BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 044155
(239 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 96.7 bits (239), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 109/226 (48%), Gaps = 5/226 (2%)
Query: 4 HNHILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIVHAL 63
H ++L+L G C+ +LV+ + G++ + P+ PL R +IA+ L
Sbjct: 94 HRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQ-PPLDWPKRQRIALGSARGL 152
Query: 64 AYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMGTLGYCAP 123
AYLH I+ R+ K + IL +EE A + DF L+ + + H+ V GT+G+ AP
Sbjct: 153 AYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGTIGHIAP 212
Query: 124 EYMRTGVFNEKSNXXXXXXXXXXXXTGWDVSDLVKDVHDLVCPFSEYLKNCFEDNRFTEI 183
EY+ TG +EK++ TG DL + +D +++K ++ + +
Sbjct: 213 EYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEAL 272
Query: 184 VDHIVVEDVSSIEKEQQLHASAQVTFECIKDSPADRPSMVDVAKKL 229
VD D+ K++++ QV C + SP +RP M +V + L
Sbjct: 273 VDV----DLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRML 314
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 94.7 bits (234), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 108/226 (47%), Gaps = 5/226 (2%)
Query: 4 HNHILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIVHAL 63
H ++L+L G C+ +LV+ + G++ + P+ PL R +IA+ L
Sbjct: 86 HRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQ-PPLDWPKRQRIALGSARGL 144
Query: 64 AYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMGTLGYCAP 123
AYLH I+ R+ K + IL +EE A + DF L+ + + H+ V G +G+ AP
Sbjct: 145 AYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGXIGHIAP 204
Query: 124 EYMRTGVFNEKSNXXXXXXXXXXXXTGWDVSDLVKDVHDLVCPFSEYLKNCFEDNRFTEI 183
EY+ TG +EK++ TG DL + +D +++K ++ + +
Sbjct: 205 EYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEAL 264
Query: 184 VDHIVVEDVSSIEKEQQLHASAQVTFECIKDSPADRPSMVDVAKKL 229
VD D+ K++++ QV C + SP +RP M +V + L
Sbjct: 265 VDV----DLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRML 306
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 91.3 bits (225), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 106/232 (45%), Gaps = 11/232 (4%)
Query: 4 HNHILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIVHAL 63
H H++ LIG C E IL+++ ++ G L + G+ P + + RL+I + L
Sbjct: 94 HPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMS-MSWEQRLEICIGAARGL 152
Query: 64 AYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPE-GETHITDTVMGTLGYCA 122
YLH R I+ R+ K+ IL +E V K+ DF +S E G+TH+ V GTLGY
Sbjct: 153 HYLH---TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTLGYID 209
Query: 123 PEYMRTGVFNEKSNXXXXXXXXXXXXTGWDVSDLVKDVHDLVCPFSEYLKNCFEDNRFTE 182
PEY G EKS+ S +V+ + + +E+ + + +
Sbjct: 210 PEYFIKGRLTEKSDVYSFGVVLFEVLCA--RSAIVQSLPREMVNLAEWAVESHNNGQLEQ 267
Query: 183 IVDHIVVEDVSSIEKEQQLHASAQVTFECIKDSPADRPSMVDVAKKLRQIYR 234
IVD + + + + + L +C+ S DRPSM DV KL R
Sbjct: 268 IVDPNLADKI----RPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALR 315
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 87.8 bits (216), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 105/232 (45%), Gaps = 11/232 (4%)
Query: 4 HNHILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIVHAL 63
H H++ LIG C E IL+++ ++ G L + G+ P + + RL+I + L
Sbjct: 94 HPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMS-MSWEQRLEICIGAARGL 152
Query: 64 AYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPE-GETHITDTVMGTLGYCA 122
YLH R I+ R+ K+ IL +E V K+ DF +S E +TH+ V GTLGY
Sbjct: 153 HYLH---TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLGYID 209
Query: 123 PEYMRTGVFNEKSNXXXXXXXXXXXXTGWDVSDLVKDVHDLVCPFSEYLKNCFEDNRFTE 182
PEY G EKS+ S +V+ + + +E+ + + +
Sbjct: 210 PEYFIKGRLTEKSDVYSFGVVLFEVLCA--RSAIVQSLPREMVNLAEWAVESHNNGQLEQ 267
Query: 183 IVDHIVVEDVSSIEKEQQLHASAQVTFECIKDSPADRPSMVDVAKKLRQIYR 234
IVD + + + + + L +C+ S DRPSM DV KL R
Sbjct: 268 IVDPNLADKI----RPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALR 315
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 69/136 (50%), Gaps = 4/136 (2%)
Query: 1 QMSHNHILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIV 60
++ H +I+ +G + P +V E + G+L+ R+L E L + RL +A D+
Sbjct: 90 RLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLY-RLLHKSGAR-EQLDERRRLSMAYDVA 147
Query: 61 HALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMGTLGY 120
+ YLH P PIV RN K+ +L +++ K+ DF LS + + + GT +
Sbjct: 148 KGMNYLHNRNP-PIVHRNLKSPNLLVDKKYTVKVCDFGLS-RLKASTFLSSKSAAGTPEW 205
Query: 121 CAPEYMRTGVFNEKSN 136
APE +R NEKS+
Sbjct: 206 MAPEVLRDEPSNEKSD 221
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 68/136 (50%), Gaps = 4/136 (2%)
Query: 1 QMSHNHILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIV 60
++ H +I+ +G + P +V E + G+L+ R+L E L + RL +A D+
Sbjct: 90 RLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLY-RLLHKSGAR-EQLDERRRLSMAYDVA 147
Query: 61 HALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMGTLGY 120
+ YLH P PIV R+ K+ +L +++ K+ DF LS + + GT +
Sbjct: 148 KGMNYLHNRNP-PIVHRDLKSPNLLVDKKYTVKVCDFGLS-RLKASXFLXSKXAAGTPEW 205
Query: 121 CAPEYMRTGVFNEKSN 136
APE +R NEKS+
Sbjct: 206 MAPEVLRDEPSNEKSD 221
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 104/239 (43%), Gaps = 36/239 (15%)
Query: 1 QMSHNHILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIV 60
++SH +++L G CLE LVFE +++G L D L + F L L + +D+
Sbjct: 78 KLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSD-YLRTQRGLFAAETL---LGMCLDVC 133
Query: 61 HALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMGTLGY 120
+AYL ++ R+ L E V K+ DF ++ + + + + + +
Sbjct: 134 EGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKW 190
Query: 121 CAPEYMRTGVFNEKSNXXXXXXXXXXXXTGWDVSDLVKDVHDLVCPFSEYLKNCFEDNRF 180
+PE ++ KS+ W L+ +V FSE K +E+
Sbjct: 191 ASPEVFSFSRYSSKSDV-------------WSFGVLMWEV------FSEG-KIPYENRSN 230
Query: 181 TEIVDHIVVEDVSSIEKEQQLHASA----QVTFECIKDSPADRPSMVDVAKKLRQIYRS 235
+E VVED+S+ + + ++ Q+ C K+ P DRP+ + ++L +I S
Sbjct: 231 SE-----VVEDISTGFRLYKPRLASTHVYQIMNHCWKERPEDRPAFSRLLRQLAEIAES 284
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 104/239 (43%), Gaps = 36/239 (15%)
Query: 1 QMSHNHILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIV 60
++SH +++L G CLE LVFE +++G L D L + F L L + +D+
Sbjct: 58 KLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSD-YLRTQRGLFAAETL---LGMCLDVC 113
Query: 61 HALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMGTLGY 120
+AYL ++ R+ L E V K+ DF ++ + + + + + +
Sbjct: 114 EGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKW 170
Query: 121 CAPEYMRTGVFNEKSNXXXXXXXXXXXXTGWDVSDLVKDVHDLVCPFSEYLKNCFEDNRF 180
+PE ++ KS+ W L+ +V FSE K +E+
Sbjct: 171 ASPEVFSFSRYSSKSDV-------------WSFGVLMWEV------FSEG-KIPYENRSN 210
Query: 181 TEIVDHIVVEDVSSIEKEQQLHASA----QVTFECIKDSPADRPSMVDVAKKLRQIYRS 235
+E VVED+S+ + + ++ Q+ C K+ P DRP+ + ++L +I S
Sbjct: 211 SE-----VVEDISTGFRLYKPRLASTHVYQIMNHCWKERPEDRPAFSRLLRQLAEIAES 264
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 59/122 (48%), Gaps = 12/122 (9%)
Query: 18 PIPILVFESVQYGTLWDRILGAPQPHFE-PLLLKHRLKIAMDIVHALAYLHFGFPRPIVF 76
P+P +V E V TL D + H E P+ K +++ D AL + H I+
Sbjct: 89 PLPYIVMEYVDGVTLRDIV------HTEGPMTPKRAIEVIADACQALNFSHQNG---IIH 139
Query: 77 RNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDT--VMGTLGYCAPEYMRTGVFNEK 134
R+ K + I+ + N K+ DF ++ +I + +T T V+GT Y +PE R + +
Sbjct: 140 RDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDAR 199
Query: 135 SN 136
S+
Sbjct: 200 SD 201
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 104/239 (43%), Gaps = 36/239 (15%)
Query: 1 QMSHNHILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIV 60
++SH +++L G CLE LVFE +++G L D L + F L L + +D+
Sbjct: 56 KLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSD-YLRTQRGLFAAETL---LGMCLDVC 111
Query: 61 HALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMGTLGY 120
+AYL ++ R+ L E V K+ DF ++ + + + + + +
Sbjct: 112 EGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKW 168
Query: 121 CAPEYMRTGVFNEKSNXXXXXXXXXXXXTGWDVSDLVKDVHDLVCPFSEYLKNCFEDNRF 180
+PE ++ KS+ W L+ +V FSE K +E+
Sbjct: 169 ASPEVFSFSRYSSKSDV-------------WSFGVLMWEV------FSEG-KIPYENRSN 208
Query: 181 TEIVDHIVVEDVSSIEKEQQLHASA----QVTFECIKDSPADRPSMVDVAKKLRQIYRS 235
+E VVED+S+ + + ++ Q+ C K+ P DRP+ + ++L +I S
Sbjct: 209 SE-----VVEDISTGFRLYKPRLASTHVYQIMNHCWKERPEDRPAFSRLLRQLAEIAES 262
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 59/122 (48%), Gaps = 12/122 (9%)
Query: 18 PIPILVFESVQYGTLWDRILGAPQPHFE-PLLLKHRLKIAMDIVHALAYLHFGFPRPIVF 76
P+P +V E V TL D + H E P+ K +++ D AL + H I+
Sbjct: 89 PLPYIVMEYVDGVTLRDIV------HTEGPMTPKRAIEVIADACQALNFSHQNG---IIH 139
Query: 77 RNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDT--VMGTLGYCAPEYMRTGVFNEK 134
R+ K + I+ + N K+ DF ++ +I + +T T V+GT Y +PE R + +
Sbjct: 140 RDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDAR 199
Query: 135 SN 136
S+
Sbjct: 200 SD 201
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 59/122 (48%), Gaps = 12/122 (9%)
Query: 18 PIPILVFESVQYGTLWDRILGAPQPHFE-PLLLKHRLKIAMDIVHALAYLHFGFPRPIVF 76
P+P +V E V TL D + H E P+ K +++ D AL + H I+
Sbjct: 89 PLPYIVMEYVDGVTLRDIV------HTEGPMTPKRAIEVIADACQALNFSHQNG---IIH 139
Query: 77 RNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDT--VMGTLGYCAPEYMRTGVFNEK 134
R+ K + I+ + N K+ DF ++ +I + +T T V+GT Y +PE R + +
Sbjct: 140 RDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDAR 199
Query: 135 SN 136
S+
Sbjct: 200 SD 201
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 59/122 (48%), Gaps = 12/122 (9%)
Query: 18 PIPILVFESVQYGTLWDRILGAPQPHFE-PLLLKHRLKIAMDIVHALAYLHFGFPRPIVF 76
P+P +V E V TL D + H E P+ K +++ D AL + H I+
Sbjct: 89 PLPYIVMEYVDGVTLRDIV------HTEGPMTPKRAIEVIADACQALNFSHQNG---IIH 139
Query: 77 RNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDT--VMGTLGYCAPEYMRTGVFNEK 134
R+ K + I+ + N K+ DF ++ +I + +T T V+GT Y +PE R + +
Sbjct: 140 RDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDAR 199
Query: 135 SN 136
S+
Sbjct: 200 SD 201
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 65/137 (47%), Gaps = 10/137 (7%)
Query: 2 MSHNHILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIVH 61
+ H ++++L G L P+ +V E G+L DR L Q HF LL + A+ +
Sbjct: 72 LDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDR-LRKHQGHF---LLGTLSRYAVQVAE 126
Query: 62 ALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETH--ITDTVMGTLG 119
+ YL + + R+ +L ++ K+ DF L ++P+ + H + +
Sbjct: 127 GMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFA 183
Query: 120 YCAPEYMRTGVFNEKSN 136
+CAPE ++T F+ S+
Sbjct: 184 WCAPESLKTRTFSHASD 200
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 65/137 (47%), Gaps = 10/137 (7%)
Query: 2 MSHNHILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIVH 61
+ H ++++L G L P+ +V E G+L DR L Q HF LL + A+ +
Sbjct: 72 LDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDR-LRKHQGHF---LLGTLSRYAVQVAE 126
Query: 62 ALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETH--ITDTVMGTLG 119
+ YL + + R+ +L ++ K+ DF L ++P+ + H + +
Sbjct: 127 GMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFA 183
Query: 120 YCAPEYMRTGVFNEKSN 136
+CAPE ++T F+ S+
Sbjct: 184 WCAPESLKTRTFSHASD 200
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 103/239 (43%), Gaps = 36/239 (15%)
Query: 1 QMSHNHILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIV 60
++SH +++L G CLE LVFE +++G L D L + F L L + +D+
Sbjct: 58 KLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSD-YLRTQRGLFAAETL---LGMCLDVC 113
Query: 61 HALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMGTLGY 120
+AYL ++ R+ L E V K+ DF ++ + + + + + +
Sbjct: 114 EGMAYLE---EASVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKW 170
Query: 121 CAPEYMRTGVFNEKSNXXXXXXXXXXXXTGWDVSDLVKDVHDLVCPFSEYLKNCFEDNRF 180
+PE ++ KS+ W L+ +V FSE K +E+
Sbjct: 171 ASPEVFSFSRYSSKSDV-------------WSFGVLMWEV------FSEG-KIPYENRSN 210
Query: 181 TEIVDHIVVEDVSSIEKEQQLHASA----QVTFECIKDSPADRPSMVDVAKKLRQIYRS 235
+E VVED+S+ + + ++ Q+ C K+ P DRP+ + ++L I S
Sbjct: 211 SE-----VVEDISTGFRLYKPRLASTHVYQIMNHCWKERPEDRPAFSRLLRQLAAIAAS 264
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 65/137 (47%), Gaps = 10/137 (7%)
Query: 2 MSHNHILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIVH 61
+ H ++++L G L P+ +V E G+L DR L Q HF LL + A+ +
Sbjct: 68 LDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDR-LRKHQGHF---LLGTLSRYAVQVAE 122
Query: 62 ALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETH--ITDTVMGTLG 119
+ YL + + R+ +L ++ K+ DF L ++P+ + H + +
Sbjct: 123 GMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFA 179
Query: 120 YCAPEYMRTGVFNEKSN 136
+CAPE ++T F+ S+
Sbjct: 180 WCAPESLKTRTFSHASD 196
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 59/122 (48%), Gaps = 12/122 (9%)
Query: 18 PIPILVFESVQYGTLWDRILGAPQPHFE-PLLLKHRLKIAMDIVHALAYLHFGFPRPIVF 76
P+P +V E V TL D + H E P+ K +++ D AL + H I+
Sbjct: 106 PLPYIVMEYVDGVTLRDIV------HTEGPMTPKRAIEVIADACQALNFSHQNG---IIH 156
Query: 77 RNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDT--VMGTLGYCAPEYMRTGVFNEK 134
R+ K + I+ + N K+ DF ++ +I + +T T V+GT Y +PE R + +
Sbjct: 157 RDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDAR 216
Query: 135 SN 136
S+
Sbjct: 217 SD 218
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 65/137 (47%), Gaps = 10/137 (7%)
Query: 2 MSHNHILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIVH 61
+ H ++++L G L P+ +V E G+L DR L Q HF LL + A+ +
Sbjct: 68 LDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDR-LRKHQGHF---LLGTLSRYAVQVAE 122
Query: 62 ALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETH--ITDTVMGTLG 119
+ YL + + R+ +L ++ K+ DF L ++P+ + H + +
Sbjct: 123 GMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFA 179
Query: 120 YCAPEYMRTGVFNEKSN 136
+CAPE ++T F+ S+
Sbjct: 180 WCAPESLKTRTFSHASD 196
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 64/128 (50%), Gaps = 12/128 (9%)
Query: 4 HNHILKLIGCCLETPIPILVFESVQYGTLWDRIL---GAPQPHFEPLLLKHRLKIAMDIV 60
H ++++L+G + LV+ + G+L DR+ G P PL R KIA
Sbjct: 89 HENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTP-----PLSWHMRCKIAQGAA 143
Query: 61 HALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPE-GETHITDTVMGTLG 119
+ + +LH + R+ K++ IL +E AK+ DF L+ + + +T + ++GT
Sbjct: 144 NGINFLH---ENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXSRIVGTTA 200
Query: 120 YCAPEYMR 127
Y APE +R
Sbjct: 201 YMAPEALR 208
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 65/137 (47%), Gaps = 10/137 (7%)
Query: 2 MSHNHILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIVH 61
+ H ++++L G L P+ +V E G+L DR L Q HF LL + A+ +
Sbjct: 78 LDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDR-LRKHQGHF---LLGTLSRYAVQVAE 132
Query: 62 ALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETH--ITDTVMGTLG 119
+ YL + + R+ +L ++ K+ DF L ++P+ + H + +
Sbjct: 133 GMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFA 189
Query: 120 YCAPEYMRTGVFNEKSN 136
+CAPE ++T F+ S+
Sbjct: 190 WCAPESLKTRTFSHASD 206
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 65/137 (47%), Gaps = 10/137 (7%)
Query: 2 MSHNHILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIVH 61
+ H ++++L G L P+ +V E G+L DR L Q HF LL + A+ +
Sbjct: 68 LDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDR-LRKHQGHF---LLGTLSRYAVQVAE 122
Query: 62 ALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETH--ITDTVMGTLG 119
+ YL + + R+ +L ++ K+ DF L ++P+ + H + +
Sbjct: 123 GMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFA 179
Query: 120 YCAPEYMRTGVFNEKSN 136
+CAPE ++T F+ S+
Sbjct: 180 WCAPESLKTRTFSHASD 196
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 65/137 (47%), Gaps = 10/137 (7%)
Query: 2 MSHNHILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIVH 61
+ H ++++L G L P+ +V E G+L DR L Q HF LL + A+ +
Sbjct: 78 LDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDR-LRKHQGHF---LLGTLSRYAVQVAE 132
Query: 62 ALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETH--ITDTVMGTLG 119
+ YL + + R+ +L ++ K+ DF L ++P+ + H + +
Sbjct: 133 GMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFA 189
Query: 120 YCAPEYMRTGVFNEKSN 136
+CAPE ++T F+ S+
Sbjct: 190 WCAPESLKTRTFSHASD 206
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 104/239 (43%), Gaps = 36/239 (15%)
Query: 1 QMSHNHILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIV 60
++SH +++L G CLE LVFE +++G L D L + F L L + +D+
Sbjct: 61 KLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSD-YLRTQRGLFAAETL---LGMCLDVC 116
Query: 61 HALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMGTLGY 120
+AYL ++ R+ L E V K+ DF ++ + + + + + +
Sbjct: 117 EGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKW 173
Query: 121 CAPEYMRTGVFNEKSNXXXXXXXXXXXXTGWDVSDLVKDVHDLVCPFSEYLKNCFEDNRF 180
+PE ++ KS+ W L+ +V FSE K +E+
Sbjct: 174 ASPEVFSFSRYSSKSDV-------------WSFGVLMWEV------FSEG-KIPYENRSN 213
Query: 181 TEIVDHIVVEDVSSIEKEQQLHASA----QVTFECIKDSPADRPSMVDVAKKLRQIYRS 235
+E VVED+S+ + + ++ Q+ C ++ P DRP+ + ++L +I S
Sbjct: 214 SE-----VVEDISTGFRLYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 267
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 64/128 (50%), Gaps = 12/128 (9%)
Query: 4 HNHILKLIGCCLETPIPILVFESVQYGTLWDRIL---GAPQPHFEPLLLKHRLKIAMDIV 60
H ++++L+G + LV+ + G+L DR+ G P PL R KIA
Sbjct: 89 HENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTP-----PLSWHMRCKIAQGAA 143
Query: 61 HALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPE-GETHITDTVMGTLG 119
+ + +LH + R+ K++ IL +E AK+ DF L+ + + +T + ++GT
Sbjct: 144 NGINFLH---ENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXXRIVGTTA 200
Query: 120 YCAPEYMR 127
Y APE +R
Sbjct: 201 YMAPEALR 208
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 58/122 (47%), Gaps = 12/122 (9%)
Query: 18 PIPILVFESVQYGTLWDRILGAPQPHFE-PLLLKHRLKIAMDIVHALAYLHFGFPRPIVF 76
P+P +V E V TL D + H E P+ K +++ D AL + H I+
Sbjct: 89 PLPYIVMEYVDGVTLRDIV------HTEGPMTPKRAIEVIADACQALNFSHQNG---IIH 139
Query: 77 RNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDT--VMGTLGYCAPEYMRTGVFNEK 134
R+ K + IL + N K+ DF ++ +I + + T V+GT Y +PE R + +
Sbjct: 140 RDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQARGDSVDAR 199
Query: 135 SN 136
S+
Sbjct: 200 SD 201
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/131 (36%), Positives = 68/131 (51%), Gaps = 15/131 (11%)
Query: 1 QMSHNHILKLIGCCLETPIPI-LVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDI 59
++SH +I+KL ETP I LV E V G L+DRI+ + ++ +K I
Sbjct: 104 RLSHPNIIKL-KEIFETPTEISLVLELVTGGELFDRIV--EKGYYSERDAADAVK---QI 157
Query: 60 VHALAYLHFGFPRPIVFRNFKTSCILFNE---ENVAKLFDFSLSISIPEGETHITDTVMG 116
+ A+AYLH IV R+ K +L+ + K+ DF LS I E + + TV G
Sbjct: 158 LEAVAYLH---ENGIVHRDLKPENLLYATPAPDAPLKIADFGLS-KIVEHQV-LMKTVCG 212
Query: 117 TLGYCAPEYMR 127
T GYCAPE +R
Sbjct: 213 TPGYCAPEILR 223
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 69/145 (47%), Gaps = 21/145 (14%)
Query: 2 MSHNHILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIVH 61
+ H +I+ L G CL+ P LV E + G L +R+L + P +L + A+ I
Sbjct: 63 LKHPNIIALRGVCLKEPNLCLVMEFARGGPL-NRVLSGKR--IPPDIL---VNWAVQIAR 116
Query: 62 ALAYLHFGFPRPIVFRNFKTSCILFNEE--------NVAKLFDFSLSISIPEGETHITD- 112
+ YLH PI+ R+ K+S IL ++ + K+ DF L+ E H T
Sbjct: 117 GMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLA-----REWHRTTK 171
Query: 113 -TVMGTLGYCAPEYMRTGVFNEKSN 136
+ G + APE +R +F++ S+
Sbjct: 172 MSAAGAYAWMAPEVIRASMFSKGSD 196
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 59/134 (44%), Gaps = 15/134 (11%)
Query: 2 MSHNHILKLIGCCLETPIPILVFESVQYGTLWDRI---LGAPQPHFEPLLLKHRLKIAMD 58
++H +++K G E I L E G L+DRI +G P+P + H+L +
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF--HQLMAGVV 118
Query: 59 IVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIP-EGETHITDTVMGT 117
+H + H R+ K +L +E + K+ DF L+ + + + GT
Sbjct: 119 YLHGIGITH---------RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGT 169
Query: 118 LGYCAPEYMRTGVF 131
L Y APE ++ F
Sbjct: 170 LPYVAPELLKRREF 183
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 59/134 (44%), Gaps = 15/134 (11%)
Query: 2 MSHNHILKLIGCCLETPIPILVFESVQYGTLWDRI---LGAPQPHFEPLLLKHRLKIAMD 58
++H +++K G E I L E G L+DRI +G P+P + H+L +
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF--HQLMAGVV 118
Query: 59 IVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIP-EGETHITDTVMGT 117
+H + H R+ K +L +E + K+ DF L+ + + + GT
Sbjct: 119 YLHGIGITH---------RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGT 169
Query: 118 LGYCAPEYMRTGVF 131
L Y APE ++ F
Sbjct: 170 LPYVAPELLKRREF 183
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 68/137 (49%), Gaps = 11/137 (8%)
Query: 1 QMSHNHILKLIGCCLETPIPI-LVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDI 59
Q+ H+++++L+G +E + +V E + G+L D + + L LK ++D+
Sbjct: 61 QLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCL---LKFSLDV 117
Query: 60 VHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMGTLG 119
A+ YL V R+ +L +E+NVAK+ DF L+ + + DT +
Sbjct: 118 CEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLT----KEASSTQDTGKLPVK 170
Query: 120 YCAPEYMRTGVFNEKSN 136
+ APE +R F+ KS+
Sbjct: 171 WTAPEALREAAFSTKSD 187
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 59/134 (44%), Gaps = 15/134 (11%)
Query: 2 MSHNHILKLIGCCLETPIPILVFESVQYGTLWDRI---LGAPQPHFEPLLLKHRLKIAMD 58
++H +++K G E I L E G L+DRI +G P+P + H+L +
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF--HQLMAGVV 118
Query: 59 IVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIP-EGETHITDTVMGT 117
+H + H R+ K +L +E + K+ DF L+ + + + GT
Sbjct: 119 YLHGIGITH---------RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGT 169
Query: 118 LGYCAPEYMRTGVF 131
L Y APE ++ F
Sbjct: 170 LPYVAPELLKRREF 183
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 59/134 (44%), Gaps = 15/134 (11%)
Query: 2 MSHNHILKLIGCCLETPIPILVFESVQYGTLWDRI---LGAPQPHFEPLLLKHRLKIAMD 58
++H +++K G E I L E G L+DRI +G P+P + H+L +
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF--HQLMAGVV 119
Query: 59 IVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIP-EGETHITDTVMGT 117
+H + H R+ K +L +E + K+ DF L+ + + + GT
Sbjct: 120 YLHGIGITH---------RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGT 170
Query: 118 LGYCAPEYMRTGVF 131
L Y APE ++ F
Sbjct: 171 LPYVAPELLKRREF 184
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 63/128 (49%), Gaps = 12/128 (9%)
Query: 4 HNHILKLIGCCLETPIPILVFESVQYGTLWDRIL---GAPQPHFEPLLLKHRLKIAMDIV 60
H ++++L+G + LV+ + G+L DR+ G P PL R KIA
Sbjct: 83 HENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTP-----PLSWHMRCKIAQGAA 137
Query: 61 HALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPE-GETHITDTVMGTLG 119
+ + +LH + R+ K++ IL +E AK+ DF L+ + + + + ++GT
Sbjct: 138 NGINFLH---ENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVMXXRIVGTTA 194
Query: 120 YCAPEYMR 127
Y APE +R
Sbjct: 195 YMAPEALR 202
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 59/134 (44%), Gaps = 15/134 (11%)
Query: 2 MSHNHILKLIGCCLETPIPILVFESVQYGTLWDRI---LGAPQPHFEPLLLKHRLKIAMD 58
++H +++K G E I L E G L+DRI +G P+P + H+L +
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF--HQLMAGVV 118
Query: 59 IVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIP-EGETHITDTVMGT 117
+H + H R+ K +L +E + K+ DF L+ + + + GT
Sbjct: 119 YLHGIGITH---------RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGT 169
Query: 118 LGYCAPEYMRTGVF 131
L Y APE ++ F
Sbjct: 170 LPYVAPELLKRREF 183
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 62/128 (48%), Gaps = 12/128 (9%)
Query: 4 HNHILKLIGCCLETPIPILVFESVQYGTLWDRIL---GAPQPHFEPLLLKHRLKIAMDIV 60
H ++++L+G + LV+ G+L DR+ G P PL R KIA
Sbjct: 80 HENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTP-----PLSWHXRCKIAQGAA 134
Query: 61 HALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDT-VMGTLG 119
+ + +LH + R+ K++ IL +E AK+ DF L+ + + + + ++GT
Sbjct: 135 NGINFLH---ENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVXXSRIVGTTA 191
Query: 120 YCAPEYMR 127
Y APE +R
Sbjct: 192 YXAPEALR 199
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 47.0 bits (110), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 59/134 (44%), Gaps = 15/134 (11%)
Query: 2 MSHNHILKLIGCCLETPIPILVFESVQYGTLWDRI---LGAPQPHFEPLLLKHRLKIAMD 58
++H +++K G E I L E G L+DRI +G P+P + H+L +
Sbjct: 60 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF--HQLMAGVV 117
Query: 59 IVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIP-EGETHITDTVMGT 117
+H + H R+ K +L +E + K+ DF L+ + + + GT
Sbjct: 118 YLHGIGITH---------RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 168
Query: 118 LGYCAPEYMRTGVF 131
L Y APE ++ F
Sbjct: 169 LPYVAPELLKRREF 182
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 47.0 bits (110), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 59/134 (44%), Gaps = 15/134 (11%)
Query: 2 MSHNHILKLIGCCLETPIPILVFESVQYGTLWDRI---LGAPQPHFEPLLLKHRLKIAMD 58
++H +++K G E I L E G L+DRI +G P+P + H+L +
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF--HQLMAGVV 118
Query: 59 IVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIP-EGETHITDTVMGT 117
+H + H R+ K +L +E + K+ DF L+ + + + GT
Sbjct: 119 YLHGIGITH---------RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 169
Query: 118 LGYCAPEYMRTGVF 131
L Y APE ++ F
Sbjct: 170 LPYVAPELLKRREF 183
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 47.0 bits (110), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 59/134 (44%), Gaps = 15/134 (11%)
Query: 2 MSHNHILKLIGCCLETPIPILVFESVQYGTLWDRI---LGAPQPHFEPLLLKHRLKIAMD 58
++H +++K G E I L E G L+DRI +G P+P + H+L +
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF--HQLMAGVV 118
Query: 59 IVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIP-EGETHITDTVMGT 117
+H + H R+ K +L +E + K+ DF L+ + + + GT
Sbjct: 119 YLHGIGITH---------RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 169
Query: 118 LGYCAPEYMRTGVF 131
L Y APE ++ F
Sbjct: 170 LPYVAPELLKRREF 183
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 47.0 bits (110), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 59/134 (44%), Gaps = 15/134 (11%)
Query: 2 MSHNHILKLIGCCLETPIPILVFESVQYGTLWDRI---LGAPQPHFEPLLLKHRLKIAMD 58
++H +++K G E I L E G L+DRI +G P+P + H+L +
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF--HQLMAGVV 118
Query: 59 IVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIP-EGETHITDTVMGT 117
+H + H R+ K +L +E + K+ DF L+ + + + GT
Sbjct: 119 YLHGIGITH---------RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 169
Query: 118 LGYCAPEYMRTGVF 131
L Y APE ++ F
Sbjct: 170 LPYVAPELLKRREF 183
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 47.0 bits (110), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 59/134 (44%), Gaps = 15/134 (11%)
Query: 2 MSHNHILKLIGCCLETPIPILVFESVQYGTLWDRI---LGAPQPHFEPLLLKHRLKIAMD 58
++H +++K G E I L E G L+DRI +G P+P + H+L +
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF--HQLMAGVV 118
Query: 59 IVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIP-EGETHITDTVMGT 117
+H + H R+ K +L +E + K+ DF L+ + + + GT
Sbjct: 119 YLHGIGITH---------RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 169
Query: 118 LGYCAPEYMRTGVF 131
L Y APE ++ F
Sbjct: 170 LPYVAPELLKRREF 183
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 59/134 (44%), Gaps = 15/134 (11%)
Query: 2 MSHNHILKLIGCCLETPIPILVFESVQYGTLWDRI---LGAPQPHFEPLLLKHRLKIAMD 58
++H +++K G E I L E G L+DRI +G P+P + H+L +
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF--HQLMAGVV 118
Query: 59 IVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIP-EGETHITDTVMGT 117
+H + H R+ K +L +E + K+ DF L+ + + + GT
Sbjct: 119 YLHGIGITH---------RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 169
Query: 118 LGYCAPEYMRTGVF 131
L Y APE ++ F
Sbjct: 170 LPYVAPELLKRREF 183
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 59/134 (44%), Gaps = 15/134 (11%)
Query: 2 MSHNHILKLIGCCLETPIPILVFESVQYGTLWDRI---LGAPQPHFEPLLLKHRLKIAMD 58
++H +++K G E I L E G L+DRI +G P+P + H+L +
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF--HQLMAGVV 118
Query: 59 IVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIP-EGETHITDTVMGT 117
+H + H R+ K +L +E + K+ DF L+ + + + GT
Sbjct: 119 YLHGIGITH---------RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 169
Query: 118 LGYCAPEYMRTGVF 131
L Y APE ++ F
Sbjct: 170 LPYVAPELLKRREF 183
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 103/239 (43%), Gaps = 36/239 (15%)
Query: 1 QMSHNHILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIV 60
++SH +++L G CLE LV E +++G L D L + F L L + +D+
Sbjct: 59 KLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSD-YLRTQRGLFAAETL---LGMCLDVC 114
Query: 61 HALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMGTLGY 120
+AYL ++ R+ L E V K+ DF ++ + + + + + +
Sbjct: 115 EGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKW 171
Query: 121 CAPEYMRTGVFNEKSNXXXXXXXXXXXXTGWDVSDLVKDVHDLVCPFSEYLKNCFEDNRF 180
+PE ++ KS+ W L+ +V FSE K +E+
Sbjct: 172 ASPEVFSFSRYSSKSDV-------------WSFGVLMWEV------FSEG-KIPYENRSN 211
Query: 181 TEIVDHIVVEDVSSIEKEQQLHASA----QVTFECIKDSPADRPSMVDVAKKLRQIYRS 235
+E VVED+S+ + + ++ Q+ C ++ P DRP+ + ++L +I S
Sbjct: 212 SE-----VVEDISTGFRLYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 265
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 59/134 (44%), Gaps = 15/134 (11%)
Query: 2 MSHNHILKLIGCCLETPIPILVFESVQYGTLWDRI---LGAPQPHFEPLLLKHRLKIAMD 58
++H +++K G E I L E G L+DRI +G P+P + H+L +
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF--HQLMAGVV 119
Query: 59 IVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIP-EGETHITDTVMGT 117
+H + H R+ K +L +E + K+ DF L+ + + + GT
Sbjct: 120 YLHGIGITH---------RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 170
Query: 118 LGYCAPEYMRTGVF 131
L Y APE ++ F
Sbjct: 171 LPYVAPELLKRREF 184
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 59/134 (44%), Gaps = 15/134 (11%)
Query: 2 MSHNHILKLIGCCLETPIPILVFESVQYGTLWDRI---LGAPQPHFEPLLLKHRLKIAMD 58
++H +++K G E I L E G L+DRI +G P+P + H+L +
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF--HQLMAGVV 118
Query: 59 IVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIP-EGETHITDTVMGT 117
+H + H R+ K +L +E + K+ DF L+ + + + GT
Sbjct: 119 YLHGIGITH---------RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 169
Query: 118 LGYCAPEYMRTGVF 131
L Y APE ++ F
Sbjct: 170 LPYVAPELLKRREF 183
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 62/133 (46%), Gaps = 8/133 (6%)
Query: 1 QMSHNHILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIV 60
Q+SH +I+ +I E LV E ++ TL + I + H PL + + I+
Sbjct: 67 QLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYI----ESHG-PLSVDTAINFTNQIL 121
Query: 61 HALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMGTLGY 120
+ + H IV R+ K IL + K+FDF ++ ++ E T+ V+GT+ Y
Sbjct: 122 DGIKHAH---DMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQY 178
Query: 121 CAPEYMRTGVFNE 133
+PE + +E
Sbjct: 179 FSPEQAKGEATDE 191
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 59/134 (44%), Gaps = 15/134 (11%)
Query: 2 MSHNHILKLIGCCLETPIPILVFESVQYGTLWDRI---LGAPQPHFEPLLLKHRLKIAMD 58
++H +++K G E I L E G L+DRI +G P+P + H+L +
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF--HQLMAGVV 118
Query: 59 IVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIP-EGETHITDTVMGT 117
+H + H R+ K +L +E + K+ DF L+ + + + GT
Sbjct: 119 YLHGIGITH---------RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 169
Query: 118 LGYCAPEYMRTGVF 131
L Y APE ++ F
Sbjct: 170 LPYVAPELLKRREF 183
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 59/134 (44%), Gaps = 15/134 (11%)
Query: 2 MSHNHILKLIGCCLETPIPILVFESVQYGTLWDRI---LGAPQPHFEPLLLKHRLKIAMD 58
++H +++K G E I L E G L+DRI +G P+P + H+L +
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF--HQLMAGVV 119
Query: 59 IVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIP-EGETHITDTVMGT 117
+H + H R+ K +L +E + K+ DF L+ + + + GT
Sbjct: 120 YLHGIGITH---------RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 170
Query: 118 LGYCAPEYMRTGVF 131
L Y APE ++ F
Sbjct: 171 LPYVAPELLKRREF 184
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 59/134 (44%), Gaps = 15/134 (11%)
Query: 2 MSHNHILKLIGCCLETPIPILVFESVQYGTLWDRI---LGAPQPHFEPLLLKHRLKIAMD 58
++H +++K G E I L E G L+DRI +G P+P + H+L +
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF--HQLMAGVV 119
Query: 59 IVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIP-EGETHITDTVMGT 117
+H + H R+ K +L +E + K+ DF L+ + + + GT
Sbjct: 120 YLHGIGITH---------RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 170
Query: 118 LGYCAPEYMRTGVF 131
L Y APE ++ F
Sbjct: 171 LPYVAPELLKRREF 184
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 52/110 (47%), Gaps = 11/110 (10%)
Query: 2 MSHNHILKLIGCCLETPIPIL--VFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDI 59
+ H HI+K GCC + L V E V G+L D + P+ + L L A I
Sbjct: 73 LYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYL---PR---HSIGLAQLLLFAQQI 126
Query: 60 VHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETH 109
+AYLH + + RN +L + + + K+ DF L+ ++PEG +
Sbjct: 127 CEGMAYLH---AQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEY 173
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 59/134 (44%), Gaps = 15/134 (11%)
Query: 2 MSHNHILKLIGCCLETPIPILVFESVQYGTLWDRI---LGAPQPHFEPLLLKHRLKIAMD 58
++H +++K G E I L E G L+DRI +G P+P + H+L +
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF--HQLMAGVV 119
Query: 59 IVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIP-EGETHITDTVMGT 117
+H + H R+ K +L +E + K+ DF L+ + + + GT
Sbjct: 120 YLHGIGITH---------RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 170
Query: 118 LGYCAPEYMRTGVF 131
L Y APE ++ F
Sbjct: 171 LPYVAPELLKRREF 184
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 59/134 (44%), Gaps = 15/134 (11%)
Query: 2 MSHNHILKLIGCCLETPIPILVFESVQYGTLWDRI---LGAPQPHFEPLLLKHRLKIAMD 58
++H +++K G E I L E G L+DRI +G P+P + H+L +
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF--HQLMAGVV 119
Query: 59 IVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIP-EGETHITDTVMGT 117
+H + H R+ K +L +E + K+ DF L+ + + + GT
Sbjct: 120 YLHGIGITH---------RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 170
Query: 118 LGYCAPEYMRTGVF 131
L Y APE ++ F
Sbjct: 171 LPYVAPELLKRREF 184
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 59/134 (44%), Gaps = 15/134 (11%)
Query: 2 MSHNHILKLIGCCLETPIPILVFESVQYGTLWDRI---LGAPQPHFEPLLLKHRLKIAMD 58
++H +++K G E I L E G L+DRI +G P+P + H+L +
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF--HQLMAGVV 119
Query: 59 IVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIP-EGETHITDTVMGT 117
+H + H R+ K +L +E + K+ DF L+ + + + GT
Sbjct: 120 YLHGIGITH---------RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 170
Query: 118 LGYCAPEYMRTGVF 131
L Y APE ++ F
Sbjct: 171 LPYVAPELLKRREF 184
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 59/134 (44%), Gaps = 15/134 (11%)
Query: 2 MSHNHILKLIGCCLETPIPILVFESVQYGTLWDRI---LGAPQPHFEPLLLKHRLKIAMD 58
++H +++K G E I L E G L+DRI +G P+P + H+L +
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF--HQLMAGVV 119
Query: 59 IVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIP-EGETHITDTVMGT 117
+H + H R+ K +L +E + K+ DF L+ + + + GT
Sbjct: 120 YLHGIGITH---------RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 170
Query: 118 LGYCAPEYMRTGVF 131
L Y APE ++ F
Sbjct: 171 LPYVAPELLKRREF 184
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 52/110 (47%), Gaps = 11/110 (10%)
Query: 2 MSHNHILKLIGCCLETPIPIL--VFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDI 59
+ H HI+K GCC + L V E V G+L D + P+ + L L A I
Sbjct: 73 LYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYL---PR---HSIGLAQLLLFAQQI 126
Query: 60 VHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETH 109
+AYLH + + RN +L + + + K+ DF L+ ++PEG +
Sbjct: 127 CEGMAYLH---SQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEY 173
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 68/137 (49%), Gaps = 11/137 (8%)
Query: 1 QMSHNHILKLIGCCLETPIPI-LVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDI 59
Q+ H+++++L+G +E + +V E + G+L D + + L LK ++D+
Sbjct: 70 QLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCL---LKFSLDV 126
Query: 60 VHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMGTLG 119
A+ YL V R+ +L +E+NVAK+ DF L+ + + DT +
Sbjct: 127 CEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLT----KEASSTQDTGKLPVK 179
Query: 120 YCAPEYMRTGVFNEKSN 136
+ APE +R F+ KS+
Sbjct: 180 WTAPEALREKKFSTKSD 196
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 68/137 (49%), Gaps = 11/137 (8%)
Query: 1 QMSHNHILKLIGCCLETPIPI-LVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDI 59
Q+ H+++++L+G +E + +V E + G+L D + + L LK ++D+
Sbjct: 55 QLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCL---LKFSLDV 111
Query: 60 VHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMGTLG 119
A+ YL V R+ +L +E+NVAK+ DF L+ + + DT +
Sbjct: 112 CEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLT----KEASSTQDTGKLPVK 164
Query: 120 YCAPEYMRTGVFNEKSN 136
+ APE +R F+ KS+
Sbjct: 165 WTAPEALREKKFSTKSD 181
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 51/107 (47%), Gaps = 11/107 (10%)
Query: 2 MSHNHILKLIGCCLETPIPIL--VFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDI 59
+ H HI+K GCC + L V E V G+L D + P+ + L L A I
Sbjct: 90 LYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYL---PR---HSIGLAQLLLFAQQI 143
Query: 60 VHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEG 106
+AYLH + + R+ +L + + + K+ DF L+ ++PEG
Sbjct: 144 CEGMAYLH---AQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEG 187
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 68/137 (49%), Gaps = 11/137 (8%)
Query: 1 QMSHNHILKLIGCCLETPIPI-LVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDI 59
Q+ H+++++L+G +E + +V E + G+L D + + L LK ++D+
Sbjct: 242 QLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCL---LKFSLDV 298
Query: 60 VHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMGTLG 119
A+ YL V R+ +L +E+NVAK+ DF L+ + + DT +
Sbjct: 299 CEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLT----KEASSTQDTGKLPVK 351
Query: 120 YCAPEYMRTGVFNEKSN 136
+ APE +R F+ KS+
Sbjct: 352 WTAPEALREKKFSTKSD 368
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 62/136 (45%), Gaps = 7/136 (5%)
Query: 1 QMSHNHILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIV 60
Q+ H +++L + PI I+ E ++ G+L D + P L + L +A I
Sbjct: 60 QLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIA 115
Query: 61 HALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMGTLGY 120
+A++ R + RN + + IL ++ K+ DF L+ I + E + + +
Sbjct: 116 EGMAFIE---ERNYIHRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKW 172
Query: 121 CAPEYMRTGVFNEKSN 136
APE + G F KS+
Sbjct: 173 TAPEAINYGTFTIKSD 188
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 43.9 bits (102), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 62/136 (45%), Gaps = 7/136 (5%)
Query: 1 QMSHNHILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIV 60
Q+ H +++L + PI I+ E ++ G+L D + P L + L +A I
Sbjct: 64 QLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIA 119
Query: 61 HALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMGTLGY 120
+A++ R + R+ + + IL ++ K+ DF L+ I + E + + +
Sbjct: 120 EGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKW 176
Query: 121 CAPEYMRTGVFNEKSN 136
APE + G F KS+
Sbjct: 177 TAPEAINYGTFTIKSD 192
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 43.9 bits (102), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 103/243 (42%), Gaps = 23/243 (9%)
Query: 2 MSHNHILKLIGCCLETPIP--ILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDI 59
+ H++I+K G C L+ E + YG+L D + Q H E + L+ I
Sbjct: 69 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL----QKHKERIDHIKLLQYTSQI 124
Query: 60 VHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETH--ITDTVMGT 117
+ YL G R + RN T IL EN K+ DF L+ +P+ + + + +
Sbjct: 125 CKGMEYL--GTKR-YIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESP 181
Query: 118 LGYCAPEYMRTGVFNEKSNXXXXXXXXXXXXTGWDVSDLVKDVHDLVCPFSEYLKNCFED 177
+ + APE + F+ S+ G + +L + P +E+++ D
Sbjct: 182 IFWYAPESLTESKFSVASDVWSF---------GVVLYELFTYIEKSKSPPAEFMRMIGND 232
Query: 178 NRFTEIVDHIV--VEDVSSIEKEQQLHASA-QVTFECIKDSPADRPSMVDVAKKLRQIYR 234
+ IV H++ +++ + + + EC ++ RPS D+A ++ QI
Sbjct: 233 KQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD 292
Query: 235 SLS 237
+++
Sbjct: 293 NMA 295
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 43.9 bits (102), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 56/125 (44%), Gaps = 10/125 (8%)
Query: 3 SHNHILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIVHA 62
H HI+ LI + LVF+ ++ G L+D + L K I ++ A
Sbjct: 158 GHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKV-----ALSEKETRSIMRSLLEA 212
Query: 63 LAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMGTLGYCA 122
+++LH IV R+ K IL ++ +L DF S + GE + GT GY A
Sbjct: 213 VSFLH---ANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEK--LRELCGTPGYLA 267
Query: 123 PEYMR 127
PE ++
Sbjct: 268 PEILK 272
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 43.9 bits (102), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 62/136 (45%), Gaps = 7/136 (5%)
Query: 1 QMSHNHILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIV 60
Q+ H +++L + PI I+ E ++ G+L D + P L + L +A I
Sbjct: 64 QLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIA 119
Query: 61 HALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMGTLGY 120
+A++ R + R+ + + IL ++ K+ DF L+ I + E + + +
Sbjct: 120 EGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKW 176
Query: 121 CAPEYMRTGVFNEKSN 136
APE + G F KS+
Sbjct: 177 TAPEAINYGTFTIKSD 192
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 43.9 bits (102), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 62/136 (45%), Gaps = 7/136 (5%)
Query: 1 QMSHNHILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIV 60
Q+ H +++L + PI I+ E ++ G+L D + P L + L +A I
Sbjct: 65 QLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIA 120
Query: 61 HALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMGTLGY 120
+A++ R + R+ + + IL ++ K+ DF L+ I + E + + +
Sbjct: 121 EGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKW 177
Query: 121 CAPEYMRTGVFNEKSN 136
APE + G F KS+
Sbjct: 178 TAPEAINYGTFTIKSD 193
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 43.9 bits (102), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 52/110 (47%), Gaps = 11/110 (10%)
Query: 2 MSHNHILKLIGCCLETPIPI--LVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDI 59
+ H HI+K GCC + LV E V G+L D + + LL ++ M
Sbjct: 67 LYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLLLFAQQICEGMAY 126
Query: 60 VHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETH 109
+HA Y+H R + RN +L + + + K+ DF L+ ++PEG +
Sbjct: 127 LHAQHYIH----RALAARN-----VLLDNDRLVKIGDFGLAKAVPEGHEY 167
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 43.9 bits (102), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 52/110 (47%), Gaps = 11/110 (10%)
Query: 2 MSHNHILKLIGCCLETPIPI--LVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDI 59
+ H HI+K GCC + LV E V G+L D + + LL ++ M
Sbjct: 68 LYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLLLFAQQICEGMAY 127
Query: 60 VHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETH 109
+HA Y+H R + RN +L + + + K+ DF L+ ++PEG +
Sbjct: 128 LHAQHYIH----RALAARN-----VLLDNDRLVKIGDFGLAKAVPEGHEY 168
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 43.9 bits (102), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 62/136 (45%), Gaps = 7/136 (5%)
Query: 1 QMSHNHILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIV 60
Q+ H +++L + PI I+ E ++ G+L D + P L + L +A I
Sbjct: 66 QLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIA 121
Query: 61 HALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMGTLGY 120
+A++ R + R+ + + IL ++ K+ DF L+ I + E + + +
Sbjct: 122 EGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKW 178
Query: 121 CAPEYMRTGVFNEKSN 136
APE + G F KS+
Sbjct: 179 TAPEAINYGTFTIKSD 194
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 43.5 bits (101), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 62/136 (45%), Gaps = 7/136 (5%)
Query: 1 QMSHNHILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIV 60
Q+ H +++L + PI I+ E ++ G+L D + P L + L +A I
Sbjct: 64 QLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIA 119
Query: 61 HALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMGTLGY 120
+A++ R + R+ + + IL ++ K+ DF L+ I + E + + +
Sbjct: 120 EGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKW 176
Query: 121 CAPEYMRTGVFNEKSN 136
APE + G F KS+
Sbjct: 177 TAPEAINYGTFTIKSD 192
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 62/136 (45%), Gaps = 7/136 (5%)
Query: 1 QMSHNHILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIV 60
Q+ H +++L + PI I+ E ++ G+L D + P L + L +A I
Sbjct: 72 QLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIA 127
Query: 61 HALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMGTLGY 120
+A++ R + R+ + + IL ++ K+ DF L+ I + E + + +
Sbjct: 128 EGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKW 184
Query: 121 CAPEYMRTGVFNEKSN 136
APE + G F KS+
Sbjct: 185 TAPEAINYGTFTIKSD 200
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 62/136 (45%), Gaps = 7/136 (5%)
Query: 1 QMSHNHILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIV 60
Q+ H +++L + PI I+ E ++ G+L D + P L + L +A I
Sbjct: 59 QLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIA 114
Query: 61 HALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMGTLGY 120
+A++ R + R+ + + IL ++ K+ DF L+ I + E + + +
Sbjct: 115 EGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKW 171
Query: 121 CAPEYMRTGVFNEKSN 136
APE + G F KS+
Sbjct: 172 TAPEAINYGTFTIKSD 187
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 62/136 (45%), Gaps = 7/136 (5%)
Query: 1 QMSHNHILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIV 60
Q+ H +++L + PI I+ E ++ G+L D + P L + L +A I
Sbjct: 64 QLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIA 119
Query: 61 HALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMGTLGY 120
+A++ R + R+ + + IL ++ K+ DF L+ I + E + + +
Sbjct: 120 EGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKW 176
Query: 121 CAPEYMRTGVFNEKSN 136
APE + G F KS+
Sbjct: 177 TAPEAINYGTFTIKSD 192
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 62/136 (45%), Gaps = 7/136 (5%)
Query: 1 QMSHNHILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIV 60
Q+ H +++L + PI I+ E ++ G+L D + P L + L +A I
Sbjct: 70 QLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIA 125
Query: 61 HALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMGTLGY 120
+A++ R + R+ + + IL ++ K+ DF L+ I + E + + +
Sbjct: 126 EGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKW 182
Query: 121 CAPEYMRTGVFNEKSN 136
APE + G F KS+
Sbjct: 183 TAPEAINYGTFTIKSD 198
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 62/136 (45%), Gaps = 7/136 (5%)
Query: 1 QMSHNHILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIV 60
Q+ H +++L + PI I+ E ++ G+L D + P L + L +A I
Sbjct: 69 QLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIA 124
Query: 61 HALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMGTLGY 120
+A++ R + R+ + + IL ++ K+ DF L+ I + E + + +
Sbjct: 125 EGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKW 181
Query: 121 CAPEYMRTGVFNEKSN 136
APE + G F KS+
Sbjct: 182 TAPEAINYGTFTIKSD 197
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 62/136 (45%), Gaps = 7/136 (5%)
Query: 1 QMSHNHILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIV 60
Q+ H +++L + PI I+ E ++ G+L D + P L + L +A I
Sbjct: 70 QLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIA 125
Query: 61 HALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMGTLGY 120
+A++ R + R+ + + IL ++ K+ DF L+ I + E + + +
Sbjct: 126 EGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKW 182
Query: 121 CAPEYMRTGVFNEKSN 136
APE + G F KS+
Sbjct: 183 TAPEAINYGTFTIKSD 198
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 62/136 (45%), Gaps = 7/136 (5%)
Query: 1 QMSHNHILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIV 60
Q+ H +++L + PI I+ E ++ G+L D + P L + L +A I
Sbjct: 73 QLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIA 128
Query: 61 HALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMGTLGY 120
+A++ R + R+ + + IL ++ K+ DF L+ I + E + + +
Sbjct: 129 EGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKW 185
Query: 121 CAPEYMRTGVFNEKSN 136
APE + G F KS+
Sbjct: 186 TAPEAINYGTFTIKSD 201
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 59/131 (45%), Gaps = 10/131 (7%)
Query: 2 MSHNHILKLIGCCLETPIPI-LVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIV 60
+ H HI +L LET I +V E G L+D I+ + E + R IV
Sbjct: 65 LRHQHICQLYHV-LETANKIFMVLEYCPGGELFDYIISQDRLSEEETRVVFR-----QIV 118
Query: 61 HALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMGTLGY 120
A+AY+H + R+ K +LF+E + KL DF L + + T G+L Y
Sbjct: 119 SAVAYVH---SQGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQTCCGSLAY 175
Query: 121 CAPEYMRTGVF 131
APE ++ +
Sbjct: 176 AAPELIQGKSY 186
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 62/136 (45%), Gaps = 7/136 (5%)
Query: 1 QMSHNHILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIV 60
Q+ H +++L + PI I+ E ++ G+L D + P L + L +A I
Sbjct: 74 QLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIA 129
Query: 61 HALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMGTLGY 120
+A++ R + R+ + + IL ++ K+ DF L+ I + E + + +
Sbjct: 130 EGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKW 186
Query: 121 CAPEYMRTGVFNEKSN 136
APE + G F KS+
Sbjct: 187 TAPEAINYGTFTIKSD 202
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/235 (21%), Positives = 98/235 (41%), Gaps = 31/235 (13%)
Query: 1 QMSHNHILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIV 60
++ H ++++L+G C P +V E + YG L D + + ++L L +A I
Sbjct: 84 EIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVL---LYMATQIS 140
Query: 61 HALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMG-TLG 119
A+ YL + + R+ L E +V K+ DF LS + G+T+ +
Sbjct: 141 SAMEYLE---KKNFIHRDLAARNCLVGENHVVKVADFGLS-RLMTGDTYTAHAGAKFPIK 196
Query: 120 YCAPEYMRTGVFNEKSNXXXXXXXXXXXXTGWDVSDLVKDVHDLVCPFSEYLKNCFEDNR 179
+ APE + F+ KS+ W L+ ++ + Y + +
Sbjct: 197 WTAPESLAYNTFSIKSDV-------------WAFGVLLWEI-------ATYGMSPYPGID 236
Query: 180 FTEIVDHIVVEDVSSIEKEQQLHASA-QVTFECIKDSPADRPSMVDVAKKLRQIY 233
+++ D ++E +E+ + ++ C K SPADRPS + + ++
Sbjct: 237 LSQVYD--LLEKGYRMEQPEGCPPKVYELMRACWKWSPADRPSFAETHQAFETMF 289
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 62/139 (44%), Gaps = 12/139 (8%)
Query: 1 QMSHNHILKLIGCCLETPIPILVFESVQYGTLWD--RILGAPQPHFEPLLLKHRLKIAMD 58
Q SH +I++LIG C + +V E VQ G R GA L +K L++ D
Sbjct: 168 QYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGA------RLRVKTLLQMVGD 221
Query: 59 IVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMGT- 117
+ YL + + R+ L E+NV K+ DF +S +G + +
Sbjct: 222 AAAGMEYLE---SKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVP 278
Query: 118 LGYCAPEYMRTGVFNEKSN 136
+ + APE + G ++ +S+
Sbjct: 279 VKWTAPEALNYGRYSSESD 297
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 51/116 (43%), Gaps = 21/116 (18%)
Query: 2 MSHNHILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFE-----------PLLLK 50
+ H HI++ G C E ++VFE +++G L +R L + P + PL L
Sbjct: 100 LQHQHIVRFFGVCTEGRPLLMVFEYMRHGDL-NRFLRSHGPDAKLLAGGEDVAPGPLGLG 158
Query: 51 HRLKIAMDIVHALAY---LHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISI 103
L +A + + Y LHF V R+ T L + V K+ DF +S I
Sbjct: 159 QLLAVASQVAAGMVYLAGLHF------VHRDLATRNCLVGQGLVVKIGDFGMSRDI 208
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 51/116 (43%), Gaps = 21/116 (18%)
Query: 2 MSHNHILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFE-----------PLLLK 50
+ H HI++ G C E ++VFE +++G L +R L + P + PL L
Sbjct: 71 LQHQHIVRFFGVCTEGRPLLMVFEYMRHGDL-NRFLRSHGPDAKLLAGGEDVAPGPLGLG 129
Query: 51 HRLKIAMDIVHALAY---LHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISI 103
L +A + + Y LHF V R+ T L + V K+ DF +S I
Sbjct: 130 QLLAVASQVAAGMVYLAGLHF------VHRDLATRNCLVGQGLVVKIGDFGMSRDI 179
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 6/80 (7%)
Query: 56 AMDIVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVM 115
A +I+ L ++H F +V+R+ K + IL +E ++ D L+ + + H + +
Sbjct: 298 AAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS---V 351
Query: 116 GTLGYCAPEYMRTGVFNEKS 135
GT GY APE ++ GV + S
Sbjct: 352 GTHGYMAPEVLQKGVAYDSS 371
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 6/80 (7%)
Query: 56 AMDIVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVM 115
A +I+ L ++H F +V+R+ K + IL +E ++ D L+ + + H + +
Sbjct: 298 AAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS---V 351
Query: 116 GTLGYCAPEYMRTGVFNEKS 135
GT GY APE ++ GV + S
Sbjct: 352 GTHGYMAPEVLQKGVAYDSS 371
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 6/80 (7%)
Query: 56 AMDIVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVM 115
A +I+ L ++H F +V+R+ K + IL +E ++ D L+ + + H + +
Sbjct: 298 AAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS---V 351
Query: 116 GTLGYCAPEYMRTGVFNEKS 135
GT GY APE ++ GV + S
Sbjct: 352 GTHGYMAPEVLQKGVAYDSS 371
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 6/80 (7%)
Query: 56 AMDIVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVM 115
A +I+ L ++H F +V+R+ K + IL +E ++ D L+ + + H + +
Sbjct: 297 AAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS---V 350
Query: 116 GTLGYCAPEYMRTGVFNEKS 135
GT GY APE ++ GV + S
Sbjct: 351 GTHGYMAPEVLQKGVAYDSS 370
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 59/136 (43%), Gaps = 7/136 (5%)
Query: 1 QMSHNHILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIV 60
++ H +++L E PI I V E + G+L D + G + L L + +A I
Sbjct: 59 KLRHEKLVQLYAVVSEEPIXI-VTEYMSKGSLLDFLKGETGKY---LRLPQLVDMAAQIA 114
Query: 61 HALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMGTLGY 120
+AY+ V R+ + + IL E V K+ DF L+ I + E + +
Sbjct: 115 SGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKW 171
Query: 121 CAPEYMRTGVFNEKSN 136
APE G F KS+
Sbjct: 172 TAPEAALYGRFTIKSD 187
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 51/116 (43%), Gaps = 21/116 (18%)
Query: 2 MSHNHILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFE-----------PLLLK 50
+ H HI++ G C E ++VFE +++G L +R L + P + PL L
Sbjct: 77 LQHQHIVRFFGVCTEGRPLLMVFEYMRHGDL-NRFLRSHGPDAKLLAGGEDVAPGPLGLG 135
Query: 51 HRLKIAMDIVHALAY---LHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISI 103
L +A + + Y LHF V R+ T L + V K+ DF +S I
Sbjct: 136 QLLAVASQVAAGMVYLAGLHF------VHRDLATRNCLVGQGLVVKIGDFGMSRDI 185
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 62/139 (44%), Gaps = 12/139 (8%)
Query: 1 QMSHNHILKLIGCCLETPIPILVFESVQYGTLWD--RILGAPQPHFEPLLLKHRLKIAMD 58
Q SH +I++LIG C + +V E VQ G R GA L +K L++ D
Sbjct: 168 QYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGA------RLRVKTLLQMVGD 221
Query: 59 IVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMGT- 117
+ YL + + R+ L E+NV K+ DF +S +G + +
Sbjct: 222 AAAGMEYLE---SKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVP 278
Query: 118 LGYCAPEYMRTGVFNEKSN 136
+ + APE + G ++ +S+
Sbjct: 279 VKWTAPEALNYGRYSSESD 297
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 102/243 (41%), Gaps = 23/243 (9%)
Query: 2 MSHNHILKLIGCCLETPIP--ILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDI 59
+ H++I+K G C L+ E + YG+L D + Q H E + L+ I
Sbjct: 71 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL----QAHAERIDHIKLLQYTSQI 126
Query: 60 VHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGE--THITDTVMGT 117
+ YL G R + R+ T IL EN K+ DF L+ +P+ + + +
Sbjct: 127 CKGMEYL--GTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP 183
Query: 118 LGYCAPEYMRTGVFNEKSNXXXXXXXXXXXXTGWDVSDLVKDVHDLVCPFSEYLKNCFED 177
+ + APE + F+ S+ G + +L + P +E+++ D
Sbjct: 184 IFWYAPESLTESKFSVASDVWSF---------GVVLYELFTYIEKSKSPPAEFMRMIGND 234
Query: 178 NRFTEIVDHIV--VEDVSSIEKEQQLHASA-QVTFECIKDSPADRPSMVDVAKKLRQIYR 234
+ IV H++ +++ + + + EC ++ RPS D+A ++ QI
Sbjct: 235 KQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD 294
Query: 235 SLS 237
+++
Sbjct: 295 NMA 297
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 59/136 (43%), Gaps = 7/136 (5%)
Query: 1 QMSHNHILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIV 60
++ H +++L E PI I V E + G+L D + G + L L + +A I
Sbjct: 69 KLRHEKLVQLYAVVSEEPIYI-VIEYMSKGSLLDFLKGEMGKY---LRLPQLVDMAAQIA 124
Query: 61 HALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMGTLGY 120
+AY+ V R+ + + IL E V K+ DF L+ I + E + +
Sbjct: 125 SGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKW 181
Query: 121 CAPEYMRTGVFNEKSN 136
APE G F KS+
Sbjct: 182 TAPEAALYGRFTIKSD 197
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 46/92 (50%), Gaps = 7/92 (7%)
Query: 37 LGAPQPHFEPLLLKHRLKIAMDIVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFD 96
L A + FE +K + IA + YLH + I+ R+ K++ I +E+N K+ D
Sbjct: 110 LHASETKFE---MKKLIDIARQTARGMDYLH---AKSIIHRDLKSNNIFLHEDNTVKIGD 163
Query: 97 FSLSISIPE-GETHITDTVMGTLGYCAPEYMR 127
F L+ +H + + G++ + APE +R
Sbjct: 164 FGLATEKSRWSGSHQFEQLSGSILWMAPEVIR 195
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 47/92 (51%), Gaps = 7/92 (7%)
Query: 37 LGAPQPHFEPLLLKHRLKIAMDIVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFD 96
L A + FE +K + IA + YLH + I+ R+ K++ I +E+N K+ D
Sbjct: 98 LHASETKFE---MKKLIDIARQTARGMDYLH---AKSIIHRDLKSNNIFLHEDNTVKIGD 151
Query: 97 FSL-SISIPEGETHITDTVMGTLGYCAPEYMR 127
F L ++ +H + + G++ + APE +R
Sbjct: 152 FGLATVKSRWSGSHQFEQLSGSILWMAPEVIR 183
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 46/92 (50%), Gaps = 7/92 (7%)
Query: 37 LGAPQPHFEPLLLKHRLKIAMDIVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFD 96
L A + FE +K + IA + YLH + I+ R+ K++ I +E+N K+ D
Sbjct: 110 LHASETKFE---MKKLIDIARQTARGMDYLH---AKSIIHRDLKSNNIFLHEDNTVKIGD 163
Query: 97 FSLSISIPE-GETHITDTVMGTLGYCAPEYMR 127
F L+ +H + + G++ + APE +R
Sbjct: 164 FGLATEKSRWSGSHQFEQLSGSILWMAPEVIR 195
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 59/136 (43%), Gaps = 7/136 (5%)
Query: 1 QMSHNHILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIV 60
++ H +++L E PI I V E + G+L D + G + L L + +A I
Sbjct: 235 KLRHEKLVQLYAVVSEEPIYI-VTEYMSKGSLLDFLKGETGKY---LRLPQLVDMAAQIA 290
Query: 61 HALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMGTLGY 120
+AY+ V R+ + + IL E V K+ DF L+ I + E + +
Sbjct: 291 SGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKW 347
Query: 121 CAPEYMRTGVFNEKSN 136
APE G F KS+
Sbjct: 348 TAPEAALYGRFTIKSD 363
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 59/136 (43%), Gaps = 7/136 (5%)
Query: 1 QMSHNHILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIV 60
++ H +++L E PI I V E + G+L D + G + L L + +A I
Sbjct: 235 KLRHEKLVQLYAVVSEEPIYI-VTEYMSKGSLLDFLKGETGKY---LRLPQLVDMAAQIA 290
Query: 61 HALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMGTLGY 120
+AY+ V R+ + + IL E V K+ DF L+ I + E + +
Sbjct: 291 SGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKW 347
Query: 121 CAPEYMRTGVFNEKSN 136
APE G F KS+
Sbjct: 348 TAPEAALYGRFTIKSD 363
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 63/137 (45%), Gaps = 8/137 (5%)
Query: 1 QMSHNHILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIV 60
++ H ++++L+G C P ++ E + YG L D + + ++L L +A I
Sbjct: 272 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL---LYMATQIS 328
Query: 61 HALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMG-TLG 119
A+ YL + + RN L E ++ K+ DF LS + G+T+ +
Sbjct: 329 SAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKFPIK 384
Query: 120 YCAPEYMRTGVFNEKSN 136
+ APE + F+ KS+
Sbjct: 385 WTAPESLAYNKFSIKSD 401
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 63/137 (45%), Gaps = 8/137 (5%)
Query: 1 QMSHNHILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIV 60
++ H ++++L+G C P ++ E + YG L D + + ++L L +A I
Sbjct: 311 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL---LYMATQIS 367
Query: 61 HALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMG-TLG 119
A+ YL + + RN L E ++ K+ DF LS + G+T+ +
Sbjct: 368 SAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKFPIK 423
Query: 120 YCAPEYMRTGVFNEKSN 136
+ APE + F+ KS+
Sbjct: 424 WTAPESLAYNKFSIKSD 440
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 63/137 (45%), Gaps = 8/137 (5%)
Query: 1 QMSHNHILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIV 60
++ H ++++L+G C P ++ E + YG L D + + ++L L +A I
Sbjct: 269 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL---LYMATQIS 325
Query: 61 HALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMG-TLG 119
A+ YL + + RN L E ++ K+ DF LS + G+T+ +
Sbjct: 326 SAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKFPIK 381
Query: 120 YCAPEYMRTGVFNEKSN 136
+ APE + F+ KS+
Sbjct: 382 WTAPESLAYNKFSIKSD 398
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 59/136 (43%), Gaps = 7/136 (5%)
Query: 1 QMSHNHILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIV 60
++ H +++L E PI I V E + G+L D + G + L L + +A I
Sbjct: 235 KLRHEKLVQLYAVVSEEPIYI-VGEYMSKGSLLDFLKGETGKY---LRLPQLVDMAAQIA 290
Query: 61 HALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMGTLGY 120
+AY+ V R+ + + IL E V K+ DF L+ I + E + +
Sbjct: 291 SGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKW 347
Query: 121 CAPEYMRTGVFNEKSN 136
APE G F KS+
Sbjct: 348 TAPEAALYGRFTIKSD 363
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 102/243 (41%), Gaps = 23/243 (9%)
Query: 2 MSHNHILKLIGCCLETPIP--ILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDI 59
+ H++I+K G C L+ E + YG+L D + Q H E + L+ I
Sbjct: 72 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL----QKHKERIDHIKLLQYTSQI 127
Query: 60 VHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGE--THITDTVMGT 117
+ YL G R + R+ T IL EN K+ DF L+ +P+ + + +
Sbjct: 128 CKGMEYL--GTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP 184
Query: 118 LGYCAPEYMRTGVFNEKSNXXXXXXXXXXXXTGWDVSDLVKDVHDLVCPFSEYLKNCFED 177
+ + APE + F+ S+ G + +L + P +E+++ D
Sbjct: 185 IFWYAPESLTESKFSVASDVWSF---------GVVLYELFTYIEKSKSPPAEFMRMIGND 235
Query: 178 NRFTEIVDHIV--VEDVSSIEKEQQLHASA-QVTFECIKDSPADRPSMVDVAKKLRQIYR 234
+ IV H++ +++ + + + EC ++ RPS D+A ++ QI
Sbjct: 236 KQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD 295
Query: 235 SLS 237
+++
Sbjct: 296 NMA 298
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 102/243 (41%), Gaps = 23/243 (9%)
Query: 2 MSHNHILKLIGCCLETPIP--ILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDI 59
+ H++I+K G C L+ E + YG+L D + Q H E + L+ I
Sbjct: 86 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL----QKHKERIDHIKLLQYTSQI 141
Query: 60 VHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGE--THITDTVMGT 117
+ YL G R + R+ T IL EN K+ DF L+ +P+ + + +
Sbjct: 142 CKGMEYL--GTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP 198
Query: 118 LGYCAPEYMRTGVFNEKSNXXXXXXXXXXXXTGWDVSDLVKDVHDLVCPFSEYLKNCFED 177
+ + APE + F+ S+ G + +L + P +E+++ D
Sbjct: 199 IFWYAPESLTESKFSVASDVWSF---------GVVLYELFTYIEKSKSPPAEFMRMIGND 249
Query: 178 NRFTEIVDHIV--VEDVSSIEKEQQLHASA-QVTFECIKDSPADRPSMVDVAKKLRQIYR 234
+ IV H++ +++ + + + EC ++ RPS D+A ++ QI
Sbjct: 250 KQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD 309
Query: 235 SLS 237
+++
Sbjct: 310 NMA 312
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 102/243 (41%), Gaps = 23/243 (9%)
Query: 2 MSHNHILKLIGCCLETPIP--ILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDI 59
+ H++I+K G C L+ E + YG+L D + Q H E + L+ I
Sbjct: 73 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL----QKHKERIDHIKLLQYTSQI 128
Query: 60 VHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGE--THITDTVMGT 117
+ YL G R + R+ T IL EN K+ DF L+ +P+ + + +
Sbjct: 129 CKGMEYL--GTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP 185
Query: 118 LGYCAPEYMRTGVFNEKSNXXXXXXXXXXXXTGWDVSDLVKDVHDLVCPFSEYLKNCFED 177
+ + APE + F+ S+ G + +L + P +E+++ D
Sbjct: 186 IFWYAPESLTESKFSVASDVWSF---------GVVLYELFTYIEKSKSPPAEFMRMIGND 236
Query: 178 NRFTEIVDHIV--VEDVSSIEKEQQLHASA-QVTFECIKDSPADRPSMVDVAKKLRQIYR 234
+ IV H++ +++ + + + EC ++ RPS D+A ++ QI
Sbjct: 237 KQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD 296
Query: 235 SLS 237
+++
Sbjct: 297 NMA 299
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 102/243 (41%), Gaps = 23/243 (9%)
Query: 2 MSHNHILKLIGCCLETPIP--ILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDI 59
+ H++I+K G C L+ E + YG+L D + Q H E + L+ I
Sbjct: 71 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL----QKHKERIDHIKLLQYTSQI 126
Query: 60 VHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGE--THITDTVMGT 117
+ YL G R + R+ T IL EN K+ DF L+ +P+ + + +
Sbjct: 127 CKGMEYL--GTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP 183
Query: 118 LGYCAPEYMRTGVFNEKSNXXXXXXXXXXXXTGWDVSDLVKDVHDLVCPFSEYLKNCFED 177
+ + APE + F+ S+ G + +L + P +E+++ D
Sbjct: 184 IFWYAPESLTESKFSVASDVWSF---------GVVLYELFTYIEKSKSPPAEFMRMIGND 234
Query: 178 NRFTEIVDHIV--VEDVSSIEKEQQLHASA-QVTFECIKDSPADRPSMVDVAKKLRQIYR 234
+ IV H++ +++ + + + EC ++ RPS D+A ++ QI
Sbjct: 235 KQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD 294
Query: 235 SLS 237
+++
Sbjct: 295 NMA 297
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 102/243 (41%), Gaps = 23/243 (9%)
Query: 2 MSHNHILKLIGCCLETPIP--ILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDI 59
+ H++I+K G C L+ E + YG+L D + Q H E + L+ I
Sbjct: 68 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL----QKHKERIDHIKLLQYTSQI 123
Query: 60 VHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGE--THITDTVMGT 117
+ YL G R + R+ T IL EN K+ DF L+ +P+ + + +
Sbjct: 124 CKGMEYL--GTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP 180
Query: 118 LGYCAPEYMRTGVFNEKSNXXXXXXXXXXXXTGWDVSDLVKDVHDLVCPFSEYLKNCFED 177
+ + APE + F+ S+ G + +L + P +E+++ D
Sbjct: 181 IFWYAPESLTESKFSVASDVWSF---------GVVLYELFTYIEKSKSPPAEFMRMIGND 231
Query: 178 NRFTEIVDHIV--VEDVSSIEKEQQLHASA-QVTFECIKDSPADRPSMVDVAKKLRQIYR 234
+ IV H++ +++ + + + EC ++ RPS D+A ++ QI
Sbjct: 232 KQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD 291
Query: 235 SLS 237
+++
Sbjct: 292 NMA 294
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 102/243 (41%), Gaps = 23/243 (9%)
Query: 2 MSHNHILKLIGCCLETPIP--ILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDI 59
+ H++I+K G C L+ E + YG+L D + Q H E + L+ I
Sbjct: 74 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL----QKHKERIDHIKLLQYTSQI 129
Query: 60 VHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGE--THITDTVMGT 117
+ YL G R + R+ T IL EN K+ DF L+ +P+ + + +
Sbjct: 130 CKGMEYL--GTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP 186
Query: 118 LGYCAPEYMRTGVFNEKSNXXXXXXXXXXXXTGWDVSDLVKDVHDLVCPFSEYLKNCFED 177
+ + APE + F+ S+ G + +L + P +E+++ D
Sbjct: 187 IFWYAPESLTESKFSVASDVWSF---------GVVLYELFTYIEKSKSPPAEFMRMIGND 237
Query: 178 NRFTEIVDHIV--VEDVSSIEKEQQLHASA-QVTFECIKDSPADRPSMVDVAKKLRQIYR 234
+ IV H++ +++ + + + EC ++ RPS D+A ++ QI
Sbjct: 238 KQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD 297
Query: 235 SLS 237
+++
Sbjct: 298 NMA 300
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 102/243 (41%), Gaps = 23/243 (9%)
Query: 2 MSHNHILKLIGCCLETPIP--ILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDI 59
+ H++I+K G C L+ E + YG+L D + Q H E + L+ I
Sbjct: 68 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL----QKHKERIDHIKLLQYTSQI 123
Query: 60 VHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGET--HITDTVMGT 117
+ YL G R + R+ T IL EN K+ DF L+ +P+ + + +
Sbjct: 124 CKGMEYL--GTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESP 180
Query: 118 LGYCAPEYMRTGVFNEKSNXXXXXXXXXXXXTGWDVSDLVKDVHDLVCPFSEYLKNCFED 177
+ + APE + F+ S+ G + +L + P +E+++ D
Sbjct: 181 IFWYAPESLTESKFSVASDVWSF---------GVVLYELFTYIEKSKSPPAEFMRMIGND 231
Query: 178 NRFTEIVDHIV--VEDVSSIEKEQQLHASA-QVTFECIKDSPADRPSMVDVAKKLRQIYR 234
+ IV H++ +++ + + + EC ++ RPS D+A ++ QI
Sbjct: 232 KQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD 291
Query: 235 SLS 237
+++
Sbjct: 292 NMA 294
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 59/136 (43%), Gaps = 7/136 (5%)
Query: 1 QMSHNHILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIV 60
++ H +++L E PI I V E + G+L D + G + L L + +A I
Sbjct: 69 KLRHEKLVQLYAVVSEEPIYI-VIEYMSKGSLLDFLKGEMGKY---LRLPQLVDMAAQIA 124
Query: 61 HALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMGTLGY 120
+AY+ V R+ + + IL E V K+ DF L+ I + E + +
Sbjct: 125 SGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKW 181
Query: 121 CAPEYMRTGVFNEKSN 136
APE G F KS+
Sbjct: 182 TAPEAALYGRFTIKSD 197
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 102/243 (41%), Gaps = 23/243 (9%)
Query: 2 MSHNHILKLIGCCLETPIP--ILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDI 59
+ H++I+K G C L+ E + YG+L D + Q H E + L+ I
Sbjct: 75 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL----QKHKERIDHIKLLQYTSQI 130
Query: 60 VHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGE--THITDTVMGT 117
+ YL G R + R+ T IL EN K+ DF L+ +P+ + + +
Sbjct: 131 CKGMEYL--GTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP 187
Query: 118 LGYCAPEYMRTGVFNEKSNXXXXXXXXXXXXTGWDVSDLVKDVHDLVCPFSEYLKNCFED 177
+ + APE + F+ S+ G + +L + P +E+++ D
Sbjct: 188 IFWYAPESLTESKFSVASDVWSF---------GVVLYELFTYIEKSKSPPAEFMRMIGND 238
Query: 178 NRFTEIVDHIV--VEDVSSIEKEQQLHASA-QVTFECIKDSPADRPSMVDVAKKLRQIYR 234
+ IV H++ +++ + + + EC ++ RPS D+A ++ QI
Sbjct: 239 KQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD 298
Query: 235 SLS 237
+++
Sbjct: 299 NMA 301
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 39/73 (53%), Gaps = 5/73 (6%)
Query: 56 AMDIVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVM 115
A +I L LH IV+R+ K IL ++ ++ D L++ +PEG+T +
Sbjct: 292 AAEICCGLEDLHR---ERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT--IKGRV 346
Query: 116 GTLGYCAPEYMRT 128
GT+GY APE ++
Sbjct: 347 GTVGYMAPEVVKN 359
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 64/132 (48%), Gaps = 12/132 (9%)
Query: 2 MSHNHILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIVH 61
++H I+++ G + ++ + ++ G L+ +L Q P+ + A ++
Sbjct: 63 VTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFS-LLRKSQRFPNPVAKFY----AAEVCL 117
Query: 62 ALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMGTLGYC 121
AL YLH + I++R+ K IL ++ K+ DF + +P+ +T + GT Y
Sbjct: 118 ALEYLH---SKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPD----VTYXLCGTPDYI 170
Query: 122 APEYMRTGVFNE 133
APE + T +N+
Sbjct: 171 APEVVSTKPYNK 182
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 41/74 (55%), Gaps = 7/74 (9%)
Query: 58 DIVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSL-SISIPEGETHITDTVMG 116
+I AL +LH + I++R+ K I+ N + KL DF L SI +G +T T G
Sbjct: 129 EISMALGHLH---QKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGT--VTHTFCG 183
Query: 117 TLGYCAPE-YMRTG 129
T+ Y APE MR+G
Sbjct: 184 TIEYMAPEILMRSG 197
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 33/55 (60%), Gaps = 2/55 (3%)
Query: 74 IVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMGTLGYCAPEYMRT 128
IV+R+ K IL ++ ++ D L++ +PEG+T +GT+GY APE ++
Sbjct: 307 IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT--IKGRVGTVGYMAPEVVKN 359
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 102/243 (41%), Gaps = 23/243 (9%)
Query: 2 MSHNHILKLIGCCLETPIP--ILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDI 59
+ H++I+K G C L+ E + YG+L D + Q H E + L+ I
Sbjct: 68 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL----QKHKERIDHIKLLQYTSQI 123
Query: 60 VHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGE--THITDTVMGT 117
+ YL G R + R+ T IL EN K+ DF L+ +P+ + + +
Sbjct: 124 CKGMEYL--GTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP 180
Query: 118 LGYCAPEYMRTGVFNEKSNXXXXXXXXXXXXTGWDVSDLVKDVHDLVCPFSEYLKNCFED 177
+ + APE + F+ S+ G + +L + P +E+++ D
Sbjct: 181 IFWYAPESLTESKFSVASDVWSF---------GVVLYELFTYIEKSKSPPAEFMRMIGND 231
Query: 178 NRFTEIVDHIV--VEDVSSIEKEQQLHASA-QVTFECIKDSPADRPSMVDVAKKLRQIYR 234
+ IV H++ +++ + + + EC ++ RPS D+A ++ QI
Sbjct: 232 KQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD 291
Query: 235 SLS 237
+++
Sbjct: 292 NMA 294
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 59/136 (43%), Gaps = 7/136 (5%)
Query: 1 QMSHNHILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIV 60
++ H +++L E PI I V E + G+L D + G + L L + +A I
Sbjct: 62 KLRHEKLVQLYAVVSEEPIYI-VTEYMSKGSLLDFLKGETGKY---LRLPQLVDMAAQIA 117
Query: 61 HALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMGTLGY 120
+AY+ V R+ + + IL E V K+ DF L+ I + E + +
Sbjct: 118 SGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKW 174
Query: 121 CAPEYMRTGVFNEKSN 136
APE G F KS+
Sbjct: 175 TAPEAALYGRFTIKSD 190
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 102/243 (41%), Gaps = 23/243 (9%)
Query: 2 MSHNHILKLIGCCLETPIP--ILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDI 59
+ H++I+K G C L+ E + YG+L D + Q H E + L+ I
Sbjct: 67 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL----QKHKERIDHIKLLQYTSQI 122
Query: 60 VHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGE--THITDTVMGT 117
+ YL G R + R+ T IL EN K+ DF L+ +P+ + + +
Sbjct: 123 CKGMEYL--GTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP 179
Query: 118 LGYCAPEYMRTGVFNEKSNXXXXXXXXXXXXTGWDVSDLVKDVHDLVCPFSEYLKNCFED 177
+ + APE + F+ S+ G + +L + P +E+++ D
Sbjct: 180 IFWYAPESLTESKFSVASDVWSF---------GVVLYELFTYIEKSKSPPAEFMRMIGND 230
Query: 178 NRFTEIVDHIV--VEDVSSIEKEQQLHASA-QVTFECIKDSPADRPSMVDVAKKLRQIYR 234
+ IV H++ +++ + + + EC ++ RPS D+A ++ QI
Sbjct: 231 KQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD 290
Query: 235 SLS 237
+++
Sbjct: 291 NMA 293
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 53/238 (22%), Positives = 99/238 (41%), Gaps = 23/238 (9%)
Query: 2 MSHNHILKLIGCCLETPIP--ILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDI 59
+ H++I+K G C L+ E + YG+L D + Q H E + L+ I
Sbjct: 86 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL----QKHKERIDHIKLLQYTSQI 141
Query: 60 VHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGE--THITDTVMGT 117
+ YL G R + R+ T IL EN K+ DF L+ +P+ + + +
Sbjct: 142 CKGMEYL--GTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP 198
Query: 118 LGYCAPEYMRTGVFNEKSNXXXXXXXXXXXXTGWDVSDLVKDVHDLVCPFSEYLKNCFED 177
+ + APE + F+ S+ G + +L + P +E+++ D
Sbjct: 199 IFWYAPESLTESKFSVASDVWSF---------GVVLYELFTYIEKSKSPPAEFMRMIGND 249
Query: 178 NRFTEIVDHIV--VEDVSSIEKEQQLHASA-QVTFECIKDSPADRPSMVDVAKKLRQI 232
+ IV H++ +++ + + + EC ++ RPS D+A ++ QI
Sbjct: 250 KQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 307
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 101/243 (41%), Gaps = 23/243 (9%)
Query: 2 MSHNHILKLIGCCLETPIP--ILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDI 59
+ H++I+K G C L+ E + YG+L D + Q H E + L+ I
Sbjct: 66 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL----QKHKERIDHIKLLQYTSQI 121
Query: 60 VHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGE--THITDTVMGT 117
+ YL G R + R+ T IL EN K+ DF L+ +P+ + + +
Sbjct: 122 CKGMEYL--GTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP 178
Query: 118 LGYCAPEYMRTGVFNEKSNXXXXXXXXXXXXTGWDVSDLVKDVHDLVCPFSEYLKNCFED 177
+ + APE + F+ S+ G + +L + P +E+++ D
Sbjct: 179 IFWYAPESLTESKFSVASDVWSF---------GVVLYELFTYIEKSKSPPAEFMRMIGND 229
Query: 178 NRFTEIVDHIV--VEDVSSIEKEQQLHASA-QVTFECIKDSPADRPSMVDVAKKLRQIYR 234
+ IV H++ +++ + + + EC ++ RPS D+A ++ QI
Sbjct: 230 KQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD 289
Query: 235 SLS 237
++
Sbjct: 290 QMA 292
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 101/243 (41%), Gaps = 23/243 (9%)
Query: 2 MSHNHILKLIGCCLETPIP--ILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDI 59
+ H++I+K G C L+ E + YG+L D + Q H E + L+ I
Sbjct: 99 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL----QKHKERIDHIKLLQYTSQI 154
Query: 60 VHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGE--THITDTVMGT 117
+ YL G R + R+ T IL EN K+ DF L+ +P+ + + +
Sbjct: 155 CKGMEYL--GTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP 211
Query: 118 LGYCAPEYMRTGVFNEKSNXXXXXXXXXXXXTGWDVSDLVKDVHDLVCPFSEYLKNCFED 177
+ + APE + F+ S+ G + +L + P +E+++ D
Sbjct: 212 IFWYAPESLTESKFSVASDVWSF---------GVVLYELFTYIEKSKSPPAEFMRMIGND 262
Query: 178 NRFTEIVDHIV--VEDVSSIEKEQQLHASA-QVTFECIKDSPADRPSMVDVAKKLRQIYR 234
+ IV H++ +++ + + + EC ++ RPS D+A ++ QI
Sbjct: 263 KQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD 322
Query: 235 SLS 237
++
Sbjct: 323 QMA 325
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 59/136 (43%), Gaps = 7/136 (5%)
Query: 1 QMSHNHILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIV 60
++ H +++L E PI +V E + G+L D + G + L L + +A I
Sbjct: 318 KLRHEKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGETGKY---LRLPQLVDMAAQIA 373
Query: 61 HALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMGTLGY 120
+AY+ V R+ + + IL E V K+ DF L+ I + E + +
Sbjct: 374 SGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKW 430
Query: 121 CAPEYMRTGVFNEKSN 136
APE G F KS+
Sbjct: 431 TAPEAALYGRFTIKSD 446
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 63/137 (45%), Gaps = 8/137 (5%)
Query: 1 QMSHNHILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIV 60
++ H ++++L+G C P ++ E + YG L D + + ++L L +A I
Sbjct: 65 EIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVL---LYMATQIS 121
Query: 61 HALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMG-TLG 119
A+ YL + + R+ L E ++ K+ DF LS + G+T+ +
Sbjct: 122 SAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKFPIK 177
Query: 120 YCAPEYMRTGVFNEKSN 136
+ APE + F+ KS+
Sbjct: 178 WTAPESLAYNKFSIKSD 194
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 37/68 (54%), Gaps = 4/68 (5%)
Query: 59 IVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMGTL 118
IV L +LH R I++R+ K +L +++ ++ D L++ + G+T T GT
Sbjct: 298 IVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-TKGYAGTP 353
Query: 119 GYCAPEYM 126
G+ APE +
Sbjct: 354 GFMAPELL 361
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 37/68 (54%), Gaps = 4/68 (5%)
Query: 59 IVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMGTL 118
IV L +LH R I++R+ K +L +++ ++ D L++ + G+T T GT
Sbjct: 298 IVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-TKGYAGTP 353
Query: 119 GYCAPEYM 126
G+ APE +
Sbjct: 354 GFMAPELL 361
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 37/68 (54%), Gaps = 4/68 (5%)
Query: 59 IVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMGTL 118
IV L +LH R I++R+ K +L +++ ++ D L++ + G+T T GT
Sbjct: 298 IVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-TKGYAGTP 353
Query: 119 GYCAPEYM 126
G+ APE +
Sbjct: 354 GFMAPELL 361
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 47/110 (42%), Gaps = 17/110 (15%)
Query: 2 MSHNHILKLIGCCLETPIPILVFESVQYGTLW--------DRILGAPQPHFEPLLLKHRL 53
+ H HI+K G C+E I+VFE +++G L D +L A L L
Sbjct: 72 LQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQML 131
Query: 54 KIAMDIVHALAYL---HFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLS 100
IA I + YL HF V R+ T L E + K+ DF +S
Sbjct: 132 HIAQQIAAGMVYLASQHF------VHRDLATRNCLVGENLLVKIGDFGMS 175
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 63/137 (45%), Gaps = 8/137 (5%)
Query: 1 QMSHNHILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIV 60
++ H ++++L+G C P ++ E + YG L D + + ++L L +A I
Sbjct: 65 EIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVL---LYMATQIS 121
Query: 61 HALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMG-TLG 119
A+ YL + + R+ L E ++ K+ DF LS + G+T+ +
Sbjct: 122 SAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKFPIK 177
Query: 120 YCAPEYMRTGVFNEKSN 136
+ APE + F+ KS+
Sbjct: 178 WTAPESLAYNKFSIKSD 194
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 59/136 (43%), Gaps = 7/136 (5%)
Query: 1 QMSHNHILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIV 60
++ H +++L E PI I V E + G+L D + G + L L + +A I
Sbjct: 60 KLRHEKLVQLYAVVSEEPIYI-VTEYMSKGSLLDFLKGEMGKY---LRLPQLVDMAAQIA 115
Query: 61 HALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMGTLGY 120
+AY+ V R+ + + IL E V K+ DF L+ I + E + +
Sbjct: 116 SGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKW 172
Query: 121 CAPEYMRTGVFNEKSN 136
APE G F KS+
Sbjct: 173 TAPEAALYGRFTIKSD 188
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 63/137 (45%), Gaps = 8/137 (5%)
Query: 1 QMSHNHILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIV 60
++ H ++++L+G C P ++ E + YG L D + + ++L L +A I
Sbjct: 70 EIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVL---LYMATQIS 126
Query: 61 HALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDT-VMGTLG 119
A+ YL + + R+ L E ++ K+ DF LS + G+T+ +
Sbjct: 127 SAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKFPIK 182
Query: 120 YCAPEYMRTGVFNEKSN 136
+ APE + F+ KS+
Sbjct: 183 WTAPESLAYNKFSIKSD 199
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 37/68 (54%), Gaps = 4/68 (5%)
Query: 59 IVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMGTL 118
IV L +LH R I++R+ K +L +++ ++ D L++ + G+T T GT
Sbjct: 298 IVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-TKGYAGTP 353
Query: 119 GYCAPEYM 126
G+ APE +
Sbjct: 354 GFMAPELL 361
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 60/139 (43%), Gaps = 13/139 (9%)
Query: 1 QMSHNHILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFE-PLLLKHRLKIA--M 57
++ H +++L E PI I V E + G+L D + G + P L+ +IA M
Sbjct: 66 KLRHEKLVQLYAVVSEEPIYI-VTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGM 124
Query: 58 DIVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMGT 117
V + Y+H R+ + + IL E V K+ DF L+ I + E
Sbjct: 125 AYVERMNYVH---------RDLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFP 175
Query: 118 LGYCAPEYMRTGVFNEKSN 136
+ + APE G F KS+
Sbjct: 176 IKWTAPEAALYGRFTIKSD 194
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 40.4 bits (93), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 60/139 (43%), Gaps = 13/139 (9%)
Query: 1 QMSHNHILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFE-PLLLKHRLKIA--M 57
++ H +++L E PI I V E + G+L D + G + P L+ +IA M
Sbjct: 66 KLRHEKLVQLYAVVSEEPIYI-VTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGM 124
Query: 58 DIVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMGT 117
V + Y+H R+ + + IL E V K+ DF L+ I + E
Sbjct: 125 AYVERMNYVH---------RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP 175
Query: 118 LGYCAPEYMRTGVFNEKSN 136
+ + APE G F KS+
Sbjct: 176 IKWTAPEAALYGRFTIKSD 194
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 40.4 bits (93), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 59/136 (43%), Gaps = 7/136 (5%)
Query: 1 QMSHNHILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIV 60
++ H +++L E PI I V E + G+L D + G + L L + +A I
Sbjct: 58 KLRHEKLVQLYAVVSEEPIYI-VTEYMSKGSLLDFLKGEMGKY---LRLPQLVDMAAQIA 113
Query: 61 HALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMGTLGY 120
+AY+ V R+ + + IL E V K+ DF L+ I + E + +
Sbjct: 114 SGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKW 170
Query: 121 CAPEYMRTGVFNEKSN 136
APE G F KS+
Sbjct: 171 TAPEAALYGRFTIKSD 186
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 40.4 bits (93), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 58/136 (42%), Gaps = 7/136 (5%)
Query: 1 QMSHNHILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIV 60
++ H +++L E PI I V E + G+L D + G + L L + +A I
Sbjct: 236 KLRHEKLVQLYAVVSEEPIYI-VTEYMSKGSLLDFLKGEMGKY---LRLPQLVDMAAQIA 291
Query: 61 HALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMGTLGY 120
+AY+ V R+ + + IL E V K+ DF L I + E + +
Sbjct: 292 SGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKFPIKW 348
Query: 121 CAPEYMRTGVFNEKSN 136
APE G F KS+
Sbjct: 349 TAPEAALYGRFTIKSD 364
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 40.4 bits (93), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 59/136 (43%), Gaps = 7/136 (5%)
Query: 1 QMSHNHILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIV 60
++ H +++L E PI I V E + G+L D + G + L L + +A I
Sbjct: 69 KLRHEKLVQLYAVVSEEPIYI-VTEYMSKGSLLDFLKGEMGKY---LRLPQLVDMAAQIA 124
Query: 61 HALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMGTLGY 120
+AY+ V R+ + + IL E V K+ DF L+ I + E + +
Sbjct: 125 SGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKW 181
Query: 121 CAPEYMRTGVFNEKSN 136
APE G F KS+
Sbjct: 182 TAPEAALYGRFTIKSD 197
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 63/134 (47%), Gaps = 13/134 (9%)
Query: 2 MSHNH-ILKLIGCCLETPIPIL-VFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDI 59
++ NH L + CC +TP + V E V G L I + + F+ + A +I
Sbjct: 79 LARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRR--FDEARARF---YAAEI 133
Query: 60 VHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSL-SISIPEGETHITDTVMGTL 118
+ AL +LH + I++R+ K +L + E KL DF + I G T T T GT
Sbjct: 134 ISALMFLH---DKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVT--TATFCGTP 188
Query: 119 GYCAPEYMRTGVFN 132
Y APE ++ ++
Sbjct: 189 DYIAPEILQEMLYG 202
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 59/136 (43%), Gaps = 7/136 (5%)
Query: 1 QMSHNHILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIV 60
++ H +++L E PI I V E + G+L D + G + L L + +A I
Sbjct: 69 KLRHEKLVQLYAVVSEEPIYI-VCEYMSKGSLLDFLKGEMGKY---LRLPQLVDMAAQIA 124
Query: 61 HALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMGTLGY 120
+AY+ V R+ + + IL E V K+ DF L+ I + E + +
Sbjct: 125 SGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKW 181
Query: 121 CAPEYMRTGVFNEKSN 136
APE G F KS+
Sbjct: 182 TAPEAALYGRFTIKSD 197
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 58/136 (42%), Gaps = 7/136 (5%)
Query: 1 QMSHNHILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIV 60
++ H +++L E PI I V E + G L D + G + L L + +A I
Sbjct: 69 KLRHEKLVQLYAVVSEEPIYI-VMEYMSKGCLLDFLKGEMGKY---LRLPQLVDMAAQIA 124
Query: 61 HALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMGTLGY 120
+AY+ V R+ + + IL E V K+ DF L+ I + E + +
Sbjct: 125 SGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKW 181
Query: 121 CAPEYMRTGVFNEKSN 136
APE G F KS+
Sbjct: 182 TAPEAALYGRFTIKSD 197
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 59/136 (43%), Gaps = 7/136 (5%)
Query: 1 QMSHNHILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIV 60
++ H +++L E PI I V E + G+L D + G + L L + +A I
Sbjct: 69 KIRHEKLVQLYAVVSEEPIYI-VTEYMSKGSLLDFLKGEMGKY---LRLPQLVDMAAQIA 124
Query: 61 HALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMGTLGY 120
+AY+ V R+ + + IL E V K+ DF L+ I + E + +
Sbjct: 125 SGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKW 181
Query: 121 CAPEYMRTGVFNEKSN 136
APE G F KS+
Sbjct: 182 TAPEAALYGRFTIKSD 197
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 63/137 (45%), Gaps = 8/137 (5%)
Query: 1 QMSHNHILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIV 60
++ H ++++L+G C P ++ E + YG L D + + ++L L +A I
Sbjct: 70 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL---LYMATQIS 126
Query: 61 HALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMG-TLG 119
A+ YL + + R+ L E ++ K+ DF LS + G+T+ +
Sbjct: 127 SAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKFPIK 182
Query: 120 YCAPEYMRTGVFNEKSN 136
+ APE + F+ KS+
Sbjct: 183 WTAPESLAYNKFSIKSD 199
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 63/137 (45%), Gaps = 8/137 (5%)
Query: 1 QMSHNHILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIV 60
++ H ++++L+G C P ++ E + YG L D + + ++L L +A I
Sbjct: 65 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL---LYMATQIS 121
Query: 61 HALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMG-TLG 119
A+ YL + + R+ L E ++ K+ DF LS + G+T+ +
Sbjct: 122 SAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKFPIK 177
Query: 120 YCAPEYMRTGVFNEKSN 136
+ APE + F+ KS+
Sbjct: 178 WTAPESLAYNKFSIKSD 194
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 63/137 (45%), Gaps = 8/137 (5%)
Query: 1 QMSHNHILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIV 60
++ H ++++L+G C P ++ E + YG L D + + ++L L +A I
Sbjct: 78 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL---LYMATQIS 134
Query: 61 HALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDT-VMGTLG 119
A+ YL + + R+ L E ++ K+ DF LS + G+T+ +
Sbjct: 135 SAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKFPIK 190
Query: 120 YCAPEYMRTGVFNEKSN 136
+ APE + F+ KS+
Sbjct: 191 WTAPESLAYNKFSIKSD 207
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 63/137 (45%), Gaps = 8/137 (5%)
Query: 1 QMSHNHILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIV 60
++ H ++++L+G C P ++ E + YG L D + + ++L L +A I
Sbjct: 70 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL---LYMATQIS 126
Query: 61 HALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMG-TLG 119
A+ YL + + R+ L E ++ K+ DF LS + G+T+ +
Sbjct: 127 SAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKFPIK 182
Query: 120 YCAPEYMRTGVFNEKSN 136
+ APE + F+ KS+
Sbjct: 183 WTAPESLAYNKFSIKSD 199
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 63/137 (45%), Gaps = 8/137 (5%)
Query: 1 QMSHNHILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIV 60
++ H ++++L+G C P ++ E + YG L D + + ++L L +A I
Sbjct: 67 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL---LYMATQIS 123
Query: 61 HALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMG-TLG 119
A+ YL + + R+ L E ++ K+ DF LS + G+T+ +
Sbjct: 124 SAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKFPIK 179
Query: 120 YCAPEYMRTGVFNEKSN 136
+ APE + F+ KS+
Sbjct: 180 WTAPESLAYNKFSIKSD 196
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 63/137 (45%), Gaps = 8/137 (5%)
Query: 1 QMSHNHILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIV 60
++ H ++++L+G C P ++ E + YG L D + + ++L L +A I
Sbjct: 65 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL---LYMATQIS 121
Query: 61 HALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMG-TLG 119
A+ YL + + R+ L E ++ K+ DF LS + G+T+ +
Sbjct: 122 SAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKFPIK 177
Query: 120 YCAPEYMRTGVFNEKSN 136
+ APE + F+ KS+
Sbjct: 178 WTAPESLAYNKFSIKSD 194
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 63/137 (45%), Gaps = 8/137 (5%)
Query: 1 QMSHNHILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIV 60
++ H ++++L+G C P ++ E + YG L D + + ++L L +A I
Sbjct: 67 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL---LYMATQIS 123
Query: 61 HALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMG-TLG 119
A+ YL + + R+ L E ++ K+ DF LS + G+T+ +
Sbjct: 124 SAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKFPIK 179
Query: 120 YCAPEYMRTGVFNEKSN 136
+ APE + F+ KS+
Sbjct: 180 WTAPESLAYNKFSIKSD 196
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 63/137 (45%), Gaps = 8/137 (5%)
Query: 1 QMSHNHILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIV 60
++ H ++++L+G C P ++ E + YG L D + + ++L L +A I
Sbjct: 70 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL---LYMATQIS 126
Query: 61 HALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDT-VMGTLG 119
A+ YL + + R+ L E ++ K+ DF LS + G+T+ +
Sbjct: 127 SAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKFPIK 182
Query: 120 YCAPEYMRTGVFNEKSN 136
+ APE + F+ KS+
Sbjct: 183 WTAPESLAYNKFSIKSD 199
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 63/137 (45%), Gaps = 8/137 (5%)
Query: 1 QMSHNHILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIV 60
++ H ++++L+G C P ++ E + YG L D + + ++L L +A I
Sbjct: 65 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL---LYMATQIS 121
Query: 61 HALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDT-VMGTLG 119
A+ YL + + R+ L E ++ K+ DF LS + G+T+ +
Sbjct: 122 SAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKFPIK 177
Query: 120 YCAPEYMRTGVFNEKSN 136
+ APE + F+ KS+
Sbjct: 178 WTAPESLAYNKFSIKSD 194
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 63/137 (45%), Gaps = 8/137 (5%)
Query: 1 QMSHNHILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIV 60
++ H ++++L+G C P ++ E + YG L D + + ++L L +A I
Sbjct: 69 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL---LYMATQIS 125
Query: 61 HALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDT-VMGTLG 119
A+ YL + + R+ L E ++ K+ DF LS + G+T+ +
Sbjct: 126 SAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKFPIK 181
Query: 120 YCAPEYMRTGVFNEKSN 136
+ APE + F+ KS+
Sbjct: 182 WTAPESLAYNKFSIKSD 198
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 63/137 (45%), Gaps = 8/137 (5%)
Query: 1 QMSHNHILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIV 60
++ H ++++L+G C P ++ E + YG L D + + ++L L +A I
Sbjct: 65 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL---LYMATQIS 121
Query: 61 HALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDT-VMGTLG 119
A+ YL + + R+ L E ++ K+ DF LS + G+T+ +
Sbjct: 122 SAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKFPIK 177
Query: 120 YCAPEYMRTGVFNEKSN 136
+ APE + F+ KS+
Sbjct: 178 WTAPESLAYNKFSIKSD 194
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 63/137 (45%), Gaps = 8/137 (5%)
Query: 1 QMSHNHILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIV 60
++ H ++++L+G C P ++ E + YG L D + + ++L L +A I
Sbjct: 67 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL---LYMATQIS 123
Query: 61 HALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMG-TLG 119
A+ YL + + R+ L E ++ K+ DF LS + G+T+ +
Sbjct: 124 SAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAPAGAKFPIK 179
Query: 120 YCAPEYMRTGVFNEKSN 136
+ APE + F+ KS+
Sbjct: 180 WTAPESLAYNKFSIKSD 196
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 63/137 (45%), Gaps = 8/137 (5%)
Query: 1 QMSHNHILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIV 60
++ H ++++L+G C P ++ E + YG L D + + ++L L +A I
Sbjct: 66 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL---LYMATQIS 122
Query: 61 HALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMG-TLG 119
A+ YL + + R+ L E ++ K+ DF LS + G+T+ +
Sbjct: 123 SAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAPAGAKFPIK 178
Query: 120 YCAPEYMRTGVFNEKSN 136
+ APE + F+ KS+
Sbjct: 179 WTAPESLAYNKFSIKSD 195
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 95/221 (42%), Gaps = 19/221 (8%)
Query: 28 QYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIVHALAYLH---FGFP-RP-IVFRNFKTS 82
++G+L+D + + EP L L++A+ LA+LH FG +P I R+FK+
Sbjct: 89 EHGSLYDFL---QRQTLEPHLA---LRLAVSAACGLAHLHVEIFGTQGKPAIAHRDFKSR 142
Query: 83 CILFNEENVAKLFDFSLSISIPEGETHI---TDTVMGTLGYCAPEYMRTGVFNEKSNXXX 139
+L + D L++ +G ++ + +GT Y APE + + +
Sbjct: 143 NVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVGTKRYMAPEVLDEQIRTDCFESYK 202
Query: 140 XXXXXXXXXTGWDVS--DLVKD-VHDLVCPFSEYLKN--CFEDNRFTEIVDHIVVEDVSS 194
W+++ +V V D PF + + N FED + VD +
Sbjct: 203 WTDIWAFGLVLWEIARRTIVNGIVEDYRPPFYDVVPNDPSFEDMKKVVCVDQQTPTIPNR 262
Query: 195 IEKEQQLHASAQVTFECIKDSPADRPSMVDVAKKLRQIYRS 235
+ + L AQ+ EC +P+ R + + + K L++I S
Sbjct: 263 LAADPVLSGLAQMMRECWYPNPSARLTALRIKKTLQKISNS 303
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 58/133 (43%), Gaps = 11/133 (8%)
Query: 2 MSHNHILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIVH 61
+ H +IL+L G + L+ E GT++ + + F+ + ++ +
Sbjct: 66 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDE---QRTATYITELAN 120
Query: 62 ALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMGTLGYC 121
AL+Y H + ++ R+ K +L K+ DF S+ P DT+ GTL Y
Sbjct: 121 ALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---DTLCGTLDYL 174
Query: 122 APEYMRTGVFNEK 134
PE + + +EK
Sbjct: 175 PPEMIEGRMHDEK 187
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/253 (20%), Positives = 95/253 (37%), Gaps = 46/253 (18%)
Query: 1 QMSHNHILKLIGCCLETPIPILVFESVQYGTLW-----DRILGAP--------------Q 41
Q++H H++KL G C + +L+ E +YG+L R +G
Sbjct: 82 QVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDH 141
Query: 42 PHFEPLLLKHRLKIAMDIVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSI 101
P L + + A I + YL +V R+ IL E K+ DF LS
Sbjct: 142 PDERALTMGDLISFAWQISQGMQYLA---EMKLVHRDLAARNILVAEGRKMKISDFGLSR 198
Query: 102 SIPEGETHITDTVMGTL--GYCAPEYMRTGVFNEKSNXXXXXXXXXXXXTGWDVSDLVKD 159
+ E ++++ + G + + A E + ++ +S+ W++ L +
Sbjct: 199 DVYEEDSYVKRS-QGRIPVKWMAIESLFDHIYTTQSDVWSFGVLL------WEIVTLGGN 251
Query: 160 VHDLVCPFSEYLKNCFEDNRFTEIVDHIVVEDVSSIEKEQQLHASAQVTFECIKDSPADR 219
+ + P E L N + E D+ E ++ +C K P R
Sbjct: 252 PYPGIPP--ERLFNLLKTGHRMERPDNCSEE-------------MYRLMLQCWKQEPDKR 296
Query: 220 PSMVDVAKKLRQI 232
P D++K L ++
Sbjct: 297 PVFADISKDLEKM 309
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 62/137 (45%), Gaps = 8/137 (5%)
Query: 1 QMSHNHILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIV 60
++ H ++++L+G C P ++ E + YG L D + + ++L L +A I
Sbjct: 63 EIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVL---LYMATQIS 119
Query: 61 HALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMG-TLG 119
A+ YL + + R+ L E ++ K+ DF LS + G+T +
Sbjct: 120 SAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTXTAHAGAKFPIK 175
Query: 120 YCAPEYMRTGVFNEKSN 136
+ APE + F+ KS+
Sbjct: 176 WTAPESLAYNKFSIKSD 192
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 58/133 (43%), Gaps = 11/133 (8%)
Query: 2 MSHNHILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIVH 61
+ H +IL+L G + L+ E GT++ + + F+ + ++ +
Sbjct: 69 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSR--FDE---QRTATYITELAN 123
Query: 62 ALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMGTLGYC 121
AL+Y H + ++ R+ K +L K+ DF S+ P DT+ GTL Y
Sbjct: 124 ALSYCH---SKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRR---DTLCGTLDYL 177
Query: 122 APEYMRTGVFNEK 134
PE + + +EK
Sbjct: 178 PPEMIEGRMHDEK 190
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 62/137 (45%), Gaps = 8/137 (5%)
Query: 1 QMSHNHILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIV 60
++ H ++++L+G C P ++ E + YG L D + + ++L L +A I
Sbjct: 66 EIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVL---LYMATQIS 122
Query: 61 HALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMG-TLG 119
A+ YL + + R+ L E ++ K+ DF LS + G+T +
Sbjct: 123 SAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTXTAHAGAKFPIK 178
Query: 120 YCAPEYMRTGVFNEKSN 136
+ APE + F+ KS+
Sbjct: 179 WTAPESLAYNKFSIKSD 195
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 58/136 (42%), Gaps = 7/136 (5%)
Query: 1 QMSHNHILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIV 60
++ H +++L E PI I V E + G L D + G + L L + +A I
Sbjct: 69 KLRHEKLVQLYAVVSEEPIYI-VTEYMSKGCLLDFLKGEMGKY---LRLPQLVDMAAQIA 124
Query: 61 HALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMGTLGY 120
+AY+ V R+ + + IL E V K+ DF L+ I + E + +
Sbjct: 125 SGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKW 181
Query: 121 CAPEYMRTGVFNEKSN 136
APE G F KS+
Sbjct: 182 TAPEAALYGRFTIKSD 197
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 62/138 (44%), Gaps = 13/138 (9%)
Query: 2 MSHNHILKLIGCCLETPIPILVFESVQYGTLWDRIL---GAPQPHFEPLLLKHRLKIAMD 58
+ H+ ++KL + PI I+ E + G+L D + G+ QP L + +
Sbjct: 240 LQHDKLVKLHAVVTKEPIYIIT-EFMAKGSLLDFLKSDEGSKQP------LPKLIDFSAQ 292
Query: 59 IVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMGTL 118
I +A++ R + R+ + + IL + V K+ DF L+ I + E + +
Sbjct: 293 IAEGMAFIE---QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPI 349
Query: 119 GYCAPEYMRTGVFNEKSN 136
+ APE + G F KS+
Sbjct: 350 KWTAPEAINFGSFTIKSD 367
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 51/127 (40%), Gaps = 24/127 (18%)
Query: 6 HILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHF--------------------E 45
+I+KL+G C L+FE + YG L + L + PH
Sbjct: 111 NIVKLLGVCAVGKPMCLLFEYMAYGDL-NEFLRSMSPHTVCSLSHSDLSTRARVSSPGPP 169
Query: 46 PLLLKHRLKIAMDIVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPE 105
PL +L IA + +AYL R V R+ T L E V K+ DF LS +I
Sbjct: 170 PLSCAEQLCIARQVAAGMAYLS---ERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYS 226
Query: 106 GETHITD 112
+ + D
Sbjct: 227 ADYYKAD 233
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 58/136 (42%), Gaps = 7/136 (5%)
Query: 1 QMSHNHILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIV 60
++ H +++L E PI I V E + G+L D + G + L L + +A I
Sbjct: 69 KLRHEKLVQLYAVVSEEPIYI-VTEYMSKGSLLDFLKGEMGKY---LRLPQLVDMAAQIA 124
Query: 61 HALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMGTLGY 120
+AY+ V R+ + IL E V K+ DF L+ I + E + +
Sbjct: 125 SGMAYVER---MNYVHRDLAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKW 181
Query: 121 CAPEYMRTGVFNEKSN 136
APE G F KS+
Sbjct: 182 TAPEAALYGRFTIKSD 197
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 40/74 (54%), Gaps = 7/74 (9%)
Query: 58 DIVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSL-SISIPEGETHITDTVMG 116
+I AL +LH + I++R+ K I+ N + KL DF L SI +G +T G
Sbjct: 129 EISMALGHLH---QKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGT--VTHXFCG 183
Query: 117 TLGYCAPE-YMRTG 129
T+ Y APE MR+G
Sbjct: 184 TIEYMAPEILMRSG 197
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/243 (21%), Positives = 102/243 (41%), Gaps = 23/243 (9%)
Query: 2 MSHNHILKLIGCCLETPIP--ILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDI 59
+ H++I+K G C L+ E + YG+L + + Q H E + L+ I
Sbjct: 71 LQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYL----QKHKERIDHIKLLQYTSQI 126
Query: 60 VHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGE--THITDTVMGT 117
+ YL G R + R+ T IL EN K+ DF L+ +P+ + + +
Sbjct: 127 CKGMEYL--GTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP 183
Query: 118 LGYCAPEYMRTGVFNEKSNXXXXXXXXXXXXTGWDVSDLVKDVHDLVCPFSEYLKNCFED 177
+ + APE + F+ S+ G + +L + P +E+++ D
Sbjct: 184 IFWYAPESLTESKFSVASDVWSF---------GVVLYELFTYIEKSKSPPAEFMRMIGND 234
Query: 178 NRFTEIVDHIV--VEDVSSIEKEQQLHASA-QVTFECIKDSPADRPSMVDVAKKLRQIYR 234
+ IV H++ +++ + + + EC ++ RPS D+A ++ QI
Sbjct: 235 KQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD 294
Query: 235 SLS 237
+++
Sbjct: 295 NMA 297
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/242 (19%), Positives = 97/242 (40%), Gaps = 34/242 (14%)
Query: 4 HNHILKLIGCCLETPIPILVF-ESVQYGTLWDRILGAPQPHFEP--------LLLKHRLK 54
H +++ L+G C + P++V E ++G L L + + F P L L+H +
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNL-STYLRSKRNEFVPYKDLYKDFLTLEHLIX 148
Query: 55 IAMDIVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHI-TDT 113
+ + + +L R + R+ IL +E+NV K+ DF L+ I + ++
Sbjct: 149 YSFQVAKGMEFLA---SRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGD 205
Query: 114 VMGTLGYCAPEYMRTGVFNEKSNXXXXXXXXXXXXTGWDVSDLVKDVHDLVCPFSEYLKN 173
L + APE + V+ +S+ W++ L + V E+ +
Sbjct: 206 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLL------WEIFSLGASPYPGVKIDEEFXRR 259
Query: 174 CFEDNRFTEIVDHIVVEDVSSIEKEQQLHASAQVTFECIKDSPADRPSMVDVAKKLRQIY 233
E R + D ++ E Q + +C P+ RP+ ++ + L +
Sbjct: 260 LKEGTR-------MRAPDYTTPEMYQTM-------LDCWHGEPSQRPTFSELVEHLGNLL 305
Query: 234 RS 235
++
Sbjct: 306 QA 307
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 59/148 (39%), Gaps = 20/148 (13%)
Query: 55 IAMDIVHALAYLHFGFP-------RP-IVFRNFKTSCILFNEENVAKLFDFSLSISI--- 103
+A + L+YLH P +P I R+FK+ +L + A L DF L++
Sbjct: 117 VAETMSRGLSYLHEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPG 176
Query: 104 -PEGETHITDTVMGTLGYCAPEYMRTGVFNEKSNXXXXXXXXXXXXTGWDVSDLVKD--- 159
P G+TH +GT Y APE + G N + + W++ K
Sbjct: 177 KPPGDTH---GQVGTRRYMAPEVLE-GAINFQRDAFLRIDMYAMGLVLWELVSRCKAADG 232
Query: 160 -VHDLVCPFSEYLKNCFEDNRFTEIVDH 186
V + + PF E + E+V H
Sbjct: 233 PVDEYMLPFEEEIGQHPSLEELQEVVVH 260
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 62/138 (44%), Gaps = 13/138 (9%)
Query: 2 MSHNHILKLIGCCLETPIPILVFESVQYGTLWDRIL---GAPQPHFEPLLLKHRLKIAMD 58
+ H+ ++KL + PI I+ E + G+L D + G+ QP L + +
Sbjct: 67 LQHDKLVKLHAVVTKEPIYIIT-EFMAKGSLLDFLKSDEGSKQP------LPKLIDFSAQ 119
Query: 59 IVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMGTL 118
I +A++ R + R+ + + IL + V K+ DF L+ I + E + +
Sbjct: 120 IAEGMAFIE---QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPI 176
Query: 119 GYCAPEYMRTGVFNEKSN 136
+ APE + G F KS+
Sbjct: 177 KWTAPEAINFGSFTIKSD 194
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 62/137 (45%), Gaps = 8/137 (5%)
Query: 1 QMSHNHILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIV 60
++ H ++++L+G C P ++ E + YG L D + + ++L L +A I
Sbjct: 63 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL---LYMATQIS 119
Query: 61 HALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMG-TLG 119
A+ YL + + R+ L E ++ K+ DF LS + G+T +
Sbjct: 120 SAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTXTAHAGAKFPIK 175
Query: 120 YCAPEYMRTGVFNEKSN 136
+ APE + F+ KS+
Sbjct: 176 WTAPESLAYNKFSIKSD 192
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 62/137 (45%), Gaps = 8/137 (5%)
Query: 1 QMSHNHILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIV 60
++ H ++++L+G C P ++ E + YG L D + + ++L L +A I
Sbjct: 70 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL---LYMATQIS 126
Query: 61 HALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMG-TLG 119
A+ YL + + R+ L E ++ K+ DF LS + G+T +
Sbjct: 127 SAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTXTAHAGAKFPIK 182
Query: 120 YCAPEYMRTGVFNEKSN 136
+ APE + F+ KS+
Sbjct: 183 WTAPESLAYNKFSIKSD 199
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 56/147 (38%), Gaps = 22/147 (14%)
Query: 4 HNHILKLIGCCLETPIPILVFESVQYGTLWD-----RILGAPQPHF-------EPLLLKH 51
H +I+ L+G C L E +G L D R+L P F L +
Sbjct: 82 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVL-ETDPAFAIANSTASTLSSQQ 140
Query: 52 RLKIAMDIVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHIT 111
L A D+ + YL + + RN IL E VAK+ DF LS G+
Sbjct: 141 LLHFAADVARGMDYLS---QKQFIHRNLAARNILVGENYVAKIADFGLS----RGQEVYV 193
Query: 112 DTVMGTL--GYCAPEYMRTGVFNEKSN 136
MG L + A E + V+ S+
Sbjct: 194 KKTMGRLPVRWMAIESLNYSVYTTNSD 220
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 62/137 (45%), Gaps = 8/137 (5%)
Query: 1 QMSHNHILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIV 60
++ H ++++L+G C P ++ E + YG L D + + ++L L +A I
Sbjct: 63 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL---LYMATQIS 119
Query: 61 HALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMG-TLG 119
A+ YL + + R+ L E ++ K+ DF LS + G+T +
Sbjct: 120 SAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTFTAHAGAKFPIK 175
Query: 120 YCAPEYMRTGVFNEKSN 136
+ APE + F+ KS+
Sbjct: 176 WTAPESLAYNKFSIKSD 192
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 63/140 (45%), Gaps = 14/140 (10%)
Query: 1 QMSHNHILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQ--PHFEPLLLKHRLKIAMD 58
Q+ + +I++LIG C + +LV E G L ++G + P L H++ + M
Sbjct: 392 QLDNPYIVRLIGVCQAEAL-MLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMK 450
Query: 59 IVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMGT- 117
+ ++H RN +L + AK+ DF LS ++ +++ T G
Sbjct: 451 YLEEKNFVH---------RNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKW 501
Query: 118 -LGYCAPEYMRTGVFNEKSN 136
L + APE + F+ +S+
Sbjct: 502 PLKWYAPECINFRKFSSRSD 521
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 52/108 (48%), Gaps = 13/108 (12%)
Query: 22 LVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIVHALAYLHFGFPRPIVFRNFKT 81
LV + V G L+DRI+ + F K + ++ A+ YLH IV R+ K
Sbjct: 97 LVMQLVSGGELFDRIV---EKGF--YTEKDASTLIRQVLDAVYYLH---RMGIVHRDLKP 148
Query: 82 SCILF---NEENVAKLFDFSLSISIPEGETHITDTVMGTLGYCAPEYM 126
+L+ +EE+ + DF LS EG+ + T GT GY APE +
Sbjct: 149 ENLLYYSQDEESKIMISDFGLSKM--EGKGDVMSTACGTPGYVAPEVL 194
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/253 (20%), Positives = 94/253 (37%), Gaps = 46/253 (18%)
Query: 1 QMSHNHILKLIGCCLETPIPILVFESVQYGTLW-----DRILGAP--------------Q 41
Q++H H++KL G C + +L+ E +YG+L R +G
Sbjct: 82 QVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDH 141
Query: 42 PHFEPLLLKHRLKIAMDIVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSI 101
P L + + A I + YL +V R+ IL E K+ DF LS
Sbjct: 142 PDERALTMGDLISFAWQISQGMQYLA---EMSLVHRDLAARNILVAEGRKMKISDFGLSR 198
Query: 102 SIPEGETHITDTVMGTL--GYCAPEYMRTGVFNEKSNXXXXXXXXXXXXTGWDVSDLVKD 159
+ E ++ + + G + + A E + ++ +S+ W++ L +
Sbjct: 199 DVYEEDSXVKRS-QGRIPVKWMAIESLFDHIYTTQSDVWSFGVLL------WEIVTLGGN 251
Query: 160 VHDLVCPFSEYLKNCFEDNRFTEIVDHIVVEDVSSIEKEQQLHASAQVTFECIKDSPADR 219
+ + P E L N + E D+ E ++ +C K P R
Sbjct: 252 PYPGIPP--ERLFNLLKTGHRMERPDNCSEE-------------MYRLMLQCWKQEPDKR 296
Query: 220 PSMVDVAKKLRQI 232
P D++K L ++
Sbjct: 297 PVFADISKDLEKM 309
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/253 (20%), Positives = 94/253 (37%), Gaps = 46/253 (18%)
Query: 1 QMSHNHILKLIGCCLETPIPILVFESVQYGTLW-----DRILGAP--------------Q 41
Q++H H++KL G C + +L+ E +YG+L R +G
Sbjct: 82 QVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDH 141
Query: 42 PHFEPLLLKHRLKIAMDIVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSI 101
P L + + A I + YL +V R+ IL E K+ DF LS
Sbjct: 142 PDERALTMGDLISFAWQISQGMQYLA---EMKLVHRDLAARNILVAEGRKMKISDFGLSR 198
Query: 102 SIPEGETHITDTVMGTL--GYCAPEYMRTGVFNEKSNXXXXXXXXXXXXTGWDVSDLVKD 159
+ E ++ + + G + + A E + ++ +S+ W++ L +
Sbjct: 199 DVYEEDSXVKRS-QGRIPVKWMAIESLFDHIYTTQSDVWSFGVLL------WEIVTLGGN 251
Query: 160 VHDLVCPFSEYLKNCFEDNRFTEIVDHIVVEDVSSIEKEQQLHASAQVTFECIKDSPADR 219
+ + P E L N + E D+ E ++ +C K P R
Sbjct: 252 PYPGIPP--ERLFNLLKTGHRMERPDNCSEE-------------MYRLMLQCWKQEPDKR 296
Query: 220 PSMVDVAKKLRQI 232
P D++K L ++
Sbjct: 297 PVFADISKDLEKM 309
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 48/114 (42%), Gaps = 22/114 (19%)
Query: 2 MSHNHILKLIGCCLETPIPILVFESVQYGTLWDRIL------------GAPQPHFEPLLL 49
+ H HI+K G C + I+VFE +++G L ++ L G P+ L L
Sbjct: 74 LQHEHIVKFYGVCGDGDPLIMVFEYMKHGDL-NKFLRAHGPDAMILVDGQPRQAKGELGL 132
Query: 50 KHRLKIAMDIVHALAYL---HFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLS 100
L IA I + YL HF V R+ T L + K+ DF +S
Sbjct: 133 SQMLHIASQIASGMVYLASQHF------VHRDLATRNCLVGANLLVKIGDFGMS 180
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 39/90 (43%), Gaps = 13/90 (14%)
Query: 54 KIAMDIVHALAYLHFGFPR------PIVFRNFKTSCILFNEENVAKLFDFSLSISI---- 103
++A + LAYLH PR I R+ + +L + + DF LS+ +
Sbjct: 115 RLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNR 174
Query: 104 ---PEGETHITDTVMGTLGYCAPEYMRTGV 130
P E + + +GT+ Y APE + V
Sbjct: 175 LVRPGEEDNAAISEVGTIRYMAPEVLEGAV 204
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 4/70 (5%)
Query: 58 DIVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLS-ISIPEGETHITDTVMG 116
+IV AL YLH + I+ R+ K IL NE+ ++ DF + + PE + ++ +G
Sbjct: 140 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVG 196
Query: 117 TLGYCAPEYM 126
T Y +PE +
Sbjct: 197 TAQYVSPELL 206
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 4/70 (5%)
Query: 58 DIVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLS-ISIPEGETHITDTVMG 116
+IV AL YLH + I+ R+ K IL NE+ ++ DF + + PE + ++ +G
Sbjct: 137 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVG 193
Query: 117 TLGYCAPEYM 126
T Y +PE +
Sbjct: 194 TAQYVSPELL 203
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 4/70 (5%)
Query: 58 DIVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLS-ISIPEGETHITDTVMG 116
+IV AL YLH + I+ R+ K IL NE+ ++ DF + + PE + ++ +G
Sbjct: 141 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVG 197
Query: 117 TLGYCAPEYM 126
T Y +PE +
Sbjct: 198 TAQYVSPELL 207
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 50 KHRLKIAM-DIVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGET 108
+H ++I + +IV AL +LH I++R+ K IL + L DF LS ET
Sbjct: 158 EHEVQIYVGEIVLALEHLH---KLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADET 214
Query: 109 HITDTVMGTLGYCAPEYMRTG 129
GT+ Y AP+ +R G
Sbjct: 215 ERAYDFCGTIEYMAPDIVRGG 235
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 57/129 (44%), Gaps = 12/129 (9%)
Query: 4 HNHILKLIGCCLETPIPI-LVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIVHA 62
H HI+KL + TP I +V E V G L+D I + L K ++ I+
Sbjct: 75 HPHIIKLYQV-ISTPSDIFMVMEYVSGGELFDYICKNGR-----LDEKESRRLFQQILSG 128
Query: 63 LAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMGTLGYCA 122
+ Y H +V R+ K +L + AK+ DF LS + +GE G+ Y A
Sbjct: 129 VDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE--FLRXSCGSPNYAA 183
Query: 123 PEYMRTGVF 131
PE + ++
Sbjct: 184 PEVISGRLY 192
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 65/145 (44%), Gaps = 18/145 (12%)
Query: 3 SHNHILKLIGCCLET-----PIPILVFESVQYGT-----LWDRILGAPQPHFEPLLLKHR 52
SH ++++L+G C+E P P+++ ++YG L+ R+ P+ H L+
Sbjct: 94 SHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPK-HIP---LQTL 149
Query: 53 LKIAMDIVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITD 112
LK +DI + YL R + R+ + ++ + DF LS I G+ +
Sbjct: 150 LKFMVDIALGMEYLS---NRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQG 206
Query: 113 TVMGT-LGYCAPEYMRTGVFNEKSN 136
+ + + A E + V+ KS+
Sbjct: 207 RIAKMPVKWIAIESLADRVYTSKSD 231
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/133 (22%), Positives = 54/133 (40%), Gaps = 11/133 (8%)
Query: 2 MSHNHILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIVH 61
+ H +IL+L G + L+ E GT++ + + ++ +
Sbjct: 91 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-----KLSKFDEQRTATYITELAN 145
Query: 62 ALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMGTLGYC 121
AL+Y H + ++ R+ K +L K+ DF S+ P D + GTL Y
Sbjct: 146 ALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---DDLCGTLDYL 199
Query: 122 APEYMRTGVFNEK 134
PE + + +EK
Sbjct: 200 PPEMIEGRMHDEK 212
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Query: 58 DIVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLS-ISIPEGETHITDTVMG 116
+IV AL YLH + I+ R+ K IL NE+ ++ DF + + PE + + +G
Sbjct: 138 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVG 194
Query: 117 TLGYCAPEYM 126
T Y +PE +
Sbjct: 195 TAQYVSPELL 204
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 54/132 (40%), Gaps = 13/132 (9%)
Query: 2 MSHNHILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAM---D 58
+ H +I++ +G E + E V G+L + P L + I
Sbjct: 76 LKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGP-----LKDNEQTIGFYTKQ 130
Query: 59 IVHALAYLHFGFPRPIVFRNFKTSCILFNE-ENVAKLFDFSLSISIPEGETHITDTVMGT 117
I+ L YLH IV R+ K +L N V K+ DF S + G T+T GT
Sbjct: 131 ILEGLKYLH---DNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLA-GINPCTETFTGT 186
Query: 118 LGYCAPEYMRTG 129
L Y APE + G
Sbjct: 187 LQYMAPEIIDKG 198
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 65/140 (46%), Gaps = 14/140 (10%)
Query: 1 QMSHNHILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQ--PHFEPLLLKHRLKIAMD 58
Q+ + +I++LIG C + +LV E G L ++G + P L H++ + M
Sbjct: 66 QLDNPYIVRLIGVCQAEAL-MLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMK 124
Query: 59 IVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMGT- 117
+ ++H R + RN +L + AK+ DF LS ++ +++ T G
Sbjct: 125 YLEEKNFVH----RDLAARN-----VLLVNRHYAKISDFGLSKALGADDSYYTARSAGKW 175
Query: 118 -LGYCAPEYMRTGVFNEKSN 136
L + APE + F+ +S+
Sbjct: 176 PLKWYAPECINFRKFSSRSD 195
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 55/136 (40%), Gaps = 8/136 (5%)
Query: 1 QMSHNHILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIV 60
Q H HI+KLIG E P+ I + E G L + Q L L + A +
Sbjct: 64 QFDHPHIVKLIGVITENPVWI-IMELCTLGELRSFL----QVRKYSLDLASLILYAYQLS 118
Query: 61 HALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMGTLGY 120
ALAYL + V R+ +L + + KL DF LS + + + + +
Sbjct: 119 TALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKW 175
Query: 121 CAPEYMRTGVFNEKSN 136
APE + F S+
Sbjct: 176 MAPESINFRRFTSASD 191
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 61/136 (44%), Gaps = 8/136 (5%)
Query: 2 MSHNHILKLIGCCL-ETPIPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIV 60
+ H+ +++L E PI I+ E + G+L D + +LL + + I
Sbjct: 64 LQHDKLVRLYAVVTKEEPIYIIT-EFMAKGSLLDFL---KSDEGGKVLLPKLIDFSAQIA 119
Query: 61 HALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMGTLGY 120
+AY+ + + R+ + + +L +E + K+ DF L+ I + E + + +
Sbjct: 120 EGMAYIE---RKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKW 176
Query: 121 CAPEYMRTGVFNEKSN 136
APE + G F KSN
Sbjct: 177 TAPEAINFGCFTIKSN 192
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 55/136 (40%), Gaps = 8/136 (5%)
Query: 1 QMSHNHILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIV 60
Q H HI+KLIG E P+ I + E G L + Q L L + A +
Sbjct: 72 QFDHPHIVKLIGVITENPVWI-IMELCTLGELRSFL----QVRKYSLDLASLILYAYQLS 126
Query: 61 HALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMGTLGY 120
ALAYL + V R+ +L + + KL DF LS + + + + +
Sbjct: 127 TALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKW 183
Query: 121 CAPEYMRTGVFNEKSN 136
APE + F S+
Sbjct: 184 MAPESINFRRFTSASD 199
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 93/236 (39%), Gaps = 35/236 (14%)
Query: 1 QMSHNHILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHF--EPLLLKHRL--KIA 56
Q++H +++K +E +V E G L I HF + L+ R K
Sbjct: 88 QLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMI-----KHFKKQKRLIPERTVWKYF 142
Query: 57 MDIVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMG 116
+ + AL ++H R ++ R+ K + + V KL D L +T +++G
Sbjct: 143 VQLCSALEHMH---SRRVMHRDIKPANVFITATGVVKLGDLGLG-RFFSSKTTAAHSLVG 198
Query: 117 TLGYCAPEYMRTGVFNEKSNXXXXXXXXXXXXTGWDVSDLVKDVHDLVCPFSEYLKNCFE 176
T Y +PE + +N KS+ W + L+ ++ L PF N +
Sbjct: 199 TPYYMSPERIHENGYNFKSDI-------------WSLGCLLYEMAALQSPFYGDKMNLYS 245
Query: 177 DNRFTEIVDHIVVEDVSSIEKEQQLHASAQVTFECIKDSPADRPSMV---DVAKKL 229
+ E D+ + E+ +QL CI P RP + DVAK++
Sbjct: 246 LCKKIEQCDYPPLPSDHYSEELRQL------VNMCINPDPEKRPDVTYVYDVAKRM 295
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 48/242 (19%), Positives = 97/242 (40%), Gaps = 34/242 (14%)
Query: 4 HNHILKLIGCCLETPIPILVF-ESVQYGTLWDRILGAPQPHFEP--------LLLKHRLK 54
H +++ L+G C + P++V E ++G L L + + F P L L+H +
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNL-STYLRSKRNEFVPYKDLYKDFLTLEHLIC 148
Query: 55 IAMDIVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDT- 113
+ + + +L R + R+ IL +E+NV K+ DF L+ I + ++
Sbjct: 149 YSFQVAKGMEFLA---SRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGD 205
Query: 114 VMGTLGYCAPEYMRTGVFNEKSNXXXXXXXXXXXXTGWDVSDLVKDVHDLVCPFSEYLKN 173
L + APE + V+ +S+ W++ L + V E+ +
Sbjct: 206 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLL------WEIFSLGASPYPGVKIDEEFCRR 259
Query: 174 CFEDNRFTEIVDHIVVEDVSSIEKEQQLHASAQVTFECIKDSPADRPSMVDVAKKLRQIY 233
E R + D ++ E Q + +C P+ RP+ ++ + L +
Sbjct: 260 LKEGTR-------MRAPDYTTPEMYQTM-------LDCWHGEPSQRPTFSELVEHLGNLL 305
Query: 234 RS 235
++
Sbjct: 306 QA 307
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 55/136 (40%), Gaps = 8/136 (5%)
Query: 1 QMSHNHILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIV 60
Q H HI+KLIG E P+ I + E G L + Q L L + A +
Sbjct: 69 QFDHPHIVKLIGVITENPVWI-IMELCTLGELRSFL----QVRKYSLDLASLILYAYQLS 123
Query: 61 HALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMGTLGY 120
ALAYL + V R+ +L + + KL DF LS + + + + +
Sbjct: 124 TALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKW 180
Query: 121 CAPEYMRTGVFNEKSN 136
APE + F S+
Sbjct: 181 MAPESINFRRFTSASD 196
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 55/136 (40%), Gaps = 8/136 (5%)
Query: 1 QMSHNHILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIV 60
Q H HI+KLIG E P+ I + E G L + Q L L + A +
Sbjct: 67 QFDHPHIVKLIGVITENPVWI-IMELCTLGELRSFL----QVRKYSLDLASLILYAYQLS 121
Query: 61 HALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMGTLGY 120
ALAYL + V R+ +L + + KL DF LS + + + + +
Sbjct: 122 TALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKW 178
Query: 121 CAPEYMRTGVFNEKSN 136
APE + F S+
Sbjct: 179 MAPESINFRRFTSASD 194
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 55/136 (40%), Gaps = 8/136 (5%)
Query: 1 QMSHNHILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIV 60
Q H HI+KLIG E P+ I + E G L + Q L L + A +
Sbjct: 70 QFDHPHIVKLIGVITENPVWI-IMELCTLGELRSFL----QVRKYSLDLASLILYAYQLS 124
Query: 61 HALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMGTLGY 120
ALAYL + V R+ +L + + KL DF LS + + + + +
Sbjct: 125 TALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKW 181
Query: 121 CAPEYMRTGVFNEKSN 136
APE + F S+
Sbjct: 182 MAPESINFRRFTSASD 197
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 55/136 (40%), Gaps = 8/136 (5%)
Query: 1 QMSHNHILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIV 60
Q H HI+KLIG E P+ I + E G L + Q L L + A +
Sbjct: 67 QFDHPHIVKLIGVITENPVWI-IMELCTLGELRSFL----QVRKYSLDLASLILYAYQLS 121
Query: 61 HALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMGTLGY 120
ALAYL + V R+ +L + + KL DF LS + + + + +
Sbjct: 122 TALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKW 178
Query: 121 CAPEYMRTGVFNEKSN 136
APE + F S+
Sbjct: 179 MAPESINFRRFTSASD 194
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Query: 58 DIVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLS-ISIPEGETHITDTVMG 116
+IV AL YLH + I+ R+ K IL NE+ ++ DF + + PE + + +G
Sbjct: 140 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 196
Query: 117 TLGYCAPEYM 126
T Y +PE +
Sbjct: 197 TAQYVSPELL 206
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Query: 58 DIVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLS-ISIPEGETHITDTVMG 116
+IV AL YLH + I+ R+ K IL NE+ ++ DF + + PE + + +G
Sbjct: 116 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 172
Query: 117 TLGYCAPEYM 126
T Y +PE +
Sbjct: 173 TAQYVSPELL 182
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Query: 58 DIVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLS-ISIPEGETHITDTVMG 116
+IV AL YLH + I+ R+ K IL NE+ ++ DF + + PE + + +G
Sbjct: 117 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 173
Query: 117 TLGYCAPEYM 126
T Y +PE +
Sbjct: 174 TAQYVSPELL 183
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 55/136 (40%), Gaps = 8/136 (5%)
Query: 1 QMSHNHILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIV 60
Q H HI+KLIG E P+ I + E G L + Q L L + A +
Sbjct: 95 QFDHPHIVKLIGVITENPVWI-IMELCTLGELRSFL----QVRKYSLDLASLILYAYQLS 149
Query: 61 HALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMGTLGY 120
ALAYL + V R+ +L + + KL DF LS + + + + +
Sbjct: 150 TALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKW 206
Query: 121 CAPEYMRTGVFNEKSN 136
APE + F S+
Sbjct: 207 MAPESINFRRFTSASD 222
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Query: 58 DIVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLS-ISIPEGETHITDTVMG 116
+IV AL YLH + I+ R+ K IL NE+ ++ DF + + PE + + +G
Sbjct: 138 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 194
Query: 117 TLGYCAPEYM 126
T Y +PE +
Sbjct: 195 TAQYVSPELL 204
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Query: 58 DIVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLS-ISIPEGETHITDTVMG 116
+IV AL YLH + I+ R+ K IL NE+ ++ DF + + PE + + +G
Sbjct: 140 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 196
Query: 117 TLGYCAPEYM 126
T Y +PE +
Sbjct: 197 TAQYVSPELL 206
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Query: 58 DIVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLS-ISIPEGETHITDTVMG 116
+IV AL YLH + I+ R+ K IL NE+ ++ DF + + PE + + +G
Sbjct: 138 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 194
Query: 117 TLGYCAPEYM 126
T Y +PE +
Sbjct: 195 TAQYVSPELL 204
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Query: 58 DIVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLS-ISIPEGETHITDTVMG 116
+IV AL YLH + I+ R+ K IL NE+ ++ DF + + PE + + +G
Sbjct: 140 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 196
Query: 117 TLGYCAPEYM 126
T Y +PE +
Sbjct: 197 TAQYVSPELL 206
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 37.0 bits (84), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Query: 58 DIVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLS-ISIPEGETHITDTVMG 116
+IV AL YLH + I+ R+ K IL NE+ ++ DF + + PE + + +G
Sbjct: 115 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 171
Query: 117 TLGYCAPEYM 126
T Y +PE +
Sbjct: 172 TAQYVSPELL 181
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Query: 58 DIVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLS-ISIPEGETHITDTVMG 116
+IV AL YLH + I+ R+ K IL NE+ ++ DF + + PE + + +G
Sbjct: 140 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 196
Query: 117 TLGYCAPEYM 126
T Y +PE +
Sbjct: 197 TAQYVSPELL 206
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 57/133 (42%), Gaps = 11/133 (8%)
Query: 2 MSHNHILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIVH 61
+ H +IL+L G + L+ E GT++ + + F+ + ++ +
Sbjct: 68 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDE---QRTATYITELAN 122
Query: 62 ALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMGTLGYC 121
AL+Y H + ++ R+ K +L K+ DF S+ P D + GTL Y
Sbjct: 123 ALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---DDLCGTLDYL 176
Query: 122 APEYMRTGVFNEK 134
PE + + +EK
Sbjct: 177 PPEMIEGRMHDEK 189
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Query: 58 DIVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLS-ISIPEGETHITDTVMG 116
+IV AL YLH + I+ R+ K IL NE+ ++ DF + + PE + + +G
Sbjct: 138 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 194
Query: 117 TLGYCAPEYM 126
T Y +PE +
Sbjct: 195 TAQYVSPELL 204
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Query: 58 DIVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLS-ISIPEGETHITDTVMG 116
+IV AL YLH + I+ R+ K IL NE+ ++ DF + + PE + + +G
Sbjct: 141 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 197
Query: 117 TLGYCAPEYM 126
T Y +PE +
Sbjct: 198 TAQYVSPELL 207
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 54/132 (40%), Gaps = 13/132 (9%)
Query: 2 MSHNHILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAM---D 58
+ H +I++ +G E + E V G+L + P L + I
Sbjct: 62 LKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGP-----LKDNEQTIGFYTKQ 116
Query: 59 IVHALAYLHFGFPRPIVFRNFKTSCILFNE-ENVAKLFDFSLSISIPEGETHITDTVMGT 117
I+ L YLH IV R+ K +L N V K+ DF S + G T+T GT
Sbjct: 117 ILEGLKYLH---DNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLA-GINPCTETFTGT 172
Query: 118 LGYCAPEYMRTG 129
L Y APE + G
Sbjct: 173 LQYMAPEIIDKG 184
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Query: 58 DIVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLS-ISIPEGETHITDTVMG 116
+IV AL YLH + I+ R+ K IL NE+ ++ DF + + PE + + +G
Sbjct: 122 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 178
Query: 117 TLGYCAPEYM 126
T Y +PE +
Sbjct: 179 TAQYVSPELL 188
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Query: 58 DIVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLS-ISIPEGETHITDTVMG 116
+IV AL YLH + I+ R+ K IL NE+ ++ DF + + PE + + +G
Sbjct: 140 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 196
Query: 117 TLGYCAPEYM 126
T Y +PE +
Sbjct: 197 TAQYVSPELL 206
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Query: 58 DIVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLS-ISIPEGETHITDTVMG 116
+IV AL YLH + I+ R+ K IL NE+ ++ DF + + PE + + +G
Sbjct: 118 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 174
Query: 117 TLGYCAPEYM 126
T Y +PE +
Sbjct: 175 TAQYVSPELL 184
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 55/136 (40%), Gaps = 8/136 (5%)
Query: 1 QMSHNHILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIV 60
Q H HI+KLIG E P+ I + E G L + Q L L + A +
Sbjct: 447 QFDHPHIVKLIGVITENPVWI-IMELCTLGELRSFL----QVRKFSLDLASLILYAYQLS 501
Query: 61 HALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMGTLGY 120
ALAYL + V R+ +L + + KL DF LS + + + + +
Sbjct: 502 TALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKW 558
Query: 121 CAPEYMRTGVFNEKSN 136
APE + F S+
Sbjct: 559 MAPESINFRRFTSASD 574
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Query: 58 DIVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLS-ISIPEGETHITDTVMG 116
+IV AL YLH + I+ R+ K IL NE+ ++ DF + + PE + + +G
Sbjct: 143 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 199
Query: 117 TLGYCAPEYM 126
T Y +PE +
Sbjct: 200 TAQYVSPELL 209
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Query: 58 DIVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLS-ISIPEGETHITDTVMG 116
+IV AL YLH + I+ R+ K IL NE+ ++ DF + + PE + + +G
Sbjct: 145 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 201
Query: 117 TLGYCAPEYM 126
T Y +PE +
Sbjct: 202 TAQYVSPELL 211
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Query: 58 DIVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLS-ISIPEGETHITDTVMG 116
+IV AL YLH + I+ R+ K IL NE+ ++ DF + + PE + + +G
Sbjct: 137 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 193
Query: 117 TLGYCAPEYM 126
T Y +PE +
Sbjct: 194 TAQYVSPELL 203
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 37.0 bits (84), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/133 (22%), Positives = 54/133 (40%), Gaps = 11/133 (8%)
Query: 2 MSHNHILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIVH 61
+ H +IL+L G + L+ E GT++ + + ++ +
Sbjct: 82 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTATYITELAN 136
Query: 62 ALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMGTLGYC 121
AL+Y H + ++ R+ K +L K+ DF S+ P T+ GTL Y
Sbjct: 137 ALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---TTLCGTLDYL 190
Query: 122 APEYMRTGVFNEK 134
PE + + +EK
Sbjct: 191 PPEMIEGRMHDEK 203
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 37.0 bits (84), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 56/147 (38%), Gaps = 22/147 (14%)
Query: 4 HNHILKLIGCCLETPIPILVFESVQYGTLWD-----RILGAPQPHF-------EPLLLKH 51
H +I+ L+G C L E +G L D R+L P F L +
Sbjct: 85 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVL-ETDPAFAIANSTASTLSSQQ 143
Query: 52 RLKIAMDIVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHIT 111
L A D+ + YL + + R+ IL E VAK+ DF LS G+
Sbjct: 144 LLHFAADVARGMDYLS---QKQFIHRDLAARNILVGENYVAKIADFGLS----RGQEVYV 196
Query: 112 DTVMGTL--GYCAPEYMRTGVFNEKSN 136
MG L + A E + V+ S+
Sbjct: 197 KKTMGRLPVRWMAIESLNYSVYTTNSD 223
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 37.0 bits (84), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 56/147 (38%), Gaps = 22/147 (14%)
Query: 4 HNHILKLIGCCLETPIPILVFESVQYGTLWD-----RILGAPQPHF-------EPLLLKH 51
H +I+ L+G C L E +G L D R+L P F L +
Sbjct: 75 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVL-ETDPAFAIANSTASTLSSQQ 133
Query: 52 RLKIAMDIVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHIT 111
L A D+ + YL + + R+ IL E VAK+ DF LS G+
Sbjct: 134 LLHFAADVARGMDYLS---QKQFIHRDLAARNILVGENYVAKIADFGLS----RGQEVYV 186
Query: 112 DTVMGTL--GYCAPEYMRTGVFNEKSN 136
MG L + A E + V+ S+
Sbjct: 187 KKTMGRLPVRWMAIESLNYSVYTTNSD 213
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 37.0 bits (84), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/133 (22%), Positives = 54/133 (40%), Gaps = 11/133 (8%)
Query: 2 MSHNHILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIVH 61
+ H +IL+L G + L+ E GT++ + + ++ +
Sbjct: 70 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTATYITELAN 124
Query: 62 ALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMGTLGYC 121
AL+Y H + ++ R+ K +L K+ DF S+ P T+ GTL Y
Sbjct: 125 ALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---TTLCGTLDYL 178
Query: 122 APEYMRTGVFNEK 134
PE + + +EK
Sbjct: 179 PPEMIEGRMHDEK 191
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 37.0 bits (84), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 37/72 (51%), Gaps = 6/72 (8%)
Query: 56 AMDIVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSL-SISIPEGETHITDTV 114
+IV AL YLH R +V+R+ K ++ +++ K+ DF L I +G T T
Sbjct: 111 GAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT--MKTF 165
Query: 115 MGTLGYCAPEYM 126
GT Y APE +
Sbjct: 166 CGTPEYLAPEVL 177
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 37.0 bits (84), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 57/133 (42%), Gaps = 11/133 (8%)
Query: 2 MSHNHILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIVH 61
+ H +IL+L G + L+ E GT++ + + F+ + ++ +
Sbjct: 68 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDE---QRTATYITELAN 122
Query: 62 ALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMGTLGYC 121
AL+Y H + ++ R+ K +L K+ DF S+ P T+ GTL Y
Sbjct: 123 ALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---TTLCGTLDYL 176
Query: 122 APEYMRTGVFNEK 134
PE + + +EK
Sbjct: 177 PPEMIEGRMHDEK 189
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 37.0 bits (84), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 37/72 (51%), Gaps = 6/72 (8%)
Query: 56 AMDIVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSL-SISIPEGETHITDTV 114
+IV AL YLH R +V+R+ K ++ +++ K+ DF L I +G T T
Sbjct: 114 GAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT--MKTF 168
Query: 115 MGTLGYCAPEYM 126
GT Y APE +
Sbjct: 169 CGTPEYLAPEVL 180
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 37.0 bits (84), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 37/72 (51%), Gaps = 6/72 (8%)
Query: 56 AMDIVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSL-SISIPEGETHITDTV 114
+IV AL YLH R +V+R+ K ++ +++ K+ DF L I +G T T
Sbjct: 111 GAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT--MKTF 165
Query: 115 MGTLGYCAPEYM 126
GT Y APE +
Sbjct: 166 CGTPEYLAPEVL 177
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 36.6 bits (83), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 57/133 (42%), Gaps = 11/133 (8%)
Query: 2 MSHNHILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIVH 61
+ H +IL+L G + L+ E GT++ + + F+ + ++ +
Sbjct: 69 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSR--FDE---QRTATYITELAN 123
Query: 62 ALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMGTLGYC 121
AL+Y H + ++ R+ K +L K+ DF S+ P T+ GTL Y
Sbjct: 124 ALSYCH---SKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRR---TTLCGTLDYL 177
Query: 122 APEYMRTGVFNEK 134
PE + + +EK
Sbjct: 178 PPEMIEGRMHDEK 190
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 36.6 bits (83), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 30/133 (22%), Positives = 54/133 (40%), Gaps = 11/133 (8%)
Query: 2 MSHNHILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIVH 61
+ H +IL+L G + L+ E GT++ + + ++ +
Sbjct: 91 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-----KLSKFDEQRTATYITELAN 145
Query: 62 ALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMGTLGYC 121
AL+Y H + ++ R+ K +L K+ DF S+ P T+ GTL Y
Sbjct: 146 ALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---TTLCGTLDYL 199
Query: 122 APEYMRTGVFNEK 134
PE + + +EK
Sbjct: 200 PPEMIEGRMHDEK 212
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 36.6 bits (83), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 30/133 (22%), Positives = 54/133 (40%), Gaps = 11/133 (8%)
Query: 2 MSHNHILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIVH 61
+ H +IL+L G + L+ E GT++ + + ++ +
Sbjct: 65 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTATYITELAN 119
Query: 62 ALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMGTLGYC 121
AL+Y H + ++ R+ K +L K+ DF S+ P T+ GTL Y
Sbjct: 120 ALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---TTLCGTLDYL 173
Query: 122 APEYMRTGVFNEK 134
PE + + +EK
Sbjct: 174 PPEMIEGRMHDEK 186
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 36.6 bits (83), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 48/244 (19%), Positives = 96/244 (39%), Gaps = 36/244 (14%)
Query: 4 HNHILKLIGCCLETPIPILVF-ESVQYGTLWDRILGAPQPHFEP----------LLLKHR 52
H +++ L+G C + P++V E ++G L L + + F P L L+H
Sbjct: 92 HLNVVNLLGACTKPGGPLMVIVEFCKFGNL-STYLRSKRNEFVPYKPEDLYKDFLTLEHL 150
Query: 53 LKIAMDIVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHI-T 111
+ + + + +L R + R+ IL +E+NV K+ DF L+ I + +
Sbjct: 151 IXYSFQVAKGMEFLA---SRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRK 207
Query: 112 DTVMGTLGYCAPEYMRTGVFNEKSNXXXXXXXXXXXXTGWDVSDLVKDVHDLVCPFSEYL 171
L + APE + V+ +S+ W++ L + V E+
Sbjct: 208 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLL------WEIFSLGASPYPGVKIDEEFC 261
Query: 172 KNCFEDNRFTEIVDHIVVEDVSSIEKEQQLHASAQVTFECIKDSPADRPSMVDVAKKLRQ 231
+ E R + D ++ E Q + +C P+ RP+ ++ + L
Sbjct: 262 RRLKEGTR-------MRAPDYTTPEMYQTM-------LDCWHGEPSQRPTFSELVEHLGN 307
Query: 232 IYRS 235
+ ++
Sbjct: 308 LLQA 311
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 36.6 bits (83), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 57/131 (43%), Gaps = 18/131 (13%)
Query: 1 QMSHNHILKLIGCCLETPIPILVFESVQYGTLWDRIL--GAPQPHFEPLLLKHRLKIAMD 58
++ H +I+ L T LV + V G L+DRIL G L+++
Sbjct: 62 KIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQ------- 114
Query: 59 IVHALAYLHFGFPRPIVFRNFKTSCILF---NEENVAKLFDFSLSISIPEGETHITDTVM 115
++ A+ YLH IV R+ K +L+ E + + DF LS G I T
Sbjct: 115 VLSAVKYLH---ENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNG---IMSTAC 168
Query: 116 GTLGYCAPEYM 126
GT GY APE +
Sbjct: 169 GTPGYVAPEVL 179
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 36.6 bits (83), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 57/133 (42%), Gaps = 11/133 (8%)
Query: 2 MSHNHILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIVH 61
+ H +IL+L G + L+ E GT++ + + F+ + ++ +
Sbjct: 64 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDE---QRTATYITELAN 118
Query: 62 ALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMGTLGYC 121
AL+Y H + ++ R+ K +L K+ DF S+ P T+ GTL Y
Sbjct: 119 ALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---TTLCGTLDYL 172
Query: 122 APEYMRTGVFNEK 134
PE + + +EK
Sbjct: 173 PPEMIEGRMHDEK 185
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 36.6 bits (83), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 57/133 (42%), Gaps = 11/133 (8%)
Query: 2 MSHNHILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIVH 61
+ H +IL+L G + L+ E GT++ + + F+ + ++ +
Sbjct: 62 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDE---QRTATYITELAN 116
Query: 62 ALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMGTLGYC 121
AL+Y H + ++ R+ K +L K+ DF S+ P T+ GTL Y
Sbjct: 117 ALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---TTLCGTLDYL 170
Query: 122 APEYMRTGVFNEK 134
PE + + +EK
Sbjct: 171 PPEMIEGRMHDEK 183
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 36.6 bits (83), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 57/133 (42%), Gaps = 11/133 (8%)
Query: 2 MSHNHILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIVH 61
+ H +IL+L G + L+ E GT++ + + F+ + ++ +
Sbjct: 68 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDE---QRTATYITELAN 122
Query: 62 ALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMGTLGYC 121
AL+Y H + ++ R+ K +L K+ DF S+ P T+ GTL Y
Sbjct: 123 ALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---TTLCGTLDYL 176
Query: 122 APEYMRTGVFNEK 134
PE + + +EK
Sbjct: 177 PPEMIEGRMHDEK 189
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 36.6 bits (83), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 42/82 (51%), Gaps = 4/82 (4%)
Query: 55 IAMDIVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTV 114
I +I+ L YLH + R+ K + +L +E KL DF ++ + + + +T
Sbjct: 109 ILREILKGLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIK-RNTF 164
Query: 115 MGTLGYCAPEYMRTGVFNEKSN 136
+GT + APE ++ ++ K++
Sbjct: 165 VGTPFWMAPEVIKQSAYDSKAD 186
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 36.6 bits (83), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 30/133 (22%), Positives = 53/133 (39%), Gaps = 11/133 (8%)
Query: 2 MSHNHILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIVH 61
+ H +IL+L G + L+ E GT++ + + ++ +
Sbjct: 70 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTATYITELAN 124
Query: 62 ALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMGTLGYC 121
AL+Y H + ++ R+ K +L K+ DF S+ P T+ GTL Y
Sbjct: 125 ALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---TTLCGTLDYL 178
Query: 122 APEYMRTGVFNEK 134
PE + +EK
Sbjct: 179 PPEXIEGRXHDEK 191
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 36.6 bits (83), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 55/136 (40%), Gaps = 8/136 (5%)
Query: 1 QMSHNHILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIV 60
Q H HI+KLIG E P+ I + E G L + Q L L + A +
Sbjct: 447 QFDHPHIVKLIGVITENPVWI-IMELCTLGELRSFL----QVRKFSLDLASLILYAYQLS 501
Query: 61 HALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMGTLGY 120
ALAYL + V R+ +L + + KL DF LS + + + + +
Sbjct: 502 TALAYLE---SKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKW 558
Query: 121 CAPEYMRTGVFNEKSN 136
APE + F S+
Sbjct: 559 MAPESINFRRFTSASD 574
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 36.6 bits (83), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 57/133 (42%), Gaps = 11/133 (8%)
Query: 2 MSHNHILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIVH 61
+ H +IL+L G + L+ E GT++ + + F+ + ++ +
Sbjct: 69 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDE---QRTATYITELAN 123
Query: 62 ALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMGTLGYC 121
AL+Y H + ++ R+ K +L K+ DF S+ P T+ GTL Y
Sbjct: 124 ALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---TTLCGTLDYL 177
Query: 122 APEYMRTGVFNEK 134
PE + + +EK
Sbjct: 178 PPEMIEGRMHDEK 190
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 36.2 bits (82), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 59/136 (43%), Gaps = 7/136 (5%)
Query: 1 QMSHNHILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIV 60
++ H+ +++L E PI I V E + G+L D + L L + + +A +
Sbjct: 60 KLKHDKLVQLYAVVSEEPIYI-VTEYMNKGSLLDFLKDG---EGRALKLPNLVDMAAQVA 115
Query: 61 HALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMGTLGY 120
+AY+ + R+ +++ IL + K+ DF L+ I + E + +
Sbjct: 116 AGMAYIER---MNYIHRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKW 172
Query: 121 CAPEYMRTGVFNEKSN 136
APE G F KS+
Sbjct: 173 TAPEAALYGRFTIKSD 188
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 36.2 bits (82), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 61/135 (45%), Gaps = 12/135 (8%)
Query: 2 MSHNHILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIVH 61
+ H +I++L E L+F+ V G L++ I+ + ++ H ++ I+
Sbjct: 67 LKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVA--REYYSEADASHCIQ---QILE 121
Query: 62 ALAYLHFGFPRPIVFRNFKTSCILFNEE---NVAKLFDFSLSISIPEGETHITDTVMGTL 118
A+ + H +V RN K +L + KL DF L+I + EGE GT
Sbjct: 122 AVLHCH---QMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEV-EGEQQAWFGFAGTP 177
Query: 119 GYCAPEYMRTGVFNE 133
GY +PE +R + +
Sbjct: 178 GYLSPEVLRKDPYGK 192
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 36.2 bits (82), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 55/136 (40%), Gaps = 8/136 (5%)
Query: 1 QMSHNHILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIV 60
Q H HI+KLIG E P+ I + E G L + Q L L + A +
Sbjct: 67 QFDHPHIVKLIGVITENPVWI-IMELCTLGELRSFL----QVRKFSLDLASLILYAYQLS 121
Query: 61 HALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMGTLGY 120
ALAYL + V R+ +L + + KL DF LS + + + + +
Sbjct: 122 TALAYLE---SKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKW 178
Query: 121 CAPEYMRTGVFNEKSN 136
APE + F S+
Sbjct: 179 MAPESINFRRFTSASD 194
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 36.2 bits (82), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 62/135 (45%), Gaps = 12/135 (8%)
Query: 2 MSHNHILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIVH 61
+ H++I++L E LVF+ V G L++ I+ + ++ H ++ I+
Sbjct: 60 LKHSNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVA--REYYSEADASHCIQ---QILE 114
Query: 62 ALAYLHFGFPRPIVFRNFKTSCILFNEE---NVAKLFDFSLSISIPEGETHITDTVMGTL 118
A+ + H +V R+ K +L + KL DF L+I + +G+ GT
Sbjct: 115 AVLHCH---QMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEV-QGDQQAWFGFAGTP 170
Query: 119 GYCAPEYMRTGVFNE 133
GY +PE +R + +
Sbjct: 171 GYLSPEVLRKEAYGK 185
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 36.2 bits (82), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 45/96 (46%), Gaps = 19/96 (19%)
Query: 54 KIAMDIVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSL-------------- 99
++ I+ AL+Y+H + I+ RN K I +E K+ DF L
Sbjct: 120 RLFRQILEALSYIH---SQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLD 176
Query: 100 SISIPEGETHITDTVMGTLGYCAPEYMR-TGVFNEK 134
S ++P ++T + +GT Y A E + TG +NEK
Sbjct: 177 SQNLPGSSDNLT-SAIGTAXYVATEVLDGTGHYNEK 211
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 36.2 bits (82), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 31/136 (22%), Positives = 61/136 (44%), Gaps = 8/136 (5%)
Query: 2 MSHNHILKLIGCCL-ETPIPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIV 60
+ H+ +++L E PI I+ E + G+L D + +LL + + I
Sbjct: 65 LQHDKLVRLYAVVTREEPIYIIT-EYMAKGSLLDFL---KSDEGGKVLLPKLIDFSAQIA 120
Query: 61 HALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMGTLGY 120
+AY+ + + R+ + + +L +E + K+ DF L+ I + E + + +
Sbjct: 121 EGMAYIE---RKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKW 177
Query: 121 CAPEYMRTGVFNEKSN 136
APE + G F KS+
Sbjct: 178 TAPEAINFGCFTIKSD 193
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 36.2 bits (82), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 36/72 (50%), Gaps = 10/72 (13%)
Query: 53 LKIAMDIVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITD 112
L +A+D +H+L I++R+ K IL +EE KL DF LS + E
Sbjct: 135 LALALDHLHSLG---------IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAY- 184
Query: 113 TVMGTLGYCAPE 124
+ GT+ Y APE
Sbjct: 185 SFCGTVEYMAPE 196
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 36.2 bits (82), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 54/136 (39%), Gaps = 8/136 (5%)
Query: 1 QMSHNHILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIV 60
Q H HI+KLIG E P+ I + E G L + Q L L + A +
Sbjct: 67 QFDHPHIVKLIGVITENPVWI-IMELCTLGELRSFL----QVRKFSLDLASLILYAYQLS 121
Query: 61 HALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMGTLGY 120
ALAYL + V R+ +L + + KL DF LS + + + +
Sbjct: 122 TALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLPIKW 178
Query: 121 CAPEYMRTGVFNEKSN 136
APE + F S+
Sbjct: 179 MAPESINFRRFTSASD 194
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 36.2 bits (82), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 36/72 (50%), Gaps = 10/72 (13%)
Query: 53 LKIAMDIVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITD 112
L +A+D +H+L I++R+ K IL +EE KL DF LS + E
Sbjct: 135 LALALDHLHSLG---------IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAY- 184
Query: 113 TVMGTLGYCAPE 124
+ GT+ Y APE
Sbjct: 185 SFCGTVEYMAPE 196
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 36.2 bits (82), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 42/82 (51%), Gaps = 4/82 (4%)
Query: 55 IAMDIVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTV 114
I +I+ L YLH + R+ K + +L +E KL DF ++ + + + +T
Sbjct: 129 ILREILKGLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIK-RNTF 184
Query: 115 MGTLGYCAPEYMRTGVFNEKSN 136
+GT + APE ++ ++ K++
Sbjct: 185 VGTPFWMAPEVIKQSAYDSKAD 206
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 35.8 bits (81), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 36/72 (50%), Gaps = 10/72 (13%)
Query: 53 LKIAMDIVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITD 112
L +A+D +H+L I++R+ K IL +EE KL DF LS + E
Sbjct: 136 LALALDHLHSLG---------IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAY- 185
Query: 113 TVMGTLGYCAPE 124
+ GT+ Y APE
Sbjct: 186 SFCGTVEYMAPE 197
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 35.8 bits (81), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 55/122 (45%), Gaps = 12/122 (9%)
Query: 4 HNHILKLIGCCLETPIPI-LVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIVHA 62
H HI+KL + TP +V E V G L+D I E + + ++ I+ A
Sbjct: 70 HPHIIKLY-QVISTPTDFFMVMEYVSGGELFDYI--CKHGRVEEMEAR---RLFQQILSA 123
Query: 63 LAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMGTLGYCA 122
+ Y H +V R+ K +L + AK+ DF LS + +GE T G+ Y A
Sbjct: 124 VDYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE--FLRTSCGSPNYAA 178
Query: 123 PE 124
PE
Sbjct: 179 PE 180
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 35.8 bits (81), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 35/72 (48%), Gaps = 5/72 (6%)
Query: 55 IAMDIVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTV 114
I +V A+ YL + I+ R+ K I+ E+ KL DF + + G+ T
Sbjct: 135 IFRQLVSAVGYLRL---KDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFYT--F 189
Query: 115 MGTLGYCAPEYM 126
GT+ YCAPE +
Sbjct: 190 CGTIEYCAPEVL 201
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 35.8 bits (81), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 45/97 (46%), Gaps = 14/97 (14%)
Query: 74 IVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMGTLGYCAPEYMRTGVFNE 133
++ R+ K + + + + KL DF L+ I +T T +GT Y +PE M +NE
Sbjct: 137 VLHRDLKPANVFLDGKQNVKLGDFGLA-RILNHDTSFAKTFVGTPYYMSPEQMNRMSYNE 195
Query: 134 KSNXXXXXXXXXXXXTGWDVSDLVKDVHDLVCPFSEY 170
KS+ W + L+ ++ L+ PF+ +
Sbjct: 196 KSDI-------------WSLGCLLYELCALMPPFTAF 219
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 35.8 bits (81), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 60/154 (38%), Gaps = 24/154 (15%)
Query: 3 SHNHILKLIGCC-LETPIPILVFESVQYGTLW------------DRILGAPQPHFEP--- 46
SH +I+ L+G C L PI L+FE YG L D I Q E
Sbjct: 107 SHENIVNLLGACTLSGPI-YLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEED 165
Query: 47 ---LLLKHRLKIAMDIVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISI 103
L + L A + + +L F + V R+ +L V K+ DF L+ I
Sbjct: 166 LNVLTFEDLLCFAYQVAKGMEFLEF---KSCVHRDLAARNVLVTHGKVVKICDFGLARDI 222
Query: 104 PEGETHIT-DTVMGTLGYCAPEYMRTGVFNEKSN 136
++ + + APE + G++ KS+
Sbjct: 223 MSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSD 256
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 35.8 bits (81), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 35/72 (48%), Gaps = 10/72 (13%)
Query: 53 LKIAMDIVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITD 112
L + +D +H+L I++R+ K IL +EE KL DF LS + E
Sbjct: 139 LALGLDHLHSLG---------IIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAY- 188
Query: 113 TVMGTLGYCAPE 124
+ GT+ Y APE
Sbjct: 189 SFCGTVEYMAPE 200
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 35.8 bits (81), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 4/78 (5%)
Query: 55 IAMDIVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTV 114
I + L YLHF + R+ K IL N E AKL DF ++ + + + V
Sbjct: 130 ILQSTLKGLEYLHFMRK---IHRDIKAGNILLNTEGHAKLADFGVAGQLTDXMAK-RNXV 185
Query: 115 MGTLGYCAPEYMRTGVFN 132
+GT + APE ++ +N
Sbjct: 186 IGTPFWMAPEVIQEIGYN 203
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 35.4 bits (80), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 58/139 (41%), Gaps = 33/139 (23%)
Query: 4 HNHILKLIGCCLETPIPILVF-ESVQYGTLWDRILGAPQPHFEP------------LLLK 50
H +++ L+G C + P++V E ++G L L + + F P L L+
Sbjct: 127 HLNVVNLLGACTKPGGPLMVIVEFCKFGNL-STYLRSKRNEFVPYKVAPEDLYKDFLTLE 185
Query: 51 HRLKIAMDIVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHI 110
H + + + + +L R + R+ IL +E+NV K+ DF L+ I
Sbjct: 186 HLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDI------- 235
Query: 111 TDTVMGTLGYCAPEYMRTG 129
Y P+Y+R G
Sbjct: 236 ---------YKDPDYVRKG 245
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 35.4 bits (80), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 58/139 (41%), Gaps = 33/139 (23%)
Query: 4 HNHILKLIGCCLETPIPILVF-ESVQYGTLWDRILGAPQPHFEP------------LLLK 50
H +++ L+G C + P++V E ++G L L + + F P L L+
Sbjct: 81 HLNVVNLLGACTKPGGPLMVITEFCKFGNL-STYLRSKRNEFVPYKVAPEDLYKDFLTLE 139
Query: 51 HRLKIAMDIVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHI 110
H + + + + +L R + R+ IL +E+NV K+ DF L+ I
Sbjct: 140 HLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDI------- 189
Query: 111 TDTVMGTLGYCAPEYMRTG 129
Y P+Y+R G
Sbjct: 190 ---------YKDPDYVRKG 199
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 35.4 bits (80), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 58/139 (41%), Gaps = 33/139 (23%)
Query: 4 HNHILKLIGCCLETPIPILVF-ESVQYGTLWDRILGAPQPHFEP------------LLLK 50
H +++ L+G C + P++V E ++G L L + + F P L L+
Sbjct: 92 HLNVVNLLGACTKPGGPLMVIVEFCKFGNL-STYLRSKRNEFVPYKEAPEDLYKDFLTLE 150
Query: 51 HRLKIAMDIVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHI 110
H + + + + +L R + R+ IL +E+NV K+ DF L+ I
Sbjct: 151 HLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDI------- 200
Query: 111 TDTVMGTLGYCAPEYMRTG 129
Y P+Y+R G
Sbjct: 201 ---------YKDPDYVRKG 210
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 35.4 bits (80), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 58/139 (41%), Gaps = 33/139 (23%)
Query: 4 HNHILKLIGCCLETPIPILVF-ESVQYGTLWDRILGAPQPHFEP------------LLLK 50
H +++ L+G C + P++V E ++G L L + + F P L L+
Sbjct: 81 HLNVVNLLGACTKPGGPLMVITEFCKFGNL-STYLRSKRNEFVPYKVAPEDLYKDFLTLE 139
Query: 51 HRLKIAMDIVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHI 110
H + + + + +L R + R+ IL +E+NV K+ DF L+ I
Sbjct: 140 HLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDI------- 189
Query: 111 TDTVMGTLGYCAPEYMRTG 129
Y P+Y+R G
Sbjct: 190 ---------YKDPDYVRKG 199
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 35.4 bits (80), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 48/245 (19%), Positives = 96/245 (39%), Gaps = 37/245 (15%)
Query: 4 HNHILKLIGCCLETPIPILVF-ESVQYGTLWDRILGAPQPHFEP-----------LLLKH 51
H +++ L+G C + P++V E ++G L L + + F P L L+H
Sbjct: 91 HLNVVNLLGACTKPGGPLMVIVEFCKFGNL-STYLRSKRNEFVPYKTPEDLYKDFLTLEH 149
Query: 52 RLKIAMDIVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHI- 110
+ + + + +L R + R+ IL +E+NV K+ DF L+ I + +
Sbjct: 150 LICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVR 206
Query: 111 TDTVMGTLGYCAPEYMRTGVFNEKSNXXXXXXXXXXXXTGWDVSDLVKDVHDLVCPFSEY 170
L + APE + V+ +S+ W++ L + V E+
Sbjct: 207 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLL------WEIFSLGASPYPGVKIDEEF 260
Query: 171 LKNCFEDNRFTEIVDHIVVEDVSSIEKEQQLHASAQVTFECIKDSPADRPSMVDVAKKLR 230
+ E R + D ++ E Q + +C P+ RP+ ++ + L
Sbjct: 261 CRRLKEGTR-------MRAPDYTTPEMYQTM-------LDCWHGEPSQRPTFSELVEHLG 306
Query: 231 QIYRS 235
+ ++
Sbjct: 307 NLLQA 311
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 35.4 bits (80), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 48/246 (19%), Positives = 97/246 (39%), Gaps = 38/246 (15%)
Query: 4 HNHILKLIGCCLETPIPILVF-ESVQYGTLWDRILGAPQPHFEP------------LLLK 50
H +++ L+G C + P++V E ++G L L + + F P L L+
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNL-STYLRSKRNEFVPYKVAPEDLYKDFLTLE 148
Query: 51 HRLKIAMDIVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHI 110
H + + + + +L R + R+ IL +E+NV K+ DF L+ I + ++
Sbjct: 149 HLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYV 205
Query: 111 -TDTVMGTLGYCAPEYMRTGVFNEKSNXXXXXXXXXXXXTGWDVSDLVKDVHDLVCPFSE 169
L + APE + V+ +S+ W++ L + V E
Sbjct: 206 RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLL------WEIFSLGASPYPGVKIDEE 259
Query: 170 YLKNCFEDNRFTEIVDHIVVEDVSSIEKEQQLHASAQVTFECIKDSPADRPSMVDVAKKL 229
+ + E R + D ++ E Q + +C P+ RP+ ++ + L
Sbjct: 260 FCRRLKEGTR-------MRAPDYTTPEMYQTM-------LDCWHGEPSQRPTFSELVEHL 305
Query: 230 RQIYRS 235
+ ++
Sbjct: 306 GNLLQA 311
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 35.4 bits (80), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 30/133 (22%), Positives = 53/133 (39%), Gaps = 11/133 (8%)
Query: 2 MSHNHILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIVH 61
+ H +IL+L G + L+ E GT++ + + ++ +
Sbjct: 66 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTATYITELAN 120
Query: 62 ALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMGTLGYC 121
AL+Y H + ++ R+ K +L K+ DF S P T+ GTL Y
Sbjct: 121 ALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSCHAPSSRR---TTLSGTLDYL 174
Query: 122 APEYMRTGVFNEK 134
PE + + +EK
Sbjct: 175 PPEMIEGRMHDEK 187
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 35.4 bits (80), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 54/114 (47%), Gaps = 25/114 (21%)
Query: 22 LVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAM------DIVHALAYLHFGFPRPIV 75
+V E ++ G L+D+++G RLK A ++ A+ YLH I+
Sbjct: 91 IVLELMEGGELFDKVVG-----------NKRLKEATCKLYFYQMLLAVQYLH---ENGII 136
Query: 76 FRNFKTSCILFN---EENVAKLFDFSLSISIPEGETHITDTVMGTLGYCAPEYM 126
R+ K +L + E+ + K+ DF S + GET + T+ GT Y APE +
Sbjct: 137 HRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRTLCGTPTYLAPEVL 188
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 35.4 bits (80), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 54/114 (47%), Gaps = 25/114 (21%)
Query: 22 LVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAM------DIVHALAYLHFGFPRPIV 75
+V E ++ G L+D+++G RLK A ++ A+ YLH I+
Sbjct: 91 IVLELMEGGELFDKVVG-----------NKRLKEATCKLYFYQMLLAVQYLH---ENGII 136
Query: 76 FRNFKTSCILFN---EENVAKLFDFSLSISIPEGETHITDTVMGTLGYCAPEYM 126
R+ K +L + E+ + K+ DF S + GET + T+ GT Y APE +
Sbjct: 137 HRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRTLCGTPTYLAPEVL 188
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 35.4 bits (80), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 54/114 (47%), Gaps = 25/114 (21%)
Query: 22 LVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAM------DIVHALAYLHFGFPRPIV 75
+V E ++ G L+D+++G RLK A ++ A+ YLH I+
Sbjct: 90 IVLELMEGGELFDKVVG-----------NKRLKEATCKLYFYQMLLAVQYLH---ENGII 135
Query: 76 FRNFKTSCILFN---EENVAKLFDFSLSISIPEGETHITDTVMGTLGYCAPEYM 126
R+ K +L + E+ + K+ DF S + GET + T+ GT Y APE +
Sbjct: 136 HRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRTLCGTPTYLAPEVL 187
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 35.4 bits (80), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 54/114 (47%), Gaps = 25/114 (21%)
Query: 22 LVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAM------DIVHALAYLHFGFPRPIV 75
+V E ++ G L+D+++G RLK A ++ A+ YLH I+
Sbjct: 97 IVLELMEGGELFDKVVG-----------NKRLKEATCKLYFYQMLLAVQYLH---ENGII 142
Query: 76 FRNFKTSCILFN---EENVAKLFDFSLSISIPEGETHITDTVMGTLGYCAPEYM 126
R+ K +L + E+ + K+ DF S + GET + T+ GT Y APE +
Sbjct: 143 HRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRTLCGTPTYLAPEVL 194
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 35.4 bits (80), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 54/114 (47%), Gaps = 25/114 (21%)
Query: 22 LVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAM------DIVHALAYLHFGFPRPIV 75
+V E ++ G L+D+++G RLK A ++ A+ YLH I+
Sbjct: 91 IVLELMEGGELFDKVVG-----------NKRLKEATCKLYFYQMLLAVQYLH---ENGII 136
Query: 76 FRNFKTSCILFN---EENVAKLFDFSLSISIPEGETHITDTVMGTLGYCAPEYM 126
R+ K +L + E+ + K+ DF S + GET + T+ GT Y APE +
Sbjct: 137 HRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRTLCGTPTYLAPEVL 188
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 35.4 bits (80), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 38/85 (44%), Gaps = 6/85 (7%)
Query: 45 EPLLLKHRLKIAMDIVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISI- 103
+PL L+H ++ L Y+H ++ R+ K S +L NE K+ DF ++ +
Sbjct: 154 QPLTLEHVRYFLYQLLRGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGMARGLC 210
Query: 104 --PEGETHITDTVMGTLGYCAPEYM 126
P + + T Y APE M
Sbjct: 211 TSPAEHQYFMTEYVATRWYRAPELM 235
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 35.4 bits (80), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 61/135 (45%), Gaps = 12/135 (8%)
Query: 2 MSHNHILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIVH 61
+ H +I++L E LVF+ V G L++ I+ + ++ H + I+
Sbjct: 87 LKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVA--REYYSEADASHCIH---QILE 141
Query: 62 ALAYLHFGFPRPIVFRNFKTSCILFNEE---NVAKLFDFSLSISIPEGETHITDTVMGTL 118
++ ++H IV R+ K +L + KL DF L+I + +GE GT
Sbjct: 142 SVNHIH---QHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEV-QGEQQAWFGFAGTP 197
Query: 119 GYCAPEYMRTGVFNE 133
GY +PE +R + +
Sbjct: 198 GYLSPEVLRKDPYGK 212
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 35.0 bits (79), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 38/85 (44%), Gaps = 6/85 (7%)
Query: 45 EPLLLKHRLKIAMDIVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISI- 103
+PL L+H ++ L Y+H ++ R+ K S +L NE K+ DF ++ +
Sbjct: 153 QPLTLEHVRYFLYQLLRGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGMARGLC 209
Query: 104 --PEGETHITDTVMGTLGYCAPEYM 126
P + + T Y APE M
Sbjct: 210 TSPAEHQYFMTEYVATRWYRAPELM 234
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 35.0 bits (79), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 30/133 (22%), Positives = 57/133 (42%), Gaps = 11/133 (8%)
Query: 2 MSHNHILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIVH 61
+ H +IL+L G + L+ E GT++ + + F+ + ++ +
Sbjct: 67 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDE---QRTATYITELAN 121
Query: 62 ALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMGTLGYC 121
AL+Y H + ++ R+ K +L K+ +F S+ P T+ GTL Y
Sbjct: 122 ALSYCH---SKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRR---TTLCGTLDYL 175
Query: 122 APEYMRTGVFNEK 134
PE + + +EK
Sbjct: 176 PPEMIEGRMHDEK 188
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 35.0 bits (79), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 48/246 (19%), Positives = 96/246 (39%), Gaps = 38/246 (15%)
Query: 4 HNHILKLIGCCLETPIPILVF-ESVQYGTLWDRILGAPQPHFEP------------LLLK 50
H +++ L+G C + P++V E ++G L L + + F P L L+
Sbjct: 81 HLNVVNLLGACTKPGGPLMVIVEFCKFGNL-STYLRSKRNEFVPYKVAPEDLYKDFLTLE 139
Query: 51 HRLKIAMDIVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHI 110
H + + + + +L R + R+ IL +E+NV K+ DF L+ I + +
Sbjct: 140 HLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXV 196
Query: 111 TDT-VMGTLGYCAPEYMRTGVFNEKSNXXXXXXXXXXXXTGWDVSDLVKDVHDLVCPFSE 169
L + APE + V+ +S+ W++ L + V E
Sbjct: 197 RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLL------WEIFSLGASPYPGVKIDEE 250
Query: 170 YLKNCFEDNRFTEIVDHIVVEDVSSIEKEQQLHASAQVTFECIKDSPADRPSMVDVAKKL 229
+ + E R + D ++ E Q + +C P+ RP+ ++ + L
Sbjct: 251 FCRRLKEGTR-------MRAPDYTTPEMYQTM-------LDCWHGEPSQRPTFSELVEHL 296
Query: 230 RQIYRS 235
+ ++
Sbjct: 297 GNLLQA 302
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 35.0 bits (79), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 36/77 (46%), Gaps = 6/77 (7%)
Query: 58 DIVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMGT 117
++ +AL+Y H + ++ R+ K +L K+ DF S+ P T+ GT
Sbjct: 121 ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---TTLCGT 174
Query: 118 LGYCAPEYMRTGVFNEK 134
L Y PE + + +EK
Sbjct: 175 LDYLPPEMIEGRMHDEK 191
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 35.0 bits (79), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 36/72 (50%), Gaps = 6/72 (8%)
Query: 56 AMDIVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSL-SISIPEGETHITDTV 114
+IV AL YLH R +V+R+ K ++ +++ K+ DF L I +G T
Sbjct: 111 GAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT--MKXF 165
Query: 115 MGTLGYCAPEYM 126
GT Y APE +
Sbjct: 166 CGTPEYLAPEVL 177
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 35.0 bits (79), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 48/246 (19%), Positives = 96/246 (39%), Gaps = 38/246 (15%)
Query: 4 HNHILKLIGCCLETPIPILVF-ESVQYGTLWDRILGAPQPHFEP------------LLLK 50
H +++ L+G C + P++V E ++G L L + + F P L L+
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNL-STYLRSKRNEFVPYKVAPEDLYKDFLTLE 148
Query: 51 HRLKIAMDIVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHI 110
H + + + + +L R + R+ IL +E+NV K+ DF L+ I + +
Sbjct: 149 HLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXV 205
Query: 111 TDT-VMGTLGYCAPEYMRTGVFNEKSNXXXXXXXXXXXXTGWDVSDLVKDVHDLVCPFSE 169
L + APE + V+ +S+ W++ L + V E
Sbjct: 206 RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLL------WEIFSLGASPYPGVKIDEE 259
Query: 170 YLKNCFEDNRFTEIVDHIVVEDVSSIEKEQQLHASAQVTFECIKDSPADRPSMVDVAKKL 229
+ + E R + D ++ E Q + +C P+ RP+ ++ + L
Sbjct: 260 FCRRLKEGTR-------MRAPDYTTPEMYQTM-------LDCWHGEPSQRPTFSELVEHL 305
Query: 230 RQIYRS 235
+ ++
Sbjct: 306 GNLLQA 311
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 35.0 bits (79), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 48/246 (19%), Positives = 96/246 (39%), Gaps = 38/246 (15%)
Query: 4 HNHILKLIGCCLETPIPILVF-ESVQYGTLWDRILGAPQPHFEP------------LLLK 50
H +++ L+G C + P++V E ++G L L + + F P L L+
Sbjct: 81 HLNVVNLLGACTKPGGPLMVITEFCKFGNL-STYLRSKRNEFVPYKVAPEDLYKDFLTLE 139
Query: 51 HRLKIAMDIVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHI 110
H + + + + +L R + R+ IL +E+NV K+ DF L+ I + +
Sbjct: 140 HLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXV 196
Query: 111 TDT-VMGTLGYCAPEYMRTGVFNEKSNXXXXXXXXXXXXTGWDVSDLVKDVHDLVCPFSE 169
L + APE + V+ +S+ W++ L + V E
Sbjct: 197 RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLL------WEIFSLGASPYPGVKIDEE 250
Query: 170 YLKNCFEDNRFTEIVDHIVVEDVSSIEKEQQLHASAQVTFECIKDSPADRPSMVDVAKKL 229
+ + E R + D ++ E Q + +C P+ RP+ ++ + L
Sbjct: 251 FCRRLKEGTR-------MRAPDYTTPEMYQTM-------LDCWHGEPSQRPTFSELVEHL 296
Query: 230 RQIYRS 235
+ ++
Sbjct: 297 GNLLQA 302
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 35.0 bits (79), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 37/72 (51%), Gaps = 5/72 (6%)
Query: 56 AMDIVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSL-SISIPEGETHITDTV 114
+IV AL YLH + +V+R+ K ++ +++ K+ DF L I +G T T
Sbjct: 257 GAEIVSALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT--MKTF 312
Query: 115 MGTLGYCAPEYM 126
GT Y APE +
Sbjct: 313 CGTPEYLAPEVL 324
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 35.0 bits (79), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 36/72 (50%), Gaps = 6/72 (8%)
Query: 56 AMDIVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSL-SISIPEGETHITDTV 114
+IV AL YLH R +V+R+ K ++ +++ K+ DF L I +G T
Sbjct: 116 GAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT--MKXF 170
Query: 115 MGTLGYCAPEYM 126
GT Y APE +
Sbjct: 171 CGTPEYLAPEVL 182
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 35.0 bits (79), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 36/72 (50%), Gaps = 6/72 (8%)
Query: 56 AMDIVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSL-SISIPEGETHITDTV 114
+IV AL YLH R +V+R+ K ++ +++ K+ DF L I +G T
Sbjct: 111 GAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT--MKXF 165
Query: 115 MGTLGYCAPEYM 126
GT Y APE +
Sbjct: 166 CGTPEYLAPEVL 177
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 34.7 bits (78), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 30/140 (21%), Positives = 59/140 (42%), Gaps = 9/140 (6%)
Query: 3 SHNHILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFE-----PLLLKHRLKIAM 57
H +I+ L+G C +++ E YG L + + + + PL L+ L +
Sbjct: 108 QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSS 167
Query: 58 DIVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHIT-DTVMG 116
+ +A+L + + R+ +L +VAK+ DF L+ I +I
Sbjct: 168 QVAQGMAFLA---SKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARL 224
Query: 117 TLGYCAPEYMRTGVFNEKSN 136
+ + APE + V+ +S+
Sbjct: 225 PVKWMAPESIFDCVYTVQSD 244
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 34.7 bits (78), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 30/65 (46%), Gaps = 3/65 (4%)
Query: 60 VHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMGTLG 119
+ AL YLH I+ R+ K ILF + KL DF +S D+ +GT
Sbjct: 118 LDALNYLH---DNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGTPY 174
Query: 120 YCAPE 124
+ APE
Sbjct: 175 WMAPE 179
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 34.7 bits (78), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 36/72 (50%), Gaps = 6/72 (8%)
Query: 56 AMDIVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSL-SISIPEGETHITDTV 114
+IV AL YLH R +V+R+ K ++ +++ K+ DF L I +G T
Sbjct: 111 GAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT--MKXF 165
Query: 115 MGTLGYCAPEYM 126
GT Y APE +
Sbjct: 166 CGTPEYLAPEVL 177
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 34.7 bits (78), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 61/135 (45%), Gaps = 12/135 (8%)
Query: 2 MSHNHILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIVH 61
+ H +I++L E L+F+ V G L++ I+ + ++ H ++ I+
Sbjct: 78 LKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVA--REYYSEADASHCIQ---QILE 132
Query: 62 ALAYLHFGFPRPIVFRNFKTSCILFNEE---NVAKLFDFSLSISIPEGETHITDTVMGTL 118
A+ + H +V R+ K +L + KL DF L+I + EGE GT
Sbjct: 133 AVLHCH---QMGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEV-EGEQQAWFGFAGTP 188
Query: 119 GYCAPEYMRTGVFNE 133
GY +PE +R + +
Sbjct: 189 GYLSPEVLRKDPYGK 203
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 34.7 bits (78), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 37/72 (51%), Gaps = 5/72 (6%)
Query: 56 AMDIVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSL-SISIPEGETHITDTV 114
+IV AL YLH + +V+R+ K ++ +++ K+ DF L I +G T T
Sbjct: 254 GAEIVSALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT--MKTF 309
Query: 115 MGTLGYCAPEYM 126
GT Y APE +
Sbjct: 310 CGTPEYLAPEVL 321
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 34.7 bits (78), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 30/133 (22%), Positives = 57/133 (42%), Gaps = 11/133 (8%)
Query: 2 MSHNHILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIVH 61
+ H +IL+L G + L+ E GT++ + + F+ + ++ +
Sbjct: 68 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDE---QRTATYITELAN 122
Query: 62 ALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMGTLGYC 121
AL+Y H + ++ R+ K +L K+ +F S+ P T+ GTL Y
Sbjct: 123 ALSYCH---SKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRR---TTLCGTLDYL 176
Query: 122 APEYMRTGVFNEK 134
PE + + +EK
Sbjct: 177 PPEMIEGRMHDEK 189
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 34.7 bits (78), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 36/74 (48%), Gaps = 9/74 (12%)
Query: 55 IAMDIVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTV 114
+A+D +H++ +H R+ K +L ++ KL DF + + E DT
Sbjct: 185 LALDAIHSMGLIH---------RDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTA 235
Query: 115 MGTLGYCAPEYMRT 128
+GT Y +PE +++
Sbjct: 236 VGTPDYISPEVLKS 249
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 34.7 bits (78), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 38/83 (45%), Gaps = 9/83 (10%)
Query: 54 KIAMDIVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDT 113
KIA+ IV AL +LH ++ R+ K S +L N K+ DF +S ++ D+
Sbjct: 157 KIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGIS-------GYLVDS 207
Query: 114 VMGTLGYCAPEYMRTGVFNEKSN 136
V T+ YM N + N
Sbjct: 208 VAKTIDAGCKPYMAPERINPELN 230
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 34.7 bits (78), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 30/139 (21%), Positives = 59/139 (42%), Gaps = 9/139 (6%)
Query: 4 HNHILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFE-----PLLLKHRLKIAMD 58
H +I+ L+G C +++ E YG L + + + + PL L+ L +
Sbjct: 101 HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQ 160
Query: 59 IVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHIT-DTVMGT 117
+ +A+L + + R+ +L +VAK+ DF L+ I +I
Sbjct: 161 VAQGMAFLA---SKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLP 217
Query: 118 LGYCAPEYMRTGVFNEKSN 136
+ + APE + V+ +S+
Sbjct: 218 VKWMAPESIFDCVYTVQSD 236
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 34.7 bits (78), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 4/77 (5%)
Query: 56 AMDIVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVM 115
A +I+ L +LH + IV+R+ K IL +++ K+ DF + G+ T+
Sbjct: 124 AAEIILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAK-TNXFC 179
Query: 116 GTLGYCAPEYMRTGVFN 132
GT Y APE + +N
Sbjct: 180 GTPDYIAPEILLGQKYN 196
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 34.7 bits (78), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 4/77 (5%)
Query: 56 AMDIVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVM 115
A +I+ L +LH + IV+R+ K IL +++ K+ DF + G+ T+
Sbjct: 125 AAEIILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAK-TNEFC 180
Query: 116 GTLGYCAPEYMRTGVFN 132
GT Y APE + +N
Sbjct: 181 GTPDYIAPEILLGQKYN 197
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 34.7 bits (78), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 46/94 (48%), Gaps = 6/94 (6%)
Query: 45 EPLLLKHRLKIAMDIVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIP 104
EP+ ++ + + + + +L R + R+ IL +E NV K+ DF L+ I
Sbjct: 194 EPITMEDLISYSFQVARGMEFLS---SRKCIHRDLAARNILLSENNVVKICDFGLARDIY 250
Query: 105 EGETHI--TDTVMGTLGYCAPEYMRTGVFNEKSN 136
+ ++ DT + L + APE + +++ KS+
Sbjct: 251 KNPDYVRKGDTRL-PLKWMAPESIFDKIYSTKSD 283
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 34.7 bits (78), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 54/114 (47%), Gaps = 25/114 (21%)
Query: 22 LVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAM------DIVHALAYLHFGFPRPIV 75
+V E ++ G L+D+++G RLK A ++ A+ YLH I+
Sbjct: 216 IVLELMEGGELFDKVVG-----------NKRLKEATCKLYFYQMLLAVQYLH---ENGII 261
Query: 76 FRNFKTSCILFN---EENVAKLFDFSLSISIPEGETHITDTVMGTLGYCAPEYM 126
R+ K +L + E+ + K+ DF S + GET + T+ GT Y APE +
Sbjct: 262 HRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRTLCGTPTYLAPEVL 313
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 34.7 bits (78), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 18/74 (24%), Positives = 37/74 (50%), Gaps = 9/74 (12%)
Query: 55 IAMDIVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTV 114
+A+D +H++ ++H R+ K +L ++ KL DF + + + DT
Sbjct: 179 LALDAIHSMGFIH---------RDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTA 229
Query: 115 MGTLGYCAPEYMRT 128
+GT Y +PE +++
Sbjct: 230 VGTPDYISPEVLKS 243
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 34.7 bits (78), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 18/74 (24%), Positives = 37/74 (50%), Gaps = 9/74 (12%)
Query: 55 IAMDIVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTV 114
+A+D +H++ ++H R+ K +L ++ KL DF + + + DT
Sbjct: 184 LALDAIHSMGFIH---------RDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTA 234
Query: 115 MGTLGYCAPEYMRT 128
+GT Y +PE +++
Sbjct: 235 VGTPDYISPEVLKS 248
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 34.7 bits (78), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 54/114 (47%), Gaps = 25/114 (21%)
Query: 22 LVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAM------DIVHALAYLHFGFPRPIV 75
+V E ++ G L+D+++G RLK A ++ A+ YLH I+
Sbjct: 230 IVLELMEGGELFDKVVG-----------NKRLKEATCKLYFYQMLLAVQYLH---ENGII 275
Query: 76 FRNFKTSCILFN---EENVAKLFDFSLSISIPEGETHITDTVMGTLGYCAPEYM 126
R+ K +L + E+ + K+ DF S + GET + T+ GT Y APE +
Sbjct: 276 HRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRTLCGTPTYLAPEVL 327
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 34.3 bits (77), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 32/146 (21%), Positives = 58/146 (39%), Gaps = 17/146 (11%)
Query: 4 HNHILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFE-----------PLLLKHR 52
H +I+ L+G C + ++ E G L + + P E L K
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDL 152
Query: 53 LKIAMDIVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITD 112
+ A + + YL + + R+ +L E+NV K+ DF L+ I + +
Sbjct: 153 VSCAYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHID-YYKK 208
Query: 113 TVMGTL--GYCAPEYMRTGVFNEKSN 136
T G L + APE + ++ +S+
Sbjct: 209 TTNGRLPVKWMAPEALFDRIYTHQSD 234
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 34.3 bits (77), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 57/122 (46%), Gaps = 12/122 (9%)
Query: 4 HNHILKLIGCCLETPIPI-LVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIVHA 62
H HI+KL + TP +V E V G L+D I E + + ++ I+ A
Sbjct: 70 HPHIIKLY-QVISTPTDFFMVMEYVSGGELFDYI--CKHGRVEEMEAR---RLFQQILSA 123
Query: 63 LAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMGTLGYCA 122
+ Y H +V R+ K +L + AK+ DF LS + +GE + D+ G+ Y A
Sbjct: 124 VDYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE-FLRDSC-GSPNYAA 178
Query: 123 PE 124
PE
Sbjct: 179 PE 180
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 34.3 bits (77), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 32/147 (21%), Positives = 58/147 (39%), Gaps = 17/147 (11%)
Query: 3 SHNHILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFE-----------PLLLKH 51
H +I+ L+G C + ++ E G L + + P E L K
Sbjct: 81 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 140
Query: 52 RLKIAMDIVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHIT 111
+ A + + YL + + R+ +L E+NV K+ DF L+ I + +
Sbjct: 141 LVSCAYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHID-YYK 196
Query: 112 DTVMGTL--GYCAPEYMRTGVFNEKSN 136
T G L + APE + ++ +S+
Sbjct: 197 KTTNGRLPVKWMAPEALFDRIYTHQSD 223
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 34.3 bits (77), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 33/149 (22%), Positives = 57/149 (38%), Gaps = 23/149 (15%)
Query: 4 HNHILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFE-----------PLLLKHR 52
H +I+ L+G C + ++ E G L + + P E L K
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDL 152
Query: 53 LKIAMDIVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITD 112
+ A + + YL + + R+ +L E+NV K+ DF L+ I HI
Sbjct: 153 VSCAYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDI----HHIDX 205
Query: 113 TVMGTLG-----YCAPEYMRTGVFNEKSN 136
T G + APE + ++ +S+
Sbjct: 206 XKKTTNGRLPVKWMAPEALFDRIYTHQSD 234
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 34.3 bits (77), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 32/147 (21%), Positives = 58/147 (39%), Gaps = 17/147 (11%)
Query: 3 SHNHILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFE-----------PLLLKH 51
H +I+ L+G C + ++ E G L + + P E L K
Sbjct: 77 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKD 136
Query: 52 RLKIAMDIVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHIT 111
+ A + + YL + + R+ +L E+NV K+ DF L+ I + +
Sbjct: 137 LVSCAYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHID-YYK 192
Query: 112 DTVMGTL--GYCAPEYMRTGVFNEKSN 136
T G L + APE + ++ +S+
Sbjct: 193 KTTNGRLPVKWMAPEALFDRIYTHQSD 219
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 34.3 bits (77), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 18/74 (24%), Positives = 37/74 (50%), Gaps = 9/74 (12%)
Query: 55 IAMDIVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTV 114
+A+D +H++ ++H R+ K +L ++ KL DF + + + DT
Sbjct: 184 LALDAIHSMGFIH---------RDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTA 234
Query: 115 MGTLGYCAPEYMRT 128
+GT Y +PE +++
Sbjct: 235 VGTPDYISPEVLKS 248
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 34.3 bits (77), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 32/147 (21%), Positives = 58/147 (39%), Gaps = 17/147 (11%)
Query: 3 SHNHILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFE-----------PLLLKH 51
H +I+ L+G C + ++ E G L + + P E L K
Sbjct: 85 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 144
Query: 52 RLKIAMDIVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHIT 111
+ A + + YL + + R+ +L E+NV K+ DF L+ I + +
Sbjct: 145 LVSCAYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHID-YYK 200
Query: 112 DTVMGTL--GYCAPEYMRTGVFNEKSN 136
T G L + APE + ++ +S+
Sbjct: 201 KTTNGRLPVKWMAPEALFDRIYTHQSD 227
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 34.3 bits (77), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 51/113 (45%), Gaps = 17/113 (15%)
Query: 4 HNHILKLIGCCLETPIPILVF-ESVQYGTLWDRILGAPQPHFEP------------LLLK 50
H +++ L+G C + P++V E ++G L L + + F P L L+
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNL-STYLRSKRNEFVPYKVAPEDLYKDFLTLE 148
Query: 51 HRLKIAMDIVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISI 103
H + + + + +L R + R+ IL +E+NV K+ DF L+ I
Sbjct: 149 HLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDI 198
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 34.3 bits (77), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 32/146 (21%), Positives = 58/146 (39%), Gaps = 17/146 (11%)
Query: 4 HNHILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFE-----------PLLLKHR 52
H +I+ L+G C + ++ E G L + + P E L K
Sbjct: 85 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 144
Query: 53 LKIAMDIVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITD 112
+ A + + YL + + R+ +L E+NV K+ DF L+ I + +
Sbjct: 145 VSCAYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHID-YYKK 200
Query: 113 TVMGTL--GYCAPEYMRTGVFNEKSN 136
T G L + APE + ++ +S+
Sbjct: 201 TTNGRLPVKWMAPEALFDRIYTHQSD 226
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 34.3 bits (77), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 32/146 (21%), Positives = 58/146 (39%), Gaps = 17/146 (11%)
Query: 4 HNHILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFE-----------PLLLKHR 52
H +I+ L+G C + ++ E G L + + P E L K
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 152
Query: 53 LKIAMDIVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITD 112
+ A + + YL + + R+ +L E+NV K+ DF L+ I + +
Sbjct: 153 VSCAYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHID-YYKK 208
Query: 113 TVMGTL--GYCAPEYMRTGVFNEKSN 136
T G L + APE + ++ +S+
Sbjct: 209 TTNGRLPVKWMAPEALFDRIYTHQSD 234
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 34.3 bits (77), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 32/147 (21%), Positives = 58/147 (39%), Gaps = 17/147 (11%)
Query: 3 SHNHILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFE-----------PLLLKH 51
H +I+ L+G C + ++ E G L + + P E L K
Sbjct: 92 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKD 151
Query: 52 RLKIAMDIVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHIT 111
+ A + + YL + + R+ +L E+NV K+ DF L+ I + +
Sbjct: 152 LVSCAYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHID-YYK 207
Query: 112 DTVMGTL--GYCAPEYMRTGVFNEKSN 136
T G L + APE + ++ +S+
Sbjct: 208 KTTNGRLPVKWMAPEALFDRIYTHQSD 234
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 34.3 bits (77), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 46/99 (46%), Gaps = 8/99 (8%)
Query: 2 MSHNHILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIVH 61
M H H+++L+G CL +P LV + + +G L + + H + + + L + I
Sbjct: 74 MDHPHLVRLLGVCL-SPTIQLVTQLMPHGCLLEYV----HEHKDNIGSQLLLNWCVQIAK 128
Query: 62 ALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLS 100
+ YL R +V R+ +L N K+ DF L+
Sbjct: 129 GMMYLE---ERRLVHRDLAARNVLVKSPNHVKITDFGLA 164
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 34.3 bits (77), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 44/97 (45%), Gaps = 14/97 (14%)
Query: 74 IVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMGTLGYCAPEYMRTGVFNE 133
++ R+ K + + + + KL DF L+ I +T +GT Y +PE M +NE
Sbjct: 137 VLHRDLKPANVFLDGKQNVKLGDFGLA-RILNHDTSFAKAFVGTPYYMSPEQMNRMSYNE 195
Query: 134 KSNXXXXXXXXXXXXTGWDVSDLVKDVHDLVCPFSEY 170
KS+ W + L+ ++ L+ PF+ +
Sbjct: 196 KSDI-------------WSLGCLLYELCALMPPFTAF 219
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 33.9 bits (76), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 46/99 (46%), Gaps = 8/99 (8%)
Query: 2 MSHNHILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIVH 61
M H H+++L+G CL +P LV + + +G L + + H + + + L + I
Sbjct: 97 MDHPHLVRLLGVCL-SPTIQLVTQLMPHGCLLEYV----HEHKDNIGSQLLLNWCVQIAK 151
Query: 62 ALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLS 100
+ YL R +V R+ +L N K+ DF L+
Sbjct: 152 GMMYLE---ERRLVHRDLAARNVLVKSPNHVKITDFGLA 187
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 33.5 bits (75), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 9/74 (12%)
Query: 55 IAMDIVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTV 114
IA+D VH L Y+H R+ K IL + +L DF + + E T +
Sbjct: 186 IAIDSVHQLHYVH---------RDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVA 236
Query: 115 MGTLGYCAPEYMRT 128
+GT Y +PE ++
Sbjct: 237 VGTPDYISPEILQA 250
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 33.5 bits (75), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 50/110 (45%), Gaps = 17/110 (15%)
Query: 22 LVFESVQYGTLWDRILGAPQPHFEPLLLKHR--LKIAMDIVHALAYLHFGFPRPIVFRNF 79
L+ + V G L+DRI+ E R ++ ++ A+ YLH IV R+
Sbjct: 93 LIMQLVSGGELFDRIV-------EKGFYTERDASRLIFQVLDAVKYLH---DLGIVHRDL 142
Query: 80 KTSCILF---NEENVAKLFDFSLSISIPEGETHITDTVMGTLGYCAPEYM 126
K +L+ +E++ + DF LS E + T GT GY APE +
Sbjct: 143 KPENLLYYSLDEDSKIMISDFGLSKM--EDPGSVLSTACGTPGYVAPEVL 190
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 33.5 bits (75), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 31/147 (21%), Positives = 56/147 (38%), Gaps = 17/147 (11%)
Query: 3 SHNHILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFE-----------PLLLKH 51
H +I+ L+G C + ++ E G L + + P E + K
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 52 RLKIAMDIVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHIT 111
+ + + YL + + R+ +L E NV K+ DF L+ I +
Sbjct: 159 LVSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDI-NNIDYYK 214
Query: 112 DTVMGTL--GYCAPEYMRTGVFNEKSN 136
+T G L + APE + V+ +S+
Sbjct: 215 NTTNGRLPVKWMAPEALFDRVYTHQSD 241
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 33.5 bits (75), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 33/71 (46%), Gaps = 4/71 (5%)
Query: 56 AMDIVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVM 115
A +I AL YLH IV+R+ K IL + + L DF L E + T T
Sbjct: 145 AAEIASALGYLH---SLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNS-TTSTFC 200
Query: 116 GTLGYCAPEYM 126
GT Y APE +
Sbjct: 201 GTPEYLAPEVL 211
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 33.5 bits (75), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 50/110 (45%), Gaps = 17/110 (15%)
Query: 22 LVFESVQYGTLWDRILGAPQPHFEPLLLKHR--LKIAMDIVHALAYLHFGFPRPIVFRNF 79
L+ + V G L+DRI+ E R ++ ++ A+ YLH IV R+
Sbjct: 93 LIMQLVSGGELFDRIV-------EKGFYTERDASRLIFQVLDAVKYLH---DLGIVHRDL 142
Query: 80 KTSCILF---NEENVAKLFDFSLSISIPEGETHITDTVMGTLGYCAPEYM 126
K +L+ +E++ + DF LS E + T GT GY APE +
Sbjct: 143 KPENLLYYSLDEDSKIMISDFGLSKM--EDPGSVLSTACGTPGYVAPEVL 190
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 33.5 bits (75), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 61/138 (44%), Gaps = 11/138 (7%)
Query: 3 SHNHILKLIGCCLETP-IPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIVH 61
SH ++L L+G CL + P++V +++G L + I P +K + + +
Sbjct: 88 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH---NP-TVKDLIGFGLQVAK 143
Query: 62 ALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMGT---L 118
+ YL + V R+ + +E+ K+ DF L+ + + E + G +
Sbjct: 144 GMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPV 200
Query: 119 GYCAPEYMRTGVFNEKSN 136
+ A E ++T F KS+
Sbjct: 201 KWMALESLQTQKFTTKSD 218
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 33.5 bits (75), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 50/110 (45%), Gaps = 17/110 (15%)
Query: 22 LVFESVQYGTLWDRILGAPQPHFEPLLLKHR--LKIAMDIVHALAYLHFGFPRPIVFRNF 79
L+ + V G L+DRI+ E R ++ ++ A+ YLH IV R+
Sbjct: 93 LIMQLVSGGELFDRIV-------EKGFYTERDASRLIFQVLDAVKYLH---DLGIVHRDL 142
Query: 80 KTSCILF---NEENVAKLFDFSLSISIPEGETHITDTVMGTLGYCAPEYM 126
K +L+ +E++ + DF LS E + T GT GY APE +
Sbjct: 143 KPENLLYYSLDEDSKIMISDFGLSKM--EDPGSVLSTACGTPGYVAPEVL 190
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 33.5 bits (75), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 61/138 (44%), Gaps = 11/138 (7%)
Query: 3 SHNHILKLIGCCLET-PIPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIVH 61
SH ++L L+G CL + P++V +++G L + I P +K + + +
Sbjct: 89 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH---NP-TVKDLIGFGLQVAK 144
Query: 62 ALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMGT---L 118
+ YL + V R+ + +E+ K+ DF L+ + + E + G +
Sbjct: 145 GMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPV 201
Query: 119 GYCAPEYMRTGVFNEKSN 136
+ A E ++T F KS+
Sbjct: 202 KWMALESLQTQKFTTKSD 219
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 33.5 bits (75), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 61/138 (44%), Gaps = 11/138 (7%)
Query: 3 SHNHILKLIGCCLETP-IPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIVH 61
SH ++L L+G CL + P++V +++G L + I P +K + + +
Sbjct: 89 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH---NP-TVKDLIGFGLQVAK 144
Query: 62 ALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMGT---L 118
+ YL + V R+ + +E+ K+ DF L+ + + E + G +
Sbjct: 145 GMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPV 201
Query: 119 GYCAPEYMRTGVFNEKSN 136
+ A E ++T F KS+
Sbjct: 202 KWMALESLQTQKFTTKSD 219
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 33.5 bits (75), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 61/138 (44%), Gaps = 11/138 (7%)
Query: 3 SHNHILKLIGCCLET-PIPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIVH 61
SH ++L L+G CL + P++V +++G L + I P +K + + +
Sbjct: 87 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH---NP-TVKDLIGFGLQVAK 142
Query: 62 ALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMGT---L 118
+ YL + V R+ + +E+ K+ DF L+ + + E + G +
Sbjct: 143 GMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPV 199
Query: 119 GYCAPEYMRTGVFNEKSN 136
+ A E ++T F KS+
Sbjct: 200 KWMALESLQTQKFTTKSD 217
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 33.5 bits (75), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 50/110 (45%), Gaps = 17/110 (15%)
Query: 22 LVFESVQYGTLWDRILGAPQPHFEPLLLKHR--LKIAMDIVHALAYLHFGFPRPIVFRNF 79
L+ + V G L+DRI+ E R ++ ++ A+ YLH IV R+
Sbjct: 93 LIMQLVSGGELFDRIV-------EKGFYTERDASRLIFQVLDAVKYLH---DLGIVHRDL 142
Query: 80 KTSCILF---NEENVAKLFDFSLSISIPEGETHITDTVMGTLGYCAPEYM 126
K +L+ +E++ + DF LS E + T GT GY APE +
Sbjct: 143 KPENLLYYSLDEDSKIMISDFGLSKM--EDPGSVLSTACGTPGYVAPEVL 190
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 33.5 bits (75), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/146 (21%), Positives = 58/146 (39%), Gaps = 17/146 (11%)
Query: 4 HNHILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFE-----------PLLLKHR 52
H +I+ L+G C + ++ E G L + + P E L K
Sbjct: 134 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 193
Query: 53 LKIAMDIVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITD 112
+ A + + YL + + R+ +L E+NV K+ DF L+ I + +
Sbjct: 194 VSCAYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHID-YYKK 249
Query: 113 TVMGTL--GYCAPEYMRTGVFNEKSN 136
T G L + APE + ++ +S+
Sbjct: 250 TTNGRLPVKWMAPEALFDRIYTHQSD 275
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 33.1 bits (74), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 61/138 (44%), Gaps = 11/138 (7%)
Query: 3 SHNHILKLIGCCLET-PIPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIVH 61
SH ++L L+G CL + P++V +++G L + I P +K + + +
Sbjct: 107 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH---NP-TVKDLIGFGLQVAK 162
Query: 62 ALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMGT---L 118
+ YL + V R+ + +E+ K+ DF L+ + + E + G +
Sbjct: 163 GMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPV 219
Query: 119 GYCAPEYMRTGVFNEKSN 136
+ A E ++T F KS+
Sbjct: 220 KWMALESLQTQKFTTKSD 237
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 33.1 bits (74), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 61/138 (44%), Gaps = 11/138 (7%)
Query: 3 SHNHILKLIGCCLETP-IPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIVH 61
SH ++L L+G CL + P++V +++G L + I P +K + + +
Sbjct: 86 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH---NP-TVKDLIGFGLQVAK 141
Query: 62 ALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMGT---L 118
+ YL + V R+ + +E+ K+ DF L+ + + E + G +
Sbjct: 142 GMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPV 198
Query: 119 GYCAPEYMRTGVFNEKSN 136
+ A E ++T F KS+
Sbjct: 199 KWMALESLQTQKFTTKSD 216
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 33.1 bits (74), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 61/138 (44%), Gaps = 11/138 (7%)
Query: 3 SHNHILKLIGCCLET-PIPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIVH 61
SH ++L L+G CL + P++V +++G L + I P +K + + +
Sbjct: 84 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH---NP-TVKDLIGFGLQVAK 139
Query: 62 ALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMGT---L 118
+ YL + V R+ + +E+ K+ DF L+ + + E + G +
Sbjct: 140 GMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPV 196
Query: 119 GYCAPEYMRTGVFNEKSN 136
+ A E ++T F KS+
Sbjct: 197 KWMALESLQTQKFTTKSD 214
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 33.1 bits (74), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 61/138 (44%), Gaps = 11/138 (7%)
Query: 3 SHNHILKLIGCCLET-PIPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIVH 61
SH ++L L+G CL + P++V +++G L + I P +K + + +
Sbjct: 81 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH---NP-TVKDLIGFGLQVAK 136
Query: 62 ALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMGT---L 118
+ YL + V R+ + +E+ K+ DF L+ + + E + G +
Sbjct: 137 GMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPV 193
Query: 119 GYCAPEYMRTGVFNEKSN 136
+ A E ++T F KS+
Sbjct: 194 KWMALESLQTQKFTTKSD 211
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 33.1 bits (74), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 55/136 (40%), Gaps = 8/136 (5%)
Query: 1 QMSHNHILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIV 60
+ H HI+KLIG E P I + E YG L L + + L L + ++ I
Sbjct: 65 NLDHPHIVKLIGIIEEEPTWI-IMELYPYGEL-GHYLERNKNSLKVLTL---VLYSLQIC 119
Query: 61 HALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMGTLGY 120
A+AYL V R+ IL KL DF LS I + + + + +
Sbjct: 120 KAMAYLE---SINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKW 176
Query: 121 CAPEYMRTGVFNEKSN 136
+PE + F S+
Sbjct: 177 MSPESINFRRFTTASD 192
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 33.1 bits (74), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 38/74 (51%), Gaps = 11/74 (14%)
Query: 57 MDIVHALAYLH-FGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVM 115
++I+ AL+YLH G +V+ + K I+ EE + KL D I + +
Sbjct: 189 LEILPALSYLHSIG----LVYNDLKPENIMLTEEQL-KLIDLGAVSRI-----NSFGYLY 238
Query: 116 GTLGYCAPEYMRTG 129
GT G+ APE +RTG
Sbjct: 239 GTPGFQAPEIVRTG 252
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 33.1 bits (74), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 61/138 (44%), Gaps = 11/138 (7%)
Query: 3 SHNHILKLIGCCLET-PIPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIVH 61
SH ++L L+G CL + P++V +++G L + I P +K + + +
Sbjct: 108 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH---NP-TVKDLIGFGLQVAK 163
Query: 62 ALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMGT---L 118
+ YL + V R+ + +E+ K+ DF L+ + + E + G +
Sbjct: 164 GMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPV 220
Query: 119 GYCAPEYMRTGVFNEKSN 136
+ A E ++T F KS+
Sbjct: 221 KWMALESLQTQKFTTKSD 238
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 33.1 bits (74), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 34/71 (47%), Gaps = 4/71 (5%)
Query: 54 KIAMDIVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDT 113
KIA+ IV AL +LH ++ R+ K S +L N K+ DF +S + + D
Sbjct: 113 KIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDA 170
Query: 114 VMGTLGYCAPE 124
G Y APE
Sbjct: 171 --GCKPYMAPE 179
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 33.1 bits (74), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 55/136 (40%), Gaps = 8/136 (5%)
Query: 1 QMSHNHILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIV 60
+ H HI+KLIG E P I + E YG L L + + L L + ++ I
Sbjct: 69 NLDHPHIVKLIGIIEEEPTWI-IMELYPYGEL-GHYLERNKNSLKVLTL---VLYSLQIC 123
Query: 61 HALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMGTLGY 120
A+AYL V R+ IL KL DF LS I + + + + +
Sbjct: 124 KAMAYLE---SINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKW 180
Query: 121 CAPEYMRTGVFNEKSN 136
+PE + F S+
Sbjct: 181 MSPESINFRRFTTASD 196
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 33.1 bits (74), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 67/141 (47%), Gaps = 17/141 (12%)
Query: 1 QMSHNHILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFEP---LLLKHRLKIAM 57
Q+ + +I+++IG C E +LV E + G L ++ L + H + + L H++ + M
Sbjct: 84 QLDNPYIVRMIGIC-EAESWMLVMEMAELGPL-NKYLQQNR-HVKDKNIIELVHQVSMGM 140
Query: 58 DIVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMGT 117
+ ++H R + RN +L ++ AK+ DF LS ++ E + G
Sbjct: 141 KYLEESNFVH----RDLAARN-----VLLVTQHYAKISDFGLSKALRADENYYKAQTHGK 191
Query: 118 --LGYCAPEYMRTGVFNEKSN 136
+ + APE + F+ KS+
Sbjct: 192 WPVKWYAPECINYYKFSSKSD 212
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 33.1 bits (74), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 67/141 (47%), Gaps = 17/141 (12%)
Query: 1 QMSHNHILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFEP---LLLKHRLKIAM 57
Q+ + +I+++IG C E +LV E + G L ++ L + H + + L H++ + M
Sbjct: 84 QLDNPYIVRMIGIC-EAESWMLVMEMAELGPL-NKYLQQNR-HVKDKNIIELVHQVSMGM 140
Query: 58 DIVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMGT 117
+ ++H R + RN +L ++ AK+ DF LS ++ E + G
Sbjct: 141 KYLEESNFVH----RDLAARN-----VLLVTQHYAKISDFGLSKALRADENYYKAQTHGK 191
Query: 118 --LGYCAPEYMRTGVFNEKSN 136
+ + APE + F+ KS+
Sbjct: 192 WPVKWYAPECINYYKFSSKSD 212
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 32.7 bits (73), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 58/126 (46%), Gaps = 9/126 (7%)
Query: 1 QMSHNHILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIV 60
++ H++I+KL +LVFE + ++L + E + K L + ++
Sbjct: 56 ELKHSNIVKLYDVIHTKKRLVLVFEHLDQDL--KKLLDVCEGGLESVTAKSFL---LQLL 110
Query: 61 HALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMGTLGY 120
+ +AY H R ++ R+ K +L N E K+ DF L+ + T V+ TL Y
Sbjct: 111 NGIAYCH---DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV-TLWY 166
Query: 121 CAPEYM 126
AP+ +
Sbjct: 167 RAPDVL 172
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 32.7 bits (73), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 58/126 (46%), Gaps = 9/126 (7%)
Query: 1 QMSHNHILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIV 60
++ H++I+KL +LVFE + ++L + E + K L + ++
Sbjct: 56 ELKHSNIVKLYDVIHTKKRLVLVFEHLDQDL--KKLLDVCEGGLESVTAKSFL---LQLL 110
Query: 61 HALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMGTLGY 120
+ +AY H R ++ R+ K +L N E K+ DF L+ + T V+ TL Y
Sbjct: 111 NGIAYCH---DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV-TLWY 166
Query: 121 CAPEYM 126
AP+ +
Sbjct: 167 RAPDVL 172
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 32.7 bits (73), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 67/141 (47%), Gaps = 17/141 (12%)
Query: 1 QMSHNHILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFEP---LLLKHRLKIAM 57
Q+ + +I+++IG C E +LV E + G L ++ L + H + + L H++ + M
Sbjct: 64 QLDNPYIVRMIGIC-EAESWMLVMEMAELGPL-NKYLQQNR-HVKDKNIIELVHQVSMGM 120
Query: 58 DIVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMGT 117
+ ++H R + RN +L ++ AK+ DF LS ++ E + G
Sbjct: 121 KYLEESNFVH----RDLAARN-----VLLVTQHYAKISDFGLSKALRADENYYKAQTHGK 171
Query: 118 --LGYCAPEYMRTGVFNEKSN 136
+ + APE + F+ KS+
Sbjct: 172 WPVKWYAPECINYYKFSSKSD 192
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 32.7 bits (73), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 31/147 (21%), Positives = 55/147 (37%), Gaps = 17/147 (11%)
Query: 3 SHNHILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFE-----------PLLLKH 51
H +I+ L+G C + ++ E G L + + P E + K
Sbjct: 86 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 145
Query: 52 RLKIAMDIVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHIT 111
+ + + YL + + R+ +L E NV K+ DF L+ I +
Sbjct: 146 LVSCTYQLARGMEYLA---SQKCIHRDLTARNVLVTENNVMKIADFGLARDI-NNIDYYK 201
Query: 112 DTVMGTL--GYCAPEYMRTGVFNEKSN 136
T G L + APE + V+ +S+
Sbjct: 202 KTTNGRLPVKWMAPEALFDRVYTHQSD 228
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 32.7 bits (73), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 31/147 (21%), Positives = 55/147 (37%), Gaps = 17/147 (11%)
Query: 3 SHNHILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFE-----------PLLLKH 51
H +I+ L+G C + ++ E G L + + P E + K
Sbjct: 91 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 150
Query: 52 RLKIAMDIVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHIT 111
+ + + YL + + R+ +L E NV K+ DF L+ I +
Sbjct: 151 LVSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDI-NNIDYYK 206
Query: 112 DTVMGTL--GYCAPEYMRTGVFNEKSN 136
T G L + APE + V+ +S+
Sbjct: 207 KTTNGRLPVKWMAPEALFDRVYTHQSD 233
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 32.7 bits (73), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 31/147 (21%), Positives = 55/147 (37%), Gaps = 17/147 (11%)
Query: 3 SHNHILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFE-----------PLLLKH 51
H +I+ L+G C + ++ E G L + + P E + K
Sbjct: 88 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 147
Query: 52 RLKIAMDIVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHIT 111
+ + + YL + + R+ +L E NV K+ DF L+ I +
Sbjct: 148 LVSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDI-NNIDYYK 203
Query: 112 DTVMGTL--GYCAPEYMRTGVFNEKSN 136
T G L + APE + V+ +S+
Sbjct: 204 KTTNGRLPVKWMAPEALFDRVYTHQSD 230
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 32.7 bits (73), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 66/141 (46%), Gaps = 17/141 (12%)
Query: 1 QMSHNHILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFEP---LLLKHRLKIAM 57
Q+ + +I+++IG C E +LV E + G L ++ L H + + L H++ + M
Sbjct: 62 QLDNPYIVRMIGIC-EAESWMLVMEMAELGPL-NKYL-QQNRHVKDKNIIELVHQVSMGM 118
Query: 58 DIVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMGT 117
+ ++H R + RN +L ++ AK+ DF LS ++ E + G
Sbjct: 119 KYLEESNFVH----RDLAARN-----VLLVTQHYAKISDFGLSKALRADENYYKAQTHGK 169
Query: 118 --LGYCAPEYMRTGVFNEKSN 136
+ + APE + F+ KS+
Sbjct: 170 WPVKWYAPECINYYKFSSKSD 190
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 32.7 bits (73), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 55/136 (40%), Gaps = 8/136 (5%)
Query: 1 QMSHNHILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIV 60
+ H HI+KLIG E P I + E YG L L + + L L + ++ I
Sbjct: 81 NLDHPHIVKLIGIIEEEPTWI-IMELYPYGEL-GHYLERNKNSLKVLTL---VLYSLQIC 135
Query: 61 HALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMGTLGY 120
A+AYL V R+ IL KL DF LS I + + + + +
Sbjct: 136 KAMAYLE---SINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKW 192
Query: 121 CAPEYMRTGVFNEKSN 136
+PE + F S+
Sbjct: 193 MSPESINFRRFTTASD 208
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 32.7 bits (73), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 67/141 (47%), Gaps = 17/141 (12%)
Query: 1 QMSHNHILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFEP---LLLKHRLKIAM 57
Q+ + +I+++IG C E +LV E + G L ++ L + H + + L H++ + M
Sbjct: 68 QLDNPYIVRMIGIC-EAESWMLVMEMAELGPL-NKYLQQNR-HVKDKNIIELVHQVSMGM 124
Query: 58 DIVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMGT 117
+ ++H R + RN +L ++ AK+ DF LS ++ E + G
Sbjct: 125 KYLEESNFVH----RDLAARN-----VLLVTQHYAKISDFGLSKALRADENYYKAQTHGK 175
Query: 118 --LGYCAPEYMRTGVFNEKSN 136
+ + APE + F+ KS+
Sbjct: 176 WPVKWYAPECINYYKFSSKSD 196
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 32.7 bits (73), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 31/147 (21%), Positives = 55/147 (37%), Gaps = 17/147 (11%)
Query: 3 SHNHILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFE-----------PLLLKH 51
H +I+ L+G C + ++ E G L + + P E + K
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 52 RLKIAMDIVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHIT 111
+ + + YL + + R+ +L E NV K+ DF L+ I +
Sbjct: 159 LVSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDI-NNIDYYK 214
Query: 112 DTVMGTL--GYCAPEYMRTGVFNEKSN 136
T G L + APE + V+ +S+
Sbjct: 215 KTTNGRLPVKWMAPEALFDRVYTHQSD 241
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 32.7 bits (73), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 33/71 (46%), Gaps = 13/71 (18%)
Query: 59 IVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMG-- 116
I+ L Y+H I+ R+ K S + NE++ K+ DF L+ H D + G
Sbjct: 136 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDSELKILDFGLA-------RHTDDEMTGYV 185
Query: 117 -TLGYCAPEYM 126
T Y APE M
Sbjct: 186 ATRWYRAPEIM 196
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 32.7 bits (73), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 67/141 (47%), Gaps = 17/141 (12%)
Query: 1 QMSHNHILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFEP---LLLKHRLKIAM 57
Q+ + +I+++IG C E +LV E + G L ++ L + H + + L H++ + M
Sbjct: 82 QLDNPYIVRMIGIC-EAESWMLVMEMAELGPL-NKYLQQNR-HVKDKNIIELVHQVSMGM 138
Query: 58 DIVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMGT 117
+ ++H R + RN +L ++ AK+ DF LS ++ E + G
Sbjct: 139 KYLEESNFVH----RDLAARN-----VLLVTQHYAKISDFGLSKALRADENYYKAQTHGK 189
Query: 118 --LGYCAPEYMRTGVFNEKSN 136
+ + APE + F+ KS+
Sbjct: 190 WPVKWYAPECINYYKFSSKSD 210
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 32.7 bits (73), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 67/141 (47%), Gaps = 17/141 (12%)
Query: 1 QMSHNHILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFEP---LLLKHRLKIAM 57
Q+ + +I+++IG C E +LV E + G L ++ L + H + + L H++ + M
Sbjct: 74 QLDNPYIVRMIGIC-EAESWMLVMEMAELGPL-NKYLQQNR-HVKDKNIIELVHQVSMGM 130
Query: 58 DIVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMGT 117
+ ++H R + RN +L ++ AK+ DF LS ++ E + G
Sbjct: 131 KYLEESNFVH----RDLAARN-----VLLVTQHYAKISDFGLSKALRADENYYKAQTHGK 181
Query: 118 --LGYCAPEYMRTGVFNEKSN 136
+ + APE + F+ KS+
Sbjct: 182 WPVKWYAPECINYYKFSSKSD 202
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 32.7 bits (73), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 33/71 (46%), Gaps = 13/71 (18%)
Query: 59 IVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMG-- 116
I+ L Y+H I+ R+ K S + NE++ K+ DF L+ H D + G
Sbjct: 140 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDSELKILDFGLA-------RHTDDEMTGYV 189
Query: 117 -TLGYCAPEYM 126
T Y APE M
Sbjct: 190 ATRWYRAPEIM 200
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 32.7 bits (73), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 30/69 (43%), Gaps = 3/69 (4%)
Query: 66 LHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMGTLGYCAPEY 125
LH+ R ++ R+ K +L + K+ DF S+ P + GTL Y PE
Sbjct: 127 LHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRR---XMCGTLDYLPPEM 183
Query: 126 MRTGVFNEK 134
+ +EK
Sbjct: 184 IEGKTHDEK 192
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 32.7 bits (73), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 60/138 (43%), Gaps = 11/138 (7%)
Query: 3 SHNHILKLIGCCLETP-IPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIVH 61
SH ++L L+G CL + P++V +++G L + I P +K + + +
Sbjct: 88 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH---NP-TVKDLIGFGLQVAK 143
Query: 62 ALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMGT---L 118
+ YL + V R+ + +E+ K+ DF L+ + + E G +
Sbjct: 144 GMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPV 200
Query: 119 GYCAPEYMRTGVFNEKSN 136
+ A E ++T F KS+
Sbjct: 201 KWMALESLQTQKFTTKSD 218
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 32.7 bits (73), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 30/69 (43%), Gaps = 3/69 (4%)
Query: 66 LHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMGTLGYCAPEY 125
LH+ R ++ R+ K +L + K+ DF S+ P + GTL Y PE
Sbjct: 127 LHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRR---XMCGTLDYLPPEM 183
Query: 126 MRTGVFNEK 134
+ +EK
Sbjct: 184 IEGKTHDEK 192
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 32.7 bits (73), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 30/69 (43%), Gaps = 3/69 (4%)
Query: 66 LHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMGTLGYCAPEY 125
LH+ R ++ R+ K +L + K+ DF S+ P + GTL Y PE
Sbjct: 128 LHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRR---XMCGTLDYLPPEM 184
Query: 126 MRTGVFNEK 134
+ +EK
Sbjct: 185 IEGKTHDEK 193
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 32.3 bits (72), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 31/147 (21%), Positives = 55/147 (37%), Gaps = 17/147 (11%)
Query: 3 SHNHILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFE-----------PLLLKH 51
H +I+ L+G C + ++ E G L + + P E + K
Sbjct: 99 KHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 52 RLKIAMDIVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHIT 111
+ + + YL + + R+ +L E NV K+ DF L+ I +
Sbjct: 159 LVSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDI-NNIDYYK 214
Query: 112 DTVMGTL--GYCAPEYMRTGVFNEKSN 136
T G L + APE + V+ +S+
Sbjct: 215 KTTNGRLPVKWMAPEALFDRVYTHQSD 241
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 32.3 bits (72), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 31/147 (21%), Positives = 55/147 (37%), Gaps = 17/147 (11%)
Query: 3 SHNHILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFE-----------PLLLKH 51
H +I+ L+G C + ++ E G L + + P E + K
Sbjct: 145 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 204
Query: 52 RLKIAMDIVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHIT 111
+ + + YL + + R+ +L E NV K+ DF L+ I +
Sbjct: 205 LVSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDI-NNIDYYK 260
Query: 112 DTVMGTL--GYCAPEYMRTGVFNEKSN 136
T G L + APE + V+ +S+
Sbjct: 261 KTTNGRLPVKWMAPEALFDRVYTHQSD 287
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 32.3 bits (72), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 33/75 (44%), Gaps = 4/75 (5%)
Query: 60 VHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMGTLG 119
+ AL +LH ++ RN K+ IL + KL DF I E T++GT
Sbjct: 127 LQALEFLH---SNQVIHRNIKSDNILLGMDGSVKLTDFGFCAQITP-EQSKRSTMVGTPY 182
Query: 120 YCAPEYMRTGVFNEK 134
+ APE + + K
Sbjct: 183 WMAPEVVTRKAYGPK 197
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 32.3 bits (72), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 5/72 (6%)
Query: 56 AMDIVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSL-SISIPEGETHITDTV 114
+IV AL YLH + +V+R+ K ++ +++ K+ DF L I +G T
Sbjct: 114 GAEIVSALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT--MKXF 169
Query: 115 MGTLGYCAPEYM 126
GT Y APE +
Sbjct: 170 CGTPEYLAPEVL 181
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 32.3 bits (72), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 5/72 (6%)
Query: 56 AMDIVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSL-SISIPEGETHITDTV 114
+IV AL YLH + +V+R+ K ++ +++ K+ DF L I +G T
Sbjct: 116 GAEIVSALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT--MKXF 171
Query: 115 MGTLGYCAPEYM 126
GT Y APE +
Sbjct: 172 CGTPEYLAPEVL 183
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 32.3 bits (72), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 58/126 (46%), Gaps = 9/126 (7%)
Query: 1 QMSHNHILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIV 60
++ H++I+KL +LVFE + ++L + E + K L + ++
Sbjct: 56 ELKHSNIVKLYDVIHTKKRLVLVFEHLDQDL--KKLLDVCEGGLESVTAKSFL---LQLL 110
Query: 61 HALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMGTLGY 120
+ +AY H R ++ R+ K +L N E K+ DF L+ + T ++ TL Y
Sbjct: 111 NGIAYCH---DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIV-TLWY 166
Query: 121 CAPEYM 126
AP+ +
Sbjct: 167 RAPDVL 172
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 32.3 bits (72), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 5/72 (6%)
Query: 56 AMDIVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSL-SISIPEGETHITDTV 114
+IV AL YLH + +V+R+ K ++ +++ K+ DF L I +G T
Sbjct: 115 GAEIVSALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT--MKXF 170
Query: 115 MGTLGYCAPEYM 126
GT Y APE +
Sbjct: 171 CGTPEYLAPEVL 182
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 32.3 bits (72), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 31/147 (21%), Positives = 55/147 (37%), Gaps = 17/147 (11%)
Query: 3 SHNHILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFE-----------PLLLKH 51
H +I+ L+G C + ++ E G L + + P E + K
Sbjct: 99 KHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 52 RLKIAMDIVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHIT 111
+ + + YL + + R+ +L E NV K+ DF L+ I +
Sbjct: 159 LVSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDI-NNIDYYK 214
Query: 112 DTVMGTL--GYCAPEYMRTGVFNEKSN 136
T G L + APE + V+ +S+
Sbjct: 215 KTTNGRLPVKWMAPEALFDRVYTHQSD 241
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 32.3 bits (72), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 13/71 (18%)
Query: 59 IVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMG-- 116
I+ L Y+H I+ R+ K S + NE+ K+ DF L+ H D + G
Sbjct: 134 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDXELKILDFGLA-------RHTDDEMTGYV 183
Query: 117 -TLGYCAPEYM 126
T Y APE M
Sbjct: 184 ATRWYRAPEIM 194
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 32.0 bits (71), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 13/71 (18%)
Query: 59 IVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMG-- 116
I+ L Y+H I+ R+ K S + NE+ K+ DF L+ H D + G
Sbjct: 139 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDXELKILDFGLA-------RHTDDEMTGYV 188
Query: 117 -TLGYCAPEYM 126
T Y APE M
Sbjct: 189 ATRWYRAPEIM 199
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 32.0 bits (71), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 13/71 (18%)
Query: 59 IVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMG-- 116
I+ L Y+H I+ R+ K S + NE+ K+ DF L+ H D + G
Sbjct: 145 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDXELKILDFGLA-------RHTDDEMTGYV 194
Query: 117 -TLGYCAPEYM 126
T Y APE M
Sbjct: 195 ATRWYRAPEIM 205
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 32.0 bits (71), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 13/71 (18%)
Query: 59 IVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMG-- 116
I+ L Y+H I+ R+ K S + NE+ K+ DF L+ H D + G
Sbjct: 139 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDXELKILDFGLA-------RHTDDEMTGYV 188
Query: 117 -TLGYCAPEYM 126
T Y APE M
Sbjct: 189 ATRWYRAPEIM 199
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 32.0 bits (71), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 4/68 (5%)
Query: 59 IVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMGTL 118
IV YLH ++ R+ K + NE+ K+ DF L+ + E + T+ GT
Sbjct: 126 IVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKV-EYDGERKKTLCGTP 181
Query: 119 GYCAPEYM 126
Y APE +
Sbjct: 182 NYIAPEVL 189
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 32.0 bits (71), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 4/68 (5%)
Query: 59 IVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMGTL 118
IV YLH ++ R+ K + NE+ K+ DF L+ + E + T+ GT
Sbjct: 130 IVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKV-EYDGERKKTLCGTP 185
Query: 119 GYCAPEYM 126
Y APE +
Sbjct: 186 NYIAPEVL 193
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 32.0 bits (71), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 31/147 (21%), Positives = 55/147 (37%), Gaps = 17/147 (11%)
Query: 3 SHNHILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFE-----------PLLLKH 51
H +I+ L+G C + ++ E G L + + P E + K
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKD 158
Query: 52 RLKIAMDIVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHIT 111
+ + + YL + + R+ +L E NV K+ DF L+ I +
Sbjct: 159 LVSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXX-K 214
Query: 112 DTVMGTL--GYCAPEYMRTGVFNEKSN 136
T G L + APE + V+ +S+
Sbjct: 215 KTTNGRLPVKWMAPEALFDRVYTHQSD 241
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 32.0 bits (71), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 31/147 (21%), Positives = 55/147 (37%), Gaps = 17/147 (11%)
Query: 3 SHNHILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFE-----------PLLLKH 51
H +I+ L+G C + ++ E G L + + P E + K
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 52 RLKIAMDIVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHIT 111
+ + + YL + + R+ +L E NV K+ DF L+ I +
Sbjct: 159 LVSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXX-K 214
Query: 112 DTVMGTL--GYCAPEYMRTGVFNEKSN 136
T G L + APE + V+ +S+
Sbjct: 215 KTTNGRLPVKWMAPEALFDRVYTHQSD 241
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 32.0 bits (71), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 4/68 (5%)
Query: 59 IVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMGTL 118
IV YLH ++ R+ K + NE+ K+ DF L+ + E + T+ GT
Sbjct: 126 IVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKV-EYDGERKKTLCGTP 181
Query: 119 GYCAPEYM 126
Y APE +
Sbjct: 182 NYIAPEVL 189
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 32.0 bits (71), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 67/141 (47%), Gaps = 17/141 (12%)
Query: 1 QMSHNHILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFEP---LLLKHRLKIAM 57
Q+ + +I+++IG C E +LV E + G L ++ L + H + + L H++ + M
Sbjct: 426 QLDNPYIVRMIGIC-EAESWMLVMEMAELGPL-NKYLQQNR-HVKDKNIIELVHQVSMGM 482
Query: 58 DIVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMGT 117
+ ++H R + RN +L ++ AK+ DF LS ++ E + G
Sbjct: 483 KYLEESNFVH----RDLAARN-----VLLVTQHYAKISDFGLSKALRADENYYKAQTHGK 533
Query: 118 --LGYCAPEYMRTGVFNEKSN 136
+ + APE + F+ KS+
Sbjct: 534 WPVKWYAPECINYYKFSSKSD 554
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 32.0 bits (71), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 44/97 (45%), Gaps = 14/97 (14%)
Query: 74 IVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMGTLGYCAPEYMRTGVFNE 133
++ R+ K + + + + KL DF L+ + E + V GT Y +PE M +NE
Sbjct: 137 VLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAKEFV-GTPYYMSPEQMNRMSYNE 195
Query: 134 KSNXXXXXXXXXXXXTGWDVSDLVKDVHDLVCPFSEY 170
KS+ W + L+ ++ L+ PF+ +
Sbjct: 196 KSDI-------------WSLGCLLYELCALMPPFTAF 219
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 32.0 bits (71), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 30/147 (20%), Positives = 55/147 (37%), Gaps = 17/147 (11%)
Query: 3 SHNHILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFE-----------PLLLKH 51
H +I+ L+G C + ++ E G L + + P E + K
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 52 RLKIAMDIVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHIT 111
+ + + YL + + R+ +L E NV ++ DF L+ I +
Sbjct: 159 LVSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMRIADFGLARDI-NNIDYYK 214
Query: 112 DTVMGTL--GYCAPEYMRTGVFNEKSN 136
T G L + APE + V+ +S+
Sbjct: 215 KTTNGRLPVKWMAPEALFDRVYTHQSD 241
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 31.6 bits (70), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 29/136 (21%), Positives = 60/136 (44%), Gaps = 9/136 (6%)
Query: 2 MSHNHILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIVH 61
+ H HI++L+G C + + LV + + G+L D + + H L + L + I
Sbjct: 90 LDHAHIVRLLGLCPGSSLQ-LVTQYLPLGSLLDHV----RQHRGALGPQLLLNWGVQIAK 144
Query: 62 ALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMGT-LGY 120
+ YL +V RN +L + ++ DF ++ +P + + + T + +
Sbjct: 145 GMYYLE---EHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKW 201
Query: 121 CAPEYMRTGVFNEKSN 136
A E + G + +S+
Sbjct: 202 MALESIHFGKYTHQSD 217
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 31.6 bits (70), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 29/136 (21%), Positives = 60/136 (44%), Gaps = 9/136 (6%)
Query: 2 MSHNHILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIVH 61
+ H HI++L+G C + + LV + + G+L D + + H L + L + I
Sbjct: 72 LDHAHIVRLLGLCPGSSLQ-LVTQYLPLGSLLDHV----RQHRGALGPQLLLNWGVQIAK 126
Query: 62 ALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMGT-LGY 120
+ YL +V RN +L + ++ DF ++ +P + + + T + +
Sbjct: 127 GMYYLE---EHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKW 183
Query: 121 CAPEYMRTGVFNEKSN 136
A E + G + +S+
Sbjct: 184 MALESIHFGKYTHQSD 199
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 31.6 bits (70), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 67/141 (47%), Gaps = 17/141 (12%)
Query: 1 QMSHNHILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFEP---LLLKHRLKIAM 57
Q+ + +I+++IG C E +LV E + G L ++ L + H + + L H++ + M
Sbjct: 427 QLDNPYIVRMIGIC-EAESWMLVMEMAELGPL-NKYLQQNR-HVKDKNIIELVHQVSMGM 483
Query: 58 DIVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMGT 117
+ ++H R + RN +L ++ AK+ DF LS ++ E + G
Sbjct: 484 KYLEESNFVH----RDLAARN-----VLLVTQHYAKISDFGLSKALRADENYYKAQTHGK 534
Query: 118 --LGYCAPEYMRTGVFNEKSN 136
+ + APE + F+ KS+
Sbjct: 535 WPVKWYAPECINYYKFSSKSD 555
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 31.6 bits (70), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 56/142 (39%), Gaps = 15/142 (10%)
Query: 1 QMSHNHILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIV 60
Q H +I++L G + +P+++ D L F + L L+ +
Sbjct: 73 QFEHPNIIRLEGVVTNS-MPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGM 131
Query: 61 HALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMGTLG- 119
LA + + V R+ IL N V K+ DF LS + E + T+T +LG
Sbjct: 132 RYLAEMSY------VHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTET--SSLGG 183
Query: 120 -----YCAPEYMRTGVFNEKSN 136
+ APE + F S+
Sbjct: 184 KIPIRWTAPEAIAFRKFTSASD 205
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 31.6 bits (70), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 13/71 (18%)
Query: 59 IVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMG-- 116
I+ L Y+H I+ R+ K S + NE++ K+ DF L H D + G
Sbjct: 134 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDSELKILDFGLC-------RHTDDEMTGYV 183
Query: 117 -TLGYCAPEYM 126
T Y APE M
Sbjct: 184 ATRWYRAPEIM 194
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 31.6 bits (70), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 13/71 (18%)
Query: 59 IVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMG-- 116
I+ L Y+H I+ R+ K S + NE+ K+ DF L+ H D + G
Sbjct: 141 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTADEMTGYV 190
Query: 117 -TLGYCAPEYM 126
T Y APE M
Sbjct: 191 ATRWYRAPEIM 201
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 31.2 bits (69), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 13/71 (18%)
Query: 59 IVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMG-- 116
I+ L Y+H I+ R+ K S + NE+ K+ DF L+ H D + G
Sbjct: 141 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTADEMTGYV 190
Query: 117 -TLGYCAPEYM 126
T Y APE M
Sbjct: 191 ATRWYRAPEIM 201
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 31.2 bits (69), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 13/71 (18%)
Query: 59 IVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMG-- 116
I+ L Y+H I+ R+ K S + NE+ K+ DF L+ H D + G
Sbjct: 141 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTADEMTGYV 190
Query: 117 -TLGYCAPEYM 126
T Y APE M
Sbjct: 191 ATRWYRAPEIM 201
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 31.2 bits (69), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 34/73 (46%), Gaps = 4/73 (5%)
Query: 54 KIAMDIVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDT 113
KIA+ IV AL +LH ++ R+ K S +L N K DF +S + + D
Sbjct: 140 KIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDIDA 197
Query: 114 VMGTLGYCAPEYM 126
G Y APE +
Sbjct: 198 --GCKPYXAPERI 208
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 31.2 bits (69), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 7/68 (10%)
Query: 59 IVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMGTL 118
++ L Y+H I+ R+ K S + NE++ ++ DF L+ E T + T
Sbjct: 140 LLRGLKYIHSA---GIIHRDLKPSNVAVNEDSELRILDFGLARQADEEMT----GYVATR 192
Query: 119 GYCAPEYM 126
Y APE M
Sbjct: 193 WYRAPEIM 200
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 31.2 bits (69), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 7/68 (10%)
Query: 59 IVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMGTL 118
++ L Y+H I+ R+ K S + NE++ ++ DF L+ E T + T
Sbjct: 140 LLRGLKYIHSA---GIIHRDLKPSNVAVNEDSELRILDFGLARQADEEMT----GYVATR 192
Query: 119 GYCAPEYM 126
Y APE M
Sbjct: 193 WYRAPEIM 200
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 31.2 bits (69), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 13/71 (18%)
Query: 59 IVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMG-- 116
I+ L Y+H I+ R+ K S + NE+ K+ DF L+ H D + G
Sbjct: 154 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMXGXV 203
Query: 117 -TLGYCAPEYM 126
T Y APE M
Sbjct: 204 ATRWYRAPEIM 214
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 30.8 bits (68), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 13/71 (18%)
Query: 59 IVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMG-- 116
I+ L Y+H I+ R+ K S + NE+ K+ DF L+ H D + G
Sbjct: 134 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGYV 183
Query: 117 -TLGYCAPEYM 126
T Y APE M
Sbjct: 184 ATRWYRAPEIM 194
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 30.8 bits (68), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 13/71 (18%)
Query: 59 IVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMG-- 116
I+ L Y+H I+ R+ K S + NE+ K+ DF L+ H D + G
Sbjct: 134 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGYV 183
Query: 117 -TLGYCAPEYM 126
T Y APE M
Sbjct: 184 ATRWYRAPEIM 194
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 30.8 bits (68), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 13/71 (18%)
Query: 59 IVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMG-- 116
I+ L Y+H I+ R+ K S + NE+ K+ DF L+ H D + G
Sbjct: 144 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGYV 193
Query: 117 -TLGYCAPEYM 126
T Y APE M
Sbjct: 194 ATRWYRAPEIM 204
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 30.8 bits (68), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 13/71 (18%)
Query: 59 IVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMG-- 116
I+ L Y+H I+ R+ K S + NE+ K+ DF L+ H D + G
Sbjct: 134 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGYV 183
Query: 117 -TLGYCAPEYM 126
T Y APE M
Sbjct: 184 ATRWYRAPEIM 194
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 30.8 bits (68), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 13/71 (18%)
Query: 59 IVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMG-- 116
I+ L Y+H I+ R+ K S + NE+ K+ DF L+ H D + G
Sbjct: 146 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGYV 195
Query: 117 -TLGYCAPEYM 126
T Y APE M
Sbjct: 196 ATRWYRAPEIM 206
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 30.8 bits (68), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 13/71 (18%)
Query: 59 IVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMG-- 116
I+ L Y+H I+ R+ K S + NE+ K+ DF L+ H D + G
Sbjct: 140 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGYV 189
Query: 117 -TLGYCAPEYM 126
T Y APE M
Sbjct: 190 ATRWYRAPEIM 200
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 30.8 bits (68), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 13/71 (18%)
Query: 59 IVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMG-- 116
I+ L Y+H I+ R+ K S + NE+ K+ DF L+ H D + G
Sbjct: 146 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGYV 195
Query: 117 -TLGYCAPEYM 126
T Y APE M
Sbjct: 196 ATRWYRAPEIM 206
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 30.8 bits (68), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 13/71 (18%)
Query: 59 IVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMG-- 116
I+ L Y+H I+ R+ K S + NE+ K+ DF L+ H D + G
Sbjct: 146 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGYV 195
Query: 117 -TLGYCAPEYM 126
T Y APE M
Sbjct: 196 ATRWYRAPEIM 206
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 30.8 bits (68), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 13/71 (18%)
Query: 59 IVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMG-- 116
I+ L Y+H I+ R+ K S + NE+ K+ DF L+ H D + G
Sbjct: 134 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGYV 183
Query: 117 -TLGYCAPEYM 126
T Y APE M
Sbjct: 184 ATRWYRAPEIM 194
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 30.8 bits (68), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 13/71 (18%)
Query: 59 IVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMG-- 116
I+ L Y+H I+ R+ K S + NE+ K+ DF L+ H D + G
Sbjct: 134 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGYV 183
Query: 117 -TLGYCAPEYM 126
T Y APE M
Sbjct: 184 ATRWYRAPEIM 194
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 30.8 bits (68), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 13/71 (18%)
Query: 59 IVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMG-- 116
I+ L Y+H I+ R+ K S + NE+ K+ DF L+ H D + G
Sbjct: 145 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGYV 194
Query: 117 -TLGYCAPEYM 126
T Y APE M
Sbjct: 195 ATRWYRAPEIM 205
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 30.8 bits (68), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 13/71 (18%)
Query: 59 IVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMG-- 116
I+ L Y+H I+ R+ K S + NE+ K+ DF L+ H D + G
Sbjct: 139 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGYV 188
Query: 117 -TLGYCAPEYM 126
T Y APE M
Sbjct: 189 ATRWYRAPEIM 199
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 30.8 bits (68), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 13/71 (18%)
Query: 59 IVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMG-- 116
I+ L Y+H I+ R+ K S + NE+ K+ DF L+ H D + G
Sbjct: 134 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMAGFV 183
Query: 117 -TLGYCAPEYM 126
T Y APE M
Sbjct: 184 ATRWYRAPEIM 194
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 30.8 bits (68), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 13/71 (18%)
Query: 59 IVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMG-- 116
I+ L Y+H I+ R+ K S + NE+ K+ DF L+ H D + G
Sbjct: 136 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGYV 185
Query: 117 -TLGYCAPEYM 126
T Y APE M
Sbjct: 186 ATRWYRAPEIM 196
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 30.8 bits (68), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 13/71 (18%)
Query: 59 IVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMG-- 116
I+ L Y+H I+ R+ K S + NE+ K+ DF L+ H D + G
Sbjct: 133 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGYV 182
Query: 117 -TLGYCAPEYM 126
T Y APE M
Sbjct: 183 ATRWYRAPEIM 193
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 30.8 bits (68), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 30/65 (46%), Gaps = 4/65 (6%)
Query: 60 VHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMGTLG 119
+ AL YLH I+ R+ K ILF + KL DF +S D+ +GT
Sbjct: 145 LDALNYLH---DNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTR-XIQRRDSFIGTPY 200
Query: 120 YCAPE 124
+ APE
Sbjct: 201 WMAPE 205
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 30.8 bits (68), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 13/71 (18%)
Query: 59 IVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMG-- 116
I+ L Y+H I+ R+ K S + NE+ K+ DF L+ H D + G
Sbjct: 136 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGYV 185
Query: 117 -TLGYCAPEYM 126
T Y APE M
Sbjct: 186 ATRWYRAPEIM 196
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 30.8 bits (68), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 13/71 (18%)
Query: 59 IVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMG-- 116
I+ L Y+H I+ R+ K S + NE+ K+ DF L+ H D + G
Sbjct: 141 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGYV 190
Query: 117 -TLGYCAPEYM 126
T Y APE M
Sbjct: 191 ATRWYRAPEIM 201
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 30.8 bits (68), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 13/71 (18%)
Query: 59 IVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMG-- 116
I+ L Y+H I+ R+ K S + NE+ K+ DF L+ H D + G
Sbjct: 153 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGYV 202
Query: 117 -TLGYCAPEYM 126
T Y APE M
Sbjct: 203 ATRWYRAPEIM 213
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 30.8 bits (68), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 13/71 (18%)
Query: 59 IVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMG-- 116
I+ L Y+H I+ R+ K S + NE+ K+ DF L+ H D + G
Sbjct: 134 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMAGFV 183
Query: 117 -TLGYCAPEYM 126
T Y APE M
Sbjct: 184 ATRWYRAPEIM 194
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 30.8 bits (68), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 13/71 (18%)
Query: 59 IVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMG-- 116
I+ L Y+H I+ R+ K S + NE+ K+ DF L+ H D + G
Sbjct: 154 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGYV 203
Query: 117 -TLGYCAPEYM 126
T Y APE M
Sbjct: 204 ATRWYRAPEIM 214
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 30.8 bits (68), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 13/71 (18%)
Query: 59 IVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMG-- 116
I+ L Y+H I+ R+ K S + NE+ K+ DF L+ H D + G
Sbjct: 134 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGYV 183
Query: 117 -TLGYCAPEYM 126
T Y APE M
Sbjct: 184 ATRWYRAPEIM 194
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 30.8 bits (68), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 13/71 (18%)
Query: 59 IVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMG-- 116
I+ L Y+H I+ R+ K S + NE+ K+ DF L+ H D + G
Sbjct: 154 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGYV 203
Query: 117 -TLGYCAPEYM 126
T Y APE M
Sbjct: 204 ATRWYRAPEIM 214
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 30.8 bits (68), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 13/71 (18%)
Query: 59 IVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMG-- 116
I+ L Y+H I+ R+ K S + NE+ K+ DF L+ H D + G
Sbjct: 136 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGYV 185
Query: 117 -TLGYCAPEYM 126
T Y APE M
Sbjct: 186 ATRWYRAPEIM 196
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 30.8 bits (68), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 30/65 (46%), Gaps = 4/65 (6%)
Query: 60 VHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMGTLG 119
+ AL YLH I+ R+ K ILF + KL DF +S D+ +GT
Sbjct: 145 LDALNYLH---DNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRT-IQRRDSFIGTPY 200
Query: 120 YCAPE 124
+ APE
Sbjct: 201 WMAPE 205
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 30.8 bits (68), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 13/71 (18%)
Query: 59 IVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMG-- 116
I+ L Y+H I+ R+ K S + NE+ K+ DF L+ H D + G
Sbjct: 153 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGYV 202
Query: 117 -TLGYCAPEYM 126
T Y APE M
Sbjct: 203 ATRWYRAPEIM 213
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 30.8 bits (68), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 13/71 (18%)
Query: 59 IVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMG-- 116
I+ L Y+H I+ R+ K S + NE+ K+ DF L+ H D + G
Sbjct: 134 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGYV 183
Query: 117 -TLGYCAPEYM 126
T Y APE M
Sbjct: 184 ATRWYRAPEIM 194
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 30.8 bits (68), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 13/71 (18%)
Query: 59 IVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMG-- 116
I+ L Y+H I+ R+ K S + NE+ K+ DF L+ H D + G
Sbjct: 157 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGYV 206
Query: 117 -TLGYCAPEYM 126
T Y APE M
Sbjct: 207 ATRWYRAPEIM 217
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 30.8 bits (68), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 13/71 (18%)
Query: 59 IVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMG-- 116
I+ L Y+H I+ R+ K S + NE+ K+ DF L+ H D + G
Sbjct: 134 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGXV 183
Query: 117 -TLGYCAPEYM 126
T Y APE M
Sbjct: 184 ATRWYRAPEIM 194
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 30.8 bits (68), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 13/71 (18%)
Query: 59 IVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMG-- 116
I+ L Y+H I+ R+ K S + NE+ K+ DF L+ H D + G
Sbjct: 134 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGYV 183
Query: 117 -TLGYCAPEYM 126
T Y APE M
Sbjct: 184 ATRWYRAPEIM 194
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 30.8 bits (68), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 13/71 (18%)
Query: 59 IVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMG-- 116
I+ L Y+H I+ R+ K S + NE+ K+ DF L+ H D + G
Sbjct: 140 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGYV 189
Query: 117 -TLGYCAPEYM 126
T Y APE M
Sbjct: 190 ATRWYRAPEIM 200
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 30.8 bits (68), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 13/71 (18%)
Query: 59 IVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMG-- 116
I+ L Y+H I+ R+ K S + NE+ K+ DF L+ H D + G
Sbjct: 134 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGYV 183
Query: 117 -TLGYCAPEYM 126
T Y APE M
Sbjct: 184 ATRWYRAPEIM 194
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 30.8 bits (68), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 13/71 (18%)
Query: 59 IVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMG-- 116
I+ L Y+H I+ R+ K S + NE+ K+ DF L+ H D + G
Sbjct: 140 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGYV 189
Query: 117 -TLGYCAPEYM 126
T Y APE M
Sbjct: 190 ATRWYRAPEIM 200
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 30.8 bits (68), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 13/71 (18%)
Query: 59 IVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMG-- 116
I+ L Y+H I+ R+ K S + NE+ K+ DF L+ H D + G
Sbjct: 157 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMXGYV 206
Query: 117 -TLGYCAPEYM 126
T Y APE M
Sbjct: 207 ATRWYRAPEIM 217
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 30.8 bits (68), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 13/71 (18%)
Query: 59 IVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMG-- 116
I+ L Y+H I+ R+ K S + NE+ K+ DF L+ H D + G
Sbjct: 134 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGYV 183
Query: 117 -TLGYCAPEYM 126
T Y APE M
Sbjct: 184 ATRWYRAPEIM 194
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 30.8 bits (68), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 13/71 (18%)
Query: 59 IVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMG-- 116
I+ L Y+H I+ R+ K S + NE+ K+ DF L+ H D + G
Sbjct: 139 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGYV 188
Query: 117 -TLGYCAPEYM 126
T Y APE M
Sbjct: 189 ATRWYRAPEIM 199
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 30.8 bits (68), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 48/106 (45%), Gaps = 10/106 (9%)
Query: 6 HILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIVHALAY 65
H+ +L+G CL + + L+ + + +G L D + + H + + ++ L + I + Y
Sbjct: 79 HVCRLLGICLTSTVQ-LIMQLMPFGXLLDYV----REHKDNIGSQYLLNWCVQIAKGMNY 133
Query: 66 LHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLS--ISIPEGETH 109
L R +V R+ +L K+ DF L+ + E E H
Sbjct: 134 LE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH 176
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 30.8 bits (68), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 13/71 (18%)
Query: 59 IVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMG-- 116
I+ L Y+H I+ R+ K S + NE+ K+ DF L+ H D + G
Sbjct: 131 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGYV 180
Query: 117 -TLGYCAPEYM 126
T Y APE M
Sbjct: 181 ATRWYRAPEIM 191
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 30.8 bits (68), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 13/71 (18%)
Query: 59 IVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMG-- 116
I+ L Y+H I+ R+ K S + NE+ K+ DF L+ H D + G
Sbjct: 131 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGYV 180
Query: 117 -TLGYCAPEYM 126
T Y APE M
Sbjct: 181 ATRWYRAPEIM 191
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 30.8 bits (68), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 14/74 (18%)
Query: 56 AMDIVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVM 115
A +I L +LH R I++R+ K ++ + E K+ DF + + H+ D V
Sbjct: 126 AAEISIGLFFLH---KRGIIYRDLKLDNVMLDSEGHIKIADFGMC------KEHMMDGVT 176
Query: 116 -----GTLGYCAPE 124
GT Y APE
Sbjct: 177 TREFCGTPDYIAPE 190
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 30.8 bits (68), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 13/71 (18%)
Query: 59 IVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMG-- 116
I+ L Y+H I+ R+ K S + NE+ K+ DF L+ H D + G
Sbjct: 163 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGYV 212
Query: 117 -TLGYCAPEYM 126
T Y APE M
Sbjct: 213 ATRWYRAPEIM 223
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 30.8 bits (68), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 13/71 (18%)
Query: 59 IVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMG-- 116
I+ L Y+H I+ R+ K S + NE+ K+ DF L+ H D + G
Sbjct: 130 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGYV 179
Query: 117 -TLGYCAPEYM 126
T Y APE M
Sbjct: 180 ATRWYRAPEIM 190
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 30.8 bits (68), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 13/71 (18%)
Query: 59 IVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMG-- 116
I+ L Y+H I+ R+ K S + NE+ K+ DF L+ H D + G
Sbjct: 130 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGYV 179
Query: 117 -TLGYCAPEYM 126
T Y APE M
Sbjct: 180 ATRWYRAPEIM 190
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 30.4 bits (67), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 13/71 (18%)
Query: 59 IVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMG-- 116
I+ L Y+H I+ R+ K S + NE+ K+ DF L+ H D + G
Sbjct: 130 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMAGFV 179
Query: 117 -TLGYCAPEYM 126
T Y APE M
Sbjct: 180 ATRWYRAPEIM 190
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 30.4 bits (67), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 62/152 (40%), Gaps = 22/152 (14%)
Query: 4 HNHILKLIGCCLETPIPILVFESVQYGTLWD-------RILG---APQPHFE-------- 45
H +I+ L+G C +++ E YG L + +LG AP E
Sbjct: 94 HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGR 153
Query: 46 PLLLKHRLKIAMDIVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPE 105
PL L+ L + + +A+L + + R+ +L +VAK+ DF L+ I
Sbjct: 154 PLELRDLLHFSSQVAQGMAFLA---SKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMN 210
Query: 106 GETHIT-DTVMGTLGYCAPEYMRTGVFNEKSN 136
+I + + APE + V+ +S+
Sbjct: 211 DSNYIVKGNARLPVKWMAPESIFDCVYTVQSD 242
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 30.4 bits (67), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 48/106 (45%), Gaps = 10/106 (9%)
Query: 6 HILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIVHALAY 65
H+ +L+G CL + + L+ + + +G L D + + H + + ++ L + I + Y
Sbjct: 80 HVCRLLGICLTSTVQ-LIMQLMPFGCLLDYV----REHKDNIGSQYLLNWCVQIAKGMNY 134
Query: 66 LHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLS--ISIPEGETH 109
L R +V R+ +L K+ DF L+ + E E H
Sbjct: 135 LE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH 177
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 30.4 bits (67), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 9/79 (11%)
Query: 51 HRLKIAM-DIVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSL--SISIPEGE 107
H +K+ + ++ LAY H + ++ R+ K +L NE KL DF L + SIP
Sbjct: 100 HNVKLFLFQLLRGLAYCH---RQKVLHRDLKPQNLLINERGELKLADFGLARAKSIP--- 153
Query: 108 THITDTVMGTLGYCAPEYM 126
T D + TL Y P+ +
Sbjct: 154 TKTYDNEVVTLWYRPPDIL 172
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 30.4 bits (67), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 13/71 (18%)
Query: 59 IVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMG-- 116
I+ L Y+H I+ R+ K S + NE+ K+ DF L+ H D + G
Sbjct: 132 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGYV 181
Query: 117 -TLGYCAPEYM 126
T Y APE M
Sbjct: 182 ATRWYRAPEIM 192
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 30.4 bits (67), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 13/71 (18%)
Query: 59 IVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMG-- 116
I+ L Y+H I+ R+ K S + NE+ K+ DF L+ H D + G
Sbjct: 130 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGYV 179
Query: 117 -TLGYCAPEYM 126
T Y APE M
Sbjct: 180 ATRWYRAPEIM 190
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 30.4 bits (67), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 30/147 (20%), Positives = 54/147 (36%), Gaps = 17/147 (11%)
Query: 3 SHNHILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFE-----------PLLLKH 51
H +I+ L+G C + ++ G L + + P E + K
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 52 RLKIAMDIVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHIT 111
+ + + YL + + R+ +L E NV K+ DF L+ I +
Sbjct: 159 LVSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDI-NNIDYYK 214
Query: 112 DTVMGTL--GYCAPEYMRTGVFNEKSN 136
T G L + APE + V+ +S+
Sbjct: 215 KTTNGRLPVKWMAPEALFDRVYTHQSD 241
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 30.4 bits (67), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 39/78 (50%), Gaps = 7/78 (8%)
Query: 56 AMDIVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVM 115
A IV YLH +++R+ K ++ +++ K+ DF L+ + +G T +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGLAKRV-KGRTW---XLC 199
Query: 116 GTLGYCAPEYMRTGVFNE 133
GT Y APE + + +N+
Sbjct: 200 GTPEYLAPEIILSKGYNK 217
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 30.4 bits (67), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 48/106 (45%), Gaps = 10/106 (9%)
Query: 6 HILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIVHALAY 65
H+ +L+G CL + + L+ + + +G L D + + H + + ++ L + I + Y
Sbjct: 81 HVCRLLGICLTSTVQ-LIMQLMPFGCLLDYV----REHKDNIGSQYLLNWCVQIAKGMNY 135
Query: 66 LHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLS--ISIPEGETH 109
L R +V R+ +L K+ DF L+ + E E H
Sbjct: 136 LE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH 178
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 30.4 bits (67), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 48/106 (45%), Gaps = 10/106 (9%)
Query: 6 HILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIVHALAY 65
H+ +L+G CL + + L+ + + +G L D + + H + + ++ L + I + Y
Sbjct: 79 HVCRLLGICLTSTVQ-LIMQLMPFGCLLDYV----REHKDNIGSQYLLNWCVQIAKGMNY 133
Query: 66 LHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLS--ISIPEGETH 109
L R +V R+ +L K+ DF L+ + E E H
Sbjct: 134 LE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH 176
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 30.4 bits (67), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Query: 46 PLLLKHRLKIAMDIVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISI 103
PL LKI A+ ++H P PI+ R+ K +L + + KL DF + +I
Sbjct: 132 PLSCDTVLKIFYQTCRAVQHMHRQKP-PIIHRDLKVENLLLSNQGTIKLCDFGSATTI 188
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 30.4 bits (67), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 59/138 (42%), Gaps = 11/138 (7%)
Query: 3 SHNHILKLIGCCLET-PIPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIVH 61
SH ++L L+G CL + P++V +++G L + I L+ L++A
Sbjct: 89 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKG--- 145
Query: 62 ALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMGT---L 118
+ F + V R+ + +E+ K+ DF L+ + + E G +
Sbjct: 146 ----MKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPV 201
Query: 119 GYCAPEYMRTGVFNEKSN 136
+ A E ++T F KS+
Sbjct: 202 KWMALESLQTQKFTTKSD 219
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 30.4 bits (67), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 48/106 (45%), Gaps = 10/106 (9%)
Query: 6 HILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIVHALAY 65
H+ +L+G CL + + L+ + + +G L D + + H + + ++ L + I + Y
Sbjct: 85 HVCRLLGICLTSTVQ-LIMQLMPFGCLLDYV----REHKDNIGSQYLLNWCVQIAKGMNY 139
Query: 66 LHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLS--ISIPEGETH 109
L R +V R+ +L K+ DF L+ + E E H
Sbjct: 140 LE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH 182
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 30.4 bits (67), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 28/130 (21%), Positives = 57/130 (43%), Gaps = 18/130 (13%)
Query: 3 SHNHILKLIGCCLETPI--PILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIV 60
SH ++L ++G C P P L+ + YG+L++ + + +K A+D+
Sbjct: 65 SHPNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVD---QSQAVKFALDMA 121
Query: 61 HALAYLHFGFPRPIVFRN-FKTSCILFNEENVAK--LFDFSLSISIPEGETHITDTVMGT 117
+A+LH P++ R+ + ++ +E+ A+ + D S P M
Sbjct: 122 RGMAFLHTL--EPLIPRHALNSRSVMIDEDMTARISMADVKFSFQSP--------GRMYA 171
Query: 118 LGYCAPEYMR 127
+ APE ++
Sbjct: 172 PAWVAPEALQ 181
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 30.4 bits (67), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 59/138 (42%), Gaps = 11/138 (7%)
Query: 3 SHNHILKLIGCCLETP-IPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIVH 61
SH ++L L+G CL + P++V +++G L + I L+ L++A
Sbjct: 87 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKG--- 143
Query: 62 ALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMGT---L 118
+ F + V R+ + +E+ K+ DF L+ + + E G +
Sbjct: 144 ----MKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPV 199
Query: 119 GYCAPEYMRTGVFNEKSN 136
+ A E ++T F KS+
Sbjct: 200 KWMALESLQTQKFTTKSD 217
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 30.4 bits (67), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 18/74 (24%), Positives = 34/74 (45%), Gaps = 9/74 (12%)
Query: 55 IAMDIVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTV 114
+A+D +H L Y+H R+ K +L + +L DF + + + T +
Sbjct: 186 LAIDSIHQLHYVH---------RDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVA 236
Query: 115 MGTLGYCAPEYMRT 128
+GT Y +PE ++
Sbjct: 237 VGTPDYISPEILQA 250
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 30.4 bits (67), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 48/106 (45%), Gaps = 10/106 (9%)
Query: 6 HILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIVHALAY 65
H+ +L+G CL + + L+ + + +G L D + + H + + ++ L + I + Y
Sbjct: 82 HVCRLLGICLTSTVQ-LIMQLMPFGCLLDYV----REHKDNIGSQYLLNWCVQIAKGMNY 136
Query: 66 LHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLS--ISIPEGETH 109
L R +V R+ +L K+ DF L+ + E E H
Sbjct: 137 LE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH 179
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 30.4 bits (67), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 59/138 (42%), Gaps = 11/138 (7%)
Query: 3 SHNHILKLIGCCLET-PIPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIVH 61
SH ++L L+G CL + P++V +++G L + I L+ L++A
Sbjct: 90 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKG--- 146
Query: 62 ALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMGT---L 118
+ F + V R+ + +E+ K+ DF L+ + + E G +
Sbjct: 147 ----MKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPV 202
Query: 119 GYCAPEYMRTGVFNEKSN 136
+ A E ++T F KS+
Sbjct: 203 KWMALESLQTQKFTTKSD 220
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 30.4 bits (67), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 59/138 (42%), Gaps = 11/138 (7%)
Query: 3 SHNHILKLIGCCLET-PIPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIVH 61
SH ++L L+G CL + P++V +++G L + I L+ L++A
Sbjct: 90 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKG--- 146
Query: 62 ALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMGT---L 118
+ F + V R+ + +E+ K+ DF L+ + + E G +
Sbjct: 147 ----MKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPV 202
Query: 119 GYCAPEYMRTGVFNEKSN 136
+ A E ++T F KS+
Sbjct: 203 KWMALESLQTQKFTTKSD 220
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 30.4 bits (67), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 48/106 (45%), Gaps = 10/106 (9%)
Query: 6 HILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIVHALAY 65
H+ +L+G CL + + L+ + + +G L D + + H + + ++ L + I + Y
Sbjct: 78 HVCRLLGICLTSTVQ-LIMQLMPFGCLLDYV----REHKDNIGSQYLLNWCVQIAKGMNY 132
Query: 66 LHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLS--ISIPEGETH 109
L R +V R+ +L K+ DF L+ + E E H
Sbjct: 133 LE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH 175
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 30.4 bits (67), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 31/68 (45%), Gaps = 4/68 (5%)
Query: 59 IVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMGTL 118
IV YLH ++ R+ K + NE+ K+ DF L+ + E + + GT
Sbjct: 148 IVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKV-EYDGERKKVLCGTP 203
Query: 119 GYCAPEYM 126
Y APE +
Sbjct: 204 NYIAPEVL 211
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 30.4 bits (67), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 18/74 (24%), Positives = 34/74 (45%), Gaps = 9/74 (12%)
Query: 55 IAMDIVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTV 114
+A+D +H L Y+H R+ K +L + +L DF + + + T +
Sbjct: 202 LAIDSIHQLHYVH---------RDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVA 252
Query: 115 MGTLGYCAPEYMRT 128
+GT Y +PE ++
Sbjct: 253 VGTPDYISPEILQA 266
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 30.4 bits (67), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 30/138 (21%), Positives = 60/138 (43%), Gaps = 11/138 (7%)
Query: 3 SHNHILKLIGCCLET-PIPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIVH 61
SH ++L L+G CL + P++V +++G L + I P +K + + +
Sbjct: 89 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH---NP-TVKDLIGFGLQVAK 144
Query: 62 ALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMGT---L 118
+ +L + V R+ + +E+ K+ DF L+ + + E G +
Sbjct: 145 GMKFLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPV 201
Query: 119 GYCAPEYMRTGVFNEKSN 136
+ A E ++T F KS+
Sbjct: 202 KWMALESLQTQKFTTKSD 219
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 30.0 bits (66), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 31/68 (45%), Gaps = 4/68 (5%)
Query: 59 IVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMGTL 118
IV YLH ++ R+ K + NE+ K+ DF L+ + E + + GT
Sbjct: 150 IVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKV-EYDGERKKVLCGTP 205
Query: 119 GYCAPEYM 126
Y APE +
Sbjct: 206 NYIAPEVL 213
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 30/147 (20%), Positives = 54/147 (36%), Gaps = 17/147 (11%)
Query: 3 SHNHILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFE-----------PLLLKH 51
H +I+ L+G C + ++ G L + + P E + K
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 52 RLKIAMDIVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHIT 111
+ + + YL + + R+ +L E NV K+ DF L+ I +
Sbjct: 159 LVSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDI-NNIDYYK 214
Query: 112 DTVMGTL--GYCAPEYMRTGVFNEKSN 136
T G L + APE + V+ +S+
Sbjct: 215 KTTNGRLPVKWMAPEALFDRVYTHQSD 241
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 30/138 (21%), Positives = 60/138 (43%), Gaps = 11/138 (7%)
Query: 3 SHNHILKLIGCCLET-PIPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIVH 61
SH ++L L+G CL + P++V +++G L + I P +K + + +
Sbjct: 94 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH---NP-TVKDLIGFGLQVAK 149
Query: 62 ALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMGT---L 118
+ +L + V R+ + +E+ K+ DF L+ + + E G +
Sbjct: 150 GMKFLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPV 206
Query: 119 GYCAPEYMRTGVFNEKSN 136
+ A E ++T F KS+
Sbjct: 207 KWMALESLQTQKFTTKSD 224
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 40/92 (43%), Gaps = 20/92 (21%)
Query: 39 APQPHFEPLL-LKHRLKIAMDIVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDF 97
AP+ ++ L L+H + + + + +L R + R+ IL +E+NV K+ DF
Sbjct: 179 APEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDF 235
Query: 98 SLSISIPEGETHITDTVMGTLGYCAPEYMRTG 129
L+ I Y P+Y+R G
Sbjct: 236 GLARDI----------------YKDPDYVRKG 251
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 40/92 (43%), Gaps = 20/92 (21%)
Query: 39 APQPHFEPLL-LKHRLKIAMDIVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDF 97
AP+ ++ L L+H + + + + +L R + R+ IL +E+NV K+ DF
Sbjct: 188 APEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDF 244
Query: 98 SLSISIPEGETHITDTVMGTLGYCAPEYMRTG 129
L+ I Y P+Y+R G
Sbjct: 245 GLARDI----------------YKDPDYVRKG 260
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 13/71 (18%)
Query: 59 IVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMG-- 116
I+ L Y+H I+ R+ K S + NE+ K+ DF L+ H D + G
Sbjct: 134 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFYLA-------RHTDDEMTGYV 183
Query: 117 -TLGYCAPEYM 126
T Y APE M
Sbjct: 184 ATRWYRAPEIM 194
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 30.0 bits (66), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 29/65 (44%), Gaps = 4/65 (6%)
Query: 60 VHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMGTLG 119
+ AL YLH I+ R+ K ILF + KL DF +S D +GT
Sbjct: 145 LDALNYLH---DNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTR-XIQRRDXFIGTPY 200
Query: 120 YCAPE 124
+ APE
Sbjct: 201 WMAPE 205
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 30.0 bits (66), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Query: 77 RNFKTSCILFNEENVAKLFDFSL-SISIPEGETHITDTVMGTLGYCAPE 124
R+ K IL + ++ A L DF + S + E T + +TV GTL Y APE
Sbjct: 158 RDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNTV-GTLYYXAPE 205
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 30.0 bits (66), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 59/138 (42%), Gaps = 11/138 (7%)
Query: 3 SHNHILKLIGCCLET-PIPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIVH 61
SH ++L L+G CL + P++V +++G L + I L+ L++A
Sbjct: 148 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKG--- 204
Query: 62 ALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMGT---L 118
+ F + V R+ + +E+ K+ DF L+ + + E G +
Sbjct: 205 ----MKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPV 260
Query: 119 GYCAPEYMRTGVFNEKSN 136
+ A E ++T F KS+
Sbjct: 261 KWMALESLQTQKFTTKSD 278
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 30.0 bits (66), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 40/92 (43%), Gaps = 20/92 (21%)
Query: 39 APQPHFEPLL-LKHRLKIAMDIVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDF 97
AP+ ++ L L+H + + + + +L R + R+ IL +E+NV K+ DF
Sbjct: 186 APEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDF 242
Query: 98 SLSISIPEGETHITDTVMGTLGYCAPEYMRTG 129
L+ I Y P+Y+R G
Sbjct: 243 GLARDI----------------YKDPDYVRKG 258
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 30.0 bits (66), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 33/74 (44%), Gaps = 9/74 (12%)
Query: 55 IAMDIVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTV 114
+A+D VH L Y+H R+ K IL + +L DF + + T +
Sbjct: 173 MAIDSVHRLGYVH---------RDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLVA 223
Query: 115 MGTLGYCAPEYMRT 128
+GT Y +PE ++
Sbjct: 224 VGTPDYLSPEILQA 237
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 30.0 bits (66), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 7/78 (8%)
Query: 56 AMDIVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVM 115
A IV YLH +++R+ K +L +++ K+ DF + + +G T +
Sbjct: 148 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRV-KGRTW---XLC 200
Query: 116 GTLGYCAPEYMRTGVFNE 133
GT Y APE + + +N+
Sbjct: 201 GTPEYLAPEIILSKGYNK 218
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 30.0 bits (66), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 7/78 (8%)
Query: 56 AMDIVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVM 115
A IV YLH +++R+ K +L +++ K+ DF + + +G T +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRV-KGRTW---XLC 199
Query: 116 GTLGYCAPEYMRTGVFNE 133
GT Y APE + + +N+
Sbjct: 200 GTPEYLAPEIILSKGYNK 217
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 30.0 bits (66), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 7/78 (8%)
Query: 56 AMDIVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVM 115
A IV YLH +++R+ K +L +++ K+ DF + + +G T +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRV-KGRTW---XLC 199
Query: 116 GTLGYCAPEYMRTGVFNE 133
GT Y APE + + +N+
Sbjct: 200 GTPEYLAPEIILSKGYNK 217
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 30.0 bits (66), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 7/78 (8%)
Query: 56 AMDIVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVM 115
A IV YLH +++R+ K +L +++ K+ DF + + +G T +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRV-KGRTW---XLC 199
Query: 116 GTLGYCAPEYMRTGVFNE 133
GT Y APE + + +N+
Sbjct: 200 GTPEYLAPEIILSKGYNK 217
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 29.6 bits (65), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 40/92 (43%), Gaps = 20/92 (21%)
Query: 39 APQPHFEPLL-LKHRLKIAMDIVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDF 97
AP+ ++ L L+H + + + + +L R + R+ IL +E+NV K+ DF
Sbjct: 181 APEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDF 237
Query: 98 SLSISIPEGETHITDTVMGTLGYCAPEYMRTG 129
L+ I Y P+Y+R G
Sbjct: 238 GLARDI----------------YKDPDYVRKG 253
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 29.6 bits (65), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 7/78 (8%)
Query: 56 AMDIVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVM 115
A IV YLH +++R+ K +L +E+ ++ DF + + +G T +
Sbjct: 134 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDEQGYIQVTDFGFAKRV-KGRTW---XLC 186
Query: 116 GTLGYCAPEYMRTGVFNE 133
GT Y APE + + +N+
Sbjct: 187 GTPEYLAPEIILSKGYNK 204
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 29.6 bits (65), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 31/69 (44%), Gaps = 4/69 (5%)
Query: 58 DIVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTVMGT 117
IV YLH ++ R+ K + NE+ K+ DF L+ + E + + GT
Sbjct: 123 QIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKV-EYDGERKKVLCGT 178
Query: 118 LGYCAPEYM 126
Y APE +
Sbjct: 179 PNYIAPEVL 187
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 29.6 bits (65), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 48/106 (45%), Gaps = 10/106 (9%)
Query: 6 HILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIVHALAY 65
H+ +L+G CL + + L+ + + +G L D + + H + + ++ L + I + Y
Sbjct: 78 HVCRLLGICLTSTVQ-LITQLMPFGXLLDYV----REHKDNIGSQYLLNWCVQIAKGMNY 132
Query: 66 LHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLS--ISIPEGETH 109
L R +V R+ +L K+ DF L+ + E E H
Sbjct: 133 LE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH 175
>pdb|2YZR|A Chain A, Crystal Structure Of Pyridoxine Biosynthesis Protein From
Methanocaldococcus Jannaschii
pdb|2YZR|B Chain B, Crystal Structure Of Pyridoxine Biosynthesis Protein From
Methanocaldococcus Jannaschii
pdb|2YZR|C Chain C, Crystal Structure Of Pyridoxine Biosynthesis Protein From
Methanocaldococcus Jannaschii
Length = 330
Score = 29.6 bits (65), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 26/48 (54%)
Query: 180 FTEIVDHIVVEDVSSIEKEQQLHASAQVTFECIKDSPADRPSMVDVAK 227
F ++V H VV DV+++E+ Q + V ++ PAD + VA+
Sbjct: 12 FAKMVKHGVVMDVTNVEQAQIAEEAGAVAVMALERVPADIRAAGGVAR 59
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 29.6 bits (65), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 48/106 (45%), Gaps = 10/106 (9%)
Query: 6 HILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIVHALAY 65
H+ +L+G CL + + L+ + + +G L D + + H + + ++ L + I + Y
Sbjct: 78 HVCRLLGICLTSTVQ-LITQLMPFGCLLDYV----REHKDNIGSQYLLNWCVQIAKGMNY 132
Query: 66 LHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLS--ISIPEGETH 109
L R +V R+ +L K+ DF L+ + E E H
Sbjct: 133 LE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH 175
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 29.6 bits (65), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 48/106 (45%), Gaps = 10/106 (9%)
Query: 6 HILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIVHALAY 65
H+ +L+G CL + + L+ + + +G L D + + H + + ++ L + I + Y
Sbjct: 75 HVCRLLGICLTSTVQ-LITQLMPFGCLLDYV----REHKDNIGSQYLLNWCVQIAEGMNY 129
Query: 66 LHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLS--ISIPEGETH 109
L R +V R+ +L K+ DF L+ + E E H
Sbjct: 130 LE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH 172
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 29.6 bits (65), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 48/106 (45%), Gaps = 10/106 (9%)
Query: 6 HILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIVHALAY 65
H+ +L+G CL + + L+ + + +G L D + + H + + ++ L + I + Y
Sbjct: 81 HVCRLLGICLTSTVQ-LITQLMPFGCLLDYV----REHKDNIGSQYLLNWCVQIAKGMNY 135
Query: 66 LHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLS--ISIPEGETH 109
L R +V R+ +L K+ DF L+ + E E H
Sbjct: 136 LE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH 178
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 29.6 bits (65), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 48/106 (45%), Gaps = 10/106 (9%)
Query: 6 HILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIVHALAY 65
H+ +L+G CL + + L+ + + +G L D + + H + + ++ L + I + Y
Sbjct: 80 HVCRLLGICLTSTVQ-LITQLMPFGCLLDYV----REHKDNIGSQYLLNWCVQIAKGMNY 134
Query: 66 LHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLS--ISIPEGETH 109
L R +V R+ +L K+ DF L+ + E E H
Sbjct: 135 LE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH 177
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 29.6 bits (65), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 48/106 (45%), Gaps = 10/106 (9%)
Query: 6 HILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIVHALAY 65
H+ +L+G CL + + L+ + + +G L D + + H + + ++ L + I + Y
Sbjct: 81 HVCRLLGICLTSTVQ-LITQLMPFGCLLDYV----REHKDNIGSQYLLNWCVQIAKGMNY 135
Query: 66 LHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLS--ISIPEGETH 109
L R +V R+ +L K+ DF L+ + E E H
Sbjct: 136 LE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH 178
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 29.6 bits (65), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 48/106 (45%), Gaps = 10/106 (9%)
Query: 6 HILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIVHALAY 65
H+ +L+G CL + + L+ + + +G L D + + H + + ++ L + I + Y
Sbjct: 84 HVCRLLGICLTSTVQ-LITQLMPFGCLLDYV----REHKDNIGSQYLLNWCVQIAKGMNY 138
Query: 66 LHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLS--ISIPEGETH 109
L R +V R+ +L K+ DF L+ + E E H
Sbjct: 139 LE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH 181
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 29.6 bits (65), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 48/106 (45%), Gaps = 10/106 (9%)
Query: 6 HILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIVHALAY 65
H+ +L+G CL + + L+ + + +G L D + + H + + ++ L + I + Y
Sbjct: 81 HVCRLLGICLTSTVQ-LITQLMPFGCLLDYV----REHKDNIGSQYLLNWCVQIAKGMNY 135
Query: 66 LHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLS--ISIPEGETH 109
L R +V R+ +L K+ DF L+ + E E H
Sbjct: 136 LE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH 178
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 29.6 bits (65), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 48/106 (45%), Gaps = 10/106 (9%)
Query: 6 HILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIVHALAY 65
H+ +L+G CL + + L+ + + +G L D + + H + + ++ L + I + Y
Sbjct: 85 HVCRLLGICLTSTVQ-LITQLMPFGCLLDYV----REHKDNIGSQYLLNWCVQIAKGMNY 139
Query: 66 LHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLS--ISIPEGETH 109
L R +V R+ +L K+ DF L+ + E E H
Sbjct: 140 LE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH 182
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 29.6 bits (65), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 48/106 (45%), Gaps = 10/106 (9%)
Query: 6 HILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIVHALAY 65
H+ +L+G CL + + L+ + + +G L D + + H + + ++ L + I + Y
Sbjct: 103 HVCRLLGICLTSTVQ-LITQLMPFGCLLDYV----REHKDNIGSQYLLNWCVQIAKGMNY 157
Query: 66 LHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLS--ISIPEGETH 109
L R +V R+ +L K+ DF L+ + E E H
Sbjct: 158 LE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH 200
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 29.6 bits (65), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 48/106 (45%), Gaps = 10/106 (9%)
Query: 6 HILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIVHALAY 65
H+ +L+G CL + + L+ + + +G L D + + H + + ++ L + I + Y
Sbjct: 72 HVCRLLGICLTSTVQ-LITQLMPFGCLLDYV----REHKDNIGSQYLLNWCVQIAKGMNY 126
Query: 66 LHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLS--ISIPEGETH 109
L R +V R+ +L K+ DF L+ + E E H
Sbjct: 127 LE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH 169
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 29.6 bits (65), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 48/106 (45%), Gaps = 10/106 (9%)
Query: 6 HILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIVHALAY 65
H+ +L+G CL + + L+ + + +G L D + + H + + ++ L + I + Y
Sbjct: 78 HVCRLLGICLTSTVQ-LITQLMPFGCLLDYV----REHKDNIGSQYLLNWCVQIAKGMNY 132
Query: 66 LHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLS--ISIPEGETH 109
L R +V R+ +L K+ DF L+ + E E H
Sbjct: 133 LE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH 175
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 29.6 bits (65), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 48/106 (45%), Gaps = 10/106 (9%)
Query: 6 HILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIVHALAY 65
H+ +L+G CL + + L+ + + +G L D + + H + + ++ L + I + Y
Sbjct: 78 HVCRLLGICLTSTVQ-LITQLMPFGCLLDYV----REHKDNIGSQYLLNWCVQIAKGMNY 132
Query: 66 LHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLS--ISIPEGETH 109
L R +V R+ +L K+ DF L+ + E E H
Sbjct: 133 LE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH 175
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 29.6 bits (65), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 48/106 (45%), Gaps = 10/106 (9%)
Query: 6 HILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIVHALAY 65
H+ +L+G CL + + L+ + + +G L D + + H + + ++ L + I + Y
Sbjct: 85 HVCRLLGICLTSTVQ-LITQLMPFGCLLDYV----REHKDNIGSQYLLNWCVQIAKGMNY 139
Query: 66 LHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLS--ISIPEGETH 109
L R +V R+ +L K+ DF L+ + E E H
Sbjct: 140 LE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH 182
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 29.3 bits (64), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 48/106 (45%), Gaps = 10/106 (9%)
Query: 6 HILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIVHALAY 65
H+ +L+G CL + + L+ + + +G L D + + H + + ++ L + I + Y
Sbjct: 88 HVCRLLGICLTSTVQ-LITQLMPFGCLLDYV----REHKDNIGSQYLLNWCVQIAKGMNY 142
Query: 66 LHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLS--ISIPEGETH 109
L R +V R+ +L K+ DF L+ + E E H
Sbjct: 143 LE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH 185
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 29.3 bits (64), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 32/72 (44%), Gaps = 7/72 (9%)
Query: 55 IAMDIVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTV 114
+ ++ L Y+H I+ R+ K S + NE+ ++ DF L+ E T
Sbjct: 128 LVYQLLRGLKYIHSA---GIIHRDLKPSNVAVNEDCELRILDFGLARQADEEMT----GY 180
Query: 115 MGTLGYCAPEYM 126
+ T Y APE M
Sbjct: 181 VATRWYRAPEIM 192
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 29.3 bits (64), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 32/144 (22%), Positives = 59/144 (40%), Gaps = 15/144 (10%)
Query: 4 HNHILKLIGCCLETPIPILVFESVQYGTLWD------RILGAPQPHF----EPLLLKHRL 53
H +I+ L+G C +++ E YG L + R+L P F L + L
Sbjct: 109 HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVL-ETDPAFAIANSTLSTRDLL 167
Query: 54 KIAMDIVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHIT-D 112
+ + +A+L + + R+ +L +VAK+ DF L+ I +I
Sbjct: 168 HFSSQVAQGMAFLA---SKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKG 224
Query: 113 TVMGTLGYCAPEYMRTGVFNEKSN 136
+ + APE + V+ +S+
Sbjct: 225 NARLPVKWMAPESIFDCVYTVQSD 248
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 28.9 bits (63), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 48/106 (45%), Gaps = 10/106 (9%)
Query: 6 HILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIVHALAY 65
H+ +L+G CL + + L+ + + +G L D + + H + + ++ L + I + Y
Sbjct: 112 HVCRLLGICLTSTVQ-LITQLMPFGCLLDYV----REHKDNIGSQYLLNWCVQIAKGMNY 166
Query: 66 LHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLS--ISIPEGETH 109
L R +V R+ +L K+ DF L+ + E E H
Sbjct: 167 LE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH 209
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 28.9 bits (63), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 30/145 (20%), Positives = 57/145 (39%), Gaps = 15/145 (10%)
Query: 4 HNHILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHF-----------EPLLLKHR 52
H +I+ L+G C +++ E YG L + + P E L +
Sbjct: 109 HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDL 168
Query: 53 LKIAMDIVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHIT- 111
L + + +A+L + + R+ +L +VAK+ DF L+ I +I
Sbjct: 169 LHFSSQVAQGMAFLA---SKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVK 225
Query: 112 DTVMGTLGYCAPEYMRTGVFNEKSN 136
+ + APE + V+ +S+
Sbjct: 226 GNARLPVKWMAPESIFDCVYTVQSD 250
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 28.9 bits (63), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 36/80 (45%), Gaps = 6/80 (7%)
Query: 55 IAMDIVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLSISIPEGETHITDTV 114
I ++ AL Y H + ++ R+ K +L + K+ DF S+ P T+
Sbjct: 128 IMEELADALMYCH---GKKVIHRDIKPENLLLGLKGELKIADFGWSVHAPSLRR---KTM 181
Query: 115 MGTLGYCAPEYMRTGVFNEK 134
GTL Y PE + + NEK
Sbjct: 182 CGTLDYLPPEMIEGRMHNEK 201
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 28.5 bits (62), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 6/75 (8%)
Query: 51 HRLKIAMDIVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSL-SISIPEGETH 109
H + A +I L +L + I++R+ K ++ + E K+ DF + +I +G T
Sbjct: 122 HAVFYAAEIAIGLFFLQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVT- 177
Query: 110 ITDTVMGTLGYCAPE 124
T GT Y APE
Sbjct: 178 -TKXFCGTPDYIAPE 191
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 28.5 bits (62), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 6/75 (8%)
Query: 51 HRLKIAMDIVHALAYLHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSL-SISIPEGETH 109
H + A +I L +L + I++R+ K ++ + E K+ DF + +I +G T
Sbjct: 443 HAVFYAAEIAIGLFFLQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVT- 498
Query: 110 ITDTVMGTLGYCAPE 124
T GT Y APE
Sbjct: 499 -TKXFCGTPDYIAPE 512
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 28.1 bits (61), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 24/106 (22%), Positives = 47/106 (44%), Gaps = 10/106 (9%)
Query: 6 HILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIVHALAY 65
H+ +L+G CL + + L+ + + +G L D + + H + + ++ L + I + Y
Sbjct: 80 HVCRLLGICLTSTVQ-LIMQLMPFGCLLDYV----REHKDNIGSQYLLNWCVQIAKGMNY 134
Query: 66 LHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLS--ISIPEGETH 109
L R +V R+ +L K+ DF + + E E H
Sbjct: 135 LE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYH 177
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 28.1 bits (61), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 24/106 (22%), Positives = 47/106 (44%), Gaps = 10/106 (9%)
Query: 6 HILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIVHALAY 65
H+ +L+G CL + + L+ + + +G L D + + H + + ++ L + I + Y
Sbjct: 80 HVCRLLGICLTSTVQ-LIMQLMPFGCLLDYV----REHKDNIGSQYLLNWCVQIAKGMNY 134
Query: 66 LHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLS--ISIPEGETH 109
L R +V R+ +L K+ DF + + E E H
Sbjct: 135 LE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYH 177
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 28.1 bits (61), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 24/106 (22%), Positives = 47/106 (44%), Gaps = 10/106 (9%)
Query: 6 HILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIVHALAY 65
H+ +L+G CL + + L+ + + +G L D + + H + + ++ L + I + Y
Sbjct: 82 HVCRLLGICLTSTVQ-LIMQLMPFGCLLDYV----REHKDNIGSQYLLNWCVQIAKGMNY 136
Query: 66 LHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLS--ISIPEGETH 109
L R +V R+ +L K+ DF + + E E H
Sbjct: 137 LE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYH 179
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 27.3 bits (59), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 24/106 (22%), Positives = 47/106 (44%), Gaps = 10/106 (9%)
Query: 6 HILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIVHALAY 65
H+ +L+G CL + + L+ + + +G L D + + H + + ++ L + I + Y
Sbjct: 85 HVCRLLGICLTSTVQ-LITQLMPFGCLLDYV----REHKDNIGSQYLLNWCVQIAKGMNY 139
Query: 66 LHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLS--ISIPEGETH 109
L R +V R+ +L K+ DF + + E E H
Sbjct: 140 LE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYH 182
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 27.3 bits (59), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 24/106 (22%), Positives = 47/106 (44%), Gaps = 10/106 (9%)
Query: 6 HILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIVHALAY 65
H+ +L+G CL + + L+ + + +G L D + + H + + ++ L + I + Y
Sbjct: 78 HVCRLLGICLTSTVQ-LITQLMPFGCLLDYV----REHKDNIGSQYLLNWCVQIAKGMNY 132
Query: 66 LHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLS--ISIPEGETH 109
L R +V R+ +L K+ DF + + E E H
Sbjct: 133 LE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYH 175
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 27.3 bits (59), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 24/106 (22%), Positives = 47/106 (44%), Gaps = 10/106 (9%)
Query: 6 HILKLIGCCLETPIPILVFESVQYGTLWDRILGAPQPHFEPLLLKHRLKIAMDIVHALAY 65
H+ +L+G CL + + L+ + + +G L D + + H + + ++ L + I + Y
Sbjct: 80 HVCRLLGICLTSTVQ-LITQLMPFGCLLDYV----REHKDNIGSQYLLNWCVQIAKGMNY 134
Query: 66 LHFGFPRPIVFRNFKTSCILFNEENVAKLFDFSLS--ISIPEGETH 109
L R +V R+ +L K+ DF + + E E H
Sbjct: 135 LE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYH 177
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.324 0.139 0.430
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,878,285
Number of Sequences: 62578
Number of extensions: 268836
Number of successful extensions: 1360
Number of sequences better than 100.0: 499
Number of HSP's better than 100.0 without gapping: 121
Number of HSP's successfully gapped in prelim test: 378
Number of HSP's that attempted gapping in prelim test: 1110
Number of HSP's gapped (non-prelim): 537
length of query: 239
length of database: 14,973,337
effective HSP length: 96
effective length of query: 143
effective length of database: 8,965,849
effective search space: 1282116407
effective search space used: 1282116407
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 50 (23.9 bits)