BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 044156
(288 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LQ55|DRP2B_ARATH Dynamin-2B OS=Arabidopsis thaliana GN=DRP2B PE=1 SV=2
Length = 920
Score = 471 bits (1212), Expect = e-132, Method: Compositional matrix adjust.
Identities = 234/286 (81%), Positives = 254/286 (88%), Gaps = 8/286 (2%)
Query: 1 ALLLNQGSPKTADIPWVALIGQSVSIATTQSG-SEISLETAWTAESESLKSILIGAPQSQ 59
ALL NQG PKT DIPWVALIGQSVSIA+ QSG SE SLETAW AESESLKSIL GAPQS+
Sbjct: 221 ALLSNQGPPKTTDIPWVALIGQSVSIASAQSGGSENSLETAWRAESESLKSILTGAPQSK 280
Query: 60 LGRIALADDLAQLIRKRMKVRVPNLLSGLQGKSQIVQDELVRLGEQMVQSVEGTRSLSLE 119
LGRIAL D LA IR RMK+R+PN+L+GLQGKSQIVQDEL RLGEQ+V S EGTR+++LE
Sbjct: 281 LGRIALVDTLASQIRSRMKLRLPNILTGLQGKSQIVQDELARLGEQLVSSAEGTRAIALE 340
Query: 120 LCREFEDKFLQLITTGEGSGWKIVASFEGNFPNRIKQLPLDRRFDINNVQRIVLEADGYQ 179
LCREFEDKFL + GEGSGWK+VASFEGNFPNRIK+LPLDR FD+NNV+RIVLEADGYQ
Sbjct: 341 LCREFEDKFLLHLAGGEGSGWKVVASFEGNFPNRIKKLPLDRHFDLNNVKRIVLEADGYQ 400
Query: 180 PYLISPEKGLRSLIKGVLELAKEPSRLSVDEVIEPLKHVHRVLVGMVSAAANATPGLGRY 239
PYLISPEKGLRSLIK VLELAK+P+RL VDE VHRVLV +VSA+ANATPGLGRY
Sbjct: 401 PYLISPEKGLRSLIKTVLELAKDPARLCVDE-------VHRVLVDIVSASANATPGLGRY 453
Query: 240 PLFKREVVAIASAALDGFKNEARKMVVALVDMERAFVPPQHFIRLV 285
P FKREVVAIASAALDGFKNEA+KMVVALVDMERAFVPPQHFIRLV
Sbjct: 454 PPFKREVVAIASAALDGFKNEAKKMVVALVDMERAFVPPQHFIRLV 499
>sp|Q9SE83|DRP2A_ARATH Dynamin-2A OS=Arabidopsis thaliana GN=DRP2A PE=1 SV=2
Length = 914
Score = 469 bits (1207), Expect = e-132, Method: Compositional matrix adjust.
Identities = 233/286 (81%), Positives = 254/286 (88%), Gaps = 8/286 (2%)
Query: 1 ALLLNQGSPKTADIPWVALIGQSVSIATTQSGS-EISLETAWTAESESLKSILIGAPQSQ 59
ALL NQG PKT DIPWVA+IGQSVSIA+ QSGS E SLETAW AESESLKSIL GAPQS+
Sbjct: 221 ALLSNQGPPKTTDIPWVAVIGQSVSIASAQSGSGENSLETAWRAESESLKSILTGAPQSK 280
Query: 60 LGRIALADDLAQLIRKRMKVRVPNLLSGLQGKSQIVQDELVRLGEQMVQSVEGTRSLSLE 119
LGRIAL D LA IR RMK+R+P++LSGLQGKSQIVQDEL RLGEQ+V S EGTR+++LE
Sbjct: 281 LGRIALVDTLASQIRSRMKLRLPSVLSGLQGKSQIVQDELARLGEQLVNSAEGTRAIALE 340
Query: 120 LCREFEDKFLQLITTGEGSGWKIVASFEGNFPNRIKQLPLDRRFDINNVQRIVLEADGYQ 179
LCREFEDKFL + GEGSGWK+VASFEGNFPNRIKQLPLDR FD+NNV+R+VLEADGYQ
Sbjct: 341 LCREFEDKFLLHLAGGEGSGWKVVASFEGNFPNRIKQLPLDRHFDLNNVKRVVLEADGYQ 400
Query: 180 PYLISPEKGLRSLIKGVLELAKEPSRLSVDEVIEPLKHVHRVLVGMVSAAANATPGLGRY 239
PYLISPEKGLRSLIK VLELAK+P+RL VDE VHRVLV +VSA+ANATPGLGRY
Sbjct: 401 PYLISPEKGLRSLIKIVLELAKDPARLCVDE-------VHRVLVDIVSASANATPGLGRY 453
Query: 240 PLFKREVVAIASAALDGFKNEARKMVVALVDMERAFVPPQHFIRLV 285
P FKREVVAIASAALDGFKNEA+KMVVALVDMERAFVPPQHFIRLV
Sbjct: 454 PPFKREVVAIASAALDGFKNEAKKMVVALVDMERAFVPPQHFIRLV 499
>sp|Q9FNX5|DRP1E_ARATH Dynamin-related protein 1E OS=Arabidopsis thaliana GN=DRP1E PE=1
SV=1
Length = 624
Score = 144 bits (363), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 88/273 (32%), Positives = 145/273 (53%), Gaps = 12/273 (4%)
Query: 15 PWVALIGQSVSIATTQSGSEISLETAWTAESESLK-SILIGAPQSQLGRIALADDLAQLI 73
PWV ++ +S + + A E E S G S++G LA L++ +
Sbjct: 242 PWVGIVNRS----QADINKNVDMMLARRKEREYFDTSPDYGHLASKMGSEYLAKLLSKHL 297
Query: 74 RKRMKVRVPNLLSGLQGKSQIVQDELVRLGEQMVQSVEGTRSLSLELCREFEDKFLQLIT 133
++ R+P++LS + + ++ EL R+G + LE+CR F+ F + +
Sbjct: 298 ESVIRTRIPSILSLINKSIEELERELDRMGRPVAVDAGAQLYTILEMCRAFDKIFKEHLD 357
Query: 134 TGEGSGWKIVASFEGNFPNRIKQLPLDRRFDINNVQRIVLEADGYQPYLISPEKGLRSLI 193
G G +I F+ P +K+LP DR + +V++IV EADGYQP+LI+PE+G R LI
Sbjct: 358 GGRPGGDRIYGVFDNQLPAALKKLPFDRHLSLQSVKKIVSEADGYQPHLIAPEQGYRRLI 417
Query: 194 KGVLELAKEPSRLSVDEVIEPLKHVHRVLVGMVSAAANATPGLGRYPLFKREVVAIASAA 253
+G L + P+ SVD VH VL +V + + T L R+P + E+ A A+++
Sbjct: 418 EGALGYFRGPAEASVDA-------VHYVLKELVRKSISETEELKRFPSLQVELAAAANSS 470
Query: 254 LDGFKNEARKMVVALVDMERAFVPPQHFIRLVQ 286
L+ F+ E++K V+ LVDME A++ + F +L Q
Sbjct: 471 LEKFREESKKSVIRLVDMESAYLTAEFFRKLPQ 503
>sp|Q8S3C9|DRP1D_ARATH Dynamin-related protein 1D OS=Arabidopsis thaliana GN=DRP1D PE=2
SV=2
Length = 612
Score = 140 bits (353), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 91/285 (31%), Positives = 147/285 (51%), Gaps = 12/285 (4%)
Query: 1 ALLLNQGSPKTADIPWVALIGQSVSIATTQSGSEISLETAWTAESESLK-SILIGAPQSQ 59
AL + G PWV ++ +S + + A E E + S G ++
Sbjct: 223 ALDVINGRSYKLKYPWVGIVNRS----QADINKNVDMMVARRKEREYFETSPDYGHLATR 278
Query: 60 LGRIALADDLAQLIRKRMKVRVPNLLSGLQGKSQIVQDELVRLGEQMVQSVEGTRSLSLE 119
+G LA L++L+ ++ R+P++LS + + ++ EL +LG + L
Sbjct: 279 MGSEYLAKLLSKLLESVIRSRIPSILSLINNNIEELERELDQLGRPIAIDAGAQLYTILG 338
Query: 120 LCREFEDKFLQLITTGEGSGWKIVASFEGNFPNRIKQLPLDRRFDINNVQRIVLEADGYQ 179
+CR FE F + + G G +I F+ N P IK+LP DR + +V+RIV E+DGYQ
Sbjct: 339 MCRAFEKIFKEHLDGGRPGGARIYGIFDYNLPTAIKKLPFDRHLSLQSVKRIVSESDGYQ 398
Query: 180 PYLISPEKGLRSLIKGVLELAKEPSRLSVDEVIEPLKHVHRVLVGMVSAAANATPGLGRY 239
P+LI+PE G R LI+G L + P+ SV+ +H +L +V A T L R+
Sbjct: 399 PHLIAPELGYRRLIEGSLNHFRGPAEASVNA-------IHLILKELVRKAIAETEELKRF 451
Query: 240 PLFKREVVAIASAALDGFKNEARKMVVALVDMERAFVPPQHFIRL 284
P + E+VA A+++LD F+ E+ K V+ LVDME +++ F +L
Sbjct: 452 PSLQIELVAAANSSLDKFREESMKSVLRLVDMESSYLTVDFFRKL 496
>sp|Q8LF21|DRP1C_ARATH Dynamin-related protein 1C OS=Arabidopsis thaliana GN=DRP1C PE=1
SV=2
Length = 614
Score = 140 bits (352), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 86/271 (31%), Positives = 140/271 (51%), Gaps = 12/271 (4%)
Query: 15 PWVALIGQSVSIATTQSGSEISLETAWTAESESLK-SILIGAPQSQLGRIALADDLAQLI 73
PWV ++ +S + + A E E + S G S++G LA L+Q +
Sbjct: 237 PWVGIVNRS----QADINKRVDMIAARRKEQEYFETSPEYGHLASRMGSEYLAKLLSQHL 292
Query: 74 RKRMKVRVPNLLSGLQGKSQIVQDELVRLGEQMVQSVEGTRSLSLELCREFEDKFLQLIT 133
++ ++P++++ + + EL R+G + LELCR F+ F + +
Sbjct: 293 ETVIRQKIPSIVALINKSIDEINAELDRIGRPIAVDSGAQLYTILELCRAFDRVFKEHLD 352
Query: 134 TGEGSGWKIVASFEGNFPNRIKQLPLDRRFDINNVQRIVLEADGYQPYLISPEKGLRSLI 193
G G +I F+ P +K+LP DR NVQ++V EADGYQP+LI+PE+G R LI
Sbjct: 353 GGRPGGDRIYGVFDHQLPAALKKLPFDRHLSTKNVQKVVSEADGYQPHLIAPEQGYRRLI 412
Query: 194 KGVLELAKEPSRLSVDEVIEPLKHVHRVLVGMVSAAANATPGLGRYPLFKREVVAIASAA 253
G + K P+ +VD VH VL +V + + T L R+P ++ A A+ A
Sbjct: 413 DGSISYFKGPAEATVDA-------VHFVLKELVRKSISETEELKRFPTLASDIAAAANEA 465
Query: 254 LDGFKNEARKMVVALVDMERAFVPPQHFIRL 284
L+ F++E+RK V+ LVDME +++ + F +L
Sbjct: 466 LERFRDESRKTVLRLVDMESSYLTVEFFRKL 496
>sp|Q84XF3|DRP1B_ARATH Dynamin-related protein 1B OS=Arabidopsis thaliana GN=DRP1B PE=2
SV=1
Length = 610
Score = 130 bits (328), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 139/277 (50%), Gaps = 20/277 (7%)
Query: 15 PWVALIGQSVSIATTQSGSEISLETAWTAESESLKSILIGAPQ-----SQLGRIALADDL 69
PWV ++ +S ++I+ A + +P+ ++G L L
Sbjct: 236 PWVGVV--------NRSQADINKSVDMIAARRRERDYFQTSPEYRHLTERMGSEYLGKML 287
Query: 70 AQLIRKRMKVRVPNLLSGLQGKSQIVQDELVRLGEQMVQSVEGTRSLSLELCREFEDKFL 129
++ + +K R+P L S + ++ EL RLG+ + G + +E+CR F+ F
Sbjct: 288 SKHLEVVIKSRIPGLQSLITKTISELETELSRLGKPVAADAGGKLYMIMEICRAFDQTFK 347
Query: 130 QLITTGEGSGWKIVASFEGNFPNRIKQLPLDRRFDINNVQRIVLEADGYQPYLISPEKGL 189
+ + G KI + F+ FP IK+L D+ ++NV++++ EADGYQP+LI+PE+G
Sbjct: 348 EHLDGTRSGGEKINSVFDNQFPAAIKRLQFDKHLSMDNVRKLITEADGYQPHLIAPEQGY 407
Query: 190 RSLIKGVLELAKEPSRLSVDEVIEPLKHVHRVLVGMVSAAANATPGLGRYPLFKREVVAI 249
R LI+ L + P+ +VD VH +L ++ + T L +YP + EV
Sbjct: 408 RRLIESCLVSIRGPAEAAVDA-------VHSILKDLIHKSMGETSELKQYPTLRVEVSGA 460
Query: 250 ASAALDGFKNEARKMVVALVDMERAFVPPQHFIRLVQ 286
A +LD ++E+RK + LVDME ++ + F +L Q
Sbjct: 461 AVDSLDRMRDESRKATLLLVDMESGYLTVEFFRKLPQ 497
>sp|P42697|DRP1A_ARATH Dynamin-related protein 1A OS=Arabidopsis thaliana GN=DRP1A PE=1
SV=3
Length = 610
Score = 120 bits (301), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 136/273 (49%), Gaps = 12/273 (4%)
Query: 15 PWVALIGQSVSIATTQSGSEISLETAWTAESESLKSIL-IGAPQSQLGRIALADDLAQLI 73
PWV ++ +S + + A E E + +++G LA L++ +
Sbjct: 236 PWVGVVNRS----QADINKNVDMIAARKREREYFSNTTEYRHLANKMGSEHLAKMLSKHL 291
Query: 74 RKRMKVRVPNLLSGLQGKSQIVQDELVRLGEQMVQSVEGTRSLSLELCREFEDKFLQLIT 133
+ +K R+P + S + ++ EL RLG+ + G +E+CR F+ F + +
Sbjct: 292 ERVIKSRIPGIQSLINKTVLELETELSRLGKPIAADAGGKLYSIMEICRLFDQIFKEHLD 351
Query: 134 TGEGSGWKIVASFEGNFPNRIKQLPLDRRFDINNVQRIVLEADGYQPYLISPEKGLRSLI 193
G K+ F+ P +K+L D++ ++N++++V EADGYQP+LI+PE+G R LI
Sbjct: 352 GVRAGGEKVYNVFDNQLPAALKRLQFDKQLAMDNIRKLVTEADGYQPHLIAPEQGYRRLI 411
Query: 194 KGVLELAKEPSRLSVDEVIEPLKHVHRVLVGMVSAAANATPGLGRYPLFKREVVAIASAA 253
+ + + P+ SVD VH +L +V + N T L +YP + EV A +
Sbjct: 412 ESSIVSIRGPAEASVDT-------VHAILKDLVHKSVNETVELKQYPALRVEVTNAAIES 464
Query: 254 LDGFKNEARKMVVALVDMERAFVPPQHFIRLVQ 286
LD + ++K + LVDME +++ F +L Q
Sbjct: 465 LDKMREGSKKATLQLVDMECSYLTVDFFRKLPQ 497
>sp|Q39828|SDL5A_SOYBN Dynamin-related protein 5A OS=Glycine max PE=2 SV=1
Length = 610
Score = 116 bits (291), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 137/278 (49%), Gaps = 20/278 (7%)
Query: 14 IPWVALIGQSVSIATTQSGSEISLETAWTAESESLKSILIGAPQ-----SQLGRIALADD 68
PW+ ++ +S + + A E E S P+ +++G LA
Sbjct: 235 FPWIGVVNRS----QQDINKNVDMIAARRREREYFNS----TPEYKHLANRMGSEHLAKM 286
Query: 69 LAQLIRKRMKVRVPNLLSGLQGKSQIVQDELVRLGEQMVQSVEGTRSLSLELCREFEDKF 128
L++ + +K ++P + S + ++ EL RLG+ + G +E+CR F+ F
Sbjct: 287 LSKHLETVIKSKIPGIQSLINKTIAELEAELTRLGKPVAADAGGKLYAIMEICRSFDQIF 346
Query: 129 LQLITTGEGSGWKIVASFEGNFPNRIKQLPLDRRFDINNVQRIVLEADGYQPYLISPEKG 188
+ G KI F+ P +K+L D++ + N+++++ EADGYQP+LI+PE+G
Sbjct: 347 KDHLDGVRPGGDKIYNVFDNQLPAALKRLQFDKQLSMENIRKLITEADGYQPHLIAPEQG 406
Query: 189 LRSLIKGVLELAKEPSRLSVDEVIEPLKHVHRVLVGMVSAAANATPGLGRYPLFKREVVA 248
R LI+ L + P+ +VD VH +L +V A + T L +YP + EV A
Sbjct: 407 YRRLIESSLITIRGPAEAAVDA-------VHSLLKDLVHKAISETLDLKQYPGLRVEVGA 459
Query: 249 IASAALDGFKNEARKMVVALVDMERAFVPPQHFIRLVQ 286
A +L+ ++E+++ + LVDME ++ F +L Q
Sbjct: 460 AAVDSLERMRDESKRATLQLVDMECGYLTVDFFRKLPQ 497
>sp|Q39821|SDLCA_SOYBN Dynamin-related protein 12A OS=Glycine max PE=1 SV=1
Length = 610
Score = 115 bits (287), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 137/278 (49%), Gaps = 20/278 (7%)
Query: 14 IPWVALIGQSVSIATTQSGSEISLETAWTAESESLKSILIGAPQ-----SQLGRIALADD 68
PW+ ++ +S + + A E E S P+ +++G LA
Sbjct: 235 FPWIGVVNRS----QQDINKNVDMIAARRREREYFNS----TPEYKHLANRMGSEHLAKM 286
Query: 69 LAQLIRKRMKVRVPNLLSGLQGKSQIVQDELVRLGEQMVQSVEGTRSLSLELCREFEDKF 128
L++ + +K ++P + S + ++ EL RLG+ + G +E+CR F+ F
Sbjct: 287 LSKHLETVIKSKIPGIQSLINKTIAELEAELTRLGKPVAADAGGKLYAIMEICRSFDQIF 346
Query: 129 LQLITTGEGSGWKIVASFEGNFPNRIKQLPLDRRFDINNVQRIVLEADGYQPYLISPEKG 188
+ G KI F+ P +K+L D++ + N+++++ EADGYQP+LI+PE+G
Sbjct: 347 KDHLDGVRPGGDKIYNVFDNQLPAALKRLQFDKQLSMENIRKLITEADGYQPHLIAPEQG 406
Query: 189 LRSLIKGVLELAKEPSRLSVDEVIEPLKHVHRVLVGMVSAAANATPGLGRYPLFKREVVA 248
R LI+ L + P+ +VD VH +L +V A + T L +YP + EV A
Sbjct: 407 YRRLIESSLITIRGPAESAVDA-------VHSLLKDLVHKAMSETLDLKQYPGLRVEVGA 459
Query: 249 IASAALDGFKNEARKMVVALVDMERAFVPPQHFIRLVQ 286
+ +L+ ++E+++ + LVDME ++ F +L Q
Sbjct: 460 ASVDSLERMRDESKRATLQLVDMECGYLTVDFFRKLPQ 497
>sp|P54861|DNM1_YEAST Dynamin-related protein DNM1 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=DNM1 PE=1 SV=1
Length = 757
Score = 61.6 bits (148), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 97/232 (41%), Gaps = 19/232 (8%)
Query: 58 SQLGRIALADDLAQLIRKRMKVRVPNLLSGLQGKSQIVQDELVRLGEQMVQSVEGTRSLS 117
++ G LA L Q + ++ ++P++ + L + EL R G + E SL
Sbjct: 309 TKCGTRYLAKLLNQTLLSHIRDKLPDIKTKLNTLISQTEQELARYGGVGATTNESRASLV 368
Query: 118 LELCREFEDKFLQLI--------TTGEGSGWKIVASFEGNFPNRIKQLPLDRRFDINNVQ 169
L+L +F F+ I T G +I + F N +K + + +V+
Sbjct: 369 LQLMNKFSTNFISSIDGTSSDINTKELCGGARIYYIYNNVFGNSLKSIDPTSNLSVLDVR 428
Query: 170 RIVLEADGYQPYLISPEKGLRSLIKGVLELAKEPSRLSVDEVIEPL-KHVHRVLVGMVSA 228
+ + G +P L PE L+K ++L EPS+ V+ V E L K H+
Sbjct: 429 TAIRNSTGPRPTLFVPELAFDLLVKPQIKLLLEPSQRCVELVYEELMKICHKC------- 481
Query: 229 AANATPGLGRYPLFKREVVAIASAALDGFKNEARKMVVALVDMERAFVPPQH 280
+ L RYP K ++ + S L R V +L+D+ RA++ H
Sbjct: 482 ---GSAELARYPKLKSMLIEVISELLRERLQPTRSYVESLIDIHRAYINTNH 530
>sp|P39055|DYN1_CAEEL Dynamin OS=Caenorhabditis elegans GN=dyn-1 PE=1 SV=3
Length = 830
Score = 49.3 bits (116), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/232 (21%), Positives = 95/232 (40%), Gaps = 19/232 (8%)
Query: 58 SQLGRIALADDLAQLIRKRMKVRVPNLLSGLQGKSQIVQDELVRL--------GEQMVQS 109
+LG L L Q + ++ +P L LQ K ++ ++ G +
Sbjct: 272 DRLGTSYLQHTLNQQLTNHIRDTLPTLRDSLQKKMFAMEKDVAEYKNYQPNDPGRKTKAL 331
Query: 110 VEGTRSLSLELCREFEDKFLQLITTGEGSGW-KIVASFEGNFPNRIKQLPLDRRFDINNV 168
++ + ++ R E +L++T E SG +I F FP I ++ +D + +
Sbjct: 332 LQMVTQFNADIERSIEGSSAKLVSTNELSGGARINRLFHERFPFEIVKMEIDEKEMRKEI 391
Query: 169 QRIVLEADGYQPYLISPEKGLRSLIKGVLELAKEPSRLSVDEVIEPLKHVHRVLVGMVSA 228
Q + G + L +P+ ++ K + KEPS VD V+ L +V R
Sbjct: 392 QYAIRNIHGIRVGLFTPDMAFEAIAKKQITRLKEPSLKCVDLVVNELANVIR-------- 443
Query: 229 AANATPGLGRYPLFKREVVAIASAALDGFKNEARKMVVALVDMERAFVPPQH 280
+ RYP + E+ I + + + A++ + +VD E A++ H
Sbjct: 444 --QCADTMARYPRLRDELERIVVSHMREREQIAKQQIGLIVDYELAYMNTNH 493
>sp|Q9U1M9|DYNB_DICDI Dynamin-B OS=Dictyostelium discoideum GN=dymB PE=3 SV=1
Length = 920
Score = 44.7 bits (104), Expect = 0.001, Method: Composition-based stats.
Identities = 55/249 (22%), Positives = 109/249 (43%), Gaps = 44/249 (17%)
Query: 58 SQLGRIALADDLAQLIRKRMKVRVPNLLSGLQGKSQIVQDELVRLGEQM-VQSVEGTRSL 116
+QLG LA +++ K ++ P++ + ++ + + +L + GE + ++S E +R L
Sbjct: 424 NQLGTKYLAQKCNKILTKHIRDTFPSVKNQIRQLIKKYESDLEKYGEPIPLRSAEKSRLL 483
Query: 117 SLELCREFEDKFLQLITTGEGSGWKIVASFEGNFPNRIKQLPLDRRFDINNVQRIVLEAD 176
L++ EF K+ + +G+ +++ + E N RI+ + + F D
Sbjct: 484 -LDILNEFSRKYRADL---DGTNEELILN-EFNGGARIRYI-FSKAFQSTTAAAATTSTD 537
Query: 177 ---GYQPY------------------LISPEKGLRSLIKGVLELAKEP----SRLSVDEV 211
G +P+ + P+K SLI+ LE +EP S + +DE+
Sbjct: 538 NSGGGEPFGWLSDQQLKIALRNSGSTMFIPQKIFDSLIRKQLERVREPLIQTSEIILDEL 597
Query: 212 IEPLKHVHRVLVGMVSAAANATPGLGRYPLFKREVVAIASAALDGFKNEARKMVVALVDM 271
I L A+ + L R+P+ K +V +++ AL E + + +VD
Sbjct: 598 IRILTQ------------ADYSHVLSRFPILKERIVEVSNNALRKLVKECNQSISQMVDA 645
Query: 272 ERAFVPPQH 280
E +F+ H
Sbjct: 646 EMSFINTNH 654
>sp|P39054|DYN2_MOUSE Dynamin-2 OS=Mus musculus GN=Dnm2 PE=1 SV=2
Length = 870
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/233 (19%), Positives = 90/233 (38%), Gaps = 24/233 (10%)
Query: 59 QLGRIALADDLAQLIRKRMKVRVPNLLSGLQGK-----------SQIVQDELVRLGEQMV 107
++G L L Q + ++ +P L S LQ + D+ R + ++
Sbjct: 271 RMGTPHLQKTLNQQLTNHIRESLPTLRSKLQSQLLSLEKEVEEYKNFRPDDPTRKTKALL 330
Query: 108 QSVEGTRSLSLELCREFEDKFLQLITTGEGSGWKIVASFEGNFPNRIKQLPLDRRFDINN 167
Q V+ ++ + E Q+ T G +I F FP + ++ D +
Sbjct: 331 QMVQ---QFGVDFEKRIEGSGDQVDTLELSGGARINRIFHERFPFELVKMEFDEKDLRRE 387
Query: 168 VQRIVLEADGYQPYLISPEKGLRSLIKGVLELAKEPSRLSVDEVIEPLKHVHRVLVGMVS 227
+ + G + L +P+ +++K + KEP VD VI+ L +S
Sbjct: 388 ISYAIKNIHGVRTGLFTPDLAFEAIVKKQVVKLKEPCLKCVDLVIQEL----------IS 437
Query: 228 AAANATPGLGRYPLFKREVVAIASAALDGFKNEARKMVVALVDMERAFVPPQH 280
T L YP + E I + + + + ++ L+D+E++++ H
Sbjct: 438 TVRQCTSKLSSYPRLREETERIVTTYIREREGRTKDQILLLIDIEQSYINTNH 490
>sp|P39052|DYN2_RAT Dynamin-2 OS=Rattus norvegicus GN=Dnm2 PE=1 SV=1
Length = 870
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/233 (19%), Positives = 90/233 (38%), Gaps = 24/233 (10%)
Query: 59 QLGRIALADDLAQLIRKRMKVRVPNLLSGLQGK-----------SQIVQDELVRLGEQMV 107
++G L L Q + ++ +P L S LQ + D+ R + ++
Sbjct: 271 RMGTPHLQKTLNQQLTNHIRESLPTLRSKLQSQLLSLEKEVEEYKNFRPDDPTRKTKALL 330
Query: 108 QSVEGTRSLSLELCREFEDKFLQLITTGEGSGWKIVASFEGNFPNRIKQLPLDRRFDINN 167
Q V+ ++ + E Q+ T G +I F FP + ++ D +
Sbjct: 331 QMVQ---QFGVDFEKRIEGSGDQVDTLELSGGARINRIFHERFPFELVKMEFDEKDLRRE 387
Query: 168 VQRIVLEADGYQPYLISPEKGLRSLIKGVLELAKEPSRLSVDEVIEPLKHVHRVLVGMVS 227
+ + G + L +P+ +++K + KEP VD VI+ L +S
Sbjct: 388 ISYAIKNIHGVRTGLFTPDLAFEAIVKKQVVKLKEPCLKCVDLVIQEL----------IS 437
Query: 228 AAANATPGLGRYPLFKREVVAIASAALDGFKNEARKMVVALVDMERAFVPPQH 280
T L YP + E I + + + + ++ L+D+E++++ H
Sbjct: 438 TVRQCTSKLSSYPRLREETERIVTTYIREREGRTKDQILLLIDIEQSYINTNH 490
>sp|Q05193|DYN1_HUMAN Dynamin-1 OS=Homo sapiens GN=DNM1 PE=1 SV=2
Length = 864
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/176 (20%), Positives = 73/176 (41%), Gaps = 16/176 (9%)
Query: 105 QMVQSVEGTRSLSLELCREFEDKFLQLITTGEGSGWKIVASFEGNFPNRIKQLPLDRRFD 164
QMVQ +++ + E Q+ T G +I F FP + ++ D +
Sbjct: 331 QMVQQ------FAVDFEKRIEGSGDQIDTYELSGGARINRIFHERFPFELVKMEFDEKEL 384
Query: 165 INNVQRIVLEADGYQPYLISPEKGLRSLIKGVLELAKEPSRLSVDEVIEPLKHVHRVLVG 224
+ + G + L +P+ +++K ++ +EP LK V V+
Sbjct: 385 RREISYAIKNIHGIRTGLFTPDMAFETIVKKQVKKIREPC----------LKCVDMVISE 434
Query: 225 MVSAAANATPGLGRYPLFKREVVAIASAALDGFKNEARKMVVALVDMERAFVPPQH 280
++S T L +YP + E+ I + + + ++ V+ L+D+E A++ H
Sbjct: 435 LISTVRQCTKKLQQYPRLREEMERIVTTHIREREGRTKEQVMLLIDIELAYMNTNH 490
>sp|P39053|DYN1_MOUSE Dynamin-1 OS=Mus musculus GN=Dnm1 PE=1 SV=2
Length = 867
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/184 (19%), Positives = 78/184 (42%), Gaps = 13/184 (7%)
Query: 97 DELVRLGEQMVQSVEGTRSLSLELCREFEDKFLQLITTGEGSGWKIVASFEGNFPNRIKQ 156
D+ R + ++Q V+ +++ + E Q+ T G +I F FP + +
Sbjct: 320 DDPARKTKALLQMVQ---QFAVDFEKRIEGSGDQIDTYELSGGARINRIFHERFPFELVK 376
Query: 157 LPLDRRFDINNVQRIVLEADGYQPYLISPEKGLRSLIKGVLELAKEPSRLSVDEVIEPLK 216
+ D + + + G + L +P+ +++K ++ +EP LK
Sbjct: 377 MEFDEKELRREISYAIKNIHGIRTGLFTPDMAFETIVKKQVKKIREPC----------LK 426
Query: 217 HVHRVLVGMVSAAANATPGLGRYPLFKREVVAIASAALDGFKNEARKMVVALVDMERAFV 276
V V+ ++S T L +YP + E+ I + + + ++ V+ L+D+E A++
Sbjct: 427 CVDMVISELISTVRQCTKKLQQYPRLREEMERIVTTHIREREGRTKEQVMLLIDIELAYM 486
Query: 277 PPQH 280
H
Sbjct: 487 NTNH 490
>sp|P21576|VPS1_YEAST Vacuolar protein sorting-associated protein 1 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=VPS1 PE=1
SV=2
Length = 704
Score = 42.7 bits (99), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/237 (21%), Positives = 100/237 (42%), Gaps = 37/237 (15%)
Query: 61 GRIALADDLAQLIRKRMKVRVPNLLSGLQGKSQIVQDELVRLGEQMVQSVEGTRSLSLEL 120
G LA L ++ ++ +P + + ++ + Q+EL+ LG + + S S+ L +
Sbjct: 315 GTPYLAKKLNSILLHHIRQTLPEIKAKIEATLKKYQNELINLGPETMDSAS---SVVLSM 371
Query: 121 CREFEDKFLQLITTGEGS---------GWKIVASFEGNFPNRIKQL-PLDRRFDINNVQR 170
+F +++ ++ GE G +I F F N + L P D+ D ++++
Sbjct: 372 ITDFSNEYAGILD-GEAKELSSQELSGGARISYVFHETFKNGVDSLDPFDQIKD-SDIRT 429
Query: 171 IVLEADGYQPYLISPEKGLRSLIKGVLELAKEPS----RLSVDEVIEPLKHVHRVLVGMV 226
I+ + G P L + L+K + +EPS L DE++ LK +
Sbjct: 430 IMYNSSGSAPSLFVGTEAFEVLVKQQIRRFEEPSLRLVTLVFDELVRMLKQII------- 482
Query: 227 SAAANATPGLGRYPLFKREVVAIASAALDGFKNE---ARKMVVALVDMERAFVPPQH 280
+ P RYP + AI++ + K+ + VV ++ E+ ++ H
Sbjct: 483 -----SQPKYSRYPALRE---AISNQFIQFLKDATIPTNEFVVDIIKAEQTYINTAH 531
>sp|P27619|DYN_DROME Dynamin OS=Drosophila melanogaster GN=shi PE=1 SV=2
Length = 877
Score = 42.7 bits (99), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 102/228 (44%), Gaps = 29/228 (12%)
Query: 69 LAQLIRKRMKVRVPNLLSGLQGKSQIVQDELVRLGEQMVQSVEGTRSLS----LELCREF 124
L +++ +++ + + L GL+ K Q L + E+ G S+ L++ ++
Sbjct: 272 LQRVLNQQLTNHIRDTLPGLRDKLQKQMLTLEKEVEEFKHFQPGDASIKTKAMLQMIQQL 331
Query: 125 EDKFLQLITTGEGSGWKIVASFEGNFPNRIKQLPLDR-RFDI-----------NNVQRIV 172
+ F + I EGSG +V + E + +I ++ +R RF+I + +
Sbjct: 332 QSDFERTI---EGSGSALVNTNELSGGAKINRIFHERLRFEIVKMACDEKELRREISFAI 388
Query: 173 LEADGYQPYLISPEKGLRSLIKGVLELAKEPSRLSVDEVIEPLKHVHRVLVGMVSAAANA 232
G + L +P+ +++K + L KEP VD V++ L V+V M +A
Sbjct: 389 RNIHGIRVGLFTPDMAFEAIVKRQIALLKEPVIKCVDLVVQELS----VVVRMCTAK--- 441
Query: 233 TPGLGRYPLFKREVVAIASAALDGFKNEARKMVVALVDMERAFVPPQH 280
+ RYP + E I + + ++ ++ ++ L+D E A++ H
Sbjct: 442 ---MSRYPRLREETERIITTHVRQREHSCKEQILLLIDFELAYMNTNH 486
>sp|P50570|DYN2_HUMAN Dynamin-2 OS=Homo sapiens GN=DNM2 PE=1 SV=2
Length = 870
Score = 41.6 bits (96), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 44/234 (18%), Positives = 90/234 (38%), Gaps = 24/234 (10%)
Query: 58 SQLGRIALADDLAQLIRKRMKVRVPNLLSGLQGK-----------SQIVQDELVRLGEQM 106
++G L L Q + ++ +P L S LQ + D+ R + +
Sbjct: 270 DRMGTPHLQKTLNQQLTNHIRESLPALRSKLQSQLLSLEKEVEEYKNFRPDDPTRKTKAL 329
Query: 107 VQSVEGTRSLSLELCREFEDKFLQLITTGEGSGWKIVASFEGNFPNRIKQLPLDRRFDIN 166
+Q V+ ++ + E Q+ T G +I F FP + ++ D +
Sbjct: 330 LQMVQ---QFGVDFEKRIEGSGDQVDTLELSGGARINRIFHERFPFELVKMEFDEKDLRR 386
Query: 167 NVQRIVLEADGYQPYLISPEKGLRSLIKGVLELAKEPSRLSVDEVIEPLKHVHRVLVGMV 226
+ + G + L +P+ +++K + KEP VD VI+ L +
Sbjct: 387 EISYAIKNIHGVRTGLFTPDLAFEAIVKKQVVKLKEPCLKCVDLVIQEL----------I 436
Query: 227 SAAANATPGLGRYPLFKREVVAIASAALDGFKNEARKMVVALVDMERAFVPPQH 280
+ T L YP + E I + + + + ++ L+D+E++++ H
Sbjct: 437 NTVRQCTSKLSSYPRLREETERIVTTYIREREGRTKDQILLLIDIEQSYINTNH 490
>sp|A6H7I5|DYN2_BOVIN Dynamin-2 OS=Bos taurus GN=DNM2 PE=2 SV=1
Length = 866
Score = 41.6 bits (96), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 44/234 (18%), Positives = 90/234 (38%), Gaps = 24/234 (10%)
Query: 58 SQLGRIALADDLAQLIRKRMKVRVPNLLSGLQGK-----------SQIVQDELVRLGEQM 106
++G L L Q + ++ +P L S LQ + D+ R + +
Sbjct: 270 DRMGTPHLQKTLNQQLTNHIRESLPALRSKLQSQLLSLEKEVEEYKNFRPDDPTRKTKAL 329
Query: 107 VQSVEGTRSLSLELCREFEDKFLQLITTGEGSGWKIVASFEGNFPNRIKQLPLDRRFDIN 166
+Q V+ ++ + E Q+ T G +I F FP + ++ D +
Sbjct: 330 LQMVQ---QFGVDFEKRIEGSGDQVDTLELSGGARINRIFHERFPFELVKMEFDEKDLRR 386
Query: 167 NVQRIVLEADGYQPYLISPEKGLRSLIKGVLELAKEPSRLSVDEVIEPLKHVHRVLVGMV 226
+ + G + L +P+ +++K + KEP VD VI+ L +
Sbjct: 387 EISYAIKNIHGVRTGLFTPDLAFEAIVKKQVVKLKEPCLKCVDLVIQEL----------I 436
Query: 227 SAAANATPGLGRYPLFKREVVAIASAALDGFKNEARKMVVALVDMERAFVPPQH 280
+ T L YP + E I + + + + ++ L+D+E++++ H
Sbjct: 437 NTVRQCTSKLSSYPRLREETERIVTTYIREREGRTKDQILLLIDIEQSYINTNH 490
>sp|P21575|DYN1_RAT Dynamin-1 OS=Rattus norvegicus GN=Dnm1 PE=1 SV=2
Length = 864
Score = 40.4 bits (93), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 37/176 (21%), Positives = 71/176 (40%), Gaps = 16/176 (9%)
Query: 105 QMVQSVEGTRSLSLELCREFEDKFLQLITTGEGSGWKIVASFEGNFPNRIKQLPLDRRFD 164
QMVQ +++ + E Q+ T G +I F FP + ++ D +
Sbjct: 331 QMVQQ------FAVDFEKRIEGSGDQIDTYELSGGARINRIFHERFPFELVKMEFDEKEL 384
Query: 165 INNVQRIVLEADGYQPYLISPEKGLRSLIKGVLELAKEPSRLSVDEVIEPLKHVHRVLVG 224
+ + G + L +P+ + +K ++ KEPS VD V+ L
Sbjct: 385 RREISYAIKNIHGIRTGLFTPDLAFEATVKKQVQKLKEPSIKCVDMVVSEL--------- 435
Query: 225 MVSAAANATPGLGRYPLFKREVVAIASAALDGFKNEARKMVVALVDMERAFVPPQH 280
S + L +YP + E+ I + + + ++ V+ L+D+E A++ H
Sbjct: 436 -TSTIRKCSEKLQQYPRLREEMERIVTTHIREREGRTKEQVMLLIDIELAYMNTNH 490
>sp|Q94464|DYNA_DICDI Dynamin-A OS=Dictyostelium discoideum GN=dymA PE=1 SV=2
Length = 853
Score = 40.0 bits (92), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 87/212 (41%), Gaps = 24/212 (11%)
Query: 77 MKVRVPNLLSGLQGKSQIVQDELVRLGEQMVQSVEGTRSLSLELCREFEDKF-------L 129
+KV+V +LS +QG EL G+ + + +L L++ F F L
Sbjct: 298 LKVKVSKMLSDVQG-------ELSTYGDPLYDTKNSQGALLLQIITIFSSNFKDAIDGKL 350
Query: 130 QLITTGE-GSGWKIVASFEGNFPNRIKQLPLDRRFDINNVQRIVLEADGYQPYLISPEKG 188
++ E G +I F + + + + +N+++ + A G + L PE
Sbjct: 351 TDLSNNELYGGARISYIFNEIYSHCVNNIDPLEGISLNDIRTTMRNATGPRAALFIPEIS 410
Query: 189 LRSLIKGVLELAKEPSRLSVDEVIEPLKHVHRVLVGMVSAAANATPGLGRYPLFKREVVA 248
L+K + +EPS V+ V + L+ + V + A L R+ K V+
Sbjct: 411 FELLVKKQVVRLEEPSAQCVEYVYDELQRI----VSQLEAKE-----LSRFINLKARVIE 461
Query: 249 IASAALDGFKNEARKMVVALVDMERAFVPPQH 280
+ + L K + M+ L+ +E AF+ H
Sbjct: 462 VVNNLLQKHKVPTKTMIEHLIKIETAFINTSH 493
>sp|Q08DF4|DYN1_BOVIN Dynamin-1 OS=Bos taurus GN=DNM1 PE=2 SV=1
Length = 856
Score = 39.7 bits (91), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 37/184 (20%), Positives = 76/184 (41%), Gaps = 13/184 (7%)
Query: 97 DELVRLGEQMVQSVEGTRSLSLELCREFEDKFLQLITTGEGSGWKIVASFEGNFPNRIKQ 156
D+ R + ++Q V+ +++ + E Q+ T G +I F FP + +
Sbjct: 320 DDPARKTKALLQMVQ---QFAVDFEKRIEGSGDQIDTYELSGGARINRIFHERFPFELVK 376
Query: 157 LPLDRRFDINNVQRIVLEADGYQPYLISPEKGLRSLIKGVLELAKEPSRLSVDEVIEPLK 216
+ D + + + G + L +P+ + +K ++ KEPS VD V+ L
Sbjct: 377 MEFDEKELRREISYAIKNIHGIRTGLFTPDLAFEATVKKQVQKLKEPSIKCVDMVVSELT 436
Query: 217 HVHRVLVGMVSAAANATPGLGRYPLFKREVVAIASAALDGFKNEARKMVVALVDMERAFV 276
R + L +YP + E+ I + + + ++ V+ L+D+E A++
Sbjct: 437 ATIR----------KCSEKLQQYPRLREEMERIVTTHIREREGRTKEQVMLLIDIELAYM 486
Query: 277 PPQH 280
H
Sbjct: 487 NTNH 490
>sp|Q7SXN5|DNM1L_DANRE Dynamin-1-like protein OS=Danio rerio GN=dnm1l PE=2 SV=1
Length = 691
Score = 37.4 bits (85), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 96/229 (41%), Gaps = 20/229 (8%)
Query: 61 GRIALADDLAQLIRKRMKVRVPNLLSGLQGKSQIVQDELVRLGEQMVQSVEGTRSLSLEL 120
G LA L +L+ ++ +P L + + S Q L GE VE + L+L
Sbjct: 280 GTKYLARTLNRLLMHHIRDCLPELKTRINVLSAQYQSLLSSYGE----PVEDMSATLLQL 335
Query: 121 CREFEDKFL-------QLITTGE-GSGWKIVASFEGNFPNRIKQL-PLDRRFDINNVQRI 171
+F ++ + I T E G +I F F ++ + PL I+ V
Sbjct: 336 ITKFATEYCNTIEGTAKYIETAELCGGARICYIFHETFGRTLESVDPLGGLTTID-VLTA 394
Query: 172 VLEADGYQPYLISPEKGLRSLIKGVLELAKEPSRLSVDEVIEPLKHVHRVLVGMVSAAAN 231
+ A G +P L PE L+K ++ +EPS V+ V E ++ + + +
Sbjct: 395 IRNATGPRPALFVPEVSFELLVKRQVKRLEEPSLRCVELVHEEMQRI------IQHCSNY 448
Query: 232 ATPGLGRYPLFKREVVAIASAALDGFKNEARKMVVALVDMERAFVPPQH 280
+T L R+P +V + ++ L +MV LV +E A++ +H
Sbjct: 449 STQELLRFPKLHDAIVEVVTSLLRKRLPVTNEMVHNLVAIELAYINTKH 497
>sp|O00429|DNM1L_HUMAN Dynamin-1-like protein OS=Homo sapiens GN=DNM1L PE=1 SV=2
Length = 736
Score = 36.2 bits (82), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 35/165 (21%), Positives = 67/165 (40%), Gaps = 6/165 (3%)
Query: 116 LSLELCREFEDKFLQLITTGEGSGWKIVASFEGNFPNRIKQLPLDRRFDINNVQRIVLEA 175
+ E C E + T+ G +I F F ++ + + ++ + A
Sbjct: 340 FATEYCNTIEGTAKYIETSELCGGARICYIFHETFGRTLESVDPLGGLNTIDILTAIRNA 399
Query: 176 DGYQPYLISPEKGLRSLIKGVLELAKEPSRLSVDEVIEPLKHVHRVLVGMVSAAANATPG 235
G +P L PE L+K ++ +EPS V+ V E ++ + + + +T
Sbjct: 400 TGPRPALFVPEVSFELLVKRQIKRLEEPSLRCVELVHEEMQRI------IQHCSNYSTQE 453
Query: 236 LGRYPLFKREVVAIASAALDGFKNEARKMVVALVDMERAFVPPQH 280
L R+P +V + + L +MV LV +E A++ +H
Sbjct: 454 LLRFPKLHDAIVEVVTCLLRKRLPVTNEMVHNLVAIELAYINTKH 498
>sp|Q2KIA5|DNM1L_BOVIN Dynamin-1-like protein OS=Bos taurus GN=DNM1L PE=2 SV=1
Length = 749
Score = 36.2 bits (82), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 35/165 (21%), Positives = 67/165 (40%), Gaps = 6/165 (3%)
Query: 116 LSLELCREFEDKFLQLITTGEGSGWKIVASFEGNFPNRIKQLPLDRRFDINNVQRIVLEA 175
+ E C E + T+ G +I F F ++ + + ++ + A
Sbjct: 353 FATEYCNTIEGTAKYIETSELCGGARICYIFHETFGRTLESVDPLGGLNTIDILTAIRNA 412
Query: 176 DGYQPYLISPEKGLRSLIKGVLELAKEPSRLSVDEVIEPLKHVHRVLVGMVSAAANATPG 235
G +P L PE L+K ++ +EPS V+ V E ++ + + + +T
Sbjct: 413 TGPRPALFVPEVSFELLVKRQIKRLEEPSLRCVELVHEEMQRI------IQHCSNYSTQE 466
Query: 236 LGRYPLFKREVVAIASAALDGFKNEARKMVVALVDMERAFVPPQH 280
L R+P +V + + L +MV LV +E A++ +H
Sbjct: 467 LLRFPKLHDAIVEVVTCLLRKRLPVTNEMVHNLVAIELAYINTKH 511
>sp|Q8K1M6|DNM1L_MOUSE Dynamin-1-like protein OS=Mus musculus GN=Dnm1l PE=1 SV=2
Length = 742
Score = 36.2 bits (82), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 35/165 (21%), Positives = 67/165 (40%), Gaps = 6/165 (3%)
Query: 116 LSLELCREFEDKFLQLITTGEGSGWKIVASFEGNFPNRIKQLPLDRRFDINNVQRIVLEA 175
+ E C E + T+ G +I F F ++ + + ++ + A
Sbjct: 346 FATEYCNTIEGTAKYIETSELCGGARICYIFHETFGRTLESVDPLGGLNTIDILTAIRNA 405
Query: 176 DGYQPYLISPEKGLRSLIKGVLELAKEPSRLSVDEVIEPLKHVHRVLVGMVSAAANATPG 235
G +P L PE L+K ++ +EPS V+ V E ++ + + + +T
Sbjct: 406 TGPRPALFVPEVSFELLVKRQIKRLEEPSLRCVELVHEEMQRI------IQHCSNYSTQE 459
Query: 236 LGRYPLFKREVVAIASAALDGFKNEARKMVVALVDMERAFVPPQH 280
L R+P +V + + L +MV LV +E A++ +H
Sbjct: 460 LLRFPKLHDAIVEVVTCLLRKRLPVTNEMVHNLVAIELAYINTKH 504
>sp|O35303|DNM1L_RAT Dynamin-1-like protein OS=Rattus norvegicus GN=Dnm1l PE=1 SV=1
Length = 755
Score = 36.2 bits (82), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 35/165 (21%), Positives = 67/165 (40%), Gaps = 6/165 (3%)
Query: 116 LSLELCREFEDKFLQLITTGEGSGWKIVASFEGNFPNRIKQLPLDRRFDINNVQRIVLEA 175
+ E C E + T+ G +I F F ++ + + ++ + A
Sbjct: 353 FATEYCNTIEGTAKYIETSELCGGARICYIFHETFGRTLESVDPLGGLNTIDILTAIRNA 412
Query: 176 DGYQPYLISPEKGLRSLIKGVLELAKEPSRLSVDEVIEPLKHVHRVLVGMVSAAANATPG 235
G +P L PE L+K ++ +EPS V+ V E ++ + + + +T
Sbjct: 413 TGPRPALFVPEVSFELLVKRQIKRLEEPSLRCVELVHEEMQRI------IQHCSNYSTQE 466
Query: 236 LGRYPLFKREVVAIASAALDGFKNEARKMVVALVDMERAFVPPQH 280
L R+P +V + + L +MV LV +E A++ +H
Sbjct: 467 LLRFPKLHDAIVEVVTCLLRKRLPVTNEMVHNLVAIELAYINTKH 511
>sp|P39853|CAPD_STAAU Capsular polysaccharide biosynthesis protein CapD OS=Staphylococcus
aureus GN=capD PE=3 SV=1
Length = 599
Score = 34.7 bits (78), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 57/125 (45%), Gaps = 27/125 (21%)
Query: 115 SLSLELCRE---FEDKFLQLITTGEGSGWKIVASFEGNFPNRIKQLPLDRRFDINNVQRI 171
S+ E+CR+ F+ + + L+ GE S + I + NRI+ +P+ D+ N RI
Sbjct: 292 SIGSEICRQVSKFDPQKIILLGHGENSIYSIHQELSKTYGNRIEFVPVIA--DVQNKTRI 349
Query: 172 VLEADGYQPYLI--------------SPEKGLRSLI---KGVLELAKEPS-----RLSVD 209
+ + ++PY + +P + +R+ I K V E AKE +S D
Sbjct: 350 LEVMNEFKPYAVYHAAAHKHVPLMEYNPHEAIRNNILGTKNVAESAKEGEVSKFVMISTD 409
Query: 210 EVIEP 214
+ + P
Sbjct: 410 KAVNP 414
>sp|P37586|METH_SALTY Methionine synthase OS=Salmonella typhimurium (strain LT2 / SGSC1412
/ ATCC 700720) GN=metH PE=3 SV=3
Length = 1227
Score = 33.9 bits (76), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 52/124 (41%), Gaps = 16/124 (12%)
Query: 25 SIATTQSGSEISLETAWTAESESLKSILIGAPQSQLGRIALADDLAQLIRKRMKVRVPNL 84
+ A T E +L A+ A+ + I++ A +AD LA+ + + RV +
Sbjct: 1060 AFAVTGGLEEDALADAFEAQHDDYNKIMVKA---------IADRLAEAFAEYLHERVRKV 1110
Query: 85 LSGLQGKSQIVQDELVRLGEQMVQSVEGTRSLSLELCREFEDK--FLQLITTGEGSGWKI 142
G + DEL+R Q ++ G + C E +K QL+ + +G K+
Sbjct: 1111 YWGYAPNESLSNDELIRENYQGIRPAPGYPA-----CPEHTEKGTIWQLLDVEKHTGMKL 1165
Query: 143 VASF 146
SF
Sbjct: 1166 TESF 1169
>sp|Q8S944|DRP3A_ARATH Dynamin-related protein 3A OS=Arabidopsis thaliana GN=DRP3A PE=1
SV=2
Length = 808
Score = 33.9 bits (76), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 47/231 (20%), Positives = 96/231 (41%), Gaps = 20/231 (8%)
Query: 59 QLGRIALADDLAQLIRKRMKVRVPNLLSGLQGKSQIVQDELVRLGEQMVQSVEGTRSLSL 118
+LG LA L Q++ + +KV +P+L S + E GE + +S G +L L
Sbjct: 307 RLGVPQLAKKLNQILVQHIKVLLPDLKSRISNALVATAKEHQSYGE-LTESRAGQGALLL 365
Query: 119 ELCREFEDKFLQLI-------TTGEGSGW-KIVASFEGNFPNRIKQLPLDRRFDINNVQR 170
++ + + L+ +T E SG +I F+ F ++++ ++++
Sbjct: 366 NFLSKYCEAYSSLLEGKSEEMSTSELSGGARIHYIFQSIFVKSLEEVDPCEDLTDDDIRT 425
Query: 171 IVLEADGYQPYLISPEKGLRSLIKGVLELAKEPSRLSVDEVIEPL-KHVHRVLVGMVSAA 229
+ A G + L P+ L++ + +PS + E L K HR ++
Sbjct: 426 AIQNATGPRSALFVPDVPFEVLVRRQISRLLDPSLQCARFIFEELIKISHRCMMN----- 480
Query: 230 ANATPGLGRYPLFKREVVAIASAALDGFKNEARKMVVALVDMERAFVPPQH 280
L R+P+ ++ + + L + M+ ++DME ++ H
Sbjct: 481 -----ELQRFPVLRKRMDEVIGDFLREGLEPSEAMIGDIIDMEMDYINTSH 526
>sp|Q00218|AROG_ARATH Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplastic
OS=Arabidopsis thaliana GN=DHS2 PE=2 SV=2
Length = 507
Score = 33.5 bits (75), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 33/51 (64%), Gaps = 3/51 (5%)
Query: 45 SESLKSILIGAPQSQLGRIALADDLAQLIRKRMKVRVPNLLSGLQGKSQIV 95
SE +K I I PQ++ GRI + + ++ + M+V++PNL+ ++G QIV
Sbjct: 345 SELVKLIEILNPQNKPGRITV---IVRMGAENMRVKLPNLIRAVRGAGQIV 392
>sp|A1E9I8|ATPA_HORVU ATP synthase subunit alpha, chloroplastic OS=Hordeum vulgare
GN=atpA PE=3 SV=1
Length = 504
Score = 31.2 bits (69), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 75/162 (46%), Gaps = 32/162 (19%)
Query: 67 DDLAQLIRKRMKVRVPNLLSGLQGKSQIVQ--DELVR---LGE----QMVQSVEGTRSLS 117
D++ +++R+R++ N G++ ++VQ D + R LGE ++VQ EGTR ++
Sbjct: 7 DEIHKILRERIEQY--NRKVGIENIGRVVQVGDGIARIIGLGEIMSGELVQFAEGTRGIA 64
Query: 118 LELCREFEDKFLQLITTGEGSGWKIVASFEGNF---PNRIKQLPLDRRFDINNVQRIVLE 174
L L E K + ++ G+G + EG+F RI Q+P+ + V +
Sbjct: 65 LNL----ESKNVGIVLMGDGLMIQ-----EGSFVKATGRIAQIPVSEAYLGRVVNALAKP 115
Query: 175 ADGYQPYLISPEKGLRSLIKGVLELAKEPSRLSVDEVIEPLK 216
DG + S + + S PS +S V EPL+
Sbjct: 116 IDGKGEIIASESRLIES---------PAPSIISRRSVYEPLQ 148
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.135 0.377
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 96,689,021
Number of Sequences: 539616
Number of extensions: 3755238
Number of successful extensions: 12753
Number of sequences better than 100.0: 48
Number of HSP's better than 100.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 30
Number of HSP's that attempted gapping in prelim test: 12720
Number of HSP's gapped (non-prelim): 48
length of query: 288
length of database: 191,569,459
effective HSP length: 116
effective length of query: 172
effective length of database: 128,974,003
effective search space: 22183528516
effective search space used: 22183528516
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (28.1 bits)