BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 044157
(481 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P0AAD5|TYRP_SHIFL Tyrosine-specific transport protein OS=Shigella flexneri GN=tyrP
PE=3 SV=1
Length = 403
Score = 136 bits (343), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 109/365 (29%), Positives = 188/365 (51%), Gaps = 33/365 (9%)
Query: 95 AIFLVAGTTVGAGILAIPAVTQEAGFLASAVAVILCWIFMVVTGLLIAEVNVNTMCELGS 154
++F+VAGTT+GAG+LA+P GF + + +I W M T LL+ EV + + G
Sbjct: 8 SVFIVAGTTIGAGMLAMPLAAAGVGFSVTLILLIGLWALMCYTALLLLEVYQHVPADTGL 67
Query: 155 GGVSLVSMAMRTIGTVGVQIASWSYIFIHYTLLVAYVARSSDIL----TNFLGIPLWESA 210
G ++A R +G G + +S +F+ Y L AY++ + ++L +++ GI + +A
Sbjct: 68 G-----TLAKRYLGRYGQWLTGFSMMFLMYALTAAYISGAGELLASSISDWTGISMSATA 122
Query: 211 --TLFSLILGGLCYFGSQRFIGAANGALVVGIIISFTALVFVASGDLQWNALLKANFEAV 268
LF+ + GG+ G+ + N L II ++ + + K N +
Sbjct: 123 GVLLFTFVAGGVVCVGTS-LVDLFNRFLFSAKIIFLVVMLVLLLPHIH-----KVNLLTL 176
Query: 269 PM-------SIPIIALSFVYQNVVPVLCTNLEGNLSKVRTAIVVGTSIPLGLFLVWNAVI 321
P+ +IP+I SF + VP + + ++GN+ K+R ++G++IPL ++ W
Sbjct: 177 PLQQGLALSAIPVIFTSFGFHGSVPSIVSYMDGNIRKLRWVFIIGSAIPLVAYIFWQVAT 236
Query: 322 LGSIS-----GLEMSSGQIVDPIQQLRS--SNGAVGPIIDVFSFLAIATSYIGFILGLSD 374
LGSI GL + + +Q LR ++ V + +F+ LA+ATS++G LGL D
Sbjct: 237 LGSIDSTTFMGLLANHAGLNGLLQALREMVASPHVELAVHLFADLALATSFLGVALGLFD 296
Query: 375 FLADLLKLPSGQSSP-QPYLLTLIPPLVLSLLDPEIFFKALDFAGTYGVLVLFGILPAVM 433
+LADL + + Q +T +PPL +L P F AL +AG + VL I+P+++
Sbjct: 297 YLADLFQRSNTVGGRLQTGAITFLPPLAFALFYPRGFVMALGYAGV-ALAVLALIIPSLL 355
Query: 434 SWSDR 438
+W R
Sbjct: 356 TWQSR 360
>sp|P0AAD4|TYRP_ECOLI Tyrosine-specific transport protein OS=Escherichia coli (strain
K12) GN=tyrP PE=1 SV=1
Length = 403
Score = 136 bits (343), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 109/365 (29%), Positives = 188/365 (51%), Gaps = 33/365 (9%)
Query: 95 AIFLVAGTTVGAGILAIPAVTQEAGFLASAVAVILCWIFMVVTGLLIAEVNVNTMCELGS 154
++F+VAGTT+GAG+LA+P GF + + +I W M T LL+ EV + + G
Sbjct: 8 SVFIVAGTTIGAGMLAMPLAAAGVGFSVTLILLIGLWALMCYTALLLLEVYQHVPADTGL 67
Query: 155 GGVSLVSMAMRTIGTVGVQIASWSYIFIHYTLLVAYVARSSDIL----TNFLGIPLWESA 210
G ++A R +G G + +S +F+ Y L AY++ + ++L +++ GI + +A
Sbjct: 68 G-----TLAKRYLGRYGQWLTGFSMMFLMYALTAAYISGAGELLASSISDWTGISMSATA 122
Query: 211 --TLFSLILGGLCYFGSQRFIGAANGALVVGIIISFTALVFVASGDLQWNALLKANFEAV 268
LF+ + GG+ G+ + N L II ++ + + K N +
Sbjct: 123 GVLLFTFVAGGVVCVGTS-LVDLFNRFLFSAKIIFLVVMLVLLLPHIH-----KVNLLTL 176
Query: 269 PM-------SIPIIALSFVYQNVVPVLCTNLEGNLSKVRTAIVVGTSIPLGLFLVWNAVI 321
P+ +IP+I SF + VP + + ++GN+ K+R ++G++IPL ++ W
Sbjct: 177 PLQQGLALSAIPVIFTSFGFHGSVPSIVSYMDGNIRKLRWVFIIGSAIPLVAYIFWQVAT 236
Query: 322 LGSIS-----GLEMSSGQIVDPIQQLRS--SNGAVGPIIDVFSFLAIATSYIGFILGLSD 374
LGSI GL + + +Q LR ++ V + +F+ LA+ATS++G LGL D
Sbjct: 237 LGSIDSTTFMGLLANHAGLNGLLQALREMVASPHVELAVHLFADLALATSFLGVALGLFD 296
Query: 375 FLADLLKLPSGQSSP-QPYLLTLIPPLVLSLLDPEIFFKALDFAGTYGVLVLFGILPAVM 433
+LADL + + Q +T +PPL +L P F AL +AG + VL I+P+++
Sbjct: 297 YLADLFQRSNTVGGRLQTGAITFLPPLAFALFYPRGFVMALGYAGV-ALAVLALIIPSLL 355
Query: 434 SWSDR 438
+W R
Sbjct: 356 TWQSR 360
>sp|P44747|TYRPB_HAEIN Tyrosine-specific transport protein 2 OS=Haemophilus influenzae
(strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=tyrP-B
PE=3 SV=1
Length = 406
Score = 114 bits (286), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 122/404 (30%), Positives = 205/404 (50%), Gaps = 45/404 (11%)
Query: 88 ESGSLSSAIFLVAGTTVGAGILAIPAVTQEAGFLASAVAVILCWIFMVVTGLLIAEVNVN 147
++ + SA+ ++AGTT+GAG+LA+P + GF + + ++ W +V +GLL EV
Sbjct: 3 KNKTFGSAL-IIAGTTIGAGMLAMPLTSAGMGFGYTLLLLVGLWALLVYSGLLFVEVY-Q 60
Query: 148 TMCELGSGGVSLVSMAMRTIGTVGVQIASWSYIFIHYTLLVAYVARSSDILTNFLGIP-- 205
T +L G + ++A + G G A+ S + + Y L AY+ +L+ G+P
Sbjct: 61 TADQLDDG---VATLAEKYFGVPGRIFATLSLLVLLYALSAAYITGGGSLLS---GLPTA 114
Query: 206 -------LWESATLFSLILGGLCYFGSQRFIGAANGALVVGIIISFTALVFVASGDLQWN 258
L + +F+++LG G++ G L +G +I+F ++F+ + +
Sbjct: 115 FGMEAMSLKTAIIIFTVVLGSFVVVGTKGVDGLTR-VLFIGKLIAFAFVLFMMLPKVATD 173
Query: 259 AL--LKANFEAVPMSIPIIALSFVYQNVVPVLCTNLEGNLSKVRTAIVVGTSIPLGLFLV 316
L L ++ V + PI SF + ++ + + L G++ K R AI++GT+IPL +LV
Sbjct: 174 NLMALPLDYAFVVSAAPIFLTSFGFHVIMASVNSYLGGSVDKFRRAILIGTAIPLAAYLV 233
Query: 317 WNAVILGSISGLEMSSGQIVDP-----IQQLRSSNGA--VGPIIDVFSFLAIATSYIGFI 369
W G +S E DP + R G+ +G ++ VFS LA+ TS++G +
Sbjct: 234 WQLATHGVLSQSEFVRILQADPTLNGLVNATREITGSHFMGEVVRVFSSLALITSFLGVM 293
Query: 370 LGLSDFLADLLK---LPSGQSSPQPYLLTL---IPPLVLSLLDPEIFFKALDFAGTYGVL 423
LG+ + L DL K LP+ + ++LT+ +PPLV +L PE F AL +AG
Sbjct: 294 LGVFEGLGDLFKRYHLPNNR-----FVLTIAAFLPPLVFALFYPEGFITALSYAGLLCAF 348
Query: 424 VLFGILPAVMSWSDRYSSSSPSMTIPRIVPGGK--LTLSLVIGV 465
ILP ++W R + T+P V GG L L+L+IGV
Sbjct: 349 YCL-ILPISLAWRTRIENP----TLPYRVAGGNFALVLALLIGV 387
>sp|P44614|MTR_HAEIN Tryptophan-specific transport protein OS=Haemophilus influenzae
(strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=mtr PE=3
SV=1
Length = 418
Score = 110 bits (274), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 106/405 (26%), Positives = 188/405 (46%), Gaps = 37/405 (9%)
Query: 85 LKRESGSLSSAIFLVAGTTVGAGILAIPAVTQEAGFLASAVAVILCWIFMVVTGLLIAEV 144
++++S SL ++AGT +GAG+LA P T F+ S +A+I W M +GL+I E
Sbjct: 2 IQQKSPSLLGGAMIIAGTAIGAGMLANPTSTAGVWFIGSILALIYTWFCMTTSGLMILEA 61
Query: 145 NVNTMCELGSGGVSLVSMAMRTIGTVGVQIASWSYIFIHYTLLVAYVARSSDILTNFLGI 204
N++ G S ++ +G I S F+ Y L AY+ I N L
Sbjct: 62 NLHYPT-----GSSFDTIVKDLLGKSWNTINGLSVAFVLYILTYAYITSGGGITQNLLNQ 116
Query: 205 PL--WESAT---------LFSLILGGLCYFGSQRFIGAANGALVVGIIISF----TALVF 249
ESA +F LIL + S + + L+VG++++F T L+
Sbjct: 117 AFSSAESAVDIGRTSGSLIFCLILAAFVWL-STKAVDRFTTVLIVGMVVAFFLSTTGLLS 175
Query: 250 VASGDLQWNALLKANFEAVPM---SIPIIALSFVYQNVVPVLCTNLEGNLSKVRTAIVVG 306
+ +N + ++ +P ++P+ +SF + VP L + + +V +I +G
Sbjct: 176 SVKTAVLFNTVAESEQTYLPYLLTALPVCLVSFGFHGNVPSLVKYYDRDGRRVMKSIFIG 235
Query: 307 TSIPLGLFLVWNAVILGSISGLEMS-----SGQIVDPIQQLRS--SNGAVGPIIDVFSFL 359
T + L ++++W + G++ E + G + ++ L + ++ F+++
Sbjct: 236 TGLALVIYILWQLAVQGNLPRTEFAPVIEKGGDVSALLEALHKYIEVEYLSVALNFFAYM 295
Query: 360 AIATSYIGFILGLSDFLADLLKLPSG-QSSPQPYLLTLIPPLVLSLLDPEIFFKALDFAG 418
AI+TS++G LGL D++ADL K + L+T +PPL+LSL P F A+ +AG
Sbjct: 296 AISTSFLGVTLGLFDYIADLFKFDDSLLGRTKTTLVTFLPPLLLSLQFPYGFVIAIGYAG 355
Query: 419 TYGVLVLFGILPAVMSWSDRYSSSSPSMTIPRIVPGGKLTLSLVI 463
+ I+PA+++ + R S V GG + VI
Sbjct: 356 L-AATIWAAIVPALLAKASRQKFPQASYK----VYGGNFMIGFVI 395
>sp|P44727|TYRPA_HAEIN Tyrosine-specific transport protein 1 OS=Haemophilus influenzae
(strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=tyrP-A
PE=3 SV=1
Length = 400
Score = 104 bits (259), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 111/399 (27%), Positives = 195/399 (48%), Gaps = 47/399 (11%)
Query: 98 LVAGTTVGAGILAIPAVTQEAGFLASAVAVILCWIFMVVTGLLIAEVNVNTMCELGSGGV 157
LVAGT +GAG+LA+P + GF + V ++ W + + LL E+ + G G
Sbjct: 10 LVAGTMIGAGMLAMPLTSAGIGFGFTLVLLLGLWALLTFSALLFVELYQTAESDAGIG-- 67
Query: 158 SLVSMAMRTIGTVGVQIASWSYIFIHYTLLVAYVARSSDILTNFLGIPLWE--SATLFSL 215
++A + G G IA+ I Y L+ AY++ +L + L + S LF++
Sbjct: 68 ---TLAEQYFGKTGRIIATAVLIIFLYALIAAYISGGGSLLKDLLPESFGDKVSVLLFTV 124
Query: 216 ILGGLCYFGSQRFIGAANGALVVGIIISFTALVFVASGDLQWNALLKANFEAVPM--SIP 273
I G G+ + N L ++ +F ++ + +++++ L+ + + + P
Sbjct: 125 IFGSFIVIGTHS-VDKINRVLFFVMLAAFAVVLSLMLPEIKFDNLMATPIDKALIISASP 183
Query: 274 IIALSFVYQNVVPVLCTNLEGNLSKVRTAIVVGTSIPLGLFLVWNAVILGSISGLEMSSG 333
+ +F + +P L L+GN+ +R +I+VG++I L +++W S GL ++
Sbjct: 184 VFFTAFGFHGSIPSLNKYLDGNVKALRFSILVGSAITLCAYILWQL----STHGL-LTQN 238
Query: 334 QIVDPIQQLRSSNG------------AVGPIIDVFSFLAIATSYIGFILGLSDFLADLLK 381
+ + +++ + NG + + +FS LA+ TS++G LGL + + DLLK
Sbjct: 239 EFLQILKEDATLNGLVKATFAITGSNVIASAVKLFSTLALITSFLGVGLGLLECIEDLLK 298
Query: 382 ----LPSGQSSPQPYLLTLIPPLVLSLLDPEIFFKALDFAGT----YGVLVLFGILPAVM 433
+ +G+ S LLT IPPLV +L PE F AL +AG Y V +LP +
Sbjct: 299 RSFNVTAGRISLG--LLTFIPPLVFALFYPEGFILALGYAGQMFAFYAV-----VLPVSL 351
Query: 434 SWSDRYSSSSPSMTIPRIVPGGKLTLSLVIGVAGYIILS 472
W R + ++ +P V GG LTL +V+ V G +I S
Sbjct: 352 VWKARRAHAN----LPYKVWGGNLTLIIVL-VLGVLITS 385
>sp|P0AAD3|MTR_SHIFL Tryptophan-specific transport protein OS=Shigella flexneri GN=mtr
PE=3 SV=1
Length = 414
Score = 98.2 bits (243), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 111/397 (27%), Positives = 180/397 (45%), Gaps = 40/397 (10%)
Query: 108 ILAIPAVTQEAGFLASAVAVILCWIFMVVTGLLIAEVNVNTMCELGSGGVSLVSMAMRTI 167
+ ++P V A F S A+I W M+ +GL+I E N+N G S ++ +
Sbjct: 29 MFSLPVVMSGAWFFWSMAALIFTWFCMLHSGLMILEANLNYRI-----GSSFDTITKDLL 83
Query: 168 GTVGVQIASWSYIFIHYTLLVAYVARSSDILTNF-----LGIPLWESATLFSLILGGLCY 222
G + S F+ Y L AY++ S IL + L +P + F+L++ + +
Sbjct: 84 GKGWNVVNGISIAFVLYILTYAYISASGSILHHTFAEMSLNVPARAAGFGFALLVAFVVW 143
Query: 223 FGSQ---RFIGAANGALVVGIIISFTALVFVASGDLQWNALL---KANFEAVP---MSIP 273
++ R GA V+ ++F +L+ G +Q L ++N P M++P
Sbjct: 144 LSTKAVSRMTAIVLGAKVITFFLTFGSLL----GHVQPATLFNVAESNASYAPYLLMTLP 199
Query: 274 IIALSFVYQNVVPVLCTNLEGNLSKVRTAIVVGTSIPLGLFLVWNAVILGSIS-----GL 328
SF Y VP L + + +V GT + L L+ +W +G+I G+
Sbjct: 200 FCLASFGYHGNVPSLMKYYGKDPKTIVKCLVYGTLMALALYTIWLLATMGNIPRPEFIGI 259
Query: 329 EMSSGQIVDPIQQLRS--SNGAVGPIIDVFSFLAIATSYIGFILGLSDFLADLLKL-PSG 385
G I +Q L ++ ++ ++ VFS A+A+S++G LGL D+LADL S
Sbjct: 260 AEKGGNIDVLVQALSGVLNSRSLDLLLVVFSNFAVASSFLGVTLGLFDYLADLFGFDDSA 319
Query: 386 QSSPQPYLLTLIPPLVLSLLDPEIFFKALDFAGTYGVLVLFGILPAVMSWSDRYSSSSPS 445
+ LLT PP+V LL P F A+ +AG + I+PA+++ + R SP
Sbjct: 320 VGRLKTALLTFAPPVVGGLLFPNGFLYAIGYAGL-AATIWAAIVPALLARASRKRFGSPK 378
Query: 446 MTIPRIVPGGK--LTLSLVIGVAGYIILSEILEKFGL 480
V GGK + L LV GV ++ IL F L
Sbjct: 379 FR----VWGGKPMIALILVFGVGNALV--HILSSFNL 409
>sp|P0AAD2|MTR_ECOLI Tryptophan-specific transport protein OS=Escherichia coli (strain
K12) GN=mtr PE=1 SV=1
Length = 414
Score = 98.2 bits (243), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 111/397 (27%), Positives = 180/397 (45%), Gaps = 40/397 (10%)
Query: 108 ILAIPAVTQEAGFLASAVAVILCWIFMVVTGLLIAEVNVNTMCELGSGGVSLVSMAMRTI 167
+ ++P V A F S A+I W M+ +GL+I E N+N G S ++ +
Sbjct: 29 MFSLPVVMSGAWFFWSMAALIFTWFCMLHSGLMILEANLNYRI-----GSSFDTITKDLL 83
Query: 168 GTVGVQIASWSYIFIHYTLLVAYVARSSDILTNF-----LGIPLWESATLFSLILGGLCY 222
G + S F+ Y L AY++ S IL + L +P + F+L++ + +
Sbjct: 84 GKGWNVVNGISIAFVLYILTYAYISASGSILHHTFAEMSLNVPARAAGFGFALLVAFVVW 143
Query: 223 FGSQ---RFIGAANGALVVGIIISFTALVFVASGDLQWNALL---KANFEAVP---MSIP 273
++ R GA V+ ++F +L+ G +Q L ++N P M++P
Sbjct: 144 LSTKAVSRMTAIVLGAKVITFFLTFGSLL----GHVQPATLFNVAESNASYAPYLLMTLP 199
Query: 274 IIALSFVYQNVVPVLCTNLEGNLSKVRTAIVVGTSIPLGLFLVWNAVILGSIS-----GL 328
SF Y VP L + + +V GT + L L+ +W +G+I G+
Sbjct: 200 FCLASFGYHGNVPSLMKYYGKDPKTIVKCLVYGTLMALALYTIWLLATMGNIPRPEFIGI 259
Query: 329 EMSSGQIVDPIQQLRS--SNGAVGPIIDVFSFLAIATSYIGFILGLSDFLADLLKL-PSG 385
G I +Q L ++ ++ ++ VFS A+A+S++G LGL D+LADL S
Sbjct: 260 AEKGGNIDVLVQALSGVLNSRSLDLLLVVFSNFAVASSFLGVTLGLFDYLADLFGFDDSA 319
Query: 386 QSSPQPYLLTLIPPLVLSLLDPEIFFKALDFAGTYGVLVLFGILPAVMSWSDRYSSSSPS 445
+ LLT PP+V LL P F A+ +AG + I+PA+++ + R SP
Sbjct: 320 VGRLKTALLTFAPPVVGGLLFPNGFLYAIGYAGL-AATIWAAIVPALLARASRKRFGSPK 378
Query: 446 MTIPRIVPGGK--LTLSLVIGVAGYIILSEILEKFGL 480
V GGK + L LV GV ++ IL F L
Sbjct: 379 FR----VWGGKPMIALILVFGVGNALV--HILSSFNL 409
>sp|Q47825|TUTB_ENTAG Tyrosine permease OS=Enterobacter agglomerans GN=tutB PE=3 SV=1
Length = 416
Score = 98.2 bits (243), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 110/426 (25%), Positives = 201/426 (47%), Gaps = 47/426 (11%)
Query: 85 LKRESGSLSSAIFLVAGTTVGAGILAIPAVTQEAGFLASAVAVILCWIFMVVTGLLIAEV 144
+K+ + L S L+ T +G G+ ++P F +++ + L I M++TGL++ EV
Sbjct: 3 IKKTTPGLMSGTMLIIATVIGGGMFSLPIAMAGIWFPGASIILTLIAIMMLLTGLMLVEV 62
Query: 145 NVNTMCELGSGGVSLVSMAMRTIGTVGVQIASWSYIFIHYTLLVAYVARSSDILT----N 200
N++ GG S + +G + ++ F+ Y L AY++ SS +++
Sbjct: 63 NLHY-----GGGASFNTFTQDLLGHKWNVVVGIAFGFVLYILTYAYISGSSAVISQTVEK 117
Query: 201 FLG--IPLWESATLFSLILGGLCYFGSQRFIGAANGALVVGIIISFTALVFVASGDLQWN 258
+ G +P S + S+++GG+ ++ S +G L++G ++F F L W+
Sbjct: 118 YSGFYLPARLSVIIVSVLVGGIAWY-SSLLVGRITTVLIIGKFVAF----FATFSGLIWH 172
Query: 259 A----LLKANFEAVP---------MSIPIIALSFVYQNVVPVLCTNLEGN--LSKVRTAI 303
L+ + A+P M++P +S+ + VP L L G + + +I
Sbjct: 173 VEGAKLIDSAAWALPDTQYLPYILMTLPFCIISYGFHGNVPSLV-KLYGTQGVKNITRSI 231
Query: 304 VVGTSIPLGLFLVWNAVILGSISGLEMS-----SGQI---VDPIQQLRSSNGAVGPIIDV 355
+GT+ L L++ W V +G+IS + S G I V+ I L +S ++ I+
Sbjct: 232 FIGTAFALLLYIFWLVVTMGNISRADFSPIIAKGGNIDVFVEAIGGLFTST-SMDLILTF 290
Query: 356 FSFLAIATSYIGFILGLSDFLADLLKLPSGQSSP-QPYLLTLIPPLVLSLLDPEIFFKAL 414
F A+A+S + LGL D++ADL +S + L+T +PP V+ + P F A+
Sbjct: 291 FGNFAVASSLLAATLGLFDYIADLFHFSDDRSGRFKTALVTYLPPAVVCFILPGGFVYAI 350
Query: 415 DFAGTYGVLVLFGILPAVMSWSDRYSSSSPSMTIPRIVPGGKLTLSLVIGVAGYIILSEI 474
+AG + ILP + + R + T P + L+LVI V G++ L+ +
Sbjct: 351 GYAGL-AFTIWSVILPPFLVKAARKRFPTAVYT----APCNNMILNLVIVVGGFVYLTVV 405
Query: 475 LEKFGL 480
L+ F L
Sbjct: 406 LDVFRL 411
>sp|P23173|TNAB_ECOLI Low affinity tryptophan permease OS=Escherichia coli (strain K12)
GN=tnaB PE=1 SV=1
Length = 415
Score = 90.9 bits (224), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 111/426 (26%), Positives = 187/426 (43%), Gaps = 40/426 (9%)
Query: 81 NQATLKRESGSLSSAIFLVAGTTVGAGILAIPAVTQEAGFLASAVAVILCWIFMVVTGLL 140
+QA K S + ++AGT +G G+ A+P A F A +I+ W M+ +GLL
Sbjct: 3 DQAEKKH---SAFWGVMVIAGTVIGGGMFALPVDLAGAWFFWGAFILIIAWFSMLHSGLL 59
Query: 141 IAEVNVNTMCELGSGGVSLVSMAMRTIGTVGVQIASWSYIFIHYTLLVAYVARSSDILTN 200
+ E N+N G S ++ IG I+ + F+ Y L AY++ + I++
Sbjct: 60 LLEANLNYPV-----GSSFNTITKDLIGNTWNIISGITVAFVLYILTYAYISANGAIISE 114
Query: 201 FLGIPLWESAT---------LFSLILGGLCYFGSQRFIGAANGALVVGIIISFTALVFVA 251
+ + L A +F + L + R G ++ +I F + F
Sbjct: 115 TISMNLGYHANPRIVGICTAIFVASVLWLSSLAASRITSLFLGLKIISFVIVFGSFFFQV 174
Query: 252 SGDLQWNALLK----ANFEAVPMSIPIIALSFVYQNVVPVLCTNLEGNLSKVRTAIVVGT 307
+ +A + F + M++P+ SF + +P L K+ ++V G+
Sbjct: 175 DYSILRDATSSTAGTSYFPYIFMALPVCLASFGFHGNIPSLIICYGKRKDKLIKSVVFGS 234
Query: 308 SIPLGLFLVWNAVILGSISGLE----MSSGQIVDPIQQL---RSSNGAVGPIIDVFSFLA 360
+ L ++L W +G+I +SSG VD + + +G + + VFS LA
Sbjct: 235 LLALVIYLFWLYCTMGNIPRESFKAIISSGGNVDSLVKSFLGTKQHGIIEFCLLVFSNLA 294
Query: 361 IATSYIGFILGLSDFLADLLKLPSGQSSP-QPYLLTLIPPLVLSLLDPEIFFKALDFAGT 419
+A+S+ G LGL D+LADL K+ + + LLT +PP +L L+ P F + AG
Sbjct: 295 VASSFFGVTLGLFDYLADLFKIDNSHGGRFKTVLLTFLPPALLYLIFPNGFIYGIGGAGL 354
Query: 420 YGVLVLFGILPAVMSWSDRYSSSSPSMTIPRIVPGGKLTLSLVIGVAGYIILS------E 473
+ I+PAV++ R + T V GG L ++VI +IL
Sbjct: 355 CATIWAV-IIPAVLAIKARKKFPNQMFT----VWGGNLIPAIVILFGITVILCWFGNVFN 409
Query: 474 ILEKFG 479
+L KFG
Sbjct: 410 VLPKFG 415
>sp|Q8XB33|TNAB_ECO57 Low affinity tryptophan permease OS=Escherichia coli O157:H7
GN=tnaB PE=3 SV=1
Length = 415
Score = 90.9 bits (224), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 110/426 (25%), Positives = 188/426 (44%), Gaps = 40/426 (9%)
Query: 81 NQATLKRESGSLSSAIFLVAGTTVGAGILAIPAVTQEAGFLASAVAVILCWIFMVVTGLL 140
+QA K S + ++AGT +G G+ A+P A F A +I+ W M+ +GLL
Sbjct: 3 DQAEKKH---SAFWGVMVIAGTVIGGGMFALPVDLAGAWFFWGAFILIIAWFSMLHSGLL 59
Query: 141 IAEVNVNTMCELGSGGVSLVSMAMRTIGTVGVQIASWSYIFIHYTLLVAYVARSSDILTN 200
+ E N+N G S ++ IG I+ + F+ Y L AY++ + I++
Sbjct: 60 LLEANLNYPV-----GSSFNTITKDLIGNTWNIISGITVAFVLYILTYAYISANGAIISE 114
Query: 201 FLGIPLWESAT---------LFSLILGGLCYFGSQRFIGAANGALVVGIIISFTALVFVA 251
+ + L A +F + + + R G ++ +I F + F+
Sbjct: 115 TISMNLGYHANPRIVGICTAIFVASVLWISSLAASRITSLFLGLKIISFVIVFGSFFFLV 174
Query: 252 SGDLQWNALLK----ANFEAVPMSIPIIALSFVYQNVVPVLCTNLEGNLSKVRTAIVVGT 307
+ +A + F + M++P+ SF + +P L K+ ++V G+
Sbjct: 175 DYSILRDATSSTAGTSYFPYIFMALPVCLASFGFHGNIPSLIICYGKRKDKLIKSVVFGS 234
Query: 308 SIPLGLFLVWNAVILGSISGLE----MSSGQIVDPIQQL---RSSNGAVGPIIDVFSFLA 360
+ L ++L W +G+I +SSG VD + + +G + + VFS LA
Sbjct: 235 LLALVIYLFWLYCTMGNIPRESFKAIISSGGNVDSLVKSFLGTKQHGIIEFCLLVFSNLA 294
Query: 361 IATSYIGFILGLSDFLADLLKLPSGQSSP-QPYLLTLIPPLVLSLLDPEIFFKALDFAGT 419
+A+S+ G LGL D+LADL K+ + + LLT +PP +L L+ P F + AG
Sbjct: 295 VASSFFGVTLGLFDYLADLFKIDNSHGGRFKTVLLTFLPPALLYLIFPNGFIYGIGGAGL 354
Query: 420 YGVLVLFGILPAVMSWSDRYSSSSPSMTIPRIVPGGKLTLSLVIGVAGYIILS------E 473
+ I+PAV++ R + T V GG L ++VI +IL
Sbjct: 355 CATIWAV-IIPAVLAIKARKKFPNQMFT----VWGGNLIPAIVILFGITVILCWFGNVFN 409
Query: 474 ILEKFG 479
+L KFG
Sbjct: 410 VLPKFG 415
>sp|P28785|TNAB_PROVU Low affinity tryptophan permease OS=Proteus vulgaris GN=tnaB PE=2
SV=1
Length = 417
Score = 80.9 bits (198), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 105/401 (26%), Positives = 178/401 (44%), Gaps = 43/401 (10%)
Query: 97 FLVAGTTVGAGILAIPAVTQEAGFLASAVAVILCWIFMVVTGLLIAEVNVNTMCELGSGG 156
F++ G +GAG+ ++P + A F+ S + + FM +G+ I E + + G+ G
Sbjct: 17 FVLGGAMIGAGMFSLPTIMSGAWFINSLFILFIVCFFMFHSGIYILE----CISKYGA-G 71
Query: 157 VSLVSMAMRTIGTVGVQIASWSYIFIHYTLLVAYVARSSDILTN---FLGIPLWESAT-- 211
+ ++ + IA+ S IF+ Y L+ AY++ + I+ GI A
Sbjct: 72 TNYFDISKELLPKWACYIANASLIFVLYILIYAYISAAGSIIYEASLLYGINFNLRAIFF 131
Query: 212 LFSLILGGLCYFG---SQRFIGAANGALVVGIIISFTALVFVASGDLQWNALL--KANFE 266
+F++ LG ++G + R +V I++F+ L F A GDL ++A K+
Sbjct: 132 IFTIALGATIWWGGACASRLTSIFLFIKIVLFILAFSGLFFKAKGDLLFSATFAGKSQLY 191
Query: 267 AVP---MSIPIIALSFVYQNVVPVLCTNLEGNLSKVRTAIVVGTSIPLGLFLVWNAVILG 323
P + IP SF Y V L N KV + ++G + L ++L+W ++G
Sbjct: 192 LYPFIFIIIPYAITSFGYHGNVCSLYKLYNQNERKVVKSCIIGCLLALVIYLLW---MIG 248
Query: 324 SISGLEMSSGQIVDPIQQLRSSNGAVGPIIDV------------FSFLAIATSYIGFILG 371
++ L Q + IQ+ + + + + V FS A+ S++G +G
Sbjct: 249 TMGNLPRE--QFITIIQKGGNLDAFIDSLYTVLNSKYIEGFLLWFSISAVFCSFLGVAIG 306
Query: 372 LSDFLADLLKLPSGQSSP-QPYLLTLIPPLVLSLLDPEIFFKALDFAGTYGVLVLFGILP 430
L D++ LK ++ + +L PPL+L L P F A+ +AGT V I P
Sbjct: 307 LFDYILASLKFKDNKTGRLKSGVLCFTPPLLLCLFFPNGFLIAIAYAGT-AACVWAIICP 365
Query: 431 AVMSWSDRYSSSSPSMTIPRIVPGGKLTLSLVI--GVAGYI 469
AVM+ R + V GGK + VI GV G I
Sbjct: 366 AVMALKARQKFPNSGFK----VWGGKKLIYAVIAFGVVGII 402
>sp|Q6DEL1|S38A7_DANRE Putative sodium-coupled neutral amino acid transporter 7 OS=Danio
rerio GN=slc38a7 PE=2 SV=1
Length = 465
Score = 37.7 bits (86), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 51/101 (50%), Gaps = 12/101 (11%)
Query: 81 NQATLKRESGSLSSAIFLVAGTTVGAGILAIPAVTQEAGFLASAVAVILCWIFMVVTGLL 140
+Q+ R S A+F+V +GAG+L PA AG + + V + +C + ++TGL+
Sbjct: 40 SQSDDSRGGTSSLGAVFIVVNAALGAGLLNFPAAFNMAGGITAGVTLQMCMMAFIITGLV 99
Query: 141 I----AEVN--------VNTMCELGSGGVSLVSMAMRTIGT 169
I ++V+ V +C G + +++A+ T GT
Sbjct: 100 ILAYCSQVSNESTYQEVVRAVCGKALGVICELAIAVYTFGT 140
>sp|Q6DFE7|S38A7_XENLA Putative sodium-coupled neutral amino acid transporter 7 OS=Xenopus
laevis GN=slc38a7 PE=2 SV=1
Length = 452
Score = 35.8 bits (81), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 50/99 (50%), Gaps = 14/99 (14%)
Query: 85 LKRESGSLS--SAIFLVAGTTVGAGILAIPAVTQEAGFLASAVAVILCWIFMVVTGLLI- 141
L+R +G S A+F+V +GAG+L PA AG + +A+++ L + +++GL+I
Sbjct: 34 LRRLAGGTSPAGAVFIVVNAALGAGLLNFPAAFNAAGGITAAISLQLVLLLFIISGLVIL 93
Query: 142 -----------AEVNVNTMCELGSGGVSLVSMAMRTIGT 169
+ V +C +G + V +A+ T GT
Sbjct: 94 AHCADACSERTYQEVVRGVCGRTAGVLCEVLIAVYTFGT 132
>sp|Q9NVC3|S38A7_HUMAN Putative sodium-coupled neutral amino acid transporter 7 OS=Homo
sapiens GN=SLC38A7 PE=2 SV=1
Length = 462
Score = 35.4 bits (80), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 34/57 (59%)
Query: 85 LKRESGSLSSAIFLVAGTTVGAGILAIPAVTQEAGFLASAVAVILCWIFMVVTGLLI 141
L R + S AIF+V +GAG+L PA AG +A+ +A+ + + +++GL+I
Sbjct: 46 LDRGTTSTLGAIFIVVNACLGAGLLNFPAAFSTAGGVAAGIALQMGMLVFIISGLVI 102
>sp|Q5R9F5|S38A7_PONAB Putative sodium-coupled neutral amino acid transporter 7 OS=Pongo
abelii GN=SLC38A7 PE=2 SV=1
Length = 462
Score = 33.9 bits (76), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 33/56 (58%)
Query: 86 KRESGSLSSAIFLVAGTTVGAGILAIPAVTQEAGFLASAVAVILCWIFMVVTGLLI 141
R + S AIF+V +GAG+L PA AG +A+ +A+ + + +++GL+I
Sbjct: 47 DRGTTSTLGAIFIVVNACLGAGLLNFPAAFSTAGGVAAGIALQMGMLVFIISGLVI 102
>sp|Q6JWR2|S38A7_RAT Putative sodium-coupled neutral amino acid transporter 7 OS=Rattus
norvegicus GN=Slc38a7 PE=2 SV=1
Length = 463
Score = 33.9 bits (76), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 36/56 (64%), Gaps = 2/56 (3%)
Query: 88 ESGSLSS--AIFLVAGTTVGAGILAIPAVTQEAGFLASAVAVILCWIFMVVTGLLI 141
+SG+ S+ A+F+V +GAG+L PA AG +A+ +A+ + + +++GL+I
Sbjct: 47 DSGTTSTLGAVFIVVNACLGAGLLNFPAAFSTAGGVAAGIALQMGMLVFIISGLVI 102
>sp|Q8BWH0|S38A7_MOUSE Putative sodium-coupled neutral amino acid transporter 7 OS=Mus
musculus GN=Slc38a7 PE=1 SV=1
Length = 463
Score = 33.5 bits (75), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 36/56 (64%), Gaps = 2/56 (3%)
Query: 88 ESGSLSS--AIFLVAGTTVGAGILAIPAVTQEAGFLASAVAVILCWIFMVVTGLLI 141
+SG+ S+ A+F+V +GAG+L PA AG +A+ +A+ + + +++GL+I
Sbjct: 47 DSGTTSTLGAVFIVVNACLGAGLLNFPAAFSTAGGVAAGIALQMGMLVFIISGLVI 102
>sp|Q17QG5|UB2G2_BOVIN Ubiquitin-conjugating enzyme E2 G2 OS=Bos taurus GN=UBE2G2 PE=2
SV=1
Length = 165
Score = 32.7 bits (73), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 39/79 (49%), Gaps = 11/79 (13%)
Query: 394 LTLIPP--LVLSLLDPEIFFK--ALDFAGTYGVLVLFGILPAVMSWSDRYSSSSPSMTI- 448
LTL PP +V ++ E FF+ AL G FG+ PA++S+ Y S P M
Sbjct: 16 LTLNPPEGIVAGPMNEENFFEWEAL-IMGPEDTCFEFGVFPAILSFPLDYPLSPPKMRFT 74
Query: 449 -----PRIVPGGKLTLSLV 462
P I P G++ +S++
Sbjct: 75 CEMFHPNIYPDGRVCISIL 93
>sp|Q5RF84|UB2G2_PONAB Ubiquitin-conjugating enzyme E2 G2 OS=Pongo abelii GN=UBE2G2 PE=2
SV=1
Length = 165
Score = 32.7 bits (73), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 39/79 (49%), Gaps = 11/79 (13%)
Query: 394 LTLIPP--LVLSLLDPEIFFK--ALDFAGTYGVLVLFGILPAVMSWSDRYSSSSPSMTI- 448
LTL PP +V ++ E FF+ AL G FG+ PA++S+ Y S P M
Sbjct: 16 LTLNPPEGIVAGPMNEENFFEWEAL-IMGPEDTCFEFGVFPAILSFPLDYPLSPPKMRFT 74
Query: 449 -----PRIVPGGKLTLSLV 462
P I P G++ +S++
Sbjct: 75 CEMFHPNIYPDGRVCISIL 93
>sp|P60605|UB2G2_MOUSE Ubiquitin-conjugating enzyme E2 G2 OS=Mus musculus GN=Ube2g2 PE=1
SV=1
Length = 165
Score = 32.7 bits (73), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 39/79 (49%), Gaps = 11/79 (13%)
Query: 394 LTLIPP--LVLSLLDPEIFFK--ALDFAGTYGVLVLFGILPAVMSWSDRYSSSSPSMTI- 448
LTL PP +V ++ E FF+ AL G FG+ PA++S+ Y S P M
Sbjct: 16 LTLNPPEGIVAGPMNEENFFEWEAL-IMGPEDTCFEFGVFPAILSFPLDYPLSPPKMRFT 74
Query: 449 -----PRIVPGGKLTLSLV 462
P I P G++ +S++
Sbjct: 75 CEMFHPNIYPDGRVCISIL 93
>sp|P60604|UB2G2_HUMAN Ubiquitin-conjugating enzyme E2 G2 OS=Homo sapiens GN=UBE2G2 PE=1
SV=1
Length = 165
Score = 32.7 bits (73), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 39/79 (49%), Gaps = 11/79 (13%)
Query: 394 LTLIPP--LVLSLLDPEIFFK--ALDFAGTYGVLVLFGILPAVMSWSDRYSSSSPSMTI- 448
LTL PP +V ++ E FF+ AL G FG+ PA++S+ Y S P M
Sbjct: 16 LTLNPPEGIVAGPMNEENFFEWEAL-IMGPEDTCFEFGVFPAILSFPLDYPLSPPKMRFT 74
Query: 449 -----PRIVPGGKLTLSLV 462
P I P G++ +S++
Sbjct: 75 CEMFHPNIYPDGRVCISIL 93
>sp|P44768|POTE_HAEIN Putrescine-ornithine antiporter OS=Haemophilus influenzae (strain
ATCC 51907 / DSM 11121 / KW20 / Rd) GN=potE PE=3 SV=1
Length = 435
Score = 32.3 bits (72), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 102/244 (41%), Gaps = 25/244 (10%)
Query: 104 VGAGILAIPAVTQEAGFLASAVAVILCWIFMVVTGLLIAEVNVNT-MCELGSGGVSLVSM 162
+G+GI+ +P E G ++ I+ W+ V +A M SGG+
Sbjct: 22 MGSGIIMLPTKLAEIGTIS-----IVSWLVTAVGSTALAYAFAQCGMFSKKSGGMG--GY 74
Query: 163 AMRTIGTVGVQIASWSY----IFIHYTLLVAYVARSSDILTNFLG---IPLWESATLFSL 215
A + G G +A+++Y + + + ++ V S++ L I LW T+F+L
Sbjct: 75 AEYSFGKAGNFMANYTYGVSLVIANTAIAISAVGYGSELFGTILSPLSIALW---TIFTL 131
Query: 216 ILGGLCYFGSQRFIGAANGALVVGIIISFTALVFVA----SGDL---QWNALLKANFEAV 268
L + FG R G + + G+II + + G + WN FEA+
Sbjct: 132 WLATVLNFGGARITGNISSFTIWGVIIPVVGISIIGWKWFDGSMYVNSWNPHNVPTFEAI 191
Query: 269 PMSIPIIALSFVYQNVVPVLCTNLEGNLSKVRTAIVVGTSIPLGLFLVWNAVILGSISGL 328
+SI + +F+ +E V A++ GT +++V VI G + L
Sbjct: 192 GVSISMTLWAFLGLESACANADAVENPEKNVPIAVLGGTLGAAVIYIVSTNVIAGIVPNL 251
Query: 329 EMSS 332
E+++
Sbjct: 252 ELAN 255
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.138 0.402
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 164,663,261
Number of Sequences: 539616
Number of extensions: 6770553
Number of successful extensions: 19514
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 43
Number of HSP's that attempted gapping in prelim test: 19438
Number of HSP's gapped (non-prelim): 67
length of query: 481
length of database: 191,569,459
effective HSP length: 121
effective length of query: 360
effective length of database: 126,275,923
effective search space: 45459332280
effective search space used: 45459332280
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 63 (28.9 bits)