BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 044166
(369 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224135101|ref|XP_002327566.1| predicted protein [Populus trichocarpa]
gi|222836120|gb|EEE74541.1| predicted protein [Populus trichocarpa]
Length = 379
Score = 571 bits (1472), Expect = e-160, Method: Compositional matrix adjust.
Identities = 268/368 (72%), Positives = 309/368 (83%), Gaps = 3/368 (0%)
Query: 4 DISKVEDAQNFHIYYGQTFKVIKNAIDGRSYLLIQNNSRMAARTKYCTARIKSFVIPMSN 63
+ISK EDA NFHIYYGQTFKVIKN +DG+SYLLIQNNSRMA RTKYCT+RI+SFVIP+SN
Sbjct: 12 NISKTEDAVNFHIYYGQTFKVIKNVVDGKSYLLIQNNSRMATRTKYCTSRIESFVIPLSN 71
Query: 64 YSVDTDFFPG---KLLGLLSSMKGMTSESVASGCVLKLYQGGEIGLVNKSEPLQFSQYAA 120
YS DT FP +LLGLL SMKG+TS+S+AS C LKLY+ GEI ++N+SEP QFS++ A
Sbjct: 72 YSADTYSFPVSFLELLGLLGSMKGITSDSMASECALKLYETGEIEMMNRSEPQQFSEFGA 131
Query: 121 HFTTDSDQPQACNFANFAPFGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLT 180
HF + +DQPQACNFANF P ED PL+RAEWIKFLG+F N E RAN+VY+A+KENYLCLT
Sbjct: 132 HFISVTDQPQACNFANFVPLVEDYPLQRAEWIKFLGVFVNLETRANKVYDAIKENYLCLT 191
Query: 181 RVAAGKTKPFKPIVAWMEFYNGVWSFTKEAFKLKYVEDAGGENVDSSINKMTYNISNSDD 240
+VAA K FKPIVAWM++ +G+WSFTKE KLKYVEDAGGEN+D+SINK+TYN SN DD
Sbjct: 192 KVAASKNGSFKPIVAWMQYDSGIWSFTKETCKLKYVEDAGGENIDNSINKITYNTSNPDD 251
Query: 241 LEQLHAILCTVDVVIDGTYTLEPANYTQSTFLENIDAADKSCFAFLTNQSLWRFDKRNQN 300
E+LHAILCTVDVVID TYT +PA Y QS+FL+NI D SCFAF+ NQSLWR+DKR QN
Sbjct: 252 SEELHAILCTVDVVIDETYTPDPAGYNQSSFLQNIGVDDNSCFAFIANQSLWRYDKRVQN 311
Query: 301 SLALDWFDGAVSQPQLVLADLTEALFPTGNYTITYFRNIAKGEGVVNIDAKMCDRDTSIP 360
LDW DGAVSQPQLVLADL E LFP GNY+ TYFRNIAKGEGVV+IDA MC+RD S P
Sbjct: 312 LTTLDWNDGAVSQPQLVLADLIEVLFPDGNYSTTYFRNIAKGEGVVSIDANMCERDISTP 371
Query: 361 MEPTILPC 368
+EPTIL C
Sbjct: 372 LEPTILSC 379
>gi|225466225|ref|XP_002267603.1| PREDICTED: uncharacterized protein LOC100247879 [Vitis vinifera]
gi|297738139|emb|CBI27340.3| unnamed protein product [Vitis vinifera]
Length = 407
Score = 560 bits (1443), Expect = e-157, Method: Compositional matrix adjust.
Identities = 263/375 (70%), Positives = 316/375 (84%), Gaps = 6/375 (1%)
Query: 1 KPSDISKVEDAQNFHIYYGQTFKVIKNAIDGRSYLLIQNNSRMAARTKYCTARIKSFVIP 60
K +ISKVEDA FH+YYGQTFKVIKN +DG+SYLLIQ+NSRMAARTKYCTARIKSFVIP
Sbjct: 32 KVGNISKVEDAVYFHVYYGQTFKVIKNGVDGKSYLLIQDNSRMAARTKYCTARIKSFVIP 91
Query: 61 MSNYSVDTDFFPG---KLLGLLSSMKGMTSESVASGCVLKLYQGGEIGLVNKSEPLQFSQ 117
+SNYSVDT++FP +LLG + ++KGMTSESVAS CVLK Y+ GEI +++KSEP Q
Sbjct: 92 LSNYSVDTEYFPVSFFELLGSVGNLKGMTSESVASECVLKSYEQGEIHIISKSEPQLLHQ 151
Query: 118 YAAHFTTDSDQPQACNFANFAPFGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYL 177
++AHF +++DQPQACNFA+F P ED PL+RAEWIK+LG+F+N E RAN VY+AVKENY+
Sbjct: 152 FSAHFISNTDQPQACNFASFLPSEEDTPLQRAEWIKYLGVFSNLEVRANAVYDAVKENYM 211
Query: 178 CLTRVAAGKTKP--FKPIVAWMEFYNGVWSFTKEAFKLKYVEDAGGENVDSSINKMTYNI 235
CLT+VAA K+ FKPIVAWM + +GVWSFTK+ +KLKYVEDAGGENVD+SINK+TYNI
Sbjct: 212 CLTKVAANKSAAASFKPIVAWMNYNDGVWSFTKDTYKLKYVEDAGGENVDASINKITYNI 271
Query: 236 SNSDDLEQLHAILC-TVDVVIDGTYTLEPANYTQSTFLENIDAADKSCFAFLTNQSLWRF 294
SN DDL++LHAILC TVDVVID +YT +P Y STFL+ I+ + SCF FLTN+SLWR+
Sbjct: 272 SNPDDLDELHAILCSTVDVVIDESYTSDPVGYNVSTFLQTINVEEYSCFTFLTNKSLWRY 331
Query: 295 DKRNQNSLALDWFDGAVSQPQLVLADLTEALFPTGNYTITYFRNIAKGEGVVNIDAKMCD 354
DKR QNS +DWFDGA+SQPQLVLADL EALFPTG+YT TY RN+AK EGV+NI ++MCD
Sbjct: 332 DKRIQNSTTIDWFDGAISQPQLVLADLVEALFPTGSYTTTYLRNLAKEEGVINIKSEMCD 391
Query: 355 RDTSIPMEPTILPCQ 369
RD+S MEPTIL CQ
Sbjct: 392 RDSSTAMEPTILACQ 406
>gi|357460721|ref|XP_003600642.1| hypothetical protein MTR_3g064600 [Medicago truncatula]
gi|355489690|gb|AES70893.1| hypothetical protein MTR_3g064600 [Medicago truncatula]
Length = 404
Score = 519 bits (1336), Expect = e-145, Method: Compositional matrix adjust.
Identities = 248/374 (66%), Positives = 304/374 (81%), Gaps = 10/374 (2%)
Query: 1 KPSDISKVEDAQNFHIYYGQTFKVIKNAIDGRSYLLIQNNSRMAARTKYCTARIKSFVIP 60
K + SKVEDA NFHIYYGQTFKVIKNA+DG+SYLL+QNNSR+A+RTKYCT+RIKSFVIP
Sbjct: 34 KVGNFSKVEDAVNFHIYYGQTFKVIKNAVDGQSYLLLQNNSRIASRTKYCTSRIKSFVIP 93
Query: 61 MSNYSVDTDFFPG------KLLGLLSSMKGMTSESVASGCVLKLYQGGEIGLVNKSEPLQ 114
+SN+S DTD FPG + LGLL S+KG+TS++V S CVLKLY+GG+I +NKS+
Sbjct: 94 LSNFSADTDSFPGIPFSFLEHLGLLESLKGITSDTVTSPCVLKLYKGGQIEKLNKSDYQM 153
Query: 115 FSQYAAHFTTDSDQPQACNFANFAPFGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKE 174
+Q++AHF D+DQ ACNFA PF ED PL+RAEWIKF+G FAN E+RANQVY VKE
Sbjct: 154 LAQFSAHFFGDTDQQPACNFATSVPFSEDTPLQRAEWIKFIGAFANVESRANQVYTTVKE 213
Query: 175 NYLCLTRVAAGKTKPFKPIVAWMEFYNGVWSFTKEAFKLKYVEDAGGENVDSSINKMTYN 234
NYLCL +A +T FKP VAWM++ +GVWSFTKEA+ LKYVEDAGGE +D+ NK TYN
Sbjct: 214 NYLCLAEIAKSRTS-FKPTVAWMKYNSGVWSFTKEAYYLKYVEDAGGEILDA--NKNTYN 270
Query: 235 ISNSDDLEQLHAILCTVDVVIDGTYTLEPANYTQSTFLENIDAADKSCFAFLTNQSLWRF 294
IS+ DDLE+LHA+LCTV+VVID T +P NYT STF++N++ D+SCF+FLTN SLWR+
Sbjct: 271 ISDPDDLEELHALLCTVEVVIDETLAYDPVNYTMSTFIQNLNVEDRSCFSFLTNTSLWRY 330
Query: 295 DKRNQNSLALDWFDGAVSQPQLVLADLTEALFPTGNYTITYFRNIAKGEGVVNIDAKMCD 354
DKR Q+S +LDW++GAVSQPQLVLADL E FPTGNYT+TYFRN+ KGE +NI +MCD
Sbjct: 331 DKRIQSS-SLDWYNGAVSQPQLVLADLIEVFFPTGNYTMTYFRNLFKGETPINIGPEMCD 389
Query: 355 RDTSIPMEPTILPC 368
RDTS ++PTI+PC
Sbjct: 390 RDTSSTLDPTIVPC 403
>gi|356537837|ref|XP_003537431.1| PREDICTED: uncharacterized protein LOC100809133 [Glycine max]
Length = 409
Score = 519 bits (1336), Expect = e-144, Method: Compositional matrix adjust.
Identities = 245/377 (64%), Positives = 303/377 (80%), Gaps = 12/377 (3%)
Query: 1 KPSDISKVEDAQNFHIYYGQTFKVIKNAIDGRSYLLIQNNSRMAARTKYCTARIKSFVIP 60
K + SKVEDA NFHIYYGQTFKVIKN+ DG+SYLL+QNNSR+A+RTKYCT+RIKSFVIP
Sbjct: 35 KVGNFSKVEDAGNFHIYYGQTFKVIKNSADGQSYLLLQNNSRIASRTKYCTSRIKSFVIP 94
Query: 61 MSNYSVDTDFFPG---------KLLGLLSSMKGMTSESVASGCVLKLYQGGEIGLVNKSE 111
+SNYSVDT FFPG LLGL+ S+KG+TS+ VAS CVLKLYQGG++ + N S+
Sbjct: 95 LSNYSVDTTFFPGMPSIFLSPYSLLGLVESLKGITSDYVASPCVLKLYQGGQLEMFNNSD 154
Query: 112 PLQFSQYAAHFTTDSDQPQACNFANFAPFGEDGPLRRAEWIKFLGIFANAEARANQVYNA 171
+ ++++++F +D+DQ ACNFA F PF ED PL+RAEWIKF+G FAN EARANQVY A
Sbjct: 155 YQKLAEFSSYFLSDTDQQPACNFATFVPFMEDTPLQRAEWIKFMGAFANVEARANQVYTA 214
Query: 172 VKENYLCLTRVAAGKTKPFKPIVAWMEFYNGVWSFTKEAFKLKYVEDAGGENVDSSINKM 231
VK NYLCL +VA +T FKP VAWM + NG+WSFT+E ++LKYV+DAGGE + + NK
Sbjct: 215 VKVNYLCLAKVATTRTT-FKPTVAWMRYKNGLWSFTQEKYQLKYVQDAGGEILGA--NKN 271
Query: 232 TYNISNSDDLEQLHAILCTVDVVIDGTYTLEPANYTQSTFLENIDAADKSCFAFLTNQSL 291
TYN+S+ DDLE+ HAILCT +VVID T T +P NYT S F++N++ D+SCF+F++N SL
Sbjct: 272 TYNVSDPDDLEEFHAILCTAEVVIDETLTSDPVNYTMSAFIQNLNVEDRSCFSFISNTSL 331
Query: 292 WRFDKRNQNSLALDWFDGAVSQPQLVLADLTEALFPTGNYTITYFRNIAKGEGVVNIDAK 351
WR+DKR NS+ALDW++GAVSQPQL LADL E LFPTGNYT+TYFRNIAKGE +NI +
Sbjct: 332 WRYDKRVYNSVALDWYNGAVSQPQLALADLIEVLFPTGNYTMTYFRNIAKGEVPINIGPE 391
Query: 352 MCDRDTSIPMEPTILPC 368
MCDRDTS MEPTI+ C
Sbjct: 392 MCDRDTSTAMEPTIVAC 408
>gi|449469100|ref|XP_004152259.1| PREDICTED: uncharacterized protein LOC101208429 [Cucumis sativus]
Length = 400
Score = 514 bits (1324), Expect = e-143, Method: Compositional matrix adjust.
Identities = 245/371 (66%), Positives = 299/371 (80%), Gaps = 5/371 (1%)
Query: 1 KPSDISKVEDAQNFHIYYGQTFKVIKNAIDGRSYLLIQNNSRMAARTKYCTARIKSFVIP 60
K ++SKVEDA NF IYYGQ+FKVIKN+IDG+SYLLIQN S+MA RTKYCT+RIKS+VIP
Sbjct: 31 KVGNVSKVEDAVNFRIYYGQSFKVIKNSIDGKSYLLIQNTSKMAGRTKYCTSRIKSYVIP 90
Query: 61 MSNYSVDTDFFPGKLL---GLLSSMKGMTSESVASGCVLKLYQGGEIGLVNKSEPLQFSQ 117
+SNYS+DTD FP GLL S+KG+TSESV S CVLK Y+ GEI ++NK+E Q +Q
Sbjct: 91 LSNYSLDTDLFPVSFFELLGLLGSLKGITSESVTSECVLKQYEKGEIQIINKTETQQLAQ 150
Query: 118 YAAHFTTDSDQPQACNFANFAPFGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYL 177
+AAHF D DQPQ+CNFA F P ED PL++AEWIKFLG FAN E RANQ+Y A+KENY+
Sbjct: 151 FAAHFIADVDQPQSCNFATFLPSSEDTPLQKAEWIKFLGAFANVEPRANQIYTAIKENYM 210
Query: 178 CLTRVAAGKTKPFKPIVAWMEFYNGVWSFTKEAFKLKYVEDAGGENVDSSINKMTYNISN 237
CL +A + K FKPIVAWM +Y+G+WSFTK+A+KLKY+EDAGGENVD SINK+TYN+SN
Sbjct: 211 CLKNIATTR-KTFKPIVAWMGYYDGIWSFTKDAYKLKYIEDAGGENVDDSINKITYNVSN 269
Query: 238 SDDLEQLHAILCTVDVVIDGTYTLEPANYTQSTFLENIDAADKSCFAFLTNQSLWRFDKR 297
DDL+ H ILCTV+V+ID T+T +P Y STFL+ I+ D+SC +FL+ QS+WRFDKR
Sbjct: 270 PDDLDAFHGILCTVEVIIDETFTSDPTAYNLSTFLQLINIQDQSCLSFLSTQSIWRFDKR 329
Query: 298 NQNSLALDWFDGAVSQPQLVLADLTEALFPTGNYTITYFRNIAKGEGVVNIDAKMCDRDT 357
NS A DWFDGA+SQPQLVLAD+ E LFPTGN+T TYFRN+AK EGV NI ++MC+RD
Sbjct: 330 FHNSNAFDWFDGAISQPQLVLADIIEVLFPTGNFTTTYFRNLAK-EGVTNIGSEMCERDI 388
Query: 358 SIPMEPTILPC 368
S +EPTI+ C
Sbjct: 389 SSALEPTIIAC 399
>gi|449484475|ref|XP_004156893.1| PREDICTED: uncharacterized protein LOC101227035 [Cucumis sativus]
Length = 443
Score = 513 bits (1322), Expect = e-143, Method: Compositional matrix adjust.
Identities = 245/371 (66%), Positives = 299/371 (80%), Gaps = 5/371 (1%)
Query: 1 KPSDISKVEDAQNFHIYYGQTFKVIKNAIDGRSYLLIQNNSRMAARTKYCTARIKSFVIP 60
K ++SKVEDA NF IYYGQ+FKVIKN+IDG+SYLLIQN S+MA RTKYCT+RIKS+VIP
Sbjct: 74 KVGNVSKVEDAVNFRIYYGQSFKVIKNSIDGKSYLLIQNTSKMAGRTKYCTSRIKSYVIP 133
Query: 61 MSNYSVDTDFFPGKLL---GLLSSMKGMTSESVASGCVLKLYQGGEIGLVNKSEPLQFSQ 117
+SNYS+DTD FP GLL S+KG+TSESV S CVLK Y+ GEI ++NK+E Q +Q
Sbjct: 134 LSNYSLDTDLFPVSFFELLGLLGSLKGITSESVTSECVLKQYEKGEIQIINKTETQQLAQ 193
Query: 118 YAAHFTTDSDQPQACNFANFAPFGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYL 177
+AAHF D DQPQ+CNFA F P ED PL++AEWIKFLG FAN E RANQ+Y A+KENY+
Sbjct: 194 FAAHFIADVDQPQSCNFATFLPSSEDTPLQKAEWIKFLGAFANVEPRANQIYTAIKENYM 253
Query: 178 CLTRVAAGKTKPFKPIVAWMEFYNGVWSFTKEAFKLKYVEDAGGENVDSSINKMTYNISN 237
CL +A + K FKPIVAWM +Y+G+WSFTK+A+KLKY+EDAGGENVD SINK+TYN+SN
Sbjct: 254 CLKNIATTR-KTFKPIVAWMGYYDGIWSFTKDAYKLKYIEDAGGENVDDSINKITYNVSN 312
Query: 238 SDDLEQLHAILCTVDVVIDGTYTLEPANYTQSTFLENIDAADKSCFAFLTNQSLWRFDKR 297
DDL+ H ILCTV+V+ID T+T +P Y STFL+ I+ D+SC +FL+ QS+WRFDKR
Sbjct: 313 PDDLDAFHGILCTVEVIIDETFTSDPTAYNLSTFLQLINIQDQSCLSFLSTQSIWRFDKR 372
Query: 298 NQNSLALDWFDGAVSQPQLVLADLTEALFPTGNYTITYFRNIAKGEGVVNIDAKMCDRDT 357
NS A DWFDGA+SQPQLVLAD+ E LFPTGN+T TYFRN+AK EGV NI ++MC+RD
Sbjct: 373 FHNSNAFDWFDGAISQPQLVLADIIEVLFPTGNFTTTYFRNLAK-EGVTNIGSEMCERDI 431
Query: 358 SIPMEPTILPC 368
S +EPTI+ C
Sbjct: 432 SSALEPTIIAC 442
>gi|356569396|ref|XP_003552887.1| PREDICTED: uncharacterized protein LOC100816954 [Glycine max]
Length = 403
Score = 513 bits (1321), Expect = e-143, Method: Compositional matrix adjust.
Identities = 243/371 (65%), Positives = 302/371 (81%), Gaps = 6/371 (1%)
Query: 1 KPSDISKVEDAQNFHIYYGQTFKVIKNAIDGRSYLLIQNNSRMAARTKYCTARIKSFVIP 60
K + SKVEDA NFHIYYGQTFKVIKN+ DG+SYLL+QNNSR+A+RTKYCT+RIKSFVIP
Sbjct: 35 KVGNFSKVEDAGNFHIYYGQTFKVIKNSADGQSYLLLQNNSRIASRTKYCTSRIKSFVIP 94
Query: 61 MSNYSVDTDFFPG---KLLGLLSSMKGMTSESVASGCVLKLYQGGEIGLVNKSEPLQFSQ 117
+SNYSVDT +FP +LLGL+ S+KG+TS+ VAS CVLKLY+GG+I L N S+ + ++
Sbjct: 95 LSNYSVDTTYFPVSFLELLGLVESLKGITSDYVASPCVLKLYEGGQIELFNNSDYQKLAE 154
Query: 118 YAAHFTTDSDQPQACNFANFAPFGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYL 177
++++F +D+DQ ACNFA F PF ED PL+RAEWIKF+G FAN EARANQVY AVK NYL
Sbjct: 155 FSSYFLSDTDQQPACNFATFVPFIEDIPLQRAEWIKFMGAFANVEARANQVYTAVKANYL 214
Query: 178 CLTRVAAGKTKPFKPIVAWMEFYNGVWSFTKEAFKLKYVEDAGGENVDSSINKMTYNISN 237
CL ++A +T FKP VAWM + NG+WSFT+E ++LKYV+DAGGE + + NK TYN+S+
Sbjct: 215 CLAKIATSRTT-FKPTVAWMRYKNGLWSFTQEKYQLKYVQDAGGEILGA--NKNTYNVSD 271
Query: 238 SDDLEQLHAILCTVDVVIDGTYTLEPANYTQSTFLENIDAADKSCFAFLTNQSLWRFDKR 297
DDLE+ HAILCTV+VVID T T +P NYT STF++N++ D+SCF+F++N SLWR+DKR
Sbjct: 272 PDDLEEFHAILCTVEVVIDETLTSDPVNYTFSTFIQNLNVEDRSCFSFISNTSLWRYDKR 331
Query: 298 NQNSLALDWFDGAVSQPQLVLADLTEALFPTGNYTITYFRNIAKGEGVVNIDAKMCDRDT 357
NS+ALDW++GAVSQPQL LADL E LFPT NYT TYFRNIAK E +NI +MCDRDT
Sbjct: 332 VYNSVALDWYNGAVSQPQLALADLIEVLFPTENYTTTYFRNIAKAEVPINIGLEMCDRDT 391
Query: 358 SIPMEPTILPC 368
S MEPTI+ C
Sbjct: 392 STAMEPTIVAC 402
>gi|21554140|gb|AAM63220.1| unknown [Arabidopsis thaliana]
Length = 389
Score = 505 bits (1301), Expect = e-140, Method: Compositional matrix adjust.
Identities = 248/373 (66%), Positives = 297/373 (79%), Gaps = 11/373 (2%)
Query: 5 ISKVEDAQNFHIYYGQTFKVIKNAIDGRSYLLIQNNSRMAARTKYCTARIKSFVIPMSNY 64
ISKVEDA NFHIYYGQTFKVIKNAIDG+SYLLIQN SRMA RTKYCT+RIKS+VIP+ NY
Sbjct: 18 ISKVEDATNFHIYYGQTFKVIKNAIDGKSYLLIQNTSRMAVRTKYCTSRIKSYVIPLLNY 77
Query: 65 SVDTDFFPGKL-------LGLLSSMKGMTSESVASGCVLKLYQGGEIGLVNKSEPLQFSQ 117
S+DT G + LGLL S+KG+TS+ V S C+LKL + GE+ ++K E Q SQ
Sbjct: 78 SLDTQSSQGGVPVSFFELLGLLGSLKGITSDEVVSPCLLKLCEAGEVVKLDKGE--QLSQ 135
Query: 118 YAAHFTTDSDQPQACNFANFAPFGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYL 177
+AAHF +D+DQPQ CNFANF P E PL+RAEWIKFLG F N E +ANQVY++VK +Y
Sbjct: 136 FAAHFISDTDQPQTCNFANFFPLSEGTPLQRAEWIKFLGAFTNLETKANQVYDSVKASYT 195
Query: 178 CLTRVAAGKTKPFKPIVAWMEF--YNGVWSFTKEAFKLKYVEDAGGENVDSSINKMTYNI 235
CL+++AA KTK FKPIVAWM + G+WSFTKE+ KLK+VEDAGGEN+D SINK++YN+
Sbjct: 196 CLSQMAANKTKSFKPIVAWMGYDQNGGMWSFTKESHKLKFVEDAGGENIDKSINKVSYNV 255
Query: 236 SNSDDLEQLHAILCTVDVVIDGTYTLEPANYTQSTFLENIDAADKSCFAFLTNQSLWRFD 295
S+ DDLE LHAILCTVD VID T + +P NYTQ+TFL NI+ D SCFAFL NQS+WR+D
Sbjct: 256 SDPDDLEALHAILCTVDAVIDETLSSDPQNYTQTTFLANINVDDNSCFAFLANQSIWRYD 315
Query: 296 KRNQNSLALDWFDGAVSQPQLVLADLTEALFPTGNYTITYFRNIAKGEGVVNIDAKMCDR 355
KR +N LDW+DGA+SQP LVLAD+ EALFPTGNYT +YFRNIAKGEGV+NI MCDR
Sbjct: 316 KRVRNRTTLDWYDGAISQPNLVLADIVEALFPTGNYTTSYFRNIAKGEGVINISPDMCDR 375
Query: 356 DTSIPMEPTILPC 368
D S+P+ P+I C
Sbjct: 376 DASLPLVPSIPAC 388
>gi|18408387|ref|NP_564864.1| uncharacterized protein [Arabidopsis thaliana]
gi|15146232|gb|AAK83599.1| At1g65900/F12P19_7 [Arabidopsis thaliana]
gi|19699144|gb|AAL90938.1| At1g65900/F12P19_7 [Arabidopsis thaliana]
gi|332196317|gb|AEE34438.1| uncharacterized protein [Arabidopsis thaliana]
Length = 408
Score = 505 bits (1300), Expect = e-140, Method: Compositional matrix adjust.
Identities = 248/373 (66%), Positives = 297/373 (79%), Gaps = 11/373 (2%)
Query: 5 ISKVEDAQNFHIYYGQTFKVIKNAIDGRSYLLIQNNSRMAARTKYCTARIKSFVIPMSNY 64
ISKVEDA NFHIYYGQTFKVIKNAIDG+SYLLIQN SRMA RTKYCT+RIKS+VIP+ NY
Sbjct: 37 ISKVEDATNFHIYYGQTFKVIKNAIDGKSYLLIQNTSRMAVRTKYCTSRIKSYVIPLLNY 96
Query: 65 SVDTDFFPGKL-------LGLLSSMKGMTSESVASGCVLKLYQGGEIGLVNKSEPLQFSQ 117
S+DT G + LGLL S+KG+TS+ V S C+LKL + GE+ ++K E Q SQ
Sbjct: 97 SLDTQSSQGSVPVSFFELLGLLGSLKGITSDEVVSPCLLKLCEAGEVVKLDKGE--QLSQ 154
Query: 118 YAAHFTTDSDQPQACNFANFAPFGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYL 177
+AAHF +D+DQPQ CNFANF P E PL+RAEWIKFLG F N E +ANQVY++VK +Y
Sbjct: 155 FAAHFISDTDQPQTCNFANFFPLSEGTPLQRAEWIKFLGAFTNLETKANQVYDSVKASYT 214
Query: 178 CLTRVAAGKTKPFKPIVAWMEF--YNGVWSFTKEAFKLKYVEDAGGENVDSSINKMTYNI 235
CL+++AA KTK FKPIVAWM + G+WSFTKE+ KLK+VEDAGGEN+D SINK++YN+
Sbjct: 215 CLSQMAANKTKSFKPIVAWMGYDQNGGMWSFTKESHKLKFVEDAGGENIDKSINKVSYNV 274
Query: 236 SNSDDLEQLHAILCTVDVVIDGTYTLEPANYTQSTFLENIDAADKSCFAFLTNQSLWRFD 295
S+ DDLE LHAILCTVD VID T + +P NYTQ+TFL NI+ D SCFAFL NQS+WR+D
Sbjct: 275 SDPDDLEALHAILCTVDAVIDETLSSDPQNYTQTTFLANINVDDNSCFAFLANQSIWRYD 334
Query: 296 KRNQNSLALDWFDGAVSQPQLVLADLTEALFPTGNYTITYFRNIAKGEGVVNIDAKMCDR 355
KR +N LDW+DGA+SQP LVLAD+ EALFPTGNYT +YFRNIAKGEGV+NI MCDR
Sbjct: 335 KRVRNRTTLDWYDGAISQPNLVLADIVEALFPTGNYTTSYFRNIAKGEGVINISPDMCDR 394
Query: 356 DTSIPMEPTILPC 368
D S+P+ P+I C
Sbjct: 395 DASLPLVPSIPAC 407
>gi|6227015|gb|AAF06051.1|AC009513_7 F12P19.7 [Arabidopsis thaliana]
Length = 416
Score = 502 bits (1292), Expect = e-139, Method: Compositional matrix adjust.
Identities = 245/381 (64%), Positives = 295/381 (77%), Gaps = 19/381 (4%)
Query: 5 ISKVEDAQNFHIYYGQTFKVIKNAIDGRSYLLIQNNSRMAARTKYCTARIKSFVIPMSNY 64
ISKVEDA NFHIYYGQTFKVIKNAIDG+SYLLIQN SRMA RTKYCT+RIKS+VIP+ NY
Sbjct: 37 ISKVEDATNFHIYYGQTFKVIKNAIDGKSYLLIQNTSRMAVRTKYCTSRIKSYVIPLLNY 96
Query: 65 SVDT----DFFPGKLLGLL-----------SSMKGMTSESVASGCVLKLYQGGEIGLVNK 109
S+DT D + G + S+KG+TS+ V S C+LKL + GE+ ++K
Sbjct: 97 SLDTQSSQDLYVFSYAGSVPVSFFELLGLLGSLKGITSDEVVSPCLLKLCEAGEVVKLDK 156
Query: 110 SEPLQFSQYAAHFTTDSDQPQACNFANFAPFGEDGPLRRAEWIKFLGIFANAEARANQVY 169
E Q SQ+AAHF +D+DQPQ CNFANF P E PL+RAEWIKFLG F N E +ANQVY
Sbjct: 157 GE--QLSQFAAHFISDTDQPQTCNFANFFPLSEGTPLQRAEWIKFLGAFTNLETKANQVY 214
Query: 170 NAVKENYLCLTRVAAGKTKPFKPIVAWMEF--YNGVWSFTKEAFKLKYVEDAGGENVDSS 227
++VK +Y CL+++AA KTK FKPIVAWM + G+WSFTKE+ KLK+VEDAGGEN+D S
Sbjct: 215 DSVKASYTCLSQMAANKTKSFKPIVAWMGYDQNGGMWSFTKESHKLKFVEDAGGENIDKS 274
Query: 228 INKMTYNISNSDDLEQLHAILCTVDVVIDGTYTLEPANYTQSTFLENIDAADKSCFAFLT 287
INK++YN+S+ DDLE LHAILCTVD VID T + +P NYTQ+TFL NI+ D SCFAFL
Sbjct: 275 INKVSYNVSDPDDLEALHAILCTVDAVIDETLSSDPQNYTQTTFLANINVDDNSCFAFLA 334
Query: 288 NQSLWRFDKRNQNSLALDWFDGAVSQPQLVLADLTEALFPTGNYTITYFRNIAKGEGVVN 347
NQS+WR+DKR +N LDW+DGA+SQP LVLAD+ EALFPTGNYT +YFRNIAKGEGV+N
Sbjct: 335 NQSIWRYDKRVRNRTTLDWYDGAISQPNLVLADIVEALFPTGNYTTSYFRNIAKGEGVIN 394
Query: 348 IDAKMCDRDTSIPMEPTILPC 368
I MCDRD S+P+ P+I C
Sbjct: 395 ISPDMCDRDASLPLVPSIPAC 415
>gi|357120930|ref|XP_003562177.1| PREDICTED: uncharacterized protein LOC100843630 [Brachypodium
distachyon]
Length = 415
Score = 474 bits (1221), Expect = e-131, Method: Compositional matrix adjust.
Identities = 217/371 (58%), Positives = 282/371 (76%), Gaps = 3/371 (0%)
Query: 2 PSDISKVEDAQNFHIYYGQTFKVIKNAIDGRSYLLIQNNSRMAARTKYCTARIKSFVIPM 61
P+ +S+ EDA+ F IYYGQ FKV+KN+ DG SYLL+QN SRMA +TKYCT RIKSFV+P+
Sbjct: 45 PAVVSRAEDARLFRIYYGQGFKVVKNSWDGNSYLLMQNTSRMAIKTKYCTGRIKSFVVPL 104
Query: 62 SNYSVDTDFFPG---KLLGLLSSMKGMTSESVASGCVLKLYQGGEIGLVNKSEPLQFSQY 118
+NYSVDT P +LLG+L +++G+TS+ V+S CVL+ Y G + LVN+++ + SQ+
Sbjct: 105 ANYSVDTSASPVSFFELLGVLQNLQGITSDHVSSPCVLQSYANGHVQLVNRTDAQKLSQF 164
Query: 119 AAHFTTDSDQPQACNFANFAPFGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLC 178
+AHF +++D+ + CNFA + P ED PL+RAEWIK+LG F N+E RAN +Y+A+K NYLC
Sbjct: 165 SAHFVSNTDKDKGCNFAAYVPAEEDTPLQRAEWIKYLGTFTNSEERANAIYDAIKTNYLC 224
Query: 179 LTRVAAGKTKPFKPIVAWMEFYNGVWSFTKEAFKLKYVEDAGGENVDSSINKMTYNISNS 238
L++ AA FKPIVAW+E+ G+WSF KE++KL+YV DAG E VD++I +NIS+
Sbjct: 225 LSKAAADLGTRFKPIVAWIEYTQGMWSFVKESYKLQYVTDAGAEIVDATITDKRFNISDP 284
Query: 239 DDLEQLHAILCTVDVVIDGTYTLEPANYTQSTFLENIDAADKSCFAFLTNQSLWRFDKRN 298
+D++ LHAILCTVDVVID TY +PA Y STFLENI+ SCF+F+ N S+WR+DKR
Sbjct: 285 EDMDNLHAILCTVDVVIDQTYASDPAEYKLSTFLENINVDRNSCFSFVANHSIWRYDKRI 344
Query: 299 QNSLALDWFDGAVSQPQLVLADLTEALFPTGNYTITYFRNIAKGEGVVNIDAKMCDRDTS 358
+S LDWFDGA+SQPQLVLADL E FPTGNYT YFRN+AK EGV I ++C R S
Sbjct: 345 GDSKTLDWFDGAISQPQLVLADLVEVFFPTGNYTTVYFRNLAKEEGVTEIGPEICGRSIS 404
Query: 359 IPMEPTILPCQ 369
PMEPTILPCQ
Sbjct: 405 TPMEPTILPCQ 415
>gi|224035997|gb|ACN37074.1| unknown [Zea mays]
gi|414864428|tpg|DAA42985.1| TPA: hypothetical protein ZEAMMB73_964001 [Zea mays]
Length = 402
Score = 456 bits (1174), Expect = e-126, Method: Compositional matrix adjust.
Identities = 213/368 (57%), Positives = 273/368 (74%), Gaps = 3/368 (0%)
Query: 5 ISKVEDAQNFHIYYGQTFKVIKNAIDGRSYLLIQNNSRMAARTKYCTARIKSFVIPMSNY 64
+S+VEDA F IYYGQ+FKVIKN+ DG+SYLL+QN S+MA++TKYCT RIKSFVIP++++
Sbjct: 35 VSRVEDATMFRIYYGQSFKVIKNSGDGKSYLLMQNTSKMASKTKYCTGRIKSFVIPLASF 94
Query: 65 SVDTDFFPG---KLLGLLSSMKGMTSESVASGCVLKLYQGGEIGLVNKSEPLQFSQYAAH 121
SVDT P +LLG+L S+KG+TS VAS CVL+ Y G LVN+++ SQ+ AH
Sbjct: 95 SVDTTTSPVSFFELLGVLESLKGITSNQVASQCVLQSYTSGNAQLVNRTDVQTLSQFTAH 154
Query: 122 FTTDSDQPQACNFANFAPFGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTR 181
F +D+D+ + CNFA + P E PL+ AEWIK+LG F N+E RAN VY+AVK NYLCL++
Sbjct: 155 FISDTDEDRGCNFAAYVPLEEGTPLQMAEWIKYLGTFTNSENRANAVYDAVKTNYLCLSK 214
Query: 182 VAAGKTKPFKPIVAWMEFYNGVWSFTKEAFKLKYVEDAGGENVDSSINKMTYNISNSDDL 241
VAA FKP+VAW+EF G+W+F KE++ L+YV DAG E VD++I +N S+ +D+
Sbjct: 215 VAANLGTRFKPVVAWIEFTQGMWTFVKESYILQYVTDAGAEIVDATITDKRFNSSDPEDM 274
Query: 242 EQLHAILCTVDVVIDGTYTLEPANYTQSTFLENIDAADKSCFAFLTNQSLWRFDKRNQNS 301
+ HAILCTVDVVID TY LEPA Y STFLENI+ + SC++F++N+S+WRFDKR S
Sbjct: 275 DNFHAILCTVDVVIDQTYALEPAEYKLSTFLENINVSHDSCYSFVSNRSIWRFDKRIGAS 334
Query: 302 LALDWFDGAVSQPQLVLADLTEALFPTGNYTITYFRNIAKGEGVVNIDAKMCDRDTSIPM 361
LDW DGA+SQPQLVL DL E FPTGNY YFRN+AK EGV I +MC R S PM
Sbjct: 335 GTLDWSDGAISQPQLVLGDLIEIFFPTGNYITIYFRNLAKDEGVTEIGPEMCTRSISTPM 394
Query: 362 EPTILPCQ 369
+P IL C+
Sbjct: 395 DPIILSCE 402
>gi|218191979|gb|EEC74406.1| hypothetical protein OsI_09764 [Oryza sativa Indica Group]
Length = 416
Score = 449 bits (1155), Expect = e-123, Method: Compositional matrix adjust.
Identities = 210/368 (57%), Positives = 271/368 (73%), Gaps = 5/368 (1%)
Query: 5 ISKVEDAQNFHIYYGQTFKVIKNAIDGRSYLLIQNNSRMAARTKYCTARIKSFVIPMSNY 64
+SKVEDA F IYYGQ+FKV+KN +G+SYLL+QN S+MA +TKYCT RIKSFVIP++NY
Sbjct: 51 VSKVEDATRFQIYYGQSFKVVKNNWNGKSYLLMQNTSKMATKTKYCTGRIKSFVIPLANY 110
Query: 65 SVDTDFFPG---KLLGLLSSMKGMTSESVASGCVLKLYQGGEIGLVNKSEPLQFSQYAAH 121
SVDT P +LLG+L ++KG+TS+ +AS CVL+ Y G + L NK++ +Q++AH
Sbjct: 111 SVDTTASPVSFFELLGVLQNLKGITSDQIASQCVLQSYASGNVQLFNKTDAQMLTQFSAH 170
Query: 122 FTTDSDQPQACNFANFAPFGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTR 181
F + +D+ CNFA + P E PL+RAEWIK+LG F N+E RAN VY+A+K NYLCL++
Sbjct: 171 FLSTTDE--GCNFAAYVPSEEGTPLQRAEWIKYLGAFTNSEDRANTVYDAIKANYLCLSK 228
Query: 182 VAAGKTKPFKPIVAWMEFYNGVWSFTKEAFKLKYVEDAGGENVDSSINKMTYNISNSDDL 241
AA + FKPIVAW+EF G+W+F + + ++YV DAG E VD++I +N S+ +D+
Sbjct: 229 AAANLSTTFKPIVAWIEFTQGMWTFVSDGWIVQYVTDAGAEVVDATITNRRFNNSDPEDM 288
Query: 242 EQLHAILCTVDVVIDGTYTLEPANYTQSTFLENIDAADKSCFAFLTNQSLWRFDKRNQNS 301
+ HAILCTVDVVID TY +PA Y STFLE+I+ SCF+F+ N+S+WRFDKR S
Sbjct: 289 DNFHAILCTVDVVIDQTYASDPAEYKLSTFLESINVDRDSCFSFVANRSIWRFDKRIGYS 348
Query: 302 LALDWFDGAVSQPQLVLADLTEALFPTGNYTITYFRNIAKGEGVVNIDAKMCDRDTSIPM 361
LDWFDGA+SQPQLVLADL E FPTGNYT YFRN+ K EGV + +MC R S PM
Sbjct: 349 KKLDWFDGAISQPQLVLADLIEIFFPTGNYTTIYFRNLMKDEGVTEVVPEMCSRSISTPM 408
Query: 362 EPTILPCQ 369
EPTILPCQ
Sbjct: 409 EPTILPCQ 416
>gi|222624096|gb|EEE58228.1| hypothetical protein OsJ_09201 [Oryza sativa Japonica Group]
Length = 416
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 210/368 (57%), Positives = 271/368 (73%), Gaps = 5/368 (1%)
Query: 5 ISKVEDAQNFHIYYGQTFKVIKNAIDGRSYLLIQNNSRMAARTKYCTARIKSFVIPMSNY 64
+SKVEDA F IYYGQ+FKV+KN +G+SYLL+QN S+MA +TKYCT RIKSFVIP++NY
Sbjct: 51 VSKVEDATRFQIYYGQSFKVVKNNWNGKSYLLMQNTSKMATKTKYCTGRIKSFVIPLANY 110
Query: 65 SVDTDFFPG---KLLGLLSSMKGMTSESVASGCVLKLYQGGEIGLVNKSEPLQFSQYAAH 121
SVDT P +LLG+L ++KG+TS+ +AS CVL+ Y G + L NK++ +Q++AH
Sbjct: 111 SVDTTASPVSFFELLGVLQNLKGITSDQIASQCVLQSYASGNVQLFNKTDAQMLTQFSAH 170
Query: 122 FTTDSDQPQACNFANFAPFGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTR 181
F + +D+ CNFA + P E PL+RAEWIK+LG F N+E RAN VY+A+K NYLCL++
Sbjct: 171 FLSTTDE--GCNFAAYVPSEEGTPLQRAEWIKYLGAFTNSEDRANTVYDAIKANYLCLSK 228
Query: 182 VAAGKTKPFKPIVAWMEFYNGVWSFTKEAFKLKYVEDAGGENVDSSINKMTYNISNSDDL 241
AA + FKPIVAW+EF G+W+F + + ++YV DAG E VD++I +N S+ +D+
Sbjct: 229 AAANLSTRFKPIVAWIEFTQGMWTFVSDGWIVQYVTDAGAEVVDATITNKRFNNSDPEDM 288
Query: 242 EQLHAILCTVDVVIDGTYTLEPANYTQSTFLENIDAADKSCFAFLTNQSLWRFDKRNQNS 301
+ HAILCTVDVVID TY +PA Y STFLE+I+ SCF+F+ N+S+WRFDKR S
Sbjct: 289 DNFHAILCTVDVVIDQTYASDPAEYKLSTFLESINVDRDSCFSFVANRSIWRFDKRIGYS 348
Query: 302 LALDWFDGAVSQPQLVLADLTEALFPTGNYTITYFRNIAKGEGVVNIDAKMCDRDTSIPM 361
LDWFDGA+SQPQLVLADL E FPTGNYT YFRN+ K EGV + +MC R S PM
Sbjct: 349 KKLDWFDGAISQPQLVLADLIEIFFPTGNYTTIYFRNLMKDEGVTEVVPEMCSRSISTPM 408
Query: 362 EPTILPCQ 369
EPTILPCQ
Sbjct: 409 EPTILPCQ 416
>gi|255571255|ref|XP_002526577.1| conserved hypothetical protein [Ricinus communis]
gi|223534071|gb|EEF35789.1| conserved hypothetical protein [Ricinus communis]
Length = 277
Score = 436 bits (1121), Expect = e-120, Method: Compositional matrix adjust.
Identities = 204/287 (71%), Positives = 236/287 (82%), Gaps = 10/287 (3%)
Query: 82 MKGMTSESVASGCVLKLYQGGEIGLVNKSEPLQFSQYAAHFTTDSDQPQACNFANFAPFG 141
MKG+TS SVAS C LKLY+ GE + N+++P F+Q+AAHF +D+DQPQACNFANF PF
Sbjct: 1 MKGITSNSVASECALKLYETGETEMFNRADPQVFAQFAAHFVSDTDQPQACNFANFVPFE 60
Query: 142 EDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEFYN 201
ED PL+RAEWIKFLG+FAN E RANQVY+AVKENYLCL +VAA + FKPIVAWME+ N
Sbjct: 61 EDNPLQRAEWIKFLGVFANLETRANQVYDAVKENYLCLAKVAAKSRRSFKPIVAWMEYSN 120
Query: 202 GVWSFTKEAFKLKYVEDAGGENVDSSINKMTYNISNSDDLEQLHAILCTVDVVIDGTYTL 261
+YVEDAGGEN+D+SI+KMTYNIS DDLE+LHAILCTVDVVID T TL
Sbjct: 121 ----------VKQYVEDAGGENIDNSISKMTYNISIPDDLEELHAILCTVDVVIDETGTL 170
Query: 262 EPANYTQSTFLENIDAADKSCFAFLTNQSLWRFDKRNQNSLALDWFDGAVSQPQLVLADL 321
PA Y QSTFL+N++ D SCFAFL+NQSLWR+DKR QNS ALDWFDGAVSQPQLVLADL
Sbjct: 171 NPAEYNQSTFLQNVNVEDHSCFAFLSNQSLWRYDKRVQNSTALDWFDGAVSQPQLVLADL 230
Query: 322 TEALFPTGNYTITYFRNIAKGEGVVNIDAKMCDRDTSIPMEPTILPC 368
EA+FPTGNYT TY RNIAKGEG+++I A MC+RD SIP+EPTILPC
Sbjct: 231 AEAIFPTGNYTTTYLRNIAKGEGIISIGANMCERDISIPLEPTILPC 277
>gi|242042453|ref|XP_002468621.1| hypothetical protein SORBIDRAFT_01g049210 [Sorghum bicolor]
gi|241922475|gb|EER95619.1| hypothetical protein SORBIDRAFT_01g049210 [Sorghum bicolor]
Length = 308
Score = 308 bits (789), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 138/248 (55%), Positives = 187/248 (75%), Gaps = 3/248 (1%)
Query: 5 ISKVEDAQNFHIYYGQTFKVIKNAIDGRSYLLIQNNSRMAARTKYCTARIKSFVIPMSNY 64
+SKVEDA F IYYGQ+FKVIKN+ DG+SYLL+QN S+MA++T+YCT RIKSFVIP++N+
Sbjct: 48 MSKVEDATMFRIYYGQSFKVIKNSGDGKSYLLMQNTSKMASKTRYCTGRIKSFVIPLANF 107
Query: 65 SVDTDFFPG---KLLGLLSSMKGMTSESVASGCVLKLYQGGEIGLVNKSEPLQFSQYAAH 121
S+DT P +LLG++ S+KG+TS VAS CVL+ Y G LVN+++ SQ+ AH
Sbjct: 108 SIDTTTSPVSFFELLGVIESLKGITSNQVASQCVLQSYTSGNAQLVNRTDAQTLSQFTAH 167
Query: 122 FTTDSDQPQACNFANFAPFGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTR 181
F +D+D+ + CNFA + P ED PL+RAEWIK+LG F N+E RAN VY+A+K NYLCL++
Sbjct: 168 FISDTDEDRGCNFAAYVPLEEDAPLQRAEWIKYLGTFTNSEGRANTVYDAIKTNYLCLSK 227
Query: 182 VAAGKTKPFKPIVAWMEFYNGVWSFTKEAFKLKYVEDAGGENVDSSINKMTYNISNSDDL 241
AA + FKPIVAW+EF G+W+F KE++ L+YV DAG E VD++I +N S+ +D+
Sbjct: 228 AAANLSTRFKPIVAWIEFTQGMWTFVKESYTLQYVTDAGAETVDATITNKRFNSSDPEDM 287
Query: 242 EQLHAILC 249
+ HAILC
Sbjct: 288 DNFHAILC 295
>gi|27452911|gb|AAO15295.1| Putative reverse transcriptase [Oryza sativa Japonica Group]
Length = 1183
Score = 297 bits (761), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 152/339 (44%), Positives = 204/339 (60%), Gaps = 62/339 (18%)
Query: 5 ISKVEDAQNFHIYYGQTFKVIKNAIDGRSYLLIQNNSRMAARTKYCTARIKSFVIPMSNY 64
+SKVEDA F IYYGQ+FKV+KN +G+SYLL+Q
Sbjct: 903 VSKVEDATRFQIYYGQSFKVVKNNWNGKSYLLMQ-------------------------- 936
Query: 65 SVDTDFFPGKLLGLLSSMKGMTSESVASGCVLKLYQGGEIGLVNKSEPLQFSQYAAHFTT 124
LLG+L ++KG+TS+ +AS CVL+ Y G + L NK++ +Q++AHF +
Sbjct: 937 ----------LLGVLQNLKGITSDQIASQCVLQSYASGNVQLFNKTDAQMLTQFSAHFLS 986
Query: 125 DSDQPQACNFANFAPFGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAA 184
+D+ CNFA + P E PL+ +K NYLCL++ AA
Sbjct: 987 TTDE--GCNFAAYVPSEEGTPLQ------------------------IKANYLCLSKAAA 1020
Query: 185 GKTKPFKPIVAWMEFYNGVWSFTKEAFKLKYVEDAGGENVDSSINKMTYNISNSDDLEQL 244
+ FKPIVAW+EF G+W+F + + ++YV DAG E VD++I +N S+ +D++
Sbjct: 1021 NLSTRFKPIVAWIEFTQGMWTFVSDGWIVQYVTDAGAEVVDATITNKRFNNSDPEDMDNF 1080
Query: 245 HAILCTVDVVIDGTYTLEPANYTQSTFLENIDAADKSCFAFLTNQSLWRFDKRNQNSLAL 304
HAILCTVDVVID TY +PA Y STFLE+I+ SCF+F+ N+S+WRFDKR S L
Sbjct: 1081 HAILCTVDVVIDQTYASDPAEYKLSTFLESINVDRDSCFSFVANRSIWRFDKRIGYSKKL 1140
Query: 305 DWFDGAVSQPQLVLADLTEALFPTGNYTITYFRNIAKGE 343
DWFDGA+SQPQLVLADL E FPTGNYT YFRN+ K +
Sbjct: 1141 DWFDGAISQPQLVLADLIEIFFPTGNYTTIYFRNLMKNK 1179
>gi|226506180|ref|NP_001140624.1| uncharacterized protein LOC100272698 [Zea mays]
gi|194700220|gb|ACF84194.1| unknown [Zea mays]
gi|414864431|tpg|DAA42988.1| TPA: hypothetical protein ZEAMMB73_964001 [Zea mays]
Length = 250
Score = 276 bits (705), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 124/224 (55%), Positives = 166/224 (74%)
Query: 74 KLLGLLSSMKGMTSESVASGCVLKLYQGGEIGLVNKSEPLQFSQYAAHFTTDSDQPQACN 133
+LLG+L S+KG+TS VAS CVL+ Y G LVN+++ SQ+ AHF +D+D+ + CN
Sbjct: 2 QLLGVLESLKGITSNQVASQCVLQSYTSGNAQLVNRTDVQTLSQFTAHFISDTDEDRGCN 61
Query: 134 FANFAPFGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPI 193
FA + P E PL+ AEWIK+LG F N+E RAN VY+AVK NYLCL++VAA FKP+
Sbjct: 62 FAAYVPLEEGTPLQMAEWIKYLGTFTNSENRANAVYDAVKTNYLCLSKVAANLGTRFKPV 121
Query: 194 VAWMEFYNGVWSFTKEAFKLKYVEDAGGENVDSSINKMTYNISNSDDLEQLHAILCTVDV 253
VAW+EF G+W+F KE++ L+YV DAG E VD++I +N S+ +D++ HAILCTVDV
Sbjct: 122 VAWIEFTQGMWTFVKESYILQYVTDAGAEIVDATITDKRFNSSDPEDMDNFHAILCTVDV 181
Query: 254 VIDGTYTLEPANYTQSTFLENIDAADKSCFAFLTNQSLWRFDKR 297
VID TY LEPA Y STFLENI+ + SC++F++N+S+WRFDKR
Sbjct: 182 VIDQTYALEPAEYKLSTFLENINVSHDSCYSFVSNRSIWRFDKR 225
>gi|108705892|gb|ABF93687.1| expressed protein [Oryza sativa Japonica Group]
Length = 336
Score = 268 bits (686), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 136/291 (46%), Positives = 186/291 (63%), Gaps = 42/291 (14%)
Query: 5 ISKVEDAQNFHIYYGQTFKVIKNAIDGRSYLLIQNNSRMAARTKYCTARIKSFVIPMSNY 64
+SKVEDA F IYYGQ+FKV+KN +G+SYLL+QN S+MA +TKYCT RIKSFVIP++NY
Sbjct: 51 VSKVEDATRFQIYYGQSFKVVKNNWNGKSYLLMQNTSKMATKTKYCTGRIKSFVIPLANY 110
Query: 65 SVDTDFFPG---KLLGLLSSMKGMTSESVASGCVLKLYQGGEIGLVNKSEPLQFSQYAAH 121
SVDT P +LLG+L ++KG+TS+ +AS CVL+ Y G + L NK++ +Q++AH
Sbjct: 111 SVDTTASPVSFFELLGVLQNLKGITSDQIASQCVLQSYASGNVQLFNKTDAQMLTQFSAH 170
Query: 122 FTTDSDQPQACNFANFAPFGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTR 181
F + +D+ CNFA + P E PL+RAEWIK+LG F N+E RAN VY+A+K NYLCL++
Sbjct: 171 FLSTTDE--GCNFAAYVPSEEGTPLQRAEWIKYLGAFTNSEDRANTVYDAIKANYLCLSK 228
Query: 182 VAAGKTKPFKPIVAWMEFYNGVWSFTKEAFKL---------------------------- 213
AA + FKPIVAW+EF G+W+F + + +
Sbjct: 229 AAANLSTRFKPIVAWIEFTQGMWTFVSDGWIVQVMSFVYCSTLNIKLSTKQMKWRQLMRI 288
Query: 214 ------KYVEDAGGENVDSSINKMTYNISNSDDLEQLHAILCTVDVVIDGT 258
+YV DAG E VD++I +N S+ +D++ HAILC V ID T
Sbjct: 289 WYLCHKQYVTDAGAEVVDATITNKRFNNSDPEDMDNFHAILC---VSIDNT 336
>gi|219887625|gb|ACL54187.1| unknown [Zea mays]
gi|414864429|tpg|DAA42986.1| TPA: hypothetical protein ZEAMMB73_964001 [Zea mays]
Length = 219
Score = 209 bits (533), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 99/172 (57%), Positives = 130/172 (75%), Gaps = 3/172 (1%)
Query: 5 ISKVEDAQNFHIYYGQTFKVIKNAIDGRSYLLIQNNSRMAARTKYCTARIKSFVIPMSNY 64
+S+VEDA F IYYGQ+FKVIKN+ DG+SYLL+QN S+MA++TKYCT RIKSFVIP++++
Sbjct: 35 VSRVEDATMFRIYYGQSFKVIKNSGDGKSYLLMQNTSKMASKTKYCTGRIKSFVIPLASF 94
Query: 65 SVDTDFFPG---KLLGLLSSMKGMTSESVASGCVLKLYQGGEIGLVNKSEPLQFSQYAAH 121
SVDT P +LLG+L S+KG+TS VAS CVL+ Y G LVN+++ SQ+ AH
Sbjct: 95 SVDTTTSPVSFFELLGVLESLKGITSNQVASQCVLQSYTSGNAQLVNRTDVQTLSQFTAH 154
Query: 122 FTTDSDQPQACNFANFAPFGEDGPLRRAEWIKFLGIFANAEARANQVYNAVK 173
F +D+D+ + CNFA + P E PL+ AEWIK+LG F N+E RAN VY+AVK
Sbjct: 155 FISDTDEDRGCNFAAYVPLEEGTPLQMAEWIKYLGTFTNSENRANAVYDAVK 206
>gi|414864432|tpg|DAA42989.1| TPA: hypothetical protein ZEAMMB73_964001 [Zea mays]
Length = 213
Score = 205 bits (522), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 92/176 (52%), Positives = 126/176 (71%)
Query: 74 KLLGLLSSMKGMTSESVASGCVLKLYQGGEIGLVNKSEPLQFSQYAAHFTTDSDQPQACN 133
+LLG+L S+KG+TS VAS CVL+ Y G LVN+++ SQ+ AHF +D+D+ + CN
Sbjct: 2 QLLGVLESLKGITSNQVASQCVLQSYTSGNAQLVNRTDVQTLSQFTAHFISDTDEDRGCN 61
Query: 134 FANFAPFGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPI 193
FA + P E PL+ AEWIK+LG F N+E RAN VY+AVK NYLCL++VAA FKP+
Sbjct: 62 FAAYVPLEEGTPLQMAEWIKYLGTFTNSENRANAVYDAVKTNYLCLSKVAANLGTRFKPV 121
Query: 194 VAWMEFYNGVWSFTKEAFKLKYVEDAGGENVDSSINKMTYNISNSDDLEQLHAILC 249
VAW+EF G+W+F KE++ L+YV DAG E VD++I +N S+ +D++ HAILC
Sbjct: 122 VAWIEFTQGMWTFVKESYILQYVTDAGAEIVDATITDKRFNSSDPEDMDNFHAILC 177
>gi|108705891|gb|ABF93686.1| expressed protein [Oryza sativa Japonica Group]
gi|215678860|dbj|BAG95297.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 215
Score = 175 bits (443), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 89/219 (40%), Positives = 129/219 (58%), Gaps = 39/219 (17%)
Query: 74 KLLGLLSSMKGMTSESVASGCVLKLYQGGEIGLVNKSEPLQFSQYAAHFTTDSDQPQACN 133
+LLG+L ++KG+TS+ +AS CVL+ Y G + L NK++ +Q++AHF + +D+ CN
Sbjct: 2 QLLGVLQNLKGITSDQIASQCVLQSYASGNVQLFNKTDAQMLTQFSAHFLSTTDE--GCN 59
Query: 134 FANFAPFGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPI 193
FA + P E PL+RAEWIK+LG F N+E RAN VY+A+K NYLCL++ AA + FKPI
Sbjct: 60 FAAYVPSEEGTPLQRAEWIKYLGAFTNSEDRANTVYDAIKANYLCLSKAAANLSTRFKPI 119
Query: 194 VAWMEFYNGVWSFTKEAFKL----------------------------------KYVEDA 219
VAW+EF G+W+F + + + +YV DA
Sbjct: 120 VAWIEFTQGMWTFVSDGWIVQVMSFVYCSTLNIKLSTKQMKWRQLMRIWYLCHKQYVTDA 179
Query: 220 GGENVDSSINKMTYNISNSDDLEQLHAILCTVDVVIDGT 258
G E VD++I +N S+ +D++ HAILC V ID T
Sbjct: 180 GAEVVDATITNKRFNNSDPEDMDNFHAILC---VSIDNT 215
>gi|358349534|ref|XP_003638790.1| hypothetical protein MTR_146s0005 [Medicago truncatula]
gi|355504725|gb|AES85928.1| hypothetical protein MTR_146s0005 [Medicago truncatula]
Length = 117
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 59/82 (71%), Positives = 72/82 (87%), Gaps = 1/82 (1%)
Query: 1 KPSDISKVEDAQNFHIYYGQTFKVIKNAIDGRSYLLIQNNSRMAARTKYCTARIKSFVIP 60
K + SKVEDA NFHIYYGQTF+VIKNA+DG+SYLL+QNNSR+A+RTKYCT+RIKSF IP
Sbjct: 34 KVGNFSKVEDAVNFHIYYGQTFRVIKNAVDGQSYLLLQNNSRIASRTKYCTSRIKSFFIP 93
Query: 61 MSNYSVDTDFFPGKLLGLLSSM 82
+SN+S DTD FPG + ++SSM
Sbjct: 94 LSNFSADTDSFPG-IPCIISSM 114
>gi|194702438|gb|ACF85303.1| unknown [Zea mays]
gi|414864433|tpg|DAA42990.1| TPA: hypothetical protein ZEAMMB73_964001 [Zea mays]
Length = 120
Score = 120 bits (300), Expect = 1e-24, Method: Composition-based stats.
Identities = 52/85 (61%), Positives = 61/85 (71%)
Query: 285 FLTNQSLWRFDKRNQNSLALDWFDGAVSQPQLVLADLTEALFPTGNYTITYFRNIAKGEG 344
F++N+S+WRFDKR S LDW DGA+SQPQLVL DL E FPTGNY YFRN+AK EG
Sbjct: 36 FVSNRSIWRFDKRIGASGTLDWSDGAISQPQLVLGDLIEIFFPTGNYITIYFRNLAKDEG 95
Query: 345 VVNIDAKMCDRDTSIPMEPTILPCQ 369
V I +MC R S PM+P IL C+
Sbjct: 96 VTEIGPEMCTRSISTPMDPIILSCE 120
>gi|281208714|gb|EFA82889.1| periplasmic binding protein [Polysphondylium pallidum PN500]
Length = 447
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 104/393 (26%), Positives = 178/393 (45%), Gaps = 46/393 (11%)
Query: 4 DISKVEDAQNFHIYYGQTFKVIKNAIDGRSYLLIQNNSRMAARTKYCTARIKSFVIPMSN 63
D ++V ++ F++ Y +++KVI + Y+L Q + ++ K F +P+ N
Sbjct: 42 DKAQVLNSTLFNVTYSKSYKVITTVSNNMQYVLYQCGTPKPDAAQFPNTT-KFFSVPV-N 99
Query: 64 YSVDTDFFPGKLLGLLSSMKGMT----SESVASGCVLKLYQGGEIGLVNKSEPLQFSQYA 119
S T P L++ MT ++ +A+ C+L+ + GEI ++ + ++ Q A
Sbjct: 100 SSAVTGTTPLSYFLLMAITNKMTYTGSAKLIAAPCILQGIEDGEIKELSSNATIKAQQLA 159
Query: 120 AH---FTTDSDQPQACNFANFAPFGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENY 176
+ F D+ + A++ + GPL R W+ F G+F NAEA AN+V++ + NY
Sbjct: 160 SVDVVFQGSFDKSTNNSVASYET-QDPGPLHRTGWVNFFGMFFNAEADANRVFSEISSNY 218
Query: 177 LCLTRVAAG-------KTKPFKPIVAWMEF-----YN---GVWSFTKEAFKLKYVEDAGG 221
C + KTK VAW + YN WS + A+K K DAG
Sbjct: 219 HCFANTSQSTLRQRQIKTKS----VAWTTYNAPSSYNQNTASWSISNAAYKSKLSTDAGA 274
Query: 222 ENVDSSINKMTYNISNS-DDLEQLHAILCTVDVVIDGTYTLEPANYTQSTFLENIDAAD- 279
+ N++NS D+ H ++ VDV+ID TY L ++ I+ +
Sbjct: 275 NFL---------NLANSTTDVTVFHELIKDVDVIIDETYQLN--SFDDFLMAYQINTTEM 323
Query: 280 KSCFAFLTNQSLWRFDKRNQNSLALDWFDGAVSQPQLVLADLTEALFPT---GNYTITYF 336
++ F F+ N+ ++R D DWF AV+ VL D+ A++P + +
Sbjct: 324 QAKFKFVANKVVFRQDGLENIYDGRDWFQSAVAFNDAVLQDVIRAVYPEVLPKSTLPLWL 383
Query: 337 RNIAKGEGVVNIDAKMCDRDTSIPM-EPTILPC 368
RNIA E + + A C + + E +L C
Sbjct: 384 RNIATNEPTLRMTADNCTTEVRPQIYEDRVLEC 416
>gi|159487357|ref|XP_001701689.1| flagellar associated protein [Chlamydomonas reinhardtii]
gi|158280908|gb|EDP06664.1| flagellar associated protein [Chlamydomonas reinhardtii]
Length = 537
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 111/376 (29%), Positives = 160/376 (42%), Gaps = 51/376 (13%)
Query: 4 DISKVEDAQNFHIYYGQTFKVIKN--AIDGRSYLLIQNNSRMAARTKY-CTARIKSFVIP 60
D + V AQNF + Y TFKV+ N +Y+L Q + Y A K +P
Sbjct: 59 DRTTVSVAQNFEVSYYSTFKVVTNLYTFAKETYVLYQCGTAAPNPADYGLPAATKVLAVP 118
Query: 61 MSNYSV-DTDFFP-GKLLGLLSSMKGMTSESVASGCVLKLYQGGEIGLVNKSEPLQFSQY 118
++ SV DT K+L +L + +T +V C+ L G + + +
Sbjct: 119 LTAVSVQDTTVLNFMKILNVLDRVAYVTPYAV-EPCMQALAGGSCNRTSDNAVADKIDGK 177
Query: 119 AAHFTTDSDQPQACNFANFAPFGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLC 178
F+ PQA F A + GPL RAE+IK++ F N EA AN +NA+ Y
Sbjct: 178 FVGFSVKPSDPQAITFTATA---DPGPLNRAEYIKYVATFFNREAAANTAFNAIVSAYNA 234
Query: 179 LTRVAA---GKTKPFKPIVAWMEFYNGVWSFTKE----------AFKLKYVEDAGGENVD 225
++AA K P+VAW+ + S T + A++ +YV+DAGG D
Sbjct: 235 NKQLAATYLSKNSAVSPLVAWIYYQPKYDSATYKAPEQVVLYFNAYRRQYVQDAGGRLHD 294
Query: 226 SSI------NKMTYNISNS--------DDLEQLHAILCTVDVVIDGTYTLEPANYTQSTF 271
+ N T +S S + L L IL +VDVVID ++ + N TQ T
Sbjct: 295 LAALNAQYGNNNTITVSGSQLVFTDLPNTLPVLRTILASVDVVIDESF-YDGKNPTQITL 353
Query: 272 LE------NIDAADKSCFAFLTNQSLWRFDKRNQNSLALDWFDGAVSQPQL--------V 317
+ DAA + FL NQ L R D WF+ AV++P + V
Sbjct: 354 DDFRALYGLTDAAALTDLKFLANQRLLRLDGSANPGGTTAWFEEAVARPDIVGPTRVDDV 413
Query: 318 LADLTEALFPTGNYTI 333
L DL A P +I
Sbjct: 414 LHDLVSAFLPNALLSI 429
>gi|297721757|ref|NP_001173242.1| Os03g0120000 [Oryza sativa Japonica Group]
gi|255674165|dbj|BAH91970.1| Os03g0120000 [Oryza sativa Japonica Group]
Length = 142
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 47/68 (69%), Positives = 57/68 (83%)
Query: 5 ISKVEDAQNFHIYYGQTFKVIKNAIDGRSYLLIQNNSRMAARTKYCTARIKSFVIPMSNY 64
+SKVEDA F IYYGQ+FKV+KN +G+SYLL+QN S+MA +TKYCT RIKSFVIP++NY
Sbjct: 51 VSKVEDATRFQIYYGQSFKVVKNNWNGKSYLLMQNTSKMATKTKYCTGRIKSFVIPLANY 110
Query: 65 SVDTDFFP 72
SVDT P
Sbjct: 111 SVDTTASP 118
>gi|414864430|tpg|DAA42987.1| TPA: hypothetical protein ZEAMMB73_964001 [Zea mays]
Length = 111
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 46/68 (67%), Positives = 59/68 (86%)
Query: 5 ISKVEDAQNFHIYYGQTFKVIKNAIDGRSYLLIQNNSRMAARTKYCTARIKSFVIPMSNY 64
+S+VEDA F IYYGQ+FKVIKN+ DG+SYLL+QN S+MA++TKYCT RIKSFVIP++++
Sbjct: 35 VSRVEDATMFRIYYGQSFKVIKNSGDGKSYLLMQNTSKMASKTKYCTGRIKSFVIPLASF 94
Query: 65 SVDTDFFP 72
SVDT P
Sbjct: 95 SVDTTTSP 102
>gi|302844123|ref|XP_002953602.1| hypothetical protein VOLCADRAFT_106040 [Volvox carteri f.
nagariensis]
gi|300261011|gb|EFJ45226.1| hypothetical protein VOLCADRAFT_106040 [Volvox carteri f.
nagariensis]
Length = 532
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 111/369 (30%), Positives = 167/369 (45%), Gaps = 62/369 (16%)
Query: 6 SKVEDAQNFHIYYGQTFKVIKNAID--GRSYLLIQNNSRMAARTKYCTARI------KSF 57
+ V AQ F I YG T+K++ A +YLL Q + TK ++I K F
Sbjct: 59 TTVTVAQEFEIAYGNTYKIVTIAKSDTNETYLLYQCGT-----TKPVLSQIGLPEDTKVF 113
Query: 58 VIPMSNYSV--DTDFFPGKLLGLLSSMKGMTSESVASGCVLKLYQGGEIGLVNKSEPLQF 115
+P+ SV T + +LG+ + +T V C+ L G + + P
Sbjct: 114 SVPLQAVSVADTTAMYFMDMLGVKDRVSYVTPY-VVDPCMQLLSSSVCGGRSSDNAPADA 172
Query: 116 SQYAAHFTTDSDQPQACNFANFAPFGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKEN 175
F D++ A N + E GPL AE+IK++ F N EA AN+ + AV
Sbjct: 173 VDGKFGFYKDAN---ASNSIMISATVELGPLHAAEYIKYVAAFFNREAVANRAFTAVYNA 229
Query: 176 YLCLT-RVAAGKT--KPFKPIVAWMEFYNGVWSFTKE-------AFKLKYVEDAGG---- 221
Y L+ V + KT P+VAW+ +Y +S + E +F+++Y EDAGG
Sbjct: 230 YTDLSASVLSYKTNNNVASPVVAWL-YYQAKYSSSPEQIQVKFHSFRVQYTEDAGGVLPN 288
Query: 222 ----ENV-----DSSINK----MTYNISNSDDLEQLHAILCTVDVVIDGTYTLEPAN--- 265
+NV D +N + YN+++++ L IL VD+VID +Y P N
Sbjct: 289 LAQLKNVLANYTDVKVNTVGDLVLYNLNSTNTAAALRTILADVDIVIDESYV--PGNVSQ 346
Query: 266 YTQSTFL------ENIDAADKSCFAFLTNQS-LWRFDKRNQNSLALDWFDGAVSQPQLVL 318
YT ++FL E+ A D F FL Q+ L R D WF+ AV++P +VL
Sbjct: 347 YTVASFLARYRLNESTAATD---FKFLRTQNGLLRLDGTANAMGTTAWFEEAVARPDVVL 403
Query: 319 ADLTEALFP 327
DL + P
Sbjct: 404 HDLVTFIMP 412
>gi|302844121|ref|XP_002953601.1| hypothetical protein VOLCADRAFT_106039 [Volvox carteri f.
nagariensis]
gi|300261010|gb|EFJ45225.1| hypothetical protein VOLCADRAFT_106039 [Volvox carteri f.
nagariensis]
Length = 505
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 104/364 (28%), Positives = 159/364 (43%), Gaps = 52/364 (14%)
Query: 6 SKVEDAQNFHIYYGQTFKVIKNAID--GRSYLLIQNNSRMAARTKY-CTARIKSFVIPMS 62
+ V Q F I YG T+K++ A +YLL Q + ++ A K F +P+
Sbjct: 56 TTVTFVQEFKIAYGNTYKIVTIARSDTNETYLLYQCGTTKPVLSQIGLPANTKVFSVPLQ 115
Query: 63 NYSV--DTDFFPGKLLGLLSSMKGMTSESVASGCVLKLYQGGEIGLVNKSEPLQFSQYAA 120
SV T + +LG+ + +T V C+ L G + + P
Sbjct: 116 AVSVADTTAMYFMDMLGVKDRVSYVT-PYVVDPCMQLLSSSVCGGRSSDNAPADAVDGKF 174
Query: 121 HFTTDSDQPQACNFANFAPFGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCL- 179
F D++ N + E GPL AE+IK++ F N EA AN+ + AV Y L
Sbjct: 175 DFYKDAN---VSNSIMISVTAELGPLHAAEYIKYVAAFFNREAVANRAFTAVYNAYTELA 231
Query: 180 TRVAAGKT--KPFKPIVAWMEFYNGVWSFTKE-------AFKLKYVEDAGG--------- 221
V + KT P+VAW+ +Y +S + E +F+++Y EDAGG
Sbjct: 232 ASVLSYKTNNNVASPVVAWL-YYQAKYSSSPEQIQIKFHSFRVQYTEDAGGVLPNLAQLK 290
Query: 222 ----ENVDSSINK----MTYNISNSDDLEQLHAILCTVDVVIDGTYTLEPAN---YTQST 270
D +N + YN+++++ L IL V++VID +Y P N YT ++
Sbjct: 291 TVLANYTDVKVNTVGDLVLYNLNSTNTAAALRTILANVNIVIDESYV--PGNVSQYTVAS 348
Query: 271 FL------ENIDAADKSCFAFLTNQS-LWRFDKRNQNSLALDWFDGAVSQPQLVLADLTE 323
FL E+ A D F FL Q+ L R D WF+ AV++P +VL DL
Sbjct: 349 FLARYRLNESTAATD---FKFLRTQNGLLRLDGTANAMGTTAWFEEAVARPDVVLHDLVT 405
Query: 324 ALFP 327
+ P
Sbjct: 406 FIMP 409
>gi|255076789|ref|XP_002502063.1| predicted protein [Micromonas sp. RCC299]
gi|226517328|gb|ACO63321.1| predicted protein [Micromonas sp. RCC299]
Length = 492
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 112/403 (27%), Positives = 159/403 (39%), Gaps = 61/403 (15%)
Query: 6 SKVEDAQNFHIYYGQTFKVIKNAI--DGRSYLLIQNNSRMAARTKYCTARIKSFVIPMSN 63
++V A +F I Y + FKV+KN + ++Y+L S + + TA I+S S
Sbjct: 57 AEVTVAGDFSITYHKHFKVLKNLLVTPAKTYVLRMCGSDVPTKYPNGTA-IESDAKHFSV 115
Query: 64 Y--------SVDTDFFPGKLLGLLSSMKGMTSESVASGCVLKLYQGGEIGLVNKSEPLQF 115
S+ F + L LL +K + V S C+ + G I L S L
Sbjct: 116 PVKGVGVGGSIPMAFL--EQLDLLDKIKVADPQYVHSPCIRNAEKAGTI-LGQGSGHLHA 172
Query: 116 SQYAAH---------FTTDSDQPQACNFAN---FAPFGEDGPLRRAEWIKFLGIFANAEA 163
+ +A TDS AC+ F P +D PL RAEWIK++ F N E
Sbjct: 173 AGWANKTKDNDAVELVVTDSWNTGACSCDKDVVFDPSTDDTPLGRAEWIKYISTFFNEEG 232
Query: 164 RANQVYNAVKENYLCLTRVA-------AGKTKPFKPIVAWM-----EFYNGVWSFTKEAF 211
RAN + K Y ++A A KP K AW+ +N W +
Sbjct: 233 RANVAFAREKAAYDATKKIAKDAADVHASLQKPKKK-CAWVNEAYDSNWNSYWKLDIAPY 291
Query: 212 KLKYVEDAGGENV-DSSINKMTYNISNSDDLEQLHAILCTVDVVIDGTYTLEPANY--TQ 268
KL Y DAG E V D N S + +L L VDVVID TY +PA T+
Sbjct: 292 KLAYCADAGMEAVTDKDSQGYAKNYVKSGN--RLTNALADVDVVIDETYDSDPATNLDTK 349
Query: 269 STFLENIDAADKSCFAFL-----------TNQSLWRFDKRNQNSLALDWFDGAVSQPQLV 317
L + K L T+ + + N + + W + V +P V
Sbjct: 350 EKVLAKLGITLKEGAVLLRLDRELSDNSATSTKFYEINSGN-SGINWAWSESGVLRPAHV 408
Query: 318 LADLTEALFPTGNYTI-----TYFRNIAKGEGVVNIDAKMCDR 355
L L A++P I YFR++ GE V D C +
Sbjct: 409 LQGLVHAVWPNSVKEIDPACVDYFRDVTAGEKPVVKDHTHCTK 451
>gi|384501118|gb|EIE91609.1| hypothetical protein RO3G_16320 [Rhizopus delemar RA 99-880]
Length = 544
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 93/365 (25%), Positives = 156/365 (42%), Gaps = 51/365 (13%)
Query: 2 PSDISKVEDAQN-FHIYYGQTFKVIKNAIDGRSYLLIQNNSRMAARTKYCTARIKSFVIP 60
P I+ +D N F I Y +K+++N G SY+L+Q + + T + + IP
Sbjct: 43 PEKINAADDKANYFTIEYHNNYKLMENRKTGESYMLVQCGTPTPSNISNGT---EVYQIP 99
Query: 61 MSNYSV-DTDFFPG-KLLGLLSSMKGMTSES-VASGCVLKLYQGG---EIGLVNKS-EPL 113
++ ++ +T P +++G S+ + +AS C K + G E+ N++ +
Sbjct: 100 ITKVAIMETSIVPYLEMIGAAQSISLVADGGLIASPCFQKYLKTGNVTELDATNQTLQAQ 159
Query: 114 QFSQYAAHFTTD--SDQPQACNFANFAP-FGEDGPLRRAEWIKFLGIFANAEARANQVYN 170
Q A F ++ + P N + A E L RA WI + F N E AN V
Sbjct: 160 QIDNVQAQFGSNPYAYTPIDANTSVTASEVYEPDVLGRASWISYYAAFYNREGIANSVRQ 219
Query: 171 AVKENYLCLTRVAAGKTKPFKPIVAWMEF-----YN---GVWSFTKEAFKLKYVEDAGGE 222
+ +NY L K KP+VAW + YN + + +K + +DA E
Sbjct: 220 KMTDNYNRLKTATTNYNK--KPVVAWTTYNAPSQYNNNTASYLLSTAQYKTQLTQDAATE 277
Query: 223 NVDSSINKMTYNISNSDDLEQLHAILCTVDVVIDGTYTLEPANYTQSTFLEN--IDAADK 280
L +++ + D++ID TY N T FL+N I AD
Sbjct: 278 ---------------------LLSVISSADILIDETYI--GTNLTD--FLKNYGIPQADV 312
Query: 281 SCFAFLTNQSLWRFDKRNQNSLALDWFDGAVSQPQLVLADLTEALFPTGNYTITYFRNIA 340
+ FL ++++R D S DWF+ V +L D+ + P+ ++ +FRNIA
Sbjct: 313 DKYTFLKQKAVYREDGILTASGGYDWFEAPVVMADALLEDMINVVNPSSPFSRQWFRNIA 372
Query: 341 KGEGV 345
E +
Sbjct: 373 LEEPI 377
>gi|295129637|ref|YP_003580300.1| hypothetical protein HMPREF0675_3109 [Propionibacterium acnes
SK137]
gi|291376634|gb|ADE00489.1| conserved hypothetical protein [Propionibacterium acnes SK137]
Length = 387
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 91/334 (27%), Positives = 141/334 (42%), Gaps = 43/334 (12%)
Query: 10 DAQNFHIYYGQTFKVI------KNAIDGRSYLLIQNNSRMAARTKYCTARIKSFVIPMSN 63
DA++ + Y +++K++ A Y+L+Q + A+ + IP +
Sbjct: 64 DARDITVSYHKSYKIVTLKHPSNTATKPVQYVLVQCGA-PDPHLDGELAKAQRITIPTTK 122
Query: 64 YSVDTDFFPGK--LLGLLSSMKGMTSESVASGCVLKLYQGGEIGLVNKSEPLQFSQYAAH 121
++ + P K +LG L S+ GM + +G + + L+ + A+
Sbjct: 123 VALGSTTLPMKFQMLGKLDSVAGMVNVD-------------RVGNPDTRQALKDHKVASF 169
Query: 122 FTTDS----DQPQACNFANFAP--FGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKEN 175
D+ D+ + A F E PL RAEWIK+ +F NAE ANQ Y+ + E
Sbjct: 170 AAGDNATEIDKIKEIGIPVVAEPNFLESTPLGRAEWIKYDSLFVNAEKTANQKYDEIAEK 229
Query: 176 YLCLT-RVAAGKTKPFKPIVAWMEFYNGVWSFT-KEAFKLKYVEDAGGENVDSSINKMTY 233
Y R A KT +P V Y GVW E + ++++ DAGGE V ++ +
Sbjct: 230 YHATAKRTAKVKT---RPTVLHGSQYKGVWYIKPNENYAIQFLRDAGGEYVFKDLHGVA- 285
Query: 234 NISNSDDLEQLHAILCTVDVVIDGTYTLEPANYTQSTFLENIDAADKSCFAFLTNQSLWR 293
S D E + D IDG P + L+ D KS A L N ++W
Sbjct: 286 --SRKLDTEAVIKQAHDADFWIDG-----PEKSSIPQILK-ADPRLKSLKA-LDNGNVWD 336
Query: 294 FDKRNQNSLALDWFDGAVSQPQLVLADLTEALFP 327
R D++ V +P LVLADLT L P
Sbjct: 337 ATLRADPKHGNDYWQTGVVRPDLVLADLTAILHP 370
>gi|417930420|ref|ZP_12573796.1| periplasmic-binding protein [Propionibacterium acnes SK182]
gi|422492351|ref|ZP_16568659.1| conserved domain protein [Propionibacterium acnes HL086PA1]
gi|313839740|gb|EFS77454.1| conserved domain protein [Propionibacterium acnes HL086PA1]
gi|340772038|gb|EGR94551.1| periplasmic-binding protein [Propionibacterium acnes SK182]
Length = 387
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 91/334 (27%), Positives = 141/334 (42%), Gaps = 43/334 (12%)
Query: 10 DAQNFHIYYGQTFKVI------KNAIDGRSYLLIQNNSRMAARTKYCTARIKSFVIPMSN 63
DA++ + Y +++K++ A Y+L+Q + A+ + IP +
Sbjct: 64 DARDITVSYHKSYKIVTLKHPSNTATKPVQYVLVQCGA-PDPHLDGELAKAQRITIPTTK 122
Query: 64 YSVDTDFFPGK--LLGLLSSMKGMTSESVASGCVLKLYQGGEIGLVNKSEPLQFSQYAAH 121
++ + P K +LG L S+ GM + +G + + L+ + A+
Sbjct: 123 VALGSTTLPMKFQMLGKLDSVAGMVNVD-------------RVGNPDTRQALKDHKVASF 169
Query: 122 FTTDS----DQPQACNFANFAP--FGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKEN 175
D+ D+ + A F E PL RAEWIK+ +F NAE ANQ Y+ + E
Sbjct: 170 AAGDNATEIDKIKEIGIPVVAEPNFLESTPLGRAEWIKYDSLFVNAEKTANQKYDEIAEK 229
Query: 176 YLCLT-RVAAGKTKPFKPIVAWMEFYNGVWSFT-KEAFKLKYVEDAGGENVDSSINKMTY 233
Y R A KT +P V Y GVW E + ++++ DAGGE V ++ +
Sbjct: 230 YHATAKRTAKVKT---RPTVLHGSQYKGVWYIKPNENYAIQFLRDAGGEYVFKDLHGVA- 285
Query: 234 NISNSDDLEQLHAILCTVDVVIDGTYTLEPANYTQSTFLENIDAADKSCFAFLTNQSLWR 293
S D E + D IDG P + L+ D KS A L N ++W
Sbjct: 286 --SRKLDTEAVIKQAHDADFWIDG-----PEKSSIPQILK-ADPRLKSLKA-LDNGNVWD 336
Query: 294 FDKRNQNSLALDWFDGAVSQPQLVLADLTEALFP 327
R D++ V +P LVLADLT L P
Sbjct: 337 ATLRADPKHGNDYWQTGVVRPDLVLADLTAILHP 370
>gi|422562149|ref|ZP_16637827.1| periplasmic binding protein [Propionibacterium acnes HL046PA1]
gi|315102116|gb|EFT74092.1| periplasmic binding protein [Propionibacterium acnes HL046PA1]
Length = 414
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 95/354 (26%), Positives = 145/354 (40%), Gaps = 44/354 (12%)
Query: 4 DISKVEDAQNFHIYYGQTFKVI------KNAIDGRSYLLIQNNSRMAARTKYCTARIKSF 57
D + + DA++ + Y +++KV+ A Y+L+Q S A+ +
Sbjct: 58 DKATLGDARDITVSYHKSYKVVTLKHPSNTATKPVQYVLVQC-SVPDPHLDGELAKAQRI 116
Query: 58 VIPMSNYSVDTDFFPGK--LLGLLSSMKGM----------TSESVASGCVLKLYQGGEIG 105
IP + ++ + P K +LG L S+ GM T +++ V G
Sbjct: 117 TIPTTKVALGSTTLPMKFQMLGKLDSVAGMVNVDRVGNPDTRQALKDHKVASFAAGDNAT 176
Query: 106 LVN--KSEPLQFSQYAAHFTTDSDQPQACN--------FANFAPFGEDGPLRRAEWIKFL 155
+N K L+ + + + SD + F E PL RAEWIK+
Sbjct: 177 EINTEKLAALRPDLFIFNLVSGSDNTSKIDKIKEMGIPVVAEPNFLESTPLGRAEWIKYD 236
Query: 156 GIFANAEARANQVYNAVKENYLCLT-RVAAGKTKPFKPIVAWMEFYNGVWSFT-KEAFKL 213
+F NAE ANQ Y+ + E Y R A KT +P V Y GVW E + +
Sbjct: 237 SLFVNAEKTANQKYDEIAEKYHATAKRTAKVKT---RPTVLHGSQYKGVWYIKPNENYAI 293
Query: 214 KYVEDAGGENVDSSINKMTYNISNSDDLEQLHAILCTVDVVIDGTYTLEPANYTQSTFLE 273
+++ DAGGE V ++ + S D E + D IDG P + L+
Sbjct: 294 QFLRDAGGEYVFKDLHGVA---SRKLDTEAVIKQAHDADFWIDG-----PEKSSIPQILK 345
Query: 274 NIDAADKSCFAFLTNQSLWRFDKRNQNSLALDWFDGAVSQPQLVLADLTEALFP 327
D KS A L N ++W R D++ V +P LVLA+LT L P
Sbjct: 346 -ADPRLKSLKA-LDNGNMWDATPRADPKHGNDYWQTGVVRPDLVLANLTAILHP 397
>gi|419420336|ref|ZP_13960565.1| periplasmic-binding protein of ABC transporter [Propionibacterium
acnes PRP-38]
gi|422394772|ref|ZP_16474813.1| periplasmic-binding protein of ABC transporter [Propionibacterium
acnes HL097PA1]
gi|327334670|gb|EGE76381.1| periplasmic-binding protein of ABC transporter [Propionibacterium
acnes HL097PA1]
gi|379978710|gb|EIA12034.1| periplasmic-binding protein of ABC transporter [Propionibacterium
acnes PRP-38]
Length = 414
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 94/354 (26%), Positives = 145/354 (40%), Gaps = 44/354 (12%)
Query: 4 DISKVEDAQNFHIYYGQTFKVI------KNAIDGRSYLLIQNNSRMAARTKYCTARIKSF 57
D + + DA++ + Y +++KV+ A Y+L+Q + A+ +
Sbjct: 58 DKATLGDARDITVSYHKSYKVVTLKHPSNTATKPVQYVLVQCGA-PDPHLDGELAKAQRI 116
Query: 58 VIPMSNYSVDTDFFPGK--LLGLLSSMKGM----------TSESVASGCVLKLYQGGEIG 105
IP + ++ + P K +LG L S+ GM T +++ V G
Sbjct: 117 TIPTTKVALGSTTLPMKFQMLGKLDSVAGMVNVDRVGNPDTRQALKDHKVASFAAGDNAT 176
Query: 106 LVN--KSEPLQFSQYAAHFTTDSDQPQACN--------FANFAPFGEDGPLRRAEWIKFL 155
+N K L+ + + + SD + F E PL RAEWIK+
Sbjct: 177 EINTEKLAALRPDLFIFNLVSGSDNTSKIDKIKEMGIPVVAEPNFLESTPLGRAEWIKYD 236
Query: 156 GIFANAEARANQVYNAVKENYLCLT-RVAAGKTKPFKPIVAWMEFYNGVWSFT-KEAFKL 213
+F NAE ANQ Y+ + E Y R A KT +P V Y GVW E + +
Sbjct: 237 SLFVNAEKTANQKYDEIAEKYHATAKRTAKVKT---RPTVLHGSQYKGVWYIKPNENYAI 293
Query: 214 KYVEDAGGENVDSSINKMTYNISNSDDLEQLHAILCTVDVVIDGTYTLEPANYTQSTFLE 273
+++ DAGGE V ++ + S D E + D IDG P + L+
Sbjct: 294 QFLRDAGGEYVFKDLHGVA---SRKLDTEAVIKQAHDADFWIDG-----PEKSSIPQILK 345
Query: 274 NIDAADKSCFAFLTNQSLWRFDKRNQNSLALDWFDGAVSQPQLVLADLTEALFP 327
D KS A L N ++W R D++ V +P LVLA+LT L P
Sbjct: 346 -ADPRLKSLKA-LDNGNMWDATPRADPKHGNDYWQTGVVRPDLVLANLTAILHP 397
>gi|335052588|ref|ZP_08545467.1| ABC transporter, substrate-binding protein [Propionibacterium sp.
409-HC1]
gi|342212095|ref|ZP_08704820.1| periplasmic-binding protein [Propionibacterium sp. CC003-HC2]
gi|422494544|ref|ZP_16570839.1| periplasmic binding protein [Propionibacterium acnes HL025PA1]
gi|313814107|gb|EFS51821.1| periplasmic binding protein [Propionibacterium acnes HL025PA1]
gi|333763164|gb|EGL40627.1| ABC transporter, substrate-binding protein [Propionibacterium sp.
409-HC1]
gi|340767639|gb|EGR90164.1| periplasmic-binding protein [Propionibacterium sp. CC003-HC2]
Length = 414
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 94/348 (27%), Positives = 142/348 (40%), Gaps = 44/348 (12%)
Query: 10 DAQNFHIYYGQTFKVI------KNAIDGRSYLLIQNNSRMAARTKYCTARIKSFVIPMSN 63
DA++ + Y +++KV+ A Y+L+Q + A+ + IP +
Sbjct: 64 DARDITVSYHKSYKVVTLKHPSNTATKPVQYVLVQCGA-PDPHLDGELAKAQRITIPTTK 122
Query: 64 YSVDTDFFPGK--LLGLLSSMKGM----------TSESVASGCVLKLYQGGEIGLVN--K 109
++ + P K +LG L S+ GM T +++ V G +N K
Sbjct: 123 VALGSTTLPMKFQMLGKLDSVAGMVNVDRVGNPDTRQALKDHKVASFAAGDNATEINTEK 182
Query: 110 SEPLQFSQYAAHFTTDSDQPQACN--------FANFAPFGEDGPLRRAEWIKFLGIFANA 161
L+ + + + SD + F E PL RAEWIK+ +F NA
Sbjct: 183 LAALRPDLFIFNLVSGSDNTSKIDKIKEMGIPVVAEPNFLESTPLGRAEWIKYDSLFVNA 242
Query: 162 EARANQVYNAVKENYLCLT-RVAAGKTKPFKPIVAWMEFYNGVWSFT-KEAFKLKYVEDA 219
E ANQ Y+ + E Y R A KT +P V Y GVW E + ++++ DA
Sbjct: 243 EKTANQKYDEIAEKYHATAKRTAKVKT---RPTVLHGSQYKGVWYIKPNENYAIQFLRDA 299
Query: 220 GGENVDSSINKMTYNISNSDDLEQLHAILCTVDVVIDGTYTLEPANYTQSTFLENIDAAD 279
GGE V ++ + S D E + D IDG P + L+ D
Sbjct: 300 GGEYVFKDLHGVA---SRKLDTEAVIKQAHDADFWIDG-----PEKSSIPQILK-ADPRL 350
Query: 280 KSCFAFLTNQSLWRFDKRNQNSLALDWFDGAVSQPQLVLADLTEALFP 327
KS A L N ++W R D++ V +P LVLADLT L P
Sbjct: 351 KSLKA-LDNGNVWDATLRADPKHGNDYWQTGVVRPDLVLADLTAILHP 397
>gi|350568660|ref|ZP_08937058.1| iron (Fe) ABC superfamily ATP binding cassette transporter, binding
protein [Propionibacterium avidum ATCC 25577]
gi|348660903|gb|EGY77599.1| iron (Fe) ABC superfamily ATP binding cassette transporter, binding
protein [Propionibacterium avidum ATCC 25577]
Length = 428
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 89/367 (24%), Positives = 159/367 (43%), Gaps = 45/367 (12%)
Query: 4 DISKVEDAQNFHIYYGQTFKVI--KNAIDGRS----YLLIQNNSRMAARTKYCTARIKSF 57
D + DA+ + Y +++KV+ KN S Y+L+Q + + A+ +
Sbjct: 71 DKATFSDARGLTVTYHKSYKVVTVKNPSSTSSKETKYVLVQCGAPQP-KLNGDLAKAQKI 129
Query: 58 VIPMSNYSVDTDFFPGK--LLGLLSSMKGMTSESVA----SGCVLKLYQGGEIGLVNKSE 111
+P + ++ + P K ++ L ++ GM S + + LK + G+ + +
Sbjct: 130 TVPTTRVALGSTTEPMKFQMMNKLDAVIGMASVDMVGDPKTRQALKDAHVADFGVGDGTT 189
Query: 112 PLQFSQYAA-----HFTTDSDQPQACNFANFAPFG----------EDGPLRRAEWIKFLG 156
+ + AA + D P FA G E+ PL RAEWIK+
Sbjct: 190 EVNTEKLAALRPDLFIISGHDDP--SKFAKVREMGTPVVAEPDFLENTPLGRAEWIKYDA 247
Query: 157 IFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEFYNGVWSF-TKEAFKLKY 215
+F NAE AN+ Y+ + + Y ++ + K K +PIV + + GVW + E + +++
Sbjct: 248 LFVNAEKVANEKYDEIAKKYHETAQLTS-KVK-TRPIVLYGSQFKGVWYIKSNENYSIQF 305
Query: 216 VEDAGGENVDSSINKMTYNISNSDDLEQLHAILCTVDVVIDGTYTLEPANYTQSTFLENI 275
+ DAGGE V ++ + +S+ D E + D IDG N +Q + I
Sbjct: 306 LRDAGGEYVFKDVHGV---VSSKLDTETVLKRAHDADFWIDGQI-----NESQKASIPTI 357
Query: 276 DAADKSCFAF--LTNQSLWRFDKRNQNSLALDWFDGAVSQPQLVLADLTEALFP--TGNY 331
D A + ++W R D++ V +P LVLADL+ L P + N+
Sbjct: 358 VKDDPRMKALKAVRTGTVWNAVLRADPKHGNDYWQTGVVRPDLVLADLSAILHPELSPNH 417
Query: 332 TITYFRN 338
T+++
Sbjct: 418 EFTFYKK 424
>gi|386070644|ref|YP_005985540.1| periplasmic-binding protein of ABC transporter [Propionibacterium
acnes ATCC 11828]
gi|353455010|gb|AER05529.1| periplasmic-binding protein of ABC transporter [Propionibacterium
acnes ATCC 11828]
Length = 414
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 94/348 (27%), Positives = 142/348 (40%), Gaps = 44/348 (12%)
Query: 10 DAQNFHIYYGQTFKVI------KNAIDGRSYLLIQNNSRMAARTKYCTARIKSFVIPMSN 63
DA++ + Y +++KV+ A Y+L+Q S A+ + IP +
Sbjct: 64 DARDITVSYHKSYKVVTLKHPSNTATKPVQYVLVQC-SAPDPHLDGELAKAQRITIPTTK 122
Query: 64 YSVDTDFFPGK--LLGLLSSMKGM----------TSESVASGCVLKLYQGGEIGLVN--K 109
++ + P K +LG L S+ GM T +++ V G +N K
Sbjct: 123 VALGSTTLPMKFQMLGKLDSVAGMVNVDRVGNPDTRQALKDHKVASFAAGDNATEINTEK 182
Query: 110 SEPLQFSQYAAHFTTDSDQPQACN--------FANFAPFGEDGPLRRAEWIKFLGIFANA 161
L+ + + + SD + F E PL RAEWIK+ +F NA
Sbjct: 183 LAALRPDLFIFNLVSGSDNTSKIDKIKEMGIPVVAEPNFLESTPLGRAEWIKYDSLFVNA 242
Query: 162 EARANQVYNAVKENYLCLT-RVAAGKTKPFKPIVAWMEFYNGVWSFT-KEAFKLKYVEDA 219
E ANQ Y+ + E Y R A KT +P V Y GVW E + ++++ DA
Sbjct: 243 EKTANQKYDEIAEKYHATAKRTAKVKT---RPTVLHGSQYKGVWYIKPNENYAIQFLRDA 299
Query: 220 GGENVDSSINKMTYNISNSDDLEQLHAILCTVDVVIDGTYTLEPANYTQSTFLENIDAAD 279
GGE V ++ + S D E + D IDG P + L+ D
Sbjct: 300 GGEYVFKDLHGVA---SRKLDTEAVIKQAHDADFWIDG-----PEKSSIPQILK-ADPRL 350
Query: 280 KSCFAFLTNQSLWRFDKRNQNSLALDWFDGAVSQPQLVLADLTEALFP 327
KS A L N ++W R D++ V +P LVLA+LT L P
Sbjct: 351 KSLKA-LDNGNMWDATPRADPKHGNDYWQTGVVRPDLVLANLTAILHP 397
>gi|289424731|ref|ZP_06426514.1| periplasmic binding protein [Propionibacterium acnes SK187]
gi|289427393|ref|ZP_06429106.1| periplasmic binding protein [Propionibacterium acnes J165]
gi|386023051|ref|YP_005941354.1| periplasmic binding protein [Propionibacterium acnes 266]
gi|422384074|ref|ZP_16464215.1| periplasmic-binding protein of ABC transporter [Propionibacterium
acnes HL096PA3]
gi|422429326|ref|ZP_16506231.1| periplasmic binding protein [Propionibacterium acnes HL072PA2]
gi|422447880|ref|ZP_16524612.1| periplasmic binding protein [Propionibacterium acnes HL036PA3]
gi|422479319|ref|ZP_16555729.1| periplasmic binding protein [Propionibacterium acnes HL063PA1]
gi|422481925|ref|ZP_16558324.1| periplasmic binding protein [Propionibacterium acnes HL036PA1]
gi|422488008|ref|ZP_16564339.1| periplasmic binding protein [Propionibacterium acnes HL013PA2]
gi|422489448|ref|ZP_16565775.1| periplasmic binding protein [Propionibacterium acnes HL020PA1]
gi|422497617|ref|ZP_16573890.1| periplasmic binding protein [Propionibacterium acnes HL002PA3]
gi|422504543|ref|ZP_16580777.1| periplasmic binding protein [Propionibacterium acnes HL036PA2]
gi|422509015|ref|ZP_16585173.1| periplasmic binding protein [Propionibacterium acnes HL046PA2]
gi|422514010|ref|ZP_16590131.1| periplasmic binding protein [Propionibacterium acnes HL087PA2]
gi|422534962|ref|ZP_16610885.1| periplasmic binding protein [Propionibacterium acnes HL072PA1]
gi|422567362|ref|ZP_16642988.1| periplasmic binding protein [Propionibacterium acnes HL002PA2]
gi|289155428|gb|EFD04110.1| periplasmic binding protein [Propionibacterium acnes SK187]
gi|289159323|gb|EFD07514.1| periplasmic binding protein [Propionibacterium acnes J165]
gi|313806976|gb|EFS45474.1| periplasmic binding protein [Propionibacterium acnes HL087PA2]
gi|313817760|gb|EFS55474.1| periplasmic binding protein [Propionibacterium acnes HL046PA2]
gi|313821413|gb|EFS59127.1| periplasmic binding protein [Propionibacterium acnes HL036PA1]
gi|313824641|gb|EFS62355.1| periplasmic binding protein [Propionibacterium acnes HL036PA2]
gi|313826310|gb|EFS64024.1| periplasmic binding protein [Propionibacterium acnes HL063PA1]
gi|314926456|gb|EFS90287.1| periplasmic binding protein [Propionibacterium acnes HL036PA3]
gi|314961448|gb|EFT05549.1| periplasmic binding protein [Propionibacterium acnes HL002PA2]
gi|314980136|gb|EFT24230.1| periplasmic binding protein [Propionibacterium acnes HL072PA2]
gi|315086728|gb|EFT58704.1| periplasmic binding protein [Propionibacterium acnes HL002PA3]
gi|315088132|gb|EFT60108.1| periplasmic binding protein [Propionibacterium acnes HL072PA1]
gi|327333792|gb|EGE75509.1| periplasmic-binding protein of ABC transporter [Propionibacterium
acnes HL096PA3]
gi|327444745|gb|EGE91399.1| periplasmic binding protein [Propionibacterium acnes HL013PA2]
gi|328757858|gb|EGF71474.1| periplasmic binding protein [Propionibacterium acnes HL020PA1]
gi|332674507|gb|AEE71323.1| periplasmic binding protein [Propionibacterium acnes 266]
gi|456740606|gb|EMF65118.1| periplasmic binding protein [Propionibacterium acnes FZ1/2/0]
Length = 414
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 93/348 (26%), Positives = 142/348 (40%), Gaps = 44/348 (12%)
Query: 10 DAQNFHIYYGQTFKVI------KNAIDGRSYLLIQNNSRMAARTKYCTARIKSFVIPMSN 63
DA++ + Y +++K++ A Y+L+Q + A+ + IP +
Sbjct: 64 DARDITVSYHKSYKIVTLKHPSNTATKPVQYVLVQCGA-PDPHLDGELAKAQRITIPTTK 122
Query: 64 YSVDTDFFPGK--LLGLLSSMKGM----------TSESVASGCVLKLYQGGEIGLVN--K 109
++ + P K +LG L S+ GM T +++ V G +N K
Sbjct: 123 VALGSTTLPMKFQMLGKLDSVAGMVNVDRVGNPDTRQALKDHKVASFAAGDNATEINTEK 182
Query: 110 SEPLQFSQYAAHFTTDSDQPQACN--------FANFAPFGEDGPLRRAEWIKFLGIFANA 161
L+ + + + SD + F E PL RAEWIK+ +F NA
Sbjct: 183 LAALRPDLFIFNLVSGSDNTSKIDKIKEMGIPVVAEPNFLESTPLGRAEWIKYDSLFVNA 242
Query: 162 EARANQVYNAVKENYLCLT-RVAAGKTKPFKPIVAWMEFYNGVWSFT-KEAFKLKYVEDA 219
E ANQ Y+ + E Y R A KT +P V Y GVW E + ++++ DA
Sbjct: 243 EKTANQKYDEIAEKYHATAKRTAKVKT---RPTVLHGSQYKGVWYIKPNENYAIQFLRDA 299
Query: 220 GGENVDSSINKMTYNISNSDDLEQLHAILCTVDVVIDGTYTLEPANYTQSTFLENIDAAD 279
GGE V ++ + S D E + D IDG P + L+ D
Sbjct: 300 GGEYVFKDLHGVA---SRKLDTEAVIKQAHDADFWIDG-----PEKSSIPQILK-ADPRL 350
Query: 280 KSCFAFLTNQSLWRFDKRNQNSLALDWFDGAVSQPQLVLADLTEALFP 327
KS A L N ++W R D++ V +P LVLADLT L P
Sbjct: 351 KSLKA-LDNGNVWDATLRADPKHGNDYWQTGVVRPDLVLADLTAILHP 397
>gi|354606034|ref|ZP_09024007.1| hypothetical protein HMPREF1003_00574 [Propionibacterium sp.
5_U_42AFAA]
gi|407934478|ref|YP_006850120.1| periplasmic binding protein [Propionibacterium acnes C1]
gi|422386897|ref|ZP_16467014.1| periplasmic-binding protein of ABC transporter [Propionibacterium
acnes HL096PA2]
gi|422394070|ref|ZP_16474117.1| periplasmic-binding protein of ABC transporter [Propionibacterium
acnes HL099PA1]
gi|422424080|ref|ZP_16501031.1| periplasmic binding protein [Propionibacterium acnes HL043PA1]
gi|422460837|ref|ZP_16537471.1| periplasmic binding protein [Propionibacterium acnes HL038PA1]
gi|422475777|ref|ZP_16552222.1| periplasmic binding protein [Propionibacterium acnes HL056PA1]
gi|422476349|ref|ZP_16552788.1| periplasmic binding protein [Propionibacterium acnes HL007PA1]
gi|422484905|ref|ZP_16561272.1| periplasmic binding protein [Propionibacterium acnes HL043PA2]
gi|422519628|ref|ZP_16595674.1| periplasmic binding protein [Propionibacterium acnes HL074PA1]
gi|422520402|ref|ZP_16596444.1| periplasmic binding protein [Propionibacterium acnes HL045PA1]
gi|422525478|ref|ZP_16601480.1| periplasmic binding protein [Propionibacterium acnes HL083PA1]
gi|422527926|ref|ZP_16603913.1| periplasmic binding protein [Propionibacterium acnes HL053PA1]
gi|422559445|ref|ZP_16635173.1| periplasmic binding protein [Propionibacterium acnes HL005PA1]
gi|313771222|gb|EFS37188.1| periplasmic binding protein [Propionibacterium acnes HL074PA1]
gi|313811885|gb|EFS49599.1| periplasmic binding protein [Propionibacterium acnes HL083PA1]
gi|313832074|gb|EFS69788.1| periplasmic binding protein [Propionibacterium acnes HL007PA1]
gi|313832881|gb|EFS70595.1| periplasmic binding protein [Propionibacterium acnes HL056PA1]
gi|314975314|gb|EFT19409.1| periplasmic binding protein [Propionibacterium acnes HL053PA1]
gi|314977729|gb|EFT21824.1| periplasmic binding protein [Propionibacterium acnes HL045PA1]
gi|314985296|gb|EFT29388.1| periplasmic binding protein [Propionibacterium acnes HL005PA1]
gi|315097045|gb|EFT69021.1| periplasmic binding protein [Propionibacterium acnes HL038PA1]
gi|327332616|gb|EGE74351.1| periplasmic-binding protein of ABC transporter [Propionibacterium
acnes HL096PA2]
gi|327446604|gb|EGE93258.1| periplasmic binding protein [Propionibacterium acnes HL043PA2]
gi|327448953|gb|EGE95607.1| periplasmic binding protein [Propionibacterium acnes HL043PA1]
gi|328759700|gb|EGF73297.1| periplasmic-binding protein of ABC transporter [Propionibacterium
acnes HL099PA1]
gi|353558172|gb|EHC27538.1| hypothetical protein HMPREF1003_00574 [Propionibacterium sp.
5_U_42AFAA]
gi|407903059|gb|AFU39889.1| periplasmic binding protein [Propionibacterium acnes C1]
Length = 414
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 93/348 (26%), Positives = 142/348 (40%), Gaps = 44/348 (12%)
Query: 10 DAQNFHIYYGQTFKVI------KNAIDGRSYLLIQNNSRMAARTKYCTARIKSFVIPMSN 63
DA++ + Y +++K++ A Y+L+Q + A+ + IP +
Sbjct: 64 DARDITVSYHKSYKIVTLKHPSNTATKPVQYVLVQCGA-PDPHLDGELAKAQRITIPTTK 122
Query: 64 YSVDTDFFPGK--LLGLLSSMKGM----------TSESVASGCVLKLYQGGEIGLVN--K 109
++ + P K +LG L S+ GM T +++ V G +N K
Sbjct: 123 VALGSTTLPMKFQMLGKLDSVAGMVNVDRVGNPDTRQALKDHKVASFAAGDNATEINTEK 182
Query: 110 SEPLQFSQYAAHFTTDSDQPQACN--------FANFAPFGEDGPLRRAEWIKFLGIFANA 161
L+ + + + SD + F E PL RAEWIK+ +F NA
Sbjct: 183 LAALRPDLFIFNLVSGSDNTSKIDKIKEIGIPVVAEPNFLESTPLGRAEWIKYDSLFVNA 242
Query: 162 EARANQVYNAVKENYLCLT-RVAAGKTKPFKPIVAWMEFYNGVWSFT-KEAFKLKYVEDA 219
E ANQ Y+ + E Y R A KT +P V Y GVW E + ++++ DA
Sbjct: 243 EKTANQKYDEIAEKYHATAKRTAKVKT---RPTVLHGSQYKGVWYIKPNENYAIQFLRDA 299
Query: 220 GGENVDSSINKMTYNISNSDDLEQLHAILCTVDVVIDGTYTLEPANYTQSTFLENIDAAD 279
GGE V ++ + S D E + D IDG P + L+ D
Sbjct: 300 GGEYVFKDLHGVA---SRKLDTEAVIKQAHDADFWIDG-----PEKSSIPQILK-ADPRL 350
Query: 280 KSCFAFLTNQSLWRFDKRNQNSLALDWFDGAVSQPQLVLADLTEALFP 327
KS A L N ++W R D++ V +P LVLADLT L P
Sbjct: 351 KSLKA-LDNGNVWDATLRADPKHGNDYWQTGVVRPDLVLADLTAILHP 397
>gi|422536222|ref|ZP_16612130.1| periplasmic binding protein [Propionibacterium acnes HL078PA1]
gi|315081623|gb|EFT53599.1| periplasmic binding protein [Propionibacterium acnes HL078PA1]
Length = 414
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 95/348 (27%), Positives = 145/348 (41%), Gaps = 44/348 (12%)
Query: 10 DAQNFHIYYGQTFKVI------KNAIDGRSYLLIQNNSRMAARTKYCTARIKSFVIPMSN 63
DA++ + Y +++K++ A Y+L+Q + A+ + IP +
Sbjct: 64 DARDITVSYHKSYKIVTLKHPSNTATKPVQYVLVQCGA-PDPHLDGELAKAQRITIPTTK 122
Query: 64 YSVDTDFFPGK--LLGLLSSMKGM----------TSESVASGCVLKLYQGGEIGLVN--K 109
++ + P K +LG L S+ GM T +++ V G +N K
Sbjct: 123 VALGSTTLPMKFQMLGKLDSVAGMVNVDRVGNPDTRQALKDHKVASFAAGDNATEINTEK 182
Query: 110 SEPLQFSQY------AAHFTTDSDQPQACNFANFAP--FGEDGPLRRAEWIKFLGIFANA 161
L+ + A+ T+ D+ + A F E PL RAEWIK+ +F NA
Sbjct: 183 LAALRPDLFIFNLVSASDNTSKIDKIKEMGIPVVAEPNFLESTPLGRAEWIKYDSLFVNA 242
Query: 162 EARANQVYNAVKENYLCLT-RVAAGKTKPFKPIVAWMEFYNGVWSFT-KEAFKLKYVEDA 219
E ANQ Y+ + E Y R A KT +P V Y GVW E + ++++ DA
Sbjct: 243 EKTANQKYDEIAEKYHATAKRTAKVKT---RPTVLHGSQYKGVWYIKPNENYAIQFLRDA 299
Query: 220 GGENVDSSINKMTYNISNSDDLEQLHAILCTVDVVIDGTYTLEPANYTQSTFLENIDAAD 279
GGE V ++ + S D E + D IDG P + L+ D
Sbjct: 300 GGEYVFKDLHGVA---SRKLDTEAVIKQAHDADFWIDG-----PEKSSIPQILK-ADPRL 350
Query: 280 KSCFAFLTNQSLWRFDKRNQNSLALDWFDGAVSQPQLVLADLTEALFP 327
KS A L N ++W R D++ V +P LVLADLT L P
Sbjct: 351 KSLKA-LDNGNVWDATLRADPKHGNDYWQTGVVRPDLVLADLTAILHP 397
>gi|365961833|ref|YP_004943399.1| periplasmic-binding protein of ABC transporter [Propionibacterium
acnes TypeIA2 P.acn31]
gi|365964077|ref|YP_004945642.1| periplasmic-binding protein of ABC transporter [Propionibacterium
acnes TypeIA2 P.acn17]
gi|365973021|ref|YP_004954580.1| periplasmic-binding protein of ABC transporter [Propionibacterium
acnes TypeIA2 P.acn33]
gi|422426847|ref|ZP_16503765.1| periplasmic binding protein [Propionibacterium acnes HL087PA1]
gi|422432243|ref|ZP_16509113.1| periplasmic binding protein [Propionibacterium acnes HL059PA2]
gi|422434731|ref|ZP_16511589.1| periplasmic binding protein [Propionibacterium acnes HL083PA2]
gi|422442457|ref|ZP_16519260.1| periplasmic binding protein [Propionibacterium acnes HL002PA1]
gi|422446243|ref|ZP_16522988.1| periplasmic binding protein [Propionibacterium acnes HL027PA1]
gi|422450417|ref|ZP_16527134.1| periplasmic binding protein [Propionibacterium acnes HL030PA2]
gi|422452889|ref|ZP_16529585.1| periplasmic binding protein [Propionibacterium acnes HL087PA3]
gi|422500041|ref|ZP_16576297.1| periplasmic binding protein [Propionibacterium acnes HL063PA2]
gi|422511175|ref|ZP_16587318.1| periplasmic binding protein [Propionibacterium acnes HL059PA1]
gi|422538702|ref|ZP_16614576.1| periplasmic binding protein [Propionibacterium acnes HL013PA1]
gi|422541489|ref|ZP_16617347.1| periplasmic binding protein [Propionibacterium acnes HL037PA1]
gi|422546155|ref|ZP_16621982.1| periplasmic binding protein [Propionibacterium acnes HL050PA3]
gi|422550574|ref|ZP_16626371.1| periplasmic binding protein [Propionibacterium acnes HL050PA1]
gi|422556923|ref|ZP_16632670.1| periplasmic binding protein [Propionibacterium acnes HL025PA2]
gi|422570866|ref|ZP_16646461.1| periplasmic binding protein [Propionibacterium acnes HL067PA1]
gi|313764903|gb|EFS36267.1| periplasmic binding protein [Propionibacterium acnes HL013PA1]
gi|313815535|gb|EFS53249.1| periplasmic binding protein [Propionibacterium acnes HL059PA1]
gi|313828874|gb|EFS66588.1| periplasmic binding protein [Propionibacterium acnes HL063PA2]
gi|314917330|gb|EFS81161.1| periplasmic binding protein [Propionibacterium acnes HL050PA1]
gi|314921934|gb|EFS85765.1| periplasmic binding protein [Propionibacterium acnes HL050PA3]
gi|314930801|gb|EFS94632.1| periplasmic binding protein [Propionibacterium acnes HL067PA1]
gi|314955273|gb|EFS99678.1| periplasmic binding protein [Propionibacterium acnes HL027PA1]
gi|314959275|gb|EFT03377.1| periplasmic binding protein [Propionibacterium acnes HL002PA1]
gi|314969273|gb|EFT13371.1| periplasmic binding protein [Propionibacterium acnes HL037PA1]
gi|315099652|gb|EFT71628.1| periplasmic binding protein [Propionibacterium acnes HL059PA2]
gi|315110013|gb|EFT81989.1| periplasmic binding protein [Propionibacterium acnes HL030PA2]
gi|327454367|gb|EGF01022.1| periplasmic binding protein [Propionibacterium acnes HL087PA3]
gi|327456433|gb|EGF03088.1| periplasmic binding protein [Propionibacterium acnes HL083PA2]
gi|328756126|gb|EGF69742.1| periplasmic binding protein [Propionibacterium acnes HL087PA1]
gi|328758505|gb|EGF72121.1| periplasmic binding protein [Propionibacterium acnes HL025PA2]
gi|365738514|gb|AEW82716.1| periplasmic-binding protein of ABC transporter [Propionibacterium
acnes TypeIA2 P.acn31]
gi|365740758|gb|AEW80452.1| periplasmic-binding protein of ABC transporter [Propionibacterium
acnes TypeIA2 P.acn17]
gi|365743020|gb|AEW78217.1| periplasmic-binding protein of ABC transporter [Propionibacterium
acnes TypeIA2 P.acn33]
Length = 414
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 94/357 (26%), Positives = 146/357 (40%), Gaps = 50/357 (14%)
Query: 4 DISKVEDAQNFHIYYGQTFKVI------KNAIDGRSYLLIQ---NNSRMAARTKYCTARI 54
D + + DA++ + Y +++KV+ A Y+L+Q + + A+
Sbjct: 58 DKATLGDARDITVSYHKSYKVVTLKHPSNTATKPVQYVLVQCGVPDPHLDGEL----AKA 113
Query: 55 KSFVIPMSNYSVDTDFFPGK--LLGLLSSMKGM----------TSESVASGCVLKLYQGG 102
+ IP + ++ + P K +LG L S+ GM T +++ V G
Sbjct: 114 QRITIPTTKVALGSTTLPMKFQMLGKLDSVAGMVNVDRVGNPDTRQALKDHKVASFAAGD 173
Query: 103 EIGLVN--KSEPLQFSQYAAHFTTDSDQPQACN--------FANFAPFGEDGPLRRAEWI 152
+N K L+ + + + SD + F E PL RAEWI
Sbjct: 174 NATEINTEKLAALRPDLFIFNLVSGSDNTSKIDKIKEMGIPVVAEPNFLESTPLGRAEWI 233
Query: 153 KFLGIFANAEARANQVYNAVKENYLCLT-RVAAGKTKPFKPIVAWMEFYNGVWSFT-KEA 210
K+ +F NAE ANQ Y+ + E Y R A KT +P V Y GVW E
Sbjct: 234 KYDSLFVNAEKTANQKYDEIAEKYHATAKRTAKVKT---RPTVLHGSQYKGVWYIKPNEN 290
Query: 211 FKLKYVEDAGGENVDSSINKMTYNISNSDDLEQLHAILCTVDVVIDGTYTLEPANYTQST 270
+ ++++ DAGGE V ++ + S D E + D IDG P +
Sbjct: 291 YAIQFLRDAGGEYVFKDLHGVA---SRKLDTEAVIKQAHDADFWIDG-----PEKSSIPQ 342
Query: 271 FLENIDAADKSCFAFLTNQSLWRFDKRNQNSLALDWFDGAVSQPQLVLADLTEALFP 327
L+ D KS A L N ++W R D++ V +P LVLA+LT L P
Sbjct: 343 ILK-ADPRLKSLKA-LDNGNMWDATPRADPKHGNDYWQTGVVRPDLVLANLTAILHP 397
>gi|50841597|ref|YP_054824.1| ABC transporter substrate-binding protein [Propionibacterium acnes
KPA171202]
gi|282853153|ref|ZP_06262490.1| periplasmic binding protein [Propionibacterium acnes J139]
gi|335054936|ref|ZP_08547732.1| ABC transporter, substrate-binding protein [Propionibacterium sp.
434-HC2]
gi|387502473|ref|YP_005943702.1| periplasmic-binding protein of ABC transporter [Propionibacterium
acnes 6609]
gi|422389531|ref|ZP_16469628.1| periplasmic-binding protein of ABC transporter [Propionibacterium
acnes HL103PA1]
gi|422437018|ref|ZP_16513865.1| periplasmic binding protein [Propionibacterium acnes HL092PA1]
gi|422455377|ref|ZP_16532047.1| periplasmic binding protein [Propionibacterium acnes HL030PA1]
gi|422466698|ref|ZP_16543260.1| periplasmic binding protein [Propionibacterium acnes HL110PA4]
gi|422468428|ref|ZP_16544959.1| periplasmic binding protein [Propionibacterium acnes HL110PA3]
gi|422514693|ref|ZP_16590811.1| periplasmic binding protein [Propionibacterium acnes HL110PA2]
gi|422523369|ref|ZP_16599381.1| periplasmic binding protein [Propionibacterium acnes HL053PA2]
gi|422531686|ref|ZP_16607634.1| periplasmic binding protein [Propionibacterium acnes HL110PA1]
gi|422544033|ref|ZP_16619873.1| periplasmic binding protein [Propionibacterium acnes HL082PA1]
gi|422565871|ref|ZP_16641510.1| periplasmic binding protein [Propionibacterium acnes HL082PA2]
gi|50839199|gb|AAT81866.1| periplasmic-binding protein of ABC transporter [Propionibacterium
acnes KPA171202]
gi|282582606|gb|EFB87986.1| periplasmic binding protein [Propionibacterium acnes J139]
gi|313792789|gb|EFS40870.1| periplasmic binding protein [Propionibacterium acnes HL110PA1]
gi|313803452|gb|EFS44634.1| periplasmic binding protein [Propionibacterium acnes HL110PA2]
gi|314964162|gb|EFT08262.1| periplasmic binding protein [Propionibacterium acnes HL082PA1]
gi|314965513|gb|EFT09612.1| periplasmic binding protein [Propionibacterium acnes HL082PA2]
gi|314982671|gb|EFT26763.1| periplasmic binding protein [Propionibacterium acnes HL110PA3]
gi|315078932|gb|EFT50950.1| periplasmic binding protein [Propionibacterium acnes HL053PA2]
gi|315091330|gb|EFT63306.1| periplasmic binding protein [Propionibacterium acnes HL110PA4]
gi|315107605|gb|EFT79581.1| periplasmic binding protein [Propionibacterium acnes HL030PA1]
gi|327329058|gb|EGE70818.1| periplasmic-binding protein of ABC transporter [Propionibacterium
acnes HL103PA1]
gi|327457296|gb|EGF03951.1| periplasmic binding protein [Propionibacterium acnes HL092PA1]
gi|333763293|gb|EGL40753.1| ABC transporter, substrate-binding protein [Propionibacterium sp.
434-HC2]
gi|335276518|gb|AEH28423.1| periplasmic-binding protein of ABC transporter [Propionibacterium
acnes 6609]
Length = 414
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 93/348 (26%), Positives = 142/348 (40%), Gaps = 44/348 (12%)
Query: 10 DAQNFHIYYGQTFKVI------KNAIDGRSYLLIQNNSRMAARTKYCTARIKSFVIPMSN 63
DA++ + Y +++KV+ A Y+L+Q + A+ + IP +
Sbjct: 64 DARDITVSYHKSYKVVTLKHPSNTATKPVQYVLVQCGA-PDPHLDGELAKAQRITIPTTK 122
Query: 64 YSVDTDFFPGK--LLGLLSSMKGM----------TSESVASGCVLKLYQGGEIGLVN--K 109
++ + P K +LG L S+ GM T +++ V G +N K
Sbjct: 123 VALGSTTLPMKFQMLGKLDSVAGMVNVDRVGNPDTRQALKDHKVASFAAGDNATEINTEK 182
Query: 110 SEPLQFSQYAAHFTTDSDQPQACN--------FANFAPFGEDGPLRRAEWIKFLGIFANA 161
L+ + + + SD + F E PL RAEWIK+ +F NA
Sbjct: 183 LAALRPDLFIFNLVSGSDNTSKIDKIKEMGIPVVAEPNFLESTPLGRAEWIKYDSLFVNA 242
Query: 162 EARANQVYNAVKENYLCLT-RVAAGKTKPFKPIVAWMEFYNGVWSFT-KEAFKLKYVEDA 219
E ANQ Y+ + E Y R A KT +P V Y GVW E + ++++ DA
Sbjct: 243 EKTANQKYDEIAEKYHATAKRTAKVKT---RPTVLHGSQYKGVWYIKPNENYAIQFLRDA 299
Query: 220 GGENVDSSINKMTYNISNSDDLEQLHAILCTVDVVIDGTYTLEPANYTQSTFLENIDAAD 279
GGE V ++ + S D E + D IDG P + L+ D
Sbjct: 300 GGEYVFKDLHGVA---SRKLDTEAVIKQAHDADFWIDG-----PEKSSIPQILK-ADPRL 350
Query: 280 KSCFAFLTNQSLWRFDKRNQNSLALDWFDGAVSQPQLVLADLTEALFP 327
KS A L N ++W R D++ V +P LVLA+LT L P
Sbjct: 351 KSLKA-LDNGNMWDATPRADPKHGNDYWQTGVVRPDLVLANLTAILHP 397
>gi|422577895|ref|ZP_16653424.1| periplasmic binding protein [Propionibacterium acnes HL005PA4]
gi|314916332|gb|EFS80163.1| periplasmic binding protein [Propionibacterium acnes HL005PA4]
Length = 414
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 94/357 (26%), Positives = 146/357 (40%), Gaps = 50/357 (14%)
Query: 4 DISKVEDAQNFHIYYGQTFKVI------KNAIDGRSYLLIQ---NNSRMAARTKYCTARI 54
D + + DA++ + Y +++KV+ A Y+L+Q + + A+
Sbjct: 58 DKATLGDARDITVSYHKSYKVVTLKHPSNTATKPVQYVLVQCGVPDPHLDGEL----AKA 113
Query: 55 KSFVIPMSNYSVDTDFFPGK--LLGLLSSMKGM----------TSESVASGCVLKLYQGG 102
+ IP + ++ + P K +LG L S+ GM T +++ V G
Sbjct: 114 QRITIPTTKVALGSTTLPMKFQMLGKLDSVAGMVNVDRVGNPDTRQALKDHKVASFAAGD 173
Query: 103 EIGLVN--KSEPLQFSQYAAHFTTDSDQPQACN--------FANFAPFGEDGPLRRAEWI 152
+N K L+ + + + SD + F E PL RAEWI
Sbjct: 174 NATEINTEKLAALRPDLFIFNLVSGSDNTSKIDKIKEMGIPVVAEPNFLESTPLGRAEWI 233
Query: 153 KFLGIFANAEARANQVYNAVKENYLCLT-RVAAGKTKPFKPIVAWMEFYNGVWSFT-KEA 210
K+ +F NAE ANQ Y+ + E Y R A KT +P V Y GVW E
Sbjct: 234 KYDSLFVNAEKTANQKYDEIAEKYHATAKRTAKVKT---RPTVLHGSQYKGVWYIKPNEN 290
Query: 211 FKLKYVEDAGGENVDSSINKMTYNISNSDDLEQLHAILCTVDVVIDGTYTLEPANYTQST 270
+ ++++ DAGGE V ++ + S D E + D IDG P +
Sbjct: 291 YAIQFLRDAGGEYVFKDLHGVA---SRKLDTEAVIKQAQDADFWIDG-----PEKSSIPQ 342
Query: 271 FLENIDAADKSCFAFLTNQSLWRFDKRNQNSLALDWFDGAVSQPQLVLADLTEALFP 327
L+ D KS A L N ++W R D++ V +P LVLA+LT L P
Sbjct: 343 ILK-ADPRLKSLKA-LDNGNMWDATPRADPKHGNDYWQTGVVRPDLVLANLTAILHP 397
>gi|417933463|ref|ZP_12576788.1| periplasmic-binding protein [Propionibacterium acnes SK182B-JCVI]
gi|340772026|gb|EGR94540.1| periplasmic-binding protein [Propionibacterium acnes SK182B-JCVI]
Length = 407
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 93/367 (25%), Positives = 159/367 (43%), Gaps = 59/367 (16%)
Query: 10 DAQNFHIYYGQTFKVI------KNAIDGRSYLLIQNNSRMAARTKYCTARIKSFVIPMSN 63
DA+ + Y +++KV+ + +Y+L+Q + + T A + IP +
Sbjct: 56 DARGITVSYHKSYKVVTIKHPSNTSPRKATYVLVQCGAPKPSLTGDL-ATAQRISIPTTR 114
Query: 64 YSVDTDFFPGK--LLGLLSSMKGM----------TSESVASGCVLKLYQGGEIGLVNKSE 111
++ + P K ++ L ++ GM T E++ + V G +N +E
Sbjct: 115 VALGSTTEPLKFQMMNKLDTVAGMANVDRVGDPKTREALKAHKVADFAAGDGTTEIN-TE 173
Query: 112 PLQFSQYAAHFTTDSDQPQACNFANFAPFG----------EDGPLRRAEWIKFLGIFANA 161
L + + D P FA G E+ PL RAEWIK+ +F NA
Sbjct: 174 KLALLRSDLFIVSGHDDP--SKFAKVKEMGTPVVAEPDFLENTPLGRAEWIKYDSLFVNA 231
Query: 162 EARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEFYNGVWSFTK-EAFKLKYVEDAG 220
E ANQ Y+ + + Y + A T P P V + + G W E + ++++ DAG
Sbjct: 232 ERVANQKYDEIAKKYHQTVQHTATVTTP--PSVLYGYQFKGTWYIKPDENYSIQFLRDAG 289
Query: 221 GENVDSSINKM-TYNISNSDDLEQLHAILCTVDVVIDGTYTLEPANYTQSTFLENIDAAD 279
GE V ++ + + ++ L++ H D IDG N + + + +I AD
Sbjct: 290 GEYVFKDVHGVASSKMTTETILKKAH----DADFWIDGQI-----NEPEKSSIPDIIRAD 340
Query: 280 ---KSCFAFLTNQSLW----RFDKRNQNSLALDWFDGAVSQPQLVLADLTEALFP--TGN 330
K+ A T ++W R D R+ N D++ V +P LVLADL+ L P + N
Sbjct: 341 PRMKTLKAMHTG-NVWDATLRADPRHGN----DYWQTGVVRPDLVLADLSAILHPELSTN 395
Query: 331 YTITYFR 337
+ T++R
Sbjct: 396 HQFTFYR 402
>gi|422551533|ref|ZP_16627326.1| periplasmic binding protein [Propionibacterium acnes HL005PA3]
gi|422555023|ref|ZP_16630793.1| periplasmic binding protein [Propionibacterium acnes HL005PA2]
gi|314986991|gb|EFT31083.1| periplasmic binding protein [Propionibacterium acnes HL005PA2]
gi|314990514|gb|EFT34605.1| periplasmic binding protein [Propionibacterium acnes HL005PA3]
Length = 414
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 93/348 (26%), Positives = 141/348 (40%), Gaps = 44/348 (12%)
Query: 10 DAQNFHIYYGQTFKVI------KNAIDGRSYLLIQNNSRMAARTKYCTARIKSFVIPMSN 63
DA++ + Y +++K++ A Y+L+Q + A+ + IP +
Sbjct: 64 DARDITVSYHKSYKIVTLKHPSNTATKPVQYVLVQCGA-PDPHLDGELAKAQRITIPTTK 122
Query: 64 YSVDTDFFPGK--LLGLLSSMKGM----------TSESVASGCVLKLYQGGEIGLVN--K 109
+ + P K +LG L S+ GM T +++ V G +N K
Sbjct: 123 VASGSTTLPMKFQMLGKLDSVAGMVNVDRVGNPDTRQALKDHKVASFAAGDNATEINTEK 182
Query: 110 SEPLQFSQYAAHFTTDSDQPQACN--------FANFAPFGEDGPLRRAEWIKFLGIFANA 161
L+ + + + SD + F E PL RAEWIK+ +F NA
Sbjct: 183 LAALRPDLFIFNLVSGSDNTSKIDKIKEMGIPVVAEPNFLESTPLGRAEWIKYDSLFVNA 242
Query: 162 EARANQVYNAVKENYLCLT-RVAAGKTKPFKPIVAWMEFYNGVWSFT-KEAFKLKYVEDA 219
E ANQ Y+ + E Y R A KT +P V Y GVW E + ++++ DA
Sbjct: 243 EKTANQKYDEIAEKYHATAKRTAKVKT---RPTVLHGSQYKGVWYIKPNENYAIQFLRDA 299
Query: 220 GGENVDSSINKMTYNISNSDDLEQLHAILCTVDVVIDGTYTLEPANYTQSTFLENIDAAD 279
GGE V ++ + S D E + D IDG P + L+ D
Sbjct: 300 GGEYVFKDLHGVA---SRKLDTEAVIKQAHDADFWIDG-----PEKSSIPQILK-ADPRL 350
Query: 280 KSCFAFLTNQSLWRFDKRNQNSLALDWFDGAVSQPQLVLADLTEALFP 327
KS A L N ++W R D++ V +P LVLADLT L P
Sbjct: 351 KSLKA-LDNGNVWDATLRADPKHGNDYWQTGVVRPDLVLADLTAILHP 397
>gi|422463555|ref|ZP_16540168.1| periplasmic binding protein [Propionibacterium acnes HL060PA1]
gi|315094564|gb|EFT66540.1| periplasmic binding protein [Propionibacterium acnes HL060PA1]
Length = 414
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 92/348 (26%), Positives = 141/348 (40%), Gaps = 44/348 (12%)
Query: 10 DAQNFHIYYGQTFKVI------KNAIDGRSYLLIQNNSRMAARTKYCTARIKSFVIPMSN 63
DA++ + Y +++KV+ A Y+L+Q + A+ + IP +
Sbjct: 64 DARDITVSYHKSYKVVTLKHPSNTATKPVQYVLVQCGA-PDPHLDGELAKAQRITIPTTK 122
Query: 64 YSVDTDFFPGK--LLGLLSSMKGM----------TSESVASGCVLKLYQGGEIGLVN--K 109
++ + P K +LG L S+ GM T +++ V G +N K
Sbjct: 123 VALGSTTLPMKFQMLGKLDSVAGMVNVDRVGNPDTRQALKDHKVASFAAGDNATEINTEK 182
Query: 110 SEPLQFSQYAAHFTTDSDQPQACN--------FANFAPFGEDGPLRRAEWIKFLGIFANA 161
L+ + + + SD + F E PL RAEWIK+ +F N
Sbjct: 183 LAALRPDLFIFNLVSGSDNTSKIDKIKEMGIPVVAEPNFLESTPLGRAEWIKYDSLFVNV 242
Query: 162 EARANQVYNAVKENYLCLT-RVAAGKTKPFKPIVAWMEFYNGVWSFT-KEAFKLKYVEDA 219
E ANQ Y+ + E Y R A KT +P V Y GVW E + ++++ DA
Sbjct: 243 EKTANQKYDEIAEKYHATAKRTAKVKT---RPTVLHGSQYKGVWYIKPNENYAIQFLRDA 299
Query: 220 GGENVDSSINKMTYNISNSDDLEQLHAILCTVDVVIDGTYTLEPANYTQSTFLENIDAAD 279
GGE V ++ + S D E + D IDG P + L+ D
Sbjct: 300 GGEYVFKDLHGVA---SRKLDTEAVIKQAHDADFWIDG-----PEKSSIPQILK-ADPRL 350
Query: 280 KSCFAFLTNQSLWRFDKRNQNSLALDWFDGAVSQPQLVLADLTEALFP 327
KS A L N ++W R D++ V +P LVLA+LT L P
Sbjct: 351 KSLKA-LDNGNMWDATPRADPKHGNDYWQTGVVRPDLVLANLTAILHP 397
>gi|422503832|ref|ZP_16580069.1| periplasmic binding protein, partial [Propionibacterium acnes
HL027PA2]
gi|315082984|gb|EFT54960.1| periplasmic binding protein [Propionibacterium acnes HL027PA2]
Length = 308
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 66/190 (34%), Positives = 87/190 (45%), Gaps = 15/190 (7%)
Query: 140 FGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLT-RVAAGKTKPFKPIVAWME 198
F E PL RAEWIK+ +F NAE ANQ Y+ + E Y R A KT +P V
Sbjct: 115 FLESTPLGRAEWIKYDSLFVNAEKTANQKYDEIAEKYHATAKRTAKVKT---RPTVLHGS 171
Query: 199 FYNGVWSFT-KEAFKLKYVEDAGGENVDSSINKMTYNISNSDDLEQLHAILCTVDVVIDG 257
Y GVW E + ++++ DAGGE V ++ + S D E + D IDG
Sbjct: 172 QYKGVWYIKPNENYAIQFLRDAGGEYVFKDLHGVA---SRKLDTEAVIKQAHDADFWIDG 228
Query: 258 TYTLEPANYTQSTFLENIDAADKSCFAFLTNQSLWRFDKRNQNSLALDWFDGAVSQPQLV 317
P + L+ D KS A L N ++W R D++ V +P LV
Sbjct: 229 -----PEKSSIPQILK-ADPRLKSLKA-LDNGNVWDATLRADPKHGNDYWQTGVVRPDLV 281
Query: 318 LADLTEALFP 327
LADLT L P
Sbjct: 282 LADLTAILHP 291
>gi|422457884|ref|ZP_16534542.1| periplasmic binding protein [Propionibacterium acnes HL050PA2]
gi|315104984|gb|EFT76960.1| periplasmic binding protein [Propionibacterium acnes HL050PA2]
Length = 414
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 92/348 (26%), Positives = 141/348 (40%), Gaps = 44/348 (12%)
Query: 10 DAQNFHIYYGQTFKVI------KNAIDGRSYLLIQNNSRMAARTKYCTARIKSFVIPMSN 63
DA++ + Y +++KV+ A Y+L+Q + A+ + IP +
Sbjct: 64 DARDITVSYHKSYKVVTLKHPSNTATKPVQYVLVQCGA-PDPHLDGELAKAQRITIPTTK 122
Query: 64 YSVDTDFFPGK--LLGLLSSMKGM----------TSESVASGCVLKLYQGGEIGLVN--K 109
++ + P K +LG L S+ GM T +++ V G +N K
Sbjct: 123 VALGSTTLPMKFQMLGKLDSVAGMVNVDRVGNPDTRQALKDHKVASFAAGDNATEINTEK 182
Query: 110 SEPLQFSQYAAHFTTDSDQPQACN--------FANFAPFGEDGPLRRAEWIKFLGIFANA 161
L+ + + + SD + F E PL RAEWIK+ +F NA
Sbjct: 183 LAALRPDLFIFNLVSGSDNTSKIDKIKEMGIPVVAEPNFLESTPLGRAEWIKYDSLFVNA 242
Query: 162 EARANQVYNAVKENYLCLT-RVAAGKTKPFKPIVAWMEFYNGVWSFT-KEAFKLKYVEDA 219
E ANQ Y+ + E Y R A KT +P V Y G W E + ++++ DA
Sbjct: 243 EKTANQKYDEIAEKYHATAKRTAKVKT---RPTVLHGSQYKGAWYIKPNENYAIQFLRDA 299
Query: 220 GGENVDSSINKMTYNISNSDDLEQLHAILCTVDVVIDGTYTLEPANYTQSTFLENIDAAD 279
GGE V ++ + S D E + D IDG P + L+ D
Sbjct: 300 GGEYVFKDLHGVA---SRKLDTEAVIKQAHDADFWIDG-----PEKSSIPQILK-ADPRL 350
Query: 280 KSCFAFLTNQSLWRFDKRNQNSLALDWFDGAVSQPQLVLADLTEALFP 327
KS A L N ++W R D++ V +P LVLA+LT L P
Sbjct: 351 KSLKA-LDNGNMWDATPRADPKHGNDYWQTGVVRPDLVLANLTAILHP 397
>gi|422576654|ref|ZP_16652191.1| periplasmic binding protein [Propionibacterium acnes HL001PA1]
gi|314922612|gb|EFS86443.1| periplasmic binding protein [Propionibacterium acnes HL001PA1]
Length = 414
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 92/348 (26%), Positives = 142/348 (40%), Gaps = 44/348 (12%)
Query: 10 DAQNFHIYYGQTFKVI------KNAIDGRSYLLIQNNSRMAARTKYCTARIKSFVIPMSN 63
DA++ + Y +++KV+ A Y+L+Q + A+ + IP +
Sbjct: 64 DARDITVSYHKSYKVVTLKHPSNTATKPVQYVLVQCGA-PDPHLDGELAKAQRITIPTTK 122
Query: 64 YSVDTDFFPGK--LLGLLSSMKGMTSESVASGC----VLKLYQGGEIGLVNKSEPLQFSQ 117
++ + P K +LG L S+ GM + LK ++ N + + +
Sbjct: 123 VALGSTTLPMKFQMLGKLDSVAGMVNVDRVGNPDTRQALKDHKVASFATDNTATEINTEK 182
Query: 118 YAA--------------HFTTDSDQPQACNFANFAP--FGEDGPLRRAEWIKFLGIFANA 161
AA T+ D+ + A F E PL RAEWIK+ +F +A
Sbjct: 183 LAALRPDLFIFNLVSGSDNTSKIDKIKEMGIPVVAEPNFLESTPLGRAEWIKYDSLFVSA 242
Query: 162 EARANQVYNAVKENYLCLT-RVAAGKTKPFKPIVAWMEFYNGVWSFT-KEAFKLKYVEDA 219
E ANQ Y+ + E Y R A KT +P V Y GVW E + ++++ DA
Sbjct: 243 EKTANQKYDEIAEKYHATAKRTAKVKT---RPTVLHGSQYKGVWYIKPNENYAIQFLRDA 299
Query: 220 GGENVDSSINKMTYNISNSDDLEQLHAILCTVDVVIDGTYTLEPANYTQSTFLENIDAAD 279
GGE V ++ + S D E + D IDG P + L+ D
Sbjct: 300 GGEYVFKDLHGVA---SRKLDTEAVIKQAHDADFWIDG-----PEKSSIPQILK-ADPRL 350
Query: 280 KSCFAFLTNQSLWRFDKRNQNSLALDWFDGAVSQPQLVLADLTEALFP 327
KS A L N ++W R D++ V +P LVLA+LT L P
Sbjct: 351 KSLKA-LDNGNMWDATPRADPKHGNDYWQTGVVRPDLVLANLTAILHP 397
>gi|434386289|ref|YP_007096900.1| ABC-type Fe3+-hydroxamate transport system, periplasmic component
[Chamaesiphon minutus PCC 6605]
gi|428017279|gb|AFY93373.1| ABC-type Fe3+-hydroxamate transport system, periplasmic component
[Chamaesiphon minutus PCC 6605]
Length = 432
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 84/365 (23%), Positives = 155/365 (42%), Gaps = 56/365 (15%)
Query: 7 KVEDAQNFHIYYGQTFKVI------KNAIDGRSYLLIQNNSRMAA---RTKYCTARIKSF 57
KV A+ F + Y + +KV+ +NA Y+L+Q N+ + + +++ + S
Sbjct: 87 KVTQAKGFTVEYHRNYKVVSVKNPWRNADTTFQYVLVQCNTPIPSGFDKSQIVQVPVNSV 146
Query: 58 VIPMSNYSVDTDFFPG-KLLGLLSSMKGMTS-ESVASGCVLKLYQGGEIGLVNKS----- 110
V S+ T P LGL+ + G++ V + V+ + G++ V +S
Sbjct: 147 V------SMSTTHLPLLDKLGLVDRLIGVSDFNQVNTPSVVAKIKTGKLQEVGRSNNTNV 200
Query: 111 ------EPLQFSQYAAHFTTDSDQPQ----ACNFANFAPFGEDGPLRRAEWIKFLGIFAN 160
+P + Y P+ A A + E PL +AEW+KF+ +F N
Sbjct: 201 EKVLEIKPELVTTYGVGNPKSDSHPKLIEAGLPVAIIAEYMESSPLGKAEWLKFMALFFN 260
Query: 161 AEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEFYNGVWSFT-KEAFKLKYVEDA 219
E A QV++ ++ Y + ++A+ KP V G W +++ K++ DA
Sbjct: 261 RETEAEQVFSQMESRYNSIAKIASQAKN--KPTVFSGFDSRGTWYIPGGDSYSAKFIADA 318
Query: 220 GGENV---DSSINKMTYNISNSDDLEQLHAILCTVDVVIDGTYTLEPANYTQSTFLENID 276
GG + D S + + D Q T +V I+ + ++++
Sbjct: 319 GGNYIWKEDRSTGSLKLSFEQVLDRAQ------TAEVWINSSQAWRS--------VDDVI 364
Query: 277 AADK--SCFAFLTNQSLWRFDKRNQNSLALDWFDGAVSQPQLVLADLTEALFPT--GNYT 332
+D+ + F+ + N L+ R + D+++G + P LVLADL +AL P +
Sbjct: 365 NSDRRYAKFSAVKNAKLFNPTARMNPTGGNDFWEGGTANPDLVLADLVKALHPELLPKHQ 424
Query: 333 ITYFR 337
Y+R
Sbjct: 425 FVYYR 429
>gi|428301765|ref|YP_007140071.1| periplasmic binding protein [Calothrix sp. PCC 6303]
gi|428238309|gb|AFZ04099.1| periplasmic binding protein [Calothrix sp. PCC 6303]
Length = 409
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 87/368 (23%), Positives = 152/368 (41%), Gaps = 48/368 (13%)
Query: 4 DISKVEDAQNFHIYYGQTFKVI------KNAIDGRSYLLIQNNSRMAARTKYCTARIKSF 57
D + AQ F + Y + +KVI K+A G Y+L+Q + +
Sbjct: 57 DKVTITRAQGFTVEYHKNYKVITINNPWKDAKTGFKYVLVQCGTPTPKDILENNKNAQVI 116
Query: 58 VIPM-SNYSVDTDFFPG--------KLLGLLSSMKGMTSE---SVASGCVLKLYQGGEIG 105
+P+ S S+ T P KLLG+ + TSE + +G + + +
Sbjct: 117 TVPVNSVVSLSTTHLPHLAKLGVVDKLLGVSDTKTVNTSEVVEKIKTGIIANVGNNASVN 176
Query: 106 LVNKSE--PLQFSQYAAHFTTDSDQPQ----ACNFANFAPFGEDGPLRRAEWIKFLGIFA 159
+ E P + Y T P+ A A A + ED PL R+EW+KF +F
Sbjct: 177 IEKILELNPELITTYGTGNTQIDSYPKLLEAALKVAINAEYMEDSPLGRSEWLKFTALFF 236
Query: 160 NAEARANQVYNAVKENYLCL-TRVAAGKTKPFKPIVAWMEF-YNGVWSFT-KEAFKLKYV 216
N E A Q++ V++ Y + T+ A K++P ++ F + G W ++ KY+
Sbjct: 237 NKEKEAEQIFGEVEQKYQQIATKAKAAKSRP----SVFVGFNFKGTWYMPGGNSYTAKYL 292
Query: 217 EDAGGENVDSSINKMTYNISNSDDLEQLHAILCTVDVVIDGTYTL---EPANYTQSTFLE 273
EDAG N + N +S L + ++ + + L + N Q E
Sbjct: 293 EDAGA-------NYLWSNEESSGSLPL--SFEAIIERATNADFWLNLSQKWNLKQDILAE 343
Query: 274 NIDAADKSCFAFLTNQSLWRFDKRNQNSLALDWFDGAVSQPQLVLADLTEALFPT--GNY 331
+ AD F + N +++ + R D+++G +S P VL+DL + P +
Sbjct: 344 DNRYAD---FKAVKNGNIYNNNLRINKGGGNDYWEGGISNPDAVLSDLIKIFHPEILPQH 400
Query: 332 TITYFRNI 339
+ ++R +
Sbjct: 401 ELVFYRRV 408
>gi|323453594|gb|EGB09465.1| hypothetical protein AURANDRAFT_63075 [Aureococcus anophagefferens]
Length = 510
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 93/383 (24%), Positives = 162/383 (42%), Gaps = 57/383 (14%)
Query: 14 FHIYYGQTFKVIKNAIDGRSYLLIQNNSRM-AARTKYCTARIKSFV-IPMSNY-SVDTDF 70
+ + Y +K+++N+ G ++L Q AA A +FV +P+SN + T +
Sbjct: 77 WEVSYHGHYKILQNSNSGEVHVLHQCGVDAPAAEDLPDYAADATFVQVPVSNVATTSTTY 136
Query: 71 FP-GKLLGLLSSMK--GMTSESVASGCVLKLYQGGEIGLVNKSEPLQFS----QYAAHFT 123
P +++G +++K G + + V+S C+ K+++ G + S S Q A
Sbjct: 137 IPFIEMIGERAALKAYGSSFDYVSSPCLRKMHRDGAVVSAYDSSTWSVSDEVLQDANVEV 196
Query: 124 TDSDQPQACNFANFA--PFGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTR 181
T +D +A + ED L+ AE+++ +G+F N EA A + NY+C T
Sbjct: 197 TIADSWSNSAYAAYTMTDIAEDSVLKVAEYVEVVGLFFNREAEATAAIETMIANYVCATD 256
Query: 182 VAAGKTKPF-----KPIVAWMEFY------NGVWSFTKE-AFKLKYVEDAGGENVDSSIN 229
AA KP V W +Y +G W+ + + +E AGGE
Sbjct: 257 SAAAYLAELGGDAAKPKVCWTSYYAYASDASGGWTMAASPVWYSELIEAAGGE------- 309
Query: 230 KMTYNISNSDDLEQLHAILCTVDVVI----DGTYTLEPANYTQS----TFLENIDAADKS 281
+ Y+ + D + + D V+ D + P +T+S T L+ + A
Sbjct: 310 LLMYD-GDGDVVSSWGTAYMSTDQVLELCADADVIISPDVWTKSAEPFTLLDGLPA---- 364
Query: 282 CFAFLTNQSLWRFDKRNQNSLALDWFDGAVSQPQLVLADLTEALFPT----GNYTITYFR 337
+ N + FD + A DWF+ V +P VL D+ AL+P G+ + R
Sbjct: 365 ----VVNGRV--FDNQGPRG-ATDWFERRVVEPDTVLQDILAALYPESDEFGSLERKWLR 417
Query: 338 NIAKGEGVVNIDAKMCDRDTSIP 360
++ E V + D D + P
Sbjct: 418 DVEADEAVGGVSDD--DLDAACP 438
>gi|321496471|gb|EAQ38465.2| Fe3+-specific periplasmic binding protein [Dokdonia donghaensis
MED134]
Length = 392
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 90/191 (47%), Gaps = 21/191 (10%)
Query: 142 EDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEFYN 201
E PL +AEWIKF G + E A+ ++ +K YL + A T P + Y
Sbjct: 203 EKEPLGKAEWIKFFGALYSKEKEADSIFTTIKNQYLATKKQLASVTS--SPTILSGAMYK 260
Query: 202 GVWSFTK-EAFKLKYVEDAGGENVDSSINKMTYNISNSDDLEQLHAILCTVDVVID---- 256
VW K ++++ K +EDAGG + + D E + +I +++ V++
Sbjct: 261 DVWYLPKGDSWQAKVLEDAGGSYLWA-------------DTEGVGSIALSIESVLEKGQQ 307
Query: 257 GTYTLEPANYTQSTFLENIDAADKSCFAFLTNQSLWRFDKRNQNSLALDWFDGAVSQPQL 316
+ + P YT + L + + A AF N+ ++ F K + L +++ A ++P L
Sbjct: 308 ADFWIAPGQYTSYSKLLSDNPAYGQFDAF-KNKKVYTFAKSKGATGGLLYYELAPNRPDL 366
Query: 317 VLADLTEALFP 327
VL DLT+ L P
Sbjct: 367 VLRDLTKILHP 377
>gi|392396245|ref|YP_006432846.1| Fe3+-hydroxamate ABC transporter periplasmic protein [Flexibacter
litoralis DSM 6794]
gi|390527323|gb|AFM03053.1| ABC-type Fe3+-hydroxamate transport system, periplasmic component
[Flexibacter litoralis DSM 6794]
Length = 388
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 89/366 (24%), Positives = 149/366 (40%), Gaps = 67/366 (18%)
Query: 2 PSDISKVEDAQNFHIYYGQTFKVI----KNAIDGRSYLLIQNNSRMAARTKYCTARIKSF 57
P D K+ A F Y + F+ I KN + YLL + ++ KY A
Sbjct: 35 PIDSVKLIHANQFRSYSYKDFETIEVFDKNKKLQQRYLLYKGKNKPTTNLKYDVA----L 90
Query: 58 VIPMSNY-SVDTDFFPGKLLGLLSSMKGMT----SESVASGCVLKLYQGGEI-------- 104
IP+ S T + + LL ++ + S+ V++ + K + G+I
Sbjct: 91 QIPLKRMISRSTKY--ATFISLLDNVNNLVGFVGSKYVSNQEIRKNIENGKIKEVGNDDG 148
Query: 105 ------GLVNKSEPLQFSQYAAHFTTDSDQPQA----------CNFANFAPFGEDGPLRR 148
GLVN F+ A+ + SD Q CN E PL +
Sbjct: 149 SGVNFEGLVNLEPDAIFTYDASLYGGTSDTQQKMKELGLPMIICN-----ETLESSPLAQ 203
Query: 149 AEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEFYNGVWSF-T 207
AEWIKF G+ +A +++N VK NY L + A + KP + + +YN W
Sbjct: 204 AEWIKFFGVLFEKGEQATEIFNNVKSNYDSLKNLTASIKEKNKPTLFFNAWYNETWFMPN 263
Query: 208 KEAFKLKYVEDAGGENVDSSINKMTYNISNSDDLEQLHAILCTVDVVIDGTYTLEPANY- 266
E++ ++ +DAG I +DLE A ++ V + E A+Y
Sbjct: 264 GESYVAQFAKDAGA-------------IYLWNDLEGTGASPLAIESVYERA---EKADYW 307
Query: 267 ---TQSTFLENIDAADKSCFAF--LTNQSLWRFDKRNQNSLALDWFDGAVSQPQLVLADL 321
+ + + ++D+ +F + N+S++ +KR S D+F+ V+ P +L D
Sbjct: 308 FHASDWKNMNQLISSDRRFVSFKSVKNKSVFNHNKRQLKSGGNDYFESGVAFPDKILEDF 367
Query: 322 TEALFP 327
+ L P
Sbjct: 368 IKILHP 373
>gi|269124614|ref|YP_003297984.1| periplasmic binding protein [Thermomonospora curvata DSM 43183]
gi|268309572|gb|ACY95946.1| periplasmic binding protein [Thermomonospora curvata DSM 43183]
Length = 437
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 93/370 (25%), Positives = 155/370 (41%), Gaps = 60/370 (16%)
Query: 8 VEDAQNFHIYYGQTFKVI--KNAIDG---RSYLLIQNNSRMAARTKYCTARIKSFVI--- 59
+ A NF + Y + ++V+ K G ++Y+L+ R +K V+
Sbjct: 92 IRHATNFTLTYAKNYQVVTVKQPAPGAKPQTYVLV----RCGTPAPKAEGELKDAVVVET 147
Query: 60 PMSN-YSVDTDFFPGKL-LGLLSSMKGMTS----------ESVASGCVLKL--YQGGEIG 105
P+ ++ T P LG+L +KG+ S E VA+ +++ G EI
Sbjct: 148 PVRTLFASSTTHLPFITDLGVLDRLKGVASAGLITSPQVRERVAAKQIIEYADITGQEI- 206
Query: 106 LVNKSEPLQFSQYAAHFTTDSDQPQACNFANF-------APFGEDGPLRRAEWIKFLGIF 158
+E + ++ T +D P N A + E L RAEWIKF+
Sbjct: 207 ---DTEKVIGARPDVLMTDGNDVPAHQTLRNAGIKIVANAEWQETSALGRAEWIKFVAAL 263
Query: 159 ANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPI-VAWMEFYNGVWSFTK-EAFKLKYV 216
EA+A +V++ V Y L A K K +P+ V + + G W+ E+F K +
Sbjct: 264 TGTEAKATEVFDKVAAAYQEL----AAKAKQAEPVSVLPGQMFQGQWAIPNGESFMAKLI 319
Query: 217 EDAGGENVDSSINKMTYNISNSDDLEQLHAILCTV-DVVIDGTYTLEPANYTQSTFLENI 275
DAGG TY +++ + L TV D L N +S LE++
Sbjct: 320 ADAGG----------TYAWADTKGTGSTNLDLETVLSKARDAEVWLPQMNDWKS--LEDV 367
Query: 276 DAADK--SCFAFLTNQSLWRFDKRNQNSLALDWFDGAVSQPQLVLADLTEALFP--TGNY 331
AD + FA + +W +K D+++ V +P L+LADL L P +
Sbjct: 368 RKADPRYAEFAAFKSGKVWSMNKVLGPGGGNDFYERGVGRPDLILADLVAILHPELMPGH 427
Query: 332 TITYFRNIAK 341
T T+++ +A+
Sbjct: 428 TFTFYQQLAR 437
>gi|354567165|ref|ZP_08986335.1| ABC-type transporter, periplasmic subunit [Fischerella sp. JSC-11]
gi|353543466|gb|EHC12924.1| ABC-type transporter, periplasmic subunit [Fischerella sp. JSC-11]
Length = 403
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 90/364 (24%), Positives = 158/364 (43%), Gaps = 55/364 (15%)
Query: 11 AQNFHIYYGQTFKVI------KNAIDGRSYLLIQNNSRMAARTKYCTARIKSFVIPMSNY 64
A F + Y + +K++ +NA G Y+L+Q + A + +++I +P++
Sbjct: 62 ATGFDVEYHKNYKLVTVKNPWQNAKTGFQYILVQCGT--PAPKNFQSSQI--ITVPINTV 117
Query: 65 -SVDTDFFPG-KLLGLLSSMKGMT-SESVASGCVLKLYQGGEIGLVNKSEPLQFSQYAAH 121
S+ T P LGL+ + G++ ++ V + V++ + G++ V SE + +
Sbjct: 118 VSLSTTHLPHFAKLGLVDKLIGVSNTKRVNTPEVIQKIKAGKVAEVGNSESINIEKILEL 177
Query: 122 -----FTTDSDQPQ----------ACNFANFAPFGEDGPLRRAEWIKFLGIFANAEARAN 166
T PQ A A + E PL AEW+KF +F N E A
Sbjct: 178 NPDLIMTYGVGNPQIDSHHKLIEAGLKVAINAEYMETSPLGHAEWLKFTALFFNQENIAQ 237
Query: 167 QVYNAVKENYLCLTRVAAGKTKPFK--PIVAWMEFYNGVWSFTK-EAFKLKYVEDAGGEN 223
+ +N + Y + A KTK K P V + GVW +++ KY+ DAG
Sbjct: 238 KTFNQISTKYENI----ASKTKSVKNRPTVFTGFNFKGVWYIPGCQSYVAKYLADAGSNY 293
Query: 224 VDSSINKMTYNISNSDDL--EQLHAILCTVDVVIDGTYTLEPANYTQSTFLENIDAADK- 280
+ + N S S L E + + D Y L + QS L+++ + D
Sbjct: 294 LCAD------NSSGSKPLSFENVFQRAASAD------YWLNLSQSWQS--LKDVISEDNR 339
Query: 281 -SCFAFLTNQSLWRFDKRNQNSLALDWFDGAVSQPQLVLADLTEALFPT--GNYTITYFR 337
+ FA + +++ + R NS D+++ S P +VL+DL + L P N+ + Y+R
Sbjct: 340 YANFAAVKTGNVYNNNARVNNSGGNDYWESGTSNPDIVLSDLIKILHPEILPNHQLVYYR 399
Query: 338 NIAK 341
+ K
Sbjct: 400 KLEK 403
>gi|303276354|ref|XP_003057471.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226461823|gb|EEH59116.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 614
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 93/378 (24%), Positives = 148/378 (39%), Gaps = 71/378 (18%)
Query: 6 SKVEDAQNFHIYYGQTFKVIKN----------AIDGRSYLLIQNNSRMAARTKYCTA--- 52
S V+ AQNF + Y +KV+K+ + +Y+L + Y A
Sbjct: 69 SVVQIAQNFKVSYHGYYKVVKHQCFSGNGASASCTPETYILTMCGAPKPDVDVYGNAWPA 128
Query: 53 RIKSFVIPMS----NYSVDTDFFPGKLLGLLSSMKGMTSESVASGCVLKLYQGGEIGLVN 108
K F IP+ + +V F ++L L +K + S C+ + E+G+++
Sbjct: 129 ATKHFQIPLKGVAFSLTVVEPFM--EMLNLRDKVKMVDHSYSHSPCIQR---DEELGVID 183
Query: 109 KSEPLQFS----------------QYAAHFTTDSDQPQACNFAN---FAPFGEDGPLRRA 149
+ L S A FT + A + + F + G L R
Sbjct: 184 GQDSLDASWATPAAWNDKINGGVADIDAVFTDSWNSGAASDASKNVVFDASTDPGILNRG 243
Query: 150 EWIKFLGIFANAEARANQVY----------NAVKENYLCLTRVAAGKTKPFKPIVAWMEF 199
EWIKF+G+F N E +AN + ++ R+ G K AW+E+
Sbjct: 244 EWIKFIGVFFNEEQQANAYFEREVAEFNRVESLAHEARWNNRLKTGTVK----TCAWIEY 299
Query: 200 --YNGVWSFTKEAFKLKYVEDAGGENV-DSSINKMTYNISNSDDLEQLHAILCTVDVVID 256
++ VW + +K AG V D+ + T+ + S L A + VDVV D
Sbjct: 300 SSWSSVWKLKYDQYKQDLCISAGLTPVTDAGATEQTFANATS-----LAAKIANVDVVFD 354
Query: 257 GTYTLEPANYTQSTFLENIDAAD---KSCFAFLTNQSLWRFDKRNQNSLA----LDWFDG 309
TY +P YT+ + A+ KS FL DK +SL ++W
Sbjct: 355 ETYNADPTTYTKDAAFAALGFAESDLKSSVLFLRTD-YHVTDKTTGDSLPANRNVNWLAE 413
Query: 310 AVSQPQLVLADLTEALFP 327
V +P VLADL ++P
Sbjct: 414 GVGRPASVLADLVARVWP 431
>gi|332292849|ref|YP_004431458.1| periplasmic binding protein [Krokinobacter sp. 4H-3-7-5]
gi|332170935|gb|AEE20190.1| periplasmic binding protein [Krokinobacter sp. 4H-3-7-5]
Length = 393
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 91/192 (47%), Gaps = 23/192 (11%)
Query: 142 EDGPLRRAEWIKFLGIFANAEARANQVYNAVKENY-LCLTRVAAGKTKPFKPIVAWMEFY 200
E PL +AEWIKF G E A+ ++N +K NY L ++AA + KP V +
Sbjct: 204 EKDPLGKAEWIKFFGALYGKEREADSIFNHIKNNYNLIKEQIAAIEN---KPTVLSGGMF 260
Query: 201 NGVWSFTK-EAFKLKYVEDAGGENVDSSINKMTYNISNSDDLEQLHAILCTVDVVID--- 256
+W K ++++ K +EDAGG + S + E +I +++ V++
Sbjct: 261 KDIWYLPKGDSWQAKVLEDAGGNYLWS-------------ETEGAGSIALSIESVLEKGQ 307
Query: 257 -GTYTLEPANYTQSTFLENIDAADKSCFAFLTNQSLWRFDKRNQNSLALDWFDGAVSQPQ 315
+ + P YT L + + A AF N+ ++ F K + L +++ A ++P
Sbjct: 308 QADFWIAPGQYTSYAKLASDNPAYAQFDAF-KNKKVYTFAKYKGETGGLLYYELAPNRPD 366
Query: 316 LVLADLTEALFP 327
LVL DL + L P
Sbjct: 367 LVLRDLAKILHP 378
>gi|441499232|ref|ZP_20981418.1| periplasmic binding protein [Fulvivirga imtechensis AK7]
gi|441436765|gb|ELR70123.1| periplasmic binding protein [Fulvivirga imtechensis AK7]
Length = 371
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 94/363 (25%), Positives = 149/363 (41%), Gaps = 65/363 (17%)
Query: 2 PSDIS-KVEDAQNFHIYYGQTFKVI------KNAIDGRSYLLIQNNSRMAAR-------- 46
P+D+S K++ A F++ Y +K + + A +G YLL+Q +
Sbjct: 22 PTDLSTKIDYATGFNVKYENGYKWVEIPRPYQEAKEGFKYLLVQKGQDIPEHDVSVQVIS 81
Query: 47 ----TKYCTARIKSFVIPMSNYSVDTDFFPGKLLGLLSSMKGMTSESVASGCVLKLYQGG 102
T CT+ IP+ +Y +T+ KL+G S+ + ++S KL G
Sbjct: 82 IPLETIICTSTSH---IPLLDYLNETE----KLIGFPST------QYISSSNARKLIDAG 128
Query: 103 ---EIGLVNKSEPLQFSQYAAHF------TTDSDQPQACNFANF-----APFGEDGPLRR 148
E+G+ +K + + A T D Q + A A + E+ PL R
Sbjct: 129 KVTELGIDSKMNIEKVIELDAEMVMGYSITGDYGQFRKLQQAGIPVVINAEYIEEHPLGR 188
Query: 149 AEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEFYNGVWSFTK 208
AEWIKF+ +F N E A+ V+N +K NYL L A T +P V Y W
Sbjct: 189 AEWIKFMALFFNKEKMADSVFNEIKYNYLKLKN--ATDTISSRPTVYSGVVYGDAWFLPG 246
Query: 209 EAFKL-KYVEDAGGENVDSSINKMTY-NISNSDDLEQLHAILCTVDVVIDGTYTLEPANY 266
+ K +DAG + + S N Y S E+ H V V A+Y
Sbjct: 247 GQNNMAKLFKDAGAKYLWSEDNSTGYLEYSFESVYEKAHNADFWVGV----------ASY 296
Query: 267 TQSTFLENIDAADK--SCFAFLTNQSLWRFDKRNQNSLALDWFDGAVSQPQLVLADLTEA 324
LE I ADK + F N +++ ++ R + ++ + +P L+L DL +
Sbjct: 297 NS---LEEIKQADKRYTDFEAFQNGNVYSYNARMGPTGGNEFLELGYLRPDLILEDLIKI 353
Query: 325 LFP 327
P
Sbjct: 354 FHP 356
>gi|409356684|ref|ZP_11235071.1| periplasmic binding protein [Dietzia alimentaria 72]
Length = 368
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 83/364 (22%), Positives = 147/364 (40%), Gaps = 43/364 (11%)
Query: 4 DISKVEDAQNFHIYYGQTFKVIK-----NAIDGRSYLLIQNNSRMAARTKYCTARIKSFV 58
D S + DA+N I Y ++++V+ SY+L++ + T + + V
Sbjct: 21 DKSTIRDAENVSIDYHESYQVVTVEQPFPGASRESYVLVKCGAPPPELTGDLASAPQITV 80
Query: 59 IPMSNYSVDTDFFPGKL-LGLLSSMKGMTSESVASGC-VLKLYQGGEI-----GLVNKSE 111
S YS T P LG + + G+ + + SG ++ GE+ G E
Sbjct: 81 PVQSLYSASTTHLPLLADLGRMDVLAGVANAANVSGAEAIERIDSGEVVEYAPGQTINVE 140
Query: 112 PLQFSQYAAHFTTDSDQPQACNFANF-------APFGEDGPLRRAEWIKFLGIFANAEAR 164
+ T +D+P + A + E PL RAEW+K + +E +
Sbjct: 141 KVITEAPDVLMTQGTDEPVYGKIRDAGVPVIANAEWLESTPLGRAEWLKVMAALTGSEKK 200
Query: 165 ANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEFYNGVWSF-TKEAFKLKYVEDAGGEN 223
A++VY ++ +YL + AAG P + ++ + Y G W ++ + + DAGG
Sbjct: 201 ADEVYTRIRSDYLEVVDSAAG--APARDVLP-GQMYEGTWYMPAGGSYVGRLIADAGG-- 255
Query: 224 VDSSINKMTYNISNSDDLEQLHAILCTVDVVIDGTYTLEPANYTQSTFLENIDA-ADKSC 282
TY ++ D L + V + T P S + DA AD
Sbjct: 256 --------TYPWADDDATGSLQ---LNFESVFNQAGTA-PIWLVTSDWDTGADALADDPR 303
Query: 283 FAFLT---NQSLWRFDKRNQNSLALDWFDGAVSQPQLVLADLTEALFP--TGNYTITYFR 337
+ L+ W +K D+++ V++P LVLADL L P ++ +++R
Sbjct: 304 YGTLSAMHEGGTWSANKAMGPRGGNDFYERGVTRPDLVLADLVAILHPELAPDHEFSFYR 363
Query: 338 NIAK 341
+ +
Sbjct: 364 EVPR 367
>gi|313676005|ref|YP_004054001.1| periplasmic binding protein [Marivirga tractuosa DSM 4126]
gi|312942703|gb|ADR21893.1| periplasmic binding protein [Marivirga tractuosa DSM 4126]
Length = 379
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 91/192 (47%), Gaps = 13/192 (6%)
Query: 138 APFGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWM 197
A + E+ PL RAEW+K + + + ++ +++ENYL ++A + KP V
Sbjct: 185 ADYLENSPLGRAEWLKLTAVILDKYNEGDSLFTSIEENYLATKKIAEKANQ--KPSVMTG 242
Query: 198 EFYNGVWSFT-KEAFKLKYVEDAGGENVDSSINKMTYNISNSDDLEQLHAILCTVDVVID 256
Y VW E+F K++EDAGG+ + S N T +I S + ++
Sbjct: 243 VMYGDVWYVPGGESFAAKFIEDAGGKYLWSD-NPKTGSIELSFE--------SVLEKAKK 293
Query: 257 GTYTLEPANYTQSTFLENIDAADKSCFAFLTNQSLWRFDKRNQNSLALDWFDGAVSQPQL 316
+ + A++T+ L+N + + S F N ++ + KR + A D+ + +P L
Sbjct: 294 ADFWIGAASFTKLEELKNSN-TNYSLFDSFENGEIYSYTKRVNKNGANDFLESGYMRPDL 352
Query: 317 VLADLTEALFPT 328
+L D + L P+
Sbjct: 353 ILKDYLKILHPS 364
>gi|372221787|ref|ZP_09500208.1| ABC transporter periplasmic-binding protein [Mesoflavibacter
zeaxanthinifaciens S86]
Length = 388
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 95/206 (46%), Gaps = 27/206 (13%)
Query: 140 FGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEF 199
+ E PL +AEWIKF G+ E +A+ ++ + ++Y ++A KT P V
Sbjct: 197 WAETHPLGKAEWIKFFGVLLGKEKQADSIFTQIAKDYNATKKLAQNKTN--NPTVISGAL 254
Query: 200 YNGVWSF-TKEAFKLKYVEDAGGENVDSSINKMTYNISNSDDLEQLHAILCTVDVVID-G 257
Y VW T E++ K++ DAGG + D + ++ +V+ V+ G
Sbjct: 255 YKDVWYMPTGESWAAKFIADAGGNYL-------------YKDTKGNGSLALSVEAVLQKG 301
Query: 258 T---YTLEPANYTQSTFLENIDAADKSC--FAFLTNQSLWRFDKRNQNSLALDWFDGAVS 312
T Y + PA +T + ++AA+ F T++ ++ F + L +++ A
Sbjct: 302 TQADYWIGPAQFTA---YQEMNAANPHYQQFKAFTDKKVYTFSNTKGLTGGLLYYELAPQ 358
Query: 313 QPQLVLADLTEALFP--TGNYTITYF 336
+P LVL DL L P NY+ +F
Sbjct: 359 RPDLVLKDLVHWLHPDLLPNYSPYFF 384
>gi|384097905|ref|ZP_09999024.1| ABC transporter periplasmic-binding protein [Imtechella
halotolerans K1]
gi|383836051|gb|EID75464.1| ABC transporter periplasmic-binding protein [Imtechella
halotolerans K1]
Length = 375
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 87/189 (46%), Gaps = 13/189 (6%)
Query: 140 FGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEF 199
+ E PL +AEWIKF F E+ A+ ++N +K NY +AA TK +P V
Sbjct: 184 WNETSPLGKAEWIKFFAPFFQKESLADSLFNEIKSNYQQAKEIAANATK--RPTVFSGAM 241
Query: 200 YNGVWSF-TKEAFKLKYVEDAGGENVDSSINKMTYNISNSDDLEQLHAILCTVDVVIDGT 258
Y VW E++ +++EDA E + K T +++ S I D I+
Sbjct: 242 YKDVWYLPAGESWAAQFIEDANAEYLWKD-TKGTGSLALS--------IESVYDTAINAD 292
Query: 259 YTLEPANYTQSTFLENIDAADKSCFAFLTNQSLWRFDKRNQNSLALDWFDGAVSQPQLVL 318
+ + P+ +T T +E+ + FA + ++ ++K + +F+ A +P L+L
Sbjct: 293 FWISPSQFTNYTQMESANKMYME-FAAFKQKHIYTYNKTIGATGGSLYFELAPQRPDLIL 351
Query: 319 ADLTEALFP 327
DL P
Sbjct: 352 KDLIYIFHP 360
>gi|422294150|gb|EKU21450.1| periplasmic binding protein [Nannochloropsis gaditana CCMP526]
Length = 551
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 107/248 (43%), Gaps = 33/248 (13%)
Query: 137 FAPFGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAW 196
F+ E L R EW+KF F N + A Q ++ +E Y L+ A K P +P V++
Sbjct: 203 FSATSETSLLGRGEWLKFAAAFFNLDGVAEQKFDRTREKYYELSDAA--KANPSRPKVSF 260
Query: 197 --MEFYN----GVWSFTKEAFKLKYVEDAGG--ENVD-----------SSINKMTYNISN 237
++ Y + +K V DAGG NV+ S++ + +
Sbjct: 261 VNVDTYGDSTVDYFMIDVAGYKRSAVLDAGGYIANVEDFVGAPNVSFPSTMRAARWAVPK 320
Query: 238 SDDLEQLHAI------LCTVDVVIDGTYTLEPANYTQSTFLENIDAADKSCFAFLTNQSL 291
E+ AI L D++ID Y+ + +S + D + F+ + L
Sbjct: 321 EAGAEREAAIKAFAANLKDTDILIDERYSPSVLSRDESLAAYGLSGNDME-YPFIAHGKL 379
Query: 292 WRFDKRNQNSLALDWFDGAVSQPQLVLADLTEALFPT----GNYTITYFRNIAKGEGVVN 347
+R D R ++ WF+ VS+P +VL D + + P+ ++ + R++A+GE
Sbjct: 380 YRED-RTGSATGSAWFESGVSRPDIVLMDFIKVIQPSTPAVASHERVFLRDLAQGETKQV 438
Query: 348 IDAKMCDR 355
+ A C+R
Sbjct: 439 VTAAECER 446
>gi|75812443|ref|YP_320062.1| periplasmic binding protein [Anabaena variabilis ATCC 29413]
gi|75705199|gb|ABA24873.1| Periplasmic binding protein [Anabaena variabilis ATCC 29413]
Length = 400
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 104/218 (47%), Gaps = 36/218 (16%)
Query: 138 APFGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAA-GKTKPFKPIVAW 196
A + ED PL R+EW+KF +F N EA+A ++++ + + Y T++AA ++ ++P V
Sbjct: 205 AEYMEDTPLGRSEWLKFTALFFNQEAKAEKIFSEIAQKY---TQIAAKAQSVKYRPSVFV 261
Query: 197 MEFYNGVWSF-TKEAFKLKYVEDAGGENVDSSINKMTYNISNSDDLEQLHAILCTVDVVI 255
+ G W ++ KY+ DAGG N SDD ++ + +VV+
Sbjct: 262 GFNFKGTWFMPAGNSYVAKYLADAGG------------NYLWSDDKSN-GSLPLSFEVVL 308
Query: 256 D----GTYTLEPANYTQS------TFLENIDAADKSCFAFLTNQSLWRFDKRNQNSLALD 305
+ Y L N++Q E+ AD F + +L+ + R + D
Sbjct: 309 ERAANADYWL---NFSQGWQNVKDLITEDNRYAD---FQAVKTGNLYNNNARVNANGGND 362
Query: 306 WFDGAVSQPQLVLADLTEALFPT--GNYTITYFRNIAK 341
+++G +S P +VLADL + L P N+ + Y+R K
Sbjct: 363 YWEGGISNPDIVLADLIKILHPEILPNHQLFYYRKFNK 400
>gi|219125255|ref|XP_002182900.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217405694|gb|EEC45636.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 456
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 80/349 (22%), Positives = 140/349 (40%), Gaps = 32/349 (9%)
Query: 11 AQNFHIYYGQTFKVIKNAIDGRSYLLIQNNSRMAARTKYCTARIKSFVIPMSNYSVDTDF 70
+Q +++ Y T+K+ N D +YLL Q S A IP+SN +
Sbjct: 50 SQGWNVTYHNTYKIANNLFDNTTYLLYQCGSTPPADVVDNGNFNAVLEIPLSNVGLSQTP 109
Query: 71 FPGKL--LGLLSSMKGMTSES--VASGCVL-KLYQGGEIGLVNKSEPLQ--------FSQ 117
G + L L+ + +++ ++S C L ++ G + LV SE + S
Sbjct: 110 HIGFMEQLELVDEIAAFLTDTDFISSPCFLDEIAAGNVLTLVEPSEGVDAPATGNTALSA 169
Query: 118 YAAHFTTDSDQPQACNFANFAPFGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYL 177
F Q N N + E + EW+KF +F N E ANQV A + +
Sbjct: 170 GTVAFVASFTQVPFDNTVNIQEYSELTNVAVFEWVKFFSVFFNKEHTANQVVEAAESRFD 229
Query: 178 CLTRVAA---GKTKPFKPIVAWMEF--YNGVWSFTK-EAFKLKYVEDAGGENVDSSINKM 231
C+ + A P KP+V W + + G W + + ++ G E + S+
Sbjct: 230 CVAQNAGAVQADNMPVKPVVLWAYYSDFCGGWDVAECPNYYCEFANACGAEIISSTEGNT 289
Query: 232 TYNISNSDDLEQLHAILCTVDVVIDGTYTLEPANYTQSTFLENIDAADKSCFAFLTNQSL 291
T + E+L + D I + + A+ T L+N+ A + +Q +
Sbjct: 290 TVCGAPYMTTEELVELGKDADHWIYPSSNWDTASETFGEQLQNMKA--------VQDQQV 341
Query: 292 WRFDKRNQNSLALDWFDGAVSQPQLVLADLTEALFPTGNYT-ITYFRNI 339
+ + +N+ WF+ ++ VLAD + T T ++FRN+
Sbjct: 342 FDYQASGENA----WFEQRYAEYYNVLADFCAVVGTTQPLTGRSWFRNV 386
>gi|307354369|ref|YP_003895420.1| periplasmic binding protein [Methanoplanus petrolearius DSM 11571]
gi|307157602|gb|ADN36982.1| periplasmic binding protein [Methanoplanus petrolearius DSM 11571]
Length = 408
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 87/364 (23%), Positives = 154/364 (42%), Gaps = 50/364 (13%)
Query: 9 EDAQNFHIYYGQTFKVIKNAID-------GRSYLLIQNNSRMAARTKYCTARIKSFVIPM 61
E A+ F + Y +KV+ + ID R+YLL+Q + + A Y A + F IP+
Sbjct: 61 EYAEGFEVEYHDNYKVL-SIIDPWGRESGNRTYLLVQKGTEVPA--GYDDAAV--FYIPV 115
Query: 62 SNYS-VDTDFFPGKL-LGLLSSMKGMTS-ESVASGCVLKLYQGGEIGLVNKSEPLQFSQY 118
+ + + T P +G + ++K +++ + + + ++ Y G I V+ ++ S
Sbjct: 116 ESVAALSTTQIPHIANIGEIDTIKIVSNIQYINNPEIIDHYDEGLIHDVSTADSSMTSGL 175
Query: 119 AAHFTTDSD----------QPQACNFANFAPFG----------EDGPLRRAEWIKFLGIF 158
A D++ P + + G E PL RAEWIK+ +F
Sbjct: 176 DAEILIDAEPDAVFVSAMENPDYDDSSKIRELGLKPVIVSEYMEKTPLARAEWIKYFSLF 235
Query: 159 ANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEFYNGVWSFT-KEAFKLKYVE 217
N E AN +++ + Y ++ A G + KP V Y G W E++ + +E
Sbjct: 236 YNREEEANALFDEIVSRYDNVSAKAKGVGE--KPTVFSGNDYYGTWYMPGGESYVAQLIE 293
Query: 218 DAGGENVDSSINKMTYNISNSDDLEQLHAILCTVDVVIDGTYTLEPANYTQSTFLENIDA 277
DAG + + S N S D E ++ D I+ + AN E+
Sbjct: 294 DAGADYLWSDDNSTG---SIPLDFEAVYDTAADADYWIN----MGTANTAGELLAED--- 343
Query: 278 ADKSCFAFLTNQSLWRFDKRNQNSLALDWFDGAVSQPQLVLADLTEALFPT--GNYTITY 335
S F N SL+ + R D+++ V++P LVL DL + P ++ + Y
Sbjct: 344 ERYSKFDAFQNDSLYNNNARVNEFGGNDYWESGVARPDLVLMDLIKIFHPEILPDHELYY 403
Query: 336 FRNI 339
+++I
Sbjct: 404 YKHI 407
>gi|390946393|ref|YP_006410153.1| Fe3+-hydroxamate ABC transporter periplasmic protein [Alistipes
finegoldii DSM 17242]
gi|390422962|gb|AFL77468.1| ABC-type Fe3+-hydroxamate transport system, periplasmic component
[Alistipes finegoldii DSM 17242]
Length = 384
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 81/185 (43%), Gaps = 11/185 (5%)
Query: 142 EDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEFYN 201
E+ PL +AEW+ N +R + + + E Y + AG +P V Y
Sbjct: 193 EESPLGKAEWLMVAAELCNDRSRGAETFGGIAERYRAVKTAVAGSAPAVRPKVMLNTPYR 252
Query: 202 GVWSF-TKEAFKLKYVEDAGGENVDSSINKMTYNISNSDDLEQLHAILCTVDVVIDGTYT 260
W + +F ++ +EDAGGE V K + S + DLE+ + + + DV ++
Sbjct: 253 DTWFMPSSRSFMIRLIEDAGGEYV---YTKNDSDTSVAVDLEEAYLLASSADVWLN---- 305
Query: 261 LEPANYTQSTFLENIDAADKSCFAFLTNQSLWRFDKRNQNSLALDWFDGAVSQPQLVLAD 320
+ P N +N A + N+ ++ ++R + D+++ V P LVL D
Sbjct: 306 VGPCNTLAELTAQNPKFAG---IPAVRNRMVFNNNRRQTPAGGSDFWESGVIHPDLVLRD 362
Query: 321 LTEAL 325
L+ L
Sbjct: 363 LSLIL 367
>gi|334364536|ref|ZP_08513522.1| conserved hypothetical protein [Alistipes sp. HGB5]
gi|313159242|gb|EFR58611.1| conserved hypothetical protein [Alistipes sp. HGB5]
Length = 323
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 88/203 (43%), Gaps = 13/203 (6%)
Query: 140 FGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEF 199
+ E+ PL +AEW+ N +R + + + E Y + AG +P V
Sbjct: 130 YMEESPLGKAEWLMVAAELCNDRSRGAETFGGIAERYRAVKTAVAGSAPAVRPKVMLNTP 189
Query: 200 YNGVWSF-TKEAFKLKYVEDAGGENVDSSINKMTYNISNSDDLEQLHAILCTVDVVIDGT 258
Y W + +F ++ +EDAGGE V K + S + DLE+ + + + DV ++
Sbjct: 190 YRDTWFMPSSRSFMIRLIEDAGGEYV---YTKNDSDTSVAVDLEEAYLLASSADVWLN-- 244
Query: 259 YTLEPANYTQSTFLENIDAADKSCFAFLTNQSLWRFDKRNQNSLALDWFDGAVSQPQLVL 318
+ P N +N A + N+ ++ ++R + D+++ V P LVL
Sbjct: 245 --VGPCNTLAELTAQNPKFAG---IPAVRNRMVFNNNRRQTPAGGSDFWESGVIHPDLVL 299
Query: 319 ADLTEALF--PTGNYTITYFRNI 339
DL+ L P + Y++ +
Sbjct: 300 RDLSLILGGKPAEEGELHYYKRL 322
>gi|17231523|ref|NP_488071.1| periplasmic-binding protein of ABC transporter [Nostoc sp. PCC
7120]
gi|17133166|dbj|BAB75730.1| periplasmic-binding protein of ABC transporter [Nostoc sp. PCC
7120]
Length = 426
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 88/375 (23%), Positives = 162/375 (43%), Gaps = 59/375 (15%)
Query: 2 PSDISKVEDAQNFHIYYGQTFKVI------KNAIDGRSYLLIQNNSRMA---ARTKYCTA 52
P+ I K+ A+ + Y + +KV+ +NA Y+L+Q + + + T
Sbjct: 76 PNKI-KITHARGLAVEYHKHYKVVTIKNPWQNAKTQFQYVLVQCGTPTPQGFKQAQVITV 134
Query: 53 RIKSFVIPMSNYSVDTDFFPG-KLLGLLSSMKGMT-SESVASGCVLKLYQGGEIGLVNKS 110
I S V S+ T P LG++ + G++ S+ V + V++ + G+I V +
Sbjct: 135 PIHSIV------SLSTTHLPHLAKLGVVDKLIGISNSKQVNTPDVVERIKAGKITQVGNN 188
Query: 111 EPLQFSQY-------AAHFTTDSDQPQA--------CNFANFAPFGEDGPLRRAEWIKFL 155
+ + F T + Q + A + ED PL R+EW+KF
Sbjct: 189 SNVDIERLLELNPDLVTTFGTGNSQTDSYSKLTEAGLKVGINAEYMEDTPLGRSEWLKFT 248
Query: 156 GIFANAEARANQVYNAVKENYLCLT-RVAAGKTKPFKPIVAWMEF-YNGVWSFT-KEAFK 212
+F N E +A +++ + + Y + +V + K +P ++ F + G W ++
Sbjct: 249 ALFFNQEEKAEKIFAEITDKYEQVAQKVKSVKNRP----TVFVGFNFKGTWFMPGGNSYV 304
Query: 213 LKYVEDAGGENVDSSINKMTYNISNSDDLEQLH-AILCTVDVVIDGTYTLEPANYTQS-T 270
KY+ DAGG+ Y SN L + ++ + Y L N++QS
Sbjct: 305 AKYLADAGGD----------YLWSNEQSAGSLPLSFEVVLERATNADYWL---NFSQSWQ 351
Query: 271 FLENIDAADKSCFAFLTNQ--SLWRFDKRNQNSLALDWFDGAVSQPQLVLADLTEALFPT 328
L+++ A D F + + +L+ + R S D+++G +S P +VL+DL L P
Sbjct: 352 SLKDLLAEDNRYADFKSVKIGNLYNNNARVNESGGNDYWEGGISNPDIVLSDLIRILHPE 411
Query: 329 --GNYTITYFRNIAK 341
N+ + Y+ I K
Sbjct: 412 ILPNHQLFYYHKILK 426
>gi|88601589|ref|YP_501767.1| periplasmic binding protein [Methanospirillum hungatei JF-1]
gi|88187051|gb|ABD40048.1| periplasmic binding protein [Methanospirillum hungatei JF-1]
Length = 394
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 84/373 (22%), Positives = 157/373 (42%), Gaps = 67/373 (17%)
Query: 9 EDAQNFHIYYGQTFKVI------KNAIDGRSYLLIQ---NNSRMAARTKYCTARIKSFVI 59
E A F + Y + +KV+ + + + +Y+L++ + + + T + FV
Sbjct: 46 EYATGFSVEYHEGYKVVTVTKPWRGSDESYTYVLVKPGVSPPHLGKGEEIITIPSERFVS 105
Query: 60 PMSNYSVDTDFFPGKLLGLLSSMKGMT-SESVASGCVLKLYQGGEI-------------- 104
S Y + P +LG+ SS+KG+T + +V + V+ L Q G++
Sbjct: 106 LSSTY---LPYLP--ILGITSSLKGVTNTNTVYTPEVMNLIQEGKVIDVSGGGSGMATGI 160
Query: 105 ---GLVNKSEPLQFS------QYAAHFT-TDSDQPQACNFANFAPFGEDGPLRRAEWIKF 154
L++ + L + +Y AH ++ P N A + E+ PL RAEWIKF
Sbjct: 161 NLETLIDLNPDLVMTYATGQPEYDAHPKLQEAGIPVVLN----AEYMEEDPLGRAEWIKF 216
Query: 155 LGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEFYNGVWSFT-KEAFKL 213
+ +F N E AN + +K Y L + + P V + G W+ +++
Sbjct: 217 ISVFFNREKEANAYFEKIKNEYQSLEK-SVHFLNGTNPTVFVNNNWQGTWNMAGGQSYVA 275
Query: 214 KYVEDAGGENVDSSINKMTYNISNSDDLEQLHAILCTVDVVID----GTYTLEPANYTQS 269
+ + DAG + + S D +I ++V D Y L P T
Sbjct: 276 ELLRDAGADYLWS-------------DDTTTGSIPLDFEIVYDKGQNADYWLNPG--TAM 320
Query: 270 TFLENI-DAADKSCFAFLTNQSLWRFDKRNQNSLALDWFDGAVSQPQLVLADLTEALFP- 327
T E + + A S F + ++ ++ + R D+++ V+ P+ VL DL + P
Sbjct: 321 TLQELLGEDARYSEFTAVKSKKIYNNNARVNAGGGNDYWESGVAHPETVLKDLIKIFHPE 380
Query: 328 -TGNYTITYFRNI 339
++ + Y+R++
Sbjct: 381 IVSDHNLVYYRHL 393
>gi|296271447|ref|YP_003654079.1| periplasmic binding protein [Thermobispora bispora DSM 43833]
gi|296094234|gb|ADG90186.1| periplasmic binding protein [Thermobispora bispora DSM 43833]
Length = 401
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 93/208 (44%), Gaps = 25/208 (12%)
Query: 142 EDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEFYN 201
E PL RAEWIKF EA+A +++ V+ Y L A G KP ++ M Y+
Sbjct: 211 ESTPLGRAEWIKFFAALTGTEAKAAEIFGKVEREYTALAEKAKG-VKPATVLLGTM--YS 267
Query: 202 GVWSF-TKEAFKLKYVEDAGGENVDSSINKMTYNISNSDDLEQLHAILCTVD--VVIDGT 258
G W ++ ++DAGG + S S DLE + A +VI+ T
Sbjct: 268 GQWYMPAGGSYAATLLKDAGGTYAWAGTEGTG---SISLDLETVLAKAGHAPTWLVIENT 324
Query: 259 YTLEPANYTQSTFLENIDAADKSCFAFLT---NQSLWRFDKRNQNSLALDWFDGAVSQPQ 315
+ L +++ AD +A LT + ++W +K D+++ V++P
Sbjct: 325 WRT----------LADVEQADPR-YAKLTAVQDGNVWSANKVLGPGGGNDYYERGVARPD 373
Query: 316 LVLADLTEALFP--TGNYTITYFRNIAK 341
L+LADL L P + T++R + K
Sbjct: 374 LILADLIAILHPELAPGHEFTFYRRLTK 401
>gi|417933336|ref|ZP_12576661.1| periplasmic-binding protein [Propionibacterium acnes SK182B-JCVI]
gi|340771899|gb|EGR94413.1| periplasmic-binding protein [Propionibacterium acnes SK182B-JCVI]
Length = 420
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 90/207 (43%), Gaps = 19/207 (9%)
Query: 142 EDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEFYN 201
E PL RAEW+K G+ N EA + + ++ + + Y + + A G T +P V +
Sbjct: 225 ESDPLARAEWMKAYGVLLNKEALSAKAFDDITKRYDEVAKTAKGGTS--RPSVLVGQETK 282
Query: 202 GVWSFT-KEAFKLKYVEDAGGENVDSSINKMTYNISNSDDLEQLHAILCTVDVVIDGTYT 260
G W +++ ++++ DAG +V S K T + D E + D ++G Y
Sbjct: 283 GQWYVPGTDSYMIRFMSDAGASDVMSGAVKKTGAVPT--DSEVVFKYGSKADFWLNGNY- 339
Query: 261 LEPANYTQSTFLENIDAADK-----SCFAFLTNQSLWRFDKRNQNSLALDWFDGAVSQPQ 315
+ +T+ DA + + AF + +W KR D++ V P
Sbjct: 340 -----MSMTTWKTKADALKQNPRYGNLLAFQKGK-VWNPTKRTAPDTGNDFWQSGVVHPD 393
Query: 316 LVLADLTEALFP--TGNYTITYFRNIA 340
+VL DLT P YT Y++ +A
Sbjct: 394 IVLKDLTYIFHPDLMPGYTPYYYQKLA 420
>gi|390955698|ref|YP_006419456.1| Fe3+-hydroxamate ABC transporter periplasmic protein [Aequorivita
sublithincola DSM 14238]
gi|390421684|gb|AFL82441.1| ABC-type Fe3+-hydroxamate transport system, periplasmic component
[Aequorivita sublithincola DSM 14238]
Length = 382
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 93/205 (45%), Gaps = 23/205 (11%)
Query: 142 EDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEFYN 201
E PL +AEWIKF G N E A+ ++ ++ YL ++A+ K P V Y
Sbjct: 193 ETSPLGKAEWIKFFGALFNKEEEADSIFKLIETEYLSAKKIASEAKK--TPTVISGAMYK 250
Query: 202 GVWSFTK-EAFKLKYVEDAGGENVDSSINKMTYNISNSDDLEQLHAILCTVDVVIDGTYT 260
VW + E++ K++ DA G+ + D + + +++ V++ +
Sbjct: 251 DVWYMPQGESWGAKFIADANGDYL-------------WKDSKGTGGLSLSLESVLNEGHN 297
Query: 261 LE----PANYTQSTFLENIDAADKSCFAFLTNQSLWRFDKRNQNSLALDWFDGAVSQPQL 316
E P +T +++ D A AF T +++ + + + + +F+ A ++P L
Sbjct: 298 AEVWIGPGQFTSLNEMKSADQAYTQFAAFKTG-NVYSYSLKKGETGGVIYFELAPNRPDL 356
Query: 317 VLADLTEALFPT--GNYTITYFRNI 339
VL DL + L P N+ + +F I
Sbjct: 357 VLKDLIKILHPELYPNHELYFFDKI 381
>gi|383824485|ref|ZP_09979665.1| periplasmic binding protein [Mycobacterium xenopi RIVM700367]
gi|383337122|gb|EID15505.1| periplasmic binding protein [Mycobacterium xenopi RIVM700367]
Length = 396
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 82/365 (22%), Positives = 148/365 (40%), Gaps = 49/365 (13%)
Query: 4 DISKVEDAQNFHIYYGQTFKVI---KNAIDGR--SYLLIQNNSRMAARTKYCTARIKSFV 58
D S V DA F I Y +++V+ + +GR SY+L++ + T +
Sbjct: 49 DKSTVADATKFTISYHHSYQVLTVQQPYPNGRPQSYVLVRCGAPPPQLAGELT-HAQQIT 107
Query: 59 IPMSN-YSVDTDFFPGKL--LGLLSSMKGMTS----------ESVASGCVLKLYQGGEIG 105
+P++ YS T G + LG + G+ S + +A+G V + GG++
Sbjct: 108 VPVTTLYSASTTHL-GMISELGQTDVVTGVASAANVVSPRLRQRIAAGRVAEFAPGGQV- 165
Query: 106 LVNKSEPLQFSQYAAHFTTDSDQPQACNFANF-------APFGEDGPLRRAEWIKFLGIF 158
+E + ++ T +D P + A + E PL RAEW+K
Sbjct: 166 ---DAEAVIAARPDVLVTQGTDDPSYAKLRDAGVGVVADAEWLEPTPLGRAEWVKVFAAL 222
Query: 159 ANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPI-VAWMEFYNGVWSF-TKEAFKLKYV 216
E +A+ +Y ++++Y R A KT +P+ V E Y+G WS A+ + +
Sbjct: 223 TGTERKADAIYRKLRDDY----RNVAAKTARVRPVEVLPGEMYHGAWSMPAGGAYAGRLI 278
Query: 217 EDAGGENVDSSINKMTYNISNSDDLEQLHAILCTVDVVIDGTYTLEPANYTQSTFLENID 276
DAGG + +K ++ + + A + +VI T+ A + +
Sbjct: 279 ADAGG-GYPWAGDKRAGSLQLNFESVYAKAGQAPLWLVISNWTTINDALAQDNRYAR--- 334
Query: 277 AADKSCFAFLTNQSLWRFDKRNQNSLALDWFDGAVSQPQLVLADLTEALFP--TGNYTIT 334
A +W K D+++ V++P LVL+DL L P +
Sbjct: 335 ------LAATRTGQVWSATKSLGPGGGNDYWEHGVARPDLVLSDLVAILHPGLAPGHRFQ 388
Query: 335 YFRNI 339
++R +
Sbjct: 389 FYRRV 393
>gi|294101343|ref|YP_003553201.1| periplasmic binding protein [Aminobacterium colombiense DSM 12261]
gi|293616323|gb|ADE56477.1| periplasmic binding protein [Aminobacterium colombiense DSM 12261]
Length = 379
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 92/208 (44%), Gaps = 19/208 (9%)
Query: 142 EDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEFYN 201
E+ PL AEWIKF+ +F E +A + V E Y CL +A +P V
Sbjct: 185 EETPLGMAEWIKFVALFLGEEKKAEIFFRGVSERYNCLKELANKAEA--RPTVMVNAAIG 242
Query: 202 GVWSFT-KEAFKLKYVEDAGGENVDSSINKMTYNISNSDDLEQLHAILCTVDVVIDGTYT 260
G+W + ++ + DAGGE + S ++ S D E++ ++ ++ +
Sbjct: 243 GMWYVSGGRSWPALLIRDAGGEYLWSEVDLPG---SIPIDFEKV------LERALNSDFW 293
Query: 261 LEPANYTQSTFLENIDAADKSCFAF--LTNQSLWRFDKRNQNSLALDWFDGAVSQPQLVL 318
+ P + L+ D AF + ++ + R + A D++ V +P L+L
Sbjct: 294 INPTTWRN---LDEGRGQDSRYTAFRPFREKKVYNNNARINGAGANDYYQQGVMRPDLIL 350
Query: 319 ADLTEALFPT--GNYTITYFRNIAKGEG 344
ADL PT N+ + ++R + +G G
Sbjct: 351 ADLISIFHPTLLPNHELYFYRLLEEGTG 378
>gi|333031307|ref|ZP_08459368.1| periplasmic binding protein [Bacteroides coprosuis DSM 18011]
gi|332741904|gb|EGJ72386.1| periplasmic binding protein [Bacteroides coprosuis DSM 18011]
Length = 376
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 120/299 (40%), Gaps = 62/299 (20%)
Query: 75 LLGLLSSMKGMTS----------ESVASGCVLKLYQGGEIGLVNKSEPLQFSQYAAHFTT 124
LLG L +KG+ + E V SG V L G L +E L FTT
Sbjct: 105 LLGELDKVKGVCNAKYVYNPYILEGVESGTVKDL--GDSFNL--DTEQLLMLNPQIIFTT 160
Query: 125 --DSDQPQACNFANF-------APFGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKEN 175
+ DQ +A + E L RAEWIKF+G F N A+A+ ++N ++ N
Sbjct: 161 AYNGDQKEAETLKRLNQNPIFNLEWQESSLLGRAEWIKFIGAFFNKSAQADSIFNDIEAN 220
Query: 176 YLCLTRVAAGKTKPFKPIVAWMEFYNGVWSFT----------KEAFKLKYVED--AGGEN 223
YL ++ ++ KP + + + G WS K+A Y ED A +
Sbjct: 221 YLTAKQIVNHVSE--KPSILSGQDFRGTWSLPSGNSYAAQLFKDAKVAYYYEDEVAHQGS 278
Query: 224 VDSSINKMTYNISNSDDLEQLHAILCTVDVVIDGTYTLEPANYTQSTFLENIDAADK-SC 282
+ SSI + N+D V+V LE N DK
Sbjct: 279 IPSSIEEAMVYFHNAD---------LWVNVQAKSLEELEQNN-------------DKYKL 316
Query: 283 FAFLTNQSLWRFDKRNQNSLALDWFDGAVSQPQLVLADLTEALFPT--GNYTITYFRNI 339
F +++ +KR+ D+++ V++P L+L DL + P+ Y +TY R +
Sbjct: 317 FKAFKEGNVYSNNKRSHAEGGNDYWESGVARPDLLLKDLIKVAHPSLLPEYELTYMRKL 375
>gi|427731582|ref|YP_007077819.1| Fe3+-hydroxamate ABC transporter substrate-binding protein [Nostoc
sp. PCC 7524]
gi|427367501|gb|AFY50222.1| ABC-type Fe3+-hydroxamate transport system, periplasmic component
[Nostoc sp. PCC 7524]
Length = 402
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 101/214 (47%), Gaps = 28/214 (13%)
Query: 138 APFGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAA-GKTKPFKPIVAW 196
A + ED PL R+EW+KF +F N EA+A +++N + Y T +AA + +P V
Sbjct: 207 AEYMEDTPLGRSEWLKFTALFFNQEAKAEKIFNQIANRY---TEIAAKAQAVKNRPSVFV 263
Query: 197 MEFYNGVWSFTK-EAFKLKYVEDAGGENVDSSINKMTYNISNSDDLEQLHAILCTVDVVI 255
+ G W ++ KY+ DAGG N SDD ++ + +VV+
Sbjct: 264 GFNFKGTWFMPGGNSYVAKYLADAGG------------NYLWSDDKSN-GSLPLSFEVVL 310
Query: 256 D----GTYTLEPANYTQSTFLENIDAADKSC--FAFLTNQSLWRFDKRNQNSLALDWFDG 309
+ Y L + QS ++++ A D F + +L+ + R + D+++G
Sbjct: 311 ERAANADYWLNFSQGWQS--MKDLIADDNRYGDFQAVKIGNLYNNNGRVNANGGNDYWEG 368
Query: 310 AVSQPQLVLADLTEALFPT--GNYTITYFRNIAK 341
+S P +VLADL + L P + + Y+R +K
Sbjct: 369 GISNPDIVLADLIKILHPEILPKHQLFYYRKFSK 402
>gi|299116544|emb|CBN74732.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 506
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 93/389 (23%), Positives = 149/389 (38%), Gaps = 79/389 (20%)
Query: 4 DISKVEDAQNFHIYYGQTFKV--IKNAIDGRSYLLIQNNSRMAARTKYCTARIKSFV-IP 60
D + +E A+ F + Y T+KV + + Y+L Q + + T ++ ++ IP
Sbjct: 71 DKAVIEYAETFTVDYLPTYKVLTVSDGFSDTVYVLYQCGTPVPDLDD--TTVVQQYISIP 128
Query: 61 MSNYSVDT-DFFPG-KLLGLLSSMKGMTSES--VASGCVLKLYQGGEI------------ 104
+SN S T D P +LLG S+ T + S CV +L G +
Sbjct: 129 VSNVSTGTTDHVPRIELLGHRDSIVAYTGNVGLIGSPCVDELVDNGTVVQALTFDTVCGQ 188
Query: 105 ------GLVNKSEPLQFSQYAAHFTTDSDQPQACNFAN------FAPFGEDGPLRRAEWI 152
LVN S + F T S P A N + GE L RAE I
Sbjct: 189 DIIDNEALVNASVEVAFGDS----LTTSWCPNATMVHNGVAVVSYLESGEAVGLGRAEAI 244
Query: 153 KFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPF--KPIVAWMEFY---------- 200
K +F N EARAN++++ ++ + C A G + P VAW F
Sbjct: 245 KLFSLFYNEEARANELFDEIETVWFCTKTNAQGCSLELDESPTVAWFPFLPTDQDSLYYE 304
Query: 201 --NGVWSFTKEAFKLKYVEDAGGENVDSSINK--MTYNISNSDDLEQLHAILCTVDVVID 256
+G T +++ + V D GG +D + + MT E++ A D+ +
Sbjct: 305 AGSGWGEPTLDSYYGQAVNDTGGTMLDCGVVEGLMTD--------EEMLACFADADICV- 355
Query: 257 GTYTLEPANYTQSTFLENIDAADKSCFAFLTNQSLWRFDKRNQNSLALDWFDGAVSQPQL 316
A+Y + DA S + NQ+ + N+ WF+ +P +
Sbjct: 356 -----FAADYGEVELF--FDADVLSQLRCIQNQTAYDVTLSGINA----WFEAIWVEPHV 404
Query: 317 VLADLTEAL------FPTGNYTITYFRNI 339
++ D+ L F G Y RN+
Sbjct: 405 LMQDMVSVLHGDGVNFGIGEYERLLLRNV 433
>gi|365960069|ref|YP_004941636.1| iron ABC transporter [Flavobacterium columnare ATCC 49512]
gi|365736750|gb|AEW85843.1| iron ABC transporter [Flavobacterium columnare ATCC 49512]
Length = 379
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 104/244 (42%), Gaps = 30/244 (12%)
Query: 2 PSDISKVEDAQNFHIYYGQTFKVIK------NAIDGRSYLLIQNNSRMAARTKYCTARIK 55
P + + DA F ++ + + VI NA +Y+L ++N + K +
Sbjct: 31 PQKNNILTDATAFTLHEYENYSVITVTTPWPNAQKPFTYVLTKSNKNIPDSLK----QYL 86
Query: 56 SFVIPMSNYSVD--TDFFPGKLLGLLSSMKGMT-SESVASGCVLKLYQGGEIGLVNKSEP 112
+P+ N V T+ ++LG+ + + G ++ ++S KL G I + ++E
Sbjct: 87 QIQVPLKNLVVTSTTNIPFLEILGVENKLVGFPHTDYISSDKTRKLIDSGRIKNLGENEK 146
Query: 113 LQFSQYA-------AHFTTDSDQP--QACNFANF-----APFGEDGPLRRAEWIKFLGIF 158
+ Q F D + P A A A + E PL +AEWIKF G
Sbjct: 147 INIEQLINLAPNALVAFGVDGNNPTLNAIEKAGIPVLIQADWMEQTPLGKAEWIKFFGAL 206
Query: 159 ANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEFYNGVWSFTK-EAFKLKYVE 217
E A ++ VK+NYL + KT KP + + Y W K +++K Y++
Sbjct: 207 VGKEKEAKNYFDLVKKNYLNALEIV--KTVQQKPTILYGTMYQDQWYMPKGDSWKSTYIQ 264
Query: 218 DAGG 221
DAGG
Sbjct: 265 DAGG 268
>gi|148657194|ref|YP_001277399.1| periplasmic binding protein [Roseiflexus sp. RS-1]
gi|148569304|gb|ABQ91449.1| periplasmic binding protein [Roseiflexus sp. RS-1]
Length = 434
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 87/194 (44%), Gaps = 23/194 (11%)
Query: 140 FGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEF 199
+ E PL RAEWIKF F N EA+A +VYN + Y + A + +P V
Sbjct: 242 YMETSPLGRAEWIKFTAAFFNREAKATEVYNTIVSRYKEI--AAKARNVATRPTVFGDAP 299
Query: 200 YNGVWSFT-KEAFKLKYVEDAGGENV---DSSINKMTYNISNSDDLEQLHAILCTVDVVI 255
+ G W ++ + + DAG + + D+S +S + E+
Sbjct: 300 FQGTWYMPGGRSYVAQLLADAGADYLWADDTSTGSQP--LSFEEVFERAR---------- 347
Query: 256 DGTYTLEPANYTQSTFLENIDAADK--SCFAFLTNQSLWRFDKRNQNSLALDWFDGAVSQ 313
+ + L P ++ L I AAD+ + FA N +++ +KR + D+++ V+
Sbjct: 348 NADFWLNPGSWKS---LSEIKAADERLTGFAAFQNGNVFNNNKRLNENGGNDYWETGVTN 404
Query: 314 PQLVLADLTEALFP 327
P LVLADL + P
Sbjct: 405 PHLVLADLIKIFHP 418
>gi|163845908|ref|YP_001633952.1| periplasmic binding protein [Chloroflexus aurantiacus J-10-fl]
gi|222523630|ref|YP_002568100.1| periplasmic binding protein [Chloroflexus sp. Y-400-fl]
gi|163667197|gb|ABY33563.1| periplasmic binding protein [Chloroflexus aurantiacus J-10-fl]
gi|222447509|gb|ACM51775.1| periplasmic binding protein [Chloroflexus sp. Y-400-fl]
Length = 435
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 82/350 (23%), Positives = 142/350 (40%), Gaps = 51/350 (14%)
Query: 8 VEDAQNFHIYYGQTFKVI------KNAIDGRSYLLIQNNSRM--AARTKYCTARIKSFVI 59
+ DA + I Y +KVI +NA Y+L+Q + A+ VI
Sbjct: 91 LSDATGWTIEYFNHYKVITVLNPWRNADTQFQYILVQCGTPPPPASDNALIIEIPVQRVI 150
Query: 60 PMSNYSVDTDFFPGKLLGLLSSMKGMTS----------ESVASGCVLKLYQGGEIGLVNK 109
MS + G LG+L + G+ S + + +G ++++ GG++ +
Sbjct: 151 AMS--TTQLPHLDG--LGVLDKLIGVDSFLYINNEAVRKKIDAGELVEIGSGGQVNVEQA 206
Query: 110 S--EPLQFSQYAAHFTTDSDQPQ----ACNFANFAPFGEDGPLRRAEWIKFLGIFANAEA 163
EP Y P+ N + + E PL RAEWIKF F N EA
Sbjct: 207 LDLEPDLIMTYGVGNPEYDAHPKLLEAGLNVVLNSEYMEGSPLGRAEWIKFTAAFFNQEA 266
Query: 164 RANQVYNAVKENYLCLTRVAAGKTKPF--KPIVAWMEFYNGVWSFT-KEAFKLKYVEDAG 220
+AN++Y A+ + Y R A K + KP V + G W +++ + + DAG
Sbjct: 267 KANELYTAIAQRY----RDIAAKARAVAEKPTVFANAPFRGTWYMPGGKSYVAQLLADAG 322
Query: 221 GENV---DSSINKMTYNISNSDDLEQLHAILCTVDVVIDGTYTLEPANYTQSTFLENIDA 277
+ D+S + + Q + ++ L P + + L+ +D
Sbjct: 323 ANYLWADDTSSGSQQLSFEEVFERAQ------------NASFWLNPGSAKSLSELQQMD- 369
Query: 278 ADKSCFAFLTNQSLWRFDKRNQNSLALDWFDGAVSQPQLVLADLTEALFP 327
+ FA N +++ +KR + D+++ V+ P L+LADL + P
Sbjct: 370 ERFTQFAAFQNGAVFNNNKRLNENGGNDYWETGVTNPHLILADLIKIFHP 419
>gi|312138604|ref|YP_004005940.1| ABC transporter substrate-binding protein [Rhodococcus equi 103S]
gi|311887943|emb|CBH47255.1| putative ABC transporter substrate binding lipoprotein [Rhodococcus
equi 103S]
Length = 395
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 88/361 (24%), Positives = 141/361 (39%), Gaps = 44/361 (12%)
Query: 4 DISKVEDAQNFHIYYGQTFKVIKNAIDGR---SYLLIQNNSRMAARTKYCTARIKSFVIP 60
D VE A+NF I Y Q+++V+ G+ SY+L + + T A + P
Sbjct: 53 DKQTVEYAENFDIEYHQSYQVVTVRQPGQADESYVLTRCGAPAPELTGDL-AGAQQVTTP 111
Query: 61 MSN-YSVDTDFFPG-KLLGLLSSMKGMTSES----------VASGCVLKLYQGGEIGL-- 106
+++ ++ T P + LG L + G S +A V + G++
Sbjct: 112 VTSLFAESTTHLPSLEALGKLDVLTGFASADYVYSEAARAHIADDGVTQFATAGQVDAEA 171
Query: 107 VNKSEPLQF-----SQYAAHFTTDSDQPQACNFANFAPFGEDGPLRRAEWIKFLGIFANA 161
V P F + A S P N+ + E PL RAEWIKF
Sbjct: 172 VVAQAPQAFVTGGFTDPAFAVIERSKIPVLDNY----DWLETDPLGRAEWIKFFAALTGT 227
Query: 162 EARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEFYNGVWSFTKEAFKLKYVEDAGG 221
E +A + ++ + Y T +AA PIV + Y G WS ++
Sbjct: 228 EQQATETFDGIVSEYGKYTTLAANVAD--APIVPGLP-YQGAWSVPLASYS--------- 275
Query: 222 ENVDSSINKMTYNISNSDDLEQLHAILCTVDVVIDGTYTLEPANYTQSTFLENIDAADK- 280
N S ++T+ + L L TV G + L + + T E I A +
Sbjct: 276 -NDLYSTARITHPWMSEPGTGSLQTDLETV-FAKAGGFPLAISTSSNRTKAEAIAAEPRL 333
Query: 281 SCFAFLTNQSLWRFDKRNQNSLALDWFDGAVSQPQLVLADLTEALFP--TGNYTITYFRN 338
+ FA + +W R ++ ALD ++ V +P LVLADL P + T++R
Sbjct: 334 AEFAAFRDGQVWTSSARMTDAGALDIYEQGVLRPDLVLADLIAIAHPDLLPGHEFTFYRR 393
Query: 339 I 339
+
Sbjct: 394 L 394
>gi|282853154|ref|ZP_06262491.1| periplasmic binding protein [Propionibacterium acnes J139]
gi|282582607|gb|EFB87987.1| periplasmic binding protein [Propionibacterium acnes J139]
Length = 422
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 90/203 (44%), Gaps = 11/203 (5%)
Query: 142 EDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEFYN 201
E PL RAEW+K GI N E A + ++++ E Y + + A KP V +
Sbjct: 227 ESTPLARAEWMKAYGILLNKEGAATKSFDSIAERYAEVAKKAKNAAD--KPSVLVGQETK 284
Query: 202 GVWSFT-KEAFKLKYVEDAGGENVDSSINKMTYNISNSDDLEQLHAILCTVDVVIDGTY- 259
G W +++ +K++ DAG +V + K N + D E + D ++G+Y
Sbjct: 285 GQWYVPGADSYMIKFMTDAGASDVMAQAVKG--NGATPTDAEVVFKYGSKADFWLNGSYM 342
Query: 260 TLEPANYTQSTFLENIDAADKSCFAFLTNQSLWRFDKRNQNSLALDWFDGAVSQPQLVLA 319
++ + +N A+ S F + ++W KR D++ + QP +VLA
Sbjct: 343 SMTTWHGKDDALKQNPRYANLSAF---QHGNVWNPSKRTAPDTGNDFWQSGIVQPDVVLA 399
Query: 320 DLTEALFP--TGNYTITYFRNIA 340
DLT P YT Y+ ++
Sbjct: 400 DLTYIFHPDLMKGYTPYYYTKLS 422
>gi|411116244|ref|ZP_11388732.1| ABC-type Fe3+-hydroxamate transport system, periplasmic component
[Oscillatoriales cyanobacterium JSC-12]
gi|410713735|gb|EKQ71235.1| ABC-type Fe3+-hydroxamate transport system, periplasmic component
[Oscillatoriales cyanobacterium JSC-12]
Length = 398
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 82/368 (22%), Positives = 151/368 (41%), Gaps = 54/368 (14%)
Query: 7 KVEDAQNFHIYYGQTFKVI------KNAIDGRSYLLIQNNSRMAARTK---YCTARIKSF 57
++ DAQ F + Y + +KV+ K + Y+L+Q + K ++S
Sbjct: 52 RITDAQGFTVDYHKHYKVVSVNRPWKESKAQFQYVLVQCGTPTPEGFKPEQIVQVPVRS- 110
Query: 58 VIPMSNYSVDTDFFPGKLLGLLSSMKGMTS-ESVASGCVLKLYQGGEIGLVNKSEPLQFS 116
VI +S T F P + LG+L + G+++ + V + VL+ Q ++ V + L+
Sbjct: 111 VISLST----THFVPLQRLGVLDRLIGISNFKDVTTPAVLEKIQKTQLTEVGNAGSLKLE 166
Query: 117 Q-----------YAAHFTTDSDQPQ----ACNFANFAPFGEDGPLRRAEWIKFLGIFANA 161
+ Y P+ A A + E PL +AEW+KFL +F N
Sbjct: 167 KILELSPDLVTTYGTGNPQTDTHPKLLEAGVKVAIVAEYMESTPLGQAEWMKFLALFFNR 226
Query: 162 EARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEFYNGVW-SFTKEAFKLKYVEDAG 220
EA A + + +++ Y + A KT +P V G W + +++ K++ DAG
Sbjct: 227 EAEAEKSFAEIRQRYQAIA--AKTKTVKRRPTVFSGFDRKGTWYAPGGDSYVAKFLADAG 284
Query: 221 GENV---DSSINKMTYNISNSDDLEQLHAILCTVDVVIDGTYTLEPANYTQSTFLENIDA 277
+ D S + EQ++ I ++++ T+S L A
Sbjct: 285 ANYLWSDDRSPGSLQLT------FEQVYDRAAQAQYWIVNAHSVK----TRSDLL----A 330
Query: 278 ADK--SCFAFLTNQSLWRFDKRNQNSLALDWFDGAVSQPQLVLADLTEALFP--TGNYTI 333
AD FA L +++ + D++ ++ P ++LADL + P +
Sbjct: 331 ADPRYQGFAALQANNVFSPTAKVNAQGGNDYWQSGIANPDIILADLVKIFHPELVPGHQF 390
Query: 334 TYFRNIAK 341
Y+R + +
Sbjct: 391 VYYRQLPQ 398
>gi|422437017|ref|ZP_16513864.1| periplasmic binding protein [Propionibacterium acnes HL092PA1]
gi|422523370|ref|ZP_16599382.1| periplasmic binding protein [Propionibacterium acnes HL053PA2]
gi|422531685|ref|ZP_16607633.1| periplasmic binding protein [Propionibacterium acnes HL110PA1]
gi|313792787|gb|EFS40868.1| periplasmic binding protein [Propionibacterium acnes HL110PA1]
gi|315078934|gb|EFT50952.1| periplasmic binding protein [Propionibacterium acnes HL053PA2]
gi|327457295|gb|EGF03950.1| periplasmic binding protein [Propionibacterium acnes HL092PA1]
Length = 370
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 89/203 (43%), Gaps = 11/203 (5%)
Query: 142 EDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEFYN 201
E PL RAEW+K GI N E A + ++++ E Y + + A KP V +
Sbjct: 175 ESTPLARAEWMKAYGILLNKEGAATKSFDSIAERYAEVAKKAKNAAD--KPSVLVGQETK 232
Query: 202 GVWSFT-KEAFKLKYVEDAGGENVDSSINKMTYNISNSDDLEQLHAILCTVDVVIDGTY- 259
G W +++ +K++ DAG +V + K N + D E + D ++G Y
Sbjct: 233 GQWYVPGADSYMIKFMTDAGASDVMAQAVKG--NGATPTDAEVIFKYGSKADFWLNGNYM 290
Query: 260 TLEPANYTQSTFLENIDAADKSCFAFLTNQSLWRFDKRNQNSLALDWFDGAVSQPQLVLA 319
++ + +N A+ S F + ++W KR D++ + QP +VLA
Sbjct: 291 SMTTWHGKDDALKQNPRYANLSAF---QHGNVWNPSKRTAPDTGNDFWQSGIVQPDVVLA 347
Query: 320 DLTEALFP--TGNYTITYFRNIA 340
DLT P YT Y+ ++
Sbjct: 348 DLTYIFHPDLMKGYTPYYYTKLS 370
>gi|422514692|ref|ZP_16590810.1| periplasmic binding protein [Propionibacterium acnes HL110PA2]
gi|313803450|gb|EFS44632.1| periplasmic binding protein [Propionibacterium acnes HL110PA2]
Length = 370
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 89/203 (43%), Gaps = 11/203 (5%)
Query: 142 EDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEFYN 201
E PL RAEW+K GI N E A + ++++ E Y + + A KP V +
Sbjct: 175 ESTPLARAEWMKAYGILLNKEGAATKSFDSIAERYAEVAKKAKNAAD--KPSVLVGQETK 232
Query: 202 GVWSFT-KEAFKLKYVEDAGGENVDSSINKMTYNISNSDDLEQLHAILCTVDVVIDGTY- 259
G W +++ +K++ DAG +V + K N + D E + D ++G Y
Sbjct: 233 GQWYVPGADSYMIKFMTDAGASDVMAQAVKG--NGATPTDAEVIFKYGSKADFWLNGNYM 290
Query: 260 TLEPANYTQSTFLENIDAADKSCFAFLTNQSLWRFDKRNQNSLALDWFDGAVSQPQLVLA 319
++ + +N A+ S F + ++W KR D++ + QP +VLA
Sbjct: 291 SMTTWHGKDDALKQNPRYANLSAF---QHGNVWNPSKRTAPDTGNDFWQSGIVQPDVVLA 347
Query: 320 DLTEALFP--TGNYTITYFRNIA 340
DLT P YT Y+ ++
Sbjct: 348 DLTYIFHPDLMKGYTPYYYTKLS 370
>gi|342211639|ref|ZP_08704364.1| periplasmic-binding protein [Propionibacterium sp. CC003-HC2]
gi|386070645|ref|YP_005985541.1| periplasmic-binding protein [Propionibacterium acnes ATCC 11828]
gi|422389532|ref|ZP_16469629.1| periplasmic-binding protein [Propionibacterium acnes HL103PA1]
gi|422394773|ref|ZP_16474814.1| periplasmic-binding protein [Propionibacterium acnes HL097PA1]
gi|422426848|ref|ZP_16503766.1| periplasmic binding protein [Propionibacterium acnes HL087PA1]
gi|422432242|ref|ZP_16509112.1| periplasmic binding protein [Propionibacterium acnes HL059PA2]
gi|422434732|ref|ZP_16511590.1| periplasmic binding protein [Propionibacterium acnes HL083PA2]
gi|422442458|ref|ZP_16519261.1| periplasmic binding protein [Propionibacterium acnes HL002PA1]
gi|422446244|ref|ZP_16522989.1| periplasmic binding protein [Propionibacterium acnes HL027PA1]
gi|422450416|ref|ZP_16527133.1| periplasmic binding protein [Propionibacterium acnes HL030PA2]
gi|422452890|ref|ZP_16529586.1| periplasmic binding protein [Propionibacterium acnes HL087PA3]
gi|422455376|ref|ZP_16532046.1| periplasmic binding protein [Propionibacterium acnes HL030PA1]
gi|422457885|ref|ZP_16534543.1| periplasmic binding protein [Propionibacterium acnes HL050PA2]
gi|422463556|ref|ZP_16540169.1| periplasmic binding protein [Propionibacterium acnes HL060PA1]
gi|422466699|ref|ZP_16543261.1| periplasmic binding protein [Propionibacterium acnes HL110PA4]
gi|422468429|ref|ZP_16544960.1| periplasmic binding protein [Propionibacterium acnes HL110PA3]
gi|422494543|ref|ZP_16570838.1| periplasmic binding protein [Propionibacterium acnes HL025PA1]
gi|422500042|ref|ZP_16576298.1| periplasmic binding protein [Propionibacterium acnes HL063PA2]
gi|422511176|ref|ZP_16587319.1| periplasmic binding protein [Propionibacterium acnes HL059PA1]
gi|422538701|ref|ZP_16614575.1| periplasmic binding protein [Propionibacterium acnes HL013PA1]
gi|422541488|ref|ZP_16617346.1| periplasmic binding protein [Propionibacterium acnes HL037PA1]
gi|422546156|ref|ZP_16621983.1| periplasmic binding protein [Propionibacterium acnes HL050PA3]
gi|422550575|ref|ZP_16626372.1| periplasmic binding protein [Propionibacterium acnes HL050PA1]
gi|422556924|ref|ZP_16632671.1| periplasmic binding protein [Propionibacterium acnes HL025PA2]
gi|422562150|ref|ZP_16637828.1| periplasmic binding protein [Propionibacterium acnes HL046PA1]
gi|422565872|ref|ZP_16641511.1| periplasmic binding protein [Propionibacterium acnes HL082PA2]
gi|422570865|ref|ZP_16646460.1| periplasmic binding protein [Propionibacterium acnes HL067PA1]
gi|422576655|ref|ZP_16652192.1| periplasmic binding protein [Propionibacterium acnes HL001PA1]
gi|422577896|ref|ZP_16653425.1| periplasmic binding protein [Propionibacterium acnes HL005PA4]
gi|313764901|gb|EFS36265.1| periplasmic binding protein [Propionibacterium acnes HL013PA1]
gi|313814105|gb|EFS51819.1| periplasmic binding protein [Propionibacterium acnes HL025PA1]
gi|313815537|gb|EFS53251.1| periplasmic binding protein [Propionibacterium acnes HL059PA1]
gi|313828876|gb|EFS66590.1| periplasmic binding protein [Propionibacterium acnes HL063PA2]
gi|314916334|gb|EFS80165.1| periplasmic binding protein [Propionibacterium acnes HL005PA4]
gi|314917332|gb|EFS81163.1| periplasmic binding protein [Propionibacterium acnes HL050PA1]
gi|314921936|gb|EFS85767.1| periplasmic binding protein [Propionibacterium acnes HL050PA3]
gi|314922614|gb|EFS86445.1| periplasmic binding protein [Propionibacterium acnes HL001PA1]
gi|314930799|gb|EFS94630.1| periplasmic binding protein [Propionibacterium acnes HL067PA1]
gi|314955275|gb|EFS99680.1| periplasmic binding protein [Propionibacterium acnes HL027PA1]
gi|314959277|gb|EFT03379.1| periplasmic binding protein [Propionibacterium acnes HL002PA1]
gi|314965515|gb|EFT09614.1| periplasmic binding protein [Propionibacterium acnes HL082PA2]
gi|314969271|gb|EFT13369.1| periplasmic binding protein [Propionibacterium acnes HL037PA1]
gi|314982673|gb|EFT26765.1| periplasmic binding protein [Propionibacterium acnes HL110PA3]
gi|315091332|gb|EFT63308.1| periplasmic binding protein [Propionibacterium acnes HL110PA4]
gi|315094566|gb|EFT66542.1| periplasmic binding protein [Propionibacterium acnes HL060PA1]
gi|315099650|gb|EFT71626.1| periplasmic binding protein [Propionibacterium acnes HL059PA2]
gi|315102118|gb|EFT74094.1| periplasmic binding protein [Propionibacterium acnes HL046PA1]
gi|315104986|gb|EFT76962.1| periplasmic binding protein [Propionibacterium acnes HL050PA2]
gi|315107603|gb|EFT79579.1| periplasmic binding protein [Propionibacterium acnes HL030PA1]
gi|315110011|gb|EFT81987.1| periplasmic binding protein [Propionibacterium acnes HL030PA2]
gi|327329059|gb|EGE70819.1| periplasmic-binding protein [Propionibacterium acnes HL103PA1]
gi|327334671|gb|EGE76382.1| periplasmic-binding protein [Propionibacterium acnes HL097PA1]
gi|327454368|gb|EGF01023.1| periplasmic binding protein [Propionibacterium acnes HL087PA3]
gi|327456434|gb|EGF03089.1| periplasmic binding protein [Propionibacterium acnes HL083PA2]
gi|328756127|gb|EGF69743.1| periplasmic binding protein [Propionibacterium acnes HL087PA1]
gi|328758506|gb|EGF72122.1| periplasmic binding protein [Propionibacterium acnes HL025PA2]
gi|340767183|gb|EGR89708.1| periplasmic-binding protein [Propionibacterium sp. CC003-HC2]
gi|353455011|gb|AER05530.1| periplasmic-binding protein [Propionibacterium acnes ATCC 11828]
Length = 370
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 89/203 (43%), Gaps = 11/203 (5%)
Query: 142 EDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEFYN 201
E PL RAEW+K GI N E A + ++++ E Y + + A KP V +
Sbjct: 175 ESTPLARAEWMKAYGILLNKEGAATKSFDSIAERYAEVAKKAKNAAD--KPSVLVGQETK 232
Query: 202 GVWSFT-KEAFKLKYVEDAGGENVDSSINKMTYNISNSDDLEQLHAILCTVDVVIDGTY- 259
G W +++ +K++ DAG +V + K N + D E + D ++G Y
Sbjct: 233 GQWYVPGADSYMIKFMTDAGASDVMAQAVKG--NGATPTDAEVVFKYGSKADFWLNGNYM 290
Query: 260 TLEPANYTQSTFLENIDAADKSCFAFLTNQSLWRFDKRNQNSLALDWFDGAVSQPQLVLA 319
++ + +N A+ S F + ++W KR D++ + QP +VLA
Sbjct: 291 SMTTWHGKDDALKQNPRYANLSAF---QHGNVWNPSKRTAPDTGNDFWQSGIVQPDVVLA 347
Query: 320 DLTEALFP--TGNYTITYFRNIA 340
DLT P YT Y+ ++
Sbjct: 348 DLTYIFHPDLMKGYTPYYYTKLS 370
>gi|289424368|ref|ZP_06426151.1| periplasmic binding protein [Propionibacterium acnes SK187]
gi|289155065|gb|EFD03747.1| periplasmic binding protein [Propionibacterium acnes SK187]
Length = 422
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 89/203 (43%), Gaps = 11/203 (5%)
Query: 142 EDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEFYN 201
E PL RAEW+K GI N E A + ++++ E Y + + A KP V +
Sbjct: 227 ESTPLARAEWMKAYGILLNKEGAATKSFDSIAERYAEVAKKAKNAAD--KPSVLVGQETK 284
Query: 202 GVWSFT-KEAFKLKYVEDAGGENVDSSINKMTYNISNSDDLEQLHAILCTVDVVIDGTY- 259
G W +++ +K++ DAG +V + K N + D E + D ++G Y
Sbjct: 285 GQWYVPGADSYMIKFMTDAGASDVMAQAVKG--NGATPTDAEVVFKYGSKADFWLNGNYM 342
Query: 260 TLEPANYTQSTFLENIDAADKSCFAFLTNQSLWRFDKRNQNSLALDWFDGAVSQPQLVLA 319
++ + +N A+ S F + ++W KR D++ + QP +VLA
Sbjct: 343 SMTTWHGKDDALKQNPRYANLSAF---KHGNVWNPSKRTAPDTGNDFWQSGIVQPDVVLA 399
Query: 320 DLTEALFP--TGNYTITYFRNIA 340
DLT P YT Y+ ++
Sbjct: 400 DLTYIFHPDLMKGYTPYYYTKLS 422
>gi|422488007|ref|ZP_16564338.1| periplasmic binding protein [Propionibacterium acnes HL013PA2]
gi|327444744|gb|EGE91398.1| periplasmic binding protein [Propionibacterium acnes HL013PA2]
Length = 416
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 89/203 (43%), Gaps = 11/203 (5%)
Query: 142 EDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEFYN 201
E PL RAEW+K GI N E A + ++++ E Y + + A KP V +
Sbjct: 221 ESTPLARAEWMKAYGILLNKEGAATKSFDSIAERYAEVAKKAKNAAD--KPSVLVGQETK 278
Query: 202 GVWSFT-KEAFKLKYVEDAGGENVDSSINKMTYNISNSDDLEQLHAILCTVDVVIDGTY- 259
G W +++ +K++ DAG +V + K N + D E + D ++G Y
Sbjct: 279 GQWYVPGADSYMIKFMTDAGASDVMAQAVKG--NGATPTDAEVVFKYGSKADFWLNGNYM 336
Query: 260 TLEPANYTQSTFLENIDAADKSCFAFLTNQSLWRFDKRNQNSLALDWFDGAVSQPQLVLA 319
++ + +N A+ S F + ++W KR D++ + QP +VLA
Sbjct: 337 SMTTWHGKDDALKQNPRYANLSAF---KHGNVWNPSKRTAPDTGNDFWQSGIVQPDVVLA 393
Query: 320 DLTEALFP--TGNYTITYFRNIA 340
DLT P YT Y+ ++
Sbjct: 394 DLTYIFHPDLMKGYTPYYYTKLS 416
>gi|50841598|ref|YP_054825.1| periplasmic-binding protein [Propionibacterium acnes KPA171202]
gi|365973022|ref|YP_004954581.1| periplasmic-binding protein [Propionibacterium acnes TypeIA2
P.acn33]
gi|419420337|ref|ZP_13960566.1| periplasmic-binding protein [Propionibacterium acnes PRP-38]
gi|50839200|gb|AAT81867.1| periplasmic-binding protein [Propionibacterium acnes KPA171202]
gi|365743021|gb|AEW78218.1| periplasmic-binding protein [Propionibacterium acnes TypeIA2
P.acn33]
gi|379978711|gb|EIA12035.1| periplasmic-binding protein [Propionibacterium acnes PRP-38]
Length = 422
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 89/203 (43%), Gaps = 11/203 (5%)
Query: 142 EDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEFYN 201
E PL RAEW+K GI N E A + ++++ E Y + + A KP V +
Sbjct: 227 ESTPLARAEWMKAYGILLNKEGAATKSFDSIAERYAEVAKKAKNAAD--KPSVLVGQETK 284
Query: 202 GVWSFT-KEAFKLKYVEDAGGENVDSSINKMTYNISNSDDLEQLHAILCTVDVVIDGTY- 259
G W +++ +K++ DAG +V + K N + D E + D ++G Y
Sbjct: 285 GQWYVPGADSYMIKFMTDAGASDVMAQAVKG--NGATPTDAEVVFKYGSKADFWLNGNYM 342
Query: 260 TLEPANYTQSTFLENIDAADKSCFAFLTNQSLWRFDKRNQNSLALDWFDGAVSQPQLVLA 319
++ + +N A+ S F + ++W KR D++ + QP +VLA
Sbjct: 343 SMTTWHGKDDALKQNPRYANLSAF---QHGNVWNPSKRTAPDTGNDFWQSGIVQPDVVLA 399
Query: 320 DLTEALFP--TGNYTITYFRNIA 340
DLT P YT Y+ ++
Sbjct: 400 DLTYIFHPDLMKGYTPYYYTKLS 422
>gi|289427321|ref|ZP_06429034.1| periplasmic binding protein [Propionibacterium acnes J165]
gi|386023052|ref|YP_005941355.1| periplasmic binding protein [Propionibacterium acnes 266]
gi|289159251|gb|EFD07442.1| periplasmic binding protein [Propionibacterium acnes J165]
gi|332674508|gb|AEE71324.1| periplasmic binding protein [Propionibacterium acnes 266]
gi|456740607|gb|EMF65119.1| periplasmic binding protein [Propionibacterium acnes FZ1/2/0]
Length = 422
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 89/203 (43%), Gaps = 11/203 (5%)
Query: 142 EDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEFYN 201
E PL RAEW+K GI N E A + ++++ E Y + + A KP V +
Sbjct: 227 ESTPLARAEWMKAYGILLNKEGAATKSFDSIAERYAEVAKKAKNAAD--KPSVLVGQETK 284
Query: 202 GVWSFT-KEAFKLKYVEDAGGENVDSSINKMTYNISNSDDLEQLHAILCTVDVVIDGTY- 259
G W +++ +K++ DAG +V + K N + D E + D ++G Y
Sbjct: 285 GQWYVPGADSYMIKFMTDAGASDVMAQAVKG--NGATPTDAEVVFKYGSKADFWLNGNYM 342
Query: 260 TLEPANYTQSTFLENIDAADKSCFAFLTNQSLWRFDKRNQNSLALDWFDGAVSQPQLVLA 319
++ + +N A+ S F + ++W KR D++ + QP +VLA
Sbjct: 343 SMTTWHGKDDALKQNPRYANLSAF---KHGNVWNPSKRTAPDTGNDFWQSGIVQPDVVLA 399
Query: 320 DLTEALFP--TGNYTITYFRNIA 340
DLT P YT Y+ ++
Sbjct: 400 DLTYIFHPDLMKGYTPYYYTKLS 422
>gi|354606035|ref|ZP_09024008.1| hypothetical protein HMPREF1003_00575 [Propionibacterium sp.
5_U_42AFAA]
gi|353558173|gb|EHC27539.1| hypothetical protein HMPREF1003_00575 [Propionibacterium sp.
5_U_42AFAA]
Length = 422
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 89/203 (43%), Gaps = 11/203 (5%)
Query: 142 EDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEFYN 201
E PL RAEW+K GI N E A + ++++ E Y + + A KP V +
Sbjct: 227 ESTPLARAEWMKAYGILLNKEGAATKSFDSIAERYAEVAKKAKNAAD--KPSVLVGQETK 284
Query: 202 GVWSFT-KEAFKLKYVEDAGGENVDSSINKMTYNISNSDDLEQLHAILCTVDVVIDGTY- 259
G W +++ +K++ DAG +V + K N + D E + D ++G Y
Sbjct: 285 GQWYVPGADSYMIKFMTDAGASDVMAQAVKG--NGATPTDAEVVFKYGSKADFWLNGNYM 342
Query: 260 TLEPANYTQSTFLENIDAADKSCFAFLTNQSLWRFDKRNQNSLALDWFDGAVSQPQLVLA 319
++ + +N A+ S F + ++W KR D++ + QP +VLA
Sbjct: 343 SMTTWHGKDDALKQNPRYANLSAF---KHGNVWNPSKRTAPDTGNDFWQSGIVQPDVVLA 399
Query: 320 DLTEALFP--TGNYTITYFRNIA 340
DLT P YT Y+ ++
Sbjct: 400 DLTYIFHPDLMKGYTPYYYTKLS 422
>gi|422384075|ref|ZP_16464216.1| periplasmic-binding protein [Propionibacterium acnes HL096PA3]
gi|422447879|ref|ZP_16524611.1| periplasmic binding protein [Propionibacterium acnes HL036PA3]
gi|422479320|ref|ZP_16555730.1| periplasmic binding protein [Propionibacterium acnes HL063PA1]
gi|422481924|ref|ZP_16558323.1| periplasmic binding protein [Propionibacterium acnes HL036PA1]
gi|422489447|ref|ZP_16565774.1| periplasmic binding protein [Propionibacterium acnes HL020PA1]
gi|422497618|ref|ZP_16573891.1| periplasmic binding protein [Propionibacterium acnes HL002PA3]
gi|422503834|ref|ZP_16580071.1| periplasmic binding protein [Propionibacterium acnes HL027PA2]
gi|422504544|ref|ZP_16580778.1| periplasmic binding protein [Propionibacterium acnes HL036PA2]
gi|422509016|ref|ZP_16585174.1| periplasmic binding protein [Propionibacterium acnes HL046PA2]
gi|422514011|ref|ZP_16590132.1| periplasmic binding protein [Propionibacterium acnes HL087PA2]
gi|422536221|ref|ZP_16612129.1| periplasmic binding protein [Propionibacterium acnes HL078PA1]
gi|422551534|ref|ZP_16627327.1| periplasmic binding protein [Propionibacterium acnes HL005PA3]
gi|422555022|ref|ZP_16630792.1| periplasmic binding protein [Propionibacterium acnes HL005PA2]
gi|422567363|ref|ZP_16642989.1| periplasmic binding protein [Propionibacterium acnes HL002PA2]
gi|313806977|gb|EFS45475.1| periplasmic binding protein [Propionibacterium acnes HL087PA2]
gi|313817761|gb|EFS55475.1| periplasmic binding protein [Propionibacterium acnes HL046PA2]
gi|313821412|gb|EFS59126.1| periplasmic binding protein [Propionibacterium acnes HL036PA1]
gi|313824642|gb|EFS62356.1| periplasmic binding protein [Propionibacterium acnes HL036PA2]
gi|313826311|gb|EFS64025.1| periplasmic binding protein [Propionibacterium acnes HL063PA1]
gi|314926455|gb|EFS90286.1| periplasmic binding protein [Propionibacterium acnes HL036PA3]
gi|314961449|gb|EFT05550.1| periplasmic binding protein [Propionibacterium acnes HL002PA2]
gi|314986990|gb|EFT31082.1| periplasmic binding protein [Propionibacterium acnes HL005PA2]
gi|314990515|gb|EFT34606.1| periplasmic binding protein [Propionibacterium acnes HL005PA3]
gi|315081622|gb|EFT53598.1| periplasmic binding protein [Propionibacterium acnes HL078PA1]
gi|315082894|gb|EFT54870.1| periplasmic binding protein [Propionibacterium acnes HL027PA2]
gi|315086729|gb|EFT58705.1| periplasmic binding protein [Propionibacterium acnes HL002PA3]
gi|327333793|gb|EGE75510.1| periplasmic-binding protein [Propionibacterium acnes HL096PA3]
gi|328757857|gb|EGF71473.1| periplasmic binding protein [Propionibacterium acnes HL020PA1]
Length = 416
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 89/203 (43%), Gaps = 11/203 (5%)
Query: 142 EDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEFYN 201
E PL RAEW+K GI N E A + ++++ E Y + + A KP V +
Sbjct: 221 ESTPLARAEWMKAYGILLNKEGAATKSFDSIAERYAEVAKKAKNAAD--KPSVLVGQETK 278
Query: 202 GVWSFT-KEAFKLKYVEDAGGENVDSSINKMTYNISNSDDLEQLHAILCTVDVVIDGTY- 259
G W +++ +K++ DAG +V + K N + D E + D ++G Y
Sbjct: 279 GQWYVPGADSYMIKFMTDAGASDVMAQAVKG--NGATPTDAEVVFKYGSKADFWLNGNYM 336
Query: 260 TLEPANYTQSTFLENIDAADKSCFAFLTNQSLWRFDKRNQNSLALDWFDGAVSQPQLVLA 319
++ + +N A+ S F + ++W KR D++ + QP +VLA
Sbjct: 337 SMTTWHGKDDALKQNPRYANLSAF---KHGNVWNPSKRTAPDTGNDFWQSGIVQPDVVLA 393
Query: 320 DLTEALFP--TGNYTITYFRNIA 340
DLT P YT Y+ ++
Sbjct: 394 DLTYIFHPDLMKGYTPYYYTKLS 416
>gi|295129638|ref|YP_003580301.1| periplasmic binding protein [Propionibacterium acnes SK137]
gi|417930536|ref|ZP_12573912.1| periplasmic-binding protein [Propionibacterium acnes SK182]
gi|291376493|gb|ADE00348.1| periplasmic binding protein [Propionibacterium acnes SK137]
gi|340772154|gb|EGR94667.1| periplasmic-binding protein [Propionibacterium acnes SK182]
Length = 422
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 89/203 (43%), Gaps = 11/203 (5%)
Query: 142 EDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEFYN 201
E PL RAEW+K GI N E A + ++++ E Y + + A KP V +
Sbjct: 227 ESTPLARAEWMKAYGILLNKEGAATKSFDSIAERYAEVAKKAKNAAD--KPSVLVGQETK 284
Query: 202 GVWSFT-KEAFKLKYVEDAGGENVDSSINKMTYNISNSDDLEQLHAILCTVDVVIDGTY- 259
G W +++ +K++ DAG +V + K N + D E + D ++G Y
Sbjct: 285 GQWYVPGADSYMIKFMTDAGASDVMAQAVKG--NGATPTDAEVVFKYGSKADFWLNGNYM 342
Query: 260 TLEPANYTQSTFLENIDAADKSCFAFLTNQSLWRFDKRNQNSLALDWFDGAVSQPQLVLA 319
++ + +N A+ S F + ++W KR D++ + QP +VLA
Sbjct: 343 SMTTWHGKDDALKQNPRYANLSAF---KHGNVWNPSKRTAPDTGNDFWQSGIVQPDVVLA 399
Query: 320 DLTEALFP--TGNYTITYFRNIA 340
DLT P YT Y+ ++
Sbjct: 400 DLTYIFHPDLMKGYTPYYYTKLS 422
>gi|335052615|ref|ZP_08545494.1| ABC transporter, substrate-binding protein [Propionibacterium sp.
409-HC1]
gi|335054906|ref|ZP_08547702.1| ABC transporter, substrate-binding protein [Propionibacterium sp.
434-HC2]
gi|365961834|ref|YP_004943400.1| periplasmic-binding protein [Propionibacterium acnes TypeIA2
P.acn31]
gi|365964078|ref|YP_004945643.1| periplasmic-binding protein [Propionibacterium acnes TypeIA2
P.acn17]
gi|333763191|gb|EGL40654.1| ABC transporter, substrate-binding protein [Propionibacterium sp.
409-HC1]
gi|333763263|gb|EGL40723.1| ABC transporter, substrate-binding protein [Propionibacterium sp.
434-HC2]
gi|365738515|gb|AEW82717.1| periplasmic-binding protein [Propionibacterium acnes TypeIA2
P.acn31]
gi|365740759|gb|AEW80453.1| periplasmic-binding protein [Propionibacterium acnes TypeIA2
P.acn17]
Length = 416
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 89/203 (43%), Gaps = 11/203 (5%)
Query: 142 EDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEFYN 201
E PL RAEW+K GI N E A + ++++ E Y + + A KP V +
Sbjct: 221 ESTPLARAEWMKAYGILLNKEGAATKSFDSIAERYAEVAKKAKNAAD--KPSVLVGQETK 278
Query: 202 GVWSFT-KEAFKLKYVEDAGGENVDSSINKMTYNISNSDDLEQLHAILCTVDVVIDGTY- 259
G W +++ +K++ DAG +V + K N + D E + D ++G Y
Sbjct: 279 GQWYVPGADSYMIKFMTDAGASDVMAQAVKG--NGATPTDAEVVFKYGSKADFWLNGNYM 336
Query: 260 TLEPANYTQSTFLENIDAADKSCFAFLTNQSLWRFDKRNQNSLALDWFDGAVSQPQLVLA 319
++ + +N A+ S F + ++W KR D++ + QP +VLA
Sbjct: 337 SMTTWHGKDDALKQNPRYANLSAF---QHGNVWNPSKRTAPDTGNDFWQSGIVQPDVVLA 393
Query: 320 DLTEALFP--TGNYTITYFRNIA 340
DLT P YT Y+ ++
Sbjct: 394 DLTYIFHPDLMKGYTPYYYTKLS 416
>gi|407934479|ref|YP_006850121.1| periplasmic binding protein [Propionibacterium acnes C1]
gi|407903060|gb|AFU39890.1| periplasmic binding protein [Propionibacterium acnes C1]
Length = 416
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 89/203 (43%), Gaps = 11/203 (5%)
Query: 142 EDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEFYN 201
E PL RAEW+K GI N E A + ++++ E Y + + A KP V +
Sbjct: 221 ESTPLARAEWMKAYGILLNKEGAATKSFDSIAERYAEVAKKAKNAAD--KPSVLVGQETK 278
Query: 202 GVWSFT-KEAFKLKYVEDAGGENVDSSINKMTYNISNSDDLEQLHAILCTVDVVIDGTY- 259
G W +++ +K++ DAG +V + K N + D E + D ++G Y
Sbjct: 279 GQWYVPGADSYMIKFMTDAGASDVMAQAVKG--NGATPTDAEVVFKYGSKADFWLNGNYM 336
Query: 260 TLEPANYTQSTFLENIDAADKSCFAFLTNQSLWRFDKRNQNSLALDWFDGAVSQPQLVLA 319
++ + +N A+ S F + ++W KR D++ + QP +VLA
Sbjct: 337 SMTTWHGKDDALKQNPRYANLSAF---KHGNVWNPSKRTAPDTGNDFWQSGIVQPDVVLA 393
Query: 320 DLTEALFP--TGNYTITYFRNIA 340
DLT P YT Y+ ++
Sbjct: 394 DLTYIFHPDLMKGYTPYYYTKLS 416
>gi|387502474|ref|YP_005943703.1| periplasmic-binding protein [Propionibacterium acnes 6609]
gi|335276519|gb|AEH28424.1| periplasmic-binding protein [Propionibacterium acnes 6609]
Length = 416
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 89/203 (43%), Gaps = 11/203 (5%)
Query: 142 EDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEFYN 201
E PL RAEW+K GI N E A + ++++ E Y + + A KP V +
Sbjct: 221 ESTPLARAEWMKAYGILLNKEGAATKSFDSIAERYAEVAKKAKNAAD--KPSVLVGQETK 278
Query: 202 GVWSFT-KEAFKLKYVEDAGGENVDSSINKMTYNISNSDDLEQLHAILCTVDVVIDGTY- 259
G W +++ +K++ DAG +V + K N + D E + D ++G Y
Sbjct: 279 GQWYVPGADSYMIKFMTDAGASDVMAQAVKG--NGATPTDAEVVFKYGSKADFWLNGNYM 336
Query: 260 TLEPANYTQSTFLENIDAADKSCFAFLTNQSLWRFDKRNQNSLALDWFDGAVSQPQLVLA 319
++ + +N A+ S F + ++W KR D++ + QP +VLA
Sbjct: 337 SMTTWHGKDDALKQNPRYANLSAF---QHGNVWNPSKRTAPDTGNDFWQSGIVQPDVVLA 393
Query: 320 DLTEALFP--TGNYTITYFRNIA 340
DLT P YT Y+ ++
Sbjct: 394 DLTYIFHPDLMKGYTPYYYTKLS 416
>gi|422386898|ref|ZP_16467015.1| periplasmic-binding protein [Propionibacterium acnes HL096PA2]
gi|422394071|ref|ZP_16474118.1| periplasmic-binding protein [Propionibacterium acnes HL099PA1]
gi|422424081|ref|ZP_16501032.1| periplasmic binding protein [Propionibacterium acnes HL043PA1]
gi|422460836|ref|ZP_16537470.1| periplasmic binding protein [Propionibacterium acnes HL038PA1]
gi|422475778|ref|ZP_16552223.1| periplasmic binding protein [Propionibacterium acnes HL056PA1]
gi|422476350|ref|ZP_16552789.1| periplasmic binding protein [Propionibacterium acnes HL007PA1]
gi|422484904|ref|ZP_16561271.1| periplasmic binding protein [Propionibacterium acnes HL043PA2]
gi|422492352|ref|ZP_16568660.1| periplasmic binding protein [Propionibacterium acnes HL086PA1]
gi|422519627|ref|ZP_16595673.1| periplasmic binding protein [Propionibacterium acnes HL074PA1]
gi|422520403|ref|ZP_16596445.1| periplasmic binding protein [Propionibacterium acnes HL045PA1]
gi|422525479|ref|ZP_16601481.1| periplasmic binding protein [Propionibacterium acnes HL083PA1]
gi|422527927|ref|ZP_16603914.1| periplasmic binding protein [Propionibacterium acnes HL053PA1]
gi|422559444|ref|ZP_16635172.1| periplasmic binding protein [Propionibacterium acnes HL005PA1]
gi|313771221|gb|EFS37187.1| periplasmic binding protein [Propionibacterium acnes HL074PA1]
gi|313811886|gb|EFS49600.1| periplasmic binding protein [Propionibacterium acnes HL083PA1]
gi|313832075|gb|EFS69789.1| periplasmic binding protein [Propionibacterium acnes HL007PA1]
gi|313832882|gb|EFS70596.1| periplasmic binding protein [Propionibacterium acnes HL056PA1]
gi|313839741|gb|EFS77455.1| periplasmic binding protein [Propionibacterium acnes HL086PA1]
gi|314975315|gb|EFT19410.1| periplasmic binding protein [Propionibacterium acnes HL053PA1]
gi|314977730|gb|EFT21825.1| periplasmic binding protein [Propionibacterium acnes HL045PA1]
gi|314985295|gb|EFT29387.1| periplasmic binding protein [Propionibacterium acnes HL005PA1]
gi|315097044|gb|EFT69020.1| periplasmic binding protein [Propionibacterium acnes HL038PA1]
gi|327332617|gb|EGE74352.1| periplasmic-binding protein [Propionibacterium acnes HL096PA2]
gi|327446603|gb|EGE93257.1| periplasmic binding protein [Propionibacterium acnes HL043PA2]
gi|327448954|gb|EGE95608.1| periplasmic binding protein [Propionibacterium acnes HL043PA1]
gi|328759701|gb|EGF73298.1| periplasmic-binding protein [Propionibacterium acnes HL099PA1]
Length = 416
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 89/203 (43%), Gaps = 11/203 (5%)
Query: 142 EDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEFYN 201
E PL RAEW+K GI N E A + ++++ E Y + + A KP V +
Sbjct: 221 ESTPLARAEWMKAYGILLNKEGAATKSFDSIAERYAEVAKKAKNAAD--KPSVLVGQETK 278
Query: 202 GVWSFT-KEAFKLKYVEDAGGENVDSSINKMTYNISNSDDLEQLHAILCTVDVVIDGTY- 259
G W +++ +K++ DAG +V + K N + D E + D ++G Y
Sbjct: 279 GQWYVPGADSYMIKFMTDAGASDVMAQAVKG--NGATPTDAEVVFKYGSKADFWLNGNYM 336
Query: 260 TLEPANYTQSTFLENIDAADKSCFAFLTNQSLWRFDKRNQNSLALDWFDGAVSQPQLVLA 319
++ + +N A+ S F + ++W KR D++ + QP +VLA
Sbjct: 337 SMTTWHGKDDALKQNPRYANLSAF---KHGNVWNPSKRTAPDTGNDFWQSGIVQPDVVLA 393
Query: 320 DLTEALFP--TGNYTITYFRNIA 340
DLT P YT Y+ ++
Sbjct: 394 DLTYIFHPDLMKGYTPYYYTKLS 416
>gi|422429325|ref|ZP_16506230.1| periplasmic binding protein [Propionibacterium acnes HL072PA2]
gi|422534963|ref|ZP_16610886.1| periplasmic binding protein [Propionibacterium acnes HL072PA1]
gi|314980135|gb|EFT24229.1| periplasmic binding protein [Propionibacterium acnes HL072PA2]
gi|315088133|gb|EFT60109.1| periplasmic binding protein [Propionibacterium acnes HL072PA1]
Length = 416
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 89/203 (43%), Gaps = 11/203 (5%)
Query: 142 EDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEFYN 201
E PL RAEW+K GI N E A + ++++ E Y + + A KP V +
Sbjct: 221 ESTPLARAEWMKAYGILLNKEGAATKSFDSIAERYAEVAKKAKNAAD--KPSVLVGQETK 278
Query: 202 GVWSFT-KEAFKLKYVEDAGGENVDSSINKMTYNISNSDDLEQLHAILCTVDVVIDGTY- 259
G W +++ +K++ DAG +V + K N + D E + D ++G Y
Sbjct: 279 GQWYVPGADSYMIKFMTDAGASDVMAQAVKG--NGATPTDAEVVFKYGSKADFWLNGNYM 336
Query: 260 TLEPANYTQSTFLENIDAADKSCFAFLTNQSLWRFDKRNQNSLALDWFDGAVSQPQLVLA 319
++ + +N A+ S F + ++W KR D++ + QP +VLA
Sbjct: 337 SMTTWHGKDDALKQNPRYANLSAF---KHGNVWNPSKRTAPDTGNDFWQSGIVQPDVVLA 393
Query: 320 DLTEALFP--TGNYTITYFRNIA 340
DLT P YT Y+ ++
Sbjct: 394 DLTYIFHPDLMKGYTPYYYTKLS 416
>gi|422544032|ref|ZP_16619872.1| periplasmic binding protein [Propionibacterium acnes HL082PA1]
gi|314964160|gb|EFT08260.1| periplasmic binding protein [Propionibacterium acnes HL082PA1]
Length = 370
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 89/203 (43%), Gaps = 11/203 (5%)
Query: 142 EDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEFYN 201
E PL RAEW+K GI N E A + ++++ E Y + + A KP V +
Sbjct: 175 ESTPLARAEWMKAYGILLNKEGAATKSFDSIAERYAEVAKKAKNAAD--KPSVLVGQETK 232
Query: 202 GVWSFT-KEAFKLKYVEDAGGENVDSSINKMTYNISNSDDLEQLHAILCTVDVVIDGTY- 259
G W +++ +K++ DAG +V + K N + D E + D ++G Y
Sbjct: 233 GQWYVPGADSYMIKFMTDAGASDVMAQAVKG--NGAAPTDAEVIFKYGSKADFWLNGNYM 290
Query: 260 TLEPANYTQSTFLENIDAADKSCFAFLTNQSLWRFDKRNQNSLALDWFDGAVSQPQLVLA 319
++ + +N A+ S F + ++W KR D++ + QP +VLA
Sbjct: 291 SMTTWHGKDDALKQNPRYANLSAF---QHGNVWNPSKRTAPDTGNDFWQSGIVQPDVVLA 347
Query: 320 DLTEALFP--TGNYTITYFRNIA 340
DLT P YT Y+ ++
Sbjct: 348 DLTYIFHPDLMKGYTPYYYTKLS 370
>gi|427726042|ref|YP_007073319.1| Fe3+ ABC transporter substrate-binding protein [Leptolyngbya sp.
PCC 7376]
gi|427357762|gb|AFY40485.1| Fe3+ ABC transporter, periplasmic iron-binding protein
[Leptolyngbya sp. PCC 7376]
Length = 413
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 82/343 (23%), Positives = 144/343 (41%), Gaps = 43/343 (12%)
Query: 11 AQNFHIYYGQTFKVI------KNAIDGRSYLLIQNNSRMAARTKYCTARIKSFVIPMSN- 63
AQ F + Y +KV+ + A + +Y+ +Q + A T Y A I IP
Sbjct: 73 AQGFEVEYHTNYKVVTVKQPWEEAAEDLNYIFVQCGT--PAPTDYPNATIVE--IPTQRV 128
Query: 64 YSVDTDFFPG-KLLGLLSSMKGMTSES-VASGCVLKLYQGG---EIG-LVNKSEPLQFSQ 117
++ T + P + L L S+ G+T + S + K + G E+G L + +E + Q
Sbjct: 129 LAMSTTYLPHIEKLDQLESLVGVTDRRLIYSDIIRKKIEEGVIQEVGDLQSDAEKILNLQ 188
Query: 118 YAAHFTTDSDQPQACNFANF----------APFGEDGPLRRAEWIKFLGIFANAEARANQ 167
+ D ++ F A E PL RAEW+KF + N EA+AN
Sbjct: 189 TDVILSYRLDNTESSGFKTLEALNQPIVLDAAHLEATPLGRAEWLKFTALLFNGEAKANA 248
Query: 168 VYNAVKENYLCLTRVAAGKTKPFKPIVAWMEFYNGVWSFTK-EAFKLKYVEDAGGENVDS 226
+ A+ + Y L + +T P + + GVW +++ ++ DA N++
Sbjct: 249 EFTAIAQRYQDL--IKQTQTLANSPTILSGSPFQGVWYMPAGKSYVAQFFRDA---NINY 303
Query: 227 SINKMTYNISNSDDLEQLHAILCTVDVVIDGTYTLEPANYTQSTFLENIDAADK--SCFA 284
++ +S DLE + D+ ++ + PA + L A DK FA
Sbjct: 304 PWSETDSRLSLPLDLEAVLDQAKDADIWVN----VNPAWQSAKDVL----AEDKRYGLFA 355
Query: 285 FLTNQSLWRFDKRNQNSLALDWFDGAVSQPQLVLADLTEALFP 327
+ ++ + R D+++ V+ P +VLADL + +P
Sbjct: 356 AFETKQVYAANARVAPEGGNDFWESGVTNPDIVLADLIKIAYP 398
>gi|333991821|ref|YP_004524435.1| periplasmic binding protein [Mycobacterium sp. JDM601]
gi|333487789|gb|AEF37181.1| periplasmic binding protein [Mycobacterium sp. JDM601]
Length = 387
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 89/370 (24%), Positives = 140/370 (37%), Gaps = 55/370 (14%)
Query: 4 DISKVEDAQNFHIYYGQTFKVI---KNAIDGR--SYLLIQNNSRMAARTKYCTARIKSFV 58
D S + DA NF I Y ++++++ + + G+ SY+L++ + A + A + V
Sbjct: 41 DKSTLSDAANFAIEYHRSYQILTVHRPYLGGKPVSYVLVRCGAPAPALSGELAAAQRITV 100
Query: 59 IPMSNYSVDTDFFPG-KLLGLLSSMKGMTSES-VASGCVLKLYQGGEI------GLVNKS 110
YS T LG + G+ S + VA + + GE GLVN
Sbjct: 101 PVRRLYSGSTTHLAMITELGEADVVAGVASPAAVADPQIRERIDAGETVGYAPGGLVNIE 160
Query: 111 EPLQFSQYAAHFTTDSDQPQACNFANFAPFGEDG-------------PLRRAEWIKFLGI 157
L H D Q + A + E G PL RAEWIK
Sbjct: 161 SVL-------HAGPDVLVTQGMDDAGYPKLREAGLPVVADAEWLEPTPLGRAEWIKMFAA 213
Query: 158 FANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEFYNGVWSF-TKEAFKLKYV 216
AE RA QVY +++ Y L A+ P K +V M Y+G WS T ++ + V
Sbjct: 214 LTGAERRAGQVYQGIRDRYRALAAQAS-GAAPTKVLVGTM--YSGHWSMPTGASYSGRLV 270
Query: 217 EDAGGEN---VDSSINKMTYNISNSDDLEQLHAILCTVDVVIDGTYTLEPANYTQSTFLE 273
DAGG D N + A + +V D T++ A S + E
Sbjct: 271 ADAGGSYPWLADDGAESRQLNFESV----YTRAADAPLWLVTDDWATVDDAVARDSRYGE 326
Query: 274 NIDAADKSCFAFLTNQSLWRFDKRNQNSLALDWFDGAVSQPQLVLADLTEALFPT--GNY 331
A + +W K +++ ++P L+L DL L P +
Sbjct: 327 ---------LAAVRTGQVWSATKAIGPGGGNLYWERGTARPDLLLGDLVAILHPELGSGH 377
Query: 332 TITYFRNIAK 341
++R + +
Sbjct: 378 DFEFYRQVPR 387
>gi|325676330|ref|ZP_08156009.1| iron compound ABC superfamily ATP binding cassette transporter,
binding protein [Rhodococcus equi ATCC 33707]
gi|325552891|gb|EGD22574.1| iron compound ABC superfamily ATP binding cassette transporter,
binding protein [Rhodococcus equi ATCC 33707]
Length = 395
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 87/361 (24%), Positives = 140/361 (38%), Gaps = 44/361 (12%)
Query: 4 DISKVEDAQNFHIYYGQTFKVIKNAIDGR---SYLLIQNNSRMAARTKYCTARIKSFVIP 60
D VE A+NF I Y Q+++V+ G+ SY+L + + T A + P
Sbjct: 53 DKQTVEYAENFDIEYHQSYQVVTVRQPGQADESYVLTRCGAPAPELTGDL-AGAQQVTTP 111
Query: 61 MSN-YSVDTDFFPG-KLLGLLSSMKGMTSE----------SVASGCVLKLYQGGEIGL-- 106
+++ ++ T P + LG L + G S +A V + G++
Sbjct: 112 VTSLFAESTTHLPSLEALGKLDVLTGFASADYVYSEAARAHIADDGVTQFATAGQVDAEA 171
Query: 107 VNKSEPLQF-----SQYAAHFTTDSDQPQACNFANFAPFGEDGPLRRAEWIKFLGIFANA 161
V P F + A S P N+ + E PL RAEWIKF
Sbjct: 172 VVAQAPQAFVTGGFTDPAFAVIERSKIPVLDNY----DWLETDPLGRAEWIKFFAALTGT 227
Query: 162 EARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEFYNGVWSFTKEAFKLKYVEDAGG 221
E +A + ++ + Y T +AA PIV + Y G WS ++
Sbjct: 228 EQQATETFDGIVSEYGKYTTLAANVAD--APIVPGLP-YQGAWSVPLASYT--------- 275
Query: 222 ENVDSSINKMTYNISNSDDLEQLHAILCTVDVVIDGTYTLEPANYTQSTFLENIDAADK- 280
N S ++T+ + L L TV G + L + + E I A +
Sbjct: 276 -NDLYSTARITHPWMSEPGTGSLQTDLETV-FAKAGGFPLAISTSSNRAKAEAIAAEPRL 333
Query: 281 SCFAFLTNQSLWRFDKRNQNSLALDWFDGAVSQPQLVLADLTEALFP--TGNYTITYFRN 338
+ FA + +W R ++ ALD ++ V +P LVLADL P + T++R
Sbjct: 334 AEFAAFRDGQVWTSSARMTDAGALDIYEQGVLRPDLVLADLIAIAHPDLLPGHEFTFYRR 393
Query: 339 I 339
+
Sbjct: 394 L 394
>gi|443474404|ref|ZP_21064381.1| ABC-type transporter, periplasmic subunit [Pseudanabaena biceps PCC
7429]
gi|443020876|gb|ELS34786.1| ABC-type transporter, periplasmic subunit [Pseudanabaena biceps PCC
7429]
Length = 395
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 83/362 (22%), Positives = 148/362 (40%), Gaps = 42/362 (11%)
Query: 6 SKVEDAQNFHIYYGQTFKVI------KNAIDGRSYLLIQNNSRMAARTKYCTARIKSFVI 59
SKV+ A F I Y + +KV+ K+A + Y L+Q + A + ++I +
Sbjct: 48 SKVDHAIGFSISYHKNYKVVTVNQPWKSAKEEFRYALVQCGTPNPA--GFTESQIVQ--V 103
Query: 60 PMSNYSVDTDFFPGKL--LGLLSSMKGMTSESVASGCVLK-------LYQGGEIGLVNKS 110
P+ ++ + L L LL + M S + G +K + G +N
Sbjct: 104 PVRTVAILSTTHLAHLEKLDLLDRIVAMDSLELVYGEDVKARLKRNNVQDAGRNNALNLE 163
Query: 111 EPLQFS-----QYAAHFTTDSDQPQ----ACNFANFAPFGEDGPLRRAEWIKFLGIFANA 161
L S Y P+ A A + E PL +AEWIKF +F N
Sbjct: 164 RLLALSPDLITTYGTGNPARDSHPKLLEAGLKVAINAEYMESSPLGQAEWIKFTALFFNQ 223
Query: 162 EARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEFYNGVWSFT-KEAFKLKYVEDAG 220
E +AN V+ + Y + +A KT +P V +G W +++ K++EDAG
Sbjct: 224 EDKANLVFADIVTRYEKVAAIA--KTAKQRPTVLIGFHRSGTWYMAGGKSYAAKFLEDAG 281
Query: 221 GENVDSSINKMTYNISNSDDLEQLHAILCTVDVVIDGTYTLEPANYTQSTFLENIDAADK 280
+ + SN E ++ + D ++G+ ++ Q + D +
Sbjct: 282 ASYLWADEPTAG---SNPLSFEAVYLRGRSADFWLNGS-----QDWKQKEDIPKSDGRYR 333
Query: 281 SCFAFLTNQSLWRFDKRNQNSLALDWFDGAVSQPQLVLADLTEALFP--TGNYTITYFRN 338
A+ Q ++ + R N+ D++ ++ P +VLADL + P +Y + Y++
Sbjct: 334 DFQAWQIGQ-MYNNNARISNNGGNDYWQSGITNPDVVLADLVKIFHPELMPDYQLFYYKK 392
Query: 339 IA 340
+A
Sbjct: 393 LA 394
>gi|88802819|ref|ZP_01118346.1| periplasmic-binding protein of ABC transporter [Polaribacter
irgensii 23-P]
gi|88781677|gb|EAR12855.1| periplasmic-binding protein of ABC transporter [Polaribacter
irgensii 23-P]
Length = 370
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 90/201 (44%), Gaps = 15/201 (7%)
Query: 142 EDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEFYN 201
E+ PL RAEWIKF G+ E A+ ++ +++ YL + +AA T P V +
Sbjct: 181 EETPLGRAEWIKFFGVLFGKEKEADSIFKSIETRYLKVKELAAQITNT--PTVLSGNLFK 238
Query: 202 GVWSF-TKEAFKLKYVEDAGGENVDSSINKMTYNISNSDDLEQLHAILCTVDVVIDGTYT 260
VW E+F Y +DA N D N T + S +E + +D D TY
Sbjct: 239 DVWYMPAGESFIANYFKDA---NTDYLWNHTTGSGSMPLSIESV------LDKAQDATYW 289
Query: 261 LEPANYTQSTFLENIDAADKSCFAFLTNQSLWRFDKRNQNSLALDWFDGAVSQPQLVLAD 320
+ + + ++ K+ AF +++ + + L +F+ + ++P LVL D
Sbjct: 290 IGCGLFENKKDMLKTNSYYKAFNAF-KKSNIYTYATNKGETGGLVYFEKSPTRPDLVLKD 348
Query: 321 LTEALFPT--GNYTITYFRNI 339
+ + P +Y +T+F +
Sbjct: 349 IIKITQPQLLPDYQLTFFEKM 369
>gi|302337538|ref|YP_003802744.1| periplasmic binding protein [Spirochaeta smaragdinae DSM 11293]
gi|301634723|gb|ADK80150.1| periplasmic binding protein [Spirochaeta smaragdinae DSM 11293]
Length = 416
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 90/205 (43%), Gaps = 17/205 (8%)
Query: 142 EDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEFYN 201
E PL RAEWIKF+ +F E A ++++ +++ Y + + +P V +
Sbjct: 221 EASPLARAEWIKFIALFFGKEQEAKEIFSTIEKRYRETAELTSDLVLSDRPTVLLNNPFG 280
Query: 202 GVWSFT-KEAFKLKYVEDAGGENVDSSINKMTYNISNSDDLEQLHAILCTVDVVIDGTYT 260
G W E++ + ++DAGG + I S S DLE + D+ +
Sbjct: 281 GSWIVPGGESYMARLIKDAGGRYLWDDIPGTG---SVSLDLEAVFLRAHDADIWLH---- 333
Query: 261 LEPANYTQSTFLENIDAADK--SCFAFLTNQSLWRFDKRNQNSLALDWFDGAVSQPQLVL 318
Y S+ L+++ AAD + F + N ++ DK +++ + +P L+L
Sbjct: 334 ----QYGWSS-LDDVRAADSRFADFRAVRNGAVINNDKARTPGGGNEFYGSGIIRPDLIL 388
Query: 319 ADLTEALFP--TGNYTITYFRNIAK 341
+DL P ++ Y+R + K
Sbjct: 389 SDLVALFHPDLLPDHHFVYYRPLPK 413
>gi|440683562|ref|YP_007158357.1| ABC-type transporter, periplasmic subunit [Anabaena cylindrica PCC
7122]
gi|428680681|gb|AFZ59447.1| ABC-type transporter, periplasmic subunit [Anabaena cylindrica PCC
7122]
Length = 403
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 89/365 (24%), Positives = 153/365 (41%), Gaps = 52/365 (14%)
Query: 7 KVEDAQNFHIYYGQTFKVI------KNAIDGRSYLLIQNNSRMAARTKYCTARIKSFVIP 60
KV A F + Y + +KV+ K+A G Y+L+Q T + + F P
Sbjct: 57 KVNHAIGFAVEYYKNYKVVTIKNPWKDAKTGFKYVLVQ----CGTPTPPGFDQSQVFTTP 112
Query: 61 M-SNYSVDTDFFPG--------KLLGLLSSMKGMTSESVASGCVLKLYQGGEIGLVNKSE 111
+ S S+ T P KL+G+ + T E + K+ G VN +
Sbjct: 113 VNSVISLSTTHLPHFSKLNVVDKLIGVSDIKQVTTPEFIDRIKAGKVVSVGNNSTVNVEK 172
Query: 112 PLQFS-QYAAHFTTDSDQPQA--------CNFANFAPFGEDGPLRRAEWIKFLGIFANAE 162
L+ + + F T + Q + A A + ED PL R+EW+KF +F N E
Sbjct: 173 VLELNPELVTTFGTGNQQTDSFPKLLEAGLKVAINAEYMEDTPLGRSEWLKFTALFFNKE 232
Query: 163 ARANQVYNAVKENYLCL-TRVAAGKTKPFKPIVAWMEF-YNGVWSFT-KEAFKLKYVEDA 219
A A +++ + + Y + + A K +P ++ F + G W ++ KY+ DA
Sbjct: 233 AAAEKIFATIAKKYEDIAVKAKAVKNRP----TVFVGFNFKGTWHTPGGNSYVAKYLADA 288
Query: 220 GGENVDSSINKMTYNISNSDDLEQLHAILCTVDVVIDGTYTLEPANYTQS-TFLENIDAA 278
G N S NK + ++ S + + + Y L N+ QS L+++
Sbjct: 289 GA-NYLWSENKSSGSLPISFE--------AVFERAANADYWL---NFRQSWKTLKDVIIE 336
Query: 279 DK--SCFAFLTNQSLWRFDKRNQNSLALDWFDGAVSQPQLVLADLTEALFPT--GNYTIT 334
D S F +L+ + R + D++ +S P +VL+DL + L P N+ +
Sbjct: 337 DSRYSDFQAFKEGNLYNNNARVNANGGNDYWQSGISNPDVVLSDLMKILHPEILKNHQLF 396
Query: 335 YFRNI 339
Y+R +
Sbjct: 397 YYRKL 401
>gi|255039109|ref|YP_003089730.1| periplasmic binding protein [Dyadobacter fermentans DSM 18053]
gi|254951865|gb|ACT96565.1| periplasmic binding protein [Dyadobacter fermentans DSM 18053]
Length = 390
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 83/369 (22%), Positives = 150/369 (40%), Gaps = 53/369 (14%)
Query: 4 DISKVEDAQNFHIYYGQTFKVIK------NAIDGRSYLLIQNNSRMAARTKYCTARIKSF 57
D ++ A+ F I Y +KV+K A D +Y+L+Q + K +
Sbjct: 41 DKVQLAHAKGFTITYRDHYKVVKIMSPFEKATDTLTYILVQRGTPRPIGYKDS----QVI 96
Query: 58 VIPMSNYSVDTDFFPGKLLGLLSSMKGMTS----ESVASGCVLKLYQGGEIGLVNK---- 109
IP+ + + G L+G L + +T + V+S VL+ G+I V K
Sbjct: 97 EIPVRSMVAMSSLHLG-LVGFLGCEEIVTGMGNLKYVSSDKVLRRINAGKIAEVGKDQGL 155
Query: 110 SEPLQFSQYA-AHFTTDSDQPQACNFANFAPFG----------EDGPLRRAEWIKFLGIF 158
+E L S + T S + + + G E PL RAEW+K +
Sbjct: 156 NEELLISMHPDLVMATGSPVSKVNRYESLYQAGIPVMVNSEWVETTPLGRAEWVKLMAAL 215
Query: 159 ANAEARANQVYNAVKENYLCLTRVAAGKTKPFKP-IVAWMEFYNGVWSFTKEAFKLKYVE 217
N E N+ + V++ Y L ++ A T +P ++ M + + +++ ++
Sbjct: 216 INREGEVNKKFARVEKEYQKLVQLTANVTS--RPSLITGMNSKDAWYVPNGDSYVYRFFR 273
Query: 218 DAGGENVDSSINKMTYNISNSDDLEQLHAILCTV-DVVIDGTYTLEPA----NYTQSTFL 272
DAG +Y+ +N+ L TV V + Y L + +
Sbjct: 274 DAGA----------SYHWANTKATGSLPLSFETVYPVALQADYWLNVSIGNVQTKKDVLA 323
Query: 273 ENIDAADKSCFAFLTNQSLWRFDKRNQNSLALDWFDGAVSQPQLVLADLTEALFP--TGN 330
++ AD F TN+ ++ ++KR A D+++ P LVLADL + P +
Sbjct: 324 RDVRYADFKSFK--TNR-IYSYNKRMNAQGANDYWESGAVNPHLVLADLIRIIHPELLPD 380
Query: 331 YTITYFRNI 339
+ + Y+++I
Sbjct: 381 HELIYYKSI 389
>gi|325281041|ref|YP_004253583.1| periplasmic binding protein [Odoribacter splanchnicus DSM 20712]
gi|324312850|gb|ADY33403.1| periplasmic binding protein [Odoribacter splanchnicus DSM 20712]
Length = 380
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 48/84 (57%), Gaps = 3/84 (3%)
Query: 140 FGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEF 199
+ E PL +AEWIKF+G+ E +AN+++N +++ Y L R+ A +P+V E
Sbjct: 190 YKETTPLGQAEWIKFVGLLIGEEEKANKIFNEIEQKYNDLKRLTARVEH--RPVVLSGEI 247
Query: 200 YNGVW-SFTKEAFKLKYVEDAGGE 222
+ G W + ++F + EDAG +
Sbjct: 248 HGGTWYAVGGQSFLAQVFEDAGAD 271
>gi|298209065|ref|YP_003717244.1| periplasmic-binding protein of ABC transporter [Croceibacter
atlanticus HTCC2559]
gi|83848992|gb|EAP86861.1| periplasmic-binding protein of ABC transporter [Croceibacter
atlanticus HTCC2559]
Length = 378
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 92/200 (46%), Gaps = 17/200 (8%)
Query: 142 EDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEFYN 201
E PL +AEW+KF G+ N +A Q++N + +Y ++A K+ KP V Y
Sbjct: 189 ETHPLGKAEWLKFFGVLFNKTDKATQLFNEIATSYEETKKLA--KSVNEKPTVLCGAMYK 246
Query: 202 GVWSFT-KEAFKLKYVEDAGGENVDSSINKMTYNISNSDDLEQLHAILCTVDVVIDGTYT 260
VW +++ K++ DA K Y +N L A +D + Y
Sbjct: 247 DVWYLPYGNSWQAKFISDANA--------KYVYGYTNGKGSISL-AFEKVLDKAENSEYW 297
Query: 261 LEPANYTQSTFLENIDAADK-SCFAFLTNQSLWRFDKRNQNSLALDWFDGAVSQPQLVLA 319
L P ++ S++ ++A+ + F +++++ F + + +++ ++P LVL
Sbjct: 298 LAPGSF--SSYDAMLEASSHYNQFKAFQDKTIFSFASTTGETGGVLYYELGPNRPDLVLK 355
Query: 320 DLTEALFPT--GNYTITYFR 337
D+ L P +YT T+F+
Sbjct: 356 DMVSILHPELLKDYTPTFFK 375
>gi|159898631|ref|YP_001544878.1| periplasmic binding protein [Herpetosiphon aurantiacus DSM 785]
gi|159891670|gb|ABX04750.1| periplasmic binding protein [Herpetosiphon aurantiacus DSM 785]
Length = 435
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 118/269 (43%), Gaps = 30/269 (11%)
Query: 75 LLGLLSSMKGMTSE-------SVASGCVLKLYQGGE-IGLVNKSEP-LQFSQYAAHFTTD 125
L G++ SM G +E VA V+K GE + L+ +P + + + T+
Sbjct: 164 LSGVVGSMTGSANEYLPSIAAQVAKASVIKEASYGEDLELIAAGKPDIYLNTNGREWMTN 223
Query: 126 SDQPQACNFANFAPFGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAG 185
+ Q +++PF E PL AE +KFL +F N EA+A+ ++ ++ YL L A
Sbjct: 224 ARQ-VGIPALHYSPFSE-SPLGSAEQVKFLALFYNLEAKADAIFTPIEREYLALREKAQA 281
Query: 186 KTKPFKPIVAWMEFYNGVWSFTKEAFKLKYV--EDAGGENV--DSSINKMTYNISNSD-- 239
T KP V T+ +L+ V DAGGE V D+ +N + S
Sbjct: 282 ATN--KPSVLIGNVTQDGRFGTRNLDRLESVLMRDAGGELVLTDTELNLGGGSTGFSSSI 339
Query: 240 DLEQLHAILCTVDVVIDGTYTLEPANYTQSTFLENIDAADKSCFAFLTNQSLWRFDKRNQ 299
DLE+ I D + Y P++ T S F+ + + S A S RF +
Sbjct: 340 DLEKAIEIGANADFWFNLVYV--PSDNTASEFIAT-NPLNASFSALQKGNSFHRFGR--- 393
Query: 300 NSLALDWF-DGAVSQPQLVLADLTEALFP 327
A D+F +GAV QL LAD L P
Sbjct: 394 ---AEDYFSNGAVYVDQL-LADAVSILHP 418
>gi|416111904|ref|ZP_11592928.1| periplasmic binding protein [Riemerella anatipestifer RA-YM]
gi|315022200|gb|EFT35228.1| periplasmic binding protein [Riemerella anatipestifer RA-YM]
Length = 348
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 73/312 (23%), Positives = 124/312 (39%), Gaps = 39/312 (12%)
Query: 38 QNNSRMAARTKYCTARIKSFVIPMSNYSVDTDFFPGKLL--GLLSSMKGMTSES-VASGC 94
++N+++ TK ++ I + +P+ + + G +L GL S + G++SE V S
Sbjct: 39 EDNNKVIINTKNLSSEISAAKLPLKKVVLLSSSMLGYMLELGLESHIIGISSEEYVYSEK 98
Query: 95 VLKLYQGGEIGLVNKSEPLQFSQYAAHFTTDSDQPQACNFAN--------------FAPF 140
V L Q +I V + + + NF N +
Sbjct: 99 VKALIQSKKIHTVGNEQKYDLEKIISLKPDAIITNHIPNFENTYNLLRKNNIEIIFLNEY 158
Query: 141 GEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEFY 200
E+ PL + ++K G E +A++ Y +K+NY L ++ A KT P KP V E Y
Sbjct: 159 LENEPLEKTAYLKIFGKLFGIEKQASERYLNIKQNYDNL-KLQAQKT-PHKPQVLCNEIY 216
Query: 201 NGVWSFT-KEAFKLKYVEDAGGENVDSSINKMTYNISNSDDLEQLHAILCTVDVVI---- 255
W + F KY DAGG + +DL++ ++ + + V
Sbjct: 217 GNQWFLPGNKTFAAKYFNDAGGNYI-------------FNDLDKDQSVPLSFEEVYAKSK 263
Query: 256 DGTYTLEPANYTQSTFLENIDAADKSCFAFLTNQSLWRFDKRNQNSLALDWFDGAVSQPQ 315
Y + +NY L ++ + S L+ KR Q A D+F+ V +
Sbjct: 264 QAEYWVNLSNYQYKNELLAMNPS-YSKMDIFKKGKLYNIAKR-QKGKANDYFESGVVRAD 321
Query: 316 LVLADLTEALFP 327
LVL D + P
Sbjct: 322 LVLKDYVKIFHP 333
>gi|340616070|ref|YP_004734523.1| vitamin B12 ABC transporter periplasmic [Zobellia galactanivorans]
gi|339730867|emb|CAZ94131.1| Vitamin B12 ABC importer, periplasmic component [Zobellia
galactanivorans]
Length = 382
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 86/187 (45%), Gaps = 13/187 (6%)
Query: 142 EDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEFYN 201
E+ PL +AEWIKF F EA+A+ ++NA+ EN T+ K K +P V Y
Sbjct: 193 EESPLGKAEWIKFFAPFFQLEAKADSIFNAI-ENSYQKTKALVAKVKT-RPTVLTGGLYK 250
Query: 202 GVWSFT-KEAFKLKYVEDAGGENVDSSINKMTYNISNSDDLEQLHAILCTVDVVIDGTYT 260
VW +++ +++EDA + + + T IS S L A+L Y
Sbjct: 251 DVWHVAGGKSWMAQFLEDAKADYLYKD-DTETGGISLS-----LEAVLAKSQ---QADYW 301
Query: 261 LEPANYTQSTFLENIDAADKSCFAFLTNQSLWRFDKRNQNSLALDWFDGAVSQPQLVLAD 320
L P+ T + +E + A + F N++++ ++ L +++ A +P LVL D
Sbjct: 302 LNPSMITSYSEMEKAN-AHYTQFKAFKNKNIFSNTLAKGSTGGLLYYEMAPMKPDLVLKD 360
Query: 321 LTEALFP 327
L P
Sbjct: 361 LIHIFHP 367
>gi|407452401|ref|YP_006724126.1| hypothetical protein B739_1634 [Riemerella anatipestifer RA-CH-1]
gi|403313385|gb|AFR36226.1| hypothetical protein B739_1634 [Riemerella anatipestifer RA-CH-1]
Length = 348
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 124/312 (39%), Gaps = 39/312 (12%)
Query: 38 QNNSRMAARTKYCTARIKSFVIPMSNYSVDTDFFPGKLL--GLLSSMKGMTSES-VASGC 94
++N+++ TK ++ I + +P+ + + G +L GL S + G++SE + S
Sbjct: 39 EDNNKVIINTKNLSSEISTAKLPLKKVVLLSSSMLGYMLELGLESHIIGISSEEYIYSEK 98
Query: 95 VLKLYQGGEIGLVNKSEPLQFSQYAAHFTTDSDQPQACNFAN--------------FAPF 140
V L Q +I V + + + NF N +
Sbjct: 99 VKALIQSKKIHTVGNEQKYDLEKIISLKPDAVITNHIPNFENTYDLLRKNNIEVIFLNEY 158
Query: 141 GEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEFY 200
E+ PL + ++K G E +A++ Y +K+NY L ++ A KT P KP V E Y
Sbjct: 159 LENEPLEKTAYLKIFGKLFGIEKQASERYLNIKQNYDNL-KLQAQKT-PHKPQVLCNEIY 216
Query: 201 NGVWSFT-KEAFKLKYVEDAGGENVDSSINKMTYNISNSDDLEQLHAILCTVDVVI---- 255
W + F KY DAGG + +DL++ ++ + + V
Sbjct: 217 GNQWFLPGNKTFAAKYFNDAGGNYI-------------FNDLDKDQSVPLSFEEVYAKSK 263
Query: 256 DGTYTLEPANYTQSTFLENIDAADKSCFAFLTNQSLWRFDKRNQNSLALDWFDGAVSQPQ 315
Y + +NY L ++ + S L+ KR Q A D+F+ V +
Sbjct: 264 QAEYWVNLSNYQYKNELLAMNPS-YSKMDIFKKGKLYNIAKR-QKGKANDYFESGVVRAD 321
Query: 316 LVLADLTEALFP 327
LVL D + P
Sbjct: 322 LVLKDYIKIFHP 333
>gi|156742220|ref|YP_001432349.1| periplasmic binding protein [Roseiflexus castenholzii DSM 13941]
gi|156233548|gb|ABU58331.1| periplasmic binding protein [Roseiflexus castenholzii DSM 13941]
Length = 434
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 86/194 (44%), Gaps = 23/194 (11%)
Query: 140 FGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEF 199
+ E PL RAEWIKF F N EARA +VY+ + Y + A T KP V
Sbjct: 242 YMETSPLGRAEWIKFTAAFFNREARATEVYDRISSRYKEMAAKARNVTN--KPTVFTGAP 299
Query: 200 YNGVWSFT-KEAFKLKYVEDAGGENV---DSSINKMTYNISNSDDLEQLHAILCTVDVVI 255
+ G W + +++ + + DAG + D+S + +S + E+
Sbjct: 300 FQGTWFVSGGQSYAAQLLADAGAMYLWADDTSTGSLP--LSFEEVFERAR---------- 347
Query: 256 DGTYTLEPANYTQSTFLENIDAADK--SCFAFLTNQSLWRFDKRNQNSLALDWFDGAVSQ 313
D + L P + L + A D+ + FA +++ +KR + D+F+ ++
Sbjct: 348 DADFWLNPGMWKS---LADGKAEDERFTQFAAFQKGNVFNNNKRLNENGGNDYFESGLTN 404
Query: 314 PQLVLADLTEALFP 327
P +VLADL + P
Sbjct: 405 PDVVLADLIKIFHP 418
>gi|386322129|ref|YP_006018291.1| hypothetical protein RIA_1886 [Riemerella anatipestifer RA-GD]
gi|442314927|ref|YP_007356230.1| hypothetical protein G148_1232 [Riemerella anatipestifer RA-CH-2]
gi|325336672|gb|ADZ12946.1| hypothetical protein RIA_1886 [Riemerella anatipestifer RA-GD]
gi|441483850|gb|AGC40536.1| hypothetical protein G148_1232 [Riemerella anatipestifer RA-CH-2]
Length = 372
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 73/312 (23%), Positives = 124/312 (39%), Gaps = 39/312 (12%)
Query: 38 QNNSRMAARTKYCTARIKSFVIPMSNYSVDTDFFPGKLL--GLLSSMKGMTSES-VASGC 94
++N+++ TK ++ I + +P+ + + G +L GL S + G++SE V S
Sbjct: 63 EDNNKVIINTKNLSSEISAAKLPLKKVVLLSSSMLGYMLELGLESHIIGISSEEYVYSEK 122
Query: 95 VLKLYQGGEIGLVNKSEPLQFSQYAAHFTTDSDQPQACNFAN--------------FAPF 140
V L Q +I V + + + NF N +
Sbjct: 123 VKALIQSKKIHTVGNEQKYDLEKIISLKPDAIITNHIPNFENTYNLLRKNNIEIIFLNEY 182
Query: 141 GEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEFY 200
E+ PL + ++K G E +A++ Y +K+NY L ++ A KT P KP V E Y
Sbjct: 183 LENEPLEKTAYLKIFGKLFGIEKQASERYLNIKQNYDNL-KLQAQKT-PHKPQVLCNEIY 240
Query: 201 NGVWSFT-KEAFKLKYVEDAGGENVDSSINKMTYNISNSDDLEQLHAILCTVDVVI---- 255
W + F KY DAGG + +DL++ ++ + + V
Sbjct: 241 GNQWFLPGNKTFAAKYFNDAGGNYI-------------FNDLDKDQSVPLSFEEVYAKSK 287
Query: 256 DGTYTLEPANYTQSTFLENIDAADKSCFAFLTNQSLWRFDKRNQNSLALDWFDGAVSQPQ 315
Y + +NY L ++ + S L+ KR Q A D+F+ V +
Sbjct: 288 QAEYWVNLSNYQYKNELLAMNPS-YSKMDIFKKGKLYNIAKR-QKGKANDYFESGVVRAD 345
Query: 316 LVLADLTEALFP 327
LVL D + P
Sbjct: 346 LVLKDYVKIFHP 357
>gi|393787242|ref|ZP_10375374.1| hypothetical protein HMPREF1068_01654 [Bacteroides nordii
CL02T12C05]
gi|392658477|gb|EIY52107.1| hypothetical protein HMPREF1068_01654 [Bacteroides nordii
CL02T12C05]
Length = 374
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 91/207 (43%), Gaps = 36/207 (17%)
Query: 146 LRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEFYNGVW- 204
L RAEWIKF+G F + EA A+ +Y +++ Y A + P + + Y G W
Sbjct: 190 LGRAEWIKFIGAFFDKEALADSIYTGIEQRYNDSKMKAL--VLSYAPSIFSGQDYRGTWS 247
Query: 205 -----SFTKEAFK-----LKYVEDAGGENVDSSINKMTYNISNSDDLEQLHAILCTVDVV 254
S+T + F+ KY +D+ ++ S+I ++ N + +D I V
Sbjct: 248 LPGGKSYTAQLFRDAGASYKYSQDSTSTSIPSNIEEVLVNFNQAD-------IWIGVQ-- 298
Query: 255 IDGTYTLEPANYTQSTFLENIDAADKSCFAFLTNQSLWRFDKRNQNSLALDWFDGAVSQP 314
T +LE T S + F +++ +KR + D+++ V++P
Sbjct: 299 ---TSSLEELGKTDSKY---------KLFKAYKEGNVYNTNKRINATGGNDYWESGVARP 346
Query: 315 QLVLADLTEALFPT--GNYTITYFRNI 339
L+L D+ + P+ Y +TY+ +
Sbjct: 347 DLLLNDMIKICHPSLLSEYELTYYERL 373
>gi|170077258|ref|YP_001733896.1| Fe3+ ABC transporter periplasmic iron-binding protein
[Synechococcus sp. PCC 7002]
gi|169884927|gb|ACA98640.1| Fe3+ ABC transporter, periplasmic iron-binding protein
[Synechococcus sp. PCC 7002]
Length = 404
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 87/201 (43%), Gaps = 14/201 (6%)
Query: 142 EDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEFYN 201
E PL RAEW+KF + N EA AN+ + A+ Y L V K P V Y
Sbjct: 211 EPTPLGRAEWLKFTALLFNEEAEANETFGAIANRYQAL--VNQVKDLETTPTVLSGSPYQ 268
Query: 202 GVWSFT-KEAFKLKYVEDAGGENVDSSINKMTYNISNSDDLEQLHAILCTVDVVIDGTYT 260
GVW E++ + + DA NV+ + T +S D E T D+ ++
Sbjct: 269 GVWYVPGGESYVAQLLRDA---NVNYPWDATTARLSLPLDFEAALGRAKTADLWLN---- 321
Query: 261 LEPANYTQSTFLENIDAADKSCFAFLTNQSLWRFDKRNQNSLALDWFDGAVSQPQLVLAD 320
+ P T + + + F + NQ ++ + R D+++G P ++LAD
Sbjct: 322 VNPDWQTTADIFQ--EDPRYKLFEAVQNQQVYAANNRVAPGGGNDFWEGGTLNPDVILAD 379
Query: 321 LTEALFP--TGNYTITYFRNI 339
+ + P ++ + Y+R++
Sbjct: 380 VIKIAHPDQLPDHELYYYRHL 400
>gi|397670852|ref|YP_006512387.1| periplasmic-binding protein [Propionibacterium propionicum F0230a]
gi|395143116|gb|AFN47223.1| periplasmic-binding protein [Propionibacterium propionicum F0230a]
Length = 442
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 76/340 (22%), Positives = 134/340 (39%), Gaps = 35/340 (10%)
Query: 11 AQNFHIYYGQTFKVI--KNAIDGRS---YLLIQNNSRMAARTKYCTARIKSFVIPMSNYS 65
A + Y ++K + K + G S Y+L+Q + ++ A+ S + + S
Sbjct: 99 ATGVTVEYHGSYKTVTVKEPLQGASPETYVLVQCGANPELPSELANAQRISIPVHRAATS 158
Query: 66 VDTDFFPGKLLGLLSSMKGMTSES-VASGCVLKLYQGGEI-GLVNKSEPLQFSQYAAH-- 121
T +LLG S+ + S + V S + KL G+I G N S + AA
Sbjct: 159 STTQLPAFELLGATDSLAAVQSPAFVWSEPITKLIADGKIVGFGNDSGGINVETLAAATP 218
Query: 122 ---FTTDSDQPQACNFANF-------APFGEDGPLRRAEWIKFLGIFANAEARANQVYNA 171
F++ + P + + E+ PL R+EW+KF +F N E ANQV+
Sbjct: 219 DLFFSSGTPDPAYDKIRELKIPVVGNSEWLENTPLGRSEWLKFTALFTNTEGTANQVFQK 278
Query: 172 VKENYLCLTRVAAGKTKPFKPIVAWMEFYNGVWSFT-KEAFKLKYVEDAGGENVDSSINK 230
++ +Y + T+ +P +NG W+ ++ ++ DAG
Sbjct: 279 IESDYTAVKDKVQQTTE--RPTAITGAPFNGEWARPGGRSYVAAFLADAG---------- 326
Query: 231 MTYNISNSDDLEQL-HAILCTVDVVIDGTYTLEPANYTQSTFLENIDAADKSCFAFLTNQ 289
MTY ++ + + AI ++ L + + I D Q
Sbjct: 327 MTYVFADDESNSSIPTAIETMLEAGARADIWLNADMMKKWPTISAIGTDDPRLVTIKAAQ 386
Query: 290 S--LWRFDKRNQNSLALDWFDGAVSQPQLVLADLTEALFP 327
++ KR + D+++ V +P LVL DL +A P
Sbjct: 387 DGRVYNPTKRINAAGGNDYWEQGVVRPDLVLRDLAKAAHP 426
>gi|163755369|ref|ZP_02162489.1| periplasmic-binding protein of ABC transporter [Kordia algicida
OT-1]
gi|161324789|gb|EDP96118.1| periplasmic-binding protein of ABC transporter [Kordia algicida
OT-1]
Length = 405
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 93/204 (45%), Gaps = 21/204 (10%)
Query: 142 EDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEFYN 201
E PL RAEWI F F + EA+A++V++ +++NY +A T KP + Y
Sbjct: 216 EKTPLGRAEWIHFFAPFFHKEAKASEVFDTIEKNYNEAKELAKKATT--KPTILAGAMYK 273
Query: 202 GVWSFTK-EAFKLKYVEDAGGENVDSSINKMTYNISNSDDLEQLH-AILCTVDVVIDGTY 259
+W E+F+ +Y+ DA + Y +S+ L +I +D +
Sbjct: 274 DIWYLPAGESFQAQYLIDANAD----------YLWKDSEGTGSLSLSIESVLDKASEADI 323
Query: 260 TLEPANYTQSTFLENIDAADK--SCFAFLTNQSLWRFDKRNQNSLALDWFDGAVSQPQLV 317
+ PA + E++ A + + FA N+ ++ + +++ A ++P +V
Sbjct: 324 WIGPARFKS---YEDLKKASELYTKFAPFKNKKIYSTANTIGKTGGTMYYELAPTRPDIV 380
Query: 318 LADLTEALFPT--GNYTITYFRNI 339
L D+ +A+ P NY +F+ +
Sbjct: 381 LKDIIKAIHPEILPNYEPYFFKPL 404
>gi|298372243|ref|ZP_06982233.1| iron(III) ABC transporter, periplasmic iron-binding protein
[Bacteroidetes oral taxon 274 str. F0058]
gi|298275147|gb|EFI16698.1| iron(III) ABC transporter, periplasmic iron-binding protein
[Bacteroidetes oral taxon 274 str. F0058]
Length = 382
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 90/205 (43%), Gaps = 22/205 (10%)
Query: 142 EDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEFYN 201
E PL R EWIKF+ F N A A+ +++ ++ YL + AA T KP V +
Sbjct: 191 ETSPLARTEWIKFVAAFYNKSAEADSIFDQIESRYLEAKKTAASATD--KPTVLMNANFK 248
Query: 202 GVWSFT-KEAFKLKYVEDAGGENV---DSSINKMTYNISNSDDLEQLHAILCTVDVVIDG 257
G W +++ V DAGG+ D+++ + +S L+ ++ ++V +
Sbjct: 249 GTWYMPGGKSYVANLVADAGGDYFYKNDTTVGSLA--LSFETVLKNFNSADVWLNVPVGS 306
Query: 258 TYTLEPANYTQSTFLENIDAADKSCFAFLTNQSLWRFDKRNQNSLALDWFDGAVSQPQLV 317
L + F + F+F+ R S A D+++ A+ +P +V
Sbjct: 307 MAELLAMEQRHNLFKPT---KTGNVFSFM---------GRYLPSSANDYWETALVEPDVV 354
Query: 318 LADLTEALFPT--GNYTITYFRNIA 340
L D+ AL P+ +Y Y + +A
Sbjct: 355 LKDIIWALHPSLLPDYKPVYIQKVA 379
>gi|404405249|ref|ZP_10996833.1| Fe3+-hydroxamate ABC transporter periplasmic protein [Alistipes sp.
JC136]
Length = 373
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 85/197 (43%), Gaps = 16/197 (8%)
Query: 134 FANFAPFGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPI 193
F + E+ PL +AEW+ + ++ A+ V+ + E Y L + A + P P
Sbjct: 173 FVYIGEYLEESPLGKAEWLVAVSEITDSRAKGEAVFTPIPERYNALKKRVAAASAP-DPK 231
Query: 194 VAWMEFYNGVWSF-TKEAFKLKYVEDAGGENVDSSINKMTYNISNSDDLEQLHAILCTVD 252
V Y G W + E++ + + DAGG+ + K T N S DLE+ + + D
Sbjct: 232 VMINTPYAGSWFMASTESYVARLIADAGGDYI---YKKNTSNRSQPIDLEEAYLLTAQAD 288
Query: 253 VVID--GTYTLEPANYTQSTFLENIDAADKSCFAFLTNQSLWRFDKRNQNSLALDWFDGA 310
+ ++ G +L F A C + +++ +KR + D+++
Sbjct: 289 MWLNAGGASSLGELKSQYPKF------AGTRC---VQAGAVYNCNKRLNAAGGNDYWESG 339
Query: 311 VSQPQLVLADLTEALFP 327
V +P +VL DL + P
Sbjct: 340 VVRPDVVLHDLIAIMHP 356
>gi|288574433|ref|ZP_06392790.1| ABC-type Fe3+-hydroxamate transport system periplasmic
component-like protein [Dethiosulfovibrio peptidovorans
DSM 11002]
gi|288570174|gb|EFC91731.1| ABC-type Fe3+-hydroxamate transport system periplasmic
component-like protein [Dethiosulfovibrio peptidovorans
DSM 11002]
Length = 374
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 88/207 (42%), Gaps = 17/207 (8%)
Query: 137 FAPFGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAW 196
A + ED PL RAEWIKF+G+ E +A ++++ V Y L + +P+V
Sbjct: 180 MAEYLEDSPLARAEWIKFIGLLVGMEEQAIEIFDKVVRRYEVLASMV--DKSQVRPLVLS 237
Query: 197 MEFYNGVWSFTKEAFKLKYVEDAGGENVDSSINKMTYNISNSDDLEQLHAILCTVDVVID 256
+ GVW + + A G S N + + DLE + + D+ ++
Sbjct: 238 GAPFGGVWYVPRRDSWPSMMFRAAGAK--SLWNDLEGTGTAPMDLEAVLVRAESSDIWLN 295
Query: 257 -GTY-TLEPANYTQSTFLENIDAADKSCFAFLTNQSLWRFDKRNQNSLALDWFDGAVSQP 314
G++ +LE A + F ++ D+R + D++ + +P
Sbjct: 296 CGSWRSLEDAERSGLPI---------EAFPPFEKGEIYNNDRRVTSEGGNDYYQSGIVRP 346
Query: 315 QLVLADLTEALFP--TGNYTITYFRNI 339
++LADL + P ++ + Y+R +
Sbjct: 347 DMILADLISIIHPEKMRDHELFYYRKL 373
>gi|124002395|ref|ZP_01687248.1| periplasmic-binding protein of ABC transporter [Microscilla marina
ATCC 23134]
gi|123992224|gb|EAY31592.1| periplasmic-binding protein of ABC transporter [Microscilla marina
ATCC 23134]
Length = 393
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 82/189 (43%), Gaps = 17/189 (8%)
Query: 142 EDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEFYN 201
E PL RAEW+KFL +F N E A + ++A++ YL + ++AA K KP V +
Sbjct: 204 EQHPLARAEWLKFLAVFYNKEKLATEKFDAIEAQYLRVKKLAAQAQK--KPSVLCGLPFK 261
Query: 202 GVWSFTK-EAFKLKYVEDAGGENVDSSINKMTYNISNSDDLEQLHAILCTVDVVIDGTYT 260
G W K ++ +++ DA N + S+ D E + A D +
Sbjct: 262 GTWYTAKGGSYMAQFIRDAQAAYF---WNNTPGSGSHPFDFETVFAKAHNGDFWL----- 313
Query: 261 LEPANYTQSTFLENIDAADK--SCFAFLTNQSLWRFDKRNQNSLALDWFDGAVSQPQLVL 318
N + + L+ I D + FA + ++ +KR D++ P LVL
Sbjct: 314 ----NVSAAKSLKEIQNKDARFTKFAAFNQKRIYNNNKRINAGGGNDYWVTGFVNPHLVL 369
Query: 319 ADLTEALFP 327
+DL + P
Sbjct: 370 SDLVKIFHP 378
>gi|423249195|ref|ZP_17230211.1| hypothetical protein HMPREF1066_01221 [Bacteroides fragilis
CL03T00C08]
gi|423256492|ref|ZP_17237420.1| hypothetical protein HMPREF1067_04064 [Bacteroides fragilis
CL03T12C07]
gi|392649024|gb|EIY42709.1| hypothetical protein HMPREF1067_04064 [Bacteroides fragilis
CL03T12C07]
gi|392656742|gb|EIY50380.1| hypothetical protein HMPREF1066_01221 [Bacteroides fragilis
CL03T00C08]
Length = 379
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 94/200 (47%), Gaps = 19/200 (9%)
Query: 142 EDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEFYN 201
E L RAEWIKF+G F + E A+ +++ + E Y + + A + + P + + Y
Sbjct: 188 EKSILGRAEWIKFIGAFFDKEKLADSIFSQIAEQYNEIKKKA--EKLSYAPSILSGQDYR 245
Query: 202 GVWSF-TKEAFKLKYVEDAGGENVDSSINKMTYNISNSDDLEQLHAILCTVDVVIDGTYT 260
G WS + ++ + DAG ++ ++ +IS+S + +H VD+ +
Sbjct: 246 GTWSMPSGRSYNAQLFRDAGANYYYANDTTVSGSISSSIEEALIH--FNQVDIWVG---- 299
Query: 261 LEPANYTQSTFLENIDAADK--SCFAFLTNQSLWRFDKRNQNSLALDWFDGAVSQPQLVL 318
Q+ LE++ D F N +++ +KR + D+++ V++P L+L
Sbjct: 300 ------VQANTLEDLGKMDPKYKLFKSYKNGNVYHINKRTNIAGGNDYWESGVARPDLLL 353
Query: 319 ADLTEALFPT--GNYTITYF 336
D+ + + P+ Y +TY
Sbjct: 354 NDMIKIVHPSLLPEYELTYM 373
>gi|86133357|ref|ZP_01051939.1| Fe3+-specific periplasmic binding protein [Polaribacter sp. MED152]
gi|85820220|gb|EAQ41367.1| Fe3+-specific periplasmic binding protein [Polaribacter sp. MED152]
Length = 375
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 91/202 (45%), Gaps = 16/202 (7%)
Query: 142 EDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYL-CLTRVAAGKTKPFKPIVAWMEFY 200
E+ PL RAEWIKF G+ N E +A+ ++ ++++NYL V K KP I++
Sbjct: 185 EETPLGRAEWIKFFGVLYNKEKKADSIFKSIEQNYLEAKALVKNLKDKP--TILSGAIMN 242
Query: 201 NGVWSF-TKEAFKLKYVEDAGGENVDSSINKMTYNISNSDDLEQLHAILCTVDVVIDGTY 259
VW+ E+F ++++DA ++N + N L + D Y
Sbjct: 243 KDVWNLPAGESFVAQFLKDA-------NLNYLWQNTVGKGSLS--LSFESVFDKGATANY 293
Query: 260 TLEPANYTQSTFLENIDAADKSCFAFLTNQSLWRFDKRNQNSLALDWFDGAVSQPQLVLA 319
+ P ++ + + K AF N ++ + + + +++ A ++P LVL
Sbjct: 294 WIAPGYFSSKEHMLKNNEIYKEFNAF-KNDEIYTPSTKKGATGGIIYYEIAPTRPDLVLK 352
Query: 320 DLTEALFPTG--NYTITYFRNI 339
DL + P +Y +T+F +
Sbjct: 353 DLIKITNPEQLPDYKLTFFEKM 374
>gi|402494631|ref|ZP_10841371.1| ABC transporter substrate-binding protein [Aquimarina agarilytica
ZC1]
Length = 380
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 81/190 (42%), Gaps = 19/190 (10%)
Query: 142 EDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEFYN 201
E PL RAEWIK G + E A +N++++NYL ++A T+ KP + Y
Sbjct: 191 ESHPLGRAEWIKVFGYLFDKEKEAISYFNSIEKNYLEGKKLAQAITQ--KPTILSGNMYK 248
Query: 202 GVWSFT-KEAFKLKYVEDAGGE---NVDSSINKMTYNISNSDDLEQLHAILCTVDVVIDG 257
VW ++ K + DAGG+ D++ + N + D Q AI I G
Sbjct: 249 DVWYVPGGNSYAAKLIHDAGGDYLWKTDTNTGSLALNFESVYDKAQHAAIW------IGG 302
Query: 258 TYTLEPANYTQSTFLENIDAADKSCFAFLTNQSLWRFDKRNQNSLALDWFDGAVSQPQLV 317
N+T + L N + + F + Q ++ D + + + +++ + V
Sbjct: 303 ------GNFTSTKALGNFE-EKYTLFDAYSQQQIFSKDIKKGATGGILYYEQGSLRADWV 355
Query: 318 LADLTEALFP 327
L DL + P
Sbjct: 356 LLDLIKIFHP 365
>gi|294055306|ref|YP_003548964.1| periplasmic binding protein [Coraliomargarita akajimensis DSM
45221]
gi|293614639|gb|ADE54794.1| periplasmic binding protein [Coraliomargarita akajimensis DSM
45221]
Length = 365
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 84/191 (43%), Gaps = 17/191 (8%)
Query: 140 FGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEF 199
F E+ PL RAEW+ FL F A+ A Q YN + + Y L+ + K +P V
Sbjct: 174 FMEEHPLGRAEWMCFLAAFFQADDEAQQHYNHIADRYETLSASISDIDK--RPTVFASAP 231
Query: 200 YNGVWSF-TKEAFKLKYVEDAGGENVDSSINKMTYNISNSDDLEQLHAILCTVDVVIDGT 258
Y+G+W + +++ + + DAGG+ + K NI + L A +
Sbjct: 232 YSGIWHMPSGDSYTAQLIHDAGGDYLWKE-RKTGGNIPLDTETVFLRA--------ANAD 282
Query: 259 YTLEPANYTQSTFLENIDAADKSCFAFLTNQ--SLWRFDKRNQNSLALDWFDGAVSQPQL 316
+ + P++Y L+ + AADK F + ++ K+ ++ + QP
Sbjct: 283 FWINPSHYRT---LDALYAADKRFNLFKAAKLGKVYNNSKQTTERGGNPIWEKGIVQPHN 339
Query: 317 VLADLTEALFP 327
+LADL L P
Sbjct: 340 ILADLITILHP 350
>gi|427737169|ref|YP_007056713.1| Fe3+-hydroxamate ABC transporter substrate-binding protein
[Rivularia sp. PCC 7116]
gi|427372210|gb|AFY56166.1| ABC-type Fe3+-hydroxamate transport system, periplasmic component
[Rivularia sp. PCC 7116]
Length = 395
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 80/347 (23%), Positives = 140/347 (40%), Gaps = 47/347 (13%)
Query: 8 VEDAQNFHIYYGQTFKVI------KNAIDGRSYLLIQNNSRMAARTKYCTARIKSFVIPM 61
++ A F + Y +K++ K+A Y+L++ + A K + IP+
Sbjct: 54 IKYATGFSVEYKNNYKIVTVKNPWKDAKTSFKYVLVECGTPAPAGFK----ETQVITIPI 109
Query: 62 SNY-SVDTDFFPG--------KLLGLLSSMKGMTSE---SVASGCVLKLYQGGEIGLVNK 109
+ S+ T P KL+G+ + K TSE + +G + +L + + +
Sbjct: 110 NTVASLSTTHLPHLAKLEVVDKLVGVSNHKKVNTSEVVEKIKAGKIAELGNNVNVERLLE 169
Query: 110 SEPLQFSQYAAHFTTDSDQPQ----ACNFANFAPFGEDGPLRRAEWIKFLGIFANAEARA 165
P + + P+ A A + E+ PL RAEW+KF F N E A
Sbjct: 170 LNPDLVTTFGTGNPQTDSHPKLLEAGLKVAINAEYMENTPLGRAEWLKFTSTFFNKEDIA 229
Query: 166 NQVYNAVKENYLCLTRVAAGKTKPFK--PIVAWMEFYNGVWSFTK-EAFKLKYVEDAGGE 222
+ + + Y + A KTK K P V + G W +++ KY+ DAG E
Sbjct: 230 EKEFGEIASKY----QEIATKTKTIKKRPKVFTGFNFKGTWYVPGCQSYAAKYLADAGAE 285
Query: 223 NVDSSINKMTYNISNSDDLEQLHAILCTVDVVIDGTYTLEPANYTQSTFLENIDAADK-- 280
+ S Y+ S E + T D Y L + QS L+++ AD
Sbjct: 286 LLCSE----NYSGSTPSSFEDVFERAATAD------YWLNVSQSWQS--LKDVITADSRY 333
Query: 281 SCFAFLTNQSLWRFDKRNQNSLALDWFDGAVSQPQLVLADLTEALFP 327
S F + +++ + R + D+++ +S P ++L DL + P
Sbjct: 334 SDFQAVKKGNIFNNNARLNGNGGNDYWEAGISNPDVILNDLIKIFHP 380
>gi|427422283|ref|ZP_18912466.1| ABC-type Fe3+-hydroxamate transport system, periplasmic component
[Leptolyngbya sp. PCC 7375]
gi|425758160|gb|EKU99014.1| ABC-type Fe3+-hydroxamate transport system, periplasmic component
[Leptolyngbya sp. PCC 7375]
Length = 424
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 90/204 (44%), Gaps = 20/204 (9%)
Query: 142 EDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEFYN 201
E+ PL RAEW+ F +F N EA+A QV+ + Y L + AG + +P V Y
Sbjct: 233 ENSPLGRAEWLLFTALFFNQEAKAQQVFTDISTEYESLVELTAGLSD--RPTVFSGFSYE 290
Query: 202 GVWSFT-KEAFKLKYVEDAGGENVDSSINKMTYNISNSDDLEQLHAILCTVDVVIDGTYT 260
G W +++ + ++DAG + N+ T I D E + T DV +
Sbjct: 291 GTWYLPGGKSYAAQLLKDAGSAYLWEE-NESTVTIPL--DFESVVDQAATADVWV----- 342
Query: 261 LEPANYTQSTF-LENIDAADKSC--FAFLTNQSLWRFDKRNQNSLALDWFDGAVSQPQLV 317
N +Q F + A D F +++ + R ++ D+++ +P L+
Sbjct: 343 ----NVSQDWFSYSDAIATDPRYGNFDAFKQDNVFNNNVRINDTGGNDYWESGAVKPHLL 398
Query: 318 LADLTEALFPT--GNYTITYFRNI 339
LADL + P ++ + Y++ +
Sbjct: 399 LADLVKIFHPQLLPDHELVYYQKL 422
>gi|383117440|ref|ZP_09938184.1| hypothetical protein BSHG_0435 [Bacteroides sp. 3_2_5]
gi|251947234|gb|EES87516.1| hypothetical protein BSHG_0435 [Bacteroides sp. 3_2_5]
Length = 379
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 93/200 (46%), Gaps = 19/200 (9%)
Query: 142 EDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEFYN 201
E L RAEWIKF+G F + E A+ +++ + E Y + + A + + P + + Y
Sbjct: 188 EKSILGRAEWIKFIGAFFDKEKLADSIFSQIAEQYNEIKKKA--EKLSYAPSILSGQDYR 245
Query: 202 GVWSF-TKEAFKLKYVEDAGGENVDSSINKMTYNISNSDDLEQLHAILCTVDVVIDGTYT 260
G WS + ++ + DAG ++ ++ +IS+S + +H D+ +
Sbjct: 246 GTWSMPSGRSYNAQLFRDAGANYYYANDTTVSGSISSSIEEALIH--FNQADIWVG---- 299
Query: 261 LEPANYTQSTFLENIDAADK--SCFAFLTNQSLWRFDKRNQNSLALDWFDGAVSQPQLVL 318
Q+ LE++ D F N +++ +KR + D+++ V++P L+L
Sbjct: 300 ------VQANTLEDLGKMDSKYKLFKSYKNGNVYHINKRTNITGGNDYWESGVARPDLLL 353
Query: 319 ADLTEALFPT--GNYTITYF 336
D+ + + P+ Y +TY
Sbjct: 354 NDMIKIIHPSLLPEYELTYM 373
>gi|291514023|emb|CBK63233.1| ABC-type Fe3+-hydroxamate transport system, periplasmic component
[Alistipes shahii WAL 8301]
Length = 381
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 89/196 (45%), Gaps = 14/196 (7%)
Query: 134 FANFAPFGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCL-TRVAAGKTKPFKP 192
F + E+ PL +AEW+ + ++ + V+ V E Y L +VAA +K P
Sbjct: 181 FCYIGEYLEESPLGKAEWLVAIAEITDSREKGEAVFEPVPERYDALRAKVAAATSK--HP 238
Query: 193 IVAWMEFYNGVWSF-TKEAFKLKYVEDAGGENVDSSINKMTYNISNSDDLEQLHAILCTV 251
V Y G W + E++ + + DAGG+ + K T N S DLE+ + +
Sbjct: 239 KVMINTPYAGSWFMASTESYVARLIADAGGDYI---YKKNTSNRSLPIDLEEAYMLTAQA 295
Query: 252 DVVIDGTYTLEPANYTQSTFLENIDAADKSCFAFLTNQSLWRFDKRNQNSLALDWFDGAV 311
D+ ++ + +S F + A+ C + N +++ +KR + D+++ V
Sbjct: 296 DMWLNAG-SAASLGELKSQFPK---FANTRC---VRNGAVYNCNKRLNAAGGNDYWESGV 348
Query: 312 SQPQLVLADLTEALFP 327
+P +VL DL + P
Sbjct: 349 VRPDVVLHDLIAIMHP 364
>gi|390947460|ref|YP_006411220.1| Fe3+-hydroxamate ABC transporter periplasmic protein [Alistipes
finegoldii DSM 17242]
gi|390424029|gb|AFL78535.1| ABC-type Fe3+-hydroxamate transport system, periplasmic component
[Alistipes finegoldii DSM 17242]
Length = 381
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 89/196 (45%), Gaps = 14/196 (7%)
Query: 134 FANFAPFGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCL-TRVAAGKTKPFKP 192
F + E+ PL +AEW+ + ++ + V+ V E Y L +VAA +K P
Sbjct: 181 FCYIGEYLEESPLGKAEWLVAIAEITDSREKGEAVFEPVPERYDALRAKVAAATSK--HP 238
Query: 193 IVAWMEFYNGVWSF-TKEAFKLKYVEDAGGENVDSSINKMTYNISNSDDLEQLHAILCTV 251
V Y G W + E++ + + DAGG+ + K T N S DLE+ + +
Sbjct: 239 KVMINTPYAGSWFMASTESYVARLIADAGGDYI---YKKNTSNRSLPIDLEEAYMLTAQA 295
Query: 252 DVVIDGTYTLEPANYTQSTFLENIDAADKSCFAFLTNQSLWRFDKRNQNSLALDWFDGAV 311
D+ ++ + +S F + A+ C + N +++ +KR + D+++ V
Sbjct: 296 DMWLNAG-SAASLGELKSQFPK---FANTRC---VRNGAVYNCNKRLNAAGGNDYWESGV 348
Query: 312 SQPQLVLADLTEALFP 327
+P +VL DL + P
Sbjct: 349 VRPDVVLHDLIAIMHP 364
>gi|89891465|ref|ZP_01202970.1| putative iron(III) ABC transporter periplasmic iron-binding protein
[Flavobacteria bacterium BBFL7]
gi|89516239|gb|EAS18901.1| putative iron(III) ABC transporter periplasmic iron-binding protein
[Flavobacteria bacterium BBFL7]
Length = 385
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 84/189 (44%), Gaps = 18/189 (9%)
Query: 142 EDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEFYN 201
E PL +AEWIK G+ E AN+++ +++ YL ++A P ++A + +
Sbjct: 196 EKHPLGKAEWIKLFGVLYGKEKEANRIFKEIEKEYLETKKLAQAFESP--SVIAGATWKD 253
Query: 202 GVWSFTKEAFKLKYVEDAGGENVDSS---INKMTYNISNSDDLEQLHAILCTVDVVIDGT 258
+ +++ K + DA G+ V S+ ++YN+ E++ D+ I
Sbjct: 254 TWYLPYGNSWQGKIIADAHGDYVYSNTTGTGSLSYNV------ERVLTDAHNADIWI--- 304
Query: 259 YTLEPANYTQSTFLENIDAADKSCFAFLTNQSLWRFDKRNQNSLALDWFDGAVSQPQLVL 318
P YT ++ D + S F N+ ++ F + +++ A +P LVL
Sbjct: 305 ---APGQYTSYKAMKE-DNSAYSQFDAFKNRKVYTFALNVGARGGVTYYEEASMRPDLVL 360
Query: 319 ADLTEALFP 327
DL + L P
Sbjct: 361 KDLVKILHP 369
>gi|317478998|ref|ZP_07938143.1| iron complex transport system substrate-binding protein
[Bacteroides sp. 4_1_36]
gi|316904855|gb|EFV26664.1| iron complex transport system substrate-binding protein
[Bacteroides sp. 4_1_36]
Length = 389
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 91/212 (42%), Gaps = 41/212 (19%)
Query: 140 FGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEF 199
+ E PL +AEWIKF+G+F E AN+ + A+++ Y L +AA K +P+V E
Sbjct: 200 YKEMTPLGQAEWIKFIGMFIGQEVEANEKFAAIEKRYNELKELAANVKK--RPMVFSGEI 257
Query: 200 YNGVW------SFTKEAFK-------LKYVEDAGGENVDSSINKMTYNISNSDDLEQLHA 246
G W SF E F+ LK +GG +D + Y+ + S D ++
Sbjct: 258 RGGNWYAVGGKSFLAELFRDAGADYFLKDDPRSGGVTLDF---ETVYSQAESADYWRIVN 314
Query: 247 ILCTVDVVIDGTYTLEPANYTQSTFLENIDAADKSCFAFLTNQSLWRFDKRNQNSLALDW 306
DGT+T + L+++D AF ++ N +
Sbjct: 315 -------SYDGTFTYDA--------LKSLDPRYADFRAFREKGVVY------CNMREKPF 353
Query: 307 FDGAVSQPQLVLADLTEALFP--TGNYTITYF 336
++ QP++VL DL A P +Y TY+
Sbjct: 354 YESMPMQPEIVLEDLIHAFHPDLLPDYKPTYY 385
>gi|325285070|ref|YP_004260860.1| ABC transporter periplasmic protein [Cellulophaga lytica DSM 7489]
gi|324320524|gb|ADY27989.1| ABC-type transporter, periplasmic subunit [Cellulophaga lytica DSM
7489]
Length = 384
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 94/204 (46%), Gaps = 25/204 (12%)
Query: 142 EDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEFYN 201
E+ PL +AEWIKF F NAEA+A+ ++ ++ +Y +A T +P V Y
Sbjct: 195 EETPLGKAEWIKFFAPFFNAEAKADSIFKTIETDYNNAKALAKKATN--RPSVLTGGLYK 252
Query: 202 GVWSFT-KEAFKLKYVEDAGGENVDSSINKMTYNISNSDDLEQLHAILCTVDVVID---- 256
+W +++ ++++DA + S DL++ + +++ V D
Sbjct: 253 DLWHVAGGKSWMAQFLKDANANYLWS-------------DLQETGGVGLSIESVFDKAGK 299
Query: 257 GTYTLEPANYTQSTFLENIDAADK-SCFAFLTNQSLWRFDKRNQNSLALDWFDGAVSQPQ 315
+ + P+ + S++ E +++ + F N+ ++ + + +F+ A ++P
Sbjct: 300 ADFWISPS--SNSSYKEVAESSQHYTQFDAYKNKKIYTITLVKGETGGVLFFELAPNRPD 357
Query: 316 LVLADLTEALFPT--GNYTITYFR 337
LVL DL P NY T+F+
Sbjct: 358 LVLKDLISIFHPEVLPNYQTTFFK 381
>gi|270296991|ref|ZP_06203190.1| conserved hypothetical protein [Bacteroides sp. D20]
gi|270272978|gb|EFA18841.1| conserved hypothetical protein [Bacteroides sp. D20]
Length = 389
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 91/212 (42%), Gaps = 41/212 (19%)
Query: 140 FGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEF 199
+ E PL +AEWIKF+G+F E AN+ + A+++ Y L +AA K +P+V E
Sbjct: 200 YKEMTPLGQAEWIKFIGMFIGQEVEANEKFAAIEKRYNELKELAANVKK--RPMVFSGEI 257
Query: 200 YNGVW------SFTKEAFK-------LKYVEDAGGENVDSSINKMTYNISNSDDLEQLHA 246
G W SF E F+ LK +GG +D + Y+ + S D ++
Sbjct: 258 RGGNWYAVGGKSFLAELFRDAGADYFLKDDPRSGGVTLDF---ETVYSQAESADYWRIVN 314
Query: 247 ILCTVDVVIDGTYTLEPANYTQSTFLENIDAADKSCFAFLTNQSLWRFDKRNQNSLALDW 306
DGT+T + L+++D AF ++ N +
Sbjct: 315 -------SYDGTFTYDA--------LKSLDPRYADFRAFREKGVVY------CNMREKPF 353
Query: 307 FDGAVSQPQLVLADLTEALFP--TGNYTITYF 336
++ QP++VL DL A P +Y TY+
Sbjct: 354 YESMPMQPEIVLEDLIHAFHPDLLPDYKPTYY 385
>gi|423306502|ref|ZP_17284501.1| hypothetical protein HMPREF1072_03441 [Bacteroides uniformis
CL03T00C23]
gi|423308909|ref|ZP_17286899.1| hypothetical protein HMPREF1073_01649 [Bacteroides uniformis
CL03T12C37]
gi|392678682|gb|EIY72087.1| hypothetical protein HMPREF1072_03441 [Bacteroides uniformis
CL03T00C23]
gi|392686126|gb|EIY79433.1| hypothetical protein HMPREF1073_01649 [Bacteroides uniformis
CL03T12C37]
Length = 389
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 91/212 (42%), Gaps = 41/212 (19%)
Query: 140 FGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEF 199
+ E PL +AEWIKF+G+F E AN+ + A+++ Y L +AA K +P+V E
Sbjct: 200 YKEMTPLGQAEWIKFIGMFIGREVEANEKFAAIEKRYNELKELAANVKK--RPMVFSGEI 257
Query: 200 YNGVW------SFTKEAFK-------LKYVEDAGGENVDSSINKMTYNISNSDDLEQLHA 246
G W SF E F+ LK +GG +D + Y+ + S D ++
Sbjct: 258 RGGNWYAVGGKSFLAELFRDAGADYFLKDDPRSGGVTLDF---ETVYSQAESADYWRIVN 314
Query: 247 ILCTVDVVIDGTYTLEPANYTQSTFLENIDAADKSCFAFLTNQSLWRFDKRNQNSLALDW 306
DGT+T + L+++D AF ++ N +
Sbjct: 315 -------SYDGTFTYDA--------LKSLDPRYADFRAFREKGVVY------CNMREKPF 353
Query: 307 FDGAVSQPQLVLADLTEALFP--TGNYTITYF 336
++ QP++VL DL A P +Y TY+
Sbjct: 354 YESMPMQPEIVLEDLIHAFHPDLLPDYKPTYY 385
>gi|160890495|ref|ZP_02071498.1| hypothetical protein BACUNI_02937 [Bacteroides uniformis ATCC 8492]
gi|156860227|gb|EDO53658.1| periplasmic binding protein [Bacteroides uniformis ATCC 8492]
Length = 322
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 90/210 (42%), Gaps = 37/210 (17%)
Query: 140 FGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEF 199
+ E PL +AEWIKF+G+F E AN+ + A+++ Y L +AA K +P+V E
Sbjct: 133 YKEMTPLGQAEWIKFIGMFIGQEVEANEKFAAIEKRYNELKELAANVKK--RPMVFSGEI 190
Query: 200 YNGVW------SFTKEAFKLKYVEDAGGENVDSSINKMTYNISNSDDLEQLHAILCTVDV 253
G W SF E F+ DAG D + + + D E +++ + D
Sbjct: 191 RGGNWYAVGGKSFLAELFR-----DAGA---DYFLKDDPRSGGVTLDFETVYSQAESADY 242
Query: 254 -----VIDGTYTLEPANYTQSTFLENIDAADKSCFAFLTNQSLWRFDKRNQNSLALDWFD 308
DGT+T + L+++D AF ++ N +++
Sbjct: 243 WRIVNSYDGTFTYDA--------LKSLDPRYADFRAFREKGVVY------CNMREKPFYE 288
Query: 309 GAVSQPQLVLADLTEALFP--TGNYTITYF 336
QP++VL DL A P +Y TY+
Sbjct: 289 SMPMQPEIVLEDLIHAFHPDLLPDYKPTYY 318
>gi|329962891|ref|ZP_08300756.1| periplasmic binding protein [Bacteroides fluxus YIT 12057]
gi|328529306|gb|EGF56222.1| periplasmic binding protein [Bacteroides fluxus YIT 12057]
Length = 389
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 92/215 (42%), Gaps = 41/215 (19%)
Query: 140 FGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEF 199
+ E PL +AEWIKF+G+F EA AN + A+++ Y L +AA K +P+V E
Sbjct: 200 YKEMTPLGQAEWIKFIGMFIGQEAEANAKFAAIEKRYNELKELAANVGK--RPVVFSGEI 257
Query: 200 YNGVW------SFTKEAFK-------LKYVEDAGGENVDSSINKMTYNISNSDDLEQLHA 246
G W SF + F+ LK +GG +D + YN + S D ++
Sbjct: 258 RGGNWYAVGGKSFLAQLFRDAGADYFLKDDPRSGGVTLDF---ETVYNQAESADFWRIVN 314
Query: 247 ILCTVDVVIDGTYTLEPANYTQSTFLENIDAADKSCFAFLTNQSLWRFDKRNQNSLALDW 306
DGT++ + L+++D AF ++ N +
Sbjct: 315 -------SYDGTFSYDA--------LKSLDPRYADFRAFREKGVVY------CNMREKPF 353
Query: 307 FDGAVSQPQLVLADLTEALFP--TGNYTITYFRNI 339
++ +P++VL DL A P +Y TY+ +
Sbjct: 354 YESMPMEPEIVLEDLIHAFHPDLLPDYKPTYYERL 388
>gi|453362315|dbj|GAC81729.1| hypothetical protein GM1_043_00020 [Gordonia malaquae NBRC 108250]
Length = 397
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 80/349 (22%), Positives = 129/349 (36%), Gaps = 43/349 (12%)
Query: 4 DISKVEDAQNFHIYYGQTFKV--IKNAIDGR---SYLLIQNNSRMAARTKYCTARIKSFV 58
D S + DA I Y ++++V +K G SY+L++ + A + A
Sbjct: 50 DKSTISDASGLAIEYHKSYQVLTVKEPSPGARPVSYVLVRCGAP-APKLDGALAEAPQVQ 108
Query: 59 IPM-SNYSVDTDFFPG-KLLGLLSSMKGMTSESVASGCVLK-------LYQGGEIGLVNK 109
+P+ S YS T P LG ++ G++S S ++ + Q + G+ N
Sbjct: 109 VPIRSMYSGSTTHLPAMAALGAADTVTGVSSTDYVSTPEIRARIDEGDVVQYADAGVPN- 167
Query: 110 SEPLQFSQYAAHFTTDSDQPQACNFANF-------APFGEDGPLRRAEWIKFLGIFANAE 162
E + Q + ++ P A + E PL RAEWIKF E
Sbjct: 168 VEKVIAGQPDVLVSDGNEDPSYAKLRQAGVPVLANADWLEASPLGRAEWIKFFAALTGTE 227
Query: 163 ARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEFYNGVWSFTKEA-FKLKYVEDAGG 221
+A V++ +K Y T+V K V NG W+ + + V DAGG
Sbjct: 228 TKAADVFSTLKSEY---TKVQQKTANAPKTDVLLGGIENGAWTLAAGGNYFGRLVRDAGG 284
Query: 222 E---NVDSSINKMTYNISNSDDLEQLHAILCTVDVVIDGTYTLEPANYTQSTFLENIDAA 278
+ D S + +I + D + D+ + L + F + A
Sbjct: 285 DYPWAADPSTGSLRLSIESVIDKSRNADAWLLSDMTVASLADLYKQDERYRVFAQPAKRA 344
Query: 279 DKSCFAFLTNQSLWRFDKRNQNSLALDWFDGAVSQPQLVLADLTEALFP 327
W K + D+++ V +P LVLADL L P
Sbjct: 345 -------------WNATKAMSATGGNDYWERGVLRPDLVLADLAAILHP 380
>gi|254446492|ref|ZP_05059968.1| hypothetical protein VDG1235_4743 [Verrucomicrobiae bacterium
DG1235]
gi|198260800|gb|EDY85108.1| hypothetical protein VDG1235_4743 [Verrucomicrobiae bacterium
DG1235]
Length = 367
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 86/195 (44%), Gaps = 19/195 (9%)
Query: 138 APFGEDGPLRRAEWIKFLGIF--ANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVA 195
A + E PL R EWIKF+ F + EA+A +++ V + Y L +A G K +P V
Sbjct: 172 AGYMERHPLARTEWIKFVAAFYDDDTEAKAEAIFDRVADRYEALVELAGGAEK--RPTVF 229
Query: 196 WMEFYNGVWSFT-KEAFKLKYVEDAGGENVDSSINKMTYNISNSDDLEQLHAILCTVDVV 254
+ G W +++ ++ AG E + + ++ S DLE + DV
Sbjct: 230 ASAPFGGTWHVPGGQSYTATALDHAGAEYLWAEVDSRG---SVPLDLEVIFQKAAEADVW 286
Query: 255 IDGTYTLEPANYTQSTFLENIDAADK--SCFAFLTNQSLWRFDKRNQNSLALDWFDGAVS 312
I+ P++Y + ++ +D+ + F L +++ R D F+ VS
Sbjct: 287 IN------PSHYDS---VRDLLGSDERFAGFRALREGNVFNNTVRVNEHGGNDIFERGVS 337
Query: 313 QPQLVLADLTEALFP 327
P VLADL + P
Sbjct: 338 HPDEVLADLIKIFHP 352
>gi|423281608|ref|ZP_17260493.1| hypothetical protein HMPREF1204_00031 [Bacteroides fragilis HMW
615]
gi|404582649|gb|EKA87340.1| hypothetical protein HMPREF1204_00031 [Bacteroides fragilis HMW
615]
Length = 379
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 93/200 (46%), Gaps = 19/200 (9%)
Query: 142 EDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEFYN 201
E L RAEWIKF+G F + E A+ +++ + E Y + + A + + P + + Y
Sbjct: 188 EKSILGRAEWIKFIGAFFDKEKLADSIFSQIAEQYNEIKKKA--EKLSYAPSILSGQDYR 245
Query: 202 GVWSF-TKEAFKLKYVEDAGGENVDSSINKMTYNISNSDDLEQLHAILCTVDVVIDGTYT 260
G WS + ++ + DAG ++ ++ +IS+S + +H D+ +
Sbjct: 246 GTWSMPSGRSYNAQLFRDAGANYYYANDTTVSGSISSSIEEALIH--FNQADIWVG---- 299
Query: 261 LEPANYTQSTFLENIDAADK--SCFAFLTNQSLWRFDKRNQNSLALDWFDGAVSQPQLVL 318
Q+ LE++ D F N +++ +KR + D+++ V++P L+L
Sbjct: 300 ------VQANTLEDLGKMDPKYKLFKSYKNGNVYHINKRTNITGGNDYWESGVARPDLLL 353
Query: 319 ADLTEALFPT--GNYTITYF 336
D+ + + P+ Y +TY
Sbjct: 354 NDMIKIIHPSLLPEYELTYM 373
>gi|60680711|ref|YP_210855.1| iron-related ABC transport periplasmic binding protein [Bacteroides
fragilis NCTC 9343]
gi|60492145|emb|CAH06908.1| putative iron-related ABC transport periplasmic binding protein
[Bacteroides fragilis NCTC 9343]
Length = 380
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 93/200 (46%), Gaps = 19/200 (9%)
Query: 142 EDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEFYN 201
E L RAEWIKF+G F + E A+ +++ + E Y + + A + + P + + Y
Sbjct: 189 EKSILGRAEWIKFIGAFFDKEKLADSIFSQIAEQYNEIKKKA--EKLSYAPSILSGQDYR 246
Query: 202 GVWSF-TKEAFKLKYVEDAGGENVDSSINKMTYNISNSDDLEQLHAILCTVDVVIDGTYT 260
G WS + ++ + DAG ++ ++ +IS+S + +H D+ +
Sbjct: 247 GTWSMPSGRSYNAQLFRDAGANYYYANDTTVSGSISSSIEEALIH--FNQADIWVG---- 300
Query: 261 LEPANYTQSTFLENIDAADK--SCFAFLTNQSLWRFDKRNQNSLALDWFDGAVSQPQLVL 318
Q+ LE++ D F N +++ +KR + D+++ V++P L+L
Sbjct: 301 ------VQANTLEDLGKMDPKYKLFKSYKNGNVYHINKRTNITGGNDYWESGVARPDLLL 354
Query: 319 ADLTEALFPT--GNYTITYF 336
D+ + + P+ Y +TY
Sbjct: 355 NDMIKIIHPSLLPEYELTYM 374
>gi|375357574|ref|YP_005110346.1| putative iron-related ABC transport periplasmic binding protein
[Bacteroides fragilis 638R]
gi|301162255|emb|CBW21800.1| putative iron-related ABC transport periplasmic binding protein
[Bacteroides fragilis 638R]
Length = 380
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 93/200 (46%), Gaps = 19/200 (9%)
Query: 142 EDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEFYN 201
E L RAEWIKF+G F + E A+ +++ + E Y + + A + + P + + Y
Sbjct: 189 EKSILGRAEWIKFIGAFFDKEKLADSIFSQIAEQYNEIKKKA--EKLSYSPSILSGQDYR 246
Query: 202 GVWSF-TKEAFKLKYVEDAGGENVDSSINKMTYNISNSDDLEQLHAILCTVDVVIDGTYT 260
G WS + ++ + DAG ++ ++ +IS+S + +H D+ +
Sbjct: 247 GTWSMPSGRSYNAQLFRDAGANYYYANDTTVSGSISSSIEEALIH--FNQADIWVG---- 300
Query: 261 LEPANYTQSTFLENIDAADK--SCFAFLTNQSLWRFDKRNQNSLALDWFDGAVSQPQLVL 318
Q+ LE++ D F N +++ +KR + D+++ V++P L+L
Sbjct: 301 ------VQANTLEDLGKMDPKYKLFKSYKNGNVYHINKRTNITGGNDYWESGVARPDLLL 354
Query: 319 ADLTEALFPT--GNYTITYF 336
D+ + + P+ Y +TY
Sbjct: 355 NDMIKIVHPSLLPEYELTYM 374
>gi|167762291|ref|ZP_02434418.1| hypothetical protein BACSTE_00644 [Bacteroides stercoris ATCC
43183]
gi|167699934|gb|EDS16513.1| hypothetical protein BACSTE_00644 [Bacteroides stercoris ATCC
43183]
Length = 388
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 90/208 (43%), Gaps = 27/208 (12%)
Query: 140 FGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEF 199
+ E PL +AEWIKF+G+F EA AN + +++ Y L +AAG K +P+V E
Sbjct: 199 YKEMTPLGQAEWIKFIGMFIGREAEANARFAGIEKRYNELKELAAGVKK--RPVVFSGEM 256
Query: 200 YNGVW-SFTKEAFKLKYVEDAGGENVDSSINKMTYNISNSDDLEQLHAILCTVDV----- 253
G W + ++F + DAG D + + + D E +++ + D
Sbjct: 257 RGGNWYAVGGKSFLAELFRDAGA---DYFLKDDPRSGGVTLDFETVYSRAESADYWRIVN 313
Query: 254 VIDGTYTLEPANYTQSTFLENIDAADKSCFAFLTNQSLWRFDKRNQNSLALDWFDGAVSQ 313
DG ++ + L+++D AF ++ N +++ Q
Sbjct: 314 SYDGIFSYDA--------LKSLDPRYADFRAFREKGVIY------CNMREKPFYESMPMQ 359
Query: 314 PQLVLADLTEALFP--TGNYTITYFRNI 339
P++VL DL A P +Y TY+ +
Sbjct: 360 PEVVLEDLIHAFHPDLLPDYKPTYYERL 387
>gi|334365371|ref|ZP_08514331.1| ABC transporter, substrate-binding protein [Alistipes sp. HGB5]
gi|313158483|gb|EFR57878.1| ABC transporter, substrate-binding protein [Alistipes sp. HGB5]
Length = 381
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 87/202 (43%), Gaps = 26/202 (12%)
Query: 134 FANFAPFGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCL-TRVAAGKTKPFKP 192
F + E+ PL +AEW+ + ++ + V+ V E Y L +VAA +K P
Sbjct: 181 FCYIGEYLEESPLGKAEWLVAIAEITDSREKGEAVFEPVPERYDALRAKVAAATSK--HP 238
Query: 193 IVAWMEFYNGVWSF-TKEAFKLKYVEDAGGENVDSSINKMTYNISNSDDLEQLHAILCTV 251
V Y G W + E++ + + DAGG+ + K T N S DLE+ + +
Sbjct: 239 KVMINTPYAGSWFMASTESYVARLIADAGGDYI---YKKNTSNRSLPIDLEEAYMLTAQA 295
Query: 252 DVVIDGTYTLEPANYTQSTFLENIDAADKSCFAFLTNQ------SLWRFDKRNQNSLALD 305
D+ + N + L + KS F TN +++ +KR + D
Sbjct: 296 DMWL---------NAGSAASLGEL----KSQFPKFTNTRCVRNGAVYNCNKRLNVAGGND 342
Query: 306 WFDGAVSQPQLVLADLTEALFP 327
+++ V QP +VL DL + P
Sbjct: 343 YWESGVVQPDVVLHDLIAIMHP 364
>gi|423258485|ref|ZP_17239408.1| hypothetical protein HMPREF1055_01685 [Bacteroides fragilis
CL07T00C01]
gi|423264544|ref|ZP_17243547.1| hypothetical protein HMPREF1056_01234 [Bacteroides fragilis
CL07T12C05]
gi|387777185|gb|EIK39284.1| hypothetical protein HMPREF1055_01685 [Bacteroides fragilis
CL07T00C01]
gi|392705632|gb|EIY98760.1| hypothetical protein HMPREF1056_01234 [Bacteroides fragilis
CL07T12C05]
Length = 392
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 93/200 (46%), Gaps = 19/200 (9%)
Query: 142 EDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEFYN 201
E L RAEWIKF+G F + E A+ +++ + E Y + + A + + P + + Y
Sbjct: 201 EKSILGRAEWIKFIGAFFDKEKLADSIFSQIAEQYNEIKKKA--EKLSYAPSILSGQDYR 258
Query: 202 GVWSF-TKEAFKLKYVEDAGGENVDSSINKMTYNISNSDDLEQLHAILCTVDVVIDGTYT 260
G WS + ++ + DAG ++ ++ +IS+S + +H D+ +
Sbjct: 259 GTWSMPSGRSYNAQLFRDAGANYYYANDTTVSGSISSSIEEALIH--FNQADIWVG---- 312
Query: 261 LEPANYTQSTFLENIDAADK--SCFAFLTNQSLWRFDKRNQNSLALDWFDGAVSQPQLVL 318
Q+ LE++ D F N +++ +KR + D+++ V++P L+L
Sbjct: 313 ------VQANTLEDLGKMDPKYKLFKSYKNGNVYHINKRTNITGGNDYWESGVARPDLLL 366
Query: 319 ADLTEALFPT--GNYTITYF 336
D+ + + P+ Y +TY
Sbjct: 367 NDMIKIVHPSLLPEYELTYM 386
>gi|336408744|ref|ZP_08589233.1| hypothetical protein HMPREF1018_01248 [Bacteroides sp. 2_1_56FAA]
gi|335933891|gb|EGM95889.1| hypothetical protein HMPREF1018_01248 [Bacteroides sp. 2_1_56FAA]
Length = 379
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 93/200 (46%), Gaps = 19/200 (9%)
Query: 142 EDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEFYN 201
E L RAEWIKF+G F + E A+ +++ + E Y + + A + + P + + Y
Sbjct: 188 EKSILGRAEWIKFIGAFFDKEKLADSIFSQIAEQYNEIKKKA--EKLSYAPSILSGQDYR 245
Query: 202 GVWSF-TKEAFKLKYVEDAGGENVDSSINKMTYNISNSDDLEQLHAILCTVDVVIDGTYT 260
G WS + ++ + DAG ++ ++ +IS+S + +H D+ +
Sbjct: 246 GTWSMPSGRSYNAQLFRDAGANYYYANDTTVSGSISSSIEEALIH--FNQADIWVG---- 299
Query: 261 LEPANYTQSTFLENIDAADK--SCFAFLTNQSLWRFDKRNQNSLALDWFDGAVSQPQLVL 318
Q+ LE++ D F N +++ +KR + D+++ V++P L+L
Sbjct: 300 ------VQANTLEDLGKMDPKYKLFKSYKNGNVYHINKRTNITGGNDYWESGVARPDLLL 353
Query: 319 ADLTEALFPT--GNYTITYF 336
D+ + + P+ Y +TY
Sbjct: 354 NDMIKIVHPSLLPEYELTYM 373
>gi|53712512|ref|YP_098504.1| iron(III) ABC transporter periplasmic iron-binding protein
[Bacteroides fragilis YCH46]
gi|265762675|ref|ZP_06091243.1| iron(III) ABC transporter periplasmic iron-binding protein
[Bacteroides sp. 2_1_16]
gi|52215377|dbj|BAD47970.1| iron(III) ABC transporter periplasmic iron-binding protein
[Bacteroides fragilis YCH46]
gi|263255283|gb|EEZ26629.1| iron(III) ABC transporter periplasmic iron-binding protein
[Bacteroides sp. 2_1_16]
Length = 379
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 93/200 (46%), Gaps = 19/200 (9%)
Query: 142 EDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEFYN 201
E L RAEWIKF+G F + E A+ +++ + E Y + + A + + P + + Y
Sbjct: 188 EKSILGRAEWIKFIGAFFDKEKLADSIFSQIAEQYNEIKKKA--EKLSYAPSILSGQDYR 245
Query: 202 GVWSF-TKEAFKLKYVEDAGGENVDSSINKMTYNISNSDDLEQLHAILCTVDVVIDGTYT 260
G WS + ++ + DAG ++ ++ +IS+S + +H D+ +
Sbjct: 246 GTWSMPSGRSYNAQLFRDAGANYYYANDTTVSGSISSSIEEALIH--FNQADIWVG---- 299
Query: 261 LEPANYTQSTFLENIDAADK--SCFAFLTNQSLWRFDKRNQNSLALDWFDGAVSQPQLVL 318
Q+ LE++ D F N +++ +KR + D+++ V++P L+L
Sbjct: 300 ------VQANTLEDLGKMDPKYKLFKSYKNGNVYHINKRTNIAGGNDYWESGVARPDLLL 353
Query: 319 ADLTEALFPT--GNYTITYF 336
D+ + + P+ Y +TY
Sbjct: 354 NDMIKIVHPSLLPEYELTYM 373
>gi|149372081|ref|ZP_01891351.1| putative iron-related ABC transport periplasmic binding protein
[unidentified eubacterium SCB49]
gi|149354848|gb|EDM43410.1| putative iron-related ABC transport periplasmic binding protein
[unidentified eubacterium SCB49]
Length = 377
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 64/316 (20%), Positives = 130/316 (41%), Gaps = 41/316 (12%)
Query: 34 YLLIQNNSRMAARTKYCTARIKSFVIPMSNYSV-DTDFFPG-KLLGLLSSMKGMTSES-V 90
Y L+++ + + + A +K +P+++ V T P ++LG+ S+ G S + +
Sbjct: 67 YALVKDEASVKSLEGKYDAVVK---VPLTDIVVTSTTHIPSLEMLGVEKSLVGFPSLNYI 123
Query: 91 ASGCVLKLYQGGEIGLVNKSEPLQFS-------QYAAHFTTDSDQPQACNFANF------ 137
+S K G+I + K+E + Q F D + P
Sbjct: 124 SSQKTRKHISEGKIKELGKNESINTEMLIELNPQAVIGFGIDGNNPTFNTIEKLGTPVLY 183
Query: 138 -APFGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAW 196
A + E PL +AEWIKF G + A+ +++ ++ NY ++A KT P +
Sbjct: 184 NADWTEKHPLGKAEWIKFFGALYGKQKEADSIFSEIERNYNEAQKIA--KTATTSPTILS 241
Query: 197 MEFYNGVWSFTK-EAFKLKYVEDAGGENVDSSINKMTYNISNSDDLEQLHAILCTVDVVI 255
Y VW + +++ +++ DA G+ + D E +I ++ V+
Sbjct: 242 GAMYKDVWYMPQGDSWAAQFIADANGDYL-------------WKDSEGTGSIALNLESVL 288
Query: 256 D----GTYTLEPANYTQSTFLENIDAADKSCFAFLTNQSLWRFDKRNQNSLALDWFDGAV 311
+ + P + + L + AF N ++ F + + + +++ A
Sbjct: 289 EKGQNAQIWISPGQFKSTEQLAEMHHMYTQFDAF-KNDKVYNFTNKTGATGGVIYYELAP 347
Query: 312 SQPQLVLADLTEALFP 327
++P +VL D+ + L P
Sbjct: 348 NRPDIVLKDIIKILHP 363
>gi|329954789|ref|ZP_08295806.1| hypothetical protein HMPREF9445_00640 [Bacteroides clarus YIT
12056]
gi|328526893|gb|EGF53904.1| hypothetical protein HMPREF9445_00640 [Bacteroides clarus YIT
12056]
Length = 389
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 91/210 (43%), Gaps = 27/210 (12%)
Query: 140 FGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEF 199
+ E PL +AEWIKF+G+F EA AN + +++ Y L + AG + +P+V E
Sbjct: 199 YKEMTPLGQAEWIKFIGMFIGREAEANAGFAGIEKRYNELKELVAGVKR--RPVVFSGEM 256
Query: 200 YNGVW-SFTKEAFKLKYVEDAGGENVDSSINKMTYNISNSDDLEQLHAILCTVDV----- 253
G W + ++F + DAG D + + + D E +++ + D
Sbjct: 257 RGGNWYAVGGKSFLAELFRDAG---ADYFLKDDPRSGGVTLDFETVYSQAESADYWRIVN 313
Query: 254 VIDGTYTLEPANYTQSTFLENIDAADKSCFAFLTNQSLWRFDKRNQNSLALDWFDGAVSQ 313
DGT++ + L+++D AF ++ N +++ Q
Sbjct: 314 SYDGTFSYDA--------LKSLDPRYADFRAFREQGVIY------CNMREKPFYESMPMQ 359
Query: 314 PQLVLADLTEALFP--TGNYTITYFRNIAK 341
P++VL DL A P +Y TY+ + +
Sbjct: 360 PEVVLEDLIHAFHPDLLPDYKPTYYERLNR 389
>gi|336173148|ref|YP_004580286.1| periplasmic binding protein [Lacinutrix sp. 5H-3-7-4]
gi|334727720|gb|AEH01858.1| periplasmic binding protein [Lacinutrix sp. 5H-3-7-4]
Length = 384
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 91/207 (43%), Gaps = 27/207 (13%)
Query: 142 EDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEFYN 201
E PL +AEWIKF G N E +A+ ++N ++++Y ++A KP + +
Sbjct: 195 EKSPLAKAEWIKFFGALYNKEKQADSIFNKIEKDYTQAKKLALNAKN--KPTILSGAMHK 252
Query: 202 GVWSFTK-EAFKLKYVEDAGGENVDSSINKMTYNISNSDDLEQLHAILCTVDVVIDGTYT 260
VW + + ++++DA N SD E+ +I +VV + T
Sbjct: 253 DVWYLPNGTSTEAQFLKDANT------------NYLWSDTTEK-GSIALNFEVVYEKAKT 299
Query: 261 ----LEPANYTQSTFLENIDAADKSCFAF--LTNQSLWRFDKRNQNSLALDWFDGAVSQP 314
L P+ YT LE ++ A + F N+ ++ F + + +++ ++P
Sbjct: 300 ADLWLSPSYYTS---LEALEEASQHYTKFDAFKNKQVYSFTNTTGKNGGVLYYELGTARP 356
Query: 315 QLVLADLTEALFPT--GNYTITYFRNI 339
LVL D+ + P NY +F+ +
Sbjct: 357 DLVLKDIIKVCHPELLENYEPFFFKKL 383
>gi|441519102|ref|ZP_21000806.1| putative ABC transporter substrate-binding protein [Gordonia
hirsuta DSM 44140 = NBRC 16056]
gi|441454048|dbj|GAC58767.1| putative ABC transporter substrate-binding protein [Gordonia
hirsuta DSM 44140 = NBRC 16056]
Length = 390
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 91/209 (43%), Gaps = 28/209 (13%)
Query: 142 EDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPI-VAWMEFY 200
E PL AEWIK LG+ + A+A +V++ + Y L A K + P+ + + +
Sbjct: 201 ESDPLAIAEWIKVLGVLTDTSAKAQEVFDGIASRYTEL----AAKARGLPPVQILYGADF 256
Query: 201 NGVWSFT-KEAFKLKYVEDAGGENVDSSINKMTYNISNSDDLEQL--HAILCTVDVVIDG 257
G WS +++ + + DAGG + + +S + EQ+ A + +V D
Sbjct: 257 QGTWSVPGRDSPSGRLITDAGG----TWPWHDSPGVSVQQNFEQVLSRAGELPIWLVAD- 311
Query: 258 TYTLEPANYTQSTFLENIDAAD---KSCFAFLTNQSLWRFDKRNQNSLALDWFDGAVSQP 314
Q + ++ AD +S A T Q +W ++ D+++ ++P
Sbjct: 312 ---------NQWKTIADVTGADPRYRSLAAVSTGQ-VWNANRSMGPDGGNDFYESGSARP 361
Query: 315 QLVLADLTEALFPT--GNYTITYFRNIAK 341
LVLAD L P ++ Y+R + +
Sbjct: 362 DLVLADTVAILHPELLPDHEFVYYRELTR 390
>gi|423268894|ref|ZP_17247866.1| hypothetical protein HMPREF1079_00948 [Bacteroides fragilis
CL05T00C42]
gi|423273545|ref|ZP_17252492.1| hypothetical protein HMPREF1080_01145 [Bacteroides fragilis
CL05T12C13]
gi|392702203|gb|EIY95349.1| hypothetical protein HMPREF1079_00948 [Bacteroides fragilis
CL05T00C42]
gi|392707838|gb|EIZ00953.1| hypothetical protein HMPREF1080_01145 [Bacteroides fragilis
CL05T12C13]
Length = 379
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 92/200 (46%), Gaps = 19/200 (9%)
Query: 142 EDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEFYN 201
E L RAEWIKF+G F + E A+ +++ + E Y + + A + + P + + Y
Sbjct: 188 EKSILGRAEWIKFIGAFFDKEKLADSIFSQIAEQYNEIKKKA--EKLSYAPSILSGQDYR 245
Query: 202 GVWSF-TKEAFKLKYVEDAGGENVDSSINKMTYNISNSDDLEQLHAILCTVDVVIDGTYT 260
G WS + ++ + DAG ++ ++ +IS+S + +H D+ +
Sbjct: 246 GTWSMPSGRSYNAQLFRDAGANYYYANDTTVSGSISSSIEEALIH--FNQADIWVG---- 299
Query: 261 LEPANYTQSTFLENIDAADK--SCFAFLTNQSLWRFDKRNQNSLALDWFDGAVSQPQLVL 318
Q+ LE++ D F N +++ +KR + D+++ V++P L+L
Sbjct: 300 ------VQANTLEDLGKMDPKYKLFKSYKNGNVYHINKRTNIAGGNDYWESGVARPDLLL 353
Query: 319 ADLTEALFPT--GNYTITYF 336
D+ + + P Y +TY
Sbjct: 354 NDMIKIVHPNLLPEYELTYM 373
>gi|260063186|ref|YP_003196266.1| iron(III) ABC transporter periplasmic iron-binding protein
[Robiginitalea biformata HTCC2501]
gi|88783280|gb|EAR14452.1| iron(III) ABC transporter, periplasmic iron-binding protein
[Robiginitalea biformata HTCC2501]
Length = 385
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 85/203 (41%), Gaps = 17/203 (8%)
Query: 142 EDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEFYN 201
E PL +AEWIKF G+ + A Q + V+ Y +AA + +P V Y
Sbjct: 195 ETNPLGKAEWIKFFGLLLGSLPEAQQYFEEVEAAYQEARELAAKAST--RPTVLSGALYR 252
Query: 202 GVWSFT-KEAFKLKYVEDAGGENVDSSINKMTYNISNSDDLE-QLHAILCTVDVVIDGTY 259
VW E++ ++EDA E + + + S L L A+L + +D +
Sbjct: 253 DVWYLPGGESWAAAFLEDAHAEYLYA-------DTPGSGSLSLSLEAVL---EKGVDAEF 302
Query: 260 TLEPANYTQSTFLENIDAADKSCFAFLTNQSLWRFDKRNQNSLALDWFDGAVSQPQLVLA 319
+ P+ YT + + + D F + ++ + + L +F+ ++P VL
Sbjct: 303 WISPSQYTSYSEMAS-DNPHYEQFRAFRERRIFGYASNRGSGGGLLYFEIGPNRPDWVLK 361
Query: 320 DLTEALFP--TGNYTITYFRNIA 340
DL L P Y +F+ +A
Sbjct: 362 DLIHHLHPGLLHGYEPVFFKPLA 384
>gi|255037091|ref|YP_003087712.1| periplasmic binding protein [Dyadobacter fermentans DSM 18053]
gi|254949847|gb|ACT94547.1| periplasmic binding protein [Dyadobacter fermentans DSM 18053]
Length = 389
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 88/201 (43%), Gaps = 13/201 (6%)
Query: 142 EDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKP-IVAWMEFY 200
E PL RAEW+K + + E N+ + V+ Y LT +AA K KP +++ +
Sbjct: 197 EQTPLARAEWVKLMAALLDKEQLVNEKFAKVESEYQRLTALAANAAK--KPTVLSGLNTK 254
Query: 201 NGVWSFTKEAFKLKYVEDAGGENVDSSINKMTYNISNSDDLEQLHAILCTVDVVIDGTYT 260
+ + + ++ ++ DAG D S E ++ T D ++ +
Sbjct: 255 DAWFVPSGNSYMARFFADAGA---DYPWQTTQSTGSLPLHFEAVYPKALTADYWLNVGF- 310
Query: 261 LEPANYTQSTFLENIDAADKSCFAFLTNQSLWRFDKRNQNSLALDWFDGAVSQPQLVLAD 320
+PA+ +S ++ AD + F N+ ++ ++ R + D+F+ P +VLAD
Sbjct: 311 -DPADSRKSILAQDSRYADFNAF---KNRQMYSYNNRVNALGSNDFFESGSVNPHIVLAD 366
Query: 321 LTEALFP--TGNYTITYFRNI 339
L P Y + Y++ +
Sbjct: 367 LIHIFHPGLQPGYQLYYYKRL 387
>gi|319951654|ref|YP_004162921.1| periplasmic binding protein [Cellulophaga algicola DSM 14237]
gi|319420314|gb|ADV47423.1| periplasmic binding protein [Cellulophaga algicola DSM 14237]
Length = 395
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 88/203 (43%), Gaps = 23/203 (11%)
Query: 142 EDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEFYN 201
E+ PL +AEWIKF F E +A+ ++ + NYL +AA T +P V YN
Sbjct: 206 EETPLGKAEWIKFFAPFYGLEKKADSIFQDITNNYLAAKELAAKATN--RPTVISGAIYN 263
Query: 202 GVWSFT-KEAFKLKYVEDAGGENVDSSINKMTYNISNSDDLEQLHAILCTVDVVID---- 256
VW +++ K++EDA + D E+ ++ + + V++
Sbjct: 264 DVWYLPGGKSWASKFIEDANAAYM-------------FKDTEETGSLSLSWESVLEKGKK 310
Query: 257 GTYTLEPANYTQSTFLENIDAADKSCFAFLTNQSLWRFDKRNQNSLALDWFDGAVSQPQL 316
+ + P+ +T + ++ F + ++ F + L +++ A ++P L
Sbjct: 311 ANFWISPSQFTSYKDM-TANSQHYGQFDAFKKKKVYSFAGTTGETGGLLYYELAPNRPDL 369
Query: 317 VLADLTEALFP--TGNYTITYFR 337
VL DL P NY T+F+
Sbjct: 370 VLKDLIHIFHPDLLPNYIPTFFK 392
>gi|424662275|ref|ZP_18099312.1| hypothetical protein HMPREF1205_02661 [Bacteroides fragilis HMW
616]
gi|404578064|gb|EKA82800.1| hypothetical protein HMPREF1205_02661 [Bacteroides fragilis HMW
616]
Length = 380
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 93/203 (45%), Gaps = 19/203 (9%)
Query: 142 EDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEFYN 201
E L RAEWIKF+G F + EA A+ ++ + + Y + + A + + P + + Y
Sbjct: 189 EKSILGRAEWIKFVGAFFDKEALADSIFGQIAKQYNEVKKSAEKFS--YAPSILSGQDYR 246
Query: 202 GVWSFT-KEAFKLKYVEDAGGENVDSSINKMTYNISNSDDLEQLHAILCTVDVVIDGTYT 260
G WS ++ + DAG ++ + +IS+S + +H D+ +
Sbjct: 247 GTWSMPGGRSYSAQLFRDAGANYYYANDTTASGSISSSIEEALIH--FNQADIWVG---- 300
Query: 261 LEPANYTQSTFLENIDAADK--SCFAFLTNQSLWRFDKRNQNSLALDWFDGAVSQPQLVL 318
Q+ LE + D F + +++ +KR + D+++ V++P L+L
Sbjct: 301 ------VQANTLEELGRMDPKYKLFKSYKDGNVYHINKRTNATGGNDYWESGVARPDLLL 354
Query: 319 ADLTEALFPT--GNYTITYFRNI 339
+D+ + + PT +Y +TY +
Sbjct: 355 SDMIKIVHPTLLPDYELTYMDKL 377
>gi|224539663|ref|ZP_03680202.1| hypothetical protein BACCELL_04571 [Bacteroides cellulosilyticus
DSM 14838]
gi|224518754|gb|EEF87859.1| hypothetical protein BACCELL_04571 [Bacteroides cellulosilyticus
DSM 14838]
Length = 384
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 48/84 (57%), Gaps = 3/84 (3%)
Query: 140 FGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEF 199
+ E PL +AEWIKF+G+F E AN+ + A++++Y L ++AA K +P+V E
Sbjct: 195 YKEMTPLGQAEWIKFIGLFIGQEEEANEKFAAIEKHYNDLKQLAADVKK--RPVVFSGEI 252
Query: 200 YNGVW-SFTKEAFKLKYVEDAGGE 222
G W + ++F + DAG +
Sbjct: 253 RGGNWYAVGGKSFLAELFRDAGAD 276
>gi|313203547|ref|YP_004042204.1| periplasmic binding protein [Paludibacter propionicigenes WB4]
gi|312442863|gb|ADQ79219.1| periplasmic binding protein [Paludibacter propionicigenes WB4]
Length = 375
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 92/206 (44%), Gaps = 26/206 (12%)
Query: 142 EDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAG-KTKPFKPIVAWMEFY 200
E L RAEWIKF+ F N E +A+ ++ V + Y + AAG KTKP I+ F
Sbjct: 187 ETSLLARAEWIKFVAAFYNKEKQADSIFADVDKRYNDIKAKAAGVKTKP--NIMVGSNF- 243
Query: 201 NGVWSF-TKEAFKLKYVEDAGGENV---DSSINKMTYNISNSDDLEQLHAILCTVDVVID 256
G W + F K DAG D++ + N+ E + DV ++
Sbjct: 244 RGTWYMPSGRNFMGKLFADAGSRYFYANDTTAGSLPLNV------ETVLKNFSQTDVWLN 297
Query: 257 GTYTLEPANYTQSTFLENIDAADK-SCFAFLTNQSLWRFDKRNQNSLALDWFDGAVSQPQ 315
+ ++ E + A K + F + + ++ +KR S A D+++ AV++P
Sbjct: 298 CNF---------NSLDELVKADSKHALFRPVQLKQVYNINKRLLPSTANDFWESAVARPD 348
Query: 316 LVLADLTEALFP--TGNYTITYFRNI 339
L+L+D+ L P Y +TY +
Sbjct: 349 LLLSDMIAILHPEILPGYILTYVEKL 374
>gi|189466000|ref|ZP_03014785.1| hypothetical protein BACINT_02364 [Bacteroides intestinalis DSM
17393]
gi|189434264|gb|EDV03249.1| periplasmic binding protein [Bacteroides intestinalis DSM 17393]
Length = 384
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 13/89 (14%)
Query: 140 FGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEF 199
+ E PL +AEWIKF+G+F E AN+ + A++++Y L ++AA K +P+V E
Sbjct: 195 YKEMTPLGQAEWIKFIGLFIGQEKEANEKFAAIEKHYNDLKQLAADVKK--RPVVFSGEI 252
Query: 200 YNGVW------SFTKEAFKLKYVEDAGGE 222
G W SF E F+ DAG +
Sbjct: 253 RGGNWYAVGGKSFLAELFR-----DAGAD 276
>gi|383112114|ref|ZP_09932913.1| hypothetical protein BSGG_3774 [Bacteroides sp. D2]
gi|382949124|gb|EFS33074.2| hypothetical protein BSGG_3774 [Bacteroides sp. D2]
Length = 394
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 45/84 (53%), Gaps = 3/84 (3%)
Query: 140 FGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEF 199
+ E+ PL +AEWIKF+G+ E +AN +++++K Y L ++ A K KP+V E
Sbjct: 205 YKENSPLGQAEWIKFIGLLIGEEEKANAIFDSIKTEYNTLKQLTAKIEK--KPVVFSGEL 262
Query: 200 YNGVW-SFTKEAFKLKYVEDAGGE 222
G W + F + DAG +
Sbjct: 263 RGGNWYAVGGRNFLAQLFRDAGAD 286
>gi|423723420|ref|ZP_17697569.1| hypothetical protein HMPREF1078_01556 [Parabacteroides merdae
CL09T00C40]
gi|409241446|gb|EKN34215.1| hypothetical protein HMPREF1078_01556 [Parabacteroides merdae
CL09T00C40]
Length = 386
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 47/85 (55%), Gaps = 3/85 (3%)
Query: 140 FGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAA-GKTKPFKPIVAWME 198
+ E PL +AEW+KF+G+ E +AN+ ++A+ Y L + A GK K +P+V E
Sbjct: 195 YKEMTPLGQAEWVKFVGLLVGQEQKANETFDAIAARYNELKELTAEGKVKK-RPVVLSGE 253
Query: 199 FYNGVW-SFTKEAFKLKYVEDAGGE 222
G W + E+F + +DAG +
Sbjct: 254 MRGGNWYAVGGESFLAQLFKDAGAD 278
>gi|154492942|ref|ZP_02032568.1| hypothetical protein PARMER_02584 [Parabacteroides merdae ATCC
43184]
gi|154087247|gb|EDN86292.1| periplasmic binding protein [Parabacteroides merdae ATCC 43184]
Length = 375
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 47/85 (55%), Gaps = 3/85 (3%)
Query: 140 FGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAA-GKTKPFKPIVAWME 198
+ E PL +AEW+KF+G+ E +AN+ ++A+ Y L + A GK K +P+V E
Sbjct: 184 YKEMTPLGQAEWVKFVGLLVGQEQKANETFDAIAARYNELKELTAEGKVKK-RPVVLSGE 242
Query: 199 FYNGVW-SFTKEAFKLKYVEDAGGE 222
G W + E+F + +DAG +
Sbjct: 243 MRGGNWYAVGGESFLAQLFKDAGAD 267
>gi|423343912|ref|ZP_17321625.1| hypothetical protein HMPREF1077_03055 [Parabacteroides johnsonii
CL02T12C29]
gi|409213774|gb|EKN06787.1| hypothetical protein HMPREF1077_03055 [Parabacteroides johnsonii
CL02T12C29]
Length = 386
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 47/85 (55%), Gaps = 3/85 (3%)
Query: 140 FGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAA-GKTKPFKPIVAWME 198
+ E PL +AEW+KF+G+ E +AN+ ++A+ Y L + A GK K +P+V E
Sbjct: 195 YKEMTPLGQAEWVKFVGLLVGQEQKANETFDAIAARYNELKELTAEGKVKK-RPVVLSGE 253
Query: 199 FYNGVW-SFTKEAFKLKYVEDAGGE 222
G W + E+F + +DAG +
Sbjct: 254 MRGGNWYAVGGESFLAQLFKDAGAD 278
>gi|218260627|ref|ZP_03475845.1| hypothetical protein PRABACTJOHN_01509 [Parabacteroides johnsonii
DSM 18315]
gi|218224436|gb|EEC97086.1| hypothetical protein PRABACTJOHN_01509 [Parabacteroides johnsonii
DSM 18315]
Length = 386
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 47/85 (55%), Gaps = 3/85 (3%)
Query: 140 FGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAA-GKTKPFKPIVAWME 198
+ E PL +AEW+KF+G+ E +AN+ ++A+ Y L + A GK K +P+V E
Sbjct: 195 YKEMTPLGQAEWVKFVGLLVGQEQKANETFDAIAARYNELKELTAEGKVKK-RPVVLSGE 253
Query: 199 FYNGVW-SFTKEAFKLKYVEDAGGE 222
G W + E+F + +DAG +
Sbjct: 254 MRGGNWYAVGGESFLAQLFKDAGAD 278
>gi|423345651|ref|ZP_17323340.1| hypothetical protein HMPREF1060_01012 [Parabacteroides merdae
CL03T12C32]
gi|409222043|gb|EKN14990.1| hypothetical protein HMPREF1060_01012 [Parabacteroides merdae
CL03T12C32]
Length = 386
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 47/85 (55%), Gaps = 3/85 (3%)
Query: 140 FGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAA-GKTKPFKPIVAWME 198
+ E PL +AEW+KF+G+ E +AN+ ++A+ Y L + A GK K +P+V E
Sbjct: 195 YKEMTPLGQAEWVKFVGLLVGQEQKANETFDAIAARYNELKELTAEGKVKK-RPVVLSGE 253
Query: 199 FYNGVW-SFTKEAFKLKYVEDAGGE 222
G W + E+F + +DAG +
Sbjct: 254 MRGGNWYAVGGESFLAQLFKDAGAD 278
>gi|427382700|ref|ZP_18879420.1| hypothetical protein HMPREF9447_00453 [Bacteroides oleiciplenus YIT
12058]
gi|425729945|gb|EKU92796.1| hypothetical protein HMPREF9447_00453 [Bacteroides oleiciplenus YIT
12058]
Length = 384
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 48/84 (57%), Gaps = 3/84 (3%)
Query: 140 FGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEF 199
+ E PL +AEWIKF+G+F E AN+ + A++++Y L ++AA K +P+V E
Sbjct: 195 YKEMTPLGQAEWIKFVGLFIGQEKEANEKFAAIEKHYNDLKQLAADVEK--RPVVFSGEI 252
Query: 200 YNGVW-SFTKEAFKLKYVEDAGGE 222
G W + ++F + DAG +
Sbjct: 253 RGGNWYAVGGKSFLAQLFRDAGAD 276
>gi|423215394|ref|ZP_17201921.1| hypothetical protein HMPREF1074_03453 [Bacteroides xylanisolvens
CL03T12C04]
gi|392691962|gb|EIY85202.1| hypothetical protein HMPREF1074_03453 [Bacteroides xylanisolvens
CL03T12C04]
Length = 394
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 45/84 (53%), Gaps = 3/84 (3%)
Query: 140 FGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEF 199
+ E+ PL +AEWIKF+G+ E +AN +++++K Y L ++ A K KP+V E
Sbjct: 205 YKENSPLGQAEWIKFIGLLIGEEEKANVIFDSIKAEYNTLKQLTAKIEK--KPVVFSGEL 262
Query: 200 YNGVW-SFTKEAFKLKYVEDAGGE 222
G W + F + DAG +
Sbjct: 263 RGGNWYAVGGRNFLAQLFRDAGAD 286
>gi|383450224|ref|YP_005356945.1| ABC-type iron(III)-transport system, binding protein precursor
component [Flavobacterium indicum GPTSA100-9]
gi|380501846|emb|CCG52888.1| Probable ABC-type iron(III)-transport system, binding protein
precursor component [Flavobacterium indicum GPTSA100-9]
Length = 376
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 74/345 (21%), Positives = 141/345 (40%), Gaps = 43/345 (12%)
Query: 8 VEDAQNFHIYYGQTFKVIK------NAIDGRSYLLIQNNSRMAARTKYCTARIKSFVIPM 61
+ A++ I G+ F V+K NA + +Y+L +N S++ + ++ +P+
Sbjct: 35 ITHAKSLSIEEGEDFTVVKVTNPWPNAKETFTYVLRKNKSKIPSNL----SQFPVIDVPL 90
Query: 62 -SNYSVDTDFFP-GKLLGLLSSMKGMT-SESVASGCVLKLYQGGEIGLVNKSEPLQFSQY 118
S+ T P + LG+ + G ++ ++S L + G+I V ++E L +
Sbjct: 91 KSSIVTSTTIIPFLEQLGVEEKLIGFPHTDYISSEKTRTLIEKGKIANVGQNENLNIEKI 150
Query: 119 A-------AHFTTDSDQPQACNFAN-------FAPFGEDGPLRRAEWIKFLGIFANAEAR 164
F D+ P N A + E PL +AEWIK G + E
Sbjct: 151 IELNPDVLVSFCVDNVNPTLKNLEKNGIKIIIQADWMEQTPLGKAEWIKLYGALFSKEKE 210
Query: 165 ANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEFYNGVWSFTK-EAFKLKYVEDAGGEN 223
AN ++N++++NY + + K KP + Y W +++ Y++DA
Sbjct: 211 ANDIFNSIEKNYKKALSIIKNEKK--KPSILLGSLYQDQWFVPNGKSWLAYYMKDAKSNY 268
Query: 224 V-DSSINKMTYNISNSDDLEQLHAILCTVDVVIDGTYTLEPANYTQSTFLENIDAADKSC 282
+ + + +S LE HA + ++ AN + F DA K
Sbjct: 269 LWQHTEGTGSTPLSFEKVLEVAHAADKWITSGFSSLNEMKNANPNYAAF----DAFKKG- 323
Query: 283 FAFLTNQSLWRFDKRNQNSLALDWFDGAVSQPQLVLADLTEALFP 327
++ F+ + + + +++ + S+P LVL D + L P
Sbjct: 324 -------EVYSFEVKKGKTGGVIYYEQSPSRPDLVLQDFIKILHP 361
>gi|427719383|ref|YP_007067377.1| ABC transporter substrate-binding protein [Calothrix sp. PCC 7507]
gi|427351819|gb|AFY34543.1| ABC-type transporter, periplasmic subunit [Calothrix sp. PCC 7507]
Length = 405
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 77/360 (21%), Positives = 158/360 (43%), Gaps = 59/360 (16%)
Query: 2 PSDISKVEDAQNFHIYYGQTFKVI------KNAIDGRSYLLIQNNSRMA---ARTKYCTA 52
P+ I+ + A + Y + +K++ +NA G Y+L+Q + + ++ + T
Sbjct: 56 PNKIN-ITHAIGLAVEYHKHYKIVTVKNPWQNAKKGFRYILVQCGTPIPKGFSQAQVITV 114
Query: 53 RIKSFVIPMSNYSVDTDFFPG-KLLGLLSSMKGMT-SESVASGCVLKLYQGGEIGLVNKS 110
I S V S+ T P LG++ + G++ S+ V + V++ + G+I + +
Sbjct: 115 PINSVV------SLSTTHLPHLAKLGVVDKLIGISDSKQVNTPDVVERVKAGKISQIGNN 168
Query: 111 EPLQFSQ-------YAAHFTTDSDQPQA--------CNFANFAPFGEDGPLRRAEWIKFL 155
+ + + T + Q + A A + E PL ++EW+KF
Sbjct: 169 ANVDIEKILELNPDLVTTYGTGNSQTDSYAKLTEAGLKVAMNAEYMEATPLGQSEWLKFT 228
Query: 156 GIFANAEARANQVYNAVKENYLCLTRVAAG-KTKPFKPIVAWMEFYNGVWSFTKEAFKLK 214
+F N E A ++++ + + Y + + A K++P I +F + + ++ K
Sbjct: 229 ALFFNKEEEAEKIFSKIADKYEQIAQKAKSVKSRP--TIFVGFKFKDTWYMPGGNSYVAK 286
Query: 215 YVEDAGGENVDSSINKMTYNISNSDDLEQLHAILCTVDVV----IDGTYTLEPANYTQS- 269
Y+ DAG N SDD + ++ + +VV ++ Y L N+ QS
Sbjct: 287 YLADAGA------------NYLWSDD-KSSGSLPLSFEVVFERAVNADYWL---NFRQSW 330
Query: 270 TFLENIDAADK--SCFAFLTNQSLWRFDKRNQNSLALDWFDGAVSQPQLVLADLTEALFP 327
++++ D + F + +L+ + R + D+++G +S P +VL+DL + L P
Sbjct: 331 KSVKDLVTEDNRYADFKAVKQSNLYNNNARVNANGGNDYWEGGISNPDIVLSDLIKILHP 390
>gi|423225482|ref|ZP_17211949.1| hypothetical protein HMPREF1062_04135 [Bacteroides cellulosilyticus
CL02T12C19]
gi|392632410|gb|EIY26370.1| hypothetical protein HMPREF1062_04135 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 368
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 89/194 (45%), Gaps = 25/194 (12%)
Query: 140 FGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEF 199
+ E PL +AEWIKF+G+F E AN + A++++Y L ++AA K +P+V E
Sbjct: 179 YKEMTPLGQAEWIKFIGLFIGQEEEANAKFAAIEKHYNDLKQLAANVKK--RPVVFSGEI 236
Query: 200 YNGVW-SFTKEAFKLKYVEDAGGENVDSSINKMTYNISNSDDLEQLHAILCTVDV----- 253
G W + ++F + DAG D + + + D E +++ + D
Sbjct: 237 RGGNWYAVGGKSFLAELFRDAGA---DYFLKDDPRSGGVTLDFETVYSQAESADYWRIVN 293
Query: 254 VIDGTYTLEPANYTQSTFLENIDAADKSCFAFLTNQSLWRFDKRNQNSLALDWFDGAVSQ 313
DGT++ + L+++D AF ++ + + R Q +++ +
Sbjct: 294 SYDGTFSYDA--------LKSLDPRYADFRAF-RDKGVIYCNMREQ-----PFYESMPME 339
Query: 314 PQLVLADLTEALFP 327
P++VL DL A P
Sbjct: 340 PEIVLEDLIHAFHP 353
>gi|313205888|ref|YP_004045065.1| periplasmic binding protein [Riemerella anatipestifer ATCC 11845 =
DSM 15868]
gi|312445204|gb|ADQ81559.1| periplasmic binding protein [Riemerella anatipestifer ATCC 11845 =
DSM 15868]
Length = 348
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 73/314 (23%), Positives = 126/314 (40%), Gaps = 43/314 (13%)
Query: 38 QNNSRMAARTKYCTARIKSFVIPMSNYSVDTDFFPGKLL--GLLSSMKGMTSES-VASGC 94
++N+++ TK ++ I + +P+ + + G +L GL S + G++SE + S
Sbjct: 39 EDNNKVIINTKNFSSEISAAKLPLKKVVLLSSSMLGYMLELGLESHIIGISSEEYIYSEK 98
Query: 95 VLKLYQGGEIGLVNKSEPLQFSQ------------YAAHFTTDSDQPQACN----FANFA 138
V L Q +I V + + + +F D + N F N
Sbjct: 99 VKALIQSKKIHTVGNEQKYDLEKIISLKPDAVITNHIPNFENTYDLLRKNNIEVIFLN-- 156
Query: 139 PFGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWME 198
+ E+ PL + ++K G E +A++ Y +K+NY L ++ A K KP V E
Sbjct: 157 EYLENEPLEKTAYLKIFGKLFGIEKQASERYLNIKQNYDNL-KLQAQKI-SHKPQVLCNE 214
Query: 199 FYNGVWSFT-KEAFKLKYVEDAGGENVDSSINKMTYNISNSDDLEQLHAILCTVDVVI-- 255
Y W + F KY DAGG + +DL++ ++ + + V
Sbjct: 215 IYGNQWFLPGNKTFAAKYFNDAGGNYI-------------FNDLDKDQSVPLSFEEVYAK 261
Query: 256 --DGTYTLEPANYTQSTFLENIDAADKSCFAFLTNQSLWRFDKRNQNSLALDWFDGAVSQ 313
Y + +NY L I+ + S L+ KR Q A D+F+ V +
Sbjct: 262 SKQAEYWVNLSNYQYKKELLAINPS-YSKMDIFKKGKLYNIAKR-QKGKANDYFESGVVR 319
Query: 314 PQLVLADLTEALFP 327
LVL D + P
Sbjct: 320 ADLVLKDYIKIFHP 333
>gi|326383168|ref|ZP_08204857.1| ABC-type Fe3+-hydroxamate transport system periplasmic
component-like protein [Gordonia neofelifaecis NRRL
B-59395]
gi|326198304|gb|EGD55489.1| ABC-type Fe3+-hydroxamate transport system periplasmic
component-like protein [Gordonia neofelifaecis NRRL
B-59395]
Length = 398
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 87/353 (24%), Positives = 138/353 (39%), Gaps = 51/353 (14%)
Query: 4 DISKVEDAQNFHIYYGQTFKVI-----KNAIDGRSYLLIQNNSRMAARTKYCTARIKSFV 58
D S +EDA I Y +++V+ SY+L++ + T + + V
Sbjct: 51 DKSTIEDATGLRIEYHNSYQVVTVEHPAQGAPPASYVLVRCGAPAPKLTGDLASAPQVQV 110
Query: 59 IPMSNYSVDTDFFPG-KLLGLLSSMKGM-TSESVASGCVLKLYQGGEI------GLVNKS 110
S Y+ T P LG ++ G+ T+ V++ ++K G++ G VN +
Sbjct: 111 PVRSIYAGSTTHLPALAALGESDAVTGVATAGFVSTPEIVKRIDEGKVREFTDAGEVN-A 169
Query: 111 EPLQFSQYAAHFTTDSDQPQACNFANFAPFG----------EDGPLRRAEWIKFLGIFAN 160
E + T +D P F G E+ PL RAEWIKF
Sbjct: 170 EKVIAGHPDVLVTDGNDSPA---FGKITAAGVPVIANADWLEENPLGRAEWIKFFAALTG 226
Query: 161 AEARANQVYNAVKENYLCLTRVAAGKTKPF-KPIVAWMEFYNGVWSF-TKEAFKLKYVED 218
E +A V+ V++ Y R A K K V E NG W+ + ++ + V D
Sbjct: 227 TEKKAATVFGQVQKQY----RAVADKLVDVPKTDVLLGEISNGSWTMASGGSYFGRLVAD 282
Query: 219 AGGENVDSSINKMTYNISNSDDLEQLHAILCTVDVVIDGTYTLEP---ANYTQSTFLENI 275
AGG TY + L +++ VI + ++ T ST + ++
Sbjct: 283 AGG----------TYPWIDDPAAGSLQ---LSIEAVIARSRNASAWLLSDPTVST-VADL 328
Query: 276 DAADKSCFAFLT-NQSLWRFDKRNQNSLALDWFDGAVSQPQLVLADLTEALFP 327
D AF T Q W K + D+++ V +P LVL+DL L P
Sbjct: 329 YKQDPRYRAFTTPAQQAWNSTKAVNAAGGNDYWEKGVLRPDLVLSDLAAILHP 381
>gi|406662186|ref|ZP_11070289.1| ABC-type Fe3+-citrate transport system, periplasmic component
[Cecembia lonarensis LW9]
gi|405553869|gb|EKB49042.1| ABC-type Fe3+-citrate transport system, periplasmic component
[Cecembia lonarensis LW9]
Length = 384
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 90/204 (44%), Gaps = 20/204 (9%)
Query: 142 EDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEFYN 201
E PL RAEW+KF G +AN ++ A+K YL + + + KP V YN
Sbjct: 192 EQHPLGRAEWVKFTGTLLGKWEKANSIFEAIKMAYLNASELIQ-DGENIKPTVISGIMYN 250
Query: 202 GVW-SFTKEAFKLKYVEDAGGENV-DSSINKMTYNISNSDDLEQLHAILCTVDVVIDGTY 259
+W + E++ + +E AGG+ + + + +S LE+ D +
Sbjct: 251 DIWYAPGAESWGAQLLEAAGGDYIFKTQPGTGSLQLSYEYVLEKAQ----------DASI 300
Query: 260 TLEPANYTQSTFLENIDAADK--SCFAFLTNQSLWRFDKRNQNSLALDWFDGAVSQPQLV 317
+ A++ L ++ AD F ++ + + + +++F+ +P L+
Sbjct: 301 WIGAADHKT---LFDMGQADPRYQYFKAFQEGKVYTYTLKKGATGGIEYFELGYLRPDLI 357
Query: 318 LADLTEALFPTG--NYTITYFRNI 339
L DL + L+P NY++ ++ +
Sbjct: 358 LQDLIKILYPEQLPNYSLYFYTRL 381
>gi|60681725|ref|YP_211869.1| hypothetical protein BF2246 [Bacteroides fragilis NCTC 9343]
gi|60493159|emb|CAH07940.1| putative exported periplasmic protein [Bacteroides fragilis NCTC
9343]
Length = 382
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 91/208 (43%), Gaps = 27/208 (12%)
Query: 140 FGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEF 199
+ E PL +AEWIKF+G+F E AN+ + A++++Y L A K +P+V E
Sbjct: 193 YKEMTPLGQAEWIKFIGLFIGEEETANRKFAAIEKHYNELKERVAHVKK--RPVVFSGEI 250
Query: 200 YNGVW-SFTKEAFKLKYVEDAGGENVDSSINKMTYNISNSDDLEQLHAILCTVDV----- 253
G W + ++F + DAG D + + + D E +++ + D
Sbjct: 251 RGGNWYAVGGKSFLAQLFRDAGA---DYFLKDDPRSGGVTLDFETVYSQAESADYWRIVN 307
Query: 254 VIDGTYTLEPANYTQSTFLENIDAADKSCFAFLTNQSLWRFDKRNQNSLALDWFDGAVSQ 313
DGT++ + L++ D AF ++ N +++ +Q
Sbjct: 308 SFDGTFSYD--------VLKSEDPRYADFRAFREKGVIY------CNMREKPFYESMPTQ 353
Query: 314 PQLVLADLTEALFP--TGNYTITYFRNI 339
P++VL DL +A P +YT Y+ +
Sbjct: 354 PEVVLEDLIKAFHPDLLPDYTPVYYERL 381
>gi|265763749|ref|ZP_06092317.1| iron(III) ABC transporter periplasmic iron-binding protein
[Bacteroides sp. 2_1_16]
gi|263256357|gb|EEZ27703.1| iron(III) ABC transporter periplasmic iron-binding protein
[Bacteroides sp. 2_1_16]
Length = 382
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 91/208 (43%), Gaps = 27/208 (12%)
Query: 140 FGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEF 199
+ E PL +AEWIKF+G+F E AN+ + A++++Y L A K +P+V E
Sbjct: 193 YKEMTPLGQAEWIKFIGLFIGEEETANRKFAAIEKHYNELKERVAHVKK--RPVVFSGEI 250
Query: 200 YNGVW-SFTKEAFKLKYVEDAGGENVDSSINKMTYNISNSDDLEQLHAILCTVDV----- 253
G W + ++F + DAG D + + + D E +++ + D
Sbjct: 251 RGGNWYAVGGKSFLAQLFRDAGA---DYFLKDDPRSGGVTLDFETVYSQAESADFWRIVN 307
Query: 254 VIDGTYTLEPANYTQSTFLENIDAADKSCFAFLTNQSLWRFDKRNQNSLALDWFDGAVSQ 313
DGT++ + L++ D AF ++ N +++ +Q
Sbjct: 308 SFDGTFSYD--------VLKSEDPRYADFRAFREKGVIY------CNMREKPFYESMPTQ 353
Query: 314 PQLVLADLTEALFP--TGNYTITYFRNI 339
P++VL DL +A P +YT Y+ +
Sbjct: 354 PEVVLEDLIKAFHPDLLPDYTPVYYERL 381
>gi|336409843|ref|ZP_08590325.1| hypothetical protein HMPREF1018_02341 [Bacteroides sp. 2_1_56FAA]
gi|335946224|gb|EGN08030.1| hypothetical protein HMPREF1018_02341 [Bacteroides sp. 2_1_56FAA]
Length = 382
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 91/208 (43%), Gaps = 27/208 (12%)
Query: 140 FGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEF 199
+ E PL +AEWIKF+G+F E AN+ + A++++Y L A K +P+V E
Sbjct: 193 YKEMTPLGQAEWIKFIGLFIGEEETANRKFAAIEKHYNELKERVAHVKK--RPVVFSGEI 250
Query: 200 YNGVW-SFTKEAFKLKYVEDAGGENVDSSINKMTYNISNSDDLEQLHAILCTVDV----- 253
G W + ++F + DAG D + + + D E +++ + D
Sbjct: 251 RGGNWYAVGGKSFLAQLFRDAGA---DYFLKDDPRSGGVTLDFETVYSQAESADYWRIVN 307
Query: 254 VIDGTYTLEPANYTQSTFLENIDAADKSCFAFLTNQSLWRFDKRNQNSLALDWFDGAVSQ 313
DGT++ + L++ D AF ++ N +++ +Q
Sbjct: 308 SFDGTFSYD--------VLKSEDPRYADFRAFREKGVIY------CNMREKPFYESMPTQ 353
Query: 314 PQLVLADLTEALFP--TGNYTITYFRNI 339
P++VL DL +A P +YT Y+ +
Sbjct: 354 PEVVLEDLIKAFHPDLLPDYTPVYYERL 381
>gi|53713481|ref|YP_099473.1| iron(III) ABC transporter periplasmic iron-binding protein
[Bacteroides fragilis YCH46]
gi|52216346|dbj|BAD48939.1| iron(III) ABC transporter periplasmic iron-binding protein
[Bacteroides fragilis YCH46]
Length = 382
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 91/208 (43%), Gaps = 27/208 (12%)
Query: 140 FGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEF 199
+ E PL +AEWIKF+G+F E AN+ + A++++Y L A K +P+V E
Sbjct: 193 YKEMTPLGQAEWIKFIGLFIGEEETANRKFAAIEKHYNELKERVAHVKK--RPVVFSGEI 250
Query: 200 YNGVW-SFTKEAFKLKYVEDAGGENVDSSINKMTYNISNSDDLEQLHAILCTVDV----- 253
G W + ++F + DAG D + + + D E +++ + D
Sbjct: 251 RGGNWYAVGGKSFLAQLFRDAGA---DYFLKDDPRSGGVTLDFETVYSQAESADYWRIVN 307
Query: 254 VIDGTYTLEPANYTQSTFLENIDAADKSCFAFLTNQSLWRFDKRNQNSLALDWFDGAVSQ 313
DGT++ + L++ D AF ++ N +++ +Q
Sbjct: 308 SFDGTFSYD--------VLKSEDTRYADFRAFREKGVIY------CNMREKPFYESMPTQ 353
Query: 314 PQLVLADLTEALFP--TGNYTITYFRNI 339
P++VL DL +A P +YT Y+ +
Sbjct: 354 PEVVLEDLIKAFHPDLLPDYTPVYYERL 381
>gi|383118453|ref|ZP_09939195.1| hypothetical protein BSHG_2445 [Bacteroides sp. 3_2_5]
gi|251945749|gb|EES86156.1| hypothetical protein BSHG_2445 [Bacteroides sp. 3_2_5]
Length = 382
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 91/208 (43%), Gaps = 27/208 (12%)
Query: 140 FGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEF 199
+ E PL +AEWIKF+G+F E AN+ + A++++Y L A K +P+V E
Sbjct: 193 YKEMTPLGQAEWIKFIGLFIGEEETANRKFAAIEKHYNELKERVAHVKK--RPVVFSGEI 250
Query: 200 YNGVW-SFTKEAFKLKYVEDAGGENVDSSINKMTYNISNSDDLEQLHAILCTVDV----- 253
G W + ++F + DAG D + + + D E +++ + D
Sbjct: 251 RGGNWYAVGGKSFLAQLFRDAGA---DYFLKDDPRSGGVTLDFETVYSQAESADYWRIVN 307
Query: 254 VIDGTYTLEPANYTQSTFLENIDAADKSCFAFLTNQSLWRFDKRNQNSLALDWFDGAVSQ 313
DGT++ + L++ D AF ++ N +++ +Q
Sbjct: 308 SFDGTFSYD--------VLKSEDPRYADFRAFREKGVIY------CNMREKPFYESMPTQ 353
Query: 314 PQLVLADLTEALFP--TGNYTITYFRNI 339
P++VL DL +A P +YT Y+ +
Sbjct: 354 PEVVLEDLIKAFHPDLLPDYTPVYYERL 381
>gi|375358587|ref|YP_005111359.1| putative exported periplasmic protein [Bacteroides fragilis 638R]
gi|423271448|ref|ZP_17250418.1| hypothetical protein HMPREF1079_03500 [Bacteroides fragilis
CL05T00C42]
gi|423275647|ref|ZP_17254591.1| hypothetical protein HMPREF1080_03244 [Bacteroides fragilis
CL05T12C13]
gi|423285709|ref|ZP_17264590.1| hypothetical protein HMPREF1204_04128 [Bacteroides fragilis HMW
615]
gi|301163268|emb|CBW22818.1| putative exported periplasmic protein [Bacteroides fragilis 638R]
gi|392697144|gb|EIY90330.1| hypothetical protein HMPREF1079_03500 [Bacteroides fragilis
CL05T00C42]
gi|392701314|gb|EIY94473.1| hypothetical protein HMPREF1080_03244 [Bacteroides fragilis
CL05T12C13]
gi|404578760|gb|EKA83479.1| hypothetical protein HMPREF1204_04128 [Bacteroides fragilis HMW
615]
Length = 382
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 91/208 (43%), Gaps = 27/208 (12%)
Query: 140 FGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEF 199
+ E PL +AEWIKF+G+F E AN+ + A++++Y L A K +P+V E
Sbjct: 193 YKEMTPLGQAEWIKFIGLFIGEEETANRKFAAIEKHYNELKERVAHVKK--RPVVFSGEI 250
Query: 200 YNGVW-SFTKEAFKLKYVEDAGGENVDSSINKMTYNISNSDDLEQLHAILCTVDV----- 253
G W + ++F + DAG D + + + D E +++ + D
Sbjct: 251 RGGNWYAVGGKSFLAQLFRDAGA---DYFLKDDPRSGGVTLDFETVYSQAESADYWRIVN 307
Query: 254 VIDGTYTLEPANYTQSTFLENIDAADKSCFAFLTNQSLWRFDKRNQNSLALDWFDGAVSQ 313
DGT++ + L++ D AF ++ N +++ +Q
Sbjct: 308 SFDGTFSYD--------VLKSEDPRYADFRAFREKGVIY------CNMREKPFYESMPTQ 353
Query: 314 PQLVLADLTEALFP--TGNYTITYFRNI 339
P++VL DL +A P +YT Y+ +
Sbjct: 354 PEVVLEDLIKAFHPDLLPDYTPVYYERL 381
>gi|319640813|ref|ZP_07995526.1| exported periplasmic protein [Bacteroides sp. 3_1_40A]
gi|345519124|ref|ZP_08798555.1| iron(III) ABC transporter periplasmic iron-binding protein
[Bacteroides sp. 4_3_47FAA]
gi|423315177|ref|ZP_17293108.1| hypothetical protein HMPREF1058_03720 [Bacteroides vulgatus
CL09T03C04]
gi|254837288|gb|EET17597.1| iron(III) ABC transporter periplasmic iron-binding protein
[Bacteroides sp. 4_3_47FAA]
gi|317387625|gb|EFV68491.1| exported periplasmic protein [Bacteroides sp. 3_1_40A]
gi|392680194|gb|EIY73567.1| hypothetical protein HMPREF1058_03720 [Bacteroides vulgatus
CL09T03C04]
Length = 383
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 49/99 (49%), Gaps = 15/99 (15%)
Query: 140 FGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEF 199
+ E PL +AEWIKF+G+ E +AN+ + A+K+ Y L + TK +P+V E
Sbjct: 194 YKEMTPLGQAEWIKFVGLLLGREDKANEQFAAIKKRYNELKELTGRVTK--RPVVFSGEL 251
Query: 200 YNGVW------SFTKEAFK-------LKYVEDAGGENVD 225
G W SF + FK LK E +GG +D
Sbjct: 252 RGGNWYAVGGRSFLAQLFKDAGADYFLKDDEQSGGVTLD 290
>gi|404449051|ref|ZP_11014043.1| Fe3+-hydroxamate ABC transporter periplasmic protein [Indibacter
alkaliphilus LW1]
gi|403765775|gb|EJZ26653.1| Fe3+-hydroxamate ABC transporter periplasmic protein [Indibacter
alkaliphilus LW1]
Length = 382
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 78/187 (41%), Gaps = 13/187 (6%)
Query: 142 EDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEFYN 201
E PL RAEWIKF G A + ++ +YL + A + KP V Y
Sbjct: 191 EQHPLGRAEWIKFTGALTGKFQEALDAFEEIEADYLEAISLTANIHE--KPTVMSGVMYK 248
Query: 202 GVWSFT-KEAFKLKYVEDAGGENVDSSINKMTYNISNSDDLEQLHAILCTVDVVIDGTYT 260
+W +++ K +E AGG + + QL+ +D D +
Sbjct: 249 DIWYVPGADSWGAKLLEAAGGTYI--------FEDQKGSGSTQLN-FEYVLDRAQDADFW 299
Query: 261 LEPANYTQSTFLENIDAADKSCFAFLTNQSLWRFDKRNQNSLALDWFDGAVSQPQLVLAD 320
+ A+Y ++N D AF N +++ + ++ + L++F+ +P L+L D
Sbjct: 300 IGAADYPNLREMKNADPRYAHFTAF-KNGNIYTYSQKKGATGGLEYFELGYLRPDLILKD 358
Query: 321 LTEALFP 327
L + L P
Sbjct: 359 LIKILHP 365
>gi|383485210|ref|YP_005394122.1| periplasmic binding protein [Riemerella anatipestifer ATCC 11845 =
DSM 15868]
gi|380459895|gb|AFD55579.1| periplasmic binding protein [Riemerella anatipestifer ATCC 11845 =
DSM 15868]
Length = 372
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 73/314 (23%), Positives = 126/314 (40%), Gaps = 43/314 (13%)
Query: 38 QNNSRMAARTKYCTARIKSFVIPMSNYSVDTDFFPGKLL--GLLSSMKGMTSES-VASGC 94
++N+++ TK ++ I + +P+ + + G +L GL S + G++SE + S
Sbjct: 63 EDNNKVIINTKNFSSEISAAKLPLKKVVLLSSSMLGYMLELGLESHIIGISSEEYIYSEK 122
Query: 95 VLKLYQGGEIGLVNKSEPLQFSQ------------YAAHFTTDSDQPQACN----FANFA 138
V L Q +I V + + + +F D + N F N
Sbjct: 123 VKALIQSKKIHTVGNEQKYDLEKIISLKPDAVITNHIPNFENTYDLLRKNNIEVIFLN-- 180
Query: 139 PFGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWME 198
+ E+ PL + ++K G E +A++ Y +K+NY L ++ A K KP V E
Sbjct: 181 EYLENEPLEKTAYLKIFGKLFGIEKQASERYLNIKQNYDNL-KLQAQKI-SHKPQVLCNE 238
Query: 199 FYNGVWSFT-KEAFKLKYVEDAGGENVDSSINKMTYNISNSDDLEQLHAILCTVDVVI-- 255
Y W + F KY DAGG + +DL++ ++ + + V
Sbjct: 239 IYGNQWFLPGNKTFAAKYFNDAGGNYI-------------FNDLDKDQSVPLSFEEVYAK 285
Query: 256 --DGTYTLEPANYTQSTFLENIDAADKSCFAFLTNQSLWRFDKRNQNSLALDWFDGAVSQ 313
Y + +NY L I+ + S L+ KR Q A D+F+ V +
Sbjct: 286 SKQAEYWVNLSNYQYKKELLAINPS-YSKMDIFKKGKLYNIAKR-QKGKANDYFESGVVR 343
Query: 314 PQLVLADLTEALFP 327
LVL D + P
Sbjct: 344 ADLVLKDYIKIFHP 357
>gi|193216144|ref|YP_001997343.1| periplasmic binding protein [Chloroherpeton thalassium ATCC 35110]
gi|193089621|gb|ACF14896.1| periplasmic binding protein [Chloroherpeton thalassium ATCC 35110]
Length = 396
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 88/206 (42%), Gaps = 24/206 (11%)
Query: 142 EDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEFYN 201
E PL EWIKF+G F EA A +++VK YL RVA + KP V
Sbjct: 206 EAQPLGVLEWIKFIGAFFQKEAIAQAYFDSVKTQYLNYQRVADAVAQ--KPGVIVGHNRK 263
Query: 202 GVW-SFTKEAFKLKYVEDAGGENVDSSINKMTYNISNSDDLEQLHAILCTVDVVIDGTYT 260
G W + A+ ++++ DAG + N+ N+ + + + I Y
Sbjct: 264 GAWTTHGSSAWFVQFLLDAGANYILEPKNEYEENVVSLE---------VAIQKGIKADYW 314
Query: 261 LEPANYTQSTFLENIDAADKSCFAFLTNQSLWRFDKRNQNSLALD-----WFDGAVSQPQ 315
+ P + + + DK F + Q+ + N N+ A + +++ + +PQ
Sbjct: 315 VNPQWDVRK--ISELLGQDKRYGIFKSVQTGQVY---NNNASAFNNGRNRFWETGMMEPQ 369
Query: 316 LVLADLTEALFP--TGNYTITYFRNI 339
+VLADL + P + + Y+R +
Sbjct: 370 VVLADLIKIFHPELLPEHKLVYYRKL 395
>gi|229496711|ref|ZP_04390423.1| Periplasmic binding protein [Porphyromonas endodontalis ATCC 35406]
gi|229316359|gb|EEN82280.1| Periplasmic binding protein [Porphyromonas endodontalis ATCC 35406]
Length = 389
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 87/211 (41%), Gaps = 33/211 (15%)
Query: 140 FGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEF 199
+ E+ PL +AEWIKF+G+ E AN+V+ +++ Y +A T +P V +
Sbjct: 199 YKENSPLGQAEWIKFIGLLLGKEGEANKVFAELRDEYNKWKEIAEKATP--RPTVFSGDL 256
Query: 200 YNGVW-SFTKEAFKLKYVEDAGGENV---DSSINKMTYNISNSDDLEQLHAILCTVDV-- 253
+G W + ++F + DAG + D + +T D E +++ VD
Sbjct: 257 KSGTWYAVGGKSFLAQLFRDAGADYFLKDDPNTGGVTL------DFETIYSKAAEVDYWR 310
Query: 254 ---VIDGTYTLEPANYTQSTFLENIDAADKSCFAFLTNQSLWRFDKRNQNSLALDWFDGA 310
DG +T + L+ D K AF + + N +++ A
Sbjct: 311 ILSSFDGEFTYKA--------LQAQDERYKDFKAFKEKGVI------HCNLSTTPYYESA 356
Query: 311 VSQPQLVLADLTEALFPT--GNYTITYFRNI 339
+ P L+L D + P YT TY+ +
Sbjct: 357 IIHPDLLLKDFIKVFHPELLPEYTPTYYHRL 387
>gi|325282217|ref|YP_004254759.1| periplasmic binding protein [Odoribacter splanchnicus DSM 20712]
gi|324314026|gb|ADY34579.1| periplasmic binding protein [Odoribacter splanchnicus DSM 20712]
Length = 379
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/199 (21%), Positives = 83/199 (41%), Gaps = 20/199 (10%)
Query: 134 FANFAPFGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPI 193
F + E+ PL +AEW+ L + + + A+ Y L + A T +
Sbjct: 182 FMYVGDYLEESPLGKAEWMVVLSEVTGKREKGEKAFAAIPVRYNALKKKVADSTLGTPSV 241
Query: 194 VAWMEFYNGVWSFTKEAFKLKYVEDAGGENVDSSINKMTYNISNSDDLEQLHAILCTVDV 253
+ + + + + + +++ + + DAGG + K T N S DLE+ + + D+
Sbjct: 242 MLNVPYGDSWFMPSTQSYAARLITDAGGRYI---YQKNTGNASIPIDLEEAYLLASDADM 298
Query: 254 VIDGTYTLEPANYTQSTFLENIDAA-----DKSCFAFLTNQSLWRFDKRNQNSLALDWFD 308
+ N + L+++ A+ D CF N ++ + R + D+++
Sbjct: 299 WL---------NVGMANSLDDLKASCPKFTDTRCF---KNGEVYNNNARTNTAGGNDYYE 346
Query: 309 GAVSQPQLVLADLTEALFP 327
AV P +VL DL + P
Sbjct: 347 SAVVNPDIVLRDLVKIFHP 365
>gi|212693386|ref|ZP_03301514.1| hypothetical protein BACDOR_02899 [Bacteroides dorei DSM 17855]
gi|265756546|ref|ZP_06090752.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
gi|423238738|ref|ZP_17219854.1| hypothetical protein HMPREF1065_00477 [Bacteroides dorei
CL03T12C01]
gi|212664030|gb|EEB24604.1| periplasmic binding protein [Bacteroides dorei DSM 17855]
gi|263233734|gb|EEZ19349.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
gi|392647616|gb|EIY41314.1| hypothetical protein HMPREF1065_00477 [Bacteroides dorei
CL03T12C01]
Length = 383
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 49/99 (49%), Gaps = 15/99 (15%)
Query: 140 FGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEF 199
+ E PL +AEWIKF+G+ E +AN+ + A+K+ Y L + TK +P+V E
Sbjct: 194 YKEMTPLGQAEWIKFVGLLLGKEDKANEQFAAIKKRYNELKELTGRVTK--RPVVFSGEL 251
Query: 200 YNGVW------SFTKEAFK-------LKYVEDAGGENVD 225
G W SF + FK LK E +GG +D
Sbjct: 252 RGGNWYAVGGRSFLAQLFKDAGADYFLKDDERSGGVTLD 290
>gi|423231869|ref|ZP_17218271.1| hypothetical protein HMPREF1063_04091 [Bacteroides dorei
CL02T00C15]
gi|423246419|ref|ZP_17227472.1| hypothetical protein HMPREF1064_03678 [Bacteroides dorei
CL02T12C06]
gi|392626175|gb|EIY20225.1| hypothetical protein HMPREF1063_04091 [Bacteroides dorei
CL02T00C15]
gi|392636009|gb|EIY29895.1| hypothetical protein HMPREF1064_03678 [Bacteroides dorei
CL02T12C06]
Length = 383
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 49/99 (49%), Gaps = 15/99 (15%)
Query: 140 FGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEF 199
+ E PL +AEWIKF+G+ E +AN+ + A+K+ Y L + TK +P+V E
Sbjct: 194 YKEMTPLGQAEWIKFVGLLLGKEDKANEQFAAIKKRYNELKELTGRVTK--RPVVFSGEL 251
Query: 200 YNGVW------SFTKEAFK-------LKYVEDAGGENVD 225
G W SF + FK LK E +GG +D
Sbjct: 252 RGGNWYAVGGRSFLAQLFKDAGADYFLKDDERSGGVTLD 290
>gi|237710442|ref|ZP_04540923.1| iron(III) ABC transporter periplasmic iron-binding protein
[Bacteroides sp. 9_1_42FAA]
gi|229455164|gb|EEO60885.1| iron(III) ABC transporter periplasmic iron-binding protein
[Bacteroides sp. 9_1_42FAA]
Length = 383
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 49/99 (49%), Gaps = 15/99 (15%)
Query: 140 FGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEF 199
+ E PL +AEWIKF+G+ E +AN+ + A+K+ Y L + TK +P+V E
Sbjct: 194 YKEMTPLGQAEWIKFVGLLLGKEDKANEQFAAIKKRYNELKELTGRVTK--RPVVFSGEL 251
Query: 200 YNGVW------SFTKEAFK-------LKYVEDAGGENVD 225
G W SF + FK LK E +GG +D
Sbjct: 252 RGGNWYAVGGRSFLAQLFKDAGADYFLKDDERSGGVTLD 290
>gi|150005589|ref|YP_001300333.1| exported periplasmic protein [Bacteroides vulgatus ATCC 8482]
gi|149934013|gb|ABR40711.1| putative exported periplasmic protein [Bacteroides vulgatus ATCC
8482]
Length = 383
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 49/99 (49%), Gaps = 15/99 (15%)
Query: 140 FGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEF 199
+ E PL +AEWIKF+G+ E +AN+ + A+K+ Y L + TK +P+V E
Sbjct: 194 YKEMTPLGQAEWIKFVGLLLGREDKANKQFAAIKKRYNELKELTGRVTK--RPVVFSGEL 251
Query: 200 YNGVW------SFTKEAFK-------LKYVEDAGGENVD 225
G W SF + FK LK E +GG +D
Sbjct: 252 RGGNWYAVGGRSFLAQLFKDAGADYFLKDDEQSGGVTLD 290
>gi|311748248|ref|ZP_07722033.1| putative iron(III) ABC transporter, periplasmic iron-binding
protein [Algoriphagus sp. PR1]
gi|126576742|gb|EAZ80990.1| putative iron(III) ABC transporter, periplasmic iron-binding
protein [Algoriphagus sp. PR1]
Length = 381
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/189 (21%), Positives = 83/189 (43%), Gaps = 15/189 (7%)
Query: 142 EDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEFYN 201
E PL RAEWIKF G+ +A++++ V+ +Y + +P V Y
Sbjct: 188 EQHPLGRAEWIKFTGVLLGNFEKASEIFEEVENDYFEAVNLTENIPDDKRPSVLSGVMYQ 247
Query: 202 GVW-SFTKEAFKLKYVEDAGGENVDSSINKMTYNISNSDDLEQLHAILCTVDVVIDGTYT 260
+W + +++ K +++AGG + +N QL+ +D ID
Sbjct: 248 DIWYAPGADSWGAKILQNAGGNYI--------FNDQKGSGSLQLNYEFV-LDRAIDSEVW 298
Query: 261 LEPANYTQSTFLENIDAADKSCFAF--LTNQSLWRFDKRNQNSLALDWFDGAVSQPQLVL 318
+ +++ ++ + + AF N +++ + ++ + L++F+ +P L+L
Sbjct: 299 IGSSDFPS---IKQMGEMEPRYIAFKAFKNGNIYSYTQKKGPTGGLEYFELGYMRPDLIL 355
Query: 319 ADLTEALFP 327
DL + L P
Sbjct: 356 KDLIKILHP 364
>gi|167752517|ref|ZP_02424644.1| hypothetical protein ALIPUT_00768 [Alistipes putredinis DSM 17216]
gi|167659586|gb|EDS03716.1| hypothetical protein ALIPUT_00768 [Alistipes putredinis DSM 17216]
Length = 273
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/199 (21%), Positives = 83/199 (41%), Gaps = 20/199 (10%)
Query: 134 FANFAPFGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPI 193
F + E+ PL +AEW+ L + + + A+ Y L + A T +
Sbjct: 76 FMYVGDYLEESPLGKAEWMVVLSEVTGKREKGEKAFAAIPVRYNALKKKVADSTLGTPSV 135
Query: 194 VAWMEFYNGVWSFTKEAFKLKYVEDAGGENVDSSINKMTYNISNSDDLEQLHAILCTVDV 253
+ + + + + + +++ + + DAGG + K T N S DLE+ + + D+
Sbjct: 136 MLNVPYGDSWFMPSTQSYVARLITDAGGRYI---YQKNTGNASIPIDLEEAYLLASDADM 192
Query: 254 VIDGTYTLEPANYTQSTFLENIDAA-----DKSCFAFLTNQSLWRFDKRNQNSLALDWFD 308
+ N + L+++ A+ D CF N ++ + R + D+++
Sbjct: 193 WL---------NVGMANSLDDLKASCPKFTDTRCF---KNGEVYNNNARTNTAGGNDYYE 240
Query: 309 GAVSQPQLVLADLTEALFP 327
AV P +VL DL + P
Sbjct: 241 SAVVNPDIVLRDLVKIFHP 259
>gi|423250087|ref|ZP_17231103.1| hypothetical protein HMPREF1066_02113 [Bacteroides fragilis
CL03T00C08]
gi|423255587|ref|ZP_17236516.1| hypothetical protein HMPREF1067_03160 [Bacteroides fragilis
CL03T12C07]
gi|392651232|gb|EIY44897.1| hypothetical protein HMPREF1067_03160 [Bacteroides fragilis
CL03T12C07]
gi|392654149|gb|EIY47798.1| hypothetical protein HMPREF1066_02113 [Bacteroides fragilis
CL03T00C08]
Length = 382
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 93/209 (44%), Gaps = 29/209 (13%)
Query: 140 FGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLT-RVAAGKTKPFKPIVAWME 198
+ E PL +AEWIKF+G+F E AN+ + A++++Y L RVA K +P+V E
Sbjct: 193 YKEMTPLGQAEWIKFIGLFIGEEETANRKFAAIEKHYNELKERVAYVKK---RPVVFSGE 249
Query: 199 FYNGVW-SFTKEAFKLKYVEDAGGENVDSSINKMTYNISNSDDLEQLHAILCTVDV---- 253
G W + ++F + DAG D + + + D E +++ + D
Sbjct: 250 IRGGNWYAVGGKSFLAQLFRDAGA---DYFLKDDPRSGGVTLDFETVYSQAESADYWRIV 306
Query: 254 -VIDGTYTLEPANYTQSTFLENIDAADKSCFAFLTNQSLWRFDKRNQNSLALDWFDGAVS 312
DGT++ + L++ D AF ++ N +++ +
Sbjct: 307 NSFDGTFSYD--------VLKSEDTRYADFRAFREKGVIY------CNMREKPFYESMPT 352
Query: 313 QPQLVLADLTEALFP--TGNYTITYFRNI 339
QP++VL DL +A P +YT Y+ +
Sbjct: 353 QPEVVLEDLIKAFHPDLLPDYTPVYYERL 381
>gi|431799950|ref|YP_007226854.1| Fe3+-hydroxamate ABC transporter substrate-binding protein
[Echinicola vietnamensis DSM 17526]
gi|430790715|gb|AGA80844.1| ABC-type Fe3+-hydroxamate transport system, periplasmic component
[Echinicola vietnamensis DSM 17526]
Length = 379
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 76/191 (39%), Gaps = 19/191 (9%)
Query: 142 EDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEFYN 201
E PL RAEWIKF G A ++ +K NYL L + T P V Y
Sbjct: 188 EQHPLGRAEWIKFTGALTGRLKEATAYFDNIKSNYLNLKKAVQDTTFSAVPTVLSGNMYR 247
Query: 202 GVW-SFTKEAFKLKYVEDAGGENVDSSINKMTYNISNSDDLEQLHAILCTVDVVIDGTYT 260
+W + + + ++EDAG + + D E ++ + + V+D
Sbjct: 248 DIWYAPSGNNWGAIFLEDAGADYI-------------FKDQESAGSLQLSYETVLDKGLN 294
Query: 261 ----LEPANYTQSTFLENIDAADKSCFAFLTNQSLWRFDKRNQNSLALDWFDGAVSQPQL 316
+ A + + DA AF T +++ F + L++F+ ++P +
Sbjct: 295 ADIWISTAEFGSLAQMAAADARYTQFSAFQTG-NVYTFANTRGATGGLEYFELGYTRPDI 353
Query: 317 VLADLTEALFP 327
+L DL + P
Sbjct: 354 ILKDLIKIFHP 364
>gi|29347362|ref|NP_810865.1| iron ABC transporter substrate-binding protein [Bacteroides
thetaiotaomicron VPI-5482]
gi|160890450|ref|ZP_02071453.1| hypothetical protein BACUNI_02892 [Bacteroides uniformis ATCC 8492]
gi|167762440|ref|ZP_02434567.1| hypothetical protein BACSTE_00794 [Bacteroides stercoris ATCC
43183]
gi|189462337|ref|ZP_03011122.1| hypothetical protein BACCOP_03023 [Bacteroides coprocola DSM 17136]
gi|218129361|ref|ZP_03458165.1| hypothetical protein BACEGG_00938 [Bacteroides eggerthii DSM 20697]
gi|237723069|ref|ZP_04553550.1| Fe3 ABC transporter [Bacteroides sp. 2_2_4]
gi|255690294|ref|ZP_05413969.1| Fe3+ ABC transporter, periplasmic iron-binding protein [Bacteroides
finegoldii DSM 17565]
gi|265764139|ref|ZP_06092707.1| Fe3+ ABC transporter [Bacteroides sp. 2_1_16]
gi|293372608|ref|ZP_06618990.1| periplasmic binding protein [Bacteroides ovatus SD CMC 3f]
gi|299148342|ref|ZP_07041404.1| Fe3+ ABC transporter, periplasmic iron-binding protein [Bacteroides
sp. 3_1_23]
gi|317475327|ref|ZP_07934593.1| periplasmic binding protein [Bacteroides eggerthii 1_2_48FAA]
gi|317479039|ref|ZP_07938182.1| periplasmic binding protein [Bacteroides sp. 4_1_36]
gi|336405753|ref|ZP_08586424.1| hypothetical protein HMPREF0127_03737 [Bacteroides sp. 1_1_30]
gi|336411836|ref|ZP_08592296.1| hypothetical protein HMPREF1018_04314 [Bacteroides sp. 2_1_56FAA]
gi|375358092|ref|YP_005110864.1| putative iron-related ABC transport periplasmic binding protein
[Bacteroides fragilis 638R]
gi|383118724|ref|ZP_09939465.1| hypothetical protein BSHG_2738 [Bacteroides sp. 3_2_5]
gi|383123311|ref|ZP_09943992.1| hypothetical protein BSIG_2894 [Bacteroides sp. 1_1_6]
gi|390947633|ref|YP_006411393.1| Fe3+-hydroxamate ABC transporter periplasmic protein [Alistipes
finegoldii DSM 17242]
gi|423219287|ref|ZP_17205783.1| hypothetical protein HMPREF1061_02556 [Bacteroides caccae
CL03T12C61]
gi|423280600|ref|ZP_17259512.1| hypothetical protein HMPREF1203_03729 [Bacteroides fragilis HMW
610]
gi|423298234|ref|ZP_17276293.1| hypothetical protein HMPREF1070_04958 [Bacteroides ovatus
CL03T12C18]
gi|424664597|ref|ZP_18101633.1| hypothetical protein HMPREF1205_00472 [Bacteroides fragilis HMW
616]
gi|29339262|gb|AAO77059.1| Fe3+ ABC transporter, periplasmic iron-binding protein [Bacteroides
thetaiotaomicron VPI-5482]
gi|156860182|gb|EDO53613.1| periplasmic binding protein [Bacteroides uniformis ATCC 8492]
gi|167699546|gb|EDS16125.1| periplasmic binding protein [Bacteroides stercoris ATCC 43183]
gi|189430991|gb|EDU99975.1| periplasmic binding protein [Bacteroides coprocola DSM 17136]
gi|217988538|gb|EEC54859.1| periplasmic binding protein [Bacteroides eggerthii DSM 20697]
gi|229447591|gb|EEO53382.1| Fe3 ABC transporter [Bacteroides sp. 2_2_4]
gi|251839420|gb|EES67503.1| hypothetical protein BSIG_2894 [Bacteroides sp. 1_1_6]
gi|251946042|gb|EES86449.1| hypothetical protein BSHG_2738 [Bacteroides sp. 3_2_5]
gi|260624199|gb|EEX47070.1| periplasmic binding protein [Bacteroides finegoldii DSM 17565]
gi|263256747|gb|EEZ28093.1| Fe3+ ABC transporter [Bacteroides sp. 2_1_16]
gi|291515101|emb|CBK64311.1| ABC-type Fe3+-hydroxamate transport system, periplasmic component
[Alistipes shahii WAL 8301]
gi|292632417|gb|EFF51013.1| periplasmic binding protein [Bacteroides ovatus SD CMC 3f]
gi|298513103|gb|EFI36990.1| Fe3+ ABC transporter, periplasmic iron-binding protein [Bacteroides
sp. 3_1_23]
gi|301162773|emb|CBW22320.1| putative iron-related ABC transport periplasmic binding protein
[Bacteroides fragilis 638R]
gi|316904794|gb|EFV26605.1| periplasmic binding protein [Bacteroides sp. 4_1_36]
gi|316908581|gb|EFV30269.1| periplasmic binding protein [Bacteroides eggerthii 1_2_48FAA]
gi|335936659|gb|EGM98579.1| hypothetical protein HMPREF0127_03737 [Bacteroides sp. 1_1_30]
gi|335940180|gb|EGN02048.1| hypothetical protein HMPREF1018_04314 [Bacteroides sp. 2_1_56FAA]
gi|390424202|gb|AFL78708.1| ABC-type Fe3+-hydroxamate transport system, periplasmic component
[Alistipes finegoldii DSM 17242]
gi|392626053|gb|EIY20109.1| hypothetical protein HMPREF1061_02556 [Bacteroides caccae
CL03T12C61]
gi|392663650|gb|EIY57198.1| hypothetical protein HMPREF1070_04958 [Bacteroides ovatus
CL03T12C18]
gi|404575130|gb|EKA79873.1| hypothetical protein HMPREF1205_00472 [Bacteroides fragilis HMW
616]
gi|404583807|gb|EKA88480.1| hypothetical protein HMPREF1203_03729 [Bacteroides fragilis HMW
610]
Length = 379
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/199 (21%), Positives = 83/199 (41%), Gaps = 20/199 (10%)
Query: 134 FANFAPFGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPI 193
F + E+ PL +AEW+ L + + + A+ Y L + A T +
Sbjct: 182 FMYVGDYLEESPLGKAEWMVVLSEVTGKREKGEKAFAAIPVRYNALKKKVADSTLGTPSV 241
Query: 194 VAWMEFYNGVWSFTKEAFKLKYVEDAGGENVDSSINKMTYNISNSDDLEQLHAILCTVDV 253
+ + + + + + +++ + + DAGG + K T N S DLE+ + + D+
Sbjct: 242 MLNVPYGDSWFMPSTQSYVARLITDAGGRYI---YQKNTGNASIPIDLEEAYLLASDADM 298
Query: 254 VIDGTYTLEPANYTQSTFLENIDAA-----DKSCFAFLTNQSLWRFDKRNQNSLALDWFD 308
+ N + L+++ A+ D CF N ++ + R + D+++
Sbjct: 299 WL---------NVGMANSLDDLKASCPKFTDTRCF---KNGEVYNNNARTNTAGGNDYYE 346
Query: 309 GAVSQPQLVLADLTEALFP 327
AV P +VL DL + P
Sbjct: 347 SAVVNPDIVLRDLVKIFHP 365
>gi|53714316|ref|YP_100308.1| iron(III) ABC transporter periplasmic iron-binding protein
[Bacteroides fragilis YCH46]
gi|52217181|dbj|BAD49774.1| iron(III) ABC transporter periplasmic iron-binding protein
[Bacteroides fragilis YCH46]
Length = 379
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/199 (21%), Positives = 83/199 (41%), Gaps = 20/199 (10%)
Query: 134 FANFAPFGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPI 193
F + E+ PL +AEW+ L + + + A+ Y L + A T +
Sbjct: 182 FMYVGDYLEESPLGKAEWMVVLSEVTGKREKGEKAFAAIPVKYNALKKKVADSTLGTPSV 241
Query: 194 VAWMEFYNGVWSFTKEAFKLKYVEDAGGENVDSSINKMTYNISNSDDLEQLHAILCTVDV 253
+ + + + + + +++ + + DAGG + K T N S DLE+ + + D+
Sbjct: 242 MLNVPYGDSWFMPSTQSYVARLITDAGGRYI---YQKNTGNASIPIDLEEAYLLASDADM 298
Query: 254 VIDGTYTLEPANYTQSTFLENIDAA-----DKSCFAFLTNQSLWRFDKRNQNSLALDWFD 308
+ N + L+++ A+ D CF N ++ + R + D+++
Sbjct: 299 WL---------NVGMANSLDDLKASCPKFTDTRCF---KNGEVYNNNARTNTAGGNDYYE 346
Query: 309 GAVSQPQLVLADLTEALFP 327
AV P +VL DL + P
Sbjct: 347 SAVVNPDIVLRDLVKIFHP 365
>gi|313145704|ref|ZP_07807897.1| periplasmic binding protein [Bacteroides fragilis 3_1_12]
gi|313134471|gb|EFR51831.1| periplasmic binding protein [Bacteroides fragilis 3_1_12]
Length = 380
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 92/203 (45%), Gaps = 19/203 (9%)
Query: 142 EDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEFYN 201
E L RAEWIKF+G + EA A+ ++ + + Y + + A + + P + + Y
Sbjct: 189 EKSILGRAEWIKFVGALFDKEALADSIFGQIAKQYNEVKKSAEKFS--YAPSILSGQDYR 246
Query: 202 GVWSFT-KEAFKLKYVEDAGGENVDSSINKMTYNISNSDDLEQLHAILCTVDVVIDGTYT 260
G WS ++ + DAG ++ + +IS+S + +H D+ +
Sbjct: 247 GTWSMPGGRSYSAQLFRDAGANYYYANDTTASGSISSSIEEALIH--FNQADIWVG---- 300
Query: 261 LEPANYTQSTFLENIDAADK--SCFAFLTNQSLWRFDKRNQNSLALDWFDGAVSQPQLVL 318
Q+ LE + D F + +++ +KR + D+++ V++P L+L
Sbjct: 301 ------VQANTLEELGRMDPKYKLFKSYKDGNVYHINKRTNATGGNDYWESGVARPDLLL 354
Query: 319 ADLTEALFPT--GNYTITYFRNI 339
+D+ + + PT +Y +TY +
Sbjct: 355 SDMIKIVHPTLLPDYELTYMDKL 377
>gi|423279664|ref|ZP_17258577.1| hypothetical protein HMPREF1203_02794 [Bacteroides fragilis HMW
610]
gi|404584652|gb|EKA89296.1| hypothetical protein HMPREF1203_02794 [Bacteroides fragilis HMW
610]
Length = 380
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 91/200 (45%), Gaps = 19/200 (9%)
Query: 142 EDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEFYN 201
E L RAEWIKF+G + EA A+ ++ + + Y + + A + + P + + Y
Sbjct: 189 EKSILGRAEWIKFVGALFDKEALADSIFGRIAKQYNEVKKSAEKFS--YAPSILSGQDYR 246
Query: 202 GVWSFT-KEAFKLKYVEDAGGENVDSSINKMTYNISNSDDLEQLHAILCTVDVVIDGTYT 260
G WS ++ + DAG ++ + +IS+S + +H D+ +
Sbjct: 247 GTWSMPGGRSYSAQLFRDAGANYYYANDTTASGSISSSIEEALIH--FNQADIWVG---- 300
Query: 261 LEPANYTQSTFLENIDAADK--SCFAFLTNQSLWRFDKRNQNSLALDWFDGAVSQPQLVL 318
Q+ LE + D F + +++ +KR + D+++ V++P L+L
Sbjct: 301 ------VQANTLEELGRMDSKYKLFKSYKDGNVYHINKRTNATGGNDYWESGVARPDLLL 354
Query: 319 ADLTEALFPT--GNYTITYF 336
+D+ + + PT +Y +TY
Sbjct: 355 SDMIKIVHPTLLPDYELTYM 374
>gi|319902035|ref|YP_004161763.1| periplasmic binding protein [Bacteroides helcogenes P 36-108]
gi|319417066|gb|ADV44177.1| periplasmic binding protein [Bacteroides helcogenes P 36-108]
Length = 389
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 45/84 (53%), Gaps = 3/84 (3%)
Query: 140 FGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEF 199
+ E PL +AEWIKF+G+F EA AN + +++ Y L +AA K +P+V E
Sbjct: 200 YKEMTPLGQAEWIKFIGMFIGKEAEANAKFATIEKRYNELKELAANVKK--RPVVFSGEI 257
Query: 200 YNGVW-SFTKEAFKLKYVEDAGGE 222
G W + ++F + DAG +
Sbjct: 258 RGGNWYAVGGKSFLAQLFRDAGAD 281
>gi|423257429|ref|ZP_17238352.1| hypothetical protein HMPREF1055_00629 [Bacteroides fragilis
CL07T00C01]
gi|423265604|ref|ZP_17244607.1| hypothetical protein HMPREF1056_02294 [Bacteroides fragilis
CL07T12C05]
gi|387777797|gb|EIK39893.1| hypothetical protein HMPREF1055_00629 [Bacteroides fragilis
CL07T00C01]
gi|392703262|gb|EIY96406.1| hypothetical protein HMPREF1056_02294 [Bacteroides fragilis
CL07T12C05]
Length = 382
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 93/209 (44%), Gaps = 29/209 (13%)
Query: 140 FGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLT-RVAAGKTKPFKPIVAWME 198
+ E PL +AEWIKF+G+F E AN+ + A++++Y L RVA K +P+V E
Sbjct: 193 YKEMTPLGQAEWIKFIGLFIGEEETANRKFAAIEKHYNELKERVAYVKK---RPVVFSGE 249
Query: 199 FYNGVW-SFTKEAFKLKYVEDAGGENVDSSINKMTYNISNSDDLEQLHAILCTVDV---- 253
G W + ++F + DAG D + + + D E +++ + D
Sbjct: 250 IRGGNWYAVGGKSFLAQLFRDAGA---DYFLKDDPRSGGVTLDFETVYSQAESADYWRIV 306
Query: 254 -VIDGTYTLEPANYTQSTFLENIDAADKSCFAFLTNQSLWRFDKRNQNSLALDWFDGAVS 312
DGT++ + L++ D AF ++ N +++ +
Sbjct: 307 NSFDGTFSYD--------VLKSEDTRYADFRAFREKGVIY------CNMREKPFYESMPT 352
Query: 313 QPQLVLADLTEALFP--TGNYTITYFRNI 339
QP++VL DL +A P +YT Y+ +
Sbjct: 353 QPEVVLEDLIKAFHPDLLPDYTPVYYERL 381
>gi|441519408|ref|ZP_21001081.1| hypothetical protein GSI01S_01_00040 [Gordonia sihwensis NBRC
108236]
gi|441460666|dbj|GAC59042.1| hypothetical protein GSI01S_01_00040 [Gordonia sihwensis NBRC
108236]
Length = 398
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 77/347 (22%), Positives = 133/347 (38%), Gaps = 43/347 (12%)
Query: 6 SKVEDAQNFHIYYGQTFKVIKNAIDGR-----SYLLIQNNSRMAARTKYCTARIKSFVIP 60
S +EDA I Y ++++V+ A + SY+L++ + T + V
Sbjct: 53 STIEDATGLTIEYHRSYQVVTVAHPAQGAPPASYVLVRCGAPAPELTGELADAPQVEVPV 112
Query: 61 MSNYSVDTDFFPGK--------LLGLLSSMKGMTSESVASGCVLKLYQGGEIGLVNKSEP 112
+ Y+ T PG + G+ ++ T E V K+ Q + G VN +E
Sbjct: 113 RTVYAGSTTHLPGLAALGAADAVTGVATTGFVSTPEIVERIDAGKVQQFTDAGAVN-AEK 171
Query: 113 LQFSQYAAHFTTDSDQPQACNFANF-------APFGEDGPLRRAEWIKFLGIFANAEARA 165
+ + T SD P + A + E+ PL RAEW+KF E +A
Sbjct: 172 VIAGRPDVLVTDGSDSPAFGKIRDAGIPVLADADWLEESPLGRAEWLKFFAALTGTEKQA 231
Query: 166 NQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEFYNGVWSF-TKEAFKLKYVEDAGGENV 224
+ VY +K Y + +G K P++ NG W+ + ++ K V DAG
Sbjct: 232 SSVYQNIKSQYRSVADRLSGVPK--TPVL-LGSIANGSWTMPSGGSYFGKLVADAGATYP 288
Query: 225 ---DSSINKMTYNISNSDDLEQLHAILCTVDVVIDGTYTLEPANYTQSTFLENIDAADKS 281
D + + +I + + A+ D ++ + ++D D
Sbjct: 289 WIDDRAAGSLQLSIESVIARARDSAVWLLSDPTVNS--------------VADLDKQDPR 334
Query: 282 CFAFL-TNQSLWRFDKRNQNSLALDWFDGAVSQPQLVLADLTEALFP 327
AF + W K + D+++ V +P LVLAD+ P
Sbjct: 335 YRAFAGPAKQAWNSTKAVNSGGGNDYWETGVLRPDLVLADIAAIAHP 381
>gi|224025296|ref|ZP_03643662.1| hypothetical protein BACCOPRO_02035 [Bacteroides coprophilus DSM
18228]
gi|237711852|ref|ZP_04542333.1| Fe3+ ABC transporter [Bacteroides sp. 9_1_42FAA]
gi|317475005|ref|ZP_07934274.1| periplasmic binding protein [Bacteroides eggerthii 1_2_48FAA]
gi|336414171|ref|ZP_08594518.1| hypothetical protein HMPREF1017_01626 [Bacteroides ovatus
3_8_47FAA]
gi|365118013|ref|ZP_09336813.1| hypothetical protein HMPREF1033_00159 [Tannerella sp.
6_1_58FAA_CT1]
gi|404484594|ref|ZP_11019798.1| hypothetical protein HMPREF9448_00204 [Barnesiella intestinihominis
YIT 11860]
gi|224018532|gb|EEF76530.1| hypothetical protein BACCOPRO_02035 [Bacteroides coprophilus DSM
18228]
gi|229454547|gb|EEO60268.1| Fe3+ ABC transporter [Bacteroides sp. 9_1_42FAA]
gi|316908908|gb|EFV30593.1| periplasmic binding protein [Bacteroides eggerthii 1_2_48FAA]
gi|335934320|gb|EGM96317.1| hypothetical protein HMPREF1017_01626 [Bacteroides ovatus
3_8_47FAA]
gi|363650907|gb|EHL89990.1| hypothetical protein HMPREF1033_00159 [Tannerella sp.
6_1_58FAA_CT1]
gi|404339599|gb|EJZ66030.1| hypothetical protein HMPREF9448_00204 [Barnesiella intestinihominis
YIT 11860]
Length = 379
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 82/200 (41%), Gaps = 22/200 (11%)
Query: 134 FANFAPFGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPI 193
F + E+ PL +AEW+ L A+ +V+ + Y L + +G P
Sbjct: 182 FMYVGDYLEESPLGKAEWLVALSEVVGKRAKGEKVFADIPIRYNALKQKVSGAVLD-APS 240
Query: 194 VAWMEFYNGVWSF-TKEAFKLKYVEDAGGENVDSSINKMTYNISNSDDLEQLHAILCTVD 252
V Y W + E + ++ + DAGG+ + K T N S DLE+ + + D
Sbjct: 241 VMLNTPYGDSWFMPSTENYAVRLITDAGGDYI---YKKNTGNSSTPIDLEEAYLLASEAD 297
Query: 253 VVIDGTYTLEPANYTQSTFLENIDA-----ADKSCFAFLTNQSLWRFDKRNQNSLALDWF 307
+ + N + L+ + A AD C + N ++ + R + D++
Sbjct: 298 MWL---------NVGMANTLDELKAACPKFADTRC---VRNGYVYNNNARTNAAGGNDYY 345
Query: 308 DGAVSQPQLVLADLTEALFP 327
+ AV P L+L DL + P
Sbjct: 346 ESAVVNPDLLLRDLVKIFHP 365
>gi|160886692|ref|ZP_02067695.1| hypothetical protein BACOVA_04704 [Bacteroides ovatus ATCC 8483]
gi|298383533|ref|ZP_06993094.1| Fe3+ ABC transporter, periplasmic iron-binding protein [Bacteroides
sp. 1_1_14]
gi|345519778|ref|ZP_08799189.1| Fe3+ ABC transporter [Bacteroides sp. 4_3_47FAA]
gi|156107103|gb|EDO08848.1| periplasmic binding protein [Bacteroides ovatus ATCC 8483]
gi|254836352|gb|EET16661.1| Fe3+ ABC transporter [Bacteroides sp. 4_3_47FAA]
gi|298263137|gb|EFI06000.1| Fe3+ ABC transporter, periplasmic iron-binding protein [Bacteroides
sp. 1_1_14]
Length = 379
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 82/201 (40%), Gaps = 24/201 (11%)
Query: 134 FANFAPFGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCL-TRVAAGKTKPFKP 192
F + E+ PL +AEW+ L A +V+ + Y L RV P
Sbjct: 182 FMYVGDYLEESPLGKAEWLVALAEVAGKRTEGEKVFAEIPVRYNALKKRVTDAAID--AP 239
Query: 193 IVAWMEFYNGVWSF-TKEAFKLKYVEDAGGENVDSSINKMTYNISNSDDLEQLHAILCTV 251
V Y W + E++ + ++DAGG+ + K T N S DLE+ + + V
Sbjct: 240 SVMLNTPYGDNWFMPSTESYVARLIKDAGGDYI---YKKNTGNASAPIDLEEAYLLASQV 296
Query: 252 DVVIDGTYTLEPANYTQSTFLENIDAA-----DKSCFAFLTNQSLWRFDKRNQNSLALDW 306
D+ + + + L+ + AA D CF N ++ + R + D+
Sbjct: 297 DMWL---------HVGMANTLDELRAACPKFTDTRCF---RNGYVYNNNARTNAAGGNDY 344
Query: 307 FDGAVSQPQLVLADLTEALFP 327
++ AV P LVL DL + P
Sbjct: 345 YESAVVNPDLVLRDLVKIFHP 365
>gi|305667324|ref|YP_003863611.1| ABC transporter periplasmic-binding protein [Maribacter sp.
HTCC2170]
gi|88709372|gb|EAR01605.1| periplasmic-binding protein of ABC transporter [Maribacter sp.
HTCC2170]
Length = 381
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 83/191 (43%), Gaps = 21/191 (10%)
Query: 142 EDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEFYN 201
E+ PL +AEWIKF F E A+ ++ + +Y +A K +P V Y
Sbjct: 192 EETPLGKAEWIKFFAPFFQKEQLADSIFKEISNSYNQAKSLA--KKAKNRPTVLSGALYK 249
Query: 202 GVWSFT-KEAFKLKYVEDAGGENVDSSINKMTYNISNSDDLEQLHAILCTVDVVI----D 256
VW ++ K++EDA E Y S D EQ ++ +++ V+ D
Sbjct: 250 DVWYLPGGNSWAAKFIEDANTE----------YPWS---DNEQTGSLNMSIESVLAEGHD 296
Query: 257 GTYTLEPANYTQSTFLENIDAADKSCFAFLTNQSLWRFDKRNQNSLALDWFDGAVSQPQL 316
+ + P+ + ++N + AF N++++ F ++ L +++ A ++P
Sbjct: 297 TDFWISPSQFISYEEMKNANVHYLKFKAF-QNKNIYTFANTKGDTGGLLYYELAPNRPDW 355
Query: 317 VLADLTEALFP 327
VL DL P
Sbjct: 356 VLKDLIHIFHP 366
>gi|374385641|ref|ZP_09643144.1| hypothetical protein HMPREF9449_01530 [Odoribacter laneus YIT
12061]
gi|373225343|gb|EHP47677.1| hypothetical protein HMPREF9449_01530 [Odoribacter laneus YIT
12061]
Length = 382
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 43/84 (51%), Gaps = 3/84 (3%)
Query: 140 FGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEF 199
+ E PL +AEWIK +G+ E A++++N ++ Y L + A +P+V E
Sbjct: 192 YKETTPLGQAEWIKLIGLLTGKEKEASEIFNGIENRYNTLKKRTANLQS--RPVVLSGEI 249
Query: 200 YNGVW-SFTKEAFKLKYVEDAGGE 222
+ G W + +F + +DAG +
Sbjct: 250 HGGTWYAVGGRSFLAQVFQDAGAD 273
>gi|301310393|ref|ZP_07216332.1| putative lipoprotein [Bacteroides sp. 20_3]
gi|423336641|ref|ZP_17314388.1| hypothetical protein HMPREF1059_00340 [Parabacteroides distasonis
CL09T03C24]
gi|300831967|gb|EFK62598.1| putative lipoprotein [Bacteroides sp. 20_3]
gi|409240521|gb|EKN33299.1| hypothetical protein HMPREF1059_00340 [Parabacteroides distasonis
CL09T03C24]
Length = 387
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 46/99 (46%), Gaps = 13/99 (13%)
Query: 140 FGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEF 199
+ E PL +AEWIKF+G+ E N+ + A+++ Y L + A +PIV E
Sbjct: 196 YKETTPLGQAEWIKFIGLLLGVEKEGNERFAAIEKRYNELKELTADGNVKKRPIVFSGEL 255
Query: 200 YNGVW------SFTKEAFK-------LKYVEDAGGENVD 225
G W SF + FK LK E +GG +D
Sbjct: 256 RGGNWYAVGGKSFLAQLFKDAGADYFLKDDERSGGVTLD 294
>gi|158315340|ref|YP_001507848.1| periplasmic binding protein [Frankia sp. EAN1pec]
gi|158110745|gb|ABW12942.1| periplasmic binding protein [Frankia sp. EAN1pec]
Length = 398
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 80/189 (42%), Gaps = 18/189 (9%)
Query: 142 EDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEFYN 201
E PL RAEW+KF+ EA+A +V++ ++ +Y + G T+P ++ M Y
Sbjct: 210 ESDPLGRAEWVKFMAALTGDEAKAAKVFDQIEADYKAIAAKVPG-TEPTAALIGTM--YQ 266
Query: 202 GVWSF-TKEAFKLKYVEDAGGENVDSSINKMTYNISNSDDLEQLHAILCTVDVVIDGTYT 260
GVW + ++ K + DAG +Y ++ D L V G
Sbjct: 267 GVWYMPSGGSYVGKLLADAG----------ASYPWADETDTGSLELDFEKV-FTESGGAP 315
Query: 261 LEPANYTQSTFLENIDAADK--SCFAFLTNQSLWRFDKRNQNSLALDWFDGAVSQPQLVL 318
+ A+ T L ++ A D A + + +W D+++ V++P LVL
Sbjct: 316 IWLADGEWKT-LADVTADDSRYGELAAVRDGQVWTNTLTMGPGGGNDYWERGVTRPDLVL 374
Query: 319 ADLTEALFP 327
DL L P
Sbjct: 375 GDLVAILHP 383
>gi|308810535|ref|XP_003082576.1| periplasmic-binding protein of ABC transporter alr4031 (ISS)
[Ostreococcus tauri]
gi|116061045|emb|CAL56433.1| periplasmic-binding protein of ABC transporter alr4031 (ISS)
[Ostreococcus tauri]
Length = 519
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 98/235 (41%), Gaps = 29/235 (12%)
Query: 146 LRRAEWIKFLGIFANAEARANQVYNAVKE--NYLCLTRVAAGKTKPFKPIV--AWMEFYN 201
L+R E IKFL +F N EA AN Y E NY+ +A + + AW+
Sbjct: 231 LQRTEQIKFLSLFFNKEAEANAYYADQVERWNYMSSLIASAQSQGRLRSGLKCAWVTASG 290
Query: 202 GVWSFTKEAFKLKYVEDAGGEN-VDSSINKMTYNISNSDDLEQLHAILCTVDVVIDGTYT 260
G ++ + +K AG S ++ ++ ++ E + V +VID +Y
Sbjct: 291 GSYTVSWAKYKDDICTAAGLTTYAQSGVSGTSHTFPST---EAYLTAMAGVSIVIDESYF 347
Query: 261 LEPA-NYTQSTFLENIDAADKSCFAFLTNQSL-WRFDKRNQN------------SLALDW 306
P+ + T++ N+D ++ + + + R DK + S + W
Sbjct: 348 YNPSTSATKTAVHANLDFTGRTLPSMNSATGMILRLDKHVSDGDPLYAPAGYYPSEGMAW 407
Query: 307 FDGAVSQPQLVLADLTEALFPT--GNYTI-----TYFRNIAKGEGVVNIDAKMCD 354
F+ P LVLAD + ++ + G I +FR++ +GV+ A CD
Sbjct: 408 FEDPYVHPALVLADFAQLVWFSSFGIEAIRAGCPRFFRDVNSDDGVIKTTASDCD 462
>gi|406883258|gb|EKD30888.1| hypothetical protein ACD_77C00459G0018 [uncultured bacterium]
Length = 366
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 89/207 (42%), Gaps = 34/207 (16%)
Query: 142 EDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIV--AWMEF 199
E+ PL + E++K G +A+ +Y+ K YL L ++ G T K ++ W E
Sbjct: 178 EEHPLGKLEYLKLFGEIFGIREKADSIYDCSKIRYLNLKQLTEG-TPNVKVLINAPWKE- 235
Query: 200 YNGVWSFT-KEAFKLKYVEDAGGENVDSSINKMTYNISNSDDLEQLHAILCTVDVVIDGT 258
VW ++ + DAGGE + S K + N LE++++ I+
Sbjct: 236 ---VWYIPGGRSYMSTLINDAGGEIILSDKEKQAIHTYN---LEKVYS------RAIEAE 283
Query: 259 YTLEPANYT-------QSTFLENIDAADKSCFAFLTNQSLWRFDKRNQNSLALDWFDGAV 311
+ L P NY+ + +NI K + N + RN + D+++ V
Sbjct: 284 FWLNPNNYSTIDELKLSNPLFKNIPCLQK---GLVYNNTF-----RNTSEGGSDFWERGV 335
Query: 312 SQPQLVLADLTEALFPT--GNYTITYF 336
+P ++L DL + L P +T+ Y+
Sbjct: 336 VEPDIILRDLIKILHPELDRKWTLKYY 362
>gi|390442973|ref|ZP_10230772.1| ABC transporter substrate-binding protein [Nitritalea
halalkaliphila LW7]
gi|389667281|gb|EIM78704.1| ABC transporter substrate-binding protein [Nitritalea
halalkaliphila LW7]
Length = 398
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 77/190 (40%), Gaps = 20/190 (10%)
Query: 140 FGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKT-------KPFKP 192
F E PL RAEW K +G A A +V+ ++ Y L AA + KP P
Sbjct: 198 FIEPHPLGRAEWCKVIGAVVGHYAAAEEVFESIAARYEALREKAAARKSAQRSDQKP--P 255
Query: 193 IVAWMEFYNGVWSF-TKEAFKLKYVEDAGGENVDSSINKMTYNISNSDDLEQLHAILCTV 251
V Y +W + +++ + + DAGG + + S + EQ+ +
Sbjct: 256 RVMTGNLYQDIWYVPSADSWSTQLIRDAGGHYLFEELKGAG---SQTLSFEQV------L 306
Query: 252 DVVIDGTYTLEPANYTQSTFLENIDAADKSCFAFLTNQSLWRFDKRNQNSLALDWFDGAV 311
D +D L P++ L D + F Q ++ F + + L +F+ A
Sbjct: 307 DRALDADIWLGPSDIPSLAALALSD-QRYTYFTPFKTQKVFSFGLKKSATGGLPYFEIAY 365
Query: 312 SQPQLVLADL 321
+P L+L DL
Sbjct: 366 LRPDLILEDL 375
>gi|345867134|ref|ZP_08819151.1| periplasmic binding protein [Bizionia argentinensis JUB59]
gi|344048348|gb|EGV43955.1| periplasmic binding protein [Bizionia argentinensis JUB59]
Length = 385
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 82/194 (42%), Gaps = 27/194 (13%)
Query: 142 EDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEFYN 201
E PL +AEWIKF G+ N +A+ V+ ++ +YL ++A T P V +
Sbjct: 196 ETSPLAKAEWIKFFGVLYNKSEQADTVFRKIESDYLEAKKLAQNATNI--PRVLSGAMHK 253
Query: 202 GVWSF----TKEAFKLKYVEDAGGENVDSSINKMTYNISNSDDL----EQLHAILCTVDV 253
+W + EA LK D+++N + N + L E ++ D+
Sbjct: 254 DIWYLPSGTSPEAQLLK----------DANVNYLWQNTDSKGSLALNFEAVYEKAKDADI 303
Query: 254 VIDGTYTLEPANYTQSTFLENIDAADKSCFAFLTNQSLWRFDKRNQNSLALDWFDGAVSQ 313
I P+ Y LE +A AF N++++ F + + +++ ++
Sbjct: 304 WIS------PSYYGSYEALEKANAHYTQFDAF-KNKTIYSFVNTAGETGGVTYYEIGTAR 356
Query: 314 PQLVLADLTEALFP 327
P LVL DL + P
Sbjct: 357 PDLVLKDLVKIAHP 370
>gi|412987566|emb|CCO20401.1| predicted protein [Bathycoccus prasinos]
Length = 532
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 89/225 (39%), Gaps = 35/225 (15%)
Query: 137 FAPFGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVA- 195
F +D + RAEW+KF+ +F + E AN+ Y A++ + V A KT K IVA
Sbjct: 247 FHGNADDTAILRAEWVKFVSLFFDKEQFANE-YFALESD-----AVEAIKTYVEKGIVAS 300
Query: 196 --------WMEFYNGVWSFTKEAFKLKYVEDAGGENVDSSINKMTYNISNSDDLEQLHAI 247
W++ + + F+ DAG + + E H+
Sbjct: 301 LSEKKTCVWVQKMGSYYEILHDTFRTSLCVDAGMLAYQGEAGFLKKAFAIDTQQEAFHSA 360
Query: 248 LCTVDVVIDGTYTLEPANYTQSTFLENIDAADKSCFAFLTNQS----------LWRFDKR 297
+ DVV+D +Y + ++ +S + N+ F L+ Q+ L R D
Sbjct: 361 IRDYDVVVDESYFYDVSSLNRSAYESNL------AFDQLSGQTVKAKDGNGGLLLRVDAS 414
Query: 298 NQNSLALDWFDGAVSQPQLVLADLTEALF----PTGNYTITYFRN 338
N + D + +P L+L DL ++ + YFRN
Sbjct: 415 RGNGMTDDLKESGEVRPALLLNDLVTNVYGGTLSNDDACPKYFRN 459
>gi|126661896|ref|ZP_01732895.1| periplasmic-binding protein of ABC transporter [Flavobacteria
bacterium BAL38]
gi|126625275|gb|EAZ95964.1| periplasmic-binding protein of ABC transporter [Flavobacteria
bacterium BAL38]
Length = 376
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 90/200 (45%), Gaps = 13/200 (6%)
Query: 142 EDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEFYN 201
E PL +AEWIKF G + + +A +++N++++ Y L A KTK +P + Y
Sbjct: 187 EKTPLGKAEWIKFFGALYDLDEKATEIFNSIEKEY-NLALNLAKKTKK-QPTIFAGAIYE 244
Query: 202 GVWSFTKEAFKLKYVEDAGGENVDSSINKMTYNISNSDDLEQLHAILCTVDVVIDGTYTL 261
W + Y G N +K T +++ S + +D D + +
Sbjct: 245 DQWFLPQGDSWAAYFLKEGNGNYLWKDSKGTGSLALSFE--------SVLDKAKDADFWI 296
Query: 262 EPANYTQSTFLENIDAADKSCFAFLTNQSLWRFDKRNQNSLALDWFDGAVSQPQLVLADL 321
P +T + N + + F + +++++ F + + + +++ A ++P LVL D+
Sbjct: 297 GPGQFTSIQEILN-NNPNYIHFKAVASKNIYSFSTKKGKTGGVIYYELAQNRPDLVLKDI 355
Query: 322 TEALFPT--GNYTITYFRNI 339
+ L P +Y + +F +
Sbjct: 356 MKILHPEVLPDYELFFFEKL 375
>gi|294778601|ref|ZP_06744023.1| periplasmic binding protein [Bacteroides vulgatus PC510]
gi|294447550|gb|EFG16128.1| periplasmic binding protein [Bacteroides vulgatus PC510]
Length = 383
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 48/99 (48%), Gaps = 15/99 (15%)
Query: 140 FGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEF 199
+ E PL +AEWIKF+G+ E +AN+ + +K+ Y L + TK +P+V E
Sbjct: 194 YKEMTPLGQAEWIKFVGLLLGREDKANEQFATIKKRYNELKELTGRVTK--RPVVFSGEL 251
Query: 200 YNGVW------SFTKEAFK-------LKYVEDAGGENVD 225
G W SF + FK LK E +GG +D
Sbjct: 252 RGGNWYAVGGRSFLAQLFKDAGADYFLKDDEQSGGVTLD 290
>gi|423131749|ref|ZP_17119424.1| hypothetical protein HMPREF9714_02824 [Myroides odoratimimus CCUG
12901]
gi|371641388|gb|EHO06973.1| hypothetical protein HMPREF9714_02824 [Myroides odoratimimus CCUG
12901]
Length = 381
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 85/205 (41%), Gaps = 22/205 (10%)
Query: 142 EDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFK--PIVAWMEF 199
E PL +AEWIK G E A ++ + ++Y + A K K P V
Sbjct: 191 EQTPLGKAEWIKLFGALYGKEKEAKIFFDKIVQDY----KEAQALVKDAKNNPTVMSGAM 246
Query: 200 YNGVWSFTK-EAFKLKYVEDAGGENVDSSINKMTYNISNSDDLEQLHAILCTVDVVIDGT 258
Y VW + +++ Y +DA + + M S S LE +D ID +
Sbjct: 247 YQDVWYTPQGQSWMAIYFKDAKSDYLWKETEGMG---SLSLSLE------VVLDKAIDAS 297
Query: 259 YTLEPANYTQSTFLENIDA-ADKSCFAFLTNQSLWRFDKRNQNSLALDWFDGAVSQPQLV 317
+ + PA Y T + +DA + F N++++ F R + +++ ++P LV
Sbjct: 298 FWINPAQY--ETLQQLVDANPHYAKFNAFKNKNVYSFSPRKGETGGSLFYELGPTRPDLV 355
Query: 318 LADLTEALFP---TGNYTITYFRNI 339
L DL L P NY +F +
Sbjct: 356 LKDLIYILHPEISIPNYQPVFFEQL 380
>gi|443245162|ref|YP_007378387.1| putative iron(III) ABC transporter periplasmic iron-binding protein
[Nonlabens dokdonensis DSW-6]
gi|442802561|gb|AGC78366.1| putative iron(III) ABC transporter periplasmic iron-binding protein
[Nonlabens dokdonensis DSW-6]
Length = 383
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 65/298 (21%), Positives = 117/298 (39%), Gaps = 50/298 (16%)
Query: 54 IKSFVIPMSNYSVDTDFFPGKLLGLLSSMKGMTS-ESVASGCVLKLYQGGEIGLVNKSEP 112
IKS V+ + T P LL S+KG S + +++ V L + G++ + +E
Sbjct: 96 IKSIVLTST-----THIPPLVLLNEEKSLKGFPSTDYISAPEVRTLIEDGKVEELGANET 150
Query: 113 LQFSQ-------YAAHFTTDSDQPQACNFANFA-------PFGEDGPLRRAEWIKFLGIF 158
+ + F+ D+ P + E PL +AEWIK G+
Sbjct: 151 MNVERTIMLAPDLVMGFSIDASNPVYQKIEKVGIPVIYNGEWVEKHPLAKAEWIKLFGVL 210
Query: 159 ANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPI--VAWMEFYNGVWSFTKEAFKLKYV 216
E +A+ ++ +++ YL + +P K I W E + + ++++ K +
Sbjct: 211 YGKEQQADSIFQSIENEYLNTLELVKNVKRP-KVISGATWKEQWYLPYG---DSWQGKIL 266
Query: 217 EDAGGENV---DSSINKMTYNISNSDDLEQLHAILCTVDVVIDG---TYTLEPANYTQ-S 269
DAG + + + YNI V++DG + + PA YT S
Sbjct: 267 NDAGANYIYQETTGTGSLAYNIEK---------------VLVDGNDAAFWIAPAQYTSYS 311
Query: 270 TFLENIDAADKSCFAFLTNQSLWRFDKRNQNSLALDWFDGAVSQPQLVLADLTEALFP 327
+E D F N+ ++ + +++ A +P LVL DL + L P
Sbjct: 312 KMIE--DNKSYQLFDAFKNKQVYTHALTVGAKGGVTYYEEASMRPDLVLKDLVKILHP 367
>gi|258655329|ref|YP_003204485.1| iron hydroxamate ABC transporter periplasmic protein [Nakamurella
multipartita DSM 44233]
gi|258558554|gb|ACV81496.1| ABC-type Fe3+-hydroxamate transport system periplasmic
component-like protein [Nakamurella multipartita DSM
44233]
Length = 414
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 82/356 (23%), Positives = 139/356 (39%), Gaps = 61/356 (17%)
Query: 6 SKVEDAQNFHIYYGQTFKV--IKNAIDG---RSYLLIQNNSRMAARTKYCTARIKSFVIP 60
S++ A NF I Y +++V + G SY+L++ + T A + P
Sbjct: 71 SQITHATNFAISYHDSYQVLTVPQPTQGGAPESYVLVKCGAPTPELTGDL-AGAQVITTP 129
Query: 61 MSN-YSVDTDFFP--------GKLLGLLSSMKGMTSES-----VASGCVLKLYQGGEIGL 106
+S+ YS T P L G+ KG SE VA V++ G +
Sbjct: 130 VSSLYSASTTHLPFLVELDQLDTLTGV--GTKGFISEKQVQDRVAEPGVVEFSAAGTV-- 185
Query: 107 VNKSEPLQFSQYAAHFTTDSDQP-----QACNFANFA--PFGEDGPLRRAEWIKFLGIFA 159
+E + Q T +D P +A A + ED PL RAE++K+
Sbjct: 186 --DAEAVIAGQPDVLVTAGTDDPGYAVVKAAGIPVLANADWLEDDPLGRAEYLKYFAALT 243
Query: 160 NAEARANQVYNAVKENYLCLTRVAAGKTKPFKPI-VAWMEFYNGVWSFT-KEAFKLKYVE 217
E +A ++ V+ +Y L A + P+ V + + G W +++ + ++
Sbjct: 244 GTEQQAAAAFDTVERSYQEL----AASVQDANPVAVVPGQPFQGTWYIPGGKSYTTRLIQ 299
Query: 218 DAGGEN--VDSSINKMTYNISNSDDLEQLHAILCTVDVVIDGTYTLEPANYTQSTFLENI 275
DAGG D + + S DLE + A T PA +T+ +
Sbjct: 300 DAGGTTAWADDATSG-----SIPTDLETVLAKAGTA-----------PAWLASTTWTTTV 343
Query: 276 DAADK----SCFAFLTNQSLWRFDKRNQNSLALDWFDGAVSQPQLVLADLTEALFP 327
A + + FA + ++W K ++++ V++P LVL DL L P
Sbjct: 344 QALAEEPRLAEFAAMKAGNVWNAAKDVTADGGNNFYELGVARPDLVLGDLVAILHP 399
>gi|390945314|ref|YP_006409075.1| Fe3+-hydroxamate ABC transporter periplasmic protein [Belliella
baltica DSM 15883]
gi|390418742|gb|AFL86320.1| ABC-type Fe3+-hydroxamate transport system, periplasmic component
[Belliella baltica DSM 15883]
Length = 382
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/208 (19%), Positives = 89/208 (42%), Gaps = 27/208 (12%)
Query: 142 EDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEFYN 201
E PL RAEWIKF G+ A ++ ++ NYL + + +P V Y
Sbjct: 189 EQHPLGRAEWIKFTGVLLGKYEEAKAEFDVIEANYLEALNLVSNVVLENRPTVMSGVMYK 248
Query: 202 GVW-SFTKEAFKLKYVEDAGGENV-----DSSINKMTYNISNSDDLEQLHAILCTVDVVI 255
+W + +++ + + AGGE V + +++ Y +D
Sbjct: 249 DIWYAPGNDSWGAQLLNAAGGEYVFKAQAGTGSSQLNYE--------------YVLDQAQ 294
Query: 256 DGTYTLEPANYTQSTFLENIDAADK--SCFAFLTNQSLWRFDKRNQNSLALDWFDGAVSQ 313
+ + L +++ LE + +AD+ + F +++ + + + +++F+ +
Sbjct: 295 NADFWLGASDFVS---LEAMKSADERYAGFKAFQKNNVYSYTSKKGETGGIEYFELGYMR 351
Query: 314 PQLVLADLTEALFP--TGNYTITYFRNI 339
P L+L D+ + L P NY++ ++ +
Sbjct: 352 PDLILKDIIKILHPDLLPNYSLYFYSKM 379
>gi|345516436|ref|ZP_08795928.1| hypothetical protein BSEG_00023 [Bacteroides dorei 5_1_36/D4]
gi|229433805|gb|EEO43882.1| hypothetical protein BSEG_00023 [Bacteroides dorei 5_1_36/D4]
Length = 383
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 48/99 (48%), Gaps = 15/99 (15%)
Query: 140 FGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEF 199
+ E PL +AEWIKF+G+ E +AN+ + +K+ Y L + TK +P+V E
Sbjct: 194 YKEMTPLGQAEWIKFVGLLLGKEDKANEQFATIKKRYNELKELTGRVTK--RPVVFSGEL 251
Query: 200 YNGVW------SFTKEAFK-------LKYVEDAGGENVD 225
G W SF + FK LK E +GG +D
Sbjct: 252 RGGNWYAVGGRSFLAQLFKDAGADYFLKDDERSGGVTLD 290
>gi|386821065|ref|ZP_10108281.1| ABC-type Fe3+-hydroxamate transport system, periplasmic component
[Joostella marina DSM 19592]
gi|386426171|gb|EIJ40001.1| ABC-type Fe3+-hydroxamate transport system, periplasmic component
[Joostella marina DSM 19592]
Length = 387
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 93/200 (46%), Gaps = 17/200 (8%)
Query: 142 EDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEFYN 201
E PL +AEWIKF G+F N + A+ ++N++ ++Y +A+ K P V +
Sbjct: 197 EATPLGKAEWIKFFGVFFNKQKAADSIFNSIAKSYNQAKELASKAQK--TPSVLSGSMFK 254
Query: 202 GVW-SFTKEAFKLKYVEDAGGENVDSSINKMTYNI-SNSDDLEQLHAILCTVDVVIDGTY 259
+W + E++ +++DA + I K ++ S S + E + A T D Y
Sbjct: 255 DIWYAPAGESWVAHFLKDANA----NYIWKDSFGSGSLSLNFESVLAKAKTTD------Y 304
Query: 260 TLEPANYTQSTFLENIDAADKSCFAFLTNQSLWRFDKRNQNSLALDWFDGAVSQPQLVLA 319
+ P +T L+ + + F N++++ + + L +++ A ++P LVL
Sbjct: 305 WIGPGQFTSYNQLQESN-IHYTQFDAYKNKNIYTYSLTAGATGGLLYYELAPNRPDLVLK 363
Query: 320 DLTEALFPT--GNYTITYFR 337
D+ L P +Y +F+
Sbjct: 364 DIIHILHPEILSDYNPVFFK 383
>gi|313203275|ref|YP_004041932.1| iron(iii) ABC transporter periplasmic iron-binding protein
[Paludibacter propionicigenes WB4]
gi|312442591|gb|ADQ78947.1| iron(III) ABC transporter periplasmic iron-binding protein
[Paludibacter propionicigenes WB4]
Length = 379
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 51/93 (54%), Gaps = 3/93 (3%)
Query: 138 APFGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWM 197
A + E+ PL RAEWIKF + N A+++++ ++ NYL L + +G T +P V
Sbjct: 184 ASYMEESPLGRAEWIKFEAAYTNEGKLADEIFSKIERNYLELCKKVSGTTN--RPTVFTE 241
Query: 198 EFYNGVWSFT-KEAFKLKYVEDAGGENVDSSIN 229
+ + +W +++ +++DAG + + +N
Sbjct: 242 KKFGDIWYIAGGKSYLGTFMKDAGADYLWKDLN 274
>gi|193216148|ref|YP_001997347.1| periplasmic binding protein [Chloroherpeton thalassium ATCC 35110]
gi|193089625|gb|ACF14900.1| periplasmic binding protein [Chloroherpeton thalassium ATCC 35110]
Length = 416
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 83/197 (42%), Gaps = 25/197 (12%)
Query: 138 APFGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWM 197
A + E+ PL RAEW+K L + E N+ + ++ Y L +A +P V
Sbjct: 218 AAWLENSPLGRAEWVKLLAVLLGKETLVNEKFARIEMQYQRLASLADSVQA--RPTVLPG 275
Query: 198 EFYNGVWSFT-KEAFKLKYVEDAGGENVDSSINKMTYNISNSDDLEQLHAILCTVDVVID 256
Y WS +++ ++++DAG + + K+T ++ D E ++ + T D I
Sbjct: 276 LAYKDSWSIPGGDSYVAQFLKDAGADYYWKN-KKVTGSLKL--DFEAVYPVALTADFWI- 331
Query: 257 GTYTLEPANYTQSTFLENIDAADKSCFAFLTNQSLWRFDKRNQNSLALDWFDG------A 310
N + +E + A D F Q F+ Q L+ F G
Sbjct: 332 --------NPGTAKSIEELLAKDTRFREFAPVQKERVFNNNKQ----LNPFGGNAYWEFG 379
Query: 311 VSQPQLVLADLTEALFP 327
V QPQL+LADL + P
Sbjct: 380 VVQPQLILADLIQIFHP 396
>gi|387130833|ref|YP_006293723.1| Vitamin B12 ABC transporter, B12-binding component BtuF
[Methylophaga sp. JAM7]
gi|386272122|gb|AFJ03036.1| Vitamin B12 ABC transporter, B12-binding component BtuF
[Methylophaga sp. JAM7]
Length = 408
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 39/81 (48%)
Query: 142 EDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEFYN 201
E PL RAEWIK L + N E A ++N E Y L + A + K + ++
Sbjct: 215 ETHPLGRAEWIKLLALMTNRENNAEAIFNQRVERYHALQALVADVSNRPKVMAGYLSSRA 274
Query: 202 GVWSFTKEAFKLKYVEDAGGE 222
+F ++ K + + DAGGE
Sbjct: 275 SFETFAQQNQKAQLIRDAGGE 295
>gi|262407155|ref|ZP_06083704.1| Fe3+ ABC transporter [Bacteroides sp. 2_1_22]
gi|294808169|ref|ZP_06766936.1| periplasmic binding protein [Bacteroides xylanisolvens SD CC 1b]
gi|345512281|ref|ZP_08791815.1| Fe3+ ABC transporter [Bacteroides sp. D1]
gi|229445928|gb|EEO51719.1| Fe3+ ABC transporter [Bacteroides sp. D1]
gi|262355858|gb|EEZ04949.1| Fe3+ ABC transporter [Bacteroides sp. 2_1_22]
gi|294444629|gb|EFG13329.1| periplasmic binding protein [Bacteroides xylanisolvens SD CC 1b]
Length = 379
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 41/199 (20%), Positives = 82/199 (41%), Gaps = 20/199 (10%)
Query: 134 FANFAPFGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPI 193
F + E+ PL +AEW+ L + + + + Y L + A T +
Sbjct: 182 FMYVGDYLEESPLGKAEWMVVLSEVTGKREKGEKAFATIPVRYNALKKKVADSTLDTPSV 241
Query: 194 VAWMEFYNGVWSFTKEAFKLKYVEDAGGENVDSSINKMTYNISNSDDLEQLHAILCTVDV 253
+ + + + + + +++ + + DAGG + K T N S DLE+ + + D+
Sbjct: 242 MLNVPYGDSWFMPSTQSYVARLITDAGGRYI---YQKNTGNASIPIDLEEAYLLASDADM 298
Query: 254 VIDGTYTLEPANYTQSTFLENIDAA-----DKSCFAFLTNQSLWRFDKRNQNSLALDWFD 308
+ N + L+++ A+ D CF N ++ + R + D+++
Sbjct: 299 WL---------NVGMANSLDDLKASCPKFTDTRCF---KNGEVYNNNARTNTAGGNDYYE 346
Query: 309 GAVSQPQLVLADLTEALFP 327
AV P +VL DL + P
Sbjct: 347 SAVVNPDIVLRDLVKIFHP 365
>gi|163788899|ref|ZP_02183344.1| Periplasmic binding protein [Flavobacteriales bacterium ALC-1]
gi|159876136|gb|EDP70195.1| Periplasmic binding protein [Flavobacteriales bacterium ALC-1]
Length = 380
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 90/201 (44%), Gaps = 15/201 (7%)
Query: 142 EDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEFYN 201
E L +AEWIKF G+ N E + ++N ++++YL +A +P + +
Sbjct: 191 ESSALAKAEWIKFFGVLFNKEKEVDSIFNQIEKDYLEAKSIAQQAKN--RPTILSGAMHK 248
Query: 202 GVWSFTK-EAFKLKYVEDAGGENVDSSINKMTYNISNSDDLEQLHAILCTVDVVIDGTYT 260
+W + + ++++DA NV+ ++ T N S + E + D+
Sbjct: 249 DIWYMPNGSSPEAQFLKDA---NVNYLWSETTGNGSLALSFEVVLEKARAADL------W 299
Query: 261 LEPANYTQSTFLENIDAADKSCFAFLTNQSLWRFDKRNQNSLALDWFDGAVSQPQLVLAD 320
L P+ Y LE + + AF N++++ F + + +++ ++P LVL D
Sbjct: 300 LSPSYYGSLDQLEKGNTLYTNFEAF-KNKNIYSFSNTTGATGGVLYYELGTTRPDLVLKD 358
Query: 321 LTEALFPT--GNYTITYFRNI 339
L + P NYT +F+ +
Sbjct: 359 LIKICHPELLENYTPYFFKKL 379
>gi|18311894|ref|NP_558561.1| hypothetical protein PAE0367 [Pyrobaculum aerophilum str. IM2]
gi|18159309|gb|AAL62743.1| conserved hypothetical protein [Pyrobaculum aerophilum str. IM2]
Length = 440
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 62/149 (41%), Gaps = 23/149 (15%)
Query: 140 FGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEF 199
F E PL RAEWIKF+ F N + A ++N ++ + L + A +P VAW
Sbjct: 264 FQEGDPLGRAEWIKFIAAFYNLTSAAVGIFNGIENKWRGLVSLVADLDRPR---VAWFII 320
Query: 200 YNGVWSFTKEAFKLKYVEDAGGENVDSSINKM------------------TYNISNSDDL 241
Y GV + A + + AGG ++ +++ Y + DD+
Sbjct: 321 YGGVL-YPAGAGARELIRLAGGRYAYANYSRVDLEVVLKHKNDVDILVWSGYGVKTIDDI 379
Query: 242 EQLHAILCTVDVVIDG-TYTLEPANYTQS 269
++ L + VI G Y PA Y S
Sbjct: 380 IKIEPRLKELRPVILGRVYAYSPAFYQLS 408
>gi|319644022|ref|ZP_07998581.1| hypothetical protein HMPREF9011_04184 [Bacteroides sp. 3_1_40A]
gi|317384370|gb|EFV65338.1| hypothetical protein HMPREF9011_04184 [Bacteroides sp. 3_1_40A]
Length = 379
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 80/200 (40%), Gaps = 22/200 (11%)
Query: 134 FANFAPFGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPI 193
F + E+ PL +AEW+ L A +V+ + Y L + A P
Sbjct: 182 FMYVGDYLEESPLGKAEWLLALSEIIGKRAEGEKVFAEIPVRYNVLRKKVADNVLD-APS 240
Query: 194 VAWMEFYNGVWSF-TKEAFKLKYVEDAGGENVDSSINKMTYNISNSDDLEQLHAILCTVD 252
V Y W + E++ + V+DAGG+ + K T N S DLE+ + + D
Sbjct: 241 VMLNTPYGDSWFMPSTESYVARMVKDAGGDYI---YKKNTGNASVPIDLEEAYLLASQAD 297
Query: 253 VVIDGTYTLEPANYTQSTFLENIDAA-----DKSCFAFLTNQSLWRFDKRNQNSLALDWF 307
+ + + + L+ + AA D CF ++ + R + D++
Sbjct: 298 MWL---------HVGMANTLDELRAACPKFIDTRCF---RGGQVYNNNARTNAAGGNDYY 345
Query: 308 DGAVSQPQLVLADLTEALFP 327
+ AV P LVL DL + P
Sbjct: 346 ESAVVNPDLVLRDLVKIFHP 365
>gi|158339994|ref|YP_001521164.1| Fe3+ ABC transporter, periplasmic iron-binding protein, putative
[Acaryochloris marina MBIC11017]
gi|158310235|gb|ABW31850.1| Fe3+ ABC transporter, periplasmic iron-binding protein, putative
[Acaryochloris marina MBIC11017]
Length = 420
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 47/83 (56%), Gaps = 3/83 (3%)
Query: 140 FGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEF 199
+ E+ PL +AEW+K+ +F N EA+A QV++ + + Y + ++A + +P V
Sbjct: 227 YMEESPLGQAEWLKYTALFFNQEAQAEQVFSDIAQEYQSMVQLAQSVAQ--RPTVFTGFS 284
Query: 200 YNGVWSFT-KEAFKLKYVEDAGG 221
+NG W +++ + ++DAG
Sbjct: 285 HNGTWYMPGGKSYVSQLLQDAGA 307
>gi|295084988|emb|CBK66511.1| ABC-type Fe3+-hydroxamate transport system, periplasmic component
[Bacteroides xylanisolvens XB1A]
Length = 379
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 41/199 (20%), Positives = 82/199 (41%), Gaps = 20/199 (10%)
Query: 134 FANFAPFGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPI 193
F + E+ PL +AEW+ L + + + + Y L + A T +
Sbjct: 182 FMYVGDYLEESPLGKAEWMVVLSEVTGKREKGEKAFATIPVRYNALKKKVADSTLGTPSV 241
Query: 194 VAWMEFYNGVWSFTKEAFKLKYVEDAGGENVDSSINKMTYNISNSDDLEQLHAILCTVDV 253
+ + + + + + +++ + + DAGG + K T N S DLE+ + + D+
Sbjct: 242 MLNVPYGDSWFMPSTQSYVARLITDAGGRYI---YQKNTGNASIPIDLEEAYLLASDADM 298
Query: 254 VIDGTYTLEPANYTQSTFLENIDAA-----DKSCFAFLTNQSLWRFDKRNQNSLALDWFD 308
+ N + L+++ A+ D CF N ++ + R + D+++
Sbjct: 299 WL---------NVGMANSLDDLKASCPKFTDTRCF---KNGEVYNNNARTNTAGGNDYYE 346
Query: 309 GAVSQPQLVLADLTEALFP 327
AV P +VL DL + P
Sbjct: 347 SAVVNPDIVLRDLVKIFHP 365
>gi|334366736|ref|ZP_08515661.1| ABC transporter, substrate-binding protein [Alistipes sp. HGB5]
gi|336406687|ref|ZP_08587335.1| hypothetical protein HMPREF0127_04648 [Bacteroides sp. 1_1_30]
gi|383122197|ref|ZP_09942894.1| hypothetical protein BSIG_3401 [Bacteroides sp. 1_1_6]
gi|393785638|ref|ZP_10373784.1| hypothetical protein HMPREF1068_00064 [Bacteroides nordii
CL02T12C05]
gi|423217103|ref|ZP_17203599.1| hypothetical protein HMPREF1061_00372 [Bacteroides caccae
CL03T12C61]
gi|423288471|ref|ZP_17267322.1| hypothetical protein HMPREF1069_02365 [Bacteroides ovatus
CL02T12C04]
gi|423300810|ref|ZP_17278834.1| hypothetical protein HMPREF1057_01975 [Bacteroides finegoldii
CL09T03C10]
gi|251839927|gb|EES68010.1| hypothetical protein BSIG_3401 [Bacteroides sp. 1_1_6]
gi|313157240|gb|EFR56670.1| ABC transporter, substrate-binding protein [Alistipes sp. HGB5]
gi|335933233|gb|EGM95237.1| hypothetical protein HMPREF0127_04648 [Bacteroides sp. 1_1_30]
gi|392629633|gb|EIY23640.1| hypothetical protein HMPREF1061_00372 [Bacteroides caccae
CL03T12C61]
gi|392661257|gb|EIY54843.1| hypothetical protein HMPREF1068_00064 [Bacteroides nordii
CL02T12C05]
gi|392669669|gb|EIY63155.1| hypothetical protein HMPREF1069_02365 [Bacteroides ovatus
CL02T12C04]
gi|408472145|gb|EKJ90673.1| hypothetical protein HMPREF1057_01975 [Bacteroides finegoldii
CL09T03C10]
Length = 379
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 80/200 (40%), Gaps = 22/200 (11%)
Query: 134 FANFAPFGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPI 193
F + E+ PL +AEW+ L A +V+ + Y L + A P
Sbjct: 182 FMYVGDYLEESPLGKAEWLVALSEVIGKRAEGEKVFAEIPVRYNVLKKKVADNILD-APS 240
Query: 194 VAWMEFYNGVWSF-TKEAFKLKYVEDAGGENVDSSINKMTYNISNSDDLEQLHAILCTVD 252
V Y W + E++ + ++DAGG+ + K T N S DLE+ + + D
Sbjct: 241 VMLNTPYGDSWFMPSTESYVARLIKDAGGDYI---YKKNTGNASAPIDLEEAYLLASQAD 297
Query: 253 VVIDGTYTLEPANYTQSTFLENIDAA-----DKSCFAFLTNQSLWRFDKRNQNSLALDWF 307
+ + + + L+ + AA D CF ++ + R + D++
Sbjct: 298 MWL---------HVGMANTLDELKAACPKFIDTRCF---RGGQVYNNNARTNAAGGNDYY 345
Query: 308 DGAVSQPQLVLADLTEALFP 327
+ AV P LVL DL + P
Sbjct: 346 ESAVVNPDLVLRDLVKIFHP 365
>gi|410097744|ref|ZP_11292725.1| hypothetical protein HMPREF1076_01903 [Parabacteroides goldsteinii
CL02T12C30]
gi|409223834|gb|EKN16769.1| hypothetical protein HMPREF1076_01903 [Parabacteroides goldsteinii
CL02T12C30]
Length = 386
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
Query: 140 FGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEF 199
+ E PL +AEWIKF+G+ E AN+ + A++ Y L + A +P+V E
Sbjct: 195 YKEMTPLGQAEWIKFVGLLLGIEQEANEKFLAIENRYNELKELTAEGKVQKRPVVFSGEI 254
Query: 200 YNGVW-SFTKEAFKLKYVEDAGGE 222
+ G W + ++F + +DAG +
Sbjct: 255 HGGNWYAVGGKSFLAQLFKDAGAD 278
>gi|423277196|ref|ZP_17256110.1| hypothetical protein HMPREF1203_00327 [Bacteroides fragilis HMW
610]
gi|404587672|gb|EKA92211.1| hypothetical protein HMPREF1203_00327 [Bacteroides fragilis HMW
610]
Length = 382
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 89/208 (42%), Gaps = 27/208 (12%)
Query: 140 FGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEF 199
+ E PL +AEWIKF+G+F E AN+ + A++++Y L A K +P+V E
Sbjct: 193 YKEMTPLGQAEWIKFIGLFIGEEEAANRKFTAIEKHYNELKERVAHVEK--RPVVFSGEI 250
Query: 200 YNGVW-SFTKEAFKLKYVEDAGGENVDSSINKMTYNISNSDDLEQLHAILCTVDV----- 253
G W + ++F + DAG D + + + D E +++ D
Sbjct: 251 RGGNWYAVGGKSFLAQLFRDAGA---DYFLKDDPRSGGVTLDFETVYSQAENADYWRIVN 307
Query: 254 VIDGTYTLEPANYTQSTFLENIDAADKSCFAFLTNQSLWRFDKRNQNSLALDWFDGAVSQ 313
DG ++ + + + F ++ + + R + +++ +Q
Sbjct: 308 SFDGAFSYDALKSEDPRYAD---------FRAFRDKGVIYCNMREK-----PFYESMPTQ 353
Query: 314 PQLVLADLTEALFP--TGNYTITYFRNI 339
P++VL DL +A P +YT Y+ +
Sbjct: 354 PEVVLEDLIKAFHPDLLPDYTPVYYERL 381
>gi|372209568|ref|ZP_09497370.1| ABC transporter substrate-binding protein [Flavobacteriaceae
bacterium S85]
Length = 373
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 44/83 (53%), Gaps = 3/83 (3%)
Query: 138 APFGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWM 197
A + E PL RAEWIKF +F E A+ +++ +++NY + + + T P V +
Sbjct: 180 ASWLEKNPLGRAEWIKFFALFLGKEKEASFIFDEIEKNYTTVLKTVSQTTH--HPKVLYG 237
Query: 198 EFYNGVW-SFTKEAFKLKYVEDA 219
+ + VW + E++ K + DA
Sbjct: 238 DLFQDVWYAPAGESYMAKILRDA 260
>gi|375253827|ref|YP_005012994.1| putative lipoprotein [Tannerella forsythia ATCC 43037]
gi|363407883|gb|AEW21569.1| putative lipoprotein [Tannerella forsythia ATCC 43037]
Length = 391
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 85/194 (43%), Gaps = 25/194 (12%)
Query: 140 FGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEF 199
+ E PL +AEWI+ +G+ E ANQ ++ ++ Y L + A K +P+V E
Sbjct: 202 YKELTPLGQAEWIRLIGLLTGCEEEANQCFDEIERKYNELKALTAHVEK--RPMVFSGEM 259
Query: 200 YNGVW-SFTKEAFKLKYVEDAGGENVDSSINKMTYNISNSDDLEQLH-----AILCTVDV 253
G W + ++F + DAG D + T++ + D E ++ A +
Sbjct: 260 RGGNWYAVGGKSFLAQQFRDAGA---DYFLKDDTHSGGLTLDFEAVYSQAEGAQYWRIVN 316
Query: 254 VIDGTYTLEPANYTQSTFLENIDAADKSCFAFLTNQSLWRFDKRNQNSLALDWFDGAVSQ 313
DG ++ + + + AD + F N+ + + R Q +++ A SQ
Sbjct: 317 SFDGAFSYDALRKEDNRY------ADFNAF---RNKGVIYCNLRKQ-----PFYESAPSQ 362
Query: 314 PQLVLADLTEALFP 327
P+++LADL P
Sbjct: 363 PEVILADLIRVFHP 376
>gi|313146989|ref|ZP_07809182.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
gi|313135756|gb|EFR53116.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
Length = 373
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 89/208 (42%), Gaps = 27/208 (12%)
Query: 140 FGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEF 199
+ E PL +AEWIKF+G+F E AN+ + A++++Y L A K +P+V E
Sbjct: 184 YKEMTPLGQAEWIKFIGLFIGEEETANRKFAAIEKHYNELKERVAHVEK--RPVVFSGEI 241
Query: 200 YNGVW-SFTKEAFKLKYVEDAGGENVDSSINKMTYNISNSDDLEQLHAILCTVDV----- 253
G W + ++F + DAG D + + + D E +++ D
Sbjct: 242 RGGNWYAVGGKSFLAQLFRDAGA---DYFLKDDPRSGGVTLDFETVYSQAENADYWRIVN 298
Query: 254 VIDGTYTLEPANYTQSTFLENIDAADKSCFAFLTNQSLWRFDKRNQNSLALDWFDGAVSQ 313
DG ++ + + + F ++ + + R + +++ +Q
Sbjct: 299 SFDGVFSYDALKSEDPRYAD---------FRAFRDKGVIYCNMREK-----PFYESMPTQ 344
Query: 314 PQLVLADLTEALFP--TGNYTITYFRNI 339
P++VL DL +A P +YT Y+ +
Sbjct: 345 PEVVLEDLIKAFHPDLLPDYTPVYYERL 372
>gi|262381844|ref|ZP_06074982.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
gi|262297021|gb|EEY84951.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
Length = 387
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 48/100 (48%), Gaps = 15/100 (15%)
Query: 140 FGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAA-GKTKPFKPIVAWME 198
+ E PL +AEWIKF+G+ E N+ + A+++ Y L + A GK K PIV E
Sbjct: 196 YKETTPLGQAEWIKFIGLLLGVEKEGNERFAAIEKRYNELKELTADGKVKKC-PIVFSGE 254
Query: 199 FYNGVW------SFTKEAFK-------LKYVEDAGGENVD 225
G W SF + FK LK E +GG +D
Sbjct: 255 LRGGNWYAVGGKSFLAQLFKDAGADYFLKDDERSGGVTLD 294
>gi|424663386|ref|ZP_18100423.1| hypothetical protein HMPREF1205_03772 [Bacteroides fragilis HMW
616]
gi|404577076|gb|EKA81814.1| hypothetical protein HMPREF1205_03772 [Bacteroides fragilis HMW
616]
Length = 382
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 89/208 (42%), Gaps = 27/208 (12%)
Query: 140 FGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEF 199
+ E PL +AEWIKF+G+F E AN+ + A++++Y L A K +P+V E
Sbjct: 193 YKEMTPLGQAEWIKFIGLFIGEEEAANRKFAAIEKHYNELKERVAHVEK--RPVVFSGEI 250
Query: 200 YNGVW-SFTKEAFKLKYVEDAGGENVDSSINKMTYNISNSDDLEQLHAILCTVDV----- 253
G W + ++F + DAG D + + + D E +++ D
Sbjct: 251 RGGNWYAVGGKSFLAQLFRDAGA---DYFLKDDPRSGGVTLDFETVYSQAENADYWRIVN 307
Query: 254 VIDGTYTLEPANYTQSTFLENIDAADKSCFAFLTNQSLWRFDKRNQNSLALDWFDGAVSQ 313
DG ++ + + + F ++ + + R + +++ +Q
Sbjct: 308 SFDGAFSYDALKSEDPRYAD---------FRAFRDKGVIYCNMREK-----PFYESMPTQ 353
Query: 314 PQLVLADLTEALFP--TGNYTITYFRNI 339
P++VL DL +A P +YT Y+ +
Sbjct: 354 PEVVLEDLIKAFHPDLLPDYTPVYYERL 381
>gi|381185963|ref|ZP_09893539.1| vitamin B12 ABC transporter, B12-binding component BtuF
[Flavobacterium frigoris PS1]
gi|379651995|gb|EIA10554.1| vitamin B12 ABC transporter, B12-binding component BtuF
[Flavobacterium frigoris PS1]
Length = 380
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 71/367 (19%), Positives = 152/367 (41%), Gaps = 50/367 (13%)
Query: 3 SDISKVEDAQNFHIYYGQTFKVIK------NAIDGRSYLLIQNNSRMAARTKYCTARIKS 56
S ++++ A+ F IY + V+K A + SY+L Q N+ + + T +
Sbjct: 33 SSKNEIQHAKGFEIYKYDGYSVVKITNPWPAAKESFSYILKQKNAIIPDSLMHFT----T 88
Query: 57 FVIPMSNYSV-DTDFFPG-KLLGLLSSMKGM-TSESVASGCVLKLYQGGEIGLVNKSEPL 113
IP+ V T P ++LG+ +++ G ++ ++S K G++ V K+E L
Sbjct: 89 IQIPIKTIVVTSTTHIPSLEMLGVENTLVGFPNTDYISSEKTRKRIDAGKVREVGKNENL 148
Query: 114 QF-------SQYAAHFTTDSDQPQACNFANFA-------PFGEDGPLRRAEWIKFLGIFA 159
+ F+ +S P + E PL +AEWIKF G
Sbjct: 149 NTEVLIDMQADVIVGFSLNSSNPSLTLLQKSGLKVMLNGDWTEQSPLGKAEWIKFFGALY 208
Query: 160 NAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEFYNGVWSFTK-EAFKLKYVED 218
+++AN +++ +++ Y +A TK KP V + W + E++ +++D
Sbjct: 209 GLDSKANSIFSDIEKEYNTTLALAKKVTK--KPTVLSGAMFQDQWYVPQGESWASLFLKD 266
Query: 219 AGGENVDSSINKMTYNISNSDDLEQLHAILCTVDVVID----GTYTLEPANYTQSTFLEN 274
A + + S D + + +VV++ + + P +++ + +
Sbjct: 267 AQADYLWS-------------DTKGTGGLSLPFEVVLEKAQKAEFWIAPGDFSSLKQMSD 313
Query: 275 IDAADKSCFAFLTNQSLWRFDKRNQNSLALDWFDGAVSQPQLVLADLTEALFPT--GNYT 332
+ + F N+ ++ + + +F+ + ++P VL DL + P N+
Sbjct: 314 SN-PHYAQFDSFKNKKVYSYALNKGAKGGILYFEWSPTRPDWVLKDLIKIFHPELLPNHK 372
Query: 333 ITYFRNI 339
+ +F+ +
Sbjct: 373 LFFFQKL 379
>gi|325282208|ref|YP_004254750.1| periplasmic binding protein [Odoribacter splanchnicus DSM 20712]
gi|324314017|gb|ADY34570.1| periplasmic binding protein [Odoribacter splanchnicus DSM 20712]
Length = 377
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 41/191 (21%), Positives = 79/191 (41%), Gaps = 20/191 (10%)
Query: 142 EDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEFYN 201
E+ PL +AEW+ L A A + + Y L + ++ + + +
Sbjct: 188 EESPLGKAEWLVALAEVAGKRAEGETAFAEIPVRYNALKKRVTDAALDAPSVMLNIPYGD 247
Query: 202 GVWSFTKEAFKLKYVEDAGGENVDSSINKMTYNISNSDDLEQLHAILCTVDVVIDGTYTL 261
+ + +++ ++ + DAGG+ + K T N S DLE+ + + D+ +
Sbjct: 248 SWFMPSTKSYAVRLIADAGGDYI---YKKNTGNASAPIDLEEAYLLASQADIWM------ 298
Query: 262 EPANYTQSTFLENIDAA-----DKSCFAFLTNQSLWRFDKRNQNSLALDWFDGAVSQPQL 316
+ + L+ + AA D CF N ++ + R + D+++ AV P L
Sbjct: 299 ---HVGMANTLDELRAACPKFTDTRCF---RNGYVYNNNARTNAAGGNDYYESAVVNPDL 352
Query: 317 VLADLTEALFP 327
VL DL + P
Sbjct: 353 VLRDLVKIFHP 363
>gi|423304506|ref|ZP_17282505.1| hypothetical protein HMPREF1072_01445 [Bacteroides uniformis
CL03T00C23]
gi|423310381|ref|ZP_17288365.1| hypothetical protein HMPREF1073_03115 [Bacteroides uniformis
CL03T12C37]
gi|392682132|gb|EIY75481.1| hypothetical protein HMPREF1073_03115 [Bacteroides uniformis
CL03T12C37]
gi|392683956|gb|EIY77288.1| hypothetical protein HMPREF1072_01445 [Bacteroides uniformis
CL03T00C23]
Length = 379
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 81/201 (40%), Gaps = 24/201 (11%)
Query: 134 FANFAPFGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLT-RVAAGKTKPFKP 192
F + E+ PL +AEW+ L +V+ + Y L RV P
Sbjct: 182 FMYVGDYLEESPLGKAEWLVALAEVTGKRTEGEKVFADIPVRYNALKKRVTDAAID--AP 239
Query: 193 IVAWMEFYNGVWSF-TKEAFKLKYVEDAGGENVDSSINKMTYNISNSDDLEQLHAILCTV 251
V Y W + E++ + ++DAGG+ + K T N S DLE+ + + V
Sbjct: 240 SVMLNTPYGDNWFMPSTESYVARLIKDAGGDYI---YKKNTGNASAPIDLEEAYLLASQV 296
Query: 252 DVVIDGTYTLEPANYTQSTFLENIDAA-----DKSCFAFLTNQSLWRFDKRNQNSLALDW 306
D+ + + + L+ + AA D CF N ++ + R + D+
Sbjct: 297 DMWL---------HVGMANTLDELRAACPKFTDTRCF---RNGYVYNNNARTNAAGGNDY 344
Query: 307 FDGAVSQPQLVLADLTEALFP 327
++ AV P LVL DL + P
Sbjct: 345 YESAVVNPDLVLRDLVKIFHP 365
>gi|375256742|ref|YP_005015909.1| putative lipoprotein [Tannerella forsythia ATCC 43037]
gi|363408744|gb|AEW22430.1| putative lipoprotein [Tannerella forsythia ATCC 43037]
Length = 379
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Query: 138 APFGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKP-IVAW 196
A + E PL RAEW+KFLG+ ARA+ ++ + NYL + +A T +P ++
Sbjct: 187 ADYMEADPLGRAEWLKFLGLLTGHSARADSLFRETETNYLRIKSLAEDVTH--RPTLLTG 244
Query: 197 MEFYNGVWSFTKEAFKLKYVEDAGGENV 224
M+F + E++ DAG + +
Sbjct: 245 MKFGTPWYVPAGESYMAHIFRDAGADYI 272
>gi|384501134|gb|EIE91625.1| hypothetical protein RO3G_16336 [Rhizopus delemar RA 99-880]
Length = 639
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 73/162 (45%), Gaps = 14/162 (8%)
Query: 124 TDSDQPQACNFANFAPFGEDGPLR----RAEWIKFLGIFANAEARANQVYNAVKENYLCL 179
TD+ A+F F + PL RA W+ ++ F + E A+ +Y+ +K NY C
Sbjct: 452 TDTHSTSNSTTADFV-FSSEMPLAAGHYRASWLLYVAAFFDQEVLASTIYSYIKTNYECH 510
Query: 180 TRVAAGKTKPFKPIVAWMEFY--NGVWSFTKEAFKLKYVEDAGGENV-DSSINKMTYNIS 236
++ K +AW E+ G + ++ + + V DAGG + +S T+ +S
Sbjct: 511 ATNVGQRSD--KKTLAWTEYRPEQGSYVIYRDPYYSQLVSDAGGRLIAPNSAQDTTFTVS 568
Query: 237 NSDDLEQLHAILCTVDVVIDGTYTLEPANYTQSTFLENIDAA 278
+ + L DVV+D + AN T +++ I ++
Sbjct: 569 DQRQAFLFTSALQGADVVLD----ISAANLTFQDWVQPIQSS 606
>gi|333382049|ref|ZP_08473726.1| hypothetical protein HMPREF9455_01892 [Dysgonomonas gadei ATCC
BAA-286]
gi|332829080|gb|EGK01744.1| hypothetical protein HMPREF9455_01892 [Dysgonomonas gadei ATCC
BAA-286]
Length = 376
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Query: 136 NFAPFGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVA 195
+F + E PL +AEWIKF G+ E +A + ++ ++E Y L +A KP+V
Sbjct: 183 SFLGYKESSPLGQAEWIKFTGLLLGMEEQAGKQFDEIEEKYNQLKSLAGPVAH--KPVVL 240
Query: 196 WMEFYNGVW 204
E ++G W
Sbjct: 241 SGELHSGNW 249
>gi|423135525|ref|ZP_17123171.1| hypothetical protein HMPREF9715_02946 [Myroides odoratimimus CIP
101113]
gi|371641534|gb|EHO07117.1| hypothetical protein HMPREF9715_02946 [Myroides odoratimimus CIP
101113]
Length = 381
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 84/206 (40%), Gaps = 24/206 (11%)
Query: 142 EDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFK--PIVAWMEF 199
E PL +AEWIK G E A ++ + ++Y + A K K P V
Sbjct: 191 EQTPLGKAEWIKLFGALYGKEKEAKIFFDKIVQDY----KEAQALVKDAKNNPTVMSGAM 246
Query: 200 YNGVWSFTK-EAFKLKYVEDAGGENVDSSINKMTYNISNSDDLEQLHAIL-CTVDVVIDG 257
Y VW + +++ Y +DA K Y ++ L L +D ID
Sbjct: 247 YQDVWYTPQGQSWMAIYFKDA----------KSDYLWKETEGTGSLSLSLEVVLDKAIDA 296
Query: 258 TYTLEPANYTQSTFLENIDA-ADKSCFAFLTNQSLWRFDKRNQNSLALDWFDGAVSQPQL 316
++ + PA Y T + +DA + F N++++ F R + +++ ++P L
Sbjct: 297 SFWINPAQY--ETLQQLVDANPHYAKFNAFKNKNVYSFSPRKGETGGSLFYELGPTRPDL 354
Query: 317 VLADLTEALFP---TGNYTITYFRNI 339
VL DL L P NY +F +
Sbjct: 355 VLKDLIYILHPEISIPNYQPVFFEQL 380
>gi|198276395|ref|ZP_03208926.1| hypothetical protein BACPLE_02590 [Bacteroides plebeius DSM 17135]
gi|198270837|gb|EDY95107.1| periplasmic binding protein [Bacteroides plebeius DSM 17135]
Length = 379
Score = 46.2 bits (108), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 41/191 (21%), Positives = 79/191 (41%), Gaps = 20/191 (10%)
Query: 142 EDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEFYN 201
E+ PL +AEW+ L A + + A+ Y L + A ++ + + +
Sbjct: 190 EESPLGKAEWMVALSEVAGKRGDGEKTFAAIPVRYNALKKKVADSALDAPSVMLNVPYGD 249
Query: 202 GVWSFTKEAFKLKYVEDAGGENVDSSINKMTYNISNSDDLEQLHAILCTVDVVIDGTYTL 261
+ + +++ + + DAGG V K T N S D+E+ + + D+ +
Sbjct: 250 SWFMPSTQSYAARLIADAGGHYV---YQKNTGNASVPIDMEEAYLLASDADMWL------ 300
Query: 262 EPANYTQSTFLENIDAA-----DKSCFAFLTNQSLWRFDKRNQNSLALDWFDGAVSQPQL 316
N + L+ + A+ D CF N +++ + R D+++ AV P +
Sbjct: 301 ---NVGMANSLDELKASCPKFTDTRCF---KNGNVYNNNARTNAGGGNDYYESAVVNPDI 354
Query: 317 VLADLTEALFP 327
VL DL + P
Sbjct: 355 VLRDLVKIFHP 365
>gi|298375605|ref|ZP_06985562.1| lipoprotein [Bacteroides sp. 3_1_19]
gi|298268105|gb|EFI09761.1| lipoprotein [Bacteroides sp. 3_1_19]
Length = 387
Score = 46.2 bits (108), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 48/100 (48%), Gaps = 15/100 (15%)
Query: 140 FGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAA-GKTKPFKPIVAWME 198
+ E PL +AEWIKF+G+ E N+ + +++ Y L + A GK K +PIV E
Sbjct: 196 YKETTPLGQAEWIKFVGLLLGIEKDGNERFATIEKRYNELKELTADGKVKK-RPIVFSGE 254
Query: 199 FYNGVW------SFTKEAFK-------LKYVEDAGGENVD 225
G W SF + FK LK E +GG +D
Sbjct: 255 LRGGNWYAVGGKSFLAQLFKDAGADYFLKDDEQSGGVTLD 294
>gi|288928066|ref|ZP_06421913.1| putative periplasmic-binding protein of ABC transporter [Prevotella
sp. oral taxon 317 str. F0108]
gi|288330900|gb|EFC69484.1| putative periplasmic-binding protein of ABC transporter [Prevotella
sp. oral taxon 317 str. F0108]
Length = 378
Score = 46.2 bits (108), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
Query: 138 APFGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWM 197
A + E PL RAEW++F G+ E +A+ ++ V++NY+ L+R A K + +P +
Sbjct: 188 ADYMETSPLGRAEWMRFYGLLFGCEQKADSLFALVEKNYMELSRTA--KKERERPTILTE 245
Query: 198 EFYNGVWSFT-KEAFKLKYVEDAGG 221
+ VW + K + DAG
Sbjct: 246 KLTGSVWYVPGGHSTMAKMIADAGA 270
>gi|408369836|ref|ZP_11167616.1| ABC transporter periplasmic-binding protein [Galbibacter sp.
ck-I2-15]
gi|407744890|gb|EKF56457.1| ABC transporter periplasmic-binding protein [Galbibacter sp.
ck-I2-15]
Length = 381
Score = 46.2 bits (108), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Query: 142 EDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEFYN 201
E+ PL +AEWIKF+G F +ANQ++NAV Y ++A T +P V +
Sbjct: 191 EETPLGKAEWIKFMGAFFGKSEQANQIFNAVVTEYNKAKKLALEATS--RPTVISGSMFK 248
Query: 202 GVW-SFTKEAFKLKYVEDA 219
+W + E++ ++ +DA
Sbjct: 249 DIWYAPGGESWLAQFFQDA 267
>gi|410027796|ref|ZP_11277632.1| Fe3+-hydroxamate ABC transporter periplasmic protein, partial
[Marinilabilia sp. AK2]
Length = 360
Score = 46.2 bits (108), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 81/189 (42%), Gaps = 16/189 (8%)
Query: 142 EDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYL-CLTRVAAGKTKPFKPIVAWMEFY 200
E PL RAEWIKF G +AN ++ +K Y+ +V A + KP V Y
Sbjct: 168 EQHPLGRAEWIKFTGALLGDWEKANNIFMEIKSAYVKAAEQVQANRNN--KPTVISGVMY 225
Query: 201 NGVW-SFTKEAFKLKYVEDAGGENV-DSSINKMTYNISNSDDLEQLHAILCTVDVVIDGT 258
+W + +++ + +E AGG+ V + +S LEQ + +
Sbjct: 226 KDIWYAPGADSWGAQLLEAAGGDYVFKGHPGTGSLQLSYEYVLEQAQ----------NAS 275
Query: 259 YTLEPANYTQSTFLENIDAADKSCFAFLTNQSLWRFDKRNQNSLALDWFDGAVSQPQLVL 318
+ A++ + D K AF Q ++ + + + L++F+ +P L+L
Sbjct: 276 IWIGAADHKTLVEMGQTDPRYKFFKAFQDGQ-VYTYTLKKGTTSGLEYFELGYLRPDLIL 334
Query: 319 ADLTEALFP 327
DL + L+P
Sbjct: 335 NDLIKILYP 343
>gi|357061286|ref|ZP_09122045.1| hypothetical protein HMPREF9332_01602 [Alloprevotella rava F0323]
gi|355374795|gb|EHG22087.1| hypothetical protein HMPREF9332_01602 [Alloprevotella rava F0323]
Length = 392
Score = 46.2 bits (108), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 82/201 (40%), Gaps = 15/201 (7%)
Query: 138 APFGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWM 197
A + E PL RAEW++F G+ EA A+ ++ V++NY LT A T +P +
Sbjct: 201 ADYMEATPLGRAEWMRFFGLLFGQEATADSLFQIVEKNYTELTATAQKNTT--RPTLLID 258
Query: 198 EFYNGVWSFTKEAFKLKYVEDAGGENVDSSINKMTYNISNSDDLEQLHAILCTVDVVIDG 257
+ G W L + G + + N + +IS S + A + ++ G
Sbjct: 259 QKQGGAWYVPGGKSYLGSLYKDAGASYCFADNAESGSISLSFETVFQKAHAADLWLIKSG 318
Query: 258 TYTLEPANYTQSTFLENIDAADKSCFAFLTNQSLWRFDKRNQNSLALDWFDGAVSQPQLV 317
P + T + + D A + F +W NS+ + +F+ A +P +
Sbjct: 319 G----PTDLTYAQLQQ--DFAPNAQFKAFREHHIWYC-----NSMKVPYFEEAPFRPDFL 367
Query: 318 LADLTEALFPT--GNYTITYF 336
L D + P +Y YF
Sbjct: 368 LKDFIKIFHPEILPDYQTRYF 388
>gi|423328170|ref|ZP_17305978.1| hypothetical protein HMPREF9711_01552 [Myroides odoratimimus CCUG
3837]
gi|404605320|gb|EKB04922.1| hypothetical protein HMPREF9711_01552 [Myroides odoratimimus CCUG
3837]
Length = 381
Score = 46.2 bits (108), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 84/206 (40%), Gaps = 24/206 (11%)
Query: 142 EDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFK--PIVAWMEF 199
E PL +AEWIK G E A ++ + ++Y + A K K P V
Sbjct: 191 EQTPLGKAEWIKLFGALYGKEKEAKTFFDNIVQDY----KDAQALVKDAKNNPTVMSGAM 246
Query: 200 YNGVWSFTK-EAFKLKYVEDAGGENVDSSINKMTYNISNSDDLEQLHAIL-CTVDVVIDG 257
Y VW + +++ Y +DA K Y ++ L L +D ID
Sbjct: 247 YQDVWYTPQGQSWMAIYFKDA----------KSDYLWKETEGTGSLSLSLEVVLDKAIDA 296
Query: 258 TYTLEPANYTQSTFLENIDA-ADKSCFAFLTNQSLWRFDKRNQNSLALDWFDGAVSQPQL 316
++ + PA Y T + +DA + F N++++ F R + +++ ++P L
Sbjct: 297 SFWINPAQY--ETLQQLVDANPHYAKFNAFKNKNVYSFSPRKGETGGSLFYELGPTRPDL 354
Query: 317 VLADLTEALFP---TGNYTITYFRNI 339
VL DL L P NY +F +
Sbjct: 355 VLKDLIYILHPEISIPNYQPVFFEQL 380
>gi|15895706|ref|NP_349055.1| ferrichrome-binding periplasmic protein [Clostridium acetobutylicum
ATCC 824]
gi|337737657|ref|YP_004637104.1| ferrichrome-binding periplasmic protein [Clostridium acetobutylicum
DSM 1731]
gi|384459167|ref|YP_005671587.1| Ferrichrome-binding periplasmic protein [Clostridium acetobutylicum
EA 2018]
gi|15025458|gb|AAK80395.1|AE007744_5 Ferrichrome-binding periplasmic protein [Clostridium acetobutylicum
ATCC 824]
gi|325509856|gb|ADZ21492.1| Ferrichrome-binding periplasmic protein [Clostridium acetobutylicum
EA 2018]
gi|336291209|gb|AEI32343.1| ferrichrome-binding periplasmic protein [Clostridium acetobutylicum
DSM 1731]
Length = 471
Score = 46.2 bits (108), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 74/157 (47%), Gaps = 24/157 (15%)
Query: 101 GGEIGLVNKSEPLQFSQYAAHFTTDSDQPQACNFANFAPFGEDGPLRRAEWIKFLGIFAN 160
GG GL N + +F + ++T+D++ + E+ PL R EWIKFL F +
Sbjct: 264 GGSYGLNNMMK--KFDELHINYTSDNE------------YLEEDPLGRLEWIKFLSAFYD 309
Query: 161 AEARANQVYN-AVKENYLCLTRVAAGKTKPFKPIVAWMEFYNG-VWSFTKEAFKLKYVED 218
E +A +N V + +V++ K KP VA+ NG V+ K ++ K V+
Sbjct: 310 KEDKAENYFNQQVSKVMATENKVSSLK----KPKVAFGMVDNGKVYIPAKNSYAAKMVDM 365
Query: 219 AGGENVDSSINKMTYNISNSDDLEQLHAILCTVDVVI 255
AGG+ + +N N S LE ++ DV+I
Sbjct: 366 AGGDYIFKDLN----NKSGYITLEDFYSKSKDADVLI 398
>gi|373110101|ref|ZP_09524373.1| hypothetical protein HMPREF9712_01966 [Myroides odoratimimus CCUG
10230]
gi|371643636|gb|EHO09185.1| hypothetical protein HMPREF9712_01966 [Myroides odoratimimus CCUG
10230]
Length = 380
Score = 46.2 bits (108), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 84/206 (40%), Gaps = 24/206 (11%)
Query: 142 EDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFK--PIVAWMEF 199
E PL +AEWIK G E A ++ + ++Y + A K K P V
Sbjct: 190 EQTPLGKAEWIKLFGALYGKEKEAKIFFDKIVQDY----KEAQALVKDAKNNPTVMSGAM 245
Query: 200 YNGVWSFTK-EAFKLKYVEDAGGENVDSSINKMTYNISNSDDLEQLHAIL-CTVDVVIDG 257
Y VW + +++ Y +DA K Y ++ L L +D ID
Sbjct: 246 YQDVWYTPQGQSWMAIYFKDA----------KSDYLWKETEGTGSLSLSLEVVLDKAIDA 295
Query: 258 TYTLEPANYTQSTFLENIDA-ADKSCFAFLTNQSLWRFDKRNQNSLALDWFDGAVSQPQL 316
++ + PA Y T + +DA + F N++++ F R + +++ ++P L
Sbjct: 296 SFWINPAQY--ETLQQLVDANPHYAKFNAFKNKNVYSFSPRKGETGGSLFYELGPTRPDL 353
Query: 317 VLADLTEALFP---TGNYTITYFRNI 339
VL DL L P NY +F +
Sbjct: 354 VLKDLIYILHPEISIPNYQPVFFEQL 379
>gi|300777022|ref|ZP_07086880.1| possible periplasmic binding protein [Chryseobacterium gleum ATCC
35910]
gi|300502532|gb|EFK33672.1| possible periplasmic binding protein [Chryseobacterium gleum ATCC
35910]
Length = 305
Score = 45.8 bits (107), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 86/209 (41%), Gaps = 28/209 (13%)
Query: 140 FGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEF 199
+ E PL + +IK G F E A Y V++NY L ++A+ K K KP+V E
Sbjct: 115 YMEQKPLEKTAYIKIFGEFLGKEKEAEAKYQEVEKNYNDLKQLAS-KAKE-KPVVLANEM 172
Query: 200 YNGVWSFTKEAFKL-KYVEDAGG-----ENVDSSINKMTYNISNSDDLEQLHAILCTVDV 253
Y VW + Y+ DA +N D M++ E+++A V
Sbjct: 173 YGDVWYLPGGNTSVAHYISDANANYIMKDNKDEKALTMSF--------EEVYAKAGNVQY 224
Query: 254 VID-GTYTLEPANYTQSTFLENIDAADKSCFAFLTNQSLWRFDKRNQNSLALDWFDGAVS 312
++ G++T + + F +D +K + + + A D+F+ V
Sbjct: 225 WVNAGSHTSKKEMLGMNPFYGKLDVFNKGKIYTIAGKEKLK---------ANDFFESGVV 275
Query: 313 QPQLVLADLTEALFPT--GNYTITYFRNI 339
+ L+L D + P +Y +TY + +
Sbjct: 276 RADLILKDYIKIFHPEFLPDYQLTYMKEL 304
>gi|325000686|ref|ZP_08121798.1| periplasmic binding protein [Pseudonocardia sp. P1]
Length = 380
Score = 45.8 bits (107), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 63/287 (21%), Positives = 102/287 (35%), Gaps = 36/287 (12%)
Query: 76 LGLLSSMKGMTS----------ESVASGCVLKLYQGGEIG---LVNKSEPLQFSQYAAHF 122
LGLL + G+ S V SG ++ G + +V + P+ S
Sbjct: 110 LGLLDRLTGVGSLAAVSDPQVRAHVESGAAVEFAPGSTVDGERVVADAPPVVLSGGTDDP 169
Query: 123 TTDSDQPQACNFANFAPFGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRV 182
+ + +A + E GPL +AEWIK +G +A+A ++ + + Y L
Sbjct: 170 AFPALRAAGVPVVGWADYLESGPLGQAEWIKVMGALTGTDAQAAAAFDGIAQRYTEL--- 226
Query: 183 AAGKTK--PFKPIVAWMEFYNGVWSFT-KEAFKLKYVEDAGGENVDSSINKMTYNISNSD 239
AG+ + P PIVA + Y G WS ++ DAG I S
Sbjct: 227 -AGRVRGAPPVPIVA-GQPYQGSWSVPGADSTAGMLFRDAGASWSGLGIR------STGT 278
Query: 240 DLEQLHAILCTVDVVIDGTYT--LEPANYTQSTFLENIDAADKSCFAFLTNQSLWRFDKR 297
+ L ++L DG L + + + D + A +W D
Sbjct: 279 SPQTLESVLAA-----DGGAGIWLADGPWATTADIAGTDPRLTAVAAAGPGGQVWTRDAF 333
Query: 298 NQNSLALDWFDGAVSQPQLVLADLTEALFPT--GNYTITYFRNIAKG 342
++ V P +L DL L P + Y+R + G
Sbjct: 334 LGPDGGNQIYERGVLHPDEILGDLVAILHPGLLPGHEFVYYRQVPSG 380
>gi|29347508|ref|NP_811011.1| iron ABC transporter substrate-binding protein [Bacteroides
thetaiotaomicron VPI-5482]
gi|383123676|ref|ZP_09944354.1| hypothetical protein BSIG_3272 [Bacteroides sp. 1_1_6]
gi|29339408|gb|AAO77205.1| Fe3+ ABC transporter, periplasmic iron-binding protein [Bacteroides
thetaiotaomicron VPI-5482]
gi|382983936|gb|EES67881.2| hypothetical protein BSIG_3272 [Bacteroides sp. 1_1_6]
Length = 379
Score = 45.8 bits (107), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 92/216 (42%), Gaps = 17/216 (7%)
Query: 124 TDSDQPQACNFANFAPFGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVA 183
TD + A + + E+ PL +AEW+ L ++ + +V++ + + Y L +
Sbjct: 173 TDKLKELAIPYMYVGEYLEESPLGKAEWLVALSELTDSRDKGIEVFSEIPKRYQALKDLT 232
Query: 184 AGKTKPFKPIVAWMEFYNGVWSF-TKEAFKLKYVEDAGGENVDSSINKMTYNISNSDDLE 242
A + P V + +N W + +++ + V DAG + + + T N S LE
Sbjct: 233 A--SVEHHPTVMFNTPWNDSWVMPSTQSYMAQLVTDAGADYI---YKENTSNSSAPIGLE 287
Query: 243 QLHAILCTVDVVID-GT-YTLEPANYTQSTFLENIDAADKSCFAFLTNQSLWRFDKRNQN 300
+ ++ D I+ GT TL+ F + DK+ + N +L R N
Sbjct: 288 TAYGLIQKADYWINVGTASTLDELKNMNPKFADAKSVRDKTVY----NNNL-RITATGGN 342
Query: 301 SLALDWFDGAVSQPQLVLADLTEALFPTGNYTITYF 336
D+++ AV +P +VL DL P TY+
Sbjct: 343 ----DYWESAVVRPDVVLRDLIHIFHPELVSDSTYY 374
>gi|440750258|ref|ZP_20929502.1| periplasmic-binding protein of ABC transporter [Mariniradius
saccharolyticus AK6]
gi|436481299|gb|ELP37480.1| periplasmic-binding protein of ABC transporter [Mariniradius
saccharolyticus AK6]
Length = 388
Score = 45.8 bits (107), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 82/189 (43%), Gaps = 16/189 (8%)
Query: 142 EDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEFYN 201
E PL RAEWIK G A A+ ++ +++ YL + + +P V Y
Sbjct: 196 EQHPLGRAEWIKVTGALLGKSAEADSIFRVLEKEYLGAIALVK-QQNLMRPRVLAGIMYQ 254
Query: 202 GVWSFT-KEAFKLKYVEDAGGENVDSSINKMTYNISNSDDLEQLHAILCTVDVVIDGTYT 260
VW +++ K +E AG + + S+I + S +L + + D +D
Sbjct: 255 DVWYLPGGDSWAAKLLESAGADYLFSNIEG-----TGSAELSYEYVL----DRAMDADVW 305
Query: 261 LEPANYTQSTFLENIDAADKSCFAFLTNQS--LWRFDKRNQNSLALDWFDGAVSQPQLVL 318
+ A++ LE + AD+ F Q+ ++ + + + L++F+ +P +L
Sbjct: 306 IGVADFPS---LEEMGVADRRYQDFKAFQTGEVYTYALKKGPTGGLEYFELGYLRPDWIL 362
Query: 319 ADLTEALFP 327
DL + L P
Sbjct: 363 KDLIKVLHP 371
>gi|255013814|ref|ZP_05285940.1| putative exported periplasmic protein [Bacteroides sp. 2_1_7]
gi|256839848|ref|ZP_05545357.1| conserved hypothetical protein [Parabacteroides sp. D13]
gi|410101952|ref|ZP_11296880.1| hypothetical protein HMPREF0999_00652 [Parabacteroides sp. D25]
gi|423331847|ref|ZP_17309631.1| hypothetical protein HMPREF1075_01644 [Parabacteroides distasonis
CL03T12C09]
gi|256738778|gb|EEU52103.1| conserved hypothetical protein [Parabacteroides sp. D13]
gi|409229688|gb|EKN22560.1| hypothetical protein HMPREF1075_01644 [Parabacteroides distasonis
CL03T12C09]
gi|409239750|gb|EKN32534.1| hypothetical protein HMPREF0999_00652 [Parabacteroides sp. D25]
Length = 387
Score = 45.8 bits (107), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 48/100 (48%), Gaps = 15/100 (15%)
Query: 140 FGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAA-GKTKPFKPIVAWME 198
+ E PL +AEWIKF+G+ E N+ + +++ Y L + A GK K +PIV E
Sbjct: 196 YKETTPLGQAEWIKFVGLLLGIEKDGNERFATIEKRYNELKELTADGKVKK-RPIVFSGE 254
Query: 199 FYNGVW------SFTKEAFK-------LKYVEDAGGENVD 225
G W SF + FK LK E +GG +D
Sbjct: 255 LRGGNWYAVGGKSFLAQLFKDAGADYFLKDDERSGGVTLD 294
>gi|346318098|gb|EGX87703.1| hypothetical protein CCM_09664 [Cordyceps militaris CM01]
Length = 776
Score = 45.8 bits (107), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 76/365 (20%), Positives = 145/365 (39%), Gaps = 53/365 (14%)
Query: 14 FHIYYGQTFKVIKNAIDGRSYLLIQNNSRMAARTKYCTARIKSFVIPMSNYSVDTDFFPG 73
F+ Y +T+ IKN + ++ + S+ A +P+ N + F
Sbjct: 307 FYPKYNKTYVTIKNR---QRRFVVLHCSKEAPPRSVVGEEALIIQVPVKNVAALDGFSQN 363
Query: 74 --KLLGLLSSMK--GMTSESVASGCVLKLYQGGEIGLV-------NKSEPLQFSQYAAHF 122
++LGL +S++ G+ ++ V S CV +G + + +K+E + + Y
Sbjct: 364 MIEMLGLSTSIRRTGVYAD-VTSSCV----RGNMMDKITYDDDNWDKAEAVDVTFYGDTK 418
Query: 123 TTDSDQPQACNFANFAPFGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLC---- 178
+D+ + N N+AP + G +IKF +F E ++Y+ + +Y C
Sbjct: 419 DSDNKKVLVYNIGNYAPLTQLG------YIKFFSMFFGLEELGTKLYDEIATSYRCAAAN 472
Query: 179 LTRVAAGKTKPFKPIVAWMEFYNGVWSFTKEAFKLKYVEDAGGENVDSSINKMTYNISNS 238
+ P V+ + + + + + DAG V+ S + T N
Sbjct: 473 VQEALLSGAYPKGAYVSPIRKEGDKLTVFQSPWWSTILSDAGSRLVNVSADGETTGQGNP 532
Query: 239 DDLEQLHAILCTVD--------VVIDGT-YTLEPA-----------NYTQSTFLENIDAA 278
+Q+ T D +ID T Y P T T+
Sbjct: 533 TTAQQVSISAITADGAFAKNSWAIIDTTQYDQLPGKQAPKENPKAVRVTADTYATR-SGV 591
Query: 279 DKSCFAFLTNQSLWRFDKRNQNSLALDWFDGAVSQPQLVLADLTEALFPTGN--YTITYF 336
K+ +A + N++++ DK + ++ ++FD ++P LV+ D+ L PT N YT +
Sbjct: 592 SKNIYA-VANKNVYLTDKASNRNMRHNFFDRGSARPDLVIRDMIAMLSPTMNPKYTTQFI 650
Query: 337 RNIAK 341
R + K
Sbjct: 651 RPVTK 655
>gi|150007662|ref|YP_001302405.1| exported periplasmic protein [Parabacteroides distasonis ATCC 8503]
gi|149936086|gb|ABR42783.1| putative exported periplasmic protein [Parabacteroides distasonis
ATCC 8503]
Length = 387
Score = 45.8 bits (107), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 48/100 (48%), Gaps = 15/100 (15%)
Query: 140 FGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAA-GKTKPFKPIVAWME 198
+ E PL +AEWIKF+G+ E N+ + +++ Y L + A GK K +PIV E
Sbjct: 196 YKETTPLGQAEWIKFVGLLLGIEKDGNERFATIEKRYNELKELTADGKVKK-RPIVFSGE 254
Query: 199 FYNGVW------SFTKEAFK-------LKYVEDAGGENVD 225
G W SF + FK LK E +GG +D
Sbjct: 255 LRGGNWYAVGGKSFLAQLFKDAGADYFLKDDERSGGVTLD 294
>gi|86142723|ref|ZP_01061162.1| periplasmic-binding protein of ABC transporter [Leeuwenhoekiella
blandensis MED217]
gi|85830755|gb|EAQ49213.1| periplasmic-binding protein of ABC transporter [Leeuwenhoekiella
blandensis MED217]
Length = 397
Score = 45.8 bits (107), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 77/187 (41%), Gaps = 13/187 (6%)
Query: 142 EDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEFYN 201
E+ PL +AEWIKF + EA A+ ++N ++ Y L A T +P V +
Sbjct: 208 ENSPLGQAEWIKFFAALYDKEAVADSIFNTIETQYNNLKEKALKATN--QPTVLSGAMFK 265
Query: 202 GVWSFTK-EAFKLKYVEDAGGENVDSSINKMTYNISNSDDLEQLHAILCTVDVVIDGTYT 260
VW K +++ + V DA N + N S + +I ++ +
Sbjct: 266 DVWYLPKGDSWAAQLVADANA-------NYLYKNTSGTGSAAL--SIESVLNTAQKADFW 316
Query: 261 LEPANYTQSTFLENIDAADKSCFAFLTNQSLWRFDKRNQNSLALDWFDGAVSQPQLVLAD 320
+ P + L N + A AF N+ ++ F + + +++ A S+P VL D
Sbjct: 317 IAPNAFESYDALANTNDAYTRFDAF-KNKRIYSFASAKGATGGMLYYELAPSRPDWVLED 375
Query: 321 LTEALFP 327
L P
Sbjct: 376 LVAIFHP 382
>gi|167751958|ref|ZP_02424085.1| hypothetical protein ALIPUT_00200 [Alistipes putredinis DSM 17216]
gi|167660199|gb|EDS04329.1| periplasmic binding protein [Alistipes putredinis DSM 17216]
Length = 378
Score = 45.8 bits (107), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 45/210 (21%), Positives = 82/210 (39%), Gaps = 18/210 (8%)
Query: 134 FANFAPFGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPI 193
+A + E PL +AEW+ + A R +V+ + Y L +AA + KP+
Sbjct: 182 YAYMGEYLEQSPLGKAEWLVAVAEIAGMRERGEEVFREIPLRYDSLKTLAAKAER--KPV 239
Query: 194 VAWMEFYNGVWSFT-KEAFKLKYVEDAGGENVDSSINKMTYNISNSDDLEQLHAILCTVD 252
V Y W ++ + + DAGG+ V + T N S D E+ + + D
Sbjct: 240 VMLNTPYGDSWLMAPPSSYVARLIADAGGQYV---YTQDTGNQSRPIDTEEAYRLAEMSD 296
Query: 253 --VVIDGTYTLEPANYTQSTFLENIDAADKSCFAFLTNQSLWRFDKRNQNSLALDWFDGA 310
+ + +L+ F++ + + ++R S D+++
Sbjct: 297 CWINVGSAASLKELAEIVPKFMDTRPVREGRVY---------NNNRRTNPSGGNDYWESG 347
Query: 311 VSQPQLVLADLTEALFPT-GNYTITYFRNI 339
V P L+L DL P + TY+R +
Sbjct: 348 VIHPDLILQDLIRIFHPELTDAEPTYYRKL 377
>gi|327404502|ref|YP_004345340.1| hypothetical protein Fluta_2517 [Fluviicola taffensis DSM 16823]
gi|327320010|gb|AEA44502.1| hypothetical protein Fluta_2517 [Fluviicola taffensis DSM 16823]
Length = 364
Score = 45.4 bits (106), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 76/185 (41%), Gaps = 25/185 (13%)
Query: 29 IDGRSYLLIQNNSRMAARTKYCTARIKSFVIPMSNYSVDTDFFPGKL--LGLLSSMKGMT 86
I+ R Y LI NS+M IK +P+ N + + F G L +G + S+K T
Sbjct: 59 IENR-YALIPRNSKMKR-----PENIKIIEVPVQNMAALSTSFVGMLDAIGGIKSIKATT 112
Query: 87 SESVASGCVL-------KLYQGG-------EIGLVNKSEPLQFSQYAAHFTTDSD--QPQ 130
+ S L K+ G E L K + FS + F + Q
Sbjct: 113 EKQYISNKELVKGINAGKVLTAGYETALTPEAVLKAKIPLIIFSGFGQPFPNEEKFAQLG 172
Query: 131 ACNFANFAPFGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPF 190
AN+ + E PL +AEWIK G + +AN +N V E+YL + A G T+
Sbjct: 173 VVCMANY-DWEEKHPLGKAEWIKVFGALICKDKQANTYFNQVVESYLKIKEEAKGITQKK 231
Query: 191 KPIVA 195
K I
Sbjct: 232 KVIAG 236
>gi|409197462|ref|ZP_11226125.1| periplasmic binding protein [Marinilabilia salmonicolor JCM 21150]
Length = 372
Score = 45.1 bits (105), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
Query: 138 APFGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWM 197
A + E PL R+EW+K + +F EA+A+ ++N + Y L AG +P V
Sbjct: 182 AAYNEMTPLGRSEWLKMMALFVGQEAKADTIFNKIARRYCELKTEMAGVEH--RPTVFSG 239
Query: 198 EFYNGVWSFT-KEAFKLKYVEDAGGENV 224
+ +G W ++F + DAG + V
Sbjct: 240 KMRSGSWYVPGGDSFYARLFRDAGADYV 267
>gi|423220885|ref|ZP_17207379.1| hypothetical protein HMPREF1061_04152 [Bacteroides caccae
CL03T12C61]
gi|392622581|gb|EIY16705.1| hypothetical protein HMPREF1061_04152 [Bacteroides caccae
CL03T12C61]
Length = 377
Score = 45.1 bits (105), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 42/209 (20%), Positives = 89/209 (42%), Gaps = 19/209 (9%)
Query: 123 TTDSDQPQACNFANFAPFGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRV 182
TD + + + + E+ PL +AEW+ L + + +++ + + Y L +
Sbjct: 170 VTDKLKELSIPYLYMGEYLEESPLGKAEWMIVLSELTDKREKGIEIFREIPQRYYALKAL 229
Query: 183 AAGKTKPFKPIVAWMEFYNGVWSF-TKEAFKLKYVEDAGGENVDSSINKMTYNISNSDDL 241
++ +P V + +N W + +++ + + DAG E + + + N S L
Sbjct: 230 TDSVSQ--RPTVMFNTPWNDSWVMPSTQSYMARLIADAGAEYI---YKENSSNSSTPIGL 284
Query: 242 EQLHAILCTVDVVIDGTYTLEPANYTQSTFLENIDAADKSCFA---FLTNQSLWRFDKRN 298
E + ++ D I N +T LE + A + FA + ++++ + R
Sbjct: 285 ETAYGLIQKADYWI---------NVGSATTLEELKAVNPK-FADAKAVNEKTVYNNNLRL 334
Query: 299 QNSLALDWFDGAVSQPQLVLADLTEALFP 327
+ D+++ AV +P +VL DL P
Sbjct: 335 TPTGGNDYWESAVVRPDVVLRDLIHIFHP 363
>gi|145592332|ref|YP_001154334.1| periplasmic binding protein [Pyrobaculum arsenaticum DSM 13514]
gi|145284100|gb|ABP51682.1| periplasmic binding protein [Pyrobaculum arsenaticum DSM 13514]
Length = 442
Score = 45.1 bits (105), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 63/149 (42%), Gaps = 23/149 (15%)
Query: 140 FGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEF 199
F E PL R EW+K + F NA +A V+N V+ + L +AA +P VAW
Sbjct: 266 FNERSPLGRFEWVKAVAAFFNATDKAVAVFNKVEARWDQLASLAADLDRPR---VAWFII 322
Query: 200 YNGVWSFTKEAFKLKYVEDAGGENVDSSINKM------------------TYNISNSDDL 241
Y G+ A + + + AGG ++ +++ Y +S +D+
Sbjct: 323 YQGILYPAGPAVR-ELIRLAGGRYAYANYSRVDLEVVLKHRNDVDVLIWSGYGVSKIEDI 381
Query: 242 EQLHAILCTVDVVIDG-TYTLEPANYTQS 269
++ L + V+ G Y PA Y S
Sbjct: 382 VKIEPRLKELRPVVTGRVYAYSPAFYQLS 410
>gi|153808822|ref|ZP_01961490.1| hypothetical protein BACCAC_03122 [Bacteroides caccae ATCC 43185]
gi|149128648|gb|EDM19866.1| hypothetical protein BACCAC_03122 [Bacteroides caccae ATCC 43185]
Length = 308
Score = 45.1 bits (105), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 42/209 (20%), Positives = 89/209 (42%), Gaps = 19/209 (9%)
Query: 123 TTDSDQPQACNFANFAPFGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRV 182
TD + + + + E+ PL +AEW+ L + + +++ + + Y L +
Sbjct: 101 VTDKLKELSIPYLYMGEYLEESPLGKAEWMIVLSELTDKREKGIEIFREIPQRYYALKAL 160
Query: 183 AAGKTKPFKPIVAWMEFYNGVWSF-TKEAFKLKYVEDAGGENVDSSINKMTYNISNSDDL 241
++ +P V + +N W + +++ + + DAG E + + + N S L
Sbjct: 161 TDSVSQ--RPTVMFNTPWNDSWVMPSTQSYMARLIADAGAEYI---YKENSSNSSTPIGL 215
Query: 242 EQLHAILCTVDVVIDGTYTLEPANYTQSTFLENIDAADKSCFA---FLTNQSLWRFDKRN 298
E + ++ D I N +T LE + A + FA + ++++ + R
Sbjct: 216 ETAYGLIQKADYWI---------NVGSATTLEELKAVNPK-FADAKAVNEKTVYNNNLRL 265
Query: 299 QNSLALDWFDGAVSQPQLVLADLTEALFP 327
+ D+++ AV +P +VL DL P
Sbjct: 266 TPTGGNDYWESAVVRPDVVLRDLIHIFHP 294
>gi|332299223|ref|YP_004441144.1| ABC transporter substrate-binding protein [Porphyromonas
asaccharolytica DSM 20707]
gi|332176286|gb|AEE11976.1| ABC-type transporter, periplasmic subunit [Porphyromonas
asaccharolytica DSM 20707]
Length = 386
Score = 44.7 bits (104), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 80/200 (40%), Gaps = 29/200 (14%)
Query: 136 NFAPFGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVA 195
F + E PL +AEWIKF + E RA +++ ++E Y L + +P V
Sbjct: 192 TFLGYKETSPLGQAEWIKFTALLLGMEERAETLFSTIEERYHELQALITDDL--IRPKVL 249
Query: 196 WMEFYNGVWSFTKEAFKLKYV-EDAGGE--NVDSSINKMTYNISNSDDLEQLHAILCTVD 252
E + G W A L ++ EDAG + D + Y D E ++A D
Sbjct: 250 SGELHGGNWYVVGGASYLAHLFEDAGADYFMADDKESGGFYV-----DFETVYAKAADAD 304
Query: 253 V-----VIDGTYTLEPANYTQSTFLENIDAADKSCFAFLTNQSLWRFDKRNQNSLALDWF 307
DG ++ + L DA + A+ Q L+ N ++
Sbjct: 305 YWRIANSYDGAFSYD--------VLGKTDARYRDFKAYRDKQVLY------CNLRERPFY 350
Query: 308 DGAVSQPQLVLADLTEALFP 327
+ + +P++VLADL A P
Sbjct: 351 ELSPVEPEVVLADLIHAFHP 370
>gi|333979590|ref|YP_004517535.1| ABC transporter substrate-binding protein [Desulfotomaculum
kuznetsovii DSM 6115]
gi|333823071|gb|AEG15734.1| ABC-type transporter, periplasmic subunit [Desulfotomaculum
kuznetsovii DSM 6115]
Length = 374
Score = 44.7 bits (104), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 94/246 (38%), Gaps = 28/246 (11%)
Query: 30 DGRSYLLIQNNSRMAARTKYCTARIKSFVIPMSNYSVDTDFFPGKL--LGLLSSMKGMTS 87
DGR LL+ + A + P+ V + L LG+L ++ G+T+
Sbjct: 59 DGRELLLVPRGKKPPADY----GNLPVIYTPVQKVVVGSTTQAALLRPLGVLGTIAGVTT 114
Query: 88 ESVASGC--VLKLYQGGEIGLVNKSEPLQFSQYAA----------HFTTDSDQPQACN-- 133
E V K + G + + K+ + + A H ++ Q N
Sbjct: 115 EKKDWYIDEVTKGMEKGRVAFLGKNSAPDYEKIKALSPDVVFTYTHVMGGTEFAQKLNEL 174
Query: 134 ---FANFAPFGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPF 190
+A + E PL R EW+KFL F N E A+ + V N + R T
Sbjct: 175 GIPYAVDNEWLESHPLGRVEWVKFLAAFYNKEKEADDYFRQVVANVEQVARKVPAGT--- 231
Query: 191 KPIVAWMEFYNG-VWSFTKEAFKLKYVEDAGGENVDSSINKMTYNISNSDDLEQLHAILC 249
+P V W + G V+ ++ + +E AGG+ V + +N LE+ +A
Sbjct: 232 RPKVLWGSIFKGKVYVPAGNSYVARMIEMAGGDYVFKDLGGSATGNANI-TLEEFYARGK 290
Query: 250 TVDVVI 255
D+ I
Sbjct: 291 DADIFI 296
>gi|298383781|ref|ZP_06993342.1| Fe3+ ABC transporter, periplasmic iron-binding protein [Bacteroides
sp. 1_1_14]
gi|298263385|gb|EFI06248.1| Fe3+ ABC transporter, periplasmic iron-binding protein [Bacteroides
sp. 1_1_14]
Length = 387
Score = 44.7 bits (104), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 91/216 (42%), Gaps = 17/216 (7%)
Query: 124 TDSDQPQACNFANFAPFGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVA 183
TD + A + + E+ PL +AEW+ L ++ + V+ + + Y L +
Sbjct: 181 TDKLKELAIPYMYVGEYLEESPLGKAEWLVALSELTDSRDKGIDVFREIPKRYQALKDLT 240
Query: 184 AGKTKPFKPIVAWMEFYNGVWSF-TKEAFKLKYVEDAGGENVDSSINKMTYNISNSDDLE 242
A + +P V + +N W + +++ + V DAG + + + T N S LE
Sbjct: 241 ASVEQ--RPTVMFNTPWNDSWVMPSTQSYMAQLVTDAGADYI---YKENTSNSSTPIGLE 295
Query: 243 QLHAILCTVDVVID-GT-YTLEPANYTQSTFLENIDAADKSCFAFLTNQSLWRFDKRNQN 300
+ ++ D I+ GT TL+ F + +K+ + N +L R N
Sbjct: 296 TAYGLIQKADYWINVGTASTLDELKNMNPKFADAKSVRNKTVY----NNNL-RITATGGN 350
Query: 301 SLALDWFDGAVSQPQLVLADLTEALFPTGNYTITYF 336
D+++ AV +P +VL DL P TY+
Sbjct: 351 ----DYWESAVVRPDVVLRDLIHIFHPELVSDSTYY 382
>gi|150025519|ref|YP_001296345.1| iron ABC transporter [Flavobacterium psychrophilum JIP02/86]
gi|149772060|emb|CAL43536.1| Probable ABC-type iron(III)-transport system, binding protein
precursor component [Flavobacterium psychrophilum
JIP02/86]
Length = 380
Score = 44.7 bits (104), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 64/286 (22%), Positives = 116/286 (40%), Gaps = 34/286 (11%)
Query: 74 KLLGLLSSMKGM-TSESVASGCVLKLYQGGEIGLVNKSEPLQFSQYA-------AHFTTD 125
++LG+ S+ G ++ V+S KL G + V ++E L Q F D
Sbjct: 108 EMLGVEKSLVGFPHTDYVSSEKTRKLIDAGFVKNVGQNEKLNVEQLIELAPNLIVAFGVD 167
Query: 126 SDQPQACNFANF-------APFGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENY-L 177
+ P N A + E PL +AEWIK G E A +++ + +NY
Sbjct: 168 NTNPMIDNLQKSGLKVLIEADWMEQSPLGKAEWIKLFGALFGKEKEAKTLFDNIVKNYNN 227
Query: 178 CLTRVAAGKTKPFKPIVAWMEFYNGVWSFTK-EAFKLKYVEDAGGENVDSSINKMTYNIS 236
LT VA+ K K V + Y W + ++ ++++DA N + N++
Sbjct: 228 ALTLVASKKA---KSTVLYGSMYQDQWYVARGNSWVAQFMKDAKA-------NYLWANVA 277
Query: 237 NSDDLE-QLHAILCTVDVVIDGTYTLEPANYTQSTFLENIDAADKSCFAFLTNQSLWRFD 295
+ + IL Y + Y L N + S F L +++++ F+
Sbjct: 278 GTGSMSLSFEKILEKAKT---AQYWIPTGAYKNIAALANTN-PHYSQFDALKSKNIYSFE 333
Query: 296 KRNQNSLALDWFDGAVSQPQLVLADLTEALFP--TGNYTITYFRNI 339
+ + +++ + S+P LVL D + P +YT T+ + +
Sbjct: 334 SKLGATGGTIFYELSPSRPDLVLKDYIKIFHPELLPDYTFTFAQKL 379
>gi|423340951|ref|ZP_17318666.1| hypothetical protein HMPREF1077_00096 [Parabacteroides johnsonii
CL02T12C29]
gi|409223413|gb|EKN16349.1| hypothetical protein HMPREF1077_00096 [Parabacteroides johnsonii
CL02T12C29]
Length = 372
Score = 44.3 bits (103), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 63/148 (42%), Gaps = 10/148 (6%)
Query: 77 GLLSSMKGMTSESVASGCVLKLYQGGEIGLVNKSEPLQFSQYAAHFTTDSDQPQACNFAN 136
GL + E+ A L + +G E+ +V+ P Q S Y +
Sbjct: 128 GLKAGRIADMGEATAPNVELMIDKGAELVIVS---PFQNSGYGPV------EKLGIPIIE 178
Query: 137 FAPFGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAW 196
A + E PL R EWI+F G+ EA A+ ++ ++NYL L R+ P +++
Sbjct: 179 GADYMESLPLGRTEWIRFYGMLFGKEALADSIFRNTEKNYLDLKRLITADM-PRPTVISE 237
Query: 197 MEFYNGVWSFTKEAFKLKYVEDAGGENV 224
+F + + E++ DAG + V
Sbjct: 238 KKFGSSWFMPAGESYIANLYADAGADYV 265
>gi|343085896|ref|YP_004775191.1| periplasmic binding protein [Cyclobacterium marinum DSM 745]
gi|342354430|gb|AEL26960.1| periplasmic binding protein [Cyclobacterium marinum DSM 745]
Length = 377
Score = 44.3 bits (103), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 82/216 (37%), Gaps = 39/216 (18%)
Query: 140 FGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEF 199
+ E PL RAEWIK G+ A VYN + NY + + KP V
Sbjct: 183 YQEKHPLGRAEWIKVTGVLLGKLEEAEAVYNKIANNYKIAQEKVSLISSEDKPTVLSGSM 242
Query: 200 YNGVW-SFTKEAFKLKYVEDAGGENVDSSINKMTYNISNSDDLEQLHAILCTVDVVIDGT 258
Y +W + K ++ K + DA G+ + D +E ++ + V+D
Sbjct: 243 YKDIWYAPAKGSWAAKIIGDAAGKYL-------------FDQMEGTGSLTLNYEFVLDQA 289
Query: 259 YTLEPANYTQSTFLENIDAADKSCFAFLTNQSLWRFD-----KRNQNSLALD-------- 305
Q+ F I AAD + + Q+ D K+ + L
Sbjct: 290 --------GQADFW--IGAADNASLGSMVAQNPKYIDFEAYKKKKVYTYTLGKGEKGGYR 339
Query: 306 WFDGAVSQPQLVLADLTEALFPTG--NYTITYFRNI 339
+F+ +P LVL D+ + L P ++ YF+ +
Sbjct: 340 YFEEGYLRPDLVLLDMIKILHPDKAVDHQFRYFQKL 375
>gi|218264978|ref|ZP_03478602.1| hypothetical protein PRABACTJOHN_04312 [Parabacteroides johnsonii
DSM 18315]
gi|218221646|gb|EEC94296.1| hypothetical protein PRABACTJOHN_04312 [Parabacteroides johnsonii
DSM 18315]
Length = 355
Score = 44.3 bits (103), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 108/269 (40%), Gaps = 32/269 (11%)
Query: 77 GLLSSMKGMTSESVASGCVLKLYQGGEIGLVNKSEPLQFSQYAAHFTTDSDQPQACNFAN 136
GL + E+ A L + +G E+ +V+ P Q S Y +
Sbjct: 111 GLKAGRIADMGEATAPNVELMIDKGAELVIVS---PFQNSGYGPV------EKLGIPIIE 161
Query: 137 FAPFGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAW 196
A + E PL R EWI+F G+ EA A+ ++ ++NYL L R+ P +++
Sbjct: 162 GADYMESLPLGRTEWIRFYGMLFGKEALADSIFRNTEKNYLDLKRLITADM-PRPTVISE 220
Query: 197 MEFYNGVWSFTKEAFKLKYVEDAGGENVDSSI-NKMTYNISNSDDLEQ-LHA--ILCTVD 252
+F + + E++ DAG + V + + ++ L+Q +HA L +
Sbjct: 221 KKFGSSWFMPAGESYIANLYADAGADYVFKELPGAGSTPLAFETVLDQAIHADMWLIKYN 280
Query: 253 VVIDGTYTLEPANYTQSTFLENIDAADKSCFAFLTNQSLWRFDKRNQNSLALDWFDGAVS 312
D TY A YT EN DA N+ ++ + N+ + +++
Sbjct: 281 RSEDMTYDDLRAEYTP---YENFDA--------FKNRRIY-----SCNTGLVPYYEEFPL 324
Query: 313 QPQLVLADLTEALFPTG--NYTITYFRNI 339
P +L DL P YT Y+R +
Sbjct: 325 HPDYLLKDLIWVFHPESLPGYTPRYYRKM 353
>gi|423302682|ref|ZP_17280704.1| hypothetical protein HMPREF1057_03845 [Bacteroides finegoldii
CL09T03C10]
gi|408470558|gb|EKJ89092.1| hypothetical protein HMPREF1057_03845 [Bacteroides finegoldii
CL09T03C10]
Length = 378
Score = 44.3 bits (103), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 45/221 (20%), Positives = 93/221 (42%), Gaps = 18/221 (8%)
Query: 123 TTDSDQPQACNFANFAPFGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRV 182
TD + + + + E+ PL +AEW+ L + + +++ + + YL L +
Sbjct: 171 VTDKLKELSIPYLYMGEYLEESPLGKAEWMIVLSELIDNREKGLEIFQEIPQRYLALKAL 230
Query: 183 AAGKTKPFKPIVAWMEFYNGVWSF-TKEAFKLKYVEDAGGENVDSSINKMTYNISNSDDL 241
K +P V + +N W + +++ + V DAG E + + N S L
Sbjct: 231 TDSVEK--RPTVMFNTPWNDSWVMPSTQSYMAQLVADAGAEYIYKENDS---NSSTPIGL 285
Query: 242 EQLHAILCTVD--VVIDGTYTLEPANYTQSTFLENIDAADKSCFAFLTNQSLWRFDKRNQ 299
E + ++ D + + TL+ F + +K+ + N +L R
Sbjct: 286 ETAYGLIQKADYWINVGSAKTLDELKAVNPKFADAKAVHEKAVY----NNNL-RLTPTGG 340
Query: 300 NSLALDWFDGAVSQPQLVLADLTEALFPT-GNYTITYFRNI 339
N D+++ +V +P +VL DL P + ++ Y+R++
Sbjct: 341 N----DYWESSVVRPDVVLRDLIRIFHPELVSDSLYYYRHL 377
>gi|346225059|ref|ZP_08846201.1| iron(III) ABC transporter periplasmic iron-binding protein
[Anaerophaga thermohalophila DSM 12881]
Length = 413
Score = 44.3 bits (103), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 41/88 (46%), Gaps = 3/88 (3%)
Query: 136 NFAPFGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVA 195
N A + E PL RAEW+ F F N E A ++N +K+ Y + + + +P V
Sbjct: 219 NDAGYLEVSPLGRAEWLIFFSAFFNKEDEALAIFNNIKKRYRAVKEIVKETIE--RPSVM 276
Query: 196 WMEFYNGVWSF-TKEAFKLKYVEDAGGE 222
+N VW ++F EDAG +
Sbjct: 277 TGSLFNDVWYMPAGDSFMATLFEDAGAD 304
>gi|294673802|ref|YP_003574418.1| iron compound ABC transporter periplasmic iron compound-binding
protein [Prevotella ruminicola 23]
gi|294471780|gb|ADE81169.1| putative iron compound ABC transporter, periplasmic iron
compound-binding protein [Prevotella ruminicola 23]
Length = 367
Score = 44.3 bits (103), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Query: 140 FGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEF 199
+ E PL +AEWIKF+G+ E +AN+V+ ++ Y L TK +P V E
Sbjct: 178 YKELDPLGQAEWIKFVGMLIGKEQQANEVFAGIESRYNALKEKTQNVTK--RPTVLSGEM 235
Query: 200 YNGVW 204
+ G W
Sbjct: 236 HYGNW 240
>gi|313887284|ref|ZP_07820975.1| ABC transporter, substrate-binding protein [Porphyromonas
asaccharolytica PR426713P-I]
gi|312923203|gb|EFR34021.1| ABC transporter, substrate-binding protein [Porphyromonas
asaccharolytica PR426713P-I]
Length = 393
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 40/88 (45%), Gaps = 3/88 (3%)
Query: 136 NFAPFGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVA 195
F + E PL +AEWIKF + E RA ++ +++ Y L + +P V
Sbjct: 199 TFLGYKETSPLGQAEWIKFTALLLGMEERAETLFTNIEQRYHELQALITDDLT--RPKVL 256
Query: 196 WMEFYNGVWSFTKEAFKLKYV-EDAGGE 222
E + G W A L ++ EDAG E
Sbjct: 257 SGELHGGNWYVVGGASYLAHLFEDAGAE 284
>gi|171185551|ref|YP_001794470.1| periplasmic binding protein [Pyrobaculum neutrophilum V24Sta]
gi|170934763|gb|ACB40024.1| periplasmic binding protein [Pyrobaculum neutrophilum V24Sta]
Length = 428
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 62/146 (42%), Gaps = 23/146 (15%)
Query: 140 FGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEF 199
F E L RAEWIKF+ F NA A ++++ V+ + L + A +P VAW
Sbjct: 252 FQEQTALGRAEWIKFIAAFYNATDDAVKIFDRVEARWSSLASLVADLDRPR---VAWFTI 308
Query: 200 YNGVWSFTKEAFKLKYVEDAGGENVDSSINKM------------------TYNISNSDDL 241
+ GV + A + AGG ++ +++ +Y +S+ DL
Sbjct: 309 FGGVL-YPAGAGVRDLIRTAGGRYAYANYSRVDLEVVLKHKNDVDVLIWSSYGVSSVRDL 367
Query: 242 EQLHAILCTVDVVIDG-TYTLEPANY 266
++ L + V+ G Y PA Y
Sbjct: 368 LKVEPRLAELRPVVLGRVYAYSPAFY 393
>gi|333378155|ref|ZP_08469886.1| hypothetical protein HMPREF9456_01481 [Dysgonomonas mossii DSM
22836]
gi|332883131|gb|EGK03414.1| hypothetical protein HMPREF9456_01481 [Dysgonomonas mossii DSM
22836]
Length = 381
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 46/99 (46%), Gaps = 6/99 (6%)
Query: 140 FGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEF 199
+ E PL RAEWI+F +F E A+ ++ ++NY + + A TK +P V
Sbjct: 191 YTESHPLGRAEWIRFYSLFTGKEHYADSLFAITEKNYKEVKEIVANVTK--RPSVLPDIP 248
Query: 200 YNGVWSFT-KEAFKLKYVEDAGG---ENVDSSINKMTYN 234
Y G W+ +F + DAG N D S + M N
Sbjct: 249 YQGKWNMPGGRSFMSNMLSDAGAIYPWNEDKSTSYMPLN 287
>gi|429738882|ref|ZP_19272662.1| hypothetical protein HMPREF9151_01102 [Prevotella saccharolytica
F0055]
gi|429158578|gb|EKY01118.1| hypothetical protein HMPREF9151_01102 [Prevotella saccharolytica
F0055]
Length = 399
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Query: 138 APFGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVA-AGKTKP 189
A + E PL RAEW+KF G+ + RA+ ++ V+ NYL L + A +T P
Sbjct: 207 ADYMETSPLGRAEWMKFYGLLFGCKERADSLFAVVERNYLSLKKSARRARTSP 259
>gi|399927623|ref|ZP_10784981.1| Fe3+-hydroxamate ABC transporter periplasmic protein [Myroides
injenensis M09-0166]
Length = 380
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 85/368 (23%), Positives = 150/368 (40%), Gaps = 56/368 (15%)
Query: 5 ISKVEDAQNFHIYYGQTFKVIK------NAIDGRSYLLIQNNSRMAARTKYCTARIKSFV 58
++ VE A+ F +Y F ++K N+ Y+L +N S + + TA IK
Sbjct: 35 VNLVEYAKGFSMYDYSDFTIVKITQPWANSTKEYDYVLYKNESTLPDSLRNYTA-IK--- 90
Query: 59 IPMSNYSV-DTDFFPG-KLLGLLSSMKG----------MTSESVASGCVLKLYQGGEIG- 105
+P+ N V T P +LL + S+ G + E +A+ + +L Q +
Sbjct: 91 VPIQNIVVTSTTHLPSIELLDEVKSLIGFPGLDYVSTPVIREQIANKNIKELGQNDNLNT 150
Query: 106 -LVNKSEPLQFSQYAA-------HFTTDSDQPQACNFANFAPFGEDGPLRRAEWIKFLGI 157
L+ P +A H S P N + E PL +AEWIK G
Sbjct: 151 ELILDLHPNVIVAFAMDDKNTPLHTLEKSGIPVVYN----GDWIEQSPLGKAEWIKLFGA 206
Query: 158 FANAEARANQVYNAVKENY-LCLTRVAAGKTKPFKPIVAWMEFYNGVWSFTK-EAFKLKY 215
+ + +A +++N + ++Y LT V K KP I++ + Y VW + E++ Y
Sbjct: 207 LYDKKEKAERLFNQIADDYNEVLTLVENTKDKP--TILSGV-MYQDVWYMPQGESWAAVY 263
Query: 216 VEDAGGENVDSSINKMTYNISNSDDLEQLHAILCTVDVVIDGTYTLEPANYTQSTFLENI 275
DA V I K T S + L + D D + + P +Y L+ +
Sbjct: 264 FRDA----VSDYIWKDT---SGTGSLAL--SFEAVYDKGKDADFWINPGHYES---LKQL 311
Query: 276 DAADK--SCFAFLTNQSLWRFDKRNQNSLALDWFDGAVSQPQLVLADLTEALFPT--GNY 331
A++ + F +++ F + +++ ++P LVL D+ L P NY
Sbjct: 312 KEANEHYANFTAFKKGNVYSFAPTKGETGGTVFYELGPTRPDLVLKDIVSILHPELLPNY 371
Query: 332 TITYFRNI 339
+++ +
Sbjct: 372 ERVFYQQL 379
>gi|325281395|ref|YP_004253937.1| periplasmic binding protein [Odoribacter splanchnicus DSM 20712]
gi|324313204|gb|ADY33757.1| periplasmic binding protein [Odoribacter splanchnicus DSM 20712]
Length = 379
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 79/192 (41%), Gaps = 22/192 (11%)
Query: 142 EDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEFYN 201
E+ PL +AEW+ L A +V+ + Y L + A P V Y
Sbjct: 190 EESPLGKAEWLVALSEVVGRRAEGEKVFVEIPVRYNALKQRVADNALD-APSVMLNTPYG 248
Query: 202 GVWSF-TKEAFKLKYVEDAGGENVDSSINKMTYNISNSDDLEQLHAILCTVDVVIDGTYT 260
W + ++ ++ + DAGG+ + K T N S S D+E+ + + DV +
Sbjct: 249 DSWFMPSTGSYAVRLITDAGGDYI---YKKNTGNASTSIDMEEAYLLASDADVWL----- 300
Query: 261 LEPANYTQSTFLENIDA-----ADKSCFAFLTNQSLWRFDKRNQNSLALDWFDGAVSQPQ 315
N + L+ + A AD C + N ++ + R + D+++ AV P
Sbjct: 301 ----NVGMANTLDELKAACPKFADIRC---VRNGFVYNNNARINAAGGNDYWESAVVNPD 353
Query: 316 LVLADLTEALFP 327
+VL DL + P
Sbjct: 354 IVLRDLIKIFHP 365
>gi|325954693|ref|YP_004238353.1| periplasmic binding protein [Weeksella virosa DSM 16922]
gi|323437311|gb|ADX67775.1| periplasmic binding protein [Weeksella virosa DSM 16922]
Length = 352
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 90/207 (43%), Gaps = 22/207 (10%)
Query: 140 FGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYL-CLTRVAAGKTKPFKPIVAWME 198
+ E P+ R E++K G+ E A + ++ ++ENY T++A K V M
Sbjct: 160 YKETSPIGRVEYLKLFGLLVGKEELAQKRFSEIRENYENTKTKIANAKANKHTTFVNTM- 218
Query: 199 FYNGVWSFT-KEAFKLKYVEDAGGENVDSSINKMTYNISNSDDLEQLHAILCTV-DVVID 256
Y VW KE + K + DA Y +N D+ ++A V
Sbjct: 219 -YGDVWYLPGKETLQAKLLADANA----------NYLWANDGDVLSINASFEQVYKRAKR 267
Query: 257 GTYTLEPANYTQSTFLENIDAADK--SCFAFLTNQSLWRFDKRNQNSLALDWFDGAVSQP 314
T L +++ L+ + AA + F ++++ +++ ++ D+F+ V +P
Sbjct: 268 ATIWLNVSDFQN---LDQMKAARNQYTWFDAYKTKNVYNTNRKANSNGGSDYFETGVVRP 324
Query: 315 QLVLADLTEALFPT--GNYTITYFRNI 339
L+L DL + +P N++ +++ +
Sbjct: 325 DLILQDLGKIYYPELFSNHSFYFYQKL 351
>gi|189460867|ref|ZP_03009652.1| hypothetical protein BACCOP_01514 [Bacteroides coprocola DSM 17136]
gi|189432441|gb|EDV01426.1| periplasmic binding protein [Bacteroides coprocola DSM 17136]
Length = 382
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 87/212 (41%), Gaps = 27/212 (12%)
Query: 138 APFGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWM 197
A + E L RAEW++F G+ EA A+ ++ V+E YL L T KP V
Sbjct: 190 ADYMETSALGRAEWVRFYGLLFGKEAEADSLFAGVEEAYLSLRNQVKDITP--KPTVITE 247
Query: 198 EFYNGVWSFT-KEAFKLKYVEDAGGENVDSSINKMTYNISNSDDLEQLHAILCTVDVVID 256
G W + K DAG + + D+ Q + + V D
Sbjct: 248 LKTGGTWYVPGGNSTMAKLYADAGARYIFA-------------DIPQSGSASLAFETVFD 294
Query: 257 GTYTLEPANYTQSTFLENIDAAD---KSCFAFLTNQSLWRFDKR--NQNSLALDWFDGAV 311
+ A++ + + +D KS +A N +R ++R N+ + +++
Sbjct: 295 KG---QHADFWLIKYNQQVDKTYRELKSDYAPYANFDAFR-NRRVYGCNTSRISFYEEVP 350
Query: 312 SQPQLVLADLTEALFP--TGNYTITYFRNIAK 341
P+L+L DL + P +YT YF N+A+
Sbjct: 351 FHPELLLKDLVKVFHPDILKDYTPRYFTNLAE 382
>gi|119873437|ref|YP_931444.1| periplasmic binding protein [Pyrobaculum islandicum DSM 4184]
gi|119674845|gb|ABL89101.1| periplasmic binding protein [Pyrobaculum islandicum DSM 4184]
Length = 428
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 62/146 (42%), Gaps = 23/146 (15%)
Query: 140 FGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEF 199
F E L RAEWIKF+ F NA A ++++ V+ + L + A +P VAW
Sbjct: 252 FQEQTALGRAEWIKFIAAFYNATDDAVKIFDRVEAKWSSLASLVADLDRPR---VAWFTI 308
Query: 200 YNGVWSFTKEAFKLKYVEDAGGENVDSSINKM------------------TYNISNSDDL 241
+ GV + A + AGG ++ +++ +Y +S+ DL
Sbjct: 309 FGGVL-YPAGAGVRDLIRIAGGRYAYANYSRVDLEVVMKHKNDVDVLIWSSYGVSSVKDL 367
Query: 242 EQLHAILCTVDVVIDG-TYTLEPANY 266
++ L + V+ G Y PA Y
Sbjct: 368 LKVEPRLAELRPVVLGRVYAYSPAFY 393
>gi|260911622|ref|ZP_05918204.1| conserved hypothetical protein [Prevotella sp. oral taxon 472 str.
F0295]
gi|260634258|gb|EEX52366.1| conserved hypothetical protein [Prevotella sp. oral taxon 472 str.
F0295]
Length = 375
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Query: 138 APFGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWM 197
A + E PL RAEW+KF G+ +E A+ ++ V++NY+ LT A K + P +
Sbjct: 185 ADYMETSPLGRAEWMKFYGLLFGSEQTADSLFMEVEKNYMELTE--AAKKEHEGPTILTE 242
Query: 198 EFYNGVW 204
+ VW
Sbjct: 243 KLTGTVW 249
>gi|228469341|ref|ZP_04054359.1| Periplasmic binding protein [Porphyromonas uenonis 60-3]
gi|228309138|gb|EEK17758.1| Periplasmic binding protein [Porphyromonas uenonis 60-3]
Length = 380
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 80/200 (40%), Gaps = 29/200 (14%)
Query: 136 NFAPFGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVA 195
F + E PL +AEW+KF + E RA +++ +++ Y L + +P V
Sbjct: 186 TFLGYKETSPLGQAEWLKFTALLLGMEERAETIFSTIEQRYHELQALITDDLP--RPKVL 243
Query: 196 WMEFYNGVWSFTKEAFKLKYV-EDAGGE--NVDSSINKMTYNISNSDDLEQLHAILCTVD 252
E + G W A L ++ EDAG + D + Y D E ++A D
Sbjct: 244 SGELHGGNWYVVGGASYLAHLFEDAGADYFMADDKESGGFYV-----DFETVYAKAADAD 298
Query: 253 V-----VIDGTYTLEPANYTQSTFLENIDAADKSCFAFLTNQSLWRFDKRNQNSLALDWF 307
DG ++ + L DA + A+ Q L+ N ++
Sbjct: 299 YWRIANSYDGAFSYD--------VLGKTDARYRDFKAYRDKQVLY------CNLRERPFY 344
Query: 308 DGAVSQPQLVLADLTEALFP 327
+ + +P++VLADL A P
Sbjct: 345 ELSPVEPEVVLADLIHAFHP 364
>gi|333030325|ref|ZP_08458386.1| periplasmic binding protein [Bacteroides coprosuis DSM 18011]
gi|332740922|gb|EGJ71404.1| periplasmic binding protein [Bacteroides coprosuis DSM 18011]
Length = 379
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 3/88 (3%)
Query: 136 NFAPFGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVA 195
+F + E PL +AEWIKF E AN + A+++ YL L + K +P V
Sbjct: 185 SFLGYKEVTPLGQAEWIKFTAALLGLEDEANVKFKAIEDRYLELKALVENVEK--RPTVL 242
Query: 196 WMEFYNGVWSFT-KEAFKLKYVEDAGGE 222
E ++G W E++ + DAG +
Sbjct: 243 SGELHSGNWYVVGGESYLAQLFRDAGAQ 270
>gi|193215933|ref|YP_001997132.1| iron(III) ABC transporter periplasmic iron-binding protein
[Chloroherpeton thalassium ATCC 35110]
gi|193089410|gb|ACF14685.1| iron(III) ABC transporter, periplasmic iron-binding protein
[Chloroherpeton thalassium ATCC 35110]
Length = 417
Score = 43.1 bits (100), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 82/355 (23%), Positives = 137/355 (38%), Gaps = 55/355 (15%)
Query: 5 ISKVEDAQNFHIYYGQTFKVIK------NAIDGRSYLLIQNNSRMAARTKYCTARIKSFV 58
+S+++ A+ F I+Y K+I+ + D Y+L N + + + T
Sbjct: 66 LSEIKYAKGFDIHYENGVKLIRIFKGFQDKADTLRYVLAPKNFTVPEQYRSWTV----VR 121
Query: 59 IPMSNYSVDTDFFPG--KLLGLLSSMKGM-TSESVASGCVLKLYQGGEIG---------- 105
P+ ++ T G LLG ++ GM T E + S + GEI
Sbjct: 122 TPIERAAIFTTTHAGFFSLLGAEENIVGMATPEFINSPKIKSRIDAGEISEIGDAFSPNL 181
Query: 106 -----------LVNKSEPLQFSQYAAHFTTDSDQPQACNFANFAPFGEDGPLRRAEWIKF 154
LV +FSQY +S P + E+ PL RAEW+K
Sbjct: 182 EVMLACQLDVVLVTVLPTTKFSQYQT--LIESGSPVVV----IGEWLENSPLGRAEWMKL 235
Query: 155 LGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEFYNGVWSF-TKEAFKL 213
L + E+ AN+ + ++ Y ++ + +P V Y W E++
Sbjct: 236 LAALLDKESLANEEFAQIESAYQSFAKLT--DSVSVRPSVLTGLAYKDSWFVPAGESYGA 293
Query: 214 KYVEDAGGENVDSSINKMTYNISNSDDLEQLHAILCTVDVVID-GTYTLEPANYTQSTFL 272
++DAG SS K T +++ D E ++ + D I+ GT T + + +
Sbjct: 294 CLLKDAGASYHWSS-KKGTGSLNL--DFEAVYPVALAADFWINPGTLTSMKELFAKDSRF 350
Query: 273 ENIDAADKSCFAFLTNQSLWRFDKRNQNSLALDWFDGAVSQPQLVLADLTEALFP 327
++ + +S F N+ L N N W G V +P LVL DL P
Sbjct: 351 KDFSSV-RSGRVFNNNKQL------NANGGNAYWEYGIV-KPHLVLGDLISIFHP 397
>gi|282859541|ref|ZP_06268646.1| conserved hypothetical protein [Prevotella bivia JCVIHMP010]
gi|282587769|gb|EFB92969.1| conserved hypothetical protein [Prevotella bivia JCVIHMP010]
Length = 383
Score = 43.1 bits (100), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 26/46 (56%)
Query: 138 APFGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVA 183
A + E L RAEW+KF GI E A+ ++N VK NY L +A
Sbjct: 196 AEYMETSALGRAEWMKFYGILVGKEKEADSLFNVVKTNYWKLHNLA 241
>gi|260642239|ref|ZP_05415036.2| Fe3+ ABC transporter, periplasmic iron-binding protein [Bacteroides
finegoldii DSM 17565]
gi|260623005|gb|EEX45876.1| hypothetical protein BACFIN_06382 [Bacteroides finegoldii DSM
17565]
Length = 390
Score = 43.1 bits (100), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 90/207 (43%), Gaps = 17/207 (8%)
Query: 124 TDSDQPQACNFANFAPFGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVA 183
TD + + + + E+ PL +AEW+ L ++ + ++++ + + YL L +
Sbjct: 184 TDKLKELSIPYIYMGEYLEESPLGKAEWMVVLSELTDSREKGIEIFSEIPKRYLSLKALT 243
Query: 184 AGKTKPFKPIVAWMEFYNGVWSF-TKEAFKLKYVEDAGGENVDSSINKMTYNISNSDDLE 242
+ P V + +N W + +++ + V DAG E + + + N S S LE
Sbjct: 244 ESVGQ--CPTVMFNTPWNDSWVMPSTKSYMAQLVADAGAEYI---YKENSSNSSTSIGLE 298
Query: 243 QLHAILCTVDVVID-GTYT-LEPANYTQSTFLENIDAADKSCFAFLTNQSLWRFDKRNQN 300
+ ++ D I+ G+ T L+ F + +++ + N +L R N
Sbjct: 299 TAYGLIQKADYWINVGSATSLDELKTVNPKFADAKAVRERTVY----NNNL-RLTPTGGN 353
Query: 301 SLALDWFDGAVSQPQLVLADLTEALFP 327
D+++ AV +P +VL DL P
Sbjct: 354 ----DYWESAVIRPDVVLRDLIHIFHP 376
>gi|424900970|ref|ZP_18324512.1| ABC-type Fe3+-hydroxamate transport system, periplasmic component
[Prevotella bivia DSM 20514]
gi|388593170|gb|EIM33409.1| ABC-type Fe3+-hydroxamate transport system, periplasmic component
[Prevotella bivia DSM 20514]
Length = 376
Score = 43.1 bits (100), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 26/46 (56%)
Query: 138 APFGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVA 183
A + E L RAEW+KF GI E A+ ++N VK NY L +A
Sbjct: 189 AEYMETSALGRAEWMKFYGILVGKEKEADSLFNVVKTNYWKLHNLA 234
>gi|62320192|dbj|BAD94414.1| hypothetical protein [Arabidopsis thaliana]
Length = 28
Score = 43.1 bits (100), Expect = 0.24, Method: Composition-based stats.
Identities = 16/27 (59%), Positives = 20/27 (74%)
Query: 342 GEGVVNIDAKMCDRDTSIPMEPTILPC 368
GEGV+NI MCDRD S+P+ P+I C
Sbjct: 1 GEGVINISPDMCDRDASLPLVPSIPAC 27
>gi|423289969|ref|ZP_17268819.1| hypothetical protein HMPREF1069_03862 [Bacteroides ovatus
CL02T12C04]
gi|392666711|gb|EIY60224.1| hypothetical protein HMPREF1069_03862 [Bacteroides ovatus
CL02T12C04]
Length = 377
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 42/204 (20%), Positives = 89/204 (43%), Gaps = 18/204 (8%)
Query: 140 FGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEF 199
+ E+ PL +AEW+ L ++ + +++ + + Y L + + +P V
Sbjct: 187 YLEESPLGKAEWLVALAELTDSREKGIEIFREIPKRYQVLKALTESVEQ--RPTVMLNTP 244
Query: 200 YNGVWSF-TKEAFKLKYVEDAGGENVDSSINKMTYNISNSDDLEQLHAILCTVD--VVID 256
+N W + +++ + V DAG + + K T N S LE + ++ D + +
Sbjct: 245 WNDSWVMPSTQSYMAQLVTDAGADYI---YKKNTSNSSTPIGLETAYKLIQKADYWINVG 301
Query: 257 GTYTLEPANYTQSTFLENIDAADKSCFAFLTNQSLWRFDKRNQNSLALDWFDGAVSQPQL 316
TL+ F++ +K+ + N +L R + D+++ AV +P +
Sbjct: 302 MASTLDELKTVNPKFVDAKAVREKTVY----NNNL-----RTTPTGGNDYWESAVVRPDV 352
Query: 317 VLADLTEALFPT-GNYTITYFRNI 339
VL DL P + ++ Y+R++
Sbjct: 353 VLRDLIHIFHPELVSDSLYYYRHL 376
>gi|198276820|ref|ZP_03209351.1| hypothetical protein BACPLE_03023 [Bacteroides plebeius DSM 17135]
gi|198270345|gb|EDY94615.1| periplasmic binding protein [Bacteroides plebeius DSM 17135]
Length = 378
Score = 42.7 bits (99), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Query: 138 APFGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWM 197
A + E PL RAEW++F G+ E R + ++ +++ YL + +AA T +P V
Sbjct: 186 ADYMETSPLGRAEWLRFYGLLVGQEQRGDSLFAHIEKEYLTVKNLAAQVTS--RPTVLSD 243
Query: 198 EFYNGVW 204
Y W
Sbjct: 244 LKYGSAW 250
>gi|399025406|ref|ZP_10727410.1| ABC-type Fe3+-hydroxamate transport system, periplasmic component,
partial [Chryseobacterium sp. CF314]
gi|398078266|gb|EJL69187.1| ABC-type Fe3+-hydroxamate transport system, periplasmic component,
partial [Chryseobacterium sp. CF314]
Length = 274
Score = 42.7 bits (99), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 82/210 (39%), Gaps = 30/210 (14%)
Query: 140 FGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAA-GKTKPFKPIVAWME 198
F E PL + ++K G + A YN +K+NY L ++A KT KP+V E
Sbjct: 84 FMEQKPLEKTAYLKLFGKLFGKDKEAETKYNKIKKNYNELKQMALNAKT---KPVVLANE 140
Query: 199 FYNGVWSFTKEAFKL-KYVEDAGGE-----NVDSSINKMTYNISNSDDLEQLHAILCTVD 252
Y VW + Y+ DA E N D M++ E+++A V
Sbjct: 141 MYGDVWYMPGGKTSVANYISDANAEYILKNNTDEKALPMSF--------EEVYAKSGNVQ 192
Query: 253 VVID-GTYTLEPANYTQSTFLENIDAADKSCFAFLTNQSLWRFDKRNQNSLALDWFDGAV 311
I+ G + + + F ++ +K +T + + A D+F+
Sbjct: 193 YWINAGNHASKKEMLGMNPFYGKLEVFNKGKIYVITGKERLK---------ANDFFESGA 243
Query: 312 SQPQLVLADLTEALFPT--GNYTITYFRNI 339
+ L+L D + P +Y TY + +
Sbjct: 244 VRSDLILKDYIKIFHPELLPDYQFTYIKEL 273
>gi|333379750|ref|ZP_08471469.1| hypothetical protein HMPREF9456_03064 [Dysgonomonas mossii DSM
22836]
gi|332884896|gb|EGK05151.1| hypothetical protein HMPREF9456_03064 [Dysgonomonas mossii DSM
22836]
Length = 376
Score = 42.7 bits (99), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 44/206 (21%), Positives = 89/206 (43%), Gaps = 39/206 (18%)
Query: 136 NFAPFGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVA 195
+F + E PL +AEWIKF + E +AN+ ++ ++ Y L + +K +P V
Sbjct: 183 SFLGYKESSPLGQAEWIKFTAMLLGIEEQANKQFDDIENKYNKLKALCTSVSK--RPTVL 240
Query: 196 WMEFYNGVW------SFTKEAFK-------LKYVEDAGGENVDSSINKMTYNISNSDDLE 242
E ++G W S+ + F+ +K ++GG VD + +N+D
Sbjct: 241 SGELHSGNWYVVGGNSYLAQLFRDAGADYFMKNDNESGGFYVD--FETVYSQGANTDYWR 298
Query: 243 QLHAILCTVDVVIDGTYTLEPANYTQSTFLENIDAADKSCFAFLTNQSLWRFDKRNQNSL 302
+++ DGT+T + + + + + F ++ L + R +
Sbjct: 299 MVNS--------HDGTFTYDALKQSDARYAD---------FKAFKDKKLIYCNLREK--- 338
Query: 303 ALDWFDGAVSQPQLVLADLTEALFPT 328
+++ +P++VLADL + P+
Sbjct: 339 --PFYENTPVEPEVVLADLIKIFHPS 362
>gi|395206302|ref|ZP_10396868.1| periplasmic binding protein [Propionibacterium humerusii P08]
gi|328905894|gb|EGG25670.1| periplasmic binding protein [Propionibacterium humerusii P08]
Length = 346
Score = 42.4 bits (98), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 4/100 (4%)
Query: 142 EDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEFYN 201
E PL RAEW+K G+ N E + +N + + Y +T+ A KP V +
Sbjct: 227 EPTPLARAEWMKTYGVLLNMEGATRKDFNRIVKRYDEVTKKARHVIN--KPSVLVGQETK 284
Query: 202 GVWSFT-KEAFKLKYVEDAGGENV-DSSINKMTYNISNSD 239
G W +++ K++ DAG NV D ++ M ++S+
Sbjct: 285 GQWYVPGADSYMTKFMTDAGASNVMDQAVKGMGSAPTDSE 324
>gi|379005713|ref|YP_005261385.1| Fe3+-hydroxamate ABC transporter periplasmic protein [Pyrobaculum
oguniense TE7]
gi|375161166|gb|AFA40778.1| ABC-type Fe3+-hydroxamate transport system, periplasmic component
[Pyrobaculum oguniense TE7]
Length = 442
Score = 42.4 bits (98), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 63/149 (42%), Gaps = 23/149 (15%)
Query: 140 FGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEF 199
F E PL R E IK L F NA +A ++N V+ + ++AA T +P VAW
Sbjct: 266 FNEKSPLGRFELIKALAAFFNATDKAVAIFNEVEAKW---DQLAALATDLDRPRVAWFII 322
Query: 200 YNGVWSFTKEAFKLKYVEDAGGENVDSSINKM------------------TYNISNSDDL 241
Y G+ A + + + AGG ++ +++ Y +S +D+
Sbjct: 323 YQGILYPAGPAVR-ELIRLAGGRYAYANYSRVDLEVVLKHRNDVDVIIWSGYGVSKIEDI 381
Query: 242 EQLHAILCTVDVVIDG-TYTLEPANYTQS 269
++ L + V+ G Y PA Y S
Sbjct: 382 AKIEPRLKELKPVVAGRVYAYSPAFYQLS 410
>gi|262406976|ref|ZP_06083525.1| Fe3+ ABC transporter [Bacteroides sp. 2_1_22]
gi|294644166|ref|ZP_06721940.1| periplasmic binding protein [Bacteroides ovatus SD CC 2a]
gi|294805729|ref|ZP_06764608.1| periplasmic binding protein [Bacteroides xylanisolvens SD CC 1b]
gi|345507663|ref|ZP_08787310.1| Fe3+ ABC transporter [Bacteroides sp. D1]
gi|262355679|gb|EEZ04770.1| Fe3+ ABC transporter [Bacteroides sp. 2_1_22]
gi|292640456|gb|EFF58700.1| periplasmic binding protein [Bacteroides ovatus SD CC 2a]
gi|294447052|gb|EFG15640.1| periplasmic binding protein [Bacteroides xylanisolvens SD CC 1b]
gi|345455375|gb|EEO50862.2| Fe3+ ABC transporter [Bacteroides sp. D1]
Length = 377
Score = 42.4 bits (98), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 43/208 (20%), Positives = 84/208 (40%), Gaps = 17/208 (8%)
Query: 123 TTDSDQPQACNFANFAPFGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRV 182
TD + A + + E+ PL +AEW+ L + + +V+ + + Y L +
Sbjct: 170 VTDKLKELAIPYIYMGEYLEESPLGKAEWMVVLSELIDNREKGIEVFREIPKRYHALKAL 229
Query: 183 AAGKTKPFKPIVAWMEFYNGVWSF-TKEAFKLKYVEDAGGENVDSSINKMTYNISNSDDL 241
++ P V + +N W + +++ + + DAG + + N N S L
Sbjct: 230 TDSISQ--HPTVMFNTPWNDSWVMPSTQSYMAQLIADAGADYIYKENNS---NSSTPIGL 284
Query: 242 EQLHAILCTVD--VVIDGTYTLEPANYTQSTFLENIDAADKSCFAFLTNQSLWRFDKRNQ 299
E + ++ D + + TL+ F + +K+ + N +L R
Sbjct: 285 ETAYGLIQKADYWINVGSVTTLDELKAVNPKFADAKAVREKTVY----NNNL-RLTSTGG 339
Query: 300 NSLALDWFDGAVSQPQLVLADLTEALFP 327
N D+++ AV +P +VL DL P
Sbjct: 340 N----DYWESAVVRPDVVLRDLIHIFHP 363
>gi|298479759|ref|ZP_06997959.1| Fe3+ ABC transporter, periplasmic iron-binding protein [Bacteroides
sp. D22]
gi|336403119|ref|ZP_08583839.1| hypothetical protein HMPREF0127_01152 [Bacteroides sp. 1_1_30]
gi|298274149|gb|EFI15710.1| Fe3+ ABC transporter, periplasmic iron-binding protein [Bacteroides
sp. D22]
gi|335946857|gb|EGN08653.1| hypothetical protein HMPREF0127_01152 [Bacteroides sp. 1_1_30]
Length = 377
Score = 42.4 bits (98), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 43/208 (20%), Positives = 84/208 (40%), Gaps = 17/208 (8%)
Query: 123 TTDSDQPQACNFANFAPFGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRV 182
TD + A + + E+ PL +AEW+ L + + +V+ + + Y L +
Sbjct: 170 VTDKLKELAIPYIYMGEYLEESPLGKAEWMVVLSELIDNRKKGIEVFREIPKRYHALKAL 229
Query: 183 AAGKTKPFKPIVAWMEFYNGVWSF-TKEAFKLKYVEDAGGENVDSSINKMTYNISNSDDL 241
++ P V + +N W + +++ + + DAG + + N N S L
Sbjct: 230 TDSISQ--HPTVMFNTPWNDSWVMPSTQSYMAQLIADAGADYIYKENNS---NSSTPIGL 284
Query: 242 EQLHAILCTVD--VVIDGTYTLEPANYTQSTFLENIDAADKSCFAFLTNQSLWRFDKRNQ 299
E + ++ D + + TL+ F + +K+ + N +L R
Sbjct: 285 ETAYGLIQKADYWINVGSVTTLDELKAVNPKFADAKAVREKTVY----NNNL-RLTSTGG 339
Query: 300 NSLALDWFDGAVSQPQLVLADLTEALFP 327
N D+++ AV +P +VL DL P
Sbjct: 340 N----DYWESAVVRPDVVLRDLIHIFHP 363
>gi|395802046|ref|ZP_10481300.1| periplasmic binding protein [Flavobacterium sp. F52]
gi|395435777|gb|EJG01717.1| periplasmic binding protein [Flavobacterium sp. F52]
Length = 380
Score = 42.4 bits (98), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 85/193 (44%), Gaps = 25/193 (12%)
Query: 142 EDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEFYN 201
E PL +AEWIK G E +A ++++ + E+Y ++ KP V + Y
Sbjct: 191 EQSPLGKAEWIKLYGALFGKEDKAKELFDKIVESYNQAKKLVV--DKPATSKVLYGSMYE 248
Query: 202 GVWSFTK-EAFKLKYVEDAGGENVDSSINKMTYNISNSDDLEQLHAILCTVDVVIDGTYT 260
VW K ++ ++++DA K Y + DLE + + + V+D T
Sbjct: 249 DVWYVAKGNSWVAQFMKDA----------KSNYLWA---DLEGTGSEGLSFEKVLDKAKT 295
Query: 261 LEPAN-YTQSTFLENIDAADKSC-----FAFLTNQSLWRFDKRNQNSLALDWFDGAVSQP 314
AN + S +++D K+ F N++++ F+ + + +++ A S+P
Sbjct: 296 ---ANVWIASGSFKSLDELQKANPHYAEFDAFKNKTIYNFEGKLGATGGTVYYELAPSRP 352
Query: 315 QLVLADLTEALFP 327
LVL D + P
Sbjct: 353 DLVLKDYIKIFHP 365
>gi|126460126|ref|YP_001056404.1| periplasmic binding protein [Pyrobaculum calidifontis JCM 11548]
gi|126249847|gb|ABO08938.1| periplasmic binding protein [Pyrobaculum calidifontis JCM 11548]
Length = 435
Score = 42.0 bits (97), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Query: 140 FGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEF 199
F E PL RAEWIKF+ F N A ++++ + + L +A + +P VAW
Sbjct: 259 FQEGSPLGRAEWIKFIAAFYNLTDAAVKIFDGAEAKWNSLAALA--REAEHRPRVAWFII 316
Query: 200 YNGV 203
+ GV
Sbjct: 317 FGGV 320
>gi|380696770|ref|ZP_09861629.1| iron ABC transporter substrate-binding protein [Bacteroides faecis
MAJ27]
Length = 378
Score = 42.0 bits (97), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 44/221 (19%), Positives = 96/221 (43%), Gaps = 18/221 (8%)
Query: 123 TTDSDQPQACNFANFAPFGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRV 182
TD + + + + E+ PL +AEW+ L ++ + ++++ + + Y L +
Sbjct: 171 VTDKLKELSIPYMYVGEYLEESPLGKAEWMVALSELTDSREKGIEIFSEIPKRYQTLKDL 230
Query: 183 AAGKTKPFKPIVAWMEFYNGVWSF-TKEAFKLKYVEDAGGENVDSSINKMTYNISNSDDL 241
A + +P V + +N W + +++ + V DAG + + + T N S L
Sbjct: 231 TASVEQ--RPTVMFNTPWNDSWIMPSTKSYMAQLVNDAGADYI---YKENTSNSSAPIGL 285
Query: 242 EQLHAILCTVD--VVIDGTYTLEPANYTQSTFLENIDAADKSCFAFLTNQSLWRFDKRNQ 299
E + ++ D + + TL+ F + +K+ + N +L R
Sbjct: 286 ETAYGLIQKADYWINVGMASTLDELKAVNPKFTDAKSVREKTAY----NNNL-RLTATGG 340
Query: 300 NSLALDWFDGAVSQPQLVLADLTEALFPT-GNYTITYFRNI 339
N ++++ AV +P +VL DL P + ++ Y+R++
Sbjct: 341 N----EYWESAVVRPDIVLRDLIHIFHPELVSDSLYYYRHL 377
>gi|409198264|ref|ZP_11226927.1| periplasmic binding protein [Marinilabilia salmonicolor JCM 21150]
Length = 382
Score = 42.0 bits (97), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 83/204 (40%), Gaps = 27/204 (13%)
Query: 142 EDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEFYN 201
E PL RAEW+ F G F + E A +++ + +Y+ + + P V +N
Sbjct: 194 ETSPLGRAEWMVFFGAFFDKEEMAAGLFSDIASSYISIKKEVEKSAS--TPSVLTGTLFN 251
Query: 202 GVWSF-TKEAFKLKYVEDAG-----GENVDSSINKMTYNISNSDDLEQLHAILCTVDVVI 255
VW +++ Y +DAG G+N + + + + +D + L TV+
Sbjct: 252 DVWYIPAGDSYMAAYFKDAGTEYAYGDNPGTGSLALDFE-TVFNDFRKSDFWLITVN--- 307
Query: 256 DGTYTLEPANYTQSTFLENIDAADKSCFAFLTNQSLWRFDKRNQNSLALDWFDGAVSQPQ 315
+T+ FL+ +D AF NQ ++ N+ +F+ + +P
Sbjct: 308 ------HDGRFTKEDFLQ-MDERYGDFEAFQDNQVIF------SNTDYSMFFERGIVEPD 354
Query: 316 LVLADLTEALFPT--GNYTITYFR 337
+VL DL P +Y YF
Sbjct: 355 VVLKDLVGCFHPEIYPDYEPVYFE 378
>gi|422441926|ref|ZP_16518735.1| conserved hypothetical protein [Propionibacterium acnes HL037PA3]
gi|422473251|ref|ZP_16549732.1| conserved hypothetical protein [Propionibacterium acnes HL037PA2]
gi|422573540|ref|ZP_16649102.1| conserved hypothetical protein [Propionibacterium acnes HL044PA1]
gi|313835348|gb|EFS73062.1| conserved hypothetical protein [Propionibacterium acnes HL037PA2]
gi|314928301|gb|EFS92132.1| conserved hypothetical protein [Propionibacterium acnes HL044PA1]
gi|314970000|gb|EFT14098.1| conserved hypothetical protein [Propionibacterium acnes HL037PA3]
Length = 294
Score = 42.0 bits (97), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 4/100 (4%)
Query: 142 EDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEFYN 201
E PL RAEW+K G+ N E + +N + + Y +T+ A KP V +
Sbjct: 175 EPTPLARAEWMKTYGVLLNMEGATRKDFNRIVKRYDEVTKKARHVIN--KPSVLVGQETK 232
Query: 202 GVWSFT-KEAFKLKYVEDAGGENV-DSSINKMTYNISNSD 239
G W +++ K++ DAG NV D ++ M ++S+
Sbjct: 233 GQWYVPGADSYMTKFMTDAGASNVMDQAVKGMGSAPTDSE 272
>gi|365122247|ref|ZP_09339152.1| hypothetical protein HMPREF1033_02498 [Tannerella sp.
6_1_58FAA_CT1]
gi|363642961|gb|EHL82295.1| hypothetical protein HMPREF1033_02498 [Tannerella sp.
6_1_58FAA_CT1]
Length = 375
Score = 42.0 bits (97), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 41/84 (48%), Gaps = 3/84 (3%)
Query: 140 FGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEF 199
+ E PL RAEWI+FLG+F E+ ++ ++ + +YL L +K +P V
Sbjct: 186 YMETMPLGRAEWIRFLGLFFGKESLSDSIFEKTERSYLTLKERVENVSK--RPTVVSEMK 243
Query: 200 YNGVWSFT-KEAFKLKYVEDAGGE 222
VW ++ ++ DAG +
Sbjct: 244 TGPVWYVPGGNSYMARFFADAGAD 267
>gi|393781217|ref|ZP_10369418.1| hypothetical protein HMPREF1071_00286 [Bacteroides salyersiae
CL02T12C01]
gi|392677552|gb|EIY70969.1| hypothetical protein HMPREF1071_00286 [Bacteroides salyersiae
CL02T12C01]
Length = 379
Score = 42.0 bits (97), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 44/211 (20%), Positives = 86/211 (40%), Gaps = 23/211 (10%)
Query: 123 TTDSDQPQACNFANFAPFGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRV 182
TD + + + + E+ PL +AEW+ L ++ + +V+ + Y L +
Sbjct: 172 VTDKMRELSIPYMYVGEYLEESPLGKAEWLIALSELTDSREKGIEVFREIPRRYQALKTL 231
Query: 183 AAGKTKPFKPIVAWMEFYNGVWSF-TKEAFKLKYVEDAGGENVDSSINKMTYNISNSD-- 239
+ +P V + +N W + +++ + V DAG + + N+SNS
Sbjct: 232 TESVEQ--RPTVMFNTPWNDSWVMPSTQSYMAQLVADAGADYIYKE------NVSNSSTP 283
Query: 240 -DLEQLHAILCTVD--VVIDGTYTLEPANYTQSTFLENIDAADKSCFAFLTNQSLWRFDK 296
LE + ++ D + + TL+ F + +K+ + N +L R
Sbjct: 284 IGLETAYGLIQKADYWINVGVASTLDELKAVNPKFADAKAVREKTVY----NNNL-RLTP 338
Query: 297 RNQNSLALDWFDGAVSQPQLVLADLTEALFP 327
N D+++ AV +P +VL DL P
Sbjct: 339 TGGN----DYWESAVVRPDVVLRDLIHIFHP 365
>gi|299147939|ref|ZP_07041002.1| Fe3+ ABC transporter, periplasmic iron-binding protein [Bacteroides
sp. 3_1_23]
gi|298514122|gb|EFI38008.1| Fe3+ ABC transporter, periplasmic iron-binding protein [Bacteroides
sp. 3_1_23]
Length = 396
Score = 41.6 bits (96), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 42/204 (20%), Positives = 90/204 (44%), Gaps = 18/204 (8%)
Query: 140 FGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEF 199
+ E+ PL +AEW+ L ++ + +++ + + Y L A ++ +P V
Sbjct: 206 YLEESPLGKAEWLVALAELTDSREKGIEIFREIPKRYQVLK--ALTESVEQRPTVMLNTP 263
Query: 200 YNGVWSF-TKEAFKLKYVEDAGGENVDSSINKMTYNISNSDDLEQLHAILCTVD--VVID 256
+N W + +++ + V DAG + + + T N S LE + ++ D + +
Sbjct: 264 WNDSWVMPSTQSYMAQLVTDAGADYI---YKENTSNSSTPIGLETAYKLIQKADYWINVG 320
Query: 257 GTYTLEPANYTQSTFLENIDAADKSCFAFLTNQSLWRFDKRNQNSLALDWFDGAVSQPQL 316
TL+ F++ +K+ + N +L R + D+++ AV +P +
Sbjct: 321 MASTLDELKTVNPKFVDAKAVREKTVY----NNNL-----RTTPTGGNDYWESAVVRPDV 371
Query: 317 VLADLTEALFPT-GNYTITYFRNI 339
VL DL P + ++ Y+R++
Sbjct: 372 VLRDLIHIFHPELVSDSLYYYRHL 395
>gi|399027384|ref|ZP_10728921.1| ABC-type Fe3+-hydroxamate transport system, periplasmic component
[Flavobacterium sp. CF136]
gi|398075261|gb|EJL66385.1| ABC-type Fe3+-hydroxamate transport system, periplasmic component
[Flavobacterium sp. CF136]
Length = 380
Score = 41.6 bits (96), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 55/247 (22%), Positives = 104/247 (42%), Gaps = 35/247 (14%)
Query: 3 SDISKVEDAQNFHIYYGQTFKVIKNAIDGRSYLLIQN-----NSRMAARTKYCTARI--- 54
++I+K E QN I Y ++K+ +G S +++ N N + K A++
Sbjct: 26 TEIAKTEIPQN-SIEYASGLSIVKH--EGYSVVMVTNPWPNANKKFTYVLKEKDAKVPDS 82
Query: 55 ----KSFVIPMSNYSVD--TDFFPGKLLGLLSSMKGM-TSESVASGCVLKLYQGGEIGLV 107
+ +P+ + V T+ ++L + S + G ++ V+S KL G + V
Sbjct: 83 LQKYSTIKVPLESVVVTSTTNIPFLEMLDVESKLTGFPHTDYVSSEKTRKLIDQGVVKNV 142
Query: 108 NKSEPLQFSQYA-------AHFTTDSDQPQACNFANF-------APFGEDGPLRRAEWIK 153
++E L Q F D++ P N A + E PL +AEWIK
Sbjct: 143 GQNEKLNMEQLIELSPDLIVTFGVDNNNPMLDNLKKSGLNVFIQADWMEQSPLGKAEWIK 202
Query: 154 FLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEFYNGVWSFTK-EAFK 212
G E +A ++++ + +Y ++ + TK V + Y VW K ++
Sbjct: 203 LYGALFGKEDKAKELFDKIVLSYEQTKKLVS--TKQATSTVLYGSMYEDVWYVAKGNSWV 260
Query: 213 LKYVEDA 219
++++DA
Sbjct: 261 AQFMKDA 267
>gi|442805651|ref|YP_007373800.1| putative iron (III) dicitrate transport substrate binding protein
[Clostridium stercorarium subsp. stercorarium DSM 8532]
gi|442741501|gb|AGC69190.1| putative iron (III) dicitrate transport substrate binding protein
[Clostridium stercorarium subsp. stercorarium DSM 8532]
Length = 329
Score = 41.6 bits (96), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 3/87 (3%)
Query: 150 EWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKP-FKPIVAWMEFYNGVWSFTK 208
E I+ +G NA A +V N +KE + + A GK +P +V + E+ G ++ T
Sbjct: 170 EIIELIGKILNAGEEAEKVINKMKETVSAVQKAAEGKERPSVYYVVGYGEY--GDYTATG 227
Query: 209 EAFKLKYVEDAGGENVDSSINKMTYNI 235
E F +E AGG+N+ + Y++
Sbjct: 228 ETFISDMIEMAGGDNIAADTTGWVYSL 254
>gi|363581201|ref|ZP_09314011.1| ABC transporter substrate-binding protein [Flavobacteriaceae
bacterium HQM9]
Length = 366
Score = 41.6 bits (96), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 38/82 (46%), Gaps = 3/82 (3%)
Query: 142 EDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEFYN 201
E PL RAEWIK G + A ++ ++ NY ++A K KP V Y
Sbjct: 177 ESHPLGRAEWIKVFGCLFEKQKEATVLFETIETNYQKGVQLA--KKNKIKPTVLSGNMYK 234
Query: 202 GVWSFT-KEAFKLKYVEDAGGE 222
VW ++ + ++DAGG+
Sbjct: 235 DVWYVPGGNSYAAQLIKDAGGD 256
>gi|404486784|ref|ZP_11021973.1| hypothetical protein HMPREF9448_02420 [Barnesiella intestinihominis
YIT 11860]
gi|404336041|gb|EJZ62505.1| hypothetical protein HMPREF9448_02420 [Barnesiella intestinihominis
YIT 11860]
Length = 376
Score = 41.6 bits (96), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 24/39 (61%)
Query: 138 APFGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENY 176
A + E PL RAEWIKF G+ E A+ ++ V++NY
Sbjct: 184 ADYLETSPLGRAEWIKFFGLLYGKEVEADSIFTEVEKNY 222
>gi|160885271|ref|ZP_02066274.1| hypothetical protein BACOVA_03270 [Bacteroides ovatus ATCC 8483]
gi|156109621|gb|EDO11366.1| periplasmic binding protein [Bacteroides ovatus ATCC 8483]
Length = 396
Score = 41.6 bits (96), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 42/204 (20%), Positives = 90/204 (44%), Gaps = 18/204 (8%)
Query: 140 FGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEF 199
+ E+ PL +AEW+ L ++ + +++ + + Y L A ++ +P V
Sbjct: 206 YLEESPLGKAEWLVALAELTDSREKGIEIFREIPKRYQVLK--ALTESVEQRPTVMLNTP 263
Query: 200 YNGVWSF-TKEAFKLKYVEDAGGENVDSSINKMTYNISNSDDLEQLHAILCTVD--VVID 256
+N W + +++ + V DAG + + + T N S LE + ++ D + +
Sbjct: 264 WNDSWVMPSTQSYMAQLVTDAGADYI---YKENTSNSSTPIGLETAYKLIQKADYWINVG 320
Query: 257 GTYTLEPANYTQSTFLENIDAADKSCFAFLTNQSLWRFDKRNQNSLALDWFDGAVSQPQL 316
TL+ F++ +K+ + N +L R + D+++ AV +P +
Sbjct: 321 MASTLDELKTVNPKFVDAKAVREKTVY----NNNL-----RTTPTGGNDYWESAVVRPDV 371
Query: 317 VLADLTEALFPT-GNYTITYFRNI 339
VL DL P + ++ Y+R++
Sbjct: 372 VLRDLIHIFHPELVSDSLYYYRHL 395
>gi|395206300|ref|ZP_10396866.1| periplasmic binding protein [Propionibacterium humerusii P08]
gi|422441930|ref|ZP_16518739.1| conserved domain protein [Propionibacterium acnes HL037PA3]
gi|422473255|ref|ZP_16549736.1| conserved domain protein [Propionibacterium acnes HL037PA2]
gi|422573544|ref|ZP_16649106.1| conserved domain protein [Propionibacterium acnes HL044PA1]
gi|313835353|gb|EFS73067.1| conserved domain protein [Propionibacterium acnes HL037PA2]
gi|314928306|gb|EFS92137.1| conserved domain protein [Propionibacterium acnes HL044PA1]
gi|314970005|gb|EFT14103.1| conserved domain protein [Propionibacterium acnes HL037PA3]
gi|328905892|gb|EGG25668.1| periplasmic binding protein [Propionibacterium humerusii P08]
Length = 156
Score = 41.6 bits (96), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 66/153 (43%), Gaps = 13/153 (8%)
Query: 191 KPIVAWMEFYNGVWSFT-KEAFKLKYVEDAGGENVDSSINKMTYNISNSDDLEQLHAILC 249
+P V + Y G+W E + ++++ DAGGE V I+ + S D E +
Sbjct: 12 RPSVLYGSEYKGIWYIKPNENYSIQFLRDAGGEYVFKDIHGVA---SKKLDTEAVLKQGH 68
Query: 250 TVDVVIDGTYTLEPANYTQSTFLENIDAADKSCFAFLTNQSLWRFDKRNQNSLALDWFDG 309
+ IDG P + L++ D KS A + N ++W R D++
Sbjct: 69 DAEFWIDG-----PEKSSVPEILKS-DPRLKSLKA-MNNGNVWDSTLRADPKHGNDYWQT 121
Query: 310 AVSQPQLVLADLTEALFPTGN--YTITYFRNIA 340
V +P LVLADL L P N + ++R A
Sbjct: 122 GVVRPDLVLADLATILHPELNADHQFYFYRKAA 154
>gi|410666716|ref|YP_006919087.1| iron ABC transporter substrate binding protein [Thermacetogenium
phaeum DSM 12270]
gi|409104463|gb|AFV10588.1| putative iron ABC transporter, periplasmic binding protein
[Thermacetogenium phaeum DSM 12270]
Length = 374
Score = 41.6 bits (96), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 89/205 (43%), Gaps = 28/205 (13%)
Query: 142 EDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLT-RVAAGKTKPFKPIVAWMEFY 200
E+ PL R EWIKF+ F + E +A+ ++ ++ +T +VA K KP V W Y
Sbjct: 188 ENDPLGRLEWIKFIAAFYDKEQQASDFFDGAEKRIAEITAKVAKVKDKPK---VIWGLIY 244
Query: 201 NG-VWSFTKEAFKLKYVEDAGGENVDSSINKMTYNISNSDDLEQLHAILCTVDVVIDGTY 259
G + +++ + + AGG+ + NK T S + E+ +A+ D+ ID T
Sbjct: 245 QGKAYVPAADSYVARMIAMAGGDYLFKG-NKGTG--SRAITFEEYYALGKEADIYIDDTM 301
Query: 260 TLEPANYTQSTFLENIDAAD-KSCFAFLTNQSLWRFDKRNQNSLALDWFDGAVSQPQLVL 318
N ++T D + + L ++W + W+ ++ + V+
Sbjct: 302 M----NLGRNTIAHITDQSRLMADLPVLKKGNVWGYQP---------WYWQSLDKTDEVI 348
Query: 319 ADLTE----ALFPTGNYTITYFRNI 339
DL ALFP Y + +F +
Sbjct: 349 EDLAAIFHPALFP--GYQLKHFLKL 371
>gi|423296917|ref|ZP_17274987.1| hypothetical protein HMPREF1070_03652 [Bacteroides ovatus
CL03T12C18]
gi|392669294|gb|EIY62785.1| hypothetical protein HMPREF1070_03652 [Bacteroides ovatus
CL03T12C18]
Length = 377
Score = 41.6 bits (96), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 41/204 (20%), Positives = 89/204 (43%), Gaps = 18/204 (8%)
Query: 140 FGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEF 199
+ E+ PL +AEW+ L ++ + +++ + + Y L + + +P V
Sbjct: 187 YLEESPLGKAEWLVALAELTDSREKGIEIFREIPKRYQVLKALTESVEQ--RPTVMLNTP 244
Query: 200 YNGVWSF-TKEAFKLKYVEDAGGENVDSSINKMTYNISNSDDLEQLHAILCTVD--VVID 256
+N W + +++ + V DAG + + + T N S LE + ++ D + +
Sbjct: 245 WNDSWVMPSTQSYMAQLVTDAGADYI---YKENTSNSSTPIGLETAYKLIQKADYWINVG 301
Query: 257 GTYTLEPANYTQSTFLENIDAADKSCFAFLTNQSLWRFDKRNQNSLALDWFDGAVSQPQL 316
TL+ F++ +K+ + N +L R + D+++ AV +P +
Sbjct: 302 MASTLDELKTVNPKFVDAKAVREKTVY----NNNL-----RTTPTGGNDYWESAVVRPDV 352
Query: 317 VLADLTEALFPT-GNYTITYFRNI 339
VL DL P + ++ Y+R++
Sbjct: 353 VLRDLIHIFHPELVSDSLYYYRHL 376
>gi|383112115|ref|ZP_09932914.1| hypothetical protein BSGG_3775 [Bacteroides sp. D2]
gi|382949125|gb|EFS33075.2| hypothetical protein BSGG_3775 [Bacteroides sp. D2]
Length = 377
Score = 41.6 bits (96), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 41/204 (20%), Positives = 89/204 (43%), Gaps = 18/204 (8%)
Query: 140 FGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEF 199
+ E+ PL +AEW+ L ++ + +++ + + Y L + + +P V
Sbjct: 187 YLEESPLGKAEWLVALAELTDSREKGIEIFREIPKRYQVLKALTESVEQ--RPTVMLNTP 244
Query: 200 YNGVWSF-TKEAFKLKYVEDAGGENVDSSINKMTYNISNSDDLEQLHAILCTVD--VVID 256
+N W + +++ + V DAG + + + T N S LE + ++ D + +
Sbjct: 245 WNDSWVMPSTQSYMAQLVTDAGADYI---YKENTSNSSTPIGLETAYKLIQKADYWINVG 301
Query: 257 GTYTLEPANYTQSTFLENIDAADKSCFAFLTNQSLWRFDKRNQNSLALDWFDGAVSQPQL 316
TL+ F++ +K+ + N +L R + D+++ AV +P +
Sbjct: 302 MASTLDELKTVNPKFVDAKAVREKTVY----NNNL-----RTTPTGGNDYWESAVVRPDV 352
Query: 317 VLADLTEALFPT-GNYTITYFRNI 339
VL DL P + ++ Y+R++
Sbjct: 353 VLRDLIHIFHPELVSDSLYYYRHL 376
>gi|237720063|ref|ZP_04550544.1| Fe3 ABC transporter [Bacteroides sp. 2_2_4]
gi|229450615|gb|EEO56406.1| Fe3 ABC transporter [Bacteroides sp. 2_2_4]
Length = 377
Score = 41.6 bits (96), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 41/204 (20%), Positives = 89/204 (43%), Gaps = 18/204 (8%)
Query: 140 FGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEF 199
+ E+ PL +AEW+ L ++ + +++ + + Y L + + +P V
Sbjct: 187 YLEESPLGKAEWLVALAELTDSREKGIEIFREIPKRYQVLKALTESVEQ--RPTVMLNTP 244
Query: 200 YNGVWSF-TKEAFKLKYVEDAGGENVDSSINKMTYNISNSDDLEQLHAILCTVD--VVID 256
+N W + +++ + V DAG + + + T N S LE + ++ D + +
Sbjct: 245 WNDSWVMPSTQSYMAQLVTDAGADYI---YKENTSNSSTPIGLETAYKLIQKADYWINVG 301
Query: 257 GTYTLEPANYTQSTFLENIDAADKSCFAFLTNQSLWRFDKRNQNSLALDWFDGAVSQPQL 316
TL+ F++ +K+ + N +L R + D+++ AV +P +
Sbjct: 302 MASTLDELKTVNPKFVDAKAVREKTVY----NNNL-----RTTPTGGNDYWESAVVRPDV 352
Query: 317 VLADLTEALFPT-GNYTITYFRNI 339
VL DL P + ++ Y+R++
Sbjct: 353 VLRDLIHIFHPELVSDSLYYYRHL 376
>gi|224026788|ref|ZP_03645154.1| hypothetical protein BACCOPRO_03545 [Bacteroides coprophilus DSM
18228]
gi|224020024|gb|EEF78022.1| hypothetical protein BACCOPRO_03545 [Bacteroides coprophilus DSM
18228]
Length = 379
Score = 41.2 bits (95), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 94/212 (44%), Gaps = 26/212 (12%)
Query: 138 APFGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWM 197
A + E L RAEW++ G+ EA+A+ ++ +++ YL LT+ + +++ M
Sbjct: 186 ADYMETSALGRAEWMRLYGLLLGKEAQADSLFAGIEKEYLTLTQQVKSQNLKRPTVISEM 245
Query: 198 EFYNGVWSFTKEAFKLKYVEDAGGENVDSSINKMTYNISNSDDLEQLHAILCTVDVVID- 256
+ + + + + +DAG + V +S +SNS ++ + V D
Sbjct: 246 KNSSAWYIPGGNSTMGRLYQDAGADYVFAS-------LSNSG------SVPLAFETVFDR 292
Query: 257 -GTYTLEPANYTQ---STFLE-NIDAADKSCFAFLTNQSLWRFDKRNQNSLALDWFDGAV 311
G + Y Q T+ E D A + F ++ ++ N+ + +++ +
Sbjct: 293 GGNADIWLIKYNQPQDKTYSELERDYAPYARFKAFQDRKVY-----GCNTNHVPFYEESP 347
Query: 312 SQPQLVLADLTEALFPT--GNYTITYFRNIAK 341
P+L+L DL + P +Y + YF N+A+
Sbjct: 348 FHPELLLKDLIKIFHPELLPDYDLKYFSNLAE 379
>gi|374597488|ref|ZP_09670492.1| ABC-type transporter, periplasmic subunit [Gillisia limnaea DSM
15749]
gi|373872127|gb|EHQ04125.1| ABC-type transporter, periplasmic subunit [Gillisia limnaea DSM
15749]
Length = 377
Score = 41.2 bits (95), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 75/360 (20%), Positives = 140/360 (38%), Gaps = 42/360 (11%)
Query: 4 DISKVEDAQNFHIYYGQTFKVIK------NAIDGRSYLLIQNNSRMAARTKY---CTARI 54
D +E A+ F I FK++K A +YLL+ S++ Y +
Sbjct: 31 DTLAIEYAKGFSIIQYDGFKILKVKNPWPEADKTYTYLLVVEESKVPQSIAYDHKINIPV 90
Query: 55 KSFVIPMSNYSVDTDFF---------PGKLLGLLSSMKGMTSESVASGCVLKLYQGGEIG 105
K V+ + + + F PG L +SS K T + + G V +L + +I
Sbjct: 91 KKLVVTSTTHIPSLEAFQEEKTLIGFPG--LDYISSKK--TRDRIKEGKVTELGKNEDIN 146
Query: 106 --LVNKSEP---LQFSQYAAHFTTDSDQPQACNFANFAPFGEDGPLRRAEWIKFLGIFAN 160
++ +P + F+ + T ++ + + E+ PL +AEWIKF G N
Sbjct: 147 TEVLISLQPEAVIGFAVNGTNKTFNTLEKSGIPVLFNGDWTEESPLGKAEWIKFFGALFN 206
Query: 161 AEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEFYNGVWSFT-KEAFKLKYVEDA 219
A + V+ YL ++A K+ P V Y W +++ ++++DA
Sbjct: 207 KTKEATLYFQEVETAYLDAKKLA--KSASSSPTVLSGSMYKDQWYVPYGDSWSAQFIKDA 264
Query: 220 GGENVDSSINKMTYNISNSDDLEQLHAILCTVDVVIDGTYTLEPANYTQSTFLENIDAAD 279
N + N S S + A + + + + P + L N +
Sbjct: 265 NA-------NYIYKNTSGSGSIAL--AFETVLSEAQNADFWIAPGQFKTFNQL-NESSVH 314
Query: 280 KSCFAFLTNQSLWRFDKRNQNSLALDWFDGAVSQPQLVLADLTEALFPT--GNYTITYFR 337
+ F + N+ ++ + + + +++ A +P LVL DL P Y T+F+
Sbjct: 315 YNQFEAVKNKQVFTYSNTLGETGGVIYYELAPIRPDLVLKDLIALFHPELLPKYEPTFFK 374
>gi|307564696|ref|ZP_07627226.1| putative lipoprotein [Prevotella amnii CRIS 21A-A]
gi|307346624|gb|EFN91931.1| putative lipoprotein [Prevotella amnii CRIS 21A-A]
Length = 382
Score = 41.2 bits (95), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 27/46 (58%)
Query: 138 APFGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVA 183
A + E L RAEW+KF G+ + E A+ ++N VK NY L +A
Sbjct: 189 AEYMESSALGRAEWMKFYGMLFDKEKEADSLFNIVKNNYWRLHSLA 234
>gi|423215395|ref|ZP_17201922.1| hypothetical protein HMPREF1074_03454 [Bacteroides xylanisolvens
CL03T12C04]
gi|392691963|gb|EIY85203.1| hypothetical protein HMPREF1074_03454 [Bacteroides xylanisolvens
CL03T12C04]
Length = 377
Score = 40.8 bits (94), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 41/204 (20%), Positives = 88/204 (43%), Gaps = 18/204 (8%)
Query: 140 FGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEF 199
+ E+ PL +AEW+ L ++ + +++ + + Y L + + +P V
Sbjct: 187 YLEESPLGKAEWLVALSELTDSRKKGIEIFREIPKRYQVLKALTESVEQ--RPTVMLNTP 244
Query: 200 YNGVWSF-TKEAFKLKYVEDAGGENVDSSINKMTYNISNSDDLEQLHAILCTVD--VVID 256
+N W + +++ + V DAG + + N N S LE + ++ D + +
Sbjct: 245 WNDSWVMPSTQSYMAQLVTDAGADYIYKENNS---NSSTPIGLETAYKLIQKADYWINVG 301
Query: 257 GTYTLEPANYTQSTFLENIDAADKSCFAFLTNQSLWRFDKRNQNSLALDWFDGAVSQPQL 316
TL+ F++ +K+ + N +L R + D+++ AV +P +
Sbjct: 302 MASTLDELKTVNPKFVDAKAVREKTVY----NNNL-----RTTPTGGNDYWESAVVRPDV 352
Query: 317 VLADLTEALFPT-GNYTITYFRNI 339
VL DL P + ++ Y+R++
Sbjct: 353 VLRDLIHIFHPELVSDSLYYYRHL 376
>gi|392867455|gb|EAS29313.2| hypothetical protein CIMG_07743 [Coccidioides immitis RS]
Length = 393
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 61/118 (51%), Gaps = 11/118 (9%)
Query: 78 LLSSMKGMTSESVASGCVLKLYQGGEIGLVNKSEPLQFSQYAAHFTTDSDQPQACNFANF 137
LLS + ++ SVA+G LK++ G G ++ E LQ Q F ++SD+P++C AN
Sbjct: 112 LLSPICHLSQSSVAAGNYLKIW--GIRGKRHQGEGLQLIQI---FMSESDKPRSCPRANN 166
Query: 138 APFGEDGPLRR----AEWIKFLGIFANAEARANQVYNAVKEN-YLCLTRVAAGKTKPF 190
+ D P R E+ + F+ +A A+ + VK Y+C+ V A +T+ F
Sbjct: 167 QTW-TDSPSTRWKFAGEYRESPASFSKLDAGASATLSDVKRQVYICVLCVKAAETQVF 223
>gi|402847374|ref|ZP_10895666.1| oligopeptide ABC transporter, oligopeptide-binding protein
[Porphyromonas sp. oral taxon 279 str. F0450]
gi|402266517|gb|EJU15944.1| oligopeptide ABC transporter, oligopeptide-binding protein
[Porphyromonas sp. oral taxon 279 str. F0450]
Length = 386
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Query: 137 FAPFGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAW 196
F + E L RAEW+KF+G+ RA + + ++ YL ++AA + F PI+ +
Sbjct: 191 FNNWKEQSLLGRAEWMKFIGMLFGRNVRAEETFQRIEREYLEAKKIAA-QEPDFLPIL-Y 248
Query: 197 MEFYNGVWSFTKE 209
+ Y G W E
Sbjct: 249 GQDYKGSWYVPGE 261
>gi|229495445|ref|ZP_04389180.1| iron siderophore/cobalamin periplasmic-binding domain protein
[Porphyromonas endodontalis ATCC 35406]
gi|229317888|gb|EEN83786.1| iron siderophore/cobalamin periplasmic-binding domain protein
[Porphyromonas endodontalis ATCC 35406]
Length = 395
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 77/191 (40%), Gaps = 18/191 (9%)
Query: 142 EDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEFYN 201
E PL RAEW+KF+G+ A+ +++A Y L +A + +P +P V + +
Sbjct: 204 ERTPLGRAEWLKFIGLLMGKAKTADSLFSATASRYESLRLIA--QDRPERPRVVFAQRVE 261
Query: 202 GVWSFTKEAFKLKY-VEDAGGENVDSSINKMTYNISNSDDLEQLHAILCTVDVVIDGTYT 260
W A Y + DA + V + + +S+ + L + + I G T
Sbjct: 262 NGWQIPYPAGYADYLLHDANSKFVPLKGSIVGLTLSSQELLGRYRDAEYWLSWEIPGIQT 321
Query: 261 LEPANYTQSTFLENIDAADKSCFAFLTNQSLWR---FDKRNQNSLALDWFDGAVSQPQLV 317
LE F E +D + AF Q D + N ++++ P L+
Sbjct: 322 LE-------QFGE-LDPEIRGIQAFRNGQVYLNTRLVDIQGGN----EYWEQGWYHPDLI 369
Query: 318 LADLTEALFPT 328
L DL L P+
Sbjct: 370 LQDLVYILHPS 380
>gi|410099000|ref|ZP_11293974.1| hypothetical protein HMPREF1076_03152 [Parabacteroides goldsteinii
CL02T12C30]
gi|409220131|gb|EKN13088.1| hypothetical protein HMPREF1076_03152 [Parabacteroides goldsteinii
CL02T12C30]
Length = 372
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 41/88 (46%), Gaps = 3/88 (3%)
Query: 138 APFGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWM 197
A + E PL R EWI+F G+ EA A+ ++ K YL L +A KT +P V
Sbjct: 181 ADYMESLPLGRTEWIRFYGLLFGKEAMADSIFRETKGRYLELKELA--KTVTNRPTVISE 238
Query: 198 EFYNGVWSF-TKEAFKLKYVEDAGGENV 224
+ + W +++ DAG + +
Sbjct: 239 KKFGSSWYMPAGDSYVAHLYNDAGADYI 266
>gi|357042501|ref|ZP_09104206.1| hypothetical protein HMPREF9138_00678 [Prevotella histicola F0411]
gi|355369453|gb|EHG16848.1| hypothetical protein HMPREF9138_00678 [Prevotella histicola F0411]
Length = 369
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 29/47 (61%)
Query: 138 APFGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAA 184
A + E+ L RAEW+KF G+ E A+ ++ V++NY L+R A+
Sbjct: 181 ADYMEESALGRAEWMKFYGLLYGREREADSLFAVVEKNYQALSRRAS 227
>gi|334321415|ref|YP_004557955.1| ABC transporter periplasmic protein [Sinorhizobium meliloti AK83]
gi|334100203|gb|AEG58211.1| ABC-type transporter, periplasmic subunit [Sinorhizobium meliloti
AK83]
Length = 388
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 57/119 (47%), Gaps = 16/119 (13%)
Query: 145 PLRRAE-WIKFLGIFANAEARANQVYNAVKENYLCLTRVA--AGKTKPFKPIVAWMEFYN 201
PL+ E I+ LG EARA ++ + + +TRVA +TKP +P V ++E
Sbjct: 166 PLKNTEPTIRLLGKIMGREARAEEI---IAFRHQAMTRVADVIAQTKPERPRV-FIERIG 221
Query: 202 G-----VWSFTKEAFKLKYVEDAGGENVDSSINKMTYNISNSDDL---EQLHAILCTVD 252
G SF E F KYVE AGG N+ S + T+ N + + H ++ + D
Sbjct: 222 GYADDCCLSFGAENFG-KYVELAGGHNIGSDVLPSTFGQLNPEQVIAANPEHVVVTSAD 279
>gi|336416693|ref|ZP_08597026.1| hypothetical protein HMPREF1017_04134 [Bacteroides ovatus
3_8_47FAA]
gi|335937750|gb|EGM99648.1| hypothetical protein HMPREF1017_04134 [Bacteroides ovatus
3_8_47FAA]
Length = 377
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 91/204 (44%), Gaps = 18/204 (8%)
Query: 140 FGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEF 199
+ E+ PL +AEW+ L ++ + +++ + + Y L + + +P V
Sbjct: 187 YLEESPLGKAEWLVALAELTDSREKGIEIFREIPKRYQVLKALTESVEQ--RPTVMLNTP 244
Query: 200 YNGVWSF-TKEAFKLKYVEDAGGENVDSSINKMTYNISNSDDLEQLHAILCTVDVVID-G 257
+N W + +++ + V DAG + + NK N S LE + ++ D I+ G
Sbjct: 245 WNDSWVMPSTQSYMAQLVTDAGADYIYQE-NKS--NSSTPIGLETAYKLIQKADYWINVG 301
Query: 258 T-YTLEPANYTQSTFLENIDAADKSCFAFLTNQSLWRFDKRNQNSLALDWFDGAVSQPQL 316
T TL+ F++ +K+ + N +L R + D+++ AV +P +
Sbjct: 302 TASTLDELKTVNPKFVDAKAVREKTVY----NNNL-----RTTPTGGNDYWESAVVRPDV 352
Query: 317 VLADLTEALFPT-GNYTITYFRNI 339
VL DL P + ++ Y+R++
Sbjct: 353 VLRDLIHIFHPELVSDSLYYYRHL 376
>gi|146297849|ref|YP_001192440.1| periplasmic binding protein [Flavobacterium johnsoniae UW101]
gi|146152267|gb|ABQ03121.1| periplasmic binding protein [Flavobacterium johnsoniae UW101]
Length = 380
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 41/192 (21%), Positives = 84/192 (43%), Gaps = 23/192 (11%)
Query: 142 EDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEFYN 201
E PL +AEWIK G E +A ++++ + ++Y ++AA K V + Y
Sbjct: 191 EQSPLGKAEWIKLYGALFGKEEKAKELFDKIVQSYEQAKKLAA--EKEVNSTVLYGSMYE 248
Query: 202 GVWSFTK-EAFKLKYVEDAGGENVDSSINKMTYNISNSDDLEQLHAILCTVDVVIDGTYT 260
VW K ++ ++++DA + + DL+ + + + V+D T
Sbjct: 249 DVWYVAKGNSWVAEFMKDAHANYLWA-------------DLKGTGSEGLSFEKVLDKAKT 295
Query: 261 LEPANYTQSTFLENIDAADKSC-----FAFLTNQSLWRFDKRNQNSLALDWFDGAVSQPQ 315
+ + S +++D K+ F N++++ F+ + + +++ A S+P
Sbjct: 296 --ASVWIASGSFKSLDELQKANPHYGEFDAFKNKNVYSFEGKLGATGGTVYYELAPSRPD 353
Query: 316 LVLADLTEALFP 327
LVL D + P
Sbjct: 354 LVLKDYIKIFHP 365
>gi|288802807|ref|ZP_06408244.1| conserved hypothetical protein [Prevotella melaninogenica D18]
gi|288334624|gb|EFC73062.1| conserved hypothetical protein [Prevotella melaninogenica D18]
Length = 378
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 28/47 (59%)
Query: 138 APFGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAA 184
A + E L RAEW+KF GI E A+ ++ VK+NY L++ A+
Sbjct: 189 ADYMERSALGRAEWMKFYGILFGREQEADSLFAVVKQNYKSLSQKAS 235
>gi|357386650|ref|YP_004901374.1| Vitamin B12 ABC transporter, B12-binding component BtuF
[Pelagibacterium halotolerans B2]
gi|351595287|gb|AEQ53624.1| Vitamin B12 ABC transporter, B12-binding component BtuF
[Pelagibacterium halotolerans B2]
Length = 398
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 26/48 (54%)
Query: 142 EDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKP 189
E PL +EW+KFL F N E ANQ ++A++ Y + G+ P
Sbjct: 208 EPTPLASSEWLKFLSAFYNVEDHANQHFDAIEARYQEVVEKVEGQLPP 255
>gi|302346329|ref|YP_003814627.1| putative lipoprotein [Prevotella melaninogenica ATCC 25845]
gi|302150514|gb|ADK96775.1| putative lipoprotein [Prevotella melaninogenica ATCC 25845]
Length = 383
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 28/47 (59%)
Query: 138 APFGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAA 184
A + E L RAEW+KF GI E A+ ++ VK+NY L++ A+
Sbjct: 194 ADYMERSALGRAEWMKFYGILFGREHEADSLFAVVKQNYKSLSQKAS 240
>gi|282881701|ref|ZP_06290364.1| periplasmic binding protein [Prevotella timonensis CRIS 5C-B1]
gi|281304460|gb|EFA96557.1| periplasmic binding protein [Prevotella timonensis CRIS 5C-B1]
Length = 383
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 23/46 (50%)
Query: 131 ACNFANFAPFGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENY 176
C A + E PL RAEW+KF G+ E RA+ ++ V Y
Sbjct: 184 GCPVIELADYMETSPLGRAEWMKFYGMLFGCEQRADSLFAVVDSAY 229
>gi|404422921|ref|ZP_11004591.1| periplasmic binding protein [Mycobacterium fortuitum subsp.
fortuitum DSM 46621]
gi|403655443|gb|EJZ10299.1| periplasmic binding protein [Mycobacterium fortuitum subsp.
fortuitum DSM 46621]
Length = 400
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 142 EDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEFYN 201
E PL RAEWIK + E +A Q Y +++ Y L+ AA +V M Y+
Sbjct: 211 EPTPLGRAEWIKMFAALTSTERQAEQTYRQIRDGYHALSARAAAARS-VDVLVGAM--YS 267
Query: 202 GVWSF-TKEAFKLKYVEDAGG 221
G WS T ++ + V DAGG
Sbjct: 268 GNWSMPTGASYPGRLVADAGG 288
>gi|300728115|ref|ZP_07061487.1| periplasmic binding protein [Prevotella bryantii B14]
gi|299774629|gb|EFI71249.1| periplasmic binding protein [Prevotella bryantii B14]
Length = 376
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 39/86 (45%), Gaps = 3/86 (3%)
Query: 138 APFGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWM 197
A + E L RAEW+KF G+ E AN ++ A+ Y L +A K +P+V
Sbjct: 187 AEYMETSSLGRAEWMKFYGLLYGKEKEANALFTAIVHEYQRLKALAMSTKK--RPVVITE 244
Query: 198 EFYNGVWSFT-KEAFKLKYVEDAGGE 222
VW + ++DAGG+
Sbjct: 245 RKTGSVWYVPGGGSTTAATIKDAGGQ 270
>gi|255307980|ref|ZP_05352151.1| putative iron ABC transporter, substrate-binding protein
[Clostridium difficile ATCC 43255]
Length = 376
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 85/218 (38%), Gaps = 32/218 (14%)
Query: 131 ACNFANFAPFGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPF 190
N+ + E P R EW + F + E A N + + V+
Sbjct: 184 GLNYVVDNEYKEQNPFGRMEWTSLIAAFYDKEDMATSELNKTVQK---VEEVSKKIKNKA 240
Query: 191 KPIVAWMEFYNG-VWSFTKEAFKLKYVEDAGGENVDSSINKMTYNISNSDDLEQLHAILC 249
KP V W Y G + K+++ ++ AGG N +SI+ +S +EQLH +
Sbjct: 241 KPKVVWASVYEGSAYIAPKDSYVDNMIKMAGGINACASIDSNEGRVS----IEQLHEVAK 296
Query: 250 TVDVVIDGTYTLEPANYTQSTFLENIDAADKSC-----FAFLTNQSLWRFDKRNQNSLAL 304
D+ + Y+ + S + N+D+ S + N +LW F A
Sbjct: 297 DADIFV---YS------SSSDYAPNLDSIKSSAPVLVDLDVVKNGNLWVF--------AP 339
Query: 305 DWFDGAVSQPQLVLADLTEALFP-TGNYTITYFRNIAK 341
D++ +V + ++ DL E P T I ++ N K
Sbjct: 340 DYYQ-SVDKTDELIVDLVEMFHPGTTGEKIKHYINYDK 376
>gi|126700620|ref|YP_001089517.1| ABC transporter iron-family extracellular solute-binding protein
[Clostridium difficile 630]
gi|423084872|ref|ZP_17073333.1| periplasmic binding protein [Clostridium difficile 050-P50-2011]
gi|423092077|ref|ZP_17079885.1| periplasmic binding protein [Clostridium difficile 70-100-2010]
gi|115252057|emb|CAJ69893.1| ABC-type transport system, iron-family extracellular solute-binding
protein [Clostridium difficile 630]
gi|357551276|gb|EHJ33069.1| periplasmic binding protein [Clostridium difficile 050-P50-2011]
gi|357554725|gb|EHJ36436.1| periplasmic binding protein [Clostridium difficile 70-100-2010]
Length = 379
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 85/218 (38%), Gaps = 32/218 (14%)
Query: 131 ACNFANFAPFGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPF 190
N+ + E P R EW + F + E A N + + V+
Sbjct: 187 GLNYVVDNEYKEQNPFGRMEWTSLIAAFYDKEDMATSELNKTVQK---VEEVSKKIKNKA 243
Query: 191 KPIVAWMEFYNG-VWSFTKEAFKLKYVEDAGGENVDSSINKMTYNISNSDDLEQLHAILC 249
KP V W Y G + K+++ ++ AGG N +SI+ +S +EQLH +
Sbjct: 244 KPKVVWASVYEGSAYIAPKDSYVDNMIKMAGGINACASIDSNEGRVS----IEQLHEVAK 299
Query: 250 TVDVVIDGTYTLEPANYTQSTFLENIDAADKSC-----FAFLTNQSLWRFDKRNQNSLAL 304
D+ + Y+ + S + N+D+ S + N +LW F A
Sbjct: 300 DADIFV---YS------SSSDYAPNLDSIKSSAPVLADLDVVKNGNLWVF--------AP 342
Query: 305 DWFDGAVSQPQLVLADLTEALFP-TGNYTITYFRNIAK 341
D++ +V + ++ DL E P T I ++ N K
Sbjct: 343 DYYQ-SVDKTDELIVDLVEMFHPGTTGEKIKHYINYDK 379
>gi|325270131|ref|ZP_08136738.1| hypothetical protein HMPREF9141_1948 [Prevotella multiformis DSM
16608]
gi|324987432|gb|EGC19408.1| hypothetical protein HMPREF9141_1948 [Prevotella multiformis DSM
16608]
Length = 373
Score = 40.0 bits (92), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 40/86 (46%), Gaps = 4/86 (4%)
Query: 138 APFGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWM 197
A + E L RAEW+KF G+ E A+ +++ V+ NY L+R A KT K +
Sbjct: 184 ADYMEASALGRAEWMKFYGLLYGKEKEADSLFSLVERNYKALSRKA--KTSRTKRSILPD 241
Query: 198 EFYNGVWSFT--KEAFKLKYVEDAGG 221
VW K + L Y + GG
Sbjct: 242 RKVGAVWYLPGGKSSVGLLYKDAQGG 267
>gi|322702620|gb|EFY94254.1| periplasmic binding protein [Metarhizium anisopliae ARSEF 23]
Length = 522
Score = 40.0 bits (92), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 62/303 (20%), Positives = 123/303 (40%), Gaps = 48/303 (15%)
Query: 74 KLLGLLSSMK--GMTSESVASGCV---LKLYQGGEIGLVNKSEPLQFSQYAAHFTTDSDQ 128
++LG+ +S+K G+ S+ V S C+ +K + +K+ + + Y T+D+ +
Sbjct: 108 EMLGMSTSLKRTGVYSD-VTSSCIRGNMKDNITFDDDEWDKAPEVDVTFYGDTATSDNKK 166
Query: 129 PQACNFANFAPFGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLC----LTRVAA 184
N N+AP + G +IKF+ +F E ++Y+ + NY C + +
Sbjct: 167 VLIYNVGNYAPLAQLG------YIKFVSMFFGLEELGEKLYDEISANYRCAAAQVQQAIM 220
Query: 185 GKTKPFKPIVAWMEFYNGVWSFTKEAFKLKYVEDAGGENVDSSINKMTYNISNSDDLEQL 244
T P +++ + ++ + A+ + DAG V+ S + N
Sbjct: 221 AGTYPTGALISPIRKDGDKFTVFQSAWWNSILSDAGSALVNVSADGQASETGNP-----T 275
Query: 245 HAILCTVD-------------VVIDGT-YTLEPANYTQSTFLENI----------DAADK 280
L T+D +ID T Y P T E+ A
Sbjct: 276 KPGLVTIDANSAGNNFARNSWAIIDTTQYDQLPGKQAPKTLPESTRITADTYTSRSGASS 335
Query: 281 SCFAFLTNQSLWRFDKRNQNSLALDWFDGAVSQPQLVLADLTEALFPT--GNYTITYFRN 338
+ +A N ++W DK + ++FD ++P V+ D+ + P+ +Y+ + R+
Sbjct: 336 ASYAVKKN-NVWLTDKAANRNRRHNFFDRGSARPDQVIRDIISIVSPSFLPDYSNMFIRS 394
Query: 339 IAK 341
++K
Sbjct: 395 VSK 397
>gi|254976547|ref|ZP_05273019.1| putative iron ABC transporter, substrate-binding protein
[Clostridium difficile QCD-66c26]
gi|255093931|ref|ZP_05323409.1| putative iron ABC transporter, substrate-binding protein
[Clostridium difficile CIP 107932]
gi|255102111|ref|ZP_05331088.1| putative iron ABC transporter, substrate-binding protein
[Clostridium difficile QCD-63q42]
gi|255315683|ref|ZP_05357266.1| putative iron ABC transporter, substrate-binding protein
[Clostridium difficile QCD-76w55]
gi|255518344|ref|ZP_05386020.1| putative iron ABC transporter, substrate-binding protein
[Clostridium difficile QCD-97b34]
gi|255651462|ref|ZP_05398364.1| putative iron ABC transporter, substrate-binding protein
[Clostridium difficile QCD-37x79]
gi|260684520|ref|YP_003215805.1| iron ABC transporter substrate-binding protein [Clostridium
difficile CD196]
gi|260688178|ref|YP_003219312.1| iron ABC transporter substrate-binding protein [Clostridium
difficile R20291]
gi|306521286|ref|ZP_07407633.1| putative iron ABC transporter, substrate-binding protein
[Clostridium difficile QCD-32g58]
gi|384362170|ref|YP_006200022.1| iron ABC transporter substrate-binding protein [Clostridium
difficile BI1]
gi|260210683|emb|CBA65451.1| putative iron ABC transporter, substrate-binding protein
[Clostridium difficile CD196]
gi|260214195|emb|CBE06448.1| putative iron ABC transporter, substrate-binding protein
[Clostridium difficile R20291]
Length = 376
Score = 40.0 bits (92), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 85/218 (38%), Gaps = 32/218 (14%)
Query: 131 ACNFANFAPFGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPF 190
N+ + E P R EW + F + E A N + + V+
Sbjct: 184 GLNYVVDNEYKEQNPFGRMEWTSLIAAFYDKEDMATSELNKTVQK---VEEVSKKIKNKA 240
Query: 191 KPIVAWMEFYNG-VWSFTKEAFKLKYVEDAGGENVDSSINKMTYNISNSDDLEQLHAILC 249
KP V W Y G + K+++ ++ AGG N +SI+ +S +EQLH +
Sbjct: 241 KPKVVWASVYEGSAYIAPKDSYVDNMIKMAGGINACASIDSNEGRVS----IEQLHEVAK 296
Query: 250 TVDVVIDGTYTLEPANYTQSTFLENIDAADKSC-----FAFLTNQSLWRFDKRNQNSLAL 304
D+ + Y+ + S + N+D+ S + N +LW F A
Sbjct: 297 DADIFV---YS------SSSDYAPNLDSIKSSAPVLADLDVVKNGNLWVF--------AP 339
Query: 305 DWFDGAVSQPQLVLADLTEALFP-TGNYTITYFRNIAK 341
D++ +V + ++ DL E P T I ++ N K
Sbjct: 340 DYYQ-SVDKTDELIVDLVEMFHPGTTGEKIKHYINYDK 376
>gi|282877687|ref|ZP_06286502.1| periplasmic binding protein [Prevotella buccalis ATCC 35310]
gi|281300259|gb|EFA92613.1| periplasmic binding protein [Prevotella buccalis ATCC 35310]
Length = 382
Score = 40.0 bits (92), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 25/48 (52%)
Query: 136 NFAPFGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVA 183
A + E PL RAEW+KF G+ E RA+ ++N V Y L A
Sbjct: 188 EMADYMETSPLGRAEWMKFYGMLFGQEKRADSLFNVVDSLYQGLKTTA 235
>gi|294675144|ref|YP_003575760.1| ABC transporter periplasmic substrate-binding protein [Prevotella
ruminicola 23]
gi|294473870|gb|ADE83259.1| ABC transporter, periplasmic substrate-binding protein [Prevotella
ruminicola 23]
Length = 374
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 24/39 (61%)
Query: 138 APFGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENY 176
A + E PL RAEW++F G+ E RA+ ++ +V NY
Sbjct: 182 ADYMEASPLARAEWLRFYGMLFGCEERADMLFQSVDNNY 220
>gi|255656925|ref|ZP_05402334.1| putative iron ABC transporter, substrate-binding protein
[Clostridium difficile QCD-23m63]
Length = 376
Score = 39.7 bits (91), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 85/218 (38%), Gaps = 32/218 (14%)
Query: 131 ACNFANFAPFGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPF 190
N+ + E P R EW + F + E A N + + V+
Sbjct: 184 GLNYVVDNEYKEQNPFGRMEWTSLIAAFYDKEDIATSELNKTVQK---IEEVSKKIKNKA 240
Query: 191 KPIVAWMEFYNG-VWSFTKEAFKLKYVEDAGGENVDSSINKMTYNISNSDDLEQLHAILC 249
KP V W Y G + K+++ ++ AGG N +SI+ +S +EQLH +
Sbjct: 241 KPKVVWASVYEGSAYIAPKDSYVDNMIKMAGGINACASIDSNEGRVS----IEQLHEVAK 296
Query: 250 TVDVVIDGTYTLEPANYTQSTFLENIDAADKSC-----FAFLTNQSLWRFDKRNQNSLAL 304
D+ + Y+ + S + N+D+ S + N +LW F A
Sbjct: 297 DADIFV---YS------SSSDYAPNLDSIKSSAPVLADLDVVKNGNLWVF--------AP 339
Query: 305 DWFDGAVSQPQLVLADLTEALFP-TGNYTITYFRNIAK 341
D++ +V + ++ DL E P T I ++ N K
Sbjct: 340 DYYQ-SVDKTDELIVDLVEMFHPGTTGEKIKHYINYDK 376
>gi|120435439|ref|YP_861125.1| ABC-type transporter periplasmic binding protein [Gramella forsetii
KT0803]
gi|117577589|emb|CAL66058.1| ABC-type transporter periplasmic binding protein [Gramella forsetii
KT0803]
Length = 377
Score = 39.7 bits (91), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 38/184 (20%), Positives = 75/184 (40%), Gaps = 13/184 (7%)
Query: 145 PLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEFYNGVW 204
PL +AEWIKF G E +A +++ +K+ Y+ +A K+ P V YN W
Sbjct: 191 PLGKAEWIKFFGALYGKEEKAAKIFQNIKDEYIKAKELA--KSAKSSPKVISGSMYNDNW 248
Query: 205 SFT-KEAFKLKYVEDAGGENVDSSINKMTYNISNSDDLEQLHAILCTVDVVIDGTYTLEP 263
+++ ++++DA + Y + D L A ++ D Y +
Sbjct: 249 YMPYGNSWQAQFIKDANANYL--------YADTEGDGSLSL-AFESVLEKAEDAEYWISS 299
Query: 264 ANYTQSTFLENIDAADKSCFAFLTNQSLWRFDKRNQNSLALDWFDGAVSQPQLVLADLTE 323
+T L N ++ F + ++ ++ + + +++ +P L+L DL
Sbjct: 300 GQFTSYEQLFN-ESEHYRRFKAVKDEKVYSVSLFQGETGGIIFYELGPQRPDLILKDLIS 358
Query: 324 ALFP 327
P
Sbjct: 359 IFHP 362
>gi|296452234|ref|ZP_06893941.1| ferrichrome-binding periplasmic protein [Clostridium difficile
NAP08]
gi|296877586|ref|ZP_06901617.1| iron ABC superfamily ATP binding cassette transporter,
substrate-binding protein [Clostridium difficile NAP07]
gi|296258921|gb|EFH05809.1| ferrichrome-binding periplasmic protein [Clostridium difficile
NAP08]
gi|296431437|gb|EFH17253.1| iron ABC superfamily ATP binding cassette transporter,
substrate-binding protein [Clostridium difficile NAP07]
Length = 379
Score = 39.7 bits (91), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 85/218 (38%), Gaps = 32/218 (14%)
Query: 131 ACNFANFAPFGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPF 190
N+ + E P R EW + F + E A N + + V+
Sbjct: 187 GLNYVVDNEYKEQNPFGRMEWTSLIAAFYDKEDIATSELNKTVQK---IEEVSKKIKNKA 243
Query: 191 KPIVAWMEFYNG-VWSFTKEAFKLKYVEDAGGENVDSSINKMTYNISNSDDLEQLHAILC 249
KP V W Y G + K+++ ++ AGG N +SI+ +S +EQLH +
Sbjct: 244 KPKVVWASVYEGSAYIAPKDSYVDNMIKMAGGINACASIDSNEGRVS----IEQLHEVAK 299
Query: 250 TVDVVIDGTYTLEPANYTQSTFLENIDAADKSC-----FAFLTNQSLWRFDKRNQNSLAL 304
D+ + Y+ + S + N+D+ S + N +LW F A
Sbjct: 300 DADIFV---YS------SSSDYAPNLDSIKSSAPVLADLDVVKNGNLWVF--------AP 342
Query: 305 DWFDGAVSQPQLVLADLTEALFP-TGNYTITYFRNIAK 341
D++ +V + ++ DL E P T I ++ N K
Sbjct: 343 DYYQ-SVDKTDELIVDLVEMFHPGTTGEKIKHYINYDK 379
>gi|304383828|ref|ZP_07366286.1| iron(III) ABC superfamily ATP binding cassette transporter
periplasmic iron-binding protein [Prevotella marshii DSM
16973]
gi|304335084|gb|EFM01356.1| iron(III) ABC superfamily ATP binding cassette transporter
periplasmic iron-binding protein [Prevotella marshii DSM
16973]
Length = 371
Score = 39.7 bits (91), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 81/200 (40%), Gaps = 34/200 (17%)
Query: 138 APFGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWM 197
A + E L RAEW+KF G+ E +A+ ++ V NY L + A K+K + ++
Sbjct: 182 ADYMETSALGRAEWMKFYGLLTGREQQADSLFAVVDANYKAL-KAEAAKSKVSRSVITER 240
Query: 198 EFYNGVWSFTKEAFKLKYVEDAGGENVDSSINKMTYNISNSDDLEQLHAILCTVDVVIDG 257
+ VW YV GG++V + K D++Q ++ + V+D
Sbjct: 241 KM-GAVW----------YV--PGGQSVPGRLLKDAGARYAFADVKQSGSLSLPFETVLDK 287
Query: 258 T---------YTLEPANYTQSTFLENIDAADKSCFAFLTNQSLWRFDK-RNQNSLALDWF 307
Y PANY + + + F T ++ + N+ + +F
Sbjct: 288 AGEADVWLYKYNDHPANYKELS----------AEFEGYTRMKAFKMKQIYGCNTSRIPYF 337
Query: 308 DGAVSQPQLVLADLTEALFP 327
+ A +P +L D+ + P
Sbjct: 338 EEAPFRPDYLLRDIIHIVHP 357
>gi|340349690|ref|ZP_08672696.1| hypothetical protein HMPREF9419_0927 [Prevotella nigrescens ATCC
33563]
gi|339610444|gb|EGQ15296.1| hypothetical protein HMPREF9419_0927 [Prevotella nigrescens ATCC
33563]
Length = 348
Score = 39.7 bits (91), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 24/42 (57%)
Query: 138 APFGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCL 179
A + E L RAEWIKF GI + A+ ++ V+ NYL L
Sbjct: 161 AEYMETSALGRAEWIKFYGILFGCQQSADSLFKVVESNYLAL 202
>gi|293373906|ref|ZP_06620248.1| periplasmic binding protein [Bacteroides ovatus SD CMC 3f]
gi|292631127|gb|EFF49763.1| periplasmic binding protein [Bacteroides ovatus SD CMC 3f]
Length = 377
Score = 39.7 bits (91), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 43/204 (21%), Positives = 89/204 (43%), Gaps = 18/204 (8%)
Query: 140 FGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEF 199
+ E+ PL +AEW+ L ++ + +++ + + Y L + + +P V
Sbjct: 187 YLEESPLGKAEWLVALAELTDSREKGIEIFREIPKRYQVLKALTESVEQ--RPTVMLNTP 244
Query: 200 YNGVWSF-TKEAFKLKYVEDAGGENVDSSINKMTYNISNSDDLEQLHAILCTVDVVID-- 256
+N W + +++ + V DAG + + NK N S LE + ++ D I+
Sbjct: 245 WNDSWVMPSTQSYMAQLVTDAGADYIYQE-NKS--NSSTPIGLETAYKLIQKADYWINVG 301
Query: 257 GTYTLEPANYTQSTFLENIDAADKSCFAFLTNQSLWRFDKRNQNSLALDWFDGAVSQPQL 316
TL+ F++ +K+ + N +L R + D+++ AV +P +
Sbjct: 302 MASTLDELKTVNPKFVDAKAVREKTVY----NNNL-----RTTPTGGNDYWESAVVRPDV 352
Query: 317 VLADLTEALFPT-GNYTITYFRNI 339
VL DL P + ++ Y+R++
Sbjct: 353 VLRDLIHIFHPELVSDSLYYYRHL 376
>gi|317502887|ref|ZP_07960985.1| conserved hypothetical protein [Prevotella salivae DSM 15606]
gi|315665993|gb|EFV05562.1| conserved hypothetical protein [Prevotella salivae DSM 15606]
Length = 390
Score = 39.7 bits (91), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%)
Query: 136 NFAPFGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVA 183
A + E+ L RAEW+KF G+ E A+ ++N VK NY L + A
Sbjct: 198 EMADYMEESSLGRAEWMKFYGMLFGREKAADSLFNKVKSNYERLMQKA 245
>gi|421746254|ref|ZP_16184062.1| Vitamin B12 ABC transporter, B12-binding component BtuF
[Cupriavidus necator HPC(L)]
gi|409775232|gb|EKN56747.1| Vitamin B12 ABC transporter, B12-binding component BtuF
[Cupriavidus necator HPC(L)]
Length = 429
Score = 39.7 bits (91), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 79/191 (41%), Gaps = 19/191 (9%)
Query: 142 EDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEFYN 201
E PL RAEW+K L + +N E RAN + +++ Y L +AA + +
Sbjct: 222 EPHPLGRAEWLKLLALLSNREQRANTQFASIETAYRRLAELAARAPARPAVMSGFAAGRQ 281
Query: 202 GVWSFTKEAFKLKYVEDAGGENV--DSSINKMTYNISNSDDLEQLHAILCTVDV---VID 256
+F + + + + DAGG V + Y E+++A +
Sbjct: 282 RFETFGADNQRARLIADAGGRYVLDGGGTGSLVYL-----PFERVYARGADAPAWLGTVG 336
Query: 257 GTYTLEPANYTQSTFLENIDAADKSCFAFLTNQSLWRFDKRNQNSLALDWFDGAVSQPQL 316
G +E + ++ L FA ++++ +D+ + A + D +++QP +
Sbjct: 337 GRADIE--AWVAASPLHG-------RFAAAASRNVHAWDRGYTGAWAYPYQDQSMTQPHV 387
Query: 317 VLADLTEALFP 327
LA+ AL P
Sbjct: 388 QLAEAIAALHP 398
>gi|406673775|ref|ZP_11080994.1| hypothetical protein HMPREF9700_01536 [Bergeyella zoohelcum CCUG
30536]
gi|405585720|gb|EKB59525.1| hypothetical protein HMPREF9700_01536 [Bergeyella zoohelcum CCUG
30536]
Length = 348
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 71/171 (41%), Gaps = 32/171 (18%)
Query: 74 KLLGLLSSMKGMTS-ESVASGCVLKLYQGGEIGLVNKSEPLQFSQYAAHFTTDSDQPQAC 132
++L L +KG+TS + + S V + Q G I ++ + + + S QP A
Sbjct: 77 EMLDALEQVKGVTSPQYIYSPSVHERIQKGTIQVIGNEQKIDIEKIL------SLQPDAV 130
Query: 133 NFANFAP---------------------FGEDGPLRRAEWIKFLGIFANAEARANQVYNA 171
F+N+ + E PL ++ +I+ G + A + YNA
Sbjct: 131 -FSNYIATQENVYSVLKNNGIEVIFIDEYLEQNPLEKSAYIQLFGALLGKKELAIKQYNA 189
Query: 172 VKENYLCLTRVAAGKTKPFKPIVAWMEFYNGVWSFT-KEAFKLKYVEDAGG 221
+++ Y L R K++ P+V E Y +W +F K + DAGG
Sbjct: 190 IEKKYNTL-REKVKKSQN-APLVMANEMYGNIWYMPGGNSFLAKIISDAGG 238
>gi|256838812|ref|ZP_05544322.1| iron(III) ABC transporter periplasmic iron-binding protein
[Parabacteroides sp. D13]
gi|298374360|ref|ZP_06984318.1| conserved hypothetical protein [Bacteroides sp. 3_1_19]
gi|301308034|ref|ZP_07213988.1| conserved hypothetical protein [Bacteroides sp. 20_3]
gi|423339701|ref|ZP_17317441.1| hypothetical protein HMPREF1059_03366 [Parabacteroides distasonis
CL09T03C24]
gi|256739731|gb|EEU53055.1| iron(III) ABC transporter periplasmic iron-binding protein
[Parabacteroides sp. D13]
gi|298268728|gb|EFI10383.1| conserved hypothetical protein [Bacteroides sp. 3_1_19]
gi|300833504|gb|EFK64120.1| conserved hypothetical protein [Bacteroides sp. 20_3]
gi|409229404|gb|EKN22280.1| hypothetical protein HMPREF1059_03366 [Parabacteroides distasonis
CL09T03C24]
Length = 372
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 41/86 (47%), Gaps = 3/86 (3%)
Query: 138 APFGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWM 197
A + E PL R EWI+F G+ E A+ ++ ++ YL L + A +P V
Sbjct: 181 ADYMEAFPLGRTEWIRFYGLLFGKEEMADSIFKETEQAYLSLKDLTANIDN--RPTVLSE 238
Query: 198 EFYNGVWSF-TKEAFKLKYVEDAGGE 222
+ + W + +++ +EDAG +
Sbjct: 239 KKFGSSWYVPSGDSYMAHLIEDAGAD 264
>gi|262382691|ref|ZP_06075828.1| iron(III) ABC transporter periplasmic iron-binding protein
[Bacteroides sp. 2_1_33B]
gi|262295569|gb|EEY83500.1| iron(III) ABC transporter periplasmic iron-binding protein
[Bacteroides sp. 2_1_33B]
Length = 372
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 41/86 (47%), Gaps = 3/86 (3%)
Query: 138 APFGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWM 197
A + E PL R EWI+F G+ E A+ ++ ++ YL L + A +P V
Sbjct: 181 ADYMEAFPLGRTEWIRFYGLLFGKEEMADSIFKETEQAYLSLKDLTANIDN--RPTVLSE 238
Query: 198 EFYNGVWSF-TKEAFKLKYVEDAGGE 222
+ + W + +++ +EDAG +
Sbjct: 239 KKFGSSWYVPSGDSYMAHLIEDAGAD 264
>gi|345883968|ref|ZP_08835386.1| hypothetical protein HMPREF0666_01562 [Prevotella sp. C561]
gi|345043174|gb|EGW47255.1| hypothetical protein HMPREF0666_01562 [Prevotella sp. C561]
Length = 370
Score = 39.3 bits (90), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 28/47 (59%)
Query: 138 APFGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAA 184
A + E L RAEW+KF G+ E A+ ++ V++NY L++ A+
Sbjct: 181 ADYMETSALGRAEWMKFYGLLYGKEHEADSLFTVVEQNYKSLSKQAS 227
>gi|423316877|ref|ZP_17294782.1| hypothetical protein HMPREF9699_01353 [Bergeyella zoohelcum ATCC
43767]
gi|405582629|gb|EKB56624.1| hypothetical protein HMPREF9699_01353 [Bergeyella zoohelcum ATCC
43767]
Length = 348
Score = 39.3 bits (90), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 71/171 (41%), Gaps = 32/171 (18%)
Query: 74 KLLGLLSSMKGMTS-ESVASGCVLKLYQGGEIGLVNKSEPLQFSQYAAHFTTDSDQPQAC 132
++L L +KG+TS + + S V + Q G I ++ + + + S QP A
Sbjct: 77 EMLDALDQVKGVTSPQYIYSPSVHERIQKGTIQVIGNEQKIDIEKIL------SLQPDAV 130
Query: 133 NFANFAP---------------------FGEDGPLRRAEWIKFLGIFANAEARANQVYNA 171
F+N+ + E PL ++ +I+ G + A + YNA
Sbjct: 131 -FSNYIATQENVYSVLKNNGIEVIFIDEYLEQNPLEKSAYIQLFGALLGKKELAIKQYNA 189
Query: 172 VKENYLCLTRVAAGKTKPFKPIVAWMEFYNGVWSFT-KEAFKLKYVEDAGG 221
+++ Y L R K++ P+V E Y +W +F K + DAGG
Sbjct: 190 IEKKYNTL-REKVKKSQN-APLVMTNEMYGNIWYMPGGNSFLAKIISDAGG 238
>gi|255012729|ref|ZP_05284855.1| iron(III) ABC transporter periplasmic iron-binding protein
[Bacteroides sp. 2_1_7]
gi|410102342|ref|ZP_11297269.1| hypothetical protein HMPREF0999_01041 [Parabacteroides sp. D25]
gi|409239064|gb|EKN31852.1| hypothetical protein HMPREF0999_01041 [Parabacteroides sp. D25]
Length = 372
Score = 39.3 bits (90), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 41/86 (47%), Gaps = 3/86 (3%)
Query: 138 APFGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWM 197
A + E PL R EWI+F G+ E A+ ++ ++ YL L + A +P V
Sbjct: 181 ADYMEAFPLGRTEWIRFYGLLFGKEEMADSIFKETEQAYLSLKDLTANIDN--RPTVLSE 238
Query: 198 EFYNGVWSF-TKEAFKLKYVEDAGGE 222
+ + W + +++ +EDAG +
Sbjct: 239 KKFGSSWYVPSGDSYMAHLIEDAGAD 264
>gi|333383003|ref|ZP_08474666.1| hypothetical protein HMPREF9455_02832 [Dysgonomonas gadei ATCC
BAA-286]
gi|332828099|gb|EGK00817.1| hypothetical protein HMPREF9455_02832 [Dysgonomonas gadei ATCC
BAA-286]
Length = 377
Score = 39.3 bits (90), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 42/95 (44%), Gaps = 3/95 (3%)
Query: 140 FGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEF 199
+ E PL RAEWI++ +F E A+ ++ ++NY + AG +P V
Sbjct: 187 YTESHPLGRAEWIRYYSLFIGKEQLADSLFAITEKNYNAVKDAVAGTAN--RPSVFTDMR 244
Query: 200 YNGVWSFT-KEAFKLKYVEDAGGENVDSSINKMTY 233
Y W+ ++F + D+G S N TY
Sbjct: 245 YQNKWNMPGGKSFMANMLSDSGASYCWSDDNSTTY 279
>gi|303236623|ref|ZP_07323204.1| periplasmic binding protein [Prevotella disiens FB035-09AN]
gi|302483127|gb|EFL46141.1| periplasmic binding protein [Prevotella disiens FB035-09AN]
Length = 371
Score = 39.3 bits (90), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 28/46 (60%)
Query: 138 APFGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVA 183
A + E L RAEW+KF GI + +A+ +++ V+++YL L A
Sbjct: 184 AEYMETSALGRAEWMKFYGILFGCQQKADSLFSVVEKSYLALKEKA 229
>gi|359406891|ref|ZP_09199536.1| periplasmic binding protein [Prevotella stercorea DSM 18206]
gi|357554691|gb|EHJ36403.1| periplasmic binding protein [Prevotella stercorea DSM 18206]
Length = 360
Score = 38.9 bits (89), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 41/88 (46%), Gaps = 3/88 (3%)
Query: 138 APFGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWM 197
A + E L RAEW++F + E A+ ++ ++ NY T + K + P V
Sbjct: 171 ADYMETSALGRAEWMRFYAMLIGKENTADSLFTTIEHNY--NTIIEHNKKQKNHPKVLTE 228
Query: 198 EFYNGVWSFTKEAFKL-KYVEDAGGENV 224
+GVW + K ++DAGG+ +
Sbjct: 229 RVTSGVWYCPGGNSSMAKLIKDAGGDYI 256
>gi|374326584|ref|YP_005084784.1| periplasmic binding protein [Pyrobaculum sp. 1860]
gi|356641853|gb|AET32532.1| periplasmic binding protein [Pyrobaculum sp. 1860]
Length = 447
Score = 38.9 bits (89), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
Query: 140 FGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEF 199
F E L RAEWIKF+ F N +V+N V+ + L + A +P VAW
Sbjct: 271 FQEAEALGRAEWIKFIAPFYNLTWVGVRVFNDVESRWKSLASLVADLDRPR---VAWFII 327
Query: 200 YNGV 203
Y GV
Sbjct: 328 YGGV 331
>gi|336122212|ref|YP_004576987.1| Fe3+-hydroxamate ABC transporter periplasmic component-like protein
[Methanothermococcus okinawensis IH1]
gi|334856733|gb|AEH07209.1| ABC-type Fe3+-hydroxamate transport system periplasmic
component-like protein [Methanothermococcus okinawensis
IH1]
Length = 451
Score = 38.9 bits (89), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Query: 138 APFGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPI-VAW 196
A + ED L R EW+K F N E AN+ + V++ L + R+ GK +P+ VAW
Sbjct: 254 AEYLEDSYLARCEWVKMFAAFYNKEDVANKYFTKVEKKALNVRRLTRGK----EPVSVAW 309
>gi|445112652|ref|ZP_21377207.1| hypothetical protein HMPREF0662_00247 [Prevotella nigrescens F0103]
gi|444841481|gb|ELX68496.1| hypothetical protein HMPREF0662_00247 [Prevotella nigrescens F0103]
Length = 372
Score = 38.9 bits (89), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 24/42 (57%)
Query: 138 APFGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCL 179
A + E L RAEWIKF GI + A+ ++ V+ NYL L
Sbjct: 185 AEYMETSALGRAEWIKFYGILFGCQQSADSLFKVVEGNYLAL 226
>gi|327313590|ref|YP_004329027.1| putative lipoprotein [Prevotella denticola F0289]
gi|326944401|gb|AEA20286.1| putative lipoprotein [Prevotella denticola F0289]
Length = 373
Score = 38.9 bits (89), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 138 APFGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIV 194
A + E L RAEW+KF G+ + A+ +++ V++NY+ L++ A K+K + I+
Sbjct: 184 ADYMERSALGRAEWMKFYGLLYGKKREADSLFSVVEQNYMDLSK-KARKSKAARSIL 239
>gi|397626120|gb|EJK68036.1| hypothetical protein THAOC_10832, partial [Thalassiosira oceanica]
Length = 1445
Score = 38.5 bits (88), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 27/49 (55%)
Query: 293 RFDKRNQNSLALDWFDGAVSQPQLVLADLTEALFPTGNYTITYFRNIAK 341
+ D N SL++DW G QP +V +LT A + +G ++ Y R + +
Sbjct: 1055 QLDNVNLVSLSIDWMSGLHEQPVVVAVELTNATYASGRMSLDYIRRLKQ 1103
>gi|294951759|ref|XP_002787120.1| hypothetical protein Pmar_PMAR015415 [Perkinsus marinus ATCC 50983]
gi|239901752|gb|EER18916.1| hypothetical protein Pmar_PMAR015415 [Perkinsus marinus ATCC 50983]
Length = 675
Score = 38.5 bits (88), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 43/81 (53%), Gaps = 6/81 (7%)
Query: 142 EDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWM--EF 199
E PL R WI F+G+ + + A + + + +Y+ + +AA + +KP V WM F
Sbjct: 229 EASPLGRLTWILFMGLLTDTYSTAASHFLSTRSSYMQASALAARAS--YKPSV-WMGSAF 285
Query: 200 YNGVWSFTK-EAFKLKYVEDA 219
VW F K +++ + +EDA
Sbjct: 286 QGKVWYFPKPDSYVARMMEDA 306
>gi|154489800|ref|ZP_02030061.1| hypothetical protein PARMER_00028 [Parabacteroides merdae ATCC
43184]
gi|423724512|ref|ZP_17698657.1| hypothetical protein HMPREF1078_02556 [Parabacteroides merdae
CL09T00C40]
gi|154089525|gb|EDN88569.1| hypothetical protein PARMER_00028 [Parabacteroides merdae ATCC
43184]
gi|409237493|gb|EKN30292.1| hypothetical protein HMPREF1078_02556 [Parabacteroides merdae
CL09T00C40]
Length = 375
Score = 38.5 bits (88), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 33/148 (22%), Positives = 62/148 (41%), Gaps = 10/148 (6%)
Query: 77 GLLSSMKGMTSESVASGCVLKLYQGGEIGLVNKSEPLQFSQYAAHFTTDSDQPQACNFAN 136
GL + E+ A + + +G E+ +V+ P Q S Y +
Sbjct: 131 GLKAGRIADMGEATAPNVEMMIDKGAELVIVS---PFQNSGYGPV------EKLGIPIIE 181
Query: 137 FAPFGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAW 196
A + E PL R EWI+F G+ EA A+ ++ +++YL L ++ P +++
Sbjct: 182 GADYMESLPLGRTEWIRFYGMLFGKEALADSIFRQTEKSYLDLKQLVTADM-PHPTVISE 240
Query: 197 MEFYNGVWSFTKEAFKLKYVEDAGGENV 224
+F + +++ DAG + V
Sbjct: 241 KKFGASWFMPAGDSYIANMYADAGADYV 268
>gi|325854290|ref|ZP_08171489.1| putative lipoprotein [Prevotella denticola CRIS 18C-A]
gi|325484084|gb|EGC87018.1| putative lipoprotein [Prevotella denticola CRIS 18C-A]
Length = 373
Score = 38.5 bits (88), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 138 APFGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIV 194
A + E L RAEW+KF G+ + A+ +++ V++NY+ L++ A K+K + I+
Sbjct: 184 ADYMERSALGRAEWMKFYGLLYGKKREADSLFSVVEQNYMDLSK-KARKSKAARSIL 239
>gi|315426000|dbj|BAJ47648.1| iron complex ABC transporter substrate-binding protein [Candidatus
Caldiarchaeum subterraneum]
gi|315426035|dbj|BAJ47682.1| iron complex ABC transporter substrate-binding protein [Candidatus
Caldiarchaeum subterraneum]
gi|343484844|dbj|BAJ50498.1| iron complex ABC transporter substrate-binding protein [Candidatus
Caldiarchaeum subterraneum]
Length = 412
Score = 38.5 bits (88), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 56/121 (46%), Gaps = 8/121 (6%)
Query: 142 EDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLT---RVAAGKTKPFKPIVAWME 198
ED L R EWIKF+ +F E A++V++ V+++ L + + P P V W
Sbjct: 225 EDDLLGRFEWIKFVSVFFGLEDVADKVFSYVEQSVLLTSLRAKALVAHGVP-APKVVWFS 283
Query: 199 FYNG-VWSFTKEAFKLKYVEDAGGENVDSSINKMTYNISNSDDLEQLHAILCTVDVVIDG 257
Y G V+ ++ K ++D G V S I + S + E+L A DV++
Sbjct: 284 VYRGTVYVAGGGSYVAKALKDLGASYVFSDIAS---SGSATVTPEELVARALDADVIVLS 340
Query: 258 T 258
T
Sbjct: 341 T 341
>gi|323344244|ref|ZP_08084470.1| hypothetical protein HMPREF0663_11006 [Prevotella oralis ATCC
33269]
gi|323094973|gb|EFZ37548.1| hypothetical protein HMPREF0663_11006 [Prevotella oralis ATCC
33269]
Length = 375
Score = 38.5 bits (88), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 24/46 (52%)
Query: 138 APFGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVA 183
A + E L RAEW++F G+ E RA+ ++ V Y L R A
Sbjct: 185 ADYMETSALGRAEWMRFYGMLYGCETRADSLFRVVDSTYTALKRAA 230
>gi|404447870|ref|ZP_11012864.1| phosphoenolpyruvate carboxylase [Indibacter alkaliphilus LW1]
gi|403766456|gb|EJZ27328.1| phosphoenolpyruvate carboxylase [Indibacter alkaliphilus LW1]
Length = 851
Score = 38.5 bits (88), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 16/60 (26%), Positives = 35/60 (58%)
Query: 53 RIKSFVIPMSNYSVDTDFFPGKLLGLLSSMKGMTSESVASGCVLKLYQGGEIGLVNKSEP 112
++K+F + ++ + T F+PG +LG+++ ++ ++ L L Q G+ G +NK +P
Sbjct: 130 KLKTFSVRLTLTAHPTQFYPGNVLGIITDLEAAIRDNDLGNINLLLQQLGKTGFINKEKP 189
>gi|150010000|ref|YP_001304743.1| iron(III) ABC transporter periplasmic iron-binding protein
[Parabacteroides distasonis ATCC 8503]
gi|423333576|ref|ZP_17311357.1| hypothetical protein HMPREF1075_03008 [Parabacteroides distasonis
CL03T12C09]
gi|149938424|gb|ABR45121.1| iron(III) ABC transporter periplasmic iron-binding protein
[Parabacteroides distasonis ATCC 8503]
gi|409227524|gb|EKN20421.1| hypothetical protein HMPREF1075_03008 [Parabacteroides distasonis
CL03T12C09]
Length = 372
Score = 38.5 bits (88), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 3/86 (3%)
Query: 138 APFGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWM 197
A + E PL R EWI+F G+ E A+ ++ ++ YL L + K +P V
Sbjct: 181 ADYMEAFPLGRTEWIRFYGLLFGKEEMADSIFKETEQAYLSLKNLTVNIDK--RPTVLSE 238
Query: 198 EFYNGVWSF-TKEAFKLKYVEDAGGE 222
+ + W +++ EDAG +
Sbjct: 239 KKFGSSWYIPAGDSYMAHLFEDAGAD 264
>gi|238924291|ref|YP_002937807.1| iron compound ABC transporter, periplasmic iron compound-binding
protein, putative [Eubacterium rectale ATCC 33656]
gi|238875966|gb|ACR75673.1| iron compound ABC transporter, periplasmic iron compound-binding
protein, putative [Eubacterium rectale ATCC 33656]
Length = 401
Score = 38.5 bits (88), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 55/121 (45%), Gaps = 24/121 (19%)
Query: 127 DQPQACNFANFAPFGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGK 186
D P ++++ E+ PL R EW+KF G + + +A++++N E + R+A
Sbjct: 193 DIPSIIEYSSY----EEEPLGRVEWVKFFGALTDRDEKADELFN---EQVDIVNRIAKTD 245
Query: 187 TKP---FKPIVAWMEFY---NGVWSFTKEA-FKLKYVEDAGGENVDSSINKMTYNISNSD 239
T +P VA+ FY NG K + K + AGG K ++ SN D
Sbjct: 246 TAANDDSRPTVAF--FYITSNGQVQVRKSTDYVPKMISLAGG--------KYIFDASNDD 295
Query: 240 D 240
D
Sbjct: 296 D 296
>gi|374599939|ref|ZP_09672941.1| ABC-type transporter, periplasmic subunit [Myroides odoratus DSM
2801]
gi|423325100|ref|ZP_17302941.1| hypothetical protein HMPREF9716_02298 [Myroides odoratimimus CIP
103059]
gi|373911409|gb|EHQ43258.1| ABC-type transporter, periplasmic subunit [Myroides odoratus DSM
2801]
gi|404607109|gb|EKB06643.1| hypothetical protein HMPREF9716_02298 [Myroides odoratimimus CIP
103059]
Length = 379
Score = 38.5 bits (88), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Query: 142 EDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEFYN 201
E PL +AEWIK G+ + E ANQ + + +Y + K +P V Y+
Sbjct: 190 EQNPLGKAEWIKLFGVLYDKEKEANQFFEDIVTDYTAALELV--KNVKSQPTVVSGVMYS 247
Query: 202 GVW 204
VW
Sbjct: 248 DVW 250
>gi|354603882|ref|ZP_09021875.1| hypothetical protein HMPREF9450_00790 [Alistipes indistinctus YIT
12060]
gi|353348314|gb|EHB92586.1| hypothetical protein HMPREF9450_00790 [Alistipes indistinctus YIT
12060]
Length = 382
Score = 38.5 bits (88), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 78/203 (38%), Gaps = 19/203 (9%)
Query: 142 EDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEFYN 201
E+ PL RAEWI G F A +++++ Y + +G K +P V +
Sbjct: 193 ENNPLGRAEWITVFGEFTGRRELARTLFDSISNEYNRAKALVSGVEK--RPEVMLNAPWQ 250
Query: 202 GVWSFTKE-AFKLKYVEDAGGENVDSSINKMTYNISNSDDLEQLHAILCTVDVVI--DGT 258
W + ++ ++ +EDAGG + D +Q I V
Sbjct: 251 DSWFVPGDRSYMVRLLEDAGGNYACRGV-----------DSDQSRPISTETAFVAASQSD 299
Query: 259 YTLEPANYTQSTFLENIDAADKSCFAFLTNQSLWRFDKRNQNSLALDWFDGAVSQPQLVL 318
+ L P T L ++ S + N +++ + R D+++ + P L
Sbjct: 300 FWLSPGTATSLAELNAMNPRFGS-IPPVRNGNVYNNNARTTPEGGSDFWESGSAYPDRTL 358
Query: 319 ADLTEALFPT--GNYTITYFRNI 339
DL L P + T+ YFR++
Sbjct: 359 KDLIHILHPELLPDRTLYYFRHL 381
>gi|371777152|ref|ZP_09483474.1| iron(III) ABC transporter periplasmic iron-binding protein
[Anaerophaga sp. HS1]
Length = 376
Score = 38.5 bits (88), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 37/82 (45%), Gaps = 3/82 (3%)
Query: 142 EDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEFYN 201
E PL RAEW+ F F + E A + + ++ Y + A FKP + YN
Sbjct: 188 ESSPLGRAEWLIFFSAFFDKEKVAIREFKNIERQYNSIAVKANAVN--FKPDILTGHIYN 245
Query: 202 GVWSF-TKEAFKLKYVEDAGGE 222
VW +++ + EDAG +
Sbjct: 246 DVWYMPAGDSYMAQLFEDAGAD 267
>gi|340353014|ref|ZP_08675845.1| ABC superfamily ATP binding cassette transporter, binding protein
[Prevotella pallens ATCC 700821]
gi|339611652|gb|EGQ16472.1| ABC superfamily ATP binding cassette transporter, binding protein
[Prevotella pallens ATCC 700821]
Length = 372
Score = 38.1 bits (87), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 25/46 (54%)
Query: 138 APFGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVA 183
A + E L RAEW+KF GI + A+ ++ V+ NYL L A
Sbjct: 185 AEYMETSALGRAEWMKFYGILFGCKQTADSLFKVVEHNYLSLKAKA 230
>gi|452845854|gb|EME47787.1| glycoside hydrolase family 79 protein [Dothistroma septosporum
NZE10]
Length = 527
Score = 38.1 bits (87), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 46/102 (45%), Gaps = 19/102 (18%)
Query: 170 NAVKENYLCLTRVAAGKTKPFKPIVAWMEFYNGVWSFTKEAFKLKYVEDAGGENVDSSIN 229
+A++ NY+ TR+AA FKP VAW++ K L E +N
Sbjct: 279 SALQSNYMNHTRIAA-TLDTFKPAVAWLKA-------NKPNIPLHLAE----------VN 320
Query: 230 KMTYNISNSDDLEQLHAILCTVDVVIDG-TYTLEPANYTQST 270
TY+ NSD L + L VD +I G T ++ N QST
Sbjct: 321 SNTYSSGNSDTLGVFGSALWLVDYMIYGMTLNIKRMNVQQST 362
>gi|295133904|ref|YP_003584580.1| ABC transporter substrate-binding protein [Zunongwangia profunda
SM-A87]
gi|294981919|gb|ADF52384.1| ABC-type transporter periplasmic binding protein [Zunongwangia
profunda SM-A87]
Length = 379
Score = 38.1 bits (87), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 42/202 (20%), Positives = 86/202 (42%), Gaps = 17/202 (8%)
Query: 142 EDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEFYN 201
E L +AEWIKF G + A+ ++ ++ NY ++A +T KP V Y
Sbjct: 189 ESSALGKAEWIKFFGALYDESKAADSIFQRIESNYQSAKKLA--ETAENKPTVLSGAMYK 246
Query: 202 GVWSFT-KEAFKLKYVEDAGGENVDSSINKMTYNISNSDDLEQLHAILCTVDVVIDGTYT 260
W +++ + ++DA E + + K + ++S S + +D D +
Sbjct: 247 DQWYLPYGNSWQAQMIKDANAEYLWAD-TKGSGSLSLSFE--------SVLDKAQDADFW 297
Query: 261 LEPANYTQ-STFLENIDAADKSCFAFLTNQSLWRFDKRNQNSLALDWFDGAVSQPQLVLA 319
+ +T S LE + S F + ++ ++ + + +++ ++P L+L
Sbjct: 298 ISAGQFTSYSGMLEQ--SQHYSQFKAVQDKKVFSVSMSKGETGGVIFYELGPNRPDLILK 355
Query: 320 DLTEALFPT--GNYTITYFRNI 339
DL P NY T+++ +
Sbjct: 356 DLISIFHPQLLENYQPTFYKAL 377
>gi|258649195|ref|ZP_05736664.1| putative lipoprotein [Prevotella tannerae ATCC 51259]
gi|260850459|gb|EEX70328.1| putative lipoprotein [Prevotella tannerae ATCC 51259]
Length = 374
Score = 38.1 bits (87), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 37/84 (44%), Gaps = 6/84 (7%)
Query: 125 DSDQPQ----ACNFANFAPFGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLT 180
D D+P+ A + E L RAEWIKF G+ A+ ++ V++ Y LT
Sbjct: 166 DVDRPELRKTGIPIIECADYLETSALGRAEWIKFFGLLFGKGQAADSIFRQVEDRYQSLT 225
Query: 181 RVAAGKTKPFKPIVAWMEFYNGVW 204
R +T +P + GVW
Sbjct: 226 RQV--RTLRQRPSLLVETKQGGVW 247
>gi|259157188|gb|ACV96805.1| hypothetical protein [uncultured bacterium]
Length = 128
Score = 38.1 bits (87), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 28/55 (50%)
Query: 134 FANFAPFGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTK 188
F A + E PL RAEW+KF G+ +A+ ++ V ++Y L AA K
Sbjct: 7 FVECAEYMEPSPLARAEWMKFYGLLFGEYDKADSLFQVVDQHYQTLKAQAAKAGK 61
>gi|373495079|ref|ZP_09585670.1| hypothetical protein HMPREF0380_01308 [Eubacterium infirmum F0142]
gi|371966533|gb|EHO84021.1| hypothetical protein HMPREF0380_01308 [Eubacterium infirmum F0142]
Length = 390
Score = 38.1 bits (87), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 44/89 (49%), Gaps = 3/89 (3%)
Query: 142 EDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEFYN 201
E PL R EWIKF G+ + E AN+V++ E + ++ K+ K I ++
Sbjct: 203 ESHPLGRTEWIKFFGVLLDKEELANKVFD---EEAAKVEKLENTKSTGKKVIFFYVNTRG 259
Query: 202 GVWSFTKEAFKLKYVEDAGGENVDSSINK 230
V ++ + + + ++ AGG+ S + K
Sbjct: 260 NVVTYKSKGYVPEMIKIAGGKYAFSDLGK 288
>gi|15668823|ref|NP_247626.1| hypothetical protein MJ_0642 [Methanocaldococcus jannaschii DSM
2661]
gi|2496092|sp|Q58059.1|Y642_METJA RecName: Full=Uncharacterized protein MJ0642
gi|1591354|gb|AAB98644.1| hypothetical protein MJ_0642 [Methanocaldococcus jannaschii DSM
2661]
Length = 333
Score = 38.1 bits (87), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 46/93 (49%), Gaps = 5/93 (5%)
Query: 140 FGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEF 199
+ E L + EWIKF F N +A +V+N + E + + ++ +KP+VA+ +
Sbjct: 144 YKEPKFLGKMEWIKFYASFYNKYKKAEKVFNKIIEEKRRILKSLNSRSIKYKPVVAFFGY 203
Query: 200 Y-NGVWSFTKEAFKLKYVEDAGG----ENVDSS 227
+ N + + K + ++ + G ENV+ +
Sbjct: 204 HKNQPYIYGKSHYIPNWIREIKGNYLFENVEGT 236
>gi|373488461|ref|ZP_09579126.1| periplasmic binding protein [Holophaga foetida DSM 6591]
gi|372006786|gb|EHP07418.1| periplasmic binding protein [Holophaga foetida DSM 6591]
Length = 414
Score = 37.7 bits (86), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 84/216 (38%), Gaps = 23/216 (10%)
Query: 123 TTDS--DQPQACNFANF-----APFGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKEN 175
T DS D+ Q A F A + E+ PL RAEWIKF+ F + +A A + ++
Sbjct: 191 TGDSSLDKHQKLGEAGFKVALCADYMENTPLGRAEWIKFVAAFLDRDAEAEAHFAKLEAR 250
Query: 176 YLCLTRVAAGKTKPFKPIVAWMEFYNGVW-SFTKEAFKLKYVEDAGGENV---DSSINKM 231
Y + A + +P V Y G W + ++ Y+ DAG + D +
Sbjct: 251 YEA--QKALARKALHRPTVLCEMDYRGSWYAPGGGSYLAAYIRDAGATYLLGDDPNPGSR 308
Query: 232 TYNISNSDDLEQLHAILCTVDVVIDGTYTLEPANYTQSTFLENIDAADKSCFAFLTNQSL 291
I D + +A + + +TL+ T + + A + F T L
Sbjct: 309 ALKIETVLDRAR-NADFWMLHMTGSSLHTLQEMKDTDPRY--GLFKAFREGKVFTTGARL 365
Query: 292 WRFDKRNQNSLALDWFDGAVSQPQLVLADLTEALFP 327
+ D+++ + P LVLADL P
Sbjct: 366 GPWG-------GSDYWENGSANPDLVLADLIAIFHP 394
>gi|344204583|ref|YP_004789726.1| ABC transporter periplasmic protein [Muricauda ruestringensis DSM
13258]
gi|343956505|gb|AEM72304.1| ABC-type transporter, periplasmic subunit [Muricauda ruestringensis
DSM 13258]
Length = 383
Score = 37.7 bits (86), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 80/188 (42%), Gaps = 15/188 (7%)
Query: 142 EDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKPIVAWMEFYN 201
E PL +AEW+KF F E + ++ V+ +Y +A +P V Y
Sbjct: 194 EQTPLGKAEWVKFFAPFFQKEKLGDSIFVEVESSYKQAAALAKKAKS--RPTVLTGGLYK 251
Query: 202 GVWSFT-KEAFKLKYVEDAGGENVDSSINKMTYNISNSDDLEQLHAILCTV-DVVIDGTY 259
VW ++ ++++DA N D Y SN+++ + L +V + D Y
Sbjct: 252 DVWYVAGGNSWMAQFLKDA---NAD-------YLWSNTEETGSIGLSLESVLENAQDAEY 301
Query: 260 TLEPANYTQSTFLENIDAADKSCFAFLTNQSLWRFDKRNQNSLALDWFDGAVSQPQLVLA 319
P+ T+ + L + + AF TN+ ++ + L +++ A +P +VL
Sbjct: 302 WFNPSAETKYSELTEANPHYQQFSAF-TNKKVYSNAIEKGETGGLIFYELAPHRPDIVLM 360
Query: 320 DLTEALFP 327
D + + P
Sbjct: 361 DFIKIVHP 368
>gi|373488462|ref|ZP_09579127.1| periplasmic binding protein [Holophaga foetida DSM 6591]
gi|372006787|gb|EHP07419.1| periplasmic binding protein [Holophaga foetida DSM 6591]
Length = 424
Score = 37.7 bits (86), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 73/205 (35%), Gaps = 28/205 (13%)
Query: 133 NFANFAPFGEDGPLRRAEWIKFLGIFANAEARANQVYNAVKENYLCLTRVAAGKTKPFKP 192
N A A E+ PL RAEWIKF+ F + +A A + ++ Y A P
Sbjct: 219 NVAICAESMENDPLGRAEWIKFMAAFLDRDAEAEAHFAKLEVRYEAQKAQARKAA--HHP 276
Query: 193 IVAWMEFYNGVW-SFTKEAFKLKYVEDAGGENVDSSINKMTYNISNSDDLEQLHAILCTV 251
V G W + ++ Y+ DAG + + + Y D +
Sbjct: 277 TVLCGMNARGAWFAPGGGSYVAAYIRDAGADYILKDDPRPGYRPIKID---------AVL 327
Query: 252 DVVIDGTYTLEPANYTQSTFLENIDAADKSCFAFL---------TNQSLWRFDKRNQNSL 302
D D + + + L+N+ D C F TN L R N
Sbjct: 328 DRARDADFWMLHMTDSSLNSLQNLKDIDPRCTLFRAFREGKVFNTNACL---GPRGGN-- 382
Query: 303 ALDWFDGAVSQPQLVLADLTEALFP 327
D+++ + P LVLADL P
Sbjct: 383 --DYWENGSANPDLVLADLISIFHP 405
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.319 0.134 0.402
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,878,536,387
Number of Sequences: 23463169
Number of extensions: 242633247
Number of successful extensions: 464686
Number of sequences better than 100.0: 399
Number of HSP's better than 100.0 without gapping: 203
Number of HSP's successfully gapped in prelim test: 196
Number of HSP's that attempted gapping in prelim test: 464238
Number of HSP's gapped (non-prelim): 452
length of query: 369
length of database: 8,064,228,071
effective HSP length: 144
effective length of query: 225
effective length of database: 8,980,499,031
effective search space: 2020612281975
effective search space used: 2020612281975
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 77 (34.3 bits)