + G F++ A
Sbjct: 100 LLLPWLAIAIAAINLVALVAYTEVFKGLPGVGNALVAYLTG----------STFLYGGAA 149
Query: 150 VRA-WKTYRVFKNIDVCSGCQ---VLDMPDVDGDKEHGIQTLSIALGKEKVLW 198
V V + C+ V D+ D+DGD+ G++TL I +G+ + L+
Sbjct: 150 VGGDLAAVVVLFALAACATMAREIVKDVEDIDGDRAEGLRTLPIVIGERRSLY 202
>sp|A2SRL0|DGGGP_METLZ Digeranylgeranylglyceryl phosphate synthase OS=Methanocorpusculum
labreanum (strain ATCC 43576 / DSM 4855 / Z)
GN=Mlab_0795 PE=3 SV=1
Length = 282
Score = 42.4 bits (98), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 91/221 (41%), Gaps = 38/221 (17%)
Query: 45 VNQLYDVEIDKINKPDLPLASGDLS-----------IGAGITITCTCLLMSLAIGIMLRS 93
+N +D+EIDK+N+PD P+ SG +S AG+ C + LAI ++
Sbjct: 54 LNDYFDLEIDKVNRPDRPIPSGKVSPKGAVVWAGILFAAGVAAACFTNIWCLAIALV--- 110
Query: 94 PPLISTIIMWFVLSSAYSVDLPFLRWKRNPFLATMYGVLERGLAMPLGYFMHIQAQVRAW 153
+++ + ++ ++K PFL + G G F+
Sbjct: 111 -----NVVLLIIYAA---------KFKGIPFLGNLSVAYLSGSIFLFGGFLVGPESFLVM 156
Query: 154 KTYRVFKNIDVCSGCQVLDMPDVDGDKEHGIQTLSIALGKEKVLWLGV-YMLLVVYGALV 212
+ + D D++GD+ G +TL + +G K L V ++L V + V
Sbjct: 157 LPLFAITFFGTLARELLKDAEDIEGDRLGGARTLPMQIGVRKTSVLAVIFVLFAVLCSFV 216
Query: 213 IAGASSPFLESKLITIIGHSTL-AFLLLQ--RARNVDVSSQ 250
PFL ++ ++ + AF+LL RA + S++
Sbjct: 217 ------PFLTWGVVYLVLIGVVDAFILLVTLRALKFETSTE 251
>sp|A4YI21|DGGGP_METS5 Digeranylgeranylglyceryl phosphate synthase OS=Metallosphaera
sedula (strain ATCC 51363 / DSM 5348) GN=Msed_1933 PE=3
SV=1
Length = 284
Score = 42.4 bits (98), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 16/26 (61%), Positives = 22/26 (84%)
Query: 45 VNQLYDVEIDKINKPDLPLASGDLSI 70
+N +YDVEID+INKPD P+ SG +S+
Sbjct: 54 INDVYDVEIDRINKPDRPIPSGAVSL 79
>sp|Q8TWS9|DGGGP_METKA Digeranylgeranylglyceryl phosphate synthase OS=Methanopyrus
kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC
100938) GN=MK0953 PE=3 SV=1
Length = 271
Score = 42.0 bits (97), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 65/153 (42%), Gaps = 16/153 (10%)
Query: 45 VNQLYDVEIDKINKPDLPLASGDLSIGAGITITCTCLLMSLAIGIMLRSPPLISTII--M 102
+N +D E+D +N+PD P+ SG +S + C A+G+ + +T+I M
Sbjct: 52 INDYFDAEVDAVNRPDRPIPSGRVSPRSARMFALGCF----AVGVGM------ATVINRM 101
Query: 103 WFVLSSAYSVDLPFLRW--KRNPFLATMYGVLERGLAMPLGYFMHIQAQVRAWKTYRVFK 160
+++ SV L W K P + + G G + + W F
Sbjct: 102 CLAIAALNSVLLYLYSWRLKGTPLIGNVMVSYLVGSCFLFGAAVGQRPAPAVWLFLLAFL 161
Query: 161 NIDVCSGCQVLDMPDVDGDKEHGIQTLSIALGK 193
V + D+ DV+GD G++TL IA G+
Sbjct: 162 ANLVREILK--DLEDVEGDAALGLKTLPIAYGE 192
>sp|Q8PV96|DGGGP_METMA Digeranylgeranylglyceryl phosphate synthase OS=Methanosarcina mazei
(strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833
/ OCM 88) GN=MM_2075 PE=3 SV=2
Length = 289
Score = 40.8 bits (94), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 78/186 (41%), Gaps = 8/186 (4%)
Query: 16 QFADLTPTFFIGLLKAIVPGLLVNIYEVGVNQLYDVEIDKINKPDLPLASGDLSIGAGIT 75
F D P GL+ +V LV+ +N +D++ID IN+P+ P+ SG + A
Sbjct: 43 NFEDAFPFLDAGLVFLVV--FLVSGAGNAINDYFDIKIDSINRPERPIPSG--RVKAKEA 98
Query: 76 ITCTCLLMSLAIGIMLRSPPLISTIIMWFVLSSAYSVDLPFLRWKRNPFLATMYGVLERG 135
+ LL +L I I++I L ++ + L K P L + G
Sbjct: 99 FYFSYLLFALGTLIAFS----INSICGSIALFNSLLLILYAKTLKGTPLLGNLSIGYLTG 154
Query: 136 LAMPLGYFMHIQAQVRAWKTYRVFKNIDVCSGCQVLDMPDVDGDKEHGIQTLSIALGKEK 195
G + ++A + + + + V D+ D++GD G TL + +G +K
Sbjct: 155 SVFLFGASIFGFGGIKALSVLFLLAALAITAREIVKDIEDMEGDSLEGADTLPLRIGAKK 214
Query: 196 VLWLGV 201
+L V
Sbjct: 215 AGYLAV 220
>sp|Q9V2P5|DGGGP_PYRAB Digeranylgeranylglyceryl phosphate synthase OS=Pyrococcus abyssi
(strain GE5 / Orsay) GN=PYRAB00300 PE=3 SV=2
Length = 277
Score = 40.4 bits (93), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 68/157 (43%), Gaps = 20/157 (12%)
Query: 45 VNQLYDVEIDKINKPDLPLASGDLSIGAGITITCTCLLMSLAIGIMLRSPPLISTIIMWF 104
+N +DVEID++N+P+ P+ G + + ++ LA+ L L+ + +
Sbjct: 56 INDYFDVEIDRVNRPNRPIPRGAIPRKVALYYALLQYMLGLALARFLGVEALLFA-LGAY 114
Query: 105 VLSSAYSVDLPFLRWKRNPFLATM------YGVLERGLAMPLGYFMHIQAQVRAWKTYRV 158
L+ Y+ L L + N +A + YG L G GY V + +
Sbjct: 115 ALTFIYAWKLKPLPFIGNVAVALLTAATPIYGALGVGRVGLAGYLAICAFLVNVSR--EI 172
Query: 159 FKNIDVCSGCQVLDMPDVDGDKEHGIQTLSIALGKEK 195
K+I+ D++GD + G +TL I +GK +
Sbjct: 173 MKDIE-----------DIEGDMKMGAKTLPIIIGKRR 198
>sp|Q8TZM7|DGGGP_PYRFU Digeranylgeranylglyceryl phosphate synthase OS=Pyrococcus furiosus
(strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1)
GN=PF1963 PE=3 SV=1
Length = 277
Score = 40.4 bits (93), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 64/156 (41%), Gaps = 20/156 (12%)
Query: 46 NQLYDVEIDKINKPDLPLASGDLSIGAGITITCTCLLMSLAIGIMLRSPPLISTIIMWFV 105
N +D EIDKIN+P+ PL G +S A + + + L + I +F
Sbjct: 57 NDYFDYEIDKINRPNRPLPRGAMSRRAALYYALLQYAIGSILAYFLNIRAFVFATIAYF- 115
Query: 106 LSSAYSVDLPFLRWKRNPFLATM------YGVLERGLAMPLGYFMHIQAQVRAWKTYRVF 159
L+ Y L L N +A + YG + G GY V + +
Sbjct: 116 LTFLYGWKLKPLPLVGNITVAALTAATPIYGAIGVGRIGLAGYLAICAFLVNVSR--EIM 173
Query: 160 KNIDVCSGCQVLDMPDVDGDKEHGIQTLSIALGKEK 195
K+I+ D++GDK G +TL I +G++K
Sbjct: 174 KDIE-----------DIEGDKALGARTLPIIIGEKK 198
>sp|Q18J00|DGGGP_HALWD Digeranylgeranylglyceryl phosphate synthase OS=Haloquadratum
walsbyi (strain DSM 16790) GN=HQ_1884A PE=3 SV=1
Length = 286
Score = 40.0 bits (92), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 71/170 (41%), Gaps = 22/170 (12%)
Query: 45 VNQLYDVEIDKINKPDLPLASGDLSIGAGITITCTCLLMSLAIGIMLRSPPLISTIIMWF 104
+N +D IDKIN+P P+ G +S I + + ++ +L PLI+ ++
Sbjct: 62 INDYFDRAIDKINRPMRPIPRGAISERGAIVFSGFLFVAAVVSTSVL---PLIAIVLALM 118
Query: 105 VLSS--AYSVDLPFLRWKRNPFLATM------YGVLERGLAMPLGYFMHIQAQVRAWKTY 156
L + AY+ L N +A + +G G G + A T
Sbjct: 119 NLLALVAYTELFKGLPGVGNAIVAYLTGSTFLFGAAAIGRITDFGVVVLFILAALATATR 178
Query: 157 RVFKNIDVCSGCQVLDMPDVDGDKEHGIQTLSIALGKEKVLWLGVYMLLV 206
+ K+I+ D+DGD++ G+QTL I +G + +LLV
Sbjct: 179 EIIKDIE-----------DLDGDRKEGLQTLPIVIGVTPAYRVATGVLLV 217
>sp|Q57727|DGGGP_METJA Digeranylgeranylglyceryl phosphate synthase OS=Methanocaldococcus
jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM
10045 / NBRC 100440) GN=MJ0279 PE=3 SV=1
Length = 283
Score = 37.4 bits (85), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 20/27 (74%)
Query: 45 VNQLYDVEIDKINKPDLPLASGDLSIG 71
+N ++D+EID+INKP PL SG + +
Sbjct: 61 INDIFDIEIDRINKPSRPLPSGKIKLN 87
>sp|A9A8Y7|DGGGP_METM6 Digeranylgeranylglyceryl phosphate synthase OS=Methanococcus
maripaludis (strain C6 / ATCC BAA-1332) GN=MmarC6_0995
PE=3 SV=1
Length = 278
Score = 37.4 bits (85), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 14/63 (22%)
Query: 44 GVNQLYDVEIDKINKPDLPLASGDLSIGA-----------GITIT---CTCLLMSLAIGI 89
+N +YD++IDKINKP P+ S +S+G G+ I+ TC LM++ I
Sbjct: 56 ALNDIYDLKIDKINKPKRPIPSKRISLGEARIFSYLLVVMGLIISMFNITCFLMAVLNSI 115
Query: 90 MLR 92
+L+
Sbjct: 116 VLQ 118
>sp|Q38833|CHLG_ARATH Chlorophyll synthase, chloroplastic OS=Arabidopsis thaliana GN=CHLG
PE=2 SV=1
Length = 387
Score = 36.6 bits (83), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 94/261 (36%), Gaps = 82/261 (31%)
Query: 41 YEVGVNQLYDVEIDKINKPDLPLASGDLS-----------------------IGAGITIT 77
Y +N YD +ID IN+P P+ SG +S + AG T T
Sbjct: 150 YTQTINDWYDRDIDAINEPYRPIPSGAISEPEVITQVWVLLLGGLGIAGILDVWAGHT-T 208
Query: 78 CTCLLMSLA---IGIMLRSPPLISTIIMW---FVLSSAYSVDLPFLRWKRNPFLAT---- 127
T ++L + + +PPL W F L ++Y + LP+ W T
Sbjct: 209 PTVFYLALGGSLLSYIYSAPPLKLKQNGWVGNFALGASY-ISLPW--WAGQALFGTLTPD 265
Query: 128 ------MYGVLERGLAMPLGYFMHIQAQVRAWKTYRVFKNIDVCSGCQVLDMPDVDGDKE 181
+Y + G+A+ V D V+GD+
Sbjct: 266 VVVLTLLYSIAGLGIAI-------------------------------VNDFKSVEGDRA 294
Query: 182 HGIQTLSIALGKEKVLWLGVYML----LVVYGALVIAGASSPFLESKLIT-IIGHSTLAF 236
G+Q+L +A G E W+ V + L V G L+ +G P+ L+ II F
Sbjct: 295 LGLQSLPVAFGTETAKWICVGAIDITQLSVAGYLLASG--KPYYALALVALIIPQIVFQF 352
Query: 237 -LLLQRARNVDVSSQAAILSF 256
L+ DV QA+ F
Sbjct: 353 KYFLKDPVKYDVKYQASAQPF 373
>sp|A8A9J7|DGGGP_IGNH4 Digeranylgeranylglyceryl phosphate synthase OS=Ignicoccus
hospitalis (strain KIN4/I / DSM 18386 / JCM 14125)
GN=Igni_0416 PE=3 SV=2
Length = 303
Score = 36.2 bits (82), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 13/21 (61%), Positives = 17/21 (80%)
Query: 46 NQLYDVEIDKINKPDLPLASG 66
N +DVEIDK+NKP+ P+ SG
Sbjct: 58 NDYFDVEIDKVNKPERPIPSG 78
>sp|A6VHU1|DGGGP_METM7 Digeranylgeranylglyceryl phosphate synthase OS=Methanococcus
maripaludis (strain C7 / ATCC BAA-1331) GN=MmarC7_0950
PE=3 SV=1
Length = 278
Score = 36.2 bits (82), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 21/27 (77%)
Query: 44 GVNQLYDVEIDKINKPDLPLASGDLSI 70
+N +YD++IDKINKP+ P+ S LS+
Sbjct: 56 ALNDIYDLKIDKINKPERPIPSKRLSL 82
>sp|Q5W6H5|CHLG_ORYSJ Chlorophyll synthase, chloroplastic OS=Oryza sativa subsp. japonica
GN=CHLG PE=2 SV=1
Length = 376
Score = 34.7 bits (78), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 96/270 (35%), Gaps = 80/270 (29%)
Query: 32 IVPGLLVNIYEVGVNQLYDVEIDKINKPDLPLASGDLSIGAGITITCTC----------- 80
I+ G + Y +N YD +ID IN+P P+ SG +S IT
Sbjct: 130 IMSGPCLTGYTQTINDWYDRDIDAINEPYRPIPSGAISENEVITQIWALLLAGLGLGALL 189
Query: 81 ---------LLMSLAIGIMLRS-----PPLISTIIMW---FVLSSAYSVDLPFLRWKRNP 123
++ LA+G L S PPL W F L ++Y + LP+ W
Sbjct: 190 DVWAGHDFPIIFYLAVGGSLLSYIYSAPPLKLKQNGWIGNFALGASY-IGLPW--WAGQA 246
Query: 124 FLAT----------MYGVLERGLAMPLGYFMHIQAQVRAWKTYRVFKNIDVCSGCQVLDM 173
T +Y + G+A+ V D
Sbjct: 247 LFGTLTPDIVVLTSLYSIAGLGIAI-------------------------------VNDF 275
Query: 174 PDVDGDKEHGIQTLSIALGKEKVLWLGVYML----LVVYGALVIAGASSPFLESKLITI- 228
V+GD+ G+Q+L +A G E W+ V + L V G L +G P+ L+ +
Sbjct: 276 KSVEGDRALGLQSLPVAFGMETAKWICVGAIDITQLSVAGYLFSSG--KPYYALALLGLT 333
Query: 229 IGHSTLAF-LLLQRARNVDVSSQAAILSFY 257
I F L+ DV QA+ F+
Sbjct: 334 IPQVVFQFQYFLKDPVKYDVKYQASAQPFF 363
>sp|A4G0P3|DGGGP_METM5 Digeranylgeranylglyceryl phosphate synthase OS=Methanococcus
maripaludis (strain C5 / ATCC BAA-1333) GN=MmarC5_1730
PE=3 SV=1
Length = 278
Score = 34.3 bits (77), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 14/63 (22%)
Query: 44 GVNQLYDVEIDKINKPDLPLASGDLS-----------IGAGITIT---CTCLLMSLAIGI 89
+N +YD++ID+INKP+ P+ S +S + G+ I+ TC LM++ I
Sbjct: 56 ALNDIYDLKIDRINKPERPIPSKRISLTNARIFSYLLVFTGLCISLFNITCFLMAVLNSI 115
Query: 90 MLR 92
+L+
Sbjct: 116 VLQ 118
>sp|Q6LWN2|DGGGP_METMP Digeranylgeranylglyceryl phosphate synthase OS=Methanococcus
maripaludis (strain S2 / LL) GN=MMP1677 PE=3 SV=1
Length = 278
Score = 34.3 bits (77), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 28/47 (59%)
Query: 44 GVNQLYDVEIDKINKPDLPLASGDLSIGAGITITCTCLLMSLAIGIM 90
+N +YD++ID+INKP P+ S +++ + + ++M L I +
Sbjct: 56 ALNDIYDLKIDRINKPKRPIPSKRITLNNAKVFSYSLVVMGLFISLF 102
>sp|A5ULR8|DGGGP_METS3 Digeranylgeranylglyceryl phosphate synthase OS=Methanobrevibacter
smithii (strain PS / ATCC 35061 / DSM 861) GN=Msm_0941
PE=3 SV=1
Length = 283
Score = 34.3 bits (77), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 32/152 (21%), Positives = 63/152 (41%), Gaps = 4/152 (2%)
Query: 45 VNQLYDVEIDKINKPDLPLASGDLSIGAGITITCTCLLMSLAIGIMLRSPPLIST-IIMW 103
+N +D +ID INKP P+ SG +S+ +++ +G ++ L+ T I
Sbjct: 51 INDYFDYKIDLINKPQRPIPSGRISLDNAKNYAYLLFILAAIVGFLISC--LVDTWIPCT 108
Query: 104 FVLSSAYSVDLPFLRWKRNPFLATMYGVLERGLAMPLGYFMHIQAQVRAWKTYRVFKNID 163
V+ S + L + K P + + GL + + + F +
Sbjct: 109 IVIFSDIILYLYAYKLKSTPLIGNLTVGFMTGLCFIFAGYTFNEGLIIYESYLLAFFALI 168
Query: 164 VCSGCQVL-DMPDVDGDKEHGIQTLSIALGKE 194
+ + ++ D+ D++GD G +T I G +
Sbjct: 169 MTTAREITKDIEDMEGDMAEGAKTFPILYGPK 200
>sp|Q8TS44|DGGGP_METAC Digeranylgeranylglyceryl phosphate synthase OS=Methanosarcina
acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 /
C2A) GN=MA_0961 PE=3 SV=1
Length = 289
Score = 33.9 bits (76), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 38/179 (21%), Positives = 73/179 (40%), Gaps = 50/179 (27%)
Query: 45 VNQLYDVEIDKINKPDLPLASGD-----------LSIGAG----ITITCTCLLMSLAIGI 89
+N +D++ID IN+P+ P+ SG L AG +I C L++L +
Sbjct: 70 INDYFDIKIDSINRPERPIPSGRVQAKEALYFSYLLFAAGTLLAFSINSICGLIALFNSL 129
Query: 90 M-------LRSPPLISTIIMWFVLSSAYSVDLPFLRWKRNPFLATMYGVLERGLAMPLGY 142
+ L+ PL+ + + ++ S + F A+++G+ GL
Sbjct: 130 LLILYAKTLKGTPLLGNLSIGYLTGSVFL------------FGASVFGL--EGLKTLFVL 175
Query: 143 FMHIQAQVRAWKTYRVFKNIDVCSGCQVLDMPDVDGDKEHGIQTLSIALGKEKVLWLGV 201
F+ + A + + D+ D++GD+ TL + +G +K +L V
Sbjct: 176 FLLAALAITAREIVK--------------DIEDMEGDRLEDADTLPLRIGAKKAGYLAV 220
>sp|Q15YQ3|NQRD_PSEA6 Na(+)-translocating NADH-quinone reductase subunit D
OS=Pseudoalteromonas atlantica (strain T6c / ATCC
BAA-1087) GN=nqrD PE=3 SV=1
Length = 210
Score = 33.1 bits (74), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 52/98 (53%), Gaps = 5/98 (5%)
Query: 1 MQTIDMTSVSLLAPQQFADLTPTFFIGLLKAIVPGLLVNIYEVGVNQLYDVEIDKINKPD 60
++T + S++L A F++L FI ++++ +P + I ++ + + +D+I K
Sbjct: 38 LETALVMSLALTAVTAFSNL----FISMIRSQIPSSVRIIVQMTIIASLVIVVDQILKAY 93
Query: 61 LPLASGDLSIGAGITITCTCLLMSLAIGIMLRSPPLIS 98
S LS+ G+ IT C++M A ++SPP IS
Sbjct: 94 SYEISKQLSVFVGLIIT-NCIVMGRAEAFAMKSPPFIS 130
>sp|A6UQV8|DGGGP_METVS Digeranylgeranylglyceryl phosphate synthase OS=Methanococcus
vannielii (strain SB / ATCC 35089 / DSM 1224)
GN=Mevan_0977 PE=3 SV=1
Length = 278
Score = 32.7 bits (73), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 37/75 (49%), Gaps = 4/75 (5%)
Query: 20 LTPTFFIGLLKAIVPGLLVNIYEVG----VNQLYDVEIDKINKPDLPLASGDLSIGAGIT 75
+ F G L ++ LV + G +N +YD++ID+INKP P+ S +S+
Sbjct: 28 IASNFTFGALFPLILAFLVVFFICGFGNSLNDIYDLKIDRINKPFRPIPSKRISLTDAKV 87
Query: 76 ITCTCLLMSLAIGIM 90
+ + ++ L I +
Sbjct: 88 FSYSIMIFGLIISLF 102
>sp|Q7N7F1|NQRD_PHOLL Na(+)-translocating NADH-quinone reductase subunit D
OS=Photorhabdus luminescens subsp. laumondii (strain
TT01) GN=nqrD PE=3 SV=1
Length = 209
Score = 32.7 bits (73), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 23 TFFIGLLKAIVPGLLVNIYEVGVNQLYDVEIDKINKPDLPLASGDLSIGAGITITCTCLL 82
+FFI L++ +PG + I ++ + + +D+I + S LS+ G+ IT C++
Sbjct: 56 SFFISLIRHYIPGSVRIIVQMAIIASLVIVVDQILQAYAYEISKQLSVFVGLIIT-NCIV 114
Query: 83 MSLAIGIMLRSPPLIS 98
M A ++SPP+ S
Sbjct: 115 MGRAEAYAMKSPPIES 130
>sp|Q253X2|NQRD_CHLFF Na(+)-translocating NADH-quinone reductase subunit D
OS=Chlamydophila felis (strain Fe/C-56) GN=nqrD PE=3
SV=1
Length = 213
Score = 32.3 bits (72), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 44/90 (48%), Gaps = 1/90 (1%)
Query: 7 TSVSLLAPQQFADLTPTFFIGLLKAIVPGLLVNIYEVGVNQLYDVEIDKINKPDLPLASG 66
T++++ F +FF+ LL+ I P + I ++ + L+ + ID+ K S
Sbjct: 40 TAITMGLAVSFVTGCSSFFVSLLRKITPDSVRMITQLIIISLFVIVIDQFLKAFFFNISK 99
Query: 67 DLSIGAGITITCTCLLMSLAIGIMLRSPPL 96
LS+ G+ IT C++M A + PP+
Sbjct: 100 TLSVFVGLIIT-NCIVMGRAESLARNVPPI 128
>sp|P33326|BCHG_CHLAA Bacteriochlorophyll synthase 34 kDa chain OS=Chloroflexus
aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl)
GN=bchG PE=4 SV=2
Length = 310
Score = 32.3 bits (72), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 66/153 (43%), Gaps = 11/153 (7%)
Query: 45 VNQLYDVEIDKINKPDLPLASGDLSIGAGITITCTCLLMSLAIGIML-RSPPLISTIIMW 103
VN D E+D IN+P + SG +S+ +T + +I + L R + +
Sbjct: 85 VNDYADREVDAINEPHRLIPSGQVSLRHVYILTAVLTWIGASIALFLGRQVAFFVALGLV 144
Query: 104 FVLSSAYSVDLPFLRWKRNPFLAT-MYGVLERGLAMPLGY--FMHIQAQVRAWKTYRVFK 160
F L AYS L +R KRN ++ + + GLA G+ F + + T +
Sbjct: 145 FAL--AYS--LRPIRGKRNGWIGNALVAISYEGLAWMAGHAAFAPLTGES---VTIALLY 197
Query: 161 NIDVCSGCQVLDMPDVDGDKEHGIQTLSIALGK 193
++ V D + GD GI+++ + GK
Sbjct: 198 SLGAHGIMTVNDFKSIRGDTIMGIRSIPVQYGK 230
>sp|Q0BNI0|UBIA_FRATO 4-hydroxybenzoate octaprenyltransferase OS=Francisella tularensis
subsp. holarctica (strain OSU18) GN=ubiA PE=3 SV=1
Length = 284
Score = 32.3 bits (72), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 72/169 (42%), Gaps = 43/169 (25%)
Query: 45 VNQLYDVEIDK--INKPDLPLASGDLSIGAGITITCTCLLMSLAIGIMLRSPPLISTIIM 102
+N + DV+ DK PL SG LSI I + C+ S L++ I +
Sbjct: 62 INDIADVDFDKHVARTNTRPLTSGQLSIKNAIWL---CI-----------SLTLVAFICV 107
Query: 103 WFVLSSAYSVDLPFLRWKRNPFLATMYGVLER---------GLAMPLGYFM---HIQAQ- 149
F+ + Y++ L F+ FLA +Y +R GLA G FM IQ Q
Sbjct: 108 LFL--NLYTILLSFVA----LFLAILYPFCKRFFAIPQLILGLAFNFGIFMAFSAIQNQI 161
Query: 150 -VRAWKTYRVFKNIDVC---SGCQVLDMPDVDGDKEHGIQTLSIALGKE 194
V AW +F +C + + + D + D E GI++ ++ G +
Sbjct: 162 PVEAW----IFYIATICWTIAYDTIYALADREFDLETGIKSSAVLFGNK 206
>sp|P64690|Y105_MYCBO Uncharacterized protein Mb0105 OS=Mycobacterium bovis (strain ATCC
BAA-935 / AF2122/97) GN=Mb0105 PE=4 SV=1
Length = 661
Score = 32.3 bits (72), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 50/121 (41%), Gaps = 16/121 (13%)
Query: 135 GLAMPLGYFMHIQAQVRAWKTYRVFKNIDVCSGCQVLDMPDVDGDKEHGIQTLSIALGKE 194
G+ + +GY A R ++ V + I +GC L G + +G S+ + +
Sbjct: 375 GVVLAIGYAAGFAALRRRGNSWPVGRLIAWLTGCAALVFTSGSGVRAYGSAMFSVHMAEH 434
Query: 195 KVLWLGVYMLLVVYGALVIA-------GASSP---------FLESKLITIIGHSTLAFLL 238
L + + +LLV+ G + +A G P L S++ T + H AF+L
Sbjct: 435 MTLNMFIPVLLVLGGPVTLALRVLPVTGDGRPPGAREWLTWLLHSRVTTFLSHPITAFVL 494
Query: 239 L 239
Sbjct: 495 F 495
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.327 0.141 0.428
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 91,717,853
Number of Sequences: 539616
Number of extensions: 3656787
Number of successful extensions: 10883
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 85
Number of HSP's that attempted gapping in prelim test: 10790
Number of HSP's gapped (non-prelim): 149
length of query: 262
length of database: 191,569,459
effective HSP length: 115
effective length of query: 147
effective length of database: 129,513,619
effective search space: 19038501993
effective search space used: 19038501993
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 60 (27.7 bits)