BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 044162
(369 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q00IB6|CPL4_ARATH RNA polymerase II C-terminal domain phosphatase-like 4
OS=Arabidopsis thaliana GN=CPL4 PE=1 SV=1
Length = 440
Score = 260 bits (664), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 144/339 (42%), Positives = 207/339 (61%), Gaps = 15/339 (4%)
Query: 38 CPHATILNGMCVVCDKLMDDSYGLCFDYIEKGLRYSIDEISRLKKRNTKNLLRMRKLHLV 97
C H MC VC + ++++ G+ F YI K +R + DEISRL+ +++ L R RKL+LV
Sbjct: 68 CEHPGSFGNMCFVCGQKLEET-GVSFRYIHKEMRLNEDEISRLRDSDSRFLQRQRKLYLV 126
Query: 98 LDLDHTLLHSRLIGKLTSDEKYLEKAAAAAGEFSSDKISRGNDLFKIKIGDNVLLVKLRP 157
LDLDHTLL++ ++ L +E+YL+ + + + G LF ++ ++ KLRP
Sbjct: 127 LDLDHTLLNTTILRDLKPEEEYLKSHTHSLQDGCN---VSGGSLFLLEFMQ--MMTKLRP 181
Query: 158 FVRSFLEEASRLFEISVCTLGNREYATRAVKLLDPDCKYFNSRIITREDFKQKERKYLDL 217
FV SFL+EAS +F + + T+G+R YA + KLLDP +YF R+I+R+D + K LD+
Sbjct: 182 FVHSFLKEASEMFVMYIYTMGDRNYARQMAKLLDPKGEYFGDRVISRDDGTVRHEKSLDV 241
Query: 218 VLGQENSIVIVDDTESVWGGRVENLITVGSYDFFKDKKK---NDCKSYSEQMSDESESDG 274
VLGQE++++I+DDTE+ W +NLI + Y FF + + KS SE SDESE DG
Sbjct: 242 VLGQESAVLILDDTENAWPKHKDNLIVIERYHFFSSSCRQFDHRYKSLSELKSDESEPDG 301
Query: 275 ALANILRALKAVHALYFDNPGNHAAGRDVRSCLAKIRSRILMGCTILFG-----DDDFEE 329
ALA +L+ LK HAL+F+N + RDVR L ++R IL GC I+F E+
Sbjct: 302 ALATVLKVLKQAHALFFENVDEGISNRDVRLMLKQVRKEILKGCKIVFSRVFPTKAKPED 361
Query: 330 LPLTWSRAEEMGAICTLVTDASVTHVVSSNTQSETFEWA 368
PL W AEE+GA C DASVTHVV+ + +E WA
Sbjct: 362 HPL-WKMAEELGATCATEVDASVTHVVAMDVGTEKARWA 399
>sp|Q8LL04|CPL3_ARATH RNA polymerase II C-terminal domain phosphatase-like 3 OS=Arabidopsis
thaliana GN=CPL3 PE=1 SV=2
Length = 1241
Score = 147 bits (371), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 109/314 (34%), Positives = 167/314 (53%), Gaps = 35/314 (11%)
Query: 75 DEISRLKKRNTKNLLRMRKLHLVLDLDHTLLHSRLIGKLTSDEKYLEKAAAAAGEFSSDK 134
+ + RL+++N + +KL LVLD+DHTLL+S K E E+ E +K
Sbjct: 911 ERVRRLEEQN--KMFASQKLSLVLDIDHTLLNS---AKFNEVESRHEEILRKKEEQDREK 965
Query: 135 ISRGNDLFK-IKIGDNVLLVKLRPFVRSFLEEASRLFEISVCTLGNREYATRAVKLLDPD 193
R LF+ + +G + KLRP + +FLE+AS+L+E+ + T+GN+ YAT KLLDP
Sbjct: 966 PYR--HLFRFLHMG---MWTKLRPGIWNFLEKASKLYELHLYTMGNKLYATEMAKLLDPK 1020
Query: 194 CKYFNSRIITREDF--------KQKERKYLDLVLGQENSIVIVDDTESVWGGRVENLITV 245
FN R+I++ D + + K L+ V+G E+S+VI+DD+ VW NLI V
Sbjct: 1021 GVLFNGRVISKGDDGDPLDGDERVPKSKDLEGVMGMESSVVIIDDSVRVWPQHKMNLIAV 1080
Query: 246 GSYDFFKDKKKND---CKSYSEQMSDESESDGALANILRALKAVHALYFDNPGNHAA--G 300
Y +F ++ S E DE +G LA+ L ++ +H +F +H +
Sbjct: 1081 ERYLYFPCSRRQFGLLGPSLLELDRDEVPEEGTLASSLAVIEKIHQNFF----SHTSLDE 1136
Query: 301 RDVRSCLAKIRSRILMGCTILF------GDDDFEELPLTWSRAEEMGAICTLVTDASVTH 354
DVR+ LA + +IL GC I+F G+ PL W AE+ GA+CT D VTH
Sbjct: 1137 VDVRNILASEQRKILAGCRIVFSRIIPVGEAKPHLHPL-WQTAEQFGAVCTTQVDEHVTH 1195
Query: 355 VVSSNTQSETFEWA 368
VV+++ ++ WA
Sbjct: 1196 VVTNSLGTDKVNWA 1209
>sp|Q9P376|FCP1_SCHPO RNA polymerase II subunit A C-terminal domain phosphatase
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=fcp1 PE=1 SV=1
Length = 723
Score = 99.0 bits (245), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 117/239 (48%), Gaps = 30/239 (12%)
Query: 31 VSEEHTICPHATILNGMCVVCDKLMDDSYGLCFDYIEKG----------LRYSIDEISRL 80
V++ H C H G+C +C K + + + + + L S++E SRL
Sbjct: 92 VAKLHEPCTHEVNYGGLCAICGKNITSQDYMGYSDMARANISMTHNTGDLTVSLEEASRL 151
Query: 81 KKRNTKNLLRMRKLHLVLDLDHTLLHSRL---IGKLTSDEKYLEKAAAAAGEFSSDKISR 137
+ N K L + ++L L++DLD T++H+ + +G+ SD G + D + R
Sbjct: 152 ESENVKRLRQEKRLSLIVDLDQTIIHATVDPTVGEWMSD----------PGNVNYD-VLR 200
Query: 138 GNDLFKIKIGDN----VLLVKLRPFVRSFLEEASRLFEISVCTLGNREYATRAVKLLDPD 193
F ++ G + +K RP + FL++ S L+E+ + T+G + YA K++DP
Sbjct: 201 DVRSFNLQEGPSGYTSCYYIKFRPGLAQFLQKISELYELHIYTMGTKAYAKEVAKIIDPT 260
Query: 194 CKYFNSRIITREDFKQKERKYLDLVLGQENS-IVIVDDTESVWGGRVENLITVGSYDFF 251
K F R+++R+D +K L + + S +V++DD VW NLI V Y+FF
Sbjct: 261 GKLFQDRVLSRDDSGSLAQKSLRRLFPCDTSMVVVIDDRGDVWDWN-PNLIKVVPYEFF 318
Score = 35.8 bits (81), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 49/109 (44%), Gaps = 16/109 (14%)
Query: 273 DGALANILRALKAVHALYFDN-------PGNHAAGRDVRSCLAKIRSRILMGCTILF--- 322
D L + + LK +HA+Y++ GNH +V + K++ ++L GC +LF
Sbjct: 443 DHELERLEKVLKDIHAVYYEEENDISSRSGNHKHA-NVGLIIPKMKQKVLKGCRLLFSGV 501
Query: 323 ---GDDDFEELPLTWSRAEEMGAICTLVTDASVTHVVSSNTQSETFEWA 368
G D W+ + GA L TH++++ ++E + A
Sbjct: 502 IPLGVDVLSSDIAKWAMS--FGAEVVLDFSVPPTHLIAAKIRTEKVKKA 548
>sp|Q8SV03|FCP1_ENCCU RNA polymerase II subunit A C-terminal domain phosphatase
OS=Encephalitozoon cuniculi (strain GB-M1) GN=FCP1 PE=1
SV=1
Length = 411
Score = 94.0 bits (232), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/251 (29%), Positives = 116/251 (46%), Gaps = 27/251 (10%)
Query: 38 CPHATILNGMCVVCD-KLMDDSYGLCFDYIEKGLRYSIDEISRLKKRNTKNLLRMRKLHL 96
C H L +C VC ++ ++S+ C Y ++ + +E + K + L KL L
Sbjct: 4 CNHPIRLGTLCGVCGMEIQEESHLFCALYNTDNVKITHEEAVAIHKEKMEALEMQMKLIL 63
Query: 97 VLDLDHTLLHSRLIGKLTSDEKYLEKAAAAAGEFSSDKISRGNDLFKIKIGDNVLLVKLR 156
VLDLD T+LH+ Y + +F D+ VKLR
Sbjct: 64 VLDLDQTVLHT----------TYGTSSLEGTVKFVIDRCR--------------YCVKLR 99
Query: 157 PFVRSFLEEASRLFEISVCTLGNREYATRAVKLLDPDCKYFNSRIITREDFKQKERKYLD 216
P + L S+L+EI V T+G R YA R V+++DP KYF+ RIITR++ + K L
Sbjct: 100 PNLDYMLRRISKLYEIHVYTMGTRAYAERIVEIIDPSGKYFDDRIITRDENQGVLVKRLS 159
Query: 217 LVLGQEN-SIVIVDDTESVWGGRVENLITVGSYDFFKDKKKNDCKSYSEQMSDESESDGA 275
+ ++ +IVI+DD VW ENL+ + + +F ND ++ E+ + A
Sbjct: 160 RLFPHDHRNIVILDDRPDVW-DYCENLVLIRPFWYFNRVDINDPLRLKRKIEKEAGENKA 218
Query: 276 LANILRALKAV 286
L + K +
Sbjct: 219 LEEFVSKRKKI 229
>sp|Q9Y5B0|CTDP1_HUMAN RNA polymerase II subunit A C-terminal domain phosphatase OS=Homo
sapiens GN=CTDP1 PE=1 SV=3
Length = 961
Score = 90.5 bits (223), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 112/233 (48%), Gaps = 40/233 (17%)
Query: 38 CPHATILNGMCVVCDK---------------LMDDSYGLCFDYIEKGLRYSIDEISRLKK 82
C H ++ G+C C + L + + E L S ++ +L +
Sbjct: 114 CSHPVVMKGLCAECGQDLTQLQSKNGKQQVPLSTATVSMVHSVPE--LMVSSEQAEQLGR 171
Query: 83 RNTKNLLRMRKLHLVLDLDHTLLHSRLIGKLTSDEKYLEKAAAAAGEFSSDKISRGNDLF 142
+ + L R RKL L++DLD TL+H+ E++ ++ + ++G F
Sbjct: 172 EDQQRLHRNRKLVLMVDLDQTLIHT--------TEQHCQQMS-----------NKGIFHF 212
Query: 143 KIKIGDNVLLVKLRPFVRSFLEEASRLFEISVCTLGNREYATRAVKLLDPDCKYFNSRII 202
++ G+ +L +LRP + FLE+ ++L+E+ V T G+R YA LDP+ K F+ RI+
Sbjct: 213 QLGRGEPMLHTRLRPHCKDFLEKIAKLYELHVFTFGSRLYAHTIAGFLDPEKKLFSHRIL 272
Query: 203 TRE---DFKQKERKYLDLVLGQENSIVIVDDTESVWGGRVENLITVGSYDFFK 252
+R+ D K +L ++ + I+DD E VW NLITV Y +F+
Sbjct: 273 SRDECIDPFSKTGNLRNLFPCGDSMVCIIDDREDVW-KFAPNLITVKKYVYFQ 324
>sp|Q7TSG2|CTDP1_MOUSE RNA polymerase II subunit A C-terminal domain phosphatase OS=Mus
musculus GN=Ctdp1 PE=1 SV=1
Length = 960
Score = 89.7 bits (221), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 110/233 (47%), Gaps = 40/233 (17%)
Query: 38 CPHATILNGMCVVCDK---------------LMDDSYGLCFDYIEKGLRYSIDEISRLKK 82
C H ++ G+C C + L + + E L S ++ +L +
Sbjct: 114 CSHPVVMKGLCAECGQDLTQLQSKNGRQQVPLSTATVSMVHSVPE--LMVSSEQAEKLGR 171
Query: 83 RNTKNLLRMRKLHLVLDLDHTLLHSRLIGKLTSDEKYLEKAAAAAGEFSSDKISRGNDLF 142
+ + L R RKL L++DLD TL+H+ E++ + + ++G F
Sbjct: 172 EDQQRLHRNRKLVLMVDLDQTLIHT--------TEQHCPQMS-----------NKGIFHF 212
Query: 143 KIKIGDNVLLVKLRPFVRSFLEEASRLFEISVCTLGNREYATRAVKLLDPDCKYFNSRII 202
++ G+ +L +LRP + FLE+ ++L+E+ V T G+R YA LDP+ K F+ RI+
Sbjct: 213 QLGRGEPMLHTRLRPHCKDFLEKIAKLYELHVFTFGSRLYAHTIAGFLDPEKKLFSHRIL 272
Query: 203 TRE---DFKQKERKYLDLVLGQENSIVIVDDTESVWGGRVENLITVGSYDFFK 252
+R+ D K +L ++ + I+DD E VW NLITV Y +F
Sbjct: 273 SRDECIDPFSKTGNLRNLFPCGDSMVCIIDDREDVW-KFAPNLITVKKYVYFP 324
>sp|Q03254|FCP1_YEAST RNA polymerase II subunit A C-terminal domain phosphatase
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=FCP1 PE=1 SV=1
Length = 732
Score = 77.0 bits (188), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 110/234 (47%), Gaps = 24/234 (10%)
Query: 38 CPHATILNGMCVVCDKLMD-DSY-GLCFDYI-EKGLRYSIDEISRLKKRNTKNLLRMRKL 94
C H + G+C C K + D++ G+ D + + L+ S E R K ++L R +KL
Sbjct: 116 CNHDIVYGGLCTQCGKEVSADAFDGVPLDVVGDVDLQISETEAIRTGKALKEHLRRDKKL 175
Query: 95 HLVLDLDHTLLH---SRLIGKLTSDEK-------------YLEKAAAAAGEFSSDKISRG 138
LV+DLD T++H I + +D L++ + +D G
Sbjct: 176 ILVVDLDQTIIHCGVDPTIAEWKNDPNNPNFETLRDVKSFTLDEELVLPLMYMNDD---G 232
Query: 139 NDLFKIKIGDNVLLVKLRPFVRSFLEEASRLFEISVCTLGNREYATRAVKLLDPDCKYFN 198
+ L + VK+RP ++ F + + LFE+ + T+ R YA + K++DP + F
Sbjct: 233 SMLRPPPVRKCWYYVKVRPGLKEFFAKVAPLFEMHIYTMATRAYALQIAKIVDPTGELFG 292
Query: 199 SRIITREDFKQKERKYLDLVLGQENS-IVIVDDTESVWGGRVENLITVGSYDFF 251
RI++R++ K L + + S +V++DD VW NLI V Y+FF
Sbjct: 293 DRILSRDENGSLTTKSLAKLFPTDQSMVVVIDDRGDVWNW-CPNLIKVVPYNFF 345
>sp|Q08BB5|CTL2A_DANRE CTD small phosphatase-like protein 2-A OS=Danio rerio GN=ctdspl2a
PE=2 SV=1
Length = 469
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 87/182 (47%), Gaps = 33/182 (18%)
Query: 80 LKKRNTKNLLRMRKLHLVLDLDHTLLHSRLIGKLTSDEKYLEKAAAAAGEFSSDKISRGN 139
LK R+T + LVLDLD TL+H L LE AA D I +
Sbjct: 283 LKTRSTP------EFSLVLDLDETLVHCSL--------NELEDAALTFPVLFQDVIYQ-- 326
Query: 140 DLFKIKIGDNVLLVKLRPFVRSFLEEASRLFEISVCTLGNREYATRAVKLLDPDCKYFNS 199
+ V+LRPF R FLE S+++EI + T + YA + + +LDP +
Sbjct: 327 -----------VYVRLRPFFREFLERMSQIYEIILFTASKKVYADKLLNILDPKKQLVRH 375
Query: 200 RIITREDFKQKERKYL-DL-VLGQE-NSIVIVDDTESVWGGRVENLITVGSYDFFKDKKK 256
R+ RE + Y+ DL +LG++ + VI+D++ + ++ N I + S+ F DK
Sbjct: 376 RLF-REHCVCVQGNYIKDLNILGRDLSKTVIIDNSPQAFAYQLSNGIPIESW--FVDKND 432
Query: 257 ND 258
N+
Sbjct: 433 NE 434
>sp|Q5XIK8|CTSL2_RAT CTD small phosphatase-like protein 2 OS=Rattus norvegicus
GN=Ctdspl2 PE=2 SV=1
Length = 465
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 87/182 (47%), Gaps = 33/182 (18%)
Query: 80 LKKRNTKNLLRMRKLHLVLDLDHTLLHSRLIGKLTSDEKYLEKAAAAAGEFSSDKISRGN 139
LK R+T + LVLDLD TL+H L LE AA D I +
Sbjct: 279 LKTRSTP------EFSLVLDLDETLVHCSL--------NELEDAALTFPVLFQDVIYQ-- 322
Query: 140 DLFKIKIGDNVLLVKLRPFVRSFLEEASRLFEISVCTLGNREYATRAVKLLDPDCKYFNS 199
+ V+LRPF R FLE S+++EI + T + YA + + +LDP +
Sbjct: 323 -----------VYVRLRPFFREFLERMSQMYEIILFTASKKVYADKLLNILDPKKQLVRH 371
Query: 200 RIITREDFKQKERKYL-DL-VLGQE-NSIVIVDDTESVWGGRVENLITVGSYDFFKDKKK 256
R+ RE + Y+ DL +LG++ + +I+D++ + ++ N I + S+ F DK
Sbjct: 372 RLF-REHCVCVQGNYIKDLNILGRDLSKTIIIDNSPQAFAYQLSNGIPIESW--FMDKND 428
Query: 257 ND 258
N+
Sbjct: 429 NE 430
>sp|Q8BG15|CTSL2_MOUSE CTD small phosphatase-like protein 2 OS=Mus musculus GN=Ctdspl2
PE=1 SV=1
Length = 465
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 87/182 (47%), Gaps = 33/182 (18%)
Query: 80 LKKRNTKNLLRMRKLHLVLDLDHTLLHSRLIGKLTSDEKYLEKAAAAAGEFSSDKISRGN 139
LK R+T + LVLDLD TL+H L LE AA D I +
Sbjct: 279 LKTRSTP------EFSLVLDLDETLVHCSL--------NELEDAALTFPVLFQDVIYQ-- 322
Query: 140 DLFKIKIGDNVLLVKLRPFVRSFLEEASRLFEISVCTLGNREYATRAVKLLDPDCKYFNS 199
+ V+LRPF R FLE S+++EI + T + YA + + +LDP +
Sbjct: 323 -----------VYVRLRPFFREFLERMSQMYEIILFTASKKVYADKLLNILDPKKQLVRH 371
Query: 200 RIITREDFKQKERKYL-DL-VLGQE-NSIVIVDDTESVWGGRVENLITVGSYDFFKDKKK 256
R+ RE + Y+ DL +LG++ + +I+D++ + ++ N I + S+ F DK
Sbjct: 372 RLF-REHCVCVQGNYIKDLNILGRDLSKTIIIDNSPQAFAYQLSNGIPIESW--FMDKND 428
Query: 257 ND 258
N+
Sbjct: 429 NE 430
>sp|Q5F3Z7|CTSL2_CHICK CTD small phosphatase-like protein 2 OS=Gallus gallus GN=CTDSPL2
PE=2 SV=2
Length = 466
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 87/182 (47%), Gaps = 33/182 (18%)
Query: 80 LKKRNTKNLLRMRKLHLVLDLDHTLLHSRLIGKLTSDEKYLEKAAAAAGEFSSDKISRGN 139
LK R+T + LVLDLD TL+H L LE AA D I +
Sbjct: 280 LKTRSTP------EFSLVLDLDETLVHCSL--------NELEDAALTFPVLFQDVIYQ-- 323
Query: 140 DLFKIKIGDNVLLVKLRPFVRSFLEEASRLFEISVCTLGNREYATRAVKLLDPDCKYFNS 199
+ V+LRPF R FLE S+++EI + T + YA + + +LDP +
Sbjct: 324 -----------VYVRLRPFFREFLERMSQIYEIILFTASKKVYADKLLNILDPKKQLVRH 372
Query: 200 RIITREDFKQKERKYL-DL-VLGQE-NSIVIVDDTESVWGGRVENLITVGSYDFFKDKKK 256
R+ RE + Y+ DL +LG++ + +I+D++ + ++ N I + S+ F DK
Sbjct: 373 RLF-REHCVCVQGNYIKDLNILGRDLSKTIIIDNSPQAFAYQLSNGIPIESW--FMDKND 429
Query: 257 ND 258
N+
Sbjct: 430 NE 431
>sp|Q05D32|CTSL2_HUMAN CTD small phosphatase-like protein 2 OS=Homo sapiens GN=CTDSPL2
PE=1 SV=2
Length = 466
Score = 56.6 bits (135), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 87/182 (47%), Gaps = 33/182 (18%)
Query: 80 LKKRNTKNLLRMRKLHLVLDLDHTLLHSRLIGKLTSDEKYLEKAAAAAGEFSSDKISRGN 139
LK R+T + LVLDLD TL+H L LE AA D I +
Sbjct: 280 LKTRSTP------EFSLVLDLDETLVHCSL--------NELEDAALTFPVLFQDVIYQ-- 323
Query: 140 DLFKIKIGDNVLLVKLRPFVRSFLEEASRLFEISVCTLGNREYATRAVKLLDPDCKYFNS 199
+ V+LRPF R FLE S+++EI + T + YA + + +LDP +
Sbjct: 324 -----------VYVRLRPFFREFLERMSQMYEIILFTASKKVYADKLLNILDPKKQLVRH 372
Query: 200 RIITREDFKQKERKYL-DL-VLGQE-NSIVIVDDTESVWGGRVENLITVGSYDFFKDKKK 256
R+ RE + Y+ DL +LG++ + +I+D++ + ++ N I + S+ F DK
Sbjct: 373 RLF-REHCVCVQGNYIKDLNILGRDLSKTIIIDNSPQAFAYQLSNGIPIESW--FMDKND 429
Query: 257 ND 258
N+
Sbjct: 430 NE 431
>sp|Q3KQB6|CTL2B_XENLA CTD small phosphatase-like protein 2-B OS=Xenopus laevis
GN=ctdspl2-b PE=2 SV=1
Length = 466
Score = 55.8 bits (133), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 85/178 (47%), Gaps = 33/178 (18%)
Query: 80 LKKRNTKNLLRMRKLHLVLDLDHTLLHSRLIGKLTSDEKYLEKAAAAAGEFSSDKISRGN 139
LK R+T + LVLDLD TL+H L LE AA D I +
Sbjct: 280 LKTRSTP------EFSLVLDLDETLVHCSL--------NELEDAALTFPVLFQDVIYQ-- 323
Query: 140 DLFKIKIGDNVLLVKLRPFVRSFLEEASRLFEISVCTLGNREYATRAVKLLDPDCKYFNS 199
+ V+LRPF R FLE S+++EI + T + YA + + +LDP +
Sbjct: 324 -----------VYVRLRPFFREFLERMSQIYEIILFTASKKVYADKLLNILDPKKRLVRH 372
Query: 200 RIITREDFKQKERKYL-DL-VLGQE-NSIVIVDDTESVWGGRVENLITVGSYDFFKDK 254
R+ RE + Y+ DL +LG++ + +I+D++ + ++ N I + S+ F DK
Sbjct: 373 RLF-REHCVCVQGNYIKDLNILGRDLSKTIIIDNSPQAFAYQLSNGIPIESW--FMDK 427
>sp|Q801R4|CTL2A_XENLA CTD small phosphatase-like protein 2-A OS=Xenopus laevis
GN=ctdspl2-a PE=2 SV=1
Length = 466
Score = 55.8 bits (133), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 85/178 (47%), Gaps = 33/178 (18%)
Query: 80 LKKRNTKNLLRMRKLHLVLDLDHTLLHSRLIGKLTSDEKYLEKAAAAAGEFSSDKISRGN 139
LK R+T + LVLDLD TL+H L LE AA D I +
Sbjct: 280 LKTRSTP------EFSLVLDLDETLVHCSL--------NELEDAALTFPVLFQDVIYQ-- 323
Query: 140 DLFKIKIGDNVLLVKLRPFVRSFLEEASRLFEISVCTLGNREYATRAVKLLDPDCKYFNS 199
+ V+LRPF R FLE S+++EI + T + YA + + +LDP +
Sbjct: 324 -----------VYVRLRPFFREFLERMSQIYEIILFTASKKVYADKLLNILDPKKRLVRH 372
Query: 200 RIITREDFKQKERKYL-DL-VLGQE-NSIVIVDDTESVWGGRVENLITVGSYDFFKDK 254
R+ RE + Y+ DL +LG++ + +I+D++ + ++ N I + S+ F DK
Sbjct: 373 RLF-REHCVCVQGNYIKDLNILGRDLSKTIIIDNSPQAFAYQLSNGIPIESW--FMDK 427
>sp|Q66KM5|CTSL2_XENTR CTD small phosphatase-like protein 2 OS=Xenopus tropicalis
GN=ctdspl2 PE=2 SV=1
Length = 466
Score = 55.5 bits (132), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 85/178 (47%), Gaps = 33/178 (18%)
Query: 80 LKKRNTKNLLRMRKLHLVLDLDHTLLHSRLIGKLTSDEKYLEKAAAAAGEFSSDKISRGN 139
LK R+T + LVLDLD TL+H L LE AA D I +
Sbjct: 280 LKTRSTP------EFSLVLDLDETLVHCSL--------NELEDAALTFPVLFQDVIYQ-- 323
Query: 140 DLFKIKIGDNVLLVKLRPFVRSFLEEASRLFEISVCTLGNREYATRAVKLLDPDCKYFNS 199
+ V+LRPF R FLE S+++EI + T + YA + + +LDP +
Sbjct: 324 -----------VYVRLRPFFREFLERMSQIYEIILFTASKKVYADKLLNILDPKKRLVRH 372
Query: 200 RIITREDFKQKERKYL-DL-VLGQE-NSIVIVDDTESVWGGRVENLITVGSYDFFKDK 254
R+ RE + Y+ DL +LG++ + +I+D++ + ++ N I + S+ F DK
Sbjct: 373 RLF-REHCVCVQGNYIKDLNILGRDLSKTIIIDNSPQAFAYQLSNGIPIESW--FMDK 427
>sp|A4QNX6|CTL2B_DANRE CTD small phosphatase-like protein 2-B OS=Danio rerio GN=ctdspl2b
PE=2 SV=1
Length = 460
Score = 52.8 bits (125), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 85/178 (47%), Gaps = 33/178 (18%)
Query: 80 LKKRNTKNLLRMRKLHLVLDLDHTLLHSRLIGKLTSDEKYLEKAAAAAGEFSSDKISRGN 139
LK R+T + LVLDLD TL+H L L+ AA D I +
Sbjct: 274 LKTRSTP------EFSLVLDLDETLVHCSL--------NELDDAALTFPVLFQDVIYQ-- 317
Query: 140 DLFKIKIGDNVLLVKLRPFVRSFLEEASRLFEISVCTLGNREYATRAVKLLDPDCKYFNS 199
+ V+LRPF R FLE S+++EI + T + YA + + +LDP +
Sbjct: 318 -----------VYVRLRPFFREFLERMSQIYEIILFTASKKVYADKLLNILDPRKQLVRH 366
Query: 200 RIITREDFKQKERKYL-DL-VLGQE-NSIVIVDDTESVWGGRVENLITVGSYDFFKDK 254
R+ RE + Y+ DL +LG++ + +I+D++ + ++ N I + S+ F D+
Sbjct: 367 RLF-REHCVCVQGNYIKDLNILGRDLSKTIIIDNSPQAFAYQLSNGIPIESW--FMDR 421
>sp|Q5YDB5|CPL2_ARATH RNA polymerase II C-terminal domain phosphatase-like 2
OS=Arabidopsis thaliana GN=CPL2 PE=1 SV=3
Length = 770
Score = 49.7 bits (117), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 52/104 (50%), Gaps = 10/104 (9%)
Query: 142 FKIKIGDNVLLVKLRPF---VRSFLEEASR-LFEISVCTLGNREYATRAVKLLDPDC--- 194
K +I D +LVKLRP +RS+L +R FE+ VCT+ R+YA +LLDP+
Sbjct: 245 IKPEIRDTSVLVKLRPAWEELRSYLTAKTRKRFEVYVCTMAERDYALEMWRLLDPEAHLI 304
Query: 195 --KYFNSRII-TREDFKQKERKYLDLVLGQENSIVIVDDTESVW 235
K RI+ + D K+ + + +++DD VW
Sbjct: 305 SLKELRDRIVCVKPDAKKSLLSVFNGGICHPKMAMVIDDRMKVW 348
>sp|Q54GB2|CTSL2_DICDI CTD small phosphatase-like protein 2 OS=Dictyostelium discoideum
GN=ctdspl2 PE=3 SV=1
Length = 567
Score = 49.7 bits (117), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 80/167 (47%), Gaps = 32/167 (19%)
Query: 93 KLHLVLDLDHTLLHSRLIGKLTSDEKYLEKAAAAAGEFSSDKISRGNDLFKIKIGDN--V 150
K+ LVLDLD TL+H S++ + + + F + +
Sbjct: 390 KISLVLDLDETLVHC-----------------------STEPLEQPHLTFPVFFNNTEYQ 426
Query: 151 LLVKLRPFVRSFLEEASRLFEISVCTLGNREYATRAVKLLDPDCKYFNSRIITREDFKQK 210
+ K RPF FL + S +FE+ + T YA + + ++DP+ K + R+
Sbjct: 427 VFAKKRPFFEEFLHKVSDIFEVIIFTASQEVYANKLLNMIDPNNKI--KYRLYRDSCVYV 484
Query: 211 ERKYL-DL-VLGQE-NSIVIVDDTESVWGGRVENLITVGSYDFFKDK 254
+ YL DL VLG++ +VI+D++ +G +V+N I + S+ F+D+
Sbjct: 485 DGNYLKDLSVLGRDLKQVVIIDNSPQSFGFQVDNGIPIESW--FEDE 529
>sp|Q3B7T6|CNEP1_RAT CTD nuclear envelope phosphatase 1 OS=Rattus norvegicus GN=Ctdnep1
PE=2 SV=2
Length = 244
Score = 45.4 bits (106), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 95/229 (41%), Gaps = 53/229 (23%)
Query: 68 KGLRYSIDEISRLKKRNTKNLLRMRKLHLVLDLDHTLLHSRLIGKLTSDEKYLEKAAAAA 127
+ +RY I +S L + L ++++ LVLDLD TL+HS G L +
Sbjct: 39 QTVRYDILPLSPLSR---NRLAQVKRKILVLDLDETLIHSHHDGVLRPTVR-----PGTP 90
Query: 128 GEFSSDKISRGNDLFKIKIGDNVL--LVKLRPFVRSFLEEASRLFEISVCTLGNREYATR 185
+F + K+ I + + V RP V FLE S+ +E+ V T Y +
Sbjct: 91 PDF----------ILKVVIDKHPVRFFVHKRPHVDFFLEVVSQWYELVVFTASMEIYGSA 140
Query: 186 AVKLLDPDCKYFNSR-IITREDFKQK-------ERKYLDLVLGQENSIVIVDDTESVWGG 237
LD NSR I+ R ++Q K L +V +SIVI+D++ +
Sbjct: 141 VADKLD------NSRSILKRRYYRQHCTLELGSYIKDLSVVHSDLSSIVILDNSPGAYRS 194
Query: 238 RVENLITVGSYDFFKDKKKNDCKSYSEQMSDESESDGALANILRALKAV 286
+N I + S+ F D SD AL N+L L A+
Sbjct: 195 HPDNAIPIKSW--FSD-----------------PSDTALLNLLPMLDAL 224
>sp|Q3TP92|CNEP1_MOUSE CTD nuclear envelope phosphatase 1 OS=Mus musculus GN=Ctdnep1 PE=2
SV=2
Length = 244
Score = 45.4 bits (106), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 95/229 (41%), Gaps = 53/229 (23%)
Query: 68 KGLRYSIDEISRLKKRNTKNLLRMRKLHLVLDLDHTLLHSRLIGKLTSDEKYLEKAAAAA 127
+ +RY I +S L + L ++++ LVLDLD TL+HS G L +
Sbjct: 39 QTVRYDILPLSPLSR---NRLAQVKRKILVLDLDETLIHSHHDGVLRPTVR-----PGTP 90
Query: 128 GEFSSDKISRGNDLFKIKIGDNVL--LVKLRPFVRSFLEEASRLFEISVCTLGNREYATR 185
+F + K+ I + + V RP V FLE S+ +E+ V T Y +
Sbjct: 91 PDF----------ILKVVIDKHPVRFFVHKRPHVDFFLEVVSQWYELVVFTASMEIYGSA 140
Query: 186 AVKLLDPDCKYFNSR-IITREDFKQK-------ERKYLDLVLGQENSIVIVDDTESVWGG 237
LD NSR I+ R ++Q K L +V +SIVI+D++ +
Sbjct: 141 VADKLD------NSRSILKRRYYRQHCTLELGSYIKDLSVVHSDLSSIVILDNSPGAYRS 194
Query: 238 RVENLITVGSYDFFKDKKKNDCKSYSEQMSDESESDGALANILRALKAV 286
+N I + S+ F D SD AL N+L L A+
Sbjct: 195 HPDNAIPIKSW--FSD-----------------PSDTALLNLLPMLDAL 224
>sp|Q5U3T3|CNEPB_DANRE CTD nuclear envelope phosphatase 1B OS=Danio rerio GN=ctdnep1b PE=2
SV=1
Length = 245
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 101/251 (40%), Gaps = 62/251 (24%)
Query: 68 KGLRYSIDEISRLKKRNTKNLLRMRKLHLVLDLDHTLLHSRLIGKLTSDEKYLEKAAAAA 127
+ +RY I +S + + N+ RK+ LVLDLD TL+HS G L +
Sbjct: 40 QTVRYDILSLSPISRNRLNNV--KRKI-LVLDLDETLIHSHHDGVLRPTVR-----PGTP 91
Query: 128 GEFSSDKISRGNDLFKIKIGDNVL--LVKLRPFVRSFLEEASRLFEISVCTLGNREYATR 185
+F + K+ I + + V RP V FLE S+ +E+ V T Y +
Sbjct: 92 PDF----------ILKVVIDKHPVRFFVHKRPHVDFFLEVVSQWYELVVFTASMEIYGSA 141
Query: 186 AVKLLDPDCKYFNSRIITREDFKQK-------ERKYLDLVLGQENSIVIVDDTESVWGGR 238
LD N I+ R ++Q K L +V +S+VI+D++ +
Sbjct: 142 VADKLDN-----NKAILKRRYYRQHCTLDSGSYIKDLSVVHDDLSSVVILDNSPGAYRSH 196
Query: 239 VENLITVGSYDFFKDKKKNDCKSYSEQMSDESESDGALANILRALKAVHALYFDNPGNHA 298
+N I + S+ F D SD AL N+L L A+ P
Sbjct: 197 PDNAIPIKSW--FSD-----------------PSDTALLNLLPMLDALRF-----PA--- 229
Query: 299 AGRDVRSCLAK 309
DVRS L++
Sbjct: 230 ---DVRSVLSR 237
>sp|Q5U395|CNEPA_DANRE CTD nuclear envelope phosphatase 1A OS=Danio rerio GN=ctdnep1a PE=2
SV=1
Length = 245
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 106/252 (42%), Gaps = 64/252 (25%)
Query: 68 KGLRYSIDEISRLKKRNTKNLLRMRKLHLVLDLDHTLLHSRLIGKLTSDEKYLEKAAAAA 127
+ +RY I +S + RN N ++ RK+ LVLDLD TL+HS G L +
Sbjct: 40 QTVRYDILPLSPIS-RNRLNAVK-RKI-LVLDLDETLIHSHHDGVLRPTVR-----PGTP 91
Query: 128 GEFSSDKISRGNDLFKIKIGDNVL--LVKLRPFVRSFLEEASRLFEISVCTLGNREYATR 185
+F + K+ I + + V RP V FLE S+ +E+ V T Y +
Sbjct: 92 PDF----------ILKVVIDKHPVRFFVHKRPHVDFFLEVVSQWYELVVFTASMEIYGSA 141
Query: 186 AVKLLDPDCKYFNSR-IITREDFKQK-------ERKYLDLVLGQENSIVIVDDTESVWGG 237
LD N+R I+ R ++Q K L +V +SIVI+D++ +
Sbjct: 142 VADKLD------NNRGILKRRYYRQHCTLDLGSYIKDLSVVHSDLSSIVILDNSPGAYRS 195
Query: 238 RVENLITVGSYDFFKDKKKNDCKSYSEQMSDESESDGALANILRALKAVHALYFDNPGNH 297
+N I + S+ F D SD AL N+L L AL F +
Sbjct: 196 HPDNAIPIKSW--FSD-----------------PSDTALLNLLPMLD---ALRFTS---- 229
Query: 298 AAGRDVRSCLAK 309
DVRS L++
Sbjct: 230 ----DVRSVLSR 237
>sp|Q07800|PSR1_YEAST Phosphatase PSR1 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=PSR1 PE=1 SV=1
Length = 427
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 79/169 (46%), Gaps = 34/169 (20%)
Query: 96 LVLDLDHTLLHSRLIGKLTSDEKYLEKAAAAAGEFSSDKISRGNDLFKIKIGD---NVLL 152
L+LDLD TL+HS KYL A +F + ++I D NV +
Sbjct: 260 LILDLDETLVHSSF--------KYLRSA-----DF----------VLSVEIDDQVHNVYV 296
Query: 153 VKLRPFVRSFLEEASRLFEISVCTLGNREYATRAVKLLDPDCKYFNSRIITREDFKQKER 212
+K RP V FLE +LFE+ V T Y + +LD D K + R+ RE E
Sbjct: 297 IK-RPGVEEFLERVGKLFEVVVFTASVSRYGDPLLDILDTD-KVIHHRLF-REACYNYEG 353
Query: 213 KYLDLV--LGQENS-IVIVDDTESVWGGRVENLITVGSYDFFKDKKKND 258
Y+ + +G+ S I+I+D++ + + ++ I + S+ F D N+
Sbjct: 354 NYIKNLSQIGRPLSDIIILDNSPASYIFHPQHAIPISSW--FSDTHDNE 400
>sp|O95476|CNEP1_HUMAN CTD nuclear envelope phosphatase 1 OS=Homo sapiens GN=CTDNEP1 PE=1
SV=2
Length = 244
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 95/229 (41%), Gaps = 53/229 (23%)
Query: 68 KGLRYSIDEISRLKKRNTKNLLRMRKLHLVLDLDHTLLHSRLIGKLTSDEKYLEKAAAAA 127
+ +RY I +S + + L ++++ LVLDLD TL+HS G L +
Sbjct: 39 QTVRYDILPLSPVSR---NRLAQVKRKILVLDLDETLIHSHHDGVLRPTVR-----PGTP 90
Query: 128 GEFSSDKISRGNDLFKIKIGDNVL--LVKLRPFVRSFLEEASRLFEISVCTLGNREYATR 185
+F + K+ I + + V RP V FLE S+ +E+ V T Y +
Sbjct: 91 PDF----------ILKVVIDKHPVRFFVHKRPHVDFFLEVVSQWYELVVFTASMEIYGSA 140
Query: 186 AVKLLDPDCKYFNSR-IITREDFKQK-------ERKYLDLVLGQENSIVIVDDTESVWGG 237
LD NSR I+ R ++Q K L +V +SIVI+D++ +
Sbjct: 141 VADKLD------NSRSILKRRYYRQHCTLELGSYIKDLSVVHSDLSSIVILDNSPGAYRS 194
Query: 238 RVENLITVGSYDFFKDKKKNDCKSYSEQMSDESESDGALANILRALKAV 286
+N I + S+ F D SD AL N+L L A+
Sbjct: 195 HPDNAIPIKSW--FSD-----------------PSDTALLNLLPMLDAL 224
>sp|Q5YDB6|CPL1_ARATH RNA polymerase II C-terminal domain phosphatase-like 1
OS=Arabidopsis thaliana GN=CPL1 PE=1 SV=1
Length = 967
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 53/101 (52%), Gaps = 12/101 (11%)
Query: 146 IGDNVLLVKLRPF---VRSFLEEASR-LFEISVCTLGNREYATRAVKLLDPDCKYFNS-- 199
I D +LV++RP +RS+L R FE+ VCT+ R+YA +LLDP+ N+
Sbjct: 266 IRDTSVLVRMRPSWEELRSYLTAKGRKRFEVYVCTMAERDYALEMWRLLDPEGNLINTND 325
Query: 200 ---RII-TREDFKQKE-RKYLDLVLGQENSIVIVDDTESVW 235
RI+ + FK+ +LD + ++VI DD VW
Sbjct: 326 LLARIVCVKSGFKKSLFNVFLDGTCHPKMALVI-DDRLKVW 365
>sp|Q1RMV9|CNEP1_BOVIN CTD nuclear envelope phosphatase 1 OS=Bos taurus GN=CTDNEP1 PE=2
SV=1
Length = 244
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 95/229 (41%), Gaps = 53/229 (23%)
Query: 68 KGLRYSIDEISRLKKRNTKNLLRMRKLHLVLDLDHTLLHSRLIGKLTSDEKYLEKAAAAA 127
+ +RY I +S + + L ++++ LVLDLD TL+HS G L +
Sbjct: 39 QTVRYDILPLSPVSR---NRLSQVKRKILVLDLDETLIHSHHDGVLRPTVR-----PGTP 90
Query: 128 GEFSSDKISRGNDLFKIKIGDNVL--LVKLRPFVRSFLEEASRLFEISVCTLGNREYATR 185
+F + K+ I + + V RP V FLE S+ +E+ V T Y +
Sbjct: 91 PDF----------ILKVVIDKHPVRFFVHKRPHVDFFLEVVSQWYELVVFTASMEIYGSA 140
Query: 186 AVKLLDPDCKYFNSR-IITREDFKQK-------ERKYLDLVLGQENSIVIVDDTESVWGG 237
LD NSR I+ R ++Q K L +V +SIVI+D++ +
Sbjct: 141 VADKLD------NSRSILKRRYYRQHCTLELGSYIKDLSVVHSDLSSIVILDNSPGAYRS 194
Query: 238 RVENLITVGSYDFFKDKKKNDCKSYSEQMSDESESDGALANILRALKAV 286
+N I + S+ F D SD AL N+L L A+
Sbjct: 195 HPDNAIPIKSW--FSD-----------------PSDTALLNLLPMLDAL 224
>sp|Q9N4V4|SCPL3_CAEEL CTD small phosphatase-like protein 3 OS=Caenorhabditis elegans
GN=scpl-3 PE=3 SV=1
Length = 287
Score = 43.1 bits (100), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 91/215 (42%), Gaps = 54/215 (25%)
Query: 96 LVLDLDHTLLHSRLIGKLTSDEKYLEKAAAAAGEFSSDKISRGNDLFKIKIGDNVLLVKL 155
LVLDLD TL+H L L+ A + N +++ V+L
Sbjct: 67 LVLDLDETLVHCSLTP--------LDNATMVF------PVVFQNITYQV-------YVRL 105
Query: 156 RPFVRSFLEEASRLFEISVCTLGNREYATRAVKLLDPDCKYFNSRIITREDFKQKERKYL 215
RP +R+FL ++ FEI + T + YA + +LDP + R+ RE Y+
Sbjct: 106 RPHLRTFLSRMAKTFEIIIFTASKKVYANKLCDILDPRKNHIRHRLF-REHCVCVFGNYV 164
Query: 216 -DL-VLGQENS-IVIVDDTESVWGGRVENLITVGSYDFFKDKKKNDCKSYSEQMSDESES 272
DL +LG++ S +I+D+ + +++N I + S+ F D+ +
Sbjct: 165 KDLTILGRDPSKTMILDNAVQSFAYQLDNGIPIESW--FHDR-----------------N 205
Query: 273 DGALANILRALKAVHALYFDNPGNHAAGRDVRSCL 307
D L + L+A+ L GRDVR L
Sbjct: 206 DTELLKLCSFLEAIPTL----------GRDVREIL 230
>sp|Q07949|PSR2_YEAST Probable phosphatase PSR2 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=PSR2 PE=1 SV=1
Length = 397
Score = 41.6 bits (96), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 47/101 (46%), Gaps = 27/101 (26%)
Query: 96 LVLDLDHTLLHSRLIGKLTSDEKYLEKAAAAAGEFSSDKISRGNDLFKIKIGD---NVLL 152
L+LDLD TL+HS KY+ A +F + ++I D NV +
Sbjct: 230 LILDLDETLVHSSF--------KYMHSA-----DF----------VLPVEIDDQVHNVYV 266
Query: 153 VKLRPFVRSFLEEASRLFEISVCTLGNREYATRAVKLLDPD 193
+K RP V FL S+L+E+ V T YA + LDP+
Sbjct: 267 IK-RPGVDEFLNRVSQLYEVVVFTASVSRYANPLLDTLDPN 306
>sp|Q9PTJ6|CTDSL_CHICK CTD small phosphatase-like protein OS=Gallus gallus GN=NFI1 PE=2
SV=2
Length = 275
Score = 41.2 bits (95), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 76/181 (41%), Gaps = 29/181 (16%)
Query: 96 LVLDLDHTLLHSRLIGKLTSDEKYLEKAAAAAGEFSSDKISRGNDLFKIKIGDNV--LLV 153
+V+DLD TL+HS S IS + + ++I + + V
Sbjct: 108 VVIDLDETLVHS-----------------------SFKPISNADFIVPVEIDGTIHQVYV 144
Query: 154 KLRPFVRSFLEEASRLFEISVCTLGNREYATRAVKLLDPDCKYFNSRIITREDFKQKERK 213
RP V FL+ LFE + T +YA LLD F +R+ +
Sbjct: 145 LKRPHVDEFLQRMGELFECVLFTASLAKYADPVADLLD-RWGVFRARLFRESCVFHRGNY 203
Query: 214 YLDLV-LGQENS-IVIVDDTESVWGGRVENLITVGS-YDFFKDKKKNDCKSYSEQMSDES 270
DL LG+E S ++IVD++ + + EN + V S +D D + D + E +S E
Sbjct: 204 VKDLSRLGRELSKVIIVDNSPASYIFHPENAVPVQSWFDDMTDTELLDLIPFFEGLSKEE 263
Query: 271 E 271
E
Sbjct: 264 E 264
>sp|Q28HW9|CNEP1_XENTR CTD nuclear envelope phosphatase 1 OS=Xenopus tropicalis GN=ctdnep1
PE=2 SV=1
Length = 244
Score = 40.8 bits (94), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 94/229 (41%), Gaps = 53/229 (23%)
Query: 68 KGLRYSIDEISRLKKRNTKNLLRMRKLHLVLDLDHTLLHSRLIGKLTSDEKYLEKAAAAA 127
+ +RY + +S RN L ++++ LVLDLD TL+HS G L +
Sbjct: 39 QTVRYDVLPLSP-ASRN--RLSQVKRKVLVLDLDETLIHSHHDGVLRPTVR-----PGTP 90
Query: 128 GEFSSDKISRGNDLFKIKIGDNVL--LVKLRPFVRSFLEEASRLFEISVCTLGNREYATR 185
+F + K+ I + + V RP V FLE S+ +E+ V T Y +
Sbjct: 91 PDF----------ILKVVIDKHPVRFFVHKRPHVDFFLEVVSQWYELVVFTASMEIYGSA 140
Query: 186 AVKLLDPDCKYFNSRIITREDFKQKE--------RKYLDLVLGQENSIVIVDDTESVWGG 237
LD N+R + R F ++ K L +V +S+VI+D++ +
Sbjct: 141 VADKLD------NNRGVLRRRFYRQHCTLELGSYIKDLSVVHSDLSSVVILDNSPGAYRS 194
Query: 238 RVENLITVGSYDFFKDKKKNDCKSYSEQMSDESESDGALANILRALKAV 286
+N I + S+ F D SD AL N+L L A+
Sbjct: 195 HPDNAIPIKSW--FSD-----------------PSDTALLNLLPMLDAL 224
>sp|Q20432|CNEP1_CAEEL CTD nuclear envelope phosphatase 1 homolog OS=Caenorhabditis
elegans GN=scpl-2 PE=3 SV=1
Length = 246
Score = 40.0 bits (92), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 66/172 (38%), Gaps = 25/172 (14%)
Query: 84 NTKNLLRMRKLHLVLDLDHTLLHSRLIGKLTSDEKYLEKAAAAAGEFSSDKISRGNDLFK 143
T LL +++ LVLDLD TL+HS G L + G S I D
Sbjct: 48 TTHRLLTVKRKILVLDLDETLIHSHHDGVL--------RQTVKPGTPSDFTIRVVIDRHP 99
Query: 144 IKIGDNVLLVKLRPFVRSFLEEASRLFEISVCTLGNREYATRAVKLLDPDCKYFNSRIIT 203
+K V RP V FL S+ +E+ V T Y T LD I+
Sbjct: 100 VKFS-----VHERPHVDYFLSVVSQWYELVVFTASMEVYGTSVADRLDR-----GRGILK 149
Query: 204 REDFKQK-------ERKYLDLVLGQENSIVIVDDTESVWGGRVENLITVGSY 248
R F+Q K L + +SI I+D++ + N I + S+
Sbjct: 150 RRYFRQHCTMEVGGYTKDLSAIHPDLSSICILDNSPGAYRKFPHNAIPIPSW 201
>sp|P58465|CTDSL_MOUSE CTD small phosphatase-like protein OS=Mus musculus GN=Ctdspl PE=2
SV=3
Length = 276
Score = 40.0 bits (92), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 77/181 (42%), Gaps = 29/181 (16%)
Query: 96 LVLDLDHTLLHSRLIGKLTSDEKYLEKAAAAAGEFSSDKISRGNDLFKIKIGDNV--LLV 153
+V+DLD TL+HS S IS + + ++I + + V
Sbjct: 109 VVIDLDETLVHS-----------------------SFKPISNADFIVPVEIDGTIHQVYV 145
Query: 154 KLRPFVRSFLEEASRLFEISVCTLGNREYATRAVKLLDPDCKYFNSRIITREDFKQKERK 213
RP V FL+ +LFE + T +YA LLD F +R+ +
Sbjct: 146 LKRPHVDEFLQRMGQLFECVLFTASLAKYADPVADLLD-RWGVFRARLFRESCVFHRGNY 204
Query: 214 YLDLV-LGQENS-IVIVDDTESVWGGRVENLITVGS-YDFFKDKKKNDCKSYSEQMSDES 270
DL LG+E S ++IVD++ + + EN + V S +D D + D + E +S E
Sbjct: 205 VKDLSRLGRELSKVIIVDNSPASYIFHPENAVPVQSWFDDMTDTELLDLIPFFEGLSRED 264
Query: 271 E 271
+
Sbjct: 265 D 265
>sp|O15194|CTDSL_HUMAN CTD small phosphatase-like protein OS=Homo sapiens GN=CTDSPL PE=1
SV=2
Length = 276
Score = 39.7 bits (91), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 77/181 (42%), Gaps = 29/181 (16%)
Query: 96 LVLDLDHTLLHSRLIGKLTSDEKYLEKAAAAAGEFSSDKISRGNDLFKIKIGDNV--LLV 153
+V+DLD TL+HS S IS + + ++I + + V
Sbjct: 109 VVIDLDETLVHS-----------------------SFKPISNADFIVPVEIDGTIHQVYV 145
Query: 154 KLRPFVRSFLEEASRLFEISVCTLGNREYATRAVKLLDPDCKYFNSRIITREDFKQKERK 213
RP V FL+ +LFE + T +YA LLD F +R+ +
Sbjct: 146 LKRPHVDEFLQRMGQLFECVLFTASLAKYADPVADLLD-RWGVFRARLFRESCVFHRGNY 204
Query: 214 YLDLV-LGQENS-IVIVDDTESVWGGRVENLITVGS-YDFFKDKKKNDCKSYSEQMSDES 270
DL LG+E S ++IVD++ + + EN + V S +D D + D + E +S E
Sbjct: 205 VKDLSRLGRELSKVIIVDNSPASYIFHPENAVPVQSWFDDMTDTELLDLIPFFEGLSRED 264
Query: 271 E 271
+
Sbjct: 265 D 265
>sp|Q8JIL9|CNEP1_XENLA CTD nuclear envelope phosphatase 1 OS=Xenopus laevis GN=ctdnep1
PE=1 SV=1
Length = 244
Score = 39.7 bits (91), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 94/229 (41%), Gaps = 53/229 (23%)
Query: 68 KGLRYSIDEISRLKKRNTKNLLRMRKLHLVLDLDHTLLHSRLIGKLTSDEKYLEKAAAAA 127
+ +RY + +S RN L ++++ LVLDLD TL+HS G L +
Sbjct: 39 QTVRYDVLPLSP-ASRN--RLSQVKRKVLVLDLDETLIHSHHDGVLRPTVR-----PGTP 90
Query: 128 GEFSSDKISRGNDLFKIKIGDNVL--LVKLRPFVRSFLEEASRLFEISVCTLGNREYATR 185
+F + K+ I + + V RP V FLE S+ +E+ V T Y +
Sbjct: 91 PDF----------ILKVVIDKHPVRFFVHKRPHVDFFLEVVSQWYELVVFTASMEIYGSA 140
Query: 186 AVKLLDPDCKYFNSRIITREDFKQKE--------RKYLDLVLGQENSIVIVDDTESVWGG 237
LD N++ + R F ++ K L +V +S+VI+D++ +
Sbjct: 141 VADKLD------NNKGVLRRRFYRQHCTLELGSYIKDLSVVHSDLSSVVILDNSPGAYRS 194
Query: 238 RVENLITVGSYDFFKDKKKNDCKSYSEQMSDESESDGALANILRALKAV 286
+N I + S+ F D SD AL N+L L A+
Sbjct: 195 HPDNAIPIKSW--FSD-----------------PSDTALLNLLPMLDAL 224
>sp|Q9XYL0|CTDS_DICDI Probable C-terminal domain small phosphatase OS=Dictyostelium
discoideum GN=fcpA PE=3 SV=1
Length = 306
Score = 38.1 bits (87), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 63/155 (40%), Gaps = 24/155 (15%)
Query: 96 LVLDLDHTLLHSRLIGKLTSDEKYLEKAAAAAGEFSSDKISRGNDLFKIKIGDNVLLVKL 155
LVLDLD TL+HS K + ++ V +VK
Sbjct: 139 LVLDLDETLVHSSF--KPVHNPDFIVPVEIEGTIHQ------------------VYVVK- 177
Query: 156 RPFVRSFLEEASRLFEISVCTLGNREYATRAVKLLDPDCKYFNSRIITREDFKQKERKYL 215
RPFV FL + FEI V T +YA + LD + + R+ K
Sbjct: 178 RPFVDDFLRAIAEKFEIVVFTASLAKYADPVLDFLD-TGRVIHYRLFRESCHNHKGNYVK 236
Query: 216 DLV-LGQE-NSIVIVDDTESVWGGRVENLITVGSY 248
DL LG++ S +IVD++ S + EN I + S+
Sbjct: 237 DLSRLGRDLKSTIIVDNSPSSYLFHPENAIPIDSW 271
>sp|Q61C05|CNEP1_CAEBR CTD nuclear envelope phosphatase 1 homolog OS=Caenorhabditis
briggsae GN=scpl-2 PE=3 SV=1
Length = 246
Score = 38.1 bits (87), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 66/172 (38%), Gaps = 25/172 (14%)
Query: 84 NTKNLLRMRKLHLVLDLDHTLLHSRLIGKLTSDEKYLEKAAAAAGEFSSDKISRGNDLFK 143
T LL +++ LVLDLD TL+HS G L + G S I D
Sbjct: 48 TTHRLLTVKRKILVLDLDETLIHSHHDGVL--------RQTVKPGTPSDFTIRVVIDRHP 99
Query: 144 IKIGDNVLLVKLRPFVRSFLEEASRLFEISVCTLGNREYATRAVKLLDPDCKYFNSRIIT 203
+K V RP V FL S+ +E+ V T Y + LD I+
Sbjct: 100 VKFS-----VHERPHVDYFLTVVSQWYELVVFTASMEVYGSSVADKLDR-----GRGILK 149
Query: 204 REDFKQK-------ERKYLDLVLGQENSIVIVDDTESVWGGRVENLITVGSY 248
R F+Q K L + +SI I+D++ + N I + S+
Sbjct: 150 RRYFRQHCTMEVGGYTKDLSAIHPDLSSICILDNSPGAYRKFPHNAIPIPSW 201
>sp|P58466|CTDS1_MOUSE Carboxy-terminal domain RNA polymerase II polypeptide A small
phosphatase 1 OS=Mus musculus GN=Ctdsp1 PE=1 SV=1
Length = 261
Score = 37.7 bits (86), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 77/180 (42%), Gaps = 29/180 (16%)
Query: 93 KLHLVLDLDHTLLHSRLIGKLTSDEKYLEKAAAAAGEFSSDKISRGNDLFKIKIGDNV-- 150
K+ +V+DLD TL+HS S ++ + + ++I V
Sbjct: 90 KICVVIDLDETLVHS-----------------------SFKPVNNADFIIPVEIDGVVHQ 126
Query: 151 LLVKLRPFVRSFLEEASRLFEISVCTLGNREYATRAVKLLDPDCKYFNSRIITREDFKQK 210
+ V RP V FL+ LFE + T +YA LLD F +R+ +
Sbjct: 127 VYVLKRPHVDEFLQRMGELFECVLFTASLAKYADPVADLLD-KWGAFRARLFRESCVFHR 185
Query: 211 ERKYLDLV-LGQE-NSIVIVDDTESVWGGRVENLITVGS-YDFFKDKKKNDCKSYSEQMS 267
DL LG++ ++I+D++ + + +N + V S +D D + +D + EQ+S
Sbjct: 186 GNYVKDLSRLGRDLRRVLILDNSPASYVFHPDNAVPVASWFDNMSDTELHDLLPFFEQLS 245
>sp|Q9GZU7|CTDS1_HUMAN Carboxy-terminal domain RNA polymerase II polypeptide A small
phosphatase 1 OS=Homo sapiens GN=CTDSP1 PE=1 SV=1
Length = 261
Score = 37.7 bits (86), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 77/180 (42%), Gaps = 29/180 (16%)
Query: 93 KLHLVLDLDHTLLHSRLIGKLTSDEKYLEKAAAAAGEFSSDKISRGNDLFKIKIGDNV-- 150
K+ +V+DLD TL+HS S ++ + + ++I V
Sbjct: 90 KICVVIDLDETLVHS-----------------------SFKPVNNADFIIPVEIDGVVHQ 126
Query: 151 LLVKLRPFVRSFLEEASRLFEISVCTLGNREYATRAVKLLDPDCKYFNSRIITREDFKQK 210
+ V RP V FL+ LFE + T +YA LLD F +R+ +
Sbjct: 127 VYVLKRPHVDEFLQRMGELFECVLFTASLAKYADPVADLLD-KWGAFRARLFRESCVFHR 185
Query: 211 ERKYLDLV-LGQE-NSIVIVDDTESVWGGRVENLITVGS-YDFFKDKKKNDCKSYSEQMS 267
DL LG++ ++I+D++ + + +N + V S +D D + +D + EQ+S
Sbjct: 186 GNYVKDLSRLGRDLRRVLILDNSPASYVFHPDNAVPVASWFDNMSDTELHDLLPFFEQLS 245
>sp|Q6GZT9|037R_FRG3G uncharacterized protein 037R OS=Frog virus 3 (isolate Goorha)
GN=FV3-037R PE=4 SV=1
Length = 209
Score = 37.7 bits (86), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 77/166 (46%), Gaps = 28/166 (16%)
Query: 94 LHLVLDLDHTLLHSRLIGKL--TSDEKYLEKAAAA--AGEF------SSDKISRGN---- 139
+ + LDLD TL+HS + +L T + Y K AG SS ++ G
Sbjct: 1 MQVFLDLDETLIHSIPVSRLGWTKSKPYPVKPFTVQDAGTPLSVMMGSSKAVNDGRKRLA 60
Query: 140 ---DLFKIKI-GDNVLLVKLRPFVRSFLEEA-SRLFEISVCTLGNREYATRAVKLLDPDC 194
LFK + D+++ RP +R+FL + ++I+V T ++ YA VK L+
Sbjct: 61 TRLSLFKRTVLTDHIMC--WRPTLRTFLNGLFASGYKINVWTAASKPYALEVVKALNLKS 118
Query: 195 KYFNSRIITREDFKQ---KERKY---LDLVLGQENSIVIVDDTESV 234
Y ++T +D+ + K KY LD V ++ IVDD E V
Sbjct: 119 -YGMGLLVTAQDYPKGSVKRLKYLTGLDAVKIPLSNTAIVDDREEV 163
>sp|Q91FG9|VF355_IIV6 Putative CTD phosphatase-like protein 355R OS=Invertebrate
iridescent virus 6 GN=IIV6-355R PE=3 SV=1
Length = 182
Score = 37.4 bits (85), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 82/182 (45%), Gaps = 35/182 (19%)
Query: 95 HLVLDLDHTLLHSRLIGKLTSDEKYLEKAAAAAGEFSSDKISRGNDLFKIKIGDNVLLVK 154
++ LDLD+TL+ + +T ++ E+A+ F K ++ L+
Sbjct: 3 NIFLDLDNTLICAEPFEDITDLGRFKERASH----------------FDFKNMEDYYLIC 46
Query: 155 LRPFVRSFLEEASRLFEISVCTLGNREYATRAVKLL----DPDCKY------FNSRIITR 204
RP+++ FL+ + F + + T ++ YA+ ++ DP K + R+ R
Sbjct: 47 GRPYLQPFLDYLFKNFNVHIWTAASKGYASFIIEEFILKKDPSRKINLVLFDHHCRVSKR 106
Query: 205 EDFKQKERKYLDLV--------LGQENSIVIVDDTESVWGGRVENLITVGSYDFFKDKKK 256
K+K K L+++ +EN+ I+DD E V +V+N +V + F ++ +
Sbjct: 107 VYKKEKASKKLEMLWTIWKLQEFDKENTF-IIDDLEEVKESQVKNCFSVKPFFFMENDSE 165
Query: 257 ND 258
D
Sbjct: 166 YD 167
>sp|O59718|NEM1_SCHPO Nuclear envelope morphology protein 1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=nem1 PE=3 SV=1
Length = 476
Score = 35.0 bits (79), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 80/203 (39%), Gaps = 55/203 (27%)
Query: 96 LVLDLDHTLLHSRLIGKLTSDEKYLEKAAAAAGEFSSDKISRGNDLFKIKIGDNVLL--V 153
LVLDLD TL+HS G T+ + +E G++ +L +
Sbjct: 306 LVLDLDETLIHSVSRGSRTTSGQPIEVHVP---------------------GEHPILYYI 344
Query: 154 KLRPFVRSFLEEASRLFEISVCTLGNREYATRAVKLLDPDCKYFNSRIITREDFKQKERK 213
RP + FL S+ F + + T + YA + L+ D K F R + ++
Sbjct: 345 HKRPHLDYFLSNVSQWFRLILFTASVQPYADPIIDYLERDKKIFAKR------YYRQHCA 398
Query: 214 YLDLVLGQENS--------IVIVDDTESVWGGRVENLITVGSYDFFKDKKKNDCKSYSEQ 265
+D ++ S I+I+D++ + + EN I + +
Sbjct: 399 LVDSSFVKDISICNIHLSRIMIIDNSPASYNAHKENAIPIEGW----------------- 441
Query: 266 MSDESESDGA-LANILRALKAVH 287
+SD S+ D L + L AL+ VH
Sbjct: 442 ISDPSDVDLLNLLSFLHALQYVH 464
>sp|Q8BX07|CTDS2_MOUSE Carboxy-terminal domain RNA polymerase II polypeptide A small
phosphatase 2 OS=Mus musculus GN=Ctdsp2 PE=2 SV=1
Length = 270
Score = 34.7 bits (78), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 70/161 (43%), Gaps = 30/161 (18%)
Query: 93 KLHLVLDLDHTLLHSRLIGKLTSDEKYLEKAAAAAGEFSSDKISRGNDLFKIKIGDNV-- 150
++ +V+DLD TL+HS S I+ + + ++I
Sbjct: 100 RICVVIDLDETLVHS-----------------------SFKPINNADFIVPVEIEGTTHQ 136
Query: 151 LLVKLRPFVRSFLEEASRLFEISVCTLGNREYATRAVKLLDPDCKYFNSRIITREDFKQK 210
+ V RP+V FL LFE + T +YA LLD C F +R+ RE
Sbjct: 137 VYVLKRPYVDEFLRRMGELFECVLFTASLAKYADPVTDLLD-RCGVFRARLF-REACVFH 194
Query: 211 ERKYL-DLV-LGQE-NSIVIVDDTESVWGGRVENLITVGSY 248
+ Y+ DL LG++ VI+D++ + + EN + V S+
Sbjct: 195 QGCYVKDLSRLGRDLRKTVILDNSPASYIFHPENAVPVQSW 235
>sp|O14595|CTDS2_HUMAN Carboxy-terminal domain RNA polymerase II polypeptide A small
phosphatase 2 OS=Homo sapiens GN=CTDSP2 PE=1 SV=2
Length = 271
Score = 34.7 bits (78), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 70/161 (43%), Gaps = 30/161 (18%)
Query: 93 KLHLVLDLDHTLLHSRLIGKLTSDEKYLEKAAAAAGEFSSDKISRGNDLFKIKIGDNV-- 150
++ +V+DLD TL+HS S I+ + + I+I
Sbjct: 101 RICVVIDLDETLVHS-----------------------SFKPINNADFIVPIEIEGTTHQ 137
Query: 151 LLVKLRPFVRSFLEEASRLFEISVCTLGNREYATRAVKLLDPDCKYFNSRIITREDFKQK 210
+ V RP+V FL LFE + T +YA LLD C F +R+ RE
Sbjct: 138 VYVLKRPYVDEFLRRMGELFECVLFTASLAKYADPVTDLLD-RCGVFRARLF-RESCVFH 195
Query: 211 ERKYL-DLV-LGQE-NSIVIVDDTESVWGGRVENLITVGSY 248
+ Y+ DL LG++ +I+D++ + + EN + V S+
Sbjct: 196 QGCYVKDLSRLGRDLRKTLILDNSPASYIFHPENAVPVQSW 236
>sp|Q09695|YA22_SCHPO Uncharacterized protein C2F7.02c OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC2F7.02c PE=1 SV=1
Length = 325
Score = 34.3 bits (77), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 46/99 (46%), Gaps = 27/99 (27%)
Query: 96 LVLDLDHTLLHSRLIGKLTSDEKYLEKAAAAAGEFSSDKISRGNDLFKIKI---GDNVLL 152
L+LDLD TL+HS KY+E A + + I+I +V +
Sbjct: 160 LILDLDETLVHSSF--------KYIEPA---------------DFVVSIEIDGLQHDVRV 196
Query: 153 VKLRPFVRSFLEEASRLFEISVCTLGNREYATRAVKLLD 191
VK RP V FL++ +FEI V T +YA + +LD
Sbjct: 197 VK-RPGVDEFLKKMGDMFEIVVFTASLAKYADPVLDMLD 234
>sp|P38757|NEM1_YEAST Nuclear envelope morphology protein 1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=NEM1 PE=1 SV=1
Length = 446
Score = 34.3 bits (77), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 75/178 (42%), Gaps = 41/178 (23%)
Query: 91 MRKLHLVLDLDHTLLHSRLIGKLTSDEKYLEKAAAAAGEFSSDKISRGNDLFKIKIG--- 147
+K LV+DLD TL+HS A+ + S+G+ L ++K G
Sbjct: 249 QKKKKLVIDLDETLIHS------------------ASRSTTHSNSSQGH-LVEVKFGLSG 289
Query: 148 -DNVLLVKLRPFVRSFLEEASRLFEISVCTLGNREYATRAVKLLD---PDC---KYFNSR 200
+ + RP+ FL + S+ +++ + T +EYA + L+ P +Y+ S
Sbjct: 290 IRTLYFIHKRPYCDLFLTKVSKWYDLIIFTASMKEYADPVIDWLESSFPSSFSKRYYRSD 349
Query: 201 IITREDFKQKERKYLDLVLGQE----------NSIVIVDDTESVWGGRVENLITVGSY 248
+ R+ K L +V E + ++I+D++ + V+N I V +
Sbjct: 350 CVLRDGVGY--IKDLSIVKDSEENGKGSSSSLDDVIIIDNSPVSYAMNVDNAIQVEGW 405
>sp|Q196V6|VF355_IIV3 Putative CTD phosphatase-like protein 355R OS=Invertebrate
iridescent virus 3 GN=IIV3-104L PE=3 SV=1
Length = 186
Score = 33.9 bits (76), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 90/197 (45%), Gaps = 35/197 (17%)
Query: 92 RKLHLVLDLDHTLLHSRLIGKLTSDEKYLEKAAAAAGEFSSDKISRGNDLFKIKIGDNVL 151
+K ++LDLD+TL+ + + + D+K L + A +F + ++ D+F+
Sbjct: 5 KKKLILLDLDNTLICAEDLDTV-KDKKRL---SQAQKQFRTVRMEDYYDIFE-------- 52
Query: 152 LVKLRPFVRSFLEEASRLFEISVCTLGNREYATRAVK--LLDPDCKYFNSRII------- 202
RP ++ FL+ + F++ V T +++YA +K + P K R I
Sbjct: 53 ----RPHLQEFLDYLFKNFKVGVWTASSKDYAIFVIKNFITAPQNKVKPDRKIEIFLCSH 108
Query: 203 ----TREDFKQKERKYLDLVLGQE-----NSIVIVDDTESVWGGRVENLITVGSYDFFKD 253
+++ FK + L LV Q + + +VDD E + + EN+I V + + +
Sbjct: 109 HCNVSKKYFKGISKD-LKLVTDQWKIIDLSQVKLVDDLEKLANHQPENVIHVKPFFYDEP 167
Query: 254 KKKNDCKSYSEQMSDES 270
KND + Q + E+
Sbjct: 168 NSKNDTELLKVQKTLET 184
>sp|Q92I35|SYL_RICCN Leucine--tRNA ligase OS=Rickettsia conorii (strain ATCC VR-613 /
Malish 7) GN=leuS PE=3 SV=1
Length = 835
Score = 32.7 bits (73), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 53/118 (44%), Gaps = 18/118 (15%)
Query: 64 DYIEKGLRYSIDEISRLKKRNTKNLLRMRKLHLVLDLDHTLLHSRLIGKLTSDEKYLEKA 123
+Y+ K + D+++ + L+ H+ D+ H L +R I ++ E +
Sbjct: 657 EYMFKAIDSLKDDVNSEVNKELNRLVHFTIKHVAEDIKHFAL-NRAIARMR------ELS 709
Query: 124 AAAAGEFSSDKISRGNDLFKIKIGDNVLLVKLRPFVRSFLEEASRLFEISVCTLGNRE 181
A + E S DKI D+ ++ G NVL+ L PF+ EE + LGN+E
Sbjct: 710 NAISAEISKDKI----DVKTVRHGFNVLVQLLNPFIPHITEEIWQ-------KLGNKE 756
>sp|C3PNE7|SYL_RICAE Leucine--tRNA ligase OS=Rickettsia africae (strain ESF-5) GN=leuS
PE=3 SV=1
Length = 835
Score = 32.7 bits (73), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 53/118 (44%), Gaps = 18/118 (15%)
Query: 64 DYIEKGLRYSIDEISRLKKRNTKNLLRMRKLHLVLDLDHTLLHSRLIGKLTSDEKYLEKA 123
+Y+ K + D+++ + L+ H+ D+ H L +R I ++ E +
Sbjct: 657 EYMFKAIDSLKDDVNSEVNKELNRLVHFTIKHVAEDIKHFAL-NRAIARMR------ELS 709
Query: 124 AAAAGEFSSDKISRGNDLFKIKIGDNVLLVKLRPFVRSFLEEASRLFEISVCTLGNRE 181
A + E S DKI D+ ++ G NVL+ L PF+ EE + LGN+E
Sbjct: 710 NAISAEISKDKI----DVKTVRHGFNVLVQLLNPFIPHITEEIWQ-------KLGNKE 756
>sp|C4K297|SYL_RICPU Leucine--tRNA ligase OS=Rickettsia peacockii (strain Rustic)
GN=leuS PE=3 SV=1
Length = 835
Score = 32.0 bits (71), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 53/119 (44%), Gaps = 18/119 (15%)
Query: 63 FDYIEKGLRYSIDEISRLKKRNTKNLLRMRKLHLVLDLDHTLLHSRLIGKLTSDEKYLEK 122
+Y+ K + D+++ + L+ H+ D+ H L +R I ++ E
Sbjct: 656 LEYMFKAIDSLKDDVNSEVNKELNRLVHFTIKHVAEDIKHFAL-NRAIARMR------EL 708
Query: 123 AAAAAGEFSSDKISRGNDLFKIKIGDNVLLVKLRPFVRSFLEEASRLFEISVCTLGNRE 181
+ A + E S DKI D+ ++ G NVL+ L PF+ EE + LGN+E
Sbjct: 709 SNAISAEISKDKI----DVKIVRHGFNVLVQLLNPFIPHITEEIWQ-------KLGNKE 756
>sp|Q9LN69|PPR50_ARATH Putative pentatricopeptide repeat-containing protein At1g19290
OS=Arabidopsis thaliana GN=At1g19290 PE=3 SV=2
Length = 904
Score = 32.0 bits (71), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 15/59 (25%), Positives = 33/59 (55%), Gaps = 6/59 (10%)
Query: 36 TICPHATILNGMCVVCDKLMDDSYGLCFDYIEKGLRYSIDEISRLKKRNTKNLLRMRKL 94
T+ + ++ G C + ++D +Y CF+ IEKG+ +++ S++ +L R+ K+
Sbjct: 610 TVATYGALITGWCNI--GMIDKAYATCFEMIEKGITLNVNICSKI----ANSLFRLDKI 662
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.135 0.398
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 137,206,883
Number of Sequences: 539616
Number of extensions: 5757317
Number of successful extensions: 14167
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 44
Number of HSP's that attempted gapping in prelim test: 14085
Number of HSP's gapped (non-prelim): 82
length of query: 369
length of database: 191,569,459
effective HSP length: 119
effective length of query: 250
effective length of database: 127,355,155
effective search space: 31838788750
effective search space used: 31838788750
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)