Your job contains 1 sequence.
>044164
MAATTVSKVPNFHDILPDAIMSNIFSLITDTRTRNAMSLVCLKWCKLERSTRKSLALRGN
IRDLNQVPVCFQAINNLDLSCLSPWGHPLLESSSNPSLLAKLLSHAFPSVVSLTIYARSP
LTLHFLAPEWPKLSHVKLVRWHQRFNAPIGYDFFALFEHCPSLSSIDLSHFYCWTEDLPT
AFELYPSIAASLSHLNLLVGHSFTEGYKSHELLSITSACPNLSQLLATCVFDHRFLGFVG
DETLLSIASNCPRLSLLHLADSTALSSNSSRADPNNNDEGYASEDARISPTALGDFFESL
PLLEELVLDVGNNVRDTWPALELLNSKCPRLKSLKLGQVHGICREIDSSMPAAGVALWKG
LESLSIKNSADLTDSALIAISLGCSNLTKFEVQGCNKITKMGMQIFARVLEKTLVDVRIS
SCKYLNTVCSLQALEPIRDRIQRLHVDCVWESVEQYSQDHEIRGESSSSSHEACGFKDFQ
TEKRIMMSEEEASLKKKAKCCDGSGNGFSSCSDTWTKLKYLSLWIAVGELLNPIRLAGLE
NCPILEEIQIKVVGDCRNQQKPVFMAEFGLNSLVNYPQLSRMHFDCGDAIGFALTAPRGY
ADLSLWERFYLNGIENLNLKELNYWPPQDMDVHQRSLSLPAAGLLSQCRSLRKLFIHGTA
NEHFMSFFLKIPTLRDVQLREDYYPAPENDTTSEMRVDSCYRFQDALNRRHIPD
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 044164
(714 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|Q5VMP0 - symbol:D3 "F-box/LRR-repeat MAX2 homol... 737 4.3e-153 3
TAIR|locus:2041499 - symbol:MAX2 "AT2G42620" species:3702... 1461 1.1e-149 1
UNIPROTKB|A9TAY1 - symbol:TIRB2 "TIRB2 TIR1-like auxin re... 123 2.3e-07 2
UNIPROTKB|A9SYG2 - symbol:TIRB1 "TIR1-like auxin receptor... 90 7.6e-07 3
ASPGD|ASPL0000017608 - symbol:grrA species:162425 "Emeric... 144 1.7e-06 2
TAIR|locus:2040105 - symbol:EBF1 "AT2G25490" species:3702... 129 1.9e-06 3
TAIR|locus:2083143 - symbol:VFB2 "AT3G50080" species:3702... 121 5.0e-06 3
UNIPROTKB|B9GFH2 - symbol:FBL3 "F-box family protein" spe... 95 5.5e-06 3
TAIR|locus:2155578 - symbol:SKIP2 "AT5G67250" species:370... 116 5.7e-06 3
CGD|CAL0002979 - symbol:GRR1 species:5476 "Candida albica... 141 6.0e-06 2
UNIPROTKB|Q5AK77 - symbol:GRR1 "Putative uncharacterized ... 141 6.0e-06 2
TAIR|locus:2166978 - symbol:AT5G23340 species:3702 "Arabi... 101 8.4e-06 2
UNIPROTKB|A4KA30 - symbol:TIR1 "Transport inhibitor respo... 95 1.2e-05 3
UNIPROTKB|Q0Z845 - symbol:TIR1 "Auxin-responsive factor T... 97 1.4e-05 2
UNIPROTKB|B9IBT6 - symbol:FBL2 "F-box family protein" spe... 102 1.4e-05 2
TAIR|locus:2149805 - symbol:AT5G01720 "AT5G01720" species... 136 2.1e-05 1
UNIPROTKB|B9I9W7 - symbol:FBL1 "F-box family protein" spe... 97 2.3e-05 3
UNIPROTKB|B6UHV2 - symbol:B6UHV2 "Transport inhibitor res... 88 6.0e-05 3
UNIPROTKB|B4FYV0 - symbol:B4FYV0 "Uncharacterized protein... 88 6.0e-05 3
WB|WBGene00015350 - symbol:C02F5.7 species:6239 "Caenorha... 126 0.00015 1
UNIPROTKB|Q58DG6 - symbol:FBXL20 "F-box/LRR-repeat protei... 124 0.00022 1
UNIPROTKB|Q96IG2 - symbol:FBXL20 "F-box/LRR-repeat protei... 124 0.00022 1
TAIR|locus:2088464 - symbol:AFB2 "AT3G26810" species:3702... 106 0.00027 2
TAIR|locus:2079721 - symbol:AT3G07550 "AT3G07550" species... 90 0.00028 3
UNIPROTKB|A5ARV5 - symbol:VITISV_038840 "Putative unchara... 80 0.00029 4
UNIPROTKB|Q2R3K5 - symbol:LOC_Os11g31620 "Transport inhib... 95 0.00030 2
RGD|621722 - symbol:Fbxl20 "F-box and leucine-rich repeat... 119 0.00033 1
TAIR|locus:2099237 - symbol:TIR1 "AT3G62980" species:3702... 89 0.00033 3
TAIR|locus:505006471 - symbol:AT4G15475 "AT4G15475" speci... 124 0.00037 1
MGI|MGI:1919444 - symbol:Fbxl20 "F-box and leucine-rich r... 122 0.00037 1
UNIPROTKB|B8Y9B4 - symbol:TIR1 "Transport inhibitor respo... 106 0.00053 2
TAIR|locus:2010366 - symbol:AFB3 "AT1G12820" species:3702... 101 0.00062 3
UNIPROTKB|B9N0V8 - symbol:FBL4 "F-box family protein" spe... 98 0.00062 3
UNIPROTKB|A2XSX3 - symbol:OsI_15707 "Putative uncharacter... 89 0.00066 2
UNIPROTKB|Q7XVM8 - symbol:LOC_Os04g32460 "Transport inhib... 89 0.00066 2
UNIPROTKB|B9SFB7 - symbol:RCOM_1095990 "TRANSPORT INHIBIT... 75 0.00077 3
RGD|1305813 - symbol:Fbxl7 "F-box and leucine-rich repeat... 114 0.00082 2
TAIR|locus:2125527 - symbol:GRH1 "AT4G03190" species:3702... 89 0.00097 3
UNIPROTKB|Q9AUH6 - symbol:TIR1 "F-box containing protein ... 91 0.0010 3
>UNIPROTKB|Q5VMP0 [details] [associations]
symbol:D3 "F-box/LRR-repeat MAX2 homolog" species:39947
"Oryza sativa Japonica Group" [GO:0007275 "multicellular organismal
development" evidence=IMP] InterPro:IPR001810 PROSITE:PS50181
GO:GO:0007275 GO:GO:0005634 GO:GO:0009926 GO:GO:0007568
GO:GO:0009414 SUPFAM:SSF81383 GO:GO:0009416 GO:GO:0000151
GO:GO:0009934 GO:GO:0010016 EMBL:AP006533 EMBL:AK065478
RefSeq:NP_001174608.1 UniGene:Os.18946 ProteinModelPortal:Q5VMP0
EnsemblPlants:LOC_Os06g06050.1 GeneID:9272469
KEGG:dosa:Os06t0154200-01 KEGG:osa:9272469 Gramene:Q5VMP0
eggNOG:NOG311391 HOGENOM:HOG000030535 OMA:MDLSLWE Uniprot:Q5VMP0
Length = 720
Score = 737 (264.5 bits), Expect = 4.3e-153, Sum P(3) = 4.3e-153
Identities = 158/358 (44%), Positives = 219/358 (61%)
Query: 100 AKLLSHAFPSVVSLTIYARSPLTLHFLAPEWP-KLSHVKLVRWHQRF-NAPIGYDFFALF 157
A L+ FP+V SL +Y R P TL L P W L VKLVRWHQR P G D L
Sbjct: 136 AARLAGCFPAVTSLAVYCRDPTTLANLTPHWQASLRRVKLVRWHQRPPTLPDGADLEPLL 195
Query: 158 EHCPSLSSIDLSHFYCWTEDLPTAFELYPSIAASLSHLNLLVGHSFTEGYKSHELLSITS 217
E C +L +DLS FYCWTED+ A +PS A+L+HL+L + + T+G+KS EL I +
Sbjct: 196 ETCAALRELDLSEFYCWTEDVVRALTTHPSATAALTHLDLGLAAA-TDGFKSSELGPIAA 254
Query: 218 ACPNLSQLLATCVFDHRFLGFVGDETLLSIASNCPRLSLLHLADSTALSSNSSRADPNNN 277
+CPNL +L+A C+F+ RF VGD+ LLS+A++CPRL++L L++ ++N R
Sbjct: 255 SCPNLRKLVAPCLFNPRFSDCVGDDALLSLATSCPRLTVLRLSEPFEAAANIQR------ 308
Query: 278 DEGYASEDARISPTALGDFFESLPLLEELVLDVGNNVRDTWPALELLNSKCPRLKSLKLG 337
E+A I+ L FF +LP LE+ +D+ +NV + PA+E L +CPR+K L LG
Sbjct: 309 ------EEAAITVAGLVAFFAALPALEDFTMDLQHNVLEAAPAMEALARRCPRIKFLTLG 362
Query: 338 QVHGICREIDSSMPAAGVALWKGLESLSIKNSADLTDSALIAISLGCSNLTKFEVQGCNK 397
G+C+ S + GVA+ GLESL +KN DLTD++L AI GC L KF + GC+
Sbjct: 363 SFQGLCKA--SWLHLDGVAVCGGLESLYMKNCQDLTDASLAAIGRGCRRLAKFGIHGCDL 420
Query: 398 ITKMGMQIFARVLEKTLVDVRISSCKYLNTVCSLQALEPIRDRIQRLHVDCVWESVEQ 455
+T G++ A L TL +V + C+ L+T L AL PIRDRI+ L ++CVW + EQ
Sbjct: 421 VTSAGIRRLAFTLRPTLKEVTVLHCRLLHTAECLTALSPIRDRIESLEINCVWNTTEQ 478
Score = 655 (235.6 bits), Expect = 4.3e-153, Sum P(3) = 4.3e-153
Identities = 123/203 (60%), Positives = 152/203 (74%)
Query: 514 TWTKLKYLSLWIAVGELLNPIRLAGLENCPILEEIQIKVVGDCRNQQKPVFMAEFGLNSL 573
+W L+ LSLW + G+LL+P+ AGL++CP+LEEI IKV GDCR +P FGL+ L
Sbjct: 518 SWEMLRSLSLWFSAGQLLSPLISAGLDSCPVLEEISIKVEGDCRTCPRPAPRTIFGLSDL 577
Query: 574 VNYPQLSRMHFDCGDAIGFALTAPRGYADLSLWERFYLNGIENLN-LKELNYWPPQDMDV 632
+P L++M D +A+G+ALTAP G DLSLWERFYL+GIE+L L EL+YWPPQD DV
Sbjct: 578 AGFPVLAKMKLDLSEAVGYALTAPTGQMDLSLWERFYLHGIESLQTLYELDYWPPQDKDV 637
Query: 633 HQRSLSLPAAGLLSQCRSLRKLFIHGTANEHFMSFFLKIPTLRDVQLREDYYPAPENDTT 692
H RSL+LPA GL+ +C LRKLFIHGT +EHFM+FFL IP LRD+QLREDYYPAPEND
Sbjct: 638 HHRSLTLPAVGLIQRCVGLRKLFIHGTTHEHFMTFFLSIPNLRDMQLREDYYPAPENDLM 697
Query: 693 -SEMRVDSCYRFQDALNRRHIPD 714
+EMR +S RF+ LN R I D
Sbjct: 698 FTEMRAESWLRFEVQLNSRQIDD 720
Score = 138 (53.6 bits), Expect = 4.3e-153, Sum P(3) = 4.3e-153
Identities = 30/76 (39%), Positives = 47/76 (61%)
Query: 16 LPDAIMSNIFSLITDTRTRNAMSLVCLKWCKLERSTRKSLALRGNIRDLNQVPVC----F 71
LP+ ++ +I S +TD R+R+ +L C + ER+TR L+LRG+ R + + F
Sbjct: 20 LPEPLLLHILSFLTDVRSRHRAALACGRMRAAERATRSELSLRGDPRSPGFLFLSHAFRF 79
Query: 72 QAINNLDLSCLSPWGH 87
A+ +LDLS +SPWGH
Sbjct: 80 PALEHLDLSLVSPWGH 95
Score = 49 (22.3 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 24/70 (34%), Positives = 34/70 (48%)
Query: 613 GIENLNLKELNYWPPQDMDVHQRSLSLPAAGLLSQCRSLRKLFIHG-----TANEHFMSF 667
G+E+L +K QD+ SL A G CR L K IHG +A ++F
Sbjct: 383 GLESLYMKNC-----QDLT----DASLAAIG--RGCRRLAKFGIHGCDLVTSAGIRRLAF 431
Query: 668 FLKIPTLRDV 677
L+ PTL++V
Sbjct: 432 TLR-PTLKEV 440
Score = 44 (20.5 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 17/60 (28%), Positives = 28/60 (46%)
Query: 335 KLGQVHGICREIDSSMPAAGVALWKGLESLSIKNSADLTDSALIAISL-GCSNLTKFEVQ 393
+LG+V+ + M + W+ L SLS+ SA S LI+ L C L + ++
Sbjct: 496 ELGEVYESAAKKCRYMEFDDLGSWEMLRSLSLWFSAGQLLSPLISAGLDSCPVLEEISIK 555
Score = 37 (18.1 bits), Expect = 1.9e-142, Sum P(3) = 1.9e-142
Identities = 6/15 (40%), Positives = 9/15 (60%)
Query: 70 CFQAINNLDLSCLSP 84
CF A+ +L + C P
Sbjct: 142 CFPAVTSLAVYCRDP 156
>TAIR|locus:2041499 [details] [associations]
symbol:MAX2 "AT2G42620" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0000151
"ubiquitin ligase complex" evidence=IPI] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0007568 "aging" evidence=IMP] [GO:0009934 "regulation of
meristem structural organization" evidence=IMP] [GO:0016567
"protein ubiquitination" evidence=TAS] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=ISS] [GO:0009414 "response to water
deprivation" evidence=IGI] [GO:0009926 "auxin polar transport"
evidence=IMP] [GO:0010016 "shoot system morphogenesis"
evidence=IMP] [GO:0009416 "response to light stimulus"
evidence=IMP] [GO:0009616 "virus induced gene silencing"
evidence=RCA] [GO:0010050 "vegetative phase change" evidence=RCA]
PROSITE:PS50181 UniPathway:UPA00143 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0009734 GO:GO:0009926 GO:GO:0009414
GO:GO:0016567 GO:GO:0009416 GO:GO:0019005 GO:GO:0009934
EMBL:AC007087 GO:GO:0010016 eggNOG:NOG311391 HOGENOM:HOG000030535
OMA:MDLSLWE EMBL:AF305597 IPI:IPI00543819 PIR:B84856
RefSeq:NP_565979.1 UniGene:At.21231 ProteinModelPortal:Q9SIM9
SMR:Q9SIM9 STRING:Q9SIM9 PaxDb:Q9SIM9 PRIDE:Q9SIM9
EnsemblPlants:AT2G42620.1 GeneID:818862 KEGG:ath:AT2G42620
GeneFarm:2277 TAIR:At2g42620 InParanoid:Q9SIM9 PhylomeDB:Q9SIM9
ProtClustDB:CLSN2688892 Genevestigator:Q9SIM9 Uniprot:Q9SIM9
Length = 693
Score = 1461 (519.4 bits), Expect = 1.1e-149, P = 1.1e-149
Identities = 341/732 (46%), Positives = 435/732 (59%)
Query: 16 LPDAIMSNIFSLITDTRTRNAMSLVCLKWCKLERSTRKSLALRGNIRDLNQVPVCFQAIN 75
LPD I+S I SL++D+R RN++SLV K+ LERSTR L +RGN RDL+ VP CF++I+
Sbjct: 9 LPDVILSTISSLVSDSRARNSLSLVSHKFLALERSTRSHLTIRGNARDLSLVPDCFRSIS 68
Query: 76 NLDLSCLSPWGHXXXXXX--XXXXXXAKLLSHAFPSVVSLTIYARSPLTLHFLAPEWPKL 133
+LDLS LSPWGH A L FP V SL +Y RSP +L L P+WP++
Sbjct: 69 HLDLSFLSPWGHTLLASLPIDHQNLLALRLKFCFPFVESLNVYTRSPSSLELLLPQWPRI 128
Query: 134 SHVKLVRWHQRFNAPIGYDFFALFEHCPSLSSIDLSHFYCWTEDLPTAFELYPSIAASLS 193
H+KL+RWHQR S I D FE SL
Sbjct: 129 RHIKLLRWHQR------------------ASQIPTGG------DFVPIFEHCGGFLESLD 164
Query: 194 HLNLLVGHSFTEGYKSHELLSITSACPNLSQL-LATCVFDHRFLGFVGDETLLSIASNCP 252
N + +TE LL L++L L T F G+ E ++SI +CP
Sbjct: 165 LSNF---YHWTEDLPP-VLLRYADVAARLTRLDLLTASFTE---GYKSSE-IVSITKSCP 216
Query: 253 RLSLLHLA------------DST--ALSSNS------------SRADPNNNDEGYASEDA 286
L +A D T A++++S S A+P G + D+
Sbjct: 217 NLKTFRVACTFDPRYFEFVGDETLSAVATSSPKLTLLHMVDTASLANPRAIP-GTEAGDS 275
Query: 287 RISPTALGDFFESLPLLEELVLDVGNNVRDTWPALELLNSKCPRLKSLKLGQVHGICREI 346
++ L + F LP LEELVLDVG +V+ + ALE LNSKC +L+ LKLGQ G+C
Sbjct: 276 AVTAGTLIEVFSGLPNLEELVLDVGKDVKHSGVALEALNSKCKKLRVLKLGQFQGVCSAT 335
Query: 347 DSSMPAAGVALWKGLESLSIKNSADLTDSALIAISLGCSNLTKFEVQGCNKITKMGMQIF 406
+ GVAL GL+SLSIKNS DLTD L+AI GC LT FE+QGC +T G++
Sbjct: 336 EWRR-LDGVALCGGLQSLSIKNSGDLTDMGLVAIGRGCCKLTTFEIQGCENVTVDGLRTM 394
Query: 407 ARVLEKTLVDVRISSCKYLNTVCSLQALEPIRDRIQRLHVDCVWESVEQYSQDHEIRG-- 464
+ KTL DVRIS CK L+T SL+A+EPI DRI+RLH+DCVW S+D E+ G
Sbjct: 395 VSLRSKTLTDVRISCCKNLDTAASLKAIEPICDRIKRLHIDCVWSG----SEDEEVEGRV 450
Query: 465 ESSSSSHEA--CGFKDFQTEKRIMMXXXXXXXXXXXXCCDGSGNGFSSCSDTWTKLKYLS 522
E+S + HE G++ +++KR C NGF S W KL+YLS
Sbjct: 451 ETSEADHEEEDDGYE--RSQKRCKYSFEEEH------CSTSDVNGFCSEDRVWEKLEYLS 502
Query: 523 LWIAVGELLNPIRLAGLENCPILEEIQIKVVGDCRNQQKPVFMAEFGLNSLVNYPQLSRM 582
LWI VGE L P+ + GL++CP LEEI+IK+ GDCR +++P EFGL+ L YP+LS+M
Sbjct: 503 LWINVGEFLTPLPMTGLDDCPNLEEIRIKIEGDCRGKRRPA-EPEFGLSCLALYPKLSKM 561
Query: 583 HFDCGDAIGFALTAPRGYADLSLWERFYLNGIENLNLKELNYWPPQDMDVHQRSLSLPAA 642
DCGD IGFALTAP DLSLWERF+L GI +L+L EL+YWPPQD DV+QRSLSLP A
Sbjct: 562 QLDCGDTIGFALTAPPMQMDLSLWERFFLTGIGSLSLSELDYWPPQDRDVNQRSLSLPGA 621
Query: 643 GLLSQCRSLRKLFIHGTANEHFMSFFLKIPTLRDVQLREDYYPAPENDTTSEMRVDSCYR 702
GLL +C +LRKLFIHGTA+EHFM+F L+IP LRDVQLR DYYPAPEND ++EMRV SC R
Sbjct: 622 GLLQECLTLRKLFIHGTAHEHFMNFLLRIPNLRDVQLRADYYPAPENDMSTEMRVGSCSR 681
Query: 703 FQDALNRRHIPD 714
F+D LN R+I D
Sbjct: 682 FEDQLNSRNIID 693
>UNIPROTKB|A9TAY1 [details] [associations]
symbol:TIRB2 "TIRB2 TIR1-like auxin receptor protein"
species:145481 "Physcomitrella patens subsp. patens" [GO:0000822
"inositol hexakisphosphate binding" evidence=ISS] [GO:0009734
"auxin mediated signaling pathway" evidence=ISS] InterPro:IPR001810
GO:GO:0009734 SUPFAM:SSF81383 GO:GO:0000822 ProtClustDB:CLSN2705023
EMBL:DS545085 RefSeq:XP_001775745.1 UniGene:Ppa.17296
ProteinModelPortal:A9TAY1 SMR:A9TAY1 EnsemblPlants:PP1S196_87V6.1
GeneID:5938978 KEGG:ppp:PHYPADRAFT_193240 Uniprot:A9TAY1
Length = 567
Score = 123 (48.4 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 50/220 (22%), Positives = 91/220 (41%)
Query: 15 ILPDAIMSNIFSLITDTRTRNAMSLVCLKWCKLERSTRKSLALRGNI--RDLNQVPVCFQ 72
+ PD ++ ++ +TD R RN++SLVC WC+ E +R+S+ + GN N + F
Sbjct: 4 VFPDEVLEHVLVFLTDHRDRNSVSLVCKAWCRTEGWSRRSVFI-GNCYAASPNLLLRRFP 62
Query: 73 AINNLDLSC---LSPWGHXXXXXXXXXXXXAKLLSHAFPSVVSLTIYAR--SPLTLHFLA 127
+ +L++ + +G + L+ + + L + S +L +A
Sbjct: 63 KLTSLEMKGRPRFTDFGLVPSNWGAFIQPWIEALAEHYAGLECLRLKRMTVSDESLRIIA 122
Query: 128 PEWPKLSHVKLVRWHQRFNAPIGYDFFALFEHCPSLSSIDLSHFYCWTEDLP--TAFELY 185
+P ++L F G + HC L +DL + TAF
Sbjct: 123 LAFPNFRSLRLASC-DGFTTD-GLQWIT--RHCRHLKELDLQENEIQVRSVGWLTAFPES 178
Query: 186 PSIAASLSHLNLLVGHSFTEGYKSHELLSITSACPNLSQL 225
+ SLS N+ + + Y H L ++ + CP L +L
Sbjct: 179 QTTLESLSFANI---QTPLDEYDFHSLYALVARCPRLKRL 215
Score = 78 (32.5 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 63/267 (23%), Positives = 110/267 (41%)
Query: 211 ELLSITSACPNLSQLLATCVFDHRFL--GFVGDETLLSIASNCPRLSLLHLADSTALSSN 268
+L ++ + ++ CV R L VGDE LL +A C +L+ L + SN
Sbjct: 294 DLSTVALTTADFTKSTTNCVKLRRLLVQDSVGDEGLLHVARCCKQLTELRVYPFNN-QSN 352
Query: 269 SSRADPNNNDEGYASEDAR--------ISPTALGDFFESLPLLEE----LVLDVGNNVRD 316
+ EG D R +S A+ F + P + +V +
Sbjct: 353 VTEKGFIAISEG--CRDMRKILYFCKQMSNAAMIQFARNCPNMTHFRMAMVTVYDRDCVT 410
Query: 317 TWPALELLNSKCPRLKSLKLGQVHGICREIDSSMPAAGVALWKGLESLSIKNSADLTDSA 376
P E + C K+L+ + G+ D + G+ K LE+LS+ + D TD
Sbjct: 411 NDPLDEGFGAVCKLCKNLRRLSLSGLLT--DKTFEYIGMYA-KKLETLSVAFAGD-TDLG 466
Query: 377 LIAISLGCSNLTKFEVQGCNKITKMGMQIFARVLEK--TLVDVRISSCKYLNTVCSLQAL 434
++ + GC L K EV+ C G + +EK ++ + +SSC+ +
Sbjct: 467 MVNVLDGCPALRKLEVRDC----PFGDEALLSGIEKYESMRALWMSSCQLTR-----DGV 517
Query: 435 EPIRDRIQRLHVDCVWESVEQYSQDHE 461
+ + D+ L+V+ + + VE+ S D E
Sbjct: 518 QFLADKNPNLNVEIIVD-VEK-SHDPE 542
Score = 65 (27.9 bits), Expect = 5.4e-06, Sum P(3) = 5.4e-06
Identities = 33/125 (26%), Positives = 54/125 (43%)
Query: 288 ISPTALGDFFESLPLLEELV-LDVGNNVRDTWPALELLNSKCPRLKSLKLGQVHGICREI 346
+SP L F P+ EL+ LD+ + V T + C +L+ L + G
Sbjct: 275 VSPRCLPTCF---PICNELITLDL-STVALTTADFTKSTTNCVKLRRLLVQDSVG----- 325
Query: 347 DSSMPAAGVALWKGLESLSI---KNSADLTDSALIAISLGCSNLTKFEVQGCNKITKMGM 403
D + K L L + N +++T+ IAIS GC ++ K + C +++ M
Sbjct: 326 DEGLLHVARCC-KQLTELRVYPFNNQSNVTEKGFIAISEGCRDMRKI-LYFCKQMSNAAM 383
Query: 404 QIFAR 408
FAR
Sbjct: 384 IQFAR 388
Score = 41 (19.5 bits), Expect = 5.4e-06, Sum P(3) = 5.4e-06
Identities = 12/40 (30%), Positives = 22/40 (55%)
Query: 517 KLKYLSLWIAVGELLNPIRLAGLENCPILEEIQIKVVGDC 556
KL+ LS+ A L + + L+ CP L +++++ DC
Sbjct: 451 KLETLSVAFAGDTDLGMVNV--LDGCPALRKLEVR---DC 485
>UNIPROTKB|A9SYG2 [details] [associations]
symbol:TIRB1 "TIR1-like auxin receptor" species:145481
"Physcomitrella patens subsp. patens" [GO:0000822 "inositol
hexakisphosphate binding" evidence=ISS] [GO:0009734 "auxin mediated
signaling pathway" evidence=ISS] InterPro:IPR001810 SMART:SM00256
GO:GO:0009734 SUPFAM:SSF81383 GO:GO:0000822 EMBL:DS545026
RefSeq:XP_001771423.1 ProteinModelPortal:A9SYG2 SMR:A9SYG2
EnsemblPlants:PP1S137_148V6.1 EnsemblPlants:PP1S137_148V6.2
GeneID:5934602 KEGG:ppp:PHYPADRAFT_189783 ProtClustDB:CLSN2705023
Uniprot:A9SYG2
Length = 570
Score = 90 (36.7 bits), Expect = 7.6e-07, Sum P(3) = 7.6e-07
Identities = 15/46 (32%), Positives = 29/46 (63%)
Query: 15 ILPDAIMSNIFSLITDTRTRNAMSLVCLKWCKLERSTRKSLALRGN 60
+ PD ++ ++ +T + RN++SLVC WC+ E +R+ + + GN
Sbjct: 4 LFPDEVLEHVLVFLTGHKDRNSVSLVCKAWCRAEGWSRRDVFI-GN 48
Score = 76 (31.8 bits), Expect = 7.6e-07, Sum P(3) = 7.6e-07
Identities = 36/132 (27%), Positives = 58/132 (43%)
Query: 319 PALELLNSKCPRLKSLKLGQVHGICREIDSSMPAAGVALWKGLESLSIKNSADLTDSALI 378
P E + C K L+ + G+ D + G K LE+LS+ + D TD ++
Sbjct: 413 PLDEGFGAVCKLCKDLRRLSLSGLLT--DKTFEYIGTYA-KKLETLSVAFAGD-TDMGMV 468
Query: 379 AISLGCSNLTKFEVQGC---NKITKMGMQIFA--RVLEKTLVDVRISSCKYLNTVCSLQA 433
+ GC L K EV+ C ++ G+ + R L + V I ++L +
Sbjct: 469 HVLDGCPVLRKLEVRDCPFGDEALLSGIDKYESMRALWMSSCRVTIDGVQFLASKNPNLN 528
Query: 434 LEPIRDRIQRLH 445
+E IRD I+ LH
Sbjct: 529 VEVIRD-IEMLH 539
Score = 74 (31.1 bits), Expect = 7.6e-07, Sum P(3) = 7.6e-07
Identities = 21/69 (30%), Positives = 31/69 (44%)
Query: 159 HCPSLSSIDLSHFYCWTEDLP--TAFELYPSIAASLSHLNLLVGHSFTEGYKSHELLSIT 216
HC L+ +DL + TAF P SL LN H+ + Y H L ++
Sbjct: 150 HCRHLTELDLQENEIQVRGVGWLTAF---PETQTSLESLNFANIHTPLDEYDFHSLYALV 206
Query: 217 SACPNLSQL 225
+ CP L++L
Sbjct: 207 TRCPKLTKL 215
Score = 63 (27.2 bits), Expect = 5.2e-06, Sum P(4) = 5.2e-06
Identities = 14/41 (34%), Positives = 24/41 (58%)
Query: 368 NSADLTDSALIAISLGCSNLTKFEVQGCNKITKMGMQIFAR 408
+ +++T+ L+AIS GC + K + C ++T M FAR
Sbjct: 349 DQSNVTEKGLVAISDGCREMRKI-LYFCKQMTNAAMIQFAR 388
Score = 49 (22.3 bits), Expect = 0.00012, Sum P(4) = 0.00012
Identities = 8/21 (38%), Positives = 15/21 (71%)
Query: 372 LTDSALIAISLGCSNLTKFEV 392
+T++A+I + CSN+T F +
Sbjct: 378 MTNAAMIQFARNCSNMTHFRM 398
Score = 43 (20.2 bits), Expect = 5.2e-06, Sum P(4) = 5.2e-06
Identities = 11/40 (27%), Positives = 23/40 (57%)
Query: 517 KLKYLSLWIAVGELLNPIRLAGLENCPILEEIQIKVVGDC 556
KL+ LS+ A + + + L+ CP+L +++++ DC
Sbjct: 451 KLETLSVAFAGDTDMGMVHV--LDGCPVLRKLEVR---DC 485
>ASPGD|ASPL0000017608 [details] [associations]
symbol:grrA species:162425 "Emericella nidulans"
[GO:0030437 "ascospore formation" evidence=IMP] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=IGI] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR001810 PROSITE:PS50181 GO:GO:0007126 GO:GO:0005737
SUPFAM:SSF81383 GO:GO:0030435 EMBL:BN001302 InterPro:IPR006553
SMART:SM00367 EMBL:AACD01000068 EMBL:DQ309327
ProteinModelPortal:C8V4D4 STRING:Q15I80
EnsemblFungi:CADANIAT00004464 OMA:CNRIRYI InterPro:IPR026940
PANTHER:PTHR23125:SF62 Uniprot:C8V4D4
Length = 585
Score = 144 (55.7 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 65/268 (24%), Positives = 117/268 (43%)
Query: 196 NLLVGHSFTEGYK--SHELLSITSACPNLSQLLATCVFDHRFLGFVGDETLLSIASNCPR 253
N L G + T K L++++ C L +L V V D+ +LS A NCP
Sbjct: 214 NRLQGLNITGCVKVTDDSLIAVSQNCRLLKRLKLNGVSQ------VTDKAILSFAQNCPS 267
Query: 254 LSLLHLADSTALSSNSSRA---DPNNNDEGYASEDARISPTALGDFFESLPLLEELVLDV 310
+ + L + +++ S A N E + I +A D + + +LD+
Sbjct: 268 ILEIDLQECKLVTNQSVTALMTTLQNLRELRLAHCTEIDDSAFLDLPRHIQMTSLRILDL 327
Query: 311 G--NNVRDTWPALELLNSKCPRLKSLKLGQVHGICREIDSSMPAAGVALWKGLESLSIKN 368
N+RD A+E + S PRL++L L + C+ I A L K L + + +
Sbjct: 328 TACENIRDE--AVERIVSSAPRLRNLVLAK----CKFITDRAVWAICKLGKNLHYVHLGH 381
Query: 369 SADLTDSALIAISLGCSNLTKFEVQGCNKITKMGMQIFARVLEKTLVDVRISSCKYLNTV 428
+++ DSA+I + C+ + ++ C+++T +Q A L K L + + C+ +
Sbjct: 382 CSNINDSAVIQLVKSCNRIRYIDLACCSRLTDRSVQQLA-TLPK-LRRIGLVKCQLITDA 439
Query: 429 CSLQALEPIRDR------IQRLHVD-CV 449
L P +D ++R+H+ CV
Sbjct: 440 SILALARPAQDHSVPCSSLERVHLSYCV 467
Score = 48 (22.0 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 11/29 (37%), Positives = 16/29 (55%)
Query: 16 LPDAIMSNIFSLITDTRTRNAMSLVCLKW 44
LP I+ +IFS ++ R + LVC W
Sbjct: 70 LPPEILISIFSKLSSPRDLLSCLLVCRIW 98
>TAIR|locus:2040105 [details] [associations]
symbol:EBF1 "AT2G25490" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IDA;TAS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=RCA;TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009723 "response to ethylene stimulus" evidence=IMP]
[GO:0010105 "negative regulation of ethylene mediated signaling
pathway" evidence=TAS] [GO:0042752 "regulation of circadian rhythm"
evidence=RCA] InterPro:IPR001810 Pfam:PF00646 PROSITE:PS50181
SMART:SM00256 UniPathway:UPA00143 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0009873 GO:GO:0009723
SUPFAM:SSF81383 GO:GO:0016567 GO:GO:0006511 GO:GO:0010105
InterPro:IPR006553 SMART:SM00367 EMBL:AC006300 EMBL:AJ609238
EMBL:AY072205 EMBL:AY091333 EMBL:AK317560 EMBL:AK229995
IPI:IPI00530647 PIR:A84649 RefSeq:NP_565597.1 UniGene:At.24288
UniGene:At.67740 ProteinModelPortal:Q9SKK0 SMR:Q9SKK0 IntAct:Q9SKK0
STRING:Q9SKK0 PRIDE:Q9SKK0 EnsemblPlants:AT2G25490.1 GeneID:817087
KEGG:ath:AT2G25490 TAIR:At2g25490 eggNOG:NOG300245
HOGENOM:HOG000238885 InParanoid:Q9SKK0 KO:K14515 OMA:KCAISDS
PhylomeDB:Q9SKK0 ProtClustDB:CLSN2686700 Genevestigator:Q9SKK0
Uniprot:Q9SKK0
Length = 628
Score = 129 (50.5 bits), Expect = 1.9e-06, Sum P(3) = 1.9e-06
Identities = 49/169 (28%), Positives = 76/169 (44%)
Query: 279 EGYASEDARISPTALGDFFESLPLLEELVLDVGNNVRDTWPALELLNSKCPRLKSLKLGQ 338
+G + D R++ A+G L +L + N+ + + L + CP L SL L
Sbjct: 129 DGKKATDVRLAAIAVGTAGRGG--LGKLSIRGSNSAKVSDLGLRSIGRSCPSLGSLSLWN 186
Query: 339 VHGICREIDSSMP--AAGVALWKGLESLSIKNSADLTDSALIAISLGCSNLTKFEVQGCN 396
V I D+ + A G A LE L + + +TD L+AI+ C NLT+ ++ C+
Sbjct: 187 VSTIT---DNGLLEIAEGCAQ---LEKLELNRCSTITDKGLVAIAKSCPNLTELTLEACS 240
Query: 397 KITKMGMQIFARVLEKTLVDVRISSCKYL----------NTVCSLQALE 435
+I G+ AR K L V I +C + NT CSL L+
Sbjct: 241 RIGDEGLLAIARSCSK-LKSVSIKNCPLVRDQGIASLLSNTTCSLAKLK 288
Score = 65 (27.9 bits), Expect = 1.9e-06, Sum P(3) = 1.9e-06
Identities = 15/46 (32%), Positives = 24/46 (52%)
Query: 8 KVPNFHDILPDAIMSNIFSLITDTRTRNAMSLVCLKWCKLERSTRK 53
K P D+LPD + IF ++ + R+A + V +W L S R+
Sbjct: 59 KKPVSIDVLPDECLFEIFRRLSGPQERSACAFVSKQWLTLVSSIRQ 104
Score = 41 (19.5 bits), Expect = 1.9e-06, Sum P(3) = 1.9e-06
Identities = 14/53 (26%), Positives = 23/53 (43%)
Query: 630 MDVHQRSLSLPAAGLLSQCRSLRKLFIH---GTANEHFMSFFLKIPTLRDVQL 679
+ + + LPA+ S C +LR L I G + + + P L D+ L
Sbjct: 425 LSIRDLTTGLPAS---SHCSALRSLSIRNCPGFGDANLAAIGKLCPQLEDIDL 474
>TAIR|locus:2083143 [details] [associations]
symbol:VFB2 "AT3G50080" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR001810
Pfam:PF00646 PROSITE:PS50181 SMART:SM00256 GO:GO:0005737
EMBL:CP002686 GenomeReviews:BA000014_GR SUPFAM:SSF81383
GO:GO:0004842 EMBL:AL132978 HOGENOM:HOG000240905
ProtClustDB:CLSN2681910 EMBL:BX822976 IPI:IPI00528697 PIR:T45861
RefSeq:NP_566928.1 UniGene:At.35535 ProteinModelPortal:Q9SN10
SMR:Q9SN10 PRIDE:Q9SN10 EnsemblPlants:AT3G50080.1 GeneID:824170
KEGG:ath:AT3G50080 TAIR:At3g50080 eggNOG:NOG306575
InParanoid:Q9SN10 OMA:CESIGFE PhylomeDB:Q9SN10
Genevestigator:Q9SN10 Uniprot:Q9SN10
Length = 522
Score = 121 (47.7 bits), Expect = 5.0e-06, Sum P(3) = 5.0e-06
Identities = 59/226 (26%), Positives = 96/226 (42%)
Query: 367 KNSADLTDSALIAISLGCSNLTKFEVQGCNKITKMGMQIFARVLEKTLVDVRISSCKY-- 424
+ S L+D AL +S+ CSNL + +++GC +IT +GM+ FAR K+L + SC +
Sbjct: 113 RRSFSLSDEALFIVSIRCSNLIRVKLRGCREITDLGMESFARNC-KSLRKLSCGSCTFGA 171
Query: 425 --LNTVCS-LQALEPIR-DRIQRLHVDCVWESVEQYSQDHEIRGESSSSSHEACGFKDFQ 480
+N + + LE + RI+ LH + E ++ S +R F
Sbjct: 172 KGINAMLEHCKVLEELSLKRIRGLHE--LAEPIK-LSLSASLRSVFLKELVNGQVFGSLV 228
Query: 481 TEKRIMMXXXXXXXXXXXXCCDGSGNGFSSCSDTWTKLKYLSLWIAVGELLNPIRLAGLE 540
+ + + +GNG SS ++ +L+ L + I L G+
Sbjct: 229 ATRTLKKVKIIRCLGNWDRVFEMNGNGNSSLTEI--RLERLQV--------TDIGLFGIS 278
Query: 541 NCPILEEIQIKVVGDCRNQQKPVFMAEFGLNSLVNYPQLSR-MHFD 585
C LE + I DC N GL S+V +L R +H D
Sbjct: 279 KCSNLETLHIVKTPDCSN---------LGLASVVERCKLLRKLHID 315
Score = 63 (27.2 bits), Expect = 5.0e-06, Sum P(3) = 5.0e-06
Identities = 19/69 (27%), Positives = 31/69 (44%)
Query: 16 LPDAIMSNIFSLITDTRTRNAMSLVCLKWCKLERSTRKSLALRGNIRDLNQVPVCFQ--- 72
LPD +++IF ++ R SLV +W ++ R L+L L +P F
Sbjct: 44 LPDDCLAHIFQFLS-AGDRKRCSLVSKRWLLVDGQNRHRLSLDAKSEILPFLPCIFNRFD 102
Query: 73 AINNLDLSC 81
++ L L C
Sbjct: 103 SVTKLALRC 111
Score = 44 (20.5 bits), Expect = 5.0e-06, Sum P(3) = 5.0e-06
Identities = 9/21 (42%), Positives = 14/21 (66%)
Query: 638 SLPAAGLLSQCRSLRKLFIHG 658
+L A ++ +C+ LRKL I G
Sbjct: 296 NLGLASVVERCKLLRKLHIDG 316
>UNIPROTKB|B9GFH2 [details] [associations]
symbol:FBL3 "F-box family protein" species:3694 "Populus
trichocarpa" [GO:0000822 "inositol hexakisphosphate binding"
evidence=ISS] [GO:0009734 "auxin mediated signaling pathway"
evidence=ISS] InterPro:IPR001810 SMART:SM00256 GO:GO:0005886
GO:GO:0009734 GO:GO:0048527 GO:GO:0048443 GO:GO:0010152
GO:GO:0010011 eggNOG:NOG259467 HOGENOM:HOG000239805
ProtClustDB:CLSN2687785 GO:GO:0000822 GO:GO:0002237 OMA:MEQNEED
GO:GO:0071249 GO:GO:0080022 EMBL:CM000337 RefSeq:XP_002300140.1
UniGene:Pth.11296 EnsemblPlants:POPTR_0001s33030.1 GeneID:7495822
KEGG:pop:POPTR_549767 Uniprot:B9GFH2
Length = 571
Score = 95 (38.5 bits), Expect = 5.5e-06, Sum P(3) = 5.5e-06
Identities = 17/44 (38%), Positives = 29/44 (65%)
Query: 17 PDAIMSNIFSLITDTRTRNAMSLVCLKWCKLERSTRKSLALRGN 60
PD ++ +IF +T R RN++S VC W K+E ++R+ + + GN
Sbjct: 5 PDEVLEHIFDFVTSQRDRNSVSQVCKPWYKIESTSRQKVFV-GN 47
Score = 70 (29.7 bits), Expect = 5.5e-06, Sum P(3) = 5.5e-06
Identities = 31/137 (22%), Positives = 52/137 (37%)
Query: 150 GYDFFALFEHCPSLSSIDLSHFYCWTEDLPTAFELYPSIAASLSHLNLLVGHSFTEGYKS 209
G + L HC L + + C ++ E+ S L + + F
Sbjct: 299 GTELIKLIRHCRKLQRLWILD--CIGDE---GLEVVASTCKHLQEIRVFPSDPFVGNAAV 353
Query: 210 HE--LLSITSACPNLSQLLATCVFDHRFLGFVGDETLLSIASNCPRLSLLHLADSTALSS 267
E L++++S C NL +L C + + L+++A NCP + L L
Sbjct: 354 TEVGLVALSSGCRNLHSILYFCQQ-------MTNAALITVAKNCPNFTRFRLC---ILDP 403
Query: 268 NSSRADPNNN-DEGYAS 283
AD N DEG+ +
Sbjct: 404 TKPDADTNQPLDEGFGA 420
Score = 67 (28.6 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05
Identities = 25/95 (26%), Positives = 38/95 (40%)
Query: 176 EDLPTAFELYPSIAASLSHLNLLVGHSFTEGYKSHELLSITSACPNLSQLLATCVFDHRF 235
E P + I +L+ LNL S+ G EL+ + C L +L
Sbjct: 270 EAAPQCLSAFHLICPNLTSLNL----SYAPGIHGTELIKLIRHCRKLQRLW--------I 317
Query: 236 LGFVGDETLLSIASNCPRLSLLHLADSTALSSNSS 270
L +GDE L +AS C L + + S N++
Sbjct: 318 LDCIGDEGLEVVASTCKHLQEIRVFPSDPFVGNAA 352
Score = 66 (28.3 bits), Expect = 5.5e-06, Sum P(3) = 5.5e-06
Identities = 23/70 (32%), Positives = 31/70 (44%)
Query: 361 LESLSIKNSADLTDSALIAISLGCSNLTKFEVQGC---NKITKM--GMQIFARVLEKTLV 415
LE LSI + D TD + + GC L K E++ C N M G R L +
Sbjct: 452 LEMLSIAFAGD-TDKGMQYLLNGCKKLRKLEIRDCPFGNAALLMDVGKYETMRSLWMSSC 510
Query: 416 DVRISSCKYL 425
D+ + CK L
Sbjct: 511 DITLGGCKSL 520
>TAIR|locus:2155578 [details] [associations]
symbol:SKIP2 "AT5G67250" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001810 Pfam:PF00646 PROSITE:PS50181
SMART:SM00256 UniPathway:UPA00143 GO:GO:0005634 GO:GO:0005737
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0004842 EMBL:AB020742
EMBL:AB025614 HOGENOM:HOG000240905 ProtClustDB:CLSN2681910
EMBL:AF263378 EMBL:AY056152 EMBL:BT002473 EMBL:BT008886
EMBL:AK226338 IPI:IPI00542641 RefSeq:NP_569047.1 UniGene:At.20927
UniGene:At.48122 ProteinModelPortal:Q9FE83 SMR:Q9FE83 IntAct:Q9FE83
STRING:Q9FE83 PaxDb:Q9FE83 PRIDE:Q9FE83 EnsemblPlants:AT5G67250.1
GeneID:836860 KEGG:ath:AT5G67250 TAIR:At5g67250 eggNOG:NOG251477
InParanoid:Q9FE83 OMA:RSVCLKD PhylomeDB:Q9FE83
Genevestigator:Q9FE83 Uniprot:Q9FE83
Length = 527
Score = 116 (45.9 bits), Expect = 5.7e-06, Sum P(3) = 5.7e-06
Identities = 23/58 (39%), Positives = 37/58 (63%)
Query: 367 KNSADLTDSALIAISLGCSNLTKFEVQGCNKITKMGMQIFARVLEKTLVDVRISSCKY 424
+ S L+D AL IS+ C NLT+ +++GC +IT +GM+ FA+ K L + + SC +
Sbjct: 115 RKSVSLSDEALAMISVRCLNLTRVKLRGCREITDLGMEDFAKNC-KNLKKLSVGSCNF 171
Score = 67 (28.6 bits), Expect = 5.7e-06, Sum P(3) = 5.7e-06
Identities = 20/74 (27%), Positives = 35/74 (47%)
Query: 11 NFHDILPDAIMSNIFSLITDTRTRNAMSLVCLKWCKLERSTRKSLAL--RGNIRD-LNQV 67
+F LPD ++++F + R SLVC +W ++ +R L+L + I L +
Sbjct: 41 DFTGDLPDECLAHVFQFL-GAGDRKRCSLVCKRWLLVDGQSRHRLSLDAKDEISSFLTSM 99
Query: 68 PVCFQAINNLDLSC 81
F ++ L L C
Sbjct: 100 FNRFDSVTKLALRC 113
Score = 45 (20.9 bits), Expect = 5.7e-06, Sum P(3) = 5.7e-06
Identities = 8/15 (53%), Positives = 12/15 (80%)
Query: 537 AGLENCPILEEIQIK 551
A LE+C +LEE+ +K
Sbjct: 178 AMLEHCKLLEELSVK 192
>CGD|CAL0002979 [details] [associations]
symbol:GRR1 species:5476 "Candida albicans" [GO:0007124
"pseudohyphal growth" evidence=IMP] [GO:0000082 "G1/S transition of
mitotic cell cycle" evidence=IGI] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000142 "cellular bud neck contractile ring"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0019005
"SCF ubiquitin ligase complex" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0031146 "SCF-dependent
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0000751 "cell cycle arrest in response to
pheromone" evidence=IEA] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] [GO:0071406 "cellular response to
methylmercury" evidence=IEA] [GO:0030674 "protein binding,
bridging" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] InterPro:IPR001810 PROSITE:PS50181
CGD:CAL0002979 GO:GO:0000082 GO:GO:0007124 EMBL:AACQ01000012
EMBL:AACQ01000011 eggNOG:NOG300245 KO:K03360 RefSeq:XP_721853.1
RefSeq:XP_722013.1 STRING:Q5AK77 GeneID:3636297 GeneID:3636392
KEGG:cal:CaO19.11426 KEGG:cal:CaO19.3944 Uniprot:Q5AK77
Length = 780
Score = 141 (54.7 bits), Expect = 6.0e-06, Sum P(2) = 6.0e-06
Identities = 65/262 (24%), Positives = 109/262 (41%)
Query: 192 LSHLNLLVGHSFTEGYKSHELLSITSACPNLSQL-LATCVFDHRFLGFVGDETLLSIASN 250
+ LNL SF ELLS+ CP L +L L C R+ + + +
Sbjct: 181 IKRLNL----SFMTKLVDDELLSLFIGCPRLERLTLVNCAKLTRY-------PITQVLNG 229
Query: 251 CPRLSLLHLADSTALSSNSSRADPNNND--EG-YASEDARISPTALGDFFESLPLLEELV 307
C RL + L T + + A NN +G YA +S A+ S P+L+ +
Sbjct: 230 CERLQSIDLTGVTDIHDDIINALANNCPRLQGLYAPGCGNVSEEAIIKLLRSCPMLKRVK 289
Query: 308 LDVGNNVRDTWPALELLNSKCPRLKSLKLGQVHGICREI-DSSMPAAGVALWKGLESLSI 366
+ N+ D ++ ++ C L + L HG C + D + + + L + L I
Sbjct: 290 FNSSTNITDE--SILVMYENCKSLVEIDL---HG-CENVTDKYLKSIFLDLTQ-LREFRI 342
Query: 367 KNSADLTDSALIAISLG--CSNLTKFEVQGCNKITKMGMQIFARVLEKTLVDVRISSCKY 424
N+ +TD +I G L ++ GCN IT ++ + L +V +S C
Sbjct: 343 SNAPGITDKLFESIPEGHILEKLRIIDITGCNAITDRLVEKLVSCAPR-LRNVVLSKCMQ 401
Query: 425 LNTVCSLQALEPIRDRIQRLHV 446
+ T SL+AL + + +H+
Sbjct: 402 I-TDASLRALSQLGRSLHYIHL 422
Score = 49 (22.3 bits), Expect = 6.0e-06, Sum P(2) = 6.0e-06
Identities = 11/30 (36%), Positives = 17/30 (56%)
Query: 611 LNGIENLNLKELNYW---PPQDMDVHQRSL 637
L GI + +E+ + PP D + HQ+SL
Sbjct: 528 LTGISSFLRREITQYCREPPSDFNEHQKSL 557
Score = 40 (19.1 bits), Expect = 5.0e-05, Sum P(2) = 5.0e-05
Identities = 7/18 (38%), Positives = 13/18 (72%)
Query: 608 RFYLNGIENLNLKELNYW 625
R +LNG +++ +E+N W
Sbjct: 598 RRFLNGDIDMDEEEMNIW 615
>UNIPROTKB|Q5AK77 [details] [associations]
symbol:GRR1 "Putative uncharacterized protein GRR1"
species:237561 "Candida albicans SC5314" [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=IGI] [GO:0007124
"pseudohyphal growth" evidence=IMP] InterPro:IPR001810
PROSITE:PS50181 CGD:CAL0002979 GO:GO:0000082 GO:GO:0007124
EMBL:AACQ01000012 EMBL:AACQ01000011 eggNOG:NOG300245 KO:K03360
RefSeq:XP_721853.1 RefSeq:XP_722013.1 STRING:Q5AK77 GeneID:3636297
GeneID:3636392 KEGG:cal:CaO19.11426 KEGG:cal:CaO19.3944
Uniprot:Q5AK77
Length = 780
Score = 141 (54.7 bits), Expect = 6.0e-06, Sum P(2) = 6.0e-06
Identities = 65/262 (24%), Positives = 109/262 (41%)
Query: 192 LSHLNLLVGHSFTEGYKSHELLSITSACPNLSQL-LATCVFDHRFLGFVGDETLLSIASN 250
+ LNL SF ELLS+ CP L +L L C R+ + + +
Sbjct: 181 IKRLNL----SFMTKLVDDELLSLFIGCPRLERLTLVNCAKLTRY-------PITQVLNG 229
Query: 251 CPRLSLLHLADSTALSSNSSRADPNNND--EG-YASEDARISPTALGDFFESLPLLEELV 307
C RL + L T + + A NN +G YA +S A+ S P+L+ +
Sbjct: 230 CERLQSIDLTGVTDIHDDIINALANNCPRLQGLYAPGCGNVSEEAIIKLLRSCPMLKRVK 289
Query: 308 LDVGNNVRDTWPALELLNSKCPRLKSLKLGQVHGICREI-DSSMPAAGVALWKGLESLSI 366
+ N+ D ++ ++ C L + L HG C + D + + + L + L I
Sbjct: 290 FNSSTNITDE--SILVMYENCKSLVEIDL---HG-CENVTDKYLKSIFLDLTQ-LREFRI 342
Query: 367 KNSADLTDSALIAISLG--CSNLTKFEVQGCNKITKMGMQIFARVLEKTLVDVRISSCKY 424
N+ +TD +I G L ++ GCN IT ++ + L +V +S C
Sbjct: 343 SNAPGITDKLFESIPEGHILEKLRIIDITGCNAITDRLVEKLVSCAPR-LRNVVLSKCMQ 401
Query: 425 LNTVCSLQALEPIRDRIQRLHV 446
+ T SL+AL + + +H+
Sbjct: 402 I-TDASLRALSQLGRSLHYIHL 422
Score = 49 (22.3 bits), Expect = 6.0e-06, Sum P(2) = 6.0e-06
Identities = 11/30 (36%), Positives = 17/30 (56%)
Query: 611 LNGIENLNLKELNYW---PPQDMDVHQRSL 637
L GI + +E+ + PP D + HQ+SL
Sbjct: 528 LTGISSFLRREITQYCREPPSDFNEHQKSL 557
Score = 40 (19.1 bits), Expect = 5.0e-05, Sum P(2) = 5.0e-05
Identities = 7/18 (38%), Positives = 13/18 (72%)
Query: 608 RFYLNGIENLNLKELNYW 625
R +LNG +++ +E+N W
Sbjct: 598 RRFLNGDIDMDEEEMNIW 615
>TAIR|locus:2166978 [details] [associations]
symbol:AT5G23340 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] EMBL:CP002688
GenomeReviews:BA000015_GR InterPro:IPR006553 SMART:SM00367
EMBL:AB007648 eggNOG:NOG300245 KO:K10268 EMBL:AY054268
EMBL:AY133522 EMBL:AK226277 IPI:IPI00524374 RefSeq:NP_197725.1
UniGene:At.21636 UniGene:At.71067 ProteinModelPortal:Q9FMW7
SMR:Q9FMW7 IntAct:Q9FMW7 STRING:Q9FMW7 PaxDb:Q9FMW7 PRIDE:Q9FMW7
EnsemblPlants:AT5G23340.1 GeneID:832398 KEGG:ath:AT5G23340
TAIR:At5g23340 HOGENOM:HOG000030079 InParanoid:Q9FMW7 OMA:DSCEQAG
PhylomeDB:Q9FMW7 ProtClustDB:CLSN2686136 Genevestigator:Q9FMW7
Uniprot:Q9FMW7
Length = 405
Score = 101 (40.6 bits), Expect = 8.4e-06, Sum P(2) = 8.4e-06
Identities = 33/136 (24%), Positives = 60/136 (44%)
Query: 288 ISPTALGDFFESLPLLEELVLDVGNNVRDTWPALELLNSKCPRLKSLKLGQVHGICREI- 346
I+ T L L LL+ L + + D L + C L++L L G CR I
Sbjct: 111 ITDTGLASIGRCLSLLQFLDVSYCRKLSDK--GLSAVAEGCHDLRALHLA---G-CRFIT 164
Query: 347 DSSMPAAGVALWKGLESLSIKNSADLTDSALIAISLGCSNLTKFEVQGCNKITKMGMQIF 406
D S+ + + LE+L ++ ++TDS L + GC + ++ C+ + G+
Sbjct: 165 DESLKSLSERC-RDLEALGLQGCTNITDSGLADLVKGCRKIKSLDINKCSNVGDAGVSSV 223
Query: 407 ARVLEKTLVDVRISSC 422
A+ +L +++ C
Sbjct: 224 AKACASSLKTLKLLDC 239
Score = 101 (40.6 bits), Expect = 8.4e-06, Sum P(2) = 8.4e-06
Identities = 67/261 (25%), Positives = 109/261 (41%)
Query: 187 SIAASLSHLNLLVGHSFTEGYKSHELLSITSACPNLSQL-LATCVFDHRFLGFVGDETLL 245
SI LS L L S+ L ++ C +L L LA C F+ DE+L
Sbjct: 118 SIGRCLSLLQFL-DVSYCRKLSDKGLSAVAEGCHDLRALHLAGC-------RFITDESLK 169
Query: 246 SIASNCPRLSLLHLADSTALSSNSSRADP-------NNNDEGYASE--DARISPTA--LG 294
S++ C L L L T ++ +S AD + D S DA +S A
Sbjct: 170 SLSERCRDLEALGLQGCTNIT-DSGLADLVKGCRKIKSLDINKCSNVGDAGVSSVAKACA 228
Query: 295 DFFESLPLLEELVLDVGNNVRDTWPALELLNSKCPRLKSLKLGQVHGICREI-DSSMPAA 353
++L LL+ VGN ++ L C L++L +G G CR+I D S+
Sbjct: 229 SSLKTLKLLD--CYKVGNE------SISSLAQFCKNLETLIIG---G-CRDISDESIMLL 276
Query: 354 GVALWKGLESLSIKNSADLTDSALIAISLGCSNLTKFEVQGCNKITKMGMQIFARVLEKT 413
+ L++L + +++DS+L I C NL ++ C ++T +
Sbjct: 277 ADSCKDSLKNLRMDWCLNISDSSLSCILKQCKNLEALDIGCCEEVTDTAFRDLGSDDVLG 336
Query: 414 LVDVRISSCKYLNTVCSLQAL 434
L +++S+C + TV + L
Sbjct: 337 LKVLKVSNCTKI-TVTGIGKL 356
Score = 94 (38.1 bits), Expect = 4.8e-05, Sum P(2) = 4.8e-05
Identities = 36/173 (20%), Positives = 78/173 (45%)
Query: 288 ISPTALGDFFESLPLLEELVLDVGNNVRDTWPALELLNSKCPRLKSLKLGQVHGICREI- 346
I+ +L E LE L L N+ D+ A +L+ C ++KSL + + C +
Sbjct: 163 ITDESLKSLSERCRDLEALGLQGCTNITDSGLA-DLVKG-CRKIKSLDINK----CSNVG 216
Query: 347 DSSMPAAGVALWKGLESLSIKNSADLTDSALIAISLGCSNLTKFEVQGCNKITKMGMQIF 406
D+ + + A L++L + + + + ++ +++ C NL + GC I+ + +
Sbjct: 217 DAGVSSVAKACASSLKTLKLLDCYKVGNESISSLAQFCKNLETLIIGGCRDISDESIMLL 276
Query: 407 ARVLEKTLVDVRISSCKYLNTVCSLQALEPIRDRIQRLHVDCVWESVEQYSQD 459
A + +L ++R+ C ++ SL + ++ L + C E + +D
Sbjct: 277 ADSCKDSLKNLRMDWCLNISD-SSLSCILKQCKNLEALDIGCCEEVTDTAFRD 328
Score = 82 (33.9 bits), Expect = 8.4e-06, Sum P(2) = 8.4e-06
Identities = 20/68 (29%), Positives = 32/68 (47%)
Query: 13 HDILPDAIMSNIFSLITDTRTRNAMSLVCLKWCKLERSTRKSLALRGNIRDLNQVPVCFQ 72
++ L D + + S + + + LVC +W L+ + RK LA R L ++ F
Sbjct: 7 NEALTDDELRWVLSRLDSDKDKEVFGLVCKRWLNLQSTDRKKLAARAGPHMLRRLASRFT 66
Query: 73 AINNLDLS 80
I LDLS
Sbjct: 67 QIVELDLS 74
>UNIPROTKB|A4KA30 [details] [associations]
symbol:TIR1 "Transport inhibitor response 1" species:3635
"Gossypium hirsutum" [GO:0000822 "inositol hexakisphosphate
binding" evidence=ISS] [GO:0009734 "auxin mediated signaling
pathway" evidence=ISS] InterPro:IPR001810 SMART:SM00256
GO:GO:0009734 GO:GO:0000822 EMBL:DQ659621 ProteinModelPortal:A4KA30
SMR:A4KA30 Uniprot:A4KA30
Length = 586
Score = 95 (38.5 bits), Expect = 1.2e-05, Sum P(3) = 1.2e-05
Identities = 17/44 (38%), Positives = 29/44 (65%)
Query: 17 PDAIMSNIFSLITDTRTRNAMSLVCLKWCKLERSTRKSLALRGN 60
PD ++ ++FS I + RNA+S+VC W ++ER R+ + + GN
Sbjct: 10 PDEVLEHVFSFIQSDKDRNAVSMVCKSWYEIERWCRRKVFV-GN 52
Score = 82 (33.9 bits), Expect = 3.0e-05, Sum P(3) = 3.0e-05
Identities = 65/263 (24%), Positives = 106/263 (40%)
Query: 167 DLSHFYCWTEDLP-----TAFELYPSIAASLSHLNLLVGHSFTEGYKSHELLSITSACPN 221
+++ Y W E++ E IA S + +LV S EG+ + L +I ++C N
Sbjct: 99 EMAGAYPWLEEIRLKRMVVTDESLELIAKSFKNFKVLVLSS-CEGFSTDGLAAIAASCKN 157
Query: 222 LSQL-LATCVFDHRFLGFVGD--ETLLSIASNCPRLSLLHLADSTALSSNSSRADPNNND 278
L +L L C D ++ ET S+ S +S L +D + S+ N
Sbjct: 158 LKELDLRDCEVDDLSAHWLSHFPETYTSLVSL--NISCLG-SDEASFSALERLVHRCTNL 214
Query: 279 EGYASEDARISPTALGDFFESLPLLEELVLDVGN-NVR-DTWPALELLNSKCPRLKSLKL 336
+ A + + + P L E +VR D + L + S C LKSL
Sbjct: 215 KTLRLNRA-VPLDKIANILRHAPQLVEFGTGTYTADVRPDVYSDLAGVLSSCKELKSLS- 272
Query: 337 GQVHGICREIDSSMPAAGVALWKGLESLSIKNSADLTDSALIAISLGCSNLTKFEVQGCN 396
G I +PA K L SL++ + A + LI + C NL + V +
Sbjct: 273 ----GFWDVIPDYLPAIYPVCSK-LTSLNL-SYATIQSPDLIKLVSHCPNLQRLLV--LD 324
Query: 397 KITKMGMQIFARVLEKTLVDVRI 419
I G+++ A K L ++R+
Sbjct: 325 YIEDSGLEVLASSC-KDLQELRV 346
Score = 73 (30.8 bits), Expect = 1.2e-05, Sum P(3) = 1.2e-05
Identities = 26/93 (27%), Positives = 46/93 (49%)
Query: 359 KGLESLSIKNSADLTDSALIAISLGCSNLTKFEVQGCNKITKMGMQIFARVLEKTLVDVR 418
K LE LS+ + D +D L + GC +L K E++ C K + A++ +T+ +
Sbjct: 457 KKLEMLSVAFAGD-SDLGLHHVLSGCESLRKLEIRDCPFGDKALLANAAKL--ETMRSLW 513
Query: 419 ISSCKYLNTVCSLQALEPIRDRIQRLHVDCVWE 451
+SSC C L + ++ RL+V+ + E
Sbjct: 514 MSSCAVSFAACKL-----LGQKMPRLNVEVIDE 541
Score = 60 (26.2 bits), Expect = 1.2e-05, Sum P(3) = 1.2e-05
Identities = 28/112 (25%), Positives = 46/112 (41%)
Query: 152 DFFALFEHCPSLSSIDLSHFYCWTEDLPTAFELYPSIAASLSHLNLLVGHSF-TEGYKS- 209
D L HCP+L + + + ED + E+ S L L + F E S
Sbjct: 306 DLIKLVSHCPNLQRLLVLDYI---ED--SGLEVLASSCKDLQELRVFPSDPFGAEPNVSL 360
Query: 210 --HELLSITSACPNLSQLLATCVFDHRFLGFVGDETLLSIASNCPRLSLLHL 259
L++++ CP L +L C R + +E L++IA + P + L
Sbjct: 361 TEQGLVAVSLGCPKLQSVLYFC---RR----MSNEALVTIARSRPNFTRFRL 405
Score = 47 (21.6 bits), Expect = 3.0e-05, Sum P(3) = 3.0e-05
Identities = 34/144 (23%), Positives = 62/144 (43%)
Query: 530 LLNPIRLAGLE----NCPILEEIQIKVVGDCRNQQKPVFMAEFGLNSL-VNYPQLSRMHF 584
+L+ I +GLE +C L+E+++ D + V + E GL ++ + P+L + +
Sbjct: 322 VLDYIEDSGLEVLASSCKDLQELRV-FPSDPFGAEPNVSLTEQGLVAVSLGCPKLQSVLY 380
Query: 585 DCGDAIGFAL-TAPRGYADLSLWERFYLNGIENLNLKELNYWPPQDMDVHQRSLSLPAAG 643
C AL T R + + RF L IE K +Y + +DV
Sbjct: 381 FCRRMSNEALVTIARSRPNFT---RFRLCIIEP---KTADYLTLEPLDVG-------FGA 427
Query: 644 LLSQCRSLRKLFIHGTANEHFMSF 667
++ C+ LR+L + G + +
Sbjct: 428 IVQYCKDLRRLSLSGLLTDRVFEY 451
Score = 42 (19.8 bits), Expect = 9.3e-05, Sum P(3) = 9.3e-05
Identities = 12/36 (33%), Positives = 20/36 (55%)
Query: 644 LLSQCRSLRKLFIHGT--ANEHFMSFFLKIPTLRDV 677
+LS C SLRKL I ++ ++ K+ T+R +
Sbjct: 477 VLSGCESLRKLEIRDCPFGDKALLANAAKLETMRSL 512
>UNIPROTKB|Q0Z845 [details] [associations]
symbol:TIR1 "Auxin-responsive factor TIR1-like protein"
species:118781 "Populus tomentosa" [GO:0000822 "inositol
hexakisphosphate binding" evidence=ISS] [GO:0009734 "auxin mediated
signaling pathway" evidence=ISS] InterPro:IPR001810 SMART:SM00256
GO:GO:0009734 GO:GO:0000822 EMBL:DQ666686 ProteinModelPortal:Q0Z845
SMR:Q0Z845 Uniprot:Q0Z845
Length = 571
Score = 97 (39.2 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 17/44 (38%), Positives = 29/44 (65%)
Query: 17 PDAIMSNIFSLITDTRTRNAMSLVCLKWCKLERSTRKSLALRGN 60
PD ++ ++F +T R RN++S VC W K+E S+R+ + + GN
Sbjct: 5 PDEVLEHVFDFVTSQRDRNSVSQVCKPWYKIESSSRQKVFV-GN 47
Score = 88 (36.0 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 78/323 (24%), Positives = 127/323 (39%)
Query: 158 EHCPSLSSIDLSHFYCWTEDLPTAFELYPSIAASLSHLNLLVGHSFTEGYKSHELLSITS 217
+ C S+ S LS F E P + I +L+ LNL S+ G EL+ +
Sbjct: 257 QKCKSVKS--LSGFL---EAAPQCLPAFHLICPNLTSLNL----SYAPGIHGTELIKLIR 307
Query: 218 ACPNLSQLLATCVFDHRFLGFVGDETLLSIASNCPRL-------SLLHLADSTALSSNS- 269
C L +L L +GDE L +AS C L S LH+ D+
Sbjct: 308 HCRKLQRLW--------ILDCIGDEGLEVVASTCKDLQEIRVFPSDLHVGDAAVTEVGLV 359
Query: 270 --SRADPNNNDEGYASEDARISPTALGDFFESLPLLEEL---VLDVGNNVRDT-WPALEL 323
S PN + Y + +++ AL ++ P +LD DT P E
Sbjct: 360 ALSSGCPNLHSILYFCQ--QMTNAALITVAKNCPNFTRFRLCILDPTKPDGDTNQPLDEG 417
Query: 324 LNSKCPRLKSLKLGQVHGICREIDSSMPAAGVALWKGLESLSIKNSADLTDSALIAISLG 383
+ K L+ + G+ D G+ + LE LSI + D TD + + G
Sbjct: 418 FGAIVHLCKGLRRLSMSGLLT--DQVFLYIGMYA-EQLEMLSIAFAGD-TDKGMQYLLSG 473
Query: 384 CSNLTKFEVQGCNKITKMGMQIFARVLEKTLVDVRISSCKYLNTVCSLQALEPIRDRIQR 443
C L K E++ C + + E T+ + +SSC+ +L + ++ R
Sbjct: 474 CKKLRKLEIRDC-PFGNAALLMDVGKYE-TMRSLWMSSCEV-----TLGGCRSLAKKMPR 526
Query: 444 LHVDCVWESVEQ-YSQDHEIRGE 465
L+V+ + E+ + S D ++ E
Sbjct: 527 LNVEIINENDQMDASADDTLKVE 549
>UNIPROTKB|B9IBT6 [details] [associations]
symbol:FBL2 "F-box family protein" species:3694 "Populus
trichocarpa" [GO:0000822 "inositol hexakisphosphate binding"
evidence=ISS] [GO:0009734 "auxin mediated signaling pathway"
evidence=ISS] InterPro:IPR001810 SMART:SM00256 GO:GO:0009734
GO:GO:0048443 GO:GO:0010152 GO:GO:0010011 GO:GO:0010311
HOGENOM:HOG000239805 GO:GO:0019005 GO:GO:0000822 GO:GO:0002237
GO:GO:0016036 ProtClustDB:CLSN2689313 eggNOG:NOG267823
EMBL:CM000350 RefSeq:XP_002321336.1
EnsemblPlants:POPTR_0020s00280.1 GeneID:7464454
KEGG:pop:POPTR_573509 Uniprot:B9IBT6
Length = 584
Score = 102 (41.0 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 19/52 (36%), Positives = 33/52 (63%)
Query: 9 VPNFHDILPDAIMSNIFSLITDTRTRNAMSLVCLKWCKLERSTRKSLALRGN 60
+PN P+ ++ ++ S IT+ + RNA+S+VC W ++ER RK + + GN
Sbjct: 1 MPNKASTFPEEVLEHVLSFITNDKDRNAVSVVCKSWYEIERWCRKRIFV-GN 51
Score = 83 (34.3 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 80/361 (22%), Positives = 148/361 (40%)
Query: 108 PSVVSLTIYARSPLT-LHFLAPEWPKLSHVKLVRWHQRFNAPIGYDFFALFEHCPSLSSI 166
P + +L + P+ L L + P+L + + + I + F C L S
Sbjct: 210 PDLKNLQLNHAVPVERLAKLIRQAPQLVELGTGEFSAKLQPEIFSNLAGAFSVCKELRS- 268
Query: 167 DLSHFYCWTEDLPTAF--ELYPSIAASLSHLNLLVGHSFTEGYKSHELLSITSACPNLSQ 224
LS F W D+ A+ +YP + + L+ LNL + +S +L+ + S C NL +
Sbjct: 269 -LSGF--W--DVNPAYLPAVYP-VCSGLTSLNLRYAN-----IQSADLIKLVSQCSNLQR 317
Query: 225 LLATCVFDHRFLGFVGDETLLSIASNCPRLSLLHL--ADSTALSSNSSRADPN--NNDEG 280
L L ++ D L ++A+ C L+ L + +D A N S + + EG
Sbjct: 318 LWV--------LDYIEDVGLEALAACCKDLTELRVFPSDPFAAEPNVSLTERGLVSVSEG 369
Query: 281 YASEDA------RISPTALGDFFESLPLLEELVLDVGNNVRDTWPALELLN----SKCPR 330
+ +++ AL ++ P + L + + L+ L+ +
Sbjct: 370 CPKLQSVLYFCRQMTNAALVTVAKNRPSMTCFRLCIIEPQAPDYQTLQPLDLGFGAIVEN 429
Query: 331 LKSLKLGQVHGICREIDSSMPAAGVALWKGLESLSIKNSADLTDSALIAISLGCSNLTKF 390
K L+ + G+ D G K +E LS+ + D +D L + GC L K
Sbjct: 430 YKDLRRLSLSGLLT--DRVFEYIGT-YGKKIEMLSVAFAGD-SDLGLHHVLSGCERLCKL 485
Query: 391 EVQGCNKITKMGMQIFARVLEKTLVDVRISSCKYLNTVCSLQALEPIRDRIQRLHVDCVW 450
E++ C+ K + A++ +T+ + +SSC C L + ++ RL+V+ +
Sbjct: 486 EIRDCSFGDKALLANAAKL--ETMRSLWMSSCSVSFGACKL-----LGQKMPRLNVEVID 538
Query: 451 E 451
E
Sbjct: 539 E 539
>TAIR|locus:2149805 [details] [associations]
symbol:AT5G01720 "AT5G01720" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS;TAS]
[GO:0009407 "toxin catabolic process" evidence=RCA] PROSITE:PS50181
EMBL:CP002688 GenomeReviews:BA000015_GR InterPro:IPR006553
SMART:SM00367 EMBL:AL161946 eggNOG:NOG300245 KO:K10268
EMBL:AY091103 EMBL:AY122938 EMBL:AK229588 EMBL:AY086589
IPI:IPI00541061 PIR:T48193 RefSeq:NP_568094.2 UniGene:At.24859
ProteinModelPortal:Q8RWU5 SMR:Q8RWU5 PRIDE:Q8RWU5
EnsemblPlants:AT5G01720.1 GeneID:831688 KEGG:ath:AT5G01720
TAIR:At5g01720 HOGENOM:HOG000244114 InParanoid:Q8RWU5 OMA:SINLSYC
PhylomeDB:Q8RWU5 ProtClustDB:CLSN2690716 Genevestigator:Q8RWU5
Uniprot:Q8RWU5
Length = 665
Score = 136 (52.9 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 73/271 (26%), Positives = 114/271 (42%)
Query: 179 PTAFELYPSIAASLSHLNLLVGHSFTEGYKSHELLSITSACPNLSQLLATCVFDHRFLGF 238
P + ++ SL ++L S T+ L S+ +L +L TC R L
Sbjct: 318 PDGLKAIGTLCNSLKEVSLSKCVSVTD----EGLSSLVMKLKDLRKLDITCC---RKLSR 370
Query: 239 VGDETLLSIASNCPRLSLLHLADSTALSSNSSR---ADPNNNDEGYASEDARISPTALGD 295
V ++ IA++CP L L + +S +L S + E D I L
Sbjct: 371 V---SITQIANSCPLLVSLKM-ESCSLVSREAFWLIGQKCRLLEELDLTDNEIDDEGLKS 426
Query: 296 FFESLPLLEELVLDVGNNVRDTWPALELLNSKCPRLKSLKLGQVHGICREIDSSMPAAGV 355
L L L L + N+ D L + C L+ L L + GI ++ S A G
Sbjct: 427 ISSCLSL-SSLKLGICLNITDK--GLSYIGMGCSNLRELDLYRSVGIT-DVGISTIAQGC 482
Query: 356 ALWKGLESLSIKNSADLTDSALIAISLGCSNLTKFEVQGCNKITKMGMQIFARVLEKTLV 415
LE+++I D+TD +L+++S CS L FE +GC IT G+ A V K L
Sbjct: 483 I---HLETINISYCQDITDKSLVSLSK-CSLLQTFESRGCPNITSQGLAAIA-VRCKRLA 537
Query: 416 DVRISSCKYLNTVCSLQALEPIRDRIQRLHV 446
V + C +N L AL +++++V
Sbjct: 538 KVDLKKCPSINDA-GLLALAHFSQNLKQINV 567
>UNIPROTKB|B9I9W7 [details] [associations]
symbol:FBL1 "F-box family protein" species:3694 "Populus
trichocarpa" [GO:0000822 "inositol hexakisphosphate binding"
evidence=ISS] [GO:0009734 "auxin mediated signaling pathway"
evidence=ISS] InterPro:IPR001810 SMART:SM00256 GO:GO:0009734
GO:GO:0048443 GO:GO:0010152 GO:GO:0010011 GO:GO:0010311
HOGENOM:HOG000239805 GO:GO:0019005 GO:GO:0000822 GO:GO:0002237
GO:GO:0016036 ProtClustDB:CLSN2689313 eggNOG:NOG267823 KO:K14485
OMA:PNMTRFR EMBL:CM000350 RefSeq:XP_002321035.1
EnsemblPlants:POPTR_0014s12930.1 GeneID:7491325
KEGG:pop:POPTR_572746 Uniprot:B9I9W7
Length = 584
Score = 97 (39.2 bits), Expect = 2.3e-05, Sum P(3) = 2.3e-05
Identities = 18/44 (40%), Positives = 30/44 (68%)
Query: 17 PDAIMSNIFSLITDTRTRNAMSLVCLKWCKLERSTRKSLALRGN 60
P+ ++ ++ S IT+ + RNA+SLVC W ++ER RK + + GN
Sbjct: 9 PEEVLQHVLSFITNDKDRNAVSLVCKSWYEIERWCRKRIFV-GN 51
Score = 76 (31.8 bits), Expect = 0.00035, Sum P(3) = 0.00035
Identities = 52/219 (23%), Positives = 92/219 (42%)
Query: 239 VGDETLLSIASNCPRLSLLHLADSTALSSNSSRADPNN--NDEGYASEDARIS-PTA--L 293
V DE+L IA + +L L+ S++ A N N G ++ + P+ L
Sbjct: 116 VSDESLKVIAKSFKNFKVLVLSSCEGFSTDGLAAVAANCRNLRGLDLRESEVDDPSGQWL 175
Query: 294 GDFFESLPLLEELVLD-VGNNVRDTWPALELLNSKCPRLKSLKLGQVHGI-CREIDSSMP 351
F +S L L + +G V ++ ALE L +CP LK+L+L H + ++ + +
Sbjct: 176 SRFPDSFTSLASLNISCLGAEV--SFSALERLVGRCPDLKTLRLN--HAVPLDKLANLLR 231
Query: 352 AAGVALWKGLESLSIKNSADLTDSALIAISLGCSNLTKFE-----VQG--------CNKI 398
A + G + S + D+ + A S GC L G C+ +
Sbjct: 232 GAPQLVELGTGAYSAELQPDVFSNLAGAFS-GCKELRSLSGFWNVFPGYLPAVYPVCSGL 290
Query: 399 TKMGMQIFARVLEKTLVDVRISSCKYLNTVCSLQALEPI 437
T + ++ +A + L+ + +S C L + L +E I
Sbjct: 291 TSLNLR-YANIQGADLIKL-VSQCPSLQRLWVLDYIEDI 327
Score = 72 (30.4 bits), Expect = 2.3e-05, Sum P(3) = 2.3e-05
Identities = 26/93 (27%), Positives = 45/93 (48%)
Query: 359 KGLESLSIKNSADLTDSALIAISLGCSNLTKFEVQGCNKITKMGMQIFARVLEKTLVDVR 418
K LE LS+ + D +D L + GC L K E++ C K + A++ +T+ +
Sbjct: 455 KKLEMLSVAFAGD-SDLGLHHVLSGCEKLCKLEIRDCPFGDKALLANAAKL--ETMRSLW 511
Query: 419 ISSCKYLNTVCSLQALEPIRDRIQRLHVDCVWE 451
+SSC C L + ++ RL+V+ + E
Sbjct: 512 MSSCSVSFRACKL-----LGQKMPRLNVEVIDE 539
Score = 56 (24.8 bits), Expect = 2.3e-05, Sum P(3) = 2.3e-05
Identities = 28/114 (24%), Positives = 46/114 (40%)
Query: 150 GYDFFALFEHCPSLSSIDLSHFYCWTEDLPTAFELYPSIAASLSHLNLLVGHSF-TEGYK 208
G D L CPSL + + + ED+ E + L+ L + + E
Sbjct: 302 GADLIKLVSQCPSLQRLWVLDYI---EDI--GLEALAACCKDLTELRVFPSDPYGAEPNV 356
Query: 209 S---HELLSITSACPNLSQLLATCVFDHRFLGFVGDETLLSIASNCPRLSLLHL 259
S L+S++ CP L +L C R + + L++IA N P ++ L
Sbjct: 357 SLTERGLVSVSEGCPKLHSVLYFC----RQMT---NAALVTIAKNRPSMTCFRL 403
Score = 48 (22.0 bits), Expect = 0.00014, Sum P(3) = 0.00014
Identities = 18/63 (28%), Positives = 29/63 (46%)
Query: 168 LSHFYCWTEDLP-----TAFELYPSIAASLSHLNLLVGHSFTEGYKSHELLSITSACPNL 222
L+ Y W E++ + E IA S + +LV S EG+ + L ++ + C NL
Sbjct: 99 LATAYPWLEEIRLKRMVVSDESLKVIAKSFKNFKVLVLSS-CEGFSTDGLAAVAANCRNL 157
Query: 223 SQL 225
L
Sbjct: 158 RGL 160
Score = 41 (19.5 bits), Expect = 0.00068, Sum P(3) = 0.00068
Identities = 31/136 (22%), Positives = 54/136 (39%)
Query: 64 LNQVPVCFQAINNLDLSCLSPWGHXXXXXXXXXXXXAKLLSHAFPSVVSLTIYARSPLT- 122
L++ P F ++ +L++SCL +L+ P + +L + PL
Sbjct: 175 LSRFPDSFTSLASLNISCLG--------AEVSFSALERLVGRC-PDLKTLRLNHAVPLDK 225
Query: 123 LHFLAPEWPKLSHVKLVRWHQRFNAPIGYDFFALFEHCPSLSSIDLSHFY-CWTEDLPTA 181
L L P+L + + + + F C L S LS F+ + LP
Sbjct: 226 LANLLRGAPQLVELGTGAYSAELQPDVFSNLAGAFSGCKELRS--LSGFWNVFPGYLPA- 282
Query: 182 FELYPSIAASLSHLNL 197
+YP + + L+ LNL
Sbjct: 283 --VYP-VCSGLTSLNL 295
Score = 40 (19.1 bits), Expect = 0.00035, Sum P(3) = 0.00035
Identities = 7/13 (53%), Positives = 12/13 (92%)
Query: 644 LLSQCRSLRKLFI 656
L+SQC SL++L++
Sbjct: 308 LVSQCPSLQRLWV 320
>UNIPROTKB|B6UHV2 [details] [associations]
symbol:B6UHV2 "Transport inhibitor response 1 protein"
species:4577 "Zea mays" [GO:0000822 "inositol hexakisphosphate
binding" evidence=ISS] [GO:0009734 "auxin mediated signaling
pathway" evidence=ISS] InterPro:IPR001810 SMART:SM00256
GO:GO:0009734 GO:GO:0000822 UniGene:Zm.94186 EMBL:EU976817
Gramene:B6UHV2 Uniprot:B6UHV2
Length = 573
Score = 88 (36.0 bits), Expect = 6.0e-05, Sum P(3) = 6.0e-05
Identities = 17/42 (40%), Positives = 25/42 (59%)
Query: 17 PDAIMSNIFSLITDTRTRNAMSLVCLKWCKLERSTRKSLALR 58
PD ++ I +T + RNA+SLVC W +ER R S+ +R
Sbjct: 5 PDEVVGYILGYVTSHQDRNAVSLVCRAWYDIERHGRHSVLVR 46
Score = 78 (32.5 bits), Expect = 6.0e-05, Sum P(3) = 6.0e-05
Identities = 45/158 (28%), Positives = 66/158 (41%)
Query: 108 PSVVSLTIYARSPL-TLHFLAPEWPKLSHVKLVRWHQRFNAPIGY-DFFALFEHCPSLSS 165
P++ SL + P L + PKL + + Q N P Y E+C SL S
Sbjct: 206 PNLKSLRLNLAVPFDVLSRILSRTPKLEDLGTGSFLQG-NDPAAYASLCRALENCTSLKS 264
Query: 166 IDLSHFYCWTEDLPTAFELYPSIAASLSHLNLL-VGHSFTEGYKSHELLSITSACPNLSQ 224
I S F W D P + I ++ NL + S+ +S +L+ I C L
Sbjct: 265 I--SGF--W--DAPGFY--VQGILSNCKIRNLTCLNLSYATLIQSTQLIGIIRHCKKLHV 316
Query: 225 LLATCVFDHRFLGFVGDETLLSIASNCPRLSLLHLADS 262
L V DH +GDE L +++ +CP L L + S
Sbjct: 317 LW---VLDH-----IGDEGLKAVSFSCPDLQELRVYPS 346
Score = 55 (24.4 bits), Expect = 6.0e-05, Sum P(3) = 6.0e-05
Identities = 12/33 (36%), Positives = 19/33 (57%)
Query: 361 LESLSIKNSADLTDSALIAISLGCSNLTKFEVQ 393
LE LS+ + D TD ++ + GC NL K ++
Sbjct: 452 LEMLSVTFAGD-TDDGMVYVLNGCRNLKKLVIK 483
Score = 44 (20.5 bits), Expect = 0.00087, Sum P(4) = 0.00087
Identities = 13/54 (24%), Positives = 28/54 (51%)
Query: 372 LTDSALIAISLGCSNLTKFEVQGCNKITKMGMQIFARVLEKTLVDVRISSCKYL 425
+T++AL+ I+ C LT F + C + + + + L++ + + SC+ L
Sbjct: 378 MTNTALMTIARYCPRLTSFRL--CIRKPRSADAVTGQPLDEGFGAI-VRSCRGL 428
Score = 37 (18.1 bits), Expect = 0.00087, Sum P(4) = 0.00087
Identities = 7/13 (53%), Positives = 11/13 (84%)
Query: 644 LLSQCRSLRKLFI 656
+L+ CR+L+KL I
Sbjct: 470 VLNGCRNLKKLVI 482
>UNIPROTKB|B4FYV0 [details] [associations]
symbol:B4FYV0 "Uncharacterized protein" species:4577 "Zea
mays" [GO:0000822 "inositol hexakisphosphate binding" evidence=ISS]
[GO:0009734 "auxin mediated signaling pathway" evidence=ISS]
InterPro:IPR001810 SMART:SM00256 GO:GO:0009734 HOGENOM:HOG000239805
GO:GO:0000822 OMA:HIGDEGL EMBL:BT042288 EMBL:EU957719
RefSeq:NP_001148131.1 UniGene:Zm.94186 GeneID:100281739
KEGG:zma:100281739 Gramene:B4FYV0 Uniprot:B4FYV0
Length = 573
Score = 88 (36.0 bits), Expect = 6.0e-05, Sum P(3) = 6.0e-05
Identities = 17/42 (40%), Positives = 25/42 (59%)
Query: 17 PDAIMSNIFSLITDTRTRNAMSLVCLKWCKLERSTRKSLALR 58
PD ++ I +T + RNA+SLVC W +ER R S+ +R
Sbjct: 5 PDEVVGYILGYVTSHQDRNAVSLVCRAWYDIERHGRHSVLVR 46
Score = 78 (32.5 bits), Expect = 6.0e-05, Sum P(3) = 6.0e-05
Identities = 45/158 (28%), Positives = 66/158 (41%)
Query: 108 PSVVSLTIYARSPL-TLHFLAPEWPKLSHVKLVRWHQRFNAPIGY-DFFALFEHCPSLSS 165
P++ SL + P L + PKL + + Q N P Y E+C SL S
Sbjct: 206 PNLKSLRLNLAVPFDVLSRILSRTPKLEDLGTGSFLQG-NDPAAYASLCRALENCTSLKS 264
Query: 166 IDLSHFYCWTEDLPTAFELYPSIAASLSHLNLL-VGHSFTEGYKSHELLSITSACPNLSQ 224
I S F W D P + I ++ NL + S+ +S +L+ I C L
Sbjct: 265 I--SGF--W--DAPGFY--VQGILSNCKIRNLTCLNLSYATLIQSTQLIGIIRHCKKLHV 316
Query: 225 LLATCVFDHRFLGFVGDETLLSIASNCPRLSLLHLADS 262
L V DH +GDE L +++ +CP L L + S
Sbjct: 317 LW---VLDH-----IGDEGLKAVSFSCPDLQELRVYPS 346
Score = 55 (24.4 bits), Expect = 6.0e-05, Sum P(3) = 6.0e-05
Identities = 12/33 (36%), Positives = 19/33 (57%)
Query: 361 LESLSIKNSADLTDSALIAISLGCSNLTKFEVQ 393
LE LS+ + D TD ++ + GC NL K ++
Sbjct: 452 LEMLSVTFAGD-TDDGMVYVLNGCRNLKKLVIK 483
>WB|WBGene00015350 [details] [associations]
symbol:C02F5.7 species:6239 "Caenorhabditis elegans"
[GO:0071688 "striated muscle myosin thick filament assembly"
evidence=IMP] InterPro:IPR001810 PROSITE:PS50181 SMART:SM00256
GO:GO:0071688 GeneTree:ENSGT00700000104023 InterPro:IPR006553
SMART:SM00367 EMBL:FO080288 eggNOG:NOG300245 KO:K10268
HOGENOM:HOG000230659 OMA:LTENVFG PIR:G88523 PIR:S44609
RefSeq:NP_741248.1 RefSeq:NP_741249.1 ProteinModelPortal:P34284
SMR:P34284 IntAct:P34284 MINT:MINT-227871 STRING:P34284
PaxDb:P34284 PRIDE:P34284 EnsemblMetazoa:C02F5.7b.1
EnsemblMetazoa:C02F5.7b.2 GeneID:3564805 KEGG:cel:CELE_C02F5.7
UCSC:C02F5.7a.1 CTD:3564805 WormBase:C02F5.7a WormBase:C02F5.7b
InParanoid:P34284 NextBio:954051 Uniprot:P34284
Length = 466
Score = 126 (49.4 bits), Expect = 0.00015, P = 0.00015
Identities = 43/134 (32%), Positives = 67/134 (50%)
Query: 303 LEELVLDVGNNVRDTWPALELLNSKCPRLKSLKLGQVHGICREI-DSSMPAAGVALWKGL 361
L+EL L NV D+ AL S+CP L+ L L + C+ + D+S G K L
Sbjct: 125 LKELSLKGCENVHDS--ALRTFTSRCPNLEHLSLYR----CKRVTDASCENLGRYCHK-L 177
Query: 362 ESLSIKNSADLTDSALIAISLGCSNLTKFEVQGCNKITKMGMQIFARVLEKTLVDVRISS 421
L+++N + +TD A+ I GC NL+ + C+ I G+QI K+L + +
Sbjct: 178 NYLNLENCSSITDRAMKYIGDGCPNLSYLNISWCDAIQDRGVQIILSNC-KSLDTLILRG 236
Query: 422 CKYL--NTVCSLQA 433
C+ L N S++A
Sbjct: 237 CEGLTENVFGSVEA 250
>UNIPROTKB|Q58DG6 [details] [associations]
symbol:FBXL20 "F-box/LRR-repeat protein 20" species:9913
"Bos taurus" [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR001810 PROSITE:PS50181 SMART:SM00256 GO:GO:0005737
SUPFAM:SSF81383 GeneTree:ENSGT00700000104023 InterPro:IPR006553
SMART:SM00367 eggNOG:NOG300245 KO:K10268 HOGENOM:HOG000230659
HOVERGEN:HBG051586 OrthoDB:EOG4KPTB9 EMBL:BT021631 EMBL:BC133345
IPI:IPI00718197 IPI:IPI00884875 RefSeq:NP_001030268.1
UniGene:Bt.20361 ProteinModelPortal:Q58DG6 SMR:Q58DG6 PRIDE:Q58DG6
Ensembl:ENSBTAT00000011020 GeneID:511007 KEGG:bta:511007 CTD:84961
OMA:CAHDRLE NextBio:20869722 Uniprot:Q58DG6
Length = 436
Score = 124 (48.7 bits), Expect = 0.00022, P = 0.00022
Identities = 54/200 (27%), Positives = 87/200 (43%)
Query: 236 LGFVGDETLLSIASNCPRLSLLHL------ADSTALSSNSSRADPNNNDEGYASEDARIS 289
LG VGD L + A NC + +L+L D+T S + + + D + +S
Sbjct: 102 LG-VGDNALRTFAQNCRNIEVLNLNGCTKTTDATCTSLSKFCSKLRHLDLASCTSITNMS 160
Query: 290 PTALGDFFESLPLLEELVLDVGNNVRDTWPALELLNSKCPRLKSLKLGQVHGICREI-DS 348
AL E PLLE+L + + V T ++ L C LK+L L G C ++ D
Sbjct: 161 LKALS---EGCPLLEQLNISWCDQV--TKDGIQALVRGCGGLKALFL---KG-CTQLEDE 211
Query: 349 SMPAAGVALWKGLESLSIKNSADLTDSALIAISLGCSNLTKFEVQGCNKITKMGMQIFAR 408
++ G A L +L+++ +TD LI I GC L GC+ IT + +
Sbjct: 212 ALKYIG-AHCPELVTLNLQTCLQITDEGLITICRGCHKLQSLCASGCSNITDAILNALGQ 270
Query: 409 VLEKTLVDVRISSCKYLNTV 428
+ + + ++ C L V
Sbjct: 271 NCPRLRI-LEVARCSQLTDV 289
>UNIPROTKB|Q96IG2 [details] [associations]
symbol:FBXL20 "F-box/LRR-repeat protein 20" species:9606
"Homo sapiens" [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR001810 PROSITE:PS50181 SMART:SM00256 GO:GO:0005737
SUPFAM:SSF81383 InterPro:IPR006553 SMART:SM00367 eggNOG:NOG300245
KO:K10268 HOGENOM:HOG000230659 HOVERGEN:HBG051586 OrthoDB:EOG4KPTB9
CTD:84961 OMA:CAHDRLE EMBL:DQ223959 EMBL:AK291844 EMBL:BC007557
IPI:IPI00174757 IPI:IPI00655936 RefSeq:NP_001171835.1
RefSeq:NP_116264.2 UniGene:Hs.462946 ProteinModelPortal:Q96IG2
SMR:Q96IG2 STRING:Q96IG2 PhosphoSite:Q96IG2 DMDM:38503141
PaxDb:Q96IG2 PRIDE:Q96IG2 DNASU:84961 Ensembl:ENST00000264658
Ensembl:ENST00000394294 Ensembl:ENST00000583610 GeneID:84961
KEGG:hsa:84961 UCSC:uc002hrt.3 UCSC:uc010cvu.3
GeneCards:GC17M037409 HGNC:HGNC:24679 MIM:609086 neXtProt:NX_Q96IG2
PharmGKB:PA134976410 InParanoid:Q96IG2 PhylomeDB:Q96IG2
GenomeRNAi:84961 NextBio:75475 Bgee:Q96IG2 CleanEx:HS_FBXL20
Genevestigator:Q96IG2 GermOnline:ENSG00000108306 Uniprot:Q96IG2
Length = 436
Score = 124 (48.7 bits), Expect = 0.00022, P = 0.00022
Identities = 54/200 (27%), Positives = 87/200 (43%)
Query: 236 LGFVGDETLLSIASNCPRLSLLHL------ADSTALSSNSSRADPNNNDEGYASEDARIS 289
LG VGD L + A NC + +L+L D+T S + + + D + +S
Sbjct: 102 LG-VGDNALRTFAQNCRNIEVLNLNGCTKTTDATCTSLSKFCSKLRHLDLASCTSITNMS 160
Query: 290 PTALGDFFESLPLLEELVLDVGNNVRDTWPALELLNSKCPRLKSLKLGQVHGICREI-DS 348
AL E PLLE+L + + V T ++ L C LK+L L G C ++ D
Sbjct: 161 LKALS---EGCPLLEQLNISWCDQV--TKDGIQALVRGCGGLKALFL---KG-CTQLEDE 211
Query: 349 SMPAAGVALWKGLESLSIKNSADLTDSALIAISLGCSNLTKFEVQGCNKITKMGMQIFAR 408
++ G A L +L+++ +TD LI I GC L GC+ IT + +
Sbjct: 212 ALKYIG-AHCPELVTLNLQTCLQITDEGLITICRGCHKLQSLCASGCSNITDAILNALGQ 270
Query: 409 VLEKTLVDVRISSCKYLNTV 428
+ + + ++ C L V
Sbjct: 271 NCPRLRI-LEVARCSQLTDV 289
>TAIR|locus:2088464 [details] [associations]
symbol:AFB2 "AT3G26810" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0010011
"auxin binding" evidence=IGI] [GO:0002237 "response to molecule of
bacterial origin" evidence=IEP;RCA] [GO:0005774 "vacuolar membrane"
evidence=IDA] [GO:0010152 "pollen maturation" evidence=IGI]
[GO:0048443 "stamen development" evidence=IGI;RCA] [GO:0007165
"signal transduction" evidence=RCA] [GO:0010103 "stomatal complex
morphogenesis" evidence=RCA] InterPro:IPR001810 PROSITE:PS50181
SMART:SM00256 UniPathway:UPA00143 GO:GO:0005634 GO:GO:0005774
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0006952 GO:GO:0009734
GO:GO:0048443 GO:GO:0010152 GO:GO:0016567 GO:GO:0010011
EMBL:AB016889 EMBL:AY062568 EMBL:BT010396 IPI:IPI00520683
RefSeq:NP_566800.1 UniGene:At.6031 ProteinModelPortal:Q9LW29
SMR:Q9LW29 DIP:DIP-34608N IntAct:Q9LW29 STRING:Q9LW29 PaxDb:Q9LW29
PRIDE:Q9LW29 EnsemblPlants:AT3G26810.1 GeneID:822296
KEGG:ath:AT3G26810 TAIR:At3g26810 eggNOG:NOG259467
HOGENOM:HOG000239805 InParanoid:Q9LW29 OMA:WLSCFPD PhylomeDB:Q9LW29
ProtClustDB:CLSN2687785 Genevestigator:Q9LW29 GO:GO:0019005
GO:GO:0000822 GO:GO:0002237 Uniprot:Q9LW29
Length = 575
Score = 106 (42.4 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 19/49 (38%), Positives = 32/49 (65%)
Query: 17 PDAIMSNIFSLITDTRTRNAMSLVCLKWCKLERSTRKSLALRGNIRDLN 65
PD ++ ++F +T + RNA+SLVC W K+ER +R+ + + GN +N
Sbjct: 5 PDEVIEHVFDFVTSHKDRNAISLVCKSWYKIERYSRQKVFI-GNCYAIN 52
Score = 68 (29.0 bits), Expect = 0.00045, Sum P(3) = 0.00045
Identities = 59/252 (23%), Positives = 102/252 (40%)
Query: 205 EGYKSHELLSITSACPNLSQL--LATCVFDHR--FLGFVGDE--TLLSIASNCPRLSLLH 258
EG+ + L SI + C +L L + DHR +L D TL+++ C L
Sbjct: 136 EGFTTDGLASIAANCRHLRDLDLQENEIDDHRGQWLSCFPDTCTTLVTLNFAC----LEG 191
Query: 259 LADSTALSSNSSRADPNNNDEGYASEDARISPTALGDFFESLPLLEELVLDVGNNVRDTW 318
+ AL +R+ PN + + AL P + +L + N D+
Sbjct: 192 ETNLVALERLVARS-PNLKS---LKLNRAVPLDALARLMACAPQIVDLGVGSYENDPDSE 247
Query: 319 PALELLN--SKCPRLKSLKLGQVHGICREIDSSMPAAGVALWKGLESLSIKNSADLTDSA 376
L+L+ KC L+SL G + + + P + L SL++ +A++ S
Sbjct: 248 SYLKLMAVIKKCTSLRSLS-GFLEAAPHCLSAFHP-----ICHNLTSLNLSYAAEIHGSH 301
Query: 377 LIAISLGCSNLTKFEVQGCNKITKMGMQIFARVLEKTLVDVRISSCKYL---NTVCSLQA 433
LI + C L + + + I G+++ A K L ++R+ L NT + +
Sbjct: 302 LIKLIQHCKKLQRLWI--LDSIGDKGLEVVASTC-KELQELRVFPSDLLGGGNTAVTEEG 358
Query: 434 LEPIRDRIQRLH 445
L I +LH
Sbjct: 359 LVAISAGCPKLH 370
Score = 66 (28.3 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 69/302 (22%), Positives = 115/302 (38%)
Query: 146 NAPIGYDFFALFEHCPSLSSI-DLSHFYCWTEDLPTAFELYPSIAASLSHLNLLVGHSFT 204
N P + L +S+ LS F E P + I +L+ LNL
Sbjct: 242 NDPDSESYLKLMAVIKKCTSLRSLSGFL---EAAPHCLSAFHPICHNLTSLNLSYA---A 295
Query: 205 EGYKSHELLSITSACPNLSQLLATCVFDHRFLGFVGDETLLSIASNCPRLSLLHLADSTA 264
E + SH L+ + C L +L L +GD+ L +AS C L L + S
Sbjct: 296 EIHGSH-LIKLIQHCKKLQRLW--------ILDSIGDKGLEVVASTCKELQELRVFPSDL 346
Query: 265 LSSNSSRADPNNNDEGYASEDARISPTALGDFFESLPLLEELVLDVGNNVRDTWP-ALEL 323
L ++ +EG + A P + + ++ V N + L +
Sbjct: 347 LGGGNTAV----TEEGLVAISAGC-PKLHSILYFCQQMTNAALVTVAKNCPNFIRFRLCI 401
Query: 324 LNSKCP-RLKSLKLGQVHGI----CREID----SSMPAAGVALWKG-----LESLSIKNS 369
L P + S L + G C+ + S + V L+ G LE LSI +
Sbjct: 402 LEPNKPDHVTSQPLDEGFGAIVKACKSLRRLSLSGLLTDQVFLYIGMYANQLEMLSIAFA 461
Query: 370 ADLTDSALIAISLGCSNLTKFEVQGCNKITKMG-MQIFARVLE-KTLVDVRISSCKYLNT 427
D TD ++ + GC + K E++ + G + A V + +T+ + +SSC+ +
Sbjct: 462 GD-TDKGMLYVLNGCKKMKKLEIRD----SPFGDTALLADVSKYETMRSLWMSSCEVTLS 516
Query: 428 VC 429
C
Sbjct: 517 GC 518
Score = 37 (18.1 bits), Expect = 0.00045, Sum P(3) = 0.00045
Identities = 6/15 (40%), Positives = 11/15 (73%)
Query: 644 LLSQCRSLRKLFIHG 658
++ C+SLR+L + G
Sbjct: 422 IVKACKSLRRLSLSG 436
>TAIR|locus:2079721 [details] [associations]
symbol:AT3G07550 "AT3G07550" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
PROSITE:PS50181 EMBL:CP002686 GenomeReviews:BA000014_GR
EMBL:AC009853 EMBL:AK118929 EMBL:BT008530 IPI:IPI00516514
RefSeq:NP_566312.1 RefSeq:NP_850534.1 UniGene:At.18420
UniGene:At.28242 ProteinModelPortal:Q9SRR1 SMR:Q9SRR1 IntAct:Q9SRR1
PRIDE:Q9SRR1 EnsemblPlants:AT3G07550.1 EnsemblPlants:AT3G07550.2
GeneID:819944 KEGG:ath:AT3G07550 TAIR:At3g07550 eggNOG:NOG273409
HOGENOM:HOG000243751 InParanoid:Q9SRR1 OMA:IAKGCPL PhylomeDB:Q9SRR1
ProtClustDB:CLSN2688150 Genevestigator:Q9SRR1 Uniprot:Q9SRR1
Length = 395
Score = 90 (36.7 bits), Expect = 0.00028, Sum P(3) = 0.00028
Identities = 24/88 (27%), Positives = 42/88 (47%)
Query: 320 ALELLNSKCPRLKSLKLGQVHGICREIDSSMPAAGVALW-KGLESLSIKNSADLTDSALI 378
++E + CP L+ L +C E+ S A V W + L+ L + +L D L+
Sbjct: 286 SIEAIAKGCPLLQEWNLA----LCHEVKISGWEA-VGKWCRNLKKLHVNRCRNLCDQGLL 340
Query: 379 AISLGCSNLTKFEVQGCNKITKMGMQIF 406
A+ GC NL + G ++T +++F
Sbjct: 341 ALRCGCMNLQILYMNGNARLTPTAIEMF 368
Score = 70 (29.7 bits), Expect = 0.00028, Sum P(3) = 0.00028
Identities = 14/50 (28%), Positives = 25/50 (50%)
Query: 16 LPDAIMSNIFSLITDTRTRNAMSLVCLKWCKLERSTRKSLALRGNIRDLN 65
LPD +S IF + ++ L C +W ++ +R+SL + + LN
Sbjct: 18 LPDDCLSFIFQRLDSVADHDSFGLTCHRWLNIQNISRRSLQFQCSFSVLN 67
Score = 48 (22.0 bits), Expect = 0.00028, Sum P(3) = 0.00028
Identities = 9/21 (42%), Positives = 15/21 (71%)
Query: 239 VGDETLLSIASNCPRLSLLHL 259
+ D+ + +IAS CP LS++ L
Sbjct: 130 ISDDGISTIASFCPNLSVVSL 150
>UNIPROTKB|A5ARV5 [details] [associations]
symbol:VITISV_038840 "Putative uncharacterized protein"
species:29760 "Vitis vinifera" [GO:0000822 "inositol
hexakisphosphate binding" evidence=ISS] [GO:0009734 "auxin mediated
signaling pathway" evidence=ISS] InterPro:IPR001810 SMART:SM00256
GO:GO:0009734 SUPFAM:SSF81383 HOGENOM:HOG000239805 GO:GO:0000822
eggNOG:KOG1947 EMBL:AM433343 ProteinModelPortal:A5ARV5 SMR:A5ARV5
Uniprot:A5ARV5
Length = 581
Score = 80 (33.2 bits), Expect = 0.00029, Sum P(4) = 0.00029
Identities = 16/44 (36%), Positives = 26/44 (59%)
Query: 17 PDAIMSNIFSLITDTRTRNAMSLVCLKWCKLERSTRKSLALRGN 60
P+ ++ ++ S I RN++SLVC W +ER R+ L + GN
Sbjct: 6 PEEVLEHVLSFIDSDSDRNSVSLVCKSWHDIERWCRRRLFV-GN 48
Score = 78 (32.5 bits), Expect = 0.00029, Sum P(4) = 0.00029
Identities = 45/160 (28%), Positives = 67/160 (41%)
Query: 239 VGDETLLSIASNCPRLSLLHLADSTALSSN---SSRADPNNNDEGYASEDA--RISPTAL 293
V DE L IA +L + S++ + A+ N E SE +S L
Sbjct: 113 VSDEALELIAKKFKNFRVLVMYSCEGFSTDGLATIAANCRNLKELDLSESEVDDVSGNWL 172
Query: 294 GDFFESLPLLEEL-VLDVGNNVRDTWPALELLNSKCPRLKSLKLGQVHGICREIDSSMPA 352
F +S LE L + + + +R T ALE L +CP LK+LKL H + ++ ++
Sbjct: 173 SQFPDSYTSLESLNITSLSSEIRFT--ALERLVGRCPNLKTLKLS--HSVPLDLLPNLLQ 228
Query: 353 AG---VALWKGLESLSIKNSADLTDSALIAISLGCSNLTK 389
V L GL + + DL A S GC L +
Sbjct: 229 NAPQLVELGSGLHTKEVH--PDLYSKLAGAFS-GCKGLKR 265
Score = 58 (25.5 bits), Expect = 0.00029, Sum P(4) = 0.00029
Identities = 35/148 (23%), Positives = 61/148 (41%)
Query: 523 LWIAVGELLNPIRLAGL-ENCPILEEIQIKVVGDCRNQQKPVFMAEFGLNSL-VNYPQLS 580
LW+ + + L L E+C L E+++ D Q+ V + E GL S+ P+L
Sbjct: 315 LWVL--DYIEDTGLNALAESCKDLRELRV-FPSDPFGQEPNVSLTEQGLVSVSAGCPKLH 371
Query: 581 RMHFDCGDAIGFAL-TAPRGYADLSLWERFYLNGIENLNLKELNYWPPQDMDVHQRSLSL 639
+ + C AL T R +L+ RF L IE +Y + Q L +
Sbjct: 372 SVLYFCRRMSNVALSTIARNRPNLT---RFRLCIIERFRP---DY-------ITQEPLDV 418
Query: 640 PAAGLLSQCRSLRKLFIHGTANEHFMSF 667
++ C+ L++L + G + +
Sbjct: 419 GFGAIVEHCKDLKRLSLSGLLTDRVFEY 446
Score = 44 (20.5 bits), Expect = 0.00090, Sum P(5) = 0.00090
Identities = 12/36 (33%), Positives = 21/36 (58%)
Query: 644 LLSQCRSLRKLFIHGT--ANEHFMSFFLKIPTLRDV 677
+LS C+SLRKL I ++ ++ K+ T+R +
Sbjct: 472 VLSGCKSLRKLEIRDCPFGDKALLANAAKLETMRSL 507
Score = 44 (20.5 bits), Expect = 0.00090, Sum P(5) = 0.00090
Identities = 13/38 (34%), Positives = 21/38 (55%)
Query: 539 LENCPILEEIQIKVVGDCRNQQKPV---FMAEFGLNSL 573
L + PI IK+V C+N Q+ ++ + GLN+L
Sbjct: 292 LSDAPIQCPELIKLVSQCQNLQRLWVLDYIEDTGLNAL 329
Score = 37 (18.1 bits), Expect = 0.00029, Sum P(4) = 0.00029
Identities = 7/17 (41%), Positives = 10/17 (58%)
Query: 420 SSCKYLNTVCSLQALEP 436
S CK L +C L+ + P
Sbjct: 258 SGCKGLKRLCGLRDVVP 274
>UNIPROTKB|Q2R3K5 [details] [associations]
symbol:LOC_Os11g31620 "Transport inhibitor response 1-like
protein Os11g0515500" species:39947 "Oryza sativa Japonica Group"
[GO:0000822 "inositol hexakisphosphate binding" evidence=ISS]
[GO:0009734 "auxin mediated signaling pathway" evidence=ISS]
[GO:0010011 "auxin binding" evidence=ISS] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=ISS] InterPro:IPR001810
PROSITE:PS50181 SMART:SM00256 UniPathway:UPA00143 GO:GO:0005634
GO:GO:0009734 EMBL:DP000010 EMBL:AP008217 GO:GO:0016567
GO:GO:0010011 HOGENOM:HOG000239805 GO:GO:0019005 GO:GO:0000822
EMBL:AK072358 RefSeq:NP_001067971.2 UniGene:Os.24828
EnsemblPlants:LOC_Os11g31620.1 GeneID:4350590 KEGG:osa:4350590
Gramene:Q2R3K5 eggNOG:NOG310945 OMA:HIGDEGL Uniprot:Q2R3K5
Length = 568
Score = 95 (38.5 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 16/42 (38%), Positives = 29/42 (69%)
Query: 17 PDAIMSNIFSLITDTRTRNAMSLVCLKWCKLERSTRKSLALR 58
P+ ++ +I + R RNA+SLVC +W ++ER +R+S+ +R
Sbjct: 5 PEEVVEHILGFLASHRDRNAVSLVCREWYRVERLSRRSVLVR 46
Score = 77 (32.2 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 65/260 (25%), Positives = 102/260 (39%)
Query: 186 PSIAASLSHLNLLVGHSFTEGYKSHELLSITSACPNLSQLLATCVFDHRFLGFVGDETLL 245
P IA +L L S +S L+ C L QL V DH +GDE L
Sbjct: 272 PVIAPVCKNLTCL-NLSSAPMVRSAYLIEFICQCKKLQQLW---VLDH-----IGDEGLK 322
Query: 246 SIASNCPRLSLLHLADSTALSSNSSRADPN--------NNDEGYASEDARISPTALGDFF 297
+AS+C +L L + + A + S+ + N + R++ +AL
Sbjct: 323 IVASSCIQLQELRVFPANANARASTVTEEGLVAISAGCNKLQSVLYFCQRMTNSALITVA 382
Query: 298 ESLPLLEEL---VLDVGNNVRDTWPALE----LLNSKCPRLKSLKLGQVHGICREIDSSM 350
++ P VLD G+ T L+ + C L+ L L G+ D+
Sbjct: 383 KNCPRFTSFRLCVLDPGSADAVTGQPLDEGYGAIVQSCKGLRRLCLS---GLLT--DTVF 437
Query: 351 PAAGVALWKGLESLSIKNSADLTDSALIAISLGCSNLTKFEVQGC---NKITKMGMQIFA 407
G+ + LE LS+ + D TD + + GC NL K E++ + GM +
Sbjct: 438 LYIGMYAER-LEMLSVAFAGD-TDDGMTYVLNGCKNLKKLEIRDSPFGDSALLAGMHQYE 495
Query: 408 --RVLEKTLVDVRISSCKYL 425
R L + +V + CK L
Sbjct: 496 AMRSLWLSSCNVTLGGCKSL 515
>RGD|621722 [details] [associations]
symbol:Fbxl20 "F-box and leucine-rich repeat protein 20"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=IEA] InterPro:IPR001810 PROSITE:PS50181 SMART:SM00256
RGD:621722 GO:GO:0005737 GeneTree:ENSGT00700000104023
InterPro:IPR006553 SMART:SM00367 eggNOG:NOG300245 KO:K10268
HOGENOM:HOG000230659 HOVERGEN:HBG051586 CTD:84961 EMBL:AF182443
IPI:IPI00215006 PIR:T52349 RefSeq:NP_071608.1 UniGene:Rn.18281
ProteinModelPortal:Q9QZH7 Ensembl:ENSRNOT00000067317 GeneID:64039
KEGG:rno:64039 UCSC:RGD:621722 InParanoid:Q9QZH7 NextBio:612681
ArrayExpress:Q9QZH7 Genevestigator:Q9QZH7
GermOnline:ENSRNOG00000005081 Uniprot:Q9QZH7
Length = 276
Score = 119 (46.9 bits), Expect = 0.00033, P = 0.00033
Identities = 51/171 (29%), Positives = 76/171 (44%)
Query: 236 LGFVGDETLLSIASNCPRLSLLHL------ADSTALSSNSSRADPNNNDEGYASEDARIS 289
LG VGD L + A NC + +L L D+T S + + + D + +S
Sbjct: 102 LG-VGDNALRTFAQNCRNIEVLSLNGCTKTTDATCTSLSKFCSKLRHLDLASCTSITNMS 160
Query: 290 PTALGDFFESLPLLEELVLDVGNNVRDTWPALELLNSKCPRLKSLKLGQVHGICREI-DS 348
AL E PLLE+L + + V T ++ L C LK+L L G C ++ D
Sbjct: 161 LKALS---EGCPLLEQLNISWCDQV--TKDGIQALVRGCGGLKALFL---KG-CTQLEDE 211
Query: 349 SMPAAGVALWKGLESLSIKNSADLTDSALIAISLGCSNLTKFEVQGCNKIT 399
++ G A L +L+++ +TD LI I GC L GC+ IT
Sbjct: 212 ALKYIG-AHCPELVTLNLQTCLQITDEGLITICRGCHKLQSLCASGCSNIT 261
>TAIR|locus:2099237 [details] [associations]
symbol:TIR1 "AT3G62980" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IC;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0000151
"ubiquitin ligase complex" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IDA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=RCA;TAS] [GO:0010011 "auxin binding"
evidence=IGI;IDA] [GO:0002237 "response to molecule of bacterial
origin" evidence=IEP;RCA] [GO:0000822 "inositol hexakisphosphate
binding" evidence=IDA] [GO:0009734 "auxin mediated signaling
pathway" evidence=IMP] [GO:0010152 "pollen maturation"
evidence=IGI] [GO:0048443 "stamen development" evidence=IGI;RCA]
[GO:0016036 "cellular response to phosphate starvation"
evidence=IEP] [GO:0007165 "signal transduction" evidence=RCA]
[GO:0010103 "stomatal complex morphogenesis" evidence=RCA]
[GO:0042752 "regulation of circadian rhythm" evidence=RCA]
[GO:0009733 "response to auxin stimulus" evidence=IMP] [GO:0010311
"lateral root formation" evidence=IMP] InterPro:IPR001810
PROSITE:PS50181 SMART:SM00256 UniPathway:UPA00143 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0006952 GO:GO:0009734
GO:GO:0009873 GO:GO:0048443 GO:GO:0010152 GO:GO:0007049
GO:GO:0010011 GO:GO:0010311 HOGENOM:HOG000239805 GO:GO:0019005
GO:GO:0000822 GO:GO:0002237 GO:GO:0016036 GO:GO:0004842
EMBL:AL163816 ProtClustDB:CLSN2689313 PDB:2P1N PDB:2P1O PDB:2P1Q
PDBsum:2P1N PDBsum:2P1O PDBsum:2P1Q PDB:2P1M PDB:2P1P PDB:3C6N
PDB:3C6O PDB:3C6P PDBsum:2P1M PDBsum:2P1P PDBsum:3C6N PDBsum:3C6O
PDBsum:3C6P eggNOG:NOG267823 EMBL:AF005047 EMBL:AF005048
EMBL:BT001946 EMBL:EF598824 EMBL:EF598825 EMBL:EF598826
EMBL:EF598827 EMBL:EF598828 EMBL:EF598829 EMBL:EF598830
EMBL:EF598831 EMBL:EF598832 EMBL:EF598833 EMBL:EF598834
EMBL:EF598835 EMBL:EF598836 EMBL:EF598837 EMBL:EF598838
EMBL:EF598839 EMBL:EF598840 EMBL:EF598841 EMBL:EF598842
EMBL:EF598843 EMBL:EF598844 EMBL:EF598845 EMBL:EF598846
EMBL:EF598847 EMBL:AK220790 EMBL:EU550991 EMBL:EU550992
EMBL:EU550993 EMBL:EU550994 EMBL:EU550995 EMBL:EU550996
EMBL:EU550997 EMBL:EU550998 EMBL:EU550999 EMBL:EU551000
EMBL:EU551001 EMBL:EU551002 EMBL:EU551003 EMBL:EU551004
EMBL:EU551005 EMBL:EU551006 EMBL:EU551007 EMBL:EU551008
EMBL:EU551009 EMBL:EU551010 EMBL:EU551011 EMBL:EU551012
EMBL:EU551013 EMBL:EU551014 IPI:IPI00531280 PIR:T48087
RefSeq:NP_567135.1 UniGene:At.25594 ProteinModelPortal:Q570C0
SMR:Q570C0 DIP:DIP-31740N IntAct:Q570C0 STRING:Q570C0 PaxDb:Q570C0
PRIDE:Q570C0 EnsemblPlants:AT3G62980.1 GeneID:825473
KEGG:ath:AT3G62980 GeneFarm:4958 TAIR:At3g62980 InParanoid:Q570C0
KO:K14485 OMA:PNMTRFR PhylomeDB:Q570C0 EvolutionaryTrace:Q570C0
Genevestigator:Q570C0 GermOnline:AT3G62980 Uniprot:Q570C0
Length = 594
Score = 89 (36.4 bits), Expect = 0.00033, Sum P(3) = 0.00033
Identities = 19/65 (29%), Positives = 38/65 (58%)
Query: 17 PDAIMSNIFSLITDTRTRNAMSLVCLKWCKLERSTRKSLALRGNIRDLNQVPVC--FQAI 74
P+ ++ ++FS I + RN++SLVC W ++ER R+ + + GN ++ V F +
Sbjct: 10 PEEVLEHVFSFIQLDKDRNSVSLVCKSWYEIERWCRRKVFI-GNCYAVSPATVIRRFPKV 68
Query: 75 NNLDL 79
+++L
Sbjct: 69 RSVEL 73
Score = 77 (32.2 bits), Expect = 0.00033, Sum P(3) = 0.00033
Identities = 76/318 (23%), Positives = 128/318 (40%)
Query: 116 YARSPLTLHFLAPEWPKLSHVKLV-RWH-QRFN-APIGYDFFALFEHCPSLSSIDLSHFY 172
YA SP T+ +PK+ V+L + H FN P G+ + P + ++ S Y
Sbjct: 54 YAVSPATV---IRRFPKVRSVELKGKPHFADFNLVPDGWGGYVY----PWIEAMSSS--Y 104
Query: 173 CWTEDLP-----TAFELYPSIAASLSHLNLLVGHSFTEGYKSHELLSITSACPNLSQL-L 226
W E++ + IA S + +LV S EG+ + L +I + C NL +L L
Sbjct: 105 TWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSS-CEGFSTDGLAAIAATCRNLKELDL 163
Query: 227 ATCVFDH---RFLGFVGDETLLSIASNCPRLSLLHLADSTALSSNSSRADPNNNDEGYAS 283
D +L D T S+ S L++ LA + S+ N +
Sbjct: 164 RESDVDDVSGHWLSHFPD-TYTSLVS----LNISCLASEVSFSALERLVTRCPNLKSLKL 218
Query: 284 EDARISPTALGDFFESLPLLEELVLD-VGNNVR-DTWPALELLNSKCPRLKSLKLGQVHG 341
A + L + P LEEL VR D + L + S C L+ L G
Sbjct: 219 NRA-VPLEKLATLLQRAPQLEELGTGGYTAEVRPDVYSGLSVALSGCKELRCLS-----G 272
Query: 342 ICREIDSSMPAAGVALWKGLESLSIKNSADLTDSALIAISLGCSNLTKFEVQGCNKITKM 401
+ + +PA ++ L +L++ + A + L+ + C L + V + I
Sbjct: 273 FWDAVPAYLPAV-YSVCSRLTTLNL-SYATVQSYDLVKLLCQCPKLQRLWV--LDYIEDA 328
Query: 402 GMQIFARVLEKTLVDVRI 419
G+++ A K L ++R+
Sbjct: 329 GLEVLASTC-KDLRELRV 345
Score = 65 (27.9 bits), Expect = 0.00082, Sum P(3) = 0.00082
Identities = 25/93 (26%), Positives = 45/93 (48%)
Query: 359 KGLESLSIKNSADLTDSALIAISLGCSNLTKFEVQGCNKITKMGMQIFARVLEKTLVDVR 418
K +E LS+ + D +D + + GC +L K E++ C K + A LE T+ +
Sbjct: 456 KKMEMLSVAFAGD-SDLGMHHVLSGCDSLRKLEIRDCPFGDK-ALLANASKLE-TMRSLW 512
Query: 419 ISSCKYLNTVCSLQALEPIRDRIQRLHVDCVWE 451
+SSC C L + ++ +L+V+ + E
Sbjct: 513 MSSCSVSFGACKL-----LGQKMPKLNVEVIDE 540
Score = 56 (24.8 bits), Expect = 0.00082, Sum P(3) = 0.00082
Identities = 27/113 (23%), Positives = 42/113 (37%)
Query: 151 YDFFALFEHCPSLSSIDLSHFYCWTEDLPTAFELYPSIAASLSHLNLLVGHSFTE----G 206
YD L CP L + + + ED E+ S L L + F
Sbjct: 304 YDLVKLLCQCPKLQRLWVLDYI---ED--AGLEVLASTCKDLRELRVFPSEPFVMEPNVA 358
Query: 207 YKSHELLSITSACPNLSQLLATCVFDHRFLGFVGDETLLSIASNCPRLSLLHL 259
L+S++ CP L +L C R + + L++IA N P ++ L
Sbjct: 359 LTEQGLVSVSMGCPKLESVLYFC----RQMT---NAALITIARNRPNMTRFRL 404
Score = 48 (22.0 bits), Expect = 0.00033, Sum P(3) = 0.00033
Identities = 37/155 (23%), Positives = 64/155 (41%)
Query: 519 KYLSLWIAVGELLNPIRLAGLE----NCPILEEIQIKVVGDCRNQQKPVFMAEFGLNSL- 573
K LW+ L+ I AGLE C L E+++ + + V + E GL S+
Sbjct: 315 KLQRLWV-----LDYIEDAGLEVLASTCKDLRELRV-FPSEPFVMEPNVALTEQGLVSVS 368
Query: 574 VNYPQLSRMHFDCGDAIGFAL-TAPRGYADLSLWERFYLNGIENLNLKELNYWPPQDMDV 632
+ P+L + + C AL T R +++ RF L IE K +Y + +D+
Sbjct: 369 MGCPKLESVLYFCRQMTNAALITIARNRPNMT---RFRLCIIEP---KAPDYLTLEPLDI 422
Query: 633 HQRSLSLPAAGLLSQCRSLRKLFIHGTANEHFMSF 667
++ C+ LR+L + G + +
Sbjct: 423 G-------FGAIVEHCKDLRRLSLSGLLTDKVFEY 450
>TAIR|locus:505006471 [details] [associations]
symbol:AT4G15475 "AT4G15475" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0006486 "protein glycosylation" evidence=RCA]
InterPro:IPR001810 PROSITE:PS50181 SMART:SM00256 EMBL:CP002687
GenomeReviews:CT486007_GR EMBL:AL161541 SUPFAM:SSF81383
InterPro:IPR006553 SMART:SM00367 EMBL:Z97339 eggNOG:NOG300245
KO:K10268 EMBL:AF360328 EMBL:AF361808 EMBL:AY056338 EMBL:AY084229
IPI:IPI00544862 RefSeq:NP_567467.1 UniGene:At.26216
UniGene:At.66613 ProteinModelPortal:Q9C5D2 SMR:Q9C5D2
EnsemblPlants:AT4G15475.1 GeneID:827219 KEGG:ath:AT4G15475
TAIR:At4g15475 HOGENOM:HOG000243338 InParanoid:Q9C5D2 OMA:NGCHNIG
PhylomeDB:Q9C5D2 ProtClustDB:CLSN2689449 Genevestigator:Q9C5D2
Uniprot:Q9C5D2
Length = 610
Score = 124 (48.7 bits), Expect = 0.00037, P = 0.00037
Identities = 65/261 (24%), Positives = 107/261 (40%)
Query: 187 SIAASLSHLNLL-VGHSFTEGYKSHELLSITSACPNLSQLLATCVFDHRFLGFVGDETLL 245
S+ A SH LL V + +E L+++ C L L CV V D
Sbjct: 235 SLEAVGSHCKLLEVLYLDSEYIHDKGLIAVAQGCHRLKNLKLQCVS-------VTDVAFA 287
Query: 246 SIASNCPRLSLLHLADSTALSSNSSRADPNNNDE--GYASEDAR-ISPTALGDFFESLPL 302
++ C L L L + RA + + D +S L
Sbjct: 288 AVGELCTSLERLALYSFQHFTDKGMRAIGKGSKKLKDLTLSDCYFVSCKGLEAIAHGCKE 347
Query: 303 LEELVLDVGNNVRDTWPALELLNSKCPRLKSLKLGQVHGICREI-DSSMPAAGVALWKGL 361
LE + ++ +N+ +E + CPRLK L L ++ C+ I +S++ G K L
Sbjct: 348 LERVEINGCHNIGTR--GIEAIGKSCPRLKELAL--LY--CQRIGNSALQEIGKGC-KSL 400
Query: 362 ESLSIKNSADLTDSALIAISLGCSNLTKFEVQGCNKITKMGMQIFARVLEKTLVDVRISS 421
E L + + + + D A+ +I+ GC NL K ++ C +I G+ + K+L ++ +
Sbjct: 401 EILHLVDCSGIGDIAMCSIAKGCRNLKKLHIRRCYEIGNKGIISIGKHC-KSLTELSLRF 459
Query: 422 C-----KYLNTV---CSLQAL 434
C K L + CSLQ L
Sbjct: 460 CDKVGNKALIAIGKGCSLQQL 480
>MGI|MGI:1919444 [details] [associations]
symbol:Fbxl20 "F-box and leucine-rich repeat protein 20"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001810
PROSITE:PS50181 SMART:SM00256 MGI:MGI:1919444 GO:GO:0005737
SUPFAM:SSF81383 GeneTree:ENSGT00700000104023 InterPro:IPR006553
SMART:SM00367 EMBL:AL591209 EMBL:AL591205 eggNOG:NOG300245
KO:K10268 HOGENOM:HOG000230659 HOVERGEN:HBG051586 OrthoDB:EOG4KPTB9
CTD:84961 OMA:CAHDRLE EMBL:EF649694 EMBL:AK012109 EMBL:AK036217
EMBL:AK144786 EMBL:AK220232 IPI:IPI00605645 IPI:IPI00874641
IPI:IPI00954305 RefSeq:NP_082425.1 UniGene:Mm.218350
ProteinModelPortal:Q9CZV8 SMR:Q9CZV8 IntAct:Q9CZV8 STRING:Q9CZV8
PhosphoSite:Q9CZV8 PaxDb:Q9CZV8 PRIDE:Q9CZV8
Ensembl:ENSMUST00000103143 GeneID:72194 KEGG:mmu:72194
UCSC:uc007lfm.1 UCSC:uc009vah.1 InParanoid:Q9CZV8 NextBio:335667
Bgee:Q9CZV8 CleanEx:MM_FBXL20 Genevestigator:Q9CZV8
GermOnline:ENSMUSG00000020883 Uniprot:Q9CZV8
Length = 436
Score = 122 (48.0 bits), Expect = 0.00037, P = 0.00037
Identities = 54/200 (27%), Positives = 86/200 (43%)
Query: 236 LGFVGDETLLSIASNCPRLSLLHL------ADSTALSSNSSRADPNNNDEGYASEDARIS 289
LG VGD L + A NC + +L L D+T S + + + D + +S
Sbjct: 102 LG-VGDNALRTFAQNCRNIEVLSLNGCTKTTDATCTSLSKFCSKLRHLDLASCTSITNMS 160
Query: 290 PTALGDFFESLPLLEELVLDVGNNVRDTWPALELLNSKCPRLKSLKLGQVHGICREI-DS 348
AL E PLLE+L + + V T ++ L C LK+L L G C ++ D
Sbjct: 161 LKALS---EGCPLLEQLNISWCDQV--TKDGIQALVRGCGGLKALFL---KG-CTQLEDE 211
Query: 349 SMPAAGVALWKGLESLSIKNSADLTDSALIAISLGCSNLTKFEVQGCNKITKMGMQIFAR 408
++ G A L +L+++ +TD LI I GC L GC+ IT + +
Sbjct: 212 ALKYIG-AHCPELVTLNLQTCLQITDEGLITICRGCHKLQSLCASGCSNITDAILNALGQ 270
Query: 409 VLEKTLVDVRISSCKYLNTV 428
+ + + ++ C L V
Sbjct: 271 NCPRLRI-LEVARCSQLTDV 289
>UNIPROTKB|B8Y9B4 [details] [associations]
symbol:TIR1 "Transport inhibitor response protein"
species:37690 "Citrus trifoliata" [GO:0000822 "inositol
hexakisphosphate binding" evidence=ISS] [GO:0009734 "auxin mediated
signaling pathway" evidence=ISS] InterPro:IPR001810 SMART:SM00256
GO:GO:0009734 GO:GO:0000822 EMBL:FJ502240 Uniprot:B8Y9B4
Length = 569
Score = 106 (42.4 bits), Expect = 0.00053, Sum P(2) = 0.00053
Identities = 19/44 (43%), Positives = 30/44 (68%)
Query: 17 PDAIMSNIFSLITDTRTRNAMSLVCLKWCKLERSTRKSLALRGN 60
PD ++ ++F +T + RNA+SLVC W K+ER +R S+ + GN
Sbjct: 5 PDEVIEHVFDFVTSQKDRNAVSLVCKSWYKIERLSRHSVFI-GN 47
Score = 63 (27.2 bits), Expect = 0.00053, Sum P(2) = 0.00053
Identities = 76/338 (22%), Positives = 130/338 (38%)
Query: 108 PSVVSLTIYARSPL-TLHFLAPEWPKLSHVKLVRWHQRFNAPIGYDFFALFEHCPSLSSI 166
P++ +L + PL TL L P+L + + + ++ A C S+ S
Sbjct: 206 PNLKNLRLNRAVPLDTLQKLLMRAPQLVDLGIGSFVYDPSSEAYIKLKATLVKCKSIRS- 264
Query: 167 DLSHFYCWTEDLPTAFELYPSIAASLSHLNLLVGHSFTEGYKSHELLSITSACPNLSQLL 226
LS F E +P + +L+ LNL S+ G +EL+ + C L +L
Sbjct: 265 -LSGFL---EVVPCCLSAIHPVCQNLTSLNL----SYAPGIHGNELIKLIRFCRKLERLW 316
Query: 227 ATCVFDHRFLGFVGDETLLSIASNCPRLSLLHLADSTALSSNSSRADPNNNDEGYASEDA 286
V D +GD L +A C L L + S N++ + EG + A
Sbjct: 317 ---VLDS-----IGDRGLGVVAFTCKELQELRVFPSGV--DNAAVTE-----EGLVAISA 361
Query: 287 RISPTALGDFFESLPLLEELVLDVGNNVRDTWPALELLNSKCPRLKSLK-----LGQVHG 341
+F L+ NN T L +L+ + P +++ G +
Sbjct: 362 GCPKLHSLLYFCQQMTNAALITVAKNNSNFTRFRLCILDREKPDPVTMQPLDEGFGAIVQ 421
Query: 342 ICREID----SSMPAAGVALWKG-----LESLSIKNSADLTDSALIAISLGCSNLTKFEV 392
C+ + S + V L+ G LE LSI + + +D ++ + GC L K E+
Sbjct: 422 SCKHLRRLSLSGLLTDQVFLYIGMYAEQLEMLSIAFAGN-SDKGMLYVLNGCKKLRKLEI 480
Query: 393 QGC---NK--ITKMGMQIFARVLEKTLVDVRISSCKYL 425
+ N +T +G R L + +V + C+ L
Sbjct: 481 RDSPFGNTALLTDVGKYETMRSLWMSPCEVTLGGCQTL 518
>TAIR|locus:2010366 [details] [associations]
symbol:AFB3 "AT1G12820" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0010011
"auxin binding" evidence=IGI] [GO:0002237 "response to molecule of
bacterial origin" evidence=IEP;RCA] [GO:0010152 "pollen maturation"
evidence=IGI] [GO:0048443 "stamen development" evidence=IGI;RCA]
[GO:0048527 "lateral root development" evidence=IMP] [GO:0071249
"cellular response to nitrate" evidence=IEP] [GO:0080022 "primary
root development" evidence=IMP] [GO:0000394 "RNA splicing, via
endonucleolytic cleavage and ligation" evidence=RCA] [GO:0007165
"signal transduction" evidence=RCA] [GO:0009086 "methionine
biosynthetic process" evidence=RCA] [GO:0010103 "stomatal complex
morphogenesis" evidence=RCA] [GO:0048573 "photoperiodism,
flowering" evidence=RCA] InterPro:IPR001810 PROSITE:PS50181
SMART:SM00256 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0006952 GO:GO:0009734
GO:GO:0048527 GO:GO:0048443 GO:GO:0010152 GO:GO:0016567
GO:GO:0010011 HOGENOM:HOG000239805 ProtClustDB:CLSN2687785
GO:GO:0019005 GO:GO:0000822 GO:GO:0002237 EMBL:AC012187
EMBL:AY099541 EMBL:BT002118 EMBL:AK227280 IPI:IPI00520794
PIR:F86261 RefSeq:NP_563915.1 UniGene:At.23978 UniGene:At.71229
ProteinModelPortal:Q9LPW7 SMR:Q9LPW7 IntAct:Q9LPW7 STRING:Q9LPW7
PaxDb:Q9LPW7 PRIDE:Q9LPW7 EnsemblPlants:AT1G12820.1 GeneID:837838
KEGG:ath:AT1G12820 TAIR:At1g12820 eggNOG:NOG314738
InParanoid:Q9LPW7 OMA:MEQNEED PhylomeDB:Q9LPW7
Genevestigator:Q9LPW7 GO:GO:0071249 GO:GO:0080022 Uniprot:Q9LPW7
Length = 577
Score = 101 (40.6 bits), Expect = 0.00062, Sum P(3) = 0.00062
Identities = 18/49 (36%), Positives = 31/49 (63%)
Query: 17 PDAIMSNIFSLITDTRTRNAMSLVCLKWCKLERSTRKSLALRGNIRDLN 65
PD ++ ++F + + RN++SLVC W K+ER +RK + + GN +N
Sbjct: 5 PDEVIEHVFDFVASHKDRNSISLVCKSWHKIERFSRKEVFI-GNCYAIN 52
Score = 66 (28.3 bits), Expect = 0.00093, Sum P(2) = 0.00093
Identities = 23/77 (29%), Positives = 41/77 (53%)
Query: 321 LELLNSKCPRLKSLKL--GQVHGICREIDSSMPAAG-VALWKGLESL-SIKNSA-DLTDS 375
L ++ + C L+ L++ VHG + ++S+ G VA+ G L SI +T++
Sbjct: 326 LAVVAATCKELQELRVFPSDVHGE-EDNNASVTEVGLVAISAGCPKLHSILYFCKQMTNA 384
Query: 376 ALIAISLGCSNLTKFEV 392
ALIA++ C N +F +
Sbjct: 385 ALIAVAKNCPNFIRFRL 401
Score = 58 (25.5 bits), Expect = 0.00062, Sum P(3) = 0.00062
Identities = 20/70 (28%), Positives = 32/70 (45%)
Query: 361 LESLSIKNSADLTDSALIAISLGCSNLTKFEVQGC---NK--ITKMGMQIFARVLEKTLV 415
LE LSI + D TD ++ + GC + K E++ N + +G R L +
Sbjct: 455 LEMLSIAFAGD-TDKGMLYVLNGCKKMRKLEIRDSPFGNAALLADVGRYETMRSLWMSSC 513
Query: 416 DVRISSCKYL 425
+V + CK L
Sbjct: 514 EVTLGGCKRL 523
Score = 51 (23.0 bits), Expect = 0.00062, Sum P(3) = 0.00062
Identities = 12/41 (29%), Positives = 22/41 (53%)
Query: 212 LLSITSACPNLSQLLATCVFDHRFLGFVGDETLLSIASNCP 252
L++I++ CP L +L C + + L+++A NCP
Sbjct: 361 LVAISAGCPKLHSILYFCKQ-------MTNAALIAVAKNCP 394
>UNIPROTKB|B9N0V8 [details] [associations]
symbol:FBL4 "F-box family protein" species:3694 "Populus
trichocarpa" [GO:0000822 "inositol hexakisphosphate binding"
evidence=ISS] [GO:0009734 "auxin mediated signaling pathway"
evidence=ISS] InterPro:IPR001810 SMART:SM00256 GO:GO:0005886
GO:GO:0009734 GO:GO:0048527 GO:GO:0048443 GO:GO:0010152
GO:GO:0010011 eggNOG:NOG259467 HOGENOM:HOG000239805 OMA:WLSCFPD
ProtClustDB:CLSN2687785 GO:GO:0000822 GO:GO:0002237 GO:GO:0071249
GO:GO:0080022 EMBL:DS017279 RefSeq:XP_002328871.1 UniGene:Pth.13001
EnsemblPlants:POPTR_0017s08860.1 GeneID:7481617
KEGG:pop:POPTR_742822 Uniprot:B9N0V8
Length = 571
Score = 98 (39.6 bits), Expect = 0.00062, Sum P(3) = 0.00062
Identities = 18/44 (40%), Positives = 29/44 (65%)
Query: 17 PDAIMSNIFSLITDTRTRNAMSLVCLKWCKLERSTRKSLALRGN 60
PD ++ +IF +T R RN++S VC W K+E S+R+ + + GN
Sbjct: 5 PDEVLEHIFDFVTSQRDRNSVSQVCKPWYKIESSSRQKVFV-GN 47
Score = 63 (27.2 bits), Expect = 0.00062, Sum P(3) = 0.00062
Identities = 23/70 (32%), Positives = 31/70 (44%)
Query: 361 LESLSIKNSADLTDSALIAISLGCSNLTKFEVQGC---NKITKM--GMQIFARVLEKTLV 415
LE LSI + D TD + + GC L K E++ C N M G R L +
Sbjct: 452 LEMLSIAFAGD-TDKGMQYLLNGCKKLRKLEIRDCPFGNAALLMDVGKYETMRSLWMSSC 510
Query: 416 DVRISSCKYL 425
+V + CK L
Sbjct: 511 EVTLGGCKSL 520
Score = 49 (22.3 bits), Expect = 0.00062, Sum P(3) = 0.00062
Identities = 27/138 (19%), Positives = 47/138 (34%)
Query: 150 GYDFFALFEHCPSLSSIDLSHFYCWTEDL--PTAFELYPSIAASLSHLNLLVG--HSFTE 205
G + L HC L + W D E+ S L + + H
Sbjct: 299 GAELIKLIRHCMKLQRL-------WILDCIGDQGLEVVASTCKDLQEIRVFPSDPHVGNA 351
Query: 206 GYKSHELLSITSACPNLSQLLATCVFDHRFLGFVGDETLLSIASNCPRLSLLHLADSTAL 265
L++++S C L +L C + + L+++A NCP + L
Sbjct: 352 AVTEVGLVALSSGCRKLHSILYFCQQ-------MTNVALITVAKNCPNFTRFRLCILDPT 404
Query: 266 SSNSSRADPNNNDEGYAS 283
++ P DEG+ +
Sbjct: 405 KPDAVTNQPL--DEGFGA 420
Score = 48 (22.0 bits), Expect = 0.00078, Sum P(3) = 0.00078
Identities = 37/160 (23%), Positives = 60/160 (37%)
Query: 187 SIAASLSHLNLL-VGHSFTEGYKSHELLSITSACPNLSQLLATCVFDHRFLGFVGDETLL 245
+IA++ L L + + E ++ H L C +L L C+ + E L+
Sbjct: 145 AIASNCRFLRELDLQENDVEDHRGHWLSCFPDTCTSLVSLNFACLKGE--VNVAALERLI 202
Query: 246 SIASNCPRLSLLHLADSTALSSNSSRADPNNNDEGYASEDARISPTALGDFFESLPLLEE 305
+ + N L L H L RA P+ D G S P + + + L + +
Sbjct: 203 ARSPNLRSLRLNHAVPLDVLQKILIRA-PHLVDLGVGSYVN--DPDS--ETYNKLVMAIQ 257
Query: 306 LVLDVGN--NVRDTWP-ALELLNSKCPRLKSLKLGQVHGI 342
+ V + + P L + CP L SL L GI
Sbjct: 258 KCMSVKSLSGFLEVAPHCLSAFHLICPNLTSLNLSYAPGI 297
>UNIPROTKB|A2XSX3 [details] [associations]
symbol:OsI_15707 "Putative uncharacterized protein"
species:39946 "Oryza sativa Indica Group" [GO:0000822 "inositol
hexakisphosphate binding" evidence=ISS] [GO:0009734 "auxin mediated
signaling pathway" evidence=ISS] InterPro:IPR001810 SMART:SM00256
GO:GO:0009734 eggNOG:NOG259467 HOGENOM:HOG000239805 GO:GO:0000822
EMBL:CM000129 ProteinModelPortal:A2XSX3 SMR:A2XSX3 Gramene:A2XSX3
Uniprot:A2XSX3
Length = 575
Score = 89 (36.4 bits), Expect = 0.00066, Sum P(2) = 0.00066
Identities = 17/44 (38%), Positives = 29/44 (65%)
Query: 17 PDAIMSNIFSLITDTRTRNAMSLVCLKWCKLERSTRKSLALRGN 60
P+ ++ +IFS + R RN +SLVC W ++ER +R+ + + GN
Sbjct: 5 PEEVVEHIFSFLPAQRDRNTVSLVCKVWYEIERLSRRGVFV-GN 47
Score = 80 (33.2 bits), Expect = 0.00066, Sum P(2) = 0.00066
Identities = 82/350 (23%), Positives = 136/350 (38%)
Query: 101 KLLSHAFPSVVSLTIYARSPL-TLHFLAPEWPKLSHVKLVRWHQRFNAPIGYDFFALFEH 159
+L+S + P++ SL + + TL + P L + F + + E
Sbjct: 200 RLVSRS-PNLRSLRLNRSVSVDTLAKILLRTPNLEDLGTGNLTDDFQTESYFKLTSALEK 258
Query: 160 CPSLSSIDLSHFYCWTEDLPTAFE-LYPSIAASLSHLNLLVGHSFTEGYKSHELLSITSA 218
C L S LS F W P +YP + A L+ LNL S+ + +L + S
Sbjct: 259 CKMLRS--LSGF--WDAS-PVCLSFIYP-LCAQLTGLNL----SYAPTLDASDLTKMISR 308
Query: 219 CPNLSQLLATCVFDHRFLGFVGDETLLSIASNCPRLSLL-------HLADSTALSSNS-- 269
C L +L L + D+ L +AS+C L L ++A +A++
Sbjct: 309 CVKLQRLWV--------LDCISDKGLQVVASSCKDLQELRVFPSDFYVAGYSAVTEEGLV 360
Query: 270 --SRADPNNNDEGYASEDARISPTALGDFFESLPLLEEL---VLDVGN-NVRDTWPALEL 323
S P N Y +++ AL ++ P +L+ G +V + P E
Sbjct: 361 AVSLGCPKLNSLLYFCH--QMTNAALVTVAKNCPNFTRFRLCILEPGKPDVVTSQPLDEG 418
Query: 324 LNSKCPRLKSLKLGQVHGICREIDSSMPAAGVALWKGLESLSIKNSADLTDSALIAISLG 383
+ K L+ + G+ D G K LE LSI + D +D ++ + G
Sbjct: 419 FGAIVRECKGLQRLSISGLLT--DKVFMYIGKYA-KQLEMLSIAFAGD-SDKGMMHVMNG 474
Query: 384 CSNLTKFEVQGCNKITKMGMQIFARVLEKTLVDVRISSCKYLNTVCSLQA 433
C NL K E++ + FAR +T+ + +SSC C + A
Sbjct: 475 CKNLRKLEIRDSPFGDAALLGNFARY--ETMRSLWMSSCNVTLKGCQVLA 522
>UNIPROTKB|Q7XVM8 [details] [associations]
symbol:LOC_Os04g32460 "Transport inhibitor response 1-like
protein Os04g0395600" species:39947 "Oryza sativa Japonica Group"
[GO:0000822 "inositol hexakisphosphate binding" evidence=ISS]
[GO:0009734 "auxin mediated signaling pathway" evidence=ISS]
[GO:0010011 "auxin binding" evidence=ISS] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=ISS] InterPro:IPR001810
PROSITE:PS50181 SMART:SM00256 UniPathway:UPA00143 GO:GO:0005634
GO:GO:0009734 GO:GO:0016567 GO:GO:0010011 eggNOG:NOG259467
HOGENOM:HOG000239805 OMA:WLSCFPD ProtClustDB:CLSN2687785
GO:GO:0019005 GO:GO:0000822 EMBL:AP008210 EMBL:CM000141
EMBL:AL606621 EMBL:AK100862 RefSeq:NP_001052659.1 UniGene:Os.10149
EnsemblPlants:LOC_Os04g32460.1 EnsemblPlants:LOC_Os04g32460.2
GeneID:4335696 KEGG:osa:4335696 Gramene:Q7XVM8 Uniprot:Q7XVM8
Length = 575
Score = 89 (36.4 bits), Expect = 0.00066, Sum P(2) = 0.00066
Identities = 17/44 (38%), Positives = 29/44 (65%)
Query: 17 PDAIMSNIFSLITDTRTRNAMSLVCLKWCKLERSTRKSLALRGN 60
P+ ++ +IFS + R RN +SLVC W ++ER +R+ + + GN
Sbjct: 5 PEEVVEHIFSFLPAQRDRNTVSLVCKVWYEIERLSRRGVFV-GN 47
Score = 80 (33.2 bits), Expect = 0.00066, Sum P(2) = 0.00066
Identities = 82/350 (23%), Positives = 136/350 (38%)
Query: 101 KLLSHAFPSVVSLTIYARSPL-TLHFLAPEWPKLSHVKLVRWHQRFNAPIGYDFFALFEH 159
+L+S + P++ SL + + TL + P L + F + + E
Sbjct: 200 RLVSRS-PNLRSLRLNRSVSVDTLAKILLRTPNLEDLGTGNLTDDFQTESYFKLTSALEK 258
Query: 160 CPSLSSIDLSHFYCWTEDLPTAFE-LYPSIAASLSHLNLLVGHSFTEGYKSHELLSITSA 218
C L S LS F W P +YP + A L+ LNL S+ + +L + S
Sbjct: 259 CKMLRS--LSGF--WDAS-PVCLSFIYP-LCAQLTGLNL----SYAPTLDASDLTKMISR 308
Query: 219 CPNLSQLLATCVFDHRFLGFVGDETLLSIASNCPRLSLL-------HLADSTALSSNS-- 269
C L +L L + D+ L +AS+C L L ++A +A++
Sbjct: 309 CVKLQRLWV--------LDCISDKGLQVVASSCKDLQELRVFPSDFYVAGYSAVTEEGLV 360
Query: 270 --SRADPNNNDEGYASEDARISPTALGDFFESLPLLEEL---VLDVGN-NVRDTWPALEL 323
S P N Y +++ AL ++ P +L+ G +V + P E
Sbjct: 361 AVSLGCPKLNSLLYFCH--QMTNAALVTVAKNCPNFTRFRLCILEPGKPDVVTSQPLDEG 418
Query: 324 LNSKCPRLKSLKLGQVHGICREIDSSMPAAGVALWKGLESLSIKNSADLTDSALIAISLG 383
+ K L+ + G+ D G K LE LSI + D +D ++ + G
Sbjct: 419 FGAIVRECKGLQRLSISGLLT--DKVFMYIGKYA-KQLEMLSIAFAGD-SDKGMMHVMNG 474
Query: 384 CSNLTKFEVQGCNKITKMGMQIFARVLEKTLVDVRISSCKYLNTVCSLQA 433
C NL K E++ + FAR +T+ + +SSC C + A
Sbjct: 475 CKNLRKLEIRDSPFGDAALLGNFARY--ETMRSLWMSSCNVTLKGCQVLA 522
>UNIPROTKB|B9SFB7 [details] [associations]
symbol:RCOM_1095990 "TRANSPORT INHIBITOR RESPONSE 1
protein, putative" species:3988 "Ricinus communis" [GO:0000822
"inositol hexakisphosphate binding" evidence=ISS] [GO:0009734
"auxin mediated signaling pathway" evidence=ISS] InterPro:IPR001810
SMART:SM00256 GO:GO:0009734 GO:GO:0000822 ProtClustDB:CLSN2715764
EMBL:EQ973944 RefSeq:XP_002524686.1 GeneID:8275363
KEGG:rcu:RCOM_1095990 Uniprot:B9SFB7
Length = 589
Score = 75 (31.5 bits), Expect = 0.00077, Sum P(3) = 0.00077
Identities = 14/44 (31%), Positives = 25/44 (56%)
Query: 17 PDAIMSNIFSLITDTRTRNAMSLVCLKWCKLERSTRKSLALRGN 60
PD ++ + L+ + R+++SLVC W ER +R + + GN
Sbjct: 25 PDEVLERVLGLLKSNKDRSSVSLVCKDWYNAERWSRTHVFI-GN 67
Score = 69 (29.3 bits), Expect = 0.00077, Sum P(3) = 0.00077
Identities = 30/106 (28%), Positives = 47/106 (44%)
Query: 359 KGLESLSIKNSADLTDSALIAISLGCSNLTKFEVQGCNKITKMGMQIFARVLEK--TLVD 416
K LE+LS+ A +D + + GC L K E++ C G LEK ++
Sbjct: 471 KNLETLSVA-FAGSSDWGMQCVLGGCPKLRKLEIRDC----PFGNAALLSGLEKYESMRS 525
Query: 417 VRISSCKYLNTVCSLQALEPIRDRIQRLHVDCVWESVEQYSQDHEI 462
+ +SSC C L A E + RL+V+ + E SQ ++
Sbjct: 526 LWMSSCNVTMNGCRLLARE-----MPRLNVEVMKEDGSDDSQADKV 566
Score = 67 (28.6 bits), Expect = 0.00077, Sum P(3) = 0.00077
Identities = 27/86 (31%), Positives = 39/86 (45%)
Query: 174 WTEDLPTAFELYPSIAASLSHLNLLVGHSFTEGYKSHELLSITSACPNLSQLLATCVFDH 233
W P LYP+ +L+ LNL S+ +S EL ++ CP L +L
Sbjct: 289 WEAMAPYLPVLYPA-CTNLTFLNL----SYA-ALQSLELANLLRHCPQLRRLWV------ 336
Query: 234 RFLGFVGDETLLSIASNCPRLSLLHL 259
L + D+ L S+ SNCP L L +
Sbjct: 337 --LDTIEDKGLESVGSNCPLLEELRV 360
>RGD|1305813 [details] [associations]
symbol:Fbxl7 "F-box and leucine-rich repeat protein 7"
species:10116 "Rattus norvegicus" [GO:0000086 "G2/M transition of
mitotic cell cycle" evidence=IEA;ISO] [GO:0005813 "centrosome"
evidence=IEA;ISO] [GO:0007067 "mitosis" evidence=IEA;ISO]
[GO:0008283 "cell proliferation" evidence=IEA;ISO] [GO:0016567
"protein ubiquitination" evidence=ISO] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA;ISO] [GO:0031146 "SCF-dependent
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA;ISO] InterPro:IPR001810 PROSITE:PS50181 SMART:SM00256
RGD:1305813 GO:GO:0005813 GO:GO:0000086 GO:GO:0007067 GO:GO:0008283
SUPFAM:SSF81383 GO:GO:0019005 GeneTree:ENSGT00700000104023
InterPro:IPR006553 SMART:SM00367 GO:GO:0031146 IPI:IPI00373157
Ensembl:ENSRNOT00000031170 Uniprot:F1M6W6
Length = 449
Score = 114 (45.2 bits), Expect = 0.00082, Sum P(2) = 0.00082
Identities = 65/265 (24%), Positives = 113/265 (42%)
Query: 154 FALFEHCPSLSSIDLSHFYCWTEDLPTAFELYPSIAASLSHLNLLVGHSFTEGYKSHELL 213
+ + + CP L +++S C+ F++ S+ +L HL++ G +
Sbjct: 163 YTIAQCCPELRRLEVSG--CYNISNEAVFDVV-SLCPNLEHLDV-------SGCSKVTCI 212
Query: 214 SIT-SACPNLSQLLATCVFDHRFLG----FV-GDETLLSIASNCPRLSLLHLADSTALSS 267
S+T A LS L + R+L FV DE L +IA++C +L+ L+L L+
Sbjct: 213 SLTREASIKLSPLHGKQI-SIRYLDMTDCFVLEDEGLHTIAAHCTQLTHLYLRRCVRLTD 271
Query: 268 NSSR--ADPNNNDEGYASEDARISPTALGDF-FESLPLLEELV--LDVGNNVRDTWPALE 322
R + + + D R + DF + LE + L + + R T +
Sbjct: 272 EGLRYLVIYCTSIKELSVSDCRF----VSDFGLREIAKLESRLRYLSIAHCGRITDVGIR 327
Query: 323 LLNSKCPRLKSLKLGQVHGICREIDSSMPAAGVALWKGLESLSIKNSADLTDSALIAISL 382
+ C +L+ L GI D + K L+SL I ++D+ L +++L
Sbjct: 328 YVAKYCSKLRYLNARGCEGIT---DHGVEYLAKNCTK-LKSLDIGKCPLVSDTGLESLAL 383
Query: 383 GCSNLTKFEVQGCNKITKMGMQIFA 407
C NL + ++ C IT G+QI A
Sbjct: 384 NCFNLKRLSLKSCESITGQGLQIVA 408
Score = 50 (22.7 bits), Expect = 0.00082, Sum P(2) = 0.00082
Identities = 18/49 (36%), Positives = 24/49 (48%)
Query: 14 DILPDAIMSNIFSLI-TDTRTRNAMSLVCLKWCKLERSTR--KSLALRG 59
D LPD M IFS + T+ R A VC +W L R +++ L G
Sbjct: 73 DRLPDHSMVQIFSFLPTNQLCRCAR--VCRRWYNLAWDPRLWRTIRLTG 119
>TAIR|locus:2125527 [details] [associations]
symbol:GRH1 "AT4G03190" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IGI;TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0045014 "negative
regulation of transcription by glucose" evidence=TAS] [GO:0010011
"auxin binding" evidence=IGI] [GO:0009733 "response to auxin
stimulus" evidence=IMP] [GO:0043224 "nuclear SCF ubiquitin ligase
complex" evidence=IPI] [GO:0048589 "developmental growth"
evidence=IGI] [GO:0002237 "response to molecule of bacterial
origin" evidence=IEP;RCA] [GO:0010152 "pollen maturation"
evidence=IGI] [GO:0048443 "stamen development" evidence=IGI;RCA]
[GO:0000271 "polysaccharide biosynthetic process" evidence=RCA]
[GO:0007165 "signal transduction" evidence=RCA] [GO:0009825
"multidimensional cell growth" evidence=RCA] [GO:0009932 "cell tip
growth" evidence=RCA] [GO:0010103 "stomatal complex morphogenesis"
evidence=RCA] [GO:0010817 "regulation of hormone levels"
evidence=RCA] [GO:0043481 "anthocyanin accumulation in tissues in
response to UV light" evidence=RCA] [GO:0048767 "root hair
elongation" evidence=RCA] [GO:0071555 "cell wall organization"
evidence=RCA] InterPro:IPR001810 PROSITE:PS50181 SMART:SM00256
UniPathway:UPA00143 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0006952 GO:GO:0009734 GO:GO:0048443 GO:GO:0010152
GO:GO:0010011 HOGENOM:HOG000239805 GO:GO:0000822 GO:GO:0002237
GO:GO:0004842 GO:GO:0045014 EMBL:AL161496 EMBL:AC005275
GO:GO:0043224 EMBL:AF291816 EMBL:AY045799 EMBL:AY150427
IPI:IPI00536129 PIR:E85040 RefSeq:NP_567255.1 UniGene:At.24291
UniGene:At.69891 ProteinModelPortal:Q9ZR12 SMR:Q9ZR12
DIP:DIP-34607N IntAct:Q9ZR12 STRING:Q9ZR12 PaxDb:Q9ZR12
PRIDE:Q9ZR12 EnsemblPlants:AT4G03190.1 GeneID:828045
KEGG:ath:AT4G03190 TAIR:At4g03190 eggNOG:NOG324137
InParanoid:Q9ZR12 OMA:RECIVED PhylomeDB:Q9ZR12
ProtClustDB:CLSN2689313 Genevestigator:Q9ZR12 Uniprot:Q9ZR12
Length = 585
Score = 89 (36.4 bits), Expect = 0.00097, Sum P(3) = 0.00097
Identities = 18/44 (40%), Positives = 26/44 (59%)
Query: 17 PDAIMSNIFSLITDTRTRNAMSLVCLKWCKLERSTRKSLALRGN 60
P ++ +I S I RN++SLVC W + ER TRK + + GN
Sbjct: 6 PPKVLEHILSFIDSNEDRNSVSLVCKSWFETERKTRKRVFV-GN 48
Score = 79 (32.9 bits), Expect = 0.00097, Sum P(3) = 0.00097
Identities = 62/243 (25%), Positives = 99/243 (40%)
Query: 183 ELYPSIAASLSHLNLLVGHSFTEGYKSHELLSITSACPNLSQL-LATCVFDHRFLGFVGD 241
E IAAS +LV S EG+ + + +I + C NL L L C+ + LG GD
Sbjct: 116 ECLEKIAASFKDFKVLVLTS-CEGFSTDGIAAIAATCRNLRVLELRECIVED--LG--GD 170
Query: 242 ETLLSIASNCPRLSL-LHLADSTALSSNSSRADPNNNDEGYASEDARISPTALGDFFESL 300
S+ +SL DS S+ R + + + ++ L
Sbjct: 171 WLSYFPESSTSLVSLDFSCLDSEVKISDLERLVSRSPNLKSLKLNPAVTLDGLVSLLRCA 230
Query: 301 PLLEELVLDVGNNVRDTWP-ALELLN---SKCPRLKSLKLGQVHGICREIDSSMPAAGVA 356
P L EL G+ P A L+ S C +L+SL G+ + +PA +
Sbjct: 231 PQLTEL--GTGSFAAQLKPEAFSKLSEAFSNCKQLQSLS-----GLWDVLPEYLPAL-YS 282
Query: 357 LWKGLESLSIKNSADLTDSALIAISLGCSNLTKFEVQGCNKITKMGMQIFARVLEKTLVD 416
+ GL SL++ + A + L+ + CS L K V + I G++ A K L +
Sbjct: 283 VCPGLTSLNL-SYATVRMPDLVELLRRCSKLQKLWVM--DLIEDKGLEAVASYC-KELRE 338
Query: 417 VRI 419
+R+
Sbjct: 339 LRV 341
Score = 41 (19.5 bits), Expect = 0.00097, Sum P(3) = 0.00097
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 644 LLSQCRSLRKLFIHGT--ANEHFMSFFLKIPTLRDV 677
LLS C SL+KL I + + K+ T+R +
Sbjct: 472 LLSGCESLKKLEIRDCPFGDTALLEHAAKLETMRSL 507
Score = 41 (19.5 bits), Expect = 0.00097, Sum P(3) = 0.00097
Identities = 11/36 (30%), Positives = 19/36 (52%)
Query: 619 LKELNYWPPQDMDVHQRSLSLPAAGLLSQCRSLRKL 654
L+EL +P + D+ ++ L GL+ + RKL
Sbjct: 336 LRELRVFPSEP-DLDATNIPLTEQGLVFVSKGCRKL 370
>UNIPROTKB|Q9AUH6 [details] [associations]
symbol:TIR1 "F-box containing protein TIR1" species:47664
"Populus tremula x Populus tremuloides" [GO:0000822 "inositol
hexakisphosphate binding" evidence=ISS] [GO:0009734 "auxin mediated
signaling pathway" evidence=ISS] GO:GO:0009734 GO:GO:0000822
EMBL:AF139835 ProteinModelPortal:Q9AUH6 SMR:Q9AUH6 Uniprot:Q9AUH6
Length = 635
Score = 91 (37.1 bits), Expect = 0.0010, Sum P(3) = 0.0010
Identities = 21/58 (36%), Positives = 30/58 (51%)
Query: 7 SKVPNFHDILPDAIMSNIFS----LITDTRTRNAMSLVCLKWCKLERSTRKSLALRGN 60
S VP + PD ++ N+ +T + RNA SLVC W ++E TR L + GN
Sbjct: 56 SSVPEYLAPYPDQVLENVLENVLWFLTSRKDRNAASLVCRSWYRVEALTRSDLFI-GN 112
Score = 60 (26.2 bits), Expect = 0.0010, Sum P(3) = 0.0010
Identities = 39/141 (27%), Positives = 58/141 (41%)
Query: 123 LHFLAPEWPKLSHVKLVRWHQRFNAPIGYDFFALFEHCPSLSSIDLSHFYCWTEDLPTAF 182
L L P L ++L R+ IG + L P L+ + F +ED+ +
Sbjct: 263 LERLVARSPSLKKLRLNRY-----VSIG-QLYRLMIRAPHLTHLGTGSFSP-SEDV-SQV 314
Query: 183 ELYPSIAASLSHLNLLVGHS-FTEGYKSHELLSITSACPNLSQLLATCVFDHRFLGFVGD 241
E P A++ + LV S F E + L +I C NL+ L + F V
Sbjct: 315 EQGPDYASAFAACKSLVCLSGFREIIPDY-LPAINPVCANLTSL------NFSFAD-VSA 366
Query: 242 ETLLSIASNCPRLSLLHLADS 262
E L I SNC +L + + DS
Sbjct: 367 EQLKPIISNCHKLQIFWVLDS 387
Score = 59 (25.8 bits), Expect = 0.0010, Sum P(3) = 0.0010
Identities = 22/88 (25%), Positives = 44/88 (50%)
Query: 361 LESLSIKNSADLTDSALIAISLGCSNLTKFEVQGCNKITKMGMQIFARVLEKTLVDV--- 417
L+ L I++S D+AL++ N+ + C K+++ G Q + L + +V+V
Sbjct: 545 LQKLEIRDSP-FGDAALLSGLHHYYNMRFLWMSAC-KLSRQGCQQITQALPRLVVEVIKH 602
Query: 418 --RISSCKYLNTVCSLQALEPIRDRIQR 443
+ +Y++T+ ++LE RD R
Sbjct: 603 DDNVDMDEYVDTLYMYRSLEGPRDDAPR 630
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.322 0.135 0.420 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 714 690 0.00080 121 3 11 22 0.36 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 39
No. of states in DFA: 628 (67 KB)
Total size of DFA: 392 KB (2190 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 54.13u 0.21s 54.34t Elapsed: 00:00:03
Total cpu time: 54.14u 0.21s 54.35t Elapsed: 00:00:03
Start: Sat May 11 10:55:18 2013 End: Sat May 11 10:55:21 2013