Query Summary

Your job contains 1 sequence.

Parameters

Threshold: 0.001

Maximum number of alignments shown: 100

BLAST filter: on

Query Sequence

>044166
KPSDISKVEDAQNFHIYYGQTFKVIKNAIDGRSYLLIQNNSRMAARTKYCTARIKSFVIP
MSNYSVDTDFFPGKLLGLLSSMKGMTSESVASGCVLKLYQGGEIGLVNKSEPLQFSQYAA
HFTTDSDQPQACNFANFAPFGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLT
RVAAGKTKPFKPIVAWMEFYNGVWSFTKEAFKLKYVEDAGGENVDSSINKMTYNISNSDD
LEQLHAILCTVDVVIDGTYTLEPANYTQSTFLENIDAADKSCFAFLTNQSLWRFDKRNQN
SLALDWFDGAVSQPQLVLADLTEALFPTGNYTITYFRNIAKGEGVVNIDAKMCDRDTSIP
MEPTILPCQ

High Scoring Gene Products

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  044166
        (369 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2009724 - symbol:AT1G65900 "AT1G65900" species...  1264  8.4e-129  1


>TAIR|locus:2009724 [details] [associations]
            symbol:AT1G65900 "AT1G65900" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0009507 "chloroplast"
            evidence=ISM] EMBL:CP002684 EMBL:AY049257 EMBL:AY090277
            IPI:IPI00521728 RefSeq:NP_564864.1 UniGene:At.23275
            ProteinModelPortal:Q94A98 STRING:Q94A98 PRIDE:Q94A98
            EnsemblPlants:AT1G65900.1 GeneID:842902 KEGG:ath:AT1G65900
            TAIR:At1g65900 InParanoid:Q94A98 OMA:HAILCTV PhylomeDB:Q94A98
            ProtClustDB:CLSN2689037 Genevestigator:Q94A98 Uniprot:Q94A98
        Length = 408

 Score = 1264 (450.0 bits), Expect = 8.4e-129, P = 8.4e-129
 Identities = 242/373 (64%), Positives = 288/373 (77%)

Query:     5 ISKVEDAQNFHIYYGQTFKVIKNAIDGRSYLLIQNNSRMAARTKYCTARIKSFVIPMSNY 64
             ISKVEDA NFHIYYGQTFKVIKNAIDG+SYLLIQN SRMA RTKYCT+RIKS+VIP+ NY
Sbjct:    37 ISKVEDATNFHIYYGQTFKVIKNAIDGKSYLLIQNTSRMAVRTKYCTSRIKSYVIPLLNY 96

Query:    65 SVDTDF----FPXXXXXXXXXXXXX---TSESVASGCVLKLYQGGEIGLVNKSEPLQFSQ 117
             S+DT       P                TS+ V S C+LKL + GE+  ++K E  Q SQ
Sbjct:    97 SLDTQSSQGSVPVSFFELLGLLGSLKGITSDEVVSPCLLKLCEAGEVVKLDKGE--QLSQ 154

Query:   118 YAAHFTTDSDQPQACNFANFAPFGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYL 177
             +AAHF +D+DQPQ CNFANF P  E  PL+RAEWIKFLG F N E +ANQVY++VK +Y 
Sbjct:   155 FAAHFISDTDQPQTCNFANFFPLSEGTPLQRAEWIKFLGAFTNLETKANQVYDSVKASYT 214

Query:   178 CLTRVAAGKTKPFKPIVAWMEF-YNG-VWSFTKEAFKLKYVEDAGGENVDSSINKMTYNI 235
             CL+++AA KTK FKPIVAWM +  NG +WSFTKE+ KLK+VEDAGGEN+D SINK++YN+
Sbjct:   215 CLSQMAANKTKSFKPIVAWMGYDQNGGMWSFTKESHKLKFVEDAGGENIDKSINKVSYNV 274

Query:   236 SNSDDLEQLHAILCTVDVVIDGTYTLEPANYTQSTFLENIDAADKSCFAFLTNQSLWRFD 295
             S+ DDLE LHAILCTVD VID T + +P NYTQ+TFL NI+  D SCFAFL NQS+WR+D
Sbjct:   275 SDPDDLEALHAILCTVDAVIDETLSSDPQNYTQTTFLANINVDDNSCFAFLANQSIWRYD 334

Query:   296 KRNQNSLALDWFDGAVSQPQLVLADLTEALFPTGNYTITYFRNIAKGEGVVNIDAKMCDR 355
             KR +N   LDW+DGA+SQP LVLAD+ EALFPTGNYT +YFRNIAKGEGV+NI   MCDR
Sbjct:   335 KRVRNRTTLDWYDGAISQPNLVLADIVEALFPTGNYTTSYFRNIAKGEGVINISPDMCDR 394

Query:   356 DTSIPMEPTILPC 368
             D S+P+ P+I  C
Sbjct:   395 DASLPLVPSIPAC 407


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.319   0.134   0.403    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      369       356   0.00080  117 3  11 22  0.39    34
                                                     34  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  618 (66 KB)
  Total size of DFA:  248 KB (2133 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  26.18u 0.10s 26.28t   Elapsed:  00:00:02
  Total cpu time:  26.18u 0.10s 26.28t   Elapsed:  00:00:02
  Start:  Sat May 11 10:58:52 2013   End:  Sat May 11 10:58:54 2013

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